##maf version=1 scoring=blastz
a score=0.000000
s hg38.chrUn_KI270753v1                                          0 23 +     62944 GAAC--ACCTAAACGCCCTA-AA-----TT--C
s Acinonyx_jubatus.LLWD01001279.1                           816143 24 -   1699592 GAGC--ACCTAATCCacctt-ta---aatt---
i Acinonyx_jubatus.LLWD01001279.1                        N 0 I 2
s Acomys_cahirinus.AcoCah_scaffold_12655                     65814 25 +     87051 TAAT--TCCTAAACTGCCTT-AAA---ATT--C
i Acomys_cahirinus.AcoCah_scaffold_12655                 N 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506098 24 -  29979442 GAGC--ACCTAAACCacctt-ta---aatt---
i Ailuropoda_melanoleuca.LNAT01000098.1                  N 0 I 2
s Ailurus_fulgens.LNAC01001112.1                             74389 24 -    347723 GAGC--ACCTAAACCacctt-ta---aatt---
i Ailurus_fulgens.LNAC01001112.1                         N 0 I 2
s Allactaga_bullata.AllBul_scaffold_9566                     64135 25 -     89534 GAGT--GTCTAAACTGCCTT-AAA---ATC--C
i Allactaga_bullata.AllBul_scaffold_9566                 N 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    8477 24 -     52922 GAAC--ACCTTAACGCCCTATTA-----TT--C
i Allenopithecus_nigroviridis.k141_3361533               N 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          8402 24 -     28001 GAAC--ACCTCAACGCCCTATTA-----TT--C
i Allochrocebus_lhoesti.k141_4309873                     N 0 C 0
s Allochrocebus_preussi.k141_310680                           8528 24 -      9772 GAAC--ACCTCAACGCCCTATTA-----TT--C
i Allochrocebus_preussi.k141_310680                      N 0 C 0
s Allochrocebus_solatus.k141_2289504                         19640 24 +     20096 GAAC--ACCTCAACGCCCTATTA-----TT--C
i Allochrocebus_solatus.k141_2289504                     N 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          674424 24 -   2318259 GAGT--ACCTAAACCACCTT-AAA---ATT---
i Ammotragus_lervia.NIVO01071767.1                       N 0 I 2
s Anoura_caudifer.AnoCau_scaffold_1412                      182304 24 +    412891 GAGG--ACCTGAACTACCCT-AGA---ATT---
i Anoura_caudifer.AnoCau_scaffold_1412                   N 0 I 2
s Antilocapra_americana.AntAmePen_scaffold_12469             96874 24 -    100397 GAGT--ACCTAAACCACCTT-AAA---ATT---
i Antilocapra_americana.AntAmePen_scaffold_12469         N 0 I 2
s Aplodontia_rufa.AprRuf_scaffold_68852                       6378 25 +     20879 GAGC--ACCTAACCTGCCTT-AAA---ATT--C
i Aplodontia_rufa.AprRuf_scaffold_68852                  N 0 C 0
s Arctocebus_calabarensis.k141_1894080                        5133 25 +      5713 AAAC--ACCTAAACCATCTT-AT-----TTTTT
i Arctocebus_calabarensis.k141_1894080                   N 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  1656 24 +     43469 GAGG--ACCTGGACCACCCT-CGA---GTT---
i Artibeus_jamaicensis.ArtJam_scaffold_25439             N 0 I 2
s Avahi_laniger.k141_765380                                  48351 25 -     92717 GAGC--ATCTAAACCACCTT-AA-----AATGC
i Avahi_laniger.k141_765380                              N 0 C 0
s Avahi_peyrierasi.k141_1424874                              48948 25 +     85213 GAGC--ATCTAAACCACCTT-AA-----AATGC
i Avahi_peyrierasi.k141_1424874                          N 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15190716 24 +  23207421 GAGT--ATCTAAACCAcctt-aa---aatt---
i Balaenoptera_acutorostrata.KI537508.1                  N 0 I 2
s Balaenoptera_bonaerensis.DF707048.1                         1182 24 -     18090 GAGT--ATCTAAACCACctt-aa---aatt---
i Balaenoptera_bonaerensis.DF707048.1                    N 0 I 2
s Beatragus_hunteri.BeaHun_scaffold_50177                    25346 24 +     34529 GAGT--ACCTAAAACACCTT-AAA---ATT---
i Beatragus_hunteri.BeaHun_scaffold_50177                N 0 I 2
s Bison_bison.KN261452.1                                    198096 24 -    288883 GAGT--ACCTAAACCACCTT-AAA---ATT---
i Bison_bison.KN261452.1                                 N 0 I 2
s Bos_indicus.CM003047.1                                  20271295 24 +  48749331 GAGT--ACCTAAACCACCTT-AAA---ATT---
i Bos_indicus.CM003047.1                                 N 0 I 2
s Bos_mutus.JH880303.1                                     1123851 24 -   1948126 GAGT--ACCTAAACCACCTT-AAA---ATT---
i Bos_mutus.JH880303.1                                   N 0 I 2
s Bos_taurus.CM000203.6                                   18081933 24 +  45695690 GAGT--ACCTAAACCACCTT-AAA---ATT---
i Bos_taurus.CM000203.6                                  N 0 I 2
s Bubalus_bubalis.KI419123.1                               2817424 24 +   4408762 GAGT--ACCTAAACCACCTT-AAA---ATT---
i Bubalus_bubalis.KI419123.1                             N 0 I 2
s Camelus_bactrianus.KN276810.1                            9998096 24 -  17673402 GAGA--ACCTAAACCACCTT-AAA---ACT---
i Camelus_bactrianus.KN276810.1                          N 0 I 2
s Camelus_dromedarius.KN272107.1                           2330551 24 -   7040546 GAGA--ACCTAAACCACCTT-AAA---ACT---
i Camelus_dromedarius.KN272107.1                         N 0 I 2
s Camelus_ferus.KB017975.1                                  398804 24 -   1652518 GAGA--ACCTAAACCACCTT-AAA---ACT---
i Camelus_ferus.KB017975.1                               N 0 I 2
s CanFam4.chr16                                           17794899 24 -  60362399 GAGC--ACCTAAACCACCTT-TAA---ATT---
i CanFam4.chr16                                          N 0 I 2
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    180962 24 -    185531 GAGC--ACCTAAACCACCTT-TAA---ATT---
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 N 0 I 2
s Canis_lupus_dingo.QKWQ01000480.1                         9030350 24 -   9314153 GAGC--ACCTAAACCacctt-ta---aatt---
i Canis_lupus_dingo.QKWQ01000480.1                       N 0 I 2
s Canis_lupus_familiaris.chr16                            17954609 24 -  59632846 GAGC--ACCTAAACCacctt-ta---aatt---
i Canis_lupus_familiaris.chr16                           N 0 I 2
s Canis_lupus_orion.HG994398.1                            18495850 24 +  63665305 GAGC--ACCTAAACCacctt-ta---aatt---
i Canis_lupus_orion.HG994398.1                           N 0 I 2
s Capra_aegagrus.CM003241.1                               18828541 24 +  46296322 GAGT--ACCTAAACCACCTT-AAA---ATT---
i Capra_aegagrus.CM003241.1                              N 0 I 2
s Capra_hircus.CM004588.1                                 18059261 24 -  44709034 GAGT--ACCTAAACCACCTT-AAA---ATT---
i Capra_hircus.CM004588.1                                N 0 I 2
s Capromys_pilorides.CapPil_scaffold_65020                     172 25 -     12242 GAGT--ACCTAAACTGCCTT-GAA---ATT--T
i Capromys_pilorides.CapPil_scaffold_65020               N 0 C 0
s Carlito_syrichta.NW_007259797.1                           139848 23 -    496798 GAGC--ATCCAAGTCACCTA-AA-----AG--C
i Carlito_syrichta.NW_007259797.1                        N 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2074 24 -     11696 GAGG--ACCTGAACCGCCCT-GGA---ATC---
i Carollia_perspicillata.CarPer_scaffold_92756           N 0 I 2
s Castor_canadensis.CasCan_scaffold_2074                    132833 25 +    179628 GAAC--ACCTAAACTGCCTT-AAA---ATT--C
i Castor_canadensis.CasCan_scaffold_2074                 N 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     87886 24 +    217609 GAGT--ACCTAAACCACCTT-AAA---ATT---
i Catagonus_wagneri.CatWag_scaffold_2839                 N 0 I 2
s Cavia_aperea.AVPZ01000300.1                             18346676 25 -  23392119 GAGC--ACCTAAACCACCTT-AAA---ATT--C
i Cavia_aperea.AVPZ01000300.1                            N 0 C 0
s Cavia_porcellus.DS562891.1                              18358936 25 -  23407841 GAGC--ACCTAAACCACCTT-AAA---ATT--C
i Cavia_porcellus.DS562891.1                             N 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        97811 25 +    143979 GAGC--ACCTAAACCACCTT-AAA---ATT--C
i Cavia_tschudii.CavTsc_scaffold_8919                    N 0 C 0
s Cephalopachus_bancanus.k141_2037105                         3745 22 -      8605 GAGC--ATCCAAGCCACCTA-AA------G--C
i Cephalopachus_bancanus.k141_2037105                    N 0 C 0
s Ceratotherium_simum.JH767749.1                          12227045 24 +  27778364 GAGC--ACCTAAACCAcctt-aa---aatt---
i Ceratotherium_simum.JH767749.1                         N 0 I 2
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          1763 24 -      3715 GAGC--ACCTAAACCACCTT-AAA---ATT---
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     N 0 I 2
s Cercocebus_atys.KQ010504.1                               4469442 24 +   4669795 GAAC--ACCTTAACGCCCTATTA-----TT--C
i Cercocebus_atys.KQ010504.1                             N 0 C 0
s Cercocebus_chrysogaster.k141_393940                         7991 24 -     19203 GAAC--ACCTTAATGCCCTATTA-----TT--C
i Cercocebus_chrysogaster.k141_393940                    N 0 C 0
s Cercocebus_lunulatus.k141_3846941                           2410 24 +      8260 GAAC--ACCTTAATGCCCTATTA-----TT--C
i Cercocebus_lunulatus.k141_3846941                      N 0 C 0
s Cercocebus_torquatus.k141_3057011                           2640 24 +     27781 GAAC--ACCTTAACGCCCTATTA-----TT--C
i Cercocebus_torquatus.k141_3057011                      N 0 C 0
s Cercopithecus_ascanius.k141_1024104                         2790 24 -     20310 GAAC--ACCTTAACGCCCTATTA-----TT--C
i Cercopithecus_ascanius.k141_1024104                    N 0 C 0
s Cercopithecus_cephus.k141_1078548                           5774 24 +     29689 GAAC--ACCTTAACGCCCTATTA-----TT--C
i Cercopithecus_cephus.k141_1078548                      N 0 C 0
s Cercopithecus_diana.k141_2427854                             127 24 +      9989 GACC--ACCTTAACGCCCTATTA-----TT--C
i Cercopithecus_diana.k141_2427854                       N 0 C 0
s Cercopithecus_hamlyni.k141_187466                           8462 24 -     27936 GAAC--ACCTTAACGCCCTATTA-----TT--C
i Cercopithecus_hamlyni.k141_187466                      N 0 C 0
s Cercopithecus_lowei.k141_457449                             8481 24 -     11289 GAAC--ACCTTAACGCCCTATTA-----TT--C
i Cercopithecus_lowei.k141_457449                        N 0 C 0
s Cercopithecus_albogularis.ctg5                                38810857 24 +  39242232 GAAC--ACCTTAACGCCCTATTA-----TT--C
i Cercopithecus_albogularis.ctg5                               N 0 C 0
s Cercopithecus_mona.ctg39                                21216548 24 -  21565898 GAAC--ACCTTAACGCCCTATTA-----TT--C
i Cercopithecus_mona.ctg39                               N 0 C 0
s Cercopithecus_neglectus.k141_2526306                       33668 24 -     53127 GAAC--ACCTTAACGCCCTATTA-----TT--C
i Cercopithecus_neglectus.k141_2526306                   N 0 C 0
s Cercopithecus_nictitans.k141_3278028                         960 24 +      7159 GAAC--ACCTTAACGCCCTATTA-----TT--C
i Cercopithecus_nictitans.k141_3278028                   N 0 C 0
s Cercopithecus_petaurista.k141_807961                        8473 24 -     27947 GAAC--ACCTTAACGCCCTATTA-----TT--C
i Cercopithecus_petaurista.k141_807961                   N 0 C 0
s Cercopithecus_pogonias.k141_822820                          8449 24 +     17596 GAAC--ACCTTAACACCCTATTA-----TT--C
i Cercopithecus_pogonias.k141_822820                     N 0 C 0
s Cercopithecus_roloway.k141_3180641                         38943 24 -     41420 GAAC--ACCTTAACGCCCTATTA-----TT--C
i Cercopithecus_roloway.k141_3180641                     N 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            3686 24 -      6351 GCAC--ACATAAACCACCTT-AAA---T-G--T
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       N 0 C 0
s Cheirogaleus_major.k141_1490224                            60687 25 +     61209 GAGC--ACCTAAACCACTTT-AA-----AATGC
i Cheirogaleus_major.k141_1490224                        N 0 C 0
s Cheirogaleus_medius.k141_1055463                           11067 25 +     57038 GAGC--ACCTAAACCACTTT-AA-----AATGC
i Cheirogaleus_medius.k141_1055463                       N 0 C 0
s Chinchilla_lanigera.JH722012.1                           1247719 25 +   2543920 AAGC--ACCTAAACCACCTt-aa---aatt--c
i Chinchilla_lanigera.JH722012.1                         N 0 C 0
s Chlorocebus_aethiops.ctg25                              18422412 24 -  18827391 GAAC--ACCTCAATGCGCTATTA-----TT--C
i Chlorocebus_aethiops.ctg25                             N 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        8855 24 -     50209 GAAC--ACCTCAATGCGCTATTA-----TT--C
i Chlorocebus_pygerythrus.k141_1025673                   N 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135415860 24 + 135778131 GAAC--ACCTCAATGCGCTATTA-----TT--C
i Chlorocebus_sabaeus.CM001947.1                         N 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 14320 11 +     19366 GAGA--ACCTAAA--------------------
i Choloepus_didactylus.ChoDid_scaffold_45914             N 0 I 3
s Choloepus_hoffmanni.KN194906.1                            169423 11 +    839153 GAGA--ACCTAAA--------------------
i Choloepus_hoffmanni.KN194906.1                         N 0 I 3
s Colobus_angolensis.KN981557.1                            1904369 24 +   2368649 GAAC--ACCTTAACGCCCTGTTA-----TT--C
i Colobus_angolensis.KN981557.1                          N 0 C 0
s Colobus_guereza.LG01                                   199943987 24 + 200372422 GAAC--ACCTTAACGCCCTGTTA-----TT--C
i Colobus_guereza.LG01                                   N 0 C 0
s Colobus_polykomos.k141_906115                              30882 24 +     84244 GAAC--ACCTTAACGCCCTGTTA-----TT--C
i Colobus_polykomos.k141_906115                          N 0 C 0
s Condylura_cristata.JH655891.1                           17545132 26 -  53390261 GAGC--ACCTAAACCACCTA-CAAtcact----
i Condylura_cristata.JH655891.1                          N 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438           9711 24 -     20389 GAGT--ACTTAAACCACCTT-AGA---ATT---
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      N 0 I 2
s Cricetomys_gambianus.CriGam_scaffold_18520                 46037 21 +     63868 GAGT--TACTAAAC----TT-AAA---ATT--C
i Cricetomys_gambianus.CriGam_scaffold_18520             N 0 C 0
s Cricetulus_griseus.LT883664.1                           11662840 25 + 224834208 TAGT--TCCCAAACTGCCCT-AAA---ATt--c
i Cricetulus_griseus.LT883664.1                          N 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_603213               304 23 +      1923 GAGC--ACCTAACTTACCTT-AAA---AT----
i Crocidura_indochinensis.CroInd_scaffold_603213         N 0 I 4
s Cryptoprocta_ferox.CryFer_flattened_line_16129             17156 24 -     87169 GAGC--ACCTAATCCACCTT-TAA---ATT---
i Cryptoprocta_ferox.CryFer_flattened_line_16129         N 0 I 2
s Ctenodactylus_gundi.CteGun_scaffold_65                    833978 25 +   1526836 GAGC--AACTACACCACCTT-AAA---ATG--C
i Ctenodactylus_gundi.CteGun_scaffold_65                 N 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  34582 25 +     51376 GAGT--ACCTAAACTACCTT-AAA---ACT--C
i Ctenomys_sociabilis.CteSoc_scaffold_29687              N 0 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2054 24 +      5455 GAGC--ACCTAAA-CACCTT-AAA---ATT--C
i Cuniculus_paca.CunPac_flattened_line_231100            N 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793             443 25 +      3576 GAGC--ACCTAAACCACCTT-AAA---ATT--C
i Dasyprocta_punctata.DasPun_flattened_line_206793       N 0 C 0
s Dasypus_novemcinctus.JH564415.1                            59866 24 +   2246927 GAGC--ACCTAAACTACCTT-AAA---A-G--t
i Dasypus_novemcinctus.JH564415.1                        N 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532040 25 -  12879189 AGGG--ACCGAAACCACCTG-AA-----AGTGC
i Daubentonia_madagascariensis.ctg71                     N 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16810352 24 +  35494412 GAGT--ACCTAAACCACCTT-AAA---ATT---
i Delphinapterus_leucas.KZ290073.1                       N 0 I 2
s Desmodus_rotundus.KZ672289.1                             8627107 24 +  20541912 GAGG--ACCTGAACCACCCT-ATA---ATT---
i Desmodus_rotundus.KZ672289.1                           N 0 I 2
s Dicerorhinus_sumatrensis.PEKH010002091.1                  668575 24 +   1390856 GAGC--ACCTAAACCACctt-aa---aatt---
i Dicerorhinus_sumatrensis.PEKH010002091.1               N 0 I 2
s Diceros_bicornis.DicBicMic_scaffold_5955                    1652 24 +    198055 GAGC--ACCTAAACCACCTT-AAA---ATT---
i Diceros_bicornis.DicBicMic_scaffold_5955               N 0 I 2
s Dinomys_branickii.DinBra_scaffold_21862                    33504 25 +     67921 GAGC--ACCTAAACCACCTT-AAA---ATT--C
i Dinomys_branickii.DinBra_scaffold_21862                N 0 C 0
s Dipodomys_ordii.KN672350.1                              18894380 25 +  37912305 GACT--ATCTGAAACACCTT-AAA---ATC--A
i Dipodomys_ordii.KN672350.1                             N 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  11101 25 +     14536 GACT--ATCTGAAACACCTT-AAA---ATC--A
i Dipodomys_stephensi.DipSte_scaffold_75855              N 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 30697 26 -     42551 GAGC--ACCTAAACCACCTT-AAA--AATT--C
i Dolichotis_patagonum.DolPat_scaffold_30833             N 0 C 0
s Eidolon_helvum.KE759718.1                                   6613 24 +     11740 CAGT--ACCTAAACCACCTT-AGA---ATT---
i Eidolon_helvum.KE759718.1                              N 0 I 2
s Elaphurus_davidianus.JRFZ01104969.1                       309548 24 +    607251 GAGT--ACCTAAACCACCTT-AAA---ATT---
i Elaphurus_davidianus.JRFZ01104969.1                    N 0 I 2
s Elephantulus_edwardii.JH947257.1                         1088207 25 +  10337057 GAGC--ACTTAAACCACCTc-ag---aatt--t
i Elephantulus_edwardii.JH947257.1                       N 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          11629 25 -    110024 TAGT--TCCTAAACTGCCCT-CAA---ATT--C
i Ellobius_lutescens.LOEQ01008920.1                      N 0 C 0
s Ellobius_talpinus.LOJH01123422.1                            2585 25 +      5358 TAGT--TCCTAAACTGCCCT-CAA---ATT--C
i Ellobius_talpinus.LOJH01123422.1                       N 0 C 0
s Enhydra_lutris.KZ291758.1                               16324965 24 -  41312741 GAGT--ATCTAAACcacctt-ta---aatt---
i Enhydra_lutris.KZ291758.1                              N 0 I 2
s Eptesicus_fuscus.JH977646.1                              2142963 24 -  14770903 gggt--ACCTAAACCACCTT-AGA---ATT---
i Eptesicus_fuscus.JH977646.1                            N 0 I 2
s Equus_asinus.JREZ01000139.1                              1278914 24 +   4378816 GAGC--ACCTAAACCACCTT-AAA---ATT---
i Equus_asinus.JREZ01000139.1                            N 0 I 2
s Equus_caballus.CM000403.2                               18526735 24 -  39960074 GAGC--ACCTAAACCAACTT-AAA---ATT---
i Equus_caballus.CM000403.2                              N 0 I 2
s Equus_przewalskii.KK951119.1                               28750 24 +    498745 GAGC--ACCTAAACCAACTT-AAA---ATT---
i Equus_przewalskii.KK951119.1                           N 0 I 2
s Erinaceus_europaeus.JH835339.1                           3319947 23 -   7059049 GAAC--ACCCAAACCACCTT-AAA---AT----
i Erinaceus_europaeus.JH835339.1                         N 0 C 0
s Erythrocebus_patas.Contig38                             21199095 24 -  21539334 GAAC--ACGTCAATGCGCTATTA-----TT--C
i Erythrocebus_patas.Contig38                            N 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10028 24 +    133382 GAGT--ACCTAAACCACCTT-AAA---ATT---
i Eschrichtius_robustus.EscRob_flattened_line_8968       N 0 I 2
s Eubalaena_japonica.EubJap_flattened_line_31514             23966 24 -     44125 GAGT--ATCTAAACCACCTT-AAA---ATT---
i Eubalaena_japonica.EubJap_flattened_line_31514         N 0 I 2
s Eulemur_albifrons.k141_342033                               9052 25 -     14127 GAGC--ACCTAAACCACCTT-AA-----AATGC
i Eulemur_albifrons.k141_342033                          N 0 C 0
s Eulemur_collaris.k141_377015                                1742 25 -     16928 GAGC--ACCTAAACCACCTT-AA-----AATGC
i Eulemur_collaris.k141_377015                           N 0 C 0
s Eulemur_coronatus.k141_885031                              10773 25 -     25546 GAGC--ACCTAAACCACCTT-AA-----AATGC
i Eulemur_coronatus.k141_885031                          N 0 C 0
s Eulemur_flavifrons.k141_1184614                             7960 25 +     26330 GAGC--ACCTAAACCACCTT-AA-----AATGC
i Eulemur_flavifrons.k141_1184614                        N 0 C 0
s Eulemur_fulvus.k141_544389                                  9217 25 +     23973 GAGC--ACCTAAACCACCTT-AA-----AATGC
i Eulemur_fulvus.k141_544389                             N 0 C 0
s Eulemur_macaco.k141_1562045                                 7964 25 +     75513 GAGC--ACCTAAACCACCTT-AA-----AATGC
i Eulemur_macaco.k141_1562045                            N 0 C 0
s Eulemur_mongoz.k141_232305                                  5912 25 +     97555 GAGC--ACCTAAACCACCTT-AA-----AATGC
i Eulemur_mongoz.k141_232305                             N 0 C 0
s Eulemur_rubriventer.k141_571033                             8846 25 +     26496 GAGC--ACCTAAACCACCTT-AA-----AATGC
i Eulemur_rubriventer.k141_571033                        N 0 C 0
s Eulemur_rufus.k141_2367191                                  1851 25 +      2552 GAGC--ACCTAAACCACCTT-AA-----AATGC
i Eulemur_rufus.k141_2367191                             N 0 C 0
s Eulemur_sanfordi.k141_1122526                               9019 25 +    111500 GAGC--ACCTAAACCACCTT-AA-----AATGC
i Eulemur_sanfordi.k141_1122526                          N 0 C 0
s Felis_catus.CM001381.2                                  20225843 24 + 206538554 GAGC--ACCTAATCCacctt-ta---aatt---
i Felis_catus.CM001381.2                                 N 0 I 2
s Felis_catus_fca126.CM031415.1                           20184572 24 + 205367284 GAGC--ACCTAATCCacctt-ta---aatt---
i Felis_catus_fca126.CM031415.1                          N 0 I 2
s Felis_nigripes.FelNig_flattened_line_125938                 9686 24 -     11347 GAGC--ACCTAATCCACCTT-TAA---ATT---
i Felis_nigripes.FelNig_flattened_line_125938            N 0 I 2
s Fukomys_damarensis.KN121974.1                             847721 25 +   3816255 GAGC--ACCTAAACCACTTT-AAA---ATA--C
i Fukomys_damarensis.KN121974.1                          N 0 C 0
s Galagoides_demidoff.k141_31856                              1834 26 -      3432 GAAC--ACCTAAACCACCTTAAT-----TTTTT
i Galagoides_demidoff.k141_31856                         N 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               24619 25 +     26054 GAGC--ACCTAAACCACCTT-AAA---ATT--C
i Galeopterus_variegatus.GalVar_scaffold_56069           N 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     608052 24 -    660261 GAGT--ACCTAAACCACCTT-AAA---ATT---
i Giraffa_tippelskirchi.LVKQ01S007888.1                  N 0 I 2
s Glis_glis.GliGli_scaffold_19807                            29463 20 +     49224 GAAC--ACCTGATCCACCTT-AA----------
i Glis_glis.GliGli_scaffold_19807                        N 0 I 2
s Gorilla_beringei.k141_2022027                                648 23 +      3305 GAAC--ACCTAAACGCCCTA-AA-----TT--C
i Gorilla_beringei.k141_2022027                          N 0 C 0
s Gorilla_gorilla.CYUI03002401.1                              4870 23 +      7071 GAAC--ACCTAAACGCCCTA-AA-----TT--C
i Gorilla_gorilla.CYUI03002401.1                         N 0 I 364
s Graphiurus_murinus.GraMur_scaffold_10447                   29267 25 +     78134 GAGC--ACCTGATCCACCTT-AAA---ACT--C
i Graphiurus_murinus.GraMur_scaffold_10447               N 0 C 0
s Hapalemur_alaotrensis.k141_170648                           2100 25 -     19426 AAGC--ACCTAAACCACCTT-AA-----AGTGC
i Hapalemur_alaotrensis.k141_170648                      N 0 C 0
s Hapalemur_gilberti.k141_488810                              7246 25 -     15286 AAGC--ACCTAAACCACCTT-AA-----AGTGC
i Hapalemur_gilberti.k141_488810                         N 0 C 0
s Hapalemur_griseus.k141_1511508                              8864 25 +     18253 AAGC--ACCTAAACCACCTT-AA-----AGTGC
i Hapalemur_griseus.k141_1511508                         N 0 C 0
s Hapalemur_meridionalis.k141_248335                          8987 25 -     41752 AAGC--ACCTAAACCACCTT-TA-----AGTGC
i Hapalemur_meridionalis.k141_248335                     N 0 C 0
s Hapalemur_occidentalis.k141_907772                          8808 25 -     16460 AAGC--ACCTAAACCACCTT-AA-----AGTGC
i Hapalemur_occidentalis.k141_907772                     N 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               230338 24 +    327341 GAGC--ACCTAATCCACCTT-TAA---ATT---
i Helogale_parvula.HelPar_flattened_line_2585            N 0 I 2
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 16748 24 +     36099 GAGT--ACCTAAACCACCTT-AAA---ATT---
i Hemitragus_hylocrius.HemHyl_scaffold_45859             N 0 I 2
s Heterocephalus_glaber.JH602082.1                        20658635 25 +  22651954 GAGC--ACCTAAACCATCTT-AAA---ATT--C
i Heterocephalus_glaber.JH602082.1                       N 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_177355                2390 25 -      3210 GCAC--ATCTAATCCACCTT-AAA---GTT--C
i Heterohyrax_brucei.HetBruBak_scaffold_177355           N 0 I 171
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111197 24 +    128679 GAGT--ACCTAAACCACCTT-AAA---ATT---
i Hippopotamus_amphibius.HipAmp_scaffold_9076            N 0 I 2
s Hipposideros_armiger.JXIK01000431.1                       107582 24 +   1711038 GAGT--ATCTACACCACCTT-AGA---ATT---
i Hipposideros_armiger.JXIK01000431.1                    N 0 I 2
s Hipposideros_galeritus.HipGal_scaffold_29171               39025 24 +     43066 GAGT--ACCTACACCACCTT-AGA---ATT---
i Hipposideros_galeritus.HipGal_scaffold_29171           N 0 I 2
s Hoolock_leuconedys.ctg274                                    428425 23 +    630532 GAAC--ACCCAGAGACCCTA-AA-----TT--C
i Hoolock_leuconedys.ctg274                                 N 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  32432 24 +     55795 GAGC--ACCTAATCCACCTT-TCA---ATT---
i Hyaena_hyaena.HyaHya_flattened_line_26932              N 0 I 2
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19057 25 -    143317 GAGC--ACCTAAACCACCTT-AAA---ATT--C
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        N 0 C 0
s Hylobates_agilis.k141_307679                               11343 23 -     15490 GAAC--ACCCAAACACCCTA-AA-----TT--C
i Hylobates_agilis.k141_307679                           N 0 C 0
s Hylobates_klossii.k141_282416                              53348 23 +     67168 GAAC--ACCCAAACACCCTA-AA-----TT--C
i Hylobates_klossii.k141_282416                          N 0 C 0
s Hylobates_pileatus_b.LG02                                     189536792 23 - 191637585 GAAC--ACCCAAACACCCTA-AA-----TT--C
i Hylobates_pileatus_b.LG02                                     N 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3329891 23 -  11177569 GAAC--ACCCAAACACCCTA-AA-----TT--C
i Hylobates_pileatus_a.tarseq_633                          N 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80133 25 +    135385 GAGC--ACCTAAACTACCTT-AA---GATC--C
i Hystrix_cristata.HysCri_scaffold_5660                  N 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7513683 25 -   7955117 GAGT--ACCTAACCTgcctt-aa---aatt--c
i Ictidomys_tridecemlineatus.JH393364.1                  N 0 C 0
s Indri_indri.k141_3655594                                   17215 25 +     31101 GAGC--ACCTAAACCACCTT-AA-----AATGC
i Indri_indri.k141_3655594                               N 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               21569 24 +     23964 GAAT--ACCTAAACTACCTT-AAA---ATT---
i Inia_geoffrensis.IniGeo_flattened_line_48101           N 0 I 2
s Jaculus_jaculus.JH725527.1                               8270507 25 -   9596543 GAGT--GTCTAAACTGCCTT-AAA---ATC--C
i Jaculus_jaculus.JH725527.1                             N 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                 836 24 -      3359 GAGT--ACCTAAACCACCTT-AAA---ATT---
i Kogia_breviceps.KogBre_flattened_line_192630           N 0 I 2
s Lasiurus_borealis.LasBor_scaffold_32767                    11093 24 -     42476 GGGT--CCCTAAACCACCTT-AGA---ATT---
i Lasiurus_borealis.LasBor_scaffold_32767                N 0 I 131
s Lemur_catta.scaffold_24                                 15519346 25 -  30322482 AAGC--ACCTAAACCACCTT-AA-----AGTGC
i Lemur_catta.scaffold_24                                N 0 C 0
s Lepilemur_ankaranensis.k141_596936                          5856 25 -     23766 GAGC--ACCTAAACCATCTT-AA-----AATGC
i Lepilemur_ankaranensis.k141_596936                     N 0 C 0
s Lepilemur_dorsalis.k141_577674                             23819 25 +     45836 GAGC--ACCTAAACCATCTT-AA-----AATGC
i Lepilemur_dorsalis.k141_577674                         N 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         30709 25 -     32627 GAGC--ACCTAAACCATCTT-AA-----AATGC
i Lepilemur_ruficaudatus.k141_420445                     N 0 C 0
s Lepilemur_septentrionalis.k141_185316                      21909 25 +     54090 GAGC--ACCTAAACCATCTT-AA-----AATGC
i Lepilemur_septentrionalis.k141_185316                  N 0 C 0
s Leptonychotes_weddellii.APMU01165359.1                      1133 24 -      1663 GAGC--ACCTAAACCacctt-ta---aatt---
i Leptonychotes_weddellii.APMU01165359.1                 N 0 I 2
s Lepus_americanus.LepAme_scaffold_107385                     2775 25 -     14121 CAGT--ACCTACACTACCTT-AAA---ATT--C
i Lepus_americanus.LepAme_scaffold_107385                N 0 C 0
s Lipotes_vexillifer.KE559953.1                             266650 24 -    662738 GAGT--ACCTAAACCACCTT-AAA---ATT---
i Lipotes_vexillifer.KE559953.1                          N 0 I 2
s Lophocebus_aterrimus.ctg367                              1430608 24 +   1826925 GAAC--ACCTTAACGCCCTATTA-----TT--C
i Lophocebus_aterrimus.ctg367                            N 0 C 0
s Loxodonta_africana.GL010049.1                            4213644 25 -  43346337 GAGC--ATCTAAACCACatt-aa---aatt--a
i Loxodonta_africana.GL010049.1                          N 0 C 0
s Lycaon_pictus.CM007581.1                                17950849 24 -  59628241 GAGC--ACCTAAACCacctt-ta---aatt---
i Lycaon_pictus.CM007581.1                               N 0 I 2
s Macaca_arctoides.k141_2326796                                818 24 +     40492 GAAC--ACCTTAACGCCCTATTA-----TT--C
i Macaca_arctoides.k141_2326796                          N 0 C 0
s Macaca_assamensis.Contig5                               59670078 24 +  60120075 GAAC--ACCTTAACGCCCTATTA-----TT--C
i Macaca_assamensis.Contig5                              N 0 C 0
s Macaca_cyclopis.k119_18836                                  6576 24 -     26193 GAAC--ACCTTAACGCCCTATTA-----TT--C
i Macaca_cyclopis.k119_18836                             N 0 C 0
s Macaca_fascicularis.k141_814140                            74366 24 -    114318 GAAC--ACCTTAACGCCCTATTA-----TT--C
i Macaca_fascicularis.k141_814140                        N 0 C 0
s Macaca_fuscata.k119_255327                                    89 24 -     23192 GAAC--ACCTTAACGCCCTATTA-----TT--C
i Macaca_fuscata.k119_255327                             N 0 C 0
s Macaca_leonina.k141_3550399                                 9538 24 -     29190 GAAC--ACCTTAACGCCCTATTA-----TT--C
i Macaca_leonina.k141_3550399                            N 0 C 0
s Macaca_maura.k141_2733130                                  18109 24 +     37952 GAAC--ACCTTAACGCCCTATTA-----TT--C
i Macaca_maura.k141_2733130                              N 0 C 0
s Macaca_mulatta.NC_041758.1                             186833197 24 + 187317192 GAAC--ACCTTAACGCCCTATTA-----TT--C
i Macaca_mulatta.NC_041758.1                             N 0 C 0
s Macaca_nemestrina.KQ007038.1                            25451755 24 -  25927173 GAAC--ACCTTAACGCCCTATTA-----TT--C
i Macaca_nemestrina.KQ007038.1                           N 0 C 0
s Macaca_nigra.k141_1655396                                  73958 24 +     89720 GAAC--ACCTTAACGCCCTATTA-----TT--C
i Macaca_nigra.k141_1655396                              N 0 C 0
s Macaca_radiata.k141_3680011                                  955 24 +     20474 GAAC--ACCTTAACGCCCTATTA-----TT--C
i Macaca_radiata.k141_3680011                            N 0 C 0
s Macaca_siberu.k141_635500                                    756 24 -     14993 GAAC--ACCTTAACGCCCTATTA-----TT--C
i Macaca_siberu.k141_635500                              N 0 C 0
s Macaca_silenus.Contig273                                  323388 24 -    668171 GAAC--ACCTTAACGCCCTATTA-----TT--C
i Macaca_silenus.Contig273                               N 0 C 0
s Macaca_thibetana.k99_7456                                  14898 24 -     15935 GAAC--ACCTTAACGCCCTATTA-----TT--C
i Macaca_thibetana.k99_7456                              N 0 C 0
s Macaca_tonkeana.k141_1498238                               19694 24 -     45290 GAAC--ACCTTAACGCCCTATTA-----TT--C
i Macaca_tonkeana.k141_1498238                           N 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 86754 24 +     94391 CAGT--ACCTAAAGCACCTT-AGA---ATT---
i Macroglossus_sobrinus.MacSob_scaffold_8222             N 0 I 2
s Mandrillus_leucophaeus.scaffold280                      23931230 24 -  24302211 GAAC--ACCTTACCGCCCTGTTA-----TT--C
i Mandrillus_leucophaeus.scaffold280                     N 0 C 0
s Mandrillus_sphinx.Contig270                               345407 24 +    752769 GAAC--ACCTTAACGCCCTATTA-----TT--C
i Mandrillus_sphinx.Contig270                            N 0 C 0
s Manis_javanica.JSZB01003497.1                              14727 24 +    737560 AAGC--ACCTAAAccatctt-aa---aatt---
i Manis_javanica.JSZB01003497.1                          N 0 C 0
s Manis_pentadactyla.KN006162.1                              46121 24 -    317179 GAGC--ACCTAAAccatctt-aa---aatt---
i Manis_pentadactyla.KN006162.1                          N 0 C 0
s Marmota_marmota.CZRN01000018.1                          33096530 25 -  40650429 GAGT--ACCTAACCTgcctt-aa---aatt--c
i Marmota_marmota.CZRN01000018.1                         N 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6022 24 -    207569 GCCT--ATTTAACCCACCTC-AGA---ATT---
i Megaderma_lyra.MegLyr_scaffold_4542                    N 0 I 2
s Mellivora_capensis.MelCap_flattened_line_69365              5206 24 +     13704 GAGT--ACCTAAACCACCTT-TAA---ATT---
i Mellivora_capensis.MelCap_flattened_line_69365         N 0 I 2
s Meriones_unguiculatus.MerUng_scaffold_7390                 27339 25 +    140813 AAAA--TCCTAATCTGACTT-AAA---ATT--T
i Meriones_unguiculatus.MerUng_scaffold_7390             N 0 C 0
s Mesocricetus_auratus.KB708134.1                         12177216 25 -  29670104 TAGT--TCCTAAACTGACCT-aa---aatt--c
i Mesocricetus_auratus.KB708134.1                        N 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    2237 24 +     10310 GAGT--ACCTAAACCACCTT-AAA---ACT---
i Mesoplodon_bidens.MesBid_scaffold_108144               N 0 I 2
s Microcebus_murinus.CM007674.1                           18282077 25 -  93316391 GAGC--ACCTAAACCACCTT-AA-----AAtgc
i Microcebus_murinus.CM007674.1                          N 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    14659 25 -    145209 GAAT--ATTTAACCCACCTT-AAA---ATG--T
i Microgale_talazaci.MicTal_scaffold_6613                N 0 I 21
s Micronycteris_hirsuta.MicHir_scaffold_52381                12621 24 -     19307 GAGG--ACCTGAACCACCCT-AGA---ATT---
i Micronycteris_hirsuta.MicHir_scaffold_52381            N 0 I 2
s Microtus_ochrogaster.CM001695.1                         11255579 25 -  27267610 TAGT--TCCTAAACTGCCCT-CAA---ATT--C
i Microtus_ochrogaster.CM001695.1                        N 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1848051 24 +   8254450 GAGT--GCCTAAACCACCTT-AG---aatt---
i Miniopterus_natalensis.LDJU01000034.1                  N 0 I 2
s Miniopterus_schreibersii.MinSch_scaffold_18080             31920 24 +     64694 GAGT--GCCTAAACCACCTT-AGA---ATT---
i Miniopterus_schreibersii.MinSch_scaffold_18080         N 0 I 2
s Miopithecus_ogouensis.k141_534055                           2968 24 -     28506 GAAC--ACCTTAACGCCCTATTA-----TT--C
i Miopithecus_ogouensis.k141_534055                      N 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        61384 24 -     63350 GAGC--ACCTAAACCACCTT-TAA---ATT---
i Mirounga_angustirostris.MirAng_flattened_line_22144    N 0 I 2
s Mirza_zaza.k141_1511790                                    38079 25 +     38511 GAGC--ACCCAAACCACCTT-AA-----AATGC
i Mirza_zaza.k141_1511790                                N 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    25742 24 -    437263 GAGT--ACCTAAACCACCTT-AAA---ATT---
i Monodon_monoceros.MonMon_M_scaffold_103                N 0 I 2
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137011 24 -    366855 AAGG--ACCTGAGCTACCCT-AGA---ATT---
i Mormoops_blainvillei.MorMeg_scaffold_1417              N 0 I 2
s Moschus_moschiferus.MosMos_scaffold_61429                  26686 24 -     27816 GAGT--ATCTAAACCACCTT-AAA---ACT---
i Moschus_moschiferus.MosMos_scaffold_61429              N 0 I 2
s Mungos_mungo.MunMun_flattened_line_23663                   23511 24 +     37127 GAGC--ACCCAATCCGCCTT-TAA---ATT---
i Mungos_mungo.MunMun_flattened_line_23663               N 0 I 2
s Murina_feae.MurFea_scaffold_85699                           4112 24 +     14753 CAGA--ACCTAAACCACCTT-AGA---ACC---
i Murina_feae.MurFea_scaffold_85699                      N 0 I 2
s Muscardinus_avellanarius.MusAve_scaffold_82313              1470 25 +     14296 GAGC--ACCTGATTCATCTT-AAA---ATG--C
i Muscardinus_avellanarius.MusAve_scaffold_82313         N 0 C 0
s Mustela_putorius.JH418006.1                               296850 24 -  14710649 GAGT--ACCTAAACCACctt-ta---aatt---
i Mustela_putorius.JH418006.1                            N 0 I 2
s Myocastor_coypus.MyoCoy_scaffold_10123                     70304 25 -     80779 GAGT--ATCTAAACTACCTT-GAA---ATT--C
i Myocastor_coypus.MyoCoy_scaffold_10123                 N 0 C 0
s Myotis_brandtii.KE162005.1                                277218 24 -  10118263 GAGT--ACCTAAACCACCTT-AGA---ATT---
i Myotis_brandtii.KE162005.1                             N 0 I 2
s Myotis_davidii.KB100139.1                                1584790 24 -   6019432 GAGT--ACCTAAACCACCTT-ACA---ATT---
i Myotis_davidii.KB100139.1                              N 0 I 2
s Myotis_lucifugus.GL429869.1                              3901007 24 -   4330536 GAGT--ACCTAAACCACCTT-AGA---ATT---
i Myotis_lucifugus.GL429869.1                            N 0 I 2
s Myotis_myotis.MyoMyo_scaffold_28916                        31557 24 +     33610 GAGT--ACCTAAACCACCTT-AGA---ATT---
i Myotis_myotis.MyoMyo_scaffold_28916                    N 0 I 2
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              185284 11 +    196477 GAAC--ACCTACA--------------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           N 0 I 3
s Nannospalax_galili.KL204047.1                            2024676 25 -   3037898 CAGT--ACTGAAACTGCCTT-AAA--a-tt--c
i Nannospalax_galili.KL204047.1                          N 0 C 0
s Nasalis_larvatus.k141_413338                                8983 24 +     21681 AAAC--ACCTTAACACCCTGTTA-----TT--C
i Nasalis_larvatus.k141_413338                           N 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20298375 24 +  31847680 GAGC--ACCTAAACCacctt-ta---aatt---
i Neomonachus_schauinslandi.NINY01007730.1               N 0 I 2
s Neophocaena_asiaeorientalis.KZ687982.1                   5864698 24 +   7148211 GAGT--ACCTAAACCACctt-aa---aatt---
i Neophocaena_asiaeorientalis.KZ687982.1                 N 0 I 2
s Noctilio_leporinus.NocLep_scaffold_251                    755596 24 +    783361 AAGG--ACCTGAACCACCCT-AGA---ATT---
i Noctilio_leporinus.NocLep_scaffold_251                 N 0 I 21
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145045 24 -   9404916 GAGC--ACCTAAACCacctt-ta---aatt---
i Nyctereutes_procyonoides.CAJHUB010000658.1             N 0 I 2
s Nycticebus_bengalensis.LG01                            102568938 25 - 196305487 GAAC--ACCTAAACCACCTT-AT-----TTTTT
i Nycticebus_bengalensis.LG01                            N 0 C 0
s Nycticebus_coucang.k141_7325916                             3717 25 -      4362 GAAC--ACCTAAACCACCTT-AT-----TTTTT
i Nycticebus_coucang.k141_7325916                        N 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105732969 25 + 199412804 GAAC--ACCTAAACCACCTT-AT-----TTTTT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       N 0 C 0
s Ochotona_princeps.JH802162.1                             1354885 25 +   3988456 CAAG--ACCTAGGCTACCTT-AAA---ATT--C
i Ochotona_princeps.JH802162.1                           N 0 C 0
s Octodon_degus.JH651603.1                                  745601 25 +  11899542 GAGT--TCCTACACTACCtt-aa---aatt--c
i Octodon_degus.JH651603.1                               N 0 C 0
s Odobenus_rosmarus.KB229312.1                              499902 24 -   2017862 GAGC--ACCTAAACcacctt-ta---aatt---
i Odobenus_rosmarus.KB229312.1                           N 0 I 2
s Odocoileus_virginianus.KZ100018.1                         143923 24 +    630418 GAGT--ACCTAAACCACCTT-AAA---ATT---
i Odocoileus_virginianus.KZ100018.1                      N 0 I 2
s Okapia_johnstoni.LVCL01S0005463.1                          75968 24 -    150152 GAGT--ACCTAAACCACCTT-AAA---ATT---
i Okapia_johnstoni.LVCL01S0005463.1                      N 0 I 2
s Ondatra_zibethicus.OndZib_scaffold_46174                   15886 25 +     28053 TAGT--TCCTAAACTGCCCT-CAA---ATT--C
i Ondatra_zibethicus.OndZib_scaffold_46174               N 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    73929 25 +    102263 TAAT--TCCTAAACTGCCCT-AAA---ACT--C
i Onychomys_torridus.OnyTor_scaffold_2986                N 0 C 0
s Orcinus_orca.KB316932.1                                  2780613 24 -  10937097 GAGT--ACCTAAACCACCTT-AAA---ATT---
i Orcinus_orca.KB316932.1                                N 0 I 2
s Orycteropus_afer.OryAfe_flattened_line_144387               6013 25 -     18566 GAGC--CTCTAAACCACCTT-AAA---ATG--T
i Orycteropus_afer.OryAfe_flattened_line_144387          N 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67143628 25 + 174332312 CAGT--ACCTACACTACCTT-AAA---ATT--T
i Oryctolagus_cuniculus.CM000791.1                       N 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       457805 24 -    559221 GAGC--ACCTAAACCacctt-ta---aatt---
i Otocyon_megalotis.JAEUCK010005147.1                    N 0 I 2
s Ovis_aries.CM001607.2                                   17584281 24 +  44047080 GAGT--ACCTAAACCACCTT-AAA---ATT---
i Ovis_aries.CM001607.2                                  N 0 I 2
s Ovis_canadensis.OviCan_scaffold_2572                      172698 24 -    191736 GAGT--ACCTAAACCACCTG-AAA---ATT---
i Ovis_canadensis.OviCan_scaffold_2572                   N 0 I 2
s Pan_paniscus.KQ411613.1                                    35374 11 +     80009 ----------aaa-aa---a-aa-----tt--c
i Pan_paniscus.KQ411613.1                                N 0 C 0
s Pan_troglodytes.CM009242.2                             189136312 23 + 189151597 GAAC--ACCTAAACGCCCTA-AA-----TT--C
i Pan_troglodytes.CM009242.2                             N 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  139785 24 +    230217 GAGC--ACCTAATCCACCTT-TAA---ATT---
i Panthera_onca.PanOnc_flattened_line_3271               N 0 I 2
s Panthera_pardus.KV860321.1                                251314 24 +  18783137 GAGC--ACCTAATCCacctt-ta---aatt---
i Panthera_pardus.KV860321.1                             N 0 I 2
s Panthera_tigris.KE722367.1                               4709755 24 -   8748460 GAGC--ACCTAATCCacctt-ta---aatt---
i Panthera_tigris.KE722367.1                             N 0 I 2
s Pantholops_hodgsonii.KE114653.1                          1263631 24 -   2937107 GAGT--ACCTAAACCACCTT-AAA---ATT---
i Pantholops_hodgsonii.KE114653.1                        N 0 I 2
s Papio_anubis.CM001495.2                                183436549 24 + 183742232 GAAC--ACCTTAACGCCCTATTA-----TT--C
i Papio_anubis.CM001495.2                                N 0 C 0
s Papio_cynocephalus.k141_4307930                              611 24 +     20448 GAAC--ACCTTAACGCCCTATTA-----TT--C
i Papio_cynocephalus.k141_4307930                        N 0 C 0
s Papio_hamadryas.Contig39                                20557233 24 +  20919399 GAAC--ACCTTAACGCCCTATTA-----TT--C
i Papio_hamadryas.Contig39                               N 0 C 0
s Papio_kindae.k141_4051466                                    811 24 -      1598 GAAC--ACCTTAACGCCCTATTA-----TT--C
i Papio_kindae.k141_4051466                              N 0 C 0
s Papio_papio.k141_802527                                     2643 24 +     27711 GAAC--ACCTTAACGCCCTATTA-----TT--C
i Papio_papio.k141_802527                                N 0 C 0
s Papio_ursinus.k141_3428135                                  2632 24 +      9205 GAAC--ACCTTAACGCCCTATTA-----TT--C
i Papio_ursinus.k141_3428135                             N 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272       582 24 -     78924 GAGC--ACCTAATCCACCTT-TAA---ATT---
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 N 0 I 128
s Perognathus_longimembris.PerPac_flattened_line_34437       24373 25 +     32600 GACC--CTCTGAAGCACCTT-AAA---ATT--C
i Perognathus_longimembris.PerPac_flattened_line_34437   N 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18186740 25 -  18517816 TAAT--TCCTAAACTGCCCT-AAA---ATT--C
i Peromyscus_maniculatus.KI615324.1                      N 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25088 25 -     29689 GAGC--ACCTATATTACCTT-AAA---ATT--C
i Petromus_typicus.PetTyp_scaffold_42190                 N 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               7660 24 +     63832 GAGT--ACCTAAACCACCTT-AAA---ATT---
i Phocoena_phocoena.PhoPho_flattened_line_24159          N 0 I 2
s Piliocolobus_badius.k141_1234363                           37497 24 +     62158 GAAC--ACCTTCACGCCCTGTTA-----TT--C
i Piliocolobus_badius.k141_1234363                       N 0 C 0
s Piliocolobus_gordonorum.k141_381342                        32224 24 +     89929 GAAC--ACCTTCACGCCCTGTTA-----TT--C
i Piliocolobus_gordonorum.k141_381342                    N 0 C 0
s Piliocolobus_kirkii.k141_448987                            33640 24 +     51399 GAAC--ACCTTCATGCCCTGTTA-----TT--C
i Piliocolobus_kirkii.k141_448987                        N 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14289861 24 -  14605196 GAAC--ACCTTCACGCCCTGTTA-----TT--C
i Piliocolobus_tephrosceles.PDMG02000141.1               N 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_7723             78576 24 +     79650 GAGT--ACCTAAACCACCTT-AGA---ATT---
i Pipistrellus_pipistrellus.PipPip_scaffold_7723         N 0 I 2
s Platanista_gangetica.PlaMin_flattened_line_32310           33372 24 +     35617 GAGT--ACCTAAACCACCTT-AAA---ATT---
i Platanista_gangetica.PlaMin_flattened_line_32310       N 0 I 2
s Pongo_abelii.CM009266.2                                189124401 23 + 189387572 GAAC--ACCTAAACGCCCTA-AA-----TT--C
i Pongo_abelii.CM009266.2                                N 0 C 0
s Pongo_pygmaeus.ctg66                                     9564244 23 +   9816681 GAAC--ACCTAAACGCCCTA-AA-----TT--C
i Pongo_pygmaeus.ctg66                                   N 0 C 0
s Presbytis_comata.k141_677006                               67143 24 -     81375 GAAC--ACCTTAACACCCTGTTA-----TT--C
i Presbytis_comata.k141_677006                           N 0 C 0
s Presbytis_mitrata.k141_2342859                              8963 24 +     10147 GAAC--ACCTTAACACCCTGTTA-----TT--C
i Presbytis_mitrata.k141_2342859                         N 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9145 24 -     22811 GCAC--ATCTAATCCACC-T-AAA---GTT--C
i Procavia_capensis.ProCapCap_scaffold_85530             N 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2591995 25 -   4620579 AAGC--ACCTAAACCACCTT-AA-----AGtgc
i Prolemur_simus.MPIZ01000396.1                          N 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     985108 25 +   2598838 GAGT--ACCTAAACCACctt-aa-----aatgc
i Propithecus_coquerelli.NW_012148875.1                  N 0 C 0
s Propithecus_coronatus.k141_347390                          23400 25 +     38485 GAGT--ACCTAAACCACCTT-AA-----AATGC
i Propithecus_coronatus.k141_347390                      N 0 C 0
s Propithecus_diadema.k141_1034595                           11487 25 -     12046 GAGT--ACCTAAACCACCTT-AA-----AATGC
i Propithecus_diadema.k141_1034595                       N 0 C 0
s Propithecus_edwardsi.k141_1176054                          20928 25 +     35766 GAGT--ACCTAAACCACCTT-AA-----AATGC
i Propithecus_edwardsi.k141_1176054                      N 0 C 0
s Propithecus_perrieri.k141_1630595                          16175 25 +     17239 GAGT--ACCTAAACCACCTT-AA-----AATGC
i Propithecus_perrieri.k141_1630595                      N 0 C 0
s Propithecus_tattersalli.k141_790011                        22934 25 -     67325 GAGT--ACCTAAACCACCTT-AA-----AATGC
i Propithecus_tattersalli.k141_790011                    N 0 C 0
s Propithecus_verreauxi.k141_1019028                         12650 25 -     13615 GAGT--ACCTAAACCACCTT-AA-----AATGC
i Propithecus_verreauxi.k141_1019028                     N 0 C 0
s Psammomys_obesus.NESX01036370.1                             4981 25 -     21651 AAAA--TCCTAATCtgactt-aa---aatt--t
i Psammomys_obesus.NESX01036370.1                        N 0 C 0
s Pteronotus_parnellii.KE909381.1                            10393 24 -     21811 GAGG--ACCTGAACCACCCC-AGA---GTT---
i Pteronotus_parnellii.KE909381.1                        N 0 I 2
s Pteronura_brasiliensis.PteBra_flattened_line_31117         35871 24 +     42204 GAGT--ACCTAAACCACCTT-TAA---ATT---
i Pteronura_brasiliensis.PteBra_flattened_line_31117     N 0 I 2
s Pteropus_alecto.KB030862.1                              22972886 24 +  28871421 CAGA--ACCTAAACCACCTT-AGA---ATT---
i Pteropus_alecto.KB030862.1                             N 0 I 2
s Pteropus_vampyrus.KN525825.1                             1355878 24 +   4952924 CAGA--ACCTAAACCACCTT-AGA---ATT---
i Pteropus_vampyrus.KN525825.1                           N 0 I 2
s Puma_concolor.QAVW01001104.1                            20262292 24 -  38429054 GAGC--ACCTAATCCacctt-ta---aatt---
i Puma_concolor.QAVW01001104.1                           N 0 I 2
s Pygathrix_cinerea.k141_1153803                              8971 24 -     91421 GAAC--ACCTTAACGCCCTGTTA-----TT--C
i Pygathrix_cinerea.k141_1153803                         N 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603102 24 +   7812017 GAAC--ACCTTAACGCCCTGTTA-----TT--C
i Pygathrix_nigripes_b.ctg100                               N 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8939 24 -     72585 GAAC--ACCTTAACGCCCTGTTA-----TT--C
i Pygathrix_nigripes_a.k141_215492                         N 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4171 24 +     55207 GAGT--ACCTAAACCACCTT-AAA---ATT---
i Rangifer_tarandus.RanTarSib_scaffold_29737             N 0 I 2
s Rattus_norvegicus.chr8                                  20365120 24 + 133307652 GAGT--TTCTAAAAAGCTTT-AAA----TT--T
i Rattus_norvegicus.chr8                                 N 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        366131 24 -   3329780 GAGT--ACCAAAACCACCTT-GG---GGTT---
i Rhinolophus_sinicus.LVEH01000134.1                     N 0 I 2
s Rhinopithecus_bieti.k119_217274                              353 24 -     11128 GAAC--ACCTTAACGCTCTGCTA-----TT--C
i Rhinopithecus_bieti.k119_217274                        N 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91229731 24 - 195417433 GAAC--ACCTTAACGCTCTGCTA-----TT--C
i Rhinopithecus_roxellana.NC_044550.1                    N 0 C 0
s Rhinopithecus_strykeri.ctg102                            7665439 24 +   7961872 GAAC--ACCTTAACGCTCTGCTA-----TT--C
i Rhinopithecus_strykeri.ctg102                          N 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                83866 24 -     96226 CTGT--ACCTAAACCACGTT-AGA---ATT---
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            N 0 I 2
s Saiga_tatarica.SaiTat_scaffold_373180                       2821 24 +      4321 GAGT--ACCTAAACCACCTT-AAA---ATT---
i Saiga_tatarica.SaiTat_scaffold_373180                  N 0 I 2
s Scalopus_aquaticus.ScaAqu_scaffold_662                    150545 26 -    313613 GAGC--ACCTAAACCACCTT-AAATTGCT----
i Scalopus_aquaticus.ScaAqu_scaffold_662                 N 0 C 0
s Semnopithecus_entellus.k141_11662                          13482 24 -     19888 GAAC--ACCTTAACGCCCTGTTA-----TT--C
i Semnopithecus_entellus.k141_11662                      N 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      20688 24 +     39453 GAAC--ACCTTAACGCCCTGTTA-----TT--C
i Semnopithecus_hypoleucos.k141_1615806                  N 0 C 0
s Semnopithecus_johnii.k141_670120                            1212 24 +     27826 AAAC--ACCTTAACGCCCTGTTA-----TT--C
i Semnopithecus_johnii.k141_670120                       N 0 C 0
s Semnopithecus_priam.k141_638794                              732 24 -     19483 GAAC--ACCTTAACGCCCTGTTA-----TT--C
i Semnopithecus_priam.k141_638794                        N 0 C 0
s Semnopithecus_schistaceus.k141_1584426                       796 24 +      7198 GAAC--ACCTTAACGCCCTGTTA-----TT--C
i Semnopithecus_schistaceus.k141_1584426                 N 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9054 24 +     15514 GAAC--ACCTTAACGCCCTGTTA-----TT--C
i Semnopithecus_vetulus.k141_1200928                     N 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                     8727 25 -     12148 TAAT--TCCTAAGCTGTCCT-AAA---ATT--T
i Sigmodon_hispidus.SigHis_scaffold_60841                N 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            186887 22 -    191337 CAGC--ACCTCAACCAT-TG-AAA---AT----
i Solenodon_paradoxus.SolPar_flattened_line_5840         N 0 C 0
s Sorex_araneus.JH798187.1                                13646244 23 -  18376816 CAGC--ATCTAAACCACCTT-AAA---Aa----
i Sorex_araneus.JH798187.1                               N 0 I 11
s Spermophilus_dauricus.KZ294078.1                         1947307 25 -   3870691 GAGT--ACCTAACCTGcctt-aa---aatt--c
i Spermophilus_dauricus.KZ294078.1                       N 0 I 10
s Spilogale_gracilis.SpiGra_flattened_line_13525             26399 24 +     97271 GAGC--ACCTAAGCCACCTT-TAA---ATT---
i Spilogale_gracilis.SpiGra_flattened_line_13525         N 0 I 11
s Suricata_suricatta.SurSur_flattened_line_6629               6358 24 -    196729 GAGC--ACCTAATCCACCTT-TAA---ATT---
i Suricata_suricatta.SurSur_flattened_line_6629          N 0 I 2
s Sus_scrofa.CM000828.4                                   62881376 24 -  69701581 GAAT--ACCTAAACCACCTC-AAA---Att---
i Sus_scrofa.CM000828.4                                  N 0 I 2
s Symphalangus_syndactylus.tarseq_199                      1087030 23 -   1523678 AAAC--ACCCAAACACCCTA-AA-----TT--C
i Symphalangus_syndactylus.tarseq_199                    N 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6015 24 +     41958 GAGC--ACCTAACCCACCTT-CCA---ATT---
i Tadarida_brasiliensis.TadBra_scaffold_25820            N 0 I 2
s Tamandua_tetradactyla.TamTet_scaffold_1782                 68643 11 +    116680 GAAC--ACCTACA--------------------
i Tamandua_tetradactyla.TamTet_scaffold_1782             N 0 I 3
s Tapirus_indicus.TapInd_scaffold_9301                      114368 24 -    156842 GAAC--ACCTAAACCACCTT-AAA---ATT---
i Tapirus_indicus.TapInd_scaffold_9301                   N 0 I 2
s Tapirus_terrestris.TapTer_scaffold_755                    382831 24 +    539355 GAAC--ACCTAAACCACCTT-AAA---ATT---
i Tapirus_terrestris.TapTer_scaffold_755                 N 0 I 2
s Tarsius_lariang.k141_1598868                                8747 23 -     11412 GAGA--ATCCACACCACCTA-AA-----AG--C
i Tarsius_lariang.k141_1598868                           N 0 C 0
s Tarsius_wallacei.k141_780063                               13463 23 +     25099 GAGA--ATCCACACCACCTA-AA-----AG--C
i Tarsius_wallacei.k141_780063                           N 0 C 0
s Theropithecus_gelada.CM009954.1                        186422058 24 + 186847797 GAAC--ACCTTAATGCCCTATTA-----TT--C
i Theropithecus_gelada.CM009954.1                        N 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              102243 25 +    114563 GAGC--ACCTACACCTCCTT-CA---CATT--C
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           N 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                    683 24 +      8208 GAGC--ACCTAAACCACCTT-AAA---C-G--T
i Tolypeutes_matacus.TolMat_scaffold_228639              N 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78161 24 +    610378 GAGG--ACCTGAACCACCCT-AGA---ATT---
i Tonatia_saurophila.TonSau_scaffold_294                 N 0 I 2
s Trachypithecus_auratus.k141_722599                          4790 24 -     20410 GAAC--ACCTTAACGCCCTGTTA-----TT--C
i Trachypithecus_auratus.k141_722599                     N 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     8984 24 +     15221 GAAC--ACCTTAACGCCCTGTTA-----TT--C
i Trachypithecus_crepusculus.k141_1194022                N 0 C 0
s Trachypithecus_cristatus.k141_580354                        4890 24 +     19930 GAAC--ACCTTAACGCCCTGTTA-----TT--C
i Trachypithecus_cristatus.k141_580354                   N 0 C 0
s Trachypithecus_francoisi.k141_1412647                       1318 24 -     19997 GAAC--ACCTTAACGCCCTGTTA-----TT--C
i Trachypithecus_francoisi.k141_1412647                  N 0 C 0
s Trachypithecus_geei.k141_277701                            41438 24 -     60166 GAAC--ACCTTAACGCCCTGTTA-----TT--C
i Trachypithecus_geei.k141_277701                        N 0 C 0
s Trachypithecus_germaini.k141_912491                         8911 24 -     27529 GAAC--ACCTTAACGCCCTGTTA-----TT--C
i Trachypithecus_germaini.k141_912491                    N 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      8847 24 -     18194 GAAC--ACCTTGACGCCCTGTTA-----TT--C
i Trachypithecus_hatinhensis.k141_143409                 N 0 C 0
s Trachypithecus_laotum.k141_907409                           2586 24 -     21137 GAAC--ACCTTGACGCCCTGTTA-----TT--C
i Trachypithecus_laotum.k141_907409                      N 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    1286 24 -     10723 GAAC--ACCTTAACGCCCTGTTA-----TT--C
i Trachypithecus_leucocephalus.k141_587342               N 0 C 0
s Trachypithecus_melamera.k141_434728                          442 24 +      9834 GAAC--ACCTTAACGCCCTGTTA-----TT--C
i Trachypithecus_melamera.k141_434728                    N 0 C 0
s Trachypithecus_obscurus.k141_190785                        18758 22 +     32220 GAAC--ACCTTAACG--CCGTTA-----TT--C
i Trachypithecus_obscurus.k141_190785                    N 0 C 0
s Trachypithecus_phayrei.ctg124                            5932854 24 +   6242583 GAAC--ACCTTAACGCCCTGTTA-----TT--C
i Trachypithecus_phayrei.ctg124                          N 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2100 24 +     20839 GAAC--ACCTTAACGCCCTGTTA-----TT--C
i Trachypithecus_pileatus.k141_2007326                   N 0 C 0
s Tragulus_javanicus.TraJav_scaffold_52459                   13918 24 -     14261 AAGC--ACCTGAACCACCTT-TA---TATT---
i Tragulus_javanicus.TraJav_scaffold_52459               N 0 I 2
s Trichechus_manatus.JH594705.1                            4291549 25 +  10818551 GAGC--ATCTAAACCACCTT-aa---aatt--c
i Trichechus_manatus.JH594705.1                          N 0 C 0
s Tupaia_chinensis.KB320699.1                              2148778 25 +   4065304 CAGC--CCCTAAACCACCTT-AAA--a-ct--c
i Tupaia_chinensis.KB320699.1                            N 0 I 8
s Tupaia_tana.TupTan_flattened_line_97126                     2404 24 -     10553 CAGC--CCCTA-ACCACCTT-AAA---ACT--C
i Tupaia_tana.TupTan_flattened_line_97126                N 0 I 8
s Tursiops_truncatus.MRVK01000835.1                       15736860 24 +  33153633 GAGT--ACCTAAACCACCTT-AAA---ATT---
i Tursiops_truncatus.MRVK01000835.1                      N 0 I 2
s Uropsilus_gracilis.UroGra_scaffold_12083                   50697 26 -     77625 GAGC--ACCTAAACCACCTT-AAGTTGCT----
i Uropsilus_gracilis.UroGra_scaffold_12083               N 0 C 0
s Ursus_maritimus.KK499267.1                               4846098 24 -   5085361 GAGC--ACCTAAACCacctt-ta---aatt---
i Ursus_maritimus.KK499267.1                             N 0 I 2
s Varecia_rubra.k141_590885                                   6646 25 +     50397 GAGC--ATCTAAACCACCTT-AA-----AATGT
i Varecia_rubra.k141_590885                              N 0 C 0
s Varecia_variegata.k141_1128296                              6696 25 +     24756 GAGC--ATCTAAACCACCTT-AA-----AATGT
i Varecia_variegata.k141_1128296                         N 0 C 0
s Vicugna_pacos.KN270157.1                                 5367553 24 -   5488506 GAGA--ACCTAAACCACCTT-AAA---Act---
i Vicugna_pacos.KN270157.1                               N 0 I 2
s Vulpes_lagopus.VulLag_flattened_line_30954                  6462 24 -     43706 GAGC--ACCTAAACCACCTT-TAA---ATT---
i Vulpes_lagopus.VulLag_flattened_line_30954             N 0 I 2
s Xerus_inauris.XerIna_scaffold_48378                        18836 25 -     24430 GAGT--ACCTAACCTGCCTT-AAA---ATT--C
i Xerus_inauris.XerIna_scaffold_48378                    N 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1033 24 +      2932 GAGC--ACCTAAACCACCTT-TAA---ATT---
i Zalophus_californianus.ZalCal_flattened_line_63728     N 0 I 2
s Zapus_hudsonius.ZapHud_scaffold_11398                       9129 25 +     63895 GAGT--GGCCAAACTGCCTT-AAA---ATC--C
i Zapus_hudsonius.ZapHud_scaffold_11398                  N 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            10552 24 +     12536 GAGT--ACCTAAACCACCTT-AAA---ATT---
i Ziphius_cavirostris.ZipCav_flattened_line_71469        N 0 I 2

a score=0.000000
s hg38.chrUn_KI270753v1                                          23 130 +     62944 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG----TGT-ATAAACTTCCCA-TATACCATAGCAGATGAGGATCCCT-T------------------------TGGTT----GTATCTTGTCAATACC-AA-A----------CAG-AA-------------TATGACAAGTGAT-AA--ACCCTT
s Acinonyx_jubatus.LLWD01001279.1                            816169 130 -   1699592 -ttcttt-t-t-c-c------tactttgcTTCTGGCTCTGTAC-TC-TAACA----TTT-GTAAACTTTCC-ATATGGCAAAGCAGATCAGAGTCCCT-T------------------------GGGGC----ATATCttgtaaataca-aa-a----------tga-aa-------------tatcatAAGTGAT-AA--AATGTT
i Acinonyx_jubatus.LLWD01001279.1                         I 2 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                      65839  53 +     87051 CCTTTTT-C-T-T-C------CATTTTGTT-CTTGGTATCTAC-TC-TAACA----TTT-ATAAACTTTCC----------------------------------------------------------------------------------------------------------------------------------------
i Acomys_cahirinus.AcoCah_scaffold_12655                  C 0 I 50
s Ailuropoda_melanoleuca.LNAT01000098.1                     9506124 129 -  29979442 -ttcttt-t-t-c-c------tactttgcT-CTTGCTCTGTAC-TT-CAACA----TTT-ATAAACTTTCC-ATATGGCAGAGTGGATGAAGGTCCCT-T------------------------TGGGC----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCGTAAGTGAT-AA--AATGTT
i Ailuropoda_melanoleuca.LNAT01000098.1                   I 2 C 0
s Ailurus_fulgens.LNAC01001112.1                              74415 130 -    347723 -ttcttt-t-t-ccc------cactttgCT-CTTGCTCTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGGTCCCT-T------------------------TGGGC----ATATCTTGTAAATACC-AA-A----------TCA-AA-------------TATcataagtaat-aa--aatgtt
i Ailurus_fulgens.LNAC01001112.1                          I 2 C 0
s Allactaga_bullata.AllBul_scaffold_9566                      64160 129 -     89534 CTTCTCT-T-T-C-A------CATTTTGCT-CTTGGTCTCTAC-TC-TCACA----TTT-ATAAGCTTTCC-ATATGGCCATGTAGATGAGGTTCCCT-T------------------------TGGGT----ATATCTTGTAAAT-CC-AA-A----------TGA-AA-------------TATCATATGTGAT-AA--AATGTT
i Allactaga_bullata.AllBul_scaffold_9566                  C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                     8501 129 -     52922 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG----GTT-ATAAGCTTTCC--TATACCAGAGCAGATGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAGGAGAT-AA--ACCCTT
i Allenopithecus_nigroviridis.k141_3361533                C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                           8426 129 -     28001 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG----GTT-ATAAGCTTTCC--TATACCAGAGCAGATGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AG-------------TATGACAGGTGAT-AA--ACCCTT
i Allochrocebus_lhoesti.k141_4309873                      C 0 C 0
s Allochrocebus_preussi.k141_310680                            8552 129 -      9772 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG----GTT-ATAAGCTTTCC--TATACCAGAGCAGATGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AG-------------TATGACAGGTGAT-AA--ACCCTT
i Allochrocebus_preussi.k141_310680                       C 0 C 0
s Allochrocebus_solatus.k141_2289504                          19664 129 +     20096 TTTCCTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG----GTT-ATAAGCTTTCC--TATACCAGAGCAGATGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AG-------------TATGACAGGTGAT-AA--ACCCTT
i Allochrocebus_solatus.k141_2289504                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                           674450 129 -   2318259 -TTCCTG-T-T-C-C------CATTTTGCT-TTTGCTCTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGATCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AATGTT
i Ammotragus_lervia.NIVO01071767.1                        I 2 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                       182330 129 +    412891 -TTCTTG-T-T-C-C------CGTGTTGCT-CTTGCTCTATAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAACAGATGAGCAGCCCA-T------------------------TGCGT----ACAGCATATAAATACC-AA-A----------TGA-AA-------------TATCACAAGCGAT-AA--AGCGTT
i Anoura_caudifer.AnoCau_scaffold_1412                    I 2 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469              96900 129 -    100397 -TTCCTG-T-T-C-C------CATTTTGCT-TTTGCTCTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGATCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TACCATAAGTGAT-AA--AATGTT
i Antilocapra_americana.AntAmePen_scaffold_12469          I 2 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                        6403 130 +     20879 CTTTCAT-T-T-T-A------CATTTTGCT-CTTACTTTCCAC-TC-TAACA----TTT-GCAAACTTTCC-ATATGGCAAAGCAGATGAGAATCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCAGACAAGAT-AA--AATGTT
i Aplodontia_rufa.AprRuf_scaffold_68852                   C 0 C 0
s Arctocebus_calabarensis.k141_1894080                         5158 129 +      5713 TTCTTTT-T-T-T-C------CACTTTACT-CTTGCTTTCTGC-TC-TAACA----TTT-ATAAGCTTTCC-ACCTGACAAAGTCAATGACGATCTCT-T------------------------TGGGT----ATATCTTATAAATACA-GA-A----------TAG-AA-------------TGTTATAAGTGAA-AA--AA-GTC
i Arctocebus_calabarensis.k141_1894080                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                   1682 129 +     43469 -TTCTTG-T-T-C-C------CGTGTGGCT-CTTGCTCGGCAC-GC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAACAGATGAGCAGTGCA-T------------------------TGGGT----ACAGCATGTAAATACC-AA-G----------TGA-AA-------------TATCATAAGTGAT-AA--AGCGTT
i Artibeus_jamaicensis.ArtJam_scaffold_25439              I 2 C 0
s Avahi_laniger.k141_765380                                   48376 129 -     92717 TTCCT-T-T-T-C-C------CATTTTGCT-CTTGCTCTCTCC-TC-TAACA----TTT-GTGAACTTTCC-ATCTGGCAAAGTGGATGAGGATCTCT-T------------------------TGGGT----ATATCTTGTAAATATC-GA-C----------TAG-AA-------------TATTATAAGTGAT-AA--AATGTC
i Avahi_laniger.k141_765380                               C 0 C 0
s Avahi_peyrierasi.k141_1424874                               48973 129 +     85213 TTCCT-T-T-T-C-C------CATTTTGCT-CTTGCTCTCTCC-TC-TAACA----TTT-GTGAACTTTCC-ATCTGGCAAAGTGGATGAGGATCTCT-T------------------------TGGGT----ATATCTTGTAAATATC-GA-C----------TAG-AA-------------TATTATAAGTGAT-AA--AATGTC
i Avahi_peyrierasi.k141_1424874                           C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    15190742 129 +  23207421 -ttcttg-t-t-C-C------CATTTTGCT-CTTGCTCTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAACAGATGAGAGTCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AACATT
i Balaenoptera_acutorostrata.KI537508.1                   I 2 C 0
s Balaenoptera_bonaerensis.DF707048.1                          1208 129 -     18090 -ttcttg-t-t-C-C------CATTTTGCT-CTTGCTCTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAACAGATGAGAGTCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AACATT
i Balaenoptera_bonaerensis.DF707048.1                     I 2 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                     25372 129 +     34529 -TTCCTG-T-T-C-C------CATTTTGCT-TTTGCTCTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGATCCCT-T------------------------TGGGT----ATATCTTATAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AATGTT
i Beatragus_hunteri.BeaHun_scaffold_50177                 I 2 C 0
s Bison_bison.KN261452.1                                     198122 129 -    288883 -TTCCTG-T-T-C-C------CATTTTGCT-TTTGCTCCGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGATCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AACGTT
i Bison_bison.KN261452.1                                  I 2 C 0
s Bos_indicus.CM003047.1                                   20271321 129 +  48749331 -TTCCTG-T-T-C-C------CATTTTGCT-TTTGCTCCGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGATCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AACGTT
i Bos_indicus.CM003047.1                                  I 2 C 0
s Bos_mutus.JH880303.1                                      1123877 129 -   1948126 -TTCCTG-T-T-C-C------CATTTTGCT-TTTGCTCCGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGATCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AACGTT
i Bos_mutus.JH880303.1                                    I 2 C 0
s Bos_taurus.CM000203.6                                    18081959 129 +  45695690 -TTCCTG-T-T-C-C------CATTTTGCT-TTTGCTCCGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGATCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AACGTT
i Bos_taurus.CM000203.6                                   I 2 C 0
s Bubalus_bubalis.KI419123.1                                2817450 129 +   4408762 -TTCCTG-T-T-C-C------CATTTTGCT-TTTGCTCCGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGATCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AATGTT
i Bubalus_bubalis.KI419123.1                              I 2 C 0
s Camelus_bactrianus.KN276810.1                             9998122 129 -  17673402 -TTCTTG-t-t-c-c------catttctct-cttgctctgtaC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGGTCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCGTAAGTGAT-AA--AATGTT
i Camelus_bactrianus.KN276810.1                           I 2 C 0
s Camelus_dromedarius.KN272107.1                            2330577 129 -   7040546 -TTCTTG-t-t-c-c------catttctct-cttgctctgtaC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGGTCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCGTAAGTGAT-AA--AATGTT
i Camelus_dromedarius.KN272107.1                          I 2 C 0
s Camelus_ferus.KB017975.1                                   398830 129 -   1652518 -TTCTTG-t-t-c-c------catttctct-cttgctctgtaC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGGTCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AATGTT
i Camelus_ferus.KB017975.1                                I 2 C 0
s CanFam4.chr16                                            17794925 130 -  60362399 -TTCTTT-T-TCC-C------CACTCTTCT-CTTGCTCTATAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGGTCCCT-T------------------------TGGGC----ATATCATGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AATGTT
i CanFam4.chr16                                           I 2 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                     180988 130 -    185531 -TTCTTT-T-TCC-C------CACTCTTCT-CTTGCTCTATAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGGTCCCT-T------------------------TGGGC----ATATCATGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AATGTT
i Canis_lupus_VD.CanFam_VD_scaffold_7008                  I 2 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          9030376 130 -   9314153 -ttcttt-t-tcc-c------cactcTTCT-CTTGCTCTATAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGGTCCCT-T------------------------TGGGC----ATATCATGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AATGTT
i Canis_lupus_dingo.QKWQ01000480.1                        I 2 C 0
s Canis_lupus_familiaris.chr16                             17954635 130 -  59632846 -ttcttt-t-tcc-c------cactcTTCT-CTTGCTCTATAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGGTCCCT-T------------------------TGGGC----ATATCATGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AATGTT
i Canis_lupus_familiaris.chr16                            I 2 C 0
s Canis_lupus_orion.HG994398.1                             18495876 130 +  63665305 -ttcttt-t-tcc-c------cactcTTCT-CTTGCTCTATAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGAGTCCCT-T------------------------TGGGC----ATATCATGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AATGTT
i Canis_lupus_orion.HG994398.1                            I 2 C 0
s Capra_aegagrus.CM003241.1                                18828567 129 +  46296322 -TTCCTG-T-T-C-C------CATTTTGCT-TTTGCTCTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGATCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AATGTT
i Capra_aegagrus.CM003241.1                               I 2 C 0
s Capra_hircus.CM004588.1                                  18059287 129 -  44709034 -TTCCTG-T-T-C-C------Cattttgct-tttgctctgtaC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGATCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AATGTT
i Capra_hircus.CM004588.1                                 I 2 C 0
s Capromys_pilorides.CapPil_scaffold_65020                      197 130 -     12242 CTTCCT-TT-T-T-G------CAGTTTGCT-CTGGCTCTGTAC-TG-TAACA----TTT-ATAAACTTTCC-ATATGGCACAGCAGATGAGGATCCCG-T------------------------TGAGT----ATATCTTATAAATACC-AA-A----------TGA-AA-------------TATCACACGTGCT-AA--AATGTT
i Capromys_pilorides.CapPil_scaffold_65020                C 0 C 0
s Carlito_syrichta.NW_007259797.1                            139871 152 -    496798 TCTTTTG-T-C-T-C------CATTTTGTT-CATGCTGTCTCC-TC-TAACA----TTT-ACAGACTTTCA--AATGGCAAAGCAAGTACAGATCACT-T------------------------TGGGC----AAGTCTTGTGAATATC-AC-GAGACTATCACCAG-CCCCGTTTGGGGTTTTATCACAAGTGAT-AG--AATGTT
i Carlito_syrichta.NW_007259797.1                         C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                 2100 129 -     11696 -TTCTGG-T-C-C-C------CGCGTCGTT-CTTGCTCTGTAC-TC-TACCA----TTT-ATACACGTTCC-ATATGGCAAAACAGATGAGCAGCCCA-T------------------------TGGGT----ACAGTGCGTAAATACC-AA-G----------TGA-AA-------------TATCATAAGTGAT-AA--AGCGTT
i Carollia_perspicillata.CarPer_scaffold_92756            I 2 C 0
s Castor_canadensis.CasCan_scaffold_2074                     132858 130 +    179628 CCTCTTT-T-T-C-G------CATTTTGCT-CTTAGTCTCTAC-TC-TAATA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGATCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATACGTGAT-AA--AATGTT
i Castor_canadensis.CasCan_scaffold_2074                  C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                      87912 120 +    217609 -TTCTTG-T-T-C-C------CATTTTGCT-CTTGGTCTGTAC-TC-TAACA----T----------TTCC-ATATGGCAAAGCAGATGAGCGTCCCT-T------------------------GGGGT----ATATCTTGTAAGTACC-AA-A----------TGA-AA-------------TATCGTAAGTGAT-AA--AACGTT
i Catagonus_wagneri.CatWag_scaffold_2839                  I 2 C 0
s Cavia_aperea.AVPZ01000300.1                              18346701 130 -  23392119 CTTCTA-TT-T-G-G------CAGTTTGCT-CTTGCTCTGTAG-TG-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGATCCCA-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCACACGTTGT-AA--AATGTT
i Cavia_aperea.AVPZ01000300.1                             C 0 C 0
s Cavia_porcellus.DS562891.1                               18358961 130 -  23407841 CTTCTA-TT-T-G-G------CAGTTTGCT-CTTGCTCTGTAG-TG-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGATCCCA-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCACACGTTGT-AA--AATGTT
i Cavia_porcellus.DS562891.1                              C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                         97836 130 +    143979 CTTCTA-TT-T-G-G------CAGTTTGCT-CTTGCTCTGTAG-TG-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGATCCCA-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCACACGTTGT-AA--AATGTT
i Cavia_tschudii.CavTsc_scaffold_8919                     C 0 C 0
s Cephalopachus_bancanus.k141_2037105                          3767 152 -      8605 TCTTTTG-T-C-T-C------CATTTTGTT-CATGCTGTCTCC-TC-TAACA----TTT-ACAGACTTTCA--AATGGCAAAGCAAGTACAGATCACT-T------------------------TGGGC----AAGTCTTGTAAGTATC-AC-GAGACTATCACCAG-CCCCGCTTGGGGTTTTATCACAAGTGAT-AG--AATGTT
i Cephalopachus_bancanus.k141_2037105                     C 0 C 0
s Ceratotherium_simum.JH767749.1                           12227071 129 +  27778364 -ttcttg-t-t-C-C------CATTTTGCT-CATGCTCTGCAC-TC-TAACG----TTT-ATAAACTTTCC-ATATGGCAACGCAGATGAGAGTCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AACGTT
i Ceratotherium_simum.JH767749.1                          I 2 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804           1789 129 -      3715 -TTCTTG-T-T-C-C------CATTTTGCT-CATGCTCTGCAC-TC-TAACG----TTT-ATAAACTTTCC-ATATGGCAACGCAGATGAGAGTCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AACGTT
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804      I 2 C 0
s Cercocebus_atys.KQ010504.1                                4469466 133 +   4669795 TTTCTTT-A-C-T-C------CACtctgct-cctgctcattcc-tc-tcatggTTTGTT-ATAAGCTTTCC--TATACCAGAGCAGGTGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAGGGGAT-AA--ACCCTT
i Cercocebus_atys.KQ010504.1                              C 0 C 0
s Cercocebus_chrysogaster.k141_393940                          8015 133 -     19203 TTTCTTT-A-C-T-C------CACTCTGCT-CCTGCTCATTCC-TC-TAATGGTTTGTT-ATAAGCTTTCC--TATACCAGAGCAGGTGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAGATGAT-AA--ACCCTT
i Cercocebus_chrysogaster.k141_393940                     C 0 C 0
s Cercocebus_lunulatus.k141_3846941                            2434 133 +      8260 TTTCTTT-A-C-T-C------CACTCTGCT-CCTGCTCATTCC-TC-TAATGGTTTGTT-ATAAGCTTTCC--TATACCAGAGCAGGTGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAGGTGAT-AA--ACCCTT
i Cercocebus_lunulatus.k141_3846941                       C 0 C 0
s Cercocebus_torquatus.k141_3057011                            2664 133 +     27781 TTTCTTT-A-C-T-C------CACTCTGCT-CCTGCTCATTCC-TC-TCATGGTTTGTT-ATAAGCTTTCC--TATACCAGAGCAGGTGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAGGGGAT-AA--ACCCTT
i Cercocebus_torquatus.k141_3057011                       C 0 C 0
s Cercopithecus_ascanius.k141_1024104                          2814 129 -     20310 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG----GTT-ATAAGCTTTCC--TATACCAGAGCAGATGAGGATCCCT-T------------------------TGGTC----ATATCTTGTCAATACC-AA-A----------TAG-AA-------------TAGGACAGGAGAT-AA--ACCCTT
i Cercopithecus_ascanius.k141_1024104                     C 0 C 0
s Cercopithecus_cephus.k141_1078548                            5798 129 +     29689 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG----GTT-ATAAGCTTTCC--TATACCAGAGCAGATGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TAGGACAGGAGAT-AA--ACCCTT
i Cercopithecus_cephus.k141_1078548                       C 0 C 0
s Cercopithecus_diana.k141_2427854                              151 129 +      9989 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG----GTT-ATAAGCTTTCC--TATACTAGAGCACATGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TGG-AA-------------TATGACAGGTGAT-AA--ACCCTT
i Cercopithecus_diana.k141_2427854                        C 0 C 0
s Cercopithecus_hamlyni.k141_187466                            8486 129 -     27936 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG----GTT-ATAAGCTTTCC--TATACTAGAGCAGATGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAGGAGAT-AA--ACCCTT
i Cercopithecus_hamlyni.k141_187466                       C 0 C 0
s Cercopithecus_lowei.k141_457449                              8505 129 -     11289 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG----GTT-ATAAGTTTTCC--TATACCAGAGCAGATGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TAGGACAGGAGAT-AA--ACCCTT
i Cercopithecus_lowei.k141_457449                         C 0 C 0
s Cercopithecus_albogularis.ctg5                                 38810881 129 +  39242232 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG----GTT-ATAAGCTTTCC--TATACCAGAGCAGATGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TAGGACAGGAGAT-AA--ACCCTT
i Cercopithecus_albogularis.ctg5                                C 0 C 0
s Cercopithecus_mona.ctg39                                 21216572 129 -  21565898 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG----GTT-ATAAGCTTTCC--TATACCAGAGCAGATGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TAGGACAGGAGAT-AA--ACCCTT
i Cercopithecus_mona.ctg39                                C 0 C 0
s Cercopithecus_neglectus.k141_2526306                        33692 129 -     53127 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG----GTT-ATAAGTTTTCC--TATACCAGAGCAGATGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TAGGACAGGAGAT-AA--ACCCTT
i Cercopithecus_neglectus.k141_2526306                    C 0 C 0
s Cercopithecus_nictitans.k141_3278028                          984 129 +      7159 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG----GTT-ATAAGCTTTCC--TATACCAGAGCAGATGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TAGGACAGGAGAT-AA--ACCCTT
i Cercopithecus_nictitans.k141_3278028                    C 0 C 0
s Cercopithecus_petaurista.k141_807961                         8497 129 -     27947 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG----GTT-ATAAGCTTTCC--TATACCAGAGCAGATGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TAGGACAGGAGAT-AA--GCCCTT
i Cercopithecus_petaurista.k141_807961                    C 0 C 0
s Cercopithecus_pogonias.k141_822820                           8473 129 +     17596 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG----GTT-ACAAGTTTTCC--TATACCAGAGCAGATGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TAGGACAGGAGAT-AA--ACCCTT
i Cercopithecus_pogonias.k141_822820                      C 0 C 0
s Cercopithecus_roloway.k141_3180641                          38967 129 -     41420 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG----GTT-ATAAGCTTTCC--TGTACCAGAGCAGATGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TAGGACAGGAGAT-AA--ACCCTT
i Cercopithecus_roloway.k141_3180641                      C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060             3710 131 -      6351 CCTTCTT-T-T-T-C------CATTTTTCT-CTGCCTTTCTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAAGGACCCTTT------------------------GGGGT----ATATCTTATAAATTCC-AA-A----------TGA-AA-------------GATCAGAAGTGAT-AA--GAAGTT
i Chaetophractus_vellerosus.ChaVel_scaffold_229060        C 0 C 0
s Cheirogaleus_major.k141_1490224                             60712 129 +     61209 TTCCT-T-T-T-C-C------CATTTTGCT-GTTGCTCCATCC-TC-TAACA----TTT-GTAAACTTTCC-ATCTCGCAAAGTGGATGAAGATCTCT-T------------------------TGGGT----ATATCTTGTAAATATC-GA-A----------TAG-AA-------------TATTATAAGTGAT-AA--AATATC
i Cheirogaleus_major.k141_1490224                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                            11092 129 +     57038 TTCCT-T-T-T-C-C------CATTTTGCT-CTTGCTCCATCC-TC-TAACA----TTT-GTAAACTTTCC-ATCTGGGAAAGTGGATAAGGATCTCT-T------------------------TGGGT----ATATCTTGTAAATATC-GA-A----------TAG-AA-------------TATTATAAGTGAT-AA--AATATC
i Cheirogaleus_medius.k141_1055463                        C 0 C 0
s Chinchilla_lanigera.JH722012.1                            1247744 129 +   2543920 cttcat-tt-t-t-a------caGTTTGCT-CTCGCTCTGAAC-TG-TAACA----TTT-ACAAACTTTCC-ATATGGCAAAGCAAATGAGGATCC-A-T------------------------TGGGT----ATATCTTGTAAATACC-GA-A----------TGA-AA-------------TATCACACGTGGT-AA--AATCTT
i Chinchilla_lanigera.JH722012.1                          C 0 C 0
s Chlorocebus_aethiops.ctg25                               18422436 129 -  18827391 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGTTTATTCC-TC-TAATG----GTT-ATAAGCTTTCC--TATACCAGAGCAGATGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AG-------------TATGACAGGTGAT-AA--ACCCTT
i Chlorocebus_aethiops.ctg25                              C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                         8879 129 -     50209 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGTTCATTCC-TC-TAATG----GTT-ATAAGCTTTCC--TATACCAGAGCAGATGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAGGTGAT-AA--ACCCTT
i Chlorocebus_pygerythrus.k141_1025673                    C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                          135415884 129 + 135778131 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGTTCATTCC-TC-TAATG----GTT-ATAAGCTTTCC--TATACCAGAGCAGATGAGGATCCCT-T------------------------TGGTC----ATATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAGGCGAT-AA--ACCCTT
i Chlorocebus_sabaeus.CM001947.1                          C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                  14334 130 +     19366 CCTCCTT-T-T-T-C------CATTTTGCT-CTGGCTTTCTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGGTCCCTTT------------------------TGGGT----TTTTCTTGTAAATACC-AA-A----------TGA-AA-------------GATC-GAAGTGAT-AA--AAAGTT
i Choloepus_didactylus.ChoDid_scaffold_45914              I 3 C 0
s Choloepus_hoffmanni.KN194906.1                             169437 130 +    839153 CCTCCTT-T-T-T-C------CATTTTGCT-CTGGCTTTCTAT-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGGTcccttt------------------------tgggt----ttttcttgtaAATACC-AA-A----------TGA-AA-------------GACC-GAAGTGAT-AA--AAAGTT
i Choloepus_hoffmanni.KN194906.1                          I 3 C 0
s Colobus_angolensis.KN981557.1                             1904393 128 +   2368649 TTTCTTT-A-C-T-C------CATTCcgct-cctgctcattcc-tc-taaTG-----GT-ATCAGCTTTCC--TACACCAGAGCACATGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAAGACC-AA-A----------TAG-AA-------------TATGACAAGCGAT-AG--ACCCTT
i Colobus_angolensis.KN981557.1                           C 0 C 0
s Colobus_guereza.LG01                                    199944011 128 + 200372422 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG-----GT-ATCAGCTTTCC--TACACCAGAGCACATGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAAGACC-AA-A----------TAG-AA-------------TACGACAAGTGAT-AA--ACCCTT
i Colobus_guereza.LG01                                    C 0 C 0
s Colobus_polykomos.k141_906115                               30906 127 +     84244 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG-----GT-ATCAGCTTTCC--TACAGCAGAGCACGTGAGGATCCCT-T------------------------TG-TC----GTATCTTGTCAAGACC-AA-A----------TAG-AA-------------TACGACAAGTGAT-AA--ACCCTT
i Colobus_polykomos.k141_906115                           C 0 C 0
s Condylura_cristata.JH655891.1                            17545158 128 -  53390261 --tcttt-t-t-c-c------ctttttgct-cTTGGTCTGTAA-GC-TACCA----CTT-AAAAACTTTCC-ATATGGCAAAGCAGATGAGGGTCCCT-T------------------------TGGGT----ATATCTTGGAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AACATT
i Condylura_cristata.JH655891.1                           C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438            9737 129 -     20389 -TCCTTG-C-T-C-C------CATTTTGCC-CATGCCCTGCAC-TC-TAACA----TTT-ATGACCTTTCC-ATATGGCAAAGAAAATGAGGGTCACT-T------------------------TGGGT----ATATCATGTAAACACC-AA-A----------TGA-AA-------------TAGCATAAGTGTT-AA--AGCATT
i Craseonycteris_thonglongyai.CraTho_scaffold_58438       I 2 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                  46058 137 +     63868 CTTCTTT-C-T-T-A------CATTTTGTT-CTTGTGT----T-TC-TAACA----CTT-ATAAATTTCCC-ATGTGGCAAAGCAGCTGAGGATCCCA-TTGGGTATATCAATGAGGATCCATTTGGGT----ATATCATGTAAATTCC-AA-A----------TGA-AA-------------TATCATAA----------------
i Cricetomys_gambianus.CriGam_scaffold_18520              C 0 I 8
s Cricetulus_griseus.LT883664.1                            11662865 132 + 224834208 cttcttt-c-t-t-a------tattttgcc-CTTGGTATCTAT-GC-TAACC----ATT-ATGAACCTTCC-ATGTGGCAAAGTAAATGACAATTCTA-T------------------------TGGAT----ATGTCATGTAAATATC-AA-A----------TGT-GA-------------TATCATAAGTAAT-AAAAAATGTG
i Cricetulus_griseus.LT883664.1                           C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_603213                331 127 +      1923 --TCTTT-T-T-C-C------TCTTTTCCT-CTCGCTCTATAC-TT-TAACA----TTT-AAAAACTTTCC-ATATGGGAAAGCAGATG-GGGTCCCT-G------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------GGA-AA-------------TATCATAAGTGAT-AA--AATGTT
i Crocidura_indochinensis.CroInd_scaffold_603213          I 4 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              17182 129 -     87169 -TTCTTT-T-T-C-C------CACTTTGCT-CTGGCTCTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGAGTCCCT-T------------------------TGGGC----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AATGTT
i Cryptoprocta_ferox.CryFer_flattened_line_16129          I 2 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                     834003 129 +   1526836 CTTATT--T-T-T-A------CAGTTTGCA-CTTGCTCTGTAC-TG-TAACA----CTT-AGAAACTTTCC-ATATGGCAAAGCAGATGAGGATCCCT-T------------------------TGGGT----ATACCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATACGTGGT-AA--AATGTT
i Ctenodactylus_gundi.CteGun_scaffold_65                  C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                   34607 128 +     51376 C---TT-TT-T-T-A------TAGTTTGCT-CTTGCTCTGTAC-TG-TAACA----TTT-ACAAACTTTCC-ATATGGCAAAGCAGATGAGGGTCCCG-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCACACGTGGT-AAA-AATGTT
i Ctenomys_sociabilis.CteSoc_scaffold_29687               C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                  2078 130 +      5455 CTTCTT-TT-T-T-G------CAGTTTTCT-CTTGCTCTGTAC-TG-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGATCCCG-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCACACGTTGT-AA--AATGTT
i Cuniculus_paca.CunPac_flattened_line_231100             C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793              468 130 +      3576 TTTCTT-TT-C-C-G------CAGTTTGCT-CGTGCTCTGTAC-TG-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAAGATCCCA-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCACACGTTGT-AA--AATGTT
i Dasyprocta_punctata.DasPun_flattened_line_206793        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                             59890 131 +   2246927 ccttctt-t-t-t-c------catttttct-ctggcTTTCTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGGACTCTTT------------------------TGGGT----ATATCTTATAAATTCC-AA-A----------TGA-AA-------------GATCAGAAATGAT-AA--GAAGTT
i Dasypus_novemcinctus.JH564415.1                         C 0 C 0
s Daubentonia_madagascariensis.ctg71                       12532065 130 -  12879189 TTTCTTT-T-T-T-C------CACTGTGCT-CTTGCTCTCTAC-TC-TAACA----TTC-ACAAGCTTTCC-ATCTGGCAAAATGGATGAGGGTCTCT-T------------------------TGGGT----ATATCTTATAAATATC-GA-A----------TAG-AA-------------TATTATAAGTGAT-AA--AATGTC
i Daubentonia_madagascariensis.ctg71                      C 0 C 0
s Delphinapterus_leucas.KZ290073.1                         16810378 129 +  35494412 -TTCTTG-T-T-C-C------CATTTTGTT-CTTGCTCTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAACAGATGAGAGTCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AACATT
i Delphinapterus_leucas.KZ290073.1                        I 2 C 0
s Desmodus_rotundus.KZ672289.1                              8627133 129 +  20541912 -TTCTTG-T-T-C-C------CATTTTGCT-CCTGCTCTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATACGGCAAACCAGATGAGCAGCCCA-T------------------------TGGGT----ACAGCGTGTAAATACC-AA-A----------TGA-AA-------------TAGCATAAGTGAT-AA--AGCGTT
i Desmodus_rotundus.KZ672289.1                            I 2 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                   668601 129 +   1390856 -ttcttg-t-t-C-C------CATTTTGCT-CATGCTCTGCAC-TC-TAACG----TTT-ATAAACTTTCC-ATATGGAAAAGCAGATGAGAGTCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AACATT
i Dicerorhinus_sumatrensis.PEKH010002091.1                I 2 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                     1678 129 +    198055 -TTCTTG-T-T-C-C------CATTTTGCT-CGTGCTCTGCAC-TC-TAACG----TTT-ATAAACTTTCC-ATATGGCAACGCAGATGAGAGTCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AACATT
i Diceros_bicornis.DicBicMic_scaffold_5955                I 2 C 0
s Dinomys_branickii.DinBra_scaffold_21862                     33529 130 +     67921 CTTCTG-TT-T-T-A------CAGTTTGCT-CTCATTCTGTAC-TG-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGATCCCA-C------------------------TGGGT----ATATCTTGTAAATACC-AA-C----------TGA-AA-------------TATCACGTGTGAT-AA--AATGTT
i Dinomys_branickii.DinBra_scaffold_21862                 C 0 C 0
s Dipodomys_ordii.KN672350.1                               18894405  59 +  37912305 TTTGTTT-T-A-C-A------GATTTTACT-CTT-GTCTCTAC-TC-ACCCA----TTT-ATGAACTTCCC-ATGTGGC--------------------------------------------------------------------------------------------------------------------------------
i Dipodomys_ordii.KN672350.1                              C 0 I 582
s Dipodomys_stephensi.DipSte_scaffold_75855                   11126  59 +     14536 CTTGTTT-T-A-C-A------GATTTTACT-CTT-GTCTCTAC-TC-ACCCA----TTT-ATGAACTTCCC-ATGTGGC--------------------------------------------------------------------------------------------------------------------------------
i Dipodomys_stephensi.DipSte_scaffold_75855               C 0 I 45
s Dolichotis_patagonum.DolPat_scaffold_30833                  30723 130 -     42551 CTTCTT-TT-T-C-C------CAGTTTGCT-CTTGCTCTGTAC-TG-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGATCCCG-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCACACATTGT-AA--AATGTT
i Dolichotis_patagonum.DolPat_scaffold_30833              C 0 C 0
s Eidolon_helvum.KE759718.1                                    6639 129 +     11740 -TTCTTG-T-T-C-C------CATTTTCCT-CTTGCTCTGTAC-TC-TAACA----TTT-ATTAACTTTCC-ATATGGCAAAGCAGATGAGGGTCCCT-T------------------------TGGGT----ATATCATATAAACACC-AA-G----------TGA-AA-------------TATCATAAGTGAT-AA--AACGTT
i Eidolon_helvum.KE759718.1                               I 2 C 0
s Elaphurus_davidianus.JRFZ01104969.1                        309574 129 +    607251 -TTCCTG-T-T-C-C------CATTTTGCT-TTTGCTCTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGATCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AACGTT
i Elaphurus_davidianus.JRFZ01104969.1                     I 2 C 0
s Elephantulus_edwardii.JH947257.1                          1088232 136 +  10337057 ctctttt-t-t-t-ctcccccaattttgtt-ctttttctttgc-aa-taGAA----CTT-ATATAGTTCCC-ATATGGCAAAACAGATGAGGGTCCCT-T------------------------TGGGT----ATATCTTGCAAATACTGA--A----------CGA-AA-------------TATCCTAAGTGAT-AA--AACATT
i Elephantulus_edwardii.JH947257.1                        C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                           11654 131 -    110024 CTTCTTT-C-T-T-A------CAGTTTGCT-CTTGTTACCTAC-TC-TAACA----TTT-ATAAACTTTCC-ATGTGGCAAAGTAAATGAGAATCCTA-T------------------------TAGGT----ATTTCATATAAACagc-aa-a----------tga-aa-------------tatcatatgTGAT-AGA-AATGTG
i Ellobius_lutescens.LOEQ01008920.1                       C 0 C 0
s Ellobius_talpinus.LOJH01123422.1                             2610 131 +      5358 CTTCTTT-C-T-T-A------CAGTTTGCT-CTTGGTACCTAC-TC-TAACA----TTT-ATAAATTTTCC-ATGTGGTAAAGTAAATGAGAATCCTA-T------------------------TGGGT----ATTTCATATAAACAgc-aa-a----------tga-aa-------------tatcatatgTGAT-AGA-AATGTG
i Ellobius_talpinus.LOJH01123422.1                        C 0 C 0
s Enhydra_lutris.KZ291758.1                                16324991 129 -  41312741 -ttcttt-t-t-c-c------cactttGCT-CTTGCACTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGGTCCCT-T------------------------TGGGC----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AATGTT
i Enhydra_lutris.KZ291758.1                               I 2 C 0
s Eptesicus_fuscus.JH977646.1                               2142989 129 -  14770903 -TTCTTG-C-T-C-C------CAGTTTGCT-CTTGCTCTGTGT-CC-TAACA----TTT-ATAAACCTTCC-ATATGGCCAAGCAGATGAGCGACCCC-T------------------------TGGGT----ATAGCGTGTAAATACC-AA-G----------TGA-AA-------------TATCATAAATGAT-AA--AGCATT
i Eptesicus_fuscus.JH977646.1                             I 2 C 0
s Equus_asinus.JREZ01000139.1                               1278940 129 +   4378816 -TTCTTG-T-T-C-C------CATTTTGCT-CATGCTCAGCAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGAATCCCT-T------------------------TGGGG----GTATCTTGCAAATACC-AA-A----------TGA-AA-------------TATCGTAAGTGAT-AA--AACGTT
i Equus_asinus.JREZ01000139.1                             I 2 C 0
s Equus_caballus.CM000403.2                                18526761 129 -  39960074 -TTCTTG-T-T-C-C------CATTTTGCT-CATGCTCAGCAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGAATCCCT-T------------------------TGGGG----GTATCTTGCAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AACGTT
i Equus_caballus.CM000403.2                               I 2 C 0
s Equus_przewalskii.KK951119.1                                28776 129 +    498745 -TTCTTG-T-T-C-C------CATTTTGCT-CATGCTCAGCAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGAATCCCT-T------------------------TGGGG----GTATCTTGCAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AACGTT
i Equus_przewalskii.KK951119.1                            I 2 C 0
s Erinaceus_europaeus.JH835339.1                            3319970 128 -   7059049 --TATCT-T-T-C-C------CACTTTGCT-CTTGCTTTACAC-TC-TAACA----TTT-CTAAATTTTcc-atatggcaaagcagatgaAGATCCCT-T------------------------TGGGC----ATATCTAGTAAATGCC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AATGTT
i Erinaceus_europaeus.JH835339.1                          C 0 C 0
s Erythrocebus_patas.Contig38                              21199119 129 -  21539334 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG----GTT-ATAAGCTTTCC--TATACCAGAGCAGATGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAGGTGAC-AA--ACCCTT
i Erythrocebus_patas.Contig38                             C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968            10054 129 +    133382 -TTCTTG-T-T-C-C------CATTTTGCT-CTTGCTCTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAACAGATGAGAGTCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AG-------------TATCATAAGTGAT-AA--AACATT
i Eschrichtius_robustus.EscRob_flattened_line_8968        I 2 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514              23992 129 -     44125 -TTCTTG-T-T-C-C------CATTTTGCT-CTTGCTCTGTAT-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAACAGATGAGAGTCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AACATT
i Eubalaena_japonica.EubJap_flattened_line_31514          I 2 C 0
s Eulemur_albifrons.k141_342033                                9077 129 -     14127 TTCCT-T-T-T-C-C------CATTTTGCT-CTTGCTCTCTAT-GC-TAACA----TTT-GTAAACTTTCA-ATCTGGCAAGGTGGATGAGGATCTCT-T------------------------TGGAT----ATATCTTGTAAATATC-AA-A----------TAG-AA-------------TATTATAAGTGAC-AA--AATGTC
i Eulemur_albifrons.k141_342033                           C 0 C 0
s Eulemur_collaris.k141_377015                                 1767 129 -     16928 TTCCT-T-T-T-C-C------CATTTTGCT-CTTGCTCTCTAT-GC-TAACA----TTT-GTAAACTTTCA-ATCTGGCAAGGTGGATGAGGATCTCT-T------------------------TGGAT----ATATCTTGTAAATATC-AA-A----------TAG-AA-------------TATTATAAGTGAC-AA--AATGTC
i Eulemur_collaris.k141_377015                            C 0 C 0
s Eulemur_coronatus.k141_885031                               10798 129 -     25546 TTCCT-T-T-T-C-C------CATTTTGCT-CTTGCTCTCTAT-GC-TAACA----TTT-GTAAACTTTCA-ATCTGGCAAAGTGGATGAGGATCTCT-T------------------------TGGAT----ATATCTTGTAAATATC-AA-A----------TAG-AA-------------TATTATAAGTGAC-AA--AATGTC
i Eulemur_coronatus.k141_885031                           C 0 C 0
s Eulemur_flavifrons.k141_1184614                              7985 129 +     26330 TTCCT-T-T-T-C-C------CATTTTGCT-CTTGCTCTCTAT-GC-TAACA----TTT-GTAAACTTTCA-ATCTGGCAAAGTGGATGAGGATCTCT-T------------------------TGGAT----ATATCTTGTAAATATC-AA-A----------TAG-AA-------------TATTATAAGTGAC-AA--AATGTC
i Eulemur_flavifrons.k141_1184614                         C 0 C 0
s Eulemur_fulvus.k141_544389                                   9242 129 +     23973 TTCCT-T-T-T-C-C------CATTTTGCT-CTTGCTCTCTAT-GC-TAACA----TTT-GTAAACTTTCA-ATCTGGCAAGGTGGATGAGGATCTCT-T------------------------TGGAT----ATATCTTGTAAATATC-AA-A----------TAG-AA-------------TATTATAAGTGAC-AA--AATGTC
i Eulemur_fulvus.k141_544389                              C 0 C 0
s Eulemur_macaco.k141_1562045                                  7989 129 +     75513 TTCCT-T-T-T-C-C------CATTTTGCT-CTTGCTCTCTAT-GC-TAACA----TTT-GTAAACTTTCA-ATCTGGCAAAGTGGATGAGGATCTCT-T------------------------TGGAT----ATATCTTGTAAATATC-AA-A----------TAG-AA-------------TATTATAAGTGAC-AA--AATGTC
i Eulemur_macaco.k141_1562045                             C 0 C 0
s Eulemur_mongoz.k141_232305                                   5937 129 +     97555 TTCCT-T-T-T-C-C------CATTTTGCT-CTTGCTCTCTAT-GC-TAACA----TTT-GTAAACTTTCA-ATCTGGCAAAGTGGATGAGGATCTCT-T------------------------TGGAT----ATATCTTATAAATATC-AA-G----------TAG-AA-------------TATTATAAGTGAC-AA--AATGTC
i Eulemur_mongoz.k141_232305                              C 0 C 0
s Eulemur_rubriventer.k141_571033                              8871 129 +     26496 TTCCT-T-T-T-C-C------CATTTTGCT-CTTGCTCTCTAT-GC-TAACA----TTT-GTAAACTTTCA-ATCTGGCAAAGTGGATGAGGATCTCT-T------------------------TGGAT----ATATCTTGTAAATATC-AA-A----------TAG-AA-------------TATTATAAGTGAC-AA--AATGTC
i Eulemur_rubriventer.k141_571033                         C 0 C 0
s Eulemur_rufus.k141_2367191                                   1876 129 +      2552 TTCCT-T-T-T-C-C------CATTTTGCT-CTTGCTCTCTAT-GC-TAACA----TTT-GTAAACTTTCA-ATCTGGCAAGGTGGATGAGGATCTCT-T------------------------TGGAT----ATATCTTGTAAATATC-AA-A----------TAG-AA-------------TATTATAAGTGAC-AA--AATGTC
i Eulemur_rufus.k141_2367191                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                                9044 129 +    111500 TTCCT-T-T-T-C-C------CATTTTGCT-CTTGCTCTCTAT-GC-TAACA----TTT-GTAAACTTTCA-ATCTGGCAAAGTGGATGAGGATCTCT-T------------------------TGGAT----ATATCTTGTAAATATC-AA-A----------TAG-AA-------------TATTATAAGTGAC-AA--AATGTC
i Eulemur_sanfordi.k141_1122526                           C 0 C 0
s Felis_catus.CM001381.2                                   20225869 130 + 206538554 -ttcttt-t-t-c-c------cactttGCTTCTGGCTCTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGAGTCCCT-T------------------------GGGGC----ATATCttgtaaataca-aa-a----------tga-aa-------------tatcatAAGTGAT-AA--AATGTT
i Felis_catus.CM001381.2                                  I 2 C 0
s Felis_catus_fca126.CM031415.1                            20184598 130 + 205367284 -ttcttt-t-t-c-c------cactttgCTTCTGGCTCTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGAGTCCCT-T------------------------GGGGC----ATATCttgtaaataca-aa-a----------tga-aa-------------tatcatAAGTGAT-AA--AATGTT
i Felis_catus_fca126.CM031415.1                           I 2 C 0
s Felis_nigripes.FelNig_flattened_line_125938                  9712 130 -     11347 -TTCTTT-T-T-C-C------CACTTTGCTTCTGGCTCTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGAGTCCCT-T------------------------GGGGC----ATATCTTGTAAATACA-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AATGTT
i Felis_nigripes.FelNig_flattened_line_125938             I 2 C 0
s Fukomys_damarensis.KN121974.1                              847746 131 +   3816255 CTTCTT-TT-T-TAA------CAGTTTGCT-CTTGCTCTGTAC-TG-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAATATCCCA-T------------------------TGGGT----ATATCTTGAAAATACC-AA-A----------TGA-AA-------------CATCACACGTGGT-AA--AATGTT
i Fukomys_damarensis.KN121974.1                           C 0 C 0
s Galagoides_demidoff.k141_31856                               1860 127 -      3432 CTTCTTT-T-C-T-C------CACTTTGCT-CTTGCTCTCTAC-TC-TAACA----TTT-ATAAACTTTCC-ATCTGGAAAAGTCAATGAGGATCTTT-T------------------------GGGGC----ATATCTTATAAATATA-GG-A----------TAG-AA-------------TATTATAAGTGAA-AA--AGT---
i Galagoides_demidoff.k141_31856                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069                24644 130 +     26054 TTTCTTT-T-T-T-A------CATTTTGTT-CTTGCTCTCCAC-TC-TAACA----TTT-ATAAACTCTCC-ATATGGCAAAGCAGATGAGGATCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGG-AG-------------TATCATAAGTGAT-AA--AACGTT
i Galeopterus_variegatus.GalVar_scaffold_56069            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                      608078 129 -    660261 -TTCCTG-T-T-C-C------CATTTTGCT-TTTGCTCTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGATCCCT-C------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AACGTT
i Giraffa_tippelskirchi.LVKQ01S007888.1                   I 2 C 0
s Glis_glis.GliGli_scaffold_19807                             29485 126 +     49224 ----CTT-T-T-T-A------CATTTTGCT-CTTACTCTCTAC-TG-TAACA----TTT-GCACACTTTCC-ATATGGCAAAGCATATGAGGATCCCT-T------------------------TGGGT----ATATCTTGTCAATACC-AA-A----------TGT-AA-------------TATCATACATGAT-AA--AATGTT
i Glis_glis.GliGli_scaffold_19807                         I 2 C 0
s Gorilla_beringei.k141_2022027                                 671 130 +      3305 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCGTTCC-TC-TAATG----TGT-ATAAACTTCCCA-TATACCATAGCAGATGAGGATCCCT-T------------------------TGGTT----GTATCTTGTCAATACC-AA-A----------CAG-AA-------------TATGACAAGTGAT-AA--ACCCTT
i Gorilla_beringei.k141_2022027                           C 0 I 43
s Gorilla_gorilla.LT578341.1                              186331614 130 + 186649187 TTTCTTT-A-C-T-C------CATTctgct-cctgctcattcc-tc-taaTG----TGT-ATAAACTTCCCA-TATACCATAGCAGATGAGGATCCCT-T------------------------TGGTT----GTATCTTGTCAATACC-AA-A----------CAG-AA-------------TATGACAAGTGAT-AA--ACCCTT
i Gorilla_gorilla.LT578341.1                              n 364 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    29292 130 +     78134 CATCCTT-T-T-T-A------CATTTTGTT-CTTACTTGCTAC-TG-TAACA----TTT-TCACATTTCCC-ATATGGCAAAGCATAAGAGTATCCCT-G------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TAT-AA-------------TATCATACATGAT-AA--AATGTT
i Graphiurus_murinus.GraMur_scaffold_10447                C 0 C 0
s Hapalemur_alaotrensis.k141_170648                            2125 129 -     19426 TTCCT-T-T-T-C-C------CATTTTGCT-CTTGCTCTCTAT-GC-TAACA----TTT-GTAAACTTTCA-ATCTGGCAAAGTGGATGAGGATCTCT-T------------------------TGGGT----ATATCTTGTAAATATC-AA-A----------TAG-AA-------------TATTATAAGTGAT-AA--AATGTC
i Hapalemur_alaotrensis.k141_170648                       C 0 C 0
s Hapalemur_gilberti.k141_488810                               7271 129 -     15286 TTCCT-T-T-T-C-C------CATTTTGCT-CTTGCTCTCTAT-GC-TAACA----TTT-GTAAACTTTCA-ATCTGGCAAAGTGGATGAGGATCTCT-T------------------------TGGGT----ATATCTTGTAAATATC-AA-A----------TAG-AA-------------TATTATAAGTGAT-AA--AATGTC
i Hapalemur_gilberti.k141_488810                          C 0 C 0
s Hapalemur_griseus.k141_1511508                               8889 129 +     18253 TTCCT-T-T-T-C-C------CATTTTGCT-CTCGCTCTCTAT-GC-TAACG----TTT-GTAAACTTTCA-ATCTGGCAAAGTGGATGAGGATCTCT-T------------------------TGGGT----ATATCTTGTAAATATC-AA-A----------TAG-AA-------------TATTATAAGTGAT-AA--AATGTC
i Hapalemur_griseus.k141_1511508                          C 0 C 0
s Hapalemur_meridionalis.k141_248335                           9012 129 -     41752 TTCCT-T-T-T-C-C------CATTTTGCT-CTTGCTCTCTAT-GC-TAACA----TTT-GTAAACTTTCA-ATCTGGCAAAGTGGATGAGGATCTCT-T------------------------TGGGT----ATATCTTGTAAATATC-AA-A----------TAG-AA-------------TATTATAAGTGAT-AA--AATGTC
i Hapalemur_meridionalis.k141_248335                      C 0 C 0
s Hapalemur_occidentalis.k141_907772                           8833 129 -     16460 TTCCT-T-T-T-C-C------CATTTTGCT-CTTGCTCTCTAT-GC-TAACA----TTT-GTAAACTTTCA-ATCTGGCAAAGTGGATGAGGATCTCT-T------------------------TGGGT----ATATCTTGTAAATATC-AA-A----------TAG-AA-------------TATTATAAGTGAT-AA--AATGTC
i Hapalemur_occidentalis.k141_907772                      C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                230364 130 +    327341 -TTCTTT-T-T-CCC------CACTTTGCT-CTGGCTCTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGAAGAGAGTCCCT-C------------------------TGGGC----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AATGTT
i Helogale_parvula.HelPar_flattened_line_2585             I 2 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                  16774 127 +     36099 -TTCCTG-T-T-C-C------CATTTTGCT-TTTGCTCTATAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGATCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCAT--GTGAT-AA--AATGTT
i Hemitragus_hylocrius.HemHyl_scaffold_45859              I 2 C 0
s Heterocephalus_glaber.JH602082.1                         20658660 130 +  22651954 CTACTT-TT-T-T-A------CAGTGTGCT-CTTGCTCTGTAC-TG-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGATCCCA-T------------------------TGGGT----ATAtcttgtaaatacc-aa-a----------tga-aa-------------TATCACACTTGGT-AA--AATGTT
i Heterocephalus_glaber.JH602082.1                        C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_173205                 2561 130 -      3357 CTTCTTT-T-T-T-C------CATTTTGTT-CTTGCTCTCTGC-TA-TAACA----TTC-ATAAACTTTCC-ATATGGCAAAACGGCTGAGGATCCCT-T------------------------TGGGT----ACATCTTGCAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAG-AA--AACGTT
i Heterohyrax_brucei.HetBruBak_scaffold_173205            n 171 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076                111223 129 +    128679 -TTCTTC-T-T-C-T------CATTTTGTT-CTTGCTCTGTAC-TC-TAACA----TTT-ATCAACTTTCC-ATATGGCAAAGCAGATGAGGGGCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AACGTT
i Hippopotamus_amphibius.HipAmp_scaffold_9076             I 2 C 0
s Hipposideros_armiger.JXIK01000431.1                        107608 129 +   1711038 -TTCTTG-T-T-C-C------CACTTTGCT-CTCTCTCTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGGTCCCT-T------------------------TGGAT----ATATCATGTAAATACC-AA-A----------TGA-AG-------------TATCATAAGCAAT-AC--CGTGTT
i Hipposideros_armiger.JXIK01000431.1                     I 2 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171                39051 126 +     43066 -TTCTTG-T-T-C-C------CACGTTGCT-CTTGCTTTG-AC-TC-CAACA----TTT-AC--ACTTTCC-ATATGGCAGAGCAGATGAGGGTCCCT-T------------------------TGGAT----ATATCATGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGCGAT-AG--CGTGTT
i Hipposideros_galeritus.HipGal_scaffold_29171            I 2 C 0
s Hoolock_leuconedys.ctg274                                     428448 130 +    630532 TTTCTTT-A-C-T-C------CGTTCTCCT-CCTGCTCATTCC-TC-TAATG----TGC-ACAAACTTCCCG-TATACCAGAGCAGACAAGGATCCCT-T------------------------TGGTC----ATATCTTGTCAATAGC-AA-A----------TAG-AA-------------TATGACAAGTGAT-AA--ACCCTT
i Hoolock_leuconedys.ctg274                                  C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                   32458 130 +     55795 -TTCTTT-T-T-CCC------CACTTTGCT-CTGGCTCTGTAC-TC-TAACA----TGT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGAGTCCCT-T------------------------TGGGC----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AATGTT
i Hyaena_hyaena.HyaHya_flattened_line_26932               I 2 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117             19082 130 -    143317 CTTCTT-TT-T-C-A------CAGTTTTGT-CTTGCTCTGTAC-TG-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGATCCCG-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCACACGTTGT-AA--AATGTT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117         C 0 C 0
s Hylobates_agilis.k141_307679                                11366 130 -     15490 TTTCTTT-C-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG----TGC-ATAAACTTCCCA-TATACCAGAGCAGACAAGGATCCCT-T------------------------TGGTC----ATATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAAGTGAT-AA--ACCCTT
i Hylobates_agilis.k141_307679                            C 0 C 0
s Hylobates_klossii.k141_282416                               53371 130 +     67168 TTTCTTT-C-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG----TGC-ATAAACTTCCCA-TATACCAGAGCAGACAAGGATCCCT-T------------------------TGGTC----ATATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAAGTGAT-AA--ACCCTT
i Hylobates_klossii.k141_282416                           C 0 C 0
s Hylobates_pileatus_b.LG02                                      189536815 130 - 191637585 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG----TGC-ATAAACTTCCCA-TATACCAGAGCAGACAAGGATCCCT-T------------------------TGGTC----ATATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAAGTGAT-AA--ACCCTT
i Hylobates_pileatus_b.LG02                                      C 0 C 0
s Hylobates_pileatus_a.tarseq_633                             3329914 130 -  11177569 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG----TGC-ATAAACTTCCCA-TATACCAGAGCAGACAAGGATCCCT-T------------------------TGGTC----ATATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAAGTGAT-AA--ACCCTT
i Hylobates_pileatus_a.tarseq_633                           C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       80158 129 +    135385 CTTCTT--T-T-T-A------CAGTTTGCT-CTTGTTCTGTAC-TG-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGATCCCT-T------------------------TGGGT----ATATCTTGAAAATACC-AA-A----------TGA-AA-------------TATCACGCATGGC-AG--AATGTT
i Hystrix_cristata.HysCri_scaffold_5660                   C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     7513708 130 -   7955117 tttcctt-t-t-c-a------caTTTTGCT-CTGACTCTCCAC-TC-TAACA----TTT-GCAAACTTTCC-ATATGGCAAAGCAGATGAGGATCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATACATGAT-AA--AATGTT
i Ictidomys_tridecemlineatus.JH393364.1                   C 0 C 0
s Indri_indri.k141_3655594                                    17240 129 +     31101 TTCCT-T-T-T-C-C------CATTTTGCT-CTTGCTCTCTCC-TC-TAAAA----TTT-GTAAACTTTCC-ATCTGGCAAAGTAGATGAGGATCTCT-C------------------------TGGGT----ATATCTTGTAAATATC-AA-A----------TAG-AA-------------TATTGTAAGTGAT-AA--AATGTC
i Indri_indri.k141_3655594                                C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101                21595 129 +     23964 -TTCTCG-T-T-C-C------CATTTTGTT-CTTGCTCTGTAC-TC-TAACG----TTT-ATAAACTTTCC-ATATGGCAAAACAGATGAGAGTCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AACATC
i Inia_geoffrensis.IniGeo_flattened_line_48101            I 2 C 0
s Jaculus_jaculus.JH725527.1                                8270532 130 -   9596543 CTTCTCT-T-T-C-A------CAATTTGCT-CTTAGTCTGTAC-TA-TCACA----TTT-ATAAACTTTCC-ATATGGCAGTGTAGATGAGGTTCCCT-T------------------------TGGGT----ATATCTTGgaaatacc-aa-a----------aga-aa-------------tatcATATGTGAT-AA--AATGTT
i Jaculus_jaculus.JH725527.1                              C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                  862 129 -      3359 -TTCTTG-T-T-C-C------CATTTTGCT-CTTGCTCTGTAC-TC-TAACA----CTT-ATAAACTTTCC-ATATGGCAAAACAGATGAGAGTCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AACATT
i Kogia_breviceps.KogBre_flattened_line_192630            I 2 C 0
s Lasiurus_borealis.LasBor_scaffold_50988                     10838 129 +     29960 -CTCTTG-C-T-C-C------CATCTTGCT-CTTGCTCTGTAC-CC-TAACA----TTT-ATAAACCTTCC-ATATGGCCAAACAGATGAGCGACCCC-T------------------------TGGGT----ATGGCGTGTAAATACC-AA-C----------CGA-AA-------------TATCATAAGTGAT-AA--AGTGTT
i Lasiurus_borealis.LasBor_scaffold_50988                 n 131 I 878
s Lemur_catta.scaffold_24                                  15519371 129 -  30322482 TTCCT-T-T-T-C-C------CATTTTGCT-CTTGCTCTCTAT-GC-TAACA----TTT-GTAAACTTTCA-ATCTGGCAAAGTGGATGAGGATCTCT-T------------------------TGGGT----ATATCTTGTAAATATC-AA-A----------TAG-AA-------------TATTATAAGTGAT-AA--AATGTC
i Lemur_catta.scaffold_24                                 C 0 C 0
s Lepilemur_ankaranensis.k141_596936                           5881 129 -     23766 TTTCT-T-C-T-C-C------CATTTTCCT-CTTGCTCTCTAT-GC-TAACA----TTT-GTAAATTTTCC-ATCTGGCAAAGTGGATGAGGATCTCT-T------------------------TGGGT----ATATCTTGTAAATATT-GA-A----------TAG-GA-------------TATTATAAGTGAT-AA--AACGTC
i Lepilemur_ankaranensis.k141_596936                      C 0 C 0
s Lepilemur_dorsalis.k141_577674                              23844 129 +     45836 TTTCT-T-C-T-C-C------CATTTTCCT-CTTGCTCTCTAT-GC-TAACA----TTT-GTAAATTTTCC-ATCTGGCAAAGTGGATGAGGATCTCT-T------------------------TGGGT----ATATCTTGTAAATATT-GA-A----------TAG-GA-------------TATTATAAGTGAT-AA--AACGTC
i Lepilemur_dorsalis.k141_577674                          C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                          30734 129 -     32627 TTTCT-T-C-T-C-C------CATTTTCCT-CTTGCTCTCTAC-GC-TAACA----TTT-GTAAATTTTCC-ATCTGGCAAAGTGGATGAGGATCTCT-T------------------------TGGGT----ATATCTTGTAAATATT-GA-A----------TAG-GA-------------TATTATAAGTGAT-AA--AACGTC
i Lepilemur_ruficaudatus.k141_420445                      C 0 C 0
s Lepilemur_septentrionalis.k141_185316                       21934 129 +     54090 TTTCT-T-C-T-C-C------CATTTTCCT-CTTGCTCTCTAT-GC-TAACA----TTT-GTAAATTTTCC-ATCTGGCAAAGTGGATGAGGATCTCT-T------------------------TGGGT----ATATCTTGTAAATATT-GA-A----------TAG-GA-------------TATTATAAGTGAT-AA--AACGTC
i Lepilemur_septentrionalis.k141_185316                   C 0 C 0
s Leptonychotes_weddellii.APMU01165359.1                       1159 129 -      1663 -ttcttt-t-t-c-c------cactttGCT-CTTGCTGTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGACTCCCT-T------------------------TGGGC----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AATGTT
i Leptonychotes_weddellii.APMU01165359.1                  I 2 C 0
s Lepus_americanus.LepAme_scaffold_107385                      2800 131 -     14121 CTTCTTT-T-G-T-A------CATTTTGCT-CTTGCTCCTAAC-TC-TAACA----TTT-ATAAACTTCCC-ATATGGCAAAACAGCTAAGGATCCCT-T------------------------GGGGT----GTATCTTATAAATACC-AA-A----------TGA-AA-------------TACCATAAGTGAT-AAA-AATGTT
i Lepus_americanus.LepAme_scaffold_107385                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                              266676 129 -    662738 -TTCTTG-T-T-C-C------CATTTTGTT-CTTGCTCTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAACAGATGAGAGTCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AACATT
i Lipotes_vexillifer.KE559953.1                           I 2 C 0
s Lophocebus_aterrimus.ctg367                               1430632 133 +   1826925 TTTCTTT-A-C-T-C------CACTCTGCT-CCTGCTCATTCC-TC-TAATGGTTTGTT-ATAAGCTTTCC--TATACCAGAGCAGATGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAGGTGAT-AA--ACCCTT
i Lophocebus_aterrimus.ctg367                             C 0 C 0
s Loxodonta_africana.GL010049.1                             4213669 131 -  43346337 attcttttt-t-t-c------cattttgct-ctTGCTCTCTAC-TC-TAACA----TTT-GTAAACTTTCC-ATATGGCAAAACAGATGAGGGTCCCT-T------------------------TGGGT----ACATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAG-AA--AATGTT
i Loxodonta_africana.GL010049.1                           C 0 I 1
s Lycaon_pictus.CM007581.1                                 17950875 130 -  59628241 -ttcttt-c-tcc-c------cactctTCT-CTTGCTCTATAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGGTCCCT-T------------------------TGGGC----ATATCATGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AATGTT
i Lycaon_pictus.CM007581.1                                I 2 C 0
s Macaca_arctoides.k141_2326796                                 842 133 +     40492 TTTCTTT-A-C-T-C------CACTCTGCT-CCTGCTCATTCC-TC-TAATGGTTTGTT-ATAAGCTTTCC--TATACCAGAGCAGGTGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAGGTGAT-AA--ACCCTT
i Macaca_arctoides.k141_2326796                           C 0 C 0
s Macaca_assamensis.Contig5                                59670102 133 +  60120075 TTTCTTT-A-C-T-C------CACTCTGCT-CCTGCTCATTCC-TC-TAATGGTTTGTT-ATAAGCTTTCC--TATACCAGAGCAGGTGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAGGTGAT-AA--ACCCTT
i Macaca_assamensis.Contig5                               C 0 C 0
s Macaca_cyclopis.k119_18836                                   6600 133 -     26193 TTTCTTT-A-C-T-C------CACTCTGCT-CCTGCTCATTCC-TC-TAATGGTTTGTT-ATAAGCTTTCC--TATACCAGAGCAGGTGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAGGTGAT-AA--ACCCTT
i Macaca_cyclopis.k119_18836                              C 0 C 0
s Macaca_fascicularis.k141_814140                             74390 134 -    114318 TTTCTTT-A-C-T-C------CACTCTGCT-CCTGCTCATTCC-TC-TAATGGTTTGTT-ATAAGCTTTCC--TATACCAGAGCAGGTGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAGGTGATTAA--ACCCTT
i Macaca_fascicularis.k141_814140                         C 0 C 0
s Macaca_fuscata.k119_255327                                    113 133 -     23192 TTTCTTT-A-C-T-C------CACTCTGCT-CCTGCTCATTCC-TC-TAATGGTTTGTT-ATAAGCTTTCC--TATACCAGAGCAGGTGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAGGTGAT-AA--ACCCTT
i Macaca_fuscata.k119_255327                              C 0 C 0
s Macaca_leonina.k141_3550399                                  9562 133 -     29190 TTTCTTT-A-C-T-C------CACTCTGCT-CCTGCTCATTCC-TC-TAATGGTTTGTT-ATAAGCTTTCC--TATACCAGAGCAGGTGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------CAG-AA-------------TATGACAGGTGAT-AA--ACCCTT
i Macaca_leonina.k141_3550399                             C 0 C 0
s Macaca_maura.k141_2733130                                   18133 133 +     37952 TTTCTTT-A-C-T-C------CACTCTGCT-CCTGCTCATTCC-TC-TAATGGTTTGTT-ATAAGCTTTCC--TATACCAGAGCAGGTGAGGATCCCT-T------------------------TGGTC----ATATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAGGTGAT-AA--ACCCTT
i Macaca_maura.k141_2733130                               C 0 C 0
s Macaca_mulatta.NC_041758.1                              186833221 133 + 187317192 TTTCTTT-A-C-T-C------CACTctgct-cctgctcattcc-tc-taaTGGTTTGTC-ATAAGCTTTCC--TATACCAGAGCAGGTGAGGATTCCT-T------------------------TGGTC----ATATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAGGTGAT-AA--ACCCTT
i Macaca_mulatta.NC_041758.1                              C 0 C 0
s Macaca_nemestrina.KQ007038.1                             25451779 133 -  25927173 TTTCTTT-A-C-T-C------CACtctgct-cctgctcattcc-tc-taaTGGTTTGTT-ATAAGCTTTCC--TATACCAGAGCAGGTGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAGGTGAT-AA--ACCCTT
i Macaca_nemestrina.KQ007038.1                            C 0 C 0
s Macaca_nigra.k141_1655396                                   73982 133 +     89720 TTTCTTT-A-C-T-C------CACTCTGCT-CCTGCTCATTCC-TC-TAATGGTTTGTT-ATAAGCTTTCC--TATACCAGAGCAGGTGAGGATCCCT-T------------------------TGGTC----ATATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAGGTGAT-AA--ACCCTT
i Macaca_nigra.k141_1655396                               C 0 C 0
s Macaca_radiata.k141_3680011                                   979 133 +     20474 TTTCTTT-A-C-T-C------CACTCTGCT-CCTGCTCATTCC-TC-TAATGGTTTGTT-ATAAGCTTTCC--TATACCAGAGCAGGTGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAGGTGAT-AA--ACCCTT
i Macaca_radiata.k141_3680011                             C 0 C 0
s Macaca_siberu.k141_635500                                     780 133 -     14993 TTTCTTT-A-C-T-C------CACTCTGCT-CCTGCTCATTCC-TC-TAATGGTTTGTT-ATAAGCTTTCC--TATACCAGAGCAGGTGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAGGTGAT-AA--ACCCTT
i Macaca_siberu.k141_635500                               C 0 C 0
s Macaca_silenus.Contig273                                   323412 133 -    668171 TTTCTTT-A-C-T-C------CACTCTGCT-CCTGCTCATTCC-TC-TAATGGTTTGTT-ATAAGCTTTCC--TATACCAGAGCAGGTGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------CAG-AA-------------TATGACAGGTGAT-AA--ACCCTT
i Macaca_silenus.Contig273                                C 0 C 0
s Macaca_thibetana.k99_7456                                   14922 133 -     15935 TTTCTTT-A-C-T-C------CACTCTGCT-CCTGCTCATTCC-TC-TAATGGTTTGTT-ATAAGCTTTCC--TATACCAGAGCAGGTGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAGGTGAT-AA--ACCCTT
i Macaca_thibetana.k99_7456                               C 0 C 0
s Macaca_tonkeana.k141_1498238                                19718 133 -     45290 TTTCTTT-A-C-T-C------CACTCTGCT-CCTGCTCATTCC-TC-TAATGGTTTGTT-ATAAGCTTTCC--TATACCAGAGCAGGTGAGGATCCCT-T------------------------TGGTC----ATATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAGGTGAT-AA--ACCCTT
i Macaca_tonkeana.k141_1498238                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                  86780 129 +     94391 -TTCTTA-T-T-C-C------CATTTTGCT-CTTGCTCTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCATATGAGCGTCCCT-T------------------------TGGGT----ATATCATATAAACACC-AA-G----------TGA-AA-------------TATCATAAGTGAT-AA--AACATT
i Macroglossus_sobrinus.MacSob_scaffold_8222              I 2 C 0
s Mandrillus_leucophaeus.scaffold280                       23931254 133 -  24302211 TTTCTTT-A-C-T-C------CACTCTGCT-CCTGCTCATTCC-TC-TAATGGTTTGGT-ATAAGCTTTCC--TATACCAGAGCAGGTGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAGGTGAT-AA--ACCCTT
i Mandrillus_leucophaeus.scaffold280                      C 0 C 0
s Mandrillus_sphinx.Contig270                                345431 133 +    752769 TTTCTTT-A-C-T-C------CACTCTGCT-CCTGCTCATTCC-TC-TAATGGTTTGGT-ATAAGCTTTCC--TATACCAGAGCAGGTGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAGGTGAT-AA--ACCCTT
i Mandrillus_sphinx.Contig270                             C 0 C 0
s Manis_javanica.JSZB01003497.1                               14751 128 +    737560 -ttcttt-t-t-c-c------catttttct-cttgctCCGCTCTTC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGATCCCT-T------------------------AGGGC----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCAT--GTGAT-AA--AATGTT
i Manis_javanica.JSZB01003497.1                           C 0 C 0
s Manis_pentadactyla.KN006162.1                               46145 128 -    317179 -ttcttt-t-t-c-c------catttttct-cttgctCCGCTCTTC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGGTCCCT-T------------------------AGGGC----ATATCTTATAAATACC-AA-A----------TGA-AA-------------TATCAT--GTGAT-AA--AATGTT
i Manis_pentadactyla.KN006162.1                           C 0 C 0
s Marmota_marmota.CZRN01000018.1                           33096555 130 -  40650429 tttcctt-t-t-c-a------caTTTTGCT-CTGACTCTCCAC-TC-TAACA----TTT-GCAAACTTTCC-ATATGGCAAAGCAGATGAGGATCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATACATGAT-AA--AATGTT
i Marmota_marmota.CZRN01000018.1                          C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                          6048 129 -    207569 -TTCTTG-C-C-C-C------CATGTTGCT-CTTGCTCTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATACGGCAACGCAGAGGATGGTCCTT-T------------------------TGGGT----GTATCATGTAAATACC-AA-A----------TGA-AA-------------TATCCTAAGTGAT-AA--AGTGTT
i Megaderma_lyra.MegLyr_scaffold_4542                     I 2 C 0
s Mellivora_capensis.MelCap_flattened_line_69365               5232 128 +     13704 -TTCTTT-T-T-C-C------CACTTTGCT-CTTGCACTGCAT-TC-TAACA----TTT-ATAAACTTTCC-ATACGGTAAAGCCGATGAGGGTCCCT-T------------------------TGGGC----AAACCTTGTAAATACC-AA-A----------TGA-AA-------------TATAATAAGTGAT-A---AATGTT
i Mellivora_capensis.MelCap_flattened_line_69365          I 2 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                  27364 129 +    140813 CTTTTTTCC-T-T-A------CATTTTGTT-CTTGGTATCTAC-TC-TAACA----TTT-ATAAAATTTCC-ATATAGCAAAGCAGATGAGGACCCCA-T------------------------TGGGT----ATATTATGTAAATACC-AA-A----------TGA-AA-------------TA---TATGTCAT-TTA-AATGTG
i Meriones_unguiculatus.MerUng_scaffold_7390              C 0 C 0
s Mesocricetus_auratus.KB708134.1                          12177241 131 -  29670104 cttcttt-c-t-t-t------tattttgat-cttGGTATCTAC-TC-TAGTA----ATT-ATGAACTTTCC-ATGTGGCAAAGTAAATGAGAATCCTA-T------------------------TGGGT----ATGTCATGTAAATAGC-AA-A----------TGA-AA-------------TATCATAAGTGAC-AAA-AATGTG
i Mesocricetus_auratus.KB708134.1                         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                     2263 129 +     10310 -TTCTTG-T-T-C-C------CATTTTGCT-CTTGCTCTGTAC-TC-TAACA----CTT-ATAAACTTTCC-ATATGGCAAAACAGATGAGAGTCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCGTAAGTGAT-AA--AACATT
i Mesoplodon_bidens.MesBid_scaffold_108144                I 2 C 0
s Microcebus_murinus.CM007674.1                            18282102 129 -  93316391 ttcct-t-t-t-c-c------cattttgct-cttgctctctcC-TC-TAACA----TTT-GTAAACTTTCC-ATCTGGCAAAGTAGATGAGGATCTCT-T------------------------TGGGT----ATATCttataaatatc-aa-a----------tag-aa-------------TATTATAAGTGAT-AA--AATGTC
i Microcebus_murinus.CM007674.1                           C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                     14705  89 -    145209 ---------------------------------------------------------TT-ATAAAATTTCC-ACATGATAAAACAGATGAGAGGTTCT-T------------------------TGGGT----ATATCTTGTAAATACC-A-AA----------TGA-AA-------------TATCATAAGGGAC-AA--AGCAT-
i Microgale_talazaci.MicTal_scaffold_6613                 I 21 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                 12647 129 -     19307 -TTCTTG-T-T-C-C------CATTTTGCT-CATGCTCTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAACAGATGAGCAGCCCA-T------------------------TGGGT----ACAGCCTGTAAATACC-AA-G----------TGA-AA-------------TATCATAAGTGAT-AA--AGCGTT
i Micronycteris_hirsuta.MicHir_scaffold_52381             I 2 C 0
s Microtus_ochrogaster.CM001695.1                          11255604 127 -  27267610 CTTCTTT-C-T-T-A------CGTTTTGCT-CTTGGTAGCTAC-gt-taaca----ttt-ttaaactttcc-atGTGGCAAAGTAAATAAGAACCCCA-C------------------------TGGGT----ATATCATAtaaacagc-aa-a----------taa-aa-------------ta---tatatgac-a--aaatGTG
i Microtus_ochrogaster.CM001695.1                         C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                     1848077 129 +   8254450 -ctcttc-t-t-c-c------catttTGCT-CTTGCTCTGGAC-CC-TAACA----TTT-ATAATCTTTCC-ATATGGCAAAACAGATGAGCGACCCC-T------------------------TGGGT----ATATGGTGTAAATACC-AA-C----------TGA-AA-------------TATCATAAGTTAT-AA--AGCGTT
i Miniopterus_natalensis.LDJU01000034.1                   I 2 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080              31946 129 +     64694 -CTCTCC-T-T-C-C------CATTTTGCT-CTTGCTCTGGAC-CC-TAACA----TTT-ATAATCTTTCC-ATATGGCAAAACAGATGAGCGACCCC-T------------------------TGGGT----ATATGGTGTAAATACC-AA-C----------TGA-AA-------------TATCATAAGTTAT-AA--AGCGTT
i Miniopterus_schreibersii.MinSch_scaffold_18080          I 2 C 0
s Miopithecus_ogouensis.k141_534055                            2992 129 -     28506 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG----GTT-ATAAGCTTTCC--TATACCAAAGCAGATGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAGGAGAT-AA--ACCCTT
i Miopithecus_ogouensis.k141_534055                       C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144         61410 129 -     63350 -TTCTTT-T-T-C-C------CACTTTGCT-CTTGCTGTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGACTCCCT-T------------------------TGGGC----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AATGTT
i Mirounga_angustirostris.MirAng_flattened_line_22144     I 2 C 0
s Mirza_zaza.k141_1511790                                     38104 129 +     38511 TTCCT-T-T-T-C-C------CATTTTGCT-CTTGCTCTCTCC-TC-TAACA----TTT-GTAAACTTTCC-ATCTGGCAAAGTGGATGAGGATCTCT-T------------------------TGGGT----ATATCTTATAAATATC-AA-A----------TAG-AA-------------TATTATAAGTGAT-AA--AATGTC
i Mirza_zaza.k141_1511790                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                     25768 129 -    437263 -TTCTTG-T-T-C-C------CATTTTGTT-CTTGCTCTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAACAGATGAGAGTCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AACATT
i Monodon_monoceros.MonMon_M_scaffold_103                 I 2 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                  137037 129 -    366855 -TTCTTG-T-T-C-C------CATTGTGCG-CTTGCTCTGCAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAACAGATGAGCAGCCCA-T------------------------TGGGT----ATAGCATGAAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AGCGTT
i Mormoops_blainvillei.MorMeg_scaffold_1417               I 2 C 0
s Moschus_moschiferus.MosMos_scaffold_61429                   26712 129 -     27816 -TTCCTG-T-T-C-C------CATTTTGCT-TTTGCTCTGTGC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGATCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AACGTT
i Moschus_moschiferus.MosMos_scaffold_61429               I 2 C 0
s Mungos_mungo.MunMun_flattened_line_23663                    23537 129 +     37127 -TTCTTT-T-T-C-C------CACTTTGCT-CTGGCTCTGTAC-TC-TCACG----TTT-ATAAACTTTCC-ATATGGCAAAGCAGAAGAGAGTCCCT-C------------------------TGGGC----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AATGTT
i Mungos_mungo.MunMun_flattened_line_23663                I 2 C 0
s Murina_feae.MurFea_scaffold_85699                            4138 129 +     14753 -TTCTTG-C-T-C-C------CATTTTGCT-CTTGCTCTGTAT-CC-TAACA----TTT-ATAAACCTTCC-ATATGGCCAAGCAGATGAACGACCCC-T------------------------TGGGT----ATAGTGTGTAAATATC-AA-A----------TAA-AA-------------TATCATAAGTGGT-AA--AGTGTT
i Murina_feae.MurFea_scaffold_85699                       I 2 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313               1495 131 +     14296 CTTCCTT-T-T-T-A------CATTTTGTT-CTTGCTCTCAAC-TG-TAACA----TTT-GTACACTTTCC-ATATGGCAAAGCACATGAGGATCCCT-T------------------------TGGGT----ATAGCTTGTAAATACC-AA-A----------TGTTAA-------------TATCATACATGAT-AA--AATGTT
i Muscardinus_avellanarius.MusAve_scaffold_82313          C 0 C 0
s Mustela_putorius.JH418006.1                                296876 129 -  14710649 -tccttt-t-t-c-c------cactTTGCT-CTTGCACTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGGTCCCT-T------------------------TGGGC----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AATGTT
i Mustela_putorius.JH418006.1                             I 2 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                      70329 131 -     80779 CTACCT-TTTT-C-A------CAGTTTGCT-CTGGCTCTGTAC-TG-TAACA----TTT-ATAAACTTTCC-ATATGGTAAAGCAGATGAGGATCCCA-T------------------------TGAGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCACACATGGT-AA--AATGTT
i Myocastor_coypus.MyoCoy_scaffold_10123                  C 0 C 0
s Myotis_brandtii.KE162005.1                                 277244 129 -  10118263 -TTCTTG-C-T-C-C------CATTTTGCT-CTTGCTCTGTAT-CC-TAACA----TTT-CTAAACCTTCC-ATATGGCCAAGCAGATGAGCGACCCC-T------------------------TGGGT----ATAGCGTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AGCGTT
i Myotis_brandtii.KE162005.1                              I 2 C 0
s Myotis_davidii.KB100139.1                                 1584816 129 -   6019432 -TTCTTG-C-T-C-C------CATTTTGTT-CTTGCTCTGTAT-CC-TAACA----TTT-CTAAACCTTCC-ATATGGCCAAGCAGATGAGCGACCCC-T------------------------TGGGT----ATAGCGTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AGCGTT
i Myotis_davidii.KB100139.1                               I 2 C 0
s Myotis_lucifugus.GL429869.1                               3901033 129 -   4330536 -TTCTTG-C-T-C-C------CATTTTGCT-CTTGCTCTGTAT-CC-TACCA----TTT-CTAAACCTTCC-ATATGGCCAAGCAGATGAGCGACCCC-T------------------------TGGGT----ATAGCATGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AGCGTT
i Myotis_lucifugus.GL429869.1                             I 2 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                         31583 129 +     33610 -TTCTTG-C-T-C-C------CATTTTGCT-CTTGCTCTGTAT-CC-TAACA----TTT-CTAAACCTTCC-ATATGGCCAAGCAGATGAGCGACCCC-T------------------------TGGGT----ATAGCGTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AGCGTT
i Myotis_myotis.MyoMyo_scaffold_28916                     I 2 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081               185298 131 +    196477 CCTTCTT-T-T-T-C------CATTTTTCT-CTGGCTTTCTAC-TC-TAACA----TTT-ATAAACTTTCC-GTATGGCAAAGCAGATGAGGGATCCTTT------------------------TGGGT----ATATCGTGTAAATATC-AA-G----------TGA-AA-------------GATCAGAAGTGAT-AA--AAAGTT
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081            I 3 C 0
s Nannospalax_galili.KL204047.1                             2024701 122 -   3037898 cttcttt-c-t-t-c------cattttact-CTTGGTCT------C-TAACA----TTT-ATAAACTTTCC-ATATGGCA---CAGATGAGGATGCCT-T------------------------TGGGT----AGATCATGTAAATACC-AA-A----------TGA-AA-------------TATCATACGTGAT-AA--AATGTT
i Nannospalax_galili.KL204047.1                           C 0 C 0
s Nasalis_larvatus.k141_413338                                 9007 124 +     21681 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG-----GT-ATCAGCTTTCC--TATACCAGAGCACATGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------AATGACAAGTGAT-AA--AC----
i Nasalis_larvatus.k141_413338                            C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                 20298401 129 +  31847680 -ttcttt-t-t-c-c------cactttGCT-CTTGCTGTGTAT-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGACTCCTT-T------------------------TGGGC----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AATGTT
i Neomonachus_schauinslandi.NINY01007730.1                I 2 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                    5864724 129 +   7148211 -ttcttg-t-t-C-C------CATTTTGTT-CTTGCTCTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAACAGATGAGAGTCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCAGAAGTGAT-AA--AACATT
i Neophocaena_asiaeorientalis.KZ687982.1                  I 2 C 0
s Noctilio_leporinus.NocLep_scaffold_251                     755641  97 +    783361 ---------------------------------------------C-TAACA----TTT-ATAAACTTTCC-ATATGGCAGAACAGATAAGCGGCCCT-T------------------------TGGGA----ATAACATGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AGCGTT
i Noctilio_leporinus.NocLep_scaffold_251                  I 21 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                9145071 130 -   9404916 -ttcttt-t-tcc-c------cactctTCT-CTTGCTCTATAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGGTCCCT-T------------------------TGGGC----ATATCCTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AATGTT
i Nyctereutes_procyonoides.CAJHUB010000658.1              I 2 C 0
s Nycticebus_bengalensis.LG01                             102568963 129 - 196305487 CTTCTTT-T-T-T-C------CACTTTGCT-CTTGCTCCATAC-TC-TAACA----TTT-ATAAACTTTCC-ATCTGGCTAAGTCAAAGATGATCTCT-T------------------------TAGGT----ATATCTTATAAATATA-GA-A----------TAG-AA-------------TATTATAAGTTTA-AA--AA-GTC
i Nycticebus_bengalensis.LG01                             C 0 C 0
s Nycticebus_coucang.k141_7325916                              3742 129 -      4362 CTTCTTT-T-T-T-C------CACTTTGCT-CTTGCTCCATAC-TC-TAACA----TTT-ATAAACTTTCC-ATCTGGCTAAGTCAAAGATGATCTCT-T------------------------TAGGT----ATATCTTATAAATATA-GA-A----------TAG-AA-------------TATTATAAGTTTA-AA--AA-GTC
i Nycticebus_coucang.k141_7325916                         C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        105732994 129 + 199412804 CTTCTTT-T-T-T-C------CACTTTGCT-CTTGCTCTATAC-TC-TAACA----TTT-ATAAACTTTCC-ATCTGGCTAAGTCAAAGATGATCTCT-T------------------------TAGGT----ATATCTTATAAATATA-GA-A----------TAG-AA-------------TATTATAAGTTTA-AA--AA-GTC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        C 0 C 0
s Ochotona_princeps.JH802162.1                              1354910 131 +   3988456 CTTCTTT-T-G-T-G------CATTTTGCT-CTTGCTCCCAAC-TC-TAACA----TTT-ATATACTTTCC-ATATGGCAAAACAGATGAGGATGCCT-T------------------------GGGGT----GTATCTTGTAAATATC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AAA-AACGTT
i Ochotona_princeps.JH802162.1                            C 0 C 0
s Octodon_degus.JH651603.1                                   745626 130 +  11899542 cttctt-tt-t-t-g------cAGTTTGCT-CTTGCTCTGTAC-TG-TAACT----TTT-ATGAACTTTCC-ATATGGCCAAGCAGATGAGGATCCCG-C------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCACACGTGGG-AA--AATGTT
i Octodon_degus.JH651603.1                                C 0 C 0
s Odobenus_rosmarus.KB229312.1                               499928 129 -   2017862 -tttttt-t-t-c-c------cactttgct-CTTGCTGTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGGTCTCT-T------------------------TGGGC----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AATGTT
i Odobenus_rosmarus.KB229312.1                            I 2 C 0
s Odocoileus_virginianus.KZ100018.1                          143949 129 +    630418 -TTCCTG-T-T-C-C------CATTTTGCT-TTTGCTCTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGATCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AACGTT
i Odocoileus_virginianus.KZ100018.1                       I 2 C 0
s Okapia_johnstoni.LVCL01S0005463.1                           75994 129 -    150152 -TTCCTG-T-T-C-C------CATTTTGCT-TTTGCTCTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGATCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AACGTT
i Okapia_johnstoni.LVCL01S0005463.1                       I 2 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                    15911 132 +     28053 CTTCTTT-C-T-T-A------CATTTTGCT-CTTGGTACCTAC-TC-TAACA----TTT-ATAAACTTTCC-ATGTGGCAAAGTAAATGAGAATCCCA-T------------------------TGGGT----ATATCATATAAACATC-AA-A----------TAA-AA-------------TACCATATGTGAT-AAAAAATGTG
i Ondatra_zibethicus.OndZib_scaffold_46174                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                     73954 116 +    102263 C-TCTTT-C-T-T-A------TAGTTTTCT-CTTTGTATATAT-TC-TGACA----TTT-ACAAACTTTCC-ATGTGGCAAAGTAACTAAGAACCCCA-T------------------------TGGGT----GTATCATGTAAATAGC-AA-A----------TGA-AA-------------TATAATAA----------------
i Onychomys_torridus.OnyTor_scaffold_2986                 C 0 I 3
s Orcinus_orca.KB316932.1                                   2780639 129 -  10937097 -TTCTTG-T-T-C-C------CATTTTGTT-CTTGCTCTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAACAGATGAGAGTCCCT-T------------------------TGTGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AACATT
i Orcinus_orca.KB316932.1                                 I 2 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387                6038 129 -     18566 CCACTTT-T-T-T-C------CATTTTTTT-CTTGTTCTCTAC-TA-TAACA----TCT-ATAAACTTTCC-ATATGGCAAAACAGATGAGGGTCCCT-T------------------------TGGGT----GTATCTTGTAAATACC-A--A----------TGA-AA-------------TATCATAAGTGAT-AA--AACATT
i Orycteropus_afer.OryAfe_flattened_line_144387           C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                         67143653 131 + 174332312 CCTTGTT-T-G-T-A------CATTTTGCT-CTTGCTCCTAAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAACAGCTGAGGATCCCT-T------------------------GGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AAA-AATGTT
i Oryctolagus_cuniculus.CM000791.1                        C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        457831 130 -    559221 -ttcttt-t-tcc-c------cactcTTCT-CTTGCTCTATAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGGTCCCT-T------------------------TGGGC----ATATCATGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AATGTT
i Otocyon_megalotis.JAEUCK010005147.1                     I 2 C 0
s Ovis_aries.CM001607.2                                    17584307 129 +  44047080 -TTCCTG-T-T-C-C------CATTTTGCT-TTTGCTCTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGATCCCT-T------------------------TGGGT----ATATCTTATAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AATGTT
i Ovis_aries.CM001607.2                                   I 2 C 0
s Ovis_canadensis.OviCan_scaffold_2572                       172724 129 -    191736 -TTCCTG-T-T-C-C------CATTTTGCT-TTTGCTCTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGATCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AATGTT
i Ovis_canadensis.OviCan_scaffold_2572                    I 2 C 0
s Pan_paniscus.KQ411613.1                                     35385 130 +     80009 tttcttt-a-c-t-c------CATTctgct-cctgctcattcc-tc-taaTG----TGT-ATAAACTTCCCA-TATACCATAGCAGATGAGGATCCCT-T------------------------TGGTT----GTATCTTGTCAATACC-AA-A----------CAG-AA-------------TATGACAAGTGAT-AA--ACCCTT
i Pan_paniscus.KQ411613.1                                 C 0 C 0
s Pan_troglodytes.CM009242.2                              189136335 130 + 189151597 TTTCTTT-A-C-T-C------CATtctgct-cctgctcattcc-tc-taaTG----TGT-ATAAACTTCCCA-TATACCATAGCAGATGAGGATCCCT-T------------------------TGGTT----GTATCTTGTCAATACC-AA-A----------CAG-AA-------------TATGACAAGTGAT-AA--ACCCTT
i Pan_troglodytes.CM009242.2                              C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   139811 130 +    230217 -TTCTTT-T-T-C-C------CACTTTGCTTCTGGCTCTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGAGTCCCT-T------------------------GGGGC----ATATCTTGTAAATACA-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AATGTT
i Panthera_onca.PanOnc_flattened_line_3271                I 2 C 0
s Panthera_pardus.KV860321.1                                 251340 130 +  18783137 -ttcttt-t-t-c-c------cactttGCTTCTGGCTCTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGAGTCCCT-T------------------------GGGGC----ATATCttgtaaataca-aa-a----------tga-aa-------------tatcatAAGTGAT-AA--AATGTT
i Panthera_pardus.KV860321.1                              I 2 C 0
s Panthera_tigris.KE722367.1                                4709781 130 -   8748460 -ttcttt-t-t-c-c------cactttGCTTCTGGCTCTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGAGTCCCT-T------------------------GGGGC----ATATCttgtaaataca-aa-a----------tga-aa-------------tatcatAAGTGAT-AA--AATGTT
i Panthera_tigris.KE722367.1                              I 2 C 0
s Pantholops_hodgsonii.KE114653.1                           1263657 129 -   2937107 -TTCCTG-T-T-C-C------CATTTTGCT-TTTGCTCTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGATCCCT-T------------------------TGGGT----ATATCTTTTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AATGTT
i Pantholops_hodgsonii.KE114653.1                         I 2 C 0
s Papio_anubis.CM001495.2                                 183436573 133 + 183742232 TTTCTTT-A-C-T-C------CACTctgct-cctgctcattcc-tc-taaTGGTTTGTT-ATAAGCTTTCC--TATACCAGAGCAGGTGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAGGTGAT-AA--ACCCTT
i Papio_anubis.CM001495.2                                 C 0 C 0
s Papio_cynocephalus.k141_4307930                               635 133 +     20448 TTTCTTT-A-C-T-C------CACTCTGCT-CCTGCTCATTCC-TC-TAATGGTTTGTT-ATAAGCTTTCC--TATACCAGAGCAGGTGAGGATCCCT-T------------------------TGGTC----ATATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAGGTGAT-AA--ACCCTT
i Papio_cynocephalus.k141_4307930                         C 0 C 0
s Papio_hamadryas.Contig39                                 20557257 133 +  20919399 TTTCTTT-A-C-T-C------CACTCTGCT-CCTGCTCATTCC-TC-TAATGGTTTGTT-ATAAGCTTTCC--TATACCAGAGCAGGTGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAGGTGAT-AA--ACCCTT
i Papio_hamadryas.Contig39                                C 0 C 0
s Papio_kindae.k141_4051466                                     835 133 -      1598 TTTCTTT-A-C-T-C------CACTCTGCT-CCTGCTCATTCC-TC-TAATGGTTTGTT-ATAAGCTTTCC--TATACCAGAGCAGGTGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAGGTGAT-AA--ACCCTT
i Papio_kindae.k141_4051466                               C 0 C 0
s Papio_papio.k141_802527                                      2667 133 +     27711 TTTCTTT-A-C-T-C------CACTCTGCT-CCTGCTCATTCC-TC-TAATGGTTTGTT-ATAAGCTTTCC--TATACCAGAGCAGGTGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAGGTGAT-AA--ACCCTT
i Papio_papio.k141_802527                                 C 0 C 0
s Papio_ursinus.k141_3428135                                   2656 133 +      9205 TTTCTTT-A-C-T-C------CACTCTGCT-CCTGCTCATTCC-TC-TAATGGTTTGTT-ATAAGCTTTCC--TATACCAGAGCAGGTGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAGGTGAT-AA--ACCCTT
i Papio_ursinus.k141_3428135                              C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_163540       608 130 +      1892 -TTCTTT-T-T-CCC------CACTTTGCT-CTGGCTCTGTAC-TC-TAACG----TTT-ATAAACTTTCC-ATATGGCAAGGCAGATGAGGGTCCCT-T------------------------TGGGC----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AATGTT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_163540 n 128 I 43
s Perognathus_longimembris.PerPac_flattened_line_34437        24398 133 +     32600 CTTCTTT-T-G-C-A------TATTTTACT-CTG-TTCTCTAC-TC-ACCCA----ATT-ATGAACTTTCC-ATATGGCAAAGCAGATGAAGATCCAT-T------------------------TGGGTATGTATATCTTATCAATACC-AA-A----------TGA-GA-------------TAACATATGTGAT-AA--AACATT
i Perognathus_longimembris.PerPac_flattened_line_34437    C 0 C 0
s Peromyscus_maniculatus.KI615324.1                        18186765 131 -  18517816 CTTCatt-c-t-t-a------catttttct-cttggtATTTAC-TC-TAACA----TTT-ATAAACTTCCC-ATGTGGCAAAGTAACTAAGAATCCCA-T------------------------TGGGT----GTATCGtgtaaatagt-aa-a----------taa-aa-------------tattatatgtgaT-AAA-AATGTG
i Peromyscus_maniculatus.KI615324.1                       C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                      25113 130 -     29689 CTTCTT-TT-T-T-A------GAGTTTGCT-CTTGCTCTGTAC-TG-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGATCCCG-T------------------------TGGGT----ATATCTTATAAATACC-AA-A----------TGA-AA-------------TATCACACGTGGT-AA--AATGTT
i Petromus_typicus.PetTyp_scaffold_42190                  C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159                7686 129 +     63832 -TTCTTG-T-T-C-C------CATTTTGTT-CTTGCTCTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAACAGATGAGAGTCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCAGAAGTGAT-AA--AACATT
i Phocoena_phocoena.PhoPho_flattened_line_24159           I 2 C 0
s Piliocolobus_badius.k141_1234363                            37521 127 +     62158 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG-----GT-ATCAGCTTTCC--TATACCAGAGCACATGAGGATCCCT-T------------------------TGGTT----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATAACA-GTGAT-AA--ACCCTT
i Piliocolobus_badius.k141_1234363                        C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         32248 129 +     89929 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG-----GTTATAAGCTTTCC--TATACCAGAGCACATGAGGATCCCT-T------------------------TGGTC----ATATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAAGTGAT-AA--ACCCTT
i Piliocolobus_gordonorum.k141_381342                     C 0 C 0
s Piliocolobus_kirkii.k141_448987                             33664 129 +     51399 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG-----GTTATAAGCTTTCC--TATACCAGAGCACATGAGGATCCCT-T------------------------TGGTC----ATATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAAGTGAT-AA--ACCCTT
i Piliocolobus_kirkii.k141_448987                         C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                 14289885 127 -  14605196 TTTCTTT-A-C-T-C------CATTctgct-cctgctcattcc-tc-taaTG-----GT-ATCAGCTTTCC--TATACCAGAGCACATGAGGATCCCT-T------------------------TGGTT----GTATCTTGTCAATACC-GA-A----------TAG-AA-------------TATAACA-GTGAT-AA--ACCCTT
i Piliocolobus_tephrosceles.PDMG02000141.1                C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_7723              78602 129 +     79650 -TTCTTG-C-T-C-C------CATTTTGCT-CTCGCTCTGTAT-CC-TACCG----TTT-ATAAACCCTCC-ATATGGCCAAGCAGATGAGCGACCCC-T------------------------TGGGT----ATAGTGTGTAAATACC-AA-G----------TGA-AA-------------TATCATAAGTGAT-AA--AGCATT
i Pipistrellus_pipistrellus.PipPip_scaffold_7723          I 2 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310            33398 129 +     35617 -TTCTTG-T-T-C-C------CATTTTGCT-CTTGCTCTGTAC-TC-TAACA----TTT-ATACACTTTCC-ATATGGCAAAACAGATGAGAGTCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AACATT
i Platanista_gangetica.PlaMin_flattened_line_32310        I 2 C 0
s Pongo_abelii.CM009266.2                                 189124424 130 + 189387572 TTTCTTT-A-C-T-C------CATTctgct-cctgctcattcc-tc-taaTG----TGT-ATAAACTTCCCA-TATACCAGAGAAGATGAGGATCCCT-T------------------------TGGTC----ATATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAAGTGAT-AA--GCCCTT
i Pongo_abelii.CM009266.2                                 C 0 C 0
s Pongo_pygmaeus.ctg66                                      9564267 130 +   9816681 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG----TGT-ATAAACTTCCCA-TATACCAGAGAAGATGAGGATCCCT-T------------------------TGGTC----ATATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAAGTGAT-AA--GCCCTT
i Pongo_pygmaeus.ctg66                                    C 0 C 0
s Presbytis_comata.k141_677006                                67167 124 -     81375 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG-----GT-ATCAGCTTTCC--TATACCAGAGCACATGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAAGTGAT-AA--AC----
i Presbytis_comata.k141_677006                            C 0 C 0
s Presbytis_mitrata.k141_2342859                               8987 124 +     10147 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG-----GT-ATCAGCTTTCC--TATACCAGAGCACATGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAAGTGAT-AA--AC----
i Presbytis_mitrata.k141_2342859                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                   9169 130 -     22811 CTTCTTT-T-T-T-C------CATTTTGTT-CTCGCTCTCTGC-TA-TAACG----TTC-ATAAACTTTCC-ATATGGCAAAACGGCTGAGGATCCCT-T------------------------TGGGT----ACATCTTGCAAATACC-AA-A----------TGA-AA-------------TATCACAAGTGAG-AA--AACATT
i Procavia_capensis.ProCapCap_scaffold_85530              C 0 C 0
s Prolemur_simus.MPIZ01000396.1                             2592020 129 -   4620579 ttcct-t-t-t-c-c------cattttgct-CTTGCTCTCTAT-AC-TAACA----TTT-GTAAACTTTCA-ATCTGGCAAAGTGGATGAGGATCTCT-T------------------------TGGGT----ATATCTTATAAATATC-AA-A----------TAG-AA-------------TATTATAAGTGAT-AA--AATGTC
i Prolemur_simus.MPIZ01000396.1                           C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                      985133 129 +   2598838 ttcct-t-t-t-c-c------cattttgct-cttgctctctcC-TC-TAACA----TTT-GTAAACTTTCC-ATCTGGCAAAGTGGATGAGGATCTCT-T------------------------TGGGT----ATATCTTGTAAATATC-AA-A----------TAG-AA-------------TATTATAAGTGAT-AA--AATGTC
i Propithecus_coquerelli.NW_012148875.1                   C 0 C 0
s Propithecus_coronatus.k141_347390                           23425 129 +     38485 TTCCT-T-T-T-C-C------CATTTTGCT-CTTGCTCTCTCC-TC-TAACA----TTT-GTAAACTTTCC-ATCTGGCAAAGTGGATGAGGATCTCT-T------------------------TGGGT----ATATCTTGTAAATATC-AA-A----------TAG-AA-------------TATTATAAGTGAT-AA--AATGTC
i Propithecus_coronatus.k141_347390                       C 0 C 0
s Propithecus_diadema.k141_1034595                            11512 129 -     12046 TTCCT-T-T-T-C-C------CATTTTGCT-CTTGCTCTCTCC-TC-TAACA----TTT-GTAAACTTTCC-ATCTGGCAAAGTGGATGAGGATCTCT-T------------------------TGGGT----ATATCTTGTAAATATC-AA-A----------TAG-AA-------------TATTATAAGTGAT-AA--AATGTC
i Propithecus_diadema.k141_1034595                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                           20953 129 +     35766 TTCCT-T-T-T-C-C------CATTTTGCT-CTTGCTCTCTCC-TC-TAACA----TTT-GTAAACTTTCC-ATCTGGCAAAGTGGATGAGGATCTCT-T------------------------TGGGT----ATATCTTGTAAATATC-AA-A----------TAG-AA-------------TATTATAAGTGAT-AA--AATGTC
i Propithecus_edwardsi.k141_1176054                       C 0 C 0
s Propithecus_perrieri.k141_1630595                           16200 129 +     17239 TTCCT-T-T-T-C-C------CATTTTGCT-CTTGCTCTCTCC-TC-TAACA----TTT-GTAAACTTTCC-ATCTGGCAAAGTGGATGAGGATCTCT-T------------------------TGGGT----ATACCTTGTAAATATC-AA-A----------TAG-AA-------------TATTATAAGTGAT-AA--AATGTC
i Propithecus_perrieri.k141_1630595                       C 0 C 0
s Propithecus_tattersalli.k141_790011                         22959 129 -     67325 TTCCT-T-T-T-C-C------CATTTTGCT-CTTGCTCTCTCC-TC-TAACA----TTT-GTAAACTTTCC-ATCTGGCAAAGTGGATGAGGATCTCT-T------------------------TGGGT----ATATCTTGTAAATATA-AA-A----------TAG-AA-------------TATTATAAGTGAT-AA--AATGTC
i Propithecus_tattersalli.k141_790011                     C 0 C 0
s Propithecus_verreauxi.k141_1019028                          12675 129 -     13615 TTCCT-T-T-T-C-C------CATTTTGCT-CTTGCTCTCTCC-TC-TAACA----TTT-GTAAACTTTCC-ATCTGGCAAAGTGGATGAGGATCTCT-T------------------------TGGGT----ATATCTTGTAAATATC-AA-A----------TAG-AA-------------TATTATAAGTGAT-AA--AATGTC
i Propithecus_verreauxi.k141_1019028                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                              5006 129 -     21651 cttttttcc-t-t-a------catTTTGTT-CTTGGTATCTAC-TC-TAACA----TTT-ATAAACTTCCC-ATGTAGCAAAGCAGATGAGGACCCCA-C------------------------TGGGT----ATATCATGTAAATACC-AA-A----------TGA-AA-------------TA---TATGTCAT-TTA-AATGTG
i Psammomys_obesus.NESX01036370.1                         C 0 C 0
s Pteronotus_parnellii.KE909381.1                             10419 129 -     21811 -TTCTTG-T-T-C-C------CATTTTGCT-CTCGTTCTATAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAACAGATGAGTGGCCCA-T------------------------TGGGA----GTAGCATGTAAATACC-AA-C----------TGA-AA-------------TATCATAAGTGAT-AA--AGTGTT
i Pteronotus_parnellii.KE909381.1                         I 2 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117          35897 129 +     42204 -TTCTTT-T-T-C-C------CACTTTGCT-CTTGCACTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGGTCCCT-T------------------------TGGGC----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AATGTT
i Pteronura_brasiliensis.PteBra_flattened_line_31117      I 2 C 0
s Pteropus_alecto.KB030862.1                               22972912 129 +  28871421 -TTCTTG-T-T-C-C------CATTTTGCT-CTTGCTCTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGGTCCCT-T------------------------TGGGT----ATATCATATAAACACC-AA-G----------TGA-AA-------------TATCATAAGTGAT-AA--AACGTT
i Pteropus_alecto.KB030862.1                              I 2 C 0
s Pteropus_vampyrus.KN525825.1                              1355904 129 +   4952924 -TTCTTG-T-T-C-C------CATTTTGCT-CTTGCTCTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGGTCCCT-T------------------------TGGGT----ATATCACATAAACACC-AA-G----------TGA-AA-------------TATCATAAGTGAT-AA--AACGTT
i Pteropus_vampyrus.KN525825.1                            I 2 C 0
s Puma_concolor.QAVW01001104.1                             20262318 130 -  38429054 -ttcttt-t-t-c-c------cactttgCTTCTGGCTCTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGAGTCCCT-T------------------------GGGGC----ATATCttgtaaataca-aa-a----------tga-aa-------------tatcataAGTGAT-AA--AATGTT
i Puma_concolor.QAVW01001104.1                            I 2 C 0
s Pygathrix_cinerea.k141_1153803                               8995 124 -     91421 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG-----GT-ATCAGCTTTCC--TATACCAGAGCACATGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAAGTGAT-AA--AT----
i Pygathrix_cinerea.k141_1153803                          C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  7603126 124 +   7812017 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG-----GT-ATCAGCTTTCC--TATACCAGAGCACATGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAAGTGAT-AA--AT----
i Pygathrix_nigripes_b.ctg100                                C 0 C 0
s Pygathrix_nigripes_a.k141_215492                               8963 124 -     72585 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG-----GT-ATCAGCTTTCC--TATACCAGAGCACATGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAAGTGAT-AA--AT----
i Pygathrix_nigripes_a.k141_215492                          C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                   4197 129 +     55207 -TTCCTG-T-T-C-C------CATTTTGCT-TTTGCTCTGTAC-TC-TAACA----TTT-TTAAACTTTCC-ATATGGCAAAGCAGATGAGGATCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AACATT
i Rangifer_tarandus.RanTarSib_scaffold_29737              I 2 C 0
s Rattus_norvegicus.chr8                                   20365144 122 + 133307652 cctcttt-a-t-t-a------tattttgtt-cttgGT-----C-TC-TAACA----TTT-ATAACCTTTCT-ATATGTCAAAACAAATGAGGATGCCT-T------------------------TAGGT----AAATCATgtaaatatc-aa-a----------tga-aa-------------ta---tatatgat-a--aaatgTG
i Rattus_norvegicus.chr8                                  C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                         366157 129 -   3329780 -ttcttg-t-t-c-c------cattttact-CTTGCTCTGCAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGGTCCCT-T------------------------TGGGT----ATATCAGGGAAATACC-AA-A----------TGA-AG-------------TATCATAAGTGAT-AA--AGTGTT
i Rhinolophus_sinicus.LVEH01000134.1                      I 2 C 0
s Rhinopithecus_bieti.k119_217274                               377 124 -     11128 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG-----GT-GTCAGCTTTCC--TATACCAGAGCACACGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACT-AA-A----------TAG-AA-------------TATGACAAGTGAT-AA--AC----
i Rhinopithecus_bieti.k119_217274                         C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                      91229755 124 - 195417433 TTTCTTT-A-C-T-C------CATTctgct-cctgctcattcc-tc-taaTG-----GT-GTCAGCTTTCC--TATACCAGAGCACACGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAAGTGAT-AA--AC----
i Rhinopithecus_roxellana.NC_044550.1                     C 0 C 0
s Rhinopithecus_strykeri.ctg102                             7665463 124 +   7961872 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG-----GT-GTCAGCTTTCC--TATACCAGAGCACACGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAAGTGAT-AA--AC----
i Rhinopithecus_strykeri.ctg102                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                 83892 129 -     96226 -TTCTTG-T-T-C-C------CATTTTGCT-CTTGCTCTGTGC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAGAGCAGATGAGGGTCCCT-T------------------------TCGGT----ATATCATATAAATACC-AA-G----------TGA-AA-------------TATCATAAGTGAT-AA--AACATT
i Rousettus_aegyptiacus.RouAeg_scaffold_11038             I 2 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                        2847 129 +      4321 -TTCCTG-T-T-C-C------CATTTTGCT-TTTGCTCTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGATCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AATGTT
i Saiga_tatarica.SaiTat_scaffold_373180                   I 2 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                     150571 127 -    313613 --TCTTT-T-T-C-C------CCT-TTGCT-CTTGGTCTGTAT-GC-TATCA----TTT-AGAAACTTTCC-ATATGGCAAAGCAGATGAGGGTCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AACGTT
i Scalopus_aquaticus.ScaAqu_scaffold_662                  C 0 C 0
s Semnopithecus_entellus.k141_11662                           13506 124 -     19888 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG-----GT-ATCAGCTTTCC--TATACCAGAGCACATGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAAGTGAT-AA--CC----
i Semnopithecus_entellus.k141_11662                       C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                       20712 124 +     39453 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG-----GT-ATCAGCTTTCC--TATACCAGAGCACATGAGGATGCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAAGTGAT-AA--CC----
i Semnopithecus_hypoleucos.k141_1615806                   C 0 C 0
s Semnopithecus_johnii.k141_670120                             1236 124 +     27826 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG-----GT-ATCAGCTTTCC--TATACCAGAGCACATGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAAGTGAT-AA--TC----
i Semnopithecus_johnii.k141_670120                        C 0 C 0
s Semnopithecus_priam.k141_638794                               756 124 -     19483 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG-----GT-ATCAGCTTTCC--TATACCAGAGCACATGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAAGTGAT-AA--CC----
i Semnopithecus_priam.k141_638794                         C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                        820 124 +      7198 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG-----GT-ATCAGCTTTCC--TATACCAGAGAACATGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAAGTGAT-AA--CC----
i Semnopithecus_schistaceus.k141_1584426                  C 0 C 0
s Semnopithecus_vetulus.k141_1200928                           9078 124 +     15514 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG-----GT-ATCAGCTTTCC--TATACCAGAGCACATGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAAGTGAT-AA--CC----
i Semnopithecus_vetulus.k141_1200928                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                      8752 131 -     12148 CTTCTTC-C-T-T-A------CATTTTGCT-CTTGGTGTCTAC-TC-TAACA----TTT-ATAAACTTTCC-ATGTGACCAAGTAAATGAGAATCTTA-T------------------------TGAGT----ATATTATGTAAGTAAC-AA-A----------TAA-AA-------------TATTATATGTGAT-AAA-AGTTTG
i Sigmodon_hispidus.SigHis_scaffold_60841                 C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840             186909 128 -    191337 --GATTT-T-T-C-C------CACTTTGCT-CTTGCTCTGTAC-TC-TAACA----TTT-ATAGACTTTCC-ATATGGCCAAGCAGATGAGGGTCCCC-T------------------------TGGGT----TTAACTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AATGTT
i Solenodon_paradoxus.SolPar_flattened_line_5840          C 0 C 0
s Sorex_araneus.JH798187.1                                 13646278 119 -  18376816 --------------t------tattttgct-ctttctgTGTA--TT-CAACA----TTT-GAAAACTTTCC-ATATGGCAAAGCAGATGAGGGTCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AATGTT
i Sorex_araneus.JH798187.1                                I 11 C 0
s Spermophilus_dauricus.KZ294078.1                          1947342 120 -   3870691 --------------a------caTTTTGCT-CTGACTCTCCAC-TC-TAACA----TTT-GCAAACTTTCC-ATATGGCAAAGCAGATGAGGATCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATACATGAT-AA--AATGTT
i Spermophilus_dauricus.KZ294078.1                        I 10 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              26434 119 +     97271 ---------------------CACTTTGCT-CTTGCTCTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGGTCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AATGTT
i Spilogale_gracilis.SpiGra_flattened_line_13525          I 11 C 0
s Suricata_suricatta.SurSur_flattened_line_6629                6384 129 -    196729 -TTCTTT-T-T-C-G------CACTTTGCT-CTGGCTCTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGAAGAGAGTCCCT-T------------------------TGGGC----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AATGTT
i Suricata_suricatta.SurSur_flattened_line_6629           I 2 C 0
s Sus_scrofa.CM000828.4                                    62881402 129 -  69701581 -ttcttg-t-t-c-c------cattttgcT-CTTGTTCTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGGTCTCT-T------------------------GGGGT----ATACCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AATGTT
i Sus_scrofa.CM000828.4                                   I 2 C 0
s Symphalangus_syndactylus.tarseq_199                       1087053 130 -   1523678 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG----TGC-ATAAACTTCCCA-TATACCAGAGCAGACAAGGATCCCT-T------------------------TGGTC----ATATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAAGTGAT-AA--ACCCTT
i Symphalangus_syndactylus.tarseq_199                     C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                  6041 129 +     41958 -TTCTGG-C-G-C-C------CTGTTTGCT-CTTGCTCTGTAC-TC-TAACA----TGT-ATAAACTTTCC-ATATGGCAAAACAGACGAGCGACCCT-T------------------------TGGGT----ATATCATGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AGTGTT
i Tadarida_brasiliensis.TadBra_scaffold_25820             I 2 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                  68657 131 +    116680 CCTTCTT-T-T-T-C------CATTTTTCT-CTGGCTTTCTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGTAAAGCAGATGAGGGACCCTTT------------------------TGGGT----ATATCGTGTAAATACC-AA-G----------TGA-AA-------------GATCAGAAGTGAT-AA--AAAGTT
i Tamandua_tetradactyla.TamTet_scaffold_1782              I 3 C 0
s Tapirus_indicus.TapInd_scaffold_9301                       114394 129 -    156842 -TTCTTC-T-T-C-C------CATTTTGCT-CATGCTCTGCAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGAGTCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AACGTT
i Tapirus_indicus.TapInd_scaffold_9301                    I 2 C 0
s Tapirus_terrestris.TapTer_scaffold_755                     382857 129 +    539355 -TTCTTG-T-T-C-C------CATTTTGCT-CATGCTCTGCAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGAGTCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AACGTT
i Tapirus_terrestris.TapTer_scaffold_755                  I 2 C 0
s Tarsius_lariang.k141_1598868                                 8770 140 -     11412 TCTTTCG-T-C-T-C------CATTTTGTT-CATGCTGTCTCC-TC-TAGCG----TTT-ACAGACTTGCA--TATGGCAAAGCAAGT-ACGATCACT-T------------------------TGGGC----AAGTCTTGTAAATATC-AC-A-----------AG-CCCCGTTTGGGGCTTTATCACAAGTGAG-AG--AATGTT
i Tarsius_lariang.k141_1598868                            C 0 C 0
s Tarsius_wallacei.k141_780063                                13486 140 +     25099 TCTTTCG-T-C-T-C------CATTTTGTT-CATGCTGTCTCC-TC-TAGCG----TTT-ACAGACTTGCA--TATGGCAAAGCAAGT-ACGATCACT-T------------------------TGGGC----AAGTCTTGTAAATATC-AC-A-----------AG-CCCCGTTTGGGGCTTTATCACAAGTGAG-AG--AATGTT
i Tarsius_wallacei.k141_780063                            C 0 C 0
s Theropithecus_gelada.CM009954.1                         186422082 133 + 186847797 TTTCTTT-A-C-T-C------CACTctgct-cctgctcattcc-tc-taaTGGTTTGTT-ATAAGCTTTCC--TATACCAGAGCAGGTGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAGGTGAT-AA--ACCCTT
i Theropithecus_gelada.CM009954.1                         C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223               102268 130 +    114563 CTTCTT-TT-T-T-A------CAGTTTGCT-CTTGCTCTGTAC-TG-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGATCCTG-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TACCACACGTGGT-AA--AATGTT
i Thryonomys_swinderianus.ThrSwi_scaffold_1223            C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                     707 131 +      8208 CCTTCTT-T-T-T-C------CATTTTTCT-CTGGCTTTCTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAAGGGCCCTTT------------------------GGGGT----ATATCTTATAAATTCC-AA-A----------TGA-AA-------------GATCAGAAGTGAT-AA--GAAGTT
i Tolypeutes_matacus.TolMat_scaffold_228639               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                      78187 129 +    610378 -CTCTTG-T-T-C-C------CGGGTTGCT-CCTGCTGTATGC-TC-TAACG----TTT-ATAAACTTTCC-ATATGGCAAAACAGAGGAGCAGCCCA-T------------------------TGGGT----GCAGCATGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AGCGTT
i Tonatia_saurophila.TonSau_scaffold_294                  I 2 C 0
s Trachypithecus_auratus.k141_722599                           4814 124 -     20410 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG-----GT-ACCAGCTTTCC--TACACCAGAGCACACGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAAGTGAT-AA--AC----
i Trachypithecus_auratus.k141_722599                      C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                      9008 124 +     15221 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG-----GT-ATCAGCTTTCC--TACACCAGAGCACACGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAAGTGAT-AA--AC----
i Trachypithecus_crepusculus.k141_1194022                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                         4914 124 +     19930 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG-----GT-ACCAGCTTTCC--TACACCAGAGCACACGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAAGTGAT-AA--AC----
i Trachypithecus_cristatus.k141_580354                    C 0 C 0
s Trachypithecus_francoisi.k141_1412647                        1342 124 -     19997 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG-----GT-ATCAGCTTTCC--TATACCAGAGCACATGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAAGTGAT-AA--AC----
i Trachypithecus_francoisi.k141_1412647                   C 0 C 0
s Trachypithecus_geei.k141_277701                             41462 124 -     60166 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG-----GT-ATCAGCGTTCC--TATACCAGAGCACATGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAAGTGAT-AA--AC----
i Trachypithecus_geei.k141_277701                         C 0 C 0
s Trachypithecus_germaini.k141_912491                          8935 124 -     27529 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG-----GT-ACCAGCTTTCC--TACACCAGAGCACACGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACT-AA-A----------TAG-AA-------------TATGACAAGTGAT-AA--AC----
i Trachypithecus_germaini.k141_912491                     C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                       8871 124 -     18194 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG-----GT-ACCAGCTTTCC--TACACCAGAGCACACGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAAGTGAT-AA--AC----
i Trachypithecus_hatinhensis.k141_143409                  C 0 C 0
s Trachypithecus_laotum.k141_907409                            2610 124 -     21137 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG-----GT-ACCAGCTTTCC--TACACCAGAGCACACGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAAGTGAT-AA--AC----
i Trachypithecus_laotum.k141_907409                       C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                     1310 124 -     10723 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG-----GT-ATCAGCTTTCC--TATACCAGAGCACATGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAAGTGAT-AA--AC----
i Trachypithecus_leucocephalus.k141_587342                C 0 C 0
s Trachypithecus_melamera.k141_434728                           466 124 +      9834 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG-----GT-ACCAGCTTTCC--TGCACCAGAGCACACGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAAGTGAT-AA--AC----
i Trachypithecus_melamera.k141_434728                     C 0 C 0
s Trachypithecus_obscurus.k141_190785                         18780 124 +     32220 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG-----GT-ACCAGCTTTCC--TACACCAGAGCACATGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAAGTGAT-AA--AC----
i Trachypithecus_obscurus.k141_190785                     C 0 C 0
s Trachypithecus_phayrei.ctg124                             5932878 124 +   6242583 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG-----GT-ACCAGCTTTCC--TGCACCAGAGCACACGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAAGTGAT-AA--AC----
i Trachypithecus_phayrei.ctg124                           C 0 C 0
s Trachypithecus_pileatus.k141_2007326                         2124 124 +     20839 TTTCTTT-A-C-T-C------CATTCTGCT-CCTGCTCATTCC-TC-TAATG-----GT-ATCAGCTTTCC--TATACCAGAGCACATGAGGATCCCT-T------------------------TGGTC----GTATCTTGTCAATACC-AA-A----------TAG-AA-------------TATGACAAGTGAT-AA--AC----
i Trachypithecus_pileatus.k141_2007326                    C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_52459                    13944 129 -     14261 -TTCCTG-T-T-C-C------CATTTAGCT-CTTGCTCTGTAC-TC-GAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGATCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-GA--AACATT
i Tragulus_javanicus.TraJav_scaffold_52459                I 2 N 0
s Trichechus_manatus.JH594705.1                             4291574 130 +  10818551 cttcttt-t-t-t-c------cattttgtt-cttgCTCTCTAC-TA-TAACG----TTT-ATAAACTTTCC-ATATGGCAAAACAGATGAGGTCCCCT-T------------------------TGAGT----ACATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCGTAAGTGAG-AA--AATGTT
i Trichechus_manatus.JH594705.1                           C 0 C 0
s Tupaia_chinensis.KB320699.1                               2148811 117 +   4065304 ----------------------gttttgct-tttgca-TCTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGACCCTT-T------------------------TGGGT----GTATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AATGTT
i Tupaia_chinensis.KB320699.1                             I 8 C 0
s Tupaia_tana.TupTan_flattened_line_97126                      2436 117 -     10553 ----------------------GTTTTGCT-TTTGCG-TCTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGATCCTT-T------------------------TGGGT----GTATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AATGTT
i Tupaia_tana.TupTan_flattened_line_97126                 I 8 C 0
s Tursiops_truncatus.MRVK01000835.1                        15736886 129 +  33153633 -TTCTTG-T-T-C-C------CATTTTGTT-CTTACTCTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAACAGATGAGAGTCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AACATT
i Tursiops_truncatus.MRVK01000835.1                       I 2 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                    50723 128 -     77625 --TCTTT-T-T-C-C------CCTCTTGCT-CTTGGTCTGTGC-TC-TACCA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGGTCCCT-T------------------------TGGGT----ATATCTTGTAAACACC-AA-A----------TGA-AA-------------TATCATAAGTGGT-AA--AATGTT
i Uropsilus_gracilis.UroGra_scaffold_12083                C 0 C 0
s Ursus_maritimus.KK499267.1                                4846124 129 -   5085361 -ttcttt-t-t-c-c------tactttgct-cttgctctgtac-tc-CAACA----TTT-ATAAACTTTCC-ATATGGCAGAGCGGATGAAGGTCCCT-T------------------------TGGGC----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGCGAT-AA--AATGTT
i Ursus_maritimus.KK499267.1                              I 2 C 0
s Varecia_rubra.k141_590885                                    6671 129 +     50397 TTCCT-T-T-T-C-C------CATTTTGCT-CTTGCTCTCTAT-GC-TAACA----TTT-GTAAACTTTCC-ATCTGGCAAAGTGGATGAGGATCTCT-T------------------------TGGGC----ATATCTTGTAAATATC-AA-A----------TAG-AA-------------TATTATAAGTGAT-AA--AATGTC
i Varecia_rubra.k141_590885                               C 0 C 0
s Varecia_variegata.k141_1128296                               6721 129 +     24756 TTCCT-T-T-T-C-C------CATTTTGCT-CTTGCTCTCTAT-GC-TAACA----TTT-GTAAACTTTCC-ATCTGGCAAAGTGGATGAGGATCTCT-T------------------------TGGAC----ATATATTGTAAATATC-AA-A----------TAG-AA-------------TATTATAAGTGAT-AA--AATGTC
i Varecia_variegata.k141_1128296                          C 0 C 0
s Vicugna_pacos.KN270157.1                                  5367579 130 -   5488506 -ttcttg-t-t-c-t------catttctct-cttgctctgtac-tcttAACA----TTT-ACAAACTTTCC-ATATGGCAAAGCAGATGAGGGTCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AATGTT
i Vicugna_pacos.KN270157.1                                I 2 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                   6488 130 -     43706 -TTCTTT-T-TCC-C------CACTCTTCT-CTTGCTCTATAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGGTCCCT-T------------------------TGGGC----ATATCATGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AATGTT
i Vulpes_lagopus.VulLag_flattened_line_30954              I 2 C 0
s Xerus_inauris.XerIna_scaffold_48378                         18861 130 -     24430 CTTCCTT-T-T-C-A------CATTTTGCT-CTGACTCTCCAC-TC-TAACA----TTT-GCAAACTTTCC-ATATGGCAAAGCAGATGAGGATCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATACATGAT-AA--AATGTT
i Xerus_inauris.XerIna_scaffold_48378                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728           1059 129 +      2932 -TTCTTT-T-T-C-C------GACTTTGCT-CTTGCTGTGTAC-TC-TAACA----TTT-ATAAACTTTCC-ATATGGCAAAGCAGATGAGGGTCTCT-T------------------------TGGGC----ATATTTTGTAAATACC-AA-A----------TGA-AA-------------TGTCATAAGTGAT-AA--AATGTT
i Zalophus_californianus.ZalCal_flattened_line_63728      I 2 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                        9154 130 +     63895 CTTGTCT-T-T-C-A------CAGTTTGCT-CTTGGTCTCTTC-TC-TCACG----TTT-ATAAACTTTCC-ATATGGCAAAGTCGACGGGGTTCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-GA-G----------TGA-AA-------------TATCACATGTGAT-AA--AATGTT
i Zapus_hudsonius.ZapHud_scaffold_11398                   C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469             10578 129 +     12536 -TTCTTG-T-T-C-C------CATTTTGCT-CTTGCTCTGTAC-TC-TAACA----CTT-ATAAACTTTCC-ATATGGCAAAACAGATGAGAGTCCCT-T------------------------TGGGT----ATATCTTGTAAATACC-AA-A----------TGA-AA-------------TATCATAAGTGAT-AA--AACATT
i Ziphius_cavirostris.ZipCav_flattened_line_71469         I 2 C 0

a score=0.000000
s hg38.chrUn_KI270753v1                                        153 43 +     62944 ACAGT--TGTCT-TATTCTTAAAGTTT-CAAATGTTTCCCATTATTT
s Acinonyx_jubatus.LLWD01001279.1                           816299 43 -   1699592 ATAGT--TGTCT-AATTCTTAAAGCTT-CAAACATTTCCCATGGTCT
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     65942 42 +     87051 ACCGT--TGTCT-AATACTTAAT-CTT-CAAGAGCTTCCTGTGGTCT
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 50 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506253 43 -  29979442 ACAGT--TGTCT-AATTCTTAAAGCTT-CAAATGTTTCCCATGGTCT
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             74545 43 -    347723 aCAGT--TGTCT-AAGTCTCAAAGCTT-CAAATGTTTCCCATGGTCT
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64289 43 -     89534 ACAGT--TGTCT-AATTCTTAATGCTT-CAAATATTTCCCATGGTCT
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 26
s Allenopithecus_nigroviridis.k141_3361533                    8630 43 -     52922 ACAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTCCCATGATTT
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          8555 43 -     28001 ACAGT--TGTCT-AATTCTTAAAGTTT-CAAACGTTTCCCATGATTT
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           8681 43 -      9772 ACAGT--TGTCT-AATTCTTAAAGTTT-CAAACGTTCCCCGTGATTT
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_2289504                         19793 43 +     20096 ACAGT--TGTCT-AATTCTTAAACTTT-CAAACGTTTCCCGTGATTT
i Allochrocebus_solatus.k141_2289504                     C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          674579 43 -   2318259 ACAGT--TGTCT-AATTTGTAACGCCT-CAAATGTTTTCCATGGTCT
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      182459 43 +    412891 ACAGT--TGTCT-AAGTCTGAATGCTT-CAAATGTTTCCCATGGTCT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97029 43 -    100397 ACAGT--TGTCT-AATTTGTAATGCCT-CAAATGTTTCCCATGGTCT
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       6533 43 +     20879 ACAGT--TGTCT-AATTCTTAATGCTT-CAAATGTTTCCTATGGTCT
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_1894080                        5287 42 +      5713 ACAAT--TGTCT-AATTCTAAGAGCTT-TAAACGTTTCCCT-GATCT
i Arctocebus_calabarensis.k141_1894080                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  1811 43 +     43469 ACAGT--TGTCT-AAGTTTGAATGCTT-CAAATGTTTCCCTCGGTCT
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  48505 42 -     92717 ACAGT--TGTCT-AATTCCAAAGGC-T-TTAATGCTTCCCCTGGTCT
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              49102 42 +     85213 ACAGT--TGTCT-AATTCCAAAGGC-T-TTAATGCTTCCCCTGGTCT
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15190871 43 +  23207421 ACAGT--TGTCT-AATTCTTAATGCCT-CAAATGTTTCCCATGGTCT
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         1337 43 -     18090 ACAGT--TGTCT-AATTCTTAATGCCT-CAAATGTTTCCCATGGTCT
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    25501 43 +     34529 ACAGT--TGTCT-AATTTGTAATGCCT-CAAATGTTTTCCATGGTCT
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    198251 43 -    288883 ACAGT--TGTCT-AATTTGTAACGCCT-CAAATGTTTCCCATGGTCT
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20271450 43 +  48749331 ACAGT--TGTCT-AATTTGTAACGCCT-CAAATGTTTCCCATGGTCT
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1124006 43 -   1948126 ACAGT--TGTCT-AATTTGTAACGCCT-CAAATGTTTCCCATGGTCT
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18082088 43 +  45695690 ACAGT--TGTCT-AATTTGTAACGCCT-CAAATGTTTCCCATGGTCT
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2817579 43 +   4408762 ACAGT--TGTCT-AATTTGTAACGCCT-CAAATGCTTCCCATGGTCT
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998251 43 -  17673402 ACAGT--TGTCT-AATCTGTAATGCCT-CAAATGTTTCCCATGGTCT
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2330706 43 -   7040546 ACAGT--TGTCT-AATCTGTAATGCCT-CAAATGTTTCCCATGGTCT
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  398959 43 -   1652518 ACAGT--TGTCT-AATCTGTAATGCCT-CAAATGTTTCCCATGGTCT
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795055 43 -  60362399 ACAGT--TGTCT-AATTCTTAAAGCTT-CAAATGTTTCCCATGGTCT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181118 43 -    185531 ACAGT--TGTCT-AATTCTTAAAGCTT-CAAATGTTTCCCATGGTCT
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9030506 43 -   9314153 ACAGT--TGTCT-AATTCTTAAAGCTT-CAAATGTTTCCCATGGTCT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17954765 43 -  59632846 ACAGT--TGTCT-AATTCTTAAAGCTT-CAAATGTTTCCCATGGTCT
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496006 43 +  63665305 ACAGT--TGTCT-AATTCTTAAAGCTT-CAAATGTTTCCCATGGTCT
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18828696 43 +  46296322 ACAGT--TGTCT-AATTTGTAACGCCT-CAAATGTTTTCCATGGTCT
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18059416 43 -  44709034 ACAGT--TGTCT-AATTTGTAACGCCT-CAAATGTTTTCCATGGTCT
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                     327 43 -     12242 ACAGT--TGCCT-GATTCTTAATGCTT-CAAATGTTTCCGATAGTCT
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           140023 35 -    496798 TCCGT--T---------CTTAAAGCTT-CAGATCCTTCCTCTGGTCT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2229 43 -     11696 ACAGT--TGTCT-ACGTTTGAATGCTT-CAAATGTTTCCCACGGCCT
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    132988 43 +    179628 ACAGT--TGTCT-AATTCTTAATGCTT-CAAATATTTTCCATGTTCT
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     88032 43 +    217609 ATAGT--TGTCT-AATTCGCCATACCT-CAAATGTTTCTCACGGTCT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18346831 43 -  23392119 ACAGT--TGTCT-AATTCTTAATGCtt-caaatgttttccaaagtCT
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18359091 43 -  23407841 ACAGT--TGTCT-AATTCTTAATGCTT-CAAACGTTTTCCAAAGTCT
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        97966 43 +    143979 ACAGT--TGTCT-AATTCTTAATGCTT-CAAATGTTTTCCAAAGTCT
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         3919 35 -      8605 TCCGT--T---------CTTAAAGCTT-CAGATCCTTCCTCTGGTCT
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227200 43 +  27778364 ACAGT--TGTCT-AATTCTTGATGCTT-CAACTGTTTCCCATGGCCT
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          1918 43 -      3715 ACAGT--TGTCT-AATTCTTGATGCTT-CAACTGTTTCCCATGGCCT
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4469599 43 +   4669795 ACAAT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTCCCATGATTT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8148 43 -     19203 ACAAT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTCCCATGATTT
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           2567 43 +      8260 ACAAT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTCCCATGATTT
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           2797 43 +     27781 ACAAT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTCCCATGATTT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         2943 43 -     20310 ACAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTCCCATGATTT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           5927 43 +     29689 ACAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTCCCATGATTT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             280 43 +      9989 ACAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTCCCATGATTT
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           8615 43 -     27936 ACAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTCCCATGATTT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             8634 43 -     11289 ACAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTCCCATGATTT
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811010 43 +  39242232 ACAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTCCCATGATTT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21216701 43 -  21565898 ACAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTCCCATGATTT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       33821 43 -     53127 ACAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTCCCATGATTT
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1113 43 +      7159 ACAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTCCCATGATTT
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        8626 43 -     27947 ACAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTCCCATGATTT
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          8602 43 +     17596 ACAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTCCCATGATTT
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39096 43 -     41420 ACAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTCCCATGATTT
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            3841 43 -      6351 ACAGT--TGTCT-AATTCTTGATGTTT-CAAATGTTTCCCATGATCT
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_1490224                            60841 42 +     61209 GCAGT--TGTCT-AATTCTGAAAGC-T-TTAATGCTTCCCCTGGTCT
i Cheirogaleus_major.k141_1490224                        C 0 C 0
s Cheirogaleus_medius.k141_1055463                           11221 42 +     57038 GCAGT--TGTCT-AATTCTGAAAGC-T-TTAATGCTTCCCCTGGTCT
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1247873 43 +   2543920 ACAGT--TGTCT-AATTCTTAATGCTT-CAAATGTTTCCCCTGGTCT
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18422565 43 -  18827391 ACAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTCCCATGATTT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9008 43 -     50209 ACAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTCCCATGATTT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416013 43 + 135778131 ACAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTCCCATGATTT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 14464 43 +     19366 ACAGT--TGTCT-AATGCTTAATGCTT-CAAATGTTTCCCATGATCT
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            169567 43 +    839153 ACAGT--TGTCT-AATGCTTAATGCTT-CAAATGTTTCCCATGATCT
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1904521 44 +   2368649 ACAGTTGTGTCT-AA-TCTTTAAGTTT-CAAGTGTTTCCCATGATTT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944139 44 + 200372422 ACAGTTGTGTCT-AA-TCTTTAAGTTT-CAAGTGTTTCCCATGATTT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31033 44 +     84244 ACGGTTGTGTCT-AA-TCTTTAAGTTT-CAAGTGTTTCCCATGATTT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545286 43 -  53390261 ACAGT--TGTCT-AATTCTTAATGCTT-CAAATGTTTCCCATGGTCT
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438           9866 43 -     20389 TCAGT--TGTCT-AATTCTTAATGCTT-CAAACACTTCCCATGGTCT
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 46203 42 +     63868 GCAGT--TGTCT-AATTCTTAAT-TTT-CAAGGGCTTTCCATGGTCT
i Cricetomys_gambianus.CriGam_scaffold_18520             I 8 C 0
s Cricetulus_griseus.LT883664.1                           11662997 37 + 224834208 ACAGT--TGTC-----TCTTATT-CTT-CAAGAGCATCCCATGGTT-
i Cricetulus_griseus.LT883664.1                          C 0 I 188
s Crocidura_indochinensis.CroInd_scaffold_603213               458 43 +      1923 ACAGT--TGTCT-AATTCTCAATATTT-CATATGTTTCCCATGGTCT
i Crocidura_indochinensis.CroInd_scaffold_603213         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             17311 43 -     87169 ACAGT--TGTCT-AATTCTTAAAGCTT-CAAATGTTTCCCTTGGTCT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    834132 43 +   1526836 ACAGT--TGTCT-AATTCTTAATGCTT-CAAATGTTTCCCTTGGCCT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  34735 43 +     51376 ACAGC--TGTCT-AATTCTTAATGCTT-CAAATGTTTCCCATGGTCT
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2208 43 +      5455 ACAGT--TGTCT-AATTCTTAATGCTT-CAAATGTTTCCCATGGTCT
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793             598 43 +      3576 ACAGT--TGTCT-AATTCTTAATGCTT-CAAATGTTTCCCATGGTCT
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            60021 42 +   2246927 ACAGT--TGTCT-AATT-TGAATGTTT-CAAATGTTTCCCATGATCT
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532195 43 -  12879189 ACAGT--TGTCT-AATTCTGAAAGCTT-TTAATGCTTCCCTTGGTCT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16810507 43 +  35494412 ACAGT--TGTCT-AATTCTTAATGCCT-CAAATGTTTCCCATGGTCT
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8627262 41 +  20541912 ACAGT--TGTCT---GTTTGAATGCTT-CAAATGTTTCCCATGGTCT
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  668730 43 +   1390856 ACAGT--TGTCT-AATTCTTAATGCTT-CAACTGTTTCCCATGGTCT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    1807 43 +    198055 ACAGT--TGTCT-AATTCTTGATGCTT-CAACTGTTTCCCATGGTCT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    33659 43 +     67921 ACAGT--TGTCT-AATTCTTAATGCTT-CACATATTTCCCATGGTCT
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18895046 32 +  37912305 acagt--tGTCT-AATTCTTAATGCTT-CAAATG-----------CT
i Dipodomys_ordii.KN672350.1                             I 582 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  11230 32 +     14536 ACAGT--TGTCT-AATTCTTAATGCTT-CAAATG-----------CT
i Dipodomys_stephensi.DipSte_scaffold_75855              I 45 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 30853 43 -     42551 ACAGT--TGTCT-AATTCTCAATGGTT-CAAATGTTTCCCAAAGTCT
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE759718.1                                   6768 43 +     11740 ACAGT--TGTCT-AATTCTTAATGCTT-CAAATCTTTCCCATGGTCT
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       309703 43 +    607251 ACAGT--TGTCT-AATTTGTAATGCCT-CAAATGTTTCCCATGGTCT
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1088368 43 +  10337057 ACAGT--TGTCT-AATTCATAATGCTT-CAAATGTTCCCCATGGTTT
i Elephantulus_edwardii.JH947257.1                       C 0 I 9
s Ellobius_lutescens.LOEQ01008920.1                          11785 42 -    110024 ACAgt--tgtat-aatttttatt-ctt-caagGCCTTTCCATGGTTT
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 206
s Ellobius_talpinus.LOJH01123422.1                            2741 42 +      5358 ACAGT--TGTCT-AATTCTTATT-CTT-CAAGGCCTTTCCATGGTTT
i Ellobius_talpinus.LOJH01123422.1                       C 0 I 200
s Enhydra_lutris.KZ291758.1                               16325120 43 -  41312741 ACAGT--TGTCT-AATTCTTAAAGCTT-CAAATGTTTCCCATGGTCT
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2143118 42 -  14770903 ACAGT--TGTCT-AAGTCTTAATGCTT-CAAATGTTT-CCATGGTCT
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279069 43 +   4378816 ACAGT--TGTCT-AATTCTTAACGCTT-CAAATGTGTCCCATGTTCT
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18526890 43 -  39960074 ACAGT--TGCCT-AATTCTTAACGCTT-CAAATGTGTCCCATGTTCT
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               28905 43 +    498745 ACAGT--TGCCT-AATTCTTAACGCTT-CAAATGTGTCCCATGTTCT
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3320098 43 -   7059049 ACAGT--TGTCT-AATTCTTAATGCTT-CAAATCTCTCCCCTGGTCT
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21199248 43 -  21539334 ACAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTCCCATGATTT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10183 43 +    133382 ACAGT--TGTCT-AATTCTTAATGCCT-CAAATGTTTCCCATGCTCT
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24121 43 -     44125 ACAGT--TGTCT-AATTCTTAATGCCT-CAAATGTTTCCCATGGTCT
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Eulemur_albifrons.k141_342033                               9206 42 -     14127 ACAGT--TGTCT-AATTCTGAAAGC-T-TTAATGCTTCCCCTGGTCT
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                1896 42 -     16928 ACAGT--TGTCT-AATTCTGAAAGC-T-TTAATGCTTCCCCTGGTCT
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              10927 42 -     25546 ACAGT--TGTCT-AATTCTGAAAGC-T-TTAATGCTTCCCCTGGTCT
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             8114 42 +     26330 ACAGT--TGTCT-AATTCTGAAAGC-T-TTAATGCTTCCCCTGGTCT
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                  9371 42 +     23973 ACAGT--TGTCT-AATTCTGAAAGC-T-TTAATGCTTCCCCTGGTCT
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 8118 42 +     75513 ACAGT--TGTCT-AATTCTGAAAGC-T-TTAATGCTTCCCCTGGTCT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  6066 42 +     97555 ACAGT--TGTCT-AATTCTGAAAGC-T-TTAATGCTTCCCCTGGTCT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                             9000 42 +     26496 ACAGT--TGTCT-AATTCTGAAAGC-T-TTAATGCTTCCCCTGGTCT
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_2367191                                  2005 42 +      2552 ACAGT--TGTCT-AATTCTGAAAGC-T-TTAATGCTTCCCCTGGTCT
i Eulemur_rufus.k141_2367191                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                               9173 42 +    111500 ACAGT--TGTCT-AATTCTGAAAGC-T-TTAATGCTTCCCCTGGTCT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20225999 43 + 206538554 ATAGT--TGTCT-AATTCTTAAAGCTT-CAAACATTTCCCATGGTCT
i Felis_catus.CM001381.2                                 C 0 I 7188
s Felis_catus_fca126.CM031415.1                           20184728 43 + 205367284 ATAGT--TGTCT-AATTCTTAAAGCTT-CAAACATTTCCCATGGTCT
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_125938                 9842 43 -     11347 ATAGT--TGTCT-AATTCTTAAAGCTT-CAAACATTTCCCATGGTCT
i Felis_nigripes.FelNig_flattened_line_125938            C 0 C 0
s Fukomys_damarensis.KN121974.1                             847877 43 +   3816255 ACAGT--TGGCT-AATTTTTAATGCTT-CAAATGTTTCCCATGGTCT
i Fukomys_damarensis.KN121974.1                          C 0 I 61
s Galagoides_demidoff.k141_31856                              1987 42 -      3432 -CAGT--TGTCT-AATTCTAAAAGCTT-TAAATGTTTCCCCTGATCT
i Galagoides_demidoff.k141_31856                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               24774 43 +     26054 ACAGT--TGTCT-CATTCCTAATGCTT-CAAATGGTGCCCACAGTCT
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     608207 43 -    660261 ACAGT--TGTCT-AATTTGTAATGCCT-CAAATGTTTCCTATGGTCT
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            29611 43 +     49224 ACAGC--TGTCT-AATTCTTAATGCTT-CAAATGTTTCCCATGGTCT
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                               9591 43 -     32273 ACAGT--TGTCT-TATTCTTAAAGTTT-CAAATGTTTCCCATTATTT
i Gorilla_beringei.k141_3596273                          n 43 I 114
s Gorilla_gorilla.LT578341.1                             186331744 43 + 186649187 ACAGT--TGTCT-TATTCTTAAAGTTT-CAAATGTTTCCCATTATTT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   29422 43 +     78134 ACAGT--TGTCT-AATTCTTAATGCTT-CAAGTGTTTCCCATGGTCT
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           2254 42 -     19426 ACACT--TGTCT-AATTCTGAAAGC-T-TTAATGCTTCCCCTGGTCT
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              7400 42 -     15286 ACACT--TGTCT-AATTCTGAAAGC-T-TTAATGCTTCCCCTGGTCT
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                              9018 43 +     18253 ACAGT--TGTCT-AATTCTGAAAGC-TATTAAAGCTTCCCCTGGTCT
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                          9141 42 -     41752 ACAGT--TGTCT-AATTCTGAAAGC-T-TTAATGCTTCCCCTGGTCT
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                          8962 43 -     16460 ACAGT--TGTCT-AATTCTGAAAGC-TATTAAAGCTTCCCCTGGTCT
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               230494 43 +    327341 ACAGT--TGTCT-AATTCTTAAAGCTT-CAAATGTTCCCCTTGGTCT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 16901 43 +     36099 ATAGT--TGTCT-AATTTGTAACGCCT-CAAATGTTTTCCATGGTCT
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20658790 43 +  22651954 ACAGG--TGTCT-AATTTTTAATGCTT-CAAATGTTTCCCATGGTCT
i Heterocephalus_glaber.JH602082.1                       C 0 I 41
s Heterohyrax_brucei.HetBruBak_scaffold_173205                2691 42 -      3357 ACAGT--TGTCT-AATTCTTAATGCTT-CAAATGT-TCCCATGGCCT
i Heterohyrax_brucei.HetBruBak_scaffold_173205           C 0 I 118
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111352 43 +    128679 ACAGT--TGTCT-AATTCGTAATGCCT-TAAAGGTTTCCCATGGTCT
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       107737 43 +   1711038 ACAGT--TGTCT-AATTCTTAATGCTT-CATATGTTTCCCTTGGTCT
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39177 43 +     43066 ACAGT--TGTCT-AATTCTTAATGCTT-CATATGTTCCTCTTGGTCT
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    428578 43 +    630532 ACAGT--TCTCT-AATTCTGAAAGTTT-CAAATGTTTCTCATGATTC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  32588 43 +     55795 ACAGT--TGTCT-AATTCTTAAAGCTT-CAAATGTTTCCCATGGTCT
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19212 43 -    143317 ACAGT--TGTCT-AATTCTCAATGCTT-CAAATGTTTCCCAAAGTCT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_307679                               11496 43 -     15490 ACAGT--TCTCT-AATTCTGGAAATTT-CAAATGTTTCTCATGATTT
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              53501 43 +     67168 ACAGT--TCTCT-AATTCTGGAAATTT-CAAATGTTTCTCATGATTT
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189536945 43 - 191637585 ACAGT--TCTCT-AATTCTGGAAATTT-CAAATGTTTCTCATGATTT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3330044 43 -  11177569 ACAGT--TCTCT-AATTCTGGAAATTT-CAAATGTTTCTCATGATTT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80287 43 +    135385 ACAGT--TGTCT-GATTCTTAATGCTT-CAGATGCTTCCTGCAGCCT
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7513838 43 -   7955117 ACAGT--TGTCT-AATTCTTAATGCTT-CAAATGTTTCCCGTGGTCT
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   17369 41 +     31101 ACAGT--TGTCT-AATTCTGAGAGT-T-TTAATGCTTCCC-TGGTCT
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               21724 43 +     23964 ACAGT--TGTCT-AATTCTTAATGCCT-CAAATGTTTCCCATGGTCT
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8270662 43 -   9596543 ACAGT--TGTCT-AGTTCTTAATGCTT-CAAATATTTCCCAtggtct
i Jaculus_jaculus.JH725527.1                             C 0 I 26
s Kogia_breviceps.KogBre_flattened_line_192630                 991 43 -      3359 ACAGT--TGTCT-AATTCTTAATGCCT-CAAACGTTTCCCATGGTCT
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    11248 43 -     42476 ACAGT--CGTCT-AAGTCTTAATGCTT-CCGATGTTCCCCATGGTCT
i Lasiurus_borealis.LasBor_scaffold_32767                I 131 C 0
s Lemur_catta.scaffold_24                                 15519500 42 -  30322482 ACAGT--TGTCT-AATTCTGAAAGC-T-TTAATGCTTCCCCTGGTCT
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6010 42 -     23766 ACAGT--TGTCT-AATTCTGAAAGC-T-TTAATGCTTCCCTTGGTCT
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             23973 42 +     45836 ACAGT--TGTCT-AATTCTGAAAGC-T-TTAATGCTTCCTTTGGTCT
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         30863 42 -     32627 ACAGT--TGTCT-AATTCTGAAAGC-T-TTAATGCTTCCCTTGGTCT
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      22063 42 +     54090 ACAGT--TGTCT-AATTCTGAAAGC-T-TTAATGCTTCCCTTGGTCT
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.APMU01165359.1                      1288 43 -      1663 ACAGT--TGTCT-AATTCTTAAAGCTT-CAAATGTTTCCCATGGTCT
i Leptonychotes_weddellii.APMU01165359.1                 C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     2931 43 -     14121 ACAGT--TGTCT-AATTCTTAATGCAT-CAAATGTTTCCCATGGTCT
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             266805 43 -    662738 ACAGT--TGTCT-AATTCTTAATGCCT-CAAATGTTTCCCATGGTCT
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1430765 43 +   1826925 ACAAT--TGTCT-AATTCCTAAAGTTT-CAAATGTTTCCCATGATTT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                            4213801 43 -  43346337 ACAGT--TGTCT-AATTCTTAATGCTT-CAAATGTTTCCCATGGCCT
i Loxodonta_africana.GL010049.1                          I 1 C 0
s Lycaon_pictus.CM007581.1                                17951005 43 -  59628241 ACAGT--TGTCT-AATTCTTAAAGCTT-CAAATGTTTCCCATGGTCT
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                                975 17 +     40492 ACAAT--TGTCT-AATTCTT---------------------------
i Macaca_arctoides.k141_2326796                          C 0 I 5
s Macaca_assamensis.Contig5                               59670235 17 +  60120075 ACAAT--TGTCT-AATTCTT---------------------------
i Macaca_assamensis.Contig5                              C 0 I 5
s Macaca_cyclopis.k119_18836                                  6733 17 -     26193 ACAAT--TGTCT-AATTCTT---------------------------
i Macaca_cyclopis.k119_18836                             C 0 I 5
s Macaca_fascicularis.k141_814140                            74524 17 -    114318 ACAAT--TGTCT-AATTCTT---------------------------
i Macaca_fascicularis.k141_814140                        C 0 I 5
s Macaca_fuscata.k119_255327                                   246 17 -     23192 ACAAT--TGTCT-AATTCTT---------------------------
i Macaca_fuscata.k119_255327                             C 0 I 5
s Macaca_leonina.k141_3550399                                 9695 17 -     29190 ACAAT--TGTCT-AATTCTT---------------------------
i Macaca_leonina.k141_3550399                            C 0 I 5
s Macaca_maura.k141_2733130                                  18266 17 +     37952 ACAAT--TGTCT-AATTCTT---------------------------
i Macaca_maura.k141_2733130                              C 0 I 5
s Macaca_mulatta.NC_041758.1                             186833354 17 + 187317192 ACAAT--TGTCT-AATTCTT---------------------------
i Macaca_mulatta.NC_041758.1                             C 0 I 5
s Macaca_nemestrina.KQ007038.1                            25451912 17 -  25927173 ACAAT--TGTCT-AATTCTT---------------------------
i Macaca_nemestrina.KQ007038.1                           C 0 I 5
s Macaca_nigra.k141_1655396                                  74115 17 +     89720 ACAAT--TGTCT-AATTCTT---------------------------
i Macaca_nigra.k141_1655396                              C 0 I 5
s Macaca_radiata.k141_3680011                                 1112 17 +     20474 ACAAT--TGCCT-AATTCTT---------------------------
i Macaca_radiata.k141_3680011                            C 0 I 5
s Macaca_siberu.k141_635500                                    913 17 -     14993 ACAAT--TGTCT-AATTCTT---------------------------
i Macaca_siberu.k141_635500                              C 0 I 5
s Macaca_silenus.Contig273                                  323545 17 -    668171 ACAAT--TGTCT-AATTCTT---------------------------
i Macaca_silenus.Contig273                               C 0 I 5
s Macaca_thibetana.k99_7456                                  15055 17 -     15935 ACAAT--TGTCT-AATTCTT---------------------------
i Macaca_thibetana.k99_7456                              C 0 I 5
s Macaca_tonkeana.k141_1498238                               19851 17 -     45290 ACAAT--TGTCT-AATTCTT---------------------------
i Macaca_tonkeana.k141_1498238                           C 0 I 5
s Macroglossus_sobrinus.MacSob_scaffold_8222                 86909 43 +     94391 ACAGT--TGTCT-AATTCTTAATGTTT-CAAATCTTTCCCATGGTCT
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23931387 40 -  24302211 ACAAT--TGTCT-AATT---AAAGTTT-CAAATGTTTCCCATGATTT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               345564 43 +    752769 ACAAC--TGTCT-AATTCTTAAAGTTT-CAAATGTTTCCCATGATTT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              14879 43 +    737560 ACAGT--TGTCT-AATTCTTAATGCTT-CAAATGTTTCCCATGGTCT
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              46273 43 -    317179 ACAGT--TGTCT-AATTCTTAATGCTT-CAAATGTTTCCCATGGTCT
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33096685 43 -  40650429 ACAGT--TGTCT-AATTCTTAATGCTT-CAAATGTTTCCCGTGGTCT
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6177 43 -    207569 ACAGT--TGTCT-AATCCTTAAGGCTT-CAGATGTTTCCCACAGTCC
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              5360 43 +     13704 ACAGT--TGTCT-AATTCTTAAAGCTT-CCAATGTTTCCCATGATCT
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 27493 41 +    140813 ATCAT--TTTCT-AATTCTTA-T-CTT-CAAAGGATTCCCATGGTCT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12177372 38 -  29670104 ACAGT--TGTCT-AAGTCTTAT----T-CAAGGGATTCCCATAATT-
i Mesocricetus_auratus.KB708134.1                        C 0 I 153
s Mesoplodon_bidens.MesBid_scaffold_108144                    2392 43 +     10310 ACAGT--TGTCT-AATTCTTAATGCCT-CAAATGTTTCCCATGGTCT
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18282231 42 -  93316391 ACAGT--TGTCT-AATTCTGAAAGC-T-TTAATGCTTCCCCTGGTCT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    14794 38 -    145209 -------TGTCT-TATTCTTAATGATT-CGAATGTTTCCCATCATCT
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 19
s Micronycteris_hirsuta.MicHir_scaffold_52381                12776 43 -     19307 TCAGT--TGTCT-AAGTCTGAATGCTT-CAAATGTTTCCCATGGTCT
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11255731 42 -  27267610 ACAGT--TGTCT-AATTCTTATT-CTT-CACAACCTTTCCATAGTTT
i Microtus_ochrogaster.CM001695.1                        C 0 I 190
s Miniopterus_natalensis.LDJU01000034.1                    1848206 43 +   8254450 ACAGT--TGTCT-AAGTGTTACTGCCT-CAAATGTTTCCCATGGTCT
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32075 43 +     64694 ACAGT--TGTCT-AAGTGTTACTGCCT-CAAATGTTTCCCATGGTCT
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3121 43 -     28506 ACAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTCCCATGATTT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        61539 43 -     63350 ACAGT--TGTCT-AATTCTTAAAGCTT-CAAATGTTTCCCATGGTCT
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_1511790                                    38233 42 +     38511 ACAGT--TGTCT-AATTCTGAAAGC-T-TTAATGCTTCCCCTGGTCT
i Mirza_zaza.k141_1511790                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    25897 43 -    437263 ACAGT--TGTCT-AATTCTTAATGCCT-CAAATGTTTCCCATGGTCT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137166 43 -    366855 ACAGT--TGTCT-AAGTTTTAATGCTT-CGAATGTTTCCCATGGTCT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_61429                  26841 43 -     27816 ACAGT--TGTCT-AATTTGTAATGCCT-CAAATGCTTCCCATGGTCT
i Moschus_moschiferus.MosMos_scaffold_61429              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   23666 43 +     37127 ACAGT--TGTCT-AATTCTTAAAGCTT-CAAATGTTCCCCTTGGTCT
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           4267 43 +     14753 ACAGT--TGTCT-AAGTCTTAATGCTT-CAAATGTTTCCCACAGTCT
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              1626 43 +     14296 ACAGT--TGTCT-AAATCTTAGTGCTT-CAAACATTCCCCATGGTCT
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               297005 43 -  14710649 ACAGT--TGTCT-AATTCTTAAAGCTT-CAAATGTTTCCCATGGTCT
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     70460 43 -     80779 ACAGT--TGTCT-AATTCTTAATGCTT-CAAATGTTTCCAACAGTCT
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                277373 43 -  10118263 ACAGT--TGTCT-AAGTCTTAATGCTT-CAAATGTTTCCCATAGTCT
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1584945 43 -   6019432 ACAGT--TGTCT-AAGTCTTAATGCTT-CAGATGTTTCCCATAGTCT
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3901162 43 -   4330536 ACAGT--TGTCT-AAGTCTTAATGCTC-CAAATGTTTCCCATAGTTT
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        31712 43 +     33610 ACAGT--TGTCT-AAGTCTTAATGCTT-CAAATGTTTCCCATAGTTT
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              185429 43 +    196477 ACAGT--TGTCT-AATTTTTAATGCTT-CAAATGTTTGCCATGGTCT
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2024823 43 -   3037898 ACAGT--TGTCT-AATTCCTAATGCTT-CAGATGTTTCCCATGGTCT
i Nannospalax_galili.KL204047.1                          C 0 I 52
s Nasalis_larvatus.k141_413338                                9131 42 +     21681 -CAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTCCCATGATTT
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20298530 43 +  31847680 ACAGT--TGTCT-AATTCTTAAAGCTT-CACATGTTTCCCATGGTCT
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5864853 43 +   7148211 ACAGT--TGTCT-AATTCTTAATGCCT-CAAATGTTTCCCATGGTCT
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    755738 44 +    783361 ACAGT--TGTCTTAAGTGTTAATGCTT-CAAATGTTTCCCATGGTCT
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145201 43 -   9404916 ACAGT--TGTCT-AATTCCTAAAGCTT-CAAATGTTTCCCATGGTCT
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102569092 43 - 196305487 ACAGT--TGTCT-AATTCTAAGAGCTT-TAAATGCTTCCCTTGATCT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_7325916                             3871 43 -      4362 ACAGT--TGTCT-AATTCTAAGAGCTT-TAAATGCTTCCCTTGATCT
i Nycticebus_coucang.k141_7325916                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105733123 43 + 199412804 ACAGT--TGTCT-AATTCTAAGAGCTT-TAAATGCTTCCCTTGATCT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355041 43 +   3988456 ACAGT--TGTCT-AATTCTTGATGCTT-CAAATGTTTCCCCTGGTCT
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  745756 43 +  11899542 ACAGT--TGTCT-AATCCTTAATGCTT-CAAATGTTTCCCATGGTCT
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                              500057 43 -   2017862 ACAGT--TGTCT-AATTCTTAAAGCTT-CAAATGTTTCCCATGGTCT
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         144078 43 +    630418 ACAGT--TGTCT-AATTTGTAATGCCT-CAAATGTTTCCCATGGTCT
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          76123 43 -    150152 ACAGT--TGTCT-AATTTGTAATGCCT-caaatgtttcccatggtct
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   16043 42 +     28053 ACAGT--TGTCT-AATTCTTATT-CTT-CAAGACCTTTCCATGGTTT
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 195
s Onychomys_torridus.OnyTor_scaffold_2986                    74073 42 +    102263 ACAGT--TGTCT-AGTTCTTATA-TTT-CAAGAGCTTCCTATAATTT
i Onychomys_torridus.OnyTor_scaffold_2986                I 3 I 287
s Orcinus_orca.KB316932.1                                  2780768 43 -  10937097 ACAGT--TGTCT-AATTCTTAATGCCT-CAAATGTTTCCCATGGTCT
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6167 43 -     18566 ATAGT--TGTCT-AATTCTTAATGCTT-CAAATGTTTCCCATGGTCT
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 I 9
s Oryctolagus_cuniculus.CM000791.1                        67143784 43 + 174332312 ACAGT--TGTCT-AATTCTTAATGCAT-CAAATGTTTCCCATGGTCT
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       457961 43 -    559221 ACAGT--TGTCT-AGTTCTTAAAGCTT-CAAATGTTTCCCATGGTCT
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17584436 43 +  44047080 ACAGT--TGTCT-AATTTGTAACGCCT-CAAATGTTTTCCATGGTCT
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      172853 43 -    191736 ATAGT--TGTCT-AATTTGTAATGCCT-CAAATGTTTTCCATGGTCT
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    35515 43 +     80009 ACAGT--TGTCT-TATTCTTAAAGTTT-CAAATGTTTCCCATTATTT
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189136465 43 + 189151597 ACAGT--TGTCT-TATTCTTAAAGTTT-CAAATGTTTCCCATTATTT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  139941 43 +    230217 ATAGT--TGTCT-AATTCTTAAAGCTT-CAAACATTTCCCATGGTCT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                251470 43 +  18783137 ATAGT--TGTCT-AATTCTTAAAGCTT-CAAACATTTCCCATGGTCT
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4709911 43 -   8748460 ATAGT--TGTCT-AATTCTTAAAGCTT-CAAACATTTCCCATGGTCT
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1263786 43 -   2937107 ACAGT--TGTCT-AATCTGTAACGCCT-CAGATGTTTTCCATGGTCT
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183436706 43 + 183742232 ATAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTCCCATGATTT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                              768 43 +     20448 ATAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTCCCATGATTT
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20557390 43 +  20919399 ATAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTCCCATGATTT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_4051466                                    968 43 -      1598 ATAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTCCCATGATTT
i Papio_kindae.k141_4051466                              C 0 C 0
s Papio_papio.k141_802527                                     2800 43 +     27711 ATAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTCCCATGATTT
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  2789 43 +      9205 ATAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTCCCATGATTT
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272       734 43 -     78924 ACAGT--TGTCT-AATTCTTAAAGCTT-CAAATGTTTCCCATGATCT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 128 I 118
s Perognathus_longimembris.PerPac_flattened_line_34437       24531 43 +     32600 ACAGT--TGTCT-AATTTTTAATGCTT-CCAATGTTTCCCAATGTCT
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18186896 42 -  18517816 ACAGT--TGTCT-AGTTCTTGTA-TTT-CAAGAGCTTCCCATGATTT
i Peromyscus_maniculatus.KI615324.1                      C 0 I 236
s Petromus_typicus.PetTyp_scaffold_42190                     25243 43 -     29689 ACAGT--TGTCT-AATTTTTAATGCTT-CAAATGTTTCCCGTGGTCT
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 I 61
s Phocoena_phocoena.PhoPho_flattened_line_24159               7815 43 +     63832 ACAGT--TGTCT-AATTCTTAATGCCT-CAAATGTTTCCCATGGTCT
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           37648 43 +     62158 ACAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTCCCATGATTT
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        32377 43 +     89929 ACAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTCCCATGATTT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            33793 43 +     51399 ACAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTCCCATGATTT
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290012 43 -  14605196 ACAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTCCCATGATTT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_7723             78731 43 +     79650 ACAGT--TGTCT-AAGTCTTAATGCTT-CAAATGTTTCCCATGGTCT
i Pipistrellus_pipistrellus.PipPip_scaffold_7723         C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           33527 43 +     35617 ACAGT--TGTCT-AATTCTTAATGCCT-CAAATGTTTCCCATGGTCT
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189124554 43 + 189387572 ACAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTCCCATGATTT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9564397 43 +   9816681 ACAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTCCCATGATTT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               67291 42 -     81375 -CAGT--TGTCT-GATTCTTAAAGTTT-CAAATGTTTCCCATGATTT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9111 42 +     10147 -CAGT--TGTCT-GATTCTTAAAGTTT-CAAATGTTTCCCATGATTT
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9299 42 -     22811 ACAGT--TGTCT-AATTCTTAATGCTT-CAAATGT-TCCCATGGCCT
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2592149 42 -   4620579 ACAGT--TGTCT-AATTCTGAAAGC-T-TTAATGCTTCCCCTGGTCT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     985262 42 +   2598838 ACAGT--TGTCT-AATTCTGAAGGC-T-TTAATGCTTCCCCTGGTCT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          23554 42 +     38485 ACAGT--TGTCT-AATTCTGAAGGC-T-TTAATGCTTCCCCTGGTCT
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_1034595                           11641 42 -     12046 ACAGT--TGTCT-AATTCTGAAGGC-T-TTAATGCTTCCCCTGGTCT
i Propithecus_diadema.k141_1034595                       C 0 C 0
s Propithecus_edwardsi.k141_1176054                          21082 42 +     35766 ACAGT--TGTCT-AATTCTGAAGGC-T-TTAATGCTTCCCCTGGTCT
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1630595                          16329 42 +     17239 ACAGT--TGTCT-AATTCTGAAGGC-T-TTAATGCTTCCCCTGGTCT
i Propithecus_perrieri.k141_1630595                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        23088 42 -     67325 ACAGT--TGTCT-AATTCTGAAGGC-T-TTAATGCTTCCCCTGGTCT
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_1019028                         12804 42 -     13615 ACAGT--TGTCT-AATTCTGAAGGC-T-TTAATGCTTCCCCTGGTCT
i Propithecus_verreauxi.k141_1019028                     C 0 C 0
s Psammomys_obesus.NESX01036370.1                             5135 41 -     21651 ATCAT--TTTCT-AATTCTTA-T-CTT-CAAGGGATTCCCATGGTCT
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            10548 43 -     21811 ACAGT--TGTCT-AAGTTTTAATGCTT-CAAATGTTTCCCATGCTCT
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36026 43 +     42204 ACAGT--TGTCT-AATTCTTAAAGCTT-CAAATGTTTCCCATGGTCT
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973041 43 +  28871421 ACAGT--TGTCT-AATTCTTAATGCTT-CAAATCTTTCCCATGGTCC
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1356033 43 +   4952924 ACAGT--TGTCT-AATTCTTAATGCTT-CAAATCTTTCCCATGGTCT
i Pteropus_vampyrus.KN525825.1                           C 0 I 1374
s Puma_concolor.QAVW01001104.1                            20262448 43 -  38429054 ATAGT--TGTCT-AATTCTTAAAGCTT-CAAACATTTCCCATGGTCT
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                              9119 42 -     91421 -CAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTCCCATGATTT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603250 42 +   7812017 -CAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTCCCATGATTT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9087 42 -     72585 -CAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTCCCATGATTT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4326 43 +     55207 ACAGT--TGTCT-AATTTGTAATGCCT-CAAATGTTTCCCATGGACT
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr8                                  20365266 41 + 133307652 ACTGT--TATAT-AATTCTTAAT-TTT-CAAGGGC-TCACATGGTAT
i Rattus_norvegicus.chr8                                 C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        366286 43 -   3329780 ACAGT--TGTCT-AATTCTTAATCCTC-CCAATGTTTCCCTTGGTCT
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                              501 42 -     11128 -CAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTCCCATGATTT
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91229879 42 - 195417433 -CAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTCCCATGATTT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7665587 42 +   7961872 -CAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTCCCATGATTT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84021 43 -     96226 ACAGT--TGTCT-AATTTTTAATGCTT-CAAATCTTTCCCATGGTCT
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       2976 43 +      4321 ACACT--TGTCT-AATTTATAACGCCT-CAAATGTTTCCCATGGTCT
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    150698 43 -    313613 ACAGT--TTTCT-AATTCTTAATGCTT-CAAATGTTTCCCATGGTCT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          13630 42 -     19888 -CAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTTCCATGATTT
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      20836 42 +     39453 -CAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTTCCATGATTT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            1360 42 +     27826 -CAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTTCCATGATTT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                              880 42 -     19483 -CAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTTCCATGATTT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                       944 42 +      7198 -CAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTTCCATGATTT
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9202 42 +     15514 -CAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTTCCATGATTT
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                     8883 42 -     12148 ATAGT--TGTCT-GATTTTTATT-CCT-CAGGGGCTTCCCATGGGTT
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 I 203
s Solenodon_paradoxus.SolPar_flattened_line_5840            187037 43 -    191337 ACAGT--TGTCT-AATTCTTAATGCTT-CAAATGTTTCCCATGGTTT
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 I 23
s Sorex_araneus.JH798187.1                                13646397 43 -  18376816 ACAGT--TGTCT-AATTCTCAATGCTT-CATATATTTCTCATGGTCT
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1947462 43 -   3870691 ACAGT--TGTCT-AATTCTTAATGCTT-CAAATGTTTCCCGTGGTCT
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             26553 43 +     97271 ACAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTCCCATGGTCT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629               6513 43 -    196729 ACAGT--TGTCT-AATTCTTAAAGCTT-CAAATGTTTCCCTTGGTCT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   62881531 43 -  69701581 ACAGT--TGTCT-AATTCACAATGCCT-CAAATGTTTCTCACAATCT
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1087183 43 -   1523678 ACAGT--TCTCT-AATTCTGGAAATTT-CAAATGTTTCTCATGATTT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6170 43 +     41958 ACAGT--TGTCT-CAGTCTTAATGCTT-CCGATGTCTCCCGTGGTCT
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 68788 43 +    116680 ACAGT--TGTCT-AATTTTTAATGCTT-CAAATGTTTGCCATGATCT
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      114523 43 -    156842 ACAGT--TGTCT-AATTCTTACTGCTT-CAAATGTTTCCTGTGGTCT
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    382986 43 +    539355 ACAGT--TGTCT-AATTCTTACTGCTT-CAAATGTTTCCTGTGGTCT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1598868                                8910 35 -     11412 TCGGT--T---------CTTAAAGCTT-CAGATCCTTCCCGTGGTCT
i Tarsius_lariang.k141_1598868                           C 0 C 0
s Tarsius_wallacei.k141_780063                               13626 35 +     25099 TCGGT--T---------CTTAAAGCTT-CAGATCCTTCCCGTGGTCT
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422215 43 + 186847797 ATAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTCCCATGATTT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              102398 43 +    114563 ATAGT--TGTCT-AATTTTTAATGCTT-CAAATGTTTCCCGTGGTCG
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 61
s Tolypeutes_matacus.TolMat_scaffold_228639                    838 43 +      8208 ACAGT--TGTCT-AATTCTTAATGTTT-CAAATGTTTCCCAGGATCT
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78316 43 +    610378 ACAGT--TGTCT-GAGTTTGAATGCTT-CAAATGTTTCCCAGGGTCT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          4938 42 -     20410 -CAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTTCCATGATTT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9132 42 +     15221 -CAGT--TGTCT-AATTCTTAAAGTTT-CACATGTTTTCCATGATTT
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5038 42 +     19930 -CAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTTCCATGATTT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       1466 42 -     19997 -CAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTTCCATGATTT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            41586 42 -     60166 -CAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTTCCATGATTT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9059 42 -     27529 -CAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTTCCATGATTT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      8995 42 -     18194 -CAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTTCCATGATTT
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           2734 42 -     21137 -CAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTTCCATGATTT
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    1434 42 -     10723 -CAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTTCCATGATTT
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                          590 42 +      9834 -CAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTTCCATGATTT
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        18904 42 +     32220 -CAGT--TGTCT-CATTCTTAAAGTTT-CAAATGTTTTCCATGATTT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933002 42 +   6242583 -CAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTTCCATGATTT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2248 42 +     20839 -CAGT--TGTCT-AATTCTTAAAGTTT-CAAATGTTTTCCATGATTT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_124071                     11 43 -      2171 ACAGT--GATCT-AATTTGTAATGCCT-CAAATGTTTCCCATGGTCT
i Tragulus_javanicus.TraJav_scaffold_124071              N 0 C 0
s Trichechus_manatus.JH594705.1                            4291704 43 +  10818551 ACCGT--TGTCT-AACTCTTAATGCTT-CAAATGTTTCCCATGGCCT
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2148928 42 +   4065304 ACAGT--TGTCT-CATTTTTAATGCTT-CAGATGCTCCCCATG-TCT
i Tupaia_chinensis.KB320699.1                            C 0 I 25
s Tupaia_tana.TupTan_flattened_line_97126                     2553 42 -     10553 ACAGG--TGTCT-CGTTTTTAATGCTT-CAGATGCTTCCCATG-TCT
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 25
s Tursiops_truncatus.MRVK01000835.1                       15737015 43 +  33153633 ACAGT--TGTCT-AATTCTTAATGCCT-CAAATGTTTCCCATGGTCT
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   50851 43 -     77625 ACAGT--TGTCT-GATTCTTAATGCTT-CAAATGTTTCCCATGGTCT
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4846253 43 -   5085361 ACAGT--TGTCT-AATTCTTAAAACTT-CAAATGTTTCCCATGGTCT
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   6800 42 +     50397 ACAGT--TGTCT-AATTCTGAAAGC-T-TTAATGCTTCCCCTGGTCT
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              6850 42 +     24756 ACAGT--TGTCT-AATTCTGAAAGC-T-TTAATGCTTCCCCTGGTCT
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5367709 43 -   5488506 ACAGT--TGTCT-AATCTGTAATGCCT-CAACTGTTTCCCATGGTCT
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  6618 43 -     43706 ACAGT--TGTCT-AATTCTTAAAGCTT-CAAATGTTTCCCATGGTCT
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        18991 43 -     24430 ACAGT--TGTCT-AATTCTTAATGCTT-CAAATGTTTCCCATGGTCT
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1188 43 +      2932 ACAGT--TGTCT-AATTCTTAAAGCTT-CAAATGTTTCCCATGGTCT
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9284 36 +     63895 ACAGT--TGTC-------TTAATGCTT-CAAACATTTC-CGTGGTCT
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            10707 43 +     12536 ACAGT--TGTCT-AATTCTTAATGCCT-CAAATGTTTCCCATGGTCT
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0

a score=0.000000
s hg38.chrUn_KI270753v1                                         196 114 +     62944 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TTC-TCGTTCCTGTGGAACTGG-A-AA-GATTTAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AGTGGGAA-------A---------------------------C----AAA-GCA-------C
s Acinonyx_jubatus.LLWD01001279.1                            816342 118 -   1699592 CTCAACT----------GTGG------CCTCAT-AAGT--AT-AGCC-GC----------A-AA--ACCACCC-TCCTTTCTTTTGAACTGG-A-AT-AATTTAC------A-GATTCTTTC--CAGAATTTCAACCTT-CGA--------------------TTTAAGT----------------------A--------------g---------------------tacaaag----aaa-aca-------a
i Acinonyx_jubatus.LLWD01001279.1                         C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                      65984 116 +     87051 TTTGACT----------GTGA------CCTCAT-ACAT--GT-AGGA-GT----------A-AA--AC-ATCC-TTCTTTGTGTTTCCCTGG-G-AT-AAT----T-C---C-AAGTCTTTC--CTGAATTTCAACTCA-CAA--------------------TTTAAGC----------------------A--------------G--CAA-------T--GA---------GC----AAA-GCT-------T
i Acomys_cahirinus.AcoCah_scaffold_12655                  C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                     9506296 118 -  29979442 CTCCACT----------GTGG------CCTCAT-ATGT--GT-AGCT-GC----------A-AA--ATCATCC-TACTTCCTGTTGAATTGG-A-AT-AATTTAC------A-GATTCTTTC--CTGAATTTCAACCTT-CAA--------------------TTTAAAC----------------------A--------------GTACAAA---------------------C----AAA-GCA-------T
i Ailuropoda_melanoleuca.LNAT01000098.1                   C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                              74588 104 -    347723 CTCCACT----------GTGG------CCTCAT-ATGT--GT-ACCA-GC----------A-AA--ATCATCC-TCCTTCCTGTCAAATTGG-A-AT-AATTTAC------A-Gattctttt--ctgaatttcaaCCTT-CAA--------------------TTGAAGC----------------------A--------------G-----------------------------------------------
i Ailurus_fulgens.LNAC01001112.1                          C 0 I 10
s Allactaga_bullata.AllBul_scaffold_9566                      64358  77 -     89534 -----------------------------------------------------------------------------TTCCTGTAGTTCTGG-A-AT-AAT----TT-AC-A-GTTCCTTTC--TTGAATTTCAGCCTT-CAA--------------------CTTAAAC----------------------A--------------GTG-A--------T-A-AA---------C----AAA-GCA-------C
i Allactaga_bullata.AllBul_scaffold_9566                  I 26 C 0
s Allenopithecus_nigroviridis.k141_3361533                     8673 110 -     52922 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAGCCCT-CAA--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Allenopithecus_nigroviridis.k141_3361533                C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                           8598 110 -     28001 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Allochrocebus_lhoesti.k141_4309873                      C 0 C 0
s Allochrocebus_preussi.k141_310680                            8724 110 -      9772 CTCCACC----------GTGG------CCTCAT-ATAC--GT-CGCT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Allochrocebus_preussi.k141_310680                       C 0 C 0
s Allochrocebus_solatus.k141_2289504                          19836 110 +     20096 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Allochrocebus_solatus.k141_2289504                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                           674622 118 -   2318259 CTCAACT----------GTAG------CCTCAT-ATGT--GT-AGTT-GA----------A-AA--ACCATCC-TTCTTCCTGTTGAACTGG-A-AT-AATTTAC------A-GTTTCTTTC--CGGAATCTCAACCCT-CAA--------------------TTTAAGC----------------------A--------------GTGCAA-------T--------------C----AAA-GCA-------T
i Ammotragus_lervia.NIVO01071767.1                        C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                       182502 115 +    412891 CTCAGCT----------GCGG------CCTCGT-ATGT--GT-AGTT-GC----------A-AACCA---TCA-CTCTGCCGGTTAAACTGG-A-AT-AATTT--------A-GTTTCTTTC--CTGAATTTCAACTCT-CAA--------------------TTTAAGC----------------------A--------------GTGCAAA---------------------C----AAA-GCA-------T
i Anoura_caudifer.AnoCau_scaffold_1412                    C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469              97072 118 -    100397 CTCAACT----------GTAG------CCTCAT-ATGT--AT-AGTT-GA----------A-AA--ACCATCC-TTCTTCCTGTTGAACTGG-A-AT-AATTTAC------A-GTTTCTTTC--CGGAATTTCAACCCT-CAG--------------------TTTAAGC----------------------A--------------GTGCAA-------T--------------C----AAA-GCA-------T
i Antilocapra_americana.AntAmePen_scaffold_12469          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                        6576 119 +     20879 TTCAACT----------GTGA------CCTCAT-CTGT--GT-AGCT-AC----------A-AA--ACCATCC-TCCTTCCTGTTGAGCTGA-A-AT-AAT----TT-AC-A-GCTTCCTTC--CTGAATTTCAACCCT-CAA--------------------TTTAAGC----------------------A--------------GTG-A--------TTA-A----------C----AAA-ACA-------G
i Aplodontia_rufa.AprRuf_scaffold_68852                   C 0 C 0
s Arctocebus_calabarensis.k141_1894080                         5329 112 +      5713 CTCTACT----------GTGA------CCTCAC-ATGT--GT-AGTT-AT---------AA-AAC-A--AACC-TCCTTCCTGTGGAACTAG-A-AT-AATTTAC------A-GTTTATTTC--CTGAATTCCAACCCT-CAC--------------------TTTAAGC----------------------A--------------A---------------------------C----GAA-GCT-------C
i Arctocebus_calabarensis.k141_1894080                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                   1854 115 +     43469 CTTGACT----------GTGG------CCTCAT-ATGT--GT-AGTT-GC----------A-AACCA---TCA-CTCTGCCCATTAAACTGG-G-AT-AATTT--------A-GTTTCTTTC--CTGAATTTCAACTCT-CAA--------------------TTGAAGC----------------------A--------------GTGCAAA---------------------C----AAA-GCA-------T
i Artibeus_jamaicensis.ArtJam_scaffold_25439              C 0 C 0
s Avahi_laniger.k141_765380                                   48547 111 -     92717 -TGGACT----------GTGG------CCTCAT-ATGT--GT-AGTT-GC---------AA-AACCA---TCC-TTCTTCCTGTGGAGCTGG-A-AT-AATTTAC------A-GTTTCTTTC--CTGCATTTCAACCCT-Caa--------------------tgtatgc----------------------a--------------g---------------------------c----aaa-gca-------c
i Avahi_laniger.k141_765380                               C 0 C 0
s Avahi_peyrierasi.k141_1424874                               49144 111 +     85213 -TGGACT----------GTGG------CCTCAT-ATGT--GT-AGTT-GC---------AA-AACCA---TCC-TTCTTCCTGTGGAGCTGG-A-AT-AATTTAC------A-GTTTCTTTC--CTGCATTTCAACCCT-CAA--------------------TGTATGC----------------------A--------------G---------------------------C----AAA-GCA-------C
i Avahi_peyrierasi.k141_1424874                           C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    15190914 118 +  23207421 CTCAACT----------GTAG------CCTAAT-ATGT--GT-AGTT-GA----------A-AA--ACCATTC-TCCTTCCTGTTGAACTGG-A-AT-AATTTAC------A-ATTTCTTTC--CAGAACTTCAACCCT-CAA--------------------TTTAAGC----------------------A--------------GTGCAA-------T--------------C----AAA-GCA-------T
i Balaenoptera_acutorostrata.KI537508.1                   C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                          1380 118 -     18090 CTCAACT----------GTAG------CCTAAT-ATGT--GT-AGTT-GA----------A-AA--ACCATTC-TCCTTCCTGTTGAACTGG-A-AT-AATTTAC------A-ATTTCTTTC--CAGAATTTCAACCCT-CAA--------------------TTTAAGC----------------------A--------------GTGCAA-------T--------------C----AAA-GCA-------T
i Balaenoptera_bonaerensis.DF707048.1                     C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                     25544 118 +     34529 CTCAACT----------GTAG------CCTCAT-ATGT--GT-AGTT-GA----------A-AA--ACCATCC-TTCTTACTGTTGAACTGG-A-AT-AATTTAC------A-GTTTCTTTC--TGGAATCTCAACCCT-CAA--------------------TTTAAGC----------------------A--------------GGGCAA-------T--------------C----AAA-GCA-------T
i Beatragus_hunteri.BeaHun_scaffold_50177                 C 0 C 0
s Bison_bison.KN261452.1                                     198294 118 -    288883 CTCAACT----------GTAG------CCTCAT-ATGT--GT-AGTT-GA----------A-AA--ACCATCC-TTCTTCCTGTTGAACTGG-A-AT-AATTTAC------A-GTTTCTTTC--CGGAATTTCAGCCCT-CAA--------------------TTTAAGC----------------------A--------------GTGCAA-------T--------------C----AAA-GCA-------T
i Bison_bison.KN261452.1                                  C 0 C 0
s Bos_indicus.CM003047.1                                   20271493 118 +  48749331 CTCAACT----------GTAG------CCTCAT-ATGT--GT-AGTT-GA----------A-AA--ACCATCC-TTCTTCCTGTTGAACTGG-A-AT-AATTTAC------A-GTTTCTTTC--CGGAATTTCAGNCCT-CAA--------------------TTTAAGC----------------------G--------------GTGCAA-------T--------------C----AAA-GCA-------T
i Bos_indicus.CM003047.1                                  C 0 C 0
s Bos_mutus.JH880303.1                                      1124049 118 -   1948126 CTCAACT----------GTAG------CCTCAT-ATGT--GT-AGTT-GA----------A-AA--ACCATCC-TTCTTCCTGTTGAACTGG-A-AT-AATTTAC------A-GTTTCTTTC--CGGAATTTCAGCCCT-CAA--------------------TTTAAGC----------------------A--------------GTGCAA-------T--------------C----AAA-GCA-------T
i Bos_mutus.JH880303.1                                    C 0 C 0
s Bos_taurus.CM000203.6                                    18082131 118 +  45695690 CTCAACT----------GTAG------CCTCAT-ATGT--GT-AGTT-GA----------A-AA--ACCATCC-TTCTTCCTGTTGAACTGG-A-AT-AATTTAC------A-GTTTCTTTC--CGGAATTTCAGCCCT-CAA--------------------TTTAAGC----------------------G--------------GTGCAA-------T--------------C----AAA-GCA-------T
i Bos_taurus.CM000203.6                                   C 0 C 0
s Bubalus_bubalis.KI419123.1                                2817622 118 +   4408762 CTCAACT----------GTAG------CCTCAT-ATGT--GT-AGTT-GA----------A-AA--ACCATCC-TTCTTCCTGTTGAACTAG-A-AT-AATTTAC------A-CTTTCTTTC--CGGAATTTCAACCCT-CAA--------------------TTTAAGC----------------------A--------------GTGCAA-------T--------------C----AAA-GCA-------T
i Bubalus_bubalis.KI419123.1                              C 0 C 0
s Camelus_bactrianus.KN276810.1                             9998294  92 -  17673402 CTCAACT----------GTAG------CCTCAT-ATGT--GT-AGTT-GA----------A-AA--ACCATCC-TCCTTCCTGTTGAACTGG-A-AT-AATTTAc------a-atttctttc--tggaatttcaaccct--------------------------------------------------------------------------------------------------------------------
i Camelus_bactrianus.KN276810.1                           C 0 I 1
s Camelus_dromedarius.KN272107.1                            2330749 103 -   7040546 CTCAACT----------GTAG------CCTCAT-ATGT--GT-AGTT-GA----------A-AA--ACCATCC-TCCTTCCTGTTGAACTGG-A-AT-AATTTAc------a-atttctttc--tggaatttcaaCCCT-CAA--------------------ATtaagc----------------------a--------------------------------------------------------------
i Camelus_dromedarius.KN272107.1                          C 0 C 0
s Camelus_ferus.KB017975.1                                   399002 125 -   1652518 CTCAACT----------GTAG------CCTCAT-ATGT--GT-AGTT-GA----------A-AA--ACCATCC-TCCTTCCTGTTGAACTGG-A-AT-AATTTAc------a-atttctttc--tggaatttcaaCCCT-CAA--------------------ATTAAGCAGTGCAATCAAAGCATCGtatca--------------------------------------------------------------
i Camelus_ferus.KB017975.1                                C 0 C 0
s CanFam4.chr16                                            17795098 117 -  60362399 CTCCACT----------GTGG------CCTCAT-ATGT--GT-AGCT-G-----------A-AA--ATCATCC-TCCATCCTGTAGAACTAG-A-AT-AATTTAC------A-AATTCTTTC--CTGAATATCAACCTT-CAA--------------------TTTAAGC----------------------A--------------GTACAAA---------------------C----AAA-GCA-------T
i CanFam4.chr16                                           C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                     181161 117 -    185531 CTCCACT----------GTGG------CCTCAT-ATGT--GT-AGCT-G-----------A-AA--ATCATCC-TCCATCCTGTAGAACTAG-A-AT-AATTTAC------A-AATTCTTTC--CTGAATATCAAcctt-caa--------------------tttaagc----------------------a--------------g---------------------tacaaac----aaa-gca-------t
i Canis_lupus_VD.CanFam_VD_scaffold_7008                  C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          9030549 117 -   9314153 CTCCACT----------GTGG------CCTCAT-ATGT--GT-AGCT-G-----------A-AA--ATCATCC-TCCATCCTGTAGAACTAG-A-AT-AATTTAC------A-AATTCTTTC--CTGAATATCAACCTT-CAA--------------------TTTAAGC----------------------A--------------GTACAAA---------------------C----AAA-GCA-------T
i Canis_lupus_dingo.QKWQ01000480.1                        C 0 C 0
s Canis_lupus_familiaris.chr16                             17954808 117 -  59632846 CTCCACT----------GTGG------CCTCAT-ATGT--GT-AGCT-G-----------A-AA--ATCATCC-TCCATCCTGTAGAACTAG-A-AT-AATTTAC------A-AATTCTTTC--CTGAATATCAACCTT-CAA--------------------TTTAAGC----------------------A--------------GTACAAA---------------------C----AAA-GCA-------T
i Canis_lupus_familiaris.chr16                            C 0 C 0
s Canis_lupus_orion.HG994398.1                             18496049 112 +  63665305 CTCCACT----------GTGG------TCTCAT-ATGT--GT-AGCT-G-----------A-AA--ATCATCC-TCCATCCTGTAGAACTAG-A-AT-AATTTAC------A-AATTCTTTC--CTGAATATCAACCTT-CAA--------------------TTTAAgc----------------------a--------------g---------------------tagaaag----aa-------------
i Canis_lupus_orion.HG994398.1                            C 0 I 2
s Capra_aegagrus.CM003241.1                                18828739 118 +  46296322 CTCAACT----------GTAG------CCTCAT-ATGT--GT-AGTT-GA----------A-AA--ACCATCC-TTCTTCCTGTTGAACTGG-A-AT-AATTTAC------A-GTTTCTTTC--CGGAATCTCAACCCT-CAA--------------------TTTAAGC----------------------A--------------GTGCAA---------------------CC----AAA-GCA-------T
i Capra_aegagrus.CM003241.1                               C 0 C 0
s Capra_hircus.CM004588.1                                  18059459 118 -  44709034 CTCAACT----------GTAG------CCTCAT-ATGT--GT-AGTT-GA----------A-AA--ACCATCC-TTCTTCCTGTTGAACTGG-A-AT-AATTTAC------A-GTTTCTTTC--CGGAATCTCAACCCT-CAA--------------------TTTAAGC----------------------A--------------GTGCAA---------------------CC----AAA-GCA-------T
i Capra_hircus.CM004588.1                                 C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                      370  64 -     12242 TTCAACT----------GTGA------CCTCCT-GTGT--GT-AGCC-AA---------AA-AA--ACCATCC-TCCTTCCTGTTGAACTAT-A-TT-AAT----------------------------------------------------------------------------------------------------------------------------------------------------------
i Capromys_pilorides.CapPil_scaffold_65020                C 0 I 40
s Carlito_syrichta.NW_007259797.1                            140058 118 -    496798 TTCCACT----------GTGG------CCTCAT-CTGT--GA-GGTT-GC----------C-AACCA---TCC-TCCCTCCTGTTGAACTGG-A-GG-AATTTAC------A-GTTTCTTTC--CTGAATTCCAGTCCT-CAC--------------------TGTAAGC----------------------A-------GTGGAGAA---------------------------C----ACA-GTA-------C
i Carlito_syrichta.NW_007259797.1                         C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                 2272 115 -     11696 CTCAGCT----------GTGG------CCTCGT-ATGT--GT-AGTT-GC----------A-AAGCA---TCA-CTCTGCCTGTTAAACTGG-G-AT-AATTC--------A-GGTTCTTTC--CTGAGTTTCAACTCT-CAA--------------------TTGAAGC----------------------A--------------GTGCAAA---------------------C----AAA-GCA-------T
i Carollia_perspicillata.CarPer_scaffold_92756            C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                     133031 119 +    179628 TTCAACT----------GTGA------CCTCCT-AAGT--GT-AGCT-GC----------A-AA--ACTATCC-TCCTTCCTGTTGAACTGG-A-AT-AAC----TT-AC-A-ATTCCTTTT--CTGAATCTCAGTCCT-CAA--------------------TTTAAGC----------------------A--------------A--CA-------CT--GAA---------C----AAA-GCA-------C
i Castor_canadensis.CasCan_scaffold_2074                  C 0 I 12
s Catagonus_wagneri.CatWag_scaffold_2839                      88075 104 +    217609 CTCAACT----------GTAG------CCTCAT-ATGT--GT-AGTT-GA----------A-AA--ATCACCC-CCTTTCCTTTTGAACTGA-A-AT-AATTTAT------A-GTTTCTTTC--TGGAATTTCAACCCT-CAG--------------------TTTAAGC----------------------A--------------G-----------------------------------------------
i Catagonus_wagneri.CatWag_scaffold_2839                  C 0 I 10
s Cavia_aperea.AVPZ01000300.1                              18346874  63 -  23392119 TTCAACT----------GTGA------CCTCAT-GTGT--GT-AGCT-GC----------A-AA--ACTATCT-TCCTTCCTGTTGAACTGG-A-TT-AAT----------------------------------------------------------------------------------------------------------------------------------------------------------
i Cavia_aperea.AVPZ01000300.1                             C 0 I 39
s Cavia_porcellus.DS562891.1                               18359134  63 -  23407841 TTCAACT----------GTGA------CCTCAT-GTGT--GT-AGCT-GC----------A-AA--ACTATCT-TCCTTCCTGTTGAACTGG-A-TT-AAT----------------------------------------------------------------------------------------------------------------------------------------------------------
i Cavia_porcellus.DS562891.1                              C 0 I 39
s Cavia_tschudii.CavTsc_scaffold_8919                         98009  63 +    143979 TTCAACT----------GTGA------CCTCAT-GTGT--GT-AGCA-GC----------A-AA--ACTATCT-TCCTTCCTGTTAAACTGG-A-TT-AAT----------------------------------------------------------------------------------------------------------------------------------------------------------
i Cavia_tschudii.CavTsc_scaffold_8919                     C 0 I 39
s Cephalopachus_bancanus.k141_2037105                          3954 118 -      8605 TTCCACT----------GTGG------CCTCAT-CTGT--GA-GGTT-GC----------C-CACCA---TCC-TCCCTCCTGTTGAGCTGG-A-GG-AATTTGC------A-GTTTCTTTC--CTGAATTCCAGTCCT-CAC--------------------TGTAagc----------------------a-------gtggagag---------------------------c----aca-gta-------c
i Cephalopachus_bancanus.k141_2037105                     C 0 C 0
s Ceratotherium_simum.JH767749.1                           12227243 116 +  27778364 CTCAACT------------GC------CCTCAT-ATGT--GC-ACTT-GC----------A-AA--ACCATCC-TCCTTCCTGTTGAACTGG-A-GT-AATTTAC------A-GTTTCTTTC--CTGACTTTCAACCCT-CAA--------------------TTTAAGG----------------------A--------------GTGCAAA---------------------C----AAA-GCA-------T
i Ceratotherium_simum.JH767749.1                          C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804           1961 116 -      3715 CTCAACT------------GC------CCTCAT-ATGT--GC-ACTT-GC----------A-AA--ACCATCC-TCCTTCCTGTTGAACTGG-A-GT-AATTTAC------A-GTTTCTTTC--CTGACTTTCAACCCT-CAA--------------------TTTAAGG----------------------A--------------GTGCAAA---------------------C----AAA-GCA-------T
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804      C 0 C 0
s Cercocebus_atys.KQ010504.1                                4469642 110 +   4669795 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AGTGGGGA-------A---------------------------C----AAA-GCA-------C
i Cercocebus_atys.KQ010504.1                              C 0 C 0
s Cercocebus_chrysogaster.k141_393940                          8191 110 -     19203 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Cercocebus_chrysogaster.k141_393940                     C 0 C 0
s Cercocebus_lunulatus.k141_3846941                            2610 110 +      8260 CTCCACC----------ATGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Cercocebus_lunulatus.k141_3846941                       C 0 C 0
s Cercocebus_torquatus.k141_3057011                            2840 110 +     27781 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Cercocebus_torquatus.k141_3057011                       C 0 C 0
s Cercopithecus_ascanius.k141_1024104                          2986 110 -     20310 CTCCACC----------GTGA------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Cercopithecus_ascanius.k141_1024104                     C 0 C 0
s Cercopithecus_cephus.k141_1078548                            5970 110 +     29689 CTCCACC----------GTGG------CCTCAT-ACAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Cercopithecus_cephus.k141_1078548                       C 0 C 0
s Cercopithecus_diana.k141_2427854                              323 110 +      9989 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Cercopithecus_diana.k141_2427854                        C 0 C 0
s Cercopithecus_hamlyni.k141_187466                            8658 110 -     27936 CTCCACC----------GTGG------CCTCAT-ACAT--GT-CGTT-GC----------C-A-------TCC-TCTTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AGTGGGGA-------A---------------------------C----AAA-ACA-------C
i Cercopithecus_hamlyni.k141_187466                       C 0 C 0
s Cercopithecus_lowei.k141_457449                              8677 110 -     11289 CTCCACC----------GTGG------CCTCAT-ACAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Cercopithecus_lowei.k141_457449                         C 0 C 0
s Cercopithecus_albogularis.ctg5                                 38811053 110 +  39242232 CTCCACC----------GTGG------CCTCAT-ACAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Cercopithecus_albogularis.ctg5                                C 0 C 0
s Cercopithecus_mona.ctg39                                 21216744 110 -  21565898 CTCCACC----------GTGG------CCTCAT-ACAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Cercopithecus_mona.ctg39                                C 0 C 0
s Cercopithecus_neglectus.k141_2526306                        33864 110 -     53127 CTCCACC----------GTGG------CCTCAT-ACAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Cercopithecus_neglectus.k141_2526306                    C 0 C 0
s Cercopithecus_nictitans.k141_3278028                         1156 110 +      7159 CTCCACC----------GTGG------CCTCAT-ACAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Cercopithecus_nictitans.k141_3278028                    C 0 C 0
s Cercopithecus_petaurista.k141_807961                         8669 110 -     27947 CTCCACC----------GTGG------CCTCAT-ACAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Cercopithecus_petaurista.k141_807961                    C 0 C 0
s Cercopithecus_pogonias.k141_822820                           8645 110 +     17596 CTCCACC----------GTGG------CCTCAT-ACAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Cercopithecus_pogonias.k141_822820                      C 0 C 0
s Cercopithecus_roloway.k141_3180641                          39139 110 -     41420 CTCCACC----------GTGG------CCTCAT-ACAT--GT-CATT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Cercopithecus_roloway.k141_3180641                      C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060             3884 116 -      6351 CTCAA-------------TGT------CATCAT-AAGT--GC-AGTT-GC----------A-AA--ACCAACC-CCTGTCCTGTTGAACAAG-A-AT-AATTTAT------A-GTTTCTTTC--CTGAATTTCAACCCT-CCA--------------------GTTAAGC----------------------A--------------GGGGA-----------GAA---------C----AAA-GCA-------C
i Chaetophractus_vellerosus.ChaVel_scaffold_229060        C 0 C 0
s Cheirogaleus_major.k141_1490224                             60883 112 +     61209 CTTGACT----------GTGG------CATCAT-ATGT--GT-AGTT-GC---------AA-AACCA---TCC-TCCTTCCTGTGGAACTGG-A-CT-AATTTAT------A-GTTTCTTTC--CTGAATTTCAACCCT-CAA--------------------TTTATGC----------------------A--------------G---------------------------C----AAA-GCA-------C
i Cheirogaleus_major.k141_1490224                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                            11263 112 +     57038 CTTGACT----------GTGG------CATCAT-ATGT--GT-AGTT-GC---------AA-AACCA---TCC-TCCTTCCTGTGGAACTGG-A-AT-AATTTAT------A-GTTTCTTTC--CTGAATTTCAACcct-caa--------------------tttatgc----------------------a--------------g---------------------------c----aaa-gca-------c
i Cheirogaleus_medius.k141_1055463                        C 0 C 0
s Chinchilla_lanigera.JH722012.1                            1247916  61 +   2543920 TTCAACT----------GTGA------CCTCAT-GT----GT-TGCT-GC----------A-AA--ACCATCC-TCTTTCCTGTTGAACTGG-A-TT-AAT----------------------------------------------------------------------------------------------------------------------------------------------------------
i Chinchilla_lanigera.JH722012.1                          C 0 I 40
s Chlorocebus_aethiops.ctg25                               18422608 110 -  18827391 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Chlorocebus_aethiops.ctg25                              C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                         9051 110 -     50209 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Chlorocebus_pygerythrus.k141_1025673                    C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                          135416056 110 + 135778131 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Chlorocebus_sabaeus.CM001947.1                          C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                  14507 120 +     19366 CTCAACT----------GTGT------CCTTAT-AAGC--AC-AGTT-GC----------A-AA--ACCAACCCCCCTTCCTGTTGAACAGG-A-AT-AATTTAT------A-GTTTCTTTC--CTGAATTTCAACAAT-CAA--------------------GTTAAGC----------------------A--------------GTGGA-----------GAA---------C----AAA-GCA-------C
i Choloepus_didactylus.ChoDid_scaffold_45914              C 0 C 0
s Choloepus_hoffmanni.KN194906.1                             169610 120 +    839153 CTCAACT----------GTGT------CCTTAT-AAGC--AC-AGTT-GC----------A-AA--ACCAACCCCCCTTCCTGTTGAACAGG-A-AT-AATTTGT------A-GTTTCTTTC--CTGAATTTCAACAAT-CAA--------------------GTTAAGC----------------------A--------------GTGGA-----------GAA---------C----AAA-GCA-------C
i Choloepus_hoffmanni.KN194906.1                          C 0 C 0
s Colobus_angolensis.KN981557.1                             1904565 124 +   2368649 CTCCACC----------GCGG------CCTCAC-ATAT--GT-CATT-GCTGTCCTCCTTC-A-------TCC-TCCTTCCTGGGGAACCGG-A-AA-GACTGAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAG--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Colobus_angolensis.KN981557.1                           C 0 C 0
s Colobus_guereza.LG01                                    199944183 124 + 200372422 CTCCACC----------ACGG------CCTCAC-ATAT--GT-CGTT-GCCGTCCTCCTTC-A-------TCC-TCCTTCCTGGGGAACCGG-A-AA-GACTGAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAG--------------------TGTAAGC----------------------AATAGGGA-------A---------------------------C----AAA-GCA-------C
i Colobus_guereza.LG01                                    C 0 C 0
s Colobus_polykomos.k141_906115                               31077 124 +     84244 CTCCACC----------GCGG------CCTCAC-ATAT--GT-CGTT-GCCGTCCTCCTTC-A-------TCC-TCCTTCCTGGGGAACCGG-A-AA-GACTGAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAG--------------------TGTAAGC----------------------AATAGGGA-------A---------------------------C----AAA-GCA-------C
i Colobus_polykomos.k141_906115                           C 0 C 0
s Condylura_cristata.JH655891.1                            17545329 133 -  53390261 CTCAACT----------GTGA------CCTCAT-ATGT-G-C-AGTT-GC----------A-AA--ACCATCC-TCCTTCCTGCTGAACTGG-G-AT-AATTTAC------A-GTTTCTTTC--CTGAATTTCAATCTT-CAA--------------------TTTAAGT----------------------a--------------a----------tgcccaaaaaaaaaaaaaagttaaa-gca-------t
i Condylura_cristata.JH655891.1                           C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438            9909 116 -     20389 CTCAACT----------GTGG------ACTCAT-AAGT--GT-AGTT-GC----------A-AA--ACCATCA-TCCTTTTTGTTAAAATAG-A-AC-AATTT--------A-GTTTCTTTC--CTGAATTTCAACCCC-CAA--------------------TTTAAGC----------------------A--------------GTGCAAA---------------------C----AAA-TCA-------T
i Craseonycteris_thonglongyai.CraTho_scaffold_58438       C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                  46245 115 +     63868 GTCAACT----------GTGA------CCTCAT-CTAT--GT-AGAAAGA----------A-AA--ATCATCC-TCCT---TGTTTCCGTGG-A-AT-AAT----T-C---A-TATTCTTTC--CAGAATCTCAACAGA-CAA--------------------TTTAAGC----------------------A--------------A--CAA-------T--GAA---------C----AAA-TCT-------C
i Cricetomys_gambianus.CriGam_scaffold_18520              C 0 C 0
s Cricetulus_griseus.LT883664.1                            11663222 117 + 224834208 ttaaact----------gtga------cctcag-CCAC--AT-AGCA-GC----------A-AA--ATCATCT-TCTTTCCTGTTTCCCTGG-A-AT-AAT----T-C---A-TATTCTTTC--CTGAATTTCAACCCA-CAA--------------------CTTAAGG----------------------G--------------A--CAA-------T--GAA---------C----AAA-GCT-------C
i Cricetulus_griseus.LT883664.1                           I 188 C 0
s Crocidura_indochinensis.CroInd_scaffold_603213                501 120 +      1923 CTCATCT----------GTGA------CCTC---CTGTAAGT-AGCT-GC----------A-AA--ACCACCC-TCCTTCATATTGAACTGT-A-AT-AATTTAC------A-GTTTCTTTG--CTTAATTTCAG-CCT-TAA--------------------TTTAAGC----------------------A--------------GTCCAAAAA------------------CA----AAA-GGA-------G
i Crocidura_indochinensis.CroInd_scaffold_603213          C 0 I 2
s Cryptoprocta_ferox.CryFer_flattened_line_16129              17354 118 -     87169 CTCAACT----------GTGG------CCTCTT-ATGT--CT-AGCT-GC----------A-AA--ATCACCC-TCCTTCCTGTTGGACTGG-A-AT-AATTTAC------A-GATTCCTTT--CTGAATTTCAACCTT-CCA--------------------TTTAAGT----------------------A--------------GTACAAA---------------------C----AAA-GCA-------T
i Cryptoprocta_ferox.CryFer_flattened_line_16129          C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                     834175  62 +   1526836 TTCCACT----------GTGA------CCTCAT-ATGT--AT-ACCT-AC----------A-AA--ACC-TCC-TCCTTCCCATTGAACTGG-A-AT-AAT----------------------------------------------------------------------------------------------------------------------------------------------------------
i Ctenodactylus_gundi.CteGun_scaffold_65                  C 0 I 41
s Ctenomys_sociabilis.CteSoc_scaffold_29687                   34778  63 +     51376 TTCAACT----------GTGA------CCTCAT-GTGT--GC-AGCT-GA----------A-GAGC-C-ATCC-TCCTTCCTGTTGAACTGG-A-TC-AAT----------------------------------------------------------------------------------------------------------------------------------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_29687               C 0 I 40
s Cuniculus_paca.CunPac_flattened_line_231100                  2251  63 +      5455 TTCAACT----------GTGA------CCTCAT-GTGT--GT-AACT-GC----------A-AA--ACCATCC-TCCTTCCTGTTGAACTGG-A-TT-AAT----------------------------------------------------------------------------------------------------------------------------------------------------------
i Cuniculus_paca.CunPac_flattened_line_231100             C 0 I 39
s Dasyprocta_punctata.DasPun_flattened_line_206793              641  63 +      3576 TTCAACT----------GTGA------CCTCAT-GTGT--GT-AGCT-GC----------A-AA--ACCATCC-TCCTTCCTGTTGAACCGG-A-TT-AAT----------------------------------------------------------------------------------------------------------------------------------------------------------
i Dasyprocta_punctata.DasPun_flattened_line_206793        C 0 I 39
s Dasypus_novemcinctus.JH564415.1                             60063 114 +   2246927 CTCAACT----------GTAT------CCTCAT-AAAT--GT-AGTT-GC----------A-AA--ACCACCC-CCTGTCCTGTTGAACAGG-A-AC-AATTTAT------A-GTTTCTTTC--CTGAATTTCAACCCT-CA-------------------------AGA----------------------A--------------GT--AGA---------GAA---------A----AAA-GCA-------T
i Dasypus_novemcinctus.JH564415.1                         C 0 C 0
s Daubentonia_madagascariensis.ctg71                       12532238 112 -  12879189 CTCAACT----------GTGG------CCTCAT-ATGC--GT-AGTT-GC---------AA-AACCA---TCC-TCCTTCCTATGGAACTGG-A-AT-AATTTAC------A-ATTTCTTTC--CTGAATTTCAACCCT-CAA--------------------TTTAAGC----------------------A--------------A---------------------------C----AAA-GCA-------C
i Daubentonia_madagascariensis.ctg71                      C 0 C 0
s Delphinapterus_leucas.KZ290073.1                         16810550 118 +  35494412 CTCAACT----------GTAG------CCTCAT-ATGT--GC-AGTT-GA----------A-AA--ACCATCC-TCCTTCCTGTTGAACTGG-A-AT-AATTTAC------A-ATTTCTTTA--CAGAATTTCAACCCT-CAA--------------------TTTAAGC----------------------A--------------GTGCAA-------T--------------C----AAA-GCA-------T
i Delphinapterus_leucas.KZ290073.1                        C 0 C 0
s Desmodus_rotundus.KZ672289.1                              8627303 115 +  20541912 CTCAGCT----------GTGG------CCTCAT-ATGT--GT-AGTT-GT----------A-AACCA---TCA-CTCTGCCTGTTAAACTGG-A-AT-AATTC--------A-GTTTCTTTC--CTGAATTTCAACTCT-CAA--------------------TTTAAGC----------------------A--------------GTGCAAA---------------------C----AAA-GCA-------T
i Desmodus_rotundus.KZ672289.1                            C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                   668773 118 +   1390856 CTCAACT----------GTGC------CCTCAT-GTGT--GC-ACTT-GC----------A-AA--ACCATCC-TCCTTCCTGTTGAACTGG-A-GT-AATTTAC------A-GTTTCTTTC--CTAACTTTCAACTCT-CAA--------------------TTTAAGC----------------------A--------------GCGCAAA---------------------C----AAA-GCA-------T
i Dicerorhinus_sumatrensis.PEKH010002091.1                C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                     1850 116 +    198055 CTCAACT------------GC------CCTCAT-ATGT--GC-ACTT-GC----------A-AA--ACCATCC-TCCTTCCTGTTGAACTGG-A-GT-AATTTAC------A-GTTTCTTTC--CTGACTTTCAACCCT-CAA--------------------TTTAAGG----------------------A--------------G--CACAAA-------------------C----AAA-GCA-------T
i Diceros_bicornis.DicBicMic_scaffold_5955                C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                     33702  63 +     67921 TTCAACT----------GTGA------CCTCAT-GT--GTGT-AGTT-GC----------A-AA--ACCATCC-TCTTTCCTGCTGAACTGG-A-TT-AAT----------------------------------------------------------------------------------------------------------------------------------------------------------
i Dinomys_branickii.DinBra_scaffold_21862                 C 0 I 40
s Dipodomys_ordii.KN672350.1                               18895078 102 +  37912305 TTCAACT----------GTGA------CTTCAT-ATGT--GTTAGCA-GC----------A-AA--ACAATCT-TCCTTCCTGATGAAGTAG-A-AT-CAT----TTCAC-AGGTTT-TTTCCCCTCAGTTTGAATTCT-CAG--------------------TTA-----------------------------------------------------------------------------------------
i Dipodomys_ordii.KN672350.1                              C 0 I 112
s Dipodomys_stephensi.DipSte_scaffold_75855                   11262 103 +     14536 TTCAACT----------GTAA------CTTCAT-ATGT--GTTAGCA-GC----------A-AA--ACCATCT-TCCTTCCTGATGAACTAG-A-AT-CAT----TTCAC-AGGTTTTTTTCCCCTCAGTTTGAATTCT-CAG--------------------TTA-----------------------------------------------------------------------------------------
i Dipodomys_stephensi.DipSte_scaffold_75855               C 0 I 123
s Dolichotis_patagonum.DolPat_scaffold_30833                  30896  63 -     42551 TTCAACT----------GTGA------CCTCAT-GTGT--GT-AGCT-GC----------A-AA--ACTATCC-TCCTTCCTGTTGAACTGG-A-TT-AAT----------------------------------------------------------------------------------------------------------------------------------------------------------
i Dolichotis_patagonum.DolPat_scaffold_30833              C 0 I 39
s Eidolon_helvum.KE759718.1                                    6811 116 +     11740 CTCAACT----------GTGG------GCTCAT-ATGT--GT-AGTT-GC----------A-AA--ACCATCA-TCCTTCCTGTTAAACTGG-A-AT-AATTT--------A-GTTTCATTC--CTGAATTTCAACCCT-CAA--------------------TTTAAGC----------------------A--------------GTG----------T-A-AA---------C----AAA-ACA-------t
i Eidolon_helvum.KE759718.1                               C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                        309746 118 +    607251 CTCAACT----------GTAG------CCTCAT-ATGT--AT-AGTT-GA----------A-AA--ACCATCC-TTCTTCCTGTTGAACTGG-A-AT-AATTTAC------A-GTTTCTTTC--CGGAATTTCAACCTT-CAA--------------------TGTAAGC----------------------A--------------ATGCAA-------T--------------C----AAA-GCA-------T
i Elaphurus_davidianus.JRFZ01104969.1                     C 0 C 0
s Elephantulus_edwardii.JH947257.1                          1088420  79 +  10337057 ----------------------------------------GT-AGTC-GA----------A-AGCC----TCC-TCCTTCTTGCTGCACAGG-A-AT-AATTTACAGC-T-A-GTTTCTTTC--CTAAATATTAACCTT-CAA--------------------GCT-----------------------------------------------------------------------------------------
i Elephantulus_edwardii.JH947257.1                        I 9 I 16
s Ellobius_lutescens.LOEQ01008920.1                           12033 116 -    110024 TTTGGCT----------ATAA------CCTCAT-ATA---GT-AGCA-GC----------A-AA--ATCATCC-TTCTTCATGTTTTCCTGA-A-AG-AAT----T-C---A-GATTCTATC--CTGAACTTAAACCTA-TAA--------------------TTTAAGG----------------------A--------------A--CAA-------T--GA---------GC----AAA-ATT-------C
i Ellobius_lutescens.LOEQ01008920.1                       I 206 C 0
s Ellobius_talpinus.LOJH01123422.1                             2983 116 +      5358 TTTAGCT----------ATAA------CCTCAT-ATA---GT-AGCA-GC----------A-AA--ATCATCC-TTCTTCATGTTTCCCTGA-A-AG-AAT----T-C---A-GATTCTCTC--CTGAACTTAAACCTA-TAA--------------------TTTAAGG----------------------A--------------A--CAA-------T--GA---------GT----AAA-ATT-------C
i Ellobius_talpinus.LOJH01123422.1                        I 200 C 0
s Enhydra_lutris.KZ291758.1                                16325163 118 -  41312741 CTTCACT----------GTGG------TCTCAT-ATGT--GC-AGCA-GC----------A-AA--ATCATCC-TCCTTCCTGTTGAACTGT-A-AT-AATTTAC------A-CATTCTTTC--CTGAATTTCAACCTT-CAA--------------------TTGAAGC----------------------A--------------GTACAAA---------------------C----AAA-GCA-------T
i Enhydra_lutris.KZ291758.1                               C 0 C 0
s Eptesicus_fuscus.JH977646.1                               2143160 116 -  14770903 CTCAACT----------GTGG------CCTCAG-ATGT--GT-AGTT-GC----------A-A--GACCATCA-TTCTGCCTGTGCAACTGG-A-AT-AATTT--------C-GTTTCTTTC--CTGAATCTCGTCCCT-CCA--------------------TGCAAGC----------------------A--------------GTGCAAA---------------------C----AAA-GGA-------T
i Eptesicus_fuscus.JH977646.1                             C 0 C 0
s Equus_asinus.JREZ01000139.1                               1279112 118 +   4378816 CTCAACT----------GTGG------CCTCGC-ATGT--GT-ACTT-GC----------A-AA--ACCATCC-TCCTTCCTGTGGAACTGC-A-AT-AATTTAC------A-GTTTCTTTC--CTGAATTTCAACCCT-CAA--------------------TTTAAGC----------------------A--------------GTGCAAA---------------------C----AAA-GCA-------T
i Equus_asinus.JREZ01000139.1                             C 0 C 0
s Equus_caballus.CM000403.2                                18526933 118 -  39960074 CTCAACT----------GTGG------CCTCGC-GTGT--GT-ACTT-GC----------A-AA--ACCATCC-TCCTTCCTGTGGAACTGA-A-AT-AATTTAC------A-GTTTCTTTC--CTGAATTTCAACCCT-CAA--------------------TTTAAGC----------------------A--------------GTGCAAA---------------------C----AAA-GCA-------T
i Equus_caballus.CM000403.2                               C 0 C 0
s Equus_przewalskii.KK951119.1                                28948 118 +    498745 CTCAACT----------GTGG------CCTCGC-GTGT--GT-ACTT-GC----------A-AA--ACCATCC-TCCTTCCTGTGGAACTGA-A-AT-AATTTAC------A-GTTTCTTTC--CTGAATTTCAACCCT-CAA--------------------TTTAAGC----------------------A--------------GTGCAAA---------------------C----AAA-GCA-------T
i Equus_przewalskii.KK951119.1                            C 0 C 0
s Erinaceus_europaeus.JH835339.1                            3320141 122 -   7059049 CTCAACT----------GTGA------CCTCAG-AC--ATGT-AGTT-AC----------A-AA--ACCATCC-TCCTTCCTGTTTGACTGG-A-gt-aatttac------a-ctcccaccc-cCTGTATTTCAGACCT-CAA--------------------TTTaagc----------------------a--------------g------------------aacaaaaaaa----aaa-aaa-------a
i Erinaceus_europaeus.JH835339.1                          C 0 C 0
s Erythrocebus_patas.Contig38                              21199291 110 -  21539334 CTCCACC----------ATGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTTTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Erythrocebus_patas.Contig38                             C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968            10226 118 +    133382 CTCAACT----------GTAG------CCTCAT-ATGT--GT-AGTT-GA----------A-AA--ACCATCC-TCCTTCCTGTTGAACTGG-A-AT-AATTTAC------A-ATTTCTTTC--CAGAATTTCAACCCT-CAA--------------------TTTAAGC----------------------A--------------GTGCAA-------T--------------C----AAA-GCA-------T
i Eschrichtius_robustus.EscRob_flattened_line_8968        C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514              24164 118 -     44125 CTCAACT----------GTAG------CCTCAT-ATGT--GT-AGTT-GA----------A-AA--ACCATCC-TCCTTCCTGTTGAACTGG-A-AT-AATTTAC------A-ATTTCTTTC--CAGAATTTCAACCCT-CAA--------------------TTTAAGC----------------------A--------------GTGCAA-------T--------------C----AAA-GCA-------T
i Eubalaena_japonica.EubJap_flattened_line_31514          C 0 C 0
s Eulemur_albifrons.k141_342033                                9248 112 -     14127 CTTGACT----------GTGG------CCTCTT-ATGT--GT-ACTT-GC---------AA-AACCA---TCC-TCCTTCCTGTGGAACTGG-A-AT-AATTTAC------A-GTTTCTTTC--CTGAATTTCAACCTT-CAG--------------------TTTATGC----------------------A--------------G---------------------------C----AAA-GCA-------C
i Eulemur_albifrons.k141_342033                           C 0 C 0
s Eulemur_collaris.k141_377015                                 1938 112 -     16928 CTTGACT----------GTGG------CCTCTT-ATGT--GT-ACTT-GC---------AA-AACCA---TCC-TCCTTCCTGTGGAACTGG-A-AT-AATTTAC------A-GTTTCTTTC--CTGAATTTCAACCTT-CAG--------------------TTTATGC----------------------A--------------G---------------------------C----AAA-GCA-------C
i Eulemur_collaris.k141_377015                            C 0 C 0
s Eulemur_coronatus.k141_885031                               10969 112 -     25546 CTTGACT----------GTGG------TCTCAT-ATGT--GT-ACTT-GC---------AA-AACCA---TCC-TCCTTCCTGTGGAACTGG-A-AT-AATTTAC------A-GTTTCTTTC--CTGAATTTCAACCCT-CAA--------------------TTTATGC----------------------A--------------G---------------------------C----AAA-GCA-------C
i Eulemur_coronatus.k141_885031                           C 0 C 0
s Eulemur_flavifrons.k141_1184614                              8156 112 +     26330 CTTGACT----------GTGG------CCTCAT-ATGT--GT-ACTT-GC---------AA-AACCA---TCC-TCCTTCCTGTGGAACTGG-A-AT-AATTTAC------A-GTTTCTTTC--CTGAATTTCAACCCT-CAG--------------------TTTATGC----------------------A--------------G---------------------------C----AAA-GCA-------C
i Eulemur_flavifrons.k141_1184614                         C 0 C 0
s Eulemur_fulvus.k141_544389                                   9413 112 +     23973 CTTGACT----------GTGG------CCTCTT-ATGT--GT-ACTT-GC---------AA-AACCA---TCC-TCTTTCCTGTGGAACTGG-A-AT-AATTTAC------A-GTTTCTTTC--CTGAATTTCAACCCT-CAG--------------------TTTATGC----------------------A--------------G---------------------------C----AAA-GCA-------C
i Eulemur_fulvus.k141_544389                              C 0 C 0
s Eulemur_macaco.k141_1562045                                  8160 112 +     75513 CTTGACT----------GTGG------CCTCAT-ATGT--GT-ACTT-GC---------AA-AACCA---TCC-TCCTTCCTGTGGAACTGG-A-AT-AATTTAC------A-GTTTCTTTC--CTGAATTTCAACCCT-CAG--------------------TTTATGC----------------------A--------------G---------------------------C----AAA-GCA-------C
i Eulemur_macaco.k141_1562045                             C 0 C 0
s Eulemur_mongoz.k141_232305                                   6108 112 +     97555 CTTGACT----------GTGG------CCTCAT-ATGT--GT-ACTT-GC---------AA-AACCA---TCC-TCCTTCCTGTGGAACTGG-A-AT-AATTTAC------A-GTTTCCTTC--CTGAATTTCAACCCT-CAG--------------------TTTATGC----------------------A--------------G---------------------------C----AAA-GCA-------C
i Eulemur_mongoz.k141_232305                              C 0 C 0
s Eulemur_rubriventer.k141_571033                              9042 112 +     26496 CTTGACT----------GTGG------CCTCAT-ATGT--GT-ACTT-GC---------AA-AACCA---TCC-TCCTTCCTGTGGAACTGG-A-AT-AATTTAC------A-GTTTCTTTC--CTGAATTTCAACCCT-CAG--------------------TTTATGC----------------------A--------------G---------------------------C----AAA-GCA-------C
i Eulemur_rubriventer.k141_571033                         C 0 C 0
s Eulemur_rufus.k141_2367191                                   2047 112 +      2552 CTTGACT----------GTGG------CCTCTT-ATGT--GT-GCTT-GC---------AA-AACCA---TCC-TCCTTCCTGTGGAACTGG-A-AT-AATTTAC------A-GTTTCTTTC--CTGAATTTCAACCTT-CAG--------------------TTTATGC----------------------A--------------G---------------------------C----AAA-GCA-------C
i Eulemur_rufus.k141_2367191                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                                9215 112 +    111500 CTTGACT----------GTGG------CCTCAT-ATGT--GT-ACTT-GC---------AA-AACCA---TCC-TCCTTCCTGTGGAACTGG-A-AT-AATTTAC------A-GTTTCTTTC--CTGAATTTCAACCCT-CAG--------------------TTTATGC----------------------A--------------G---------------------------C----AAA-GCA-------C
i Eulemur_sanfordi.k141_1122526                           C 0 C 0
s Felis_catus.KN305074.1                                          5 118 -      2052 CTCAACT----------GTGG------CCTCAT-ATGT--AT-AGCC-GC----------A-AA--ACTACCC-TCCTTTCTTTTGAACTGG-A-AT-AATTTAC------A-GATTCTTTC--CAGAATTTCAACCTT-CAA--------------------TTTAAGT----------------------A--------------GTACAAA---------------------G----AAA-ACA-------A
i Felis_catus.KN305074.1                                  n 7188 C 0
s Felis_catus_fca126.CM031415.1                            20184771 118 + 205367284 CTCAACT----------GTGG------CCTCAT-ATGT--AT-AGCC-GC----------A-AA--ACTACCC-TCCTTTCTTTTGAACTGG-A-AT-AATTTAC------A-GATTCTTTC--CAGAATTTCAACCTT-CAA--------------------TTTAAGT----------------------A--------------GTACAAA---------------------G----AAA-ACA-------A
i Felis_catus_fca126.CM031415.1                           C 0 C 0
s Felis_nigripes.FelNig_flattened_line_125938                  9885 118 -     11347 CTCAACT----------GTGG------CCTCAT-ATGT--AT-AGCC-GC----------A-AA--ACTACCC-TCCTTTCTTTTGAACTGG-A-AT-AATTTAC------A-GATTCTTTC--CAGAATTTCAACCTT-CAA--------------------TTTAAGT----------------------A--------------GTACAAA---------------------G----AAA-ACA-------A
i Felis_nigripes.FelNig_flattened_line_125938             C 0 C 0
s Fukomys_damarensis.KN121974.1                              847981  42 +   3816255 -----------------------------------------------------------------------------------------------------------------------------TGAATATCCGCCTT-TGG--------------------TTT-AGT----------------------A--------------ATG-A--------T--GAA---T----GA----AAA-ACT-------C
i Fukomys_damarensis.KN121974.1                           I 61 C 0
s Galagoides_demidoff.k141_31856                               2029 112 -      3432 CTTAACT----------GTGG------CCTCAC-ATGT--GT-ACTT-AC---------AA-AAC-A--AACC-TCCTTCCTGTGGAACTAG-A-AT-AACTTAC------A-GTTTCTTTC--CTGAATTCCAACCct-cgg--------------------tttaagt----------------------a--------------a---------------------------a----aaa-gca-------c
i Galagoides_demidoff.k141_31856                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069                24817 118 +     26054 CTCAACT----------GTGG------CCTCAT-GTGT--GT-AGTT--C----------A-AA--ACCATCC-TCTTTCCTGTTGAACTGG-A-AT-AATTCAC------A-GTTTCTTTC--CTAAACTTCAACCTT-CAA--------------------TTTAAGC----------------------A--------------ATGGA-----------GAA---------C----AAA-GCA-------C
i Galeopterus_variegatus.GalVar_scaffold_56069            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                      608250 118 -    660261 TTCAACT----------GTGG------CCTCAT-ATGT--GT-AGTT-GA----------A-AA--ACCATCC-TTCTTCCTGTTGAACTGG-A-AT-AATTTAC------A-GTTTCTTTC--CGGAATTTCAACCCT-CAA--------------------TTTAAGC----------------------A--------------GTGCAA-------T--------------C----AAA-GCA-------T
i Giraffa_tippelskirchi.LVKQ01S007888.1                   C 0 C 0
s Glis_glis.GliGli_scaffold_19807                             29654 120 +     49224 TTCAACT----------GTGA------CCTCAT-CTGT--GT-AGCT-GC----------A-AA--ACCATCC-TCCTTCCTGTTGAACTGG-AAAT-AAT----TT-AC-A-GTTTCTTTC--CTGAATCCCAACCTT-Caa--------------------ttgaagc----------------------a--------------a--------------------tgatgagc----aaa-aca-------c
i Glis_glis.GliGli_scaffold_19807                         C 0 C 0
s Gorilla_beringei.k141_2022027                                 844 114 +      3305 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------T-A-------TTC-TCGTTCCTGTGGAACTGG-A-AA-GATTTAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AGTGGGAA-------A---------------------------C----AAA-GCA-------C
i Gorilla_beringei.k141_2022027                           I 43 I 77
s Gorilla_gorilla.LT578341.1                              186331787 114 + 186649187 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TTC-TAGTTCCTGTGGAACTGG-A-AA-GATTTAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AGTGGGAA-------A---------------------------C----AAA-GCA-------C
i Gorilla_gorilla.LT578341.1                              C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    29465 116 +     78134 TTCAACT----------GTGA------CCT----CTGT--GT-AGCT-GC----------A-AA--ACCATCC-TCCTTCCTGTTGAACTGG-A-AT-AAT----TT-AC-C-TTTTCTTTC--CCGAATCTCAACCCT-CAA--------------------TTTAAGC----------------------A--------------AT-TA--------T--GA---------GC----TAA-ACC-------T
i Graphiurus_murinus.GraMur_scaffold_10447                C 0 C 0
s Hapalemur_alaotrensis.k141_170648                            2296 112 -     19426 CTTGACT----------GTGG------CCTCAT-ATGT--GT-AGTT-GC---------AA-AACCA---TCC-TCCTTCTTGTGGAACTGG-A-AT-AATTTAC------A-GTTTCTTTC--CTGAATTTCAACCCT-CAA--------------------TTTGTGC----------------------A--------------G---------------------------C----AAA-GCA-------C
i Hapalemur_alaotrensis.k141_170648                       C 0 C 0
s Hapalemur_gilberti.k141_488810                               7442 112 -     15286 CTTGACT----------GTGG------CCTCAT-ATGT--GT-AGTT-GC---------AA-AACCA---TCC-TCCTTCTTGTGGAACTGG-A-AT-AATTTAC------A-GTTTCTTTC--CTGAATTTCAACCCT-CAA--------------------TTTGTGC----------------------A--------------G---------------------------C----AAA-GCA-------C
i Hapalemur_gilberti.k141_488810                          C 0 C 0
s Hapalemur_griseus.k141_1511508                               9061 112 +     18253 CTTGACT----------GTGG------CCTCAT-ATGT--GT-AGTT-GC---------AA-AACCA---TTC-TCCTTCTTGTGGAACTGG-A-AT-GATTTAC------A-GTTTCTTTC--CTGAATTTCAACCCT-CAA--------------------TTTGTGC----------------------A--------------G---------------------------C----AAA-GCA-------C
i Hapalemur_griseus.k141_1511508                          C 0 C 0
s Hapalemur_meridionalis.k141_248335                           9183 112 -     41752 CTTGACT----------GTGG------CCTCAT-ATGT--GT-AGTT-GC---------AA-AACCA---TCC-TCCTTCTTGTGGAACTGG-A-AT-AATTTAC------A-GTTTTTTTC--CTGAATTTCAACCCT-CAA--------------------TTTGTGC----------------------A--------------G---------------------------C----AAA-GCA-------C
i Hapalemur_meridionalis.k141_248335                      C 0 C 0
s Hapalemur_occidentalis.k141_907772                           9005 112 -     16460 CTTGACT----------GTGG------CCTCAT-ATGT--GT-AGTT-GC---------AA-AACCA---TCC-TCCTTCTTGTGGAACTGG-A-AT-GATTTAC------A-GTTTCTTTC--CTGAATTTCAACCCT-CAA--------------------TTTGTGC----------------------A--------------G---------------------------C----AAA-GCA-------C
i Hapalemur_occidentalis.k141_907772                      C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                230537 118 +    327341 CTCAACT----------GTGG------CCTCAT-ATGT--CT-AGCT-GC----------A-AA--ATCACCC-TCCTTCCTGTTGGACTGG-A-AT-AATTTAT------A-GATTCCTTC--CTGAATTTCAACCTT-CCA--------------------TTTAAGT----------------------A--------------GTACAAA---------------------C----AAA-GCA-------T
i Helogale_parvula.HelPar_flattened_line_2585             C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                  16944 118 +     36099 CTCAACT----------GTAG------CCTCAT-ATGT--GT-AGCT-GA----------A-AA--ACCATCC-TTCTTCCTGTTGAACTGG-A-AT-AATTTAC------A-GTTTCTTTC--TGGAATCTCAACCCT-CAA--------------------TTTAAGC----------------------A--------------GTGCAA-------T--------------C----AAA-GCA-------T
i Hemitragus_hylocrius.HemHyl_scaffold_45859              C 0 C 0
s Heterocephalus_glaber.JH602082.1                         20658874  40 +  22651954 -----------------------------------------------------------------------------------------------------------------------------CGAATGTCCACCTT-TGA--------------------TTT-AGT----------------------A--------------ATGC---------T-A-AA---------C----AAA-GCA-------C
i Heterocephalus_glaber.JH602082.1                        I 41 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_177355                 2586 118 -      3210 CTCTTTT----------GCAC------CTTCAT-GTGT--GT-AGTG-GA----------A-AA--AGCATCC-TCTTTCCTGTTGAACAGG-A-AT-AATTTAC-AGTG-A-GTCTCTTTC--TTGGATTTCAACCCT-CA-------------------------AGC----------------------A--------------CTGCA-----------GA---------GC----AAA-GCA-------C
i Heterohyrax_brucei.HetBruBak_scaffold_177355            I 171 I 299
s Hippopotamus_amphibius.HipAmp_scaffold_9076                111395 118 +    128679 CTCAACT----------GTAG------CCTCGT-ATGT--GT-AGTT-GA----------A-AA--ACCATCC-TCCTTCCTGTTGAACTGG-A-AT-AATTTAC------A-ATGTCTTTC--TGGAATTTCAACCCT-CAA--------------------TTTAAGC----------------------A--------------GTGCAA-------T--------------C----AAA-GCA-------T
i Hippopotamus_amphibius.HipAmp_scaffold_9076             C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                        107780 116 +   1711038 CTCAACT----------GTGG------CCTCAT-ATGT--GT-AATT-GC----------A-AA--ACCATCA-TCCTTCCTGTGAAACCGG-A-AT-AATTA--------A-GCTTCTTTC--CTGAATTTCAACCCT-CCA--------------------TTTAAGC----------------------T--------------GTGCAAA---------------------C----AAA-TCA-------T
i Hipposideros_armiger.JXIK01000431.1                     C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171                39220 115 +     43066 CTCAACT----------GTGG------CCTCAC-ATGT--GT-AATT-GC----------A-AA--ACCATCA-TCCTTCCTGT-AAACTGG-A-AT-AATTA--------A-GCTTCTTTC--CTGAATTTCAACCCT-CCA--------------------TTTAAGT----------------------T--------------GTGCAAA---------------------C----AAA-TCA-------T
i Hipposideros_galeritus.HipGal_scaffold_29171            C 0 C 0
s Hoolock_leuconedys.ctg274                                     428621 114 +    630532 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CATT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-GGTTTAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AGTGGGGA-------A---------------------------C----AAA-GCA-------C
i Hoolock_leuconedys.ctg274                                  C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                   32631 118 +     55795 CTCAACT----------GTGG------CCTCAT-ATGG--CT-AGCT-GC----------A-AA--ATCACCC-TCCTTCCTGTTGAACTGG-A-AT-AATTTAC------G-GATTCCTTC--CTGAATTTCAACCTT-CCA--------------------TTAAGGT----------------------A--------------GTACAAA---------------------C----AAA-GCA-------A
i Hyaena_hyaena.HyaHya_flattened_line_26932               C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117             19255  62 -    143317 TTCAACT----------GTGA------CCTCAT-GTGT--GT-AGTT-GC----------A-AACCA---TCT-TCCTTCCTGTTAAACTGG-A-TT-AAT----------------------------------------------------------------------------------------------------------------------------------------------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117         C 0 I 39
s Hylobates_agilis.k141_307679                                11539 114 -     15490 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-GGTTTAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AGTGGGGA-------A---------------------------C----AAA-GCA-------C
i Hylobates_agilis.k141_307679                            C 0 C 0
s Hylobates_klossii.k141_282416                               53544 114 +     67168 CTCCACC----------ATGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-GGTTTAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AGTGGGGA-------A---------------------------C----AAA-GCA-------C
i Hylobates_klossii.k141_282416                           C 0 C 0
s Hylobates_pileatus_b.LG02                                      189536988 114 - 191637585 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-GGTTTAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AGTGGGGA-------A---------------------------C----AAA-GCA-------C
i Hylobates_pileatus_b.LG02                                      C 0 C 0
s Hylobates_pileatus_a.tarseq_633                             3330087 114 -  11177569 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-GGTTTAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AGTGGGGA-------A---------------------------C----AAA-GCA-------C
i Hylobates_pileatus_a.tarseq_633                           C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       80330  61 +    135385 TTCAACT----------GTGA------CCTCAT-GC----GT-AGCT-GC----------A-AA--ACCGCCC-TCCTTTCTGCCGAACTGC-A-CT-AAT----------------------------------------------------------------------------------------------------------------------------------------------------------
i Hystrix_cristata.HysCri_scaffold_5660                   C 0 I 41
s Ictidomys_tridecemlineatus.JH393364.1                     7513881 119 -   7955117 TTCAACT----------GTGA------CCTCAT-CTGT--GT-AGCT-GC----------A-AA--ACCTTCC-TCCTTCTTGTTGAGCTGG-A-AT-AAT----TT-AC-A-GTTTCTTTC--CTGAATTTCAACCCT-CAA--------------------TTTAAGC----------------------A--------------GTG-A--------T--GAA---------C----AAA-ACA-------G
i Ictidomys_tridecemlineatus.JH393364.1                   C 0 C 0
s Indri_indri.k141_3655594                                    17410 112 +     31101 CTTGACT----------GTGG------CCTCAT-ATGT--GT-AGCT-GC---------AA-AACCA---TCC-TCCTTCCTGTGGAACTGG-A-AT-AATTTAC------A-ATTTCTTTC--CTGCATTTCAACCCT-CAA--------------------TTTATGC----------------------A--------------G---------------------------C----AAA-GCA-------G
i Indri_indri.k141_3655594                                C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101                21767 118 +     23964 CTCAACT----------GTAG------CCTCAT-ATGT--GT-AGTG-GA----------A-AA--ACCATCC-TCCTTCCTGTTGAACTGG-A-AT-AATTTAC------A-ATTTCTTTA--CAGAATTTCAACCCT-CAT--------------------TTTAAGC----------------------A--------------GTGCAA-------T--------------C----AAA-GCA-------T
i Inia_geoffrensis.IniGeo_flattened_line_48101            C 0 C 0
s Jaculus_jaculus.JH725527.1                                8270731  77 -   9596543 -----------------------------------------------------------------------------TTCCTGTAGCTCTGG-A-AT-AAT----TT-AG-A-GTTCCTTTC--TTGAATTTCAGCCCT-CAA--------------------CTCAAAC----------------------A--------------GT-----------T-A------TAAA--C----AAA-GTA-------C
i Jaculus_jaculus.JH725527.1                              I 26 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                 1034 118 -      3359 CTCAACT----------GTAG------CCTCAT-ATGT--GT-AGTT-GA----------A-AA--ACCATCC-TCCTTCCTGTTGAACTGG-A-AT-AATTTAC------A-ATTTCTTTA--CAGAATTTCAAATCT-CAA--------------------TTTAAGC----------------------A--------------GTGCAA-------T--------------C----AAA-GCA-------T
i Kogia_breviceps.KogBre_flattened_line_192630            C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                     11291 116 -     42476 CTCGACT----------GCGG------CCTCGG-AGGT--GT-AGTT-GC----------A-A--GACCATCC-TTCTGCCTGGGAAACTGG-A-AT-AATCT--------C-GCTTCTTTC--CCGAATCTCCTCCCT-CCG--------------------TGCAAGC----------------------C--------------GTGCAAA---------------------C----AAA-CCA-------T
i Lasiurus_borealis.LasBor_scaffold_32767                 C 0 C 0
s Lemur_catta.scaffold_24                                  15519542 112 -  30322482 CTTGACT----------GTGG------CCTCAT-ATGT--GT-AGTT-GC---------AA-AGCCA---TCC-TCCTTCTTGTGGAACTGG-A-AT-AATTTAC------A-GTTTCTTTC--CTGAATTTCAACCCT-CAA--------------------TTTGTGC----------------------A--------------G---------------------------C----AAA-GCA-------C
i Lemur_catta.scaffold_24                                 C 0 C 0
s Lepilemur_ankaranensis.k141_596936                           6052 112 -     23766 CTTGACT----------GTGG------CCTCAT-ATGT--GT-AGTT-CC---------AA-AACCA---TCC-TCCTTCTTGTGGAACTGG-A-AT-AATTTAC------A-ATTTCTTTC--CTGAATTTCAACCCT-caa--------------------tttatgc----------------------a--------------g---------------------------a----aaa-gca-------c
i Lepilemur_ankaranensis.k141_596936                      C 0 C 0
s Lepilemur_dorsalis.k141_577674                              24015 112 +     45836 CTTGACT----------GTGG------CCTCAT-ATGT--GT-AGTT-CC---------AA-AACCA---TCC-TCCTTCTTGTGGAACTGG-A-AT-AATTTAC------A-ATTTCTTTC--CTGAATTTCAAccct-caa--------------------tttatgc----------------------a--------------g---------------------------a----aaa-gca-------c
i Lepilemur_dorsalis.k141_577674                          C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                          30905 112 -     32627 CTTGACT----------GTGG------CCTCAT-ATGT--GT-AGTT-GC---------AA-AACC---GTCC-TCCTTCCTGTGGAACTGG-A-AT-AATTTAC------A-ATTTCTTTC--CTGAATTTCAACCCT-CAA--------------------TTTATGc----------------------a--------------g---------------------------a----aaa-gca-------c
i Lepilemur_ruficaudatus.k141_420445                      C 0 C 0
s Lepilemur_septentrionalis.k141_185316                       22105 112 +     54090 CTTGACT----------GTGG------CCTCAT-ATGT--GT-AGTT-CC---------AA-AACCA---TCC-TCCTTCTTGTGGAACTGG-A-AT-AATTTAC------A-ATTTCTTTC--CTGAATTTCAACCCT-CAA--------------------TTTATGC----------------------A--------------G---------------------------A----AAA-GCA-------C
i Lepilemur_septentrionalis.k141_185316                   C 0 C 0
s Leptonychotes_weddellii.APMU01165359.1                       1331 118 -      1663 CTCCACT----------GTGG------CCTCAT-AAGT--GT-AGCT-GC----------A-AA--ATCATCC-TCTTTCCTGTTGAATTGG-A-AC-AATTTAC------A-GATTCTTCC--CTGAATTTCAACCTT-CAA--------------------TTTGAGC----------------------A--------------GTACAAA---------------------C----AAA-ACA-------T
i Leptonychotes_weddellii.APMU01165359.1                  C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                      2974 116 -     14121 CTCAACT----------GTGG------CCTC-T-TCAT--GG-AGCT-GC----------A-AA--ACCATCC-TCCCTCCTGTTGAATAGG-A-AT-AATTTAC------A-GTTGTTTTC--CTGAAT-TTAACCCA-CAA--------------------TTTAAGC----------------------A--------------AT-----------T-A-AAA--------C----AAA-GCA-------C
i Lepus_americanus.LepAme_scaffold_107385                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                              266848 118 -    662738 CTCAACT----------GTAG------CCTCAT-ATGT--GT-AGTT-GA----------A-AA--ACCATCC-TCCTTCCTGTTGAACTGG-A-AT-AATTTAC------A-ATTTCTTTA--CAGAATTTCAACCCT-CAA--------------------TTTAAGC----------------------A--------------GTGCAA-------T--------------C----AAA-GCA-------T
i Lipotes_vexillifer.KE559953.1                           C 0 C 0
s Lophocebus_aterrimus.ctg367                               1430808 110 +   1826925 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Lophocebus_aterrimus.ctg367                             C 0 C 0
s Loxodonta_africana.GL010049.1                             4213844 123 -  43346337 CTTTTCT----------ATAG------CCTCAC-ATGT--GT-AGTT-GA----------A-AA--ATCACCC-TCCTTCCTGTTGAACAGG-A-AT-AATTTAC-AGTT-A-GTCTCTTTC--CTGGGTTTCATCCTT-CAA--------------------GTTAAGC----------------------A--------------GT--AGA---------GAA---------C----AAA-GCA-------G
i Loxodonta_africana.GL010049.1                           C 0 C 0
s Lycaon_pictus.CM007581.1                                 17951048 117 -  59628241 CTCCACT----------GTGG------CCTCAT-ATGT--GT-AGCT-G-----------A-AA--ATCATCC-TCCATCCTGTAGAACTAG-A-AT-AATTTAC------A-AATTCTTTC--CTGAATATCAACCTT-CAA--------------------TTTAAGC----------------------A--------------GTACAAA---------------------C----AAA-GCA-------T
i Lycaon_pictus.CM007581.1                                C 0 C 0
s Macaca_arctoides.k141_2326796                                 997 110 +     40492 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Macaca_arctoides.k141_2326796                           I 5 C 0
s Macaca_assamensis.Contig5                                59670257 110 +  60120075 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Macaca_assamensis.Contig5                               I 5 C 0
s Macaca_cyclopis.k119_18836                                   6755 110 -     26193 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Macaca_cyclopis.k119_18836                              I 5 C 0
s Macaca_fascicularis.k141_814140                             74546 110 -    114318 CTCCACT----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Macaca_fascicularis.k141_814140                         I 5 C 0
s Macaca_fuscata.k119_255327                                    268 110 -     23192 CTCCACC----------GTGG------CCTCAT-GTAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Macaca_fuscata.k119_255327                              I 5 C 0
s Macaca_leonina.k141_3550399                                  9717 110 -     29190 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Macaca_leonina.k141_3550399                             I 5 C 0
s Macaca_maura.k141_2733130                                   18288 110 +     37952 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Macaca_maura.k141_2733130                               I 5 C 0
s Macaca_mulatta.NC_041758.1                              186833376 110 + 187317192 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Macaca_mulatta.NC_041758.1                              I 5 C 0
s Macaca_nemestrina.KQ007038.1                             25451934 110 -  25927173 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Macaca_nemestrina.KQ007038.1                            I 5 C 0
s Macaca_nigra.k141_1655396                                   74137 110 +     89720 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Macaca_nigra.k141_1655396                               I 5 C 0
s Macaca_radiata.k141_3680011                                  1134 110 +     20474 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Macaca_radiata.k141_3680011                             I 5 C 0
s Macaca_siberu.k141_635500                                     935 110 -     14993 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Macaca_siberu.k141_635500                               I 5 C 0
s Macaca_silenus.Contig273                                   323567 110 -    668171 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Macaca_silenus.Contig273                                I 5 C 0
s Macaca_thibetana.k99_7456                                   15077 110 -     15935 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------ACTGGGGA-------A---------------------------C----AAA-GCA-------C
i Macaca_thibetana.k99_7456                               I 5 C 0
s Macaca_tonkeana.k141_1498238                                19873 110 -     45290 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Macaca_tonkeana.k141_1498238                            I 5 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                  86952 115 +     94391 CTCAACT----------GTGG------GCTCAT-TTGT--GT-AGTT-GC----------A-AA--ACCATCA-TCCTTCCTGTTAAACTAG-A-AT-AATTT--------A-GTTTCGTTC--CTGAATTTCAAC-CT-CAA--------------------TTTAAGT----------------------A--------------GTG----------T-A-AA---------C----AAA-ACA-------T
i Macroglossus_sobrinus.MacSob_scaffold_8222              C 0 C 0
s Mandrillus_leucophaeus.scaffold280                       23931427 110 -  24302211 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGCT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Mandrillus_leucophaeus.scaffold280                      C 0 C 0
s Mandrillus_sphinx.Contig270                                345607 110 +    752769 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGCT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Mandrillus_sphinx.Contig270                             C 0 C 0
s Manis_javanica.JSZB01003497.1                               14922 117 +    737560 CTCAACT----------ATGG------CCTCAT-ATGT--AT-AGTT-GC----------A-AA--ACCACCC-TGTTTCCTGTTGAACTGA-A-AT-AATCTAC------A-GTTTCTTTC--CTGAAT-TCAACCCT-CAG--------------------TTTAAGC----------------------A--------------GTGC---------T-A-----------CC----AAA-GCA-------T
i Manis_javanica.JSZB01003497.1                           C 0 C 0
s Manis_pentadactyla.KN006162.1                               46316 117 -    317179 CTCAACT----------ATGG------CCTCAT-ATGT--AT-AGTT-GC----------A-AA--ACCACCT-TGTTTCCTGTTGAACTGA-A-AT-AATCTAC------A-GTTTCTTTC--CTGAAT-TCAACCCT-CAG--------------------TTTAAGC----------------------A--------------GTGC---------T-A-----------CC----AAA-GCA-------T
i Manis_pentadactyla.KN006162.1                           C 0 C 0
s Marmota_marmota.CZRN01000018.1                           33096728 119 -  40650429 TTCAACT----------GTGA------CCTCAT-CTGG--GT-AGCT-GC----------A-AA--ACCTTCC-TCCTTCTTGTTGAGCTGG-A-AT-AAT----TT-AC-A-GTTTCTTTC--CTGAATTTCAACCCT-CAA--------------------TTTAAGC----------------------A--------------GTG-A--------T--GAA---------C----AAA-ACA-------G
i Marmota_marmota.CZRN01000018.1                          C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                          6220 122 -    207569 CACAACC----------GTGGCCTCGTACTCAT-ATGT--GT-AGTT-GC----------A-AA--ACCGTCA-TCCTTCCCGCTGAACTGG-A-AT-GATTT--------T-GTCCCTTTC--CTGAATTTCAACCCT-CAG--------------------TTTACGC----------------------C--------------GTGCAAA---------------------C----TAG-TCA-------T
i Megaderma_lyra.MegLyr_scaffold_4542                     C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365               5403 119 +     13704 CTTCACT----------GTGG------TCTCAT-ATGT--GC-AGCA-GC----------A-AA--ATCCTCC-TCCTTCCTGTTGATCTGTTA-AT-AATTTAC------A-CATTCTTTC--CTGAATTTCAACCTT-CAA--------------------TTGAAGC----------------------A--------------GTGCAAA---------------------C----AAA-GCA-------T
i Mellivora_capensis.MelCap_flattened_line_69365          C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                  27534 117 +    140813 TGTGACG----------GTGA------CCTCAT-CCAT--GT-AACA-GC----------A-AA--ATCATTC-TCCTTAGTGTTTCTCTGG-A-AT-AAT----T-C---A-GAATCTTCC--CTGAATTTCAATCTG-CAA--------------------TTTAAGC----------------------A--------------G--CAA-------T--GA---------CC----AAA-GCT-------G
i Meriones_unguiculatus.MerUng_scaffold_7390              C 0 C 0
s Mesocricetus_auratus.KB708134.1                          12177563 118 -  29670104 TAAAACT----------GTGA------CCTTGG-CAAT--AT-AGCA-GC----------A-AA--ATCatcc-tccttcctgtttccctgg-a-cTAAAT----T-C---A-GGTTCTTTC--CTGAATTTCAATCCA-CAA--------------------TTTAAGG----------------------G--------------A--CAA-------T--GAA---------T----AAA-GCT-------C
i Mesocricetus_auratus.KB708134.1                         I 153 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                     2435 118 +     10310 CTCAACT----------GTAG------CCTCAC-ATGT--GT-AGTT-GA----------A-AA--ACCATCC-TCCTTCCTGTTGAACTGG-A-AT-AATTTAC------A-ATTTCTTTA--CAGAATTTCAACCCT-CAA--------------------TTTAAGC----------------------A--------------GTGCAA-------T--------------C----AAA-GCA-------T
i Mesoplodon_bidens.MesBid_scaffold_108144                C 0 C 0
s Microcebus_murinus.CM007674.1                            18282273  55 -  93316391 CTTGACT----------GTGG------CCTCAT-ATGT--GT-AGTT-GC---------AA-AACCA---TCC-TCCTTCCTGTGGAACt---------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Microcebus_murinus.CM007674.1                           C 0 I 55
s Microgale_talazaci.MicTal_scaffold_6613                     14851 102 -    145209 ----------------------------------------GC-AATT-GA----------A-AA--ACCATCC-TACTTTATGTAGAACAGT-A-AT-AATTTAC-AGTT-G-GTTTCTTTC--TTGAATTTCAACTCA-TAA--------------------AGTAAGC----------------------A--------------AT--AGA---------GAA---------C----TGA-GCA-------C
i Microgale_talazaci.MicTal_scaffold_6613                 I 19 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                 12819 115 -     19307 CTCAGCT----------GTGG------CTTCAT-ATGT--GT-AGTT-GC----------A-GACC---GTCA-CTCTGCCTGCTAAACTGG-A-AT-AATTG--------A-GTCTCTTTC--CTGAATTTCAACTCT-CAA--------------------TTGAAGC----------------------A--------------GTGCAAA---------------------T----GAA-GCA-------T
i Micronycteris_hirsuta.MicHir_scaffold_52381             C 0 C 0
s Microtus_ochrogaster.CM001695.1                          11255963 117 -  27267610 tttagcT----------ATGA------CCTCAT-ATAT--GT-AGCA-GC----------A-AA--ATCATCC-TTCTCCATGTTTCCCTGA-A-AG-AAT----T-C---A-GATTCTTTC--CTGAACTTAAACCTA-TAA--------------------TTTAAGT----------------------A--------------A--CAA-------T--GA---------GG----AAA-ATT-------C
i Microtus_ochrogaster.CM001695.1                         I 190 C 0
s Miniopterus_natalensis.LDJU01000034.1                     1848249 102 +   8254450 CTCAACT----------GTGG------CCTCAG-ATGG--AA-AGCT-GC----------A-AA--ACCATCA-TTCCGCCTGTTACGCCGG-G-AT-GGTTT--------C-GTTTCTTTC--CTGAATTTCAACTCT-CAA--------------------TCTAAAC----------------------A--------------G-----------------------------------------------
i Miniopterus_natalensis.LDJU01000034.1                   C 0 I 10
s Miniopterus_schreibersii.MinSch_scaffold_18080              32118 102 +     64694 CTCAACT----------GTGG------CCTCAG-ATGG--AA-AGCT-GC----------G-AA--ACCATCA-TTCCGCCTGTTACGCCGG-G-AT-GGTTT--------C-GTTTCTTTC--CTGAATTTCAGCCCT-CAA--------------------TCTAAAC----------------------A--------------G-----------------------------------------------
i Miniopterus_schreibersii.MinSch_scaffold_18080          C 0 I 10
s Miopithecus_ogouensis.k141_534055                            3164 110 -     28506 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTGCAACCCT-CAA--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-ACA-------C
i Miopithecus_ogouensis.k141_534055                       C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144         61582 118 -     63350 CTCCACT----------GTGG------CCTCAT-AAGT--GT-AGCT-GC----------A-AA--ATCATCC-TCCTTCCTATTGAATTGG-A-AT-AATTTAC------A-GATTCTTCC--CTGAATTTCAACCTT-CAA--------------------TTTGAGC----------------------A--------------GTACAAA---------------------C----AAA-GCA-------T
i Mirounga_angustirostris.MirAng_flattened_line_22144     C 0 C 0
s Mirza_zaza.k141_1511790                                     38275 112 +     38511 CTTGACT----------GTGG------CCTCAT-ATGT--GT-AGTT-GC---------AA-AACCA---TCC-TCTTTCCTGTGGAACTGG-A-AT-AATTTAT------A-GTTTCTTTT--CTGAATTTCAACTGT-CAA--------------------TTTATGT----------------------G--------------G---------------------------C----AAA-GCA-------C
i Mirza_zaza.k141_1511790                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                     25940 118 -    437263 CTCAACT----------GTAG------CCTCAT-ATGT--GT-AGTT-GA----------A-AA--ACCATCC-TCCTTCCTGTTGAACTGG-A-AT-AATTTAC------A-ATTTCTTTA--CAGAATTTCAACCCT-CAA--------------------TTTAAGC----------------------A--------------GTGCAA-------T--------------C----AAA-GCA-------T
i Monodon_monoceros.MonMon_M_scaffold_103                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                  137209 116 -    366855 CTCAACT----------GTGG------CCTCAT-ATGT--GT-AGTT-GC----------A-AA--ACCATCA-CTCTGCCTGTTAAACTGG-A-AT-AATTT--------A-GTTTCTCTC--CTGAATTTCAACCCT-CAA--------------------TTTAAGA----------------------T--------------GTGCAAA---------------------C----AAA-GCA-------T
i Mormoops_blainvillei.MorMeg_scaffold_1417               C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_61429                   26884 118 -     27816 CTCAACT----------GTAG------CCTCAT-ATGT--GT-AGTT-GA----------A-AA--ACCATCC-TTCTTCCTGTTGAACTGG-A-AT-AAGTTAC------A-GTTTCTTTC--CGGAATTTCAACCCT-CAA--------------------TTTAAGC----------------------A--------------GTGCAA-------T--------------C----AAA-GTA-------T
i Moschus_moschiferus.MosMos_scaffold_61429               C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                    23709 119 +     37127 CTCAACT----------GTGG------CCTCAT-ATGT--CT-AGCT-GC----------A-AA--ATCACCG-TCCTTCCTGTTGGACTGG-A-AT-AATTTAC------A-GATTCCTTC--CTGAATTTCAACCTT-CCA--------------------TTTAAGT----------------------A--------------GT-----------T-ACAAA--------C----AAA-GCA-------T
i Mungos_mungo.MunMun_flattened_line_23663                C 0 C 0
s Murina_feae.MurFea_scaffold_85699                            4310 115 +     14753 TTCAACT----------GTGG------CCTCAG-ATGT--GT-AGCT-GC----------A-A--GACCATCA-CTCTGCCTGTGAAACTG--A-AT-AATTT--------C-ATTTCTTTC--CTGGATTTCTTCCCT-CCA--------------------TGCAAGT----------------------A--------------ATGCAAA---------------------C----AAA-GAA-------T
i Murina_feae.MurFea_scaffold_85699                       C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313               1669 119 +     14296 TTCAACT----------GTAA------CCTCAG-CTGCA-GT-AGCC-GC----------A-AA--ACCATCC-TCCTTCCTGTTGAACTGG-A-AT-AAT----T--AC-A-GTTTCTTTT--CTGATTCCCAACCCT-CAA--------------------TTTAAGC----------------------A--------------ATG---------GT--GA---------GC----AAA-ACA-------C
i Muscardinus_avellanarius.MusAve_scaffold_82313          C 0 C 0
s Mustela_putorius.JH418006.1                                297048 118 -  14710649 CTTCACT----------GTGG------TCTCCT-ATGT--GC-AGCA-GC----------A-AA--ATCATCC-TCCTTCCTGTTGAACTGT-A-AC-AATTTAC------A-CATTCTTTC--ATGAATTTCAACCTT-CAA--------------------TTGAAGC----------------------A--------------GTACAAA---------------------C----AAA-GCA-------T
i Mustela_putorius.JH418006.1                             C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                      70503  66 -     80779 TTCAACT----------GTGA------CCTCAT-GTGT--GT-GGCC-AA---------AA-AACCACCATCC-TCCTTCCTATTGAACTGT-A-TC-AAT----------------------------------------------------------------------------------------------------------------------------------------------------------
i Myocastor_coypus.MyoCoy_scaffold_10123                  C 0 I 40
s Myotis_brandtii.KE162005.1                                 277416 116 -  10118263 CTCAACT----------GTGG------CCTCAG-ATGT--GT-AGTT-GC----------A-A--GACCATCA-TTCTGCCTGTGAAACTgg-a-at-aattt--------c-atttctttc--ctggATTTTATCTCT-CCA--------------------TGCAAGC----------------------A--------------GTGCAAA---------------------C----AAA-AAG-------T
i Myotis_brandtii.KE162005.1                              C 0 C 0
s Myotis_davidii.KB100139.1                                 1584988 116 -   6019432 CTCAACT----------GTGG------CCTCAG-CTGT--GT-AGTT-GC----------A-A--GACCATCA-TTCTGCCTGTGAAACTGG-A-AT-AATTT--------C-GTTTCTTTC--CTGGATTTCATCCCT-CCA--------------------TGCAAGC----------------------A--------------GTGCAAA---------------------C----AAA-GAA-------T
i Myotis_davidii.KB100139.1                               C 0 C 0
s Myotis_lucifugus.GL429869.1                               3901205 116 -   4330536 CTCAACT----------GTGG------CCTCAG-ATGT--GT-AGTT-GC----------A-A--GACCATCA-TTCTGCCTGTGAAACTgg-a-at-aattt--------c-atttctttc--ctggaTTTTATCTCC-CCA--------------------TGCAAGC----------------------A--------------GTGCAAA---------------------C----AAA-AAA-------T
i Myotis_lucifugus.GL429869.1                             C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                         31755 116 +     33610 CTCAACT----------GTGG------CCTCAG-ATGT--GT-AGTT-GC----------A-A--GACCATCA-TTCTGCCTGTGAAACTGG-A-AT-AATTT--------C-GTTTCTTTC--CTGGATTTCATCCCT-CCA--------------------TGCAAGC----------------------A--------------GTGCAAA---------------------C----AAA-GAA-------T
i Myotis_myotis.MyoMyo_scaffold_28916                     C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081               185472 119 +    196477 CTCAACT----------GTGT------CCTCAT-AAGC--AT-AGTT-GC----------A-AA--ACCAACCCCACTTCCCGTTGAACAGG-A-AT-AATTTAT------C-ATTTCTTTC--CTGAATTTCAACC-T-CAA--------------------GTTAAGC----------------------A--------------GT--AGA---------GAA---------C----AAA-GCA-------C
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081            C 0 C 0
s Nannospalax_galili.KL204047.1                             2024918  52 -   3037898 ---------------------------------------------------------------------------------------------------------------A-GATTCTTTC--TTGTCTTTCAACCTT-CAG--------------------TTTAAGC----------------------A--------------ATG---------GT--GAA---------T----GAA-GCA-------G
i Nannospalax_galili.KL204047.1                           I 52 C 0
s Nasalis_larvatus.k141_413338                                 9173 114 +     21681 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-GACTGAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAG--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Nasalis_larvatus.k141_413338                            C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                 20298573 118 +  31847680 CTCCACT----------GTGG------CCTCAT-AAGT--GT-AGCT-GC----------A-AA--ATCATCC-TCCTTACTGTTGAATTGG-A-AT-AATTTAC------A-GATTCTTCC--CTGAATTTCAACCTT-CAA--------------------TTTGAGC----------------------A--------------GTACAAA---------------------C----AAA-GCA-------T
i Neomonachus_schauinslandi.NINY01007730.1                C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                    5864896 118 +   7148211 CTCAACT----------GTAG------CCTCAT-ATGT--GT-AGTT-GA----------A-AA--ACCATCC-TCCTTCCTGTTGAACTGG-A-AT-AATTTAC------A-ATTTCTTTA--CAGAATTTCAACCCT-CAA--------------------TTTAAGC----------------------A--------------GTGCAA-------T--------------C----AAA-GCA-------T
i Neophocaena_asiaeorientalis.KZ687982.1                  C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                     755782 116 +    783361 CTCAACT----------GCAA------CCTCAT-CTGT--GC-ACTT-GC----------A-AA--ACCATCC-TTCTGCCTGTTAAACTGG-A-AT-AATTT--------C-GTTTCTTTC--CTGAATGTCAACCCT-CAA--------------------TTTAAGC----------------------A--------------ACGCAAA---------------------C----AAA-GCA-------T
i Noctilio_leporinus.NocLep_scaffold_251                  C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                9145244 117 -   9404916 CTCCACT----------GTGG------CCTCAT-ATGT--GT-AGCT-G-----------A-AA--ATCATCC-TCCATCCTGTAGAACTAG-A-AT-AATTTAC------A-AATTCTTTC--CTGAATTTCAACCTT-CAA--------------------TTTAAGC----------------------A--------------GTACAAA---------------------C----AAA-GCA-------T
i Nyctereutes_procyonoides.CAJHUB010000658.1              C 0 C 0
s Nycticebus_bengalensis.LG01                             102569135 112 - 196305487 CTTGACT----------GTGG------CCTCAC-ATTT--GT-AGTC-AC---------AA-AAC-A--AACC-TCCTTACTGTGGAACTAG-A-AT-AATTTAC------A-GTTTATTTC--CTGAATTTCAATTCT-CAA--------------------TTTAAGC----------------------A--------------A---------------------------C----AAA-TTT-------T
i Nycticebus_bengalensis.LG01                             C 0 C 0
s Nycticebus_coucang.k141_7325916                              3914 112 -      4362 CTTGACT----------GTGG------CCTCAC-ATTT--GT-AGTC-AC---------AA-AAC-A--AACC-TCCTTACTGTGGAACTAG-A-AT-AATTTAC------A-GTTTATTTC--CTGAATTTCAATTCT-CAA--------------------TTTAAGC----------------------A--------------A---------------------------C----AAA-TTT-------T
i Nycticebus_coucang.k141_7325916                         C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        105733166 112 + 199412804 CTTGACT----------GTGG------CCTCAC-ATTT--GT-AGTC-AC---------AA-AAC-A--AACC-TCCTTACTGTGGAACTAG-A-AT-AATTTAC------A-GTTTATTTC--CTGAATTTCAATTCT-CAA--------------------TTTAAGC----------------------A--------------A---------------------------C----AAA-TTT-------C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        C 0 C 0
s Ochotona_princeps.JH802162.1                              1355084 117 +   3988456 CTCAACT----------GTGG------CTTC-T-GTGT--GG-AGCT-GT----------A-AA--ACTTCCC-TTCTTCCCGTTGACAAAG-A-AG-AATTTAC------A-GTTTCCTTC--CTGAAT-TTAACCCT-CGG--------------------TTTAACA----------------------A--------------ATGGA-----------GAA---------C----AAA-GCA-------C
i Ochotona_princeps.JH802162.1                            C 0 C 0
s Octodon_degus.JH651603.1                                   745799  63 +  11899542 TTCAACT----------GTGA------CCTCAT-GTGT--GT-AGCT-GA----------A-AA--ACCATCC-TCCTTCTTGTTGAACTGT-A-TT-AAT----------------------------------------------------------------------------------------------------------------------------------------------------------
i Octodon_degus.JH651603.1                                C 0 I 40
s Odobenus_rosmarus.KB229312.1                               500100 118 -   2017862 CTCCACT----------GTGG------CCTCAT-AAGT--GT-AGCT-GC----------A-AA--ATCATCC-TCCTTCTTGTTGAATTGG-A-AT-AATTTAC------A-GATTCTTCC--CTGAATTTCAACCTT-CAA--------------------TATAAGC----------------------A--------------GTACAAA---------------------C----AAA-GCA-------T
i Odobenus_rosmarus.KB229312.1                            C 0 C 0
s Odocoileus_virginianus.KZ100018.1                          144121 118 +    630418 CTCAACT----------GTAG------CCTCAT-ATGT--AT-AGTT-GA----------A-AA--ACCATCC-TTCTTCCTGTTGAACTGG-A-AT-AATTTAC------A-GTTTCTTTC--CGGAATTTCAACCCT-CAA--------------------TTTAAGC----------------------A--------------ATGCAA-------T--------------C----AAA-GCA-------T
i Odocoileus_virginianus.KZ100018.1                       C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                           76166 118 -    150152 ctcAACT----------GTGG------CCTCAT-ATGT--GT-AGTT-GA----------A-AA--ACCATCC-TTCTTCCTGTTGAACTAG-A-AT-AATTTAC------A-GTTTCTTTC--CGGAATTTCAACCCT-CAA--------------------TTTAAGC----------------------A--------------GTGCAA-------T--------------C----AAA-GCA-------T
i Okapia_johnstoni.LVCL01S0005463.1                       C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                    16280 117 +     28053 TTTAGCT----------GTGA------CCTCCT-ATAT--GT-AGCA-GC----------A-AA--ATCATCT-TTTTTCATGTTTCCCTAA-A-AT-AAA----T-C---A-GATTCTTTC--CTGAATTTAAACCTA-TAA--------------------TTTAAGG----------------------A--------------A--CAA-------T--GA---------GA----AAA-ATT-------C
i Ondatra_zibethicus.OndZib_scaffold_46174                I 195 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                     74402  92 +    102263 ---------------------------------------------CA-GC----------A-AA--ATCATCC-TCCTTCCTGTTTCTCTGG-A-AT-AAT----TT----A-GACTCTTTC--CTGAACTTAAAACTA-CAA--------------------TTTAAGG----------------------G--------------G--C--------CTT-GA---------GC----AAA-GCT-------C
i Onychomys_torridus.OnyTor_scaffold_2986                 I 287 C 0
s Orcinus_orca.KB316932.1                                   2780811 118 -  10937097 CTCAACT----------GTAG------CCTCAT-ATGT--GT-AGTT-GA----------A-AA--ACCATCC-TCCTTCCTGTTGAACTGG-A-AT-AATTTAC------A-ATTTCTTTA--CAGAATTTCAACCCT-CAA--------------------TTTAAGC----------------------A--------------GTGCAA-------T--------------C----AAA-GCA-------T
i Orcinus_orca.KB316932.1                                 C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387                6219 102 -     18566 ----------------------------------------GT-AGTT-GA----------A-AA--ATCATCC-TCTATCCTGTTGAACAGG-A-AT-AATTTAC--AATTA-GTTTCTTTC--CTGAATTTCAGCCCT-CAA--------------------GTTAAAC----------------------A--------------GTGGA-----------GAA---------T----AAA-GCA-------C
i Orycteropus_afer.OryAfe_flattened_line_144387           I 9 C 0
s Oryctolagus_cuniculus.CM000791.1                         67143827 117 + 174332312 CTCAACT----------GTGG------CCTC-T-TTGT--GG-AGCT-GC----------A-AA--ACCATCC-TCTCTCCTGTTGAATAGG-A-AT-AATTTAC------A-GTTCTCTTC--CTGAAT-TCAACCCA-AAA--------------------TTTTAGC----------------------A--------------ATGGA-----------GAA---------C----AAA-GCA-------C
i Oryctolagus_cuniculus.CM000791.1                        C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        458004 117 -    559221 CTCCACT----------GTGG------CCTCAT-ATGT--GT-AGCT-G-----------A-AA--ATTATCC-TCCATCCTGTAGAACTAG-A-AT-AATTTAC------A-AATTCTTTC--CTGAATATCAACCTT-CAA--------------------TTTAAGC----------------------A--------------GTACAAA---------------------C----AAA-GCA-------T
i Otocyon_megalotis.JAEUCK010005147.1                     C 0 C 0
s Ovis_aries.CM001607.2                                    17584479 104 +  44047080 CTCAACT----------GTAG------CCTCAT-ATGT--GT-AGTT-GA----------A-AA--ACCATCC-TTCTTCCTGTTGAACTGG-A-AT-AATTTAC------A-GTTTCTTTC--CGGAATCTCAACCCT-CAA--------------------TTTAAGC----------------------A--------------G-----------------------------------------------
i Ovis_aries.CM001607.2                                   C 0 I 10
s Ovis_canadensis.OviCan_scaffold_2572                       172896 118 -    191736 CTCAACT----------GTAG------CCTCAT-ATGT--GT-AGTT-GA----------A-AA--ACCATCC-TTCTTCCTGTTGAACTGG-A-AT-AATTTAC------A-GTTTCTTTC--CGGAATCTCAACCCT-CAA--------------------TTTAAGC----------------------A--------------GTGCAA-------T--------------C----AAA-GCA-------T
i Ovis_canadensis.OviCan_scaffold_2572                    C 0 C 0
s Pan_paniscus.KQ411613.1                                     35558 114 +     80009 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TTC-TCGCTCCTGTGGAACTGG-A-AA-GATTTAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AGTGGGAA-------A---------------------------C----AAA-GCA-------C
i Pan_paniscus.KQ411613.1                                 C 0 C 0
s Pan_troglodytes.CM009242.2                              189136508 114 + 189151597 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TTC-TCGTTCCTGTGGAACTGG-A-AA-GATTTAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AGTGGGAA-------A---------------------------C----AAA-GCA-------C
i Pan_troglodytes.CM009242.2                              C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   139984 118 +    230217 CTCAACT----------GTGG------CCTCAT-ATGT--AT-AGCC-GC----------A-AA--ACCACCC-TCCTTTCTTTTGAACTGG-A-AT-AATTTAC------A-GATTCTTTC--CAGAATTTCAACCTT-CAA--------------------TTTAAGT----------------------A--------------GTACAAA---------------------G----AAA-ACA-------A
i Panthera_onca.PanOnc_flattened_line_3271                C 0 C 0
s Panthera_pardus.KV860321.1                                 251513 118 +  18783137 CTCAACT----------GTGG------CCTCAT-ATGT--AT-AGCC-GC----------A-AA--ACCACCC-TCCTTTCTTTTGAACTGG-A-AT-AATTTAC------A-GATTCTTTC--CAGAATTTCAACCTT-CAA--------------------TTTAAGT----------------------A--------------GTACAAA---------------------G----AAA-ACA-------A
i Panthera_pardus.KV860321.1                              C 0 C 0
s Panthera_tigris.KE722367.1                                4709954 118 -   8748460 CTCAACT----------GTGG------CCTCAT-ATGT--AT-AGCC-GC----------A-AA--ACCACCC-TCCTTTCTTTTGAACTGG-A-AT-AATTTAC------A-GATTCTTTC--CAGAATTTCAACCTT-CAA--------------------TTTAAGT----------------------A--------------GTACAAA---------------------G----AAA-ACA-------A
i Panthera_tigris.KE722367.1                              C 0 C 0
s Pantholops_hodgsonii.KE114653.1                           1263829 118 -   2937107 CTCAACT----------GTAG------CCTCAT-ATGT--GT-AGTT-GA----------A-AA--ACCATCC-TTCTTCCTGTTGAACTGG-A-AT-AATTTAC------A-GTTTCTTCC--CGGAATCTCAACCCT-CAA--------------------TTTAAGC----------------------A--------------GTGCAA-------T--------------C----AAA-GCA-------T
i Pantholops_hodgsonii.KE114653.1                         C 0 C 0
s Papio_anubis.CM001495.2                                 183436749 110 + 183742232 CTCCACC----------GTGG------CCTCAT-ATAT--GT-TGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AGTGGGGA-------A---------------------------C----AAA-GCA-------C
i Papio_anubis.CM001495.2                                 C 0 C 0
s Papio_cynocephalus.k141_4307930                               811 110 +     20448 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AGTGGGGA-------A---------------------------C----AAA-GCA-------C
i Papio_cynocephalus.k141_4307930                         C 0 C 0
s Papio_hamadryas.Contig39                                 20557433 110 +  20919399 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AGTGGGGA-------A---------------------------C----AAA-GCA-------C
i Papio_hamadryas.Contig39                                C 0 C 0
s Papio_kindae.k141_4051466                                    1011 110 -      1598 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AGTGGGGA-------A---------------------------C----AAA-GCA-------C
i Papio_kindae.k141_4051466                               C 0 C 0
s Papio_papio.k141_802527                                      2843 110 +     27711 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AGTGGGGA-------A---------------------------C----AAA-GCA-------C
i Papio_papio.k141_802527                                 C 0 C 0
s Papio_ursinus.k141_3428135                                   2832 110 +      9205 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AGTGGGGA-------A---------------------------C----AAA-GCA-------C
i Papio_ursinus.k141_3428135                              C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_163540       781 118 +      1892 CCTGACT----------GTGG------CCTCAT-ATGT--AG-GGCT-GC----------A-AA--ATCACCC-TTCTTCCTGTTCAACTGT-A-AT-AATTTAC------A-GATTCCTTC--CTGAATTTCAACCTT-CCA--------------------TTTAAGT----------------------A--------------GTACAAA---------------------C----AAA-GCA-------T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_163540 I 43 I 241
s Perognathus_longimembris.PerPac_flattened_line_34437        24574 123 +     32600 TTCAACT----------GTTT------CTTGGT-ATGT--GT-AGCA-GC----------A-AA--ACCATCT-TCCTTCCTAATGAACTAG-A-AT-AAT----T-CTGGA-GTTTTTTTTCCCTCAATTTGAATTCT-TAG--------------------TTTAAGC----------------------A--------------ATG-A--------T-AGAA---------C----AAA-GAA-------G
i Perognathus_longimembris.PerPac_flattened_line_34437    C 0 I 122
s Peromyscus_maniculatus.KI615324.1                        18187174 116 -  18517816 tttaact----------gtga------ccTCTT-ACAT--GT-AACA-GC----------A-AA--GTcatcc-tccttcctgtttctctag-A-AT-AAT----T-C---A-GATTTTTTC--CTGAACTTAAACCCA-CA---------------------TTTAAGG----------------------G--------------A--CTA-------T--GA---------GC----AAA-GCT-------C
i Peromyscus_maniculatus.KI615324.1                       I 236 C 0
s Petromus_typicus.PetTyp_scaffold_42190                      25347  40 -     29689 -----------------------------------------------------------------------------------------------------------------------------TGAATATCCACTTT-GAC--------------------ATC-AGT----------------------A--------------A---A-------GT--GACA--------C----AAA-GCA-------C
i Petromus_typicus.PetTyp_scaffold_42190                  I 61 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159                7858 118 +     63832 CTCAACT----------GTAG------CCTCAT-ATGT--GT-AGTT-GA----------A-AA--ACCATCC-TCCTTCCTGTTGAACTGG-A-AT-AATTTAC------A-ATTTCTTAA--CAGAATTTCAACCCT-CAA--------------------TTTAAGC----------------------A--------------GTGCAA-------T--------------C----AAA-GCA-------T
i Phocoena_phocoena.PhoPho_flattened_line_24159           C 0 C 0
s Piliocolobus_badius.k141_1234363                            37691 114 +     62158 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACCGG-A-AA-GACTGAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Piliocolobus_badius.k141_1234363                        C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         32420 114 +     89929 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACCGG-A-AA-GACTGAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Piliocolobus_gordonorum.k141_381342                     C 0 C 0
s Piliocolobus_kirkii.k141_448987                             33836 114 +     51399 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACCGG-A-AA-GACTGAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Piliocolobus_kirkii.k141_448987                         C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                 14290055 114 -  14605196 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACCGG-A-AA-GACTGAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Piliocolobus_tephrosceles.PDMG02000141.1                C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_7723              78774 116 +     79650 CTCAACT----------GTGG------CCTCAG-ATGT--GC-AGTT-GT----------A-A--GACCATCA-TTCTGCCTGTGAACCTGG-A-AT-AATTT--------C-GTTTCTTTC--CTGAATTCCATCCCT-CCG--------------------TGCAAGC----------------------A--------------GTGCAAA---------------------C----AAA-GGA-------T
i Pipistrellus_pipistrellus.PipPip_scaffold_7723          C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310            33570 118 +     35617 CTCAACT----------GTAG------CCTCAT-ATGT--GT-AGTT-GA----------A-AA--ACCATCC-TCCTTCCTGTTGAACTGG-A-AT-AATTTAC------A-ATTTCTTTA--CAGAATTGCAACCCT-CAA--------------------TTTAAGC----------------------A--------------GTGCAA-------T--------------C----AAA-GCA-------T
i Platanista_gangetica.PlaMin_flattened_line_32310        C 0 C 0
s Pongo_abelii.CM009266.2                                 189124597 114 + 189387572 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCGTTCCTGTGGAACTGG-A-AA-GATTTAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAG--------------------TGTAAGC----------------------AGTGGGGA-------A---------------------------C----AAA-GCA-------C
i Pongo_abelii.CM009266.2                                 C 0 C 0
s Pongo_pygmaeus.ctg66                                      9564440 114 +   9816681 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCGTTCCTGTGGAACTGG-A-AA-GATTTAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAG--------------------TGTAAGC----------------------AGTGGGGA-------A---------------------------C----AAA-GCA-------C
i Pongo_pygmaeus.ctg66                                    C 0 C 0
s Presbytis_comata.k141_677006                                67333  60 -     81375 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACCGG-A-AA-GACTG--------------------------------------------------------------------------------------------------------------------------------------------------------
i Presbytis_comata.k141_677006                            C 0 I 50
s Presbytis_mitrata.k141_2342859                               9153 114 +     10147 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACCGG-A-AA-GACTGAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAG--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------G----AAA-GCA-------C
i Presbytis_mitrata.k141_2342859                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                   9341 118 -     22811 CTCTTTT----------GTAC------CCTCAT-GTGT--GT-AGTG-GA----------A-AA--AGCATCC-TCTTTCCTGTTGAACAGG-A-AT-AATTTAC-AGTG-A-GTCTCTTTC--TTGGATTTCAACCCT-CA-------------------------AGC----------------------A--------------CTGGA-----------GA---------GC----AAA-GCA-------C
i Procavia_capensis.ProCapCap_scaffold_85530              C 0 C 0
s Prolemur_simus.MPIZ01000396.1                             2592191 112 -   4620579 CTTGACT----------CTGG------CCTCAT-ATGT--GT-AGTT-GC---------AA-AACCA---TCC-TCCTTCTTGTGGAACTGG-A-AT-AATTTAC------A-GTTTCTTTC--CTGAATTTCAACCCT-CAA--------------------TTTATGC----------------------A--------------G---------------------------C----AAA-GCA-------C
i Prolemur_simus.MPIZ01000396.1                           C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                      985304 112 +   2598838 CTGGACT----------GTGG------CCTCAT-ATGT--GT-AGTT-GC---------AA-AACCA---TCC-TTCTTCCTGTGGAACTGG-A-AT-AATTTAC------A-GTTTCTTTC--CTGCATTTCAACCCT-CAA--------------------TTTATGC----------------------A--------------G---------------------------C----AAA-GCA-------C
i Propithecus_coquerelli.NW_012148875.1                   C 0 C 0
s Propithecus_coronatus.k141_347390                           23596 112 +     38485 CTGGACT----------GTGG------CCTCAT-ATGT--GT-AGTT-GC---------AA-AACCA---TCC-TTCTTCCTGTGGAACTGG-A-AT-AATTTAC------A-GTTTCTTTC--CTGCATTTCAACCCT-CAA--------------------TTTATGC----------------------A--------------G---------------------------C----AAA-GCA-------C
i Propithecus_coronatus.k141_347390                       C 0 C 0
s Propithecus_diadema.k141_1034595                            11683 112 -     12046 CTGGACT----------GTGG------CCTCAT-ATGT--GT-AGTT-GC---------AA-AACCA---TCC-TTCTTCCTGTGGAACTGG-A-AT-AATTTAC------A-GTTTCTTTC--CTGCATTTCAACCCT-CAA--------------------TTTATGC----------------------A--------------G---------------------------C----AAA-GCA-------C
i Propithecus_diadema.k141_1034595                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                           21124 112 +     35766 CTGGACT----------GTGG------CCTCAT-ATGT--GT-AGTT-GC---------AA-AACCA---TCC-TTCTTCCTGTGGAACTGG-A-AT-AATTTAC------A-GTTTCTTTC--CTGCATTTCAACCCT-CAA--------------------TTTATGC----------------------A--------------G---------------------------C----AAA-GCA-------C
i Propithecus_edwardsi.k141_1176054                       C 0 C 0
s Propithecus_perrieri.k141_1630595                           16371 112 +     17239 CTGGACT----------GTGG------CCTCAT-ATGT--GT-ACTT-GC---------AA-AACCA---TCC-TTCTTCCTGTGGAACTGG-A-AT-AATTTAC------A-GTTTCTTTC--CTGCATTTCAACCCT-CAA--------------------TTTATGC----------------------A--------------G---------------------------C----AAA-GCA-------C
i Propithecus_perrieri.k141_1630595                       C 0 C 0
s Propithecus_tattersalli.k141_790011                         23130 112 -     67325 CTGGACT----------GTGG------CCTCAT-ATGT--GT-AGTT-GC---------AA-AACCA---TCC-TTCTTCCTGTGGAACTGG-A-AT-AATTTAC------A-GTTTCTTTC--CTGCATTTCAACCCT-CAA--------------------TTTATGC----------------------A--------------G---------------------------C----AAA-GCA-------C
i Propithecus_tattersalli.k141_790011                     C 0 C 0
s Propithecus_verreauxi.k141_1019028                          12846 112 -     13615 CTGGACT----------GTGG------CCTCAT-ATGT--GT-AGTT-GC---------AA-AACCA---TCC-TTCTTCCTGTGGAACTGG-A-AT-AATTTAC------A-GTTTCTTTC--CTGCATTTCAACCCT-CAA--------------------TTTATGC----------------------A--------------G---------------------------C----AAA-GCG-------C
i Propithecus_verreauxi.k141_1019028                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                              5176 117 -     21651 TGTGACG----------GTGA------CCTCAT-CCAT--GT-AACA-GC----------A-AA--ATCATTC-TCCTTAGTGTTTCTGTGG-A-AT-AAT----T-C---A-GAATCTTCC--CTGATTTTCAACCTG-CAT--------------------TTTAAGC----------------------A--------------G--CAA-------T--GA---------CC----AAA-GCC-------G
i Psammomys_obesus.NESX01036370.1                         C 0 C 0
s Pteronotus_parnellii.KE909381.1                             10591 116 -     21811 CTCAACT----------GTGG------CCTCAT-ATGT--GT-AGTT-GC----------A-AAGC-C-ATCA-CTCTGCCTGTTAAACTGG-A-AT-AATTT--------A-GTTTCTTTC--CTGAATTTCAACCCT-CAA--------------------TTTAAGC----------------------A--------------GTGCAA----------G-----------C----AAA-GCA-------T
i Pteronotus_parnellii.KE909381.1                         C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117          36069 118 +     42204 CTTCACT----------GTGG------TCTCAT-ATGT--GC-AGCA-GC----------A-AA--ATCATCC-TCCTTCCTGTTGAACTGT-A-AT-AATTTAC------A-TATTCTTTC--CTAAATTTCAACCTT-CAA--------------------TTGAAGC----------------------A--------------GTACCAA---------------------C----AAA-GCA-------T
i Pteronura_brasiliensis.PteBra_flattened_line_31117      C 0 C 0
s Pteropus_alecto.KB030862.1                               22973084 116 +  28871421 CTCAACT----------GTGG------GCTCAT-ATGT--GT-AGTT-GC----------A-AA--ACCATCA-TCCTTCCTGTTAAACTGG-A-AT-AATTT--------A-GTTTCATTC--CCGAATTTCAACCCT-CAA--------------------TTTAAGC----------------------A--------------GTG----------T-A-AA---------C----AAA-ACa-------c
i Pteropus_alecto.KB030862.1                              C 0 C 0
s Pteropus_vampyrus.KN534172.1                                 1018 116 -      8028 CTCAACT----------GTGG------GCTCAT-ATGT--GT-AGTT-GC----------A-AA--ACCATCA-TCCTTCCTGTTAAACTGG-A-AT-AATTT--------A-GTTTCATTC--CCGAATTTCAACCTT-CAA--------------------TTTAAGC----------------------A--------------GTG----------T-A-AA---------C----AAA-ACa-------c
i Pteropus_vampyrus.KN534172.1                            n 1374 C 0
s Puma_concolor.QAVW01001104.1                             20262491 118 -  38429054 CTCAACT----------GTGG------CCTCAT-ATGT--AT-AGCC-GC----------A-AA--ACCACCC-TCCTTTCTTTTGAACTGG-A-AT-AATTTAC------A-GATTCTTTC--CAGAATTTCAATCTT-CGA--------------------TTTAAGT----------------------A--------------g---------------------tacaaag----aaa-aca-------a
i Puma_concolor.QAVW01001104.1                            C 0 C 0
s Pygathrix_cinerea.k141_1153803                               9161 110 -     91421 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAG--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Pygathrix_cinerea.k141_1153803                          C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  7603292 114 +   7812017 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACCGG-A-AA-GACTGAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAG--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Pygathrix_nigripes_b.ctg100                                C 0 C 0
s Pygathrix_nigripes_a.k141_215492                               9129 114 -     72585 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACCGG-A-AA-GACTGAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAG--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Pygathrix_nigripes_a.k141_215492                          C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                   4369 118 +     55207 CTCAACT----------GTAG------CCTCAT-ATGT--AT-AGTT-GA----------A-AA--ACCATCC-TTCTTCCTGTTGAACTGG-A-AT-AATTTAC------A-GTTTCTTTC--CGGAATTTCAACCCT-CAA--------------------TTTAAGC----------------------A--------------ATGCAA-------T--------------C----AAA-GCA-------T
i Rangifer_tarandus.RanTarSib_scaffold_29737              C 0 C 0
s Rattus_norvegicus.chr8                                   20365307 119 + 133307652 TTGAACT----------GCAA------CTTCATTCCAT--GT-AGCA-Gc----------a-a--aatcattt-ttcttcctacttcattaaaa-at-aat-------tc-a-gattCTTTC--CTCAACTTCAATCTG-AAA--------------------TTTAAGC----------------------C--------------A---AAA------T--GA---------GC----AAA-GCT-------C
i Rattus_norvegicus.chr8                                  C 0 I 153
s Rhinolophus_sinicus.LVEH01000134.1                         366329 115 -   3329780 CTCAACT----------GTGG------CCTCAC-AGGT--GT-AGTT-GC----------A-AA--A-AATCA-TCCTTCCTGTTAAACTGG-A-AT-AATTT--------A-GTTTCCTTC--CTGAATTTCAACACT-CAA--------------------TTTAAGC----------------------A--------------GTGCAAA---------------------C----ACA-TCA-------T
i Rhinolophus_sinicus.LVEH01000134.1                      C 0 C 0
s Rhinopithecus_bieti.k119_217274                               543 114 -     11128 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACCGG-A-AA-GACTGAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAG--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Rhinopithecus_bieti.k119_217274                         C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                      91229921 114 - 195417433 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACCGG-A-AA-GACTGAC------T-GTTTCTGTT--CTGAATTTCAACCTT-CAG--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Rhinopithecus_roxellana.NC_044550.1                     C 0 C 0
s Rhinopithecus_strykeri.ctg102                             7665629 114 +   7961872 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GC----------C-A-------TCC-TCCTTCCTGTGGAACCGG-A-AA-GACTGAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAG--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Rhinopithecus_strykeri.ctg102                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                 84064 116 -     96226 CTCAACT----------GTGG------GCTCAT-TTGT--GT-AGCT-GC----------A-AACC-C-ATCA-TCCTTCCTGTTAAACTGG-A-AT-AATTT--------A-GTTTCATTC--CTGAATTTCAACCCT-CAA--------------------TTTAAAT----------------------A--------------GTG----------T-A-AA---------C----AAA-ACA-------T
i Rousettus_aegyptiacus.RouAeg_scaffold_11038             C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                        3019 118 +      4321 CTCAACT----------GTAG------CCTTAT-ATGT--GT-AGTT-GA----------A-AA--ACCATCC-TTCTTCCTGTTGAACTGG-A-AT-AATTTAC------A-GTTTCTTTC--CGGAATTTCAACCCT-CAA--------------------TTTAAGC----------------------A--------------GTG----------T-A------T----CC----AAA-ACA-------T
i Saiga_tatarica.SaiTat_scaffold_373180                   C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                     150741 141 -    313613 CTCAACT----------GTGA------CCTCA---TGT-G-C-AGTT-GC----------A-AA--ATCATCC-TCCTTCCTGCTGTACTGG-A-AT-AATTTAC------A-GTTTCTTTC--CTGAATTTCAACTTT-CAA--------------------TTTAAGT----------------------A--------------ATGCAAAAAAAAATTAGAAAAATAAAAAGAGTTAAA-GCA-------T
i Scalopus_aquaticus.ScaAqu_scaffold_662                  C 0 C 0
s Semnopithecus_entellus.k141_11662                           13672 114 -     19888 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GA----------C-A-------TCC-TCCTTCCTGTGGAACCGG-A-AA-GACTGAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAG--------------------TGTAAGC----------------------AAAGGGGA-------A---------------------------C----AAA-GCA-------C
i Semnopithecus_entellus.k141_11662                       C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                       20878 114 +     39453 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GA----------C-A-------TCC-TCCTTCCTGTGGAACCGG-A-AA-GACTGAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAG--------------------TGTAAGC----------------------AAAGGGGA-------A---------------------------C----AAA-GCA-------C
i Semnopithecus_hypoleucos.k141_1615806                   C 0 C 0
s Semnopithecus_johnii.k141_670120                             1402 114 +     27826 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GA----------C-A-------TCC-TCCTTCCTGTGGAACCGG-A-AA-GACTGAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAG--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Semnopithecus_johnii.k141_670120                        C 0 C 0
s Semnopithecus_priam.k141_638794                               922 114 -     19483 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GA----------C-A-------TCC-TCCTTCCTGTGGAACCGG-A-AA-GACTGAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAG--------------------TGTAAGC----------------------AAAGGGGA-------A---------------------------C----AAA-GCA-------C
i Semnopithecus_priam.k141_638794                         C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                        986 114 +      7198 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GA----------C-A-------TCC-TCCTTCCTGTGGAACCGG-A-AA-GACTGAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAG--------------------TGTAAGC----------------------AAAGGGGA-------A---------------------------C----AAA-GCA-------C
i Semnopithecus_schistaceus.k141_1584426                  C 0 C 0
s Semnopithecus_vetulus.k141_1200928                           9244 114 +     15514 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GA----------C-A-------TCC-TCCTTCCTGTGGAACCGG-A-AA-GACTGAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAG--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Semnopithecus_vetulus.k141_1200928                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                      9128 104 -     12148 TTTAACT----------GTGA------CCACAT-ACAT--TT-AGCA-GC----------A-AA--ATCACCC-TTTTTCCTGTTTCTCTGG-A-AT-AAT----T-C---A-GGTACTTTC---------------CA-CAA--------------------TTTAAGG----------------------G--------------A--CAA-------T--GAA---------C----AAA-ACT-------C
i Sigmodon_hispidus.SigHis_scaffold_60841                 I 203 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840             187103  78 -    191337 --------------------------------------------GTT-GC----------A-AA--ATCATCC-TGCTTCCTATTAAGCTGA-A-AT-AATTTAC------A-GTTTCTTTC--CTGAATTTCAGCTCT-CAA--------------------TTTTAGT-------------------------------------------------------------------------------------
i Solenodon_paradoxus.SolPar_flattened_line_5840          I 23 I 15
s Sorex_araneus.JH798187.1                                 13646440 129 -  18376816 CTCAACT----------GTGA------CCTGAG-TTGTGTGT-AGCT-GC----------A-AA--ACCACCC-TCCTTCCTGttgaactga-a-at-aatttac------a-gTTTTATTC--CTGAATTGCAG-CCT-CAA--------------------TTTAAgc----------------------a--------------g------------------tcaaaaaaca----aaa-aaaggaggcag
i Sorex_araneus.JH798187.1                                C 0 C 0
s Spermophilus_dauricus.KZ294078.1                          1947505 119 -   3870691 TTCAACT----------GTGA------CCTCAT-CTGT--GT-AGCT-GC----------A-AA--ACCTTCC-TCTTTCTTGTTGAGCTGG-A-AT-AAT----TT-AC-A-GTTTCTTTC--CTGAATTTCAACCCT-CAA--------------------TTTAAGC----------------------A--------------GTG-A--------T--GAA---------C----AAA-ACA-------G
i Spermophilus_dauricus.KZ294078.1                        C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              26596 118 +     97271 CTGCACT----------ATGG------CCTCCT-ATGT--AT-AGCT-GC----------A-AA--ATTATCC-TCCTTCCTGTTGAACTGG-A-AT-AATTTAC------A-GATTCTTTC--CTGAATTTCAACCTT-CAA--------------------TTTAAGC----------------------A--------------GTACAAA---------------------C----AAA-GCA-------T
i Spilogale_gracilis.SpiGra_flattened_line_13525          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629                6556 118 -    196729 CTCAACT----------GTGG------CCTCAT-ATGT--CT-AGCT-GC----------A-AA--ATCACCC-TCCTTCCTGTTGGACTGG-A-AT-AATTTAC------A-GATTCCTTC--CTGAATTTCAACCTT-CCA--------------------TTTAAGT----------------------A--------------GTACAAA---------------------C----AAA-GCA-------T
i Suricata_suricatta.SurSur_flattened_line_6629           C 0 C 0
s Sus_scrofa.CM000828.4                                    62881574 104 -  69701581 CTCAACT----------GTAG------CCTCAT-ATGT--GT-AGTT-GA----------A-AA--ATCACCC-CCTTTCCTTCTGaactga-a-at-aatttat------a-atttctttc--tggaatttcAACCCT-CAA--------------------TTTAAGC----------------------A--------------G-----------------------------------------------
i Sus_scrofa.CM000828.4                                   C 0 I 10
s Symphalangus_syndactylus.tarseq_199                       1087226 114 -   1523678 CTCCACC----------GTGG------CCTCAT-ATGT--GT-CGTT-GC----------C-A-------TCC-TCCTCCCTGTGGAACTGG-A-AA-GGTTTAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AGTGGGGA-------A---------------------------C----AAA-GCG-------C
i Symphalangus_syndactylus.tarseq_199                     C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                  6213 116 +     41958 CTCCACT----------GCAG------ACTCAG-ACGT--GT-AGTT-GC----------A-AAGC-C-ATCA-TTCTGCCTGTTAGACTGG-A-AG-AATTT--------C-GTTCCCTTT--CTGAATTTCAACCCT-CAT--------------------TGTAGGC----------------------A--------------GCGCACA---------------------C----AAA-GCA-------T
i Tadarida_brasiliensis.TadBra_scaffold_25820             C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                  68831 119 +    116680 CTCAACT----------GTGT------CCTCAT-CAGC--AT-AGTT-GC----------A-AA--ACCAACCCCACTTCCCATTAAACAGG-A-AT-AATTTAT------C-ATTTCTTTC--CTGAATTTCAACC-T-CAC--------------------GTTAAGC----------------------A--------------GT--AGA---------GAA---------C----AAA-GCA-------C
i Tamandua_tetradactyla.TamTet_scaffold_1782              C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                       114566 118 -    156842 CTCAACT----------GTGG------CCTCAT-CTGT--GC-ACTT-GC----------A-AA--ACCATCC-TCCTTCCTGTTGAACTGG-A-AT-AATTTAC------A-GTTTCTTTC--CTGAATTTCAACCCT-CAA--------------------TTTAAGC----------------------A--------------GTACAAA---------------------C----ACA-GCA-------T
i Tapirus_indicus.TapInd_scaffold_9301                    C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                     383029 118 +    539355 CTCAACT----------GTGG------CCTCAT-CTGT--GC-ACTT-GC----------A-AA--ACCATCC-TCCTTCCTGTTGAACTGG-A-AT-AATTTAC------A-GTTTCTTTC--GTGAATTTCAACCCT-CAA--------------------TTTAAGC----------------------A--------------GTGCAAA---------------------C----AAA-GCA-------T
i Tapirus_terrestris.TapTer_scaffold_755                  C 0 C 0
s Tarsius_lariang.k141_1598868                                 8945 118 -     11412 TTCCACT----------GTGG------CCTTGT-CTGT--GA-GGTG-GC----------A-AACCA---TCC-TCCTTCCTGTTGAACTGG-G-GG-AATTTAC------A-GTTTCTTTC--CTGAATTCCAGTCCT-CAC--------------------TTTAAGC----------------------A-------GTGGAGAA---------------------------C----ACA-GTA-------C
i Tarsius_lariang.k141_1598868                            C 0 C 0
s Tarsius_wallacei.k141_780063                                13661 118 +     25099 TTCCACT----------GTGG------CCTTGT-CTGT--GA-GGTG-GC----------A-AACCA---TCC-TTCTTCCTGTTGAACTGG-A-GG-AATTTAC------A-GTTTCTTTC--CTGAATTCCAGTCCT-CAC--------------------TTTAAGC----------------------A-------GTGGAGAA---------------------------C----ACA-GTA-------C
i Tarsius_wallacei.k141_780063                            C 0 C 0
s Theropithecus_gelada.CM009954.1                         186422258 110 + 186847797 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CATT-GC----------C-A-------TCC-TCCTTCCTGTGGAACTGG-A-AA-----GAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAA--------------------TGTAAGC----------------------AGTGGGGA-------A---------------------------C----AAA-GCA-------C
i Theropithecus_gelada.CM009954.1                         C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223               102502  40 +    114563 -----------------------------------------------------------------------------------------------------------------------------TGAATCCCCACCTT-GGC--------------------TTC-AGT----------------------A--------------ATGC---------T-A----------CGC----AAA-GCA-------C
i Thryonomys_swinderianus.ThrSwi_scaffold_1223            I 61 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                     881 119 +      8208 CTCAACT----------GTAT------CCTCAT-AAGT--GC-AATT-GC----------A-AAGC-C-AACC-CCTGTCCTGTTGAACAGG-A-AT-AATTTAT------A-GTTTCTTTC--CTGAATTTTAACCCT-CAA--------------------ATTAAGC----------------------A--------------GTGGA-----------GAA---------C----AAA-GCA-------C
i Tolypeutes_matacus.TolMat_scaffold_228639               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                      78359 115 +    610378 CTCAGCT----------GTGG------CCTCTT-ATGT--GT-AGTT-GC----------A-AACCA---TCA-CCCTGCCTGTTAAACTGG-A-AT-AATTT--------A-GTTTCTTTC--CTGAATCTCAACTCT-CCA--------------------TTTAAGC----------------------A--------------GTGCAAA---------------------C----AAA-GCA-------T
i Tonatia_saurophila.TonSau_scaffold_294                  C 0 C 0
s Trachypithecus_auratus.k141_722599                           4980 114 -     20410 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GA----------C-A-------TCC-TCCTTCCTGTGGAACCGG-A-AA-GACTGAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAG--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Trachypithecus_auratus.k141_722599                      C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                      9174 114 +     15221 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGCT-GA----------C-A-------TCC-TCCTTCCTGTGGAACCGG-A-AA-GACTGAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAG--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Trachypithecus_crepusculus.k141_1194022                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                         5080 114 +     19930 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GA----------C-A-------TCC-TCCTTCCTGTGGAACCGG-A-AA-GACTGAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAG--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Trachypithecus_cristatus.k141_580354                    C 0 C 0
s Trachypithecus_francoisi.k141_1412647                        1508 114 -     19997 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GA----------C-A-------TCC-TCCTTCCTGTGGAACCGG-A-AA-GACTGAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAG--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Trachypithecus_francoisi.k141_1412647                   C 0 C 0
s Trachypithecus_geei.k141_277701                             41628 114 -     60166 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GA----------C-A-------TCC-TCCTTCCTGTGGAACCGG-A-AA-GACTGAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAG--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Trachypithecus_geei.k141_277701                         C 0 C 0
s Trachypithecus_germaini.k141_912491                          9101 114 -     27529 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GA----------C-A-------TCC-TCCTTCCTGTGGAACCGG-A-AA-GACTGAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAG--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Trachypithecus_germaini.k141_912491                     C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                       9037 114 -     18194 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GA----------C-A-------TCC-TCCTTCCTGTGGAACCGG-A-AA-GACTGAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAG--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Trachypithecus_hatinhensis.k141_143409                  C 0 C 0
s Trachypithecus_laotum.k141_907409                            2776 114 -     21137 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GA----------C-A-------TCC-TCCTTCCTGTGGAACCGG-A-AA-GACTGAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAG--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Trachypithecus_laotum.k141_907409                       C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                     1476 114 -     10723 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GA----------C-A-------TCC-TCCTTCCTGTGGAACCGG-A-AA-GACTGAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAG--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Trachypithecus_leucocephalus.k141_587342                C 0 C 0
s Trachypithecus_melamera.k141_434728                           632 114 +      9834 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GA----------C-A-------TCC-TCCTTCCTGTGGAACCGG-A-AA-GACTGAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAG--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Trachypithecus_melamera.k141_434728                     C 0 C 0
s Trachypithecus_obscurus.k141_190785                         18946 114 +     32220 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GA----------C-A-------TCC-TCCTTCCTGTGGAACCGG-A-AA-GACTGAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAG--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Trachypithecus_obscurus.k141_190785                     C 0 C 0
s Trachypithecus_phayrei.ctg124                             5933044 114 +   6242583 CTCCACC----------GTGG------CCTCAT-ATAT--GT-CGTT-GA----------C-A-------TCC-TCCTTCCTGTGGAACCGG-A-AA-GACTGAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAG--------------------TGTAAGC----------------------AATGGGGA-------A---------------------------C----AAA-GCA-------C
i Trachypithecus_phayrei.ctg124                           C 0 C 0
s Trachypithecus_pileatus.k141_2007326                         2290 114 +     20839 CTCCACC----------GCGG------CCTCAT-ATAT--GT-CGTT-GA----------C-A-------TCC-TCCTTCCTGTGGAACCGG-A-AA-GACTGAC------T-GTTTCTGTT--CTGAATTTCAACCCT-CAG--------------------TGTAAGC----------------------AATGGAGA-------A---------------------------C----AAA-GCA-------C
i Trachypithecus_pileatus.k141_2007326                    C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_124071                      54 118 -      2171 CTCAACT----------GTAG------CCTCGT-ATGT--GT-GGTT-GA----------A-AA--ACCATCC-TTCTCCCTGTTGACCTGG-A-AT-AATTTAC------A-GTTTCTTTC--CGGAATTACAACCCT-CAA--------------------TTTAAGC----------------------A--------------ATGCAA-------T--------------C----AAA-GCA-------T
i Tragulus_javanicus.TraJav_scaffold_124071               C 0 C 0
s Trichechus_manatus.JH594705.1                             4291747 123 +  10818551 CTCTTCT----------GTGT------CTCCAT-ATGT--GT-AGTT-GA----------A-AA--ACCATCC-TCCTTCCTGTTGAACAGG-A-AT-AATTTAC-AGTT-A-GTCTCTGTC--CTGGATTTCAACCCT-CAA--------------------GTTAAGC----------------------A--------------GTGGA-----------GAA---------T----AAA-GCA-------C
i Trichechus_manatus.JH594705.1                           C 0 C 0
s Tupaia_chinensis.KB320699.1                               2148995  81 +   4065304 ------------------------------------------------------------------------C-TCCTTCCTGTCGCACTGG-A-AT-AATTTAC------A-GTTCTTTTC--CTAAATTTTAACCCT-CAA--------------------CTTGAGC----------------------A--------------A--CAGA---------GAA---------C----AAA-ACG-------T
i Tupaia_chinensis.KB320699.1                             I 25 C 0
s Tupaia_tana.TupTan_flattened_line_97126                      2620  81 -     10553 ------------------------------------------------------------------------C-TCCTTCCTGTCGCACTGG-A-AT-AATTTAC------A-GTTCTTTTC--CTAAATTTTAACCGT-CAC--------------------CTTGAGC----------------------A--------------A--CAGA---------GAA---------C----AAA-ACA-------T
i Tupaia_tana.TupTan_flattened_line_97126                 I 25 C 0
s Tursiops_truncatus.MRVK01000835.1                        15737058 118 +  33153633 CTCAACT----------GTAG------CCTCAT-ATGT--GT-AGTT-GA----------A-AA--ACCATCC-TCCTTCCTGTTGAACTGG-A-AT-AATTTAC------A-ATTTCTTTA--CAGAATTTCAACCCT-CAA--------------------TTTAAGC----------------------A--------------GTGCAA-------T--------------C----AAA-GCA-------T
i Tursiops_truncatus.MRVK01000835.1                       C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                    50894 124 -     77625 CTCAACT----------GTGA------CCTCAT-ATGT-G-C-AGTT-GC----------A-AA--ACCATCC-TCCTTCCTACTGAACTGG-A-AT-AATTTAC------A-CTTTATTTC--CTGAATTTCA-CCTT-CAA--------------------TTTAAGT----------------------A--------------GT--A---------GGGAAAA-------AAGTGAAA-GCA-------T
i Uropsilus_gracilis.UroGra_scaffold_12083                C 0 C 0
s Ursus_maritimus.KK499267.1                                4846296 118 -   5085361 CTCCACT----------GTGG------CCTCAT-ATGT--GT-AGCT-GC----------A-AA--ATCATCC-TACTTCCTGTTGAATTGG-A-AT-AATTTAC------A-GATTCTTTC--CTGAATTTCAACCTT-CAA--------------------TTTAAAC----------------------A--------------GTACAAA---------------------C----AAA-GCA-------T
i Ursus_maritimus.KK499267.1                              C 0 C 0
s Varecia_rubra.k141_590885                                    6842 112 +     50397 CTTGACT----------GTGG------CCTCAT-ATGT--GT-AGTT-GC---------AA-AACC---GTCC-TCCTTCCTGTGGAACTGG-A-AT-AATTTAC------A-GTTTCTTTC--CTGAATTTCAACCCT-CAA--------------------TTTATGC----------------------A--------------G---------------------------C----AAA-GCA-------C
i Varecia_rubra.k141_590885                               C 0 C 0
s Varecia_variegata.k141_1128296                               6892 112 +     24756 CTTGACT----------GTGG------CCTCAT-ATGT--GT-AGTT-GC---------AA-AACCA---TCC-TCCTTCCTGTGGAACTGG-A-AT-AATTTAC------A-GTTTCTTTC--CTGAATTTCAACCCT-CAA--------------------TTTATGC----------------------A--------------g---------------------------c----aaa-gca-------c
i Varecia_variegata.k141_1128296                          C 0 C 0
s Vicugna_pacos.KN270157.1                                  5367752 118 -   5488506 CTCAACT----------ATCG------CCTCAT-ATGT--GT-AGTT-GA----------A-AA--ACCATCC-TCCTTCCTGTTGAACTGG-A-AT-AATTTAC------A-ATTTCTTTC--CGGAATTTCAACCCT-CAA--------------------CTTAAGC----------------------A--------------GTGCAA-------T--------------C----AAA-GCA-------T
i Vicugna_pacos.KN270157.1                                C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                   6661 124 -     43706 CTCCACT----------GTGG------CCTCAT-ATGT--GT-AGCT-G-----------A-AA--ATCATCT-TCCATCCTGTAGAACTAG-A-AT-AATTTAC------A-AATTCTTTC--CTGAATATCAACCTTACAAATTCTTTCCTGAATATCAACCTtaagc----------------------a--------------g-----------------------------------------------
i Vulpes_lagopus.VulLag_flattened_line_30954              C 0 I 10
s Xerus_inauris.XerIna_scaffold_48378                         19034 119 -     24430 TTCAACT----------GTGA------CCTCAT-CTAT--GT-AGCT-GC----------A-AA--ACCATCC-TCCTTCCTGTTGAGCTGG-G-AT-AAT----TT-AC-A-ATTTCTTTC--CTGAATTCCAACCCT-CAA--------------------TTTAAGC----------------------A--------------GTG-A--------T--GAA---------C----AAA-ACA-------G
i Xerus_inauris.XerIna_scaffold_48378                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728           1231 118 +      2932 CTCTACT----------GTGG------CCTCAT-AAGT--GT-GGCT-GC----------A-AA--ATCATCC-TCCTTCCTGTTGAATTGG-A-AT-AATTTAC------A-GATTCTTCC--CTGAATTTCAACCTT-CAA--------------------TTTAAGC----------------------A--------------GTACAAA---------------------C----AAA-GCA-------T
i Zalophus_californianus.ZalCal_flattened_line_63728      C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                        9320 119 +     63895 TTCAACT----------GTGA------CCTCAT-ACAT--GT-AGCT-GT----------G-AAGC-C-ATTC-CCCTTCCTGTAGTTCTGG-A-AT-AAG----TT-AC-A-GTTCCTTTC--CTGAATTTCAAACCT-CAA--------------------TTTAAAC----------------------A--------------GTG-A--------T--GAA---------C----AAA-GAA-------C
i Zapus_hudsonius.ZapHud_scaffold_11398                   C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469             10750 118 +     12536 CTCAACT----------GTAG------CCTCAC-ATGT--GT-AGTT-GA----------A-AA--ACCATCC-TCCTTCCTGTTGAACTGG-A-AT-AATTTAC------A-ATTTCTTTA--CAGAATTTCAACCCT-CAA--------------------TTTAAGC----------------------A--------------GTGCAA-------T--------------C----AAA-GCA-------T
i Ziphius_cavirostris.ZipCav_flattened_line_71469         C 0 C 0

a score=0.000000
s hg38.chrUn_KI270753v1                                        310  9 +     62944 C--C-----------------------------T-GTCCA------------------------T
s Acinonyx_jubatus.LLWD01001279.1                           816460 17 -   1699592 c--a-----------------------------t-atcattgg--ggaa--a------------a
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     66100 50 +     87051 AGTTCAATGAGACAAAG-AAATG-AGGAAGA--G-GGAAA----------GGGAAAAGTGAAGGA
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506414 16 -  29979442 C--A-----------------------------T-agcagtgg--gg--gg-------------a
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             74702 15 -    347723 C--A-----------------------------T-AGCAG------------------TGGGGGG
i Ailurus_fulgens.LNAC01001112.1                         I 10 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64435  8 -     89534 A--G-----------------------------T-TTCAA-------------------------
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 2
s Allenopithecus_nigroviridis.k141_3361533                    8783  9 -     52922 C--C-----------------------------T-GTCCC------------------------T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          8708  9 -     28001 C--C-----------------------------T-GTCCC------------------------T
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           8834  9 -      9772 C--C-----------------------------T-GTCCC------------------------T
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_2289504                         19946  9 +     20096 C--C-----------------------------T-GTCTC------------------------T
i Allochrocebus_solatus.k141_2289504                     C 0 N 0
s Ammotragus_lervia.NIVO01071767.1                          674740 11 -   2318259 C--G-----------------------------T-ATCAGTg----------------------g
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      182617 11 +    412891 C--A-----------------------------T-ATCAA----------------------TGA
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97190 12 -    100397 C--A-----------------------------T-ATCAG---------------------TAGG
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       6695 11 +     20879 A--G-----------------------------T-ATCAA----------------------TGA
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_1894080                        5441  9 +      5713 A--A-----------------------------C-ATCAA------------------------T
i Arctocebus_calabarensis.k141_1894080                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  1969 11 +     43469 C--A-----------------------------T-ATCAA----------------------TGA
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  48658  9 -     92717 a--g-----------------------------t-atcaa------------------------t
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              49255  9 +     85213 A--G-----------------------------T-ATCAA------------------------T
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191032 11 +  23207421 C--A-----------------------------T-accaatg----------------------a
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         1498 11 -     18090 C--A-----------------------------T-accaatg----------------------a
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    25662 11 +     34529 C--G-----------------------------T-GTCAG----------------------TGG
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    198412 11 -    288883 C--G-----------------------------T-GTCAGTg----------------------g
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20271611 11 +  48749331 C--G-----------------------------T-GTCAG----------------------TGG
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1124167 11 -   1948126 C--G-----------------------------T-GTCAGTg----------------------g
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18082249 11 +  45695690 C--G-----------------------------T-GTCAGTg----------------------g
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2817740 11 +   4408762 C--G-----------------------------T-GTCAG----------------------TGG
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998387  6 -  17673402 ---------------------------------------g--ca-gg-----------------a
i Camelus_bactrianus.KN276810.1                          I 1 I 2
s Camelus_dromedarius.KN272107.1                           2330852  6 -   7040546 ---------------------------------------g--ca-gg-----------------a
i Camelus_dromedarius.KN272107.1                         C 0 I 2
s Camelus_ferus.KB017975.1                                  399127  6 -   1652518 ---------------------------------------g--ca-gg-----------------a
i Camelus_ferus.KB017975.1                               C 0 I 2
s Canis_lupus_orion.HG994398.1                            18496163  1 +  63665305 ----------------------------------------------------------------a
i Canis_lupus_orion.HG994398.1                           I 2 C 0
s CanFam4.chr16                                           17795215  6 -  60362399 C--G-----------------------------T-AGC---------------------------
i CanFam4.chr16                                          C 0 I 72
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181278  6 -    185531 c--g-----------------------------t-agc---------------------------
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 I 65
s Canis_lupus_dingo.QKWQ01000480.1                         9030666  6 -   9314153 C--g-----------------------------t-agc---------------------------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 64
s Canis_lupus_familiaris.chr16                            17954925  6 -  59632846 C--G-----------------------------t-agc---------------------------
i Canis_lupus_familiaris.chr16                           C 0 I 69
s Capra_aegagrus.CM003241.1                               18828857 11 +  46296322 C--G-----------------------------T-Gtcagtg----------------------g
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18059577 11 -  44709034 C--G-----------------------------T-Gtcagtg----------------------g
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                     474 11 -     12242 C--A-----------------------------T-AACTA----------------------TGA
i Capromys_pilorides.CapPil_scaffold_65020               I 40 C 0
s Carlito_syrichta.NW_007259797.1                           140176  9 -    496798 A--G-----------------------------T-ATCAa------------------------c
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2387 11 -     11696 C--A-----------------------------T-ATCAA----------------------TGA
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133162  4 +    179628 ---------------------------------------A----------------------TGA
i Castor_canadensis.CasCan_scaffold_2074                 I 12 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     88189 11 +    217609 C--A-----------------------------T-ATCAA----------------------CAA
i Catagonus_wagneri.CatWag_scaffold_2839                 I 10 C 0
s Cavia_aperea.AVPZ01000300.1                             18346976 11 -  23392119 C--A-----------------------------C-AGCaa--ta--------------------a
i Cavia_aperea.AVPZ01000300.1                            I 39 C 0
s Cavia_porcellus.DS562891.1                              18359236 11 -  23407841 C--A-----------------------------C-AGCaa--ta--------------------a
i Cavia_porcellus.DS562891.1                             I 39 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98111 11 +    143979 C--A-----------------------------C-AGCTA----------------------TAA
i Cavia_tschudii.CavTsc_scaffold_8919                    I 39 C 0
s Cephalopachus_bancanus.k141_2037105                         4072  9 -      8605 a--g-----------------------------t-atcga------------------------t
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227359 11 +  27778364 c--g-----------------------------t-atcaa--ca--------------------a
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2077 11 -      3715 C--G-----------------------------T-ATCAA----------------------CAA
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4469752  9 +   4669795 C--C-----------------------------T-GTCcc------------------------t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8301  9 -     19203 C--C-----------------------------T-GTCCC------------------------T
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           2720  9 +      8260 C--C-----------------------------T-GTCCC------------------------T
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           2950  9 +     27781 C--C-----------------------------T-GTCCC------------------------T
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3096  9 -     20310 C--C-----------------------------T-GTCCC------------------------T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6080  9 +     29689 C--C-----------------------------T-GTCCC------------------------T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             433  9 +      9989 C--C-----------------------------T-GTCCC------------------------T
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           8768  9 -     27936 C--C-----------------------------T-GTCCC------------------------T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             8787  9 -     11289 C--C-----------------------------T-GTCCC------------------------T
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811163  9 +  39242232 C--C-----------------------------T-GTCCC------------------------T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21216854  9 -  21565898 C--C-----------------------------T-GTCCC------------------------T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       33974  9 -     53127 C--C-----------------------------T-GTCCC------------------------T
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1266  9 +      7159 C--C-----------------------------T-GTCCC------------------------T
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        8779  9 -     27947 C--C-----------------------------T-GTCCC------------------------T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          8755  9 +     17596 C--C-----------------------------T-GTCCC------------------------T
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39249  9 -     41420 C--C-----------------------------T-GTCCC------------------------T
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4000 11 -      6351 C--A-----------------------------T-ATCAA----------------------AGA
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_1490224                            60995  9 +     61209 A--G-----------------------------G-ATCAA------------------------T
i Cheirogaleus_major.k141_1490224                        C 0 C 0
s Cheirogaleus_medius.k141_1055463                           11375  9 +     57038 a--g-----------------------------g-atcaa------------------------t
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1248017 11 +   2543920 C--A-----------------------------T-AATAAtg----------------------a
i Chinchilla_lanigera.JH722012.1                         I 40 C 0
s Chlorocebus_aethiops.ctg25                              18422718  9 -  18827391 C--C-----------------------------T-GTCCC------------------------T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9161  9 -     50209 C--C-----------------------------T-GTCCC------------------------T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416166  9 + 135778131 C--C-----------------------------T-GTCcc------------------------t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 14627 11 +     19366 C--A-----------------------------T-ATCAG----------------------AGA
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            169730 11 +    839153 C--A-----------------------------T-ATCAG----------------------AGA
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1904689  9 +   2368649 C--C-----------------------------T-GTCcc------------------------t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944307  9 + 200372422 C--C-----------------------------T-GTCCC------------------------T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31201  9 +     84244 C--C-----------------------------T-GTCCC------------------------C
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545462 11 -  53390261 c--a-----------------------------a-aactatg----------------------a
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10025  8 -     20389 C--A-----------------------------T-ATCAA-------------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 2
s Cricetomys_gambianus.CriGam_scaffold_18520                 46360 38 +     63868 AGTTCAATAAGATGAAG-AAATACAGGA-GG--G-AGAAA----------------------CGG
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11663339 49 + 224834208 Agttcaaagagacaaag-aaata-agggagg--g-a-aaa-gga-g-aa-catg-a-gg--g--g
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_603213               623  5 +      1923 --------------------------------------AA----------------------GCA
i Crocidura_indochinensis.CroInd_scaffold_603213         I 2 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             17472 15 -     87169 C--C-----------------------------T-ATCAA------------------TGAAAAA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    834278 11 +   1526836 A--C-----------------------------C-AATAC----------------------TGA
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 41 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  34881 10 +     51376 ---A-----------------------------A-AACTA----------------------TGA
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 40 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2353 11 +      5455 C--A-----------------------------T-AACAA----------------------CAA
i Cuniculus_paca.CunPac_flattened_line_231100            I 39 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793             743 11 +      3576 C--A-----------------------------T-AACAA----------------------TAA
i Dasyprocta_punctata.DasPun_flattened_line_206793       I 39 C 0
s Dasypus_novemcinctus.JH564415.1                            60177 11 +   2246927 C--A-----------------------------T-atcaaag----------------------a
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532350  9 -  12879189 A--G-----------------------------T-ATCAA------------------------T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16810668 11 +  35494412 C--A-----------------------------T-ACCAA----------------------TGA
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8627418 11 +  20541912 C--A-----------------------------t-atcaatg----------------------a
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  668891 11 +   1390856 C--g-----------------------------t-atcaa--ca--------------------a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    1966 11 +    198055 C--G-----------------------------T-ATCAA----------------------CAA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    33805 11 +     67921 C--A-----------------------------T-AACAA----------------------TGA
i Dinomys_branickii.DinBra_scaffold_21862                I 40 C 0
s Dipodomys_ordii.KN672350.1                              18895292  8 +  37912305 a--g-----------------------------a-aagaa-------------------------
i Dipodomys_ordii.KN672350.1                             I 112 I 2
s Dipodomys_stephensi.DipSte_scaffold_75855                  11488  8 +     14536 a--g-----------------------------a-gagag-------------------------
i Dipodomys_stephensi.DipSte_scaffold_75855              I 123 I 2
s Dolichotis_patagonum.DolPat_scaffold_30833                 30998 11 -     42551 C--A-----------------------------C-AGCAA----------------------TAC
i Dolichotis_patagonum.DolPat_scaffold_30833             I 39 C 0
s Eidolon_helvum.KE759718.1                                   6927 11 +     11740 t--a-----------------------------t-atcaatg----------------------a
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       309864 11 +    607251 C--G-----------------------------T-ATCAG----------------------TGG
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1088515  8 +  10337057 T--G-----------------------------T-ATCAG-------------------------
i Elephantulus_edwardii.JH947257.1                       I 16 I 3
s Ellobius_lutescens.LOEQ01008920.1                          12149 50 -    110024 AGTTCAATGAgacaaac-aagta-agggagg--g-aggaa-gga-g-aa--a-g--tg-a-gggg
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 1
s Ellobius_talpinus.LOJH01123422.1                            3099 50 +      5358 AGTTCaatgagacaaag-aagta-agggagg--g-aggaa-gga-g-aa--a-g--tg-a-gggg
i Ellobius_talpinus.LOJH01123422.1                       C 0 I 1
s Enhydra_lutris.KZ291758.1                               16325281 15 -  41312741 C--A-----------------------------t-agcagtgg--g-aa---------------a
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2143276 11 -  14770903 C--A-----------------------------T-AGCaatg----------------------a
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279230 11 +   4378816 C--A-----------------------------T-ATcaa--ca--------------------a
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527051 11 -  39960074 C--A-----------------------------T-ATcaa--ca--------------------a
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29066 11 +    498745 C--A-----------------------------T-ATcaa--ca--------------------a
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3320263  9 -   7059049 a--a-----------------------------g-a--aaa--a--------------------a
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21199401  9 -  21539334 C--C-----------------------------T-GTCCC------------------------T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10344 11 +    133382 C--A-----------------------------T-ACCAA----------------------TGA
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24282 11 -     44125 C--A-----------------------------T-ACCAA----------------------TGA
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Eulemur_albifrons.k141_342033                               9360  9 -     14127 A--G-----------------------------T-ATCAA------------------------T
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                2050  9 -     16928 A--G-----------------------------T-ATCAA------------------------T
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              11081  9 -     25546 A--G-----------------------------T-ATCAA------------------------T
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             8268  9 +     26330 A--G-----------------------------T-ATCAA------------------------T
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                  9525  9 +     23973 A--G-----------------------------T-ATCAA------------------------T
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 8272  9 +     75513 A--G-----------------------------T-ATCAA------------------------T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  6220  9 +     97555 A--G-----------------------------T-ATCAA------------------------T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                             9154  9 +     26496 A--G-----------------------------T-ATCaa------------------------t
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_2367191                                  2159  9 +      2552 A--G-----------------------------T-ATCAA------------------------T
i Eulemur_rufus.k141_2367191                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                               9327  9 +    111500 A--G-----------------------------T-ATCAA------------------------T
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.KN305074.1                                       123 17 -      2052 C--a-----------------------------t-atcaatgg--ggaa--a------------a
i Felis_catus.KN305074.1                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20184889 17 + 205367284 C--a-----------------------------t-atcaatgg--ggaa--a------------a
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_125938                10003 17 -     11347 C--A-----------------------------T-ATCAA----------------TGGGGAAAA
i Felis_nigripes.FelNig_flattened_line_125938            C 0 C 0
s Fukomys_damarensis.KN121974.1                             848023 11 +   3816255 C--A-----------------------------T-aacaatg----------------------a
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galagoides_demidoff.k141_31856                              2141  9 -      3432 a--a-----------------------------c-atcaa------------------------t
i Galagoides_demidoff.k141_31856                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               24935 11 +     26054 A--G-----------------------------T-ATCAA----------------------CAT
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     608368 11 -    660261 C--G-----------------------------T-ATCAG----------------------TGG
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            29774 11 +     49224 a--g-----------------------------g-aagaaag----------------------a
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                               9748  9 -     32273 C--C-----------------------------T-GTCCA------------------------T
i Gorilla_beringei.k141_3596273                          I 114 C 0
s Gorilla_gorilla.LT578341.1                             186331901  9 + 186649187 C--C-----------------------------T-GTCca------------------------t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   29581 11 +     78134 A--A-----------------------------T-AACAA----------------------TGA
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           2408  9 -     19426 A--G-----------------------------T-Atcaa------------------------t
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              7554  9 -     15286 A--G-----------------------------T-ATCAA------------------------T
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                              9173  9 +     18253 A--G-----------------------------T-ATCAA------------------------T
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                          9295  9 -     41752 A--G-----------------------------T-ATCAA------------------------T
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                          9117  9 -     16460 a--g-----------------------------t-atcaa------------------------t
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               230655 15 +    327341 C--C-----------------------------T-ATCAA------------------TGAAAAA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 1
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17062 11 +     36099 C--G-----------------------------T-GTCAG----------------------TGG
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20658914 10 +  22651954 ---A-----------------------------T-AACACtg----------------------a
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_173205                2851 12 -      3357 C-AG-----------------------------C-ATCAG----------------------AGA
i Heterohyrax_brucei.HetBruBak_scaffold_173205           I 118 I 2
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111513 23 +    128679 C--A-----------------------------T-ATCCA----------CCAAAAAAAAAAAAA
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       107896  8 +   1711038 C--A-----------------------------T-Atcca-------------------------
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 2
s Hipposideros_galeritus.HipGal_scaffold_29171               39335  8 +     43066 C--A-----------------------------T-ATCCA-------------------------
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 I 2
s Hoolock_leuconedys.ctg274                                    428735  9 +    630532 C--C-----------------------------T-GTCCA------------------------T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  32749 21 +     55795 C--C-----------------------------T-ATCAA------------TGAAAAAAAAAAA
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19356 11 -    143317 C--A-----------------------------C-AGCAA----------------------TAA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 39 C 0
s Hylobates_agilis.k141_307679                               11653  9 -     15490 C--C-----------------------------T-GTCCA------------------------T
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              53658  9 +     67168 C--C-----------------------------T-GTCCA------------------------T
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189537102  9 - 191637585 C--C-----------------------------T-GTCCA------------------------T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3330201  9 -  11177569 C--C-----------------------------T-GTCCA------------------------T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80432 11 +    135385 C--A-----------------------------G-AATAA----------------------GGA
i Hystrix_cristata.HysCri_scaffold_5660                  I 41 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514000  7 -   7955117 A--G-----------------------------T--TACT-------------------------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 52
s Indri_indri.k141_3655594                                   17522  9 +     31101 A--G-----------------------------T-ATCAA------------------------T
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               21885 11 +     23964 C--A-----------------------------T-ACCAA----------------------TGA
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8270808  8 -   9596543 A--G-----------------------------T-Ttcaa-------------------------
i Jaculus_jaculus.JH725527.1                             C 0 I 2
s Kogia_breviceps.KogBre_flattened_line_192630                1152 11 -      3359 C--A-----------------------------T-ACCAG----------------------TGA
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    11407 11 -     42476 C--A-----------------------------T-AGCGA----------------------TGA
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15519654  9 -  30322482 A--A-----------------------------T-ATCAA------------------------T
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6164  9 -     23766 a--g-----------------------------t-agcaa------------------------t
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24127  9 +     45836 a--g-----------------------------t-agcaa------------------------t
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31017  9 -     32627 a--g-----------------------------t-atcaa------------------------t
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      22217  9 +     54090 A--G-----------------------------T-AGCAA------------------------T
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.APMU01165359.1                      1449 15 -      1663 C--A-----------------------------t-agcagtggaa--a----------------a
i Leptonychotes_weddellii.APMU01165359.1                 C 0 I 6
s Lepus_americanus.LepAme_scaffold_107385                     3090 11 -     14121 A--G-----------------------------T-ATAAA----------------------CGA
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             266966 11 -    662738 C--A-----------------------------T-accaatg----------------------a
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1430918  9 +   1826925 C--C-----------------------------T-GTCCC------------------------T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                            4213967 11 -  43346337 C--A-----------------------------T-atcaga----------------------ca
i Loxodonta_africana.GL010049.1                          C 0 I 2
s Lycaon_pictus.CM007581.1                                17951165 10 -  59628241 C--A-----------------------------t-agc--a--a-g------------------a
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               1107  9 +     40492 C--C-----------------------------T-GTCCC------------------------T
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670367  9 +  60120075 C--C-----------------------------T-GTCCC------------------------T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  6865  9 -     26193 C--C-----------------------------T-GTCCC------------------------T
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            74656  9 -    114318 C--C-----------------------------T-GTCCC------------------------T
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   378  9 -     23192 C--C-----------------------------T-GTCCC------------------------T
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                 9827  9 -     29190 C--C-----------------------------T-GTCCC------------------------T
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18398  9 +     37952 C--C-----------------------------T-GTCCC------------------------T
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833486  9 + 187317192 C--C-----------------------------T-GTCcc------------------------t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452044  9 -  25927173 C--C-----------------------------T-GTCcc------------------------t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74247  9 +     89720 C--C-----------------------------T-GTCCC------------------------T
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1244  9 +     20474 C--C-----------------------------T-GTCCC------------------------T
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1045  9 -     14993 C--C-----------------------------T-GTCCC------------------------T
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  323677  9 -    668171 C--C-----------------------------T-GTCCC------------------------T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15187  9 -     15935 C--C-----------------------------T-GTCCC------------------------T
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               19983  9 -     45290 C--C-----------------------------T-GTCCC------------------------T
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87067 11 +     94391 T--A-----------------------------T-ATCAA----------------------TGA
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23931537  9 -  24302211 C--C-----------------------------T-GTCCC------------------------T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               345717  9 +    752769 C--C-----------------------------T-GTCCC------------------------T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15039 11 +    737560 T--G-----------------------------T-ATCAG----------------------CGA
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              46433 11 -    317179 T--G-----------------------------T-ATCAG----------------------CGA
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33096847  7 -  40650429 A--G-----------------------------T--tact-------------------------
i Marmota_marmota.CZRN01000018.1                         C 0 I 52
s Megaderma_lyra.MegLyr_scaffold_4542                         6342  8 -    207569 C--A-----------------------------C-ACCAA-------------------------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 2
s Mellivora_capensis.MelCap_flattened_line_69365              5522  8 +     13704 C--A-----------------------------T-AGCCG-------------------------
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 6
s Meriones_unguiculatus.MerUng_scaffold_7390                 27651 50 +    140813 AGTTCAGTGAGACAAAG-AAATA-AAGAAGA--G-AGAAA----------GGTGAAAGCCAAGGA
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12177681 49 -  29670104 AGTTCATTGAGACAAAG-AAATA-AGGGAgg--g-a-aaatg-a-g-aa-caa--aa--a-gg-g
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    2553 11 +     10310 C--A-----------------------------T-ACCAA----------------------TGA
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18282383  9 -  93316391 A--A-----------------------------T-ATCAA------------------------T
i Microcebus_murinus.CM007674.1                          I 55 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    14953 11 -    145209 T--G-----------------------------A-ATCAG----------------------GGT
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 7
s Micronycteris_hirsuta.MicHir_scaffold_52381                12934 11 -     19307 C--A-----------------------------A-ATCAA----------------------TGA
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11256080 50 -  27267610 AGttcaatgagacaaag-aaata-agggagg--g-aggaa-gga-g-aa--a-g--tg-a-ggtg
i Microtus_ochrogaster.CM001695.1                        C 0 I 1
s Miniopterus_natalensis.LDJU01000034.1                    1848361 11 +   8254450 C--A-----------------------------T-ATcagtg----------------------a
i Miniopterus_natalensis.LDJU01000034.1                  I 10 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32230 11 +     64694 C--A-----------------------------T-ATCAG----------------------TGA
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 10 C 0
s Miopithecus_ogouensis.k141_534055                           3274  9 -     28506 C--C-----------------------------T-GTCCC------------------------T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        61700 15 -     63350 C--A-----------------------------T-AGCAG------------------TGGAAAA
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 I 2
s Mirza_zaza.k141_1511790                                    38387  9 +     38511 A--G-----------------------------T-ATCAA------------------------T
i Mirza_zaza.k141_1511790                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26058 11 -    437263 C--A-----------------------------T-ACCAA----------------------TGA
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137325 11 -    366855 C--A-----------------------------T-ATCAA----------------------TGA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_61429                  27002 11 -     27816 C--G-----------------------------T-GTCAG----------------------TGG
i Moschus_moschiferus.MosMos_scaffold_61429              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   23828 15 +     37127 C--C-----------------------------T-ATCAA------------------TGAAAAA
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 1
s Murina_feae.MurFea_scaffold_85699                           4425 11 +     14753 C--A-----------------------------T-AGCAA----------------------TGA
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              1788 11 +     14296 A--G-----------------------------C-AAGAA----------------------AGA
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               297166 15 -  14710649 C--A-----------------------------t-agcagtgg--g-aa---------------a
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     70609 11 -     80779 C--A-----------------------------T-AACTA----------------------TGA
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 40 I 8
s Myotis_brandtii.KE162005.1                                277532 11 -  10118263 C--A-----------------------------T-Agcaatg----------------------a
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585104 11 -   6019432 C--A-----------------------------T-AGcaatg----------------------a
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3901321 11 -   4330536 C--A-----------------------------T-AGcaatg----------------------a
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        31871 11 +     33610 C--A-----------------------------T-AGCAA----------------------TGA
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              185591 11 +    196477 A--G-----------------------------T-ATCAG----------------------TGA
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2024970 11 -   3037898 T--T-----------------------------T-caaaa-gg---------------------a
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                                9287  9 +     21681 C--C-----------------------------T-GTCCC------------------------T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20298691 15 +  31847680 C--A-----------------------------t-agcagtggaa--a----------------a
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 2
s Neophocaena_asiaeorientalis.KZ687982.1                   5865014 11 +   7148211 C--A-----------------------------T-ACCAA----------------------TGA
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    755898 11 +    783361 C--A-----------------------------A-CTCAA----------------------TGA
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145361 19 -   9404916 C--A-----------------------------T-Agcaa--ta-g-aag-aa--a-g------a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102569247  9 - 196305487 A--A-----------------------------C-ATCAA------------------------T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_7325916                             4026  9 -      4362 A--A-----------------------------C-ATCAA------------------------T
i Nycticebus_coucang.k141_7325916                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105733278  9 + 199412804 A--A-----------------------------C-ATCAA------------------------T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355201 11 +   3988456 A--G-----------------------------T-GCCAA----------------------TGt
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  745902 11 +  11899542 C--A-----------------------------T-AACTAtg----------------------a
i Octodon_degus.JH651603.1                               I 40 C 0
s Odobenus_rosmarus.KB229312.1                              500218 15 -   2017862 C--A-----------------------------t-agcagtgg--g-aa---------------a
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         144239 11 +    630418 C--A-----------------------------T-ATCAG----------------------TGG
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          76284 11 -    150152 C--G-----------------------------T-ATCAG----------------------TGG
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   16397 50 +     28053 AGTTCAATGAGACAAAG-AAATA-AGGGAGG--G-AGAAA----------GGAGAAAGTGAGGGG
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    74494 50 +    102263 AGTTCAATGAGACAAAG-AAATA-AGGGAGG--G-AGAAA----------GAAGAGTGTGAGGGG
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2780929 11 -  10937097 C--A-----------------------------T-accaatg----------------------a
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6321 11 -     18566 T--G-----------------------------T-ATCAG----------------------AGA
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 I 5
s Oryctolagus_cuniculus.CM000791.1                        67143944 11 + 174332312 a--g-----------------------------t-ataaatg----------------------a
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458121 19 -    559221 C--A-----------------------------T-agcaa--ta-g-aa--a-g-aa--a----g
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17584593 11 +  44047080 C--G-----------------------------T-GTCAG----------------------TGG
i Ovis_aries.CM001607.2                                  I 10 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173014 11 -    191736 C--G-----------------------------T-GTCAG----------------------TGG
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    35672  9 +     80009 C--C-----------------------------T-GTCca------------------------t
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189136622  9 + 189151597 C--C-----------------------------T-GTCca------------------------t
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  140102 17 +    230217 C--A-----------------------------T-ATCGA----------------TGGGGGAAA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                251631 17 +  18783137 C--A-----------------------------T-Atcgatgg--gg--g-aa-----------a
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4710072 17 -   8748460 C--A-----------------------------T-Ctcgatgg--gg--g-aa-----------a
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1263947 11 -   2937107 C--G-----------------------------T-GTCAGtg----------------------g
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183436859  9 + 183742232 C--C-----------------------------T-GTCCC------------------------t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                              921  9 +     20448 C--C-----------------------------T-GTCCC------------------------T
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20557543  9 +  20919399 C--C-----------------------------T-GTCCC------------------------T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_4051466                                   1121  9 -      1598 C--C-----------------------------T-GTCCC------------------------T
i Papio_kindae.k141_4051466                              C 0 C 0
s Papio_papio.k141_802527                                     2953  9 +     27711 C--C-----------------------------T-GTCCC------------------------T
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  2942  9 +      9205 C--C-----------------------------T-GTCCC------------------------T
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272       895 17 -     78924 C--A-----------------------------T-ATCAA----------------TGAAAACAA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 118 C 0
s Perodicticus_ibeanus.k141_1884024                          20186  4 +     32542 -------------------------------------ata------------------------t
i Perodicticus_ibeanus.k141_1884024                      N 0 N 0
s Perodicticus_potto.k141_1176768                             4538  4 -      5172 -------------------------------------ata------------------------t
i Perodicticus_potto.k141_1176768                        N 0 N 0
s Perognathus_longimembris.PerPac_flattened_line_34437       24819 33 +     32600 a--g-----------------------------a-aaggaaggaaggaaggaaggaaggaaggaa
i Perognathus_longimembris.PerPac_flattened_line_34437   I 122 C 0
s Peromyscus_maniculatus.KI615324.1                       18187290 50 -  18517816 AGTTTAATGAGACAAAG-AAAT--Aaggcagg-g-agaaa-gga-g-a-g--tg--tg-a-gggg
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25387 11 -     29689 C--A-----------------------------G-AGCAA----------------------TGA
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               7976 11 +     63832 C--A-----------------------------T-ACCAA----------------------TGA
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           37805  9 +     62158 C--C-----------------------------T-GTCCC------------------------T
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        32534  9 +     89929 C--C-----------------------------T-GTCCC------------------------T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            33950  9 +     51399 C--C-----------------------------T-GTCCC------------------------T
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290169  9 -  14605196 C--C-----------------------------T-GTCcc------------------------t
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_7723             78890 11 +     79650 C--A-----------------------------T-AGCAA----------------------TGA
i Pipistrellus_pipistrellus.PipPip_scaffold_7723         C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           33688 11 +     35617 C--A-----------------------------T-ACCAA----------------------TGA
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189124711  9 + 189387572 C--C-----------------------------T-GTCca------------------------t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9564554  9 +   9816681 C--C-----------------------------T-GTCCA------------------------T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               67443  9 -     81375 C--C-----------------------------T-GTCCC------------------------T
i Presbytis_comata.k141_677006                           I 50 C 0
s Presbytis_mitrata.k141_2342859                              9267  9 +     10147 C--C-----------------------------T-GTCCC------------------------T
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9459 12 -     22811 C-AA-----------------------------C-ATCAG----------------------AGA
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 I 2
s Prolemur_simus.MPIZ01000396.1                            2592303  9 -   4620579 A--G-----------------------------T-ATCAA------------------------T
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     985416  9 +   2598838 A--G-----------------------------T-ATCAA------------------------T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          23708  9 +     38485 A--G-----------------------------T-ATCAA------------------------T
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_1034595                           11795  9 -     12046 A--G-----------------------------T-Atcaa------------------------t
i Propithecus_diadema.k141_1034595                       C 0 C 0
s Propithecus_edwardsi.k141_1176054                          21236  9 +     35766 A--G-----------------------------T-ATCAA------------------------T
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1630595                          16483  9 +     17239 A--G-----------------------------T-ATCAA------------------------T
i Propithecus_perrieri.k141_1630595                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        23242  9 -     67325 A--G-----------------------------T-ATCAA------------------------T
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_1019028                         12958  9 -     13615 A--G-----------------------------T-ATCAA------------------------T
i Propithecus_verreauxi.k141_1019028                     C 0 C 0
s Psammomys_obesus.NESX01036370.1                             5293 50 -     21651 AGTTCAAtgagacaaag-aaata-aagaaga--g-agaaa-gg-tg-aa--a-gcca--a-gg-a
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            10707 11 -     21811 c--a-----------------------------t-atcaatg----------------------a
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36187 15 +     42204 C--A-----------------------------T-AGCAG------------------TGGGAAA
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973200 11 +  28871421 t--a-----------------------------t-atcaa--ta--------------------a
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1134 11 -      8028 t--a-----------------------------t-atcaa--ta--------------------a
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20262609 17 -  38429054 c--a-----------------------------t-atcaatgg--ggaa--a------------a
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                              9271  9 -     91421 C--C-----------------------------T-GTCCC------------------------T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603406  9 +   7812017 C--C-----------------------------T-GTCCC------------------------T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9243  9 -     72585 C--C-----------------------------T-GTCCC------------------------T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4487 11 +     55207 C--A-----------------------------T-ATCAG----------------------TGG
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr8                                 113027555 50 - 133307652 AGGTCATTGAGACAA-GTAAATA-AGGGAgg--gtaaaaatg-aa--aag-a-g-a--ta-g--T
i Rattus_norvegicus.chr8                                 n 153 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        366444  8 -   3329780 C--A-----------------------------T-ATCAA-------------------------
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 2
s Rhinopithecus_bieti.k119_217274                              657  9 -     11128 C--C-----------------------------T-GTCCC------------------------T
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230035  9 - 195417433 C--C-----------------------------T-GTCCc------------------------t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7665743  9 +   7961872 C--C-----------------------------T-GTCCC------------------------T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84180 11 -     96226 T--A-----------------------------T-ATCAC----------------------TGA
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3137 11 +      4321 C--G-----------------------------T-GTCAG----------------------TGG
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    150882 11 -    313613 C--A-----------------------------A-AACAG----------------------TGT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          13786  9 -     19888 C--C-----------------------------T-GTCCC------------------------T
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      20992  9 +     39453 C--C-----------------------------T-GTCCC------------------------T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            1516  9 +     27826 C--C-----------------------------T-GTCCC------------------------T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1036  9 -     19483 C--C-----------------------------T-GTCCC------------------------T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1100  9 +      7198 C--C-----------------------------T-GTCCC------------------------T
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9358  9 +     15514 C--C-----------------------------T-GTCCC------------------------T
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                     9232 50 -     12148 AGTTCAATGAGATGAAG-AAA-C-AG-AAGAGGA-AGAAA----------GGAGAATGTGAGGGG
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187196 11 -    191337 C--A-----------------------------G-ATTAA----------------------TGG
i Solenodon_paradoxus.SolPar_flattened_line_5840         I 15 C 0
s Sorex_araneus.JH798187.1                                13646569  9 -  18376816 c--a-----------------------------a-a--aa--ca--------------------a
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1947624  7 -   3870691 A--G-----------------------------T--TACT-------------------------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 52
s Spilogale_gracilis.SpiGra_flattened_line_13525             26714 15 +     97271 C--A-----------------------------T-AGCAG------------------TGGGGAA
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629               6674 15 -    196729 C--T-----------------------------T-ATCAA------------------TGAAAAA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 1
s Sus_scrofa.CM000828.4                                   62881688 11 -  69701581 C--a-----------------------------t-atcca--ca--------------------a
i Sus_scrofa.CM000828.4                                  I 10 C 0
s Symphalangus_syndactylus.tarseq_199                      1087340  9 -   1523678 C--C-----------------------------T-GTCCA------------------------T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6329 11 +     41958 C--A-----------------------------T-ATCAA----------------------TGA
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 68950 11 +    116680 A--G-----------------------------T-ATCAG----------------------AGA
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      114684 11 -    156842 C--A-----------------------------G-ATCAA----------------------CAA
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383147 11 +    539355 C--A-----------------------------T-ATCAA----------------------CAA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1598868                                9063  9 -     11412 A--G-----------------------------T-ATCAA------------------------T
i Tarsius_lariang.k141_1598868                           C 0 C 0
s Tarsius_wallacei.k141_780063                               13779  9 +     25099 A--G-----------------------------T-ATCAA------------------------T
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422368  9 + 186847797 C--C-----------------------------T-GTCCC------------------------T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              102542 11 +    114563 C--A-----------------------------G-AGCAA----------------------CGA
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   1000 11 +      8208 C--A-----------------------------T-ATCAA----------------------AGA
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78474 11 +    610378 C--A-----------------------------T-ATCAA----------------------TGA
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          5094  9 -     20410 C--C-----------------------------T-GTCCC------------------------T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9288  9 +     15221 C--C-----------------------------T-GTCCC------------------------T
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5194  9 +     19930 C--C-----------------------------T-GTCCC------------------------T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       1622  9 -     19997 C--C-----------------------------T-GTCCC------------------------T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            41742  9 -     60166 C--C-----------------------------T-GTCCC------------------------T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9215  9 -     27529 C--C-----------------------------T-GTCCC------------------------T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9151  9 -     18194 C--C-----------------------------T-GTCCC------------------------T
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           2890  9 -     21137 C--C-----------------------------T-GTCCC------------------------T
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    1590  9 -     10723 C--C-----------------------------T-GTCCC------------------------T
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                          746  9 +      9834 C--C-----------------------------T-GTCCC------------------------T
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19060  9 +     32220 C--C-----------------------------T-GTCCC------------------------T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933158  9 +   6242583 C--C-----------------------------T-GTCCC------------------------T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2404  9 +     20839 C--C-----------------------------T-GTCCC------------------------T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_124071                    172 11 -      2171 C--G-----------------------------T-ATCAG----------------------TGG
i Tragulus_javanicus.TraJav_scaffold_124071              C 0 C 0
s Trichechus_manatus.JH594705.1                            4291870 11 +  10818551 A--C-----------------------------t-atcagag----------------------a
i Trichechus_manatus.JH594705.1                          C 0 I 2
s Tupaia_chinensis.KB320699.1                              2149076 11 +   4065304 G--G-----------------------------t-atcaatg----------------------a
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     2701 11 -     10553 G--G-----------------------------T-ATTAA----------------------TGA
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737176 11 +  33153633 C--A-----------------------------T-accaatg----------------------a
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   51018 11 -     77625 C--A-----------------------------A-AACAA----------------------TTT
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4846414 15 -   5085361 C--A-----------------------------T-agcagtgg--gg--g--------------a
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   6954  9 +     50397 A--G-----------------------------T-ATCaa------------------------t
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              7004  9 +     24756 a--g-----------------------------t-atcaa------------------------t
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5367870 13 -   5488506 C--G-----------------------------t-atcag--ca-gg-----------------a
i Vicugna_pacos.KN270157.1                               C 0 I 2
s Vulpes_lagopus.VulLag_flattened_line_30954                  6795 20 -     43706 c--a-----------------------------t-agcaa--ta-g-aa--a-g-aa--a-g--a
i Vulpes_lagopus.VulLag_flattened_line_30954             I 10 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19153 11 -     24430 A--G-----------------------------T-ATACA----------------------TGA
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1349 15 +      2932 C--A-----------------------------T-AGCAG------------------TGGGAAA
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9439 11 +     63895 A--A-----------------------------T-TCCAA----------------------TAa
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            10868 11 +     12536 C--A-----------------------------T-ACCAA----------------------TGA
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0

a score=0.000000
s hg38.chrUn_KI270753v1                                        319 3 +     62944 G-----A--G
s Acomys_cahirinus.AcoCah_scaffold_12655                     66150 3 +     87051 A-----G--A
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64445 5 -     89534 G-----ACAA
i Allactaga_bullata.AllBul_scaffold_9566                 I 2 C 0
s Allenopithecus_nigroviridis.k141_3361533                    8792 3 -     52922 G-----A--G
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          8717 3 -     28001 G-----A--G
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           8843 3 -      9772 G-----A--G
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                              0 3 -     12518 G-----A--G
i Allochrocebus_solatus.k141_166128                      N 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       6706 3 +     20879 T-----A--C
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_1894080                        5450 3 +      5713 G-----A--T
i Arctocebus_calabarensis.k141_1894080                   C 0 C 0
s Avahi_laniger.k141_765380                                  48667 3 -     92717 g-----a--g
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              49264 3 +     85213 G-----A--G
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                     485 3 -     12242 C-----A--C
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           140185 3 -    496798 g-----a--g
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133166 3 +    179628 G-----A--A
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18346987 3 -  23392119 c-----a--c
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18359247 3 -  23407841 c-----a--c
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98122 3 +    143979 C-----A--C
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         4081 3 -      8605 g-----a--g
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4469761 3 +   4669795 g-----a--g
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8310 3 -     19203 G-----A--G
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           2729 3 +      8260 G-----A--G
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           2959 3 +     27781 G-----A--G
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3105 3 -     20310 G-----A--G
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6089 3 +     29689 G-----A--G
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             442 3 +      9989 G-----A--G
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           8777 3 -     27936 G-----A--G
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             8796 3 -     11289 G-----A--G
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811172 3 +  39242232 G-----A--G
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21216863 3 -  21565898 G-----A--G
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       33983 3 -     53127 G-----A--G
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1275 3 +      7159 G-----A--G
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        8788 3 -     27947 G-----A--G
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          8764 3 +     17596 G-----A--G
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39258 3 -     41420 G-----A--G
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Cheirogaleus_major.k141_1490224                            61004 3 +     61209 G-----A--G
i Cheirogaleus_major.k141_1490224                        C 0 C 0
s Cheirogaleus_medius.k141_1055463                           11384 3 +     57038 g-----g--g
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1248028 3 +   2543920 c-----a--c
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18422727 3 -  18827391 G-----A--G
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9170 3 -     50209 G-----A--G
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416175 3 + 135778131 g-----a--g
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1904698 3 +   2368649 g-----a--g
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944316 3 + 200372422 G-----A--G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31210 3 +     84244 G-----A--G
i Colobus_polykomos.k141_906115                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 46398 3 +     63868 A-----A--A
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11663388 3 + 224834208 a-----g--a
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    834289 3 +   1526836 G-----G--A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  34891 3 +     51376 C-----A--C
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2364 3 +      5455 C-----A--C
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793             754 3 +      3576 C-----A--C
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532359 3 -  12879189 G-----A--G
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    33816 3 +     67921 C-----A--C
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31009 3 -     42551 C-----A--C
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          12200 1 -    110024 ---------a
i Ellobius_lutescens.LOEQ01008920.1                      I 1 C 0
s Ellobius_talpinus.LOJH01123422.1                            3150 1 +      5358 ---------a
i Ellobius_talpinus.LOJH01123422.1                       I 1 C 0
s Erythrocebus_patas.Contig38                             21199410 3 -  21539334 G-----A--G
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                               9369 3 -     14127 G-----A--G
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                2059 3 -     16928 G-----A--G
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              11090 3 -     25546 G-----A--G
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             8277 3 +     26330 G-----A--G
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                  9534 3 +     23973 G-----A--G
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 8281 3 +     75513 G-----A--G
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  6229 3 +     97555 G-----A--G
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                             9163 3 +     26496 g-----a--g
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_2367191                                  2168 3 +      2552 G-----A--G
i Eulemur_rufus.k141_2367191                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                               9336 3 +    111500 G-----A--G
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Fukomys_damarensis.KN121974.1                             848034 3 +   3816255 c-----a--c
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galagoides_demidoff.k141_31856                              2150 3 -      3432 g-----a--a
i Galagoides_demidoff.k141_31856                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               24946 3 +     26054 G-----A--G
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            29785 3 +     49224 g-----a--a
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                               9757 3 -     32273 G-----A--G
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186331910 3 + 186649187 g-----a--g
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   29592 3 +     78134 G-----A--A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           2417 3 -     19426 g-----a--g
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              7563 3 -     15286 g-----a--g
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                              9182 3 +     18253 G-----a--g
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                          9304 3 -     41752 g-----a--g
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                          9126 3 -     16460 g-----a--g
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20658924 3 +  22651954 c-----a--c
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hoolock_leuconedys.ctg274                                    428744 3 +    630532 G-----A--G
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19367 3 -    143317 C-----A--C
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_307679                               11662 3 -     15490 G-----A--G
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              53667 3 +     67168 G-----A--G
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189537111 3 - 191637585 G-----A--G
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3330210 3 -  11177569 G-----A--G
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80443 3 +    135385 C-----A--C
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Indri_indri.k141_3655594                                   17531 4 +     31101 G-----A-Gg
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8270818 5 -   9596543 g-----aaaa
i Jaculus_jaculus.JH725527.1                             I 2 C 0
s Lemur_catta.scaffold_24                                 15519663 3 -  30322482 G-----A--G
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6173 3 -     23766 g-----a--g
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24136 3 +     45836 g-----a--g
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31026 3 -     32627 g-----a--a
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      22226 3 +     54090 G-----A--G
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     3101 3 -     14121 G-----A--A
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1430927 3 +   1826925 G-----A--G
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                               1116 3 +     40492 G-----A--G
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670376 3 +  60120075 G-----A--G
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  6874 3 -     26193 G-----A--G
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            74665 3 -    114318 G-----A--G
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   387 3 -     23192 G-----A--G
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                 9836 3 -     29190 G-----A--G
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18407 3 +     37952 G-----A--G
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833495 3 + 187317192 g-----a--g
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452053 3 -  25927173 g-----a--g
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74256 3 +     89720 G-----A--G
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1253 3 +     20474 G-----A--G
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1054 3 -     14993 G-----A--G
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  323686 3 -    668171 G-----A--G
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15196 3 -     15935 G-----A--G
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               19992 3 -     45290 G-----A--G
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23931546 3 -  24302211 G-----A--G
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               345726 3 +    752769 G-----A--G
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 27701 3 +    140813 A-----G--A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12177730 3 -  29670104 a-----g--a
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Microcebus_murinus.CM007674.1                           18282392 3 -  93316391 G-----A--G
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11256131 1 -  27267610 ---------a
i Microtus_ochrogaster.CM001695.1                        I 1 C 0
s Miopithecus_ogouensis.k141_534055                           3283 3 -     28506 G-----A--G
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirza_zaza.k141_1511790                                    38396 3 +     38511 G-----A--G
i Mirza_zaza.k141_1511790                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              1799 3 +     14296 A-----A--G
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     70628 3 -     80779 C-----A--C
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 8 C 0
s Nannospalax_galili.KL204047.1                            2024981 3 -   3037898 c-----a--a
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                                9296 3 +     21681 G-----A--G
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nycticebus_bengalensis.LG01                            102569256 3 - 196305487 G-----a--g
i Nycticebus_bengalensis.LG01                            C 0 I 16
s Nycticebus_coucang.k141_7325916                             4035 3 -      4362 G-----A--G
i Nycticebus_coucang.k141_7325916                        C 0 I 16
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105733287 3 + 199412804 G-----A--G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 16
s Ochotona_princeps.JH802162.1                             1355212 3 +   3988456 g-----a--a
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  745913 3 +  11899542 c-----a--c
i Octodon_degus.JH651603.1                               C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   16447 1 +     28053 G---------
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 1
s Onychomys_torridus.OnyTor_scaffold_2986                    74544 3 +    102263 A-----A--A
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67143955 3 + 174332312 g-----a--a
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Pan_paniscus.KQ411613.1                                    35681 3 +     80009 g-----a--g
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189136631 3 + 189151597 g-----a--g
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                183436868 3 + 183742232 g-----a--g
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                              930 3 +     20448 G-----A--G
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20557552 3 +  20919399 G-----A--G
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_4051466                                   1130 3 -      1598 G-----A--G
i Papio_kindae.k141_4051466                              C 0 C 0
s Papio_papio.k141_802527                                     2962 3 +     27711 G-----A--G
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  2951 3 +      9205 G-----A--G
i Papio_ursinus.k141_3428135                             C 0 C 0
s Perodicticus_ibeanus.k141_855320                               0 2 +     13100 ------a--t
i Perodicticus_ibeanus.k141_855320                       N 0 I 257
s Perodicticus_potto.k141_1092827                                0 2 -      1096 ------c--t
i Perodicticus_potto.k141_1092827                        N 0 I 306
s Perognathus_longimembris.PerPac_flattened_line_34437       24852 3 +     32600 g-----g--a
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18187340 3 -  18517816 a-----a--a
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25398 3 -     29689 C-----A--C
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Piliocolobus_badius.k141_1234363                           37814 3 +     62158 G-----A--G
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        32543 3 +     89929 G-----A--G
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            33959 3 +     51399 G-----A--G
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290178 3 -  14605196 g-----a--g
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189124720 3 + 189387572 g-----a--g
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9564563 3 +   9816681 G-----A--G
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               67452 3 -     81375 G-----A--G
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9276 3 +     10147 G-----A--G
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2592312 3 -   4620579 G-----a--g
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     985425 3 +   2598838 g-----a--g
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          23717 3 +     38485 G-----A--G
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_1034595                           11804 3 -     12046 g-----a--g
i Propithecus_diadema.k141_1034595                       C 0 C 0
s Propithecus_edwardsi.k141_1176054                          21245 3 +     35766 G-----A--G
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1630595                          16492 3 +     17239 G-----A--G
i Propithecus_perrieri.k141_1630595                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        23251 3 -     67325 G-----A--G
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_1019028                         12967 3 -     13615 G-----a--g
i Propithecus_verreauxi.k141_1019028                     C 0 C 0
s Psammomys_obesus.NESX01036370.1                             5343 3 -     21651 a-----g--a
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pygathrix_cinerea.k141_1153803                              9280 3 -     91421 G-----A--G
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603415 3 +   7812017 G-----A--G
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9252 3 -     72585 G-----A--G
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr8                                 113027605 3 - 133307652 A-----G--G
i Rattus_norvegicus.chr8                                 C 0 C 0
s Rhinopithecus_bieti.k119_217274                              666 3 -     11128 G-----A--G
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230044 3 - 195417433 g-----a--g
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7665752 3 +   7961872 G-----A--G
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Semnopithecus_entellus.k141_11662                          13795 3 -     19888 G-----A--G
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21001 3 +     39453 G-----A--G
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            1525 3 +     27826 G-----A--G
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1045 3 -     19483 G-----A--G
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1109 3 +      7198 G-----A--G
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9367 3 +     15514 G-----A--G
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                     9282 3 -     12148 G-----A--A
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1087349 3 -   1523678 G-----A--G
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_1598868                                9072 3 -     11412 G-----A--G
i Tarsius_lariang.k141_1598868                           C 0 C 0
s Tarsius_wallacei.k141_780063                               13788 3 +     25099 G-----A--G
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422377 3 + 186847797 g-----a--g
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              102553 3 +    114563 C-----A--C
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Trachypithecus_auratus.k141_722599                          5103 3 -     20410 G-----A--G
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9297 3 +     15221 G-----A--G
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5203 3 +     19930 G-----A--G
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       1631 3 -     19997 G-----A--G
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            41751 3 -     60166 G-----A--G
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9224 3 -     27529 G-----A--G
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9160 3 -     18194 G-----A--G
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           2899 3 -     21137 G-----A--G
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    1599 3 -     10723 G-----A--G
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                          755 3 +      9834 G-----A--G
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19069 3 +     32220 G-----A--G
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933167 3 +   6242583 G-----A--G
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2413 3 +     20839 G-----A--G
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2149087 3 +   4065304 g-----a--g
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     2712 1 -     10553 G---------
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Varecia_rubra.k141_590885                                   6963 3 +     50397 g-----a--a
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              7013 3 +     24756 g-----a--a
i Varecia_variegata.k141_1128296                         C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19164 8 -     24430 TTCagaa--a
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9450 5 +     63895 g-----acaa
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Ziphius_cavirostris.ZipCav_flattened_line_71469            10879 0 +     12536 C
e Zalophus_californianus.ZalCal_flattened_line_63728          1364 0 +      2932 C
e Vulpes_lagopus.VulLag_flattened_line_30954                  6815 0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5367883 2 -   5488506 I
e Ursus_maritimus.KK499267.1                               4846429 0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   51029 0 -     77625 C
e Tursiops_truncatus.MRVK01000835.1                       15737187 0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4291881 2 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_124071                    183 0 -      2171 C
e Tonatia_saurophila.TonSau_scaffold_294                     78485 0 +    610378 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   1011 0 +      8208 C
e Tapirus_terrestris.TapTer_scaffold_755                    383158 0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      114695 0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 68961 0 +    116680 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                 6340 0 +     41958 C
e Sus_scrofa.CM000828.4                                   62881699 0 -  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629               6689 1 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             26729 0 +     97271 C
e Spermophilus_dauricus.KZ294078.1                         1947631 52 -   3870691 I
e Sorex_araneus.JH798187.1                                13646578 0 -  18376816 C
e Solenodon_paradoxus.SolPar_flattened_line_5840            187207 0 -    191337 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    150893 0 -    313613 C
e Saiga_tatarica.SaiTat_scaffold_373180                       3148 0 +      4321 C
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                84191 0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        366452 2 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4498 0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20262626 0 -  38429054 C
e Pteropus_vampyrus.KN534172.1                                1145 0 -      8028 C
e Pteropus_alecto.KB030862.1                              22973211 0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         36202 0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            10718 0 -     21811 C
e Procavia_capensis.ProCapCap_scaffold_85530                  9471 2 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           33699 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_7723             78901 0 +     79650 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               7987 0 +     63832 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272       912 0 -     78924 C
e Pantholops_hodgsonii.KE114653.1                          1263958 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4710089 0 -   8748460 C
e Panthera_pardus.KV860321.1                                251648 0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  140119 0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      173025 0 -    191736 C
e Ovis_aries.CM001607.2                                   17584604 0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       458140 0 -    559221 C
e Orycteropus_afer.OryAfe_flattened_line_144387               6332 5 -     18566 I
e Orcinus_orca.KB316932.1                                  2780940 0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          76295 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         144250 0 +    630418 C
e Odobenus_rosmarus.KB229312.1                              500233 0 -   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9145380 0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    755909 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5865025 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20298706 2 +  31847680 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              185602 0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        31882 0 +     33610 C
e Myotis_lucifugus.GL429869.1                              3901332 0 -   4330536 C
e Myotis_davidii.KB100139.1                                1585115 0 -   6019432 C
e Myotis_brandtii.KE162005.1                                277543 0 -  10118263 C
e Mustela_putorius.JH418006.1                               297181 0 -  14710649 C
e Murina_feae.MurFea_scaffold_85699                           4436 0 +     14753 C
e Mungos_mungo.MunMun_flattened_line_23663                   23843 1 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_61429                  27013 0 -     27816 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 137336 0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    26069 0 -    437263 C
e Mirounga_angustirostris.MirAng_flattened_line_22144        61715 2 -     63350 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             32241 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1848372 0 +   8254450 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                12945 0 -     19307 C
e Microgale_talazaci.MicTal_scaffold_6613                    14964 7 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    2564 0 +     10310 C
e Mellivora_capensis.MelCap_flattened_line_69365              5530 6 +     13704 I
e Megaderma_lyra.MegLyr_scaffold_4542                         6350 2 -    207569 I
e Marmota_marmota.CZRN01000018.1                          33096854 52 -  40650429 I
e Manis_pentadactyla.KN006162.1                              46444 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              15050 0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 87078 0 +     94391 C
e Lycaon_pictus.CM007581.1                                17951175 0 -  59628241 C
e Loxodonta_africana.GL010049.1                            4213978 2 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             266977 0 -    662738 C
e Leptonychotes_weddellii.APMU01165359.1                      1464 6 -      1663 I
e Lasiurus_borealis.LasBor_scaffold_32767                    11418 0 -     42476 C
e Kogia_breviceps.KogBre_flattened_line_192630                1163 0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               21896 0 +     23964 C
e Ictidomys_tridecemlineatus.JH393364.1                    7514007 52 -   7955117 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  32770 0 +     55795 C
e Hipposideros_galeritus.HipGal_scaffold_29171               39343 2 +     43066 I
e Hipposideros_armiger.JXIK01000431.1                       107904 2 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               111536 0 +    128679 C
e Heterohyrax_brucei.HetBruBak_scaffold_173205                2863 2 -      3357 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17073 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               230670 1 +    327341 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608379 0 -    660261 C
e Felis_nigripes.FelNig_flattened_line_125938                10020 0 -     11347 C
e Felis_catus_fca126.CM031415.1                           20184906 0 + 205367284 C
e Eubalaena_japonica.EubJap_flattened_line_31514             24293 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           10355 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3320272 0 -   7059049 C
e Equus_przewalskii.KK951119.1                               29077 0 +    498745 C
e Equus_caballus.CM000403.2                               18527062 0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1279241 0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2143287 0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16325296 0 -  41312741 C
e Elephantulus_edwardii.JH947257.1                         1088523 3 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       309875 0 +    607251 C
e Eidolon_helvum.KE759718.1                                   6938 0 +     11740 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  11496 2 +     14536 I
e Dipodomys_ordii.KN672350.1                              18895300 2 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    1977 0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  668902 0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8627429 0 +  20541912 C
e Delphinapterus_leucas.KZ290073.1                        16810679 0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            60188 0 +   2246927 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129             17487 0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_603213               628 0 +      1923 C
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          10033 2 -     20389 I
e Condylura_cristata.JH655891.1                           17545473 0 -  53390261 C
e Choloepus_hoffmanni.KN194906.1                            169741 0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 14638 0 +     19366 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            4011 0 -      6351 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2088 0 -      3715 C
e Catagonus_wagneri.CatWag_scaffold_2839                     88200 0 +    217609 C
e Carollia_perspicillata.CarPer_scaffold_92756                2398 0 -     11696 C
e Capra_hircus.CM004588.1                                 18059588 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18828868 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18496164 0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17954931 69 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9030672 64 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    181284 65 -    185531 I
e CanFam4.chr16                                           17795221 72 -  60362399 I
e Camelus_ferus.KB017975.1                                  399133 2 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2330858 2 -   7040546 I
e Camelus_bactrianus.KN276810.1                            9998393 2 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2817751 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18082260 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1124178 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20271622 0 +  48749331 C
e Bison_bison.KN261452.1                                    198423 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    25673 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         1509 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15191043 0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  1980 0 +     43469 C
e Antilocapra_americana.AntAmePen_scaffold_12469             97202 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      182628 0 +    412891 C
e Ammotragus_lervia.NIVO01071767.1                          674751 0 -   2318259 C
e Ailurus_fulgens.LNAC01001112.1                             74717 0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9506430 0 -  29979442 C
e Acinonyx_jubatus.LLWD01001279.1                           816477 0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                        322 2 +     62944 GA
s Acinonyx_jubatus.LLWD01001279.1                           816477 1 -   1699592 -a
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     66153 2 +     87051 AG
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506430 1 -  29979442 -a
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             74717 1 -    347723 -G
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64450 2 -     89534 AG
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    8795 2 -     52922 GA
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          8720 2 -     28001 GA
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           8846 2 -      9772 GA
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                              3 2 -     12518 GA
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          674751 1 -   2318259 -g
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      182628 1 +    412891 -A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97202 1 -    100397 -G
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       6709 2 +     20879 AT
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_1894080                        5453 2 +      5713 Ga
i Arctocebus_calabarensis.k141_1894080                   C 0 I 1
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  1980 1 +     43469 -A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  48670 1 -     92717 -g
i Avahi_laniger.k141_765380                              C 0 I 92
s Avahi_peyrierasi.k141_1424874                              49267 1 +     85213 -G
i Avahi_peyrierasi.k141_1424874                          C 0 I 92
s Balaenoptera_acutorostrata.KI537508.1                   15191043 1 +  23207421 -a
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         1509 1 -     18090 -a
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    25673 1 +     34529 -G
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    198423 1 -    288883 -g
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20271622 1 +  48749331 -G
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1124178 1 -   1948126 -g
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18082260 1 +  45695690 -g
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2817751 1 +   4408762 -G
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998395 1 -  17673402 -a
i Camelus_bactrianus.KN276810.1                          I 2 I 1
s Camelus_dromedarius.KN272107.1                           2330860 1 -   7040546 -a
i Camelus_dromedarius.KN272107.1                         I 2 C 0
s Camelus_ferus.KB017975.1                                  399135 1 -   1652518 -a
i Camelus_ferus.KB017975.1                               I 2 I 1
s Canis_lupus_orion.HG994398.1                            18496164 1 +  63665305 -a
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18828868 1 +  46296322 -g
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18059588 1 -  44709034 -g
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                     488 2 -     12242 AA
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           140188 2 -    496798 aa
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2398 1 -     11696 -A
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133169 2 +    179628 AG
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     88200 1 +    217609 -A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18346990 2 -  23392119 aa
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18359250 2 -  23407841 aa
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98125 2 +    143979 AA
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         4084 2 -      8605 aa
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227370 1 +  27778364 -c
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2088 1 -      3715 -C
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4469764 2 +   4669795 ga
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8313 2 -     19203 GA
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           2732 2 +      8260 GA
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           2962 2 +     27781 GA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3108 2 -     20310 GA
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6092 2 +     29689 GA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             445 2 +      9989 GA
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           8780 2 -     27936 GA
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             8799 2 -     11289 GA
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811175 2 +  39242232 GA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21216866 2 -  21565898 GA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       33986 2 -     53127 GA
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1278 2 +      7159 GA
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        8791 2 -     27947 GA
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          8767 2 +     17596 GA
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39261 2 -     41420 GA
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4011 1 -      6351 -A
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_1490224                            61007 1 +     61209 -g
i Cheirogaleus_major.k141_1490224                        C 0 I 102
s Cheirogaleus_medius.k141_1055463                           11387 1 +     57038 -g
i Cheirogaleus_medius.k141_1055463                       C 0 I 98
s Chinchilla_lanigera.JH722012.1                           1248031 2 +   2543920 aa
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18422730 2 -  18827391 GA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9173 2 -     50209 GA
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416178 2 + 135778131 ga
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 14638 1 +     19366 -A
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            169741 1 +    839153 -A
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1904701 2 +   2368649 ga
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944319 2 + 200372422 GA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31213 2 +     84244 GA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545473 1 -  53390261 -a
i Condylura_cristata.JH655891.1                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 46401 2 +     63868 AG
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11663391 2 + 224834208 ag
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_603213               628 1 +      1923 -T
i Crocidura_indochinensis.CroInd_scaffold_603213         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             17487 1 -     87169 -T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  34894 2 +     51376 AA
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2367 2 +      5455 AA
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793             757 2 +      3576 AA
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            60188 1 +   2246927 -a
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532362 2 -  12879189 GA
i Daubentonia_madagascariensis.ctg71                     C 0 I 20
s Delphinapterus_leucas.KZ290073.1                        16810679 1 +  35494412 -A
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8627429 1 +  20541912 -a
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  668902 1 +   1390856 -a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    1977 1 +    198055 -C
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    33819 2 +     67921 AA
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31012 2 -     42551 AA
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE759718.1                                   6938 1 +     11740 -a
i Eidolon_helvum.KE759718.1                              C 0 I 4
s Elaphurus_davidianus.JRFZ01104969.1                       309875 1 +    607251 -G
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1088526 1 +  10337057 -A
i Elephantulus_edwardii.JH947257.1                       I 3 C 0
s Ellobius_lutescens.LOEQ01008920.1                          12201 2 -    110024 ag
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01123422.1                            3151 2 +      5358 ag
i Ellobius_talpinus.LOJH01123422.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16325296 1 -  41312741 -a
i Enhydra_lutris.KZ291758.1                              C 0 I 1
s Eptesicus_fuscus.JH977646.1                              2143287 1 -  14770903 -t
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279241 1 +   4378816 -a
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527062 1 -  39960074 -a
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29077 1 +    498745 -a
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3320272 1 -   7059049 -a
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21199413 2 -  21539334 GA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10355 1 +    133382 -A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24293 1 -     44125 -A
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Eulemur_albifrons.k141_342033                               9372 1 -     14127 -A
i Eulemur_albifrons.k141_342033                          C 0 I 59
s Eulemur_collaris.k141_377015                                2062 1 -     16928 -A
i Eulemur_collaris.k141_377015                           C 0 I 59
s Eulemur_coronatus.k141_885031                              11093 1 -     25546 -A
i Eulemur_coronatus.k141_885031                          C 0 I 59
s Eulemur_flavifrons.k141_1184614                             8280 1 +     26330 -A
i Eulemur_flavifrons.k141_1184614                        C 0 I 59
s Eulemur_fulvus.k141_544389                                  9537 1 +     23973 -A
i Eulemur_fulvus.k141_544389                             C 0 I 59
s Eulemur_macaco.k141_1562045                                 8284 1 +     75513 -A
i Eulemur_macaco.k141_1562045                            C 0 I 59
s Eulemur_mongoz.k141_232305                                  6232 1 +     97555 -A
i Eulemur_mongoz.k141_232305                             C 0 I 59
s Eulemur_rubriventer.k141_571033                             9166 1 +     26496 -a
i Eulemur_rubriventer.k141_571033                        C 0 I 59
s Eulemur_rufus.k141_2367191                                  2171 1 +      2552 -A
i Eulemur_rufus.k141_2367191                             C 0 I 59
s Eulemur_sanfordi.k141_1122526                               9339 1 +    111500 -A
i Eulemur_sanfordi.k141_1122526                          C 0 I 59
s Felis_catus.KN305074.1                                       140 1 -      2052 -a
i Felis_catus.KN305074.1                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20184906 1 + 205367284 -a
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_125938                10020 1 -     11347 -A
i Felis_nigripes.FelNig_flattened_line_125938            C 0 C 0
s Fukomys_damarensis.KN121974.1                             848037 2 +   3816255 aa
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galagoides_demidoff.k141_31856                              2153 2 -      3432 ga
i Galagoides_demidoff.k141_31856                         C 0 I 1
s Galeopterus_variegatus.GalVar_scaffold_56069               24949 2 +     26054 AA
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     608379 1 -    660261 -G
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            29788 2 +     49224 ag
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                               9760 2 -     32273 GA
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186331913 2 + 186649187 ga
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   29595 2 +     78134 AG
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           2420 1 -     19426 -a
i Hapalemur_alaotrensis.k141_170648                      C 0 I 63
s Hapalemur_gilberti.k141_488810                              7566 1 -     15286 -a
i Hapalemur_gilberti.k141_488810                         C 0 I 63
s Hapalemur_griseus.k141_1511508                              9185 1 +     18253 -a
i Hapalemur_griseus.k141_1511508                         C 0 I 63
s Hapalemur_meridionalis.k141_248335                          9307 1 -     41752 -a
i Hapalemur_meridionalis.k141_248335                     C 0 I 63
s Hapalemur_occidentalis.k141_907772                          9129 1 -     16460 -a
i Hapalemur_occidentalis.k141_907772                     C 0 I 63
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17073 1 +     36099 -G
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20658927 2 +  22651954 aa
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_173205                2865 1 -      3357 -A
i Heterohyrax_brucei.HetBruBak_scaffold_173205           I 2 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111536 1 +    128679 -A
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hoolock_leuconedys.ctg274                                    428747 2 +    630532 GA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  32770 1 +     55795 -A
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19370 2 -    143317 AA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_307679                               11665 2 -     15490 GA
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              53670 2 +     67168 GC
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189537114 2 - 191637585 GA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3330213 2 -  11177569 GA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80446 2 +    135385 AA
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Indri_indri.k141_3655594                                   17535 1 +     31101 -a
i Indri_indri.k141_3655594                               C 0 I 84
s Inia_geoffrensis.IniGeo_flattened_line_48101               21896 1 +     23964 -A
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8270823 2 -   9596543 ag
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1163 1 -      3359 -A
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    11418 1 -     42476 -T
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15519666 1 -  30322482 -A
i Lemur_catta.scaffold_24                                C 0 I 63
s Lepilemur_ankaranensis.k141_596936                          6176 1 -     23766 -g
i Lepilemur_ankaranensis.k141_596936                     C 0 I 66
s Lepilemur_dorsalis.k141_577674                             24139 1 +     45836 -g
i Lepilemur_dorsalis.k141_577674                         C 0 I 50
s Lepilemur_ruficaudatus.k141_420445                         31029 1 -     32627 -g
i Lepilemur_ruficaudatus.k141_420445                     C 0 I 70
s Lepilemur_septentrionalis.k141_185316                      22229 1 +     54090 -G
i Lepilemur_septentrionalis.k141_185316                  C 0 I 48
s Leptonychotes_weddellii.APMU01165359.1                      1470 1 -      1663 -a
i Leptonychotes_weddellii.APMU01165359.1                 I 6 C 0
s Lepus_americanus.LepAme_scaffold_107385                     3104 1 -     14121 -A
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             266977 1 -    662738 -a
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1430930 2 +   1826925 GA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                            4213980 1 -  43346337 -a
i Loxodonta_africana.GL010049.1                          I 2 C 0
s Lycaon_pictus.CM007581.1                                17951175 1 -  59628241 -a
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               1119 2 +     40492 GA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670379 2 +  60120075 GA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  6877 2 -     26193 GA
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            74668 2 -    114318 GA
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   390 2 -     23192 GA
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                 9839 2 -     29190 GA
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18410 2 +     37952 GA
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833498 2 + 187317192 ga
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452056 2 -  25927173 ga
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74259 2 +     89720 GA
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1256 2 +     20474 GA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1057 2 -     14993 GA
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  323689 2 -    668171 GA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15199 2 -     15935 GA
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               19995 2 -     45290 GA
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87078 1 +     94391 -A
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 4
s Mandrillus_leucophaeus.scaffold280                      23931549 2 -  24302211 GA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               345729 2 +    752769 GA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15050 1 +    737560 -A
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              46444 1 -    317179 -A
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              5536 1 +     13704 -A
i Mellivora_capensis.MelCap_flattened_line_69365         I 6 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 27704 2 +    140813 AG
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12177733 2 -  29670104 ag
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    2564 1 +     10310 -A
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18282395 1 -  93316391 -T
i Microcebus_murinus.CM007674.1                          C 0 I 100
s Microgale_talazaci.MicTal_scaffold_6613                    14971 1 -    145209 -A
i Microgale_talazaci.MicTal_scaffold_6613                I 7 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                12945 1 -     19307 -A
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11256132 2 -  27267610 ag
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1848372 1 +   8254450 -t
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32241 1 +     64694 -T
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3286 2 -     28506 GA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        61717 1 -     63350 -A
i Mirounga_angustirostris.MirAng_flattened_line_22144    I 2 C 0
s Mirza_zaza.k141_1511790                                    38399 1 +     38511 -T
i Mirza_zaza.k141_1511790                                C 0 I 93
s Monodon_monoceros.MonMon_M_scaffold_103                    26069 1 -    437263 -A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137336 1 -    366855 -A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_61429                  27013 1 -     27816 -G
i Moschus_moschiferus.MosMos_scaffold_61429              C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           4436 1 +     14753 -T
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              1802 2 +     14296 AG
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               297181 1 -  14710649 -a
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     70631 2 -     80779 AA
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                277543 1 -  10118263 -t
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585115 1 -   6019432 -t
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3901332 1 -   4330536 -t
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        31882 1 +     33610 -T
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              185602 1 +    196477 -A
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2024984 2 -   3037898 ag
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                                9299 2 +     21681 GA
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20298708 1 +  31847680 -a
i Neomonachus_schauinslandi.NINY01007730.1               I 2 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865025 1 +   7148211 -A
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    755909 1 +    783361 -A
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145380 1 -   9404916 -a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Ochotona_princeps.JH802162.1                             1355215 2 +   3988456 ga
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  745916 2 +  11899542 aa
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                              500233 1 -   2017862 -a
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         144250 1 +    630418 -G
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          76295 1 -    150152 -G
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    74547 2 +    102263 AG
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2780940 1 -  10937097 -a
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6337 1 -     18566 -A
i Orycteropus_afer.OryAfe_flattened_line_144387          I 5 C 0
s Oryctolagus_cuniculus.CM000791.1                        67143958 1 + 174332312 -a
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458140 1 -    559221 -a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17584604 1 +  44047080 -G
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173025 1 -    191736 -G
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    35684 2 +     80009 ga
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189136634 2 + 189151597 ga
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  140119 1 +    230217 -A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 2
s Panthera_pardus.KV860321.1                                251648 1 +  18783137 -a
i Panthera_pardus.KV860321.1                             C 0 I 2
s Panthera_tigris.KE722367.1                               4710089 1 -   8748460 -a
i Panthera_tigris.KE722367.1                             C 0 I 2
s Pantholops_hodgsonii.KE114653.1                          1263958 1 -   2937107 -g
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183436871 2 + 183742232 ga
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                              933 2 +     20448 GA
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20557555 2 +  20919399 GA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_4051466                                   1133 2 -      1598 GA
i Papio_kindae.k141_4051466                              C 0 C 0
s Papio_papio.k141_802527                                     2965 2 +     27711 GA
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  2954 2 +      9205 GA
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272       912 1 -     78924 -A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                             259 2 +     13100 ga
i Perodicticus_ibeanus.k141_855320                       I 257 I 1
s Perodicticus_potto.k141_1092827                              308 2 -      1096 aa
i Perodicticus_potto.k141_1092827                        I 306 I 1
s Perognathus_longimembris.PerPac_flattened_line_34437       24855 2 +     32600 ag
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18187343 2 -  18517816 ag
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25401 2 -     29689 AA
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               7987 1 +     63832 -A
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           37817 2 +     62158 GA
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        32546 2 +     89929 GA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            33962 2 +     51399 GA
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290181 2 -  14605196 ga
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_7723             78901 1 +     79650 -T
i Pipistrellus_pipistrellus.PipPip_scaffold_7723         C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           33699 1 +     35617 -A
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189124723 2 + 189387572 ga
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9564566 2 +   9816681 GA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               67455 2 -     81375 GA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9279 2 +     10147 GA
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9473 1 -     22811 -A
i Procavia_capensis.ProCapCap_scaffold_85530             I 2 C 0
s Prolemur_simus.MPIZ01000396.1                            2592315 1 -   4620579 -a
i Prolemur_simus.MPIZ01000396.1                          C 0 I 63
s Propithecus_coquerelli.NW_012148875.1                     985428 1 +   2598838 -g
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 64
s Propithecus_coronatus.k141_347390                          23720 1 +     38485 -G
i Propithecus_coronatus.k141_347390                      C 0 I 64
s Propithecus_diadema.k141_1034595                           11807 1 -     12046 -g
i Propithecus_diadema.k141_1034595                       C 0 I 64
s Propithecus_edwardsi.k141_1176054                          21248 1 +     35766 -G
i Propithecus_edwardsi.k141_1176054                      C 0 I 64
s Propithecus_perrieri.k141_1630595                          16495 1 +     17239 -G
i Propithecus_perrieri.k141_1630595                      C 0 I 64
s Propithecus_tattersalli.k141_790011                        23254 1 -     67325 -G
i Propithecus_tattersalli.k141_790011                    C 0 I 64
s Propithecus_verreauxi.k141_1019028                         12970 1 -     13615 -g
i Propithecus_verreauxi.k141_1019028                     C 0 I 64
s Psammomys_obesus.NESX01036370.1                             5346 2 -     21651 ag
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            10718 1 -     21811 -a
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteropus_alecto.KB030862.1                              22973211 1 +  28871421 -a
i Pteropus_alecto.KB030862.1                             C 0 I 5
s Pteropus_vampyrus.KN534172.1                                1145 1 -      8028 -a
i Pteropus_vampyrus.KN534172.1                           C 0 I 7
s Puma_concolor.QAVW01001104.1                            20262626 1 -  38429054 -a
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                              9283 2 -     91421 GA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603418 2 +   7812017 GA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9255 2 -     72585 GA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4498 1 +     55207 -G
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr8                                 113027608 2 - 133307652 AG
i Rattus_norvegicus.chr8                                 C 0 C 0
s Rhinopithecus_bieti.k119_217274                              669 2 -     11128 GA
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230047 2 - 195417433 ga
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7665755 2 +   7961872 GA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84191 1 -     96226 -A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 5
s Saiga_tatarica.SaiTat_scaffold_373180                       3148 1 +      4321 -G
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    150893 1 -    313613 -G
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 6
s Semnopithecus_entellus.k141_11662                          13798 2 -     19888 GA
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21004 2 +     39453 GA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            1528 2 +     27826 GA
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1048 2 -     19483 GA
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1112 2 +      7198 GA
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9370 2 +     15514 GA
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                     9285 2 -     12148 AG
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187207 1 -    191337 -A
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13646578 1 -  18376816 -t
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             26729 1 +     97271 -A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Sus_scrofa.CM000828.4                                   62881699 1 -  69701581 -a
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1087352 2 -   1523678 GA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6340 1 +     41958 -T
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 68961 1 +    116680 -A
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      114695 1 -    156842 -A
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383158 1 +    539355 -A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1598868                                9075 2 -     11412 AA
i Tarsius_lariang.k141_1598868                           C 0 C 0
s Tarsius_wallacei.k141_780063                               13791 2 +     25099 AA
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422380 2 + 186847797 ga
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              102556 2 +    114563 AA
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   1011 1 +      8208 -A
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78485 1 +    610378 -A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          5106 2 -     20410 GA
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9300 2 +     15221 GA
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5206 2 +     19930 GA
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       1634 2 -     19997 GA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            41754 2 -     60166 GA
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9227 2 -     27529 GA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9163 2 -     18194 GA
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           2902 2 -     21137 GA
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    1602 2 -     10723 GA
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                          758 2 +      9834 GA
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19072 2 +     32220 GA
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933170 2 +   6242583 GA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2416 2 +     20839 GA
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_124071                    183 1 -      2171 -G
i Tragulus_javanicus.TraJav_scaffold_124071              C 0 C 0
s Trichechus_manatus.JH594705.1                            4291883 1 +  10818551 -a
i Trichechus_manatus.JH594705.1                          I 2 C 0
s Tupaia_chinensis.KB320699.1                              2149090 2 +   4065304 aa
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     2713 2 -     10553 AA
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737187 1 +  33153633 -a
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   51029 1 -     77625 -T
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4846429 1 -   5085361 -a
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   6966 1 +     50397 -a
i Varecia_rubra.k141_590885                              C 0 I 105
s Varecia_variegata.k141_1128296                              7016 1 +     24756 -a
i Varecia_variegata.k141_1128296                         C 0 I 103
s Vicugna_pacos.KN270157.1                                 5367885 1 -   5488506 -a
i Vicugna_pacos.KN270157.1                               I 2 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  6815 1 -     43706 -a
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19172 2 -     24430 ag
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9455 2 +     63895 ag
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            10879 1 +     12536 -A
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Zalophus_californianus.ZalCal_flattened_line_63728          1364 0 +      2932 C
e Suricata_suricatta.SurSur_flattened_line_6629               6689 1 -    196729 I
e Spermophilus_dauricus.KZ294078.1                         1947631 52 -   3870691 I
e Rhinolophus_sinicus.LVEH01000134.1                        366452 2 -   3329780 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         36202 0 +     42204 C
e Ondatra_zibethicus.OndZib_scaffold_46174                   16448 1 +     28053 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105733290 16 + 199412804 I
e Nycticebus_coucang.k141_7325916                             4038 16 -      4362 I
e Nycticebus_bengalensis.LG01                            102569259 16 - 196305487 I
e Mungos_mungo.MunMun_flattened_line_23663                   23843 1 +     37127 I
e Megaderma_lyra.MegLyr_scaffold_4542                         6350 2 -    207569 I
e Marmota_marmota.CZRN01000018.1                          33096854 52 -  40650429 I
e Ictidomys_tridecemlineatus.JH393364.1                    7514007 52 -   7955117 I
e Hipposideros_galeritus.HipGal_scaffold_29171               39343 2 +     43066 I
e Hipposideros_armiger.JXIK01000431.1                       107904 2 +   1711038 I
e Helogale_parvula.HelPar_flattened_line_2585               230670 1 +    327341 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  11496 2 +     14536 I
e Dipodomys_ordii.KN672350.1                              18895300 2 +  37912305 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834292 0 +   1526836 C
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          10033 2 -     20389 I
e Canis_lupus_familiaris.chr16                            17954931 69 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9030672 64 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    181284 65 -    185531 I
e CanFam4.chr16                                           17795221 72 -  60362399 I

a score=0.000000
s hg38.chrUn_KI270753v1                                        324  2 +     62944 A-----------A
s Acinonyx_jubatus.LLWD01001279.1                           816478  2 -   1699592 g-----------a
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 1
s Acomys_cahirinus.AcoCah_scaffold_12655                     66155  2 +     87051 A-----------A
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506431  2 -  29979442 a-----------a
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 1
s Ailurus_fulgens.LNAC01001112.1                             74718  2 -    347723 G-----------G
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 1
s Allactaga_bullata.AllBul_scaffold_9566                     64452  2 -     89534 G-----------A
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    8797  2 -     52922 A-----------A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          8722  2 -     28001 A-----------A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           8848  2 -      9772 A-----------A
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                              5  2 -     12518 A-----------A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          674752  2 -   2318259 a-----------a
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      182629  1 +    412891 A------------
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97203  2 -    100397 G-----------G
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       6711  2 +     20879 A-----------A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 16
s Arctocebus_calabarensis.k141_1894080                        5456  2 +      5713 a-----------a
i Arctocebus_calabarensis.k141_1894080                   I 1 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  1981  1 +     43469 A------------
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  48763  2 -     92717 a-----------a
i Avahi_laniger.k141_765380                              I 92 C 0
s Avahi_peyrierasi.k141_1424874                              49360  2 +     85213 a-----------a
i Avahi_peyrierasi.k141_1424874                          I 92 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191044  2 +  23207421 a-----------a
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         1510  2 -     18090 a-----------a
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    25674  2 +     34529 A-----------A
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    198424  2 -    288883 a-----------a
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20271623  2 +  48749331 A-----------A
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1124179  2 -   1948126 a-----------a
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18082261  2 +  45695690 a-----------a
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2817752  2 +   4408762 G-----------A
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998397  2 -  17673402 a-----------a
i Camelus_bactrianus.KN276810.1                          I 1 C 0
s Camelus_dromedarius.KN272107.1                           2330861  2 -   7040546 a-----------a
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399137  2 -   1652518 a-----------a
i Camelus_ferus.KB017975.1                               I 1 C 0
s Canis_lupus_orion.HG994398.1                            18496165  2 +  63665305 a-----------g
i Canis_lupus_orion.HG994398.1                           C 0 I 1
s Capra_aegagrus.CM003241.1                               18828869  2 +  46296322 a-----------a
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18059589  2 -  44709034 a-----------a
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                     490  2 -     12242 A-----------A
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           140190  2 -    496798 a-----------a
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2399  1 -     11696 A------------
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133171  2 +    179628 A-----------A
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     88201  1 +    217609 A------------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 9
s Cavia_aperea.AVPZ01000300.1                             18346992  2 -  23392119 a-----------a
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18359252  2 -  23407841 a-----------a
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98127  2 +    143979 A-----------A
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         4086  2 -      8605 a-----------a
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227371  2 +  27778364 a-----------a
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2089  2 -      3715 A-----------A
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4469766  2 +   4669795 a-----------a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8315  2 -     19203 A-----------A
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           2734  2 +      8260 A-----------A
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           2964  2 +     27781 A-----------A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3110  2 -     20310 A-----------A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6094  2 +     29689 A-----------A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             447  2 +      9989 A-----------A
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           8782  2 -     27936 A-----------A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             8801  2 -     11289 A-----------A
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811177  2 +  39242232 A-----------A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21216868  2 -  21565898 A-----------A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       33988  2 -     53127 A-----------A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1280  2 +      7159 A-----------A
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        8793  2 -     27947 A-----------A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          8769  2 +     17596 A-----------A
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39263  2 -     41420 A-----------A
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4012  2 -      6351 A-----------A
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_1490224                            61110  2 +     61209 a-----------a
i Cheirogaleus_major.k141_1490224                        I 102 C 0
s Cheirogaleus_medius.k141_1055463                           11486  2 +     57038 a-----------a
i Cheirogaleus_medius.k141_1055463                       I 98 C 0
s Chinchilla_lanigera.JH722012.1                           1248033  1 +   2543920 a------------
i Chinchilla_lanigera.JH722012.1                         C 0 I 23
s Chlorocebus_aethiops.ctg25                              18422732  2 -  18827391 A-----------A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9175  2 -     50209 A-----------A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416180  2 + 135778131 a-----------a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 14639  2 +     19366 A-----------A
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            169742  2 +    839153 A-----------A
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1904703  2 +   2368649 a-----------a
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944321  2 + 200372422 A-----------A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31215  2 +     84244 A-----------A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545474  2 -  53390261 a-----------a
i Condylura_cristata.JH655891.1                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 46403  2 +     63868 A-----------A
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11663393  2 + 224834208 a-----------a
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_603213               629  2 +      1923 A-----------A
i Crocidura_indochinensis.CroInd_scaffold_603213         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             17488  1 -     87169 A------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 1
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  34896  2 +     51376 A-----------A
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2369  3 +      5455 A----------AA
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793             759  2 +      3576 A-----------A
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            60189  2 +   2246927 a-----------a
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532384  2 -  12879189 A-----------A
i Daubentonia_madagascariensis.ctg71                     I 20 C 0
s Delphinapterus_leucas.KZ290073.1                        16810680  2 +  35494412 A-----------A
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8627430  1 +  20541912 a------------
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  668903  2 +   1390856 a-----------a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    1978  2 +    198055 A-----------A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    33821  2 +     67921 A-----------G
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31014  2 -     42551 A-----------A
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE759718.1                                   6943  1 +     11740 a------------
i Eidolon_helvum.KE759718.1                              I 4 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       309876  2 +    607251 A-----------A
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1088527  2 +  10337057 C-----------A
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          12203  2 -    110024 a-----------a
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01123422.1                            3153  2 +      5358 a-----------a
i Ellobius_talpinus.LOJH01123422.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16325298  2 -  41312741 a-----------a
i Enhydra_lutris.KZ291758.1                              I 1 I 1
s Eptesicus_fuscus.JH977646.1                              2143288  1 -  14770903 a------------
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279242  2 +   4378816 a-----------a
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527063  2 -  39960074 a-----------a
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29078  2 +    498745 a-----------a
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3320273  2 -   7059049 a-----------a
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21199415  2 -  21539334 A-----------A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10356  2 +    133382 A-----------A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24294  2 -     44125 A-----------A
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Eulemur_albifrons.k141_342033                               9432  2 -     14127 A-----------A
i Eulemur_albifrons.k141_342033                          I 59 C 0
s Eulemur_collaris.k141_377015                                2122  2 -     16928 A-----------A
i Eulemur_collaris.k141_377015                           I 59 C 0
s Eulemur_coronatus.k141_885031                              11153  2 -     25546 A-----------A
i Eulemur_coronatus.k141_885031                          I 59 C 0
s Eulemur_flavifrons.k141_1184614                             8340  2 +     26330 a-----------a
i Eulemur_flavifrons.k141_1184614                        I 59 C 0
s Eulemur_fulvus.k141_544389                                  9597  2 +     23973 A-----------A
i Eulemur_fulvus.k141_544389                             I 59 C 0
s Eulemur_macaco.k141_1562045                                 8344  2 +     75513 a-----------a
i Eulemur_macaco.k141_1562045                            I 59 C 0
s Eulemur_mongoz.k141_232305                                  6292  2 +     97555 a-----------a
i Eulemur_mongoz.k141_232305                             I 59 C 0
s Eulemur_rubriventer.k141_571033                             9226  2 +     26496 G-----------A
i Eulemur_rubriventer.k141_571033                        I 59 C 0
s Eulemur_rufus.k141_2367191                                  2231  2 +      2552 a-----------a
i Eulemur_rufus.k141_2367191                             I 59 C 0
s Eulemur_sanfordi.k141_1122526                               9399  2 +    111500 a-----------a
i Eulemur_sanfordi.k141_1122526                          I 59 C 0
s Felis_catus.KN305074.1                                       141  2 -      2052 g-----------a
i Felis_catus.KN305074.1                                 C 0 I 1
s Felis_catus_fca126.CM031415.1                           20184907  2 + 205367284 g-----------a
i Felis_catus_fca126.CM031415.1                          C 0 I 1
s Felis_nigripes.FelNig_flattened_line_125938                10021  2 -     11347 G-----------A
i Felis_nigripes.FelNig_flattened_line_125938            C 0 I 1
s Fukomys_damarensis.KN121974.1                             848039  2 +   3816255 a-----------a
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galagoides_demidoff.k141_31856                              2156  2 -      3432 a-----------a
i Galagoides_demidoff.k141_31856                         I 1 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               24951  2 +     26054 A-----------A
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     608380  2 -    660261 A-----------A
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            29790  2 +     49224 a-----------a
i Glis_glis.GliGli_scaffold_19807                        C 0 I 20
s Gorilla_beringei.k141_3596273                               9762  2 -     32273 A-----------A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186331915  2 + 186649187 a-----------a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   29597  2 +     78134 A-----------A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 5
s Hapalemur_alaotrensis.k141_170648                           2484  2 -     19426 a-----------a
i Hapalemur_alaotrensis.k141_170648                      I 63 C 0
s Hapalemur_gilberti.k141_488810                              7630  2 -     15286 a-----------a
i Hapalemur_gilberti.k141_488810                         I 63 C 0
s Hapalemur_griseus.k141_1511508                              9249  2 +     18253 a-----------a
i Hapalemur_griseus.k141_1511508                         I 63 C 0
s Hapalemur_meridionalis.k141_248335                          9371  2 -     41752 a-----------a
i Hapalemur_meridionalis.k141_248335                     I 63 C 0
s Hapalemur_occidentalis.k141_907772                          9193  2 -     16460 a-----------a
i Hapalemur_occidentalis.k141_907772                     I 63 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17074  2 +     36099 A-----------A
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20658929  2 +  22651954 a-----------a
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_173205                2866  2 -      3357 A-----------A
i Heterohyrax_brucei.HetBruBak_scaffold_173205           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111537  2 +    128679 A-----------A
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hoolock_leuconedys.ctg274                                    428749  2 +    630532 A-----------A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  32771  1 +     55795 A------------
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 1
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19372  2 -    143317 A-----------A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_307679                               11667  2 -     15490 A-----------A
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              53672  2 +     67168 A-----------A
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189537116  2 - 191637585 A-----------A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3330215  2 -  11177569 A-----------A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80448  2 +    135385 A-----------A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Indri_indri.k141_3655594                                   17620  2 +     31101 a-----------a
i Indri_indri.k141_3655594                               I 84 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               21897  2 +     23964 A-----------A
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8270825  2 -   9596543 a-----------a
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1164  2 -      3359 A-----------A
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    11419  1 -     42476 A------------
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15519730  2 -  30322482 A-----------A
i Lemur_catta.scaffold_24                                I 63 C 0
s Lepilemur_ankaranensis.k141_596936                          6243  2 -     23766 a-----------a
i Lepilemur_ankaranensis.k141_596936                     I 66 C 0
s Lepilemur_dorsalis.k141_577674                             24190  2 +     45836 a-----------a
i Lepilemur_dorsalis.k141_577674                         I 50 C 0
s Lepilemur_ruficaudatus.k141_420445                         31100  2 -     32627 a-----------a
i Lepilemur_ruficaudatus.k141_420445                     I 70 C 0
s Leptonychotes_weddellii.APMU01165359.1                      1471  2 -      1663 a-----------a
i Leptonychotes_weddellii.APMU01165359.1                 C 0 I 1
s Lepus_americanus.LepAme_scaffold_107385                     3105  2 -     14121 A-----------A
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             266978  2 -    662738 a-----------a
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1430932  2 +   1826925 A-----------A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             160  2 +     11245 a-----------a
i Loris_lydekkerianus.k141_2539221                       N 0 C 0
s Loris_tardigradus.ctg83                                   998995  2 +   6120653 a-----------a
i Loris_tardigradus.ctg83                                N 0 C 0
s Loxodonta_africana.GL010049.1                            4213981  2 -  43346337 a-----------a
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951176  2 -  59628241 g-----------g
i Lycaon_pictus.CM007581.1                               C 0 I 1
s Macaca_arctoides.k141_2326796                               1121  2 +     40492 A-----------A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670381  2 +  60120075 A-----------A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  6879  2 -     26193 A-----------A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            74670  2 -    114318 A-----------A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   392  2 -     23192 A-----------A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                 9841  2 -     29190 A-----------A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18412  2 +     37952 A-----------A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833500  2 + 187317192 a-----------a
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452058  2 -  25927173 a-----------a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74261  2 +     89720 A-----------A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1258  2 +     20474 A-----------A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1059  2 -     14993 A-----------A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  323691  2 -    668171 A-----------A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15201  2 -     15935 A-----------A
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               19997  2 -     45290 A-----------A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87083  1 +     94391 A------------
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 4 C 0
s Mandrillus_leucophaeus.scaffold280                      23931551  2 -  24302211 A-----------A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               345731  2 +    752769 A-----------A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15051  2 +    737560 A-----------A
i Manis_javanica.JSZB01003497.1                          C 0 I 34
s Manis_pentadactyla.KN006162.1                              46445  2 -    317179 A-----------A
i Manis_pentadactyla.KN006162.1                          C 0 I 30
s Mellivora_capensis.MelCap_flattened_line_69365              5537  2 +     13704 A-----------T
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 1
s Meriones_unguiculatus.MerUng_scaffold_7390                 27706  2 +    140813 A-----------A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12177735  2 -  29670104 a-----------a
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    2565  2 +     10310 A-----------A
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18282496  2 -  93316391 a-----------g
i Microcebus_murinus.CM007674.1                          I 100 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    14972  2 -    145209 A-----------G
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                12946  1 -     19307 A------------
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11256134  2 -  27267610 a-----------a
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1848373  1 +   8254450 a------------
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32242  1 +     64694 A------------
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3288  2 -     28506 A-----------A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        61718  2 -     63350 A-----------A
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 I 1
s Mirza_zaza.k141_1511790                                    38493  2 +     38511 T-----------C
i Mirza_zaza.k141_1511790                                I 93 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26070  2 -    437263 A-----------A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137337  1 -    366855 A------------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_61429                  27014  2 -     27816 A-----------A
i Moschus_moschiferus.MosMos_scaffold_61429              C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           4437  1 +     14753 A------------
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              1804  2 +     14296 G-----------A
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 17
s Mustela_putorius.JH418006.1                               297182  2 -  14710649 a-----------a
i Mustela_putorius.JH418006.1                            C 0 I 1
s Myocastor_coypus.MyoCoy_scaffold_10123                     70633  2 -     80779 A-----------A
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                277544  1 -  10118263 a------------
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585116  1 -   6019432 a------------
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3901333  1 -   4330536 a------------
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        31883  1 +     33610 A------------
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              185603  2 +    196477 A-----------A
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2024986  2 -   3037898 a-----------a
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                                9301  2 +     21681 A-----------A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20298709  2 +  31847680 a-----------a
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 1
s Neophocaena_asiaeorientalis.KZ687982.1                   5865026  2 +   7148211 A-----------A
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    755910  1 +    783361 A------------
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145381  2 -   9404916 a-----------g
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 4
s Nycticebus_bengalensis.LG01                            102569275  2 - 196305487 a-----------a
i Nycticebus_bengalensis.LG01                            I 16 C 0
s Nycticebus_coucang.k141_7325916                             4054  2 -      4362 a-----------a
i Nycticebus_coucang.k141_7325916                        I 16 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105733306  2 + 199412804 a-----------a
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 16 C 0
s Ochotona_princeps.JH802162.1                             1355217  2 +   3988456 a-----------a
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  745918  2 +  11899542 a-----------a
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                              500234  2 -   2017862 a-----------a
i Odobenus_rosmarus.KB229312.1                           C 0 I 1
s Odocoileus_virginianus.KZ100018.1                         144251  2 +    630418 A-----------A
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          76296  2 -    150152 A-----------A
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   16449  2 +     28053 A-----------A
i Ondatra_zibethicus.OndZib_scaffold_46174               I 1 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    74549  2 +    102263 A-----------A
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2780941  2 -  10937097 a-----------a
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6338  2 -     18566 A-----------A
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67143959  2 + 174332312 a-----------a
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458141  2 -    559221 a-----------a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 1
s Ovis_aries.CM001607.2                                   17584605  2 +  44047080 A-----------A
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173026  2 -    191736 A-----------A
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    35686  2 +     80009 a-----------a
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189136636  2 + 189151597 a-----------a
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  140122  2 +    230217 A-----------G
i Panthera_onca.PanOnc_flattened_line_3271               I 2 I 1
s Panthera_pardus.KV860321.1                                251651  2 +  18783137 a-----------g
i Panthera_pardus.KV860321.1                             I 2 I 1
s Panthera_tigris.KE722367.1                               4710092  2 -   8748460 a-----------g
i Panthera_tigris.KE722367.1                             I 2 I 1
s Pantholops_hodgsonii.KE114653.1                          1263959  2 -   2937107 a-----------a
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183436873  2 + 183742232 a-----------a
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                              935  2 +     20448 A-----------A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20557557  2 +  20919399 A-----------A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_4051466                                   1135  2 -      1598 A-----------A
i Papio_kindae.k141_4051466                              C 0 C 0
s Papio_papio.k141_802527                                     2967  2 +     27711 A-----------A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  2956  2 +      9205 A-----------A
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272       913  1 -     78924 A------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 1
s Perodicticus_ibeanus.k141_855320                             262  2 +     13100 g-----------a
i Perodicticus_ibeanus.k141_855320                       I 1 C 0
s Perodicticus_potto.k141_1092827                              311  2 -      1096 g-----------a
i Perodicticus_potto.k141_1092827                        I 1 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       24857  2 +     32600 g-----------a
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18187345  2 -  18517816 a-----------a
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25403  2 -     29689 A-----------A
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               7988  2 +     63832 A-----------A
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           37819  2 +     62158 A-----------A
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        32548  2 +     89929 A-----------A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            33964  2 +     51399 A-----------A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290183  2 -  14605196 a-----------a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_7723             78902  1 +     79650 A------------
i Pipistrellus_pipistrellus.PipPip_scaffold_7723         C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           33700  2 +     35617 A-----------A
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189124725  2 + 189387572 a-----------a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9564568  2 +   9816681 A-----------A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               67457  2 -     81375 A-----------A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9281  2 +     10147 A-----------A
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9474  2 -     22811 A-----------A
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2592379  2 -   4620579 a-----------a
i Prolemur_simus.MPIZ01000396.1                          I 63 C 0
s Propithecus_coquerelli.NW_012148875.1                     985493  2 +   2598838 a-----------a
i Propithecus_coquerelli.NW_012148875.1                  I 64 C 0
s Propithecus_coronatus.k141_347390                          23785  2 +     38485 a-----------a
i Propithecus_coronatus.k141_347390                      I 64 C 0
s Propithecus_diadema.k141_1034595                           11872  2 -     12046 a-----------a
i Propithecus_diadema.k141_1034595                       I 64 C 0
s Propithecus_edwardsi.k141_1176054                          21313  2 +     35766 A-----------A
i Propithecus_edwardsi.k141_1176054                      I 64 C 0
s Propithecus_perrieri.k141_1630595                          16560  2 +     17239 a-----------a
i Propithecus_perrieri.k141_1630595                      I 64 C 0
s Propithecus_tattersalli.k141_790011                        23319  2 -     67325 A-----------A
i Propithecus_tattersalli.k141_790011                    I 64 C 0
s Propithecus_verreauxi.k141_1019028                         13035  2 -     13615 a-----------a
i Propithecus_verreauxi.k141_1019028                     I 64 C 0
s Psammomys_obesus.NESX01036370.1                             5348  2 -     21651 a-----------a
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            10719  1 -     21811 a------------
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36202  2 +     42204 A-----------A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 1
s Pteropus_alecto.KB030862.1                              22973217  1 +  28871421 a------------
i Pteropus_alecto.KB030862.1                             I 5 C 0
s Pteropus_vampyrus.KN534172.1                                1153  1 -      8028 a------------
i Pteropus_vampyrus.KN534172.1                           I 7 C 0
s Puma_concolor.QAVW01001104.1                            20262627  2 -  38429054 g-----------a
i Puma_concolor.QAVW01001104.1                           C 0 I 1
s Pygathrix_cinerea.k141_1153803                              9285  2 -     91421 A-----------A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603420  2 +   7812017 A-----------A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9257  2 -     72585 A-----------A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4499  2 +     55207 A-----------A
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr8                                 113027610  2 - 133307652 G-----------T
i Rattus_norvegicus.chr8                                 C 0 C 0
s Rhinopithecus_bieti.k119_217274                              671  2 -     11128 A-----------A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230049  2 - 195417433 a-----------a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7665757  2 +   7961872 A-----------A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84197  1 -     96226 A------------
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 5 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3149  2 +      4321 A-----------A
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    150900  2 -    313613 G-----------T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 6 C 0
s Semnopithecus_entellus.k141_11662                          13800  2 -     19888 A-----------A
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21006  2 +     39453 A-----------A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            1530  2 +     27826 A-----------A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1050  2 -     19483 A-----------A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1114  2 +      7198 A-----------A
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9372  2 +     15514 A-----------A
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                     9287  1 -     12148 A------------
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 I 65
s Solenodon_paradoxus.SolPar_flattened_line_5840            187208  2 -    191337 A-----------A
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13646579  2 -  18376816 a-----------a
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             26730  2 +     97271 A-----------A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 1
s Sus_scrofa.CM000828.4                                   62881700 13 -  69701581 aataaataaataa
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1087354  2 -   1523678 A-----------A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6341  1 +     41958 A------------
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 68962  2 +    116680 A-----------A
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      114696  2 -    156842 A-----------A
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383159  2 +    539355 A-----------A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1598868                                9077  2 -     11412 A-----------A
i Tarsius_lariang.k141_1598868                           C 0 C 0
s Tarsius_wallacei.k141_780063                               13793  2 +     25099 a-----------a
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422382  2 + 186847797 a-----------a
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              102558  2 +    114563 G-----------A
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   1012  2 +      8208 A-----------A
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78486  1 +    610378 A------------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          5108  2 -     20410 A-----------A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9302  2 +     15221 A-----------A
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5208  2 +     19930 A-----------A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       1636  2 -     19997 A-----------A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            41756  2 -     60166 A-----------A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9229  2 -     27529 A-----------A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9165  2 -     18194 A-----------A
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           2904  2 -     21137 A-----------A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    1604  2 -     10723 A-----------A
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                          760  2 +      9834 A-----------A
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19074  2 +     32220 A-----------A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933172  2 +   6242583 A-----------A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2418  2 +     20839 A-----------A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_124071                    184  2 -      2171 A-----------A
i Tragulus_javanicus.TraJav_scaffold_124071              C 0 C 0
s Trichechus_manatus.JH594705.1                            4291884  2 +  10818551 a-----------a
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2149092  2 +   4065304 a-----------a
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     2715  2 -     10553 A-----------A
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737188  2 +  33153633 a-----------a
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   51030  2 -     77625 T-----------T
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4846430  2 -   5085361 a-----------a
i Ursus_maritimus.KK499267.1                             C 0 I 1
s Varecia_rubra.k141_590885                                   7072  2 +     50397 a-----------a
i Varecia_rubra.k141_590885                              I 105 C 0
s Varecia_variegata.k141_1128296                              7120  2 +     24756 g-----------a
i Varecia_variegata.k141_1128296                         I 103 C 0
s Vicugna_pacos.KN270157.1                                 5367886  2 -   5488506 a-----------a
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  6816  2 -     43706 a-----------g
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 1
s Xerus_inauris.XerIna_scaffold_48378                        19174  2 -     24430 a-----------a
i Xerus_inauris.XerIna_scaffold_48378                    C 0 I 16
s Zalophus_californianus.ZalCal_flattened_line_63728          1364  2 +      2932 A-----------A
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 I 1
s Zapus_hudsonius.ZapHud_scaffold_11398                       9457  2 +     63895 a-----------a
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            10880  2 +     12536 A-----------A
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Suricata_suricatta.SurSur_flattened_line_6629               6689  1 -    196729 I
e Spermophilus_dauricus.KZ294078.1                         1947631 52 -   3870691 I
e Rhinolophus_sinicus.LVEH01000134.1                        366452  2 -   3329780 I
e Mungos_mungo.MunMun_flattened_line_23663                   23843  1 +     37127 I
e Megaderma_lyra.MegLyr_scaffold_4542                         6350  2 -    207569 I
e Marmota_marmota.CZRN01000018.1                          33096854 52 -  40650429 I
e Lepilemur_septentrionalis.k141_185316                      22230 48 +     54090 I
e Ictidomys_tridecemlineatus.JH393364.1                    7514007 52 -   7955117 I
e Hipposideros_galeritus.HipGal_scaffold_29171               39343  2 +     43066 I
e Hipposideros_armiger.JXIK01000431.1                       107904  2 +   1711038 I
e Helogale_parvula.HelPar_flattened_line_2585               230670  1 +    327341 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  11496  2 +     14536 I
e Dipodomys_ordii.KN672350.1                              18895300  2 +  37912305 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834292  0 +   1526836 C
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          10033  2 -     20389 I
e Canis_lupus_familiaris.chr16                            17954931 69 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9030672 64 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    181284 65 -    185531 I
e CanFam4.chr16                                           17795221 72 -  60362399 I

a score=0.000000
s hg38.chrUn_KI270753v1                                        326 1 +     62944 A
s Acomys_cahirinus.AcoCah_scaffold_12655                     66157 1 +     87051 C
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 79
s Allactaga_bullata.AllBul_scaffold_9566                     64454 1 -     89534 A
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    8799 1 -     52922 A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          8724 1 -     28001 A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           8850 1 -      9772 A
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                              7 1 -     12518 A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          674754 1 -   2318259 a
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      182630 1 +    412891 A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97205 1 -    100397 A
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       6729 1 +     20879 A
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 16 C 0
s Arctocebus_calabarensis.k141_1894080                        5458 1 +      5713 a
i Arctocebus_calabarensis.k141_1894080                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  1982 1 +     43469 A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  48765 1 -     92717 g
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              49362 1 +     85213 g
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191046 1 +  23207421 a
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         1512 1 -     18090 a
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    25676 1 +     34529 A
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    198426 1 -    288883 a
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20271625 1 +  48749331 A
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1124181 1 -   1948126 a
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18082263 1 +  45695690 a
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2817754 1 +   4408762 A
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998399 1 -  17673402 a
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2330863 1 -   7040546 a
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399139 1 -   1652518 a
i Camelus_ferus.KB017975.1                               C 0 C 0
s Capra_aegagrus.CM003241.1                               18828871 1 +  46296322 a
i Capra_aegagrus.CM003241.1                              C 0 I 1
s Capra_hircus.CM004588.1                                 18059591 1 -  44709034 a
i Capra_hircus.CM004588.1                                C 0 I 1
s Capromys_pilorides.CapPil_scaffold_65020                     492 1 -     12242 A
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           140192 1 -    496798 g
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2400 1 -     11696 A
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133173 1 +    179628 A
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18346994 1 -  23392119 a
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18359254 1 -  23407841 a
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98129 1 +    143979 A
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         4088 1 -      8605 g
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227373 1 +  27778364 a
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2091 1 -      3715 A
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4469768 1 +   4669795 a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8317 1 -     19203 A
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           2736 1 +      8260 A
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           2966 1 +     27781 A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3112 1 -     20310 A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6096 1 +     29689 A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             449 1 +      9989 A
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           8784 1 -     27936 A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             8803 1 -     11289 A
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811179 1 +  39242232 A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21216870 1 -  21565898 A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       33990 1 -     53127 A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1282 1 +      7159 A
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        8795 1 -     27947 A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          8771 1 +     17596 A
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39265 1 -     41420 A
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4014 1 -      6351 A
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_1490224                            61112 1 +     61209 g
i Cheirogaleus_major.k141_1490224                        C 0 C 0
s Cheirogaleus_medius.k141_1055463                           11488 1 +     57038 a
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chlorocebus_aethiops.ctg25                              18422734 1 -  18827391 A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9177 1 -     50209 A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416182 1 + 135778131 a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1904705 1 +   2368649 a
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944323 1 + 200372422 A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31217 1 +     84244 A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545476 1 -  53390261 a
i Condylura_cristata.JH655891.1                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 46405 1 +     63868 A
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 70
s Cricetulus_griseus.LT883664.1                           11663395 1 + 224834208 a
i Cricetulus_griseus.LT883664.1                          C 0 I 74
s Crocidura_indochinensis.CroInd_scaffold_603213               631 1 +      1923 A
i Crocidura_indochinensis.CroInd_scaffold_603213         C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  34898 1 +     51376 A
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2372 1 +      5455 A
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793             761 1 +      3576 A
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            60191 1 +   2246927 a
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532386 1 -  12879189 A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16810682 1 +  35494412 A
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8627431 1 +  20541912 a
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  668905 1 +   1390856 a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    1980 1 +    198055 A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    33823 1 +     67921 A
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31016 1 -     42551 A
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE759718.1                                   6944 1 +     11740 a
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       309878 1 +    607251 A
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1088529 1 +  10337057 A
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          12205 1 -    110024 a
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 75
s Ellobius_talpinus.LOJH01123422.1                            3155 1 +      5358 a
i Ellobius_talpinus.LOJH01123422.1                       C 0 I 75
s Eptesicus_fuscus.JH977646.1                              2143289 1 -  14770903 a
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279244 1 +   4378816 a
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527065 1 -  39960074 a
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29080 1 +    498745 a
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3320275 1 -   7059049 a
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21199417 1 -  21539334 A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10358 1 +    133382 A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24296 1 -     44125 A
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Eulemur_albifrons.k141_342033                               9434 1 -     14127 G
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                2124 1 -     16928 G
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              11155 1 -     25546 G
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             8342 1 +     26330 g
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                  9599 1 +     23973 G
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 8346 1 +     75513 g
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  6294 1 +     97555 g
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                             9228 1 +     26496 G
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_2367191                                  2233 1 +      2552 g
i Eulemur_rufus.k141_2367191                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                               9401 1 +    111500 g
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Fukomys_damarensis.KN121974.1                             848041 1 +   3816255 a
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galagoides_demidoff.k141_31856                              2158 1 -      3432 a
i Galagoides_demidoff.k141_31856                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               24953 1 +     26054 A
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     608382 1 -    660261 C
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            29812 1 +     49224 a
i Glis_glis.GliGli_scaffold_19807                        I 20 C 0
s Gorilla_beringei.k141_3596273                               9764 1 -     32273 A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186331917 1 + 186649187 a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           2486 1 -     19426 g
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              7632 1 -     15286 g
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                              9251 1 +     18253 g
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                          9373 1 -     41752 g
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                          9195 1 -     16460 g
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17076 1 +     36099 G
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20658931 1 +  22651954 g
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_173205                2868 1 -      3357 A
i Heterohyrax_brucei.HetBruBak_scaffold_173205           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111539 1 +    128679 A
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hoolock_leuconedys.ctg274                                    428751 1 +    630532 A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19374 1 -    143317 A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_307679                               11669 1 -     15490 A
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              53674 1 +     67168 A
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189537118 1 - 191637585 A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3330217 1 -  11177569 A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80450 1 +    135385 A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Indri_indri.k141_3655594                                   17622 1 +     31101 g
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               21899 1 +     23964 A
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8270827 1 -   9596543 a
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1166 1 -      3359 A
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    11420 1 -     42476 A
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15519732 1 -  30322482 G
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6245 1 -     23766 g
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24192 1 +     45836 g
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31102 1 -     32627 g
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     3107 1 -     14121 A
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             266980 1 -    662738 a
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1430934 1 +   1826925 A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             162 1 +     11245 a
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   998997 1 +   6120653 a
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4213983 1 -  43346337 a
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Macaca_arctoides.k141_2326796                               1123 1 +     40492 A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670383 1 +  60120075 A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  6881 1 -     26193 A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            74672 1 -    114318 A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   394 1 -     23192 A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                 9843 1 -     29190 A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18414 1 +     37952 A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833502 1 + 187317192 a
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452060 1 -  25927173 a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74263 1 +     89720 A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1260 1 +     20474 A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1061 1 -     14993 A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  323693 1 -    668171 A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15203 1 -     15935 A
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               19999 1 -     45290 A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87084 1 +     94391 A
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23931553 1 -  24302211 A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               345733 1 +    752769 A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15087 1 +    737560 a
i Manis_javanica.JSZB01003497.1                          I 34 I 21
s Manis_pentadactyla.KN006162.1                              46477 1 -    317179 a
i Manis_pentadactyla.KN006162.1                          I 30 I 21
s Meriones_unguiculatus.MerUng_scaffold_7390                 27708 1 +    140813 A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 76
s Mesocricetus_auratus.KB708134.1                         12177737 1 -  29670104 a
i Mesocricetus_auratus.KB708134.1                        C 0 I 75
s Mesoplodon_bidens.MesBid_scaffold_108144                    2567 1 +     10310 A
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18282498 1 -  93316391 g
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    14974 1 -    145209 A
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                12947 1 -     19307 A
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11256136 1 -  27267610 a
i Microtus_ochrogaster.CM001695.1                        C 0 I 59
s Miniopterus_natalensis.LDJU01000034.1                    1848374 1 +   8254450 a
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32243 1 +     64694 A
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3290 1 -     28506 A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirza_zaza.k141_1511790                                    38495 1 +     38511 C
i Mirza_zaza.k141_1511790                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26072 1 -    437263 A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137338 1 -    366855 A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_61429                  27016 1 -     27816 A
i Moschus_moschiferus.MosMos_scaffold_61429              C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           4438 1 +     14753 A
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              1823 1 +     14296 A
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 17 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     70635 1 -     80779 A
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                277545 1 -  10118263 a
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585117 1 -   6019432 a
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3901334 1 -   4330536 a
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              185605 1 +    196477 G
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2024988 1 -   3037898 a
i Nannospalax_galili.KL204047.1                          C 0 I 53
s Nasalis_larvatus.k141_413338                                9303 1 +     21681 A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865028 1 +   7148211 A
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    755911 1 +    783361 A
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nycticebus_bengalensis.LG01                            102569277 1 - 196305487 a
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_7325916                             4056 1 -      4362 a
i Nycticebus_coucang.k141_7325916                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105733308 1 + 199412804 a
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355219 1 +   3988456 a
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  745920 1 +  11899542 a
i Octodon_degus.JH651603.1                               C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         144253 1 +    630418 A
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          76298 1 -    150152 C
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   16451 1 +     28053 A
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 75
s Onychomys_torridus.OnyTor_scaffold_2986                    74551 1 +    102263 A
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 75
s Orcinus_orca.KB316932.1                                  2780943 1 -  10937097 a
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6340 1 -     18566 A
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67143961 1 + 174332312 a
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Ovis_aries.CM001607.2                                   17584607 1 +  44047080 G
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173028 1 -    191736 G
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    35688 1 +     80009 a
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189136638 1 + 189151597 a
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1263961 1 -   2937107 a
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183436875 1 + 183742232 a
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                              937 1 +     20448 A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20557559 1 +  20919399 A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_4051466                                   1137 1 -      1598 A
i Papio_kindae.k141_4051466                              C 0 C 0
s Papio_papio.k141_802527                                     2969 1 +     27711 A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  2958 1 +      9205 A
i Papio_ursinus.k141_3428135                             C 0 C 0
s Perodicticus_ibeanus.k141_855320                             264 1 +     13100 a
i Perodicticus_ibeanus.k141_855320                       C 0 I 3882
s Perodicticus_potto.k141_1092827                              313 1 -      1096 a
i Perodicticus_potto.k141_1092827                        C 0 N 0
s Perognathus_longimembris.PerPac_flattened_line_34437       24859 1 +     32600 a
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18187347 1 -  18517816 a
i Peromyscus_maniculatus.KI615324.1                      C 0 I 73
s Petromus_typicus.PetTyp_scaffold_42190                     25405 1 -     29689 A
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               7990 1 +     63832 A
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           37821 1 +     62158 A
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        32550 1 +     89929 A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            33966 1 +     51399 A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290185 1 -  14605196 a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_7723             78903 1 +     79650 A
i Pipistrellus_pipistrellus.PipPip_scaffold_7723         C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           33702 1 +     35617 A
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189124727 1 + 189387572 a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9564570 1 +   9816681 A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               67459 1 -     81375 A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9283 1 +     10147 A
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9476 1 -     22811 A
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2592381 1 -   4620579 g
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     985495 1 +   2598838 g
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          23787 1 +     38485 g
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_1034595                           11874 1 -     12046 g
i Propithecus_diadema.k141_1034595                       C 0 C 0
s Propithecus_edwardsi.k141_1176054                          21315 1 +     35766 G
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1630595                          16562 1 +     17239 g
i Propithecus_perrieri.k141_1630595                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        23321 1 -     67325 G
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_1019028                         13037 1 -     13615 g
i Propithecus_verreauxi.k141_1019028                     C 0 C 0
s Psammomys_obesus.NESX01036370.1                             5350 1 -     21651 a
i Psammomys_obesus.NESX01036370.1                        C 0 I 75
s Pteronotus_parnellii.KE909381.1                            10720 1 -     21811 a
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteropus_alecto.KB030862.1                              22973218 1 +  28871421 a
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1154 1 -      8028 a
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                              9287 1 -     91421 A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603422 1 +   7812017 A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9259 1 -     72585 A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4501 1 +     55207 A
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr8                                 113027612 1 - 133307652 A
i Rattus_norvegicus.chr8                                 C 0 I 89
s Rhinopithecus_bieti.k119_217274                              673 1 -     11128 A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230051 1 - 195417433 a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7665759 1 +   7961872 A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84198 1 -     96226 A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3151 1 +      4321 A
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    150902 1 -    313613 G
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          13802 1 -     19888 A
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21008 1 +     39453 A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            1532 1 +     27826 A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1052 1 -     19483 A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1116 1 +      7198 A
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9374 1 +     15514 A
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187210 1 -    191337 A
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13646581 1 -  18376816 a
i Sorex_araneus.JH798187.1                               C 0 C 0
s Sus_scrofa.CM000828.4                                   62881713 1 -  69701581 a
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1087356 1 -   1523678 A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6342 1 +     41958 A
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 68964 1 +    116680 G
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      114698 1 -    156842 A
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383161 1 +    539355 A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1598868                                9079 1 -     11412 G
i Tarsius_lariang.k141_1598868                           C 0 C 0
s Tarsius_wallacei.k141_780063                               13795 1 +     25099 g
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422384 1 + 186847797 a
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              102560 1 +    114563 A
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   1014 1 +      8208 A
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78487 1 +    610378 A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          5110 1 -     20410 A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9304 1 +     15221 A
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5210 1 +     19930 A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       1638 1 -     19997 A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            41758 1 -     60166 A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9231 1 -     27529 A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9167 1 -     18194 A
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           2906 1 -     21137 A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    1606 1 -     10723 A
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                          762 1 +      9834 A
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19076 1 +     32220 A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933174 1 +   6242583 A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2420 1 +     20839 A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_124071                    186 1 -      2171 A
i Tragulus_javanicus.TraJav_scaffold_124071              C 0 C 0
s Trichechus_manatus.JH594705.1                            4291886 1 +  10818551 a
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2149094 1 +   4065304 a
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     2717 1 -     10553 A
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737190 1 +  33153633 a
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   51032 1 -     77625 A
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Varecia_rubra.k141_590885                                   7074 1 +     50397 g
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              7122 1 +     24756 g
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5367888 1 -   5488506 a
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19192 1 -     24430 a
i Xerus_inauris.XerIna_scaffold_48378                    I 16 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9459 1 +     63895 a
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            10882 1 +     12536 A
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Zalophus_californianus.ZalCal_flattened_line_63728          1366 1 +      2932 I
e Vulpes_lagopus.VulLag_flattened_line_30954                  6818 1 -     43706 I
e Ursus_maritimus.KK499267.1                               4846432 1 -   5085361 I
e Suricata_suricatta.SurSur_flattened_line_6629               6689 1 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             26732 1 +     97271 I
e Spermophilus_dauricus.KZ294078.1                         1947631 52 -   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9288 65 -     12148 I
e Rhinolophus_sinicus.LVEH01000134.1                        366452 2 -   3329780 I
e Puma_concolor.QAVW01001104.1                            20262629 1 -  38429054 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         36204 1 +     42204 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272       914 1 -     78924 I
e Panthera_tigris.KE722367.1                               4710094 1 -   8748460 I
e Panthera_pardus.KV860321.1                                251653 1 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  140124 1 +    230217 I
e Otocyon_megalotis.JAEUCK010005147.1                       458143 1 -    559221 I
e Odobenus_rosmarus.KB229312.1                              500236 1 -   2017862 I
e Nyctereutes_procyonoides.CAJHUB010000658.1               9145383 4 -   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                20298711 1 +  31847680 I
e Myotis_myotis.MyoMyo_scaffold_28916                        31884 0 +     33610 C
e Mustela_putorius.JH418006.1                               297184 1 -  14710649 I
e Mungos_mungo.MunMun_flattened_line_23663                   23843 1 +     37127 I
e Mirounga_angustirostris.MirAng_flattened_line_22144        61720 1 -     63350 I
e Mellivora_capensis.MelCap_flattened_line_69365              5539 1 +     13704 I
e Megaderma_lyra.MegLyr_scaffold_4542                         6350 2 -    207569 I
e Marmota_marmota.CZRN01000018.1                          33096854 52 -  40650429 I
e Lycaon_pictus.CM007581.1                                17951178 1 -  59628241 I
e Leptonychotes_weddellii.APMU01165359.1                      1473 1 -      1663 I
e Lepilemur_septentrionalis.k141_185316                      22230 48 +     54090 I
e Ictidomys_tridecemlineatus.JH393364.1                    7514007 52 -   7955117 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  32772 1 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_29171               39343 2 +     43066 I
e Hipposideros_armiger.JXIK01000431.1                       107904 2 +   1711038 I
e Helogale_parvula.HelPar_flattened_line_2585               230670 1 +    327341 I
e Graphiurus_murinus.GraMur_scaffold_10447                   29599 5 +     78134 I
e Felis_nigripes.FelNig_flattened_line_125938                10023 1 -     11347 I
e Felis_catus_fca126.CM031415.1                           20184909 1 + 205367284 I
e Enhydra_lutris.KZ291758.1                               16325300 1 -  41312741 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  11496 2 +     14536 I
e Dipodomys_ordii.KN672350.1                              18895300 2 +  37912305 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834292 0 +   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129             17489 1 -     87169 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          10033 2 -     20389 I
e Choloepus_hoffmanni.KN194906.1                            169744 0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 14641 0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1248034 23 +   2543920 I
e Catagonus_wagneri.CatWag_scaffold_2839                     88202 9 +    217609 I
e Canis_lupus_orion.HG994398.1                            18496167 1 +  63665305 I
e Canis_lupus_familiaris.chr16                            17954931 69 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9030672 64 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    181284 65 -    185531 I
e CanFam4.chr16                                           17795221 72 -  60362399 I
e Ailurus_fulgens.LNAC01001112.1                             74720 1 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9506433 1 -  29979442 I
e Acinonyx_jubatus.LLWD01001279.1                           816480 1 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                        327  4 +     62944 A----------------------T-------AA
s Acinonyx_jubatus.LLWD01001279.1                           816481  3 -   1699592 a----------------------g-------t-
i Acinonyx_jubatus.LLWD01001279.1                        I 1 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506434  3 -  29979442 a----------------------t-------g-
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 1 C 0
s Ailurus_fulgens.LNAC01001112.1                             74721  3 -    347723 A----------------------T-------G-
i Ailurus_fulgens.LNAC01001112.1                         I 1 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64455  3 -     89534 C----------------------A-------A-
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 74
s Allenopithecus_nigroviridis.k141_3361533                    8800  4 -     52922 A----------------------T-------AA
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          8725  4 -     28001 A----------------------T-------AA
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           8851  4 -      9772 A----------------------T-------AA
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                              8  4 -     12518 A----------------------T-------AA
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          674755  3 -   2318259 a----------------------a-------a-
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      182631  3 +    412891 A----------------------T-------G-
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97206  3 -    100397 A----------------------A-------A-
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       6730  1 +     20879 G--------------------------------
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 28
s Arctocebus_calabarensis.k141_1894080                        5459  4 +      5713 g----------------------a-------ga
i Arctocebus_calabarensis.k141_1894080                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  1983  3 +     43469 A----------------------T-------G-
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  48766  4 -     92717 g----------------------a-------ag
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              49363  4 +     85213 g----------------------a-------ag
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191047  3 +  23207421 a----------------------a-------t-
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         1513  3 -     18090 a----------------------a-------t-
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    25677  3 +     34529 A----------------------A-------A-
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    198427  3 -    288883 a----------------------a-------a-
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20271626  3 +  48749331 A----------------------A-------A-
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1124182  3 -   1948126 a----------------------a-------a-
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18082264  3 +  45695690 a----------------------a-------a-
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2817755  3 +   4408762 A----------------------A-------A-
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998400  3 -  17673402 a----------------------a-------t-
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2330864  3 -   7040546 a----------------------a-------t-
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399140  3 -   1652518 a----------------------a-------t-
i Camelus_ferus.KB017975.1                               C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496168  3 +  63665305 a----------------------a-------g-
i Canis_lupus_orion.HG994398.1                           I 1 C 0
s Capra_aegagrus.CM003241.1                               18828873  3 +  46296322 a----------------------a-------a-
i Capra_aegagrus.CM003241.1                              I 1 C 0
s Capra_hircus.CM004588.1                                 18059593  3 -  44709034 a----------------------a-------a-
i Capra_hircus.CM004588.1                                I 1 C 0
s Capromys_pilorides.CapPil_scaffold_65020                     493  1 -     12242 A--------------------------------
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 17
s Carlito_syrichta.NW_007259797.1                           140193  4 -    496798 g----------------------a-------ag
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2401  3 -     11696 A----------------------T-------G-
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133174  3 +    179628 G----------------------G-------A-
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 23
s Catagonus_wagneri.CatWag_scaffold_2839                     88211  2 +    217609 -----------------------T-------A-
i Catagonus_wagneri.CatWag_scaffold_2839                 I 9 C 0
s Cavia_aperea.AVPZ01000300.1                             18346995  3 -  23392119 a----------------------g-------a-
i Cavia_aperea.AVPZ01000300.1                            C 0 I 24
s Cavia_porcellus.DS562891.1                              18359255  3 -  23407841 a----------------------g-------a-
i Cavia_porcellus.DS562891.1                             C 0 I 24
s Cavia_tschudii.CavTsc_scaffold_8919                        98130  3 +    143979 A----------------------G-------A-
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 I 24
s Cephalopachus_bancanus.k141_2037105                         4089  4 -      8605 g----------------------a-------ag
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227374  1 +  27778364 a--------------------------------
i Ceratotherium_simum.JH767749.1                         C 0 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2092  1 -      3715 A--------------------------------
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 I 1
s Cercocebus_atys.KQ010504.1                               4469769  4 +   4669795 a----------------------t-------aa
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8318  4 -     19203 A----------------------T-------AA
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           2737  4 +      8260 A----------------------C-------AA
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           2967  4 +     27781 A----------------------T-------AA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3113  4 -     20310 A----------------------T-------AA
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6097  4 +     29689 A----------------------T-------AA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             450  4 +      9989 A----------------------T-------AA
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           8785  4 -     27936 A----------------------T-------AA
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             8804  4 -     11289 A----------------------T-------AA
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811180  4 +  39242232 A----------------------T-------AA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21216871  4 -  21565898 A----------------------T-------AA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       33991  4 -     53127 A----------------------T-------AA
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1283  4 +      7159 A----------------------T-------AA
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        8796  4 -     27947 A----------------------T-------AA
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          8772  4 +     17596 A----------------------T-------AA
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39266  4 -     41420 A----------------------T-------AA
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4015  4 -      6351 G---------------------AT-------G-
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_1490224                            61113  4 +     61209 g----------------------a-------aG
i Cheirogaleus_major.k141_1490224                        C 0 C 0
s Cheirogaleus_medius.k141_1055463                           11489  4 +     57038 g----------------------a-------ga
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chlorocebus_aethiops.ctg25                              18422735  4 -  18827391 A----------------------T-------AA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9178  4 -     50209 A----------------------T-------AA
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416183  4 + 135778131 a----------------------t-------aa
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 14641  4 +     19366 G---------------------AT-------G-
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            169744  4 +    839153 G---------------------AT-------G-
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1904706  4 +   2368649 a----------------------t-------aa
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944324  4 + 200372422 A----------------------T-------AA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31218  4 +     84244 A----------------------T-------AA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545477  2 -  53390261 a----------------------a---------
i Condylura_cristata.JH655891.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_603213               632  3 +      1923 A----------------------A-------G-
i Crocidura_indochinensis.CroInd_scaffold_603213         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             17490  3 -     87169 A----------------------A-------G-
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 1 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    834292  2 +   1526836 -----------------------A-------A-
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 44
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  34899  3 +     51376 A----------------------G-------C-
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 25
s Cuniculus_paca.CunPac_flattened_line_231100                 2373  3 +      5455 A----------------------G-------A-
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 I 25
s Dasyprocta_punctata.DasPun_flattened_line_206793             762  3 +      3576 A----------------------G-------A-
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 I 25
s Dasypus_novemcinctus.JH564415.1                            60192  4 +   2246927 g--a-------------------t-------g-
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532387  4 -  12879189 G----------------------A-------AA
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16810683  3 +  35494412 G----------------------A-------T-
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8627432  3 +  20541912 a----------------------t-------g-
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dipodomys_ordii.KN672350.1                              18895302  2 +  37912305 -----------------------g-------a-
i Dipodomys_ordii.KN672350.1                             I 2 I 31
s Dipodomys_stephensi.DipSte_scaffold_75855                  11498  2 +     14536 -----------------------g-------a-
i Dipodomys_stephensi.DipSte_scaffold_75855              I 2 I 42
s Dicerorhinus_sumatrensis.PEKH010002091.1                  668906  1 +   1390856 a--------------------------------
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 1
s Diceros_bicornis.DicBicMic_scaffold_5955                    1981  1 +    198055 A--------------------------------
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 1
s Dinomys_branickii.DinBra_scaffold_21862                    33824  1 +     67921 A--------------------------------
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 25
s Dolichotis_patagonum.DolPat_scaffold_30833                 31017  3 -     42551 A----------------------G-------A-
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 I 23
s Eidolon_helvum.KE759718.1                                   6945  3 +     11740 a----------------------t-------g-
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       309879  3 +    607251 A----------------------A-------A-
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1088530  1 +  10337057 -----------------------A---------
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16325301  3 -  41312741 a----------------------t-------g-
i Enhydra_lutris.KZ291758.1                              I 1 C 0
s Eptesicus_fuscus.JH977646.1                              2143290  3 -  14770903 a----------------------t-------a-
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279245  3 +   4378816 a----------------------c-------c-
i Equus_asinus.JREZ01000139.1                            C 0 I 1
s Equus_caballus.CM000403.2                               18527066  3 -  39960074 a----------------------c-------c-
i Equus_caballus.CM000403.2                              C 0 I 1
s Equus_przewalskii.KK951119.1                               29081  3 +    498745 a----------------------c-------c-
i Equus_przewalskii.KK951119.1                           C 0 I 1
s Erinaceus_europaeus.JH835339.1                           3320276 25 -   7059049 accacacacacacacattgaaaca-------A-
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21199418  4 -  21539334 A----------------------T-------AA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10359  3 +    133382 A----------------------A-------T-
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24297  3 -     44125 A----------------------A-------T-
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Eulemur_albifrons.k141_342033                               9435  4 -     14127 G----------------------G-------AG
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                2125  4 -     16928 G----------------------G-------AG
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              11156  4 -     25546 G----------------------G-------AA
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             8343  4 +     26330 g----------------------g-------aa
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                  9600  4 +     23973 G----------------------G-------AG
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 8347  4 +     75513 g----------------------g-------ag
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  6295  4 +     97555 g----------------------g-------ag
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                             9229  4 +     26496 G----------------------G-------AG
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_2367191                                  2234  4 +      2552 g----------------------g-------ag
i Eulemur_rufus.k141_2367191                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                               9402  4 +    111500 g----------------------g-------ag
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.KN305074.1                                       144  3 -      2052 a----------------------g-------t-
i Felis_catus.KN305074.1                                 I 1 C 0
s Felis_catus_fca126.CM031415.1                           20184910  3 + 205367284 a----------------------g-------t-
i Felis_catus_fca126.CM031415.1                          I 1 C 0
s Felis_nigripes.FelNig_flattened_line_125938                10024  3 -     11347 A----------------------G-------T-
i Felis_nigripes.FelNig_flattened_line_125938            I 1 C 0
s Fukomys_damarensis.KN121974.1                             848042  3 +   3816255 a----------------------g-------a-
i Fukomys_damarensis.KN121974.1                          C 0 I 24
s Galagoides_demidoff.k141_31856                              2159  4 -      3432 g----------------------a-------aa
i Galagoides_demidoff.k141_31856                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               24954  3 +     26054 G----------------------A-------A-
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     608383  3 -    660261 A----------------------A-------A-
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            29813 15 +     49224 g--a-a-aga-a-a----gaaaga-------a-
i Glis_glis.GliGli_scaffold_19807                        C 0 I 53
s Gorilla_beringei.k141_3596273                               9765  4 -     32273 A----------------------T-------AA
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186331918  4 + 186649187 a----------------------t-------aa
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           2487  4 -     19426 g----------------------a-------ag
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              7633  4 -     15286 g----------------------g-------ag
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                              9252  4 +     18253 g----------------------g-------ag
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                          9374  4 -     41752 g----------------------g-------ag
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                          9196  4 -     16460 g----------------------g-------ag
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               230671  3 +    327341 A----------------------A-------A-
i Helogale_parvula.HelPar_flattened_line_2585            I 1 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17077  3 +     36099 A----------------------A-------A-
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20658932  3 +  22651954 a----------------------g-------a-
i Heterocephalus_glaber.JH602082.1                       C 0 I 25
s Heterohyrax_brucei.HetBruBak_scaffold_173205                2869  1 -      3357 C--------------------------------
i Heterohyrax_brucei.HetBruBak_scaffold_173205           C 0 I 3
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111540  3 +    128679 A----------------------A-------T-
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hoolock_leuconedys.ctg274                                    428752  4 +    630532 A----------------------T-------AA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  32773  3 +     55795 A----------------------A-------G-
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 1 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19375  3 -    143317 A----------------------G-------A-
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 23
s Hylobates_agilis.k141_307679                               11670  4 -     15490 A----------------------T-------AA
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              53675  4 +     67168 A----------------------T-------AA
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189537119  4 - 191637585 A----------------------T-------AA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3330218  4 -  11177569 A----------------------T-------AA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80451  3 +    135385 A----------------------G-------A-
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 40
s Ictidomys_tridecemlineatus.JH393364.1                    7514059  1 -   7955117 -------------------------------a-
i Ictidomys_tridecemlineatus.JH393364.1                  I 52 I 37
s Indri_indri.k141_3655594                                   17623  4 +     31101 g----------------------a-------ag
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               21900  3 +     23964 A----------------------A-------T-
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8270828  3 -   9596543 c----------------------a-------a-
i Jaculus_jaculus.JH725527.1                             C 0 I 66
s Kogia_breviceps.KogBre_flattened_line_192630                1167  3 -      3359 A----------------------A-------C-
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    11421  3 -     42476 A----------------------T-------A-
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15519733  4 -  30322482 G----------------------G-------AG
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6246  4 -     23766 g----------------------a-------ag
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24193  4 +     45836 g----------------------a-------ag
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31103  4 -     32627 g----------------------a-------ag
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Leptonychotes_weddellii.APMU01165359.1                      1474  3 -      1663 a----------------------t-------g-
i Leptonychotes_weddellii.APMU01165359.1                 I 1 C 0
s Lepus_americanus.LepAme_scaffold_107385                     3108  3 -     14121 G----------------------A-------G-
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             266981  3 -    662738 a----------------------a-------t-
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1430935  4 +   1826925 A----------------------T-------TA
i Lophocebus_aterrimus.ctg367                            C 0 I 1
s Loris_lydekkerianus.k141_2539221                             163  4 +     11245 g----------------------a-------aa
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   998998  4 +   6120653 g----------------------a-------aa
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4213984  3 -  43346337 a----------------------a-------t-
i Loxodonta_africana.GL010049.1                          C 0 I 5
s Lycaon_pictus.CM007581.1                                17951179  3 -  59628241 a----------------------a-------g-
i Lycaon_pictus.CM007581.1                               I 1 C 0
s Macaca_arctoides.k141_2326796                               1124  4 +     40492 A----------------------T-------AA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670384  4 +  60120075 A----------------------T-------AA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  6882  4 -     26193 A----------------------T-------AA
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            74673  4 -    114318 A----------------------T-------AA
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   395  4 -     23192 A----------------------T-------AA
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                 9844  4 -     29190 A----------------------T-------AA
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18415  4 +     37952 A----------------------T-------AA
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833503  4 + 187317192 a----------------------t-------aa
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452061  4 -  25927173 a----------------------t-------aa
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74264  4 +     89720 A----------------------T-------AA
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1261  4 +     20474 A----------------------T-------AA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1062  4 -     14993 A----------------------T-------AA
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  323694  4 -    668171 A----------------------T-------AA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15204  4 -     15935 A----------------------T-------AA
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20000  4 -     45290 A----------------------T-------AA
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87085  3 +     94391 A----------------------T-------G-
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23931554  4 -  24302211 A----------------------T-------AA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               345734  4 +    752769 A----------------------T-------AA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15109  3 +    737560 g----------------------a-------g-
i Manis_javanica.JSZB01003497.1                          I 21 C 0
s Manis_pentadactyla.KN006162.1                              46499  3 -    317179 g----------------------a-------g-
i Manis_pentadactyla.KN006162.1                          I 21 C 0
s Marmota_marmota.CZRN01000018.1                          33096906  1 -  40650429 -------------------------------a-
i Marmota_marmota.CZRN01000018.1                         I 52 I 37
s Mellivora_capensis.MelCap_flattened_line_69365              5540  3 +     13704 A----------------------T-------G-
i Mellivora_capensis.MelCap_flattened_line_69365         I 1 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    2568  3 +     10310 A----------------------A-------T-
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18282499  1 -  93316391 g--------------------------------
i Microcebus_murinus.CM007674.1                          C 0 I 208
s Microgale_talazaci.MicTal_scaffold_6613                    14975  2 -    145209 A----------------------A---------
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 9
s Micronycteris_hirsuta.MicHir_scaffold_52381                12948  3 -     19307 A----------------------T-------G-
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1848375  3 +   8254450 a----------------------t-------a-
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32244  3 +     64694 A----------------------T-------A-
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3291  4 -     28506 A----------------------T-------AA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        61721  3 -     63350 A----------------------T-------G-
i Mirounga_angustirostris.MirAng_flattened_line_22144    I 1 C 0
s Mirza_zaza.k141_1511790                                    38496  1 +     38511 A--------------------------------
i Mirza_zaza.k141_1511790                                C 0 N 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26073  3 -    437263 G----------------------A-------T-
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137339 10 -    366855 A----------------------TAAAAAACG-
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_61429                  27017  3 -     27816 A----------------------A-------A-
i Moschus_moschiferus.MosMos_scaffold_61429              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   23844  9 +     37127 A----------------AAAAAAA-------A-
i Mungos_mungo.MunMun_flattened_line_23663               I 1 C 0
s Murina_feae.MurFea_scaffold_85699                           4439  3 +     14753 A----------------------T-------A-
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              1824  3 +     14296 G----------------------A-------A-
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 40
s Mustela_putorius.JH418006.1                               297185  3 -  14710649 a----------------------t-------g-
i Mustela_putorius.JH418006.1                            I 1 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     70636  3 -     80779 A----------------------A-------A-
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 I 33
s Myotis_brandtii.KE162005.1                                277546  3 -  10118263 a----------------------t-------a-
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585118  3 -   6019432 a----------------------t-------a-
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3901335  3 -   4330536 a----------------------t-------a-
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        31884  3 +     33610 A----------------------T-------A-
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              185606  4 +    196477 G---------------------AT-------G-
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nasalis_larvatus.k141_413338                                9304  4 +     21681 A----------------------T-------AA
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20298712  3 +  31847680 a----------------------t-------g-
i Neomonachus_schauinslandi.NINY01007730.1               I 1 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865029  3 +   7148211 G----------------------A-------T-
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    755912  3 +    783361 C----------------------T-------A-
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145387  3 -   9404916 a----------------------a-------a-
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 4 C 0
s Nycticebus_bengalensis.LG01                            102569278  4 - 196305487 a----------------------g-------aa
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_7325916                             4057  4 -      4362 a----------------------g-------aa
i Nycticebus_coucang.k141_7325916                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105733309  4 + 199412804 a----------------------g-------aa
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355220  3 +   3988456 g----------------------a-------a-
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  745921  3 +  11899542 a----------------------g-------c-
i Octodon_degus.JH651603.1                               C 0 I 27
s Odobenus_rosmarus.KB229312.1                              500237  3 -   2017862 a----------------------t-------g-
i Odobenus_rosmarus.KB229312.1                           I 1 C 0
s Odocoileus_virginianus.KZ100018.1                         144254  3 +    630418 A----------------------A-------A-
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          76299  3 -    150152 A----------------------A-------A-
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  2780944  3 -  10937097 a----------------------a-------t-
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6341  2 -     18566 A----------------------A---------
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67143962  3 + 174332312 g----------------------a-------g-
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458144  3 -    559221 g----------------------a-------a-
i Otocyon_megalotis.JAEUCK010005147.1                    I 1 C 0
s Ovis_aries.CM001607.2                                   17584608  3 +  44047080 A----------------------A-------A-
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173029  3 -    191736 A----------------------A-------A-
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    35689  4 +     80009 a----------------------t-------aa
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189136639  4 + 189151597 a----------------------t-------aa
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  140125  3 +    230217 A----------------------G-------T-
i Panthera_onca.PanOnc_flattened_line_3271               I 1 C 0
s Panthera_pardus.KV860321.1                                251654  3 +  18783137 a----------------------g-------t-
i Panthera_pardus.KV860321.1                             I 1 C 0
s Panthera_tigris.KE722367.1                               4710095  3 -   8748460 a----------------------g-------t-
i Panthera_tigris.KE722367.1                             I 1 C 0
s Pantholops_hodgsonii.KE114653.1                          1263962  3 -   2937107 a----------------------a-------a-
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183436876  4 + 183742232 a----------------------t-------ta
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                              938  4 +     20448 A----------------------T-------TA
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20557560  4 +  20919399 A----------------------T-------TA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_4051466                                   1138  4 -      1598 A----------------------T-------TA
i Papio_kindae.k141_4051466                              C 0 C 0
s Papio_papio.k141_802527                                     2970  4 +     27711 A----------------------T-------TA
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  2959  4 +      9205 A----------------------T-------TA
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272       915  3 -     78924 A----------------------A-------G-
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 1 C 0
s Perodicticus_ibeanus.k141_855320                            4147  3 +     13100 g----------------------a--------a
i Perodicticus_ibeanus.k141_855320                       I 3882 C 0
s Perodicticus_potto.k141_1092580                             2518  3 +     25941 g----------------------a--------a
i Perodicticus_potto.k141_1092580                        N 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       24860  3 +     32600 g----------------------g-------a-
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 I 53
s Petromus_typicus.PetTyp_scaffold_42190                     25406  3 -     29689 A----------------------G-------A-
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 I 26
s Phocoena_phocoena.PhoPho_flattened_line_24159               7991  3 +     63832 G----------------------A-------T-
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           37822  4 +     62158 A----------------------T-------AA
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        32551  4 +     89929 A----------------------T-------AA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            33967  4 +     51399 A----------------------T-------AA
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290186  4 -  14605196 a----------------------t-------aa
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_7723             78904  3 +     79650 A----------------------T-------A-
i Pipistrellus_pipistrellus.PipPip_scaffold_7723         C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           33703  3 +     35617 A----------------------A-------T-
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189124728  4 + 189387572 a----------------------t-------aa
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9564571  4 +   9816681 A----------------------T-------AA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               67460  4 -     81375 A----------------------T-------AA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9284  4 +     10147 A----------------------T-------AA
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9477  1 -     22811 C--------------------------------
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 I 3
s Prolemur_simus.MPIZ01000396.1                            2592382  4 -   4620579 g----------------------g-------ag
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     985496  4 +   2598838 g----------------------a-------ag
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          23788  4 +     38485 g----------------------a-------ag
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_1034595                           11875  4 -     12046 g----------------------a-------ag
i Propithecus_diadema.k141_1034595                       C 0 C 0
s Propithecus_edwardsi.k141_1176054                          21316  4 +     35766 G----------------------A-------AG
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1630595                          16563  4 +     17239 g----------------------a-------ag
i Propithecus_perrieri.k141_1630595                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        23322  4 -     67325 G----------------------A-------AG
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Pteronotus_parnellii.KE909381.1                            10721 10 -     21811 a----------------------taaaaaatg-
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36205  3 +     42204 A----------------------T-------G-
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 1 C 0
s Pteropus_alecto.KB030862.1                              22973219  3 +  28871421 a----------------------t-------g-
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1155  3 -      8028 a----------------------t-------g-
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20262630  3 -  38429054 a----------------------g-------t-
i Puma_concolor.QAVW01001104.1                           I 1 C 0
s Pygathrix_cinerea.k141_1153803                              9288  4 -     91421 A----------------------T-------AA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603423  4 +   7812017 A----------------------T-------AA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9260  4 -     72585 A----------------------T-------AA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4502  3 +     55207 A----------------------A-------A-
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinopithecus_bieti.k119_217274                              674  4 -     11128 A----------------------T-------AA
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230052  4 - 195417433 a----------------------t-------aa
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7665760  4 +   7961872 A----------------------T-------AA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84199  3 -     96226 A----------------------T-------G-
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3152  3 +      4321 A----------------------A-------A-
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    150903  2 -    313613 G----------------------T---------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          13803  4 -     19888 A----------------------T-------AA
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21009  4 +     39453 A----------------------T-------AA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            1533  4 +     27826 A----------------------T-------AA
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1053  4 -     19483 A----------------------T-------AA
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1117  4 +      7198 A----------------------T-------AA
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9375  4 +     15514 A----------------------T-------AA
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187211  3 -    191337 A----------------------A-------T-
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13646582  3 -  18376816 a----------------------a-------t-
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1947683  1 -   3870691 -------------------------------a-
i Spermophilus_dauricus.KZ294078.1                       I 52 I 37
s Spilogale_gracilis.SpiGra_flattened_line_13525             26733  3 +     97271 A----------------------T-------G-
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 1 C 0
s Suricata_suricatta.SurSur_flattened_line_6629               6690  1 -    196729 A--------------------------------
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 C 0
s Sus_scrofa.CM000828.4                                   62881714  3 -  69701581 a----------------------t-------a-
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1087357  4 -   1523678 A----------------------T-------AG
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6343  3 +     41958 A----------------------T-------G-
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 68965  4 +    116680 G---------------------AT-------G-
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      114699  7 -    156842 A---------------------TAAAA----T-
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 1
s Tapirus_terrestris.TapTer_scaffold_755                    383162  7 +    539355 A---------------------TAAAA----T-
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 1
s Tarsius_lariang.k141_1598868                                9080  4 -     11412 G----------------------A-------AG
i Tarsius_lariang.k141_1598868                           C 0 C 0
s Tarsius_wallacei.k141_780063                               13796  4 +     25099 g----------------------a-------ag
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422385  4 + 186847797 a----------------------t-------ta
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              102561  3 +    114563 A----------------------G-------A-
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 25
s Tolypeutes_matacus.TolMat_scaffold_228639                   1015  4 +      8208 G---------------------AT-------G-
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78488  3 +    610378 A----------------------T-------G-
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          5111  4 -     20410 A----------------------T-------AA
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9305  4 +     15221 A----------------------T-------AA
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5211  4 +     19930 A----------------------T-------AA
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       1639  4 -     19997 A----------------------T-------AA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            41759  4 -     60166 A----------------------T-------AA
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9232  4 -     27529 A----------------------T-------AA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9168  4 -     18194 A----------------------T-------AA
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           2907  4 -     21137 A----------------------T-------AA
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    1607  4 -     10723 A----------------------T-------AA
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                          763  4 +      9834 A----------------------T-------AA
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19077  4 +     32220 A----------------------T-------AA
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933175  4 +   6242583 A----------------------T-------AA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2421  4 +     20839 A----------------------T-------AA
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_124071                    187  1 -      2171 A--------------------------------
i Tragulus_javanicus.TraJav_scaffold_124071              C 0 C 0
s Trichechus_manatus.JH594705.1                            4291887  3 +  10818551 a----------------------t-------a-
i Trichechus_manatus.JH594705.1                          C 0 I 5
s Tupaia_chinensis.KB320699.1                              2149095  3 +   4065304 a----------------------a-------a-
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     2718  3 -     10553 A----------------------A-------A-
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737191  3 +  33153633 a----------------------a-------t-
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   51033  2 -     77625 A----------------------A---------
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4846433  3 -   5085361 a----------------------t-------g-
i Ursus_maritimus.KK499267.1                             I 1 C 0
s Varecia_rubra.k141_590885                                   7075  4 +     50397 g----------------------g-------aG
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              7123  4 +     24756 g----------------------g-------ag
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5367889  3 -   5488506 a----------------------t-------t-
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  6819  3 -     43706 a----------------------a-------g-
i Vulpes_lagopus.VulLag_flattened_line_30954             I 1 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19193  3 -     24430 g----------------------a-------a-
i Xerus_inauris.XerIna_scaffold_48378                    C 0 I 39
s Zalophus_californianus.ZalCal_flattened_line_63728          1367  3 +      2932 A----------------------T-------G-
i Zalophus_californianus.ZalCal_flattened_line_63728     I 1 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9460  2 +     63895 c----------------------a---------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 68
s Ziphius_cavirostris.ZipCav_flattened_line_71469            10883  3 +     12536 A----------------------A-------T-
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Sigmodon_hispidus.SigHis_scaffold_60841                     9288 65 -     12148 I
e Rhinolophus_sinicus.LVEH01000134.1                        366452  2 -   3329780 I
e Rattus_norvegicus.chr8                                 113027613 89 - 133307652 I
e Psammomys_obesus.NESX01036370.1                             5351 75 -     21651 I
e Propithecus_verreauxi.k141_1019028                         13038  0 -     13615 C
e Peromyscus_maniculatus.KI615324.1                       18187348 73 -  18517816 I
e Onychomys_torridus.OnyTor_scaffold_2986                    74552 75 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16452 75 +     28053 I
e Nannospalax_galili.KL204047.1                            2024989 53 -   3037898 I
e Microtus_ochrogaster.CM001695.1                         11256137 59 -  27267610 I
e Mesocricetus_auratus.KB708134.1                         12177738 75 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27709 76 +    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                         6350  2 -    207569 I
e Lepilemur_septentrionalis.k141_185316                      22230 48 +     54090 I
e Hipposideros_galeritus.HipGal_scaffold_29171               39343  2 +     43066 I
e Hipposideros_armiger.JXIK01000431.1                       107904  2 +   1711038 I
e Graphiurus_murinus.GraMur_scaffold_10447                   29599  5 +     78134 I
e Ellobius_talpinus.LOJH01123422.1                            3156 75 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12206 75 -    110024 I
e Cricetulus_griseus.LT883664.1                           11663396 74 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46406 70 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          10033  2 -     20389 I
e Chinchilla_lanigera.JH722012.1                           1248034 23 +   2543920 I
e Canis_lupus_familiaris.chr16                            17954931 69 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9030672 64 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    181284 65 -    185531 I
e CanFam4.chr16                                           17795221 72 -  60362399 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66158 79 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                        331  3 +     62944 T---------AA
s Allenopithecus_nigroviridis.k141_3361533                    8804  3 -     52922 T---------AA
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          8729  3 -     28001 T---------AA
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           8855  3 -      9772 T---------AA
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                             12  3 -     12518 T---------AA
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Arctocebus_calabarensis.k141_1894080                        5463  3 +      5713 g---------aa
i Arctocebus_calabarensis.k141_1894080                   C 0 I 23
s Avahi_laniger.k141_765380                                  48770  3 -     92717 g---------aa
i Avahi_laniger.k141_765380                              C 0 I 19
s Avahi_peyrierasi.k141_1424874                              49367  3 +     85213 g---------aa
i Avahi_peyrierasi.k141_1424874                          C 0 I 19
s Carlito_syrichta.NW_007259797.1                           140197  3 -    496798 g---------aa
i Carlito_syrichta.NW_007259797.1                        C 0 I 53
s Cephalopachus_bancanus.k141_2037105                         4093  3 -      8605 g---------aa
i Cephalopachus_bancanus.k141_2037105                    C 0 I 76
s Cercocebus_atys.KQ010504.1                               4469773  3 +   4669795 t---------aa
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8322  3 -     19203 T---------AA
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           2741  3 +      8260 T---------AA
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           2971  3 +     27781 T---------AA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3117  3 -     20310 T---------AA
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6101  3 +     29689 T---------AA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             454  3 +      9989 T---------AA
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           8789  3 -     27936 T---------AA
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             8808  3 -     11289 T---------AA
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811184  3 +  39242232 T---------AA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21216875  3 -  21565898 T---------AA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       33995  3 -     53127 T---------AA
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1287  3 +      7159 T---------AA
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        8800  3 -     27947 T---------AA
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          8776  3 +     17596 T---------AA
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39270  3 -     41420 T---------AA
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Cheirogaleus_major.k141_1490224                            61117  3 +     61209 g---------aa
i Cheirogaleus_major.k141_1490224                        C 0 I 44
s Cheirogaleus_medius.k141_1055463                           11493  3 +     57038 g---------ag
i Cheirogaleus_medius.k141_1055463                       C 0 I 46
s Chlorocebus_aethiops.ctg25                              18422739  3 -  18827391 T---------AA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9182  3 -     50209 T---------AA
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416187  3 + 135778131 t---------aa
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1904710  3 +   2368649 t---------aa
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944328  3 + 200372422 T---------AA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31222  3 +     84244 T---------AA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532391  3 -  12879189 G---------AA
i Daubentonia_madagascariensis.ctg71                     C 0 I 15
s Erythrocebus_patas.Contig38                             21199422  3 -  21539334 T---------AA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                               9439  3 -     14127 G---------GA
i Eulemur_albifrons.k141_342033                          C 0 I 6
s Eulemur_collaris.k141_377015                                2129  3 -     16928 G---------GA
i Eulemur_collaris.k141_377015                           C 0 I 17
s Eulemur_coronatus.k141_885031                              11160  3 -     25546 G---------GA
i Eulemur_coronatus.k141_885031                          C 0 I 15
s Eulemur_flavifrons.k141_1184614                             8347  3 +     26330 g---------ga
i Eulemur_flavifrons.k141_1184614                        C 0 I 13
s Eulemur_fulvus.k141_544389                                  9604  3 +     23973 G---------GA
i Eulemur_fulvus.k141_544389                             C 0 I 17
s Eulemur_macaco.k141_1562045                                 8351  3 +     75513 g---------ga
i Eulemur_macaco.k141_1562045                            C 0 I 9
s Eulemur_mongoz.k141_232305                                  6299  3 +     97555 g---------ga
i Eulemur_mongoz.k141_232305                             C 0 I 17
s Eulemur_rubriventer.k141_571033                             9233  3 +     26496 G---------GA
i Eulemur_rubriventer.k141_571033                        C 0 I 5
s Eulemur_rufus.k141_2367191                                  2238  3 +      2552 g---------ga
i Eulemur_rufus.k141_2367191                             C 0 I 21
s Eulemur_sanfordi.k141_1122526                               9406  3 +    111500 g---------ga
i Eulemur_sanfordi.k141_1122526                          C 0 I 17
s Galagoides_demidoff.k141_31856                              2163  3 -      3432 a---------aa
i Galagoides_demidoff.k141_31856                         C 0 I 265
s Gorilla_beringei.k141_3596273                               9769  3 -     32273 T---------AA
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186331922  3 + 186649187 t---------aa
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           2491  3 -     19426 g---------ga
i Hapalemur_alaotrensis.k141_170648                      C 0 I 19
s Hapalemur_gilberti.k141_488810                              7637  3 -     15286 g---------ga
i Hapalemur_gilberti.k141_488810                         C 0 I 15
s Hapalemur_griseus.k141_1511508                              9256  3 +     18253 g---------ga
i Hapalemur_griseus.k141_1511508                         C 0 I 33
s Hapalemur_meridionalis.k141_248335                          9378  3 -     41752 g---------ga
i Hapalemur_meridionalis.k141_248335                     C 0 I 15
s Hapalemur_occidentalis.k141_907772                          9200  3 -     16460 g---------ga
i Hapalemur_occidentalis.k141_907772                     C 0 I 25
s Hoolock_leuconedys.ctg274                                    428756  3 +    630532 T---------AA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_307679                               11674  3 -     15490 T---------AA
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              53679  3 +     67168 T---------AA
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189537123  3 - 191637585 T---------AA
i Hylobates_pileatus_b.LG02                                     C 0 I 3
s Hylobates_pileatus_a.tarseq_633                            3330222  3 -  11177569 T---------AA
i Hylobates_pileatus_a.tarseq_633                          C 0 I 2
s Indri_indri.k141_3655594                                   17627  3 +     31101 g---------aa
i Indri_indri.k141_3655594                               C 0 I 19
s Lemur_catta.scaffold_24                                 15519737  3 -  30322482 G---------GA
i Lemur_catta.scaffold_24                                C 0 I 16
s Lepilemur_ankaranensis.k141_596936                          6250  3 -     23766 g---------aa
i Lepilemur_ankaranensis.k141_596936                     C 0 I 19
s Lepilemur_dorsalis.k141_577674                             24197  3 +     45836 g---------aa
i Lepilemur_dorsalis.k141_577674                         C 0 I 19
s Lepilemur_ruficaudatus.k141_420445                         31107  3 -     32627 g---------aa
i Lepilemur_ruficaudatus.k141_420445                     C 0 I 19
s Lophocebus_aterrimus.ctg367                              1430940  3 +   1826925 T---------AA
i Lophocebus_aterrimus.ctg367                            I 1 C 0
s Loris_lydekkerianus.k141_2539221                             167  3 +     11245 g---------aa
i Loris_lydekkerianus.k141_2539221                       C 0 I 20
s Loris_tardigradus.ctg83                                   999002  3 +   6120653 g---------aa
i Loris_tardigradus.ctg83                                C 0 I 20
s Macaca_arctoides.k141_2326796                               1128  3 +     40492 T---------AA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670388  3 +  60120075 T---------AA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  6886  3 -     26193 T---------AA
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            74677  3 -    114318 T---------AA
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   399  3 -     23192 T---------AA
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                 9848  3 -     29190 T---------AA
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18419  3 +     37952 T---------AA
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833507  3 + 187317192 t---------aa
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452065  3 -  25927173 t---------aa
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74268  3 +     89720 T---------AA
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1265  3 +     20474 T---------AA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1066  3 -     14993 T---------AA
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  323698  3 -    668171 T---------AA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15208  3 -     15935 T---------AA
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20004  3 -     45290 T---------AA
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23931558  3 -  24302211 T---------AA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               345738  3 +    752769 T---------AA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3295  3 -     28506 T---------AA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Nasalis_larvatus.k141_413338                                9308  3 +     21681 T---------AA
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nycticebus_bengalensis.LG01                            102569282 12 - 196305487 gggagcagggaa
i Nycticebus_bengalensis.LG01                            C 0 I 20
s Nycticebus_coucang.k141_7325916                             4061 12 -      4362 gggagcagggaa
i Nycticebus_coucang.k141_7325916                        C 0 I 20
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105733313 12 + 199412804 gggagcagggaa
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 20
s Pan_paniscus.KQ411613.1                                    35693  3 +     80009 t---------aa
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189136643  3 + 189151597 t---------aa
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                183436880  3 + 183742232 t---------aa
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                              942  3 +     20448 T---------AA
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20557564  3 +  20919399 T---------AA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_4051466                                   1142  3 -      1598 T---------AA
i Papio_kindae.k141_4051466                              C 0 C 0
s Papio_papio.k141_802527                                     2974  3 +     27711 T---------AA
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  2963  3 +      9205 T---------AA
i Papio_ursinus.k141_3428135                             C 0 C 0
s Perodicticus_ibeanus.k141_855320                            4150  3 +     13100 g---------ga
i Perodicticus_ibeanus.k141_855320                       C 0 I 19
s Perodicticus_potto.k141_1092580                             2521  3 +     25941 g---------ga
i Perodicticus_potto.k141_1092580                        C 0 I 16
s Piliocolobus_badius.k141_1234363                           37826  3 +     62158 T---------AA
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        32555  3 +     89929 T---------AA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            33971  3 +     51399 T---------AA
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290190  3 -  14605196 t---------aa
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189124732  3 + 189387572 t---------aa
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9564575  3 +   9816681 T---------AA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               67464  3 -     81375 T---------AA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9288  3 +     10147 T---------AA
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2592386  3 -   4620579 g---------ga
i Prolemur_simus.MPIZ01000396.1                          C 0 I 19
s Propithecus_coquerelli.NW_012148875.1                     985500  3 +   2598838 g---------aa
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 20
s Propithecus_coronatus.k141_347390                          23792  3 +     38485 g---------aa
i Propithecus_coronatus.k141_347390                      C 0 I 18
s Propithecus_diadema.k141_1034595                           11879  3 -     12046 g---------aa
i Propithecus_diadema.k141_1034595                       C 0 N 0
s Propithecus_edwardsi.k141_1176054                          21320  3 +     35766 G---------AA
i Propithecus_edwardsi.k141_1176054                      C 0 I 19
s Propithecus_perrieri.k141_1630595                          16567  3 +     17239 g---------aa
i Propithecus_perrieri.k141_1630595                      C 0 I 19
s Propithecus_tattersalli.k141_790011                        23326  3 -     67325 G---------AA
i Propithecus_tattersalli.k141_790011                    C 0 I 14
s Propithecus_verreauxi.k141_1019028                         13038  3 -     13615 g---------aa
i Propithecus_verreauxi.k141_1019028                     C 0 I 3
s Pygathrix_cinerea.k141_1153803                              9292  3 -     91421 T---------AA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603427  3 +   7812017 T---------AA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9264  3 -     72585 T---------AA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                              678  3 -     11128 T---------AA
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230056  3 - 195417433 t---------aa
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7665764  3 +   7961872 T---------AA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Semnopithecus_entellus.k141_11662                          13807  3 -     19888 T---------AA
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21013  3 +     39453 T---------AA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            1537  3 +     27826 T---------AA
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1057  3 -     19483 T---------AA
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1121  3 +      7198 T---------AA
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9379  3 +     15514 T---------AA
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1087361  3 -   1523678 T---------AA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_1598868                                9084  3 -     11412 G---------AA
i Tarsius_lariang.k141_1598868                           C 0 I 57
s Tarsius_wallacei.k141_780063                               13800  3 +     25099 g---------aa
i Tarsius_wallacei.k141_780063                           C 0 I 61
s Theropithecus_gelada.CM009954.1                        186422389  3 + 186847797 t---------aa
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          5115  3 -     20410 T---------AA
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9309  3 +     15221 T---------AA
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5215  3 +     19930 T---------AA
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       1643  3 -     19997 T---------AA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            41763  3 -     60166 T---------AA
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9236  3 -     27529 T---------AA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9172  3 -     18194 T---------AA
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           2911  3 -     21137 T---------AA
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    1611  3 -     10723 T---------AA
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                          767  3 +      9834 T---------AA
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19081  3 +     32220 T---------AA
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933179  3 +   6242583 T---------AA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2425  3 +     20839 T---------AA
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Varecia_rubra.k141_590885                                   7079  3 +     50397 G---------GA
i Varecia_rubra.k141_590885                              C 0 I 19
s Varecia_variegata.k141_1128296                              7127  3 +     24756 g---------ga
i Varecia_variegata.k141_1128296                         C 0 I 19
e Ziphius_cavirostris.ZipCav_flattened_line_71469            10886  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                       9462 68 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_63728          1370  0 +      2932 C
e Xerus_inauris.XerIna_scaffold_48378                        19196 39 -     24430 I
e Vulpes_lagopus.VulLag_flattened_line_30954                  6822  0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5367892  0 -   5488506 C
e Ursus_maritimus.KK499267.1                               4846436  0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   51035  0 -     77625 C
e Tursiops_truncatus.MRVK01000835.1                       15737194  0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     2721  0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2149098  0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4291890  5 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_124071                    188  0 -      2171 C
e Tonatia_saurophila.TonSau_scaffold_294                     78491  0 +    610378 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   1019  0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              102564 25 +    114563 I
e Tapirus_terrestris.TapTer_scaffold_755                    383169  1 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      114706  1 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 68969  0 +    116680 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                 6346  0 +     41958 C
e Sus_scrofa.CM000828.4                                   62881717  0 -  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629               6691  0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             26736  0 +     97271 C
e Spermophilus_dauricus.KZ294078.1                         1947684 37 -   3870691 I
e Sorex_araneus.JH798187.1                                13646585  0 -  18376816 C
e Solenodon_paradoxus.SolPar_flattened_line_5840            187214  0 -    191337 C
e Sigmodon_hispidus.SigHis_scaffold_60841                     9288 65 -     12148 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    150905  0 -    313613 C
e Saiga_tatarica.SaiTat_scaffold_373180                       3155  0 +      4321 C
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                84202  0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        366452  2 -   3329780 I
e Rattus_norvegicus.chr8                                 113027613 89 - 133307652 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4505  0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20262633  0 -  38429054 C
e Pteropus_vampyrus.KN534172.1                                1158  0 -      8028 C
e Pteropus_alecto.KB030862.1                              22973222  0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         36208  0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            10731  0 -     21811 C
e Psammomys_obesus.NESX01036370.1                             5351 75 -     21651 I
e Procavia_capensis.ProCapCap_scaffold_85530                  9478  3 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           33706  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_7723             78907  0 +     79650 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               7994  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     25409 26 -     29689 I
e Peromyscus_maniculatus.KI615324.1                       18187348 73 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       24863 53 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272       918  0 -     78924 C
e Pantholops_hodgsonii.KE114653.1                          1263965  0 -   2937107 C
e Panthera_tigris.KE722367.1                               4710098  0 -   8748460 C
e Panthera_pardus.KV860321.1                                251657  0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  140128  0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      173032  0 -    191736 C
e Ovis_aries.CM001607.2                                   17584611  0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       458147  0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                        67143965  0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               6343  0 -     18566 C
e Orcinus_orca.KB316932.1                                  2780947  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74552 75 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16452 75 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76302  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         144257  0 +    630418 C
e Odobenus_rosmarus.KB229312.1                              500240  0 -   2017862 C
e Octodon_degus.JH651603.1                                  745924 27 +  11899542 I
e Ochotona_princeps.JH802162.1                             1355223  0 +   3988456 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9145390  0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    755915  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5865032  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20298715  0 +  31847680 C
e Nannospalax_galili.KL204047.1                            2024989 53 -   3037898 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              185610  0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        31887  0 +     33610 C
e Myotis_lucifugus.GL429869.1                              3901338  0 -   4330536 C
e Myotis_davidii.KB100139.1                                1585121  0 -   6019432 C
e Myotis_brandtii.KE162005.1                                277549  0 -  10118263 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70639 33 -     80779 I
e Mustela_putorius.JH418006.1                               297188  0 -  14710649 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              1827 40 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           4442  0 +     14753 C
e Mungos_mungo.MunMun_flattened_line_23663                   23853  0 +     37127 C
e Moschus_moschiferus.MosMos_scaffold_61429                  27020  0 -     27816 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 137349  0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    26076  0 -    437263 C
e Mirounga_angustirostris.MirAng_flattened_line_22144        61724  0 -     63350 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             32247  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1848378  0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11256137 59 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                12951  0 -     19307 C
e Microgale_talazaci.MicTal_scaffold_6613                    14977  9 -    145209 I
e Microcebus_murinus.CM007674.1                           18282500 208 -  93316391 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    2571  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12177738 75 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27709 76 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365              5543  0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                         6350  2 -    207569 I
e Marmota_marmota.CZRN01000018.1                          33096907 37 -  40650429 I
e Manis_pentadactyla.KN006162.1                              46502  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              15112  0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 87088  0 +     94391 C
e Lycaon_pictus.CM007581.1                                17951182  0 -  59628241 C
e Loxodonta_africana.GL010049.1                            4213987  5 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             266984  0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3111  0 -     14121 C
e Leptonychotes_weddellii.APMU01165359.1                      1477  0 -      1663 C
e Lepilemur_septentrionalis.k141_185316                      22230 48 +     54090 I
e Lasiurus_borealis.LasBor_scaffold_32767                    11424  0 -     42476 C
e Kogia_breviceps.KogBre_flattened_line_192630                1170  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8270831 66 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_48101               21903  0 +     23964 C
e Ictidomys_tridecemlineatus.JH393364.1                    7514060 37 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      80454 40 +    135385 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19378 23 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  32776  0 +     55795 C
e Hipposideros_galeritus.HipGal_scaffold_29171               39343  2 +     43066 I
e Hipposideros_armiger.JXIK01000431.1                       107904  2 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               111543  0 +    128679 C
e Heterohyrax_brucei.HetBruBak_scaffold_173205                2870  3 -      3357 I
e Heterocephalus_glaber.JH602082.1                        20658935 25 +  22651954 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17080  0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               230674  0 +    327341 C
e Graphiurus_murinus.GraMur_scaffold_10447                   29599  5 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            29828 53 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608386  0 -    660261 C
e Galeopterus_variegatus.GalVar_scaffold_56069               24957  0 +     26054 C
e Fukomys_damarensis.KN121974.1                             848045 24 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_125938                10027  0 -     11347 C
e Felis_catus_fca126.CM031415.1                           20184913  0 + 205367284 C
e Eubalaena_japonica.EubJap_flattened_line_31514             24300  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           10362  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3320301  0 -   7059049 C
e Equus_przewalskii.KK951119.1                               29084  1 +    498745 I
e Equus_caballus.CM000403.2                               18527069  1 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1279248  1 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2143293  0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16325304  0 -  41312741 C
e Ellobius_talpinus.LOJH01123422.1                            3156 75 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12206 75 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1088531  0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       309882  0 +    607251 C
e Eidolon_helvum.KE759718.1                                   6948  0 +     11740 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 31020 23 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  11500 42 +     14536 I
e Dipodomys_ordii.KN672350.1                              18895304 31 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    33825 25 +     67921 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    1982  1 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  668907  1 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8627435  0 +  20541912 C
e Delphinapterus_leucas.KZ290073.1                        16810686  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            60196  0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793             765 25 +      3576 I
e Cuniculus_paca.CunPac_flattened_line_231100                 2376 25 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  34902 25 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             17493  0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_603213               635  0 +      1923 C
e Cricetulus_griseus.LT883664.1                           11663396 74 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46406 70 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          10033  2 -     20389 I
e Condylura_cristata.JH655891.1                           17545479  0 -  53390261 C
e Choloepus_hoffmanni.KN194906.1                            169748  0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 14645  0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1248034 23 +   2543920 I
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            4019  0 -      6351 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2093  1 -      3715 I
e Cavia_tschudii.CavTsc_scaffold_8919                        98133 24 +    143979 I
e Cavia_porcellus.DS562891.1                              18359258 24 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18346998 24 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     88213  0 +    217609 C
e Castor_canadensis.CasCan_scaffold_2074                    133177 23 +    179628 I
e Carollia_perspicillata.CarPer_scaffold_92756                2404  0 -     11696 C
e Capromys_pilorides.CapPil_scaffold_65020                     494 17 -     12242 I
e Capra_hircus.CM004588.1                                 18059596  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18828876  0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18496171  0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17954931 69 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9030672 64 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    181284 65 -    185531 I
e CanFam4.chr16                                           17795221 72 -  60362399 I
e Camelus_ferus.KB017975.1                                  399143  0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2330867  0 -   7040546 C
e Camelus_bactrianus.KN276810.1                            9998403  0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2817758  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18082267  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1124185  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20271629  0 +  48749331 C
e Bison_bison.KN261452.1                                    198430  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    25680  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         1516  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15191050  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  1986  0 +     43469 C
e Aplodontia_rufa.AprRuf_scaffold_68852                       6731 28 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             97209  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      182634  0 +    412891 C
e Ammotragus_lervia.NIVO01071767.1                          674758  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     64458 74 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             74724  0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9506437  0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     66158 79 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           816484  0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                        334 2 +     62944 AG
s Allenopithecus_nigroviridis.k141_3361533                    8807 2 -     52922 AG
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          8732 2 -     28001 AG
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           8858 2 -      9772 AG
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                             15 2 -     12518 AG
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Arctocebus_calabarensis.k141_288239                        13952 2 +     17124 AG
i Arctocebus_calabarensis.k141_288239                    n 23 I 4
s Avahi_laniger.k141_765380                                  48792 2 -     92717 ag
i Avahi_laniger.k141_765380                              I 19 C 0
s Avahi_peyrierasi.k141_1424874                              49389 2 +     85213 ag
i Avahi_peyrierasi.k141_1424874                          I 19 C 0
s Carlito_syrichta.NW_007259797.1                           140253 2 -    496798 GG
i Carlito_syrichta.NW_007259797.1                        I 53 C 0
s Cephalopachus_bancanus.k141_2037105                         4172 2 -      8605 gg
i Cephalopachus_bancanus.k141_2037105                    I 76 C 0
s Cercocebus_atys.KQ010504.1                               4469776 2 +   4669795 ag
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8325 2 -     19203 AG
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           2744 2 +      8260 AG
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           2974 2 +     27781 AG
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3120 2 -     20310 AG
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6104 2 +     29689 AG
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             457 2 +      9989 AG
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           8792 2 -     27936 AG
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             8811 2 -     11289 AG
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811187 2 +  39242232 AG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21216878 2 -  21565898 AG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       33998 2 -     53127 AG
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1290 2 +      7159 AG
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        8803 2 -     27947 AG
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          8779 2 +     17596 AG
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39273 2 -     41420 AG
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Cheirogaleus_major.k141_1490224                            61164 2 +     61209 gg
i Cheirogaleus_major.k141_1490224                        I 44 I 7
s Cheirogaleus_medius.k141_1055463                           11542 2 +     57038 ag
i Cheirogaleus_medius.k141_1055463                       I 46 I 9
s Chlorocebus_aethiops.ctg25                              18422742 2 -  18827391 AG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9185 2 -     50209 AG
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416190 2 + 135778131 ag
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1904713 2 +   2368649 ag
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944331 2 + 200372422 AG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31225 2 +     84244 AG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Erythrocebus_patas.Contig38                             21199425 2 -  21539334 AG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                               9448 1 -     14127 -G
i Eulemur_albifrons.k141_342033                          I 6 C 0
s Eulemur_collaris.k141_377015                                2149 2 -     16928 AG
i Eulemur_collaris.k141_377015                           I 17 C 0
s Eulemur_coronatus.k141_885031                              11178 2 -     25546 AG
i Eulemur_coronatus.k141_885031                          I 15 C 0
s Eulemur_flavifrons.k141_1184614                             8363 2 +     26330 ag
i Eulemur_flavifrons.k141_1184614                        I 13 C 0
s Eulemur_fulvus.k141_544389                                  9624 2 +     23973 AG
i Eulemur_fulvus.k141_544389                             I 17 C 0
s Eulemur_macaco.k141_1562045                                 8363 2 +     75513 ag
i Eulemur_macaco.k141_1562045                            I 9 C 0
s Eulemur_rubriventer.k141_571033                             9241 2 +     26496 AG
i Eulemur_rubriventer.k141_571033                        I 5 C 0
s Eulemur_rufus.k141_2367191                                  2262 2 +      2552 ag
i Eulemur_rufus.k141_2367191                             I 21 C 0
s Eulemur_sanfordi.k141_1122526                               9426 2 +    111500 ag
i Eulemur_sanfordi.k141_1122526                          I 17 C 0
s Galagoides_demidoff.k141_31856                              2431 2 -      3432 ag
i Galagoides_demidoff.k141_31856                         I 265 I 1
s Gorilla_beringei.k141_3596273                               9772 2 -     32273 AG
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186331925 2 + 186649187 ag
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           2513 2 -     19426 ag
i Hapalemur_alaotrensis.k141_170648                      I 19 C 0
s Hapalemur_gilberti.k141_488810                              7655 2 -     15286 ag
i Hapalemur_gilberti.k141_488810                         I 15 C 0
s Hapalemur_griseus.k141_1511508                              9292 2 +     18253 AG
i Hapalemur_griseus.k141_1511508                         I 33 C 0
s Hapalemur_meridionalis.k141_248335                          9396 2 -     41752 ag
i Hapalemur_meridionalis.k141_248335                     I 15 C 0
s Hapalemur_occidentalis.k141_907772                          9228 2 -     16460 ag
i Hapalemur_occidentalis.k141_907772                     I 25 C 0
s Hoolock_leuconedys.ctg274                                    428759 2 +    630532 AG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_307679                               11677 2 -     15490 AG
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              53682 2 +     67168 AG
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189537129 2 - 191637585 AG
i Hylobates_pileatus_b.LG02                                     I 3 C 0
s Hylobates_pileatus_a.tarseq_633                            3330227 2 -  11177569 AG
i Hylobates_pileatus_a.tarseq_633                          I 2 C 0
s Indri_indri.k141_3655594                                   17649 2 +     31101 ag
i Indri_indri.k141_3655594                               I 19 C 0
s Lemur_catta.scaffold_24                                 15519756 1 -  30322482 -G
i Lemur_catta.scaffold_24                                I 16 C 0
s Lepilemur_ankaranensis.k141_596936                          6272 2 -     23766 ag
i Lepilemur_ankaranensis.k141_596936                     I 19 C 0
s Lepilemur_dorsalis.k141_577674                             24219 2 +     45836 ag
i Lepilemur_dorsalis.k141_577674                         I 19 C 0
s Lepilemur_ruficaudatus.k141_420445                         31129 2 -     32627 ag
i Lepilemur_ruficaudatus.k141_420445                     I 19 C 0
s Lepilemur_septentrionalis.k141_185316                      22278 1 +     54090 -G
i Lepilemur_septentrionalis.k141_185316                  I 48 C 0
s Lophocebus_aterrimus.ctg367                              1430943 2 +   1826925 AG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             190 2 +     11245 ag
i Loris_lydekkerianus.k141_2539221                       I 20 I 1
s Loris_tardigradus.ctg83                                   999025 2 +   6120653 ag
i Loris_tardigradus.ctg83                                I 20 I 1
s Macaca_arctoides.k141_2326796                               1131 2 +     40492 AG
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670391 2 +  60120075 AG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  6889 2 -     26193 AG
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            74680 2 -    114318 AG
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   402 2 -     23192 AG
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                 9851 2 -     29190 AG
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18422 2 +     37952 AG
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833510 2 + 187317192 ag
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452068 2 -  25927173 ag
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74271 2 +     89720 AG
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1268 2 +     20474 AG
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1069 2 -     14993 AG
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  323701 2 -    668171 AG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15211 2 -     15935 AG
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20007 2 -     45290 AG
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23931561 2 -  24302211 AG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               345741 2 +    752769 AG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Microcebus_murinus.CM007674.1                           18282708 2 -  93316391 ag
i Microcebus_murinus.CM007674.1                          I 208 I 3
s Miopithecus_ogouensis.k141_534055                           3298 2 -     28506 AG
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Nasalis_larvatus.k141_413338                                9311 2 +     21681 AG
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nycticebus_bengalensis.LG01                            102569314 2 - 196305487 ag
i Nycticebus_bengalensis.LG01                            I 20 I 1
s Nycticebus_coucang.k141_7325916                             4093 2 -      4362 ag
i Nycticebus_coucang.k141_7325916                        I 20 I 1
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105733345 2 + 199412804 ag
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 20 I 1
s Pan_paniscus.KQ411613.1                                    35696 2 +     80009 ag
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189136646 2 + 189151597 ag
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                183436883 2 + 183742232 ag
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                              945 2 +     20448 AG
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20557567 2 +  20919399 AG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_4051466                                   1145 2 -      1598 AG
i Papio_kindae.k141_4051466                              C 0 C 0
s Papio_papio.k141_802527                                     2977 2 +     27711 AG
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  2966 2 +      9205 AG
i Papio_ursinus.k141_3428135                             C 0 C 0
s Perodicticus_ibeanus.k141_855320                            4172 2 +     13100 aG
i Perodicticus_ibeanus.k141_855320                       I 19 I 1
s Perodicticus_potto.k141_1092580                             2540 2 +     25941 ag
i Perodicticus_potto.k141_1092580                        I 16 I 1
s Piliocolobus_badius.k141_1234363                           37829 2 +     62158 AG
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        32558 2 +     89929 AG
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            33974 2 +     51399 AG
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290193 2 -  14605196 ag
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189124735 2 + 189387572 ag
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9564578 2 +   9816681 AG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               67467 2 -     81375 AA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9291 2 +     10147 AA
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2592408 2 -   4620579 ag
i Prolemur_simus.MPIZ01000396.1                          I 19 C 0
s Propithecus_coquerelli.NW_012148875.1                     985523 1 +   2598838 -g
i Propithecus_coquerelli.NW_012148875.1                  I 20 C 0
s Propithecus_coronatus.k141_347390                          23813 1 +     38485 -a
i Propithecus_coronatus.k141_347390                      I 18 C 0
s Propithecus_diadema.k141_2038140                          143261 2 +    143450 ag
i Propithecus_diadema.k141_2038140                       N 0 C 0
s Propithecus_edwardsi.k141_1176054                          21342 2 +     35766 AG
i Propithecus_edwardsi.k141_1176054                      I 19 C 0
s Propithecus_perrieri.k141_1630595                          16589 2 +     17239 ag
i Propithecus_perrieri.k141_1630595                      I 19 C 0
s Pygathrix_cinerea.k141_1153803                              9295 2 -     91421 AG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603430 2 +   7812017 AG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9267 2 -     72585 AG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                              681 2 -     11128 AG
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230059 2 - 195417433 ag
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7665767 2 +   7961872 AG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Semnopithecus_entellus.k141_11662                          13810 2 -     19888 AG
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21016 2 +     39453 AG
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            1540 2 +     27826 AG
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1060 2 -     19483 AG
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1124 2 +      7198 AG
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9382 2 +     15514 AG
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1087364 2 -   1523678 AG
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_1598868                                9144 2 -     11412 AG
i Tarsius_lariang.k141_1598868                           I 57 C 0
s Tarsius_wallacei.k141_780063                               13864 2 +     25099 ag
i Tarsius_wallacei.k141_780063                           I 61 C 0
s Theropithecus_gelada.CM009954.1                        186422392 2 + 186847797 ag
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          5118 2 -     20410 AG
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9312 2 +     15221 AG
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5218 2 +     19930 AG
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       1646 2 -     19997 AG
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            41766 2 -     60166 AG
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9239 2 -     27529 AG
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9175 2 -     18194 AG
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           2914 2 -     21137 AG
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    1614 2 -     10723 AG
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                          770 2 +      9834 AG
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19084 2 +     32220 AG
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933182 2 +   6242583 AG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2428 2 +     20839 AG
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Varecia_rubra.k141_590885                                   7101 2 +     50397 AG
i Varecia_rubra.k141_590885                              I 19 C 0
s Varecia_variegata.k141_1128296                              7149 2 +     24756 aG
i Varecia_variegata.k141_1128296                         I 19 C 0
e Ziphius_cavirostris.ZipCav_flattened_line_71469            10886 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                       9462 68 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_63728          1370 0 +      2932 C
e Xerus_inauris.XerIna_scaffold_48378                        19196 39 -     24430 I
e Vulpes_lagopus.VulLag_flattened_line_30954                  6822 0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5367892 0 -   5488506 C
e Ursus_maritimus.KK499267.1                               4846436 0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   51035 0 -     77625 C
e Tursiops_truncatus.MRVK01000835.1                       15737194 0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     2721 0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2149098 0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4291890 5 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_124071                    188 0 -      2171 C
e Tonatia_saurophila.TonSau_scaffold_294                     78491 0 +    610378 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   1019 0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              102564 25 +    114563 I
e Tapirus_terrestris.TapTer_scaffold_755                    383169 1 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      114706 1 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 68969 0 +    116680 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                 6346 0 +     41958 C
e Sus_scrofa.CM000828.4                                   62881717 0 -  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629               6691 0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             26736 0 +     97271 C
e Spermophilus_dauricus.KZ294078.1                         1947684 37 -   3870691 I
e Sorex_araneus.JH798187.1                                13646585 0 -  18376816 C
e Solenodon_paradoxus.SolPar_flattened_line_5840            187214 0 -    191337 C
e Sigmodon_hispidus.SigHis_scaffold_60841                     9288 65 -     12148 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    150905 0 -    313613 C
e Saiga_tatarica.SaiTat_scaffold_373180                       3155 0 +      4321 C
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                84202 0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        366452 2 -   3329780 I
e Rattus_norvegicus.chr8                                 113027613 89 - 133307652 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4505 0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20262633 0 -  38429054 C
e Pteropus_vampyrus.KN534172.1                                1158 0 -      8028 C
e Pteropus_alecto.KB030862.1                              22973222 0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         36208 0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            10731 0 -     21811 C
e Psammomys_obesus.NESX01036370.1                             5351 75 -     21651 I
e Propithecus_verreauxi.k141_1019028                         13041 3 -     13615 I
e Propithecus_tattersalli.k141_790011                        23329 14 -     67325 I
e Procavia_capensis.ProCapCap_scaffold_85530                  9478 3 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           33706 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_7723             78907 0 +     79650 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               7994 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     25409 26 -     29689 I
e Peromyscus_maniculatus.KI615324.1                       18187348 73 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       24863 53 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272       918 0 -     78924 C
e Pantholops_hodgsonii.KE114653.1                          1263965 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4710098 0 -   8748460 C
e Panthera_pardus.KV860321.1                                251657 0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  140128 0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      173032 0 -    191736 C
e Ovis_aries.CM001607.2                                   17584611 0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       458147 0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                        67143965 0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               6343 0 -     18566 C
e Orcinus_orca.KB316932.1                                  2780947 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74552 75 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16452 75 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76302 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         144257 0 +    630418 C
e Odobenus_rosmarus.KB229312.1                              500240 0 -   2017862 C
e Octodon_degus.JH651603.1                                  745924 27 +  11899542 I
e Ochotona_princeps.JH802162.1                             1355223 0 +   3988456 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9145390 0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    755915 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5865032 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20298715 0 +  31847680 C
e Nannospalax_galili.KL204047.1                            2024989 53 -   3037898 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              185610 0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        31887 0 +     33610 C
e Myotis_lucifugus.GL429869.1                              3901338 0 -   4330536 C
e Myotis_davidii.KB100139.1                                1585121 0 -   6019432 C
e Myotis_brandtii.KE162005.1                                277549 0 -  10118263 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70639 33 -     80779 I
e Mustela_putorius.JH418006.1                               297188 0 -  14710649 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              1827 40 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           4442 0 +     14753 C
e Mungos_mungo.MunMun_flattened_line_23663                   23853 0 +     37127 C
e Moschus_moschiferus.MosMos_scaffold_61429                  27020 0 -     27816 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 137349 0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    26076 0 -    437263 C
e Mirounga_angustirostris.MirAng_flattened_line_22144        61724 0 -     63350 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             32247 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1848378 0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11256137 59 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                12951 0 -     19307 C
e Microgale_talazaci.MicTal_scaffold_6613                    14977 9 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    2571 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12177738 75 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27709 76 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365              5543 0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                         6350 2 -    207569 I
e Marmota_marmota.CZRN01000018.1                          33096907 37 -  40650429 I
e Manis_pentadactyla.KN006162.1                              46502 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              15112 0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 87088 0 +     94391 C
e Lycaon_pictus.CM007581.1                                17951182 0 -  59628241 C
e Loxodonta_africana.GL010049.1                            4213987 5 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             266984 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3111 0 -     14121 C
e Leptonychotes_weddellii.APMU01165359.1                      1477 0 -      1663 C
e Lasiurus_borealis.LasBor_scaffold_32767                    11424 0 -     42476 C
e Kogia_breviceps.KogBre_flattened_line_192630                1170 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8270831 66 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_48101               21903 0 +     23964 C
e Ictidomys_tridecemlineatus.JH393364.1                    7514060 37 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      80454 40 +    135385 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19378 23 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  32776 0 +     55795 C
e Hipposideros_galeritus.HipGal_scaffold_29171               39343 2 +     43066 I
e Hipposideros_armiger.JXIK01000431.1                       107904 2 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               111543 0 +    128679 C
e Heterohyrax_brucei.HetBruBak_scaffold_173205                2870 3 -      3357 I
e Heterocephalus_glaber.JH602082.1                        20658935 25 +  22651954 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17080 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               230674 0 +    327341 C
e Graphiurus_murinus.GraMur_scaffold_10447                   29599 5 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            29828 53 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608386 0 -    660261 C
e Galeopterus_variegatus.GalVar_scaffold_56069               24957 0 +     26054 C
e Fukomys_damarensis.KN121974.1                             848045 24 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_125938                10027 0 -     11347 C
e Felis_catus_fca126.CM031415.1                           20184913 0 + 205367284 C
e Eulemur_mongoz.k141_232305                                  6302 17 +     97555 I
e Eubalaena_japonica.EubJap_flattened_line_31514             24300 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           10362 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3320301 0 -   7059049 C
e Equus_przewalskii.KK951119.1                               29084 1 +    498745 I
e Equus_caballus.CM000403.2                               18527069 1 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1279248 1 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2143293 0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16325304 0 -  41312741 C
e Ellobius_talpinus.LOJH01123422.1                            3156 75 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12206 75 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1088531 0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       309882 0 +    607251 C
e Eidolon_helvum.KE759718.1                                   6948 0 +     11740 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 31020 23 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  11500 42 +     14536 I
e Dipodomys_ordii.KN672350.1                              18895304 31 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    33825 25 +     67921 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    1982 1 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  668907 1 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8627435 0 +  20541912 C
e Delphinapterus_leucas.KZ290073.1                        16810686 0 +  35494412 C
e Daubentonia_madagascariensis.ctg71                      12532394 15 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            60196 0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793             765 25 +      3576 I
e Cuniculus_paca.CunPac_flattened_line_231100                 2376 25 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  34902 25 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             17493 0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_603213               635 0 +      1923 C
e Cricetulus_griseus.LT883664.1                           11663396 74 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46406 70 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          10033 2 -     20389 I
e Condylura_cristata.JH655891.1                           17545479 0 -  53390261 C
e Choloepus_hoffmanni.KN194906.1                            169748 0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 14645 0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1248034 23 +   2543920 I
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            4019 0 -      6351 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2093 1 -      3715 I
e Cavia_tschudii.CavTsc_scaffold_8919                        98133 24 +    143979 I
e Cavia_porcellus.DS562891.1                              18359258 24 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18346998 24 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     88213 0 +    217609 C
e Castor_canadensis.CasCan_scaffold_2074                    133177 23 +    179628 I
e Carollia_perspicillata.CarPer_scaffold_92756                2404 0 -     11696 C
e Capromys_pilorides.CapPil_scaffold_65020                     494 17 -     12242 I
e Capra_hircus.CM004588.1                                 18059596 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18828876 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18496171 0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17954931 69 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9030672 64 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    181284 65 -    185531 I
e CanFam4.chr16                                           17795221 72 -  60362399 I
e Camelus_ferus.KB017975.1                                  399143 0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2330867 0 -   7040546 C
e Camelus_bactrianus.KN276810.1                            9998403 0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2817758 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18082267 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1124185 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20271629 0 +  48749331 C
e Bison_bison.KN261452.1                                    198430 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    25680 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         1516 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15191050 0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  1986 0 +     43469 C
e Aplodontia_rufa.AprRuf_scaffold_68852                       6731 28 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             97209 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      182634 0 +    412891 C
e Ammotragus_lervia.NIVO01071767.1                          674758 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     64458 74 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             74724 0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9506437 0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     66158 79 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           816484 0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                        336  3 +     62944 A--------A-A
s Acinonyx_jubatus.LLWD01001279.1                           816484  3 -   1699592 a--------a-a
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     66237  3 +     87051 G--------G-A
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 79 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506437  3 -  29979442 a--------a-a
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             74724  3 -    347723 A--------A-A
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64532  3 -     89534 G--------A-G
i Allactaga_bullata.AllBul_scaffold_9566                 I 74 C 0
s Allenopithecus_nigroviridis.k141_3361533                    8809  3 -     52922 A--------A-A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          8734  3 -     28001 A--------A-A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           8860  3 -      9772 A--------A-A
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                             17  3 -     12518 A--------A-A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          674758  3 -   2318259 g--------g-a
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      182634  3 +    412891 A--------C-A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97209  3 -    100397 G--------G-A
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       6759  3 +     20879 T--------G-G
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 28 C 0
s Arctocebus_calabarensis.k141_1894080                        5489 10 +      5713 gagggaaata--
i Arctocebus_calabarensis.k141_1894080                   I 23 n 4
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  1986  3 +     43469 A--------A-A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  48794  3 -     92717 g--------a-a
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              49391  3 +     85213 g--------a-a
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191050  3 +  23207421 a--------g-a
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         1516  3 -     18090 a--------g-a
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    25680  3 +     34529 G--------G-A
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    198430  3 -    288883 g--------g-a
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20271629  3 +  48749331 G--------G-A
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1124185  3 -   1948126 g--------g-a
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18082267  3 +  45695690 g--------g-a
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2817758  3 +   4408762 G--------G-A
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998403  3 -  17673402 g--------g-a
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2330867  3 -   7040546 g--------g-a
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399143  3 -   1652518 g--------g-a
i Camelus_ferus.KB017975.1                               C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496171  3 +  63665305 a--------a-a
i Canis_lupus_orion.HG994398.1                           C 0 I 130
s Capra_aegagrus.CM003241.1                               18828876  3 +  46296322 g--------g-a
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18059596  3 -  44709034 g--------g-a
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                     511  3 -     12242 A--------A-A
i Capromys_pilorides.CapPil_scaffold_65020               I 17 C 0
s Carlito_syrichta.NW_007259797.1                           140255  3 -    496798 A--------A-G
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2404  3 -     11696 A--------A-A
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     88213  3 +    217609 A--------G-A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18347022  3 -  23392119 g--------a-a
i Cavia_aperea.AVPZ01000300.1                            I 24 C 0
s Cavia_porcellus.DS562891.1                              18359282  3 -  23407841 g--------a-a
i Cavia_porcellus.DS562891.1                             I 24 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98157  3 +    143979 G--------A-A
i Cavia_tschudii.CavTsc_scaffold_8919                    I 24 C 0
s Cephalopachus_bancanus.k141_2037105                         4174  3 -      8605 g--------a-g
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227376  3 +  27778364 a--------a-a
i Ceratotherium_simum.JH767749.1                         I 1 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2094  3 -      3715 A--------A-A
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     I 1 C 0
s Cercocebus_atys.KQ010504.1                               4469778  3 +   4669795 a--------a-a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8327  3 -     19203 A--------A-A
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           2746  3 +      8260 A--------A-A
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           2976  3 +     27781 A--------A-A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3122  3 -     20310 A--------A-A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6106  3 +     29689 A--------A-A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             459  3 +      9989 A--------A-A
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           8794  3 -     27936 A--------A-A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             8813  3 -     11289 A--------A-A
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811189  3 +  39242232 A--------A-A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21216880  3 -  21565898 A--------A-A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34000  3 -     53127 A--------A-A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1292  3 +      7159 A--------A-A
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        8805  3 -     27947 A--------A-A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          8781  3 +     17596 A--------A-A
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39275  3 -     41420 A--------A-A
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4019  3 -      6351 A--------A-A
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_1490224                            61173  3 +     61209 g--------a-a
i Cheirogaleus_major.k141_1490224                        I 7 C 0
s Cheirogaleus_medius.k141_1055463                           11553  3 +     57038 g--------a-g
i Cheirogaleus_medius.k141_1055463                       I 9 C 0
s Chinchilla_lanigera.JH722012.1                           1248057  3 +   2543920 a--------a-a
i Chinchilla_lanigera.JH722012.1                         I 23 C 0
s Chlorocebus_aethiops.ctg25                              18422744  3 -  18827391 A--------A-A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9187  3 -     50209 A--------A-A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416192  3 + 135778131 a--------a-a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 14645  3 +     19366 A--------A-T
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            169748  3 +    839153 A--------A-T
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1904715  3 +   2368649 a--------a-a
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944333  3 + 200372422 A--------A-A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31227  3 +     84244 A--------A-A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10035  3 -     20389 A--------A-A
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 2 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 46476  3 +     63868 G--------A-A
i Cricetomys_gambianus.CriGam_scaffold_18520             I 70 C 0
s Cricetulus_griseus.LT883664.1                           11663470  1 + 224834208 -----------a
i Cricetulus_griseus.LT883664.1                          I 74 C 0
s Crocidura_indochinensis.CroInd_scaffold_603213               635  3 +      1923 A--------A-A
i Crocidura_indochinensis.CroInd_scaffold_603213         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             17493  3 -     87169 G--------A-A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  34927  3 +     51376 A--------A-T
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 25 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2401  3 +      5455 A--------A-A
i Cuniculus_paca.CunPac_flattened_line_231100            I 25 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793             790  3 +      3576 A--------A-A
i Dasyprocta_punctata.DasPun_flattened_line_206793       I 25 C 0
s Dasypus_novemcinctus.JH564415.1                            60196  3 +   2246927 a--------a-a
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532409  3 -  12879189 A--------A-A
i Daubentonia_madagascariensis.ctg71                     I 15 C 0
s Delphinapterus_leucas.KZ290073.1                        16810686  3 +  35494412 A--------G-A
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8627435  3 +  20541912 a--------a-a
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  668908  3 +   1390856 a--------a-a
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 1 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    1983  3 +    198055 A--------A-A
i Diceros_bicornis.DicBicMic_scaffold_5955               I 1 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    33850  3 +     67921 A--------A-A
i Dinomys_branickii.DinBra_scaffold_21862                I 25 C 0
s Dipodomys_ordii.KN672350.1                              18895335  3 +  37912305 a--------a-g
i Dipodomys_ordii.KN672350.1                             I 31 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  11542  3 +     14536 a--------a-g
i Dipodomys_stephensi.DipSte_scaffold_75855              I 42 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31043  3 -     42551 G--------A-A
i Dolichotis_patagonum.DolPat_scaffold_30833             I 23 C 0
s Eidolon_helvum.KE759718.1                                   6948  3 +     11740 a--------a-a
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       309882  3 +    607251 G--------G-A
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          12281  3 -    110024 g--------a-a
i Ellobius_lutescens.LOEQ01008920.1                      I 75 C 0
s Ellobius_talpinus.LOJH01123422.1                            3231  3 +      5358 g--------a-a
i Ellobius_talpinus.LOJH01123422.1                       I 75 C 0
s Enhydra_lutris.KZ291758.1                               16325304  3 -  41312741 a--------g-a
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2143293  3 -  14770903 a--------a-a
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279249  3 +   4378816 g--------a-a
i Equus_asinus.JREZ01000139.1                            I 1 C 0
s Equus_caballus.CM000403.2                               18527070  3 -  39960074 g--------a-a
i Equus_caballus.CM000403.2                              I 1 C 0
s Equus_przewalskii.KK951119.1                               29085  3 +    498745 g--------a-a
i Equus_przewalskii.KK951119.1                           I 1 C 0
s Erinaceus_europaeus.JH835339.1                           3320301  3 -   7059049 A--------G-A
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21199427  3 -  21539334 A--------A-A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10362  3 +    133382 A--------G-A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24300  3 -     44125 A--------G-A
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Eulemur_albifrons.k141_342033                               9449  3 -     14127 A--------G-A
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                2151  3 -     16928 A--------G-A
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              11180  3 -     25546 A--------G-A
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             8365  3 +     26330 a--------g-a
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                  9626  3 +     23973 A--------G-A
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 8365  3 +     75513 a--------g-a
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  6319  1 +     97555 -----------a
i Eulemur_mongoz.k141_232305                             I 17 C 0
s Eulemur_rubriventer.k141_571033                             9243  3 +     26496 A--------G-A
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_2367191                                  2264  3 +      2552 a--------g-a
i Eulemur_rufus.k141_2367191                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                               9428  3 +    111500 a--------g-a
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.KN305074.1                                       147  3 -      2052 a--------a-a
i Felis_catus.KN305074.1                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20184913  3 + 205367284 a--------a-a
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_125938                10027  3 -     11347 A--------A-A
i Felis_nigripes.FelNig_flattened_line_125938            C 0 C 0
s Fukomys_damarensis.KN121974.1                             848069  1 +   3816255 -----------a
i Fukomys_damarensis.KN121974.1                          I 24 C 0
s Galagoides_demidoff.k141_31856                              2434  3 -      3432 a--------a-a
i Galagoides_demidoff.k141_31856                         I 1 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               24957  3 +     26054 A--------A-A
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     608386  3 -    660261 G--------G-A
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            29881  1 +     49224 -----------a
i Glis_glis.GliGli_scaffold_19807                        I 53 C 0
s Gorilla_beringei.k141_3596273                               9774  3 -     32273 A--------A-A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186331927  3 + 186649187 a--------a-a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           2515  1 -     19426 -----------a
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              7657  3 -     15286 a--------g-a
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                              9294  3 +     18253 A--------G-A
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                          9398  3 -     41752 a--------g-a
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                          9230  3 -     16460 a--------g-a
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               230674  3 +    327341 G--------A-A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17080  3 +     36099 G--------G-A
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20658960  1 +  22651954 -----------a
i Heterocephalus_glaber.JH602082.1                       I 25 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_173205                2873  3 -      3357 A--------A-A
i Heterohyrax_brucei.HetBruBak_scaffold_173205           I 3 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111543  3 +    128679 A--------G-A
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       107906  3 +   1711038 a--------a-a
i Hipposideros_armiger.JXIK01000431.1                    I 2 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39345  3 +     43066 A--------A-A
i Hipposideros_galeritus.HipGal_scaffold_29171           I 2 C 0
s Hoolock_leuconedys.ctg274                                    428761  3 +    630532 A--------A-A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  32776  3 +     55795 G--------A-A
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19401  3 -    143317 G--------A-A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 23 C 0
s Hylobates_agilis.k141_307679                               11679  3 -     15490 A--------A-A
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              53684  3 +     67168 A--------A-A
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189537131  3 - 191637585 A--------A-A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3330229  3 -  11177569 A--------A-A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80494  3 +    135385 A--------A-A
i Hystrix_cristata.HysCri_scaffold_5660                  I 40 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514097  3 -   7955117 t--------a-g
i Ictidomys_tridecemlineatus.JH393364.1                  I 37 C 0
s Indri_indri.k141_3655594                                   17651  3 +     31101 g--------a-a
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               21903  3 +     23964 A--------G-A
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8270897  1 -   9596543 -----------g
i Jaculus_jaculus.JH725527.1                             I 66 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1170  3 -      3359 A--------G-A
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    11424  3 -     42476 A--------A-A
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15519757  3 -  30322482 A--------G-A
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6274  3 -     23766 g--------g-a
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24221  3 +     45836 g--------g-a
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31131  3 -     32627 g--------g-a
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      22279  3 +     54090 G--------G-A
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.APMU01165359.1                      1477  3 -      1663 a--------a-a
i Leptonychotes_weddellii.APMU01165359.1                 C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     3111  1 -     14121 -----------A
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             266984  3 -    662738 a--------g-a
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1430945  3 +   1826925 A--------A-A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             193  3 +     11245 a--------a-a
i Loris_lydekkerianus.k141_2539221                       I 1 C 0
s Loris_tardigradus.ctg83                                   999028  3 +   6120653 a--------a-a
i Loris_tardigradus.ctg83                                I 1 C 0
s Loxodonta_africana.GL010049.1                            4213992  3 -  43346337 t--------a-t
i Loxodonta_africana.GL010049.1                          I 5 C 0
s Lycaon_pictus.CM007581.1                                17951182  3 -  59628241 a--------a-a
i Lycaon_pictus.CM007581.1                               C 0 I 55
s Macaca_arctoides.k141_2326796                               1133  3 +     40492 A--------A-A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670393  3 +  60120075 A--------A-A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  6891  3 -     26193 A--------A-A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            74682  3 -    114318 A--------A-A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   404  3 -     23192 A--------A-A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                 9853  3 -     29190 A--------A-A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18424  3 +     37952 A--------A-A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833512  3 + 187317192 a--------a-a
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452070  3 -  25927173 a--------a-a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74273  3 +     89720 A--------A-A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1270  3 +     20474 A--------A-A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1071  3 -     14993 A--------A-A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  323703  3 -    668171 A--------A-A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15213  3 -     15935 A--------A-A
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20009  3 -     45290 A--------A-A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87088  3 +     94391 A--------A-A
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23931563  3 -  24302211 A--------A-A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               345743  3 +    752769 A--------A-A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15112  3 +    737560 g--------a-a
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              46502  3 -    317179 g--------a-a
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33096944  3 -  40650429 t--------g-g
i Marmota_marmota.CZRN01000018.1                         I 37 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6352  3 -    207569 A--------A-A
i Megaderma_lyra.MegLyr_scaffold_4542                    I 2 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              5543  3 +     13704 A--------A-A
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 27785  3 +    140813 A--------G-A
i Meriones_unguiculatus.MerUng_scaffold_7390             I 76 C 0
s Mesocricetus_auratus.KB708134.1                         12177813  3 -  29670104 g--------a-a
i Mesocricetus_auratus.KB708134.1                        I 75 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    2571  3 +     10310 A--------G-A
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18282713  3 -  93316391 g--------a-a
i Microcebus_murinus.CM007674.1                          I 3 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                12951  3 -     19307 A--------A-A
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11256196  3 -  27267610 g--------a-a
i Microtus_ochrogaster.CM001695.1                        I 59 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1848378  3 +   8254450 a--------a-a
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32247  3 +     64694 A--------A-A
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3300  3 -     28506 A--------A-A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        61724  3 -     63350 A--------A-A
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26076  3 -    437263 A--------G-A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137349  3 -    366855 A--------A-A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_61429                  27020  3 -     27816 G--------G-A
i Moschus_moschiferus.MosMos_scaffold_61429              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   23853  3 +     37127 G--------A-A
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           4442  3 +     14753 A--------A-A
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              1867  6 +     14296 A-----ACTA-A
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 40 C 0
s Mustela_putorius.JH418006.1                               297188  3 -  14710649 a--------a-a
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     70672  3 -     80779 A--------A-A
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 33 C 0
s Myotis_brandtii.KE162005.1                                277549  3 -  10118263 a--------a-a
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585121  3 -   6019432 a--------a-a
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3901338  3 -   4330536 a--------a-a
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        31887  3 +     33610 A--------A-A
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              185610  3 +    196477 A--------A-A
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025042  3 -   3037898 g--------g-a
i Nannospalax_galili.KL204047.1                          I 53 C 0
s Nasalis_larvatus.k141_413338                                9313  3 +     21681 A--------A-A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20298715  3 +  31847680 a--------a-a
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865032  3 +   7148211 A--------G-A
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    755915  3 +    783361 A--------A-A
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145390  3 -   9404916 a--------a-a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 107
s Nycticebus_bengalensis.LG01                            102569317  3 - 196305487 a--------a-a
i Nycticebus_bengalensis.LG01                            I 1 C 0
s Nycticebus_coucang.k141_7325916                             4096  3 -      4362 a--------a-a
i Nycticebus_coucang.k141_7325916                        I 1 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105733348  3 + 199412804 a--------a-a
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 1 C 0
s Ochotona_princeps.JH802162.1                             1355223  1 +   3988456 -----------a
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  745951  3 +  11899542 a--------a-a
i Octodon_degus.JH651603.1                               I 27 C 0
s Odobenus_rosmarus.KB229312.1                              500240  3 -   2017862 a--------a-a
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         144257  3 +    630418 G--------G-A
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          76302  3 -    150152 G--------G-A
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   16527  3 +     28053 G--------A-A
i Ondatra_zibethicus.OndZib_scaffold_46174               I 75 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    74627  3 +    102263 G--------A-G
i Onychomys_torridus.OnyTor_scaffold_2986                I 75 C 0
s Orcinus_orca.KB316932.1                                  2780947  3 -  10937097 a--------g-a
i Orcinus_orca.KB316932.1                                C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67143965  1 + 174332312 -----------a
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458147  3 -    559221 a--------g-a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 105
s Ovis_aries.CM001607.2                                   17584611  3 +  44047080 G--------G-A
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173032  3 -    191736 G--------G-A
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    35698  3 +     80009 a--------a-a
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189136648  3 + 189151597 a--------a-a
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  140128  3 +    230217 A--------A-A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                251657  3 +  18783137 a--------a-a
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4710098  3 -   8748460 g--------a-a
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1263965  3 -   2937107 g--------g-a
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183436885  3 + 183742232 a--------a-a
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                              947  3 +     20448 A--------A-A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20557569  3 +  20919399 A--------A-A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_4051466                                   1147  3 -      1598 A--------A-A
i Papio_kindae.k141_4051466                              C 0 C 0
s Papio_papio.k141_802527                                     2979  3 +     27711 A--------A-A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  2968  3 +      9205 A--------A-A
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272       918  3 -     78924 G--------C-A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            4175  3 +     13100 A--------A-A
i Perodicticus_ibeanus.k141_855320                       I 1 C 0
s Perodicticus_potto.k141_1092580                             2543  3 +     25941 a--------A-A
i Perodicticus_potto.k141_1092580                        I 1 C 0
s Peromyscus_maniculatus.KI615324.1                       18187421  3 -  18517816 a--------a-g
i Peromyscus_maniculatus.KI615324.1                      I 73 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25435  1 -     29689 -----------A
i Petromus_typicus.PetTyp_scaffold_42190                 I 26 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               7994  3 +     63832 A--------G-A
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           37831  3 +     62158 A--------A-A
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        32560  3 +     89929 A--------A-A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            33976  3 +     51399 A--------A-A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290195  3 -  14605196 a--------a-a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_7723             78907  4 +     79650 A--------AAA
i Pipistrellus_pipistrellus.PipPip_scaffold_7723         C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           33706  3 +     35617 A--------G-A
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189124737  3 + 189387572 a--------a-a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9564580  3 +   9816681 A--------A-A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               67469  3 -     81375 A--------A-A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9293  3 +     10147 A--------A-A
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9481  3 -     22811 A--------A-A
i Procavia_capensis.ProCapCap_scaffold_85530             I 3 C 0
s Prolemur_simus.MPIZ01000396.1                            2592410  3 -   4620579 a--------g-a
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     985524  3 +   2598838 g--------a-a
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          23814  2 +     38485 a--------g--
i Propithecus_coronatus.k141_347390                      C 0 I 13
s Propithecus_diadema.k141_2038140                          143263  3 +    143450 g--------a-a
i Propithecus_diadema.k141_2038140                       C 0 C 0
s Propithecus_edwardsi.k141_1176054                          21344  3 +     35766 G--------A-A
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1630595                          16591  3 +     17239 g--------a-a
i Propithecus_perrieri.k141_1630595                      C 0 C 0
s Propithecus_verreauxi.k141_1019028                         13044  1 -     13615 -----------a
i Propithecus_verreauxi.k141_1019028                     I 3 C 0
s Psammomys_obesus.NESX01036370.1                             5426  3 -     21651 a--------g-A
i Psammomys_obesus.NESX01036370.1                        I 75 C 0
s Pteronotus_parnellii.KE909381.1                            10731  3 -     21811 a--------a-a
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36208  3 +     42204 A--------A-A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973222  3 +  28871421 a--------a-a
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1158  3 -      8028 a--------a-a
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20262633  3 -  38429054 a--------a-a
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                              9297  3 -     91421 A--------A-A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603432  3 +   7812017 G--------A-A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9269  3 -     72585 G--------A-A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4505  3 +     55207 G--------G-A
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr8                                 113027702  3 - 133307652 g--------a-a
i Rattus_norvegicus.chr8                                 I 89 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        366454  3 -   3329780 A--------A-A
i Rhinolophus_sinicus.LVEH01000134.1                     I 2 C 0
s Rhinopithecus_bieti.k119_217274                              683  3 -     11128 A--------A-A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230061  3 - 195417433 a--------a-a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7665769  3 +   7961872 A--------A-A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84202  3 -     96226 A--------A-A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3155  3 +      4321 G--------G-A
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 C 0
s Semnopithecus_entellus.k141_11662                          13812  3 -     19888 A--------A-A
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21018  3 +     39453 A--------A-A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            1542  3 +     27826 A--------A-A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1062  3 -     19483 A--------A-A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1126  3 +      7198 A--------A-A
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9384  3 +     15514 A--------A-A
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                     9353  3 -     12148 G--------A-A
i Sigmodon_hispidus.SigHis_scaffold_60841                I 65 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187214  3 -    191337 A--------A-A
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13646585  3 -  18376816 t--------a-a
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1947721  3 -   3870691 t--------g-g
i Spermophilus_dauricus.KZ294078.1                       I 37 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             26736  3 +     97271 A--------A-A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629               6691  1 -    196729 -----------A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   62881717  3 -  69701581 a--------g-a
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1087366  3 -   1523678 A--------A-A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6346  3 +     41958 A--------A-A
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 68969  3 +    116680 A--------A-A
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      114707  3 -    156842 A--------A-A
i Tapirus_indicus.TapInd_scaffold_9301                   I 1 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383170  3 +    539355 A--------A-A
i Tapirus_terrestris.TapTer_scaffold_755                 I 1 C 0
s Tarsius_lariang.k141_1598868                                9146  3 -     11412 A--------A-G
i Tarsius_lariang.k141_1598868                           C 0 C 0
s Tarsius_wallacei.k141_780063                               13866  3 +     25099 a--------a-g
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422394  3 + 186847797 a--------a-a
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              102589  1 +    114563 -----------A
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 25 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   1019  3 +      8208 A--------A-A
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78491  3 +    610378 A--------A-A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          5120  3 -     20410 A--------A-A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9314  3 +     15221 A--------A-A
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5220  3 +     19930 A--------A-A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       1648  3 -     19997 A--------A-A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            41768  3 -     60166 A--------A-A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9241  3 -     27529 A--------A-A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9177  3 -     18194 A--------A-A
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           2916  3 -     21137 A--------A-A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    1616  3 -     10723 A--------A-A
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                          772  3 +      9834 A--------A-A
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19086  3 +     32220 A--------A-A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933184  3 +   6242583 A--------A-A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2430  3 +     20839 A--------A-A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_124071                    188  2 -      2171 ---------G-A
i Tragulus_javanicus.TraJav_scaffold_124071              C 0 C 0
s Trichechus_manatus.JH594705.1                            4291895  3 +  10818551 a--------a-a
i Trichechus_manatus.JH594705.1                          I 5 C 0
s Tupaia_chinensis.KB320699.1                              2149098  7 +   4065304 g---ta-gta-a
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     2721  7 -     10553 G----TAGTA-A
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737194  3 +  33153633 a--------g-a
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Ursus_maritimus.KK499267.1                               4846436  3 -   5085361 a--------a-a
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   7103  3 +     50397 A--------G-A
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              7151  3 +     24756 a--------g-a
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5367892  3 -   5488506 g--------g-a
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  6822  3 -     43706 a--------a-a
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 91
s Xerus_inauris.XerIna_scaffold_48378                        19235  3 -     24430 T--------G-G
i Xerus_inauris.XerIna_scaffold_48378                    I 39 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1370  3 +      2932 A--------A-A
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9530  3 +     63895 g--------a-g
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 68 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            10886  3 +     12536 A--------G-A
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Uropsilus_gracilis.UroGra_scaffold_12083                   51035  0 -     77625 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    150905  0 -    313613 C
e Propithecus_tattersalli.k141_790011                        23329 14 -     67325 I
e Perognathus_longimembris.PerPac_flattened_line_34437       24863 53 +     32600 I
e Orycteropus_afer.OryAfe_flattened_line_144387               6343  0 -     18566 C
e Microgale_talazaci.MicTal_scaffold_6613                    14977  9 -    145209 I
e Graphiurus_murinus.GraMur_scaffold_10447                   29599  5 +     78134 I
e Elephantulus_edwardii.JH947257.1                         1088531  0 +  10337057 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Condylura_cristata.JH655891.1                           17545479  0 -  53390261 C
e Castor_canadensis.CasCan_scaffold_2074                    133177 23 +    179628 I
e Canis_lupus_familiaris.chr16                            17954931 69 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9030672 64 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    181284 65 -    185531 I
e CanFam4.chr16                                           17795221 72 -  60362399 I

a score=0.000000
s hg38.chrUn_KI270753v1                                        339 1 +     62944 A
s Acinonyx_jubatus.LLWD01001279.1                           816487 1 -   1699592 a
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     66240 1 +     87051 A
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506440 1 -  29979442 a
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             74727 1 -    347723 A
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64535 1 -     89534 A
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    8812 1 -     52922 A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          8737 1 -     28001 A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           8863 1 -      9772 A
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                             20 1 -     12518 A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          674761 1 -   2318259 a
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      182637 1 +    412891 A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 17
s Antilocapra_americana.AntAmePen_scaffold_12469             97212 1 -    100397 A
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       6762 1 +     20879 A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        13958 1 +     17124 T
i Arctocebus_calabarensis.k141_288239                    I 4 I 23
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  1989 1 +     43469 A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  48797 1 -     92717 g
i Avahi_laniger.k141_765380                              C 0 I 13
s Avahi_peyrierasi.k141_1424874                              49394 1 +     85213 g
i Avahi_peyrierasi.k141_1424874                          C 0 I 41
s Balaenoptera_acutorostrata.KI537508.1                   15191053 1 +  23207421 a
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         1519 1 -     18090 a
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    25683 1 +     34529 A
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    198433 1 -    288883 a
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20271632 1 +  48749331 A
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1124188 1 -   1948126 a
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18082270 1 +  45695690 a
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2817761 1 +   4408762 A
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998406 1 -  17673402 a
i Camelus_bactrianus.KN276810.1                          C 0 I 17
s Camelus_dromedarius.KN272107.1                           2330870 1 -   7040546 a
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399146 1 -   1652518 a
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795293 1 -  60362399 a
i CanFam4.chr16                                          I 72 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181349 1 -    185531 a
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 65 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9030736 1 -   9314153 a
i Canis_lupus_dingo.QKWQ01000480.1                       I 64 C 0
s Canis_lupus_familiaris.chr16                            17955000 1 -  59632846 a
i Canis_lupus_familiaris.chr16                           I 69 C 0
s Canis_lupus_orion.HG994398.1                            18496304 1 +  63665305 a
i Canis_lupus_orion.HG994398.1                           I 130 C 0
s Capra_aegagrus.CM003241.1                               18828879 1 +  46296322 a
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18059599 1 -  44709034 a
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                     514 1 -     12242 A
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           140258 1 -    496798 A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2407 1 -     11696 A
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     88216 1 +    217609 A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18347025 1 -  23392119 g
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18359285 1 -  23407841 g
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98160 1 +    143979 G
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         4177 1 -      8605 a
i Cephalopachus_bancanus.k141_2037105                    C 0 I 9
s Ceratotherium_simum.JH767749.1                          12227379 1 +  27778364 a
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2097 1 -      3715 A
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4469781 1 +   4669795 a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8330 1 -     19203 A
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           2749 1 +      8260 A
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           2979 1 +     27781 A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3125 1 -     20310 A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6109 1 +     29689 A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             462 1 +      9989 A
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           8797 1 -     27936 A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             8816 1 -     11289 A
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811192 1 +  39242232 A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21216883 1 -  21565898 A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34003 1 -     53127 A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1295 1 +      7159 A
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        8808 1 -     27947 A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          8784 1 +     17596 A
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39278 1 -     41420 A
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4022 1 -      6351 A
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_1490224                            61176 1 +     61209 g
i Cheirogaleus_major.k141_1490224                        C 0 N 0
s Cheirogaleus_medius.k141_1055463                           11556 1 +     57038 a
i Cheirogaleus_medius.k141_1055463                       C 0 I 27
s Chinchilla_lanigera.JH722012.1                           1248060 1 +   2543920 a
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18422747 1 -  18827391 A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9190 1 -     50209 A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416195 1 + 135778131 a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 14648 1 +     19366 A
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            169751 1 +    839153 A
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1904718 1 +   2368649 a
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944336 1 + 200372422 A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31230 1 +     84244 A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10038 1 -     20389 A
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 46479 1 +     63868 A
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11663471 1 + 224834208 a
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_603213               638 1 +      1923 A
i Crocidura_indochinensis.CroInd_scaffold_603213         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             17496 1 -     87169 A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  34930 1 +     51376 A
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2404 1 +      5455 A
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793             793 1 +      3576 A
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            60199 1 +   2246927 a
i Dasypus_novemcinctus.JH564415.1                        C 0 I 2
s Daubentonia_madagascariensis.ctg71                      12532412 1 -  12879189 G
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16810689 1 +  35494412 A
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8627438 1 +  20541912 a
i Desmodus_rotundus.KZ672289.1                           C 0 I 17
s Dicerorhinus_sumatrensis.PEKH010002091.1                  668911 1 +   1390856 a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    1986 1 +    198055 A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    33853 1 +     67921 A
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18895338 1 +  37912305 a
i Dipodomys_ordii.KN672350.1                             C 0 I 5
s Dipodomys_stephensi.DipSte_scaffold_75855                  11545 1 +     14536 a
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 I 7
s Dolichotis_patagonum.DolPat_scaffold_30833                 31046 1 -     42551 G
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE759718.1                                   6951 1 +     11740 a
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       309885 1 +    607251 A
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          12284 1 -    110024 a
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01123422.1                            3234 1 +      5358 a
i Ellobius_talpinus.LOJH01123422.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16325307 1 -  41312741 a
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2143296 1 -  14770903 a
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279252 1 +   4378816 a
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527073 1 -  39960074 a
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29088 1 +    498745 a
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3320304 1 -   7059049 A
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21199430 1 -  21539334 A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10365 1 +    133382 A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24303 1 -     44125 A
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Eulemur_albifrons.k141_342033                               9452 1 -     14127 G
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_coronatus.k141_885031                              11183 1 -     25546 G
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             8368 1 +     26330 g
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_macaco.k141_1562045                                 8368 1 +     75513 g
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  6320 1 +     97555 g
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                             9246 1 +     26496 G
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_sanfordi.k141_1122526                               9431 1 +    111500 g
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.KN305074.1                                       150 1 -      2052 a
i Felis_catus.KN305074.1                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20184916 1 + 205367284 a
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_125938                10030 1 -     11347 A
i Felis_nigripes.FelNig_flattened_line_125938            C 0 C 0
s Fukomys_damarensis.KN121974.1                             848070 1 +   3816255 a
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galagoides_demidoff.k141_31856                              2437 1 -      3432 g
i Galagoides_demidoff.k141_31856                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               24960 1 +     26054 A
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     608389 1 -    660261 A
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            29882 1 +     49224 c
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                               9777 1 -     32273 A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186331930 1 + 186649187 a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   29604 1 +     78134 A
i Graphiurus_murinus.GraMur_scaffold_10447               I 5 C 0
s Hapalemur_alaotrensis.k141_170648                           2516 1 -     19426 g
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              7660 1 -     15286 g
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                              9297 1 +     18253 G
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                          9401 1 -     41752 g
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                          9233 1 -     16460 g
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               230677 1 +    327341 A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17083 1 +     36099 A
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20658961 1 +  22651954 a
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_173205                2876 1 -      3357 T
i Heterohyrax_brucei.HetBruBak_scaffold_173205           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111546 1 +    128679 A
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 I 2
s Hipposideros_armiger.JXIK01000431.1                       107909 1 +   1711038 a
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39348 1 +     43066 A
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    428764 1 +    630532 A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  32779 1 +     55795 A
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19404 1 -    143317 G
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_307679                               11682 1 -     15490 A
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              53687 1 +     67168 A
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189537134 1 - 191637585 A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3330232 1 -  11177569 A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80497 1 +    135385 A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514100 1 -   7955117 a
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   17654 1 +     31101 g
i Indri_indri.k141_3655594                               C 0 I 13
s Inia_geoffrensis.IniGeo_flattened_line_48101               21906 1 +     23964 A
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8270898 1 -   9596543 a
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1173 1 -      3359 A
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    11427 1 -     42476 G
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15519760 1 -  30322482 G
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6277 1 -     23766 g
i Lepilemur_ankaranensis.k141_596936                     C 0 I 13
s Lepilemur_dorsalis.k141_577674                             24224 1 +     45836 g
i Lepilemur_dorsalis.k141_577674                         C 0 I 13
s Lepilemur_ruficaudatus.k141_420445                         31134 1 -     32627 g
i Lepilemur_ruficaudatus.k141_420445                     C 0 I 13
s Lepilemur_septentrionalis.k141_185316                      22282 1 +     54090 G
i Lepilemur_septentrionalis.k141_185316                  C 0 I 13
s Leptonychotes_weddellii.APMU01165359.1                      1480 1 -      1663 a
i Leptonychotes_weddellii.APMU01165359.1                 C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     3112 1 -     14121 A
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             266987 1 -    662738 a
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1430948 1 +   1826925 A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             196 1 +     11245 t
i Loris_lydekkerianus.k141_2539221                       C 0 I 10
s Loris_tardigradus.ctg83                                   999031 1 +   6120653 t
i Loris_tardigradus.ctg83                                C 0 I 10
s Loxodonta_africana.GL010049.1                            4213995 1 -  43346337 a
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951240 1 -  59628241 a
i Lycaon_pictus.CM007581.1                               I 55 C 0
s Macaca_arctoides.k141_2326796                               1136 1 +     40492 A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670396 1 +  60120075 A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  6894 1 -     26193 A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            74685 1 -    114318 A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   407 1 -     23192 A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                 9856 1 -     29190 A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18427 1 +     37952 A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833515 1 + 187317192 a
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452073 1 -  25927173 a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74276 1 +     89720 A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1273 1 +     20474 A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1074 1 -     14993 A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  323706 1 -    668171 A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15216 1 -     15935 A
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20012 1 -     45290 A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87091 1 +     94391 A
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23931566 1 -  24302211 A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               345746 1 +    752769 A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15115 1 +    737560 a
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              46505 1 -    317179 a
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33096947 1 -  40650429 a
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6355 1 -    207569 A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              5546 1 +     13704 A
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 27788 1 +    140813 A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12177816 1 -  29670104 a
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    2574 1 +     10310 A
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18282716 1 -  93316391 a
i Microcebus_murinus.CM007674.1                          C 0 I 107
s Micronycteris_hirsuta.MicHir_scaffold_52381                12954 1 -     19307 A
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 17
s Microtus_ochrogaster.CM001695.1                         11256199 1 -  27267610 a
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1848381 1 +   8254450 a
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32250 1 +     64694 A
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3303 1 -     28506 A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        61727 1 -     63350 A
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26079 1 -    437263 A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137352 1 -    366855 A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_61429                  27023 1 -     27816 A
i Moschus_moschiferus.MosMos_scaffold_61429              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   23856 1 +     37127 A
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           4445 1 +     14753 A
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              1873 1 +     14296 A
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               297191 1 -  14710649 a
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     70675 1 -     80779 A
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                277552 1 -  10118263 a
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585124 1 -   6019432 a
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3901341 1 -   4330536 a
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        31890 1 +     33610 A
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              185613 1 +    196477 A
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025045 1 -   3037898 a
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                                9316 1 +     21681 A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20298718 1 +  31847680 a
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865035 1 +   7148211 A
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    755918 1 +    783361 A
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145500 1 -   9404916 a
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 107 C 0
s Nycticebus_bengalensis.LG01                            102569320 1 - 196305487 a
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_7325916                             4099 1 -      4362 a
i Nycticebus_coucang.k141_7325916                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105733351 1 + 199412804 a
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355224 1 +   3988456 c
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  745954 1 +  11899542 a
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                              500243 1 -   2017862 a
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         144260 1 +    630418 A
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          76305 1 -    150152 A
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   16530 1 +     28053 A
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    74630 1 +    102263 A
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2780950 1 -  10937097 a
i Orcinus_orca.KB316932.1                                C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67143966 1 + 174332312 a
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458255 1 -    559221 a
i Otocyon_megalotis.JAEUCK010005147.1                    I 105 C 0
s Ovis_aries.CM001607.2                                   17584614 1 +  44047080 A
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173035 1 -    191736 A
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    35701 1 +     80009 a
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189136651 1 + 189151597 a
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  140131 1 +    230217 A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                251660 1 +  18783137 a
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4710101 1 -   8748460 a
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1263968 1 -   2937107 a
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183436888 1 + 183742232 a
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                              950 1 +     20448 A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20557572 1 +  20919399 A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_4051466                                   1150 1 -      1598 A
i Papio_kindae.k141_4051466                              C 0 C 0
s Papio_papio.k141_802527                                     2982 1 +     27711 A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  2971 1 +      9205 A
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272       921 1 -     78924 G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            4178 1 +     13100 T
i Perodicticus_ibeanus.k141_855320                       C 0 I 10
s Perodicticus_potto.k141_1092580                             2546 1 +     25941 T
i Perodicticus_potto.k141_1092580                        C 0 I 10
s Peromyscus_maniculatus.KI615324.1                       18187424 1 -  18517816 a
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25436 1 -     29689 A
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               7997 1 +     63832 A
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           37834 1 +     62158 A
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        32563 1 +     89929 A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            33979 1 +     51399 A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290198 1 -  14605196 a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_7723             78911 1 +     79650 A
i Pipistrellus_pipistrellus.PipPip_scaffold_7723         C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           33709 1 +     35617 A
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189124740 1 + 189387572 a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9564583 1 +   9816681 A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               67472 1 -     81375 A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9296 1 +     10147 A
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9484 1 -     22811 T
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2592413 1 -   4620579 g
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     985527 1 +   2598838 g
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 13
s Propithecus_diadema.k141_2038140                          143266 1 +    143450 g
i Propithecus_diadema.k141_2038140                       C 0 I 33
s Propithecus_edwardsi.k141_1176054                          21347 1 +     35766 G
i Propithecus_edwardsi.k141_1176054                      C 0 I 1
s Propithecus_perrieri.k141_1630595                          16594 1 +     17239 g
i Propithecus_perrieri.k141_1630595                      C 0 I 33
s Propithecus_verreauxi.k141_1019028                         13045 1 -     13615 g
i Propithecus_verreauxi.k141_1019028                     C 0 I 13
s Psammomys_obesus.NESX01036370.1                             5429 1 -     21651 A
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            10734 1 -     21811 a
i Pteronotus_parnellii.KE909381.1                        C 0 I 17
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36211 1 +     42204 A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973225 1 +  28871421 a
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1161 1 -      8028 a
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20262636 1 -  38429054 a
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                              9300 1 -     91421 A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603435 1 +   7812017 A
i Pygathrix_nigripes_b.ctg100                               C 0 I 1
s Pygathrix_nigripes_a.k141_215492                              9272 1 -     72585 A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4508 1 +     55207 A
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr8                                 113027705 1 - 133307652 a
i Rattus_norvegicus.chr8                                 C 0 I 41
s Rhinolophus_sinicus.LVEH01000134.1                        366457 1 -   3329780 A
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                              686 1 -     11128 A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230064 1 - 195417433 a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7665772 1 +   7961872 A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84205 1 -     96226 A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3158 1 +      4321 A
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 C 0
s Semnopithecus_entellus.k141_11662                          13815 1 -     19888 A
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21021 1 +     39453 A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            1545 1 +     27826 A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1065 1 -     19483 A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1129 1 +      7198 A
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9387 1 +     15514 A
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                     9356 1 -     12148 A
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187217 1 -    191337 G
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13646588 1 -  18376816 a
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1947724 1 -   3870691 a
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             26739 1 +     97271 A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629               6692 1 -    196729 A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   62881720 1 -  69701581 a
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1087369 1 -   1523678 A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6349 1 +     41958 A
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 68972 1 +    116680 A
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      114710 1 -    156842 A
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383173 1 +    539355 A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1598868                                9149 1 -     11412 A
i Tarsius_lariang.k141_1598868                           C 0 C 0
s Tarsius_wallacei.k141_780063                               13869 1 +     25099 A
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422397 1 + 186847797 a
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              102590 1 +    114563 A
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   1022 1 +      8208 A
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78494 1 +    610378 A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 17
s Trachypithecus_auratus.k141_722599                          5123 1 -     20410 A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9317 1 +     15221 A
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5223 1 +     19930 A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       1651 1 -     19997 A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            41771 1 -     60166 A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9244 1 -     27529 A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9180 1 -     18194 A
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           2919 1 -     21137 A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    1619 1 -     10723 A
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                          775 1 +      9834 A
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19089 1 +     32220 A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933187 1 +   6242583 A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2433 1 +     20839 A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_124071                    190 1 -      2171 T
i Tragulus_javanicus.TraJav_scaffold_124071              C 0 C 0
s Trichechus_manatus.JH594705.1                            4291898 1 +  10818551 a
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2149105 1 +   4065304 a
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     2728 1 -     10553 A
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737197 1 +  33153633 a
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Ursus_maritimus.KK499267.1                               4846439 1 -   5085361 a
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   7106 1 +     50397 G
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              7154 1 +     24756 g
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5367895 1 -   5488506 a
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  6916 1 -     43706 a
i Vulpes_lagopus.VulLag_flattened_line_30954             I 91 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19238 1 -     24430 A
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1373 1 +      2932 A
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9533 1 +     63895 a
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            10889 1 +     12536 G
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Uropsilus_gracilis.UroGra_scaffold_12083                   51035 0 -     77625 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    150905 0 -    313613 C
e Propithecus_tattersalli.k141_790011                        23329 14 -     67325 I
e Propithecus_coronatus.k141_347390                          23816 13 +     38485 I
e Perognathus_longimembris.PerPac_flattened_line_34437       24863 53 +     32600 I
e Orycteropus_afer.OryAfe_flattened_line_144387               6343 0 -     18566 C
e Microgale_talazaci.MicTal_scaffold_6613                    14977 9 -    145209 I
e Eulemur_rufus.k141_2367191                                  2267 0 +      2552 C
e Eulemur_fulvus.k141_544389                                  9629 0 +     23973 C
e Eulemur_collaris.k141_377015                                2154 0 -     16928 C
e Elephantulus_edwardii.JH947257.1                         1088531 0 +  10337057 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Condylura_cristata.JH655891.1                           17545479 0 -  53390261 C
e Castor_canadensis.CasCan_scaffold_2074                    133177 23 +    179628 I

a score=0.000000
s hg38.chrUn_KI270753v1                                        340 47 +     62944 CA----TTTAACT-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
s Acinonyx_jubatus.LLWD01001279.1                           816488 35 -   1699592 ta----tttcacc-----------T-GG-AA----AA----CA-----A--------------------T--AAATGT-----G-----T--------------------T------------GTC-TAT
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     66241 35 +     87051 TA----TTCAATG-----------C-TG-AA----AT----AA-----A--------------------T--GAATGC-----T-----T--------------------T------------TTC-TGT
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506441 35 -  29979442 ca----tttcacc-----------T-GG-AA----AA----CA-----A--------------------T--AAATGT-----G-----T--------------------T------------CTC-TAT
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             74728 35 -    347723 CA----TTTCACC-----------T-GG-AA----aa----ca-----a--------------------t--aaatgt-----g-----t--------------------t------------ttc-tat
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64536 34 -     89534 GG----TTT-ACC-----------T-TA-AA----AG----CA-----A--------------------T--GGATGT-----T-----T--------------------T------------CTC-TGT
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    8813 47 -     52922 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TGG-TAT
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          8738 47 -     28001 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           8864 47 -      9772 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                             21 47 -     12518 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          674762 35 -   2318259 ta----tttaaCT-----------T-GG-AA----AA----CA-----C--------------------T--GAATGT-----T-----T--------------------T------------CTT-TAT
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      182655 16 +    412891 ------------------------------------------------------------------------AAATGT-----T-----T------------T-------T------------CTC-TGT
i Anoura_caudifer.AnoCau_scaffold_1412                   I 17 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97213 35 -    100397 TA----TTTAACT-----------T-GG-AA----AA----CA-----C--------------------T--GAATGT-----T-----T--------------------T------------CTT-TAT
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       6763 47 +     20879 CA----TTTAACC-----------T-GG-AA----AC----CA-----A--------------------A--GACTTT-----T-----T--------------------TTGTTTGTTTTGTTTT-GGT
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 2
s Arctocebus_calabarensis.k141_683797                         3167 27 -      3778 --------ccttc-----------t-gt-aa----aa----aagacaga--------------------t--gaatgg----------------------------------------------------
i Arctocebus_calabarensis.k141_683797                    n 23 n 23
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  1990 17 +     43469 CA----TTTAACT-----------T-GG-AA----AA----C----------------------------------------------------------------------------------------
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 16
s Avahi_laniger.k141_765380                                  48811 35 -     92717 ca----tttaacc-----------t-gg-aa----aa----ca-----a--------------------t--gactgt-----t-----t--------------------t------------ctc-TGC
i Avahi_laniger.k141_765380                              I 13 C 0
s Avahi_peyrierasi.k141_1424874                              49436 35 +     85213 ca----tttaacc-----------t-gg-aa----aa----ca-----a--------------------t--gactgt-----t-----t--------------------t------------ctc-tgC
i Avahi_peyrierasi.k141_1424874                          I 41 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191054 35 +  23207421 ca----cttAACT-----------T-GA-AA----AA----CA-----C--------------------T--GAGTGT-----T-----T--------------------T------------CTC-TAT
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         1520 35 -     18090 ca----cttAACT-----------T-GA-AA----AA----CA-----C--------------------T--GAGTGT-----T-----T--------------------T------------CTC-TAT
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    25684 35 +     34529 TA----TTTAACT-----------T-GG-AA----AA----CA-----C--------------------T--GAATGT-----T-----T--------------------T------------CTT-TAT
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    198434 35 -    288883 ta----tttaACT-----------T-GG-AA----AA----CA-----C--------------------T--GAATGT-----T-----T--------------------T------------CTT-Tat
i Bison_bison.KN261452.1                                 C 0 I 290
s Bos_indicus.CM003047.1                                  20271633 35 +  48749331 TA----TTTAACT-----------T-GG-AA----AA----CA-----C--------------------T--GAATGT-----T-----T--------------------T------------CTT-Tat
i Bos_indicus.CM003047.1                                 C 0 I 296
s Bos_mutus.JH880303.1                                     1124189 35 -   1948126 ta----tttaaCT-----------T-GG-AA----AA----CA-----C--------------------T--GAATGT-----T-----T--------------------T------------CTT-Tat
i Bos_mutus.JH880303.1                                   C 0 I 296
s Bos_taurus.CM000203.6                                   18082271 35 +  45695690 ta----tttaACT-----------T-GG-AA----AA----CA-----C--------------------T--GAATGT-----T-----T--------------------T------------CTT-tat
i Bos_taurus.CM000203.6                                  C 0 I 296
s Bubalus_bubalis.KI419123.1                               2817762 35 +   4408762 TA----TTTAACT-----------T-GG-AA----AA----CA-----C--------------------T--GAATGT-----T-----T--------------------T------------CTT-tat
i Bubalus_bubalis.KI419123.1                             C 0 I 295
s Camelus_bactrianus.KN276810.1                            9998424 17 -  17673402 ------------------------------------------------C--------------------T--GAATGT-----T-----T--------------------T------------CTC-TAT
i Camelus_bactrianus.KN276810.1                          I 17 C 0
s Camelus_dromedarius.KN272107.1                           2330871 17 -   7040546 ta----tttaacc-----------T-GG-AA----AA----C----------------------------------------------------------------------------------------
i Camelus_dromedarius.KN272107.1                         C 0 I 17
s Camelus_ferus.KB017975.1                                  399147 17 -   1652518 ta----tttaacc-----------T-GG-AA----AA----C----------------------------------------------------------------------------------------
i Camelus_ferus.KB017975.1                               C 0 I 17
s CanFam4.chr16                                           17795294 35 -  60362399 aa----TTTTACC-----------T-GG-AA----AG----CA-----A--------------------T--AGATGT-----G-----T--------------------T------------CTC-TGT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181350 35 -    185531 aa----ttttacc-----------t-gg-aa----ag----ca-----a--------------------t--aGATGT-----G-----T--------------------T------------CTC-TGT
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9030737 35 -   9314153 aa----ttttacc-----------t-GG-AA----AG----CA-----A--------------------T--AGATGT-----G-----T--------------------T------------CTC-TGT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955001 35 -  59632846 aa----ttttacc-----------t-GG-AA----AG----CA-----A--------------------T--AGATGT-----G-----T--------------------T------------CTC-TGT
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496305 35 +  63665305 aa----ttttacc-----------t-GG-AA----AG----CA-----A--------------------T--AAATGT-----G-----T--------------------T------------CTC-TGT
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18828880 35 +  46296322 ta----tttaacT-----------T-GG-AA----AA----CA-----C--------------------T--GAATGT-----T-----T--------------------T------------CTT-TAT
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18059600 35 -  44709034 ta----tttaacT-----------T-GG-AA----AA----CA-----C--------------------T--GAATGT-----T-----T--------------------T------------CTT-TAT
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                     515 19 -     12242 CA----TTCCACT-----------T-GG-AA----AC----CA-----T---------------------------------------------------------------------------------
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           140259 35 -    496798 CG----TTTAACC-----------C-GG-AA----GA----CA-----G--------------------C--GAGTGT-----T-----T--------------------T------------CTC-ACT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133200 16 +    179628 ---------------------------------------------------------------------T--GAACGC-----T-----T--------------------T------------CTT-TAT
i Castor_canadensis.CasCan_scaffold_2074                 I 23 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2408 17 -     11696 CA----TTTAACT-----------T-GG-AA----AA----C----------------------------------------------------------------------------------------
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 16
s Catagonus_wagneri.CatWag_scaffold_2839                     88217 19 +    217609 CA----TTTAACC-----------T-GG-AA----AG----CA-----C---------------------------------------------------------------------------------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 17
s Cavia_aperea.AVPZ01000300.1                             18347026 20 -  23392119 aa--a-tttaact-----------t-GG-AA----AC----CA-----T---------------------------------------------------------------------------------
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18359286 20 -  23407841 aa--a-tttaact-----------t-GG-AA----AC----CA-----T---------------------------------------------------------------------------------
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98161 20 +    143979 AA---ATTTAACT-----------T-GG-AA----AC----CA-----T---------------------------------------------------------------------------------
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         4187 25 -      8605 --------------------------gg-aa----ga----ca-----g--------------------C--GAGTGT-----T-----T--------------------T------------CTC-GCT
i Cephalopachus_bancanus.k141_2037105                    I 9 C 0
s Ceratotherium_simum.JH767749.1                          12227380 35 +  27778364 ta----cttaatc-----------t-gG-AA----AA----CA-----A--------------------T--GAATGT-----T-----T--------------------T------------CTC-TAT
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2098 35 -      3715 TA----CTTAATC-----------T-GG-AA----AA----CA-----A--------------------T--GAATGT-----T-----T--------------------T------------CTC-TAT
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4469782 47 +   4669795 ca----tttaacc-----------t-ag-aa----aa----ca-----a--------------------t--aaatgt-----t-----tgtttcaaaatgt--------t------------ttg-taT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8331 47 -     19203 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           2750 47 +      8260 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           2980 47 +     27781 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3126 47 -     20310 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6110 47 +     29689 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             463 47 +      9989 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           8798 47 -     27936 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             8817 47 -     11289 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811193 47 +  39242232 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21216884 47 -  21565898 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34004 47 -     53127 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1296 47 +      7159 CA----TTTAACC-----------T-AG-AA----AC----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        8809 47 -     27947 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          8785 47 +     17596 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39279 47 -     41420 CA----TTTAACC-----------T-AG-AA----AA----CA-----G--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4023 31 -      6351 CA----TTTAACC-----------T-GG-AA----AA----CA-----A--------------------T--GAATAA-----C-----T--------------------t------------ct-----
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16236 34 -     52598 -c----tttaacc-----------t-gg-aa----aa----ca-----a--------------------t--gaatgt-----t-----t--------------------T------------CTC-CAT
i Cheirogaleus_major.k141_333249                         N 0 C 0
s Cheirogaleus_medius.k141_1055463                           11584 35 +     57038 cc----tttaacc-----------t-gg-aa----aa----ca-----a--------------------t--gaatgt-----t-----t--------------------t------------ctc-CAT
i Cheirogaleus_medius.k141_1055463                       I 27 C 0
s Chinchilla_lanigera.JH722012.1                           1248061 19 +   2543920 ta----tttaact-----------t-tg-aa----aC----CG-----T---------------------------------------------------------------------------------
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18422748 47 -  18827391 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9191 47 -     50209 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416196 47 + 135778131 ca----tttaacc-----------t-ag-aa----aa----ca-----a--------------------t--aaatgt-----t-----tgtttcaaaatgt--------t------------ttg-taT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 14649 35 +     19366 CA----TTTAATC-----------T-GG-AA----AA----CA-----A--------------------T--GAATAT-----C-----T--------------------T------------CTG-TAT
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            169752 35 +    839153 CA----TTTAATC-----------T-GG-AA----AA----CA-----A--------------------T--GAATAT-----C-----T--------------------T------------CTG-TAt
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1904719 47 +   2368649 ca----tttaacc-----------t-gg-aa----aa----ca-----a--------------------t--aaatgt-----t-----tgtttcaaaatgt--------t------------ttg-taT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944337 47 + 200372422 CA----TTTAACC-----------T-GG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31231 47 +     84244 CA----TTTAACC-----------T-GG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545479 25 -  53390261 -a----attaacc-----------t-gg-AA----GA----CA-----A--------------------C--AAATGT----------------------------------------------------
i Condylura_cristata.JH655891.1                          C 0 I 8
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10039 35 -     20389 CA----TTTTACT-----------T-GC-AA----AA----CA-----A--------------------T--AAATAT-----T-----T--------------------T------------CTC-TGT
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 46480 35 +     63868 TA----TTCAACA-----------T-TG-AA----AT----AA-----A--------------------T--GGATGC-----T-----T--------------------T------------TTC-TGT
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11663472 35 + 224834208 aa----ttcaaca-----------t-tg-aa----at----aa-----a--------------------t--gaatgt-----g-----t--------------------t------------ttT-TGT
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_603213               639 35 +      1923 TG----TTTAACC-----------T-GG-AA----GC----CA-----G--------------------C--AAATGT-----T-----T--------------------T------------GTC-TAA
i Crocidura_indochinensis.CroInd_scaffold_603213         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             17497 35 -     87169 TA----TTTCAGC-----------T-GG-AA----AA----CA-----A--------------------T--AAATGT-----G-----T--------------------T------------CTC-TAT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            60202 12 +   2246927 ---------------------------------------------------------------------t--gAATAT-----C-----T--------------------T------------TT-----
i Dasypus_novemcinctus.JH564415.1                        I 2 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  34931 19 +     51376 CA----TTCCACT-----------T-GG-AA----AT----CA-----T---------------------------------------------------------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2405 20 +      5455 CA---ATTTAACT-----------T-GG-AA----GC----CA-----T---------------------------------------------------------------------------------
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793             794 20 +      3576 GA---ATTTAATT-----------T-GG-AA----AC----CA-----T---------------------------------------------------------------------------------
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532413 35 -  12879189 CA----TTTAACC-----------T-GG-AA----AA----CA-----A--------------------T--GAATGT-----T-----T--------------------T------------CTC-TAT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16810690 35 +  35494412 CA----CTTAACT-----------T-GA-AA----AA----CA-----C--------------------T--GAGTGT-----T-----T--------------------T------------CTC-TAT
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8627456 16 +  20541912 ------------------------------------------------------------------------aaatgt-----t-----t-------------------tt------------ctc-taT
i Desmodus_rotundus.KZ672289.1                           I 17 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  668912 35 +   1390856 ta----cttaatc-----------t-GG-AA----AA----CA-----A--------------------T--GAATGT-----T-----T--------------------T------------CTC-TAT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    1987 35 +    198055 TA----CTTAATC-----------T-GG-AA----AA----CA-----A--------------------T--GAATGT-----T-----T--------------------T------------CTC-TAT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    33854 19 +     67921 CA----TTTAACT-----------T-TG-AA----AC----CA-----T---------------------------------------------------------------------------------
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18895344 45 +  37912305 --------------------------ag-aa----ag----ca-----agagagagaaagaaagtaacaG--GAATGC-----T-----T--------------------T------------CTC-TAT
i Dipodomys_ordii.KN672350.1                             I 5 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  11553 45 +     14536 --------------------------ag-aa----ag----ca-----agagagagaaagaaagtaacag--gaatgc-----T-----T--------------------T------------CTC-TAT
i Dipodomys_stephensi.DipSte_scaffold_75855              I 7 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31047 20 -     42551 CA---ATTTAACT-----------T-GG-AA----AC----CA-----T---------------------------------------------------------------------------------
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE759718.1                                   6952 35 +     11740 ca----cttaacc-----------t-gg-aa----aa----ca-----a--------------------a--atatgt-----t-----t--------------------t------------ctc-ttt
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       309886 35 +    607251 TA----TTTAACT-----------T-GA-AA----TA----CA-----C--------------------T--GAATGT-----T-----T--------------------T------------CTT-TAT
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1088531 20 +  10337057 ------------------------------------A----TA-----A--------------------T--GGAaat-----t-----t--------------------t------------ttc-aac
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          12285 35 -    110024 aa----ttcaacA-----------T-TG-AA----AT----AA-----G--------------------T--GAATTC-----T-----T--------------------T------------TTC-TAT
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01123422.1                            3235 35 +      5358 aa----ttcaaaa-----------t-ag-aa----at----aa-----a--------------------t--gaattc-----t-----t--------------------T------------TTC-TAT
i Ellobius_talpinus.LOJH01123422.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16325308 28 -  41312741 ca----tttcaCC-----------T-GG-GA----AA----CA-----A--------------------T--AAATGT-----G-----T----------------------------------------
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2143297 17 -  14770903 ca----gttagcc-----------t-gg-aa----aa----c----------------------------------------------------------------------------------------
i Eptesicus_fuscus.JH977646.1                            C 0 I 15
s Equus_asinus.JREZ01000139.1                              1279253 35 +   4378816 ca----tttAACC-----------t-gg-aa----aa----ca-----a--------------------t--gaatat-----t-----t--------------------t------------ctc-tAT
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527074 35 -  39960074 ca----tttAACC-----------T-gg-aa----aa----ca-----a--------------------t--gaatat-----t-----t--------------------t------------ctc-TAT
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29089 35 +    498745 ca----tttAACC-----------T-gg-aa----aa----ca-----a--------------------t--gaatat-----t-----t--------------------t------------ctc-TAT
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3320305 35 -   7059049 CA----TTTATCT-----------T-GT-AA----AG----CA-----A--------------------T--AAGTGA-----T-----T--------------------T------------CTC-TTG
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21199431 47 -  21539334 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10366 35 +    133382 CA----CTTAACT-----------T-GA-AA----AA----CA-----C--------------------T--GAGTGT-----T-----T--------------------T------------CTC-TAT
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24304 35 -     44125 CA----CTTAACT-----------T-GA-AA----AA----CA-----C--------------------T--GAGTGT-----T-----T--------------------T------------CTC-TAT
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.KN305074.1                                       151 35 -      2052 ta----tttcacc-----------T-GG-AA----AA----CA-----A--------------------T--AAATGT-----G-----T--------------------T------------CTC-TAT
i Felis_catus.KN305074.1                                 C 0 I 33
s Felis_catus_fca126.CM031415.1                           20184917 35 + 205367284 ta----tttcacc-----------T-GG-AA----AA----CA-----A--------------------T--AAATGT-----G-----T--------------------T------------CTC-TAT
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_125938                10031 35 -     11347 TA----TTTCACC-----------T-GG-AA----AA----CA-----A--------------------T--AAATGT-----G-----T--------------------T------------CTC-TAT
i Felis_nigripes.FelNig_flattened_line_125938            C 0 C 0
s Fukomys_damarensis.KN121974.1                             848071 19 +   3816255 ca----tttAACC-----------T-GG-AA----AT----CA-----T---------------------------------------------------------------------------------
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galagoides_demidoff.k141_31856                              2438 41 -      3432 aaggaaagaaaca-----------t-ct-aactggat----ca-----a--------------------t--ggatga-----tttctCT----------------------------------------
i Galagoides_demidoff.k141_31856                         C 0 I 2
s Galeopterus_variegatus.GalVar_scaffold_56069               24961 35 +     26054 CA----TTTAACC-----------T-GG-AA----AA----CA-----A--------------------T--GAATGT-----T-----T--------------------T------------CTC-CAT
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     608390 35 -    660261 TA----TTTAACT-----------T-GG-AA----AA----CA-----C--------------------T--GAAAGT-----T-----T--------------------T------------CTT-TAT
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            29883 35 +     49224 ca----tttaacc-----------t-gg-aa----aa----CA-----A--------------------A--GAATGT-----T-----T--------------------T------------CTC-TGT
i Glis_glis.GliGli_scaffold_19807                        C 0 I 2
s Gorilla_beringei.k141_3596273                               9778 47 -     32273 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Gorilla_beringei.k141_3596273                          C 0 I 18
s Gorilla_gorilla.LT578341.1                             186331931 47 + 186649187 ca----tttaacc-----------t-ag-aa----aa----ca-----a--------------------t--aaatgt-----t-----tgtttcaaaatgt--------t------------ttg-tat
i Gorilla_gorilla.LT578341.1                             C 0 I 18
s Graphiurus_murinus.GraMur_scaffold_10447                   29605 35 +     78134 CA----TTTAATC-----------T-AG-AA----AA----CA-----G--------------------A--GAATGT-----T-----T--------------------T------------CTA-TGT
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 2
s Helogale_parvula.HelPar_flattened_line_2585               230678 35 +    327341 TA----TTTCACC-----------T-GG-AA----AA----CA-----A--------------------T--AAATGT-----G-----T--------------------T------------CTC-TAT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17084 35 +     36099 TA----TTTAACT-----------T-GG-AA----AA----CA-----C--------------------T--GAATGT-----T-----T--------------------T------------CTT-TAT
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20658962 19 +  22651954 ca----tttaacc-----------T-AG-AA----AC----Ca-----t---------------------------------------------------------------------------------
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_173205                2877 35 -      3357 CA----TTTTACC-----------T-GG-AG----AA----CA-----A--------------------T--AAATAT-----T-----T--------------------T------------CTC-TAC
i Heterohyrax_brucei.HetBruBak_scaffold_173205           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111549 31 +    128679 --------CAACT-----------T-GA-AA----AA----CA-----C--------------------T--GAGTGC-----T-----T--------------------T------------CTC-TAT
i Hippopotamus_amphibius.HipAmp_scaffold_9076            I 2 C 0
s Hipposideros_armiger.JXIK01000431.1                       107910 35 +   1711038 ta----tttaacc-----------T-GG-AA----AA----CA-----A--------------------T--TAATGG-----T-----T--------------------T------------CTC-TAT
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39349 35 +     43066 CA----TTTAACC-----------T-GG-AA----AA----CA-----A--------------------T--TAATGT-----T-----T--------------------T------------CTC-TAT
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    428765 47 +    630532 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  32780 35 +     55795 TA----TTTCACC-----------T-GG-AA----AA----CA-----A--------------------T--AAATGT-----G-----T--------------------T------------CTC-TAT
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19405 20 -    143317 CA---GTTTAACT-----------T-GG-AA----AC----CA-----T---------------------------------------------------------------------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_307679                               11683 47 -     15490 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              53688 47 +     67168 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189537135 47 - 191637585 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3330233 47 -  11177569 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80498 19 +    135385 CG----TTTCATC-----------T-GG-AA----AC----CA-----T---------------------------------------------------------------------------------
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514101 35 -   7955117 CA----TTTCACT-----------T-GG-AA----AA----CA-----A--------------------T--GGCTGT-----T-----T--------------------T------------CTT-TGT
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 2
s Indri_indri.k141_3655594                                   17668 35 +     31101 ca----tttaacc-----------t-gg-aa----aa----ca-----a--------------------t--gactgt-----t-----t--------------------t------------cTC-TAC
i Indri_indri.k141_3655594                               I 13 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               21907 35 +     23964 CA----CTTAACT-----------T-GA-AA----AA----CA-----C--------------------T--GAGTGT-----T-----T--------------------T------------CTC-TAT
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8270899 33 -   9596543 ta----tCT-ATC-----------C-TA-AA----AG----CA-----A--------------------T--GGATGT-----T-----T--------------------T------------CTC-T-T
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1174 35 -      3359 CA----TTTAACT-----------T-GA-AA----AA----CA-----C--------------------T--GAGTGT-----T-----T--------------------T------------CTC-TAT
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    11428 17 -     42476 CA----TTTAACC-----------T-GG-AA----AA----C----------------------------------------------------------------------------------------
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 21
s Lepilemur_ankaranensis.k141_596936                          6291 35 -     23766 ca----tttaacc-----------t-gg-aa----aa----ca-----a--------------------t--gaatgt-----t-----t--------------------t------------ctc-tAT
i Lepilemur_ankaranensis.k141_596936                     I 13 C 0
s Lepilemur_dorsalis.k141_577674                             24238 35 +     45836 ca----tttaacc-----------t-gg-aa----aa----ca-----a--------------------t--gaatgt-----t-----t--------------------t------------ctc-tAT
i Lepilemur_dorsalis.k141_577674                         I 13 C 0
s Lepilemur_ruficaudatus.k141_420445                         31148 35 -     32627 ca----tttaacc-----------t-gg-aa----aa----ca-----a--------------------t--gaATGT-----T-----T--------------------T------------CTC-TAT
i Lepilemur_ruficaudatus.k141_420445                     I 13 C 0
s Lepilemur_septentrionalis.k141_185316                      22296 35 +     54090 CA----TTTAACC-----------T-GG-AA----AA----CA-----A--------------------T--GAATGT-----T-----T--------------------T------------CTC-TAT
i Lepilemur_septentrionalis.k141_185316                  I 13 C 0
s Leptonychotes_weddellii.APMU01165359.1                      1481 33 -      1663 ca----tttcacc-----------T-GG-AA----AA----CA-----A--------------------T--AAATGT-----G-----T--------------------T--------------C-CAT
i Leptonychotes_weddellii.APMU01165359.1                 C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     3113 35 -     14121 CA----TTTCATC-----------T-GA-AA----AA----CA-----A--------------------T--GAATGT-----T-----G--------------------T------------CTT-TAA
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             266988 35 -    662738 ca----ctTAACT-----------T-GA-AA----AA----CA-----C--------------------T--GAGTGT-----T-----T--------------------T------------CTC-TAT
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1430949 47 +   1826925 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             207 13 +     11245 --------------------------------------------------------------------------atgt-----a-----c--------------------t------------cag-tat
i Loris_lydekkerianus.k141_2539221                       I 10 C 0
s Loris_tardigradus.ctg83                                   999042 13 +   6120653 --------------------------------------------------------------------------atgt-----a-----c--------------------t------------cag-tat
i Loris_tardigradus.ctg83                                I 10 C 0
s Loxodonta_africana.GL010049.1                            4213996 35 -  43346337 ta----tttcacc-----------t-GG-AA----AG----CA-----A--------------------T--GGATGT-----T-----T--------------------T------------CTC-TAC
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951241 35 -  59628241 aa----ttttacc-----------t-GG-AA----AG----CA-----A--------------------T--AAATGT-----G-----T--------------------T------------CTC-TGT
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               1137 47 +     40492 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670397 47 +  60120075 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  6895 47 -     26193 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            74686 47 -    114318 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   408 47 -     23192 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                 9857 47 -     29190 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18428 47 +     37952 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833516 47 + 187317192 ca----tttaacc-----------t-ag-aa----aa----ca-----a--------------------t--agatgt-----t-----tgtttcaaaatgt--------t------------ttg-taT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452074 47 -  25927173 ca----tttaacc-----------t-ag-aa----aa----ca-----a--------------------t--aaatgt-----t-----tgtttcaaaatgt--------t------------ttg-taT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74277 47 +     89720 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1274 47 +     20474 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1075 47 -     14993 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTT-TAT
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  323707 47 -    668171 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15217 47 -     15935 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20013 47 -     45290 CA----CTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87092 36 +     94391 CA----CTTAACC-----------T-GG-TA----AA----CA-----A--------------------A-AAAATGT-----T-----T--------------------T------------CTC-TGT
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23931567 47 -  24302211 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----CGTTTCAAAATGT--------T------------TTG-TAT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               345747 47 +    752769 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15116 35 +    737560 ta----TTTAACC-----------T-GG-AA----AA----CA-----G--------------------T--GAATGC-----T-----T--------------------T------------CTC-TGT
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              46506 35 -    317179 ta----TTTAACC-----------T-GG-AA----AA----CA-----G--------------------T--GAATGC-----T-----T--------------------T------------CTC-TGT
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33096948 31 -  40650429 ca----tt----t-----------t-gg-aa----aa----ca-----a--------------------t--ggCTGT-----T-----T--------------------T------------CTT-TGT
i Marmota_marmota.CZRN01000018.1                         C 0 I 2
s Megaderma_lyra.MegLyr_scaffold_4542                         6356 35 -    207569 CA----TTTAAGC-----------T-GG-CA----AA----CA-----A--------------------T--ACATGT-----T-----T--------------------T------------CTC-TGT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              5547 28 +     13704 CA----TTTCACC-----------T-GG-AA----AA----CA-----A--------------------T--AAATGT-----G-----T----------------------------------------
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 27789 35 +    140813 AA----TTCAACA-----------C-TG-AA----AT----AA-----A--------------------T--AAATGC-----T-----G--------------------T------------TTC-TGT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12177817 35 -  29670104 ta----ctcaaca-----------c-tg-aa----at----aa-----a--------------------a--gaatgt-----g-----t--------------------t------------ttc-tgt
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    2575 35 +     10310 CA----GTTAACT-----------T-GA-AA----AA----CA-----C--------------------T--GAGTGT-----T-----T--------------------T------------CTC-CAT
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18282824 35 -  93316391 cc----tTTAACC-----------T-GG-AA----AA----CA-----A--------------------T--GAATGT-----T-----T--------------------T------------CTC-CAT
i Microcebus_murinus.CM007674.1                          I 107 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                12972 16 -     19307 ------------------------------------------------------------------------AAATGT-----T-----T------------T-------T------------CTC-TAT
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 17 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    14986 16 -    145209 -------TTAACC-----------T-GAAA-----AA----CA-----A---------------------------------------------------------------------------------
i Microgale_talazaci.MicTal_scaffold_6613                I 9 I 12
s Microtus_ochrogaster.CM001695.1                         11256200 35 -  27267610 aa----ttcagCA-----------T-AG-AT----AA----AA-----A--------------------T--GAATCC-----T-----T--------------------T------------TTC-TAT
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1848382 17 +   8254450 ca----tttaacc-----------t-gg-aa----aa----c----------------------------------------------------------------------------------------
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 15
s Miniopterus_schreibersii.MinSch_scaffold_18080             32251 17 +     64694 CA----TTTAACC-----------T-GG-AA----AA----C----------------------------------------------------------------------------------------
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 15
s Miopithecus_ogouensis.k141_534055                           3304 47 -     28506 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTA-TAT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        61728 33 -     63350 CA----TTTCACC-----------T-GG-AA----AA----CA-----A--------------------T--AAATGT-----G-----T--------------------T--------------C-CAT
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      4187 33 -     37649 ------tttaacc-----------t-gg-aa----aa----ca-----A--------------------T--GAATGT-----T-----T--------------------T------------CTC-CAT
i Mirza_zaza.k141_952172                                 N 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26080 35 -    437263 CA----CTTAACT-----------T-GA-AA----AA----CA-----C--------------------T--GAGTGT-----T-----T--------------------T------------CTC-TAT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137353 17 -    366855 CA----TTTACCT-----------T-GG-AA----AA----C----------------------------------------------------------------------------------------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 17
s Moschus_moschiferus.MosMos_scaffold_61429                  27024 35 -     27816 TA----TTTAACT-----------T-GG-AA----AA----CA-----C--------------------T--GAATGT-----T-----T--------------------T------------CTT-TAT
i Moschus_moschiferus.MosMos_scaffold_61429              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   23857 35 +     37127 TA----TTTCACC-----------T-GG-AA----AA----CA-----A--------------------T--AAATGT-----G-----T--------------------T------------CTC-TAT
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           4446 17 +     14753 CA----TTTAACC-----------T-GG-AA----AA----A----------------------------------------------------------------------------------------
i Murina_feae.MurFea_scaffold_85699                      C 0 I 15
s Muscardinus_avellanarius.MusAve_scaffold_82313              1874 35 +     14296 CA----TTTAACT-----------T-AG-AA----AA----CA-----A--------------------A--GTGTGT-----T-----T--------------------T------------CTC-TGT
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 2
s Mustela_putorius.JH418006.1                               297192 28 -  14710649 ca----ttgcaCC-----------T-GG-GA----AA----CA-----A--------------------T--AAATGT-----G-----T----------------------------------------
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     70676 19 -     80779 CA----TTCCACT-----------T-AA-AA----GT----CA-----T---------------------------------------------------------------------------------
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                277553 17 -  10118263 ca----tttaacc-----------t-gg-aa----aa----c----------------------------------------------------------------------------------------
i Myotis_brandtii.KE162005.1                             C 0 I 16
s Myotis_davidii.KB100139.1                                1585125 17 -   6019432 ca----tttaacc-----------t-gg-aa----aa----c----------------------------------------------------------------------------------------
i Myotis_davidii.KB100139.1                              C 0 I 15
s Myotis_lucifugus.GL429869.1                              3901342 17 -   4330536 ca----tttaacc-----------t-gg-aa----aa----c----------------------------------------------------------------------------------------
i Myotis_lucifugus.GL429869.1                            C 0 I 15
s Myotis_myotis.MyoMyo_scaffold_28916                        31891 17 +     33610 CA----TTTAACC-----------T-GG-AA----AA----C----------------------------------------------------------------------------------------
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 I 15
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              185614 35 +    196477 CA----TTCAGCC-----------T-GG-AA----AG----CA-----A--------------------T--GAACAT-----C-----T--------------------T------------CTG-TCT
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025046 35 -   3037898 at----ttTAACC-----------T-TG-AA----AT----AA-----G--------------------T--GAATGT-----T-----T--------------------C------------CTT-TGT
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                                9317 47 +     21681 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20298719 33 +  31847680 ca----tttcacc-----------T-GG-AA----AA----CA-----A--------------------T--AAATGT-----G-----T--------------------T--------------C-CAT
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865036 35 +   7148211 CA----CTTAACT-----------T-GA-AA----AA----CA-----C--------------------T--GAGTGT-----T-----T--------------------T------------CTC-TAT
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    755919 17 +    783361 CT----TTTAACC-----------T-GG-AA----AA----C----------------------------------------------------------------------------------------
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 15
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145501 36 -   9404916 aa--a-ttttacc-----------t-GG-AA----AG----CA-----A--------------------T--AAATGT-----G-----T--------------------T------------CTC-TGT
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102569321 10 - 196305487 aa----aggaggg-----------t---------------------------------------------------------------------------------------------------------
i Nycticebus_bengalensis.LG01                            C 0 I 4738
s Nycticebus_coucang.k141_7325916                             4100 10 -      4362 aa----aggaggg-----------t---------------------------------------------------------------------------------------------------------
i Nycticebus_coucang.k141_7325916                        C 0 N 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105733352 10 + 199412804 aa----aggaggg-----------t---------------------------------------------------------------------------------------------------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 11135
s Ochotona_princeps.JH802162.1                             1355225 35 +   3988456 ca----tttcaCC-----------T-AG-GC----AA----TA-----A--------------------T--GAACTT-----T-----G--------------------T------------CCT-TAT
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  745955 31 +  11899542 ca----ttccagTATGTTTTCACTCATG-AA----AT----CA-----t---------------------------------------------------------------------------------
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                              500244 33 -   2017862 ca----tttcacc-----------T-GG-AA----AA----CA-----A--------------------T--AAGTGT-----G-----T--------------------T--------------C-TAT
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         144261 35 +    630418 TA----TTTAACT-----------T-GG-AA----AA----CA-----C--------------------T--GAATGT-----T-----T--------------------T------------CTT-TAT
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          76306 35 -    150152 TA----TTTAACT-----------T-GG-AA----AA----CA-----C--------------------T--GAATGA-----T-----T--------------------T------------CTT-TAT
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   16531 35 +     28053 AA----TTCAACA-----------T-AG-AA----AT----GA-----A--------------------T--GAATTC-----T-----T--------------------T------------TTC-TAT
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    74631 43 +    102263 AA----TTCAACA-----------T-TG-AA----AT----AA-----A--------------------T--GAATGT-----T-----T------------TTGTTTTTT------------TTC-TGA
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2780951 35 -  10937097 ca----ctTAACT-----------T-GA-AA----AG----CA-----C--------------------T--GGGTGT-----T-----T--------------------T------------CTC-TAT
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6343 31 -     18566 -------GTAACC-----------T-AG-A-----AA----CA-----A--------------------T--TGATGT-----T-----T--------------------T------------CTC-TAC
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67143967 35 + 174332312 ca----tttcACC-----------T-GA-AA----AA----CA-----A--------------------T--GAATAT-----T-----G--------------------T------------ATT-TAA
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458256 35 -    559221 aa----ttttacc-----------t-gG-AA----AG----CA-----A--------------------T--AAATGT-----A-----T--------------------T------------CTC-TGT
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17584615 35 +  44047080 TA----TTTAACT-----------T-GG-AA----AA----CA-----C--------------------T--GAATGT-----T-----T--------------------T------------CTT-TAT
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173036 35 -    191736 TA----TTTAACT-----------T-GG-AA----AA----CA-----C--------------------T--GAATGT-----T-----T--------------------T------------CTT-TAT
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    35702 47 +     80009 ca----tttaacc-----------t-ag-aa----aa----ca-----a--------------------t--aaatgt-----t-----tgtttcaaaatgt--------t------------ttg-tat
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189136652 47 + 189151597 ca----tttaacc-----------t-ag-aa----aa----ca-----a--------------------t--aaatgt-----t-----tgtttcaaaatgt--------t------------ttg-tat
i Pan_troglodytes.CM009242.2                             C 0 N 0
s Panthera_onca.PanOnc_flattened_line_3271                  140132 35 +    230217 TA----TTTCACC-----------T-GG-AA----AA----CA-----A--------------------T--AAATGT-----G-----T--------------------T------------CTC-TAT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                251661 35 +  18783137 ta----tttcacC-----------T-GG-AA----AA----CA-----A--------------------T--AAATGT-----G-----T--------------------T------------CTC-TAT
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4710102 35 -   8748460 ta----tttCACC-----------T-GG-AA----AA----CA-----A--------------------T--AAATGT-----G-----T--------------------T------------CTC-TAT
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1263969 35 -   2937107 ta----tttaaCT-----------T-GG-AA----AA----CA-----C--------------------T--GAATGT-----T-----T--------------------T------------CTT-TAT
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183436889 47 + 183742232 ca----tttaacc-----------t-ag-aa----aa----ca-----a--------------------t--aaatgt-----t-----tgtttcaaaatgt--------t------------ttg-taT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                              951 47 +     20448 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20557573 47 +  20919399 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_4051466                                   1151 47 -      1598 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Papio_kindae.k141_4051466                              C 0 C 0
s Papio_papio.k141_802527                                     2983 47 +     27711 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  2972 47 +      9205 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272       922 35 -     78924 TA----TTTCACC-----------T-GG-TG----AA----CG-----A--------------------T--AAATGT-----G-----T--------------------T------------CTC-TCT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            4189 13 +     13100 --------------------------------------------------------------------------ATGT-----A-----C--------------------T------------CAG-TAT
i Perodicticus_ibeanus.k141_855320                       I 10 C 0
s Perodicticus_potto.k141_1092580                             2557 13 +     25941 --------------------------------------------------------------------------ATGT-----A-----C--------------------T------------CAG-TAt
i Perodicticus_potto.k141_1092580                        I 10 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       24916 16 +     32600 ---------------------------------------------------------------------g--aagtgc-----T-----T--------------------T------------CTC-TAT
i Perognathus_longimembris.PerPac_flattened_line_34437   I 53 C 0
s Peromyscus_maniculatus.KI615324.1                       18187425 19 -  18517816 aa----ttcaacA-----------T-TG-AA----AT----AA-----A---------------------------------------------------------------------------------
i Peromyscus_maniculatus.KI615324.1                      C 0 I 16
s Petromus_typicus.PetTyp_scaffold_42190                     25437  6 -     29689 CA----TG--AA----------------------------------------------------------------------------------------------------------------------
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 I 8
s Phocoena_phocoena.PhoPho_flattened_line_24159               7998 35 +     63832 CA----CTTAACT-----------T-GA-AA----AA----CA-----C--------------------T--GAGTGT-----T-----T--------------------T------------CTC-TAT
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           37835 47 +     62158 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATAT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        32564 47 +     89929 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATAT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            33980 47 +     51399 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATAT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290199 47 -  14605196 ca----tttaacc-----------t-ag-aa----aa----ca-----a--------------------t--aaatat-----t-----tgtttcaaaatgt--------t------------ttg-taT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_7723             78912 17 +     79650 CA----TTTAACC-----------T-GG-AA----AA----C----------------------------------------------------------------------------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_7723         C 0 I 15
s Platanista_gangetica.PlaMin_flattened_line_32310           33710 35 +     35617 CA----CTTAACT-----------T-GA-AA----AA----CA-----C--------------------T--GAGTGT-----T-----T--------------------T------------CTC-TGT
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189124741 47 + 189387572 ca----tttaacc-----------t-ag-aa----aa----ca-----a--------------------t--aaatgt-----t-----tgtttcaaaatgt--------t------------ttg-taT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9564584 47 +   9816681 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               67473 47 -     81375 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9297 47 +     10147 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9485 35 -     22811 CA----TTTTACC-----------T-GG-AG----AA----CA-----A--------------------T--AAATAT-----T-----T--------------------T------------CTC-TAC
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     985541 35 +   2598838 ca----tttAACC-----------T-GG-AA----AA----CA-----A--------------------T--GACTGT-----T-----T--------------------T------------CTG-TAC
i Propithecus_coquerelli.NW_012148875.1                  I 13 C 0
s Propithecus_coronatus.k141_347390                          23829 35 +     38485 ca----tttaacc-----------t-gG-AA----AA----CA-----A--------------------T--GACTGT-----T-----T--------------------T------------CTG-TAC
i Propithecus_coronatus.k141_347390                      I 13 C 0
s Propithecus_diadema.k141_2038140                          143300 35 +    143450 CA----TTTAACC-----------T-GG-AA----AA----CA-----A--------------------T--GACTGT-----T-----T--------------------T------------CTG-TAC
i Propithecus_diadema.k141_2038140                       I 33 N 0
s Propithecus_edwardsi.k141_1176054                          21349 35 +     35766 CA----TTTAACT-----------T-GG-AA----AA----CA-----A--------------------T--GACTGT-----T-----T--------------------T------------CTG-TAC
i Propithecus_edwardsi.k141_1176054                      I 1 C 0
s Propithecus_perrieri.k141_1630595                          16628 35 +     17239 ca----tttaacc-----------t-gg-aa----aa----ca-----a--------------------t--gactGT-----T-----T--------------------T------------CTG-TAC
i Propithecus_perrieri.k141_1630595                      I 33 C 0
s Propithecus_tattersalli.k141_790011                        23343 35 -     67325 CA----TTTAACC-----------T-GG-AA----AA----CA-----A--------------------T--GACTGT-----T-----T--------------------T------------CTG-TAC
i Propithecus_tattersalli.k141_790011                    I 14 C 0
s Propithecus_verreauxi.k141_1019028                         13059 35 -     13615 ca----tttaacc-----------t-gg-aA----AA----CA-----A--------------------T--GACTGT-----T-----T--------------------T------------CTG-TAC
i Propithecus_verreauxi.k141_1019028                     I 13 C 0
s Psammomys_obesus.NESX01036370.1                             5430 35 -     21651 AA----TTcaaca-----------t-tg-aa----at----aa-----a--------------------t--aaatgc-----t-----g--------------------t------------ttc-tgt
i Psammomys_obesus.NESX01036370.1                        C 0 I 1
s Pteronotus_parnellii.KE909381.1                            10752 17 -     21811 ------------------------------------------------------------------------AAGTAT-----T----TT------------T-------T------------CTC-TAT
i Pteronotus_parnellii.KE909381.1                        I 17 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36212 28 +     42204 CA----TTTCACC-----------T-GG-GA----AA----CA-----A--------------------T--AAATGT-----G-----T----------------------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973226 33 +  28871421 ca----cttaacc-----------t-gg-aa----aa----ca-----a--------------------a--a--agt-----t-----t--------------------t------------ctc-TGT
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1162 33 -      8028 ca----cttaacc-----------t-gg-aa----aa----ca-----a--------------------a--a--agt-----t-----t--------------------t------------ctc-TGT
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20262637 35 -  38429054 ta----tttcacc-----------T-GG-GA----AA----CA-----A--------------------T--AAATGT-----G-----T--------------------T------------GTC-TAT
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                              9301 47 -     91421 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603437 47 +   7812017 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATAT--------T------------TTG-TAT
i Pygathrix_nigripes_b.ctg100                               I 1 C 0
s Pygathrix_nigripes_a.k141_215492                              9273 47 -     72585 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4509 35 +     55207 TA----TTTAACT-----------T-GG-AA----TA----CA-----C--------------------T--GAATGT-----T-----T--------------------T------------CTT-TAT
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr8                                  20365579 41 + 133307652 aa----ttcaaca-----------T--G-AA----TTTTTCAA-----A--------------------TTCAAAAGT-----T-----T--------------------T------------ATCTTAT
i Rattus_norvegicus.chr8                                 I 153 I 694
s Rhinolophus_sinicus.LVEH01000134.1                        366458 35 -   3329780 CA----TTTAACC-----------T-GG-AA----AA----CA-----A--------------------T--TAATGT-----T-----T--------------------T------------CTC-TGT
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                              687 47 -     11128 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230065 47 - 195417433 ca----tttaacc-----------t-ag-aa----aa----ca-----a--------------------t--aaatgt-----t-----tgtttcaaaatgt--------t------------ttg-taT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7665773 47 +   7961872 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84206 35 -     96226 CA----CTTAACC-----------T-GG-AA----AA----CA-----A--------------------A--GAATGT-----T-----T--------------------T------------CTC-TGT
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3159 17 +      4321 TA----TTTAACT-----------T-GG-AA----AA----C----------------------------------------------------------------------------------------
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 I 17
s Scalopus_aquaticus.ScaAqu_scaffold_662                    150905 24 -    313613 -G----ATTAACC-----------T-A--AA----GG----CA-----A--------------------C--AAATGT----------------------------------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 8
s Semnopithecus_entellus.k141_11662                          13816 47 -     19888 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21022 47 +     39453 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            1546 47 +     27826 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1066 47 -     19483 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1130 47 +      7198 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9388 47 +     15514 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                     9357  2 -     12148 AA--------------------------------------------------------------------------------------------------------------------------------
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187218 35 -    191337 CA----TTTAACC-----------T-GA-AA----AG----CA-----A--------------------G--GAGTAT-----T-----T--------------------T------------CTC-CAT
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13646589 36 -  18376816 tg----tctaaCC-----------T-GA-AA----AC----TA-----G--------------------T--CGATGT-----T-----T--------------------TT-----------CAC-TAT
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1947725 35 -   3870691 CA----TTTCACT-----------T-GG-AA----AA----CA-----A--------------------T--GGctgt-----t-----t--------------------t------------ctt-tgg
i Spermophilus_dauricus.KZ294078.1                       C 0 I 7
s Spilogale_gracilis.SpiGra_flattened_line_13525             26740 35 +     97271 CA----TTTCACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----G-----T--------------------T------------CTC-TAT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629               6693 35 -    196729 TA----TTTCACC-----------T-GG-AA----AA----CA-----A--------------------T--AAATGT-----G-----T--------------------T------------CTC-TAT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   62881721 35 -  69701581 ca----tttaacC-----------T-GG-AA----AA----CA-----C--------------------T--GAATGT-----T-----T--------------------T------------CTC-TAT
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1087370 47 -   1523678 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6350 17 +     41958 CA----TTTAACC-----------T-GG-AA----AA----C----------------------------------------------------------------------------------------
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 15
s Tamandua_tetradactyla.TamTet_scaffold_1782                 68973 35 +    116680 CA----TTCAGCC-----------C-AG-AA----AC----CA-----A--------------------T--GAACAT-----C-----T--------------------T------------CTG-TCT
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      114711 35 -    156842 TA----TTTAACC-----------T-GG-AA----AA----CT-----A--------------------T--TAATGT-----T-----T--------------------T------------CTC-TAC
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383174 35 +    539355 TA----TTTAACC-----------T-GG-AA----AA----CT-----A--------------------T--TAATGT-----T-----T--------------------T------------CTC-TAC
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1598868                                9150 35 -     11412 CT----TTTAACC-----------T-GA-AA----AA----CA-----G--------------------T--GAATGT-----T-----T--------------------T------------CTC-TCT
i Tarsius_lariang.k141_1598868                           C 0 C 0
s Tarsius_wallacei.k141_780063                               13870 35 +     25099 CT----TTTAACC-----------T-GG-AA----AA----CA-----G--------------------T--GAATGT-----T-----T--------------------T------------CTC-TCT
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422398 47 + 186847797 ca----tttaacc-----------t-ag-aa----aa----ca-----a--------------------t--aaatgt-----t-----tgtttcaaaatgt--------t------------ttg-taT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              102591  6 +    114563 TA----TG--AC----------------------------------------------------------------------------------------------------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 8
s Tolypeutes_matacus.TolMat_scaffold_228639                   1023 31 +      8208 CA----TTTAACC-----------T-GG-AA----AA----CA-----A--------------------T--GAATAT-----C-----T--------------------T------------CT-----
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78512 16 +    610378 ------------------------------------------------------------------------AAATGT-----T-----T------------T-------T------------CTC-TAT
i Tonatia_saurophila.TonSau_scaffold_294                 I 17 C 0
s Trachypithecus_auratus.k141_722599                          5124 47 -     20410 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9318 47 +     15221 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5224 47 +     19930 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       1652 47 -     19997 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            41772 47 -     60166 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9245 47 -     27529 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9181 47 -     18194 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           2920 47 -     21137 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    1620 47 -     10723 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                          776 47 +      9834 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19090 47 +     32220 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933188 47 +   6242583 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2434 47 +     20839 CA----TTTAACC-----------T-AG-AA----AA----CA-----A--------------------T--AAATGT-----T-----TGTTTCAAAATGT--------T------------TTG-TAT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_124071                    191 35 -      2171 CA----CTTAACA-----------T-GG-AA----CA----CA-----C--------------------T--GAACAT-----T-----T--------------------T------------CTC-TAT
i Tragulus_javanicus.TraJav_scaffold_124071              C 0 C 0
s Trichechus_manatus.JH594705.1                            4291899 35 +  10818551 ta----tgtcacC-----------T-GG-AA----AA----TG-----A--------------------T--GGATGT-----T-----T--------------------T------------CTC-TAT
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2149106 35 +   4065304 ta----ttTATCC-----------T-GA-AA----AA----CA-----A--------------------T--GAACGA-----T-----T--------------------T------------CTC-TAT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     2729 35 -     10553 TA----TTTATCC-----------T-GA-AA----AA----CA-----A--------------------T--GAATGA-----T-----T--------------------T------------CTC-TAT
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737198 35 +  33153633 ca----cttAACT-----------T-GA-AA----AA----CT-----C--------------------T--GAGTGT-----T-----T--------------------T------------CTC-TAT
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   51035 25 -     77625 -A----ATTAATC-----------T-GT-AA----GA----CA-----A--------------------C--AAATGT----------------------------------------------------
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 8
s Ursus_maritimus.KK499267.1                               4846440 35 -   5085361 ca----tttcacc-----------T-GG-AA----AA----CA-----A--------------------T--AAATGT-----G-----T--------------------T------------CTC-TAT
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                 5367896 17 -   5488506 ta----tttaACC-----------T-GG-AA----AA----C----------------------------------------------------------------------------------------
i Vicugna_pacos.KN270157.1                               C 0 I 17
s Vulpes_lagopus.VulLag_flattened_line_30954                  6917 35 -     43706 aa----ttttacc-----------t-gg-aA----AG----CC-----A--------------------T--AAATGT-----G-----T--------------------T------------CTC-TGT
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19239 35 -     24430 CA----TTTAACT-----------T-GG-AA----AA----CA-----A--------------------T--GACTCT-----C-----T--------------------T------------CTT-TGT
i Xerus_inauris.XerIna_scaffold_48378                    C 0 I 2
s Zalophus_californianus.ZalCal_flattened_line_63728          1374 33 +      2932 CA----TTTCACC-----------T-GG-AA----AA----CA-----A--------------------T--AAGTGT-----G-----T--------------------T--------------C-TAT
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9534 34 +     63895 ga----TTT-ACC-----------T-TG-AA----AT----CA-----A--------------------T--GGATGT-----T-----T--------------------T------------CTC-TGT
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            10890 35 +     12536 CA----CTTAACT-----------T-GA-AA----AA----CA-----C--------------------T--GAATGT-----T-----T--------------------T------------CTC-TAT
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I

a score=0.000000
s hg38.chrUn_KI270753v1                                        387 18 +     62944 TCAGTCAAAG---GGT------------GAC-T----------G
s Acinonyx_jubatus.LLWD01001279.1                           816523 10 -   1699592 A--------A---GGT------------GAA-T----------G
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     66276 10 +     87051 A-------------GA-----CC-----AGG-C----------A
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506476 10 -  29979442 G--------G---GAT------------GAA-T----------G
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             74763 10 -    347723 G--------G---GAT------------GAA-T----------G
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64570 10 -     89534 G-------------AG-G-----T----AAT-C----------G
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    8860 18 -     52922 CCAATCAAAG---GGT------------GAC-T----------G
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          8785 18 -     28001 CCAATCAAAG---GGT------------GAC-T----------G
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           8911 18 -      9772 CCAATCAAAG---GGT------------GAC-T----------G
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                             68 18 -     12518 CCAATCAAAG---GGT------------GAC-T----------G
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          674797 10 -   2318259 C--------A---GGT------------GAC-T----------G
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      182671 10 +    412891 G--------G---GAT------------GAT-T----------G
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97248 10 -    100397 C--------A---GGT------------GAC-T----------G
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       6812  8 +     20879 G-------------GT------------GAT-T----------G
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 2 C 0
s Arctocebus_calabarensis.k141_288239                        13982 22 +     17124 T--------A---AGTTGAAACCTAGTAGAT-T----------A
i Arctocebus_calabarensis.k141_288239                    I 23 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2023 10 +     43469 A--------G---GAT------------GAT-T----------G
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 16 C 0
s Avahi_laniger.k141_765380                                  48846 10 -     92717 A--------G---GGT------------GAT-T----------G
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              49471 10 +     85213 A--------G---GGT------------GAT-T----------G
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191089 10 +  23207421 C--------A---GAG------------GAT-T----------G
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         1555 10 -     18090 C--------A---GAG------------GAT-T----------G
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    25719 10 +     34529 C--------A---GGT------------GAC-T----------G
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    198759 10 -    288883 c--------A---GGT------------GAC-T----------G
i Bison_bison.KN261452.1                                 I 290 C 0
s Bos_indicus.CM003047.1                                  20271964 10 +  48749331 C--------A---GGT------------GAC-T----------G
i Bos_indicus.CM003047.1                                 I 296 C 0
s Bos_mutus.JH880303.1                                     1124520 10 -   1948126 C--------A---GGT------------GAC-T----------G
i Bos_mutus.JH880303.1                                   I 296 C 0
s Bos_taurus.CM000203.6                                   18082602 10 +  45695690 C--------A---GGT------------GAC-T----------G
i Bos_taurus.CM000203.6                                  I 296 C 0
s Bubalus_bubalis.KI419123.1                               2818092 10 +   4408762 C--------A---GAT------------GAC-T----------G
i Bubalus_bubalis.KI419123.1                             I 295 C 0
s Camelus_bactrianus.KN276810.1                            9998441 10 -  17673402 C--------A---GGC------------GGT-T----------G
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2330905 10 -   7040546 C--------A---GGC------------GGT-T----------G
i Camelus_dromedarius.KN272107.1                         I 17 C 0
s Camelus_ferus.KB017975.1                                  399181 10 -   1652518 C--------A---GGC------------GGT-T----------G
i Camelus_ferus.KB017975.1                               I 17 C 0
s CanFam4.chr16                                           17795329 10 -  60362399 G--------G---GGT------------GAA-T----------G
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181385 10 -    185531 G--------G---GGT------------GAA-T----------G
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9030772 10 -   9314153 G--------G---GGT------------GAA-T----------G
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955036 10 -  59632846 G--------G---GGT------------GAA-T----------G
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496340 10 +  63665305 G--------G---GGT------------GAA-T----------G
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18828915 10 +  46296322 C--------A---GGT------------GGC-T----------G
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18059635 10 -  44709034 C--------A---GGT------------GGC-T----------G
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                     534  5 -     12242 ----------------------------GAG-T----------G
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           140294 10 -    496798 G--------G---AGT------------GAC-T----------G
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2441 10 -     11696 G--------G---GAT------------GAT-T----------G
i Carollia_perspicillata.CarPer_scaffold_92756           I 16 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133216  6 +    179628 G-------------GA------------GTG-------------
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     88253 10 +    217609 C--------A---GTT------------AAT-T----------G
i Catagonus_wagneri.CatWag_scaffold_2839                 I 17 C 0
s Cavia_aperea.AVPZ01000300.1                             18347046  5 -  23392119 ----------------------------GGA-T----------G
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18359306  5 -  23407841 ----------------------------GGA-T----------G
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98181  5 +    143979 ----------------------------GGG-T----------G
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         4212 10 -      8605 G--------G---AGG------------GAC-T----------G
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227415 10 +  27778364 G--------A---GAT------------GAT-T----------G
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2133 10 -      3715 G--------A---GAT------------GAT-T----------G
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4469829 18 +   4669795 CCAATCAAAG---GGT------------GAC-T----------G
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8378 18 -     19203 CCAATCAAAG---GGT------------GAC-T----------G
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           2797 18 +      8260 CCAATCAAAG---GGT------------GAC-T----------G
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3027 18 +     27781 CCAATCAAAG---GGT------------GAC-T----------G
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3173 18 -     20310 CCAATCAAAG---GGT------------GAC-T----------G
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6157 18 +     29689 CCAATCAAAG---GGT------------GAC-T----------G
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             510 18 +      9989 CCAATCAAAG---GGT------------GAC-T----------G
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           8845 18 -     27936 CCAATCAAAG---GGT------------GAC-T----------G
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             8864 18 -     11289 CCAATCAAAG---GGT------------GAC-T----------G
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811240 18 +  39242232 CCAATCAAAG---GGT------------GAC-T----------G
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21216931 18 -  21565898 CCAATCAAAG---GGT------------GAC-T----------G
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34051 18 -     53127 CCAATCAAAG---GGT------------GAC-T----------G
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1343 18 +      7159 CCAATCAAAG---GGT------------GAC-T----------G
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        8856 18 -     27947 CCAATCAAAG---GGT------------GAC-T----------G
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          8832 18 +     17596 CCAATCAAAG---GGT------------GAC-T----------G
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39326 18 -     41420 CCAATCAAAG---GGT------------GAC-T----------G
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4054 13 -      6351 ----------------------------gac-a--attaaaaaa
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 I 309
s Cheirogaleus_major.k141_333249                             16270 10 -     52598 G--------G---GGT------------GAT-T----------G
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           11619 10 +     57038 G--------G---GGT------------GAT-T----------G
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1248080  5 +   2543920 ----------------------------GAG-T----------G
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18422795 18 -  18827391 CCAATCAAAG---GGT------------GAC-T----------G
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9238 18 -     50209 CCAATCAAAG---GGT------------GAC-T----------G
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416243 18 + 135778131 CCAATCAAAG---GGT------------GAC-T----------G
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 14684 18 +     19366 G--------G---GGT------------GAT-AA--AAAAAAAA
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 I 6
s Choloepus_hoffmanni.KN194906.1                            169787 18 +    839153 g--------g---ggt------------gat-a--aaaaaaaaa
i Choloepus_hoffmanni.KN194906.1                         C 0 I 2
s Colobus_angolensis.KN981557.1                            1904766 18 +   2368649 CCAATCAAAG---GGT------------GAC-T----------G
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944384 18 + 200372422 CCAATCAAAG---GGG------------GAC-T----------G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31278 18 +     84244 CCAATCAAAG---GGG------------GAC-T----------G
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545512 10 -  53390261 G--------G---TGT------------GAC-T----------G
i Condylura_cristata.JH655891.1                          I 8 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10074 10 -     20389 G--------G---GAT------------GAT-T----------G
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 46515 10 +     63868 A-------------GC-----CC-----AAG-T----------C
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 5
s Cricetulus_griseus.LT883664.1                           11663507 10 + 224834208 A-------------Gc----------ccaag-t----------a
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_603213               674 12 +      1923 T--------ATGTGAT------------AAC-T-----------
i Crocidura_indochinensis.CroInd_scaffold_603213         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             17532 10 -     87169 A--------A---GGT------------GAA-T----------G
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  34950  5 +     51376 ----------------------------AAA-T----------G
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2425  5 +      5455 ----------------------------GAA-T----------G
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793             814  5 +      3576 ----------------------------GAA-T----------G
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            60214 13 +   2246927 ----------------------------Gac-a--attaaaaaa
i Dasypus_novemcinctus.JH564415.1                        C 0 I 395
s Daubentonia_madagascariensis.ctg71                      12532448 10 -  12879189 G--------G---GGT------------GAT-T----------G
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16810725 10 +  35494412 C--------A---GGC------------GAT-T----------G
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8627472 10 +  20541912 G--------G---GAT------------GAT-C----------G
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  668947 10 +   1390856 G--------A---GAT------------GAT-T----------G
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2022 10 +    198055 G--------A---GAT------------GAT-T----------G
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    33873  5 +     67921 ----------------------------GAG-T----------G
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18895389  9 +  37912305 G-------------GC------------ATgat----------t
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  11598  9 +     14536 G-------------GC------------ATGAT----------T
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31067  5 -     42551 ----------------------------GGA-T----------G
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE759718.1                                   6987 10 +     11740 g--------g---gat------------ggt-t----------g
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       309921 10 +    607251 C--------A---GGT------------GAC-T----------G
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1088551 10 +  10337057 a--------g---ggt------------gac-t----------g
i Elephantulus_edwardii.JH947257.1                       C 0 I 9
s Ellobius_lutescens.LOEQ01008920.1                          12320  8 -    110024 A-------------GT-----C-T----AAG-------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 4
s Ellobius_talpinus.LOJH01123422.1                            3270  8 +      5358 A-------------GT-----C-T----AAG-------------
i Ellobius_talpinus.LOJH01123422.1                       C 0 I 4
s Enhydra_lutris.KZ291758.1                               16325336  7 -  41312741 --------------AC------------AAA-T----------G
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2143329 10 -  14770903 G--------G---GAT------------GAT-T----------G
i Eptesicus_fuscus.JH977646.1                            I 15 C 0
s Equus_asinus.JREZ01000139.1                              1279288 10 +   4378816 G--------G---GGT------------GAT-A----------G
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527109 10 -  39960074 G--------G---GGT------------GAT-A----------G
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29124 10 +    498745 G--------G---GGT------------GAT-A----------G
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3320340  9 -   7059049 G--------AT--GAC------------GAC-------------
i Erinaceus_europaeus.JH835339.1                         C 0 I 2
s Erythrocebus_patas.Contig38                             21199478 18 -  21539334 CCAATCAAAG---GGT------------GAC-T----------G
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10401 10 +    133382 C--------A---GAT------------GAT-T----------G
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24339 10 -     44125 C--------A---GAT------------GAT-T----------G
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.AANG03223880.1                                    77 10 +       572 A--------A---GGT------------GAA-T----------G
i Felis_catus.AANG03223880.1                             n 33 C 0
s Felis_catus_fca126.CM031415.1                           20184952 10 + 205367284 A--------A---GGT------------GAA-T----------G
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_125938                10066 10 -     11347 A--------A---GGT------------GAA-T----------G
i Felis_nigripes.FelNig_flattened_line_125938            C 0 C 0
s Fukomys_damarensis.KN121974.1                             848090  5 +   3816255 ----------------------------AAA-T----------G
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galagoides_demidoff.k141_31856                              2481 10 -      3432 A--------G---GGT------------GAC-T----------G
i Galagoides_demidoff.k141_31856                         I 2 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               24996 10 +     26054 G--------G---TAT------------GAT-T----------G
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     608425 10 -    660261 C--------A---GGT------------GAC-T----------G
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            29920  8 +     49224 G-------------GT------------GAT-T----------G
i Glis_glis.GliGli_scaffold_19807                        I 2 C 0
s Gorilla_beringei.k141_2022027                               1035 18 +      3305 CCAATCAAAG---GGT------------GAC-T----------G
i Gorilla_beringei.k141_2022027                          I 77 I 58
s Gorilla_gorilla.CYUI03002401.1                              5257 18 +      7071 CCAATCAAAG---GGT------------Gac-t----------g
i Gorilla_gorilla.CYUI03002401.1                         I 364 I 58
s Graphiurus_murinus.GraMur_scaffold_10447                   29642  8 +     78134 G-------------GC------------AAC-T----------G
i Graphiurus_murinus.GraMur_scaffold_10447               I 2 C 0
s Helogale_parvula.HelPar_flattened_line_2585               230713 10 +    327341 A--------A---GGT------------GAA-T----------G
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17119 10 +     36099 C--------A---GGT------------GAC-T----------G
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20658981  5 +  22651954 ----------------------------aca-t----------g
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_173205                2912 10 -      3357 A--------G---GAT------------GAC-T----------G
i Heterohyrax_brucei.HetBruBak_scaffold_173205           C 0 I 4
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111580 10 +    128679 C--------A---GGT------------GAT-T----------G
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       107945 10 +   1711038 G--------G---GAT------------GAT-T----------G
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39384 10 +     43066 G--------G---GAT------------GAT-T----------G
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    428812 18 +    630532 TCAGTCAAAG---GGT------------GAC-T----------G
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  32815 10 +     55795 A--------A---GGT------------GAG-T----------G
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19425  5 -    143317 ----------------------------GGA-T----------G
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_307679                               11730 18 -     15490 TCAGTCAAAG---GGT------------GAC-T----------G
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              53735 18 +     67168 TCAGTCAAAG---GGT------------GAC-T----------G
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189537182 18 - 191637585 TCAGTCAAAG---GGT------------GAC-T----------G
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3330280 18 -  11177569 TCAGTCAAAG---GGT------------GAC-T----------G
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80517  5 +    135385 ----------------------------GAA-T----------G
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514138  8 -   7955117 G-------------Gg------------gat-t----------a
i Ictidomys_tridecemlineatus.JH393364.1                  I 2 C 0
s Indri_indri.k141_3655594                                   17703 10 +     31101 A--------G---GGT------------GAT-T----------C
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               21942 10 +     23964 C--------A---GGT------------GAT-T----------G
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8270932 10 -   9596543 G-------------AG-G-----T----AAT-T----------G
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1209 10 -      3359 C--------A---GGT------------GAT-T----------G
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    11466 10 -     42476 G--------G---GAT------------GAT-G----------G
i Lasiurus_borealis.LasBor_scaffold_32767                I 21 C 0
s Lepilemur_ankaranensis.k141_596936                          6326 10 -     23766 G--------G---GGT------------GAT-T----------G
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24273 10 +     45836 G--------G---GGT------------GAT-T----------G
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31183 10 -     32627 G--------G---GGT------------GAT-T----------G
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      22331 10 +     54090 G--------G---GGT------------GAT-T----------G
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.APMU01165359.1                      1514 10 -      1663 G--------G---GGT------------GAA-T----------G
i Leptonychotes_weddellii.APMU01165359.1                 C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     3148 10 -     14121 A--------T---GGT------------GAT-C----------C
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             267023 10 -    662738 C--------A---GGT------------GAT-T----------G
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1430996 18 +   1826925 CCAATCAAAG---GGT------------GAC-T----------G
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             220 22 +     11245 t--------a---agttgaaacctagtagat-t----------a
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999055 22 +   6120653 t--------a---agttaaaacctagtagat-t----------a
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214031 10 -  43346337 A--------G---GAT------------GAT-T----------G
i Loxodonta_africana.GL010049.1                          C 0 I 4
s Lycaon_pictus.CM007581.1                                17951276 10 -  59628241 G--------G---GGT------------GAA-T----------G
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               1184 18 +     40492 CCAATCAAAG---GGT------------GAC-T----------G
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670444 18 +  60120075 CCAATCAAAG---GGT------------GAC-T----------G
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  6942 18 -     26193 CCAATCAAAG---GGT------------GAC-T----------G
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            74733 18 -    114318 CCAATCAAAG---GGT------------GAC-T----------G
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   455 18 -     23192 CCAATCAAAG---GGT------------GAC-T----------G
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                 9904 18 -     29190 CCAATCAAAG---GGT------------GAC-T----------G
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18475 18 +     37952 CCAATCAAAG---GGT------------GAC-T----------G
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833563 18 + 187317192 CCAATCAAAG---GGT------------GAC-T----------G
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452121 18 -  25927173 CCAATCAAAG---GGT------------GAC-T----------G
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74324 18 +     89720 CCAATCAAAG---GGT------------GAC-T----------G
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1321 18 +     20474 CCAATCAAAG---GGT------------GAC-T----------G
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1122 18 -     14993 CCAATCAAAG---GGT------------CAC-T----------G
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  323754 18 -    668171 CCAATCAAAG---GGT------------GAC-T----------G
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15264 18 -     15935 CCAATCAAAG---GGT------------GAC-T----------G
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20060 18 -     45290 CCAATCAAAG---GGT------------GAC-T----------G
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87128 10 +     94391 G--------G---GAT------------GGC-T----------G
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23931614 18 -  24302211 CCAATCAAAG---GGT------------GAC-T----------G
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               345794 18 +    752769 CCAATCAAAG---GGT------------GAC-T----------G
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15151 10 +    737560 G--------G---GTt------------gac-t----------g
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              46541 10 -    317179 G--------G---GTt------------gac-t----------g
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33096981  8 -  40650429 G-------------GG------------GAT-T----------A
i Marmota_marmota.CZRN01000018.1                         I 2 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6391 10 -    207569 G--------G---GAT------------GAT-T----------G
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              5575  7 +     13704 --------------AC------------AAT-T----------G
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 27824 10 +    140813 A-------------GCT----C------AAG-T----------A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12177852 10 -  29670104 a-------------gt----------ccaag-t----------a
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    2610 10 +     10310 C--------A---GGT------------GAT-T----------G
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18282859 10 -  93316391 G--------G---GGT------------GAC-T----------G
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    15014 10 -    145209 A--------G---AGT------------AAC-T----------G
i Microgale_talazaci.MicTal_scaffold_6613                I 12 I 9
s Micronycteris_hirsuta.MicHir_scaffold_52381                12988 10 -     19307 G--------G---GAT------------GAT-T----------G
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11256235 10 -  27267610 A-------------GT-----C-T----AAG-T----------A
i Microtus_ochrogaster.CM001695.1                        C 0 I 5
s Miniopterus_natalensis.LDJU01000034.1                    1848414 10 +   8254450 G--------G---GAT------------GAT-T----------G
i Miniopterus_natalensis.LDJU01000034.1                  I 15 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32283 10 +     64694 G--------G---GAT------------GAT-T----------G
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 15 C 0
s Miopithecus_ogouensis.k141_534055                           3351 18 -     28506 CCAATCAAAG---GGT------------GAC-T----------G
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        61761 10 -     63350 G--------G---GGT------------GAG-T----------G
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      4220 10 -     37649 G--------G---GGT------------AAC-T----------G
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26115 10 -    437263 C--------A---GGC------------GAT-T----------G
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137387 10 -    366855 G--------G---GAT------------GAC-T----------G
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 17 C 0
s Moschus_moschiferus.MosMos_scaffold_61429                  27059 10 -     27816 C--------A---GGT------------GAC-T----------G
i Moschus_moschiferus.MosMos_scaffold_61429              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   23892 10 +     37127 A--------A---GGT------------GAA-T----------G
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           4478 10 +     14753 G--------G---GAT------------GAT-T----------G
i Murina_feae.MurFea_scaffold_85699                      I 15 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              1911  8 +     14296 G-------------GC------------AAC-T----------G
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 2 C 0
s Mustela_putorius.JH418006.1                               297220  7 -  14710649 --------------AC------------AAA-T----------G
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     70695  5 -     80779 ----------------------------AAA-T----------G
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                277586 10 -  10118263 g--------g---GAT------------GAT-T----------G
i Myotis_brandtii.KE162005.1                             I 16 C 0
s Myotis_davidii.KB100139.1                                1585157 10 -   6019432 G--------G---GAT------------GAT-T----------G
i Myotis_davidii.KB100139.1                              I 15 C 0
s Myotis_lucifugus.GL429869.1                              3901374 10 -   4330536 G--------G---GAT------------GAT-T----------G
i Myotis_lucifugus.GL429869.1                            I 15 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        31923 10 +     33610 G--------G---GAT------------GAT-T----------G
i Myotis_myotis.MyoMyo_scaffold_28916                    I 15 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              185649 17 +    196477 G--------G---AGT------------G-C-AATTT--AAGAA
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 I 4
s Nannospalax_galili.KL204047.1                            2025081 10 -   3037898 A-------------GG-G-----T----AAT-T----------A
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                                9364 18 +     21681 CCAATCAAAG---GGT------------GAC-T----------G
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20298752 10 +  31847680 G--------G---GGT------------GAA-T----------G
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865071 10 +   7148211 C--------A---GGT------------GAC-T----------G
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    755951 10 +    783361 G--------G---GAT------------GAT-T----------G
i Noctilio_leporinus.NocLep_scaffold_251                 I 15 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145537 10 -   9404916 G--------G---GGT------------GAA-T----------G
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Ochotona_princeps.JH802162.1                             1355260 10 +   3988456 A--------G---GGT------------GAT-C----------C
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  745986  5 +  11899542 ----------------------------gaa-t----------g
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                              500277 10 -   2017862 G--------T---GGT------------GAA-T----------G
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         144296 10 +    630418 C--------A---GGT------------GAC-T----------G
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          76341 10 -    150152 C--------A---GGT------------GAC-T----------G
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   16566 10 +     28053 A-------------GT-----C-T----AAG-T----------A
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 5
s Onychomys_torridus.OnyTor_scaffold_2986                    74674 10 +    102263 A-------------AC-----CC-----AAG-T----------A
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2780986 10 -  10937097 C--------A---GGT------------GAT-T----------G
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6374 10 -     18566 A--------G---GGT------------GAC-T----------G
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 I 9
s Oryctolagus_cuniculus.CM000791.1                        67144002 10 + 174332312 A--------G---GGT------------AAT-C----------C
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458291 10 -    559221 G--------G---GGT------------GAA-T----------G
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17584650 10 +  44047080 C--------A---GGT------------GAC-T----------G
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173071 10 -    191736 C--------A---GGT------------GAC-T----------G
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    35749 18 +     80009 tCAATCAAAG---GGT------------Gac-t----------g
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             187569738 18 + 189151597 tCAATCAAAG---GGT------------Gac-t----------g
i Pan_troglodytes.CM009242.2                             N 0 N 0
s Panthera_onca.PanOnc_flattened_line_3271                  140167 10 +    230217 A--------A---GGT------------GAA-T----------G
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                251696 10 +  18783137 A--------A---GGT------------GAA-T----------G
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4710137 10 -   8748460 A--------A---GGT------------GAA-T----------G
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1264004 10 -   2937107 C--------A---GGT------------GAC-T----------G
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183436936 18 + 183742232 CCAATCAAAG---GGT------------GAC-T----------G
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                              998 18 +     20448 CCAATCAAAG---GGT------------GAC-T----------G
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20557620 18 +  20919399 CCAATCAAAG---GGT------------GAC-T----------G
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_4051466                                   1198 18 -      1598 CCAATCAAAG---GGT------------GAC-T----------G
i Papio_kindae.k141_4051466                              C 0 C 0
s Papio_papio.k141_802527                                     3030 18 +     27711 CCAATCAAAG---GGT------------GAC-T----------G
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  3019 18 +      9205 CCAATCAAAG---GGT------------GAC-T----------G
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272       957 10 -     78924 A--------A---GGT------------AAA-T----------G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            4202 22 +     13100 T--------A---agttgaaacctagtaggt-t----------g
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             2570 22 +     25941 t--------a---agttgaaacctagtaggt-t----------g
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       24932  9 +     32600 G-------------TT------------ACAAC----------T
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18187460 10 -  18517816 A-------------AC-----CC-----AAG-T----------A
i Peromyscus_maniculatus.KI615324.1                      I 16 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25451  5 -     29689 ----------------------------GAA-T----------G
i Petromus_typicus.PetTyp_scaffold_42190                 I 8 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8033 10 +     63832 C--------A---GGT------------GAC-T----------G
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           37882 18 +     62158 CCAATCAAAG---GGT------------GAC-T----------G
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        32611 18 +     89929 CCAATCAAAG---GGT------------GAC-T----------G
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34027 18 +     51399 CCAATCAAAG---GGT------------GAC-T----------G
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290246 18 -  14605196 CCAATCAAAG---GGT------------GAC-T----------G
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_7723             78944 10 +     79650 G--------G---GAT------------GAT-T----------G
i Pipistrellus_pipistrellus.PipPip_scaffold_7723         I 15 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           33745 10 +     35617 C--------A---GGT------------GAT-T----------G
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189124788 18 + 189387572 TCAGTTAAAG---GGT------------GAC-T----------G
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9564631 18 +   9816681 TCAGTTAAAG---GGT------------GAC-T----------G
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               67520 18 -     81375 CCAATCAAAG---GGT------------GAC-T----------G
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9344 18 +     10147 CCAATCAAAG---GGT------------GAC-T----------G
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9520 10 -     22811 A--------G---GAT------------GAC-T----------G
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 I 4
s Propithecus_coquerelli.NW_012148875.1                     985576 10 +   2598838 A--------G---GGT------------GAT-T----------G
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          23864 10 +     38485 A--------G---GGT------------GAT-T----------G
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                               26 10 +      4256 A--------G---GGT------------GAT-T----------G
i Propithecus_diadema.k141_357118                        N 0 C 0
s Propithecus_edwardsi.k141_1176054                          21384 10 +     35766 A--------G---GGT------------GAT-T----------G
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1630595                          16663 10 +     17239 A--------G---GGT------------GAT-T----------G
i Propithecus_perrieri.k141_1630595                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        23378 10 -     67325 A--------G---GGT------------GAT-T----------G
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_1019028                         13094 10 -     13615 A--------G---GGT------------GAT-T----------G
i Propithecus_verreauxi.k141_1019028                     C 0 C 0
s Psammomys_obesus.NESX01036370.1                             5466  2 -     21651 --------------------------------T----------A
i Psammomys_obesus.NESX01036370.1                        I 1 C 0
s Pteronotus_parnellii.KE909381.1                            10769 10 -     21811 A--------G---GAT------------GAT-T----------G
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36240  7 +     42204 --------------AC------------AAA-T----------G
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973259 10 +  28871421 G--------G---GAt------------ggt-t----------g
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1195 10 -      8028 G--------G---GAT------------ggt-t----------g
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20262672 10 -  38429054 A--------A---GGT------------GAA-T----------G
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                              9348 18 -     91421 CCAATCAAAG---GGT------------GAC-T----------G
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603484 18 +   7812017 CCAATCAAAG---GGT------------GAC-T----------G
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9320 18 -     72585 CCAATCAAAG---GGT------------GAC-T----------G
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4544 10 +     55207 C--------A---GGT------------GAC-T----------G
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr8                                 113027747  9 - 133307652 a-------------GAT----C------AAG-T-----------
i Rattus_norvegicus.chr8                                 I 41 I 6
s Rhinolophus_sinicus.LVEH01000134.1                        366493 10 -   3329780 G--------G---Gat------------gat-t----------a
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                              734 18 -     11128 CCAATCAAAG---GGT------------GAC-T----------G
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230112 18 - 195417433 CCAATCAAAG---GGT------------GAC-T----------G
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7665820 18 +   7961872 CCAATCAAAG---GGT------------GAC-T----------G
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84241 10 -     96226 G--------G---GAT------------GGC-C----------A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3193 10 +      4321 C--------A---GGT------------GAC-T----------G
i Saiga_tatarica.SaiTat_scaffold_373180                  I 17 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    150937 10 -    313613 G--------G---GGT------------GAC-T----------G
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 8 C 0
s Semnopithecus_entellus.k141_11662                          13863 18 -     19888 CCAATCAAAG---GGT------------GAC-T----------G
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21069 18 +     39453 CCAATCAAAG---GGT------------GAC-T----------G
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            1593 18 +     27826 CCAATCAAAG---GGT------------GAC-T----------G
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1113 18 -     19483 CCAATCAAAG---GGT------------GAC-T----------G
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1177 18 +      7198 CCAATCAAAG---GGT------------GAC-T----------G
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9435 18 +     15514 CCAATCAAAG---GGT------------GAC-T----------G
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187253 10 -    191337 G--------A---GAT------------TAA-T----------G
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13646625 12 -  18376816 G--------GTGTGAC------------AGC-A-----------
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1947767  8 -   3870691 g-------------gg------------gat-t----------a
i Spermophilus_dauricus.KZ294078.1                       I 7 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             26775 10 +     97271 G--------G---GAT------------GAA-T----------T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629               6728 10 -    196729 A--------A---GGT------------GAA-T----------G
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   62881756 10 -  69701581 C--------A---GTT------------GAT-C----------C
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1087417 18 -   1523678 TCAGTCAAAG---GGT------------GAC-T----------G
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6382 10 +     41958 G--------G---GAT------------GAT-T----------G
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 15 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69008 18 +    116680 G--------G---AGT------------GAC-AATT--AAAAAA
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 I 4
s Tapirus_indicus.TapInd_scaffold_9301                      114746 10 -    156842 C--------A---GGT------------GAT-A----------G
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383209 10 +    539355 C--------A---GGT------------GAT-A----------G
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1598868                                9185 10 -     11412 G--------G---GGT------------GAC-T----------G
i Tarsius_lariang.k141_1598868                           C 0 C 0
s Tarsius_wallacei.k141_780063                               13905 10 +     25099 G--------G---GGT------------GAC-T----------G
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422445 18 + 186847797 CCAATCAAAG---GGT------------GAC-T----------G
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              102605  5 +    114563 ----------------------------GAG-T----------A
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 8 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   1054 15 +      8208 ----------------------------AAC-AATTTTTAAAAA
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 I 371
s Tonatia_saurophila.TonSau_scaffold_294                     78528 10 +    610378 G--------G---GAT------------GAT-T----------G
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          5171 18 -     20410 CCAATCAAAG---GGT------------GAC-T----------G
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9365 18 +     15221 CCAATCAAAG---GGT------------GAC-T----------G
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5271 18 +     19930 CCAATCAAAG---GGT------------GAC-T----------G
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       1699 18 -     19997 CCAATCAAAG---GGT------------GAC-T----------G
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            41819 18 -     60166 CCAATCAAAG---GGT------------GAC-T----------G
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9292 18 -     27529 CCAATCAAAG---GGT------------GAC-T----------G
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9228 18 -     18194 CCAATCAAAG---AGT------------GAC-T----------G
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           2967 18 -     21137 CCAATCAAAG---GGT------------GAC-T----------G
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    1667 18 -     10723 CCAATCAAAG---GGT------------GAC-T----------G
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                          823 18 +      9834 CCAATCAAAG---GGT------------GAC-T----------G
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19137 18 +     32220 CCAATCAAAG---GGT------------GAC-T----------G
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933235 18 +   6242583 CCAATCAAAG---GGT------------GAC-T----------G
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2481 18 +     20839 CCAATCAAAG---GGT------------GAC-T----------G
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_124071                    226 10 -      2171 G--------A---GGT------------GAC-T----------A
i Tragulus_javanicus.TraJav_scaffold_124071              C 0 C 0
s Trichechus_manatus.JH594705.1                            4291934 10 +  10818551 A--------G---GAT------------GAC-T----------g
i Trichechus_manatus.JH594705.1                          C 0 I 9
s Tupaia_chinensis.KB320699.1                              2149141 10 +   4065304 A--------A---Ggt------------gaa-t----------g
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     2764 10 -     10553 A--------G---GGT------------GAT-T----------G
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737233 10 +  33153633 C--------A---GGT------------GAT-T----------G
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   51068 10 -     77625 A--------A---GGT------------GAT-T----------A
i Uropsilus_gracilis.UroGra_scaffold_12083               I 8 C 0
s Ursus_maritimus.KK499267.1                               4846475 10 -   5085361 G--------G---GAT------------GAA-T----------G
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                 5367930 10 -   5488506 C--------A---GGC------------GGT-T----------G
i Vicugna_pacos.KN270157.1                               I 17 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  6952 10 -     43706 G--------G---GGT------------GAA-T----------G
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19276  8 -     24430 G-------------GT------------GAT-T----------G
i Xerus_inauris.XerIna_scaffold_48378                    I 2 I 6
s Zalophus_californianus.ZalCal_flattened_line_63728          1407 10 +      2932 G--------T---GGT------------GAA-T----------G
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9568 10 +     63895 G-------------AG-G-----T----AAT-T----------G
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            10925 10 +     12536 C--------A---GGT------------GAT-T----------G
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105733362 11135 + 199412804 I
e Nycticebus_bengalensis.LG01                            102569331 4738 - 196305487 I
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I

a score=0.000000
s hg38.chrUn_KI270753v1                                        405 21 +     62944 A-ATAC-AA-A-A-TA----------AAAC-A-AA----T-C-----A
s Acinonyx_jubatus.LLWD01001279.1                           816533 22 -   1699592 A-GTAC-AA-A-A-TA----------GTCC-AAAG----C-T-----A
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     66286 25 +     87051 A-ATAA-A--A-A-TA----------ATCC-ACTA----A-GTGCC-A
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 4
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506486 22 -  29979442 A-GTAC-AA-A-A-TA----------GGCC-AACA----C-T-----A
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             74773 22 -    347723 A-ATAC-AA-A-A-TA----------GGCC-AACA----C-T-----A
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64580 25 -     89534 A-ATTT-A--A-A-TA----------AGTT-ACCA----T-T-ACCTA
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 4
s Allenopithecus_nigroviridis.k141_3361533                    8878 21 -     52922 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          8803 21 -     28001 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           8929 21 -      9772 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                             86 21 -     12518 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          674807 22 -   2318259 G-ATAC-AA-A-A-TA----------AACC-AACA----C-T-----A
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 222
s Anoura_caudifer.AnoCau_scaffold_1412                      182681 22 +    412891 A-ATAC-AA-A-A-TA----------AACC-AGCA----C-T-----A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97258 22 -    100397 G-ATAC-AA-A-A-TA----------AACC-AACA----C-T-----A
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 I 223
s Aplodontia_rufa.AprRuf_scaffold_68852                       6820 13 +     20879 A-ATAC-A--A-A-TA----------AAC-------------------
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 3
s Arctocebus_calabarensis.k141_288239                        14004 15 +     17124 A-CAAC-TA-C-A-GA----------CCCA------------------
i Arctocebus_calabarensis.k141_288239                    C 0 I 4
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2033 22 +     43469 A-ATAC-AA-A-A-TA----------AGCC-AACA----C-T-----A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  48856 22 -     92717 A-ACAC-AA-A-ACAA----------ATCA-A-CA----T-T-----A
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              49481 22 +     85213 A-ACAC-AA-A-ACAA----------ATCA-A-CA----T-T-----A
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191099 22 +  23207421 A-ATAC-AA-A-A-TA----------AACC-AACA----C-T-----A
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 2
s Balaenoptera_bonaerensis.DF707048.1                         1565 22 -     18090 A-ATAC-AA-A-A-TA----------AACC-AACA----C-T-----A
i Balaenoptera_bonaerensis.DF707048.1                    C 0 I 2
s Beatragus_hunteri.BeaHun_scaffold_50177                    25729 22 +     34529 G-ATAC-AA-A-A-TA----------AACC-AACA----C-T-----A
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 222
s Bison_bison.KN261452.1                                    198769 22 -    288883 G-ATAC-AA-A-A-TA----------AGCC-AACA----C-T-----A
i Bison_bison.KN261452.1                                 C 0 I 220
s Bos_indicus.CM003047.1                                  20271974 22 +  48749331 G-ATAC-AA-A-A-TA----------AGCC-AACA----C-T-----A
i Bos_indicus.CM003047.1                                 C 0 I 220
s Bos_mutus.JH880303.1                                     1124530 22 -   1948126 G-ATAC-AA-A-A-TA----------AGCC-AACA----C-T-----A
i Bos_mutus.JH880303.1                                   C 0 I 224
s Bos_taurus.CM000203.6                                   18082612 22 +  45695690 G-ATAC-AA-A-A-TA----------AGCC-AACA----C-T-----A
i Bos_taurus.CM000203.6                                  C 0 I 220
s Bubalus_bubalis.KI419123.1                               2818102 22 +   4408762 G-ATAC-AA-A-A-TA----------AGCC-AACA----C-T-----A
i Bubalus_bubalis.KI419123.1                             C 0 I 220
s Camelus_bactrianus.KN276810.1                            9998451 22 -  17673402 A-ATAC-AA-A-A-TA----------AACC-AACA----C-T-----A
i Camelus_bactrianus.KN276810.1                          C 0 I 3
s Camelus_dromedarius.KN272107.1                           2330915 22 -   7040546 A-ATAC-AA-A-A-TA----------AACC-AACA----C-T-----A
i Camelus_dromedarius.KN272107.1                         C 0 I 3
s Camelus_ferus.KB017975.1                                  399191 22 -   1652518 A-ATAC-AA-A-A-TA----------AACC-AACA----C-T-----A
i Camelus_ferus.KB017975.1                               C 0 I 3
s CanFam4.chr16                                           17795339 22 -  60362399 A-GTAC-AA-A-A-TA----------GGCC-AACA----C-T-----A
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181395 22 -    185531 A-GTAC-AA-A-A-TA----------GGCC-AACA----C-T-----A
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9030782 22 -   9314153 A-GTAC-AA-A-A-TA----------GGCC-AACA----C-T-----A
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955046 22 -  59632846 A-GTAC-AA-A-A-TA----------GGCC-AACA----C-T-----A
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496350 22 +  63665305 A-GTAC-AA-A-A-TA----------GGCC-AACA----C-T-----A
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18828925 22 +  46296322 G-ATAC-AA-A-A-TA----------AACC-AACA----C-T-----A
i Capra_aegagrus.CM003241.1                              C 0 I 222
s Capra_hircus.CM004588.1                                 18059645 22 -  44709034 G-ATAC-AA-A-A-TA----------AACC-AACA----C-T-----A
i Capra_hircus.CM004588.1                                C 0 I 222
s Capromys_pilorides.CapPil_scaffold_65020                     539 21 -     12242 A-ATAC-A--A-A-TA----------AAGC-AATA----C-C-----A
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           140304 22 -    496798 A-ACCC-AA-A-A-CA----------AACCAA-TG----C-T-----A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2451 22 -     11696 A-ATAC-AA-A-A-TA----------AATC-AACA----C-T-----A
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133222 16 +    179628 -------A--A-A-TA----------AACC-AACA----A-A-----A
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 4
s Catagonus_wagneri.CatWag_scaffold_2839                     88263 22 +    217609 A-CTAC-AA-A-A-TA----------AGCC-AACA----C-T-----A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18347051 21 -  23392119 A-ATAT-A--A-A-TA----------AAGC-AACA----C-C-----A
i Cavia_aperea.AVPZ01000300.1                            C 0 I 4
s Cavia_porcellus.DS562891.1                              18359311 21 -  23407841 A-ATAT-A--A-A-TA----------AAGC-AACA----C-C-----A
i Cavia_porcellus.DS562891.1                             C 0 I 4
s Cavia_tschudii.CavTsc_scaffold_8919                        98186 21 +    143979 A-ATAT-A--A-A-TA----------AAGC-AACA----C-C-----A
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 I 4
s Cephalopachus_bancanus.k141_2037105                         4222 22 -      8605 A-ACAC-AA-A-A-CA----------AACCAA-CG----C-T-----A
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227425 22 +  27778364 A-ATAC-AA-A-A-TA----------AACC-AACA----C-T-----A
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2143 22 -      3715 A-ATAC-AA-A-A-TA----------AACC-AACA----C-T-----A
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4469847 21 +   4669795 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8396 21 -     19203 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           2815 21 +      8260 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3045 21 +     27781 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3191 21 -     20310 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6175 21 +     29689 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             528 21 +      9989 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           8863 21 -     27936 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             8882 21 -     11289 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811258 21 +  39242232 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21216949 21 -  21565898 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34069 21 -     53127 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1361 21 +      7159 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        8874 21 -     27947 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          8850 21 +     17596 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39344 21 -     41420 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4376 12 -      6351 --------------aa-----------CAG-AAAT----C-T-----A
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       I 309 C 0
s Cheirogaleus_major.k141_333249                             16280 22 -     52598 A-ACAC-AA-A-ACAA----------ATGA-A-CA----C-T-----A
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           11629 22 +     57038 A-ACAC-AA-A-ACAA----------ATGA-A-CA----C-T-----A
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1248085 21 +   2543920 A-ATAC-A--A-A-TG----------AAGC-AATA----C-C-----A
i Chinchilla_lanigera.JH722012.1                         C 0 I 4
s Chlorocebus_aethiops.ctg25                              18422813 21 -  18827391 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9256 21 -     50209 A-ATAC-AA-A-A-TA----------AACC-A-AA----T-C-----A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416261 21 + 135778131 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 14708 13 +     19366 --------------AA----------AAAA-AAAA----C-T-----T
i Choloepus_didactylus.ChoDid_scaffold_45914             I 6 C 0
s Choloepus_hoffmanni.KN194906.1                            169807 10 +    839153 ---------------------------aaa-aaaa----c-t-----t
i Choloepus_hoffmanni.KN194906.1                         I 2 C 0
s Colobus_angolensis.KN981557.1                            1904784 21 +   2368649 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944402 21 + 200372422 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31296 21 +     84244 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545522 14 -  53390261 A-ATAC-AC-A-A-TA----------AAC-------------------
i Condylura_cristata.JH655891.1                          C 0 I 11
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10084 22 -     20389 A-GTAC-AA-A-C-TA----------AACC-AACA----C-T-----A
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 3
s Cricetomys_gambianus.CriGam_scaffold_18520                 46530 19 +     63868 ----------A-A-TA----------AACC-ACTA----A-ACGCT-A
i Cricetomys_gambianus.CriGam_scaffold_18520             I 5 I 4
s Cricetulus_griseus.LT883664.1                           11663517 25 + 224834208 a-ataaaa--a-a-ta----------agc--tatT----A-ATGCT-A
i Cricetulus_griseus.LT883664.1                          C 0 I 4
s Crocidura_indochinensis.CroInd_scaffold_603213               686 10 +      1923 -----C-AA-A-A-TC----------AGC-------------------
i Crocidura_indochinensis.CroInd_scaffold_603213         C 0 I 4
s Cryptoprocta_ferox.CryFer_flattened_line_16129             17542 22 -     87169 A-GTAC-AA-A-A-TA----------CTCC-AACA----C-T-----A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  34955 21 +     51376 A-ATAC-A--A-A-GA----------CAGC-AATA----C-C-----A
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 4
s Cuniculus_paca.CunPac_flattened_line_231100                 2430 21 +      5455 A-ATAC-A--A-A-TA----------AAGT-AATA----C-C-----A
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 I 4
s Dasyprocta_punctata.DasPun_flattened_line_206793             819 21 +      3576 A-ATAC-A--A-A-TA----------AAAC-AATA----C-C-----A
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 I 4
s Dasypus_novemcinctus.JH564415.1                            60622 13 +   2246927 --------------aa----------aaaa-aaaa----c-t-----a
i Dasypus_novemcinctus.JH564415.1                        I 395 C 0
s Daubentonia_madagascariensis.ctg71                      12532458 21 -  12879189 A-ACAC-AA-A-A-GA----------ATCA-A-CA----C-T-----A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16810735 22 +  35494412 A-ATAC-AA-A-A-TA----------AACC-AACA----C-T-----A
i Delphinapterus_leucas.KZ290073.1                       C 0 I 2
s Desmodus_rotundus.KZ672289.1                             8627482 22 +  20541912 a-acac-aa-a-a-ta----------aacc-aaca----c-t-----a
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  668957 22 +   1390856 A-ATAC-AA-A-A-TA----------AGCC-AACA----C-T-----A
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2032 22 +    198055 A-ATAC-AA-A-A-TA----------AACC-AACA----C-T-----A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    33878 21 +     67921 A-ATAG-A--A-G-TA----------AAGC-ATTA----C-C-----A
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 4
s Dipodomys_ordii.KN672350.1                              18895398 22 +  37912305 a-atat-a--a-a-ta----------aatc-aacA----CTA-----A
i Dipodomys_ordii.KN672350.1                             C 0 I 4
s Dipodomys_stephensi.DipSte_scaffold_75855                  11607 22 +     14536 A-ATAT-A--A-A-TA----------AATC-AACA----CTA-----A
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 I 4
s Dolichotis_patagonum.DolPat_scaffold_30833                 31072 21 -     42551 A-ATAC-A--A-A-TG----------AAGC-AACA----C-C-----A
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 I 4
s Eidolon_helvum.KE759718.1                                   6997 21 +     11740 a-atat-aa-a-a-ta----------aac--aaca----c-t-----T
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       309931 22 +    607251 G-ATAC-AA-A-A-TA----------AACC-AACA----C-T-----A
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 220
s Elephantulus_edwardii.JH947257.1                         1088570 13 +  10337057 --------------ta----------aagc-aaaa----c-t-----a
i Elephantulus_edwardii.JH947257.1                       I 9 C 0
s Ellobius_lutescens.LOEQ01008920.1                          12332 16 -    110024 ---------------A----------AACC-ATTA----A-ATGCC-A
i Ellobius_lutescens.LOEQ01008920.1                      I 4 I 4
s Ellobius_talpinus.LOJH01123422.1                            3282 16 +      5358 ---------------A----------AACC-ATTA----A-ATGCC-A
i Ellobius_talpinus.LOJH01123422.1                       I 4 I 4
s Enhydra_lutris.KZ291758.1                               16325343 22 -  41312741 A-GTAC-AA-A-A-TA----------GGCC-AACA----C-T-----A
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2143339 22 -  14770903 A-ATAC-AA-A-A-TA----------AGCC-AGCA----C-T-----A
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279298 22 +   4378816 A-ACAT-AC-A-G-TA----------AATC-AACA----C-T-----G
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527119 22 -  39960074 A-ACAT-AC-A-G-TA----------AATC-AACA----C-T-----G
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29134 22 +    498745 A-ACAT-AC-A-G-TA----------AATC-AACA----C-T-----G
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3320351 18 -   7059049 A-ATAC-AA-A-A-TAA------TCCAAA-------------------
i Erinaceus_europaeus.JH835339.1                         I 2 I 4
s Erythrocebus_patas.Contig38                             21199496 21 -  21539334 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10411 22 +    133382 A-ATAC-AA-A-A-TA----------AACC-AAAA----C-T-----A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 2
s Eubalaena_japonica.EubJap_flattened_line_31514             24349 22 -     44125 A-ATAC-AA-A-A-TA----------AACC-AACA----C-T-----A
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 I 2
s Felis_catus.AANG03223880.1                                    87 23 +       572 AGGTAC-AA-A-A-TA----------GTCC-AAAG----C-T-----A
i Felis_catus.AANG03223880.1                             C 0 I 247
s Felis_catus_fca126.CM031415.1                           20184962 23 + 205367284 AGGTAT-AA-A-A-TA----------GTCC-AAAG----C-T-----A
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_125938                10076 23 -     11347 AGGTAC-AA-A-A-TA----------GTCC-AAAG----C-T-----A
i Felis_nigripes.FelNig_flattened_line_125938            C 0 C 0
s Fukomys_damarensis.KN121974.1                             848095 21 +   3816255 A-ACAT-A--A-G-TA----------AGGC-AATA----C-T-----A
i Fukomys_damarensis.KN121974.1                          C 0 I 4
s Galagoides_demidoff.k141_31856                              2491 22 -      3432 A-ACAC-AA-A-ATAA----------ATCA-A-CC----C-T-----A
i Galagoides_demidoff.k141_31856                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25006 22 +     26054 A-ATAC-AA-A-G-TA----------AGCC-AACA----C-T-----A
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     608435 22 -    660261 G-ATAC-AA-A-A-TA----------AACC-AACA----C-T-----A
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 I 234
s Glis_glis.GliGli_scaffold_19807                            29928 21 +     49224 A-ACCC-A--A-A-TA----------AACC-AAAA----C-A-----A
i Glis_glis.GliGli_scaffold_19807                        C 0 I 3
s Gorilla_beringei.k141_3596273                               9843 21 -     32273 A-ATAC-AA-A-A-TA----------AAAC-A-AA----T-C-----A
i Gorilla_beringei.k141_3596273                          I 18 C 0
s Gorilla_gorilla.LT578341.1                             186331996 21 + 186649187 a-atac-aa-a-a-ta----------aaac-a-aa----t-c-----a
i Gorilla_gorilla.LT578341.1                             I 18 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   29650 21 +     78134 A-ACAC-A--A-A-TA----------AAAC-AACA----C-T-----A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 3
s Helogale_parvula.HelPar_flattened_line_2585               230723 22 +    327341 A-GTAT-AA-A-A-TC----------CTCC-AACA----C-T-----A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17129 22 +     36099 G-ATAC-AA-A-G-TA----------AACC-AACA----C-T-----A
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 I 222
s Heterocephalus_glaber.JH602082.1                        20658986 21 +  22651954 a-atat-a--a-a-ta----------aagc-aatt----c-T-----A
i Heterocephalus_glaber.JH602082.1                       C 0 I 4
s Heterohyrax_brucei.HetBruBak_scaffold_173205                2926 13 -      3357 --------------TA----------AAAC-AAAA----C-T-----A
i Heterohyrax_brucei.HetBruBak_scaffold_173205           I 4 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111590 22 +    128679 A-ATAC-AA-A-A-TA----------AACC-AACA----C-T-----A
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 I 2
s Hipposideros_armiger.JXIK01000431.1                       107955 22 +   1711038 A-ATAC-AA-A-A-TA----------AACC-GACA----C-G-----A
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39394 22 +     43066 A-ACAC-AA-A-A-TA----------AACC-AACG----C-T-----A
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    428830 21 +    630532 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  32825 22 +     55795 A-GTAC-AA-A-A-TA----------CTCC-AACA----C-T-----A
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19430 21 -    143317 A-ATAC-A--A-A-TA----------AAGC-AACA----C-C-----A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 4
s Hylobates_agilis.k141_307679                               11748 21 -     15490 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              53753 21 +     67168 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189537200 21 - 191637585 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3330298 21 -  11177569 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80522 21 +    135385 A-ACAC-A--A-A-TG----------AAGC-AATA----C-T-----A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 4
s Ictidomys_tridecemlineatus.JH393364.1                    7514146 21 -   7955117 a-atac-a--a-a-ta----------aacc-aACA----C-T-----C
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 3
s Indri_indri.k141_3655594                                   17713 22 +     31101 A-ACAC-AA-A-ACAA----------ATCA-A-CA----C-T-----A
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               21952 22 +     23964 A-ATAC-AA-A-A-TA----------AACC-AACA----C-T-----A
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 I 2
s Jaculus_jaculus.JH725527.1                               8270942 25 -   9596543 A-ATTT-A--A-A-TA----------AGCT-ACAG----T-T-ACCTA
i Jaculus_jaculus.JH725527.1                             C 0 I 4
s Kogia_breviceps.KogBre_flattened_line_192630                1219 22 -      3359 A-ATAC-AA-A-A-TA----------AACC-AACA----C-T-----A
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 I 2
s Lasiurus_borealis.LasBor_scaffold_32767                    11476 22 -     42476 A-ATAC-AA-A-A-TA----------AACC-AACG----C-T-----A
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6336 22 -     23766 A-ACAC-AA-A-ACAA----------ATCA-A-CA----C-T-----A
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24283 22 +     45836 A-ACAC-AA-A-ACAA----------ATCA-A-CA----C-T-----A
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31193 22 -     32627 A-ACAC-AA-A-ACAA----------ATCA-A-CA----C-T-----A
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      22341 22 +     54090 A-ACAC-AA-A-ACAA----------ATCA-A-CA----C-T-----A
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.APMU01165359.1                      1524 22 -      1663 A-GTAC-AA-A-A-TA----------GGCC-AACA----C-T-----A
i Leptonychotes_weddellii.APMU01165359.1                 C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     3158 22 -     14121 A-ATAC-AA-A-A-TA----------AACC-GACT----C-T-----A
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 3
s Lipotes_vexillifer.KE559953.1                             267033 22 -    662738 A-ATAC-AA-A-A-TA----------AACC-AAGA----C-T-----A
i Lipotes_vexillifer.KE559953.1                          C 0 I 2
s Lophocebus_aterrimus.ctg367                              1431014 21 +   1826925 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             242 15 +     11245 a-caac-ta-c-a-ga----------ccca------------------
i Loris_lydekkerianus.k141_2539221                       C 0 I 4
s Loris_tardigradus.ctg83                                   999077 15 +   6120653 a-caac-ta-c-a-ga----------ccca------------------
i Loris_tardigradus.ctg83                                C 0 I 4
s Loxodonta_africana.GL010049.1                            4214045 13 -  43346337 --------------TA----------AAAT-AAAA----C-T-----A
i Loxodonta_africana.GL010049.1                          I 4 C 0
s Lycaon_pictus.CM007581.1                                17951286 22 -  59628241 A-GTAC-AA-A-A-TA----------GGCC-AACA----C-T-----A
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               1202 21 +     40492 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----G
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670462 21 +  60120075 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----G
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  6960 21 -     26193 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----G
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            74751 21 -    114318 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----G
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   473 21 -     23192 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----G
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                 9922 21 -     29190 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----G
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18493 21 +     37952 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----G
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833581 21 + 187317192 a-atac-aa-a-a-ca----------aacc-a-aa----c-c-----g
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452139 21 -  25927173 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----G
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74342 21 +     89720 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----G
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1339 21 +     20474 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----G
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1140 21 -     14993 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----G
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  323772 21 -    668171 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----G
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15282 21 -     15935 A-TTAC-AA-A-A-TA----------AACC-A-AA----C-C-----G
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20078 21 -     45290 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----G
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87138 22 +     94391 A-ATAT-AA-A-A-TA----------AACC-AAAA----C-T-----T
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23931632 21 -  24302211 A-ATAC-AA-G-A-CA----------AACC-A-AA----C-C-----A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               345812 21 +    752769 A-ATAC-AA-G-A-TA----------AACC-A-AA----C-C-----A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15161 23 +    737560 a-ataa-aa-aaa-tg----------aatc-aaca----T-T-----A
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              46551 23 -    317179 a-ataa-aa-aaa-tg----------aatc-aaca----t-T-----A
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33096989 21 -  40650429 A-ATAC-A--A-T-TA----------AACC-AACA----C-T-----C
i Marmota_marmota.CZRN01000018.1                         C 0 I 3
s Megaderma_lyra.MegLyr_scaffold_4542                         6401 22 -    207569 A-GTAC-AA-A-A-TA----------AACC-AACA----C-T-----A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              5582 22 +     13704 A-GTAT-AA-A-A-TA----------AGCC-AACA----C-T-----A
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 27834 25 +    140813 A-AGAA-A--A-G-CA----------GGCC-ACTA----A-AGGTT-A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 4
s Mesocricetus_auratus.KB708134.1                         12177862 27 -  29670104 a-ataaaa-aa-a-ta----------aacc-ttta----a-atgTT-A
i Mesocricetus_auratus.KB708134.1                        C 0 I 4
s Mesoplodon_bidens.MesBid_scaffold_108144                    2620 22 +     10310 A-ATAC-AA-A-A-TA----------AACC-AACA----C-T-----A
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 I 2
s Microcebus_murinus.CM007674.1                           18282869 21 -  93316391 A-ACA--GA-A-ACAA----------ATCA-A-AG----C-C-----A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    15033 13 -    145209 --------------TA----------AAAC-AAAA----C-T-----A
i Microgale_talazaci.MicTal_scaffold_6613                I 9 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                12998 22 -     19307 A-ATAC-AA-A-A-GA----------AACC-AACA----C-T-----A
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11256250 16 -  27267610 ---------------A----------AGGC-ATTA----A-ATGcc-a
i Microtus_ochrogaster.CM001695.1                        I 5 I 4
s Miniopterus_natalensis.LDJU01000034.1                    1848424 22 +   8254450 A-ATGC-AA-A-A-TA----------AACC-AGCA----C-T-----A
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32293 22 +     64694 A-ATGC-AA-A-A-TA----------AACC-AGCA----C-T-----A
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3369 21 -     28506 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        61771 22 -     63350 A-GTAC-AA-A-A-TA----------GGCC-AACA----C-T-----A
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      4230 21 -     37649 A-ACA--GA-A-ACAA----------ATCA-A-CG----C-C-----A
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26125 22 -    437263 A-ATAC-AA-A-A-TA----------AACC-AACA----C-T-----A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 2
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137397 22 -    366855 A-ATAC-AA-A-A-TA----------AACC-AGTA----C-T-----T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_61429                  27069 22 -     27816 G-ATAC-AA-A-A-TT----------AACC-AACA----C-T-----A
i Moschus_moschiferus.MosMos_scaffold_61429              C 0 I 222
s Mungos_mungo.MunMun_flattened_line_23663                   23902 22 +     37127 A-GTAC-AA-A-A-TA----------CTCC-AACA----C-C-----A
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           4488 22 +     14753 A-ATAT-AA-A-A-TA----------AGCC-AACA----C-T-----A
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              1919 21 +     14296 A-ACAC-A--A-A-TA----------AACC-AAAA----C-C-----A
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 3
s Mustela_putorius.JH418006.1                               297227 22 -  14710649 A-GTAC-AA-A-A-TA----------GGCC-AACA----C-T-----A
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     70700 21 -     80779 A-ATAC-A--A-A-TA----------AAGC-AATA----C-C-----A
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 I 3
s Myotis_brandtii.KE162005.1                                277596 22 -  10118263 A-GTAC-AA-A-A-TA----------AGCC-AACA----C-T-----A
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585167 22 -   6019432 A-ATAC-AA-A-A-TA----------AGCC-AACA----C-T-----A
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3901384 22 -   4330536 A-GTAC-AA-A-A-TA----------AGCC-AACA----C-T-----A
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        31933 22 +     33610 A-GTAC-AA-A-A-TA----------AGCC-AACA----C-T-----A
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              185670 13 +    196477 --------------AA----------GAAA-AAAC----T-T-----A
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 4 C 0
s Nannospalax_galili.KL204047.1                            2025091 25 -   3037898 A-ATGC-A--A-A-TA----------AGTC-AATG----G-ATGCT-G
i Nannospalax_galili.KL204047.1                          C 0 I 4
s Nasalis_larvatus.k141_413338                                9382 21 +     21681 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20298762 22 +  31847680 A-GTAC-AA-A-A-TA----------GGCC-AACA----C-T-----A
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865081 22 +   7148211 A-ATAC-AA-A-A-TA----------AACC-AACA----C-T-----A
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 2
s Noctilio_leporinus.NocLep_scaffold_251                    755961 22 +    783361 A-ATAC-AA-A-A-TA----------AACC-AGCA----C-T-----A
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145547 22 -   9404916 A-GTAC-AA-A-A-TA----------GGCC-AACA----C-T-----A
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Ochotona_princeps.JH802162.1                             1355270 22 +   3988456 A-ATGC-AA-A-A-TA----------TACC-AATA----C-A-----A
i Ochotona_princeps.JH802162.1                           C 0 I 2
s Octodon_degus.JH651603.1                                  745991 21 +  11899542 a-atac-a--a-a-ta----------aaac-aata----c-c-----a
i Octodon_degus.JH651603.1                               C 0 I 4
s Odobenus_rosmarus.KB229312.1                              500287 22 -   2017862 A-GTAC-AA-A-A-TA----------GGCC-AACA----C-T-----A
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         144306 22 +    630418 G-ATAC-AA-A-A-TA----------AACC-AACA----C-T-----A
i Odocoileus_virginianus.KZ100018.1                      C 0 I 218
s Okapia_johnstoni.LVCL01S0005463.1                          76351 22 -    150152 G-ATAC-AA-A-A-TA----------AACC-AACA----C-T-----A
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 234
s Ondatra_zibethicus.OndZib_scaffold_46174                   16581 25 +     28053 ---------------AAAAAAAATA-AGCC-ATTA----A-ATGCC-A
i Ondatra_zibethicus.OndZib_scaffold_46174               I 5 I 4
s Onychomys_torridus.OnyTor_scaffold_2986                    74684 25 +    102263 A-ATAA-A--G-A-TA----------AGCC-ATCA----A-ATGCC-A
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 4
s Orcinus_orca.KB316932.1                                  2780996 22 -  10937097 A-ATAC-AA-A-A-TA----------AACC-AACA----C-T-----A
i Orcinus_orca.KB316932.1                                C 0 I 2
s Orycteropus_afer.OryAfe_flattened_line_144387               6393 13 -     18566 --------------TA----------AAAC-AAAA----C-T-----A
i Orycteropus_afer.OryAfe_flattened_line_144387          I 9 C 0
s Oryctolagus_cuniculus.CM000791.1                        67144012 22 + 174332312 A-ATAC-AA-A-A-TA----------AACC-AACT----G-T-----A
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 3
s Otocyon_megalotis.JAEUCK010005147.1                       458301 22 -    559221 A-GTAC-AA-A-A-TA----------GGCC-AACA----C-T-----A
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17584660 22 +  44047080 G-ATAC-AA-A-G-TA----------AACC-AACA----C-T-----A
i Ovis_aries.CM001607.2                                  C 0 I 222
s Ovis_canadensis.OviCan_scaffold_2572                      173081 22 -    191736 G-ATAC-AA-A-G-TA----------AACC-AACA----C-T-----A
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 I 222
s Pan_paniscus.KQ411613.1                                    35767 21 +     80009 a-atac-aa-a-a-ta----------aaac-a-aa----t-c-----a
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189136717 21 + 189151597 a-atac-aa-a-a-ta----------aaac-a-aa----t-c-----a
i Pan_troglodytes.CM009242.2                             N 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  140177 22 +    230217 A-ATAC-AA-A-A-TA----------GTCC-AAAG----C-T-----A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                251706 22 +  18783137 A-ATAC-AA-A-A-TA----------GTCC-AAAG----C-T-----A
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4710147 22 -   8748460 A-ATAC-AA-A-A-TA----------Gtcc-aaag----c-a-----a
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1264014 22 -   2937107 G-ATAC-AA-A-A-TA----------AACC-AACA----C-T-----A
i Pantholops_hodgsonii.KE114653.1                        C 0 I 222
s Papio_anubis.CM001495.2                                183436954 21 + 183742232 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1016 21 +     20448 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20557638 21 +  20919399 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_4051466                                   1216 21 -      1598 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Papio_kindae.k141_4051466                              C 0 C 0
s Papio_papio.k141_802527                                     3048 21 +     27711 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  3037 21 +      9205 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272       967 22 -     78924 A-GTAC-AA-A-A-TA----------GTCC-AACA----C-T-----A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            4224 15 +     13100 a-caac-ta-c-a-ga----------tcta------------------
i Perodicticus_ibeanus.k141_855320                       C 0 I 4
s Perodicticus_potto.k141_1092580                             2592 15 +     25941 a-caac-ta-c-a-ga----------ccca------------------
i Perodicticus_potto.k141_1092580                        C 0 I 4
s Perognathus_longimembris.PerPac_flattened_line_34437       24941 22 +     32600 A-CTAT-A--A-A-TA----------AATC-AACA----CTA-----A
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 I 4
s Peromyscus_maniculatus.KI615324.1                       18187470 25 -  18517816 A-ATAA-A--G-A-TA----------AGCC-ATCA----A-ATGCC-A
i Peromyscus_maniculatus.KI615324.1                      C 0 I 4
s Petromus_typicus.PetTyp_scaffold_42190                     25456  9 -     29689 A-ATAT-A--A-A-T---------------------------------
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 I 11
s Phocoena_phocoena.PhoPho_flattened_line_24159               8043 22 +     63832 A-ATAC-AA-A-A-TA----------AACC-AACA----C-T-----A
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 3
s Piliocolobus_badius.k141_1234363                           37900 21 +     62158 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        32629 21 +     89929 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34045 21 +     51399 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290264 21 -  14605196 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_7723             78954 22 +     79650 A-ATAC-AA-A-C-TA----------AGCC-AGCA----C-T-----A
i Pipistrellus_pipistrellus.PipPip_scaffold_7723         C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           33755 22 +     35617 A-ATAC-AA-A-A-TA----------AACC-AACA----C-T-----A
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 I 2
s Pongo_abelii.CM009266.2                                189124806 21 + 189387572 A-GTAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9564649 21 +   9816681 A-GTAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               67538 21 -     81375 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9362 21 +     10147 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9534 13 -     22811 --------------TA----------AAAC-AAAA----C-T-----A
i Procavia_capensis.ProCapCap_scaffold_85530             I 4 C 0
s Propithecus_coquerelli.NW_012148875.1                     985586 22 +   2598838 A-ACAC-AA-A-ACAA----------ATCA-A-CA----C-T-----A
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s Propithecus_coronatus.k141_347390                          23874 22 +     38485 A-ACAC-AA-A-ACAA----------ATCA-A-CA----C-T-----A
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                               36 22 +      4256 A-ACAC-AA-A-ACAA----------ATCA-A-CA----C-T-----A
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          21394 22 +     35766 A-ACAC-AA-A-ACAA----------ATCA-A-CA----C-T-----A
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1630595                          16673 22 +     17239 A-ACAC-AA-A-ACAA----------ATCA-A-CA----C-T-----A
i Propithecus_perrieri.k141_1630595                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        23388 22 -     67325 A-ACAC-AA-A-ACAA----------ATCA-A-CA----C-T-----A
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_1019028                         13104 22 -     13615 A-ACAC-AA-A-ACAA----------ATCA-A-CA----C-T-----A
i Propithecus_verreauxi.k141_1019028                     C 0 C 0
s Psammomys_obesus.NESX01036370.1                             5468 25 -     21651 A-AGAA-A--A-G-CA----------GGCC-ACTA----A-AGGTT-A
i Psammomys_obesus.NESX01036370.1                        C 0 I 4
s Pteronotus_parnellii.KE909381.1                            10779 22 -     21811 A-GTGC-AA-A-A-TA----------AACC-AACA----C-T-----A
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36247 22 +     42204 A-ATAC-AA-A-A-TA----------GGCC-AACA----C-T-----A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973269 22 +  28871421 a-atat-aa-a-a-ta----------aacc-aacA----C-T-----T
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1205 22 -      8028 a-atat-aa-a-a-ta----------aacc-aacA----C-T-----T
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20262682 22 -  38429054 A-GTAC-AA-A-A-TA----------GTCC-AAAG----C-T-----A
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                              9366 21 -     91421 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603502 21 +   7812017 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9338 21 -     72585 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4554 22 +     55207 G-ATAC-AA-A-A-TA----------AACC-AACA----C-T-----A
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 218
s Rattus_norvegicus.chr8                                 113027762 15 - 133307652 --------------------------TGCC-ACTA----A-GT-CCTA
i Rattus_norvegicus.chr8                                 I 6 I 4
s Rhinolophus_sinicus.LVEH01000134.1                        366503 22 -   3329780 a-atac-aa-a-a-ta----------aacc-aaca----c-t-----A
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                              752 21 -     11128 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230130 21 - 195417433 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7665838 21 +   7961872 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84251 22 -     96226 A-ATAT-AA-A-A-TA----------AACG-AACA----C-T-----T
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3203 22 +      4321 G-ATAC-AA-A-A-TA----------AACC-AACA----C-T-----A
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 I 222
s Scalopus_aquaticus.ScaAqu_scaffold_662                    150947 14 -    313613 A-AGAC-AA-A-G-TA----------AAC-------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 8
s Semnopithecus_entellus.k141_11662                          13881 21 -     19888 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21087 21 +     39453 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            1611 21 +     27826 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1131 21 -     19483 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1195 21 +      7198 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9453 21 +     15514 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187263 14 -    191337 A-GTAC-CA-A-A-AA----------AAC-------------------
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 I 4
s Sorex_araneus.JH798187.1                                13646637 10 -  18376816 -----T-AA-A-G-TA----------AAC-------------------
i Sorex_araneus.JH798187.1                               C 0 I 4
s Spermophilus_dauricus.KZ294078.1                         1947775 21 -   3870691 a-atac-a--a-a-ta----------aacc-aACA----C-T-----C
i Spermophilus_dauricus.KZ294078.1                       C 0 I 3
s Spilogale_gracilis.SpiGra_flattened_line_13525             26785 22 +     97271 A-GTAC-AA-A-A-CA----------GGCC-AATA----C-T-----A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629               6738 22 -    196729 A-GTAC-AA-A-A-TA----------CTCC-AACA----C-T-----A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   62881766 22 -  69701581 A-ATAC-AA-A-A-TA----------AGCC-AACA----C-T-----A
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1087435 21 -   1523678 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6392 22 +     41958 A-ATAC-AA-A-A-TA----------AACC-AACA----C-T-----A
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69030 13 +    116680 --------------AA----------GAAA-AAAC----C-T-----A
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 4 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      114756 22 -    156842 A-ATAC-AC-A-A-TA----------AACC-AATG----C-C-----A
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383219 22 +    539355 A-ATAC-AC-A-A-TA----------AACC-AATG----C-T-----C
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1598868                                9195 22 -     11412 A-ATAC-AA-G-A-TA----------AACCAA-TG----C-T-----A
i Tarsius_lariang.k141_1598868                           C 0 C 0
s Tarsius_wallacei.k141_780063                               13915 22 +     25099 A-ATAC-AA-A-A-TA----------AACCAA-TG----C-T-----A
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422463 21 + 186847797 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              102610  9 +    114563 A-ATAA-A--A-A-G---------------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 11
s Tolypeutes_matacus.TolMat_scaffold_228639                   1440 15 +      8208 --------------aa-------ga-AAAA-AAAA----C-T-----A
i Tolypeutes_matacus.TolMat_scaffold_228639              I 371 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78538 22 +    610378 A-ACAC-AA-A-A-TA----------AACC-AACA----T-G-----A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          5189 21 -     20410 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9383 21 +     15221 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5289 21 +     19930 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       1717 21 -     19997 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            41837 21 -     60166 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9310 21 -     27529 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9246 21 -     18194 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           2985 21 -     21137 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    1685 21 -     10723 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                          841 21 +      9834 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19155 21 +     32220 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933253 21 +   6242583 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2499 21 +     20839 A-ATAC-AA-A-A-TA----------AACC-A-AA----C-C-----A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_124071                    236 20 -      2171 A---AC-AA-A-A-TA----------AACC-AATA----T-G-----A
i Tragulus_javanicus.TraJav_scaffold_124071              C 0 I 230
s Trichechus_manatus.JH594705.1                            4291953 13 +  10818551 --------------ga----------aaac-aaaa----c-t-----a
i Trichechus_manatus.JH594705.1                          I 9 C 0
s Tupaia_chinensis.KB320699.1                              2149151 18 +   4065304 a-atac-aa-a-a-ta----------aact-aAC--------------
i Tupaia_chinensis.KB320699.1                            C 0 I 2
s Tupaia_tana.TupTan_flattened_line_97126                     2774 18 -     10553 A-ATAC-AA-A-A-TA----------AACT-AAC--------------
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 2
s Tursiops_truncatus.MRVK01000835.1                       15737243 22 +  33153633 A-ATAC-AA-A-A-TA----------AACC-AACA----C-T-----A
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 2
s Uropsilus_gracilis.UroGra_scaffold_12083                   51078 14 -     77625 A-ATAC-AA-A-A-TA----------CAC-------------------
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 8
s Ursus_maritimus.KK499267.1                               4846485 22 -   5085361 A-GTAC-AA-A-A-TA----------GGTC-AACA----C-T-----A
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                 5367940 22 -   5488506 A-ATAC-AA-A-A-TA----------AACC-AACA----C-T-----A
i Vicugna_pacos.KN270157.1                               C 0 I 3
s Vulpes_lagopus.VulLag_flattened_line_30954                  6962 22 -     43706 A-GTAC-AA-A-A-TA----------GGCC-AATA----C-T-----A
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19290 11 -     24430 --------------------------AACC-AACA----C-T-----A
i Xerus_inauris.XerIna_scaffold_48378                    I 6 I 3
s Zalophus_californianus.ZalCal_flattened_line_63728          1417 22 +      2932 A-GTAC-AA-A-A-TA----------GGCC-AACA----C-T-----A
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9578 25 +     63895 A-ATAT-A--A-A-TA----------AGGC-AACA----T-TAGCT-A
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 4
s Ziphius_cavirostris.ZipCav_flattened_line_71469            10935 22 +     12536 A-ATAC-AA-A-A-TA----------AACC-AACA----C-T-----A
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 I 2
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105733362 11135 + 199412804 I
e Nycticebus_bengalensis.LG01                            102569331 4738 - 196305487 I
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I

a score=0.000000
s hg38.chrUn_KI270753v1                                        426 12 +     62944 AG-GAG-AATT--TTC
s Acinonyx_jubatus.LLWD01001279.1                           816555 12 -   1699592 AG-AAA-AAAC--TTC
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     66315  8 +     87051 -----C-ACAA--CTC
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 4 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506508 12 -  29979442 AG-aga-aaac--ttc
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             74795 12 -    347723 AG-Gga-aaac--ttc
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64609  8 -     89534 -----G-AAAT--GTC
i Allactaga_bullata.AllBul_scaffold_9566                 I 4 C 0
s Allenopithecus_nigroviridis.k141_3361533                    8899 12 -     52922 AG-GAG-AATT--TTC
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          8824 12 -     28001 AG-GAG-AATT--TTC
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           8950 12 -      9772 AG-GAG-AATT--TTC
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            107 12 -     12518 AG-GAG-AATT--TTC
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      182703 12 +    412891 AG-GGG-AAAT--GTT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       6836  7 +     20879 -------AAAT--TTC
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 3 C 0
s Arctocebus_calabarensis.k141_288239                        14023  9 +     17124 AG-ATA-AAAA-----
i Arctocebus_calabarensis.k141_288239                    I 4 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2055 12 +     43469 AG-GGG-AAAT--GTT
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  48878 12 -     92717 AG-GGA-AATT--TTC
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              49503 12 +     85213 AG-GGA-AATT--TTC
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191123 10 +  23207421 ---GGG-AGAT--TTC
i Balaenoptera_acutorostrata.KI537508.1                  I 2 C 0
s Balaenoptera_bonaerensis.DF707048.1                         1589 10 -     18090 ---GGG-AGAT--TTC
i Balaenoptera_bonaerensis.DF707048.1                    I 2 C 0
s Camelus_bactrianus.KN276810.1                            9998476  8 -  17673402 -----G-AAGT--TTC
i Camelus_bactrianus.KN276810.1                          I 3 C 0
s Camelus_dromedarius.KN272107.1                           2330940  8 -   7040546 -----G-AAGT--TTC
i Camelus_dromedarius.KN272107.1                         I 3 C 0
s Camelus_ferus.KB017975.1                                  399216  8 -   1652518 -----G-AAGT--TTC
i Camelus_ferus.KB017975.1                               I 3 C 0
s CanFam4.chr16                                           17795361 12 -  60362399 AG-GGG-AAAT--TTC
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181417 12 -    185531 AG-GGG-AAAT--TTC
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9030804 12 -   9314153 AG-GGG-AAAT--TTC
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955068 12 -  59632846 AG-GGG-AAAT--TTC
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496372 12 +  63665305 AG-GGG-AAAT--TTC
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                     560  1 -     12242 A---------------
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 1
s Carlito_syrichta.NW_007259797.1                           140326 12 -    496798 AG-AGG-AATT--TTC
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2473 12 -     11696 AG-GGG-AAAT--GTT
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133242  8 +    179628 -----G-AAAT--TTC
i Castor_canadensis.CasCan_scaffold_2074                 I 4 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     88285 14 +    217609 AG-GGG-AAAAATTTC
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18347076  8 -  23392119 -----G-AAAT--TTC
i Cavia_aperea.AVPZ01000300.1                            I 4 C 0
s Cavia_porcellus.DS562891.1                              18359336  8 -  23407841 -----G-AAAT--TTC
i Cavia_porcellus.DS562891.1                             I 4 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98211  8 +    143979 -----G-AAAT--TCC
i Cavia_tschudii.CavTsc_scaffold_8919                    I 4 C 0
s Cephalopachus_bancanus.k141_2037105                         4244 12 -      8605 AG-AGG-AATT--TTC
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227447 12 +  27778364 TG-GGg-aaat--ttc
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2165 12 -      3715 TG-GGG-AAAT--TTC
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4469868 12 +   4669795 AG-GAG-AATT--TTC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8417 12 -     19203 AG-GAG-AATT--TTC
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           2836 12 +      8260 AG-GAG-AATT--TTC
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3066 12 +     27781 AG-GAG-AATT--TTC
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3212 12 -     20310 AG-GAG-AATT--TTC
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6196 12 +     29689 AG-GAG-AATT--TTC
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             549 12 +      9989 AG-GAG-AATT--TTC
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           8884 12 -     27936 AG-GAG-AATT--TTC
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             8903 12 -     11289 AG-GAG-AATT--TTC
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811279 12 +  39242232 AG-GAG-AATT--TTC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21216970 12 -  21565898 AG-GAG-AATT--TTC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34090 12 -     53127 AG-GAG-AATT--TTC
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1382 12 +      7159 AG-GAG-AATT--TTC
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        8895 12 -     27947 AG-GAG-AATT--TTC
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          8871 12 +     17596 AG-GAG-AATT--TTC
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39365 12 -     41420 AG-GAG-AATT--TTC
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4388 12 -      6351 AG-GGA-AAAT--TTC
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16302 12 -     52598 AG-GGA-AATT--TTC
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           11651 12 +     57038 AG-GGA-AATT--TTC
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1248110  8 +   2543920 -----G-AAAT--TCC
i Chinchilla_lanigera.JH722012.1                         I 4 C 0
s Chlorocebus_aethiops.ctg25                              18422834 12 -  18827391 AG-GAG-AATT--TTC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9277 12 -     50209 AG-GAG-AATT--TTC
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416282 12 + 135778131 AG-gag-aatt--ttc
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 14721 12 +     19366 AG-GGG-AAAT--TTC
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            169817 12 +    839153 ag-ggg-AAAT--TTC
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1904805  9 +   2368649 ----AG-AATT--TTC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944423  9 + 200372422 ----AG-AATT--TTC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31317  9 +     84244 ----AG-AATT--TTC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545547  9 -  53390261 ----ga-aaat--ttc
i Condylura_cristata.JH655891.1                          I 11 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10109  9 -     20389 ----GG-AAAT--TTC
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 3 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 46553  8 +     63868 -----G-ACAT--TTC
i Cricetomys_gambianus.CriGam_scaffold_18520             I 4 C 0
s Cricetulus_griseus.LT883664.1                           11663546  7 + 224834208 -----C-ACAT--T-T
i Cricetulus_griseus.LT883664.1                          I 4 C 0
s Crocidura_indochinensis.CroInd_scaffold_603213               700 11 +      1923 AA-GGA-AAA---TTC
i Crocidura_indochinensis.CroInd_scaffold_603213         I 4 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             17564 12 -     87169 AG-GAA-AAAC--TTC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  34980  8 +     51376 -----G-AAAT--TCC
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 4 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2455  8 +      5455 -----G-AAAT--TCC
i Cuniculus_paca.CunPac_flattened_line_231100            I 4 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793             844  8 +      3576 -----G-AAAT--TCC
i Dasyprocta_punctata.DasPun_flattened_line_206793       I 4 C 0
s Dasypus_novemcinctus.JH564415.1                            60635 12 +   2246927 ag-ggg-aaat--ttc
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532479 12 -  12879189 AG-GGG-AATT--TTC
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16810759 10 +  35494412 ---GGG-AGAT--TTC
i Delphinapterus_leucas.KZ290073.1                       I 2 C 0
s Desmodus_rotundus.KZ672289.1                             8627504 12 +  20541912 AG-GGG-AAAT--GTT
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  668979 12 +   1390856 TA-GGG-aaat--ttc
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2054 12 +    198055 TG-GGG-AAAT--TTC
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    33903  8 +     67921 -----G-AAAT--TCC
i Dinomys_branickii.DinBra_scaffold_21862                I 4 C 0
s Dipodomys_ordii.KN672350.1                              18895424  3 +  37912305 -----G-AA-------
i Dipodomys_ordii.KN672350.1                             I 4 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  11633  3 +     14536 -----G-AA-------
i Dipodomys_stephensi.DipSte_scaffold_75855              I 4 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31097  8 -     42551 -----G-AAAT--TCC
i Dolichotis_patagonum.DolPat_scaffold_30833             I 4 C 0
s Eidolon_helvum.KE759718.1                                   7018 12 +     11740 AA-GGG-AAAT--TTG
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1088583 12 +  10337057 aG-AGG-AAAT--TTC
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          12352  8 -    110024 -----C-ACAT--TTT
i Ellobius_lutescens.LOEQ01008920.1                      I 4 C 0
s Ellobius_talpinus.LOJH01123422.1                            3302  8 +      5358 -----C-ACAT--TTT
i Ellobius_talpinus.LOJH01123422.1                       I 4 C 0
s Enhydra_lutris.KZ291758.1                               16325365 12 -  41312741 AG-AGA-AAAC--TTC
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2143361  6 -  14770903 --------AAT--GTC
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279320 12 +   4378816 TG-GGG-aaat--ttc
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527141 12 -  39960074 TG-GGG-aaat--ttc
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29156 12 +    498745 TG-GGg-aaat--ttc
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3320373 12 -   7059049 TG-AGG-AAAT--TTC
i Erinaceus_europaeus.JH835339.1                         I 4 C 0
s Erythrocebus_patas.Contig38                             21199517 12 -  21539334 AG-GAG-AATT--TTC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10435 10 +    133382 ---GGG-AGAT--TTC
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 2 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24373 10 -     44125 ---GGG-AGAT--TTC
i Eubalaena_japonica.EubJap_flattened_line_31514         I 2 C 0
s Felis_catus.KN305074.1                                       219 12 -      2052 AG-AAA-AAAC--TTC
i Felis_catus.KN305074.1                                 I 33 C 0
s Felis_catus_fca126.CM031415.1                           20184985 12 + 205367284 AG-AAA-AAAC--TTC
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_125938                10099 12 -     11347 AG-AAA-AAAC--TTC
i Felis_nigripes.FelNig_flattened_line_125938            C 0 C 0
s Fukomys_damarensis.KN121974.1                             848120  8 +   3816255 -----G-AGAT--TTT
i Fukomys_damarensis.KN121974.1                          I 4 C 0
s Galagoides_demidoff.k141_31856                              2513 12 -      3432 AG-GTA-AATT--TTC
i Galagoides_demidoff.k141_31856                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25028 12 +     26054 AT-GGG-AAAT--TTT
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            29952  8 +     49224 -----G-AAAT--TTT
i Glis_glis.GliGli_scaffold_19807                        I 3 C 0
s Gorilla_beringei.k141_3596273                               9864 12 -     32273 AG-GAG-AATT--TTC
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186332017 12 + 186649187 ag-gAG-AATT--TTC
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   29674  8 +     78134 -----G-AAAT--TTT
i Graphiurus_murinus.GraMur_scaffold_10447               I 3 C 0
s Helogale_parvula.HelPar_flattened_line_2585               230745 12 +    327341 AG-GAA-AAAC--TTC
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20659011  8 +  22651954 -----G-AGAT--TTC
i Heterocephalus_glaber.JH602082.1                       I 4 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_173205                2939 12 -      3357 AG-GGT-AAAT--TCC
i Heterohyrax_brucei.HetBruBak_scaffold_173205           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111614 10 +    128679 ---GGG-AGAT--TTC
i Hippopotamus_amphibius.HipAmp_scaffold_9076            I 2 C 0
s Hipposideros_armiger.JXIK01000431.1                       107977 12 +   1711038 AG-GGG-GAAT--ctt
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39416 12 +     43066 AG-GGG-GAAT--TTT
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    428851 12 +    630532 AG-GAG-AATT--TTC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  32847 12 +     55795 AG-GAA-AAAC--TTC
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19455  8 -    143317 -----G-AAAT--TCC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 4 C 0
s Hylobates_agilis.k141_307679                               11769 12 -     15490 AG-GAG-AAAT--TTC
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              53774 12 +     67168 AG-GAG-AAAT--TTC
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189537221 12 - 191637585 AG-GAG-AAAT--TTC
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3330319 12 -  11177569 AG-GAG-AAAT--TTC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80547  8 +    135385 -----G-AAAT--TTC
i Hystrix_cristata.HysCri_scaffold_5660                  I 4 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514170  8 -   7955117 -----G-AAAT--TTC
i Ictidomys_tridecemlineatus.JH393364.1                  I 3 C 0
s Indri_indri.k141_3655594                                   17735 12 +     31101 AG-GAG-AATT--TTC
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               21976 10 +     23964 ---GGG-AGAT--TTC
i Inia_geoffrensis.IniGeo_flattened_line_48101           I 2 C 0
s Jaculus_jaculus.JH725527.1                               8270971  8 -   9596543 -----G-AAAT--GTC
i Jaculus_jaculus.JH725527.1                             I 4 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1243 10 -      3359 ---GGG-AGAT--TTC
i Kogia_breviceps.KogBre_flattened_line_192630           I 2 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    11498  6 -     42476 --------AAT--GTC
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6358 12 -     23766 AG-GGG-AATT--TTC
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24305 12 +     45836 AG-GGG-AATT--TTC
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31215 12 -     32627 AG-GGG-AATT--TTC
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      22363 12 +     54090 AG-GGG-AATT--TTC
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.APMU01165359.1                      1546 12 -      1663 AG-GGA-AAAC--TTC
i Leptonychotes_weddellii.APMU01165359.1                 C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     3183  9 -     14121 -----CAAAAT--TTT
i Lepus_americanus.LepAme_scaffold_107385                I 3 C 0
s Lipotes_vexillifer.KE559953.1                             267057 10 -    662738 ---GGG-AGAT--TTC
i Lipotes_vexillifer.KE559953.1                          I 2 C 0
s Lophocebus_aterrimus.ctg367                              1431035 12 +   1826925 AG-GAG-AATT--TTC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             261 12 +     11245 ag-aga-aaaa--ttc
i Loris_lydekkerianus.k141_2539221                       I 4 C 0
s Loris_tardigradus.ctg83                                   999096 12 +   6120653 ag-aga-aaaa--ttc
i Loris_tardigradus.ctg83                                I 4 C 0
s Loxodonta_africana.GL010049.1                            4214058 12 -  43346337 AG-GGT-AAAT--TTC
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951308 12 -  59628241 AG-GGG-AAAT--TTC
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               1223 12 +     40492 AG-GAG-AATT--TTC
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670483 12 +  60120075 AG-GAG-AATT--TTC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  6981 12 -     26193 AG-GAG-AATT--TTC
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            74772 12 -    114318 AG-GAG-AATT--TTC
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   494 12 -     23192 AG-GAG-AATT--TTC
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                 9943 12 -     29190 AG-GAT-AATT--TTC
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18514 12 +     37952 AG-GAT-AATT--TTC
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833602 12 + 187317192 aG-GAG-AATT--TTC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452160 12 -  25927173 CG-GAT-AATT--TTC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74363 12 +     89720 AG-GAT-AATT--TTC
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1360 12 +     20474 AG-GAG-AATT--TTC
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1161 12 -     14993 AG-GAT-AATT--TTC
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  323793 12 -    668171 AG-GAT-AATT--TTC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15303 12 -     15935 AG-GAG-AATT--TTC
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20099 12 -     45290 AG-GAT-AATT--TTC
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87160 12 +     94391 AA-GGA-AAAT--TTA
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23931653 12 -  24302211 AG-GAG-AATT--TTC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               345833 12 +    752769 AG-GAG-AATT--TTC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15184 12 +    737560 AG-GGG-AAAT--TTC
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              46574 12 -    317179 AG-GGG-AAAT--TTC
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097013  8 -  40650429 -----g-aaat--ttc
i Marmota_marmota.CZRN01000018.1                         I 3 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6423 12 -    207569 AG-AGG-AAAT--TTC
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              5604 12 +     13704 AG-AGA-AAAC--TTC
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 27863  8 +    140813 -----A-ACAT--TTC
i Meriones_unguiculatus.MerUng_scaffold_7390             I 4 C 0
s Mesocricetus_auratus.KB708134.1                         12177893  7 -  29670104 -----C-TCAT--T-T
i Mesocricetus_auratus.KB708134.1                        I 4 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    2644 10 +     10310 ---GGG-AGAT--TTC
i Mesoplodon_bidens.MesBid_scaffold_108144               I 2 C 0
s Microcebus_murinus.CM007674.1                           18282890 12 -  93316391 AG-GGG-ACTT--TTC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    15046 12 -    145209 AG-AGG-GAAT--TTC
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13020 12 -     19307 AG-GGG-AAAT--GTT
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11256270  8 -  27267610 -----c-atat--ttt
i Microtus_ochrogaster.CM001695.1                        I 4 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1848446 12 +   8254450 AG-GGG-AAAC--GAC
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32315 12 +     64694 AG-GGG-AAAC--GAC
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3390 12 -     28506 AG-GAG-AATT--TTC
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        61793 12 -     63350 AG-GGA-AAAC--TTC
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      4251 12 -     37649 AG-GGG-ACTT--TTC
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26149 10 -    437263 ---GGG-AGAT--TTC
i Monodon_monoceros.MonMon_M_scaffold_103                I 2 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137419 12 -    366855 AG-AAG-AAAT--ATT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   23924 12 +     37127 AG-GAA-AAAC--TTC
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           4510  6 +     14753 --------CAT--GTC
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              1943  8 +     14296 -----T-AAAT--GTT
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 3 C 0
s Mustela_putorius.JH418006.1                               297249 12 -  14710649 AG-AAA-AAAC--TTC
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     70724  8 -     80779 -----G-AAAT--CCC
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 3 C 0
s Myotis_brandtii.KE162005.1                                277618  6 -  10118263 --------AAT--GTC
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585189  6 -   6019432 --------AAT--GTC
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3901406  6 -   4330536 --------AAT--GTC
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        31955  6 +     33610 --------AAT--GTC
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              185683 12 +    196477 AG-GGG-AAAT--TTC
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025120  8 -   3037898 -----G-AAAT--TTC
i Nannospalax_galili.KL204047.1                          I 4 C 0
s Nasalis_larvatus.k141_413338                                9403 12 +     21681 AA-GAG-ATTT--TTC
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20298784 12 +  31847680 AG-GGA-AAAC--TTC
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865105 10 +   7148211 ---GGG-AGAT--TTC
i Neophocaena_asiaeorientalis.KZ687982.1                 I 2 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    755983 12 +    783361 CG-GGG-AAAT--ATT
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145569 12 -   9404916 AG-GGG-AAAT--TTC
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102574069  8 - 196305487 -----a-aaaa--ttc
i Nycticebus_bengalensis.LG01                            I 4738 C 0
s Nycticebus_coucang.k141_5327727                             1754  9 +      8486 ----ga-aaaa--ttc
i Nycticebus_coucang.k141_5327727                        N 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744497  8 + 199412804 -----a-aaaa--ttc
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 11135 C 0
s Octodon_degus.JH651603.1                                  746016  8 +  11899542 -----G-AAAT--TTC
i Octodon_degus.JH651603.1                               I 4 C 0
s Odobenus_rosmarus.KB229312.1                              500309 12 -   2017862 AG-GGA-AAAC--TTC
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   16610  8 +     28053 -----C-ACAT--TTT
i Ondatra_zibethicus.OndZib_scaffold_46174               I 4 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    74713  8 +    102263 -----C-ACAT--TTC
i Onychomys_torridus.OnyTor_scaffold_2986                I 4 C 0
s Orcinus_orca.KB316932.1                                  2781020 10 -  10937097 ---GGG-AGAT--TTC
i Orcinus_orca.KB316932.1                                I 2 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6406 12 -     18566 AG-GGG-AAAT--TTC
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67144037  9 + 174332312 -----caaaat--ttt
i Oryctolagus_cuniculus.CM000791.1                       I 3 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458323 12 -    559221 AG-GGG-GAAT--TTC
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Pan_paniscus.KQ411613.1                                    35788 12 +     80009 ag-gAG-AATT--TTC
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189136738 12 + 189151597 ag-gAG-AATT--TTC
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  140199 12 +    230217 AG-AAA-AAAC--TTC
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                251728 12 +  18783137 AG-AAA-AAAC--TTC
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4710169 12 -   8748460 ag-aaa-aaac--ttC
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183436975 12 + 183742232 AG-GAG-AATT--TTC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1037 12 +     20448 AG-GAG-AATT--TTC
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20557659 12 +  20919399 AG-GAG-AATT--TTC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_4051466                                   1237 12 -      1598 AG-GAG-AATT--TTC
i Papio_kindae.k141_4051466                              C 0 C 0
s Papio_papio.k141_802527                                     3069 12 +     27711 AG-GAG-AATT--TTC
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  3058 12 +      9205 AG-GAG-AATT--TTC
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272       989 12 -     78924 AG-GAA-AAAC--TTC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            4243 12 +     13100 ag-ata-aaaa--ttc
i Perodicticus_ibeanus.k141_855320                       I 4 C 0
s Perodicticus_potto.k141_1092580                             2611 12 +     25941 ag-ata-aaaa--ttc
i Perodicticus_potto.k141_1092580                        I 4 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       24967  8 +     32600 -----G-AATT--TCT
i Perognathus_longimembris.PerPac_flattened_line_34437   I 4 C 0
s Peromyscus_maniculatus.KI615324.1                       18187499  8 -  18517816 -----T-ACAT--TTC
i Peromyscus_maniculatus.KI615324.1                      I 4 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25476  8 -     29689 -----G-AGAT--TCT
i Petromus_typicus.PetTyp_scaffold_42190                 I 11 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8068  9 +     63832 ----GG-AGAT--TTC
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 3 C 0
s Piliocolobus_badius.k141_1234363                           37921  9 +     62158 ----AG-AATT--TTC
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        32650  9 +     89929 ----AG-AATT--TTC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34066  9 +     51399 ----AG-AATT--TTC
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290285  9 -  14605196 ----AG-AATT--TTC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_7723             78976  6 +     79650 --------AAT--GTC
i Pipistrellus_pipistrellus.PipPip_scaffold_7723         C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           33779 10 +     35617 ---GGG-AGAT--TTT
i Platanista_gangetica.PlaMin_flattened_line_32310       I 2 C 0
s Pongo_abelii.CM009266.2                                189124827 12 + 189387572 AG-GAG-AATT--TTC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9564670 12 +   9816681 AG-GAG-AATT--TTC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               67559 12 -     81375 AG-GAG-ATTT--TTC
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9383 12 +     10147 AG-GAG-ATTT--TTC
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9547 12 -     22811 AG-GGT-AAAT--TCT
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     985608 12 +   2598838 AG-GGG-TATT--TTC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          23896 12 +     38485 AG-GGG-AATT--TTC
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                               58 12 +      4256 AG-GGG-AATT--TTC
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          21416 12 +     35766 AG-GGG-AATT--TTC
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1630595                          16695 12 +     17239 AG-GGG-AATT--TTC
i Propithecus_perrieri.k141_1630595                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        23410 12 -     67325 AG-GGG-AATT--TTC
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_1019028                         13126 12 -     13615 AG-GGG-AATT--TTC
i Propithecus_verreauxi.k141_1019028                     C 0 C 0
s Psammomys_obesus.NESX01036370.1                             5497  8 -     21651 -----A-ACAT--TTC
i Psammomys_obesus.NESX01036370.1                        I 4 C 0
s Pteronotus_parnellii.KE909381.1                            10801 12 -     21811 AG-AGG-AAAT--GTT
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36269 13 +     42204 AG-AGAAAAAC--TTC
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973291 12 +  28871421 AT-GGG-AAAT--TTG
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1227 12 -      8028 AT-GGG-AAAT--TTG
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20262704 12 -  38429054 AG-AAA-AAAC--TTC
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                              9387 12 -     91421 AG-GAG-ATTT--TTC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603523 12 +   7812017 AG-GAG-ATTT--TTC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9359 12 -     72585 AG-GAG-ATTT--TTC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr8                                 113027781  8 - 133307652 -----G-TCAT--TTC
i Rattus_norvegicus.chr8                                 I 4 I 514
s Rhinolophus_sinicus.LVEH01000134.1                        366525 12 -   3329780 AG-GGG-AAAT--CTC
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                              773 12 -     11128 AG-GAG-ATTT--TTC
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230151 12 - 195417433 AG-GAG-ATTT--TTC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7665859 12 +   7961872 AG-GAG-ATTT--TTC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84273 12 -     96226 AA-GGG-AAAT--TTG
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    150969 12 -    313613 AG-GGG-AAAT--TTT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 8 C 0
s Semnopithecus_entellus.k141_11662                          13902 12 -     19888 AG-GAG-ATTT--TTC
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21108 12 +     39453 AG-GAG-ATTT--TTC
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            1632 12 +     27826 AG-GAG-ATTT--TTC
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1152 12 -     19483 AG-GAG-ATTT--TTC
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1216 12 +      7198 AG-GAG-ATTT--TTC
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9474 12 +     15514 AG-GAG-ATTT--TTC
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187281 12 -    191337 AG-GGG-AAAT--TTC
i Solenodon_paradoxus.SolPar_flattened_line_5840         I 4 C 0
s Sorex_araneus.JH798187.1                                13646651 11 -  18376816 AG-GGA-GAA---TTC
i Sorex_araneus.JH798187.1                               I 4 C 0
s Spermophilus_dauricus.KZ294078.1                         1947799  8 -   3870691 -----G-AAAT--TTC
i Spermophilus_dauricus.KZ294078.1                       I 3 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             26807 12 +     97271 AG-GGG-AAAC--TTC
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629               6760 12 -    196729 AA-GGA-AAAC--TTC
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   62881788 12 -  69701581 AG-GGG-AGAA--TTC
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1087456 12 -   1523678 AG-GAG-AATT--TTC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6414 12 +     41958 AG-GGG-AAAT--GTC
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69043 12 +    116680 AG-GGG-AAAT--TTC
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      114778 12 -    156842 TG-GGG-AAAT--TTC
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383241 12 +    539355 TT-GGG-AAAT--TTC
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1598868                                9217 12 -     11412 AG-AGG-AATT--TTC
i Tarsius_lariang.k141_1598868                           C 0 C 0
s Tarsius_wallacei.k141_780063                               13937 12 +     25099 AG-AGG-AATT--TTC
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422484 12 + 186847797 AG-GAG-AATT--TTC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              102630  8 +    114563 -----G-AGAG--TTT
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 11 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   1455 12 +      8208 AG-GGG-AAAT--TTC
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78560 12 +    610378 AG-GGG-AAAT--GTT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          5210 12 -     20410 AG-GAG-ATTT--TTC
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9404 12 +     15221 AG-GAG-ATTT--TTC
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5310 12 +     19930 AG-GAG-ATTT--TTC
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       1738 12 -     19997 AG-GAG-ATTT--TTC
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            41858 12 -     60166 AG-GAG-ATTT--TTC
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9331 12 -     27529 AG-GAG-ATTT--TTC
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9267 12 -     18194 AG-GAG-ATTT--TTC
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3006 12 -     21137 AG-GAG-ATTT--TTC
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    1706 12 -     10723 AG-GAG-ATTT--TTC
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                          862 12 +      9834 AG-GAG-ATTT--TTC
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19176 12 +     32220 AG-GAG-ATTT--TTC
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933274 12 +   6242583 AG-GAG-ATTT--TTC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2520 12 +     20839 AG-GAG-ATTT--TTC
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_124071                    486 12 -      2171 AT-GGA-AAAT--TTT
i Tragulus_javanicus.TraJav_scaffold_124071              I 230 C 0
s Trichechus_manatus.JH594705.1                            4291966 12 +  10818551 ag-ggT-AAAT--TTC
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2149171 12 +   4065304 CG-AAG-AAAG--TAC
i Tupaia_chinensis.KB320699.1                            I 2 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     2794 12 -     10553 CG-AAG-AAAG--TAC
i Tupaia_tana.TupTan_flattened_line_97126                I 2 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737267 10 +  33153633 ---GGG-AGAT--TTC
i Tursiops_truncatus.MRVK01000835.1                      I 2 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   51100 12 -     77625 AG-GGG-AAAT--TTT
i Uropsilus_gracilis.UroGra_scaffold_12083               I 8 C 0
s Ursus_maritimus.KK499267.1                               4846507 12 -   5085361 AG-aga-aaac--ttc
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                 5367965  8 -   5488506 -----G-AAGT--TTC
i Vicugna_pacos.KN270157.1                               I 3 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  6984 12 -     43706 AG-GGG-AAAT--TTC
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19304  8 -     24430 -----G-AAAT--TTC
i Xerus_inauris.XerIna_scaffold_48378                    I 3 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1439 12 +      2932 AG-GGA-AAAC--TTC
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9607  8 +     63895 -----A-AAAT--GTC
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 4 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            10959 10 +     12536 ---GGG-AGAT--TTC
i Ziphius_cavirostris.ZipCav_flattened_line_71469        I 2 C 0
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Saiga_tatarica.SaiTat_scaffold_373180                       3225 222 +      4321 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4576 218 +     55207 I
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Pantholops_hodgsonii.KE114653.1                          1264036 222 -   2937107 I
e Ovis_canadensis.OviCan_scaffold_2572                      173103 222 -    191736 I
e Ovis_aries.CM001607.2                                   17584682 222 +  44047080 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144328 218 +    630418 I
e Ochotona_princeps.JH802162.1                             1355292  2 +   3988456 I
e Moschus_moschiferus.MosMos_scaffold_61429                  27091 222 -     27816 I
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17151 222 +     36099 I
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Elaphurus_davidianus.JRFZ01104969.1                       309953 220 +    607251 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Capra_hircus.CM004588.1                                 18059667 222 -  44709034 I
e Capra_aegagrus.CM003241.1                               18828947 222 +  46296322 I
e Bubalus_bubalis.KI419123.1                               2818124 220 +   4408762 I
e Bos_taurus.CM000203.6                                   18082634 220 +  45695690 I
e Bos_mutus.JH880303.1                                     1124552 224 -   1948126 I
e Bos_indicus.CM003047.1                                  20271996 220 +  48749331 I
e Bison_bison.KN261452.1                                    198791 220 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    25751 222 +     34529 I
e Antilocapra_americana.AntAmePen_scaffold_12469             97280 223 -    100397 I
e Ammotragus_lervia.NIVO01071767.1                          674829 222 -   2318259 I

a score=0.000000
s hg38.chrUn_KI270753v1                                        438 25 +     62944 ATCTAAA-TT------TA-ACA-A--A--G--TG--GG----A--------------G------A-----C
s Acinonyx_jubatus.LLWD01001279.1                           816567 13 -   1699592 ATCTAAA-TT------TA-AG--------------------------------------------------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 20
s Acomys_cahirinus.AcoCah_scaffold_12655                     66323 22 +     87051 ATCTGAA-CT------GA-AGG-A--A--G--AC--TG----G----------------------------
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 2
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506520 28 -  29979442 atataaa-tg------ta-agg-a--a--g--ga--gg----g-gg-----------aaa----c------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             74807 32 -    347723 atttaaa-tt------ta-agg-a--a--g--ag--gg----g-g----a-------aaaaaacc------
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64617 23 -     89534 ATCTGAA-TT------TA-TGA-A--A--G--CT--GA---TG----------------------------
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 17
s Allenopithecus_nigroviridis.k141_3361533                    8911 25 -     52922 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          8836 25 -     28001 ATTTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           8962 25 -      9772 ATTTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            119 25 -     12518 ATTTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      182715 33 +    412891 ATCTAAA-TT------TA-AGG-A--AGAG--AA--GA----G---------AGA--A--AAACC------
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       6843 22 +     20879 ATCTAAA-TT------TA-AGG-A--A--G--TG--GA----A----------------------------
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 7
s Arctocebus_calabarensis.k141_288239                        14032 20 +     17124 --------TT------CA-AGA-A--G--A--GG--GT----A----------GA--G------T-----A
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2067 33 +     43469 ATCTAAA-CT------TA-AGG-A--AGAG--AA--GA----G---------AGA--A--AAACC------
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  48890 31 -     92717 ATCTAAA-TT------TA-AGG-A--A--G--AG--TG---TG------------TGG------A--AACC
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              49515 31 +     85213 ATCTAAA-TT------TA-AGG-A--A--G--AG--TG---TG------------TGG------A--AACC
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191133 31 +  23207421 ATCTAAA-TT------TA-agg-a--agag--ag--g-----g-gg-----------aaa---tg-----C
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         1599 31 -     18090 ATCTAAA-TT------TA-AGG-A--AGAG--AG--G-----G-----------GG-A---AATG-----C
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998484 32 -  17673402 ATCTAAA-TT------TA-AGG-A--AGAG--TC--AG----G-----------GG-A---AATC-----C
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2330948 32 -   7040546 ATCTAAA-TT------TA-AGG-A--AGAG--TC--AG----G-----------GG-A---AATC-----C
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399224 32 -   1652518 ATCTAAA-TT------TA-AGG-A--AGAG--TC--AG----G-----------GG-A---AATC-----C
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795373 30 -  60362399 ATCTAAA-TT------TA-AGG-A--A--G--GG--GG----G----------GA--A--GAAAC------
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181429 30 -    185531 ATCTAAA-TT------TA-AGG-A--A--G--GG--GG----G----------GA--A--GAAAC------
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9030816 30 -   9314153 ATCTAAA-TT------TA-AGG-A--A--G--GG--GG----G----------GA--A--GAAAC------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955080 30 -  59632846 ATCTAAA-TT------TA-AGG-A--A--G--GG--GG----G----------GA--A--GAAAC------
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496384 30 +  63665305 ATCTAAA-TT------TA-AGG-A--A--G--GG--GG----G----------GA--A--GAAAC------
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                     562  9 -     12242 ---------------------G-A--A--G--GG--AG----T----------------------------
i Capromys_pilorides.CapPil_scaffold_65020               I 1 I 5
s Carlito_syrichta.NW_007259797.1                           140338 25 -    496798 ATCTAAA-Tc------tg-taa-a--a--g--ag--ga----a--------------a------a-----a
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2485 33 -     11696 ATCTAAA-TT------TA-AGG-A--AGAG--AA--GA----G---------AGA--A--AAACC------
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133250 24 +    179628 ATGGGAA-TT------TG-AAG-AACA--G--GG--GG----A----------------------------
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 2
s Catagonus_wagneri.CatWag_scaffold_2839                     88299 31 +    217609 ATCTACA-TT------TA-AGG-A--AGCA---A--GA----G-----------GG-A---AATC-----C
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18347084 22 -  23392119 ACGTAAA-TT------TA-AGG-A--A--G--GG--AG----T----------------------------
i Cavia_aperea.AVPZ01000300.1                            C 0 I 5
s Cavia_porcellus.DS562891.1                              18359344 22 -  23407841 ACGTAAA-TT------TA-AGG-A--A--G--GG--AG----T----------------------------
i Cavia_porcellus.DS562891.1                             C 0 I 5
s Cavia_tschudii.CavTsc_scaffold_8919                        98219 22 +    143979 ACGTAAA-TT------TA-AGG-A--A--G--GG--AG----T----------------------------
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 I 5
s Cephalopachus_bancanus.k141_2037105                         4256 25 -      8605 ATCGAAA-TC------TG-TGA-A--A--G--AG--GA----A--------------A------C-----A
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227459 32 +  27778364 atctaaa-tt------ta-agg-a--agag--ag--gg----g------a---a---aaaa---c-----t
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2177 32 -      3715 ATCTAAA-TT------TA-AGG-A--AGAG--AG--GG----G-----------AA-A---AAAC-----T
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4469880 25 +   4669795 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8429 25 -     19203 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           2848 25 +      8260 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3078 25 +     27781 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3224 25 -     20310 ATTTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6208 25 +     29689 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             561 25 +      9989 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           8896 25 -     27936 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             8915 25 -     11289 ATTTAAA-TG------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811291 25 +  39242232 ATTTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21216982 25 -  21565898 ATTTAAA-TG------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34102 25 -     53127 ATTTAAA-TG------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1394 25 +      7159 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        8907 25 -     27947 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          8883 25 +     17596 ATTTAAA-TG------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39377 25 -     41420 ATTTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4400 29 -      6351 ATCTAAA-TT------TA-AGG-A--A--G--AA--GT----A----------CA--A----AAG-----C
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16314 31 -     52598 ACCTAAC-TT------TA-AGG-A--A--G--GG--GG---TG------------TGG------A--AATC
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           11663 31 +     57038 ACCTAAC-TT------TA-AGG-A--A--G--GG--GG---TG------------TGG------A--AATC
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1248118 22 +   2543920 acttaaa-at------ta-agg-a--a--g--gg--gG----T----------------------------
i Chinchilla_lanigera.JH722012.1                         C 0 I 5
s Chlorocebus_aethiops.ctg25                              18422846 25 -  18827391 ATTTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9289 25 -     50209 ATTTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416294 25 + 135778131 atttaaa-tt------ta-atg-a--a--g--TG--GG----A--------------G------A-----C
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 14733 29 +     19366 ATCTAAA-CT------TA-AGG-A--G--G--AA--GG----A-----------AT-A----AAA-----T
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            169829 28 +    839153 ATCTAAA-C-------TA-AGG-A--G--G--AA--GG----A-----------AT-A----AAA-----T
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_172426               8849  9 -     10935 -------------------------------------G----A-----------AA-A----CAC-----C
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          N 0 C 0
s Colobus_angolensis.KN981557.1                            1904814 25 +   2368649 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944432 25 + 200372422 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31326 25 +     84244 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545556 48 -  53390261 ctttata-tt------ta-agG-ATTataa--ggaggg----gtgggggagcgaAT-G--GAAAC-----T
i Condylura_cristata.JH655891.1                          C 0 I 10
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10118 11 -     20389 ATCTAAA-TT------TA-----------------------------------------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 17
s Cricetomys_gambianus.CriGam_scaffold_18520                 46561 28 +     63868 ATCTGAG-TTTAAGTTTA-AGA-A--A--G--GG--AG----G----------------------------
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 2
s Cricetulus_griseus.LT883664.1                           11663553 22 + 224834208 AAGTGAA-TT------TA-ATA-A--A--G--GG--TG----G----------------------------
i Cricetulus_griseus.LT883664.1                          C 0 I 2
s Crocidura_indochinensis.CroInd_scaffold_603213               711 33 +      1923 AAATAAA-TT------TA-AAT-A--ACAG--GG--TG----A----------GA--A--AATCA-----T
i Crocidura_indochinensis.CroInd_scaffold_603213         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             17576 24 -     87169 ACCTA-A-TG------TA-AGG-A--A--G--CG--GG----G----------GA--A-------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 6
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  34988 22 +     51376 ATGTAAA-GT------TA-AAG-A--A--G--GG--AG----T----------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 5
s Cuniculus_paca.CunPac_flattened_line_231100                 2463 22 +      5455 ATGTAAA-TT------TA-AGG-A--A--G--GG--AG----T----------------------------
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 I 19
s Dasyprocta_punctata.DasPun_flattened_line_206793             852 22 +      3576 ACGTAAA-TT------TA-AGG-A--A--G--GG--GG----T----------------------------
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 I 5
s Dasypus_novemcinctus.JH564415.1                            60647 29 +   2246927 atctaaa-tt------ta-agg-a--a--g--aa--gt----a------a---a---aaa----a-----c
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532491 30 -  12879189 ATCTAGA-TT------TA-AGG-G--A--G--GC--AG----G----------GA--A------A--AACC
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16810769 31 +  35494412 ATCTAAA-TT------TA-AGG-A--AGAG--AG--G-----G-----------GG-A---AATA-----C
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8627516 33 +  20541912 ATCTAAA-tt------ta-agg-a--agag--aa--ga----g------ag--a---aaaa--cc------
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  668991 32 +   1390856 atctaaa-tt------ta-agg-a--agag--ag--gg----g------a---a---aaaa---c-----t
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2066 32 +    198055 ATCTAAA-TT------TA-AGG-A--AGAG--AG--GG----G-----------AA-A---AAAC-----T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    33911 22 +     67921 ACATAAA-AT------TG-AGG-A--A--G--GG--GG----T----------------------------
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 5
s Dipodomys_ordii.KN672350.1                              18895427 18 +  37912305 ----AAT-TC------TA-AGA-A--A--G--GG--GA----G----------------------------
i Dipodomys_ordii.KN672350.1                             C 0 I 2
s Dipodomys_stephensi.DipSte_scaffold_75855                  11636 18 +     14536 ----AAT-TC------TA-AGA-A--A--G--GG--GA----G----------------------------
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 I 2
s Dolichotis_patagonum.DolPat_scaffold_30833                 31105 22 -     42551 ATGAAAA-TT------TA-AAG-A--A--G--GG--AG----T----------------------------
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 I 5
s Eidolon_helvum.KE759718.1                                   7030 32 +     11740 AGCTAAA-TT------TA-AGG-A--AGAG--AG--CA----G-----------GG-G--AAACC------
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1088595 16 +  10337057 ATTCACAAtc------ta-agg-a-----------------------------------------------
i Elephantulus_edwardii.JH947257.1                       C 0 I 15
s Ellobius_lutescens.LOEQ01008920.1                          12360 22 -    110024 ATCTGAA-TT------TA-AGA-A--C--A--TT--TG----G----------------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 2
s Ellobius_talpinus.LOJH01123422.1                            3310 22 +      5358 ATCTGAA-TT------TA-AGA-A--C--A--TT--TG----G----------------------------
i Ellobius_talpinus.LOJH01123422.1                       C 0 I 2
s Enhydra_lutris.KZ291758.1                               16325377 22 -  41312741 ATCTAAA-TT------TA-AGG-A--A--G--GG--GG----G----------------------------
i Enhydra_lutris.KZ291758.1                              C 0 I 5
s Eptesicus_fuscus.JH977646.1                              2143367 32 -  14770903 ATCTAAA-tt------ta-agg-a--agag--aa--ga----g------ag------aaa--ccc------
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279332 33 +   4378816 atctaaa-tt------ta-agg-a--agag--ag--gg----g------a---a---aaaaa--t-----t
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527153 33 -  39960074 atctaaa-tt------ta-agg-a--agag--ag--gg----g------a---a---aaaaa--t-----g
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29168 33 +    498745 atctaaa-tt------ta-agg-a--agag--ag--gg----g------a---a---aaaaa--t-----g
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3320385 30 -   7059049 ATGTAAA-CT------TA-AGG-G--GTAT--AT--GG----G-----------AG-A-----GT-----T
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21199529 25 -  21539334 ATTTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10445 31 +    133382 ATCTAAA-TT------TA-AGG-A--AGAG--AG--G-----G-----------GG-A---AATA-----T
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24383 31 -     44125 ATCTAAA-TT------TA-AGG-A--AGAG--AG--G-----G-----------GG-A---AATA-----C
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.KN305074.1                                       231 13 -      2052 ATGTAAA-tt------ta-ag--------------------------------------------------
i Felis_catus.KN305074.1                                 C 0 I 20
s Felis_catus_fca126.CM031415.1                           20184997 13 + 205367284 ATGTAAA-Tt------tg-gg--------------------------------------------------
i Felis_catus_fca126.CM031415.1                          C 0 I 20
s Felis_nigripes.FelNig_flattened_line_125938                10111 13 -     11347 ATGTAAA-TT------TA-AG--------------------------------------------------
i Felis_nigripes.FelNig_flattened_line_125938            C 0 I 20
s Fukomys_damarensis.KN121974.1                             848128 22 +   3816255 GTGTAAA-TT------TA-AGG-A--A--G--GG--GA----T----------------------------
i Fukomys_damarensis.KN121974.1                          C 0 I 5
s Galagoides_demidoff.k141_31856                              2525 27 -      3432 ATTTAAT-TT------TA-AAG-A--G--G--CA--GT----G------------TGG------A-----A
i Galagoides_demidoff.k141_31856                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25040 24 +     26054 A---AAA-TT------TA-AGG-A--A--G--TG--GG----G----------GA--A------C-----C
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            29960 22 +     49224 ATCTAAA-TT------TA-AGG-A--A--G--GT--GG----G----------------------------
i Glis_glis.GliGli_scaffold_19807                        C 0 I 7
s Gorilla_beringei.k141_3596273                               9876 25 -     32273 ATCTAAA-TT------TA-ACA-A--A--G--TG--GG----A--------------G------A-----C
i Gorilla_beringei.k141_3596273                          C 0 I 31
s Gorilla_gorilla.LT578341.1                             186332029 25 + 186649187 ATCTAAA-TT------TA-ACA-A--A--G--TG--GG----A--------------G------A-----C
i Gorilla_gorilla.LT578341.1                             C 0 I 31
s Graphiurus_murinus.GraMur_scaffold_10447                   29682 22 +     78134 ATCTAAA-TT------TA-AAG-A--A--G--GT--GG----A----------------------------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 7
s Helogale_parvula.HelPar_flattened_line_2585               230757 25 +    327341 GTGTAAA-TC------TA-AGG-A--A--G--TG--GG----G----------GA--A-------------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 6
s Heterocephalus_glaber.JH602082.1                        20659019 19 +  22651954 ATGTAAA-TT------TA-AGC-A--A--G--AG-------------------------------------
i Heterocephalus_glaber.JH602082.1                       C 0 I 5
s Heterohyrax_brucei.HetBruBak_scaffold_173205                2951 29 -      3357 ATCTACA-TT------TA-AGG-A--A--G--AC--AA----A-----------AA-G----CAC-----C
i Heterohyrax_brucei.HetBruBak_scaffold_173205           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111624 31 +    128679 ATCTAAA-TT------TA-AGG-A--AGAG--AG--G-----G-----------GG-A---AATG-----C
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       107989 32 +   1711038 atctaaa-tt------ta-aaa-a--ggag--ag--tA----G-----------GG-A--AAACC------
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39428 32 +     43066 AGGTAAA-TT------TA-AAA-A--GGAG--AG--TG----G-----------GG-A--AAACC------
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    428863 25 +    630532 GTCTAAA-TT------TA-ACA-A--A--G--TG--GG----A--------------G------A-----C
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  32859 25 +     55795 ATGTAAA-TT------TA-AGG-A--G--G--GG--GG----G-----------GG-G-------------
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 4
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19463 22 -    143317 ATGTAAA-TT------TA-AGG-A--A--G--GG--AC----T----------------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 5
s Hylobates_agilis.k141_307679                               11781 25 -     15490 GTCTAAA-TT------TA-ACA-A--A--G--TG--GG----A--------------G------A-----C
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              53786 25 +     67168 GTCTAAA-TT------TA-ACA-A--A--G--TG--GG----A--------------G------A-----C
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189537233 25 - 191637585 GTCTAAA-TT------TA-ACA-A--A--G--TG--GG----A--------------G------A-----C
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3330331 25 -  11177569 GTCTAAA-TT------TA-ACA-A--A--G--TG--GG----A--------------G------A-----C
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80555 22 +    135385 ATATGTG-TT------TA-AGG-A--A--G--GG--GG----T----------------------------
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 6
s Ictidomys_tridecemlineatus.JH393364.1                    7514178 11 -   7955117 ATCTAAA-TT------TA-----------------------------------------------------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 3
s Indri_indri.k141_3655594                                   17747 31 +     31101 ATCTAAA-TT------TA-AGG-A--A--G--GG--GG---TG------------TGG------A--AACC
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               21986 31 +     23964 ATCTAAA-TT------TA-AGG-A--AGAG--AG--G-----G-----------GG-A---AATA-----C
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8270979 23 -   9596543 ATCTGAA-TT------TA-AGA-A--A--G--TG--GA---GG----------------------------
i Jaculus_jaculus.JH725527.1                             C 0 I 17
s Kogia_breviceps.KogBre_flattened_line_192630                1253 31 -      3359 ATCTAAA-TT------TA-AGG-A--AGAG--AG--G-----G-----------GG-A---AATA-----C
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    11504 34 -     42476 ATCTAAA-TT------TA-AGG-G--AGAG--AA--GA----G---------AGAG-A--AACCT------
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6370 31 -     23766 ATCTACA-TT------TA-AGG-A--A--G--GG--GG---TG----------TA--A------A--AACC
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24317 31 +     45836 ATCTACA-TT------TA-AGG-A--A--G--GG--GG---TG----------TA--G------A--AACC
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31227 31 -     32627 ATCTATG-TT------TA-AGG-A--A--G--GG--GG---TG------------TGG------A--AACC
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      22375 31 +     54090 ATCTACA-TT------TA-AGG-A--A--G--AG--GG---TG----------TA--A------A--AACC
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.APMU01165359.1                      1558 22 -      1663 ATCTAAA-TT------TA-AGG-a--c--a--ag--gg----g----------------------------
i Leptonychotes_weddellii.APMU01165359.1                 C 0 N 0
s Lepus_americanus.LepAme_scaffold_107385                     3192 33 -     14121 ATCAAAA-TT------TA-AAG-A--G--GGGGT--GG----G------TTGAGA--A------C-----C
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             267067 31 -    662738 ATCTAAA-TT------TA-AGG-A--AGAG--AG--G-----G-----------GG-A---AATA-----C
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1431047 25 +   1826925 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             273 27 +     11245 aattaaa-tt------ca-aga-a--g--g--gg--gt----a-gg-----------g------t-----a
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999108 27 +   6120653 aattaaa-tt------ca-aga-a--g--g--gg--gt----a-gg-----------g------T-----a
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214070 29 -  43346337 ATGTATa-tt------ta-agg-a--a--a--at--ta----a------a---a---aca----c-----c
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951320 30 -  59628241 ATCTAAA-TT------TA-AGG-A--A--G--GG--GG----G----------GA--A--GAAAC------
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               1235 25 +     40492 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670495 25 +  60120075 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  6993 25 -     26193 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            74784 25 -    114318 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   506 25 -     23192 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                 9955 25 -     29190 ATCTAAA-CT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18526 25 +     37952 ATCTAAA-CT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833614 25 + 187317192 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452172 25 -  25927173 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74375 25 +     89720 ATCTAAA-CT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1372 25 +     20474 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1173 25 -     14993 ATCTAAA-CT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  323805 25 -    668171 ATCTAAA-CT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15315 25 -     15935 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20111 25 -     45290 ATCTAAA-CT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87172 32 +     94391 ATCTAAA-TT------TA-AGG-A--AGAG--AG--CA----G-----------GG-G--AAACC------
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23931665 25 -  24302211 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               345845 25 +    752769 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15196 32 +    737560 ATCTAGA-TT------TA-AGG-A--AGAG--AG--GG----C-----------AT-A--AAACC------
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              46586 32 -    317179 ACCTAGA-TT------TA-AGG-A--AGAG--AG--GG----C-----------AT-A--AAACC------
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097021 22 -  40650429 atttaaa-tt------ta-agg-a--A--G--AG--GA----G----------------------------
i Marmota_marmota.CZRN01000018.1                         C 0 I 7
s Megaderma_lyra.MegLyr_scaffold_4542                         6435 32 -    207569 ATCTAAA-TT------TA-TGA-A--AGAG--AG--TA----G-----------AG-A--AAAGC------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              5616 22 +     13704 ATCTAAA-TT------TA-AGG-A--A--G--CG--GG----G----------------------------
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 6
s Meriones_unguiculatus.MerUng_scaffold_7390                 27871 22 +    140813 ATCTGAA-TT------TA-AGG-A--A--G--GA--TG----G----------------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 2
s Mesocricetus_auratus.KB708134.1                         12177900 22 -  29670104 ATCTGAA-TT------TA-ATA-A--A--G--GG--TG----A----------------------------
i Mesocricetus_auratus.KB708134.1                        C 0 I 2
s Mesoplodon_bidens.MesBid_scaffold_108144                    2654 31 +     10310 ATCTAAA-TT------TA-AGG-A--AGAG--AG--G-----G-----------GG-A---AATA-----C
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18282902 31 -  93316391 ACCTAAC-TT------TA-AGG-A--A--G--CA--GG---TG------------TGG------A--AACC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    15058 16 -    145209 ATCCATG-TA------TAAAGG-A-----------------------------------------------
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 13
s Micronycteris_hirsuta.MicHir_scaffold_52381                13032 16 -     19307 ATCTAAA-TT------TA-AGG-A--A--------------------------------------------
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 12
s Microtus_ochrogaster.CM001695.1                         11256278 22 -  27267610 atttgaa-tt------ta-aga-A--A--G--GC--TG----G----------------------------
i Microtus_ochrogaster.CM001695.1                        C 0 I 2
s Miniopterus_natalensis.LDJU01000034.1                    1848458 32 +   8254450 ATCTAAA-Tt------ta-agg-g--agag--aa--ga----g------ag------aaaa--tg------
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32327 32 +     64694 ATCTAAA-TT------TA-AGG-G--AGAG--AA--GA----G-----------AG-A--AAATG------
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3402 25 -     28506 ATTTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        61805 22 -     63350 ATCTAAA-TT------TA-AGG-A--C--A--AG--GG----g----------------------------
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 I 220
s Mirza_zaza.k141_952172                                      4263 31 -     37649 ACCTAAC-TT------TA-AGG-A--A--G--TG--GG---TG------------TGG------A--AACC
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26159 31 -    437263 ATCTAAA-TT------TA-AGG-A--AGAG--AG--G-----G-----------GG-A---AATA-----C
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137431 32 -    366855 ATCTAAA-TT------CA-AGG-A--AGAGAAGA--GA----G--------------A--AAATC------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   23936 25 +     37127 ATGTAAA-TC------TA-AGG-T--A--G--TG--GG----G----------GA--A-------------
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 6
s Murina_feae.MurFea_scaffold_85699                           4516 32 +     14753 ATCTAAG-TT------TA-AGG-A--AGAG--AA--GG----G-----------AG-A--AACCC------
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              1951 22 +     14296 ATTTAAA-TT------TA-AGG-A--A--G--AT--GG----G----------------------------
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 7
s Mustela_putorius.JH418006.1                               297261 30 -  14710649 ATCTAAA-Tt------ta-agg-a--a--g--gg--ag----g------a---a---aaaa--cc------
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     70732 22 -     80779 ATGTAAA-TT------TA-AGG-A--A--G--GA--AG----T----------------------------
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 I 5
s Myotis_brandtii.KE162005.1                                277624 32 -  10118263 ATCTAAA-Tt------ta-agg-a--agag--aa--gg----g------ag------aaa--ccC------
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585195 32 -   6019432 ATCTAAA-tt------ta-agg-a--agag--aa--ga----g------ag------aaa--ccc------
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3901412 32 -   4330536 ATCTAAA-Tt------ta-agg-a--ggag--aa--ga----g------ag------aaa--ccc------
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        31961 32 +     33610 ATCTAAA-TT------TA-AGG-A--AGAG--AC--GC----G-----------AG-A--AACCT------
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              185695 29 +    196477 ATCTAAA-CT------TA-AAG-G--A--G--AA--GG----A-----------AT-A----AAA-----T
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025128 22 -   3037898 ACCTGAA-TT------TA-AGG-A--A--A--TG--GA----G----------------------------
i Nannospalax_galili.KL204047.1                          C 0 I 2
s Nasalis_larvatus.k141_413338                                9415 25 +     21681 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20298796 22 +  31847680 ATCTAAA-TT------TA-AGG-a--c--a--ag--gg----g----------------------------
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 212
s Neophocaena_asiaeorientalis.KZ687982.1                   5865115 31 +   7148211 ATCTAAA-TT------TA-AGG-A--AGAG--AG--G-----G-----------GG-A---AATA-----C
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    755995 19 +    783361 ATCTAAC-TT------TA-AGG-A--AGAG-----------------------------------------
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 8
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145581 34 -   9404916 ATCTAAA-Tt------ta-agg-a--a--g--gg--ggtgggg-gg-----------agata--c------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102574077 27 - 196305487 aattaaa-tt------ca-aga-a--c--g--gg--gt----a-gg-----------g------t-----a
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             1763 27 +      8486 aattaaa-tt------ca-aga-a--c--g--gg--gt----a-gg-----------g------t-----a
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744505 27 + 199412804 aattaaa-tt------ca-aga-a--g--g--gg--gt----a-gg-----------g------t-----a
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 T 10915
s Octodon_degus.JH651603.1                                  746024 22 +  11899542 ATGTATA-AT------TA-AAG-A--A--G--GG--AG----C----------------------------
i Octodon_degus.JH651603.1                               C 0 I 5
s Odobenus_rosmarus.KB229312.1                              500321 25 -   2017862 ATCTAAA-TT------TA-Agg-a--t--a--ag--gg----g-g----a-------a-------------
i Odobenus_rosmarus.KB229312.1                           C 0 I 8
s Ondatra_zibethicus.OndZib_scaffold_46174                   16618 22 +     28053 ATCTGAA-TT------TA-AGA-A--A--G--GT--TG----G----------------------------
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 2
s Onychomys_torridus.OnyTor_scaffold_2986                    74721 22 +    102263 ATCTGAA-TT------TA-AGA-A--A--G--AG--TG----G----------------------------
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 2
s Orcinus_orca.KB316932.1                                  2781030 31 -  10937097 ATCTAAA-TT------TA-AGG-A--AGAG--AG--G-----G-----------GG-A---AATA-----C
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6418 15 -     18566 ATCTACA-TT------TA-AGA-A-----------------------------------------------
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 I 10
s Oryctolagus_cuniculus.CM000791.1                        67144046 33 + 174332312 atcaaaa-tt------ta-agg-A--G--GGGGT--GA----G------TTGAGA--A------C-----C
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458335 30 -    559221 ATCTAAA-TT------TA-AGG-A--A--G--GG--GG----G-----------GG-A--GGAAC------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Pan_paniscus.KQ411613.1                                    35800 25 +     80009 ATCTAAA-TT------TA-ACA-A--A--G--TG--GG----A--------------G------A-----C
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189136750 25 + 189151597 ATCTAAA-TT------TA-ACA-A--A--G--TG--GG----A--------------G------A-----C
i Pan_troglodytes.CM009242.2                             C 0 N 0
s Panthera_onca.PanOnc_flattened_line_3271                  140211 13 +    230217 ATGTAAA-TT------TA-AG--------------------------------------------------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 20
s Panthera_pardus.KV860321.1                                251740 13 +  18783137 ATGTAAA-tt------ta-ag--------------------------------------------------
i Panthera_pardus.KV860321.1                             C 0 I 20
s Panthera_tigris.KE722367.1                               4710181 13 -   8748460 ATGTAAA-tt------ta-ag--------------------------------------------------
i Panthera_tigris.KE722367.1                             C 0 I 20
s Papio_anubis.CM001495.2                                183436987 25 + 183742232 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------A------A-----C
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1049 25 +     20448 ATCTAAA-TT------TA-ATG-A--A--G--TC--GG----A--------------G------A-----C
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20557671 25 +  20919399 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------A------A-----C
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_4051466                                   1249 25 -      1598 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Papio_kindae.k141_4051466                              C 0 C 0
s Papio_papio.k141_802527                                     3081 25 +     27711 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  3070 25 +      9205 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      1001 25 -     78924 ATGTAAA-TT------TA-ATC-A--A--G--AG--AG----G----------GA--A-------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 4
s Perodicticus_ibeanus.k141_855320                            4255 27 +     13100 aactaaa-tt------ca-aga-a--g--a--gg--gt----a-g----a-------g------t-----a
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             2623 27 +     25941 aactaaa-tT------ca-aga-a--g--a--gg--gt----a-g----a-------g------t-----a
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       24975 22 +     32600 GTGTAAT-TC------TA-AGA-A--G--G--GG--GA----G----------------------------
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 I 2
s Peromyscus_maniculatus.KI615324.1                       18187507 22 -  18517816 ATCTGAA-TT------TA-AGA-A--A--G--GG--TG----G----------------------------
i Peromyscus_maniculatus.KI615324.1                      C 0 I 2
s Petromus_typicus.PetTyp_scaffold_42190                     25484 22 -     29689 GTGTACA-TT------TT-AGG-A--G--G--CG--AG----T----------------------------
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 I 6
s Phocoena_phocoena.PhoPho_flattened_line_24159               8077 31 +     63832 ATCTAAA-TT------TA-AGG-A--AGAG--AG--G-----A-----------GG-A---AATA-----C
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           37930 25 +     62158 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        32659 25 +     89929 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34075 25 +     51399 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290294 25 -  14605196 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_7723             78982 32 +     79650 ATCTAAA-TT------TA-AGA-A--AGAG--AA--GA----G-----------AG-A--AACCC------
i Pipistrellus_pipistrellus.PipPip_scaffold_7723         C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           33789 31 +     35617 ATCTAAA-TT------TA-AGG-A--AGAG--AG--G-----G-----------GG-A---AATA-----C
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189124839 25 + 189387572 ATCTAAA-TT------TA-ACA-A--A--G--TG--GG----A--------------G------A-----C
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9564682 25 +   9816681 ATCTAAA-TT------TA-ACA-A--A--G--TG--GG----A--------------G------A-----C
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               67571 25 -     81375 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9395 25 +     10147 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9559 29 -     22811 ATCTACA-TT------TA-AGG-A--A--G--AC--AA----A-----------AA-G----CAC-----C
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     985620 31 +   2598838 ATCTAAA-TT------TA-AGG-A--A--G--GG--GG---TG------------TGG------A--AACC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          23908 31 +     38485 ATCTAAA-TT------TA-AGG-A--A--G--GG--GG---TG------------TGG------A--AACC
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                               70 31 +      4256 ATCTAAA-TT------TA-AGG-A--A--G--GG--GG---TG------------TGG------A--AACC
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          21428 31 +     35766 ATCTAAA-TT------TA-AGG-A--A--A--GG--GG---TG------------TGG------A--AACC
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1630595                          16707 31 +     17239 ATCTAAA-TT------TA-AGG-A--A--G--GG--GG---TG------------TGG------A--AACC
i Propithecus_perrieri.k141_1630595                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        23422 31 -     67325 ATCTAAA-TT------TA-AGG-A--A--G--GG--GG---TG------------TGG------A--AACC
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_1019028                         13138 31 -     13615 ATCTAAA-TT------TA-AGG-A--A--G--GG--GG---TG------------TGG------A--AACC
i Propithecus_verreauxi.k141_1019028                     C 0 C 0
s Psammomys_obesus.NESX01036370.1                             5505 22 -     21651 ATCTGAA-TT------TA-AGG-A--A--G--GA--TG----G----------------------------
i Psammomys_obesus.NESX01036370.1                        C 0 I 2
s Pteronotus_parnellii.KE909381.1                            10813 30 -     21811 ATCTaaa-tt------ta-aag-a--agag--ga--aa----g--------------aaaa--cc------
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36282 30 +     42204 ATTTAAA-TT------TA-AGG-A--A--G--GC--GG----G----------GA--A--AAACC------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973303 32 +  28871421 ATCTAAA-TT------TA-AGG-A--AGAG--AG--CA----G-----------GG-A--AAACC------
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1239 32 -      8028 ATCTAAA-TT------TA-AGG-A--AGAG--AG--CA----G-----------GG-A--AAACC------
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20262716 13 -  38429054 ATGTAAA-TT------TA-AG--------------------------------------------------
i Puma_concolor.QAVW01001104.1                           C 0 I 20
s Pygathrix_cinerea.k141_1153803                              9399 25 -     91421 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603535 25 +   7812017 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9371 25 -     72585 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr8                                 113028303 22 - 133307652 ATCTGAG-TT------TA-AGG-A--A--G--GG--TA----T----------------------------
i Rattus_norvegicus.chr8                                 I 514 I 39
s Rhinolophus_sinicus.LVEH01000134.1                        366537 32 -   3329780 ATCTAAA-TT------TA-AGA-A--GGAG--AG--TG----G-----------GG-A--AAACC------
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                              785 25 -     11128 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230163 25 - 195417433 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7665871 25 +   7961872 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84285 32 -     96226 ATCTAAA-TT------TA-AGG-A--CGAG--AG--CA----G-----------GG-G--AAACC------
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    150981 34 -    313613 ATTTAAT-TT------TA-AGG-ATTACAC--AG--GG----G------------T-G--GAAAC-----T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          13914 25 -     19888 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21120 25 +     39453 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            1644 25 +     27826 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1164 25 -     19483 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1228 25 +      7198 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9486 25 +     15514 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187293 33 -    191337 ATCTAAA-TC------TA-AGA-A--ACAG--AC--GG----G-----------GG-A--AAACC-----T
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13646662 34 -  18376816 ATCTAAA-TC------TA-AGG-A--ACAG--GA--TA----G----------GA--A-AAGTAA-----T
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1947807 22 -   3870691 ATCTAAA-TT------TA-AGG-A--A--G--AG--GA----G----------------------------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 7
s Spilogale_gracilis.SpiGra_flattened_line_13525             26819 21 +     97271 ATTTAAA-TT------TA-AGA-A--A--A--AC--AA---------------------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 10
s Suricata_suricatta.SurSur_flattened_line_6629               6772 25 -    196729 ATGTAAA-TC------TA-AGA-A--A--G--TG--GG----G----------GA--A-------------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 6
s Sus_scrofa.CM000828.4                                   62881800 32 -  69701581 ATctaca-tt------ta-aag-a--agaa--aa--ga----g------a-----t-aaa---tc-----t
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1087468 25 -   1523678 GTCTAAA-TT------TA-ACA-A--A--C--TG--GG----A--------------G------A-----C
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6426 32 +     41958 ATCTAAA-TT------TA-AGG-A--AGGG--AA--GG----G-----------AG-A--AAACC------
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69055 29 +    116680 ATTTAAA-CT------TA-GAG-G--A--G--AA--GG----G-----------AT-A----AAA-----C
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      114790 32 -    156842 ATCTAAA-TT------TA-AGG-A--AGAA--AG--GG----G-----------AA-A---AAAC-----T
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383253 33 +    539355 ATCTAAA-TT------TA-AGG-A--AGAA--AG--GG----G-----------AA-A--AAAAC-----T
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1598868                                9229 25 -     11412 ATCTAAA-TT------TT-TAA-A--A--G--AG--GA----A--------------A------A-----A
i Tarsius_lariang.k141_1598868                           C 0 C 0
s Tarsius_wallacei.k141_780063                               13949 25 +     25099 ATCTAAA-TT------TT-TAA-A--A--G--AG--GA----A--------------A------A-----A
i Tarsius_wallacei.k141_780063                           C 0 I 5
s Theropithecus_gelada.CM009954.1                        186422496 25 + 186847797 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              102638 22 +    114563 GTGTACA-TT------TA-AGG-A--G--A--CA--GG----T----------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 5
s Tolypeutes_matacus.TolMat_scaffold_228639                   1467 29 +      8208 ATCTAAA-TT------TA-AGG-A--A--G--AA--GT----A-----------AA-A----AAG-----C
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78572 33 +    610378 ATCTAAA-TT------TA-AGG-A--AGAG--AA--GA----G---------AGA--A--AAACC------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          5222 25 -     20410 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9416 25 +     15221 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5322 25 +     19930 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       1750 25 -     19997 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            41870 25 -     60166 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9343 25 -     27529 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9279 25 -     18194 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3018 25 -     21137 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    1718 25 -     10723 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                          874 25 +      9834 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19188 25 +     32220 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933286 25 +   6242583 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2532 25 +     20839 ATCTAAA-TT------TA-ATG-A--A--G--TG--GG----A--------------G------A-----C
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_124071                    498 31 -      2171 ATCTAAA-TT------TA-AGG-A--AGAG--AC--A-----G----------GA--A---AATC-----T
i Tragulus_javanicus.TraJav_scaffold_124071              C 0 C 0
s Trichechus_manatus.JH594705.1                            4291978 28 +  10818551 ATC-ACA-TT------TA-AGG-A--A--G--AG--GA----A-----------AA-A----CCC-----C
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2149183 27 +   4065304 ATCTAAA-TT------TA-AG-TA--A--G--AA--GA----G-----------GG-A------A-----A
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     2806 26 -     10553 ATCTAAA-TT------TA-AG--A--A--G--AA--GA----G-----------GG-A------A-----A
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737277 31 +  33153633 ATCTAAA-TT------TA-AGG-A--AGAG--AG--G-----G-----------GG-A---AATA-----C
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   51112 35 -     77625 ATTTAAA-TT------TA-AGG-ATTACAG--GG--GG----G-----------TT-A--TAAAC-----C
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4846519 29 -   5085361 atataaa-tg------ta-aGA-A--A--G--GG--GG----G-----------GG-A---AAAC------
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                 5367973 32 -   5488506 ATCTAAA-TT------TA-AGG-A--AGAG--TC--GG----G-----------GG-A---AATC-----C
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  6996 30 -     43706 ATCTAAA-TT------TA-AGG-A--A--G--GG--GG----A----------GA--A--GAAAC------
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19312 22 -     24430 ATCTAAA-TT------TA-AGA-G--A--G--TG--AA----G----------------------------
i Xerus_inauris.XerIna_scaffold_48378                    C 0 I 7
s Zalophus_californianus.ZalCal_flattened_line_63728          1451 25 +      2932 ATCTAAA-TT------TA-AGG-A--C--A--AG--GG----G----------GA--A-------------
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 I 7
s Zapus_hudsonius.ZapHud_scaffold_11398                       9615 23 +     63895 ATCTGAA-TT------TA-AGG-A--A--G--TT--GG---GG----------------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 8
s Ziphius_cavirostris.ZipCav_flattened_line_71469            10969 31 +     12536 ATCTAAA-TT------TA-AGG-A--AGAG--AG--G-----G-----------GG-A---AATA-----C
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Saiga_tatarica.SaiTat_scaffold_373180                       3225 222 +      4321 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4576 218 +     55207 I
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Pantholops_hodgsonii.KE114653.1                          1264036 222 -   2937107 I
e Ovis_canadensis.OviCan_scaffold_2572                      173103 222 -    191736 I
e Ovis_aries.CM001607.2                                   17584682 222 +  44047080 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144328 218 +    630418 I
e Ochotona_princeps.JH802162.1                             1355292  2 +   3988456 I
e Moschus_moschiferus.MosMos_scaffold_61429                  27091 222 -     27816 I
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17151 222 +     36099 I
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Elaphurus_davidianus.JRFZ01104969.1                       309953 220 +    607251 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Capra_hircus.CM004588.1                                 18059667 222 -  44709034 I
e Capra_aegagrus.CM003241.1                               18828947 222 +  46296322 I
e Bubalus_bubalis.KI419123.1                               2818124 220 +   4408762 I
e Bos_taurus.CM000203.6                                   18082634 220 +  45695690 I
e Bos_mutus.JH880303.1                                     1124552 224 -   1948126 I
e Bos_indicus.CM003047.1                                  20271996 220 +  48749331 I
e Bison_bison.KN261452.1                                    198791 220 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    25751 222 +     34529 I
e Antilocapra_americana.AntAmePen_scaffold_12469             97280 223 -    100397 I
e Ammotragus_lervia.NIVO01071767.1                          674829 222 -   2318259 I

a score=0.000000
s hg38.chrUn_KI270753v1                                        463 31 +     62944 A-----T---C------------AAG---A------GTA----ACTAAC-----TG-T----C-----AATGAGC----TTGA
s Acinonyx_jubatus.LLWD01001279.1                           816600 14 -   1699592 -------------------------------------------------------A-T----C-----AGTGGGC----TTAA
i Acinonyx_jubatus.LLWD01001279.1                        I 20 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     66347 27 +     87051 A-----C---T------------AAA---G------AC--------ACT-----TG-C----T-----GGTAGCC----TTCA
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 2 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506548 27 -  29979442 a-----C---C------------AAA---G------G--------TGAT-----TG-T----C-----AGTGGGC----TTGA
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             74839 27 -    347723 t-----c---c------------aaa---G------G--------TGAT-----TG-T----C-----AGTGGGC----ATGA
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64657  5 -     89534 --------------------------------------------------------------------------C----TTGA
i Allactaga_bullata.AllBul_scaffold_9566                 I 17 C 0
s Allenopithecus_nigroviridis.k141_3361533                    8936 31 -     52922 A-----C---C------------AAG---A------GTA----ACTAAC-----CG-T----C-----AGTGGGC----TTCA
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          8861 31 -     28001 A-----C---C------------AAG---A------GTA----ACTAAC-----CG-T----C-----AGTGGGC----TTCA
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           8987 31 -      9772 A-----C---C------------AAG---A------GTA----ACTAAC-----CG-T----C-----AGTGGGT----TTCA
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            144 31 -     12518 A-----C---C------------AAG---A------GTA----ACTAAC-----CG-T----C-----AGTGGGT----TTCA
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      182748 30 +    412891 A-----C---C------------GAG---G---TAAT--------TAAT-----TG-T----C-----AATGGGC----TTGA
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       6872 34 +     20879 A-----CTCGC------------GAG---G------GCA----ACTCAT-----TG-T----C-----TATGGAC----TTGC
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 7 C 0
s Arctocebus_calabarensis.k141_288239                        14052 37 +     17124 G-----T---A------------GGG---G------TTT----AGTAAG-----TT-T----CCACATAATGAGCGCAAT---
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2100 30 +     43469 A-----C---C------------AAG---G---TAAT--------TAAT-----TG-T----C-----AGTGGGC----TTGA
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  48921 31 -     92717 A-----C---C------------AAG---G------GTA----ACTAAT-----TG-T----C-----AGTGGGC----TTGA
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              49546 31 +     85213 A-----C---C------------AAG---G------GTA----ACTAAT-----TG-T----C-----AGTGGGC----TTGA
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191164 30 +  23207421 A-----C---C------------AAG---G--GTAAT--------TAAT-----TG-T----C-----AG-GGGC----TTGA
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         1630 30 -     18090 A-----C---C------------AAG---G--GTAAT--------TAAT-----TG-T----C-----AG-GGGC----TTGA
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998516 31 -  17673402 A-----C---C------------GAG---G--GTAAT--------TAAT-----TG-T----C-----AGCGggc----ttga
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2330980 31 -   7040546 A-----C---C------------GAG---G--GTAAT--------TAAT-----TG-T----C-----AGCGggc----ttga
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399256 31 -   1652518 A-----C---C------------GAG---G--GTAAT--------TAAT-----TG-T----C-----AGCGggc----ttga
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795403 27 -  60362399 A-----C---C------------AAG---G------A--------TGAT-----TG-T----C-----GGTGGTC----TTGA
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181459 27 -    185531 A-----C---C------------AAG---G------A--------TGAT-----TG-T----C-----GGTGGTC----TTGA
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9030846 27 -   9314153 A-----C---C------------AAG---G------A--------TGAT-----TG-T----C-----GGTGGTC----TTGA
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955110 27 -  59632846 A-----C---C------------AAG---G------A--------TGAT-----TG-T----C-----GGTGGTC----TTGA
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496414 27 +  63665305 A-----C---C------------AAG---G------A--------TGAT-----TG-T----C-----GATGGTC----TTGA
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                     576 31 -     12242 A-----C---C------------AGA---G------GTA----GCTAAT-----TG-T----C-----TGTGGGC----TTGA
i Capromys_pilorides.CapPil_scaffold_65020               I 5 I 2
s Carlito_syrichta.NW_007259797.1                           140363 36 -    496798 aaataat---c------------aag---a------gta----ACTAAT-----TG-T----C-----AGTGGGC----TTAA
i Carlito_syrichta.NW_007259797.1                        C 0 I 284
s Carollia_perspicillata.CarPer_scaffold_92756                2518 30 -     11696 A-----C---C------------GAG---G---TAAT--------TAAT-----TG-T----C-----AGGGGGC----TTGA
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133276 31 +    179628 A-----C---C------------AAG---G------GTA----AATTGT-----TG-T----C-----AGTGGAC----TTGA
i Castor_canadensis.CasCan_scaffold_2074                 I 2 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     88330 31 +    217609 A-----C---C------------AAG---G--CTAAT--------GAAT-----TG-T----C-----AGTAGGC----TTGA
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18347111 31 -  23392119 G-----C---C------------AGG---G------ATA----ATTAAT-----TG-T----C-----TGTGGgc----ataa
i Cavia_aperea.AVPZ01000300.1                            I 5 C 0
s Cavia_porcellus.DS562891.1                              18359371 31 -  23407841 G-----C---C------------AGG---G------ATA----ATTAAT-----TG-T----C-----TGTGGgc----ataa
i Cavia_porcellus.DS562891.1                             I 5 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98246 31 +    143979 G-----C---C------------AGG---G------ATA----ATTAGT-----TG-T----C-----TGTGGGC----ATGA
i Cavia_tschudii.CavTsc_scaffold_8919                    I 5 C 0
s Cephalopachus_bancanus.k141_2037105                         4281 36 -      8605 AAATAAT---C------------AAG---A------GTA----ACTAAT-----TT-T----C-----AGTGGGC----TTAA
i Cephalopachus_bancanus.k141_2037105                    C 0 I 284
s Ceratotherium_simum.JH767749.1                          12227491 31 +  27778364 a-----C---C------------AAG---G--GTAAC--------TAAT-----CG-T----C-----AGTGGGC----TTGA
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2209 31 -      3715 A-----C---C------------AAG---G--GTAAC--------TAAT-----CG-T----C-----AGTGGGC----TTGA
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4469905 31 +   4669795 A-----C---C------------AAG---A------GTA----ACTAAC-----CG-T----C-----AGTGGGC----TTCA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8454 31 -     19203 A-----C---C------------AAG---A------GTA----ACTAAC-----CG-T----C-----AGTGGGC----TTCA
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           2873 31 +      8260 A-----C---C------------AAG---A------GTA----ACTAAC-----CG-T----C-----AGTGGGC----TTCA
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3103 31 +     27781 A-----C---C------------AAG---A------GTA----ACTAAC-----CG-T----C-----AGTGGGC----TTCA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3249 31 -     20310 A-----C---C------------AAG---A------GTA----ACTAAC-----CG-T----C-----AGTGGGC----TTCA
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6233 31 +     29689 A-----C---C------------AAG---A------GTA----ACTAAC-----CG-T----C-----AGTGGGC----TTCA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             586 31 +      9989 A-----C---C------------AAG---A------GTA----ACTAAC-----CA-T----C-----AGTGGGC----TTCA
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           8921 31 -     27936 A-----C---C------------AAG---A------GTA----ACTAAC-----CG-T----C-----AGTGGGC----TTCA
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             8940 31 -     11289 A-----C---C------------AAG---A------GTA----ACTAAC-----CG-T----C-----AGTGGGC----TTCA
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811316 31 +  39242232 A-----C---C------------AAG---A------GTA----ACTAAC-----CG-T----C-----AGTGGGC----TTCA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217007 31 -  21565898 A-----C---C------------AAG---A------GTA----ACTAAC-----CA-T----C-----AGTGGGC----TTCA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34127 31 -     53127 A-----C---C------------AAG---A------GTA----ACTAAC-----CG-T----C-----AGTGGGC----TTCA
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1419 31 +      7159 A-----C---C------------AAG---A------GTA----ACTAAC-----CG-T----C-----AGTGGGC----TTCA
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        8932 31 -     27947 A-----C---C------------AAG---A------GTA----ACTAAC-----CG-T----C-----AGTGGGC----TTCA
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          8908 31 +     17596 A-----C---C------------AAG---A------GTA----ACTAAC-----CG-T----C-----AGTGGGC----TTCA
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39402 31 -     41420 A-----C---C------------AAG---A------GTA----ACTAAC-----CG-T----C-----AGTGGGC----TTCA
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4429 31 -      6351 A-----C---C------------AAG---G------GTC----ACTAAT-----TG-T----C-----GGTGGGT----TTAA
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16345 31 -     52598 A-----C---C------------AAG---G------GTA----ACTAAT-----TG-T----C-----AGTGGGC----TTGA
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           11694 31 +     57038 A-----C---C------------AAG---G------GTA----ACTAAT-----TG-T----C-----AGTGGGC----TTGA
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1248145 17 +   2543920 G-----T---C------------AGG---G------ATA----ATTAAT-----T----------------------------
i Chinchilla_lanigera.JH722012.1                         I 5 I 10
s Chlorocebus_aethiops.ctg25                              18422871 31 -  18827391 A-----C---C------------AAG---A------GTA----ACTAAC-----CG-T----C-----AGTGGGC----TTCA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9314 31 -     50209 A-----C---C------------AAG---A------GTA----ACTAAC-----CG-T----C-----AGTGGGC----TTCA
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416319 31 + 135778131 A-----C---C------------AAG---A------GTA----ACTAAC-----CA-T----C-----AGTGGGC----TTCA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 14762 31 +     19366 A-----C---C------------AAG---G------GTA----ACTAAT-----TG-T----C-----AGTGGGC----TTGA
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            169857 31 +    839153 A-----C---C------------AAG---G------GTA----ACTAAT-----TG-T----C-----AGTGGGC----TTGA
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_172426               8858 30 -     10935 A-----C---C------------AAG---G------GTA----ATTATT-----TC-T----C-----AATAGC-----TTGA
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          C 0 C 0
s Colobus_angolensis.KN981557.1                            1904839 31 +   2368649 A-----C---C------------AGG---A------GTA----ACTAAC-----CG-T----C-----ACTGGGC----TTCA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944457 31 + 200372422 A-----C---C------------AGG---A------GTA----ACTAAC-----CG-T----C-----ACTGGGC----TTCA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31351 31 +     84244 A-----C---C------------AGG---A------GTA----ACTAAC-----CA-T----C-----AATGGGC----TTCA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545614 17 -  53390261 -----------------------------------------------AC-----TG-T----C-----AGTGGAC----TTGA
i Condylura_cristata.JH655891.1                          I 10 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10146 31 -     20389 A-----C---C------------AAG--AG---TAAT--------TAAT-----TG-T----C-----AGTAGAC----TTGA
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 17 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 46591 27 +     63868 A-----C---T------------AAA---G------AC--------AAC-----TG-C----T-----AGTAGCC----TTGA
i Cricetomys_gambianus.CriGam_scaffold_18520             I 2 C 0
s Cricetulus_griseus.LT883664.1                           11663577 27 + 224834208 A-----C---T------------AAA---G------AC--------AAT-----TG-C----T-----AGTAGCC----TTGA
i Cricetulus_griseus.LT883664.1                          I 2 C 0
s Crocidura_indochinensis.CroInd_scaffold_603213               744 27 +      1923 A-----T---T------------AAG---A------T--------TAAT-----TA-T----C-----CATGGAA----TTGA
i Crocidura_indochinensis.CroInd_scaffold_603213         C 0 I 9
s Cryptoprocta_ferox.CryFer_flattened_line_16129             17606 27 -     87169 A-----C---C------------AAG---T------A--------TGAT-----TG-T----C-----AGTGGGC----TTGA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 6 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35015 31 +     51376 G-----C---C------------AGA---G------GTA----ATTAAT-----TG-T----C-----TGTCGGc----ttga
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 5 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2504 13 +      5455 ---------------------------------------------------------T----C-----TGTGGGC----TTGA
i Cuniculus_paca.CunPac_flattened_line_231100            I 19 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793             879 31 +      3576 G-----C---C------------AGG---G------ATA----ACTAAT-----TG-T----C-----TGTGGGC----TTGA
i Dasyprocta_punctata.DasPun_flattened_line_206793       I 5 C 0
s Dasypus_novemcinctus.JH564415.1                            60676 31 +   2246927 a-----C---C------------AAG---G------ATC----ACTAAT-----TG-T----C-----AACCAGC----TTGG
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532521 31 -  12879189 A-----C---C------------AAG---G------ATA----ACTAAT-----TG-T----C-----AGTGGGC----TTGA
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16810800 30 +  35494412 A-----C---C------------AAG---G--GTAAT--------TAAT-----TG-T----C-----AG-GGGC----TTGA
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8627549 30 +  20541912 a-----c---C------------GAG---G---TAAT--------TAAT-----TG-T----C-----AGTGGGC----TTGA
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669023 31 +   1390856 a-----C---C------------AAG---G--GTAAT--------TAAT-----CG-G----C-----AGTGGGC----TTGA
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2098 31 +    198055 A-----C---C------------AAG---G--GTAAC--------TGAT-----CG-T----C-----AGTGGGC----TTGA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    33938 31 +     67921 G-----C---C------------AGG---G------ATA----ACTAAT-----TG-T----C-----TGTGGGC----TTGA
i Dinomys_branickii.DinBra_scaffold_21862                I 5 C 0
s Dipodomys_ordii.KN672350.1                              18895447 31 +  37912305 A-----T---C------------TAG---G------ATA----AATAAT-----TG-T----C-----AGTGGGC----TTGA
i Dipodomys_ordii.KN672350.1                             I 2 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  11656 31 +     14536 A-----T---C------------TAG---G------ATA----AATAAT-----TG-T----C-----AGTGGGC----CTGA
i Dipodomys_stephensi.DipSte_scaffold_75855              I 2 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31132 31 -     42551 G-----C---C------------AGG---G------ATA----ATTAAT-----TG-T----C-----TGTGGGC----GTGA
i Dolichotis_patagonum.DolPat_scaffold_30833             I 5 C 0
s Eidolon_helvum.KE759718.1                                   7062 31 +     11740 A-----C---C------------AAGG--G---TAAT--------TAAT-----TG-T----C-----AGTACTC----TTAA
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1088626 31 +  10337057 A-----C---C------------AAG---G------ACA----ACTAAT-----TC-T----C-----AATGGac----ttga
i Elephantulus_edwardii.JH947257.1                       I 15 C 0
s Ellobius_lutescens.LOEQ01008920.1                          12384 27 -    110024 A-----C---T------------AAA---T------AC--------AAT-----TC-C----T-----AGTTGCC----TTGA
i Ellobius_lutescens.LOEQ01008920.1                      I 2 C 0
s Ellobius_talpinus.LOJH01123422.1                            3334 27 +      5358 A-----C---T------------AAA---T------AC--------AAT-----TC-C----T-----AGTTGCC----TTGA
i Ellobius_talpinus.LOJH01123422.1                       I 2 C 0
s Enhydra_lutris.KZ291758.1                               16325404 27 -  41312741 T-----C---C------------AAA---G------G--------TGAT-----TG-T----C-----AGTGGGT----ATGA
i Enhydra_lutris.KZ291758.1                              I 5 C 0
s Eptesicus_fuscus.JH977646.1                              2143399 30 -  14770903 G-----C---C------------AAG---G---TAAT--------TAAT-----TG-T----C-----AGTGGGC----TTGA
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279365 31 +   4378816 a-----c---c------------aag---g--GTAAT--------TAAT-----TG-C----C-----TGTGAAC----Ttga
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527186 31 -  39960074 a-----c---c------------aaG---G--GTAAT--------TAAT-----TG-C----C-----TGTGAAC----Ttga
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29201 31 +    498745 a-----c---c------------aag---G--GTAAT--------TAAT-----TG-C----C-----TGTGAAC----ttga
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3320415 31 -   7059049 T-----T---C------------AAG---A------G--------TAAC-----TA-TTCATC-----AGTGGGA----TTag
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21199554 27 -  21539334 A-----C---C------------AAG---A------GTA----AC---------CA-T----C-----AGTGGGC----TTCA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10476 30 +    133382 A-----C---C------------AAG---G--GTAAT--------TAAT-----TG-T----C-----AG-GGGC----TTGA
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24414 30 -     44125 A-----C---C------------AAG---G--GTAAT--------TAAT-----TG-T----C-----AG-GGGC----TTGA
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.KN305074.1                                       264 14 -      2052 -------------------------------------------------------A-T----C-----AGTGGGC----TTAA
i Felis_catus.KN305074.1                                 I 20 C 0
s Felis_catus_fca126.CM031415.1                           20185030 14 + 205367284 -------------------------------------------------------A-T----C-----AGTGGGC----TTAA
i Felis_catus_fca126.CM031415.1                          I 20 C 0
s Felis_nigripes.FelNig_flattened_line_125938                10144 14 -     11347 -------------------------------------------------------A-T----C-----AGTGGGC----TTAA
i Felis_nigripes.FelNig_flattened_line_125938            I 20 C 0
s Fukomys_damarensis.KN121974.1                             848155 36 +   3816255 C-----C---C------------AGG---G------ATG----GCTAATGGGCTTG-T----C-----TATGGGc----ttga
i Fukomys_damarensis.KN121974.1                          I 5 I 1
s Galagoides_demidoff.k141_31856                              2552 31 -      3432 A-----A---T------------AAG---G------ATA----ACTAAT-----TG-A----C-----AGTGGGT----TTGA
i Galagoides_demidoff.k141_31856                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25064 31 +     26054 A-----C---C------------AAG---A------GTA----ACTAAT-----TG-T----C-----AGTGGGC----ATGA
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            29989 31 +     49224 A-----T---C------------AAG---G------GTA----ACTAAT-----TT-T----C-----AGTGGGC----TTGA
i Glis_glis.GliGli_scaffold_19807                        I 7 C 0
s Gorilla_beringei.k141_2022027                               1111 31 +      3305 A-----T---C------------AAG---A------GTA----ACTAAC-----TG-T----C-----AGTGAGC----TTGA
i Gorilla_beringei.k141_2022027                          I 58 I 40
s Gorilla_gorilla.CYUI03002401.1                              5333 31 +      7071 A-----T---C------------AAG---A------GTA----ACTAAC-----TG-T----C-----AGTGAGC----TTGA
i Gorilla_gorilla.CYUI03002401.1                         I 58 I 40
s Graphiurus_murinus.GraMur_scaffold_10447                   29711 30 +     78134 A-----T---C------------ACG---G------GTA----ACTAAT-----TG-T----C-----AGTG-GC----TTAA
i Graphiurus_murinus.GraMur_scaffold_10447               I 7 C 0
s Helogale_parvula.HelPar_flattened_line_2585               230788 27 +    327341 A-----C---C------------AAG---T------A--------TGAT-----TG-T----C-----AGTGGGC----TTAA
i Helogale_parvula.HelPar_flattened_line_2585            I 6 C 0
s Heterocephalus_glaber.JH602082.1                        20659043 18 +  22651954 G-----T---C------------AGG---G------ATA----GCTAAT-----TG---------------------------
i Heterocephalus_glaber.JH602082.1                       I 5 I 9
s Heterohyrax_brucei.HetBruBak_scaffold_173205                2980 31 -      3357 A-----C---C------------AAG---C------ATA----ACCAAT-----TC-T----C-----AACGGAC----TGGA
i Heterohyrax_brucei.HetBruBak_scaffold_173205           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111655 31 +    128679 A-----C---C------------AGG---G--GTAAT--------TAAT-----TG-T----C-----AGAGGGC----ATGA
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108021 31 +   1711038 A-----C---C------------AAGG--G---TAAT--------TAAT-----TG-T----C-----AGTAGAC----TTGA
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39460 31 +     43066 A-----C---C------------AAGG--G---TAAT--------TAAT-----TG-T----C-----AGTAGAC----TTGA
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    428888 31 +    630532 A-----T---C------------AAG---A------GTA----ACTAAC-----TG-T----C-----AGTGGGC----TTGA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  32888 27 +     55795 A-----G---C------------AAG---T------A--------TGAC-----TA-C----C-----AGTGGGC----TTGA
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 4 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19490 31 -    143317 A-----C---C------------AGG---G------ATA----ATTAAT-----TG-T----C-----TGTGGGC----ATGA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 5 C 0
s Hylobates_agilis.k141_307679                               11806 31 -     15490 A-----T---C------------AAG---A------GTA----ACTAAC-----TG-T----C-----AGTGGGC----TTGA
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              53811 31 +     67168 A-----T---C------------AAA---A------GTA----ACTAAC-----TG-T----C-----AGTGGGC----TTGA
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189537258 31 - 191637585 A-----T---C------------AAG---A------GTA----ACTAAC-----TG-T----C-----AGTGGGC----TTGA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3330356 31 -  11177569 A-----T---C------------AAG---A------GTA----ACTAAC-----TG-T----C-----AGTGGGC----TTGA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80583 31 +    135385 G-----C---C------------AAG---G------ATA----AATAAC-----TG-T----C-----TGTGGGC----TTGA
i Hystrix_cristata.HysCri_scaffold_5660                  I 6 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514192 32 -   7955117 A-----C---C------------AAG---A------GCA-A--ACTTAT-----TG-T----C-----AGTggac----ttga
i Ictidomys_tridecemlineatus.JH393364.1                  I 3 C 0
s Indri_indri.k141_3655594                                   17778 31 +     31101 A-----C---C------------AAG---G------GTA----ACCAAT-----TG-T----C-----AGTGGGC----TTGA
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22017 30 +     23964 A-----C---C------------AAG---G--GTAAT--------TAAT-----TG-T----C-----AG-GGGC----TTGA
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271019  5 -   9596543 --------------------------------------------------------------------------C----TTGA
i Jaculus_jaculus.JH725527.1                             I 17 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1284 30 -      3359 A-----T---C------------AAG---G--GTAAT--------TAAT-----TG-T----C-----AG-GGTC----TTGA
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    11538 30 -     42476 G-----C---C------------AAG---G---TAAT--------TAAT-----TG-T----C-----TGTGGGC----TTGA
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6401 31 -     23766 A-----T---C------------AAG---G------GCA----ACTAAT-----TG-T----G-----AGTGGGC----TTGA
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24348 31 +     45836 A-----T---C------------AAG---G------GCA----ACTAAT-----TG-T----G-----AGTGGGC----TTGA
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31258 31 -     32627 A-----T---C------------AAG---G------GCA----ACTAAT-----TG-T----G-----AGTGGGC----TTGA
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      22406 31 +     54090 A-----T---C------------AAG---G------GCA----ACTAAT-----TG-T----G-----AGTGGGC----TTGA
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3035716 49 +   3914936 taa-gga---caaggggaaaaaaaaa---accaaagg--------tgAC-----TC-T----C-----AGTGGGC----TTGA
i Leptonychotes_weddellii.KB714746.1                     N 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     3225 27 -     14121 A-----T---C------------AAG---G------ATG----AC---------TC-T----T-----AGTGGGC----ATGA
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             267098 30 -    662738 A-----C---C------------AAG---G--GTAAT--------TAAT-----TG-T----C-----AG-GGGC----TTGA
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1431072 31 +   1826925 A-----C---C------------AAG---A------GTA----ACTAAC-----CG-T----C-----AGTGGGC----TTCA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             300 40 +     11245 g-----g---a------------ggg---g------gtt----agtaag-----tt-t----ccacctaatgggcacaatgtg
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999135 40 +   6120653 g-----g---a------------ggg---a------gtt----agtaag-----tt-t----ccacctaatgggcacaatgtg
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214099 31 -  43346337 A-----G---C------------AAG---G------GTA----ACTAAT-----TC-T----C-----AATGGGC----TTGA
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951350 27 -  59628241 A-----C---C------------AAG---G------A--------TGAT-----TG-T----C-----GGTGGTC----TTGA
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               1260 31 +     40492 A-----C---C------------AAG---A------GTA----ACTAAC-----CG-T----C-----AGTGGGC----TTCA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670520 31 +  60120075 A-----C---C------------AAG---A------GTA----ACTAAC-----CG-T----C-----AGTGGGC----TTCA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7018 31 -     26193 A-----C---C------------AAG---A------GTA----ACTAAC-----CG-T----C-----AGCGGGC----TTCA
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            74809 31 -    114318 A-----C---C------------AAG---A------GTA----ACTAAC-----CG-T----C-----AGTGGGC----TTCA
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   531 31 -     23192 A-----C---C------------AAG---A------GTA----ACTAAC-----CG-T----C-----AGTGGGC----TTCA
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                 9980 31 -     29190 A-----C---C------------AAG---A------GTA----ACTAAC-----TG-T----C-----AGTGGGC----TTCA
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18551 31 +     37952 A-----C---C------------AAG---A------GTA----ACTAAC-----CG-T----C-----AGTGGGC----TTCA
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833639 31 + 187317192 A-----C---C------------AAG---A------GTA----ACTAAC-----CG-T----C-----AGTGGGC----TTCA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452197 31 -  25927173 A-----C---C------------AAG---A------GTA----ACTAAC-----CG-T----C-----AGTGGGC----TTCA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74400 31 +     89720 A-----C---C------------AAG---A------GTA----ACTAAC-----CG-T----C-----AGTGGGC----TTCA
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1397 31 +     20474 A-----C---C------------AAG---A------GTA----ACTAAC-----CG-T----C-----AGTGGGC----TTCA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1198 31 -     14993 A-----C---C------------AAG---A------GTA----ACAAAC-----CG-T----C-----AGTGGGC----TTCA
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  323830 31 -    668171 A-----C---C------------AAG---A------GTA----ACTAAC-----CG-T----C-----AGTGGGC----TTCA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15340 31 -     15935 A-----C---C------------AAG---A------GTA----ACTAAC-----CG-T----C-----AGTGGGC----TTCA
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20136 31 -     45290 A-----C---C------------AAG---A------GTA----ACTAAC-----CG-T----C-----AGTGGGC----TTCA
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87204 31 +     94391 A-----C---C------------AAGG--G---TAAT--------TAAT-----TG-T----C-----AGTACTC----TTAA
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23931690 31 -  24302211 A-----C---C------------AAG---A------GTA----ACTAAC-----CG-T----C-----AGGGGGC----TTCA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               345870 31 +    752769 A-----C---C------------AAG---A------GTA----ACTAAC-----CG-T----C-----AGGGGGC----TTCA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15228 15 +    737560 A-----T---C------------AAA---G------A--------TAAT-----TG-T-------------------------
i Manis_javanica.JSZB01003497.1                          C 0 I 8
s Manis_pentadactyla.KN006162.1                              46618 15 -    317179 A-----T---C------------AAA---G------G--------TAAT-----TG-T-------------------------
i Manis_pentadactyla.KN006162.1                          C 0 I 8
s Marmota_marmota.CZRN01000018.1                          33097050 31 -  40650429 A-----C---C------------AAG---A------GCA----ACTCAT-----TG-T----C-----AGTGgac----ttga
i Marmota_marmota.CZRN01000018.1                         I 7 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6467 31 -    207569 A-----C---C------------AAC--AG---TAAT--------TAAT-----TG-T----C-----AGTGGAC----TTGA
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              5644 27 +     13704 T-----C---C------------AAA---G------G--------TGAT-----TG-T----C-----AGCAGGC----ATGA
i Mellivora_capensis.MelCap_flattened_line_69365         I 6 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 27895 24 +    140813 A-----C---T------------AAA---G------AC--------AAT-----TG-C----A-----GGTAGCA----T---
i Meriones_unguiculatus.MerUng_scaffold_7390             I 2 C 0
s Mesocricetus_auratus.KB708134.1                         12177924 27 -  29670104 A-----C---T------------AAA---G------AC--------AAT-----TG-C----T-----AGGAGCC----TTGA
i Mesocricetus_auratus.KB708134.1                        I 2 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    2685 30 +     10310 A-----C---C------------AAG---G--GTAAT--------TAAC-----TG-T----C-----AG-GGGC----TTGA
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18282933 32 -  93316391 A-----C---A------------AAG---G------GTA----ACTAAT-----TTCT----C-----AGAGGGC----TTGA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    15087 26 -    145209 A-----G---T------------CAG---G------GT--------ATT-----TC-T----C-----TATAGT-----TTAA
i Microgale_talazaci.MicTal_scaffold_6613                I 13 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13060 30 -     19307 A-----C---C------------AAG---G---TAAT--------TAAT-----TG-T----C-----AGTGGGC----TTGC
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 12 C 0
s Microtus_ochrogaster.CM001695.1                         11256302 27 -  27267610 A-----C---T------------AAA---C------AC--------AAT-----TA-C----T-----AGTTGCC----TTGA
i Microtus_ochrogaster.CM001695.1                        I 2 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1848490 30 +   8254450 g-----c---c------------AAG---G---TAAT--------TAAT-----TG-T----C-----AGTGGGC----TTGA
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32359 30 +     64694 G-----C---C------------AAG---G---TAAT--------TAAT-----TG-T----C-----AGTGGGC----TTGA
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3427 31 -     28506 A-----C---C------------AAG---A------GTA----ACTAAC-----CA-T----C-----AGTGGGC----TTCA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62047 48 -     63350 T-AAGGA---C-AAGGGGAAAAAAAA---ACCAAAGG--------TGAC-----TC-T----C-----AGTGGGC----TTGC
i Mirounga_angustirostris.MirAng_flattened_line_22144    I 220 C 0
s Mirza_zaza.k141_952172                                      4294 32 -     37649 A-----C---A------------AAG---G------GTA----ACTAAT-----TTCT----C-----AGAGGGC----TTGA
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26190 30 -    437263 A-----C---C------------AAG---G--GTAAT--------TAAT-----TG-T----C-----AG-GGGC----TTGA
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137463 32 -    366855 A-----C---C------------AAG---G-TAAAAT--------TAAT-----TG-T----C-----AGTGGGC----TTGA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   23967 27 +     37127 A-----C---C------------AAG---T------A--------TGAT-----TG-T----C-----AGGGGGC----TTAA
i Mungos_mungo.MunMun_flattened_line_23663               I 6 C 0
s Murina_feae.MurFea_scaffold_85699                           4548 30 +     14753 G-----C---C------------AAG---G---TAAT--------TAAT-----TG-T----C-----AGTGAGC----TTGA
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              1980 31 +     14296 A-----T---C------------ATG---G------GTA----ACTAAT-----TG-T----C-----AGTGAGC----TTGA
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 7 C 0
s Mustela_putorius.JH418006.1                               297291 27 -  14710649 t-----C---C------------AAA---G------G--------TGAT-----TG-T----C-----AGTGGGC----ATGA
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     70759 34 -     80779 G-----T---C------------AGAGGAG------GTA----GTTAAT-----TG-T----C-----TATGGGC----TTGA
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 5 I 2
s Myotis_brandtii.KE162005.1                                277656 30 -  10118263 G-----C---C------------AAG---G---TAAT--------TAAT-----TG-T----C-----AGTGGGC----TTGA
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585227 30 -   6019432 g-----C---C------------AAG---G---TAAT--------TAAT-----TG-T----C-----AGTGGGC----TTGA
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3901444 30 -   4330536 G-----C---C------------AAG---G---TAAT--------TAAT-----TG-T----C-----AGTGGGC----TTGA
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        31993 30 +     33610 G-----C---C------------AAG---G---TAAT--------TAAT-----TG-T----C-----AGTGGGC----TTGA
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              185724 31 +    196477 A-----C---C------------AAT---G------GGA----ACTAAT-----CG-T----C-----AGTAGGT----ATGA
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025152 21 -   3037898 A-----C---C------------AAA---G------GC--------AAC-----TG-T----T-----AC----------TGA
i Nannospalax_galili.KL204047.1                          I 2 C 0
s Nasalis_larvatus.k141_413338                                9440 31 +     21681 A-----C---C------------AGG---A------GTA----ACTAAC-----TG-T----C-----AGTGGGC----TTCA
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20299030  7 +  31847680 tga-ggg---c------------------------------------------------------------------------
i Neomonachus_schauinslandi.NINY01007730.1               I 212 I 6819
s Neophocaena_asiaeorientalis.KZ687982.1                   5865146 30 +   7148211 A-----C---C------------AAG---G--GTAAT--------TAAT-----TG-T----C-----AG-GGGC----TTGA
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756022 30 +    783361 A-----T---T------------AAG---G---TCAT--------TCAT-----TA-T----C-----AGTAGGC----TTGA
i Noctilio_leporinus.NocLep_scaffold_251                 I 8 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145615 27 -   9404916 A-----C---C------------AAG---G------A--------TGAT-----TG-T----C-----AGTGGTC----GTGA
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102574104 40 - 196305487 g-----g---a------------ggg---g------gtt----agtaag-----tt-t----ccacctaatgggcgcaatgta
i Nycticebus_bengalensis.LG01                            C 0 T 4520
s Nycticebus_coucang.k141_5327727                             1790 40 +      8486 g-----g---a------------ggg---g------gtt----agtaag-----tt-t----ccacctaatgggcgcaatgta
i Nycticebus_coucang.k141_5327727                        C 0 I 14
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105733617 34 + 199412804 G-----A---A---------AATAAG---G------ATA----ACTAAT-----TG-G----C-----AGTGGGC----TTGA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       T 10915 C 0
s Octodon_degus.JH651603.1                                  746051 31 +  11899542 G-----C---T------------AGA---G------GTA----ACTAAT-----TG-T----C-----TGTGGAC----NNNN
i Octodon_degus.JH651603.1                               I 5 C 0
s Odobenus_rosmarus.KB229312.1                              500354 26 -   2017862 ------a---c------------aaa---g------g--------tgac-----TG-T----C-----ATTGGGC----TTGA
i Odobenus_rosmarus.KB229312.1                           I 8 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   16642 27 +     28053 A-----T---T------------AAA---C------AC--------AAT-----TC-C----T-----AGTTGCC----TTGA
i Ondatra_zibethicus.OndZib_scaffold_46174               I 2 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    74745 27 +    102263 A-----C---T------------AAA---G------AC--------AAT-----TG-C----T-----AGTAGCC----TTGA
i Onychomys_torridus.OnyTor_scaffold_2986                I 2 C 0
s Orcinus_orca.KB316932.1                                  2781061 30 -  10937097 A-----C---C------------AAG---G--GTAAT--------TAAT-----TA-T----C-----AG-GGGC----TTGA
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6443 31 -     18566 A-----T---T------------AAG---A------GTA----ACTAAT-----TC-T----C-----AATGGCC----TTAA
i Orycteropus_afer.OryAfe_flattened_line_144387          I 10 C 0
s Oryctolagus_cuniculus.CM000791.1                        67144079 27 + 174332312 A-----T---C------------AAG---G------ATA----AC---------TG-T----T-----AGCAGGC----TTGA
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458365 27 -    559221 A-----C---C------------AAG---G------A--------TGAT-----TG-T----C-----AGTGGTC----TTGA
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Pan_paniscus.KQ411613.1                                    35825 31 +     80009 A-----T---C------------AAG---A------GTA----ACTAAG-----TG-T----C-----AGTGAGC----TTGA
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             187569814 31 + 189151597 A-----T---C------------AAG---A------GTA----ACTAAG-----TG-T----C-----AGTGAGC----TTGA
i Pan_troglodytes.CM009242.2                             N 0 N 0
s Panthera_onca.PanOnc_flattened_line_3271                  140244 14 +    230217 -------------------------------------------------------A-T----C-----AGTGGGC----TTAA
i Panthera_onca.PanOnc_flattened_line_3271               I 20 C 0
s Panthera_pardus.KV860321.1                                251773 14 +  18783137 -------------------------------------------------------A-T----C-----AGTGGGC----TTAA
i Panthera_pardus.KV860321.1                             I 20 C 0
s Panthera_tigris.KE722367.1                               4710214 14 -   8748460 -------------------------------------------------------A-T----C-----AGTGGGC----TTAA
i Panthera_tigris.KE722367.1                             I 20 C 0
s Papio_anubis.CM001495.2                                183437012 31 + 183742232 A-----C---C------------AAG---A------GTA----ACTAAC-----CG-T----C-----AGTGGGC----TTCA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1074 31 +     20448 A-----C---C------------AAG---A------GTA----ACTAAC-----CG-T----C-----AGTGGGC----TTCA
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20557696 31 +  20919399 A-----C---C------------AAG---A------GTA----ACTAAC-----CG-T----C-----AGTGGGC----TTCA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_4051466                                   1274 31 -      1598 A-----C---C------------AAG---A------GTA----ACTAAC-----CG-T----C-----AGTGGGC----TTCA
i Papio_kindae.k141_4051466                              C 0 C 0
s Papio_papio.k141_802527                                     3106 31 +     27711 A-----C---C------------AAG---A------GTA----ACTAAC-----CG-T----C-----AGTGGGC----TTCA
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  3095 31 +      9205 A-----C---C------------AAG---A------GTA----ACTAAC-----CG-T----C-----AGTGGGC----TTCA
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      1030 27 -     78924 A-----C---C------------AAG---T------A--------TGAT-----TG-T----C-----AGTGGGC----TTGA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 4 C 0
s Perodicticus_ibeanus.k141_855320                            4282 40 +     13100 g-----a---a------------ggg---g------ttt----aataag-----tt-t----ccacctaatgggcgcaatgta
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             2650 40 +     25941 g-----a---a------------ggg---g------ttt----aataag-----tt-t----ccacctaatgggcgcaatgta
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       24999 32 +     32600 A-----T---C------------AAG---G------ATA----ACTAAT----TTG-T----C-----AGTGGGC----TTGA
i Perognathus_longimembris.PerPac_flattened_line_34437   I 2 C 0
s Peromyscus_maniculatus.KI615324.1                       18187531 27 -  18517816 A-----C---T------------AAA---A------AC--------AAT-----TG-C----T-----AGTAGCC----TTAA
i Peromyscus_maniculatus.KI615324.1                      I 2 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25512 25 -     29689 -----------------------------A------AAA----ACTAAT-----TG-T----C-----TGGGTAT----TTGG
i Petromus_typicus.PetTyp_scaffold_42190                 I 6 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8108 30 +     63832 A-----C---C------------AAG---G--GTAAT--------TAAT-----TG-T----C-----AG-GGGC----TTGA
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           37955 31 +     62158 A-----C---C------------AGG---A------GTA----ACTAAC-----CG-T----C-----AGTGGGC----TTCA
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        32684 31 +     89929 A-----C---C------------AGG---A------GTA----ACTAAC-----CG-T----C-----AGTGGGC----TTCA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34100 31 +     51399 A-----C---C------------AGG---A------GTA----ACTAAC-----CG-T----C-----AGTGGGC----TTCA
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290319 31 -  14605196 A-----C---C------------AGG---A------GTA----ACTAAC-----CG-T----C-----AGTGGGC----TTCA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_7723             79014 30 +     79650 G-----C---C------------AAG---G---TAAT--------TAAT-----TG-T----C-----AGTGGGC----TTGA
i Pipistrellus_pipistrellus.PipPip_scaffold_7723         C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           33820 30 +     35617 A-----T---C------------AAG---G--GTAAT--------TAAT-----TG-T----C-----AG-GGGC----TTGA
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189124864 27 + 189387572 A-----T---C------------AAG---A------GTA----ACT---------G-T----C-----AGTGGGC----TTGA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9564707 27 +   9816681 A-----T---C------------AAG---A------GTA----ACT---------G-T----C-----AGTGGGC----TTGA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               67596 31 -     81375 A-----C---C------------AGG---A------GTA----ACTAAC-----TG-T----C-----AGTGGGC----TTCA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9420 31 +     10147 A-----T---C------------AGG---A------GTA----ACTAAC-----TG-T----C-----AGTGGGC----TTCA
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9588 31 -     22811 A-----C---C------------AAA---T------GTA----ACCAAT-----TC-T----C-----AACGGAC----TGGA
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     985651 31 +   2598838 A-----C---C------------AAG---G------GTA----ACTAAT-----TG-T----C-----AGCGGGC----TTGA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          23939 31 +     38485 A-----C---C------------AAG---G------GTA----ACTAAT-----TG-T----C-----AGCGGGC----TTGA
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                              101 31 +      4256 A-----C---C------------AAG---G------GTA----ACTAAT-----TG-T----C-----AGCGGGC----TTGA
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          21459 31 +     35766 A-----C---C------------AAG---G------GTA----ACTAAT-----TG-T----C-----AGCGGGC----TTGA
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1630595                          16738 31 +     17239 A-----C---C------------AAG---G------GTA----ACTAAT-----TG-T----C-----AGCGGGC----TTGA
i Propithecus_perrieri.k141_1630595                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        23453 31 -     67325 A-----C---C------------AAG---G------GTA----ACTAAT-----TG-T----C-----AGCGGGC----TTGA
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_1019028                         13169 31 -     13615 A-----C---C------------AAG---G------GTA----ACTAAT-----TG-T----C-----AGCGGGC----TTGA
i Propithecus_verreauxi.k141_1019028                     C 0 C 0
s Psammomys_obesus.NESX01036370.1                             5529 24 -     21651 A-----C---T------------AAA---G------AC--------AAT-----TG-C----A-----Ggtagca----t---
i Psammomys_obesus.NESX01036370.1                        I 2 C 0
s Pteronotus_parnellii.KE909381.1                            10843 30 -     21811 a-----c---C------------AAG---G---TAAT--------TAAT-----TG-T----T-----AGTGGGC----TTGA
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36312 27 +     42204 T-----C---A------------AAA---G------G--------TGAT-----TG-T----C-----AGTGAGT----ATGA
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973335 31 +  28871421 A-----C---C------------AAGG--G---TAAT--------TAAT-----TG-T----C-----AGTATTC----TTAA
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1271 31 -      8028 A-----C---C------------AAGG--G---TAAT--------TAAT-----TG-T----C-----AGTACTC----TTAA
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20262749 14 -  38429054 -------------------------------------------------------A-T----C-----AGTGGGC----TTAA
i Puma_concolor.QAVW01001104.1                           I 20 C 0
s Pygathrix_cinerea.k141_1153803                              9424 31 -     91421 A-----C---C------------AGG---A------GTA----ACTAAC-----TG-T----C-----AGTGGGC----TTCA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603560 31 +   7812017 A-----C---C------------AGG---A------GTA----ACTAAC-----TG-T----C-----AGTGGGC----TTCA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9396 31 -     72585 A-----C---C------------AGG---A------GTA----ACTAAC-----TG-T----C-----AGTGGGC----TTCA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr8                                  20366314 27 + 133307652 A-----C---T------------AAA---G------AC--------AAC-----AG-C----T-----AGTTGTG----TTGA
i Rattus_norvegicus.chr8                                 I 694 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        366569 31 -   3329780 A-----C---C------------AAGG--G---TAAT--------TAAT-----TG-T----C-----AGTGGAC----TTGA
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                              810 31 -     11128 A-----C---C------------AGG---A------GTA----ACTAAC-----TG-T----C-----AGTGGGC----TTCA
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230188 31 - 195417433 A-----C---C------------AGG---A------GTA----ACTAAC-----TG-T----C-----AGTGGGC----TTCA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7665896 31 +   7961872 A-----C---C------------AGG---A------GTA----ACTAAC-----TG-T----C-----AGTGGGC----TTCA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84317 31 -     96226 A-----C---C------------AAGG--G---TAAT--------TAAT-----TG-T----C-----TGTAATC----TTAA
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151015 31 -    313613 A-----C---C------------AAG---G--GTAAT--------TAAC-----TG-C----C-----AGTGGGC----TTGA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          13939 31 -     19888 A-----C---C------------AGG---A------GTA----ACTAAC-----TG-T----C-----AGTGGGC----TTCA
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21145 31 +     39453 A-----C---C------------AGG---A------GTA----ACTAAC-----TG-T----C-----AGTGGGC----TTCA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            1669 31 +     27826 A-----C---C------------AGG---A------GTA----ACTAAC-----TG-T----C-----AGTGGGC----TTCA
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1189 31 -     19483 A-----C---C------------AGG---A------GTA----ACTAAC-----TG-T----C-----AGTGGGC----TTCA
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1253 31 +      7198 A-----C---C------------AGG---A------GTA----ACTAAC-----TG-T----C-----AGTGGGC----TTCA
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9511 31 +     15514 A-----C---C------------AGG---A------GTA----ACTAAC-----TG-T----C-----AGTGGGC----TTCA
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187326 27 -    191337 A-----C---C------------ATG---G------A--------TAAT-----TG-T----C-----AGTAAGC----TTGA
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13646696 31 -  18376816 A-----T---C------------CAG---A------G--TAAG--TAAT-----TA-T----C-----AATGGGA----TTGA
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1947836 32 -   3870691 A-----C---C------------AAG---A------GCA-A--ACTTAT-----TG-T----C-----AGTGgac----ttga
i Spermophilus_dauricus.KZ294078.1                       I 7 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             26850 27 +     97271 T-----C---C------------AAA---G------A--------TGAT-----TG-T----C-----AGGGGGC----ATGA
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 10 C 0
s Suricata_suricatta.SurSur_flattened_line_6629               6803 27 -    196729 A-----C---C------------AAG---T------G--------TGAT-----TG-T----C-----GGTGGGC----TTAA
i Suricata_suricatta.SurSur_flattened_line_6629          I 6 C 0
s Sus_scrofa.CM000828.4                                   62881832 31 -  69701581 A-----C---C------------AAG---G--GTAAT--------GAAT-----TG-T----C-----AGCAGGC----TTGA
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1087493 31 -   1523678 A-----T---C------------AAG---A------GTA----ACTAAC-----TG-T----C-----AGTGGGC----TTGA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6458 30 +     41958 A-----C---C------------AAG---G---TAAT--------TAAT-----TG-T----C-----AGTGGGC----TTGA
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69084 31 +    116680 A-----T---C------------AGT---G------AGA----ACTAAT-----TG-T----C-----AATAGGC----ATGA
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      114822 31 -    156842 A-----C---C------------AAG---G--GTAAT--------TAAT-----TA-T----C-----AGTGGGC----TTGC
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383286 31 +    539355 A-----C---C------------AAG---G--GTAAT--------TAAT-----TG-T----C-----AGTGGGC----TTGC
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1598868                                9254 35 -     11412 AAATAAC---C------------AAG---A------GAA----AC-AAT-----TT-T----C-----AGTGGGT----TTAA
i Tarsius_lariang.k141_1598868                           C 0 N 0
s Tarsius_wallacei.k141_780063                               13979 30 +     25099 ------C---C------------AAG---A------GAA----ACTAAT-----TT-T----C-----AGTGGGT----TTAA
i Tarsius_wallacei.k141_780063                           I 5 I 597
s Theropithecus_gelada.CM009954.1                        186422521 31 + 186847797 A-----C---C------------AAG---A------GTA----ACTAAC-----CG-T----C-----AGTGGGC----TTCA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              102665 31 +    114563 G-----C---C------------AGG---G------AGA----GCTAAT-----TG-T----C-----TATGGAG----TTGA
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 5 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   1496 31 +      8208 A-----C---C------------AAG---G------GTC----ACTAAT-----TG-T----C-----AGTGGGT----TTGA
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78605 30 +    610378 A-----C---C------------GAG---G---TAAT--------TAAT-----TG-T----C-----AGTGGGC----TTGA
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          5247 31 -     20410 A-----C---C------------AGG---A------GTA----ACTAAC-----TG-T----C-----AGTGGGC----TTCA
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9441 31 +     15221 A-----C---C------------AGG---A------GTA----ACTAAC-----TG-T----C-----AGTGGGC----TTCA
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5347 31 +     19930 A-----C---C------------AGG---A------GTA----ACTAAC-----TG-T----C-----AGTGGGC----TTCA
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       1775 31 -     19997 A-----C---C------------AGG---A------GTA----ACTAAC-----TG-T----C-----AGTGGGC----TTCA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            41895 31 -     60166 A-----C---C------------AGG---A------GTA----ACTAAC-----TG-T----C-----AGTGGGC----TTCA
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9368 31 -     27529 A-----C---C------------AGG---A------CTA----ACTAAC-----TG-T----C-----AGTGGGC----TTCA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9304 31 -     18194 A-----C---C------------AGG---A------GTA----AGTAAC-----TG-T----C-----AGTGGGC----TTCA
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3043 31 -     21137 A-----C---C------------AGG---A------GTA----ACTAAC-----TG-T----C-----AGTGGGC----TTCA
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    1743 31 -     10723 A-----C---C------------AGG---A------GTA----ACTAAC-----TG-T----C-----AGTGGGC----TTCA
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                          899 31 +      9834 A-----C---C------------AGG---A------GTA----ACTAAC-----TG-T----C-----AGTGGGC----TTCA
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19213 31 +     32220 A-----C---C------------AGG---A------GTA----ACTAAC-----TG-T----C-----AGTGGGC----TTCA
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933311 31 +   6242583 A-----C---C------------AGG---A------GTA----ACTAAC-----TG-T----C-----AGTGGGC----TTCA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2557 31 +     20839 A-----C---C------------AGG---A------GTA----ACTAAC-----TG-T----C-----AGTGGGC----TTCA
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_124071                    529 31 -      2171 A-----T---C------------ATG---G--GTAAT--------TAAC-----TG-T----C-----AGGGAGC----TTGT
i Tragulus_javanicus.TraJav_scaffold_124071              C 0 C 0
s Trichechus_manatus.JH594705.1                            4292006 31 +  10818551 A-----C---C------------AAG---G------GTA----ACTAAT-----TC-T----C-----AGTGGGC----TTGA
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2149210 31 +   4065304 A-----C---C------------ACG---T------GTA----ACAGAT-----GA-C----C-----AATGGGC----TTGA
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     2832 31 -     10553 A-----C---C------------ACG---T------GTA----ATAGAC-----GA-C----C-----AGTGGGC----TTGA
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737308 30 +  33153633 A-----C---C------------AAG---G--GTAAT--------TAAT-----TA-T----C-----AG-GGGC----TTGA
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   51147 31 -     77625 A-----C---C------------AAA---G--GTAAT--------TAAT-----TG-T----C-----AGAGAGC----TTGA
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4846548 27 -   5085361 A-----C---C------------AAA---G------G--------TGAT-----TG-T----C-----AGTGGGC----TTGA
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368005 31 -   5488506 A-----C---C------------AAG---A--GTAAT--------TAAT-----TG-T----C-----AGTGggc----ttga
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7026 27 -     43706 A-----C---C------------AAG---G------A--------TGAT-----TG-T----C-----AATGGTG----TTGA
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19341 31 -     24430 A-----C---C------------AAG---A------GCA----ACTCAT-----TG-T----C-----AGTGGAC----TTAA
i Xerus_inauris.XerIna_scaffold_48378                    I 7 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1483 20 +      2932 ------------------------------------G--------TGAC-----TG-T----C-----AGTGGGC----TTGA
i Zalophus_californianus.ZalCal_flattened_line_63728     I 7 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9646 12 +     63895 ------------------------------------ATG----ACTAAT-----TG-T-------------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 8 I 5
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11000 30 +     12536 A-----C---C------------AAG---G--GTAAT--------TAAC-----TG-T----C-----AG-GGGC----TTGA
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Saiga_tatarica.SaiTat_scaffold_373180                       3225 222 +      4321 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4576 218 +     55207 I
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Pantholops_hodgsonii.KE114653.1                          1264036 222 -   2937107 I
e Ovis_canadensis.OviCan_scaffold_2572                      173103 222 -    191736 I
e Ovis_aries.CM001607.2                                   17584682 222 +  44047080 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144328 218 +    630418 I
e Ochotona_princeps.JH802162.1                             1355292  2 +   3988456 I
e Moschus_moschiferus.MosMos_scaffold_61429                  27091 222 -     27816 I
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17151 222 +     36099 I
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Elaphurus_davidianus.JRFZ01104969.1                       309953 220 +    607251 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Capra_hircus.CM004588.1                                 18059667 222 -  44709034 I
e Capra_aegagrus.CM003241.1                               18828947 222 +  46296322 I
e Bubalus_bubalis.KI419123.1                               2818124 220 +   4408762 I
e Bos_taurus.CM000203.6                                   18082634 220 +  45695690 I
e Bos_mutus.JH880303.1                                     1124552 224 -   1948126 I
e Bos_indicus.CM003047.1                                  20271996 220 +  48749331 I
e Bison_bison.KN261452.1                                    198791 220 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    25751 222 +     34529 I
e Antilocapra_americana.AntAmePen_scaffold_12469             97280 223 -    100397 I
e Ammotragus_lervia.NIVO01071767.1                          674829 222 -   2318259 I

a score=0.000000
s hg38.chrUn_KI270753v1                                        494 10 +     62944 G----------------------A------A--------A--C---AGAT-C
s Acinonyx_jubatus.LLWD01001279.1                           816614 10 -   1699592 A----------------------A------G--------A--T---AAAT-C
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     66374 10 +     87051 G----------------------A------A--------A--T---TGAT-C
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506575 10 -  29979442 G----------------------A------A--------A--C---AAAT-C
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             74866 10 -    347723 G----------------------A------A--------A--T---AAAT-C
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64662  9 -     89534 G----------------------T------A--------A--T---T-AT-C
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    8967 10 -     52922 G----------------------A------A--------A--C---AGAT-C
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          8892 10 -     28001 G----------------------A------A--------A--C---AGAT-C
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9018 10 -      9772 G----------------------A------A--------A--C---AGAT-C
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            175 10 -     12518 G----------------------A------A--------A--C---AGAT-C
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      182778 10 +    412891 A----------------------A------A--------A--T---AAAC-C
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       6906 11 +     20879 A----------------------A------A-------AA--A---AAAT-C
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14089 10 +     17124 g----------------------g------g--------a--t---acat-g
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2130 10 +     43469 A----------------------A------A--------A--G---AAAT-C
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  48952 16 -     92717 G----------------------AAATGTTA--------A--T---AGAT-C
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              49577 16 +     85213 G----------------------AAATGTTA--------A--T---AGAT-C
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191194 10 +  23207421 G----------------------G------A--------A--T---AAAT-C
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         1660 10 -     18090 G----------------------G------A--------A--T---AAAT-C
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998547 11 -  17673402 g----------------------a------a--------aa-a---aaat-c
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331011 11 -   7040546 g----------------------a------a--------aa-a---aaat-c
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399287 11 -   1652518 g----------------------a------a--------aa-a---aaat-c
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795430 10 -  60362399 G----------------------A------T--------A--T---AAAT-C
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181486 10 -    185531 G----------------------A------T--------A--T---AAAT-C
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9030873 10 -   9314153 G----------------------A------t--------a--t---aaat-c
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955137 10 -  59632846 G----------------------A------t--------a--t---aaat-c
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496441 10 +  63665305 G----------------------A------T--------A--T---AAAT-C
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                     609  8 -     12242 ------------------------------A--------A--C---AGAT-C
i Capromys_pilorides.CapPil_scaffold_65020               I 2 C 0
s Carlito_syrichta.NW_007259797.1                           140683 10 -    496798 g----------------------a------a--------a--t---aggt-c
i Carlito_syrichta.NW_007259797.1                        I 284 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2548 10 -     11696 A----------------------A------A--------A--T---AAAT-C
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133307 10 +    179628 A----------------------A------A--------T--T---TCAT-C
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     88361 10 +    217609 G----------------------A------A--------A--T---AAAT-C
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18347142 10 -  23392119 a----------------------a------a--------a--t---agat-t
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18359402 10 -  23407841 a----------------------a------a--------a--t---agat-t
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98277 10 +    143979 A----------------------A------A--------A--T---AGAT-T
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         4601 10 -      8605 g----------------------a------a--------a--T---AGGT-C
i Cephalopachus_bancanus.k141_2037105                    I 284 C 0
s Ceratotherium_simum.JH767749.1                          12227522 10 +  27778364 G----------------------A------A--------A--T---AAAT-C
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2240 10 -      3715 G----------------------A------A--------A--T---AAAT-C
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4469936 10 +   4669795 G----------------------A------A--------A--C---AGAT-C
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8485 10 -     19203 G----------------------A------A--------A--C---AGAT-C
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           2904 10 +      8260 G----------------------A------A--------A--C---AGAT-C
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3134 10 +     27781 G----------------------A------A--------A--C---AGAT-C
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3280 10 -     20310 G----------------------A------A--------A--C---AGAT-C
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6264 10 +     29689 G----------------------A------A--------A--C---GGAT-C
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             617 10 +      9989 G----------------------A------A--------A--C---AGAT-C
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           8952 10 -     27936 G----------------------A------A--------A--C---AGAT-C
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             8971 10 -     11289 G----------------------A------A--------A--C---AGAT-C
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811347 10 +  39242232 G----------------------A------A--------A--C---AGAT-C
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217038 10 -  21565898 G----------------------A------A--------A--C---AGAT-C
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34158 10 -     53127 G----------------------A------A--------A--C---AGAT-C
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1450 10 +      7159 G----------------------A------A--------A--C---AGAT-C
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        8963 10 -     27947 G----------------------A------A--------A--C---AGAT-C
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          8939 10 +     17596 G----------------------A------A--------A--C---AGAT-C
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39433 10 -     41420 G----------------------A------A--------A--C---AGAT-C
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4460  9 -      6351 A----------------------A------A--------G--T---C-AA-T
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16376 16 -     52598 G----------------------AAATATTA--------A--T---AGAT-C
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           11725 16 +     57038 G----------------------AAATATTA--------A--T---AGAT-C
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1248172 10 +   2543920 A----------------------A------A--------A--T---AGAT-C
i Chinchilla_lanigera.JH722012.1                         I 10 C 0
s Chlorocebus_aethiops.ctg25                              18422902 10 -  18827391 G----------------------A------A--------A--C---AGAT-C
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9345 10 -     50209 G----------------------A------A--------A--C---AGAT-C
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416350 10 + 135778131 G----------------------A------A--------A--C---AGAT-C
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 14793  9 +     19366 G----------------------A------A--------A--T---A-AT-C
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            169888  9 +    839153 G----------------------A------A--------A--T---A-AT-C
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_172426               8888 10 -     10935 A----------------------A------A--------G--C---AAAT-T
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          C 0 C 0
s Colobus_angolensis.KN981557.1                            1904870 10 +   2368649 G----------------------A------A--------A--C---AGAT-C
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944488 10 + 200372422 G----------------------A------A--------A--C---AGAT-C
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31382 10 +     84244 G----------------------A------A--------A--C---AGAT-C
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545631  9 -  53390261 G----------------------A------A--------A--T---A-AT-C
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10177  1 -     20389 G---------------------------------------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 46618 11 +     63868 A---------------------AA------A--------A--T---TGAT-C
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11663604 10 + 224834208 G----------------------A------A--------T--T---TGCT-C
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_586775               770  9 -      1981 T----------------------A------A--------A--T---AAA--C
i Crocidura_indochinensis.CroInd_scaffold_586775         n 9 n 9
s Cryptoprocta_ferox.CryFer_flattened_line_16129             17633 10 -     87169 G----------------------A------A--------A--T---AAAT-C
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35046 32 +     51376 aaaatagatcttaagagccagcca------a--------a--t---aggt-c
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 240
s Cuniculus_paca.CunPac_flattened_line_231100                 2517 10 +      5455 A----------------------A------A--------A--T---AGAT-C
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793             910 10 +      3576 A----------------------A------A--------A--T---AGAT-C
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            60707  9 +   2246927 A----------------------A------A--------G--T---G-AA-G
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532552 10 -  12879189 G----------------------A------A--------A--T---AGAT-G
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16810830 10 +  35494412 G----------------------G------A--------A--T---AAAT-C
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8627579 10 +  20541912 A----------------------A------A--------A--T---AAAT-C
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669054 10 +   1390856 G----------------------A------A--------A--T---AAAT-C
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2129 10 +    198055 G----------------------A------A--------A--T---AAAT-C
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    33969 10 +     67921 A----------------------A------A--------A--T---AGAT-C
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18895478 10 +  37912305 G----------------------A------A--------A--T---TGTT-C
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  11687 10 +     14536 G----------------------A------A--------A--T---TGTT-C
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31163 10 -     42551 A----------------------A------A--------A--T---AGAT-T
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE759718.1                                   7093 10 +     11740 G----------------------A------A--------G--T---AAAT-T
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1088657 11 +  10337057 g----------------------g------g--------gaaa---aaat--
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          12411 10 -    110024 G----------------------A------A--------A--T---TGCT-C
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01123422.1                            3361 10 +      5358 G----------------------A------A--------A--T---TGAT-C
i Ellobius_talpinus.LOJH01123422.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16325431 10 -  41312741 G----------------------A------A--------G--T---AAAT-C
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2143429 10 -  14770903 A----------------------A------A--------A--T---AAGT-C
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279396 10 +   4378816 g----------------------a------a--------a--t---aaat-c
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527217 10 -  39960074 g----------------------a------a--------a--t---aaat-c
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29232 10 +    498745 g----------------------a------a--------a--t---aaat-c
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3320446  9 -   7059049 g----------------------a------a--------a--t---aaa--t
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21199581 10 -  21539334 G----------------------A------A--------A--C---AGAT-C
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10506 10 +    133382 G----------------------G------A--------A--T---AAAT-C
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24444 10 -     44125 G----------------------G------A--------A--T---AAAT-C
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.KN305074.1                                       278 10 -      2052 A----------------------A------G--------A--T---AAAT-C
i Felis_catus.KN305074.1                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20185044 10 + 205367284 A----------------------A------G--------A--T---AAAT-C
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_125938                10158 10 -     11347 A----------------------A------G--------A--T---AAAT-C
i Felis_nigripes.FelNig_flattened_line_125938            C 0 C 0
s Fukomys_damarensis.KN121974.1                             848192  8 +   3816255 ------------------------------a--------a--t---aaat-c
i Fukomys_damarensis.KN121974.1                          I 1 C 0
s Galagoides_demidoff.k141_31856                              2583 10 -      3432 G----------------------A------A--------A--T---AGAT-C
i Galagoides_demidoff.k141_31856                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25095 10 +     26054 C----------------------A------A--------A--T---AGAT-G
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30020 10 +     49224 G----------------------G------A--------A--T---AGAT-C
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                               9932 10 -     32273 G----------------------A------A--------A--C---AGAT-C
i Gorilla_beringei.k141_3596273                          I 31 C 0
s Gorilla_gorilla.LT578341.1                             186332085 10 + 186649187 G----------------------A------A--------A--C---AGAT-C
i Gorilla_gorilla.LT578341.1                             I 31 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   29741 10 +     78134 G----------------------G------A--------A--T---ATAT-C
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               230815  4 +    327341 G----------------------A------A--------A------------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20659070 10 +  22651954 A----------------------A------A--------A--T---AGAT-C
i Heterocephalus_glaber.JH602082.1                       I 9 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_173205                3011 10 -      3357 G----------------------C------T--------A--A---AAAT-A
i Heterohyrax_brucei.HetBruBak_scaffold_173205           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111686 10 +    128679 T----------------------G------A--------A--T---AAAT-C
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108052  1 +   1711038 G---------------------------------------------------
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39491  1 +     43066 G---------------------------------------------------
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    428919 10 +    630532 G----------------------A------A--------A--C---AGCT-C
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  32915 10 +     55795 G----------------------A------A--------A--T---AAAT-C
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19521 10 -    143317 A----------------------A------A--------A--T---GGAT-T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_307679                               11837 10 -     15490 G----------------------A------A--------A--C---AGCT-C
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              53842 10 +     67168 G----------------------A------A--------A--C---AGCT-C
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189537289 10 - 191637585 G----------------------A------A--------A--C---AGCT-C
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3330387 10 -  11177569 G----------------------A------A--------A--C---AGCT-C
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80614 10 +    135385 A----------------------A------A--------A--T---AGAT-C
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514224 21 -   7955117 g----------------------g------aaaaaaaaaa--aacaaaac-c
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   17809 16 +     31101 G----------------------AAATGTTA--------A--T---AGAT-C
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22047 10 +     23964 G----------------------G------A--------A--T---AAGT-C
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271024  9 -   9596543 g----------------------t------a--------a--t---t-at-c
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1314 10 -      3359 G----------------------G------A--------A--T---AAAT-C
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    11568 10 -     42476 A----------------------A------A--------A--T---AAGT-C
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6432 16 -     23766 G----------------------AAAAATTC--------A--T---AGAT-C
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24379 16 +     45836 G----------------------AAAAGTTC--------A--T---AGAT-C
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31289 16 -     32627 G----------------------AAAAGTTC--------A--T---AGAT-C
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      22437 16 +     54090 G----------------------AAAAATTC--------A--T---AGAT-C
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3035765 10 +   3914936 G----------------------A------A--------A--T---AAAT-C
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     3252 10 -     14121 G----------------------A------C--------A--T---AGAT-C
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             267128 10 -    662738 G----------------------G------A--------A--T---AAAT-C
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1431103 10 +   1826925 G----------------------A------A--------A--C---AGAT-C
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             340 10 +     11245 g----------------------g------g--------g--t---acat-a
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999175 10 +   6120653 g----------------------g------g--------g--t---acat-a
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214130  4 -  43346337 G----------------------A------A--------A------------
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951377 10 -  59628241 G----------------------A------T--------A--T---AAAT-C
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               1291 10 +     40492 G----------------------A------A--------A--C---AGAT-C
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670551 10 +  60120075 G----------------------A------A--------A--C---AGAT-C
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7049 10 -     26193 G----------------------A------A--------A--C---AGAT-C
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            74840 10 -    114318 G----------------------A------A--------A--C---AGAT-C
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   562 10 -     23192 G----------------------A------A--------A--C---AGAT-C
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10011 10 -     29190 G----------------------A------A--------A--C---AGAT-C
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18582 10 +     37952 G----------------------A------A--------A--C---AGAT-C
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833670 10 + 187317192 G----------------------A------A--------A--C---AGAT-C
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452228 10 -  25927173 G----------------------A------A--------A--C---AGAT-C
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74431 10 +     89720 G----------------------A------A--------A--C---AGAT-C
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1428 10 +     20474 G----------------------A------A--------A--C---AGAT-C
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1229 10 -     14993 G----------------------A------A--------A--C---AGAT-C
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  323861 10 -    668171 G----------------------A------A--------A--C---AGAT-C
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15371 10 -     15935 G----------------------A------A--------A--C---AGAT-C
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20167 10 -     45290 G----------------------A------A--------A--C---AGAT-C
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87235 10 +     94391 G----------------------A------A--------G--T---AAAT-T
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23931721 10 -  24302211 G----------------------A------A--------A--C---AGAT-C
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               345901 10 +    752769 G----------------------A------A--------A--C---AGAT-C
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15251 10 +    737560 G----------------------A------A--------A--T---AAAT-C
i Manis_javanica.JSZB01003497.1                          I 8 C 0
s Manis_pentadactyla.KN006162.1                              46641 10 -    317179 g----------------------a------a--------a--t---aaat-c
i Manis_pentadactyla.KN006162.1                          I 8 C 0
s Marmota_marmota.CZRN01000018.1                          33097081 18 -  40650429 g----------------------g------aaaaaaaaga--a---aaac-c
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6498  1 -    207569 G---------------------------------------------------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              5671 10 +     13704 G----------------------A------A--------A--T---AAAT-C
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12177951 10 -  29670104 G----------------------A------A--------T--T---CGAT-C
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    2715 10 +     10310 G----------------------G------A--------A--T---AAAT-C
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18282965 16 -  93316391 G----------------------AAATGTTA--------A--T---AGAT-C
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    15113 10 -    145209 G----------------------A------C--------A--T---AAAT-C
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13090 10 -     19307 A----------------------A------A--------A--T---AAAT-C
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11256329 10 -  27267610 G----------------------A------A--------A--T---TGCT-C
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1848520 10 +   8254450 A----------------------A------A--------A--T---AAAT-C
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32389 10 +     64694 A----------------------A------A--------A--T---AAAT-C
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3458 10 -     28506 G----------------------A------A--------A--C---AGAT-C
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62095 10 -     63350 G----------------------A------A--------A--T---AAAT-C
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      4326 16 -     37649 G----------------------AAATGTTA--------A--T---AGAT-C
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26220 10 -    437263 G----------------------G------A--------A--T---AAAT-C
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137495  9 -    366855 -----------------------A------A--------A--T---AAAT-C
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   23994 10 +     37127 G----------------------A------A--------A--T---AAAT-C
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           4578 10 +     14753 A----------------------A------A--------A--T---ACGT-C
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2011 10 +     14296 G----------------------A------A--------A--C---AGAT-C
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               297318 10 -  14710649 G----------------------A------A--------A--T---AAAT-C
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     70795  8 -     80779 ------------------------------A--------A--T---AGAT-G
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 2 C 0
s Myotis_brandtii.KE162005.1                                277686 10 -  10118263 A----------------------A------A--------A--T---AAGT-C
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585257 10 -   6019432 A----------------------A------A--------A--T---AAGT-C
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3901474 10 -   4330536 A----------------------A------A--------A--T---AAGT-C
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32023 10 +     33610 A----------------------A------A--------A--T---AAGT-C
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              185755  9 +    196477 G----------------------A------A--------G--T---A-AT-C
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025173 10 -   3037898 G----------------------C------A--------A--C---TGAT-C
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                                9471 10 +     21681 G----------------------A------A--------A--C---AGAT-C
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865176 10 +   7148211 G----------------------G------A--------A--T---AAAT-C
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756052 11 +    783361 A---------------------AA------A--------A--T---AAAT-C
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145642 10 -   9404916 G----------------------A------T--------A--T---AAAT-C
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102569624 10 - 196305487 G----------------------A------A--------A--T---AGAT-C
i Nycticebus_bengalensis.LG01                            T 4520 C 0
s Nycticebus_coucang.k141_2959429                              820 10 +      1168 G----------------------A------A--------A--T---AGAT-C
i Nycticebus_coucang.k141_2959429                        n 14 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105733651 10 + 199412804 G----------------------A------A--------A--T---AGAT-A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Octodon_degus.JH651603.1                                  746082 32 +  11899542 NNNNNNNNNNNNNNNNNNNNNNNN------N--------N--N---NNNN-N
i Octodon_degus.JH651603.1                               C 0 I 515
s Odobenus_rosmarus.KB229312.1                              500380 10 -   2017862 G----------------------A------A--------A--T---AAAT-c
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   16669 10 +     28053 G----------------------A------A--------A--T---TGCT-C
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    74772 10 +    102263 G----------------------A------A--------A--T---TGAT-C
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2781091 10 -  10937097 G----------------------G------A--------A--T---AAAT-C
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6474 10 -     18566 G----------------------A------A--------A--T---AAAT-C
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67144106 10 + 174332312 G----------------------A------C--------A--T---AGAT-C
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458392 10 -    559221 G----------------------A------T--------A--T---AAAT-C
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Pan_paniscus.KQ411613.1                                    35856 10 +     80009 G----------------------A------A--------A--C---AGAT-C
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189136806 10 + 189151597 G----------------------A------A--------A--C---AGAT-C
i Pan_troglodytes.CM009242.2                             N 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  140258 10 +    230217 A----------------------A------G--------A--T---AAAT-C
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                251787 10 +  18783137 A----------------------A------G--------A--T---AAAT-C
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4710228 10 -   8748460 A----------------------A------G--------A--T---AAAT-C
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183437043 10 + 183742232 G----------------------A------A--------A--C---AGAT-C
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1105 10 +     20448 G----------------------A------A--------A--C---AGAT-C
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20557727 10 +  20919399 G----------------------A------A--------A--C---AGAT-C
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_4051466                                   1305 10 -      1598 G----------------------A------A--------A--C---AGAT-C
i Papio_kindae.k141_4051466                              C 0 C 0
s Papio_papio.k141_802527                                     3137 10 +     27711 G----------------------A------A--------A--C---AGAT-C
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  3126 10 +      9205 G----------------------A------A--------A--C---AGAT-C
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      1057 10 -     78924 G----------------------A------A--------A--C---AAAT-C
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            4322 10 +     13100 g----------------------g------g--------a--t---acat-g
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             2690 10 +     25941 g----------------------g------g--------a--t---acat-g
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25031 10 +     32600 A----------------------A------A--------A--T---TGAT-C
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18187558 10 -  18517816 G----------------------A------A--------A--T---TGAT-C
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25537 10 -     29689 A----------------------A------A--------A--C---AGAT-C
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8138 10 +     63832 G----------------------G------A--------A--T---AAAT-C
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           37986 10 +     62158 G----------------------A------A--------A--C---AGAT-C
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        32715 10 +     89929 G----------------------A------A--------A--C---AGAT-C
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34131 10 +     51399 G----------------------A------A--------A--C---AGAT-C
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290350 10 -  14605196 G----------------------A------A--------A--C---AGAT-C
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_7723             79044 10 +     79650 A----------------------A------A--------A--T---AAGT-C
i Pipistrellus_pipistrellus.PipPip_scaffold_7723         C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           33850 10 +     35617 G----------------------G------A--------A--T---AAAT-C
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189124891 10 + 189387572 G----------------------A------A--------A--C---AGAT-C
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9564734 10 +   9816681 G----------------------A------A--------A--C---AGAT-C
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               67627 10 -     81375 G----------------------A------A--------A--C---AGAT-C
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9451 10 +     10147 G----------------------A------A--------A--C---AGAT-C
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9619 10 -     22811 G----------------------C------T--------A--A---AAAT-A
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     985682 16 +   2598838 G----------------------AAATGTTA--------A--T---AGAT-C
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          23970 16 +     38485 G----------------------AAATGTTA--------A--T---AGAT-C
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                              132 16 +      4256 G----------------------AAATGTTA--------A--T---AGAT-C
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          21490 16 +     35766 G----------------------AAATGTTA--------A--T---AGAT-C
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1630595                          16769 16 +     17239 G----------------------AAATGTTA--------A--T---AGAT-C
i Propithecus_perrieri.k141_1630595                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        23484 16 -     67325 G----------------------AAATGTTA--------A--T---AGAT-C
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_1019028                         13200 16 -     13615 G----------------------AAATGTTA--------A--T---AGAT-C
i Propithecus_verreauxi.k141_1019028                     C 0 C 0
s Pteronotus_parnellii.KE909381.1                            10873 10 -     21811 A----------------------A------A--------A--T---AAAT-C
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36339 10 +     42204 G----------------------A------A--------G--T---AAAT-C
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973366 10 +  28871421 G----------------------A------A--------G--T---AAAT-T
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1302 10 -      8028 G----------------------A------A--------G--T---AAAT-T
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20262763 10 -  38429054 A----------------------A------G--------A--T---AAAT-C
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                              9455 10 -     91421 G----------------------A------A--------A--C---AGAT-C
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603591 10 +   7812017 G----------------------A------A--------A--C---AGAT-C
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9427 10 -     72585 G----------------------A------A--------A--C---AGAT-C
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr8                                  20366341 10 + 133307652 T----------------------G------A--------A--T---agat-a
i Rattus_norvegicus.chr8                                 C 0 I 73
s Rhinolophus_sinicus.LVEH01000134.1                        366600  1 -   3329780 G---------------------------------------------------
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                              841 10 -     11128 G----------------------A------A--------A--C---AGAT-C
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230219 10 - 195417433 G----------------------A------A--------A--C---AGAT-C
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7665927 10 +   7961872 G----------------------A------A--------A--C---AGAT-C
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84348 10 -     96226 G----------------------A------A--------G--T---AAAT-T
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151046 10 -    313613 G----------------------A------A--------A--T---AAAT-C
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          13970 10 -     19888 G----------------------A------A--------A--C---AGAT-C
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21176 10 +     39453 G----------------------A------A--------A--C---AGAT-C
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            1700 10 +     27826 G----------------------A------A--------A--C---AGAT-C
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1220 10 -     19483 G----------------------A------A--------A--C---AGAT-C
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1284 10 +      7198 G----------------------A------A--------A--C---AGAT-C
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9542 10 +     15514 G----------------------A------A--------A--C---AGAT-C
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187353 10 -    191337 G----------------------A------A--------A--T---AAAT-T
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13646727 10 -  18376816 G----------------------A------A--------A--T---AAT-TC
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1947868 19 -   3870691 g----------------------g-----gaaaaaaaaaa--a---aaac-t
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             26877 10 +     97271 G----------------------A------A--------A--T---AAAT-C
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629               6830 10 -    196729 G----------------------A------A--------A--T---AAAT-C
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   62881863 10 -  69701581 G----------------------A------A--------A--T---AAAT-C
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1087524 10 -   1523678 G----------------------A------A--------A--C---AGCT-C
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6488 10 +     41958 A----------------------A------A--------A--T---AAAT-C
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69115  9 +    116680 G----------------------A------A--------G--T---A-AT-C
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      114853 10 -    156842 A----------------------A------A--------A--T---AAAT-C
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383317  4 +    539355 A----------------------A------A--------A------------
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10301 10 +     70052 g----------------------a------a--------a--T---AGAT-C
i Tarsius_lariang.k141_2201908                           N 0 C 0
s Tarsius_wallacei.k141_780063                               14606 10 +     25099 g----------------------a------a--------a--T---AGAT-C
i Tarsius_wallacei.k141_780063                           I 597 C 0
s Theropithecus_gelada.CM009954.1                        186422552 10 + 186847797 G----------------------A------A--------A--C---AGAT-C
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              102696 10 +    114563 A----------------------A------A--------A--T---AGAT-C
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   1527  3 +      8208 A----------------------A------A---------------------
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78635 10 +    610378 A----------------------A------A--------A--T---AAAT-C
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          5278 10 -     20410 G----------------------A------A--------A--C---AGAT-C
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9472 10 +     15221 G----------------------A------A--------A--C---AGAT-C
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5378 10 +     19930 G----------------------A------A--------A--C---AGAT-C
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       1806 10 -     19997 G----------------------A------A--------A--C---AGAT-C
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            41926 10 -     60166 G----------------------A------A--------A--C---AGAT-C
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9399 10 -     27529 G----------------------A------A--------A--C---AGAT-C
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9335 10 -     18194 G----------------------A------A--------A--C---AGAT-C
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3074 10 -     21137 G----------------------A------A--------A--C---AGAT-C
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    1774 10 -     10723 G----------------------A------A--------A--C---AGAT-C
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                          930 10 +      9834 G----------------------A------A--------A--C---AGAT-C
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19244 10 +     32220 G----------------------A------A--------A--C---AGAT-C
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933342 10 +   6242583 G----------------------A------A--------A--C---AGAT-C
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2588 10 +     20839 G----------------------A------A--------A--C---AGAT-C
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_124071                    560 10 -      2171 G----------------------A------A--------A--T---AAAT-C
i Tragulus_javanicus.TraJav_scaffold_124071              C 0 C 0
s Trichechus_manatus.JH594705.1                            4292037 10 +  10818551 g----------------------a------a--------a--t---aaat-c
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2149241 10 +   4065304 G----------------------A------A--------A--T---CGAT-T
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     2863 10 -     10553 G----------------------A------A--------A--T---AGAT-T
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737338 10 +  33153633 G----------------------G------A--------A--T---AAAT-C
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   51178 10 -     77625 G----------------------A------T--------A--T---AAAT-C
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4846575 10 -   5085361 G----------------------A------A--------A--C---AAAT-C
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368036 11 -   5488506 g----------------------a------a--------aa-a---aaat-c
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7053 10 -     43706 G----------------------A------T--------A--T---AAAT-C
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19372 11 -     24430 G----------------------A------A-------AA--A---ACAT-C
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1503 10 +      2932 G----------------------A------A--------A--T---AAAT-C
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9663  9 +     63895 G----------------------T------A--------A--T---T-AT-C
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 5 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11030 10 +     12536 G----------------------G------A--------A--T---AAAT-C
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Saiga_tatarica.SaiTat_scaffold_373180                       3225 222 +      4321 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4576 218 +     55207 I
e Psammomys_obesus.NESX01036370.1                             5553  0 -     21651 C
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Pantholops_hodgsonii.KE114653.1                          1264036 222 -   2937107 I
e Ovis_canadensis.OviCan_scaffold_2572                      173103 222 -    191736 I
e Ovis_aries.CM001607.2                                   17584682 222 +  44047080 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144328 218 +    630418 I
e Ochotona_princeps.JH802162.1                             1355292  2 +   3988456 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Moschus_moschiferus.MosMos_scaffold_61429                  27091 222 -     27816 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27919  0 +    140813 C
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17151 222 +     36099 I
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Elaphurus_davidianus.JRFZ01104969.1                       309953 220 +    607251 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Capra_hircus.CM004588.1                                 18059667 222 -  44709034 I
e Capra_aegagrus.CM003241.1                               18828947 222 +  46296322 I
e Bubalus_bubalis.KI419123.1                               2818124 220 +   4408762 I
e Bos_taurus.CM000203.6                                   18082634 220 +  45695690 I
e Bos_mutus.JH880303.1                                     1124552 224 -   1948126 I
e Bos_indicus.CM003047.1                                  20271996 220 +  48749331 I
e Bison_bison.KN261452.1                                    198791 220 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    25751 222 +     34529 I
e Antilocapra_americana.AntAmePen_scaffold_12469             97280 223 -    100397 I
e Ammotragus_lervia.NIVO01071767.1                          674829 222 -   2318259 I

a score=0.000000
s hg38.chrUn_KI270753v1                                        504 4 +     62944 TCA--A
s Acinonyx_jubatus.LLWD01001279.1                           816624 4 -   1699592 CCA--A
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     66384 4 +     87051 TTA--A
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506585 4 -  29979442 CCA--A
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             74876 4 -    347723 CCA--A
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64671 4 -     89534 TTA--A
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    8977 4 -     52922 TCA--A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          8902 4 -     28001 TCA--A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9028 4 -      9772 TCA--A
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            185 4 -     12518 TCA--A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      182788 1 +    412891 C-----
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       6917 3 +     20879 CTA---
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14099 4 +     17124 gct--g
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2140 1 +     43469 C-----
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  48968 4 -     92717 TCA--T
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              49593 4 +     85213 TCA--T
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191204 4 +  23207421 CCA--A
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         1670 4 -     18090 CCA--A
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998558 4 -  17673402 cca--a
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331022 4 -   7040546 cca--a
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399298 4 -   1652518 cca--a
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795440 4 -  60362399 CCA--A
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181496 4 -    185531 CCA--A
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9030883 4 -   9314153 cca--a
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955147 4 -  59632846 cca--a
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496451 4 +  63665305 CCA--A
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                     617 4 -     12242 TTA--A
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           140693 4 -    496798 TCA--A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2558 1 -     11696 C-----
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133317 2 +    179628 TT----
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     88371 4 +    217609 CCA--A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 263
s Cavia_aperea.AVPZ01000300.1                             18347152 4 -  23392119 tta--a
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18359412 4 -  23407841 tta--a
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98287 4 +    143979 TTA--A
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         4611 4 -      8605 TCA--A
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227532 4 +  27778364 CCA--A
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2250 4 -      3715 CCA--A
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4469946 4 +   4669795 TCA--A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8495 4 -     19203 TCA--A
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           2914 4 +      8260 TCA--A
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3144 4 +     27781 TCA--A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3290 4 -     20310 TCA--A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6274 4 +     29689 TCA--A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             627 4 +      9989 TCA--A
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           8962 4 -     27936 TCA--A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             8981 4 -     11289 TCA--A
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811357 4 +  39242232 TCA--A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217048 4 -  21565898 TCA--A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34168 4 -     53127 TCA--A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1460 4 +      7159 TCA--A
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        8973 4 -     27947 TCA--A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          8949 4 +     17596 TCA--A
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39443 4 -     41420 TCA--A
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4469 4 -      6351 CCC--A
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16392 4 -     52598 TCA--A
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           11741 4 +     57038 TCA--A
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1248182 4 +   2543920 TTA--A
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18422912 4 -  18827391 TCA--A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9355 4 -     50209 TCA--A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416360 4 + 135778131 TCA--A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 14802 4 +     19366 CCC--A
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            169897 4 +    839153 CCC--A
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_172426               8898 4 -     10935 TCA--A
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          C 0 C 0
s Colobus_angolensis.KN981557.1                            1904880 4 +   2368649 TCA--A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944498 4 + 200372422 TCA--A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31392 4 +     84244 TCA--A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545640 4 -  53390261 cca--a
i Condylura_cristata.JH655891.1                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 46629 4 +     63868 TTC--A
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11663614 4 + 224834208 TTA--A
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_603213               780 4 +      1923 CCA--A
i Crocidura_indochinensis.CroInd_scaffold_603213         I 9 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             17643 4 -     87169 CCA--A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35318 4 +     51376 TTA--A
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 240 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2527 4 +      5455 TTA--A
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793             920 4 +      3576 TTA--A
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            60716 4 +   2246927 CCC--A
i Dasypus_novemcinctus.JH564415.1                        C 0 I 1
s Daubentonia_madagascariensis.ctg71                      12532562 4 -  12879189 TCA--A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16810840 4 +  35494412 CCA--A
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8627589 1 +  20541912 C-----
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669064 4 +   1390856 CCA--A
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2139 4 +    198055 CCA--A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    33979 4 +     67921 TTA--A
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31173 4 -     42551 TTA--A
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE759718.1                                   7103 1 +     11740 C-----
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          12421 4 -    110024 TTA--A
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01123422.1                            3371 4 +      5358 TTA--A
i Ellobius_talpinus.LOJH01123422.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16325441 4 -  41312741 CCA--A
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2143439 1 -  14770903 C-----
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279406 4 +   4378816 tta--a
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527227 4 -  39960074 tta--a
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29242 4 +    498745 tta--a
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21199591 4 -  21539334 TCA--A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10516 4 +    133382 CCA--A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24454 4 -     44125 CCA--A
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.KN305074.1                                       288 4 -      2052 CCA--A
i Felis_catus.KN305074.1                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20185054 4 + 205367284 CCA--A
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_125938                10168 4 -     11347 CCA--A
i Felis_nigripes.FelNig_flattened_line_125938            C 0 C 0
s Fukomys_damarensis.KN121974.1                             848200 4 +   3816255 tta--a
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galagoides_demidoff.k141_31856                              2593 4 -      3432 TCA--A
i Galagoides_demidoff.k141_31856                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25105 4 +     26054 TCA--A
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30030 4 +     49224 TTA--G
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                               9942 4 -     32273 TCA--A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186332095 4 + 186649187 TCA--A
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   29751 4 +     78134 TTA--G
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20659080 4 +  22651954 TTA--A
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_173205                3021 4 -      3357 TCA--A
i Heterohyrax_brucei.HetBruBak_scaffold_173205           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111696 4 +    128679 CCA--A
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hoolock_leuconedys.ctg274                                    428929 4 +    630532 CCA--A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  32925 4 +     55795 CCA--A
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19531 4 -    143317 TTA--A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_307679                               11847 4 -     15490 TCA--A
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              53852 4 +     67168 TCA--A
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189537299 4 - 191637585 TCA--A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3330397 4 -  11177569 TCA--A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80624 3 +    135385 TTA---
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514245 4 -   7955117 tta--a
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   17825 4 +     31101 TCA--T
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22057 4 +     23964 CCA--A
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271033 4 -   9596543 tta--a
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1324 4 -      3359 CCA--A
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    11578 1 -     42476 C-----
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6448 4 -     23766 TCA--T
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24395 4 +     45836 TCA--T
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31305 4 -     32627 TCA--C
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      22453 4 +     54090 TCA--T
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3035775 4 +   3914936 CCA--A
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     3262 4 -     14121 TCA--A
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             267138 4 -    662738 CCA--A
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1431113 4 +   1826925 TCA--A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             350 4 +     11245 gca--g
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999185 4 +   6120653 gca--g
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17951387 4 -  59628241 CCA--A
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               1301 4 +     40492 TCA--A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670561 4 +  60120075 TCA--A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7059 4 -     26193 TCA--A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            74850 4 -    114318 TCA--A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   572 4 -     23192 TCA--A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10021 4 -     29190 TCA--A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18592 4 +     37952 TCA--A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833680 4 + 187317192 TCA--A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452238 4 -  25927173 TCA--A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74441 4 +     89720 TCA--A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1438 4 +     20474 TCA--A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1239 4 -     14993 TCA--A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  323871 4 -    668171 TCA--A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15381 4 -     15935 TCA--A
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20177 4 -     45290 TCA--A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87245 1 +     94391 C-----
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23931731 4 -  24302211 TCA--A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               345911 4 +    752769 TCA--A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15261 4 +    737560 cca--c
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              46651 3 -    317179 -ca--c
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097099 4 -  40650429 tta--a
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              5681 4 +     13704 TCA--A
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 27919 4 +    140813 TTA--A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12177961 4 -  29670104 TTA--T
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    2725 4 +     10310 CCA--A
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18282981 4 -  93316391 tca--a
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    15123 4 -    145209 TCA--A
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13100 1 -     19307 C-----
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11256339 4 -  27267610 TTA--A
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1848530 1 +   8254450 C-----
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32399 1 +     64694 C-----
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3468 4 -     28506 TCA--G
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62105 4 -     63350 CCA--A
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      4342 4 -     37649 TCA--A
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26230 4 -    437263 CCA--A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137504 1 -    366855 C-----
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   24004 4 +     37127 CCA--A
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           4588 1 +     14753 C-----
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2021 4 +     14296 CTA--G
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               297328 4 -  14710649 CCA--A
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     70803 4 -     80779 TTA--A
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                277696 1 -  10118263 C-----
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585267 1 -   6019432 C-----
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3901484 1 -   4330536 C-----
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32033 1 +     33610 C-----
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              185764 4 +    196477 CCA--A
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025183 4 -   3037898 TTA--A
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                                9481 4 +     21681 TCA--A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865186 4 +   7148211 CCA--A
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756063 1 +    783361 C-----
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145652 4 -   9404916 CCA--A
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102569634 4 - 196305487 TCA--A
i Nycticebus_bengalensis.LG01                            C 0 I 4520
s Nycticebus_coucang.k141_2959429                              830 4 +      1168 TCA--A
i Nycticebus_coucang.k141_2959429                        C 0 I 26
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105733661 4 + 199412804 TCA--A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 10921
s Odobenus_rosmarus.KB229312.1                              500390 4 -   2017862 cca--a
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   16679 4 +     28053 TTA--A
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    74782 4 +    102263 TTA--A
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2781101 4 -  10937097 CCA--A
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6484 4 -     18566 TCA--G
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67144116 4 + 174332312 TCA--A
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458402 4 -    559221 CCA--A
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Pan_paniscus.KQ411613.1                                    35866 4 +     80009 TCA--A
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189136816 4 + 189151597 TCA--A
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  140268 4 +    230217 CCA--A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                251797 4 +  18783137 CCA--A
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4710238 4 -   8748460 CCA--A
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183437053 4 + 183742232 TCA--A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1115 4 +     20448 TCA--A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20557737 4 +  20919399 TCA--A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_4051466                                   1315 4 -      1598 TCA--A
i Papio_kindae.k141_4051466                              C 0 C 0
s Papio_papio.k141_802527                                     3147 4 +     27711 TCA--A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  3136 4 +      9205 TCA--A
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      1067 4 -     78924 CCA--A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            4332 4 +     13100 gca--g
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             2700 4 +     25941 gca--g
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18187568 4 -  18517816 TTA--A
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25547 4 -     29689 TTA--A
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8148 4 +     63832 CCA--A
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           37996 4 +     62158 TCA--A
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        32725 4 +     89929 TCA--A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34141 4 +     51399 TCA--A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290360 4 -  14605196 TCA--A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_7723             79054 1 +     79650 C-----
i Pipistrellus_pipistrellus.PipPip_scaffold_7723         C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           33860 4 +     35617 CCA--A
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189124901 4 + 189387572 TCA--A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9564744 4 +   9816681 TCA--A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               67637 4 -     81375 TCA--A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9461 4 +     10147 TCA--A
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9629 4 -     22811 TCA--A
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     985698 4 +   2598838 TCA--T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          23986 4 +     38485 TCA--T
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                              148 4 +      4256 TCA--T
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          21506 4 +     35766 TCA--T
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1630595                          16785 4 +     17239 TCA--T
i Propithecus_perrieri.k141_1630595                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        23500 4 -     67325 TCA--T
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_1019028                         13216 4 -     13615 TCA--T
i Propithecus_verreauxi.k141_1019028                     C 0 C 0
s Psammomys_obesus.NESX01036370.1                             5553 4 -     21651 tta--a
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            10883 1 -     21811 C-----
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36349 4 +     42204 CCA--A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973376 1 +  28871421 C-----
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1312 1 -      8028 C-----
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20262773 4 -  38429054 CCA--A
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                              9465 4 -     91421 TCA--A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603601 4 +   7812017 TCA--A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9437 4 -     72585 TCA--A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr8                                 113028364 4 - 133307652 TTA--A
i Rattus_norvegicus.chr8                                 I 39 C 0
s Rhinopithecus_bieti.k119_217274                              851 4 -     11128 TCA--A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230229 4 - 195417433 TCA--A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7665937 4 +   7961872 TCA--A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84358 1 -     96226 C-----
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151056 4 -    313613 CCA--A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          13980 4 -     19888 TCA--A
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21186 4 +     39453 TCA--A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            1710 4 +     27826 TCA--A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1230 4 -     19483 TCA--A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1294 4 +      7198 TCA--A
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9552 4 +     15514 TCA--A
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187363 6 -    191337 CTGATA
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13646737 4 -  18376816 CCA--A
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1947887 4 -   3870691 tta--a
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             26887 4 +     97271 CCA--A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629               6840 4 -    196729 CCA--A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   62881873 4 -  69701581 CCA--A
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1087534 4 -   1523678 TCA--A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6498 1 +     41958 C-----
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69124 4 +    116680 CCA--A
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      114863 4 -    156842 CCA--A
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tarsius_lariang.k141_2201908                               10311 4 +     70052 TCA--A
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               14616 4 +     25099 TCA--A
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422562 4 + 186847797 TCA--A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              102706 4 +    114563 TTA--A
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78645 1 +    610378 C-----
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          5288 4 -     20410 TCA--A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9482 4 +     15221 TCA--A
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5388 4 +     19930 TCA--A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       1816 4 -     19997 TCA--A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            41936 4 -     60166 TCA--A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9409 4 -     27529 TCA--A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9345 4 -     18194 TCA--A
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3084 4 -     21137 TCA--A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    1784 4 -     10723 TCA--A
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                          940 4 +      9834 TCA--A
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19254 4 +     32220 TCA--A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933352 4 +   6242583 TCA--A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2598 4 +     20839 TCA--A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_124071                    570 4 -      2171 CCA--A
i Tragulus_javanicus.TraJav_scaffold_124071              C 0 C 0
s Trichechus_manatus.JH594705.1                            4292047 4 +  10818551 tca--a
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2149251 4 +   4065304 TCA--A
i Tupaia_chinensis.KB320699.1                            C 0 I 1
s Tupaia_tana.TupTan_flattened_line_97126                     2873 4 -     10553 TCA--A
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 1
s Tursiops_truncatus.MRVK01000835.1                       15737348 4 +  33153633 CCA--A
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   51188 4 -     77625 CCA--A
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4846585 4 -   5085361 CCA--A
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368047 4 -   5488506 cca--a
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7063 4 -     43706 CCA--A
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19383 4 -     24430 TTA--A
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1513 4 +      2932 CCA--A
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9672 5 +     63895 TGAA-A
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11040 4 +     12536 CCA--A
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Varecia_variegata.k141_1128296                              7155 0 +     24756 C
e Varecia_rubra.k141_590885                                   7107 0 +     50397 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   1530 0 +      8208 C
e Tapirus_terrestris.TapTer_scaffold_755                    383321 0 +    539355 C
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Saiga_tatarica.SaiTat_scaffold_373180                       3225 222 +      4321 I
e Rhinolophus_sinicus.LVEH01000134.1                        366601 0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4576 218 +     55207 I
e Prolemur_simus.MPIZ01000396.1                            2592414 0 -   4620579 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25041 0 +     32600 C
e Pantholops_hodgsonii.KE114653.1                          1264036 222 -   2937107 I
e Ovis_canadensis.OviCan_scaffold_2572                      173103 222 -    191736 I
e Ovis_aries.CM001607.2                                   17584682 222 +  44047080 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144328 218 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1355292 2 +   3988456 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Moschus_moschiferus.MosMos_scaffold_61429                  27091 222 -     27816 I
e Megaderma_lyra.MegLyr_scaffold_4542                         6499 0 -    207569 C
e Loxodonta_africana.GL010049.1                            4214134 0 -  43346337 C
e Lemur_catta.scaffold_24                                 15519761 0 -  30322482 C
e Hipposideros_galeritus.HipGal_scaffold_29171               39492 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       108053 0 +   1711038 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17151 222 +     36099 I
e Helogale_parvula.HelPar_flattened_line_2585               230819 0 +    327341 C
e Hapalemur_occidentalis.k141_907772                          9234 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402 0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298 0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517 0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                               9432 0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267 0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247 0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321 0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369 0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369 0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184 0 -     25546 C
e Eulemur_collaris.k141_377015                                2154 0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453 0 -     14127 C
e Erinaceus_europaeus.JH835339.1                           3320455 0 -   7059049 C
e Elephantulus_edwardii.JH947257.1                         1088668 0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       309953 220 +    607251 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  11697 0 +     14536 C
e Dipodomys_ordii.KN672350.1                              18895488 0 +  37912305 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          10178 0 -     20389 C
e Capra_hircus.CM004588.1                                 18059667 222 -  44709034 I
e Capra_aegagrus.CM003241.1                               18828947 222 +  46296322 I
e Bubalus_bubalis.KI419123.1                               2818124 220 +   4408762 I
e Bos_taurus.CM000203.6                                   18082634 220 +  45695690 I
e Bos_mutus.JH880303.1                                     1124552 224 -   1948126 I
e Bos_indicus.CM003047.1                                  20271996 220 +  48749331 I
e Bison_bison.KN261452.1                                    198791 220 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    25751 222 +     34529 I
e Antilocapra_americana.AntAmePen_scaffold_12469             97280 223 -    100397 I
e Ammotragus_lervia.NIVO01071767.1                          674829 222 -   2318259 I

a score=0.000000
s hg38.chrUn_KI270753v1                                        508  5 +     62944 A--------GT---------AA
s Acinonyx_jubatus.LLWD01001279.1                           816628  5 -   1699592 A--------AT---------AA
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     66388  5 +     87051 A--------AT---------AA
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506589  5 -  29979442 A--------AT---------AA
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             74880  5 -    347723 A--------AT---------AA
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64675  5 -     89534 A--------AT---------AA
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    8981  5 -     52922 C--------GT---------AA
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          8906  5 -     28001 C--------GT---------AA
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9032  5 -      9772 C--------GT---------AA
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            189  5 -     12518 C--------GT---------AA
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14103 13 +     17124 acctcctggat---------ga
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Avahi_laniger.k141_765380                                  48972  4 -     92717 A--------G----------AA
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              49597  4 +     85213 A--------G----------AA
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191208  5 +  23207421 A--------AC---------AA
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         1674  5 -     18090 A--------AC---------AA
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998562  5 -  17673402 a--------at---------aa
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331026  5 -   7040546 a--------at---------aa
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399302  5 -   1652518 a--------at---------aa
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795444  5 -  60362399 A--------AT---------AA
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181500  5 -    185531 A--------AT---------AA
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9030887  5 -   9314153 a--------at---------aa
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955151  5 -  59632846 a--------at---------aa
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496455  5 +  63665305 A--------AT---------AA
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                     621  5 -     12242 A--------AT---------AA
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           140697  5 -    496798 A--------GT---------AA
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133319  2 +    179628 --------------------AA
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     88638  5 +    217609 A--------AT---------AA
i Catagonus_wagneri.CatWag_scaffold_2839                 I 263 C 0
s Cavia_aperea.AVPZ01000300.1                             18347156  5 -  23392119 a--------at---------aa
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18359416  5 -  23407841 a--------at---------aa
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98291  5 +    143979 A--------AT---------AA
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         4615  5 -      8605 A--------GT---------AA
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227536  5 +  27778364 A--------AT---------AA
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2254  5 -      3715 A--------AT---------AA
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4469950  5 +   4669795 C--------GT---------AA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8499  5 -     19203 C--------GT---------AA
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           2918  5 +      8260 C--------GT---------AA
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3148  5 +     27781 C--------GT---------AA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3294  5 -     20310 C--------GT---------AA
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6278  5 +     29689 C--------GT---------AA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             631  5 +      9989 C--------GT---------AA
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           8966  5 -     27936 C--------GT---------AA
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             8985  5 -     11289 C--------GT---------AA
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811361  5 +  39242232 C--------GT---------AA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217052  5 -  21565898 C--------GT---------AA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34172  5 -     53127 C--------GT---------AA
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1464  5 +      7159 C--------GT---------AA
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        8977  5 -     27947 C--------GT---------AA
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          8953  5 +     17596 C--------GT---------AA
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39447  5 -     41420 C--------GT---------AA
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4473  5 -      6351 A--------GT---------AA
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16396  5 -     52598 A--------A--T-------AA
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           11745  5 +     57038 A--------A--T-------AA
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1248186  5 +   2543920 A--------AT---------AA
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18422916  5 -  18827391 C--------GT---------AA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9359  5 -     50209 C--------GT---------AA
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416364  5 + 135778131 C--------GT---------AA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 14806  5 +     19366 A--------AT---------AA
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            169901  5 +    839153 A--------AT---------AA
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_172426               8902  5 -     10935 A--------AT---------AA
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          C 0 C 0
s Colobus_angolensis.KN981557.1                            1904884  5 +   2368649 C--------GT---------TA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944502  5 + 200372422 C--------GT---------TA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31396  5 +     84244 C--------GT---------TA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545644  5 -  53390261 a--------ac---------aa
i Condylura_cristata.JH655891.1                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 46633  5 +     63868 A--------AT---------AA
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11663618  5 + 224834208 A--------AT---------AA
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_603213               784  5 +      1923 A--------AC---------AA
i Crocidura_indochinensis.CroInd_scaffold_603213         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             17647  5 -     87169 A--------AT---------AA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35322  5 +     51376 A--------AT---------AA
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2531  5 +      5455 A--------AT---------AA
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793             924  5 +      3576 A--------AA---------AA
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            60721  5 +   2246927 A--------GT---------AA
i Dasypus_novemcinctus.JH564415.1                        I 1 C 0
s Daubentonia_madagascariensis.ctg71                      12532566  5 -  12879189 A--------AT---------AA
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16810844  5 +  35494412 A--------AC---------AA
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669068  5 +   1390856 A--------AT---------AA
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2143  5 +    198055 A--------AT---------AA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    33983  5 +     67921 A--------AT---------AA
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18895488  1 +  37912305 ---------------------A
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  11697  1 +     14536 ---------------------A
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31177  5 -     42551 A--------AT---------AA
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          12425  5 -    110024 A--------AT---------AA
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01123422.1                            3375  5 +      5358 A--------AT---------AA
i Ellobius_talpinus.LOJH01123422.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16325445  5 -  41312741 A--------AT---------AA
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279410  5 +   4378816 a--------at---------aa
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527231  5 -  39960074 a--------at---------aa
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29246  5 +    498745 a--------at---------aa
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21199595  5 -  21539334 C--------GT---------AA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10520  5 +    133382 A--------AC---------AA
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24458  5 -     44125 A--------AC---------AA
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.KN305074.1                                       292  5 -      2052 A--------AT---------AA
i Felis_catus.KN305074.1                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20185058  5 + 205367284 A--------AT---------AA
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_125938                10172  5 -     11347 A--------AT---------AA
i Felis_nigripes.FelNig_flattened_line_125938            C 0 C 0
s Fukomys_damarensis.KN121974.1                             848204  1 +   3816255 a---------------------
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galagoides_demidoff.k141_31856                              2597  5 -      3432 A--------AT---------AA
i Galagoides_demidoff.k141_31856                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25109  5 +     26054 A--------AT---------AA
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 I 1
s Glis_glis.GliGli_scaffold_19807                            30034  4 +     49224 A--------AT---------A-
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                               9946  5 -     32273 A--------GT---------AA
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186332099  5 + 186649187 A--------GT---------AA
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   29755  5 +     78134 A--------GT---------AA
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               230819  3 +    327341 ----------T---------AA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20659084  5 +  22651954 A--------AT---------AA
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_173205                3025  5 -      3357 C--------AT---------AA
i Heterohyrax_brucei.HetBruBak_scaffold_173205           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111700  5 +    128679 A--------AT---------AA
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hoolock_leuconedys.ctg274                                    428933  5 +    630532 A--------GT---------AA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  32929  5 +     55795 A--------AT---------AA
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19535  5 -    143317 A--------AT---------AA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_307679                               11851  5 -     15490 A--------GT---------AA
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              53856  5 +     67168 A--------GT---------AA
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189537303  5 - 191637585 A--------GT---------AA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3330401  5 -  11177569 A--------GT---------AA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80627  1 +    135385 ---------------------A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514249  5 -   7955117 a--------at---------aa
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   17829  4 +     31101 A--------G----------AA
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22061  5 +     23964 A--------AC---------AA
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271037  5 -   9596543 a--------at---------at
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1328  5 -      3359 A--------AC---------AA
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6452 13 -     23766 A--------G-ATCTATTTCAA
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24399 13 +     45836 A--------G-ATCTATTTCAA
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31309 13 -     32627 A--------G-ATCTATTTCAA
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      22457 13 +     54090 A--------G-ATCTATTTCAA
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3035779  5 +   3914936 A--------AT---------AA
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     3266  5 -     14121 A--------AG---------AA
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 11
s Lipotes_vexillifer.KE559953.1                             267142  5 -    662738 A--------AC---------AA
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1431117  5 +   1826925 C--------AT---------AA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             354 13 +     11245 acctcctgggt---------ga
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999189 13 +   6120653 acctcctgggt---------ga
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214134  3 -  43346337 ----------T---------AA
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951391  5 -  59628241 A--------AT---------AA
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               1305  5 +     40492 C--------GT---------AA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670565  5 +  60120075 C--------GT---------AA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7063  5 -     26193 C--------GT---------AA
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            74854  5 -    114318 C--------GT---------AA
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   576  5 -     23192 C--------GT---------AA
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10025  5 -     29190 C--------GT---------AA
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18596  5 +     37952 C--------GT---------AA
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833684  5 + 187317192 C--------GT---------AA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452242  5 -  25927173 C--------GT---------AA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74445  5 +     89720 C--------GT---------AA
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1442  5 +     20474 C--------GT---------AA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1243  5 -     14993 C--------GT---------AA
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  323875  5 -    668171 C--------GT---------AA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15385  5 -     15935 C--------GT---------AA
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20181  5 -     45290 C--------GT---------AA
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23931735  5 -  24302211 C--------GT---------AA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               345915  5 +    752769 C--------GT---------AA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15265  4 +    737560 a--------a----------aa
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              46654  4 -    317179 a--------a----------aa
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097103  5 -  40650429 a--------at---------aa
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              5685  5 +     13704 A--------AT---------AA
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 225
s Meriones_unguiculatus.MerUng_scaffold_7390                 27923  5 +    140813 A--------AT---------AA
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12177965  5 -  29670104 A--------AT---------AA
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    2729  5 +     10310 A--------AC---------AA
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18282985  5 -  93316391 a--------a---------taa
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    15127  5 -    145209 A--------TG---------AA
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11256343  5 -  27267610 A--------AT---------AA
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3472  5 -     28506 C--------GT---------AA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62109  5 -     63350 A--------AT---------AA
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      4346  5 -     37649 A--------A--T-------AA
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26234  5 -    437263 G--------AC---------AA
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   24008  5 +     37127 A--------AT---------AA
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2025  5 +     14296 A--------GT---------AA
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               297332  5 -  14710649 A--------AT---------AA
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     70807  5 -     80779 A--------AT---------AA
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              185768  5 +    196477 A--------AT---------AT
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025187  5 -   3037898 A--------AT---------AA
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                                9485  5 +     21681 C--------GT---------AA
i Nasalis_larvatus.k141_413338                           C 0 I 1
s Neophocaena_asiaeorientalis.KZ687982.1                   5865190  5 +   7148211 A--------AC---------AA
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145656  5 -   9404916 A--------AT---------AA
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102574158 13 - 196305487 acctcctgggt---------ga
i Nycticebus_bengalensis.LG01                            I 4520 C 0
s Nycticebus_coucang.k141_5327727                             1844 13 +      8486 acctcctgggt---------ga
i Nycticebus_coucang.k141_5327727                        I 14 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744586 13 + 199412804 acctcctgggt---------ga
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 10921 C 0
s Odobenus_rosmarus.KB229312.1                              500394  5 -   2017862 a--------at---------aa
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   16683  5 +     28053 A--------AT---------GA
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    74786  5 +    102263 A--------AT---------AA
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2781105  5 -  10937097 A--------AC---------AA
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6488  5 -     18566 T--------AT---------AA
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67144120  5 + 174332312 A--------AG---------AA
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458406  5 -    559221 A--------AT---------AA
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Pan_paniscus.KQ411613.1                                    35870  5 +     80009 A--------GT---------AA
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189136820  5 + 189151597 A--------GT---------AA
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  140272  5 +    230217 A--------AT---------AA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                251801  5 +  18783137 A--------AT---------AA
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4710242  5 -   8748460 A--------AT---------AA
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183437057  5 + 183742232 C--------AT---------AA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1119  5 +     20448 C--------AT---------AA
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20557741  5 +  20919399 C--------AT---------AA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_4051466                                   1319  5 -      1598 C--------AT---------AA
i Papio_kindae.k141_4051466                              C 0 C 0
s Papio_papio.k141_802527                                     3151  5 +     27711 C--------AT---------AA
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  3140  5 +      9205 C--------AT---------AA
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      1071  5 -     78924 A--------AT---------AA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            4336 13 +     13100 ccctcctgggt---------ga
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             2704 13 +     25941 ccctcctgggt---------ga
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25041  1 +     32600 ---------------------A
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18187572  5 -  18517816 A--------AT---------AA
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25551  5 -     29689 A--------AT---------AA
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8152  5 +     63832 A--------AC---------AA
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38000  5 +     62158 C--------GT---------AA
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        32729  5 +     89929 C--------GT---------AA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34145  5 +     51399 C--------GT---------AA
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290364  5 -  14605196 C--------GT---------AA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           33864  5 +     35617 A--------AC---------AA
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189124905  5 + 189387572 A--------GT---------AA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9564748  5 +   9816681 A--------GT---------AA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               67641  5 -     81375 C--------GT---------AA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9465  5 +     10147 C--------GT---------AA
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9633  5 -     22811 C--------AT---------AA
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     985702  4 +   2598838 A--------G----------AA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          23990  4 +     38485 A--------G----------AA
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                              152  4 +      4256 A--------G----------AA
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          21510  4 +     35766 A--------G----------AA
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1630595                          16789  4 +     17239 A--------G----------AA
i Propithecus_perrieri.k141_1630595                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        23504  4 -     67325 A--------G----------AA
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_1019028                         13220  4 -     13615 A--------G----------AA
i Propithecus_verreauxi.k141_1019028                     C 0 C 0
s Psammomys_obesus.NESX01036370.1                             5557  5 -     21651 a--------at---------aa
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36353  5 +     42204 A--------AT---------AA
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Puma_concolor.QAVW01001104.1                            20262777  5 -  38429054 A--------AT---------AA
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                              9469  5 -     91421 C--------GT---------AA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603605  5 +   7812017 C--------GT---------AA
i Pygathrix_nigripes_b.ctg100                               C 0 I 1
s Pygathrix_nigripes_a.k141_215492                              9441  5 -     72585 A--------GT---------AA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr8                                 113028368  5 - 133307652 A--------AG---------AA
i Rattus_norvegicus.chr8                                 C 0 C 0
s Rhinopithecus_bieti.k119_217274                              855  5 -     11128 C--------GT---------AA
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230233  5 - 195417433 C--------GT---------AA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7665941  5 +   7961872 C--------GT---------AA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151060  5 -    313613 A--------GC---------AA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          13984  5 -     19888 C--------GT---------AA
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21190  5 +     39453 C--------GT---------AA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            1714  5 +     27826 C--------GT---------AA
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1234  5 -     19483 C--------GT---------AA
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1298  5 +      7198 C--------GT---------AA
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9556  5 +     15514 C--------GT---------AA
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187369  5 -    191337 A--------AT---------AA
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13646741  5 -  18376816 A--------Gc---------aa
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1947891  5 -   3870691 a--------at---------aa
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             26891  5 +     97271 A--------AT---------AA
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629               6844  5 -    196729 A--------AT---------AA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   62881877  4 -  69701581 ---------AT---------AA
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1087538  5 -   1523678 A--------GT---------AA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69128  5 +    116680 A--------AT---------AA
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      114867  5 -    156842 A--------GT---------AA
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383321  3 +    539355 ----------T---------AA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10315  5 +     70052 A--------GT---------AA
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               14620  5 +     25099 A--------GT---------AA
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422566  5 + 186847797 C--------GT---------AA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              102710  5 +    114563 A--------AT---------AA
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   1530  4 +      8208 ---------GT---------AA
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Trachypithecus_auratus.k141_722599                          5292  5 -     20410 C--------GT---------AA
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9486  5 +     15221 C--------GT---------AA
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5392  5 +     19930 C--------GT---------AA
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       1820  5 -     19997 C--------GT---------AA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            41940  5 -     60166 C--------GT---------AA
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9413  5 -     27529 C--------GT---------AA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9349  5 -     18194 C--------GT---------AA
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3088  5 -     21137 C--------GT---------AA
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    1788  5 -     10723 C--------GT---------AA
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                          944  5 +      9834 C--------GT---------AA
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19258  5 +     32220 C--------GT---------AA
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933356  5 +   6242583 C--------GT---------AA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2602  5 +     20839 C--------GT---------AA
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_124071                    574  5 -      2171 A--------AT---------CA
i Tragulus_javanicus.TraJav_scaffold_124071              C 0 I 236
s Trichechus_manatus.JH594705.1                            4292051  5 +  10818551 a--------at---------aa
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2149256  1 +   4065304 ---------------------A
i Tupaia_chinensis.KB320699.1                            I 1 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     2878  1 -     10553 ---------------------A
i Tupaia_tana.TupTan_flattened_line_97126                I 1 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737352  5 +  33153633 A--------AC---------AA
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   51192  5 -     77625 T--------AT---------AA
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4846589  5 -   5085361 A--------AT---------AA
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368051  5 -   5488506 a--------at---------aa
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7067  5 -     43706 A--------AT---------AA
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19387  5 -     24430 A--------AT---------AA
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1517  5 +      2932 A--------AT---------AA
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9677  5 +     63895 A--------AT---------AA
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11044  5 +     12536 A--------AC---------AA
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Tonatia_saurophila.TonSau_scaffold_294                     78646  0 +    610378 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                 6499  0 +     41958 C
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Saiga_tatarica.SaiTat_scaffold_373180                       3225 222 +      4321 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                84359  0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        366601  0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4576 218 +     55207 I
e Pteropus_vampyrus.KN534172.1                                1313  0 -      8028 C
e Pteropus_alecto.KB030862.1                              22973377  0 +  28871421 C
e Pteronotus_parnellii.KE909381.1                            10884  0 -     21811 C
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Pipistrellus_pipistrellus.PipPip_scaffold_7723             79055  0 +     79650 C
e Pantholops_hodgsonii.KE114653.1                          1264036 222 -   2937107 I
e Ovis_canadensis.OviCan_scaffold_2572                      173103 222 -    191736 I
e Ovis_aries.CM001607.2                                   17584682 222 +  44047080 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144328 218 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1355292  2 +   3988456 I
e Noctilio_leporinus.NocLep_scaffold_251                    756064  0 +    783361 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myotis_myotis.MyoMyo_scaffold_28916                        32034  0 +     33610 C
e Myotis_lucifugus.GL429869.1                              3901485  0 -   4330536 C
e Myotis_davidii.KB100139.1                                1585268  0 -   6019432 C
e Myotis_brandtii.KE162005.1                                277697  0 -  10118263 C
e Murina_feae.MurFea_scaffold_85699                           4589  0 +     14753 C
e Moschus_moschiferus.MosMos_scaffold_61429                  27091 222 -     27816 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 137505  0 -    366855 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             32400  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1848531  0 +   8254450 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                13101  0 -     19307 C
e Megaderma_lyra.MegLyr_scaffold_4542                         6499  0 -    207569 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 87246  0 +     94391 C
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    11579  0 -     42476 C
e Hipposideros_galeritus.HipGal_scaffold_29171               39492  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       108053  0 +   1711038 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17151 222 +     36099 I
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Erinaceus_europaeus.JH835339.1                           3320455  0 -   7059049 C
e Eptesicus_fuscus.JH977646.1                              2143440  0 -  14770903 C
e Elephantulus_edwardii.JH947257.1                         1088668  0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       309953 220 +    607251 I
e Eidolon_helvum.KE759718.1                                   7104  0 +     11740 C
e Desmodus_rotundus.KZ672289.1                             8627590  0 +  20541912 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          10178  0 -     20389 C
e Carollia_perspicillata.CarPer_scaffold_92756                2559  0 -     11696 C
e Capra_hircus.CM004588.1                                 18059667 222 -  44709034 I
e Capra_aegagrus.CM003241.1                               18828947 222 +  46296322 I
e Bubalus_bubalis.KI419123.1                               2818124 220 +   4408762 I
e Bos_taurus.CM000203.6                                   18082634 220 +  45695690 I
e Bos_mutus.JH880303.1                                     1124552 224 -   1948126 I
e Bos_indicus.CM003047.1                                  20271996 220 +  48749331 I
e Bison_bison.KN261452.1                                    198791 220 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    25751 222 +     34529 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  2141  0 +     43469 C
e Aplodontia_rufa.AprRuf_scaffold_68852                       6920  0 +     20879 C
e Antilocapra_americana.AntAmePen_scaffold_12469             97280 223 -    100397 I
e Anoura_caudifer.AnoCau_scaffold_1412                      182789  0 +    412891 C
e Ammotragus_lervia.NIVO01071767.1                          674829 222 -   2318259 I

a score=0.000000
s hg38.chrUn_KI270753v1                                        513 21 +     62944 A----T------C--TCTGAA------A----A-CC--CAT----TCA-AG
s Acinonyx_jubatus.LLWD01001279.1                           816633 21 -   1699592 A----T------C--CCTGAA------A----A-TC--CAT----TCA-CA
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     66393  8 +     87051 A----T------T--CCTGG-------------------------------
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 14
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506594 21 -  29979442 A----T------C--CCTGAA------A----A-TC--CAT----TCA-AG
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 13
s Ailurus_fulgens.LNAC01001112.1                             74885 21 -    347723 A----T------C--CCTGAA------A----A-TC--CAT----TCA-AG
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 13
s Allactaga_bullata.AllBul_scaffold_9566                     64680 11 -     89534 A----T------C--CCCAAT------A----A------------------
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 6
s Allenopithecus_nigroviridis.k141_3361533                    8986 21 -     52922 A----T------C--TCTGAA------A----T-TC--CAT----TCA-AG
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          8911 21 -     28001 A----T------C--TCTGAA------A----T-TC--CAT----TCA-AG
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9037 21 -      9772 A----T------C--TCTGAA------A----T-TC--CAT----TCA-AG
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            194 21 -     12518 A----T------C--TCTGAA------A----T-TC--CAT----TCA-AG
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      182789 17 +    412891 ----------------CTGAA------A----A-TC--CAT----TTA-AG
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       6920 15 +     20879 A----T------C--CCCAAG------ATTCAA------------------
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 6
s Arctocebus_calabarensis.k141_288239                        14116 29 +     17124 agggct------caacttgga------c----t-ttacccg----aca-aa
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2141 17 +     43469 ----------------CTGAA------A----A-TC--CAT----TTA-AG
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  48976 21 -     92717 A----T------C--CTTAAA------A----A-TT--CAT----TCA-GG
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              49601 21 +     85213 A----T------C--CTTAAA------A----A-TT--CAT----TCA-GG
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191213 21 +  23207421 A----T------T--CCTGAA------A----A-TC--CAT----TCA-AG
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         1679 21 -     18090 A----T------T--CCTGAA------A----A-TC--CAT----TCA-AG
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998567 21 -  17673402 a----t------C--CCTGAA------A----A-TC--CAT----TCA-AG
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331031 21 -   7040546 a----t------C--CCTGAA------A----A-TC--CAT----TCA-AG
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399307 21 -   1652518 a----t------C--CCTGAA------A----A-TC--CAT----TCA-AG
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795449 21 -  60362399 A----T------C--CCTGGA------A----A-TC--TAT----TCA-AG
i CanFam4.chr16                                          C 0 I 13
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181505 21 -    185531 A----T------C--CCTGGA------A----A-TC--TAT----TCA-AG
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 I 13
s Canis_lupus_dingo.QKWQ01000480.1                         9030892 21 -   9314153 a----t------C--CCTGGA------A----A-TC--TAT----TCA-AG
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 13
s Canis_lupus_familiaris.chr16                            17955156 21 -  59632846 a----t------C--CCTGGA------A----A-TC--TAT----TCA-AG
i Canis_lupus_familiaris.chr16                           C 0 I 13
s Canis_lupus_orion.HG994398.1                            18496460 21 +  63665305 A----T------C--CCTGGA------A----A-TC--TAT----TCA-AG
i Canis_lupus_orion.HG994398.1                           C 0 I 13
s Capromys_pilorides.CapPil_scaffold_65020                     626 17 -     12242 A----T------C--TCTAAGGAAAAAA----A------------------
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 6
s Carlito_syrichta.NW_007259797.1                           140702 21 -    496798 A----C------C--CCAGAA------A----A-TC--TAT----TT-AAG
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2559 17 -     11696 ----------------CTGAA------A----A-TC--CAT----TTA-AG
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133321 11 +    179628 A----T------T--CCTTAT------A----A------------------
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 10
s Catagonus_wagneri.CatWag_scaffold_2839                     88643 23 +    217609 A----T------C--CCTGAA-AA---A----G-TC--CAA----TCA-CA
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 261
s Cavia_aperea.AVPZ01000300.1                             18347161 15 -  23392119 a----a------c--cctaAG-AAAA-A----A------------------
i Cavia_aperea.AVPZ01000300.1                            C 0 I 6
s Cavia_porcellus.DS562891.1                              18359421 15 -  23407841 a----a------c--cctaAG-AAAA-A----A------------------
i Cavia_porcellus.DS562891.1                             C 0 I 6
s Cavia_tschudii.CavTsc_scaffold_8919                        98296 15 +    143979 A----A------C--CCTAAG-AAAA-A----A------------------
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 I 6
s Cephalopachus_bancanus.k141_2037105                         4620 20 -      8605 A----C------C--CCAGAA------A----A-TC--TAT----TT--AG
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227541 21 +  27778364 A----T------C--GCTGAA------A----A-TC--CAT----TCA-AG
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2259 21 -      3715 A----T------C--GCTGAA------A----A-TC--CAT----TCA-AG
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4469955 21 +   4669795 A----T------T--TCTGAA------A----T-TC--CAT----TCA-AG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8504 21 -     19203 A----T------C--TCTGAA------A----T-TC--CAT----TCA-AG
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           2923 21 +      8260 A----T------T--TCTGAA------A----T-TC--CAT----TCA-AG
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3153 21 +     27781 A----T------C--TCTGAA------A----T-TC--CAT----TCA-AG
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3299 21 -     20310 A----T------C--TCTGAA------A----T-TC--CAT----TCA-AG
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6283 21 +     29689 A----T------C--TCTGAA------A----T-TC--CAT----TCA-AG
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             636 21 +      9989 A----T------C--TCTGAA------A----T-TC--CAT----TCA-AG
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           8971 21 -     27936 A----T------C--TCTGAA------A----T-TC--CAT----TCA-AG
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             8990 21 -     11289 A----T------C--TCTGAA------A----T-TC--CAT----TCA-AG
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811366 21 +  39242232 A----T------C--TCTGAA------A----T-TC--CAT----TCA-AG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217057 21 -  21565898 A----T------C--TCTGAA------A----T-TC--CAT----TCA-AG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34177 21 -     53127 A----T------C--TCTGAA------A----T-TC--CAT----TCA-AG
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1469 21 +      7159 A----T------C--TCTGAA------A----T-TC--CAT----TCA-AG
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        8982 21 -     27947 A----T------C--TCTGAA------A----T-TC--CAT----TCA-AG
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          8958 21 +     17596 A----T------C--TCTGAA------A----T-TC--CAT----TCA-AG
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39452 21 -     41420 A----T------C--TCTGAA------A----T-TC--CAT----TCA-AG
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4478 20 -      6351 A----T------C--CCTGGA------A----A-TC--TGT----TCA-A-
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16401 21 -     52598 A----T------C--CTTGAA------A----A-TT--CAT----TCA-GG
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           11750 21 +     57038 A----T------C--CTTGAA------A----A-TT--CAT----TCA-GG
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1248191 15 +   2543920 A----t------c--cttaag--aaaaa----a------------------
i Chinchilla_lanigera.JH722012.1                         C 0 I 6
s Chlorocebus_aethiops.ctg25                              18422921 21 -  18827391 A----T------C--TCTGAA------A----T-TC--CAT----TCA-AG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9364 21 -     50209 A----T------C--TCTGAA------A----T-TC--CAT----TCA-AG
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416369 21 + 135778131 A----T------C--TCTGAA------A----T-TC--CAT----TCA-AG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 14811 13 +     19366 A----T------C--CCTGGA------A----A-AT---------------
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 I 2
s Choloepus_hoffmanni.KN194906.1                            169906 13 +    839153 A----T------C--CCTGGA------A----A-AT---------------
i Choloepus_hoffmanni.KN194906.1                         C 0 I 2
s Chrysochloris_asiatica.ChrAsi_scaffold_172426               8907 21 -     10935 A----T------C--CTTGGA------A----A-TC--CAT----TCA-AG
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          C 0 C 0
s Colobus_angolensis.KN981557.1                            1904889 21 +   2368649 A----T------G--TCTGAA------A----C-TC--CAT----TCA-AG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944507 21 + 200372422 A----T------G--TCTGAA------A----C-TC--CAT----TCA-AG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31401 21 +     84244 A----T------C--TCTGAA------A----C-TC--CAT----TCA-AG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545649 21 -  53390261 a----t------c--cttgaa------a----A-GT--CAG----TCA-AG
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10178 14 -     20389 -------------------AA------A----A-TC--CAT----TAA-AG
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 46638  8 +     63868 A----T------C--CCTGG-------------------------------
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 14
s Cricetulus_griseus.LT883664.1                           11663623  8 + 224834208 A----T------C--CCTAG-------------------------------
i Cricetulus_griseus.LT883664.1                          C 0 I 15
s Crocidura_indochinensis.CroInd_scaffold_603213               789 21 +      1923 A----T------C--TTTATA------A----A-GC--CAT----TCT-AG
i Crocidura_indochinensis.CroInd_scaffold_603213         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             17652 21 -     87169 A----T------C--CCTGAA------A----A-TC--CAG----TCA-CA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 13
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35327 16 +     51376 A----T------C--CCTAAG-AATAAA----A------------------
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 6
s Cuniculus_paca.CunPac_flattened_line_231100                 2536 15 +      5455 A----T------G--CCTAAG-AAAA-A----A------------------
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 I 6
s Dasyprocta_punctata.DasPun_flattened_line_206793             929 13 +      3576 A----T------G--CCTAA--AAA--A----A------------------
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 I 6
s Dasypus_novemcinctus.JH564415.1                            60726 20 +   2246927 A----T------C--CCTGGA------C----A-TC--CAT----TCA-A-
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532571 21 -  12879189 A----T------C--CTTGAA------A----A-TT--CAT----TCA-GA
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16810849 21 +  35494412 A----T------T--CCTGAA------A----A-TC--CAT----TCA-AG
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8627590 17 +  20541912 ----------------CTGAA------A----A-TC--CAT----TTA-AG
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669073 21 +   1390856 A----T------C--GCTGAA------A----A-TC--CAT----TCA-AG
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2148 21 +    198055 A----T------C--GCTGAA------A----A-TC--CAT----TCA-AG
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    33988 15 +     67921 A----T------C--CTTAAG-AAAA-A----A------------------
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 6
s Dipodomys_ordii.KN672350.1                              18895489 11 +  37912305 A----T------T--CCTGAT------A----A------------------
i Dipodomys_ordii.KN672350.1                             C 0 I 10
s Dipodomys_stephensi.DipSte_scaffold_75855                  11698 11 +     14536 A----T------T--CCTGAT------A----A------------------
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 I 10
s Dolichotis_patagonum.DolPat_scaffold_30833                 31182 15 -     42551 A----A------C--CTTAAG-AAAA-A----G------------------
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 I 6
s Eidolon_helvum.KE759718.1                                   7104 16 +     11740 ----------------CT-AA------A----A-TC--CAT----CCA-AG
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1088668 17 +  10337057 ---------------tctATA------A----A-TC--CAT----T-A-CA
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          12430  8 -    110024 A----T------C--CCTAG-------------------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 15
s Ellobius_talpinus.LOJH01123422.1                            3380  8 +      5358 A----T------C--CCTAG-------------------------------
i Ellobius_talpinus.LOJH01123422.1                       C 0 I 15
s Enhydra_lutris.KZ291758.1                               16325450 21 -  41312741 A----T------C--CCTGAA------A----A-TC--CAT----TCA-AG
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2143440 17 -  14770903 ----------------CTGAA------A----A-TC--CAT----TCA-AG
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279415 21 +   4378816 a----t------c--gCTGAA------A----A-TC--CAT----TCA-AG
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527236 21 -  39960074 a----t------c--gCTGAA------A----A-TC--CAT----TCA-AG
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29251 21 +    498745 a----t------c--gCTGAA------A----A-TC--CAT----TCA-AG
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3320455 18 -   7059049 ------------a--cctgaa------a----a-tc--CAT----gca-a-
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21199600 21 -  21539334 A----T------C--TCTGAA------A----T-TC--CAT----TCA-AG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10525 21 +    133382 A----T------T--CCTGAA------A----G-TC--CAT----TCA-AG
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24463 21 -     44125 A----T------T--CCTGAA------A----A-TC--CAT----TCA-AG
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.KN305074.1                                       297 21 -      2052 A----T------C--CCTGAA------A----A-TC--CAT----TCA-CA
i Felis_catus.KN305074.1                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20185063 21 + 205367284 A----T------C--CCTGAA------A----A-TC--CAT----TCA-CA
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_125938                10177 21 -     11347 A----T------C--CCTGAA------A----A-TC--CAT----TCA-CA
i Felis_nigripes.FelNig_flattened_line_125938            C 0 C 0
s Fukomys_damarensis.KN121974.1                             848205 15 +   3816255 a----t------c--cctaag--aaaaa----a------------------
i Fukomys_damarensis.KN121974.1                          C 0 I 6
s Galagoides_demidoff.k141_31856                              2602 21 -      3432 A----T------T--TTTAAA------A----T-TT--CAC----CCA-GT
i Galagoides_demidoff.k141_31856                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25115 21 +     26054 A----T------C--TCTGAA------A----A-TC--CAT----CCA-AG
i Galeopterus_variegatus.GalVar_scaffold_56069           I 1 C 0
s Glis_glis.GliGli_scaffold_19807                            30038 11 +     49224 A----C------C--CCTGAG------A----T------------------
i Glis_glis.GliGli_scaffold_19807                        C 0 I 1
s Gorilla_beringei.k141_3596273                               9951 21 -     32273 A----T------C--TCTGAA------A----A-CC--CAT----TCA-AG
i Gorilla_beringei.k141_3596273                          C 0 I 11
s Gorilla_gorilla.LT578341.1                             186332104 21 + 186649187 A----T------C--TCTGAA------A----A-CC--CAT----TCA-AG
i Gorilla_gorilla.LT578341.1                             C 0 I 11
s Graphiurus_murinus.GraMur_scaffold_10447                   29760 11 +     78134 A----T------T--CCTGAT------A----T------------------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 6
s Helogale_parvula.HelPar_flattened_line_2585               230822 21 +    327341 A----T------C--CCTGAA------A----A-TC--CAT----TCA-CA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 13
s Heterocephalus_glaber.JH602082.1                        20659089 15 +  22651954 A----T------C--CCTAAG-AAAA-A----A------------------
i Heterocephalus_glaber.JH602082.1                       C 0 I 6
s Heterohyrax_brucei.HetBruBak_scaffold_173205                3030 21 -      3357 A----T------C--CCTGGA------A----A-TC--CAT----TCC-AG
i Heterohyrax_brucei.HetBruBak_scaffold_173205           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111705 21 +    128679 A----T------T--CCAGAA------A----A-TC--CAT----TCA-AG
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108053 14 +   1711038 -------------------AA------A----A-TT--CAT----TCA-AG
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39492 14 +     43066 -------------------AA------A----A-TT--CAT----TCA-AG
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    428938 21 +    630532 A----T------C--TCTGAA------A----A-CC--CAT----TCA-AG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  32934 21 +     55795 A----T------C--CCTGAA------A----A-TC--CAT----TCA-CA
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19540 15 -    143317 A----A------C--CCTAAG-AAAA-A----A------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 6
s Hylobates_agilis.k141_307679                               11856 21 -     15490 A----T------C--TCTGAA------A----A-CC--CAT----TCA-AG
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              53861 21 +     67168 A----T------C--TCTGAA------A----A-CC--CAT----TCA-AG
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189537308 21 - 191637585 A----T------C--TCTGAA------A----A-CC--CAT----TCA-AG
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3330406 21 -  11177569 A----T------C--TCTGAA------A----A-CC--CAT----TCA-AG
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80628 15 +    135385 A----T------C--CCTAGG-AAAA-A----A------------------
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 6
s Ictidomys_tridecemlineatus.JH393364.1                    7514254 15 -   7955117 a----t------c--cCTGAT------TATCAG------------------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 6
s Indri_indri.k141_3655594                                   17833 21 +     31101 A----T------C--CTTGAA------A----A-TT--CAT----TCA-GG
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22066 21 +     23964 A----T------T--CCTGAA------A----A-TC--CAT----TCA-AG
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271042 11 -   9596543 a----t------c--cCCAAG------A----A------------------
i Jaculus_jaculus.JH725527.1                             C 0 I 6
s Kogia_breviceps.KogBre_flattened_line_192630                1333 21 -      3359 A----T------T--CCTGAA------A----A-TC--CAT----TCA-AG
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    11579 17 -     42476 ----------------CCGAA------A----A-TC--CAT----TCA-AG
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6465 21 -     23766 A----T------C--CTTGAA------A----A-TT--CAT----TCA-GG
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24412 21 +     45836 A----T------C--CTTGAA------A----A-TT--CAT----TCA-GG
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31322 21 -     32627 A----T------C--CTTGAA------A----A-TT--CAT----TCA-GG
i Lepilemur_ruficaudatus.k141_420445                     C 0 I 27
s Lepilemur_septentrionalis.k141_185316                      22470 21 +     54090 A----T------C--CTTGAA------A----A-TT--CAT----TCA-GG
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3035784 21 +   3914936 A----T------C--CCTAAA------A----C-TC--CAT----TCA-AG
i Leptonychotes_weddellii.KB714746.1                     C 0 I 13
s Lepus_americanus.LepAme_scaffold_107385                     3282 10 -     14121 ----------------------------------------TCTATTCA-AG
i Lepus_americanus.LepAme_scaffold_107385                I 11 C 0
s Lipotes_vexillifer.KE559953.1                             267147 21 -    662738 A----T------T--CCTGAA------A----A-TC--CAT----TCA-AG
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1431122 21 +   1826925 A----T------C--TCTGAA------A----T-TC--CAT----TCA-AG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             367 35 +     11245 agggctcaactacaacttgaa------c----t-ttaccgt----aca-aa
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999202 35 +   6120653 agggctcaactacaacttgaa------c----t-ttaccgt----aca-aa
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214137 21 -  43346337 A----T------C--CCTGGA------A----A-TC--TAT----TCA-AG
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951396 21 -  59628241 A----T------C--CCTGGA------A----A-TC--TAT----TCA-AG
i Lycaon_pictus.CM007581.1                               C 0 I 13
s Macaca_arctoides.k141_2326796                               1310 21 +     40492 A----T------C--TCTGAA------A----T-TC--CAT----TCA-AG
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670570 21 +  60120075 A----T------C--TCTGAA------A----T-TC--CAT----TCA-AG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7068 21 -     26193 A----T------C--TCTGAA------A----T-TC--CAT----TCA-AG
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            74859 21 -    114318 A----T------C--TCTGAA------A----T-TC--CAT----TCA-AG
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   581 21 -     23192 A----T------C--TCTGAA------A----T-TC--CAT----TCA-AG
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10030 21 -     29190 A----T------C--TCTGAA------A----T-TC--CAT----TCA-AG
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18601 21 +     37952 A----T------C--TCTGAA------A----T-TC--CAT----TCA-AG
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833689 21 + 187317192 A----T------C--TCTGAA------A----T-TC--CAT----TCA-AG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452247 21 -  25927173 A----T------C--TCTGAA------A----T-TC--CAT----TCA-AG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74450 21 +     89720 A----T------C--TCTGAA------A----T-TC--CAT----TCA-AG
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1447 21 +     20474 A----T------C--TCTGAA------A----T-TC--CAT----TCA-AG
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1248 21 -     14993 A----T------C--TCTGAA------A----T-TC--CAT----TCA-AG
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  323880 21 -    668171 A----T------C--TCTGAA------A----T-TC--CAT----TCA-AG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15390 21 -     15935 A----T------C--TCTGAA------A----T-TC--CAT----TCA-AG
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20186 21 -     45290 A----T------C--TCTGAA------A----T-TC--CAT----TCA-AG
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87246 17 +     94391 ----------------CT-AA------A----ACTC--CAT----CCA-AG
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23931740 21 -  24302211 A----T------C--TCCGAA------A----T-TC--CGT----TCA-AG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               345920 21 +    752769 A----T------C--TCTGAA------A----T-TC--CAT----TCA-AG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15269 21 +    737560 a----t------c--ccacaa------a----a-tc--TAT----TCA-GG
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              46658 21 -    317179 a----t------c--ccacaa------a----a-tc--TAT----TCA-GG
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097108 15 -  40650429 a----t------c--CCTGAT------TATCAA------------------
i Marmota_marmota.CZRN01000018.1                         C 0 I 6
s Megaderma_lyra.MegLyr_scaffold_4542                         6499 14 -    207569 -------------------AA------A----A-TC--CAT----TCA-AG
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              5915 21 +     13704 A----T------C--CCTGAA------A----A-TC--CAT----TCA-AG
i Mellivora_capensis.MelCap_flattened_line_69365         I 225 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 27928  8 +    140813 G----T------C--CCTGG-------------------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 14
s Mesocricetus_auratus.KB708134.1                         12177970  8 -  29670104 A----T------C--CCCAG-------------------------------
i Mesocricetus_auratus.KB708134.1                        C 0 I 15
s Mesoplodon_bidens.MesBid_scaffold_108144                    2734 21 +     10310 A----T------T--CCTGAA------A----A-TC--CAT----TTA-AG
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18282990 21 -  93316391 a----t------c--tttgaa------a----a-cT--CAT----TCA-GG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    15132 21 -    145209 A----T------C--CCTGGA------A----A-TC--CAT----TTA-AG
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13101 17 -     19307 ----------------CTGAA------A----A-TC--CAT----TTA-AG
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11256348  8 -  27267610 A----T------C--CCTAG-------------------------------
i Microtus_ochrogaster.CM001695.1                        C 0 I 15
s Miniopterus_natalensis.LDJU01000034.1                    1848531 17 +   8254450 ----------------CTGAA------A----A-TC--CAT----TCA-AG
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32400 17 +     64694 ----------------CTGAA------A----A-TC--CAT----TCA-AG
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3477 21 -     28506 A----T------C--TCTGAA------A----T-TC--CAT----TCA-AG
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62114 21 -     63350 A----T------C--CCTAAA------A----C-TC--TAC----TCA-AG
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 I 13
s Mirza_zaza.k141_952172                                      4351 21 -     37649 A----T------C--TTTGAA------A----A-CT--CAT----TCA-GG
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26239 21 -    437263 A----T------T--CCTGAA------A----A-TC--CAT----TCA-AG
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137505 17 -    366855 ----------------CTGAA------A----A-TC--CAT----TTA-AG
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   24013 21 +     37127 A----T------C--CCTGAA------A----A-TC--CAT----TCA-CA
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 13
s Murina_feae.MurFea_scaffold_85699                           4589 17 +     14753 ----------------CTGAA------A----A-TC--CAT----TCA-AG
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2030 11 +     14296 A----T------C--CCTGAT------A----C------------------
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 6
s Mustela_putorius.JH418006.1                               297337 21 -  14710649 A----T------C--CCTGAA------A----A-TC--CAT----TCA-TG
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     70812 16 -     80779 A----T------C--CTTAAG-AAAAAA----A------------------
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 I 6
s Myotis_brandtii.KE162005.1                                277697 17 -  10118263 ----------------CTGAA------A----A-TC--CAT----TCA-AG
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585268 17 -   6019432 ----------------CTGAA------A----A-TC--CAT----TCA-AG
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3901485 17 -   4330536 ----------------CTGAA------A----A-TC--CAT----TCA-AG
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32034 17 +     33610 ----------------CTGAA------A----A-TC--CAT----TCA-AG
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              185773 13 +    196477 A----T------T--CCTGAA------A----A-TC---------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 I 2
s Nannospalax_galili.KL204047.1                            2025192 11 -   3037898 A----T------C--CCTGAT------A----A------------------
i Nannospalax_galili.KL204047.1                          C 0 I 5
s Nasalis_larvatus.k141_413338                                9491 18 +     21681 ---------------TCTGAA------A----T-TG--CAT----TCA-AG
i Nasalis_larvatus.k141_413338                           I 1 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865195 21 +   7148211 A----T------T--CCTGAA------A----A-TC--CAT----TCA-AG
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756064 17 +    783361 ----------------CTGAA------A----A-TT--CAT----TTA-CG
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145661 21 -   9404916 A----T------C--CCTGGA------A----A-TC--TAT----TCA-AG
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102574171 35 - 196305487 agggctcaactacaacttgaa------c----t-ttaccat----aca-aa
i Nycticebus_bengalensis.LG01                            C 0 T 4542
s Nycticebus_coucang.k141_5327727                             1857 35 +      8486 agggctcaactacaacttgaa------c----t-ttaccat----aca-aa
i Nycticebus_coucang.k141_5327727                        C 0 I 23
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744599 35 + 199412804 agggctcaactacaacttgaa------c----t-ttaccaT----aca-aa
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 T 10943
s Odobenus_rosmarus.KB229312.1                              500399 21 -   2017862 a----t------t--cttaaa------a----c-tc--CAT----TCA-AG
i Odobenus_rosmarus.KB229312.1                           C 0 I 13
s Ondatra_zibethicus.OndZib_scaffold_46174                   16688  8 +     28053 A----T------C--CCTAG-------------------------------
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 15
s Onychomys_torridus.OnyTor_scaffold_2986                    74791  8 +    102263 A----C------C--CCTAG-------------------------------
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 15
s Orcinus_orca.KB316932.1                                  2781110 21 -  10937097 A----T------T--CCTGAA------A----A-TC--CAT----TCA-AG
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6493 21 -     18566 C----T------C--CCTGGA------A----A-TA--TAT----TCA-CA
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67144125 11 + 174332312 A----A------C--CCTGAA------A----A------------------
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 10
s Otocyon_megalotis.JAEUCK010005147.1                       458411 21 -    559221 A----T------C--CCTGGA------A----A-TC--TAT----TCA-AG
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Pan_paniscus.KQ411613.1                                    35875 21 +     80009 A----T------C--TCTGAA------A----A-CC--CAT----TCA-AG
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189136825 21 + 189151597 A----T------C--TCTGAA------A----A-CC--CAT----TCA-AG
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  140277 21 +    230217 A----T------C--CCTGAA------A----A-TC--CAT----TCA-CA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                251806 21 +  18783137 A----T------C--CCTGAA------A----A-TC--CAT----TCA-CA
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4710247 21 -   8748460 A----T------C--CCTGAA------A----A-TC--CAT----TCA-CA
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183437062 21 + 183742232 A----T------C--TCTGAA------A----T-TC--CAT----TTA-AG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1124 21 +     20448 A----T------C--TCTGAA------A----T-TC--CAT----TTA-AG
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20557746 21 +  20919399 A----T------C--TCTGAA------A----T-TC--CAT----TTA-AG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_4051466                                   1324 21 -      1598 A----T------C--TCTGAA------A----T-TC--CAT----TTA-AG
i Papio_kindae.k141_4051466                              C 0 C 0
s Papio_papio.k141_802527                                     3156 21 +     27711 A----T------C--TCTGAA------A----T-TC--CAT----TTA-AG
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  3145 21 +      9205 A----T------C--TCTGAA------A----T-TC--CAT----TTA-AG
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      1076 21 -     78924 G----T------C--CCTGAA------A----A-TC--CAT----TCA-CA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            4349 29 +     13100 agggct------caacttgga------c----t-ttaCccg----aca-aa
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             2717 29 +     25941 agggct------caacttgga------c----t-ttacccg----aca-aa
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25042 11 +     32600 A----T------C--CCTGAT------A----A------------------
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 I 10
s Peromyscus_maniculatus.KI615324.1                       18187577  8 -  18517816 A----C------C--CCTAG-------------------------------
i Peromyscus_maniculatus.KI615324.1                      C 0 I 15
s Petromus_typicus.PetTyp_scaffold_42190                     25556 15 -     29689 A----T------C--CTTAAG-AAAA-A----A------------------
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 I 6
s Phocoena_phocoena.PhoPho_flattened_line_24159               8157 21 +     63832 A----T------T--CCTGAA------A----A-TC--CAT----TCA-AG
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38005 21 +     62158 A----T------C--TCTGAA------A----T-TC--CAT----TCA-AG
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        32734 21 +     89929 A----T------C--TCTGAA------A----T-TC--CAT----TCA-AG
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34150 21 +     51399 A----T------C--TCTGAA------A----T-TC--CAT----TCA-AG
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290369 21 -  14605196 A----T------C--TCTGAA------A----T-TC--CAT----TCA-AG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_7723             79055 17 +     79650 ----------------CTGAA------A----A-TC--CAT----TCA-AG
i Pipistrellus_pipistrellus.PipPip_scaffold_7723         C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           33869 21 +     35617 A----T------T--CCTGAA------A----A-TC--CAT----TCA-AG
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189124910 21 + 189387572 A----T------C--TCTGAA------A----A-CC--GAT----TCA-AG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9564753 21 +   9816681 A----T------C--TCTGAA------A----A-CC--GAT----TCA-AG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               67646 21 -     81375 A----T------C--TCTGAA------A----T-TG--CAT----TCA-AG
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9470 21 +     10147 A----T------C--TCTGAA------A----T-TG--CAT----TCA-AG
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9638 21 -     22811 A----T------C--CCTGGA------A----A-TC--AAT----TCC-AG
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     985706 21 +   2598838 A----T------C--CTTAAA------A----A-TT--CAT----TCA-GG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          23994 21 +     38485 A----T------C--CTTAAA------A----A-TT--CAT----TCA-GG
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                              156 21 +      4256 A----T------C--CTTAAA------A----A-TT--CAT----TCA-GG
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          21514 21 +     35766 A----T------C--CTTAAA------A----A-TT--CAT----TCA-GA
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1630595                          16793 21 +     17239 A----T------C--CTTAAA------A----A-TT--CAT----TCA-GG
i Propithecus_perrieri.k141_1630595                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        23508 21 -     67325 A----T------C--CTTAAA------A----A-TT--CAT----TCA-GG
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_1019028                         13224 21 -     13615 A----T------C--CTTAAA------A----A-TT--CAT----TCA-GG
i Propithecus_verreauxi.k141_1019028                     C 0 C 0
s Psammomys_obesus.NESX01036370.1                             5562  8 -     21651 a----t------c--ccTGG-------------------------------
i Psammomys_obesus.NESX01036370.1                        C 0 I 14
s Pteronotus_parnellii.KE909381.1                            10884 17 -     21811 ----------------CTGAA------A----A-TC--CAT----TTA-AG
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36358 21 +     42204 A----T------C--CCTGAA------A----A-TC--CAT----TCA-AG
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973377 16 +  28871421 ----------------CT-AA------A----A-AC--CAT----CCA-AG
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1313 16 -      8028 ----------------CT-AA------A----A-AC--CAT----CCA-AG
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20262782 21 -  38429054 A----T------C--CCTGAA------A----A-TC--CAT----TCA-CA
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                              9474 21 -     91421 A----T------C--TCTGAA------A----T-TG--CAT----TCA-AG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603611 18 +   7812017 ---------------TCTGAA------A----T-TG--CAT----TCA-AG
i Pygathrix_nigripes_b.ctg100                               I 1 C 0
s Pygathrix_nigripes_a.k141_215492                              9446 21 -     72585 A----T------C--TCTGAA------A----T-TG--CAT----TCA-AG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr8                                 113028373  8 - 133307652 A----T------T--CTTAT-------------------------------
i Rattus_norvegicus.chr8                                 C 0 I 14
s Rhinolophus_sinicus.LVEH01000134.1                        366601 14 -   3329780 -------------------AA------A----A-TC--CAT----TCA-AG
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                              860 21 -     11128 A----T------C--TCTGAA------A----T-TG--CAT----TCA-AG
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230238 21 - 195417433 A----T------C--TCTGAA------A----T-TG--CAT----TCA-AG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7665946 21 +   7961872 A----T------C--TCTGAA------A----T-TG--CAT----TCA-AG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84359 17 -     96226 ----------------CT-AA------A----AATC--CAT----CCA-AG
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151065 21 -    313613 A----T------C--CCTTAC------A----A-GT--CAG----TCA-AG
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          13989 21 -     19888 A----T------C--TCTGAA------A----T-TG--CAT----TCA-AG
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21195 21 +     39453 A----T------C--TCTGAA------A----T-TG--CAT----TCA-AG
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            1719 21 +     27826 A----T------C--TCTGAA------A----T-TG--CAT----TCA-AG
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1239 21 -     19483 A----T------C--TCTGAA------A----T-TG--CAT----TCA-AG
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1303 21 +      7198 A----T------C--TCTGAA------A----T-TG--CAT----TCA-AG
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9561 21 +     15514 A----T------C--TCTGAA------A----T-TG--CAT----TCA-AG
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187374 21 -    191337 A----T------C--TCTGAA------A----G-TC--CAT----TCA-AG
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13646746 16 -  18376816 a----t------c--tttgaa------a---aa-aa--ca-----------
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1947896 15 -   3870691 a----t------c--tctgat------TATCAG------------------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 6
s Spilogale_gracilis.SpiGra_flattened_line_13525             26896 21 +     97271 A----T------C--CCTGAA------A----A-TC--CAT----TCG-AG
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 13
s Suricata_suricatta.SurSur_flattened_line_6629               6849 21 -    196729 T----T------C--CCTGAA------A----A-TC--CAT----TCA-CA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 13
s Sus_scrofa.CM000828.4                                   62881881 23 -  69701581 A----T------C--CAGGGA-AA---A----G-tc--cat----aca-ta
i Sus_scrofa.CM000828.4                                  C 0 I 268
s Symphalangus_syndactylus.tarseq_199                      1087543 21 -   1523678 A----T------C--TCTGAA------A----A-CC--CAT----TCA-AG
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6499 17 +     41958 ----------------CTGAA------A----A-TC--CAT----TCC-AG
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69133 13 +    116680 A----T------T--CCTGAA------A----A-TC---------------
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 I 2
s Tapirus_indicus.TapInd_scaffold_9301                      114872 21 -    156842 A----T------T--ACTGAA------A----A-TC--CAT----TCA-AG
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383324 21 +    539355 A----T------C--GCTGAA------A----A-TC--CAT----TCA-AG
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10320 21 +     70052 A----C------C--CCAGAA------A----A-TC--TAT----TTA-AG
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               14625 21 +     25099 A----C------C--CCAGAA------A----A-TC--TAT----TTA-AG
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422571 21 + 186847797 A----T------C--TCTGAA------A----T-TC--CAT----TCA-AG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              102715 16 +    114563 A----T------T--CCTAAG-AAAAAA----A------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 6
s Tolypeutes_matacus.TolMat_scaffold_228639                   1534 20 +      8208 A----T------C--CCTGGA------A----A-TC--CGT----TAA-A-
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78646 17 +    610378 ----------------CTGAA------A----A-TC--CAT----TTA-AG
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          5297 21 -     20410 A----T------C--TCTGAA------A----T-TG--CAT----TCA-AG
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9491 21 +     15221 A----T------C--TCTGAA------A----T-TG--CAT----TCA-AG
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5397 21 +     19930 A----T------C--TCTGAA------A----T-TG--CAT----TCA-AG
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       1825 21 -     19997 A----T------C--TCTGAA------A----T-TG--CAT----TCA-AG
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            41945 21 -     60166 A----T------C--TCTGAA------A----T-TG--CAT----TCA-AG
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9418 21 -     27529 A----T------C--TCTGAA------A----T-TG--CAT----TCA-AG
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9354 21 -     18194 A----T------C--TCTGAA------A----T-TG--CAT----TCA-AG
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3093 21 -     21137 A----T------C--TCTGAA------A----T-TG--CAT----TCA-AG
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    1793 21 -     10723 A----T------C--TCTGAA------A----T-TG--CAT----TCA-AG
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                          949 21 +      9834 A----T------C--TCTGAA------A----T-TG--CAT----TCA-AG
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19263 21 +     32220 A----T------C--TCTGAA------A----T-TG--CAT----TCA-AG
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933361 21 +   6242583 A----T------C--TCTGAA------A----T-TG--CAT----TCA-AG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2607 21 +     20839 A----T------C--TCTGAA------A----T-TG--CAT----TCA-AG
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    161  9 -      1748 -----------------------------------c--cat----tca-AG
i Tragulus_javanicus.TraJav_scaffold_140459              n 236 C 0
s Trichechus_manatus.JH594705.1                            4292056 21 +  10818551 a----t------c--CCTGGA------A----A-TC--CAT----TCA-AG
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2149257 21 +   4065304 A----T------T--GCTAGA------A----A-TC--TAT----TCA-AG
i Tupaia_chinensis.KB320699.1                            C 0 I 13
s Tupaia_tana.TupTan_flattened_line_97126                     2879 21 -     10553 A----T------T--GCTAGA------A----A-TC--CAT----TCA-AG
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737357 21 +  33153633 A----T------T--CCTGAA------A----A-TC--CAT----TCA-AG
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   51197 21 -     77625 A----C------C--TCTAAA------G----A-GT--CAG----TCA-AG
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4846594 21 -   5085361 A----T------C--CCTGAA------A----A-TC--CAT----TCA-AG
i Ursus_maritimus.KK499267.1                             C 0 I 13
s Vicugna_pacos.KN270157.1                                 5368056 21 -   5488506 a----t------C--CCTGAA------A----A-TC--CAT----TCA-AG
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7072 21 -     43706 A----T------C--CCTGGA------A----A-TC--TAT----TCA-AG
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 13
s Xerus_inauris.XerIna_scaffold_48378                        19392 15 -     24430 A----T------C--CCTGAT------AATCAT------------------
i Xerus_inauris.XerIna_scaffold_48378                    C 0 I 6
s Zalophus_californianus.ZalCal_flattened_line_63728          1522 21 +      2932 A----T------T--CTTAAA------A----C-TC--CAT----TCA-AG
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 I 13
s Zapus_hudsonius.ZapHud_scaffold_11398                       9682 11 +     63895 A----T------C--TCCAAG------A----A------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 6
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11049 21 +     12536 A----T------T--CCTGAA------A----A-TC--CAT----TTA-AG
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Saiga_tatarica.SaiTat_scaffold_373180                       3225 222 +      4321 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4576 218 +     55207 I
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Pantholops_hodgsonii.KE114653.1                          1264036 222 -   2937107 I
e Ovis_canadensis.OviCan_scaffold_2572                      173103 222 -    191736 I
e Ovis_aries.CM001607.2                                   17584682 222 +  44047080 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144328 218 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1355292  2 +   3988456 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Moschus_moschiferus.MosMos_scaffold_61429                  27091 222 -     27816 I
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17151 222 +     36099 I
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Elaphurus_davidianus.JRFZ01104969.1                       309953 220 +    607251 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Capra_hircus.CM004588.1                                 18059667 222 -  44709034 I
e Capra_aegagrus.CM003241.1                               18828947 222 +  46296322 I
e Bubalus_bubalis.KI419123.1                               2818124 220 +   4408762 I
e Bos_taurus.CM000203.6                                   18082634 220 +  45695690 I
e Bos_mutus.JH880303.1                                     1124552 224 -   1948126 I
e Bos_indicus.CM003047.1                                  20271996 220 +  48749331 I
e Bison_bison.KN261452.1                                    198791 220 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    25751 222 +     34529 I
e Antilocapra_americana.AntAmePen_scaffold_12469             97280 223 -    100397 I
e Ammotragus_lervia.NIVO01071767.1                          674829 222 -   2318259 I

a score=0.000000
s hg38.chrUn_KI270753v1                                        534 27 +     62944 ATCCTGA-TGTGTA-AG-AACCG------------------CA----ATCAA
s Acinonyx_jubatus.LLWD01001279.1                           816654 13 -   1699592 TTCTTAG-TATTTA--------------------------------------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 11
s Acomys_cahirinus.AcoCah_scaffold_12655                     66415 40 +     87051 ttct-ta-tattta-aa-gcctactcca-tga--tag-aaccc----ctaca
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 14 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506628 11 -  29979442 -------------------ACCA------------------CA----ATCAA
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 13 C 0
s Ailurus_fulgens.LNAC01001112.1                             74919 11 -    347723 -------------------ACCA------------------CA----AGCAA
i Ailurus_fulgens.LNAC01001112.1                         I 13 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64697 23 -     89534 T--TTGA-TACTTT-TG-AGTCA------------------CA----ATC--
i Allactaga_bullata.AllBul_scaffold_9566                 I 6 I 17
s Allenopithecus_nigroviridis.k141_3361533                    9007 27 -     52922 ATCCTGA-TACGTA-AG-AACCA------------------CA----ATCTA
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          8932 27 -     28001 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9058 27 -      9772 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            215 27 -     12518 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      182806 27 +    412891 TTCTTAA-TAATTA-GG-AACCA------------------CA----ATCCA
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       6941 27 +     20879 TTCTTGA-CATTTA-AG-AACTA------------------CA----ATGAA
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 6 C 0
s Arctocebus_calabarensis.k141_288239                        14145 14 +     17124 ctcaaac-catgta-a------------------------------------
i Arctocebus_calabarensis.k141_288239                    C 0 I 9
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2158 27 +     43469 TTCTTAA-TAATTA-GG-AACCA------------------CA----GTGCA
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  48997 27 -     92717 TTCTTGG-TATTTA-AG-AACCA------------------CA----ACAAA
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              49622 27 +     85213 TTCTTGG-TATTTA-AG-AACCA------------------CA----ACAAA
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191234 27 +  23207421 TTCTTAA-TATTTA-GG-AACCA------------------CA----ATCAA
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         1700 27 -     18090 TTCTTAA-TAGTTA-GG-AACCA------------------CA----ATCAA
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998588 27 -  17673402 TTCTTAA-TATTTA-GG-AACCA------------------CA----ATCAA
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331052 27 -   7040546 TTCTTAA-TATTTA-GG-AACCA------------------CA----ATCAA
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399328 27 -   1652518 TTCTTAA-TATTTA-GG-AACCA------------------CA----ATCAA
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795483 11 -  60362399 -------------------ACCA------------------CA----ATCAA
i CanFam4.chr16                                          I 13 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181539 11 -    185531 -------------------ACCA------------------CA----ATCAA
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 13 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9030926 11 -   9314153 -------------------ACCA------------------CA----ATCAA
i Canis_lupus_dingo.QKWQ01000480.1                       I 13 C 0
s Canis_lupus_familiaris.chr16                            17955190 11 -  59632846 -------------------ACCA------------------CA----ATCAA
i Canis_lupus_familiaris.chr16                           I 13 C 0
s Canis_lupus_orion.HG994398.1                            18496494 11 +  63665305 -------------------ACCA------------------CA----ATCAA
i Canis_lupus_orion.HG994398.1                           I 13 C 0
s Capromys_pilorides.CapPil_scaffold_65020                     649 26 -     12242 TATTTGA-TATTTA-AA-AATCA------------------CA----ATCA-
i Capromys_pilorides.CapPil_scaffold_65020               I 6 I 2
s Carlito_syrichta.NW_007259797.1                           140723 25 -    496798 A-CTTGA-TAACTA-AG-A-CCA------------------TA----AGCAA
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2576 27 -     11696 TTCTTAA-TAATTA-GG-AACCA------------------CA----ATCCA
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133342 26 +    179628 TTCTTAA-CAGTGA-AA-AATCA------------------CA----ATT-A
i Castor_canadensis.CasCan_scaffold_2074                 I 10 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     88927 27 +    217609 TTCTTAA-CATTTA-GG-AACCG------------------CA----ATCAA
i Catagonus_wagneri.CatWag_scaffold_2839                 I 261 C 0
s Cavia_aperea.AVPZ01000300.1                             18347182 26 -  23392119 TTCTTGA-TATCTA-AA-AACCA------------------CA----GTCA-
i Cavia_aperea.AVPZ01000300.1                            I 6 I 2
s Cavia_porcellus.DS562891.1                              18359442 26 -  23407841 TTCTTGA-TATCTA-AA-AACCA------------------CA----GTCA-
i Cavia_porcellus.DS562891.1                             I 6 I 2
s Cavia_tschudii.CavTsc_scaffold_8919                        98317 26 +    143979 TTCTTGA-TATCTA-AA-AACCA------------------CA----GTCA-
i Cavia_tschudii.CavTsc_scaffold_8919                    I 6 I 2
s Cephalopachus_bancanus.k141_2037105                         4640 25 -      8605 A-CTTGA-TAACTA-AG-A-CTA------------------TA----AGCAA
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227562 26 +  27778364 TTCTTAA-TATTTA-GG-AA-CA------------------CA----ATCAA
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2280 26 -      3715 TTCTTAA-TATTTA-GG-AA-CA------------------CA----ATCAA
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4469976 27 +   4669795 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8525 27 -     19203 ATCCTGA-TACGTA-AG-AGCCG------------------CA----ATCTA
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           2944 27 +      8260 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3174 27 +     27781 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3320 27 -     20310 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6304 27 +     29689 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             657 27 +      9989 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           8992 27 -     27936 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9011 27 -     11289 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811387 27 +  39242232 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217078 27 -  21565898 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34198 27 -     53127 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1490 27 +      7159 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9003 27 -     27947 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          8979 27 +     17596 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39473 27 -     41420 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCCA
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4498 27 -      6351 TTTTTGC-TATTTA-GG-GACCG------------------TG----GTCCA
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16422 27 -     52598 TTCTTGG-TATTTA-AG-AACCA------------------CA----CTCAA
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           11771 27 +     57038 TTCTTGG-TATTTA-AG-AACCA------------------CA----CTCAA
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1248212 25 +   2543920 tttttga-tattta-aa-aacc-------------------ca----atca-
i Chinchilla_lanigera.JH722012.1                         I 6 I 2
s Chlorocebus_aethiops.ctg25                              18422942 27 -  18827391 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9385 27 -     50209 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416390 27 + 135778131 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 14826 22 +     19366 TTATTG------TA-GG-GACAA------------------TG----GTCCA
i Choloepus_didactylus.ChoDid_scaffold_45914             I 2 C 0
s Choloepus_hoffmanni.KN194906.1                            169921 22 +    839153 TTATTG------TA-GG-GACAA------------------TG----GTCCA
i Choloepus_hoffmanni.KN194906.1                         I 2 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_172426               8928 27 -     10935 TTCTTAA-CATATA-GG-GACCA------------------CA----ATCAA
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          C 0 C 0
s Colobus_angolensis.KN981557.1                            1904910 27 +   2368649 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944528 27 + 200372422 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31422 27 +     84244 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545670 27 -  53390261 TTCTTAA-TATTTA-GG-AATCA------------------CA----ATCAA
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10192 27 -     20389 CTCTTAA-TAATTA-GG-AACCA------------------AA----ATCAA
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 46660 42 +     63868 ttat-ta-cattta-ag-gcctactcga-tgagctag-aaccc----atata
i Cricetomys_gambianus.CriGam_scaffold_18520             I 14 C 0
s Cricetulus_griseus.LT883664.1                           11663646 42 + 224834208 tcat-ta-tgttta-ag-gctgactcaa-tgagatgg-aaccc----ataca
i Cricetulus_griseus.LT883664.1                          I 15 C 0
s Crocidura_indochinensis.CroInd_scaffold_603213               810 27 +      1923 TTCTTAA-TATTTA-GG-AACCA------------------CA----ATTGA
i Crocidura_indochinensis.CroInd_scaffold_603213         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             17686 11 -     87169 -------------------ACCA------------------CAATCAA----
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 13 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35349 26 +     51376 TTTTTGA-TATTTA-AA-AGCCA------------------CA----ATCA-
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 6 I 2
s Cuniculus_paca.CunPac_flattened_line_231100                 2557 26 +      5455 TTCTTGA-TATTTA-AA-AACCT------------------CA----ATCA-
i Cuniculus_paca.CunPac_flattened_line_231100            I 6 I 2
s Dasyprocta_punctata.DasPun_flattened_line_206793             948 26 +      3576 TTCTTGA-TATTGA-AA-AACAA------------------CA----ATCA-
i Dasyprocta_punctata.DasPun_flattened_line_206793       I 6 I 2
s Dasypus_novemcinctus.JH564415.1                            60746 14 +   2246927 TTTTTCC-TATTTT-G------------------------------------
i Dasypus_novemcinctus.JH564415.1                        C 0 I 12
s Daubentonia_madagascariensis.ctg71                      12532592 27 -  12879189 TTCTTGG-TATTTA-AG-AACCA------------------CA----ATTAA
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16810870 27 +  35494412 TACTTAA-TATTTA-GG-AACCA------------------CG----ATCAA
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8627607 27 +  20541912 TTCTTAA-TAATTA-GG-AACCC------------------CA----ATCCA
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669094 27 +   1390856 TTCTTAA-TATTTA-GG-AATCA------------------CA----ATCAA
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2169 27 +    198055 TTCTTAA-TATTTA-GG-AACCA------------------CA----ATCAA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34009 25 +     67921 TTTTTGA-TATTTA-AA-AACC-------------------CA----ATCA-
i Dinomys_branickii.DinBra_scaffold_21862                I 6 I 2
s Dipodomys_ordii.KN672350.1                              18895510 26 +  37912305 TATTTGA-TAGT-A-AG-AATCA------------------TA----ATCGA
i Dipodomys_ordii.KN672350.1                             I 10 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  11719 26 +     14536 TATTTGA-TAGT-A-AG-AACCA------------------TA----ATCGA
i Dipodomys_stephensi.DipSte_scaffold_75855              I 10 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31203 26 -     42551 TTCTTGA-TATTTA-AA-AACTG------------------CA----GTCA-
i Dolichotis_patagonum.DolPat_scaffold_30833             I 6 I 2
s Eidolon_helvum.KE759718.1                                   7120 23 +     11740 TTTTTAA-TAATTA-GG-AAACA------------------CA--------A
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1088685 27 +  10337057 TTCCTCA-AAATTA-AA-GAATA------------------TA----ATGAA
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          12453 41 -    110024 ttat-ta-tat-ta-ag-gcttactcaa-tgagat-gtaaccc----atata
i Ellobius_lutescens.LOEQ01008920.1                      I 15 C 0
s Ellobius_talpinus.LOJH01123422.1                            3403 41 +      5358 ttat-ta-tat-ta-ag-gcttactc-agtgagat-gtaaccc----atata
i Ellobius_talpinus.LOJH01123422.1                       I 15 C 0
s Enhydra_lutris.KZ291758.1                               16325471 13 -  41312741 TTCTTAG-TATTTA--------------------------------------
i Enhydra_lutris.KZ291758.1                              C 0 I 7
s Eptesicus_fuscus.JH977646.1                              2143457 27 -  14770903 TTCTTAA-TAATTG-GG-AAGCA------------------CA----ATCAA
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279436 27 +   4378816 TTCTTAA-TACTTA-GG-AACCA------------------CA----Ttcaa
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527257 27 -  39960074 TTCTTAA-TACTTA-GG-AACCA------------------CA----Ttcaa
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29272 27 +    498745 TTCTTAA-TACTTA-GG-AACCA------------------CA----Ttcaa
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3320473 27 -   7059049 tttttaa-tacata-gg-aacca------------------cc----atcat
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21199621 27 -  21539334 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10546 27 +    133382 TTCTTAA-TATTTA-GG-AACCA------------------CA----ATCAA
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24484 27 -     44125 TTCTTAA-TATTTA-GG-AACCA------------------CA----ATCAA
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.KN305074.1                                       318 13 -      2052 TTCTTAG-TATTTA--------------------------------------
i Felis_catus.KN305074.1                                 C 0 I 11
s Felis_catus_fca126.CM031415.1                           20185084 13 + 205367284 TTCTTAG-TATTTA--------------------------------------
i Felis_catus_fca126.CM031415.1                          C 0 I 11
s Felis_nigripes.FelNig_flattened_line_125938                10198 13 -     11347 TTCTTAG-TATTTA--------------------------------------
i Felis_nigripes.FelNig_flattened_line_125938            C 0 I 11
s Fukomys_damarensis.KN121974.1                             848226 26 +   3816255 ttcttGC-TATTTA-AA-AACCA------------------CA----ATCA-
i Fukomys_damarensis.KN121974.1                          I 6 I 2
s Galagoides_demidoff.k141_31856                              2623 27 -      3432 TTCTTGG-TATTCA-AG-ACCCA------------------TG----TTcct
i Galagoides_demidoff.k141_31856                         C 0 I 293
s Galeopterus_variegatus.GalVar_scaffold_56069               25136 27 +     26054 TTCTTGA-TAGTTA-AG-AACCA------------------CG----ATCAA
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30050 26 +     49224 -TCTTGA-TATTTA-AG-AACCA------------------CA----ATCAA
i Glis_glis.GliGli_scaffold_19807                        I 1 C 0
s Gorilla_beringei.k141_2022027                               1182 27 +      3305 ATCCTGG-TGTGTA-AG-AACCG------------------CA----ATCAG
i Gorilla_beringei.k141_2022027                          I 40 C 0
s Gorilla_gorilla.CYUI03002401.1                              5404 27 +      7071 ATCCTGG-TGTGTA-AG-AACCG------------------CA----ATCAG
i Gorilla_gorilla.CYUI03002401.1                         I 40 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   29777 27 +     78134 TTCTTAA-TATTTA-AG-AACCA------------------CA----ATCAA
i Graphiurus_murinus.GraMur_scaffold_10447               I 6 C 0
s Helogale_parvula.HelPar_flattened_line_2585               230856 11 +    327341 -------------------ACCA------------------CAATCAA----
i Helogale_parvula.HelPar_flattened_line_2585            I 13 C 0
s Heterocephalus_glaber.JH602082.1                        20659110 22 +  22651954 TTCTTGC-TATTTA-AA-AAcca------------------ca---------
i Heterocephalus_glaber.JH602082.1                       I 6 I 2
s Heterohyrax_brucei.HetBruBak_scaffold_173205                3051 27 -      3357 TCCTTAA-CATTTG-GG-GACCA------------------CC----GTCAA
i Heterohyrax_brucei.HetBruBak_scaffold_173205           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111726 27 +    128679 TTCTTAA-TATTTA-GG-AACCA------------------CA----ATCAA
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108067 27 +   1711038 TTCTTAA-TAATTA-GA-AACCA------------------CA----ATCAA
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39506 27 +     43066 TTCTTAA-TAATTA-GA-AACCA------------------CA----ATCAA
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    428959 27 +    630532 ATCCTGA-TATGTA-AG-AACCA------------------CA----ATCAA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  32955 13 +     55795 TTCTTAG-TATTTA--------------------------------------
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 7
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19561 26 -    143317 TTCTTGA-TATTTA-AA-AACCA------------------TA----GTCA-
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 6 I 2
s Hylobates_agilis.k141_307679                               11877 27 -     15490 ATCCTGA-TATGTA-AG-AACCA------------------CA----ATCAA
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              53882 27 +     67168 ATCCTGA-TATGTA-AG-AACCA------------------CA----ATCAA
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189537329 27 - 191637585 ATCCTGA-TATGTA-AG-AACCA------------------CA----ATCAA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3330427 27 -  11177569 ATCCTGA-TATGTA-AG-AACCA------------------CA----ATCAA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80649 27 +    135385 TTCTTGG-TATTTA-AA-AACCA------------------CA----GTCAA
i Hystrix_cristata.HysCri_scaffold_5660                  I 6 I 1
s Ictidomys_tridecemlineatus.JH393364.1                    7514275 27 -   7955117 TCCTTGA-CATTTA-AG-AACTA------------------TC----ATCAA
i Ictidomys_tridecemlineatus.JH393364.1                  I 6 C 0
s Indri_indri.k141_3655594                                   17854 27 +     31101 TTCTTGG-TATTTA-AG-AACCA------------------CA----ATGAA
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22087 27 +     23964 TTCTTAA-TATTTA-GG-AACCA------------------CA----ATCAA
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271059 23 -   9596543 T--TTGA-TACATT-AG-AGTCA------------------CA----ATC--
i Jaculus_jaculus.JH725527.1                             I 6 I 17
s Kogia_breviceps.KogBre_flattened_line_192630                1354 27 -      3359 TTCTTAA-TATTTA-GG-AACCA------------------CA----ATCAA
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    11596 27 -     42476 TTCTTAA-TAATTG-GG-AACCA------------------CA----ATCAA
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6486 27 -     23766 TTCTTGG-TATTTA-AG-AACCA------------------CA----ATCAA
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24433 27 +     45836 TTCTTGG-TATTTA-AG-AACCA------------------CA----ATCAA
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_582783                           307 27 -      1589 TTCTTGG-TATTTA-AG-AACCA------------------CA----ATCAA
i Lepilemur_ruficaudatus.k141_582783                     n 27 I 367
s Lepilemur_septentrionalis.k141_185316                      22491 27 +     54090 TTCTTGG-TATTTA-AG-AACCA------------------CA----ATCAA
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3035818 11 +   3914936 -------------------ACCA------------------CA----ATCAA
i Leptonychotes_weddellii.KB714746.1                     I 13 C 0
s Lepus_americanus.LepAme_scaffold_107385                     3292 27 -     14121 TTCTTGA-TTTTC--AACAGCTA------------------AA----ATCAA
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 1
s Lipotes_vexillifer.KE559953.1                             267168 27 -    662738 TTCTTAA-TATTTA-GG-AACCA------------------CA----ATCAA
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1431143 27 +   1826925 ATCCTGA-TACGTA-AG-AACCA------------------CA----ATCTA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             402 14 +     11245 ctcaaac-tatgta-a------------------------------------
i Loris_lydekkerianus.k141_2539221                       C 0 I 9
s Loris_tardigradus.ctg83                                   999237 14 +   6120653 ctcaaac-tatgta-a------------------------------------
i Loris_tardigradus.ctg83                                C 0 I 9
s Loxodonta_africana.GL010049.1                            4214158 27 -  43346337 TTCTTGA-TGTTTA-GG-CACCA------------------CA----GTCAA
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951430 11 -  59628241 -------------------ACCA------------------CA----ATCAA
i Lycaon_pictus.CM007581.1                               I 13 C 0
s Macaca_arctoides.k141_2326796                               1331 27 +     40492 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670591 27 +  60120075 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7089 27 -     26193 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            74880 27 -    114318 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   602 27 -     23192 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10051 27 -     29190 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18622 27 +     37952 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833710 27 + 187317192 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452268 27 -  25927173 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74471 27 +     89720 ATCCTGA-TAAGTA-AG-AACCG------------------CA----ATCTA
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1468 27 +     20474 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1269 27 -     14993 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  323901 27 -    668171 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15411 27 -     15935 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20207 27 -     45290 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87263 23 +     94391 TTTTTAA-TAATTA-GG-AAACA------------------CA--------A
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23931761 27 -  24302211 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               345941 27 +    752769 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15290 27 +    737560 TTCTTAG-TATTTA-GG-AACCA------------------Ca----atcaa
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              46679 27 -    317179 TTCTTAG-TATTTA-GG-AACCA------------------Ca----atcaa
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097129 27 -  40650429 TCCTTGA-CATTTA-AG-AACTA------------------TA----ATCAA
i Marmota_marmota.CZRN01000018.1                         I 6 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6513 27 -    207569 TTCTTAG-TCATTA-GA-AACTG------------------CA----ATCAA
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              5936 13 +     13704 TTCTTAG-TATTTA--------------------------------------
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 7
s Meriones_unguiculatus.MerUng_scaffold_7390                 27950 42 +    140813 ttat-tg-tattta-aa-gcttaatcaa-tgagatgg-aacct----ttaaa
i Meriones_unguiculatus.MerUng_scaffold_7390             I 14 C 0
s Mesocricetus_auratus.KB708134.1                         12177993 42 -  29670104 tcat-ta-tgctta-ag-tcttactcaa-tgagatgg-aaccc----atata
i Mesocricetus_auratus.KB708134.1                        I 15 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    2755 27 +     10310 TTCTTAA-TATTTA-GG-AACCA------------------CA----ATGAA
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18283011 27 -  93316391 TTCTTGG-TATTTA-AG-AACCG------------------CA----CTCAA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    15153 28 -    145209 TTCTTAACTATTTA-AG-GATCA------------------CA----GTCAA
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13118 27 -     19307 TTCTTAA-TAATTA-GG-AACCA------------------CA----ATCCA
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11256371 41 -  27267610 ttat-ta-tat-ta-ag-gcttactcaa-tgagatgg-aaccc----atata
i Microtus_ochrogaster.CM001695.1                        I 15 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1848548 27 +   8254450 TTCTTAA-TAATTC-GG-AACCA------------------CA----ATCAA
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32417 27 +     64694 TTCTTCA-TAATTC-GG-AACCA------------------CA----ATCAA
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3498 27 -     28506 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62148 11 -     63350 -------------------ACCA------------------CA----ATCAA
i Mirounga_angustirostris.MirAng_flattened_line_22144    I 13 C 0
s Mirza_zaza.k141_952172                                      4372 27 -     37649 TTCTTGA-TATTTA-AG-AACCA------------------CA----CTCAA
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26260 27 -    437263 TTCTTAA-TATTTA-GG-AACCA------------------CG----ATCAA
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137522 27 -    366855 TTCTCAA-TAATTG-GG-AACCA------------------CA----ATCAA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   24047 11 +     37127 -------------------ACCA------------------CAATCAA----
i Mungos_mungo.MunMun_flattened_line_23663               I 13 C 0
s Murina_feae.MurFea_scaffold_85699                           4606 27 +     14753 TTCTTAA-TAATTA-GG-AACCA------------------CA----ATCAA
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2047 26 +     14296 TT-TTGG-TATTTA-AG-AACCA------------------CA----ATCAA
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 6 C 0
s Mustela_putorius.JH418006.1                               297358 13 -  14710649 TTCTTAG-TATTTA--------------------------------------
i Mustela_putorius.JH418006.1                            C 0 I 7
s Myocastor_coypus.MyoCoy_scaffold_10123                     70834 28 -     80779 TATTTGA-TATTTA-AA-AACCA------------------CA--CAATGA-
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 6 I 2
s Myotis_brandtii.KE162005.1                                277714 27 -  10118263 TTCTTAA-TAATTA-GG-AACCA------------------CA----ATCAA
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585285 27 -   6019432 TTCTTAA-TAATTA-GG-AACCA------------------CA----ATCAA
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3901502 27 -   4330536 TTCTTAA-TAATTA-GG-AACCA------------------CA----ATCAA
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32051 27 +     33610 TTCTTAA-TAATTA-GG-AACCA------------------CA----ATCAA
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              185788 23 +    196477 TT----C-TATTTA-GG-GACCC------------------CA----GTCCA
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 2 C 0
s Nannospalax_galili.KL204047.1                            2025208  1 -   3037898 ----------------------A-----------------------------
i Nannospalax_galili.KL204047.1                          I 5 I 6
s Nasalis_larvatus.k141_413338                                9509 27 +     21681 ACCCTGA-TACGTA-AG-AACCA------------------CA----ATCTA
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865216 27 +   7148211 TTCTTAA-TATTTA-GG-AACCA------------------CA----ATCAA
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756081 27 +    783361 GTCTTTA-TAATTA-GG-AGCCG------------------CC----ATCAA
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145682 13 -   9404916 TTCTTAG-TATTTA--------------------------------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 7
s Nycticebus_bengalensis.LG01                            102569664 18 - 196305487 TTTTTGG-CATTCA-AG-AAC-------------------------------
i Nycticebus_bengalensis.LG01                            T 4542 I 4547
s Nycticebus_coucang.k141_2959429                              860 21 +      1168 TTTTTGG-CATTCA-AG-AACCA------------------T----------
i Nycticebus_coucang.k141_2959429                        I 26 n 23
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105733691 18 + 199412804 TTTTTGG-CATTCA-AG-AAC-------------------------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       T 10943 I 10948
s Odobenus_rosmarus.KB229312.1                              500433 11 -   2017862 -------------------ACCa------------------ca----atcaa
i Odobenus_rosmarus.KB229312.1                           I 13 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   16711 39 +     28053 ttat-ta-tat-ta-ag-gctttctcaa-tgagatgg-aaccc----gta--
i Ondatra_zibethicus.OndZib_scaffold_46174               I 15 I 60
s Onychomys_torridus.OnyTor_scaffold_2986                    74814 42 +    102263 ttat-ta-tattca-ag-gcttactc-agtgagggag-aaccc----ataca
i Onychomys_torridus.OnyTor_scaffold_2986                I 15 C 0
s Orcinus_orca.KB316932.1                                  2781131 27 -  10937097 TTCTTAA-TATTTA-GG-AACCA------------------CA----ATCAA
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6514 27 -     18566 TTCTTAA-TATTTA-GG-GACCA------------------CA----GTCAA
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67144146 13 + 174332312 TTCTTGA-TTTTC--A------------------------------------
i Oryctolagus_cuniculus.CM000791.1                       I 10 I 6
s Otocyon_megalotis.JAEUCK010005147.1                       458432 13 -    559221 TTCTTAC-TATTTA--------------------------------------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 11
s Pan_paniscus.KQ411613.1                                    35896 27 +     80009 ATCCTGG-TGTGTA-AG-AACTG------------------CA----ATCAA
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189136846 27 + 189151597 ATCCTGA-TGTGTA-AG-AACCG------------------CA----ATCAA
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  140298 13 +    230217 TTCTTAG-TATTTA--------------------------------------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 11
s Panthera_pardus.KV860321.1                                251827 13 +  18783137 TTCTTAG-TATTTA--------------------------------------
i Panthera_pardus.KV860321.1                             C 0 I 11
s Panthera_tigris.KE722367.1                               4710268 13 -   8748460 TTCTTAG-TATTTA--------------------------------------
i Panthera_tigris.KE722367.1                             C 0 I 11
s Papio_anubis.CM001495.2                                183437083 27 + 183742232 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1145 27 +     20448 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20557767 27 +  20919399 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_4051466                                   1345 27 -      1598 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Papio_kindae.k141_4051466                              C 0 C 0
s Papio_papio.k141_802527                                     3177 27 +     27711 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  3166 27 +      9205 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      1097 13 -     78924 TTCTTAG-TATTTA--------------------------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 7
s Perodicticus_ibeanus.k141_855320                            4378 14 +     13100 ctcaaac-catgta-a------------------------------------
i Perodicticus_ibeanus.k141_855320                       C 0 I 9
s Perodicticus_potto.k141_1092580                             2746 14 +     25941 ctcaaac-catgta-a------------------------------------
i Perodicticus_potto.k141_1092580                        C 0 I 9
s Perognathus_longimembris.PerPac_flattened_line_34437       25063 26 +     32600 TGTTTGA-TAGT-A-AG-AACTA------------------TA----ATTGA
i Perognathus_longimembris.PerPac_flattened_line_34437   I 10 C 0
s Peromyscus_maniculatus.KI615324.1                       18187600 42 -  18517816 ttat-ta-tattta-ag-gcttactcaa-tgagagag-aaccc----ataca
i Peromyscus_maniculatus.KI615324.1                      I 15 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25577 26 -     29689 CCTTTTA-TACTTG-AA-AACCA------------------CA----ATCA-
i Petromus_typicus.PetTyp_scaffold_42190                 I 6 I 2
s Phocoena_phocoena.PhoPho_flattened_line_24159               8178 27 +     63832 TTCTTAA-TATTTA-GG-AACCA------------------CA----ATCAA
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38026 27 +     62158 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        32755 27 +     89929 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34171 27 +     51399 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290390 27 -  14605196 ATCCTGA-TATGTA-AG-AACCG------------------CA----ATCTA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_7723             79072 27 +     79650 TTCTTAA-TAATTG-GG-AACCA------------------CA----ATCAA
i Pipistrellus_pipistrellus.PipPip_scaffold_7723         C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           33890 27 +     35617 TTCTTAA-TATTTA-GG-AACCA------------------CA----ATCAA
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189124931 27 + 189387572 ATCCTGA-TATGTA-AG-AACTG------------------CA----ATCAA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9564774 27 +   9816681 ATCCTGA-TATGTA-AG-AACTG------------------CA----ATCAA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               67667 27 -     81375 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9491 27 +     10147 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9659 22 -     22811 TCCTTAA-CATTTG-GG-GACCA------------------CC---------
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     985727 27 +   2598838 TTCTTGG-TATTTC-AG-AACCA------------------CA----ATGAA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          24015 27 +     38485 TTCTTGG-TATTTC-AG-AACCA------------------CA----ATGAA
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                              177 27 +      4256 TGCTTGG-TATTTA-AG-AACCA------------------CA----ATGAA
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          21535 27 +     35766 TGCTTGG-TATTTA-AG-AACCA------------------CA----ATGAA
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1630595                          16814 27 +     17239 TGCTTGG-TATTTA-AG-AACCA------------------CA----ATGAA
i Propithecus_perrieri.k141_1630595                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        23529 27 -     67325 TGCTTGG-TATTTA-AG-AACCA------------------CA----ATGAA
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_1019028                         13245 27 -     13615 TTCTTGG-TATTTC-TG-AACCA------------------CA----ATGAA
i Propithecus_verreauxi.k141_1019028                     C 0 C 0
s Psammomys_obesus.NESX01036370.1                             5584 42 -     21651 ttat-tg-tattta-aa-gcttaatcaa-tgagatgg-aacct----ataac
i Psammomys_obesus.NESX01036370.1                        I 14 C 0
s Pteronotus_parnellii.KE909381.1                            10901 27 -     21811 TTCTTAA-TAAGTA-CG-AATCA------------------CA----AGCAA
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36379 13 +     42204 TTCTTAG-TATTTA--------------------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 7
s Pteropus_alecto.KB030862.1                              22973393 23 +  28871421 TTTTTAA-TAATTA-GG-AAACA------------------CA--------A
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1329 23 -      8028 TTTTTAA-TAATTA-GG-AAACA------------------CA--------A
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20262803 13 -  38429054 TTCTTAG-TATTTA--------------------------------------
i Puma_concolor.QAVW01001104.1                           C 0 I 11
s Pygathrix_cinerea.k141_1153803                              9495 27 -     91421 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603629 27 +   7812017 ATCCTGA-TACGTA-AG-AACCG------------------CA----ACCTA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9467 27 -     72585 ATCCTGA-TACGTA-AG-AACCG------------------CA----ACCTA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr8                                 113028395 42 - 133307652 ttat-tg-tattta-ag-gcttattacc-tgaaatag-aaccc----atatg
i Rattus_norvegicus.chr8                                 I 14 I 67
s Rhinolophus_sinicus.LVEH01000134.1                        366615 27 -   3329780 TTCTTAA-TAATTA-GA-AACCA------------------CA----ATCAA
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                              881 27 -     11128 GTCCTGA-TGCGTA-AG-AACCG------------------CA----ATCTA
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230259 27 - 195417433 ATCCTGA-TGCGTA-AG-AACCG------------------CA----ATCTA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7665967 27 +   7961872 GTCCTGA-TGCGTA-AG-AACCG------------------CA----ATCTA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84376 23 -     96226 TTTTTAA-TAATTA-GG-AAACA------------------CA--------A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151086 27 -    313613 TTCTTAA-TATTTA-GG-AATCA------------------CA----ATCAA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          14010 27 -     19888 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21216 27 +     39453 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            1740 27 +     27826 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1260 27 -     19483 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1324 27 +      7198 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9582 27 +     15514 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187395 27 -    191337 TTCTTAA-TATTTC-AG-AACCA------------------CA----GTGAA
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13646762 27 -  18376816 ttCTTAA-TATTTA-GG-AATCA------------------TG----ATTTG
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1947917 27 -   3870691 TCCTTGA-CATTTA-AG-AACTA------------------TC----ATCAA
i Spermophilus_dauricus.KZ294078.1                       I 6 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             26930 11 +     97271 -------------------ACCA------------------CA----ATCAA
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 13 C 0
s Suricata_suricatta.SurSur_flattened_line_6629               6883 11 -    196729 -------------------ACCA------------------CAATCAA----
i Suricata_suricatta.SurSur_flattened_line_6629          I 13 C 0
s Sus_scrofa.CM000828.4                                   62882172 27 -  69701581 ttCTTAA-TATTTA-GG-AACCA------------------CA----ATCAA
i Sus_scrofa.CM000828.4                                  I 268 C 0
s Symphalangus_syndactylus.tarseq_199                      1087564 27 -   1523678 ATCCTGA-TATGTA-AG-AACCA------------------CA----ATCAA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6516 27 +     41958 TTCTTAA-TAATTA-GG-AACCA------------------CA----ATCAA
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69148 27 +    116680 TTTTAAC-TATGTA-GG-GACCA------------------CA----GTCCA
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 2 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      114893 27 -    156842 TTCTTAA-TATTTA-GG-AACCA------------------CA----ATCAA
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383345 27 +    539355 TTCTTAA-TATTTA-GG-AACCA------------------CA----ATCAA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10341 25 +     70052 A-CTTGA-TAATTA-AG-A-CCA------------------TA----AGCAA
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               14646 25 +     25099 A-CTTGA-TAATTA-AG-A-CCA------------------TA----AGCAA
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422592 27 + 186847797 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              102737 26 +    114563 CTTTTTA-TATTTG-AA-AACCA------------------CA----ATCA-
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 6 I 2
s Tolypeutes_matacus.TolMat_scaffold_228639                   1554 27 +      8208 TTTTTGC-TATTTA-GG-GACCA------------------TG----GTCCA
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78663 27 +    610378 TTCTTAA-TAATTA-GG-AACCA------------------CA----ATCCA
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          5318 27 -     20410 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9512 27 +     15221 ATCCTGA-TACGTA-AG-AACTG------------------CA----ATCTA
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5418 27 +     19930 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       1846 27 -     19997 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            41966 27 -     60166 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9439 27 -     27529 ATCCTGA-TACGTA-AG-AACCA------------------CA----ATCTA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9375 27 -     18194 ATCCTGA-TATGTA-AG-AACCG------------------CA----ATCTA
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3114 27 -     21137 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    1814 27 -     10723 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                          970 27 +      9834 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19284 27 +     32220 ATCCTGA-TACGTA-AG-AACTG------------------CA----ATCTA
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933382 27 +   6242583 ATCCTGA-TATGTA-AG-AACCG------------------CA----ATCTA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2628 27 +     20839 ATCCTGA-TACGTA-AG-AACCG------------------CA----ATCTA
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    170 27 -      1748 TTCTTAA-TACTTG-GG-AAACA------------------CA----ATCAA
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 C 0
s Trichechus_manatus.JH594705.1                            4292077 27 +  10818551 TTCTTAA-TGCTTA-GG-GACCA------------------CA----GCCAA
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2149291 13 +   4065304 ----------------G-AATCA------------------CC----ATCAA
i Tupaia_chinensis.KB320699.1                            I 13 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     2900 27 -     10553 TTCTTGG-TATTTA-AG-AACCA------------------CC----ATCAA
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737378 27 +  33153633 TTCTTAA-TATTTA-GG-AACCA------------------CA----ATCAA
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   51218 27 -     77625 TTCTTAA-TTTTAA-GA-AATCA------------------CA----GTCAA
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4846628 11 -   5085361 -------------------ACCA------------------CA----ATCAA
i Ursus_maritimus.KK499267.1                             I 13 C 0
s Vicugna_pacos.KN270157.1                                 5368077 27 -   5488506 TTCTTAA-TATTTA-AG-AACCA------------------CA----ATCAA
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7106 11 -     43706 -------------------ACCA------------------CA----ATCAA
i Vulpes_lagopus.VulLag_flattened_line_30954             I 13 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19413 26 -     24430 TCTTTGA-CATGC--AG-AACTA------------------CA----ATTAA
i Xerus_inauris.XerIna_scaffold_48378                    I 6 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1556 11 +      2932 -------------------ACCA------------------CA----ATCAA
i Zalophus_californianus.ZalCal_flattened_line_63728     I 13 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9699 24 +     63895 T--TTGA-TCCTTCATA-AGCCC------------------CA----ATC--
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 6 I 15
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11070 27 +     12536 TTCTTAA-TATTTA-GG-AATCA------------------CA----ATCAA
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Saiga_tatarica.SaiTat_scaffold_373180                       3225 222 +      4321 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4576 218 +     55207 I
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Pantholops_hodgsonii.KE114653.1                          1264036 222 -   2937107 I
e Ovis_canadensis.OviCan_scaffold_2572                      173103 222 -    191736 I
e Ovis_aries.CM001607.2                                   17584682 222 +  44047080 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144328 218 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1355292  2 +   3988456 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Moschus_moschiferus.MosMos_scaffold_61429                  27091 222 -     27816 I
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17151 222 +     36099 I
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Elaphurus_davidianus.JRFZ01104969.1                       309953 220 +    607251 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Capra_hircus.CM004588.1                                 18059667 222 -  44709034 I
e Capra_aegagrus.CM003241.1                               18828947 222 +  46296322 I
e Bubalus_bubalis.KI419123.1                               2818124 220 +   4408762 I
e Bos_taurus.CM000203.6                                   18082634 220 +  45695690 I
e Bos_mutus.JH880303.1                                     1124552 224 -   1948126 I
e Bos_indicus.CM003047.1                                  20271996 220 +  48749331 I
e Bison_bison.KN261452.1                                    198791 220 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    25751 222 +     34529 I
e Antilocapra_americana.AntAmePen_scaffold_12469             97280 223 -    100397 I
e Ammotragus_lervia.NIVO01071767.1                          674829 222 -   2318259 I

a score=0.000000
s hg38.chrUn_KI270753v1                                        561 19 +     62944 G-CA---------------------AGGAAGCACA--GGTA---AG
s Acinonyx_jubatus.LLWD01001279.1                           816678 19 -   1699592 A-CA---------------------AGATAATACA--GATA---AG
i Acinonyx_jubatus.LLWD01001279.1                        I 11 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     66455  3 +     87051 t-ga------------------------------------------
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 60
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506639 19 -  29979442 A-CA---------------------AGATAATACA--GATA---AG
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             74930 19 -    347723 A-CA---------------------AGATAATACA--GATA---AG
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64737  4 -     89534 ---------------------------------------TA---CG
i Allactaga_bullata.AllBul_scaffold_9566                 I 17 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9034 19 -     52922 G-CA---------------------AGGAAGCACA--GGTA---AG
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          8959 19 -     28001 G-CA---------------------AGGAAGCACA--GGTA---AG
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9085 19 -      9772 G-CA---------------------AGGAAGCACA--GGTA---AG
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            242 19 -     12518 G-CA---------------------AGGAAGCACA--GGTA---AG
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      182833 17 +    412891 A-CA---------------------AGA--GCACC--GGTA---AG
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       6968 19 +     20879 A-CA----------AGCAAGCACA-A------------GTA---AC
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14168 38 +     17124 a-tgtaccttcatattaacc--cacaacaaataaa--aata---aa
i Arctocebus_calabarensis.k141_288239                    I 9 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2185 17 +     43469 A-CG---------------------AGA--GCACA--GGTA---AG
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  49024 19 -     92717 A-GG---------------------AGGAAGCAAA--GGTA---AG
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              49649 19 +     85213 A-GG---------------------AGGAAGCAAA--GGTA---AG
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191261 16 +  23207421 A-CA---------------------A---AGCACA--GGTA---AG
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 7
s Balaenoptera_bonaerensis.DF707048.1                         1727 16 -     18090 A-CA---------------------A---AGCACA--GGTA---AG
i Balaenoptera_bonaerensis.DF707048.1                    C 0 I 7
s Camelus_bactrianus.KN276810.1                            9998615 16 -  17673402 G-CA---------------------A---AGCACA--GGTA---AG
i Camelus_bactrianus.KN276810.1                          C 0 I 7
s Camelus_dromedarius.KN272107.1                           2331079 16 -   7040546 G-CA---------------------A---AGCACA--GGTA---AG
i Camelus_dromedarius.KN272107.1                         C 0 I 7
s Camelus_ferus.KB017975.1                                  399355 16 -   1652518 G-CA---------------------A---AGCACA--GGTA---AG
i Camelus_ferus.KB017975.1                               C 0 I 7
s CanFam4.chr16                                           17795494 18 -  60362399 A-CA---------------------GGA-AATGCA--GATA---AG
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181550 19 -    185531 A-CA---------------------GGAGAATGCA--GATA---AG
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9030937 19 -   9314153 A-CA---------------------GGAAAATGCA--GATA---AG
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955201 19 -  59632846 A-CA---------------------GGAGAATGCA--GATA---AG
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496505 19 +  63665305 A-CA---------------------GGAGAATGCA--GATA---AG
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                     677  4 -     12242 ---------------------------------------GA---GA
i Capromys_pilorides.CapPil_scaffold_65020               I 2 I 3
s Carlito_syrichta.NW_007259797.1                           140748 19 -    496798 A-CA---------------------AGGGTGCTTG--GGTA---AG
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2603 17 -     11696 A-CA---------------------GGA--GCACA--GGTA---AG
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133368 19 +    179628 G-TA----------ACAAAACATA-G------------GTA---AG
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     88954 16 +    217609 A-TA---------------------A---AGCATA--GGTA---AG
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 7
s Cavia_aperea.AVPZ01000300.1                             18347210  3 -  23392119 ----------------------------------------A---GG
i Cavia_aperea.AVPZ01000300.1                            I 2 C 0
s Cavia_porcellus.DS562891.1                              18359470  3 -  23407841 ----------------------------------------A---GG
i Cavia_porcellus.DS562891.1                             I 2 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98345  3 +    143979 ----------------------------------------A---GG
i Cavia_tschudii.CavTsc_scaffold_8919                    I 2 C 0
s Cephalopachus_bancanus.k141_2037105                         4665 19 -      8605 A-CA---------------------AGGGTGCTTG--GGTA---AG
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227588 19 +  27778364 A-CA---------------------AGAAAACACA--GGTA---AG
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2306 19 -      3715 A-CA---------------------AGAAAACACA--GGTA---AG
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470003 19 +   4669795 G-CA---------------------AGGAAGCACA--GGTA---AG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8552 19 -     19203 G-CA---------------------AGGAAGCACA--GGTA---AG
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           2971 19 +      8260 G-CA---------------------AGGAAGCACA--GGTA---AG
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3201 19 +     27781 G-CA---------------------AGGAAGCACA--GGTA---AG
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3347 19 -     20310 G-CA---------------------AGGAAGCACA--AGTA---AA
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6331 19 +     29689 G-CA---------------------AGGAAGCACA--AGTA---AA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             684 19 +      9989 G-CA---------------------AGGAAGCACA--GGTA---AG
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9019 19 -     27936 G-CA---------------------AGGAAGCACA--GGTA---AG
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9038 19 -     11289 G-CA---------------------AGGAAGCACA--GGTA---AG
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811414 19 +  39242232 G-CA---------------------AGGAAGCACA--AGTA---AA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217105 19 -  21565898 G-CA---------------------AGGAAGCACA--GGTA---AG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34225 19 -     53127 G-CA---------------------AGGAAGCACA--GGTA---AG
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1517 19 +      7159 G-CA---------------------AGGAAGCACA--AGTA---AA
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9030 19 -     27947 G-CA---------------------AGGAAGCACA--GGTA---AG
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9006 19 +     17596 G-CA---------------------AGGAAGCACA--GGTA---AG
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39500 19 -     41420 G-CA---------------------AGGAAGCACA--GGTA---AG
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4525 18 -      6351 A-CA---------------------AGGAGGCACA---ATA---AG
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1248239  4 +   2543920 ---------------------------------------GA---GG
i Chinchilla_lanigera.JH722012.1                         I 2 C 0
s Cheirogaleus_major.k141_333249                             16449 13 -     52598 A-CA---------------------AGTAAGCAAA-----------
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           11798 13 +     57038 A-CA---------------------AGGAAGCAAA-----------
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chlorocebus_aethiops.ctg25                              18422969 19 -  18827391 G-CA---------------------AGGAAGCACA--GGTA---AG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9412 19 -     50209 G-CA---------------------AGGAAGCACA--GGTA---AG
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416417 19 + 135778131 G-CA---------------------AGGAAGCACA--GGTA---AG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 14848 18 +     19366 G-CA---------------------AGGAGGCACA---ATA---AG
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            169943 18 +    839153 G-CA---------------------AGGAGGCACA---ATA---AG
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_172426               8955 19 -     10935 G-CA---------------------AGTAGGTATA--AACA---AA
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          C 0 C 0
s Colobus_angolensis.KN981557.1                            1904937 19 +   2368649 G-CA---------------------AGGAAGCCCA--GGTA---AG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944555 19 + 200372422 G-CA---------------------AGGAAGCACA--GGTA---AG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31449 19 +     84244 G-CA---------------------AGGAAGCACA--GGTA---AG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545697 19 -  53390261 A-TA---------------------AGAAAGCACA--AGTA---AG
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10219 19 -     20389 A-CA---------------------AGAAAGCACA--GGGA---GG
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 46702  3 +     63868 a-ga------------------------------------------
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 59
s Cricetulus_griseus.LT883664.1                           11663688  3 + 224834208 t-gg------------------------------------------
i Cricetulus_griseus.LT883664.1                          C 0 I 60
s Crocidura_indochinensis.CroInd_scaffold_603213               837 19 +      1923 G-CA---------------------AGAATTTACA--AGCA---AA
i Crocidura_indochinensis.CroInd_scaffold_603213         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             17697 18 -     87169 A-CA---------------------AGTTAATTA---GATA---AG
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35377  4 +     51376 ---------------------------------------AA---GA
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 2 I 5
s Cuniculus_paca.CunPac_flattened_line_231100                 2585  4 +      5455 ---------------------------------------GA---GG
i Cuniculus_paca.CunPac_flattened_line_231100            I 2 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793             976  4 +      3576 ---------------------------------------CA---GG
i Dasyprocta_punctata.DasPun_flattened_line_206793       I 2 C 0
s Dasypus_novemcinctus.JH564415.1                            60772 18 +   2246927 A-CA---------------------AGGAGGCACA---ATA---AG
i Dasypus_novemcinctus.JH564415.1                        I 12 C 0
s Daubentonia_madagascariensis.ctg71                      12532619 19 -  12879189 A-CA---------------------AGGAAGCAAA--GGTA---AG
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16810897 16 +  35494412 A-CA---------------------A---AGCACA--GGTA---AG
i Delphinapterus_leucas.KZ290073.1                       C 0 I 7
s Desmodus_rotundus.KZ672289.1                             8627634 17 +  20541912 A-CA---------------------AGA--GTACA--GGTA---AG
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669121 19 +   1390856 A-CA---------------------AGAAAACACA--GGTA---AG
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2196 19 +    198055 A-CA---------------------AGAAAACACA--GGTA---AG
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34036  4 +     67921 ---------------------------------------GA---GG
i Dinomys_branickii.DinBra_scaffold_21862                I 2 C 0
s Dipodomys_ordii.KN672350.1                              18895536 19 +  37912305 A-CA----------ATAAAGCACA-G------------ATA---AG
i Dipodomys_ordii.KN672350.1                             C 0 I 5
s Dipodomys_stephensi.DipSte_scaffold_75855                  11745 19 +     14536 A-CA----------ATAAAGCACA-G------------ATA---AG
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 I 5
s Dolichotis_patagonum.DolPat_scaffold_30833                 31231  3 -     42551 ----------------------------------------A---GG
i Dolichotis_patagonum.DolPat_scaffold_30833             I 2 C 0
s Eidolon_helvum.KE759718.1                                   7143 19 +     11740 A-CA---------------------GGAAAGCACA--GGTA---AG
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1088712 19 +  10337057 A-CA---------------------AAGAGATCTA--GATG---AG
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          12494  3 -    110024 t-ga------------------------------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 60
s Ellobius_talpinus.LOJH01123422.1                            3444  3 +      5358 t-ga------------------------------------------
i Ellobius_talpinus.LOJH01123422.1                       C 0 I 60
s Enhydra_lutris.KZ291758.1                               16325491 19 -  41312741 A-CA---------------------AGATAATACA--GATA---AG
i Enhydra_lutris.KZ291758.1                              I 7 C 0
s Eptesicus_fuscus.JH977646.1                              2143484 19 -  14770903 A-CA---------------------AGAACACACA--GGCG---AG
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279463 19 +   4378816 a-ca---------------------agaaaacaca--ggca---aG
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527284 19 -  39960074 a-ca---------------------agaaaacaca--ggca---aG
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29299 19 +    498745 a-ca---------------------agaaaacaca--ggca---aG
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3320500 22 -   7059049 a-aa---------------------agaaaacaca--agtagaaaa
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21199648 19 -  21539334 G-CA---------------------AGGAAGCACA--GGTA---AG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10573 16 +    133382 A-CA---------------------A---AGCGCA--GGTA---AG
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 7
s Eubalaena_japonica.EubJap_flattened_line_31514             24511 16 -     44125 A-CA---------------------A---AGCACA--GGTA---AG
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 I 7
s Felis_catus.KN305074.1                                       342 19 -      2052 A-CA---------------------AGATAATACA--GATA---AG
i Felis_catus.KN305074.1                                 I 11 C 0
s Felis_catus_fca126.CM031415.1                           20185108 19 + 205367284 A-CA---------------------AGATAATACA--GATA---AG
i Felis_catus_fca126.CM031415.1                          I 11 C 0
s Felis_nigripes.FelNig_flattened_line_125938                10222 19 -     11347 A-CA---------------------AGATAATACA--GATA---AG
i Felis_nigripes.FelNig_flattened_line_125938            I 11 C 0
s Fukomys_damarensis.KN121974.1                             848254  4 +   3816255 ---------------------------------------GT---GG
i Fukomys_damarensis.KN121974.1                          I 2 C 0
s Galagoides_demidoff.k141_31856                              2943 19 -      3432 a-ca---------------------aggcactaaa--ggtg---ga
i Galagoides_demidoff.k141_31856                         I 293 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25163 19 +     26054 A-CA---------------------AGGAAGCACA--GGTA---AG
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30076 19 +     49224 A-CA----------AAGAAGCACA-G------------GTA---AG
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_2022027                               1209 19 +      3305 G-CA---------------------AGGAAGCACA--GGTA---AG
i Gorilla_beringei.k141_2022027                          C 0 C 0
s Gorilla_gorilla.CYUI03002401.1                              5431 19 +      7071 G-CA---------------------AGGAAGCACA--GGTA---AG
i Gorilla_gorilla.CYUI03002401.1                         C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   29804 19 +     78134 A-CA----------AAGAAGCACA-G------------ATA---AG
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               230867 19 +    327341 A-CA---------------------AGATAATACC--GATA---AG
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20659134  4 +  22651954 ---------------------------------------ga---gg
i Heterocephalus_glaber.JH602082.1                       I 2 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_173205                3078 19 -      3357 A-CA---------------------CAGTGGCACA--GATA---AG
i Heterohyrax_brucei.HetBruBak_scaffold_173205           C 0 I 17
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111753 16 +    128679 A-CA---------------------A---AGCACA--GGTA---AG
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 I 7
s Hipposideros_armiger.JXIK01000431.1                       108094 19 +   1711038 A-CA---------------------AGAAAGTGCA--GGTA---GG
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39533 19 +     43066 A-TA---------------------AGAAAGCACA--GGTA---GG
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    428986 19 +    630532 G-CA---------------------AGGAAGCACA--GGTA---AG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  32975 19 +     55795 A-CA---------------------AGATAATAAC--AGTA---AG
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 7 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19589  3 -    143317 ----------------------------------------A---GG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 2 C 0
s Hylobates_agilis.k141_307679                               11904 19 -     15490 G-CA---------------------AGGAAGCACA--GGTA---AG
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              53909 19 +     67168 G-CA---------------------AGGAAGCACA--GGTA---AG
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189537356 19 - 191637585 G-CA---------------------AGGAAGCACA--GGTA---AG
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3330454 19 -  11177569 G-CA---------------------AGGAAGCACA--GGTA---AG
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80677  4 +    135385 ---------------------------------------GA---GG
i Hystrix_cristata.HysCri_scaffold_5660                  I 1 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514302 19 -   7955117 A-CA----------AGTAAGCACA-G------------GTA---AG
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   17881 19 +     31101 A-GG---------------------AGGAAGCAAA--GGTA---AG
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22114 16 +     23964 A-CA---------------------A---AGCACA--GGTA---AG
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 I 7
s Jaculus_jaculus.JH725527.1                               8271099  4 -   9596543 ---------------------------------------TA---AG
i Jaculus_jaculus.JH725527.1                             I 17 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1381 16 -      3359 A-CA---------------------A---AGCACA--GGTA---AG
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 I 7
s Lasiurus_borealis.LasBor_scaffold_32767                    11623 19 -     42476 A-CC---------------------AGAATGCACA--GGCA---AG
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6513 19 -     23766 A-GG---------------------AAAAAGCAAA--GGTA---AG
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24460 19 +     45836 A-GG---------------------AAAAAGCAAA--GGTA---AG
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31370 19 -     32627 A-GG---------------------AAAAAGCAAA--GGTA---AG
i Lepilemur_ruficaudatus.k141_420445                     I 27 C 0
s Lepilemur_septentrionalis.k141_185316                      22518 19 +     54090 A-GG---------------------AAAAAGCAAA--GGTA---AG
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3035829 18 +   3914936 A-CG---------------------AGATAATACA--GATA---A-
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     3320 11 -     14121 --------------------------GA----AGA--GGTA---CG
i Lepus_americanus.LepAme_scaffold_107385                I 1 I 15
s Lipotes_vexillifer.KE559953.1                             267195 16 -    662738 A-CA---------------------A---AGCACA--GGTA---AG
i Lipotes_vexillifer.KE559953.1                          C 0 I 7
s Lophocebus_aterrimus.ctg367                              1431170 19 +   1826925 G-CA---------------------AGGAAGCACA--GGTA---AG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             425 39 +     11245 a-tgtaccatcatattaacctgca-aaaaaataaa--aata---aa
i Loris_lydekkerianus.k141_2539221                       I 9 I 2
s Loris_tardigradus.ctg83                                   999260 39 +   6120653 a-tgtaccatcatattaacctgca-aaaaaataaa--aata---aa
i Loris_tardigradus.ctg83                                I 9 I 2
s Loxodonta_africana.GL010049.1                            4214185 19 -  43346337 A-CA---------------------AGGAggcaca--gatg---ag
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951441 19 -  59628241 A-CA---------------------GGAGAATGCA--GATA---AG
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               1358 19 +     40492 G-CA---------------------AGGAAGCACA--GGTA---AG
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670618 19 +  60120075 G-CA---------------------AGGAAGCACA--GGTA---AG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7116 19 -     26193 G-CA---------------------AGGAAGCACA--GGTA---AG
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            74907 19 -    114318 G-CA---------------------AGGAAGCACA--GGTA---AG
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   629 19 -     23192 G-CA---------------------AGGAAGCACA--GGTA---AG
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10078 19 -     29190 G-CA---------------------AGGAAGCACA--GGTA---AG
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18649 19 +     37952 G-CA---------------------AGGAAGCACA--GGTA---AG
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833737 19 + 187317192 G-CA---------------------AGGAAGCACA--GGTA---AG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452295 19 -  25927173 G-CA---------------------AGGAAGCACA--GGTA---AG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74498 19 +     89720 G-CA---------------------AGGAAGCACA--GGTA---AG
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1495 19 +     20474 G-CA---------------------AGGAAGCACA--GGTA---AG
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1296 19 -     14993 G-CA---------------------AGGAAGCACA--GGTA---AG
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  323928 19 -    668171 G-CA---------------------AGGAAGCACA--GGTA---AG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15438 19 -     15935 G-CA---------------------AGGAAGCACA--GGTA---AG
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20234 19 -     45290 G-CA---------------------AGGAAGCACA--GGTA---AG
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87286 19 +     94391 A-CA---------------------GGAAAGCACA--AGTC---AG
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23931788 19 -  24302211 G-CA---------------------AGGAAGCACA--GGTA---AG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               345968 19 +    752769 G-CA---------------------AGGAAGCACA--GGTA---AG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15317 19 +    737560 a-ca---------------------aagaaataca--agtg---ag
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              46706 19 -    317179 a-ca---------------------aagaaataca--agtg---ag
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097156 19 -  40650429 A-CA----------AGTAAGCACA-G------------GTA---AG
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6540 19 -    207569 A-CA---------------------GGAAAGCACA--GATA---GG
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              5956 19 +     13704 C-CA---------------------AGATAATACA--GATA---AG
i Mellivora_capensis.MelCap_flattened_line_69365         I 7 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 27992  3 +    140813 t-ga------------------------------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 59
s Mesocricetus_auratus.KB708134.1                         12178035  3 -  29670104 t-ag------------------------------------------
i Mesocricetus_auratus.KB708134.1                        C 0 I 107
s Mesoplodon_bidens.MesBid_scaffold_108144                    2782 16 +     10310 A-CA---------------------A---AGCACA--GGTA---AG
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 I 7
s Microcebus_murinus.CM007674.1                           18283038 20 -  93316391 AACA---------------------AGGAAGCAAA--GGTA---AG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    15181 19 -    145209 A-CA---------------------AGGAGGCATG--TATG---AA
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13145 17 -     19307 A-CA---------------------AGA--GCACA--GGTA---AG
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11256412  3 -  27267610 c-aa------------------------------------------
i Microtus_ochrogaster.CM001695.1                        C 0 I 59
s Miniopterus_natalensis.LDJU01000034.1                    1848575 19 +   8254450 A-AA---------------------AGAAAGTACA--GATA---AG
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32444 19 +     64694 A-AA---------------------AGAAAGTACA--GATA---AG
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3525 19 -     28506 G-CA---------------------AGGAAGCACA--GGTA---AG
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62159 18 -     63350 A-TG---------------------AGATAATACA--GATA---A-
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      4399 20 -     37649 AACA---------------------AGGAAGCAAA--GGTA---AG
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26287 16 -    437263 A-CA---------------------A---AGCACA--GGTA---AG
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 7
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137549 17 -    366855 A-CG---------------------AGA--GTACA--GGAA---AG
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   24058 19 +     37127 A-CA---------------------AGATAATACC--AATA---AG
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           4633 19 +     14753 G-CA---------------------AGAATGCACA--GGCA---AG
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2073 19 +     14296 A-CA----------AAGAAGCACA-G------------GCA---AG
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               297378 19 -  14710649 A-CA---------------------AGATAATACA--GATA---AG
i Mustela_putorius.JH418006.1                            I 7 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     70864  4 -     80779 ---------------------------------------GA---GA
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 2 I 3
s Myotis_brandtii.KE162005.1                                277741 19 -  10118263 A-CA---------------------AGAATGCACA--GGCA---AG
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585312 19 -   6019432 A-CA---------------------AGAATGCACA--GGCA---AG
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3901529 19 -   4330536 A-CA---------------------AGAATGCACA--GGCA---AG
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32078 19 +     33610 A-CA---------------------AGAATGCACA--GGCA---AG
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              185811 18 +    196477 A-CA---------------------AGGAGACACA---ATA---AG
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025215  6 -   3037898 -------------------------A------------ACA---AG
i Nannospalax_galili.KL204047.1                          I 6 I 35
s Nasalis_larvatus.k141_413338                                9536 19 +     21681 G-CC---------------------AGGAAGCACA--GATA---AG
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865243 16 +   7148211 A-CA---------------------A---AGCACA--GGTA---AG
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 7
s Noctilio_leporinus.NocLep_scaffold_251                    756108 17 +    783361 A-CA---------------------AGA--ACACA--GGTA---AG
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145702 19 -   9404916 A-CA---------------------AGAGAATGCA--GATA---AG
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 7 C 0
s Nycticebus_bengalensis.LG01                            102574229 38 - 196305487 a-tgtgccatcatattaacctgc--aaaaaataaa--aata---aa
i Nycticebus_bengalensis.LG01                            I 4547 I 2
s Nycticebus_coucang.k141_5327727                             1915 38 +      8486 a-tgtgccatcatattaacctgc--aaaaaataaa--aata---aa
i Nycticebus_coucang.k141_5327727                        I 23 I 2
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744657 38 + 199412804 a-tgtGccatcatattaacccgc--aaaaaataaa--aata---aa
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 10948 I 2
s Odobenus_rosmarus.KB229312.1                              500444 19 -   2017862 a-tg---------------------agataataca--gaTA---AG
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    74856  3 +    102263 t-ga------------------------------------------
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 53
s Orcinus_orca.KB316932.1                                  2781158 16 -  10937097 A-CA---------------------A---AGCACA--GGTA---AG
i Orcinus_orca.KB316932.1                                C 0 I 7
s Orycteropus_afer.OryAfe_flattened_line_144387               6541 19 -     18566 A-CA---------------------AGGCAACATA--AATG---AA
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67144165  8 + 174332312 ---------------------------------GA--GGTA---CA
i Oryctolagus_cuniculus.CM000791.1                       I 6 I 15
s Otocyon_megalotis.JAEUCK010005147.1                       458456 19 -    559221 A-CA---------------------AGAGAATGCA--GATA---AG
i Otocyon_megalotis.JAEUCK010005147.1                    I 11 C 0
s Pan_paniscus.KQ411613.1                                    35923 19 +     80009 G-CA---------------------AGGAAGCACA--GGTA---AG
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189136873 19 + 189151597 G-CA---------------------AGGAAGCACA--GGTA---AG
i Pan_troglodytes.CM009242.2                             C 0 N 0
s Panthera_onca.PanOnc_flattened_line_3271                  140322 18 +    230217 A-CA---------------------AGATAATACA--GATA---A-
i Panthera_onca.PanOnc_flattened_line_3271               I 11 C 0
s Panthera_pardus.KV860321.1                                251851 18 +  18783137 A-CA---------------------AGATAATACA--GATA---A-
i Panthera_pardus.KV860321.1                             I 11 C 0
s Panthera_tigris.KE722367.1                               4710292 19 -   8748460 A-CA---------------------AGATAATACA--GATA---AG
i Panthera_tigris.KE722367.1                             I 11 C 0
s Papio_anubis.CM001495.2                                183437110 19 + 183742232 G-CA---------------------AGGAAGCACA--GGTA---AG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1172 19 +     20448 G-CA---------------------AGGAAGCACA--GGTA---AG
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20557794 19 +  20919399 G-CA---------------------AGGAAGCACA--GGTA---AG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_4051466                                   1372 19 -      1598 G-CA---------------------AGGAAGCACA--GGTA---AG
i Papio_kindae.k141_4051466                              C 0 C 0
s Papio_papio.k141_802527                                     3204 19 +     27711 G-CA---------------------AGGAAGCACA--GGTA---AG
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  3193 19 +      9205 G-CA---------------------AGGAAGCACA--GGTA---AG
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      1117 19 -     78924 A-CA---------------------AGATAATACA--GATA---AG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 7 I 36
s Perodicticus_ibeanus.k141_855320                            4401 38 +     13100 a-tgtaccttcatattaacc--cacaacaaataaa--aata---aa
i Perodicticus_ibeanus.k141_855320                       I 9 C 0
s Perodicticus_potto.k141_1092580                             2769 38 +     25941 a-tgtaccttcatattaacc--cacaacaaataaa--aata---aa
i Perodicticus_potto.k141_1092580                        I 9 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25089 19 +     32600 A-CA----------ATAAAGCACA-G------------ATA---AG
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25605  4 -     29689 ---------------------------------------AA---GG
i Petromus_typicus.PetTyp_scaffold_42190                 I 2 C 0
s Peromyscus_maniculatus.KI615324.1                       18187642  3 -  18517816 t-ga------------------------------------------
i Peromyscus_maniculatus.KI615324.1                      C 0 I 53
s Phocoena_phocoena.PhoPho_flattened_line_24159               8205 16 +     63832 A-CA---------------------A---AGCACA--GGTA---AG
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 7
s Piliocolobus_badius.k141_1234363                           38053 21 +     62158 G-CA---------------------AGGAAGCACACAGGTA---AG
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        32782 19 +     89929 G-CA---------------------AGGAAGCACA--GGTA---AG
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34198 19 +     51399 G-CA---------------------AGGAAGCACA--GGTA---AG
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290417 19 -  14605196 G-CA---------------------AGGAAGCACA--GGTA---AG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_7723             79099 19 +     79650 A-CA---------------------AGAATGCACA--GGCA---AA
i Pipistrellus_pipistrellus.PipPip_scaffold_7723         C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           33917 16 +     35617 A-CA---------------------A---AGCACA--GGTA---AG
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 I 7
s Pongo_abelii.CM009266.2                                189124958 19 + 189387572 G-CA---------------------AGGAAGCACA--GATA---AG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9564801 19 +   9816681 G-CA---------------------AGGAAGCACA--GATA---AG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               67694 19 -     81375 G-CC---------------------AGGAAGCACA--GGTA---AG
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9518 19 +     10147 G-CC---------------------AGGAAGCACA--GGTA---AG
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9681 19 -     22811 A-CA---------------------CAGTGGCACA--GATA---AG
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 I 17
s Propithecus_coquerelli.NW_012148875.1                     985754 19 +   2598838 A-GG---------------------AGGAAGCAAA--GGTA---AG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          24042 19 +     38485 A-GG---------------------AGGAAGCAAA--GGTA---AG
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                              204 19 +      4256 A-GG---------------------AGGAAGCAAA--GGTA---AG
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          21562 19 +     35766 A-GG---------------------AGGAAGCAAA--GGTA---AG
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1630595                          16841 19 +     17239 A-GG---------------------AGGAAGCAAA--GGTA---AG
i Propithecus_perrieri.k141_1630595                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        23556 19 -     67325 A-GG---------------------AGGAAGCAAA--GGTA---AG
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_1019028                         13272 19 -     13615 A-GG---------------------AGGAAGCAAA--GGTA---AG
i Propithecus_verreauxi.k141_1019028                     C 0 C 0
s Psammomys_obesus.NESX01036370.1                             5626  3 -     21651 t-ga------------------------------------------
i Psammomys_obesus.NESX01036370.1                        C 0 I 60
s Pteronotus_parnellii.KE909381.1                            10928 17 -     21811 A-CA---------------------AGA--GTACA--GGTA---AG
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36399 19 +     42204 A-CA---------------------AGATAATACA--GATA---AG
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 7 C 0
s Pteropus_alecto.KB030862.1                              22973416 19 +  28871421 A-CA---------------------GGAAAGCACA--GGTA---AG
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1352 19 -      8028 A-CA---------------------GGAAAGCACA--GGTA---AG
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20262827 19 -  38429054 A-CA---------------------AGATAATACA--GATA---AG
i Puma_concolor.QAVW01001104.1                           I 11 C 0
s Pygathrix_cinerea.k141_1153803                              9522 19 -     91421 G-CC---------------------AGGAAGCACA--GGTA---AG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603656 19 +   7812017 G-CC---------------------AGGAAGCACA--GGTA---AG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9494 19 -     72585 G-CC---------------------AGGAAGCACA--GGTA---AG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr8                                  20366424  3 + 133307652 t-ga------------------------------------------
i Rattus_norvegicus.chr8                                 I 73 I 90
s Rhinolophus_sinicus.LVEH01000134.1                        366642 19 -   3329780 A-CA---------------------AGAAAACCCA--GGTA---GG
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                              908 19 -     11128 G-CC---------------------AGGAAGCACA--GGTA---AG
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230286 19 - 195417433 G-CC---------------------AGGAAGCACA--GGTA---AG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7665994 19 +   7961872 G-CC---------------------AGGAAGCACA--GGTA---AG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84399 19 -     96226 A-CA---------------------GGAAAACACA--GGTA---AC
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151113 19 -    313613 A-CA---------------------AGAAAGCACG--GGTA---AG
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 3
s Semnopithecus_entellus.k141_11662                          14037 19 -     19888 G-CC---------------------AGGAAGCACA--GGTA---AG
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21243 19 +     39453 G-CC---------------------AGGAAGCACA--GGTA---AG
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            1767 19 +     27826 G-CC---------------------AGGAAGCACA--GGTA---AG
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1287 19 -     19483 G-CC---------------------AGGAAGCACA--GGTA---AG
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1351 19 +      7198 G-CC---------------------AGGAAGCACA--GGTA---AG
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9609 19 +     15514 G-CC---------------------AGGAAGCACA--GGTA---AG
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187422 19 -    191337 A-CA---------------------AGAATGAACA--GGTA---AG
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13646789 19 -  18376816 A-CA---------------------AGTAAGCACA--AGCA---AA
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1947944 19 -   3870691 A-CA----------AGTAAGCACA-G------------GTA---AG
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             26941 19 +     97271 A-CA---------------------AGATAATACA--GATA---AG
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629               6894 19 -    196729 A-CA---------------------AGATAATACC--GATA---AG
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   62882199 16 -  69701581 A-TA---------------------A---AGCATA--GGTA---AG
i Sus_scrofa.CM000828.4                                  C 0 I 7
s Symphalangus_syndactylus.tarseq_199                      1087591 19 -   1523678 G-CA---------------------AGGAAGCACA--GGTA---AG
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6543 19 +     41958 A-CA---------------------AGAAAGCCCA--GGTA---AG
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69175 18 +    116680 A-CA---------------------AGGAGACACA---ATA---AG
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      114920 19 -    156842 A-CA---------------------AGAAAACACT--GGTA---AG
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383372 19 +    539355 A-CA---------------------AGAAAACACA--GGTA---AG
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10366 19 +     70052 A-CA---------------------AGGGTGCTTG--GGTA---AA
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               14671 19 +     25099 A-CA---------------------AGGGTGCTTG--GGTA---AA
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422619 19 + 186847797 G-CA---------------------AGGAAGCACA--GGTA---AG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              102765  4 +    114563 ---------------------------------------AA---GG
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 2 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   1581 18 +      8208 A-CA---------------------AGGAGGCACA---GTA---AG
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78690 17 +    610378 A-CA---------------------AGA--GCACA--GGTA---AG
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          5345 19 -     20410 G-CC---------------------AGGAAGCACA--GGTA---AG
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9539 19 +     15221 G-CC---------------------AGGAAGCACA--GGTA---AG
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5445 19 +     19930 G-CC---------------------AGGAAGCACA--GGTA---AG
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       1873 19 -     19997 G-CC---------------------AGGAAGCACA--GGTA---AG
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            41993 19 -     60166 G-CC---------------------AGGAAGCACA--GGTA---AG
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9466 19 -     27529 G-CC---------------------AGGAAGCACA--GGTA---AG
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9402 19 -     18194 G-CC---------------------AGGAAGCACA--GGTA---AG
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3141 19 -     21137 G-CC---------------------AGGAAGCACA--GGTA---AG
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    1841 19 -     10723 G-CC---------------------AGGAAGCACA--GGTA---AG
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                          997 19 +      9834 G-CC---------------------AGGAAGCACA--GGTA---AG
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19311 19 +     32220 G-CC---------------------AGGAAGCACA--GGTA---AG
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933409 19 +   6242583 G-CC---------------------AGGAAGCACA--GGTA---AG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2655 19 +     20839 G-CC---------------------AGGAAGCACA--GGTA---AG
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    197 16 -      1748 A-CA---------------------A---AGCACA--GGTA---AG
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 I 7
s Trichechus_manatus.JH594705.1                            4292104 18 +  10818551 A-CT----------------------AGAGGCGTA--GATG---AG
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2149304 18 +   4065304 A-CA---------------------AGGAAGCACA--GG-A---AG
i Tupaia_chinensis.KB320699.1                            C 0 I 9
s Tupaia_tana.TupTan_flattened_line_97126                     2927 18 -     10553 A-CA---------------------AGGAAGCACA--GG-A---AG
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 9
s Tursiops_truncatus.MRVK01000835.1                       15737405 16 +  33153633 A-CA---------------------A---AGCACA--GGTA---AG
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 7
s Uropsilus_gracilis.UroGra_scaffold_12083                   51245 19 -     77625 A-AA---------------------TGAAAGCACA--GGTA---AA
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4846639 19 -   5085361 A-CA---------------------AGATAATACA--GATA---AG
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368104 16 -   5488506 G-CA---------------------A---AGCACA--GGTA---AG
i Vicugna_pacos.KN270157.1                               C 0 I 7
s Vulpes_lagopus.VulLag_flattened_line_30954                  7117 19 -     43706 A-CA---------------------AGAGAATGCA--GATA---AG
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19439 19 -     24430 A-CA----------AGTAAGCACA-G------------GTA---AG
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1567 19 +      2932 A-TG---------------------AGATAATACA--GATA---AG
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9738  4 +     63895 ---------------------------------------TA---TG
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 15 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11097 16 +     12536 A-CA---------------------A---AGCACA--GGTA---AG
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 I 7
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Saiga_tatarica.SaiTat_scaffold_373180                       3225 222 +      4321 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4576 218 +     55207 I
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Pantholops_hodgsonii.KE114653.1                          1264036 222 -   2937107 I
e Ovis_canadensis.OviCan_scaffold_2572                      173103 222 -    191736 I
e Ovis_aries.CM001607.2                                   17584682 222 +  44047080 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144328 218 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1355292  2 +   3988456 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Moschus_moschiferus.MosMos_scaffold_61429                  27091 222 -     27816 I
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17151 222 +     36099 I
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Elaphurus_davidianus.JRFZ01104969.1                       309953 220 +    607251 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Capra_hircus.CM004588.1                                 18059667 222 -  44709034 I
e Capra_aegagrus.CM003241.1                               18828947 222 +  46296322 I
e Bubalus_bubalis.KI419123.1                               2818124 220 +   4408762 I
e Bos_taurus.CM000203.6                                   18082634 220 +  45695690 I
e Bos_mutus.JH880303.1                                     1124552 224 -   1948126 I
e Bos_indicus.CM003047.1                                  20271996 220 +  48749331 I
e Bison_bison.KN261452.1                                    198791 220 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    25751 222 +     34529 I
e Antilocapra_americana.AntAmePen_scaffold_12469             97280 223 -    100397 I
e Ammotragus_lervia.NIVO01071767.1                          674829 222 -   2318259 I

a score=0.000000
s hg38.chrUn_KI270753v1                                         580 35 +     62944 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------A--A
s Acinonyx_jubatus.LLWD01001279.1                            816697 36 -   1699592 CA-AGTA----AA--------------ATCATCTAA-------------A---TTA---A-G----T-ct----ct-t-a---------------a-----------gtt-----------t--a
i Acinonyx_jubatus.LLWD01001279.1                         C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                     9506658 35 -  29979442 CA-AGTA----A---------------ATCACCTAA-------------A---TGA---A-G----T-ct----ct-t-a---------------a-----------gtt-----------t--a
i Ailuropoda_melanoleuca.LNAT01000098.1                   C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                              74949 35 -    347723 CA-AGTA----A---------------ATCATCTAA-------------A---TGA---AA-----T-ct----ct-t-a---------------a-----------gtt-----------t--a
i Ailurus_fulgens.LNAC01001112.1                          C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                      64741 35 -     89534 AA--ACA----A---------------GTCACGTAA-------------A---AG----AAGG-----CT----TTCA-G---------------A-----------TTT-----------G--T
i Allactaga_bullata.AllBul_scaffold_9566                  C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                     9053 35 -     52922 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--A
i Allenopithecus_nigroviridis.k141_3361533                C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                           8978 35 -     28001 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--T
i Allochrocebus_lhoesti.k141_4309873                      C 0 C 0
s Allochrocebus_preussi.k141_310680                            9104 35 -      9772 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--T
i Allochrocebus_preussi.k141_310680                       C 0 C 0
s Allochrocebus_solatus.k141_166128                             261 35 -     12518 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--T
i Allochrocebus_solatus.k141_166128                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                       182850 36 +    412891 CA-AATA----A---------------ATCATCTAA-------------A---CAA---A-GG-----CT----CT-T-A-A-------------A-----------GTT-----------C--A
i Anoura_caudifer.AnoCau_scaffold_1412                    C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                        6987 35 +     20879 CA-AACA----A---------------GACATTTAA----------AAGA---CA----A--------CT----TT-C-A---------------C-----------ATT-----------T--T
i Aplodontia_rufa.AprRuf_scaffold_68852                   C 0 C 0
s Arctocebus_calabarensis.k141_288239                         14206 26 +     17124 ta-ataa----a---------------tcc-------------------a---aga------------ct----tt-t-c---------------a-----------ata-----------t--a
i Arctocebus_calabarensis.k141_288239                     C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                   2202 36 +     43469 CA-AATA----A---------------ATCATCTAA-------------A---CAA---A-GG-----CT----CT-T-A-A-------------A-----------GTT-----------T--A
i Artibeus_jamaicensis.ArtJam_scaffold_25439              C 0 C 0
s Avahi_laniger.k141_765380                                   49043 32 -     92717 AG-AAAA----T---------------ATCATCTAA-------------A---AGA------------TT----TT-T-A---------------A-----------ATG-----------T--A
i Avahi_laniger.k141_765380                               C 0 C 0
s Avahi_peyrierasi.k141_1424874                               49668 32 +     85213 AG-AAAA----T---------------ATCATCTAA-------------A---AGA------------TT----TT-T-A---------------A-----------ATG-----------T--A
i Avahi_peyrierasi.k141_1424874                           C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    15191284 28 +  23207421 ---------------------------ATCATCTAA-------------A---TGA---A-GG-----CT----CT-T-g---------------a-----------gtt-----------t--a
i Balaenoptera_acutorostrata.KI537508.1                   I 7 C 0
s Balaenoptera_bonaerensis.DF707048.1                          1750 28 -     18090 ---------------------------ATCATCTAA-------------A---TGA---A-GG-----CT----CT-T-g---------------a-----------gtt-----------t--a
i Balaenoptera_bonaerensis.DF707048.1                     I 7 C 0
s Camelus_bactrianus.KN276810.1                             9998638 30 -  17673402 ---------------------------ATCATCTAA-------------A---TGA---A-G----g-ct----ct-t-g---------------a-----------att-----------ttta
i Camelus_bactrianus.KN276810.1                           I 7 C 0
s Camelus_dromedarius.KN272107.1                            2331102 30 -   7040546 ---------------------------ATCATCTAA-------------A---TGA---A-G----g-ct----ct-t-g---------------a-----------att-----------ttta
i Camelus_dromedarius.KN272107.1                          I 7 C 0
s Camelus_ferus.KB017975.1                                   399378 30 -   1652518 ---------------------------ATCATCTAA-------------A---TGA---A-G----g-ct----ct-t-g---------------a-----------att-----------ttta
i Camelus_ferus.KB017975.1                                I 7 C 0
s CanFam4.chr16                                            17795512 35 -  60362399 CA-AGTA----A---------------ATCATCTAA-------------A---TGA---TA---A---CT----CT-T-A---------------A-----------GTT-----------T--A
i CanFam4.chr16                                           C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                     181569 35 -    185531 CA-AGTA----A---------------ATCATCTAA-------------A---TGA---TA---A---CT----CT-T-A---------------A-----------GTT-----------T--A
i Canis_lupus_VD.CanFam_VD_scaffold_7008                  C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          9030956 35 -   9314153 CA-AGTA----A---------------ATCATCTAA-------------A---TGA---TA---A---ct----ct-t-a---------------a-----------gtt-----------t--a
i Canis_lupus_dingo.QKWQ01000480.1                        C 0 C 0
s Canis_lupus_familiaris.chr16                             17955220 35 -  59632846 CA-AGTA----A---------------ATCATCTAA-------------A---TGA---TA---A---ct----ct-t-a---------------a-----------gtt-----------t--a
i Canis_lupus_familiaris.chr16                            C 0 C 0
s Canis_lupus_orion.HG994398.1                             18496524 35 +  63665305 CA-AGTA----A---------------ATCATCTAA-------------A---TGA---TA---A---ct----ct-t-a---------------a-----------gtt-----------t--a
i Canis_lupus_orion.HG994398.1                            C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                      684 25 -     12242 ---------------------------GTTATCTAA-------------A---AG------G------TT----TT-T-A---------------A-----------ATT-----------T--T
i Capromys_pilorides.CapPil_scaffold_65020                I 3 C 0
s Carlito_syrichta.NW_007259797.1                            140767 20 -    496798 CA-AATA----A---------------GTCActtaa-------------a---aga---------------------------------------------------------------------
i Carlito_syrichta.NW_007259797.1                         C 0 I 7
s Carollia_perspicillata.CarPer_scaffold_92756                 2620 36 -     11696 CA-AATA----A---------------ATCATCTAA-------------A---CAA---A-GG-----CT----CT-T-G-A-------------A-----------GTT-----------T--A
i Carollia_perspicillata.CarPer_scaffold_92756            C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                     133387 35 +    179628 CT-AGAA----A---------------GTCACCTAA-------------AAGAAG------G------CT----TT-T-A---------------A-----------ACT-----------T--T
i Castor_canadensis.CasCan_scaffold_2074                  C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                      88977 21 +    217609 ---------------------------ATCATCTAA-------------A---TAA---A-G--A---AT----CT-T-----------------------------------------------
i Catagonus_wagneri.CatWag_scaffold_2839                  I 7 C 0
s Cavia_aperea.AVPZ01000300.1                              18347213 32 -  23392119 GA-AATA----A---------------GTCATCTAA-------------A---Ag-----------g-tt----tt-c-a---------------a-----------att-----------a--t
i Cavia_aperea.AVPZ01000300.1                             C 0 C 0
s Cavia_porcellus.DS562891.1                               18359473 32 -  23407841 GA-AATA----A---------------GTCATCTAA-------------A---ag-----------g-tt----tt-c-a---------------a-----------att-----------a--t
i Cavia_porcellus.DS562891.1                              C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                         98348 32 +    143979 GA-AATA----A---------------GTCATCTAA-------------A---AG------G------TT----TT-C-A---------------A-----------ATT-----------A--T
i Cavia_tschudii.CavTsc_scaffold_8919                     C 0 C 0
s Cephalopachus_bancanus.k141_2037105                          4684 20 -      8605 CA-AATA----A---------------GTCACTTAA-------------A---AGA---------------------------------------------------------------------
i Cephalopachus_bancanus.k141_2037105                     C 0 I 7
s Ceratotherium_simum.JH767749.1                           12227607 35 +  27778364 CA-AATA----G---------------ATCATCTAA-------------A---TGA---A-G----t-ct----cc-t-a---------------a-----------att-----------t--a
i Ceratotherium_simum.JH767749.1                          C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804           2325 35 -      3715 CA-AATA----G---------------ATCATCTAA-------------A---TGA---A-G----T-CT----CC-T-A---------------A-----------ATT-----------T--A
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804      C 0 C 0
s Cercocebus_atys.KQ010504.1                                4470022 35 +   4669795 CA-AACA----A---------------AACATCTAA-------------A---AGAagg---------ct----tt-t-a---------------c-----------att-----------t--a
i Cercocebus_atys.KQ010504.1                              C 0 C 0
s Cercocebus_chrysogaster.k141_393940                          8571 35 -     19203 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--A
i Cercocebus_chrysogaster.k141_393940                     C 0 C 0
s Cercocebus_lunulatus.k141_3846941                            2990 35 +      8260 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--A
i Cercocebus_lunulatus.k141_3846941                       C 0 C 0
s Cercocebus_torquatus.k141_3057011                            3220 35 +     27781 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--A
i Cercocebus_torquatus.k141_3057011                       C 0 C 0
s Cercopithecus_ascanius.k141_1024104                          3366 35 -     20310 CA-AACA----A---------------AACATCTAA-------------A---AGAAGC---------CT----TT-T-A---------------C-----------ATT-----------T--T
i Cercopithecus_ascanius.k141_1024104                     C 0 C 0
s Cercopithecus_cephus.k141_1078548                            6350 35 +     29689 CA-AACA----A---------------AACATCTAA-------------A---AGAAGC---------CT----TT-T-A---------------C-----------ATT-----------T--T
i Cercopithecus_cephus.k141_1078548                       C 0 C 0
s Cercopithecus_diana.k141_2427854                              703 35 +      9989 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--T
i Cercopithecus_diana.k141_2427854                        C 0 C 0
s Cercopithecus_hamlyni.k141_187466                            9038 35 -     27936 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--T
i Cercopithecus_hamlyni.k141_187466                       C 0 C 0
s Cercopithecus_lowei.k141_457449                              9057 35 -     11289 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--T
i Cercopithecus_lowei.k141_457449                         C 0 C 0
s Cercopithecus_albogularis.ctg5                                 38811433 35 +  39242232 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--T
i Cercopithecus_albogularis.ctg5                                C 0 C 0
s Cercopithecus_mona.ctg39                                 21217124 35 -  21565898 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--T
i Cercopithecus_mona.ctg39                                C 0 C 0
s Cercopithecus_neglectus.k141_2526306                        34244 35 -     53127 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--T
i Cercopithecus_neglectus.k141_2526306                    C 0 C 0
s Cercopithecus_nictitans.k141_3278028                         1536 35 +      7159 CA-AACA----A---------------AACATCTAA-------------A---AGAAGC---------CT----TT-T-A---------------C-----------ATT-----------T--T
i Cercopithecus_nictitans.k141_3278028                    C 0 C 0
s Cercopithecus_petaurista.k141_807961                         9049 35 -     27947 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--T
i Cercopithecus_petaurista.k141_807961                    C 0 C 0
s Cercopithecus_pogonias.k141_822820                           9025 35 +     17596 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--T
i Cercopithecus_pogonias.k141_822820                      C 0 C 0
s Cercopithecus_roloway.k141_3180641                          39519 35 -     41420 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--T
i Cercopithecus_roloway.k141_3180641                      C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060             4543 34 -      6351 CA-AACA----A---------------TTCATCTAA-------------A---TGA---A-GG-----CT----CT-T-A-A-------------A-----------TTT---------------
i Chaetophractus_vellerosus.ChaVel_scaffold_229060        C 0 C 0
s Cheirogaleus_major.k141_333249                              16462 28 -     52598 -----AA----C---------------ATCATCTAA-------------A---AGA------------TT----TT-T-A---------------A-----------ATG-----------T--A
i Cheirogaleus_major.k141_333249                          C 0 C 0
s Cheirogaleus_medius.k141_1055463                            11811 28 +     57038 -----AA----C---------------ATCATCTAA-------------A---AGA------------TT----TT-T-A---------------A-----------ATG-----------T--A
i Cheirogaleus_medius.k141_1055463                        C 0 C 0
s Chinchilla_lanigera.JH722012.1                            1248243 32 +   2543920 GA-AATA----A---------------GTCatctga-------------a---aa-----------g-tt----tt-t-a---------------a-----------att-----------a--t
i Chinchilla_lanigera.JH722012.1                          C 0 C 0
s Chlorocebus_aethiops.ctg25                               18422988 35 -  18827391 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--T
i Chlorocebus_aethiops.ctg25                              C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                         9431 35 -     50209 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--A
i Chlorocebus_pygerythrus.k141_1025673                    C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                          135416436 35 + 135778131 CA-AACA----A---------------AACATCTAA-------------A---AGAagg---------ct----tt-t-a---------------c-----------att-----------t--t
i Chlorocebus_sabaeus.CM001947.1                          C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                  14866 35 +     19366 CT-AATG----A---------------TTCATCAAT-------------A---GGC---AA---A---TA----AT-T-C---------------A-----------TCT-----------A--A
i Choloepus_didactylus.ChoDid_scaffold_45914              C 0 C 0
s Choloepus_hoffmanni.KN194906.1                             169961 35 +    839153 CT-AATG----A---------------TTCATCAAT-------------A---GGC---AA---A---TA----AT-T-C---------------A-----------TCT-----------a--a
i Choloepus_hoffmanni.KN194906.1                          C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_172426                8974 33 -     10935 TA-AGTA----A---------------TGCATCTAA-------------A-----A---A-G--A---CT----TT-T-A---------------A-----------ATT-----------A--A
i Chrysochloris_asiatica.ChrAsi_scaffold_172426           C 0 I 3
s Colobus_angolensis.KN981557.1                             1904956 35 +   2368649 CA-AACA----G---------------AACATCTAA-------------A---AGAagg---------ct----tt-t-a---------------c-----------att-----------t--t
i Colobus_angolensis.KN981557.1                           C 0 C 0
s Colobus_guereza.LG01                                    199944574 35 + 200372422 CA-AACA----G---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--T
i Colobus_guereza.LG01                                    C 0 C 0
s Colobus_polykomos.k141_906115                               31468 35 +     84244 CA-AACA----G---------------AACATCTAA-------------A---AGAAGG---------AT----TT-T-A---------------C-----------ATT-----------T--T
i Colobus_polykomos.k141_906115                           C 0 C 0
s Condylura_cristata.JH655891.1                            17545716 35 -  53390261 ------CAAATAA--------------ATCGTCAAA-------------A---TAA---A-GG-----TT----ct-t-a---------------a-----------ggt-----------g--a
i Condylura_cristata.JH655891.1                           C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438           10238 35 -     20389 CA-AATA----A---------------ATCATCTAA-------------A---TGA---A-GG-----CT----CT-T-A---------------A-----------GTT-----------T--A
i Craseonycteris_thonglongyai.CraTho_scaffold_58438       C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_603213                856 30 +      1923 ------T----A---------------ACCATCTAA-------------A---TAA---A-G--A---GT----CT-T-G---------------G-----------GTT-----------T--A
i Crocidura_indochinensis.CroInd_scaffold_603213          C 0 I 116
s Cryptoprocta_ferox.CryFer_flattened_line_16129              17715 36 -     87169 CA-AGTA----AA--------------ATCATCCAA-------------A---TAA---A-G----T-CT----CT-T-A---------------A-----------GTT-----------T--A
i Cryptoprocta_ferox.CryFer_flattened_line_16129          C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                   35386 25 +     51376 ---------------------------GTTATCTAA-------------A---AG------G------TT----CT-T-A---------------A-----------ATT-----------A--T
i Ctenomys_sociabilis.CteSoc_scaffold_29687               I 5 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                  2589 32 +      5455 GA-AATA----A---------------GTCATCTAA-------------A---AG----A--------TT----TT-C-A---------------A-----------ATT-----------A--T
i Cuniculus_paca.CunPac_flattened_line_231100             C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793              980 32 +      3576 GA-AATA----A---------------GTCATCTAA-------------A---AC------G------TT----TT-C-A---------------A-----------ATT-----------A--T
i Dasyprocta_punctata.DasPun_flattened_line_206793        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                             60790 33 +   2246927 CA-AAAA----A---------------TTCATCTAA-------------A---CTA---A-G----g-ct----ct-t-a---------------a-----------ttt---------------
i Dasypus_novemcinctus.JH564415.1                         C 0 C 0
s Daubentonia_madagascariensis.ctg71                       12532638 32 -  12879189 CA-AAAA----A---------------GTCATCTAA-------------A---AGA------------TT----TT-T-A---------------A-----------ATG-----------T--A
i Daubentonia_madagascariensis.ctg71                      C 0 C 0
s Delphinapterus_leucas.KZ290073.1                         16810920 28 +  35494412 ---------------------------ATCATCTAA-------------A---TGA---A-GG-----CT----CT-T-g---------------a-----------gtt-----------t--a
i Delphinapterus_leucas.KZ290073.1                        I 7 C 0
s Desmodus_rotundus.KZ672289.1                              8627651 36 +  20541912 CA-AATA----A---------------ATCATCTAA-------------A---CAA---AAG------ct----ct-t-a--------------aa-----------gtt-----------t--a
i Desmodus_rotundus.KZ672289.1                            C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                   669140 35 +   1390856 CA-AATA----A---------------ATCATCTAA-------------A---CTA---A-G----t-ct----cc-t-a---------------a-----------att-----------t--a
i Dicerorhinus_sumatrensis.PEKH010002091.1                C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                     2215 35 +    198055 CA-AATA----G---------------ATCACCTAA-------------A---TGA---A-G----T-CT----CC-T-A---------------A-----------ATT-----------T--A
i Diceros_bicornis.DicBicMic_scaffold_5955                C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                     34040 30 +     67921 GA-AATA----A---------------GTCATCTGA-------------A---AG----A--------TT----TG-T-A---------------A-----------GTT---------------
i Dinomys_branickii.DinBra_scaffold_21862                 C 0 I 1
s Dipodomys_ordii.KN672350.1                               18895560 14 +  37912305 -----------------------------tatct-t-------------a---aa-----------a-aa----ac-------------------------------------------------
i Dipodomys_ordii.KN672350.1                              I 5 I 7
s Dipodomys_stephensi.DipSte_scaffold_75855                   11769 15 +     14536 -----------------------------TATCTTT-------------A---AA----A--------AA----AC-------------------------------------------------
i Dipodomys_stephensi.DipSte_scaffold_75855               I 5 I 7
s Dolichotis_patagonum.DolPat_scaffold_30833                  31234 32 -     42551 GC-AATA----A---------------GTCATCTAA-------------A---AG------G------TT----TT-C-A---------------A-----------ATT-----------A--T
i Dolichotis_patagonum.DolPat_scaffold_30833              C 0 C 0
s Eidolon_helvum.KE759718.1                                    7162 35 +     11740 CA-AATA----A---------------GTAATCTAA-------------A---TGA---A-G----g-ct----ct-t-a---------------c-----------att-----------t--a
i Eidolon_helvum.KE759718.1                               C 0 C 0
s Elephantulus_edwardii.JH947257.1                          1088731 40 +  10337057 CAGAATA----A---------------TACATTCAA-------------A---TGa---------agactttgttt-t-a---------------a-----------aaa-----------a--a
i Elephantulus_edwardii.JH947257.1                        C 0 I 3
s Enhydra_lutris.KZ291758.1                                16325510 35 -  41312741 CA-AGTA----A---------------ATCATCTAA-------------A---TGA---A-G----t-ct----ct-t-a---------------a-----------gtt-----------t--a
i Enhydra_lutris.KZ291758.1                               C 0 C 0
s Eptesicus_fuscus.JH977646.1                               2143503 35 -  14770903 CA-AATA----A---------------ATCATCTCA-------------A---TAA---A-GG-----CT----CT-T-A---------------A-----------GTT-----------T--A
i Eptesicus_fuscus.JH977646.1                             C 0 C 0
s Equus_asinus.JREZ01000139.1                               1279482 35 +   4378816 CA-AATA----A---------------AACCTCTAA-------------A---TGA---A-GG-----CT----CT-T-A---------------A-----------gtt-----------t--a
i Equus_asinus.JREZ01000139.1                             C 0 C 0
s Equus_caballus.CM000403.2                                18527303 35 -  39960074 CA-TATA----A---------------AACCTCTAA-------------A---TGC---A-G----C-CT----CT-T-A---------------A-----------gtt-----------t--a
i Equus_caballus.CM000403.2                               C 0 C 0
s Equus_przewalskii.KK951119.1                                29318 35 +    498745 CA-TATA----A---------------AACCTCTAA-------------A---TGC---A-G----C-CT----CT-T-A---------------A-----------gtt-----------t--a
i Equus_przewalskii.KK951119.1                            C 0 C 0
s Erinaceus_europaeus.JH835339.1                            3320522 26 -   7059049 ------t----aA--------------AGTATCTAA-------------G---TAA---------agact----ct-t-t---------------a-----------------------------
i Erinaceus_europaeus.JH835339.1                          C 0 I 4609
s Erythrocebus_patas.Contig38                              21199667 35 -  21539334 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--T
i Erythrocebus_patas.Contig38                             C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968            10596 28 +    133382 ---------------------------ATCATCTAA-------------A---TGA---A-GG-----CT----CT-T-G---------------A-----------GTT-----------T--A
i Eschrichtius_robustus.EscRob_flattened_line_8968        I 7 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514              24534 28 -     44125 ---------------------------ATCATCTAA-------------A---TGA---A-GG-----CT----CT-T-G---------------A-----------GTT-----------T--A
i Eubalaena_japonica.EubJap_flattened_line_31514          I 7 C 0
s Felis_catus.KN305074.1                                        361 36 -      2052 CA-AGTA----AA--------------ATCATCTAA-------------A---TTA---A-G----T-ct----ct-t-a---------------a-----------gtt-----------t--a
i Felis_catus.KN305074.1                                  C 0 C 0
s Felis_catus_fca126.CM031415.1                            20185127 36 + 205367284 CA-AGTA----AA--------------ATCATCTAA-------------A---TTA---A-G----T-ct----ct-t-a---------------a-----------gtt-----------t--a
i Felis_catus_fca126.CM031415.1                           C 0 C 0
s Felis_nigripes.FelNig_flattened_line_125938                 10241 36 -     11347 CA-AGTA----AA--------------ATCATCTAA-------------A---TTA---A-G----T-CT----CT-T-A---------------A-----------GTT-----------T--A
i Felis_nigripes.FelNig_flattened_line_125938             C 0 C 0
s Fukomys_damarensis.KN121974.1                              848258 32 +   3816255 GA-AATA----A---------------ATCatctaa-------------a---aa-----------g-tt----tt-t-a---------------a-----------att-----------a--t
i Fukomys_damarensis.KN121974.1                           C 0 C 0
s Galagoides_demidoff.k141_31856                               2962 23 -      3432 tc-tcaa----c---------------tccaacaaa-------------a---acg------------tt----c--------------------------------------------------
i Galagoides_demidoff.k141_31856                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069                25182 37 +     26054 CA-AATA----A---------------GTCATCTAA-------------A---AGA---AAG------TT----TT-T-A---------------A-----------ATT-----------AGAA
i Galeopterus_variegatus.GalVar_scaffold_56069            C 0 C 0
s Glis_glis.GliGli_scaffold_19807                             30095 35 +     49224 CA-AATA----A---------------GTCATCTAA----------AAGA---AG----A--------CT----TT-A-G---------------A-----------AAT-----------T--T
i Glis_glis.GliGli_scaffold_19807                         C 0 C 0
s Gorilla_beringei.k141_2022027                                1228 35 +      3305 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-T---------------C-----------ATT-----------A--A
i Gorilla_beringei.k141_2022027                           C 0 C 0
s Gorilla_gorilla.CYUI03002401.1                               5450 36 +      7071 CA-AACA----A---------------AACATCTAA-------------A---AGAAgg---------ct----tt-t-t---------------c-----------att-a---------a--a
i Gorilla_gorilla.CYUI03002401.1                          C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    29823 35 +     78134 CA-AATA----A---------------CTCATCTAA----------AAGA---AG------G------CT----TT-T-G---------------A-----------ATT-----------T--T
i Graphiurus_murinus.GraMur_scaffold_10447                C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                230886 36 +    327341 CA-AGTT----AA--------------GTCATCCAA-------------A---TAA---AA-----T-CT----CT-T-A---------------A-----------GTT-----------T--A
i Helogale_parvula.HelPar_flattened_line_2585             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         20659138 32 +  22651954 aa-aata----a---------------atcatctaa-------------a---aa-----------g-tt----tt-t-a---------------a-----------att-----------a--t
i Heterocephalus_glaber.JH602082.1                        C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_173205                 3114 28 -      3357 -----------------------------------------------------TGA---A-G--A---CT----CT-T-CTACTGAACAAGAAAAA-----------------------------
i Heterohyrax_brucei.HetBruBak_scaffold_173205            I 17 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076                111776 28 +    128679 ---------------------------ATCATCTAA-------------A---TGA---A-GG-----CT----CT-T-A---------------A-----------GTT-----------T--A
i Hippopotamus_amphibius.HipAmp_scaffold_9076             I 7 C 0
s Hipposideros_armiger.JXIK01000431.1                        108113 35 +   1711038 CA-AATA----A---------------ATCATCTAA-------------A---TGA---A-GG-----CT----CT-T-A---------------A-----------gtt-----------t--g
i Hipposideros_armiger.JXIK01000431.1                     C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171                39552 35 +     43066 CA-AATA----A---------------ATCATCTAA-------------A---TGA---A-GG-----CT----CT-T-A---------------A-----------GTT-----------T--G
i Hipposideros_galeritus.HipGal_scaffold_29171            C 0 C 0
s Hoolock_leuconedys.ctg274                                     429005 35 +    630532 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--T
i Hoolock_leuconedys.ctg274                                  C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                   32994 37 +     55795 CA-AGTA----AA--------------ATCATCCAA-------------A---TAA---AA-----T-CT----CT-TTA---------------A-----------GTT-----------A--A
i Hyaena_hyaena.HyaHya_flattened_line_26932               C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117             19592 32 -    143317 GA-AATA----A---------------GTCATCTAA-------------A---AG------G------TT----TT-C-A---------------A-----------ATT-----------A--C
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117         C 0 C 0
s Hylobates_agilis.k141_307679                                11923 35 -     15490 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--T
i Hylobates_agilis.k141_307679                            C 0 C 0
s Hylobates_klossii.k141_282416                               53928 35 +     67168 CA-AACA----A---------------AACATCTAA-------------A---AGAAGT---------CC----TT-T-A---------------C-----------ATT-----------T--T
i Hylobates_klossii.k141_282416                           C 0 C 0
s Hylobates_pileatus_b.LG02                                      189537375 35 - 191637585 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-C-A---------------C-----------GTT-----------T--T
i Hylobates_pileatus_b.LG02                                      C 0 C 0
s Hylobates_pileatus_a.tarseq_633                             3330473 35 -  11177569 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-C-A---------------C-----------GTT-----------T--T
i Hylobates_pileatus_a.tarseq_633                           C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       80681 31 +    135385 GA-AATA----A---------------GTCATCTAA-------------A---AA-------------TT----TT-T-A---------------A-----------ATT-----------A--T
i Hystrix_cristata.HysCri_scaffold_5660                   C 0 I 1
s Ictidomys_tridecemlineatus.JH393364.1                     7514321 35 -   7955117 CA-AATA----A---------------GTCATTTAA----------AAGA---Ag-----------g-ct----tt-t-c---------------a-----------att-----------a--a
i Ictidomys_tridecemlineatus.JH393364.1                   C 0 C 0
s Indri_indri.k141_3655594                                    17900 32 +     31101 CA-AAAA----C---------------GTCATCTAA-------------A---AGA------------TT----TT-T-A---------------A-----------ATG-----------T--A
i Indri_indri.k141_3655594                                C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101                22137 28 +     23964 ---------------------------ATCATTTAA-------------A---TGA---A-GG-----CT----CT-T-G---------------A-----------GTT-----------C--A
i Inia_geoffrensis.IniGeo_flattened_line_48101            I 7 C 0
s Jaculus_jaculus.JH725527.1                                8271103 40 -   9596543 AA-AATT----A---------------GTCATGTAA-------------A---AG----AAGGGAAg-gt----ttca-g---------------a-----------ttt-----------t--t
i Jaculus_jaculus.JH725527.1                              C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                 1404 28 -      3359 ---------------------------ATCATCTAA-------------A---TGA---A-GG-----CT----CT-T-G---------------A-----------GTT-----------T--A
i Kogia_breviceps.KogBre_flattened_line_192630            I 7 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                     11642 35 -     42476 CA-AATA----A---------------ATCATCTAA-------------A---TAA---A-GG-----CT----CT-T-A---------------A-----------GTT-----------T--T
i Lasiurus_borealis.LasBor_scaffold_32767                 C 0 C 0
s Lepilemur_ankaranensis.k141_596936                           6532 32 -     23766 CA-ACAA----T---------------GTCATCTAA-------------A---AGA------------TT----TT-T-A---------------A-----------ATG-----------T--A
i Lepilemur_ankaranensis.k141_596936                      C 0 C 0
s Lepilemur_dorsalis.k141_577674                              24479 32 +     45836 CA-ACAA----T---------------GTCATCTAA-------------A---AGA------------TT----TT-T-A---------------A-----------ATG-----------T--A
i Lepilemur_dorsalis.k141_577674                          C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                          31389 32 -     32627 CA-AAAA----T---------------GTCATCTAA-------------A---AGA------------TT----TT-T-A---------------A-----------ATG-----------T--A
i Lepilemur_ruficaudatus.k141_420445                      C 0 C 0
s Lepilemur_septentrionalis.k141_185316                       22537 32 +     54090 CA-ACAA----T---------------GTCATCTAA-------------A---AGA------------TT----TT-T-A---------------A-----------ATG-----------T--A
i Lepilemur_septentrionalis.k141_185316                   C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        3035847 23 +   3914936 ----GTA----A---------------ATCATCTAA-------------A---TGA-----GG---t-ct----c--------------------------------------------------
i Leptonychotes_weddellii.KB714746.1                      C 0 I 9
s Lepus_americanus.LepAme_scaffold_107385                      3346 18 -     14121 -----------------------------------------------------AGA----TG----C-CT----TT-T-A---------------A-----------ATT-----------T--T
i Lepus_americanus.LepAme_scaffold_107385                 I 15 C 0
s Lipotes_vexillifer.KE559953.1                              267218 28 -    662738 ---------------------------ATCATCTAA-------------A---TGA---A-GG-----CT----CT-T-g---------------a-----------gtt-----------t--a
i Lipotes_vexillifer.KE559953.1                           I 7 C 0
s Lophocebus_aterrimus.ctg367                               1431189 35 +   1826925 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--A
i Lophocebus_aterrimus.ctg367                             C 0 C 0
s Loris_lydekkerianus.k141_2539221                              466 17 +     11245 -----------------------------c-------------------a---aga------------tt----tc-t-c---------------a-----------ata-----------t--a
i Loris_lydekkerianus.k141_2539221                        I 2 C 0
s Loris_tardigradus.ctg83                                    999301 17 +   6120653 -----------------------------c-------------------a---aga------------tt----tc-t-c---------------a-----------ata-----------t--a
i Loris_tardigradus.ctg83                                 I 2 C 0
s Loxodonta_africana.GL010049.1                             4214204 56 -  43346337 ca-aaca----a---------------tgcaactaaattaaaaaaaaaaa---tga--------agg-ct----tt-t-g---------------aaatttgtgtatat----------------
i Loxodonta_africana.GL010049.1                           C 0 C 0
s Lycaon_pictus.CM007581.1                                 17951460 35 -  59628241 CA-AGTA----A---------------ATCATCTAA-------------A---TGA---TA---A---ct----ct-t-a---------------a-----------gtt-----------t--a
i Lycaon_pictus.CM007581.1                                C 0 C 0
s Macaca_arctoides.k141_2326796                                1377 35 +     40492 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--A
i Macaca_arctoides.k141_2326796                           C 0 C 0
s Macaca_assamensis.Contig5                                59670637 35 +  60120075 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--A
i Macaca_assamensis.Contig5                               C 0 C 0
s Macaca_cyclopis.k119_18836                                   7135 35 -     26193 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--A
i Macaca_cyclopis.k119_18836                              C 0 C 0
s Macaca_fascicularis.k141_814140                             74926 35 -    114318 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--A
i Macaca_fascicularis.k141_814140                         C 0 C 0
s Macaca_fuscata.k119_255327                                    648 35 -     23192 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--A
i Macaca_fuscata.k119_255327                              C 0 C 0
s Macaca_leonina.k141_3550399                                 10097 35 -     29190 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--A
i Macaca_leonina.k141_3550399                             C 0 C 0
s Macaca_maura.k141_2733130                                   18668 35 +     37952 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--A
i Macaca_maura.k141_2733130                               C 0 C 0
s Macaca_mulatta.NC_041758.1                              186833756 35 + 187317192 CA-AACA----A---------------AACATCTAA-------------A---AGAagg---------ct----tt-t-a---------------c-----------att-----------t--a
i Macaca_mulatta.NC_041758.1                              C 0 C 0
s Macaca_nemestrina.KQ007038.1                             25452314 35 -  25927173 CA-AACA----A---------------AACATCTAA-------------A---AGAagg---------ct----tt-t-a---------------c-----------att-----------t--a
i Macaca_nemestrina.KQ007038.1                            C 0 C 0
s Macaca_nigra.k141_1655396                                   74517 35 +     89720 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--A
i Macaca_nigra.k141_1655396                               C 0 C 0
s Macaca_radiata.k141_3680011                                  1514 35 +     20474 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--A
i Macaca_radiata.k141_3680011                             C 0 C 0
s Macaca_siberu.k141_635500                                    1315 35 -     14993 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--A
i Macaca_siberu.k141_635500                               C 0 C 0
s Macaca_silenus.Contig273                                   323947 35 -    668171 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--A
i Macaca_silenus.Contig273                                C 0 C 0
s Macaca_thibetana.k99_7456                                   15457 35 -     15935 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--A
i Macaca_thibetana.k99_7456                               C 0 C 0
s Macaca_tonkeana.k141_1498238                                20253 35 -     45290 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--A
i Macaca_tonkeana.k141_1498238                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                  87305 35 +     94391 CA-AATA----A---------------GTCATCTAA-------------A---TGA---A-GG-----CT----CT-T-A---------------C-----------ATT-----------T--A
i Macroglossus_sobrinus.MacSob_scaffold_8222              C 0 C 0
s Mandrillus_leucophaeus.scaffold280                       23931807 35 -  24302211 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--A
i Mandrillus_leucophaeus.scaffold280                      C 0 C 0
s Mandrillus_sphinx.Contig270                                345987 35 +    752769 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--A
i Mandrillus_sphinx.Contig270                             C 0 C 0
s Manis_javanica.JSZB01003497.1                               15336 35 +    737560 CA-AATA----AATCACATTCCATTTTATCCCATAA-------------A---TGA---------------------------------------------------------------------
i Manis_javanica.JSZB01003497.1                           C 0 I 12
s Manis_pentadactyla.KN006162.1                               46725 35 -    317179 CA-AATA----AATCACATTCCATTTCATCCCATAA-------------A---TGa---------------------------------------------------------------------
i Manis_pentadactyla.KN006162.1                           C 0 I 12
s Marmota_marmota.CZRN01000018.1                           33097175 34 -  40650429 CA-AATA----A---------------GTCATTTAA----------AAGA---Ag-----------g-ct----tt-t-c---------------a-----------at------------t--a
i Marmota_marmota.CZRN01000018.1                          C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                          6559 35 -    207569 CA-AATA----A---------------ATCATCTCA-------------A---TGA---A-GG-----CT----CT-T-A---------------A-----------GTT-----------T--A
i Megaderma_lyra.MegLyr_scaffold_4542                     C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365               5975 35 +     13704 CA-AGTA----A---------------ATCATCTAA-------------A---TGA---A-G----T-CT----TT-T-A---------------A-----------GTT-----------T--A
i Mellivora_capensis.MelCap_flattened_line_69365          C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                     2805 28 +     10310 ---------------------------ATTATCTAA-------------A---TGA---A-GG-----CT----CT-T-G---------------A-----------GTT-----------T--A
i Mesoplodon_bidens.MesBid_scaffold_108144                I 7 C 0
s Microcebus_murinus.CM007674.1                            18283058 32 -  93316391 CA-AAAG----C---------------ATcatctaa-------------a---aga------------tt----tt-t-a---------------a-----------atg-----------t--a
i Microcebus_murinus.CM007674.1                           C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                     15200 34 -    145209 CA-AATA----A---------------TGCATCTAA-------------A---T-A---A-GG-----CT----CT-T-A---------------A-----------GTT-----------T--T
i Microgale_talazaci.MicTal_scaffold_6613                 C 0 I 2
s Micronycteris_hirsuta.MicHir_scaffold_52381                 13162 36 -     19307 CA-AATA----A---------------ATCATCTAA-------------A---CAA---ACG------CT----CT-T-A-A-------------A-----------GTT-----------T--A
i Micronycteris_hirsuta.MicHir_scaffold_52381             C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                     1848594 35 +   8254450 CA-AATA----A---------------ATCATCTAA-------------A---TAA---A-G--A---GT----CG-T-a---------------a-----------gtt-----------t--a
i Miniopterus_natalensis.LDJU01000034.1                   C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080              32463 35 +     64694 CA-AATA----A---------------ATCATCTAA-------------A---TAA---A-G--A---GT----CG-T-A---------------A-----------GTT-----------T--A
i Miniopterus_schreibersii.MinSch_scaffold_18080          C 0 C 0
s Miopithecus_ogouensis.k141_534055                            3544 35 -     28506 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--T
i Miopithecus_ogouensis.k141_534055                       C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144         62177 23 -     63350 ----GTA----A---------------ATCATCTAA-------------A---TGA-----GG---T-CT----C--------------------------------------------------
i Mirounga_angustirostris.MirAng_flattened_line_22144     C 0 I 9
s Mirza_zaza.k141_952172                                       4419 32 -     37649 CA-AAAA----T---------------GTCGTCTAA-------------A---AGA------------TT----TT-T-A---------------A-----------ATG-----------T--A
i Mirza_zaza.k141_952172                                  C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                     26310 28 -    437263 ---------------------------ATCATCTAA-------------A---TGA---A-GG-----CT----CT-T-G---------------A-----------GTT-----------T--A
i Monodon_monoceros.MonMon_M_scaffold_103                 I 7 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                  137566 36 -    366855 CA-AATA----A---------------ACCATCTAA-------------A---CAA----TGG-----CT----CT-T-A-A-------------A-----------GTT-----------T--A
i Mormoops_blainvillei.MorMeg_scaffold_1417               C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                    24077 36 +     37127 CA-AGTA----AA--------------ATTATCCAA-------------A---TAA---A-G----T-CT----CT-T-A---------------A-----------GTT-----------T--A
i Mungos_mungo.MunMun_flattened_line_23663                C 0 C 0
s Murina_feae.MurFea_scaffold_85699                            4652 35 +     14753 CA-AATA----A---------------ATCATCTAA-------------A---TAA---A-GG-----CT----CT-T-A---------------A-----------GTT-----------T--A
i Murina_feae.MurFea_scaffold_85699                       C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313               2092 16 +     14296 AA-AATA----T---------------ATTATCTTA-----------------------------------------------------------------------------------------
i Muscardinus_avellanarius.MusAve_scaffold_82313          C 0 I 17
s Mustela_putorius.JH418006.1                                297397 35 -  14710649 CA-AGTA----A---------------ATCATCTAA-------------A---TGA---A-G----T-CT----CT-T-A---------------A-----------GTT-----------T--A
i Mustela_putorius.JH418006.1                             C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                      70871 25 -     80779 ---------------------------GTTACATAA-------------A---AG------G------TT----TT-T-A---------------A-----------ATT-----------T--A
i Myocastor_coypus.MyoCoy_scaffold_10123                  I 3 C 0
s Myotis_brandtii.KE162005.1                                 277760 35 -  10118263 CA-AATA----A---------------ATCATCTAA-------------A---TAA---A-GG-----CT----CT-T-A---------------A-----------GTT-----------T--A
i Myotis_brandtii.KE162005.1                              C 0 C 0
s Myotis_davidii.KB100139.1                                 1585331 35 -   6019432 CA-AATA----A---------------ATCATCTAA-------------A---TAA---A-GG-----CT----CT-T-A---------------A-----------GTT-----------T--A
i Myotis_davidii.KB100139.1                               C 0 C 0
s Myotis_lucifugus.GL429869.1                               3901548 35 -   4330536 CA-AATA----A---------------ATCATCTAA-------------A---TAA---A-GG-----CT----CT-T-A---------------A-----------GTT-----------T--A
i Myotis_lucifugus.GL429869.1                             C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                         32097 35 +     33610 CA-AATA----A---------------ATCATCTAA-------------A---TAA---A-GG-----CT----CT-T-A---------------A-----------GTT-----------T--A
i Myotis_myotis.MyoMyo_scaffold_28916                     C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081               185829 17 +    196477 AA-AATT----A---------------TTCATCTAA-------------A---------------------------------------------------------------------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081            C 0 I 15
s Nannospalax_galili.KL204047.1                             2025256 35 -   3037898 CA-AATG----A---------------GTCCACTAA----------ACAA---Aa-----------g-ct----tt-c-a---------------g-----------att-----------t--t
i Nannospalax_galili.KL204047.1                           I 35 C 0
s Nasalis_larvatus.k141_413338                                 9555 37 +     21681 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------AAAA
i Nasalis_larvatus.k141_413338                            C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                    5865266 28 +   7148211 ---------------------------ATCATCTAA-------------A---TGA---A-GG-----CT----CT-T-g---------------a-----------gtt-----------t--a
i Neophocaena_asiaeorientalis.KZ687982.1                  I 7 C 0
s Noctilio_leporinus.NocLep_scaffold_251                     756125 37 +    783361 CA-AATG----A---------------AGCATCGAA-------------A---CAA---A-GG-----CT----CT-T-A-A-------------A----------GTTT-----------T--A
i Noctilio_leporinus.NocLep_scaffold_251                  C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                9145721 35 -   9404916 CA-AGTA----A---------------ATCATCTAA-------------A---TGA---TA---A---ct----ct-t-a---------------a-----------gtt-----------t--a
i Nyctereutes_procyonoides.CAJHUB010000658.1              C 0 C 0
s Nycticebus_bengalensis.LG01                             102574269 17 - 196305487 -----------------------------c-------------------a---aga------------tt----tc-t-c---------------a-----------atA-----------T--A
i Nycticebus_bengalensis.LG01                             I 2 C 0
s Nycticebus_coucang.k141_5327727                              1955 17 +      8486 -----------------------------c-------------------a---aga------------tt----tc-t-c---------------a-----------aTA-----------T--A
i Nycticebus_coucang.k141_5327727                         I 2 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        105744697 17 + 199412804 -----------------------------c-------------------a---aga------------tt----tc-t-c---------------a-----------ata-----------t--a
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        I 2 C 0
s Odobenus_rosmarus.KB229312.1                               500463 35 -   2017862 CA-AGTA----A---------------ATCACCTAA-------------A---TGA-----GG---t-ct----ct-t-a---------------c-----------att-----------t--a
i Odobenus_rosmarus.KB229312.1                            C 0 C 0
s Orcinus_orca.KB316932.1                                   2781181 28 -  10937097 ---------------------------ATCACCTAA-------------A---TGA---A-GG-----CT----CT-T-g---------------a-----------gtt-----------t--a
i Orcinus_orca.KB316932.1                                 I 7 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387                6560 35 -     18566 TA-AATA----A---------------TGCATCTAA-------------A---TGA---A-GG-----CT----TT-T-A---------------G-----------GTT-----------A--A
i Orycteropus_afer.OryAfe_flattened_line_144387           C 0 I 3
s Oryctolagus_cuniculus.CM000791.1                         67144188 18 + 174332312 -----------------------------------------------------AGA---------tgcct----tt-t-a---------------a-----------att-----------t--t
i Oryctolagus_cuniculus.CM000791.1                        I 15 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        458475 35 -    559221 CA-AGTA----A---------------ATCATCTAA-------------A---TGA-----G--AA--ct----ct-t-a---------------a-----------gtt-----------t--a
i Otocyon_megalotis.JAEUCK010005147.1                     C 0 C 0
s Pan_paniscus.KQ411613.1                                     35942 33 +     80009 CA-AACA----A---------------AACATCTAA-------------A---AGAAgg---------ct----tt-t-a---------------c-----------att---------------
i Pan_paniscus.KQ411613.1                                 C 0 I 1
s Pan_troglodytes.CM009242.2                              187628639 35 + 189151597 CA-AACA----A---------------AACATCTAA-------------A---AGAAgg---------ct----tt-t-a---------------c-----------att-----------a--a
i Pan_troglodytes.CM009242.2                              N 0 N 0
s Panthera_onca.PanOnc_flattened_line_3271                   140340 33 +    230217 ----GTA----AA--------------ATCATCTAA-------------A---TTA---A-G----T-CT----CT-T-A---------------A-----------GTT-----------T--A
i Panthera_onca.PanOnc_flattened_line_3271                C 0 C 0
s Panthera_pardus.KV860321.1                                 251869 33 +  18783137 ----GTA----AA--------------ATCATCTAA-------------A---TTA---A-G----T-ct----ct-t-a---------------a-----------gtt-----------t--a
i Panthera_pardus.KV860321.1                              C 0 C 0
s Panthera_tigris.KE722367.1                                4710311 36 -   8748460 CA-AGTA----AA--------------ATCATCTAA-------------A---TTA---A-G----T-ct----ct-t-a---------------a-----------gtt-----------t--a
i Panthera_tigris.KE722367.1                              C 0 C 0
s Papio_anubis.CM001495.2                                 183437129 35 + 183742232 CA-AACA----A---------------AACATCTAA-------------A---AGAagg---------ct----tt-t-a---------------c-----------att-----------t--t
i Papio_anubis.CM001495.2                                 C 0 C 0
s Papio_cynocephalus.k141_4307930                              1191 35 +     20448 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--T
i Papio_cynocephalus.k141_4307930                         C 0 C 0
s Papio_hamadryas.Contig39                                 20557813 35 +  20919399 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--T
i Papio_hamadryas.Contig39                                C 0 C 0
s Papio_kindae.k141_4051466                                    1391 35 -      1598 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--T
i Papio_kindae.k141_4051466                               C 0 C 0
s Papio_papio.k141_802527                                      3223 35 +     27711 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--T
i Papio_papio.k141_802527                                 C 0 C 0
s Papio_ursinus.k141_3428135                                   3212 35 +      9205 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--T
i Papio_ursinus.k141_3428135                              C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_163540      1140 36 +      1892 CA-AGTA----AA--------------ATCATCTAA-------------A---TGA---A-G----T-CT----CT-T-A---------------A-----------GAT-----------T--A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_163540 I 241 n 36
s Perodicticus_ibeanus.k141_855320                             4439 26 +     13100 ta-ataa----a---------------tcc-------------------a---aga------------tt----tc-t-c---------------a-----------ata-----------t--a
i Perodicticus_ibeanus.k141_855320                        C 0 C 0
s Perodicticus_potto.k141_1092580                              2807 26 +     25941 ta-ataa----a---------------tcc-------------------a---aga------------tt----tc-t-c---------------a-----------ata-----------t--a
i Perodicticus_potto.k141_1092580                         C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437        25108 24 +     32600 CA-AGTA----A---------------GTAATCTAA-------------A---AA----A--------CC----TC-------------------------------------------------
i Perognathus_longimembris.PerPac_flattened_line_34437    C 0 I 7
s Petromus_typicus.PetTyp_scaffold_42190                      25609 31 -     29689 GA-AATA----A---------------ATCATCTAA-------------A---AA-------------GT----TT-T-A---------------A-----------ATT-----------A--T
i Petromus_typicus.PetTyp_scaffold_42190                  C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159                8228 28 +     63832 ---------------------------ATCATCTAA-------------A---TGA---A-GG-----CT----CT-T-G---------------A-----------GTT-----------T--A
i Phocoena_phocoena.PhoPho_flattened_line_24159           I 7 C 0
s Piliocolobus_badius.k141_1234363                            38074 35 +     62158 CA-AACA----A---------------AATATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--A
i Piliocolobus_badius.k141_1234363                        C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         32801 35 +     89929 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--A
i Piliocolobus_gordonorum.k141_381342                     C 0 C 0
s Piliocolobus_kirkii.k141_448987                             34217 35 +     51399 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--A
i Piliocolobus_kirkii.k141_448987                         C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                 14290436 35 -  14605196 CA-AACA----A---------------AACATCTAA-------------A---AGAAgg---------ct----tt-t-a---------------c-----------att-----------a--a
i Piliocolobus_tephrosceles.PDMG02000141.1                C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_7723              79118 35 +     79650 CA-AATA----A---------------ATCATCTAA-------------A---TAA---A-GG-----CT----CT-T-A---------------T-----------GTT-----------T--A
i Pipistrellus_pipistrellus.PipPip_scaffold_7723          C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310            33940 13 +     35617 ---------------------------ATCATCTAA-------------A---TGA---------------------------------------------------------------------
i Platanista_gangetica.PlaMin_flattened_line_32310        I 7 I 9
s Pongo_abelii.CM009266.2                                 189124977 35 + 189387572 CA-AACA----A---------------AACATCTAA-------------A---AGAagg---------ct----tt-t-a---------------c-----------att-----------t--a
i Pongo_abelii.CM009266.2                                 C 0 C 0
s Pongo_pygmaeus.ctg66                                      9564820 35 +   9816681 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--A
i Pongo_pygmaeus.ctg66                                    C 0 C 0
s Presbytis_comata.k141_677006                                67713 35 -     81375 CA-AACA----A---------------AACATCTAA-------------A---AGAAAG---------CT----TT-T-A---------------C-----------ATT-----------A--A
i Presbytis_comata.k141_677006                            C 0 C 0
s Presbytis_mitrata.k141_2342859                               9537 35 +     10147 CA-AACA----A---------------AACATCTAA-------------A---AGAAAT---------CT----TT-T-A---------------C-----------ATT-----------A--A
i Presbytis_mitrata.k141_2342859                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                   9717 28 -     22811 -----------------------------------------------------TGA---A-GG-----CT----TT-T-CTACTGAACAAGAAAAA-----------------------------
i Procavia_capensis.ProCapCap_scaffold_85530              I 17 C 0
s Propithecus_coquerelli.NW_012148875.1                      985773 32 +   2598838 AG-AAAA----C---------------GTCatctaa-------------a---aga------------tt----tt-t-a---------------a-----------atg-----------t--a
i Propithecus_coquerelli.NW_012148875.1                   C 0 C 0
s Propithecus_coronatus.k141_347390                           24061 32 +     38485 AG-AAAA----C---------------GTCATCTAA-------------A---AGA------------TT----TT-T-A---------------A-----------ATG-----------T--A
i Propithecus_coronatus.k141_347390                       C 0 C 0
s Propithecus_diadema.k141_357118                               223 32 +      4256 AG-AAAA----C---------------GTCATCTAA-------------A---AGA------------TT----TT-T-A---------------A-----------ATG-----------T--A
i Propithecus_diadema.k141_357118                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                           21581 32 +     35766 AG-AAAA----C---------------GTCATCTAA-------------A---AGA------------TT----TT-T-A---------------A-----------ATG-----------T--A
i Propithecus_edwardsi.k141_1176054                       C 0 C 0
s Propithecus_perrieri.k141_1630595                           16860 32 +     17239 AG-AAAA----C---------------GTCATCTAA-------------A---AGA------------TT----TT-T-A---------------A-----------ATG-----------T--A
i Propithecus_perrieri.k141_1630595                       C 0 C 0
s Propithecus_tattersalli.k141_790011                         23575 32 -     67325 AG-AAAA----C---------------GTCATCTAA-------------A---AGA------------TT----TT-T-A---------------A-----------ATG-----------T--A
i Propithecus_tattersalli.k141_790011                     C 0 C 0
s Propithecus_verreauxi.k141_1019028                          13291 32 -     13615 AG-AAAA----C---------------GTCATCTAA-------------A---AGA------------TT----TT-T-A---------------A-----------ATG-----------T--A
i Propithecus_verreauxi.k141_1019028                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                             10945 36 -     21811 CA-AATA----A---------------ATCATCTAA-------------A---CAA---A-GG-----ct----ct-t-a--------------aa-----------gtt-----------a--a
i Pteronotus_parnellii.KE909381.1                         C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117          36418 35 +     42204 CA-AGTA----A---------------ATCATCTAA-------------A---TGA---A-G----T-CT----CT-T-A---------------A-----------GTT-----------T--A
i Pteronura_brasiliensis.PteBra_flattened_line_31117      C 0 C 0
s Pteropus_alecto.KB030862.1                               22973435 35 +  28871421 CA-AATA----A---------------GTCATCTAA-------------A---TGA---A-----gg-ct----ct-t-a---------------c-----------att-----------t--a
i Pteropus_alecto.KB030862.1                              C 0 C 0
s Pteropus_vampyrus.KN534172.1                                 1371 35 -      8028 CA-AATA----A---------------GTCATCTAA-------------A---TGA---A-----gg-ct----ct-t-a---------------c-----------att-----------t--a
i Pteropus_vampyrus.KN534172.1                            C 0 C 0
s Puma_concolor.QAVW01001104.1                             20262846 36 -  38429054 CA-AGTA----AA--------------ATCATCTAA-------------A---TTA---A-G----T-CT----CT-T-A---------------A-----------Gtt-----------t--a
i Puma_concolor.QAVW01001104.1                            C 0 C 0
s Pygathrix_cinerea.k141_1153803                               9541 37 -     91421 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------AAAA
i Pygathrix_cinerea.k141_1153803                          C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  7603675 37 +   7812017 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------AAAA
i Pygathrix_nigripes_b.ctg100                                C 0 C 0
s Pygathrix_nigripes_a.k141_215492                               9513 37 -     72585 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------AAAA
i Pygathrix_nigripes_a.k141_215492                          C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                         366661 29 -   3329780 CA-AATA----A---------------ATCATCTAA-------------A---TGA---A-GG-----CT----CT-T-A---------------------------------------------
i Rhinolophus_sinicus.LVEH01000134.1                      C 0 I 5
s Rhinopithecus_bieti.k119_217274                               927 37 -     11128 CA-AGCA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------AAAA
i Rhinopithecus_bieti.k119_217274                         C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                      91230305 37 - 195417433 CA-AGCA----A---------------AACATCTAA-------------A---AGAAgg---------ct----tt-t-a---------------c-----------att-----------aaaa
i Rhinopithecus_roxellana.NC_044550.1                     C 0 C 0
s Rhinopithecus_strykeri.ctg102                             7666013 37 +   7961872 CA-AGCA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------AAAA
i Rhinopithecus_strykeri.ctg102                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                 84418 35 -     96226 CA-AATA----A---------------GTCATCTAA-------------A---TGA---A-GG-----CT----CT-T-A---------------A-----------ATT-----------T--A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038             C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                     151135 28 -    313613 ---------------------------ATTATCAAA-------------A---TGA---A-GG-----TT----CT-T-A---------------A-----------GTT-----------T--A
i Scalopus_aquaticus.ScaAqu_scaffold_662                  I 3 C 0
s Semnopithecus_entellus.k141_11662                           14056 36 -     19888 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TC-T-A---------------C-----------ATT-----------A-AA
i Semnopithecus_entellus.k141_11662                       C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                       21262 36 +     39453 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------A-AA
i Semnopithecus_hypoleucos.k141_1615806                   C 0 C 0
s Semnopithecus_johnii.k141_670120                             1786 36 +     27826 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------A-AA
i Semnopithecus_johnii.k141_670120                        C 0 C 0
s Semnopithecus_priam.k141_638794                              1306 36 -     19483 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------A-AA
i Semnopithecus_priam.k141_638794                         C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                       1370 36 +      7198 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TC-T-A---------------C-----------ATT-----------A-AA
i Semnopithecus_schistaceus.k141_1584426                  C 0 C 0
s Semnopithecus_vetulus.k141_1200928                           9628 36 +     15514 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------A-AA
i Semnopithecus_vetulus.k141_1200928                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840             187441 31 -    191337 ------A----AA--------------ACAATCTAA-------------A---TGA---A-GG-----TT----CT-T-G---------------A-----------GTT-----------T--T
i Solenodon_paradoxus.SolPar_flattened_line_5840          C 0 C 0
s Sorex_araneus.JH798187.1                                 13646808 31 -  18376816 ------T----AA--------------ATCATCTAA-------------A---TGA---A-G--A---CT----CT-T-G---------------G-----------ATT-----------T--T
i Sorex_araneus.JH798187.1                                C 0 C 0
s Spermophilus_dauricus.KZ294078.1                          1947963 35 -   3870691 CA-AATA----A---------------GTCATTTAA----------AAGA---Ag-----------g-ct----tt-t-c---------------a-----------att-----------a--a
i Spermophilus_dauricus.KZ294078.1                        C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              26960 35 +     97271 CA-AGTA----A---------------GTCATCTAA-------------A---TGA---A-G----T-CT----CT-T-A---------------A-----------GTT-----------T--A
i Spilogale_gracilis.SpiGra_flattened_line_13525          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629                6913 36 -    196729 CA-AGTT----AA--------------GTTATCCAA-------------A---TAA---A-G----T-CT----CT-T-A---------------A-----------GTT-----------T--A
i Suricata_suricatta.SurSur_flattened_line_6629           C 0 C 0
s Sus_scrofa.CM000828.4                                    62882222 28 -  69701581 ---------------------------ATCATCTAA-------------G---TGA---A-G--A---AT----CA-T-G---------------A-----------Gtt-----------c--a
i Sus_scrofa.CM000828.4                                   I 7 C 0
s Symphalangus_syndactylus.tarseq_199                       1087610 35 -   1523678 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------T--T
i Symphalangus_syndactylus.tarseq_199                     C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                  6562 37 +     41958 CA-AATA----A---------------ATCATCTAA-------------A---TGA---A-GG-----CT----CT-T-C---------------A-----------GTT---------TTT--T
i Tadarida_brasiliensis.TadBra_scaffold_25820             C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                  69193 17 +    116680 AA-AATT----A---------------TTCATCTAA-------------A---------------------------------------------------------------------------
i Tamandua_tetradactyla.TamTet_scaffold_1782              C 0 I 15
s Tapirus_indicus.TapInd_scaffold_9301                       114939 35 -    156842 CA-AATA----A---------------ATCATCTAA-------------A---GGA---AAG------CT----CT-T-A---------------A-----------GTT-----------A--A
i Tapirus_indicus.TapInd_scaffold_9301                    C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                     383391 35 +    539355 CA-AATA----A---------------ATCATCTAA-------------A---CGA---AAG------CT----CT-T-C---------------A-----------GTT-----------A--A
i Tapirus_terrestris.TapTer_scaffold_755                  C 0 C 0
s Tarsius_lariang.k141_2201908                                10385 18 +     70052 C---AAA----T---------------GTCACTTAA-------------A---AGA---------------------------------------------------------------------
i Tarsius_lariang.k141_2201908                            C 0 I 7
s Tarsius_wallacei.k141_780063                                14690 18 +     25099 C---AAA----T---------------GTCACTTAA-------------A---AGA---------------------------------------------------------------------
i Tarsius_wallacei.k141_780063                            C 0 I 7
s Theropithecus_gelada.CM009954.1                         186422638 35 + 186847797 CA-AACA----A---------------AACATCTAA-------------A---AGAagg---------ct----tt-t-a---------------c-----------att-----------t--a
i Theropithecus_gelada.CM009954.1                         C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223               102769 31 +    114563 TA-AATA----A---------------ATCATCTAA-------------A---AA-------------GT----TT-T-a---------------a-----------aat-----------a--t
i Thryonomys_swinderianus.ThrSwi_scaffold_1223            C 0 I 180
s Tolypeutes_matacus.TolMat_scaffold_228639                    1599 34 +      8208 GA-AACA----A---------------TTCATCTAA-------------A---GGG---A-GG-----CT----CT-T-A-A-------------A-----------TTT---------------
i Tolypeutes_matacus.TolMat_scaffold_228639               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                      78707 36 +    610378 CA-AATA----A---------------ATCACCTAA-------------A---CAA---A-GG-----CT----CT-T-A-A-------------A-----------GTT-----------T--A
i Tonatia_saurophila.TonSau_scaffold_294                  C 0 C 0
s Trachypithecus_auratus.k141_722599                           5364 36 -     20410 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------A-AA
i Trachypithecus_auratus.k141_722599                      C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                      9558 36 +     15221 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------A-AA
i Trachypithecus_crepusculus.k141_1194022                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                         5464 36 +     19930 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------A-AA
i Trachypithecus_cristatus.k141_580354                    C 0 C 0
s Trachypithecus_francoisi.k141_1412647                        1892 36 -     19997 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------A-AA
i Trachypithecus_francoisi.k141_1412647                   C 0 C 0
s Trachypithecus_geei.k141_277701                             42012 35 -     60166 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------A--A
i Trachypithecus_geei.k141_277701                         C 0 C 0
s Trachypithecus_germaini.k141_912491                          9485 36 -     27529 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------A-AA
i Trachypithecus_germaini.k141_912491                     C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                       9421 36 -     18194 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------A-AA
i Trachypithecus_hatinhensis.k141_143409                  C 0 C 0
s Trachypithecus_laotum.k141_907409                            3160 36 -     21137 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------A-AA
i Trachypithecus_laotum.k141_907409                       C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                     1860 36 -     10723 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------A-AA
i Trachypithecus_leucocephalus.k141_587342                C 0 C 0
s Trachypithecus_melamera.k141_434728                          1016 36 +      9834 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------A-AA
i Trachypithecus_melamera.k141_434728                     C 0 C 0
s Trachypithecus_obscurus.k141_190785                         19330 36 +     32220 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------A-----------ATT-----------A-AA
i Trachypithecus_obscurus.k141_190785                     C 0 C 0
s Trachypithecus_phayrei.ctg124                             5933428 36 +   6242583 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------A-AA
i Trachypithecus_phayrei.ctg124                           C 0 C 0
s Trachypithecus_pileatus.k141_2007326                         2674 36 +     20839 CA-AACA----A---------------AACATCTAA-------------A---AGAAGG---------CT----TT-T-A---------------C-----------ATT-----------A-AA
i Trachypithecus_pileatus.k141_2007326                    C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                     220 28 -      1748 ---------------------------ATCATCTAA-------------A---TGA---AAG------CT----CT-T-G---------------A-----------GTT-----------T--A
i Tragulus_javanicus.TraJav_scaffold_140459               I 7 C 0
s Trichechus_manatus.JH594705.1                             4292122 34 +  10818551 CA-AATA----A---------------TGCATCTAA--------AGTAAA---TTA---ATG------CT----ct-t-a---------------------------------------------
i Trichechus_manatus.JH594705.1                           C 0 I 531
s Tupaia_chinensis.KB320699.1                               2149331 27 +   4065304 -------------------------------------------------------A----CG--A---CT----Ta-c-g---------------c-----------attcatttttttttt--t
i Tupaia_chinensis.KB320699.1                             I 9 C 0
s Tupaia_tana.TupTan_flattened_line_97126                      2954 23 -     10553 -------------------------------------------------------A---CAG------CT----TA-T-G---------------C-----------ATT----CATTTATT--T
i Tupaia_tana.TupTan_flattened_line_97126                 I 9 C 0
s Tursiops_truncatus.MRVK01000835.1                        15737428 28 +  33153633 ---------------------------ATCATCTAA-------------A---TGA---A-GG-----CT----CT-T-g---------------a-----------gtt-----------t--a
i Tursiops_truncatus.MRVK01000835.1                       I 7 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                    51264 35 -     77625 ------ACAATAA--------------AGCATTAAA-------------A---TGA---A-GG-----TA----CT-T-G---------------A-----------GTT-----------T--T
i Uropsilus_gracilis.UroGra_scaffold_12083                C 0 I 9
s Ursus_maritimus.KK499267.1                                4846658 35 -   5085361 CA-AGTA----A---------------ATCATCTAA-------------A---TGA---A-G----T-ct----ct-t-a---------------a-----------gtt-----------t--a
i Ursus_maritimus.KK499267.1                              C 0 C 0
s Vicugna_pacos.KN270157.1                                  5368127 30 -   5488506 ---------------------------ATCATCTAA-------------A---TGA---AA-----g-ct----ct-t-g---------------a-----------att-----------ttta
i Vicugna_pacos.KN270157.1                                I 7 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                   7136 35 -     43706 CA-AGTA----A---------------ATCATCTAA-------------A---TGA---TA---A---ct----ct-t-a---------------a-----------gtt-----------t--a
i Vulpes_lagopus.VulLag_flattened_line_30954              C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                         19458 35 -     24430 CA-AATA----A---------------GTCATTTAA----------AAGC---AG------G------CT----TT-T-C---------------A-----------ATT-----------T--A
i Xerus_inauris.XerIna_scaffold_48378                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728           1586 26 +      2932 CA-AGTA----A---------------ATCACCTAA-------------A---TGA-----GG---T-CT----C--------------------------------------------------
i Zalophus_californianus.ZalCal_flattened_line_63728      C 0 I 7
s Zapus_hudsonius.ZapHud_scaffold_11398                        9742 36 +     63895 AA-AATG----A---------------GTCATATAA-------------T---AG------G----T-TT----TTAA-G---------------A-----------TTT-----------TTTT
i Zapus_hudsonius.ZapHud_scaffold_11398                   C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469             11120 28 +     12536 ---------------------------ATTATCTAA-------------A---TGA---A-GG-----CT----CT-T-G---------------A-----------GTT-----------T--A
i Ziphius_cavirostris.ZipCav_flattened_line_71469         I 7 C 0
e Varecia_variegata.k141_1128296                               7155  0 +     24756 C
e Varecia_rubra.k141_590885                                    7107  0 +     50397 C
e Sigmodon_hispidus.SigHis_scaffold_60841                      9359  0 -     12148 C
e Saiga_tatarica.SaiTat_scaffold_373180                        3225 222 +      4321 I
e Rattus_norvegicus.chr8                                   20366427 90 + 133307652 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                   4576 218 +     55207 I
e Psammomys_obesus.NESX01036370.1                              5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                             2592414  0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                        18187645 53 -  18517816 I
e Pantholops_hodgsonii.KE114653.1                           1264036 222 -   2937107 I
e Ovis_canadensis.OviCan_scaffold_2572                       173103 222 -    191736 I
e Ovis_aries.CM001607.2                                    17584682 222 +  44047080 I
e Onychomys_torridus.OnyTor_scaffold_2986                     74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                    16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                           76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                          144328 218 +    630418 I
e Octodon_degus.JH651603.1                                   746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                              1355292  2 +   3988456 I
e Neomonachus_schauinslandi.NINY01007730.1                 20299037 6819 +  31847680 I
e Moschus_moschiferus.MosMos_scaffold_61429                   27091 222 -     27816 I
e Microtus_ochrogaster.CM001695.1                          11256415 59 -  27267610 I
e Mesocricetus_auratus.KB708134.1                          12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                  27995 59 +    140813 I
e Lemur_catta.scaffold_24                                  15519761  0 -  30322482 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                  17151 222 +     36099 I
e Hapalemur_occidentalis.k141_907772                           9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                           9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                               9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                               7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                            2517  0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                      608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                                9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                   2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                              9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                   6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                  8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                   9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                              8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                               11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                 2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                                9453  0 -     14127 C
e Ellobius_talpinus.LOJH01123422.1                             3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                           12497 60 -    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                        309953 220 +    607251 I
e Ctenodactylus_gundi.CteGun_scaffold_65                     834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                            11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                  46705 59 +     63868 I
e Capra_hircus.CM004588.1                                  18059667 222 -  44709034 I
e Capra_aegagrus.CM003241.1                                18828947 222 +  46296322 I
e Bubalus_bubalis.KI419123.1                                2818124 220 +   4408762 I
e Bos_taurus.CM000203.6                                    18082634 220 +  45695690 I
e Bos_mutus.JH880303.1                                      1124552 224 -   1948126 I
e Bos_indicus.CM003047.1                                   20271996 220 +  48749331 I
e Bison_bison.KN261452.1                                     198791 220 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                     25751 222 +     34529 I
e Antilocapra_americana.AntAmePen_scaffold_12469              97280 223 -    100397 I
e Ammotragus_lervia.NIVO01071767.1                           674829 222 -   2318259 I
e Acomys_cahirinus.AcoCah_scaffold_12655                      66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                        615 2 +     62944 A-A
s Acinonyx_jubatus.LLWD01001279.1                           816733 2 -   1699592 a-a
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506693 2 -  29979442 a-a
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             74984 2 -    347723 a-a
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64776 2 -     89534 A-A
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9088 2 -     52922 A-A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9013 2 -     28001 A-A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9139 2 -      9772 A-A
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            296 2 -     12518 A-A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      182886 2 +    412891 A-A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7022 2 +     20879 A-A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14232 1 +     17124 a--
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2238 2 +     43469 A-G
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  49075 2 -     92717 G-A
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              49700 2 +     85213 G-A
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191312 2 +  23207421 a-a
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         1778 2 -     18090 a-a
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998668 2 -  17673402 a-a
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331132 2 -   7040546 a-a
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399408 2 -   1652518 a-a
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795547 2 -  60362399 A-A
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181604 2 -    185531 A-A
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9030991 2 -   9314153 a-a
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955255 2 -  59632846 a-a
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496559 2 +  63665305 a-a
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                     709 2 -     12242 A-A
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           140794 2 -    496798 a-a
i Carlito_syrichta.NW_007259797.1                        I 7 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2656 2 -     11696 A-A
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133422 2 +    179628 T-A
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18347245 2 -  23392119 a-a
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18359505 2 -  23407841 a-a
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98380 2 +    143979 A-A
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         4711 2 -      8605 A-A
i Cephalopachus_bancanus.k141_2037105                    I 7 C 0
s Ceratotherium_simum.JH767749.1                          12227642 2 +  27778364 a-a
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2360 2 -      3715 A-A
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470057 2 +   4669795 a-a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8606 2 -     19203 A-A
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3025 2 +      8260 A-A
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3255 2 +     27781 A-A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3401 2 -     20310 A-A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6385 2 +     29689 A-A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             738 2 +      9989 A-A
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9073 2 -     27936 A-A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9092 2 -     11289 A-A
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811468 2 +  39242232 A-A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217159 2 -  21565898 A-A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34279 2 -     53127 A-A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1571 2 +      7159 A-A
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9084 2 -     27947 A-A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9060 2 +     17596 A-A
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39554 2 -     41420 A-A
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4577 1 -      6351 --A
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16490 2 -     52598 G-A
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           11839 2 +     57038 G-A
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1248275 2 +   2543920 a-a
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18423023 2 -  18827391 A-A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9466 2 -     50209 A-A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416471 2 + 135778131 a-a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 14901 3 +     19366 AAA
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            169996 3 +    839153 aaa
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_172426               9010 3 -     10935 AGT
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          I 3 C 0
s Colobus_angolensis.KN981557.1                            1904991 2 +   2368649 a-a
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944609 2 + 200372422 A-A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31503 2 +     84244 A-A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545751 2 -  53390261 a-a
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10273 2 -     20389 A-A
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_287352               194 2 +      4208 A-A
i Crocidura_indochinensis.CroInd_scaffold_287352         n 116 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_16129             17751 2 -     87169 A-A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35411 2 +     51376 A-A
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2621 2 +      5455 A-A
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1012 2 +      3576 A-A
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            60823 1 +   2246927 --a
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532670 2 -  12879189 G-A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16810948 2 +  35494412 a-a
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8627687 2 +  20541912 a-a
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669175 2 +   1390856 a-a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2250 2 +    198055 A-A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34071 2 +     67921 A-A
i Dinomys_branickii.DinBra_scaffold_21862                I 1 C 0
s Dipodomys_ordii.KN672350.1                              18895581 2 +  37912305 t-a
i Dipodomys_ordii.KN672350.1                             I 7 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  11791 2 +     14536 T-A
i Dipodomys_stephensi.DipSte_scaffold_75855              I 7 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31266 2 -     42551 A-A
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE759718.1                                   7197 2 +     11740 a-a
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1088774 3 +  10337057 agg
i Elephantulus_edwardii.JH947257.1                       I 3 C 0
s Enhydra_lutris.KZ291758.1                               16325545 2 -  41312741 a-a
i Enhydra_lutris.KZ291758.1                              C 0 I 1
s Eptesicus_fuscus.JH977646.1                              2143538 2 -  14770903 A-A
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279517 2 +   4378816 a-a
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527338 2 -  39960074 a-a
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29353 2 +    498745 a-a
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21199702 2 -  21539334 A-A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10624 2 +    133382 A-A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24562 2 -     44125 A-A
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.KN305074.1                                       397 2 -      2052 a-a
i Felis_catus.KN305074.1                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20185163 2 + 205367284 a-a
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_125938                10277 2 -     11347 A-A
i Felis_nigripes.FelNig_flattened_line_125938            C 0 C 0
s Fukomys_damarensis.KN121974.1                             848290 1 +   3816255 --a
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25219 2 +     26054 A-A
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30130 2 +     49224 A-A
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_2022027                               1263 2 +      3305 A-A
i Gorilla_beringei.k141_2022027                          C 0 C 0
s Gorilla_gorilla.CYUI03002401.1                              5486 2 +      7071 a-a
i Gorilla_gorilla.CYUI03002401.1                         C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   29858 2 +     78134 A-A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               230922 2 +    327341 A-A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20659170 1 +  22651954 a--
i Heterocephalus_glaber.JH602082.1                       C 0 I 1
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111804 2 +    128679 A-A
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108148 2 +   1711038 a-a
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39587 2 +     43066 A-A
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    429040 2 +    630532 A-A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  33031 3 +     55795 AAA
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19624 2 -    143317 A-A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_307679                               11958 2 -     15490 A-A
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              53963 2 +     67168 A-G
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189537410 2 - 191637585 A-A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3330508 2 -  11177569 A-A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80713 2 +    135385 A-A
i Hystrix_cristata.HysCri_scaffold_5660                  I 1 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514356 2 -   7955117 a-a
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   17932 2 +     31101 T-A
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22165 2 +     23964 A-A
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271143 2 -   9596543 t-a
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1432 2 -      3359 A-A
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    11677 2 -     42476 A-A
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6564 2 -     23766 G-A
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24511 2 +     45836 G-A
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31421 2 -     32627 G-A
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      22569 2 +     54090 G-A
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3035879 2 +   3914936 a-a
i Leptonychotes_weddellii.KB714746.1                     I 9 C 0
s Lepus_americanus.LepAme_scaffold_107385                     3364 2 -     14121 C-A
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             267246 2 -    662738 a-a
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1431224 2 +   1826925 A-A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             483 2 +     11245 g-a
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999318 2 +   6120653 g-a
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214260 3 -  43346337 ata
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951495 2 -  59628241 a-a
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               1412 2 +     40492 A-A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670672 2 +  60120075 A-A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7170 2 -     26193 A-A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            74961 1 -    114318 A--
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   683 2 -     23192 A-A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10132 2 -     29190 A-A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18703 2 +     37952 A-A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833791 2 + 187317192 a-a
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452349 2 -  25927173 a-a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74552 2 +     89720 A-A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1549 2 +     20474 A-A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1350 2 -     14993 A-A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  323982 2 -    668171 A-A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15492 2 -     15935 A-A
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20288 2 -     45290 A-A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87340 2 +     94391 G-A
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23931842 2 -  24302211 A-A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346022 2 +    752769 A-A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15383 2 +    737560 a-a
i Manis_javanica.JSZB01003497.1                          I 12 C 0
s Manis_pentadactyla.KN006162.1                              46772 2 -    317179 a-a
i Manis_pentadactyla.KN006162.1                          I 12 C 0
s Marmota_marmota.CZRN01000018.1                          33097209 2 -  40650429 a-a
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6594 2 -    207569 A-A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6010 2 +     13704 A-A
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 1
s Mesoplodon_bidens.MesBid_scaffold_108144                    2833 2 +     10310 A-A
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18283090 2 -  93316391 g-a
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    15236 3 -    145209 AGG
i Microgale_talazaci.MicTal_scaffold_6613                I 2 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13198 2 -     19307 A-A
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1848629 2 +   8254450 a-a
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32498 2 +     64694 A-A
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3579 2 -     28506 A-A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62209 2 -     63350 A-A
i Mirounga_angustirostris.MirAng_flattened_line_22144    I 9 C 0
s Mirza_zaza.k141_952172                                      4451 2 -     37649 G-A
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26338 2 -    437263 A-A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137602 2 -    366855 A-A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   24113 2 +     37127 A-A
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           4687 2 +     14753 A-A
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2125 2 +     14296 A-A
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 17 C 0
s Mustela_putorius.JH418006.1                               297432 2 -  14710649 A-A
i Mustela_putorius.JH418006.1                            C 0 I 1
s Myocastor_coypus.MyoCoy_scaffold_10123                     70896 2 -     80779 A-A
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                277795 2 -  10118263 A-A
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585366 2 -   6019432 A-A
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3901583 2 -   4330536 A-A
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32132 2 +     33610 A-A
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              185861 3 +    196477 AAA
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 15 C 0
s Nannospalax_galili.KL204047.1                            2025291 2 -   3037898 t-t
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                                9592 2 +     21681 A-A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865294 2 +   7148211 a-a
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756162 2 +    783361 A-A
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145756 2 -   9404916 a-a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102574286 2 - 196305487 G-A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             1972 2 +      8486 G-A
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744714 2 + 199412804 g-a
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                              500498 2 -   2017862 a-a
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Orcinus_orca.KB316932.1                                  2781209 2 -  10937097 a-a
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6598 3 -     18566 AGA
i Orycteropus_afer.OryAfe_flattened_line_144387          I 3 C 0
s Oryctolagus_cuniculus.CM000791.1                        67144206 2 + 174332312 c-a
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458510 2 -    559221 a-a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Pan_paniscus.KQ411613.1                                    35976 2 +     80009 a-a
i Pan_paniscus.KQ411613.1                                I 1 C 0
s Pan_troglodytes.CM009242.2                             189136926 2 + 189151597 a-a
i Pan_troglodytes.CM009242.2                             N 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  140373 2 +    230217 A-A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                251902 2 +  18783137 a-a
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4710347 2 -   8748460 a-a
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183437164 2 + 183742232 a-a
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1226 2 +     20448 A-A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20557848 2 +  20919399 A-A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_4051466                                   1426 2 -      1598 A-A
i Papio_kindae.k141_4051466                              C 0 C 0
s Papio_papio.k141_802527                                     3258 2 +     27711 A-A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  3247 2 +      9205 A-A
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      1172 2 -     78924 A-A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 36 C 0
s Perodicticus_ibeanus.k141_855320                            4465 1 +     13100 a--
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             2833 1 +     25941 A--
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25139 2 +     32600 T-A
i Perognathus_longimembris.PerPac_flattened_line_34437   I 7 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25640 2 -     29689 A-A
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8256 2 +     63832 A-A
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38109 2 +     62158 A-A
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        32836 2 +     89929 A-A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34252 2 +     51399 A-A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290471 2 -  14605196 a-a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 2
s Pipistrellus_pipistrellus.PipPip_scaffold_7723             79153 2 +     79650 A-A
i Pipistrellus_pipistrellus.PipPip_scaffold_7723         C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           33962 2 +     35617 A-A
i Platanista_gangetica.PlaMin_flattened_line_32310       I 9 C 0
s Pongo_abelii.CM009266.2                                189125012 2 + 189387572 a-a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9564855 2 +   9816681 A-A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               67748 2 -     81375 A-A
i Presbytis_comata.k141_677006                           C 0 I 4
s Presbytis_mitrata.k141_2342859                              9572 2 +     10147 A-A
i Presbytis_mitrata.k141_2342859                         C 0 I 7
s Propithecus_coquerelli.NW_012148875.1                     985805 2 +   2598838 g-a
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          24093 2 +     38485 G-A
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                              255 2 +      4256 G-A
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          21613 2 +     35766 G-A
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1630595                          16892 2 +     17239 G-A
i Propithecus_perrieri.k141_1630595                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        23607 2 -     67325 G-A
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_1019028                         13323 2 -     13615 G-A
i Propithecus_verreauxi.k141_1019028                     C 0 C 0
s Pteronotus_parnellii.KE909381.1                            10981 2 -     21811 a-a
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36453 1 +     42204 A--
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973470 2 +  28871421 a-a
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1406 2 -      8028 a-a
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20262882 2 -  38429054 t-a
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                              9578 2 -     91421 A-A
i Pygathrix_cinerea.k141_1153803                         C 0 I 3
s Pygathrix_nigripes_b.ctg100                                 7603712 2 +   7812017 A-A
i Pygathrix_nigripes_b.ctg100                               C 0 I 4
s Pygathrix_nigripes_a.k141_215492                              9550 2 -     72585 A-A
i Pygathrix_nigripes_a.k141_215492                         C 0 I 4
s Rhinolophus_sinicus.LVEH01000134.1                        366695 2 -   3329780 a-a
i Rhinolophus_sinicus.LVEH01000134.1                     I 5 C 0
s Rhinopithecus_bieti.k119_217274                              964 1 -     11128 A--
i Rhinopithecus_bieti.k119_217274                        C 0 I 4
s Rhinopithecus_roxellana.NC_044550.1                     91230342 1 - 195417433 a--
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 3
s Rhinopithecus_strykeri.ctg102                            7666050 1 +   7961872 A--
i Rhinopithecus_strykeri.ctg102                          C 0 I 3
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84453 2 -     96226 A-A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 1
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151163 2 -    313613 A-A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          14092 2 -     19888 A-A
i Semnopithecus_entellus.k141_11662                      C 0 I 4
s Semnopithecus_hypoleucos.k141_1615806                      21298 2 +     39453 A-A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 I 3
s Semnopithecus_johnii.k141_670120                            1822 2 +     27826 A-A
i Semnopithecus_johnii.k141_670120                       C 0 I 3
s Semnopithecus_priam.k141_638794                             1342 2 -     19483 A-A
i Semnopithecus_priam.k141_638794                        C 0 I 5
s Semnopithecus_schistaceus.k141_1584426                      1406 2 +      7198 A-A
i Semnopithecus_schistaceus.k141_1584426                 C 0 I 3
s Semnopithecus_vetulus.k141_1200928                          9664 2 +     15514 A-A
i Semnopithecus_vetulus.k141_1200928                     C 0 I 5
s Solenodon_paradoxus.SolPar_flattened_line_5840            187472 2 -    191337 A-A
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13646839 1 -  18376816 A--
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1947998 2 -   3870691 a-a
i Spermophilus_dauricus.KZ294078.1                       C 0 I 1
s Spilogale_gracilis.SpiGra_flattened_line_13525             26995 2 +     97271 A-A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629               6949 2 -    196729 A-A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   62882250 2 -  69701581 a-a
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1087645 2 -   1523678 A-A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6599 2 +     41958 T-T
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69225 3 +    116680 AAA
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 15 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      114974 2 -    156842 A-A
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383426 2 +    539355 A-A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10410 2 +     70052 A-A
i Tarsius_lariang.k141_2201908                           I 7 C 0
s Tarsius_wallacei.k141_780063                               14715 2 +     25099 A-A
i Tarsius_wallacei.k141_780063                           I 7 C 0
s Theropithecus_gelada.CM009954.1                        186422673 2 + 186847797 a-a
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              102980 2 +    114563 A-C
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 180 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   1633 1 +      8208 --A
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78743 2 +    610378 A-A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          5400 2 -     20410 A-A
i Trachypithecus_auratus.k141_722599                     C 0 I 6
s Trachypithecus_crepusculus.k141_1194022                     9594 2 +     15221 A-A
i Trachypithecus_crepusculus.k141_1194022                C 0 I 4
s Trachypithecus_cristatus.k141_580354                        5500 2 +     19930 A-A
i Trachypithecus_cristatus.k141_580354                   C 0 I 6
s Trachypithecus_francoisi.k141_1412647                       1928 2 -     19997 A-A
i Trachypithecus_francoisi.k141_1412647                  C 0 I 5
s Trachypithecus_geei.k141_277701                            42047 2 -     60166 A-A
i Trachypithecus_geei.k141_277701                        C 0 I 5
s Trachypithecus_germaini.k141_912491                         9521 2 -     27529 A-A
i Trachypithecus_germaini.k141_912491                    C 0 I 3
s Trachypithecus_hatinhensis.k141_143409                      9457 2 -     18194 A-A
i Trachypithecus_hatinhensis.k141_143409                 C 0 I 7
s Trachypithecus_laotum.k141_907409                           3196 2 -     21137 A-A
i Trachypithecus_laotum.k141_907409                      C 0 I 4
s Trachypithecus_leucocephalus.k141_587342                    1896 2 -     10723 A-A
i Trachypithecus_leucocephalus.k141_587342               C 0 I 6
s Trachypithecus_melamera.k141_434728                         1052 2 +      9834 A-A
i Trachypithecus_melamera.k141_434728                    C 0 I 4
s Trachypithecus_obscurus.k141_190785                        19366 2 +     32220 A-A
i Trachypithecus_obscurus.k141_190785                    C 0 I 4
s Trachypithecus_phayrei.ctg124                            5933464 2 +   6242583 A-A
i Trachypithecus_phayrei.ctg124                          C 0 I 6
s Trachypithecus_pileatus.k141_2007326                        2710 2 +     20839 A-A
i Trachypithecus_pileatus.k141_2007326                   C 0 I 5
s Tragulus_javanicus.TraJav_scaffold_140459                    248 2 -      1748 A-A
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 C 0
s Tupaia_chinensis.KB320699.1                              2149358 2 +   4065304 t-a
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     2977 2 -     10553 T-A
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737456 2 +  33153633 a-a
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_97021                    1687 2 -      4736 A-T
i Uropsilus_gracilis.UroGra_scaffold_97021               n 9 C 0
s Ursus_maritimus.KK499267.1                               4846693 2 -   5085361 a-a
i Ursus_maritimus.KK499267.1                             C 0 I 1
s Vicugna_pacos.KN270157.1                                 5368157 2 -   5488506 a-a
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7171 2 -     43706 a-a
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19493 2 -     24430 A-A
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1619 2 +      2932 A-A
i Zalophus_californianus.ZalCal_flattened_line_63728     I 7 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9778 2 +     63895 T-T
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11148 2 +     12536 A-A
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Varecia_variegata.k141_1128296                              7155 0 +     24756 C
e Varecia_rubra.k141_590885                                   7107 0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Saiga_tatarica.SaiTat_scaffold_373180                       3225 222 +      4321 I
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4576 218 +     55207 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414 0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                  9745 0 -     22811 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1264036 222 -   2937107 I
e Ovis_canadensis.OviCan_scaffold_2572                      173103 222 -    191736 I
e Ovis_aries.CM001607.2                                   17584682 222 +  44047080 I
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144328 218 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1355292 2 +   3988456 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Moschus_moschiferus.MosMos_scaffold_61429                  27091 222 -     27816 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lemur_catta.scaffold_24                                 15519761 0 -  30322482 C
e Heterohyrax_brucei.HetBruBak_scaffold_173205                3142 0 -      3357 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17151 222 +     36099 I
e Hapalemur_occidentalis.k141_907772                          9234 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402 0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298 0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517 0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galagoides_demidoff.k141_31856                              2985 0 -      3432 C
e Eulemur_sanfordi.k141_1122526                               9432 0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267 0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247 0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321 0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369 0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369 0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184 0 -     25546 C
e Eulemur_collaris.k141_377015                                2154 0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453 0 -     14127 C
e Erinaceus_europaeus.JH835339.1                           3320548 4609 -   7059049 I
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       309953 220 +    607251 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Catagonus_wagneri.CatWag_scaffold_2839                     88998 0 +    217609 C
e Capra_hircus.CM004588.1                                 18059667 222 -  44709034 I
e Capra_aegagrus.CM003241.1                               18828947 222 +  46296322 I
e Bubalus_bubalis.KI419123.1                               2818124 220 +   4408762 I
e Bos_taurus.CM000203.6                                   18082634 220 +  45695690 I
e Bos_mutus.JH880303.1                                     1124552 224 -   1948126 I
e Bos_indicus.CM003047.1                                  20271996 220 +  48749331 I
e Bison_bison.KN261452.1                                    198791 220 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    25751 222 +     34529 I
e Antilocapra_americana.AntAmePen_scaffold_12469             97280 223 -    100397 I
e Ammotragus_lervia.NIVO01071767.1                          674829 222 -   2318259 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                        617 2 +     62944 A-A
s Acinonyx_jubatus.LLWD01001279.1                           816735 1 -   1699592 --a
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506695 1 -  29979442 --a
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             74986 1 -    347723 --a
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64778 1 -     89534 --A
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9090 2 -     52922 A-A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9015 2 -     28001 A-A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9141 2 -      9772 A-A
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            298 2 -     12518 A-A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      182888 1 +    412891 --A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7024 2 +     20879 A-A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14233 2 +     17124 a-t
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2240 1 +     43469 --A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  49077 2 -     92717 A-A
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              49702 2 +     85213 A-A
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191314 1 +  23207421 --a
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         1780 1 -     18090 --a
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998670 1 -  17673402 --a
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331134 1 -   7040546 --a
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399410 1 -   1652518 --a
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795549 1 -  60362399 --A
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181606 1 -    185531 --A
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9030993 1 -   9314153 --a
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955257 1 -  59632846 --a
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496561 1 +  63665305 --a
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                     711 2 -     12242 A-A
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           140796 2 -    496798 a-a
i Carlito_syrichta.NW_007259797.1                        C 0 I 1
s Carollia_perspicillata.CarPer_scaffold_92756                2658 1 -     11696 --A
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133424 2 +    179628 A-A
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18347247 2 -  23392119 a-a
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18359507 2 -  23407841 a-a
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98382 2 +    143979 A-A
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         4713 2 -      8605 A-A
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227644 1 +  27778364 --a
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2362 1 -      3715 --A
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470059 2 +   4669795 a-a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8608 2 -     19203 A-A
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3027 2 +      8260 A-A
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3257 2 +     27781 A-A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3403 2 -     20310 A-A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6387 2 +     29689 A-A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             740 2 +      9989 A-A
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9075 2 -     27936 A-A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9094 2 -     11289 A-A
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811470 2 +  39242232 A-A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217161 2 -  21565898 A-A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34281 2 -     53127 A-A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1573 2 +      7159 A-A
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9086 2 -     27947 A-A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9062 2 +     17596 A-A
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39556 2 -     41420 A-A
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4578 2 -      6351 A-A
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16492 2 -     52598 A-A
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           11841 2 +     57038 A-A
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1248277 2 +   2543920 a-a
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18423025 2 -  18827391 A-A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9468 2 -     50209 A-A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416473 2 + 135778131 a-a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 14904 2 +     19366 A-A
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            169999 2 +    839153 a-a
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_172426               9013 2 -     10935 A-A
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          C 0 C 0
s Colobus_angolensis.KN981557.1                            1904993 2 +   2368649 a-a
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944611 2 + 200372422 A-A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31505 2 +     84244 A-A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545753 1 -  53390261 --a
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10275 1 -     20389 --A
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_109268              7359 1 +      9948 --A
i Crocidura_indochinensis.CroInd_scaffold_109268         n 1 I 56
s Cryptoprocta_ferox.CryFer_flattened_line_16129             17753 1 -     87169 --A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35413 1 +     51376 --A
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2623 2 +      5455 A-A
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1014 2 +      3576 A-A
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            60824 2 +   2246927 a-a
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532672 2 -  12879189 A-A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16810950 1 +  35494412 --a
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8627689 1 +  20541912 --a
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669177 1 +   1390856 --a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2252 1 +    198055 --A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34073 2 +     67921 A-A
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18895583 2 +  37912305 G-A
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  11793 2 +     14536 G-A
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31268 2 -     42551 A-A
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE759718.1                                   7199 1 +     11740 --a
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1088777 2 +  10337057 a-a
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16325548 1 -  41312741 --a
i Enhydra_lutris.KZ291758.1                              I 1 C 0
s Eptesicus_fuscus.JH977646.1                              2143540 1 -  14770903 --A
i Eptesicus_fuscus.JH977646.1                            C 0 I 1
s Equus_asinus.JREZ01000139.1                              1279519 1 +   4378816 --a
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527340 1 -  39960074 --a
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29355 1 +    498745 --a
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21199704 2 -  21539334 A-A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10626 1 +    133382 --A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24564 1 -     44125 --A
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.KN305074.1                                       399 1 -      2052 --a
i Felis_catus.KN305074.1                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20185165 1 + 205367284 --a
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_125938                10279 1 -     11347 --A
i Felis_nigripes.FelNig_flattened_line_125938            C 0 C 0
s Fukomys_damarensis.KN121974.1                             848291 3 +   3816255 aaa
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25221 2 +     26054 A-A
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30132 2 +     49224 A-A
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_2022027                               1265 2 +      3305 A-A
i Gorilla_beringei.k141_2022027                          C 0 C 0
s Gorilla_gorilla.CYUI03002401.1                              5488 2 +      7071 a-a
i Gorilla_gorilla.CYUI03002401.1                         C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   29860 2 +     78134 A-A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               230924 1 +    327341 --A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20659172 1 +  22651954 --a
i Heterocephalus_glaber.JH602082.1                       I 1 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111806 1 +    128679 --A
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108150 1 +   1711038 --a
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39589 1 +     43066 --A
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    429042 2 +    630532 A-A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  33034 1 +     55795 --A
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19626 2 -    143317 A-A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_307679                               11960 2 -     15490 A-A
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              53965 2 +     67168 A-A
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189537412 2 - 191637585 A-A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3330510 2 -  11177569 A-A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80715 2 +    135385 A-A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514358 2 -   7955117 a-a
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   17934 2 +     31101 A-A
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22167 1 +     23964 --A
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271145 1 -   9596543 --a
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1434 1 -      3359 --A
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    11679 1 -     42476 --A
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 1
s Lepilemur_ankaranensis.k141_596936                          6566 2 -     23766 A-A
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24513 2 +     45836 A-A
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31423 2 -     32627 A-A
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      22571 2 +     54090 A-A
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3035881 1 +   3914936 --a
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     3366 2 -     14121 A-A
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             267248 1 -    662738 --a
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1431226 2 +   1826925 A-A
i Lophocebus_aterrimus.ctg367                            C 0 I 2
s Loris_lydekkerianus.k141_2539221                             485 2 +     11245 a-c
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999320 2 +   6120653 a-c
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214263 2 -  43346337 t-a
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951497 1 -  59628241 --a
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               1414 2 +     40492 A-A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670674 2 +  60120075 A-A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7172 2 -     26193 A-A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            74962 2 -    114318 A-A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   685 2 -     23192 A-A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10134 2 -     29190 A-A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18705 2 +     37952 A-A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833793 2 + 187317192 a-a
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452351 2 -  25927173 a-a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74554 2 +     89720 A-A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1551 2 +     20474 A-A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1352 2 -     14993 A-A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  323984 2 -    668171 A-A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15494 2 -     15935 A-A
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20290 2 -     45290 A-A
i Macaca_tonkeana.k141_1498238                           C 0 I 1
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87342 1 +     94391 --A
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23931844 2 -  24302211 A-A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346024 2 +    752769 A-A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15385 1 +    737560 --a
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              46774 1 -    317179 --a
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097211 2 -  40650429 a-a
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6596 1 -    207569 --A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6013 1 +     13704 --A
i Mellivora_capensis.MelCap_flattened_line_69365         I 1 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    2835 1 +     10310 --A
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18283092 2 -  93316391 a-a
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    15239 2 -    145209 A-A
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13200 1 -     19307 --A
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1848631 1 +   8254450 --a
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32500 1 +     64694 --A
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3581 2 -     28506 A-A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62211 1 -     63350 --A
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      4453 2 -     37649 A-A
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26340 1 -    437263 --A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137604 1 -    366855 --A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   24115 1 +     37127 --A
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 1
s Murina_feae.MurFea_scaffold_85699                           4689 1 +     14753 --A
i Murina_feae.MurFea_scaffold_85699                      C 0 I 1
s Muscardinus_avellanarius.MusAve_scaffold_82313              2127 2 +     14296 A-A
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               297435 1 -  14710649 --A
i Mustela_putorius.JH418006.1                            I 1 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     70898 2 -     80779 A-A
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                277797 1 -  10118263 --A
i Myotis_brandtii.KE162005.1                             C 0 I 1
s Myotis_davidii.KB100139.1                                1585368 1 -   6019432 --A
i Myotis_davidii.KB100139.1                              C 0 I 1
s Myotis_lucifugus.GL429869.1                              3901585 1 -   4330536 --A
i Myotis_lucifugus.GL429869.1                            C 0 I 1
s Myotis_myotis.MyoMyo_scaffold_28916                        32134 1 +     33610 --A
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 I 1
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              185864 2 +    196477 A-A
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025293 1 -   3037898 --a
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                                9594 2 +     21681 A-A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865296 1 +   7148211 --a
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756164 1 +    783361 --A
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145758 1 -   9404916 --a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102574288 2 - 196305487 A-C
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             1974 2 +      8486 A-C
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744716 2 + 199412804 a-c
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                              500500 1 -   2017862 --a
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Orcinus_orca.KB316932.1                                  2781211 1 -  10937097 --a
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6601 2 -     18566 A-A
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67144208 2 + 174332312 a-a
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458512 1 -    559221 --a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Pan_paniscus.KQ411613.1                                    35978 2 +     80009 a-a
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189136928 2 + 189151597 a-a
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  140375 1 +    230217 --A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                251904 1 +  18783137 --a
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4710349 1 -   8748460 --a
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183437166 2 + 183742232 a-a
i Papio_anubis.CM001495.2                                C 0 I 2
s Papio_cynocephalus.k141_4307930                             1228 2 +     20448 A-A
i Papio_cynocephalus.k141_4307930                        C 0 I 2
s Papio_hamadryas.Contig39                                20557850 2 +  20919399 A-A
i Papio_hamadryas.Contig39                               C 0 I 2
s Papio_kindae.k141_4051466                                   1428 2 -      1598 A-A
i Papio_kindae.k141_4051466                              C 0 I 2
s Papio_papio.k141_802527                                     3260 2 +     27711 A-A
i Papio_papio.k141_802527                                C 0 I 2
s Papio_ursinus.k141_3428135                                  3249 2 +      9205 A-A
i Papio_ursinus.k141_3428135                             C 0 I 2
s Perodicticus_ibeanus.k141_855320                            4466 2 +     13100 a-t
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             2834 2 +     25941 A-T
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25141 2 +     32600 G-A
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25642 3 -     29689 AAA
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8258 1 +     63832 --A
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38111 2 +     62158 A-A
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        32838 2 +     89929 A-A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34254 2 +     51399 A-A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290475 2 -  14605196 a-a
i Piliocolobus_tephrosceles.PDMG02000141.1               I 2 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_7723             79155 1 +     79650 --A
i Pipistrellus_pipistrellus.PipPip_scaffold_7723         C 0 I 1
s Platanista_gangetica.PlaMin_flattened_line_32310           33964 1 +     35617 --A
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189125014 2 + 189387572 a-a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9564857 2 +   9816681 A-A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               67754 2 -     81375 A-A
i Presbytis_comata.k141_677006                           I 4 C 0
s Presbytis_mitrata.k141_2342859                              9581 2 +     10147 A-A
i Presbytis_mitrata.k141_2342859                         I 7 C 0
s Propithecus_coquerelli.NW_012148875.1                     985807 2 +   2598838 a-a
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          24095 2 +     38485 A-A
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                              257 2 +      4256 A-A
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          21615 2 +     35766 A-A
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1630595                          16894 2 +     17239 A-A
i Propithecus_perrieri.k141_1630595                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        23609 2 -     67325 A-A
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_1019028                         13325 2 -     13615 A-A
i Propithecus_verreauxi.k141_1019028                     C 0 C 0
s Pteronotus_parnellii.KE909381.1                            10983 1 -     21811 --a
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36454 1 +     42204 --A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973472 1 +  28871421 --a
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1408 1 -      8028 --a
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20262884 1 -  38429054 --a
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                              9583 2 -     91421 A-A
i Pygathrix_cinerea.k141_1153803                         I 3 C 0
s Pygathrix_nigripes_b.ctg100                                 7603718 2 +   7812017 A-A
i Pygathrix_nigripes_b.ctg100                               I 4 C 0
s Pygathrix_nigripes_a.k141_215492                              9556 2 -     72585 A-A
i Pygathrix_nigripes_a.k141_215492                         I 4 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        366697 1 -   3329780 --a
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                              969 2 -     11128 A-A
i Rhinopithecus_bieti.k119_217274                        I 4 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230346 2 - 195417433 a-a
i Rhinopithecus_roxellana.NC_044550.1                    I 3 C 0
s Rhinopithecus_strykeri.ctg102                            7666054 2 +   7961872 A-A
i Rhinopithecus_strykeri.ctg102                          I 3 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84456 1 -     96226 --A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 1 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151165 1 -    313613 --A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          14098 2 -     19888 A-A
i Semnopithecus_entellus.k141_11662                      I 4 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21303 2 +     39453 A-A
i Semnopithecus_hypoleucos.k141_1615806                  I 3 C 0
s Semnopithecus_johnii.k141_670120                            1827 2 +     27826 A-A
i Semnopithecus_johnii.k141_670120                       I 3 C 0
s Semnopithecus_priam.k141_638794                             1349 2 -     19483 A-A
i Semnopithecus_priam.k141_638794                        I 5 C 0
s Semnopithecus_schistaceus.k141_1584426                      1411 2 +      7198 A-A
i Semnopithecus_schistaceus.k141_1584426                 I 3 C 0
s Semnopithecus_vetulus.k141_1200928                          9671 2 +     15514 A-A
i Semnopithecus_vetulus.k141_1200928                     I 5 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187474 1 -    191337 --A
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13646840 1 -  18376816 --A
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1948001 2 -   3870691 a-a
i Spermophilus_dauricus.KZ294078.1                       I 1 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             26997 1 +     97271 --A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629               6951 1 -    196729 --A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   62882252 1 -  69701581 --a
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1087647 2 -   1523678 A-A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6601 1 +     41958 --A
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69228 2 +    116680 A-A
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      114976 1 -    156842 --A
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383428 1 +    539355 --A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10412 2 +     70052 A-A
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               14717 2 +     25099 A-A
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422675 2 + 186847797 a-a
i Theropithecus_gelada.CM009954.1                        C 0 I 2
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              102982 3 +    114563 AAA
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   1634 2 +      8208 A-A
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78745 1 +    610378 --A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          5408 2 -     20410 A-A
i Trachypithecus_auratus.k141_722599                     I 6 C 0
s Trachypithecus_crepusculus.k141_1194022                     9600 2 +     15221 A-A
i Trachypithecus_crepusculus.k141_1194022                I 4 C 0
s Trachypithecus_cristatus.k141_580354                        5508 2 +     19930 A-A
i Trachypithecus_cristatus.k141_580354                   I 6 C 0
s Trachypithecus_francoisi.k141_1412647                       1935 2 -     19997 A-A
i Trachypithecus_francoisi.k141_1412647                  I 5 C 0
s Trachypithecus_geei.k141_277701                            42054 2 -     60166 A-A
i Trachypithecus_geei.k141_277701                        I 5 C 0
s Trachypithecus_germaini.k141_912491                         9526 2 -     27529 A-A
i Trachypithecus_germaini.k141_912491                    I 3 C 0
s Trachypithecus_hatinhensis.k141_143409                      9466 2 -     18194 A-A
i Trachypithecus_hatinhensis.k141_143409                 I 7 C 0
s Trachypithecus_laotum.k141_907409                           3202 2 -     21137 A-A
i Trachypithecus_laotum.k141_907409                      I 4 C 0
s Trachypithecus_leucocephalus.k141_587342                    1904 2 -     10723 A-A
i Trachypithecus_leucocephalus.k141_587342               I 6 C 0
s Trachypithecus_melamera.k141_434728                         1058 2 +      9834 A-A
i Trachypithecus_melamera.k141_434728                    I 4 C 0
s Trachypithecus_obscurus.k141_190785                        19372 2 +     32220 A-A
i Trachypithecus_obscurus.k141_190785                    I 4 C 0
s Trachypithecus_phayrei.ctg124                            5933472 2 +   6242583 A-A
i Trachypithecus_phayrei.ctg124                          I 6 C 0
s Trachypithecus_pileatus.k141_2007326                        2717 2 +     20839 A-A
i Trachypithecus_pileatus.k141_2007326                   I 5 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    250 1 -      1748 --A
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 I 3
s Tupaia_chinensis.KB320699.1                              2149360 2 +   4065304 a-t
i Tupaia_chinensis.KB320699.1                            C 0 I 3
s Tupaia_tana.TupTan_flattened_line_97126                     2979 2 -     10553 G-T
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 3
s Tursiops_truncatus.MRVK01000835.1                       15737458 1 +  33153633 --a
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_97021                    1689 1 -      4736 --A
i Uropsilus_gracilis.UroGra_scaffold_97021               C 0 C 0
s Ursus_maritimus.KK499267.1                               4846696 1 -   5085361 --a
i Ursus_maritimus.KK499267.1                             I 1 C 0
s Vicugna_pacos.KN270157.1                                 5368159 1 -   5488506 --a
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7173 1 -     43706 --a
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19495 2 -     24430 A-A
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1621 1 +      2932 --A
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9780 1 +     63895 --T
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11150 1 +     12536 --A
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Varecia_variegata.k141_1128296                              7155 0 +     24756 C
e Varecia_rubra.k141_590885                                   7107 0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Saiga_tatarica.SaiTat_scaffold_373180                       3225 222 +      4321 I
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4576 218 +     55207 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414 0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                  9745 0 -     22811 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      1174 0 -     78924 C
e Pantholops_hodgsonii.KE114653.1                          1264036 222 -   2937107 I
e Ovis_canadensis.OviCan_scaffold_2572                      173103 222 -    191736 I
e Ovis_aries.CM001607.2                                   17584682 222 +  44047080 I
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144328 218 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1355292 2 +   3988456 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Moschus_moschiferus.MosMos_scaffold_61429                  27091 222 -     27816 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lemur_catta.scaffold_24                                 15519761 0 -  30322482 C
e Heterohyrax_brucei.HetBruBak_scaffold_173205                3142 0 -      3357 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17151 222 +     36099 I
e Hapalemur_occidentalis.k141_907772                          9234 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402 0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298 0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517 0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galagoides_demidoff.k141_31856                              2985 0 -      3432 C
e Eulemur_sanfordi.k141_1122526                               9432 0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267 0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247 0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321 0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369 0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369 0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184 0 -     25546 C
e Eulemur_collaris.k141_377015                                2154 0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453 0 -     14127 C
e Erinaceus_europaeus.JH835339.1                           3320548 4609 -   7059049 I
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       309953 220 +    607251 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Catagonus_wagneri.CatWag_scaffold_2839                     88998 0 +    217609 C
e Capra_hircus.CM004588.1                                 18059667 222 -  44709034 I
e Capra_aegagrus.CM003241.1                               18828947 222 +  46296322 I
e Bubalus_bubalis.KI419123.1                               2818124 220 +   4408762 I
e Bos_taurus.CM000203.6                                   18082634 220 +  45695690 I
e Bos_mutus.JH880303.1                                     1124552 224 -   1948126 I
e Bos_indicus.CM003047.1                                  20271996 220 +  48749331 I
e Bison_bison.KN261452.1                                    198791 220 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    25751 222 +     34529 I
e Antilocapra_americana.AntAmePen_scaffold_12469             97280 223 -    100397 I
e Ammotragus_lervia.NIVO01071767.1                          674829 222 -   2318259 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                        619 1 +     62944 A
s Gorilla_beringei.k141_2022027                               1267 1 +      3305 A
i Gorilla_beringei.k141_2022027                          C 0 I 1
s Gorilla_gorilla.CYUI03002401.1                              5490 1 +      7071 a
i Gorilla_gorilla.CYUI03002401.1                         C 0 I 1
s Pan_paniscus.KQ411613.1                                    35980 1 +     80009 a
i Pan_paniscus.KQ411613.1                                C 0 I 1
s Pan_troglodytes.CM009242.2                             189136930 1 + 189151597 a
i Pan_troglodytes.CM009242.2                             C 0 N 0
s Pongo_abelii.CM009266.2                                189125016 1 + 189387572 a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9564859 1 +   9816681 A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9015 0 -     10935 C
e Loris_tardigradus.ctg83                                   999322 0 +   6120653 C
e Loris_lydekkerianus.k141_2539221                             487 0 +     11245 C
e Perodicticus_potto.k141_1092580                             2836 0 +     25941 C
e Perodicticus_ibeanus.k141_855320                            4468 0 +     13100 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            11151 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                       9781 0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_63728          1622 0 +      2932 C
e Xerus_inauris.XerIna_scaffold_48378                        19497 0 -     24430 C
e Vulpes_lagopus.VulLag_flattened_line_30954                  7174 0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5368160 0 -   5488506 C
e Varecia_variegata.k141_1128296                              7155 0 +     24756 C
e Varecia_rubra.k141_590885                                   7107 0 +     50397 C
e Ursus_maritimus.KK499267.1                               4846697 0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_97021                    1690 0 -      4736 C
e Tursiops_truncatus.MRVK01000835.1                       15737459 0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     2981 3 -     10553 I
e Tupaia_chinensis.KB320699.1                              2149362 3 +   4065304 I
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                    251 3 -      1748 I
e Trachypithecus_pileatus.k141_2007326                        2719 0 +     20839 C
e Trachypithecus_phayrei.ctg124                            5933474 0 +   6242583 C
e Trachypithecus_obscurus.k141_190785                        19374 0 +     32220 C
e Trachypithecus_melamera.k141_434728                         1060 0 +      9834 C
e Trachypithecus_leucocephalus.k141_587342                    1906 0 -     10723 C
e Trachypithecus_laotum.k141_907409                           3204 0 -     21137 C
e Trachypithecus_hatinhensis.k141_143409                      9468 0 -     18194 C
e Trachypithecus_germaini.k141_912491                         9528 0 -     27529 C
e Trachypithecus_geei.k141_277701                            42056 0 -     60166 C
e Trachypithecus_francoisi.k141_1412647                       1937 0 -     19997 C
e Trachypithecus_cristatus.k141_580354                        5510 0 +     19930 C
e Trachypithecus_crepusculus.k141_1194022                     9602 0 +     15221 C
e Trachypithecus_auratus.k141_722599                          5410 0 -     20410 C
e Tonatia_saurophila.TonSau_scaffold_294                     78746 0 +    610378 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   1636 0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              102985 0 +    114563 C
e Theropithecus_gelada.CM009954.1                        186422677 2 + 186847797 I
e Tarsius_wallacei.k141_780063                               14719 0 +     25099 C
e Tarsius_lariang.k141_2201908                               10414 0 +     70052 C
e Tapirus_terrestris.TapTer_scaffold_755                    383429 0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      114977 0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 69230 0 +    116680 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                 6602 0 +     41958 C
e Symphalangus_syndactylus.tarseq_199                      1087649 0 -   1523678 C
e Sus_scrofa.CM000828.4                                   62882253 0 -  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629               6952 0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             26998 0 +     97271 C
e Spermophilus_dauricus.KZ294078.1                         1948003 0 -   3870691 C
e Sorex_araneus.JH798187.1                                13646841 0 -  18376816 C
e Solenodon_paradoxus.SolPar_flattened_line_5840            187475 0 -    191337 C
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Semnopithecus_vetulus.k141_1200928                          9673 0 +     15514 C
e Semnopithecus_schistaceus.k141_1584426                      1413 0 +      7198 C
e Semnopithecus_priam.k141_638794                             1351 0 -     19483 C
e Semnopithecus_johnii.k141_670120                            1829 0 +     27826 C
e Semnopithecus_hypoleucos.k141_1615806                      21305 0 +     39453 C
e Semnopithecus_entellus.k141_11662                          14100 0 -     19888 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    151166 0 -    313613 C
e Saiga_tatarica.SaiTat_scaffold_373180                       3225 222 +      4321 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                84457 0 -     96226 C
e Rhinopithecus_strykeri.ctg102                            7666056 0 +   7961872 C
e Rhinopithecus_roxellana.NC_044550.1                     91230348 0 - 195417433 C
e Rhinopithecus_bieti.k119_217274                              971 0 -     11128 C
e Rhinolophus_sinicus.LVEH01000134.1                        366698 0 -   3329780 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4576 218 +     55207 I
e Pygathrix_nigripes_a.k141_215492                              9558 0 -     72585 C
e Pygathrix_nigripes_b.ctg100                                 7603720 0 +   7812017 C
e Pygathrix_cinerea.k141_1153803                              9585 0 -     91421 C
e Puma_concolor.QAVW01001104.1                            20262885 0 -  38429054 C
e Pteropus_vampyrus.KN534172.1                                1409 0 -      8028 C
e Pteropus_alecto.KB030862.1                              22973473 0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         36455 0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            10984 0 -     21811 C
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Propithecus_verreauxi.k141_1019028                         13327 0 -     13615 C
e Propithecus_tattersalli.k141_790011                        23611 0 -     67325 C
e Propithecus_perrieri.k141_1630595                          16896 0 +     17239 C
e Propithecus_edwardsi.k141_1176054                          21617 0 +     35766 C
e Propithecus_diadema.k141_357118                              259 0 +      4256 C
e Propithecus_coronatus.k141_347390                          24097 0 +     38485 C
e Propithecus_coquerelli.NW_012148875.1                     985809 0 +   2598838 C
e Prolemur_simus.MPIZ01000396.1                            2592414 0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                  9745 0 -     22811 C
e Presbytis_mitrata.k141_2342859                              9583 0 +     10147 C
e Presbytis_comata.k141_677006                               67756 0 -     81375 C
e Platanista_gangetica.PlaMin_flattened_line_32310           33965 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_7723             79156 1 +     79650 I
e Piliocolobus_tephrosceles.PDMG02000141.1                14290477 0 -  14605196 C
e Piliocolobus_kirkii.k141_448987                            34256 0 +     51399 C
e Piliocolobus_gordonorum.k141_381342                        32840 0 +     89929 C
e Piliocolobus_badius.k141_1234363                           38113 0 +     62158 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               8259 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     25645 0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25143 0 +     32600 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      1174 0 -     78924 C
e Papio_ursinus.k141_3428135                                  3251 2 +      9205 I
e Papio_papio.k141_802527                                     3262 2 +     27711 I
e Papio_kindae.k141_4051466                                   1430 2 -      1598 I
e Papio_hamadryas.Contig39                                20557852 2 +  20919399 I
e Papio_cynocephalus.k141_4307930                             1230 2 +     20448 I
e Papio_anubis.CM001495.2                                183437168 2 + 183742232 I
e Pantholops_hodgsonii.KE114653.1                          1264036 222 -   2937107 I
e Panthera_tigris.KE722367.1                               4710350 0 -   8748460 C
e Panthera_pardus.KV860321.1                                251905 0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  140376 0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      173103 222 -    191736 I
e Ovis_aries.CM001607.2                                   17584682 222 +  44047080 I
e Otocyon_megalotis.JAEUCK010005147.1                       458513 0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                        67144210 0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               6603 0 -     18566 C
e Orcinus_orca.KB316932.1                                  2781212 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144328 218 +    630418 I
e Odobenus_rosmarus.KB229312.1                              500501 0 -   2017862 C
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1355292 2 +   3988456 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744718 0 + 199412804 C
e Nycticebus_coucang.k141_5327727                             1976 0 +      8486 C
e Nycticebus_bengalensis.LG01                            102574290 0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9145759 0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    756165 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5865297 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nasalis_larvatus.k141_413338                                9596 0 +     21681 C
e Nannospalax_galili.KL204047.1                            2025294 0 -   3037898 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              185866 0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        32135 1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3901586 1 -   4330536 I
e Myotis_davidii.KB100139.1                                1585369 1 -   6019432 I
e Myotis_brandtii.KE162005.1                                277798 1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70900 0 -     80779 C
e Mustela_putorius.JH418006.1                               297436 0 -  14710649 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              2129 0 +     14296 C
e Murina_feae.MurFea_scaffold_85699                           4690 1 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   24116 1 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_61429                  27091 222 -     27816 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 137605 0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    26341 0 -    437263 C
e Mirza_zaza.k141_952172                                      4455 0 -     37649 C
e Mirounga_angustirostris.MirAng_flattened_line_22144        62212 0 -     63350 C
e Miopithecus_ogouensis.k141_534055                           3583 0 -     28506 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             32501 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1848632 0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                13201 0 -     19307 C
e Microgale_talazaci.MicTal_scaffold_6613                    15241 0 -    145209 C
e Microcebus_murinus.CM007674.1                           18283094 0 -  93316391 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    2836 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365              6014 0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                         6597 0 -    207569 C
e Marmota_marmota.CZRN01000018.1                          33097213 0 -  40650429 C
e Manis_pentadactyla.KN006162.1                              46775 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              15386 0 +    737560 C
e Mandrillus_sphinx.Contig270                               346026 0 +    752769 C
e Mandrillus_leucophaeus.scaffold280                      23931846 0 -  24302211 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 87343 0 +     94391 C
e Macaca_tonkeana.k141_1498238                               20292 1 -     45290 I
e Macaca_thibetana.k99_7456                                  15496 0 -     15935 C
e Macaca_silenus.Contig273                                  323986 0 -    668171 C
e Macaca_siberu.k141_635500                                   1354 0 -     14993 C
e Macaca_radiata.k141_3680011                                 1553 0 +     20474 C
e Macaca_nigra.k141_1655396                                  74556 0 +     89720 C
e Macaca_nemestrina.KQ007038.1                            25452353 0 -  25927173 C
e Macaca_mulatta.NC_041758.1                             186833795 0 + 187317192 C
e Macaca_maura.k141_2733130                                  18707 0 +     37952 C
e Macaca_leonina.k141_3550399                                10136 0 -     29190 C
e Macaca_fuscata.k119_255327                                   687 0 -     23192 C
e Macaca_fascicularis.k141_814140                            74964 0 -    114318 C
e Macaca_cyclopis.k119_18836                                  7174 0 -     26193 C
e Macaca_assamensis.Contig5                               59670676 0 +  60120075 C
e Macaca_arctoides.k141_2326796                               1416 0 +     40492 C
e Lycaon_pictus.CM007581.1                                17951498 0 -  59628241 C
e Loxodonta_africana.GL010049.1                            4214265 0 -  43346337 C
e Lophocebus_aterrimus.ctg367                              1431228 2 +   1826925 I
e Lipotes_vexillifer.KE559953.1                             267249 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3368 0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3035882 0 +   3914936 C
e Lepilemur_septentrionalis.k141_185316                      22573 0 +     54090 C
e Lepilemur_ruficaudatus.k141_420445                         31425 0 -     32627 C
e Lepilemur_dorsalis.k141_577674                             24515 0 +     45836 C
e Lepilemur_ankaranensis.k141_596936                          6568 0 -     23766 C
e Lemur_catta.scaffold_24                                 15519761 0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    11680 1 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                1435 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8271146 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               22168 0 +     23964 C
e Indri_indri.k141_3655594                                   17936 0 +     31101 C
e Ictidomys_tridecemlineatus.JH393364.1                    7514360 0 -   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                      80717 0 +    135385 C
e Hylobates_pileatus_a.tarseq_633                            3330512 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189537414 0 - 191637585 C
e Hylobates_klossii.k141_282416                              53967 0 +     67168 C
e Hylobates_agilis.k141_307679                               11962 0 -     15490 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19628 0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  33035 0 +     55795 C
e Hoolock_leuconedys.ctg274                                    429044 0 +    630532 C
e Hipposideros_galeritus.HipGal_scaffold_29171               39590 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       108151 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               111807 0 +    128679 C
e Heterohyrax_brucei.HetBruBak_scaffold_173205                3142 0 -      3357 C
e Heterocephalus_glaber.JH602082.1                        20659173 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17151 222 +     36099 I
e Helogale_parvula.HelPar_flattened_line_2585               230925 0 +    327341 C
e Hapalemur_occidentalis.k141_907772                          9234 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402 0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298 0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517 0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   29862 0 +     78134 C
e Glis_glis.GliGli_scaffold_19807                            30134 0 +     49224 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_56069               25223 0 +     26054 C
e Galagoides_demidoff.k141_31856                              2985 0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848294 0 +   3816255 C
e Felis_nigripes.FelNig_flattened_line_125938                10280 0 -     11347 C
e Felis_catus_fca126.CM031415.1                           20185166 0 + 205367284 C
e Eulemur_sanfordi.k141_1122526                               9432 0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267 0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247 0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321 0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369 0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369 0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184 0 -     25546 C
e Eulemur_collaris.k141_377015                                2154 0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453 0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             24565 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           10627 0 +    133382 C
e Erythrocebus_patas.Contig38                             21199706 0 -  21539334 C
e Erinaceus_europaeus.JH835339.1                           3320548 4609 -   7059049 I
e Equus_przewalskii.KK951119.1                               29356 0 +    498745 C
e Equus_caballus.CM000403.2                               18527341 0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1279520 0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2143541 1 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16325549 0 -  41312741 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1088779 0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       309953 220 +    607251 I
e Eidolon_helvum.KE759718.1                                   7200 0 +     11740 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 31270 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  11795 0 +     14536 C
e Dipodomys_ordii.KN672350.1                              18895585 0 +  37912305 C
e Dinomys_branickii.DinBra_scaffold_21862                    34075 0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    2253 0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  669178 0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8627690 0 +  20541912 C
e Delphinapterus_leucas.KZ290073.1                        16810951 0 +  35494412 C
e Daubentonia_madagascariensis.ctg71                      12532674 0 -  12879189 C
e Dasypus_novemcinctus.JH564415.1                            60826 0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1016 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 2625 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35414 0 +     51376 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             17754 0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_109268              7360 56 +      9948 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          10276 0 -     20389 C
e Condylura_cristata.JH655891.1                           17545754 0 -  53390261 C
e Colobus_polykomos.k141_906115                              31507 0 +     84244 C
e Colobus_guereza.LG01                                   199944613 0 + 200372422 C
e Colobus_angolensis.KN981557.1                            1904995 0 +   2368649 C
e Choloepus_hoffmanni.KN194906.1                            170001 0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 14906 0 +     19366 C
e Chlorocebus_sabaeus.CM001947.1                         135416475 0 + 135778131 C
e Chlorocebus_pygerythrus.k141_1025673                        9470 0 -     50209 C
e Chlorocebus_aethiops.ctg25                              18423027 0 -  18827391 C
e Chinchilla_lanigera.JH722012.1                           1248279 0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           11843 0 +     57038 C
e Cheirogaleus_major.k141_333249                             16494 0 -     52598 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            4580 0 -      6351 C
e Cercopithecus_roloway.k141_3180641                         39558 0 -     41420 C
e Cercopithecus_pogonias.k141_822820                          9064 0 +     17596 C
e Cercopithecus_petaurista.k141_807961                        9088 0 -     27947 C
e Cercopithecus_nictitans.k141_3278028                        1575 0 +      7159 C
e Cercopithecus_neglectus.k141_2526306                       34283 0 -     53127 C
e Cercopithecus_mona.ctg39                                21217163 0 -  21565898 C
e Cercopithecus_albogularis.ctg5                                38811472 0 +  39242232 C
e Cercopithecus_lowei.k141_457449                             9096 0 -     11289 C
e Cercopithecus_hamlyni.k141_187466                           9077 0 -     27936 C
e Cercopithecus_diana.k141_2427854                             742 0 +      9989 C
e Cercopithecus_cephus.k141_1078548                           6389 0 +     29689 C
e Cercopithecus_ascanius.k141_1024104                         3405 0 -     20310 C
e Cercocebus_torquatus.k141_3057011                           3259 0 +     27781 C
e Cercocebus_lunulatus.k141_3846941                           3029 0 +      8260 C
e Cercocebus_chrysogaster.k141_393940                         8610 0 -     19203 C
e Cercocebus_atys.KQ010504.1                               4470061 0 +   4669795 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2363 0 -      3715 C
e Cephalopachus_bancanus.k141_2037105                         4715 0 -      8605 C
e Cavia_tschudii.CavTsc_scaffold_8919                        98384 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18359509 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18347249 0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     88998 0 +    217609 C
e Castor_canadensis.CasCan_scaffold_2074                    133426 0 +    179628 C
e Carollia_perspicillata.CarPer_scaffold_92756                2659 0 -     11696 C
e Carlito_syrichta.NW_007259797.1                           140798 1 -    496798 I
e Capromys_pilorides.CapPil_scaffold_65020                     713 0 -     12242 C
e Capra_hircus.CM004588.1                                 18059667 222 -  44709034 I
e Capra_aegagrus.CM003241.1                               18828947 222 +  46296322 I
e Canis_lupus_orion.HG994398.1                            18496562 0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17955258 0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9030994 0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    181607 0 -    185531 C
e CanFam4.chr16                                           17795550 0 -  60362399 C
e Camelus_ferus.KB017975.1                                  399411 0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2331135 0 -   7040546 C
e Camelus_bactrianus.KN276810.1                            9998671 0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2818124 220 +   4408762 I
e Bos_taurus.CM000203.6                                   18082634 220 +  45695690 I
e Bos_mutus.JH880303.1                                     1124552 224 -   1948126 I
e Bos_indicus.CM003047.1                                  20271996 220 +  48749331 I
e Bison_bison.KN261452.1                                    198791 220 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    25751 222 +     34529 I
e Balaenoptera_bonaerensis.DF707048.1                         1781 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15191315 0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              49704 0 +     85213 C
e Avahi_laniger.k141_765380                                  49079 0 -     92717 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  2241 0 +     43469 C
e Arctocebus_calabarensis.k141_288239                        14235 0 +     17124 C
e Aplodontia_rufa.AprRuf_scaffold_68852                       7026 0 +     20879 C
e Antilocapra_americana.AntAmePen_scaffold_12469             97280 223 -    100397 I
e Anoura_caudifer.AnoCau_scaffold_1412                      182889 0 +    412891 C
e Ammotragus_lervia.NIVO01071767.1                          674829 222 -   2318259 I
e Allochrocebus_solatus.k141_166128                            300 0 -     12518 C
e Allochrocebus_preussi.k141_310680                           9143 0 -      9772 C
e Allochrocebus_lhoesti.k141_4309873                          9017 0 -     28001 C
e Allenopithecus_nigroviridis.k141_3361533                    9092 0 -     52922 C
e Allactaga_bullata.AllBul_scaffold_9566                     64779 0 -     89534 C
e Ailurus_fulgens.LNAC01001112.1                             74987 0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9506696 0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           816736 0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                        620 3 +     62944 TC--A
s Acinonyx_jubatus.LLWD01001279.1                           816736 3 -   1699592 -a-aa
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 3
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506696 2 -  29979442 -a--a
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 3
s Ailurus_fulgens.LNAC01001112.1                             74987 2 -    347723 -a--a
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 3
s Allactaga_bullata.AllBul_scaffold_9566                     64779 2 -     89534 -A--A
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 3
s Allenopithecus_nigroviridis.k141_3361533                    9092 2 -     52922 -A--A
i Allenopithecus_nigroviridis.k141_3361533               C 0 I 4
s Allochrocebus_lhoesti.k141_4309873                          9017 2 -     28001 -A--A
i Allochrocebus_lhoesti.k141_4309873                     C 0 I 4
s Allochrocebus_preussi.k141_310680                           9143 2 -      9772 -A--A
i Allochrocebus_preussi.k141_310680                      C 0 I 4
s Allochrocebus_solatus.k141_166128                            300 2 -     12518 -A--A
i Allochrocebus_solatus.k141_166128                      C 0 I 4
s Anoura_caudifer.AnoCau_scaffold_1412                      182889 2 +    412891 -A--A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 3
s Aplodontia_rufa.AprRuf_scaffold_68852                       7026 2 +     20879 -A--T
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 38
s Arctocebus_calabarensis.k141_288239                        14235 3 +     17124 -a-aa
i Arctocebus_calabarensis.k141_288239                    C 0 I 4
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2241 2 +     43469 -A--A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 3
s Avahi_laniger.k141_765380                                  49079 3 -     92717 -AA-T
i Avahi_laniger.k141_765380                              C 0 I 4
s Avahi_peyrierasi.k141_1424874                              49704 3 +     85213 -AA-T
i Avahi_peyrierasi.k141_1424874                          C 0 I 4
s Balaenoptera_acutorostrata.KI537508.1                   15191315 2 +  23207421 -a--a
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 3
s Balaenoptera_bonaerensis.DF707048.1                         1781 2 -     18090 -a--a
i Balaenoptera_bonaerensis.DF707048.1                    C 0 I 3
s Camelus_bactrianus.KN276810.1                            9998671 2 -  17673402 -a--a
i Camelus_bactrianus.KN276810.1                          C 0 I 3
s Camelus_dromedarius.KN272107.1                           2331135 2 -   7040546 -a--a
i Camelus_dromedarius.KN272107.1                         C 0 I 3
s Camelus_ferus.KB017975.1                                  399411 2 -   1652518 -a--a
i Camelus_ferus.KB017975.1                               C 0 I 3
s CanFam4.chr16                                           17795550 3 -  60362399 -A-TA
i CanFam4.chr16                                          C 0 I 3
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181607 3 -    185531 -A-TA
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 I 3
s Canis_lupus_dingo.QKWQ01000480.1                         9030994 3 -   9314153 -a-ta
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 3
s Canis_lupus_familiaris.chr16                            17955258 3 -  59632846 -a-ta
i Canis_lupus_familiaris.chr16                           C 0 I 3
s Canis_lupus_orion.HG994398.1                            18496562 3 +  63665305 -a-ta
i Canis_lupus_orion.HG994398.1                           C 0 I 3
s Capromys_pilorides.CapPil_scaffold_65020                     713 2 -     12242 -A--T
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 3
s Carlito_syrichta.NW_007259797.1                           140799 2 -    496798 -a--a
i Carlito_syrichta.NW_007259797.1                        I 1 I 14
s Carollia_perspicillata.CarPer_scaffold_92756                2659 2 -     11696 -A--A
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 3
s Castor_canadensis.CasCan_scaffold_2074                    133426 4 +    179628 -GATT
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 1
s Cavia_aperea.AVPZ01000300.1                             18347249 2 -  23392119 -a--t
i Cavia_aperea.AVPZ01000300.1                            C 0 I 3
s Cavia_porcellus.DS562891.1                              18359509 2 -  23407841 -a--t
i Cavia_porcellus.DS562891.1                             C 0 I 3
s Cavia_tschudii.CavTsc_scaffold_8919                        98384 2 +    143979 -A--T
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 I 3
s Cephalopachus_bancanus.k141_2037105                         4715 2 -      8605 -A--A
i Cephalopachus_bancanus.k141_2037105                    C 0 I 14
s Ceratotherium_simum.JH767749.1                          12227645 2 +  27778364 -a--a
i Ceratotherium_simum.JH767749.1                         C 0 I 3
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2363 2 -      3715 -A--A
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 I 3
s Cercocebus_atys.KQ010504.1                               4470061 2 +   4669795 -a--a
i Cercocebus_atys.KQ010504.1                             C 0 I 4
s Cercocebus_chrysogaster.k141_393940                         8610 2 -     19203 -A--A
i Cercocebus_chrysogaster.k141_393940                    C 0 I 4
s Cercocebus_lunulatus.k141_3846941                           3029 2 +      8260 -A--A
i Cercocebus_lunulatus.k141_3846941                      C 0 I 4
s Cercocebus_torquatus.k141_3057011                           3259 2 +     27781 -A--A
i Cercocebus_torquatus.k141_3057011                      C 0 I 4
s Cercopithecus_ascanius.k141_1024104                         3405 2 -     20310 -A--A
i Cercopithecus_ascanius.k141_1024104                    C 0 I 4
s Cercopithecus_cephus.k141_1078548                           6389 2 +     29689 -A--A
i Cercopithecus_cephus.k141_1078548                      C 0 I 4
s Cercopithecus_diana.k141_2427854                             742 2 +      9989 -A--A
i Cercopithecus_diana.k141_2427854                       C 0 I 4
s Cercopithecus_hamlyni.k141_187466                           9077 2 -     27936 -A--A
i Cercopithecus_hamlyni.k141_187466                      C 0 I 4
s Cercopithecus_lowei.k141_457449                             9096 2 -     11289 -A--A
i Cercopithecus_lowei.k141_457449                        C 0 I 4
s Cercopithecus_albogularis.ctg5                                38811472 2 +  39242232 -A--A
i Cercopithecus_albogularis.ctg5                               C 0 I 4
s Cercopithecus_mona.ctg39                                21217163 2 -  21565898 -A--A
i Cercopithecus_mona.ctg39                               C 0 I 4
s Cercopithecus_neglectus.k141_2526306                       34283 2 -     53127 -A--A
i Cercopithecus_neglectus.k141_2526306                   C 0 I 4
s Cercopithecus_nictitans.k141_3278028                        1575 2 +      7159 -A--A
i Cercopithecus_nictitans.k141_3278028                   C 0 I 4
s Cercopithecus_petaurista.k141_807961                        9088 2 -     27947 -A--A
i Cercopithecus_petaurista.k141_807961                   C 0 I 4
s Cercopithecus_pogonias.k141_822820                          9064 2 +     17596 -A--A
i Cercopithecus_pogonias.k141_822820                     C 0 I 4
s Cercopithecus_roloway.k141_3180641                         39558 2 -     41420 -A--A
i Cercopithecus_roloway.k141_3180641                     C 0 I 4
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4580 2 -      6351 -A--A
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 I 3
s Cheirogaleus_major.k141_333249                             16494 3 -     52598 -TA-T
i Cheirogaleus_major.k141_333249                         C 0 I 4
s Cheirogaleus_medius.k141_1055463                           11843 3 +     57038 -TA-T
i Cheirogaleus_medius.k141_1055463                       C 0 I 4
s Chinchilla_lanigera.JH722012.1                           1248279 2 +   2543920 -a--t
i Chinchilla_lanigera.JH722012.1                         C 0 I 3
s Chlorocebus_aethiops.ctg25                              18423027 2 -  18827391 -A--A
i Chlorocebus_aethiops.ctg25                             C 0 I 4
s Chlorocebus_pygerythrus.k141_1025673                        9470 2 -     50209 -A--A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 I 4
s Chlorocebus_sabaeus.CM001947.1                         135416475 2 + 135778131 -a--a
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 4
s Choloepus_didactylus.ChoDid_scaffold_45914                 14906 2 +     19366 -C--A
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 I 3
s Choloepus_hoffmanni.KN194906.1                            170001 2 +    839153 -c--a
i Choloepus_hoffmanni.KN194906.1                         C 0 I 3
s Chrysochloris_asiatica.ChrAsi_scaffold_172426               9015 2 -     10935 -A--A
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          C 0 I 3
s Colobus_angolensis.KN981557.1                            1904995 2 +   2368649 -a--a
i Colobus_angolensis.KN981557.1                          C 0 I 4
s Colobus_guereza.LG01                                   199944613 2 + 200372422 -A--A
i Colobus_guereza.LG01                                   C 0 I 4
s Colobus_polykomos.k141_906115                              31507 2 +     84244 -A--A
i Colobus_polykomos.k141_906115                          C 0 I 4
s Condylura_cristata.JH655891.1                           17545754 2 -  53390261 -a--a
i Condylura_cristata.JH655891.1                          C 0 I 7
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10276 2 -     20389 -A--A
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 3
s Crocidura_indochinensis.CroInd_scaffold_287352               197 2 +      4208 -A--A
i Crocidura_indochinensis.CroInd_scaffold_287352         I 1 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_16129             17754 3 -     87169 -AA-A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 3
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35414 2 +     51376 -A--T
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 3
s Cuniculus_paca.CunPac_flattened_line_231100                 2625 2 +      5455 -G--T
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 I 3
s Dasyprocta_punctata.DasPun_flattened_line_206793            1016 2 +      3576 -A--T
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 I 3
s Dasypus_novemcinctus.JH564415.1                            60826 2 +   2246927 -a--a
i Dasypus_novemcinctus.JH564415.1                        C 0 I 3
s Daubentonia_madagascariensis.ctg71                      12532674 3 -  12879189 -AA-T
i Daubentonia_madagascariensis.ctg71                     C 0 I 4
s Delphinapterus_leucas.KZ290073.1                        16810951 2 +  35494412 -a--a
i Delphinapterus_leucas.KZ290073.1                       C 0 I 3
s Desmodus_rotundus.KZ672289.1                             8627690 2 +  20541912 -a--a
i Desmodus_rotundus.KZ672289.1                           C 0 I 3
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669178 2 +   1390856 -a--t
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 3
s Diceros_bicornis.DicBicMic_scaffold_5955                    2253 2 +    198055 -A--A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 3
s Dinomys_branickii.DinBra_scaffold_21862                    34075 2 +     67921 -A--G
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 3
s Dipodomys_ordii.KN672350.1                              18895585 4 +  37912305 -AATA
i Dipodomys_ordii.KN672350.1                             C 0 I 1
s Dipodomys_stephensi.DipSte_scaffold_75855                  11795 4 +     14536 -AAAA
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 I 1
s Dolichotis_patagonum.DolPat_scaffold_30833                 31270 2 -     42551 -A--T
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 I 3
s Eidolon_helvum.KE759718.1                                   7200 2 +     11740 -a--a
i Eidolon_helvum.KE759718.1                              C 0 I 3
s Elephantulus_edwardii.JH947257.1                         1088779 2 +  10337057 -a--t
i Elephantulus_edwardii.JH947257.1                       C 0 I 3
s Enhydra_lutris.KZ291758.1                               16325549 2 -  41312741 -a--a
i Enhydra_lutris.KZ291758.1                              C 0 I 3
s Eptesicus_fuscus.JH977646.1                              2143542 2 -  14770903 -A--A
i Eptesicus_fuscus.JH977646.1                            I 1 I 3
s Equus_asinus.JREZ01000139.1                              1279520 2 +   4378816 -a--c
i Equus_asinus.JREZ01000139.1                            C 0 I 3
s Equus_caballus.CM000403.2                               18527341 2 -  39960074 -a--c
i Equus_caballus.CM000403.2                              C 0 I 3
s Equus_przewalskii.KK951119.1                               29356 2 +    498745 -a--c
i Equus_przewalskii.KK951119.1                           C 0 I 3
s Erythrocebus_patas.Contig38                             21199706 2 -  21539334 -A--A
i Erythrocebus_patas.Contig38                            C 0 I 4
s Eschrichtius_robustus.EscRob_flattened_line_8968           10627 2 +    133382 -A--A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 3
s Eubalaena_japonica.EubJap_flattened_line_31514             24565 2 -     44125 -A--A
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 I 3
s Felis_catus.KN305074.1                                       400 3 -      2052 -a-aa
i Felis_catus.KN305074.1                                 C 0 I 3
s Felis_catus_fca126.CM031415.1                           20185166 3 + 205367284 -a-aa
i Felis_catus_fca126.CM031415.1                          C 0 I 3
s Felis_nigripes.FelNig_flattened_line_125938                10280 3 -     11347 -AA-A
i Felis_nigripes.FelNig_flattened_line_125938            C 0 I 3
s Fukomys_damarensis.KN121974.1                             848294 2 +   3816255 -a--a
i Fukomys_damarensis.KN121974.1                          C 0 I 3
s Galagoides_demidoff.k141_31856                              2985 1 -      3432 ----a
i Galagoides_demidoff.k141_31856                         C 0 I 4
s Galeopterus_variegatus.GalVar_scaffold_56069               25223 2 +     26054 -A--A
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 I 5
s Glis_glis.GliGli_scaffold_19807                            30134 2 +     49224 -A--A
i Glis_glis.GliGli_scaffold_19807                        C 0 I 1
s Gorilla_beringei.k141_2022027                               1269 2 +      3305 -A--A
i Gorilla_beringei.k141_2022027                          I 1 I 4
s Gorilla_gorilla.CYUI03002401.1                              5492 2 +      7071 -a--a
i Gorilla_gorilla.CYUI03002401.1                         I 1 I 4
s Graphiurus_murinus.GraMur_scaffold_10447                   29862 2 +     78134 -A--A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 1
s Helogale_parvula.HelPar_flattened_line_2585               230925 3 +    327341 -AA-G
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 3
s Heterocephalus_glaber.JH602082.1                        20659173 2 +  22651954 -a--a
i Heterocephalus_glaber.JH602082.1                       C 0 I 3
s Heterohyrax_brucei.HetBruBak_scaffold_173205                3142 2 -      3357 -T--A
i Heterohyrax_brucei.HetBruBak_scaffold_173205           C 0 I 3
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111807 2 +    128679 -A--A
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 I 3
s Hipposideros_armiger.JXIK01000431.1                       108151 2 +   1711038 -a--a
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 3
s Hipposideros_galeritus.HipGal_scaffold_29171               39590 2 +     43066 -A--A
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 I 3
s Hoolock_leuconedys.ctg274                                    429044 2 +    630532 -A--G
i Hoolock_leuconedys.ctg274                                 C 0 I 4
s Hyaena_hyaena.HyaHya_flattened_line_26932                  33035 3 +     55795 -AA-A
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 3
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19628 2 -    143317 -A--T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 3
s Hylobates_agilis.k141_307679                               11962 2 -     15490 -A--A
i Hylobates_agilis.k141_307679                           C 0 I 4
s Hylobates_klossii.k141_282416                              53967 2 +     67168 -A--A
i Hylobates_klossii.k141_282416                          C 0 I 4
s Hylobates_pileatus_b.LG02                                     189537414 2 - 191637585 -A--A
i Hylobates_pileatus_b.LG02                                     C 0 I 4
s Hylobates_pileatus_a.tarseq_633                            3330512 2 -  11177569 -A--A
i Hylobates_pileatus_a.tarseq_633                          C 0 I 4
s Hystrix_cristata.HysCri_scaffold_5660                      80717 2 +    135385 -A--T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 3
s Ictidomys_tridecemlineatus.JH393364.1                    7514360 2 -   7955117 -a--a
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 3
s Indri_indri.k141_3655594                                   17936 3 +     31101 -AA-T
i Indri_indri.k141_3655594                               C 0 I 4
s Inia_geoffrensis.IniGeo_flattened_line_48101               22168 2 +     23964 -A--A
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 I 3
s Jaculus_jaculus.JH725527.1                               8271146 2 -   9596543 -a--a
i Jaculus_jaculus.JH725527.1                             C 0 I 3
s Kogia_breviceps.KogBre_flattened_line_192630                1435 2 -      3359 -A--A
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 I 3
s Lasiurus_borealis.LasBor_scaffold_32767                    11681 2 -     42476 -A--A
i Lasiurus_borealis.LasBor_scaffold_32767                I 1 I 3
s Lepilemur_ankaranensis.k141_596936                          6568 3 -     23766 -AA-T
i Lepilemur_ankaranensis.k141_596936                     C 0 I 4
s Lepilemur_dorsalis.k141_577674                             24515 3 +     45836 -AA-T
i Lepilemur_dorsalis.k141_577674                         C 0 I 4
s Lepilemur_ruficaudatus.k141_420445                         31425 3 -     32627 -AA-T
i Lepilemur_ruficaudatus.k141_420445                     C 0 I 4
s Lepilemur_septentrionalis.k141_185316                      22573 3 +     54090 -AA-T
i Lepilemur_septentrionalis.k141_185316                  C 0 I 4
s Leptonychotes_weddellii.KB714746.1                       3035882 2 +   3914936 -a--a
i Leptonychotes_weddellii.KB714746.1                     C 0 I 3
s Lepus_americanus.LepAme_scaffold_107385                     3368 2 -     14121 -A--A
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 3
s Lipotes_vexillifer.KE559953.1                             267249 2 -    662738 -a--a
i Lipotes_vexillifer.KE559953.1                          C 0 I 3
s Lophocebus_aterrimus.ctg367                              1431230 2 +   1826925 -A--A
i Lophocebus_aterrimus.ctg367                            I 2 I 4
s Loris_lydekkerianus.k141_2539221                             487 3 +     11245 -a-aa
i Loris_lydekkerianus.k141_2539221                       C 0 I 4
s Loris_tardigradus.ctg83                                   999322 3 +   6120653 -a-aa
i Loris_tardigradus.ctg83                                C 0 I 4
s Loxodonta_africana.GL010049.1                            4214265 2 -  43346337 -t--a
i Loxodonta_africana.GL010049.1                          C 0 I 3
s Lycaon_pictus.CM007581.1                                17951498 3 -  59628241 -a-ta
i Lycaon_pictus.CM007581.1                               C 0 I 3
s Macaca_arctoides.k141_2326796                               1416 2 +     40492 -A--A
i Macaca_arctoides.k141_2326796                          C 0 I 4
s Macaca_assamensis.Contig5                               59670676 2 +  60120075 -A--A
i Macaca_assamensis.Contig5                              C 0 I 4
s Macaca_cyclopis.k119_18836                                  7174 2 -     26193 -A--A
i Macaca_cyclopis.k119_18836                             C 0 I 4
s Macaca_fascicularis.k141_814140                            74964 2 -    114318 -A--A
i Macaca_fascicularis.k141_814140                        C 0 I 4
s Macaca_fuscata.k119_255327                                   687 2 -     23192 -A--A
i Macaca_fuscata.k119_255327                             C 0 I 4
s Macaca_leonina.k141_3550399                                10136 2 -     29190 -A--A
i Macaca_leonina.k141_3550399                            C 0 I 4
s Macaca_maura.k141_2733130                                  18707 2 +     37952 -A--A
i Macaca_maura.k141_2733130                              C 0 I 4
s Macaca_mulatta.NC_041758.1                             186833795 2 + 187317192 -a--a
i Macaca_mulatta.NC_041758.1                             C 0 I 4
s Macaca_nemestrina.KQ007038.1                            25452353 2 -  25927173 -a--a
i Macaca_nemestrina.KQ007038.1                           C 0 I 4
s Macaca_nigra.k141_1655396                                  74556 2 +     89720 -A--A
i Macaca_nigra.k141_1655396                              C 0 I 4
s Macaca_radiata.k141_3680011                                 1553 2 +     20474 -A--A
i Macaca_radiata.k141_3680011                            C 0 I 4
s Macaca_siberu.k141_635500                                   1354 2 -     14993 -A--A
i Macaca_siberu.k141_635500                              C 0 I 4
s Macaca_silenus.Contig273                                  323986 2 -    668171 -A--A
i Macaca_silenus.Contig273                               C 0 I 4
s Macaca_thibetana.k99_7456                                  15496 2 -     15935 -A--A
i Macaca_thibetana.k99_7456                              C 0 I 4
s Macaca_tonkeana.k141_1498238                               20293 2 -     45290 -A--A
i Macaca_tonkeana.k141_1498238                           I 1 I 4
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87343 2 +     94391 -A--A
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 3
s Mandrillus_leucophaeus.scaffold280                      23931846 2 -  24302211 -A--A
i Mandrillus_leucophaeus.scaffold280                     C 0 I 4
s Mandrillus_sphinx.Contig270                               346026 2 +    752769 -A--A
i Mandrillus_sphinx.Contig270                            C 0 I 4
s Manis_javanica.JSZB01003497.1                              15386 2 +    737560 -a--a
i Manis_javanica.JSZB01003497.1                          C 0 I 3
s Manis_pentadactyla.KN006162.1                              46775 2 -    317179 -a--a
i Manis_pentadactyla.KN006162.1                          C 0 I 3
s Marmota_marmota.CZRN01000018.1                          33097213 2 -  40650429 -a--a
i Marmota_marmota.CZRN01000018.1                         C 0 I 3
s Megaderma_lyra.MegLyr_scaffold_4542                         6597 2 -    207569 -A--A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 3
s Mellivora_capensis.MelCap_flattened_line_69365              6014 2 +     13704 -A--A
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 3
s Mesoplodon_bidens.MesBid_scaffold_108144                    2836 2 +     10310 -A--A
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 I 3
s Microcebus_murinus.CM007674.1                           18283094 3 -  93316391 -a-at
i Microcebus_murinus.CM007674.1                          C 0 I 4
s Microgale_talazaci.MicTal_scaffold_6613                    15241 2 -    145209 -A--A
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 3
s Micronycteris_hirsuta.MicHir_scaffold_52381                13201 2 -     19307 -A--A
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 3
s Miniopterus_natalensis.LDJU01000034.1                    1848632 2 +   8254450 -a--a
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 3
s Miniopterus_schreibersii.MinSch_scaffold_18080             32501 2 +     64694 -A--A
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 3
s Miopithecus_ogouensis.k141_534055                           3583 2 -     28506 -A--A
i Miopithecus_ogouensis.k141_534055                      C 0 I 4
s Mirounga_angustirostris.MirAng_flattened_line_22144        62212 2 -     63350 -A--A
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 I 3
s Mirza_zaza.k141_952172                                      4455 3 -     37649 -AA-T
i Mirza_zaza.k141_952172                                 C 0 I 4
s Monodon_monoceros.MonMon_M_scaffold_103                    26341 2 -    437263 -A--A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 3
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137605 2 -    366855 -A--A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 3
s Mungos_mungo.MunMun_flattened_line_23663                   24117 1 +     37127 ----A
i Mungos_mungo.MunMun_flattened_line_23663               I 1 I 3
s Murina_feae.MurFea_scaffold_85699                           4691 2 +     14753 -A--A
i Murina_feae.MurFea_scaffold_85699                      I 1 I 3
s Muscardinus_avellanarius.MusAve_scaffold_82313              2129 2 +     14296 -A--A
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 1
s Mustela_putorius.JH418006.1                               297436 2 -  14710649 -A--A
i Mustela_putorius.JH418006.1                            C 0 I 3
s Myocastor_coypus.MyoCoy_scaffold_10123                     70900 2 -     80779 -A--T
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 I 3
s Myotis_brandtii.KE162005.1                                277799 2 -  10118263 -A--A
i Myotis_brandtii.KE162005.1                             I 1 I 3
s Myotis_davidii.KB100139.1                                1585370 2 -   6019432 -A--A
i Myotis_davidii.KB100139.1                              I 1 I 3
s Myotis_lucifugus.GL429869.1                              3901587 2 -   4330536 -A--A
i Myotis_lucifugus.GL429869.1                            I 1 I 3
s Myotis_myotis.MyoMyo_scaffold_28916                        32136 2 +     33610 -A--A
i Myotis_myotis.MyoMyo_scaffold_28916                    I 1 I 3
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              185866 2 +    196477 -A--T
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 I 3
s Nannospalax_galili.KL204047.1                            2025294 2 -   3037898 -a--t
i Nannospalax_galili.KL204047.1                          C 0 I 1
s Nasalis_larvatus.k141_413338                                9596 2 +     21681 -A--A
i Nasalis_larvatus.k141_413338                           C 0 I 4
s Neophocaena_asiaeorientalis.KZ687982.1                   5865297 2 +   7148211 -a--a
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 3
s Noctilio_leporinus.NocLep_scaffold_251                    756165 2 +    783361 -A--A
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 3
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145759 3 -   9404916 -a-ta
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 3
s Nycticebus_bengalensis.LG01                            102574290 3 - 196305487 -AA-A
i Nycticebus_bengalensis.LG01                            C 0 I 4
s Nycticebus_coucang.k141_5327727                             1976 3 +      8486 -AA-A
i Nycticebus_coucang.k141_5327727                        C 0 I 4
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744718 3 + 199412804 -a-aa
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 4
s Odobenus_rosmarus.KB229312.1                              500501 2 -   2017862 -a--a
i Odobenus_rosmarus.KB229312.1                           C 0 I 3
s Orcinus_orca.KB316932.1                                  2781212 2 -  10937097 -a--a
i Orcinus_orca.KB316932.1                                C 0 I 3
s Orycteropus_afer.OryAfe_flattened_line_144387               6603 2 -     18566 -A--A
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 I 3
s Oryctolagus_cuniculus.CM000791.1                        67144210 2 + 174332312 -a--a
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 3
s Otocyon_megalotis.JAEUCK010005147.1                       458513 3 -    559221 -a-ta
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 3
s Pan_paniscus.KQ411613.1                                    35982 1 +     80009 ----a
i Pan_paniscus.KQ411613.1                                I 1 I 4
s Pan_troglodytes.CM009242.2                             187628680 3 + 189151597 aa--a
i Pan_troglodytes.CM009242.2                             N 0 N 0
s Panthera_onca.PanOnc_flattened_line_3271                  140376 3 +    230217 -AA-A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 3
s Panthera_pardus.KV860321.1                                251905 3 +  18783137 -a-aa
i Panthera_pardus.KV860321.1                             C 0 I 3
s Panthera_tigris.KE722367.1                               4710350 3 -   8748460 -a-aa
i Panthera_tigris.KE722367.1                             C 0 I 3
s Papio_anubis.CM001495.2                                183437170 2 + 183742232 -a--a
i Papio_anubis.CM001495.2                                I 2 I 4
s Papio_cynocephalus.k141_4307930                             1232 2 +     20448 -A--A
i Papio_cynocephalus.k141_4307930                        I 2 I 4
s Papio_hamadryas.Contig39                                20557854 2 +  20919399 -A--A
i Papio_hamadryas.Contig39                               I 2 I 4
s Papio_kindae.k141_4051466                                   1432 2 -      1598 -A--A
i Papio_kindae.k141_4051466                              I 2 I 4
s Papio_papio.k141_802527                                     3264 2 +     27711 -A--A
i Papio_papio.k141_802527                                I 2 I 4
s Papio_ursinus.k141_3428135                                  3253 2 +      9205 -A--A
i Papio_ursinus.k141_3428135                             I 2 I 4
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      1174 3 -     78924 -AA-T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 3
s Perodicticus_ibeanus.k141_855320                            4468 3 +     13100 -a-aa
i Perodicticus_ibeanus.k141_855320                       C 0 I 4
s Perodicticus_potto.k141_1092580                             2836 3 +     25941 -AA-A
i Perodicticus_potto.k141_1092580                        C 0 I 4
s Perognathus_longimembris.PerPac_flattened_line_34437       25143 4 +     32600 -AATA
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 I 1
s Petromus_typicus.PetTyp_scaffold_42190                     25645 1 -     29689 -A---
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 I 3
s Phocoena_phocoena.PhoPho_flattened_line_24159               8259 2 +     63832 -A--A
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 3
s Piliocolobus_badius.k141_1234363                           38113 2 +     62158 -A--A
i Piliocolobus_badius.k141_1234363                       C 0 I 4
s Piliocolobus_gordonorum.k141_381342                        32840 2 +     89929 -A--A
i Piliocolobus_gordonorum.k141_381342                    C 0 I 4
s Piliocolobus_kirkii.k141_448987                            34256 2 +     51399 -A--A
i Piliocolobus_kirkii.k141_448987                        C 0 I 4
s Piliocolobus_tephrosceles.PDMG02000141.1                14290477 2 -  14605196 -a--a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 4
s Pipistrellus_pipistrellus.PipPip_scaffold_7723             79157 2 +     79650 -A--A
i Pipistrellus_pipistrellus.PipPip_scaffold_7723         I 1 I 3
s Platanista_gangetica.PlaMin_flattened_line_32310           33965 2 +     35617 -A--A
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 I 3
s Pongo_abelii.CM009266.2                                189125017 2 + 189387572 -a--a
i Pongo_abelii.CM009266.2                                C 0 I 4
s Pongo_pygmaeus.ctg66                                     9564860 2 +   9816681 -A--A
i Pongo_pygmaeus.ctg66                                   C 0 I 4
s Presbytis_comata.k141_677006                               67756 2 -     81375 -A--A
i Presbytis_comata.k141_677006                           C 0 I 4
s Presbytis_mitrata.k141_2342859                              9583 2 +     10147 -A--A
i Presbytis_mitrata.k141_2342859                         C 0 I 4
s Procavia_capensis.ProCapCap_scaffold_85530                  9745 2 -     22811 -T--A
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 I 3
s Propithecus_coquerelli.NW_012148875.1                     985809 3 +   2598838 -a-at
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 4
s Propithecus_coronatus.k141_347390                          24097 3 +     38485 -AA-T
i Propithecus_coronatus.k141_347390                      C 0 I 4
s Propithecus_diadema.k141_357118                              259 3 +      4256 -AA-T
i Propithecus_diadema.k141_357118                        C 0 I 4
s Propithecus_edwardsi.k141_1176054                          21617 3 +     35766 -AA-T
i Propithecus_edwardsi.k141_1176054                      C 0 I 4
s Propithecus_perrieri.k141_1630595                          16896 3 +     17239 -AA-T
i Propithecus_perrieri.k141_1630595                      C 0 I 4
s Propithecus_tattersalli.k141_790011                        23611 3 -     67325 -AA-T
i Propithecus_tattersalli.k141_790011                    C 0 I 4
s Propithecus_verreauxi.k141_1019028                         13327 3 -     13615 -AA-T
i Propithecus_verreauxi.k141_1019028                     C 0 I 4
s Pteronotus_parnellii.KE909381.1                            10984 2 -     21811 -a--a
i Pteronotus_parnellii.KE909381.1                        C 0 I 3
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36455 2 +     42204 -A--A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 3
s Pteropus_alecto.KB030862.1                              22973473 2 +  28871421 -a--a
i Pteropus_alecto.KB030862.1                             C 0 I 3
s Pteropus_vampyrus.KN534172.1                                1409 2 -      8028 -a--a
i Pteropus_vampyrus.KN534172.1                           C 0 I 3
s Puma_concolor.QAVW01001104.1                            20262885 3 -  38429054 -a-aa
i Puma_concolor.QAVW01001104.1                           C 0 I 3
s Pygathrix_cinerea.k141_1153803                              9585 2 -     91421 -A--A
i Pygathrix_cinerea.k141_1153803                         C 0 I 4
s Pygathrix_nigripes_b.ctg100                                 7603720 1 +   7812017 -A---
i Pygathrix_nigripes_b.ctg100                               C 0 I 4
s Pygathrix_nigripes_a.k141_215492                              9558 2 -     72585 -A--A
i Pygathrix_nigripes_a.k141_215492                         C 0 I 4
s Rhinolophus_sinicus.LVEH01000134.1                        366698 2 -   3329780 -a--a
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 3
s Rhinopithecus_bieti.k119_217274                              971 2 -     11128 -A--A
i Rhinopithecus_bieti.k119_217274                        C 0 I 4
s Rhinopithecus_roxellana.NC_044550.1                     91230348 2 - 195417433 -a--a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 4
s Rhinopithecus_strykeri.ctg102                            7666056 2 +   7961872 -A--A
i Rhinopithecus_strykeri.ctg102                          C 0 I 4
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84457 2 -     96226 -A--A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 3
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151166 2 -    313613 -A--A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 8
s Semnopithecus_entellus.k141_11662                          14100 2 -     19888 -A--A
i Semnopithecus_entellus.k141_11662                      C 0 I 4
s Semnopithecus_hypoleucos.k141_1615806                      21305 2 +     39453 -A--A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 I 4
s Semnopithecus_johnii.k141_670120                            1829 2 +     27826 -A--A
i Semnopithecus_johnii.k141_670120                       C 0 I 4
s Semnopithecus_priam.k141_638794                             1351 2 -     19483 -A--A
i Semnopithecus_priam.k141_638794                        C 0 I 4
s Semnopithecus_schistaceus.k141_1584426                      1413 2 +      7198 -A--A
i Semnopithecus_schistaceus.k141_1584426                 C 0 I 4
s Semnopithecus_vetulus.k141_1200928                          9673 2 +     15514 -A--A
i Semnopithecus_vetulus.k141_1200928                     C 0 I 4
s Solenodon_paradoxus.SolPar_flattened_line_5840            187475 2 -    191337 -A--A
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 I 3
s Sorex_araneus.JH798187.1                                13646841 2 -  18376816 -A--A
i Sorex_araneus.JH798187.1                               C 0 I 1
s Spermophilus_dauricus.KZ294078.1                         1948003 2 -   3870691 -a--a
i Spermophilus_dauricus.KZ294078.1                       C 0 I 3
s Spilogale_gracilis.SpiGra_flattened_line_13525             26998 2 +     97271 -A--A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 3
s Suricata_suricatta.SurSur_flattened_line_6629               6952 3 -    196729 -AA-A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 3
s Sus_scrofa.CM000828.4                                   62882253 2 -  69701581 -a--a
i Sus_scrofa.CM000828.4                                  C 0 I 3
s Symphalangus_syndactylus.tarseq_199                      1087649 2 -   1523678 -A--G
i Symphalangus_syndactylus.tarseq_199                    C 0 I 4
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6602 2 +     41958 -A--A
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 3
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69230 2 +    116680 -A--T
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 I 3
s Tapirus_indicus.TapInd_scaffold_9301                      114977 2 -    156842 -A--A
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 3
s Tapirus_terrestris.TapTer_scaffold_755                    383429 2 +    539355 -A--A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 3
s Tarsius_lariang.k141_2201908                               10414 2 +     70052 -A--A
i Tarsius_lariang.k141_2201908                           C 0 I 14
s Tarsius_wallacei.k141_780063                               14719 2 +     25099 -A--A
i Tarsius_wallacei.k141_780063                           C 0 I 14
s Theropithecus_gelada.CM009954.1                        186422679 2 + 186847797 -a--a
i Theropithecus_gelada.CM009954.1                        I 2 I 4
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              102985 1 +    114563 -A---
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 3
s Tolypeutes_matacus.TolMat_scaffold_228639                   1636 2 +      8208 -A--A
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 I 3
s Tonatia_saurophila.TonSau_scaffold_294                     78746 2 +    610378 -A--A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 3
s Trachypithecus_auratus.k141_722599                          5410 2 -     20410 -A--A
i Trachypithecus_auratus.k141_722599                     C 0 I 4
s Trachypithecus_crepusculus.k141_1194022                     9602 2 +     15221 -A--A
i Trachypithecus_crepusculus.k141_1194022                C 0 I 4
s Trachypithecus_cristatus.k141_580354                        5510 2 +     19930 -A--A
i Trachypithecus_cristatus.k141_580354                   C 0 I 4
s Trachypithecus_francoisi.k141_1412647                       1937 2 -     19997 -A--A
i Trachypithecus_francoisi.k141_1412647                  C 0 I 4
s Trachypithecus_geei.k141_277701                            42056 2 -     60166 -A--A
i Trachypithecus_geei.k141_277701                        C 0 I 4
s Trachypithecus_germaini.k141_912491                         9528 2 -     27529 -A--A
i Trachypithecus_germaini.k141_912491                    C 0 I 4
s Trachypithecus_hatinhensis.k141_143409                      9468 2 -     18194 -A--A
i Trachypithecus_hatinhensis.k141_143409                 C 0 I 4
s Trachypithecus_laotum.k141_907409                           3204 2 -     21137 -A--A
i Trachypithecus_laotum.k141_907409                      C 0 I 4
s Trachypithecus_leucocephalus.k141_587342                    1906 2 -     10723 -A--A
i Trachypithecus_leucocephalus.k141_587342               C 0 I 4
s Trachypithecus_melamera.k141_434728                         1060 1 +      9834 -A---
i Trachypithecus_melamera.k141_434728                    C 0 I 4
s Trachypithecus_obscurus.k141_190785                        19374 2 +     32220 -A--A
i Trachypithecus_obscurus.k141_190785                    C 0 I 7
s Trachypithecus_phayrei.ctg124                            5933474 2 +   6242583 -A--A
i Trachypithecus_phayrei.ctg124                          C 0 I 4
s Trachypithecus_pileatus.k141_2007326                        2719 2 +     20839 -A--A
i Trachypithecus_pileatus.k141_2007326                   C 0 I 4
s Tragulus_javanicus.TraJav_scaffold_140459                    254 2 -      1748 -A--A
i Tragulus_javanicus.TraJav_scaffold_140459              I 3 I 3
s Tursiops_truncatus.MRVK01000835.1                       15737459 2 +  33153633 -a--a
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 3
s Uropsilus_gracilis.UroGra_scaffold_97021                    1690 2 -      4736 -A--A
i Uropsilus_gracilis.UroGra_scaffold_97021               C 0 I 63
s Ursus_maritimus.KK499267.1                               4846697 2 -   5085361 -a--a
i Ursus_maritimus.KK499267.1                             C 0 I 3
s Vicugna_pacos.KN270157.1                                 5368160 2 -   5488506 -a--a
i Vicugna_pacos.KN270157.1                               C 0 I 3
s Vulpes_lagopus.VulLag_flattened_line_30954                  7174 3 -     43706 -a-ta
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 3
s Xerus_inauris.XerIna_scaffold_48378                        19497 2 -     24430 -A--A
i Xerus_inauris.XerIna_scaffold_48378                    C 0 I 3
s Zalophus_californianus.ZalCal_flattened_line_63728          1622 2 +      2932 -A--A
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 I 3
s Zapus_hudsonius.ZapHud_scaffold_11398                       9781 2 +     63895 -A--A
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 3
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11151 2 +     12536 -A--A
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 I 3
e Varecia_variegata.k141_1128296                              7155 0 +     24756 C
e Varecia_rubra.k141_590885                                   7107 0 +     50397 C
e Tupaia_tana.TupTan_flattened_line_97126                     2981 3 -     10553 I
e Tupaia_chinensis.KB320699.1                              2149362 3 +   4065304 I
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Saiga_tatarica.SaiTat_scaffold_373180                       3225 222 +      4321 I
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4576 218 +     55207 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414 0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1264036 222 -   2937107 I
e Ovis_canadensis.OviCan_scaffold_2572                      173103 222 -    191736 I
e Ovis_aries.CM001607.2                                   17584682 222 +  44047080 I
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144328 218 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1355292 2 +   3988456 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Moschus_moschiferus.MosMos_scaffold_61429                  27091 222 -     27816 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lemur_catta.scaffold_24                                 15519761 0 -  30322482 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17151 222 +     36099 I
e Hapalemur_occidentalis.k141_907772                          9234 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402 0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298 0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517 0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                               9432 0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267 0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247 0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321 0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369 0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369 0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184 0 -     25546 C
e Eulemur_collaris.k141_377015                                2154 0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453 0 -     14127 C
e Erinaceus_europaeus.JH835339.1                           3320548 4609 -   7059049 I
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       309953 220 +    607251 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Catagonus_wagneri.CatWag_scaffold_2839                     88998 0 +    217609 C
e Capra_hircus.CM004588.1                                 18059667 222 -  44709034 I
e Capra_aegagrus.CM003241.1                               18828947 222 +  46296322 I
e Bubalus_bubalis.KI419123.1                               2818124 220 +   4408762 I
e Bos_taurus.CM000203.6                                   18082634 220 +  45695690 I
e Bos_mutus.JH880303.1                                     1124552 224 -   1948126 I
e Bos_indicus.CM003047.1                                  20271996 220 +  48749331 I
e Bison_bison.KN261452.1                                    198791 220 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    25751 222 +     34529 I
e Antilocapra_americana.AntAmePen_scaffold_12469             97280 223 -    100397 I
e Ammotragus_lervia.NIVO01071767.1                          674829 222 -   2318259 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                        623 3 +     62944 G-A-A
s Acinonyx_jubatus.LLWD01001279.1                           816742 3 -   1699592 g-a-a
i Acinonyx_jubatus.LLWD01001279.1                        I 3 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506701 3 -  29979442 g-a-a
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 3 C 0
s Ailurus_fulgens.LNAC01001112.1                             74992 3 -    347723 g-a-a
i Ailurus_fulgens.LNAC01001112.1                         I 3 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64784 3 -     89534 A-A-A
i Allactaga_bullata.AllBul_scaffold_9566                 I 3 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9098 3 -     52922 G-A-A
i Allenopithecus_nigroviridis.k141_3361533               I 4 C 0
s Allochrocebus_lhoesti.k141_4309873                          9023 3 -     28001 G-A-A
i Allochrocebus_lhoesti.k141_4309873                     I 4 C 0
s Allochrocebus_preussi.k141_310680                           9149 3 -      9772 G-A-A
i Allochrocebus_preussi.k141_310680                      I 4 C 0
s Allochrocebus_solatus.k141_166128                            306 3 -     12518 G-A-A
i Allochrocebus_solatus.k141_166128                      I 4 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      182894 3 +    412891 G-A-A
i Anoura_caudifer.AnoCau_scaffold_1412                   I 3 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7066 3 +     20879 G-G-A
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 38 C 0
s Arctocebus_calabarensis.k141_288239                        14242 4 +     17124 GAA-A
i Arctocebus_calabarensis.k141_288239                    I 4 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2246 3 +     43469 G-A-A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 3 C 0
s Avahi_laniger.k141_765380                                  49086 3 -     92717 G-A-A
i Avahi_laniger.k141_765380                              I 4 C 0
s Avahi_peyrierasi.k141_1424874                              49711 3 +     85213 G-A-A
i Avahi_peyrierasi.k141_1424874                          I 4 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191320 3 +  23207421 g-a-a
i Balaenoptera_acutorostrata.KI537508.1                  I 3 C 0
s Balaenoptera_bonaerensis.DF707048.1                         1786 3 -     18090 g-a-a
i Balaenoptera_bonaerensis.DF707048.1                    I 3 C 0
s Camelus_bactrianus.KN276810.1                            9998676 3 -  17673402 g-a-a
i Camelus_bactrianus.KN276810.1                          I 3 C 0
s Camelus_dromedarius.KN272107.1                           2331140 3 -   7040546 g-a-a
i Camelus_dromedarius.KN272107.1                         I 3 C 0
s Camelus_ferus.KB017975.1                                  399416 3 -   1652518 g-a-a
i Camelus_ferus.KB017975.1                               I 3 C 0
s CanFam4.chr16                                           17795556 3 -  60362399 G-A-A
i CanFam4.chr16                                          I 3 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181613 3 -    185531 G-A-A
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 3 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031000 3 -   9314153 g-a-a
i Canis_lupus_dingo.QKWQ01000480.1                       I 3 C 0
s Canis_lupus_familiaris.chr16                            17955264 3 -  59632846 g-a-a
i Canis_lupus_familiaris.chr16                           I 3 C 0
s Canis_lupus_orion.HG994398.1                            18496568 3 +  63665305 g-a-a
i Canis_lupus_orion.HG994398.1                           I 3 C 0
s Capromys_pilorides.CapPil_scaffold_65020                     718 3 -     12242 G-G-A
i Capromys_pilorides.CapPil_scaffold_65020               I 3 C 0
s Carlito_syrichta.NW_007259797.1                           140815 3 -    496798 g-a-a
i Carlito_syrichta.NW_007259797.1                        I 14 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2664 3 -     11696 G-A-A
i Carollia_perspicillata.CarPer_scaffold_92756           I 3 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133431 3 +    179628 G-G-A
i Castor_canadensis.CasCan_scaffold_2074                 I 1 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     88998 3 +    217609 G-A-A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18347254 3 -  23392119 g-g-A
i Cavia_aperea.AVPZ01000300.1                            I 3 C 0
s Cavia_porcellus.DS562891.1                              18359514 3 -  23407841 g-g-A
i Cavia_porcellus.DS562891.1                             I 3 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98389 3 +    143979 G-G-A
i Cavia_tschudii.CavTsc_scaffold_8919                    I 3 C 0
s Cephalopachus_bancanus.k141_2037105                         4731 3 -      8605 G-A-A
i Cephalopachus_bancanus.k141_2037105                    I 14 C 0
s Ceratotherium_simum.JH767749.1                          12227650 3 +  27778364 g-a-a
i Ceratotherium_simum.JH767749.1                         I 3 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2368 3 -      3715 G-A-A
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     I 3 C 0
s Cercocebus_atys.KQ010504.1                               4470067 3 +   4669795 g-a-a
i Cercocebus_atys.KQ010504.1                             I 4 C 0
s Cercocebus_chrysogaster.k141_393940                         8616 3 -     19203 G-A-A
i Cercocebus_chrysogaster.k141_393940                    I 4 C 0
s Cercocebus_lunulatus.k141_3846941                           3035 3 +      8260 G-A-A
i Cercocebus_lunulatus.k141_3846941                      I 4 C 0
s Cercocebus_torquatus.k141_3057011                           3265 3 +     27781 G-A-A
i Cercocebus_torquatus.k141_3057011                      I 4 C 0
s Cercopithecus_ascanius.k141_1024104                         3411 3 -     20310 G-A-A
i Cercopithecus_ascanius.k141_1024104                    I 4 C 0
s Cercopithecus_cephus.k141_1078548                           6395 3 +     29689 G-A-A
i Cercopithecus_cephus.k141_1078548                      I 4 C 0
s Cercopithecus_diana.k141_2427854                             748 3 +      9989 G-A-A
i Cercopithecus_diana.k141_2427854                       I 4 C 0
s Cercopithecus_hamlyni.k141_187466                           9083 3 -     27936 G-A-A
i Cercopithecus_hamlyni.k141_187466                      I 4 C 0
s Cercopithecus_lowei.k141_457449                             9102 3 -     11289 G-A-A
i Cercopithecus_lowei.k141_457449                        I 4 C 0
s Cercopithecus_albogularis.ctg5                                38811478 3 +  39242232 G-A-A
i Cercopithecus_albogularis.ctg5                               I 4 C 0
s Cercopithecus_mona.ctg39                                21217169 3 -  21565898 G-A-A
i Cercopithecus_mona.ctg39                               I 4 C 0
s Cercopithecus_neglectus.k141_2526306                       34289 3 -     53127 G-A-A
i Cercopithecus_neglectus.k141_2526306                   I 4 C 0
s Cercopithecus_nictitans.k141_3278028                        1581 3 +      7159 G-A-A
i Cercopithecus_nictitans.k141_3278028                   I 4 C 0
s Cercopithecus_petaurista.k141_807961                        9094 3 -     27947 G-A-A
i Cercopithecus_petaurista.k141_807961                   I 4 C 0
s Cercopithecus_pogonias.k141_822820                          9070 3 +     17596 G-A-A
i Cercopithecus_pogonias.k141_822820                     I 4 C 0
s Cercopithecus_roloway.k141_3180641                         39564 3 -     41420 G-A-A
i Cercopithecus_roloway.k141_3180641                     I 4 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4585 3 -      6351 G-A-A
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       I 3 C 0
s Cheirogaleus_major.k141_333249                             16501 3 -     52598 G-A-A
i Cheirogaleus_major.k141_333249                         I 4 C 0
s Cheirogaleus_medius.k141_1055463                           11850 3 +     57038 G-A-A
i Cheirogaleus_medius.k141_1055463                       I 4 C 0
s Chinchilla_lanigera.JH722012.1                           1248284 3 +   2543920 g-g-a
i Chinchilla_lanigera.JH722012.1                         I 3 C 0
s Chlorocebus_aethiops.ctg25                              18423033 3 -  18827391 G-A-A
i Chlorocebus_aethiops.ctg25                             I 4 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9476 3 -     50209 G-A-A
i Chlorocebus_pygerythrus.k141_1025673                   I 4 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416481 3 + 135778131 g-a-a
i Chlorocebus_sabaeus.CM001947.1                         I 4 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 14911 3 +     19366 G-A-A
i Choloepus_didactylus.ChoDid_scaffold_45914             I 3 C 0
s Choloepus_hoffmanni.KN194906.1                            170006 3 +    839153 g-a-a
i Choloepus_hoffmanni.KN194906.1                         I 3 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_172426               9020 3 -     10935 A-T-A
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          I 3 C 0
s Colobus_angolensis.KN981557.1                            1905001 3 +   2368649 g-a-a
i Colobus_angolensis.KN981557.1                          I 4 C 0
s Colobus_guereza.LG01                                   199944619 3 + 200372422 G-A-A
i Colobus_guereza.LG01                                   I 4 C 0
s Colobus_polykomos.k141_906115                              31513 3 +     84244 G-A-A
i Colobus_polykomos.k141_906115                          I 4 C 0
s Condylura_cristata.JH655891.1                           17545763 3 -  53390261 g-a-a
i Condylura_cristata.JH655891.1                          I 7 I 3
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10281 3 -     20389 G-A-A
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 3 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             17760 3 -     87169 G-A-A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 3 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35419 3 +     51376 G-C-A
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 3 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2630 3 +      5455 G-G-A
i Cuniculus_paca.CunPac_flattened_line_231100            I 3 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1021 3 +      3576 G-G-A
i Dasyprocta_punctata.DasPun_flattened_line_206793       I 3 C 0
s Dasypus_novemcinctus.JH564415.1                            60831 3 +   2246927 g-g-a
i Dasypus_novemcinctus.JH564415.1                        I 3 C 0
s Daubentonia_madagascariensis.ctg71                      12532681 3 -  12879189 G-A-A
i Daubentonia_madagascariensis.ctg71                     I 4 C 0
s Delphinapterus_leucas.KZ290073.1                        16810956 3 +  35494412 g-a-a
i Delphinapterus_leucas.KZ290073.1                       I 3 C 0
s Desmodus_rotundus.KZ672289.1                             8627695 3 +  20541912 g-A-A
i Desmodus_rotundus.KZ672289.1                           I 3 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669183 3 +   1390856 g-a-a
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 3 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2258 3 +    198055 G-A-A
i Diceros_bicornis.DicBicMic_scaffold_5955               I 3 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34080 3 +     67921 G-G-A
i Dinomys_branickii.DinBra_scaffold_21862                I 3 C 0
s Dipodomys_ordii.KN672350.1                              18895590 3 +  37912305 G-T-G
i Dipodomys_ordii.KN672350.1                             I 1 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  11800 3 +     14536 G-T-G
i Dipodomys_stephensi.DipSte_scaffold_75855              I 1 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31275 3 -     42551 G-G-A
i Dolichotis_patagonum.DolPat_scaffold_30833             I 3 C 0
s Eidolon_helvum.KE759718.1                                   7205 3 +     11740 g-t-a
i Eidolon_helvum.KE759718.1                              I 3 C 0
s Elephantulus_edwardii.JH947257.1                         1088784 3 +  10337057 g-t-A
i Elephantulus_edwardii.JH947257.1                       I 3 C 0
s Enhydra_lutris.KZ291758.1                               16325554 3 -  41312741 g-a-a
i Enhydra_lutris.KZ291758.1                              I 3 C 0
s Eptesicus_fuscus.JH977646.1                              2143547 3 -  14770903 G-A-A
i Eptesicus_fuscus.JH977646.1                            I 3 C 0
s Equus_asinus.JREZ01000139.1                              1279525 3 +   4378816 g-a-a
i Equus_asinus.JREZ01000139.1                            I 3 C 0
s Equus_caballus.CM000403.2                               18527346 3 -  39960074 g-a-a
i Equus_caballus.CM000403.2                              I 3 C 0
s Equus_przewalskii.KK951119.1                               29361 3 +    498745 g-a-a
i Equus_przewalskii.KK951119.1                           I 3 C 0
s Erythrocebus_patas.Contig38                             21199712 3 -  21539334 G-A-A
i Erythrocebus_patas.Contig38                            I 4 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10632 3 +    133382 G-A-A
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 3 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24570 3 -     44125 G-A-A
i Eubalaena_japonica.EubJap_flattened_line_31514         I 3 C 0
s Felis_catus.KN305074.1                                       406 3 -      2052 g-a-a
i Felis_catus.KN305074.1                                 I 3 C 0
s Felis_catus_fca126.CM031415.1                           20185172 3 + 205367284 g-a-a
i Felis_catus_fca126.CM031415.1                          I 3 C 0
s Felis_nigripes.FelNig_flattened_line_125938                10286 3 -     11347 G-A-A
i Felis_nigripes.FelNig_flattened_line_125938            I 3 C 0
s Fukomys_damarensis.KN121974.1                             848299 3 +   3816255 g-g-a
i Fukomys_damarensis.KN121974.1                          I 3 C 0
s Galagoides_demidoff.k141_31856                              2990 3 -      3432 t-a-c
i Galagoides_demidoff.k141_31856                         I 4 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25230 3 +     26054 G-A-A
i Galeopterus_variegatus.GalVar_scaffold_56069           I 5 C 0
s Glis_glis.GliGli_scaffold_19807                            30137 3 +     49224 G-G-G
i Glis_glis.GliGli_scaffold_19807                        I 1 C 0
s Gorilla_beringei.k141_2022027                               1275 3 +      3305 G-A-A
i Gorilla_beringei.k141_2022027                          I 4 C 0
s Gorilla_gorilla.CYUI03002401.1                              5498 3 +      7071 g-a-a
i Gorilla_gorilla.CYUI03002401.1                         I 4 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   29865 3 +     78134 G-G-G
i Graphiurus_murinus.GraMur_scaffold_10447               I 1 C 0
s Helogale_parvula.HelPar_flattened_line_2585               230931 3 +    327341 G-A-A
i Helogale_parvula.HelPar_flattened_line_2585            I 3 C 0
s Heterocephalus_glaber.JH602082.1                        20659178 3 +  22651954 g-g-a
i Heterocephalus_glaber.JH602082.1                       I 3 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_173205                3147 3 -      3357 G-G-A
i Heterohyrax_brucei.HetBruBak_scaffold_173205           I 3 n 3
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111812 3 +    128679 G-A-A
i Hippopotamus_amphibius.HipAmp_scaffold_9076            I 3 C 0
s Hipposideros_armiger.JXIK01000431.1                       108156 3 +   1711038 g-a-a
i Hipposideros_armiger.JXIK01000431.1                    I 3 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39595 3 +     43066 G-A-A
i Hipposideros_galeritus.HipGal_scaffold_29171           I 3 C 0
s Hoolock_leuconedys.ctg274                                    429050 3 +    630532 G-A-A
i Hoolock_leuconedys.ctg274                                 I 4 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  33041 3 +     55795 G-A-A
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 3 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19633 3 -    143317 G-G-A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 3 C 0
s Hylobates_agilis.k141_307679                               11968 3 -     15490 G-A-A
i Hylobates_agilis.k141_307679                           I 4 C 0
s Hylobates_klossii.k141_282416                              53973 3 +     67168 G-A-A
i Hylobates_klossii.k141_282416                          I 4 C 0
s Hylobates_pileatus_b.LG02                                     189537420 3 - 191637585 G-A-A
i Hylobates_pileatus_b.LG02                                     I 4 C 0
s Hylobates_pileatus_a.tarseq_633                            3330518 3 -  11177569 G-A-A
i Hylobates_pileatus_a.tarseq_633                          I 4 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80722 3 +    135385 A-T-A
i Hystrix_cristata.HysCri_scaffold_5660                  I 3 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514365 3 -   7955117 g-g-a
i Ictidomys_tridecemlineatus.JH393364.1                  I 3 C 0
s Indri_indri.k141_3655594                                   17943 3 +     31101 G-A-A
i Indri_indri.k141_3655594                               I 4 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22173 3 +     23964 G-A-A
i Inia_geoffrensis.IniGeo_flattened_line_48101           I 3 C 0
s Jaculus_jaculus.JH725527.1                               8271151 3 -   9596543 t-a-a
i Jaculus_jaculus.JH725527.1                             I 3 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1440 3 -      3359 G-A-A
i Kogia_breviceps.KogBre_flattened_line_192630           I 3 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    11686 3 -     42476 G-A-A
i Lasiurus_borealis.LasBor_scaffold_32767                I 3 C 0
s Lepilemur_ankaranensis.k141_596936                          6575 3 -     23766 G-A-A
i Lepilemur_ankaranensis.k141_596936                     I 4 C 0
s Lepilemur_dorsalis.k141_577674                             24522 3 +     45836 G-A-A
i Lepilemur_dorsalis.k141_577674                         I 4 C 0
s Lepilemur_ruficaudatus.k141_420445                         31432 3 -     32627 G-A-A
i Lepilemur_ruficaudatus.k141_420445                     I 4 C 0
s Lepilemur_septentrionalis.k141_185316                      22580 3 +     54090 G-A-A
i Lepilemur_septentrionalis.k141_185316                  I 4 C 0
s Leptonychotes_weddellii.KB714746.1                       3035887 3 +   3914936 g-a-a
i Leptonychotes_weddellii.KB714746.1                     I 3 C 0
s Lepus_americanus.LepAme_scaffold_107385                     3373 3 -     14121 G-A-A
i Lepus_americanus.LepAme_scaffold_107385                I 3 C 0
s Lipotes_vexillifer.KE559953.1                             267254 3 -    662738 g-a-a
i Lipotes_vexillifer.KE559953.1                          I 3 C 0
s Lophocebus_aterrimus.ctg367                              1431236 3 +   1826925 G-A-A
i Lophocebus_aterrimus.ctg367                            I 4 C 0
s Loris_lydekkerianus.k141_2539221                             494 4 +     11245 GAG-A
i Loris_lydekkerianus.k141_2539221                       I 4 C 0
s Loris_tardigradus.ctg83                                   999329 4 +   6120653 gag-a
i Loris_tardigradus.ctg83                                I 4 C 0
s Loxodonta_africana.GL010049.1                            4214270 4 -  43346337 a-taa
i Loxodonta_africana.GL010049.1                          I 3 C 0
s Lycaon_pictus.CM007581.1                                17951504 3 -  59628241 g-a-a
i Lycaon_pictus.CM007581.1                               I 3 C 0
s Macaca_arctoides.k141_2326796                               1422 3 +     40492 G-A-A
i Macaca_arctoides.k141_2326796                          I 4 C 0
s Macaca_assamensis.Contig5                               59670682 3 +  60120075 G-A-A
i Macaca_assamensis.Contig5                              I 4 C 0
s Macaca_cyclopis.k119_18836                                  7180 3 -     26193 G-A-A
i Macaca_cyclopis.k119_18836                             I 4 C 0
s Macaca_fascicularis.k141_814140                            74970 3 -    114318 G-A-A
i Macaca_fascicularis.k141_814140                        I 4 C 0
s Macaca_fuscata.k119_255327                                   693 3 -     23192 G-A-A
i Macaca_fuscata.k119_255327                             I 4 C 0
s Macaca_leonina.k141_3550399                                10142 3 -     29190 G-A-A
i Macaca_leonina.k141_3550399                            I 4 C 0
s Macaca_maura.k141_2733130                                  18713 3 +     37952 G-A-A
i Macaca_maura.k141_2733130                              I 4 C 0
s Macaca_mulatta.NC_041758.1                             186833801 3 + 187317192 g-a-a
i Macaca_mulatta.NC_041758.1                             I 4 C 0
s Macaca_nemestrina.KQ007038.1                            25452359 3 -  25927173 g-a-a
i Macaca_nemestrina.KQ007038.1                           I 4 C 0
s Macaca_nigra.k141_1655396                                  74562 3 +     89720 G-A-A
i Macaca_nigra.k141_1655396                              I 4 C 0
s Macaca_radiata.k141_3680011                                 1559 3 +     20474 G-A-A
i Macaca_radiata.k141_3680011                            I 4 C 0
s Macaca_siberu.k141_635500                                   1360 3 -     14993 G-A-A
i Macaca_siberu.k141_635500                              I 4 C 0
s Macaca_silenus.Contig273                                  323992 3 -    668171 G-A-A
i Macaca_silenus.Contig273                               I 4 C 0
s Macaca_thibetana.k99_7456                                  15502 3 -     15935 G-A-A
i Macaca_thibetana.k99_7456                              I 4 C 0
s Macaca_tonkeana.k141_1498238                               20299 3 -     45290 G-A-A
i Macaca_tonkeana.k141_1498238                           I 4 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87348 3 +     94391 G-A-A
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 3 C 0
s Mandrillus_leucophaeus.scaffold280                      23931852 3 -  24302211 G-A-A
i Mandrillus_leucophaeus.scaffold280                     I 4 C 0
s Mandrillus_sphinx.Contig270                               346032 3 +    752769 G-A-A
i Mandrillus_sphinx.Contig270                            I 4 C 0
s Manis_javanica.JSZB01003497.1                              15391 3 +    737560 g-a-a
i Manis_javanica.JSZB01003497.1                          I 3 C 0
s Manis_pentadactyla.KN006162.1                              46780 3 -    317179 g-a-a
i Manis_pentadactyla.KN006162.1                          I 3 C 0
s Marmota_marmota.CZRN01000018.1                          33097218 3 -  40650429 g-g-a
i Marmota_marmota.CZRN01000018.1                         I 3 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6602 3 -    207569 G-A-A
i Megaderma_lyra.MegLyr_scaffold_4542                    I 3 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6019 3 +     13704 G-A-A
i Mellivora_capensis.MelCap_flattened_line_69365         I 3 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    2841 3 +     10310 G-A-A
i Mesoplodon_bidens.MesBid_scaffold_108144               I 3 C 0
s Microcebus_murinus.CM007674.1                           18283101 3 -  93316391 g-a-a
i Microcebus_murinus.CM007674.1                          I 4 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    15246 3 -    145209 G-A-A
i Microgale_talazaci.MicTal_scaffold_6613                I 3 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13206 3 -     19307 G-A-A
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 3 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1848637 3 +   8254450 g-a-a
i Miniopterus_natalensis.LDJU01000034.1                  I 3 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32506 3 +     64694 G-A-A
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 3 C 0
s Miopithecus_ogouensis.k141_534055                           3589 3 -     28506 G-A-A
i Miopithecus_ogouensis.k141_534055                      I 4 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62217 3 -     63350 G-A-A
i Mirounga_angustirostris.MirAng_flattened_line_22144    I 3 C 0
s Mirza_zaza.k141_952172                                      4462 3 -     37649 G-A-A
i Mirza_zaza.k141_952172                                 I 4 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26346 3 -    437263 G-A-A
i Monodon_monoceros.MonMon_M_scaffold_103                I 3 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137610 3 -    366855 G-A-A
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 3 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   24121 3 +     37127 G-A-A
i Mungos_mungo.MunMun_flattened_line_23663               I 3 C 0
s Murina_feae.MurFea_scaffold_85699                           4696 3 +     14753 G-A-A
i Murina_feae.MurFea_scaffold_85699                      I 3 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2132 3 +     14296 A-G-G
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 1 C 0
s Mustela_putorius.JH418006.1                               297441 3 -  14710649 G-A-A
i Mustela_putorius.JH418006.1                            I 3 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     70905 3 -     80779 G-G-A
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 3 C 0
s Myotis_brandtii.KE162005.1                                277804 3 -  10118263 G-A-A
i Myotis_brandtii.KE162005.1                             I 3 C 0
s Myotis_davidii.KB100139.1                                1585375 3 -   6019432 G-A-A
i Myotis_davidii.KB100139.1                              I 3 C 0
s Myotis_lucifugus.GL429869.1                              3901592 3 -   4330536 G-A-A
i Myotis_lucifugus.GL429869.1                            I 3 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32141 3 +     33610 G-A-A
i Myotis_myotis.MyoMyo_scaffold_28916                    I 3 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              185871 3 +    196477 G-A-A
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 3 C 0
s Nannospalax_galili.KL204047.1                            2025297 3 -   3037898 g-a-a
i Nannospalax_galili.KL204047.1                          I 1 C 0
s Nasalis_larvatus.k141_413338                                9602 3 +     21681 G-A-A
i Nasalis_larvatus.k141_413338                           I 4 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865302 3 +   7148211 g-a-a
i Neophocaena_asiaeorientalis.KZ687982.1                 I 3 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756170 3 +    783361 G-A-A
i Noctilio_leporinus.NocLep_scaffold_251                 I 3 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145765 3 -   9404916 g-a-a
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 3 C 0
s Nycticebus_bengalensis.LG01                            102574297 4 - 196305487 GAA-A
i Nycticebus_bengalensis.LG01                            I 4 C 0
s Nycticebus_coucang.k141_5327727                             1983 4 +      8486 GAA-A
i Nycticebus_coucang.k141_5327727                        I 4 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744725 4 + 199412804 gaa-a
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 4 C 0
s Odobenus_rosmarus.KB229312.1                              500506 3 -   2017862 g-a-a
i Odobenus_rosmarus.KB229312.1                           I 3 C 0
s Orcinus_orca.KB316932.1                                  2781217 3 -  10937097 g-a-a
i Orcinus_orca.KB316932.1                                I 3 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6608 3 -     18566 G-G-A
i Orycteropus_afer.OryAfe_flattened_line_144387          I 3 C 0
s Oryctolagus_cuniculus.CM000791.1                        67144215 3 + 174332312 g-a-a
i Oryctolagus_cuniculus.CM000791.1                       I 3 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458519 3 -    559221 g-a-a
i Otocyon_megalotis.JAEUCK010005147.1                    I 3 C 0
s Pan_paniscus.KQ411613.1                                    35987 3 +     80009 a-a-a
i Pan_paniscus.KQ411613.1                                I 4 I 2266
s Pan_troglodytes.CM009242.2                             189136937 3 + 189151597 g-a-a
i Pan_troglodytes.CM009242.2                             N 0 N 0
s Panthera_onca.PanOnc_flattened_line_3271                  140382 3 +    230217 G-A-A
i Panthera_onca.PanOnc_flattened_line_3271               I 3 C 0
s Panthera_pardus.KV860321.1                                251911 3 +  18783137 g-a-a
i Panthera_pardus.KV860321.1                             I 3 C 0
s Panthera_tigris.KE722367.1                               4710356 3 -   8748460 g-a-a
i Panthera_tigris.KE722367.1                             I 3 C 0
s Papio_anubis.CM001495.2                                183437176 3 + 183742232 g-a-a
i Papio_anubis.CM001495.2                                I 4 C 0
s Papio_cynocephalus.k141_4307930                             1238 3 +     20448 G-A-A
i Papio_cynocephalus.k141_4307930                        I 4 C 0
s Papio_hamadryas.Contig39                                20557860 3 +  20919399 G-A-A
i Papio_hamadryas.Contig39                               I 4 C 0
s Papio_kindae.k141_4051466                                   1438 3 -      1598 G-A-A
i Papio_kindae.k141_4051466                              I 4 C 0
s Papio_papio.k141_802527                                     3270 3 +     27711 G-A-A
i Papio_papio.k141_802527                                I 4 C 0
s Papio_ursinus.k141_3428135                                  3259 3 +      9205 G-A-A
i Papio_ursinus.k141_3428135                             I 4 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      1180 3 -     78924 G-C-A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 3 C 0
s Perodicticus_ibeanus.k141_855320                            4475 4 +     13100 GAA-A
i Perodicticus_ibeanus.k141_855320                       I 4 C 0
s Perodicticus_potto.k141_1092580                             2843 4 +     25941 GAA-A
i Perodicticus_potto.k141_1092580                        I 4 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25148 3 +     32600 G-T-A
i Perognathus_longimembris.PerPac_flattened_line_34437   I 1 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25649 3 -     29689 G-G-A
i Petromus_typicus.PetTyp_scaffold_42190                 I 3 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8264 3 +     63832 G-A-A
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 3 C 0
s Piliocolobus_badius.k141_1234363                           38119 3 +     62158 G-A-A
i Piliocolobus_badius.k141_1234363                       I 4 C 0
s Piliocolobus_gordonorum.k141_381342                        32846 3 +     89929 G-A-A
i Piliocolobus_gordonorum.k141_381342                    I 4 C 0
s Piliocolobus_kirkii.k141_448987                            34262 3 +     51399 G-A-A
i Piliocolobus_kirkii.k141_448987                        I 4 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290483 3 -  14605196 g-a-a
i Piliocolobus_tephrosceles.PDMG02000141.1               I 4 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_7723             79162 3 +     79650 G-A-A
i Pipistrellus_pipistrellus.PipPip_scaffold_7723         I 3 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           33970 3 +     35617 G-A-A
i Platanista_gangetica.PlaMin_flattened_line_32310       I 3 C 0
s Pongo_abelii.CM009266.2                                189125023 3 + 189387572 g-a-a
i Pongo_abelii.CM009266.2                                I 4 C 0
s Pongo_pygmaeus.ctg66                                     9564866 3 +   9816681 G-A-A
i Pongo_pygmaeus.ctg66                                   I 4 C 0
s Presbytis_comata.k141_677006                               67762 3 -     81375 G-A-A
i Presbytis_comata.k141_677006                           I 4 C 0
s Presbytis_mitrata.k141_2342859                              9589 3 +     10147 G-A-A
i Presbytis_mitrata.k141_2342859                         I 4 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9750 3 -     22811 G-G-A
i Procavia_capensis.ProCapCap_scaffold_85530             I 3 C 0
s Propithecus_coquerelli.NW_012148875.1                     985816 3 +   2598838 g-a-a
i Propithecus_coquerelli.NW_012148875.1                  I 4 C 0
s Propithecus_coronatus.k141_347390                          24104 3 +     38485 G-A-A
i Propithecus_coronatus.k141_347390                      I 4 C 0
s Propithecus_diadema.k141_357118                              266 3 +      4256 G-A-A
i Propithecus_diadema.k141_357118                        I 4 C 0
s Propithecus_edwardsi.k141_1176054                          21624 3 +     35766 G-A-A
i Propithecus_edwardsi.k141_1176054                      I 4 C 0
s Propithecus_perrieri.k141_1630595                          16903 3 +     17239 G-A-A
i Propithecus_perrieri.k141_1630595                      I 4 C 0
s Propithecus_tattersalli.k141_790011                        23618 3 -     67325 G-A-A
i Propithecus_tattersalli.k141_790011                    I 4 C 0
s Propithecus_verreauxi.k141_1019028                         13334 3 -     13615 G-A-A
i Propithecus_verreauxi.k141_1019028                     I 4 C 0
s Pteronotus_parnellii.KE909381.1                            10989 3 -     21811 g-a-a
i Pteronotus_parnellii.KE909381.1                        I 3 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36460 3 +     42204 G-A-A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 3 C 0
s Pteropus_alecto.KB030862.1                              22973478 2 +  28871421 G-G--
i Pteropus_alecto.KB030862.1                             I 3 C 0
s Pteropus_vampyrus.KN534172.1                                1414 3 -      8028 g-a-a
i Pteropus_vampyrus.KN534172.1                           I 3 C 0
s Puma_concolor.QAVW01001104.1                            20262891 3 -  38429054 g-a-a
i Puma_concolor.QAVW01001104.1                           I 3 C 0
s Pygathrix_cinerea.k141_1153803                              9591 3 -     91421 G-A-A
i Pygathrix_cinerea.k141_1153803                         I 4 C 0
s Pygathrix_nigripes_b.ctg100                                 7603725 3 +   7812017 G-A-A
i Pygathrix_nigripes_b.ctg100                               I 4 C 0
s Pygathrix_nigripes_a.k141_215492                              9564 3 -     72585 G-A-A
i Pygathrix_nigripes_a.k141_215492                         I 4 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        366703 3 -   3329780 g-a-a
i Rhinolophus_sinicus.LVEH01000134.1                     I 3 C 0
s Rhinopithecus_bieti.k119_217274                              977 3 -     11128 G-A-A
i Rhinopithecus_bieti.k119_217274                        I 4 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230354 3 - 195417433 g-a-a
i Rhinopithecus_roxellana.NC_044550.1                    I 4 C 0
s Rhinopithecus_strykeri.ctg102                            7666062 3 +   7961872 G-A-A
i Rhinopithecus_strykeri.ctg102                          I 4 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84462 3 -     96226 G-A-A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 3 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151176 3 -    313613 G-A-A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 8 I 16
s Semnopithecus_entellus.k141_11662                          14106 3 -     19888 G-A-A
i Semnopithecus_entellus.k141_11662                      I 4 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21311 3 +     39453 G-A-A
i Semnopithecus_hypoleucos.k141_1615806                  I 4 C 0
s Semnopithecus_johnii.k141_670120                            1835 3 +     27826 G-A-A
i Semnopithecus_johnii.k141_670120                       I 4 C 0
s Semnopithecus_priam.k141_638794                             1357 3 -     19483 G-A-A
i Semnopithecus_priam.k141_638794                        I 4 C 0
s Semnopithecus_schistaceus.k141_1584426                      1419 3 +      7198 G-A-A
i Semnopithecus_schistaceus.k141_1584426                 I 4 C 0
s Semnopithecus_vetulus.k141_1200928                          9679 3 +     15514 G-A-A
i Semnopithecus_vetulus.k141_1200928                     I 4 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187480 3 -    191337 G-A-A
i Solenodon_paradoxus.SolPar_flattened_line_5840         I 3 C 0
s Spermophilus_dauricus.KZ294078.1                         1948008 3 -   3870691 g-g-a
i Spermophilus_dauricus.KZ294078.1                       I 3 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27003 3 +     97271 G-A-A
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 3 C 0
s Suricata_suricatta.SurSur_flattened_line_6629               6958 3 -    196729 A-A-A
i Suricata_suricatta.SurSur_flattened_line_6629          I 3 C 0
s Sus_scrofa.CM000828.4                                   62882258 3 -  69701581 g-a-a
i Sus_scrofa.CM000828.4                                  I 3 C 0
s Symphalangus_syndactylus.tarseq_199                      1087655 3 -   1523678 G-A-A
i Symphalangus_syndactylus.tarseq_199                    I 4 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6607 3 +     41958 G-A-A
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 3 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69235 3 +    116680 G-A-A
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 3 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      114982 3 -    156842 G-A-A
i Tapirus_indicus.TapInd_scaffold_9301                   I 3 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383434 3 +    539355 G-A-A
i Tapirus_terrestris.TapTer_scaffold_755                 I 3 C 0
s Tarsius_lariang.k141_2201908                               10430 3 +     70052 G-A-A
i Tarsius_lariang.k141_2201908                           I 14 C 0
s Tarsius_wallacei.k141_780063                               14735 3 +     25099 G-A-A
i Tarsius_wallacei.k141_780063                           I 14 C 0
s Theropithecus_gelada.CM009954.1                        186422685 3 + 186847797 g-a-a
i Theropithecus_gelada.CM009954.1                        I 4 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              102989 3 +    114563 G-G-A
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 3 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   1641 3 +      8208 G-A-A
i Tolypeutes_matacus.TolMat_scaffold_228639              I 3 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78751 3 +    610378 G-A-A
i Tonatia_saurophila.TonSau_scaffold_294                 I 3 C 0
s Trachypithecus_auratus.k141_722599                          5416 3 -     20410 G-A-A
i Trachypithecus_auratus.k141_722599                     I 4 C 0
s Trachypithecus_crepusculus.k141_1194022                     9608 3 +     15221 G-A-A
i Trachypithecus_crepusculus.k141_1194022                I 4 C 0
s Trachypithecus_cristatus.k141_580354                        5516 3 +     19930 G-A-A
i Trachypithecus_cristatus.k141_580354                   I 4 C 0
s Trachypithecus_francoisi.k141_1412647                       1943 3 -     19997 G-A-A
i Trachypithecus_francoisi.k141_1412647                  I 4 C 0
s Trachypithecus_geei.k141_277701                            42062 3 -     60166 G-A-A
i Trachypithecus_geei.k141_277701                        I 4 C 0
s Trachypithecus_germaini.k141_912491                         9534 3 -     27529 G-A-A
i Trachypithecus_germaini.k141_912491                    I 4 C 0
s Trachypithecus_hatinhensis.k141_143409                      9474 3 -     18194 G-A-A
i Trachypithecus_hatinhensis.k141_143409                 I 4 C 0
s Trachypithecus_laotum.k141_907409                           3210 3 -     21137 G-A-A
i Trachypithecus_laotum.k141_907409                      I 4 C 0
s Trachypithecus_leucocephalus.k141_587342                    1912 3 -     10723 G-A-A
i Trachypithecus_leucocephalus.k141_587342               I 4 C 0
s Trachypithecus_melamera.k141_434728                         1065 3 +      9834 G-A-A
i Trachypithecus_melamera.k141_434728                    I 4 C 0
s Trachypithecus_obscurus.k141_190785                        19383 3 +     32220 G-A-A
i Trachypithecus_obscurus.k141_190785                    I 7 C 0
s Trachypithecus_phayrei.ctg124                            5933480 3 +   6242583 G-A-A
i Trachypithecus_phayrei.ctg124                          I 4 C 0
s Trachypithecus_pileatus.k141_2007326                        2725 3 +     20839 G-A-A
i Trachypithecus_pileatus.k141_2007326                   I 4 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    259 3 -      1748 G-G-A
i Tragulus_javanicus.TraJav_scaffold_140459              I 3 C 0
s Tupaia_chinensis.KB320699.1                              2149365 3 +   4065304 g-a-a
i Tupaia_chinensis.KB320699.1                            I 3 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     2984 3 -     10553 G-A-A
i Tupaia_tana.TupTan_flattened_line_97126                I 3 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737464 3 +  33153633 g-a-a
i Tursiops_truncatus.MRVK01000835.1                      I 3 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   51308 3 -     77625 G-A-A
i Uropsilus_gracilis.UroGra_scaffold_12083               I 9 I 3
s Ursus_maritimus.KK499267.1                               4846702 3 -   5085361 g-a-a
i Ursus_maritimus.KK499267.1                             I 3 C 0
s Vicugna_pacos.KN270157.1                                 5368165 3 -   5488506 g-a-a
i Vicugna_pacos.KN270157.1                               I 3 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7180 3 -     43706 g-a-a
i Vulpes_lagopus.VulLag_flattened_line_30954             I 3 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19502 3 -     24430 A-G-A
i Xerus_inauris.XerIna_scaffold_48378                    I 3 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1627 3 +      2932 G-A-A
i Zalophus_californianus.ZalCal_flattened_line_63728     I 3 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9786 3 +     63895 G-A-A
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 3 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11156 3 +     12536 G-A-A
i Ziphius_cavirostris.ZipCav_flattened_line_71469        I 3 C 0
e Varecia_variegata.k141_1128296                              7155 0 +     24756 C
e Varecia_rubra.k141_590885                                   7107 0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sorex_araneus.JH798187.1                                13646843 1 -  18376816 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Saiga_tatarica.SaiTat_scaffold_373180                       3225 222 +      4321 I
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4576 218 +     55207 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414 0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1264036 222 -   2937107 I
e Ovis_canadensis.OviCan_scaffold_2572                      173103 222 -    191736 I
e Ovis_aries.CM001607.2                                   17584682 222 +  44047080 I
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144328 218 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1355292 2 +   3988456 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Moschus_moschiferus.MosMos_scaffold_61429                  27091 222 -     27816 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lemur_catta.scaffold_24                                 15519761 0 -  30322482 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17151 222 +     36099 I
e Hapalemur_occidentalis.k141_907772                          9234 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402 0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298 0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517 0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                               9432 0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267 0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247 0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321 0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369 0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369 0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184 0 -     25546 C
e Eulemur_collaris.k141_377015                                2154 0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453 0 -     14127 C
e Erinaceus_europaeus.JH835339.1                           3320548 4609 -   7059049 I
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       309953 220 +    607251 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Crocidura_indochinensis.CroInd_scaffold_287352               199 1 +      4208 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capra_hircus.CM004588.1                                 18059667 222 -  44709034 I
e Capra_aegagrus.CM003241.1                               18828947 222 +  46296322 I
e Bubalus_bubalis.KI419123.1                               2818124 220 +   4408762 I
e Bos_taurus.CM000203.6                                   18082634 220 +  45695690 I
e Bos_mutus.JH880303.1                                     1124552 224 -   1948126 I
e Bos_indicus.CM003047.1                                  20271996 220 +  48749331 I
e Bison_bison.KN261452.1                                    198791 220 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    25751 222 +     34529 I
e Antilocapra_americana.AntAmePen_scaffold_12469             97280 223 -    100397 I
e Ammotragus_lervia.NIVO01071767.1                          674829 222 -   2318259 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                        626 11 +     62944 A-------------A----TAGTAC-------CTG
s Acinonyx_jubatus.LLWD01001279.1                           816745 11 -   1699592 a-------------a----caatac-------TTG
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506704 11 -  29979442 a-------------a----gaatac-------cTG
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             74995 11 -    347723 a-------------a----caataC-------TTA
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64787 11 -     89534 A-------------G----TAATTT-------CTA
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9101 11 -     52922 A-------------A----TAGTAC-------TTG
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9026 11 -     28001 A-------------A----TAGTAC-------TTG
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9152 11 -      9772 A-------------A----TAGTAC-------TTG
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            309 11 -     12518 A-------------A----TAGTAC-------TTG
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      182897 11 +    412891 A-------------A----TAATTC-------CTG
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 13
s Aplodontia_rufa.AprRuf_scaffold_68852                       7069 11 +     20879 A-------------A----CAATTG-------TTT
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14246 11 +     17124 A-------------A----AAATGC-------TTG
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2249 11 +     43469 A-------------A----TAATTC-------CTG
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 13
s Avahi_laniger.k141_765380                                  49089 11 -     92717 A-------------A----CAATAT-------TTG
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              49714 11 +     85213 A-------------A----CAATAT-------TTG
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191323 11 +  23207421 a-------------a----caatac-------TTG
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         1789 11 -     18090 a-------------a----caatac-------TTG
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998679 11 -  17673402 a-------------a----caatac-------TTG
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331143 11 -   7040546 a-------------a----caatac-------TTG
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399419 11 -   1652518 a-------------a----caatac-------TTG
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795559 11 -  60362399 A-------------A----CAATAC-------TTG
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181616 11 -    185531 A-------------A----CAATAC-------TTG
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031003 11 -   9314153 a-------------a----caatAC-------TTG
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955267 11 -  59632846 a-------------a----caatAC-------TTG
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496571 11 +  63665305 a-------------a----caatAC-------TTG
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                     721 11 -     12242 A-------------A----CAATTC-------TTA
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           140818 11 -    496798 a-------------a----caatat-------ttg
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2667 11 -     11696 A-------------A----TAATTC-------CTG
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 13
s Castor_canadensis.CasCan_scaffold_2074                    133434 11 +    179628 A-------------A----TAATTC-------ATA
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89001 11 +    217609 A-------------A----CAATAC-------TTG
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18347257 11 -  23392119 A-------------A----CAATTC-------TTA
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18359517 11 -  23407841 A-------------A----CAATTC-------TTA
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98392 11 +    143979 A-------------A----CAATTC-------TTA
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         4734 11 -      8605 A-------------A----CAATAT-------TTG
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227653 10 +  27778364 --------------a----caatAC-------TTA
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2371 10 -      3715 --------------A----CAATAC-------TTA
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470070 11 +   4669795 a-------------a----tagtaC-------TTG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8619 11 -     19203 A-------------A----TAGTAC-------TTG
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3038 11 +      8260 A-------------A----TAGTAC-------TTG
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3268 11 +     27781 A-------------A----TAGTAC-------TTG
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3414 11 -     20310 A-------------A----TAGTAC-------TTG
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6398 11 +     29689 A-------------A----TAGTAC-------TTG
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             751 11 +      9989 A-------------A----TAGTAC-------TTC
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9086 11 -     27936 A-------------A----TAGTAC-------TTC
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9105 11 -     11289 A-------------A----TAGTAC-------TTG
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811481 11 +  39242232 A-------------A----TAGTAC-------TTG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217172 11 -  21565898 A-------------A----TAGTAC-------TTG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34292 11 -     53127 A-------------A----TAGTAC-------TTG
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1584 11 +      7159 A-------------A----TAGTAC-------TTG
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9097 11 -     27947 A-------------A----TAGTAC-------TTG
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9073 11 +     17596 A-------------A----TAGTAC-------TTG
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39567 11 -     41420 A-------------A----TAGTAC-------TTG
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4588 17 -      6351 AACAAAA-------A----CGAATC-------TTG
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16504 11 -     52598 A-------------A----CAATAT-------TTG
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           11853 11 +     57038 A-------------A----CAATAT-------TTG
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1248287 11 +   2543920 a-------------a----caattc-------tTA
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18423036 11 -  18827391 A-------------A----TAGTAG-------TTG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9479 11 -     50209 A-------------A----TAGTAC-------TTG
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416484 11 + 135778131 a-------------a----tagtaC-------TTG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 14914 24 +     19366 AACAAAATCTGAAAA----CAATTT-------TTG
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170009 28 +    839153 aacaaaatctgaaaacaaacaattt-------ttg
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_172426               9023 11 -     10935 A-------------T----CAATTC-------TTG
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          C 0 C 0
s Colobus_angolensis.KN981557.1                            1905004 11 +   2368649 a-------------a----tagtaC-------TTG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944622 11 + 200372422 A-------------A----TAGTAC-------TTG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31516 11 +     84244 A-------------A----TAGTAC-------TTG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545769  8 -  53390261 g-------------a----t---ct-------tTG
i Condylura_cristata.JH655891.1                          I 3 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10284 11 -     20389 A-------------A----CAATAC-------CAG
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_287352               200  8 +      4208 A-------------A----T---AC-------TTG
i Crocidura_indochinensis.CroInd_scaffold_287352         I 1 I 5
s Cryptoprocta_ferox.CryFer_flattened_line_16129             17763 11 -     87169 A-------------A----CAATAC-------TTG
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 14
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35422 11 +     51376 A-------------G----GAATTC-------TTA
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2633 11 +      5455 A-------------A----CAATTC-------TTA
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1024 11 +      3576 A-------------A----CAATTC-------TTA
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            60834 17 +   2246927 aacaaaA-------G----CATATC-------TTG
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532684 11 -  12879189 A-------------A----CAATAT-------TTG
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16810959 11 +  35494412 a-------------a----caatgC-------TTG
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8627698 11 +  20541912 C-------------A----TAATTC-------CTG
i Desmodus_rotundus.KZ672289.1                           C 0 I 13
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669186 10 +   1390856 --------------a----caatAC-------TTA
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2261 10 +    198055 --------------A----CAATAC-------TTA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34083 11 +     67921 A-------------A----CAATTC-------TTA
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18895593 11 +  37912305 A-------------A----TAATTC-------ATA
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  11803 11 +     14536 A-------------A----TAATTC-------ATA
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31278 11 -     42551 A-------------A----CAATTC-------TTA
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE759718.1                                   7208 11 +     11740 a-------------a----caATAC-------CTG
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1088787 11 +  10337057 A-------------T----CAATTC-------TTG
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16325557 11 -  41312741 a-------------a----caatac-------TTA
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2143550 11 -  14770903 A-------------G----TAATAC-------CTG
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279528 11 +   4378816 a-------------a----caatAC-------ATG
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527349 11 -  39960074 a-------------a----caatAC-------ATG
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29364 11 +    498745 a-------------a----caatAC-------ATG
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21199715 11 -  21539334 A-------------A----TAGTAC-------TTG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10635 11 +    133382 A-------------A----CAATAC-------TTG
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24573 11 -     44125 A-------------A----CAATAC-------TTG
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.KN305074.1                                       409 11 -      2052 a-------------a----caatac-------TTG
i Felis_catus.KN305074.1                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20185175 11 + 205367284 a-------------a----caatac-------TTG
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_125938                10289 11 -     11347 A-------------A----CAATAC-------TTG
i Felis_nigripes.FelNig_flattened_line_125938            C 0 C 0
s Fukomys_damarensis.KN121974.1                             848302 11 +   3816255 a-------------a----caattc-------TTC
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galagoides_demidoff.k141_31856                              2993 18 -      3432 a-------------c----aaaggcatagaagtta
i Galagoides_demidoff.k141_31856                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25233 11 +     26054 A-------------A----CAATAC-------CTG
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30140 11 +     49224 A-------------A----TGATTG-------TTG
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_2022027                               1278 11 +      3305 A-------------A----TAGTAC-------CTG
i Gorilla_beringei.k141_2022027                          C 0 C 0
s Gorilla_gorilla.CYUI03002401.1                              5501 11 +      7071 a-------------a----tagtaC-------CTG
i Gorilla_gorilla.CYUI03002401.1                         C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   29868 11 +     78134 A-------------A----TGATTG-------CTG
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               230934 11 +    327341 A-------------A----CAATAC-------TTG
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 14
s Heterocephalus_glaber.JH602082.1                        20659181 11 +  22651954 a-------------a----caattc-------TTA
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_177355                3003 11 -      3210 A-------------A----CTGTTC-------TTG
i Heterohyrax_brucei.HetBruBak_scaffold_177355           I 299 N 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111815 11 +    128679 A-------------A----CAATAC-------TTG
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108159 11 +   1711038 a-------------a----caatac-------CTG
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39598 11 +     43066 A-------------A----CAATAC-------CTG
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    429053 11 +    630532 A-------------A----TAGTAC-------TTG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  33044 11 +     55795 A-------------A----CAATAC-------TTG
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 14
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19636 11 -    143317 A-------------A----CAATTC-------TTA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_307679                               11971 11 -     15490 A-------------A----TAGTAC-------TTG
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              53976 11 +     67168 A-------------A----TAGTAC-------TTG
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189537423 11 - 191637585 A-------------A----TAGTAC-------TTG
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3330521 11 -  11177569 A-------------A----TAGTAC-------TTG
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80725 11 +    135385 A-------------A----CAATTC-------CTA
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 7
s Ictidomys_tridecemlineatus.JH393364.1                    7514368 11 -   7955117 a-------------a----tgcttG-------TTG
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   17946 11 +     31101 A-------------A----CAATAT-------TTG
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22176 11 +     23964 A-------------A----CAATAC-------TTG
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271154 11 -   9596543 a-------------a----taattt-------cta
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1443 11 -      3359 A-------------A----CAATAT-------TTG
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    11689 11 -     42476 A-------------G----TAATAC-------CTG
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 15
s Lepilemur_ankaranensis.k141_596936                          6578 11 -     23766 A-------------A----CAATAT-------TTT
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24525 11 +     45836 A-------------A----CAATAT-------TTT
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31435 11 -     32627 A-------------A----CAATAT-------TTT
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      22583 11 +     54090 A-------------A----CAATAT-------TTT
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3035890 11 +   3914936 a-------------a----caatac-------tta
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     3376 11 -     14121 A-------------A----CAATCC-------TTA
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             267257 11 -    662738 a-------------a----caataC-------GTG
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1431239 11 +   1826925 A-------------A----TAGTAC-------TTG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             498 11 +     11245 A-------------G----AAATGC-------TTG
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999333 11 +   6120653 a-------------G----AAATGC-------TTG
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214274 11 -  43346337 a-------------a----tgattc-------TTG
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951507 11 -  59628241 a-------------a----caataC-------TTG
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               1425 11 +     40492 A-------------A----TAGTAC-------TTG
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670685 11 +  60120075 A-------------A----TAGTAC-------TTG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7183 11 -     26193 A-------------A----TAGTAC-------TTG
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            74973 11 -    114318 A-------------A----TAGTAC-------TTG
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   696 11 -     23192 A-------------A----TAGTAC-------TTG
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10145 11 -     29190 A-------------A----TAGTAC-------TTG
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18716 11 +     37952 A-------------A----TAGTAC-------TTG
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833804 11 + 187317192 a-------------a----tagtaC-------TTG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452362 11 -  25927173 a-------------a----tagtaC-------TTG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74565 11 +     89720 A-------------A----TAGTAC-------TTG
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1562 11 +     20474 A-------------A----TAGTAC-------TTG
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1363 11 -     14993 A-------------A----TAGTAC-------TTG
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  323995 11 -    668171 A-------------A----TAGTAC-------TTG
i Macaca_silenus.Contig273                               C 0 I 237
s Macaca_thibetana.k99_7456                                  15505 11 -     15935 A-------------A----TAGTAC-------TTG
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20302 11 -     45290 A-------------A----TAGTAC-------TTG
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87351 11 +     94391 A-------------A----CAATAC-------CTG
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23931855 11 -  24302211 A-------------A----TAGTAC-------TTG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346035 11 +    752769 A-------------A----TAGTAC-------TTG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15394 11 +    737560 a-------------a----caataC-------CTG
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              46783 11 -    317179 a-------------a----caataC-------CTG
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097221 11 -  40650429 a-------------a----tgctTG-------TTG
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6605 11 -    207569 A-------------G----CAATAC-------CTG
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6022 11 +     13704 A-------------A----CAATAC-------TTA
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    2844 11 +     10310 A-------------A----CAATAC-------TTG
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18283104 11 -  93316391 a-------------a----caataC-------TTG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    15249 11 -    145209 A-------------A----TAATCC-------TTG
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13209 11 -     19307 A-------------A----TAATTC-------CTG
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 13
s Miniopterus_natalensis.LDJU01000034.1                    1848640 11 +   8254450 a-------------a----taatac-------cTG
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32509 11 +     64694 A-------------A----TAATAC-------CTG
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3592 11 -     28506 A-------------A----TAGTAC-------TTG
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62220 11 -     63350 A-------------A----CAATAC-------TTA
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      4465 11 -     37649 A-------------A----CAATAT-------TTG
i Mirza_zaza.k141_952172                                 C 0 I 10
s Monodon_monoceros.MonMon_M_scaffold_103                    26349 11 -    437263 A-------------A----CAATGC-------TTG
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137613 11 -    366855 A-------------A----TAATTC-------CTG
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   24124 11 +     37127 A-------------A----CAATAC-------TTG
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 14
s Murina_feae.MurFea_scaffold_85699                           4699 11 +     14753 A-------------G----CAATAC-------CTG
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2135 11 +     14296 A-------------A----TGCTTG-------TTG
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               297444 11 -  14710649 A-------------A----CGATAC-------TTA
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     70908 11 -     80779 A-------------A----CAACTC-------TCA
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                277807 11 -  10118263 A-------------G----TAATAC-------CTG
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585378 11 -   6019432 A-------------G----TAATAC-------CTG
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3901595 11 -   4330536 A-------------G----TAATAC-------CTG
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32144 11 +     33610 A-------------G----TAATAC-------CTG
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              185874 16 +    196477 AACAAA--------A----CAATTC-------TTG
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025300 11 -   3037898 a-------------a----taattc-------ata
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                                9605 11 +     21681 A-------------A----TAGTAC-------TTG
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865305 11 +   7148211 a-------------a----caatac-------TTG
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756173 11 +    783361 A-------------A----TAATTT-------CTG
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145768 11 -   9404916 a-------------a----caataC-------TTG
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102574301 11 - 196305487 A-------------G----AAATGC-------TTG
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             1987 11 +      8486 A-------------G----AAATGC-------TTG
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744729 11 + 199412804 a-------------g----aaaTGC-------TTG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                              500509 11 -   2017862 a-------------a----caatac-------TTA
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Orcinus_orca.KB316932.1                                  2781220 11 -  10937097 a-------------a----caatac-------TTG
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6611 11 -     18566 A-------------G----CAATTC-------TTG
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67144218 11 + 174332312 a-------------a----caatcc-------tta
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458522 11 -    559221 a-------------a----caataC-------TTG
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Pan_paniscus.KQ411613.1                                    38256 11 +     80009 A-------------A----TAGTAC-------CTG
i Pan_paniscus.KQ411613.1                                I 2266 T 2268
s Pan_troglodytes.CM009242.2                             187569980 11 + 189151597 a-------------a----tagtac-------CTG
i Pan_troglodytes.CM009242.2                             N 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  140385 11 +    230217 A-------------A----CAATAC-------TTG
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                251914 11 +  18783137 a-------------a----caatac-------TTG
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4710359 11 -   8748460 a-------------a----caatac-------TTG
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183437179 11 + 183742232 a-------------a----tagtaC-------TTG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1241 11 +     20448 A-------------A----TAGTAC-------TTG
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20557863 11 +  20919399 A-------------A----TAGTAC-------TTG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_4051466                                   1441 11 -      1598 A-------------A----TAGTAC-------TTG
i Papio_kindae.k141_4051466                              C 0 C 0
s Papio_papio.k141_802527                                     3273 11 +     27711 A-------------A----TAGTAC-------TTG
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  3262 11 +      9205 A-------------A----TAGTAC-------TTG
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      1183 11 -     78924 A-------------A----CAATAC-------TTG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            4479 11 +     13100 A-------------A----AAATGC-------TTG
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             2847 11 +     25941 A-------------A----AAATGC-------TTG
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25151 11 +     32600 A-------------A----TAACTC-------ATA
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25652 11 -     29689 A-------------A----CAATCC-------TTG
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8267 11 +     63832 A-------------A----CAATAC-------TTG
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38122 11 +     62158 A-------------A----TAGTAC-------TTG
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        32849 11 +     89929 A-------------A----TAGTAC-------TTG
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34265 11 +     51399 A-------------A----TAGTAC-------TTG
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290486 11 -  14605196 a-------------a----tagtaC-------TTG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_7723             79165 11 +     79650 A-------------G----TAATAC-------TTG
i Pipistrellus_pipistrellus.PipPip_scaffold_7723         C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           33973 11 +     35617 A-------------A----CAATAC-------TTG
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189125026 11 + 189387572 a-------------a----tagtaC-------TTG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9564869 11 +   9816681 A-------------A----TAGTAC-------TTG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               67765 11 -     81375 A-------------A----TAGTAC-------TTG
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9592 11 +     10147 A-------------A----TAGTAC-------TTG
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9753 11 -     22811 A-------------A----CTGTTC-------TTG
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     985819 11 +   2598838 a-------------a----caataT-------TTG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          24107 11 +     38485 A-------------A----CAATAT-------TTG
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                              269 11 +      4256 A-------------A----CAATAT-------TTG
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          21627 11 +     35766 A-------------A----CAATAT-------TCG
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1630595                          16906 11 +     17239 A-------------A----CAATAT-------TTG
i Propithecus_perrieri.k141_1630595                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        23621 11 -     67325 A-------------A----CAATAT-------TTG
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_1019028                         13337 11 -     13615 A-------------A----CAATAT-------TTG
i Propithecus_verreauxi.k141_1019028                     C 0 C 0
s Pteronotus_parnellii.KE909381.1                            10992 11 -     21811 a-------------a----taagtc-------CTG
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36463 11 +     42204 A-------------A----CAATAC-------TTA
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973480 11 +  28871421 A-------------A----CAACTC-------TTG
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1417 11 -      8028 a-------------a----caactC-------TTG
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20262894 11 -  38429054 a-------------a----caatac-------TTG
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                              9594 11 -     91421 A-------------A----TAGTAC-------TTG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603728 11 +   7812017 A-------------A----TAGTAC-------TTG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9567 11 -     72585 A-------------A----TAGTAC-------TTG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        366706 11 -   3329780 a-------------a----caatac-------CTG
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                              980 11 -     11128 A-------------A----TAGTAC-------TTG
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230357 11 - 195417433 a-------------a----tagtaC-------TTG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7666065 11 +   7961872 A-------------A----TAGTAC-------TTG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84465 11 -     96226 A-------------A----TAATAC-------CTG
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151195  8 -    313613 A-------------A----T---AT-------TTG
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 16 C 0
s Semnopithecus_entellus.k141_11662                          14109 11 -     19888 A-------------A----TAGTAC-------TTG
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21314 11 +     39453 A-------------A----GAGTAC-------TTG
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            1838 11 +     27826 A-------------A----GAGTAC-------TTG
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1360 11 -     19483 A-------------A----GAGTAC-------TTG
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1422 11 +      7198 A-------------A----TAGTAC-------TTG
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9682 11 +     15514 A-------------A----GAGTAC-------TTG
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187483  8 -    191337 A-------------A----T---AT-------TTG
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13646844  8 -  18376816 A-------------G----T---at-------gta
i Sorex_araneus.JH798187.1                               I 1 I 11
s Spermophilus_dauricus.KZ294078.1                         1948011 11 -   3870691 a-------------a----tgctTG-------TTG
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27006 11 +     97271 A-------------A----CAATAC-------TTC
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629               6961 11 -    196729 A-------------A----CATTAC-------TTG
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 14
s Sus_scrofa.CM000828.4                                   62882261 11 -  69701581 a-------------a----caatgc-------TTA
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1087658 11 -   1523678 A-------------A----TAGTAC-------TTG
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6610 11 +     41958 A-------------A----TAATAC-------CTG
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69238 16 +    116680 AACAAA--------A----CAATTC-------TTG
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      114985 10 -    156842 A-------------A----TAATAC-------TT-
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383437 11 +    539355 A-------------A----TAATAC-------TTC
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10433 11 +     70052 A-------------A----CAATAT-------TTG
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               14738 11 +     25099 A-------------A----CAATAT-------TTG
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422688 11 + 186847797 a-------------a----tagtaC-------TTG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              102992 11 +    114563 A-------------G----CAATTC-------TTG
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   1644 17 +      8208 AACAAAA-------A----CGAATC-------TTG
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78754 11 +    610378 A-------------A----TAATTC-------CTG
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 13
s Trachypithecus_auratus.k141_722599                          5419 11 -     20410 A-------------A----TAGTAC-------TTG
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9611 11 +     15221 A-------------A----TAGTAC-------TTG
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5519 11 +     19930 A-------------A----TAGTAC-------TTG
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       1946 11 -     19997 A-------------A----TAGTAC-------TTG
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42065 11 -     60166 A-------------A----TAGTAC-------TTG
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9537 11 -     27529 A-------------A----TAGTAC-------TTG
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9477 11 -     18194 A-------------A----TAGTAC-------TTG
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3213 11 -     21137 A-------------A----TAGTAC-------TTG
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    1915 11 -     10723 A-------------A----TAGTAC-------TTG
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1068 11 +      9834 A-------------A----TAGTAC-------TTG
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19386 11 +     32220 A-------------A----TAGTAC-------TTG
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933483 11 +   6242583 A-------------A----TAGTAC-------TTG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2728 11 +     20839 A-------------A----TAGTAC-------TTG
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    262 10 -      1748 A-------------A-----AATAC-------TTG
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 C 0
s Tupaia_chinensis.KB320699.1                              2149368 11 +   4065304 a-------------a----caatac-------TTA
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     2987 11 -     10553 A-------------A----CCATAC-------TTA
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737467 11 +  33153633 a-------------a----caatac-------TTG
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   51314  8 -     77625 A-------------A----T---AT-------TAG
i Uropsilus_gracilis.UroGra_scaffold_12083               I 3 C 0
s Ursus_maritimus.KK499267.1                               4846705 11 -   5085361 a-------------a----gaatac-------ctg
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368168 11 -   5488506 a-------------a----caatac-------TTG
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7183 11 -     43706 a-------------a----caatac-------ttg
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19505 11 -     24430 A-------------A----TGATTG-------TCA
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1630 11 +      2932 A-------------A----CAATAC-------TTA
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9789 10 +     63895 A-------------A----TAATTT-------C-A
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11159 11 +     12536 A-------------A----CAATAC-------TTG
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Saiga_tatarica.SaiTat_scaffold_373180                       3225 222 +      4321 I
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4576 218 +     55207 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1264036 222 -   2937107 I
e Ovis_canadensis.OviCan_scaffold_2572                      173103 222 -    191736 I
e Ovis_aries.CM001607.2                                   17584682 222 +  44047080 I
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144328 218 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1355292  2 +   3988456 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Moschus_moschiferus.MosMos_scaffold_61429                  27091 222 -     27816 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17151 222 +     36099 I
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Erinaceus_europaeus.JH835339.1                           3320548 4609 -   7059049 I
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       309953 220 +    607251 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capra_hircus.CM004588.1                                 18059667 222 -  44709034 I
e Capra_aegagrus.CM003241.1                               18828947 222 +  46296322 I
e Bubalus_bubalis.KI419123.1                               2818124 220 +   4408762 I
e Bos_taurus.CM000203.6                                   18082634 220 +  45695690 I
e Bos_mutus.JH880303.1                                     1124552 224 -   1948126 I
e Bos_indicus.CM003047.1                                  20271996 220 +  48749331 I
e Bison_bison.KN261452.1                                    198791 220 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    25751 222 +     34529 I
e Antilocapra_americana.AntAmePen_scaffold_12469             97280 223 -    100397 I
e Ammotragus_lervia.NIVO01071767.1                          674829 222 -   2318259 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                        637 38 +     62944 ACGAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
s Acinonyx_jubatus.LLWD01001279.1                           816756 44 -   1699592 ACAAAC-----TTCTGGAA-G-A-AAGT-GAA-A-CACATA----TCGCCTG-A-A----A--------------A----T---A---A--
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506715 46 -  29979442 ACAAAC-----TTCTGGAAAA-A-ATGT-GAA-AGCACATA----TCACCTG-A-A----A--------------A----T---A---A--
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             75006 45 -    347723 ACAAAT-----TTCTGGAA-A-A-AGGT-GAA-AGCACATA----TCACCT-TA-A----A--------------A----T---A---A--
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64798 38 -     89534 ACAAAC-----TTC----A-A-A-ATTT-TAA-A-GTC-TGTA-ATTACCT--G-T----G--------------A---------------
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 2
s Allenopithecus_nigroviridis.k141_3361533                    9112 38 -     52922 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------TCCTC--A-T----G--------------A----A---A---AAT
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9037 38 -     28001 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9163 38 -      9772 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            320 38 -     12518 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      182921 30 +    412891 ----------------------A-ATCT-GAA-AGCACATA----TTGCCAG-A-A----A--------------A----T---A---A--
i Anoura_caudifer.AnoCau_scaffold_1412                   I 13 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7080 44 +     20879 ACAAAC-----TTC----A-A-A-ATTT-GAA-AGCACATA----TTACAT--G-GAGGAA--------------A----A---A---A--
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14257 46 +     17124 ACTAAC-----TTCTGATA-A-A-ATTC-CAA-AACACATA----TCACCT--G-A----A--------------A----A---A---AAT
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2273 30 +     43469 ----------------------A-ATCT-GAA-AGCACATA----TTGCCAG-A-A----A--------------A----T---A---A--
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 13 C 0
s Avahi_laniger.k141_765380                                  49100 37 -     92717 ACTAAC-----TTCTGGTA-A-A-ATTT-GAA-AGCACATA----TCACCT----------------------------------------
i Avahi_laniger.k141_765380                              C 0 I 8
s Avahi_peyrierasi.k141_1424874                              49725 37 +     85213 ACTAAC-----TTCTGGTA-A-A-ATTT-GAA-AGCACATA----TCACCT----------------------------------------
i Avahi_peyrierasi.k141_1424874                          C 0 I 8
s Balaenoptera_acutorostrata.KI537508.1                   15191334 45 +  23207421 ACACAC-----TTCTGGCA-A-A-ATTC-AAA-ATCACA----TGTTACCTG-A-A----A--------------A----T---A---A--
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         1800 45 -     18090 ACACAC-----TTCTGGCA-A-A-ATTC-AAA-ATCACA----TGTTACCTG-A-A----A--------------A----T---A---A--
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998690 45 -  17673402 ACACAG-----TTCTGGCA-A-A-ATTT-GAA-AGCACATA----TTACCTG-A-A----A--------------A----T---A---a--
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331154 45 -   7040546 ACACAG-----TTCTGGCA-A-A-ATTT-GAA-AGCACATA----TTACCTG-A-A----A--------------A----T---A---a--
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399430 45 -   1652518 ACACAG-----TTCTGGCA-A-A-ATTT-GAA-AGCACATA----TTACCTG-A-A----A--------------A----T---A---a--
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795570 45 -  60362399 ACAAAC-----TTCTGGAA-A-A-ATAC-GAA-AGCAC-C-TAC--CACCTG-A-A----A--------------A----T---C---A--
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181627 45 -    185531 ACAAAC-----TTCTGGAA-A-A-ATAC-GAA-AGCAC-C-TAC--CACCTG-A-A----A--------------A----T---C---A--
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031014 45 -   9314153 ACAAAC-----TTCTGGAA-A-A-ATAC-GAA-AGCAC-C-TAC--CACCTG-A-A----A--------------A----T---C---A--
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955278 45 -  59632846 ACAAAC-----TTCTGGAA-A-A-ATAC-GAA-AGCAC-C-TAC--CACCTG-A-A----A--------------A----T---C---A--
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496582 45 +  63665305 ACAAAC-----TTCTGGAA-A-A-ATAC-GAA-AGCAC-C-TAC--CACCTG-A-A----A--------------A----T---C---A--
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                     732 12 -     12242 ACGAAC-----TTG----A-G-G--------------------------------------------------------------------
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 103
s Carlito_syrichta.NW_007259797.1                           140829 46 -    496798 acaaac-----ttctgata-a-a-attt-aaa-a----gtatatatcattt--g-a----a--------------a----a---a---aaa
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2691 30 -     11696 ----------------------A-ATCT-GAA-AGCACATA----TTGCCAG-A-A----A--------------A----C---A---A--
i Carollia_perspicillata.CarPer_scaffold_92756           I 13 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133445 40 +    179628 AAAAAC-----TTC----A-A-A-ATTT-GAA-AGCACATA----TTGACT--T-A----T--------------T----C---A---C--
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89012 45 +    217609 ACACAC-----ATCTGGCA-A-A-ATCT-GAA-ATCACGTA----TTACCTG-G-A----A--------------A----T---A---A--
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18347268 39 -  23392119 ACAAAC-----TTC----A-A-A-ATTT-GAA-A-GTGTC-GAC--TGCCt--g-a----a--------------a----a---a------
i Cavia_aperea.AVPZ01000300.1                            C 0 I 5
s Cavia_porcellus.DS562891.1                              18359528 39 -  23407841 ACAaac-----ttc----a-a-a-attt-gaa-aatgtcgAC----TGCCt--g-a----a--------------a----a---a------
i Cavia_porcellus.DS562891.1                             C 0 I 5
s Cavia_tschudii.CavTsc_scaffold_8919                        98403 39 +    143979 ACAAAC-----TTC----A-A-A-ATTT-GAA-AA-TGTC-GAC--TGCCT--G-A----A--------------A----A---A------
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 I 5
s Cephalopachus_bancanus.k141_2037105                         4745 46 -      8605 ACAAAC-----TTCTGATA-A-C-ATTT-AAA-AGTATATA----TCATTT--G-A----A--------------A----A---A---AAA
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227663 46 +  27778364 ACAAAC-----TTCCAGCA-AAA-ATTT-GAA-AGCATGTA----TCGCCTG-A-A----A--------------A----T---A---A--
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2381 46 -      3715 ACAAAC-----TTCCAGCA-AAA-ATTT-GAA-AGCATGTA----TCGCCTG-A-A----A--------------A----T---A---A--
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470081 38 +   4669795 ACAAAC-----ttctaata-a-a-attc-aaa-a------------ccctC--A-T----G--------------A----A---A---AAT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8630 38 -     19203 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3049 38 +      8260 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3279 38 +     27781 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3425 38 -     20310 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6409 38 +     29689 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             762 38 +      9989 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9097 38 -     27936 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9116 38 -     11289 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------TGCTT--A-T----G--------------A----A---A---AAT
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811492 38 +  39242232 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217183 38 -  21565898 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------TGCTT--A-T----G--------------A----A---A---AAT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34303 38 -     53127 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------TGCTT--A-T----G--------------A----A---A---AAT
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1595 38 +      7159 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9108 38 -     27947 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------TGCTT--A-T----G--------------A----A---A---AAT
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9084 38 +     17596 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------TGCTT--A-T----G--------------A----A---A---AAT
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39578 38 -     41420 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------TGCTT--A-T----G--------------A----A---A---GAT
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4605 48 -      6351 AGAAAA-----GTCTGGTA-G-A-GTTT-GAA-CACACACACAC--TGCCT--G-A----A--------------A----AAG-G---A--
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16515 37 -     52598 ACTAAC-----TTCTGGTA-A-A-ATCT-GAA-AGTACATA----TCAACT----------------------------------------
i Cheirogaleus_major.k141_333249                         C 0 I 12
s Cheirogaleus_medius.k141_1055463                           11864 37 +     57038 ACTAAC-----TTCTGGTA-A-A-ATCT-GAA-AGCACATA----TCAACT----------------------------------------
i Cheirogaleus_medius.k141_1055463                       C 0 I 12
s Chinchilla_lanigera.JH722012.1                           1248298 39 +   2543920 ACAAAC-----TTC----A-A-A-ATTT-GAA-AGTGTAGA----ctgcct--g-a----a--------------a----a---a------
i Chinchilla_lanigera.JH722012.1                         C 0 I 18
s Chlorocebus_aethiops.ctg25                              18423047 38 -  18827391 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9490 38 -     50209 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416495 38 + 135778131 ACAAAC-----ttctaata-a-a-attc-aaa-a------------ccctC--A-T----G--------------A----A---A---AAT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 14938 46 +     19366 AAAAAA-----TTCTGATA-A-A-GTTA-GAA-AATACATA----TTGCTT--G-A----A--------------A----A-GCA---A--
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170037 46 +    839153 aaaaaa-----ttctgATA-A-A-GTTA-GAA-AATACATA----TTGCTT--G-A----A--------------A----A-GCA---A--
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_172426               9034 44 -     10935 AGAAAC-----TTCTAG---A-A-ATCT-GAA-AACACATA----TTGCCT--T-A----G--------------G----G-GAA---A--
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          C 0 C 0
s Colobus_angolensis.KN981557.1                            1905015 38 +   2368649 ACAAAC-----ttctaata-a-a-attc-aaa-a------------ccctC--A-T----G--------------A----A---A---ACT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944633 38 + 200372422 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---ACT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31527 38 +     84244 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---ACT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545777 45 -  53390261 ACAAAC-----TTCTGGCT-A-A-ATAT-GAA-AGCACTTA----TTTCCC-CA-A----A--------------A----G---A---A--
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10295 45 -     20389 ATAAAC-----TTCTGGTG-A-A-TTTT-GAA-AACACATA----TTGCCTG-A-A----A--------------A----T---A---A--
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_287352               213 38 +      4208 ------------TCTGACA-C-A-ACTT-GAA-AATATATA----TTGCTC-CA-A----A--------------A----C---A---C--
i Crocidura_indochinensis.CroInd_scaffold_287352         I 5 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             17788 31 -     87169 ----------------------AAATGT-GAA-AACACAGA----TCGCCTG-A-A----A--------------A----C---A---A--
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 14 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35433 12 +     51376 ACAAAC-----TTC----A-G-G--------------------------------------------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 102
s Cuniculus_paca.CunPac_flattened_line_231100                 2644 39 +      5455 ACAAAC-----TTC----A-A-A-ATTT-AAA-AGTGTAGAC----TGCCT--T-A----A--------------A----A---A------
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 I 8
s Dasyprocta_punctata.DasPun_flattened_line_206793            1035 37 +      3576 ACGAAC-----TTC----A-A-A-ATTT-GAG-A-GTCA-AC----TGCCT--A-A----A--------------A----A---A------
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 I 5
s Dasypus_novemcinctus.JH564415.1                            60851 46 +   2246927 AGAAAA-----TTCtagta-a-a-attt-gaa-aacacattC----TGCCT--C-A----G--------------A----AAA-G---A--
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532695 46 -  12879189 ACCAAC-----TTGTGGTA-A-A-ATTT-GAA-AGCGTATA----TCACCT--G-A----A--------------A----A---A---AAT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16810970 45 +  35494412 ATACAC-----TTCTGgca-a-a-attt-aaa-a----tcacatgtTACCTG-A-A----A--------------A----T---A---A--
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8627722 30 +  20541912 ----------------------A-ATCT-GAA-AGCAC----atattgcca-ga-a----a--------------a----t---c---a--
i Desmodus_rotundus.KZ672289.1                           I 13 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669196 46 +   1390856 ACAAAC-----TTCCAGCA-AAA-ATTT-GAA-AGCATGTA----TTGCCTG-A-A----A--------------A----T---A---A--
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2271 46 +    198055 ACAAAC-----TTTCAGCA-AAA-ATTT-GAA-AGCATGTA----TCGCCTG-A-A----A--------------A----T---A---A--
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34094 39 +     67921 ACAAAC-----TTT----A-A-A-ATTT-GAA-AGTGTAGAC----TGCGT--A-A----A--------------A----A---A------
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 15
s Dipodomys_ordii.KN672350.1                              18895604 40 +  37912305 ACAGAC-----TTT----T-A-A-ATTC-AAA-GGCACA----gattgact--g-a----a--------------a----a---a---a--
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  11814 40 +     14536 ACAGAC-----TTT----T-A-A-ATTC-AAA-GGCACAGA----TTGACT--G-A----A--------------G----A---A---A--
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31289 40 -     42551 ACAAAC-----TTC----A-A-A-ATTT-GAA-AGTGTAGAC----TGCCT--GGA----A--------------A----A---A------
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 I 8
s Eidolon_helvum.KE759718.1                                   7219 36 +     11740 ACAAAC-----TTCTGGca-a-a-tttt-aaa-a-------------gcct-ga-a----a--------------A----T---G---A--
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1088798 44 +  10337057 AAAAAT-----TTTCAG---A-A-ATTG-GAA-CGCA-TC-TA--TTGCCT--G-G----A--------------A----AGG-G---A--
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16325568 45 -  41312741 ACAAAC-----TTCTGGAA-A-A-ATGT-GAA-AGTACGTA----TCACCTG-A-A----A--------------A----T---A---A--
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2143561 45 -  14770903 ACAAAC-----TTCTGGCA-A-A-ACTT-GAA-AGCACATA----TTGCCAG-A-A----G--------------A----T---A---A--
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279539 45 +   4378816 ACAAAC-----ATATGGCA-A-A-ATTT-GAA-AGCACATA----TTACCTG-A-A----A--------------A----T---A---A--
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527360 45 -  39960074 ACAAAC-----ATATGGCA-A-A-ATTT-GAA-AGCACATA----TTACCTG-A-A----A--------------A----T---A---A--
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29375 45 +    498745 ACAAAC-----ATATGGCA-A-A-ATTT-GAA-AGCACATA----TTACCTG-A-A----A--------------A----T---A---A--
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3325157 37 -   7059049 ------------TCTGGGA-A-A-ATTT-GAA-A-GTGA-ATA--TTGCCT--A-A----A--------------A----T---A---A--
i Erinaceus_europaeus.JH835339.1                         I 4609 C 0
s Erythrocebus_patas.Contig38                             21199726 38 -  21539334 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10646 45 +    133382 ACACAC-----TTCTGGCA-A-A-ATTC-AAA-ATCACA----TGTTACCTG-A-A----A--------------A----T---A---A--
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24584 44 -     44125 ACACAC-----TTCTGG-A-A-A-ATTC-AAA-ATCACATA----TTACCTG-A-A----A--------------A----T---A---A--
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.KN305074.1                                       420 44 -      2052 ACAAAC-----TTCTGGAA-A-A-AAGC-GAA-A-CACATA----TTGCCTG-A-A----A--------------A----T---A---A--
i Felis_catus.KN305074.1                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20185186 44 + 205367284 ACAAAC-----TTCTGGAA-A-A-AAGC-GAA-A-CACATA----TTGCCTG-A-A----A--------------A----T---A---A--
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_125938                10300 44 -     11347 ACAAAC-----TTCTGGAA-A-A-AAGC-GAA-A-CACATA----TCGCCTG-A-A----A--------------A----T---A---A--
i Felis_nigripes.FelNig_flattened_line_125938            C 0 C 0
s Fukomys_damarensis.KN121974.1                             848313 39 +   3816255 ATAAAT-----GTC----A-A-T-ATTT-GAA-AGTACAGA----TTgctt--g-a----g--------------a----a---g------
i Fukomys_damarensis.KN121974.1                          C 0 I 5
s Galagoides_demidoff.k141_31856                              3011 24 -      3432 aacaac-----tttatgca-g-a-atga-cag-a---------------------------------------------------------
i Galagoides_demidoff.k141_31856                         C 0 I 17
s Galeopterus_variegatus.GalVar_scaffold_56069               25244 46 +     26054 GCAAAC-----TTCTGGTA-A-A-ATTT-GAA-AGCACATA----TCACCT--A-A----A--------------T----A---A---AAG
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 I 11
s Glis_glis.GliGli_scaffold_19807                            30151 40 +     49224 GCAAAC-----TTC----A-A-A-ATTT-GAA-AGCACATA----TTGCCT--A-G----A--------------A----A---A---A--
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_2022027                               1289 38 +      3305 ACGAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Gorilla_beringei.k141_2022027                          C 0 C 0
s Gorilla_gorilla.CYUI03002401.1                              5512 38 +      7071 ACGAAC-----ttctaata-a-a-attc-aaa-a------------ccctC--A-T----G--------------A----A---A---AAT
i Gorilla_gorilla.CYUI03002401.1                         C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   29879 41 +     78134 ACAAAC-----TTC----A-A-A-ATTT-GAA-ATCACACA----TTGCCT--A-A----A--------------A---GA---A---A--
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               230959 32 +    327341 ----------------------AAATGT-GAA-AACACAGA----TTGCCT-TA-A----A--------------A----T-T-A---A--
i Helogale_parvula.HelPar_flattened_line_2585            I 14 C 0
s Heterocephalus_glaber.JH602082.1                        20659192 38 +  22651954 ACAAAC-----TTC----A-G-T-ATCT-GAA-AGCGCA-GC----Tgcct--g-a----g--------------a----a---g------
i Heterocephalus_glaber.JH602082.1                       C 0 I 5
s Heterohyrax_brucei.HetBruBak_scaffold_383740                   3 56 +       961 ATGAAC-----TTCTGG---A-A-ATCT-GAA-AACATA-TC-----ACCT--A-A----AACAAACAAACAAACA----AAA-A---A--
i Heterohyrax_brucei.HetBruBak_scaffold_383740           N 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111826 45 +    128679 ACACAT-----TTCCGGCA-A-A-ATTC-AAA-GGCAGACA----TTACCTG-A-A----A--------------A----T---A---A--
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108170 45 +   1711038 ACAAAC-----TTCTGGCA-A-A-ATTG-GAA-AACACGTA----TTACCTG-A-A----A--------------A----T---A---A--
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39609 46 +     43066 ACAAAC-----TTCTGGCA-A-A-ATTGGGAA-AACACATA----TTACCTG-A-A----A--------------A----T---A---A--
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    429064 38 +    630532 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  33069 31 +     55795 ----------------------AAATGT-AAA-AACAC-C-GA--TCGCCTG-A-A----A--------------A----T---A---A--
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 14 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19647 39 -    143317 ACAAAC-----TTC----A-A-A-ACTT-GAA-AGTGCAGA-A---TGCCT--G-A----A--------------A----A---A------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 8
s Hylobates_agilis.k141_307679                               11982 38 -     15490 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              53987 38 +     67168 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189537434 38 - 191637585 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3330532 38 -  11177569 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80743 15 +    135385 ----------------------------------------------TGCCT--G-G----G--------------A----A---GAAAA--
i Hystrix_cristata.HysCri_scaffold_5660                  I 7 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514379 45 -   7955117 ACAAAC-----CTC----G-G-A-AGTT-GAA-CGCATATA----Ttgcat--g-gaggaa--------------a---aa---a---a--
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   17957 37 +     31101 ACTAAC-----TTCTGGTA-A-A-ATTT-GAA-AGCACATA----TCACCT----------------------------------------
i Indri_indri.k141_3655594                               C 0 I 8
s Inia_geoffrensis.IniGeo_flattened_line_48101               22187 45 +     23964 ATACAC-----TTCTGGCA-A-A-ATTT-AAA-ATCACA----TGTTACCTG-A-A----A--------------A----T---A---A--
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271165 41 -   9596543 acAAAC-----TTC----A-A-A-ATTT-TAG-AGCACATA-A--TTGCCT--G-T----G--------------G----G---G---A--
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1454 45 -      3359 ATACAC-----TTCTGGGA-A-A-GTTC-AAA-ATCACA----TGTTACCTG-A-A----A--------------A----T---A---A--
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    11715 29 -     42476 ------------------------GCTT-GAA-AGCACATA----TTGCCAG-A-A----G--------------A----T---A---A--
i Lasiurus_borealis.LasBor_scaffold_32767                I 15 C 0
s Lepilemur_ankaranensis.k141_596936                          6589 37 -     23766 ACTAAC-----TTCTGGTA-A-A-ATGT-GAA-AGCACATA----TCACCT----------------------------------------
i Lepilemur_ankaranensis.k141_596936                     C 0 I 8
s Lepilemur_dorsalis.k141_577674                             24536 37 +     45836 ACTAAC-----TTCTGGTA-A-A-ATTT-GAA-AGCACATA----TCACCT----------------------------------------
i Lepilemur_dorsalis.k141_577674                         C 0 I 8
s Lepilemur_ruficaudatus.k141_420445                         31446 37 -     32627 ACTAAC-----TTCTGGTA-A-A-ATGT-GAA-AGCACATA----TCACCT----------------------------------------
i Lepilemur_ruficaudatus.k141_420445                     C 0 I 8
s Lepilemur_septentrionalis.k141_185316                      22594 37 +     54090 ACTAAC-----TTCTGGTA-A-A-ATTT-GAA-AGCACATA----TCACCT----------------------------------------
i Lepilemur_septentrionalis.k141_185316                  C 0 I 8
s Leptonychotes_weddellii.KB714746.1                       3035901 45 +   3914936 aaaaac-----ttctggaa-a-a-atat-gaa-agcataTA----TTACCTG-A-A----A--------------A----T---A---A--
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     3387 31 -     14121 ACAAAA-----TTG----ATA-A-ATTT-GAA-A-GA-ACACAC--TG-------------------------------------------
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 2
s Lipotes_vexillifer.KE559953.1                             267268 45 -    662738 ATACAC-----TTCTggca-a-a-attt-aaa-a----tcacatgtTACCTG-A-A----A--------------A----T---A---A--
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1431250 38 +   1826925 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             509 45 +     11245 ACTAAC-----TTCTGATA-A-A-ATTC-CAA-AACACATA----TCACCT--G-A----A--------------A----A---A----AT
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999344 45 +   6120653 ACTAAC-----TTCTGATA-A-A-ATTC-CAA-AACACATA----TCACCT--G-A----A--------------A----A---A----AT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214285 46 -  43346337 AGAAAC-----TTCTgg---a-a-attt-gaa-a--atttataaaTTGCCT--G-A----A--------------A----AAA-A---A--
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951518 45 -  59628241 ACAAAC-----TTCTGGAA-A-A-ATAC-GAA-AGCAC-C-TAC--CACCTG-A-A----A--------------A----T---C---A--
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               1436 38 +     40492 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670696 38 +  60120075 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--C-T----G--------------A----A---A---AAT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7194 38 -     26193 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            74984 38 -    114318 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   707 38 -     23192 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10156 38 -     29190 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---GAT
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18727 38 +     37952 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833815 38 + 187317192 ACAAAC-----ttctaata-a-a-attc-aaa-a------------ccctC--A-T----G--------------A----A---A---AAT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452373 38 -  25927173 ACAAAC-----ttctaata-a-a-attc-aaa-a------------ccctC--A-T----G--------------A----A---A---AAT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74576 38 +     89720 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1573 38 +     20474 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--C-T----G--------------A----A---A---AAT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1374 38 -     14993 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324243 38 -    668171 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Macaca_silenus.Contig273                               I 237 C 0
s Macaca_thibetana.k99_7456                                  15516 38 -     15935 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--C-T----G--------------A----A---A---AAT
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20313 38 -     45290 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87362 36 +     94391 ACAAAC-----TTCTGGCA-A-A-TTTT-AAA-A-------------GCCTG-A-A----A--------------A----T---A---A--
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23931866 38 -  24302211 ACAAAC-----TTGTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AGT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346046 38 +    752769 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15405 45 +    737560 TCAAAC-----TTCTGGCA-A-A-ATTT-GAA-AGCACA-TC---TTGCGTG-A-A----A--------------A----T---A---A--
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              46794 45 -    317179 TCAAAC-----TTCTGGCA-A-A-ATTT-GAA-AGCACA-TC---TTGCCTG-A-A----A--------------A----T---A---A--
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097232 45 -  40650429 ACAAAC-----CTC----G-G-A-AGTT-GAA-TGCATATA----Ttgcat--g-gaggaa--------------a---aa---a---a--
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6616 45 -    207569 ACAAAC-----TTCTGGGA-A-A-ATGT-GAA-AGCACATAC----TGCCTG-A-A----A--------------A----T---A---A--
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6033 45 +     13704 ACAAAC-----TTCTGGGA-A-A-ATGT-GAA-AGCACGTA----TCACCTG-G-A----A--------------A----T---A---A--
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    2855 45 +     10310 ATACAC-----TTCTGGCA-A-A-ATTC-AAA-ATCACA----TGTTACCTG-A-A----A--------------A----T---A---A--
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18283115 37 -  93316391 ACTATC-----TTCTGGTA-A-A-ATCT-GAA-AGCATATA----TCACCT----------------------------------------
i Microcebus_murinus.CM007674.1                          C 0 I 9
s Microgale_talazaci.MicTal_scaffold_6613                    15260 46 -    145209 AGAGAC-----TTCTTA---A-A-TATT-GAA-AATACATA----TTGTCTGGG-A----G--------------A----G-GTG---T--
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13233 30 -     19307 ----------------------A-ATCT-AAA-AGCACATA----TTGCCAG-A-A----A--------------A----T---A---A--
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 13 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1848651 45 +   8254450 ACAAAC-----TTCTGGCA-A-A-ACTT-GAA-AGTACATA----TTACCAG-A-C----A--------------A----T---A---A--
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32520 45 +     64694 ACAAAC-----TTCTGGCA-A-A-ACTT-GAA-AGTACATA----TTACCAG-A-C----A--------------A----T---A---A--
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3603 38 -     28506 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62231 45 -     63350 AAAAAC-----TTCTGGAA-A-A-ATGT-GAA-AGCATATA----TTACCTG-A-A----A--------------A----T---A---A--
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      4486 21 -     37649 ------------------------ATTT-GAA-AGCATATA----TCACCT----------------------------------------
i Mirza_zaza.k141_952172                                 I 10 I 9
s Monodon_monoceros.MonMon_M_scaffold_103                    26360 45 -    437263 ATACAC-----TTCTGGCA-A-A-ATTT-AAA-ATCACA----TGTTACCTG-A-A----A--------------A----T---A---A--
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137624 45 -    366855 ACAAAC-----CTCCGGCA-A-A-ATTT-GAG-AGCAC-C---TGTTCCCGG-A-A----A--------------A----T---A---A--
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   24149 32 +     37127 ----------------------AATTGT-GAA-AACACGGA----TCGCCT-TA-A----A--------------A----T-T-A---A--
i Mungos_mungo.MunMun_flattened_line_23663               I 14 C 0
s Murina_feae.MurFea_scaffold_85699                           4710 45 +     14753 ACGAAC-----TTCTGGCA-A-A-ACTT-GAA-AGCACATA----TTGCCAG-A-A----G--------------A----T---G---A--
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2146 40 +     14296 GCAAAC-----TTT----A-A-A-ATTT-GAA-AGCACATA----TTGCCT--A-G----A--------------A----A---A---A--
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               297455 42 -  14710649 ---AAC-----TTCTGGAA-A-A-ATGG-GAA-AGTACGTA----TCACCTG-A-A----A--------------A----T---A---A--
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     70919 12 -     80779 AGAAAC-----TTG----A-G-G--------------------------------------------------------------------
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 I 103
s Myotis_brandtii.KE162005.1                                277818 45 -  10118263 ACAAAC-----TTCTGGCA-A-A-ACTT-GAA-AGCACATA----TTGCCAG-A-A----G--------------A----T---A---A--
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585389 45 -   6019432 ACAAAC-----TTCTGGCA-A-A-ACTT-GAA-AGCACATA----TTGCCAG-A-A----G--------------A----T---A---A--
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3901606 45 -   4330536 ACAAAC-----TTCTGGCA-A-A-ACTT-GAA-AGCACATA----TTGCCAG-A-A----G--------------A----T---A---A--
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32155 45 +     33610 ACAAAC-----TTCTGGCA-A-A-ACTT-GAA-AGCACATA----TTGCCAG-A-A----G--------------A----T---A---A--
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              185890 46 +    196477 AAAATA-----ATCTGGCA-A-A-GTTT-GAA-AATAC-C-TAC--TGCCT--G-A----A--------------A----A-GAG---A--
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025311 43 -   3037898 ataaaa-----ctc----a-c-a-tttt-aaa-a----gtatatattgcCT--A-G----A-GA--C--------A----A---A---A--
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                                9616 38 +     21681 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865316 45 +   7148211 ATACAC-----TTCTGGCA-A-A-ATTT-AAA-ATCAC----GTGTTACCTG-A-A----A--------------A----T---A---A--
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756184 43 +    783361 ACAAAC-------CTGGCA-A-A-ATCT-GAA-AGCACTCA-A---TGCCAG-A-A----A--------------G----T---A---A--
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145779 45 -   9404916 ACAAAC-----TTCTGGAA-A-A-ATAC-GAA-AGCAC-C-TAC--CACCTG-A-A----A--------------G----T---C---A--
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102574312 46 - 196305487 ACTAGC-----TTTTGATA-A-A-ATTC-CAA-AGCACATA----TCACCT--A-AA---A--------------A----A---A----AT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             1998 46 +      8486 ACTAGC-----TTTTGATA-A-A-ATTC-CAA-AGCACATA----TCACCT--A-AA---A--------------A----A---A----AT
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744740 45 + 199412804 ACTAAC-----TTCTGATA-A-A-ATTC-CAA-AGCACATA----TCACCT--A-A----A--------------A----A---A----AT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355294  2 +   3988456 ---------------------------------------------------------------------------A----T----------
i Ochotona_princeps.JH802162.1                           I 2 C 0
s Odobenus_rosmarus.KB229312.1                              500520 45 -   2017862 ACAAAC-----TTCTGGAA-A-A-ATGT-GAA-AGCACATA----TTACCTG-A-A----A--------------A----T---A---A--
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Orcinus_orca.KB316932.1                                  2781231 45 -  10937097 ATACAC-----TTCtggca-a-a-attt-aaa-a----tcacatgtTACCTG-A-A----A--------------A----T---A---A--
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6622 44 -     18566 AGAAAC-----TTCTGG---A-A-ATTT-GAA-AACACATA----TTGCTA--A-A----A--------------A----GGG-G---A--
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67144229 31 + 174332312 acaaaa-----ttg----ata-a-actt-gAA-A-GA-ACACAC--TG-------------------------------------------
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 2
s Otocyon_megalotis.JAEUCK010005147.1                       458533 45 -    559221 ACAAAC-----TTCTGGAA-A-A-ATAC-GAA-AGCAC-C-TAC--CACCTG-A-A----A--------------A----T---C---A--
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Pan_paniscus.KQ411613.1                                    35999 38 +     80009 ACGAAC-----ttctaata-a-a-attc-aaa-a------------ccctC--A-T----G--------------A----A---A---AAT
i Pan_paniscus.KQ411613.1                                T 2268 C 0
s Pan_troglodytes.CM009242.2                             187569991 38 + 189151597 ACGAAC-----ttctaata-a-a-attc-aaa-a------------ccctC--A-T----G--------------A----A---A---AAT
i Pan_troglodytes.CM009242.2                             C 0 N 0
s Panthera_onca.PanOnc_flattened_line_3271                  140396 44 +    230217 ACAAAC-----TTCTGGAA-A-A-AAGT-GAA-A-CAC-C-TA--TCGCCTG-A-A----A--------------A----T---A---A--
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                251925 44 +  18783137 ACAAAC-----TTCTGGAA-A-A-AAGT-GAA-A-CAC-C-TA--TTGCCTG-A-A----A--------------A----T---A---A--
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4710370 44 -   8748460 ACAAAC-----TTCTGGAA-A-A-AAGT-GAA-A-CAC-C-TA--TCGCCTG-A-A----A--------------A----T---A---A--
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183437190 38 + 183742232 ACAAAC-----ttctaata-a-a-attc-aaa-a------------ccctC--A-T----G--------------A----A---A---AAT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1252 38 +     20448 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20557874 38 +  20919399 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_4051466                                   1452 38 -      1598 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Papio_kindae.k141_4051466                              C 0 N 0
s Papio_papio.k141_802527                                     3284 38 +     27711 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  3273 38 +      9205 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      1194 47 -     78924 ACAAAC-----TTCTGGAA-A-AAATGT-GAAAAACACATAC----GGCCTG-A-A----A--------------A----T---A---G--
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            4490 46 +     13100 ACTAAC-----TTCTGATA-A-A-ATTC-CAA-AACACA----TTTCACCT--G-A----A--------------A----A---A---AAT
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             2858 46 +     25941 ACTAAC-----TTCTGATA-A-A-ATTC-CAA-AACACA----TTTCACCT--G-A----A--------------A----A---A---AAT
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25162 35 +     32600 ACAGAC-----TTT----T-A-A-ATTT-GAA-AGCACA-GC---TTGACT--G-A-----------------------------------
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 I 3
s Petromus_typicus.PetTyp_scaffold_42190                     25663 39 -     29689 GTAAAA-----TTC----A-G-T-ATTT-GAA-CGC-GA-AGA--TTGTCT--G-A----G--------------A----A---G------
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 I 5
s Phocoena_phocoena.PhoPho_flattened_line_24159               8278 45 +     63832 ATACAC-----TTCTGGCA-A-A-ATTT-AAA-ATCACA----TGTTACCTG-A-A----A--------------A----T---A---A--
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38133 38 +     62158 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CTCTC--A-T----G--------------A----A---A---AAT
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        32860 38 +     89929 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CTCTC--A-T----G--------------A----A---A---AAT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34276 38 +     51399 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CTCTC--A-T----G--------------A----A---A---AAT
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290497 38 -  14605196 ACAAAC-----ttctaata-a-a-attc-aaa-a------------ctctC--A-T----G--------------A----A---A---AAT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_7723             79176 45 +     79650 ACAAAC-----TTCTGGCA-A-A-ACTT-GAA-AGCACATA----TTGCCAG-A-A----G--------------A----T---A---A--
i Pipistrellus_pipistrellus.PipPip_scaffold_7723         C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           33984 45 +     35617 ATACAC-----TTCTGGCA-A-A-ATTC-AAA-ATCACA----TGTTACCTG-A-A----A--------------A----T---A---A--
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189125037 38 + 189387572 ACAAAC-----Ttctaata-a-a-attc-aaa-a------------ccctC--A-A----G--------------A----A---A---AAT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9564880 38 +   9816681 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-A----G--------------A----A---A---AAT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               67776 38 -     81375 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CTCTC--A-T----G--------------A----A---A---AAT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9603 38 +     10147 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CTCTC--A-T----G--------------A----A---A---AAT
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9764 56 -     22811 ATGAAC-----TTCTGG---A-A-ATCT-GAA-AACATA-TC-----ACCT--A-A----AACAAACAAACAAACA----AAA-A---A--
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     985830 37 +   2598838 ACTAAC-----TTCTGGTA-A-A-ATTT-GAA-AGCACATA----TCACCT----------------------------------------
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 349
s Propithecus_coronatus.k141_347390                          24118 37 +     38485 ACTAAC-----TTCTGGTA-A-A-ATTT-GAA-AGCACATA----TCACCT----------------------------------------
i Propithecus_coronatus.k141_347390                      C 0 I 350
s Propithecus_diadema.k141_357118                              280 37 +      4256 ACTAAC-----TTCTGGTA-A-A-ATTT-GAA-AGCACATA----TCACCT----------------------------------------
i Propithecus_diadema.k141_357118                        C 0 I 349
s Propithecus_edwardsi.k141_1176054                          21638 37 +     35766 ACTAAC-----TTCTGGTA-A-A-ATTT-GAA-AGCACATA----TCACCT----------------------------------------
i Propithecus_edwardsi.k141_1176054                      C 0 I 349
s Propithecus_perrieri.k141_1630595                          16917 37 +     17239 ACTAAC-----TTCTGGTA-A-A-ATTT-GAA-AGCACATA----TCACCT----------------------------------------
i Propithecus_perrieri.k141_1630595                      C 0 N 0
s Propithecus_tattersalli.k141_790011                        23632 37 -     67325 ACTAAC-----TTCTGGTA-A-A-ATTT-GAA-AGCACATA----TCACCT----------------------------------------
i Propithecus_tattersalli.k141_790011                    C 0 I 350
s Propithecus_verreauxi.k141_1019028                         13348 37 -     13615 ACTAAC-----TTCTGGTA-A-A-ATTT-GAA-AGCACATA----TCACCT----------------------------------------
i Propithecus_verreauxi.k141_1019028                     C 0 N 0
s Pteronotus_parnellii.KE909381.1                            11003 45 -     21811 ACAAAC-----CTCTGGCA-A-A-ATCT-GAA-AGCACA----TGTTGCCAG-G-A----A--------------A----T---A---A--
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36474 45 +     42204 ACAAAC-----TTCTGGAA-A-A-ATGT-GAA-AGTACGTA----TCACCTG-A-A----A--------------A----T---A---A--
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973491 36 +  28871421 ACAAAC-----TTCTGGCA-A-A-TCTT-AAA-A-------------GCCTG-A-A----A--------------A----T---A---A--
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1428 36 -      8028 ACAAAC-----TTCTGGCA-A-A-TCTT-AAA-A-------------GCCTG-A-A----A--------------A----T---A---A--
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20262905 44 -  38429054 ACaaac-----ttctggaa-g-a-aagt-gAA-A-CACATA----TCGCCTG-A-A----A--------------A----T---A---A--
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                              9605 38 -     91421 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603739 38 +   7812017 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9578 38 -     72585 ACAAAC-----TTCTAACA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        366717 45 -   3329780 ACAAAC-----TTCTGgca-a-a-atct-gaa-a----atacataTTACCTG-A-A----A--------------A----T---A---A--
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                              991 38 -     11128 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230368 38 - 195417433 ACAAAC-----ttctaata-a-a-attc-aaa-a------------ccctC--A-T----G--------------A----A---A---AAT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7666076 38 +   7961872 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84476 36 -     96226 ACAAAC-----TTCTGGCA-A-A-TTTT-AAA-A-------------GCCTG-A-A----A--------------A----T---A---A--
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151203 45 -    313613 ACAAAC-----TTCTGGCC-A-A-ATTT-GAA-AGCGCTTA----TTTTCC-CA-A----A--------------A----G---A---A--
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          14120 38 -     19888 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21325 38 +     39453 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            1849 38 +     27826 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1371 38 -     19483 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1433 38 +      7198 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9693 38 +     15514 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187491 43 -    191337 GCAAAT-----ATCTGACC-A-A-ATTT-GAA-AGTATA------TTGTCC-AA-A----A--------------G----T---C---A--
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13646863 30 -  18376816 ----------------------a-attt-gga-ATTATACA----TTGCGC-CA-A----A--------------A----T---A---A--
i Sorex_araneus.JH798187.1                               I 11 C 0
s Spermophilus_dauricus.KZ294078.1                         1948022 46 -   3870691 ACAAAC-----CTC----C-G-A-AGTT-GAA-CGCATATA----Ttgcat--g-gaggaa--------------a--aaa---a---a--
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27017 45 +     97271 ACAAAC-----TTCTGTAA-A-A-ATGT-GAA-AGCATATA----GCACCTG-A-A----A--------------A----T---A---A--
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629               6986 32 -    196729 ----------------------AAATGT-GAA-AACACAGA----TCGTCT-TA-A----A--------------A----T-T-A---A--
i Suricata_suricatta.SurSur_flattened_line_6629          I 14 C 0
s Sus_scrofa.CM000828.4                                   62882272 45 -  69701581 GCACAC-----ATCTGGAA-A-A-ATGT-GAA-AGCACGTA----TTACCt-gg-a----a--------------a----a---a---a--
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1087669 38 -   1523678 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6621 45 +     41958 ACAAAC-----TTCTGGCA-A-A-ATTT-GAA-AACACATA----TTGCCAG-A-A----A--------------T----T---A---A--
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69254 38 +    116680 AAAACA-----ATCTGGCA-A-A-GTCT-GAA-AATAC-C-TAC--TGCCT--G-------------------------------------
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 I 6
s Tapirus_indicus.TapInd_scaffold_9301                      114995 44 -    156842 --AAAC-----TTCCAGCA-GAA-GTTT-GAA-AGCACATA----TTGCCTG-A-A----A--------------A----T---A---A--
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383448 46 +    539355 ACAAAC-----TTCCAGCA-AAA-ATTT-GAA-AGCACATA----TTGCCTG-A-A----A--------------A----T---A---A--
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10444 46 +     70052 ACAAAC-----TTCTGATA-A-A-ATTT-AAA-AGTATA----TGTCATTT--G-A----A--------------A----A---A---AAA
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               14749 46 +     25099 ACAAAC-----TTCTGATA-A-A-ATTT-AAA-AGTATA----TGTCATTT--G-A----A--------------A----A---A---AAA
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422699 38 + 186847797 ACAAAC-----ttctaata-a-a-attc-aaa-a------------ccctC--A-T----G--------------A----A---A---AAT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103003 39 +    114563 ATAAAC-----TTC----A-A-T-ATTT-GAA-AA-TGA-AGA--TTACCT--G-A----G--------------A----G---G------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 5
s Tolypeutes_matacus.TolMat_scaffold_228639                   1661 50 +      8208 AGAAAA-----TTCTGGTA-A-A-GTTT-GAA-CACACACACACACTGCCT--G-A----A--------------A----AAG-G---A--
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78778 30 +    610378 ----------------------A-ATCT-GCA-AGCACATA----TTGCCAG-A-A----A--------------A----G---A---C--
i Tonatia_saurophila.TonSau_scaffold_294                 I 13 C 0
s Trachypithecus_auratus.k141_722599                          5430 38 -     20410 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9622 38 +     15221 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5530 38 +     19930 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       1957 38 -     19997 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42076 38 -     60166 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9548 38 -     27529 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9488 38 -     18194 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3224 38 -     21137 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    1926 38 -     10723 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1079 38 +      9834 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19397 38 +     32220 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933494 38 +   6242583 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2739 38 +     20839 ACAAAC-----TTCTAATA-A-A-ATTC-AAA-A------------CCCTC--A-T----G--------------A----A---A---AAT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    272 45 -      1748 ACACAC-----TTCTGGCA-A-A-ATTC-AAA-TGCACATA----TTACCTG-A-A----A--------------A----T---A---G--
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 C 0
s Tupaia_chinensis.KB320699.1                              2149379 51 +   4065304 ACAAAGAATGATACTAGTA-A-A-ATGT-AAA-AGCATATA----TTGtct--g-a----a--------------a----a---a---gag
i Tupaia_chinensis.KB320699.1                            C 0 I 1
s Tupaia_tana.TupTan_flattened_line_97126                     2998 51 -     10553 ACAAAGAGTAATACTAGTA-A-A-ATGT-GAA-AACATATA----TTGCCT--G-G----A--------------A----A---A---GAG
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 1
s Tursiops_truncatus.MRVK01000835.1                       15737478 45 +  33153633 ATACAC-----TTCtggca-a-a-attt-aaa-a----tcacatgtTACCTG-A-A----A--------------A----T---A---A--
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   51322 45 -     77625 AATAAC-----TTCTGGCC-A-A-ATTT-GAA-AACACA-A-A--TTTCCC-CA-A----A--------------A----G---A---A--
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4846716 46 -   5085361 acaaac-----ttctagaaaa-a-atgT-GAA-AGCACATA----TCACCTG-A-A----A--------------A----T---A---A--
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368179 45 -   5488506 ACACAG-----TTCTGGCA-A-A-ATTT-GAA-AGCACATA----TTACCTG-A-A----A--------------A----T---A---A--
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7194 45 -     43706 acaaac-----ttctggaa-a-a-atat-gaa-a----gcacttaccaCCTG-A-A----A--------------A----T---C---A--
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19516 46 -     24430 ACAAAC-----TTC----A-A-A-AGTT-GAA-AGCATATA----TTGCAT--G-GAGAAA--------------AAA--A---A---A--
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1641 46 +      2932 ACAAAC-----TTCTGGAAAA-A-ATGT-GAA-AGCACATA----TTACCTG-A-A----A--------------A----T---A---A--
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9799 41 +     63895 AAAAAC-----TTC----A-A-A-ATTT-TAA-AACACA---TTGTAGCCT--G-T----G--------------G----T---G---A--
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11170 45 +     12536 ATACAC-----TTCTGGCA-A-A-ATTC-AAA-ATCACA----TGTTACCTG-A-A----A--------------A----T---A---A--
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Saiga_tatarica.SaiTat_scaffold_373180                       3225 222 +      4321 I
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4576 218 +     55207 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1264036 222 -   2937107 I
e Ovis_canadensis.OviCan_scaffold_2572                      173103 222 -    191736 I
e Ovis_aries.CM001607.2                                   17584682 222 +  44047080 I
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144328 218 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Moschus_moschiferus.MosMos_scaffold_61429                  27091 222 -     27816 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17151 222 +     36099 I
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       309953 220 +    607251 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capra_hircus.CM004588.1                                 18059667 222 -  44709034 I
e Capra_aegagrus.CM003241.1                               18828947 222 +  46296322 I
e Bubalus_bubalis.KI419123.1                               2818124 220 +   4408762 I
e Bos_taurus.CM000203.6                                   18082634 220 +  45695690 I
e Bos_mutus.JH880303.1                                     1124552 224 -   1948126 I
e Bos_indicus.CM003047.1                                  20271996 220 +  48749331 I
e Bison_bison.KN261452.1                                    198791 220 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    25751 222 +     34529 I
e Antilocapra_americana.AntAmePen_scaffold_12469             97280 223 -    100397 I
e Ammotragus_lervia.NIVO01071767.1                          674829 222 -   2318259 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                        675  2 +     62944 G---------G
s Acinonyx_jubatus.LLWD01001279.1                           816800  2 -   1699592 A---------G
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506761  2 -  29979442 A---------G
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 75
s Ailurus_fulgens.LNAC01001112.1                             75051  2 -    347723 A---------G
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 8
s Allactaga_bullata.AllBul_scaffold_9566                     64838  2 -     89534 A---------T
i Allactaga_bullata.AllBul_scaffold_9566                 I 2 I 3
s Allenopithecus_nigroviridis.k141_3361533                    9150  2 -     52922 G---------G
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9075  2 -     28001 G---------G
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9201  2 -      9772 G---------G
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            358  2 -     12518 G---------G
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      182951  2 +    412891 A---------G
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 9
s Aplodontia_rufa.AprRuf_scaffold_68852                       7124  2 +     20879 A---------T
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 22
s Arctocebus_calabarensis.k141_288239                        14303  2 +     17124 G---------C
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2303  2 +     43469 A---------G
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 9
s Avahi_laniger.k141_765380                                  49145  2 -     92717 A---------T
i Avahi_laniger.k141_765380                              I 8 C 0
s Avahi_peyrierasi.k141_1424874                              49770  2 +     85213 A---------T
i Avahi_peyrierasi.k141_1424874                          I 8 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191379  2 +  23207421 A---------G
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         1845  2 -     18090 A---------G
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998735  2 -  17673402 t---------g
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331199  2 -   7040546 t---------g
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399475  2 -   1652518 t---------g
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795615  2 -  60362399 C---------A
i CanFam4.chr16                                          C 0 I 8
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181672  2 -    185531 C---------A
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 I 8
s Canis_lupus_dingo.QKWQ01000480.1                         9031059  2 -   9314153 C---------A
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 8
s Canis_lupus_familiaris.chr16                            17955323  2 -  59632846 C---------A
i Canis_lupus_familiaris.chr16                           C 0 I 8
s Canis_lupus_orion.HG994398.1                            18496627  2 +  63665305 C---------A
i Canis_lupus_orion.HG994398.1                           C 0 I 8
s Carlito_syrichta.NW_007259797.1                           140875  2 -    496798 g---------g
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2721  2 -     11696 A---------G
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 9
s Castor_canadensis.CasCan_scaffold_2074                    133485  2 +    179628 T---------G
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89057  2 +    217609 A---------G
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 3
s Cephalopachus_bancanus.k141_2037105                         4791  2 -      8605 G---------G
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227709  2 +  27778364 A---------G
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2427  2 -      3715 A---------G
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470119  2 +   4669795 G---------G
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8668  2 -     19203 G---------G
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3087  2 +      8260 G---------G
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3317  2 +     27781 G---------G
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3463  2 -     20310 G---------G
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6447  2 +     29689 G---------G
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             800  2 +      9989 G---------G
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9135  2 -     27936 G---------G
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9154  2 -     11289 G---------G
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811530  2 +  39242232 G---------G
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217221  2 -  21565898 G---------G
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34341  2 -     53127 G---------G
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1633  2 +      7159 G---------G
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9146  2 -     27947 G---------G
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9122  2 +     17596 G---------G
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39616  2 -     41420 G---------G
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4653  2 -      6351 G---------T
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16564  2 -     52598 G---------T
i Cheirogaleus_major.k141_333249                         I 12 C 0
s Cheirogaleus_medius.k141_1055463                           11913  2 +     57038 G---------T
i Cheirogaleus_medius.k141_1055463                       I 12 C 0
s Chlorocebus_aethiops.ctg25                              18423085  2 -  18827391 G---------G
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9528  2 -     50209 G---------G
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416533  2 + 135778131 G---------G
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 14984  2 +     19366 A---------T
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170083  2 +    839153 A---------T
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_172426               9078  2 -     10935 A---------A
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          C 0 C 0
s Colobus_angolensis.KN981557.1                            1905053  2 +   2368649 G---------G
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944671  2 + 200372422 G---------G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31565  2 +     84244 G---------G
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545822  2 -  53390261 A---------G
i Condylura_cristata.JH655891.1                          C 0 I 6
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10340  2 -     20389 G---------A
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_287352               251  2 +      4208 A---------G
i Crocidura_indochinensis.CroInd_scaffold_287352         C 0 I 50
s Cryptoprocta_ferox.CryFer_flattened_line_16129             17819  2 -     87169 A---------G
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            60897  2 +   2246927 A---------T
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532741  2 -  12879189 A---------T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811015  2 +  35494412 A---------G
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8627752  2 +  20541912 a---------g
i Desmodus_rotundus.KZ672289.1                           C 0 I 9
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669242  2 +   1390856 A---------G
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2317  2 +    198055 A---------G
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dipodomys_ordii.KN672350.1                              18895644  2 +  37912305 a---------t
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  11854  2 +     14536 A---------T
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 C 0
s Eidolon_helvum.KE759718.1                                   7255  2 +     11740 A---------G
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1088842  2 +  10337057 A---------G
i Elephantulus_edwardii.JH947257.1                       C 0 I 28
s Enhydra_lutris.KZ291758.1                               16325613  2 -  41312741 A---------G
i Enhydra_lutris.KZ291758.1                              C 0 I 8
s Eptesicus_fuscus.JH977646.1                              2143606  2 -  14770903 A---------G
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279584  2 +   4378816 G---------G
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527405  2 -  39960074 G---------G
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29420  2 +    498745 G---------G
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3325194  2 -   7059049 A---------G
i Erinaceus_europaeus.JH835339.1                         C 0 I 5
s Erythrocebus_patas.Contig38                             21199764  2 -  21539334 G---------G
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10691  2 +    133382 A---------G
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24628  2 -     44125 A---------G
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.KN305074.1                                       464  2 -      2052 A---------G
i Felis_catus.KN305074.1                                 C 0 n 0
s Felis_catus_fca126.CM031415.1                           20185230  2 + 205367284 A---------G
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_125938                10344  2 -     11347 A---------G
i Felis_nigripes.FelNig_flattened_line_125938            C 0 C 0
s Galagoides_demidoff.k141_31856                              3052  2 -      3432 a---------c
i Galagoides_demidoff.k141_31856                         I 17 I 5
s Galeopterus_variegatus.GalVar_scaffold_56069               25301  2 +     26054 A---------T
i Galeopterus_variegatus.GalVar_scaffold_56069           I 11 C 0
s Glis_glis.GliGli_scaffold_19807                            30191  2 +     49224 A---------T
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_2022027                               1327  2 +      3305 G---------G
i Gorilla_beringei.k141_2022027                          C 0 C 0
s Gorilla_gorilla.CYUI03002401.1                              5550  2 +      7071 G---------G
i Gorilla_gorilla.CYUI03002401.1                         C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   29920  2 +     78134 A---------T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               230991  2 +    327341 G---------G
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 1
s Heterohyrax_brucei.HetBruBak_scaffold_383740                  59 10 +       961 GAT-GGGGAAG
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111871  2 +    128679 A---------G
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108215  2 +   1711038 G---------G
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39655  2 +     43066 G---------G
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    429102  2 +    630532 G---------G
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  33100  2 +     55795 A---------G
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_307679                               12020  2 -     15490 G---------G
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              54025  2 +     67168 G---------G
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189537472  2 - 191637585 G---------G
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3330570  2 -  11177569 G---------G
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80758  2 +    135385 A---------T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514424  2 -   7955117 a---------t
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   18002  2 +     31101 A---------T
i Indri_indri.k141_3655594                               I 8 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22232  2 +     23964 T---------G
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271206  2 -   9596543 A---------T
i Jaculus_jaculus.JH725527.1                             C 0 I 3
s Kogia_breviceps.KogBre_flattened_line_192630                1499  2 -      3359 A---------G
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    11744  2 -     42476 A---------G
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6634  2 -     23766 A---------T
i Lepilemur_ankaranensis.k141_596936                     I 8 C 0
s Lepilemur_dorsalis.k141_577674                             24581  2 +     45836 A---------T
i Lepilemur_dorsalis.k141_577674                         I 8 C 0
s Lepilemur_ruficaudatus.k141_420445                         31491  2 -     32627 A---------T
i Lepilemur_ruficaudatus.k141_420445                     I 8 C 0
s Lepilemur_septentrionalis.k141_185316                      22639  2 +     54090 A---------T
i Lepilemur_septentrionalis.k141_185316                  I 8 C 0
s Leptonychotes_weddellii.KB714746.1                       3035946  2 +   3914936 A---------G
i Leptonychotes_weddellii.KB714746.1                     C 0 I 8
s Lepus_americanus.LepAme_scaffold_107385                     3420  1 -     14121 ----------A
i Lepus_americanus.LepAme_scaffold_107385                I 2 C 0
s Lipotes_vexillifer.KE559953.1                             267313  2 -    662738 A---------G
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1431288  2 +   1826925 G---------G
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             554  2 +     11245 A---------C
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999389  2 +   6120653 A---------C
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214331 11 -  43346337 GATTGGGGTAG
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951563  2 -  59628241 C---------A
i Lycaon_pictus.CM007581.1                               C 0 I 8
s Macaca_arctoides.k141_2326796                               1474  2 +     40492 G---------G
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670734  2 +  60120075 G---------G
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7232  2 -     26193 G---------G
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75022  2 -    114318 G---------G
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   745  2 -     23192 G---------G
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10194  2 -     29190 G---------G
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18765  2 +     37952 G---------G
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833853  2 + 187317192 G---------G
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452411  2 -  25927173 G---------G
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74614  2 +     89720 G---------G
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1611  2 +     20474 G---------G
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1412  2 -     14993 G---------G
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324281  2 -    668171 G---------G
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15554  2 -     15935 G---------G
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20351  2 -     45290 G---------G
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87398  2 +     94391 A---------G
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23931904  2 -  24302211 G---------G
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346084  2 +    752769 G---------G
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15450  2 +    737560 A---------G
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              46839  2 -    317179 A---------G
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097277  2 -  40650429 a---------t
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6661  2 -    207569 G---------G
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6078  2 +     13704 A---------G
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 8
s Mesoplodon_bidens.MesBid_scaffold_108144                    2900  2 +     10310 A---------G
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18283161  2 -  93316391 G---------T
i Microcebus_murinus.CM007674.1                          I 9 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    15306  2 -    145209 G---------C
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13263  2 -     19307 A---------G
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 9
s Miniopterus_natalensis.LDJU01000034.1                    1848696  2 +   8254450 C---------T
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32565  2 +     64694 C---------T
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3641  2 -     28506 G---------G
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62276  2 -     63350 A---------G
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 I 8
s Mirza_zaza.k141_952172                                      4516  2 -     37649 G---------T
i Mirza_zaza.k141_952172                                 I 9 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26405  2 -    437263 A---------G
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137669  2 -    366855 A---------G
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 9
s Mungos_mungo.MunMun_flattened_line_23663                   24181  2 +     37127 G---------G
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           4755  2 +     14753 A---------G
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2186  2 +     14296 A---------T
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               297497  2 -  14710649 A---------G
i Mustela_putorius.JH418006.1                            C 0 I 8
s Myotis_brandtii.KE162005.1                                277863  2 -  10118263 A---------G
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585434  2 -   6019432 A---------G
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3901651  2 -   4330536 G---------G
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32200  2 +     33610 A---------G
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              185936  2 +    196477 A---------T
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025354  2 -   3037898 A---------C
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                                9654  2 +     21681 G---------G
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865361  2 +   7148211 A---------G
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756227  2 +    783361 A---------G
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 14
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145824  2 -   9404916 C---------A
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 8
s Nycticebus_bengalensis.LG01                            102574358  2 - 196305487 A---------C
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2044  2 +      8486 A---------C
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744785  2 + 199412804 A---------C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355296  1 +   3988456 ----------C
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              500565  2 -   2017862 A---------G
i Odobenus_rosmarus.KB229312.1                           C 0 I 8
s Orcinus_orca.KB316932.1                                  2781276  2 -  10937097 A---------G
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6666  2 -     18566 G---------G
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67144262  1 + 174332312 ----------A
i Oryctolagus_cuniculus.CM000791.1                       I 2 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458578  2 -    559221 C---------A
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 8
s Pan_paniscus.KQ411613.1                                    36037  2 +     80009 G---------G
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189136989  2 + 189151597 G---------G
i Pan_troglodytes.CM009242.2                             N 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  140440  2 +    230217 A---------G
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                251969  2 +  18783137 A---------G
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4710414  2 -   8748460 A---------G
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183437228  2 + 183742232 G---------G
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1290  2 +     20448 G---------G
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20557912  2 +  20919399 G---------G
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                     33  2 +     41871 G---------G
i Papio_kindae.k141_1936966                              N 0 C 0
s Papio_papio.k141_802527                                     3322  2 +     27711 G---------G
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  3311  2 +      9205 G---------G
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      1241  2 -     78924 A---------G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            4536  2 +     13100 A---------C
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             2904  2 +     25941 A---------C
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25200  2 +     32600 A---------T
i Perognathus_longimembris.PerPac_flattened_line_34437   I 3 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8323  2 +     63832 A---------G
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38171  2 +     62158 G---------G
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        32898  2 +     89929 G---------G
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34314  2 +     51399 G---------G
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290535  2 -  14605196 G---------G
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_7723             79221  2 +     79650 A---------G
i Pipistrellus_pipistrellus.PipPip_scaffold_7723         C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34029  2 +     35617 A---------G
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189125075  2 + 189387572 G---------G
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9564918  2 +   9816681 G---------G
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               67814  2 -     81375 G---------G
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9641  2 +     10147 G---------G
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9820 10 -     22811 GAT-GGGGAAG
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986216  2 +   2598838 a---------t
i Propithecus_coquerelli.NW_012148875.1                  I 349 C 0
s Propithecus_coronatus.k141_347390                          24505  2 +     38485 A---------T
i Propithecus_coronatus.k141_347390                      I 350 C 0
s Propithecus_diadema.k141_357118                              666  2 +      4256 A---------T
i Propithecus_diadema.k141_357118                        I 349 C 0
s Propithecus_edwardsi.k141_1176054                          22024  2 +     35766 A---------T
i Propithecus_edwardsi.k141_1176054                      I 349 C 0
s Propithecus_perrieri.k141_1200571                            207  2 -     24134 A---------T
i Propithecus_perrieri.k141_1200571                      N 0 C 0
s Propithecus_tattersalli.k141_790011                        24019  2 -     67325 A---------T
i Propithecus_tattersalli.k141_790011                    I 350 C 0
s Propithecus_verreauxi.k141_956661                            265  2 -      6182 A---------T
i Propithecus_verreauxi.k141_956661                      N 0 C 0
s Pteronotus_parnellii.KE909381.1                            11048  2 -     21811 A---------G
i Pteronotus_parnellii.KE909381.1                        C 0 I 12
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36519  2 +     42204 A---------G
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 8
s Pteropus_alecto.KB030862.1                              22973527  2 +  28871421 A---------G
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1464  2 -      8028 A---------G
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20262949  2 -  38429054 A---------G
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                              9643  2 -     91421 G---------G
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603777  2 +   7812017 G---------G
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9616  2 -     72585 G---------G
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        366762  2 -   3329780 G---------G
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             1029  2 -     11128 G---------G
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230406  2 - 195417433 G---------G
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7666114  2 +   7961872 G---------G
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84512  2 -     96226 A---------G
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151248  2 -    313613 A---------G
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 7
s Semnopithecus_entellus.k141_11662                          14158  2 -     19888 G---------G
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21363  2 +     39453 G---------G
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            1887  2 +     27826 G---------G
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1409  2 -     19483 G---------G
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1471  2 +      7198 G---------G
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9731  2 +     15514 G---------G
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187534  2 -    191337 A---------G
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 I 3
s Sorex_araneus.JH798187.1                                13646893  2 -  18376816 A---------G
i Sorex_araneus.JH798187.1                               C 0 I 18
s Spermophilus_dauricus.KZ294078.1                         1948068  2 -   3870691 a---------t
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27062  2 +     97271 A---------G
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 8
s Suricata_suricatta.SurSur_flattened_line_6629               7018  2 -    196729 G---------G
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   62882317  2 -  69701581 g---------g
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1087707  2 -   1523678 G---------G
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6666  2 +     41958 A---------G
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69298  2 +    116680 A---------T
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 6 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115039  2 -    156842 A---------G
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383494  2 +    539355 A---------G
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10490  2 +     70052 G---------G
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               14795  2 +     25099 G---------G
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422737  2 + 186847797 G---------G
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   1711  2 +      8208 A---------T
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78808  2 +    610378 A---------G
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 9
s Trachypithecus_auratus.k141_722599                          5468  2 -     20410 G---------G
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9660  2 +     15221 G---------G
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5568  2 +     19930 G---------G
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       1995  2 -     19997 G---------G
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42114  2 -     60166 G---------G
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9586  2 -     27529 G---------G
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9526  2 -     18194 G---------G
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3262  2 -     21137 G---------G
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    1964  2 -     10723 G---------G
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1117  2 +      9834 G---------G
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19435  2 +     32220 G---------G
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933532  2 +   6242583 G---------G
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2777  2 +     20839 G---------G
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    317  2 -      1748 A---------G
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 C 0
s Tupaia_chinensis.KB320699.1                              2149431  2 +   4065304 a---------t
i Tupaia_chinensis.KB320699.1                            I 1 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     3050  2 -     10553 A---------T
i Tupaia_tana.TupTan_flattened_line_97126                I 1 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737523  2 +  33153633 A---------G
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   51367  2 -     77625 A---------G
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 56
s Ursus_maritimus.KK499267.1                               4846762  2 -   5085361 A---------G
i Ursus_maritimus.KK499267.1                             C 0 I 8
s Vicugna_pacos.KN270157.1                                 5368224  2 -   5488506 t---------g
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7239  2 -     43706 C---------A
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 8
s Xerus_inauris.XerIna_scaffold_48378                        19562  2 -     24430 A---------T
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1687  2 +      2932 A---------G
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 I 8
s Zapus_hudsonius.ZapHud_scaffold_11398                       9840  2 +     63895 A---------T
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 3
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11215  2 +     12536 A---------G
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103042  5 +    114563 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Saiga_tatarica.SaiTat_scaffold_373180                       3225 222 +      4321 I
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4576 218 +     55207 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Petromus_typicus.PetTyp_scaffold_42190                     25702  5 -     29689 I
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1264036 222 -   2937107 I
e Ovis_canadensis.OviCan_scaffold_2572                      173103 222 -    191736 I
e Ovis_aries.CM001607.2                                   17584682 222 +  44047080 I
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144328 218 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Moschus_moschiferus.MosMos_scaffold_61429                  27091 222 -     27816 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19686  8 -    143317 I
e Heterocephalus_glaber.JH602082.1                        20659230  5 +  22651954 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17151 222 +     36099 I
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Fukomys_damarensis.KN121974.1                             848352  5 +   3816255 I
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       309953 220 +    607251 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 31329  8 -     42551 I
e Dinomys_branickii.DinBra_scaffold_21862                    34133 15 +     67921 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1072  5 +      3576 I
e Cuniculus_paca.CunPac_flattened_line_231100                 2683  8 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Chinchilla_lanigera.JH722012.1                           1248337 18 +   2543920 I
e Cavia_tschudii.CavTsc_scaffold_8919                        98442  5 +    143979 I
e Cavia_porcellus.DS562891.1                              18359567  5 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18347307  5 -  23392119 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18059667 222 -  44709034 I
e Capra_aegagrus.CM003241.1                               18828947 222 +  46296322 I
e Bubalus_bubalis.KI419123.1                               2818124 220 +   4408762 I
e Bos_taurus.CM000203.6                                   18082634 220 +  45695690 I
e Bos_mutus.JH880303.1                                     1124552 224 -   1948126 I
e Bos_indicus.CM003047.1                                  20271996 220 +  48749331 I
e Bison_bison.KN261452.1                                    198791 220 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    25751 222 +     34529 I
e Antilocapra_americana.AntAmePen_scaffold_12469             97280 223 -    100397 I
e Ammotragus_lervia.NIVO01071767.1                          674829 222 -   2318259 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                        677 59 +     62944 G--A----G--------------G------------A---A---GAAATG------------CCAC----------GTTAA---CT-GCCCCT----------GCTCT---ATT--G-TA------------CT---CAAAACTC------CTGCAGGTG
s Acinonyx_jubatus.LLWD01001279.1                           816802 63 -   1699592 G--T----GGCGG-TGA-GG---G--G---------G---CA---GAATG------------TTGC----------AGTAA---AT-ATCCAC----------TATTC---ATT--T-TA------------CT---AC------AA---ACTACTA---
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 6328
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506838 47 -  29979442 --------------------------------------------GGAATA------------CTAT----------AGTAA---AT-TTCCAT----------GTTGC---ATT--T-TA------------GT---AA------AA---ACTATTA---
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 75 C 0
s Ailurus_fulgens.LNAC01001112.1                             75061 47 -    347723 --------------------------------------------GGAATA------------CCAC----------AGTAA---AT-GTTCAT----------GTTGC---ATT--T-TA------------CT---AA------AA---ACTACTA---
i Ailurus_fulgens.LNAC01001112.1                         I 8 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64843 48 -     89534 ------------------------------------A---T---GAAATG------------CCAC----------AATAA---A--GTTTCT----------ATTGC---TTT--T-TA------------TT---CA------AA---ACTACTT---
i Allactaga_bullata.AllBul_scaffold_9566                 I 3 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9152 59 -     52922 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCCG----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9077 59 -     28001 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCCG----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9203 59 -      9772 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCCG----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            360 59 -     12518 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCCG----------GCTGT---ATC--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675051  2 -   2318259 -----------------------------------------------------------------------------------------------------------------------------------------------------------TA---
i Ammotragus_lervia.NIVO01071767.1                       I 222 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      182962 46 +    412891 ----------------------------------------T---AAAATG------------CCCT----------AGTAA---AT-ACTCAT----------GCTGC---ATT--C-TA------------TT---CA--------G-AACTAC-----
i Anoura_caudifer.AnoCau_scaffold_1412                   I 9 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97503  2 -    100397 -----------------------------------------------------------------------------------------------------------------------------------------------------------TA---
i Antilocapra_americana.AntAmePen_scaffold_12469         I 223 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7148 16 +     20879 --------------------------------------------------------------------------------------------------------------------T-TA------------CT---CA------AA---ACAACTC---
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 22 C 0
s Arctocebus_calabarensis.k141_288239                        14305 53 +     17124 A--A----G--------------G------------G---T---GAAATA------------CCAC----------AGTAC---AC-ATTCCC----------ACAGC---TTT--T-TA------------CCAGAAA------------CTACAA---
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2314 46 +     43469 ----------------------------------------T---AAAATG------------CCCT----------AGTAA---AT-ACTCAT----------GCTGC---ATC--C-TA------------TT---CA------AA---AGTAC-----
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 9 C 0
s Avahi_laniger.k141_765380                                  49147 52 -     92717 A--A----G--------------A------------G---T---GAAATG------------CCAC----------AGTAA---AT-GTTCCC----------ACTGG---TTT--T-TACTCAAAACT--ACT--------------------------
i Avahi_laniger.k141_765380                              C 0 I 1
s Avahi_peyrierasi.k141_1424874                              49772 52 +     85213 A--A----G--------------A------------G---T---GAAATG------------CCAC----------AGTAA---AT-GTTCCC----------ACTGG---TTT--T-TACTCAAAACT--ACT--------------------------
i Avahi_peyrierasi.k141_1424874                          C 0 I 1
s Balaenoptera_acutorostrata.KI537508.1                   15191381 57 +  23207421 G--G----AGGG-----------GAT----------G---T---GAAATG------------ACAC----------AGTAA---AT-GTTCAT----------GCTGC---ATT--T-TA------------CC---CA------AA----CTACTA---
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         1847 57 -     18090 G--G----AGGG-----------GAT----------G---T---GAAATG------------ACAC----------AGTAA---AT-GTTCAT----------GCTGC---ATT--T-TA------------CC---CA------AA----CTACTA---
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    25973  2 +     34529 -----------------------------------------------------------------------------------------------------------------------------------------------------------TA---
i Beatragus_hunteri.BeaHun_scaffold_50177                I 222 C 0
s Bison_bison.KN261452.1                                    199011  2 -    288883 -----------------------------------------------------------------------------------------------------------------------------------------------------------ta---
i Bison_bison.KN261452.1                                 I 220 C 0
s Bos_indicus.CM003047.1                                  20272216  2 +  48749331 -----------------------------------------------------------------------------------------------------------------------------------------------------------ta---
i Bos_indicus.CM003047.1                                 I 220 C 0
s Bos_mutus.JH880303.1                                     1124776  2 -   1948126 -----------------------------------------------------------------------------------------------------------------------------------------------------------ta---
i Bos_mutus.JH880303.1                                   I 224 C 0
s Bos_taurus.CM000203.6                                   18082854  2 +  45695690 -----------------------------------------------------------------------------------------------------------------------------------------------------------ta---
i Bos_taurus.CM000203.6                                  I 220 C 0
s Bubalus_bubalis.KI419123.1                               2818344  2 +   4408762 -----------------------------------------------------------------------------------------------------------------------------------------------------------TA---
i Bubalus_bubalis.KI419123.1                             I 220 C 0
s Camelus_bactrianus.KN276810.1                            9998737 60 -  17673402 a--g----g------gtggtgggg------------t---g---ggaatG------------ACAC----------AGTAA---AT-GTTCAT----------GCTGC---ATT--T-TA------------CC---CA------AA----CTGCTA---
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331201 60 -   7040546 a--g----g------gtggtgggg------------t---g---ggaatG------------ACAC----------AGTAA---AT-GTTCAT----------GCTGC---ATT--T-TA------------CC---CA------AA----CTGCTA---
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399477 60 -   1652518 a--g----g------gtggtgggg------------t---g---ggaatG------------ACAC----------AGTAA---AT-GTTCAT----------GCTGC---ATT--T-TA------------CC---CA------AA----CTGCTA---
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795625 47 -  60362399 --------------------------------------------GGAATG------------CCAC----------AGTAA---AT-GTTCAT----------GCTGC---ATT--T-TA------------CT---AA------AAG---CTACCA---
i CanFam4.chr16                                          I 8 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181682 47 -    185531 --------------------------------------------GGAATG------------CCAC----------AGTAA---AT-GTTCAT----------GCTGC---ATT--T-TA------------CT---AA------AAG---CTACCA---
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 8 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031069 47 -   9314153 --------------------------------------------GGAATG------------CCAC----------AGTAA---AT-GTTCAT----------GCTGC---ATT--T-TA------------CT---AA------AAG---CTACCA---
i Canis_lupus_dingo.QKWQ01000480.1                       I 8 C 0
s Canis_lupus_familiaris.chr16                            17955333 47 -  59632846 --------------------------------------------GGAATG------------CCAC----------AGTAA---AT-GTTCAT----------GCTGC---ATT--T-TA------------CT---AA------AAG---CTACCA---
i Canis_lupus_familiaris.chr16                           I 8 C 0
s Canis_lupus_orion.HG994398.1                            18496637 44 +  63665305 --------------------------------------------GGAATG------------CCAC----------AGTAA---AT-GTTCAT----------GCTGC---ATT--T-TA------------CT---AA------A------TACCA---
i Canis_lupus_orion.HG994398.1                           I 8 C 0
s Capra_aegagrus.CM003241.1                               18829169  2 +  46296322 -----------------------------------------------------------------------------------------------------------------------------------------------------------TA---
i Capra_aegagrus.CM003241.1                              I 222 C 0
s Capra_hircus.CM004588.1                                 18059889  2 -  44709034 -----------------------------------------------------------------------------------------------------------------------------------------------------------TA---
i Capra_hircus.CM004588.1                                I 222 C 0
s Carlito_syrichta.NW_007259797.1                           140877 54 -    496798 --------a--------------g------------a---t---gaaatG------------CCAT----------AGCAA---AG-ATTCCT----------GTTGC---TTT--T-TA------------CT---CT------AAGCTACTGCAG---
i Carlito_syrichta.NW_007259797.1                        C 0 I 1
s Carollia_perspicillata.CarPer_scaffold_92756                2732 46 -     11696 ----------------------------------------T---AAAATG------------CCCT----------AGTAA---AT-GCTCAT----------GCTGC---ACC--C-TA------------TT---CA------AA---ACTAC-----
i Carollia_perspicillata.CarPer_scaffold_92756           I 9 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133487 51 +    179628 A--A----G--------------A------------G---T---GA-ATG------------CCAC----------AATAA---AT-GTTCCT----------ATTGC---TTT--T-TA------------CT---CA------AA---ACTACT----
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89062 49 +    217609 -----------------------G------------A---T---GAAGTG------------ACAC----------AGTAA---AC-GTTTAT----------GGCCC---ACT--T-TA------------GC---TA------AA----CCGCTA---
i Catagonus_wagneri.CatWag_scaffold_2839                 I 3 C 0
s Cavia_aperea.AVPZ01000300.1                             18347312 45 -  23392119 -----------------------------------------------------------------taaaaatccacgataa---at-atttct----------a---t---tt--tt-tc------------ca---ca------AA---ATTACTA---
i Cavia_aperea.AVPZ01000300.1                            I 5 C 0
s Cavia_porcellus.DS562891.1                              18359572 45 -  23407841 -----------------------------------------------------------------taaaaatccacgataa---at-atttct----------a---t---tt--tt-tc------------ca---ca---------aaattaCTA---
i Cavia_porcellus.DS562891.1                             I 5 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98447 45 +    143979 -----------------------------------------------------------------TAAAAATCCACGATAA---AT-ATTTCT----------A---T---TT-T-T-TC------------CA---CA------AA---ATTACTA---
i Cavia_tschudii.CavTsc_scaffold_8919                    I 5 C 0
s Cephalopachus_bancanus.k141_2037105                         4793 54 -      8605 --------A--------------G------------A---T---GAAATG------------CCAT----------AGCAA---AG-ATTCCT----------GTTGC---TTT--T-TA------------CT---CA------AAGCTACTGCAG---
i Cephalopachus_bancanus.k141_2037105                    C 0 I 1
s Ceratotherium_simum.JH767749.1                          12227711 57 +  27778364 G--G----AGG-----A-G----G------------G---C---GAGATG------------CCAC----------AGTAA---AT-GTTCAC----------ACTGC---ATT--T-TA------------TT---CA------AA---ACTACTG---
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2429 57 -      3715 G--G----AGG-----A-G----G------------G---C---AAGATG------------CCAC----------AGTAA---AT-GTTCAC----------ACTGC---ATT--T-TA------------TT---CA------AA---ACTACTG---
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470121 59 +   4669795 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCCG----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8670 59 -     19203 G--A----G--------------G------------A---G---GAAATG------------CTAC----------GTTAA---AT-GCCCCG----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3089 59 +      8260 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCCG----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3319 59 +     27781 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCCG----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3465 59 -     20310 G--A----G--------------G------------A---G---GAAATG------------GCAC----------ATTAA---AT-GCCCCG----------GCTGT---ATT--G-TA------------TT---CAAACCTC------CTGCAGGTG
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6449 59 +     29689 G--A----G--------------G------------A---G---GAAATG------------GCAC----------ATTAA---AT-GCCCCG----------GCTGT---ATT--G-TA------------TT---CAAACCTC------CTGCAGGTG
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             802 59 +      9989 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCCG----------GCTGT---ATT--G-TA------------TT---CAAACCTC------CTGCAGGTG
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9137 59 -     27936 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCCG----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9156 59 -     11289 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCCG----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811532 59 +  39242232 G--A----G--------------G------------A---G---GAAATG------------GCAC----------ATTAA---AT-GCCCCG----------GCTGT---ATT--G-TA------------TT---CAAACCTC------CTGCAGGTT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217223 59 -  21565898 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCCG----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34343 59 -     53127 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCCG----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1635 59 +      7159 G--A----G--------------G------------A---G---GAAATG------------GCAC----------ATTAA---AT-GCCCCG----------GCTGT---ATT--G-TA------------TT---CAAACCTC------CTGCAGGTG
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9148 59 -     27947 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCCG----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9124 59 +     17596 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCCG----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39618 59 -     41420 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCCG----------GCTGT---ATT--G-TA------------TT---CAAACCTC------CTGCAGGTG
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4655 53 -      6351 G--G----G--------------A------------G---T---GAAATG------------CCAC----------AGTGA---GC-GTTCCC----------GCTGC---ATT--C-CC------------CT---CA------AA-C--CTGCTG---
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16566 52 -     52598 A--A----G--------------G------------G---T---GAAACG------------CCAC----------AGTAA---AT-GTTCCC----------GCTGG---TTT--T-TACTCAAAACTT--CT--------------------------
i Cheirogaleus_major.k141_333249                         C 0 I 1
s Cheirogaleus_medius.k141_1055463                           11915 52 +     57038 A--A----G--------------G------------G---T---GAAACG------------CCAC----------AGTAA---AT-GTTCCC----------GCTGG---TTT--T-TACTCAAAACTT--CT--------------------------
i Cheirogaleus_medius.k141_1055463                       C 0 I 1
s Chinchilla_lanigera.JH722012.1                           1248355 34 +   2543920 -----------------------------------------------------------------c----------aATAA---AT-AGTCTT----------A---T---TT---T-CT------------CA---CA------AA---ATGACTA---
i Chinchilla_lanigera.JH722012.1                         I 18 C 0
s Chlorocebus_aethiops.ctg25                              18423087 59 -  18827391 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCCG----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9530 59 -     50209 G--A----G--------------G------------A---G---GAAATG------------CAGC----------GTTAA---AT-GCCCCG----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416535 59 + 135778131 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCCA----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 14986 53 +     19366 A--A----G--------------A------------G---T---GAACTA------------TCAC----------AACAA---AC-ACTCCT----------GCTGT---GTT--T-CC------------CT---CA------AA---ACTACTA---
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170085 53 +    839153 A--A----G--------------A------------G---T---GAACTA------------TCAC----------AACAA---AC-ACTCCT----------GCTGT---GTT--T-CC------------CT---CA------AA---ACTACTA---
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_172426               9080 56 -     10935 A-AG----A-------A-G----A------------C---T---GAAAAA------------TTAC----------AGTAA---AC-ATGCCT----------GCAAC---ATT--T-TA------------TT---CA------AA---ATTGCTT---
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          C 0 C 0
s Colobus_angolensis.KN981557.1                            1905055 59 +   2368649 T--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCCG----------GCTGT---ATT--G-TA------------CG---CAAACCTC------CTGCAGGTG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944673 59 + 200372422 T--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCCG----------GCTGT---ATT--G-TA------------CC---CAAACCTC------CTGCAGGTG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31567 59 +     84244 T--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCCG----------GCTGT---ATT--G-TA------------CG---CAAACCTC------CTGCAGGTG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545830 48 -  53390261 ------------------------------------G---T---GAAATG------------TCAC----------AGTAA---AT-GTTTAT----------ACTGC---ATT--T-TA------------CT---CA------A-G--A-TACCA---
i Condylura_cristata.JH655891.1                          I 6 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10342 54 -     20389 G--G---CA-------AAG----G------------A---T----AAAAG------------CCAC----------AGTAA---AT-GTTTGT----------GTTGC---ATT--T-AA------------CT---TA------AA---ACTAC-----
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_109268              7416 57 +      9948 ------------------------------------G---T---ACACTA------------TAAC----------A---C-T-GT-GTTTTGGTTACTTTTGGTTAC---ATT--T-TA------------CT---TA------AA---ATAACTA---
i Crocidura_indochinensis.CroInd_scaffold_109268         I 56 I 56
s Cryptoprocta_ferox.CryFer_flattened_line_16129             17821 57 -     87169 G--C----GG-------------G--G---------G---T-GGACAATG------------TCTC----------AGTAA---CT-ACTCAC----------GATTC---ATT--T-TA------------CC---AA---------CAACTACTA---
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 6261
s Cuniculus_paca.CunPac_flattened_line_231100                 2691 50 +      5455 -----------------------------------------------------------------TAAAAAACCATGTTAA---AT-AGCTCT----------A---TCTTTTTTTT-TT------------CA---CG------AA---ATTACTG---
i Cuniculus_paca.CunPac_flattened_line_231100            I 8 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1077 47 +      3576 -----------------------------------------------------------------TGTAAAACCACGATAA---AC-ATTTTT----------A---T---TTTTTT-TT------------CA---CA------AA---ATTACTA---
i Dasyprocta_punctata.DasPun_flattened_line_206793       I 5 C 0
s Dasypus_novemcinctus.JH564415.1                            60899 53 +   2246927 A--G----G--------------A------------G---T---GAAATG------------CCAC----------AATAA---GC-ATTCCT----------GCTGC---ATT--T-CC------------CT---CA------AA---ACTACTA---
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532743 42 -  12879189 A--A----G--------------G------------G---T---GAAATG------------CCAC----------AGTAA---AT-GTTCCT----------GCTGC---TTT--T-TA------------CT--------------------------
i Daubentonia_madagascariensis.ctg71                     C 0 I 1
s Delphinapterus_leucas.KZ290073.1                        16811017 56 +  35494412 G--G----AGGG-----------GAT----------G---T---GAAATG------------ACAC----------AGTAA---AT-GTTCAT----------GCTGC---ATT--T-TA------------CC---CA------AA----CTACT----
i Delphinapterus_leucas.KZ290073.1                       C 0 I 1
s Desmodus_rotundus.KZ672289.1                             8627763 46 +  20541912 ----------------------------------------T---AAAATG------------CCCT----------AGTAA---AT-ACTCCC----------GCTGC---ATT--C-TA------------TT---CA------AA---ACTAC-----
i Desmodus_rotundus.KZ672289.1                           I 9 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669244 57 +   1390856 G--G----AGG-----A-G----G------------G---C---GAGATG------------CCAC----------AGTAA---AT-GTTCAC----------ACTGC---ATT--T-TA------------CT---CA------AA---ACTACTG---
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2319 57 +    198055 G--G----AGG-----A-G----G------------G---C---GAGATG------------CCAC----------AGTAA---AT-GTTCAC----------ACTGC---ATT--T-TA------------TT---CA------AA---ACTACTG---
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34148 34 +     67921 -----------------------------------------------------------------C----------AATAA---AT-AGTCCT----------A---T---AT---T-TT------------CA---CA------AA---ATGACTA---
i Dinomys_branickii.DinBra_scaffold_21862                I 15 C 0
s Dipodomys_ordii.KN672350.1                              18895646 53 +  37912305 a--a----g--------------a------------g---t---gAAATG------------GTGC----------AATAC---AT-ATTCCT----------ATTGC---TTT--T-TA------------CC---TG------AA---ATTGATC---
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  11856 53 +     14536 A--A----G--------------A------------G---T---GAATTG------------GTGC----------AATAC---AT-ATTCCT----------ATTGC---TTT--T-TA------------CC---TG------AA---ATTGATC---
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31337 45 -     42551 -----------------------------------------------------------------TAAAAATCCAAGATAA---AT-ACTTCT----------A---T---TT-T-T-CC------------CA---CA------AA---ATTACTA---
i Dolichotis_patagonum.DolPat_scaffold_30833             I 8 C 0
s Eidolon_helvum.KE759718.1                                   7257 58 +     11740 G--GTG--GGG-----A-G---TG------------G---T---GAAATG------------CTAC----------AGTAA---AT-GTTTGT----------GCTGC---ATT--T-TA------------CT---CA------AA---ACTAC-----
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310173  2 +    607251 -----------------------------------------------------------------------------------------------------------------------------------------------------------ta---
i Elaphurus_davidianus.JRFZ01104969.1                    I 220 C 0
s Elephantulus_edwardii.JH947257.1                         1088872 21 +  10337057 ----------------------------------------------------------------------------------------------------------GC---ATT--T-TA------------TT---CA------AA---ACTACTT---
i Elephantulus_edwardii.JH947257.1                       I 28 C 0
s Enhydra_lutris.KZ291758.1                               16325623 47 -  41312741 --------------------------------------------GGAATA------------CCAC----------AGTAA---AT-GTTCAT----------GTTGC---ATT--T-TA------------CT---AA------AA---ACTACTA---
i Enhydra_lutris.KZ291758.1                              I 8 C 0
s Eptesicus_fuscus.JH977646.1                              2143608 65 -  14770903 G--C----TGGGGGTGAAGGGGAT------------A---T---TAAATG------------CCAC----------AGTAA---AT-ATTCGT----------GCTGC---CTT--C-TA------------CT---CA------AA---ACTAC-----
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279586 57 +   4378816 G--G----AGGGG----------T------------G---T---GAAATG------------CCAC----------AGTAA---AC-GTTCGT----------GCAGC---ATT--T-TA------------CT---TG------AA---ACTGCTG---
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527407 57 -  39960074 G--G----AGGGG----------T------------G---T---GAAATG------------CCAC----------AGTAA---AC-GTTCGT----------GCGGC---ATT--T-TA------------CT---CG------AA---ACTGCTG---
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29422 57 +    498745 G--G----AGGGG----------T------------G---T---GAAATG------------CCAC----------AGTAA---AC-GTTCGT----------GCGGC---ATT--T-TA------------CT---CG------AA---ACTGCTG---
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3325201 51 -   7059049 ------------------------------------GTGAT---GACATA------------CCAC----------AGTAAA--GT-GTTACT----------GCTTC---ATT--T-TA------------CT---CA------AA---ATTAC-----
i Erinaceus_europaeus.JH835339.1                         I 5 C 0
s Erythrocebus_patas.Contig38                             21199766 59 -  21539334 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCCG----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10693 57 +    133382 G--G----AGGG-----------GAT----------G---T---GAAATG------------ACAC----------AGTAA---AT-GTTCAT----------GCTGC---ATT--T-TA------------CC---CA------AA----CTACTA---
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24630 57 -     44125 G--G----AGGG-----------GAT----------G---T---GAAATG------------ACAC----------AGTAA---AT-GTTCAC----------GCTGC---ATT--T-TA------------CC---CA------AA----CTACTA---
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.AANG03223880.1                                   357 63 +       572 G--T----GGCAG-AGA-GG---G--G---------G---CA---GAATG------------TTGC----------AGAAA---AT-ATTCAC----------TATTC---ATT--T-TA------------CT---AA------AA---ACTACTA---
i Felis_catus.AANG03223880.1                             I 247 n 0
s Felis_catus_fca126.CM031415.1                           20185232 63 + 205367284 G--T----GGCAG-AGA-GG---G--G---------G---CA---GAATG------------TTGC----------AGAAA---AT-ATTCAC----------TATTC---ATT--T-TA------------CT---AA------AA---ACTACTA---
i Felis_catus_fca126.CM031415.1                          C 0 I 6598
s Felis_nigripes.FelNig_flattened_line_125938                10346 63 -     11347 G--T----GGCAG-AGA-GG---G--G---------G---CA---GAATG------------TTGC----------AGAAA---AT-ATTCAC----------TATTC---ATT--T-TA------------CT---AA------AA---ACTACTA---
i Felis_nigripes.FelNig_flattened_line_125938            C 0 N 0
s Fukomys_damarensis.KN121974.1                             848357 36 +   3816255 -----------------------------------------------------------------t----------aataa---at-attcct----------a---t---ttt-tt-tt------------ca---ca---------aaactaCTA---
i Fukomys_damarensis.KN121974.1                          I 5 C 0
s Galagoides_demidoff.k141_31856                              3059 11 -      3432 --------------------------------------------gaaat----------------c----------attaa-------------------------------------------------------------------------------
i Galagoides_demidoff.k141_31856                         I 5 I 23
s Galeopterus_variegatus.GalVar_scaffold_56069               25303 53 +     26054 A--A----G--------------T------------G---C---AAAATG------------TCAC----------AGTAA---AT-GTACCT----------GCTGA---TTT--T-TA------------CT---TA------AA---ACTACTA---
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30193 53 +     49224 A--A----G--------------G------------G---T---AAAATA------------CCAT----------AATAA---AT-GTTCCT----------AATGC---TTT--T-TA------------CT---CA--------G-AACAGCTC---
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_2022027                               1329 56 +      3305 G--A----G--------------G------------A---A---GAAATG------------CCAC----------GTTAA---CT-GCCCCT----------GCTCT---ATT--G-TA------------CT---CAAAACTC------CTG-CAG--
i Gorilla_beringei.k141_2022027                          C 0 I 560
s Gorilla_gorilla.CYUI03002401.1                              5552 56 +      7071 G--A----G--------------G------------A---A---GAAATG------------CCAC----------GTTAA---CT-GCCCCT----------GCTCT---ATT--G-TA------------CT---CAAAACTC------CTG-CAG--
i Gorilla_gorilla.CYUI03002401.1                         C 0 I 630
s Graphiurus_murinus.GraMur_scaffold_10447                   29922 53 +     78134 A--A----T--------------G------------G---T---AAAATA------------CCAC----------AATAA---GT-GTTCCT----------ACTGC---TTT--T-TA------------CT---CA--------G-AACAGCTC---
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               230994 55 +    327341 --------CG-------------G--G---------G---T-GGGGAATG------------CCGC----------AGTAG---TT-ACCCAT----------GATTC---ATT--T-TA------------CT---AA------A-G--GCTACCG---
i Helogale_parvula.HelPar_flattened_line_2585            I 1 I 7006
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17373  2 +     36099 -----------------------------------------------------------------------------------------------------------------------------------------------------------TA---
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 222 C 0
s Heterocephalus_glaber.JH602082.1                        20659235 35 +  22651954 -----------------------------------------------------------------t----------aataa---at-attcct----------a---t---ttt--t-tt------------ca---ca---------aaattacTA---
i Heterocephalus_glaber.JH602082.1                       I 5 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                  69 57 +       961 ACAG----A--------------G------------A---TAACGAAATG------------CCAC----------AGTAA---AC-ACGCTT----------GTCAC---TGT--T-TA-------------T---CA------AA---ATGACTT---
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111873 57 +    128679 G--G----AGGG-----------GAT----------G---T---GAAATG------------ACAC----------AGTAA---AT-GTTCAT----------GCTGT---ATT--T-TA------------CC---CA------AA----CTACTA---
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108217 55 +   1711038 G--G--CAAGGG-----------G------------G---T---GAAACG------------CCAC----------AGTAA---AT-GTTCAC----------ACTGC---AT---T-TA------------CT---CA------AA---ACTAC-----
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39657 56 +     43066 G--T--CAA-------A-GCG--G------------G---T---GAAACG------------CCAC----------AGTAA---AT-CTTCAC----------ACTGC---AT---T-AA------------CT---CA------AA---ACTAC-----
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    429104 33 +    630532 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---CT-GCCCCT----------GCTC-----------------------------------------------------
i Hoolock_leuconedys.ctg274                                 C 0 I 16
s Hyaena_hyaena.HyaHya_flattened_line_26932                  33102 53 +     55795 G--C----AG-------------G--G---------G---T-GGGG-ATG------------CCGC----------AGTAA---AT-ATTCAC----------GAATT---GTT--T-TA------------CT---AC------AA---ACT---A---
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 7365
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19694 45 -    143317 -----------------------------------------------------------------TAAAAATCCACAATAA---AT-ATTTTT----------A---C---TT-T-T-TC------------CA---CA------AA---ATTACTA---
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 8 C 0
s Hylobates_agilis.k141_307679                               12022 33 -     15490 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---CT-GCCCCT----------GCTC-----------------------------------------------------
i Hylobates_agilis.k141_307679                           C 0 I 16
s Hylobates_klossii.k141_282416                              54027 33 +     67168 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---CT-GACCCT----------GCTC-----------------------------------------------------
i Hylobates_klossii.k141_282416                          C 0 I 16
s Hylobates_pileatus_b.LG02                                     189537474 33 - 191637585 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---CT-GCCCCT----------GCTC-----------------------------------------------------
i Hylobates_pileatus_b.LG02                                     C 0 I 16
s Hylobates_pileatus_a.tarseq_633                            3330572 33 -  11177569 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---CT-GCCCCT----------GCTC-----------------------------------------------------
i Hylobates_pileatus_a.tarseq_633                          C 0 I 16
s Hystrix_cristata.HysCri_scaffold_5660                      80760 53 +    135385 A--A----G--------------G------------G---T---GAAATG------------CCAC----------AATAA---AT-ATTTCT----------ATTAT---TTT--T-TT------------CA---TA------AA---ATTGTTA---
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514426 55 -   7955117 g--t----g--------------g------------g---t---aaAATG------------CCAT----------GATAAATAAT-GTCCCT----------ACTGC---TT---T-TA------------CT---CA------AA--T-CAACTC---
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   18004 52 +     31101 A--A----G--------------A------------G---T---GAAATG------------CCAC----------AGTAA---AT-GTTCCT----------GCTGG---TTT--T-TACTCAAAACT--ATT--------------------------
i Indri_indri.k141_3655594                               C 0 I 1
s Inia_geoffrensis.IniGeo_flattened_line_48101               22234 57 +     23964 G--G----AGGG-----------GAT----------G---T---GAAATG------------ACAC----------AGTAA---AT-GTTCAT----------GCTGC---ATT--T-TA------------CC---CA------AA----CTACTA---
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271211 49 -   9596543 ------------------------------------A---T---GAATTG------------CCAC----------AATAA---AT-GTTTCT----------ATTGC---TTT--T-TA------------TT---CA------AAG---CTACTT---
i Jaculus_jaculus.JH725527.1                             I 3 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1501 57 -      3359 G--G----AGGG-----------GAT----------G---T---GAAATG------------ACAC----------AGTAA---AT-GTTCAT----------GCTGC---ATT--T-TA------------CC---CA------AA----CTACTA---
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    11746 64 -     42476 G--C----AGGAGGTGGAGGG-AT------------A---T---TAAATG------------CCAC----------AGTAA---AT-ATGCAT----------GCTGC---ATG--C-TA------------CT---CA------AA---ACTAT-----
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6636 54 -     23766 A--A----G--------------G------------G---T---GAAATC------------CCAC----------AGTAA---AT-GTTCCC----------GCTGT----TT--TTTACTCAAAACTTCCCT--------------------------
i Lepilemur_ankaranensis.k141_596936                     C 0 I 1
s Lepilemur_dorsalis.k141_577674                             24583 54 +     45836 A--A----G--------------G------------G---T---GAAATC------------CCAC----------AGTAA---AT-GTTCCC----------GCTGT----TT--TTTACTCAAAACTTCCCT--------------------------
i Lepilemur_dorsalis.k141_577674                         C 0 I 1
s Lepilemur_ruficaudatus.k141_420445                         31493 55 -     32627 A--A----G--------------G------------G---T---GAAATC------------CCAC----------AGTAA---AT-GTTCCC----------GCTGT---TTT--TTTACTCAAAACTTCCCT--------------------------
i Lepilemur_ruficaudatus.k141_420445                     C 0 I 1
s Lepilemur_septentrionalis.k141_185316                      22641 54 +     54090 A--A----G--------------G------------G---A---GAAATC------------CCAC----------AGTAA---AT-GTTCCC----------GCTGT----TT--TTTACTCAAAACTTCCCT--------------------------
i Lepilemur_septentrionalis.k141_185316                  C 0 I 1
s Leptonychotes_weddellii.KB714746.1                       3035956 47 +   3914936 --------------------------------------------GGAATA------------CCAC----------AGTAA---AT-GTTCAT----------GTTGC---ATT--T-TA------------CT---AA------AA---ACTACTA---
i Leptonychotes_weddellii.KB714746.1                     I 8 C 0
s Lepus_americanus.LepAme_scaffold_107385                     3421 53 -     14121 A--A----C--------------T------------G---T---AAAATT------------CTAC----------AGTAA---AT-ATTCCT----------GATAC---TTT--T-TA------------CG---CA------AA---ATTACTT---
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             267315 57 -    662738 G--G----AGGG-----------GAT----------G---T---GAAATG------------ACAC----------AGTAA---AT-GTTCAT----------GCTGC---ATT--T-TA------------CC---CA------AA----CTACTA---
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1431290 59 +   1826925 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCCG----------GCTGT---GTT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             556 53 +     11245 A--A----G--------------G------------G---T---GAAATA------------CCAC----------AGTAC---AC-ATTCCC----------ACAGC---TTT--T-TA------------CTAGAAA------------CTACAA---
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999391 53 +   6120653 A--A----G--------------G------------G---T---GAAATA------------CCAC----------AGTAC---AC-ATTCCC----------ACAGC---TTT--T-TA------------CTAGAAA------------CTACAA---
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214342 55 -  43346337 A--G----G--------------A------------G---TGATAAAATG------------CCAC----------AGTAA---AT-ATGCCT----------GTTGC---ATT--T-TA-------------T---CA------AA---ACTACTT---
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951573 47 -  59628241 --------------------------------------------GGAATG------------CCAC----------AGTAA---AT-GTTCAT----------GCTGC---ATT--T-TA------------CT---AA------AAG---CTACCA---
i Lycaon_pictus.CM007581.1                               I 8 C 0
s Macaca_arctoides.k141_2326796                               1476 59 +     40492 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCCG----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670736 59 +  60120075 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCCG----------GCTGT---CTT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7234 59 -     26193 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAC---AT-GCCCCG----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75024 59 -    114318 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAC---AT-GCCCCG----------GCTGT---CTT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   747 59 -     23192 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCCG----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10196 59 -     29190 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCCG----------GCTGT---ATT--G-TG------------CT---CACACCTC------CTGCAGGTG
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18767 59 +     37952 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCCG----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833855 59 + 187317192 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCCG----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTg
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452413 59 -  25927173 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCCG----------GCTGT---ATT--G-TG------------CT---CACACCTC------CTGCAGGTG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74616 59 +     89720 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCTG----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1613 59 +     20474 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCCG----------GCTGT---CTT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1414 59 -     14993 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCCG----------GCTGT---ATT--G-TA------------CT---CACACCTC------CTGCAGGTG
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324283 59 -    668171 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCCG----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15556 59 -     15935 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCCG----------GCTGT---CTT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20353 59 -     45290 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCCG----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAAGTG
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87400 62 +     94391 G--GGG--AGGGGGT-A-G---TG------------G---T---GAAATG------------CTAT----------AGTAA---AT-GTTTGT----------GCTGC---ATT--T-TA------------CT---CA------AA---ACTAC-----
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23931906 59 -  24302211 G--A----G--------------G------------A---G---GAAATG------------CCTC----------GTTAA---AT-GCCCCG----------GCCGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346086 59 +    752769 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCCG----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15452 56 +    737560 G--G----AGGG-----------G------------G---T---GAAATG------------CCAC----------ACTAA---TT-GTTTAC----------CCTGC---ATT--T-TA------------TT---CA------AA---ACTACTA---
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              46841 56 -    317179 G--G----AGGG-----------G------------G---T---GAAATA------------CCAC----------TGTAA---TT-GTTTAC----------CCTGC---ATT--T-TA------------TT---CA------AA---ACTACTA---
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097279 52 -  40650429 g--t----a--------------a------------g---t---aaaatg------------cCAT----------GATAA---AT-GTCCCT----------ACTGC---TT---T-TA------------CT---CA------AA--T-CAACTC---
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6663 24 -    207569 G--A---CAGGG-----------A------------G---T---GAAAGG------------CCAC----------AGTA--------------------------------------------------------------------------------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 7
s Mellivora_capensis.MelCap_flattened_line_69365              6088 47 +     13704 --------------------------------------------GGAATA------------CCAC----------AGTAA---AT-GTTCAT----------GTTGC---ATT--T-TA------------CT---AA------AA---ACTATTA---
i Mellivora_capensis.MelCap_flattened_line_69365         I 8 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    2902 57 +     10310 G--G----AGGG-----------GAT----------G---T---GAAATG------------ACAC----------AGTAA---AT-GTTCAT----------GCTGC---ATT--T-TA------------CC---CA------AA----CTACTA---
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18283163 53 -  93316391 A--A----G--------------G------------G---T---GAAATA------------CCAC----------CATAA---ATTGTTCCT----------GATGG---TTT--T-TACTCAAAACTT--CT--------------------------
i Microcebus_murinus.CM007674.1                          C 0 I 1
s Microgale_talazaci.MicTal_scaffold_6613                    15308 57 -    145209 A-GG----G--------------AATGGAAGAAAATG---T---GAAACA------------CCAC----------AGCAA---AT-GTGTCTCT-AAT----CTTTC---ATT--C-T-----------------------------------------
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 9
s Micronycteris_hirsuta.MicHir_scaffold_52381                13274 46 -     19307 ----------------------------------------T---AAAATG------------CCCT----------AGTAA---AT-ACTCAT----------GCTGC---ATT--C-TA------------TT---CA------AA-C--CCAC-----
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 9 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1848698 61 +   8254450 G--C----GGGTGG-G--GGG-AT------------G---T---TAAATG------------CCAC----------AGTAA---AT-ATTCAT----------GCTGC---ATT--C-TA------------CT---CA------AA---ACTAC-----
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32567 61 +     64694 G--C----GGGTGG-G--GGG-AT------------G---T---TAAATG------------CCAC----------AGTAA---AT-ATTCAT----------GCTGC---ATT--C-TA------------CT---CA------AA---ACTAC-----
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3643 59 -     28506 G--A----G--------------G------------A---G---GAAATG------------CCAT----------GTTAA---AT-GCCCCA----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62286 47 -     63350 --------------------------------------------GGAATA------------CCAC----------AGTAA---AT-GTTCAT----------GTTGC---ATT--T-TA------------CT---AA------AA---ACTACTA---
i Mirounga_angustirostris.MirAng_flattened_line_22144    I 8 C 0
s Mirza_zaza.k141_952172                                      4518 53 -     37649 A--A----G--------------G------------G---T---GAAATG------------CCAC----------AGTAA---ATTGTTCCT----------GCTGG---TTT--T-TACT-AAAAATT-TCT--------------------------
i Mirza_zaza.k141_952172                                 C 0 I 1
s Monodon_monoceros.MonMon_M_scaffold_103                    26407 56 -    437263 G--G----AGGG-----------GAT----------G---T---GAAATG------------ACAC----------AGTAA---AT-GTTCAT----------GCTGC---ATT--T-TA------------CC---CA------AA----CTACT----
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 1
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137680 46 -    366855 ----------------------------------------T---AAAATG------------CCCT----------AGTCA---AC-AGTCAC----------ACCGC---CTT--C-CA------------GT---CA------AA---ACTGC-----
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 9 C 0
s Moschus_moschiferus.MosMos_scaffold_61429                  27313  2 -     27816 -----------------------------------------------------------------------------------------------------------------------------------------------------------TA---
i Moschus_moschiferus.MosMos_scaffold_61429              I 222 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   24183 57 +     37127 G--T----GG-------------G--G---------G---T-GGGGAATG------------CCGC----------AGTAA---CT-ACCTAT----------GATTC---ATT--T-TA------------CT---AA------AAG---CTACTG---
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 7016
s Murina_feae.MurFea_scaffold_85699                           4757 63 +     14753 G--C----GGGGGGTGGAGGGGAT------------A---T---TAAATG------------CCAC----------AGTAA---AT-ATTCAT----------GCTGC---ATT--C-TA------------CT---CA------A-----CTAC-----
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2188 51 +     14296 A--A----G--------------G------------G---T---AAA--G------------CCAC----------ATTGA---AT-GCTTCC----------ATTGC---TTT--T-TA------------CT---CA------GA-C--CAGCTC---
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               297507 58 -  14710649 --------------------------------------------gtaaa-tgttcagtaaatgaaC----------AGTAA---AT-GTTCAT----------GTTGC---ATC--T-TA------------CT---AA------AA---ACTACTA---
i Mustela_putorius.JH418006.1                            I 8 C 0
s Myotis_brandtii.KE162005.1                                277865 65 -  10118263 G--C----ATGGGGTGGAGGGGAT------------A---T---TAAATG------------CCAC----------AGTAA---AT-ATTCAT----------GCTGC---ATT--C-TA------------CT---CA------AA---ACTAC-----
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585436 65 -   6019432 G--C----ATGGGGTGGAGGGAAT------------A---T---TAAACG------------CCAC----------AGTAA---AT-ATTCAT----------GCTGC---ATT--C-TA------------CT---CA------AA---ACTAC-----
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3901653 65 -   4330536 G--C----GTGGGGTGGAGGGGAT------------A---T---TAAACG------------CCAC----------AGTAA---AT-ATTCAT----------GCTGC---ATT--C-TA------------CT---CA------AA---ACTAC-----
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32202 65 +     33610 G--C----GTGGGGTGGAGGGGAT------------A---T---TAAACG------------CCAC----------AGTAA---AT-ATTCAT----------GCTGC---ATT--C-TA------------CT---CA------AA---ACTAC-----
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              185938 52 +    196477 A--G----A--------------A------------G---T---GAAATG------------CCAC----------AATAA---AC-ATC-CT----------TGTGT---GTT--T-CA------------CT---CA------AA---ACTATTA---
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025356 53 -   3037898 A--A----G--------------G------------A---T---GATATA------------TCAC----------AATAA---AT-GTTTCT----------GTTGA---TTT--T-TA------------CT---CA------AA---ACTACTT---
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                                9656 59 +     21681 T--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GTCCCA----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865363 57 +   7148211 G--G----AGGG-----------GAT----------G---T---GAAATG------------ACAC----------AGTAA---AT-GTTCAT----------GCTGC---ATT--T-TA------------CC---CA------AA----CTACTA---
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756243 48 +    783361 -----------------------G------------G---T---AGAATG------------CCAT----------AGTAA---AT-ATTCAT----------GCTGC---CTT--C-TA------------TT---CA------AAG---CCTC-----
i Noctilio_leporinus.NocLep_scaffold_251                 I 14 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145834 47 -   9404916 --------------------------------------------GGAATG------------CCAC----------AGTAA---AT-GTTCAT----------GCTGC---ATT--T-TA------------CT---AA------AAG---CTACCA---
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 8 C 0
s Nycticebus_bengalensis.LG01                            102574360 53 - 196305487 A--A----G--------------G------------G---T---GAAATA------------CCAC----------AGAAC---AC-ATTCCC----------ACAGC---TTT--T-TA------------CTAGAAA------------CTACAA---
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2046 53 +      8486 A--A----G--------------G------------G---T---GAAATA------------CCAC----------AGAAC---AC-ATTCCC----------ACAGC---TTT--T-TA------------CTAGAAA------------CTACAA---
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744787 53 + 199412804 A--A----G--------------G------------G---T---GAAATA------------CCAC----------AGAAC---AC-ATTCCC----------ACAGC---TTT--T-TA------------CTAGAAA------------CTACAA---
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355297 15 +   3988456 A--A----T--------------A------------C---T---AAAATT------------TCA-----------------------------------------------------------------------------------------------
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              500575 47 -   2017862 --------------------------------------------GGAATA------------CCAC----------AGTAA---AT-GTTCAT----------GTTGC---ATT--T-TA------------CT---AA------AAG---CTACTA---
i Odobenus_rosmarus.KB229312.1                           I 8 C 0
s Odocoileus_virginianus.KZ100018.1                         144546  2 +    630418 -----------------------------------------------------------------------------------------------------------------------------------------------------------ta---
i Odocoileus_virginianus.KZ100018.1                      I 218 C 0
s Orcinus_orca.KB316932.1                                  2781278 57 -  10937097 G--G----AGGG-----------GAT----------G---T---GAAATG------------ACAC----------AGTAA---GT-GTTCAT----------GCTGC---ATT--T-TA------------CC---CA------AA----CTACTA---
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6668 54 -     18566 A-GG----G--------------A------------G---T---GAAATG------------CCAT----------ATTAA---AC-ATGCTT----------GTTGC---ATT--C-TG------------TT---TA------AA---ACTATTT---
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67144263 53 + 174332312 A--A----T--------------T------------G---T---GAAATT------------CTAC----------AGTAA---AT-ATTCCT----------GATAC---TTT--T-TA------------CT---CA------AA---ATTACTT---
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458588 47 -    559221 --------------------------------------------GGAATG------------CCAC----------AGTAA---AT-GTTCAT----------GCTGC---ATT--T-TA------------CT---AA------AAG---CTACCA---
i Otocyon_megalotis.JAEUCK010005147.1                    I 8 C 0
s Ovis_aries.CM001607.2                                   17584904  2 +  44047080 -----------------------------------------------------------------------------------------------------------------------------------------------------------TG---
i Ovis_aries.CM001607.2                                  I 222 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173325  2 -    191736 -----------------------------------------------------------------------------------------------------------------------------------------------------------TA---
i Ovis_canadensis.OviCan_scaffold_2572                   I 222 C 0
s Pan_paniscus.KQ411613.1                                    36039 59 +     80009 G--C----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---CT-GCCCGT----------GCTCT---ATT--G-TA------------CT---CAAAACTC------CTGCAGGTG
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189136991 59 + 189151597 G--A----G--------------G------------A---A---GAAATG------------CCAC----------GTTAA---CT-GCCCCT----------GCTCT---ATT--G-TA------------CT---CAAAActc------ctgcaggtg
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  140442 63 +    230217 G--T----GGCGG-TGA-GG---G--G---------G---CA---GAATG------------TTGC----------AGTAA---AT-ATTCAC----------TATTC---ATT--T-TA------------CT---AA------AA---ACTACTA---
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 6535
s Panthera_pardus.KV860321.1                                251971 63 +  18783137 G--T----GGCGG-TGA-GG---G--G---------G---CA---GAATG------------TTGC----------AGTAA---AT-ATTCAC----------TATTC---ATT--T-TA------------CT---AA------AA---ACTACTA---
i Panthera_pardus.KV860321.1                             C 0 I 7715
s Panthera_tigris.KE722367.1                               4710416 63 -   8748460 G--T----GGCGG-TGA-GG---G--G---------G---CA---GAATG------------TTGC----------AGTAA---AT-ATTCAC----------TATTC---ATT--T-TA------------CT---AA------AA---ACTACTA---
i Panthera_tigris.KE722367.1                             C 0 I 6417
s Pantholops_hodgsonii.KE114653.1                          1264258  2 -   2937107 -----------------------------------------------------------------------------------------------------------------------------------------------------------TC---
i Pantholops_hodgsonii.KE114653.1                        I 222 C 0
s Papio_anubis.CM001495.2                                183437230 59 + 183742232 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCCG----------GCTGT---GTT--G-TA------------CT---CAAACCTC------CTGCAGGCG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1292 59 +     20448 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCCG----------GCTGT---GTT--G-TA------------CT---CAAACCTC------CCGCAGGCG
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20557914 59 +  20919399 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCCG----------GCTGT---GTT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                     35 59 +     41871 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCCG----------GCTGT---GTT--G-TA------------CT---CAAACCTC------CTGCAGGCG
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     3324 59 +     27711 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCCG----------GCTGT---GTT--G-TA------------CT---CAAACCTC------CTGCAGGCG
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  3313 59 +      9205 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCCG----------GCTGT---GTT--G-TA------------CT---CAAACCTC------CCGCAGGCG
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      1243 65 -     78924 G--C----GGGG-TTG--GGG--G--G---------G---TA-GGGAATG------------CCAG----------AGTAA---AT-ATCCAC----------AATGC---ATT--T-TA------------CT---AA------AA---ACTACTA---
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 7468
s Perodicticus_ibeanus.k141_855320                            4538 53 +     13100 A--A----G--------------G------------G---T---GAAATA------------CCAC----------AGTAC---AC-ATTCCC----------ACAGA---TTT--T-TA------------TTAGAAA------------CTACAA---
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             2906 53 +     25941 A--A----G--------------G------------G---T---GAAATA------------CCAC----------AGTAC---AC-ATTCCC----------ACAGA---TTT--T-TA------------TTAGAAA------------CTACAA---
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25202 53 +     32600 A--A----A--------------A------------T---T---GAAATG------------GTGT----------GGTGC---AT-ATTCCT----------ATTAC---ATT--T-TA------------CC---AA------AA---ACTGATA---
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 I 1
s Petromus_typicus.PetTyp_scaffold_42190                     25707 33 -     29689 -----------------------------------------------------------------T----------AATAA---AC-ATTGTT----------A---T---T----T-TT------------CA---CA------AAG---TGACTA---
i Petromus_typicus.PetTyp_scaffold_42190                 I 5 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8325 57 +     63832 G--G----AGGG-----------GAT----------G---T---GAAATG------------ACAC----------AGTAA---AT-GTTCAT----------GCTGC---ATT--T-TA------------CC---CA------AA----CTACTA---
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38173 58 +     62158 T--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCC-----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        32900 58 +     89929 T--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCC-----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34316 58 +     51399 T--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCC-----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290537 58 -  14605196 T--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCC-----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_7723             79223 65 +     79650 G--C----CGGGGGTGGAGGGGAT------------A---T---TCAATG------------CCAC----------AGTAA---AT-ATTCAT----------GCTGC---ATT--C-TA------------CT---CA------AA---ACTAC-----
i Pipistrellus_pipistrellus.PipPip_scaffold_7723         C 0 N 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34031 57 +     35617 G--G----AGGG-----------GAT----------G---T---GAAATG------------ACAC----------AGTAA---AT-GTTCAT----------GCTGC---ATT--T-TA------------CC---CA------AA----CTACTA---
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189125077 59 + 189387572 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---CT-GCCCCT----------GCTCT---ATT--G-TA------------CT---CAAAActc------ctgcaggtg
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9564920 59 +   9816681 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---CT-GCCCCT----------GCTCT---ATT--G-TA------------CT---CAAAACTC------CTGCAGGTG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               67816 59 -     81375 T--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GTCCCA----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9643 59 +     10147 T--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GTCCCA----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9830 57 -     22811 ACAG----A--------------G------------A---TAACGAAATG------------CCAC----------AGTAA---AC-ACACTT----------GTCAC---TGT--T-TA-------------T---CA------AA---ATGACTT---
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986218 52 +   2598838 a--a----g--------------a------------g---t---GAAATG------------CCAC----------AGTAA---AT-ATTCCC----------ACTGG---TTT--T-TACTCAACACT--ACT--------------------------
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 1
s Propithecus_coronatus.k141_347390                          24507 52 +     38485 A--A----G--------------A------------G---T---GAAATG------------CCAC----------AGTAA---AT-ATTCCC----------ACTGG---TTT--T-TACTCAACACT--ACT--------------------------
i Propithecus_coronatus.k141_347390                      C 0 I 1
s Propithecus_diadema.k141_357118                              668 52 +      4256 A--A----G--------------A------------G---T---GAAATG------------CCAC----------AGTAA---AT-GTTCCC----------ACTGG---TTT--T-TACTCAAAACT--ACT--------------------------
i Propithecus_diadema.k141_357118                        C 0 I 1
s Propithecus_edwardsi.k141_1176054                          22026 52 +     35766 A--A----G--------------A------------G---T---GAAATG------------CCAC----------AGTAA---AT-GTTCCC----------ACTGG---TTT--T-TACTCAAAACT--ACT--------------------------
i Propithecus_edwardsi.k141_1176054                      C 0 I 1
s Propithecus_perrieri.k141_1200571                            209 52 -     24134 A--A----G--------------A------------G---T---GAAATG------------CCAC----------AGTAA---AT-GTTCCC----------ACTGG---TTT--T-TACTCAAAACT--ACT--------------------------
i Propithecus_perrieri.k141_1200571                      C 0 I 1
s Propithecus_tattersalli.k141_790011                        24021 52 -     67325 A--A----G--------------A------------G---T---GAAATG------------CCAC----------AGTAA---AT-GTTCCC----------ACTGG---TTT--T-TACTCAAAACT--ACT--------------------------
i Propithecus_tattersalli.k141_790011                    C 0 I 1
s Propithecus_verreauxi.k141_956661                            267 51 -      6182 A--A----G--------------A------------G---T---GAAATG------------CCAC----------AGTAA---AT-GTTCCC----------ACTG----CTT--T-TACTCAAAACT--ACT--------------------------
i Propithecus_verreauxi.k141_956661                      C 0 I 1
s Pteronotus_parnellii.KE909381.1                            11062 46 -     21811 ----------------------------------------T---AAAATG------------CCCT----------AGTAA---AT-AGTCAC----------ACTGC---ATT--C-TA------------CT---CA------AA---ACTAC-----
i Pteronotus_parnellii.KE909381.1                        I 12 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36529 46 +     42204 --------------------------------------------GGAACA------------CCAC----------AGTAA---AT-GTTCAT----------GTTGC---ATT--T-TA------------CT---AA------AA---ACTACT----
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 8 I 1
s Pteropus_alecto.KB030862.1                              22973529 56 +  28871421 G--G--TTGGGG-----------G------------G---T---GAAATG------------CTAC----------AGTAA---AT-GTTCAT----------GCTGC---ATT--T-TA------------CT---CA------AA---ACTAC-----
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1466 56 -      8028 G--G--TTGGGG-----------G------------G---T---GAAATG------------CTAC----------AGTAA---AT-GTTTGT----------GCTGC---ATT--T-TA------------CT---CA------AA---ACTAC-----
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20262951 63 -  38429054 G--T----GGCGG-TGA-GG---G--G---------G---CA---GAATG------------TTGC----------AGTAA---AT-ATTCAC----------TATTC---ATT--T-TA------------CT---AA------AA---ACTACTA---
i Puma_concolor.QAVW01001104.1                           C 0 I 7193
s Pygathrix_cinerea.k141_1153803                              9645 59 -     91421 T--A----G--------------G------------A---G---GAAATG------------CCAT----------GTTAA---AT-GTCCCA----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603779 59 +   7812017 T--A----G--------------G------------A---G---GAAATG------------CCAT----------GTTAA---AT-GTCCCA----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9618 59 -     72585 T--A----G--------------G------------A---G---GAAATG------------CCAT----------GTTAA---AT-GTCCCA----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4794  2 +     55207 -----------------------------------------------------------------------------------------------------------------------------------------------------------TA---
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 218 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        366764 54 -   3329780 G--GTG--AGG------------G------------G---T---GAAATC------------TCAC----------AGTAA---AT-GTTCAC----------A-TGC---ATT--T-TA------------CT---CA------AA---ACCAT-----
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             1031 59 -     11128 T--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GTCCCG----------GCTGT---ACT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230408 59 - 195417433 T--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GTCCCG----------GCTGT---ACT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7666116 59 +   7961872 T--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GTCCCG----------GCTGT---ACT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84514 56 -     96226 G--GTG--GGG-----------CA------------G---T---GAAATG------------CTAC----------AGTAA---AT-GTTTGT----------GCTGC---ATT--T-TA------------CT---CA------AA---ACTAC-----
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3447  2 +      4321 -----------------------------------------------------------------------------------------------------------------------------------------------------------TA---
i Saiga_tatarica.SaiTat_scaffold_373180                  I 222 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151257 44 -    313613 ------------------------------------G---T---GAAACA------------TCAC----------C--------A-GTTCAT----------ACTGT---ATT--T-TA------------CT---CA------AA---ACTACCA---
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 7 C 0
s Semnopithecus_entellus.k141_11662                          14160 59 -     19888 T--A----G--------------G------------A---G---GAAATG------------CCAT----------GTTAA---AT-GTCCCA----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21365 59 +     39453 T--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GTCCCA----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            1889 59 +     27826 T--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GTCCCA----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1411 59 -     19483 T--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GTCCCA----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1473 59 +      7198 T--A----G--------------G------------A---G---GAAATG------------CCAT----------GTTAA---AT-GTCCCA----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9733 59 +     15514 T--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GTCCCA----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187539 48 -    191337 ------------------------------------G---G---AAAACA------------CC-C----------AGTAA---AT-GTTCAT----------GCTGC---ATT--T-TA------------CT---CA------AA-C--TTACTA---
i Solenodon_paradoxus.SolPar_flattened_line_5840         I 3 C 0
s Sorex_araneus.JH798187.1                                13646913 28 -  18376816 -----------------------------------------------------------------------------------------TTGT----------GCTAC---AAT--T-TA------------CT---TA------AA---ATCATTG---
i Sorex_araneus.JH798187.1                               I 18 C 0
s Spermophilus_dauricus.KZ294078.1                         1948070 52 -   3870691 g--t----g--------------g------------g---t---aaaATG------------CCAT----------GATAA---AT-GTCCCT----------ACTGC---TT---T-TA------------CT---CA------AA--T-CAACTC---
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27072 47 +     97271 --------------------------------------------GGAATA------------CCAC----------AATAA---AT-GTTCAT----------GTTGC---ATT--T-TA------------CT---AA------AA---ACTGCTA---
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 8 C 0
s Suricata_suricatta.SurSur_flattened_line_6629               7020 56 -    196729 G--C----TG-------------G--G---------G---T--GGGAATG------------CTGC----------AGTAA---CT-ACTCAT----------GATTC---ATT--T-TA------------CT---AA------AAG---CTACCG---
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 7049
s Sus_scrofa.CM000828.4                                   62882319 55 -  69701581 g--a----a-----------gggg------------g---t---GAAAAT------------ACAC----------AGTAA---AT-GTTCAT----------GCCCC---ATT--T-TA------------CC---TA------AA----CTACTA---
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1087709 59 -   1523678 G--A----G--------------G------------A---G---GAAATG------------CCAA----------GTTAA---CT-GCCCCT----------GCTCT---ATT--G-TA------------CT---CAAAACTC------CTGCAGGTG
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6668 56 +     41958 G--G----GGG-----A-GG---G------------G---T---AAAATG------------CCAC----------CGTAA---AT-ATTCAT----------GCTGC---ATT--C-TA------------CT---CA------AA---AATAC-----
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69300 52 +    116680 A--G----A--------------A------------G---T---GAAATG------------CCAC----------AATAA---AC-ATC-CT----------TGTGT---GTT--T-TA------------CC---CA------AA---ACTATTA---
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115041 57 -    156842 G--G----AGGGG----------T------------G---T---GAAACA------------CCAC----------AGTCA---AT-GTTCAT----------GCTGC---ATT--T-TA------------CT---CA------AA---ACTACTA---
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383496 57 +    539355 G--G----AGGGG----------T------------G---T---GAAATG------------CCAC----------GGTAA---AT-GTTCAT----------GCTGC---ATT--T-TA------------CT---CA------AA---ACTACTA---
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10492 54 +     70052 --------A--------------G------------A---T---GAAATG------------CCAT----------AGCAA---AT-ATTCGT----------GTTGC---TTT--T-TA------------CT---CA------AAGCTACTGCAG---
i Tarsius_lariang.k141_2201908                           C 0 I 1
s Tarsius_wallacei.k141_780063                               14797 54 +     25099 --------A--------------G------------A---T---GAAATG------------CCAT----------AGCAA---AT-ATTCGT----------GTTGC---TTT--T-TA------------CT---CA------AAGCTACTGCAG---
i Tarsius_wallacei.k141_780063                           C 0 I 1
s Theropithecus_gelada.CM009954.1                        186422739 59 + 186847797 G--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GCCCCG----------GCTGT---GTT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103047 33 +    114563 -----------------------------------------------------------------C----------AAAAA---AT-ATTGTT----------A---T---T----T-TT------------CA---CA------AA---ATGATTA---
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 5 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   1713 53 +      8208 A--A----G--------------A------------G---T---GAAATG------------CCAC----------AGTAA---GC-ATTCCT----------GCTAC---ATT--T-CC------------CT---CA------AA--T-CTGCCG---
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78819 46 +    610378 ----------------------------------------T---AAAACA------------CCCT----------AGTAA---CT-ATTCAT----------GCTGC---ATC--C-TA------------TT---CA------AA---AGGAC-----
i Tonatia_saurophila.TonSau_scaffold_294                 I 9 C 0
s Trachypithecus_auratus.k141_722599                          5470 59 -     20410 T--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GTCCCA----------GATGT---ATT--G-TA------------CT---CAAACCTC------CTGCATGTG
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9662 59 +     15221 T--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GTCCCA----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCATGTG
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5570 59 +     19930 T--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GTCCCA----------GATGT---ATT--G-TA------------CT---CAAACCTC------CTGCATGTG
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       1997 59 -     19997 T--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GTCCCA----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42116 59 -     60166 T--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GTCCCA----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9588 59 -     27529 T--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GTCCCA----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9528 59 -     18194 T--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GTCCCA----------GCTGT---ATT--G-TA------------GT---CAAACCTC------CTGCAGGTG
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3264 59 -     21137 T--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GTCCCA----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    1966 59 -     10723 T--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GTCCCA----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1119 59 +      9834 T--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GTCCCA----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCATGTG
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19437 59 +     32220 T--A----G--------------A------------A---G---GAAATG------------CCAC----------GTTAA---AT-GTCCCA----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933534 59 +   6242583 T--A----G--------------A------------A---G---GAAATG------------CCAC----------GTTAA---AT-GTCCCA----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCATGTG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2779 59 +     20839 T--A----G--------------G------------A---G---GAAATG------------CCAC----------GTTAA---AT-GTCCCA----------GCTGT---ATT--G-TA------------CT---CAAACCTC------CTGCAGGTG
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    319 56 -      1748 G--G----AGGG-----------TAT----------G---T---GCAAGG------------ATAC----------AGTCA---AT-ACTCAT----------GCTGC---ATT--T-TA------------C----CA--------G--ATTACCA---
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 C 0
s Tupaia_chinensis.KB320699.1                              2149433 52 +   4065304 g--a----g--------------g------------g---a---gaaatg------------cCAC----------AGTCA---AT-GCTCCA----------GAAGC---TTT--T-TA------------CT---CA---------CAACTACT----
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     3052 52 -     10553 G--A----G--------------G------------G---T---GAAATG------------CCAC----------AGTAA---AT-GCTCCA----------GAAGC---TTT--T-TA------------CT---CA---------CAACTACT----
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737525 57 +  33153633 G--G----AGGG-----------GAT----------G---T---GAAATG------------ACAC----------AGTAA---GT-GTTTAT----------GCTGC---ATT--T-TA------------CC---CA------AA----CTACTA---
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_97021                    1755 46 -      4736 ------------------------------------G---T---GCAATG------------CCAC----------AGCAA---AT-ACTCTT-------------GC---ATT--T-TA------------CT---CA------AA---ACTACCA---
i Uropsilus_gracilis.UroGra_scaffold_97021               I 63 I 1
s Ursus_maritimus.KK499267.1                               4846772 47 -   5085361 --------------------------------------------GGAATA------------CTAC----------AGTAA---AT-TTCCCT----------GTTGC---ATT--T-TA------------GT---AA------AA---ACTACTA---
i Ursus_maritimus.KK499267.1                             I 8 C 0
s Vicugna_pacos.KN270157.1                                 5368226 60 -   5488506 a--g----g------gtggtgggg------------t---g---ggaatg------------ACAC----------AGTAA---AT-GTTCAT----------GCTGC---ATT--T-TA------------CC---CA------AA----CTGCTA---
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7249 47 -     43706 --------------------------------------------GGAGTG------------CCAC----------AGTAA---AT-GTTCAT----------GCTGC---ATT--T-TA------------CT---AA------AAG---CTACCA---
i Vulpes_lagopus.VulLag_flattened_line_30954             I 8 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19564 53 -     24430 G--T----G--------------A------------G---T---AAAATG------------CCAC----------AGTAA---AT-GTCCCT----------ACTGT---TTT--T-TA------------CT---CA------AA---ATAACTC---
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1697 47 +      2932 --------------------------------------------GGAATA------------CCAC----------AGTAA---AT-GTTCAT----------GTTGC---ATT--T-TA------------CT---AA------AA---ACTACTA---
i Zalophus_californianus.ZalCal_flattened_line_63728     I 8 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9845 49 +     63895 ------------------------------------A---T---GAAATT------------CCAC----------AGGAA---AT-GTTTCT----------GTTGC---TTT--C-TA------------TT---CA------AA---ACTACTT---
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 3 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11217 57 +     12536 G--G----AGGG-----------GAT----------G---T---GAAATG------------ACAC----------AGTAA---AT-GTTCAT----------GCTGC---ATT--T-TA------------CC---CA------AA----CTACTA---
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                        736 1 +     62944 C
s Acinonyx_jubatus.LLWD01001279.1                           823193 1 -   1699592 g
i Acinonyx_jubatus.LLWD01001279.1                        I 6328 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506885 1 -  29979442 T
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             75108 1 -    347723 T
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9211 1 -     52922 C
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9136 1 -     28001 C
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9262 1 -      9772 C
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            419 1 -     12518 C
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675053 1 -   2318259 T
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97505 1 -    100397 T
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7164 1 +     20879 T
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14358 1 +     17124 T
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Avahi_laniger.k141_765380                                  49200 1 -     92717 T
i Avahi_laniger.k141_765380                              I 1 C 0
s Avahi_peyrierasi.k141_1424874                              49825 1 +     85213 T
i Avahi_peyrierasi.k141_1424874                          I 1 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191438 1 +  23207421 A
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         1904 1 -     18090 A
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    25975 1 +     34529 T
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    199013 1 -    288883 T
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20272218 1 +  48749331 T
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1124778 1 -   1948126 T
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18082856 1 +  45695690 T
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2818346 1 +   4408762 T
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998797 1 -  17673402 A
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331261 1 -   7040546 A
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399537 1 -   1652518 A
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795672 1 -  60362399 C
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181729 1 -    185531 C
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031116 1 -   9314153 C
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955380 1 -  59632846 C
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496681 1 +  63665305 C
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18829171 1 +  46296322 T
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18059891 1 -  44709034 T
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           140932 1 -    496798 t
i Carlito_syrichta.NW_007259797.1                        I 1 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133538 1 +    179628 T
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89111 1 +    217609 T
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18347357 1 -  23392119 T
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18359617 1 -  23407841 T
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98492 1 +    143979 T
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         4848 1 -      8605 T
i Cephalopachus_bancanus.k141_2037105                    I 1 C 0
s Ceratotherium_simum.JH767749.1                          12227768 1 +  27778364 T
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2486 1 -      3715 T
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470180 1 +   4669795 C
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8729 1 -     19203 C
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3148 1 +      8260 C
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3378 1 +     27781 C
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3524 1 -     20310 C
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6508 1 +     29689 C
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             861 1 +      9989 C
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9196 1 -     27936 C
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9215 1 -     11289 C
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811591 1 +  39242232 C
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217282 1 -  21565898 C
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34402 1 -     53127 C
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1694 1 +      7159 C
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9207 1 -     27947 C
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9183 1 +     17596 C
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39677 1 -     41420 C
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4708 1 -      6351 T
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16619 1 -     52598 T
i Cheirogaleus_major.k141_333249                         I 1 C 0
s Cheirogaleus_medius.k141_1055463                           11968 1 +     57038 T
i Cheirogaleus_medius.k141_1055463                       I 1 C 0
s Chinchilla_lanigera.JH722012.1                           1248389 1 +   2543920 T
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18423146 1 -  18827391 C
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9589 1 -     50209 C
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416594 1 + 135778131 C
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15039 1 +     19366 T
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170138 1 +    839153 T
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_172426               9136 1 -     10935 T
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          C 0 C 0
s Colobus_angolensis.KN981557.1                            1905114 1 +   2368649 C
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944732 1 + 200372422 C
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31626 1 +     84244 C
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545878 1 -  53390261 C
i Condylura_cristata.JH655891.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_287352               303 1 +      4208 A
i Crocidura_indochinensis.CroInd_scaffold_287352         I 50 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24139 1 -     87169 G
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 6261 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2741 1 +      5455 T
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1124 1 +      3576 T
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            60952 1 +   2246927 C
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532786 1 -  12879189 T
i Daubentonia_madagascariensis.ctg71                     I 1 C 0
s Delphinapterus_leucas.KZ290073.1                        16811074 1 +  35494412 A
i Delphinapterus_leucas.KZ290073.1                       I 1 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669301 1 +   1390856 T
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2376 1 +    198055 T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34182 1 +     67921 T
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18895699 1 +  37912305 T
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  11909 1 +     14536 T
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31382 1 -     42551 T
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310175 1 +    607251 t
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1088893 1 +  10337057 T
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16325670 1 -  41312741 T
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279643 1 +   4378816 T
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527464 1 -  39960074 T
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29479 1 +    498745 T
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21199825 1 -  21539334 C
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10750 1 +    133382 G
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24687 1 -     44125 A
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.AANG03299807.1                                   315 1 -       507 g
i Felis_catus.AANG03299807.1                             n 0 C 0
s Felis_catus_fca126.CM031415.1                           20191893 1 + 205367284 g
i Felis_catus_fca126.CM031415.1                          I 6598 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  5418 1 -     36744 G
i Felis_nigripes.FelNig_flattened_line_20823             N 0 C 0
s Fukomys_damarensis.KN121974.1                             848393 1 +   3816255 T
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galagoides_demidoff.k141_31856                              3093 1 -      3432 t
i Galagoides_demidoff.k141_31856                         I 23 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25356 1 +     26054 T
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30246 1 +     49224 T
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                               9983 1 -     32273 T
i Gorilla_beringei.k141_3596273                          I 11 C 0
s Gorilla_gorilla.LT578341.1                             186332136 1 + 186649187 T
i Gorilla_gorilla.LT578341.1                             I 11 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   29975 1 +     78134 T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238055 1 +    327341 G
i Helogale_parvula.HelPar_flattened_line_2585            I 7006 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17375 1 +     36099 T
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20659270 1 +  22651954 C
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 126 1 +       961 T
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111930 1 +    128679 T
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hoolock_leuconedys.ctg274                                    429153 1 +    630532 C
i Hoolock_leuconedys.ctg274                                 I 16 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40520 1 +     55795 G
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 7365 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19739 1 -    143317 T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_307679                               12071 1 -     15490 C
i Hylobates_agilis.k141_307679                           I 16 C 0
s Hylobates_klossii.k141_282416                              54076 1 +     67168 C
i Hylobates_klossii.k141_282416                          I 16 C 0
s Hylobates_pileatus_b.LG02                                     189537523 1 - 191637585 C
i Hylobates_pileatus_b.LG02                                     I 16 C 0
s Hylobates_pileatus_a.tarseq_633                            3330621 1 -  11177569 C
i Hylobates_pileatus_a.tarseq_633                          I 16 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80813 1 +    135385 T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514481 1 -   7955117 C
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   18057 1 +     31101 C
i Indri_indri.k141_3655594                               I 1 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22291 1 +     23964 A
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1558 1 -      3359 A
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6691 1 -     23766 T
i Lepilemur_ankaranensis.k141_596936                     I 1 C 0
s Lepilemur_dorsalis.k141_577674                             24638 1 +     45836 T
i Lepilemur_dorsalis.k141_577674                         I 1 C 0
s Lepilemur_ruficaudatus.k141_420445                         31549 1 -     32627 T
i Lepilemur_ruficaudatus.k141_420445                     I 1 C 0
s Lepilemur_septentrionalis.k141_185316                      22696 1 +     54090 T
i Lepilemur_septentrionalis.k141_185316                  I 1 C 0
s Leptonychotes_weddellii.KB714746.1                       3036003 1 +   3914936 T
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     3474 1 -     14121 T
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 42
s Lipotes_vexillifer.KE559953.1                             267372 1 -    662738 A
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1431349 1 +   1826925 C
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             609 1 +     11245 T
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999444 1 +   6120653 T
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214397 1 -  43346337 T
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951620 1 -  59628241 C
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               1535 1 +     40492 C
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670795 1 +  60120075 C
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7293 1 -     26193 C
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75083 1 -    114318 C
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   806 1 -     23192 C
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10255 1 -     29190 C
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18826 1 +     37952 C
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833914 1 + 187317192 c
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452472 1 -  25927173 C
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74675 1 +     89720 C
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1672 1 +     20474 C
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1473 1 -     14993 C
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324342 1 -    668171 C
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15615 1 -     15935 C
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20412 1 -     45290 C
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23931965 1 -  24302211 C
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346145 1 +    752769 C
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15508 1 +    737560 T
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              46897 1 -    317179 T
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097331 1 -  40650429 C
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6135 1 +     13704 T
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    2959 1 +     10310 A
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18283217 1 -  93316391 T
i Microcebus_murinus.CM007674.1                          I 1 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    15374 1 -    145209 A
i Microgale_talazaci.MicTal_scaffold_6613                I 9 C 0
s Miopithecus_ogouensis.k141_534055                           3702 1 -     28506 C
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62333 1 -     63350 T
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      4572 1 -     37649 T
i Mirza_zaza.k141_952172                                 I 1 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26464 1 -    437263 A
i Monodon_monoceros.MonMon_M_scaffold_103                I 1 C 0
s Moschus_moschiferus.MosMos_scaffold_61429                  27315 1 -     27816 T
i Moschus_moschiferus.MosMos_scaffold_61429              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31256 1 +     37127 G
i Mungos_mungo.MunMun_flattened_line_23663               I 7016 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2239 1 +     14296 T
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               297565 1 -  14710649 T
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              185990 1 +    196477 T
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025409 1 -   3037898 A
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                                9715 1 +     21681 C
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865420 1 +   7148211 A
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145881 1 -   9404916 C
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102574413 1 - 196305487 T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2099 1 +      8486 T
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744840 1 + 199412804 T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                              500622 1 -   2017862 T
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         144548 1 +    630418 t
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  2781335 1 -  10937097 A
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6722 1 -     18566 T
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67144316 1 + 174332312 T
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 44
s Otocyon_megalotis.JAEUCK010005147.1                       458635 1 -    559221 C
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17584906 1 +  44047080 T
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173327 1 -    191736 T
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    36098 1 +     80009 C
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189137050 1 + 189151597 c
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  147040 1 +    230217 G
i Panthera_onca.PanOnc_flattened_line_3271               I 6535 C 0
s Panthera_pardus.KV860321.1                                259749 1 +  18783137 g
i Panthera_pardus.KV860321.1                             I 7715 C 0
s Panthera_tigris.KE722367.1                               4716896 1 -   8748460 g
i Panthera_tigris.KE722367.1                             I 6417 C 0
s Pantholops_hodgsonii.KE114653.1                          1264260 1 -   2937107 T
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183437289 1 + 183742232 C
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1351 1 +     20448 C
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20557973 1 +  20919399 C
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                     94 1 +     41871 C
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     3383 1 +     27711 C
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  3372 1 +      9205 C
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8776 1 -     78924 g
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 7468 C 0
s Perodicticus_ibeanus.k141_855320                            4591 1 +     13100 T
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             2959 1 +     25941 T
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25256 1 +     32600 C
i Perognathus_longimembris.PerPac_flattened_line_34437   I 1 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25740 1 -     29689 T
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8382 1 +     63832 A
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38231 1 +     62158 C
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        32958 1 +     89929 C
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34374 1 +     51399 C
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290595 1 -  14605196 C
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34088 1 +     35617 A
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189125136 1 + 189387572 c
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9564979 1 +   9816681 C
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               67875 1 -     81375 C
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9702 1 +     10147 C
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9887 1 -     22811 T
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986271 1 +   2598838 T
i Propithecus_coquerelli.NW_012148875.1                  I 1 C 0
s Propithecus_coronatus.k141_347390                          24560 1 +     38485 T
i Propithecus_coronatus.k141_347390                      I 1 C 0
s Propithecus_diadema.k141_357118                              721 1 +      4256 T
i Propithecus_diadema.k141_357118                        I 1 C 0
s Propithecus_edwardsi.k141_1176054                          22079 1 +     35766 T
i Propithecus_edwardsi.k141_1176054                      I 1 C 0
s Propithecus_perrieri.k141_1200571                            262 1 -     24134 T
i Propithecus_perrieri.k141_1200571                      I 1 C 0
s Propithecus_tattersalli.k141_790011                        24074 1 -     67325 T
i Propithecus_tattersalli.k141_790011                    I 1 C 0
s Propithecus_verreauxi.k141_956661                            319 1 -      6182 T
i Propithecus_verreauxi.k141_956661                      I 1 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36576 1 +     42204 T
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 1 C 0
s Puma_concolor.QAVW01001104.1                            20270207 1 -  38429054 g
i Puma_concolor.QAVW01001104.1                           I 7193 C 0
s Pygathrix_cinerea.k141_1153803                              9704 1 -     91421 C
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603838 1 +   7812017 C
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9677 1 -     72585 C
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4796 1 +     55207 T
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinopithecus_bieti.k119_217274                             1090 1 -     11128 C
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230467 1 - 195417433 C
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7666175 1 +   7961872 C
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3449 1 +      4321 T
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151301 1 -    313613 C
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          14219 1 -     19888 C
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21424 1 +     39453 C
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            1948 1 +     27826 C
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1470 1 -     19483 C
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1532 1 +      7198 C
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9792 1 +     15514 C
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187587 1 -    191337 A
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13646941 1 -  18376816 A
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1948122 1 -   3870691 C
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27119 1 +     97271 T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14125 1 -    196729 G
i Suricata_suricatta.SurSur_flattened_line_6629          I 7049 C 0
s Sus_scrofa.CM000828.4                                   62882374 1 -  69701581 C
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1087768 1 -   1523678 C
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69352 1 +    116680 T
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115098 1 -    156842 T
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383553 1 +    539355 T
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10547 1 +     70052 T
i Tarsius_lariang.k141_2201908                           I 1 C 0
s Tarsius_wallacei.k141_780063                               14852 1 +     25099 T
i Tarsius_wallacei.k141_780063                           I 1 C 0
s Theropithecus_gelada.CM009954.1                        186422798 1 + 186847797 C
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103080 1 +    114563 T
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   1766 1 +      8208 T
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Trachypithecus_auratus.k141_722599                          5529 1 -     20410 C
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9721 1 +     15221 C
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5629 1 +     19930 C
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2056 1 -     19997 C
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42175 1 -     60166 C
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9647 1 -     27529 C
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9587 1 -     18194 C
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3323 1 -     21137 C
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2025 1 -     10723 C
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1178 1 +      9834 C
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19496 1 +     32220 C
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933593 1 +   6242583 C
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2838 1 +     20839 C
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    375 1 -      1748 T
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737582 1 +  33153633 A
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   51425 1 -     77625 C
i Uropsilus_gracilis.UroGra_scaffold_12083               I 56 I 56
s Ursus_maritimus.KK499267.1                               4846819 1 -   5085361 C
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368286 1 -   5488506 A
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7296 1 -     43706 C
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19617 1 -     24430 T
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1744 1 +      2932 T
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11274 1 +     12536 A
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Zapus_hudsonius.ZapHud_scaffold_11398                       9894 0 +     63895 C
e Varecia_variegata.k141_1128296                              7155 0 +     24756 C
e Varecia_rubra.k141_590885                                   7107 0 +     50397 C
e Tupaia_tana.TupTan_flattened_line_97126                     3104 0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2149485 0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tonatia_saurophila.TonSau_scaffold_294                     78865 0 +    610378 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                 6724 0 +     41958 C
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                84570 0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        366818 0 -   3329780 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Pteropus_vampyrus.KN534172.1                                1522 0 -      8028 C
e Pteropus_alecto.KB030862.1                              22973585 0 +  28871421 C
e Pteronotus_parnellii.KE909381.1                            11108 0 -     21811 C
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414 0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1355312 0 +   3988456 C
e Noctilio_leporinus.NocLep_scaffold_251                    756291 0 +    783361 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myotis_myotis.MyoMyo_scaffold_28916                        32267 0 +     33610 C
e Myotis_lucifugus.GL429869.1                              3901718 0 -   4330536 C
e Myotis_davidii.KB100139.1                                1585501 0 -   6019432 C
e Myotis_brandtii.KE162005.1                                277930 0 -  10118263 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           4820 0 +     14753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 137726 0 -    366855 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             32628 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1848759 0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                13320 0 -     19307 C
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                         6687 7 -    207569 I
e Macroglossus_sobrinus.MacSob_scaffold_8222                 87462 0 +     94391 C
e Lemur_catta.scaffold_24                                 15519761 0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    11810 0 -     42476 C
e Jaculus_jaculus.JH725527.1                               8271260 0 -   9596543 C
e Hipposideros_galeritus.HipGal_scaffold_29171               39713 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       108272 0 +   1711038 C
e Hapalemur_occidentalis.k141_907772                          9234 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402 0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298 0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517 0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                               9432 0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267 0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247 0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321 0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369 0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369 0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184 0 -     25546 C
e Eulemur_collaris.k141_377015                                2154 0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453 0 -     14127 C
e Erinaceus_europaeus.JH835339.1                           3325252 0 -   7059049 C
e Eptesicus_fuscus.JH977646.1                              2143673 0 -  14770903 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Eidolon_helvum.KE759718.1                                   7315 0 +     11740 C
e Desmodus_rotundus.KZ672289.1                             8627809 0 +  20541912 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          10396 0 -     20389 C
e Carollia_perspicillata.CarPer_scaffold_92756                2778 0 -     11696 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  2360 0 +     43469 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183008 0 +    412891 C
e Allactaga_bullata.AllBul_scaffold_9566                     64891 0 -     89534 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                        737 2 +     62944 AC
s Acinonyx_jubatus.LLWD01001279.1                           823194 2 -   1699592 AT
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506886 2 -  29979442 AT
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             75109 2 -    347723 AT
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9212 2 -     52922 AC
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9137 2 -     28001 AC
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9263 2 -      9772 AC
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            420 2 -     12518 AC
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675054 2 -   2318259 AT
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97506 2 -    100397 AT
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7165 2 +     20879 AT
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14359 2 +     17124 AT
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Avahi_laniger.k141_765380                                  49201 2 -     92717 GC
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              49826 2 +     85213 GC
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191439 2 +  23207421 AT
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         1905 2 -     18090 AT
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    25976 2 +     34529 AT
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    199014 2 -    288883 AT
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20272219 2 +  48749331 AT
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1124779 2 -   1948126 AT
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18082857 2 +  45695690 AT
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2818347 2 +   4408762 AT
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998798 2 -  17673402 AT
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331262 2 -   7040546 AT
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399538 2 -   1652518 AT
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795673 2 -  60362399 AT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181730 2 -    185531 AT
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031117 2 -   9314153 AT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955381 2 -  59632846 AT
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496682 2 +  63665305 AT
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18829172 2 +  46296322 AT
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18059892 2 -  44709034 AT
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           140933 2 -    496798 ac
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133539 2 +    179628 AC
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89112 2 +    217609 AT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18347358 2 -  23392119 GT
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18359618 2 -  23407841 GT
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98493 2 +    143979 GT
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         4849 2 -      8605 AC
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227769 2 +  27778364 AT
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2487 2 -      3715 AT
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470181 2 +   4669795 AC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8730 2 -     19203 AC
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3149 2 +      8260 AC
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3379 2 +     27781 AC
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3525 2 -     20310 AC
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6509 2 +     29689 AC
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             862 2 +      9989 AC
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9197 2 -     27936 AC
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9216 2 -     11289 AC
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811592 2 +  39242232 AC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217283 2 -  21565898 AC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34403 2 -     53127 AC
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1695 2 +      7159 AC
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9208 2 -     27947 AC
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9184 2 +     17596 AC
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39678 2 -     41420 AC
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4709 2 -      6351 GT
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16620 2 -     52598 GC
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           11969 2 +     57038 GC
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1248390 2 +   2543920 GT
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18423147 2 -  18827391 AC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9590 2 -     50209 AC
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416595 2 + 135778131 AC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15040 2 +     19366 AT
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170139 2 +    839153 AT
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_172426               9137 2 -     10935 GT
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          C 0 C 0
s Colobus_angolensis.KN981557.1                            1905115 2 +   2368649 AC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944733 2 + 200372422 AC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31627 2 +     84244 AC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545879 2 -  53390261 AC
i Condylura_cristata.JH655891.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_287352               304 2 +      4208 AA
i Crocidura_indochinensis.CroInd_scaffold_287352         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24140 2 -     87169 AT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2742 2 +      5455 GC
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1125 2 +      3576 GT
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            60953 2 +   2246927 AT
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532787 2 -  12879189 AC
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811075 2 +  35494412 AT
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669302 2 +   1390856 AT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2377 2 +    198055 AT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34183 2 +     67921 GC
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18895700 2 +  37912305 AA
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  11910 2 +     14536 AA
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31383 2 -     42551 GT
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310176 2 +    607251 aT
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1088894 2 +  10337057 AT
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16325671 2 -  41312741 AT
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279644 2 +   4378816 AC
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527465 2 -  39960074 AC
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29480 2 +    498745 AC
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3325252 2 -   7059049 AT
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21199826 2 -  21539334 AC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10751 2 +    133382 AC
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24688 2 -     44125 AT
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.AANG03299807.1                                   316 2 -       507 AT
i Felis_catus.AANG03299807.1                             C 0 C 0
s Felis_catus_fca126.CM031415.1                           20191894 2 + 205367284 AT
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  5419 2 -     36744 AT
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             848394 2 +   3816255 GA
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galagoides_demidoff.k141_31856                              3094 2 -      3432 ga
i Galagoides_demidoff.k141_31856                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25357 2 +     26054 GT
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30247 2 +     49224 GA
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                               9984 2 -     32273 AA
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186332137 2 + 186649187 AA
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   29976 2 +     78134 GA
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238056 2 +    327341 AT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17376 2 +     36099 AC
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20659271 2 +  22651954 AT
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 127 2 +       961 GT
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111931 2 +    128679 AT
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hoolock_leuconedys.ctg274                                    429154 2 +    630532 AC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40521 2 +     55795 AT
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19740 2 -    143317 GC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_307679                               12072 2 -     15490 AC
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              54077 2 +     67168 AC
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189537524 2 - 191637585 AC
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3330622 2 -  11177569 AC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80814 2 +    135385 GT
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514482 1 -   7955117 -T
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   18058 2 +     31101 GC
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22292 2 +     23964 AT
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1559 2 -      3359 AC
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6692 2 -     23766 GC
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24639 2 +     45836 GC
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31550 2 -     32627 GC
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      22697 2 +     54090 GC
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3036004 2 +   3914936 AT
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     3517 2 -     14121 CA
i Lepus_americanus.LepAme_scaffold_107385                I 42 I 181
s Lipotes_vexillifer.KE559953.1                             267373 2 -    662738 AT
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1431350 2 +   1826925 AT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             610 2 +     11245 AT
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999445 2 +   6120653 AT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214398 2 -  43346337 GT
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951621 2 -  59628241 AT
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               1536 2 +     40492 AC
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670796 2 +  60120075 AC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7294 2 -     26193 AC
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75084 2 -    114318 AC
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   807 2 -     23192 AC
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10256 2 -     29190 AC
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18827 2 +     37952 AC
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833915 2 + 187317192 ac
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452473 2 -  25927173 AC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74676 2 +     89720 AC
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1673 2 +     20474 AC
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1474 2 -     14993 AC
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324343 2 -    668171 AC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15616 2 -     15935 AC
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20413 2 -     45290 AC
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23931966 2 -  24302211 AC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346146 2 +    752769 AC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15509 2 +    737560 GA
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              46898 2 -    317179 AA
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097332 1 -  40650429 -T
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6136 2 +     13704 AT
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    2960 2 +     10310 AT
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18283218 2 -  93316391 GC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    15375 2 -    145209 GT
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3703 2 -     28506 AC
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62334 2 -     63350 AT
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      4573 2 -     37649 GC
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26465 2 -    437263 AT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_61429                  27316 2 -     27816 AT
i Moschus_moschiferus.MosMos_scaffold_61429              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31257 2 +     37127 AT
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2240 2 +     14296 GA
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               297566 2 -  14710649 AT
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              185991 2 +    196477 AC
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025410 2 -   3037898 GA
i Nannospalax_galili.KL204047.1                          C 0 I 1
s Nasalis_larvatus.k141_413338                                9716 2 +     21681 AC
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865421 2 +   7148211 AT
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145882 2 -   9404916 AT
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102574414 2 - 196305487 AT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2100 2 +      8486 AT
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744841 2 + 199412804 AT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355312 2 +   3988456 CA
i Ochotona_princeps.JH802162.1                           C 0 I 180
s Odobenus_rosmarus.KB229312.1                              500623 2 -   2017862 AT
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         144549 2 +    630418 aT
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  2781336 2 -  10937097 AT
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6723 2 -     18566 GT
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67144361 2 + 174332312 ca
i Oryctolagus_cuniculus.CM000791.1                       I 44 I 181
s Otocyon_megalotis.JAEUCK010005147.1                       458636 2 -    559221 AT
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17584907 2 +  44047080 AC
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173328 2 -    191736 AC
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    36099 2 +     80009 AC
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189137051 2 + 189151597 ac
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  147041 2 +    230217 AT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                259750 2 +  18783137 AT
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4716897 2 -   8748460 AT
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1264261 2 -   2937107 AT
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183437290 2 + 183742232 AC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1352 2 +     20448 AC
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20557974 2 +  20919399 AC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                     95 2 +     41871 AC
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     3384 2 +     27711 AC
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  3373 2 +      9205 AC
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8777 2 -     78924 at
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            4592 2 +     13100 AT
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             2960 2 +     25941 AT
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25257 2 +     32600 AA
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25741 2 -     29689 AT
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8383 2 +     63832 AT
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38232 2 +     62158 AC
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        32959 2 +     89929 AC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34375 2 +     51399 AC
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290596 2 -  14605196 AC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34089 2 +     35617 AT
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189125137 2 + 189387572 ac
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9564980 2 +   9816681 AC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               67876 2 -     81375 AC
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9703 2 +     10147 AC
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9888 2 -     22811 GT
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986272 2 +   2598838 GC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          24561 2 +     38485 GC
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                              722 2 +      4256 GC
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22080 2 +     35766 GC
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            263 2 -     24134 GC
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24075 2 -     67325 GC
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            320 2 -      6182 GC
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36577 2 +     42204 AT
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Puma_concolor.QAVW01001104.1                            20270208 2 -  38429054 AT
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                              9705 2 -     91421 AC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603839 2 +   7812017 AC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9678 2 -     72585 AC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4797 2 +     55207 AT
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinopithecus_bieti.k119_217274                             1091 2 -     11128 AC
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230468 2 - 195417433 AC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7666176 2 +   7961872 AC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3450 2 +      4321 AC
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151302 2 -    313613 AC
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          14220 2 -     19888 AC
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21425 2 +     39453 AC
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            1949 2 +     27826 AC
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1471 2 -     19483 AC
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1533 2 +      7198 AC
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9793 2 +     15514 AC
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187588 2 -    191337 AT
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13646942 2 -  18376816 AA
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1948123 2 -   3870691 GT
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27120 2 +     97271 AT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14126 2 -    196729 AT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   62882375 2 -  69701581 AT
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1087769 2 -   1523678 AC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69353 2 +    116680 AT
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115099 2 -    156842 AT
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383554 2 +    539355 AT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10548 2 +     70052 AC
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               14853 2 +     25099 AC
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422799 2 + 186847797 AC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103081 2 +    114563 AT
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   1767 2 +      8208 GT
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Trachypithecus_auratus.k141_722599                          5530 2 -     20410 AC
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9722 2 +     15221 AC
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5630 2 +     19930 AC
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2057 2 -     19997 AC
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42176 2 -     60166 AC
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9648 2 -     27529 AC
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9588 2 -     18194 AC
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3324 2 -     21137 AC
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2026 2 -     10723 AC
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1179 2 +      9834 AC
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19497 2 +     32220 AC
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933594 2 +   6242583 AC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2839 2 +     20839 AC
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    376 2 -      1748 AT
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 C 0
s Tupaia_chinensis.KB320699.1                              2149485 2 +   4065304 AT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     3104 2 -     10553 GT
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737583 2 +  33153633 AT
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_97021                    1802 2 -      4736 AC
i Uropsilus_gracilis.UroGra_scaffold_97021               I 1 C 0
s Ursus_maritimus.KK499267.1                               4846820 2 -   5085361 AT
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368287 2 -   5488506 AT
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7297 2 -     43706 AT
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19618 2 -     24430 TT
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1745 2 +      2932 AT
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11275 2 +     12536 AT
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Zapus_hudsonius.ZapHud_scaffold_11398                       9894 0 +     63895 C
e Varecia_variegata.k141_1128296                              7155 0 +     24756 C
e Varecia_rubra.k141_590885                                   7107 0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tonatia_saurophila.TonSau_scaffold_294                     78865 0 +    610378 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                 6724 0 +     41958 C
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                84570 0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        366818 0 -   3329780 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Pteropus_vampyrus.KN534172.1                                1522 0 -      8028 C
e Pteropus_alecto.KB030862.1                              22973585 0 +  28871421 C
e Pteronotus_parnellii.KE909381.1                            11108 0 -     21811 C
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414 0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    756291 0 +    783361 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myotis_myotis.MyoMyo_scaffold_28916                        32267 0 +     33610 C
e Myotis_lucifugus.GL429869.1                              3901718 0 -   4330536 C
e Myotis_davidii.KB100139.1                                1585501 0 -   6019432 C
e Myotis_brandtii.KE162005.1                                277930 0 -  10118263 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           4820 0 +     14753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 137726 0 -    366855 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             32628 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1848759 0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                13320 0 -     19307 C
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                         6687 7 -    207569 I
e Macroglossus_sobrinus.MacSob_scaffold_8222                 87462 0 +     94391 C
e Lemur_catta.scaffold_24                                 15519761 0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    11810 0 -     42476 C
e Jaculus_jaculus.JH725527.1                               8271260 0 -   9596543 C
e Hipposideros_galeritus.HipGal_scaffold_29171               39713 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       108272 0 +   1711038 C
e Hapalemur_occidentalis.k141_907772                          9234 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402 0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298 0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517 0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                               9432 0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267 0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247 0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321 0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369 0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369 0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184 0 -     25546 C
e Eulemur_collaris.k141_377015                                2154 0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453 0 -     14127 C
e Eptesicus_fuscus.JH977646.1                              2143673 0 -  14770903 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Eidolon_helvum.KE759718.1                                   7315 0 +     11740 C
e Desmodus_rotundus.KZ672289.1                             8627809 0 +  20541912 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          10396 0 -     20389 C
e Carollia_perspicillata.CarPer_scaffold_92756                2778 0 -     11696 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  2360 0 +     43469 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183008 0 +    412891 C
e Allactaga_bullata.AllBul_scaffold_9566                     64891 0 -     89534 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                        739 5 +     62944 AGA-TG
s Acinonyx_jubatus.LLWD01001279.1                           823196 5 -   1699592 AGG-CA
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506888 5 -  29979442 AGG-TG
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             75111 5 -    347723 AGG-CA
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64891 5 -     89534 AGA-CA
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9214 5 -     52922 AGA-CA
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9139 5 -     28001 AGA-CA
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9265 5 -      9772 AGA-CA
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            422 5 -     12518 AGA-CA
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675056 5 -   2318259 GGA-CA
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183008 1 +    412891 -----A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97508 5 -    100397 GGA-CA
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7167 4 +     20879 AGA-C-
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14361 5 +     17124 AGA-CA
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2360 1 +     43469 -----A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  49203 5 -     92717 AGA-CA
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              49828 5 +     85213 AGA-CA
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191441 5 +  23207421 GGA-CA
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         1907 5 -     18090 GGA-CA
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    25978 5 +     34529 GGA-CA
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    199016 5 -    288883 GGA-CA
i Bison_bison.KN261452.1                                 C 0 I 1
s Bos_indicus.CM003047.1                                  20272221 5 +  48749331 GGA-CA
i Bos_indicus.CM003047.1                                 C 0 I 1
s Bos_mutus.JH880303.1                                     1124781 5 -   1948126 GGA-CA
i Bos_mutus.JH880303.1                                   C 0 I 1
s Bos_taurus.CM000203.6                                   18082859 5 +  45695690 GGA-CA
i Bos_taurus.CM000203.6                                  C 0 I 1
s Bubalus_bubalis.KI419123.1                               2818349 5 +   4408762 GGA-CA
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998800 5 -  17673402 GGA-CA
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331264 5 -   7040546 GGA-CA
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399540 5 -   1652518 GGA-CA
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795675 5 -  60362399 AGA-CG
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181732 5 -    185531 AGA-CG
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031119 5 -   9314153 AGA-CG
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955383 5 -  59632846 AGA-CG
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496684 5 +  63665305 AGA-CG
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18829174 5 +  46296322 GGA-CA
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18059894 5 -  44709034 GGA-CA
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           140935 5 -    496798 aga-aa
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2778 1 -     11696 -----A
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133541 5 +    179628 TGA-TA
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89114 5 +    217609 GGA-CA
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18347360 5 -  23392119 GGA-CA
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18359620 5 -  23407841 GGA-CA
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98495 5 +    143979 GGA-CA
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         4851 5 -      8605 AGA-AA
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227771 5 +  27778364 AGA-CA
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2489 5 -      3715 AGA-CA
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470183 5 +   4669795 AGA-CA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8732 5 -     19203 AGA-CA
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3151 5 +      8260 AGA-CA
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3381 5 +     27781 AGA-CA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3527 5 -     20310 AGA-CA
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6511 5 +     29689 AGA-CA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             864 5 +      9989 AGA-CA
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9199 5 -     27936 AGA-CA
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9218 5 -     11289 AGA-CA
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811594 5 +  39242232 AGA-CA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217285 5 -  21565898 AGA-CA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34405 5 -     53127 AGA-CA
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1697 5 +      7159 AGA-CA
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9210 5 -     27947 AGA-CA
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9186 5 +     17596 AGA-CA
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39680 5 -     41420 AGA-CA
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4711 5 -      6351 AGA-CA
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16622 5 -     52598 AGA-CA
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           11971 5 +     57038 AGA-CA
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1248392 5 +   2543920 ATA-CA
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18423149 5 -  18827391 AGA-CA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9592 5 -     50209 AGA-CA
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416597 5 + 135778131 AGA-CA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15042 5 +     19366 AGA-CA
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170141 5 +    839153 AGA-CA
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_172426               9139 5 -     10935 AGA-CA
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          C 0 C 0
s Colobus_angolensis.KN981557.1                            1905117 5 +   2368649 AGA-CA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944735 5 + 200372422 AGA-CA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31629 5 +     84244 AGA-CA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545881 5 -  53390261 AGC-CC
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10396 1 -     20389 -----A
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_287352               306 5 +      4208 AGA-CA
i Crocidura_indochinensis.CroInd_scaffold_287352         C 0 I 2
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24142 5 -     87169 AGG-CA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2744 5 +      5455 AGA-CA
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1127 5 +      3576 AGA-CA
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            60955 5 +   2246927 AGA-CA
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532789 5 -  12879189 AGA-CA
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811077 5 +  35494412 GGA-CA
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8627809 1 +  20541912 -----A
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669304 5 +   1390856 AAA-CA
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2379 5 +    198055 AGG-CA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34185 5 +     67921 ATG-CA
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18895702 3 +  37912305 --A-CA
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  11912 3 +     14536 --A-CA
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31385 5 -     42551 GGA-CA
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE759718.1                                   7315 1 +     11740 -----A
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310178 5 +    607251 GGA-CA
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1088896 5 +  10337057 CTA-CA
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16325673 5 -  41312741 AGA-AG
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2143673 1 -  14770903 -----A
i Eptesicus_fuscus.JH977646.1                            C 0 I 293
s Equus_asinus.JREZ01000139.1                              1279646 5 +   4378816 AGA-CA
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527467 5 -  39960074 AGA-CA
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29482 5 +    498745 AGA-CA
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3325254 3 -   7059049 AGA---
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21199828 5 -  21539334 AGA-CA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10753 5 +    133382 GGA-CA
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24690 5 -     44125 GGA-CA
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.AANG03299807.1                                   318 5 -       507 AGG-CA
i Felis_catus.AANG03299807.1                             C 0 C 0
s Felis_catus_fca126.CM031415.1                           20191896 5 + 205367284 AGG-CA
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  5421 5 -     36744 AGG-CA
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             848396 5 +   3816255 ACA-CA
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galagoides_demidoff.k141_31856                              3096 5 -      3432 aga-ca
i Galagoides_demidoff.k141_31856                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25359 5 +     26054 AGA-CA
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30249 5 +     49224 GGA-CA
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                               9986 6 -     32273 GAACTG
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186332139 6 + 186649187 GAACTg
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   29978 5 +     78134 GGA-CA
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238058 5 +    327341 AGG-CA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17378 5 +     36099 GGA-CA
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20659273 5 +  22651954 ACA-CA
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 129 5 +       961 AGA-CA
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111933 5 +    128679 GGG-CA
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108272 1 +   1711038 -----A
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39713 1 +     43066 -----A
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    429156 5 +    630532 AGA-CG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40523 5 +     55795 AGT-CA
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19742 5 -    143317 GGA-CA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_307679                               12074 5 -     15490 AGA-CG
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              54079 5 +     67168 AGA-CG
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189537526 5 - 191637585 AGA-CG
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3330624 5 -  11177569 AGA-CG
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80816 5 +    135385 AAA-CA
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514483 5 -   7955117 GGA-CA
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   18060 5 +     31101 AGA-CA
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22294 5 +     23964 GGA-CA
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271260 5 -   9596543 AGA-CA
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1561 5 -      3359 GGA-CA
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    11810 1 -     42476 -----A
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 330
s Lepilemur_ankaranensis.k141_596936                          6694 5 -     23766 AGA-CA
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24641 5 +     45836 AGA-CA
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31552 5 -     32627 AGA-CA
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      22699 5 +     54090 AGA-CA
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3036006 5 +   3914936 AGG-CG
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     3700 5 -     14121 gga-ca
i Lepus_americanus.LepAme_scaffold_107385                I 181 C 0
s Lipotes_vexillifer.KE559953.1                             267375 5 -    662738 GGA-CA
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1431352 5 +   1826925 AGA-CA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             612 5 +     11245 AGA-CA
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999447 5 +   6120653 AGA-CA
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214400 5 -  43346337 AGA-CA
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951623 5 -  59628241 AGA-CG
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               1538 5 +     40492 AGA-CA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670798 5 +  60120075 AGA-CA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7296 5 -     26193 AGA-CA
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75086 5 -    114318 AGA-CA
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   809 5 -     23192 AGA-CA
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10258 5 -     29190 AGA-CA
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18829 5 +     37952 AGA-CA
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833917 5 + 187317192 aga-ca
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452475 5 -  25927173 AGA-CA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74678 5 +     89720 AGA-CA
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1675 5 +     20474 AGA-CA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1476 5 -     14993 AGA-CA
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324345 5 -    668171 AGA-CA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15618 5 -     15935 AGA-CG
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20415 5 -     45290 AGA-CA
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87462 1 +     94391 -----A
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23931968 5 -  24302211 AGA-CA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346148 5 +    752769 AGA-CA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15511 5 +    737560 AGA-CA
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              46900 5 -    317179 AGA-CA
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097333 5 -  40650429 GGA-CA
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6694 1 -    207569 -----G
i Megaderma_lyra.MegLyr_scaffold_4542                    I 7 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6138 5 +     13704 AGA-AG
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    2962 5 +     10310 GGA-CA
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18283220 5 -  93316391 AGA-CA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    15377 5 -    145209 AGA-AT
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13320 1 -     19307 -----A
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1848759 1 +   8254450 -----A
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 235
s Miniopterus_schreibersii.MinSch_scaffold_18080             32628 1 +     64694 -----A
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 242
s Miopithecus_ogouensis.k141_534055                           3705 5 -     28506 AGA-CA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62336 5 -     63350 AGG-CG
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      4575 5 -     37649 AGA-CA
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26467 5 -    437263 GGA-CA
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137726 1 -    366855 -----A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_61429                  27318 5 -     27816 GGA-CA
i Moschus_moschiferus.MosMos_scaffold_61429              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31259 5 +     37127 AGG-CA
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           4820 1 +     14753 -----A
i Murina_feae.MurFea_scaffold_85699                      C 0 I 209
s Muscardinus_avellanarius.MusAve_scaffold_82313              2242 5 +     14296 GGA-TA
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               297568 5 -  14710649 AGA-AG
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                277930 1 -  10118263 -----A
i Myotis_brandtii.KE162005.1                             C 0 I 271
s Myotis_davidii.KB100139.1                                1585501 1 -   6019432 -----A
i Myotis_davidii.KB100139.1                              C 0 I 257
s Myotis_lucifugus.GL429869.1                              3901718 1 -   4330536 -----A
i Myotis_lucifugus.GL429869.1                            C 0 I 249
s Myotis_myotis.MyoMyo_scaffold_28916                        32267 1 +     33610 -----A
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 I 259
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              185993 5 +    196477 AGA-CA
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025413 5 -   3037898 AGA-CA
i Nannospalax_galili.KL204047.1                          I 1 C 0
s Nasalis_larvatus.k141_413338                                9718 5 +     21681 AGA-CA
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865423 5 +   7148211 GGA-CA
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756291 1 +    783361 -----A
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145884 5 -   9404916 AGA-CG
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102574416 5 - 196305487 AGA-CA
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2102 5 +      8486 AGA-CA
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744843 5 + 199412804 AGA-CA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355494 5 +   3988456 aca-ca
i Ochotona_princeps.JH802162.1                           I 180 C 0
s Odobenus_rosmarus.KB229312.1                              500625 5 -   2017862 AGG-CA
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         144551 5 +    630418 GGA-CA
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  2781338 5 -  10937097 GGA-CA
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6725 5 -     18566 AGA-CA
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67144544 5 + 174332312 gga-ca
i Oryctolagus_cuniculus.CM000791.1                       I 181 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458638 5 -    559221 AGA-CG
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17584909 5 +  44047080 GGA-CA
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173330 5 -    191736 GGA-CA
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    36101 5 +     80009 AGA-TG
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189137053 5 + 189151597 aga-tg
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  147043 5 +    230217 GGG-CA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                259752 5 +  18783137 GGG-CA
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4716899 5 -   8748460 GGG-CA
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1264263 5 -   2937107 GGA-CA
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183437292 5 + 183742232 AGA-CA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1354 5 +     20448 GGA-CA
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20557976 5 +  20919399 AGA-CA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                     97 5 +     41871 GGA-CA
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     3386 5 +     27711 AGA-CA
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  3375 5 +      9205 GGA-CA
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8779 5 -     78924 AGG-CA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            4594 5 +     13100 AGA-CA
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             2962 5 +     25941 AGA-CA
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25259 3 +     32600 --A-CA
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25743 5 -     29689 AGA-CA
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8385 5 +     63832 GGA-CA
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38234 5 +     62158 AGA-CA
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        32961 5 +     89929 AGA-CA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34377 5 +     51399 AGA-CA
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290598 5 -  14605196 AGA-CA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34091 5 +     35617 GGA-CA
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189125139 5 + 189387572 aga-cG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9564982 5 +   9816681 AGA-CG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               67878 5 -     81375 AGA-CA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9705 5 +     10147 AGA-CA
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9890 5 -     22811 AGA-CA
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986274 5 +   2598838 AGA-CA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          24563 5 +     38485 AGA-CA
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                              724 5 +      4256 AGA-CA
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22082 5 +     35766 AGA-CA
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            265 5 -     24134 AGA-CA
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24077 5 -     67325 AGA-CA
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            322 5 -      6182 AGA-CA
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11108 1 -     21811 -----G
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36579 5 +     42204 AGA-AG
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973585 1 +  28871421 -----A
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1522 1 -      8028 -----A
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20270210 5 -  38429054 AGG-CA
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                              9707 5 -     91421 AGA-CA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603841 5 +   7812017 AGA-CA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9680 5 -     72585 AGA-CA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4799 5 +     55207 GGA-CA
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        366818 1 -   3329780 -----G
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             1093 5 -     11128 AGA-CA
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230470 5 - 195417433 AGA-CA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7666178 5 +   7961872 AGA-CA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84570 1 -     96226 -----A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3452 5 +      4321 GGA-CA
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151304 5 -    313613 AGT-CC
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          14222 5 -     19888 AGA-CA
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21427 5 +     39453 AGA-CA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            1951 5 +     27826 AGA-CA
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1473 5 -     19483 AGA-CA
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1535 5 +      7198 AGA-CA
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9795 5 +     15514 AGA-CA
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187590 5 -    191337 AGA-TA
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13646944 5 -  18376816 AGG-CA
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1948125 5 -   3870691 GGA-CA
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27122 5 +     97271 AGG-CA
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14128 5 -    196729 AGG-CA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   62882377 5 -  69701581 GGA-CA
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1087771 5 -   1523678 AGA-CG
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6724 1 +     41958 -----A
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69355 5 +    116680 AGA-CA
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115101 5 -    156842 AGA-CA
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383556 5 +    539355 AGA-CA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10550 5 +     70052 AGA-AA
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               14855 5 +     25099 AAA-AA
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422801 5 + 186847797 AGA-CA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103083 5 +    114563 TGA-AA
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   1769 5 +      8208 AGA-CA
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78865 1 +    610378 -----A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          5532 5 -     20410 AGA-CA
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9724 5 +     15221 AGA-CA
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5632 5 +     19930 AGA-CA
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2059 5 -     19997 AGA-CA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42178 5 -     60166 AGA-CA
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9650 5 -     27529 AGA-CA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9590 5 -     18194 AGA-CA
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3326 5 -     21137 AGA-CA
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2028 5 -     10723 AGA-CA
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1181 5 +      9834 AGA-CA
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19499 5 +     32220 AGA-CA
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933596 5 +   6242583 AGA-CA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2841 5 +     20839 AGA-CA
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    378 5 -      1748 GGA-CT
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 C 0
s Tupaia_chinensis.KB320699.1                              2149487 5 +   4065304 AGA-CA
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     3106 5 -     10553 AGA-CA
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737585 5 +  33153633 GGA-CA
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_97021                    1804 5 -      4736 AGA-CC
i Uropsilus_gracilis.UroGra_scaffold_97021               C 0 C 0
s Ursus_maritimus.KK499267.1                               4846822 5 -   5085361 AGG-CA
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368289 5 -   5488506 GGA-CA
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7299 5 -     43706 AGA-CG
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19620 5 -     24430 GGA-CA
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1747 5 +      2932 AGG-CA
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9894 5 +     63895 AGA-CA
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11277 5 +     12536 GGA-CA
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Varecia_variegata.k141_1128296                              7155 0 +     24756 C
e Varecia_rubra.k141_590885                                   7107 0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414 0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lemur_catta.scaffold_24                                 15519761 0 -  30322482 C
e Hapalemur_occidentalis.k141_907772                          9234 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402 0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298 0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517 0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                               9432 0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267 0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247 0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321 0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369 0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369 0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184 0 -     25546 C
e Eulemur_collaris.k141_377015                                2154 0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453 0 -     14127 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                        744 12 +     62944 CAG---------------GGAAG---AG-AG
s Acinonyx_jubatus.LLWD01001279.1                           823201  3 -   1699592 TAG----------------------------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 3
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506893  3 -  29979442 TAG----------------------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 3
s Ailurus_fulgens.LNAC01001112.1                             75116  3 -    347723 TAG----------------------------
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 3
s Allactaga_bullata.AllBul_scaffold_9566                     64896 11 -     89534 TAG---------------AGAAG---TA-A-
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 1
s Allenopithecus_nigroviridis.k141_3361533                    9219 11 -     52922 CAG---------------GGAAG---AG-A-
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9144 12 -     28001 CAG---------------GGAAG---AG-AC
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9270 12 -      9772 CAG---------------GGAAG---AG-AC
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            427 12 -     12518 CAG---------------GGAAG---AG-AC
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675061 12 -   2318259 GGG---------------TAGGA---GCAT-
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183009 13 +    412891 TCA---------------GGAAGGA-GC-T-
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97513 12 -    100397 GGG---------------TAGGA---GCAT-
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7171  8 +     20879 ------------------AGAAG---TA-A-
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 3
s Arctocebus_calabarensis.k141_288239                        14366  9 +     17124 TAG---------------ATGTG---T----
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2361 13 +     43469 TCA---------------GGAAGGA-GC-T-
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  49208 11 -     92717 TAG---------------AGAAG---CA-A-
i Avahi_laniger.k141_765380                              C 0 I 3
s Avahi_peyrierasi.k141_1424874                              49833 11 +     85213 TAG---------------AGAAG---CA-A-
i Avahi_peyrierasi.k141_1424874                          C 0 I 3
s Balaenoptera_acutorostrata.KI537508.1                   15191446 12 +  23207421 GGG---------------TAGGA---ACTT-
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         1912 12 -     18090 GGG---------------TAGGA---ACTT-
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    25983 12 +     34529 GGG---------------TAGGA---ACAT-
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    199022 12 -    288883 GGG---------------TAGGA---GCAT-
i Bison_bison.KN261452.1                                 I 1 C 0
s Bos_indicus.CM003047.1                                  20272227 12 +  48749331 GGG---------------TAGNA---GCAT-
i Bos_indicus.CM003047.1                                 I 1 C 0
s Bos_mutus.JH880303.1                                     1124787 12 -   1948126 GGG---------------TAGGA---GCAT-
i Bos_mutus.JH880303.1                                   I 1 C 0
s Bos_taurus.CM000203.6                                   18082865 12 +  45695690 GGG---------------TAGAA---GCAT-
i Bos_taurus.CM000203.6                                  I 1 C 0
s Bubalus_bubalis.KI419123.1                               2818354 12 +   4408762 GGG---------------TAGGA---GCAT-
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998805 12 -  17673402 AGG---------------AAGGA---GCTT-
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331269 12 -   7040546 AGG---------------AAGGA---GCTT-
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399545 12 -   1652518 AGG---------------AAGGA---GCTT-
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795680  3 -  60362399 TAG----------------------------
i CanFam4.chr16                                          C 0 I 3
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181737  3 -    185531 TAG----------------------------
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 I 3
s Canis_lupus_dingo.QKWQ01000480.1                         9031124  3 -   9314153 TAG----------------------------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 3
s Canis_lupus_familiaris.chr16                            17955388  3 -  59632846 TAG----------------------------
i Canis_lupus_familiaris.chr16                           C 0 I 3
s Canis_lupus_orion.HG994398.1                            18496689  3 +  63665305 TAG----------------------------
i Canis_lupus_orion.HG994398.1                           C 0 I 3
s Capra_aegagrus.CM003241.1                               18829179 12 +  46296322 GGG---------------CAGGA---GCAT-
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18059899 12 -  44709034 GGG---------------CAGGA---GCAT-
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           140940 11 -    496798 caa---------------aggaa---ga-a-
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2779 13 -     11696 TCA---------------GGAAGG-GGC-T-
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133546 11 +    179628 TAT---------------AAAAT---TA-T-
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 3
s Catagonus_wagneri.CatWag_scaffold_2839                     89119  6 +    217609 GGG---------------AAA----------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 1
s Cavia_aperea.AVPZ01000300.1                             18347365 11 -  23392119 TAG---------------AGAAG---TA-A-
i Cavia_aperea.AVPZ01000300.1                            C 0 I 3
s Cavia_porcellus.DS562891.1                              18359625 11 -  23407841 TAG---------------AGAAG---TA-A-
i Cavia_porcellus.DS562891.1                             C 0 I 3
s Cavia_tschudii.CavTsc_scaffold_8919                        98500 11 +    143979 TAG---------------AGAAG---TA-A-
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 I 3
s Cephalopachus_bancanus.k141_2037105                         4856 11 -      8605 CAA---------------AGGAA---GA-A-
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227776 14 +  27778364 TAG---------------GGAAGGACTT-T-
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2494 14 -      3715 TAG---------------GGAAGGACTT-T-
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470188 12 +   4669795 CAG---------------GGAAG---AG-AC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8737 12 -     19203 CAG---------------GGAAG---AG-AC
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3156 12 +      8260 CAG---------------GGAAG---AG-AC
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3386 12 +     27781 CAG---------------GGAAG---AG-AC
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3532 12 -     20310 CAG---------------GGAAG---AG-AC
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6516 12 +     29689 CAG---------------GGAAG---AG-AC
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             869 12 +      9989 CAG---------------GGAAG---AG-CC
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9204 12 -     27936 CAG---------------GGAAG---AG-AC
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9223 12 -     11289 CAG---------------GGAAG---AG-AC
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811599 12 +  39242232 CAG---------------GGAAG---AG-AC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217290 12 -  21565898 CAG---------------GGAAG---AG-AC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34410 12 -     53127 CAG---------------GGAAG---AG-AC
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1702 12 +      7159 CAG---------------GGAAG---AG-AC
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9215 12 -     27947 CAG---------------GGAAG---AG-AC
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9191 12 +     17596 CAG---------------GGAAG---AG-AC
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39685 12 -     41420 CAG---------------GGAAG---AG-AC
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4716 20 -      6351 CAGCGG-ATTC-G---T-GTCAG---CA-G-
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 I 2
s Cheirogaleus_major.k141_333249                             16627 11 -     52598 TAG---------------GGAAG---CA-A-
i Cheirogaleus_major.k141_333249                         C 0 I 3
s Cheirogaleus_medius.k141_1055463                           11976 11 +     57038 TAG---------------GGAAG---CA-A-
i Cheirogaleus_medius.k141_1055463                       C 0 I 3
s Chinchilla_lanigera.JH722012.1                           1248397 11 +   2543920 TAC---------------AGAAG---TG-A-
i Chinchilla_lanigera.JH722012.1                         C 0 I 3
s Chlorocebus_aethiops.ctg25                              18423154 12 -  18827391 CAG---------------GGAAG---AG-AC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9597 12 -     50209 CAG---------------GGAAG---AG-AC
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416602 12 + 135778131 CAG---------------GGAAG---AG-AC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15047 20 +     19366 CAG-GGCATTC-A---C-GTAAG---TA-A-
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 I 2
s Choloepus_hoffmanni.KN194906.1                            170146 20 +    839153 CAG-GGCATTC-A---C-GTAAG---TA-A-
i Choloepus_hoffmanni.KN194906.1                         C 0 I 2
s Chrysochloris_asiatica.ChrAsi_scaffold_172426               9144 20 -     10935 TAG-GTCACTA-A---T-GGAAG---Tg-a-
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          C 0 I 2
s Colobus_angolensis.KN981557.1                            1905122 12 +   2368649 CAG---------------GGACG---AG-AC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944740 12 + 200372422 CAG---------------GGACG---AG-AC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31634 12 +     84244 CAG---------------GGACG---AG-GC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545886 11 -  53390261 TAG---------------GAA-AG--CA-C-
i Condylura_cristata.JH655891.1                          C 0 I 2
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10397 13 -     20389 TAA---------------GAAAGGA-AC-T-
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_603213              1002 11 +      1923 GAG---------------AAA-A-A-TA-G-
i Crocidura_indochinensis.CroInd_scaffold_603213         I 116 I 12
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24147  3 -     87169 TAG----------------------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 3
s Cuniculus_paca.CunPac_flattened_line_231100                 2749 11 +      5455 TAG---------------AGAAG---TA-A-
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 I 3
s Dasyprocta_punctata.DasPun_flattened_line_206793            1132 11 +      3576 TAG---------------AGCAG---TA-A-
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 I 3
s Dasypus_novemcinctus.JH564415.1                            60960 20 +   2246927 CAGGGG-CTCC-G---G-GCAAG---CA-A-
i Dasypus_novemcinctus.JH564415.1                        C 0 I 2
s Daubentonia_madagascariensis.ctg71                      12532794 11 -  12879189 TAG---------------GGAAG---TA-A-
i Daubentonia_madagascariensis.ctg71                     C 0 I 3
s Delphinapterus_leucas.KZ290073.1                        16811082 12 +  35494412 GGG---------------TAGGA---ACTT-
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8627810 13 +  20541912 TCG---------------GGAAGGA-GC-T-
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669309 14 +   1390856 TAG---------------GGAAGGACTT-T-
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2384 14 +    198055 TAG---------------GGAAGGACTT-T-
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34190 11 +     67921 TAG---------------AGAAG---TA-A-
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 3
s Dipodomys_ordii.KN672350.1                              18895705 11 +  37912305 TTG---------------AGAAG---TA-A-
i Dipodomys_ordii.KN672350.1                             C 0 I 3
s Dipodomys_stephensi.DipSte_scaffold_75855                  11915 11 +     14536 TTG---------------AGAAG---TA-A-
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 I 3
s Dolichotis_patagonum.DolPat_scaffold_30833                 31390 11 -     42551 GGG---------------AGAAG---TA-A-
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 I 3
s Eidolon_helvum.KE759718.1                                   7316 13 +     11740 TAG---------------GGAAGGA-GC-T-
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310183 12 +    607251 GGG---------------TAGGA---GCAT-
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1088901 19 +  10337057 TAA-GT-CTCC-TA--T-GGAAC---TA---
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16325678  3 -  41312741 TAG----------------------------
i Enhydra_lutris.KZ291758.1                              C 0 I 3
s Eptesicus_fuscus.JH977646.1                              2143967 13 -  14770903 AAG---------------GGAAAGA-GC-T-
i Eptesicus_fuscus.JH977646.1                            I 293 C 0
s Equus_asinus.JREZ01000139.1                              1279651 14 +   4378816 TGG---------------GTGAGGAGCG-T-
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527472 14 -  39960074 TGG---------------GGGAGGAGCG-T-
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29487 14 +    498745 TGG---------------GGGAGGAGCG-T-
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3325257  7 -   7059049 -------------------GA-AG--TA-G-
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21199833 12 -  21539334 CAG---------------GGAAG---AG-AC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10758 12 +    133382 GGG---------------TAGGA---ACTT-
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24695 12 -     44125 GGG---------------TAGGA---ACTT-
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.AANG03299807.1                                   323  3 -       507 TAA----------------------------
i Felis_catus.AANG03299807.1                             C 0 I 3
s Felis_catus_fca126.CM031415.1                           20191901  3 + 205367284 TAG----------------------------
i Felis_catus_fca126.CM031415.1                          C 0 I 3
s Felis_nigripes.FelNig_flattened_line_20823                  5426  3 -     36744 TAG----------------------------
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 3
s Fukomys_damarensis.KN121974.1                             848401 11 +   3816255 TAG---------------AGAAA---CA-A-
i Fukomys_damarensis.KN121974.1                          C 0 I 2
s Galagoides_demidoff.k141_31856                              3101 11 -      3432 caa---------------gctac---ca-a-
i Galagoides_demidoff.k141_31856                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25364 11 +     26054 TAG---------------GTAAG---TA-A-
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 I 2
s Glis_glis.GliGli_scaffold_19807                            30254 11 +     49224 TAG---------------AGAAG---TA-A-
i Glis_glis.GliGli_scaffold_19807                        C 0 I 3
s Gorilla_beringei.k141_3596273                               9992 12 -     32273 CAA---------------TCAAG---CA-AG
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186332145 12 + 186649187 caa---------------tcaag---ca-ag
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   29983 11 +     78134 TAA---------------AGAAG---TA-A-
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 3
s Helogale_parvula.HelPar_flattened_line_2585               238063  3 +    327341 TAG----------------------------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 3
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17383 12 +     36099 GGG---------------TAGAA---GCAT-
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20659278 11 +  22651954 CAG---------------AGAAG---TA-A-
i Heterocephalus_glaber.JH602082.1                       C 0 I 3
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 134 18 +       961 CAG-G--ACACTGA--T-GGGA-----A-G-
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 I 2
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111938 12 +    128679 GCG---------------TAGGA---GCTT-
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108273 13 +   1711038 TAG---------------GGAAGG-TGC-T-
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39714 13 +     43066 TAG---------------GGAAGG-TGC-T-
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    429161 12 +    630532 CAG---------------GGAAG---AG-AG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40528  3 +     55795 TAA----------------------------
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 3
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19747 11 -    143317 TAG---------------AGAAG---TA-A-
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 3
s Hylobates_agilis.k141_307679                               12079 12 -     15490 CAG---------------GGAAG---AG-AC
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              54084 12 +     67168 CAG---------------GGAAG---AG-AC
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189537531 12 - 191637585 CAG---------------GGAAG---AG-AC
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3330629 12 -  11177569 CAG---------------GGAAG---AG-AC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80821 11 +    135385 TAG---------------AAAAG---TA-A-
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 3
s Ictidomys_tridecemlineatus.JH393364.1                    7514488 11 -   7955117 TAG---------------AGAAG---CC-A-
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 3
s Indri_indri.k141_3655594                                   18065 11 +     31101 TAG---------------AAAAG---CA-A-
i Indri_indri.k141_3655594                               C 0 I 3
s Inia_geoffrensis.IniGeo_flattened_line_48101               22299 12 +     23964 GGG---------------TAGGA---ACTT-
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271265 11 -   9596543 TAG---------------AGAAG---TA-T-
i Jaculus_jaculus.JH725527.1                             C 0 I 3
s Kogia_breviceps.KogBre_flattened_line_192630                1566 12 -      3359 GGG---------------TAGGA---ACTT-
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    12141 13 -     42476 TAA---------------GGAAAGA-GT-T-
i Lasiurus_borealis.LasBor_scaffold_32767                I 330 I 21
s Lepilemur_ankaranensis.k141_596936                          6699 11 -     23766 TAA---------------GGAAG---TA-A-
i Lepilemur_ankaranensis.k141_596936                     C 0 I 3
s Lepilemur_dorsalis.k141_577674                             24646 11 +     45836 TAA---------------GGAAG---TA-A-
i Lepilemur_dorsalis.k141_577674                         C 0 I 3
s Lepilemur_ruficaudatus.k141_420445                         31557 11 -     32627 TAG---------------GGAAG---TA-A-
i Lepilemur_ruficaudatus.k141_420445                     C 0 I 3
s Lepilemur_septentrionalis.k141_185316                      22704  8 +     54090 T------------------GAAG---TA-A-
i Lepilemur_septentrionalis.k141_185316                  C 0 I 3
s Leptonychotes_weddellii.KB714746.1                       3036011  3 +   3914936 CAG----------------------------
i Leptonychotes_weddellii.KB714746.1                     C 0 I 3
s Lepus_americanus.LepAme_scaffold_107385                     3705  7 -     14121 ttt---------------ggaa---------
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             267380 12 -    662738 GGA---------------TAGGA---ACTT-
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1431357 12 +   1826925 CAG---------------GGAAG---AG-AC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             617  9 +     11245 TAG---------------ATGTG---T----
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999452  9 +   6120653 TAG---------------ATGTG---T----
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214405 20 -  43346337 TAG-GG-CACCAG---T-GGGAG---AA-A-
i Loxodonta_africana.GL010049.1                          C 0 I 2
s Lycaon_pictus.CM007581.1                                17951628  3 -  59628241 TAG----------------------------
i Lycaon_pictus.CM007581.1                               C 0 I 3
s Macaca_arctoides.k141_2326796                               1543 12 +     40492 CAG---------------GGAGG---AG-AC
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670803 12 +  60120075 CAG---------------GGAGG---AG-AC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7301 12 -     26193 CAG---------------GGAGG---AG-AC
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75091 12 -    114318 CAG---------------GGAAG---AG-AT
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   814 12 -     23192 CAG---------------GGAGG---AG-AC
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10263 12 -     29190 CAG---------------GGAAG---AG-AC
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18834 12 +     37952 CAG---------------GGAAG---AC-AC
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833922 12 + 187317192 cag---------------ggagg---ag-ac
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452480 12 -  25927173 CAG---------------GGAAG---AC-AC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74683 12 +     89720 CAG---------------GGAAG---AC-AC
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1680 12 +     20474 CAG---------------GGAGG---AG-AC
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1481 12 -     14993 CAG---------------GGAAG---AC-AC
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324350 12 -    668171 CAG---------------GGAAG---AG-AC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15623 12 -     15935 CAG---------------GGAGG---AG-AC
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20420 12 -     45290 CAG---------------GGAAG---AC-AC
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87463 13 +     94391 TAG---------------GGAAG-AAGT-T-
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23931973 12 -  24302211 CAG---------------GGAAG---AG-AC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346153 12 +    752769 CAG---------------GGAAG---AG-AC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15516  3 +    737560 TAG----------------------------
i Manis_javanica.JSZB01003497.1                          C 0 I 3
s Manis_pentadactyla.KN006162.1                              46905  3 -    317179 TAG----------------------------
i Manis_pentadactyla.KN006162.1                          C 0 I 3
s Marmota_marmota.CZRN01000018.1                          33097338 11 -  40650429 TAG---------------AGAAG---CC-A-
i Marmota_marmota.CZRN01000018.1                         C 0 I 3
s Megaderma_lyra.MegLyr_scaffold_4542                         6695 13 -    207569 TAG---------------GGAAGGA-CT-C-
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6143  3 +     13704 TAG----------------------------
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 3
s Mesoplodon_bidens.MesBid_scaffold_108144                    2967 12 +     10310 GGG---------------TAGGA---ACTT-
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18283225 11 -  93316391 TAG---------------GGAAG---CA-A-
i Microcebus_murinus.CM007674.1                          C 0 I 3
s Microgale_talazaci.MicTal_scaffold_6613                    15382 17 -    145209 TA--TC-ACTA-A---T-GGAAA---TG---
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 2
s Micronycteris_hirsuta.MicHir_scaffold_52381                13321 13 -     19307 TCG---------------GGAAGGA-GC-A-
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1848995 13 +   8254450 TAG---------------GGAAGGA-GC-T-
i Miniopterus_natalensis.LDJU01000034.1                  I 235 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32871 13 +     64694 TAG---------------GGAAGGA-GC-T-
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 242 C 0
s Miopithecus_ogouensis.k141_534055                           3710 12 -     28506 CAG---------------GGAAG---AG-AC
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62341  3 -     63350 CAG----------------------------
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 I 3
s Mirza_zaza.k141_952172                                      4580 11 -     37649 TAG---------------GGAAG---CA-A-
i Mirza_zaza.k141_952172                                 C 0 I 3
s Monodon_monoceros.MonMon_M_scaffold_103                    26472 12 -    437263 GGG---------------TAGGA---ACTT-
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137727 13 -    366855 CCG---------------GGAAGGA-AC-T-
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_61429                  27323 12 -     27816 GGG---------------TAGGA---GCAT-
i Moschus_moschiferus.MosMos_scaffold_61429              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31264  3 +     37127 TAG----------------------------
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 3
s Murina_feae.MurFea_scaffold_85699                           5030 13 +     14753 TGG---------------GGAAAGA-GC-T-
i Murina_feae.MurFea_scaffold_85699                      I 209 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2247 11 +     14296 GAG---------------AGAAG---TA-A-
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 3
s Mustela_putorius.JH418006.1                               297573  3 -  14710649 TAG----------------------------
i Mustela_putorius.JH418006.1                            C 0 I 3
s Myotis_brandtii.KE162005.1                                278202 13 -  10118263 TAG---------------GGAAAGA-GC-T-
i Myotis_brandtii.KE162005.1                             I 271 C 0
s Myotis_davidii.KB100139.1                                1585759 13 -   6019432 NNN---------------GGAAAGA-GC-T-
i Myotis_davidii.KB100139.1                              I 257 C 0
s Myotis_lucifugus.GL429869.1                              3901968 13 -   4330536 TAG---------------CGAAAGA-GT-T-
i Myotis_lucifugus.GL429869.1                            I 249 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32527 13 +     33610 TAG---------------GGAAAGA-TC-T-
i Myotis_myotis.MyoMyo_scaffold_28916                    I 259 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              185998 20 +    196477 TAT-GGCATCC-A---T-GTACG---TA-A-
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 I 2
s Nannospalax_galili.KL204047.1                            2025418 11 -   3037898 TAT---------------AGAAG---TA-A-
i Nannospalax_galili.KL204047.1                          C 0 I 3
s Nasalis_larvatus.k141_413338                                9723 12 +     21681 CAA---------------GGAAG---AG-AC
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865428 12 +   7148211 GGG---------------TAGGA---ACTT-
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756292 13 +    783361 TCA---------------GGAAG-AAAC-T-
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145889  3 -   9404916 TAG----------------------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 3
s Nycticebus_bengalensis.LG01                            102574421  9 - 196305487 TAG---------------ATGTG---T----
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2107  9 +      8486 TAG---------------ATGTG---T----
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744848  9 + 199412804 TAG---------------ATGTG---T----
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355499  7 +   3988456 ttt---------------ggaa---------
i Ochotona_princeps.JH802162.1                           C 0 I 172
s Odobenus_rosmarus.KB229312.1                              500630  3 -   2017862 TAG----------------------------
i Odobenus_rosmarus.KB229312.1                           C 0 I 3
s Odocoileus_virginianus.KZ100018.1                         144556 12 +    630418 GGG---------------TAGGA---GCAT-
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  2781343 12 -  10937097 GGG---------------TAGGA---ACTT-
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6730 20 -     18566 TAG-G---TCC-CAAAT-GGAAG---TA-A-
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 I 2
s Oryctolagus_cuniculus.CM000791.1                        67144549  7 + 174332312 ttt---------------ggaa---------
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458643  3 -    559221 TAG----------------------------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 3
s Ovis_aries.CM001607.2                                   17584914 12 +  44047080 GGG---------------TAGAA---GCAT-
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173335 12 -    191736 GGG---------------TAGAA---GCAT-
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    36106 12 +     80009 CAG---------------GGAAG---AA-AG
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189137058 12 + 189151597 CAG---------------GGAAG---AG-AG
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  147048  3 +    230217 TAG----------------------------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 3
s Panthera_pardus.KV860321.1                                259757  3 +  18783137 TAG----------------------------
i Panthera_pardus.KV860321.1                             C 0 I 3
s Panthera_tigris.KE722367.1                               4716904  3 -   8748460 TAG----------------------------
i Panthera_tigris.KE722367.1                             C 0 I 3
s Pantholops_hodgsonii.KE114653.1                          1264268 12 -   2937107 GGG---------------TAGGA---GCAT-
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183437297 12 + 183742232 CAG---------------GGAAG---AG-AC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1359 12 +     20448 CAG---------------GGAAG---AG-AC
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20557981 12 +  20919399 CAG---------------GGAAG---AG-AC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                    102 12 +     41871 CAG---------------GGAAG---AG-AC
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     3391 12 +     27711 CAG---------------GGAAG---AG-AC
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  3380 12 +      9205 CAG---------------GGAAG---AG-AC
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8784  3 -     78924 TAG----------------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 3
s Perodicticus_ibeanus.k141_855320                            4599  9 +     13100 TAT---------------ATGTG---T----
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             2967  9 +     25941 TAT---------------ATGTG---T----
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25262 11 +     32600 TTA---------------AGAAG---TA-A-
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 I 3
s Petromus_typicus.PetTyp_scaffold_42190                     25748 10 -     29689 TAG---------------AGAA----CA-G-
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 I 3
s Phocoena_phocoena.PhoPho_flattened_line_24159               8390 12 +     63832 GGG---------------TAGGA---ACTT-
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38239 12 +     62158 CAG---------------GGACG---AG-AC
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        32966 12 +     89929 CAG---------------GGACG---AG-AC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34382 12 +     51399 CAG---------------GGACG---AG-AC
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290603 12 -  14605196 CAG---------------GGACG---AG-AC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              341 13 +     22620 TGA---------------GGCAAGA-GC-T-
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        N 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34096 12 +     35617 GGG---------------TAGGA---ACTT-
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189125144 12 + 189387572 CAG---------------GGAAT---AG-AG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9564987 12 +   9816681 CAG---------------GGAAT---AG-AG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               67883 12 -     81375 CAA---------------GGAAG---AG-AC
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9710 12 +     10147 CAA---------------GGAAG---AG-AC
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9895 18 -     22811 CAG-G--ACACTG---ACGGGA-----A-G-
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 I 2
s Propithecus_coquerelli.NW_012148875.1                     986279 11 +   2598838 TAG---------------AGAAG---CA-A-
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 3
s Propithecus_coronatus.k141_347390                          24568 11 +     38485 TAG---------------AGAAG---CA-A-
i Propithecus_coronatus.k141_347390                      C 0 I 3
s Propithecus_diadema.k141_357118                              729 11 +      4256 TAG---------------AGAAG---CA-A-
i Propithecus_diadema.k141_357118                        C 0 I 3
s Propithecus_edwardsi.k141_1176054                          22087 11 +     35766 TAG---------------AGAAG---CA-A-
i Propithecus_edwardsi.k141_1176054                      C 0 I 3
s Propithecus_perrieri.k141_1200571                            270 11 -     24134 TAG---------------AGAAG---CA-A-
i Propithecus_perrieri.k141_1200571                      C 0 I 3
s Propithecus_tattersalli.k141_790011                        24082 11 -     67325 TAG---------------AGAAG---CA-A-
i Propithecus_tattersalli.k141_790011                    C 0 I 3
s Propithecus_verreauxi.k141_956661                            327 11 -      6182 TAG---------------AGAAG---CA-A-
i Propithecus_verreauxi.k141_956661                      C 0 I 3
s Pteronotus_parnellii.KE909381.1                            11109 13 -     21811 TCA---------------GGAAGCA-GG-T-
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36584  3 +     42204 TAG----------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 3
s Pteropus_alecto.KB030862.1                              22973586 13 +  28871421 TAG---------------AGAAGGA-GC-T-
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1523 13 -      8028 TAG---------------AGAAGGA-GC-T-
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20270215  3 -  38429054 TAG----------------------------
i Puma_concolor.QAVW01001104.1                           C 0 I 3
s Pygathrix_cinerea.k141_1153803                              9712 12 -     91421 CAA---------------GGAAG---AG-AC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603846 12 +   7812017 CAA---------------GGAAG---AG-AC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9685 12 -     72585 CAA---------------GGAAG---AG-AC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4804 12 +     55207 GGG---------------TAGGA---GCAT-
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        366819 12 -   3329780 TAG----------------TAAGGA-GC-T-
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 5
s Rhinopithecus_bieti.k119_217274                             1098 12 -     11128 CAA---------------GGAAG---AG-AC
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230475 12 - 195417433 CAA---------------GGAAG---AG-AC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7666183 12 +   7961872 CAA---------------GGAAG---AG-AC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84571 13 -     96226 TAG---------------GGAAGGA-GC-T-
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3457 12 +      4321 GGG---------------TAGGA---GCAT-
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151309 11 -    313613 TAG---------------GGA-C-A-CA-C-
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 2
s Semnopithecus_entellus.k141_11662                          14227 12 -     19888 CAA---------------GGAAG---AG-AC
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21432 12 +     39453 CAA---------------GGAAG---AG-AC
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            1956 12 +     27826 CAA---------------GGAAG---AG-AC
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1478 12 -     19483 CAA---------------GGAAG---AG-AC
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1540 12 +      7198 CAA---------------GGAAG---AG-AC
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9800 12 +     15514 CAA---------------GGAAG---AG-AC
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187595 10 -    191337 TAA---------------GTA-A---CA-A-
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13646949 11 -  18376816 TAG---------------AAT-AG--TT-T-
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1948130 11 -   3870691 TAG---------------AGAAG---CC-A-
i Spermophilus_dauricus.KZ294078.1                       C 0 I 3
s Spilogale_gracilis.SpiGra_flattened_line_13525             27127  3 +     97271 TAG----------------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 3
s Suricata_suricatta.SurSur_flattened_line_6629              14133  3 -    196729 TAG----------------------------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 3
s Sus_scrofa.CM000828.4                                   62882382  6 -  69701581 GGG---------------AAG----------
i Sus_scrofa.CM000828.4                                  C 0 I 1
s Symphalangus_syndactylus.tarseq_199                      1087776 12 -   1523678 CAG---------------GGAAG---AG-AG
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6725 13 +     41958 TAG---------------GGAAGGA-GA-G-
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69360 20 +    116680 CAT-GGCATT--GA--T-GTATG---TA-A-
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 I 2
s Tapirus_indicus.TapInd_scaffold_9301                      115106 14 -    156842 TAG---------------GGAAGGAGCT-T-
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383561 14 +    539355 TAG---------------GGAAGGAGCT-T-
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10555 11 +     70052 CAA---------------AGGAA---GA-A-
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               14860 11 +     25099 CAA---------------AGGAA---GA-A-
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422806 12 + 186847797 CAG---------------GGAAG---AC-AC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103088 11 +    114563 TAG---------------AGAAG---TA-A-
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 3
s Tolypeutes_matacus.TolMat_scaffold_228639                   1774 20 +      8208 CAGTGG-AGTC-A---T-GTCAG---CA-A-
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 I 2
s Tonatia_saurophila.TonSau_scaffold_294                     78866 12 +    610378 TCA---------------GGAAGGA-GC---
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          5537 12 -     20410 CAA---------------GGAAG---AG-AC
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9729 12 +     15221 CAA---------------GGAAG---AG-AC
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5637 12 +     19930 CAA---------------GGAAG---AG-AC
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2064 12 -     19997 CAA---------------GGAAG---AG-AC
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42183 12 -     60166 CAA---------------GGAAG---AG-AC
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9655 12 -     27529 CAA---------------GGAAG---AG-AC
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9595 12 -     18194 CAA---------------GGAAG---AG-AC
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3331 12 -     21137 CAA---------------GGAAG---AG-AC
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2033 12 -     10723 CAA---------------GGAAG---AG-AC
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1186 12 +      9834 CAA---------------GGAAG---AG-AC
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19504 12 +     32220 CAA---------------GGAAG---AG-AC
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933601 12 +   6242583 CAA---------------GGAAG---AG-AC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2846 12 +     20839 CAA---------------GGAAG---AG-AC
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    383 12 -      1748 GTG---------------TGGGA---TGTT-
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 I 220
s Tupaia_chinensis.KB320699.1                              2149492 11 +   4065304 CAG---------------GGAAG---TA-G-
i Tupaia_chinensis.KB320699.1                            C 0 I 2
s Tupaia_tana.TupTan_flattened_line_97126                     3111 11 -     10553 CAG---------------GGAAG---TA-G-
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 2
s Tursiops_truncatus.MRVK01000835.1                       15737590 12 +  33153633 GGG---------------TAGGA---ACTT-
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_97021                    1809 11 -      4736 TGG---------------GTA-A-A-CA-T-
i Uropsilus_gracilis.UroGra_scaffold_97021               C 0 I 2
s Ursus_maritimus.KK499267.1                               4846827  3 -   5085361 TAG----------------------------
i Ursus_maritimus.KK499267.1                             C 0 I 3
s Vicugna_pacos.KN270157.1                                 5368294 12 -   5488506 AGG---------------AAGGA---GCTT-
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7304  3 -     43706 TAG----------------------------
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 3
s Xerus_inauris.XerIna_scaffold_48378                        19625 11 -     24430 TAG---------------AGAAG---CC-A-
i Xerus_inauris.XerIna_scaffold_48378                    C 0 I 3
s Zalophus_californianus.ZalCal_flattened_line_63728          1752  3 +      2932 TAG----------------------------
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 I 3
s Zapus_hudsonius.ZapHud_scaffold_11398                       9899 11 +     63895 TAG---------------AGAAA---TA-G-
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 3
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11282 12 +     12536 GGG---------------TAGGA---ACTT-
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                        756 1 +     62944 A
s Allochrocebus_lhoesti.k141_4309873                          9156 1 -     28001 A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9282 1 -      9772 A
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            439 1 -     12518 A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7182 1 +     20879 G
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 3 C 0
s Avahi_laniger.k141_765380                                  49222 1 -     92717 G
i Avahi_laniger.k141_765380                              I 3 C 0
s Avahi_peyrierasi.k141_1424874                              49847 1 +     85213 G
i Avahi_peyrierasi.k141_1424874                          I 3 C 0
s Carlito_syrichta.NW_007259797.1                           140951 1 -    496798 a
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133560 1 +    179628 T
i Castor_canadensis.CasCan_scaffold_2074                 I 3 C 0
s Cavia_aperea.AVPZ01000300.1                             18347379 1 -  23392119 A
i Cavia_aperea.AVPZ01000300.1                            I 3 C 0
s Cavia_porcellus.DS562891.1                              18359639 1 -  23407841 A
i Cavia_porcellus.DS562891.1                             I 3 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98514 1 +    143979 A
i Cavia_tschudii.CavTsc_scaffold_8919                    I 3 C 0
s Cephalopachus_bancanus.k141_2037105                         4867 1 -      8605 A
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470200 1 +   4669795 A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8749 1 -     19203 A
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3168 1 +      8260 A
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3398 1 +     27781 A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3544 1 -     20310 A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6528 1 +     29689 G
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             881 1 +      9989 A
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9216 1 -     27936 A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9235 1 -     11289 G
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811611 1 +  39242232 G
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217302 1 -  21565898 G
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34422 1 -     53127 G
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1714 1 +      7159 A
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9227 1 -     27947 G
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9203 1 +     17596 G
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39697 1 -     41420 G
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4738 1 -      6351 C
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       I 2 C 0
s Cheirogaleus_major.k141_333249                             16641 1 -     52598 G
i Cheirogaleus_major.k141_333249                         I 3 C 0
s Cheirogaleus_medius.k141_1055463                           11990 1 +     57038 G
i Cheirogaleus_medius.k141_1055463                       I 3 C 0
s Chinchilla_lanigera.JH722012.1                           1248411 1 +   2543920 A
i Chinchilla_lanigera.JH722012.1                         I 3 C 0
s Chlorocebus_aethiops.ctg25                              18423166 1 -  18827391 A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9609 1 -     50209 A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416614 1 + 135778131 A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15069 1 +     19366 T
i Choloepus_didactylus.ChoDid_scaffold_45914             I 2 C 0
s Choloepus_hoffmanni.KN194906.1                            170168 1 +    839153 T
i Choloepus_hoffmanni.KN194906.1                         I 2 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_172426               9166 1 -     10935 t
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          I 2 C 0
s Colobus_angolensis.KN981557.1                            1905134 1 +   2368649 A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944752 1 + 200372422 A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31646 1 +     84244 A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2763 1 +      5455 A
i Cuniculus_paca.CunPac_flattened_line_231100            I 3 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1146 1 +      3576 A
i Dasyprocta_punctata.DasPun_flattened_line_206793       I 3 C 0
s Dasypus_novemcinctus.JH564415.1                            60982 1 +   2246927 C
i Dasypus_novemcinctus.JH564415.1                        I 2 C 0
s Daubentonia_madagascariensis.ctg71                      12532808 1 -  12879189 A
i Daubentonia_madagascariensis.ctg71                     I 3 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34204 1 +     67921 A
i Dinomys_branickii.DinBra_scaffold_21862                I 3 C 0
s Dipodomys_ordii.KN672350.1                              18895719 1 +  37912305 A
i Dipodomys_ordii.KN672350.1                             I 3 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  11929 1 +     14536 A
i Dipodomys_stephensi.DipSte_scaffold_75855              I 3 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31404 1 -     42551 A
i Dolichotis_patagonum.DolPat_scaffold_30833             I 3 C 0
s Erythrocebus_patas.Contig38                             21199845 1 -  21539334 A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Galagoides_demidoff.k141_31856                              3112 1 -      3432 a
i Galagoides_demidoff.k141_31856                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25377 1 +     26054 G
i Galeopterus_variegatus.GalVar_scaffold_56069           I 2 C 0
s Glis_glis.GliGli_scaffold_19807                            30268 1 +     49224 A
i Glis_glis.GliGli_scaffold_19807                        I 3 C 0
s Gorilla_beringei.k141_3596273                              10004 1 -     32273 G
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186332157 1 + 186649187 g
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   29997 1 +     78134 A
i Graphiurus_murinus.GraMur_scaffold_10447               I 3 C 0
s Heterocephalus_glaber.JH602082.1                        20659292 1 +  22651954 A
i Heterocephalus_glaber.JH602082.1                       I 3 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 154 1 +       961 T
i Heterohyrax_brucei.HetBruBak_scaffold_383740           I 2 C 0
s Hoolock_leuconedys.ctg274                                    429173 1 +    630532 A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19761 1 -    143317 A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 3 C 0
s Hylobates_agilis.k141_307679                               12091 1 -     15490 A
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              54096 1 +     67168 A
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189537543 1 - 191637585 A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3330641 1 -  11177569 A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80835 1 +    135385 A
i Hystrix_cristata.HysCri_scaffold_5660                  I 3 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514502 1 -   7955117 G
i Ictidomys_tridecemlineatus.JH393364.1                  I 3 C 0
s Indri_indri.k141_3655594                                   18079 1 +     31101 A
i Indri_indri.k141_3655594                               I 3 C 0
s Jaculus_jaculus.JH725527.1                               8271279 1 -   9596543 G
i Jaculus_jaculus.JH725527.1                             I 3 C 0
s Lepilemur_ankaranensis.k141_596936                          6713 1 -     23766 G
i Lepilemur_ankaranensis.k141_596936                     I 3 C 0
s Lepilemur_dorsalis.k141_577674                             24660 1 +     45836 G
i Lepilemur_dorsalis.k141_577674                         I 3 C 0
s Lepilemur_ruficaudatus.k141_420445                         31571 1 -     32627 A
i Lepilemur_ruficaudatus.k141_420445                     I 3 C 0
s Lepilemur_septentrionalis.k141_185316                      22715 1 +     54090 G
i Lepilemur_septentrionalis.k141_185316                  I 3 C 0
s Lophocebus_aterrimus.ctg367                              1431369 1 +   1826925 A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                            4214427 1 -  43346337 T
i Loxodonta_africana.GL010049.1                          I 2 C 0
s Macaca_arctoides.k141_2326796                               1555 1 +     40492 A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670815 1 +  60120075 A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7313 1 -     26193 A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75103 1 -    114318 A
i Macaca_fascicularis.k141_814140                        C 0 I 4
s Macaca_fuscata.k119_255327                                   826 1 -     23192 A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10275 1 -     29190 A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18846 1 +     37952 A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833934 1 + 187317192 A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452492 1 -  25927173 A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74695 1 +     89720 A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1692 1 +     20474 A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1493 1 -     14993 A
i Macaca_siberu.k141_635500                              C 0 I 9
s Macaca_silenus.Contig273                                  324362 1 -    668171 A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15635 1 -     15935 A
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20432 1 -     45290 A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23931985 1 -  24302211 A
i Mandrillus_leucophaeus.scaffold280                     C 0 I 2
s Mandrillus_sphinx.Contig270                               346165 1 +    752769 A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097352 1 -  40650429 A
i Marmota_marmota.CZRN01000018.1                         I 3 C 0
s Microcebus_murinus.CM007674.1                           18283239 1 -  93316391 A
i Microcebus_murinus.CM007674.1                          I 3 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    15401 1 -    145209 T
i Microgale_talazaci.MicTal_scaffold_6613                I 2 C 0
s Miopithecus_ogouensis.k141_534055                           3722 1 -     28506 G
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirza_zaza.k141_952172                                      4594 1 -     37649 A
i Mirza_zaza.k141_952172                                 I 3 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2261 1 +     14296 A
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 3 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186020 1 +    196477 C
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 2 C 0
s Nannospalax_galili.KL204047.1                            2025432 1 -   3037898 G
i Nannospalax_galili.KL204047.1                          I 3 C 0
s Nasalis_larvatus.k141_413338                                9735 1 +     21681 A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6752 1 -     18566 T
i Orycteropus_afer.OryAfe_flattened_line_144387          I 2 C 0
s Pan_paniscus.KQ411613.1                                    36118 1 +     80009 A
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189137070 1 + 189151597 A
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                183437309 1 + 183742232 A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1371 1 +     20448 A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20557993 1 +  20919399 A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                    114 1 +     41871 A
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     3403 1 +     27711 A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  3392 1 +      9205 A
i Papio_ursinus.k141_3428135                             C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25276 1 +     32600 G
i Perognathus_longimembris.PerPac_flattened_line_34437   I 3 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25761 1 -     29689 A
i Petromus_typicus.PetTyp_scaffold_42190                 I 3 C 0
s Piliocolobus_badius.k141_1234363                           38251 1 +     62158 A
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        32978 1 +     89929 A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34394 1 +     51399 A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290615 1 -  14605196 A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189125156 1 + 189387572 A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9564999 1 +   9816681 A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               67895 1 -     81375 A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9722 1 +     10147 A
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9915 1 -     22811 T
i Procavia_capensis.ProCapCap_scaffold_85530             I 2 C 0
s Propithecus_coquerelli.NW_012148875.1                     986293 1 +   2598838 A
i Propithecus_coquerelli.NW_012148875.1                  I 3 C 0
s Propithecus_coronatus.k141_347390                          24582 1 +     38485 A
i Propithecus_coronatus.k141_347390                      I 3 C 0
s Propithecus_diadema.k141_357118                              743 1 +      4256 A
i Propithecus_diadema.k141_357118                        I 3 C 0
s Propithecus_edwardsi.k141_1176054                          22101 1 +     35766 A
i Propithecus_edwardsi.k141_1176054                      I 3 C 0
s Propithecus_perrieri.k141_1200571                            284 1 -     24134 A
i Propithecus_perrieri.k141_1200571                      I 3 C 0
s Propithecus_tattersalli.k141_790011                        24096 1 -     67325 A
i Propithecus_tattersalli.k141_790011                    I 3 C 0
s Propithecus_verreauxi.k141_956661                            341 1 -      6182 A
i Propithecus_verreauxi.k141_956661                      I 3 C 0
s Pygathrix_cinerea.k141_1153803                              9724 1 -     91421 A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603858 1 +   7812017 A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9697 1 -     72585 A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             1110 1 -     11128 A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230487 1 - 195417433 A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7666195 1 +   7961872 A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Semnopithecus_entellus.k141_11662                          14239 1 -     19888 A
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21444 1 +     39453 A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            1968 1 +     27826 A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1490 1 -     19483 A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1552 1 +      7198 A
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9812 1 +     15514 A
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1948144 1 -   3870691 G
i Spermophilus_dauricus.KZ294078.1                       I 3 C 0
s Symphalangus_syndactylus.tarseq_199                      1087788 1 -   1523678 A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69382 1 +    116680 T
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 2 C 0
s Tarsius_lariang.k141_2201908                               10566 1 +     70052 A
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               14871 1 +     25099 A
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422818 1 + 186847797 A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103102 1 +    114563 A
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 3 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   1796 1 +      8208 C
i Tolypeutes_matacus.TolMat_scaffold_228639              I 2 C 0
s Trachypithecus_auratus.k141_722599                          5549 1 -     20410 A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9741 1 +     15221 A
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5649 1 +     19930 A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2076 1 -     19997 A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42195 1 -     60166 A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9667 1 -     27529 A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9607 1 -     18194 A
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3343 1 -     21137 A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2045 1 -     10723 A
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1198 1 +      9834 A
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19516 1 +     32220 A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933613 1 +   6242583 A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2858 1 +     20839 A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2149505 1 +   4065304 G
i Tupaia_chinensis.KB320699.1                            I 2 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     3124 1 -     10553 G
i Tupaia_tana.TupTan_flattened_line_97126                I 2 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19639 1 -     24430 G
i Xerus_inauris.XerIna_scaffold_48378                    I 3 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9913 1 +     63895 G
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 3 C 0
e Loris_tardigradus.ctg83                                   999461 0 +   6120653 C
e Loris_lydekkerianus.k141_2539221                             626 0 +     11245 C
e Perodicticus_potto.k141_1092580                             2976 0 +     25941 C
e Perodicticus_ibeanus.k141_855320                            4608 0 +     13100 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            11294 0 +     12536 C
e Zalophus_californianus.ZalCal_flattened_line_63728          1755 3 +      2932 I
e Vulpes_lagopus.VulLag_flattened_line_30954                  7307 3 -     43706 I
e Vicugna_pacos.KN270157.1                                 5368306 0 -   5488506 C
e Varecia_variegata.k141_1128296                              7155 0 +     24756 C
e Varecia_rubra.k141_590885                                   7107 0 +     50397 C
e Ursus_maritimus.KK499267.1                               4846830 3 -   5085361 I
e Uropsilus_gracilis.UroGra_scaffold_97021                    1820 2 -      4736 I
e Tursiops_truncatus.MRVK01000835.1                       15737602 0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                    395 220 -      1748 I
e Tonatia_saurophila.TonSau_scaffold_294                     78878 0 +    610378 C
e Tapirus_terrestris.TapTer_scaffold_755                    383575 0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      115120 0 -    156842 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                 6738 0 +     41958 C
e Sus_scrofa.CM000828.4                                   62882388 1 -  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629              14136 3 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             27130 3 +     97271 I
e Sorex_araneus.JH798187.1                                13646960 0 -  18376816 C
e Solenodon_paradoxus.SolPar_flattened_line_5840            187605 0 -    191337 C
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    151320 2 -    313613 I
e Saiga_tatarica.SaiTat_scaffold_373180                       3469 0 +      4321 C
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                84584 0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        366831 5 -   3329780 I
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4816 0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20270218 3 -  38429054 I
e Pteropus_vampyrus.KN534172.1                                1536 0 -      8028 C
e Pteropus_alecto.KB030862.1                              22973599 0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         36587 3 +     42204 I
e Pteronotus_parnellii.KE909381.1                            11122 0 -     21811 C
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414 0 -   4620579 C
e Platanista_gangetica.PlaMin_flattened_line_32310           34108 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              354 0 +     22620 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               8402 0 +     63832 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8787 3 -     78924 I
e Pantholops_hodgsonii.KE114653.1                          1264280 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4716907 3 -   8748460 I
e Panthera_pardus.KV860321.1                                259760 3 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  147051 3 +    230217 I
e Ovis_canadensis.OviCan_scaffold_2572                      173347 0 -    191736 C
e Ovis_aries.CM001607.2                                   17584926 0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       458646 3 -    559221 I
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Orcinus_orca.KB316932.1                                  2781355 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144568 0 +    630418 C
e Odobenus_rosmarus.KB229312.1                              500633 3 -   2017862 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1355506 172 +   3988456 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744857 0 + 199412804 C
e Nycticebus_coucang.k141_5327727                             2116 0 +      8486 C
e Nycticebus_bengalensis.LG01                            102574430 0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9145892 3 -   9404916 I
e Noctilio_leporinus.NocLep_scaffold_251                    756305 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5865440 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myotis_myotis.MyoMyo_scaffold_28916                        32540 0 +     33610 C
e Myotis_lucifugus.GL429869.1                              3901981 0 -   4330536 C
e Myotis_davidii.KB100139.1                                1585772 0 -   6019432 C
e Myotis_brandtii.KE162005.1                                278215 0 -  10118263 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               297576 3 -  14710649 I
e Murina_feae.MurFea_scaffold_85699                           5043 0 +     14753 C
e Mungos_mungo.MunMun_flattened_line_23663                   31267 3 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_61429                  27335 0 -     27816 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 137740 0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    26484 0 -    437263 C
e Mirounga_angustirostris.MirAng_flattened_line_22144        62344 3 -     63350 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             32884 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849008 0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                13334 0 -     19307 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    2979 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365              6146 3 +     13704 I
e Megaderma_lyra.MegLyr_scaffold_4542                         6708 0 -    207569 C
e Manis_pentadactyla.KN006162.1                              46908 3 -    317179 I
e Manis_javanica.JSZB01003497.1                              15519 3 +    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_8222                 87476 0 +     94391 C
e Lycaon_pictus.CM007581.1                                17951631 3 -  59628241 I
e Lipotes_vexillifer.KE559953.1                             267392 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3036014 3 +   3914936 I
e Lemur_catta.scaffold_24                                 15519761 0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12154 21 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                1578 0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               22311 0 +     23964 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  40531 3 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_29171               39727 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       108286 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               111950 0 +    128679 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17395 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               238066 3 +    327341 I
e Hapalemur_occidentalis.k141_907772                          9234 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402 0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298 0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517 0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Fukomys_damarensis.KN121974.1                             848412 2 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  5429 3 -     36744 I
e Felis_catus_fca126.CM031415.1                           20191904 3 + 205367284 I
e Eulemur_sanfordi.k141_1122526                               9432 0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267 0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247 0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321 0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369 0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369 0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184 0 -     25546 C
e Eulemur_collaris.k141_377015                                2154 0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453 0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             24707 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           10770 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3325264 0 -   7059049 C
e Equus_przewalskii.KK951119.1                               29501 0 +    498745 C
e Equus_caballus.CM000403.2                               18527486 0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1279665 0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2143980 0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16325681 3 -  41312741 I
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1088920 0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       310195 0 +    607251 C
e Eidolon_helvum.KE759718.1                                   7329 0 +     11740 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    2398 0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  669323 0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8627823 0 +  20541912 C
e Delphinapterus_leucas.KZ290073.1                        16811094 0 +  35494412 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             24150 3 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_603213              1013 12 +      1923 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          10410 0 -     20389 C
e Condylura_cristata.JH655891.1                           17545897 2 -  53390261 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2508 0 -      3715 C
e Catagonus_wagneri.CatWag_scaffold_2839                     89125 1 +    217609 I
e Carollia_perspicillata.CarPer_scaffold_92756                2792 0 -     11696 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18059911 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18829191 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18496692 3 +  63665305 I
e Canis_lupus_familiaris.chr16                            17955391 3 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9031127 3 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    181740 3 -    185531 I
e CanFam4.chr16                                           17795683 3 -  60362399 I
e Camelus_ferus.KB017975.1                                  399557 0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2331281 0 -   7040546 C
e Camelus_bactrianus.KN276810.1                            9998817 0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2818366 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18082877 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1124799 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20272239 0 +  48749331 C
e Bison_bison.KN261452.1                                    199034 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    25995 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         1924 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15191458 0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  2374 0 +     43469 C
e Arctocebus_calabarensis.k141_288239                        14375 0 +     17124 C
e Antilocapra_americana.AntAmePen_scaffold_12469             97525 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183022 0 +    412891 C
e Ammotragus_lervia.NIVO01071767.1                          675073 0 -   2318259 C
e Allenopithecus_nigroviridis.k141_3361533                    9230 0 -     52922 C
e Allactaga_bullata.AllBul_scaffold_9566                     64907 1 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             75119 3 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9506896 3 -  29979442 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           823204 3 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                        757 19 +     62944 G-TG-----T-TGTG--G---TAAGCA--------------------CA-----------CC
s Acinonyx_jubatus.LLWD01001279.1                           823207 20 -   1699592 GGCC-----C-TGTG--A---TGAGCA--------------------CA-----------CC
i Acinonyx_jubatus.LLWD01001279.1                        I 3 I 1
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506899 20 -  29979442 GGCC-----C-TGGG--A---TGAACA--------------------CA-----------CC
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 3 I 6
s Ailurus_fulgens.LNAC01001112.1                             75122 20 -    347723 GGTC-----C-TGAG--A---TGAACA--------------------CA-----------CC
i Ailurus_fulgens.LNAC01001112.1                         I 3 I 1
s Allactaga_bullata.AllBul_scaffold_9566                     64908 10 -     89534 ---------------------TAAACA--------------------CA-----------CA
i Allactaga_bullata.AllBul_scaffold_9566                 I 1 I 5
s Allenopithecus_nigroviridis.k141_3361533                    9230 19 -     52922 G-TG-----T-TGTG--G---TAAGCA--------------------CA-----------CC
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9157 19 -     28001 G-CG-----T-TGTG--G---TAAGCA--------------------CA-----------CC
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9283 19 -      9772 G-TG-----T-TGTG--G---TAAGCA--------------------CA-----------CC
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            440 19 -     12518 G-TG-----T-TGTG--G---TAAGCA--------------------CA-----------CC
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675073 20 -   2318259 GTCC-----C-TGTG--A---TAAACA--------------------CA-----------CA
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 1
s Anoura_caudifer.AnoCau_scaffold_1412                      183022 20 +    412891 TGGC-----C-TGTG--A---TAAACA--------------------TA-----------CC
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 1
s Antilocapra_americana.AntAmePen_scaffold_12469             97525 20 -    100397 AGCC-----C-TGTG--A---TAAACA--------------------CA-----------CC
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 I 1
s Aplodontia_rufa.AprRuf_scaffold_68852                       7183 19 +     20879 G-TC-----C-TGTG--A---TAAACA--------------------CA-----------CC
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 1
s Arctocebus_calabarensis.k141_288239                        14375  6 +     17124 -------------------------CC--------------------AA-----------CA
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2374 20 +     43469 TGGC-----C-TGTG--A---TAAACA--------------------TA-----------CC
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 1
s Avahi_laniger.k141_765380                                  49223 20 -     92717 G-TC-----C-TAAG--A---CAAGCA--------------------CA-----C-----CT
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              49848 20 +     85213 G-TC-----C-TAAG--A---CAAGCA--------------------CA-----C-----CT
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191458 20 +  23207421 GGCC-----T-TGTA--A---TAAACA--------------------CA-----------CC
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 1
s Balaenoptera_bonaerensis.DF707048.1                         1924 20 -     18090 GGCC-----T-TGTA--A---TAAACA--------------------CA-----------CC
i Balaenoptera_bonaerensis.DF707048.1                    C 0 I 1
s Beatragus_hunteri.BeaHun_scaffold_50177                    25995 20 +     34529 GTCC-----C-TGTG--A---TAAACA--------------------CA-----------CA
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 1
s Bison_bison.KN261452.1                                    199034 20 -    288883 GGCC-----C-TGTG--A---TAAACA--------------------CA-----------CA
i Bison_bison.KN261452.1                                 C 0 I 1
s Bos_indicus.CM003047.1                                  20272239 20 +  48749331 GGCC-----C-TGTG--A---TAAACA--------------------CA-----------CA
i Bos_indicus.CM003047.1                                 C 0 I 1
s Bos_mutus.JH880303.1                                     1124799 20 -   1948126 GGCC-----C-TGTG--A---TAAACA--------------------CA-----------CA
i Bos_mutus.JH880303.1                                   C 0 I 1
s Bos_taurus.CM000203.6                                   18082877 20 +  45695690 GGCC-----C-TGTG--A---TAAACA--------------------CA-----------CA
i Bos_taurus.CM000203.6                                  C 0 I 1
s Bubalus_bubalis.KI419123.1                               2818366 20 +   4408762 GGCC-----C-TGTG--A---TAAACA--------------------CA-----------CA
i Bubalus_bubalis.KI419123.1                             C 0 I 1
s Camelus_bactrianus.KN276810.1                            9998817 20 -  17673402 GGCC-----C-TGTG--A---TAAACA--------------------CA-----------CC
i Camelus_bactrianus.KN276810.1                          C 0 I 1
s Camelus_dromedarius.KN272107.1                           2331281 20 -   7040546 GGCC-----C-TGTG--A---TAAACA--------------------CA-----------CC
i Camelus_dromedarius.KN272107.1                         C 0 I 1
s Camelus_ferus.KB017975.1                                  399557 20 -   1652518 GGCC-----C-TGTG--A---TAAACA--------------------CA-----------CC
i Camelus_ferus.KB017975.1                               C 0 I 1
s CanFam4.chr16                                           17795686 20 -  60362399 GGCC-----C-TGTG--A---TGAGCA--------------------CA-----------CC
i CanFam4.chr16                                          I 3 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181743 20 -    185531 GGCC-----C-TGTG--A---TGAGCA--------------------CA-----------CC
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 3 I 1
s Canis_lupus_dingo.QKWQ01000480.1                         9031130 20 -   9314153 GGCC-----C-TGTG--A---TGAGCA--------------------CA-----------CC
i Canis_lupus_dingo.QKWQ01000480.1                       I 3 I 1
s Canis_lupus_familiaris.chr16                            17955394 20 -  59632846 GGCC-----C-TGTG--A---TGAGCA--------------------CA-----------CC
i Canis_lupus_familiaris.chr16                           I 3 I 1
s Canis_lupus_orion.HG994398.1                            18496695 20 +  63665305 GGCC-----T-TGTG--A---TGAGCA--------------------CA-----------CC
i Canis_lupus_orion.HG994398.1                           I 3 I 1
s Capra_aegagrus.CM003241.1                               18829191 20 +  46296322 GTCC-----C-TGTG--G---CAGACA--------------------CA-----------CA
i Capra_aegagrus.CM003241.1                              C 0 I 1
s Capra_hircus.CM004588.1                                 18059911 20 -  44709034 GTCC-----C-TGTG--G---CAGACA--------------------CA-----------CA
i Capra_hircus.CM004588.1                                C 0 I 1
s Carlito_syrichta.NW_007259797.1                           140952 22 -    496798 c-tggG-C-T-TGTG--A---TAAGTG--------------------CA-----------CT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2792 20 -     11696 TGGC-----C-TGTG--A---TAAACA--------------------CA-----------CC
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 1
s Castor_canadensis.CasCan_scaffold_2074                    133561 19 +    179628 G-TC-----C-TAAG--G---TAAGCA--------------------CA-----------GC
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 1
s Catagonus_wagneri.CatWag_scaffold_2839                     89126 18 +    217609 --CC-----C-TGTG--A---TACACA--------------------CA-----------CC
i Catagonus_wagneri.CatWag_scaffold_2839                 I 1 I 1
s Cavia_aperea.AVPZ01000300.1                             18347380 19 -  23392119 G-TC-----C-TGAG--A---TAAACA--------------------CA-----------CC
i Cavia_aperea.AVPZ01000300.1                            C 0 I 1
s Cavia_porcellus.DS562891.1                              18359640 19 -  23407841 G-TC-----C-TGAG--A---TAAACA--------------------CA-----------CC
i Cavia_porcellus.DS562891.1                             C 0 I 1
s Cavia_tschudii.CavTsc_scaffold_8919                        98515 19 +    143979 G-TC-----C-TGAG--A---TAAACA--------------------CA-----------CT
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 I 1
s Cephalopachus_bancanus.k141_2037105                         4868 22 -      8605 C-TG-G-GCT-TGTG--A---TAAGTG--------------------CA-----------CT
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227790 20 +  27778364 GGCG-----C-TGTG--A---TAAGAA--------------------CA-----------CC
i Ceratotherium_simum.JH767749.1                         C 0 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2508 20 -      3715 GGCG-----C-TGTG--A---TAAGAA--------------------CA-----------CC
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 I 1
s Cercocebus_atys.KQ010504.1                               4470201 19 +   4669795 G-TG-----T-GGTG--G---TAAGCA--------------------CA-----------CC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8750 19 -     19203 G-TG-----T-GATG--G---TAAGCA--------------------CA-----------CC
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3169 19 +      8260 G-TG-----T-GATG--G---TAAGCA--------------------CA-----------CC
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3399 19 +     27781 G-TG-----T-GGTG--G---TAAGCA--------------------CA-----------CC
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3545 19 -     20310 G-TG-----T-TGTG--G---TAAGCA--------------------CA-----------CC
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6529 19 +     29689 G-TG-----T-TGTG--G---TAAGCA--------------------CA-----------CC
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             882 19 +      9989 G-TG-----T-TGTG--G---TAAGCA--------------------CA-----------CC
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9217 19 -     27936 G-TG-----T-TGTG--G---TAAGCA--------------------CA-----------CC
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9236 19 -     11289 G-TG-----T-TGTG--G---TAAGCA--------------------CA-----------CC
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811612 19 +  39242232 G-TG-----T-TGTG--G---TAAGCA--------------------CA-----------CC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217303 19 -  21565898 G-TG-----T-TGTG--G---TAAGCA--------------------CA-----------CC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34423 19 -     53127 G-TG-----T-TGTG--G---TAAGCA--------------------CA-----------CC
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1715 19 +      7159 G-TG-----T-TGTG--G---TAAGCA--------------------CA-----------CC
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9228 19 -     27947 G-TG-----T-TGTG--G---TAAGCA--------------------CA-----------CC
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9204 19 +     17596 G-TG-----T-TGTG--G---TAAGCA--------------------CA-----------CC
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39698 19 -     41420 G-TG-----T-TGTG--G---TAAGCA--------------------CA-----------CC
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4739  9 -      6351 AGCC-----C-TGCG-----------------------------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16642 20 -     52598 G-TC-----T-TAGG--A---CAAGCA--------------------CA-----C-----CT
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           11991 20 +     57038 G-TC-----T-TAGG--A---CAAGCA--------------------CA-----C-----CT
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1248412 19 +   2543920 A-TT-----C-TCAG--A---TAAACA--------------------TA-----------CC
i Chinchilla_lanigera.JH722012.1                         C 0 I 1
s Chlorocebus_aethiops.ctg25                              18423167 19 -  18827391 G-TG-----T-TGTG--G---TAAGCA--------------------CA-----------CC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9610 19 -     50209 G-TG-----T-TGTG--G---TAAGCA--------------------CA-----------CC
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416615 19 + 135778131 G-TG-----T-TGTG--G---TAAGCA--------------------CA-----------CC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15070 20 +     19366 GGCC-----C-TGTG--A---TAAGTA--------------------AC-----------CC
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 I 1
s Choloepus_hoffmanni.KN194906.1                            170169 20 +    839153 GGCC-----C-TGTG--A---TAAGTA--------------------AC-----------CC
i Choloepus_hoffmanni.KN194906.1                         C 0 I 1
s Chrysochloris_asiatica.ChrAsi_scaffold_172426               9167 35 -     10935 ggct-----c-tgta--a---t--gttgttgttgttatgtgctgtgga--------------
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          C 0 I 487
s Colobus_angolensis.KN981557.1                            1905135 28 +   2368649 C-TG-----T-TGTG--G---TAAGCA-----------CGGTAAGCGCA-----------CC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944753 28 + 200372422 C-TG-----T-TGTG--G---TAAGCA-----------CGGTAAGCGCA-----------CC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31647 28 +     84244 G-TG-----T-TGTG--G---TAAGCA-----------CGGTAAGCGCA-----------CC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545899 20 -  53390261 GAAC-----T-TGCA--A---AAAGCA--------------------TG-----------CA
i Condylura_cristata.JH655891.1                          I 2 I 1
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10410 21 -     20389 TTAC---C-C-TATA--A---GAAGCA--------------------CA-----------CC
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 1
s Crocidura_indochinensis.CroInd_scaffold_287352               313 10 +      4208 ---C-----T-TGTC--A---TTA--------------------------------------
i Crocidura_indochinensis.CroInd_scaffold_287352         I 2 I 10
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24153 19 -     87169 GGCC-----C-T-TG--A---TGAGCA--------------------CA-----------CC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 3 I 1
s Cuniculus_paca.CunPac_flattened_line_231100                 2764 19 +      5455 G-TC-----C-TGAG--A---TAAACG--------------------CA-----------CC
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 I 1
s Dasyprocta_punctata.DasPun_flattened_line_206793            1147 19 +      3576 G-TC-----C-TGAG--A---TAAACA--------------------CA-----------CC
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 I 1
s Dasypus_novemcinctus.JH564415.1                            60983 20 +   2246927 GGTT-----C-AGTG--A---TAAGTA--------------------AA-----------CC
i Dasypus_novemcinctus.JH564415.1                        C 0 I 1
s Daubentonia_madagascariensis.ctg71                      12532809 19 -  12879189 G-TC-----T-TAGG--A---TAAGCA--------------------CA-----------CT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811094 20 +  35494412 GGCC-----T-TGTA--A---TAAACA--------------------CA-----------CA
i Delphinapterus_leucas.KZ290073.1                       C 0 I 1
s Desmodus_rotundus.KZ672289.1                             8627823 20 +  20541912 TGGC-----C-TGTG--A---TAAACA--------------------TA-----------CC
i Desmodus_rotundus.KZ672289.1                           C 0 I 1
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669323 20 +   1390856 GGCG-----C-TGTG--A---GAAGAA--------------------CA-----------CC
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 1
s Diceros_bicornis.DicBicMic_scaffold_5955                    2398 20 +    198055 GGCG-----C-TGTG--A---TAAGAA--------------------CA-----------CC
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 1
s Dinomys_branickii.DinBra_scaffold_21862                    34205  5 +     67921 G-TT-----C-T--------------------------------------------------
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18895720 19 +  37912305 G-TC-----C-TGCA--A---TAAACA--------------------TA-----------CC
i Dipodomys_ordii.KN672350.1                             C 0 I 1
s Dipodomys_stephensi.DipSte_scaffold_75855                  11930 19 +     14536 G-TC-----C-TGCA--A---TAAACA--------------------TA-----------CC
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 I 1
s Dolichotis_patagonum.DolPat_scaffold_30833                 31405 18 -     42551 G-TC-----C-TGAG--A---TA-ACA--------------------CA-----------CC
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 I 1
s Eidolon_helvum.KE759718.1                                   7329 21 +     11740 TGGC---C-C-TATA--A---TAAGCA--------------------TA-----------CC
i Eidolon_helvum.KE759718.1                              C 0 I 1
s Elaphurus_davidianus.JRFZ01104969.1                       310195 20 +    607251 GGCC-----C-TGTG--A---TAAACA--------------------CG-----------CC
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 1
s Elephantulus_edwardii.JH947257.1                         1088920 18 +  10337057 GACT-----C---TT--A---GAAGCA--------------------AG-----------CC
i Elephantulus_edwardii.JH947257.1                       C 0 I 1
s Enhydra_lutris.KZ291758.1                               16325684 20 -  41312741 GGCC-----C-TGGG--A---TGAACA--------------------CA-----------CC
i Enhydra_lutris.KZ291758.1                              I 3 I 1
s Eptesicus_fuscus.JH977646.1                              2143980 20 -  14770903 TGGC-----C-TATG--A---TAGATA--------------------CA-----------CC
i Eptesicus_fuscus.JH977646.1                            C 0 I 1
s Equus_asinus.JREZ01000139.1                              1279665 20 +   4378816 GGCC-----C-TGTG--A---TAAGAA--------------------CA-----------CC
i Equus_asinus.JREZ01000139.1                            C 0 I 1
s Equus_caballus.CM000403.2                               18527486 20 -  39960074 GGCC-----C-TGTG--A---TAAGAA--------------------CA-----------CC
i Equus_caballus.CM000403.2                              C 0 I 1
s Equus_przewalskii.KK951119.1                               29501 20 +    498745 GGCC-----C-TGTG--A---TAAGAA--------------------CA-----------CC
i Equus_przewalskii.KK951119.1                           C 0 I 1
s Erinaceus_europaeus.JH835339.1                           3325264 10 -   7059049 ---A-----T-TGTT--C---CTA--------------------------------------
i Erinaceus_europaeus.JH835339.1                         C 0 I 2
s Erythrocebus_patas.Contig38                             21199846 19 -  21539334 G-TG-----T-TGTA--G---TAAGCA--------------------CA-----------CC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10770 20 +    133382 GGCC-----T-TGTA--A---TAAACA--------------------CA-----------CC
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 1
s Eubalaena_japonica.EubJap_flattened_line_31514             24707 20 -     44125 GGCG-----T-TGTA--A---TAAACA--------------------CA-----------CC
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 I 1
s Felis_catus.AANG03299807.1                                   329 20 -       507 GGCC-----C-TGTG--A---TGAGCA--------------------CA-----------CC
i Felis_catus.AANG03299807.1                             I 3 I 1
s Felis_catus_fca126.CM031415.1                           20191907 20 + 205367284 GGCC-----C-TGTG--A---TGAGCA--------------------CA-----------CC
i Felis_catus_fca126.CM031415.1                          I 3 I 1
s Felis_nigripes.FelNig_flattened_line_20823                  5432 20 -     36744 GGCC-----C-TGTG--A---TGAGCA--------------------CA-----------CC
i Felis_nigripes.FelNig_flattened_line_20823             I 3 I 1
s Fukomys_damarensis.KN121974.1                             848414 19 +   3816255 G-TC-----C-TGAG--G---TAAACA--------------------CA-----------CC
i Fukomys_damarensis.KN121974.1                          I 2 I 1
s Galagoides_demidoff.k141_31856                              3113 18 -      3432 a-cc-----tgtggg--a---tacagc--------------------aa-------------
i Galagoides_demidoff.k141_31856                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25378 19 +     26054 G-TC-----C-TGAG--A---TGAGCA--------------------TA-----------CC
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 I 1
s Glis_glis.GliGli_scaffold_19807                            30269 19 +     49224 G-TC-----C-TGTG--A---TAAACA--------------------TA-----------CC
i Glis_glis.GliGli_scaffold_19807                        C 0 I 1
s Gorilla_beringei.k141_3596273                              10005 15 -     32273 A-AG-----C-ACAG--G---TAAGCA-----------------------------------
i Gorilla_beringei.k141_3596273                          C 0 I 474
s Gorilla_gorilla.LT578341.1                             186332158 15 + 186649187 a-ag-----c-acag--g---taagca-----------------------------------
i Gorilla_gorilla.LT578341.1                             C 0 I 471
s Graphiurus_murinus.GraMur_scaffold_10447                   29998 18 +     78134 G-TC-----T-TGTG--A---TAAATA--------------------CA-----------G-
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 1
s Helogale_parvula.HelPar_flattened_line_2585               238069 20 +    327341 GGCC-----C-TACA--A---TGAGCA--------------------CA-----------CC
i Helogale_parvula.HelPar_flattened_line_2585            I 3 I 1
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17395 20 +     36099 GTCC-----C-TGTG--A---TAAACA--------------------CA-----------CA
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 I 1
s Heterocephalus_glaber.JH602082.1                        20659293 19 +  22651954 G-TC-----C-TGAG--A---TAAACA--------------------CA-----------CC
i Heterocephalus_glaber.JH602082.1                       C 0 I 1
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 155 20 +       961 GCCT-----G-TGTC--A---ACAGTA--------------------AG-----------CC
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 I 1
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111950 20 +    128679 GGCC-----C-TGTG--A---TAAACA--------------------CA-----------CC
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 I 1
s Hipposideros_armiger.JXIK01000431.1                       108286 23 +   1711038 TGGC---C-C-TATATGA---CAAGCA--------------------CA-----------CC
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 1
s Hipposideros_galeritus.HipGal_scaffold_29171               39727 23 +     43066 TGGC---C-C-TATATGA---CAAGCA--------------------CA-----------CT
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 I 1
s Hoolock_leuconedys.ctg274                                    429174 17 +    630532 G-TG-----T-TGTG--G---TAAGCA--------------------GG-------------
i Hoolock_leuconedys.ctg274                                 C 0 I 8
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40534 20 +     55795 GGTC-----C-TGTG--A---TGAGCC--------------------TA-----------CC
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 3 I 1
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19762 19 -    143317 A-TC-----C-TGAG--A---TAAACA--------------------CA-----------CC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 1
s Hylobates_agilis.k141_307679                               12092 17 -     15490 G-TG-----T-TGTG--G---TAAGCA--------------------CG-------------
i Hylobates_agilis.k141_307679                           C 0 I 208
s Hylobates_klossii.k141_282416                              54097 17 +     67168 G-TG-----T-TGTG--G---TAAGCA--------------------CG-------------
i Hylobates_klossii.k141_282416                          C 0 I 208
s Hylobates_pileatus_b.LG02                                     189537544 12 - 191637585 G-TG-----T-TGTG--G---TAA--------------------------------------
i Hylobates_pileatus_b.LG02                                     C 0 I 213
s Hylobates_pileatus_a.tarseq_633                            3330642 17 -  11177569 G-TG-----T-TGTG--G---TAAGCA--------------------CG-------------
i Hylobates_pileatus_a.tarseq_633                          C 0 I 208
s Hystrix_cristata.HysCri_scaffold_5660                      80836 19 +    135385 G-TC-----C-TGAG--A---TAAAAA--------------------CA-----------CC
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 1
s Ictidomys_tridecemlineatus.JH393364.1                    7514503 19 -   7955117 G-TC-----C-TGTG--A---TAAACA--------------------CA-----------CC
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 1
s Indri_indri.k141_3655594                                   18080 20 +     31101 G-TC-----T-TAGG--A---TAAGCA--------------------CA-----C-----CT
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22311 20 +     23964 GGCC-----T-TGTA--A---TAAACA--------------------CA-----------CA
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 I 1
s Jaculus_jaculus.JH725527.1                               8271280 18 -   9596543 G-TA-----C-TA-G--A---TAAATA--------------------CA-----------CA
i Jaculus_jaculus.JH725527.1                             C 0 I 5
s Kogia_breviceps.KogBre_flattened_line_192630                1578 20 -      3359 GGCC-----T-TGTA--A---TAAACA--------------------CA-----------CC
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 I 1
s Lasiurus_borealis.LasBor_scaffold_50988                    11845 20 +     29960 TGGC-----C-TATG--A---TAAACA--------------------CA-----------CC
i Lasiurus_borealis.LasBor_scaffold_50988                I 878 I 16
s Lepilemur_ankaranensis.k141_596936                          6714 20 -     23766 G-TC-----T-GGGG--A---TAAGCA--------------------CA-----C-----CT
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24661 20 +     45836 G-TC-----T-GGGG--A---TAAGCA--------------------CA-----C-----CT
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31572 20 -     32627 G-TC-----T-TGGG--A---TAAGCA--------------------CA-----C-----AT
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      22716 20 +     54090 G-TC-----T-TGGG--A---TAAGCA--------------------CA-----C-----CT
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3036017 20 +   3914936 GGCC-----C-TGGG--A---TGAACA--------------------CA-----------CC
i Leptonychotes_weddellii.KB714746.1                     I 3 I 1
s Lipotes_vexillifer.KE559953.1                             267392 20 -    662738 GGCC-----T-TGTA--A---TAAATA--------------------CA-----------CA
i Lipotes_vexillifer.KE559953.1                          C 0 I 1
s Lophocebus_aterrimus.ctg367                              1431370 20 +   1826925 G-TG-G---T-GGTG--G---TGAGCG--------------------CA-----------CC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             626  7 +     11245 -------------------------TC--------------------GA-----C-----CC
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999461  7 +   6120653 -------------------------TC--------------------GA-----C-----CC
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214428 20 -  43346337 GGCT-----G-TGTG--A---TATGTA--------------------AG-----------TC
i Loxodonta_africana.GL010049.1                          C 0 I 1
s Lycaon_pictus.CM007581.1                                17951634 20 -  59628241 GGCC-----C-TGTG--A---TGAGCA--------------------CA-----------CC
i Lycaon_pictus.CM007581.1                               I 3 I 1
s Macaca_arctoides.k141_2326796                               1556 19 +     40492 G-TG-----T-GGTG--G---TAAGCA--------------------CA-----------CC
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670816 19 +  60120075 G-TG-----T-GGTG--G---TAAGCA--------------------CA-----------CC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7314 19 -     26193 G-TG-----T-GGTG--G---TAAGCA--------------------CA-----------CC
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75108 19 -    114318 G-TG-----T-GGTG--G---TAAGCA--------------------CA-----------CC
i Macaca_fascicularis.k141_814140                        I 4 C 0
s Macaca_fuscata.k119_255327                                   827 19 -     23192 G-TG-----T-GGTG--G---TAAGCA--------------------CA-----------CC
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10276 23 -     29190 G-TGTGTG-T-GGTG--G---TAAGCA--------------------CA-----------CC
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18847 19 +     37952 G-TG-----T-GGTG--G---TAAGCA--------------------CA-----------CC
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833935 19 + 187317192 G-TG-----T-GGTG--G---TAAGCA--------------------CA-----------CC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452493 22 -  25927173 G-TGTG-G-T-GGTG--G---TAAGCA--------------------CA-----------CC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74696 19 +     89720 G-TG-----T-GGTG--G---TAAGCA--------------------CA-----------CC
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1693 19 +     20474 G-TG-----T-GGTG--G---TAAGCA--------------------CA-----------CC
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1503 10 -     14993 ---------------------TAAGCA--------------------CA-----------CC
i Macaca_siberu.k141_635500                              I 9 C 0
s Macaca_silenus.Contig273                                  324363 23 -    668171 G-TGTGTG-T-GGTG--G---TAAGCA--------------------CA-----------CC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15636 19 -     15935 G-TG-----T-GGTG--G---TAAGCA--------------------CA-----------CC
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20433 19 -     45290 G-TG-----T-GGTG--G---TAAGCA--------------------CA-----------CC
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87476 21 +     94391 TGGC---C-C-TATA--A---TAAGCA--------------------TC-----------CC
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 1
s Mandrillus_leucophaeus.scaffold280                      23931988 19 -  24302211 G-TG-----T-GGTG--G---TAAGCA--------------------CA-----------CC
i Mandrillus_leucophaeus.scaffold280                     I 2 C 0
s Mandrillus_sphinx.Contig270                               346166 19 +    752769 G-TG-----T-GGTG--G---TAAGCA--------------------CA-----------CC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15522 20 +    737560 GGCC-----C-TATT--T---TAAACA--------------------TA-----------CC
i Manis_javanica.JSZB01003497.1                          I 3 I 1
s Manis_pentadactyla.KN006162.1                              46911 20 -    317179 GGCC-----C-TATT--T---TAAGCA--------------------TA-----------CC
i Manis_pentadactyla.KN006162.1                          I 3 I 1
s Marmota_marmota.CZRN01000018.1                          33097353 19 -  40650429 G-TC-----C-TATG--A---TAAACA--------------------CA-----------CC
i Marmota_marmota.CZRN01000018.1                         C 0 I 1
s Megaderma_lyra.MegLyr_scaffold_4542                         6708 21 -    207569 TGGCT----C-TATG--A---TAAGCA--------------------TA-----------CC
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 1
s Mellivora_capensis.MelCap_flattened_line_69365              6149 19 +     13704 GGCC-----C-TGGG--A---TGAA-A--------------------CA-----------CC
i Mellivora_capensis.MelCap_flattened_line_69365         I 3 I 1
s Mesoplodon_bidens.MesBid_scaffold_108144                    2979 20 +     10310 GGCC-----T-TGTA--A---TAAACA--------------------CA-----------CC
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 I 1
s Microcebus_murinus.CM007674.1                           18283240 20 -  93316391 G-TC-----T-TAGG--A---CAAGCA--------------------CA-----C-----CT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    15402 16 -    145209 GGCT-----C-TGTG--T---TAGGTT-----------------------------------
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 9
s Micronycteris_hirsuta.MicHir_scaffold_52381                13334 20 -     19307 TGGC-----C-TGTG--A---TAAACA--------------------CA-----------CC
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 1
s Miniopterus_natalensis.LDJU01000034.1                    1849008 20 +   8254450 TGAC-----C-TATG--A---CAAACA--------------------CA-----------CC
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 1
s Miniopterus_schreibersii.MinSch_scaffold_18080             32884 20 +     64694 TGAC-----C-TATG--A---TAAACA--------------------CA-----------CC
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 1
s Miopithecus_ogouensis.k141_534055                           3723 19 -     28506 G-TA-----T-TGTG--G---TAAGCA--------------------CA-----------CC
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62347 20 -     63350 GGCC-----C-TGGG--A---TGAACA--------------------CA-----------CC
i Mirounga_angustirostris.MirAng_flattened_line_22144    I 3 I 1
s Mirza_zaza.k141_952172                                      4595 20 -     37649 G-TC-----T-CAGG--A---CAAGCC--------------------CA-----C-----CT
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26484 20 -    437263 GGCC-----T-TGTA--A---TAAACA--------------------CA-----------CA
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 1
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137740 20 -    366855 TGGC-----C-GGTG--A---CAAACT--------------------CA-----------CC
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 1
s Moschus_moschiferus.MosMos_scaffold_61429                  27335 20 -     27816 GGCT-----C-TGTG--A---TAAACA--------------------CG-----------CA
i Moschus_moschiferus.MosMos_scaffold_61429              C 0 I 1
s Mungos_mungo.MunMun_flattened_line_23663                   31270 20 +     37127 GGCC-----C-TATA--A---TGAGCA--------------------CA-----------CC
i Mungos_mungo.MunMun_flattened_line_23663               I 3 I 1
s Murina_feae.MurFea_scaffold_85699                           5043 18 +     14753 TGGC-----C-TATG--A---TAAGTA--------------------CA-------------
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2262 19 +     14296 G-TC-----C-TGTG--A---TAAACG--------------------TA-----------CC
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 1
s Mustela_putorius.JH418006.1                               297579 20 -  14710649 GGCT-----C-TGGG--A---TGAACA--------------------CA-----------CC
i Mustela_putorius.JH418006.1                            I 3 I 1
s Myotis_brandtii.KE162005.1                                278215 20 -  10118263 TGGC-----C-TATG--A---TAAATA--------------------CA-----------CC
i Myotis_brandtii.KE162005.1                             C 0 I 1
s Myotis_davidii.KB100139.1                                1585772 20 -   6019432 TGGC-----C-TATG--A---TAAATA--------------------CA-----------CC
i Myotis_davidii.KB100139.1                              C 0 I 1
s Myotis_lucifugus.GL429869.1                              3901981 20 -   4330536 TGGC-----C-TATG--A---TAAATA--------------------CA-----------CC
i Myotis_lucifugus.GL429869.1                            C 0 I 1
s Myotis_myotis.MyoMyo_scaffold_28916                        32540 20 +     33610 TGGC-----C-TATG--A---TAAATA--------------------CA-----------CC
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 I 1
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186021 20 +    196477 GGCC-----C-TGTG--A---TAAGTA--------------------AG-----------TC
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 I 1
s Nannospalax_galili.KL204047.1                            2025433 15 -   3037898 G-TC-----C-TA-G--A---TAA-CA--------------------CA-------------
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                                9736 19 +     21681 G-TG-----T-TGTC--G---TAAGCA--------------------CA-----------CC
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865440 20 +   7148211 GGCC-----T-TGTA--A---TAAACA--------------------CA-----------CA
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 1
s Noctilio_leporinus.NocLep_scaffold_251                    756305 20 +    783361 TAGC-----C-TGTG--A---TAAGCA--------------------CA-----------CC
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 1
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145895 20 -   9404916 GGCC-----C-TGTG--A---TGAGCA--------------------CA-----------CC
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 3 I 1
s Nycticebus_bengalensis.LG01                            102574430  7 - 196305487 -------------------------TC--------------------GA-----C-----CC
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2116  7 +      8486 -------------------------TC--------------------GA-----C-----CC
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744857  7 + 199412804 -------------------------TC--------------------GA-----C-----CC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355678 18 +   3988456 --TT-----T-TGAG--A---TAAACG--------------------TG-----------TA
i Ochotona_princeps.JH802162.1                           I 172 I 1
s Odobenus_rosmarus.KB229312.1                              500636 20 -   2017862 GGCC-----C-TGGG--A---TGAACA--------------------AA-----------CC
i Odobenus_rosmarus.KB229312.1                           I 3 I 1
s Odocoileus_virginianus.KZ100018.1                         144568 20 +    630418 GGCC-----C-TGTG--A---TAAACA--------------------CA-----------CC
i Odocoileus_virginianus.KZ100018.1                      C 0 I 1
s Orcinus_orca.KB316932.1                                  2781355 20 -  10937097 GGCC-----T-TGTA--A---TAAACA--------------------CA-----------CA
i Orcinus_orca.KB316932.1                                C 0 I 1
s Orycteropus_afer.OryAfe_flattened_line_144387               6753 20 -     18566 GGCT-----G-TGTG--A---TAAGTA--------------------AG-----------CC
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 I 1
s Otocyon_megalotis.JAEUCK010005147.1                       458649 20 -    559221 GGCC-----C-TGTG--A---TGAGCA--------------------CA-----------CC
i Otocyon_megalotis.JAEUCK010005147.1                    I 3 I 1
s Ovis_aries.CM001607.2                                   17584926 20 +  44047080 GTCC-----C-TGTG--A---TAAACA--------------------CA-----------CA
i Ovis_aries.CM001607.2                                  C 0 I 1
s Ovis_canadensis.OviCan_scaffold_2572                      173347 20 -    191736 GTCC-----C-TGTG--A---TAAACA--------------------CA-----------CA
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 I 1
s Pan_paniscus.KQ411613.1                                    36119 17 +     80009 G-TG-----T-TGTG--G---TAAGCA--------------------CG-------------
i Pan_paniscus.KQ411613.1                                C 0 I 2413
s Pan_troglodytes.CM009242.2                             189137071 17 + 189151597 G-TG-----T-TGTG--G---TAAGCA--------------------TA-------------
i Pan_troglodytes.CM009242.2                             C 0 I 141
s Panthera_onca.PanOnc_flattened_line_3271                  147054 20 +    230217 GCCC-----C-TGTG--A---TGAGCA--------------------CA-----------CC
i Panthera_onca.PanOnc_flattened_line_3271               I 3 I 1
s Panthera_pardus.KV860321.1                                259763 20 +  18783137 GCCC-----C-TGTG--A---TGAGCA--------------------CA-----------CC
i Panthera_pardus.KV860321.1                             I 3 I 1
s Panthera_tigris.KE722367.1                               4716910 20 -   8748460 GCCC-----C-TGTG--A---TGAGCA--------------------CA-----------CC
i Panthera_tigris.KE722367.1                             I 3 I 1
s Pantholops_hodgsonii.KE114653.1                          1264280 20 -   2937107 GTCC-----C-TGTG--A---TAAACA--------------------CA-----------CA
i Pantholops_hodgsonii.KE114653.1                        C 0 I 1
s Papio_anubis.CM001495.2                                183437310 19 + 183742232 G-TG-----T-GGTG--G---TAAGCA--------------------CA-----------CC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1372 22 +     20448 G-TG-----T-GGTG--GTAAAAAGCA--------------------CA-----------CC
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20557994 19 +  20919399 G-TG-----T-GGTG--G---TAAGCA--------------------CA-----------CC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                    115 22 +     41871 G-TG-----T-GGTG--GTAAAAAGCA--------------------CA-----------CC
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     3404 14 +     27711 G-TG-----T-GGTG--G---TAAGC------------------------------------
i Papio_papio.k141_802527                                C 0 I 114
s Papio_ursinus.k141_3428135                                  3393 22 +      9205 G-TG-----T-GGTG--GTAAAAAGCA--------------------CA-----------CC
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8790 19 -     78924 GGC------C-TGTG--A---TGAGCA--------------------CA-----------TC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 3 I 1
s Perodicticus_ibeanus.k141_855320                            4608  6 +     13100 -------------------------CC--------------------AA-----------CC
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             2976  6 +     25941 -------------------------CC--------------------AA-----------CC
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25277 19 +     32600 G-TC-----C-TACT--A---TAAACG--------------------TA-----------CC
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 I 1
s Petromus_typicus.PetTyp_scaffold_42190                     25762 19 -     29689 G-TC-----T-TGAG--A---TAAACT--------------------CA-----------CC
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 I 6
s Phocoena_phocoena.PhoPho_flattened_line_24159               8402 20 +     63832 GGCC-----T-TGTA--A---TAAACA--------------------CA-----------CA
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 1
s Piliocolobus_badius.k141_1234363                           38252 19 +     62158 G-TG-----T-TGTA--G---TAAGCA--------------------CA-----------CC
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        32979 19 +     89929 G-GG-----T-TGTA--G---TAAGCA--------------------CA-----------CC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34395 19 +     51399 G-GG-----T-TGTA--G---TAAGCA--------------------CA-----------CC
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290616 19 -  14605196 G-GG-----T-TGTA--G---TAAGCA--------------------CA-----------CC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              354 20 +     22620 TGGT-----C-TATG--A---TAAATA--------------------CA-----------CC
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 1
s Platanista_gangetica.PlaMin_flattened_line_32310           34108 20 +     35617 GGCC-----T-TGTA--A---TAAACA--------------------CA-----------TC
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 I 1
s Pongo_abelii.CM009266.2                                189125157 17 + 189387572 G-TG-----T-TGTG--G---TAAGCA--------------------CG-------------
i Pongo_abelii.CM009266.2                                C 0 I 515
s Pongo_pygmaeus.ctg66                                     9565000 17 +   9816681 G-TG-----T-TGTG--G---TAAGCA--------------------CG-------------
i Pongo_pygmaeus.ctg66                                   C 0 I 2
s Presbytis_comata.k141_677006                               67896 19 -     81375 G-TG-----T-TGTA--G---TAAGCA--------------------CA-----------CC
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9723 19 +     10147 G-TG-----T-TGTA--G---TAAGCA--------------------CA-----------CC
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9916 20 -     22811 GCCT-----G-TGTC--A---ACAGTA--------------------AG-----------CC
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 I 1
s Propithecus_coquerelli.NW_012148875.1                     986294 20 +   2598838 G-TC-----T-TAAG--A---GAAGCA--------------------CA-----C-----CT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          24583 20 +     38485 G-TC-----T-TAAG--A---GAAGCA--------------------CA-----C-----CT
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                              744 20 +      4256 G-TC-----T-TAAG--A---GAAGCA--------------------CA-----C-----CT
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22102 20 +     35766 G-TC-----T-TAAG--A---GAAGCA--------------------CA-----C-----CT
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            285 20 -     24134 G-TC-----T-TAAG--A---GAAGCA--------------------CA-----C-----CT
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24097 20 -     67325 G-TC-----T-TAAG--A---GAAGCA--------------------CA-----C-----CT
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            342 20 -      6182 G-TC-----T-TAAG--A---GAAGCA--------------------CA-----C-----CT
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11122 20 -     21811 TGGC-----C-TATG--A---TGAACC--------------------CA-----------CT
i Pteronotus_parnellii.KE909381.1                        C 0 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36590 20 +     42204 GGCC-----C-TGGG--A---TGAACA--------------------CA-----------CC
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 3 I 1
s Pteropus_alecto.KB030862.1                              22973599 21 +  28871421 TGGC---C-C-TATA--A---TAAGCA--------------------TA-----------CC
i Pteropus_alecto.KB030862.1                             C 0 I 6
s Pteropus_vampyrus.KN534172.1                                1536 21 -      8028 TGGC---C-C-TATA--A---TAAGCA--------------------TA-----------CC
i Pteropus_vampyrus.KN534172.1                           C 0 I 6
s Puma_concolor.QAVW01001104.1                            20270221 20 -  38429054 GGCC-----C-TGTG--A---TGAGCA--------------------CA-----------CC
i Puma_concolor.QAVW01001104.1                           I 3 I 1
s Pygathrix_cinerea.k141_1153803                              9725 19 -     91421 G-TG-----T-TGTA--G---TAAGCA--------------------CA-----------CC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603859 19 +   7812017 G-TG-----T-TGTA--G---TAAGCA--------------------CA-----------CC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9698 19 -     72585 G-TG-----T-TGTA--G---TAAGCA--------------------CA-----------CC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4816 20 +     55207 GGCC-----C-TGTG--A---TAAACA--------------------CA-----------CC
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 1
s Rhinolophus_sinicus.LVEH01000134.1                        366836 17 -   3329780 -----------TATACAG---TAAGCA--------------------CA-----------CC
i Rhinolophus_sinicus.LVEH01000134.1                     I 5 I 1
s Rhinopithecus_bieti.k119_217274                             1111 19 -     11128 G-TG-----T-TGCA--G---TAAGCA--------------------CA-----------CC
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230488 19 - 195417433 G-TG-----T-TGCA--G---TAAGCA--------------------CA-----------CC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7666196 19 +   7961872 G-TG-----T-TGCA--G---TAAGCA--------------------CA-----------CC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84584 21 -     96226 TGAC---A-C-TATT--A---TAAGCA--------------------TA-----------CC
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 1
s Saiga_tatarica.SaiTat_scaffold_373180                       3469 20 +      4321 GGCC-----C-TGTG--A---CAAACA--------------------CA-----------CA
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 I 1
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151322 14 -    313613 GGAC-----T-TGTG--A---TAAG-------------------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 2 C 0
s Semnopithecus_entellus.k141_11662                          14240 19 -     19888 G-TG-----T-TGCA--G---TAAGCA--------------------CA-----------CC
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21445 19 +     39453 G-TG-----T-TGCA--G---TAAGCA--------------------CA-----------CC
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            1969 19 +     27826 G-TG-----T-TGCA--G---TAAGCA--------------------CA-----------CC
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1491 19 -     19483 G-TG-----T-TGCA--G---TAAGCA--------------------CA-----------CC
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1553 19 +      7198 G-TG-----T-TGCA--G---TAAGCA--------------------CA-----------CC
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9813 19 +     15514 G-TG-----T-TGCA--G---TAAGCA--------------------CA-----------CC
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187605 20 -    191337 GATC-----C-TATG--A---AAAATG--------------------CC-----------TG
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 I 1
s Sorex_araneus.JH798187.1                                13646960 10 -  18376816 ---C-----T-TGAC--A---TTG--------------------------------------
i Sorex_araneus.JH798187.1                               C 0 I 2
s Spermophilus_dauricus.KZ294078.1                         1948145 19 -   3870691 G-TC-----C-TGTG--A---TAAACA--------------------CA-----------CC
i Spermophilus_dauricus.KZ294078.1                       C 0 I 1
s Spilogale_gracilis.SpiGra_flattened_line_13525             27133 20 +     97271 GGCC-----C-TGGG--A---TGAACA--------------------TA-----------CC
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 3 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14139 20 -    196729 GGCA-----C-TATA--A---TGAGCA--------------------CA-----------CC
i Suricata_suricatta.SurSur_flattened_line_6629          I 3 I 1
s Sus_scrofa.CM000828.4                                   62882389 18 -  69701581 --CC-----C-TGTG--A---TAAATA--------------------CA-----------CC
i Sus_scrofa.CM000828.4                                  I 1 I 1
s Symphalangus_syndactylus.tarseq_199                      1087789 17 -   1523678 G-TG-----T-TGTG--G---TAAGCA--------------------GG-------------
i Symphalangus_syndactylus.tarseq_199                    C 0 I 209
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6738 20 +     41958 TGAC-----C-TGTG--A---TGTAGA--------------------CG-----------CC
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 6
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69383 20 +    116680 GGCC-----C-TGTG--A---TAAGTA--------------------AG-----------TC
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 I 1
s Tapirus_indicus.TapInd_scaffold_9301                      115120 20 -    156842 CACT-----C-TGCA--A---TAAGAA--------------------CG-----------CC
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 1
s Tapirus_terrestris.TapTer_scaffold_755                    383575 20 +    539355 CGCT-----C-TGCA--A---TAAGAA--------------------CA-----------CC
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 1
s Tarsius_lariang.k141_2201908                               10567 22 +     70052 C-CG-G-GCT-TGTG--A---TAAGTG--------------------CA-----------CT
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               14872 22 +     25099 C-CG-G-GCT-TGTG--A---TAAGTG--------------------CA-----------CT
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422819 19 + 186847797 G-TG-----T-GGTG--G---TTAGCA--------------------CA-----------CC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103103 19 +    114563 C-TC-----C-TGAG--A---TAGACT--------------------CA-----------TC
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 6
s Tolypeutes_matacus.TolMat_scaffold_228639                   1797  9 +      8208 AGCC-----C-TGTG-----------------------------------------------
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78878 20 +    610378 TGGC-----C-TGTG--A---TAAACA--------------------TA-----------CC
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 1
s Trachypithecus_auratus.k141_722599                          5550 19 -     20410 G-TG-----T-TGCA--G---TAAGCA--------------------CA-----------CC
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9742 19 +     15221 G-TG-----T-TGCA--G---TAAGCA--------------------CA-----------CC
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5650 19 +     19930 G-TG-----T-TGCA--G---TAAGCA--------------------CA-----------CC
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2077 19 -     19997 G-TG-----T-TGCA--G---TAAGCA--------------------CA-----------CC
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42196 19 -     60166 G-TG-----T-TGCA--G---TAAGCA--------------------CA-----------CC
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9668 19 -     27529 G-TG-----T-TGCA--G---TAAGCA--------------------CA-----------CC
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9608 19 -     18194 G-TG-----T-TGCA--G---TAAGCA--------------------CA-----------CC
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3344 19 -     21137 G-TG-----T-TGCA--G---TAAGCA--------------------CA-----------CC
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2046 19 -     10723 G-TG-----T-TGCA--G---TAAGCA--------------------CA-----------CC
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1199 19 +      9834 G-TG-----T-TGCA--G---TAAGCA--------------------CA-----------CC
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19517 19 +     32220 G-TG-----T-TGCA--G---TAAGCA--------------------CA-----------CC
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933614 19 +   6242583 G-TG-----T-TGCA--G---TAAGCA--------------------CA-----------CC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2859 19 +     20839 G-TG-----T-TGCA--G---TAAGCA--------------------CA-----------CC
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_124071                    815 20 -      2171 GGCT-----C-TGTG--A---TAAACA--------------------CA-----------CA
i Tragulus_javanicus.TraJav_scaffold_124071              I 236 T 2
s Tupaia_chinensis.KB320699.1                              2149506 19 +   4065304 G-TC-----C-GGTG--G---TGAACA--------------------CG-----------TC
i Tupaia_chinensis.KB320699.1                            C 0 I 1
s Tupaia_tana.TupTan_flattened_line_97126                     3125 19 -     10553 G-TC-----C-GGTG--G---TGAACA--------------------CG-----------TC
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 1
s Tursiops_truncatus.MRVK01000835.1                       15737602 20 +  33153633 GGCC-----T-TGTA--A---TAAACA--------------------CA-----------CA
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 1
s Uropsilus_gracilis.UroGra_scaffold_97021                    1822 31 -      4736 GGAC-----T-TATA--A---TAAGTA--------------------CAATGGACACACTCC
i Uropsilus_gracilis.UroGra_scaffold_97021               I 2 I 1
s Ursus_maritimus.KK499267.1                               4846833 20 -   5085361 GGCC-----C-TGGG--A---TGAACA--------------------CA-----------CC
i Ursus_maritimus.KK499267.1                             I 3 I 1
s Vicugna_pacos.KN270157.1                                 5368306 20 -   5488506 GGCC-----C-TGTG--A---TAAACA--------------------CA-----------CC
i Vicugna_pacos.KN270157.1                               C 0 I 1
s Vulpes_lagopus.VulLag_flattened_line_30954                  7310 20 -     43706 GGCC-----C-TGTG--A---TGAGCA--------------------CA-----------CC
i Vulpes_lagopus.VulLag_flattened_line_30954             I 3 I 1
s Xerus_inauris.XerIna_scaffold_48378                        19640 19 -     24430 G-TC-----C-TGTG--A---TAAACA--------------------CA-----------CC
i Xerus_inauris.XerIna_scaffold_48378                    C 0 I 1
s Zalophus_californianus.ZalCal_flattened_line_63728          1758 20 +      2932 GGCC-----C-TGGG--A---TGAACA--------------------AA-----------CC
i Zalophus_californianus.ZalCal_flattened_line_63728     I 3 I 1
s Zapus_hudsonius.ZapHud_scaffold_11398                       9914 18 +     63895 G-TG-----C-TA-G--A---TAAACA--------------------CA-----------CA
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 5
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11294 20 +     12536 GGCC-----T-TGTA--A---TAAACA--------------------CA-----------CC
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 I 1
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                        776 16 +     62944 TG---------------------------CT---------------------------A-T-G-TT---GGAG-GA-A
s Acinonyx_jubatus.LLWD01001279.1                           823228 16 -   1699592 AC----------------------------T---------------------------A-CAA-TT---GTAA-GA-A
i Acinonyx_jubatus.LLWD01001279.1                        I 1 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506925 10 -  29979442 --------------------------------------------------------------G-TT---AGAG-GA-A
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 6 C 0
s Ailurus_fulgens.LNAC01001112.1                             75143 16 -    347723 AC----------------------------T---------------------------A-CAA-TT---AGAG-GA-T
i Ailurus_fulgens.LNAC01001112.1                         I 1 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64923 15 -     89534 AG----------------------------A---------------------------A-T-A-TT---AGAG-GA-A
i Allactaga_bullata.AllBul_scaffold_9566                 I 5 I 8
s Allenopithecus_nigroviridis.k141_3361533                    9249 16 -     52922 TG---------------------------CT---------------------------A-T-G-TT---AGAG-GA-A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9176 16 -     28001 TG---------------------------CT---------------------------A-T-G-TT---AGAG-GA-A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9302 16 -      9772 TG---------------------------CT---------------------------A-T-G-TT---AGAG-GA-A
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            459 16 -     12518 TG---------------------------CT---------------------------A-T-G-TT---AGAG-GA-A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675094 15 -   2318259 AG----------------------------T---------------------------T-C-A-TT---AGGG-GA-A
i Ammotragus_lervia.NIVO01071767.1                       I 1 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183043 15 +    412891 AC----------------------------T---------------------------A-C-T-CC---AGGG-GA-A
i Anoura_caudifer.AnoCau_scaffold_1412                   I 1 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97546 15 -    100397 AG----------------------------C---------------------------T-C-A-TT---AGAG-GA-A
i Antilocapra_americana.AntAmePen_scaffold_12469         I 1 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7203 15 +     20879 GG----------------------------A---------------------------A-C-A-TG---AAAG-AA-A
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 1 I 8
s Arctocebus_calabarensis.k141_288239                        14381 15 +     17124 AA----------------------------T---------------------------C-A-G-TA---AGAG-GA-A
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2395 15 +     43469 AG----------------------------T---------------------------G-C-A-TT---AGGG-GA-A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 1 C 0
s Avahi_laniger.k141_765380                                  49243 15 -     92717 GG----------------------------T---------------------------A-T-G-TT---AGAG-GA-A
i Avahi_laniger.k141_765380                              C 0 I 2
s Avahi_peyrierasi.k141_1424874                              49868 15 +     85213 GG----------------------------T---------------------------A-T-G-TT---AGAG-GA-A
i Avahi_peyrierasi.k141_1424874                          C 0 I 2
s Balaenoptera_acutorostrata.KI537508.1                   15191479 15 +  23207421 AG----------------------------T---------------------------A-C-A-TT---AGAG-GA-A
i Balaenoptera_acutorostrata.KI537508.1                  I 1 C 0
s Balaenoptera_bonaerensis.DF707048.1                         1945 15 -     18090 AG----------------------------T---------------------------A-C-A-TT---AGAG-GA-A
i Balaenoptera_bonaerensis.DF707048.1                    I 1 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26016 15 +     34529 GG----------------------------T---------------------------T-C-A-TT---AGGG-GA-A
i Beatragus_hunteri.BeaHun_scaffold_50177                I 1 C 0
s Bison_bison.KN261452.1                                    199055 15 -    288883 AG----------------------------T---------------------------T-C-A-TT---AGAG-GA-A
i Bison_bison.KN261452.1                                 I 1 C 0
s Bos_indicus.CM003047.1                                  20272260 15 +  48749331 AG----------------------------N---------------------------T-C-A-TT---AGAG-GA-A
i Bos_indicus.CM003047.1                                 I 1 C 0
s Bos_mutus.JH880303.1                                     1124820 15 -   1948126 AG----------------------------T---------------------------T-C-A-TT---AGAG-GA-A
i Bos_mutus.JH880303.1                                   I 1 C 0
s Bos_taurus.CM000203.6                                   18082898 15 +  45695690 AG----------------------------T---------------------------T-C-A-TT---AGAG-GA-A
i Bos_taurus.CM000203.6                                  I 1 C 0
s Bubalus_bubalis.KI419123.1                               2818387 15 +   4408762 AG----------------------------T---------------------------T-C-A-TT---AGAG-GA-A
i Bubalus_bubalis.KI419123.1                             I 1 C 0
s Camelus_bactrianus.KN276810.1                            9998838 15 -  17673402 AG----------------------------T---------------------------A-C-G-TT---AGAG-GA-A
i Camelus_bactrianus.KN276810.1                          I 1 C 0
s Camelus_dromedarius.KN272107.1                           2331302 15 -   7040546 AG----------------------------T---------------------------A-C-G-TT---AGAG-GA-A
i Camelus_dromedarius.KN272107.1                         I 1 C 0
s Camelus_ferus.KB017975.1                                  399578 15 -   1652518 AG----------------------------T---------------------------A-C-G-TT---AGAG-GA-A
i Camelus_ferus.KB017975.1                               I 1 C 0
s CanFam4.chr16                                           17795707 16 -  60362399 GC----------------------------T---------------------------A-CAA-TT---ATAG-GA-A
i CanFam4.chr16                                          I 1 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181764 16 -    185531 GC----------------------------T---------------------------A-CAA-TT---ATAG-GA-A
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 1 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031151 16 -   9314153 GC----------------------------T---------------------------A-CAA-TT---ATAG-GA-A
i Canis_lupus_dingo.QKWQ01000480.1                       I 1 C 0
s Canis_lupus_familiaris.chr16                            17955415 16 -  59632846 GC----------------------------T---------------------------A-CAA-TT---ATAG-GA-A
i Canis_lupus_familiaris.chr16                           I 1 C 0
s Canis_lupus_orion.HG994398.1                            18496716 16 +  63665305 GC----------------------------T---------------------------A-CAA-TT---ATAG-GA-A
i Canis_lupus_orion.HG994398.1                           I 1 C 0
s Capra_aegagrus.CM003241.1                               18829212 15 +  46296322 AG----------------------------T---------------------------T-C-A-TC---AGGG-GG-A
i Capra_aegagrus.CM003241.1                              I 1 C 0
s Capra_hircus.CM004588.1                                 18059932 15 -  44709034 AG----------------------------T---------------------------T-C-A-TC---AGGG-GG-A
i Capra_hircus.CM004588.1                                I 1 C 0
s Carlito_syrichta.NW_007259797.1                           140974 16 -    496798 GG--G-------------------------T---------------------------G-T-G-TT---AGAg-aa-a
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2813 15 -     11696 AG----------------------------T---------------------------G-C-A-CT---AGGG-GA-G
i Carollia_perspicillata.CarPer_scaffold_92756           I 1 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133581 15 +    179628 GG----------------------------C---------------------------T-C-A-TC---AGAG-GG-A
i Castor_canadensis.CasCan_scaffold_2074                 I 1 I 6
s Catagonus_wagneri.CatWag_scaffold_2839                     89145 15 +    217609 AG----------------------------T---------------------------A-C-A-CT---AGAG-GA-C
i Catagonus_wagneri.CatWag_scaffold_2839                 I 1 C 0
s Cavia_aperea.AVPZ01000300.1                             18347400 15 -  23392119 GG----------------------------T---------------------------A-C-A-TT---ACAG-GA-A
i Cavia_aperea.AVPZ01000300.1                            I 1 I 7
s Cavia_porcellus.DS562891.1                              18359660 15 -  23407841 GG----------------------------T---------------------------A-C-A-TT---ACAG-GA-A
i Cavia_porcellus.DS562891.1                             I 1 I 7
s Cavia_tschudii.CavTsc_scaffold_8919                        98535 15 +    143979 GG----------------------------T---------------------------A-C-A-TT---ACAG-GA-A
i Cavia_tschudii.CavTsc_scaffold_8919                    I 1 I 7
s Cephalopachus_bancanus.k141_2037105                         4890 16 -      8605 GG--G-------------------------T---------------------------G-T-G-TT---AGAG-AA-A
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227811 15 +  27778364 AG----------------------------T---------------------------A-C-A-TT---AGAG-GA-A
i Ceratotherium_simum.JH767749.1                         I 1 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2529 15 -      3715 AG----------------------------T---------------------------A-C-A-TT---AGAG-GA-A
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     I 1 C 0
s Cercocebus_atys.KQ010504.1                               4470220 16 +   4669795 TG---------------------------CT---------------------------A-T-G-TT---AGAG-GA-A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8769 16 -     19203 TG---------------------------CT---------------------------A-T-G-TT---AGAG-GA-A
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3188 16 +      8260 TG---------------------------CT---------------------------A-T-G-TT---AGAG-GA-A
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3418 16 +     27781 TG---------------------------CT---------------------------A-T-G-TT---AGAG-GA-A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3564 16 -     20310 TG---------------------------CT---------------------------A-T-G-TT---AGAG-GA-A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6548 16 +     29689 TG---------------------------CT---------------------------A-T-G-TT---AGAG-GA-A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             901 16 +      9989 CG---------------------------CT---------------------------A-T-G-TT---AGAA-GA-A
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9236 16 -     27936 TG---------------------------CT---------------------------A-T-G-TT---AGAG-GA-A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9255 16 -     11289 TG---------------------------CT---------------------------A-T-G-TT---AGAG-GA-A
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811631 16 +  39242232 TG---------------------------CT---------------------------A-T-G-TT---AGAG-GA-A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217322 16 -  21565898 TG---------------------------CT---------------------------A-T-G-TT---AGAG-GA-A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34442 16 -     53127 TG---------------------------CT---------------------------A-T-G-TT---AGAG-GA-A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1734 16 +      7159 TG---------------------------CT---------------------------A-T-G-TT---AGAG-GA-A
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9247 16 -     27947 TG---------------------------CT---------------------------A-T-G-TT---AGAG-GA-A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9223 16 +     17596 TG---------------------------CT---------------------------G-G-G-TT---AGAG-GA-A
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39717 16 -     41420 TG---------------------------CT---------------------------A-T-G-TT---AGAG-GA-A
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Cheirogaleus_major.k141_333249                             16662 15 -     52598 GG----------------------------T---------------------------A-T-G-TT---AGAG-GA-A
i Cheirogaleus_major.k141_333249                         C 0 I 2
s Cheirogaleus_medius.k141_1055463                           12011 15 +     57038 GG----------------------------T---------------------------A-T-G-TT---AGAG-GA-A
i Cheirogaleus_medius.k141_1055463                       C 0 I 2
s Chinchilla_lanigera.JH722012.1                           1248432 15 +   2543920 GG----------------------------T---------------------------A-A-A-AT---ACAG-GA-A
i Chinchilla_lanigera.JH722012.1                         I 1 I 7
s Chlorocebus_aethiops.ctg25                              18423186 16 -  18827391 TG---------------------------CT---------------------------A-T-G-TT---AGAG-GA-A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9629 16 -     50209 TG---------------------------CT---------------------------A-T-G-TT---AGAG-GA-A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416634 16 + 135778131 TG---------------------------CT---------------------------A-T-G-TT---AGAG-GA-A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15091 14 +     19366 GA----------------------------T---------------------------G-A-C-TA---AGG--GA-A
i Choloepus_didactylus.ChoDid_scaffold_45914             I 1 C 0
s Choloepus_hoffmanni.KN194906.1                            170190 14 +    839153 GA----------------------------T---------------------------G-A-C-TA---AGG--GA-A
i Choloepus_hoffmanni.KN194906.1                         I 1 C 0
s Colobus_angolensis.KN981557.1                            1905163 16 +   2368649 TG---------------------------CT---------------------------G-T-G-TT---AGAG-GA-A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944781 43 + 200372422 TGCTGTGTTAGAGGAACTGTACACACCTGCT---------------------------G-T-G-TT---AGAG-GA-A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31675 43 +     84244 TGCTGTGTTAGAGGAACTGTACACACCTGCT---------------------------G-T-G-TT---AGAG-GA-A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545920 15 -  53390261 AG----------------------------T---------------------------A-C-A-CT---GGAG-AA-A
i Condylura_cristata.JH655891.1                          I 1 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10432 15 -     20389 AA----------------------------T---------------------------A-T-G-TT---AGG--GAAA
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 1 C 0
s Crocidura_indochinensis.CroInd_scaffold_603213              1025  7 +      1923 TG----------------------------T---------------------------A-A-A-T-------------
i Crocidura_indochinensis.CroInd_scaffold_603213         I 12 T 7
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24173 16 -     87169 AC----------------------------T---------------------------A-AAA-TT---ATAG-CA-A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 1 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2784 15 +      5455 GC----------------------------T---------------------------A-C-A-TT---ACAG-GA-A
i Cuniculus_paca.CunPac_flattened_line_231100            I 1 I 7
s Dasyprocta_punctata.DasPun_flattened_line_206793            1167 15 +      3576 GG----------------------------T---------------------------A-C-A-TT---ACAG-GA-A
i Dasyprocta_punctata.DasPun_flattened_line_206793       I 1 I 7
s Dasypus_novemcinctus.JH564415.1                            61004 14 +   2246927 GA----------------------------T---------------------------G-A-C-TA---AGG--AA-G
i Dasypus_novemcinctus.JH564415.1                        I 1 C 0
s Daubentonia_madagascariensis.ctg71                      12532828 15 -  12879189 GG----------------------------T---------------------------A-T-G-TT---AGAG-GA-A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811115 15 +  35494412 AG----------------------------T---------------------------A-C-A-TT---AGAG-GA-A
i Delphinapterus_leucas.KZ290073.1                       I 1 C 0
s Desmodus_rotundus.KZ672289.1                             8627844 15 +  20541912 AG----------------------------T---------------------------G-C-A-CT---AGGG-GA-A
i Desmodus_rotundus.KZ672289.1                           I 1 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669344 15 +   1390856 AG----------------------------T---------------------------A-C-A-TT---AGAG-GA-A
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 1 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2419 15 +    198055 AG----------------------------T---------------------------A-C-A-TT---AGAG-GA-A
i Diceros_bicornis.DicBicMic_scaffold_5955               I 1 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34210 15 +     67921 GG----------------------------T---------------------------A-C-A-AT---ACAG-GA-A
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 7
s Dipodomys_ordii.KN672350.1                              18895740 15 +  37912305 GG----------------------------A---------------------------A-C-A-TT---Caaa-ga-a
i Dipodomys_ordii.KN672350.1                             I 1 I 8
s Dipodomys_stephensi.DipSte_scaffold_75855                  11950 15 +     14536 GG----------------------------A---------------------------A-C-A-TT---CAAA-GA-A
i Dipodomys_stephensi.DipSte_scaffold_75855              I 1 I 8
s Dolichotis_patagonum.DolPat_scaffold_30833                 31424 15 -     42551 GG----------------------------T---------------------------A-C-A-TT---ACAG-GA-A
i Dolichotis_patagonum.DolPat_scaffold_30833             I 1 I 7
s Eidolon_helvum.KE759718.1                                   7351 15 +     11740 AG----------------------------T---------------------------AAT-A-TT---AGG--GA-A
i Eidolon_helvum.KE759718.1                              I 1 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310216 15 +    607251 AG----------------------------T---------------------------T-C-A-TT---AGAG-GA-A
i Elaphurus_davidianus.JRFZ01104969.1                    I 1 C 0
s Elephantulus_edwardii.JH947257.1                         1088939 15 +  10337057 GA----------------------------G---------------------------G-C-C-TA---AAGG-GA-A
i Elephantulus_edwardii.JH947257.1                       I 1 C 0
s Enhydra_lutris.KZ291758.1                               16325705 16 -  41312741 AC----------------------------T---------------------------A-CAA-TT---AGAG-GA-A
i Enhydra_lutris.KZ291758.1                              I 1 C 0
s Eptesicus_fuscus.JH977646.1                              2144001 15 -  14770903 AG----------------------------T---------------------------A-C-A-CT---AGGT-GA-A
i Eptesicus_fuscus.JH977646.1                            I 1 C 0
s Equus_asinus.JREZ01000139.1                              1279686 15 +   4378816 AG----------------------------T---------------------------A-C-A-TT---AGAG-GA-A
i Equus_asinus.JREZ01000139.1                            I 1 C 0
s Equus_caballus.CM000403.2                               18527507 15 -  39960074 AG----------------------------T---------------------------A-C-A-TT---AGAG-GA-A
i Equus_caballus.CM000403.2                              I 1 C 0
s Equus_przewalskii.KK951119.1                               29522 15 +    498745 AG----------------------------T---------------------------A-C-A-TT---AGAG-GA-A
i Equus_przewalskii.KK951119.1                           I 1 C 0
s Erinaceus_europaeus.JH835339.1                           3325276 15 -   7059049 AG----------------------------T---------------------------A-C-A-TT---AGGG-GA-A
i Erinaceus_europaeus.JH835339.1                         I 2 C 0
s Erythrocebus_patas.Contig38                             21199865 16 -  21539334 TG---------------------------CT---------------------------A-T-G-TT---AGAG-GA-A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10791 15 +    133382 AG----------------------------T---------------------------A-C-A-TT---AGAG-GA-A
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 1 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24728 15 -     44125 AG----------------------------T---------------------------A-C-A-TT---AGAG-GA-A
i Eubalaena_japonica.EubJap_flattened_line_31514         I 1 C 0
s Felis_catus.AANG03299807.1                                   350 16 -       507 AC----------------------------T---------------------------A-CAA-TT---TTAA-GC-A
i Felis_catus.AANG03299807.1                             I 1 C 0
s Felis_catus_fca126.CM031415.1                           20191928 16 + 205367284 AC----------------------------T---------------------------A-CAA-TT---TTAA-GC-A
i Felis_catus_fca126.CM031415.1                          I 1 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  5453 16 -     36744 AC----------------------------T---------------------------A-CAA-TT---TTAA-GC-A
i Felis_nigripes.FelNig_flattened_line_20823             I 1 C 0
s Fukomys_damarensis.KN121974.1                             848434 15 +   3816255 GA----------------------------T---------------------------A-T-A-TT---AGAG-GA-A
i Fukomys_damarensis.KN121974.1                          I 1 I 7
s Galagoides_demidoff.k141_31856                              3131 18 -      3432 aa----------------------------g---------------------------c-a-g-tcctgagag-ga-a
i Galagoides_demidoff.k141_31856                         C 0 I 7
s Galeopterus_variegatus.GalVar_scaffold_56069               25398 15 +     26054 GG----------------------------T---------------------------A-C-A-TT---AGAG-AA-A
i Galeopterus_variegatus.GalVar_scaffold_56069           I 1 C 0
s Glis_glis.GliGli_scaffold_19807                            30289 15 +     49224 GC----------------------------T---------------------------T-C-A-TT---AAAG-GA-A
i Glis_glis.GliGli_scaffold_19807                        I 1 I 7
s Gorilla_beringei.k141_3596273                              10494 16 -     32273 TG---------------------------CT---------------------------A-T-A-TT---AGAG-GA-A
i Gorilla_beringei.k141_3596273                          I 474 T 140
s Gorilla_gorilla.LT578341.1                             186332644 16 + 186649187 TG---------------------------CT---------------------------A-T-A-TT---AGAG-GA-A
i Gorilla_gorilla.LT578341.1                             I 471 T 106
s Graphiurus_murinus.GraMur_scaffold_10447                   30017 15 +     78134 AC----------------------------T---------------------------A-C-A-TT---AAAG-GA-A
i Graphiurus_murinus.GraMur_scaffold_10447               I 1 I 7
s Helogale_parvula.HelPar_flattened_line_2585               238090 16 +    327341 AC----------------------------T---------------------------A-CAA-TT---ATAG-CA-A
i Helogale_parvula.HelPar_flattened_line_2585            I 1 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17416 15 +     36099 AG----------------------------T---------------------------T-C-A-TC---AGGG-GA-A
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 1 C 0
s Heterocephalus_glaber.JH602082.1                        20659313 15 +  22651954 GA----------------------------C---------------------------A-C-A-TT---AGAG-GA-A
i Heterocephalus_glaber.JH602082.1                       I 1 I 7
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 176 15 +       961 GG----------------------------T---------------------------G-C-A-TA---AGAG-GA-A
i Heterohyrax_brucei.HetBruBak_scaffold_383740           I 1 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111971 15 +    128679 AG----------------------------T---------------------------A-C-A-TT---AGAG-GA-A
i Hippopotamus_amphibius.HipAmp_scaffold_9076            I 1 I 8
s Hipposideros_armiger.JXIK01000431.1                       108310 15 +   1711038 AG----------------------------T---------------------------A-C-A-TG---AGG-AGA-A
i Hipposideros_armiger.JXIK01000431.1                    I 1 I 7
s Hipposideros_galeritus.HipGal_scaffold_29171               39751 15 +     43066 AG----------------------------T---------------------------A-C-A-TG---AGG-AGA-A
i Hipposideros_galeritus.HipGal_scaffold_29171           I 1 I 7
s Hoolock_leuconedys.ctg274                                    429199 10 +    630532 --------------------------------------------------------------G-TT---AGAG-GA-A
i Hoolock_leuconedys.ctg274                                 I 8 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40555 16 +     55795 AC----------------------------T---------------------------A-TAA-TT---ATAA-CA-A
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 1 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19782 15 -    143317 GG----------------------------T---------------------------A-C-A-TT---TCAG-GA-A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 1 I 7
s Hylobates_agilis.k141_307679                               12317 16 -     15490 TG---------------------------CT---------------------------A-T-G-TT---AGAG-GA-A
i Hylobates_agilis.k141_307679                           I 208 T 206
s Hylobates_klossii.k141_282416                              54322 16 +     67168 TG---------------------------CT---------------------------A-T-G-TT---AGAG-GA-A
i Hylobates_klossii.k141_282416                          I 208 T 206
s Hylobates_pileatus_b.LG02                                     189537769 16 - 191637585 TG---------------------------CT---------------------------A-T-G-TT---AGAG-GA-A
i Hylobates_pileatus_b.LG02                                     I 213 I 205
s Hylobates_pileatus_a.tarseq_633                            3330867 16 -  11177569 TG---------------------------CT---------------------------A-T-G-TT---AGAG-GA-A
i Hylobates_pileatus_a.tarseq_633                          I 208 T 206
s Hystrix_cristata.HysCri_scaffold_5660                      80856 15 +    135385 GG----------------------------T---------------------------A-T-A-TT---AGAA-GA-A
i Hystrix_cristata.HysCri_scaffold_5660                  I 1 I 7
s Ictidomys_tridecemlineatus.JH393364.1                    7514523 15 -   7955117 GG----------------------------T---------------------------A-C-A-TT---ATAG-AA-A
i Ictidomys_tridecemlineatus.JH393364.1                  I 1 I 8
s Indri_indri.k141_3655594                                   18100 15 +     31101 GG----------------------------T---------------------------A-T-G-TT---AGAG-GA-A
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22332 15 +     23964 AG----------------------------G---------------------------A-C-A-TT---AGAG-GA-A
i Inia_geoffrensis.IniGeo_flattened_line_48101           I 1 C 0
s Jaculus_jaculus.JH725527.1                               8271303 15 -   9596543 AG----------------------------T---------------------------A-C-A-TT---AGAG-AA-A
i Jaculus_jaculus.JH725527.1                             I 5 I 8
s Kogia_breviceps.KogBre_flattened_line_192630                1599 15 -      3359 AG----------------------------T---------------------------A-C-A-TT---AGAG-GA-A
i Kogia_breviceps.KogBre_flattened_line_192630           I 1 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    12175 20 -     42476 AG----------------------------T----------------------ACAGTA-C-A-CT---AGGT-GA-A
i Lasiurus_borealis.LasBor_scaffold_32767                I 21 I 22
s Lepilemur_ankaranensis.k141_596936                          6734 15 -     23766 GG----------------------------T---------------------------G-C-G-TT---AGAG-GA-A
i Lepilemur_ankaranensis.k141_596936                     C 0 I 5
s Lepilemur_dorsalis.k141_577674                             24681 15 +     45836 GG----------------------------T---------------------------G-C-G-TT---AGAG-GA-A
i Lepilemur_dorsalis.k141_577674                         C 0 I 5
s Lepilemur_ruficaudatus.k141_420445                         31592 15 -     32627 GG----------------------------T---------------------------G-T-G-TT---AGAG-GA-A
i Lepilemur_ruficaudatus.k141_420445                     C 0 I 5
s Lepilemur_septentrionalis.k141_185316                      22736 15 +     54090 GG----------------------------T---------------------------G-C-G-TT---AGAG-GA-A
i Lepilemur_septentrionalis.k141_185316                  C 0 I 5
s Leptonychotes_weddellii.KB714746.1                       3036038 16 +   3914936 AC----------------------------T---------------------------A-CAA-TT---AGAG-GA-A
i Leptonychotes_weddellii.KB714746.1                     I 1 C 0
s Lipotes_vexillifer.KE559953.1                             267413 12 -    662738 AG----------------------------T---------------------------A-C-A-TT---AG----A-A
i Lipotes_vexillifer.KE559953.1                          I 1 C 0
s Lophocebus_aterrimus.ctg367                              1431390 16 +   1826925 TG---------------------------CT---------------------------A-C-G-TT---AGAG-GA-A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             633 15 +     11245 AA----------------------------T---------------------------C-A-G-TC---AGAG-GA-A
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999468 16 +   6120653 AA----------------------------T---------------------------C-A-GTTC---AGAG-GA-A
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214449 15 -  43346337 GG----------------------------T---------------------------G-C-C-CA---AGTG-GA-A
i Loxodonta_africana.GL010049.1                          I 1 C 0
s Lycaon_pictus.CM007581.1                                17951655 16 -  59628241 GC----------------------------T---------------------------A-CAA-TT---ATAG-GA-A
i Lycaon_pictus.CM007581.1                               I 1 C 0
s Macaca_arctoides.k141_2326796                               1575 16 +     40492 TG---------------------------CC---------------------------A-T-G-TT---AGAG-GA-A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670835 16 +  60120075 TG---------------------------CT---------------------------A-T-G-TT---AGAG-GA-A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7333 16 -     26193 TG---------------------------CT---------------------------A-T-G-TT---AGAG-GA-A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75127 16 -    114318 TG---------------------------CT---------------------------A-T-G-TT---AGAG-GA-A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   846 16 -     23192 TG---------------------------CT---------------------------A-T-G-TT---AGAG-GA-A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10299 16 -     29190 TG---------------------------CT---------------------------A-T-G-TT---AGAG-GA-A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18866 16 +     37952 TG---------------------------CT---------------------------A-T-G-TT---AGAG-GA-A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833954 16 + 187317192 TG---------------------------CT---------------------------A-T-G-TT---AGAG-GA-A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452515 16 -  25927173 TG---------------------------CT---------------------------A-T-G-TT---AGAG-GA-A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74715 16 +     89720 TG---------------------------CT---------------------------A-T-G-TT---AGAG-GA-A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1712 16 +     20474 TG---------------------------CT---------------------------A-T-G-TT---AGAG-GA-A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1513 16 -     14993 TG---------------------------CT---------------------------A-T-G-TT---AGAG-GA-A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324386 16 -    668171 TG---------------------------CT---------------------------A-T-G-TT---AGAG-GA-A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15655 16 -     15935 TG---------------------------CT---------------------------A-T-G-TT---AGAG-GA-A
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20452 16 -     45290 TG---------------------------CT---------------------------A-T-G-TT---AGAG-GA-A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87498 14 +     94391 AG----------------------------T---------------------------A-T-A-TT---AGG--GA-A
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 1 C 0
s Mandrillus_leucophaeus.scaffold280                      23932007 16 -  24302211 TG---------------------------CT---------------------------A-T-G-TT---AGAG-GA-A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346185 16 +    752769 TG---------------------------CT---------------------------A-T-G-TT---AGAG-GA-A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15543 15 +    737560 AG----------------------------T---------------------------A-C-A-TT---AGAG-GG-G
i Manis_javanica.JSZB01003497.1                          I 1 I 4
s Manis_pentadactyla.KN006162.1                              46932 15 -    317179 AG----------------------------T---------------------------A-C-A-TT---AGAG-GG-G
i Manis_pentadactyla.KN006162.1                          I 1 I 4
s Marmota_marmota.CZRN01000018.1                          33097373 15 -  40650429 GG----------------------------T---------------------------A-C-a-tt---aaag-aa-a
i Marmota_marmota.CZRN01000018.1                         I 1 I 8
s Megaderma_lyra.MegLyr_scaffold_4542                         6730  9 -    207569 A-----------------------------T---------------------------A-C-A-TT---AG-------
i Megaderma_lyra.MegLyr_scaffold_4542                    I 1 I 5
s Mellivora_capensis.MelCap_flattened_line_69365              6169 16 +     13704 AC----------------------------T---------------------------A-TAA-TT---AGAG-GA-A
i Mellivora_capensis.MelCap_flattened_line_69365         I 1 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3000 15 +     10310 AG----------------------------T---------------------------A-C-G-TT---AGAG-GA-A
i Mesoplodon_bidens.MesBid_scaffold_108144               I 1 C 0
s Microcebus_murinus.CM007674.1                           18283260 15 -  93316391 GG----------------------------T---------------------------A-C-A-TT---AGAG-GA-A
i Microcebus_murinus.CM007674.1                          C 0 I 5
s Micronycteris_hirsuta.MicHir_scaffold_52381                13355 15 -     19307 AG----------------------------T---------------------------G-C-A-CT---AGGG-GA-A
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 1 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849029 15 +   8254450 AG----------------------------C---------------------------A-C-A-TT---AGGT-GA-A
i Miniopterus_natalensis.LDJU01000034.1                  I 1 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32905 15 +     64694 AG----------------------------C---------------------------A-C-A-TT---AGGT-GA-A
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 1 C 0
s Miopithecus_ogouensis.k141_534055                           3742 16 -     28506 TG---------------------------CT---------------------------A-T-G-TT---AAAG-GA-A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62368 16 -     63350 AC----------------------------T---------------------------A-CAA-TT---AGAG-GA-A
i Mirounga_angustirostris.MirAng_flattened_line_22144    I 1 C 0
s Mirza_zaza.k141_952172                                      4615 15 -     37649 GG----------------------------T---------------------------A-T-G-TT---AGAG-GA-A
i Mirza_zaza.k141_952172                                 C 0 I 5
s Monodon_monoceros.MonMon_M_scaffold_103                    26505 15 -    437263 AG----------------------------T---------------------------A-C-A-TT---AGAG-GA-A
i Monodon_monoceros.MonMon_M_scaffold_103                I 1 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137761 15 -    366855 AG----------------------------G---------------------------A-C-A-CG---AGGC-GA-A
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 1 C 0
s Moschus_moschiferus.MosMos_scaffold_61429                  27356 15 -     27816 AG----------------------------A---------------------------T-C-A-TT---AGAG-GA-A
i Moschus_moschiferus.MosMos_scaffold_61429              I 1 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31291 16 +     37127 AC----------------------------T---------------------------A-CAA-TT---ATAG-CA-A
i Mungos_mungo.MunMun_flattened_line_23663               I 1 C 0
s Murina_feae.MurFea_scaffold_85699                           5061  9 +     14753 ----------------------------------------------------------------CT---AGGT-GA-A
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2282 15 +     14296 GT----------------------------T---------------------------G-C-A-TT---AAAG-GA-A
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 1 I 7
s Mustela_putorius.JH418006.1                               297600 16 -  14710649 AC----------------------------T---------------------------A-CAA-TT---AGAG-GA-A
i Mustela_putorius.JH418006.1                            I 1 C 0
s Myotis_brandtii.KE162005.1                                278236  8 -  10118263 AG----------------------------T---------------------------A-C-A-CT------------
i Myotis_brandtii.KE162005.1                             I 1 C 0
s Myotis_davidii.KB100139.1                                1585793  8 -   6019432 AG----------------------------T---------------------------A-C-A-CT------------
i Myotis_davidii.KB100139.1                              I 1 C 0
s Myotis_lucifugus.GL429869.1                              3902002  8 -   4330536 AG----------------------------T---------------------------A-C-A-CT------------
i Myotis_lucifugus.GL429869.1                            I 1 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32561  8 +     33610 AG----------------------------T---------------------------A-C-A-CT------------
i Myotis_myotis.MyoMyo_scaffold_28916                    I 1 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186042 14 +    196477 GA----------------------------T---------------------------G-A-C-TA---AGG--GA-A
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 1 C 0
s Nannospalax_galili.KL204047.1                            2025448 11 -   3037898 ------------------------------------------------------------C-A-TT---AGAG-GC-A
i Nannospalax_galili.KL204047.1                          C 0 I 8
s Nasalis_larvatus.k141_413338                                9755 16 +     21681 TG---------------------------TT---------------------------G-T-G-TT---AGAG-GA-A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865461 15 +   7148211 AG----------------------------T---------------------------A-C-A-TT---AGAG-GA-A
i Neophocaena_asiaeorientalis.KZ687982.1                 I 1 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756326 14 +    783361 -G----------------------------T---------------------------G-C-A-CT---AGGT-GA-A
i Noctilio_leporinus.NocLep_scaffold_251                 I 1 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145916 16 -   9404916 GC----------------------------T---------------------------A-CAA-TT---ATAG-GA-A
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 1 C 0
s Nycticebus_bengalensis.LG01                            102574437 15 - 196305487 AA----------------------------T---------------------------C-A-G-TC---AGAG-GA-A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2123 15 +      8486 AA----------------------------T---------------------------C-A-G-TC---AGAG-GA-A
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744864 15 + 199412804 AA----------------------------T---------------------------C-A-G-TC---AGAG-GA-A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355697 14 +   3988456 GG----------------------------T---------------------------G-C-A-TT---TGA--GA-A
i Ochotona_princeps.JH802162.1                           I 1 C 0
s Odobenus_rosmarus.KB229312.1                              500657 16 -   2017862 AC----------------------------T---------------------------A-CAA-TT---AGAG-GA-A
i Odobenus_rosmarus.KB229312.1                           I 1 C 0
s Odocoileus_virginianus.KZ100018.1                         144589 15 +    630418 AT----------------------------T---------------------------T-C-A-TT---AGAG-GA-A
i Odocoileus_virginianus.KZ100018.1                      I 1 I 5
s Orcinus_orca.KB316932.1                                  2781376 15 -  10937097 AG----------------------------T---------------------------A-C-A-TT---AGAG-GA-A
i Orcinus_orca.KB316932.1                                I 1 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6774 15 -     18566 GA----------------------------T---------------------------G-C-T-TG---AGGG-GA-A
i Orycteropus_afer.OryAfe_flattened_line_144387          I 1 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458670 16 -    559221 GC----------------------------T---------------------------A-CAA-TT---ATAG-GA-A
i Otocyon_megalotis.JAEUCK010005147.1                    I 1 C 0
s Ovis_aries.CM001607.2                                   17584947 15 +  44047080 AG----------------------------T---------------------------T-C-A-TC---AGGG-GA-A
i Ovis_aries.CM001607.2                                  I 1 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173368 15 -    191736 AG----------------------------T---------------------------T-C-A-TC---AGGG-GA-A
i Ovis_canadensis.OviCan_scaffold_2572                   I 1 C 0
s Pan_paniscus.KQ411613.1                                    38549 10 +     80009 --------------------------------------------------------------g-tt---agag-ga-a
i Pan_paniscus.KQ411613.1                                I 2413 T 69
s Pan_troglodytes.CM009242.2                             189137229 16 + 189151597 tg---------------------------ct---------------------------a-t-g-tt---agag-ga-a
i Pan_troglodytes.CM009242.2                             I 141 T 139
s Panthera_onca.PanOnc_flattened_line_3271                  147075 16 +    230217 AC----------------------------T---------------------------A-CAA-TT---ATAG-GA-A
i Panthera_onca.PanOnc_flattened_line_3271               I 1 C 0
s Panthera_pardus.KV860321.1                                259784 16 +  18783137 AC----------------------------T---------------------------A-CAA-TT---ATAG-GA-A
i Panthera_pardus.KV860321.1                             I 1 C 0
s Panthera_tigris.KE722367.1                               4716931 16 -   8748460 AC----------------------------T---------------------------A-CAA-TT---ATAG-GA-A
i Panthera_tigris.KE722367.1                             I 1 C 0
s Pantholops_hodgsonii.KE114653.1                          1264301 15 -   2937107 AG----------------------------T---------------------------T-C-A-TT---AGGG-GA-A
i Pantholops_hodgsonii.KE114653.1                        I 1 C 0
s Papio_anubis.CM001495.2                                183437329 16 + 183742232 TG---------------------------CT---------------------------A-C-G-TT---AGAG-GA-A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1394 16 +     20448 TG---------------------------CT---------------------------G-C-G-TT---AGAG-GA-G
i Papio_cynocephalus.k141_4307930                        C 0 I 93
s Papio_hamadryas.Contig39                                20558013 16 +  20919399 TG---------------------------CT---------------------------A-C-G-TT---AGAG-GA-A
i Papio_hamadryas.Contig39                               C 0 I 279
s Papio_kindae.k141_1936966                                    137 16 +     41871 TG---------------------------CT---------------------------A-C-G-TT---AGAG-GA-G
i Papio_kindae.k141_1936966                              C 0 I 93
s Papio_ursinus.k141_3428135                                  3415 16 +      9205 TG---------------------------CT---------------------------G-C-G-TT---AGAG-GA-G
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8810 16 -     78924 AC----------------------------T---------------------------C-CAG-TT---ATAG-GA-A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 1 C 0
s Perodicticus_ibeanus.k141_855320                            4614 15 +     13100 AA----------------------------T---------------------------C-A-G-TC---AGAG-GA-A
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             2982 15 +     25941 AA----------------------------T---------------------------C-A-G-TC---AGAG-GA-A
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25297 15 +     32600 GG----------------------------A---------------------------A-C-A-TT---AGAA-AA-A
i Perognathus_longimembris.PerPac_flattened_line_34437   I 1 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25787  9 -     29689 ----------------------------------------------------------------TT---TGTA-GA-G
i Petromus_typicus.PetTyp_scaffold_42190                 I 6 I 7
s Phocoena_phocoena.PhoPho_flattened_line_24159               8423 15 +     63832 AG----------------------------T---------------------------A-C-A-TT---AGAG-GA-A
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 1 C 0
s Piliocolobus_badius.k141_1234363                           38271 16 +     62158 TG---------------------------CT---------------------------G-T-G-TT---AGAA-GA-A
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        32998 16 +     89929 TG---------------------------CT---------------------------G-T-G-TT---AGAG-GA-A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34414 16 +     51399 TG---------------------------CT---------------------------G-T-G-TT---AGAG-GA-A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290635 16 -  14605196 TG---------------------------CT---------------------------G-T-G-TC---AGAG-GA-A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              375 15 +     22620 AG----------------------------T---------------------------A-C-A-CT---AGGT-AA-A
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 1 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34129 15 +     35617 AG----------------------------T---------------------------A-C-A-TT---AGAG-GA-A
i Platanista_gangetica.PlaMin_flattened_line_32310       I 1 C 0
s Pongo_abelii.CM009266.2                                189125689 16 + 189387572 TG---------------------------CT---------------------------A-T-G-TT---AGAG-GA-T
i Pongo_abelii.CM009266.2                                I 515 T 206
s Pongo_pygmaeus.ctg66                                     9565019 16 +   9816681 TG---------------------------CT---------------------------A-T-G-TT---AGAG-GA-A
i Pongo_pygmaeus.ctg66                                   I 2 I 274
s Presbytis_comata.k141_677006                               67915 16 -     81375 TG---------------------------TT---------------------------G-T-G-TT---AGAG-GA-A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9742 16 +     10147 TG---------------------------TT---------------------------G-T-G-TT---AGAG-GA-A
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9937 15 -     22811 GG----------------------------T---------------------------G-C-C-TA---AGAG-GA-A
i Procavia_capensis.ProCapCap_scaffold_85530             I 1 C 0
s Propithecus_coquerelli.NW_012148875.1                     986314 15 +   2598838 GG----------------------------T---------------------------A-C-G-TT---AGAG-GA-A
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 2
s Propithecus_coronatus.k141_347390                          24603 15 +     38485 GG----------------------------T---------------------------A-C-G-TT---AGAG-GA-A
i Propithecus_coronatus.k141_347390                      C 0 I 2
s Propithecus_diadema.k141_357118                              764 15 +      4256 GG----------------------------T---------------------------A-C-G-TT---AGAG-GA-A
i Propithecus_diadema.k141_357118                        C 0 I 2
s Propithecus_edwardsi.k141_1176054                          22122 15 +     35766 GG----------------------------T---------------------------A-C-G-TT---AGAG-GA-A
i Propithecus_edwardsi.k141_1176054                      C 0 I 2
s Propithecus_perrieri.k141_1200571                            305 15 -     24134 GG----------------------------T---------------------------A-C-G-TT---AGAG-GA-A
i Propithecus_perrieri.k141_1200571                      C 0 I 2
s Propithecus_tattersalli.k141_790011                        24117 15 -     67325 GG----------------------------T---------------------------A-C-G-TT---AGAG-GA-A
i Propithecus_tattersalli.k141_790011                    C 0 I 2
s Propithecus_verreauxi.k141_956661                            362 15 -      6182 GG----------------------------T---------------------------A-C-G-TT---AGAG-GA-A
i Propithecus_verreauxi.k141_956661                      C 0 I 2
s Pteronotus_parnellii.KE909381.1                            11143 15 -     21811 AG----------------------------T---------------------------G-T-G-CT---AGGT-GA-A
i Pteronotus_parnellii.KE909381.1                        I 1 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36611 16 +     42204 AC----------------------------T---------------------------A-CAA-TT---AGAG-GA-C
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 1 C 0
s Pteropus_alecto.KB030862.1                              22973626  9 +  28871421 --------------------------------------------------------------A-TT---AGG--GA-A
i Pteropus_alecto.KB030862.1                             I 6 C 0
s Pteropus_vampyrus.KN534172.1                                1563  9 -      8028 --------------------------------------------------------------A-TT---AGG--GA-A
i Pteropus_vampyrus.KN534172.1                           I 6 C 0
s Puma_concolor.QAVW01001104.1                            20270242 16 -  38429054 AC----------------------------T---------------------------A-CAA-TT---TTAA-GA-A
i Puma_concolor.QAVW01001104.1                           I 1 C 0
s Pygathrix_cinerea.k141_1153803                              9744 16 -     91421 TG---------------------------TT---------------------------G-T-G-TT---AGAG-GA-A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603878 16 +   7812017 TG---------------------------TT---------------------------G-T-G-TT---AGAG-GA-A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9717 16 -     72585 TG---------------------------TT---------------------------G-T-G-TT---AGAG-GA-A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4837 15 +     55207 AT----------------------------T---------------------------T-C-A-TT---AGAG-GA-A
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 1 I 5
s Rhinolophus_sinicus.LVEH01000134.1                        366854 15 -   3329780 AG----------------------------T---------------------------A-C-A-TG---AGG-ACA-A
i Rhinolophus_sinicus.LVEH01000134.1                     I 1 C 0
s Rhinopithecus_bieti.k119_217274                             1130 16 -     11128 TG---------------------------TT---------------------------G-T-G-TG---AGAG-GA-A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230507 16 - 195417433 TG---------------------------TT---------------------------G-T-G-TG---AGAG-GA-A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7666215 16 +   7961872 TG---------------------------TT---------------------------G-T-G-TG---AGAG-GA-A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84606 15 -     96226 AA----------------------------T---------------------------AAT-G-TT---AGG--GA-A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 1 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3490 14 +      4321 A-----------------------------T---------------------------T-C-A-TT---AGGG-GA-A
i Saiga_tatarica.SaiTat_scaffold_373180                  I 1 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151336 13 -    313613 ------------------------------T---------------------------A-C-A-TT---GGAG-GA-A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          14259 16 -     19888 TG---------------------------TT---------------------------G-T-G-TT---AGAG-GA-A
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21464 16 +     39453 TG---------------------------TT---------------------------G-T-G-TT---AGAG-GA-A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            1988 16 +     27826 TG---------------------------TT---------------------------G-T-G-TT---AGAG-GA-A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1510 16 -     19483 TG---------------------------TT---------------------------G-T-G-TT---AGAG-GA-A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1572 16 +      7198 TG---------------------------TT---------------------------G-T-G-TT---AGAG-GA-A
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9832 16 +     15514 TG---------------------------TT---------------------------G-T-G-TT---AGAG-GA-A
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187626 15 -    191337 AG----------------------------T---------------------------G-T-A-TT---AGAG-AA-A
i Solenodon_paradoxus.SolPar_flattened_line_5840         I 1 C 0
s Sorex_araneus.JH798187.1                                13646972  7 -  18376816 TG----------------------------A---------------------------A-A-G-T-------------
i Sorex_araneus.JH798187.1                               I 2 I 1
s Spermophilus_dauricus.KZ294078.1                         1948165 15 -   3870691 GG----------------------------T---------------------------A-C-A-TT---ATAG-AA-A
i Spermophilus_dauricus.KZ294078.1                       I 1 I 8
s Spilogale_gracilis.SpiGra_flattened_line_13525             27153 16 +     97271 AA----------------------------T---------------------------A-CAA-TT---AGAG-GA-A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14160 16 -    196729 AC----------------------------T---------------------------A-CAA-TC---ATAG-CA-A
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 C 0
s Sus_scrofa.CM000828.4                                   62882408 15 -  69701581 AA----------------------------T---------------------------T-C-A-TT---AGAG-GA-C
i Sus_scrofa.CM000828.4                                  I 1 C 0
s Symphalangus_syndactylus.tarseq_199                      1088015 16 -   1523678 TG---------------------------CT---------------------------A-T-G-TT---AGAG-GA-A
i Symphalangus_syndactylus.tarseq_199                    I 209 T 207
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6764  9 +     41958 ----------------------------------------------------------------TC---AGGT-GA-A
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 6 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69404 14 +    116680 GA----------------------------T---------------------------G-A-C-TA---AGG--GA-A
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 1 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115141 15 -    156842 AG----------------------------T---------------------------A-C-A-TT---AGAG-GA-A
i Tapirus_indicus.TapInd_scaffold_9301                   I 1 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383596 15 +    539355 AG----------------------------T---------------------------A-C-A-TT---AGAG-GA-A
i Tapirus_terrestris.TapTer_scaffold_755                 I 1 C 0
s Tarsius_lariang.k141_2201908                               10589 16 +     70052 GG--G-------------------------T---------------------------A-T-G-TT---AGAG-AA-A
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               14894 16 +     25099 GG--G-------------------------T---------------------------A-T-G-TT---AGAG-AA-A
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422838 16 + 186847797 TG---------------------------CT---------------------------A-C-G-TT---AGAG-GA-A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103128  9 +    114563 ----------------------------------------------------------------TT---AGAG-GA-A
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 6 I 7
s Tonatia_saurophila.TonSau_scaffold_294                     78899 15 +    610378 AG----------------------------T---------------------------G-C-A-CT---AGGG-GA-A
i Tonatia_saurophila.TonSau_scaffold_294                 I 1 C 0
s Trachypithecus_auratus.k141_722599                          5569 16 -     20410 TG---------------------------TT---------------------------G-T-G-TT---AGAG-GA-A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9761 16 +     15221 TG---------------------------TT---------------------------G-T-G-TT---AGAG-GA-A
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5669 16 +     19930 TG---------------------------TT---------------------------G-T-G-TT---AGAG-GA-A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2096 16 -     19997 TG---------------------------TT---------------------------G-T-G-TT---AGAG-GA-A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42215 16 -     60166 TG---------------------------TT---------------------------G-T-G-TT---AGAG-GA-A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9687 16 -     27529 TG---------------------------TT---------------------------G-T-G-TT---AGAG-GA-A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9627 16 -     18194 TG---------------------------TT---------------------------G-T-G-TT---AGAG-GA-A
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3363 16 -     21137 TG---------------------------TT---------------------------G-T-G-TT---AGAG-GA-A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2065 16 -     10723 TG---------------------------TT---------------------------G-T-G-TT---AGAG-GA-A
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1218 16 +      9834 TG---------------------------TT---------------------------G-T-G-TT---AGAG-GA-A
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19536 16 +     32220 TG---------------------------TT---------------------------G-T-G-TT---AGAG-GA-A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933633 16 +   6242583 TG---------------------------TT---------------------------G-T-G-TT---AGAG-GA-A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2878 16 +     20839 TG---------------------------TT---------------------------G-T-G-TT---AGAG-GA-A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    615 15 -      1748 AG----------------------------T---------------------------T-C-A-TT---AGAG-GA-A
i Tragulus_javanicus.TraJav_scaffold_140459              I 220 I 2
s Tupaia_chinensis.KB320699.1                              2149526 42 +   4065304 GG----------------------------TTNNNNNNNNNNNNNNNNNNNNNNNNNNN-N-N-NN---AGAG-GA-A
i Tupaia_chinensis.KB320699.1                            I 1 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     3145 15 -     10553 GG----------------------------T---------------------------C-C-A-GC---AGAG-GA-A
i Tupaia_tana.TupTan_flattened_line_97126                I 1 I 9
s Tursiops_truncatus.MRVK01000835.1                       15737623 15 +  33153633 AG----------------------------T---------------------------A-C-A-TT---AGAG-GA-A
i Tursiops_truncatus.MRVK01000835.1                      I 1 C 0
s Uropsilus_gracilis.UroGra_scaffold_97021                    1854 15 -      4736 AG----------------------------T---------------------------A-C-A-TT---GGAG-GA-A
i Uropsilus_gracilis.UroGra_scaffold_97021               I 1 C 0
s Ursus_maritimus.KK499267.1                               4846854 16 -   5085361 AC----------------------------T---------------------------A-CAG-TT---AGAG-GA-A
i Ursus_maritimus.KK499267.1                             I 1 C 0
s Vicugna_pacos.KN270157.1                                 5368327 15 -   5488506 AG----------------------------T---------------------------A-C-C-TT---AGAG-GA-A
i Vicugna_pacos.KN270157.1                               I 1 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7331 16 -     43706 GC----------------------------T---------------------------A-CAA-TT---ATAG-GA-A
i Vulpes_lagopus.VulLag_flattened_line_30954             I 1 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19660 15 -     24430 GG----------------------------T---------------------------A-C-A-TT---AAAG-GA-A
i Xerus_inauris.XerIna_scaffold_48378                    I 1 I 8
s Zalophus_californianus.ZalCal_flattened_line_63728          1779 16 +      2932 AC----------------------------T---------------------------A-CAA-TT---AGAG-GA-A
i Zalophus_californianus.ZalCal_flattened_line_63728     I 1 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9937 15 +     63895 GC----------------------------C---------------------------A-T-A-TT---AGAG-AA-A
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 5 I 8
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11315 15 +     12536 AG----------------------------T---------------------------A-C-A-TT---AGAG-GA-A
i Ziphius_cavirostris.ZipCav_flattened_line_71469        I 1 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   1806  0 +      8208 C
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Papio_papio.k141_802527                                     3418 114 +     27711 I
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    15418  9 -    145209 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            4748  0 -      6351 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                        792 16 +     62944 CTCT--A---------------------------TAAA-TG---A---------ATCA
s Acinonyx_jubatus.LLWD01001279.1                           823244 22 -   1699592 CTCT--A---------------------------CTAA-TT---ATG-CT-GA-ATCG
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506935 22 -  29979442 CTCT--A---------------------------CAAG-TT---ATG-CT-Ga-atag
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             75159 22 -    347723 CTCT--A---------------------------CAAA-TT---ATG-CT-GA-ATAG
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64946 14 -     89534 -------------------------------------A-TG---ATG-CC-AA-ATTG
i Allactaga_bullata.AllBul_scaffold_9566                 I 8 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9265 16 -     52922 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9192 16 -     28001 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9318 16 -      9772 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            475 16 -     12518 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675109 22 -   2318259 CTCT--A---------------------------CAAC-TC---ACA-CT-GA-ATCA
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183058 22 +    412891 CTCC--A---------------------------TCAA-TG---ACA-CA-GC-ATCA
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97561 22 -    100397 CCCT--A---------------------------TAAC-TC---ACA-CT-GA-ATCA
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7226 14 +     20879 -------------------------------------A-TG---ATG-CT-CA-ATTG
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 8 C 0
s Arctocebus_calabarensis.k141_288239                        14396 22 +     17124 CTCT--G---------------------------TCAA-TG---CTG-TT-GA-ATAG
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2410 22 +     43469 CTCC--G---------------------------TCAA-TT---ACA-CA-GC-ATCA
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  49260 17 -     92717 ----------------------------------TAAA-TG---GTA-CT-GG-ATCG
i Avahi_laniger.k141_765380                              I 2 C 0
s Avahi_peyrierasi.k141_1424874                              49885 17 +     85213 ----------------------------------TAAA-TG---GTA-CT-GG-ATCG
i Avahi_peyrierasi.k141_1424874                          I 2 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191494 22 +  23207421 CTCT--A---------------------------TAAA-TT---ACA-CT-GA-ATCA
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         1960 22 -     18090 CTCT--A---------------------------TAAA-TT---ACA-CT-GA-ATCA
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26031 22 +     34529 CTCT--A---------------------------CAAC-TC---ACA-CT-GA-ATCA
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    199070 22 -    288883 CTCT--A---------------------------TAAC-TC---ACA-CT-GA-ATCA
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20272275 22 +  48749331 CTCT--A---------------------------TAAC-TC---ACA-CT-GA-NTCA
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1124835 22 -   1948126 CTCT--A---------------------------TAAC-TC---ACA-CT-GA-ATCA
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18082913 22 +  45695690 CTCT--A---------------------------TAAC-TC---ACA-CT-GA-ATCA
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2818402 22 +   4408762 CTCT--A---------------------------TAAC-TC---ACA-CT-GA-ATCA
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998853 22 -  17673402 CTCC--G---------------------------TAAC-TT---ATG-CC-AA-ATCA
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331317 22 -   7040546 CTCC--G---------------------------TAAC-TT---ATG-CC-AA-ATCA
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399593 22 -   1652518 CTCC--G---------------------------TAAC-TT---ATG-CC-AA-ATCA
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795723 22 -  60362399 CTCT--A---------------------------CAAA-TT---ATG-CT-CA-ATTG
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181780 22 -    185531 CTCT--A---------------------------CAAA-TT---ATG-CT-CA-ATTG
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031167 22 -   9314153 CTCT--A---------------------------CAAA-TT---ATG-CT-CA-ATTG
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955431 22 -  59632846 CTCT--A---------------------------CAAA-TT---ATG-CT-CA-ATTG
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496732 22 +  63665305 CTCT--A---------------------------CAAA-TT---ATG-CT-CA-ATTG
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18829227 22 +  46296322 CTCT--A---------------------------CAAC-TC---ACA-CT-GA-GCCA
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18059947 22 -  44709034 CTCT--A---------------------------CAAC-TC---ACA-CT-GA-GCCA
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           140990 22 -    496798 ttca--a---------------------------caaa-tg---atg-cc-ga-atgg
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2828 22 -     11696 CTCC--A---------------------------TCAA-TT---ACA-CA-GC-ATCA
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133602 14 +    179628 -------------------------------------A-CA---ATG-CT-GA-GTTG
i Castor_canadensis.CasCan_scaffold_2074                 I 6 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89160 22 +    217609 ATCT--A---------------------------TAAA-TT---ACA-CT-GG-AATG
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 41
s Cavia_aperea.AVPZ01000300.1                             18347422 14 -  23392119 -------------------------------------AATT---A-G-CT-AA-CTTG
i Cavia_aperea.AVPZ01000300.1                            I 7 C 0
s Cavia_porcellus.DS562891.1                              18359682 14 -  23407841 -------------------------------------AATT---A-G-CT-AA-CTTG
i Cavia_porcellus.DS562891.1                             I 7 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98557 14 +    143979 -------------------------------------AATT---A-G-CT-AA-CTTG
i Cavia_tschudii.CavTsc_scaffold_8919                    I 7 C 0
s Cephalopachus_bancanus.k141_2037105                         4906 22 -      8605 TTCA--A---------------------------CAAA-TG---ATG-CC-GA-ATGG
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227826 22 +  27778364 CTCT--A---------------------------TAAA-TT---ACA-CC-GA-atca
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2544 22 -      3715 CTCT--A---------------------------TAAA-TT---ACA-CC-GA-ATCA
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470236 16 +   4669795 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8785 16 -     19203 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3204 16 +      8260 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3434 16 +     27781 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3580 16 -     20310 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6564 16 +     29689 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             917 16 +      9989 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9252 16 -     27936 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9271 16 -     11289 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811647 16 +  39242232 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217338 16 -  21565898 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34458 16 -     53127 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1750 16 +      7159 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9263 16 -     27947 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9239 16 +     17596 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39733 16 -     41420 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4748 22 -      6351 CGTG--G---------------------------CAAA-TG---ATG-CT-GA-ATCA
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16679 16 -     52598 ----------------------------------TAAA-TG---GTG-CT-GA-ACT-
i Cheirogaleus_major.k141_333249                         I 2 C 0
s Cheirogaleus_medius.k141_1055463                           12028 16 +     57038 ----------------------------------TAAA-TG---GTG-CT-GA-ACT-
i Cheirogaleus_medius.k141_1055463                       I 2 C 0
s Chinchilla_lanigera.JH722012.1                           1248454 15 +   2543920 -------------------------------------AGTG---ATG-CT-AA-ATTG
i Chinchilla_lanigera.JH722012.1                         I 7 C 0
s Chlorocebus_aethiops.ctg25                              18423202 16 -  18827391 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9645 16 -     50209 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416650 16 + 135778131 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15105 22 +     19366 CTTG--A---------------------------TAAA-TG---ATG-CT-GA-ATCA
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170204 22 +    839153 CTTG--A---------------------------TAAA-TG---ATG-CT-GA-atca
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1905179 16 +   2368649 CTGT--A---------------------------TAGA-TG---A---------ATCG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944824 43 + 200372422 CTGT--ATACACCTGCTGTGTTAGAGGAACTGTACAGA-TG---A---------ATCG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31718 16 +     84244 CTGT--A---------------------------TAGA-TG---A---------ATCG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545935 22 -  53390261 CTTT--A---------------------------GGAA-TT---ATG-CT-GC-ATCA
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10447 22 -     20389 CTCT--A---------------------------TGAA-TT---AAG-CA-GA-ATCA
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_287352               333  9 +      4208 CTCCTTG---------------------------TA----------------------
i Crocidura_indochinensis.CroInd_scaffold_287352         I 10 I 18
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24189 22 -     87169 TTCT--A---------------------------CTAA-TT---ATG-CT-GA-ATCG
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2806 15 +      5455 -------------------------------------AATG---ATG-CT-AA-ATTG
i Cuniculus_paca.CunPac_flattened_line_231100            I 7 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1189 15 +      3576 -------------------------------------AATG---ATG-CT-AA-ATTG
i Dasyprocta_punctata.DasPun_flattened_line_206793       I 7 C 0
s Dasypus_novemcinctus.JH564415.1                            61018 22 +   2246927 TGTG--A---------------------------TAAA-TG---ATG-CC-GA-atca
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532843 22 -  12879189 CTCT--G---------------------------TAAA-TG---GTG-TT-GA-ACTG
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811130 22 +  35494412 CTCT--A---------------------------TAAA-TT---ACG-CC-GA-ATCA
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8627859 22 +  20541912 CTCC--A---------------------------TTAA-TT---A-GACA-GC-ATCA
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669359 22 +   1390856 CTCT--A---------------------------TAAA-TT---ACA-CT-GA-ATCG
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2434 22 +    198055 ATCT--A---------------------------TAAA-TT---ACA-CC-GA-ATCA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34232 15 +     67921 -------------------------------------AGTG---ATG-CT-AA-ATTG
i Dinomys_branickii.DinBra_scaffold_21862                I 7 C 0
s Dipodomys_ordii.KN672350.1                              18895763 14 +  37912305 -------------------------------------a-tg---ttt-ct-cC-ATTG
i Dipodomys_ordii.KN672350.1                             I 8 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  11973 14 +     14536 -------------------------------------A-TG---TTT-CT-TC-ATTG
i Dipodomys_stephensi.DipSte_scaffold_75855              I 8 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31446 15 -     42551 -------------------------------------ACCT---ATG-CT-AA-ATTG
i Dolichotis_patagonum.DolPat_scaffold_30833             I 7 C 0
s Eidolon_helvum.KE759718.1                                   7366 21 +     11740 CTCT--A---------------------------TAAA-TT---A-C-CA-GA-AGCA
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310231 22 +    607251 CTCT--A---------------------------TAAC-TC---ACA-CT-GA-ATCA
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1088954 22 +  10337057 CTCG--A---------------------------TAAA-TG---GTA-CT-GA-AGTG
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16325721 22 -  41312741 CTCT--A---------------------------CAAA-TT---ATG-CT-CA-GTCG
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144016 22 -  14770903 ATCT--A---------------------------TAAA-TT---ACA-CA-GA-ATCA
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279701 22 +   4378816 CTCT--A---------------------------CAAA-TT---ACA-CT-GA-ATCA
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527522 22 -  39960074 CTCT--A---------------------------CAAA-TT---ACA-CT-GA-ATCA
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29537 22 +    498745 CTCT--A---------------------------CAAA-TT---ACA-CT-GA-ATCA
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3325291 22 -   7059049 TGT-T-A---------------------------CAAA-TT---ATG-CT-GA-ATAA
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21199881 16 -  21539334 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10806 22 +    133382 CTCT--A---------------------------TAAA-TT---ACA-CT-GA-ATCA
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24743 22 -     44125 CTCT--A---------------------------TAAA-TT---ACA-CT-GA-ATCA
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.AANG03299807.1                                   366 22 -       507 CTCT--A---------------------------CTAA-TT---ATG-CT-GA-ATCG
i Felis_catus.AANG03299807.1                             C 0 C 0
s Felis_catus_fca126.CM031415.1                           20191944 22 + 205367284 CTCT--A---------------------------CTAA-TT---ATG-CT-GA-ATCG
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  5469 22 -     36744 CTCT--A---------------------------CTAA-TT---ATG-CT-GA-ATCA
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             848456 15 +   3816255 -------------------------------------AGTG---ATG-CT-GG-ATTG
i Fukomys_damarensis.KN121974.1                          I 7 C 0
s Galagoides_demidoff.k141_31856                              3156 25 -      3432 cact--t---------------------------taga-tgcctata-tt-ca-aaaa
i Galagoides_demidoff.k141_31856                         I 7 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25413 22 +     26054 CTCT--G---------------------------TGAA-TG---ATG-CT-GA-ACTG
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30311 14 +     49224 -------------------------------------A-TG---ATG-CT-GA-ATTT
i Glis_glis.GliGli_scaffold_19807                        I 7 C 0
s Gorilla_beringei.k141_3596273                              10370 10 -     32273 CTCT--A---------------------------TAAA-T------------------
i Gorilla_beringei.k141_3596273                          T 140 I 24
s Gorilla_gorilla.CYUI03001814.1                             26635 16 -     31004 ctct--a---------------------------taaa-tg---a---------atca
i Gorilla_gorilla.CYUI03001814.1                         n 106 T 150
s Graphiurus_murinus.GraMur_scaffold_10447                   30039 14 +     78134 -------------------------------------A-TG---ATG-CT-CA-ATTG
i Graphiurus_murinus.GraMur_scaffold_10447               I 7 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238106 22 +    327341 CTCT--G---------------------------TTAA-TT---ATG-CT-GA-ATCG
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17431 22 +     36099 CTCT--A---------------------------CAAC-TC---ACA-CT-GA-ACCA
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20659335 15 +  22651954 -------------------------------------AGTG---ATG-CT-GA-CTTG
i Heterocephalus_glaber.JH602082.1                       I 7 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 191 22 +       961 CTCT--G---------------------------TGAA-GG---A-C-CTTGC-ATTG
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111994 14 +    128679 -------------------------------------A-TT---ACG-CT-GA-ATCG
i Hippopotamus_amphibius.HipAmp_scaffold_9076            I 8 C 0
s Hipposideros_armiger.JXIK01000431.1                       108332 14 +   1711038 -------------------------------------A-TT---ATG-CA-GA-ATCA
i Hipposideros_armiger.JXIK01000431.1                    I 7 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39773 14 +     43066 -------------------------------------A-TT---ATG-CA-GA-ATCA
i Hipposideros_galeritus.HipGal_scaffold_29171           I 7 C 0
s Hoolock_leuconedys.ctg274                                    429209 10 +    630532 CTCT--A---------------------------CAAA-T------------------
i Hoolock_leuconedys.ctg274                                 C 0 I 209
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40571 22 +     55795 CTCT--A---------------------------CTAA-TT---ATG-CT-GA-ATTG
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19804 15 -    143317 -------------------------------------AACT---CTG-CT-AA-ATTG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 7 C 0
s Hylobates_agilis.k141_307679                               12127 10 -     15490 CTCT--A---------------------------CAAA-T------------------
i Hylobates_agilis.k141_307679                           T 206 I 211
s Hylobates_klossii.k141_282416                              54132 10 +     67168 CTCT--A---------------------------CAAA-T------------------
i Hylobates_klossii.k141_282416                          T 206 I 211
s Hylobates_pileatus_b.LG02                                     189537990  9 - 191637585 CTCT--A---------------------------TAAT--------------------
i Hylobates_pileatus_b.LG02                                     I 205 I 6
s Hylobates_pileatus_a.tarseq_633                            3330677 10 -  11177569 CTCT--A---------------------------CAAA-T------------------
i Hylobates_pileatus_a.tarseq_633                          T 206 I 211
s Hystrix_cristata.HysCri_scaffold_5660                      80878 15 +    135385 -------------------------------------AATA---ATG-CT-GC-ATTG
i Hystrix_cristata.HysCri_scaffold_5660                  I 7 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514546 14 -   7955117 -------------------------------------A-TG---ATG-CT-GA-ATTg
i Ictidomys_tridecemlineatus.JH393364.1                  I 8 C 0
s Indri_indri.k141_3655594                                   18115 22 +     31101 CTCT--G---------------------------TAAA-TG---GTG-CT-GG-ATTG
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22347 22 +     23964 CTCT--A---------------------------TAAA-TT---ACG-CT-GA-ATCA
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271326 14 -   9596543 -------------------------------------A-TG---ATG-CC-AA-ATTG
i Jaculus_jaculus.JH725527.1                             I 8 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1614 22 -      3359 CTCT--A---------------------------TAAA-TT---ACG-CT-GA-ATCA
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_50988                    11881 22 +     29960 TTCT--A---------------------------TAAA-TG---ACA-CA-GA-ATCA
i Lasiurus_borealis.LasBor_scaffold_50988                I 16 T 40
s Lepilemur_ankaranensis.k141_596936                          6754 17 -     23766 ----------------------------------TAAA-TG---GTG-CT-GA-ATTG
i Lepilemur_ankaranensis.k141_596936                     I 5 C 0
s Lepilemur_dorsalis.k141_577674                             24701 17 +     45836 ----------------------------------TAAA-TG---GTG-CT-GA-ATTG
i Lepilemur_dorsalis.k141_577674                         I 5 C 0
s Lepilemur_ruficaudatus.k141_420445                         31612 17 -     32627 ----------------------------------TAAA-TG---GTG-CT-GA-ATTG
i Lepilemur_ruficaudatus.k141_420445                     I 5 C 0
s Lepilemur_septentrionalis.k141_185316                      22756 17 +     54090 ----------------------------------TAAA-TG---GTG-CT-GA-ATTG
i Lepilemur_septentrionalis.k141_185316                  I 5 C 0
s Leptonychotes_weddellii.KB714746.1                       3036054 22 +   3914936 CTCT--A---------------------------CAAA-TT---ATG-CT-ga-attg
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             267425 22 -    662738 CTCT--A---------------------------TAAA-TT---ATG-CC-GA-ATCA
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1431406 16 +   1826925 CTGT--A---------------------------CAGA-TG---A---------ATCA
i Lophocebus_aterrimus.ctg367                            C 0 I 373
s Loris_lydekkerianus.k141_2539221                             648 20 +     11245 CTCT--G---------------------------TCAA-TG---GTG-TT-GA-AT--
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999484 20 +   6120653 CTCT--G---------------------------TCAA-TG---GTG-TT-GA-AT--
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214464 22 -  43346337 CTCT--G---------------------------TAAA-GG---ACA-CT--ACATTG
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951671 22 -  59628241 CTCT--A---------------------------CAAA-TT---ATG-CT-CA-ATTG
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               1591 16 +     40492 CTGT--G---------------------------TAGA-TG---A---------ATCA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670851 16 +  60120075 CTGT--G---------------------------TAGA-CG---A---------ATCA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7349 16 -     26193 CTGT--G---------------------------TAGA-TG---A---------ATCA
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75143 16 -    114318 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   862 16 -     23192 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10315 16 -     29190 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18882 16 +     37952 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833970 16 + 187317192 CTGT--G---------------------------TAGA-CG---A---------ATCA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452531 16 -  25927173 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74731 16 +     89720 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1728 16 +     20474 CTGT--G---------------------------TAGA-CG---A---------ATCA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1529 16 -     14993 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324402 16 -    668171 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15671 16 -     15935 CTGT--G---------------------------TAGA-CG---A---------ATCA
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20468 16 -     45290 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87512 21 +     94391 CTCT--A---------------------------TAAA-TT---A---CTAGA-AGCA
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23932023 16 -  24302211 CTGT--A---------------------------CAGA-TG---A---------ATCA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346201 16 +    752769 CTGT--A---------------------------CAGA-TG---A---------ATCA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15562 16 +    737560 -----------------------------------AAA-AT---ATG-Ct-ga-attg
i Manis_javanica.JSZB01003497.1                          I 4 C 0
s Manis_pentadactyla.KN006162.1                              46951 16 -    317179 -----------------------------------AAA-CT---ATG-CT-ga-attg
i Manis_pentadactyla.KN006162.1                          I 4 C 0
s Marmota_marmota.CZRN01000018.1                          33097396 14 -  40650429 -------------------------------------a-TG---ATG-CT-GA-atta
i Marmota_marmota.CZRN01000018.1                         I 8 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6744  4 -    207569 ------------------------------------------------------ATCA
i Megaderma_lyra.MegLyr_scaffold_4542                    I 5 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6185 22 +     13704 CTCT--A---------------------------CAAA-TT---ATG-CT-GA-TTCA
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3015 22 +     10310 CTCT--A---------------------------TAAA-TT---ATG-CC-GA-ATCA
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18283280 17 -  93316391 ----------------------------------TACA-TG---GTG-CT-GA-ATTG
i Microcebus_murinus.CM007674.1                          I 5 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13370 22 -     19307 CTCC--A---------------------------TCAA-TC---ACA-CA-GC-ATCA
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849044 22 +   8254450 CTCT--A---------------------------TAAG-CT---ACa-ca-ga-atca
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32920 22 +     64694 CTCT--T---------------------------TAAG-CT---ACA-CA-GA-ATCA
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3758 16 -     28506 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62384 22 -     63350 CTCT--A---------------------------CAAA-TT---ATG-CT-GA-ATTG
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      4635 17 -     37649 ----------------------------------TACA-TG---GTG-CT-GA-ATTG
i Mirza_zaza.k141_952172                                 I 5 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26520 22 -    437263 CTCT--A---------------------------TAAA-TT---ACG-CC-GA-ATCA
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137776 22 -    366855 CTCC--A---------------------------TCAA-TT---ATA-CA-GC-ATCA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_61429                  27371 22 -     27816 CTCT--A---------------------------TAAC-TC---ACA-CT-GA-ATCA
i Moschus_moschiferus.MosMos_scaffold_61429              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31307 22 +     37127 CTCT--A---------------------------CTAA-TT---ATG-CT-GA-ATCG
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5070 22 +     14753 ATCT--A---------------------------TAAA-CT---ACA-CA-GA-ATCA
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2304 14 +     14296 -------------------------------------A-TG---GTG-CT-GA-ATTT
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 7 C 0
s Mustela_putorius.JH418006.1                               297616 22 -  14710649 CTCT--A---------------------------CAAA-TT---ATG-CT-GA-ATCG
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                278244 18 -  10118263 ------A---------------------------TAAA-TT---ACA-CA-GA-ATCA
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585801 18 -   6019432 ------A---------------------------TAAA-TT---ATA-CA-GA-ATCA
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902010 18 -   4330536 ------A---------------------------TAAA-TT---ACA-CA-GA-ATCA
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32569 18 +     33610 ------A---------------------------TAAA-TT---ACA-CA-GA-ATCA
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186056 22 +    196477 CATG--A---------------------------TAAT-TG---ATA-CT-GG-ATCA
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025467 14 -   3037898 -------------------------------------A-TG---ATG-CT-GA-ATTG
i Nannospalax_galili.KL204047.1                          I 8 C 0
s Nasalis_larvatus.k141_413338                                9771 16 +     21681 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865476 22 +   7148211 CTCT--A---------------------------TAAA-TT---ACG-CC-GA-ATCA
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756340 22 +    783361 CTCC--A---------------------------TAAC-TT---ACA-CA-CC-AGCA
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145932 22 -   9404916 CTCT--A---------------------------CAAA-TT---ATG-CT-CA-ATCG
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102574452 20 - 196305487 CTCT--G---------------------------TCAA-TG---GTG-TT-GA-AT--
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2138 20 +      8486 CTCT--G---------------------------TCAA-TG---GTG-TT-GA-AT--
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744879 20 + 199412804 CTCT--G---------------------------TCAA-TG---GTG-TT-GA-AT--
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355711 22 +   3988456 CACA--T---------------------------TAAA-AG---ATG-CT-GA-TGTA
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              500673 22 -   2017862 CTCT--A---------------------------CAAA-AA---ATG-Ct-ga-atca
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         144609 16 +    630418 -----------------------------------AAC-TC---ACA-CT-GA-ATCA
i Odocoileus_virginianus.KZ100018.1                      I 5 C 0
s Orcinus_orca.KB316932.1                                  2781391 22 -  10937097 CTCT--A---------------------------TAAA-TT---ACG-CC-AA-ATCA
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6789 22 -     18566 CTCT--A---------------------------TAAA-TG---ATA-TT-GA-AATG
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458686 22 -    559221 CTCT--A---------------------------CAAA-TT---ATG-CT-CA-ATTG
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17584962 22 +  44047080 CTCT--A---------------------------CAAC-TC---ACA-CT-GA-ACCA
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173383 22 -    191736 CTCT--A---------------------------CAAC-TC---ACA-CT-GA-ACCA
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    38490  8 +     80009 ctct--a---------------------------taa---------------------
i Pan_paniscus.KQ411613.1                                T 69 T 2328
s Pan_troglodytes.CM009242.2                             189137106 16 + 189151597 CTCT--A---------------------------CAaa-tg---a---------atca
i Pan_troglodytes.CM009242.2                             T 139 N 0
s Panthera_onca.PanOnc_flattened_line_3271                  147091 22 +    230217 CTCT--A---------------------------CTAA-TT---ATG-CT-GT-ATCG
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                259800 22 +  18783137 CTCT--A---------------------------CTAA-TT---ATG-CT-GT-ATCG
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4716947 22 -   8748460 CTCT--A---------------------------CTAA-TT---ATG-CT-GT-ATCG
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1264316 22 -   2937107 CTCT--A---------------------------CAAC-TC---ACA-CT-GA-ATCA
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183437345 16 + 183742232 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1503 16 +     20448 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Papio_cynocephalus.k141_4307930                        I 93 C 0
s Papio_hamadryas.Contig39                                20558308 16 +  20919399 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Papio_hamadryas.Contig39                               I 279 T 279
s Papio_kindae.k141_1936966                                    246 16 +     41871 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Papio_kindae.k141_1936966                              I 93 C 0
s Papio_papio.k141_802527                                     3532 16 +     27711 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Papio_papio.k141_802527                                I 114 C 0
s Papio_ursinus.k141_3428135                                  3431 16 +      9205 CTGT--G---------------------------TAGG-TG---A---------ATCA
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8826 22 -     78924 TTCT--A---------------------------CCAA-TT---ATG-CT-GA-ATCG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            4629 22 +     13100 CTCT--G---------------------------TCAA-TG---CTG-TT-GA-ATCG
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             2997 22 +     25941 CTCT--G---------------------------TCAA-TG---CTG-TT-GA-ATCG
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25803 15 -     29689 -------------------------------------AATA---ATG-CT-GA-ACTG
i Petromus_typicus.PetTyp_scaffold_42190                 I 7 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25312  4 +     32600 TGCT------------------------------------------------------
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 T 22
s Phocoena_phocoena.PhoPho_flattened_line_24159               8438 22 +     63832 CTCT--A---------------------------TAAA-TT---ACG-CC-GA-ATCA
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38287 16 +     62158 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33014 16 +     89929 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34430 16 +     51399 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290651 16 -  14605196 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              390 22 +     22620 ATCT--A---------------------------TAAA-TT---ACA-CA-GA-ATCC
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34144 22 +     35617 CTCT--A---------------------------TAAG-TT---ATG-CT-GA-ATCA
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189125499 16 + 189387572 CTCT--A---------------------------TAAA-TG---A---------ATCA
i Pongo_abelii.CM009266.2                                T 206 C 0
s Pongo_pygmaeus.ctg66                                     9565309  9 +   9816681 CTCT--A---------------------------TAAG--------------------
i Pongo_pygmaeus.ctg66                                   I 274 T 267
s Presbytis_comata.k141_677006                               67931 16 -     81375 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9758 16 +     10147 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9952 22 -     22811 CTCT--G---------------------------TGAA-GG---A-C-CT-TACATTG
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986331 17 +   2598838 ----------------------------------TAAA-TA---GTG-CT-GG-ATTG
i Propithecus_coquerelli.NW_012148875.1                  I 2 C 0
s Propithecus_coronatus.k141_347390                          24620 17 +     38485 ----------------------------------TAAA-TG---GTG-CT-GG-ATTG
i Propithecus_coronatus.k141_347390                      I 2 C 0
s Propithecus_diadema.k141_357118                              781 17 +      4256 ----------------------------------TAAA-TG---GTG-CT-GG-ATTG
i Propithecus_diadema.k141_357118                        I 2 C 0
s Propithecus_edwardsi.k141_1176054                          22139 17 +     35766 ----------------------------------TAAA-TG---GTG-CT-GG-ATTG
i Propithecus_edwardsi.k141_1176054                      I 2 C 0
s Propithecus_perrieri.k141_1200571                            322 17 -     24134 ----------------------------------TAAA-TG---GTG-CT-GG-ATTG
i Propithecus_perrieri.k141_1200571                      I 2 C 0
s Propithecus_tattersalli.k141_790011                        24134 17 -     67325 ----------------------------------TAAA-TG---GTG-CT-GG-ATTG
i Propithecus_tattersalli.k141_790011                    I 2 C 0
s Propithecus_verreauxi.k141_956661                            379 17 -      6182 ----------------------------------TAAA-TG---GTG-CT-GG-ATTG
i Propithecus_verreauxi.k141_956661                      I 2 C 0
s Pteronotus_parnellii.KE909381.1                            11158 22 -     21811 CTCC--A---------------------------TCAA-TT---ACA-CA-GC-ATCA
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36627 22 +     42204 CTCC--A---------------------------CAAA-TT---ATG-CT-GA-ATCG
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973635 21 +  28871421 CTCT--A---------------------------TAAA-TT---A-C-CA-GA-AGCT
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1572 21 -      8028 CTCT--A---------------------------TAAA-TT---A-C-CA-GA-AGCT
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20270258 22 -  38429054 CTCT--A---------------------------CTAA-TT---ATG-CT-GA-ATTG
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                              9760 16 -     91421 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603894 16 +   7812017 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9733 16 -     72585 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4857 16 +     55207 -----------------------------------AAC-TC---ACA-CT-GA-ATCA
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 5 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        366869 22 -   3329780 CTCT--A---------------------------CAAA-TT---ACa-ca-ga-atca
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             1146 16 -     11128 CTGT--A---------------------------TAGA-TG---G---------ATCA
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230523 16 - 195417433 CTGT--A---------------------------TAGA-TG---G---------ATCA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7666231 16 +   7961872 CTGT--A---------------------------TAGA-TG---G---------ATCA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84621 21 -     96226 CTCT--A---------------------------TAAA-TT---A-C-CA-GA-AGCA
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3504 22 +      4321 CTCT--A---------------------------CAAC-TC---ACA-CT-GA-ATCA
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151349 10 -    313613 CTCT--A---------------------------GAAA-T------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          14275 16 -     19888 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21480 16 +     39453 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2004 16 +     27826 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1526 16 -     19483 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1588 16 +      7198 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9848 16 +     15514 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187641 22 -    191337 CTCC--A---------------------------TAAA-GT---ATG-CT-GA-ATAG
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13646980 14 -  18376816 AACCTCA---------------------------TACA-TT---A-------------
i Sorex_araneus.JH798187.1                               I 1 I 3
s Spermophilus_dauricus.KZ294078.1                         1948188 14 -   3870691 -------------------------------------A-TG---ATG-CT-ga-atga
i Spermophilus_dauricus.KZ294078.1                       I 8 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27169 22 +     97271 CTCT--A---------------------------CGAA-TT---ATG-CT-GA-ACCG
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14176 22 -    196729 CTCT--A---------------------------CTAA-TT---ACG-CT-GA-GTCA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   62882423  7 -  69701581 GTCT--A---------------------------CA----------------------
i Sus_scrofa.CM000828.4                                  C 0 I 2
s Symphalangus_syndactylus.tarseq_199                      1087824 10 -   1523678 CTCT--A---------------------------CAAA-T------------------
i Symphalangus_syndactylus.tarseq_199                    T 207 I 212
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6773 22 +     41958 CTCT--A---------------------------TAAA-TT---ACG-C--AACATCA
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69418 22 +    116680 CATG--A---------------------------TAAT-TG---ATA-CT-GG-ATCA
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115156 22 -    156842 CTCT--A---------------------------TGAA-TT---ACA-CT-GA-ATCA
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383611 22 +    539355 CTCT--A---------------------------TAAA-TT---ACA-CT-GA-ATCA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10605 22 +     70052 TTCA--A---------------------------CAAA-TG---ATG-CC-GA-ATGG
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               14910 22 +     25099 TTCA--A---------------------------CAAA-TG---ATG-CC-GA-ATGG
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422854 16 + 186847797 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103144 15 +    114563 -------------------------------------AATA---ATA-CT-CA-ACTG
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 7 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   1806 22 +      8208 CATG--G---------------------------TAAA-CG---ATG-CT-GA-ATCA
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78914 22 +    610378 CTCC--A---------------------------TCAA-TT---ACA-CA-GC-ATCA
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          5585 16 -     20410 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9777 16 +     15221 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5685 16 +     19930 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2112 16 -     19997 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42231 16 -     60166 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9703 16 -     27529 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9643 16 -     18194 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3379 16 -     21137 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2081 16 -     10723 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1234 16 +      9834 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19552 16 +     32220 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933649 16 +   6242583 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2894 16 +     20839 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    632 11 -      1748 --------------------------------------------ACA-CT-GA-ATCA
i Tragulus_javanicus.TraJav_scaffold_140459              I 2 C 0
s Tupaia_chinensis.KB320699.1                              2149568 22 +   4065304 CTCC--A---------------------------TGAA-TG---ACG-CT-GA-ACTG
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     3169 12 -     10553 ----------------------------------------G---ACG-CT-GA-ACTG
i Tupaia_tana.TupTan_flattened_line_97126                I 9 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737638 22 +  33153633 CTCT--A---------------------------TAAA-TT---ATG-CC-AA-ATCA
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_97021                    1869 22 -      4736 CACA--C---------------------------GCAA-TT---ATG-CT-GA-ATGA
i Uropsilus_gracilis.UroGra_scaffold_97021               C 0 C 0
s Ursus_maritimus.KK499267.1                               4846870 22 -   5085361 CTCT--A---------------------------CAAA-TT---ATG-CT-GA-ATAG
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368342 22 -   5488506 CACC--G---------------------------TAAC-TT---ATG-CC-AA-ATCA
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7347 22 -     43706 CTCT--A---------------------------CAAA-TT---ATG-CT-CA-ATCG
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19683 14 -     24430 -------------------------------------A-TG---ATG-CC-AA-AGTG
i Xerus_inauris.XerIna_scaffold_48378                    I 8 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1795 22 +      2932 CTCT--A---------------------------CAAA-AA---ATG-CT-GA-ATCG
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9960 14 +     63895 -------------------------------------A-TC---ATG-CC-AA-ATTG
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 8 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11330 22 +     12536 CTCT--A---------------------------TAAA-TT---ATT-CC-GA-ATCA
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    15418  9 -    145209 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                        808 18 +     62944 CAGGAAACA-GAAT-------GATTC
s Acinonyx_jubatus.LLWD01001279.1                           823266 18 -   1699592 AATGAAATG-GAAT-------TGCCG
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506957 18 -  29979442 aatgaaatg-aaat-------tgctA
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             75181 18 -    347723 GATGAAATG-AAAT-------TGCTA
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64960 15 -     89534 AGTGGGGTA-GAAT-------TA---
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9281 18 -     52922 CATGAAATA-GAAT-------GGTTC
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9208 18 -     28001 CATGAAACA-GAAT-------GGTTC
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9334 18 -      9772 CATGAAATA-GAAT-------GGTTC
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            491 18 -     12518 CATGAAATA-GAAT-------GGTTC
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675131 18 -   2318259 AATAAAGTG-GAAT-------TGTTA
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183080 18 +    412891 CATGAAATA-GACT-------TGTTA
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97583 18 -    100397 AATAAAACA-GAAT-------TGTTA
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7240 15 +     20879 AGCAAAATG-GAAT-------CA---
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14418 18 +     17124 AATAAAATA-GAAT-------TGTTA
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2432 18 +     43469 CATGAAGTA-GAAT-------TGTTA
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  49277 18 -     92717 AATGAAATA-GAAT-------TGCTA
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              49902 18 +     85213 AATGAAATA-GAAT-------TGCTA
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191516 18 +  23207421 AATGAAATG-GAAT-------TGTTA
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         1982 18 -     18090 AATGAAATG-GAAT-------TGTTA
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26053 18 +     34529 AATAAAGTG-GAAT-------TGTTA
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    199092 18 -    288883 AATAAAATG-GAAT-------TGTTA
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20272297 18 +  48749331 AATAAAATG-GAAT-------TGTTA
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1124857 18 -   1948126 AATAAAATG-GAAT-------TGTTA
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18082935 18 +  45695690 AATAAAATG-GAAT-------TGTTA
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2818424 18 +   4408762 AATAAAATG-GAAT-------TGTTA
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998875 18 -  17673402 AATGAAGTG-GAGT-------TGTTA
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331339 18 -   7040546 AATGAAGTG-GAGT-------TGTTA
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399615 18 -   1652518 AATGAAGTG-GAGT-------TGTTA
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795745 18 -  60362399 AATGAAATT-AAAT-------TGCTA
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181802 18 -    185531 AATGAAATT-AAAT-------TGCTA
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031189 18 -   9314153 AATGAAATT-AAAT-------TGCTA
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955453 18 -  59632846 AATGAAATT-AAAT-------TGCTA
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496754 18 +  63665305 AATGAAATT-AAAT-------TGCTA
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18829249 18 +  46296322 AATCAAGTG-GAAT-------TGTTA
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18059969 18 -  44709034 AATCAAGTG-GAAT-------TGTTA
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           141012 18 -    496798 aatgaaata-taat-------tgtTG
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2850 18 -     11696 AATGAAATA-GAAT-------TGTTA
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133616 15 +    179628 AATGCAATG-GAAT-------TG---
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89223 18 +    217609 ACTGGAATG-GAAT-------TGTTG
i Catagonus_wagneri.CatWag_scaffold_2839                 I 41 C 0
s Cavia_aperea.AVPZ01000300.1                             18347436 20 -  23392119 AATGAGATA-GAATCACT-A-TG---
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18359696 20 -  23407841 AATGAGATA-GAATCACT-A-TG---
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98571 20 +    143979 AATGAGATA-GAATCATT-A-TG---
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         4928 18 -      8605 AATGAAATA-TAAT-------TGTTG
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227848 18 +  27778364 aatgaaata-gaat-------tatta
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2566 18 -      3715 AATGAAATA-GAAT-------TATTA
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470252 18 +   4669795 CATGAAATA-GAAT-------GGTTC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8801 18 -     19203 CATGAAATA-GAAT-------GGTTC
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3220 18 +      8260 CATGAAATA-GAAT-------GGTTC
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3450 18 +     27781 CATGAAATA-GAAT-------GGTTC
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3596 18 -     20310 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6580 18 +     29689 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             933 18 +      9989 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9268 18 -     27936 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9287 18 -     11289 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811663 18 +  39242232 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217354 18 -  21565898 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34474 18 -     53127 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1766 18 +      7159 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9279 18 -     27947 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9255 18 +     17596 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39749 18 -     41420 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4770 18 -      6351 GATGCAATG-AAAT-------TGCTG
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16695 18 -     52598 AATGAAACA-GAAT-------TGATA
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12044 18 +     57038 AATGAAATA-GAAT-------TGATA
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1248469 17 +   2543920 AATGAAATA-GAATGA-T----A---
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18423218 18 -  18827391 CATGAAACA-GAAT-------GGTTC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9661 18 -     50209 CATGAAACA-GAAT-------GGTTC
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416666 18 + 135778131 CATGAAATA-GAAT-------GGTTC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15127 18 +     19366 AATGGAATA-GAAT-------TGCTA
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170226 18 +    839153 aatggaata-gaat-------tgctA
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1905195 18 +   2368649 CATGAAATA-GAGT-------GGCCC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944867 16 + 200372422 CATGAAATA-G--T-------GGCTC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31734 18 +     84244 CATGAAATA-GAGT-------GGCCC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545957 18 -  53390261 AATGAAATG-GAAT-------TGCTG
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10469 15 -     20389 AGTGAAATG-AAAT-------TG---
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_109268              7529 13 +      9948 ---AAAGTA-TC---------TATGA
i Crocidura_indochinensis.CroInd_scaffold_109268         I 56 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24211 18 -     87169 AATGAAATG-GAAT-------TCCTA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2821 20 +      5455 AATGAAACA-GAATCA-TGA-TG---
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1204 20 +      3576 AATGAAATA-GAATCATT-A-CA---
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            61040 18 +   2246927 aatggaata-aaat-------tgctA
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532865 18 -  12879189 AATGAAAAA-GAAT-------TGTTA
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811152 18 +  35494412 AATGAAATG-GAAT-------TGTTA
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8627881 18 +  20541912 AATGAAATA-GAAT-------TGTTG
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669381 18 +   1390856 AATGAAATA-GAAT-------TATTA
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2456 18 +    198055 AATGAAATA-GAAT-------TACTA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34247 17 +     67921 AATGAAATA-GAATCA-T----G---
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18895777 15 +  37912305 GATGGAATG-GAAC-------TA---
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  11987 15 +     14536 GATGGAATG-GAAC-------TA---
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31461 20 -     42551 AATGAAATG-GAATCATT-A-CA---
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE759718.1                                   7387 18 +     11740 AATGAAATT-GAAG-------TGGTA
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310253 18 +    607251 AGTAAAATG-GAAC-------TGTTA
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1088976 18 +  10337057 AATGCAATG-GAAT-------TGCTG
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16325743 18 -  41312741 AATGAAATG-AAAC-------TGCTA
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144038 18 -  14770903 AATGAAATA-GAAT-------TGTTA
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279723 18 +   4378816 AATGGAATG-GAAT-------TGTTA
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527544 18 -  39960074 AATGAAATG-GAAT-------TGTTA
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29559 18 +    498745 AATGAAATG-GAAT-------TGTTA
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3325313 17 -   7059049 -ACAAAGTA-CTAT-------GGTCA
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21199897 18 -  21539334 CATGAAACA-GAAT-------GGTTC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10828 18 +    133382 AATGAAATG-GAAT-------TGTTA
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24765 18 -     44125 AATGAAATG-GAAT-------TGTTA
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.AANG03299807.1                                   388 18 -       507 AATGAAATG-GAAT-------TGCCA
i Felis_catus.AANG03299807.1                             C 0 C 0
s Felis_catus_fca126.CM031415.1                           20191966 18 + 205367284 AATGAAATG-GAAT-------TGCCA
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  5491 18 -     36744 AATGAAATG-GAAT-------TGCCA
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             848471 20 +   3816255 AATGGAATG-GAATCA-T-CGTA---
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galagoides_demidoff.k141_31856                              3181 18 -      3432 acaaaaata-gagc-------atatc
i Galagoides_demidoff.k141_31856                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25435 18 +     26054 AATGAAATA-GAAT-------TATTA
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30325 15 +     49224 AATGAAATG-GAAT-------TG---
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_2022027                               1945 18 +      3305 CATGAAACA-GAAT-------GGTTC
i Gorilla_beringei.k141_2022027                          I 560 T 186
s Gorilla_gorilla.CYUI03002401.1                              6238 18 +      7071 catgaaaca-gaat-------ggttc
i Gorilla_gorilla.CYUI03002401.1                         I 630 T 256
s Graphiurus_murinus.GraMur_scaffold_10447                   30053 15 +     78134 GATGAAATG-GAAT-------TA---
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238128 18 +    327341 AATGAAATG-GAAT-------TGCTA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17453 18 +     36099 AATAAAGTG-GAAT-------TGTTA
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20659350 20 +  22651954 AATGAAATT-GAATCATT-A-TA---
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 213 18 +       961 AACAGAATG-GACT-------TGCTG
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112008 18 +    128679 AATGAAATG-GAAT-------TGTTA
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108346 18 +   1711038 AAtgaaatg-gaat-------tgttt
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39787 18 +     43066 AATGAAATG-GAAT-------TGTTT
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    429428 18 +    630532 AATGAAACA-GAAT-------GGTTC
i Hoolock_leuconedys.ctg274                                 I 209 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40593 18 +     55795 AATGAAACT-GAAT-------TGCTA
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19819 20 -    143317 AATGAAATA-GAATCATT-A-TG---
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_307679                               12348 18 -     15490 CATGAAACA-GAAT-------GGTTC
i Hylobates_agilis.k141_307679                           I 211 C 0
s Hylobates_klossii.k141_282416                              54353 18 +     67168 CATGAAACA-GAAT-------GGTTC
i Hylobates_klossii.k141_282416                          I 211 C 0
s Hylobates_pileatus_b.LG02                                     189538005 18 - 191637585 CATGAAACA-GAAT-------GGTTC
i Hylobates_pileatus_b.LG02                                     I 6 C 0
s Hylobates_pileatus_a.tarseq_633                            3330898 18 -  11177569 CATGAAACA-GAAT-------GGTTC
i Hylobates_pileatus_a.tarseq_633                          I 211 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80893 20 +    135385 AATACAATA-GAATCA-TGA-TA---
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514560 15 -   7955117 agcaaaatg-aaat-------ca---
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   18137 18 +     31101 AATGAAATA-GAAT-------TGCCA
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22369 18 +     23964 AATGAAATG-GAAT-------TGTTA
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271340 15 -   9596543 AGTGGGAGA-GAAT-------TG---
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1636 18 -      3359 AATGAAATG-GAAT-------TGTTA
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    12217 18 -     42476 AATGAAATG-GAAT-------TGTTA
i Lasiurus_borealis.LasBor_scaffold_32767                I 22 C 0
s Lepilemur_ankaranensis.k141_596936                          6771 18 -     23766 AATGAAACA-GAAT-------TGCTA
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24718 18 +     45836 AATGAAACA-GAAT-------TGCTA
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31629 18 -     32627 AATGAAACA-GAAT-------TGCTA
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      22773 18 +     54090 AATGAAACA-GAAT-------TGCTA
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3036076 18 +   3914936 aataaaatg-aaat-------tgcta
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             267447 18 -    662738 AATGAAATG-GAAT-------TGTTA
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1431795 18 +   1826925 CATGAAATA-GAAT-------GGTTC
i Lophocebus_aterrimus.ctg367                            I 373 T 373
s Loris_lydekkerianus.k141_2539221                             668 15 +     11245 ---AAAACA-GAAT-------TGTTA
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999504 15 +   6120653 ---AAAACA-GAAT-------TGTTA
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214486 18 -  43346337 AATAGAAGG-GAAT-------TGCTA
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951693 18 -  59628241 AATGAAATT-AAAT-------TGCTA
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               1607 18 +     40492 CATGAAATA-GAAT-------GGTTC
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670867 18 +  60120075 CATGAAATA-GAAT-------GGTTC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7365 18 -     26193 CATGAAATA-GAAT-------GGTTC
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75159 18 -    114318 CATGAAATA-GAAT-------GGTTC
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   878 18 -     23192 CATGAAATA-GAAT-------GGTTC
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10331 18 -     29190 CATGAAATA-GAAT-------GGTTC
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18898 18 +     37952 CATGAAATA-GAAT-------GGTTC
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833986 18 + 187317192 CATGAAATA-GAAT-------GGTTC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452547 18 -  25927173 CATGAAATA-GAAT-------GGTTC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74747 18 +     89720 CATGAAATA-GAAT-------GGTTC
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1744 18 +     20474 CATGAAATA-GAAT-------GGTTC
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1545 18 -     14993 CATGAAATA-GAAT-------GGTTC
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324418 18 -    668171 CATGAAATA-GAAT-------GGTTC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15687 18 -     15935 CATGAAATA-GAAT-------GGTTC
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20484 18 -     45290 CATGAAATA-GAAT-------GGTTC
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87533 18 +     94391 AATGAAATT-GAAG-------TGGTA
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23932039 18 -  24302211 CATGAAATA-GAAA-------GGTTC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346217 18 +    752769 CATGAAATA-GAAA-------GGTTC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15578 18 +    737560 aatgaaatg-aaat-------tgttA
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              46967 18 -    317179 aatgaaatg-aaat-------tgttA
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097410 15 -  40650429 agcaaaatg-aaat-------ca---
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6748 18 -    207569 AATAAAATG-GAAT-------TGTTA
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6207 18 +     13704 AATGAAATG-AAAT-------TGTTA
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3037 18 +     10310 AATGAAATG-GAAT-------TGTAA
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18283297 18 -  93316391 AGTGAAATA-GAAT-------TGCTA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13392 18 -     19307 AATGAAATA-GAAT-------TGTTA
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849066 18 +   8254450 aataaaata-taat-------tgtta
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32942 18 +     64694 AATAAAATA-TAAT-------TGTCA
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3774 18 -     28506 CATGAAATA-GAAT-------GGTTC
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62406 18 -     63350 AATAAAATG-AAAT-------TGCTA
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      4652 17 -     37649 AATGAAA-A-GAAT-------TGCTA
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26542 18 -    437263 AATGAAATG-GAAT-------TGTTA
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137798 18 -    366855 AATGAAAAT-GAAT-------TGTTA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_61429                  27393 18 -     27816 AATAAAATG-GAAT-------TGTTA
i Moschus_moschiferus.MosMos_scaffold_61429              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31329 18 +     37127 AATGAAATA-GAAT-------TGCTA
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5092 18 +     14753 AATGAAATG-GAAT-------TGTTA
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2318 15 +     14296 AATGAAATG-GAAT-------TG---
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               297638 18 -  14710649 AATGAAATG-AAAT-------TGCTA
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                278262 18 -  10118263 AATGAAATG-GAAT-------TGTTA
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585819 18 -   6019432 AATGAAATG-GAAT-------TGTTA
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902028 18 -   4330536 AATGAAATG-GAAT-------TGTTA
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32587 18 +     33610 AATGAAATG-GAAT-------TGTTA
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186078 18 +    196477 ACTGGAATG-AAAT-------TGCTG
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025481 20 -   3037898 AATGGAGTG-GCATCTCT-C-TA---
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                                9787 18 +     21681 CATGAAATA-GAAT-------GGTTC
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865498 18 +   7148211 AATGAAATG-GAAT-------TGTTA
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756362 18 +    783361 AATGAAATA-GAAT-------TGCTA
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145954 18 -   9404916 AATGAAATT-AAAT-------TGCTA
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102574472 15 - 196305487 ---AAAACA-GAAT-------TTTTA
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2158 15 +      8486 ---AAAACA-GAAT-------TTTTA
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744899 15 + 199412804 ---AAAACA-GAAT-------TTTTA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355733  9 +   3988456 A------TT-GCTA-------GA---
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              500695 18 -   2017862 aataaaatg-aaac-------tgcTA
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         144625 18 +    630418 GGCAAAATG-GAAC-------GGTTA
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  2781413 18 -  10937097 AATGAAATG-GAAT-------TGTTA
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6811 18 -     18566 AATACAATG-GAAT-------TACTA
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458708 18 -    559221 AATGAAATT-AAAT-------TGCTA
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17584984 18 +  44047080 AATAAAGTG-TAAT-------TGTTA
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173405 18 -    191736 AATAAAGTG-TAAT-------TGTTA
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    36170 18 +     80009 caggaaaca-gaat-------tgtta
i Pan_paniscus.KQ411613.1                                T 2328 C 0
s Pan_troglodytes.CM009242.2                             187570162 18 + 189151597 caggaaaca-gaat-------tgtta
i Pan_troglodytes.CM009242.2                             N 0 N 0
s Panthera_onca.PanOnc_flattened_line_3271                  147113 18 +    230217 AATGAAATG-GAAT-------TGCGA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                259822 18 +  18783137 AATGAAATG-GAAT-------TGCGA
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4716969 18 -   8748460 AATGAAATG-GAAT-------TGCGA
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1264338 18 -   2937107 AATAAAGTG-GAAT-------TGTTA
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183437361 18 + 183742232 CATGAAATA-GAAT-------GGTTC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1519 18 +     20448 CATGAAATA-GAAT-------GGTTC
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20558045 18 +  20919399 CATGAAATA-GAAT-------GGTTC
i Papio_hamadryas.Contig39                               T 279 C 0
s Papio_kindae.k141_1936966                                    262 18 +     41871 CATGAAATA-GAAT-------GGTTC
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     3548 18 +     27711 CATGAAATA-GAAT-------GGTTC
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  3447 18 +      9205 CATGAAATA-GAAT-------GGTTC
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8848 18 -     78924 AATGAAACG-AAAT-------TGGTA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            4651 18 +     13100 AATAAAACA-GAAT-------TGCTA
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             3019 18 +     25941 AATAAAACA-GAAT-------TGCTA
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25818 20 -     29689 AATAAAATA-GAATCATT-A-TA---
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8460 18 +     63832 AATGAAATG-GAAT-------TGTTA
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38303 18 +     62158 CATGAAATA-GAAT-------GGCTC
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33030 18 +     89929 CATGAAATA-GAAT-------GGCTC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34446 18 +     51399 CATGAAATA-GAAT-------GGCTC
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290667 18 -  14605196 CATGAAATA-GAAT-------GGCTC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              412 18 +     22620 AATGAAATG-GAAT-------TGTTA
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34166 18 +     35617 AATGAAATG-GAAT-------TGTTA
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189125515 18 + 189387572 CATGAAACA-GAAT-------GGTTC
i Pongo_abelii.CM009266.2                                C 0 I 205
s Pongo_pygmaeus.ctg66                                     9565051 18 +   9816681 CATGAAACG-GAAT-------GGTTC
i Pongo_pygmaeus.ctg66                                   T 267 I 273
s Presbytis_comata.k141_677006                               67947 18 -     81375 CATGAAATA-GAAT-------GGTTC
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9774 18 +     10147 CATGAAATA-GAAT-------GGTTC
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9974 18 -     22811 AACAGAATG-GACT-------TGCTG
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986348 18 +   2598838 AATGAAATA-GAAT-------TGCTA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          24637 18 +     38485 AATGAAATA-GAAT-------TGCTA
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                              798 18 +      4256 AATGAAATA-GAAT-------TGCTA
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22156 18 +     35766 AATGAAATA-GAAT-------TGCTA
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            339 18 -     24134 AATGAAATA-GAAT-------TGCTA
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24151 18 -     67325 AATGAAATA-GAAT-------TGCTA
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            396 18 -      6182 AATGAAATA-GAAT-------TGCTA
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11180 18 -     21811 AATAGAGTA-GAAC-------TGCTA
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36649 18 +     42204 AATGAAATG-AAAT-------TGCTA
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973656 18 +  28871421 AATGAAATT-GAAG-------TGGTA
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1593 18 -      8028 AATGAAATT-GAAG-------TGGTA
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20270280 18 -  38429054 AATGAAATG-GAAT-------TGCCA
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                              9776 18 -     91421 CATGGAATG-GAAT-------GGTTC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603910 18 +   7812017 CATGGAATG-GAAT-------GGTTC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9749 18 -     72585 CATGGAATG-GAAT-------GGTTC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4873 18 +     55207 GGTAAAATG-GAAC-------GGTTA
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        366891 18 -   3329780 aatgaaata-gaat-------tgttA
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             1162 18 -     11128 CATGAAATA-GAAT-------GGTcc
i Rhinopithecus_bieti.k119_217274                        C 0 I 300
s Rhinopithecus_roxellana.NC_044550.1                     91230539 18 - 195417433 CATGAAATA-GAAT-------GGTcc
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 240
s Rhinopithecus_strykeri.ctg102                            7666247 18 +   7961872 CATGAAATA-GAAT-------GGTcc
i Rhinopithecus_strykeri.ctg102                          C 0 I 220
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84642 18 -     96226 AATGAAATT-GAAG-------TGGTA
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3526 18 +      4321 AATAAAGTG-GAAT-------TGTTA
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 C 0
s Semnopithecus_entellus.k141_11662                          14291 18 -     19888 CGTGAAATA-GAAT-------GGTTC
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21496 18 +     39453 CGTGAAATA-GAAT-------GGTTC
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2020 18 +     27826 CGTGAAATA-GAAT-------GGTTC
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1542 18 -     19483 CGTGAAATA-GAAT-------GGTTC
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1604 18 +      7198 CGTGAAATA-GAAT-------GGTTC
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9864 18 +     15514 CGTGAAATA-GAAT-------GGTTC
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187663 18 -    191337 GATGAAATT-GAAA-------AGTCA
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13646997 14 -  18376816 ---AAAGGAGTT---------TATTA
i Sorex_araneus.JH798187.1                               I 3 C 0
s Spermophilus_dauricus.KZ294078.1                         1948202 15 -   3870691 agcaaaatg-aaat-------ca---
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27191 18 +     97271 AATGAAATG-AAAT-------CAGTA
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14198 18 -    196729 AATGAAATG-GGAT-------TGCTA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   62882432 18 -  69701581 AATGAAATG-GAAT-------TTTGA
i Sus_scrofa.CM000828.4                                  I 2 C 0
s Symphalangus_syndactylus.tarseq_199                      1088046 18 -   1523678 CATGAAACA-GAAT-------GGTTC
i Symphalangus_syndactylus.tarseq_199                    I 212 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6795 18 +     41958 AATGAAAAG-GAAT-------TGTTA
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69440 18 +    116680 ACTGGAATG-AAAT-------TGCTA
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115178 18 -    156842 AATGAAATG-GAAT-------TGTTA
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383633 18 +    539355 AATGAAATG-GAAT-------TGTTG
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10627 18 +     70052 AATGAAATA-TAAT-------TGTTG
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               14932 18 +     25099 AATGAAATA-TAAT-------TGTTG
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422870 18 + 186847797 CATGAAATA-GAAT-------GGTTC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103159 20 +    114563 AATGAAATA-GAATCATT-A-TA---
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   1828 18 +      8208 AATGGAATA-AAAT-------GGCTG
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78936 18 +    610378 CATGAAATA-GAAT-------TGTTA
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          5601 18 -     20410 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9793 18 +     15221 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5701 18 +     19930 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2128 18 -     19997 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42247 18 -     60166 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9719 18 -     27529 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9659 18 -     18194 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3395 18 -     21137 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2097 18 -     10723 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1250 18 +      9834 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19568 18 +     32220 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933665 18 +   6242583 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2910 18 +     20839 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    643 18 -      1748 GATGAAATG-AAAT-------TGTTA
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 C 0
s Tupaia_chinensis.KB320699.1                              2149590 18 +   4065304 AATGAAATG-GAAT-------GGCTA
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     3181 18 -     10553 AGTGATATG-GAAT-------TGCTA
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737660 18 +  33153633 AATGAAATG-GAAC-------TGTTA
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_97021                    1891 18 -      4736 AATGAAATG-GAAA-------TGCTA
i Uropsilus_gracilis.UroGra_scaffold_97021               C 0 C 0
s Ursus_maritimus.KK499267.1                               4846892 18 -   5085361 AATGAAACG-AAAT-------TGCTA
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368364 18 -   5488506 AATGAAGTG-GAGT-------TACTA
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7369 18 -     43706 AATGAAATT-AAAT-------TGCTA
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19697 15 -     24430 AATAAAATG-GAAC-------CA---
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1817 18 +      2932 AATAAAATG-AAAT-------TGCTA
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9974 15 +     63895 AGAGGGAGG-GAAT-------CA---
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11352 18 +     12536 AATGAACTG-GAAT-------TGTAA
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    151359  0 -    313613 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25316 22 +     32600 T
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    15418  9 -    145209 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                        826 4 +     62944 TAT-----T
s Acinonyx_jubatus.LLWD01001279.1                           823284 1 -   1699592 T--------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 2
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506975 4 -  29979442 CAT-----C
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             75199 4 -    347723 CAT-----T
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64975 7 -     89534 --TAATTTT
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9299 4 -     52922 CAT-----T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9226 4 -     28001 CAT-----T
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9352 4 -      9772 CAT-----T
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            509 4 -     12518 CAT-----T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675149 4 -   2318259 TAT-----T
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183098 4 +    412891 TAT-----T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97601 4 -    100397 TAT-----T
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7255 2 +     20879 --T-----A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14436 4 +     17124 AGT-----G
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2450 4 +     43469 TAT-----T
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  49295 4 -     92717 AAT-----C
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              49920 4 +     85213 AAT-----C
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191534 4 +  23207421 TAT-----T
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2000 4 -     18090 TAT-----T
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26071 4 +     34529 TAT-----T
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    199110 4 -    288883 TAT-----T
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20272315 4 +  48749331 TAT-----T
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1124875 4 -   1948126 TAT-----T
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18082953 4 +  45695690 TAT-----T
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2818442 4 +   4408762 TAT-----T
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998893 4 -  17673402 TGT-----C
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331357 4 -   7040546 TGT-----C
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399633 4 -   1652518 TGT-----C
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795763 4 -  60362399 TAC-----T
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181820 4 -    185531 TAC-----T
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031207 4 -   9314153 TAC-----T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955471 4 -  59632846 TAC-----T
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496772 4 +  63665305 TAC-----T
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18829267 4 +  46296322 TAT-----T
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18059987 4 -  44709034 TAT-----T
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           141030 4 -    496798 AAG-----T
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2868 4 -     11696 TAT-----T
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133631 2 +    179628 --C-----T
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89241 4 +    217609 TAT-----T
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18347456 2 -  23392119 --T-----T
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18359716 2 -  23407841 --T-----T
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98591 2 +    143979 --T-----T
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         4946 4 -      8605 AAT-----T
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227866 4 +  27778364 tat-----t
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2584 4 -      3715 TAT-----T
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470270 4 +   4669795 CGT-----T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8819 4 -     19203 CGT-----T
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3238 4 +      8260 CGT-----T
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3468 4 +     27781 CGT-----T
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3614 4 -     20310 CAT-----T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6598 4 +     29689 CAT-----T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             951 4 +      9989 CAT-----T
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9286 4 -     27936 CAT-----T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9305 4 -     11289 CAT-----T
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811681 4 +  39242232 CAT-----T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217372 4 -  21565898 CAT-----T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34492 4 -     53127 CAT-----T
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1784 4 +      7159 CAT-----T
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9297 4 -     27947 CAT-----T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9273 4 +     17596 CAT-----T
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39767 4 -     41420 CAT-----T
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4788 4 -      6351 CAT-----T
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16713 4 -     52598 AAT-----C
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12062 4 +     57038 AAT-----C
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1248486 2 +   2543920 --T-----T
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18423236 4 -  18827391 CAT-----T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9679 4 -     50209 CAT-----T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416684 4 + 135778131 CAT-----T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15145 4 +     19366 CAT-----T
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170244 4 +    839153 CAT-----T
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1905213 4 +   2368649 CAT-----T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944883 4 + 200372422 CAT-----T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31752 4 +     84244 CAT-----T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545975 4 -  53390261 TAT-----T
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10484 4 -     20389 TAT-----C
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_109268              7542 4 +      9948 CAT-----T
i Crocidura_indochinensis.CroInd_scaffold_109268         C 0 T 17
s Cuniculus_paca.CunPac_flattened_line_231100                 2841 2 +      5455 --T-----G
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1224 2 +      3576 --T-----T
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24229 1 -     87169 T--------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 2
s Dasypus_novemcinctus.JH564415.1                            61058 4 +   2246927 TGT-----T
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532883 4 -  12879189 AAT-----T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811170 4 +  35494412 TAT-----T
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8627899 4 +  20541912 TAT-----T
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669399 4 +   1390856 TAT-----T
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2474 4 +    198055 TAT-----T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34264 2 +     67921 --T-----T
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18895792 2 +  37912305 --T-----T
i Dipodomys_ordii.KN672350.1                             C 0 I 5
s Dipodomys_stephensi.DipSte_scaffold_75855                  12002 2 +     14536 --T-----T
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 I 5
s Dolichotis_patagonum.DolPat_scaffold_30833                 31481 2 -     42551 --T-----T
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE759718.1                                   7405 4 +     11740 CAT-----T
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310271 4 +    607251 TAT-----T
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1088994 4 +  10337057 CAT-----T
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16325761 4 -  41312741 CAT-----T
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144056 4 -  14770903 TAT-----C
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279741 4 +   4378816 TAT-----G
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527562 4 -  39960074 TAT-----G
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29577 4 +    498745 TAT-----G
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3325330 4 -   7059049 TAT-----C
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21199915 4 -  21539334 CAT-----T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10846 4 +    133382 CAT-----T
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24783 4 -     44125 TAT-----T
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Fukomys_damarensis.KN121974.1                             848491 2 +   3816255 --C-----T
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Felis_catus.AANG03299807.1                                   406 1 -       507 T--------
i Felis_catus.AANG03299807.1                             C 0 I 2
s Felis_catus_fca126.CM031415.1                           20191984 1 + 205367284 T--------
i Felis_catus_fca126.CM031415.1                          C 0 I 2
s Felis_nigripes.FelNig_flattened_line_20823                  5509 1 -     36744 T--------
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 2
s Galagoides_demidoff.k141_31856                              3199 4 -      3432 aac-----a
i Galagoides_demidoff.k141_31856                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25453 4 +     26054 TAT-----T
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30340 2 +     49224 --T-----T
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              10404 4 -     32273 CAT-----T
i Gorilla_beringei.k141_3596273                          I 24 I 140
s Gorilla_gorilla.LT578341.1                             186332554 4 + 186649187 CAT-----T
i Gorilla_gorilla.LT578341.1                             T 106 I 140
s Graphiurus_murinus.GraMur_scaffold_10447                   30068 2 +     78134 --T-----T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238146 1 +    327341 T--------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 2
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17471 4 +     36099 TAT-----T
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20659370 2 +  22651954 --T-----T
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 231 4 +       961 TAT-----C
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112026 4 +    128679 TAT-----T
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108364 4 +   1711038 tat-----c
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39805 4 +     43066 TAT-----C
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    429446 4 +    630532 CAT-----T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19839 2 -    143317 --T-----T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40611 1 +     55795 T--------
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 2
s Hylobates_agilis.k141_307679                               12366 4 -     15490 CAT-----T
i Hylobates_agilis.k141_307679                           C 0 T 205
s Hylobates_klossii.k141_282416                              54371 4 +     67168 CAT-----T
i Hylobates_klossii.k141_282416                          C 0 T 205
s Hylobates_pileatus_b.LG02                                     189538023 4 - 191637585 CAT-----T
i Hylobates_pileatus_b.LG02                                     C 0 T 205
s Hylobates_pileatus_a.tarseq_633                            3330916 4 -  11177569 CAT-----T
i Hylobates_pileatus_a.tarseq_633                          C 0 T 205
s Hystrix_cristata.HysCri_scaffold_5660                      80913 2 +    135385 --C-----T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514575 2 -   7955117 --t-----a
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   18155 4 +     31101 AAT-----C
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22387 4 +     23964 TAT-----T
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271355 7 -   9596543 --TGATTTT
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1654 4 -      3359 TAT-----T
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    12235 4 -     42476 TAT-----T
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6789 4 -     23766 AAT-----C
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24736 4 +     45836 AAT-----C
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31647 4 -     32627 AAT-----C
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      22791 4 +     54090 AAT-----C
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3036094 4 +   3914936 CAT-----T
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             267465 4 -    662738 TAT-----T
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1431440 4 +   1826925 CGT-----T
i Lophocebus_aterrimus.ctg367                            T 373 C 0
s Loris_lydekkerianus.k141_2539221                             683 4 +     11245 AGT-----G
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999519 4 +   6120653 AGT-----G
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214504 4 -  43346337 TAT-----C
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951711 4 -  59628241 TAC-----T
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               1625 4 +     40492 CGT-----T
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670885 4 +  60120075 CGT-----T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7383 4 -     26193 CGT-----T
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75177 4 -    114318 CGT-----T
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   896 4 -     23192 CGT-----T
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10349 4 -     29190 TGT-----T
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18916 4 +     37952 CGT-----T
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834004 4 + 187317192 CGT-----T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452565 4 -  25927173 CGT-----T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74765 4 +     89720 CGT-----T
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1762 4 +     20474 CGT-----T
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1563 4 -     14993 CGT-----T
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324436 4 -    668171 CGT-----T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15705 4 -     15935 CGT-----T
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20502 4 -     45290 CGT-----T
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87551 4 +     94391 TAT-----T
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23932057 4 -  24302211 CGT-----T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346235 4 +    752769 CGT-----T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15596 4 +    737560 TAT-----T
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              46985 4 -    317179 TAT-----T
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097425 2 -  40650429 --t-----a
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6766 4 -    207569 TAT-----C
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6225 4 +     13704 CAT-----T
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3055 4 +     10310 TAT-----T
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18283315 4 -  93316391 AAT-----C
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13410 4 -     19307 CAC-----T
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849084 4 +   8254450 tat-----t
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32960 4 +     64694 TAT-----T
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3792 4 -     28506 CAT-----T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62424 4 -     63350 CAT-----T
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      4669 4 -     37649 AAT-----C
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26560 4 -    437263 TAT-----T
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137816 4 -    366855 TAT-----C
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_61429                  27411 4 -     27816 TAT-----T
i Moschus_moschiferus.MosMos_scaffold_61429              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31347 1 +     37127 T--------
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 2
s Murina_feae.MurFea_scaffold_85699                           5110 4 +     14753 TAT-----T
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2333 2 +     14296 --T-----T
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               297656 4 -  14710649 CAT-----T
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                278280 4 -  10118263 TAT-----T
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585837 4 -   6019432 TAT-----T
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902046 4 -   4330536 TAT-----T
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32605 4 +     33610 TAT-----T
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186096 4 +    196477 TAT-----T
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025501 2 -   3037898 --T-----T
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                                9805 4 +     21681 CAT-----T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865516 4 +   7148211 TAT-----T
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756380 4 +    783361 TAT-----T
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145972 4 -   9404916 TAC-----T
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102574487 4 - 196305487 AGT-----G
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2173 4 +      8486 AGT-----G
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744914 4 + 199412804 AGT-----G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355742 2 +   3988456 --T-----T
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              500713 4 -   2017862 CAT-----T
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         144643 4 +    630418 TAT-----T
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  2781431 4 -  10937097 TAT-----T
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6829 4 -     18566 TAT-----T
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458726 4 -    559221 TAC-----T
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17585002 4 +  44047080 TAT-----T
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173423 4 -    191736 TAT-----T
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    36188 4 +     80009 cat-----t
i Pan_paniscus.KQ411613.1                                C 0 I 2335
s Pan_troglodytes.CM009242.2                             189137348 4 + 189151597 cat-----t
i Pan_troglodytes.CM009242.2                             N 0 I 223
s Panthera_onca.PanOnc_flattened_line_3271                  147131 1 +    230217 T--------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 2
s Panthera_pardus.KV860321.1                                259840 1 +  18783137 T--------
i Panthera_pardus.KV860321.1                             C 0 I 2
s Panthera_tigris.KE722367.1                               4716987 1 -   8748460 T--------
i Panthera_tigris.KE722367.1                             C 0 I 2
s Pantholops_hodgsonii.KE114653.1                          1264356 4 -   2937107 TAT-----T
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183437379 4 + 183742232 CGT-----T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1537 4 +     20448 CGT-----T
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20558063 4 +  20919399 CGT-----T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                    280 4 +     41871 CGT-----T
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     3566 4 +     27711 CGT-----T
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  3465 4 +      9205 CGT-----T
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8866 1 -     78924 T--------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 2
s Perodicticus_ibeanus.k141_855320                            4669 4 +     13100 AGT-----G
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             3037 4 +     25941 AGT-----G
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25838 2 -     29689 --T-----T
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8478 4 +     63832 TAT-----T
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38321 4 +     62158 CAT-----T
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33048 4 +     89929 CAT-----T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34464 4 +     51399 CAT-----T
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290685 4 -  14605196 CAT-----T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              430 4 +     22620 TAT-----T
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34184 4 +     35617 TAT-----T
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189125738 4 + 189387572 CAT-----T
i Pongo_abelii.CM009266.2                                I 205 C 0
s Pongo_pygmaeus.ctg66                                     9565342 4 +   9816681 CAT-----T
i Pongo_pygmaeus.ctg66                                   I 273 C 0
s Presbytis_comata.k141_677006                               67965 4 -     81375 CAT-----T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9792 4 +     10147 CAT-----T
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9992 4 -     22811 TAT-----C
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986366 4 +   2598838 AAT-----C
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          24655 4 +     38485 AAT-----C
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                              816 4 +      4256 AAT-----C
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22174 4 +     35766 AAT-----C
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            357 4 -     24134 AAT-----C
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24169 4 -     67325 AAT-----C
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            414 4 -      6182 AAT-----C
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11198 4 -     21811 CAT-----T
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36667 4 +     42204 CAT-----T
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973674 4 +  28871421 TAT-----T
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1611 4 -      8028 TAT-----T
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20270298 1 -  38429054 T--------
i Puma_concolor.QAVW01001104.1                           C 0 I 2
s Pygathrix_cinerea.k141_1153803                              9794 4 -     91421 CAT-----T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603928 4 +   7812017 CAT-----T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9767 4 -     72585 CAT-----T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4891 4 +     55207 TAT-----T
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        366909 4 -   3329780 TAT-----C
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             1480 4 -     11128 cat-----t
i Rhinopithecus_bieti.k119_217274                        I 300 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230797 4 - 195417433 cat-----t
i Rhinopithecus_roxellana.NC_044550.1                    I 240 I 40
s Rhinopithecus_strykeri.ctg102                            7666485 4 +   7961872 cat-----t
i Rhinopithecus_strykeri.ctg102                          I 220 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84660 4 -     96226 TAT-----T
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3544 4 +      4321 TAT-----T
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151359 2 -    313613 --T-----T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          14309 4 -     19888 CAT-----T
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21514 4 +     39453 CAT-----T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2038 4 +     27826 CAT-----T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1560 4 -     19483 CAT-----T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1622 4 +      7198 CAT-----T
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9882 4 +     15514 CAT-----T
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187681 4 -    191337 TAT-----T
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13647011 4 -  18376816 TAT-----C
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1948217 2 -   3870691 --t-----a
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27209 4 +     97271 CAT-----T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14216 1 -    196729 T--------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 2
s Sus_scrofa.CM000828.4                                   62882450 4 -  69701581 CAT-----T
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1088064 4 -   1523678 CAT-----T
i Symphalangus_syndactylus.tarseq_199                    C 0 T 206
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6813 4 +     41958 TAT-----T
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69458 4 +    116680 TAT-----T
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115196 4 -    156842 CAT-----C
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383651 4 +    539355 CAT-----C
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10645 4 +     70052 AAT-----T
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               14950 4 +     25099 AAT-----T
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422888 4 + 186847797 CGT-----T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103179 2 +    114563 --T-----T
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   1846 4 +      8208 CAT-----T
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78954 4 +    610378 CAT-----T
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          5619 4 -     20410 CAT-----T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9811 4 +     15221 CAT-----T
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5719 4 +     19930 CAT-----T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2146 4 -     19997 CAT-----T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42265 4 -     60166 CAT-----T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9737 4 -     27529 CAT-----T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9677 4 -     18194 CAT-----T
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3413 4 -     21137 CAT-----T
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2115 4 -     10723 CAT-----T
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1268 4 +      9834 CAT-----T
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19586 4 +     32220 CAT-----T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933683 4 +   6242583 CAT-----T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2928 4 +     20839 CAT-----T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    661 4 -      1748 TAT-----T
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 C 0
s Tupaia_chinensis.KB320699.1                              2149608 4 +   4065304 TAT-----T
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     3199 4 -     10553 TAT-----T
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737678 4 +  33153633 TAT-----T
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_97021                    1909 4 -      4736 TAT-----T
i Uropsilus_gracilis.UroGra_scaffold_97021               C 0 C 0
s Ursus_maritimus.KK499267.1                               4846910 4 -   5085361 CAT-----C
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368382 4 -   5488506 TGT-----C
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7387 4 -     43706 TAC-----T
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19712 2 -     24430 --T-----A
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1835 4 +      2932 CAT-----T
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9989 7 +     63895 --TAATTTT
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11370 4 +     12536 TAT-----T
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Varecia_variegata.k141_1128296                              7155 0 +     24756 C
e Varecia_rubra.k141_590885                                   7107 0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414 0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25316 22 +     32600 T
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    15418 9 -    145209 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Lemur_catta.scaffold_24                                 15519761 0 -  30322482 C
e Hapalemur_occidentalis.k141_907772                          9234 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402 0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298 0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517 0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                               9432 0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267 0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247 0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321 0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369 0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369 0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184 0 -     25546 C
e Eulemur_collaris.k141_377015                                2154 0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453 0 -     14127 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                        830 14 +     62944 G---T----CACAGAGTAGAA
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506979  5 -  29979442 A---T----CAC---------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             75203  5 -    347723 A---T----CAC---------
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64982  5 -     89534 A---G----CAC---------
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9303 14 -     52922 G---T----CACCGAGTAGAG
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9230 14 -     28001 G---T----CACCGAGTAGAA
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9356 14 -      9772 G---T----CACCGAGTAGAA
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            513 14 -     12518 G---T----CACCGAGTAGAA
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675153  5 -   2318259 A---T----CAC---------
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183102  5 +    412891 A---T----CAC---------
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97605  5 -    100397 A---T----CAC---------
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7257  5 +     20879 A---T----CAC---------
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14440  5 +     17124 G---T----CAC---------
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2454  5 +     43469 A---T----CAC---------
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  49299  5 -     92717 A---T----CAC---------
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              49924  5 +     85213 A---T----CAC---------
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191538  5 +  23207421 A---T----CAT---------
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2004  5 -     18090 A---T----CAT---------
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26075  5 +     34529 A---T----CAC---------
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    199114  5 -    288883 A---T----CAC---------
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20272319  5 +  48749331 A---T----CAC---------
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1124879  5 -   1948126 A---T----CAC---------
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18082957  5 +  45695690 A---T----CAC---------
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2818446  5 +   4408762 A---T----CAC---------
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998897  5 -  17673402 A---T----CAC---------
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331361  5 -   7040546 A---T----CAC---------
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399637  5 -   1652518 A---T----CAC---------
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795767  5 -  60362399 A---A----CAC---------
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181824  5 -    185531 A---A----CAC---------
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031211  5 -   9314153 A---A----CAC---------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955475  5 -  59632846 A---A----CAC---------
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496776  5 +  63665305 A---A----CAC---------
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18829271  5 +  46296322 A---T----CAC---------
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18059991  5 -  44709034 A---T----CAC---------
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           141034  5 -    496798 A---C----CCC---------
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2872  5 -     11696 A---T----CAC---------
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133633  9 +    179628 G---TCTTACAC---------
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89245  5 +    217609 A---T----CAC---------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18347458  5 -  23392119 A---T----TGT---------
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18359718  5 -  23407841 A---T----TGT---------
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98593  5 +    143979 A---T----TAT---------
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         4950  5 -      8605 G---C----CCC---------
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227870  5 +  27778364 a---T----CAC---------
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2588  5 -      3715 A---T----CAC---------
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470274 14 +   4669795 G---C----CACCGAGTAGAA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8823 14 -     19203 G---C----CACCGAGTAGAA
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3242 14 +      8260 G---C----CACCGAGTAGAA
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3472 14 +     27781 G---C----CACCGAGTAGAA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3618 14 -     20310 G---T----CACCGAGTAGAA
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6602 14 +     29689 G---T----CACCGAGTAGAA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             955 14 +      9989 G---T----CACCGAGTAGAA
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9290 14 -     27936 G---T----CACCGAGTAGAA
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9309 14 -     11289 G---T----CACCGAGTAGAA
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811685 14 +  39242232 G---T----CACCGAGTAGAA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217376 14 -  21565898 G---T----CACCGAGTAGAA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34496 14 -     53127 G---T----CACCGAGTAGAA
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1788 14 +      7159 G---T----CACCGAGTAGAA
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9301 14 -     27947 G---T----CATCAAGTAGAA
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9277 14 +     17596 G---T----CACCGAGTAGAA
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39771 14 -     41420 G---T----CACAGAGTAGAA
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4792  3 -      6351 A---T----C-----------
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16717  5 -     52598 A---T----CAC---------
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12066  5 +     57038 A---T----CAC---------
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1248488  5 +   2543920 A---T----CAT---------
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18423240 14 -  18827391 G---T----CACCGAGTAGAA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9683 14 -     50209 G---T----CACCGAGTAGAA
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416688 14 + 135778131 G---T----CACCGAGTAGAA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15149  5 +     19366 A---T----CAC---------
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170248  5 +    839153 A---T----CAC---------
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1905217 14 +   2368649 G---T----CACCGAGTAGAA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944887 14 + 200372422 G---T----CACCGAGTAGAA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31756 14 +     84244 G---T----CACCGAGTAGAA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545979  5 -  53390261 A---T----TAA---------
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10488  5 -     20389 A---T----CAT---------
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_287352               360  5 +      4208 A---T----CAC---------
i Crocidura_indochinensis.CroInd_scaffold_287352         I 18 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2843  5 +      5455 A---T----CAT---------
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1226  5 +      3576 A---T----CCT---------
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            61062  3 +   2246927 A---T----C-----------
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532887  5 -  12879189 A---T----TAC---------
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811174  5 +  35494412 A---T----CAC---------
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8627903  5 +  20541912 A---T----CAC---------
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669403  5 +   1390856 A---T----CAC---------
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2478  5 +    198055 A---T----CAC---------
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34266  5 +     67921 A---T----CAT---------
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18895799  5 +  37912305 A---T----TAT---------
i Dipodomys_ordii.KN672350.1                             I 5 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  12009  5 +     14536 A---T----TAT---------
i Dipodomys_stephensi.DipSte_scaffold_75855              I 5 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31483  5 -     42551 A---T----CAT---------
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE759718.1                                   7409  5 +     11740 T---T----CAT---------
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310275  5 +    607251 A---T----CAC---------
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1088998  5 +  10337057 A---C----CAC---------
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16325765  5 -  41312741 A---A----CAC---------
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144060  5 -  14770903 A---T----CCC---------
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279745  5 +   4378816 A---T----CAC---------
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527566  5 -  39960074 A---T----CAC---------
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29581  5 +    498745 A---T----CAC---------
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3325334  5 -   7059049 A---T----CAT---------
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21199919 14 -  21539334 G---T----CACCGAGTAGAA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10850  5 +    133382 A---T----CAC---------
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24787  5 -     44125 A---T----CAT---------
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Fukomys_damarensis.KN121974.1                             848493  5 +   3816255 G---T----CAT---------
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galagoides_demidoff.k141_31856                              3203  5 -      3432 c---a----ctc---------
i Galagoides_demidoff.k141_31856                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25457  5 +     26054 A---C----CAC---------
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30342  5 +     49224 G---T----CAC---------
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              10548 14 -     32273 G---T----CACCGAGTAGAA
i Gorilla_beringei.k141_3596273                          I 140 C 0
s Gorilla_gorilla.LT578341.1                             186332698 14 + 186649187 G---T----CACCGAGTAGAA
i Gorilla_gorilla.LT578341.1                             I 140 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   30070  5 +     78134 A---T----CAC---------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17475  5 +     36099 A---T----CAC---------
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20659372  5 +  22651954 A---T----CAT---------
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 235  5 +       961 A---T----CAC---------
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112030  5 +    128679 A---T----CAC---------
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108368  5 +   1711038 A---T----CAC---------
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39809  5 +     43066 A---T----CAC---------
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    429450 14 +    630532 G---T----CACCGAGTAGAA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19841  5 -    143317 A---T----CAT---------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_307679                               12165 14 -     15490 G---T----CACCGAGTAGAA
i Hylobates_agilis.k141_307679                           T 205 I 205
s Hylobates_klossii.k141_282416                              54170 14 +     67168 G---T----CACCGAGTAGAA
i Hylobates_klossii.k141_282416                          T 205 I 205
s Hylobates_pileatus_b.LG02                                     189537822 14 - 191637585 G---T----CACCGAGTAGAA
i Hylobates_pileatus_b.LG02                                     T 205 I 205
s Hylobates_pileatus_a.tarseq_633                            3330715 14 -  11177569 G---T----CACCGAGTAGAA
i Hylobates_pileatus_a.tarseq_633                          T 205 I 205
s Hystrix_cristata.HysCri_scaffold_5660                      80915  5 +    135385 A---T----CAT---------
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514577  5 -   7955117 a---t----CAT---------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   18159  5 +     31101 A---T----CAC---------
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22391  5 +     23964 A---T----CAC---------
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271362  5 -   9596543 A---G----CAC---------
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1658  5 -      3359 A---G----CAC---------
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    12239  5 -     42476 A---G----CCT---------
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6793  5 -     23766 A---T----CAC---------
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24740  5 +     45836 A---T----CAC---------
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31651  5 -     32627 A---T----CAC---------
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      22795  5 +     54090 A---T----CAC---------
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3036098  5 +   3914936 A---T----CAC---------
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             267469  5 -    662738 A---T----CAC---------
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1431444 15 +   1826925 G---TC---CACCGAGTAGAA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             687  5 +     11245 A---T----GAC---------
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999523  5 +   6120653 A---T----GAC---------
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214508  5 -  43346337 A---T----CAT---------
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951715  5 -  59628241 A---A----CAC---------
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               1629 14 +     40492 G---T----CACCGAGTAGAA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670889 14 +  60120075 G---T----CACCGAGTAGAA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7387 14 -     26193 G---T----CACCGAGTAGAA
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75181 14 -    114318 G---T----CACCGAGTAGAA
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   900 14 -     23192 G---T----CACCGAGTAGAA
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10353 14 -     29190 G---C----CACCGAGTAGAA
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18920 14 +     37952 G---T----CACCGAGTAGAA
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834008 14 + 187317192 G---T----CACCGAGTAGAA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452569 14 -  25927173 G---T----CACCGAGTAGAA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74769 14 +     89720 G---T----CACCGAGTAGAA
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1766 14 +     20474 G---T----CACCGAGTAGAA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1567 14 -     14993 G---T----CACTGAGTAGAA
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324440 14 -    668171 G---T----CACCGAGTAGAA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15709 14 -     15935 G---T----CACCGAGTAGAA
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20506 14 -     45290 G---T----CACCGAGTAGAA
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87555  5 +     94391 T---T----CAT---------
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23932061 14 -  24302211 G---C----CACCGAGTAGAA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346239 14 +    752769 G---C----CACCGAGTAGAA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15600  5 +    737560 A---C----GAC---------
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              46989  5 -    317179 A---T----CAC---------
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097427  5 -  40650429 a---t----CAT---------
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6770  5 -    207569 A---T----CAT---------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6229  5 +     13704 A---T----CAC---------
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3059  5 +     10310 A---T----CAC---------
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18283319  5 -  93316391 A---T----CAC---------
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13414  5 -     19307 A---T----CAC---------
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849088  5 +   8254450 A---T----CAC---------
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32964  5 +     64694 A---T----CAC---------
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3796 14 -     28506 G---T----CACCGAGTAGAA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62428  5 -     63350 A---T----CAC---------
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      4673  5 -     37649 A---T----CAC---------
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26564  5 -    437263 A---T----CAC---------
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137820  5 -    366855 G---T----TAC---------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_61429                  27415  5 -     27816 A---T----CAC---------
i Moschus_moschiferus.MosMos_scaffold_61429              C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5114  5 +     14753 A---T----TCC---------
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2335  5 +     14296 A---T----CAC---------
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               297660  5 -  14710649 A---T----CAC---------
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                278284  5 -  10118263 A---T----CCC---------
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585841  5 -   6019432 A---T----CCT---------
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902050  5 -   4330536 A---T----CCC---------
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32609  5 +     33610 A---T----CCC---------
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186100  5 +    196477 A---T----CAT---------
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025503  5 -   3037898 A---G----CAC---------
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                                9809 14 +     21681 G---T----CACCGAGTAGAA
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865520  5 +   7148211 A---T----CAC---------
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756384  5 +    783361 G---T----CAC---------
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145976  5 -   9404916 A---A----CAC---------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102574491  5 - 196305487 A---T----CAC---------
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2177  5 +      8486 A---T----CAC---------
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744918  5 + 199412804 A---T----CAC---------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355744  5 +   3988456 A---T----TAC---------
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              500717  5 -   2017862 A---T----CAC---------
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         144647  5 +    630418 A---T----CAC---------
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  2781435  5 -  10937097 A---T----CAC---------
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6833  5 -     18566 G---C----CAC---------
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 I 12
s Otocyon_megalotis.JAEUCK010005147.1                       458730  5 -    559221 A---A----CAC---------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17585006  5 +  44047080 A---T----CAC---------
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173427  5 -    191736 A---T----CAC---------
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    38527 14 +     80009 g---t----caccgagtagaa
i Pan_paniscus.KQ411613.1                                I 2335 C 0
s Pan_troglodytes.NBAG03001836.1                             24368 17 +     51860 gtcat----cactgagtagaa
i Pan_troglodytes.NBAG03001836.1                         n 223 T 17
s Pantholops_hodgsonii.KE114653.1                          1264360  5 -   2937107 A---T----CAC---------
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183437383 14 + 183742232 G---T----CACCGAGTAGAA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1541 14 +     20448 G---T----CACCGAGTAGAA
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20558067 14 +  20919399 G---C----CACCGAGTAGAA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                    284 14 +     41871 G---T----CACCGAGTAGAA
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     3570 14 +     27711 G---T----CACCGAGTAGAA
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  3469 14 +      9205 G---C----CACCGAGTAGAA
i Papio_ursinus.k141_3428135                             C 0 C 0
s Perodicticus_ibeanus.k141_855320                            4673  5 +     13100 G---T----CAC---------
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             3041  5 +     25941 G---T----CAC---------
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25840  5 -     29689 A---T----CAC---------
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8482  5 +     63832 A---T----CAC---------
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38325 14 +     62158 G---T----CACCGAGTAGAA
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33052 14 +     89929 G---T----CACCGAGTAGAA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34468 14 +     51399 G---T----CACCGAGTAGAA
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290689 14 -  14605196 G---T----CACCGAGTAGAA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              434  5 +     22620 A---T----CCC---------
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34188  5 +     35617 A---T----CAC---------
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189125742 14 + 189387572 G---T----CACCGAGCAGAA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9565346 14 +   9816681 G---T----CACCGAGCAGAA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               67969 14 -     81375 G---T----CACCGAGTAGAA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9796 14 +     10147 G---T----CACCGAGTAGAA
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9996  5 -     22811 G---T----CAC---------
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986370  5 +   2598838 A---T----CAC---------
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          24659  5 +     38485 A---T----CAC---------
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                              820  5 +      4256 A---T----CAC---------
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22178  5 +     35766 A---T----CAC---------
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            361  5 -     24134 A---T----CAC---------
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24173  5 -     67325 A---T----CAC---------
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            418  5 -      6182 A---T----CAC---------
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11202  5 -     21811 A---T----CAC---------
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36671  5 +     42204 A---T----CAC---------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973678  5 +  28871421 T---T----CAC---------
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1615  5 -      8028 T---T----CAC---------
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                              9798 14 -     91421 G---T----CACCGAGTAGAA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603932 14 +   7812017 G---T----CACCGAGTAGAA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9771 14 -     72585 G---T----CACCGAGTAGAA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4895  5 +     55207 A---T----CAC---------
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        366913  5 -   3329780 A---T----CAC---------
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             1484 14 -     11128 g---t----caccaagtagaa
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230841 14 - 195417433 g---t----caccgagtagaa
i Rhinopithecus_roxellana.NC_044550.1                    I 40 C 0
s Rhinopithecus_strykeri.ctg102                            7666489 14 +   7961872 g---c----cgccgagtagaa
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84664  5 -     96226 T---T----CAT---------
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3548  5 +      4321 A---T----CAC---------
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151361  5 -    313613 A---T----CAA---------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          14313 14 -     19888 G---T----CACCGAGTAGAA
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21518 14 +     39453 G---T----CACCGAGTAGAA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2042 14 +     27826 G---T----CACCGAGTAGAA
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1564 14 -     19483 G---T----CACCGAGTAGAA
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1626 14 +      7198 G---T----CACCGAGTAGAA
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9886 14 +     15514 G---T----CACCGAGTAGAA
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187685  5 -    191337 A---T----CAC---------
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13647015  5 -  18376816 A---T----CAA---------
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1948219  5 -   3870691 a---t----CAT---------
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27213  5 +     97271 A---T----CAC---------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Sus_scrofa.CM000828.4                                   62882454  5 -  69701581 A---T----CAC---------
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1087862 14 -   1523678 G---T----CACCGAGTAGAA
i Symphalangus_syndactylus.tarseq_199                    T 206 I 206
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6817  5 +     41958 A---T----CAC---------
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69462  5 +    116680 A---T----CAT---------
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115200  5 -    156842 A---T----CAC---------
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383655  5 +    539355 A---T----CAC---------
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10649  5 +     70052 A---A----CCC---------
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               14954  5 +     25099 A---A----CCC---------
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422892 14 + 186847797 G---C----CACCGAGTAGAA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103181  5 +    114563 A---T----CAT---------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   1850  3 +      8208 A---T----C-----------
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78958  5 +    610378 A---C----CAC---------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          5623 11 -     20410 G---T----CACCG---AGAA
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9815 14 +     15221 G---T----CACCGAGTAGAA
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5723 11 +     19930 G---T----CACCG---AGAA
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2150 14 -     19997 G---T----CACCGAGTAGAA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42269 14 -     60166 G---T----CACCGAGTAGAA
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9741 14 -     27529 G---T----CACCGAGTAGAA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9681 14 -     18194 G---T----CACCGAGTAGAA
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3417 14 -     21137 G---T----CACCGAGTAGAA
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2119 14 -     10723 G---T----CACCGAGTAGAA
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1272 14 +      9834 G---T----CACCGAGTAGAA
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19590 14 +     32220 G---T----CACCGAGTAGAA
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933687 14 +   6242583 G---T----CACCGAGTAGAA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2932 14 +     20839 G---T----CACCGAGTAGAA
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    665  5 -      1748 A---T----CAC---------
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 C 0
s Tupaia_chinensis.KB320699.1                              2149612  5 +   4065304 A---C----CAC---------
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     3203  5 -     10553 A---T----CAC---------
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737682  5 +  33153633 A---T----CAC---------
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_97021                    1913  5 -      4736 A---T----CAC---------
i Uropsilus_gracilis.UroGra_scaffold_97021               C 0 C 0
s Ursus_maritimus.KK499267.1                               4846914  5 -   5085361 A---T----CAC---------
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368386  5 -   5488506 A---T----CAC---------
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7391  5 -     43706 A---A----CAC---------
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19714  5 -     24430 A---T----CAT---------
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1839  5 +      2932 A---T----CAC---------
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9996  5 +     63895 A---G----CAC---------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11374  5 +     12536 A---T----CAC---------
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Suricata_suricatta.SurSur_flattened_line_6629              14217  2 -    196729 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Puma_concolor.QAVW01001104.1                            20270299  2 -  38429054 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25316 22 +     32600 T
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8867  2 -     78924 I
e Panthera_tigris.KE722367.1                               4716988  2 -   8748460 I
e Panthera_pardus.KV860321.1                                259841  2 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  147132  2 +    230217 I
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mungos_mungo.MunMun_flattened_line_23663                   31348  2 +     37127 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    15418  9 -    145209 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  40612  2 +     55795 I
e Helogale_parvula.HelPar_flattened_line_2585               238147  2 +    327341 I
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Felis_nigripes.FelNig_flattened_line_20823                  5510  2 -     36744 I
e Felis_catus_fca126.CM031415.1                           20191985  2 + 205367284 I
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             24230  2 -     87169 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           823285  2 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                        844 2 +     62944 CC
s Allenopithecus_nigroviridis.k141_3361533                    9317 2 -     52922 CC
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9244 2 -     28001 CC
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9370 2 -      9772 CC
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            527 2 -     12518 CC
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470288 2 +   4669795 CC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8837 2 -     19203 CC
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3256 2 +      8260 CC
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3486 2 +     27781 CC
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3632 2 -     20310 CC
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6616 2 +     29689 CC
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             969 2 +      9989 CC
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9304 2 -     27936 CC
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9323 2 -     11289 CC
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811699 2 +  39242232 CC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217390 2 -  21565898 CC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34510 2 -     53127 CC
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1802 2 +      7159 CC
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9315 2 -     27947 CC
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9291 2 +     17596 CC
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39785 2 -     41420 CC
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chlorocebus_aethiops.ctg25                              18423254 2 -  18827391 CC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9697 2 -     50209 CC
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416702 2 + 135778131 CC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1905231 2 +   2368649 CC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944901 2 + 200372422 CC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31770 2 +     84244 CC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Erythrocebus_patas.Contig38                             21199933 2 -  21539334 CC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Gorilla_beringei.k141_3596273                              10562 2 -     32273 CC
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186332712 2 + 186649187 CC
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hoolock_leuconedys.ctg274                                    429464 2 +    630532 CC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_307679                               12384 2 -     15490 CC
i Hylobates_agilis.k141_307679                           I 205 C 0
s Hylobates_klossii.k141_282416                              54389 2 +     67168 CC
i Hylobates_klossii.k141_282416                          I 205 C 0
s Hylobates_pileatus_b.LG02                                     189538041 2 - 191637585 CC
i Hylobates_pileatus_b.LG02                                     I 205 C 0
s Hylobates_pileatus_a.tarseq_633                            3330934 2 -  11177569 CC
i Hylobates_pileatus_a.tarseq_633                          I 205 C 0
s Lophocebus_aterrimus.ctg367                              1431459 2 +   1826925 CC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                               1643 2 +     40492 CC
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670903 2 +  60120075 CC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7401 2 -     26193 CC
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75195 2 -    114318 CC
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   914 2 -     23192 CC
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10367 2 -     29190 CC
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18934 2 +     37952 CC
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834022 2 + 187317192 CC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452583 2 -  25927173 CC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74783 2 +     89720 CC
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1780 2 +     20474 CC
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1581 2 -     14993 CC
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324454 2 -    668171 CC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15723 2 -     15935 CC
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20520 2 -     45290 CC
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23932075 2 -  24302211 CC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346253 2 +    752769 CC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3810 2 -     28506 CC
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Nasalis_larvatus.k141_413338                                9823 2 +     21681 CC
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Pan_paniscus.KQ411613.1                                    38541 2 +     80009 cc
i Pan_paniscus.KQ411613.1                                C 0 I 69
s Pan_troglodytes.CM009242.2                             189137575 2 + 189151597 cc
i Pan_troglodytes.CM009242.2                             I 223 C 0
s Papio_anubis.CM001495.2                                183437397 2 + 183742232 CC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1555 2 +     20448 CC
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20558081 2 +  20919399 CC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                    298 2 +     41871 CC
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     3584 2 +     27711 CC
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  3483 2 +      9205 CC
i Papio_ursinus.k141_3428135                             C 0 C 0
s Piliocolobus_badius.k141_1234363                           38339 2 +     62158 CC
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33066 2 +     89929 CC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34482 2 +     51399 CC
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290703 2 -  14605196 CC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189125756 2 + 189387572 CC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9565360 2 +   9816681 CC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               67983 2 -     81375 CC
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9810 2 +     10147 CC
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Pygathrix_cinerea.k141_1153803                              9812 2 -     91421 CC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603946 2 +   7812017 CC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9785 2 -     72585 CC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             1498 2 -     11128 cc
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230855 2 - 195417433 cc
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7666503 2 +   7961872 cc
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Semnopithecus_entellus.k141_11662                          14327 2 -     19888 CC
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21532 2 +     39453 CC
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2056 2 +     27826 CC
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1578 2 -     19483 CC
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1640 2 +      7198 CC
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9900 2 +     15514 CC
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1088082 2 -   1523678 CC
i Symphalangus_syndactylus.tarseq_199                    I 206 C 0
s Theropithecus_gelada.CM009954.1                        186422906 2 + 186847797 CC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          5634 2 -     20410 CC
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9829 2 +     15221 CC
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5734 2 +     19930 CC
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2164 2 -     19997 CC
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42283 2 -     60166 CC
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9755 2 -     27529 CC
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9695 2 -     18194 CC
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3431 2 -     21137 CC
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2133 2 -     10723 CC
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1286 2 +      9834 CC
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19604 2 +     32220 CC
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933701 2 +   6242583 CC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2946 2 +     20839 CC
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Loris_tardigradus.ctg83                                   999528 0 +   6120653 C
e Loris_lydekkerianus.k141_2539221                             692 0 +     11245 C
e Perodicticus_potto.k141_1092580                             3046 0 +     25941 C
e Perodicticus_ibeanus.k141_855320                            4678 0 +     13100 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            11379 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      10001 0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_63728          1844 0 +      2932 C
e Xerus_inauris.XerIna_scaffold_48378                        19719 0 -     24430 C
e Vulpes_lagopus.VulLag_flattened_line_30954                  7396 0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5368391 0 -   5488506 C
e Varecia_variegata.k141_1128296                              7155 0 +     24756 C
e Varecia_rubra.k141_590885                                   7107 0 +     50397 C
e Ursus_maritimus.KK499267.1                               4846919 0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_97021                    1918 0 -      4736 C
e Tursiops_truncatus.MRVK01000835.1                       15737687 0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     3208 0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2149617 0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                    670 0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     78963 0 +    610378 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   1853 0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103186 0 +    114563 C
e Tarsius_wallacei.k141_780063                               14959 0 +     25099 C
e Tarsius_lariang.k141_2201908                               10654 0 +     70052 C
e Tapirus_terrestris.TapTer_scaffold_755                    383660 0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      115205 0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 69467 0 +    116680 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                 6822 0 +     41958 C
e Sus_scrofa.CM000828.4                                   62882459 0 -  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629              14217 2 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             27218 0 +     97271 C
e Spermophilus_dauricus.KZ294078.1                         1948224 0 -   3870691 C
e Sorex_araneus.JH798187.1                                13647020 0 -  18376816 C
e Solenodon_paradoxus.SolPar_flattened_line_5840            187690 0 -    191337 C
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    151366 0 -    313613 C
e Saiga_tatarica.SaiTat_scaffold_373180                       3553 0 +      4321 C
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                84669 0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        366918 0 -   3329780 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4900 0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20270299 2 -  38429054 I
e Pteropus_vampyrus.KN534172.1                                1620 0 -      8028 C
e Pteropus_alecto.KB030862.1                              22973683 0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         36676 0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            11207 0 -     21811 C
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Propithecus_verreauxi.k141_956661                            423 0 -      6182 C
e Propithecus_tattersalli.k141_790011                        24178 0 -     67325 C
e Propithecus_perrieri.k141_1200571                            366 0 -     24134 C
e Propithecus_edwardsi.k141_1176054                          22183 0 +     35766 C
e Propithecus_diadema.k141_357118                              825 0 +      4256 C
e Propithecus_coronatus.k141_347390                          24664 0 +     38485 C
e Propithecus_coquerelli.NW_012148875.1                     986375 0 +   2598838 C
e Prolemur_simus.MPIZ01000396.1                            2592414 0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10001 0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           34193 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              439 0 +     22620 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               8487 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     25845 0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25316 22 +     32600 T
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8867 2 -     78924 I
e Pantholops_hodgsonii.KE114653.1                          1264365 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4716988 2 -   8748460 I
e Panthera_pardus.KV860321.1                                259841 2 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  147132 2 +    230217 I
e Ovis_canadensis.OviCan_scaffold_2572                      173432 0 -    191736 C
e Ovis_aries.CM001607.2                                   17585011 0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       458735 0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               6838 12 -     18566 I
e Orcinus_orca.KB316932.1                                  2781440 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144652 0 +    630418 C
e Odobenus_rosmarus.KB229312.1                              500722 0 -   2017862 C
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1355749 0 +   3988456 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744923 0 + 199412804 C
e Nycticebus_coucang.k141_5327727                             2182 0 +      8486 C
e Nycticebus_bengalensis.LG01                            102574496 0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9145981 0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    756389 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5865525 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.KL204047.1                            2025508 0 -   3037898 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186105 0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        32614 0 +     33610 C
e Myotis_lucifugus.GL429869.1                              3902055 0 -   4330536 C
e Myotis_davidii.KB100139.1                                1585846 0 -   6019432 C
e Myotis_brandtii.KE162005.1                                278289 0 -  10118263 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               297665 0 -  14710649 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              2340 0 +     14296 C
e Murina_feae.MurFea_scaffold_85699                           5119 0 +     14753 C
e Mungos_mungo.MunMun_flattened_line_23663                   31348 2 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_61429                  27420 0 -     27816 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 137825 0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    26569 0 -    437263 C
e Mirza_zaza.k141_952172                                      4678 0 -     37649 C
e Mirounga_angustirostris.MirAng_flattened_line_22144        62433 0 -     63350 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             32969 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849093 0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                13419 0 -     19307 C
e Microgale_talazaci.MicTal_scaffold_6613                    15418 9 -    145209 I
e Microcebus_murinus.CM007674.1                           18283324 0 -  93316391 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3064 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365              6234 0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                         6775 0 -    207569 C
e Marmota_marmota.CZRN01000018.1                          33097432 0 -  40650429 C
e Manis_pentadactyla.KN006162.1                              46994 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              15605 0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 87560 0 +     94391 C
e Lycaon_pictus.CM007581.1                                17951720 0 -  59628241 C
e Loxodonta_africana.GL010049.1                            4214513 0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             267474 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3036103 0 +   3914936 C
e Lepilemur_septentrionalis.k141_185316                      22800 0 +     54090 C
e Lepilemur_ruficaudatus.k141_420445                         31656 0 -     32627 C
e Lepilemur_dorsalis.k141_577674                             24745 0 +     45836 C
e Lepilemur_ankaranensis.k141_596936                          6798 0 -     23766 C
e Lemur_catta.scaffold_24                                 15519761 0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12244 0 -     42476 C
e Kogia_breviceps.KogBre_flattened_line_192630                1663 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8271367 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               22396 0 +     23964 C
e Indri_indri.k141_3655594                                   18164 0 +     31101 C
e Ictidomys_tridecemlineatus.JH393364.1                    7514582 0 -   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                      80920 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19846 0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  40612 2 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_29171               39814 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       108373 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112035 0 +    128679 C
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 240 0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20659377 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17480 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               238147 2 +    327341 I
e Hapalemur_occidentalis.k141_907772                          9234 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402 0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298 0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517 0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   30075 0 +     78134 C
e Glis_glis.GliGli_scaffold_19807                            30347 0 +     49224 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_56069               25462 0 +     26054 C
e Galagoides_demidoff.k141_31856                              3208 0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848498 0 +   3816255 C
e Felis_nigripes.FelNig_flattened_line_20823                  5510 2 -     36744 I
e Felis_catus_fca126.CM031415.1                           20191985 2 + 205367284 I
e Eulemur_sanfordi.k141_1122526                               9432 0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267 0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247 0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321 0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369 0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369 0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184 0 -     25546 C
e Eulemur_collaris.k141_377015                                2154 0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453 0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             24792 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           10855 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3325339 0 -   7059049 C
e Equus_przewalskii.KK951119.1                               29586 0 +    498745 C
e Equus_caballus.CM000403.2                               18527571 0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1279750 0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2144065 0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16325770 0 -  41312741 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089003 0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       310280 0 +    607251 C
e Eidolon_helvum.KE759718.1                                   7414 0 +     11740 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 31488 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12014 0 +     14536 C
e Dipodomys_ordii.KN672350.1                              18895804 0 +  37912305 C
e Dinomys_branickii.DinBra_scaffold_21862                    34271 0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    2483 0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  669408 0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8627908 0 +  20541912 C
e Delphinapterus_leucas.KZ290073.1                        16811179 0 +  35494412 C
e Daubentonia_madagascariensis.ctg71                      12532892 0 -  12879189 C
e Dasypus_novemcinctus.JH564415.1                            61065 0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1231 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 2848 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             24230 2 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_287352               365 0 +      4208 C
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          10493 0 -     20389 C
e Condylura_cristata.JH655891.1                           17545984 0 -  53390261 C
e Choloepus_hoffmanni.KN194906.1                            170253 0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15154 0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1248493 0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           12071 0 +     57038 C
e Cheirogaleus_major.k141_333249                             16722 0 -     52598 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            4795 0 -      6351 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2593 0 -      3715 C
e Cephalopachus_bancanus.k141_2037105                         4955 0 -      8605 C
e Cavia_tschudii.CavTsc_scaffold_8919                        98598 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18359723 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18347463 0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     89250 0 +    217609 C
e Castor_canadensis.CasCan_scaffold_2074                    133642 0 +    179628 C
e Carollia_perspicillata.CarPer_scaffold_92756                2877 0 -     11696 C
e Carlito_syrichta.NW_007259797.1                           141039 0 -    496798 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18059996 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18829276 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18496781 0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17955480 0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9031216 0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    181829 0 -    185531 C
e CanFam4.chr16                                           17795772 0 -  60362399 C
e Camelus_ferus.KB017975.1                                  399642 0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2331366 0 -   7040546 C
e Camelus_bactrianus.KN276810.1                            9998902 0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2818451 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18082962 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1124884 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20272324 0 +  48749331 C
e Bison_bison.KN261452.1                                    199119 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    26080 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2009 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15191543 0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              49929 0 +     85213 C
e Avahi_laniger.k141_765380                                  49304 0 -     92717 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  2459 0 +     43469 C
e Arctocebus_calabarensis.k141_288239                        14445 0 +     17124 C
e Aplodontia_rufa.AprRuf_scaffold_68852                       7262 0 +     20879 C
e Antilocapra_americana.AntAmePen_scaffold_12469             97610 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183107 0 +    412891 C
e Ammotragus_lervia.NIVO01071767.1                          675158 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     64987 0 -     89534 C
e Ailurus_fulgens.LNAC01001112.1                             75208 0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9506984 0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           823285 2 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                        846  3 +     62944 TG--------------------C
s Acinonyx_jubatus.LLWD01001279.1                           823287  1 -   1699592 ----------------------G
i Acinonyx_jubatus.LLWD01001279.1                        I 2 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506984 14 -  29979442 -AGAATACAAC-T----C--A-T
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             75208 14 -    347723 -AGAATAAAAC-T----C--A-C
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64987 14 -     89534 -AAAGTA--TG--A--CCC-A-C
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9319  3 -     52922 CA--------------------T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9246  3 -     28001 CA--------------------T
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9372  3 -      9772 CA--------------------T
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            529  3 -     12518 CA--------------------T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675158 14 -   2318259 -AGAGTAAAA--T----CC-A-T
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183107 14 +    412891 -AGACTAA----TA--CCC-A-T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97610 14 -    100397 -AGAGTAAAA--T----CC-A-T
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7262 14 +     20879 -AGAGTA---G--AA-CCC-A-T
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14445  2 +     17124 -A--------------------T
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2459 14 +     43469 -AGACTAA----TACA-C--A-T
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  49304  2 -     92717 -A--------------------T
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              49929  2 +     85213 -A--------------------T
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191543 14 +  23207421 -AGAGTAAAA--T----CC-A-T
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2009 14 -     18090 -AGAGTAAAA--T----CC-A-T
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26080 14 +     34529 -AGAGTAAAA--T----CC-A-T
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    199119 14 -    288883 -AGAGTAAAA--T----CT-G-T
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20272324 14 +  48749331 -AGAGTAAAA--T----CT-G-T
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1124884 14 -   1948126 -AGAGTAAAA--T----CT-G-T
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18082962 14 +  45695690 -AGAGTAAAA--T----CT-G-T
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2818451 14 +   4408762 -AGAGTAAAA--T----CC-G-T
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998902 14 -  17673402 -AGAGTAAAA--T----CC-A-C
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331366 14 -   7040546 -AGAGTAAAA--T----CC-A-C
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399642 14 -   1652518 -AGAGTAAAA--T----CC-A-C
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795772 14 -  60362399 -AGAGTAAAA---A--TC--A-T
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181829 14 -    185531 -AGAGTAAAAC-T----C--A-T
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031216 14 -   9314153 -AGAGTAAAA---A--TC--A-T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955480 14 -  59632846 -AGAGTAAAAC-T----C--A-T
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496781 14 +  63665305 -ACAGTAAAAC-T----C--A-T
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18829276 14 +  46296322 -AGAGTAAAA--T----CC-A-T
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18059996 14 -  44709034 -AGAGTAAAA--T----CC-A-T
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           141039 14 -    496798 -TGAGTA---G--AA-CCC-T-T
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2877 14 -     11696 -AGACTAA----TA--TCC-A-C
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133642 14 +    179628 -AGGGTA---G--AA-CCC-A-T
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89250 14 +    217609 -AG-G-----G-TAAAACCCA-C
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18347463 14 -  23392119 -A---TAATAG--AA-CCC-A-T
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18359723 14 -  23407841 -A---TAATAG--AA-CCC-A-T
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98598 14 +    143979 -AGA--A-----TACAACCCA-T
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         4955 14 -      8605 -TGAGTA---G--AA-CCC-T-T
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227875 14 +  27778364 -AGAGTCAAA------CCC-A-T
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2593 14 -      3715 -AGAGTCAAA------CCC-A-T
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470290  3 +   4669795 CA--------------------T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8839  3 -     19203 CA--------------------T
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3258  3 +      8260 CA--------------------T
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3488  3 +     27781 CA--------------------T
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3634  3 -     20310 CA--------------------T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6618  3 +     29689 CA--------------------T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             971  3 +      9989 CA--------------------T
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9306  3 -     27936 CA--------------------T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9325  3 -     11289 CA--------------------T
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811701  3 +  39242232 CA--------------------T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217392  3 -  21565898 CA--------------------T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34512  3 -     53127 CA--------------------T
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1804  3 +      7159 CA--------------------T
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9317  3 -     27947 CA--------------------T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9293  3 +     17596 CA--------------------T
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39787  3 -     41420 CA--------------------T
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4795 19 -      6351 -AGAGTAAAAG-TAAAACC-A-C
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16722  2 -     52598 -A--------------------T
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12071  2 +     57038 -A--------------------T
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1248493 14 +   2543920 -AGAGTAAAA--T---TCC---T
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18423256  3 -  18827391 CA--------------------T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9699  3 -     50209 CA--------------------T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416704  3 + 135778131 CA--------------------T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15154 19 +     19366 -AGAGTAAAAG-TAAAACC-T-T
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170253 19 +    839153 -AGAGTAAAAG-TAAAACC-T-T
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1905233  3 +   2368649 CA--------------------T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944903  3 + 200372422 CA--------------------T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31772  3 +     84244 CA--------------------T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545984 13 -  53390261 -AG-GTAA--G----GCCC-A-C
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10493 14 -     20389 -AGAGTAACA--CA---C--A-T
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24232  1 -     87169 ----------------------G
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 2 C 0
s Crocidura_indochinensis.CroInd_scaffold_287352               365  1 +      4208 -A---------------------
i Crocidura_indochinensis.CroInd_scaffold_287352         C 0 I 12
s Cuniculus_paca.CunPac_flattened_line_231100                 2848 14 +      5455 -AGAGTA---G--AA-CCC-A-T
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1231 14 +      3576 -AGAGTA---G--AA-CCC-A-C
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            61065 19 +   2246927 -AGAGTAAA-GCTAAAACC-A-T
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532892  2 -  12879189 -A--------------------T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811179 14 +  35494412 -AGAGTAAAA--T----CC-A-T
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8627908 14 +  20541912 -AGACTAA----T--GCCC-A-T
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669408 14 +   1390856 -AGAGTAAAA------CCC-A-T
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2483 14 +    198055 -AGAGTCAAA------CCC-A-T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34271 14 +     67921 -AGAGTAAAAC-T----CC---T
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18895804 14 +  37912305 -AGAGTA---G--AA-CCC-A-T
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  12014 14 +     14536 -AGAGTA---G--AA-CCC-A-T
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31488 14 -     42551 -AGAATA---G--AA-CCC-A-T
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE759718.1                                   7414 14 +     11740 -AGAATAACA--T---TC--A-T
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310280 14 +    607251 -AGAGTAAAA--T----CC-A-C
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1089003 13 +  10337057 -ACAGT----G--AAA-CT-A-C
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16325770 11 -  41312741 -AGA--AAA-C-T----C--A-C
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144065 14 -  14770903 -A-A--AA----TAATACCCA-T
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279750 14 +   4378816 -AGAGTAAAA------CCC-A-T
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527571 14 -  39960074 -AGAGTAAAA------CCC-C-T
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29586 14 +    498745 -AGAGTAAAA------CCC-C-T
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3325339 14 -   7059049 -AGAGCAAAA---A---CC-A-C
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21199935  3 -  21539334 CA--------------------T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10855 14 +    133382 -AGAGTAAAA--T----CC-A-T
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24792 14 -     44125 -AGAGTAAAA--T----CC-A-T
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.AANG03299807.1                                   409  1 -       507 ----------------------G
i Felis_catus.AANG03299807.1                             I 2 C 0
s Felis_catus_fca126.CM031415.1                           20191987  1 + 205367284 ----------------------G
i Felis_catus_fca126.CM031415.1                          I 2 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  5512  1 -     36744 ----------------------G
i Felis_nigripes.FelNig_flattened_line_20823             I 2 C 0
s Fukomys_damarensis.KN121974.1                             848498 14 +   3816255 -AGAGCA---G-CA--TCC-A-C
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galagoides_demidoff.k141_31856                              3208  2 -      3432 -a--------------------t
i Galagoides_demidoff.k141_31856                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25462 14 +     26054 -AGAATA---G--AAAGC--A-C
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30347 14 +     49224 -AGAGTA---G--AA-CCC-A-T
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              10564  3 -     32273 CA--------------------T
i Gorilla_beringei.k141_3596273                          C 0 T 140
s Gorilla_gorilla.LT578341.1                             186332714  3 + 186649187 CA--------------------T
i Gorilla_gorilla.LT578341.1                             C 0 T 140
s Graphiurus_murinus.GraMur_scaffold_10447                   30075 14 +     78134 -AGAGTA---G--AA-CCC-A-T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238149  1 +    327341 ----------------------G
i Helogale_parvula.HelPar_flattened_line_2585            I 2 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17480 14 +     36099 -AGAGTAAAA--T----CC-A-T
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20659377 14 +  22651954 -AGAGTA---G--AACTC--A-T
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 240 13 +       961 -ACAGCAAAA--T----CC---T
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112035 14 +    128679 -AGAGTAAAA--T----CC-A-T
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108373 14 +   1711038 -AGCGT----G--ACACCC-A-T
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39814 14 +     43066 -AGCGT----G--ACACCC-A-T
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    429466  2 +    630532 TG---------------------
i Hoolock_leuconedys.ctg274                                 C 0 T 202
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40614  1 +     55795 ----------------------G
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 2 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19846 14 -    143317 -AGAATA---G--AA-TCC-A-T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_307679                               12386  3 -     15490 CA--------------------T
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              54391  3 +     67168 CA--------------------T
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189538043  3 - 191637585 CA--------------------T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3330936  3 -  11177569 CA--------------------T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80920 14 +    135385 -AGAGTA---G--AAA-CC-A-T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514582 14 -   7955117 -AGAGTA---G--AA-CCC-A-T
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   18164  2 +     31101 -A--------------------T
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22396 14 +     23964 -AGAGTAAAA--T----CC-A-T
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271367 14 -   9596543 -AAAGTA---G-GA--TCC-A-C
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1663 14 -      3359 -AGAGTAAAA--T----CC-A-T
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    12244 14 -     42476 -GGA--A-----TAAAACC-TGT
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6798  2 -     23766 -A--------------------T
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24745  2 +     45836 -A--------------------T
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31656  2 -     32627 -A--------------------T
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      22800  2 +     54090 -A--------------------T
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3036103 14 +   3914936 -AAAGTAAAAC-T----C--A-T
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             267474 14 -    662738 -AGAGTAAAA--T----CC-A-T
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1431461  3 +   1826925 CA--------------------T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             692  2 +     11245 -A--------------------T
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999528  2 +   6120653 -A--------------------T
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214513 13 -  43346337 -AGAGTAAAA-------CC-A-T
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951720 14 -  59628241 -AGAGTAAAAC-T----C--A-T
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               1645  3 +     40492 CA--------------------T
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670905  3 +  60120075 CA--------------------T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7403  3 -     26193 CA--------------------T
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75197  3 -    114318 CA--------------------T
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   916  3 -     23192 CA--------------------T
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10369  3 -     29190 CA--------------------T
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18936  3 +     37952 CA--------------------T
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834024  3 + 187317192 CA--------------------T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452585  3 -  25927173 CA--------------------T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74785  3 +     89720 CA--------------------T
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1782  3 +     20474 CA--------------------T
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1583  3 -     14993 CA--------------------T
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324456  3 -    668171 CA--------------------T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15725  3 -     15935 CA--------------------T
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20522  3 -     45290 CA--------------------T
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87560 14 +     94391 -AGAATAACA--T---TC--A-T
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23932077  3 -  24302211 CA--------------------T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346255  3 +    752769 CA--------------------T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15605 14 +    737560 -AGAGTA-----TAAATGC---T
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              46994 14 -    317179 -AGAGTA-----TAAATGC---T
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097432 14 -  40650429 -ATAGTA---G--AACTC--A-T
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6775 14 -    207569 -AGGGTAA--C-T---CCC-A-T
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6234 14 +     13704 -AGAGTAAAAC-T----C--A-T
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3064 14 +     10310 -AGATTAAAA--T----CC-A-T
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18283324  2 -  93316391 -A--------------------T
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13419 14 -     19307 -AGACTA---G-TA--CCC-A-T
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849093 14 +   8254450 -AGAGTAACA--T----CC-A-T
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32969 14 +     64694 -AGAGTAACA--T----CC-A-T
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3812  3 -     28506 CA--------------------T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62433 14 -     63350 -AAAGTAAAAC-T----C--A-C
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      4678  2 -     37649 -A--------------------T
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26569 14 -    437263 -AGAGTAAAA--T----CC-A-T
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137825 14 -    366855 -AG-G-----G-TAAAACC-AGT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_61429                  27420 12 -     27816 -AG--TAAAA--T---TC--A-T
i Moschus_moschiferus.MosMos_scaffold_61429              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31350  1 +     37127 ----------------------G
i Mungos_mungo.MunMun_flattened_line_23663               I 2 C 0
s Murina_feae.MurFea_scaffold_85699                           5119 14 +     14753 -GGAATAA----TA--CCC-A-T
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2340 14 +     14296 -AGAGTA---G--AA-CCC-A-T
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               297665 14 -  14710649 -AGAGTAAAAC-T----C--A-C
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                278289 14 -  10118263 -GGAATAA----TA---CCTA-T
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585846 14 -   6019432 -GGAATAA----TA---CCTA-T
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902055 14 -   4330536 -GGA--ACAA--TA---CCTA-T
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32614 14 +     33610 -AGAATAA----TA---CCTA-T
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186105 19 +    196477 -ACAATAAAAG-TAAAACC-A-C
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025508 14 -   3037898 -AGA--AGA-G--AA-TCC-A-T
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                                9825  3 +     21681 CA--------------------T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865525 14 +   7148211 -AGAGTAAAA--T----CC-A-T
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756389 14 +    783361 -AAAGCAA----TA--CCC-A-T
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145981 14 -   9404916 -AGAGTAAAAC-T----C--A-T
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102574496  2 - 196305487 -A--------------------T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2182  2 +      8486 -A--------------------T
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744923  2 + 199412804 -A--------------------T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355749 14 +   3988456 -ACAGT----G-GAA-CCC-A-T
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              500722 14 -   2017862 -AAAGTAAAAC-T----C--A-T
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         144652 14 +    630418 -AGAGTAAAA--T----CC-T-C
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  2781440 14 -  10937097 -AGGGTAAAA--T----CC-A-T
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6850  1 -     18566 ----------------------T
i Orycteropus_afer.OryAfe_flattened_line_144387          I 12 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458735 14 -    559221 -AGAGTAAAAC-T----C--A-T
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17585011 14 +  44047080 -AGAGTAAAA--T----CC-A-T
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173432 14 -    191736 -AGAGTAAAA--T----CC-A-T
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    38612  3 +     80009 tg--------------------c
i Pan_paniscus.KQ411613.1                                I 69 C 0
s Pan_troglodytes.CM009242.2                             189137577  3 + 189151597 ca--------------------t
i Pan_troglodytes.CM009242.2                             C 0 T 417
s Panthera_onca.PanOnc_flattened_line_3271                  147134  1 +    230217 ----------------------G
i Panthera_onca.PanOnc_flattened_line_3271               I 2 C 0
s Panthera_pardus.KV860321.1                                259843  1 +  18783137 ----------------------G
i Panthera_pardus.KV860321.1                             I 2 C 0
s Panthera_tigris.KE722367.1                               4716990  1 -   8748460 ----------------------G
i Panthera_tigris.KE722367.1                             I 2 C 0
s Pantholops_hodgsonii.KE114653.1                          1264365 14 -   2937107 -AGAGTAAAA--T----CC-A-T
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183437399  3 + 183742232 CA--------------------T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1557  3 +     20448 CA--------------------T
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20558083  3 +  20919399 CA--------------------T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                    300  3 +     41871 CA--------------------T
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     3586  3 +     27711 CA--------------------T
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  3485  3 +      9205 CA--------------------T
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8869  1 -     78924 ----------------------G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 2 C 0
s Perodicticus_ibeanus.k141_855320                            4678  2 +     13100 -C--------------------T
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             3046  2 +     25941 -C--------------------T
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25845 13 -     29689 -AGAGTA---G--AA--CT-A-G
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8487 14 +     63832 -AGAGTAAAA--T----CC-A-T
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38341  3 +     62158 CA--------------------T
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33068  3 +     89929 CA--------------------T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34484  3 +     51399 CA--------------------T
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290705  3 -  14605196 CA--------------------T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              439 14 +     22620 -AGA-TAAA---TA--CCC-A-T
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34193 14 +     35617 -AGAGTAAAA--T----CC-A-T
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189125758  3 + 189387572 CA--------------------T
i Pongo_abelii.CM009266.2                                C 0 T 205
s Pongo_pygmaeus.ctg66                                     9565362  3 +   9816681 CA--------------------T
i Pongo_pygmaeus.ctg66                                   C 0 T 206
s Presbytis_comata.k141_677006                               67985  3 -     81375 CA--------------------T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9812  3 +     10147 CA--------------------T
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 10001 13 -     22811 -ACAGCAAAA-------CC-C-T
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986375  2 +   2598838 -A--------------------T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          24664  2 +     38485 -A--------------------T
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                              825  2 +      4256 -A--------------------T
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22183  2 +     35766 -A--------------------T
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            366  2 -     24134 -A--------------------T
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24178  2 -     67325 -A--------------------T
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            423  2 -      6182 -A--------------------T
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11207 19 -     21811 -AGACTA-TCC-TAATACCCA-T
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36676 14 +     42204 -AGAGTAAAAC-T----C--A-C
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973683 14 +  28871421 -AGAATAACA--T----CC-A-T
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1620 14 -      8028 -AGAATAACA--T----CC-A-T
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20270301  1 -  38429054 ----------------------G
i Puma_concolor.QAVW01001104.1                           I 2 C 0
s Pygathrix_cinerea.k141_1153803                              9814  3 -     91421 CA--------------------T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603948  3 +   7812017 CA--------------------T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9787  3 -     72585 CA--------------------T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4900 14 +     55207 -AGAGTAAAA--T----CC-T-C
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        366918 14 -   3329780 -AGCGTAACA------CCC-A-T
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             1500  3 -     11128 ca--------------------t
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230857  3 - 195417433 ca--------------------t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7666505  3 +   7961872 ca--------------------t
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84669 14 -     96226 -AGAATAACA--T---TC--A-T
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3553 14 +      4321 -AGAGTAAAA--T----CC-A-T
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151366 13 -    313613 -AG-GTAAA-G-----CCC-A-T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          14329  3 -     19888 CA--------------------T
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21534  3 +     39453 CA--------------------T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2058  3 +     27826 CA--------------------T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1580  3 -     19483 CA--------------------T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1642  3 +      7198 CA--------------------T
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9902  3 +     15514 CA--------------------T
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187690 14 -    191337 -AGAGTAAAA------CCC-C-T
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13647020 14 -  18376816 -AGA--A-----TAAAACC-TGG
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1948224 14 -   3870691 -AGAGTA---G--AA-CCC-A-T
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27218 14 +     97271 -ACAGTAAAAC-T----C--A-C
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14219  1 -    196729 ----------------------G
i Suricata_suricatta.SurSur_flattened_line_6629          I 2 C 0
s Sus_scrofa.CM000828.4                                   62882459 14 -  69701581 -AGAGTAAAA------CCC-A-T
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1088084  3 -   1523678 CA--------------------T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6822 14 +     41958 -AGAGTAA----TA--CCC-A-T
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69467 19 +    116680 -ACGGTAAAAG-TAAAACC-A-T
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115205 14 -    156842 -AAAGTAAAAC-T----C--A-T
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383660 14 +    539355 -A-A--A---G-TAAAACCCA-T
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10654 14 +     70052 -TGAGTA---G--AA-CCC-T-T
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               14959 14 +     25099 -TGAGTA---G--AA-CCC-T-T
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422908  3 + 186847797 CA--------------------T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103186 14 +    114563 -ACAGT------TAAAGCC-A-A
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   1853 19 +      8208 -AGAGTAAAAG-TAAAACC-A-T
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78963 14 +    610378 -AGACTAA--G--A--CCC-A-T
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          5636  3 -     20410 CA--------------------T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9831  3 +     15221 CA--------------------T
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5736  3 +     19930 CA--------------------T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2166  3 -     19997 CA--------------------T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42285  3 -     60166 CA--------------------T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9757  3 -     27529 CA--------------------T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9697  3 -     18194 CA--------------------T
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3433  3 -     21137 CA--------------------T
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2135  3 -     10723 CA--------------------T
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1288  3 +      9834 CA--------------------T
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19606  3 +     32220 CA--------------------T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933703  3 +   6242583 CA--------------------T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2948  3 +     20839 CA--------------------T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    670 14 -      1748 -AGAATAAAA--T---TC--A-T
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 C 0
s Tupaia_chinensis.KB320699.1                              2149617 13 +   4065304 -AGAGTA---G--A--CCC-A-C
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     3208 13 -     10553 -AGAGTA---G--A--CCC-A-C
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737687 14 +  33153633 -AGAGTAAAA--T----CC-A-T
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_97021                    1918 14 -      4736 -A-AGGAAAAG-T----CC-A-T
i Uropsilus_gracilis.UroGra_scaffold_97021               C 0 C 0
s Ursus_maritimus.KK499267.1                               4846919 14 -   5085361 -AGAGTACAAC-T----C--A-T
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368391 14 -   5488506 -AGAGTAAAA--T----CC-A-C
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7396 14 -     43706 -AGAGTAAAAC-T----C--A-T
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19719 14 -     24430 -AGAGTA---G--AA-CCC-A-T
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1844 14 +      2932 -AAAGTAAAAC-T----C--A-T
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      10001 13 +     63895 -AAAGTA---G-GA---CC-A-C
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11379 14 +     12536 -AGATTAAAA--T----CC-A-T
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25316 22 +     32600 T
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    15418  9 -    145209 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                        849 2 +     62944 TA
s Gorilla_beringei.k141_2022027                               1777 2 +      3305 TA
i Gorilla_beringei.k141_2022027                          T 186 I 2
s Gorilla_gorilla.CYUI03002401.1                              6000 2 +      7071 ta
i Gorilla_gorilla.CYUI03002401.1                         T 256 I 2
s Pan_troglodytes.CM009242.2                             189137163 2 + 189151597 ta
i Pan_troglodytes.CM009242.2                             T 417 I 206
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Loris_tardigradus.ctg83                                   999530 0 +   6120653 C
e Loris_lydekkerianus.k141_2539221                             694 0 +     11245 C
e Perodicticus_potto.k141_1092580                             3048 0 +     25941 C
e Perodicticus_ibeanus.k141_855320                            4680 0 +     13100 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            11393 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      10014 0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_63728          1858 0 +      2932 C
e Xerus_inauris.XerIna_scaffold_48378                        19733 0 -     24430 C
e Vulpes_lagopus.VulLag_flattened_line_30954                  7410 0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5368405 0 -   5488506 C
e Varecia_variegata.k141_1128296                              7155 0 +     24756 C
e Varecia_rubra.k141_590885                                   7107 0 +     50397 C
e Ursus_maritimus.KK499267.1                               4846933 0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_97021                    1932 0 -      4736 C
e Tursiops_truncatus.MRVK01000835.1                       15737701 0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     3221 0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2149630 0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                    684 0 -      1748 C
e Trachypithecus_pileatus.k141_2007326                        2951 0 +     20839 C
e Trachypithecus_phayrei.ctg124                            5933706 0 +   6242583 C
e Trachypithecus_obscurus.k141_190785                        19609 0 +     32220 C
e Trachypithecus_melamera.k141_434728                         1291 0 +      9834 C
e Trachypithecus_leucocephalus.k141_587342                    2138 0 -     10723 C
e Trachypithecus_laotum.k141_907409                           3436 0 -     21137 C
e Trachypithecus_hatinhensis.k141_143409                      9700 0 -     18194 C
e Trachypithecus_germaini.k141_912491                         9760 0 -     27529 C
e Trachypithecus_geei.k141_277701                            42288 0 -     60166 C
e Trachypithecus_francoisi.k141_1412647                       2169 0 -     19997 C
e Trachypithecus_cristatus.k141_580354                        5739 0 +     19930 C
e Trachypithecus_crepusculus.k141_1194022                     9834 0 +     15221 C
e Trachypithecus_auratus.k141_722599                          5639 0 -     20410 C
e Tonatia_saurophila.TonSau_scaffold_294                     78977 0 +    610378 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   1872 0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103200 0 +    114563 C
e Theropithecus_gelada.CM009954.1                        186422911 0 + 186847797 C
e Tarsius_wallacei.k141_780063                               14973 0 +     25099 C
e Tarsius_lariang.k141_2201908                               10668 0 +     70052 C
e Tapirus_terrestris.TapTer_scaffold_755                    383674 0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      115219 0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 69486 0 +    116680 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                 6836 0 +     41958 C
e Symphalangus_syndactylus.tarseq_199                      1088087 0 -   1523678 C
e Sus_scrofa.CM000828.4                                   62882473 0 -  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629              14220 0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             27232 0 +     97271 C
e Spermophilus_dauricus.KZ294078.1                         1948238 0 -   3870691 C
e Sorex_araneus.JH798187.1                                13647034 0 -  18376816 C
e Solenodon_paradoxus.SolPar_flattened_line_5840            187704 0 -    191337 C
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Semnopithecus_vetulus.k141_1200928                          9905 0 +     15514 C
e Semnopithecus_schistaceus.k141_1584426                      1645 0 +      7198 C
e Semnopithecus_priam.k141_638794                             1583 0 -     19483 C
e Semnopithecus_johnii.k141_670120                            2061 0 +     27826 C
e Semnopithecus_hypoleucos.k141_1615806                      21537 0 +     39453 C
e Semnopithecus_entellus.k141_11662                          14332 0 -     19888 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    151379 0 -    313613 C
e Saiga_tatarica.SaiTat_scaffold_373180                       3567 0 +      4321 C
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                84683 0 -     96226 C
e Rhinopithecus_strykeri.ctg102                            7666508 0 +   7961872 C
e Rhinopithecus_roxellana.NC_044550.1                     91230860 0 - 195417433 C
e Rhinopithecus_bieti.k119_217274                             1503 0 -     11128 C
e Rhinolophus_sinicus.LVEH01000134.1                        366932 0 -   3329780 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4914 0 +     55207 C
e Pygathrix_nigripes_a.k141_215492                              9790 0 -     72585 C
e Pygathrix_nigripes_b.ctg100                                 7603951 0 +   7812017 C
e Pygathrix_cinerea.k141_1153803                              9817 0 -     91421 C
e Puma_concolor.QAVW01001104.1                            20270302 0 -  38429054 C
e Pteropus_vampyrus.KN534172.1                                1634 0 -      8028 C
e Pteropus_alecto.KB030862.1                              22973697 0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         36690 0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            11226 0 -     21811 C
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Propithecus_verreauxi.k141_956661                            425 0 -      6182 C
e Propithecus_tattersalli.k141_790011                        24180 0 -     67325 C
e Propithecus_perrieri.k141_1200571                            368 0 -     24134 C
e Propithecus_edwardsi.k141_1176054                          22185 0 +     35766 C
e Propithecus_diadema.k141_357118                              827 0 +      4256 C
e Propithecus_coronatus.k141_347390                          24666 0 +     38485 C
e Propithecus_coquerelli.NW_012148875.1                     986377 0 +   2598838 C
e Prolemur_simus.MPIZ01000396.1                            2592414 0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10014 0 -     22811 C
e Presbytis_mitrata.k141_2342859                              9815 0 +     10147 C
e Presbytis_comata.k141_677006                               67988 0 -     81375 C
e Pongo_pygmaeus.ctg66                                     9565365 206 +   9816681 T
e Pongo_abelii.CM009266.2                                189125761 205 + 189387572 T
e Platanista_gangetica.PlaMin_flattened_line_32310           34207 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              453 0 +     22620 C
e Piliocolobus_tephrosceles.PDMG02000141.1                14290708 0 -  14605196 C
e Piliocolobus_kirkii.k141_448987                            34487 0 +     51399 C
e Piliocolobus_gordonorum.k141_381342                        33071 0 +     89929 C
e Piliocolobus_badius.k141_1234363                           38344 0 +     62158 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               8501 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     25858 0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25316 22 +     32600 T
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8870 0 -     78924 C
e Papio_ursinus.k141_3428135                                  3488 0 +      9205 C
e Papio_papio.k141_802527                                     3589 0 +     27711 C
e Papio_kindae.k141_1936966                                    303 0 +     41871 C
e Papio_hamadryas.Contig39                                20558086 0 +  20919399 C
e Papio_cynocephalus.k141_4307930                             1560 0 +     20448 C
e Papio_anubis.CM001495.2                                183437402 0 + 183742232 C
e Pantholops_hodgsonii.KE114653.1                          1264379 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4716991 0 -   8748460 C
e Panthera_pardus.KV860321.1                                259844 0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  147135 0 +    230217 C
e Pan_paniscus.KQ411613.1                                    38615 0 +     80009 C
e Ovis_canadensis.OviCan_scaffold_2572                      173446 0 -    191736 C
e Ovis_aries.CM001607.2                                   17585025 0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       458749 0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               6851 0 -     18566 C
e Orcinus_orca.KB316932.1                                  2781454 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144666 0 +    630418 C
e Odobenus_rosmarus.KB229312.1                              500736 0 -   2017862 C
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1355763 0 +   3988456 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744925 0 + 199412804 C
e Nycticebus_coucang.k141_5327727                             2184 0 +      8486 C
e Nycticebus_bengalensis.LG01                            102574498 0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9145995 0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    756403 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5865539 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nasalis_larvatus.k141_413338                                9828 0 +     21681 C
e Nannospalax_galili.KL204047.1                            2025522 0 -   3037898 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186124 0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        32628 0 +     33610 C
e Myotis_lucifugus.GL429869.1                              3902069 0 -   4330536 C
e Myotis_davidii.KB100139.1                                1585860 0 -   6019432 C
e Myotis_brandtii.KE162005.1                                278303 0 -  10118263 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               297679 0 -  14710649 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              2354 0 +     14296 C
e Murina_feae.MurFea_scaffold_85699                           5133 0 +     14753 C
e Mungos_mungo.MunMun_flattened_line_23663                   31351 0 +     37127 C
e Moschus_moschiferus.MosMos_scaffold_61429                  27432 0 -     27816 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 137839 0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    26583 0 -    437263 C
e Mirza_zaza.k141_952172                                      4680 0 -     37649 C
e Mirounga_angustirostris.MirAng_flattened_line_22144        62447 0 -     63350 C
e Miopithecus_ogouensis.k141_534055                           3815 0 -     28506 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             32983 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849107 0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                13433 0 -     19307 C
e Microgale_talazaci.MicTal_scaffold_6613                    15418 9 -    145209 I
e Microcebus_murinus.CM007674.1                           18283326 0 -  93316391 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3078 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365              6248 0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                         6789 0 -    207569 C
e Marmota_marmota.CZRN01000018.1                          33097446 0 -  40650429 C
e Manis_pentadactyla.KN006162.1                              47008 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              15619 0 +    737560 C
e Mandrillus_sphinx.Contig270                               346258 0 +    752769 C
e Mandrillus_leucophaeus.scaffold280                      23932080 0 -  24302211 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 87574 0 +     94391 C
e Macaca_tonkeana.k141_1498238                               20525 0 -     45290 C
e Macaca_thibetana.k99_7456                                  15728 0 -     15935 C
e Macaca_silenus.Contig273                                  324459 0 -    668171 C
e Macaca_siberu.k141_635500                                   1586 0 -     14993 C
e Macaca_radiata.k141_3680011                                 1785 0 +     20474 C
e Macaca_nigra.k141_1655396                                  74788 0 +     89720 C
e Macaca_nemestrina.KQ007038.1                            25452588 0 -  25927173 C
e Macaca_mulatta.NC_041758.1                             186834027 0 + 187317192 C
e Macaca_maura.k141_2733130                                  18939 0 +     37952 C
e Macaca_leonina.k141_3550399                                10372 0 -     29190 C
e Macaca_fuscata.k119_255327                                   919 0 -     23192 C
e Macaca_fascicularis.k141_814140                            75200 0 -    114318 C
e Macaca_cyclopis.k119_18836                                  7406 0 -     26193 C
e Macaca_assamensis.Contig5                               59670908 0 +  60120075 C
e Macaca_arctoides.k141_2326796                               1648 0 +     40492 C
e Lycaon_pictus.CM007581.1                                17951734 0 -  59628241 C
e Loxodonta_africana.GL010049.1                            4214526 0 -  43346337 C
e Lophocebus_aterrimus.ctg367                              1431464 0 +   1826925 C
e Lipotes_vexillifer.KE559953.1                             267488 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3036117 0 +   3914936 C
e Lepilemur_septentrionalis.k141_185316                      22802 0 +     54090 C
e Lepilemur_ruficaudatus.k141_420445                         31658 0 -     32627 C
e Lepilemur_dorsalis.k141_577674                             24747 0 +     45836 C
e Lepilemur_ankaranensis.k141_596936                          6800 0 -     23766 C
e Lemur_catta.scaffold_24                                 15519761 0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12258 0 -     42476 C
e Kogia_breviceps.KogBre_flattened_line_192630                1677 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8271381 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               22410 0 +     23964 C
e Indri_indri.k141_3655594                                   18166 0 +     31101 C
e Ictidomys_tridecemlineatus.JH393364.1                    7514596 0 -   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                      80934 0 +    135385 C
e Hylobates_pileatus_a.tarseq_633                            3330939 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189538046 0 - 191637585 C
e Hylobates_klossii.k141_282416                              54394 0 +     67168 C
e Hylobates_agilis.k141_307679                               12389 0 -     15490 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19860 0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  40615 0 +     55795 C
e Hoolock_leuconedys.ctg274                                    429468 202 +    630532 T
e Hipposideros_galeritus.HipGal_scaffold_29171               39828 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       108387 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112049 0 +    128679 C
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 253 0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20659391 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17494 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               238150 0 +    327341 C
e Hapalemur_occidentalis.k141_907772                          9234 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402 0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298 0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517 0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   30089 0 +     78134 C
e Glis_glis.GliGli_scaffold_19807                            30361 0 +     49224 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_56069               25476 0 +     26054 C
e Galagoides_demidoff.k141_31856                              3210 0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848512 0 +   3816255 C
e Felis_nigripes.FelNig_flattened_line_20823                  5513 0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20191988 0 + 205367284 C
e Eulemur_sanfordi.k141_1122526                               9432 0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267 0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247 0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321 0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369 0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369 0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184 0 -     25546 C
e Eulemur_collaris.k141_377015                                2154 0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453 0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             24806 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           10869 0 +    133382 C
e Erythrocebus_patas.Contig38                             21199938 0 -  21539334 C
e Erinaceus_europaeus.JH835339.1                           3325353 0 -   7059049 C
e Equus_przewalskii.KK951119.1                               29600 0 +    498745 C
e Equus_caballus.CM000403.2                               18527585 0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1279764 0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2144079 0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16325781 0 -  41312741 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089016 0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       310294 0 +    607251 C
e Eidolon_helvum.KE759718.1                                   7428 0 +     11740 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 31502 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12028 0 +     14536 C
e Dipodomys_ordii.KN672350.1                              18895818 0 +  37912305 C
e Dinomys_branickii.DinBra_scaffold_21862                    34285 0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    2497 0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  669422 0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8627922 0 +  20541912 C
e Delphinapterus_leucas.KZ290073.1                        16811193 0 +  35494412 C
e Daubentonia_madagascariensis.ctg71                      12532894 0 -  12879189 C
e Dasypus_novemcinctus.JH564415.1                            61084 0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1245 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 2862 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             24233 0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_287352               366 12 +      4208 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          10507 0 -     20389 C
e Condylura_cristata.JH655891.1                           17545997 0 -  53390261 C
e Colobus_polykomos.k141_906115                              31775 0 +     84244 C
e Colobus_guereza.LG01                                   199944906 0 + 200372422 C
e Colobus_angolensis.KN981557.1                            1905236 0 +   2368649 C
e Choloepus_hoffmanni.KN194906.1                            170272 0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15173 0 +     19366 C
e Chlorocebus_sabaeus.CM001947.1                         135416707 0 + 135778131 C
e Chlorocebus_pygerythrus.k141_1025673                        9702 0 -     50209 C
e Chlorocebus_aethiops.ctg25                              18423259 0 -  18827391 C
e Chinchilla_lanigera.JH722012.1                           1248507 0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           12073 0 +     57038 C
e Cheirogaleus_major.k141_333249                             16724 0 -     52598 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            4814 0 -      6351 C
e Cercopithecus_roloway.k141_3180641                         39790 0 -     41420 C
e Cercopithecus_pogonias.k141_822820                          9296 0 +     17596 C
e Cercopithecus_petaurista.k141_807961                        9320 0 -     27947 C
e Cercopithecus_nictitans.k141_3278028                        1807 0 +      7159 C
e Cercopithecus_neglectus.k141_2526306                       34515 0 -     53127 C
e Cercopithecus_mona.ctg39                                21217395 0 -  21565898 C
e Cercopithecus_albogularis.ctg5                                38811704 0 +  39242232 C
e Cercopithecus_lowei.k141_457449                             9328 0 -     11289 C
e Cercopithecus_hamlyni.k141_187466                           9309 0 -     27936 C
e Cercopithecus_diana.k141_2427854                             974 0 +      9989 C
e Cercopithecus_cephus.k141_1078548                           6621 0 +     29689 C
e Cercopithecus_ascanius.k141_1024104                         3637 0 -     20310 C
e Cercocebus_torquatus.k141_3057011                           3491 0 +     27781 C
e Cercocebus_lunulatus.k141_3846941                           3261 0 +      8260 C
e Cercocebus_chrysogaster.k141_393940                         8842 0 -     19203 C
e Cercocebus_atys.KQ010504.1                               4470293 0 +   4669795 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2607 0 -      3715 C
e Cephalopachus_bancanus.k141_2037105                         4969 0 -      8605 C
e Cavia_tschudii.CavTsc_scaffold_8919                        98612 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18359737 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18347477 0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     89264 0 +    217609 C
e Castor_canadensis.CasCan_scaffold_2074                    133656 0 +    179628 C
e Carollia_perspicillata.CarPer_scaffold_92756                2891 0 -     11696 C
e Carlito_syrichta.NW_007259797.1                           141053 0 -    496798 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18060010 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18829290 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18496795 0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17955494 0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9031230 0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    181843 0 -    185531 C
e CanFam4.chr16                                           17795786 0 -  60362399 C
e Camelus_ferus.KB017975.1                                  399656 0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2331380 0 -   7040546 C
e Camelus_bactrianus.KN276810.1                            9998916 0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2818465 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18082976 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1124898 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20272338 0 +  48749331 C
e Bison_bison.KN261452.1                                    199133 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    26094 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2023 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15191557 0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              49931 0 +     85213 C
e Avahi_laniger.k141_765380                                  49306 0 -     92717 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  2473 0 +     43469 C
e Arctocebus_calabarensis.k141_288239                        14447 0 +     17124 C
e Aplodontia_rufa.AprRuf_scaffold_68852                       7276 0 +     20879 C
e Antilocapra_americana.AntAmePen_scaffold_12469             97624 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183121 0 +    412891 C
e Ammotragus_lervia.NIVO01071767.1                          675172 0 -   2318259 C
e Allochrocebus_solatus.k141_166128                            532 0 -     12518 C
e Allochrocebus_preussi.k141_310680                           9375 0 -      9772 C
e Allochrocebus_lhoesti.k141_4309873                          9249 0 -     28001 C
e Allenopithecus_nigroviridis.k141_3361533                    9322 0 -     52922 C
e Allactaga_bullata.AllBul_scaffold_9566                     65001 0 -     89534 C
e Ailurus_fulgens.LNAC01001112.1                             75222 0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9506998 0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           823288 0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                        851 2 +     62944 T--G
s Acinonyx_jubatus.LLWD01001279.1                           823288 2 -   1699592 T--G
i Acinonyx_jubatus.LLWD01001279.1                        C 0 T 65
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506998 2 -  29979442 T--G
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 T 83
s Ailurus_fulgens.LNAC01001112.1                             75222 2 -    347723 T--G
i Ailurus_fulgens.LNAC01001112.1                         C 0 T 84
s Allactaga_bullata.AllBul_scaffold_9566                     65001 2 -     89534 T--G
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 T 87
s Allenopithecus_nigroviridis.k141_3361533                    9322 2 -     52922 T--G
i Allenopithecus_nigroviridis.k141_3361533               C 0 T 77
s Allochrocebus_lhoesti.k141_4309873                          9249 2 -     28001 T--G
i Allochrocebus_lhoesti.k141_4309873                     C 0 T 77
s Allochrocebus_preussi.k141_310680                           9375 2 -      9772 T--G
i Allochrocebus_preussi.k141_310680                      C 0 T 77
s Allochrocebus_solatus.k141_166128                            532 2 -     12518 T--G
i Allochrocebus_solatus.k141_166128                      C 0 T 77
s Ammotragus_lervia.NIVO01071767.1                          675172 2 -   2318259 T--G
i Ammotragus_lervia.NIVO01071767.1                       C 0 T 83
s Anoura_caudifer.AnoCau_scaffold_1412                      183121 2 +    412891 T--G
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 T 83
s Antilocapra_americana.AntAmePen_scaffold_12469             97624 2 -    100397 T--A
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 T 83
s Aplodontia_rufa.AprRuf_scaffold_68852                       7276 2 +     20879 C--A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 T 78
s Arctocebus_calabarensis.k141_288239                        14447 2 +     17124 T--A
i Arctocebus_calabarensis.k141_288239                    C 0 T 70
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2473 2 +     43469 T--G
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 T 83
s Avahi_laniger.k141_765380                                  49306 2 -     92717 T--G
i Avahi_laniger.k141_765380                              C 0 T 67
s Avahi_peyrierasi.k141_1424874                              49931 2 +     85213 T--G
i Avahi_peyrierasi.k141_1424874                          C 0 T 67
s Balaenoptera_acutorostrata.KI537508.1                   15191557 2 +  23207421 T--G
i Balaenoptera_acutorostrata.KI537508.1                  C 0 T 83
s Balaenoptera_bonaerensis.DF707048.1                         2023 2 -     18090 T--G
i Balaenoptera_bonaerensis.DF707048.1                    C 0 T 83
s Beatragus_hunteri.BeaHun_scaffold_50177                    26094 2 +     34529 T--G
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 T 83
s Bison_bison.KN261452.1                                    199133 2 -    288883 T--G
i Bison_bison.KN261452.1                                 C 0 T 83
s Bos_indicus.CM003047.1                                  20272338 2 +  48749331 T--G
i Bos_indicus.CM003047.1                                 C 0 T 83
s Bos_mutus.JH880303.1                                     1124898 2 -   1948126 T--G
i Bos_mutus.JH880303.1                                   C 0 T 83
s Bos_taurus.CM000203.6                                   18082976 2 +  45695690 T--G
i Bos_taurus.CM000203.6                                  C 0 T 83
s Bubalus_bubalis.KI419123.1                               2818465 2 +   4408762 T--G
i Bubalus_bubalis.KI419123.1                             C 0 T 83
s Camelus_bactrianus.KN276810.1                            9998916 2 -  17673402 T--G
i Camelus_bactrianus.KN276810.1                          C 0 T 83
s Camelus_dromedarius.KN272107.1                           2331380 2 -   7040546 T--G
i Camelus_dromedarius.KN272107.1                         C 0 T 83
s Camelus_ferus.KB017975.1                                  399656 2 -   1652518 T--G
i Camelus_ferus.KB017975.1                               C 0 T 83
s CanFam4.chr16                                           17795786 2 -  60362399 T--G
i CanFam4.chr16                                          C 0 T 84
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181843 2 -    185531 T--G
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 T 84
s Canis_lupus_dingo.QKWQ01000480.1                         9031230 2 -   9314153 T--G
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 T 84
s Canis_lupus_familiaris.chr16                            17955494 2 -  59632846 T--G
i Canis_lupus_familiaris.chr16                           C 0 T 84
s Canis_lupus_orion.HG994398.1                            18496795 2 +  63665305 T--G
i Canis_lupus_orion.HG994398.1                           C 0 T 84
s Capra_aegagrus.CM003241.1                               18829290 2 +  46296322 T--G
i Capra_aegagrus.CM003241.1                              C 0 T 83
s Capra_hircus.CM004588.1                                 18060010 2 -  44709034 T--G
i Capra_hircus.CM004588.1                                C 0 T 83
s Carlito_syrichta.NW_007259797.1                           141053 2 -    496798 T--G
i Carlito_syrichta.NW_007259797.1                        C 0 T 83
s Carollia_perspicillata.CarPer_scaffold_92756                2891 2 -     11696 T--G
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 T 83
s Castor_canadensis.CasCan_scaffold_2074                    133656 2 +    179628 T--G
i Castor_canadensis.CasCan_scaffold_2074                 C 0 T 80
s Catagonus_wagneri.CatWag_scaffold_2839                     89264 2 +    217609 T--G
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 T 124
s Cavia_aperea.AVPZ01000300.1                             18347477 2 -  23392119 T--G
i Cavia_aperea.AVPZ01000300.1                            C 0 T 82
s Cavia_porcellus.DS562891.1                              18359737 2 -  23407841 T--G
i Cavia_porcellus.DS562891.1                             C 0 T 82
s Cavia_tschudii.CavTsc_scaffold_8919                        98612 2 +    143979 T--G
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 T 82
s Cephalopachus_bancanus.k141_2037105                         4969 2 -      8605 T--G
i Cephalopachus_bancanus.k141_2037105                    C 0 T 83
s Ceratotherium_simum.JH767749.1                          12227889 2 +  27778364 T--G
i Ceratotherium_simum.JH767749.1                         C 0 T 83
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2607 2 -      3715 T--G
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 T 83
s Cercocebus_atys.KQ010504.1                               4470293 2 +   4669795 T--G
i Cercocebus_atys.KQ010504.1                             C 0 T 77
s Cercocebus_chrysogaster.k141_393940                         8842 2 -     19203 T--G
i Cercocebus_chrysogaster.k141_393940                    C 0 T 77
s Cercocebus_lunulatus.k141_3846941                           3261 2 +      8260 T--G
i Cercocebus_lunulatus.k141_3846941                      C 0 T 77
s Cercocebus_torquatus.k141_3057011                           3491 2 +     27781 T--G
i Cercocebus_torquatus.k141_3057011                      C 0 T 77
s Cercopithecus_ascanius.k141_1024104                         3637 2 -     20310 T--G
i Cercopithecus_ascanius.k141_1024104                    C 0 T 77
s Cercopithecus_cephus.k141_1078548                           6621 2 +     29689 T--G
i Cercopithecus_cephus.k141_1078548                      C 0 T 77
s Cercopithecus_diana.k141_2427854                             974 2 +      9989 T--G
i Cercopithecus_diana.k141_2427854                       C 0 T 77
s Cercopithecus_hamlyni.k141_187466                           9309 2 -     27936 T--G
i Cercopithecus_hamlyni.k141_187466                      C 0 T 77
s Cercopithecus_lowei.k141_457449                             9328 2 -     11289 T--G
i Cercopithecus_lowei.k141_457449                        C 0 T 77
s Cercopithecus_albogularis.ctg5                                38811704 2 +  39242232 T--G
i Cercopithecus_albogularis.ctg5                               C 0 T 77
s Cercopithecus_mona.ctg39                                21217395 2 -  21565898 T--G
i Cercopithecus_mona.ctg39                               C 0 T 77
s Cercopithecus_neglectus.k141_2526306                       34515 2 -     53127 T--G
i Cercopithecus_neglectus.k141_2526306                   C 0 T 77
s Cercopithecus_nictitans.k141_3278028                        1807 2 +      7159 T--G
i Cercopithecus_nictitans.k141_3278028                   C 0 T 77
s Cercopithecus_petaurista.k141_807961                        9320 2 -     27947 T--G
i Cercopithecus_petaurista.k141_807961                   C 0 T 77
s Cercopithecus_pogonias.k141_822820                          9296 2 +     17596 T--G
i Cercopithecus_pogonias.k141_822820                     C 0 T 77
s Cercopithecus_roloway.k141_3180641                         39790 2 -     41420 T--G
i Cercopithecus_roloway.k141_3180641                     C 0 T 77
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4814 2 -      6351 T--G
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 T 68
s Cheirogaleus_major.k141_333249                             16724 2 -     52598 T--G
i Cheirogaleus_major.k141_333249                         C 0 T 66
s Cheirogaleus_medius.k141_1055463                           12073 2 +     57038 T--G
i Cheirogaleus_medius.k141_1055463                       C 0 T 66
s Chinchilla_lanigera.JH722012.1                           1248507 2 +   2543920 T--G
i Chinchilla_lanigera.JH722012.1                         C 0 T 80
s Chlorocebus_aethiops.ctg25                              18423259 2 -  18827391 T--G
i Chlorocebus_aethiops.ctg25                             C 0 T 77
s Chlorocebus_pygerythrus.k141_1025673                        9702 2 -     50209 T--G
i Chlorocebus_pygerythrus.k141_1025673                   C 0 T 77
s Chlorocebus_sabaeus.CM001947.1                         135416707 2 + 135778131 T--G
i Chlorocebus_sabaeus.CM001947.1                         C 0 T 77
s Choloepus_didactylus.ChoDid_scaffold_45914                 15173 2 +     19366 T--G
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 T 87
s Choloepus_hoffmanni.KN194906.1                            170272 2 +    839153 T--G
i Choloepus_hoffmanni.KN194906.1                         C 0 T 87
s Colobus_angolensis.KN981557.1                            1905236 2 +   2368649 T--G
i Colobus_angolensis.KN981557.1                          C 0 T 77
s Colobus_guereza.LG01                                   199944906 2 + 200372422 T--G
i Colobus_guereza.LG01                                   C 0 T 129
s Colobus_polykomos.k141_906115                              31775 2 +     84244 T--G
i Colobus_polykomos.k141_906115                          C 0 T 104
s Condylura_cristata.JH655891.1                           17545997 2 -  53390261 T--G
i Condylura_cristata.JH655891.1                          C 0 T 82
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10507 2 -     20389 T--G
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 T 80
s Crocidura_indochinensis.CroInd_scaffold_287352               378 1 +      4208 ---G
i Crocidura_indochinensis.CroInd_scaffold_287352         I 12 T 52
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24233 2 -     87169 T--G
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 T 65
s Cuniculus_paca.CunPac_flattened_line_231100                 2862 2 +      5455 T--G
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 T 83
s Dasyprocta_punctata.DasPun_flattened_line_206793            1245 2 +      3576 T--G
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 T 83
s Dasypus_novemcinctus.JH564415.1                            61084 2 +   2246927 T--G
i Dasypus_novemcinctus.JH564415.1                        C 0 T 85
s Daubentonia_madagascariensis.ctg71                      12532894 2 -  12879189 T--G
i Daubentonia_madagascariensis.ctg71                     C 0 T 70
s Delphinapterus_leucas.KZ290073.1                        16811193 2 +  35494412 T--G
i Delphinapterus_leucas.KZ290073.1                       C 0 T 83
s Desmodus_rotundus.KZ672289.1                             8627922 2 +  20541912 T--G
i Desmodus_rotundus.KZ672289.1                           C 0 T 83
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669422 2 +   1390856 T--G
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 T 83
s Diceros_bicornis.DicBicMic_scaffold_5955                    2497 2 +    198055 T--G
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 T 83
s Dinomys_branickii.DinBra_scaffold_21862                    34285 2 +     67921 T--G
i Dinomys_branickii.DinBra_scaffold_21862                C 0 T 77
s Dipodomys_ordii.KN672350.1                              18895818 2 +  37912305 C--A
i Dipodomys_ordii.KN672350.1                             C 0 T 83
s Dipodomys_stephensi.DipSte_scaffold_75855                  12028 2 +     14536 C--A
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 T 83
s Dolichotis_patagonum.DolPat_scaffold_30833                 31502 2 -     42551 T--G
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 T 83
s Eidolon_helvum.KE759718.1                                   7428 2 +     11740 T--G
i Eidolon_helvum.KE759718.1                              C 0 T 82
s Elaphurus_davidianus.JRFZ01104969.1                       310294 2 +    607251 T--G
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 T 83
s Elephantulus_edwardii.JH947257.1                         1089016 2 +  10337057 T--G
i Elephantulus_edwardii.JH947257.1                       C 0 T 82
s Enhydra_lutris.KZ291758.1                               16325781 2 -  41312741 T--G
i Enhydra_lutris.KZ291758.1                              C 0 T 81
s Eptesicus_fuscus.JH977646.1                              2144079 2 -  14770903 T--G
i Eptesicus_fuscus.JH977646.1                            C 0 T 83
s Equus_asinus.JREZ01000139.1                              1279764 2 +   4378816 T--G
i Equus_asinus.JREZ01000139.1                            C 0 T 83
s Equus_caballus.CM000403.2                               18527585 2 -  39960074 T--G
i Equus_caballus.CM000403.2                              C 0 T 83
s Equus_przewalskii.KK951119.1                               29600 2 +    498745 T--G
i Equus_przewalskii.KK951119.1                           C 0 T 83
s Erinaceus_europaeus.JH835339.1                           3325353 2 -   7059049 T--G
i Erinaceus_europaeus.JH835339.1                         C 0 T 79
s Erythrocebus_patas.Contig38                             21199938 2 -  21539334 T--G
i Erythrocebus_patas.Contig38                            C 0 T 77
s Eschrichtius_robustus.EscRob_flattened_line_8968           10869 2 +    133382 T--G
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 T 83
s Eubalaena_japonica.EubJap_flattened_line_31514             24806 2 -     44125 T--G
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 T 83
s Felis_catus.AANG03299807.1                                   410 2 -       507 T--G
i Felis_catus.AANG03299807.1                             C 0 T 65
s Felis_catus_fca126.CM031415.1                           20191988 2 + 205367284 T--G
i Felis_catus_fca126.CM031415.1                          C 0 T 65
s Felis_nigripes.FelNig_flattened_line_20823                  5513 2 -     36744 T--G
i Felis_nigripes.FelNig_flattened_line_20823             C 0 T 65
s Fukomys_damarensis.KN121974.1                             848512 2 +   3816255 T--G
i Fukomys_damarensis.KN121974.1                          C 0 T 83
s Galagoides_demidoff.k141_31856                              3210 2 -      3432 a--a
i Galagoides_demidoff.k141_31856                         C 0 T 81
s Galeopterus_variegatus.GalVar_scaffold_56069               25476 2 +     26054 T--G
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 T 83
s Glis_glis.GliGli_scaffold_19807                            30361 2 +     49224 C--A
i Glis_glis.GliGli_scaffold_19807                        C 0 T 77
s Gorilla_beringei.k141_3596273                              10427 4 -     32273 TATG
i Gorilla_beringei.k141_3596273                          T 140 T 156
s Gorilla_gorilla.LT578341.1                             186332577 4 + 186649187 TATG
i Gorilla_gorilla.LT578341.1                             T 140 T 140
s Graphiurus_murinus.GraMur_scaffold_10447                   30089 1 +     78134 C---
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 T 75
s Helogale_parvula.HelPar_flattened_line_2585               238150 2 +    327341 T--G
i Helogale_parvula.HelPar_flattened_line_2585            C 0 T 65
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17494 2 +     36099 T--G
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 T 83
s Heterocephalus_glaber.JH602082.1                        20659391 2 +  22651954 T--G
i Heterocephalus_glaber.JH602082.1                       C 0 T 83
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 253 2 +       961 T--G
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 T 82
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112049 2 +    128679 T--G
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 T 83
s Hipposideros_armiger.JXIK01000431.1                       108387 2 +   1711038 T--G
i Hipposideros_armiger.JXIK01000431.1                    C 0 T 82
s Hipposideros_galeritus.HipGal_scaffold_29171               39828 2 +     43066 T--G
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 T 82
s Hoolock_leuconedys.ctg274                                    429266 2 +    630532 T--G
i Hoolock_leuconedys.ctg274                                 T 202 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40615 2 +     55795 T--G
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 T 65
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19860 2 -    143317 T--G
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 T 83
s Hylobates_agilis.k141_307679                               12389 2 -     15490 T--G
i Hylobates_agilis.k141_307679                           C 0 T 205
s Hylobates_klossii.k141_282416                              54394 2 +     67168 T--G
i Hylobates_klossii.k141_282416                          C 0 T 205
s Hylobates_pileatus_b.LG02                                     189538046 2 - 191637585 T--G
i Hylobates_pileatus_b.LG02                                     C 0 T 410
s Hylobates_pileatus_a.tarseq_633                            3330939 2 -  11177569 T--G
i Hylobates_pileatus_a.tarseq_633                          C 0 T 205
s Hystrix_cristata.HysCri_scaffold_5660                      80934 2 +    135385 T--G
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 T 83
s Ictidomys_tridecemlineatus.JH393364.1                    7514596 2 -   7955117 C--A
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 T 78
s Indri_indri.k141_3655594                                   18166 2 +     31101 T--G
i Indri_indri.k141_3655594                               C 0 T 70
s Inia_geoffrensis.IniGeo_flattened_line_48101               22410 2 +     23964 T--G
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 T 83
s Jaculus_jaculus.JH725527.1                               8271381 2 -   9596543 T--G
i Jaculus_jaculus.JH725527.1                             C 0 T 87
s Kogia_breviceps.KogBre_flattened_line_192630                1677 2 -      3359 T--G
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 T 83
s Lasiurus_borealis.LasBor_scaffold_32767                    12258 2 -     42476 T--G
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 T 85
s Lepilemur_ankaranensis.k141_596936                          6800 2 -     23766 T--G
i Lepilemur_ankaranensis.k141_596936                     C 0 T 70
s Lepilemur_dorsalis.k141_577674                             24747 2 +     45836 T--G
i Lepilemur_dorsalis.k141_577674                         C 0 T 70
s Lepilemur_ruficaudatus.k141_420445                         31658 2 -     32627 T--G
i Lepilemur_ruficaudatus.k141_420445                     C 0 T 70
s Lepilemur_septentrionalis.k141_185316                      22802 2 +     54090 T--G
i Lepilemur_septentrionalis.k141_185316                  C 0 T 70
s Leptonychotes_weddellii.KB714746.1                       3036117 2 +   3914936 T--G
i Leptonychotes_weddellii.KB714746.1                     C 0 T 84
s Lipotes_vexillifer.KE559953.1                             267488 2 -    662738 T--G
i Lipotes_vexillifer.KE559953.1                          C 0 T 80
s Lophocebus_aterrimus.ctg367                              1431464 2 +   1826925 T--G
i Lophocebus_aterrimus.ctg367                            C 0 T 78
s Loris_lydekkerianus.k141_2539221                             694 2 +     11245 T--A
i Loris_lydekkerianus.k141_2539221                       C 0 T 65
s Loris_tardigradus.ctg83                                   999530 2 +   6120653 T--A
i Loris_tardigradus.ctg83                                C 0 T 66
s Loxodonta_africana.GL010049.1                            4214526 2 -  43346337 T--G
i Loxodonta_africana.GL010049.1                          C 0 T 82
s Lycaon_pictus.CM007581.1                                17951734 2 -  59628241 T--G
i Lycaon_pictus.CM007581.1                               C 0 T 84
s Macaca_arctoides.k141_2326796                               1648 2 +     40492 T--G
i Macaca_arctoides.k141_2326796                          C 0 T 77
s Macaca_assamensis.Contig5                               59670908 2 +  60120075 T--G
i Macaca_assamensis.Contig5                              C 0 T 77
s Macaca_cyclopis.k119_18836                                  7406 2 -     26193 T--G
i Macaca_cyclopis.k119_18836                             C 0 T 77
s Macaca_fascicularis.k141_814140                            75200 2 -    114318 T--G
i Macaca_fascicularis.k141_814140                        C 0 T 77
s Macaca_fuscata.k119_255327                                   919 2 -     23192 T--G
i Macaca_fuscata.k119_255327                             C 0 T 77
s Macaca_leonina.k141_3550399                                10372 2 -     29190 T--G
i Macaca_leonina.k141_3550399                            C 0 T 77
s Macaca_maura.k141_2733130                                  18939 2 +     37952 T--G
i Macaca_maura.k141_2733130                              C 0 T 77
s Macaca_mulatta.NC_041758.1                             186834027 2 + 187317192 T--G
i Macaca_mulatta.NC_041758.1                             C 0 T 77
s Macaca_nemestrina.KQ007038.1                            25452588 2 -  25927173 T--G
i Macaca_nemestrina.KQ007038.1                           C 0 T 77
s Macaca_nigra.k141_1655396                                  74788 2 +     89720 T--G
i Macaca_nigra.k141_1655396                              C 0 T 77
s Macaca_radiata.k141_3680011                                 1785 2 +     20474 T--G
i Macaca_radiata.k141_3680011                            C 0 T 77
s Macaca_siberu.k141_635500                                   1586 2 -     14993 T--G
i Macaca_siberu.k141_635500                              C 0 T 77
s Macaca_silenus.Contig273                                  324459 2 -    668171 T--G
i Macaca_silenus.Contig273                               C 0 T 77
s Macaca_thibetana.k99_7456                                  15728 2 -     15935 T--G
i Macaca_thibetana.k99_7456                              C 0 T 77
s Macaca_tonkeana.k141_1498238                               20525 2 -     45290 T--G
i Macaca_tonkeana.k141_1498238                           C 0 T 77
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87574 2 +     94391 T--G
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 T 81
s Mandrillus_leucophaeus.scaffold280                      23932080 2 -  24302211 T--G
i Mandrillus_leucophaeus.scaffold280                     C 0 T 77
s Mandrillus_sphinx.Contig270                               346258 2 +    752769 T--G
i Mandrillus_sphinx.Contig270                            C 0 T 77
s Manis_javanica.JSZB01003497.1                              15619 2 +    737560 T--G
i Manis_javanica.JSZB01003497.1                          C 0 T 81
s Manis_pentadactyla.KN006162.1                              47008 2 -    317179 T--G
i Manis_pentadactyla.KN006162.1                          C 0 T 81
s Marmota_marmota.CZRN01000018.1                          33097446 2 -  40650429 C--A
i Marmota_marmota.CZRN01000018.1                         C 0 T 78
s Megaderma_lyra.MegLyr_scaffold_4542                         6789 2 -    207569 T--A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 T 64
s Mellivora_capensis.MelCap_flattened_line_69365              6248 2 +     13704 T--G
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 T 84
s Mesoplodon_bidens.MesBid_scaffold_108144                    3078 2 +     10310 T--G
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 T 83
s Microcebus_murinus.CM007674.1                           18283326 2 -  93316391 T--G
i Microcebus_murinus.CM007674.1                          C 0 T 70
s Micronycteris_hirsuta.MicHir_scaffold_52381                13433 2 -     19307 T--G
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 T 83
s Miniopterus_natalensis.LDJU01000034.1                    1849107 2 +   8254450 T--G
i Miniopterus_natalensis.LDJU01000034.1                  C 0 T 83
s Miniopterus_schreibersii.MinSch_scaffold_18080             32983 2 +     64694 T--G
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 T 83
s Miopithecus_ogouensis.k141_534055                           3815 2 -     28506 T--G
i Miopithecus_ogouensis.k141_534055                      C 0 T 77
s Mirounga_angustirostris.MirAng_flattened_line_22144        62447 2 -     63350 T--G
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 T 84
s Mirza_zaza.k141_952172                                      4680 2 -     37649 T--G
i Mirza_zaza.k141_952172                                 C 0 T 69
s Monodon_monoceros.MonMon_M_scaffold_103                    26583 2 -    437263 T--G
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 T 83
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137839 2 -    366855 T--G
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 T 83
s Moschus_moschiferus.MosMos_scaffold_61429                  27432 2 -     27816 T--G
i Moschus_moschiferus.MosMos_scaffold_61429              C 0 T 81
s Mungos_mungo.MunMun_flattened_line_23663                   31351 2 +     37127 T--G
i Mungos_mungo.MunMun_flattened_line_23663               C 0 T 65
s Murina_feae.MurFea_scaffold_85699                           5133 2 +     14753 T--G
i Murina_feae.MurFea_scaffold_85699                      C 0 T 74
s Muscardinus_avellanarius.MusAve_scaffold_82313              2354 2 +     14296 C--T
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 T 77
s Mustela_putorius.JH418006.1                               297679 2 -  14710649 T--G
i Mustela_putorius.JH418006.1                            C 0 T 84
s Myotis_brandtii.KE162005.1                                278303 2 -  10118263 T--G
i Myotis_brandtii.KE162005.1                             C 0 T 72
s Myotis_davidii.KB100139.1                                1585860 2 -   6019432 T--G
i Myotis_davidii.KB100139.1                              C 0 T 72
s Myotis_lucifugus.GL429869.1                              3902069 2 -   4330536 T--G
i Myotis_lucifugus.GL429869.1                            C 0 T 72
s Myotis_myotis.MyoMyo_scaffold_28916                        32628 2 +     33610 T--G
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 T 72
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186124 2 +    196477 T--G
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 T 87
s Nannospalax_galili.KL204047.1                            2025522 2 -   3037898 T--G
i Nannospalax_galili.KL204047.1                          C 0 T 76
s Nasalis_larvatus.k141_413338                                9828 2 +     21681 T--G
i Nasalis_larvatus.k141_413338                           C 0 T 77
s Neophocaena_asiaeorientalis.KZ687982.1                   5865539 2 +   7148211 T--G
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 T 83
s Noctilio_leporinus.NocLep_scaffold_251                    756403 2 +    783361 T--G
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 T 82
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145995 2 -   9404916 T--G
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 T 84
s Nycticebus_bengalensis.LG01                            102574498 2 - 196305487 T--A
i Nycticebus_bengalensis.LG01                            C 0 T 65
s Nycticebus_coucang.k141_5327727                             2184 2 +      8486 T--A
i Nycticebus_coucang.k141_5327727                        C 0 T 65
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744925 2 + 199412804 T--A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 T 65
s Ochotona_princeps.JH802162.1                             1355763 2 +   3988456 T--C
i Ochotona_princeps.JH802162.1                           C 0 T 71
s Odobenus_rosmarus.KB229312.1                              500736 2 -   2017862 T--G
i Odobenus_rosmarus.KB229312.1                           C 0 T 84
s Odocoileus_virginianus.KZ100018.1                         144666 2 +    630418 T--G
i Odocoileus_virginianus.KZ100018.1                      C 0 T 82
s Orcinus_orca.KB316932.1                                  2781454 2 -  10937097 T--G
i Orcinus_orca.KB316932.1                                C 0 T 83
s Orycteropus_afer.OryAfe_flattened_line_144387               6851 2 -     18566 A--G
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 T 82
s Otocyon_megalotis.JAEUCK010005147.1                       458749 2 -    559221 T--G
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 T 84
s Ovis_aries.CM001607.2                                   17585025 2 +  44047080 T--G
i Ovis_aries.CM001607.2                                  C 0 T 83
s Ovis_canadensis.OviCan_scaffold_2572                      173446 2 -    191736 T--G
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 T 83
s Pan_paniscus.KQ411613.1                                    38615 4 +     80009 tata
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189137371 4 + 189151597 tatg
i Pan_troglodytes.CM009242.2                             I 206 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  147135 2 +    230217 T--G
i Panthera_onca.PanOnc_flattened_line_3271               C 0 T 65
s Panthera_pardus.KV860321.1                                259844 2 +  18783137 T--G
i Panthera_pardus.KV860321.1                             C 0 T 65
s Panthera_tigris.KE722367.1                               4716991 2 -   8748460 T--G
i Panthera_tigris.KE722367.1                             C 0 T 65
s Pantholops_hodgsonii.KE114653.1                          1264379 2 -   2937107 T--G
i Pantholops_hodgsonii.KE114653.1                        C 0 T 83
s Papio_anubis.CM001495.2                                183437402 2 + 183742232 T--G
i Papio_anubis.CM001495.2                                C 0 T 77
s Papio_cynocephalus.k141_4307930                             1560 2 +     20448 T--G
i Papio_cynocephalus.k141_4307930                        C 0 T 170
s Papio_hamadryas.Contig39                                20558086 2 +  20919399 T--G
i Papio_hamadryas.Contig39                               C 0 T 77
s Papio_kindae.k141_1936966                                    303 2 +     41871 T--G
i Papio_kindae.k141_1936966                              C 0 T 170
s Papio_papio.k141_802527                                     3589 2 +     27711 T--G
i Papio_papio.k141_802527                                C 0 T 59
s Papio_ursinus.k141_3428135                                  3488 2 +      9205 T--G
i Papio_ursinus.k141_3428135                             C 0 T 77
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8870 2 -     78924 T--G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 T 65
s Perodicticus_ibeanus.k141_855320                            4680 2 +     13100 T--A
i Perodicticus_ibeanus.k141_855320                       C 0 T 70
s Perodicticus_potto.k141_1092580                             3048 2 +     25941 T--A
i Perodicticus_potto.k141_1092580                        C 0 T 70
s Petromus_typicus.PetTyp_scaffold_42190                     25858 2 -     29689 T--G
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 T 81
s Phocoena_phocoena.PhoPho_flattened_line_24159               8501 2 +     63832 T--G
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 T 83
s Piliocolobus_badius.k141_1234363                           38344 2 +     62158 T--G
i Piliocolobus_badius.k141_1234363                       C 0 T 77
s Piliocolobus_gordonorum.k141_381342                        33071 2 +     89929 T--G
i Piliocolobus_gordonorum.k141_381342                    C 0 T 77
s Piliocolobus_kirkii.k141_448987                            34487 2 +     51399 T--G
i Piliocolobus_kirkii.k141_448987                        C 0 T 77
s Piliocolobus_tephrosceles.PDMG02000141.1                14290708 2 -  14605196 T--G
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 T 77
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              453 2 +     22620 T--G
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 T 83
s Platanista_gangetica.PlaMin_flattened_line_32310           34207 2 +     35617 T--G
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 T 83
s Pongo_abelii.CM009266.2                                189125556 4 + 189387572 TATG
i Pongo_abelii.CM009266.2                                T 205 T 309
s Pongo_pygmaeus.ctg66                                     9565159 4 +   9816681 TATG
i Pongo_pygmaeus.ctg66                                   T 206 C 0
s Presbytis_comata.k141_677006                               67988 2 -     81375 T--G
i Presbytis_comata.k141_677006                           C 0 T 77
s Presbytis_mitrata.k141_2342859                              9815 2 +     10147 T--G
i Presbytis_mitrata.k141_2342859                         C 0 T 77
s Procavia_capensis.ProCapCap_scaffold_85530                 10014 2 -     22811 T--G
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 T 82
s Propithecus_coquerelli.NW_012148875.1                     986377 2 +   2598838 T--A
i Propithecus_coquerelli.NW_012148875.1                  C 0 T 67
s Propithecus_coronatus.k141_347390                          24666 2 +     38485 T--A
i Propithecus_coronatus.k141_347390                      C 0 T 67
s Propithecus_diadema.k141_357118                              827 2 +      4256 T--A
i Propithecus_diadema.k141_357118                        C 0 T 67
s Propithecus_edwardsi.k141_1176054                          22185 2 +     35766 T--A
i Propithecus_edwardsi.k141_1176054                      C 0 T 67
s Propithecus_perrieri.k141_1200571                            368 2 -     24134 T--A
i Propithecus_perrieri.k141_1200571                      C 0 T 67
s Propithecus_tattersalli.k141_790011                        24180 2 -     67325 T--A
i Propithecus_tattersalli.k141_790011                    C 0 T 67
s Propithecus_verreauxi.k141_956661                            425 2 -      6182 T--A
i Propithecus_verreauxi.k141_956661                      C 0 T 67
s Pteronotus_parnellii.KE909381.1                            11226 2 -     21811 T--G
i Pteronotus_parnellii.KE909381.1                        C 0 T 88
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36690 2 +     42204 T--G
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 T 84
s Pteropus_alecto.KB030862.1                              22973697 2 +  28871421 T--G
i Pteropus_alecto.KB030862.1                             C 0 T 81
s Pteropus_vampyrus.KN534172.1                                1634 2 -      8028 T--G
i Pteropus_vampyrus.KN534172.1                           C 0 T 81
s Puma_concolor.QAVW01001104.1                            20270302 2 -  38429054 T--G
i Puma_concolor.QAVW01001104.1                           C 0 T 65
s Pygathrix_cinerea.k141_1153803                              9817 2 -     91421 T--G
i Pygathrix_cinerea.k141_1153803                         C 0 T 77
s Pygathrix_nigripes_b.ctg100                                 7603951 2 +   7812017 T--G
i Pygathrix_nigripes_b.ctg100                               C 0 T 77
s Pygathrix_nigripes_a.k141_215492                              9790 2 -     72585 T--G
i Pygathrix_nigripes_a.k141_215492                         C 0 T 77
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4914 2 +     55207 T--G
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 T 82
s Rhinolophus_sinicus.LVEH01000134.1                        366932 2 -   3329780 T--G
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 T 83
s Rhinopithecus_bieti.k119_217274                             1503 2 -     11128 t--g
i Rhinopithecus_bieti.k119_217274                        C 0 T 377
s Rhinopithecus_roxellana.NC_044550.1                     91230860 2 - 195417433 t--g
i Rhinopithecus_roxellana.NC_044550.1                    C 0 T 357
s Rhinopithecus_strykeri.ctg102                            7666508 2 +   7961872 t--g
i Rhinopithecus_strykeri.ctg102                          C 0 T 297
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84683 2 -     96226 T--G
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 T 82
s Saiga_tatarica.SaiTat_scaffold_373180                       3567 2 +      4321 T--G
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 T 82
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151379 2 -    313613 T--G
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 T 45
s Semnopithecus_entellus.k141_11662                          14332 2 -     19888 T--G
i Semnopithecus_entellus.k141_11662                      C 0 T 77
s Semnopithecus_hypoleucos.k141_1615806                      21537 2 +     39453 T--G
i Semnopithecus_hypoleucos.k141_1615806                  C 0 T 77
s Semnopithecus_johnii.k141_670120                            2061 2 +     27826 T--G
i Semnopithecus_johnii.k141_670120                       C 0 T 77
s Semnopithecus_priam.k141_638794                             1583 2 -     19483 T--G
i Semnopithecus_priam.k141_638794                        C 0 T 77
s Semnopithecus_schistaceus.k141_1584426                      1645 2 +      7198 T--G
i Semnopithecus_schistaceus.k141_1584426                 C 0 T 77
s Semnopithecus_vetulus.k141_1200928                          9905 2 +     15514 T--G
i Semnopithecus_vetulus.k141_1200928                     C 0 T 77
s Solenodon_paradoxus.SolPar_flattened_line_5840            187704 2 -    191337 T--G
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 T 83
s Sorex_araneus.JH798187.1                                13647034 2 -  18376816 T--G
i Sorex_araneus.JH798187.1                               C 0 T 64
s Spermophilus_dauricus.KZ294078.1                         1948238 2 -   3870691 C--A
i Spermophilus_dauricus.KZ294078.1                       C 0 T 78
s Spilogale_gracilis.SpiGra_flattened_line_13525             27232 2 +     97271 T--G
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 T 83
s Suricata_suricatta.SurSur_flattened_line_6629              14220 2 -    196729 T--A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 T 65
s Sus_scrofa.CM000828.4                                   62882473 2 -  69701581 T--G
i Sus_scrofa.CM000828.4                                  C 0 T 70
s Symphalangus_syndactylus.tarseq_199                      1088087 2 -   1523678 T--G
i Symphalangus_syndactylus.tarseq_199                    C 0 T 206
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6836 2 +     41958 T--G
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 T 82
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69486 2 +    116680 T--G
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 T 87
s Tapirus_indicus.TapInd_scaffold_9301                      115219 2 -    156842 T--G
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 T 83
s Tapirus_terrestris.TapTer_scaffold_755                    383674 2 +    539355 T--G
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 T 83
s Tarsius_lariang.k141_2201908                               10668 2 +     70052 T--G
i Tarsius_lariang.k141_2201908                           C 0 T 83
s Tarsius_wallacei.k141_780063                               14973 2 +     25099 T--G
i Tarsius_wallacei.k141_780063                           C 0 T 83
s Theropithecus_gelada.CM009954.1                        186422911 2 + 186847797 T--G
i Theropithecus_gelada.CM009954.1                        C 0 T 77
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103200 2 +    114563 T--G
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 T 82
s Tolypeutes_matacus.TolMat_scaffold_228639                   1872 2 +      8208 T--G
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 T 68
s Tonatia_saurophila.TonSau_scaffold_294                     78977 2 +    610378 T--G
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 T 83
s Trachypithecus_auratus.k141_722599                          5639 2 -     20410 T--G
i Trachypithecus_auratus.k141_722599                     C 0 T 74
s Trachypithecus_crepusculus.k141_1194022                     9834 2 +     15221 T--G
i Trachypithecus_crepusculus.k141_1194022                C 0 T 77
s Trachypithecus_cristatus.k141_580354                        5739 2 +     19930 T--G
i Trachypithecus_cristatus.k141_580354                   C 0 T 74
s Trachypithecus_francoisi.k141_1412647                       2169 2 -     19997 T--G
i Trachypithecus_francoisi.k141_1412647                  C 0 T 77
s Trachypithecus_geei.k141_277701                            42288 2 -     60166 T--G
i Trachypithecus_geei.k141_277701                        C 0 T 77
s Trachypithecus_germaini.k141_912491                         9760 2 -     27529 T--G
i Trachypithecus_germaini.k141_912491                    C 0 T 77
s Trachypithecus_hatinhensis.k141_143409                      9700 2 -     18194 T--G
i Trachypithecus_hatinhensis.k141_143409                 C 0 T 77
s Trachypithecus_laotum.k141_907409                           3436 2 -     21137 T--G
i Trachypithecus_laotum.k141_907409                      C 0 T 77
s Trachypithecus_leucocephalus.k141_587342                    2138 2 -     10723 T--T
i Trachypithecus_leucocephalus.k141_587342               C 0 T 77
s Trachypithecus_melamera.k141_434728                         1291 2 +      9834 T--G
i Trachypithecus_melamera.k141_434728                    C 0 T 77
s Trachypithecus_obscurus.k141_190785                        19609 2 +     32220 T--G
i Trachypithecus_obscurus.k141_190785                    C 0 T 77
s Trachypithecus_phayrei.ctg124                            5933706 2 +   6242583 T--G
i Trachypithecus_phayrei.ctg124                          C 0 T 77
s Trachypithecus_pileatus.k141_2007326                        2951 2 +     20839 T--G
i Trachypithecus_pileatus.k141_2007326                   C 0 T 77
s Tragulus_javanicus.TraJav_scaffold_140459                    684 2 -      1748 T--G
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 T 71
s Tupaia_chinensis.KB320699.1                              2149630 2 +   4065304 T--G
i Tupaia_chinensis.KB320699.1                            C 0 T 109
s Tupaia_tana.TupTan_flattened_line_97126                     3221 2 -     10553 T--G
i Tupaia_tana.TupTan_flattened_line_97126                C 0 T 81
s Tursiops_truncatus.MRVK01000835.1                       15737701 2 +  33153633 T--G
i Tursiops_truncatus.MRVK01000835.1                      C 0 T 83
s Uropsilus_gracilis.UroGra_scaffold_97021                    1932 2 -      4736 G--G
i Uropsilus_gracilis.UroGra_scaffold_97021               C 0 T 83
s Ursus_maritimus.KK499267.1                               4846933 2 -   5085361 T--G
i Ursus_maritimus.KK499267.1                             C 0 T 84
s Vicugna_pacos.KN270157.1                                 5368405 2 -   5488506 T--G
i Vicugna_pacos.KN270157.1                               C 0 T 83
s Vulpes_lagopus.VulLag_flattened_line_30954                  7410 2 -     43706 T--G
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 T 84
s Xerus_inauris.XerIna_scaffold_48378                        19733 2 -     24430 C--A
i Xerus_inauris.XerIna_scaffold_48378                    C 0 T 78
s Zalophus_californianus.ZalCal_flattened_line_63728          1858 2 +      2932 T--G
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 T 84
s Zapus_hudsonius.ZapHud_scaffold_11398                      10014 2 +     63895 T--G
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 T 86
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11393 2 +     12536 T--G
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 T 83
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Varecia_variegata.k141_1128296                              7155 0 +     24756 C
e Varecia_rubra.k141_590885                                   7107 0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414 0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25316 22 +     32600 T
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    15418 9 -    145209 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Lemur_catta.scaffold_24                                 15519761 0 -  30322482 C
e Hapalemur_occidentalis.k141_907772                          9234 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402 0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298 0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517 0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                               9432 0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267 0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247 0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321 0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369 0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369 0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184 0 -     25546 C
e Eulemur_collaris.k141_377015                                2154 0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453 0 -     14127 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                        853 52 +     62944 TTGGAGGAACTCTAT-AA-TGAATCACAGGAAACAGAATGATTC-----TATTGTCACA
s Gorilla_beringei.k141_2022027                               1781 53 +      3305 TTACAGGAAGTCTATAAA-TGAATCACATGACACAGAATGGTTC-----CATTGTCACC
i Gorilla_beringei.k141_2022027                          I 2 I 32
s Gorilla_gorilla.CYUI03002401.1                              6004 53 +      7071 ttacaggaagtctataaa-tgaatcacatgacacagaatggttc-----cattgtcacc
i Gorilla_gorilla.CYUI03002401.1                         I 2 C 0
s Hoolock_leuconedys.ctg274                                    429268 52 +    630532 TTAGAGAAACTCTAT-AA-TGAATCACATGAAACAGAATTATTC-----CGTTGTCACC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_307679                               12186 52 -     15490 TTAGAGGAACTCTAT-AA-CAAATCAAATGAAACAGAATGGTTC-----CGTTGTCACC
i Hylobates_agilis.k141_307679                           T 205 C 0
s Hylobates_klossii.k141_282416                              54191 52 +     67168 TTAGAGGAACTCTAT-AA-CGAATCAAATGAAACAGAATGGATC-----CGTTGTCACC
i Hylobates_klossii.k141_282416                          T 205 C 0
s Hylobates_pileatus_b.LG02                                     189537638 52 - 191637585 tTAGAGAAACTCTAT-AA-CGAATCAAATGAAAAAGAATGGTTC-----CGTTGTCACC
i Hylobates_pileatus_b.LG02                                     T 410 I 205
s Hylobates_pileatus_a.tarseq_633                            3330736 52 -  11177569 TTAGAGAAACTCTAT-AA-TGAATCACATGAAACAGAGTGGTTC-----CATTGTCACC
i Hylobates_pileatus_a.tarseq_633                          T 205 C 0
s Pan_paniscus.KQ411613.1                                    38619 53 +     80009 ttagaggaactctat-aaatgaatcacatgaaacagaatggttc-----cgttgtcacc
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189137375 53 + 189151597 ttagagaaactctac-aaatgaatcacatgaaacagaatgattc-----cgttgtcacc
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Pongo_abelii.CM009266.2                                189125251 52 + 189387572 TTAGAGGAACTCTAT-GA-TGAATCACATGAAACAGAGTGGTTC-----CGTTGTCACT
i Pongo_abelii.CM009266.2                                T 309 I 309
s Pongo_pygmaeus.ctg66                                     9565163 53 +   9816681 TTAGAGGATCTCTAT-AAATGAATCACATGAAACAGAGTGGTTC-----CGTTGTCACT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1087883 52 -   1523678 TTAGAGAAACTCTAT-AA-TGAATCACATGAAACGGAATGGTTC-----CATTGTCACC
i Symphalangus_syndactylus.tarseq_199                    T 206 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Loris_tardigradus.ctg83                                   999532 66 +   6120653 T
e Loris_lydekkerianus.k141_2539221                             696 65 +     11245 T
e Perodicticus_potto.k141_1092580                             3050 70 +     25941 T
e Perodicticus_ibeanus.k141_855320                            4682 70 +     13100 T
e Ziphius_cavirostris.ZipCav_flattened_line_71469            11395 83 +     12536 T
e Zapus_hudsonius.ZapHud_scaffold_11398                      10016 86 +     63895 T
e Zalophus_californianus.ZalCal_flattened_line_63728          1860 84 +      2932 T
e Xerus_inauris.XerIna_scaffold_48378                        19735 78 -     24430 T
e Vulpes_lagopus.VulLag_flattened_line_30954                  7412 84 -     43706 T
e Vicugna_pacos.KN270157.1                                 5368407 83 -   5488506 T
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Ursus_maritimus.KK499267.1                               4846935 84 -   5085361 T
e Uropsilus_gracilis.UroGra_scaffold_97021                    1934 83 -      4736 T
e Tursiops_truncatus.MRVK01000835.1                       15737703 83 +  33153633 T
e Tupaia_tana.TupTan_flattened_line_97126                     3223 81 -     10553 T
e Tupaia_chinensis.KB320699.1                              2149632 109 +   4065304 T
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                    686 71 -      1748 T
e Trachypithecus_pileatus.k141_2007326                        2953 77 +     20839 T
e Trachypithecus_phayrei.ctg124                            5933708 77 +   6242583 T
e Trachypithecus_obscurus.k141_190785                        19611 77 +     32220 T
e Trachypithecus_melamera.k141_434728                         1293 77 +      9834 T
e Trachypithecus_leucocephalus.k141_587342                    2140 77 -     10723 T
e Trachypithecus_laotum.k141_907409                           3438 77 -     21137 T
e Trachypithecus_hatinhensis.k141_143409                      9702 77 -     18194 T
e Trachypithecus_germaini.k141_912491                         9762 77 -     27529 T
e Trachypithecus_geei.k141_277701                            42290 77 -     60166 T
e Trachypithecus_francoisi.k141_1412647                       2171 77 -     19997 T
e Trachypithecus_cristatus.k141_580354                        5741 74 +     19930 T
e Trachypithecus_crepusculus.k141_1194022                     9836 77 +     15221 T
e Trachypithecus_auratus.k141_722599                          5641 74 -     20410 T
e Tonatia_saurophila.TonSau_scaffold_294                     78979 83 +    610378 T
e Tolypeutes_matacus.TolMat_scaffold_228639                   1874 68 +      8208 T
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103202 82 +    114563 T
e Theropithecus_gelada.CM009954.1                        186422913 77 + 186847797 T
e Tarsius_wallacei.k141_780063                               14975 83 +     25099 T
e Tarsius_lariang.k141_2201908                               10670 83 +     70052 T
e Tapirus_terrestris.TapTer_scaffold_755                    383676 83 +    539355 T
e Tapirus_indicus.TapInd_scaffold_9301                      115221 83 -    156842 T
e Tamandua_tetradactyla.TamTet_scaffold_1782                 69488 87 +    116680 T
e Tadarida_brasiliensis.TadBra_scaffold_25820                 6838 82 +     41958 T
e Sus_scrofa.CM000828.4                                   62882475 70 -  69701581 T
e Suricata_suricatta.SurSur_flattened_line_6629              14222 65 -    196729 T
e Spilogale_gracilis.SpiGra_flattened_line_13525             27234 83 +     97271 T
e Spermophilus_dauricus.KZ294078.1                         1948240 78 -   3870691 T
e Sorex_araneus.JH798187.1                                13647036 64 -  18376816 T
e Solenodon_paradoxus.SolPar_flattened_line_5840            187706 83 -    191337 T
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Semnopithecus_vetulus.k141_1200928                          9907 77 +     15514 T
e Semnopithecus_schistaceus.k141_1584426                      1647 77 +      7198 T
e Semnopithecus_priam.k141_638794                             1585 77 -     19483 T
e Semnopithecus_johnii.k141_670120                            2063 77 +     27826 T
e Semnopithecus_hypoleucos.k141_1615806                      21539 77 +     39453 T
e Semnopithecus_entellus.k141_11662                          14334 77 -     19888 T
e Scalopus_aquaticus.ScaAqu_scaffold_662                    151381 45 -    313613 T
e Saiga_tatarica.SaiTat_scaffold_373180                       3569 82 +      4321 T
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                84685 82 -     96226 T
e Rhinopithecus_strykeri.ctg102                            7666510 297 +   7961872 T
e Rhinopithecus_roxellana.NC_044550.1                     91230862 357 - 195417433 T
e Rhinopithecus_bieti.k119_217274                             1505 377 -     11128 T
e Rhinolophus_sinicus.LVEH01000134.1                        366934 83 -   3329780 T
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4916 82 +     55207 T
e Pygathrix_nigripes_a.k141_215492                              9792 77 -     72585 T
e Pygathrix_nigripes_b.ctg100                                 7603953 77 +   7812017 T
e Pygathrix_cinerea.k141_1153803                              9819 77 -     91421 T
e Puma_concolor.QAVW01001104.1                            20270304 65 -  38429054 T
e Pteropus_vampyrus.KN534172.1                                1636 81 -      8028 T
e Pteropus_alecto.KB030862.1                              22973699 81 +  28871421 T
e Pteronura_brasiliensis.PteBra_flattened_line_31117         36692 84 +     42204 T
e Pteronotus_parnellii.KE909381.1                            11228 88 -     21811 T
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Propithecus_verreauxi.k141_956661                            427 67 -      6182 T
e Propithecus_tattersalli.k141_790011                        24182 67 -     67325 T
e Propithecus_perrieri.k141_1200571                            370 67 -     24134 T
e Propithecus_edwardsi.k141_1176054                          22187 67 +     35766 T
e Propithecus_diadema.k141_357118                              829 67 +      4256 T
e Propithecus_coronatus.k141_347390                          24668 67 +     38485 T
e Propithecus_coquerelli.NW_012148875.1                     986379 67 +   2598838 T
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10016 82 -     22811 T
e Presbytis_mitrata.k141_2342859                              9817 77 +     10147 T
e Presbytis_comata.k141_677006                               67990 77 -     81375 T
e Platanista_gangetica.PlaMin_flattened_line_32310           34209 83 +     35617 T
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              455 83 +     22620 T
e Piliocolobus_tephrosceles.PDMG02000141.1                14290710 77 -  14605196 T
e Piliocolobus_kirkii.k141_448987                            34489 77 +     51399 T
e Piliocolobus_gordonorum.k141_381342                        33073 77 +     89929 T
e Piliocolobus_badius.k141_1234363                           38346 77 +     62158 T
e Phocoena_phocoena.PhoPho_flattened_line_24159               8503 83 +     63832 T
e Petromus_typicus.PetTyp_scaffold_42190                     25860 81 -     29689 T
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25316 22 +     32600 T
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8872 65 -     78924 T
e Papio_ursinus.k141_3428135                                  3490 77 +      9205 T
e Papio_papio.k141_802527                                     3591 59 +     27711 T
e Papio_kindae.k141_1936966                                    305 170 +     41871 T
e Papio_hamadryas.Contig39                                20558088 77 +  20919399 T
e Papio_cynocephalus.k141_4307930                             1562 170 +     20448 T
e Papio_anubis.CM001495.2                                183437404 77 + 183742232 T
e Pantholops_hodgsonii.KE114653.1                          1264381 83 -   2937107 T
e Panthera_tigris.KE722367.1                               4716993 65 -   8748460 T
e Panthera_pardus.KV860321.1                                259846 65 +  18783137 T
e Panthera_onca.PanOnc_flattened_line_3271                  147137 65 +    230217 T
e Ovis_canadensis.OviCan_scaffold_2572                      173448 83 -    191736 T
e Ovis_aries.CM001607.2                                   17585027 83 +  44047080 T
e Otocyon_megalotis.JAEUCK010005147.1                       458751 84 -    559221 T
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               6853 82 -     18566 T
e Orcinus_orca.KB316932.1                                  2781456 83 -  10937097 T
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144668 82 +    630418 T
e Odobenus_rosmarus.KB229312.1                              500738 84 -   2017862 T
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1355765 71 +   3988456 T
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744927 65 + 199412804 T
e Nycticebus_coucang.k141_5327727                             2186 65 +      8486 T
e Nycticebus_bengalensis.LG01                            102574500 65 - 196305487 T
e Nyctereutes_procyonoides.CAJHUB010000658.1               9145997 84 -   9404916 T
e Noctilio_leporinus.NocLep_scaffold_251                    756405 82 +    783361 T
e Neophocaena_asiaeorientalis.KZ687982.1                   5865541 83 +   7148211 T
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nasalis_larvatus.k141_413338                                9830 77 +     21681 T
e Nannospalax_galili.KL204047.1                            2025524 76 -   3037898 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186126 87 +    196477 T
e Myotis_myotis.MyoMyo_scaffold_28916                        32630 72 +     33610 T
e Myotis_lucifugus.GL429869.1                              3902071 72 -   4330536 T
e Myotis_davidii.KB100139.1                                1585862 72 -   6019432 T
e Myotis_brandtii.KE162005.1                                278305 72 -  10118263 T
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               297681 84 -  14710649 T
e Muscardinus_avellanarius.MusAve_scaffold_82313              2356 77 +     14296 T
e Murina_feae.MurFea_scaffold_85699                           5135 74 +     14753 T
e Mungos_mungo.MunMun_flattened_line_23663                   31353 65 +     37127 T
e Moschus_moschiferus.MosMos_scaffold_61429                  27434 81 -     27816 T
e Mormoops_blainvillei.MorMeg_scaffold_1417                 137841 83 -    366855 T
e Monodon_monoceros.MonMon_M_scaffold_103                    26585 83 -    437263 T
e Mirza_zaza.k141_952172                                      4682 69 -     37649 T
e Mirounga_angustirostris.MirAng_flattened_line_22144        62449 84 -     63350 T
e Miopithecus_ogouensis.k141_534055                           3817 77 -     28506 T
e Miniopterus_schreibersii.MinSch_scaffold_18080             32985 83 +     64694 T
e Miniopterus_natalensis.LDJU01000034.1                    1849109 83 +   8254450 T
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                13435 83 -     19307 T
e Microgale_talazaci.MicTal_scaffold_6613                    15418  9 -    145209 I
e Microcebus_murinus.CM007674.1                           18283328 70 -  93316391 T
e Mesoplodon_bidens.MesBid_scaffold_108144                    3080 83 +     10310 T
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365              6250 84 +     13704 T
e Megaderma_lyra.MegLyr_scaffold_4542                         6791 64 -    207569 T
e Marmota_marmota.CZRN01000018.1                          33097448 78 -  40650429 T
e Manis_pentadactyla.KN006162.1                              47010 81 -    317179 T
e Manis_javanica.JSZB01003497.1                              15621 81 +    737560 T
e Mandrillus_sphinx.Contig270                               346260 77 +    752769 T
e Mandrillus_leucophaeus.scaffold280                      23932082 77 -  24302211 T
e Macroglossus_sobrinus.MacSob_scaffold_8222                 87576 81 +     94391 T
e Macaca_tonkeana.k141_1498238                               20527 77 -     45290 T
e Macaca_thibetana.k99_7456                                  15730 77 -     15935 T
e Macaca_silenus.Contig273                                  324461 77 -    668171 T
e Macaca_siberu.k141_635500                                   1588 77 -     14993 T
e Macaca_radiata.k141_3680011                                 1787 77 +     20474 T
e Macaca_nigra.k141_1655396                                  74790 77 +     89720 T
e Macaca_nemestrina.KQ007038.1                            25452590 77 -  25927173 T
e Macaca_mulatta.NC_041758.1                             186834029 77 + 187317192 T
e Macaca_maura.k141_2733130                                  18941 77 +     37952 T
e Macaca_leonina.k141_3550399                                10374 77 -     29190 T
e Macaca_fuscata.k119_255327                                   921 77 -     23192 T
e Macaca_fascicularis.k141_814140                            75202 77 -    114318 T
e Macaca_cyclopis.k119_18836                                  7408 77 -     26193 T
e Macaca_assamensis.Contig5                               59670910 77 +  60120075 T
e Macaca_arctoides.k141_2326796                               1650 77 +     40492 T
e Lycaon_pictus.CM007581.1                                17951736 84 -  59628241 T
e Loxodonta_africana.GL010049.1                            4214528 82 -  43346337 T
e Lophocebus_aterrimus.ctg367                              1431466 78 +   1826925 T
e Lipotes_vexillifer.KE559953.1                             267490 80 -    662738 T
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3036119 84 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      22804 70 +     54090 T
e Lepilemur_ruficaudatus.k141_420445                         31660 70 -     32627 T
e Lepilemur_dorsalis.k141_577674                             24749 70 +     45836 T
e Lepilemur_ankaranensis.k141_596936                          6802 70 -     23766 T
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12260 85 -     42476 T
e Kogia_breviceps.KogBre_flattened_line_192630                1679 83 -      3359 T
e Jaculus_jaculus.JH725527.1                               8271383 87 -   9596543 T
e Inia_geoffrensis.IniGeo_flattened_line_48101               22412 83 +     23964 T
e Indri_indri.k141_3655594                                   18168 70 +     31101 T
e Ictidomys_tridecemlineatus.JH393364.1                    7514598 78 -   7955117 T
e Hystrix_cristata.HysCri_scaffold_5660                      80936 83 +    135385 T
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19862 83 -    143317 T
e Hyaena_hyaena.HyaHya_flattened_line_26932                  40617 65 +     55795 T
e Hipposideros_galeritus.HipGal_scaffold_29171               39830 82 +     43066 T
e Hipposideros_armiger.JXIK01000431.1                       108389 82 +   1711038 T
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112051 83 +    128679 T
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 255 82 +       961 T
e Heterocephalus_glaber.JH602082.1                        20659393 83 +  22651954 T
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17496 83 +     36099 T
e Helogale_parvula.HelPar_flattened_line_2585               238152 65 +    327341 T
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   30090 75 +     78134 T
e Glis_glis.GliGli_scaffold_19807                            30363 77 +     49224 T
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_56069               25478 83 +     26054 T
e Galagoides_demidoff.k141_31856                              3212 81 -      3432 T
e Fukomys_damarensis.KN121974.1                             848514 83 +   3816255 T
e Felis_nigripes.FelNig_flattened_line_20823                  5515 65 -     36744 T
e Felis_catus_fca126.CM031415.1                           20191990 65 + 205367284 T
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             24808 83 -     44125 T
e Eschrichtius_robustus.EscRob_flattened_line_8968           10871 83 +    133382 T
e Erythrocebus_patas.Contig38                             21199940 77 -  21539334 T
e Erinaceus_europaeus.JH835339.1                           3325355 79 -   7059049 T
e Equus_przewalskii.KK951119.1                               29602 83 +    498745 T
e Equus_caballus.CM000403.2                               18527587 83 -  39960074 T
e Equus_asinus.JREZ01000139.1                              1279766 83 +   4378816 T
e Eptesicus_fuscus.JH977646.1                              2144081 83 -  14770903 T
e Enhydra_lutris.KZ291758.1                               16325783 81 -  41312741 T
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089018 82 +  10337057 T
e Elaphurus_davidianus.JRFZ01104969.1                       310296 83 +    607251 T
e Eidolon_helvum.KE759718.1                                   7430 82 +     11740 T
e Dolichotis_patagonum.DolPat_scaffold_30833                 31504 83 -     42551 T
e Dipodomys_stephensi.DipSte_scaffold_75855                  12030 83 +     14536 T
e Dipodomys_ordii.KN672350.1                              18895820 83 +  37912305 T
e Dinomys_branickii.DinBra_scaffold_21862                    34287 77 +     67921 T
e Diceros_bicornis.DicBicMic_scaffold_5955                    2499 83 +    198055 T
e Dicerorhinus_sumatrensis.PEKH010002091.1                  669424 83 +   1390856 T
e Desmodus_rotundus.KZ672289.1                             8627924 83 +  20541912 T
e Delphinapterus_leucas.KZ290073.1                        16811195 83 +  35494412 T
e Daubentonia_madagascariensis.ctg71                      12532896 70 -  12879189 T
e Dasypus_novemcinctus.JH564415.1                            61086 85 +   2246927 T
e Dasyprocta_punctata.DasPun_flattened_line_206793            1247 83 +      3576 T
e Cuniculus_paca.CunPac_flattened_line_231100                 2864 83 +      5455 T
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             24235 65 -     87169 T
e Crocidura_indochinensis.CroInd_scaffold_287352               379 52 +      4208 T
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          10509 80 -     20389 T
e Condylura_cristata.JH655891.1                           17545999 82 -  53390261 T
e Colobus_polykomos.k141_906115                              31777 104 +     84244 T
e Colobus_guereza.LG01                                   199944908 129 + 200372422 T
e Colobus_angolensis.KN981557.1                            1905238 77 +   2368649 T
e Choloepus_hoffmanni.KN194906.1                            170274 87 +    839153 T
e Choloepus_didactylus.ChoDid_scaffold_45914                 15175 87 +     19366 T
e Chlorocebus_sabaeus.CM001947.1                         135416709 77 + 135778131 T
e Chlorocebus_pygerythrus.k141_1025673                        9704 77 -     50209 T
e Chlorocebus_aethiops.ctg25                              18423261 77 -  18827391 T
e Chinchilla_lanigera.JH722012.1                           1248509 80 +   2543920 T
e Cheirogaleus_medius.k141_1055463                           12075 66 +     57038 T
e Cheirogaleus_major.k141_333249                             16726 66 -     52598 T
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            4816 68 -      6351 T
e Cercopithecus_roloway.k141_3180641                         39792 77 -     41420 T
e Cercopithecus_pogonias.k141_822820                          9298 77 +     17596 T
e Cercopithecus_petaurista.k141_807961                        9322 77 -     27947 T
e Cercopithecus_nictitans.k141_3278028                        1809 77 +      7159 T
e Cercopithecus_neglectus.k141_2526306                       34517 77 -     53127 T
e Cercopithecus_mona.ctg39                                21217397 77 -  21565898 T
e Cercopithecus_albogularis.ctg5                                38811706 77 +  39242232 T
e Cercopithecus_lowei.k141_457449                             9330 77 -     11289 T
e Cercopithecus_hamlyni.k141_187466                           9311 77 -     27936 T
e Cercopithecus_diana.k141_2427854                             976 77 +      9989 T
e Cercopithecus_cephus.k141_1078548                           6623 77 +     29689 T
e Cercopithecus_ascanius.k141_1024104                         3639 77 -     20310 T
e Cercocebus_torquatus.k141_3057011                           3493 77 +     27781 T
e Cercocebus_lunulatus.k141_3846941                           3263 77 +      8260 T
e Cercocebus_chrysogaster.k141_393940                         8844 77 -     19203 T
e Cercocebus_atys.KQ010504.1                               4470295 77 +   4669795 T
e Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2609 83 -      3715 T
e Cephalopachus_bancanus.k141_2037105                         4971 83 -      8605 T
e Cavia_tschudii.CavTsc_scaffold_8919                        98614 82 +    143979 T
e Cavia_porcellus.DS562891.1                              18359739 82 -  23407841 T
e Cavia_aperea.AVPZ01000300.1                             18347479 82 -  23392119 T
e Catagonus_wagneri.CatWag_scaffold_2839                     89266 124 +    217609 T
e Castor_canadensis.CasCan_scaffold_2074                    133658 80 +    179628 T
e Carollia_perspicillata.CarPer_scaffold_92756                2893 83 -     11696 T
e Carlito_syrichta.NW_007259797.1                           141055 83 -    496798 T
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18060012 83 -  44709034 T
e Capra_aegagrus.CM003241.1                               18829292 83 +  46296322 T
e Canis_lupus_orion.HG994398.1                            18496797 84 +  63665305 T
e Canis_lupus_familiaris.chr16                            17955496 84 -  59632846 T
e Canis_lupus_dingo.QKWQ01000480.1                         9031232 84 -   9314153 T
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    181845 84 -    185531 T
e CanFam4.chr16                                           17795788 84 -  60362399 T
e Camelus_ferus.KB017975.1                                  399658 83 -   1652518 T
e Camelus_dromedarius.KN272107.1                           2331382 83 -   7040546 T
e Camelus_bactrianus.KN276810.1                            9998918 83 -  17673402 T
e Bubalus_bubalis.KI419123.1                               2818467 83 +   4408762 T
e Bos_taurus.CM000203.6                                   18082978 83 +  45695690 T
e Bos_mutus.JH880303.1                                     1124900 83 -   1948126 T
e Bos_indicus.CM003047.1                                  20272340 83 +  48749331 T
e Bison_bison.KN261452.1                                    199135 83 -    288883 T
e Beatragus_hunteri.BeaHun_scaffold_50177                    26096 83 +     34529 T
e Balaenoptera_bonaerensis.DF707048.1                         2025 83 -     18090 T
e Balaenoptera_acutorostrata.KI537508.1                   15191559 83 +  23207421 T
e Avahi_peyrierasi.k141_1424874                              49933 67 +     85213 T
e Avahi_laniger.k141_765380                                  49308 67 -     92717 T
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  2475 83 +     43469 T
e Arctocebus_calabarensis.k141_288239                        14449 70 +     17124 T
e Aplodontia_rufa.AprRuf_scaffold_68852                       7278 78 +     20879 T
e Antilocapra_americana.AntAmePen_scaffold_12469             97626 83 -    100397 T
e Anoura_caudifer.AnoCau_scaffold_1412                      183123 83 +    412891 T
e Ammotragus_lervia.NIVO01071767.1                          675174 83 -   2318259 T
e Allochrocebus_solatus.k141_166128                            534 77 -     12518 T
e Allochrocebus_preussi.k141_310680                           9377 77 -      9772 T
e Allochrocebus_lhoesti.k141_4309873                          9251 77 -     28001 T
e Allenopithecus_nigroviridis.k141_3361533                    9324 77 -     52922 T
e Allactaga_bullata.AllBul_scaffold_9566                     65003 87 -     89534 T
e Ailurus_fulgens.LNAC01001112.1                             75224 84 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9507000 83 -  29979442 T
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           823290 65 -   1699592 T

a score=0.000000
s hg38.chrUn_KI270753v1                                        905 14 +     62944 GAGTAGAACCTGCT
s Gorilla_beringei.k141_3596273                              10275 14 -     32273 GAGTAGAAGCTGCT
i Gorilla_beringei.k141_3596273                          T 156 C 0
s Gorilla_gorilla.CYUI03002401.1                              6057 14 +      7071 aagtagaacctgct
i Gorilla_gorilla.CYUI03002401.1                         C 0 I 167
s Hoolock_leuconedys.ctg274                                    429320 14 +    630532 GAGTAGAACCTGCT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_307679                               12238 14 -     15490 GAGTAGAACCTGCT
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              54243 14 +     67168 GAGTAGAACCTGCT
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189537895 14 - 191637585 GAGTAGAACCTGCT
i Hylobates_pileatus_b.LG02                                     I 205 T 205
s Hylobates_pileatus_a.tarseq_633                            3330788 14 -  11177569 GAGTAGAACCTGCT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    38672 10 +     80009 gagtagaacc----
i Pan_paniscus.KQ411613.1                                C 0 T 267
s Pan_troglodytes.CM009242.2                             189137428 14 + 189151597 gagtagaacctgct
i Pan_troglodytes.CM009242.2                             C 0 I 2
s Pongo_abelii.CM009266.2                                189125612 14 + 189387572 GAGTAGAACCTGCT
i Pongo_abelii.CM009266.2                                I 309 T 307
s Pongo_pygmaeus.ctg66                                     9565216 14 +   9816681 GAGTAGAACCTGCT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1087935 14 -   1523678 GAGTAGAACCTGCT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Loris_tardigradus.ctg83                                   999532 66 +   6120653 T
e Loris_lydekkerianus.k141_2539221                             696 65 +     11245 T
e Perodicticus_potto.k141_1092580                             3050 70 +     25941 T
e Perodicticus_ibeanus.k141_855320                            4682 70 +     13100 T
e Ziphius_cavirostris.ZipCav_flattened_line_71469            11395 83 +     12536 T
e Zapus_hudsonius.ZapHud_scaffold_11398                      10016 86 +     63895 T
e Zalophus_californianus.ZalCal_flattened_line_63728          1860 84 +      2932 T
e Xerus_inauris.XerIna_scaffold_48378                        19735 78 -     24430 T
e Vulpes_lagopus.VulLag_flattened_line_30954                  7412 84 -     43706 T
e Vicugna_pacos.KN270157.1                                 5368407 83 -   5488506 T
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Ursus_maritimus.KK499267.1                               4846935 84 -   5085361 T
e Uropsilus_gracilis.UroGra_scaffold_97021                    1934 83 -      4736 T
e Tursiops_truncatus.MRVK01000835.1                       15737703 83 +  33153633 T
e Tupaia_tana.TupTan_flattened_line_97126                     3223 81 -     10553 T
e Tupaia_chinensis.KB320699.1                              2149632 109 +   4065304 T
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                    686 71 -      1748 T
e Trachypithecus_pileatus.k141_2007326                        2953 77 +     20839 T
e Trachypithecus_phayrei.ctg124                            5933708 77 +   6242583 T
e Trachypithecus_obscurus.k141_190785                        19611 77 +     32220 T
e Trachypithecus_melamera.k141_434728                         1293 77 +      9834 T
e Trachypithecus_leucocephalus.k141_587342                    2140 77 -     10723 T
e Trachypithecus_laotum.k141_907409                           3438 77 -     21137 T
e Trachypithecus_hatinhensis.k141_143409                      9702 77 -     18194 T
e Trachypithecus_germaini.k141_912491                         9762 77 -     27529 T
e Trachypithecus_geei.k141_277701                            42290 77 -     60166 T
e Trachypithecus_francoisi.k141_1412647                       2171 77 -     19997 T
e Trachypithecus_cristatus.k141_580354                        5741 74 +     19930 T
e Trachypithecus_crepusculus.k141_1194022                     9836 77 +     15221 T
e Trachypithecus_auratus.k141_722599                          5641 74 -     20410 T
e Tonatia_saurophila.TonSau_scaffold_294                     78979 83 +    610378 T
e Tolypeutes_matacus.TolMat_scaffold_228639                   1874 68 +      8208 T
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103202 82 +    114563 T
e Theropithecus_gelada.CM009954.1                        186422913 77 + 186847797 T
e Tarsius_wallacei.k141_780063                               14975 83 +     25099 T
e Tarsius_lariang.k141_2201908                               10670 83 +     70052 T
e Tapirus_terrestris.TapTer_scaffold_755                    383676 83 +    539355 T
e Tapirus_indicus.TapInd_scaffold_9301                      115221 83 -    156842 T
e Tamandua_tetradactyla.TamTet_scaffold_1782                 69488 87 +    116680 T
e Tadarida_brasiliensis.TadBra_scaffold_25820                 6838 82 +     41958 T
e Sus_scrofa.CM000828.4                                   62882475 70 -  69701581 T
e Suricata_suricatta.SurSur_flattened_line_6629              14222 65 -    196729 T
e Spilogale_gracilis.SpiGra_flattened_line_13525             27234 83 +     97271 T
e Spermophilus_dauricus.KZ294078.1                         1948240 78 -   3870691 T
e Sorex_araneus.JH798187.1                                13647036 64 -  18376816 T
e Solenodon_paradoxus.SolPar_flattened_line_5840            187706 83 -    191337 T
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Semnopithecus_vetulus.k141_1200928                          9907 77 +     15514 T
e Semnopithecus_schistaceus.k141_1584426                      1647 77 +      7198 T
e Semnopithecus_priam.k141_638794                             1585 77 -     19483 T
e Semnopithecus_johnii.k141_670120                            2063 77 +     27826 T
e Semnopithecus_hypoleucos.k141_1615806                      21539 77 +     39453 T
e Semnopithecus_entellus.k141_11662                          14334 77 -     19888 T
e Scalopus_aquaticus.ScaAqu_scaffold_662                    151381 45 -    313613 T
e Saiga_tatarica.SaiTat_scaffold_373180                       3569 82 +      4321 T
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                84685 82 -     96226 T
e Rhinopithecus_strykeri.ctg102                            7666510 297 +   7961872 T
e Rhinopithecus_roxellana.NC_044550.1                     91230862 357 - 195417433 T
e Rhinopithecus_bieti.k119_217274                             1505 377 -     11128 T
e Rhinolophus_sinicus.LVEH01000134.1                        366934 83 -   3329780 T
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4916 82 +     55207 T
e Pygathrix_nigripes_a.k141_215492                              9792 77 -     72585 T
e Pygathrix_nigripes_b.ctg100                                 7603953 77 +   7812017 T
e Pygathrix_cinerea.k141_1153803                              9819 77 -     91421 T
e Puma_concolor.QAVW01001104.1                            20270304 65 -  38429054 T
e Pteropus_vampyrus.KN534172.1                                1636 81 -      8028 T
e Pteropus_alecto.KB030862.1                              22973699 81 +  28871421 T
e Pteronura_brasiliensis.PteBra_flattened_line_31117         36692 84 +     42204 T
e Pteronotus_parnellii.KE909381.1                            11228 88 -     21811 T
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Propithecus_verreauxi.k141_956661                            427 67 -      6182 T
e Propithecus_tattersalli.k141_790011                        24182 67 -     67325 T
e Propithecus_perrieri.k141_1200571                            370 67 -     24134 T
e Propithecus_edwardsi.k141_1176054                          22187 67 +     35766 T
e Propithecus_diadema.k141_357118                              829 67 +      4256 T
e Propithecus_coronatus.k141_347390                          24668 67 +     38485 T
e Propithecus_coquerelli.NW_012148875.1                     986379 67 +   2598838 T
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10016 82 -     22811 T
e Presbytis_mitrata.k141_2342859                              9817 77 +     10147 T
e Presbytis_comata.k141_677006                               67990 77 -     81375 T
e Platanista_gangetica.PlaMin_flattened_line_32310           34209 83 +     35617 T
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              455 83 +     22620 T
e Piliocolobus_tephrosceles.PDMG02000141.1                14290710 77 -  14605196 T
e Piliocolobus_kirkii.k141_448987                            34489 77 +     51399 T
e Piliocolobus_gordonorum.k141_381342                        33073 77 +     89929 T
e Piliocolobus_badius.k141_1234363                           38346 77 +     62158 T
e Phocoena_phocoena.PhoPho_flattened_line_24159               8503 83 +     63832 T
e Petromus_typicus.PetTyp_scaffold_42190                     25860 81 -     29689 T
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25316 22 +     32600 T
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8872 65 -     78924 T
e Papio_ursinus.k141_3428135                                  3490 77 +      9205 T
e Papio_papio.k141_802527                                     3591 59 +     27711 T
e Papio_kindae.k141_1936966                                    305 170 +     41871 T
e Papio_hamadryas.Contig39                                20558088 77 +  20919399 T
e Papio_cynocephalus.k141_4307930                             1562 170 +     20448 T
e Papio_anubis.CM001495.2                                183437404 77 + 183742232 T
e Pantholops_hodgsonii.KE114653.1                          1264381 83 -   2937107 T
e Panthera_tigris.KE722367.1                               4716993 65 -   8748460 T
e Panthera_pardus.KV860321.1                                259846 65 +  18783137 T
e Panthera_onca.PanOnc_flattened_line_3271                  147137 65 +    230217 T
e Ovis_canadensis.OviCan_scaffold_2572                      173448 83 -    191736 T
e Ovis_aries.CM001607.2                                   17585027 83 +  44047080 T
e Otocyon_megalotis.JAEUCK010005147.1                       458751 84 -    559221 T
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               6853 82 -     18566 T
e Orcinus_orca.KB316932.1                                  2781456 83 -  10937097 T
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144668 82 +    630418 T
e Odobenus_rosmarus.KB229312.1                              500738 84 -   2017862 T
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1355765 71 +   3988456 T
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744927 65 + 199412804 T
e Nycticebus_coucang.k141_5327727                             2186 65 +      8486 T
e Nycticebus_bengalensis.LG01                            102574500 65 - 196305487 T
e Nyctereutes_procyonoides.CAJHUB010000658.1               9145997 84 -   9404916 T
e Noctilio_leporinus.NocLep_scaffold_251                    756405 82 +    783361 T
e Neophocaena_asiaeorientalis.KZ687982.1                   5865541 83 +   7148211 T
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nasalis_larvatus.k141_413338                                9830 77 +     21681 T
e Nannospalax_galili.KL204047.1                            2025524 76 -   3037898 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186126 87 +    196477 T
e Myotis_myotis.MyoMyo_scaffold_28916                        32630 72 +     33610 T
e Myotis_lucifugus.GL429869.1                              3902071 72 -   4330536 T
e Myotis_davidii.KB100139.1                                1585862 72 -   6019432 T
e Myotis_brandtii.KE162005.1                                278305 72 -  10118263 T
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               297681 84 -  14710649 T
e Muscardinus_avellanarius.MusAve_scaffold_82313              2356 77 +     14296 T
e Murina_feae.MurFea_scaffold_85699                           5135 74 +     14753 T
e Mungos_mungo.MunMun_flattened_line_23663                   31353 65 +     37127 T
e Moschus_moschiferus.MosMos_scaffold_61429                  27434 81 -     27816 T
e Mormoops_blainvillei.MorMeg_scaffold_1417                 137841 83 -    366855 T
e Monodon_monoceros.MonMon_M_scaffold_103                    26585 83 -    437263 T
e Mirza_zaza.k141_952172                                      4682 69 -     37649 T
e Mirounga_angustirostris.MirAng_flattened_line_22144        62449 84 -     63350 T
e Miopithecus_ogouensis.k141_534055                           3817 77 -     28506 T
e Miniopterus_schreibersii.MinSch_scaffold_18080             32985 83 +     64694 T
e Miniopterus_natalensis.LDJU01000034.1                    1849109 83 +   8254450 T
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                13435 83 -     19307 T
e Microgale_talazaci.MicTal_scaffold_6613                    15418  9 -    145209 I
e Microcebus_murinus.CM007674.1                           18283328 70 -  93316391 T
e Mesoplodon_bidens.MesBid_scaffold_108144                    3080 83 +     10310 T
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365              6250 84 +     13704 T
e Megaderma_lyra.MegLyr_scaffold_4542                         6791 64 -    207569 T
e Marmota_marmota.CZRN01000018.1                          33097448 78 -  40650429 T
e Manis_pentadactyla.KN006162.1                              47010 81 -    317179 T
e Manis_javanica.JSZB01003497.1                              15621 81 +    737560 T
e Mandrillus_sphinx.Contig270                               346260 77 +    752769 T
e Mandrillus_leucophaeus.scaffold280                      23932082 77 -  24302211 T
e Macroglossus_sobrinus.MacSob_scaffold_8222                 87576 81 +     94391 T
e Macaca_tonkeana.k141_1498238                               20527 77 -     45290 T
e Macaca_thibetana.k99_7456                                  15730 77 -     15935 T
e Macaca_silenus.Contig273                                  324461 77 -    668171 T
e Macaca_siberu.k141_635500                                   1588 77 -     14993 T
e Macaca_radiata.k141_3680011                                 1787 77 +     20474 T
e Macaca_nigra.k141_1655396                                  74790 77 +     89720 T
e Macaca_nemestrina.KQ007038.1                            25452590 77 -  25927173 T
e Macaca_mulatta.NC_041758.1                             186834029 77 + 187317192 T
e Macaca_maura.k141_2733130                                  18941 77 +     37952 T
e Macaca_leonina.k141_3550399                                10374 77 -     29190 T
e Macaca_fuscata.k119_255327                                   921 77 -     23192 T
e Macaca_fascicularis.k141_814140                            75202 77 -    114318 T
e Macaca_cyclopis.k119_18836                                  7408 77 -     26193 T
e Macaca_assamensis.Contig5                               59670910 77 +  60120075 T
e Macaca_arctoides.k141_2326796                               1650 77 +     40492 T
e Lycaon_pictus.CM007581.1                                17951736 84 -  59628241 T
e Loxodonta_africana.GL010049.1                            4214528 82 -  43346337 T
e Lophocebus_aterrimus.ctg367                              1431466 78 +   1826925 T
e Lipotes_vexillifer.KE559953.1                             267490 80 -    662738 T
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3036119 84 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      22804 70 +     54090 T
e Lepilemur_ruficaudatus.k141_420445                         31660 70 -     32627 T
e Lepilemur_dorsalis.k141_577674                             24749 70 +     45836 T
e Lepilemur_ankaranensis.k141_596936                          6802 70 -     23766 T
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12260 85 -     42476 T
e Kogia_breviceps.KogBre_flattened_line_192630                1679 83 -      3359 T
e Jaculus_jaculus.JH725527.1                               8271383 87 -   9596543 T
e Inia_geoffrensis.IniGeo_flattened_line_48101               22412 83 +     23964 T
e Indri_indri.k141_3655594                                   18168 70 +     31101 T
e Ictidomys_tridecemlineatus.JH393364.1                    7514598 78 -   7955117 T
e Hystrix_cristata.HysCri_scaffold_5660                      80936 83 +    135385 T
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19862 83 -    143317 T
e Hyaena_hyaena.HyaHya_flattened_line_26932                  40617 65 +     55795 T
e Hipposideros_galeritus.HipGal_scaffold_29171               39830 82 +     43066 T
e Hipposideros_armiger.JXIK01000431.1                       108389 82 +   1711038 T
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112051 83 +    128679 T
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 255 82 +       961 T
e Heterocephalus_glaber.JH602082.1                        20659393 83 +  22651954 T
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17496 83 +     36099 T
e Helogale_parvula.HelPar_flattened_line_2585               238152 65 +    327341 T
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   30090 75 +     78134 T
e Glis_glis.GliGli_scaffold_19807                            30363 77 +     49224 T
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_56069               25478 83 +     26054 T
e Galagoides_demidoff.k141_31856                              3212 81 -      3432 T
e Fukomys_damarensis.KN121974.1                             848514 83 +   3816255 T
e Felis_nigripes.FelNig_flattened_line_20823                  5515 65 -     36744 T
e Felis_catus_fca126.CM031415.1                           20191990 65 + 205367284 T
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             24808 83 -     44125 T
e Eschrichtius_robustus.EscRob_flattened_line_8968           10871 83 +    133382 T
e Erythrocebus_patas.Contig38                             21199940 77 -  21539334 T
e Erinaceus_europaeus.JH835339.1                           3325355 79 -   7059049 T
e Equus_przewalskii.KK951119.1                               29602 83 +    498745 T
e Equus_caballus.CM000403.2                               18527587 83 -  39960074 T
e Equus_asinus.JREZ01000139.1                              1279766 83 +   4378816 T
e Eptesicus_fuscus.JH977646.1                              2144081 83 -  14770903 T
e Enhydra_lutris.KZ291758.1                               16325783 81 -  41312741 T
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089018 82 +  10337057 T
e Elaphurus_davidianus.JRFZ01104969.1                       310296 83 +    607251 T
e Eidolon_helvum.KE759718.1                                   7430 82 +     11740 T
e Dolichotis_patagonum.DolPat_scaffold_30833                 31504 83 -     42551 T
e Dipodomys_stephensi.DipSte_scaffold_75855                  12030 83 +     14536 T
e Dipodomys_ordii.KN672350.1                              18895820 83 +  37912305 T
e Dinomys_branickii.DinBra_scaffold_21862                    34287 77 +     67921 T
e Diceros_bicornis.DicBicMic_scaffold_5955                    2499 83 +    198055 T
e Dicerorhinus_sumatrensis.PEKH010002091.1                  669424 83 +   1390856 T
e Desmodus_rotundus.KZ672289.1                             8627924 83 +  20541912 T
e Delphinapterus_leucas.KZ290073.1                        16811195 83 +  35494412 T
e Daubentonia_madagascariensis.ctg71                      12532896 70 -  12879189 T
e Dasypus_novemcinctus.JH564415.1                            61086 85 +   2246927 T
e Dasyprocta_punctata.DasPun_flattened_line_206793            1247 83 +      3576 T
e Cuniculus_paca.CunPac_flattened_line_231100                 2864 83 +      5455 T
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             24235 65 -     87169 T
e Crocidura_indochinensis.CroInd_scaffold_287352               379 52 +      4208 T
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          10509 80 -     20389 T
e Condylura_cristata.JH655891.1                           17545999 82 -  53390261 T
e Colobus_polykomos.k141_906115                              31777 104 +     84244 T
e Colobus_guereza.LG01                                   199944908 129 + 200372422 T
e Colobus_angolensis.KN981557.1                            1905238 77 +   2368649 T
e Choloepus_hoffmanni.KN194906.1                            170274 87 +    839153 T
e Choloepus_didactylus.ChoDid_scaffold_45914                 15175 87 +     19366 T
e Chlorocebus_sabaeus.CM001947.1                         135416709 77 + 135778131 T
e Chlorocebus_pygerythrus.k141_1025673                        9704 77 -     50209 T
e Chlorocebus_aethiops.ctg25                              18423261 77 -  18827391 T
e Chinchilla_lanigera.JH722012.1                           1248509 80 +   2543920 T
e Cheirogaleus_medius.k141_1055463                           12075 66 +     57038 T
e Cheirogaleus_major.k141_333249                             16726 66 -     52598 T
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            4816 68 -      6351 T
e Cercopithecus_roloway.k141_3180641                         39792 77 -     41420 T
e Cercopithecus_pogonias.k141_822820                          9298 77 +     17596 T
e Cercopithecus_petaurista.k141_807961                        9322 77 -     27947 T
e Cercopithecus_nictitans.k141_3278028                        1809 77 +      7159 T
e Cercopithecus_neglectus.k141_2526306                       34517 77 -     53127 T
e Cercopithecus_mona.ctg39                                21217397 77 -  21565898 T
e Cercopithecus_albogularis.ctg5                                38811706 77 +  39242232 T
e Cercopithecus_lowei.k141_457449                             9330 77 -     11289 T
e Cercopithecus_hamlyni.k141_187466                           9311 77 -     27936 T
e Cercopithecus_diana.k141_2427854                             976 77 +      9989 T
e Cercopithecus_cephus.k141_1078548                           6623 77 +     29689 T
e Cercopithecus_ascanius.k141_1024104                         3639 77 -     20310 T
e Cercocebus_torquatus.k141_3057011                           3493 77 +     27781 T
e Cercocebus_lunulatus.k141_3846941                           3263 77 +      8260 T
e Cercocebus_chrysogaster.k141_393940                         8844 77 -     19203 T
e Cercocebus_atys.KQ010504.1                               4470295 77 +   4669795 T
e Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2609 83 -      3715 T
e Cephalopachus_bancanus.k141_2037105                         4971 83 -      8605 T
e Cavia_tschudii.CavTsc_scaffold_8919                        98614 82 +    143979 T
e Cavia_porcellus.DS562891.1                              18359739 82 -  23407841 T
e Cavia_aperea.AVPZ01000300.1                             18347479 82 -  23392119 T
e Catagonus_wagneri.CatWag_scaffold_2839                     89266 124 +    217609 T
e Castor_canadensis.CasCan_scaffold_2074                    133658 80 +    179628 T
e Carollia_perspicillata.CarPer_scaffold_92756                2893 83 -     11696 T
e Carlito_syrichta.NW_007259797.1                           141055 83 -    496798 T
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18060012 83 -  44709034 T
e Capra_aegagrus.CM003241.1                               18829292 83 +  46296322 T
e Canis_lupus_orion.HG994398.1                            18496797 84 +  63665305 T
e Canis_lupus_familiaris.chr16                            17955496 84 -  59632846 T
e Canis_lupus_dingo.QKWQ01000480.1                         9031232 84 -   9314153 T
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    181845 84 -    185531 T
e CanFam4.chr16                                           17795788 84 -  60362399 T
e Camelus_ferus.KB017975.1                                  399658 83 -   1652518 T
e Camelus_dromedarius.KN272107.1                           2331382 83 -   7040546 T
e Camelus_bactrianus.KN276810.1                            9998918 83 -  17673402 T
e Bubalus_bubalis.KI419123.1                               2818467 83 +   4408762 T
e Bos_taurus.CM000203.6                                   18082978 83 +  45695690 T
e Bos_mutus.JH880303.1                                     1124900 83 -   1948126 T
e Bos_indicus.CM003047.1                                  20272340 83 +  48749331 T
e Bison_bison.KN261452.1                                    199135 83 -    288883 T
e Beatragus_hunteri.BeaHun_scaffold_50177                    26096 83 +     34529 T
e Balaenoptera_bonaerensis.DF707048.1                         2025 83 -     18090 T
e Balaenoptera_acutorostrata.KI537508.1                   15191559 83 +  23207421 T
e Avahi_peyrierasi.k141_1424874                              49933 67 +     85213 T
e Avahi_laniger.k141_765380                                  49308 67 -     92717 T
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  2475 83 +     43469 T
e Arctocebus_calabarensis.k141_288239                        14449 70 +     17124 T
e Aplodontia_rufa.AprRuf_scaffold_68852                       7278 78 +     20879 T
e Antilocapra_americana.AntAmePen_scaffold_12469             97626 83 -    100397 T
e Anoura_caudifer.AnoCau_scaffold_1412                      183123 83 +    412891 T
e Ammotragus_lervia.NIVO01071767.1                          675174 83 -   2318259 T
e Allochrocebus_solatus.k141_166128                            534 77 -     12518 T
e Allochrocebus_preussi.k141_310680                           9377 77 -      9772 T
e Allochrocebus_lhoesti.k141_4309873                          9251 77 -     28001 T
e Allenopithecus_nigroviridis.k141_3361533                    9324 77 -     52922 T
e Allactaga_bullata.AllBul_scaffold_9566                     65003 87 -     89534 T
e Ailurus_fulgens.LNAC01001112.1                             75224 84 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9507000 83 -  29979442 T
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           823290 65 -   1699592 T

a score=0.000000
s hg38.chrUn_KI270753v1                                        919 18 +     62944 ATGTTGGAGGAACTCTAT
s Gorilla_beringei.k141_3596273                              10289 18 -     32273 ATGTTGGAGGAACTCTAT
i Gorilla_beringei.k141_3596273                          C 0 I 185
s Gorilla_gorilla.LT578341.1                             186332441 18 + 186649187 ATGTTGGAGGAACTCTAT
i Gorilla_gorilla.LT578341.1                             T 140 I 183
s Hoolock_leuconedys.ctg274                                    429334 18 +    630532 ATGTTAGAGGAAGTCTAT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_307679                               12252 18 -     15490 ATGTTAGAGGAACTCTAT
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              54257 18 +     67168 ATGTTAAAGAAACTCTAT
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189537704 18 - 191637585 ATGTTAGAGAAACTCTAT
i Hylobates_pileatus_b.LG02                                     T 205 I 205
s Hylobates_pileatus_a.tarseq_633                            3330802 18 -  11177569 ATGTTAGGGGAACTCTAT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    38415 13 +     80009 -----AGAGGAACTCTAC
i Pan_paniscus.KQ411613.1                                T 267 C 0
s Pan_troglodytes.CM009242.2                             189137444 16 + 189151597 --gttggaggaactctat
i Pan_troglodytes.CM009242.2                             I 2 I 1
s Pongo_abelii.CM009266.2                                189125319 16 + 189387572 --GTTAGAGGATCTCTAT
i Pongo_abelii.CM009266.2                                T 307 I 307
s Pongo_pygmaeus.ctg66                                     9565230 16 +   9816681 --GTTAGAGGAACTCTAT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1087949 18 -   1523678 ATGTTAGAGCAACTCTAC
i Symphalangus_syndactylus.tarseq_199                    C 0 I 1
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Loris_tardigradus.ctg83                                   999532 66 +   6120653 T
e Loris_lydekkerianus.k141_2539221                             696 65 +     11245 T
e Perodicticus_potto.k141_1092580                             3050 70 +     25941 T
e Perodicticus_ibeanus.k141_855320                            4682 70 +     13100 T
e Ziphius_cavirostris.ZipCav_flattened_line_71469            11395 83 +     12536 T
e Zapus_hudsonius.ZapHud_scaffold_11398                      10016 86 +     63895 T
e Zalophus_californianus.ZalCal_flattened_line_63728          1860 84 +      2932 T
e Xerus_inauris.XerIna_scaffold_48378                        19735 78 -     24430 T
e Vulpes_lagopus.VulLag_flattened_line_30954                  7412 84 -     43706 T
e Vicugna_pacos.KN270157.1                                 5368407 83 -   5488506 T
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Ursus_maritimus.KK499267.1                               4846935 84 -   5085361 T
e Uropsilus_gracilis.UroGra_scaffold_97021                    1934 83 -      4736 T
e Tursiops_truncatus.MRVK01000835.1                       15737703 83 +  33153633 T
e Tupaia_tana.TupTan_flattened_line_97126                     3223 81 -     10553 T
e Tupaia_chinensis.KB320699.1                              2149632 109 +   4065304 T
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                    686 71 -      1748 T
e Trachypithecus_pileatus.k141_2007326                        2953 77 +     20839 T
e Trachypithecus_phayrei.ctg124                            5933708 77 +   6242583 T
e Trachypithecus_obscurus.k141_190785                        19611 77 +     32220 T
e Trachypithecus_melamera.k141_434728                         1293 77 +      9834 T
e Trachypithecus_leucocephalus.k141_587342                    2140 77 -     10723 T
e Trachypithecus_laotum.k141_907409                           3438 77 -     21137 T
e Trachypithecus_hatinhensis.k141_143409                      9702 77 -     18194 T
e Trachypithecus_germaini.k141_912491                         9762 77 -     27529 T
e Trachypithecus_geei.k141_277701                            42290 77 -     60166 T
e Trachypithecus_francoisi.k141_1412647                       2171 77 -     19997 T
e Trachypithecus_cristatus.k141_580354                        5741 74 +     19930 T
e Trachypithecus_crepusculus.k141_1194022                     9836 77 +     15221 T
e Trachypithecus_auratus.k141_722599                          5641 74 -     20410 T
e Tonatia_saurophila.TonSau_scaffold_294                     78979 83 +    610378 T
e Tolypeutes_matacus.TolMat_scaffold_228639                   1874 68 +      8208 T
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103202 82 +    114563 T
e Theropithecus_gelada.CM009954.1                        186422913 77 + 186847797 T
e Tarsius_wallacei.k141_780063                               14975 83 +     25099 T
e Tarsius_lariang.k141_2201908                               10670 83 +     70052 T
e Tapirus_terrestris.TapTer_scaffold_755                    383676 83 +    539355 T
e Tapirus_indicus.TapInd_scaffold_9301                      115221 83 -    156842 T
e Tamandua_tetradactyla.TamTet_scaffold_1782                 69488 87 +    116680 T
e Tadarida_brasiliensis.TadBra_scaffold_25820                 6838 82 +     41958 T
e Sus_scrofa.CM000828.4                                   62882475 70 -  69701581 T
e Suricata_suricatta.SurSur_flattened_line_6629              14222 65 -    196729 T
e Spilogale_gracilis.SpiGra_flattened_line_13525             27234 83 +     97271 T
e Spermophilus_dauricus.KZ294078.1                         1948240 78 -   3870691 T
e Sorex_araneus.JH798187.1                                13647036 64 -  18376816 T
e Solenodon_paradoxus.SolPar_flattened_line_5840            187706 83 -    191337 T
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Semnopithecus_vetulus.k141_1200928                          9907 77 +     15514 T
e Semnopithecus_schistaceus.k141_1584426                      1647 77 +      7198 T
e Semnopithecus_priam.k141_638794                             1585 77 -     19483 T
e Semnopithecus_johnii.k141_670120                            2063 77 +     27826 T
e Semnopithecus_hypoleucos.k141_1615806                      21539 77 +     39453 T
e Semnopithecus_entellus.k141_11662                          14334 77 -     19888 T
e Scalopus_aquaticus.ScaAqu_scaffold_662                    151381 45 -    313613 T
e Saiga_tatarica.SaiTat_scaffold_373180                       3569 82 +      4321 T
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                84685 82 -     96226 T
e Rhinopithecus_strykeri.ctg102                            7666510 297 +   7961872 T
e Rhinopithecus_roxellana.NC_044550.1                     91230862 357 - 195417433 T
e Rhinopithecus_bieti.k119_217274                             1505 377 -     11128 T
e Rhinolophus_sinicus.LVEH01000134.1                        366934 83 -   3329780 T
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4916 82 +     55207 T
e Pygathrix_nigripes_a.k141_215492                              9792 77 -     72585 T
e Pygathrix_nigripes_b.ctg100                                 7603953 77 +   7812017 T
e Pygathrix_cinerea.k141_1153803                              9819 77 -     91421 T
e Puma_concolor.QAVW01001104.1                            20270304 65 -  38429054 T
e Pteropus_vampyrus.KN534172.1                                1636 81 -      8028 T
e Pteropus_alecto.KB030862.1                              22973699 81 +  28871421 T
e Pteronura_brasiliensis.PteBra_flattened_line_31117         36692 84 +     42204 T
e Pteronotus_parnellii.KE909381.1                            11228 88 -     21811 T
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Propithecus_verreauxi.k141_956661                            427 67 -      6182 T
e Propithecus_tattersalli.k141_790011                        24182 67 -     67325 T
e Propithecus_perrieri.k141_1200571                            370 67 -     24134 T
e Propithecus_edwardsi.k141_1176054                          22187 67 +     35766 T
e Propithecus_diadema.k141_357118                              829 67 +      4256 T
e Propithecus_coronatus.k141_347390                          24668 67 +     38485 T
e Propithecus_coquerelli.NW_012148875.1                     986379 67 +   2598838 T
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10016 82 -     22811 T
e Presbytis_mitrata.k141_2342859                              9817 77 +     10147 T
e Presbytis_comata.k141_677006                               67990 77 -     81375 T
e Platanista_gangetica.PlaMin_flattened_line_32310           34209 83 +     35617 T
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              455 83 +     22620 T
e Piliocolobus_tephrosceles.PDMG02000141.1                14290710 77 -  14605196 T
e Piliocolobus_kirkii.k141_448987                            34489 77 +     51399 T
e Piliocolobus_gordonorum.k141_381342                        33073 77 +     89929 T
e Piliocolobus_badius.k141_1234363                           38346 77 +     62158 T
e Phocoena_phocoena.PhoPho_flattened_line_24159               8503 83 +     63832 T
e Petromus_typicus.PetTyp_scaffold_42190                     25860 81 -     29689 T
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25316 22 +     32600 T
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8872 65 -     78924 T
e Papio_ursinus.k141_3428135                                  3490 77 +      9205 T
e Papio_papio.k141_802527                                     3591 59 +     27711 T
e Papio_kindae.k141_1936966                                    305 170 +     41871 T
e Papio_hamadryas.Contig39                                20558088 77 +  20919399 T
e Papio_cynocephalus.k141_4307930                             1562 170 +     20448 T
e Papio_anubis.CM001495.2                                183437404 77 + 183742232 T
e Pantholops_hodgsonii.KE114653.1                          1264381 83 -   2937107 T
e Panthera_tigris.KE722367.1                               4716993 65 -   8748460 T
e Panthera_pardus.KV860321.1                                259846 65 +  18783137 T
e Panthera_onca.PanOnc_flattened_line_3271                  147137 65 +    230217 T
e Ovis_canadensis.OviCan_scaffold_2572                      173448 83 -    191736 T
e Ovis_aries.CM001607.2                                   17585027 83 +  44047080 T
e Otocyon_megalotis.JAEUCK010005147.1                       458751 84 -    559221 T
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               6853 82 -     18566 T
e Orcinus_orca.KB316932.1                                  2781456 83 -  10937097 T
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144668 82 +    630418 T
e Odobenus_rosmarus.KB229312.1                              500738 84 -   2017862 T
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1355765 71 +   3988456 T
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744927 65 + 199412804 T
e Nycticebus_coucang.k141_5327727                             2186 65 +      8486 T
e Nycticebus_bengalensis.LG01                            102574500 65 - 196305487 T
e Nyctereutes_procyonoides.CAJHUB010000658.1               9145997 84 -   9404916 T
e Noctilio_leporinus.NocLep_scaffold_251                    756405 82 +    783361 T
e Neophocaena_asiaeorientalis.KZ687982.1                   5865541 83 +   7148211 T
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nasalis_larvatus.k141_413338                                9830 77 +     21681 T
e Nannospalax_galili.KL204047.1                            2025524 76 -   3037898 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186126 87 +    196477 T
e Myotis_myotis.MyoMyo_scaffold_28916                        32630 72 +     33610 T
e Myotis_lucifugus.GL429869.1                              3902071 72 -   4330536 T
e Myotis_davidii.KB100139.1                                1585862 72 -   6019432 T
e Myotis_brandtii.KE162005.1                                278305 72 -  10118263 T
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               297681 84 -  14710649 T
e Muscardinus_avellanarius.MusAve_scaffold_82313              2356 77 +     14296 T
e Murina_feae.MurFea_scaffold_85699                           5135 74 +     14753 T
e Mungos_mungo.MunMun_flattened_line_23663                   31353 65 +     37127 T
e Moschus_moschiferus.MosMos_scaffold_61429                  27434 81 -     27816 T
e Mormoops_blainvillei.MorMeg_scaffold_1417                 137841 83 -    366855 T
e Monodon_monoceros.MonMon_M_scaffold_103                    26585 83 -    437263 T
e Mirza_zaza.k141_952172                                      4682 69 -     37649 T
e Mirounga_angustirostris.MirAng_flattened_line_22144        62449 84 -     63350 T
e Miopithecus_ogouensis.k141_534055                           3817 77 -     28506 T
e Miniopterus_schreibersii.MinSch_scaffold_18080             32985 83 +     64694 T
e Miniopterus_natalensis.LDJU01000034.1                    1849109 83 +   8254450 T
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                13435 83 -     19307 T
e Microgale_talazaci.MicTal_scaffold_6613                    15418  9 -    145209 I
e Microcebus_murinus.CM007674.1                           18283328 70 -  93316391 T
e Mesoplodon_bidens.MesBid_scaffold_108144                    3080 83 +     10310 T
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365              6250 84 +     13704 T
e Megaderma_lyra.MegLyr_scaffold_4542                         6791 64 -    207569 T
e Marmota_marmota.CZRN01000018.1                          33097448 78 -  40650429 T
e Manis_pentadactyla.KN006162.1                              47010 81 -    317179 T
e Manis_javanica.JSZB01003497.1                              15621 81 +    737560 T
e Mandrillus_sphinx.Contig270                               346260 77 +    752769 T
e Mandrillus_leucophaeus.scaffold280                      23932082 77 -  24302211 T
e Macroglossus_sobrinus.MacSob_scaffold_8222                 87576 81 +     94391 T
e Macaca_tonkeana.k141_1498238                               20527 77 -     45290 T
e Macaca_thibetana.k99_7456                                  15730 77 -     15935 T
e Macaca_silenus.Contig273                                  324461 77 -    668171 T
e Macaca_siberu.k141_635500                                   1588 77 -     14993 T
e Macaca_radiata.k141_3680011                                 1787 77 +     20474 T
e Macaca_nigra.k141_1655396                                  74790 77 +     89720 T
e Macaca_nemestrina.KQ007038.1                            25452590 77 -  25927173 T
e Macaca_mulatta.NC_041758.1                             186834029 77 + 187317192 T
e Macaca_maura.k141_2733130                                  18941 77 +     37952 T
e Macaca_leonina.k141_3550399                                10374 77 -     29190 T
e Macaca_fuscata.k119_255327                                   921 77 -     23192 T
e Macaca_fascicularis.k141_814140                            75202 77 -    114318 T
e Macaca_cyclopis.k119_18836                                  7408 77 -     26193 T
e Macaca_assamensis.Contig5                               59670910 77 +  60120075 T
e Macaca_arctoides.k141_2326796                               1650 77 +     40492 T
e Lycaon_pictus.CM007581.1                                17951736 84 -  59628241 T
e Loxodonta_africana.GL010049.1                            4214528 82 -  43346337 T
e Lophocebus_aterrimus.ctg367                              1431466 78 +   1826925 T
e Lipotes_vexillifer.KE559953.1                             267490 80 -    662738 T
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3036119 84 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      22804 70 +     54090 T
e Lepilemur_ruficaudatus.k141_420445                         31660 70 -     32627 T
e Lepilemur_dorsalis.k141_577674                             24749 70 +     45836 T
e Lepilemur_ankaranensis.k141_596936                          6802 70 -     23766 T
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12260 85 -     42476 T
e Kogia_breviceps.KogBre_flattened_line_192630                1679 83 -      3359 T
e Jaculus_jaculus.JH725527.1                               8271383 87 -   9596543 T
e Inia_geoffrensis.IniGeo_flattened_line_48101               22412 83 +     23964 T
e Indri_indri.k141_3655594                                   18168 70 +     31101 T
e Ictidomys_tridecemlineatus.JH393364.1                    7514598 78 -   7955117 T
e Hystrix_cristata.HysCri_scaffold_5660                      80936 83 +    135385 T
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19862 83 -    143317 T
e Hyaena_hyaena.HyaHya_flattened_line_26932                  40617 65 +     55795 T
e Hipposideros_galeritus.HipGal_scaffold_29171               39830 82 +     43066 T
e Hipposideros_armiger.JXIK01000431.1                       108389 82 +   1711038 T
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112051 83 +    128679 T
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 255 82 +       961 T
e Heterocephalus_glaber.JH602082.1                        20659393 83 +  22651954 T
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17496 83 +     36099 T
e Helogale_parvula.HelPar_flattened_line_2585               238152 65 +    327341 T
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   30090 75 +     78134 T
e Glis_glis.GliGli_scaffold_19807                            30363 77 +     49224 T
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_56069               25478 83 +     26054 T
e Galagoides_demidoff.k141_31856                              3212 81 -      3432 T
e Fukomys_damarensis.KN121974.1                             848514 83 +   3816255 T
e Felis_nigripes.FelNig_flattened_line_20823                  5515 65 -     36744 T
e Felis_catus_fca126.CM031415.1                           20191990 65 + 205367284 T
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             24808 83 -     44125 T
e Eschrichtius_robustus.EscRob_flattened_line_8968           10871 83 +    133382 T
e Erythrocebus_patas.Contig38                             21199940 77 -  21539334 T
e Erinaceus_europaeus.JH835339.1                           3325355 79 -   7059049 T
e Equus_przewalskii.KK951119.1                               29602 83 +    498745 T
e Equus_caballus.CM000403.2                               18527587 83 -  39960074 T
e Equus_asinus.JREZ01000139.1                              1279766 83 +   4378816 T
e Eptesicus_fuscus.JH977646.1                              2144081 83 -  14770903 T
e Enhydra_lutris.KZ291758.1                               16325783 81 -  41312741 T
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089018 82 +  10337057 T
e Elaphurus_davidianus.JRFZ01104969.1                       310296 83 +    607251 T
e Eidolon_helvum.KE759718.1                                   7430 82 +     11740 T
e Dolichotis_patagonum.DolPat_scaffold_30833                 31504 83 -     42551 T
e Dipodomys_stephensi.DipSte_scaffold_75855                  12030 83 +     14536 T
e Dipodomys_ordii.KN672350.1                              18895820 83 +  37912305 T
e Dinomys_branickii.DinBra_scaffold_21862                    34287 77 +     67921 T
e Diceros_bicornis.DicBicMic_scaffold_5955                    2499 83 +    198055 T
e Dicerorhinus_sumatrensis.PEKH010002091.1                  669424 83 +   1390856 T
e Desmodus_rotundus.KZ672289.1                             8627924 83 +  20541912 T
e Delphinapterus_leucas.KZ290073.1                        16811195 83 +  35494412 T
e Daubentonia_madagascariensis.ctg71                      12532896 70 -  12879189 T
e Dasypus_novemcinctus.JH564415.1                            61086 85 +   2246927 T
e Dasyprocta_punctata.DasPun_flattened_line_206793            1247 83 +      3576 T
e Cuniculus_paca.CunPac_flattened_line_231100                 2864 83 +      5455 T
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             24235 65 -     87169 T
e Crocidura_indochinensis.CroInd_scaffold_287352               379 52 +      4208 T
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          10509 80 -     20389 T
e Condylura_cristata.JH655891.1                           17545999 82 -  53390261 T
e Colobus_polykomos.k141_906115                              31777 104 +     84244 T
e Colobus_guereza.LG01                                   199944908 129 + 200372422 T
e Colobus_angolensis.KN981557.1                            1905238 77 +   2368649 T
e Choloepus_hoffmanni.KN194906.1                            170274 87 +    839153 T
e Choloepus_didactylus.ChoDid_scaffold_45914                 15175 87 +     19366 T
e Chlorocebus_sabaeus.CM001947.1                         135416709 77 + 135778131 T
e Chlorocebus_pygerythrus.k141_1025673                        9704 77 -     50209 T
e Chlorocebus_aethiops.ctg25                              18423261 77 -  18827391 T
e Chinchilla_lanigera.JH722012.1                           1248509 80 +   2543920 T
e Cheirogaleus_medius.k141_1055463                           12075 66 +     57038 T
e Cheirogaleus_major.k141_333249                             16726 66 -     52598 T
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            4816 68 -      6351 T
e Cercopithecus_roloway.k141_3180641                         39792 77 -     41420 T
e Cercopithecus_pogonias.k141_822820                          9298 77 +     17596 T
e Cercopithecus_petaurista.k141_807961                        9322 77 -     27947 T
e Cercopithecus_nictitans.k141_3278028                        1809 77 +      7159 T
e Cercopithecus_neglectus.k141_2526306                       34517 77 -     53127 T
e Cercopithecus_mona.ctg39                                21217397 77 -  21565898 T
e Cercopithecus_albogularis.ctg5                                38811706 77 +  39242232 T
e Cercopithecus_lowei.k141_457449                             9330 77 -     11289 T
e Cercopithecus_hamlyni.k141_187466                           9311 77 -     27936 T
e Cercopithecus_diana.k141_2427854                             976 77 +      9989 T
e Cercopithecus_cephus.k141_1078548                           6623 77 +     29689 T
e Cercopithecus_ascanius.k141_1024104                         3639 77 -     20310 T
e Cercocebus_torquatus.k141_3057011                           3493 77 +     27781 T
e Cercocebus_lunulatus.k141_3846941                           3263 77 +      8260 T
e Cercocebus_chrysogaster.k141_393940                         8844 77 -     19203 T
e Cercocebus_atys.KQ010504.1                               4470295 77 +   4669795 T
e Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2609 83 -      3715 T
e Cephalopachus_bancanus.k141_2037105                         4971 83 -      8605 T
e Cavia_tschudii.CavTsc_scaffold_8919                        98614 82 +    143979 T
e Cavia_porcellus.DS562891.1                              18359739 82 -  23407841 T
e Cavia_aperea.AVPZ01000300.1                             18347479 82 -  23392119 T
e Catagonus_wagneri.CatWag_scaffold_2839                     89266 124 +    217609 T
e Castor_canadensis.CasCan_scaffold_2074                    133658 80 +    179628 T
e Carollia_perspicillata.CarPer_scaffold_92756                2893 83 -     11696 T
e Carlito_syrichta.NW_007259797.1                           141055 83 -    496798 T
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18060012 83 -  44709034 T
e Capra_aegagrus.CM003241.1                               18829292 83 +  46296322 T
e Canis_lupus_orion.HG994398.1                            18496797 84 +  63665305 T
e Canis_lupus_familiaris.chr16                            17955496 84 -  59632846 T
e Canis_lupus_dingo.QKWQ01000480.1                         9031232 84 -   9314153 T
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    181845 84 -    185531 T
e CanFam4.chr16                                           17795788 84 -  60362399 T
e Camelus_ferus.KB017975.1                                  399658 83 -   1652518 T
e Camelus_dromedarius.KN272107.1                           2331382 83 -   7040546 T
e Camelus_bactrianus.KN276810.1                            9998918 83 -  17673402 T
e Bubalus_bubalis.KI419123.1                               2818467 83 +   4408762 T
e Bos_taurus.CM000203.6                                   18082978 83 +  45695690 T
e Bos_mutus.JH880303.1                                     1124900 83 -   1948126 T
e Bos_indicus.CM003047.1                                  20272340 83 +  48749331 T
e Bison_bison.KN261452.1                                    199135 83 -    288883 T
e Beatragus_hunteri.BeaHun_scaffold_50177                    26096 83 +     34529 T
e Balaenoptera_bonaerensis.DF707048.1                         2025 83 -     18090 T
e Balaenoptera_acutorostrata.KI537508.1                   15191559 83 +  23207421 T
e Avahi_peyrierasi.k141_1424874                              49933 67 +     85213 T
e Avahi_laniger.k141_765380                                  49308 67 -     92717 T
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  2475 83 +     43469 T
e Arctocebus_calabarensis.k141_288239                        14449 70 +     17124 T
e Aplodontia_rufa.AprRuf_scaffold_68852                       7278 78 +     20879 T
e Antilocapra_americana.AntAmePen_scaffold_12469             97626 83 -    100397 T
e Anoura_caudifer.AnoCau_scaffold_1412                      183123 83 +    412891 T
e Ammotragus_lervia.NIVO01071767.1                          675174 83 -   2318259 T
e Allochrocebus_solatus.k141_166128                            534 77 -     12518 T
e Allochrocebus_preussi.k141_310680                           9377 77 -      9772 T
e Allochrocebus_lhoesti.k141_4309873                          9251 77 -     28001 T
e Allenopithecus_nigroviridis.k141_3361533                    9324 77 -     52922 T
e Allactaga_bullata.AllBul_scaffold_9566                     65003 87 -     89534 T
e Ailurus_fulgens.LNAC01001112.1                             75224 84 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9507000 83 -  29979442 T
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           823290 65 -   1699592 T

a score=0.000000
s hg38.chrUn_KI270753v1                                        937 1 +     62944 A
s Gorilla_beringei.k141_2022027                               1866 1 +      3305 A
i Gorilla_beringei.k141_2022027                          I 32 C 0
s Gorilla_gorilla.CYUI03001814.1                             26501 1 -     31004 a
i Gorilla_gorilla.CYUI03001814.1                         T 150 I 454
s Pan_paniscus.KQ411613.1                                    38428 1 +     80009 A
i Pan_paniscus.KQ411613.1                                C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Loris_tardigradus.ctg83                                   999532 66 +   6120653 T
e Loris_lydekkerianus.k141_2539221                             696 65 +     11245 T
e Perodicticus_potto.k141_1092580                             3050 70 +     25941 T
e Perodicticus_ibeanus.k141_855320                            4682 70 +     13100 T
e Ziphius_cavirostris.ZipCav_flattened_line_71469            11395 83 +     12536 T
e Zapus_hudsonius.ZapHud_scaffold_11398                      10016 86 +     63895 T
e Zalophus_californianus.ZalCal_flattened_line_63728          1860 84 +      2932 T
e Xerus_inauris.XerIna_scaffold_48378                        19735 78 -     24430 T
e Vulpes_lagopus.VulLag_flattened_line_30954                  7412 84 -     43706 T
e Vicugna_pacos.KN270157.1                                 5368407 83 -   5488506 T
e Varecia_variegata.k141_1128296                              7155 0 +     24756 C
e Varecia_rubra.k141_590885                                   7107 0 +     50397 C
e Ursus_maritimus.KK499267.1                               4846935 84 -   5085361 T
e Uropsilus_gracilis.UroGra_scaffold_97021                    1934 83 -      4736 T
e Tursiops_truncatus.MRVK01000835.1                       15737703 83 +  33153633 T
e Tupaia_tana.TupTan_flattened_line_97126                     3223 81 -     10553 T
e Tupaia_chinensis.KB320699.1                              2149632 109 +   4065304 T
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                    686 71 -      1748 T
e Trachypithecus_pileatus.k141_2007326                        2953 77 +     20839 T
e Trachypithecus_phayrei.ctg124                            5933708 77 +   6242583 T
e Trachypithecus_obscurus.k141_190785                        19611 77 +     32220 T
e Trachypithecus_melamera.k141_434728                         1293 77 +      9834 T
e Trachypithecus_leucocephalus.k141_587342                    2140 77 -     10723 T
e Trachypithecus_laotum.k141_907409                           3438 77 -     21137 T
e Trachypithecus_hatinhensis.k141_143409                      9702 77 -     18194 T
e Trachypithecus_germaini.k141_912491                         9762 77 -     27529 T
e Trachypithecus_geei.k141_277701                            42290 77 -     60166 T
e Trachypithecus_francoisi.k141_1412647                       2171 77 -     19997 T
e Trachypithecus_cristatus.k141_580354                        5741 74 +     19930 T
e Trachypithecus_crepusculus.k141_1194022                     9836 77 +     15221 T
e Trachypithecus_auratus.k141_722599                          5641 74 -     20410 T
e Tonatia_saurophila.TonSau_scaffold_294                     78979 83 +    610378 T
e Tolypeutes_matacus.TolMat_scaffold_228639                   1874 68 +      8208 T
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103202 82 +    114563 T
e Theropithecus_gelada.CM009954.1                        186422913 77 + 186847797 T
e Tarsius_wallacei.k141_780063                               14975 83 +     25099 T
e Tarsius_lariang.k141_2201908                               10670 83 +     70052 T
e Tapirus_terrestris.TapTer_scaffold_755                    383676 83 +    539355 T
e Tapirus_indicus.TapInd_scaffold_9301                      115221 83 -    156842 T
e Tamandua_tetradactyla.TamTet_scaffold_1782                 69488 87 +    116680 T
e Tadarida_brasiliensis.TadBra_scaffold_25820                 6838 82 +     41958 T
e Symphalangus_syndactylus.tarseq_199                      1087967 1 -   1523678 I
e Sus_scrofa.CM000828.4                                   62882475 70 -  69701581 T
e Suricata_suricatta.SurSur_flattened_line_6629              14222 65 -    196729 T
e Spilogale_gracilis.SpiGra_flattened_line_13525             27234 83 +     97271 T
e Spermophilus_dauricus.KZ294078.1                         1948240 78 -   3870691 T
e Sorex_araneus.JH798187.1                                13647036 64 -  18376816 T
e Solenodon_paradoxus.SolPar_flattened_line_5840            187706 83 -    191337 T
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Semnopithecus_vetulus.k141_1200928                          9907 77 +     15514 T
e Semnopithecus_schistaceus.k141_1584426                      1647 77 +      7198 T
e Semnopithecus_priam.k141_638794                             1585 77 -     19483 T
e Semnopithecus_johnii.k141_670120                            2063 77 +     27826 T
e Semnopithecus_hypoleucos.k141_1615806                      21539 77 +     39453 T
e Semnopithecus_entellus.k141_11662                          14334 77 -     19888 T
e Scalopus_aquaticus.ScaAqu_scaffold_662                    151381 45 -    313613 T
e Saiga_tatarica.SaiTat_scaffold_373180                       3569 82 +      4321 T
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                84685 82 -     96226 T
e Rhinopithecus_strykeri.ctg102                            7666510 297 +   7961872 T
e Rhinopithecus_roxellana.NC_044550.1                     91230862 357 - 195417433 T
e Rhinopithecus_bieti.k119_217274                             1505 377 -     11128 T
e Rhinolophus_sinicus.LVEH01000134.1                        366934 83 -   3329780 T
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4916 82 +     55207 T
e Pygathrix_nigripes_a.k141_215492                              9792 77 -     72585 T
e Pygathrix_nigripes_b.ctg100                                 7603953 77 +   7812017 T
e Pygathrix_cinerea.k141_1153803                              9819 77 -     91421 T
e Puma_concolor.QAVW01001104.1                            20270304 65 -  38429054 T
e Pteropus_vampyrus.KN534172.1                                1636 81 -      8028 T
e Pteropus_alecto.KB030862.1                              22973699 81 +  28871421 T
e Pteronura_brasiliensis.PteBra_flattened_line_31117         36692 84 +     42204 T
e Pteronotus_parnellii.KE909381.1                            11228 88 -     21811 T
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Propithecus_verreauxi.k141_956661                            427 67 -      6182 T
e Propithecus_tattersalli.k141_790011                        24182 67 -     67325 T
e Propithecus_perrieri.k141_1200571                            370 67 -     24134 T
e Propithecus_edwardsi.k141_1176054                          22187 67 +     35766 T
e Propithecus_diadema.k141_357118                              829 67 +      4256 T
e Propithecus_coronatus.k141_347390                          24668 67 +     38485 T
e Propithecus_coquerelli.NW_012148875.1                     986379 67 +   2598838 T
e Prolemur_simus.MPIZ01000396.1                            2592414 0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10016 82 -     22811 T
e Presbytis_mitrata.k141_2342859                              9817 77 +     10147 T
e Presbytis_comata.k141_677006                               67990 77 -     81375 T
e Pongo_pygmaeus.ctg66                                     9565246 0 +   9816681 C
e Pongo_abelii.CM009266.2                                189125335 307 + 189387572 I
e Platanista_gangetica.PlaMin_flattened_line_32310           34209 83 +     35617 T
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              455 83 +     22620 T
e Piliocolobus_tephrosceles.PDMG02000141.1                14290710 77 -  14605196 T
e Piliocolobus_kirkii.k141_448987                            34489 77 +     51399 T
e Piliocolobus_gordonorum.k141_381342                        33073 77 +     89929 T
e Piliocolobus_badius.k141_1234363                           38346 77 +     62158 T
e Phocoena_phocoena.PhoPho_flattened_line_24159               8503 83 +     63832 T
e Petromus_typicus.PetTyp_scaffold_42190                     25860 81 -     29689 T
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25316 22 +     32600 T
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8872 65 -     78924 T
e Papio_ursinus.k141_3428135                                  3490 77 +      9205 T
e Papio_papio.k141_802527                                     3591 59 +     27711 T
e Papio_kindae.k141_1936966                                    305 170 +     41871 T
e Papio_hamadryas.Contig39                                20558088 77 +  20919399 T
e Papio_cynocephalus.k141_4307930                             1562 170 +     20448 T
e Papio_anubis.CM001495.2                                183437404 77 + 183742232 T
e Pantholops_hodgsonii.KE114653.1                          1264381 83 -   2937107 T
e Panthera_tigris.KE722367.1                               4716993 65 -   8748460 T
e Panthera_pardus.KV860321.1                                259846 65 +  18783137 T
e Panthera_onca.PanOnc_flattened_line_3271                  147137 65 +    230217 T
e Pan_troglodytes.CM009242.2                             189137460 1 + 189151597 I
e Ovis_canadensis.OviCan_scaffold_2572                      173448 83 -    191736 T
e Ovis_aries.CM001607.2                                   17585027 83 +  44047080 T
e Otocyon_megalotis.JAEUCK010005147.1                       458751 84 -    559221 T
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               6853 82 -     18566 T
e Orcinus_orca.KB316932.1                                  2781456 83 -  10937097 T
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144668 82 +    630418 T
e Odobenus_rosmarus.KB229312.1                              500738 84 -   2017862 T
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1355765 71 +   3988456 T
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744927 65 + 199412804 T
e Nycticebus_coucang.k141_5327727                             2186 65 +      8486 T
e Nycticebus_bengalensis.LG01                            102574500 65 - 196305487 T
e Nyctereutes_procyonoides.CAJHUB010000658.1               9145997 84 -   9404916 T
e Noctilio_leporinus.NocLep_scaffold_251                    756405 82 +    783361 T
e Neophocaena_asiaeorientalis.KZ687982.1                   5865541 83 +   7148211 T
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nasalis_larvatus.k141_413338                                9830 77 +     21681 T
e Nannospalax_galili.KL204047.1                            2025524 76 -   3037898 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186126 87 +    196477 T
e Myotis_myotis.MyoMyo_scaffold_28916                        32630 72 +     33610 T
e Myotis_lucifugus.GL429869.1                              3902071 72 -   4330536 T
e Myotis_davidii.KB100139.1                                1585862 72 -   6019432 T
e Myotis_brandtii.KE162005.1                                278305 72 -  10118263 T
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               297681 84 -  14710649 T
e Muscardinus_avellanarius.MusAve_scaffold_82313              2356 77 +     14296 T
e Murina_feae.MurFea_scaffold_85699                           5135 74 +     14753 T
e Mungos_mungo.MunMun_flattened_line_23663                   31353 65 +     37127 T
e Moschus_moschiferus.MosMos_scaffold_61429                  27434 81 -     27816 T
e Mormoops_blainvillei.MorMeg_scaffold_1417                 137841 83 -    366855 T
e Monodon_monoceros.MonMon_M_scaffold_103                    26585 83 -    437263 T
e Mirza_zaza.k141_952172                                      4682 69 -     37649 T
e Mirounga_angustirostris.MirAng_flattened_line_22144        62449 84 -     63350 T
e Miopithecus_ogouensis.k141_534055                           3817 77 -     28506 T
e Miniopterus_schreibersii.MinSch_scaffold_18080             32985 83 +     64694 T
e Miniopterus_natalensis.LDJU01000034.1                    1849109 83 +   8254450 T
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                13435 83 -     19307 T
e Microgale_talazaci.MicTal_scaffold_6613                    15418 9 -    145209 I
e Microcebus_murinus.CM007674.1                           18283328 70 -  93316391 T
e Mesoplodon_bidens.MesBid_scaffold_108144                    3080 83 +     10310 T
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365              6250 84 +     13704 T
e Megaderma_lyra.MegLyr_scaffold_4542                         6791 64 -    207569 T
e Marmota_marmota.CZRN01000018.1                          33097448 78 -  40650429 T
e Manis_pentadactyla.KN006162.1                              47010 81 -    317179 T
e Manis_javanica.JSZB01003497.1                              15621 81 +    737560 T
e Mandrillus_sphinx.Contig270                               346260 77 +    752769 T
e Mandrillus_leucophaeus.scaffold280                      23932082 77 -  24302211 T
e Macroglossus_sobrinus.MacSob_scaffold_8222                 87576 81 +     94391 T
e Macaca_tonkeana.k141_1498238                               20527 77 -     45290 T
e Macaca_thibetana.k99_7456                                  15730 77 -     15935 T
e Macaca_silenus.Contig273                                  324461 77 -    668171 T
e Macaca_siberu.k141_635500                                   1588 77 -     14993 T
e Macaca_radiata.k141_3680011                                 1787 77 +     20474 T
e Macaca_nigra.k141_1655396                                  74790 77 +     89720 T
e Macaca_nemestrina.KQ007038.1                            25452590 77 -  25927173 T
e Macaca_mulatta.NC_041758.1                             186834029 77 + 187317192 T
e Macaca_maura.k141_2733130                                  18941 77 +     37952 T
e Macaca_leonina.k141_3550399                                10374 77 -     29190 T
e Macaca_fuscata.k119_255327                                   921 77 -     23192 T
e Macaca_fascicularis.k141_814140                            75202 77 -    114318 T
e Macaca_cyclopis.k119_18836                                  7408 77 -     26193 T
e Macaca_assamensis.Contig5                               59670910 77 +  60120075 T
e Macaca_arctoides.k141_2326796                               1650 77 +     40492 T
e Lycaon_pictus.CM007581.1                                17951736 84 -  59628241 T
e Loxodonta_africana.GL010049.1                            4214528 82 -  43346337 T
e Lophocebus_aterrimus.ctg367                              1431466 78 +   1826925 T
e Lipotes_vexillifer.KE559953.1                             267490 80 -    662738 T
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3036119 84 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      22804 70 +     54090 T
e Lepilemur_ruficaudatus.k141_420445                         31660 70 -     32627 T
e Lepilemur_dorsalis.k141_577674                             24749 70 +     45836 T
e Lepilemur_ankaranensis.k141_596936                          6802 70 -     23766 T
e Lemur_catta.scaffold_24                                 15519761 0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12260 85 -     42476 T
e Kogia_breviceps.KogBre_flattened_line_192630                1679 83 -      3359 T
e Jaculus_jaculus.JH725527.1                               8271383 87 -   9596543 T
e Inia_geoffrensis.IniGeo_flattened_line_48101               22412 83 +     23964 T
e Indri_indri.k141_3655594                                   18168 70 +     31101 T
e Ictidomys_tridecemlineatus.JH393364.1                    7514598 78 -   7955117 T
e Hystrix_cristata.HysCri_scaffold_5660                      80936 83 +    135385 T
e Hylobates_pileatus_a.tarseq_633                            3330820 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189537722 205 - 191637585 I
e Hylobates_klossii.k141_282416                              54275 0 +     67168 C
e Hylobates_agilis.k141_307679                               12270 0 -     15490 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19862 83 -    143317 T
e Hyaena_hyaena.HyaHya_flattened_line_26932                  40617 65 +     55795 T
e Hoolock_leuconedys.ctg274                                    429352 0 +    630532 C
e Hipposideros_galeritus.HipGal_scaffold_29171               39830 82 +     43066 T
e Hipposideros_armiger.JXIK01000431.1                       108389 82 +   1711038 T
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112051 83 +    128679 T
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 255 82 +       961 T
e Heterocephalus_glaber.JH602082.1                        20659393 83 +  22651954 T
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17496 83 +     36099 T
e Helogale_parvula.HelPar_flattened_line_2585               238152 65 +    327341 T
e Hapalemur_occidentalis.k141_907772                          9234 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402 0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298 0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517 0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   30090 75 +     78134 T
e Glis_glis.GliGli_scaffold_19807                            30363 77 +     49224 T
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_56069               25478 83 +     26054 T
e Galagoides_demidoff.k141_31856                              3212 81 -      3432 T
e Fukomys_damarensis.KN121974.1                             848514 83 +   3816255 T
e Felis_nigripes.FelNig_flattened_line_20823                  5515 65 -     36744 T
e Felis_catus_fca126.CM031415.1                           20191990 65 + 205367284 T
e Eulemur_sanfordi.k141_1122526                               9432 0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267 0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247 0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321 0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369 0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369 0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184 0 -     25546 C
e Eulemur_collaris.k141_377015                                2154 0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453 0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             24808 83 -     44125 T
e Eschrichtius_robustus.EscRob_flattened_line_8968           10871 83 +    133382 T
e Erythrocebus_patas.Contig38                             21199940 77 -  21539334 T
e Erinaceus_europaeus.JH835339.1                           3325355 79 -   7059049 T
e Equus_przewalskii.KK951119.1                               29602 83 +    498745 T
e Equus_caballus.CM000403.2                               18527587 83 -  39960074 T
e Equus_asinus.JREZ01000139.1                              1279766 83 +   4378816 T
e Eptesicus_fuscus.JH977646.1                              2144081 83 -  14770903 T
e Enhydra_lutris.KZ291758.1                               16325783 81 -  41312741 T
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089018 82 +  10337057 T
e Elaphurus_davidianus.JRFZ01104969.1                       310296 83 +    607251 T
e Eidolon_helvum.KE759718.1                                   7430 82 +     11740 T
e Dolichotis_patagonum.DolPat_scaffold_30833                 31504 83 -     42551 T
e Dipodomys_stephensi.DipSte_scaffold_75855                  12030 83 +     14536 T
e Dipodomys_ordii.KN672350.1                              18895820 83 +  37912305 T
e Dinomys_branickii.DinBra_scaffold_21862                    34287 77 +     67921 T
e Diceros_bicornis.DicBicMic_scaffold_5955                    2499 83 +    198055 T
e Dicerorhinus_sumatrensis.PEKH010002091.1                  669424 83 +   1390856 T
e Desmodus_rotundus.KZ672289.1                             8627924 83 +  20541912 T
e Delphinapterus_leucas.KZ290073.1                        16811195 83 +  35494412 T
e Daubentonia_madagascariensis.ctg71                      12532896 70 -  12879189 T
e Dasypus_novemcinctus.JH564415.1                            61086 85 +   2246927 T
e Dasyprocta_punctata.DasPun_flattened_line_206793            1247 83 +      3576 T
e Cuniculus_paca.CunPac_flattened_line_231100                 2864 83 +      5455 T
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             24235 65 -     87169 T
e Crocidura_indochinensis.CroInd_scaffold_287352               379 52 +      4208 T
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          10509 80 -     20389 T
e Condylura_cristata.JH655891.1                           17545999 82 -  53390261 T
e Colobus_polykomos.k141_906115                              31777 104 +     84244 T
e Colobus_guereza.LG01                                   199944908 129 + 200372422 T
e Colobus_angolensis.KN981557.1                            1905238 77 +   2368649 T
e Choloepus_hoffmanni.KN194906.1                            170274 87 +    839153 T
e Choloepus_didactylus.ChoDid_scaffold_45914                 15175 87 +     19366 T
e Chlorocebus_sabaeus.CM001947.1                         135416709 77 + 135778131 T
e Chlorocebus_pygerythrus.k141_1025673                        9704 77 -     50209 T
e Chlorocebus_aethiops.ctg25                              18423261 77 -  18827391 T
e Chinchilla_lanigera.JH722012.1                           1248509 80 +   2543920 T
e Cheirogaleus_medius.k141_1055463                           12075 66 +     57038 T
e Cheirogaleus_major.k141_333249                             16726 66 -     52598 T
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            4816 68 -      6351 T
e Cercopithecus_roloway.k141_3180641                         39792 77 -     41420 T
e Cercopithecus_pogonias.k141_822820                          9298 77 +     17596 T
e Cercopithecus_petaurista.k141_807961                        9322 77 -     27947 T
e Cercopithecus_nictitans.k141_3278028                        1809 77 +      7159 T
e Cercopithecus_neglectus.k141_2526306                       34517 77 -     53127 T
e Cercopithecus_mona.ctg39                                21217397 77 -  21565898 T
e Cercopithecus_albogularis.ctg5                                38811706 77 +  39242232 T
e Cercopithecus_lowei.k141_457449                             9330 77 -     11289 T
e Cercopithecus_hamlyni.k141_187466                           9311 77 -     27936 T
e Cercopithecus_diana.k141_2427854                             976 77 +      9989 T
e Cercopithecus_cephus.k141_1078548                           6623 77 +     29689 T
e Cercopithecus_ascanius.k141_1024104                         3639 77 -     20310 T
e Cercocebus_torquatus.k141_3057011                           3493 77 +     27781 T
e Cercocebus_lunulatus.k141_3846941                           3263 77 +      8260 T
e Cercocebus_chrysogaster.k141_393940                         8844 77 -     19203 T
e Cercocebus_atys.KQ010504.1                               4470295 77 +   4669795 T
e Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2609 83 -      3715 T
e Cephalopachus_bancanus.k141_2037105                         4971 83 -      8605 T
e Cavia_tschudii.CavTsc_scaffold_8919                        98614 82 +    143979 T
e Cavia_porcellus.DS562891.1                              18359739 82 -  23407841 T
e Cavia_aperea.AVPZ01000300.1                             18347479 82 -  23392119 T
e Catagonus_wagneri.CatWag_scaffold_2839                     89266 124 +    217609 T
e Castor_canadensis.CasCan_scaffold_2074                    133658 80 +    179628 T
e Carollia_perspicillata.CarPer_scaffold_92756                2893 83 -     11696 T
e Carlito_syrichta.NW_007259797.1                           141055 83 -    496798 T
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18060012 83 -  44709034 T
e Capra_aegagrus.CM003241.1                               18829292 83 +  46296322 T
e Canis_lupus_orion.HG994398.1                            18496797 84 +  63665305 T
e Canis_lupus_familiaris.chr16                            17955496 84 -  59632846 T
e Canis_lupus_dingo.QKWQ01000480.1                         9031232 84 -   9314153 T
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    181845 84 -    185531 T
e CanFam4.chr16                                           17795788 84 -  60362399 T
e Camelus_ferus.KB017975.1                                  399658 83 -   1652518 T
e Camelus_dromedarius.KN272107.1                           2331382 83 -   7040546 T
e Camelus_bactrianus.KN276810.1                            9998918 83 -  17673402 T
e Bubalus_bubalis.KI419123.1                               2818467 83 +   4408762 T
e Bos_taurus.CM000203.6                                   18082978 83 +  45695690 T
e Bos_mutus.JH880303.1                                     1124900 83 -   1948126 T
e Bos_indicus.CM003047.1                                  20272340 83 +  48749331 T
e Bison_bison.KN261452.1                                    199135 83 -    288883 T
e Beatragus_hunteri.BeaHun_scaffold_50177                    26096 83 +     34529 T
e Balaenoptera_bonaerensis.DF707048.1                         2025 83 -     18090 T
e Balaenoptera_acutorostrata.KI537508.1                   15191559 83 +  23207421 T
e Avahi_peyrierasi.k141_1424874                              49933 67 +     85213 T
e Avahi_laniger.k141_765380                                  49308 67 -     92717 T
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  2475 83 +     43469 T
e Arctocebus_calabarensis.k141_288239                        14449 70 +     17124 T
e Aplodontia_rufa.AprRuf_scaffold_68852                       7278 78 +     20879 T
e Antilocapra_americana.AntAmePen_scaffold_12469             97626 83 -    100397 T
e Anoura_caudifer.AnoCau_scaffold_1412                      183123 83 +    412891 T
e Ammotragus_lervia.NIVO01071767.1                          675174 83 -   2318259 T
e Allochrocebus_solatus.k141_166128                            534 77 -     12518 T
e Allochrocebus_preussi.k141_310680                           9377 77 -      9772 T
e Allochrocebus_lhoesti.k141_4309873                          9251 77 -     28001 T
e Allenopithecus_nigroviridis.k141_3361533                    9324 77 -     52922 T
e Allactaga_bullata.AllBul_scaffold_9566                     65003 87 -     89534 T
e Ailurus_fulgens.LNAC01001112.1                             75224 84 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9507000 83 -  29979442 T
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           823290 65 -   1699592 T

a score=0.000000
s hg38.chrUn_KI270753v1                                        938 44 +     62944 A--TGAATCACATGAAACAGAATAGTTCCCTTGTCAC------CGAGTAGAA
s Gorilla_beringei.k141_2022027                               1867 29 +      3305 AA-TGAATCACATGACACAGAATGGTTCCA----------------------
i Gorilla_beringei.k141_2022027                          C 0 T 176
s Gorilla_gorilla.CYUI03001814.1                             26956 51 -     31004 a-atgaatcacatgaaacagaatgattccgttgtcactgGAGTTGAGTAgaa
i Gorilla_gorilla.CYUI03001814.1                         I 454 I 5
s Hoolock_leuconedys.ctg274                                    429352 45 +    630532 AA-TGAATCACAGGAAACAGAATGGTTCCATTGTCAC------CGAGTAGAA
i Hoolock_leuconedys.ctg274                                 C 0 T 206
s Hylobates_agilis.k141_307679                               12270 45 -     15490 AA-TGAATCACATGAAATGGAATGGTTCCATTGTCAC------CTAGTAGAA
i Hylobates_agilis.k141_307679                           C 0 T 206
s Hylobates_klossii.k141_282416                              54275 45 +     67168 AA-TGAATCACATGAAATGGAATGGTTCCATTGTCAC------CTAGTAGAA
i Hylobates_klossii.k141_282416                          C 0 T 206
s Hylobates_pileatus_b.LG02                                     189537927 45 - 191637585 AA-TGAATCACATGAAATGGAATGGTTCCATTGTCAC------CTAGTAGAA
i Hylobates_pileatus_b.LG02                                     I 205 T 205
s Hylobates_pileatus_a.tarseq_633                            3330820 45 -  11177569 AA-TGAATCACATGAAATGGAATGGTTCCATTGTCAC------CTAGTAGAA
i Hylobates_pileatus_a.tarseq_633                          C 0 T 206
s Pan_paniscus.KQ411613.1                                    38429 45 +     80009 a-atgaatcacaggaaacagaattgttacattgtcac------tgagtagaa
i Pan_paniscus.KQ411613.1                                C 0 T 2338
s Pan_troglodytes.CM009242.2                             189137461 44 + 189151597 a--tgaatcacatgaaacggagtggttccgttgtcac------tgagtagaa
i Pan_troglodytes.CM009242.2                             I 1 T 417
s Pongo_abelii.CM009266.2                                189125642 45 + 189387572 AA-TGAATCACATGAAACAAAATGGTTCCATTGTCAC------CAAGTAGAA
i Pongo_abelii.CM009266.2                                I 307 T 513
s Pongo_pygmaeus.ctg66                                     9565246 45 +   9816681 AA-TGAATCACATGAAACAAAATGGTTCCATTGTCAC------CAAGTAGAA
i Pongo_pygmaeus.ctg66                                   C 0 T 274
s Symphalangus_syndactylus.tarseq_199                      1087968 45 -   1523678 AA-TGAATCACATGAAACGGAATGGTTCCATTGTCAC------CGAGTAGAA
i Symphalangus_syndactylus.tarseq_199                    I 1 T 207
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Loris_tardigradus.ctg83                                   999532 66 +   6120653 T
e Loris_lydekkerianus.k141_2539221                             696 65 +     11245 T
e Perodicticus_potto.k141_1092580                             3050 70 +     25941 T
e Perodicticus_ibeanus.k141_855320                            4682 70 +     13100 T
e Ziphius_cavirostris.ZipCav_flattened_line_71469            11395 83 +     12536 T
e Zapus_hudsonius.ZapHud_scaffold_11398                      10016 86 +     63895 T
e Zalophus_californianus.ZalCal_flattened_line_63728          1860 84 +      2932 T
e Xerus_inauris.XerIna_scaffold_48378                        19735 78 -     24430 T
e Vulpes_lagopus.VulLag_flattened_line_30954                  7412 84 -     43706 T
e Vicugna_pacos.KN270157.1                                 5368407 83 -   5488506 T
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Ursus_maritimus.KK499267.1                               4846935 84 -   5085361 T
e Uropsilus_gracilis.UroGra_scaffold_97021                    1934 83 -      4736 T
e Tursiops_truncatus.MRVK01000835.1                       15737703 83 +  33153633 T
e Tupaia_tana.TupTan_flattened_line_97126                     3223 81 -     10553 T
e Tupaia_chinensis.KB320699.1                              2149632 109 +   4065304 T
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                    686 71 -      1748 T
e Trachypithecus_pileatus.k141_2007326                        2953 77 +     20839 T
e Trachypithecus_phayrei.ctg124                            5933708 77 +   6242583 T
e Trachypithecus_obscurus.k141_190785                        19611 77 +     32220 T
e Trachypithecus_melamera.k141_434728                         1293 77 +      9834 T
e Trachypithecus_leucocephalus.k141_587342                    2140 77 -     10723 T
e Trachypithecus_laotum.k141_907409                           3438 77 -     21137 T
e Trachypithecus_hatinhensis.k141_143409                      9702 77 -     18194 T
e Trachypithecus_germaini.k141_912491                         9762 77 -     27529 T
e Trachypithecus_geei.k141_277701                            42290 77 -     60166 T
e Trachypithecus_francoisi.k141_1412647                       2171 77 -     19997 T
e Trachypithecus_cristatus.k141_580354                        5741 74 +     19930 T
e Trachypithecus_crepusculus.k141_1194022                     9836 77 +     15221 T
e Trachypithecus_auratus.k141_722599                          5641 74 -     20410 T
e Tonatia_saurophila.TonSau_scaffold_294                     78979 83 +    610378 T
e Tolypeutes_matacus.TolMat_scaffold_228639                   1874 68 +      8208 T
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103202 82 +    114563 T
e Theropithecus_gelada.CM009954.1                        186422913 77 + 186847797 T
e Tarsius_wallacei.k141_780063                               14975 83 +     25099 T
e Tarsius_lariang.k141_2201908                               10670 83 +     70052 T
e Tapirus_terrestris.TapTer_scaffold_755                    383676 83 +    539355 T
e Tapirus_indicus.TapInd_scaffold_9301                      115221 83 -    156842 T
e Tamandua_tetradactyla.TamTet_scaffold_1782                 69488 87 +    116680 T
e Tadarida_brasiliensis.TadBra_scaffold_25820                 6838 82 +     41958 T
e Sus_scrofa.CM000828.4                                   62882475 70 -  69701581 T
e Suricata_suricatta.SurSur_flattened_line_6629              14222 65 -    196729 T
e Spilogale_gracilis.SpiGra_flattened_line_13525             27234 83 +     97271 T
e Spermophilus_dauricus.KZ294078.1                         1948240 78 -   3870691 T
e Sorex_araneus.JH798187.1                                13647036 64 -  18376816 T
e Solenodon_paradoxus.SolPar_flattened_line_5840            187706 83 -    191337 T
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Semnopithecus_vetulus.k141_1200928                          9907 77 +     15514 T
e Semnopithecus_schistaceus.k141_1584426                      1647 77 +      7198 T
e Semnopithecus_priam.k141_638794                             1585 77 -     19483 T
e Semnopithecus_johnii.k141_670120                            2063 77 +     27826 T
e Semnopithecus_hypoleucos.k141_1615806                      21539 77 +     39453 T
e Semnopithecus_entellus.k141_11662                          14334 77 -     19888 T
e Scalopus_aquaticus.ScaAqu_scaffold_662                    151381 45 -    313613 T
e Saiga_tatarica.SaiTat_scaffold_373180                       3569 82 +      4321 T
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                84685 82 -     96226 T
e Rhinopithecus_strykeri.ctg102                            7666510 297 +   7961872 T
e Rhinopithecus_roxellana.NC_044550.1                     91230862 357 - 195417433 T
e Rhinopithecus_bieti.k119_217274                             1505 377 -     11128 T
e Rhinolophus_sinicus.LVEH01000134.1                        366934 83 -   3329780 T
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4916 82 +     55207 T
e Pygathrix_nigripes_a.k141_215492                              9792 77 -     72585 T
e Pygathrix_nigripes_b.ctg100                                 7603953 77 +   7812017 T
e Pygathrix_cinerea.k141_1153803                              9819 77 -     91421 T
e Puma_concolor.QAVW01001104.1                            20270304 65 -  38429054 T
e Pteropus_vampyrus.KN534172.1                                1636 81 -      8028 T
e Pteropus_alecto.KB030862.1                              22973699 81 +  28871421 T
e Pteronura_brasiliensis.PteBra_flattened_line_31117         36692 84 +     42204 T
e Pteronotus_parnellii.KE909381.1                            11228 88 -     21811 T
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Propithecus_verreauxi.k141_956661                            427 67 -      6182 T
e Propithecus_tattersalli.k141_790011                        24182 67 -     67325 T
e Propithecus_perrieri.k141_1200571                            370 67 -     24134 T
e Propithecus_edwardsi.k141_1176054                          22187 67 +     35766 T
e Propithecus_diadema.k141_357118                              829 67 +      4256 T
e Propithecus_coronatus.k141_347390                          24668 67 +     38485 T
e Propithecus_coquerelli.NW_012148875.1                     986379 67 +   2598838 T
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10016 82 -     22811 T
e Presbytis_mitrata.k141_2342859                              9817 77 +     10147 T
e Presbytis_comata.k141_677006                               67990 77 -     81375 T
e Platanista_gangetica.PlaMin_flattened_line_32310           34209 83 +     35617 T
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              455 83 +     22620 T
e Piliocolobus_tephrosceles.PDMG02000141.1                14290710 77 -  14605196 T
e Piliocolobus_kirkii.k141_448987                            34489 77 +     51399 T
e Piliocolobus_gordonorum.k141_381342                        33073 77 +     89929 T
e Piliocolobus_badius.k141_1234363                           38346 77 +     62158 T
e Phocoena_phocoena.PhoPho_flattened_line_24159               8503 83 +     63832 T
e Petromus_typicus.PetTyp_scaffold_42190                     25860 81 -     29689 T
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25316 22 +     32600 T
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8872 65 -     78924 T
e Papio_ursinus.k141_3428135                                  3490 77 +      9205 T
e Papio_papio.k141_802527                                     3591 59 +     27711 T
e Papio_kindae.k141_1936966                                    305 170 +     41871 T
e Papio_hamadryas.Contig39                                20558088 77 +  20919399 T
e Papio_cynocephalus.k141_4307930                             1562 170 +     20448 T
e Papio_anubis.CM001495.2                                183437404 77 + 183742232 T
e Pantholops_hodgsonii.KE114653.1                          1264381 83 -   2937107 T
e Panthera_tigris.KE722367.1                               4716993 65 -   8748460 T
e Panthera_pardus.KV860321.1                                259846 65 +  18783137 T
e Panthera_onca.PanOnc_flattened_line_3271                  147137 65 +    230217 T
e Ovis_canadensis.OviCan_scaffold_2572                      173448 83 -    191736 T
e Ovis_aries.CM001607.2                                   17585027 83 +  44047080 T
e Otocyon_megalotis.JAEUCK010005147.1                       458751 84 -    559221 T
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               6853 82 -     18566 T
e Orcinus_orca.KB316932.1                                  2781456 83 -  10937097 T
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144668 82 +    630418 T
e Odobenus_rosmarus.KB229312.1                              500738 84 -   2017862 T
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1355765 71 +   3988456 T
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744927 65 + 199412804 T
e Nycticebus_coucang.k141_5327727                             2186 65 +      8486 T
e Nycticebus_bengalensis.LG01                            102574500 65 - 196305487 T
e Nyctereutes_procyonoides.CAJHUB010000658.1               9145997 84 -   9404916 T
e Noctilio_leporinus.NocLep_scaffold_251                    756405 82 +    783361 T
e Neophocaena_asiaeorientalis.KZ687982.1                   5865541 83 +   7148211 T
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nasalis_larvatus.k141_413338                                9830 77 +     21681 T
e Nannospalax_galili.KL204047.1                            2025524 76 -   3037898 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186126 87 +    196477 T
e Myotis_myotis.MyoMyo_scaffold_28916                        32630 72 +     33610 T
e Myotis_lucifugus.GL429869.1                              3902071 72 -   4330536 T
e Myotis_davidii.KB100139.1                                1585862 72 -   6019432 T
e Myotis_brandtii.KE162005.1                                278305 72 -  10118263 T
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               297681 84 -  14710649 T
e Muscardinus_avellanarius.MusAve_scaffold_82313              2356 77 +     14296 T
e Murina_feae.MurFea_scaffold_85699                           5135 74 +     14753 T
e Mungos_mungo.MunMun_flattened_line_23663                   31353 65 +     37127 T
e Moschus_moschiferus.MosMos_scaffold_61429                  27434 81 -     27816 T
e Mormoops_blainvillei.MorMeg_scaffold_1417                 137841 83 -    366855 T
e Monodon_monoceros.MonMon_M_scaffold_103                    26585 83 -    437263 T
e Mirza_zaza.k141_952172                                      4682 69 -     37649 T
e Mirounga_angustirostris.MirAng_flattened_line_22144        62449 84 -     63350 T
e Miopithecus_ogouensis.k141_534055                           3817 77 -     28506 T
e Miniopterus_schreibersii.MinSch_scaffold_18080             32985 83 +     64694 T
e Miniopterus_natalensis.LDJU01000034.1                    1849109 83 +   8254450 T
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                13435 83 -     19307 T
e Microgale_talazaci.MicTal_scaffold_6613                    15418  9 -    145209 I
e Microcebus_murinus.CM007674.1                           18283328 70 -  93316391 T
e Mesoplodon_bidens.MesBid_scaffold_108144                    3080 83 +     10310 T
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365              6250 84 +     13704 T
e Megaderma_lyra.MegLyr_scaffold_4542                         6791 64 -    207569 T
e Marmota_marmota.CZRN01000018.1                          33097448 78 -  40650429 T
e Manis_pentadactyla.KN006162.1                              47010 81 -    317179 T
e Manis_javanica.JSZB01003497.1                              15621 81 +    737560 T
e Mandrillus_sphinx.Contig270                               346260 77 +    752769 T
e Mandrillus_leucophaeus.scaffold280                      23932082 77 -  24302211 T
e Macroglossus_sobrinus.MacSob_scaffold_8222                 87576 81 +     94391 T
e Macaca_tonkeana.k141_1498238                               20527 77 -     45290 T
e Macaca_thibetana.k99_7456                                  15730 77 -     15935 T
e Macaca_silenus.Contig273                                  324461 77 -    668171 T
e Macaca_siberu.k141_635500                                   1588 77 -     14993 T
e Macaca_radiata.k141_3680011                                 1787 77 +     20474 T
e Macaca_nigra.k141_1655396                                  74790 77 +     89720 T
e Macaca_nemestrina.KQ007038.1                            25452590 77 -  25927173 T
e Macaca_mulatta.NC_041758.1                             186834029 77 + 187317192 T
e Macaca_maura.k141_2733130                                  18941 77 +     37952 T
e Macaca_leonina.k141_3550399                                10374 77 -     29190 T
e Macaca_fuscata.k119_255327                                   921 77 -     23192 T
e Macaca_fascicularis.k141_814140                            75202 77 -    114318 T
e Macaca_cyclopis.k119_18836                                  7408 77 -     26193 T
e Macaca_assamensis.Contig5                               59670910 77 +  60120075 T
e Macaca_arctoides.k141_2326796                               1650 77 +     40492 T
e Lycaon_pictus.CM007581.1                                17951736 84 -  59628241 T
e Loxodonta_africana.GL010049.1                            4214528 82 -  43346337 T
e Lophocebus_aterrimus.ctg367                              1431466 78 +   1826925 T
e Lipotes_vexillifer.KE559953.1                             267490 80 -    662738 T
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3036119 84 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      22804 70 +     54090 T
e Lepilemur_ruficaudatus.k141_420445                         31660 70 -     32627 T
e Lepilemur_dorsalis.k141_577674                             24749 70 +     45836 T
e Lepilemur_ankaranensis.k141_596936                          6802 70 -     23766 T
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12260 85 -     42476 T
e Kogia_breviceps.KogBre_flattened_line_192630                1679 83 -      3359 T
e Jaculus_jaculus.JH725527.1                               8271383 87 -   9596543 T
e Inia_geoffrensis.IniGeo_flattened_line_48101               22412 83 +     23964 T
e Indri_indri.k141_3655594                                   18168 70 +     31101 T
e Ictidomys_tridecemlineatus.JH393364.1                    7514598 78 -   7955117 T
e Hystrix_cristata.HysCri_scaffold_5660                      80936 83 +    135385 T
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19862 83 -    143317 T
e Hyaena_hyaena.HyaHya_flattened_line_26932                  40617 65 +     55795 T
e Hipposideros_galeritus.HipGal_scaffold_29171               39830 82 +     43066 T
e Hipposideros_armiger.JXIK01000431.1                       108389 82 +   1711038 T
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112051 83 +    128679 T
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 255 82 +       961 T
e Heterocephalus_glaber.JH602082.1                        20659393 83 +  22651954 T
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17496 83 +     36099 T
e Helogale_parvula.HelPar_flattened_line_2585               238152 65 +    327341 T
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   30090 75 +     78134 T
e Glis_glis.GliGli_scaffold_19807                            30363 77 +     49224 T
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_56069               25478 83 +     26054 T
e Galagoides_demidoff.k141_31856                              3212 81 -      3432 T
e Fukomys_damarensis.KN121974.1                             848514 83 +   3816255 T
e Felis_nigripes.FelNig_flattened_line_20823                  5515 65 -     36744 T
e Felis_catus_fca126.CM031415.1                           20191990 65 + 205367284 T
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             24808 83 -     44125 T
e Eschrichtius_robustus.EscRob_flattened_line_8968           10871 83 +    133382 T
e Erythrocebus_patas.Contig38                             21199940 77 -  21539334 T
e Erinaceus_europaeus.JH835339.1                           3325355 79 -   7059049 T
e Equus_przewalskii.KK951119.1                               29602 83 +    498745 T
e Equus_caballus.CM000403.2                               18527587 83 -  39960074 T
e Equus_asinus.JREZ01000139.1                              1279766 83 +   4378816 T
e Eptesicus_fuscus.JH977646.1                              2144081 83 -  14770903 T
e Enhydra_lutris.KZ291758.1                               16325783 81 -  41312741 T
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089018 82 +  10337057 T
e Elaphurus_davidianus.JRFZ01104969.1                       310296 83 +    607251 T
e Eidolon_helvum.KE759718.1                                   7430 82 +     11740 T
e Dolichotis_patagonum.DolPat_scaffold_30833                 31504 83 -     42551 T
e Dipodomys_stephensi.DipSte_scaffold_75855                  12030 83 +     14536 T
e Dipodomys_ordii.KN672350.1                              18895820 83 +  37912305 T
e Dinomys_branickii.DinBra_scaffold_21862                    34287 77 +     67921 T
e Diceros_bicornis.DicBicMic_scaffold_5955                    2499 83 +    198055 T
e Dicerorhinus_sumatrensis.PEKH010002091.1                  669424 83 +   1390856 T
e Desmodus_rotundus.KZ672289.1                             8627924 83 +  20541912 T
e Delphinapterus_leucas.KZ290073.1                        16811195 83 +  35494412 T
e Daubentonia_madagascariensis.ctg71                      12532896 70 -  12879189 T
e Dasypus_novemcinctus.JH564415.1                            61086 85 +   2246927 T
e Dasyprocta_punctata.DasPun_flattened_line_206793            1247 83 +      3576 T
e Cuniculus_paca.CunPac_flattened_line_231100                 2864 83 +      5455 T
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             24235 65 -     87169 T
e Crocidura_indochinensis.CroInd_scaffold_287352               379 52 +      4208 T
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          10509 80 -     20389 T
e Condylura_cristata.JH655891.1                           17545999 82 -  53390261 T
e Colobus_polykomos.k141_906115                              31777 104 +     84244 T
e Colobus_guereza.LG01                                   199944908 129 + 200372422 T
e Colobus_angolensis.KN981557.1                            1905238 77 +   2368649 T
e Choloepus_hoffmanni.KN194906.1                            170274 87 +    839153 T
e Choloepus_didactylus.ChoDid_scaffold_45914                 15175 87 +     19366 T
e Chlorocebus_sabaeus.CM001947.1                         135416709 77 + 135778131 T
e Chlorocebus_pygerythrus.k141_1025673                        9704 77 -     50209 T
e Chlorocebus_aethiops.ctg25                              18423261 77 -  18827391 T
e Chinchilla_lanigera.JH722012.1                           1248509 80 +   2543920 T
e Cheirogaleus_medius.k141_1055463                           12075 66 +     57038 T
e Cheirogaleus_major.k141_333249                             16726 66 -     52598 T
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            4816 68 -      6351 T
e Cercopithecus_roloway.k141_3180641                         39792 77 -     41420 T
e Cercopithecus_pogonias.k141_822820                          9298 77 +     17596 T
e Cercopithecus_petaurista.k141_807961                        9322 77 -     27947 T
e Cercopithecus_nictitans.k141_3278028                        1809 77 +      7159 T
e Cercopithecus_neglectus.k141_2526306                       34517 77 -     53127 T
e Cercopithecus_mona.ctg39                                21217397 77 -  21565898 T
e Cercopithecus_albogularis.ctg5                                38811706 77 +  39242232 T
e Cercopithecus_lowei.k141_457449                             9330 77 -     11289 T
e Cercopithecus_hamlyni.k141_187466                           9311 77 -     27936 T
e Cercopithecus_diana.k141_2427854                             976 77 +      9989 T
e Cercopithecus_cephus.k141_1078548                           6623 77 +     29689 T
e Cercopithecus_ascanius.k141_1024104                         3639 77 -     20310 T
e Cercocebus_torquatus.k141_3057011                           3493 77 +     27781 T
e Cercocebus_lunulatus.k141_3846941                           3263 77 +      8260 T
e Cercocebus_chrysogaster.k141_393940                         8844 77 -     19203 T
e Cercocebus_atys.KQ010504.1                               4470295 77 +   4669795 T
e Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2609 83 -      3715 T
e Cephalopachus_bancanus.k141_2037105                         4971 83 -      8605 T
e Cavia_tschudii.CavTsc_scaffold_8919                        98614 82 +    143979 T
e Cavia_porcellus.DS562891.1                              18359739 82 -  23407841 T
e Cavia_aperea.AVPZ01000300.1                             18347479 82 -  23392119 T
e Catagonus_wagneri.CatWag_scaffold_2839                     89266 124 +    217609 T
e Castor_canadensis.CasCan_scaffold_2074                    133658 80 +    179628 T
e Carollia_perspicillata.CarPer_scaffold_92756                2893 83 -     11696 T
e Carlito_syrichta.NW_007259797.1                           141055 83 -    496798 T
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18060012 83 -  44709034 T
e Capra_aegagrus.CM003241.1                               18829292 83 +  46296322 T
e Canis_lupus_orion.HG994398.1                            18496797 84 +  63665305 T
e Canis_lupus_familiaris.chr16                            17955496 84 -  59632846 T
e Canis_lupus_dingo.QKWQ01000480.1                         9031232 84 -   9314153 T
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    181845 84 -    185531 T
e CanFam4.chr16                                           17795788 84 -  60362399 T
e Camelus_ferus.KB017975.1                                  399658 83 -   1652518 T
e Camelus_dromedarius.KN272107.1                           2331382 83 -   7040546 T
e Camelus_bactrianus.KN276810.1                            9998918 83 -  17673402 T
e Bubalus_bubalis.KI419123.1                               2818467 83 +   4408762 T
e Bos_taurus.CM000203.6                                   18082978 83 +  45695690 T
e Bos_mutus.JH880303.1                                     1124900 83 -   1948126 T
e Bos_indicus.CM003047.1                                  20272340 83 +  48749331 T
e Bison_bison.KN261452.1                                    199135 83 -    288883 T
e Beatragus_hunteri.BeaHun_scaffold_50177                    26096 83 +     34529 T
e Balaenoptera_bonaerensis.DF707048.1                         2025 83 -     18090 T
e Balaenoptera_acutorostrata.KI537508.1                   15191559 83 +  23207421 T
e Avahi_peyrierasi.k141_1424874                              49933 67 +     85213 T
e Avahi_laniger.k141_765380                                  49308 67 -     92717 T
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  2475 83 +     43469 T
e Arctocebus_calabarensis.k141_288239                        14449 70 +     17124 T
e Aplodontia_rufa.AprRuf_scaffold_68852                       7278 78 +     20879 T
e Antilocapra_americana.AntAmePen_scaffold_12469             97626 83 -    100397 T
e Anoura_caudifer.AnoCau_scaffold_1412                      183123 83 +    412891 T
e Ammotragus_lervia.NIVO01071767.1                          675174 83 -   2318259 T
e Allochrocebus_solatus.k141_166128                            534 77 -     12518 T
e Allochrocebus_preussi.k141_310680                           9377 77 -      9772 T
e Allochrocebus_lhoesti.k141_4309873                          9251 77 -     28001 T
e Allenopithecus_nigroviridis.k141_3361533                    9324 77 -     52922 T
e Allactaga_bullata.AllBul_scaffold_9566                     65003 87 -     89534 T
e Ailurus_fulgens.LNAC01001112.1                             75224 84 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9507000 83 -  29979442 T
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           823290 65 -   1699592 T

a score=0.000000
s hg38.chrUn_KI270753v1                                        982 2 +     62944 CC
s Acinonyx_jubatus.LLWD01001279.1                           823225 2 -   1699592 CC
i Acinonyx_jubatus.LLWD01001279.1                        T 65 I 1
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506917 2 -  29979442 CC
i Ailuropoda_melanoleuca.LNAT01000098.1                  T 83 I 1
s Ailurus_fulgens.LNAC01001112.1                             75140 2 -    347723 CC
i Ailurus_fulgens.LNAC01001112.1                         T 84 I 1
s Allactaga_bullata.AllBul_scaffold_9566                     64916 2 -     89534 CA
i Allactaga_bullata.AllBul_scaffold_9566                 T 87 I 5
s Allenopithecus_nigroviridis.k141_3361533                    9247 2 -     52922 CC
i Allenopithecus_nigroviridis.k141_3361533               T 77 C 0
s Allochrocebus_lhoesti.k141_4309873                          9174 2 -     28001 CC
i Allochrocebus_lhoesti.k141_4309873                     T 77 C 0
s Allochrocebus_preussi.k141_310680                           9300 2 -      9772 CC
i Allochrocebus_preussi.k141_310680                      T 77 C 0
s Allochrocebus_solatus.k141_166128                            457 2 -     12518 CC
i Allochrocebus_solatus.k141_166128                      T 77 C 0
s Ammotragus_lervia.NIVO01071767.1                          675091 2 -   2318259 CA
i Ammotragus_lervia.NIVO01071767.1                       T 83 I 1
s Anoura_caudifer.AnoCau_scaffold_1412                      183040 2 +    412891 CC
i Anoura_caudifer.AnoCau_scaffold_1412                   T 83 I 1
s Antilocapra_americana.AntAmePen_scaffold_12469             97543 2 -    100397 CC
i Antilocapra_americana.AntAmePen_scaffold_12469         T 83 I 1
s Aplodontia_rufa.AprRuf_scaffold_68852                       7200 2 +     20879 CC
i Aplodontia_rufa.AprRuf_scaffold_68852                  T 78 I 1
s Arctocebus_calabarensis.k141_288239                        14379 2 +     17124 CA
i Arctocebus_calabarensis.k141_288239                    T 70 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2392 2 +     43469 CC
i Artibeus_jamaicensis.ArtJam_scaffold_25439             T 83 I 1
s Avahi_laniger.k141_765380                                  49241 2 -     92717 CT
i Avahi_laniger.k141_765380                              T 67 C 0
s Avahi_peyrierasi.k141_1424874                              49866 2 +     85213 CT
i Avahi_peyrierasi.k141_1424874                          T 67 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191476 2 +  23207421 CC
i Balaenoptera_acutorostrata.KI537508.1                  T 83 I 1
s Balaenoptera_bonaerensis.DF707048.1                         1942 2 -     18090 CC
i Balaenoptera_bonaerensis.DF707048.1                    T 83 I 1
s Beatragus_hunteri.BeaHun_scaffold_50177                    26013 2 +     34529 CA
i Beatragus_hunteri.BeaHun_scaffold_50177                T 83 I 1
s Bison_bison.KN261452.1                                    199052 2 -    288883 CA
i Bison_bison.KN261452.1                                 T 83 I 1
s Bos_indicus.CM003047.1                                  20272257 2 +  48749331 CA
i Bos_indicus.CM003047.1                                 T 83 I 1
s Bos_mutus.JH880303.1                                     1124817 2 -   1948126 CA
i Bos_mutus.JH880303.1                                   T 83 I 1
s Bos_taurus.CM000203.6                                   18082895 2 +  45695690 CA
i Bos_taurus.CM000203.6                                  T 83 I 1
s Bubalus_bubalis.KI419123.1                               2818384 2 +   4408762 CA
i Bubalus_bubalis.KI419123.1                             T 83 I 1
s Camelus_bactrianus.KN276810.1                            9998835 2 -  17673402 CC
i Camelus_bactrianus.KN276810.1                          T 83 I 1
s Camelus_dromedarius.KN272107.1                           2331299 2 -   7040546 CC
i Camelus_dromedarius.KN272107.1                         T 83 I 1
s Camelus_ferus.KB017975.1                                  399575 2 -   1652518 CC
i Camelus_ferus.KB017975.1                               T 83 I 1
s CanFam4.chr16                                           17795704 2 -  60362399 CC
i CanFam4.chr16                                          T 84 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181761 2 -    185531 CC
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 T 84 I 1
s Canis_lupus_dingo.QKWQ01000480.1                         9031148 2 -   9314153 CC
i Canis_lupus_dingo.QKWQ01000480.1                       T 84 I 1
s Canis_lupus_familiaris.chr16                            17955412 2 -  59632846 CC
i Canis_lupus_familiaris.chr16                           T 84 I 1
s Canis_lupus_orion.HG994398.1                            18496713 2 +  63665305 CC
i Canis_lupus_orion.HG994398.1                           T 84 I 1
s Capra_aegagrus.CM003241.1                               18829209 2 +  46296322 CA
i Capra_aegagrus.CM003241.1                              T 83 I 1
s Capra_hircus.CM004588.1                                 18059929 2 -  44709034 CA
i Capra_hircus.CM004588.1                                T 83 I 1
s Carlito_syrichta.NW_007259797.1                           140972 2 -    496798 CT
i Carlito_syrichta.NW_007259797.1                        T 83 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2810 2 -     11696 CC
i Carollia_perspicillata.CarPer_scaffold_92756           T 83 I 1
s Castor_canadensis.CasCan_scaffold_2074                    133578 2 +    179628 GC
i Castor_canadensis.CasCan_scaffold_2074                 T 80 I 1
s Catagonus_wagneri.CatWag_scaffold_2839                     89142 2 +    217609 CC
i Catagonus_wagneri.CatWag_scaffold_2839                 T 124 I 1
s Cavia_aperea.AVPZ01000300.1                             18347397 2 -  23392119 CC
i Cavia_aperea.AVPZ01000300.1                            T 82 I 1
s Cavia_porcellus.DS562891.1                              18359657 2 -  23407841 CC
i Cavia_porcellus.DS562891.1                             T 82 I 1
s Cavia_tschudii.CavTsc_scaffold_8919                        98532 2 +    143979 CT
i Cavia_tschudii.CavTsc_scaffold_8919                    T 82 I 1
s Cephalopachus_bancanus.k141_2037105                         4888 2 -      8605 CT
i Cephalopachus_bancanus.k141_2037105                    T 83 C 0
s Ceratotherium_simum.JH767749.1                          12227808 2 +  27778364 CC
i Ceratotherium_simum.JH767749.1                         T 83 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2526 2 -      3715 CC
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     T 83 I 1
s Cercocebus_atys.KQ010504.1                               4470218 2 +   4669795 CC
i Cercocebus_atys.KQ010504.1                             T 77 C 0
s Cercocebus_chrysogaster.k141_393940                         8767 2 -     19203 CC
i Cercocebus_chrysogaster.k141_393940                    T 77 C 0
s Cercocebus_lunulatus.k141_3846941                           3186 2 +      8260 CC
i Cercocebus_lunulatus.k141_3846941                      T 77 C 0
s Cercocebus_torquatus.k141_3057011                           3416 2 +     27781 CC
i Cercocebus_torquatus.k141_3057011                      T 77 C 0
s Cercopithecus_ascanius.k141_1024104                         3562 2 -     20310 CC
i Cercopithecus_ascanius.k141_1024104                    T 77 C 0
s Cercopithecus_cephus.k141_1078548                           6546 2 +     29689 CC
i Cercopithecus_cephus.k141_1078548                      T 77 C 0
s Cercopithecus_diana.k141_2427854                             899 2 +      9989 CC
i Cercopithecus_diana.k141_2427854                       T 77 C 0
s Cercopithecus_hamlyni.k141_187466                           9234 2 -     27936 CC
i Cercopithecus_hamlyni.k141_187466                      T 77 C 0
s Cercopithecus_lowei.k141_457449                             9253 2 -     11289 CC
i Cercopithecus_lowei.k141_457449                        T 77 C 0
s Cercopithecus_albogularis.ctg5                                38811629 2 +  39242232 CC
i Cercopithecus_albogularis.ctg5                               T 77 C 0
s Cercopithecus_mona.ctg39                                21217320 2 -  21565898 CC
i Cercopithecus_mona.ctg39                               T 77 C 0
s Cercopithecus_neglectus.k141_2526306                       34440 2 -     53127 CC
i Cercopithecus_neglectus.k141_2526306                   T 77 C 0
s Cercopithecus_nictitans.k141_3278028                        1732 2 +      7159 CC
i Cercopithecus_nictitans.k141_3278028                   T 77 C 0
s Cercopithecus_petaurista.k141_807961                        9245 2 -     27947 CC
i Cercopithecus_petaurista.k141_807961                   T 77 C 0
s Cercopithecus_pogonias.k141_822820                          9221 2 +     17596 CC
i Cercopithecus_pogonias.k141_822820                     T 77 C 0
s Cercopithecus_roloway.k141_3180641                         39715 2 -     41420 CC
i Cercopithecus_roloway.k141_3180641                     T 77 C 0
s Cheirogaleus_major.k141_333249                             16660 2 -     52598 CT
i Cheirogaleus_major.k141_333249                         T 66 C 0
s Cheirogaleus_medius.k141_1055463                           12009 2 +     57038 CT
i Cheirogaleus_medius.k141_1055463                       T 66 C 0
s Chinchilla_lanigera.JH722012.1                           1248429 2 +   2543920 CC
i Chinchilla_lanigera.JH722012.1                         T 80 I 1
s Chlorocebus_aethiops.ctg25                              18423184 2 -  18827391 CC
i Chlorocebus_aethiops.ctg25                             T 77 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9627 2 -     50209 CC
i Chlorocebus_pygerythrus.k141_1025673                   T 77 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416632 2 + 135778131 CC
i Chlorocebus_sabaeus.CM001947.1                         T 77 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15088 2 +     19366 CC
i Choloepus_didactylus.ChoDid_scaffold_45914             T 87 I 1
s Choloepus_hoffmanni.KN194906.1                            170187 2 +    839153 CC
i Choloepus_hoffmanni.KN194906.1                         T 87 I 1
s Colobus_angolensis.KN981557.1                            1905161 2 +   2368649 CC
i Colobus_angolensis.KN981557.1                          T 77 C 0
s Colobus_guereza.LG01                                   199944779 2 + 200372422 CC
i Colobus_guereza.LG01                                   T 129 C 0
s Colobus_polykomos.k141_906115                              31673 2 +     84244 CC
i Colobus_polykomos.k141_906115                          T 104 C 0
s Condylura_cristata.JH655891.1                           17545917 2 -  53390261 CA
i Condylura_cristata.JH655891.1                          T 82 I 1
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10429 2 -     20389 CC
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      T 80 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24170 2 -     87169 CC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         T 65 I 1
s Cuniculus_paca.CunPac_flattened_line_231100                 2781 2 +      5455 CC
i Cuniculus_paca.CunPac_flattened_line_231100            T 83 I 1
s Dasyprocta_punctata.DasPun_flattened_line_206793            1164 2 +      3576 CC
i Dasyprocta_punctata.DasPun_flattened_line_206793       T 83 I 1
s Dasypus_novemcinctus.JH564415.1                            61001 2 +   2246927 CC
i Dasypus_novemcinctus.JH564415.1                        T 85 I 1
s Daubentonia_madagascariensis.ctg71                      12532826 2 -  12879189 CT
i Daubentonia_madagascariensis.ctg71                     T 70 C 0
s Delphinapterus_leucas.KZ290073.1                        16811112 2 +  35494412 CA
i Delphinapterus_leucas.KZ290073.1                       T 83 I 1
s Desmodus_rotundus.KZ672289.1                             8627841 2 +  20541912 CC
i Desmodus_rotundus.KZ672289.1                           T 83 I 1
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669341 2 +   1390856 CC
i Dicerorhinus_sumatrensis.PEKH010002091.1               T 83 I 1
s Diceros_bicornis.DicBicMic_scaffold_5955                    2416 2 +    198055 CC
i Diceros_bicornis.DicBicMic_scaffold_5955               T 83 I 1
s Dipodomys_ordii.KN672350.1                              18895737 2 +  37912305 CC
i Dipodomys_ordii.KN672350.1                             T 83 I 1
s Dipodomys_stephensi.DipSte_scaffold_75855                  11947 2 +     14536 CC
i Dipodomys_stephensi.DipSte_scaffold_75855              T 83 I 1
s Dolichotis_patagonum.DolPat_scaffold_30833                 31421 2 -     42551 CC
i Dolichotis_patagonum.DolPat_scaffold_30833             T 83 I 1
s Eidolon_helvum.KE759718.1                                   7348 2 +     11740 CC
i Eidolon_helvum.KE759718.1                              T 82 I 1
s Elaphurus_davidianus.JRFZ01104969.1                       310213 2 +    607251 CC
i Elaphurus_davidianus.JRFZ01104969.1                    T 83 I 1
s Elephantulus_edwardii.JH947257.1                         1088936 2 +  10337057 CC
i Elephantulus_edwardii.JH947257.1                       T 82 I 1
s Enhydra_lutris.KZ291758.1                               16325702 2 -  41312741 CC
i Enhydra_lutris.KZ291758.1                              T 81 I 1
s Eptesicus_fuscus.JH977646.1                              2143998 2 -  14770903 CC
i Eptesicus_fuscus.JH977646.1                            T 83 I 1
s Equus_asinus.JREZ01000139.1                              1279683 2 +   4378816 CC
i Equus_asinus.JREZ01000139.1                            T 83 I 1
s Equus_caballus.CM000403.2                               18527504 2 -  39960074 CC
i Equus_caballus.CM000403.2                              T 83 I 1
s Equus_przewalskii.KK951119.1                               29519 2 +    498745 CC
i Equus_przewalskii.KK951119.1                           T 83 I 1
s Erythrocebus_patas.Contig38                             21199863 2 -  21539334 CC
i Erythrocebus_patas.Contig38                            T 77 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10788 2 +    133382 CC
i Eschrichtius_robustus.EscRob_flattened_line_8968       T 83 I 1
s Eubalaena_japonica.EubJap_flattened_line_31514             24725 2 -     44125 CC
i Eubalaena_japonica.EubJap_flattened_line_31514         T 83 I 1
s Felis_catus.AANG03299807.1                                   347 2 -       507 CC
i Felis_catus.AANG03299807.1                             T 65 I 1
s Felis_catus_fca126.CM031415.1                           20191925 2 + 205367284 CC
i Felis_catus_fca126.CM031415.1                          T 65 I 1
s Felis_nigripes.FelNig_flattened_line_20823                  5450 2 -     36744 CC
i Felis_nigripes.FelNig_flattened_line_20823             T 65 I 1
s Fukomys_damarensis.KN121974.1                             848431 2 +   3816255 CC
i Fukomys_damarensis.KN121974.1                          T 83 I 1
s Galeopterus_variegatus.GalVar_scaffold_56069               25395 2 +     26054 CC
i Galeopterus_variegatus.GalVar_scaffold_56069           T 83 I 1
s Glis_glis.GliGli_scaffold_19807                            30286 2 +     49224 CC
i Glis_glis.GliGli_scaffold_19807                        T 77 I 1
s Gorilla_beringei.k141_3596273                              10492 2 -     32273 CC
i Gorilla_beringei.k141_3596273                          I 185 T 140
s Gorilla_gorilla.LT578341.1                             186332642 2 + 186649187 CC
i Gorilla_gorilla.LT578341.1                             I 183 T 140
s Graphiurus_murinus.GraMur_scaffold_10447                   30015 1 +     78134 G-
i Graphiurus_murinus.GraMur_scaffold_10447               T 75 I 1
s Helogale_parvula.HelPar_flattened_line_2585               238087 2 +    327341 CC
i Helogale_parvula.HelPar_flattened_line_2585            T 65 I 1
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17413 2 +     36099 CA
i Hemitragus_hylocrius.HemHyl_scaffold_45859             T 83 I 1
s Heterocephalus_glaber.JH602082.1                        20659310 2 +  22651954 CC
i Heterocephalus_glaber.JH602082.1                       T 83 I 1
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 173 2 +       961 CC
i Heterohyrax_brucei.HetBruBak_scaffold_383740           T 82 I 1
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111968 2 +    128679 CC
i Hippopotamus_amphibius.HipAmp_scaffold_9076            T 83 I 1
s Hipposideros_armiger.JXIK01000431.1                       108307 2 +   1711038 CC
i Hipposideros_armiger.JXIK01000431.1                    T 82 I 1
s Hipposideros_galeritus.HipGal_scaffold_29171               39748 2 +     43066 CT
i Hipposideros_galeritus.HipGal_scaffold_29171           T 82 I 1
s Hoolock_leuconedys.ctg274                                    429191 2 +    630532 CC
i Hoolock_leuconedys.ctg274                                 T 206 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40552 2 +     55795 CC
i Hyaena_hyaena.HyaHya_flattened_line_26932              T 65 I 1
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19779 2 -    143317 CC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        T 83 I 1
s Hylobates_agilis.k141_307679                               12109 2 -     15490 CC
i Hylobates_agilis.k141_307679                           T 206 C 0
s Hylobates_klossii.k141_282416                              54114 2 +     67168 CC
i Hylobates_klossii.k141_282416                          T 206 C 0
s Hylobates_pileatus_b.LG02                                     189537767 2 - 191637585 CC
i Hylobates_pileatus_b.LG02                                     T 205 C 0
s Hylobates_pileatus_a.tarseq_633                            3330659 2 -  11177569 CC
i Hylobates_pileatus_a.tarseq_633                          T 206 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80853 2 +    135385 CC
i Hystrix_cristata.HysCri_scaffold_5660                  T 83 I 1
s Ictidomys_tridecemlineatus.JH393364.1                    7514520 2 -   7955117 CC
i Ictidomys_tridecemlineatus.JH393364.1                  T 78 I 1
s Indri_indri.k141_3655594                                   18098 2 +     31101 CT
i Indri_indri.k141_3655594                               T 70 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22329 2 +     23964 CA
i Inia_geoffrensis.IniGeo_flattened_line_48101           T 83 I 1
s Jaculus_jaculus.JH725527.1                               8271296 2 -   9596543 CA
i Jaculus_jaculus.JH725527.1                             T 87 I 5
s Kogia_breviceps.KogBre_flattened_line_192630                1596 2 -      3359 CC
i Kogia_breviceps.KogBre_flattened_line_192630           T 83 I 1
s Lasiurus_borealis.LasBor_scaffold_50988                    11863 2 +     29960 CC
i Lasiurus_borealis.LasBor_scaffold_50988                T 40 I 16
s Lepilemur_ankaranensis.k141_596936                          6732 2 -     23766 CT
i Lepilemur_ankaranensis.k141_596936                     T 70 C 0
s Lepilemur_dorsalis.k141_577674                             24679 2 +     45836 CT
i Lepilemur_dorsalis.k141_577674                         T 70 C 0
s Lepilemur_ruficaudatus.k141_420445                         31590 2 -     32627 AT
i Lepilemur_ruficaudatus.k141_420445                     T 70 C 0
s Lepilemur_septentrionalis.k141_185316                      22734 2 +     54090 CT
i Lepilemur_septentrionalis.k141_185316                  T 70 C 0
s Leptonychotes_weddellii.KB714746.1                       3036035 2 +   3914936 CC
i Leptonychotes_weddellii.KB714746.1                     T 84 I 1
s Lipotes_vexillifer.KE559953.1                             267410 2 -    662738 CA
i Lipotes_vexillifer.KE559953.1                          T 80 I 1
s Lophocebus_aterrimus.ctg367                              1431388 2 +   1826925 CC
i Lophocebus_aterrimus.ctg367                            T 78 C 0
s Loris_lydekkerianus.k141_2539221                             631 2 +     11245 CC
i Loris_lydekkerianus.k141_2539221                       T 65 C 0
s Loris_tardigradus.ctg83                                   999466 2 +   6120653 CC
i Loris_tardigradus.ctg83                                T 66 C 0
s Loxodonta_africana.GL010049.1                            4214446 2 -  43346337 TC
i Loxodonta_africana.GL010049.1                          T 82 I 1
s Lycaon_pictus.CM007581.1                                17951652 2 -  59628241 CC
i Lycaon_pictus.CM007581.1                               T 84 I 1
s Macaca_arctoides.k141_2326796                               1573 2 +     40492 CC
i Macaca_arctoides.k141_2326796                          T 77 C 0
s Macaca_assamensis.Contig5                               59670833 2 +  60120075 CC
i Macaca_assamensis.Contig5                              T 77 C 0
s Macaca_cyclopis.k119_18836                                  7331 2 -     26193 CC
i Macaca_cyclopis.k119_18836                             T 77 C 0
s Macaca_fascicularis.k141_814140                            75125 2 -    114318 CC
i Macaca_fascicularis.k141_814140                        T 77 C 0
s Macaca_fuscata.k119_255327                                   844 2 -     23192 CC
i Macaca_fuscata.k119_255327                             T 77 C 0
s Macaca_leonina.k141_3550399                                10297 2 -     29190 CC
i Macaca_leonina.k141_3550399                            T 77 C 0
s Macaca_maura.k141_2733130                                  18864 2 +     37952 CC
i Macaca_maura.k141_2733130                              T 77 C 0
s Macaca_mulatta.NC_041758.1                             186833952 2 + 187317192 CC
i Macaca_mulatta.NC_041758.1                             T 77 C 0
s Macaca_nemestrina.KQ007038.1                            25452513 2 -  25927173 CC
i Macaca_nemestrina.KQ007038.1                           T 77 C 0
s Macaca_nigra.k141_1655396                                  74713 2 +     89720 CC
i Macaca_nigra.k141_1655396                              T 77 C 0
s Macaca_radiata.k141_3680011                                 1710 2 +     20474 CC
i Macaca_radiata.k141_3680011                            T 77 C 0
s Macaca_siberu.k141_635500                                   1511 2 -     14993 CC
i Macaca_siberu.k141_635500                              T 77 C 0
s Macaca_silenus.Contig273                                  324384 2 -    668171 CC
i Macaca_silenus.Contig273                               T 77 C 0
s Macaca_thibetana.k99_7456                                  15653 2 -     15935 CC
i Macaca_thibetana.k99_7456                              T 77 C 0
s Macaca_tonkeana.k141_1498238                               20450 2 -     45290 CC
i Macaca_tonkeana.k141_1498238                           T 77 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87495 2 +     94391 CC
i Macroglossus_sobrinus.MacSob_scaffold_8222             T 81 I 1
s Mandrillus_leucophaeus.scaffold280                      23932005 2 -  24302211 CC
i Mandrillus_leucophaeus.scaffold280                     T 77 C 0
s Mandrillus_sphinx.Contig270                               346183 2 +    752769 CC
i Mandrillus_sphinx.Contig270                            T 77 C 0
s Manis_javanica.JSZB01003497.1                              15540 2 +    737560 CC
i Manis_javanica.JSZB01003497.1                          T 81 I 1
s Manis_pentadactyla.KN006162.1                              46929 2 -    317179 CC
i Manis_pentadactyla.KN006162.1                          T 81 I 1
s Marmota_marmota.CZRN01000018.1                          33097370 2 -  40650429 CC
i Marmota_marmota.CZRN01000018.1                         T 78 I 1
s Megaderma_lyra.MegLyr_scaffold_4542                         6727 2 -    207569 CC
i Megaderma_lyra.MegLyr_scaffold_4542                    T 64 I 1
s Mellivora_capensis.MelCap_flattened_line_69365              6166 2 +     13704 CC
i Mellivora_capensis.MelCap_flattened_line_69365         T 84 I 1
s Mesoplodon_bidens.MesBid_scaffold_108144                    2997 2 +     10310 CC
i Mesoplodon_bidens.MesBid_scaffold_108144               T 83 I 1
s Microcebus_murinus.CM007674.1                           18283258 2 -  93316391 CT
i Microcebus_murinus.CM007674.1                          T 70 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13352 2 -     19307 CC
i Micronycteris_hirsuta.MicHir_scaffold_52381            T 83 I 1
s Miniopterus_natalensis.LDJU01000034.1                    1849026 2 +   8254450 CC
i Miniopterus_natalensis.LDJU01000034.1                  T 83 I 1
s Miniopterus_schreibersii.MinSch_scaffold_18080             32902 2 +     64694 CC
i Miniopterus_schreibersii.MinSch_scaffold_18080         T 83 I 1
s Miopithecus_ogouensis.k141_534055                           3740 2 -     28506 CC
i Miopithecus_ogouensis.k141_534055                      T 77 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62365 2 -     63350 CC
i Mirounga_angustirostris.MirAng_flattened_line_22144    T 84 I 1
s Mirza_zaza.k141_952172                                      4613 2 -     37649 CT
i Mirza_zaza.k141_952172                                 T 69 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26502 2 -    437263 CA
i Monodon_monoceros.MonMon_M_scaffold_103                T 83 I 1
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137758 2 -    366855 CC
i Mormoops_blainvillei.MorMeg_scaffold_1417              T 83 I 1
s Moschus_moschiferus.MosMos_scaffold_61429                  27353 2 -     27816 CA
i Moschus_moschiferus.MosMos_scaffold_61429              T 81 I 1
s Mungos_mungo.MunMun_flattened_line_23663                   31288 2 +     37127 CC
i Mungos_mungo.MunMun_flattened_line_23663               T 65 I 1
s Muscardinus_avellanarius.MusAve_scaffold_82313              2279 2 +     14296 CC
i Muscardinus_avellanarius.MusAve_scaffold_82313         T 77 I 1
s Mustela_putorius.JH418006.1                               297597 2 -  14710649 CC
i Mustela_putorius.JH418006.1                            T 84 I 1
s Myotis_brandtii.KE162005.1                                278233 2 -  10118263 CC
i Myotis_brandtii.KE162005.1                             T 72 I 1
s Myotis_davidii.KB100139.1                                1585790 2 -   6019432 CC
i Myotis_davidii.KB100139.1                              T 72 I 1
s Myotis_lucifugus.GL429869.1                              3901999 2 -   4330536 CC
i Myotis_lucifugus.GL429869.1                            T 72 I 1
s Myotis_myotis.MyoMyo_scaffold_28916                        32558 2 +     33610 CC
i Myotis_myotis.MyoMyo_scaffold_28916                    T 72 I 1
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186039 2 +    196477 TC
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           T 87 I 1
s Nasalis_larvatus.k141_413338                                9753 2 +     21681 CC
i Nasalis_larvatus.k141_413338                           T 77 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865458 2 +   7148211 CA
i Neophocaena_asiaeorientalis.KZ687982.1                 T 83 I 1
s Noctilio_leporinus.NocLep_scaffold_251                    756323 2 +    783361 CC
i Noctilio_leporinus.NocLep_scaffold_251                 T 82 I 1
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145913 2 -   9404916 CC
i Nyctereutes_procyonoides.CAJHUB010000658.1             T 84 I 1
s Nycticebus_bengalensis.LG01                            102574435 2 - 196305487 CC
i Nycticebus_bengalensis.LG01                            T 65 C 0
s Nycticebus_coucang.k141_5327727                             2121 2 +      8486 CC
i Nycticebus_coucang.k141_5327727                        T 65 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744862 2 + 199412804 CC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       T 65 C 0
s Ochotona_princeps.JH802162.1                             1355694 2 +   3988456 TA
i Ochotona_princeps.JH802162.1                           T 71 I 1
s Odobenus_rosmarus.KB229312.1                              500654 2 -   2017862 CC
i Odobenus_rosmarus.KB229312.1                           T 84 I 1
s Odocoileus_virginianus.KZ100018.1                         144586 2 +    630418 CC
i Odocoileus_virginianus.KZ100018.1                      T 82 I 1
s Orcinus_orca.KB316932.1                                  2781373 2 -  10937097 CA
i Orcinus_orca.KB316932.1                                T 83 I 1
s Orycteropus_afer.OryAfe_flattened_line_144387               6771 2 -     18566 CC
i Orycteropus_afer.OryAfe_flattened_line_144387          T 82 I 1
s Otocyon_megalotis.JAEUCK010005147.1                       458667 2 -    559221 CC
i Otocyon_megalotis.JAEUCK010005147.1                    T 84 I 1
s Ovis_aries.CM001607.2                                   17584944 2 +  44047080 CA
i Ovis_aries.CM001607.2                                  T 83 I 1
s Ovis_canadensis.OviCan_scaffold_2572                      173365 2 -    191736 CA
i Ovis_canadensis.OviCan_scaffold_2572                   T 83 I 1
s Pan_paniscus.KQ411613.1                                    36136 2 +     80009 CC
i Pan_paniscus.KQ411613.1                                T 2338 I 2405
s Pan_troglodytes.CM009242.2                             189137088 2 + 189151597 CC
i Pan_troglodytes.CM009242.2                             T 417 I 208
s Panthera_onca.PanOnc_flattened_line_3271                  147072 2 +    230217 CC
i Panthera_onca.PanOnc_flattened_line_3271               T 65 I 1
s Panthera_pardus.KV860321.1                                259781 2 +  18783137 CC
i Panthera_pardus.KV860321.1                             T 65 I 1
s Panthera_tigris.KE722367.1                               4716928 2 -   8748460 CC
i Panthera_tigris.KE722367.1                             T 65 I 1
s Pantholops_hodgsonii.KE114653.1                          1264298 2 -   2937107 CA
i Pantholops_hodgsonii.KE114653.1                        T 83 I 1
s Papio_anubis.CM001495.2                                183437327 2 + 183742232 CC
i Papio_anubis.CM001495.2                                T 77 C 0
s Papio_cynocephalus.k141_4307930                             1392 2 +     20448 CC
i Papio_cynocephalus.k141_4307930                        T 170 C 0
s Papio_hamadryas.Contig39                                20558011 2 +  20919399 CC
i Papio_hamadryas.Contig39                               T 77 C 0
s Papio_kindae.k141_1936966                                    135 2 +     41871 CC
i Papio_kindae.k141_1936966                              T 170 C 0
s Papio_ursinus.k141_3428135                                  3413 2 +      9205 CC
i Papio_ursinus.k141_3428135                             T 77 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8807 2 -     78924 TC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 T 65 I 1
s Perodicticus_ibeanus.k141_855320                            4612 2 +     13100 CC
i Perodicticus_ibeanus.k141_855320                       T 70 C 0
s Perodicticus_potto.k141_1092580                             2980 2 +     25941 CC
i Perodicticus_potto.k141_1092580                        T 70 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25294 2 +     32600 CC
i Perognathus_longimembris.PerPac_flattened_line_34437   T 22 I 1
s Petromus_typicus.PetTyp_scaffold_42190                     25779 2 -     29689 CC
i Petromus_typicus.PetTyp_scaffold_42190                 T 81 I 1
s Phocoena_phocoena.PhoPho_flattened_line_24159               8420 2 +     63832 CA
i Phocoena_phocoena.PhoPho_flattened_line_24159          T 83 I 1
s Piliocolobus_badius.k141_1234363                           38269 2 +     62158 CC
i Piliocolobus_badius.k141_1234363                       T 77 C 0
s Piliocolobus_gordonorum.k141_381342                        32996 2 +     89929 CC
i Piliocolobus_gordonorum.k141_381342                    T 77 C 0
s Piliocolobus_kirkii.k141_448987                            34412 2 +     51399 CC
i Piliocolobus_kirkii.k141_448987                        T 77 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290633 2 -  14605196 CC
i Piliocolobus_tephrosceles.PDMG02000141.1               T 77 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              372 2 +     22620 CC
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        T 83 I 1
s Platanista_gangetica.PlaMin_flattened_line_32310           34126 2 +     35617 TC
i Platanista_gangetica.PlaMin_flattened_line_32310       T 83 I 1
s Pongo_abelii.CM009266.2                                189125174 2 + 189387572 CC
i Pongo_abelii.CM009266.2                                T 513 I 309
s Pongo_pygmaeus.ctg66                                     9565017 2 +   9816681 CC
i Pongo_pygmaeus.ctg66                                   T 274 I 70
s Presbytis_comata.k141_677006                               67913 2 -     81375 CC
i Presbytis_comata.k141_677006                           T 77 C 0
s Presbytis_mitrata.k141_2342859                              9740 2 +     10147 CC
i Presbytis_mitrata.k141_2342859                         T 77 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9934 2 -     22811 CC
i Procavia_capensis.ProCapCap_scaffold_85530             T 82 I 1
s Propithecus_coquerelli.NW_012148875.1                     986312 2 +   2598838 CT
i Propithecus_coquerelli.NW_012148875.1                  T 67 C 0
s Propithecus_coronatus.k141_347390                          24601 2 +     38485 CT
i Propithecus_coronatus.k141_347390                      T 67 C 0
s Propithecus_diadema.k141_357118                              762 2 +      4256 CT
i Propithecus_diadema.k141_357118                        T 67 C 0
s Propithecus_edwardsi.k141_1176054                          22120 2 +     35766 CT
i Propithecus_edwardsi.k141_1176054                      T 67 C 0
s Propithecus_perrieri.k141_1200571                            303 2 -     24134 CT
i Propithecus_perrieri.k141_1200571                      T 67 C 0
s Propithecus_tattersalli.k141_790011                        24115 2 -     67325 CT
i Propithecus_tattersalli.k141_790011                    T 67 C 0
s Propithecus_verreauxi.k141_956661                            360 2 -      6182 CT
i Propithecus_verreauxi.k141_956661                      T 67 C 0
s Pteronotus_parnellii.KE909381.1                            11140 2 -     21811 CT
i Pteronotus_parnellii.KE909381.1                        T 88 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36608 2 +     42204 CC
i Pteronura_brasiliensis.PteBra_flattened_line_31117     T 84 I 1
s Pteropus_alecto.KB030862.1                              22973618 2 +  28871421 CC
i Pteropus_alecto.KB030862.1                             T 81 I 1
s Pteropus_vampyrus.KN534172.1                                1555 2 -      8028 CC
i Pteropus_vampyrus.KN534172.1                           T 81 I 1
s Puma_concolor.QAVW01001104.1                            20270239 2 -  38429054 CC
i Puma_concolor.QAVW01001104.1                           T 65 I 1
s Pygathrix_cinerea.k141_1153803                              9742 2 -     91421 CC
i Pygathrix_cinerea.k141_1153803                         T 77 C 0
s Pygathrix_nigripes_b.ctg100                                 7603876 2 +   7812017 CC
i Pygathrix_nigripes_b.ctg100                               T 77 C 0
s Pygathrix_nigripes_a.k141_215492                              9715 2 -     72585 CC
i Pygathrix_nigripes_a.k141_215492                         T 77 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4834 2 +     55207 CC
i Rangifer_tarandus.RanTarSib_scaffold_29737             T 82 I 1
s Rhinolophus_sinicus.LVEH01000134.1                        366851 2 -   3329780 CC
i Rhinolophus_sinicus.LVEH01000134.1                     T 83 I 1
s Rhinopithecus_bieti.k119_217274                             1128 2 -     11128 CC
i Rhinopithecus_bieti.k119_217274                        T 377 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230505 2 - 195417433 CC
i Rhinopithecus_roxellana.NC_044550.1                    T 357 C 0
s Rhinopithecus_strykeri.ctg102                            7666213 2 +   7961872 CC
i Rhinopithecus_strykeri.ctg102                          T 297 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84603 2 -     96226 CC
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            T 82 I 1
s Saiga_tatarica.SaiTat_scaffold_373180                       3487 2 +      4321 CA
i Saiga_tatarica.SaiTat_scaffold_373180                  T 82 I 1
s Semnopithecus_entellus.k141_11662                          14257 2 -     19888 CC
i Semnopithecus_entellus.k141_11662                      T 77 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21462 2 +     39453 CC
i Semnopithecus_hypoleucos.k141_1615806                  T 77 C 0
s Semnopithecus_johnii.k141_670120                            1986 2 +     27826 CC
i Semnopithecus_johnii.k141_670120                       T 77 C 0
s Semnopithecus_priam.k141_638794                             1508 2 -     19483 CC
i Semnopithecus_priam.k141_638794                        T 77 C 0
s Semnopithecus_schistaceus.k141_1584426                      1570 2 +      7198 CC
i Semnopithecus_schistaceus.k141_1584426                 T 77 C 0
s Semnopithecus_vetulus.k141_1200928                          9830 2 +     15514 CC
i Semnopithecus_vetulus.k141_1200928                     T 77 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187623 2 -    191337 TG
i Solenodon_paradoxus.SolPar_flattened_line_5840         T 83 I 1
s Spermophilus_dauricus.KZ294078.1                         1948162 2 -   3870691 CC
i Spermophilus_dauricus.KZ294078.1                       T 78 I 1
s Spilogale_gracilis.SpiGra_flattened_line_13525             27151 2 +     97271 CC
i Spilogale_gracilis.SpiGra_flattened_line_13525         T 83 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14157 2 -    196729 CC
i Suricata_suricatta.SurSur_flattened_line_6629          T 65 I 1
s Sus_scrofa.CM000828.4                                   62882405 2 -  69701581 CC
i Sus_scrofa.CM000828.4                                  T 70 I 1
s Symphalangus_syndactylus.tarseq_199                      1087806 2 -   1523678 CC
i Symphalangus_syndactylus.tarseq_199                    T 207 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6756 2 +     41958 CC
i Tadarida_brasiliensis.TadBra_scaffold_25820            T 82 I 1
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69401 2 +    116680 TC
i Tamandua_tetradactyla.TamTet_scaffold_1782             T 87 I 1
s Tapirus_indicus.TapInd_scaffold_9301                      115138 2 -    156842 CC
i Tapirus_indicus.TapInd_scaffold_9301                   T 83 I 1
s Tapirus_terrestris.TapTer_scaffold_755                    383593 2 +    539355 CC
i Tapirus_terrestris.TapTer_scaffold_755                 T 83 I 1
s Tarsius_lariang.k141_2201908                               10587 2 +     70052 CT
i Tarsius_lariang.k141_2201908                           T 83 C 0
s Tarsius_wallacei.k141_780063                               14892 2 +     25099 CT
i Tarsius_wallacei.k141_780063                           T 83 C 0
s Theropithecus_gelada.CM009954.1                        186422836 2 + 186847797 CC
i Theropithecus_gelada.CM009954.1                        T 77 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103120 2 +    114563 TC
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           T 82 I 1
s Tonatia_saurophila.TonSau_scaffold_294                     78896 2 +    610378 CC
i Tonatia_saurophila.TonSau_scaffold_294                 T 83 I 1
s Trachypithecus_auratus.k141_722599                          5567 2 -     20410 CC
i Trachypithecus_auratus.k141_722599                     T 74 C 0
s Trachypithecus_crepusculus.k141_1194022                     9759 2 +     15221 CC
i Trachypithecus_crepusculus.k141_1194022                T 77 C 0
s Trachypithecus_cristatus.k141_580354                        5667 2 +     19930 CC
i Trachypithecus_cristatus.k141_580354                   T 74 C 0
s Trachypithecus_francoisi.k141_1412647                       2094 2 -     19997 CC
i Trachypithecus_francoisi.k141_1412647                  T 77 C 0
s Trachypithecus_geei.k141_277701                            42213 2 -     60166 CC
i Trachypithecus_geei.k141_277701                        T 77 C 0
s Trachypithecus_germaini.k141_912491                         9685 2 -     27529 CC
i Trachypithecus_germaini.k141_912491                    T 77 C 0
s Trachypithecus_hatinhensis.k141_143409                      9625 2 -     18194 CC
i Trachypithecus_hatinhensis.k141_143409                 T 77 C 0
s Trachypithecus_laotum.k141_907409                           3361 2 -     21137 CC
i Trachypithecus_laotum.k141_907409                      T 77 C 0
s Trachypithecus_leucocephalus.k141_587342                    2063 2 -     10723 CC
i Trachypithecus_leucocephalus.k141_587342               T 77 C 0
s Trachypithecus_melamera.k141_434728                         1216 2 +      9834 CC
i Trachypithecus_melamera.k141_434728                    T 77 C 0
s Trachypithecus_obscurus.k141_190785                        19534 2 +     32220 CC
i Trachypithecus_obscurus.k141_190785                    T 77 C 0
s Trachypithecus_phayrei.ctg124                            5933631 2 +   6242583 CC
i Trachypithecus_phayrei.ctg124                          T 77 C 0
s Trachypithecus_pileatus.k141_2007326                        2876 2 +     20839 CC
i Trachypithecus_pileatus.k141_2007326                   T 77 C 0
s Tragulus_javanicus.TraJav_scaffold_124071                    833 2 -      2171 CA
i Tragulus_javanicus.TraJav_scaffold_124071              T 2 T 2
s Tupaia_chinensis.KB320699.1                              2149523 2 +   4065304 TC
i Tupaia_chinensis.KB320699.1                            T 109 I 1
s Tupaia_tana.TupTan_flattened_line_97126                     3142 2 -     10553 TC
i Tupaia_tana.TupTan_flattened_line_97126                T 81 I 1
s Tursiops_truncatus.MRVK01000835.1                       15737620 2 +  33153633 CA
i Tursiops_truncatus.MRVK01000835.1                      T 83 I 1
s Uropsilus_gracilis.UroGra_scaffold_97021                    1851 2 -      4736 CC
i Uropsilus_gracilis.UroGra_scaffold_97021               T 83 I 1
s Ursus_maritimus.KK499267.1                               4846851 2 -   5085361 CC
i Ursus_maritimus.KK499267.1                             T 84 I 1
s Vicugna_pacos.KN270157.1                                 5368324 2 -   5488506 CC
i Vicugna_pacos.KN270157.1                               T 83 I 1
s Vulpes_lagopus.VulLag_flattened_line_30954                  7328 2 -     43706 CC
i Vulpes_lagopus.VulLag_flattened_line_30954             T 84 I 1
s Xerus_inauris.XerIna_scaffold_48378                        19657 2 -     24430 CC
i Xerus_inauris.XerIna_scaffold_48378                    T 78 I 1
s Zalophus_californianus.ZalCal_flattened_line_63728          1776 2 +      2932 CC
i Zalophus_californianus.ZalCal_flattened_line_63728     T 84 I 1
s Zapus_hudsonius.ZapHud_scaffold_11398                       9930 2 +     63895 CA
i Zapus_hudsonius.ZapHud_scaffold_11398                  T 86 I 5
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11312 2 +     12536 CC
i Ziphius_cavirostris.ZipCav_flattened_line_71469        T 83 I 1
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Varecia_variegata.k141_1128296                              7155 0 +     24756 C
e Varecia_rubra.k141_590885                                   7107 0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   1874 68 +      8208 T
e Sorex_araneus.JH798187.1                                13647036 64 -  18376816 T
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    151381 45 -    313613 T
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414 0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Papio_papio.k141_802527                                     3591 59 +     27711 T
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.KL204047.1                            2025524 76 -   3037898 T
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5135 74 +     14753 T
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    15418 9 -    145209 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Lemur_catta.scaffold_24                                 15519761 0 -  30322482 C
e Hapalemur_occidentalis.k141_907772                          9234 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402 0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298 0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517 0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galagoides_demidoff.k141_31856                              3212 81 -      3432 T
e Eulemur_sanfordi.k141_1122526                               9432 0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267 0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247 0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321 0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369 0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369 0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184 0 -     25546 C
e Eulemur_collaris.k141_377015                                2154 0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453 0 -     14127 C
e Erinaceus_europaeus.JH835339.1                           3325355 79 -   7059049 T
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Dinomys_branickii.DinBra_scaffold_21862                    34287 77 +     67921 T
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Crocidura_indochinensis.CroInd_scaffold_287352               379 52 +      4208 T
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            4816 68 -      6351 T
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                        984 2 +     62944 TG
s Acinonyx_jubatus.LLWD01001279.1                           823228 2 -   1699592 AC
i Acinonyx_jubatus.LLWD01001279.1                        I 1 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506920 2 -  29979442 AC
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 1 I 3
s Ailurus_fulgens.LNAC01001112.1                             75143 2 -    347723 AC
i Ailurus_fulgens.LNAC01001112.1                         I 1 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64923 2 -     89534 AG
i Allactaga_bullata.AllBul_scaffold_9566                 I 5 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9249 2 -     52922 TG
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9176 2 -     28001 TG
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9302 2 -      9772 TG
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            459 2 -     12518 TG
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675094 2 -   2318259 AG
i Ammotragus_lervia.NIVO01071767.1                       I 1 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183043 2 +    412891 AC
i Anoura_caudifer.AnoCau_scaffold_1412                   I 1 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97546 2 -    100397 AG
i Antilocapra_americana.AntAmePen_scaffold_12469         I 1 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7203 2 +     20879 GG
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 1 C 0
s Arctocebus_calabarensis.k141_288239                        14381 2 +     17124 AA
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2395 2 +     43469 AG
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 1 C 0
s Avahi_laniger.k141_765380                                  49243 2 -     92717 GG
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              49868 2 +     85213 GG
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191479 2 +  23207421 AG
i Balaenoptera_acutorostrata.KI537508.1                  I 1 C 0
s Balaenoptera_bonaerensis.DF707048.1                         1945 2 -     18090 AG
i Balaenoptera_bonaerensis.DF707048.1                    I 1 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26016 2 +     34529 GG
i Beatragus_hunteri.BeaHun_scaffold_50177                I 1 C 0
s Bison_bison.KN261452.1                                    199055 2 -    288883 AG
i Bison_bison.KN261452.1                                 I 1 C 0
s Bos_indicus.CM003047.1                                  20272260 2 +  48749331 AG
i Bos_indicus.CM003047.1                                 I 1 C 0
s Bos_mutus.JH880303.1                                     1124820 2 -   1948126 AG
i Bos_mutus.JH880303.1                                   I 1 C 0
s Bos_taurus.CM000203.6                                   18082898 2 +  45695690 AG
i Bos_taurus.CM000203.6                                  I 1 C 0
s Bubalus_bubalis.KI419123.1                               2818387 2 +   4408762 AG
i Bubalus_bubalis.KI419123.1                             I 1 C 0
s Camelus_bactrianus.KN276810.1                            9998838 2 -  17673402 AG
i Camelus_bactrianus.KN276810.1                          I 1 C 0
s Camelus_dromedarius.KN272107.1                           2331302 2 -   7040546 AG
i Camelus_dromedarius.KN272107.1                         I 1 C 0
s Camelus_ferus.KB017975.1                                  399578 2 -   1652518 AG
i Camelus_ferus.KB017975.1                               I 1 C 0
s CanFam4.chr16                                           17795707 2 -  60362399 GC
i CanFam4.chr16                                          I 1 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181764 2 -    185531 GC
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 1 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031151 2 -   9314153 GC
i Canis_lupus_dingo.QKWQ01000480.1                       I 1 C 0
s Canis_lupus_familiaris.chr16                            17955415 2 -  59632846 GC
i Canis_lupus_familiaris.chr16                           I 1 C 0
s Canis_lupus_orion.HG994398.1                            18496716 2 +  63665305 GC
i Canis_lupus_orion.HG994398.1                           I 1 C 0
s Capra_aegagrus.CM003241.1                               18829212 2 +  46296322 AG
i Capra_aegagrus.CM003241.1                              I 1 C 0
s Capra_hircus.CM004588.1                                 18059932 2 -  44709034 AG
i Capra_hircus.CM004588.1                                I 1 C 0
s Carlito_syrichta.NW_007259797.1                           140974 2 -    496798 GG
i Carlito_syrichta.NW_007259797.1                        C 0 I 1
s Carollia_perspicillata.CarPer_scaffold_92756                2813 2 -     11696 AG
i Carollia_perspicillata.CarPer_scaffold_92756           I 1 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133581 2 +    179628 GG
i Castor_canadensis.CasCan_scaffold_2074                 I 1 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89145 2 +    217609 AG
i Catagonus_wagneri.CatWag_scaffold_2839                 I 1 C 0
s Cavia_aperea.AVPZ01000300.1                             18347400 2 -  23392119 GG
i Cavia_aperea.AVPZ01000300.1                            I 1 C 0
s Cavia_porcellus.DS562891.1                              18359660 2 -  23407841 GG
i Cavia_porcellus.DS562891.1                             I 1 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98535 2 +    143979 GG
i Cavia_tschudii.CavTsc_scaffold_8919                    I 1 C 0
s Cephalopachus_bancanus.k141_2037105                         4890 2 -      8605 GG
i Cephalopachus_bancanus.k141_2037105                    C 0 I 1
s Ceratotherium_simum.JH767749.1                          12227811 2 +  27778364 AG
i Ceratotherium_simum.JH767749.1                         I 1 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2529 2 -      3715 AG
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     I 1 C 0
s Cercocebus_atys.KQ010504.1                               4470220 2 +   4669795 TG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8769 2 -     19203 TG
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3188 2 +      8260 TG
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3418 2 +     27781 TG
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3564 2 -     20310 TG
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6548 2 +     29689 TG
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             901 2 +      9989 CG
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9236 2 -     27936 TG
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9255 2 -     11289 TG
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811631 2 +  39242232 TG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217322 2 -  21565898 TG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34442 2 -     53127 TG
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1734 2 +      7159 TG
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9247 2 -     27947 TG
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9223 2 +     17596 TG
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39717 2 -     41420 TG
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Cheirogaleus_major.k141_333249                             16662 2 -     52598 GG
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12011 2 +     57038 GG
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1248432 2 +   2543920 GG
i Chinchilla_lanigera.JH722012.1                         I 1 C 0
s Chlorocebus_aethiops.ctg25                              18423186 2 -  18827391 TG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9629 2 -     50209 TG
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416634 2 + 135778131 TG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15091 2 +     19366 GA
i Choloepus_didactylus.ChoDid_scaffold_45914             I 1 C 0
s Choloepus_hoffmanni.KN194906.1                            170190 2 +    839153 GA
i Choloepus_hoffmanni.KN194906.1                         I 1 C 0
s Colobus_angolensis.KN981557.1                            1905163 2 +   2368649 TG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944781 2 + 200372422 TG
i Colobus_guereza.LG01                                   C 0 I 27
s Colobus_polykomos.k141_906115                              31675 2 +     84244 TG
i Colobus_polykomos.k141_906115                          C 0 I 27
s Condylura_cristata.JH655891.1                           17545920 2 -  53390261 AG
i Condylura_cristata.JH655891.1                          I 1 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10432 2 -     20389 AA
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 1 C 0
s Crocidura_indochinensis.CroInd_scaffold_603213              1025 2 +      1923 TG
i Crocidura_indochinensis.CroInd_scaffold_603213         T 7 T 2
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24173 2 -     87169 AC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 1 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2784 2 +      5455 GC
i Cuniculus_paca.CunPac_flattened_line_231100            I 1 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1167 2 +      3576 GG
i Dasyprocta_punctata.DasPun_flattened_line_206793       I 1 C 0
s Dasypus_novemcinctus.JH564415.1                            61004 2 +   2246927 GA
i Dasypus_novemcinctus.JH564415.1                        I 1 C 0
s Daubentonia_madagascariensis.ctg71                      12532828 2 -  12879189 GG
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811115 2 +  35494412 AG
i Delphinapterus_leucas.KZ290073.1                       I 1 C 0
s Desmodus_rotundus.KZ672289.1                             8627844 2 +  20541912 AG
i Desmodus_rotundus.KZ672289.1                           I 1 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669344 2 +   1390856 AG
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 1 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2419 2 +    198055 AG
i Diceros_bicornis.DicBicMic_scaffold_5955               I 1 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34210 2 +     67921 GG
i Dinomys_branickii.DinBra_scaffold_21862                T 77 C 0
s Dipodomys_ordii.KN672350.1                              18895740 2 +  37912305 GG
i Dipodomys_ordii.KN672350.1                             I 1 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  11950 2 +     14536 GG
i Dipodomys_stephensi.DipSte_scaffold_75855              I 1 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31424 2 -     42551 GG
i Dolichotis_patagonum.DolPat_scaffold_30833             I 1 C 0
s Eidolon_helvum.KE759718.1                                   7351 2 +     11740 AG
i Eidolon_helvum.KE759718.1                              I 1 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310216 2 +    607251 AG
i Elaphurus_davidianus.JRFZ01104969.1                    I 1 C 0
s Elephantulus_edwardii.JH947257.1                         1088939 2 +  10337057 GA
i Elephantulus_edwardii.JH947257.1                       I 1 C 0
s Enhydra_lutris.KZ291758.1                               16325705 2 -  41312741 AC
i Enhydra_lutris.KZ291758.1                              I 1 C 0
s Eptesicus_fuscus.JH977646.1                              2144001 2 -  14770903 AG
i Eptesicus_fuscus.JH977646.1                            I 1 C 0
s Equus_asinus.JREZ01000139.1                              1279686 2 +   4378816 AG
i Equus_asinus.JREZ01000139.1                            I 1 C 0
s Equus_caballus.CM000403.2                               18527507 2 -  39960074 AG
i Equus_caballus.CM000403.2                              I 1 C 0
s Equus_przewalskii.KK951119.1                               29522 2 +    498745 AG
i Equus_przewalskii.KK951119.1                           I 1 C 0
s Erinaceus_europaeus.JH835339.1                           3325276 2 -   7059049 AG
i Erinaceus_europaeus.JH835339.1                         T 79 C 0
s Erythrocebus_patas.Contig38                             21199865 2 -  21539334 TG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10791 2 +    133382 AG
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 1 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24728 2 -     44125 AG
i Eubalaena_japonica.EubJap_flattened_line_31514         I 1 C 0
s Felis_catus.AANG03299807.1                                   350 2 -       507 AC
i Felis_catus.AANG03299807.1                             I 1 C 0
s Felis_catus_fca126.CM031415.1                           20191928 2 + 205367284 AC
i Felis_catus_fca126.CM031415.1                          I 1 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  5453 2 -     36744 AC
i Felis_nigripes.FelNig_flattened_line_20823             I 1 C 0
s Fukomys_damarensis.KN121974.1                             848434 2 +   3816255 GA
i Fukomys_damarensis.KN121974.1                          I 1 C 0
s Galagoides_demidoff.k141_31856                              3131 2 -      3432 aa
i Galagoides_demidoff.k141_31856                         T 81 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25398 2 +     26054 GG
i Galeopterus_variegatus.GalVar_scaffold_56069           I 1 C 0
s Glis_glis.GliGli_scaffold_19807                            30289 2 +     49224 GC
i Glis_glis.GliGli_scaffold_19807                        I 1 C 0
s Gorilla_beringei.k141_3596273                              10354 2 -     32273 TG
i Gorilla_beringei.k141_3596273                          T 140 C 0
s Gorilla_gorilla.LT578341.1                             186332504 2 + 186649187 TG
i Gorilla_gorilla.LT578341.1                             T 140 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   30017 2 +     78134 AC
i Graphiurus_murinus.GraMur_scaffold_10447               I 1 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238090 2 +    327341 AC
i Helogale_parvula.HelPar_flattened_line_2585            I 1 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17416 2 +     36099 AG
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 1 C 0
s Heterocephalus_glaber.JH602082.1                        20659313 2 +  22651954 GA
i Heterocephalus_glaber.JH602082.1                       I 1 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 176 2 +       961 GG
i Heterohyrax_brucei.HetBruBak_scaffold_383740           I 1 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111971 2 +    128679 AG
i Hippopotamus_amphibius.HipAmp_scaffold_9076            I 1 C 0
s Hipposideros_armiger.JXIK01000431.1                       108310 2 +   1711038 AG
i Hipposideros_armiger.JXIK01000431.1                    I 1 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39751 2 +     43066 AG
i Hipposideros_galeritus.HipGal_scaffold_29171           I 1 C 0
s Hoolock_leuconedys.ctg274                                    429193 2 +    630532 TG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40555 2 +     55795 AC
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 1 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19782 2 -    143317 GG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 1 C 0
s Hylobates_agilis.k141_307679                               12111 2 -     15490 TG
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              54116 2 +     67168 TG
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189537769 2 - 191637585 TG
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3330661 2 -  11177569 TG
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80856 2 +    135385 GG
i Hystrix_cristata.HysCri_scaffold_5660                  I 1 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514523 2 -   7955117 GG
i Ictidomys_tridecemlineatus.JH393364.1                  I 1 C 0
s Indri_indri.k141_3655594                                   18100 2 +     31101 GG
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22332 2 +     23964 AG
i Inia_geoffrensis.IniGeo_flattened_line_48101           I 1 C 0
s Jaculus_jaculus.JH725527.1                               8271303 2 -   9596543 AG
i Jaculus_jaculus.JH725527.1                             I 5 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1599 2 -      3359 AG
i Kogia_breviceps.KogBre_flattened_line_192630           I 1 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    12175 2 -     42476 AG
i Lasiurus_borealis.LasBor_scaffold_32767                T 85 C 0
s Lepilemur_ankaranensis.k141_596936                          6734 2 -     23766 GG
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24681 2 +     45836 GG
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31592 2 -     32627 GG
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      22736 2 +     54090 GG
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3036038 2 +   3914936 AC
i Leptonychotes_weddellii.KB714746.1                     I 1 C 0
s Lipotes_vexillifer.KE559953.1                             267413 2 -    662738 AG
i Lipotes_vexillifer.KE559953.1                          I 1 C 0
s Lophocebus_aterrimus.ctg367                              1431390 2 +   1826925 TG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             633 2 +     11245 AA
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999468 2 +   6120653 AA
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214449 2 -  43346337 GG
i Loxodonta_africana.GL010049.1                          I 1 C 0
s Lycaon_pictus.CM007581.1                                17951655 2 -  59628241 GC
i Lycaon_pictus.CM007581.1                               I 1 C 0
s Macaca_arctoides.k141_2326796                               1575 2 +     40492 TG
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670835 2 +  60120075 TG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7333 2 -     26193 TG
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75127 2 -    114318 TG
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   846 2 -     23192 TG
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10299 2 -     29190 TG
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18866 2 +     37952 TG
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833954 2 + 187317192 TG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452515 2 -  25927173 TG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74715 2 +     89720 TG
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1712 2 +     20474 TG
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1513 2 -     14993 TG
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324386 2 -    668171 TG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15655 2 -     15935 TG
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20452 2 -     45290 TG
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87498 2 +     94391 AG
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 1 C 0
s Mandrillus_leucophaeus.scaffold280                      23932007 2 -  24302211 TG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346185 2 +    752769 TG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15543 2 +    737560 AG
i Manis_javanica.JSZB01003497.1                          I 1 C 0
s Manis_pentadactyla.KN006162.1                              46932 2 -    317179 AG
i Manis_pentadactyla.KN006162.1                          I 1 C 0
s Marmota_marmota.CZRN01000018.1                          33097373 2 -  40650429 GG
i Marmota_marmota.CZRN01000018.1                         I 1 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6730 1 -    207569 A-
i Megaderma_lyra.MegLyr_scaffold_4542                    I 1 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6169 2 +     13704 AC
i Mellivora_capensis.MelCap_flattened_line_69365         I 1 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3000 2 +     10310 AG
i Mesoplodon_bidens.MesBid_scaffold_108144               I 1 C 0
s Microcebus_murinus.CM007674.1                           18283260 2 -  93316391 GG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13355 2 -     19307 AG
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 1 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849029 2 +   8254450 AG
i Miniopterus_natalensis.LDJU01000034.1                  I 1 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32905 2 +     64694 AG
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 1 C 0
s Miopithecus_ogouensis.k141_534055                           3742 2 -     28506 TG
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62368 2 -     63350 AC
i Mirounga_angustirostris.MirAng_flattened_line_22144    I 1 C 0
s Mirza_zaza.k141_952172                                      4615 2 -     37649 GG
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26505 2 -    437263 AG
i Monodon_monoceros.MonMon_M_scaffold_103                I 1 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137761 2 -    366855 AG
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 1 C 0
s Moschus_moschiferus.MosMos_scaffold_61429                  27356 2 -     27816 AG
i Moschus_moschiferus.MosMos_scaffold_61429              I 1 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31291 2 +     37127 AC
i Mungos_mungo.MunMun_flattened_line_23663               I 1 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2282 2 +     14296 GT
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 1 C 0
s Mustela_putorius.JH418006.1                               297600 2 -  14710649 AC
i Mustela_putorius.JH418006.1                            I 1 C 0
s Myotis_brandtii.KE162005.1                                278236 2 -  10118263 AG
i Myotis_brandtii.KE162005.1                             I 1 C 0
s Myotis_davidii.KB100139.1                                1585793 2 -   6019432 AG
i Myotis_davidii.KB100139.1                              I 1 C 0
s Myotis_lucifugus.GL429869.1                              3902002 2 -   4330536 AG
i Myotis_lucifugus.GL429869.1                            I 1 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32561 2 +     33610 AG
i Myotis_myotis.MyoMyo_scaffold_28916                    I 1 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186042 2 +    196477 GA
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 1 C 0
s Nasalis_larvatus.k141_413338                                9755 2 +     21681 TG
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865461 2 +   7148211 AG
i Neophocaena_asiaeorientalis.KZ687982.1                 I 1 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756326 1 +    783361 -G
i Noctilio_leporinus.NocLep_scaffold_251                 I 1 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145916 2 -   9404916 GC
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 1 C 0
s Nycticebus_bengalensis.LG01                            102574437 2 - 196305487 AA
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2123 2 +      8486 AA
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744864 2 + 199412804 AA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355697 2 +   3988456 GG
i Ochotona_princeps.JH802162.1                           I 1 C 0
s Odobenus_rosmarus.KB229312.1                              500657 2 -   2017862 AC
i Odobenus_rosmarus.KB229312.1                           I 1 C 0
s Odocoileus_virginianus.KZ100018.1                         144589 2 +    630418 AT
i Odocoileus_virginianus.KZ100018.1                      I 1 C 0
s Orcinus_orca.KB316932.1                                  2781376 2 -  10937097 AG
i Orcinus_orca.KB316932.1                                I 1 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6774 2 -     18566 GA
i Orycteropus_afer.OryAfe_flattened_line_144387          I 1 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458670 2 -    559221 GC
i Otocyon_megalotis.JAEUCK010005147.1                    I 1 C 0
s Ovis_aries.CM001607.2                                   17584947 2 +  44047080 AG
i Ovis_aries.CM001607.2                                  I 1 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173368 2 -    191736 AG
i Ovis_canadensis.OviCan_scaffold_2572                   I 1 C 0
s Pan_paniscus.KQ411613.1                                    38543 2 +     80009 tg
i Pan_paniscus.KQ411613.1                                I 2405 C 0
s Pan_troglodytes.CM009242.2                             189137298 2 + 189151597 tg
i Pan_troglodytes.CM009242.2                             I 208 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  147075 2 +    230217 AC
i Panthera_onca.PanOnc_flattened_line_3271               I 1 C 0
s Panthera_pardus.KV860321.1                                259784 2 +  18783137 AC
i Panthera_pardus.KV860321.1                             I 1 C 0
s Panthera_tigris.KE722367.1                               4716931 2 -   8748460 AC
i Panthera_tigris.KE722367.1                             I 1 C 0
s Pantholops_hodgsonii.KE114653.1                          1264301 2 -   2937107 AG
i Pantholops_hodgsonii.KE114653.1                        I 1 C 0
s Papio_anubis.CM001495.2                                183437329 2 + 183742232 TG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1394 2 +     20448 TG
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20558013 2 +  20919399 TG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                    137 2 +     41871 TG
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_ursinus.k141_3428135                                  3415 2 +      9205 TG
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8810 2 -     78924 AC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 1 C 0
s Perodicticus_ibeanus.k141_855320                            4614 2 +     13100 AA
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             2982 2 +     25941 AA
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25297 2 +     32600 GG
i Perognathus_longimembris.PerPac_flattened_line_34437   I 1 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25782 2 -     29689 GA
i Petromus_typicus.PetTyp_scaffold_42190                 I 1 I 3
s Phocoena_phocoena.PhoPho_flattened_line_24159               8423 2 +     63832 AG
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 1 C 0
s Piliocolobus_badius.k141_1234363                           38271 2 +     62158 TG
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        32998 2 +     89929 TG
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34414 2 +     51399 TG
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290635 2 -  14605196 TG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              375 2 +     22620 AG
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 1 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34129 2 +     35617 AG
i Platanista_gangetica.PlaMin_flattened_line_32310       I 1 C 0
s Pongo_abelii.CM009266.2                                189125485 2 + 189387572 TG
i Pongo_abelii.CM009266.2                                I 309 C 0
s Pongo_pygmaeus.ctg66                                     9565089 2 +   9816681 TG
i Pongo_pygmaeus.ctg66                                   I 70 C 0
s Presbytis_comata.k141_677006                               67915 2 -     81375 TG
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9742 2 +     10147 TG
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9937 2 -     22811 GG
i Procavia_capensis.ProCapCap_scaffold_85530             I 1 C 0
s Propithecus_coquerelli.NW_012148875.1                     986314 2 +   2598838 GG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          24603 2 +     38485 GG
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                              764 2 +      4256 GG
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22122 2 +     35766 GG
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            305 2 -     24134 GG
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24117 2 -     67325 GG
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            362 2 -      6182 GG
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11143 2 -     21811 AG
i Pteronotus_parnellii.KE909381.1                        I 1 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36611 2 +     42204 AC
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 1 C 0
s Pteropus_alecto.KB030862.1                              22973621 2 +  28871421 AG
i Pteropus_alecto.KB030862.1                             I 1 I 3
s Pteropus_vampyrus.KN534172.1                                1558 2 -      8028 AG
i Pteropus_vampyrus.KN534172.1                           I 1 I 3
s Puma_concolor.QAVW01001104.1                            20270242 2 -  38429054 AC
i Puma_concolor.QAVW01001104.1                           I 1 C 0
s Pygathrix_cinerea.k141_1153803                              9744 2 -     91421 TG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603878 2 +   7812017 TG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9717 2 -     72585 TG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4837 2 +     55207 AT
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 1 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        366854 2 -   3329780 AG
i Rhinolophus_sinicus.LVEH01000134.1                     I 1 C 0
s Rhinopithecus_bieti.k119_217274                             1130 2 -     11128 TG
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230507 2 - 195417433 TG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7666215 2 +   7961872 TG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84606 2 -     96226 AA
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 1 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3490 1 +      4321 A-
i Saiga_tatarica.SaiTat_scaffold_373180                  I 1 C 0
s Semnopithecus_entellus.k141_11662                          14259 2 -     19888 TG
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21464 2 +     39453 TG
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            1988 2 +     27826 TG
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1510 2 -     19483 TG
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1572 2 +      7198 TG
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9832 2 +     15514 TG
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187626 2 -    191337 AG
i Solenodon_paradoxus.SolPar_flattened_line_5840         I 1 C 0
s Sorex_araneus.JH798187.1                                13646972 2 -  18376816 TG
i Sorex_araneus.JH798187.1                               T 64 C 0
s Spermophilus_dauricus.KZ294078.1                         1948165 2 -   3870691 GG
i Spermophilus_dauricus.KZ294078.1                       I 1 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27153 2 +     97271 AA
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14160 2 -    196729 AC
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 C 0
s Sus_scrofa.CM000828.4                                   62882408 2 -  69701581 AA
i Sus_scrofa.CM000828.4                                  I 1 C 0
s Symphalangus_syndactylus.tarseq_199                      1087808 2 -   1523678 TG
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6759 2 +     41958 AG
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 1 I 3
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69404 2 +    116680 GA
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 1 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115141 2 -    156842 AG
i Tapirus_indicus.TapInd_scaffold_9301                   I 1 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383596 2 +    539355 AG
i Tapirus_terrestris.TapTer_scaffold_755                 I 1 C 0
s Tarsius_lariang.k141_2201908                               10589 2 +     70052 GG
i Tarsius_lariang.k141_2201908                           C 0 I 1
s Tarsius_wallacei.k141_780063                               14894 2 +     25099 GG
i Tarsius_wallacei.k141_780063                           C 0 I 1
s Theropithecus_gelada.CM009954.1                        186422838 2 + 186847797 TG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103123 2 +    114563 GG
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 1 I 3
s Tonatia_saurophila.TonSau_scaffold_294                     78899 2 +    610378 AG
i Tonatia_saurophila.TonSau_scaffold_294                 I 1 C 0
s Trachypithecus_auratus.k141_722599                          5569 2 -     20410 TG
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9761 2 +     15221 TG
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5669 2 +     19930 TG
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2096 2 -     19997 TG
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42215 2 -     60166 TG
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9687 2 -     27529 TG
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9627 2 -     18194 TG
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3363 2 -     21137 TG
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2065 2 -     10723 TG
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1218 2 +      9834 TG
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19536 2 +     32220 TG
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933633 2 +   6242583 TG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2878 2 +     20839 TG
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    615 2 -      1748 AG
i Tragulus_javanicus.TraJav_scaffold_140459              T 71 C 0
s Tupaia_chinensis.KB320699.1                              2149526 2 +   4065304 GG
i Tupaia_chinensis.KB320699.1                            I 1 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     3145 2 -     10553 GG
i Tupaia_tana.TupTan_flattened_line_97126                I 1 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737623 2 +  33153633 AG
i Tursiops_truncatus.MRVK01000835.1                      I 1 C 0
s Uropsilus_gracilis.UroGra_scaffold_97021                    1854 2 -      4736 AG
i Uropsilus_gracilis.UroGra_scaffold_97021               I 1 C 0
s Ursus_maritimus.KK499267.1                               4846854 2 -   5085361 AC
i Ursus_maritimus.KK499267.1                             I 1 C 0
s Vicugna_pacos.KN270157.1                                 5368327 2 -   5488506 AG
i Vicugna_pacos.KN270157.1                               I 1 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7331 2 -     43706 GC
i Vulpes_lagopus.VulLag_flattened_line_30954             I 1 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19660 2 -     24430 GG
i Xerus_inauris.XerIna_scaffold_48378                    I 1 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1779 2 +      2932 AC
i Zalophus_californianus.ZalCal_flattened_line_63728     I 1 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9937 2 +     63895 GC
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 5 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11315 2 +     12536 AG
i Ziphius_cavirostris.ZipCav_flattened_line_71469        I 1 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Varecia_variegata.k141_1128296                              7155 0 +     24756 C
e Varecia_rubra.k141_590885                                   7107 0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   1874 68 +      8208 T
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    151381 45 -    313613 T
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414 0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Papio_papio.k141_802527                                     3591 59 +     27711 T
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.KL204047.1                            2025524 76 -   3037898 T
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5135 74 +     14753 T
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    15418 9 -    145209 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Lemur_catta.scaffold_24                                 15519761 0 -  30322482 C
e Hapalemur_occidentalis.k141_907772                          9234 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402 0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298 0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517 0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                               9432 0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267 0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247 0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321 0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369 0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369 0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184 0 -     25546 C
e Eulemur_collaris.k141_377015                                2154 0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453 0 -     14127 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            4816 68 -      6351 T
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                        986 1 +     62944 C
s Allenopithecus_nigroviridis.k141_3361533                    9251 1 -     52922 C
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9178 1 -     28001 C
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9304 1 -      9772 C
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            461 1 -     12518 C
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470222 1 +   4669795 C
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8771 1 -     19203 C
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3190 1 +      8260 C
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3420 1 +     27781 C
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3566 1 -     20310 C
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6550 1 +     29689 C
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             903 1 +      9989 C
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9238 1 -     27936 C
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9257 1 -     11289 C
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811633 1 +  39242232 C
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217324 1 -  21565898 C
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34444 1 -     53127 C
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1736 1 +      7159 C
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9249 1 -     27947 C
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9225 1 +     17596 C
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39719 1 -     41420 C
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chlorocebus_aethiops.ctg25                              18423188 1 -  18827391 C
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9631 1 -     50209 C
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416636 1 + 135778131 C
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1905165 1 +   2368649 C
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944810 1 + 200372422 C
i Colobus_guereza.LG01                                   I 27 C 0
s Colobus_polykomos.k141_906115                              31704 1 +     84244 C
i Colobus_polykomos.k141_906115                          I 27 C 0
s Erythrocebus_patas.Contig38                             21199867 1 -  21539334 C
i Erythrocebus_patas.Contig38                            C 0 C 0
s Gorilla_beringei.k141_3596273                              10356 1 -     32273 C
i Gorilla_beringei.k141_3596273                          C 0 I 3
s Gorilla_gorilla.LT578341.1                             186332506 1 + 186649187 C
i Gorilla_gorilla.LT578341.1                             C 0 I 13
s Hoolock_leuconedys.ctg274                                    429195 1 +    630532 C
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_307679                               12113 1 -     15490 C
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              54118 1 +     67168 C
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189537771 1 - 191637585 C
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3330663 1 -  11177569 C
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1431392 1 +   1826925 C
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                               1577 1 +     40492 C
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670837 1 +  60120075 C
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7335 1 -     26193 C
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75129 1 -    114318 C
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   848 1 -     23192 C
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10301 1 -     29190 C
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18868 1 +     37952 C
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833956 1 + 187317192 C
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452517 1 -  25927173 C
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74717 1 +     89720 C
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1714 1 +     20474 C
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1515 1 -     14993 C
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324388 1 -    668171 C
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15657 1 -     15935 C
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20454 1 -     45290 C
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23932009 1 -  24302211 C
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346187 1 +    752769 C
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3744 1 -     28506 C
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Nasalis_larvatus.k141_413338                                9757 1 +     21681 T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Pan_paniscus.KQ411613.1                                    38545 1 +     80009 c
i Pan_paniscus.KQ411613.1                                C 0 T 2402
s Pan_troglodytes.CM009242.2                             189137300 1 + 189151597 c
i Pan_troglodytes.CM009242.2                             C 0 n 0
s Papio_anubis.CM001495.2                                183437331 1 + 183742232 C
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1396 1 +     20448 C
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20558015 1 +  20919399 C
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                    139 1 +     41871 C
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_ursinus.k141_3428135                                  3417 1 +      9205 C
i Papio_ursinus.k141_3428135                             C 0 C 0
s Piliocolobus_badius.k141_1234363                           38273 1 +     62158 C
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33000 1 +     89929 C
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34416 1 +     51399 C
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290637 1 -  14605196 C
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189125487 1 + 189387572 C
i Pongo_abelii.CM009266.2                                C 0 I 204
s Pongo_pygmaeus.ctg66                                     9565091 1 +   9816681 C
i Pongo_pygmaeus.ctg66                                   C 0 I 1
s Presbytis_comata.k141_677006                               67917 1 -     81375 T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9744 1 +     10147 T
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Pygathrix_cinerea.k141_1153803                              9746 1 -     91421 T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603880 1 +   7812017 T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9719 1 -     72585 T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             1132 1 -     11128 T
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230509 1 - 195417433 T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7666217 1 +   7961872 T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Semnopithecus_entellus.k141_11662                          14261 1 -     19888 T
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21466 1 +     39453 T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            1990 1 +     27826 T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1512 1 -     19483 T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1574 1 +      7198 T
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9834 1 +     15514 T
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1087810 1 -   1523678 C
i Symphalangus_syndactylus.tarseq_199                    C 0 I 207
s Theropithecus_gelada.CM009954.1                        186422840 1 + 186847797 C
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          5571 1 -     20410 T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9763 1 +     15221 T
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5671 1 +     19930 T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2098 1 -     19997 T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42217 1 -     60166 T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9689 1 -     27529 T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9629 1 -     18194 T
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3365 1 -     21137 T
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2067 1 -     10723 T
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1220 1 +      9834 T
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19538 1 +     32220 T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933635 1 +   6242583 T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2880 1 +     20839 T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Loris_tardigradus.ctg83                                   999470 0 +   6120653 C
e Loris_lydekkerianus.k141_2539221                             635 0 +     11245 C
e Perodicticus_potto.k141_1092580                             2984 0 +     25941 C
e Perodicticus_ibeanus.k141_855320                            4616 0 +     13100 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            11317 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                       9939 0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_63728          1781 0 +      2932 C
e Xerus_inauris.XerIna_scaffold_48378                        19662 0 -     24430 C
e Vulpes_lagopus.VulLag_flattened_line_30954                  7333 0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5368329 0 -   5488506 C
e Varecia_variegata.k141_1128296                              7155 0 +     24756 C
e Varecia_rubra.k141_590885                                   7107 0 +     50397 C
e Ursus_maritimus.KK499267.1                               4846856 0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_97021                    1856 0 -      4736 C
e Tursiops_truncatus.MRVK01000835.1                       15737625 0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     3147 0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2149528 0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                    617 0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     78901 0 +    610378 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   1874 68 +      8208 T
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103125 3 +    114563 I
e Tarsius_wallacei.k141_780063                               14896 1 +     25099 I
e Tarsius_lariang.k141_2201908                               10591 1 +     70052 I
e Tapirus_terrestris.TapTer_scaffold_755                    383598 0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      115143 0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 69406 0 +    116680 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                 6761 3 +     41958 I
e Sus_scrofa.CM000828.4                                   62882410 0 -  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629              14162 0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             27155 0 +     97271 C
e Spermophilus_dauricus.KZ294078.1                         1948167 0 -   3870691 C
e Sorex_araneus.JH798187.1                                13646974 0 -  18376816 C
e Solenodon_paradoxus.SolPar_flattened_line_5840            187628 0 -    191337 C
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    151381 45 -    313613 T
e Saiga_tatarica.SaiTat_scaffold_373180                       3491 0 +      4321 C
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                84608 0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        366856 0 -   3329780 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4839 0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20270244 0 -  38429054 C
e Pteropus_vampyrus.KN534172.1                                1560 3 -      8028 I
e Pteropus_alecto.KB030862.1                              22973623 3 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         36613 0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            11145 0 -     21811 C
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Propithecus_verreauxi.k141_956661                            364 0 -      6182 C
e Propithecus_tattersalli.k141_790011                        24119 0 -     67325 C
e Propithecus_perrieri.k141_1200571                            307 0 -     24134 C
e Propithecus_edwardsi.k141_1176054                          22124 0 +     35766 C
e Propithecus_diadema.k141_357118                              766 0 +      4256 C
e Propithecus_coronatus.k141_347390                          24605 0 +     38485 C
e Propithecus_coquerelli.NW_012148875.1                     986316 0 +   2598838 C
e Prolemur_simus.MPIZ01000396.1                            2592414 0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                  9939 0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           34131 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              377 0 +     22620 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               8425 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     25784 3 -     29689 I
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25299 0 +     32600 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8812 0 -     78924 C
e Papio_papio.k141_802527                                     3591 59 +     27711 T
e Pantholops_hodgsonii.KE114653.1                          1264303 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4716933 0 -   8748460 C
e Panthera_pardus.KV860321.1                                259786 0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  147077 0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      173370 0 -    191736 C
e Ovis_aries.CM001607.2                                   17584949 0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       458672 0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               6776 0 -     18566 C
e Orcinus_orca.KB316932.1                                  2781378 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144591 0 +    630418 C
e Odobenus_rosmarus.KB229312.1                              500659 0 -   2017862 C
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1355699 0 +   3988456 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744866 0 + 199412804 C
e Nycticebus_coucang.k141_5327727                             2125 0 +      8486 C
e Nycticebus_bengalensis.LG01                            102574439 0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9145918 0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    756327 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5865463 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.KL204047.1                            2025524 76 -   3037898 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186044 0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        32563 0 +     33610 C
e Myotis_lucifugus.GL429869.1                              3902004 0 -   4330536 C
e Myotis_davidii.KB100139.1                                1585795 0 -   6019432 C
e Myotis_brandtii.KE162005.1                                278238 0 -  10118263 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               297602 0 -  14710649 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              2284 0 +     14296 C
e Murina_feae.MurFea_scaffold_85699                           5135 74 +     14753 T
e Mungos_mungo.MunMun_flattened_line_23663                   31293 0 +     37127 C
e Moschus_moschiferus.MosMos_scaffold_61429                  27358 0 -     27816 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 137763 0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    26507 0 -    437263 C
e Mirza_zaza.k141_952172                                      4617 0 -     37649 C
e Mirounga_angustirostris.MirAng_flattened_line_22144        62370 0 -     63350 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             32907 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849031 0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                13357 0 -     19307 C
e Microgale_talazaci.MicTal_scaffold_6613                    15418 9 -    145209 I
e Microcebus_murinus.CM007674.1                           18283262 0 -  93316391 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3002 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365              6171 0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                         6731 0 -    207569 C
e Marmota_marmota.CZRN01000018.1                          33097375 0 -  40650429 C
e Manis_pentadactyla.KN006162.1                              46934 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              15545 0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 87500 0 +     94391 C
e Lycaon_pictus.CM007581.1                                17951657 0 -  59628241 C
e Loxodonta_africana.GL010049.1                            4214451 0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             267415 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3036040 0 +   3914936 C
e Lepilemur_septentrionalis.k141_185316                      22738 0 +     54090 C
e Lepilemur_ruficaudatus.k141_420445                         31594 0 -     32627 C
e Lepilemur_dorsalis.k141_577674                             24683 0 +     45836 C
e Lepilemur_ankaranensis.k141_596936                          6736 0 -     23766 C
e Lemur_catta.scaffold_24                                 15519761 0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12177 0 -     42476 C
e Kogia_breviceps.KogBre_flattened_line_192630                1601 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8271305 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               22334 0 +     23964 C
e Indri_indri.k141_3655594                                   18102 0 +     31101 C
e Ictidomys_tridecemlineatus.JH393364.1                    7514525 0 -   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                      80858 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19784 0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  40557 0 +     55795 C
e Hipposideros_galeritus.HipGal_scaffold_29171               39753 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       108312 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               111973 0 +    128679 C
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 178 0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20659315 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17418 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               238092 0 +    327341 C
e Hapalemur_occidentalis.k141_907772                          9234 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402 0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298 0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517 0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   30019 0 +     78134 C
e Glis_glis.GliGli_scaffold_19807                            30291 0 +     49224 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_56069               25400 0 +     26054 C
e Galagoides_demidoff.k141_31856                              3133 0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848436 0 +   3816255 C
e Felis_nigripes.FelNig_flattened_line_20823                  5455 0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20191930 0 + 205367284 C
e Eulemur_sanfordi.k141_1122526                               9432 0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267 0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247 0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321 0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369 0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369 0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184 0 -     25546 C
e Eulemur_collaris.k141_377015                                2154 0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453 0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             24730 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           10793 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3325278 0 -   7059049 C
e Equus_przewalskii.KK951119.1                               29524 0 +    498745 C
e Equus_caballus.CM000403.2                               18527509 0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1279688 0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2144003 0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16325707 0 -  41312741 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1088941 0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       310218 0 +    607251 C
e Eidolon_helvum.KE759718.1                                   7353 0 +     11740 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 31426 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  11952 0 +     14536 C
e Dipodomys_ordii.KN672350.1                              18895742 0 +  37912305 C
e Dinomys_branickii.DinBra_scaffold_21862                    34212 0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    2421 0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  669346 0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8627846 0 +  20541912 C
e Delphinapterus_leucas.KZ290073.1                        16811117 0 +  35494412 C
e Daubentonia_madagascariensis.ctg71                      12532830 0 -  12879189 C
e Dasypus_novemcinctus.JH564415.1                            61006 0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1169 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 2786 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             24175 0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_603213              1027 2 +      1923 T
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          10434 0 -     20389 C
e Condylura_cristata.JH655891.1                           17545922 0 -  53390261 C
e Choloepus_hoffmanni.KN194906.1                            170192 0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15093 0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1248434 0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           12013 0 +     57038 C
e Cheirogaleus_major.k141_333249                             16664 0 -     52598 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            4816 68 -      6351 T
e Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2531 0 -      3715 C
e Cephalopachus_bancanus.k141_2037105                         4892 1 -      8605 I
e Cavia_tschudii.CavTsc_scaffold_8919                        98537 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18359662 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18347402 0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     89147 0 +    217609 C
e Castor_canadensis.CasCan_scaffold_2074                    133583 0 +    179628 C
e Carollia_perspicillata.CarPer_scaffold_92756                2815 0 -     11696 C
e Carlito_syrichta.NW_007259797.1                           140976 1 -    496798 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18059934 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18829214 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18496718 0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17955417 0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9031153 0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    181766 0 -    185531 C
e CanFam4.chr16                                           17795709 0 -  60362399 C
e Camelus_ferus.KB017975.1                                  399580 0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2331304 0 -   7040546 C
e Camelus_bactrianus.KN276810.1                            9998840 0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2818389 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18082900 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1124822 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20272262 0 +  48749331 C
e Bison_bison.KN261452.1                                    199057 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    26018 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         1947 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15191481 0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              49870 0 +     85213 C
e Avahi_laniger.k141_765380                                  49245 0 -     92717 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  2397 0 +     43469 C
e Arctocebus_calabarensis.k141_288239                        14383 0 +     17124 C
e Aplodontia_rufa.AprRuf_scaffold_68852                       7205 0 +     20879 C
e Antilocapra_americana.AntAmePen_scaffold_12469             97548 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183045 0 +    412891 C
e Ammotragus_lervia.NIVO01071767.1                          675096 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     64925 0 -     89534 C
e Ailurus_fulgens.LNAC01001112.1                             75145 0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9506922 3 -  29979442 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           823230 0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                        987 13 +     62944 T---------------------------A-T-G-TT---AGAG-GA-A
s Acinonyx_jubatus.LLWD01001279.1                           823230 14 -   1699592 T---------------------------A-CAA-TT---GTAA-GA-A
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506925 10 -  29979442 --------------------------------G-TT---AGAG-GA-A
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 3 C 0
s Ailurus_fulgens.LNAC01001112.1                             75145 14 -    347723 T---------------------------A-CAA-TT---AGAG-GA-T
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64925 13 -     89534 A---------------------------A-T-A-TT---AGAG-GA-A
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 9
s Allenopithecus_nigroviridis.k141_3361533                    9252 13 -     52922 T---------------------------A-T-G-TT---AGAG-GA-A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9179 13 -     28001 T---------------------------A-T-G-TT---AGAG-GA-A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9305 13 -      9772 T---------------------------A-T-G-TT---AGAG-GA-A
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            462 13 -     12518 T---------------------------A-T-G-TT---AGAG-GA-A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675096 13 -   2318259 T---------------------------T-C-A-TT---AGGG-GA-A
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183045 13 +    412891 T---------------------------A-C-T-CC---AGGG-GA-A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97548 13 -    100397 C---------------------------T-C-A-TT---AGAG-GA-A
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7205 13 +     20879 A---------------------------A-C-A-TG---AAAG-AA-A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 9
s Arctocebus_calabarensis.k141_288239                        14383 13 +     17124 T---------------------------C-A-G-TA---AGAG-GA-A
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2397 13 +     43469 T---------------------------G-C-A-TT---AGGG-GA-A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  49245 13 -     92717 T---------------------------A-T-G-TT---AGAG-GA-A
i Avahi_laniger.k141_765380                              C 0 I 2
s Avahi_peyrierasi.k141_1424874                              49870 13 +     85213 T---------------------------A-T-G-TT---AGAG-GA-A
i Avahi_peyrierasi.k141_1424874                          C 0 I 2
s Balaenoptera_acutorostrata.KI537508.1                   15191481 13 +  23207421 T---------------------------A-C-A-TT---AGAG-GA-A
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         1947 13 -     18090 T---------------------------A-C-A-TT---AGAG-GA-A
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26018 13 +     34529 T---------------------------T-C-A-TT---AGGG-GA-A
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    199057 13 -    288883 T---------------------------T-C-A-TT---AGAG-GA-A
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20272262 13 +  48749331 N---------------------------T-C-A-TT---AGAG-GA-A
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1124822 13 -   1948126 T---------------------------T-C-A-TT---AGAG-GA-A
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18082900 13 +  45695690 T---------------------------T-C-A-TT---AGAG-GA-A
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2818389 13 +   4408762 T---------------------------T-C-A-TT---AGAG-GA-A
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998840 13 -  17673402 T---------------------------A-C-G-TT---AGAG-GA-A
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331304 13 -   7040546 T---------------------------A-C-G-TT---AGAG-GA-A
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399580 13 -   1652518 T---------------------------A-C-G-TT---AGAG-GA-A
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795709 14 -  60362399 T---------------------------A-CAA-TT---ATAG-GA-A
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181766 14 -    185531 T---------------------------A-CAA-TT---ATAG-GA-A
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031153 14 -   9314153 T---------------------------A-CAA-TT---ATAG-GA-A
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955417 14 -  59632846 T---------------------------A-CAA-TT---ATAG-GA-A
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496718 14 +  63665305 T---------------------------A-CAA-TT---ATAG-GA-A
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18829214 13 +  46296322 T---------------------------T-C-A-TC---AGGG-GG-A
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18059934 13 -  44709034 T---------------------------T-C-A-TC---AGGG-GG-A
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           140977 13 -    496798 T---------------------------G-T-G-TT---AGAg-aa-a
i Carlito_syrichta.NW_007259797.1                        I 1 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2815 13 -     11696 T---------------------------G-C-A-CT---AGGG-GA-G
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133583 13 +    179628 C---------------------------T-C-A-TC---AGAG-GG-A
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 7
s Catagonus_wagneri.CatWag_scaffold_2839                     89147 13 +    217609 T---------------------------A-C-A-CT---AGAG-GA-C
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18347402 13 -  23392119 T---------------------------A-C-A-TT---ACAG-GA-A
i Cavia_aperea.AVPZ01000300.1                            C 0 I 9
s Cavia_porcellus.DS562891.1                              18359662 13 -  23407841 T---------------------------A-C-A-TT---ACAG-GA-A
i Cavia_porcellus.DS562891.1                             C 0 I 9
s Cavia_tschudii.CavTsc_scaffold_8919                        98537 13 +    143979 T---------------------------A-C-A-TT---ACAG-GA-A
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 I 9
s Cephalopachus_bancanus.k141_2037105                         4893 13 -      8605 T---------------------------G-T-G-TT---AGAG-AA-A
i Cephalopachus_bancanus.k141_2037105                    I 1 C 0
s Ceratotherium_simum.JH767749.1                          12227813 13 +  27778364 T---------------------------A-C-A-TT---AGAG-GA-A
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2531 13 -      3715 T---------------------------A-C-A-TT---AGAG-GA-A
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470223 13 +   4669795 T---------------------------A-T-G-TT---AGAG-GA-A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8772 13 -     19203 T---------------------------A-T-G-TT---AGAG-GA-A
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3191 13 +      8260 T---------------------------A-T-G-TT---AGAG-GA-A
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3421 13 +     27781 T---------------------------A-T-G-TT---AGAG-GA-A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3567 13 -     20310 T---------------------------A-T-G-TT---AGAG-GA-A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6551 13 +     29689 T---------------------------A-T-G-TT---AGAG-GA-A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             904 13 +      9989 T---------------------------A-T-G-TT---AGAA-GA-A
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9239 13 -     27936 T---------------------------A-T-G-TT---AGAG-GA-A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9258 13 -     11289 T---------------------------A-T-G-TT---AGAG-GA-A
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811634 13 +  39242232 T---------------------------A-T-G-TT---AGAG-GA-A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217325 13 -  21565898 T---------------------------A-T-G-TT---AGAG-GA-A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34445 13 -     53127 T---------------------------A-T-G-TT---AGAG-GA-A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1737 13 +      7159 T---------------------------A-T-G-TT---AGAG-GA-A
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9250 13 -     27947 T---------------------------A-T-G-TT---AGAG-GA-A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9226 13 +     17596 T---------------------------G-G-G-TT---AGAG-GA-A
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39720 13 -     41420 T---------------------------A-T-G-TT---AGAG-GA-A
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Cheirogaleus_major.k141_333249                             16664 13 -     52598 T---------------------------A-T-G-TT---AGAG-GA-A
i Cheirogaleus_major.k141_333249                         C 0 I 2
s Cheirogaleus_medius.k141_1055463                           12013 13 +     57038 T---------------------------A-T-G-TT---AGAG-GA-A
i Cheirogaleus_medius.k141_1055463                       C 0 I 2
s Chinchilla_lanigera.JH722012.1                           1248434 13 +   2543920 T---------------------------A-A-A-AT---ACAG-GA-A
i Chinchilla_lanigera.JH722012.1                         C 0 I 9
s Chlorocebus_aethiops.ctg25                              18423189 13 -  18827391 T---------------------------A-T-G-TT---AGAG-GA-A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9632 13 -     50209 T---------------------------A-T-G-TT---AGAG-GA-A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416637 13 + 135778131 T---------------------------A-T-G-TT---AGAG-GA-A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15093 12 +     19366 T---------------------------G-A-C-TA---AGG--GA-A
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170192 12 +    839153 T---------------------------G-A-C-TA---AGG--GA-A
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1905166 13 +   2368649 T---------------------------G-T-G-TT---AGAG-GA-A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944811 13 + 200372422 T---------------------------G-T-G-TT---AGAG-GA-A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31705 13 +     84244 T---------------------------G-T-G-TT---AGAG-GA-A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545922 13 -  53390261 T---------------------------A-C-A-CT---GGAG-AA-A
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10434 13 -     20389 T---------------------------A-T-G-TT---AGG--GAAA
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_287352               327  5 +      4208 T---------------------------A-G-A-T-------------
i Crocidura_indochinensis.CroInd_scaffold_287352         T 52 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24175 14 -     87169 T---------------------------A-AAA-TT---ATAG-CA-A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2786 13 +      5455 T---------------------------A-C-A-TT---ACAG-GA-A
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 I 9
s Dasyprocta_punctata.DasPun_flattened_line_206793            1169 13 +      3576 T---------------------------A-C-A-TT---ACAG-GA-A
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 I 9
s Dasypus_novemcinctus.JH564415.1                            61006 12 +   2246927 T---------------------------G-A-C-TA---AGG--AA-G
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532830 13 -  12879189 T---------------------------A-T-G-TT---AGAG-GA-A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811117 13 +  35494412 T---------------------------A-C-A-TT---AGAG-GA-A
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8627846 13 +  20541912 T---------------------------G-C-A-CT---AGGG-GA-A
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669346 13 +   1390856 T---------------------------A-C-A-TT---AGAG-GA-A
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2421 13 +    198055 T---------------------------A-C-A-TT---AGAG-GA-A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34212 13 +     67921 T---------------------------A-C-A-AT---ACAG-GA-A
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 9
s Dipodomys_ordii.KN672350.1                              18895742 13 +  37912305 A---------------------------A-C-A-TT---Caaa-ga-a
i Dipodomys_ordii.KN672350.1                             C 0 I 9
s Dipodomys_stephensi.DipSte_scaffold_75855                  11952 13 +     14536 A---------------------------A-C-A-TT---CAAA-GA-A
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 I 9
s Dolichotis_patagonum.DolPat_scaffold_30833                 31426 13 -     42551 T---------------------------A-C-A-TT---ACAG-GA-A
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 I 9
s Eidolon_helvum.KE759718.1                                   7353 13 +     11740 T---------------------------AAT-A-TT---AGG--GA-A
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310218 13 +    607251 T---------------------------T-C-A-TT---AGAG-GA-A
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1088941 13 +  10337057 G---------------------------G-C-C-TA---AAGG-GA-A
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16325707 14 -  41312741 T---------------------------A-CAA-TT---AGAG-GA-A
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144003 13 -  14770903 T---------------------------A-C-A-CT---AGGT-GA-A
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279688 13 +   4378816 T---------------------------A-C-A-TT---AGAG-GA-A
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527509 13 -  39960074 T---------------------------A-C-A-TT---AGAG-GA-A
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29524 13 +    498745 T---------------------------A-C-A-TT---AGAG-GA-A
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3325278 13 -   7059049 T---------------------------A-C-A-TT---AGGG-GA-A
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21199868 13 -  21539334 T---------------------------A-T-G-TT---AGAG-GA-A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10793 13 +    133382 T---------------------------A-C-A-TT---AGAG-GA-A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24730 13 -     44125 T---------------------------A-C-A-TT---AGAG-GA-A
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.AANG03299807.1                                   352 14 -       507 T---------------------------A-CAA-TT---TTAA-GC-A
i Felis_catus.AANG03299807.1                             C 0 C 0
s Felis_catus_fca126.CM031415.1                           20191930 14 + 205367284 T---------------------------A-CAA-TT---TTAA-GC-A
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  5455 14 -     36744 T---------------------------A-CAA-TT---TTAA-GC-A
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             848436 13 +   3816255 T---------------------------A-T-A-TT---AGAG-GA-A
i Fukomys_damarensis.KN121974.1                          C 0 I 9
s Galagoides_demidoff.k141_31856                              3133 16 -      3432 g---------------------------c-a-g-tcctgagag-ga-a
i Galagoides_demidoff.k141_31856                         C 0 I 7
s Galeopterus_variegatus.GalVar_scaffold_56069               25400 13 +     26054 T---------------------------A-C-A-TT---AGAG-AA-A
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30291 13 +     49224 T---------------------------T-C-A-TT---AAAG-GA-A
i Glis_glis.GliGli_scaffold_19807                        C 0 I 8
s Gorilla_beringei.k141_3596273                              10360 10 -     32273 --------------------------------G-TT---ACAG-GA-A
i Gorilla_beringei.k141_3596273                          I 3 I 34
s Gorilla_gorilla.CYUI03001814.1                             27012 13 -     31004 t---------------------------a-t-a-tt---agag-ga-a
i Gorilla_gorilla.CYUI03001814.1                         I 5 T 390
s Graphiurus_murinus.GraMur_scaffold_10447                   30019 13 +     78134 T---------------------------A-C-A-TT---AAAG-GA-A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 8
s Helogale_parvula.HelPar_flattened_line_2585               238092 14 +    327341 T---------------------------A-CAA-TT---ATAG-CA-A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17418 13 +     36099 T---------------------------T-C-A-TC---AGGG-GA-A
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20659315 13 +  22651954 C---------------------------A-C-A-TT---AGAG-GA-A
i Heterocephalus_glaber.JH602082.1                       C 0 I 9
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 178 13 +       961 T---------------------------G-C-A-TA---AGAG-GA-A
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111973 13 +    128679 T---------------------------A-C-A-TT---AGAG-GA-A
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 I 9
s Hipposideros_armiger.JXIK01000431.1                       108312 13 +   1711038 T---------------------------A-C-A-TG---AGG-AGA-A
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 8
s Hipposideros_galeritus.HipGal_scaffold_29171               39753 13 +     43066 T---------------------------A-C-A-TG---AGG-AGA-A
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 I 8
s Hoolock_leuconedys.ctg274                                    429196 13 +    630532 T---------------------------A-T-G-TT---AGAG-GA-A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40557 14 +     55795 T---------------------------A-TAA-TT---ATAA-CA-A
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19784 13 -    143317 T---------------------------A-C-A-TT---TCAG-GA-A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 9
s Hylobates_agilis.k141_307679                               12114 13 -     15490 T---------------------------A-T-G-TT---AGAG-GA-A
i Hylobates_agilis.k141_307679                           C 0 I 206
s Hylobates_klossii.k141_282416                              54119 13 +     67168 T---------------------------A-T-G-TT---AGAG-GA-A
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189537772 13 - 191637585 T---------------------------A-T-G-TT---AGAG-GA-A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3330664 13 -  11177569 T---------------------------A-T-G-TT---AGAG-GA-A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80858 13 +    135385 T---------------------------A-T-A-TT---AGAA-GA-A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 9
s Ictidomys_tridecemlineatus.JH393364.1                    7514525 13 -   7955117 T---------------------------A-C-A-TT---ATAG-AA-A
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 9
s Indri_indri.k141_3655594                                   18102 13 +     31101 T---------------------------A-T-G-TT---AGAG-GA-A
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22334 13 +     23964 G---------------------------A-C-A-TT---AGAG-GA-A
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271305 13 -   9596543 T---------------------------A-C-A-TT---AGAG-AA-A
i Jaculus_jaculus.JH725527.1                             C 0 I 9
s Kogia_breviceps.KogBre_flattened_line_192630                1601 13 -      3359 T---------------------------A-C-A-TT---AGAG-GA-A
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    12177 18 -     42476 T----------------------ACAGTA-C-A-CT---AGGT-GA-A
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 22
s Lepilemur_ankaranensis.k141_596936                          6736 13 -     23766 T---------------------------G-C-G-TT---AGAG-GA-A
i Lepilemur_ankaranensis.k141_596936                     C 0 I 5
s Lepilemur_dorsalis.k141_577674                             24683 13 +     45836 T---------------------------G-C-G-TT---AGAG-GA-A
i Lepilemur_dorsalis.k141_577674                         C 0 I 5
s Lepilemur_ruficaudatus.k141_420445                         31594 13 -     32627 T---------------------------G-T-G-TT---AGAG-GA-A
i Lepilemur_ruficaudatus.k141_420445                     C 0 I 5
s Lepilemur_septentrionalis.k141_185316                      22738 13 +     54090 T---------------------------G-C-G-TT---AGAG-GA-A
i Lepilemur_septentrionalis.k141_185316                  C 0 I 5
s Leptonychotes_weddellii.KB714746.1                       3036040 14 +   3914936 T---------------------------A-CAA-TT---AGAG-GA-A
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             267415  8 -    662738 T---------------------------A-C-A-TT---AG-------
i Lipotes_vexillifer.KE559953.1                          C 0 I 2
s Lophocebus_aterrimus.ctg367                              1431393 13 +   1826925 T---------------------------A-C-G-TT---AGAG-GA-A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             635 13 +     11245 T---------------------------C-A-G-TC---AGAG-GA-A
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999470 14 +   6120653 T---------------------------C-A-GTTC---AGAG-GA-A
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214451 13 -  43346337 T---------------------------G-C-C-CA---AGTG-GA-A
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951657 14 -  59628241 T---------------------------A-CAA-TT---ATAG-GA-A
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               1578 13 +     40492 C---------------------------A-T-G-TT---AGAG-GA-A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670838 13 +  60120075 T---------------------------A-T-G-TT---AGAG-GA-A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7336 13 -     26193 T---------------------------A-T-G-TT---AGAG-GA-A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75130 13 -    114318 T---------------------------A-T-G-TT---AGAG-GA-A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   849 13 -     23192 T---------------------------A-T-G-TT---AGAG-GA-A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10302 13 -     29190 T---------------------------A-T-G-TT---AGAG-GA-A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18869 13 +     37952 T---------------------------A-T-G-TT---AGAG-GA-A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833957 13 + 187317192 T---------------------------A-T-G-TT---AGAG-GA-A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452518 13 -  25927173 T---------------------------A-T-G-TT---AGAG-GA-A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74718 13 +     89720 T---------------------------A-T-G-TT---AGAG-GA-A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1715 13 +     20474 T---------------------------A-T-G-TT---AGAG-GA-A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1516 13 -     14993 T---------------------------A-T-G-TT---AGAG-GA-A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324389 13 -    668171 T---------------------------A-T-G-TT---AGAG-GA-A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15658 13 -     15935 T---------------------------A-T-G-TT---AGAG-GA-A
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20455 13 -     45290 T---------------------------A-T-G-TT---AGAG-GA-A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87500 12 +     94391 T---------------------------A-T-A-TT---AGG--GA-A
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23932010 13 -  24302211 T---------------------------A-T-G-TT---AGAG-GA-A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346188 13 +    752769 T---------------------------A-T-G-TT---AGAG-GA-A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15545 13 +    737560 T---------------------------A-C-A-TT---AGAG-GG-G
i Manis_javanica.JSZB01003497.1                          C 0 I 4
s Manis_pentadactyla.KN006162.1                              46934 13 -    317179 T---------------------------A-C-A-TT---AGAG-GG-G
i Manis_pentadactyla.KN006162.1                          C 0 I 4
s Marmota_marmota.CZRN01000018.1                          33097375 13 -  40650429 T---------------------------A-C-a-tt---aaag-aa-a
i Marmota_marmota.CZRN01000018.1                         C 0 I 9
s Megaderma_lyra.MegLyr_scaffold_4542                         6731  8 -    207569 T---------------------------A-C-A-TT---AG-------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 5
s Mellivora_capensis.MelCap_flattened_line_69365              6171 14 +     13704 T---------------------------A-TAA-TT---AGAG-GA-A
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s Mesoplodon_bidens.MesBid_scaffold_108144                    3002 13 +     10310 T---------------------------A-C-G-TT---AGAG-GA-A
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18283262 13 -  93316391 T---------------------------A-C-A-TT---AGAG-GA-A
i Microcebus_murinus.CM007674.1                          C 0 I 5
s Micronycteris_hirsuta.MicHir_scaffold_52381                13357 13 -     19307 T---------------------------G-C-A-CT---AGGG-GA-A
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849031 13 +   8254450 C---------------------------A-C-A-TT---AGGT-GA-A
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32907 13 +     64694 C---------------------------A-C-A-TT---AGGT-GA-A
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3745 13 -     28506 T---------------------------A-T-G-TT---AAAG-GA-A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62370 14 -     63350 T---------------------------A-CAA-TT---AGAG-GA-A
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      4617 13 -     37649 T---------------------------A-T-G-TT---AGAG-GA-A
i Mirza_zaza.k141_952172                                 C 0 I 5
s Monodon_monoceros.MonMon_M_scaffold_103                    26507 13 -    437263 T---------------------------A-C-A-TT---AGAG-GA-A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137763 13 -    366855 G---------------------------A-C-A-CG---AGGC-GA-A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_61429                  27358 13 -     27816 A---------------------------T-C-A-TT---AGAG-GA-A
i Moschus_moschiferus.MosMos_scaffold_61429              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31293 14 +     37127 T---------------------------A-CAA-TT---ATAG-CA-A
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5061  9 +     14753 ----------------------------------CT---AGGT-GA-A
i Murina_feae.MurFea_scaffold_85699                      T 74 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2284 13 +     14296 T---------------------------G-C-A-TT---AAAG-GA-A
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 8
s Mustela_putorius.JH418006.1                               297602 14 -  14710649 T---------------------------A-CAA-TT---AGAG-GA-A
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                278238  6 -  10118263 T---------------------------A-C-A-CT------------
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585795  6 -   6019432 T---------------------------A-C-A-CT------------
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902004  6 -   4330536 T---------------------------A-C-A-CT------------
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32563  6 +     33610 T---------------------------A-C-A-CT------------
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186044 12 +    196477 T---------------------------G-A-C-TA---AGG--GA-A
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025448 11 -   3037898 ------------------------------C-A-TT---AGAG-GC-A
i Nannospalax_galili.KL204047.1                          T 76 I 9
s Nasalis_larvatus.k141_413338                                9758 13 +     21681 T---------------------------G-T-G-TT---AGAG-GA-A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865463 13 +   7148211 T---------------------------A-C-A-TT---AGAG-GA-A
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756327 13 +    783361 T---------------------------G-C-A-CT---AGGT-GA-A
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145918 14 -   9404916 T---------------------------A-CAA-TT---ATAG-GA-A
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102574439 13 - 196305487 T---------------------------C-A-G-TC---AGAG-GA-A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2125 13 +      8486 T---------------------------C-A-G-TC---AGAG-GA-A
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744866 13 + 199412804 T---------------------------C-A-G-TC---AGAG-GA-A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355699 12 +   3988456 T---------------------------G-C-A-TT---TGA--GA-A
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              500659 14 -   2017862 T---------------------------A-CAA-TT---AGAG-GA-A
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         144591 13 +    630418 T---------------------------T-C-A-TT---AGAG-GA-A
i Odocoileus_virginianus.KZ100018.1                      C 0 I 5
s Orcinus_orca.KB316932.1                                  2781378 13 -  10937097 T---------------------------A-C-A-TT---AGAG-GA-A
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6776 13 -     18566 T---------------------------G-C-T-TG---AGGG-GA-A
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458672 14 -    559221 T---------------------------A-CAA-TT---ATAG-GA-A
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17584949 13 +  44047080 T---------------------------T-C-A-TC---AGGG-GA-A
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173370 13 -    191736 T---------------------------T-C-A-TC---AGGG-GA-A
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    36144 10 +     80009 --------------------------------G-TT---AGAG-GA-A
i Pan_paniscus.KQ411613.1                                T 2402 I 2405
s Pan_troglodytes.CM009242.2                             187570773 13 + 189151597 t---------------------------a-t-g-tt---agag-ga-a
i Pan_troglodytes.CM009242.2                             n 0 n 0
s Panthera_onca.PanOnc_flattened_line_3271                  147077 14 +    230217 T---------------------------A-CAA-TT---ATAG-GA-A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                259786 14 +  18783137 T---------------------------A-CAA-TT---ATAG-GA-A
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4716933 14 -   8748460 T---------------------------A-CAA-TT---ATAG-GA-A
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1264303 13 -   2937107 T---------------------------T-C-A-TT---AGGG-GA-A
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183437332 13 + 183742232 T---------------------------A-C-G-TT---AGAG-GA-A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1397 13 +     20448 T---------------------------G-C-G-TT---AGAG-GA-G
i Papio_cynocephalus.k141_4307930                        C 0 I 93
s Papio_hamadryas.Contig39                                20558016 13 +  20919399 T---------------------------A-C-G-TT---AGAG-GA-A
i Papio_hamadryas.Contig39                               C 0 I 279
s Papio_kindae.k141_1936966                                    140 13 +     41871 T---------------------------A-C-G-TT---AGAG-GA-G
i Papio_kindae.k141_1936966                              C 0 I 93
s Papio_ursinus.k141_3428135                                  3418 13 +      9205 T---------------------------G-C-G-TT---AGAG-GA-G
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8812 14 -     78924 T---------------------------C-CAG-TT---ATAG-GA-A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            4616 13 +     13100 T---------------------------C-A-G-TC---AGAG-GA-A
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             2984 13 +     25941 T---------------------------C-A-G-TC---AGAG-GA-A
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25299 13 +     32600 A---------------------------A-C-A-TT---AGAA-AA-A
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25787  9 -     29689 ----------------------------------TT---TGTA-GA-G
i Petromus_typicus.PetTyp_scaffold_42190                 I 3 I 9
s Phocoena_phocoena.PhoPho_flattened_line_24159               8425 13 +     63832 T---------------------------A-C-A-TT---AGAG-GA-A
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38274 13 +     62158 T---------------------------G-T-G-TT---AGAA-GA-A
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33001 13 +     89929 T---------------------------G-T-G-TT---AGAG-GA-A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34417 13 +     51399 T---------------------------G-T-G-TT---AGAG-GA-A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290638 13 -  14605196 T---------------------------G-T-G-TC---AGAG-GA-A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              377 13 +     22620 T---------------------------A-C-A-CT---AGGT-AA-A
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34131 13 +     35617 T---------------------------A-C-A-TT---AGAG-GA-A
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189125692 13 + 189387572 T---------------------------A-T-G-TT---AGAG-GA-T
i Pongo_abelii.CM009266.2                                I 204 T 206
s Pongo_pygmaeus.ctg66                                     9565093 10 +   9816681 --------------------------------G-TT---AGAG-GA-A
i Pongo_pygmaeus.ctg66                                   I 1 C 0
s Presbytis_comata.k141_677006                               67918 13 -     81375 T---------------------------G-T-G-TT---AGAG-GA-A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9745 13 +     10147 T---------------------------G-T-G-TT---AGAG-GA-A
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9939 13 -     22811 T---------------------------G-C-C-TA---AGAG-GA-A
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986316 13 +   2598838 T---------------------------A-C-G-TT---AGAG-GA-A
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 2
s Propithecus_coronatus.k141_347390                          24605 13 +     38485 T---------------------------A-C-G-TT---AGAG-GA-A
i Propithecus_coronatus.k141_347390                      C 0 I 2
s Propithecus_diadema.k141_357118                              766 13 +      4256 T---------------------------A-C-G-TT---AGAG-GA-A
i Propithecus_diadema.k141_357118                        C 0 I 2
s Propithecus_edwardsi.k141_1176054                          22124 13 +     35766 T---------------------------A-C-G-TT---AGAG-GA-A
i Propithecus_edwardsi.k141_1176054                      C 0 I 2
s Propithecus_perrieri.k141_1200571                            307 13 -     24134 T---------------------------A-C-G-TT---AGAG-GA-A
i Propithecus_perrieri.k141_1200571                      C 0 I 2
s Propithecus_tattersalli.k141_790011                        24119 13 -     67325 T---------------------------A-C-G-TT---AGAG-GA-A
i Propithecus_tattersalli.k141_790011                    C 0 I 2
s Propithecus_verreauxi.k141_956661                            364 13 -      6182 T---------------------------A-C-G-TT---AGAG-GA-A
i Propithecus_verreauxi.k141_956661                      C 0 I 2
s Pteronotus_parnellii.KE909381.1                            11145 13 -     21811 T---------------------------G-T-G-CT---AGGT-GA-A
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36613 14 +     42204 T---------------------------A-CAA-TT---AGAG-GA-C
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973626  9 +  28871421 --------------------------------A-TT---AGG--GA-A
i Pteropus_alecto.KB030862.1                             I 3 C 0
s Pteropus_vampyrus.KN534172.1                                1563  9 -      8028 --------------------------------A-TT---AGG--GA-A
i Pteropus_vampyrus.KN534172.1                           I 3 C 0
s Puma_concolor.QAVW01001104.1                            20270244 14 -  38429054 T---------------------------A-CAA-TT---TTAA-GA-A
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                              9747 13 -     91421 T---------------------------G-T-G-TT---AGAG-GA-A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603881 13 +   7812017 T---------------------------G-T-G-TT---AGAG-GA-A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9720 13 -     72585 T---------------------------G-T-G-TT---AGAG-GA-A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4839 13 +     55207 T---------------------------T-C-A-TT---AGAG-GA-A
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 5
s Rhinolophus_sinicus.LVEH01000134.1                        366856 13 -   3329780 T---------------------------A-C-A-TG---AGG-ACA-A
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             1133 13 -     11128 T---------------------------G-T-G-TG---AGAG-GA-A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230510 13 - 195417433 T---------------------------G-T-G-TG---AGAG-GA-A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7666218 13 +   7961872 T---------------------------G-T-G-TG---AGAG-GA-A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84608 13 -     96226 T---------------------------AAT-G-TT---AGG--GA-A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3491 13 +      4321 T---------------------------T-C-A-TT---AGGG-GA-A
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151336 13 -    313613 T---------------------------A-C-A-TT---GGAG-GA-A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 T 45 C 0
s Semnopithecus_entellus.k141_11662                          14262 13 -     19888 T---------------------------G-T-G-TT---AGAG-GA-A
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21467 13 +     39453 T---------------------------G-T-G-TT---AGAG-GA-A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            1991 13 +     27826 T---------------------------G-T-G-TT---AGAG-GA-A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1513 13 -     19483 T---------------------------G-T-G-TT---AGAG-GA-A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1575 13 +      7198 T---------------------------G-T-G-TT---AGAG-GA-A
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9835 13 +     15514 T---------------------------G-T-G-TT---AGAG-GA-A
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187628 13 -    191337 T---------------------------G-T-A-TT---AGAG-AA-A
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13646974  5 -  18376816 A---------------------------A-A-G-T-------------
i Sorex_araneus.JH798187.1                               C 0 I 1
s Spermophilus_dauricus.KZ294078.1                         1948167 13 -   3870691 T---------------------------A-C-A-TT---ATAG-AA-A
i Spermophilus_dauricus.KZ294078.1                       C 0 I 9
s Spilogale_gracilis.SpiGra_flattened_line_13525             27155 14 +     97271 T---------------------------A-CAA-TT---AGAG-GA-A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14162 14 -    196729 T---------------------------A-CAA-TC---ATAG-CA-A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   62882410 13 -  69701581 T---------------------------T-C-A-TT---AGAG-GA-C
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1088018 13 -   1523678 T---------------------------A-T-G-TT---AGAG-GA-A
i Symphalangus_syndactylus.tarseq_199                    I 207 T 207
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6764  9 +     41958 ----------------------------------TC---AGGT-GA-A
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 3 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69406 12 +    116680 T---------------------------G-A-C-TA---AGG--GA-A
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115143 13 -    156842 T---------------------------A-C-A-TT---AGAG-GA-A
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383598 13 +    539355 T---------------------------A-C-A-TT---AGAG-GA-A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10592 13 +     70052 T---------------------------A-T-G-TT---AGAG-AA-A
i Tarsius_lariang.k141_2201908                           I 1 C 0
s Tarsius_wallacei.k141_780063                               14897 13 +     25099 T---------------------------A-T-G-TT---AGAG-AA-A
i Tarsius_wallacei.k141_780063                           I 1 C 0
s Theropithecus_gelada.CM009954.1                        186422841 13 + 186847797 T---------------------------A-C-G-TT---AGAG-GA-A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103128  9 +    114563 ----------------------------------TT---AGAG-GA-A
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 3 I 9
s Tonatia_saurophila.TonSau_scaffold_294                     78901 13 +    610378 T---------------------------G-C-A-CT---AGGG-GA-A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          5572 13 -     20410 T---------------------------G-T-G-TT---AGAG-GA-A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9764 13 +     15221 T---------------------------G-T-G-TT---AGAG-GA-A
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5672 13 +     19930 T---------------------------G-T-G-TT---AGAG-GA-A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2099 13 -     19997 T---------------------------G-T-G-TT---AGAG-GA-A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42218 13 -     60166 T---------------------------G-T-G-TT---AGAG-GA-A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9690 13 -     27529 T---------------------------G-T-G-TT---AGAG-GA-A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9630 13 -     18194 T---------------------------G-T-G-TT---AGAG-GA-A
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3366 13 -     21137 T---------------------------G-T-G-TT---AGAG-GA-A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2068 13 -     10723 T---------------------------G-T-G-TT---AGAG-GA-A
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1221 13 +      9834 T---------------------------G-T-G-TT---AGAG-GA-A
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19539 13 +     32220 T---------------------------G-T-G-TT---AGAG-GA-A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933636 13 +   6242583 T---------------------------G-T-G-TT---AGAG-GA-A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2881 13 +     20839 T---------------------------G-T-G-TT---AGAG-GA-A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    617 13 -      1748 T---------------------------T-C-A-TT---AGAG-GA-A
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 I 2
s Tupaia_chinensis.KB320699.1                              2149528 40 +   4065304 TTNNNNNNNNNNNNNNNNNNNNNNNNNNN-N-N-NN---AGAG-GA-A
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     3147 13 -     10553 T---------------------------C-C-A-GC---AGAG-GA-A
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 9
s Tursiops_truncatus.MRVK01000835.1                       15737625 13 +  33153633 T---------------------------A-C-A-TT---AGAG-GA-A
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_97021                    1856 13 -      4736 T---------------------------A-C-A-TT---GGAG-GA-A
i Uropsilus_gracilis.UroGra_scaffold_97021               C 0 C 0
s Ursus_maritimus.KK499267.1                               4846856 14 -   5085361 T---------------------------A-CAG-TT---AGAG-GA-A
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368329 13 -   5488506 T---------------------------A-C-C-TT---AGAG-GA-A
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7333 14 -     43706 T---------------------------A-CAA-TT---ATAG-GA-A
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19662 13 -     24430 T---------------------------A-C-A-TT---AAAG-GA-A
i Xerus_inauris.XerIna_scaffold_48378                    C 0 I 9
s Zalophus_californianus.ZalCal_flattened_line_63728          1781 14 +      2932 T---------------------------A-CAA-TT---AGAG-GA-A
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9939 13 +     63895 C---------------------------A-T-A-TT---AGAG-AA-A
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 9
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11317 13 +     12536 T---------------------------A-C-A-TT---AGAG-GA-A
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   1874 68 +      8208 T
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Papio_papio.k141_802527                                     3591 59 +     27711 T
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    15418  9 -    145209 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            4816 68 -      6351 T
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1000 15 +     62944 CTCT--A---------------------------TAA-TG---A---------ATCA
s Acinonyx_jubatus.LLWD01001279.1                           823244 22 -   1699592 CTCT--A---------------------------CTAATT---ATG-CT-GA-ATCG
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506935 22 -  29979442 CTCT--A---------------------------CAAGTT---ATG-CT-Ga-atag
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             75159 22 -    347723 CTCT--A---------------------------CAAATT---ATG-CT-GA-ATAG
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64947 13 -     89534 --------------------------------------TG---ATG-CC-AA-ATTG
i Allactaga_bullata.AllBul_scaffold_9566                 I 9 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9265 16 -     52922 CTGT--A---------------------------TAGATG---A---------ATCA
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9192 16 -     28001 CTGT--A---------------------------TAGATG---A---------ATCA
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9318 16 -      9772 CTGT--A---------------------------TAGATG---A---------ATCA
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            475 16 -     12518 CTGT--A---------------------------TAGATG---A---------ATCA
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675109 22 -   2318259 CTCT--A---------------------------CAACTC---ACA-CT-GA-ATCA
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183058 22 +    412891 CTCC--A---------------------------TCAATG---ACA-CA-GC-ATCA
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97561 22 -    100397 CCCT--A---------------------------TAACTC---ACA-CT-GA-ATCA
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7227 13 +     20879 --------------------------------------TG---ATG-CT-CA-ATTG
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 9 C 0
s Arctocebus_calabarensis.k141_288239                        14396 22 +     17124 CTCT--G---------------------------TCAATG---CTG-TT-GA-ATAG
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2410 22 +     43469 CTCC--G---------------------------TCAATT---ACA-CA-GC-ATCA
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  49260 17 -     92717 ----------------------------------TAAATG---GTA-CT-GG-ATCG
i Avahi_laniger.k141_765380                              I 2 C 0
s Avahi_peyrierasi.k141_1424874                              49885 17 +     85213 ----------------------------------TAAATG---GTA-CT-GG-ATCG
i Avahi_peyrierasi.k141_1424874                          I 2 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191494 22 +  23207421 CTCT--A---------------------------TAAATT---ACA-CT-GA-ATCA
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         1960 22 -     18090 CTCT--A---------------------------TAAATT---ACA-CT-GA-ATCA
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26031 22 +     34529 CTCT--A---------------------------CAACTC---ACA-CT-GA-ATCA
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    199070 22 -    288883 CTCT--A---------------------------TAACTC---ACA-CT-GA-ATCA
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20272275 22 +  48749331 CTCT--A---------------------------TAACTC---ACA-CT-GA-NTCA
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1124835 22 -   1948126 CTCT--A---------------------------TAACTC---ACA-CT-GA-ATCA
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18082913 22 +  45695690 CTCT--A---------------------------TAACTC---ACA-CT-GA-ATCA
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2818402 22 +   4408762 CTCT--A---------------------------TAACTC---ACA-CT-GA-ATCA
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998853 22 -  17673402 CTCC--G---------------------------TAACTT---ATG-CC-AA-ATCA
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331317 22 -   7040546 CTCC--G---------------------------TAACTT---ATG-CC-AA-ATCA
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399593 22 -   1652518 CTCC--G---------------------------TAACTT---ATG-CC-AA-ATCA
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795723 22 -  60362399 CTCT--A---------------------------CAAATT---ATG-CT-CA-ATTG
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181780 22 -    185531 CTCT--A---------------------------CAAATT---ATG-CT-CA-ATTG
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031167 22 -   9314153 CTCT--A---------------------------CAAATT---ATG-CT-CA-ATTG
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955431 22 -  59632846 CTCT--A---------------------------CAAATT---ATG-CT-CA-ATTG
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496732 22 +  63665305 CTCT--A---------------------------CAAATT---ATG-CT-CA-ATTG
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18829227 22 +  46296322 CTCT--A---------------------------CAACTC---ACA-CT-GA-GCCA
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18059947 22 -  44709034 CTCT--A---------------------------CAACTC---ACA-CT-GA-GCCA
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           140990 22 -    496798 ttca--a---------------------------caaatg---atg-cc-ga-atgg
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2828 22 -     11696 CTCC--A---------------------------TCAATT---ACA-CA-GC-ATCA
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133603 13 +    179628 --------------------------------------CA---ATG-CT-GA-GTTG
i Castor_canadensis.CasCan_scaffold_2074                 I 7 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89160 22 +    217609 ATCT--A---------------------------TAAATT---ACA-CT-GG-AATG
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 41
s Cavia_aperea.AVPZ01000300.1                             18347424 12 -  23392119 --------------------------------------TT---A-G-CT-AA-CTTG
i Cavia_aperea.AVPZ01000300.1                            I 9 C 0
s Cavia_porcellus.DS562891.1                              18359684 12 -  23407841 --------------------------------------TT---A-G-CT-AA-CTTG
i Cavia_porcellus.DS562891.1                             I 9 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98559 12 +    143979 --------------------------------------TT---A-G-CT-AA-CTTG
i Cavia_tschudii.CavTsc_scaffold_8919                    I 9 C 0
s Cephalopachus_bancanus.k141_2037105                         4906 22 -      8605 TTCA--A---------------------------CAAATG---ATG-CC-GA-ATGG
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227826 22 +  27778364 CTCT--A---------------------------TAAATT---ACA-CC-GA-atca
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2544 22 -      3715 CTCT--A---------------------------TAAATT---ACA-CC-GA-ATCA
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470236 16 +   4669795 CTGT--A---------------------------TAGATG---A---------ATCA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8785 16 -     19203 CTGT--A---------------------------TAGATG---A---------ATCA
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3204 16 +      8260 CTGT--A---------------------------TAGATG---A---------ATCA
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3434 16 +     27781 CTGT--A---------------------------TAGATG---A---------ATCA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3580 16 -     20310 CTGT--A---------------------------TAGATG---A---------ATCA
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6564 16 +     29689 CTGT--A---------------------------TAGATG---A---------ATCA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             917 16 +      9989 CTGT--A---------------------------TAGATG---A---------ATCA
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9252 16 -     27936 CTGT--A---------------------------TAGATG---A---------ATCA
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9271 16 -     11289 CTGT--A---------------------------TAGATG---A---------ATCA
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811647 16 +  39242232 CTGT--A---------------------------TAGATG---A---------ATCA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217338 16 -  21565898 CTGT--A---------------------------TAGATG---A---------ATCA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34458 16 -     53127 CTGT--A---------------------------TAGATG---A---------ATCA
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1750 16 +      7159 CTGT--A---------------------------TAGATG---A---------ATCA
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9263 16 -     27947 CTGT--A---------------------------TAGATG---A---------ATCA
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9239 16 +     17596 CTGT--A---------------------------TAGATG---A---------ATCA
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39733 16 -     41420 CTGT--A---------------------------TAGATG---A---------ATCA
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4748 22 -      6351 CGTG--G---------------------------CAAATG---ATG-CT-GA-ATCA
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       T 68 C 0
s Cheirogaleus_major.k141_333249                             16679 16 -     52598 ----------------------------------TAAATG---GTG-CT-GA-ACT-
i Cheirogaleus_major.k141_333249                         I 2 C 0
s Cheirogaleus_medius.k141_1055463                           12028 16 +     57038 ----------------------------------TAAATG---GTG-CT-GA-ACT-
i Cheirogaleus_medius.k141_1055463                       I 2 C 0
s Chinchilla_lanigera.JH722012.1                           1248456 13 +   2543920 --------------------------------------TG---ATG-CT-AA-ATTG
i Chinchilla_lanigera.JH722012.1                         I 9 C 0
s Chlorocebus_aethiops.ctg25                              18423202 16 -  18827391 CTGT--A---------------------------TAGATG---A---------ATCA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9645 16 -     50209 CTGT--A---------------------------TAGATG---A---------ATCA
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416650 16 + 135778131 CTGT--A---------------------------TAGATG---A---------ATCA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15105 22 +     19366 CTTG--A---------------------------TAAATG---ATG-CT-GA-ATCA
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170204 22 +    839153 CTTG--A---------------------------TAAATG---ATG-CT-GA-atca
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1905179 16 +   2368649 CTGT--A---------------------------TAGATG---A---------ATCG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944824 43 + 200372422 CTGT--ATACACCTGCTGTGTTAGAGGAACTGTACAGATG---A---------ATCG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31718 16 +     84244 CTGT--A---------------------------TAGATG---A---------ATCG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545935 22 -  53390261 CTTT--A---------------------------GGAATT---ATG-CT-GC-ATCA
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10447 22 -     20389 CTCT--A---------------------------TGAATT---AAG-CA-GA-ATCA
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_287352               333  9 +      4208 CTCCTTG---------------------------TA---------------------
i Crocidura_indochinensis.CroInd_scaffold_287352         I 1 I 18
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24189 22 -     87169 TTCT--A---------------------------CTAATT---ATG-CT-GA-ATCG
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2808 13 +      5455 --------------------------------------TG---ATG-CT-AA-ATTG
i Cuniculus_paca.CunPac_flattened_line_231100            I 9 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1191 13 +      3576 --------------------------------------TG---ATG-CT-AA-ATTG
i Dasyprocta_punctata.DasPun_flattened_line_206793       I 9 C 0
s Dasypus_novemcinctus.JH564415.1                            61018 22 +   2246927 TGTG--A---------------------------TAAATG---ATG-CC-GA-atca
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532843 22 -  12879189 CTCT--G---------------------------TAAATG---GTG-TT-GA-ACTG
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811130 22 +  35494412 CTCT--A---------------------------TAAATT---ACG-CC-GA-ATCA
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8627859 22 +  20541912 CTCC--A---------------------------TTAATT---A-GACA-GC-ATCA
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669359 22 +   1390856 CTCT--A---------------------------TAAATT---ACA-CT-GA-ATCG
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2434 22 +    198055 ATCT--A---------------------------TAAATT---ACA-CC-GA-ATCA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34234 13 +     67921 --------------------------------------TG---ATG-CT-AA-ATTG
i Dinomys_branickii.DinBra_scaffold_21862                I 9 C 0
s Dipodomys_ordii.KN672350.1                              18895764 13 +  37912305 --------------------------------------tg---ttt-ct-cC-ATTG
i Dipodomys_ordii.KN672350.1                             I 9 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  11974 13 +     14536 --------------------------------------TG---TTT-CT-TC-ATTG
i Dipodomys_stephensi.DipSte_scaffold_75855              I 9 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31448 13 -     42551 --------------------------------------CT---ATG-CT-AA-ATTG
i Dolichotis_patagonum.DolPat_scaffold_30833             I 9 C 0
s Eidolon_helvum.KE759718.1                                   7366 21 +     11740 CTCT--A---------------------------TAAATT---A-C-CA-GA-AGCA
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310231 22 +    607251 CTCT--A---------------------------TAACTC---ACA-CT-GA-ATCA
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1088954 22 +  10337057 CTCG--A---------------------------TAAATG---GTA-CT-GA-AGTG
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16325721 22 -  41312741 CTCT--A---------------------------CAAATT---ATG-CT-CA-GTCG
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144016 22 -  14770903 ATCT--A---------------------------TAAATT---ACA-CA-GA-ATCA
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279701 22 +   4378816 CTCT--A---------------------------CAAATT---ACA-CT-GA-ATCA
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527522 22 -  39960074 CTCT--A---------------------------CAAATT---ACA-CT-GA-ATCA
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29537 22 +    498745 CTCT--A---------------------------CAAATT---ACA-CT-GA-ATCA
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3325291 22 -   7059049 TGT-T-A---------------------------CAAATT---ATG-CT-GA-ATAA
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21199881 16 -  21539334 CTGT--A---------------------------TAGATG---A---------ATCA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10806 22 +    133382 CTCT--A---------------------------TAAATT---ACA-CT-GA-ATCA
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24743 22 -     44125 CTCT--A---------------------------TAAATT---ACA-CT-GA-ATCA
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.AANG03299807.1                                   366 22 -       507 CTCT--A---------------------------CTAATT---ATG-CT-GA-ATCG
i Felis_catus.AANG03299807.1                             C 0 C 0
s Felis_catus_fca126.CM031415.1                           20191944 22 + 205367284 CTCT--A---------------------------CTAATT---ATG-CT-GA-ATCG
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  5469 22 -     36744 CTCT--A---------------------------CTAATT---ATG-CT-GA-ATCA
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             848458 13 +   3816255 --------------------------------------TG---ATG-CT-GG-ATTG
i Fukomys_damarensis.KN121974.1                          I 9 C 0
s Galagoides_demidoff.k141_31856                              3156 25 -      3432 cact--t---------------------------tagatgcctata-tt-ca-aaaa
i Galagoides_demidoff.k141_31856                         I 7 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25413 22 +     26054 CTCT--G---------------------------TGAATG---ATG-CT-GA-ACTG
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30312 13 +     49224 --------------------------------------TG---ATG-CT-GA-ATTT
i Glis_glis.GliGli_scaffold_19807                        I 8 C 0
s Gorilla_beringei.k141_2022027                               1720 16 +      3305 CTCT--A---------------------------TAAATG---A---------ATCA
i Gorilla_beringei.k141_2022027                          T 176 I 209
s Gorilla_gorilla.LT578341.1                             186332520 16 + 186649187 CTCT--A---------------------------TAAATG---A---------ATCA
i Gorilla_gorilla.LT578341.1                             I 13 I 18
s Graphiurus_murinus.GraMur_scaffold_10447                   30040 13 +     78134 --------------------------------------TG---ATG-CT-CA-ATTG
i Graphiurus_murinus.GraMur_scaffold_10447               I 8 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238106 22 +    327341 CTCT--G---------------------------TTAATT---ATG-CT-GA-ATCG
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17431 22 +     36099 CTCT--A---------------------------CAACTC---ACA-CT-GA-ACCA
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20659337 13 +  22651954 --------------------------------------TG---ATG-CT-GA-CTTG
i Heterocephalus_glaber.JH602082.1                       I 9 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 191 22 +       961 CTCT--G---------------------------TGAAGG---A-C-CTTGC-ATTG
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111995 13 +    128679 --------------------------------------TT---ACG-CT-GA-ATCG
i Hippopotamus_amphibius.HipAmp_scaffold_9076            I 9 C 0
s Hipposideros_armiger.JXIK01000431.1                       108333 13 +   1711038 --------------------------------------TT---ATG-CA-GA-ATCA
i Hipposideros_armiger.JXIK01000431.1                    I 8 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39774 13 +     43066 --------------------------------------TT---ATG-CA-GA-ATCA
i Hipposideros_galeritus.HipGal_scaffold_29171           I 8 C 0
s Hoolock_leuconedys.ctg274                                    429209 16 +    630532 CTCT--A---------------------------CAAATG---A---------ATCA
i Hoolock_leuconedys.ctg274                                 C 0 I 203
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40571 22 +     55795 CTCT--A---------------------------CTAATT---ATG-CT-GA-ATTG
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19806 13 -    143317 --------------------------------------CT---CTG-CT-AA-ATTG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 9 C 0
s Hylobates_agilis.k141_307679                               12333  8 -     15490 CTCT--A---------------------------TAA--------------------
i Hylobates_agilis.k141_307679                           I 206 I 7
s Hylobates_klossii.k141_282416                              54132 16 +     67168 CTCT--A---------------------------CAAATG---A---------ATCA
i Hylobates_klossii.k141_282416                          C 0 I 205
s Hylobates_pileatus_b.LG02                                     189537785 15 - 191637585 CTCT--A---------------------------TAA-TG---A---------ATCA
i Hylobates_pileatus_b.LG02                                     C 0 I 205
s Hylobates_pileatus_a.tarseq_633                            3330677 16 -  11177569 CTCT--A---------------------------CAAATG---A---------ATCA
i Hylobates_pileatus_a.tarseq_633                          C 0 I 205
s Hystrix_cristata.HysCri_scaffold_5660                      80880 13 +    135385 --------------------------------------TA---ATG-CT-GC-ATTG
i Hystrix_cristata.HysCri_scaffold_5660                  I 9 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514547 13 -   7955117 --------------------------------------TG---ATG-CT-GA-ATTg
i Ictidomys_tridecemlineatus.JH393364.1                  I 9 C 0
s Indri_indri.k141_3655594                                   18115 22 +     31101 CTCT--G---------------------------TAAATG---GTG-CT-GG-ATTG
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22347 22 +     23964 CTCT--A---------------------------TAAATT---ACG-CT-GA-ATCA
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271327 13 -   9596543 --------------------------------------TG---ATG-CC-AA-ATTG
i Jaculus_jaculus.JH725527.1                             I 9 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1614 22 -      3359 CTCT--A---------------------------TAAATT---ACG-CT-GA-ATCA
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_50988                    11881 22 +     29960 TTCT--A---------------------------TAAATG---ACA-CA-GA-ATCA
i Lasiurus_borealis.LasBor_scaffold_50988                I 16 T 22
s Lepilemur_ankaranensis.k141_596936                          6754 17 -     23766 ----------------------------------TAAATG---GTG-CT-GA-ATTG
i Lepilemur_ankaranensis.k141_596936                     I 5 C 0
s Lepilemur_dorsalis.k141_577674                             24701 17 +     45836 ----------------------------------TAAATG---GTG-CT-GA-ATTG
i Lepilemur_dorsalis.k141_577674                         I 5 C 0
s Lepilemur_ruficaudatus.k141_420445                         31612 17 -     32627 ----------------------------------TAAATG---GTG-CT-GA-ATTG
i Lepilemur_ruficaudatus.k141_420445                     I 5 C 0
s Lepilemur_septentrionalis.k141_185316                      22756 17 +     54090 ----------------------------------TAAATG---GTG-CT-GA-ATTG
i Lepilemur_septentrionalis.k141_185316                  I 5 C 0
s Leptonychotes_weddellii.KB714746.1                       3036054 22 +   3914936 CTCT--A---------------------------CAAATT---ATG-CT-ga-attg
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             267425 22 -    662738 CTCT--A---------------------------TAAATT---ATG-CC-GA-ATCA
i Lipotes_vexillifer.KE559953.1                          I 2 C 0
s Lophocebus_aterrimus.ctg367                              1431406 16 +   1826925 CTGT--A---------------------------CAGATG---A---------ATCA
i Lophocebus_aterrimus.ctg367                            C 0 I 373
s Loris_lydekkerianus.k141_2539221                             648 20 +     11245 CTCT--G---------------------------TCAATG---GTG-TT-GA-AT--
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999484 20 +   6120653 CTCT--G---------------------------TCAATG---GTG-TT-GA-AT--
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214464 22 -  43346337 CTCT--G---------------------------TAAAGG---ACA-CT--ACATTG
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951671 22 -  59628241 CTCT--A---------------------------CAAATT---ATG-CT-CA-ATTG
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               1591 16 +     40492 CTGT--G---------------------------TAGATG---A---------ATCA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670851 16 +  60120075 CTGT--G---------------------------TAGACG---A---------ATCA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7349 16 -     26193 CTGT--G---------------------------TAGATG---A---------ATCA
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75143 16 -    114318 CTGT--A---------------------------TAGATG---A---------ATCA
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   862 16 -     23192 CTGT--A---------------------------TAGATG---A---------ATCA
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10315 16 -     29190 CTGT--A---------------------------TAGATG---A---------ATCA
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18882 16 +     37952 CTGT--A---------------------------TAGATG---A---------ATCA
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833970 16 + 187317192 CTGT--G---------------------------TAGACG---A---------ATCA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452531 16 -  25927173 CTGT--A---------------------------TAGATG---A---------ATCA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74731 16 +     89720 CTGT--A---------------------------TAGATG---A---------ATCA
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1728 16 +     20474 CTGT--G---------------------------TAGACG---A---------ATCA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1529 16 -     14993 CTGT--A---------------------------TAGATG---A---------ATCA
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324402 16 -    668171 CTGT--A---------------------------TAGATG---A---------ATCA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15671 16 -     15935 CTGT--G---------------------------TAGACG---A---------ATCA
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20468 16 -     45290 CTGT--A---------------------------TAGATG---A---------ATCA
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87512 21 +     94391 CTCT--A---------------------------TAAATT---A---CTAGA-AGCA
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23932023 16 -  24302211 CTGT--A---------------------------CAGATG---A---------ATCA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346201 16 +    752769 CTGT--A---------------------------CAGATG---A---------ATCA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15562 16 +    737560 -----------------------------------AAAAT---ATG-Ct-ga-attg
i Manis_javanica.JSZB01003497.1                          I 4 C 0
s Manis_pentadactyla.KN006162.1                              46951 16 -    317179 -----------------------------------AAACT---ATG-CT-ga-attg
i Manis_pentadactyla.KN006162.1                          I 4 C 0
s Marmota_marmota.CZRN01000018.1                          33097397 13 -  40650429 --------------------------------------TG---ATG-CT-GA-atta
i Marmota_marmota.CZRN01000018.1                         I 9 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6744  4 -    207569 -----------------------------------------------------ATCA
i Megaderma_lyra.MegLyr_scaffold_4542                    I 5 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6185 22 +     13704 CTCT--A---------------------------CAAATT---ATG-CT-GA-TTCA
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3015 22 +     10310 CTCT--A---------------------------TAAATT---ATG-CC-GA-ATCA
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18283280 17 -  93316391 ----------------------------------TACATG---GTG-CT-GA-ATTG
i Microcebus_murinus.CM007674.1                          I 5 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13370 22 -     19307 CTCC--A---------------------------TCAATC---ACA-CA-GC-ATCA
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849044 22 +   8254450 CTCT--A---------------------------TAAGCT---ACa-ca-ga-atca
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32920 22 +     64694 CTCT--T---------------------------TAAGCT---ACA-CA-GA-ATCA
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3758 16 -     28506 CTGT--A---------------------------TAGATG---A---------ATCA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62384 22 -     63350 CTCT--A---------------------------CAAATT---ATG-CT-GA-ATTG
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      4635 17 -     37649 ----------------------------------TACATG---GTG-CT-GA-ATTG
i Mirza_zaza.k141_952172                                 I 5 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26520 22 -    437263 CTCT--A---------------------------TAAATT---ACG-CC-GA-ATCA
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137776 22 -    366855 CTCC--A---------------------------TCAATT---ATA-CA-GC-ATCA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_61429                  27371 22 -     27816 CTCT--A---------------------------TAACTC---ACA-CT-GA-ATCA
i Moschus_moschiferus.MosMos_scaffold_61429              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31307 22 +     37127 CTCT--A---------------------------CTAATT---ATG-CT-GA-ATCG
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5070 22 +     14753 ATCT--A---------------------------TAAACT---ACA-CA-GA-ATCA
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2305 13 +     14296 --------------------------------------TG---GTG-CT-GA-ATTT
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 8 C 0
s Mustela_putorius.JH418006.1                               297616 22 -  14710649 CTCT--A---------------------------CAAATT---ATG-CT-GA-ATCG
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                278244 18 -  10118263 ------A---------------------------TAAATT---ACA-CA-GA-ATCA
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585801 18 -   6019432 ------A---------------------------TAAATT---ATA-CA-GA-ATCA
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902010 18 -   4330536 ------A---------------------------TAAATT---ACA-CA-GA-ATCA
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32569 18 +     33610 ------A---------------------------TAAATT---ACA-CA-GA-ATCA
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186056 22 +    196477 CATG--A---------------------------TAATTG---ATA-CT-GG-ATCA
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025468 13 -   3037898 --------------------------------------TG---ATG-CT-GA-ATTG
i Nannospalax_galili.KL204047.1                          I 9 C 0
s Nasalis_larvatus.k141_413338                                9771 16 +     21681 CTGT--A---------------------------TAGATG---A---------ATCA
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865476 22 +   7148211 CTCT--A---------------------------TAAATT---ACG-CC-GA-ATCA
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756340 22 +    783361 CTCC--A---------------------------TAACTT---ACA-CA-CC-AGCA
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145932 22 -   9404916 CTCT--A---------------------------CAAATT---ATG-CT-CA-ATCG
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102574452 20 - 196305487 CTCT--G---------------------------TCAATG---GTG-TT-GA-AT--
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2138 20 +      8486 CTCT--G---------------------------TCAATG---GTG-TT-GA-AT--
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744879 20 + 199412804 CTCT--G---------------------------TCAATG---GTG-TT-GA-AT--
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355711 22 +   3988456 CACA--T---------------------------TAAAAG---ATG-CT-GA-TGTA
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              500673 22 -   2017862 CTCT--A---------------------------CAAAAA---ATG-Ct-ga-atca
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         144609 16 +    630418 -----------------------------------AACTC---ACA-CT-GA-ATCA
i Odocoileus_virginianus.KZ100018.1                      I 5 C 0
s Orcinus_orca.KB316932.1                                  2781391 22 -  10937097 CTCT--A---------------------------TAAATT---ACG-CC-AA-ATCA
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6789 22 -     18566 CTCT--A---------------------------TAAATG---ATA-TT-GA-AATG
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458686 22 -    559221 CTCT--A---------------------------CAAATT---ATG-CT-CA-ATTG
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17584962 22 +  44047080 CTCT--A---------------------------CAACTC---ACA-CT-GA-ACCA
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173383 22 -    191736 CTCT--A---------------------------CAACTC---ACA-CT-GA-ACCA
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    38559 15 +     80009 ctct--a---------------------------taa-tg---a---------atca
i Pan_paniscus.KQ411613.1                                I 2405 T 2404
s Pan_troglodytes.CM009242.2                             189137314 16 + 189151597 ctct--a---------------------------taaatg---a---------atca
i Pan_troglodytes.CM009242.2                             n 0 n 0
s Panthera_onca.PanOnc_flattened_line_3271                  147091 22 +    230217 CTCT--A---------------------------CTAATT---ATG-CT-GT-ATCG
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                259800 22 +  18783137 CTCT--A---------------------------CTAATT---ATG-CT-GT-ATCG
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4716947 22 -   8748460 CTCT--A---------------------------CTAATT---ATG-CT-GT-ATCG
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1264316 22 -   2937107 CTCT--A---------------------------CAACTC---ACA-CT-GA-ATCA
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183437345 16 + 183742232 CTGT--A---------------------------TAGATG---A---------ATCA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1503 16 +     20448 CTGT--A---------------------------TAGATG---A---------ATCA
i Papio_cynocephalus.k141_4307930                        I 93 C 0
s Papio_hamadryas.Contig39                                20558308 16 +  20919399 CTGT--A---------------------------TAGATG---A---------ATCA
i Papio_hamadryas.Contig39                               I 279 T 279
s Papio_kindae.k141_1936966                                    246 16 +     41871 CTGT--A---------------------------TAGATG---A---------ATCA
i Papio_kindae.k141_1936966                              I 93 C 0
s Papio_papio.k141_802527                                     3532 16 +     27711 CTGT--A---------------------------TAGATG---A---------ATCA
i Papio_papio.k141_802527                                T 59 C 0
s Papio_ursinus.k141_3428135                                  3431 16 +      9205 CTGT--G---------------------------TAGGTG---A---------ATCA
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8826 22 -     78924 TTCT--A---------------------------CCAATT---ATG-CT-GA-ATCG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            4629 22 +     13100 CTCT--G---------------------------TCAATG---CTG-TT-GA-ATCG
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             2997 22 +     25941 CTCT--G---------------------------TCAATG---CTG-TT-GA-ATCG
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25805 13 -     29689 --------------------------------------TA---ATG-CT-GA-ACTG
i Petromus_typicus.PetTyp_scaffold_42190                 I 9 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25312  4 +     32600 TGCT-----------------------------------------------------
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 T 19
s Phocoena_phocoena.PhoPho_flattened_line_24159               8438 22 +     63832 CTCT--A---------------------------TAAATT---ACG-CC-GA-ATCA
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38287 16 +     62158 CTGT--A---------------------------TAGATG---A---------ATCA
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33014 16 +     89929 CTGT--A---------------------------TAGATG---A---------ATCA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34430 16 +     51399 CTGT--A---------------------------TAGATG---A---------ATCA
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290651 16 -  14605196 CTGT--A---------------------------TAGATG---A---------ATCA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              390 22 +     22620 ATCT--A---------------------------TAAATT---ACA-CA-GA-ATCC
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34144 22 +     35617 CTCT--A---------------------------TAAGTT---ATG-CT-GA-ATCA
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189125499 16 + 189387572 CTCT--A---------------------------TAAATG---A---------ATCA
i Pongo_abelii.CM009266.2                                T 206 C 0
s Pongo_pygmaeus.ctg66                                     9565103 15 +   9816681 CTCT--A---------------------------TGA-TG---A---------ATCA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               67931 16 -     81375 CTGT--A---------------------------TAGATG---A---------ATCA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9758 16 +     10147 CTGT--A---------------------------TAGATG---A---------ATCA
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9952 22 -     22811 CTCT--G---------------------------TGAAGG---A-C-CT-TACATTG
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986331 17 +   2598838 ----------------------------------TAAATA---GTG-CT-GG-ATTG
i Propithecus_coquerelli.NW_012148875.1                  I 2 C 0
s Propithecus_coronatus.k141_347390                          24620 17 +     38485 ----------------------------------TAAATG---GTG-CT-GG-ATTG
i Propithecus_coronatus.k141_347390                      I 2 C 0
s Propithecus_diadema.k141_357118                              781 17 +      4256 ----------------------------------TAAATG---GTG-CT-GG-ATTG
i Propithecus_diadema.k141_357118                        I 2 C 0
s Propithecus_edwardsi.k141_1176054                          22139 17 +     35766 ----------------------------------TAAATG---GTG-CT-GG-ATTG
i Propithecus_edwardsi.k141_1176054                      I 2 C 0
s Propithecus_perrieri.k141_1200571                            322 17 -     24134 ----------------------------------TAAATG---GTG-CT-GG-ATTG
i Propithecus_perrieri.k141_1200571                      I 2 C 0
s Propithecus_tattersalli.k141_790011                        24134 17 -     67325 ----------------------------------TAAATG---GTG-CT-GG-ATTG
i Propithecus_tattersalli.k141_790011                    I 2 C 0
s Propithecus_verreauxi.k141_956661                            379 17 -      6182 ----------------------------------TAAATG---GTG-CT-GG-ATTG
i Propithecus_verreauxi.k141_956661                      I 2 C 0
s Pteronotus_parnellii.KE909381.1                            11158 22 -     21811 CTCC--A---------------------------TCAATT---ACA-CA-GC-ATCA
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36627 22 +     42204 CTCC--A---------------------------CAAATT---ATG-CT-GA-ATCG
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973635 21 +  28871421 CTCT--A---------------------------TAAATT---A-C-CA-GA-AGCT
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1572 21 -      8028 CTCT--A---------------------------TAAATT---A-C-CA-GA-AGCT
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20270258 22 -  38429054 CTCT--A---------------------------CTAATT---ATG-CT-GA-ATTG
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                              9760 16 -     91421 CTGT--A---------------------------TAGATG---A---------ATCA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603894 16 +   7812017 CTGT--A---------------------------TAGATG---A---------ATCA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9733 16 -     72585 CTGT--A---------------------------TAGATG---A---------ATCA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4857 16 +     55207 -----------------------------------AACTC---ACA-CT-GA-ATCA
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 5 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        366869 22 -   3329780 CTCT--A---------------------------CAAATT---ACa-ca-ga-atca
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             1146 16 -     11128 CTGT--A---------------------------TAGATG---G---------ATCA
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230523 16 - 195417433 CTGT--A---------------------------TAGATG---G---------ATCA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7666231 16 +   7961872 CTGT--A---------------------------TAGATG---G---------ATCA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84621 21 -     96226 CTCT--A---------------------------TAAATT---A-C-CA-GA-AGCA
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3504 22 +      4321 CTCT--A---------------------------CAACTC---ACA-CT-GA-ATCA
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151349 10 -    313613 CTCT--A---------------------------GAAAT------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          14275 16 -     19888 CTGT--A---------------------------TAGATG---A---------ATCA
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21480 16 +     39453 CTGT--A---------------------------TAGATG---A---------ATCA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2004 16 +     27826 CTGT--A---------------------------TAGATG---A---------ATCA
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1526 16 -     19483 CTGT--A---------------------------TAGATG---A---------ATCA
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1588 16 +      7198 CTGT--A---------------------------TAGATG---A---------ATCA
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9848 16 +     15514 CTGT--A---------------------------TAGATG---A---------ATCA
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187641 22 -    191337 CTCC--A---------------------------TAAAGT---ATG-CT-GA-ATAG
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13646980 14 -  18376816 AACCTCA---------------------------TACATT---A-------------
i Sorex_araneus.JH798187.1                               I 1 I 3
s Spermophilus_dauricus.KZ294078.1                         1948189 13 -   3870691 --------------------------------------TG---ATG-CT-ga-atga
i Spermophilus_dauricus.KZ294078.1                       I 9 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27169 22 +     97271 CTCT--A---------------------------CGAATT---ATG-CT-GA-ACCG
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14176 22 -    196729 CTCT--A---------------------------CTAATT---ACG-CT-GA-GTCA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   62882423  7 -  69701581 GTCT--A---------------------------CA---------------------
i Sus_scrofa.CM000828.4                                  C 0 I 2
s Symphalangus_syndactylus.tarseq_199                      1087824 16 -   1523678 CTCT--A---------------------------CAAATG---A---------ATCA
i Symphalangus_syndactylus.tarseq_199                    T 207 I 206
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6773 22 +     41958 CTCT--A---------------------------TAAATT---ACG-C--AACATCA
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69418 22 +    116680 CATG--A---------------------------TAATTG---ATA-CT-GG-ATCA
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115156 22 -    156842 CTCT--A---------------------------TGAATT---ACA-CT-GA-ATCA
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383611 22 +    539355 CTCT--A---------------------------TAAATT---ACA-CT-GA-ATCA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10605 22 +     70052 TTCA--A---------------------------CAAATG---ATG-CC-GA-ATGG
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               14910 22 +     25099 TTCA--A---------------------------CAAATG---ATG-CC-GA-ATGG
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422854 16 + 186847797 CTGT--A---------------------------TAGATG---A---------ATCA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103146 13 +    114563 --------------------------------------TA---ATA-CT-CA-ACTG
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 9 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   1806 22 +      8208 CATG--G---------------------------TAAACG---ATG-CT-GA-ATCA
i Tolypeutes_matacus.TolMat_scaffold_228639              T 68 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78914 22 +    610378 CTCC--A---------------------------TCAATT---ACA-CA-GC-ATCA
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          5585 16 -     20410 CTGT--A---------------------------TAGATG---A---------ATCA
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9777 16 +     15221 CTGT--A---------------------------TAGATG---A---------ATCA
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5685 16 +     19930 CTGT--A---------------------------TAGATG---A---------ATCA
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2112 16 -     19997 CTGT--A---------------------------TAGATG---A---------ATCA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42231 16 -     60166 CTGT--A---------------------------TAGATG---A---------ATCA
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9703 16 -     27529 CTGT--A---------------------------TAGATG---A---------ATCA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9643 16 -     18194 CTGT--A---------------------------TAGATG---A---------ATCA
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3379 16 -     21137 CTGT--A---------------------------TAGATG---A---------ATCA
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2081 16 -     10723 CTGT--A---------------------------TAGATG---A---------ATCA
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1234 16 +      9834 CTGT--A---------------------------TAGATG---A---------ATCA
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19552 16 +     32220 CTGT--A---------------------------TAGATG---A---------ATCA
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933649 16 +   6242583 CTGT--A---------------------------TAGATG---A---------ATCA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2894 16 +     20839 CTGT--A---------------------------TAGATG---A---------ATCA
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    632 11 -      1748 -------------------------------------------ACA-CT-GA-ATCA
i Tragulus_javanicus.TraJav_scaffold_140459              I 2 C 0
s Tupaia_chinensis.KB320699.1                              2149568 22 +   4065304 CTCC--A---------------------------TGAATG---ACG-CT-GA-ACTG
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     3169 12 -     10553 ---------------------------------------G---ACG-CT-GA-ACTG
i Tupaia_tana.TupTan_flattened_line_97126                I 9 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737638 22 +  33153633 CTCT--A---------------------------TAAATT---ATG-CC-AA-ATCA
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_97021                    1869 22 -      4736 CACA--C---------------------------GCAATT---ATG-CT-GA-ATGA
i Uropsilus_gracilis.UroGra_scaffold_97021               C 0 C 0
s Ursus_maritimus.KK499267.1                               4846870 22 -   5085361 CTCT--A---------------------------CAAATT---ATG-CT-GA-ATAG
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368342 22 -   5488506 CACC--G---------------------------TAACTT---ATG-CC-AA-ATCA
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7347 22 -     43706 CTCT--A---------------------------CAAATT---ATG-CT-CA-ATCG
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19684 13 -     24430 --------------------------------------TG---ATG-CC-AA-AGTG
i Xerus_inauris.XerIna_scaffold_48378                    I 9 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1795 22 +      2932 CTCT--A---------------------------CAAAAA---ATG-CT-GA-ATCG
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9961 13 +     63895 --------------------------------------TC---ATG-CC-AA-ATTG
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 9 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11330 22 +     12536 CTCT--A---------------------------TAAATT---ATT-CC-GA-ATCA
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    15418  9 -    145209 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1015 18 +     62944 CATGAAACA-GAAT-------GGTTC
s Acinonyx_jubatus.LLWD01001279.1                           823266 18 -   1699592 AATGAAATG-GAAT-------TGCCG
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506957 18 -  29979442 aatgaaatg-aaat-------tgctA
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             75181 18 -    347723 GATGAAATG-AAAT-------TGCTA
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64960 15 -     89534 AGTGGGGTA-GAAT-------TA---
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9281 18 -     52922 CATGAAATA-GAAT-------GGTTC
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9208 18 -     28001 CATGAAACA-GAAT-------GGTTC
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9334 18 -      9772 CATGAAATA-GAAT-------GGTTC
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            491 18 -     12518 CATGAAATA-GAAT-------GGTTC
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675131 18 -   2318259 AATAAAGTG-GAAT-------TGTTA
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183080 18 +    412891 CATGAAATA-GACT-------TGTTA
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97583 18 -    100397 AATAAAACA-GAAT-------TGTTA
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7240 15 +     20879 AGCAAAATG-GAAT-------CA---
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14418 18 +     17124 AATAAAATA-GAAT-------TGTTA
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2432 18 +     43469 CATGAAGTA-GAAT-------TGTTA
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  49277 18 -     92717 AATGAAATA-GAAT-------TGCTA
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              49902 18 +     85213 AATGAAATA-GAAT-------TGCTA
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191516 18 +  23207421 AATGAAATG-GAAT-------TGTTA
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         1982 18 -     18090 AATGAAATG-GAAT-------TGTTA
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26053 18 +     34529 AATAAAGTG-GAAT-------TGTTA
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    199092 18 -    288883 AATAAAATG-GAAT-------TGTTA
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20272297 18 +  48749331 AATAAAATG-GAAT-------TGTTA
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1124857 18 -   1948126 AATAAAATG-GAAT-------TGTTA
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18082935 18 +  45695690 AATAAAATG-GAAT-------TGTTA
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2818424 18 +   4408762 AATAAAATG-GAAT-------TGTTA
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998875 18 -  17673402 AATGAAGTG-GAGT-------TGTTA
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331339 18 -   7040546 AATGAAGTG-GAGT-------TGTTA
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399615 18 -   1652518 AATGAAGTG-GAGT-------TGTTA
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795745 18 -  60362399 AATGAAATT-AAAT-------TGCTA
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181802 18 -    185531 AATGAAATT-AAAT-------TGCTA
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031189 18 -   9314153 AATGAAATT-AAAT-------TGCTA
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955453 18 -  59632846 AATGAAATT-AAAT-------TGCTA
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496754 18 +  63665305 AATGAAATT-AAAT-------TGCTA
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18829249 18 +  46296322 AATCAAGTG-GAAT-------TGTTA
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18059969 18 -  44709034 AATCAAGTG-GAAT-------TGTTA
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           141012 18 -    496798 aatgaaata-taat-------tgtTG
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2850 18 -     11696 AATGAAATA-GAAT-------TGTTA
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133616 15 +    179628 AATGCAATG-GAAT-------TG---
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89223 18 +    217609 ACTGGAATG-GAAT-------TGTTG
i Catagonus_wagneri.CatWag_scaffold_2839                 I 41 C 0
s Cavia_aperea.AVPZ01000300.1                             18347436 20 -  23392119 AATGAGATA-GAATCACT-A-TG---
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18359696 20 -  23407841 AATGAGATA-GAATCACT-A-TG---
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98571 20 +    143979 AATGAGATA-GAATCATT-A-TG---
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         4928 18 -      8605 AATGAAATA-TAAT-------TGTTG
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227848 18 +  27778364 aatgaaata-gaat-------tatta
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2566 18 -      3715 AATGAAATA-GAAT-------TATTA
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470252 18 +   4669795 CATGAAATA-GAAT-------GGTTC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8801 18 -     19203 CATGAAATA-GAAT-------GGTTC
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3220 18 +      8260 CATGAAATA-GAAT-------GGTTC
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3450 18 +     27781 CATGAAATA-GAAT-------GGTTC
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3596 18 -     20310 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6580 18 +     29689 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             933 18 +      9989 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9268 18 -     27936 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9287 18 -     11289 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811663 18 +  39242232 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217354 18 -  21565898 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34474 18 -     53127 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1766 18 +      7159 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9279 18 -     27947 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9255 18 +     17596 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39749 18 -     41420 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4770 18 -      6351 GATGCAATG-AAAT-------TGCTG
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16695 18 -     52598 AATGAAACA-GAAT-------TGATA
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12044 18 +     57038 AATGAAATA-GAAT-------TGATA
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1248469 17 +   2543920 AATGAAATA-GAATGA-T----A---
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18423218 18 -  18827391 CATGAAACA-GAAT-------GGTTC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9661 18 -     50209 CATGAAACA-GAAT-------GGTTC
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416666 18 + 135778131 CATGAAATA-GAAT-------GGTTC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15127 18 +     19366 AATGGAATA-GAAT-------TGCTA
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170226 18 +    839153 aatggaata-gaat-------tgctA
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1905195 18 +   2368649 CATGAAATA-GAGT-------GGCCC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944867 16 + 200372422 CATGAAATA-G--T-------GGCTC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31734 18 +     84244 CATGAAATA-GAGT-------GGCCC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545957 18 -  53390261 AATGAAATG-GAAT-------TGCTG
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10469 15 -     20389 AGTGAAATG-AAAT-------TG---
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_109268              7529 13 +      9948 ---AAAGTA-TC---------TATGA
i Crocidura_indochinensis.CroInd_scaffold_109268         T 17 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24211 18 -     87169 AATGAAATG-GAAT-------TCCTA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2821 20 +      5455 AATGAAACA-GAATCA-TGA-TG---
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1204 20 +      3576 AATGAAATA-GAATCATT-A-CA---
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            61040 18 +   2246927 aatggaata-aaat-------tgctA
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532865 18 -  12879189 AATGAAAAA-GAAT-------TGTTA
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811152 18 +  35494412 AATGAAATG-GAAT-------TGTTA
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8627881 18 +  20541912 AATGAAATA-GAAT-------TGTTG
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669381 18 +   1390856 AATGAAATA-GAAT-------TATTA
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2456 18 +    198055 AATGAAATA-GAAT-------TACTA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34247 17 +     67921 AATGAAATA-GAATCA-T----G---
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18895777 15 +  37912305 GATGGAATG-GAAC-------TA---
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  11987 15 +     14536 GATGGAATG-GAAC-------TA---
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31461 20 -     42551 AATGAAATG-GAATCATT-A-CA---
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE759718.1                                   7387 18 +     11740 AATGAAATT-GAAG-------TGGTA
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310253 18 +    607251 AGTAAAATG-GAAC-------TGTTA
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1088976 18 +  10337057 AATGCAATG-GAAT-------TGCTG
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16325743 18 -  41312741 AATGAAATG-AAAC-------TGCTA
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144038 18 -  14770903 AATGAAATA-GAAT-------TGTTA
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279723 18 +   4378816 AATGGAATG-GAAT-------TGTTA
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527544 18 -  39960074 AATGAAATG-GAAT-------TGTTA
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29559 18 +    498745 AATGAAATG-GAAT-------TGTTA
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3325313 17 -   7059049 -ACAAAGTA-CTAT-------GGTCA
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21199897 18 -  21539334 CATGAAACA-GAAT-------GGTTC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10828 18 +    133382 AATGAAATG-GAAT-------TGTTA
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24765 18 -     44125 AATGAAATG-GAAT-------TGTTA
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.AANG03299807.1                                   388 18 -       507 AATGAAATG-GAAT-------TGCCA
i Felis_catus.AANG03299807.1                             C 0 C 0
s Felis_catus_fca126.CM031415.1                           20191966 18 + 205367284 AATGAAATG-GAAT-------TGCCA
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  5491 18 -     36744 AATGAAATG-GAAT-------TGCCA
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             848471 20 +   3816255 AATGGAATG-GAATCA-T-CGTA---
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galagoides_demidoff.k141_31856                              3181 18 -      3432 acaaaaata-gagc-------atatc
i Galagoides_demidoff.k141_31856                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25435 18 +     26054 AATGAAATA-GAAT-------TATTA
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30325 15 +     49224 AATGAAATG-GAAT-------TG---
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_2022027                               1945 18 +      3305 CATGAAACA-GAAT-------GGTTC
i Gorilla_beringei.k141_2022027                          I 209 T 18
s Gorilla_gorilla.CYUI03002401.1                              6238 18 +      7071 catgaaaca-gaat-------ggttc
i Gorilla_gorilla.CYUI03002401.1                         I 167 T 18
s Graphiurus_murinus.GraMur_scaffold_10447                   30053 15 +     78134 GATGAAATG-GAAT-------TA---
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238128 18 +    327341 AATGAAATG-GAAT-------TGCTA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17453 18 +     36099 AATAAAGTG-GAAT-------TGTTA
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20659350 20 +  22651954 AATGAAATT-GAATCATT-A-TA---
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 213 18 +       961 AACAGAATG-GACT-------TGCTG
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112008 18 +    128679 AATGAAATG-GAAT-------TGTTA
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108346 18 +   1711038 AAtgaaatg-gaat-------tgttt
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39787 18 +     43066 AATGAAATG-GAAT-------TGTTT
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    429428 18 +    630532 AATGAAACA-GAAT-------GGTTC
i Hoolock_leuconedys.ctg274                                 I 203 T 203
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40593 18 +     55795 AATGAAACT-GAAT-------TGCTA
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19819 20 -    143317 AATGAAATA-GAATCATT-A-TG---
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_307679                               12348 18 -     15490 CATGAAACA-GAAT-------GGTTC
i Hylobates_agilis.k141_307679                           I 7 T 205
s Hylobates_klossii.k141_282416                              54353 18 +     67168 CATGAAACA-GAAT-------GGTTC
i Hylobates_klossii.k141_282416                          I 205 T 205
s Hylobates_pileatus_b.LG02                                     189538005 18 - 191637585 CATGAAACA-GAAT-------GGTTC
i Hylobates_pileatus_b.LG02                                     I 205 T 205
s Hylobates_pileatus_a.tarseq_633                            3330898 18 -  11177569 CATGAAACA-GAAT-------GGTTC
i Hylobates_pileatus_a.tarseq_633                          I 205 T 205
s Hystrix_cristata.HysCri_scaffold_5660                      80893 20 +    135385 AATACAATA-GAATCA-TGA-TA---
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514560 15 -   7955117 agcaaaatg-aaat-------ca---
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   18137 18 +     31101 AATGAAATA-GAAT-------TGCCA
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22369 18 +     23964 AATGAAATG-GAAT-------TGTTA
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271340 15 -   9596543 AGTGGGAGA-GAAT-------TG---
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1636 18 -      3359 AATGAAATG-GAAT-------TGTTA
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    12217 18 -     42476 AATGAAATG-GAAT-------TGTTA
i Lasiurus_borealis.LasBor_scaffold_32767                I 22 C 0
s Lepilemur_ankaranensis.k141_596936                          6771 18 -     23766 AATGAAACA-GAAT-------TGCTA
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24718 18 +     45836 AATGAAACA-GAAT-------TGCTA
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31629 18 -     32627 AATGAAACA-GAAT-------TGCTA
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      22773 18 +     54090 AATGAAACA-GAAT-------TGCTA
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3036076 18 +   3914936 aataaaatg-aaat-------tgcta
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             267447 18 -    662738 AATGAAATG-GAAT-------TGTTA
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1431795 18 +   1826925 CATGAAATA-GAAT-------GGTTC
i Lophocebus_aterrimus.ctg367                            I 373 T 373
s Loris_lydekkerianus.k141_2539221                             668 15 +     11245 ---AAAACA-GAAT-------TGTTA
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999504 15 +   6120653 ---AAAACA-GAAT-------TGTTA
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214486 18 -  43346337 AATAGAAGG-GAAT-------TGCTA
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951693 18 -  59628241 AATGAAATT-AAAT-------TGCTA
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               1607 18 +     40492 CATGAAATA-GAAT-------GGTTC
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670867 18 +  60120075 CATGAAATA-GAAT-------GGTTC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7365 18 -     26193 CATGAAATA-GAAT-------GGTTC
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75159 18 -    114318 CATGAAATA-GAAT-------GGTTC
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   878 18 -     23192 CATGAAATA-GAAT-------GGTTC
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10331 18 -     29190 CATGAAATA-GAAT-------GGTTC
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18898 18 +     37952 CATGAAATA-GAAT-------GGTTC
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833986 18 + 187317192 CATGAAATA-GAAT-------GGTTC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452547 18 -  25927173 CATGAAATA-GAAT-------GGTTC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74747 18 +     89720 CATGAAATA-GAAT-------GGTTC
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1744 18 +     20474 CATGAAATA-GAAT-------GGTTC
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1545 18 -     14993 CATGAAATA-GAAT-------GGTTC
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324418 18 -    668171 CATGAAATA-GAAT-------GGTTC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15687 18 -     15935 CATGAAATA-GAAT-------GGTTC
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20484 18 -     45290 CATGAAATA-GAAT-------GGTTC
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87533 18 +     94391 AATGAAATT-GAAG-------TGGTA
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23932039 18 -  24302211 CATGAAATA-GAAA-------GGTTC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346217 18 +    752769 CATGAAATA-GAAA-------GGTTC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15578 18 +    737560 aatgaaatg-aaat-------tgttA
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              46967 18 -    317179 aatgaaatg-aaat-------tgttA
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097410 15 -  40650429 agcaaaatg-aaat-------ca---
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6748 18 -    207569 AATAAAATG-GAAT-------TGTTA
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6207 18 +     13704 AATGAAATG-AAAT-------TGTTA
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3037 18 +     10310 AATGAAATG-GAAT-------TGTAA
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18283297 18 -  93316391 AGTGAAATA-GAAT-------TGCTA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13392 18 -     19307 AATGAAATA-GAAT-------TGTTA
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849066 18 +   8254450 aataaaata-taat-------tgtta
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32942 18 +     64694 AATAAAATA-TAAT-------TGTCA
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3774 18 -     28506 CATGAAATA-GAAT-------GGTTC
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62406 18 -     63350 AATAAAATG-AAAT-------TGCTA
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      4652 17 -     37649 AATGAAA-A-GAAT-------TGCTA
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26542 18 -    437263 AATGAAATG-GAAT-------TGTTA
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137798 18 -    366855 AATGAAAAT-GAAT-------TGTTA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_61429                  27393 18 -     27816 AATAAAATG-GAAT-------TGTTA
i Moschus_moschiferus.MosMos_scaffold_61429              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31329 18 +     37127 AATGAAATA-GAAT-------TGCTA
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5092 18 +     14753 AATGAAATG-GAAT-------TGTTA
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2318 15 +     14296 AATGAAATG-GAAT-------TG---
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               297638 18 -  14710649 AATGAAATG-AAAT-------TGCTA
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                278262 18 -  10118263 AATGAAATG-GAAT-------TGTTA
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585819 18 -   6019432 AATGAAATG-GAAT-------TGTTA
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902028 18 -   4330536 AATGAAATG-GAAT-------TGTTA
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32587 18 +     33610 AATGAAATG-GAAT-------TGTTA
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186078 18 +    196477 ACTGGAATG-AAAT-------TGCTG
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025481 20 -   3037898 AATGGAGTG-GCATCTCT-C-TA---
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                                9787 18 +     21681 CATGAAATA-GAAT-------GGTTC
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865498 18 +   7148211 AATGAAATG-GAAT-------TGTTA
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756362 18 +    783361 AATGAAATA-GAAT-------TGCTA
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145954 18 -   9404916 AATGAAATT-AAAT-------TGCTA
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102574472 15 - 196305487 ---AAAACA-GAAT-------TTTTA
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2158 15 +      8486 ---AAAACA-GAAT-------TTTTA
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744899 15 + 199412804 ---AAAACA-GAAT-------TTTTA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355733  9 +   3988456 A------TT-GCTA-------GA---
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              500695 18 -   2017862 aataaaatg-aaac-------tgcTA
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         144625 18 +    630418 GGCAAAATG-GAAC-------GGTTA
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  2781413 18 -  10937097 AATGAAATG-GAAT-------TGTTA
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6811 18 -     18566 AATACAATG-GAAT-------TACTA
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458708 18 -    559221 AATGAAATT-AAAT-------TGCTA
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17584984 18 +  44047080 AATAAAGTG-TAAT-------TGTTA
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173405 18 -    191736 AATAAAGTG-TAAT-------TGTTA
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    36170 18 +     80009 caggaaaca-gaat-------tgtta
i Pan_paniscus.KQ411613.1                                T 2404 C 0
s Pan_troglodytes.CM009242.2                             187570162 18 + 189151597 caggaaaca-gaat-------tgtta
i Pan_troglodytes.CM009242.2                             n 0 n 0
s Panthera_onca.PanOnc_flattened_line_3271                  147113 18 +    230217 AATGAAATG-GAAT-------TGCGA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                259822 18 +  18783137 AATGAAATG-GAAT-------TGCGA
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4716969 18 -   8748460 AATGAAATG-GAAT-------TGCGA
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1264338 18 -   2937107 AATAAAGTG-GAAT-------TGTTA
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183437361 18 + 183742232 CATGAAATA-GAAT-------GGTTC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1519 18 +     20448 CATGAAATA-GAAT-------GGTTC
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20558045 18 +  20919399 CATGAAATA-GAAT-------GGTTC
i Papio_hamadryas.Contig39                               T 279 C 0
s Papio_kindae.k141_1936966                                    262 18 +     41871 CATGAAATA-GAAT-------GGTTC
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     3548 18 +     27711 CATGAAATA-GAAT-------GGTTC
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  3447 18 +      9205 CATGAAATA-GAAT-------GGTTC
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8848 18 -     78924 AATGAAACG-AAAT-------TGGTA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            4651 18 +     13100 AATAAAACA-GAAT-------TGCTA
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             3019 18 +     25941 AATAAAACA-GAAT-------TGCTA
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25818 20 -     29689 AATAAAATA-GAATCATT-A-TA---
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8460 18 +     63832 AATGAAATG-GAAT-------TGTTA
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38303 18 +     62158 CATGAAATA-GAAT-------GGCTC
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33030 18 +     89929 CATGAAATA-GAAT-------GGCTC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34446 18 +     51399 CATGAAATA-GAAT-------GGCTC
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290667 18 -  14605196 CATGAAATA-GAAT-------GGCTC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              412 18 +     22620 AATGAAATG-GAAT-------TGTTA
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34166 18 +     35617 AATGAAATG-GAAT-------TGTTA
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189125515 18 + 189387572 CATGAAACA-GAAT-------GGTTC
i Pongo_abelii.CM009266.2                                C 0 T 307
s Pongo_pygmaeus.ctg66                                     9565118 18 +   9816681 CATGAAACA-GAGT-------GGTTC
i Pongo_pygmaeus.ctg66                                   C 0 I 206
s Presbytis_comata.k141_677006                               67947 18 -     81375 CATGAAATA-GAAT-------GGTTC
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9774 18 +     10147 CATGAAATA-GAAT-------GGTTC
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9974 18 -     22811 AACAGAATG-GACT-------TGCTG
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986348 18 +   2598838 AATGAAATA-GAAT-------TGCTA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          24637 18 +     38485 AATGAAATA-GAAT-------TGCTA
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                              798 18 +      4256 AATGAAATA-GAAT-------TGCTA
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22156 18 +     35766 AATGAAATA-GAAT-------TGCTA
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            339 18 -     24134 AATGAAATA-GAAT-------TGCTA
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24151 18 -     67325 AATGAAATA-GAAT-------TGCTA
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            396 18 -      6182 AATGAAATA-GAAT-------TGCTA
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11180 18 -     21811 AATAGAGTA-GAAC-------TGCTA
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36649 18 +     42204 AATGAAATG-AAAT-------TGCTA
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973656 18 +  28871421 AATGAAATT-GAAG-------TGGTA
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1593 18 -      8028 AATGAAATT-GAAG-------TGGTA
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20270280 18 -  38429054 AATGAAATG-GAAT-------TGCCA
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                              9776 18 -     91421 CATGGAATG-GAAT-------GGTTC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603910 18 +   7812017 CATGGAATG-GAAT-------GGTTC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9749 18 -     72585 CATGGAATG-GAAT-------GGTTC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4873 18 +     55207 GGTAAAATG-GAAC-------GGTTA
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        366891 18 -   3329780 aatgaaata-gaat-------tgttA
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             1162 18 -     11128 CATGAAATA-GAAT-------GGTcc
i Rhinopithecus_bieti.k119_217274                        C 0 I 300
s Rhinopithecus_roxellana.NC_044550.1                     91230539 18 - 195417433 CATGAAATA-GAAT-------GGTcc
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 240
s Rhinopithecus_strykeri.ctg102                            7666247 18 +   7961872 CATGAAATA-GAAT-------GGTcc
i Rhinopithecus_strykeri.ctg102                          C 0 I 220
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84642 18 -     96226 AATGAAATT-GAAG-------TGGTA
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3526 18 +      4321 AATAAAGTG-GAAT-------TGTTA
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 C 0
s Semnopithecus_entellus.k141_11662                          14291 18 -     19888 CGTGAAATA-GAAT-------GGTTC
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21496 18 +     39453 CGTGAAATA-GAAT-------GGTTC
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2020 18 +     27826 CGTGAAATA-GAAT-------GGTTC
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1542 18 -     19483 CGTGAAATA-GAAT-------GGTTC
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1604 18 +      7198 CGTGAAATA-GAAT-------GGTTC
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9864 18 +     15514 CGTGAAATA-GAAT-------GGTTC
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187663 18 -    191337 GATGAAATT-GAAA-------AGTCA
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13646997 14 -  18376816 ---AAAGGAGTT---------TATTA
i Sorex_araneus.JH798187.1                               I 3 C 0
s Spermophilus_dauricus.KZ294078.1                         1948202 15 -   3870691 agcaaaatg-aaat-------ca---
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27191 18 +     97271 AATGAAATG-AAAT-------CAGTA
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14198 18 -    196729 AATGAAATG-GGAT-------TGCTA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   62882432 18 -  69701581 AATGAAATG-GAAT-------TTTGA
i Sus_scrofa.CM000828.4                                  I 2 C 0
s Symphalangus_syndactylus.tarseq_199                      1088046 18 -   1523678 CATGAAACA-GAAT-------GGTTC
i Symphalangus_syndactylus.tarseq_199                    I 206 T 206
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6795 18 +     41958 AATGAAAAG-GAAT-------TGTTA
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69440 18 +    116680 ACTGGAATG-AAAT-------TGCTA
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115178 18 -    156842 AATGAAATG-GAAT-------TGTTA
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383633 18 +    539355 AATGAAATG-GAAT-------TGTTG
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10627 18 +     70052 AATGAAATA-TAAT-------TGTTG
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               14932 18 +     25099 AATGAAATA-TAAT-------TGTTG
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422870 18 + 186847797 CATGAAATA-GAAT-------GGTTC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103159 20 +    114563 AATGAAATA-GAATCATT-A-TA---
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   1828 18 +      8208 AATGGAATA-AAAT-------GGCTG
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78936 18 +    610378 CATGAAATA-GAAT-------TGTTA
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          5601 18 -     20410 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9793 18 +     15221 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5701 18 +     19930 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2128 18 -     19997 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42247 18 -     60166 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9719 18 -     27529 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9659 18 -     18194 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3395 18 -     21137 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2097 18 -     10723 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1250 18 +      9834 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19568 18 +     32220 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933665 18 +   6242583 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2910 18 +     20839 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    643 18 -      1748 GATGAAATG-AAAT-------TGTTA
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 C 0
s Tupaia_chinensis.KB320699.1                              2149590 18 +   4065304 AATGAAATG-GAAT-------GGCTA
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     3181 18 -     10553 AGTGATATG-GAAT-------TGCTA
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737660 18 +  33153633 AATGAAATG-GAAC-------TGTTA
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_97021                    1891 18 -      4736 AATGAAATG-GAAA-------TGCTA
i Uropsilus_gracilis.UroGra_scaffold_97021               C 0 C 0
s Ursus_maritimus.KK499267.1                               4846892 18 -   5085361 AATGAAACG-AAAT-------TGCTA
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368364 18 -   5488506 AATGAAGTG-GAGT-------TACTA
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7369 18 -     43706 AATGAAATT-AAAT-------TGCTA
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19697 15 -     24430 AATAAAATG-GAAC-------CA---
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1817 18 +      2932 AATAAAATG-AAAT-------TGCTA
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9974 15 +     63895 AGAGGGAGG-GAAT-------CA---
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11352 18 +     12536 AATGAACTG-GAAT-------TGTAA
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    151359  0 -    313613 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25316 19 +     32600 T
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    15418  9 -    145209 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1033 4 +     62944 CGT-----T
s Acinonyx_jubatus.LLWD01001279.1                           823284 1 -   1699592 T--------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 T 57
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506975 4 -  29979442 CAT-----C
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             75199 4 -    347723 CAT-----T
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64975 7 -     89534 --TAATTTT
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9299 4 -     52922 CAT-----T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9226 4 -     28001 CAT-----T
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9352 4 -      9772 CAT-----T
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            509 4 -     12518 CAT-----T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675149 4 -   2318259 TAT-----T
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183098 4 +    412891 TAT-----T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97601 4 -    100397 TAT-----T
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7255 2 +     20879 --T-----A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14436 4 +     17124 AGT-----G
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2450 4 +     43469 TAT-----T
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  49295 4 -     92717 AAT-----C
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              49920 4 +     85213 AAT-----C
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191534 4 +  23207421 TAT-----T
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2000 4 -     18090 TAT-----T
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26071 4 +     34529 TAT-----T
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    199110 4 -    288883 TAT-----T
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20272315 4 +  48749331 TAT-----T
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1124875 4 -   1948126 TAT-----T
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18082953 4 +  45695690 TAT-----T
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2818442 4 +   4408762 TAT-----T
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998893 4 -  17673402 TGT-----C
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331357 4 -   7040546 TGT-----C
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399633 4 -   1652518 TGT-----C
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795763 4 -  60362399 TAC-----T
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181820 4 -    185531 TAC-----T
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031207 4 -   9314153 TAC-----T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955471 4 -  59632846 TAC-----T
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496772 4 +  63665305 TAC-----T
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18829267 4 +  46296322 TAT-----T
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18059987 4 -  44709034 TAT-----T
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           141030 4 -    496798 AAG-----T
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2868 4 -     11696 TAT-----T
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133631 2 +    179628 --C-----T
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89241 4 +    217609 TAT-----T
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18347456 2 -  23392119 --T-----T
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18359716 2 -  23407841 --T-----T
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98591 2 +    143979 --T-----T
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         4946 4 -      8605 AAT-----T
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227866 4 +  27778364 tat-----t
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2584 4 -      3715 TAT-----T
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470270 4 +   4669795 CGT-----T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8819 4 -     19203 CGT-----T
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3238 4 +      8260 CGT-----T
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3468 4 +     27781 CGT-----T
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3614 4 -     20310 CAT-----T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6598 4 +     29689 CAT-----T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             951 4 +      9989 CAT-----T
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9286 4 -     27936 CAT-----T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9305 4 -     11289 CAT-----T
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811681 4 +  39242232 CAT-----T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217372 4 -  21565898 CAT-----T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34492 4 -     53127 CAT-----T
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1784 4 +      7159 CAT-----T
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9297 4 -     27947 CAT-----T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9273 4 +     17596 CAT-----T
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39767 4 -     41420 CAT-----T
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4788 4 -      6351 CAT-----T
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16713 4 -     52598 AAT-----C
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12062 4 +     57038 AAT-----C
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1248486 2 +   2543920 --T-----T
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18423236 4 -  18827391 CAT-----T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9679 4 -     50209 CAT-----T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416684 4 + 135778131 CAT-----T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15145 4 +     19366 CAT-----T
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170244 4 +    839153 CAT-----T
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1905213 4 +   2368649 CAT-----T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944883 4 + 200372422 CAT-----T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31752 4 +     84244 CAT-----T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545975 4 -  53390261 TAT-----T
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10484 4 -     20389 TAT-----C
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_109268              7542 4 +      9948 CAT-----T
i Crocidura_indochinensis.CroInd_scaffold_109268         C 0 T 17
s Cuniculus_paca.CunPac_flattened_line_231100                 2841 2 +      5455 --T-----G
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1224 2 +      3576 --T-----T
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24229 1 -     87169 T--------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 T 57
s Dasypus_novemcinctus.JH564415.1                            61058 4 +   2246927 TGT-----T
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532883 4 -  12879189 AAT-----T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811170 4 +  35494412 TAT-----T
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8627899 4 +  20541912 TAT-----T
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669399 4 +   1390856 TAT-----T
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2474 4 +    198055 TAT-----T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34264 2 +     67921 --T-----T
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18895792 2 +  37912305 --T-----T
i Dipodomys_ordii.KN672350.1                             C 0 I 5
s Dipodomys_stephensi.DipSte_scaffold_75855                  12002 2 +     14536 --T-----T
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 I 5
s Dolichotis_patagonum.DolPat_scaffold_30833                 31481 2 -     42551 --T-----T
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE759718.1                                   7405 4 +     11740 CAT-----T
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310271 4 +    607251 TAT-----T
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1088994 4 +  10337057 CAT-----T
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16325761 4 -  41312741 CAT-----T
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144056 4 -  14770903 TAT-----C
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279741 4 +   4378816 TAT-----G
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527562 4 -  39960074 TAT-----G
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29577 4 +    498745 TAT-----G
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3325330 4 -   7059049 TAT-----C
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21199915 4 -  21539334 CAT-----T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10846 4 +    133382 CAT-----T
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24783 4 -     44125 TAT-----T
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Fukomys_damarensis.KN121974.1                             848491 2 +   3816255 --C-----T
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Felis_catus.AANG03299807.1                                   406 1 -       507 T--------
i Felis_catus.AANG03299807.1                             C 0 T 57
s Felis_catus_fca126.CM031415.1                           20191984 1 + 205367284 T--------
i Felis_catus_fca126.CM031415.1                          C 0 T 57
s Felis_nigripes.FelNig_flattened_line_20823                  5509 1 -     36744 T--------
i Felis_nigripes.FelNig_flattened_line_20823             C 0 T 57
s Galagoides_demidoff.k141_31856                              3199 4 -      3432 aac-----a
i Galagoides_demidoff.k141_31856                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25453 4 +     26054 TAT-----T
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30340 2 +     49224 --T-----T
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              10404 4 -     32273 CAT-----T
i Gorilla_beringei.k141_3596273                          I 34 I 140
s Gorilla_gorilla.LT578341.1                             186332554 4 + 186649187 CAT-----T
i Gorilla_gorilla.LT578341.1                             I 18 I 140
s Graphiurus_murinus.GraMur_scaffold_10447                   30068 2 +     78134 --T-----T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238146 1 +    327341 T--------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 T 57
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17471 4 +     36099 TAT-----T
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20659370 2 +  22651954 --T-----T
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 231 4 +       961 TAT-----C
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112026 4 +    128679 TAT-----T
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108364 4 +   1711038 tat-----c
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39805 4 +     43066 TAT-----C
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    429243 4 +    630532 CAT-----T
i Hoolock_leuconedys.ctg274                                 T 203 I 203
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19839 2 -    143317 --T-----T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40611 1 +     55795 T--------
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 T 57
s Hylobates_agilis.k141_307679                               12161 4 -     15490 CAT-----T
i Hylobates_agilis.k141_307679                           T 205 C 0
s Hylobates_klossii.k141_282416                              54166 4 +     67168 CAT-----T
i Hylobates_klossii.k141_282416                          T 205 C 0
s Hylobates_pileatus_b.LG02                                     189537818 4 - 191637585 CAT-----T
i Hylobates_pileatus_b.LG02                                     T 205 C 0
s Hylobates_pileatus_a.tarseq_633                            3330711 4 -  11177569 CAT-----T
i Hylobates_pileatus_a.tarseq_633                          T 205 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80913 2 +    135385 --C-----T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514575 2 -   7955117 --t-----a
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   18155 4 +     31101 AAT-----C
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22387 4 +     23964 TAT-----T
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271355 7 -   9596543 --TGATTTT
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1654 4 -      3359 TAT-----T
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    12235 4 -     42476 TAT-----T
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6789 4 -     23766 AAT-----C
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24736 4 +     45836 AAT-----C
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31647 4 -     32627 AAT-----C
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      22791 4 +     54090 AAT-----C
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3036094 4 +   3914936 CAT-----T
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             267465 4 -    662738 TAT-----T
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1431440 4 +   1826925 CGT-----T
i Lophocebus_aterrimus.ctg367                            T 373 C 0
s Loris_lydekkerianus.k141_2539221                             683 4 +     11245 AGT-----G
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999519 4 +   6120653 AGT-----G
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214504 4 -  43346337 TAT-----C
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951711 4 -  59628241 TAC-----T
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               1625 4 +     40492 CGT-----T
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670885 4 +  60120075 CGT-----T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7383 4 -     26193 CGT-----T
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75177 4 -    114318 CGT-----T
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   896 4 -     23192 CGT-----T
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10349 4 -     29190 TGT-----T
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18916 4 +     37952 CGT-----T
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834004 4 + 187317192 CGT-----T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452565 4 -  25927173 CGT-----T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74765 4 +     89720 CGT-----T
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1762 4 +     20474 CGT-----T
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1563 4 -     14993 CGT-----T
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324436 4 -    668171 CGT-----T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15705 4 -     15935 CGT-----T
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20502 4 -     45290 CGT-----T
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87551 4 +     94391 TAT-----T
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23932057 4 -  24302211 CGT-----T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346235 4 +    752769 CGT-----T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15596 4 +    737560 TAT-----T
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              46985 4 -    317179 TAT-----T
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097425 2 -  40650429 --t-----a
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6766 4 -    207569 TAT-----C
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6225 4 +     13704 CAT-----T
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3055 4 +     10310 TAT-----T
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18283315 4 -  93316391 AAT-----C
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13410 4 -     19307 CAC-----T
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849084 4 +   8254450 tat-----t
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32960 4 +     64694 TAT-----T
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3792 4 -     28506 CAT-----T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62424 4 -     63350 CAT-----T
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      4669 4 -     37649 AAT-----C
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26560 4 -    437263 TAT-----T
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137816 4 -    366855 TAT-----C
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_61429                  27411 4 -     27816 TAT-----T
i Moschus_moschiferus.MosMos_scaffold_61429              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31347 1 +     37127 T--------
i Mungos_mungo.MunMun_flattened_line_23663               C 0 T 57
s Murina_feae.MurFea_scaffold_85699                           5110 4 +     14753 TAT-----T
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2333 2 +     14296 --T-----T
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               297656 4 -  14710649 CAT-----T
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                278280 4 -  10118263 TAT-----T
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585837 4 -   6019432 TAT-----T
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902046 4 -   4330536 TAT-----T
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32605 4 +     33610 TAT-----T
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186096 4 +    196477 TAT-----T
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025501 2 -   3037898 --T-----T
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                                9805 4 +     21681 CAT-----T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865516 4 +   7148211 TAT-----T
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756380 4 +    783361 TAT-----T
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145972 4 -   9404916 TAC-----T
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102574487 4 - 196305487 AGT-----G
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2173 4 +      8486 AGT-----G
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744914 4 + 199412804 AGT-----G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355742 2 +   3988456 --T-----T
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              500713 4 -   2017862 CAT-----T
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         144643 4 +    630418 TAT-----T
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  2781431 4 -  10937097 TAT-----T
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6829 4 -     18566 TAT-----T
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458726 4 -    559221 TAC-----T
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17585002 4 +  44047080 TAT-----T
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173423 4 -    191736 TAT-----T
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    36188 4 +     80009 cat-----t
i Pan_paniscus.KQ411613.1                                C 0 I 2335
s Pan_troglodytes.CM009242.2                             189137348 4 + 189151597 cat-----t
i Pan_troglodytes.CM009242.2                             n 0 I 14
s Panthera_onca.PanOnc_flattened_line_3271                  147131 1 +    230217 T--------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 T 57
s Panthera_pardus.KV860321.1                                259840 1 +  18783137 T--------
i Panthera_pardus.KV860321.1                             C 0 T 57
s Panthera_tigris.KE722367.1                               4716987 1 -   8748460 T--------
i Panthera_tigris.KE722367.1                             C 0 T 57
s Pantholops_hodgsonii.KE114653.1                          1264356 4 -   2937107 TAT-----T
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183437379 4 + 183742232 CGT-----T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1537 4 +     20448 CGT-----T
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20558063 4 +  20919399 CGT-----T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                    280 4 +     41871 CGT-----T
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     3566 4 +     27711 CGT-----T
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  3465 4 +      9205 CGT-----T
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8866 1 -     78924 T--------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 T 57
s Perodicticus_ibeanus.k141_855320                            4669 4 +     13100 AGT-----G
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             3037 4 +     25941 AGT-----G
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25838 2 -     29689 --T-----T
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8478 4 +     63832 TAT-----T
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38321 4 +     62158 CAT-----T
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33048 4 +     89929 CAT-----T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34464 4 +     51399 CAT-----T
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290685 4 -  14605196 CAT-----T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              430 4 +     22620 TAT-----T
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34184 4 +     35617 TAT-----T
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189125226 4 + 189387572 CAT-----T
i Pongo_abelii.CM009266.2                                T 307 C 0
s Pongo_pygmaeus.ctg66                                     9565342 4 +   9816681 CAT-----T
i Pongo_pygmaeus.ctg66                                   I 206 T 206
s Presbytis_comata.k141_677006                               67965 4 -     81375 CAT-----T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9792 4 +     10147 CAT-----T
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9992 4 -     22811 TAT-----C
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986366 4 +   2598838 AAT-----C
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          24655 4 +     38485 AAT-----C
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                              816 4 +      4256 AAT-----C
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22174 4 +     35766 AAT-----C
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            357 4 -     24134 AAT-----C
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24169 4 -     67325 AAT-----C
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            414 4 -      6182 AAT-----C
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11198 4 -     21811 CAT-----T
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36667 4 +     42204 CAT-----T
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973674 4 +  28871421 TAT-----T
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1611 4 -      8028 TAT-----T
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20270298 1 -  38429054 T--------
i Puma_concolor.QAVW01001104.1                           C 0 T 57
s Pygathrix_cinerea.k141_1153803                              9794 4 -     91421 CAT-----T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603928 4 +   7812017 CAT-----T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9767 4 -     72585 CAT-----T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4891 4 +     55207 TAT-----T
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        366909 4 -   3329780 TAT-----C
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             1480 4 -     11128 cat-----t
i Rhinopithecus_bieti.k119_217274                        I 300 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230797 4 - 195417433 cat-----t
i Rhinopithecus_roxellana.NC_044550.1                    I 240 I 40
s Rhinopithecus_strykeri.ctg102                            7666485 4 +   7961872 cat-----t
i Rhinopithecus_strykeri.ctg102                          I 220 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84660 4 -     96226 TAT-----T
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3544 4 +      4321 TAT-----T
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151359 2 -    313613 --T-----T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          14309 4 -     19888 CAT-----T
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21514 4 +     39453 CAT-----T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2038 4 +     27826 CAT-----T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1560 4 -     19483 CAT-----T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1622 4 +      7198 CAT-----T
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9882 4 +     15514 CAT-----T
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187681 4 -    191337 TAT-----T
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13647011 4 -  18376816 TAT-----C
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1948217 2 -   3870691 --t-----a
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27209 4 +     97271 CAT-----T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14216 1 -    196729 T--------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 T 57
s Sus_scrofa.CM000828.4                                   62882450 4 -  69701581 CAT-----T
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1087858 4 -   1523678 CAT-----T
i Symphalangus_syndactylus.tarseq_199                    T 206 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6813 4 +     41958 TAT-----T
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69458 4 +    116680 TAT-----T
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115196 4 -    156842 CAT-----C
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383651 4 +    539355 CAT-----C
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10645 4 +     70052 AAT-----T
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               14950 4 +     25099 AAT-----T
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422888 4 + 186847797 CGT-----T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103179 2 +    114563 --T-----T
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   1846 4 +      8208 CAT-----T
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78954 4 +    610378 CAT-----T
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          5619 4 -     20410 CAT-----T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9811 4 +     15221 CAT-----T
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5719 4 +     19930 CAT-----T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2146 4 -     19997 CAT-----T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42265 4 -     60166 CAT-----T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9737 4 -     27529 CAT-----T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9677 4 -     18194 CAT-----T
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3413 4 -     21137 CAT-----T
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2115 4 -     10723 CAT-----T
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1268 4 +      9834 CAT-----T
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19586 4 +     32220 CAT-----T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933683 4 +   6242583 CAT-----T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2928 4 +     20839 CAT-----T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    661 4 -      1748 TAT-----T
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 C 0
s Tupaia_chinensis.KB320699.1                              2149608 4 +   4065304 TAT-----T
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     3199 4 -     10553 TAT-----T
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737678 4 +  33153633 TAT-----T
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_97021                    1909 4 -      4736 TAT-----T
i Uropsilus_gracilis.UroGra_scaffold_97021               C 0 C 0
s Ursus_maritimus.KK499267.1                               4846910 4 -   5085361 CAT-----C
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368382 4 -   5488506 TGT-----C
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7387 4 -     43706 TAC-----T
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19712 2 -     24430 --T-----A
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1835 4 +      2932 CAT-----T
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9989 7 +     63895 --TAATTTT
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11370 4 +     12536 TAT-----T
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Varecia_variegata.k141_1128296                              7155 0 +     24756 C
e Varecia_rubra.k141_590885                                   7107 0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414 0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25316 19 +     32600 T
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    15418 9 -    145209 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Lemur_catta.scaffold_24                                 15519761 0 -  30322482 C
e Hapalemur_occidentalis.k141_907772                          9234 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402 0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298 0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517 0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                               9432 0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267 0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247 0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321 0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369 0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369 0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184 0 -     25546 C
e Eulemur_collaris.k141_377015                                2154 0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453 0 -     14127 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1037 14 +     62944 G---T----CACCGAGTAGAA
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506979  5 -  29979442 A---T----CAC---------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 T 64
s Ailurus_fulgens.LNAC01001112.1                             75203  5 -    347723 A---T----CAC---------
i Ailurus_fulgens.LNAC01001112.1                         C 0 T 65
s Allactaga_bullata.AllBul_scaffold_9566                     64982  5 -     89534 A---G----CAC---------
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 T 64
s Allenopithecus_nigroviridis.k141_3361533                    9303 14 -     52922 G---T----CACCGAGTAGAG
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9230 14 -     28001 G---T----CACCGAGTAGAA
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9356 14 -      9772 G---T----CACCGAGTAGAA
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            513 14 -     12518 G---T----CACCGAGTAGAA
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675153  5 -   2318259 A---T----CAC---------
i Ammotragus_lervia.NIVO01071767.1                       C 0 T 64
s Anoura_caudifer.AnoCau_scaffold_1412                      183102  5 +    412891 A---T----CAC---------
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 T 64
s Antilocapra_americana.AntAmePen_scaffold_12469             97605  5 -    100397 A---T----CAC---------
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 T 64
s Aplodontia_rufa.AprRuf_scaffold_68852                       7257  5 +     20879 A---T----CAC---------
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 T 59
s Arctocebus_calabarensis.k141_288239                        14440  5 +     17124 G---T----CAC---------
i Arctocebus_calabarensis.k141_288239                    C 0 T 64
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2454  5 +     43469 A---T----CAC---------
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 T 64
s Avahi_laniger.k141_765380                                  49299  5 -     92717 A---T----CAC---------
i Avahi_laniger.k141_765380                              C 0 T 61
s Avahi_peyrierasi.k141_1424874                              49924  5 +     85213 A---T----CAC---------
i Avahi_peyrierasi.k141_1424874                          C 0 T 61
s Balaenoptera_acutorostrata.KI537508.1                   15191538  5 +  23207421 A---T----CAT---------
i Balaenoptera_acutorostrata.KI537508.1                  C 0 T 64
s Balaenoptera_bonaerensis.DF707048.1                         2004  5 -     18090 A---T----CAT---------
i Balaenoptera_bonaerensis.DF707048.1                    C 0 T 64
s Beatragus_hunteri.BeaHun_scaffold_50177                    26075  5 +     34529 A---T----CAC---------
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 T 64
s Bison_bison.KN261452.1                                    199114  5 -    288883 A---T----CAC---------
i Bison_bison.KN261452.1                                 C 0 T 64
s Bos_indicus.CM003047.1                                  20272319  5 +  48749331 A---T----CAC---------
i Bos_indicus.CM003047.1                                 C 0 T 64
s Bos_mutus.JH880303.1                                     1124879  5 -   1948126 A---T----CAC---------
i Bos_mutus.JH880303.1                                   C 0 T 64
s Bos_taurus.CM000203.6                                   18082957  5 +  45695690 A---T----CAC---------
i Bos_taurus.CM000203.6                                  C 0 T 64
s Bubalus_bubalis.KI419123.1                               2818446  5 +   4408762 A---T----CAC---------
i Bubalus_bubalis.KI419123.1                             C 0 T 64
s Camelus_bactrianus.KN276810.1                            9998897  5 -  17673402 A---T----CAC---------
i Camelus_bactrianus.KN276810.1                          C 0 T 64
s Camelus_dromedarius.KN272107.1                           2331361  5 -   7040546 A---T----CAC---------
i Camelus_dromedarius.KN272107.1                         C 0 T 64
s Camelus_ferus.KB017975.1                                  399637  5 -   1652518 A---T----CAC---------
i Camelus_ferus.KB017975.1                               C 0 T 64
s CanFam4.chr16                                           17795767  5 -  60362399 A---A----CAC---------
i CanFam4.chr16                                          C 0 T 65
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181824  5 -    185531 A---A----CAC---------
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 T 65
s Canis_lupus_dingo.QKWQ01000480.1                         9031211  5 -   9314153 A---A----CAC---------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 T 65
s Canis_lupus_familiaris.chr16                            17955475  5 -  59632846 A---A----CAC---------
i Canis_lupus_familiaris.chr16                           C 0 T 65
s Canis_lupus_orion.HG994398.1                            18496776  5 +  63665305 A---A----CAC---------
i Canis_lupus_orion.HG994398.1                           C 0 T 65
s Capra_aegagrus.CM003241.1                               18829271  5 +  46296322 A---T----CAC---------
i Capra_aegagrus.CM003241.1                              C 0 T 64
s Capra_hircus.CM004588.1                                 18059991  5 -  44709034 A---T----CAC---------
i Capra_hircus.CM004588.1                                C 0 T 64
s Carlito_syrichta.NW_007259797.1                           141034  5 -    496798 A---C----CCC---------
i Carlito_syrichta.NW_007259797.1                        C 0 T 65
s Carollia_perspicillata.CarPer_scaffold_92756                2872  5 -     11696 A---T----CAC---------
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 T 64
s Castor_canadensis.CasCan_scaffold_2074                    133633  9 +    179628 G---TCTTACAC---------
i Castor_canadensis.CasCan_scaffold_2074                 C 0 T 61
s Catagonus_wagneri.CatWag_scaffold_2839                     89245  5 +    217609 A---T----CAC---------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 T 105
s Cavia_aperea.AVPZ01000300.1                             18347458  5 -  23392119 A---T----TGT---------
i Cavia_aperea.AVPZ01000300.1                            C 0 T 63
s Cavia_porcellus.DS562891.1                              18359718  5 -  23407841 A---T----TGT---------
i Cavia_porcellus.DS562891.1                             C 0 T 63
s Cavia_tschudii.CavTsc_scaffold_8919                        98593  5 +    143979 A---T----TAT---------
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 T 63
s Cephalopachus_bancanus.k141_2037105                         4950  5 -      8605 G---C----CCC---------
i Cephalopachus_bancanus.k141_2037105                    C 0 T 65
s Ceratotherium_simum.JH767749.1                          12227870  5 +  27778364 a---T----CAC---------
i Ceratotherium_simum.JH767749.1                         C 0 T 64
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2588  5 -      3715 A---T----CAC---------
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 T 64
s Cercocebus_atys.KQ010504.1                               4470274 14 +   4669795 G---C----CACCGAGTAGAA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8823 14 -     19203 G---C----CACCGAGTAGAA
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3242 14 +      8260 G---C----CACCGAGTAGAA
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3472 14 +     27781 G---C----CACCGAGTAGAA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3618 14 -     20310 G---T----CACCGAGTAGAA
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6602 14 +     29689 G---T----CACCGAGTAGAA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             955 14 +      9989 G---T----CACCGAGTAGAA
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9290 14 -     27936 G---T----CACCGAGTAGAA
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9309 14 -     11289 G---T----CACCGAGTAGAA
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811685 14 +  39242232 G---T----CACCGAGTAGAA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217376 14 -  21565898 G---T----CACCGAGTAGAA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34496 14 -     53127 G---T----CACCGAGTAGAA
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1788 14 +      7159 G---T----CACCGAGTAGAA
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9301 14 -     27947 G---T----CATCAAGTAGAA
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9277 14 +     17596 G---T----CACCGAGTAGAA
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39771 14 -     41420 G---T----CACAGAGTAGAA
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4792  3 -      6351 A---T----C-----------
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 T 47
s Cheirogaleus_major.k141_333249                             16717  5 -     52598 A---T----CAC---------
i Cheirogaleus_major.k141_333249                         C 0 T 60
s Cheirogaleus_medius.k141_1055463                           12066  5 +     57038 A---T----CAC---------
i Cheirogaleus_medius.k141_1055463                       C 0 T 60
s Chinchilla_lanigera.JH722012.1                           1248488  5 +   2543920 A---T----CAT---------
i Chinchilla_lanigera.JH722012.1                         C 0 T 61
s Chlorocebus_aethiops.ctg25                              18423240 14 -  18827391 G---T----CACCGAGTAGAA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9683 14 -     50209 G---T----CACCGAGTAGAA
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416688 14 + 135778131 G---T----CACCGAGTAGAA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15149  5 +     19366 A---T----CAC---------
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 T 63
s Choloepus_hoffmanni.KN194906.1                            170248  5 +    839153 A---T----CAC---------
i Choloepus_hoffmanni.KN194906.1                         C 0 T 63
s Colobus_angolensis.KN981557.1                            1905217 14 +   2368649 G---T----CACCGAGTAGAA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944887 14 + 200372422 G---T----CACCGAGTAGAA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31756 14 +     84244 G---T----CACCGAGTAGAA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545979  5 -  53390261 A---T----TAA---------
i Condylura_cristata.JH655891.1                          C 0 T 64
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10488  5 -     20389 A---T----CAT---------
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 T 61
s Crocidura_indochinensis.CroInd_scaffold_287352               360  5 +      4208 A---T----CAC---------
i Crocidura_indochinensis.CroInd_scaffold_287352         I 18 T 35
s Cuniculus_paca.CunPac_flattened_line_231100                 2843  5 +      5455 A---T----CAT---------
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 T 64
s Dasyprocta_punctata.DasPun_flattened_line_206793            1226  5 +      3576 A---T----CCT---------
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 T 64
s Dasypus_novemcinctus.JH564415.1                            61062  3 +   2246927 A---T----C-----------
i Dasypus_novemcinctus.JH564415.1                        C 0 T 61
s Daubentonia_madagascariensis.ctg71                      12532887  5 -  12879189 A---T----TAC---------
i Daubentonia_madagascariensis.ctg71                     C 0 T 64
s Delphinapterus_leucas.KZ290073.1                        16811174  5 +  35494412 A---T----CAC---------
i Delphinapterus_leucas.KZ290073.1                       C 0 T 64
s Desmodus_rotundus.KZ672289.1                             8627903  5 +  20541912 A---T----CAC---------
i Desmodus_rotundus.KZ672289.1                           C 0 T 64
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669403  5 +   1390856 A---T----CAC---------
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 T 64
s Diceros_bicornis.DicBicMic_scaffold_5955                    2478  5 +    198055 A---T----CAC---------
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 T 64
s Dinomys_branickii.DinBra_scaffold_21862                    34266  5 +     67921 A---T----CAT---------
i Dinomys_branickii.DinBra_scaffold_21862                C 0 T 61
s Dipodomys_ordii.KN672350.1                              18895799  5 +  37912305 A---T----TAT---------
i Dipodomys_ordii.KN672350.1                             I 5 T 64
s Dipodomys_stephensi.DipSte_scaffold_75855                  12009  5 +     14536 A---T----TAT---------
i Dipodomys_stephensi.DipSte_scaffold_75855              I 5 T 64
s Dolichotis_patagonum.DolPat_scaffold_30833                 31483  5 -     42551 A---T----CAT---------
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 T 64
s Eidolon_helvum.KE759718.1                                   7409  5 +     11740 T---T----CAT---------
i Eidolon_helvum.KE759718.1                              C 0 T 63
s Elaphurus_davidianus.JRFZ01104969.1                       310275  5 +    607251 A---T----CAC---------
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 T 64
s Elephantulus_edwardii.JH947257.1                         1088998  5 +  10337057 A---C----CAC---------
i Elephantulus_edwardii.JH947257.1                       C 0 T 64
s Enhydra_lutris.KZ291758.1                               16325765  5 -  41312741 A---A----CAC---------
i Enhydra_lutris.KZ291758.1                              C 0 T 65
s Eptesicus_fuscus.JH977646.1                              2144060  5 -  14770903 A---T----CCC---------
i Eptesicus_fuscus.JH977646.1                            C 0 T 64
s Equus_asinus.JREZ01000139.1                              1279745  5 +   4378816 A---T----CAC---------
i Equus_asinus.JREZ01000139.1                            C 0 T 64
s Equus_caballus.CM000403.2                               18527566  5 -  39960074 A---T----CAC---------
i Equus_caballus.CM000403.2                              C 0 T 64
s Equus_przewalskii.KK951119.1                               29581  5 +    498745 A---T----CAC---------
i Equus_przewalskii.KK951119.1                           C 0 T 64
s Erinaceus_europaeus.JH835339.1                           3325334  5 -   7059049 A---T----CAT---------
i Erinaceus_europaeus.JH835339.1                         C 0 T 63
s Erythrocebus_patas.Contig38                             21199919 14 -  21539334 G---T----CACCGAGTAGAA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10850  5 +    133382 A---T----CAC---------
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 T 64
s Eubalaena_japonica.EubJap_flattened_line_31514             24787  5 -     44125 A---T----CAT---------
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 T 64
s Fukomys_damarensis.KN121974.1                             848493  5 +   3816255 G---T----CAT---------
i Fukomys_damarensis.KN121974.1                          C 0 T 64
s Galagoides_demidoff.k141_31856                              3203  5 -      3432 c---a----ctc---------
i Galagoides_demidoff.k141_31856                         C 0 T 77
s Galeopterus_variegatus.GalVar_scaffold_56069               25457  5 +     26054 A---C----CAC---------
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 T 64
s Glis_glis.GliGli_scaffold_19807                            30342  5 +     49224 G---T----CAC---------
i Glis_glis.GliGli_scaffold_19807                        C 0 T 58
s Gorilla_beringei.k141_3596273                              10548 14 -     32273 G---T----CACCGAGTAGAA
i Gorilla_beringei.k141_3596273                          I 140 T 140
s Gorilla_gorilla.LT578341.1                             186332698 14 + 186649187 G---T----CACCGAGTAGAA
i Gorilla_gorilla.LT578341.1                             I 140 T 140
s Graphiurus_murinus.GraMur_scaffold_10447                   30070  5 +     78134 A---T----CAC---------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 T 58
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17475  5 +     36099 A---T----CAC---------
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 T 64
s Heterocephalus_glaber.JH602082.1                        20659372  5 +  22651954 A---T----CAT---------
i Heterocephalus_glaber.JH602082.1                       C 0 T 64
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 235  5 +       961 A---T----CAC---------
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 T 64
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112030  5 +    128679 A---T----CAC---------
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 T 64
s Hipposideros_armiger.JXIK01000431.1                       108368  5 +   1711038 A---T----CAC---------
i Hipposideros_armiger.JXIK01000431.1                    C 0 T 63
s Hipposideros_galeritus.HipGal_scaffold_29171               39809  5 +     43066 A---T----CAC---------
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 T 63
s Hoolock_leuconedys.ctg274                                    429450 14 +    630532 G---T----CACCGAGTAGAA
i Hoolock_leuconedys.ctg274                                 I 203 T 203
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19841  5 -    143317 A---T----CAT---------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 T 64
s Hylobates_agilis.k141_307679                               12165 14 -     15490 G---T----CACCGAGTAGAA
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              54170 14 +     67168 G---T----CACCGAGTAGAA
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189537822 14 - 191637585 G---T----CACCGAGTAGAA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3330715 14 -  11177569 G---T----CACCGAGTAGAA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80915  5 +    135385 A---T----CAT---------
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 T 64
s Ictidomys_tridecemlineatus.JH393364.1                    7514577  5 -   7955117 a---t----CAT---------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 T 59
s Indri_indri.k141_3655594                                   18159  5 +     31101 A---T----CAC---------
i Indri_indri.k141_3655594                               C 0 T 64
s Inia_geoffrensis.IniGeo_flattened_line_48101               22391  5 +     23964 A---T----CAC---------
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 T 64
s Jaculus_jaculus.JH725527.1                               8271362  5 -   9596543 A---G----CAC---------
i Jaculus_jaculus.JH725527.1                             C 0 T 64
s Kogia_breviceps.KogBre_flattened_line_192630                1658  5 -      3359 A---G----CAC---------
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 T 64
s Lasiurus_borealis.LasBor_scaffold_32767                    12239  5 -     42476 A---G----CCT---------
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 T 69
s Lepilemur_ankaranensis.k141_596936                          6793  5 -     23766 A---T----CAC---------
i Lepilemur_ankaranensis.k141_596936                     C 0 T 64
s Lepilemur_dorsalis.k141_577674                             24740  5 +     45836 A---T----CAC---------
i Lepilemur_dorsalis.k141_577674                         C 0 T 64
s Lepilemur_ruficaudatus.k141_420445                         31651  5 -     32627 A---T----CAC---------
i Lepilemur_ruficaudatus.k141_420445                     C 0 T 64
s Lepilemur_septentrionalis.k141_185316                      22795  5 +     54090 A---T----CAC---------
i Lepilemur_septentrionalis.k141_185316                  C 0 T 64
s Leptonychotes_weddellii.KB714746.1                       3036098  5 +   3914936 A---T----CAC---------
i Leptonychotes_weddellii.KB714746.1                     C 0 T 65
s Lipotes_vexillifer.KE559953.1                             267469  5 -    662738 A---T----CAC---------
i Lipotes_vexillifer.KE559953.1                          C 0 T 61
s Lophocebus_aterrimus.ctg367                              1431444 15 +   1826925 G---TC---CACCGAGTAGAA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             687  5 +     11245 A---T----GAC---------
i Loris_lydekkerianus.k141_2539221                       C 0 T 59
s Loris_tardigradus.ctg83                                   999523  5 +   6120653 A---T----GAC---------
i Loris_tardigradus.ctg83                                C 0 T 60
s Loxodonta_africana.GL010049.1                            4214508  5 -  43346337 A---T----CAT---------
i Loxodonta_africana.GL010049.1                          C 0 T 64
s Lycaon_pictus.CM007581.1                                17951715  5 -  59628241 A---A----CAC---------
i Lycaon_pictus.CM007581.1                               C 0 T 65
s Macaca_arctoides.k141_2326796                               1629 14 +     40492 G---T----CACCGAGTAGAA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670889 14 +  60120075 G---T----CACCGAGTAGAA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7387 14 -     26193 G---T----CACCGAGTAGAA
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75181 14 -    114318 G---T----CACCGAGTAGAA
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   900 14 -     23192 G---T----CACCGAGTAGAA
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10353 14 -     29190 G---C----CACCGAGTAGAA
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18920 14 +     37952 G---T----CACCGAGTAGAA
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834008 14 + 187317192 G---T----CACCGAGTAGAA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452569 14 -  25927173 G---T----CACCGAGTAGAA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74769 14 +     89720 G---T----CACCGAGTAGAA
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1766 14 +     20474 G---T----CACCGAGTAGAA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1567 14 -     14993 G---T----CACTGAGTAGAA
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324440 14 -    668171 G---T----CACCGAGTAGAA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15709 14 -     15935 G---T----CACCGAGTAGAA
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20506 14 -     45290 G---T----CACCGAGTAGAA
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87555  5 +     94391 T---T----CAT---------
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 T 62
s Mandrillus_leucophaeus.scaffold280                      23932061 14 -  24302211 G---C----CACCGAGTAGAA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346239 14 +    752769 G---C----CACCGAGTAGAA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15600  5 +    737560 A---C----GAC---------
i Manis_javanica.JSZB01003497.1                          C 0 T 62
s Manis_pentadactyla.KN006162.1                              46989  5 -    317179 A---T----CAC---------
i Manis_pentadactyla.KN006162.1                          C 0 T 62
s Marmota_marmota.CZRN01000018.1                          33097427  5 -  40650429 a---t----CAT---------
i Marmota_marmota.CZRN01000018.1                         C 0 T 59
s Megaderma_lyra.MegLyr_scaffold_4542                         6770  5 -    207569 A---T----CAT---------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 T 45
s Mellivora_capensis.MelCap_flattened_line_69365              6229  5 +     13704 A---T----CAC---------
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 T 65
s Mesoplodon_bidens.MesBid_scaffold_108144                    3059  5 +     10310 A---T----CAC---------
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 T 64
s Microcebus_murinus.CM007674.1                           18283319  5 -  93316391 A---T----CAC---------
i Microcebus_murinus.CM007674.1                          C 0 T 64
s Micronycteris_hirsuta.MicHir_scaffold_52381                13414  5 -     19307 A---T----CAC---------
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 T 64
s Miniopterus_natalensis.LDJU01000034.1                    1849088  5 +   8254450 A---T----CAC---------
i Miniopterus_natalensis.LDJU01000034.1                  C 0 T 64
s Miniopterus_schreibersii.MinSch_scaffold_18080             32964  5 +     64694 A---T----CAC---------
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 T 64
s Miopithecus_ogouensis.k141_534055                           3796 14 -     28506 G---T----CACCGAGTAGAA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62428  5 -     63350 A---T----CAC---------
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 T 65
s Mirza_zaza.k141_952172                                      4673  5 -     37649 A---T----CAC---------
i Mirza_zaza.k141_952172                                 C 0 T 63
s Monodon_monoceros.MonMon_M_scaffold_103                    26564  5 -    437263 A---T----CAC---------
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 T 64
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137820  5 -    366855 G---T----TAC---------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 T 64
s Moschus_moschiferus.MosMos_scaffold_61429                  27415  5 -     27816 A---T----CAC---------
i Moschus_moschiferus.MosMos_scaffold_61429              C 0 T 64
s Murina_feae.MurFea_scaffold_85699                           5114  5 +     14753 A---T----TCC---------
i Murina_feae.MurFea_scaffold_85699                      C 0 T 58
s Muscardinus_avellanarius.MusAve_scaffold_82313              2335  5 +     14296 A---T----CAC---------
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 T 58
s Mustela_putorius.JH418006.1                               297660  5 -  14710649 A---T----CAC---------
i Mustela_putorius.JH418006.1                            C 0 T 65
s Myotis_brandtii.KE162005.1                                278284  5 -  10118263 A---T----CCC---------
i Myotis_brandtii.KE162005.1                             C 0 T 53
s Myotis_davidii.KB100139.1                                1585841  5 -   6019432 A---T----CCT---------
i Myotis_davidii.KB100139.1                              C 0 T 53
s Myotis_lucifugus.GL429869.1                              3902050  5 -   4330536 A---T----CCC---------
i Myotis_lucifugus.GL429869.1                            C 0 T 53
s Myotis_myotis.MyoMyo_scaffold_28916                        32609  5 +     33610 A---T----CCC---------
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 T 53
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186100  5 +    196477 A---T----CAT---------
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 T 63
s Nannospalax_galili.KL204047.1                            2025503  5 -   3037898 A---G----CAC---------
i Nannospalax_galili.KL204047.1                          C 0 T 59
s Nasalis_larvatus.k141_413338                                9809 14 +     21681 G---T----CACCGAGTAGAA
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865520  5 +   7148211 A---T----CAC---------
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 T 64
s Noctilio_leporinus.NocLep_scaffold_251                    756384  5 +    783361 G---T----CAC---------
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 T 63
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145976  5 -   9404916 A---A----CAC---------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 T 65
s Nycticebus_bengalensis.LG01                            102574491  5 - 196305487 A---T----CAC---------
i Nycticebus_bengalensis.LG01                            C 0 T 59
s Nycticebus_coucang.k141_5327727                             2177  5 +      8486 A---T----CAC---------
i Nycticebus_coucang.k141_5327727                        C 0 T 59
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744918  5 + 199412804 A---T----CAC---------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 T 59
s Ochotona_princeps.JH802162.1                             1355744  5 +   3988456 A---T----TAC---------
i Ochotona_princeps.JH802162.1                           C 0 T 52
s Odobenus_rosmarus.KB229312.1                              500717  5 -   2017862 A---T----CAC---------
i Odobenus_rosmarus.KB229312.1                           C 0 T 65
s Odocoileus_virginianus.KZ100018.1                         144647  5 +    630418 A---T----CAC---------
i Odocoileus_virginianus.KZ100018.1                      C 0 T 63
s Orcinus_orca.KB316932.1                                  2781435  5 -  10937097 A---T----CAC---------
i Orcinus_orca.KB316932.1                                C 0 T 64
s Orycteropus_afer.OryAfe_flattened_line_144387               6833  5 -     18566 G---C----CAC---------
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 T 64
s Otocyon_megalotis.JAEUCK010005147.1                       458730  5 -    559221 A---A----CAC---------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 T 65
s Ovis_aries.CM001607.2                                   17585006  5 +  44047080 A---T----CAC---------
i Ovis_aries.CM001607.2                                  C 0 T 64
s Ovis_canadensis.OviCan_scaffold_2572                      173427  5 -    191736 A---T----CAC---------
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 T 64
s Pan_paniscus.KQ411613.1                                    38527 14 +     80009 g---t----caccgagtagaa
i Pan_paniscus.KQ411613.1                                I 2335 C 0
s Pan_troglodytes.NBAG03001836.1                             24368 17 +     51860 gtcat----cactgagtagaa
i Pan_troglodytes.NBAG03001836.1                         T 17 T 17
s Pantholops_hodgsonii.KE114653.1                          1264360  5 -   2937107 A---T----CAC---------
i Pantholops_hodgsonii.KE114653.1                        C 0 T 64
s Papio_anubis.CM001495.2                                183437383 14 + 183742232 G---T----CACCGAGTAGAA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1541 14 +     20448 G---T----CACCGAGTAGAA
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20558067 14 +  20919399 G---C----CACCGAGTAGAA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                    284 14 +     41871 G---T----CACCGAGTAGAA
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     3570 14 +     27711 G---T----CACCGAGTAGAA
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  3469 14 +      9205 G---C----CACCGAGTAGAA
i Papio_ursinus.k141_3428135                             C 0 C 0
s Perodicticus_ibeanus.k141_855320                            4673  5 +     13100 G---T----CAC---------
i Perodicticus_ibeanus.k141_855320                       C 0 T 64
s Perodicticus_potto.k141_1092580                             3041  5 +     25941 G---T----CAC---------
i Perodicticus_potto.k141_1092580                        C 0 T 64
s Petromus_typicus.PetTyp_scaffold_42190                     25840  5 -     29689 A---T----CAC---------
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 T 63
s Phocoena_phocoena.PhoPho_flattened_line_24159               8482  5 +     63832 A---T----CAC---------
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 T 64
s Piliocolobus_badius.k141_1234363                           38325 14 +     62158 G---T----CACCGAGTAGAA
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33052 14 +     89929 G---T----CACCGAGTAGAA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34468 14 +     51399 G---T----CACCGAGTAGAA
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290689 14 -  14605196 G---T----CACCGAGTAGAA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              434  5 +     22620 A---T----CCC---------
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 T 64
s Platanista_gangetica.PlaMin_flattened_line_32310           34188  5 +     35617 A---T----CAC---------
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 T 64
s Pongo_abelii.CM009266.2                                189125230 14 + 189387572 G---T----CACTGAGTAGAA
i Pongo_abelii.CM009266.2                                C 0 I 307
s Pongo_pygmaeus.ctg66                                     9565140 14 +   9816681 G---T----CACTGAGTAGAA
i Pongo_pygmaeus.ctg66                                   T 206 C 0
s Presbytis_comata.k141_677006                               67969 14 -     81375 G---T----CACCGAGTAGAA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9796 14 +     10147 G---T----CACCGAGTAGAA
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9996  5 -     22811 G---T----CAC---------
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 T 64
s Propithecus_coquerelli.NW_012148875.1                     986370  5 +   2598838 A---T----CAC---------
i Propithecus_coquerelli.NW_012148875.1                  C 0 T 61
s Propithecus_coronatus.k141_347390                          24659  5 +     38485 A---T----CAC---------
i Propithecus_coronatus.k141_347390                      C 0 T 61
s Propithecus_diadema.k141_357118                              820  5 +      4256 A---T----CAC---------
i Propithecus_diadema.k141_357118                        C 0 T 61
s Propithecus_edwardsi.k141_1176054                          22178  5 +     35766 A---T----CAC---------
i Propithecus_edwardsi.k141_1176054                      C 0 T 61
s Propithecus_perrieri.k141_1200571                            361  5 -     24134 A---T----CAC---------
i Propithecus_perrieri.k141_1200571                      C 0 T 61
s Propithecus_tattersalli.k141_790011                        24173  5 -     67325 A---T----CAC---------
i Propithecus_tattersalli.k141_790011                    C 0 T 61
s Propithecus_verreauxi.k141_956661                            418  5 -      6182 A---T----CAC---------
i Propithecus_verreauxi.k141_956661                      C 0 T 61
s Pteronotus_parnellii.KE909381.1                            11202  5 -     21811 A---T----CAC---------
i Pteronotus_parnellii.KE909381.1                        C 0 T 64
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36671  5 +     42204 A---T----CAC---------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 T 65
s Pteropus_alecto.KB030862.1                              22973678  5 +  28871421 T---T----CAC---------
i Pteropus_alecto.KB030862.1                             C 0 T 62
s Pteropus_vampyrus.KN534172.1                                1615  5 -      8028 T---T----CAC---------
i Pteropus_vampyrus.KN534172.1                           C 0 T 62
s Pygathrix_cinerea.k141_1153803                              9798 14 -     91421 G---T----CACCGAGTAGAA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603932 14 +   7812017 G---T----CACCGAGTAGAA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9771 14 -     72585 G---T----CACCGAGTAGAA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4895  5 +     55207 A---T----CAC---------
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 T 63
s Rhinolophus_sinicus.LVEH01000134.1                        366913  5 -   3329780 A---T----CAC---------
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 T 64
s Rhinopithecus_bieti.k119_217274                             1484 14 -     11128 g---t----caccaagtagaa
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230841 14 - 195417433 g---t----caccgagtagaa
i Rhinopithecus_roxellana.NC_044550.1                    I 40 C 0
s Rhinopithecus_strykeri.ctg102                            7666489 14 +   7961872 g---c----cgccgagtagaa
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84664  5 -     96226 T---T----CAT---------
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 T 63
s Saiga_tatarica.SaiTat_scaffold_373180                       3548  5 +      4321 A---T----CAC---------
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 T 63
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151361  5 -    313613 A---T----CAA---------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 T 30
s Semnopithecus_entellus.k141_11662                          14313 14 -     19888 G---T----CACCGAGTAGAA
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21518 14 +     39453 G---T----CACCGAGTAGAA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2042 14 +     27826 G---T----CACCGAGTAGAA
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1564 14 -     19483 G---T----CACCGAGTAGAA
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1626 14 +      7198 G---T----CACCGAGTAGAA
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9886 14 +     15514 G---T----CACCGAGTAGAA
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187685  5 -    191337 A---T----CAC---------
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 T 64
s Sorex_araneus.JH798187.1                                13647015  5 -  18376816 A---T----CAA---------
i Sorex_araneus.JH798187.1                               C 0 T 48
s Spermophilus_dauricus.KZ294078.1                         1948219  5 -   3870691 a---t----CAT---------
i Spermophilus_dauricus.KZ294078.1                       C 0 T 59
s Spilogale_gracilis.SpiGra_flattened_line_13525             27213  5 +     97271 A---T----CAC---------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 T 65
s Sus_scrofa.CM000828.4                                   62882454  5 -  69701581 A---T----CAC---------
i Sus_scrofa.CM000828.4                                  C 0 T 51
s Symphalangus_syndactylus.tarseq_199                      1087862 14 -   1523678 G---T----CACCGAGTAGAA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6817  5 +     41958 A---T----CAC---------
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 T 63
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69462  5 +    116680 A---T----CAT---------
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 T 63
s Tapirus_indicus.TapInd_scaffold_9301                      115200  5 -    156842 A---T----CAC---------
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 T 64
s Tapirus_terrestris.TapTer_scaffold_755                    383655  5 +    539355 A---T----CAC---------
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 T 64
s Tarsius_lariang.k141_2201908                               10649  5 +     70052 A---A----CCC---------
i Tarsius_lariang.k141_2201908                           C 0 T 65
s Tarsius_wallacei.k141_780063                               14954  5 +     25099 A---A----CCC---------
i Tarsius_wallacei.k141_780063                           C 0 T 65
s Theropithecus_gelada.CM009954.1                        186422892 14 + 186847797 G---C----CACCGAGTAGAA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103181  5 +    114563 A---T----CAT---------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 T 63
s Tolypeutes_matacus.TolMat_scaffold_228639                   1850  3 +      8208 A---T----C-----------
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 T 47
s Tonatia_saurophila.TonSau_scaffold_294                     78958  5 +    610378 A---C----CAC---------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 T 64
s Trachypithecus_auratus.k141_722599                          5623 11 -     20410 G---T----CACCG---AGAA
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9815 14 +     15221 G---T----CACCGAGTAGAA
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5723 11 +     19930 G---T----CACCG---AGAA
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2150 14 -     19997 G---T----CACCGAGTAGAA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42269 14 -     60166 G---T----CACCGAGTAGAA
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9741 14 -     27529 G---T----CACCGAGTAGAA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9681 14 -     18194 G---T----CACCGAGTAGAA
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3417 14 -     21137 G---T----CACCGAGTAGAA
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2119 14 -     10723 G---T----CACCGAGTAGAA
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1272 14 +      9834 G---T----CACCGAGTAGAA
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19590 14 +     32220 G---T----CACCGAGTAGAA
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933687 14 +   6242583 G---T----CACCGAGTAGAA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2932 14 +     20839 G---T----CACCGAGTAGAA
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    665  5 -      1748 A---T----CAC---------
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 T 55
s Tupaia_chinensis.KB320699.1                              2149612  5 +   4065304 A---C----CAC---------
i Tupaia_chinensis.KB320699.1                            C 0 T 91
s Tupaia_tana.TupTan_flattened_line_97126                     3203  5 -     10553 A---T----CAC---------
i Tupaia_tana.TupTan_flattened_line_97126                C 0 T 63
s Tursiops_truncatus.MRVK01000835.1                       15737682  5 +  33153633 A---T----CAC---------
i Tursiops_truncatus.MRVK01000835.1                      C 0 T 64
s Uropsilus_gracilis.UroGra_scaffold_97021                    1913  5 -      4736 A---T----CAC---------
i Uropsilus_gracilis.UroGra_scaffold_97021               C 0 T 64
s Ursus_maritimus.KK499267.1                               4846914  5 -   5085361 A---T----CAC---------
i Ursus_maritimus.KK499267.1                             C 0 T 65
s Vicugna_pacos.KN270157.1                                 5368386  5 -   5488506 A---T----CAC---------
i Vicugna_pacos.KN270157.1                               C 0 T 64
s Vulpes_lagopus.VulLag_flattened_line_30954                  7391  5 -     43706 A---A----CAC---------
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 T 65
s Xerus_inauris.XerIna_scaffold_48378                        19714  5 -     24430 A---T----CAT---------
i Xerus_inauris.XerIna_scaffold_48378                    C 0 T 59
s Zalophus_californianus.ZalCal_flattened_line_63728          1839  5 +      2932 A---T----CAC---------
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 T 65
s Zapus_hudsonius.ZapHud_scaffold_11398                       9996  5 +     63895 A---G----CAC---------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 T 64
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11374  5 +     12536 A---T----CAC---------
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 T 64
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Suricata_suricatta.SurSur_flattened_line_6629              14217 57 -    196729 T
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Puma_concolor.QAVW01001104.1                            20270299 57 -  38429054 T
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25316 19 +     32600 T
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8867 57 -     78924 T
e Panthera_tigris.KE722367.1                               4716988 57 -   8748460 T
e Panthera_pardus.KV860321.1                                259841 57 +  18783137 T
e Panthera_onca.PanOnc_flattened_line_3271                  147132 57 +    230217 T
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mungos_mungo.MunMun_flattened_line_23663                   31348 57 +     37127 T
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    15418  9 -    145209 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  40612 57 +     55795 T
e Helogale_parvula.HelPar_flattened_line_2585               238147 57 +    327341 T
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Felis_nigripes.FelNig_flattened_line_20823                  5510 57 -     36744 T
e Felis_catus_fca126.CM031415.1                           20191985 57 + 205367284 T
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             24230 57 -     87169 T
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           823285 57 -   1699592 T

a score=0.000000
s hg38.chrUn_KI270753v1                                       1051 2 +     62944 CC
s Allenopithecus_nigroviridis.k141_3361533                    9317 2 -     52922 CC
i Allenopithecus_nigroviridis.k141_3361533               C 0 T 70
s Allochrocebus_lhoesti.k141_4309873                          9244 2 -     28001 CC
i Allochrocebus_lhoesti.k141_4309873                     C 0 T 70
s Allochrocebus_preussi.k141_310680                           9370 2 -      9772 CC
i Allochrocebus_preussi.k141_310680                      C 0 T 70
s Allochrocebus_solatus.k141_166128                            527 2 -     12518 CC
i Allochrocebus_solatus.k141_166128                      C 0 T 70
s Cercocebus_atys.KQ010504.1                               4470288 2 +   4669795 CC
i Cercocebus_atys.KQ010504.1                             C 0 T 70
s Cercocebus_chrysogaster.k141_393940                         8837 2 -     19203 CC
i Cercocebus_chrysogaster.k141_393940                    C 0 T 70
s Cercocebus_lunulatus.k141_3846941                           3256 2 +      8260 CC
i Cercocebus_lunulatus.k141_3846941                      C 0 T 70
s Cercocebus_torquatus.k141_3057011                           3486 2 +     27781 CC
i Cercocebus_torquatus.k141_3057011                      C 0 T 70
s Cercopithecus_ascanius.k141_1024104                         3632 2 -     20310 CC
i Cercopithecus_ascanius.k141_1024104                    C 0 T 70
s Cercopithecus_cephus.k141_1078548                           6616 2 +     29689 CC
i Cercopithecus_cephus.k141_1078548                      C 0 T 70
s Cercopithecus_diana.k141_2427854                             969 2 +      9989 CC
i Cercopithecus_diana.k141_2427854                       C 0 T 70
s Cercopithecus_hamlyni.k141_187466                           9304 2 -     27936 CC
i Cercopithecus_hamlyni.k141_187466                      C 0 T 70
s Cercopithecus_lowei.k141_457449                             9323 2 -     11289 CC
i Cercopithecus_lowei.k141_457449                        C 0 T 70
s Cercopithecus_albogularis.ctg5                                38811699 2 +  39242232 CC
i Cercopithecus_albogularis.ctg5                               C 0 T 70
s Cercopithecus_mona.ctg39                                21217390 2 -  21565898 CC
i Cercopithecus_mona.ctg39                               C 0 T 70
s Cercopithecus_neglectus.k141_2526306                       34510 2 -     53127 CC
i Cercopithecus_neglectus.k141_2526306                   C 0 T 70
s Cercopithecus_nictitans.k141_3278028                        1802 2 +      7159 CC
i Cercopithecus_nictitans.k141_3278028                   C 0 T 70
s Cercopithecus_petaurista.k141_807961                        9315 2 -     27947 CC
i Cercopithecus_petaurista.k141_807961                   C 0 T 70
s Cercopithecus_pogonias.k141_822820                          9291 2 +     17596 CC
i Cercopithecus_pogonias.k141_822820                     C 0 T 70
s Cercopithecus_roloway.k141_3180641                         39785 2 -     41420 CC
i Cercopithecus_roloway.k141_3180641                     C 0 T 70
s Chlorocebus_aethiops.ctg25                              18423254 2 -  18827391 CC
i Chlorocebus_aethiops.ctg25                             C 0 T 70
s Chlorocebus_pygerythrus.k141_1025673                        9697 2 -     50209 CC
i Chlorocebus_pygerythrus.k141_1025673                   C 0 T 70
s Chlorocebus_sabaeus.CM001947.1                         135416702 2 + 135778131 CC
i Chlorocebus_sabaeus.CM001947.1                         C 0 T 70
s Colobus_angolensis.KN981557.1                            1905231 2 +   2368649 CC
i Colobus_angolensis.KN981557.1                          C 0 T 70
s Colobus_guereza.LG01                                   199944901 2 + 200372422 CC
i Colobus_guereza.LG01                                   C 0 T 122
s Colobus_polykomos.k141_906115                              31770 2 +     84244 CC
i Colobus_polykomos.k141_906115                          C 0 T 97
s Erythrocebus_patas.Contig38                             21199933 2 -  21539334 CC
i Erythrocebus_patas.Contig38                            C 0 T 70
s Gorilla_beringei.k141_3596273                              10422 2 -     32273 CC
i Gorilla_beringei.k141_3596273                          T 140 I 70
s Gorilla_gorilla.LT578341.1                             186332572 2 + 186649187 CC
i Gorilla_gorilla.LT578341.1                             T 140 I 70
s Hoolock_leuconedys.ctg274                                    429261 2 +    630532 CC
i Hoolock_leuconedys.ctg274                                 T 203 I 136
s Hylobates_agilis.k141_307679                               12179 2 -     15490 CC
i Hylobates_agilis.k141_307679                           C 0 I 136
s Hylobates_klossii.k141_282416                              54184 2 +     67168 CC
i Hylobates_klossii.k141_282416                          C 0 I 136
s Hylobates_pileatus_b.LG02                                     189537836 2 - 191637585 CC
i Hylobates_pileatus_b.LG02                                     C 0 I 136
s Hylobates_pileatus_a.tarseq_633                            3330729 2 -  11177569 CC
i Hylobates_pileatus_a.tarseq_633                          C 0 I 136
s Lophocebus_aterrimus.ctg367                              1431459 2 +   1826925 CC
i Lophocebus_aterrimus.ctg367                            C 0 T 71
s Macaca_arctoides.k141_2326796                               1643 2 +     40492 CC
i Macaca_arctoides.k141_2326796                          C 0 T 70
s Macaca_assamensis.Contig5                               59670903 2 +  60120075 CC
i Macaca_assamensis.Contig5                              C 0 T 70
s Macaca_cyclopis.k119_18836                                  7401 2 -     26193 CC
i Macaca_cyclopis.k119_18836                             C 0 T 70
s Macaca_fascicularis.k141_814140                            75195 2 -    114318 CC
i Macaca_fascicularis.k141_814140                        C 0 T 70
s Macaca_fuscata.k119_255327                                   914 2 -     23192 CC
i Macaca_fuscata.k119_255327                             C 0 T 70
s Macaca_leonina.k141_3550399                                10367 2 -     29190 CC
i Macaca_leonina.k141_3550399                            C 0 T 70
s Macaca_maura.k141_2733130                                  18934 2 +     37952 CC
i Macaca_maura.k141_2733130                              C 0 T 70
s Macaca_mulatta.NC_041758.1                             186834022 2 + 187317192 CC
i Macaca_mulatta.NC_041758.1                             C 0 T 70
s Macaca_nemestrina.KQ007038.1                            25452583 2 -  25927173 CC
i Macaca_nemestrina.KQ007038.1                           C 0 T 70
s Macaca_nigra.k141_1655396                                  74783 2 +     89720 CC
i Macaca_nigra.k141_1655396                              C 0 T 70
s Macaca_radiata.k141_3680011                                 1780 2 +     20474 CC
i Macaca_radiata.k141_3680011                            C 0 T 70
s Macaca_siberu.k141_635500                                   1581 2 -     14993 CC
i Macaca_siberu.k141_635500                              C 0 T 70
s Macaca_silenus.Contig273                                  324454 2 -    668171 CC
i Macaca_silenus.Contig273                               C 0 T 70
s Macaca_thibetana.k99_7456                                  15723 2 -     15935 CC
i Macaca_thibetana.k99_7456                              C 0 T 70
s Macaca_tonkeana.k141_1498238                               20520 2 -     45290 CC
i Macaca_tonkeana.k141_1498238                           C 0 T 70
s Mandrillus_leucophaeus.scaffold280                      23932075 2 -  24302211 CC
i Mandrillus_leucophaeus.scaffold280                     C 0 T 70
s Mandrillus_sphinx.Contig270                               346253 2 +    752769 CC
i Mandrillus_sphinx.Contig270                            C 0 T 70
s Miopithecus_ogouensis.k141_534055                           3810 2 -     28506 CC
i Miopithecus_ogouensis.k141_534055                      C 0 T 70
s Nasalis_larvatus.k141_413338                                9823 2 +     21681 CC
i Nasalis_larvatus.k141_413338                           C 0 T 70
s Pan_paniscus.KQ411613.1                                    38541 2 +     80009 cc
i Pan_paniscus.KQ411613.1                                C 0 T 67
s Pan_troglodytes.CM009242.2                             189137366 2 + 189151597 cc
i Pan_troglodytes.CM009242.2                             I 14 I 139
s Papio_anubis.CM001495.2                                183437397 2 + 183742232 CC
i Papio_anubis.CM001495.2                                C 0 T 70
s Papio_cynocephalus.k141_4307930                             1555 2 +     20448 CC
i Papio_cynocephalus.k141_4307930                        C 0 T 163
s Papio_hamadryas.Contig39                                20558081 2 +  20919399 CC
i Papio_hamadryas.Contig39                               C 0 T 70
s Papio_kindae.k141_1936966                                    298 2 +     41871 CC
i Papio_kindae.k141_1936966                              C 0 T 163
s Papio_papio.k141_802527                                     3584 2 +     27711 CC
i Papio_papio.k141_802527                                C 0 T 54
s Papio_ursinus.k141_3428135                                  3483 2 +      9205 CC
i Papio_ursinus.k141_3428135                             C 0 T 70
s Piliocolobus_badius.k141_1234363                           38339 2 +     62158 CC
i Piliocolobus_badius.k141_1234363                       C 0 T 70
s Piliocolobus_gordonorum.k141_381342                        33066 2 +     89929 CC
i Piliocolobus_gordonorum.k141_381342                    C 0 T 70
s Piliocolobus_kirkii.k141_448987                            34482 2 +     51399 CC
i Piliocolobus_kirkii.k141_448987                        C 0 T 70
s Piliocolobus_tephrosceles.PDMG02000141.1                14290703 2 -  14605196 CC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 T 70
s Pongo_abelii.CM009266.2                                189125551 2 + 189387572 CC
i Pongo_abelii.CM009266.2                                I 307 I 136
s Pongo_pygmaeus.ctg66                                     9565154 2 +   9816681 CC
i Pongo_pygmaeus.ctg66                                   C 0 I 137
s Presbytis_comata.k141_677006                               67983 2 -     81375 CC
i Presbytis_comata.k141_677006                           C 0 T 70
s Presbytis_mitrata.k141_2342859                              9810 2 +     10147 CC
i Presbytis_mitrata.k141_2342859                         C 0 T 70
s Pygathrix_cinerea.k141_1153803                              9812 2 -     91421 CC
i Pygathrix_cinerea.k141_1153803                         C 0 T 70
s Pygathrix_nigripes_b.ctg100                                 7603946 2 +   7812017 CC
i Pygathrix_nigripes_b.ctg100                               C 0 T 70
s Pygathrix_nigripes_a.k141_215492                              9785 2 -     72585 CC
i Pygathrix_nigripes_a.k141_215492                         C 0 T 70
s Rhinopithecus_bieti.k119_217274                             1498 2 -     11128 cc
i Rhinopithecus_bieti.k119_217274                        C 0 T 370
s Rhinopithecus_roxellana.NC_044550.1                     91230855 2 - 195417433 cc
i Rhinopithecus_roxellana.NC_044550.1                    C 0 T 350
s Rhinopithecus_strykeri.ctg102                            7666503 2 +   7961872 cc
i Rhinopithecus_strykeri.ctg102                          C 0 T 290
s Semnopithecus_entellus.k141_11662                          14327 2 -     19888 CC
i Semnopithecus_entellus.k141_11662                      C 0 T 70
s Semnopithecus_hypoleucos.k141_1615806                      21532 2 +     39453 CC
i Semnopithecus_hypoleucos.k141_1615806                  C 0 T 70
s Semnopithecus_johnii.k141_670120                            2056 2 +     27826 CC
i Semnopithecus_johnii.k141_670120                       C 0 T 70
s Semnopithecus_priam.k141_638794                             1578 2 -     19483 CC
i Semnopithecus_priam.k141_638794                        C 0 T 70
s Semnopithecus_schistaceus.k141_1584426                      1640 2 +      7198 CC
i Semnopithecus_schistaceus.k141_1584426                 C 0 T 70
s Semnopithecus_vetulus.k141_1200928                          9900 2 +     15514 CC
i Semnopithecus_vetulus.k141_1200928                     C 0 T 70
s Symphalangus_syndactylus.tarseq_199                      1087876 2 -   1523678 CC
i Symphalangus_syndactylus.tarseq_199                    C 0 I 137
s Theropithecus_gelada.CM009954.1                        186422906 2 + 186847797 CC
i Theropithecus_gelada.CM009954.1                        C 0 T 70
s Trachypithecus_auratus.k141_722599                          5634 2 -     20410 CC
i Trachypithecus_auratus.k141_722599                     C 0 T 67
s Trachypithecus_crepusculus.k141_1194022                     9829 2 +     15221 CC
i Trachypithecus_crepusculus.k141_1194022                C 0 T 70
s Trachypithecus_cristatus.k141_580354                        5734 2 +     19930 CC
i Trachypithecus_cristatus.k141_580354                   C 0 T 67
s Trachypithecus_francoisi.k141_1412647                       2164 2 -     19997 CC
i Trachypithecus_francoisi.k141_1412647                  C 0 T 70
s Trachypithecus_geei.k141_277701                            42283 2 -     60166 CC
i Trachypithecus_geei.k141_277701                        C 0 T 70
s Trachypithecus_germaini.k141_912491                         9755 2 -     27529 CC
i Trachypithecus_germaini.k141_912491                    C 0 T 70
s Trachypithecus_hatinhensis.k141_143409                      9695 2 -     18194 CC
i Trachypithecus_hatinhensis.k141_143409                 C 0 T 70
s Trachypithecus_laotum.k141_907409                           3431 2 -     21137 CC
i Trachypithecus_laotum.k141_907409                      C 0 T 70
s Trachypithecus_leucocephalus.k141_587342                    2133 2 -     10723 CC
i Trachypithecus_leucocephalus.k141_587342               C 0 T 70
s Trachypithecus_melamera.k141_434728                         1286 2 +      9834 CC
i Trachypithecus_melamera.k141_434728                    C 0 T 70
s Trachypithecus_obscurus.k141_190785                        19604 2 +     32220 CC
i Trachypithecus_obscurus.k141_190785                    C 0 T 70
s Trachypithecus_phayrei.ctg124                            5933701 2 +   6242583 CC
i Trachypithecus_phayrei.ctg124                          C 0 T 70
s Trachypithecus_pileatus.k141_2007326                        2946 2 +     20839 CC
i Trachypithecus_pileatus.k141_2007326                   C 0 T 70
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Loris_tardigradus.ctg83                                   999528 60 +   6120653 T
e Loris_lydekkerianus.k141_2539221                             692 59 +     11245 T
e Perodicticus_potto.k141_1092580                             3046 64 +     25941 T
e Perodicticus_ibeanus.k141_855320                            4678 64 +     13100 T
e Ziphius_cavirostris.ZipCav_flattened_line_71469            11379 64 +     12536 T
e Zapus_hudsonius.ZapHud_scaffold_11398                      10001 64 +     63895 T
e Zalophus_californianus.ZalCal_flattened_line_63728          1844 65 +      2932 T
e Xerus_inauris.XerIna_scaffold_48378                        19719 59 -     24430 T
e Vulpes_lagopus.VulLag_flattened_line_30954                  7396 65 -     43706 T
e Vicugna_pacos.KN270157.1                                 5368391 64 -   5488506 T
e Varecia_variegata.k141_1128296                              7155 0 +     24756 C
e Varecia_rubra.k141_590885                                   7107 0 +     50397 C
e Ursus_maritimus.KK499267.1                               4846919 65 -   5085361 T
e Uropsilus_gracilis.UroGra_scaffold_97021                    1918 64 -      4736 T
e Tursiops_truncatus.MRVK01000835.1                       15737687 64 +  33153633 T
e Tupaia_tana.TupTan_flattened_line_97126                     3208 63 -     10553 T
e Tupaia_chinensis.KB320699.1                              2149617 91 +   4065304 T
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                    670 55 -      1748 T
e Tonatia_saurophila.TonSau_scaffold_294                     78963 64 +    610378 T
e Tolypeutes_matacus.TolMat_scaffold_228639                   1853 47 +      8208 T
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103186 63 +    114563 T
e Tarsius_wallacei.k141_780063                               14959 65 +     25099 T
e Tarsius_lariang.k141_2201908                               10654 65 +     70052 T
e Tapirus_terrestris.TapTer_scaffold_755                    383660 64 +    539355 T
e Tapirus_indicus.TapInd_scaffold_9301                      115205 64 -    156842 T
e Tamandua_tetradactyla.TamTet_scaffold_1782                 69467 63 +    116680 T
e Tadarida_brasiliensis.TadBra_scaffold_25820                 6822 63 +     41958 T
e Sus_scrofa.CM000828.4                                   62882459 51 -  69701581 T
e Suricata_suricatta.SurSur_flattened_line_6629              14217 57 -    196729 T
e Spilogale_gracilis.SpiGra_flattened_line_13525             27218 65 +     97271 T
e Spermophilus_dauricus.KZ294078.1                         1948224 59 -   3870691 T
e Sorex_araneus.JH798187.1                                13647020 48 -  18376816 T
e Solenodon_paradoxus.SolPar_flattened_line_5840            187690 64 -    191337 T
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    151366 30 -    313613 T
e Saiga_tatarica.SaiTat_scaffold_373180                       3553 63 +      4321 T
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                84669 63 -     96226 T
e Rhinolophus_sinicus.LVEH01000134.1                        366918 64 -   3329780 T
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4900 63 +     55207 T
e Puma_concolor.QAVW01001104.1                            20270299 57 -  38429054 T
e Pteropus_vampyrus.KN534172.1                                1620 62 -      8028 T
e Pteropus_alecto.KB030862.1                              22973683 62 +  28871421 T
e Pteronura_brasiliensis.PteBra_flattened_line_31117         36676 65 +     42204 T
e Pteronotus_parnellii.KE909381.1                            11207 64 -     21811 T
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Propithecus_verreauxi.k141_956661                            423 61 -      6182 T
e Propithecus_tattersalli.k141_790011                        24178 61 -     67325 T
e Propithecus_perrieri.k141_1200571                            366 61 -     24134 T
e Propithecus_edwardsi.k141_1176054                          22183 61 +     35766 T
e Propithecus_diadema.k141_357118                              825 61 +      4256 T
e Propithecus_coronatus.k141_347390                          24664 61 +     38485 T
e Propithecus_coquerelli.NW_012148875.1                     986375 61 +   2598838 T
e Prolemur_simus.MPIZ01000396.1                            2592414 0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10001 64 -     22811 T
e Platanista_gangetica.PlaMin_flattened_line_32310           34193 64 +     35617 T
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              439 64 +     22620 T
e Phocoena_phocoena.PhoPho_flattened_line_24159               8487 64 +     63832 T
e Petromus_typicus.PetTyp_scaffold_42190                     25845 63 -     29689 T
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25316 19 +     32600 T
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8867 57 -     78924 T
e Pantholops_hodgsonii.KE114653.1                          1264365 64 -   2937107 T
e Panthera_tigris.KE722367.1                               4716988 57 -   8748460 T
e Panthera_pardus.KV860321.1                                259841 57 +  18783137 T
e Panthera_onca.PanOnc_flattened_line_3271                  147132 57 +    230217 T
e Ovis_canadensis.OviCan_scaffold_2572                      173432 64 -    191736 T
e Ovis_aries.CM001607.2                                   17585011 64 +  44047080 T
e Otocyon_megalotis.JAEUCK010005147.1                       458735 65 -    559221 T
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               6838 64 -     18566 T
e Orcinus_orca.KB316932.1                                  2781440 64 -  10937097 T
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144652 63 +    630418 T
e Odobenus_rosmarus.KB229312.1                              500722 65 -   2017862 T
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1355749 52 +   3988456 T
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744923 59 + 199412804 T
e Nycticebus_coucang.k141_5327727                             2182 59 +      8486 T
e Nycticebus_bengalensis.LG01                            102574496 59 - 196305487 T
e Nyctereutes_procyonoides.CAJHUB010000658.1               9145981 65 -   9404916 T
e Noctilio_leporinus.NocLep_scaffold_251                    756389 63 +    783361 T
e Neophocaena_asiaeorientalis.KZ687982.1                   5865525 64 +   7148211 T
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.KL204047.1                            2025508 59 -   3037898 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186105 63 +    196477 T
e Myotis_myotis.MyoMyo_scaffold_28916                        32614 53 +     33610 T
e Myotis_lucifugus.GL429869.1                              3902055 53 -   4330536 T
e Myotis_davidii.KB100139.1                                1585846 53 -   6019432 T
e Myotis_brandtii.KE162005.1                                278289 53 -  10118263 T
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               297665 65 -  14710649 T
e Muscardinus_avellanarius.MusAve_scaffold_82313              2340 58 +     14296 T
e Murina_feae.MurFea_scaffold_85699                           5119 58 +     14753 T
e Mungos_mungo.MunMun_flattened_line_23663                   31348 57 +     37127 T
e Moschus_moschiferus.MosMos_scaffold_61429                  27420 64 -     27816 T
e Mormoops_blainvillei.MorMeg_scaffold_1417                 137825 64 -    366855 T
e Monodon_monoceros.MonMon_M_scaffold_103                    26569 64 -    437263 T
e Mirza_zaza.k141_952172                                      4678 63 -     37649 T
e Mirounga_angustirostris.MirAng_flattened_line_22144        62433 65 -     63350 T
e Miniopterus_schreibersii.MinSch_scaffold_18080             32969 64 +     64694 T
e Miniopterus_natalensis.LDJU01000034.1                    1849093 64 +   8254450 T
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                13419 64 -     19307 T
e Microgale_talazaci.MicTal_scaffold_6613                    15418 9 -    145209 I
e Microcebus_murinus.CM007674.1                           18283324 64 -  93316391 T
e Mesoplodon_bidens.MesBid_scaffold_108144                    3064 64 +     10310 T
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365              6234 65 +     13704 T
e Megaderma_lyra.MegLyr_scaffold_4542                         6775 45 -    207569 T
e Marmota_marmota.CZRN01000018.1                          33097432 59 -  40650429 T
e Manis_pentadactyla.KN006162.1                              46994 62 -    317179 T
e Manis_javanica.JSZB01003497.1                              15605 62 +    737560 T
e Macroglossus_sobrinus.MacSob_scaffold_8222                 87560 62 +     94391 T
e Lycaon_pictus.CM007581.1                                17951720 65 -  59628241 T
e Loxodonta_africana.GL010049.1                            4214513 64 -  43346337 T
e Lipotes_vexillifer.KE559953.1                             267474 61 -    662738 T
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3036103 65 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      22800 64 +     54090 T
e Lepilemur_ruficaudatus.k141_420445                         31656 64 -     32627 T
e Lepilemur_dorsalis.k141_577674                             24745 64 +     45836 T
e Lepilemur_ankaranensis.k141_596936                          6798 64 -     23766 T
e Lemur_catta.scaffold_24                                 15519761 0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12244 69 -     42476 T
e Kogia_breviceps.KogBre_flattened_line_192630                1663 64 -      3359 T
e Jaculus_jaculus.JH725527.1                               8271367 64 -   9596543 T
e Inia_geoffrensis.IniGeo_flattened_line_48101               22396 64 +     23964 T
e Indri_indri.k141_3655594                                   18164 64 +     31101 T
e Ictidomys_tridecemlineatus.JH393364.1                    7514582 59 -   7955117 T
e Hystrix_cristata.HysCri_scaffold_5660                      80920 64 +    135385 T
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19846 64 -    143317 T
e Hyaena_hyaena.HyaHya_flattened_line_26932                  40612 57 +     55795 T
e Hipposideros_galeritus.HipGal_scaffold_29171               39814 63 +     43066 T
e Hipposideros_armiger.JXIK01000431.1                       108373 63 +   1711038 T
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112035 64 +    128679 T
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 240 64 +       961 T
e Heterocephalus_glaber.JH602082.1                        20659377 64 +  22651954 T
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17480 64 +     36099 T
e Helogale_parvula.HelPar_flattened_line_2585               238147 57 +    327341 T
e Hapalemur_occidentalis.k141_907772                          9234 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402 0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298 0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517 0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   30075 58 +     78134 T
e Glis_glis.GliGli_scaffold_19807                            30347 58 +     49224 T
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_56069               25462 64 +     26054 T
e Galagoides_demidoff.k141_31856                              3208 77 -      3432 T
e Fukomys_damarensis.KN121974.1                             848498 64 +   3816255 T
e Felis_nigripes.FelNig_flattened_line_20823                  5510 57 -     36744 T
e Felis_catus_fca126.CM031415.1                           20191985 57 + 205367284 T
e Eulemur_sanfordi.k141_1122526                               9432 0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267 0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247 0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321 0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369 0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369 0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184 0 -     25546 C
e Eulemur_collaris.k141_377015                                2154 0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453 0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             24792 64 -     44125 T
e Eschrichtius_robustus.EscRob_flattened_line_8968           10855 64 +    133382 T
e Erinaceus_europaeus.JH835339.1                           3325339 63 -   7059049 T
e Equus_przewalskii.KK951119.1                               29586 64 +    498745 T
e Equus_caballus.CM000403.2                               18527571 64 -  39960074 T
e Equus_asinus.JREZ01000139.1                              1279750 64 +   4378816 T
e Eptesicus_fuscus.JH977646.1                              2144065 64 -  14770903 T
e Enhydra_lutris.KZ291758.1                               16325770 65 -  41312741 T
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089003 64 +  10337057 T
e Elaphurus_davidianus.JRFZ01104969.1                       310280 64 +    607251 T
e Eidolon_helvum.KE759718.1                                   7414 63 +     11740 T
e Dolichotis_patagonum.DolPat_scaffold_30833                 31488 64 -     42551 T
e Dipodomys_stephensi.DipSte_scaffold_75855                  12014 64 +     14536 T
e Dipodomys_ordii.KN672350.1                              18895804 64 +  37912305 T
e Dinomys_branickii.DinBra_scaffold_21862                    34271 61 +     67921 T
e Diceros_bicornis.DicBicMic_scaffold_5955                    2483 64 +    198055 T
e Dicerorhinus_sumatrensis.PEKH010002091.1                  669408 64 +   1390856 T
e Desmodus_rotundus.KZ672289.1                             8627908 64 +  20541912 T
e Delphinapterus_leucas.KZ290073.1                        16811179 64 +  35494412 T
e Daubentonia_madagascariensis.ctg71                      12532892 64 -  12879189 T
e Dasypus_novemcinctus.JH564415.1                            61065 61 +   2246927 T
e Dasyprocta_punctata.DasPun_flattened_line_206793            1231 64 +      3576 T
e Cuniculus_paca.CunPac_flattened_line_231100                 2848 64 +      5455 T
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             24230 57 -     87169 T
e Crocidura_indochinensis.CroInd_scaffold_287352               365 35 +      4208 T
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          10493 61 -     20389 T
e Condylura_cristata.JH655891.1                           17545984 64 -  53390261 T
e Choloepus_hoffmanni.KN194906.1                            170253 63 +    839153 T
e Choloepus_didactylus.ChoDid_scaffold_45914                 15154 63 +     19366 T
e Chinchilla_lanigera.JH722012.1                           1248493 61 +   2543920 T
e Cheirogaleus_medius.k141_1055463                           12071 60 +     57038 T
e Cheirogaleus_major.k141_333249                             16722 60 -     52598 T
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            4795 47 -      6351 T
e Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2593 64 -      3715 T
e Cephalopachus_bancanus.k141_2037105                         4955 65 -      8605 T
e Cavia_tschudii.CavTsc_scaffold_8919                        98598 63 +    143979 T
e Cavia_porcellus.DS562891.1                              18359723 63 -  23407841 T
e Cavia_aperea.AVPZ01000300.1                             18347463 63 -  23392119 T
e Catagonus_wagneri.CatWag_scaffold_2839                     89250 105 +    217609 T
e Castor_canadensis.CasCan_scaffold_2074                    133642 61 +    179628 T
e Carollia_perspicillata.CarPer_scaffold_92756                2877 64 -     11696 T
e Carlito_syrichta.NW_007259797.1                           141039 65 -    496798 T
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18059996 64 -  44709034 T
e Capra_aegagrus.CM003241.1                               18829276 64 +  46296322 T
e Canis_lupus_orion.HG994398.1                            18496781 65 +  63665305 T
e Canis_lupus_familiaris.chr16                            17955480 65 -  59632846 T
e Canis_lupus_dingo.QKWQ01000480.1                         9031216 65 -   9314153 T
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    181829 65 -    185531 T
e CanFam4.chr16                                           17795772 65 -  60362399 T
e Camelus_ferus.KB017975.1                                  399642 64 -   1652518 T
e Camelus_dromedarius.KN272107.1                           2331366 64 -   7040546 T
e Camelus_bactrianus.KN276810.1                            9998902 64 -  17673402 T
e Bubalus_bubalis.KI419123.1                               2818451 64 +   4408762 T
e Bos_taurus.CM000203.6                                   18082962 64 +  45695690 T
e Bos_mutus.JH880303.1                                     1124884 64 -   1948126 T
e Bos_indicus.CM003047.1                                  20272324 64 +  48749331 T
e Bison_bison.KN261452.1                                    199119 64 -    288883 T
e Beatragus_hunteri.BeaHun_scaffold_50177                    26080 64 +     34529 T
e Balaenoptera_bonaerensis.DF707048.1                         2009 64 -     18090 T
e Balaenoptera_acutorostrata.KI537508.1                   15191543 64 +  23207421 T
e Avahi_peyrierasi.k141_1424874                              49929 61 +     85213 T
e Avahi_laniger.k141_765380                                  49304 61 -     92717 T
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  2459 64 +     43469 T
e Arctocebus_calabarensis.k141_288239                        14445 64 +     17124 T
e Aplodontia_rufa.AprRuf_scaffold_68852                       7262 59 +     20879 T
e Antilocapra_americana.AntAmePen_scaffold_12469             97610 64 -    100397 T
e Anoura_caudifer.AnoCau_scaffold_1412                      183107 64 +    412891 T
e Ammotragus_lervia.NIVO01071767.1                          675158 64 -   2318259 T
e Allactaga_bullata.AllBul_scaffold_9566                     64987 64 -     89534 T
e Ailurus_fulgens.LNAC01001112.1                             75208 65 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9506984 64 -  29979442 T
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           823285 57 -   1699592 T

a score=0.000000
s hg38.chrUn_KI270753v1                                       1053  4 +     62944 TG---------------------------CT
s Acinonyx_jubatus.LLWD01001279.1                           823228  3 -   1699592 AC----------------------------T
i Acinonyx_jubatus.LLWD01001279.1                        T 57 I 3
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506920  3 -  29979442 AC----------------------------T
i Ailuropoda_melanoleuca.LNAT01000098.1                  T 64 I 2
s Ailurus_fulgens.LNAC01001112.1                             75143  3 -    347723 AC----------------------------T
i Ailurus_fulgens.LNAC01001112.1                         T 65 I 3
s Allactaga_bullata.AllBul_scaffold_9566                     64923  3 -     89534 AG----------------------------A
i Allactaga_bullata.AllBul_scaffold_9566                 T 64 I 2
s Allenopithecus_nigroviridis.k141_3361533                    9249  4 -     52922 TG---------------------------CT
i Allenopithecus_nigroviridis.k141_3361533               T 70 I 2
s Allochrocebus_lhoesti.k141_4309873                          9176  4 -     28001 TG---------------------------CT
i Allochrocebus_lhoesti.k141_4309873                     T 70 I 2
s Allochrocebus_preussi.k141_310680                           9302  4 -      9772 TG---------------------------CT
i Allochrocebus_preussi.k141_310680                      T 70 I 2
s Allochrocebus_solatus.k141_166128                            459  4 -     12518 TG---------------------------CT
i Allochrocebus_solatus.k141_166128                      T 70 I 2
s Ammotragus_lervia.NIVO01071767.1                          675094  3 -   2318259 AG----------------------------T
i Ammotragus_lervia.NIVO01071767.1                       T 64 I 2
s Anoura_caudifer.AnoCau_scaffold_1412                      183043  3 +    412891 AC----------------------------T
i Anoura_caudifer.AnoCau_scaffold_1412                   T 64 I 2
s Antilocapra_americana.AntAmePen_scaffold_12469             97546  3 -    100397 AG----------------------------C
i Antilocapra_americana.AntAmePen_scaffold_12469         T 64 I 2
s Aplodontia_rufa.AprRuf_scaffold_68852                       7203  3 +     20879 GG----------------------------A
i Aplodontia_rufa.AprRuf_scaffold_68852                  T 59 I 2
s Arctocebus_calabarensis.k141_288239                        14381  3 +     17124 AA----------------------------T
i Arctocebus_calabarensis.k141_288239                    T 64 I 2
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2395  3 +     43469 AG----------------------------T
i Artibeus_jamaicensis.ArtJam_scaffold_25439             T 64 I 2
s Avahi_laniger.k141_765380                                  49243  3 -     92717 GG----------------------------T
i Avahi_laniger.k141_765380                              T 61 I 2
s Avahi_peyrierasi.k141_1424874                              49868  3 +     85213 GG----------------------------T
i Avahi_peyrierasi.k141_1424874                          T 61 I 2
s Balaenoptera_acutorostrata.KI537508.1                   15191479  3 +  23207421 AG----------------------------T
i Balaenoptera_acutorostrata.KI537508.1                  T 64 I 2
s Balaenoptera_bonaerensis.DF707048.1                         1945  3 -     18090 AG----------------------------T
i Balaenoptera_bonaerensis.DF707048.1                    T 64 I 2
s Beatragus_hunteri.BeaHun_scaffold_50177                    26016  3 +     34529 GG----------------------------T
i Beatragus_hunteri.BeaHun_scaffold_50177                T 64 I 2
s Bison_bison.KN261452.1                                    199055  3 -    288883 AG----------------------------T
i Bison_bison.KN261452.1                                 T 64 I 2
s Bos_indicus.CM003047.1                                  20272260  3 +  48749331 AG----------------------------N
i Bos_indicus.CM003047.1                                 T 64 I 2
s Bos_mutus.JH880303.1                                     1124820  3 -   1948126 AG----------------------------T
i Bos_mutus.JH880303.1                                   T 64 I 2
s Bos_taurus.CM000203.6                                   18082898  3 +  45695690 AG----------------------------T
i Bos_taurus.CM000203.6                                  T 64 I 2
s Bubalus_bubalis.KI419123.1                               2818387  3 +   4408762 AG----------------------------T
i Bubalus_bubalis.KI419123.1                             T 64 I 2
s Camelus_bactrianus.KN276810.1                            9998838  3 -  17673402 AG----------------------------T
i Camelus_bactrianus.KN276810.1                          T 64 I 2
s Camelus_dromedarius.KN272107.1                           2331302  3 -   7040546 AG----------------------------T
i Camelus_dromedarius.KN272107.1                         T 64 I 2
s Camelus_ferus.KB017975.1                                  399578  3 -   1652518 AG----------------------------T
i Camelus_ferus.KB017975.1                               T 64 I 2
s CanFam4.chr16                                           17795707  3 -  60362399 GC----------------------------T
i CanFam4.chr16                                          T 65 I 3
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181764  3 -    185531 GC----------------------------T
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 T 65 I 3
s Canis_lupus_dingo.QKWQ01000480.1                         9031151  3 -   9314153 GC----------------------------T
i Canis_lupus_dingo.QKWQ01000480.1                       T 65 I 3
s Canis_lupus_familiaris.chr16                            17955415  3 -  59632846 GC----------------------------T
i Canis_lupus_familiaris.chr16                           T 65 I 3
s Canis_lupus_orion.HG994398.1                            18496716  3 +  63665305 GC----------------------------T
i Canis_lupus_orion.HG994398.1                           T 65 I 3
s Capra_aegagrus.CM003241.1                               18829212  3 +  46296322 AG----------------------------T
i Capra_aegagrus.CM003241.1                              T 64 I 2
s Capra_hircus.CM004588.1                                 18059932  3 -  44709034 AG----------------------------T
i Capra_hircus.CM004588.1                                T 64 I 2
s Carlito_syrichta.NW_007259797.1                           140974  4 -    496798 GG--G-------------------------T
i Carlito_syrichta.NW_007259797.1                        T 65 I 2
s Carollia_perspicillata.CarPer_scaffold_92756                2813  3 -     11696 AG----------------------------T
i Carollia_perspicillata.CarPer_scaffold_92756           T 64 I 2
s Castor_canadensis.CasCan_scaffold_2074                    133581  3 +    179628 GG----------------------------C
i Castor_canadensis.CasCan_scaffold_2074                 T 61 I 2
s Catagonus_wagneri.CatWag_scaffold_2839                     89145  3 +    217609 AG----------------------------T
i Catagonus_wagneri.CatWag_scaffold_2839                 T 105 I 2
s Cavia_aperea.AVPZ01000300.1                             18347400  3 -  23392119 GG----------------------------T
i Cavia_aperea.AVPZ01000300.1                            T 63 I 2
s Cavia_porcellus.DS562891.1                              18359660  3 -  23407841 GG----------------------------T
i Cavia_porcellus.DS562891.1                             T 63 I 2
s Cavia_tschudii.CavTsc_scaffold_8919                        98535  3 +    143979 GG----------------------------T
i Cavia_tschudii.CavTsc_scaffold_8919                    T 63 I 2
s Cephalopachus_bancanus.k141_2037105                         4890  4 -      8605 GG--G-------------------------T
i Cephalopachus_bancanus.k141_2037105                    T 65 I 2
s Ceratotherium_simum.JH767749.1                          12227811  3 +  27778364 AG----------------------------T
i Ceratotherium_simum.JH767749.1                         T 64 I 2
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2529  3 -      3715 AG----------------------------T
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     T 64 I 2
s Cercocebus_atys.KQ010504.1                               4470220  4 +   4669795 TG---------------------------CT
i Cercocebus_atys.KQ010504.1                             T 70 I 2
s Cercocebus_chrysogaster.k141_393940                         8769  4 -     19203 TG---------------------------CT
i Cercocebus_chrysogaster.k141_393940                    T 70 I 2
s Cercocebus_lunulatus.k141_3846941                           3188  4 +      8260 TG---------------------------CT
i Cercocebus_lunulatus.k141_3846941                      T 70 I 2
s Cercocebus_torquatus.k141_3057011                           3418  4 +     27781 TG---------------------------CT
i Cercocebus_torquatus.k141_3057011                      T 70 I 2
s Cercopithecus_ascanius.k141_1024104                         3564  4 -     20310 TG---------------------------CT
i Cercopithecus_ascanius.k141_1024104                    T 70 I 2
s Cercopithecus_cephus.k141_1078548                           6548  4 +     29689 TG---------------------------CT
i Cercopithecus_cephus.k141_1078548                      T 70 I 2
s Cercopithecus_diana.k141_2427854                             901  4 +      9989 CG---------------------------CT
i Cercopithecus_diana.k141_2427854                       T 70 I 2
s Cercopithecus_hamlyni.k141_187466                           9236  4 -     27936 TG---------------------------CT
i Cercopithecus_hamlyni.k141_187466                      T 70 I 2
s Cercopithecus_lowei.k141_457449                             9255  4 -     11289 TG---------------------------CT
i Cercopithecus_lowei.k141_457449                        T 70 I 2
s Cercopithecus_albogularis.ctg5                                38811631  4 +  39242232 TG---------------------------CT
i Cercopithecus_albogularis.ctg5                               T 70 I 2
s Cercopithecus_mona.ctg39                                21217322  4 -  21565898 TG---------------------------CT
i Cercopithecus_mona.ctg39                               T 70 I 2
s Cercopithecus_neglectus.k141_2526306                       34442  4 -     53127 TG---------------------------CT
i Cercopithecus_neglectus.k141_2526306                   T 70 I 2
s Cercopithecus_nictitans.k141_3278028                        1734  4 +      7159 TG---------------------------CT
i Cercopithecus_nictitans.k141_3278028                   T 70 I 2
s Cercopithecus_petaurista.k141_807961                        9247  4 -     27947 TG---------------------------CT
i Cercopithecus_petaurista.k141_807961                   T 70 I 2
s Cercopithecus_pogonias.k141_822820                          9223  4 +     17596 TG---------------------------CT
i Cercopithecus_pogonias.k141_822820                     T 70 I 2
s Cercopithecus_roloway.k141_3180641                         39717  4 -     41420 TG---------------------------CT
i Cercopithecus_roloway.k141_3180641                     T 70 I 2
s Cheirogaleus_major.k141_333249                             16662  3 -     52598 GG----------------------------T
i Cheirogaleus_major.k141_333249                         T 60 I 2
s Cheirogaleus_medius.k141_1055463                           12011  3 +     57038 GG----------------------------T
i Cheirogaleus_medius.k141_1055463                       T 60 I 2
s Chinchilla_lanigera.JH722012.1                           1248432  3 +   2543920 GG----------------------------T
i Chinchilla_lanigera.JH722012.1                         T 61 I 2
s Chlorocebus_aethiops.ctg25                              18423186  4 -  18827391 TG---------------------------CT
i Chlorocebus_aethiops.ctg25                             T 70 I 2
s Chlorocebus_pygerythrus.k141_1025673                        9629  4 -     50209 TG---------------------------CT
i Chlorocebus_pygerythrus.k141_1025673                   T 70 I 2
s Chlorocebus_sabaeus.CM001947.1                         135416634  4 + 135778131 TG---------------------------CT
i Chlorocebus_sabaeus.CM001947.1                         T 70 I 2
s Choloepus_didactylus.ChoDid_scaffold_45914                 15091  3 +     19366 GA----------------------------T
i Choloepus_didactylus.ChoDid_scaffold_45914             T 63 I 2
s Choloepus_hoffmanni.KN194906.1                            170190  3 +    839153 GA----------------------------T
i Choloepus_hoffmanni.KN194906.1                         T 63 I 2
s Colobus_angolensis.KN981557.1                            1905163  4 +   2368649 TG---------------------------CT
i Colobus_angolensis.KN981557.1                          T 70 I 2
s Colobus_guereza.LG01                                   199944781 31 + 200372422 TGCTGTGTTAGAGGAACTGTACACACCTGCT
i Colobus_guereza.LG01                                   T 122 I 2
s Colobus_polykomos.k141_906115                              31675 31 +     84244 TGCTGTGTTAGAGGAACTGTACACACCTGCT
i Colobus_polykomos.k141_906115                          T 97 I 2
s Condylura_cristata.JH655891.1                           17545920  3 -  53390261 AG----------------------------T
i Condylura_cristata.JH655891.1                          T 64 I 2
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10432  3 -     20389 AA----------------------------T
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      T 61 I 2
s Crocidura_indochinensis.CroInd_scaffold_603213              1025  3 +      1923 TG----------------------------T
i Crocidura_indochinensis.CroInd_scaffold_603213         T 2 T 3
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24173  3 -     87169 AC----------------------------T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         T 57 I 3
s Cuniculus_paca.CunPac_flattened_line_231100                 2784  3 +      5455 GC----------------------------T
i Cuniculus_paca.CunPac_flattened_line_231100            T 64 I 2
s Dasyprocta_punctata.DasPun_flattened_line_206793            1167  3 +      3576 GG----------------------------T
i Dasyprocta_punctata.DasPun_flattened_line_206793       T 64 I 2
s Dasypus_novemcinctus.JH564415.1                            61004  3 +   2246927 GA----------------------------T
i Dasypus_novemcinctus.JH564415.1                        T 61 I 2
s Daubentonia_madagascariensis.ctg71                      12532828  3 -  12879189 GG----------------------------T
i Daubentonia_madagascariensis.ctg71                     T 64 I 2
s Delphinapterus_leucas.KZ290073.1                        16811115  3 +  35494412 AG----------------------------T
i Delphinapterus_leucas.KZ290073.1                       T 64 I 2
s Desmodus_rotundus.KZ672289.1                             8627844  3 +  20541912 AG----------------------------T
i Desmodus_rotundus.KZ672289.1                           T 64 I 2
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669344  3 +   1390856 AG----------------------------T
i Dicerorhinus_sumatrensis.PEKH010002091.1               T 64 I 2
s Diceros_bicornis.DicBicMic_scaffold_5955                    2419  3 +    198055 AG----------------------------T
i Diceros_bicornis.DicBicMic_scaffold_5955               T 64 I 2
s Dinomys_branickii.DinBra_scaffold_21862                    34210  3 +     67921 GG----------------------------T
i Dinomys_branickii.DinBra_scaffold_21862                T 61 I 2
s Dipodomys_ordii.KN672350.1                              18895740  3 +  37912305 GG----------------------------A
i Dipodomys_ordii.KN672350.1                             T 64 I 2
s Dipodomys_stephensi.DipSte_scaffold_75855                  11950  3 +     14536 GG----------------------------A
i Dipodomys_stephensi.DipSte_scaffold_75855              T 64 I 2
s Dolichotis_patagonum.DolPat_scaffold_30833                 31424  3 -     42551 GG----------------------------T
i Dolichotis_patagonum.DolPat_scaffold_30833             T 64 I 2
s Eidolon_helvum.KE759718.1                                   7351  3 +     11740 AG----------------------------T
i Eidolon_helvum.KE759718.1                              T 63 I 3
s Elaphurus_davidianus.JRFZ01104969.1                       310216  3 +    607251 AG----------------------------T
i Elaphurus_davidianus.JRFZ01104969.1                    T 64 I 2
s Elephantulus_edwardii.JH947257.1                         1088939  3 +  10337057 GA----------------------------G
i Elephantulus_edwardii.JH947257.1                       T 64 I 2
s Enhydra_lutris.KZ291758.1                               16325705  3 -  41312741 AC----------------------------T
i Enhydra_lutris.KZ291758.1                              T 65 I 3
s Eptesicus_fuscus.JH977646.1                              2144001  3 -  14770903 AG----------------------------T
i Eptesicus_fuscus.JH977646.1                            T 64 I 2
s Equus_asinus.JREZ01000139.1                              1279686  3 +   4378816 AG----------------------------T
i Equus_asinus.JREZ01000139.1                            T 64 I 2
s Equus_caballus.CM000403.2                               18527507  3 -  39960074 AG----------------------------T
i Equus_caballus.CM000403.2                              T 64 I 2
s Equus_przewalskii.KK951119.1                               29522  3 +    498745 AG----------------------------T
i Equus_przewalskii.KK951119.1                           T 64 I 2
s Erinaceus_europaeus.JH835339.1                           3325276  3 -   7059049 AG----------------------------T
i Erinaceus_europaeus.JH835339.1                         T 63 I 2
s Erythrocebus_patas.Contig38                             21199865  4 -  21539334 TG---------------------------CT
i Erythrocebus_patas.Contig38                            T 70 I 2
s Eschrichtius_robustus.EscRob_flattened_line_8968           10791  3 +    133382 AG----------------------------T
i Eschrichtius_robustus.EscRob_flattened_line_8968       T 64 I 2
s Eubalaena_japonica.EubJap_flattened_line_31514             24728  3 -     44125 AG----------------------------T
i Eubalaena_japonica.EubJap_flattened_line_31514         T 64 I 2
s Felis_catus.AANG03299807.1                                   350  3 -       507 AC----------------------------T
i Felis_catus.AANG03299807.1                             T 57 I 3
s Felis_catus_fca126.CM031415.1                           20191928  3 + 205367284 AC----------------------------T
i Felis_catus_fca126.CM031415.1                          T 57 I 3
s Felis_nigripes.FelNig_flattened_line_20823                  5453  3 -     36744 AC----------------------------T
i Felis_nigripes.FelNig_flattened_line_20823             T 57 I 3
s Fukomys_damarensis.KN121974.1                             848434  3 +   3816255 GA----------------------------T
i Fukomys_damarensis.KN121974.1                          T 64 I 2
s Galagoides_demidoff.k141_31856                              3131  3 -      3432 aa----------------------------g
i Galagoides_demidoff.k141_31856                         T 77 I 2
s Galeopterus_variegatus.GalVar_scaffold_56069               25398  3 +     26054 GG----------------------------T
i Galeopterus_variegatus.GalVar_scaffold_56069           T 64 I 2
s Glis_glis.GliGli_scaffold_19807                            30289  3 +     49224 GC----------------------------T
i Glis_glis.GliGli_scaffold_19807                        T 58 I 2
s Gorilla_beringei.k141_3596273                              10494  4 -     32273 TG---------------------------CT
i Gorilla_beringei.k141_3596273                          I 70 T 140
s Gorilla_gorilla.LT578341.1                             186332644  4 + 186649187 TG---------------------------CT
i Gorilla_gorilla.LT578341.1                             I 70 T 140
s Graphiurus_murinus.GraMur_scaffold_10447                   30017  3 +     78134 AC----------------------------T
i Graphiurus_murinus.GraMur_scaffold_10447               T 58 I 2
s Helogale_parvula.HelPar_flattened_line_2585               238090  3 +    327341 AC----------------------------T
i Helogale_parvula.HelPar_flattened_line_2585            T 57 I 3
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17416  3 +     36099 AG----------------------------T
i Hemitragus_hylocrius.HemHyl_scaffold_45859             T 64 I 2
s Heterocephalus_glaber.JH602082.1                        20659313  3 +  22651954 GA----------------------------C
i Heterocephalus_glaber.JH602082.1                       T 64 I 2
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 176  3 +       961 GG----------------------------T
i Heterohyrax_brucei.HetBruBak_scaffold_383740           T 64 I 2
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111971  3 +    128679 AG----------------------------T
i Hippopotamus_amphibius.HipAmp_scaffold_9076            T 64 I 2
s Hipposideros_armiger.JXIK01000431.1                       108310  3 +   1711038 AG----------------------------T
i Hipposideros_armiger.JXIK01000431.1                    T 63 I 2
s Hipposideros_galeritus.HipGal_scaffold_29171               39751  3 +     43066 AG----------------------------T
i Hipposideros_galeritus.HipGal_scaffold_29171           T 63 I 2
s Hoolock_leuconedys.ctg274                                    429399  4 +    630532 TG---------------------------CT
i Hoolock_leuconedys.ctg274                                 I 136 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40555  3 +     55795 AC----------------------------T
i Hyaena_hyaena.HyaHya_flattened_line_26932              T 57 I 3
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19782  3 -    143317 GG----------------------------T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        T 64 I 2
s Hylobates_agilis.k141_307679                               12317  4 -     15490 TG---------------------------CT
i Hylobates_agilis.k141_307679                           I 136 I 2
s Hylobates_klossii.k141_282416                              54322  4 +     67168 TG---------------------------CT
i Hylobates_klossii.k141_282416                          I 136 I 2
s Hylobates_pileatus_b.LG02                                     189537974  4 - 191637585 TG---------------------------CT
i Hylobates_pileatus_b.LG02                                     I 136 T 203
s Hylobates_pileatus_a.tarseq_633                            3330867  4 -  11177569 TG---------------------------CT
i Hylobates_pileatus_a.tarseq_633                          I 136 I 2
s Hystrix_cristata.HysCri_scaffold_5660                      80856  3 +    135385 GG----------------------------T
i Hystrix_cristata.HysCri_scaffold_5660                  T 64 I 2
s Ictidomys_tridecemlineatus.JH393364.1                    7514523  3 -   7955117 GG----------------------------T
i Ictidomys_tridecemlineatus.JH393364.1                  T 59 I 2
s Indri_indri.k141_3655594                                   18100  3 +     31101 GG----------------------------T
i Indri_indri.k141_3655594                               T 64 I 2
s Inia_geoffrensis.IniGeo_flattened_line_48101               22332  3 +     23964 AG----------------------------G
i Inia_geoffrensis.IniGeo_flattened_line_48101           T 64 I 2
s Jaculus_jaculus.JH725527.1                               8271303  3 -   9596543 AG----------------------------T
i Jaculus_jaculus.JH725527.1                             T 64 I 2
s Kogia_breviceps.KogBre_flattened_line_192630                1599  3 -      3359 AG----------------------------T
i Kogia_breviceps.KogBre_flattened_line_192630           T 64 I 2
s Lasiurus_borealis.LasBor_scaffold_32767                    12175  3 -     42476 AG----------------------------T
i Lasiurus_borealis.LasBor_scaffold_32767                T 69 I 7
s Lepilemur_ankaranensis.k141_596936                          6734  3 -     23766 GG----------------------------T
i Lepilemur_ankaranensis.k141_596936                     T 64 I 2
s Lepilemur_dorsalis.k141_577674                             24681  3 +     45836 GG----------------------------T
i Lepilemur_dorsalis.k141_577674                         T 64 I 2
s Lepilemur_ruficaudatus.k141_420445                         31592  3 -     32627 GG----------------------------T
i Lepilemur_ruficaudatus.k141_420445                     T 64 I 2
s Lepilemur_septentrionalis.k141_185316                      22736  3 +     54090 GG----------------------------T
i Lepilemur_septentrionalis.k141_185316                  T 64 I 2
s Leptonychotes_weddellii.KB714746.1                       3036038  3 +   3914936 AC----------------------------T
i Leptonychotes_weddellii.KB714746.1                     T 65 I 3
s Lipotes_vexillifer.KE559953.1                             267413  3 -    662738 AG----------------------------T
i Lipotes_vexillifer.KE559953.1                          T 61 I 2
s Lophocebus_aterrimus.ctg367                              1431390  4 +   1826925 TG---------------------------CT
i Lophocebus_aterrimus.ctg367                            T 71 I 2
s Loris_lydekkerianus.k141_2539221                             633  3 +     11245 AA----------------------------T
i Loris_lydekkerianus.k141_2539221                       T 59 I 2
s Loris_tardigradus.ctg83                                   999468  3 +   6120653 AA----------------------------T
i Loris_tardigradus.ctg83                                T 60 I 2
s Loxodonta_africana.GL010049.1                            4214449  3 -  43346337 GG----------------------------T
i Loxodonta_africana.GL010049.1                          T 64 I 2
s Lycaon_pictus.CM007581.1                                17951655  3 -  59628241 GC----------------------------T
i Lycaon_pictus.CM007581.1                               T 65 I 3
s Macaca_arctoides.k141_2326796                               1575  4 +     40492 TG---------------------------CC
i Macaca_arctoides.k141_2326796                          T 70 I 2
s Macaca_assamensis.Contig5                               59670835  4 +  60120075 TG---------------------------CT
i Macaca_assamensis.Contig5                              T 70 I 2
s Macaca_cyclopis.k119_18836                                  7333  4 -     26193 TG---------------------------CT
i Macaca_cyclopis.k119_18836                             T 70 I 2
s Macaca_fascicularis.k141_814140                            75127  4 -    114318 TG---------------------------CT
i Macaca_fascicularis.k141_814140                        T 70 I 2
s Macaca_fuscata.k119_255327                                   846  4 -     23192 TG---------------------------CT
i Macaca_fuscata.k119_255327                             T 70 I 2
s Macaca_leonina.k141_3550399                                10299  4 -     29190 TG---------------------------CT
i Macaca_leonina.k141_3550399                            T 70 I 2
s Macaca_maura.k141_2733130                                  18866  4 +     37952 TG---------------------------CT
i Macaca_maura.k141_2733130                              T 70 I 2
s Macaca_mulatta.NC_041758.1                             186833954  4 + 187317192 TG---------------------------CT
i Macaca_mulatta.NC_041758.1                             T 70 I 2
s Macaca_nemestrina.KQ007038.1                            25452515  4 -  25927173 TG---------------------------CT
i Macaca_nemestrina.KQ007038.1                           T 70 I 2
s Macaca_nigra.k141_1655396                                  74715  4 +     89720 TG---------------------------CT
i Macaca_nigra.k141_1655396                              T 70 I 2
s Macaca_radiata.k141_3680011                                 1712  4 +     20474 TG---------------------------CT
i Macaca_radiata.k141_3680011                            T 70 I 2
s Macaca_siberu.k141_635500                                   1513  4 -     14993 TG---------------------------CT
i Macaca_siberu.k141_635500                              T 70 I 2
s Macaca_silenus.Contig273                                  324386  4 -    668171 TG---------------------------CT
i Macaca_silenus.Contig273                               T 70 I 2
s Macaca_thibetana.k99_7456                                  15655  4 -     15935 TG---------------------------CT
i Macaca_thibetana.k99_7456                              T 70 I 2
s Macaca_tonkeana.k141_1498238                               20452  4 -     45290 TG---------------------------CT
i Macaca_tonkeana.k141_1498238                           T 70 I 2
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87498  3 +     94391 AG----------------------------T
i Macroglossus_sobrinus.MacSob_scaffold_8222             T 62 I 2
s Mandrillus_leucophaeus.scaffold280                      23932007  4 -  24302211 TG---------------------------CT
i Mandrillus_leucophaeus.scaffold280                     T 70 I 2
s Mandrillus_sphinx.Contig270                               346185  4 +    752769 TG---------------------------CT
i Mandrillus_sphinx.Contig270                            T 70 I 2
s Manis_javanica.JSZB01003497.1                              15543  3 +    737560 AG----------------------------T
i Manis_javanica.JSZB01003497.1                          T 62 I 2
s Manis_pentadactyla.KN006162.1                              46932  3 -    317179 AG----------------------------T
i Manis_pentadactyla.KN006162.1                          T 62 I 2
s Marmota_marmota.CZRN01000018.1                          33097373  3 -  40650429 GG----------------------------T
i Marmota_marmota.CZRN01000018.1                         T 59 I 2
s Megaderma_lyra.MegLyr_scaffold_4542                         6730  2 -    207569 A-----------------------------T
i Megaderma_lyra.MegLyr_scaffold_4542                    T 45 I 2
s Mellivora_capensis.MelCap_flattened_line_69365              6169  3 +     13704 AC----------------------------T
i Mellivora_capensis.MelCap_flattened_line_69365         T 65 I 3
s Mesoplodon_bidens.MesBid_scaffold_108144                    3000  3 +     10310 AG----------------------------T
i Mesoplodon_bidens.MesBid_scaffold_108144               T 64 I 2
s Microcebus_murinus.CM007674.1                           18283260  3 -  93316391 GG----------------------------T
i Microcebus_murinus.CM007674.1                          T 64 I 2
s Micronycteris_hirsuta.MicHir_scaffold_52381                13355  3 -     19307 AG----------------------------T
i Micronycteris_hirsuta.MicHir_scaffold_52381            T 64 I 2
s Miniopterus_natalensis.LDJU01000034.1                    1849029  3 +   8254450 AG----------------------------C
i Miniopterus_natalensis.LDJU01000034.1                  T 64 I 2
s Miniopterus_schreibersii.MinSch_scaffold_18080             32905  3 +     64694 AG----------------------------C
i Miniopterus_schreibersii.MinSch_scaffold_18080         T 64 I 2
s Miopithecus_ogouensis.k141_534055                           3742  4 -     28506 TG---------------------------CT
i Miopithecus_ogouensis.k141_534055                      T 70 I 2
s Mirounga_angustirostris.MirAng_flattened_line_22144        62368  3 -     63350 AC----------------------------T
i Mirounga_angustirostris.MirAng_flattened_line_22144    T 65 I 3
s Mirza_zaza.k141_952172                                      4615  3 -     37649 GG----------------------------T
i Mirza_zaza.k141_952172                                 T 63 I 2
s Monodon_monoceros.MonMon_M_scaffold_103                    26505  3 -    437263 AG----------------------------T
i Monodon_monoceros.MonMon_M_scaffold_103                T 64 I 2
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137761  3 -    366855 AG----------------------------G
i Mormoops_blainvillei.MorMeg_scaffold_1417              T 64 I 2
s Moschus_moschiferus.MosMos_scaffold_61429                  27356  3 -     27816 AG----------------------------A
i Moschus_moschiferus.MosMos_scaffold_61429              T 64 I 2
s Mungos_mungo.MunMun_flattened_line_23663                   31291  3 +     37127 AC----------------------------T
i Mungos_mungo.MunMun_flattened_line_23663               T 57 I 3
s Muscardinus_avellanarius.MusAve_scaffold_82313              2282  3 +     14296 GT----------------------------T
i Muscardinus_avellanarius.MusAve_scaffold_82313         T 58 I 2
s Mustela_putorius.JH418006.1                               297600  3 -  14710649 AC----------------------------T
i Mustela_putorius.JH418006.1                            T 65 I 3
s Myotis_brandtii.KE162005.1                                278236  3 -  10118263 AG----------------------------T
i Myotis_brandtii.KE162005.1                             T 53 I 2
s Myotis_davidii.KB100139.1                                1585793  3 -   6019432 AG----------------------------T
i Myotis_davidii.KB100139.1                              T 53 I 2
s Myotis_lucifugus.GL429869.1                              3902002  3 -   4330536 AG----------------------------T
i Myotis_lucifugus.GL429869.1                            T 53 I 2
s Myotis_myotis.MyoMyo_scaffold_28916                        32561  3 +     33610 AG----------------------------T
i Myotis_myotis.MyoMyo_scaffold_28916                    T 53 I 2
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186042  3 +    196477 GA----------------------------T
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           T 63 I 2
s Nasalis_larvatus.k141_413338                                9755  4 +     21681 TG---------------------------TT
i Nasalis_larvatus.k141_413338                           T 70 I 2
s Neophocaena_asiaeorientalis.KZ687982.1                   5865461  3 +   7148211 AG----------------------------T
i Neophocaena_asiaeorientalis.KZ687982.1                 T 64 I 2
s Noctilio_leporinus.NocLep_scaffold_251                    756326  2 +    783361 -G----------------------------T
i Noctilio_leporinus.NocLep_scaffold_251                 T 63 I 2
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145916  3 -   9404916 GC----------------------------T
i Nyctereutes_procyonoides.CAJHUB010000658.1             T 65 I 3
s Nycticebus_bengalensis.LG01                            102574437  3 - 196305487 AA----------------------------T
i Nycticebus_bengalensis.LG01                            T 59 I 2
s Nycticebus_coucang.k141_5327727                             2123  3 +      8486 AA----------------------------T
i Nycticebus_coucang.k141_5327727                        T 59 I 2
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744864  3 + 199412804 AA----------------------------T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       T 59 I 2
s Ochotona_princeps.JH802162.1                             1355697  3 +   3988456 GG----------------------------T
i Ochotona_princeps.JH802162.1                           T 52 I 2
s Odobenus_rosmarus.KB229312.1                              500657  3 -   2017862 AC----------------------------T
i Odobenus_rosmarus.KB229312.1                           T 65 I 3
s Odocoileus_virginianus.KZ100018.1                         144589  3 +    630418 AT----------------------------T
i Odocoileus_virginianus.KZ100018.1                      T 63 I 2
s Orcinus_orca.KB316932.1                                  2781376  3 -  10937097 AG----------------------------T
i Orcinus_orca.KB316932.1                                T 64 I 2
s Orycteropus_afer.OryAfe_flattened_line_144387               6774  3 -     18566 GA----------------------------T
i Orycteropus_afer.OryAfe_flattened_line_144387          T 64 I 2
s Otocyon_megalotis.JAEUCK010005147.1                       458670  3 -    559221 GC----------------------------T
i Otocyon_megalotis.JAEUCK010005147.1                    T 65 I 3
s Ovis_aries.CM001607.2                                   17584947  3 +  44047080 AG----------------------------T
i Ovis_aries.CM001607.2                                  T 64 I 2
s Ovis_canadensis.OviCan_scaffold_2572                      173368  3 -    191736 AG----------------------------T
i Ovis_canadensis.OviCan_scaffold_2572                   T 64 I 2
s Pan_paniscus.KQ411613.1                                    38476  4 +     80009 tg---------------------------ct
i Pan_paniscus.KQ411613.1                                T 67 I 67
s Pan_troglodytes.CM009242.2                             189137507  4 + 189151597 tg---------------------------ct
i Pan_troglodytes.CM009242.2                             I 139 T 209
s Panthera_onca.PanOnc_flattened_line_3271                  147075  3 +    230217 AC----------------------------T
i Panthera_onca.PanOnc_flattened_line_3271               T 57 I 3
s Panthera_pardus.KV860321.1                                259784  3 +  18783137 AC----------------------------T
i Panthera_pardus.KV860321.1                             T 57 I 3
s Panthera_tigris.KE722367.1                               4716931  3 -   8748460 AC----------------------------T
i Panthera_tigris.KE722367.1                             T 57 I 3
s Pantholops_hodgsonii.KE114653.1                          1264301  3 -   2937107 AG----------------------------T
i Pantholops_hodgsonii.KE114653.1                        T 64 I 2
s Papio_anubis.CM001495.2                                183437329  4 + 183742232 TG---------------------------CT
i Papio_anubis.CM001495.2                                T 70 I 2
s Papio_cynocephalus.k141_4307930                             1394  4 +     20448 TG---------------------------CT
i Papio_cynocephalus.k141_4307930                        T 163 I 2
s Papio_hamadryas.Contig39                                20558013  4 +  20919399 TG---------------------------CT
i Papio_hamadryas.Contig39                               T 70 I 2
s Papio_kindae.k141_1936966                                    137  4 +     41871 TG---------------------------CT
i Papio_kindae.k141_1936966                              T 163 I 2
s Papio_ursinus.k141_3428135                                  3415  4 +      9205 TG---------------------------CT
i Papio_ursinus.k141_3428135                             T 70 I 2
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8810  3 -     78924 AC----------------------------T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 T 57 I 3
s Perodicticus_ibeanus.k141_855320                            4614  3 +     13100 AA----------------------------T
i Perodicticus_ibeanus.k141_855320                       T 64 I 2
s Perodicticus_potto.k141_1092580                             2982  3 +     25941 AA----------------------------T
i Perodicticus_potto.k141_1092580                        T 64 I 2
s Perognathus_longimembris.PerPac_flattened_line_34437       25297  3 +     32600 GG----------------------------A
i Perognathus_longimembris.PerPac_flattened_line_34437   T 19 I 2
s Petromus_typicus.PetTyp_scaffold_42190                     25782  3 -     29689 GA----------------------------T
i Petromus_typicus.PetTyp_scaffold_42190                 T 63 I 2
s Phocoena_phocoena.PhoPho_flattened_line_24159               8423  3 +     63832 AG----------------------------T
i Phocoena_phocoena.PhoPho_flattened_line_24159          T 64 I 2
s Piliocolobus_badius.k141_1234363                           38271  4 +     62158 TG---------------------------CT
i Piliocolobus_badius.k141_1234363                       T 70 I 2
s Piliocolobus_gordonorum.k141_381342                        32998  4 +     89929 TG---------------------------CT
i Piliocolobus_gordonorum.k141_381342                    T 70 I 2
s Piliocolobus_kirkii.k141_448987                            34414  4 +     51399 TG---------------------------CT
i Piliocolobus_kirkii.k141_448987                        T 70 I 2
s Piliocolobus_tephrosceles.PDMG02000141.1                14290635  4 -  14605196 TG---------------------------CT
i Piliocolobus_tephrosceles.PDMG02000141.1               T 70 I 2
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              375  3 +     22620 AG----------------------------T
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        T 64 I 2
s Platanista_gangetica.PlaMin_flattened_line_32310           34129  3 +     35617 AG----------------------------T
i Platanista_gangetica.PlaMin_flattened_line_32310       T 64 I 2
s Pongo_abelii.CM009266.2                                189125689  4 + 189387572 TG---------------------------CT
i Pongo_abelii.CM009266.2                                I 136 T 511
s Pongo_pygmaeus.ctg66                                     9565293  4 +   9816681 TG---------------------------CT
i Pongo_pygmaeus.ctg66                                   I 137 T 272
s Presbytis_comata.k141_677006                               67915  4 -     81375 TG---------------------------TT
i Presbytis_comata.k141_677006                           T 70 I 2
s Presbytis_mitrata.k141_2342859                              9742  4 +     10147 TG---------------------------TT
i Presbytis_mitrata.k141_2342859                         T 70 I 2
s Procavia_capensis.ProCapCap_scaffold_85530                  9937  3 -     22811 GG----------------------------T
i Procavia_capensis.ProCapCap_scaffold_85530             T 64 I 2
s Propithecus_coquerelli.NW_012148875.1                     986314  3 +   2598838 GG----------------------------T
i Propithecus_coquerelli.NW_012148875.1                  T 61 I 2
s Propithecus_coronatus.k141_347390                          24603  3 +     38485 GG----------------------------T
i Propithecus_coronatus.k141_347390                      T 61 I 2
s Propithecus_diadema.k141_357118                              764  3 +      4256 GG----------------------------T
i Propithecus_diadema.k141_357118                        T 61 I 2
s Propithecus_edwardsi.k141_1176054                          22122  3 +     35766 GG----------------------------T
i Propithecus_edwardsi.k141_1176054                      T 61 I 2
s Propithecus_perrieri.k141_1200571                            305  3 -     24134 GG----------------------------T
i Propithecus_perrieri.k141_1200571                      T 61 I 2
s Propithecus_tattersalli.k141_790011                        24117  3 -     67325 GG----------------------------T
i Propithecus_tattersalli.k141_790011                    T 61 I 2
s Propithecus_verreauxi.k141_956661                            362  3 -      6182 GG----------------------------T
i Propithecus_verreauxi.k141_956661                      T 61 I 2
s Pteronotus_parnellii.KE909381.1                            11143  3 -     21811 AG----------------------------T
i Pteronotus_parnellii.KE909381.1                        T 64 I 2
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36611  3 +     42204 AC----------------------------T
i Pteronura_brasiliensis.PteBra_flattened_line_31117     T 65 I 3
s Pteropus_alecto.KB030862.1                              22973621  3 +  28871421 AG----------------------------T
i Pteropus_alecto.KB030862.1                             T 62 I 2
s Pteropus_vampyrus.KN534172.1                                1558  3 -      8028 AG----------------------------T
i Pteropus_vampyrus.KN534172.1                           T 62 I 2
s Puma_concolor.QAVW01001104.1                            20270242  3 -  38429054 AC----------------------------T
i Puma_concolor.QAVW01001104.1                           T 57 I 3
s Pygathrix_cinerea.k141_1153803                              9744  4 -     91421 TG---------------------------TT
i Pygathrix_cinerea.k141_1153803                         T 70 I 2
s Pygathrix_nigripes_b.ctg100                                 7603878  4 +   7812017 TG---------------------------TT
i Pygathrix_nigripes_b.ctg100                               T 70 I 2
s Pygathrix_nigripes_a.k141_215492                              9717  4 -     72585 TG---------------------------TT
i Pygathrix_nigripes_a.k141_215492                         T 70 I 2
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4837  3 +     55207 AT----------------------------T
i Rangifer_tarandus.RanTarSib_scaffold_29737             T 63 I 2
s Rhinolophus_sinicus.LVEH01000134.1                        366854  3 -   3329780 AG----------------------------T
i Rhinolophus_sinicus.LVEH01000134.1                     T 64 I 2
s Rhinopithecus_bieti.k119_217274                             1130  4 -     11128 TG---------------------------TT
i Rhinopithecus_bieti.k119_217274                        T 370 I 2
s Rhinopithecus_roxellana.NC_044550.1                     91230507  4 - 195417433 TG---------------------------TT
i Rhinopithecus_roxellana.NC_044550.1                    T 350 I 2
s Rhinopithecus_strykeri.ctg102                            7666215  4 +   7961872 TG---------------------------TT
i Rhinopithecus_strykeri.ctg102                          T 290 I 2
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84606  3 -     96226 AA----------------------------T
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            T 63 I 3
s Saiga_tatarica.SaiTat_scaffold_373180                       3490  2 +      4321 A-----------------------------T
i Saiga_tatarica.SaiTat_scaffold_373180                  T 63 I 2
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151336  1 -    313613 ------------------------------T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 T 30 I 2
s Semnopithecus_entellus.k141_11662                          14259  4 -     19888 TG---------------------------TT
i Semnopithecus_entellus.k141_11662                      T 70 I 2
s Semnopithecus_hypoleucos.k141_1615806                      21464  4 +     39453 TG---------------------------TT
i Semnopithecus_hypoleucos.k141_1615806                  T 70 I 2
s Semnopithecus_johnii.k141_670120                            1988  4 +     27826 TG---------------------------TT
i Semnopithecus_johnii.k141_670120                       T 70 I 2
s Semnopithecus_priam.k141_638794                             1510  4 -     19483 TG---------------------------TT
i Semnopithecus_priam.k141_638794                        T 70 I 2
s Semnopithecus_schistaceus.k141_1584426                      1572  4 +      7198 TG---------------------------TT
i Semnopithecus_schistaceus.k141_1584426                 T 70 I 2
s Semnopithecus_vetulus.k141_1200928                          9832  4 +     15514 TG---------------------------TT
i Semnopithecus_vetulus.k141_1200928                     T 70 I 2
s Solenodon_paradoxus.SolPar_flattened_line_5840            187626  3 -    191337 AG----------------------------T
i Solenodon_paradoxus.SolPar_flattened_line_5840         T 64 I 2
s Sorex_araneus.JH798187.1                                13646972  3 -  18376816 TG----------------------------A
i Sorex_araneus.JH798187.1                               T 48 I 2
s Spermophilus_dauricus.KZ294078.1                         1948165  3 -   3870691 GG----------------------------T
i Spermophilus_dauricus.KZ294078.1                       T 59 I 2
s Spilogale_gracilis.SpiGra_flattened_line_13525             27153  3 +     97271 AA----------------------------T
i Spilogale_gracilis.SpiGra_flattened_line_13525         T 65 I 3
s Suricata_suricatta.SurSur_flattened_line_6629              14160  3 -    196729 AC----------------------------T
i Suricata_suricatta.SurSur_flattened_line_6629          T 57 I 3
s Sus_scrofa.CM000828.4                                   62882408  3 -  69701581 AA----------------------------T
i Sus_scrofa.CM000828.4                                  T 51 I 2
s Symphalangus_syndactylus.tarseq_199                      1088015  4 -   1523678 TG---------------------------CT
i Symphalangus_syndactylus.tarseq_199                    I 137 I 2
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6759  3 +     41958 AG----------------------------C
i Tadarida_brasiliensis.TadBra_scaffold_25820            T 63 I 2
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69404  3 +    116680 GA----------------------------T
i Tamandua_tetradactyla.TamTet_scaffold_1782             T 63 I 2
s Tapirus_indicus.TapInd_scaffold_9301                      115141  3 -    156842 AG----------------------------T
i Tapirus_indicus.TapInd_scaffold_9301                   T 64 I 2
s Tapirus_terrestris.TapTer_scaffold_755                    383596  3 +    539355 AG----------------------------T
i Tapirus_terrestris.TapTer_scaffold_755                 T 64 I 2
s Tarsius_lariang.k141_2201908                               10589  4 +     70052 GG--G-------------------------T
i Tarsius_lariang.k141_2201908                           T 65 I 2
s Tarsius_wallacei.k141_780063                               14894  4 +     25099 GG--G-------------------------T
i Tarsius_wallacei.k141_780063                           T 65 I 2
s Theropithecus_gelada.CM009954.1                        186422838  4 + 186847797 TG---------------------------CT
i Theropithecus_gelada.CM009954.1                        T 70 I 2
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103123  3 +    114563 GG----------------------------T
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           T 63 I 2
s Tonatia_saurophila.TonSau_scaffold_294                     78899  3 +    610378 AG----------------------------T
i Tonatia_saurophila.TonSau_scaffold_294                 T 64 I 2
s Trachypithecus_auratus.k141_722599                          5569  4 -     20410 TG---------------------------TT
i Trachypithecus_auratus.k141_722599                     T 67 I 2
s Trachypithecus_crepusculus.k141_1194022                     9761  4 +     15221 TG---------------------------TT
i Trachypithecus_crepusculus.k141_1194022                T 70 I 2
s Trachypithecus_cristatus.k141_580354                        5669  4 +     19930 TG---------------------------TT
i Trachypithecus_cristatus.k141_580354                   T 67 I 2
s Trachypithecus_francoisi.k141_1412647                       2096  4 -     19997 TG---------------------------TT
i Trachypithecus_francoisi.k141_1412647                  T 70 I 2
s Trachypithecus_geei.k141_277701                            42215  4 -     60166 TG---------------------------TT
i Trachypithecus_geei.k141_277701                        T 70 I 2
s Trachypithecus_germaini.k141_912491                         9687  4 -     27529 TG---------------------------TT
i Trachypithecus_germaini.k141_912491                    T 70 I 2
s Trachypithecus_hatinhensis.k141_143409                      9627  4 -     18194 TG---------------------------TT
i Trachypithecus_hatinhensis.k141_143409                 T 70 I 2
s Trachypithecus_laotum.k141_907409                           3363  4 -     21137 TG---------------------------TT
i Trachypithecus_laotum.k141_907409                      T 70 I 2
s Trachypithecus_leucocephalus.k141_587342                    2065  4 -     10723 TG---------------------------TT
i Trachypithecus_leucocephalus.k141_587342               T 70 I 2
s Trachypithecus_melamera.k141_434728                         1218  4 +      9834 TG---------------------------TT
i Trachypithecus_melamera.k141_434728                    T 70 I 2
s Trachypithecus_obscurus.k141_190785                        19536  4 +     32220 TG---------------------------TT
i Trachypithecus_obscurus.k141_190785                    T 70 I 2
s Trachypithecus_phayrei.ctg124                            5933633  4 +   6242583 TG---------------------------TT
i Trachypithecus_phayrei.ctg124                          T 70 I 2
s Trachypithecus_pileatus.k141_2007326                        2878  4 +     20839 TG---------------------------TT
i Trachypithecus_pileatus.k141_2007326                   T 70 I 2
s Tragulus_javanicus.TraJav_scaffold_140459                    615  3 -      1748 AG----------------------------T
i Tragulus_javanicus.TraJav_scaffold_140459              T 55 I 2
s Tupaia_chinensis.KB320699.1                              2149526  3 +   4065304 GG----------------------------T
i Tupaia_chinensis.KB320699.1                            T 91 I 29
s Tupaia_tana.TupTan_flattened_line_97126                     3145  3 -     10553 GG----------------------------T
i Tupaia_tana.TupTan_flattened_line_97126                T 63 I 2
s Tursiops_truncatus.MRVK01000835.1                       15737623  3 +  33153633 AG----------------------------T
i Tursiops_truncatus.MRVK01000835.1                      T 64 I 2
s Uropsilus_gracilis.UroGra_scaffold_97021                    1854  3 -      4736 AG----------------------------T
i Uropsilus_gracilis.UroGra_scaffold_97021               T 64 I 2
s Ursus_maritimus.KK499267.1                               4846854  3 -   5085361 AC----------------------------T
i Ursus_maritimus.KK499267.1                             T 65 I 3
s Vicugna_pacos.KN270157.1                                 5368327  3 -   5488506 AG----------------------------T
i Vicugna_pacos.KN270157.1                               T 64 I 2
s Vulpes_lagopus.VulLag_flattened_line_30954                  7331  3 -     43706 GC----------------------------T
i Vulpes_lagopus.VulLag_flattened_line_30954             T 65 I 3
s Xerus_inauris.XerIna_scaffold_48378                        19660  3 -     24430 GG----------------------------T
i Xerus_inauris.XerIna_scaffold_48378                    T 59 I 2
s Zalophus_californianus.ZalCal_flattened_line_63728          1779  3 +      2932 AC----------------------------T
i Zalophus_californianus.ZalCal_flattened_line_63728     T 65 I 3
s Zapus_hudsonius.ZapHud_scaffold_11398                       9937  3 +     63895 GC----------------------------C
i Zapus_hudsonius.ZapHud_scaffold_11398                  T 64 I 2
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11315  3 +     12536 AG----------------------------T
i Ziphius_cavirostris.ZipCav_flattened_line_71469        T 64 I 2
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   1853 47 +      8208 T
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Papio_papio.k141_802527                                     3586 54 +     27711 T
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.KL204047.1                            2025508 59 -   3037898 T
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5119 58 +     14753 T
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    15418  9 -    145209 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            4795 47 -      6351 T
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1057 2 +     62944 AT
s Gorilla_beringei.k141_3596273                              10358 2 -     32273 AT
i Gorilla_beringei.k141_3596273                          T 140 I 140
s Gorilla_gorilla.LT578341.1                             186332508 2 + 186649187 AT
i Gorilla_gorilla.LT578341.1                             T 140 I 140
s Pan_paniscus.KQ411613.1                                    38547 2 +     80009 at
i Pan_paniscus.KQ411613.1                                I 67 T 2405
s Pan_troglodytes.CM009242.2                             189137302 2 + 189151597 at
i Pan_troglodytes.CM009242.2                             T 209 T 69
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Loris_tardigradus.ctg83                                   999471 2 +   6120653 I
e Loris_lydekkerianus.k141_2539221                             636 2 +     11245 I
e Perodicticus_potto.k141_1092580                             2985 2 +     25941 I
e Perodicticus_ibeanus.k141_855320                            4617 2 +     13100 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            11318 2 +     12536 I
e Zapus_hudsonius.ZapHud_scaffold_11398                       9940 2 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_63728          1782 3 +      2932 I
e Xerus_inauris.XerIna_scaffold_48378                        19663 2 -     24430 I
e Vulpes_lagopus.VulLag_flattened_line_30954                  7334 3 -     43706 I
e Vicugna_pacos.KN270157.1                                 5368330 2 -   5488506 I
e Varecia_variegata.k141_1128296                              7155 0 +     24756 C
e Varecia_rubra.k141_590885                                   7107 0 +     50397 C
e Ursus_maritimus.KK499267.1                               4846857 3 -   5085361 I
e Uropsilus_gracilis.UroGra_scaffold_97021                    1857 2 -      4736 I
e Tursiops_truncatus.MRVK01000835.1                       15737626 2 +  33153633 I
e Tupaia_tana.TupTan_flattened_line_97126                     3148 2 -     10553 I
e Tupaia_chinensis.KB320699.1                              2149529 29 +   4065304 I
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                    618 2 -      1748 I
e Trachypithecus_pileatus.k141_2007326                        2882 2 +     20839 I
e Trachypithecus_phayrei.ctg124                            5933637 2 +   6242583 I
e Trachypithecus_obscurus.k141_190785                        19540 2 +     32220 I
e Trachypithecus_melamera.k141_434728                         1222 2 +      9834 I
e Trachypithecus_leucocephalus.k141_587342                    2069 2 -     10723 I
e Trachypithecus_laotum.k141_907409                           3367 2 -     21137 I
e Trachypithecus_hatinhensis.k141_143409                      9631 2 -     18194 I
e Trachypithecus_germaini.k141_912491                         9691 2 -     27529 I
e Trachypithecus_geei.k141_277701                            42219 2 -     60166 I
e Trachypithecus_francoisi.k141_1412647                       2100 2 -     19997 I
e Trachypithecus_cristatus.k141_580354                        5673 2 +     19930 I
e Trachypithecus_crepusculus.k141_1194022                     9765 2 +     15221 I
e Trachypithecus_auratus.k141_722599                          5573 2 -     20410 I
e Tonatia_saurophila.TonSau_scaffold_294                     78902 2 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   1853 47 +      8208 T
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103126 2 +    114563 I
e Theropithecus_gelada.CM009954.1                        186422842 2 + 186847797 I
e Tarsius_wallacei.k141_780063                               14898 2 +     25099 I
e Tarsius_lariang.k141_2201908                               10593 2 +     70052 I
e Tapirus_terrestris.TapTer_scaffold_755                    383599 2 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      115144 2 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 69407 2 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                 6762 2 +     41958 I
e Symphalangus_syndactylus.tarseq_199                      1088019 2 -   1523678 I
e Sus_scrofa.CM000828.4                                   62882411 2 -  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629              14163 3 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             27156 3 +     97271 I
e Spermophilus_dauricus.KZ294078.1                         1948168 2 -   3870691 I
e Sorex_araneus.JH798187.1                                13646975 2 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_5840            187629 2 -    191337 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Semnopithecus_vetulus.k141_1200928                          9836 2 +     15514 I
e Semnopithecus_schistaceus.k141_1584426                      1576 2 +      7198 I
e Semnopithecus_priam.k141_638794                             1514 2 -     19483 I
e Semnopithecus_johnii.k141_670120                            1992 2 +     27826 I
e Semnopithecus_hypoleucos.k141_1615806                      21468 2 +     39453 I
e Semnopithecus_entellus.k141_11662                          14263 2 -     19888 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    151337 2 -    313613 I
e Saiga_tatarica.SaiTat_scaffold_373180                       3492 2 +      4321 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                84609 3 -     96226 I
e Rhinopithecus_strykeri.ctg102                            7666219 2 +   7961872 I
e Rhinopithecus_roxellana.NC_044550.1                     91230511 2 - 195417433 I
e Rhinopithecus_bieti.k119_217274                             1134 2 -     11128 I
e Rhinolophus_sinicus.LVEH01000134.1                        366857 2 -   3329780 I
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4840 2 +     55207 I
e Pygathrix_nigripes_a.k141_215492                              9721 2 -     72585 I
e Pygathrix_nigripes_b.ctg100                                 7603882 2 +   7812017 I
e Pygathrix_cinerea.k141_1153803                              9748 2 -     91421 I
e Puma_concolor.QAVW01001104.1                            20270245 3 -  38429054 I
e Pteropus_vampyrus.KN534172.1                                1561 2 -      8028 I
e Pteropus_alecto.KB030862.1                              22973624 2 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         36614 3 +     42204 I
e Pteronotus_parnellii.KE909381.1                            11146 2 -     21811 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Propithecus_verreauxi.k141_956661                            365 2 -      6182 I
e Propithecus_tattersalli.k141_790011                        24120 2 -     67325 I
e Propithecus_perrieri.k141_1200571                            308 2 -     24134 I
e Propithecus_edwardsi.k141_1176054                          22125 2 +     35766 I
e Propithecus_diadema.k141_357118                              767 2 +      4256 I
e Propithecus_coronatus.k141_347390                          24606 2 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     986317 2 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2592414 0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                  9940 2 -     22811 I
e Presbytis_mitrata.k141_2342859                              9746 2 +     10147 I
e Presbytis_comata.k141_677006                               67919 2 -     81375 I
e Pongo_pygmaeus.ctg66                                     9565297 272 +   9816681 T
e Pongo_abelii.CM009266.2                                189125693 511 + 189387572 T
e Platanista_gangetica.PlaMin_flattened_line_32310           34132 2 +     35617 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              378 2 +     22620 I
e Piliocolobus_tephrosceles.PDMG02000141.1                14290639 2 -  14605196 I
e Piliocolobus_kirkii.k141_448987                            34418 2 +     51399 I
e Piliocolobus_gordonorum.k141_381342                        33002 2 +     89929 I
e Piliocolobus_badius.k141_1234363                           38275 2 +     62158 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               8426 2 +     63832 I
e Petromus_typicus.PetTyp_scaffold_42190                     25785 2 -     29689 I
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25300 2 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8813 3 -     78924 I
e Papio_ursinus.k141_3428135                                  3419 2 +      9205 I
e Papio_papio.k141_802527                                     3586 54 +     27711 T
e Papio_kindae.k141_1936966                                    141 2 +     41871 I
e Papio_hamadryas.Contig39                                20558017 2 +  20919399 I
e Papio_cynocephalus.k141_4307930                             1398 2 +     20448 I
e Papio_anubis.CM001495.2                                183437333 2 + 183742232 I
e Pantholops_hodgsonii.KE114653.1                          1264304 2 -   2937107 I
e Panthera_tigris.KE722367.1                               4716934 3 -   8748460 I
e Panthera_pardus.KV860321.1                                259787 3 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  147078 3 +    230217 I
e Ovis_canadensis.OviCan_scaffold_2572                      173371 2 -    191736 I
e Ovis_aries.CM001607.2                                   17584950 2 +  44047080 I
e Otocyon_megalotis.JAEUCK010005147.1                       458673 3 -    559221 I
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               6777 2 -     18566 I
e Orcinus_orca.KB316932.1                                  2781379 2 -  10937097 I
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144592 2 +    630418 I
e Odobenus_rosmarus.KB229312.1                              500660 3 -   2017862 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1355700 2 +   3988456 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744867 2 + 199412804 I
e Nycticebus_coucang.k141_5327727                             2126 2 +      8486 I
e Nycticebus_bengalensis.LG01                            102574440 2 - 196305487 I
e Nyctereutes_procyonoides.CAJHUB010000658.1               9145919 3 -   9404916 I
e Noctilio_leporinus.NocLep_scaffold_251                    756328 2 +    783361 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5865464 2 +   7148211 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nasalis_larvatus.k141_413338                                9759 2 +     21681 I
e Nannospalax_galili.KL204047.1                            2025508 59 -   3037898 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186045 2 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_28916                        32564 2 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902005 2 -   4330536 I
e Myotis_davidii.KB100139.1                                1585796 2 -   6019432 I
e Myotis_brandtii.KE162005.1                                278239 2 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               297603 3 -  14710649 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              2285 2 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           5119 58 +     14753 T
e Mungos_mungo.MunMun_flattened_line_23663                   31294 3 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_61429                  27359 2 -     27816 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 137764 2 -    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                    26508 2 -    437263 I
e Mirza_zaza.k141_952172                                      4618 2 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_22144        62371 3 -     63350 I
e Miopithecus_ogouensis.k141_534055                           3746 2 -     28506 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             32908 2 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1849032 2 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                13358 2 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15418 9 -    145209 I
e Microcebus_murinus.CM007674.1                           18283263 2 -  93316391 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3003 2 +     10310 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365              6172 3 +     13704 I
e Megaderma_lyra.MegLyr_scaffold_4542                         6732 2 -    207569 I
e Marmota_marmota.CZRN01000018.1                          33097376 2 -  40650429 I
e Manis_pentadactyla.KN006162.1                              46935 2 -    317179 I
e Manis_javanica.JSZB01003497.1                              15546 2 +    737560 I
e Mandrillus_sphinx.Contig270                               346189 2 +    752769 I
e Mandrillus_leucophaeus.scaffold280                      23932011 2 -  24302211 I
e Macroglossus_sobrinus.MacSob_scaffold_8222                 87501 2 +     94391 I
e Macaca_tonkeana.k141_1498238                               20456 2 -     45290 I
e Macaca_thibetana.k99_7456                                  15659 2 -     15935 I
e Macaca_silenus.Contig273                                  324390 2 -    668171 I
e Macaca_siberu.k141_635500                                   1517 2 -     14993 I
e Macaca_radiata.k141_3680011                                 1716 2 +     20474 I
e Macaca_nigra.k141_1655396                                  74719 2 +     89720 I
e Macaca_nemestrina.KQ007038.1                            25452519 2 -  25927173 I
e Macaca_mulatta.NC_041758.1                             186833958 2 + 187317192 I
e Macaca_maura.k141_2733130                                  18870 2 +     37952 I
e Macaca_leonina.k141_3550399                                10303 2 -     29190 I
e Macaca_fuscata.k119_255327                                   850 2 -     23192 I
e Macaca_fascicularis.k141_814140                            75131 2 -    114318 I
e Macaca_cyclopis.k119_18836                                  7337 2 -     26193 I
e Macaca_assamensis.Contig5                               59670839 2 +  60120075 I
e Macaca_arctoides.k141_2326796                               1579 2 +     40492 I
e Lycaon_pictus.CM007581.1                                17951658 3 -  59628241 I
e Loxodonta_africana.GL010049.1                            4214452 2 -  43346337 I
e Lophocebus_aterrimus.ctg367                              1431394 2 +   1826925 I
e Lipotes_vexillifer.KE559953.1                             267416 2 -    662738 I
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3036041 3 +   3914936 I
e Lepilemur_septentrionalis.k141_185316                      22739 2 +     54090 I
e Lepilemur_ruficaudatus.k141_420445                         31595 2 -     32627 I
e Lepilemur_dorsalis.k141_577674                             24684 2 +     45836 I
e Lepilemur_ankaranensis.k141_596936                          6737 2 -     23766 I
e Lemur_catta.scaffold_24                                 15519761 0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12178 7 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                1602 2 -      3359 I
e Jaculus_jaculus.JH725527.1                               8271306 2 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_48101               22335 2 +     23964 I
e Indri_indri.k141_3655594                                   18103 2 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7514526 2 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      80859 2 +    135385 I
e Hylobates_pileatus_a.tarseq_633                            3330871 2 -  11177569 I
e Hylobates_pileatus_b.LG02                                     189537978 203 - 191637585 T
e Hylobates_klossii.k141_282416                              54326 2 +     67168 I
e Hylobates_agilis.k141_307679                               12321 2 -     15490 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19785 2 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  40558 3 +     55795 I
e Hoolock_leuconedys.ctg274                                    429403 0 +    630532 C
e Hipposideros_galeritus.HipGal_scaffold_29171               39754 2 +     43066 I
e Hipposideros_armiger.JXIK01000431.1                       108313 2 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               111974 2 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 179 2 +       961 I
e Heterocephalus_glaber.JH602082.1                        20659316 2 +  22651954 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17419 2 +     36099 I
e Helogale_parvula.HelPar_flattened_line_2585               238093 3 +    327341 I
e Hapalemur_occidentalis.k141_907772                          9234 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402 0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298 0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517 0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   30020 2 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            30292 2 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_56069               25401 2 +     26054 I
e Galagoides_demidoff.k141_31856                              3134 2 -      3432 I
e Fukomys_damarensis.KN121974.1                             848437 2 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  5456 3 -     36744 I
e Felis_catus_fca126.CM031415.1                           20191931 3 + 205367284 I
e Eulemur_sanfordi.k141_1122526                               9432 0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267 0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247 0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321 0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369 0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369 0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184 0 -     25546 C
e Eulemur_collaris.k141_377015                                2154 0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453 0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             24731 2 -     44125 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           10794 2 +    133382 I
e Erythrocebus_patas.Contig38                             21199869 2 -  21539334 I
e Erinaceus_europaeus.JH835339.1                           3325279 2 -   7059049 I
e Equus_przewalskii.KK951119.1                               29525 2 +    498745 I
e Equus_caballus.CM000403.2                               18527510 2 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1279689 2 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2144004 2 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16325708 3 -  41312741 I
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1088942 2 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       310219 2 +    607251 I
e Eidolon_helvum.KE759718.1                                   7354 3 +     11740 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 31427 2 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  11953 2 +     14536 I
e Dipodomys_ordii.KN672350.1                              18895743 2 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    34213 2 +     67921 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    2422 2 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  669347 2 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8627847 2 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16811118 2 +  35494412 I
e Daubentonia_madagascariensis.ctg71                      12532831 2 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            61007 2 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1170 2 +      3576 I
e Cuniculus_paca.CunPac_flattened_line_231100                 2787 2 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             24176 3 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_603213              1028 3 +      1923 T
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          10435 2 -     20389 I
e Condylura_cristata.JH655891.1                           17545923 2 -  53390261 I
e Colobus_polykomos.k141_906115                              31706 2 +     84244 I
e Colobus_guereza.LG01                                   199944812 2 + 200372422 I
e Colobus_angolensis.KN981557.1                            1905167 2 +   2368649 I
e Choloepus_hoffmanni.KN194906.1                            170193 2 +    839153 I
e Choloepus_didactylus.ChoDid_scaffold_45914                 15094 2 +     19366 I
e Chlorocebus_sabaeus.CM001947.1                         135416638 2 + 135778131 I
e Chlorocebus_pygerythrus.k141_1025673                        9633 2 -     50209 I
e Chlorocebus_aethiops.ctg25                              18423190 2 -  18827391 I
e Chinchilla_lanigera.JH722012.1                           1248435 2 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           12014 2 +     57038 I
e Cheirogaleus_major.k141_333249                             16665 2 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            4795 47 -      6351 T
e Cercopithecus_roloway.k141_3180641                         39721 2 -     41420 I
e Cercopithecus_pogonias.k141_822820                          9227 2 +     17596 I
e Cercopithecus_petaurista.k141_807961                        9251 2 -     27947 I
e Cercopithecus_nictitans.k141_3278028                        1738 2 +      7159 I
e Cercopithecus_neglectus.k141_2526306                       34446 2 -     53127 I
e Cercopithecus_mona.ctg39                                21217326 2 -  21565898 I
e Cercopithecus_albogularis.ctg5                                38811635 2 +  39242232 I
e Cercopithecus_lowei.k141_457449                             9259 2 -     11289 I
e Cercopithecus_hamlyni.k141_187466                           9240 2 -     27936 I
e Cercopithecus_diana.k141_2427854                             905 2 +      9989 I
e Cercopithecus_cephus.k141_1078548                           6552 2 +     29689 I
e Cercopithecus_ascanius.k141_1024104                         3568 2 -     20310 I
e Cercocebus_torquatus.k141_3057011                           3422 2 +     27781 I
e Cercocebus_lunulatus.k141_3846941                           3192 2 +      8260 I
e Cercocebus_chrysogaster.k141_393940                         8773 2 -     19203 I
e Cercocebus_atys.KQ010504.1                               4470224 2 +   4669795 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2532 2 -      3715 I
e Cephalopachus_bancanus.k141_2037105                         4894 2 -      8605 I
e Cavia_tschudii.CavTsc_scaffold_8919                        98538 2 +    143979 I
e Cavia_porcellus.DS562891.1                              18359663 2 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18347403 2 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     89148 2 +    217609 I
e Castor_canadensis.CasCan_scaffold_2074                    133584 2 +    179628 I
e Carollia_perspicillata.CarPer_scaffold_92756                2816 2 -     11696 I
e Carlito_syrichta.NW_007259797.1                           140978 2 -    496798 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18059935 2 -  44709034 I
e Capra_aegagrus.CM003241.1                               18829215 2 +  46296322 I
e Canis_lupus_orion.HG994398.1                            18496719 3 +  63665305 I
e Canis_lupus_familiaris.chr16                            17955418 3 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9031154 3 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    181767 3 -    185531 I
e CanFam4.chr16                                           17795710 3 -  60362399 I
e Camelus_ferus.KB017975.1                                  399581 2 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2331305 2 -   7040546 I
e Camelus_bactrianus.KN276810.1                            9998841 2 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2818390 2 +   4408762 I
e Bos_taurus.CM000203.6                                   18082901 2 +  45695690 I
e Bos_mutus.JH880303.1                                     1124823 2 -   1948126 I
e Bos_indicus.CM003047.1                                  20272263 2 +  48749331 I
e Bison_bison.KN261452.1                                    199058 2 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    26019 2 +     34529 I
e Balaenoptera_bonaerensis.DF707048.1                         1948 2 -     18090 I
e Balaenoptera_acutorostrata.KI537508.1                   15191482 2 +  23207421 I
e Avahi_peyrierasi.k141_1424874                              49871 2 +     85213 I
e Avahi_laniger.k141_765380                                  49246 2 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  2398 2 +     43469 I
e Arctocebus_calabarensis.k141_288239                        14384 2 +     17124 I
e Aplodontia_rufa.AprRuf_scaffold_68852                       7206 2 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             97549 2 -    100397 I
e Anoura_caudifer.AnoCau_scaffold_1412                      183046 2 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          675097 2 -   2318259 I
e Allochrocebus_solatus.k141_166128                            463 2 -     12518 I
e Allochrocebus_preussi.k141_310680                           9306 2 -      9772 I
e Allochrocebus_lhoesti.k141_4309873                          9180 2 -     28001 I
e Allenopithecus_nigroviridis.k141_3361533                    9253 2 -     52922 I
e Allactaga_bullata.AllBul_scaffold_9566                     64926 2 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             75146 3 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9506923 2 -  29979442 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           823231 3 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1059 10 +     62944 G-TT---ACAG-GA-A
s Acinonyx_jubatus.LLWD01001279.1                           823234 10 -   1699592 A-TT---GTAA-GA-A
i Acinonyx_jubatus.LLWD01001279.1                        I 3 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506925 10 -  29979442 G-TT---AGAG-GA-A
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 2 C 0
s Ailurus_fulgens.LNAC01001112.1                             75149 10 -    347723 A-TT---AGAG-GA-T
i Ailurus_fulgens.LNAC01001112.1                         I 3 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64928 10 -     89534 A-TT---AGAG-GA-A
i Allactaga_bullata.AllBul_scaffold_9566                 I 2 I 8
s Allenopithecus_nigroviridis.k141_3361533                    9255 10 -     52922 G-TT---AGAG-GA-A
i Allenopithecus_nigroviridis.k141_3361533               I 2 C 0
s Allochrocebus_lhoesti.k141_4309873                          9182 10 -     28001 G-TT---AGAG-GA-A
i Allochrocebus_lhoesti.k141_4309873                     I 2 C 0
s Allochrocebus_preussi.k141_310680                           9308 10 -      9772 G-TT---AGAG-GA-A
i Allochrocebus_preussi.k141_310680                      I 2 C 0
s Allochrocebus_solatus.k141_166128                            465 10 -     12518 G-TT---AGAG-GA-A
i Allochrocebus_solatus.k141_166128                      I 2 C 0
s Ammotragus_lervia.NIVO01071767.1                          675099 10 -   2318259 A-TT---AGGG-GA-A
i Ammotragus_lervia.NIVO01071767.1                       I 2 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183048 10 +    412891 T-CC---AGGG-GA-A
i Anoura_caudifer.AnoCau_scaffold_1412                   I 2 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97551 10 -    100397 A-TT---AGAG-GA-A
i Antilocapra_americana.AntAmePen_scaffold_12469         I 2 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7208 10 +     20879 A-TG---AAAG-AA-A
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 2 I 8
s Arctocebus_calabarensis.k141_288239                        14386 10 +     17124 G-TA---AGAG-GA-A
i Arctocebus_calabarensis.k141_288239                    I 2 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2400 10 +     43469 A-TT---AGGG-GA-A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 2 C 0
s Avahi_laniger.k141_765380                                  49248 10 -     92717 G-TT---AGAG-GA-A
i Avahi_laniger.k141_765380                              I 2 I 2
s Avahi_peyrierasi.k141_1424874                              49873 10 +     85213 G-TT---AGAG-GA-A
i Avahi_peyrierasi.k141_1424874                          I 2 I 2
s Balaenoptera_acutorostrata.KI537508.1                   15191484 10 +  23207421 A-TT---AGAG-GA-A
i Balaenoptera_acutorostrata.KI537508.1                  I 2 C 0
s Balaenoptera_bonaerensis.DF707048.1                         1950 10 -     18090 A-TT---AGAG-GA-A
i Balaenoptera_bonaerensis.DF707048.1                    I 2 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26021 10 +     34529 A-TT---AGGG-GA-A
i Beatragus_hunteri.BeaHun_scaffold_50177                I 2 C 0
s Bison_bison.KN261452.1                                    199060 10 -    288883 A-TT---AGAG-GA-A
i Bison_bison.KN261452.1                                 I 2 C 0
s Bos_indicus.CM003047.1                                  20272265 10 +  48749331 A-TT---AGAG-GA-A
i Bos_indicus.CM003047.1                                 I 2 C 0
s Bos_mutus.JH880303.1                                     1124825 10 -   1948126 A-TT---AGAG-GA-A
i Bos_mutus.JH880303.1                                   I 2 C 0
s Bos_taurus.CM000203.6                                   18082903 10 +  45695690 A-TT---AGAG-GA-A
i Bos_taurus.CM000203.6                                  I 2 C 0
s Bubalus_bubalis.KI419123.1                               2818392 10 +   4408762 A-TT---AGAG-GA-A
i Bubalus_bubalis.KI419123.1                             I 2 C 0
s Camelus_bactrianus.KN276810.1                            9998843 10 -  17673402 G-TT---AGAG-GA-A
i Camelus_bactrianus.KN276810.1                          I 2 C 0
s Camelus_dromedarius.KN272107.1                           2331307 10 -   7040546 G-TT---AGAG-GA-A
i Camelus_dromedarius.KN272107.1                         I 2 C 0
s Camelus_ferus.KB017975.1                                  399583 10 -   1652518 G-TT---AGAG-GA-A
i Camelus_ferus.KB017975.1                               I 2 C 0
s CanFam4.chr16                                           17795713 10 -  60362399 A-TT---ATAG-GA-A
i CanFam4.chr16                                          I 3 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181770 10 -    185531 A-TT---ATAG-GA-A
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 3 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031157 10 -   9314153 A-TT---ATAG-GA-A
i Canis_lupus_dingo.QKWQ01000480.1                       I 3 C 0
s Canis_lupus_familiaris.chr16                            17955421 10 -  59632846 A-TT---ATAG-GA-A
i Canis_lupus_familiaris.chr16                           I 3 C 0
s Canis_lupus_orion.HG994398.1                            18496722 10 +  63665305 A-TT---ATAG-GA-A
i Canis_lupus_orion.HG994398.1                           I 3 C 0
s Capra_aegagrus.CM003241.1                               18829217 10 +  46296322 A-TC---AGGG-GG-A
i Capra_aegagrus.CM003241.1                              I 2 C 0
s Capra_hircus.CM004588.1                                 18059937 10 -  44709034 A-TC---AGGG-GG-A
i Capra_hircus.CM004588.1                                I 2 C 0
s Carlito_syrichta.NW_007259797.1                           140980 10 -    496798 G-TT---AGAg-aa-a
i Carlito_syrichta.NW_007259797.1                        I 2 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2818 10 -     11696 A-CT---AGGG-GA-G
i Carollia_perspicillata.CarPer_scaffold_92756           I 2 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133586 10 +    179628 A-TC---AGAG-GG-A
i Castor_canadensis.CasCan_scaffold_2074                 I 2 I 6
s Catagonus_wagneri.CatWag_scaffold_2839                     89150 10 +    217609 A-CT---AGAG-GA-C
i Catagonus_wagneri.CatWag_scaffold_2839                 I 2 C 0
s Cavia_aperea.AVPZ01000300.1                             18347405 10 -  23392119 A-TT---ACAG-GA-A
i Cavia_aperea.AVPZ01000300.1                            I 2 I 7
s Cavia_porcellus.DS562891.1                              18359665 10 -  23407841 A-TT---ACAG-GA-A
i Cavia_porcellus.DS562891.1                             I 2 I 7
s Cavia_tschudii.CavTsc_scaffold_8919                        98540 10 +    143979 A-TT---ACAG-GA-A
i Cavia_tschudii.CavTsc_scaffold_8919                    I 2 I 7
s Cephalopachus_bancanus.k141_2037105                         4896 10 -      8605 G-TT---AGAG-AA-A
i Cephalopachus_bancanus.k141_2037105                    I 2 C 0
s Ceratotherium_simum.JH767749.1                          12227816 10 +  27778364 A-TT---AGAG-GA-A
i Ceratotherium_simum.JH767749.1                         I 2 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2534 10 -      3715 A-TT---AGAG-GA-A
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     I 2 C 0
s Cercocebus_atys.KQ010504.1                               4470226 10 +   4669795 G-TT---AGAG-GA-A
i Cercocebus_atys.KQ010504.1                             I 2 C 0
s Cercocebus_chrysogaster.k141_393940                         8775 10 -     19203 G-TT---AGAG-GA-A
i Cercocebus_chrysogaster.k141_393940                    I 2 C 0
s Cercocebus_lunulatus.k141_3846941                           3194 10 +      8260 G-TT---AGAG-GA-A
i Cercocebus_lunulatus.k141_3846941                      I 2 C 0
s Cercocebus_torquatus.k141_3057011                           3424 10 +     27781 G-TT---AGAG-GA-A
i Cercocebus_torquatus.k141_3057011                      I 2 C 0
s Cercopithecus_ascanius.k141_1024104                         3570 10 -     20310 G-TT---AGAG-GA-A
i Cercopithecus_ascanius.k141_1024104                    I 2 C 0
s Cercopithecus_cephus.k141_1078548                           6554 10 +     29689 G-TT---AGAG-GA-A
i Cercopithecus_cephus.k141_1078548                      I 2 C 0
s Cercopithecus_diana.k141_2427854                             907 10 +      9989 G-TT---AGAA-GA-A
i Cercopithecus_diana.k141_2427854                       I 2 C 0
s Cercopithecus_hamlyni.k141_187466                           9242 10 -     27936 G-TT---AGAG-GA-A
i Cercopithecus_hamlyni.k141_187466                      I 2 C 0
s Cercopithecus_lowei.k141_457449                             9261 10 -     11289 G-TT---AGAG-GA-A
i Cercopithecus_lowei.k141_457449                        I 2 C 0
s Cercopithecus_albogularis.ctg5                                38811637 10 +  39242232 G-TT---AGAG-GA-A
i Cercopithecus_albogularis.ctg5                               I 2 C 0
s Cercopithecus_mona.ctg39                                21217328 10 -  21565898 G-TT---AGAG-GA-A
i Cercopithecus_mona.ctg39                               I 2 C 0
s Cercopithecus_neglectus.k141_2526306                       34448 10 -     53127 G-TT---AGAG-GA-A
i Cercopithecus_neglectus.k141_2526306                   I 2 C 0
s Cercopithecus_nictitans.k141_3278028                        1740 10 +      7159 G-TT---AGAG-GA-A
i Cercopithecus_nictitans.k141_3278028                   I 2 C 0
s Cercopithecus_petaurista.k141_807961                        9253 10 -     27947 G-TT---AGAG-GA-A
i Cercopithecus_petaurista.k141_807961                   I 2 C 0
s Cercopithecus_pogonias.k141_822820                          9229 10 +     17596 G-TT---AGAG-GA-A
i Cercopithecus_pogonias.k141_822820                     I 2 C 0
s Cercopithecus_roloway.k141_3180641                         39723 10 -     41420 G-TT---AGAG-GA-A
i Cercopithecus_roloway.k141_3180641                     I 2 C 0
s Cheirogaleus_major.k141_333249                             16667 10 -     52598 G-TT---AGAG-GA-A
i Cheirogaleus_major.k141_333249                         I 2 I 2
s Cheirogaleus_medius.k141_1055463                           12016 10 +     57038 G-TT---AGAG-GA-A
i Cheirogaleus_medius.k141_1055463                       I 2 I 2
s Chinchilla_lanigera.JH722012.1                           1248437 10 +   2543920 A-AT---ACAG-GA-A
i Chinchilla_lanigera.JH722012.1                         I 2 I 7
s Chlorocebus_aethiops.ctg25                              18423192 10 -  18827391 G-TT---AGAG-GA-A
i Chlorocebus_aethiops.ctg25                             I 2 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9635 10 -     50209 G-TT---AGAG-GA-A
i Chlorocebus_pygerythrus.k141_1025673                   I 2 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416640 10 + 135778131 G-TT---AGAG-GA-A
i Chlorocebus_sabaeus.CM001947.1                         I 2 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15096  9 +     19366 C-TA---AGG--GA-A
i Choloepus_didactylus.ChoDid_scaffold_45914             I 2 C 0
s Choloepus_hoffmanni.KN194906.1                            170195  9 +    839153 C-TA---AGG--GA-A
i Choloepus_hoffmanni.KN194906.1                         I 2 C 0
s Colobus_angolensis.KN981557.1                            1905169 10 +   2368649 G-TT---AGAG-GA-A
i Colobus_angolensis.KN981557.1                          I 2 C 0
s Colobus_guereza.LG01                                   199944814 10 + 200372422 G-TT---AGAG-GA-A
i Colobus_guereza.LG01                                   I 2 C 0
s Colobus_polykomos.k141_906115                              31708 10 +     84244 G-TT---AGAG-GA-A
i Colobus_polykomos.k141_906115                          I 2 C 0
s Condylura_cristata.JH655891.1                           17545925 10 -  53390261 A-CT---GGAG-AA-A
i Condylura_cristata.JH655891.1                          I 2 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10437 10 -     20389 G-TT---AGG--GAAA
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 2 C 0
s Crocidura_indochinensis.CroInd_scaffold_287352               330  2 +      4208 A-T-------------
i Crocidura_indochinensis.CroInd_scaffold_287352         T 35 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24179 10 -     87169 A-TT---ATAG-CA-A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 3 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2789 10 +      5455 A-TT---ACAG-GA-A
i Cuniculus_paca.CunPac_flattened_line_231100            I 2 I 7
s Dasyprocta_punctata.DasPun_flattened_line_206793            1172 10 +      3576 A-TT---ACAG-GA-A
i Dasyprocta_punctata.DasPun_flattened_line_206793       I 2 I 7
s Dasypus_novemcinctus.JH564415.1                            61009  9 +   2246927 C-TA---AGG--AA-G
i Dasypus_novemcinctus.JH564415.1                        I 2 C 0
s Daubentonia_madagascariensis.ctg71                      12532833 10 -  12879189 G-TT---AGAG-GA-A
i Daubentonia_madagascariensis.ctg71                     I 2 C 0
s Delphinapterus_leucas.KZ290073.1                        16811120 10 +  35494412 A-TT---AGAG-GA-A
i Delphinapterus_leucas.KZ290073.1                       I 2 C 0
s Desmodus_rotundus.KZ672289.1                             8627849 10 +  20541912 A-CT---AGGG-GA-A
i Desmodus_rotundus.KZ672289.1                           I 2 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669349 10 +   1390856 A-TT---AGAG-GA-A
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 2 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2424 10 +    198055 A-TT---AGAG-GA-A
i Diceros_bicornis.DicBicMic_scaffold_5955               I 2 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34215 10 +     67921 A-AT---ACAG-GA-A
i Dinomys_branickii.DinBra_scaffold_21862                I 2 I 7
s Dipodomys_ordii.KN672350.1                              18895745 10 +  37912305 A-TT---Caaa-ga-a
i Dipodomys_ordii.KN672350.1                             I 2 I 8
s Dipodomys_stephensi.DipSte_scaffold_75855                  11955 10 +     14536 A-TT---CAAA-GA-A
i Dipodomys_stephensi.DipSte_scaffold_75855              I 2 I 8
s Dolichotis_patagonum.DolPat_scaffold_30833                 31429 10 -     42551 A-TT---ACAG-GA-A
i Dolichotis_patagonum.DolPat_scaffold_30833             I 2 I 7
s Eidolon_helvum.KE759718.1                                   7357  9 +     11740 A-TT---AGG--GA-A
i Eidolon_helvum.KE759718.1                              I 3 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310221 10 +    607251 A-TT---AGAG-GA-A
i Elaphurus_davidianus.JRFZ01104969.1                    I 2 C 0
s Elephantulus_edwardii.JH947257.1                         1088944 10 +  10337057 C-TA---AAGG-GA-A
i Elephantulus_edwardii.JH947257.1                       I 2 C 0
s Enhydra_lutris.KZ291758.1                               16325711 10 -  41312741 A-TT---AGAG-GA-A
i Enhydra_lutris.KZ291758.1                              I 3 C 0
s Eptesicus_fuscus.JH977646.1                              2144006 10 -  14770903 A-CT---AGGT-GA-A
i Eptesicus_fuscus.JH977646.1                            I 2 C 0
s Equus_asinus.JREZ01000139.1                              1279691 10 +   4378816 A-TT---AGAG-GA-A
i Equus_asinus.JREZ01000139.1                            I 2 C 0
s Equus_caballus.CM000403.2                               18527512 10 -  39960074 A-TT---AGAG-GA-A
i Equus_caballus.CM000403.2                              I 2 C 0
s Equus_przewalskii.KK951119.1                               29527 10 +    498745 A-TT---AGAG-GA-A
i Equus_przewalskii.KK951119.1                           I 2 C 0
s Erinaceus_europaeus.JH835339.1                           3325281 10 -   7059049 A-TT---AGGG-GA-A
i Erinaceus_europaeus.JH835339.1                         I 2 C 0
s Erythrocebus_patas.Contig38                             21199871 10 -  21539334 G-TT---AGAG-GA-A
i Erythrocebus_patas.Contig38                            I 2 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10796 10 +    133382 A-TT---AGAG-GA-A
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 2 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24733 10 -     44125 A-TT---AGAG-GA-A
i Eubalaena_japonica.EubJap_flattened_line_31514         I 2 C 0
s Felis_catus.AANG03299807.1                                   356 10 -       507 A-TT---TTAA-GC-A
i Felis_catus.AANG03299807.1                             I 3 C 0
s Felis_catus_fca126.CM031415.1                           20191934 10 + 205367284 A-TT---TTAA-GC-A
i Felis_catus_fca126.CM031415.1                          I 3 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  5459 10 -     36744 A-TT---TTAA-GC-A
i Felis_nigripes.FelNig_flattened_line_20823             I 3 C 0
s Fukomys_damarensis.KN121974.1                             848439 10 +   3816255 A-TT---AGAG-GA-A
i Fukomys_damarensis.KN121974.1                          I 2 I 7
s Galagoides_demidoff.k141_31856                              3136 13 -      3432 g-tcctgagag-ga-a
i Galagoides_demidoff.k141_31856                         I 2 I 7
s Galeopterus_variegatus.GalVar_scaffold_56069               25403 10 +     26054 A-TT---AGAG-AA-A
i Galeopterus_variegatus.GalVar_scaffold_56069           I 2 C 0
s Glis_glis.GliGli_scaffold_19807                            30294 10 +     49224 A-TT---AAAG-GA-A
i Glis_glis.GliGli_scaffold_19807                        I 2 I 7
s Gorilla_beringei.k141_3596273                              10500 10 -     32273 A-TT---AGAG-GA-A
i Gorilla_beringei.k141_3596273                          I 140 T 140
s Gorilla_gorilla.LT578341.1                             186332650 10 + 186649187 A-TT---AGAG-GA-A
i Gorilla_gorilla.LT578341.1                             I 140 T 106
s Graphiurus_murinus.GraMur_scaffold_10447                   30022 10 +     78134 A-TT---AAAG-GA-A
i Graphiurus_murinus.GraMur_scaffold_10447               I 2 I 7
s Helogale_parvula.HelPar_flattened_line_2585               238096 10 +    327341 A-TT---ATAG-CA-A
i Helogale_parvula.HelPar_flattened_line_2585            I 3 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17421 10 +     36099 A-TC---AGGG-GA-A
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 2 C 0
s Heterocephalus_glaber.JH602082.1                        20659318 10 +  22651954 A-TT---AGAG-GA-A
i Heterocephalus_glaber.JH602082.1                       I 2 I 7
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 181 10 +       961 A-TA---AGAG-GA-A
i Heterohyrax_brucei.HetBruBak_scaffold_383740           I 2 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111976 10 +    128679 A-TT---AGAG-GA-A
i Hippopotamus_amphibius.HipAmp_scaffold_9076            I 2 I 8
s Hipposideros_armiger.JXIK01000431.1                       108315 10 +   1711038 A-TG---AGG-AGA-A
i Hipposideros_armiger.JXIK01000431.1                    I 2 I 7
s Hipposideros_galeritus.HipGal_scaffold_29171               39756 10 +     43066 A-TG---AGG-AGA-A
i Hipposideros_galeritus.HipGal_scaffold_29171           I 2 I 7
s Hoolock_leuconedys.ctg274                                    429403 10 +    630532 G-TT---AGAG-GA-A
i Hoolock_leuconedys.ctg274                                 C 0 T 204
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40561 10 +     55795 A-TT---ATAA-CA-A
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 3 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19787 10 -    143317 A-TT---TCAG-GA-A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 2 I 7
s Hylobates_agilis.k141_307679                               12323 10 -     15490 G-TT---AGAG-GA-A
i Hylobates_agilis.k141_307679                           I 2 T 206
s Hylobates_klossii.k141_282416                              54328 10 +     67168 G-TT---AGAG-GA-A
i Hylobates_klossii.k141_282416                          I 2 T 206
s Hylobates_pileatus_b.LG02                                     189537775 10 - 191637585 G-TT---AGAG-GA-A
i Hylobates_pileatus_b.LG02                                     T 203 I 205
s Hylobates_pileatus_a.tarseq_633                            3330873 10 -  11177569 G-TT---AGAG-GA-A
i Hylobates_pileatus_a.tarseq_633                          I 2 T 206
s Hystrix_cristata.HysCri_scaffold_5660                      80861 10 +    135385 A-TT---AGAA-GA-A
i Hystrix_cristata.HysCri_scaffold_5660                  I 2 I 7
s Ictidomys_tridecemlineatus.JH393364.1                    7514528 10 -   7955117 A-TT---ATAG-AA-A
i Ictidomys_tridecemlineatus.JH393364.1                  I 2 I 8
s Indri_indri.k141_3655594                                   18105 10 +     31101 G-TT---AGAG-GA-A
i Indri_indri.k141_3655594                               I 2 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22337 10 +     23964 A-TT---AGAG-GA-A
i Inia_geoffrensis.IniGeo_flattened_line_48101           I 2 C 0
s Jaculus_jaculus.JH725527.1                               8271308 10 -   9596543 A-TT---AGAG-AA-A
i Jaculus_jaculus.JH725527.1                             I 2 I 8
s Kogia_breviceps.KogBre_flattened_line_192630                1604 10 -      3359 A-TT---AGAG-GA-A
i Kogia_breviceps.KogBre_flattened_line_192630           I 2 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    12185 10 -     42476 A-CT---AGGT-GA-A
i Lasiurus_borealis.LasBor_scaffold_32767                I 7 I 22
s Lepilemur_ankaranensis.k141_596936                          6739 10 -     23766 G-TT---AGAG-GA-A
i Lepilemur_ankaranensis.k141_596936                     I 2 I 5
s Lepilemur_dorsalis.k141_577674                             24686 10 +     45836 G-TT---AGAG-GA-A
i Lepilemur_dorsalis.k141_577674                         I 2 I 5
s Lepilemur_ruficaudatus.k141_420445                         31597 10 -     32627 G-TT---AGAG-GA-A
i Lepilemur_ruficaudatus.k141_420445                     I 2 I 5
s Lepilemur_septentrionalis.k141_185316                      22741 10 +     54090 G-TT---AGAG-GA-A
i Lepilemur_septentrionalis.k141_185316                  I 2 I 5
s Leptonychotes_weddellii.KB714746.1                       3036044 10 +   3914936 A-TT---AGAG-GA-A
i Leptonychotes_weddellii.KB714746.1                     I 3 C 0
s Lipotes_vexillifer.KE559953.1                             267418  7 -    662738 A-TT---AG----A-A
i Lipotes_vexillifer.KE559953.1                          I 2 C 0
s Lophocebus_aterrimus.ctg367                              1431396 10 +   1826925 G-TT---AGAG-GA-A
i Lophocebus_aterrimus.ctg367                            I 2 C 0
s Loris_lydekkerianus.k141_2539221                             638 10 +     11245 G-TC---AGAG-GA-A
i Loris_lydekkerianus.k141_2539221                       I 2 C 0
s Loris_tardigradus.ctg83                                   999473 11 +   6120653 GTTC---AGAG-GA-A
i Loris_tardigradus.ctg83                                I 2 C 0
s Loxodonta_africana.GL010049.1                            4214454 10 -  43346337 C-CA---AGTG-GA-A
i Loxodonta_africana.GL010049.1                          I 2 C 0
s Lycaon_pictus.CM007581.1                                17951661 10 -  59628241 A-TT---ATAG-GA-A
i Lycaon_pictus.CM007581.1                               I 3 C 0
s Macaca_arctoides.k141_2326796                               1581 10 +     40492 G-TT---AGAG-GA-A
i Macaca_arctoides.k141_2326796                          I 2 C 0
s Macaca_assamensis.Contig5                               59670841 10 +  60120075 G-TT---AGAG-GA-A
i Macaca_assamensis.Contig5                              I 2 C 0
s Macaca_cyclopis.k119_18836                                  7339 10 -     26193 G-TT---AGAG-GA-A
i Macaca_cyclopis.k119_18836                             I 2 C 0
s Macaca_fascicularis.k141_814140                            75133 10 -    114318 G-TT---AGAG-GA-A
i Macaca_fascicularis.k141_814140                        I 2 C 0
s Macaca_fuscata.k119_255327                                   852 10 -     23192 G-TT---AGAG-GA-A
i Macaca_fuscata.k119_255327                             I 2 C 0
s Macaca_leonina.k141_3550399                                10305 10 -     29190 G-TT---AGAG-GA-A
i Macaca_leonina.k141_3550399                            I 2 C 0
s Macaca_maura.k141_2733130                                  18872 10 +     37952 G-TT---AGAG-GA-A
i Macaca_maura.k141_2733130                              I 2 C 0
s Macaca_mulatta.NC_041758.1                             186833960 10 + 187317192 G-TT---AGAG-GA-A
i Macaca_mulatta.NC_041758.1                             I 2 C 0
s Macaca_nemestrina.KQ007038.1                            25452521 10 -  25927173 G-TT---AGAG-GA-A
i Macaca_nemestrina.KQ007038.1                           I 2 C 0
s Macaca_nigra.k141_1655396                                  74721 10 +     89720 G-TT---AGAG-GA-A
i Macaca_nigra.k141_1655396                              I 2 C 0
s Macaca_radiata.k141_3680011                                 1718 10 +     20474 G-TT---AGAG-GA-A
i Macaca_radiata.k141_3680011                            I 2 C 0
s Macaca_siberu.k141_635500                                   1519 10 -     14993 G-TT---AGAG-GA-A
i Macaca_siberu.k141_635500                              I 2 C 0
s Macaca_silenus.Contig273                                  324392 10 -    668171 G-TT---AGAG-GA-A
i Macaca_silenus.Contig273                               I 2 C 0
s Macaca_thibetana.k99_7456                                  15661 10 -     15935 G-TT---AGAG-GA-A
i Macaca_thibetana.k99_7456                              I 2 C 0
s Macaca_tonkeana.k141_1498238                               20458 10 -     45290 G-TT---AGAG-GA-A
i Macaca_tonkeana.k141_1498238                           I 2 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87503  9 +     94391 A-TT---AGG--GA-A
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 2 C 0
s Mandrillus_leucophaeus.scaffold280                      23932013 10 -  24302211 G-TT---AGAG-GA-A
i Mandrillus_leucophaeus.scaffold280                     I 2 C 0
s Mandrillus_sphinx.Contig270                               346191 10 +    752769 G-TT---AGAG-GA-A
i Mandrillus_sphinx.Contig270                            I 2 C 0
s Manis_javanica.JSZB01003497.1                              15548 10 +    737560 A-TT---AGAG-GG-G
i Manis_javanica.JSZB01003497.1                          I 2 I 4
s Manis_pentadactyla.KN006162.1                              46937 10 -    317179 A-TT---AGAG-GG-G
i Manis_pentadactyla.KN006162.1                          I 2 I 4
s Marmota_marmota.CZRN01000018.1                          33097378 10 -  40650429 a-tt---aaag-aa-a
i Marmota_marmota.CZRN01000018.1                         I 2 I 8
s Megaderma_lyra.MegLyr_scaffold_4542                         6734  5 -    207569 A-TT---AG-------
i Megaderma_lyra.MegLyr_scaffold_4542                    I 2 I 5
s Mellivora_capensis.MelCap_flattened_line_69365              6175 10 +     13704 A-TT---AGAG-GA-A
i Mellivora_capensis.MelCap_flattened_line_69365         I 3 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3005 10 +     10310 G-TT---AGAG-GA-A
i Mesoplodon_bidens.MesBid_scaffold_108144               I 2 C 0
s Microcebus_murinus.CM007674.1                           18283265 10 -  93316391 A-TT---AGAG-GA-A
i Microcebus_murinus.CM007674.1                          I 2 I 5
s Micronycteris_hirsuta.MicHir_scaffold_52381                13360 10 -     19307 A-CT---AGGG-GA-A
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 2 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849034 10 +   8254450 A-TT---AGGT-GA-A
i Miniopterus_natalensis.LDJU01000034.1                  I 2 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32910 10 +     64694 A-TT---AGGT-GA-A
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 2 C 0
s Miopithecus_ogouensis.k141_534055                           3748 10 -     28506 G-TT---AAAG-GA-A
i Miopithecus_ogouensis.k141_534055                      I 2 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62374 10 -     63350 A-TT---AGAG-GA-A
i Mirounga_angustirostris.MirAng_flattened_line_22144    I 3 C 0
s Mirza_zaza.k141_952172                                      4620 10 -     37649 G-TT---AGAG-GA-A
i Mirza_zaza.k141_952172                                 I 2 I 5
s Monodon_monoceros.MonMon_M_scaffold_103                    26510 10 -    437263 A-TT---AGAG-GA-A
i Monodon_monoceros.MonMon_M_scaffold_103                I 2 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137766 10 -    366855 A-CG---AGGC-GA-A
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 2 C 0
s Moschus_moschiferus.MosMos_scaffold_61429                  27361 10 -     27816 A-TT---AGAG-GA-A
i Moschus_moschiferus.MosMos_scaffold_61429              I 2 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31297 10 +     37127 A-TT---ATAG-CA-A
i Mungos_mungo.MunMun_flattened_line_23663               I 3 C 0
s Murina_feae.MurFea_scaffold_85699                           5061  9 +     14753 --CT---AGGT-GA-A
i Murina_feae.MurFea_scaffold_85699                      T 58 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2287 10 +     14296 A-TT---AAAG-GA-A
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 2 I 7
s Mustela_putorius.JH418006.1                               297606 10 -  14710649 A-TT---AGAG-GA-A
i Mustela_putorius.JH418006.1                            I 3 C 0
s Myotis_brandtii.KE162005.1                                278241  3 -  10118263 A-CT------------
i Myotis_brandtii.KE162005.1                             I 2 C 0
s Myotis_davidii.KB100139.1                                1585798  3 -   6019432 A-CT------------
i Myotis_davidii.KB100139.1                              I 2 C 0
s Myotis_lucifugus.GL429869.1                              3902007  3 -   4330536 A-CT------------
i Myotis_lucifugus.GL429869.1                            I 2 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32566  3 +     33610 A-CT------------
i Myotis_myotis.MyoMyo_scaffold_28916                    I 2 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186047  9 +    196477 C-TA---AGG--GA-A
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 2 C 0
s Nannospalax_galili.KL204047.1                            2025449 10 -   3037898 A-TT---AGAG-GC-A
i Nannospalax_galili.KL204047.1                          T 59 I 8
s Nasalis_larvatus.k141_413338                                9761 10 +     21681 G-TT---AGAG-GA-A
i Nasalis_larvatus.k141_413338                           I 2 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865466 10 +   7148211 A-TT---AGAG-GA-A
i Neophocaena_asiaeorientalis.KZ687982.1                 I 2 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756330 10 +    783361 A-CT---AGGT-GA-A
i Noctilio_leporinus.NocLep_scaffold_251                 I 2 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145922 10 -   9404916 A-TT---ATAG-GA-A
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 3 C 0
s Nycticebus_bengalensis.LG01                            102574442 10 - 196305487 G-TC---AGAG-GA-A
i Nycticebus_bengalensis.LG01                            I 2 C 0
s Nycticebus_coucang.k141_5327727                             2128 10 +      8486 G-TC---AGAG-GA-A
i Nycticebus_coucang.k141_5327727                        I 2 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744869 10 + 199412804 G-TC---AGAG-GA-A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 2 C 0
s Ochotona_princeps.JH802162.1                             1355702  9 +   3988456 A-TT---TGA--GA-A
i Ochotona_princeps.JH802162.1                           I 2 C 0
s Odobenus_rosmarus.KB229312.1                              500663 10 -   2017862 A-TT---AGAG-GA-A
i Odobenus_rosmarus.KB229312.1                           I 3 C 0
s Odocoileus_virginianus.KZ100018.1                         144594 10 +    630418 A-TT---AGAG-GA-A
i Odocoileus_virginianus.KZ100018.1                      I 2 I 5
s Orcinus_orca.KB316932.1                                  2781381 10 -  10937097 A-TT---AGAG-GA-A
i Orcinus_orca.KB316932.1                                I 2 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6779 10 -     18566 T-TG---AGGG-GA-A
i Orycteropus_afer.OryAfe_flattened_line_144387          I 2 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458676 10 -    559221 A-TT---ATAG-GA-A
i Otocyon_megalotis.JAEUCK010005147.1                    I 3 C 0
s Ovis_aries.CM001607.2                                   17584952 10 +  44047080 A-TC---AGGG-GA-A
i Ovis_aries.CM001607.2                                  I 2 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173373 10 -    191736 A-TC---AGGG-GA-A
i Ovis_canadensis.OviCan_scaffold_2572                   I 2 C 0
s Pan_paniscus.KQ411613.1                                    36144 10 +     80009 G-TT---AGAG-GA-A
i Pan_paniscus.KQ411613.1                                T 2405 I 2336
s Pan_troglodytes.CM009242.2                             189137235 10 + 189151597 g-tt---agag-ga-a
i Pan_troglodytes.CM009242.2                             T 69 n 69
s Panthera_onca.PanOnc_flattened_line_3271                  147081 10 +    230217 A-TT---ATAG-GA-A
i Panthera_onca.PanOnc_flattened_line_3271               I 3 C 0
s Panthera_pardus.KV860321.1                                259790 10 +  18783137 A-TT---ATAG-GA-A
i Panthera_pardus.KV860321.1                             I 3 C 0
s Panthera_tigris.KE722367.1                               4716937 10 -   8748460 A-TT---ATAG-GA-A
i Panthera_tigris.KE722367.1                             I 3 C 0
s Pantholops_hodgsonii.KE114653.1                          1264306 10 -   2937107 A-TT---AGGG-GA-A
i Pantholops_hodgsonii.KE114653.1                        I 2 C 0
s Papio_anubis.CM001495.2                                183437335 10 + 183742232 G-TT---AGAG-GA-A
i Papio_anubis.CM001495.2                                I 2 C 0
s Papio_cynocephalus.k141_4307930                             1400 10 +     20448 G-TT---AGAG-GA-G
i Papio_cynocephalus.k141_4307930                        I 2 I 93
s Papio_hamadryas.Contig39                                20558019 10 +  20919399 G-TT---AGAG-GA-A
i Papio_hamadryas.Contig39                               I 2 I 279
s Papio_kindae.k141_1936966                                    143 10 +     41871 G-TT---AGAG-GA-G
i Papio_kindae.k141_1936966                              I 2 I 93
s Papio_ursinus.k141_3428135                                  3421 10 +      9205 G-TT---AGAG-GA-G
i Papio_ursinus.k141_3428135                             I 2 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8816 10 -     78924 G-TT---ATAG-GA-A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 3 C 0
s Perodicticus_ibeanus.k141_855320                            4619 10 +     13100 G-TC---AGAG-GA-A
i Perodicticus_ibeanus.k141_855320                       I 2 C 0
s Perodicticus_potto.k141_1092580                             2987 10 +     25941 G-TC---AGAG-GA-A
i Perodicticus_potto.k141_1092580                        I 2 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25302 10 +     32600 A-TT---AGAA-AA-A
i Perognathus_longimembris.PerPac_flattened_line_34437   I 2 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25787  9 -     29689 --TT---TGTA-GA-G
i Petromus_typicus.PetTyp_scaffold_42190                 I 2 I 7
s Phocoena_phocoena.PhoPho_flattened_line_24159               8428 10 +     63832 A-TT---AGAG-GA-A
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 2 C 0
s Piliocolobus_badius.k141_1234363                           38277 10 +     62158 G-TT---AGAA-GA-A
i Piliocolobus_badius.k141_1234363                       I 2 C 0
s Piliocolobus_gordonorum.k141_381342                        33004 10 +     89929 G-TT---AGAG-GA-A
i Piliocolobus_gordonorum.k141_381342                    I 2 C 0
s Piliocolobus_kirkii.k141_448987                            34420 10 +     51399 G-TT---AGAG-GA-A
i Piliocolobus_kirkii.k141_448987                        I 2 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290641 10 -  14605196 G-TC---AGAG-GA-A
i Piliocolobus_tephrosceles.PDMG02000141.1               I 2 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              380 10 +     22620 A-CT---AGGT-AA-A
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 2 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34134 10 +     35617 A-TT---AGAG-GA-A
i Platanista_gangetica.PlaMin_flattened_line_32310       I 2 C 0
s Pongo_abelii.CM009266.2                                189125182 10 + 189387572 G-TT---AGAG-GA-A
i Pongo_abelii.CM009266.2                                T 511 I 307
s Pongo_pygmaeus.ctg66                                     9565025 10 +   9816681 G-TT---AGAG-GA-A
i Pongo_pygmaeus.ctg66                                   T 272 I 274
s Presbytis_comata.k141_677006                               67921 10 -     81375 G-TT---AGAG-GA-A
i Presbytis_comata.k141_677006                           I 2 C 0
s Presbytis_mitrata.k141_2342859                              9748 10 +     10147 G-TT---AGAG-GA-A
i Presbytis_mitrata.k141_2342859                         I 2 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9942 10 -     22811 C-TA---AGAG-GA-A
i Procavia_capensis.ProCapCap_scaffold_85530             I 2 C 0
s Propithecus_coquerelli.NW_012148875.1                     986319 10 +   2598838 G-TT---AGAG-GA-A
i Propithecus_coquerelli.NW_012148875.1                  I 2 I 2
s Propithecus_coronatus.k141_347390                          24608 10 +     38485 G-TT---AGAG-GA-A
i Propithecus_coronatus.k141_347390                      I 2 I 2
s Propithecus_diadema.k141_357118                              769 10 +      4256 G-TT---AGAG-GA-A
i Propithecus_diadema.k141_357118                        I 2 I 2
s Propithecus_edwardsi.k141_1176054                          22127 10 +     35766 G-TT---AGAG-GA-A
i Propithecus_edwardsi.k141_1176054                      I 2 I 2
s Propithecus_perrieri.k141_1200571                            310 10 -     24134 G-TT---AGAG-GA-A
i Propithecus_perrieri.k141_1200571                      I 2 I 2
s Propithecus_tattersalli.k141_790011                        24122 10 -     67325 G-TT---AGAG-GA-A
i Propithecus_tattersalli.k141_790011                    I 2 I 2
s Propithecus_verreauxi.k141_956661                            367 10 -      6182 G-TT---AGAG-GA-A
i Propithecus_verreauxi.k141_956661                      I 2 I 2
s Pteronotus_parnellii.KE909381.1                            11148 10 -     21811 G-CT---AGGT-GA-A
i Pteronotus_parnellii.KE909381.1                        I 2 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36617 10 +     42204 A-TT---AGAG-GA-C
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 3 C 0
s Pteropus_alecto.KB030862.1                              22973626  9 +  28871421 A-TT---AGG--GA-A
i Pteropus_alecto.KB030862.1                             I 2 C 0
s Pteropus_vampyrus.KN534172.1                                1563  9 -      8028 A-TT---AGG--GA-A
i Pteropus_vampyrus.KN534172.1                           I 2 C 0
s Puma_concolor.QAVW01001104.1                            20270248 10 -  38429054 A-TT---TTAA-GA-A
i Puma_concolor.QAVW01001104.1                           I 3 C 0
s Pygathrix_cinerea.k141_1153803                              9750 10 -     91421 G-TT---AGAG-GA-A
i Pygathrix_cinerea.k141_1153803                         I 2 C 0
s Pygathrix_nigripes_b.ctg100                                 7603884 10 +   7812017 G-TT---AGAG-GA-A
i Pygathrix_nigripes_b.ctg100                               I 2 C 0
s Pygathrix_nigripes_a.k141_215492                              9723 10 -     72585 G-TT---AGAG-GA-A
i Pygathrix_nigripes_a.k141_215492                         I 2 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4842 10 +     55207 A-TT---AGAG-GA-A
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 2 I 5
s Rhinolophus_sinicus.LVEH01000134.1                        366859 10 -   3329780 A-TG---AGG-ACA-A
i Rhinolophus_sinicus.LVEH01000134.1                     I 2 C 0
s Rhinopithecus_bieti.k119_217274                             1136 10 -     11128 G-TG---AGAG-GA-A
i Rhinopithecus_bieti.k119_217274                        I 2 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230513 10 - 195417433 G-TG---AGAG-GA-A
i Rhinopithecus_roxellana.NC_044550.1                    I 2 C 0
s Rhinopithecus_strykeri.ctg102                            7666221 10 +   7961872 G-TG---AGAG-GA-A
i Rhinopithecus_strykeri.ctg102                          I 2 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84612  9 -     96226 G-TT---AGG--GA-A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 3 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3494 10 +      4321 A-TT---AGGG-GA-A
i Saiga_tatarica.SaiTat_scaffold_373180                  I 2 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151339 10 -    313613 A-TT---GGAG-GA-A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 2 C 0
s Semnopithecus_entellus.k141_11662                          14265 10 -     19888 G-TT---AGAG-GA-A
i Semnopithecus_entellus.k141_11662                      I 2 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21470 10 +     39453 G-TT---AGAG-GA-A
i Semnopithecus_hypoleucos.k141_1615806                  I 2 C 0
s Semnopithecus_johnii.k141_670120                            1994 10 +     27826 G-TT---AGAG-GA-A
i Semnopithecus_johnii.k141_670120                       I 2 C 0
s Semnopithecus_priam.k141_638794                             1516 10 -     19483 G-TT---AGAG-GA-A
i Semnopithecus_priam.k141_638794                        I 2 C 0
s Semnopithecus_schistaceus.k141_1584426                      1578 10 +      7198 G-TT---AGAG-GA-A
i Semnopithecus_schistaceus.k141_1584426                 I 2 C 0
s Semnopithecus_vetulus.k141_1200928                          9838 10 +     15514 G-TT---AGAG-GA-A
i Semnopithecus_vetulus.k141_1200928                     I 2 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187631 10 -    191337 A-TT---AGAG-AA-A
i Solenodon_paradoxus.SolPar_flattened_line_5840         I 2 C 0
s Sorex_araneus.JH798187.1                                13646977  2 -  18376816 G-T-------------
i Sorex_araneus.JH798187.1                               I 2 I 1
s Spermophilus_dauricus.KZ294078.1                         1948170 10 -   3870691 A-TT---ATAG-AA-A
i Spermophilus_dauricus.KZ294078.1                       I 2 I 8
s Spilogale_gracilis.SpiGra_flattened_line_13525             27159 10 +     97271 A-TT---AGAG-GA-A
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 3 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14166 10 -    196729 A-TC---ATAG-CA-A
i Suricata_suricatta.SurSur_flattened_line_6629          I 3 C 0
s Sus_scrofa.CM000828.4                                   62882413 10 -  69701581 A-TT---AGAG-GA-C
i Sus_scrofa.CM000828.4                                  I 2 C 0
s Symphalangus_syndactylus.tarseq_199                      1088021 10 -   1523678 G-TT---AGAG-GA-A
i Symphalangus_syndactylus.tarseq_199                    I 2 T 207
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6764  9 +     41958 --TC---AGGT-GA-A
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 2 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69409  9 +    116680 C-TA---AGG--GA-A
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 2 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115146 10 -    156842 A-TT---AGAG-GA-A
i Tapirus_indicus.TapInd_scaffold_9301                   I 2 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383601 10 +    539355 A-TT---AGAG-GA-A
i Tapirus_terrestris.TapTer_scaffold_755                 I 2 C 0
s Tarsius_lariang.k141_2201908                               10595 10 +     70052 G-TT---AGAG-AA-A
i Tarsius_lariang.k141_2201908                           I 2 C 0
s Tarsius_wallacei.k141_780063                               14900 10 +     25099 G-TT---AGAG-AA-A
i Tarsius_wallacei.k141_780063                           I 2 C 0
s Theropithecus_gelada.CM009954.1                        186422844 10 + 186847797 G-TT---AGAG-GA-A
i Theropithecus_gelada.CM009954.1                        I 2 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103128  9 +    114563 --TT---AGAG-GA-A
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 2 I 7
s Tonatia_saurophila.TonSau_scaffold_294                     78904 10 +    610378 A-CT---AGGG-GA-A
i Tonatia_saurophila.TonSau_scaffold_294                 I 2 C 0
s Trachypithecus_auratus.k141_722599                          5575 10 -     20410 G-TT---AGAG-GA-A
i Trachypithecus_auratus.k141_722599                     I 2 C 0
s Trachypithecus_crepusculus.k141_1194022                     9767 10 +     15221 G-TT---AGAG-GA-A
i Trachypithecus_crepusculus.k141_1194022                I 2 C 0
s Trachypithecus_cristatus.k141_580354                        5675 10 +     19930 G-TT---AGAG-GA-A
i Trachypithecus_cristatus.k141_580354                   I 2 C 0
s Trachypithecus_francoisi.k141_1412647                       2102 10 -     19997 G-TT---AGAG-GA-A
i Trachypithecus_francoisi.k141_1412647                  I 2 C 0
s Trachypithecus_geei.k141_277701                            42221 10 -     60166 G-TT---AGAG-GA-A
i Trachypithecus_geei.k141_277701                        I 2 C 0
s Trachypithecus_germaini.k141_912491                         9693 10 -     27529 G-TT---AGAG-GA-A
i Trachypithecus_germaini.k141_912491                    I 2 C 0
s Trachypithecus_hatinhensis.k141_143409                      9633 10 -     18194 G-TT---AGAG-GA-A
i Trachypithecus_hatinhensis.k141_143409                 I 2 C 0
s Trachypithecus_laotum.k141_907409                           3369 10 -     21137 G-TT---AGAG-GA-A
i Trachypithecus_laotum.k141_907409                      I 2 C 0
s Trachypithecus_leucocephalus.k141_587342                    2071 10 -     10723 G-TT---AGAG-GA-A
i Trachypithecus_leucocephalus.k141_587342               I 2 C 0
s Trachypithecus_melamera.k141_434728                         1224 10 +      9834 G-TT---AGAG-GA-A
i Trachypithecus_melamera.k141_434728                    I 2 C 0
s Trachypithecus_obscurus.k141_190785                        19542 10 +     32220 G-TT---AGAG-GA-A
i Trachypithecus_obscurus.k141_190785                    I 2 C 0
s Trachypithecus_phayrei.ctg124                            5933639 10 +   6242583 G-TT---AGAG-GA-A
i Trachypithecus_phayrei.ctg124                          I 2 C 0
s Trachypithecus_pileatus.k141_2007326                        2884 10 +     20839 G-TT---AGAG-GA-A
i Trachypithecus_pileatus.k141_2007326                   I 2 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    620 10 -      1748 A-TT---AGAG-GA-A
i Tragulus_javanicus.TraJav_scaffold_140459              I 2 I 2
s Tupaia_chinensis.KB320699.1                              2149558 10 +   4065304 N-NN---AGAG-GA-A
i Tupaia_chinensis.KB320699.1                            I 29 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     3150 10 -     10553 A-GC---AGAG-GA-A
i Tupaia_tana.TupTan_flattened_line_97126                I 2 I 9
s Tursiops_truncatus.MRVK01000835.1                       15737628 10 +  33153633 A-TT---AGAG-GA-A
i Tursiops_truncatus.MRVK01000835.1                      I 2 C 0
s Uropsilus_gracilis.UroGra_scaffold_97021                    1859 10 -      4736 A-TT---GGAG-GA-A
i Uropsilus_gracilis.UroGra_scaffold_97021               I 2 C 0
s Ursus_maritimus.KK499267.1                               4846860 10 -   5085361 G-TT---AGAG-GA-A
i Ursus_maritimus.KK499267.1                             I 3 C 0
s Vicugna_pacos.KN270157.1                                 5368332 10 -   5488506 C-TT---AGAG-GA-A
i Vicugna_pacos.KN270157.1                               I 2 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7337 10 -     43706 A-TT---ATAG-GA-A
i Vulpes_lagopus.VulLag_flattened_line_30954             I 3 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19665 10 -     24430 A-TT---AAAG-GA-A
i Xerus_inauris.XerIna_scaffold_48378                    I 2 I 8
s Zalophus_californianus.ZalCal_flattened_line_63728          1785 10 +      2932 A-TT---AGAG-GA-A
i Zalophus_californianus.ZalCal_flattened_line_63728     I 3 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9942 10 +     63895 A-TT---AGAG-AA-A
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 2 I 8
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11320 10 +     12536 A-TT---AGAG-GA-A
i Ziphius_cavirostris.ZipCav_flattened_line_71469        I 2 I 8
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   1853 47 +      8208 T
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Papio_papio.k141_802527                                     3586 54 +     27711 T
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    15418  9 -    145209 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            4795 47 -      6351 T
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1069 16 +     62944 CTCT--A---------------------------TAAA-TG---A---------ATCA
s Acinonyx_jubatus.LLWD01001279.1                           823244 22 -   1699592 CTCT--A---------------------------CTAA-TT---ATG-CT-GA-ATCG
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506935 22 -  29979442 CTCT--A---------------------------CAAG-TT---ATG-CT-Ga-atag
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             75159 22 -    347723 CTCT--A---------------------------CAAA-TT---ATG-CT-GA-ATAG
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64946 14 -     89534 -------------------------------------A-TG---ATG-CC-AA-ATTG
i Allactaga_bullata.AllBul_scaffold_9566                 I 8 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9265 16 -     52922 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9192 16 -     28001 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9318 16 -      9772 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            475 16 -     12518 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675109 22 -   2318259 CTCT--A---------------------------CAAC-TC---ACA-CT-GA-ATCA
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183058 22 +    412891 CTCC--A---------------------------TCAA-TG---ACA-CA-GC-ATCA
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97561 22 -    100397 CCCT--A---------------------------TAAC-TC---ACA-CT-GA-ATCA
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7226 14 +     20879 -------------------------------------A-TG---ATG-CT-CA-ATTG
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 8 C 0
s Arctocebus_calabarensis.k141_288239                        14396 22 +     17124 CTCT--G---------------------------TCAA-TG---CTG-TT-GA-ATAG
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2410 22 +     43469 CTCC--G---------------------------TCAA-TT---ACA-CA-GC-ATCA
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  49260 17 -     92717 ----------------------------------TAAA-TG---GTA-CT-GG-ATCG
i Avahi_laniger.k141_765380                              I 2 C 0
s Avahi_peyrierasi.k141_1424874                              49885 17 +     85213 ----------------------------------TAAA-TG---GTA-CT-GG-ATCG
i Avahi_peyrierasi.k141_1424874                          I 2 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191494 22 +  23207421 CTCT--A---------------------------TAAA-TT---ACA-CT-GA-ATCA
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         1960 22 -     18090 CTCT--A---------------------------TAAA-TT---ACA-CT-GA-ATCA
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26031 22 +     34529 CTCT--A---------------------------CAAC-TC---ACA-CT-GA-ATCA
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    199070 22 -    288883 CTCT--A---------------------------TAAC-TC---ACA-CT-GA-ATCA
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20272275 22 +  48749331 CTCT--A---------------------------TAAC-TC---ACA-CT-GA-NTCA
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1124835 22 -   1948126 CTCT--A---------------------------TAAC-TC---ACA-CT-GA-ATCA
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18082913 22 +  45695690 CTCT--A---------------------------TAAC-TC---ACA-CT-GA-ATCA
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2818402 22 +   4408762 CTCT--A---------------------------TAAC-TC---ACA-CT-GA-ATCA
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998853 22 -  17673402 CTCC--G---------------------------TAAC-TT---ATG-CC-AA-ATCA
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331317 22 -   7040546 CTCC--G---------------------------TAAC-TT---ATG-CC-AA-ATCA
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399593 22 -   1652518 CTCC--G---------------------------TAAC-TT---ATG-CC-AA-ATCA
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795723 22 -  60362399 CTCT--A---------------------------CAAA-TT---ATG-CT-CA-ATTG
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181780 22 -    185531 CTCT--A---------------------------CAAA-TT---ATG-CT-CA-ATTG
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031167 22 -   9314153 CTCT--A---------------------------CAAA-TT---ATG-CT-CA-ATTG
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955431 22 -  59632846 CTCT--A---------------------------CAAA-TT---ATG-CT-CA-ATTG
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496732 22 +  63665305 CTCT--A---------------------------CAAA-TT---ATG-CT-CA-ATTG
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18829227 22 +  46296322 CTCT--A---------------------------CAAC-TC---ACA-CT-GA-GCCA
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18059947 22 -  44709034 CTCT--A---------------------------CAAC-TC---ACA-CT-GA-GCCA
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           140990 22 -    496798 ttca--a---------------------------caaa-tg---atg-cc-ga-atgg
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2828 22 -     11696 CTCC--A---------------------------TCAA-TT---ACA-CA-GC-ATCA
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133602 14 +    179628 -------------------------------------A-CA---ATG-CT-GA-GTTG
i Castor_canadensis.CasCan_scaffold_2074                 I 6 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89160 22 +    217609 ATCT--A---------------------------TAAA-TT---ACA-CT-GG-AATG
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 41
s Cavia_aperea.AVPZ01000300.1                             18347422 14 -  23392119 -------------------------------------AATT---A-G-CT-AA-CTTG
i Cavia_aperea.AVPZ01000300.1                            I 7 C 0
s Cavia_porcellus.DS562891.1                              18359682 14 -  23407841 -------------------------------------AATT---A-G-CT-AA-CTTG
i Cavia_porcellus.DS562891.1                             I 7 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98557 14 +    143979 -------------------------------------AATT---A-G-CT-AA-CTTG
i Cavia_tschudii.CavTsc_scaffold_8919                    I 7 C 0
s Cephalopachus_bancanus.k141_2037105                         4906 22 -      8605 TTCA--A---------------------------CAAA-TG---ATG-CC-GA-ATGG
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227826 22 +  27778364 CTCT--A---------------------------TAAA-TT---ACA-CC-GA-atca
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2544 22 -      3715 CTCT--A---------------------------TAAA-TT---ACA-CC-GA-ATCA
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470236 16 +   4669795 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8785 16 -     19203 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3204 16 +      8260 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3434 16 +     27781 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3580 16 -     20310 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6564 16 +     29689 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             917 16 +      9989 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9252 16 -     27936 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9271 16 -     11289 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811647 16 +  39242232 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217338 16 -  21565898 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34458 16 -     53127 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1750 16 +      7159 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9263 16 -     27947 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9239 16 +     17596 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39733 16 -     41420 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4748 22 -      6351 CGTG--G---------------------------CAAA-TG---ATG-CT-GA-ATCA
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       T 47 C 0
s Cheirogaleus_major.k141_333249                             16679 16 -     52598 ----------------------------------TAAA-TG---GTG-CT-GA-ACT-
i Cheirogaleus_major.k141_333249                         I 2 C 0
s Cheirogaleus_medius.k141_1055463                           12028 16 +     57038 ----------------------------------TAAA-TG---GTG-CT-GA-ACT-
i Cheirogaleus_medius.k141_1055463                       I 2 C 0
s Chinchilla_lanigera.JH722012.1                           1248454 15 +   2543920 -------------------------------------AGTG---ATG-CT-AA-ATTG
i Chinchilla_lanigera.JH722012.1                         I 7 C 0
s Chlorocebus_aethiops.ctg25                              18423202 16 -  18827391 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9645 16 -     50209 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416650 16 + 135778131 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15105 22 +     19366 CTTG--A---------------------------TAAA-TG---ATG-CT-GA-ATCA
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170204 22 +    839153 CTTG--A---------------------------TAAA-TG---ATG-CT-GA-atca
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1905179 16 +   2368649 CTGT--A---------------------------TAGA-TG---A---------ATCG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944824 43 + 200372422 CTGT--ATACACCTGCTGTGTTAGAGGAACTGTACAGA-TG---A---------ATCG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31718 16 +     84244 CTGT--A---------------------------TAGA-TG---A---------ATCG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545935 22 -  53390261 CTTT--A---------------------------GGAA-TT---ATG-CT-GC-ATCA
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10447 22 -     20389 CTCT--A---------------------------TGAA-TT---AAG-CA-GA-ATCA
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_287352               333  9 +      4208 CTCCTTG---------------------------TA----------------------
i Crocidura_indochinensis.CroInd_scaffold_287352         I 1 I 18
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24189 22 -     87169 TTCT--A---------------------------CTAA-TT---ATG-CT-GA-ATCG
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2806 15 +      5455 -------------------------------------AATG---ATG-CT-AA-ATTG
i Cuniculus_paca.CunPac_flattened_line_231100            I 7 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1189 15 +      3576 -------------------------------------AATG---ATG-CT-AA-ATTG
i Dasyprocta_punctata.DasPun_flattened_line_206793       I 7 C 0
s Dasypus_novemcinctus.JH564415.1                            61018 22 +   2246927 TGTG--A---------------------------TAAA-TG---ATG-CC-GA-atca
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532843 22 -  12879189 CTCT--G---------------------------TAAA-TG---GTG-TT-GA-ACTG
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811130 22 +  35494412 CTCT--A---------------------------TAAA-TT---ACG-CC-GA-ATCA
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8627859 22 +  20541912 CTCC--A---------------------------TTAA-TT---A-GACA-GC-ATCA
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669359 22 +   1390856 CTCT--A---------------------------TAAA-TT---ACA-CT-GA-ATCG
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2434 22 +    198055 ATCT--A---------------------------TAAA-TT---ACA-CC-GA-ATCA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34232 15 +     67921 -------------------------------------AGTG---ATG-CT-AA-ATTG
i Dinomys_branickii.DinBra_scaffold_21862                I 7 C 0
s Dipodomys_ordii.KN672350.1                              18895763 14 +  37912305 -------------------------------------a-tg---ttt-ct-cC-ATTG
i Dipodomys_ordii.KN672350.1                             I 8 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  11973 14 +     14536 -------------------------------------A-TG---TTT-CT-TC-ATTG
i Dipodomys_stephensi.DipSte_scaffold_75855              I 8 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31446 15 -     42551 -------------------------------------ACCT---ATG-CT-AA-ATTG
i Dolichotis_patagonum.DolPat_scaffold_30833             I 7 C 0
s Eidolon_helvum.KE759718.1                                   7366 21 +     11740 CTCT--A---------------------------TAAA-TT---A-C-CA-GA-AGCA
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310231 22 +    607251 CTCT--A---------------------------TAAC-TC---ACA-CT-GA-ATCA
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1088954 22 +  10337057 CTCG--A---------------------------TAAA-TG---GTA-CT-GA-AGTG
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16325721 22 -  41312741 CTCT--A---------------------------CAAA-TT---ATG-CT-CA-GTCG
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144016 22 -  14770903 ATCT--A---------------------------TAAA-TT---ACA-CA-GA-ATCA
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279701 22 +   4378816 CTCT--A---------------------------CAAA-TT---ACA-CT-GA-ATCA
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527522 22 -  39960074 CTCT--A---------------------------CAAA-TT---ACA-CT-GA-ATCA
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29537 22 +    498745 CTCT--A---------------------------CAAA-TT---ACA-CT-GA-ATCA
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3325291 22 -   7059049 TGT-T-A---------------------------CAAA-TT---ATG-CT-GA-ATAA
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21199881 16 -  21539334 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10806 22 +    133382 CTCT--A---------------------------TAAA-TT---ACA-CT-GA-ATCA
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24743 22 -     44125 CTCT--A---------------------------TAAA-TT---ACA-CT-GA-ATCA
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.AANG03299807.1                                   366 22 -       507 CTCT--A---------------------------CTAA-TT---ATG-CT-GA-ATCG
i Felis_catus.AANG03299807.1                             C 0 C 0
s Felis_catus_fca126.CM031415.1                           20191944 22 + 205367284 CTCT--A---------------------------CTAA-TT---ATG-CT-GA-ATCG
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  5469 22 -     36744 CTCT--A---------------------------CTAA-TT---ATG-CT-GA-ATCA
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             848456 15 +   3816255 -------------------------------------AGTG---ATG-CT-GG-ATTG
i Fukomys_damarensis.KN121974.1                          I 7 C 0
s Galagoides_demidoff.k141_31856                              3156 25 -      3432 cact--t---------------------------taga-tgcctata-tt-ca-aaaa
i Galagoides_demidoff.k141_31856                         I 7 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25413 22 +     26054 CTCT--G---------------------------TGAA-TG---ATG-CT-GA-ACTG
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30311 14 +     49224 -------------------------------------A-TG---ATG-CT-GA-ATTT
i Glis_glis.GliGli_scaffold_19807                        I 7 C 0
s Gorilla_beringei.k141_3596273                              10370 10 -     32273 CTCT--A---------------------------TAAA-T------------------
i Gorilla_beringei.k141_3596273                          T 140 I 24
s Gorilla_gorilla.CYUI03001814.1                             26635 16 -     31004 ctct--a---------------------------taaa-tg---a---------atca
i Gorilla_gorilla.CYUI03001814.1                         T 390 T 235
s Graphiurus_murinus.GraMur_scaffold_10447                   30039 14 +     78134 -------------------------------------A-TG---ATG-CT-CA-ATTG
i Graphiurus_murinus.GraMur_scaffold_10447               I 7 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238106 22 +    327341 CTCT--G---------------------------TTAA-TT---ATG-CT-GA-ATCG
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17431 22 +     36099 CTCT--A---------------------------CAAC-TC---ACA-CT-GA-ACCA
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20659335 15 +  22651954 -------------------------------------AGTG---ATG-CT-GA-CTTG
i Heterocephalus_glaber.JH602082.1                       I 7 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 191 22 +       961 CTCT--G---------------------------TGAA-GG---A-C-CTTGC-ATTG
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111994 14 +    128679 -------------------------------------A-TT---ACG-CT-GA-ATCG
i Hippopotamus_amphibius.HipAmp_scaffold_9076            I 8 C 0
s Hipposideros_armiger.JXIK01000431.1                       108332 14 +   1711038 -------------------------------------A-TT---ATG-CA-GA-ATCA
i Hipposideros_armiger.JXIK01000431.1                    I 7 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39773 14 +     43066 -------------------------------------A-TT---ATG-CA-GA-ATCA
i Hipposideros_galeritus.HipGal_scaffold_29171           I 7 C 0
s Hoolock_leuconedys.ctg274                                    429209 10 +    630532 CTCT--A---------------------------CAAA-T------------------
i Hoolock_leuconedys.ctg274                                 T 204 I 209
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40571 22 +     55795 CTCT--A---------------------------CTAA-TT---ATG-CT-GA-ATTG
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19804 15 -    143317 -------------------------------------AACT---CTG-CT-AA-ATTG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 7 C 0
s Hylobates_agilis.k141_307679                               12127 10 -     15490 CTCT--A---------------------------CAAA-T------------------
i Hylobates_agilis.k141_307679                           T 206 I 211
s Hylobates_klossii.k141_282416                              54132 10 +     67168 CTCT--A---------------------------CAAA-T------------------
i Hylobates_klossii.k141_282416                          T 206 I 211
s Hylobates_pileatus_b.LG02                                     189537990  9 - 191637585 CTCT--A---------------------------TAAT--------------------
i Hylobates_pileatus_b.LG02                                     I 205 I 6
s Hylobates_pileatus_a.tarseq_633                            3330677 10 -  11177569 CTCT--A---------------------------CAAA-T------------------
i Hylobates_pileatus_a.tarseq_633                          T 206 I 211
s Hystrix_cristata.HysCri_scaffold_5660                      80878 15 +    135385 -------------------------------------AATA---ATG-CT-GC-ATTG
i Hystrix_cristata.HysCri_scaffold_5660                  I 7 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514546 14 -   7955117 -------------------------------------A-TG---ATG-CT-GA-ATTg
i Ictidomys_tridecemlineatus.JH393364.1                  I 8 C 0
s Indri_indri.k141_3655594                                   18115 22 +     31101 CTCT--G---------------------------TAAA-TG---GTG-CT-GG-ATTG
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22347 22 +     23964 CTCT--A---------------------------TAAA-TT---ACG-CT-GA-ATCA
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271326 14 -   9596543 -------------------------------------A-TG---ATG-CC-AA-ATTG
i Jaculus_jaculus.JH725527.1                             I 8 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1614 22 -      3359 CTCT--A---------------------------TAAA-TT---ACG-CT-GA-ATCA
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_50988                    11881 22 +     29960 TTCT--A---------------------------TAAA-TG---ACA-CA-GA-ATCA
i Lasiurus_borealis.LasBor_scaffold_50988                T 22 T 40
s Lepilemur_ankaranensis.k141_596936                          6754 17 -     23766 ----------------------------------TAAA-TG---GTG-CT-GA-ATTG
i Lepilemur_ankaranensis.k141_596936                     I 5 C 0
s Lepilemur_dorsalis.k141_577674                             24701 17 +     45836 ----------------------------------TAAA-TG---GTG-CT-GA-ATTG
i Lepilemur_dorsalis.k141_577674                         I 5 C 0
s Lepilemur_ruficaudatus.k141_420445                         31612 17 -     32627 ----------------------------------TAAA-TG---GTG-CT-GA-ATTG
i Lepilemur_ruficaudatus.k141_420445                     I 5 C 0
s Lepilemur_septentrionalis.k141_185316                      22756 17 +     54090 ----------------------------------TAAA-TG---GTG-CT-GA-ATTG
i Lepilemur_septentrionalis.k141_185316                  I 5 C 0
s Leptonychotes_weddellii.KB714746.1                       3036054 22 +   3914936 CTCT--A---------------------------CAAA-TT---ATG-CT-ga-attg
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             267425 22 -    662738 CTCT--A---------------------------TAAA-TT---ATG-CC-GA-ATCA
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1431406 16 +   1826925 CTGT--A---------------------------CAGA-TG---A---------ATCA
i Lophocebus_aterrimus.ctg367                            C 0 I 373
s Loris_lydekkerianus.k141_2539221                             648 20 +     11245 CTCT--G---------------------------TCAA-TG---GTG-TT-GA-AT--
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999484 20 +   6120653 CTCT--G---------------------------TCAA-TG---GTG-TT-GA-AT--
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214464 22 -  43346337 CTCT--G---------------------------TAAA-GG---ACA-CT--ACATTG
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951671 22 -  59628241 CTCT--A---------------------------CAAA-TT---ATG-CT-CA-ATTG
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               1591 16 +     40492 CTGT--G---------------------------TAGA-TG---A---------ATCA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670851 16 +  60120075 CTGT--G---------------------------TAGA-CG---A---------ATCA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7349 16 -     26193 CTGT--G---------------------------TAGA-TG---A---------ATCA
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75143 16 -    114318 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   862 16 -     23192 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10315 16 -     29190 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18882 16 +     37952 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833970 16 + 187317192 CTGT--G---------------------------TAGA-CG---A---------ATCA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452531 16 -  25927173 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74731 16 +     89720 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1728 16 +     20474 CTGT--G---------------------------TAGA-CG---A---------ATCA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1529 16 -     14993 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324402 16 -    668171 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15671 16 -     15935 CTGT--G---------------------------TAGA-CG---A---------ATCA
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20468 16 -     45290 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87512 21 +     94391 CTCT--A---------------------------TAAA-TT---A---CTAGA-AGCA
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23932023 16 -  24302211 CTGT--A---------------------------CAGA-TG---A---------ATCA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346201 16 +    752769 CTGT--A---------------------------CAGA-TG---A---------ATCA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15562 16 +    737560 -----------------------------------AAA-AT---ATG-Ct-ga-attg
i Manis_javanica.JSZB01003497.1                          I 4 C 0
s Manis_pentadactyla.KN006162.1                              46951 16 -    317179 -----------------------------------AAA-CT---ATG-CT-ga-attg
i Manis_pentadactyla.KN006162.1                          I 4 C 0
s Marmota_marmota.CZRN01000018.1                          33097396 14 -  40650429 -------------------------------------a-TG---ATG-CT-GA-atta
i Marmota_marmota.CZRN01000018.1                         I 8 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6744  4 -    207569 ------------------------------------------------------ATCA
i Megaderma_lyra.MegLyr_scaffold_4542                    I 5 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6185 22 +     13704 CTCT--A---------------------------CAAA-TT---ATG-CT-GA-TTCA
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3015 22 +     10310 CTCT--A---------------------------TAAA-TT---ATG-CC-GA-ATCA
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18283280 17 -  93316391 ----------------------------------TACA-TG---GTG-CT-GA-ATTG
i Microcebus_murinus.CM007674.1                          I 5 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13370 22 -     19307 CTCC--A---------------------------TCAA-TC---ACA-CA-GC-ATCA
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849044 22 +   8254450 CTCT--A---------------------------TAAG-CT---ACa-ca-ga-atca
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32920 22 +     64694 CTCT--T---------------------------TAAG-CT---ACA-CA-GA-ATCA
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3758 16 -     28506 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62384 22 -     63350 CTCT--A---------------------------CAAA-TT---ATG-CT-GA-ATTG
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      4635 17 -     37649 ----------------------------------TACA-TG---GTG-CT-GA-ATTG
i Mirza_zaza.k141_952172                                 I 5 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26520 22 -    437263 CTCT--A---------------------------TAAA-TT---ACG-CC-GA-ATCA
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137776 22 -    366855 CTCC--A---------------------------TCAA-TT---ATA-CA-GC-ATCA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_61429                  27371 22 -     27816 CTCT--A---------------------------TAAC-TC---ACA-CT-GA-ATCA
i Moschus_moschiferus.MosMos_scaffold_61429              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31307 22 +     37127 CTCT--A---------------------------CTAA-TT---ATG-CT-GA-ATCG
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5070 22 +     14753 ATCT--A---------------------------TAAA-CT---ACA-CA-GA-ATCA
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2304 14 +     14296 -------------------------------------A-TG---GTG-CT-GA-ATTT
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 7 C 0
s Mustela_putorius.JH418006.1                               297616 22 -  14710649 CTCT--A---------------------------CAAA-TT---ATG-CT-GA-ATCG
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                278244 18 -  10118263 ------A---------------------------TAAA-TT---ACA-CA-GA-ATCA
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585801 18 -   6019432 ------A---------------------------TAAA-TT---ATA-CA-GA-ATCA
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902010 18 -   4330536 ------A---------------------------TAAA-TT---ACA-CA-GA-ATCA
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32569 18 +     33610 ------A---------------------------TAAA-TT---ACA-CA-GA-ATCA
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186056 22 +    196477 CATG--A---------------------------TAAT-TG---ATA-CT-GG-ATCA
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025467 14 -   3037898 -------------------------------------A-TG---ATG-CT-GA-ATTG
i Nannospalax_galili.KL204047.1                          I 8 C 0
s Nasalis_larvatus.k141_413338                                9771 16 +     21681 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865476 22 +   7148211 CTCT--A---------------------------TAAA-TT---ACG-CC-GA-ATCA
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756340 22 +    783361 CTCC--A---------------------------TAAC-TT---ACA-CA-CC-AGCA
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145932 22 -   9404916 CTCT--A---------------------------CAAA-TT---ATG-CT-CA-ATCG
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102574452 20 - 196305487 CTCT--G---------------------------TCAA-TG---GTG-TT-GA-AT--
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2138 20 +      8486 CTCT--G---------------------------TCAA-TG---GTG-TT-GA-AT--
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744879 20 + 199412804 CTCT--G---------------------------TCAA-TG---GTG-TT-GA-AT--
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355711 22 +   3988456 CACA--T---------------------------TAAA-AG---ATG-CT-GA-TGTA
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              500673 22 -   2017862 CTCT--A---------------------------CAAA-AA---ATG-Ct-ga-atca
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         144609 16 +    630418 -----------------------------------AAC-TC---ACA-CT-GA-ATCA
i Odocoileus_virginianus.KZ100018.1                      I 5 C 0
s Orcinus_orca.KB316932.1                                  2781391 22 -  10937097 CTCT--A---------------------------TAAA-TT---ACG-CC-AA-ATCA
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6789 22 -     18566 CTCT--A---------------------------TAAA-TG---ATA-TT-GA-AATG
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458686 22 -    559221 CTCT--A---------------------------CAAA-TT---ATG-CT-CA-ATTG
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17584962 22 +  44047080 CTCT--A---------------------------CAAC-TC---ACA-CT-GA-ACCA
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173383 22 -    191736 CTCT--A---------------------------CAAC-TC---ACA-CT-GA-ACCA
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    38490  8 +     80009 ctct--a---------------------------taa---------------------
i Pan_paniscus.KQ411613.1                                I 2336 T 2328
s Pan_troglodytes.KZ622849.1                                 16598 16 +    110857 ctct--a---------------------------taaa-tg---a---------atca
i Pan_troglodytes.KZ622849.1                             n 69 I 611
s Panthera_onca.PanOnc_flattened_line_3271                  147091 22 +    230217 CTCT--A---------------------------CTAA-TT---ATG-CT-GT-ATCG
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                259800 22 +  18783137 CTCT--A---------------------------CTAA-TT---ATG-CT-GT-ATCG
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4716947 22 -   8748460 CTCT--A---------------------------CTAA-TT---ATG-CT-GT-ATCG
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1264316 22 -   2937107 CTCT--A---------------------------CAAC-TC---ACA-CT-GA-ATCA
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183437345 16 + 183742232 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1503 16 +     20448 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Papio_cynocephalus.k141_4307930                        I 93 C 0
s Papio_hamadryas.Contig39                                20558308 16 +  20919399 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Papio_hamadryas.Contig39                               I 279 T 279
s Papio_kindae.k141_1936966                                    246 16 +     41871 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Papio_kindae.k141_1936966                              I 93 C 0
s Papio_papio.k141_802527                                     3532 16 +     27711 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Papio_papio.k141_802527                                T 54 C 0
s Papio_ursinus.k141_3428135                                  3431 16 +      9205 CTGT--G---------------------------TAGG-TG---A---------ATCA
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8826 22 -     78924 TTCT--A---------------------------CCAA-TT---ATG-CT-GA-ATCG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            4629 22 +     13100 CTCT--G---------------------------TCAA-TG---CTG-TT-GA-ATCG
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             2997 22 +     25941 CTCT--G---------------------------TCAA-TG---CTG-TT-GA-ATCG
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25803 15 -     29689 -------------------------------------AATA---ATG-CT-GA-ACTG
i Petromus_typicus.PetTyp_scaffold_42190                 I 7 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25312  4 +     32600 TGCT------------------------------------------------------
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 T 22
s Phocoena_phocoena.PhoPho_flattened_line_24159               8438 22 +     63832 CTCT--A---------------------------TAAA-TT---ACG-CC-GA-ATCA
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38287 16 +     62158 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33014 16 +     89929 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34430 16 +     51399 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290651 16 -  14605196 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              390 22 +     22620 ATCT--A---------------------------TAAA-TT---ACA-CA-GA-ATCC
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34144 22 +     35617 CTCT--A---------------------------TAAG-TT---ATG-CT-GA-ATCA
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189125499 16 + 189387572 CTCT--A---------------------------TAAA-TG---A---------ATCA
i Pongo_abelii.CM009266.2                                I 307 C 0
s Pongo_pygmaeus.ctg66                                     9565309  9 +   9816681 CTCT--A---------------------------TAAG--------------------
i Pongo_pygmaeus.ctg66                                   I 274 T 267
s Presbytis_comata.k141_677006                               67931 16 -     81375 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9758 16 +     10147 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9952 22 -     22811 CTCT--G---------------------------TGAA-GG---A-C-CT-TACATTG
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986331 17 +   2598838 ----------------------------------TAAA-TA---GTG-CT-GG-ATTG
i Propithecus_coquerelli.NW_012148875.1                  I 2 C 0
s Propithecus_coronatus.k141_347390                          24620 17 +     38485 ----------------------------------TAAA-TG---GTG-CT-GG-ATTG
i Propithecus_coronatus.k141_347390                      I 2 C 0
s Propithecus_diadema.k141_357118                              781 17 +      4256 ----------------------------------TAAA-TG---GTG-CT-GG-ATTG
i Propithecus_diadema.k141_357118                        I 2 C 0
s Propithecus_edwardsi.k141_1176054                          22139 17 +     35766 ----------------------------------TAAA-TG---GTG-CT-GG-ATTG
i Propithecus_edwardsi.k141_1176054                      I 2 C 0
s Propithecus_perrieri.k141_1200571                            322 17 -     24134 ----------------------------------TAAA-TG---GTG-CT-GG-ATTG
i Propithecus_perrieri.k141_1200571                      I 2 C 0
s Propithecus_tattersalli.k141_790011                        24134 17 -     67325 ----------------------------------TAAA-TG---GTG-CT-GG-ATTG
i Propithecus_tattersalli.k141_790011                    I 2 C 0
s Propithecus_verreauxi.k141_956661                            379 17 -      6182 ----------------------------------TAAA-TG---GTG-CT-GG-ATTG
i Propithecus_verreauxi.k141_956661                      I 2 C 0
s Pteronotus_parnellii.KE909381.1                            11158 22 -     21811 CTCC--A---------------------------TCAA-TT---ACA-CA-GC-ATCA
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36627 22 +     42204 CTCC--A---------------------------CAAA-TT---ATG-CT-GA-ATCG
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973635 21 +  28871421 CTCT--A---------------------------TAAA-TT---A-C-CA-GA-AGCT
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1572 21 -      8028 CTCT--A---------------------------TAAA-TT---A-C-CA-GA-AGCT
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20270258 22 -  38429054 CTCT--A---------------------------CTAA-TT---ATG-CT-GA-ATTG
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                              9760 16 -     91421 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603894 16 +   7812017 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9733 16 -     72585 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4857 16 +     55207 -----------------------------------AAC-TC---ACA-CT-GA-ATCA
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 5 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        366869 22 -   3329780 CTCT--A---------------------------CAAA-TT---ACa-ca-ga-atca
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             1146 16 -     11128 CTGT--A---------------------------TAGA-TG---G---------ATCA
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230523 16 - 195417433 CTGT--A---------------------------TAGA-TG---G---------ATCA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7666231 16 +   7961872 CTGT--A---------------------------TAGA-TG---G---------ATCA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84621 21 -     96226 CTCT--A---------------------------TAAA-TT---A-C-CA-GA-AGCA
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3504 22 +      4321 CTCT--A---------------------------CAAC-TC---ACA-CT-GA-ATCA
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151349 10 -    313613 CTCT--A---------------------------GAAA-T------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          14275 16 -     19888 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21480 16 +     39453 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2004 16 +     27826 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1526 16 -     19483 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1588 16 +      7198 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9848 16 +     15514 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187641 22 -    191337 CTCC--A---------------------------TAAA-GT---ATG-CT-GA-ATAG
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13646980 14 -  18376816 AACCTCA---------------------------TACA-TT---A-------------
i Sorex_araneus.JH798187.1                               I 1 I 3
s Spermophilus_dauricus.KZ294078.1                         1948188 14 -   3870691 -------------------------------------A-TG---ATG-CT-ga-atga
i Spermophilus_dauricus.KZ294078.1                       I 8 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27169 22 +     97271 CTCT--A---------------------------CGAA-TT---ATG-CT-GA-ACCG
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14176 22 -    196729 CTCT--A---------------------------CTAA-TT---ACG-CT-GA-GTCA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   62882423  7 -  69701581 GTCT--A---------------------------CA----------------------
i Sus_scrofa.CM000828.4                                  C 0 I 2
s Symphalangus_syndactylus.tarseq_199                      1087824 10 -   1523678 CTCT--A---------------------------CAAA-T------------------
i Symphalangus_syndactylus.tarseq_199                    T 207 I 212
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6773 22 +     41958 CTCT--A---------------------------TAAA-TT---ACG-C--AACATCA
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69418 22 +    116680 CATG--A---------------------------TAAT-TG---ATA-CT-GG-ATCA
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115156 22 -    156842 CTCT--A---------------------------TGAA-TT---ACA-CT-GA-ATCA
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383611 22 +    539355 CTCT--A---------------------------TAAA-TT---ACA-CT-GA-ATCA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10605 22 +     70052 TTCA--A---------------------------CAAA-TG---ATG-CC-GA-ATGG
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               14910 22 +     25099 TTCA--A---------------------------CAAA-TG---ATG-CC-GA-ATGG
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422854 16 + 186847797 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103144 15 +    114563 -------------------------------------AATA---ATA-CT-CA-ACTG
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 7 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   1806 22 +      8208 CATG--G---------------------------TAAA-CG---ATG-CT-GA-ATCA
i Tolypeutes_matacus.TolMat_scaffold_228639              T 47 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78914 22 +    610378 CTCC--A---------------------------TCAA-TT---ACA-CA-GC-ATCA
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          5585 16 -     20410 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9777 16 +     15221 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5685 16 +     19930 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2112 16 -     19997 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42231 16 -     60166 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9703 16 -     27529 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9643 16 -     18194 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3379 16 -     21137 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2081 16 -     10723 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1234 16 +      9834 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19552 16 +     32220 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933649 16 +   6242583 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2894 16 +     20839 CTGT--A---------------------------TAGA-TG---A---------ATCA
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    632 11 -      1748 --------------------------------------------ACA-CT-GA-ATCA
i Tragulus_javanicus.TraJav_scaffold_140459              I 2 C 0
s Tupaia_chinensis.KB320699.1                              2149568 22 +   4065304 CTCC--A---------------------------TGAA-TG---ACG-CT-GA-ACTG
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     3169 12 -     10553 ----------------------------------------G---ACG-CT-GA-ACTG
i Tupaia_tana.TupTan_flattened_line_97126                I 9 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737638 22 +  33153633 CTCT--A---------------------------TAAA-TT---ATG-CC-AA-ATCA
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_97021                    1869 22 -      4736 CACA--C---------------------------GCAA-TT---ATG-CT-GA-ATGA
i Uropsilus_gracilis.UroGra_scaffold_97021               C 0 C 0
s Ursus_maritimus.KK499267.1                               4846870 22 -   5085361 CTCT--A---------------------------CAAA-TT---ATG-CT-GA-ATAG
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368342 22 -   5488506 CACC--G---------------------------TAAC-TT---ATG-CC-AA-ATCA
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7347 22 -     43706 CTCT--A---------------------------CAAA-TT---ATG-CT-CA-ATCG
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19683 14 -     24430 -------------------------------------A-TG---ATG-CC-AA-AGTG
i Xerus_inauris.XerIna_scaffold_48378                    I 8 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1795 22 +      2932 CTCT--A---------------------------CAAA-AA---ATG-CT-GA-ATCG
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9960 14 +     63895 -------------------------------------A-TC---ATG-CC-AA-ATTG
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 8 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11338 14 +     12536 -------------------------------------A-TT---ATT-CC-GA-ATCA
i Ziphius_cavirostris.ZipCav_flattened_line_71469        I 8 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    15418  9 -    145209 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1085 18 +     62944 CATGACACA-GAAT-------GGTTC
s Acinonyx_jubatus.LLWD01001279.1                           823266 18 -   1699592 AATGAAATG-GAAT-------TGCCG
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506957 18 -  29979442 aatgaaatg-aaat-------tgctA
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             75181 18 -    347723 GATGAAATG-AAAT-------TGCTA
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64960 15 -     89534 AGTGGGGTA-GAAT-------TA---
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9281 18 -     52922 CATGAAATA-GAAT-------GGTTC
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9208 18 -     28001 CATGAAACA-GAAT-------GGTTC
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9334 18 -      9772 CATGAAATA-GAAT-------GGTTC
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            491 18 -     12518 CATGAAATA-GAAT-------GGTTC
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675131 18 -   2318259 AATAAAGTG-GAAT-------TGTTA
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183080 18 +    412891 CATGAAATA-GACT-------TGTTA
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97583 18 -    100397 AATAAAACA-GAAT-------TGTTA
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7240 15 +     20879 AGCAAAATG-GAAT-------CA---
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14418 18 +     17124 AATAAAATA-GAAT-------TGTTA
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2432 18 +     43469 CATGAAGTA-GAAT-------TGTTA
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  49277 18 -     92717 AATGAAATA-GAAT-------TGCTA
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              49902 18 +     85213 AATGAAATA-GAAT-------TGCTA
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191516 18 +  23207421 AATGAAATG-GAAT-------TGTTA
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         1982 18 -     18090 AATGAAATG-GAAT-------TGTTA
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26053 18 +     34529 AATAAAGTG-GAAT-------TGTTA
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    199092 18 -    288883 AATAAAATG-GAAT-------TGTTA
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20272297 18 +  48749331 AATAAAATG-GAAT-------TGTTA
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1124857 18 -   1948126 AATAAAATG-GAAT-------TGTTA
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18082935 18 +  45695690 AATAAAATG-GAAT-------TGTTA
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2818424 18 +   4408762 AATAAAATG-GAAT-------TGTTA
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998875 18 -  17673402 AATGAAGTG-GAGT-------TGTTA
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331339 18 -   7040546 AATGAAGTG-GAGT-------TGTTA
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399615 18 -   1652518 AATGAAGTG-GAGT-------TGTTA
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795745 18 -  60362399 AATGAAATT-AAAT-------TGCTA
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181802 18 -    185531 AATGAAATT-AAAT-------TGCTA
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031189 18 -   9314153 AATGAAATT-AAAT-------TGCTA
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955453 18 -  59632846 AATGAAATT-AAAT-------TGCTA
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496754 18 +  63665305 AATGAAATT-AAAT-------TGCTA
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18829249 18 +  46296322 AATCAAGTG-GAAT-------TGTTA
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18059969 18 -  44709034 AATCAAGTG-GAAT-------TGTTA
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           141012 18 -    496798 aatgaaata-taat-------tgtTG
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2850 18 -     11696 AATGAAATA-GAAT-------TGTTA
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133616 15 +    179628 AATGCAATG-GAAT-------TG---
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89223 18 +    217609 ACTGGAATG-GAAT-------TGTTG
i Catagonus_wagneri.CatWag_scaffold_2839                 I 41 C 0
s Cavia_aperea.AVPZ01000300.1                             18347436 20 -  23392119 AATGAGATA-GAATCACT-A-TG---
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18359696 20 -  23407841 AATGAGATA-GAATCACT-A-TG---
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98571 20 +    143979 AATGAGATA-GAATCATT-A-TG---
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         4928 18 -      8605 AATGAAATA-TAAT-------TGTTG
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227848 18 +  27778364 aatgaaata-gaat-------tatta
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2566 18 -      3715 AATGAAATA-GAAT-------TATTA
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470252 18 +   4669795 CATGAAATA-GAAT-------GGTTC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8801 18 -     19203 CATGAAATA-GAAT-------GGTTC
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3220 18 +      8260 CATGAAATA-GAAT-------GGTTC
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3450 18 +     27781 CATGAAATA-GAAT-------GGTTC
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3596 18 -     20310 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6580 18 +     29689 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             933 18 +      9989 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9268 18 -     27936 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9287 18 -     11289 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811663 18 +  39242232 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217354 18 -  21565898 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34474 18 -     53127 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1766 18 +      7159 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9279 18 -     27947 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9255 18 +     17596 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39749 18 -     41420 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4770 18 -      6351 GATGCAATG-AAAT-------TGCTG
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16695 18 -     52598 AATGAAACA-GAAT-------TGATA
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12044 18 +     57038 AATGAAATA-GAAT-------TGATA
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1248469 17 +   2543920 AATGAAATA-GAATGA-T----A---
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18423218 18 -  18827391 CATGAAACA-GAAT-------GGTTC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9661 18 -     50209 CATGAAACA-GAAT-------GGTTC
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416666 18 + 135778131 CATGAAATA-GAAT-------GGTTC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15127 18 +     19366 AATGGAATA-GAAT-------TGCTA
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170226 18 +    839153 aatggaata-gaat-------tgctA
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1905195 18 +   2368649 CATGAAATA-GAGT-------GGCCC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944867 16 + 200372422 CATGAAATA-G--T-------GGCTC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31734 18 +     84244 CATGAAATA-GAGT-------GGCCC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545957 18 -  53390261 AATGAAATG-GAAT-------TGCTG
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10469 15 -     20389 AGTGAAATG-AAAT-------TG---
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_109268              7529 13 +      9948 ---AAAGTA-TC---------TATGA
i Crocidura_indochinensis.CroInd_scaffold_109268         T 17 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24211 18 -     87169 AATGAAATG-GAAT-------TCCTA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2821 20 +      5455 AATGAAACA-GAATCA-TGA-TG---
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1204 20 +      3576 AATGAAATA-GAATCATT-A-CA---
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            61040 18 +   2246927 aatggaata-aaat-------tgctA
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532865 18 -  12879189 AATGAAAAA-GAAT-------TGTTA
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811152 18 +  35494412 AATGAAATG-GAAT-------TGTTA
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8627881 18 +  20541912 AATGAAATA-GAAT-------TGTTG
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669381 18 +   1390856 AATGAAATA-GAAT-------TATTA
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2456 18 +    198055 AATGAAATA-GAAT-------TACTA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34247 17 +     67921 AATGAAATA-GAATCA-T----G---
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18895777 15 +  37912305 GATGGAATG-GAAC-------TA---
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  11987 15 +     14536 GATGGAATG-GAAC-------TA---
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31461 20 -     42551 AATGAAATG-GAATCATT-A-CA---
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE759718.1                                   7387 18 +     11740 AATGAAATT-GAAG-------TGGTA
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310253 18 +    607251 AGTAAAATG-GAAC-------TGTTA
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1088976 18 +  10337057 AATGCAATG-GAAT-------TGCTG
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16325743 18 -  41312741 AATGAAATG-AAAC-------TGCTA
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144038 18 -  14770903 AATGAAATA-GAAT-------TGTTA
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279723 18 +   4378816 AATGGAATG-GAAT-------TGTTA
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527544 18 -  39960074 AATGAAATG-GAAT-------TGTTA
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29559 18 +    498745 AATGAAATG-GAAT-------TGTTA
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3325313 17 -   7059049 -ACAAAGTA-CTAT-------GGTCA
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21199897 18 -  21539334 CATGAAACA-GAAT-------GGTTC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10828 18 +    133382 AATGAAATG-GAAT-------TGTTA
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24765 18 -     44125 AATGAAATG-GAAT-------TGTTA
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.AANG03299807.1                                   388 18 -       507 AATGAAATG-GAAT-------TGCCA
i Felis_catus.AANG03299807.1                             C 0 C 0
s Felis_catus_fca126.CM031415.1                           20191966 18 + 205367284 AATGAAATG-GAAT-------TGCCA
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  5491 18 -     36744 AATGAAATG-GAAT-------TGCCA
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             848471 20 +   3816255 AATGGAATG-GAATCA-T-CGTA---
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galagoides_demidoff.k141_31856                              3181 18 -      3432 acaaaaata-gagc-------atatc
i Galagoides_demidoff.k141_31856                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25435 18 +     26054 AATGAAATA-GAAT-------TATTA
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30325 15 +     49224 AATGAAATG-GAAT-------TG---
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_2022027                               1945 18 +      3305 CATGAAACA-GAAT-------GGTTC
i Gorilla_beringei.k141_2022027                          T 18 T 143
s Gorilla_gorilla.CYUI03002401.1                              6238 18 +      7071 catgaaaca-gaat-------ggttc
i Gorilla_gorilla.CYUI03002401.1                         T 18 T 18
s Graphiurus_murinus.GraMur_scaffold_10447                   30053 15 +     78134 GATGAAATG-GAAT-------TA---
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238128 18 +    327341 AATGAAATG-GAAT-------TGCTA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17453 18 +     36099 AATAAAGTG-GAAT-------TGTTA
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20659350 20 +  22651954 AATGAAATT-GAATCATT-A-TA---
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 213 18 +       961 AACAGAATG-GACT-------TGCTG
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112008 18 +    128679 AATGAAATG-GAAT-------TGTTA
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108346 18 +   1711038 AAtgaaatg-gaat-------tgttt
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39787 18 +     43066 AATGAAATG-GAAT-------TGTTT
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    429428 18 +    630532 AATGAAACA-GAAT-------GGTTC
i Hoolock_leuconedys.ctg274                                 I 209 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40593 18 +     55795 AATGAAACT-GAAT-------TGCTA
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19819 20 -    143317 AATGAAATA-GAATCATT-A-TG---
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_307679                               12348 18 -     15490 CATGAAACA-GAAT-------GGTTC
i Hylobates_agilis.k141_307679                           I 211 C 0
s Hylobates_klossii.k141_282416                              54353 18 +     67168 CATGAAACA-GAAT-------GGTTC
i Hylobates_klossii.k141_282416                          I 211 C 0
s Hylobates_pileatus_b.LG02                                     189538005 18 - 191637585 CATGAAACA-GAAT-------GGTTC
i Hylobates_pileatus_b.LG02                                     I 6 C 0
s Hylobates_pileatus_a.tarseq_633                            3330898 18 -  11177569 CATGAAACA-GAAT-------GGTTC
i Hylobates_pileatus_a.tarseq_633                          I 211 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80893 20 +    135385 AATACAATA-GAATCA-TGA-TA---
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514560 15 -   7955117 agcaaaatg-aaat-------ca---
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   18137 18 +     31101 AATGAAATA-GAAT-------TGCCA
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22369 18 +     23964 AATGAAATG-GAAT-------TGTTA
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271340 15 -   9596543 AGTGGGAGA-GAAT-------TG---
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1636 18 -      3359 AATGAAATG-GAAT-------TGTTA
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    12217 18 -     42476 AATGAAATG-GAAT-------TGTTA
i Lasiurus_borealis.LasBor_scaffold_32767                I 22 C 0
s Lepilemur_ankaranensis.k141_596936                          6771 18 -     23766 AATGAAACA-GAAT-------TGCTA
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24718 18 +     45836 AATGAAACA-GAAT-------TGCTA
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31629 18 -     32627 AATGAAACA-GAAT-------TGCTA
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      22773 18 +     54090 AATGAAACA-GAAT-------TGCTA
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3036076 18 +   3914936 aataaaatg-aaat-------tgcta
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             267447 18 -    662738 AATGAAATG-GAAT-------TGTTA
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1431795 18 +   1826925 CATGAAATA-GAAT-------GGTTC
i Lophocebus_aterrimus.ctg367                            I 373 T 373
s Loris_lydekkerianus.k141_2539221                             668 15 +     11245 ---AAAACA-GAAT-------TGTTA
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999504 15 +   6120653 ---AAAACA-GAAT-------TGTTA
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214486 18 -  43346337 AATAGAAGG-GAAT-------TGCTA
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951693 18 -  59628241 AATGAAATT-AAAT-------TGCTA
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               1607 18 +     40492 CATGAAATA-GAAT-------GGTTC
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670867 18 +  60120075 CATGAAATA-GAAT-------GGTTC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7365 18 -     26193 CATGAAATA-GAAT-------GGTTC
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75159 18 -    114318 CATGAAATA-GAAT-------GGTTC
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   878 18 -     23192 CATGAAATA-GAAT-------GGTTC
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10331 18 -     29190 CATGAAATA-GAAT-------GGTTC
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18898 18 +     37952 CATGAAATA-GAAT-------GGTTC
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833986 18 + 187317192 CATGAAATA-GAAT-------GGTTC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452547 18 -  25927173 CATGAAATA-GAAT-------GGTTC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74747 18 +     89720 CATGAAATA-GAAT-------GGTTC
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1744 18 +     20474 CATGAAATA-GAAT-------GGTTC
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1545 18 -     14993 CATGAAATA-GAAT-------GGTTC
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324418 18 -    668171 CATGAAATA-GAAT-------GGTTC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15687 18 -     15935 CATGAAATA-GAAT-------GGTTC
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20484 18 -     45290 CATGAAATA-GAAT-------GGTTC
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87533 18 +     94391 AATGAAATT-GAAG-------TGGTA
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23932039 18 -  24302211 CATGAAATA-GAAA-------GGTTC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346217 18 +    752769 CATGAAATA-GAAA-------GGTTC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15578 18 +    737560 aatgaaatg-aaat-------tgttA
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              46967 18 -    317179 aatgaaatg-aaat-------tgttA
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097410 15 -  40650429 agcaaaatg-aaat-------ca---
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6748 18 -    207569 AATAAAATG-GAAT-------TGTTA
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6207 18 +     13704 AATGAAATG-AAAT-------TGTTA
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3037 18 +     10310 AATGAAATG-GAAT-------TGTAA
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18283297 18 -  93316391 AGTGAAATA-GAAT-------TGCTA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13392 18 -     19307 AATGAAATA-GAAT-------TGTTA
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849066 18 +   8254450 aataaaata-taat-------tgtta
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32942 18 +     64694 AATAAAATA-TAAT-------TGTCA
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3774 18 -     28506 CATGAAATA-GAAT-------GGTTC
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62406 18 -     63350 AATAAAATG-AAAT-------TGCTA
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      4652 17 -     37649 AATGAAA-A-GAAT-------TGCTA
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26542 18 -    437263 AATGAAATG-GAAT-------TGTTA
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137798 18 -    366855 AATGAAAAT-GAAT-------TGTTA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_61429                  27393 18 -     27816 AATAAAATG-GAAT-------TGTTA
i Moschus_moschiferus.MosMos_scaffold_61429              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31329 18 +     37127 AATGAAATA-GAAT-------TGCTA
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5092 18 +     14753 AATGAAATG-GAAT-------TGTTA
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2318 15 +     14296 AATGAAATG-GAAT-------TG---
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               297638 18 -  14710649 AATGAAATG-AAAT-------TGCTA
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                278262 18 -  10118263 AATGAAATG-GAAT-------TGTTA
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585819 18 -   6019432 AATGAAATG-GAAT-------TGTTA
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902028 18 -   4330536 AATGAAATG-GAAT-------TGTTA
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32587 18 +     33610 AATGAAATG-GAAT-------TGTTA
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186078 18 +    196477 ACTGGAATG-AAAT-------TGCTG
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025481 20 -   3037898 AATGGAGTG-GCATCTCT-C-TA---
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                                9787 18 +     21681 CATGAAATA-GAAT-------GGTTC
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865498 18 +   7148211 AATGAAATG-GAAT-------TGTTA
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756362 18 +    783361 AATGAAATA-GAAT-------TGCTA
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145954 18 -   9404916 AATGAAATT-AAAT-------TGCTA
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102574472 15 - 196305487 ---AAAACA-GAAT-------TTTTA
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2158 15 +      8486 ---AAAACA-GAAT-------TTTTA
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744899 15 + 199412804 ---AAAACA-GAAT-------TTTTA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355733  9 +   3988456 A------TT-GCTA-------GA---
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              500695 18 -   2017862 aataaaatg-aaac-------tgcTA
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         144625 18 +    630418 GGCAAAATG-GAAC-------GGTTA
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  2781413 18 -  10937097 AATGAAATG-GAAT-------TGTTA
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6811 18 -     18566 AATACAATG-GAAT-------TACTA
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458708 18 -    559221 AATGAAATT-AAAT-------TGCTA
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17584984 18 +  44047080 AATAAAGTG-TAAT-------TGTTA
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173405 18 -    191736 AATAAAGTG-TAAT-------TGTTA
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    36170 18 +     80009 caggaaaca-gaat-------tgtta
i Pan_paniscus.KQ411613.1                                T 2328 C 0
s Pan_troglodytes.CM009242.2                             187570162 18 + 189151597 caggaaaca-gaat-------tgtta
i Pan_troglodytes.CM009242.2                             n 611 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  147113 18 +    230217 AATGAAATG-GAAT-------TGCGA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                259822 18 +  18783137 AATGAAATG-GAAT-------TGCGA
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4716969 18 -   8748460 AATGAAATG-GAAT-------TGCGA
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1264338 18 -   2937107 AATAAAGTG-GAAT-------TGTTA
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183437361 18 + 183742232 CATGAAATA-GAAT-------GGTTC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1519 18 +     20448 CATGAAATA-GAAT-------GGTTC
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20558045 18 +  20919399 CATGAAATA-GAAT-------GGTTC
i Papio_hamadryas.Contig39                               T 279 C 0
s Papio_kindae.k141_1936966                                    262 18 +     41871 CATGAAATA-GAAT-------GGTTC
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     3548 18 +     27711 CATGAAATA-GAAT-------GGTTC
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  3447 18 +      9205 CATGAAATA-GAAT-------GGTTC
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8848 18 -     78924 AATGAAACG-AAAT-------TGGTA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            4651 18 +     13100 AATAAAACA-GAAT-------TGCTA
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             3019 18 +     25941 AATAAAACA-GAAT-------TGCTA
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25818 20 -     29689 AATAAAATA-GAATCATT-A-TA---
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8460 18 +     63832 AATGAAATG-GAAT-------TGTTA
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38303 18 +     62158 CATGAAATA-GAAT-------GGCTC
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33030 18 +     89929 CATGAAATA-GAAT-------GGCTC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34446 18 +     51399 CATGAAATA-GAAT-------GGCTC
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290667 18 -  14605196 CATGAAATA-GAAT-------GGCTC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              412 18 +     22620 AATGAAATG-GAAT-------TGTTA
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34166 18 +     35617 AATGAAATG-GAAT-------TGTTA
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189125515 18 + 189387572 CATGAAACA-GAAT-------GGTTC
i Pongo_abelii.CM009266.2                                C 0 I 205
s Pongo_pygmaeus.ctg66                                     9565051 18 +   9816681 CATGAAACG-GAAT-------GGTTC
i Pongo_pygmaeus.ctg66                                   T 267 I 273
s Presbytis_comata.k141_677006                               67947 18 -     81375 CATGAAATA-GAAT-------GGTTC
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9774 18 +     10147 CATGAAATA-GAAT-------GGTTC
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9974 18 -     22811 AACAGAATG-GACT-------TGCTG
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986348 18 +   2598838 AATGAAATA-GAAT-------TGCTA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          24637 18 +     38485 AATGAAATA-GAAT-------TGCTA
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                              798 18 +      4256 AATGAAATA-GAAT-------TGCTA
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22156 18 +     35766 AATGAAATA-GAAT-------TGCTA
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            339 18 -     24134 AATGAAATA-GAAT-------TGCTA
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24151 18 -     67325 AATGAAATA-GAAT-------TGCTA
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            396 18 -      6182 AATGAAATA-GAAT-------TGCTA
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11180 18 -     21811 AATAGAGTA-GAAC-------TGCTA
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36649 18 +     42204 AATGAAATG-AAAT-------TGCTA
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973656 18 +  28871421 AATGAAATT-GAAG-------TGGTA
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1593 18 -      8028 AATGAAATT-GAAG-------TGGTA
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20270280 18 -  38429054 AATGAAATG-GAAT-------TGCCA
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                              9776 18 -     91421 CATGGAATG-GAAT-------GGTTC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603910 18 +   7812017 CATGGAATG-GAAT-------GGTTC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9749 18 -     72585 CATGGAATG-GAAT-------GGTTC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4873 18 +     55207 GGTAAAATG-GAAC-------GGTTA
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        366891 18 -   3329780 aatgaaata-gaat-------tgttA
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             1162 18 -     11128 CATGAAATA-GAAT-------GGTcc
i Rhinopithecus_bieti.k119_217274                        C 0 I 300
s Rhinopithecus_roxellana.NC_044550.1                     91230539 18 - 195417433 CATGAAATA-GAAT-------GGTcc
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 240
s Rhinopithecus_strykeri.ctg102                            7666247 18 +   7961872 CATGAAATA-GAAT-------GGTcc
i Rhinopithecus_strykeri.ctg102                          C 0 I 220
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84642 18 -     96226 AATGAAATT-GAAG-------TGGTA
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3526 18 +      4321 AATAAAGTG-GAAT-------TGTTA
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 C 0
s Semnopithecus_entellus.k141_11662                          14291 18 -     19888 CGTGAAATA-GAAT-------GGTTC
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21496 18 +     39453 CGTGAAATA-GAAT-------GGTTC
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2020 18 +     27826 CGTGAAATA-GAAT-------GGTTC
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1542 18 -     19483 CGTGAAATA-GAAT-------GGTTC
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1604 18 +      7198 CGTGAAATA-GAAT-------GGTTC
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9864 18 +     15514 CGTGAAATA-GAAT-------GGTTC
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187663 18 -    191337 GATGAAATT-GAAA-------AGTCA
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13646997 14 -  18376816 ---AAAGGAGTT---------TATTA
i Sorex_araneus.JH798187.1                               I 3 C 0
s Spermophilus_dauricus.KZ294078.1                         1948202 15 -   3870691 agcaaaatg-aaat-------ca---
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27191 18 +     97271 AATGAAATG-AAAT-------CAGTA
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14198 18 -    196729 AATGAAATG-GGAT-------TGCTA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   62882432 18 -  69701581 AATGAAATG-GAAT-------TTTGA
i Sus_scrofa.CM000828.4                                  I 2 C 0
s Symphalangus_syndactylus.tarseq_199                      1088046 18 -   1523678 CATGAAACA-GAAT-------GGTTC
i Symphalangus_syndactylus.tarseq_199                    I 212 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6795 18 +     41958 AATGAAAAG-GAAT-------TGTTA
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69440 18 +    116680 ACTGGAATG-AAAT-------TGCTA
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115178 18 -    156842 AATGAAATG-GAAT-------TGTTA
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383633 18 +    539355 AATGAAATG-GAAT-------TGTTG
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10627 18 +     70052 AATGAAATA-TAAT-------TGTTG
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               14932 18 +     25099 AATGAAATA-TAAT-------TGTTG
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422870 18 + 186847797 CATGAAATA-GAAT-------GGTTC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103159 20 +    114563 AATGAAATA-GAATCATT-A-TA---
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   1828 18 +      8208 AATGGAATA-AAAT-------GGCTG
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78936 18 +    610378 CATGAAATA-GAAT-------TGTTA
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          5601 18 -     20410 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9793 18 +     15221 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5701 18 +     19930 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2128 18 -     19997 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42247 18 -     60166 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9719 18 -     27529 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9659 18 -     18194 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3395 18 -     21137 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2097 18 -     10723 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1250 18 +      9834 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19568 18 +     32220 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933665 18 +   6242583 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2910 18 +     20839 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    643 18 -      1748 GATGAAATG-AAAT-------TGTTA
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 C 0
s Tupaia_chinensis.KB320699.1                              2149590 18 +   4065304 AATGAAATG-GAAT-------GGCTA
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     3181 18 -     10553 AGTGATATG-GAAT-------TGCTA
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737660 18 +  33153633 AATGAAATG-GAAC-------TGTTA
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_97021                    1891 18 -      4736 AATGAAATG-GAAA-------TGCTA
i Uropsilus_gracilis.UroGra_scaffold_97021               C 0 C 0
s Ursus_maritimus.KK499267.1                               4846892 18 -   5085361 AATGAAACG-AAAT-------TGCTA
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368364 18 -   5488506 AATGAAGTG-GAGT-------TACTA
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7369 18 -     43706 AATGAAATT-AAAT-------TGCTA
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19697 15 -     24430 AATAAAATG-GAAC-------CA---
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1817 18 +      2932 AATAAAATG-AAAT-------TGCTA
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9974 15 +     63895 AGAGGGAGG-GAAT-------CA---
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11352 18 +     12536 AATGAACTG-GAAT-------TGTAA
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    151359  0 -    313613 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25316 22 +     32600 T
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    15418  9 -    145209 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1103 4 +     62944 CGT-----T
s Acinonyx_jubatus.LLWD01001279.1                           823284 1 -   1699592 T--------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 2
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506975 4 -  29979442 CAT-----C
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             75199 4 -    347723 CAT-----T
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64975 7 -     89534 --TAATTTT
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9299 4 -     52922 CAT-----T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9226 4 -     28001 CAT-----T
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9352 4 -      9772 CAT-----T
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            509 4 -     12518 CAT-----T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675149 4 -   2318259 TAT-----T
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183098 4 +    412891 TAT-----T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97601 4 -    100397 TAT-----T
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7255 2 +     20879 --T-----A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14436 4 +     17124 AGT-----G
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2450 4 +     43469 TAT-----T
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  49295 4 -     92717 AAT-----C
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              49920 4 +     85213 AAT-----C
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191534 4 +  23207421 TAT-----T
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2000 4 -     18090 TAT-----T
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26071 4 +     34529 TAT-----T
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    199110 4 -    288883 TAT-----T
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20272315 4 +  48749331 TAT-----T
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1124875 4 -   1948126 TAT-----T
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18082953 4 +  45695690 TAT-----T
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2818442 4 +   4408762 TAT-----T
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998893 4 -  17673402 TGT-----C
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331357 4 -   7040546 TGT-----C
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399633 4 -   1652518 TGT-----C
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795763 4 -  60362399 TAC-----T
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181820 4 -    185531 TAC-----T
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031207 4 -   9314153 TAC-----T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955471 4 -  59632846 TAC-----T
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496772 4 +  63665305 TAC-----T
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18829267 4 +  46296322 TAT-----T
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18059987 4 -  44709034 TAT-----T
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           141030 4 -    496798 AAG-----T
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2868 4 -     11696 TAT-----T
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133631 2 +    179628 --C-----T
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89241 4 +    217609 TAT-----T
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18347456 2 -  23392119 --T-----T
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18359716 2 -  23407841 --T-----T
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98591 2 +    143979 --T-----T
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         4946 4 -      8605 AAT-----T
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227866 4 +  27778364 tat-----t
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2584 4 -      3715 TAT-----T
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470270 4 +   4669795 CGT-----T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8819 4 -     19203 CGT-----T
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3238 4 +      8260 CGT-----T
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3468 4 +     27781 CGT-----T
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3614 4 -     20310 CAT-----T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6598 4 +     29689 CAT-----T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             951 4 +      9989 CAT-----T
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9286 4 -     27936 CAT-----T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9305 4 -     11289 CAT-----T
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811681 4 +  39242232 CAT-----T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217372 4 -  21565898 CAT-----T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34492 4 -     53127 CAT-----T
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1784 4 +      7159 CAT-----T
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9297 4 -     27947 CAT-----T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9273 4 +     17596 CAT-----T
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39767 4 -     41420 CAT-----T
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4788 4 -      6351 CAT-----T
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16713 4 -     52598 AAT-----C
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12062 4 +     57038 AAT-----C
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1248486 2 +   2543920 --T-----T
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18423236 4 -  18827391 CAT-----T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9679 4 -     50209 CAT-----T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416684 4 + 135778131 CAT-----T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15145 4 +     19366 CAT-----T
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170244 4 +    839153 CAT-----T
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1905213 4 +   2368649 CAT-----T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944883 4 + 200372422 CAT-----T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31752 4 +     84244 CAT-----T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545975 4 -  53390261 TAT-----T
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10484 4 -     20389 TAT-----C
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_109268              7542 4 +      9948 CAT-----T
i Crocidura_indochinensis.CroInd_scaffold_109268         C 0 T 17
s Cuniculus_paca.CunPac_flattened_line_231100                 2841 2 +      5455 --T-----G
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1224 2 +      3576 --T-----T
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24229 1 -     87169 T--------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 2
s Dasypus_novemcinctus.JH564415.1                            61058 4 +   2246927 TGT-----T
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532883 4 -  12879189 AAT-----T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811170 4 +  35494412 TAT-----T
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8627899 4 +  20541912 TAT-----T
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669399 4 +   1390856 TAT-----T
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2474 4 +    198055 TAT-----T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34264 2 +     67921 --T-----T
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18895792 2 +  37912305 --T-----T
i Dipodomys_ordii.KN672350.1                             C 0 I 5
s Dipodomys_stephensi.DipSte_scaffold_75855                  12002 2 +     14536 --T-----T
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 I 5
s Dolichotis_patagonum.DolPat_scaffold_30833                 31481 2 -     42551 --T-----T
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE759718.1                                   7405 4 +     11740 CAT-----T
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310271 4 +    607251 TAT-----T
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1088994 4 +  10337057 CAT-----T
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16325761 4 -  41312741 CAT-----T
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144056 4 -  14770903 TAT-----C
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279741 4 +   4378816 TAT-----G
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527562 4 -  39960074 TAT-----G
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29577 4 +    498745 TAT-----G
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3325330 4 -   7059049 TAT-----C
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21199915 4 -  21539334 CAT-----T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10846 4 +    133382 CAT-----T
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24783 4 -     44125 TAT-----T
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Fukomys_damarensis.KN121974.1                             848491 2 +   3816255 --C-----T
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Felis_catus.AANG03299807.1                                   406 1 -       507 T--------
i Felis_catus.AANG03299807.1                             C 0 I 2
s Felis_catus_fca126.CM031415.1                           20191984 1 + 205367284 T--------
i Felis_catus_fca126.CM031415.1                          C 0 I 2
s Felis_nigripes.FelNig_flattened_line_20823                  5509 1 -     36744 T--------
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 2
s Galagoides_demidoff.k141_31856                              3199 4 -      3432 aac-----a
i Galagoides_demidoff.k141_31856                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25453 4 +     26054 TAT-----T
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30340 2 +     49224 --T-----T
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              10404 4 -     32273 CAT-----T
i Gorilla_beringei.k141_3596273                          I 24 I 140
s Gorilla_gorilla.LT578341.1                             186332554 4 + 186649187 CAT-----T
i Gorilla_gorilla.LT578341.1                             T 106 I 140
s Graphiurus_murinus.GraMur_scaffold_10447                   30068 2 +     78134 --T-----T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238146 1 +    327341 T--------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 2
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17471 4 +     36099 TAT-----T
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20659370 2 +  22651954 --T-----T
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 231 4 +       961 TAT-----C
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112026 4 +    128679 TAT-----T
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108364 4 +   1711038 tat-----c
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39805 4 +     43066 TAT-----C
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    429446 4 +    630532 CAT-----T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19839 2 -    143317 --T-----T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40611 1 +     55795 T--------
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 2
s Hylobates_agilis.k141_307679                               12366 4 -     15490 CAT-----T
i Hylobates_agilis.k141_307679                           C 0 T 205
s Hylobates_klossii.k141_282416                              54371 4 +     67168 CAT-----T
i Hylobates_klossii.k141_282416                          C 0 T 205
s Hylobates_pileatus_b.LG02                                     189538023 4 - 191637585 CAT-----T
i Hylobates_pileatus_b.LG02                                     C 0 T 205
s Hylobates_pileatus_a.tarseq_633                            3330916 4 -  11177569 CAT-----T
i Hylobates_pileatus_a.tarseq_633                          C 0 T 205
s Hystrix_cristata.HysCri_scaffold_5660                      80913 2 +    135385 --C-----T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514575 2 -   7955117 --t-----a
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   18155 4 +     31101 AAT-----C
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22387 4 +     23964 TAT-----T
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271355 7 -   9596543 --TGATTTT
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1654 4 -      3359 TAT-----T
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    12235 4 -     42476 TAT-----T
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6789 4 -     23766 AAT-----C
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24736 4 +     45836 AAT-----C
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31647 4 -     32627 AAT-----C
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      22791 4 +     54090 AAT-----C
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3036094 4 +   3914936 CAT-----T
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             267465 4 -    662738 TAT-----T
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1431440 4 +   1826925 CGT-----T
i Lophocebus_aterrimus.ctg367                            T 373 C 0
s Loris_lydekkerianus.k141_2539221                             683 4 +     11245 AGT-----G
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999519 4 +   6120653 AGT-----G
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214504 4 -  43346337 TAT-----C
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951711 4 -  59628241 TAC-----T
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               1625 4 +     40492 CGT-----T
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670885 4 +  60120075 CGT-----T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7383 4 -     26193 CGT-----T
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75177 4 -    114318 CGT-----T
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   896 4 -     23192 CGT-----T
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10349 4 -     29190 TGT-----T
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18916 4 +     37952 CGT-----T
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834004 4 + 187317192 CGT-----T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452565 4 -  25927173 CGT-----T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74765 4 +     89720 CGT-----T
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1762 4 +     20474 CGT-----T
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1563 4 -     14993 CGT-----T
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324436 4 -    668171 CGT-----T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15705 4 -     15935 CGT-----T
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20502 4 -     45290 CGT-----T
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87551 4 +     94391 TAT-----T
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23932057 4 -  24302211 CGT-----T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346235 4 +    752769 CGT-----T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15596 4 +    737560 TAT-----T
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              46985 4 -    317179 TAT-----T
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097425 2 -  40650429 --t-----a
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6766 4 -    207569 TAT-----C
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6225 4 +     13704 CAT-----T
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3055 4 +     10310 TAT-----T
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18283315 4 -  93316391 AAT-----C
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13410 4 -     19307 CAC-----T
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849084 4 +   8254450 tat-----t
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32960 4 +     64694 TAT-----T
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3792 4 -     28506 CAT-----T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62424 4 -     63350 CAT-----T
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      4669 4 -     37649 AAT-----C
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26560 4 -    437263 TAT-----T
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137816 4 -    366855 TAT-----C
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_61429                  27411 4 -     27816 TAT-----T
i Moschus_moschiferus.MosMos_scaffold_61429              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31347 1 +     37127 T--------
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 2
s Murina_feae.MurFea_scaffold_85699                           5110 4 +     14753 TAT-----T
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2333 2 +     14296 --T-----T
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               297656 4 -  14710649 CAT-----T
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                278280 4 -  10118263 TAT-----T
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585837 4 -   6019432 TAT-----T
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902046 4 -   4330536 TAT-----T
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32605 4 +     33610 TAT-----T
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186096 4 +    196477 TAT-----T
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025501 2 -   3037898 --T-----T
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                                9805 4 +     21681 CAT-----T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865516 4 +   7148211 TAT-----T
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756380 4 +    783361 TAT-----T
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145972 4 -   9404916 TAC-----T
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102574487 4 - 196305487 AGT-----G
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2173 4 +      8486 AGT-----G
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744914 4 + 199412804 AGT-----G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355742 2 +   3988456 --T-----T
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              500713 4 -   2017862 CAT-----T
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         144643 4 +    630418 TAT-----T
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  2781431 4 -  10937097 TAT-----T
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6829 4 -     18566 TAT-----T
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458726 4 -    559221 TAC-----T
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17585002 4 +  44047080 TAT-----T
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173423 4 -    191736 TAT-----T
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    36188 4 +     80009 cat-----t
i Pan_paniscus.KQ411613.1                                C 0 I 2335
s Pan_troglodytes.CM009242.2                             187570180 4 + 189151597 cat-----t
i Pan_troglodytes.CM009242.2                             C 0 n 0
s Panthera_onca.PanOnc_flattened_line_3271                  147131 1 +    230217 T--------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 2
s Panthera_pardus.KV860321.1                                259840 1 +  18783137 T--------
i Panthera_pardus.KV860321.1                             C 0 I 2
s Panthera_tigris.KE722367.1                               4716987 1 -   8748460 T--------
i Panthera_tigris.KE722367.1                             C 0 I 2
s Pantholops_hodgsonii.KE114653.1                          1264356 4 -   2937107 TAT-----T
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183437379 4 + 183742232 CGT-----T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1537 4 +     20448 CGT-----T
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20558063 4 +  20919399 CGT-----T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                    280 4 +     41871 CGT-----T
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     3566 4 +     27711 CGT-----T
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  3465 4 +      9205 CGT-----T
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8866 1 -     78924 T--------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 2
s Perodicticus_ibeanus.k141_855320                            4669 4 +     13100 AGT-----G
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             3037 4 +     25941 AGT-----G
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25838 2 -     29689 --T-----T
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8478 4 +     63832 TAT-----T
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38321 4 +     62158 CAT-----T
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33048 4 +     89929 CAT-----T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34464 4 +     51399 CAT-----T
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290685 4 -  14605196 CAT-----T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              430 4 +     22620 TAT-----T
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34184 4 +     35617 TAT-----T
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189125738 4 + 189387572 CAT-----T
i Pongo_abelii.CM009266.2                                I 205 C 0
s Pongo_pygmaeus.ctg66                                     9565342 4 +   9816681 CAT-----T
i Pongo_pygmaeus.ctg66                                   I 273 C 0
s Presbytis_comata.k141_677006                               67965 4 -     81375 CAT-----T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9792 4 +     10147 CAT-----T
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9992 4 -     22811 TAT-----C
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986366 4 +   2598838 AAT-----C
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          24655 4 +     38485 AAT-----C
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                              816 4 +      4256 AAT-----C
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22174 4 +     35766 AAT-----C
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            357 4 -     24134 AAT-----C
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24169 4 -     67325 AAT-----C
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            414 4 -      6182 AAT-----C
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11198 4 -     21811 CAT-----T
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36667 4 +     42204 CAT-----T
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973674 4 +  28871421 TAT-----T
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1611 4 -      8028 TAT-----T
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20270298 1 -  38429054 T--------
i Puma_concolor.QAVW01001104.1                           C 0 I 2
s Pygathrix_cinerea.k141_1153803                              9794 4 -     91421 CAT-----T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603928 4 +   7812017 CAT-----T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9767 4 -     72585 CAT-----T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4891 4 +     55207 TAT-----T
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        366909 4 -   3329780 TAT-----C
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             1480 4 -     11128 cat-----t
i Rhinopithecus_bieti.k119_217274                        I 300 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230797 4 - 195417433 cat-----t
i Rhinopithecus_roxellana.NC_044550.1                    I 240 I 40
s Rhinopithecus_strykeri.ctg102                            7666485 4 +   7961872 cat-----t
i Rhinopithecus_strykeri.ctg102                          I 220 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84660 4 -     96226 TAT-----T
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3544 4 +      4321 TAT-----T
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151359 2 -    313613 --T-----T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          14309 4 -     19888 CAT-----T
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21514 4 +     39453 CAT-----T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2038 4 +     27826 CAT-----T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1560 4 -     19483 CAT-----T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1622 4 +      7198 CAT-----T
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9882 4 +     15514 CAT-----T
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187681 4 -    191337 TAT-----T
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13647011 4 -  18376816 TAT-----C
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1948217 2 -   3870691 --t-----a
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27209 4 +     97271 CAT-----T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14216 1 -    196729 T--------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 2
s Sus_scrofa.CM000828.4                                   62882450 4 -  69701581 CAT-----T
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1088064 4 -   1523678 CAT-----T
i Symphalangus_syndactylus.tarseq_199                    C 0 T 206
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6813 4 +     41958 TAT-----T
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69458 4 +    116680 TAT-----T
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115196 4 -    156842 CAT-----C
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383651 4 +    539355 CAT-----C
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10645 4 +     70052 AAT-----T
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               14950 4 +     25099 AAT-----T
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422888 4 + 186847797 CGT-----T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103179 2 +    114563 --T-----T
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   1846 4 +      8208 CAT-----T
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78954 4 +    610378 CAT-----T
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          5619 4 -     20410 CAT-----T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9811 4 +     15221 CAT-----T
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5719 4 +     19930 CAT-----T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2146 4 -     19997 CAT-----T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42265 4 -     60166 CAT-----T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9737 4 -     27529 CAT-----T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9677 4 -     18194 CAT-----T
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3413 4 -     21137 CAT-----T
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2115 4 -     10723 CAT-----T
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1268 4 +      9834 CAT-----T
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19586 4 +     32220 CAT-----T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933683 4 +   6242583 CAT-----T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2928 4 +     20839 CAT-----T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    661 4 -      1748 TAT-----T
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 C 0
s Tupaia_chinensis.KB320699.1                              2149608 4 +   4065304 TAT-----T
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     3199 4 -     10553 TAT-----T
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737678 4 +  33153633 TAT-----T
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_97021                    1909 4 -      4736 TAT-----T
i Uropsilus_gracilis.UroGra_scaffold_97021               C 0 C 0
s Ursus_maritimus.KK499267.1                               4846910 4 -   5085361 CAT-----C
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368382 4 -   5488506 TGT-----C
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7387 4 -     43706 TAC-----T
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19712 2 -     24430 --T-----A
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1835 4 +      2932 CAT-----T
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9989 7 +     63895 --TAATTTT
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11370 4 +     12536 TAT-----T
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Varecia_variegata.k141_1128296                              7155 0 +     24756 C
e Varecia_rubra.k141_590885                                   7107 0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414 0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25316 22 +     32600 T
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    15418 9 -    145209 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Lemur_catta.scaffold_24                                 15519761 0 -  30322482 C
e Hapalemur_occidentalis.k141_907772                          9234 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402 0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298 0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517 0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                               9432 0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267 0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247 0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321 0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369 0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369 0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184 0 -     25546 C
e Eulemur_collaris.k141_377015                                2154 0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453 0 -     14127 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1107 14 +     62944 G---T----CACTGAGTAGAA
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506979  5 -  29979442 A---T----CAC---------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             75203  5 -    347723 A---T----CAC---------
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64982  5 -     89534 A---G----CAC---------
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9303 14 -     52922 G---T----CACCGAGTAGAG
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9230 14 -     28001 G---T----CACCGAGTAGAA
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9356 14 -      9772 G---T----CACCGAGTAGAA
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            513 14 -     12518 G---T----CACCGAGTAGAA
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675153  5 -   2318259 A---T----CAC---------
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183102  5 +    412891 A---T----CAC---------
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97605  5 -    100397 A---T----CAC---------
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7257  5 +     20879 A---T----CAC---------
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14440  5 +     17124 G---T----CAC---------
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2454  5 +     43469 A---T----CAC---------
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  49299  5 -     92717 A---T----CAC---------
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              49924  5 +     85213 A---T----CAC---------
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191538  5 +  23207421 A---T----CAT---------
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2004  5 -     18090 A---T----CAT---------
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26075  5 +     34529 A---T----CAC---------
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    199114  5 -    288883 A---T----CAC---------
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20272319  5 +  48749331 A---T----CAC---------
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1124879  5 -   1948126 A---T----CAC---------
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18082957  5 +  45695690 A---T----CAC---------
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2818446  5 +   4408762 A---T----CAC---------
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998897  5 -  17673402 A---T----CAC---------
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331361  5 -   7040546 A---T----CAC---------
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399637  5 -   1652518 A---T----CAC---------
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795767  5 -  60362399 A---A----CAC---------
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181824  5 -    185531 A---A----CAC---------
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031211  5 -   9314153 A---A----CAC---------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955475  5 -  59632846 A---A----CAC---------
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496776  5 +  63665305 A---A----CAC---------
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18829271  5 +  46296322 A---T----CAC---------
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18059991  5 -  44709034 A---T----CAC---------
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           141034  5 -    496798 A---C----CCC---------
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2872  5 -     11696 A---T----CAC---------
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133633  9 +    179628 G---TCTTACAC---------
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89245  5 +    217609 A---T----CAC---------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18347458  5 -  23392119 A---T----TGT---------
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18359718  5 -  23407841 A---T----TGT---------
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98593  5 +    143979 A---T----TAT---------
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         4950  5 -      8605 G---C----CCC---------
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227870  5 +  27778364 a---T----CAC---------
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2588  5 -      3715 A---T----CAC---------
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470274 14 +   4669795 G---C----CACCGAGTAGAA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8823 14 -     19203 G---C----CACCGAGTAGAA
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3242 14 +      8260 G---C----CACCGAGTAGAA
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3472 14 +     27781 G---C----CACCGAGTAGAA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3618 14 -     20310 G---T----CACCGAGTAGAA
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6602 14 +     29689 G---T----CACCGAGTAGAA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             955 14 +      9989 G---T----CACCGAGTAGAA
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9290 14 -     27936 G---T----CACCGAGTAGAA
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9309 14 -     11289 G---T----CACCGAGTAGAA
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811685 14 +  39242232 G---T----CACCGAGTAGAA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217376 14 -  21565898 G---T----CACCGAGTAGAA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34496 14 -     53127 G---T----CACCGAGTAGAA
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1788 14 +      7159 G---T----CACCGAGTAGAA
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9301 14 -     27947 G---T----CATCAAGTAGAA
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9277 14 +     17596 G---T----CACCGAGTAGAA
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39771 14 -     41420 G---T----CACAGAGTAGAA
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4792  3 -      6351 A---T----C-----------
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16717  5 -     52598 A---T----CAC---------
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12066  5 +     57038 A---T----CAC---------
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1248488  5 +   2543920 A---T----CAT---------
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18423240 14 -  18827391 G---T----CACCGAGTAGAA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9683 14 -     50209 G---T----CACCGAGTAGAA
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416688 14 + 135778131 G---T----CACCGAGTAGAA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15149  5 +     19366 A---T----CAC---------
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170248  5 +    839153 A---T----CAC---------
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1905217 14 +   2368649 G---T----CACCGAGTAGAA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944887 14 + 200372422 G---T----CACCGAGTAGAA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31756 14 +     84244 G---T----CACCGAGTAGAA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545979  5 -  53390261 A---T----TAA---------
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10488  5 -     20389 A---T----CAT---------
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_287352               360  5 +      4208 A---T----CAC---------
i Crocidura_indochinensis.CroInd_scaffold_287352         I 18 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2843  5 +      5455 A---T----CAT---------
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1226  5 +      3576 A---T----CCT---------
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            61062  3 +   2246927 A---T----C-----------
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532887  5 -  12879189 A---T----TAC---------
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811174  5 +  35494412 A---T----CAC---------
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8627903  5 +  20541912 A---T----CAC---------
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669403  5 +   1390856 A---T----CAC---------
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2478  5 +    198055 A---T----CAC---------
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34266  5 +     67921 A---T----CAT---------
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18895799  5 +  37912305 A---T----TAT---------
i Dipodomys_ordii.KN672350.1                             I 5 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  12009  5 +     14536 A---T----TAT---------
i Dipodomys_stephensi.DipSte_scaffold_75855              I 5 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31483  5 -     42551 A---T----CAT---------
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE759718.1                                   7409  5 +     11740 T---T----CAT---------
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310275  5 +    607251 A---T----CAC---------
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1088998  5 +  10337057 A---C----CAC---------
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16325765  5 -  41312741 A---A----CAC---------
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144060  5 -  14770903 A---T----CCC---------
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279745  5 +   4378816 A---T----CAC---------
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527566  5 -  39960074 A---T----CAC---------
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29581  5 +    498745 A---T----CAC---------
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3325334  5 -   7059049 A---T----CAT---------
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21199919 14 -  21539334 G---T----CACCGAGTAGAA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10850  5 +    133382 A---T----CAC---------
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24787  5 -     44125 A---T----CAT---------
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Fukomys_damarensis.KN121974.1                             848493  5 +   3816255 G---T----CAT---------
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galagoides_demidoff.k141_31856                              3203  5 -      3432 c---a----ctc---------
i Galagoides_demidoff.k141_31856                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25457  5 +     26054 A---C----CAC---------
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30342  5 +     49224 G---T----CAC---------
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              10548 14 -     32273 G---T----CACCGAGTAGAA
i Gorilla_beringei.k141_3596273                          I 140 C 0
s Gorilla_gorilla.LT578341.1                             186332698 14 + 186649187 G---T----CACCGAGTAGAA
i Gorilla_gorilla.LT578341.1                             I 140 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   30070  5 +     78134 A---T----CAC---------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17475  5 +     36099 A---T----CAC---------
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20659372  5 +  22651954 A---T----CAT---------
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 235  5 +       961 A---T----CAC---------
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112030  5 +    128679 A---T----CAC---------
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108368  5 +   1711038 A---T----CAC---------
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39809  5 +     43066 A---T----CAC---------
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    429450 14 +    630532 G---T----CACCGAGTAGAA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19841  5 -    143317 A---T----CAT---------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_307679                               12165 14 -     15490 G---T----CACCGAGTAGAA
i Hylobates_agilis.k141_307679                           T 205 I 205
s Hylobates_klossii.k141_282416                              54170 14 +     67168 G---T----CACCGAGTAGAA
i Hylobates_klossii.k141_282416                          T 205 I 205
s Hylobates_pileatus_b.LG02                                     189537822 14 - 191637585 G---T----CACCGAGTAGAA
i Hylobates_pileatus_b.LG02                                     T 205 I 205
s Hylobates_pileatus_a.tarseq_633                            3330715 14 -  11177569 G---T----CACCGAGTAGAA
i Hylobates_pileatus_a.tarseq_633                          T 205 I 205
s Hystrix_cristata.HysCri_scaffold_5660                      80915  5 +    135385 A---T----CAT---------
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514577  5 -   7955117 a---t----CAT---------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   18159  5 +     31101 A---T----CAC---------
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22391  5 +     23964 A---T----CAC---------
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271362  5 -   9596543 A---G----CAC---------
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1658  5 -      3359 A---G----CAC---------
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    12239  5 -     42476 A---G----CCT---------
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6793  5 -     23766 A---T----CAC---------
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24740  5 +     45836 A---T----CAC---------
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31651  5 -     32627 A---T----CAC---------
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      22795  5 +     54090 A---T----CAC---------
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3036098  5 +   3914936 A---T----CAC---------
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             267469  5 -    662738 A---T----CAC---------
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1431444 15 +   1826925 G---TC---CACCGAGTAGAA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             687  5 +     11245 A---T----GAC---------
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999523  5 +   6120653 A---T----GAC---------
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214508  5 -  43346337 A---T----CAT---------
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951715  5 -  59628241 A---A----CAC---------
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               1629 14 +     40492 G---T----CACCGAGTAGAA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670889 14 +  60120075 G---T----CACCGAGTAGAA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7387 14 -     26193 G---T----CACCGAGTAGAA
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75181 14 -    114318 G---T----CACCGAGTAGAA
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   900 14 -     23192 G---T----CACCGAGTAGAA
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10353 14 -     29190 G---C----CACCGAGTAGAA
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18920 14 +     37952 G---T----CACCGAGTAGAA
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834008 14 + 187317192 G---T----CACCGAGTAGAA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452569 14 -  25927173 G---T----CACCGAGTAGAA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74769 14 +     89720 G---T----CACCGAGTAGAA
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1766 14 +     20474 G---T----CACCGAGTAGAA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1567 14 -     14993 G---T----CACTGAGTAGAA
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324440 14 -    668171 G---T----CACCGAGTAGAA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15709 14 -     15935 G---T----CACCGAGTAGAA
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20506 14 -     45290 G---T----CACCGAGTAGAA
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87555  5 +     94391 T---T----CAT---------
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23932061 14 -  24302211 G---C----CACCGAGTAGAA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346239 14 +    752769 G---C----CACCGAGTAGAA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15600  5 +    737560 A---C----GAC---------
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              46989  5 -    317179 A---T----CAC---------
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097427  5 -  40650429 a---t----CAT---------
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6770  5 -    207569 A---T----CAT---------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6229  5 +     13704 A---T----CAC---------
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3059  5 +     10310 A---T----CAC---------
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18283319  5 -  93316391 A---T----CAC---------
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13414  5 -     19307 A---T----CAC---------
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849088  5 +   8254450 A---T----CAC---------
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32964  5 +     64694 A---T----CAC---------
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3796 14 -     28506 G---T----CACCGAGTAGAA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62428  5 -     63350 A---T----CAC---------
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      4673  5 -     37649 A---T----CAC---------
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26564  5 -    437263 A---T----CAC---------
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137820  5 -    366855 G---T----TAC---------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_61429                  27415  5 -     27816 A---T----CAC---------
i Moschus_moschiferus.MosMos_scaffold_61429              C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5114  5 +     14753 A---T----TCC---------
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2335  5 +     14296 A---T----CAC---------
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               297660  5 -  14710649 A---T----CAC---------
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                278284  5 -  10118263 A---T----CCC---------
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585841  5 -   6019432 A---T----CCT---------
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902050  5 -   4330536 A---T----CCC---------
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32609  5 +     33610 A---T----CCC---------
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186100  5 +    196477 A---T----CAT---------
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025503  5 -   3037898 A---G----CAC---------
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                                9809 14 +     21681 G---T----CACCGAGTAGAA
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865520  5 +   7148211 A---T----CAC---------
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756384  5 +    783361 G---T----CAC---------
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145976  5 -   9404916 A---A----CAC---------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102574491  5 - 196305487 A---T----CAC---------
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2177  5 +      8486 A---T----CAC---------
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744918  5 + 199412804 A---T----CAC---------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355744  5 +   3988456 A---T----TAC---------
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              500717  5 -   2017862 A---T----CAC---------
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         144647  5 +    630418 A---T----CAC---------
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  2781435  5 -  10937097 A---T----CAC---------
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6833  5 -     18566 G---C----CAC---------
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 I 12
s Otocyon_megalotis.JAEUCK010005147.1                       458730  5 -    559221 A---A----CAC---------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17585006  5 +  44047080 A---T----CAC---------
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173427  5 -    191736 A---T----CAC---------
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    38527 14 +     80009 g---t----caccgagtagaa
i Pan_paniscus.KQ411613.1                                I 2335 C 0
s Pan_troglodytes.NBAG03001836.1                             24368 17 +     51860 gtcat----cactgagtagaa
i Pan_troglodytes.NBAG03001836.1                         T 17 T 17
s Pantholops_hodgsonii.KE114653.1                          1264360  5 -   2937107 A---T----CAC---------
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183437383 14 + 183742232 G---T----CACCGAGTAGAA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1541 14 +     20448 G---T----CACCGAGTAGAA
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20558067 14 +  20919399 G---C----CACCGAGTAGAA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                    284 14 +     41871 G---T----CACCGAGTAGAA
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     3570 14 +     27711 G---T----CACCGAGTAGAA
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  3469 14 +      9205 G---C----CACCGAGTAGAA
i Papio_ursinus.k141_3428135                             C 0 C 0
s Perodicticus_ibeanus.k141_855320                            4673  5 +     13100 G---T----CAC---------
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             3041  5 +     25941 G---T----CAC---------
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25840  5 -     29689 A---T----CAC---------
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8482  5 +     63832 A---T----CAC---------
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38325 14 +     62158 G---T----CACCGAGTAGAA
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33052 14 +     89929 G---T----CACCGAGTAGAA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34468 14 +     51399 G---T----CACCGAGTAGAA
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290689 14 -  14605196 G---T----CACCGAGTAGAA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              434  5 +     22620 A---T----CCC---------
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34188  5 +     35617 A---T----CAC---------
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189125742 14 + 189387572 G---T----CACCGAGCAGAA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9565346 14 +   9816681 G---T----CACCGAGCAGAA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               67969 14 -     81375 G---T----CACCGAGTAGAA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9796 14 +     10147 G---T----CACCGAGTAGAA
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9996  5 -     22811 G---T----CAC---------
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986370  5 +   2598838 A---T----CAC---------
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          24659  5 +     38485 A---T----CAC---------
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                              820  5 +      4256 A---T----CAC---------
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22178  5 +     35766 A---T----CAC---------
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            361  5 -     24134 A---T----CAC---------
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24173  5 -     67325 A---T----CAC---------
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            418  5 -      6182 A---T----CAC---------
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11202  5 -     21811 A---T----CAC---------
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36671  5 +     42204 A---T----CAC---------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973678  5 +  28871421 T---T----CAC---------
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1615  5 -      8028 T---T----CAC---------
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                              9798 14 -     91421 G---T----CACCGAGTAGAA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603932 14 +   7812017 G---T----CACCGAGTAGAA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9771 14 -     72585 G---T----CACCGAGTAGAA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4895  5 +     55207 A---T----CAC---------
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        366913  5 -   3329780 A---T----CAC---------
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             1484 14 -     11128 g---t----caccaagtagaa
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230841 14 - 195417433 g---t----caccgagtagaa
i Rhinopithecus_roxellana.NC_044550.1                    I 40 C 0
s Rhinopithecus_strykeri.ctg102                            7666489 14 +   7961872 g---c----cgccgagtagaa
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84664  5 -     96226 T---T----CAT---------
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3548  5 +      4321 A---T----CAC---------
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151361  5 -    313613 A---T----CAA---------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          14313 14 -     19888 G---T----CACCGAGTAGAA
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21518 14 +     39453 G---T----CACCGAGTAGAA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2042 14 +     27826 G---T----CACCGAGTAGAA
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1564 14 -     19483 G---T----CACCGAGTAGAA
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1626 14 +      7198 G---T----CACCGAGTAGAA
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9886 14 +     15514 G---T----CACCGAGTAGAA
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187685  5 -    191337 A---T----CAC---------
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13647015  5 -  18376816 A---T----CAA---------
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1948219  5 -   3870691 a---t----CAT---------
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27213  5 +     97271 A---T----CAC---------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Sus_scrofa.CM000828.4                                   62882454  5 -  69701581 A---T----CAC---------
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1087862 14 -   1523678 G---T----CACCGAGTAGAA
i Symphalangus_syndactylus.tarseq_199                    T 206 I 206
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6817  5 +     41958 A---T----CAC---------
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69462  5 +    116680 A---T----CAT---------
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115200  5 -    156842 A---T----CAC---------
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383655  5 +    539355 A---T----CAC---------
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10649  5 +     70052 A---A----CCC---------
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               14954  5 +     25099 A---A----CCC---------
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422892 14 + 186847797 G---C----CACCGAGTAGAA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103181  5 +    114563 A---T----CAT---------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   1850  3 +      8208 A---T----C-----------
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78958  5 +    610378 A---C----CAC---------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          5623 11 -     20410 G---T----CACCG---AGAA
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9815 14 +     15221 G---T----CACCGAGTAGAA
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5723 11 +     19930 G---T----CACCG---AGAA
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2150 14 -     19997 G---T----CACCGAGTAGAA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42269 14 -     60166 G---T----CACCGAGTAGAA
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9741 14 -     27529 G---T----CACCGAGTAGAA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9681 14 -     18194 G---T----CACCGAGTAGAA
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3417 14 -     21137 G---T----CACCGAGTAGAA
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2119 14 -     10723 G---T----CACCGAGTAGAA
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1272 14 +      9834 G---T----CACCGAGTAGAA
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19590 14 +     32220 G---T----CACCGAGTAGAA
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933687 14 +   6242583 G---T----CACCGAGTAGAA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2932 14 +     20839 G---T----CACCGAGTAGAA
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    665  5 -      1748 A---T----CAC---------
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 C 0
s Tupaia_chinensis.KB320699.1                              2149612  5 +   4065304 A---C----CAC---------
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     3203  5 -     10553 A---T----CAC---------
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737682  5 +  33153633 A---T----CAC---------
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_97021                    1913  5 -      4736 A---T----CAC---------
i Uropsilus_gracilis.UroGra_scaffold_97021               C 0 C 0
s Ursus_maritimus.KK499267.1                               4846914  5 -   5085361 A---T----CAC---------
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368386  5 -   5488506 A---T----CAC---------
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7391  5 -     43706 A---A----CAC---------
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19714  5 -     24430 A---T----CAT---------
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1839  5 +      2932 A---T----CAC---------
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9996  5 +     63895 A---G----CAC---------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11374  5 +     12536 A---T----CAC---------
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Suricata_suricatta.SurSur_flattened_line_6629              14217  2 -    196729 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Puma_concolor.QAVW01001104.1                            20270299  2 -  38429054 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25316 22 +     32600 T
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8867  2 -     78924 I
e Panthera_tigris.KE722367.1                               4716988  2 -   8748460 I
e Panthera_pardus.KV860321.1                                259841  2 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  147132  2 +    230217 I
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mungos_mungo.MunMun_flattened_line_23663                   31348  2 +     37127 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    15418  9 -    145209 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  40612  2 +     55795 I
e Helogale_parvula.HelPar_flattened_line_2585               238147  2 +    327341 I
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Felis_nigripes.FelNig_flattened_line_20823                  5510  2 -     36744 I
e Felis_catus_fca126.CM031415.1                           20191985  2 + 205367284 I
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             24230  2 -     87169 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           823285  2 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1121 2 +     62944 CC
s Allenopithecus_nigroviridis.k141_3361533                    9317 2 -     52922 CC
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9244 2 -     28001 CC
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9370 2 -      9772 CC
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            527 2 -     12518 CC
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470288 2 +   4669795 CC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8837 2 -     19203 CC
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3256 2 +      8260 CC
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3486 2 +     27781 CC
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3632 2 -     20310 CC
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6616 2 +     29689 CC
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             969 2 +      9989 CC
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9304 2 -     27936 CC
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9323 2 -     11289 CC
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811699 2 +  39242232 CC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217390 2 -  21565898 CC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34510 2 -     53127 CC
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1802 2 +      7159 CC
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9315 2 -     27947 CC
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9291 2 +     17596 CC
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39785 2 -     41420 CC
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chlorocebus_aethiops.ctg25                              18423254 2 -  18827391 CC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9697 2 -     50209 CC
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416702 2 + 135778131 CC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1905231 2 +   2368649 CC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944901 2 + 200372422 CC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31770 2 +     84244 CC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Erythrocebus_patas.Contig38                             21199933 2 -  21539334 CC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Gorilla_beringei.k141_3596273                              10562 2 -     32273 CC
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186332712 2 + 186649187 CC
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hoolock_leuconedys.ctg274                                    429464 2 +    630532 CC
i Hoolock_leuconedys.ctg274                                 C 0 T 203
s Hylobates_agilis.k141_307679                               12384 2 -     15490 CC
i Hylobates_agilis.k141_307679                           I 205 C 0
s Hylobates_klossii.k141_282416                              54389 2 +     67168 CC
i Hylobates_klossii.k141_282416                          I 205 C 0
s Hylobates_pileatus_b.LG02                                     189538041 2 - 191637585 CC
i Hylobates_pileatus_b.LG02                                     I 205 C 0
s Hylobates_pileatus_a.tarseq_633                            3330934 2 -  11177569 CC
i Hylobates_pileatus_a.tarseq_633                          I 205 C 0
s Lophocebus_aterrimus.ctg367                              1431459 2 +   1826925 CC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                               1643 2 +     40492 CC
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670903 2 +  60120075 CC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7401 2 -     26193 CC
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75195 2 -    114318 CC
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   914 2 -     23192 CC
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10367 2 -     29190 CC
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18934 2 +     37952 CC
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834022 2 + 187317192 CC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452583 2 -  25927173 CC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74783 2 +     89720 CC
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1780 2 +     20474 CC
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1581 2 -     14993 CC
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324454 2 -    668171 CC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15723 2 -     15935 CC
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20520 2 -     45290 CC
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23932075 2 -  24302211 CC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346253 2 +    752769 CC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3810 2 -     28506 CC
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Nasalis_larvatus.k141_413338                                9823 2 +     21681 CC
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Pan_paniscus.KQ411613.1                                    38541 2 +     80009 cc
i Pan_paniscus.KQ411613.1                                C 0 T 2335
s Pan_troglodytes.CM009242.2                             189137575 2 + 189151597 cc
i Pan_troglodytes.CM009242.2                             n 17 C 0
s Papio_anubis.CM001495.2                                183437397 2 + 183742232 CC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1555 2 +     20448 CC
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20558081 2 +  20919399 CC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                    298 2 +     41871 CC
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     3584 2 +     27711 CC
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  3483 2 +      9205 CC
i Papio_ursinus.k141_3428135                             C 0 C 0
s Piliocolobus_badius.k141_1234363                           38339 2 +     62158 CC
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33066 2 +     89929 CC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34482 2 +     51399 CC
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290703 2 -  14605196 CC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189125756 2 + 189387572 CC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9565360 2 +   9816681 CC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               67983 2 -     81375 CC
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9810 2 +     10147 CC
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Pygathrix_cinerea.k141_1153803                              9812 2 -     91421 CC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603946 2 +   7812017 CC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9785 2 -     72585 CC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             1498 2 -     11128 cc
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230855 2 - 195417433 cc
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7666503 2 +   7961872 cc
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Semnopithecus_entellus.k141_11662                          14327 2 -     19888 CC
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21532 2 +     39453 CC
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2056 2 +     27826 CC
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1578 2 -     19483 CC
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1640 2 +      7198 CC
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9900 2 +     15514 CC
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1088082 2 -   1523678 CC
i Symphalangus_syndactylus.tarseq_199                    I 206 C 0
s Theropithecus_gelada.CM009954.1                        186422906 2 + 186847797 CC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          5634 2 -     20410 CC
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9829 2 +     15221 CC
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5734 2 +     19930 CC
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2164 2 -     19997 CC
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42283 2 -     60166 CC
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9755 2 -     27529 CC
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9695 2 -     18194 CC
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3431 2 -     21137 CC
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2133 2 -     10723 CC
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1286 2 +      9834 CC
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19604 2 +     32220 CC
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933701 2 +   6242583 CC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2946 2 +     20839 CC
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Loris_tardigradus.ctg83                                   999528 0 +   6120653 C
e Loris_lydekkerianus.k141_2539221                             692 0 +     11245 C
e Perodicticus_potto.k141_1092580                             3046 0 +     25941 C
e Perodicticus_ibeanus.k141_855320                            4678 0 +     13100 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            11379 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      10001 0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_63728          1844 0 +      2932 C
e Xerus_inauris.XerIna_scaffold_48378                        19719 0 -     24430 C
e Vulpes_lagopus.VulLag_flattened_line_30954                  7396 0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5368391 0 -   5488506 C
e Varecia_variegata.k141_1128296                              7155 0 +     24756 C
e Varecia_rubra.k141_590885                                   7107 0 +     50397 C
e Ursus_maritimus.KK499267.1                               4846919 0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_97021                    1918 0 -      4736 C
e Tursiops_truncatus.MRVK01000835.1                       15737687 0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     3208 0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2149617 0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                    670 0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     78963 0 +    610378 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   1853 0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103186 0 +    114563 C
e Tarsius_wallacei.k141_780063                               14959 0 +     25099 C
e Tarsius_lariang.k141_2201908                               10654 0 +     70052 C
e Tapirus_terrestris.TapTer_scaffold_755                    383660 0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      115205 0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 69467 0 +    116680 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                 6822 0 +     41958 C
e Sus_scrofa.CM000828.4                                   62882459 0 -  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629              14217 2 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             27218 0 +     97271 C
e Spermophilus_dauricus.KZ294078.1                         1948224 0 -   3870691 C
e Sorex_araneus.JH798187.1                                13647020 0 -  18376816 C
e Solenodon_paradoxus.SolPar_flattened_line_5840            187690 0 -    191337 C
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    151366 0 -    313613 C
e Saiga_tatarica.SaiTat_scaffold_373180                       3553 0 +      4321 C
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                84669 0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        366918 0 -   3329780 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4900 0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20270299 2 -  38429054 I
e Pteropus_vampyrus.KN534172.1                                1620 0 -      8028 C
e Pteropus_alecto.KB030862.1                              22973683 0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         36676 0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            11207 0 -     21811 C
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Propithecus_verreauxi.k141_956661                            423 0 -      6182 C
e Propithecus_tattersalli.k141_790011                        24178 0 -     67325 C
e Propithecus_perrieri.k141_1200571                            366 0 -     24134 C
e Propithecus_edwardsi.k141_1176054                          22183 0 +     35766 C
e Propithecus_diadema.k141_357118                              825 0 +      4256 C
e Propithecus_coronatus.k141_347390                          24664 0 +     38485 C
e Propithecus_coquerelli.NW_012148875.1                     986375 0 +   2598838 C
e Prolemur_simus.MPIZ01000396.1                            2592414 0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10001 0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           34193 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              439 0 +     22620 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               8487 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     25845 0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25316 22 +     32600 T
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8867 2 -     78924 I
e Pantholops_hodgsonii.KE114653.1                          1264365 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4716988 2 -   8748460 I
e Panthera_pardus.KV860321.1                                259841 2 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  147132 2 +    230217 I
e Ovis_canadensis.OviCan_scaffold_2572                      173432 0 -    191736 C
e Ovis_aries.CM001607.2                                   17585011 0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       458735 0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               6838 12 -     18566 I
e Orcinus_orca.KB316932.1                                  2781440 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144652 0 +    630418 C
e Odobenus_rosmarus.KB229312.1                              500722 0 -   2017862 C
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1355749 0 +   3988456 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744923 0 + 199412804 C
e Nycticebus_coucang.k141_5327727                             2182 0 +      8486 C
e Nycticebus_bengalensis.LG01                            102574496 0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9145981 0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    756389 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5865525 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.KL204047.1                            2025508 0 -   3037898 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186105 0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        32614 0 +     33610 C
e Myotis_lucifugus.GL429869.1                              3902055 0 -   4330536 C
e Myotis_davidii.KB100139.1                                1585846 0 -   6019432 C
e Myotis_brandtii.KE162005.1                                278289 0 -  10118263 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               297665 0 -  14710649 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              2340 0 +     14296 C
e Murina_feae.MurFea_scaffold_85699                           5119 0 +     14753 C
e Mungos_mungo.MunMun_flattened_line_23663                   31348 2 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_61429                  27420 0 -     27816 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 137825 0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    26569 0 -    437263 C
e Mirza_zaza.k141_952172                                      4678 0 -     37649 C
e Mirounga_angustirostris.MirAng_flattened_line_22144        62433 0 -     63350 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             32969 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849093 0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                13419 0 -     19307 C
e Microgale_talazaci.MicTal_scaffold_6613                    15418 9 -    145209 I
e Microcebus_murinus.CM007674.1                           18283324 0 -  93316391 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3064 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365              6234 0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                         6775 0 -    207569 C
e Marmota_marmota.CZRN01000018.1                          33097432 0 -  40650429 C
e Manis_pentadactyla.KN006162.1                              46994 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              15605 0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 87560 0 +     94391 C
e Lycaon_pictus.CM007581.1                                17951720 0 -  59628241 C
e Loxodonta_africana.GL010049.1                            4214513 0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             267474 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3036103 0 +   3914936 C
e Lepilemur_septentrionalis.k141_185316                      22800 0 +     54090 C
e Lepilemur_ruficaudatus.k141_420445                         31656 0 -     32627 C
e Lepilemur_dorsalis.k141_577674                             24745 0 +     45836 C
e Lepilemur_ankaranensis.k141_596936                          6798 0 -     23766 C
e Lemur_catta.scaffold_24                                 15519761 0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12244 0 -     42476 C
e Kogia_breviceps.KogBre_flattened_line_192630                1663 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8271367 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               22396 0 +     23964 C
e Indri_indri.k141_3655594                                   18164 0 +     31101 C
e Ictidomys_tridecemlineatus.JH393364.1                    7514582 0 -   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                      80920 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19846 0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  40612 2 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_29171               39814 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       108373 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112035 0 +    128679 C
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 240 0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20659377 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17480 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               238147 2 +    327341 I
e Hapalemur_occidentalis.k141_907772                          9234 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402 0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298 0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517 0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   30075 0 +     78134 C
e Glis_glis.GliGli_scaffold_19807                            30347 0 +     49224 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_56069               25462 0 +     26054 C
e Galagoides_demidoff.k141_31856                              3208 0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848498 0 +   3816255 C
e Felis_nigripes.FelNig_flattened_line_20823                  5510 2 -     36744 I
e Felis_catus_fca126.CM031415.1                           20191985 2 + 205367284 I
e Eulemur_sanfordi.k141_1122526                               9432 0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267 0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247 0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321 0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369 0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369 0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184 0 -     25546 C
e Eulemur_collaris.k141_377015                                2154 0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453 0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             24792 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           10855 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3325339 0 -   7059049 C
e Equus_przewalskii.KK951119.1                               29586 0 +    498745 C
e Equus_caballus.CM000403.2                               18527571 0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1279750 0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2144065 0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16325770 0 -  41312741 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089003 0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       310280 0 +    607251 C
e Eidolon_helvum.KE759718.1                                   7414 0 +     11740 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 31488 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12014 0 +     14536 C
e Dipodomys_ordii.KN672350.1                              18895804 0 +  37912305 C
e Dinomys_branickii.DinBra_scaffold_21862                    34271 0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    2483 0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  669408 0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8627908 0 +  20541912 C
e Delphinapterus_leucas.KZ290073.1                        16811179 0 +  35494412 C
e Daubentonia_madagascariensis.ctg71                      12532892 0 -  12879189 C
e Dasypus_novemcinctus.JH564415.1                            61065 0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1231 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 2848 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             24230 2 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_287352               365 0 +      4208 C
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          10493 0 -     20389 C
e Condylura_cristata.JH655891.1                           17545984 0 -  53390261 C
e Choloepus_hoffmanni.KN194906.1                            170253 0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15154 0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1248493 0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           12071 0 +     57038 C
e Cheirogaleus_major.k141_333249                             16722 0 -     52598 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            4795 0 -      6351 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2593 0 -      3715 C
e Cephalopachus_bancanus.k141_2037105                         4955 0 -      8605 C
e Cavia_tschudii.CavTsc_scaffold_8919                        98598 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18359723 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18347463 0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     89250 0 +    217609 C
e Castor_canadensis.CasCan_scaffold_2074                    133642 0 +    179628 C
e Carollia_perspicillata.CarPer_scaffold_92756                2877 0 -     11696 C
e Carlito_syrichta.NW_007259797.1                           141039 0 -    496798 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18059996 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18829276 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18496781 0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17955480 0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9031216 0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    181829 0 -    185531 C
e CanFam4.chr16                                           17795772 0 -  60362399 C
e Camelus_ferus.KB017975.1                                  399642 0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2331366 0 -   7040546 C
e Camelus_bactrianus.KN276810.1                            9998902 0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2818451 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18082962 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1124884 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20272324 0 +  48749331 C
e Bison_bison.KN261452.1                                    199119 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    26080 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2009 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15191543 0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              49929 0 +     85213 C
e Avahi_laniger.k141_765380                                  49304 0 -     92717 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  2459 0 +     43469 C
e Arctocebus_calabarensis.k141_288239                        14445 0 +     17124 C
e Aplodontia_rufa.AprRuf_scaffold_68852                       7262 0 +     20879 C
e Antilocapra_americana.AntAmePen_scaffold_12469             97610 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183107 0 +    412891 C
e Ammotragus_lervia.NIVO01071767.1                          675158 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     64987 0 -     89534 C
e Ailurus_fulgens.LNAC01001112.1                             75208 0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9506984 0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           823285 2 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1123  4 +     62944 TG--------------------C--T
s Acinonyx_jubatus.LLWD01001279.1                           823287  2 -   1699592 ----------------------G--T
i Acinonyx_jubatus.LLWD01001279.1                        I 2 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506984 15 -  29979442 -AGAATACAAC-T----C--A-T--T
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             75208 15 -    347723 -AGAATAAAAC-T----C--A-C--T
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64987 15 -     89534 -AAAGTA--TG--A--CCC-A-C--T
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9319  4 -     52922 CA--------------------T--T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9246  4 -     28001 CA--------------------T--T
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9372  4 -      9772 CA--------------------T--T
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            529  4 -     12518 CA--------------------T--T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675158 15 -   2318259 -AGAGTAAAA--T----CC-A-T--T
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183107 15 +    412891 -AGACTAA----TA--CCC-A-T--T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97610 15 -    100397 -AGAGTAAAA--T----CC-A-T--T
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7262 15 +     20879 -AGAGTA---G--AA-CCC-A-T--C
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14445  3 +     17124 -A--------------------T--T
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2459 15 +     43469 -AGACTAA----TACA-C--A-T--T
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  49304  3 -     92717 -A--------------------T--T
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              49929  3 +     85213 -A--------------------T--T
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191543 15 +  23207421 -AGAGTAAAA--T----CC-A-T--T
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2009 15 -     18090 -AGAGTAAAA--T----CC-A-T--T
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26080 15 +     34529 -AGAGTAAAA--T----CC-A-T--T
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    199119 15 -    288883 -AGAGTAAAA--T----CT-G-T--T
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20272324 15 +  48749331 -AGAGTAAAA--T----CT-G-T--T
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1124884 15 -   1948126 -AGAGTAAAA--T----CT-G-T--T
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18082962 15 +  45695690 -AGAGTAAAA--T----CT-G-T--T
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2818451 15 +   4408762 -AGAGTAAAA--T----CC-G-T--T
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998902 15 -  17673402 -AGAGTAAAA--T----CC-A-C--T
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331366 15 -   7040546 -AGAGTAAAA--T----CC-A-C--T
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399642 15 -   1652518 -AGAGTAAAA--T----CC-A-C--T
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795772 15 -  60362399 -AGAGTAAAA---A--TC--A-T--T
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181829 15 -    185531 -AGAGTAAAAC-T----C--A-T--T
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031216 15 -   9314153 -AGAGTAAAA---A--TC--A-T--T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955480 15 -  59632846 -AGAGTAAAAC-T----C--A-T--T
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496781 15 +  63665305 -ACAGTAAAAC-T----C--A-T--T
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18829276 15 +  46296322 -AGAGTAAAA--T----CC-A-T--T
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18059996 15 -  44709034 -AGAGTAAAA--T----CC-A-T--T
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           141039 15 -    496798 -TGAGTA---G--AA-CCC-T-T--T
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2877 15 -     11696 -AGACTAA----TA--TCC-A-C--T
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133642 15 +    179628 -AGGGTA---G--AA-CCC-A-T--T
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89250 15 +    217609 -AG-G-----G-TAAAACCCA-C--T
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18347463 15 -  23392119 -A---TAATAG--AA-CCC-A-T--T
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18359723 15 -  23407841 -A---TAATAG--AA-CCC-A-T--T
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98598 15 +    143979 -AGA--A-----TACAACCCA-T--T
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         4955 15 -      8605 -TGAGTA---G--AA-CCC-T-T--T
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227875 15 +  27778364 -AGAGTCAAA------CCC-A-T--T
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2593 15 -      3715 -AGAGTCAAA------CCC-A-T--T
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470290  4 +   4669795 CA--------------------T--T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8839  4 -     19203 CA--------------------T--T
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3258  4 +      8260 CA--------------------T--T
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3488  4 +     27781 CA--------------------T--T
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3634  4 -     20310 CA--------------------T--T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6618  4 +     29689 CA--------------------T--T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             971  4 +      9989 CA--------------------T--T
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9306  4 -     27936 CA--------------------T--T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9325  4 -     11289 CA--------------------T--T
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811701  4 +  39242232 CA--------------------T--T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217392  4 -  21565898 CA--------------------T--T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34512  4 -     53127 CA--------------------T--T
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1804  4 +      7159 CA--------------------T--T
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9317  4 -     27947 CA--------------------T--T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9293  4 +     17596 CA--------------------T--T
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39787  4 -     41420 CA--------------------T--T
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4795 20 -      6351 -AGAGTAAAAG-TAAAACC-A-C--T
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16722  3 -     52598 -A--------------------T--T
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12071  3 +     57038 -A--------------------T--T
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1248493 15 +   2543920 -AGAGTAAAA--T---TCC---T--T
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18423256  4 -  18827391 CA--------------------T--T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9699  4 -     50209 CA--------------------T--T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416704  4 + 135778131 CA--------------------T--T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15154 20 +     19366 -AGAGTAAAAG-TAAAACC-T-T--T
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170253 20 +    839153 -AGAGTAAAAG-TAAAACC-T-T--T
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1905233  4 +   2368649 CA--------------------T--T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944903  4 + 200372422 CA--------------------T--T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31772  4 +     84244 CA--------------------T--T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545984 14 -  53390261 -AG-GTAA--G----GCCC-A-C--T
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10493 15 -     20389 -AGAGTAACA--CA---C--A-T--T
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24232  2 -     87169 ----------------------G--T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 2 C 0
s Crocidura_indochinensis.CroInd_scaffold_287352               365  1 +      4208 -A------------------------
i Crocidura_indochinensis.CroInd_scaffold_287352         C 0 I 12
s Cuniculus_paca.CunPac_flattened_line_231100                 2848 15 +      5455 -AGAGTA---G--AA-CCC-A-T--T
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1231 15 +      3576 -AGAGTA---G--AA-CCC-A-C--T
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            61065 20 +   2246927 -AGAGTAAA-GCTAAAACC-A-T--T
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532892  3 -  12879189 -A--------------------T--T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811179 15 +  35494412 -AGAGTAAAA--T----CC-A-T--T
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8627908 15 +  20541912 -AGACTAA----T--GCCC-A-T--T
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669408 15 +   1390856 -AGAGTAAAA------CCC-A-T--T
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2483 15 +    198055 -AGAGTCAAA------CCC-A-T--T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34271 15 +     67921 -AGAGTAAAAC-T----CC---T--T
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18895804 15 +  37912305 -AGAGTA---G--AA-CCC-A-T--C
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  12014 15 +     14536 -AGAGTA---G--AA-CCC-A-T--C
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31488 15 -     42551 -AGAATA---G--AA-CCC-A-T--T
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE759718.1                                   7414 15 +     11740 -AGAATAACA--T---TC--A-T--T
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310280 15 +    607251 -AGAGTAAAA--T----CC-A-C--T
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1089003 14 +  10337057 -ACAGT----G--AAA-CT-A-C--T
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16325770 12 -  41312741 -AGA--AAA-C-T----C--A-C--T
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144065 15 -  14770903 -A-A--AA----TAATACCCA-T--T
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279750 15 +   4378816 -AGAGTAAAA------CCC-A-T--T
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527571 15 -  39960074 -AGAGTAAAA------CCC-C-T--T
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29586 15 +    498745 -AGAGTAAAA------CCC-C-T--T
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3325339 15 -   7059049 -AGAGCAAAA---A---CC-A-C--T
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21199935  4 -  21539334 CA--------------------T--T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10855 15 +    133382 -AGAGTAAAA--T----CC-A-T--T
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24792 15 -     44125 -AGAGTAAAA--T----CC-A-T--T
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.AANG03299807.1                                   409  2 -       507 ----------------------G--T
i Felis_catus.AANG03299807.1                             I 2 C 0
s Felis_catus_fca126.CM031415.1                           20191987  2 + 205367284 ----------------------G--T
i Felis_catus_fca126.CM031415.1                          I 2 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  5512  2 -     36744 ----------------------G--T
i Felis_nigripes.FelNig_flattened_line_20823             I 2 C 0
s Fukomys_damarensis.KN121974.1                             848498 15 +   3816255 -AGAGCA---G-CA--TCC-A-C--T
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galagoides_demidoff.k141_31856                              3208  3 -      3432 -a--------------------t--a
i Galagoides_demidoff.k141_31856                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25462 15 +     26054 -AGAATA---G--AAAGC--A-C--T
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30347 15 +     49224 -AGAGTA---G--AA-CCC-A-T--C
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              10564  4 -     32273 CA--------------------T--T
i Gorilla_beringei.k141_3596273                          C 0 T 140
s Gorilla_gorilla.LT578341.1                             186332714  4 + 186649187 CA--------------------T--T
i Gorilla_gorilla.LT578341.1                             C 0 T 140
s Graphiurus_murinus.GraMur_scaffold_10447                   30075 15 +     78134 -AGAGTA---G--AA-CCC-A-T--C
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 T 75
s Helogale_parvula.HelPar_flattened_line_2585               238149  2 +    327341 ----------------------G--T
i Helogale_parvula.HelPar_flattened_line_2585            I 2 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17480 15 +     36099 -AGAGTAAAA--T----CC-A-T--T
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20659377 15 +  22651954 -AGAGTA---G--AACTC--A-T--T
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 240 14 +       961 -ACAGCAAAA--T----CC---T--T
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112035 15 +    128679 -AGAGTAAAA--T----CC-A-T--T
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108373 15 +   1711038 -AGCGT----G--ACACCC-A-T--T
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39814 15 +     43066 -AGCGT----G--ACACCC-A-T--T
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    429263  4 +    630532 TG--------------------C--T
i Hoolock_leuconedys.ctg274                                 T 203 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40614  2 +     55795 ----------------------G--T
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 2 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19846 15 -    143317 -AGAATA---G--AA-TCC-A-T--T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_307679                               12386  4 -     15490 CA--------------------T--T
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              54391  4 +     67168 CA--------------------T--T
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189538043  4 - 191637585 CA--------------------T--T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3330936  4 -  11177569 CA--------------------T--T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80920 15 +    135385 -AGAGTA---G--AAA-CC-A-T--T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514582 15 -   7955117 -AGAGTA---G--AA-CCC-A-T--C
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   18164  3 +     31101 -A--------------------T--T
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22396 15 +     23964 -AGAGTAAAA--T----CC-A-T--T
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271367 15 -   9596543 -AAAGTA---G-GA--TCC-A-C--T
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1663 15 -      3359 -AGAGTAAAA--T----CC-A-T--T
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    12244 15 -     42476 -GGA--A-----TAAAACC-TGT--T
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6798  3 -     23766 -A--------------------T--T
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24745  3 +     45836 -A--------------------T--T
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31656  3 -     32627 -A--------------------T--T
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      22800  3 +     54090 -A--------------------T--T
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3036103 15 +   3914936 -AAAGTAAAAC-T----C--A-T--T
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             267474 15 -    662738 -AGAGTAAAA--T----CC-A-T--T
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1431461  4 +   1826925 CA--------------------T--T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             692  3 +     11245 -A--------------------T--T
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999528  3 +   6120653 -A--------------------T--T
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214513 14 -  43346337 -AGAGTAAAA-------CC-A-T--T
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951720 15 -  59628241 -AGAGTAAAAC-T----C--A-T--T
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               1645  4 +     40492 CA--------------------T--T
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670905  4 +  60120075 CA--------------------T--T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7403  4 -     26193 CA--------------------T--T
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75197  4 -    114318 CA--------------------T--T
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   916  4 -     23192 CA--------------------T--T
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10369  4 -     29190 CA--------------------T--T
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18936  4 +     37952 CA--------------------T--T
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834024  4 + 187317192 CA--------------------T--T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452585  4 -  25927173 CA--------------------T--T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74785  4 +     89720 CA--------------------T--T
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1782  4 +     20474 CA--------------------T--T
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1583  4 -     14993 CA--------------------T--T
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324456  4 -    668171 CA--------------------T--T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15725  4 -     15935 CA--------------------T--T
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20522  4 -     45290 CA--------------------T--T
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87560 15 +     94391 -AGAATAACA--T---TC--A-T--T
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23932077  4 -  24302211 CA--------------------T--T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346255  4 +    752769 CA--------------------T--T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15605 15 +    737560 -AGAGTA-----TAAATGC---T--T
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              46994 15 -    317179 -AGAGTA-----TAAATGC---T--T
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097432 15 -  40650429 -ATAGTA---G--AACTC--A-T--C
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6775 15 -    207569 -AGGGTAA--C-T---CCC-A-T--T
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6234 15 +     13704 -AGAGTAAAAC-T----C--A-T--T
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3064 15 +     10310 -AGATTAAAA--T----CC-A-T--T
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18283324  3 -  93316391 -A--------------------T--T
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13419 15 -     19307 -AGACTA---G-TA--CCC-A-T--T
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849093 15 +   8254450 -AGAGTAACA--T----CC-A-T--T
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32969 15 +     64694 -AGAGTAACA--T----CC-A-T--T
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3812  4 -     28506 CA--------------------T--T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62433 15 -     63350 -AAAGTAAAAC-T----C--A-C--T
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      4678  3 -     37649 -A--------------------T--T
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26569 15 -    437263 -AGAGTAAAA--T----CC-A-T--T
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137825 15 -    366855 -AG-G-----G-TAAAACC-AGT--T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_61429                  27420 13 -     27816 -AG--TAAAA--T---TC--A-T--T
i Moschus_moschiferus.MosMos_scaffold_61429              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31350  2 +     37127 ----------------------G--T
i Mungos_mungo.MunMun_flattened_line_23663               I 2 C 0
s Murina_feae.MurFea_scaffold_85699                           5119 15 +     14753 -GGAATAA----TA--CCC-A-T--T
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2340 15 +     14296 -AGAGTA---G--AA-CCC-A-T--C
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               297665 15 -  14710649 -AGAGTAAAAC-T----C--A-C--T
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                278289 15 -  10118263 -GGAATAA----TA---CCTA-T--T
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585846 15 -   6019432 -GGAATAA----TA---CCTA-T--T
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902055 15 -   4330536 -GGA--ACAA--TA---CCTA-T--T
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32614 15 +     33610 -AGAATAA----TA---CCTA-T--T
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186105 20 +    196477 -ACAATAAAAG-TAAAACC-A-C--T
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025508 15 -   3037898 -AGA--AGA-G--AA-TCC-A-T--T
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                                9825  4 +     21681 CA--------------------T--T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865525 15 +   7148211 -AGAGTAAAA--T----CC-A-T--T
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756389 15 +    783361 -AAAGCAA----TA--CCC-A-T--T
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145981 15 -   9404916 -AGAGTAAAAC-T----C--A-T--T
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102574496  3 - 196305487 -A--------------------T--T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2182  3 +      8486 -A--------------------T--T
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744923  3 + 199412804 -A--------------------T--T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355749 15 +   3988456 -ACAGT----G-GAA-CCC-A-T--T
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              500722 15 -   2017862 -AAAGTAAAAC-T----C--A-T--T
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         144652 15 +    630418 -AGAGTAAAA--T----CC-T-C--T
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  2781440 15 -  10937097 -AGGGTAAAA--T----CC-A-T--T
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6850  2 -     18566 ----------------------T--A
i Orycteropus_afer.OryAfe_flattened_line_144387          I 12 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458735 15 -    559221 -AGAGTAAAAC-T----C--A-T--T
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17585011 15 +  44047080 -AGAGTAAAA--T----CC-A-T--T
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173432 15 -    191736 -AGAGTAAAA--T----CC-A-T--T
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    36208  4 +     80009 tg--------------------c--t
i Pan_paniscus.KQ411613.1                                T 2335 I 2404
s Pan_troglodytes.CM009242.2                             189137577  4 + 189151597 ca--------------------t--t
i Pan_troglodytes.CM009242.2                             C 0 T 209
s Panthera_onca.PanOnc_flattened_line_3271                  147134  2 +    230217 ----------------------G--T
i Panthera_onca.PanOnc_flattened_line_3271               I 2 C 0
s Panthera_pardus.KV860321.1                                259843  2 +  18783137 ----------------------G--T
i Panthera_pardus.KV860321.1                             I 2 C 0
s Panthera_tigris.KE722367.1                               4716990  2 -   8748460 ----------------------G--T
i Panthera_tigris.KE722367.1                             I 2 C 0
s Pantholops_hodgsonii.KE114653.1                          1264365 15 -   2937107 -AGAGTAAAA--T----CC-A-T--T
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183437399  4 + 183742232 CA--------------------T--T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1557  4 +     20448 CA--------------------T--T
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20558083  4 +  20919399 CA--------------------T--T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                    300  4 +     41871 CA--------------------T--T
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     3586  4 +     27711 CA--------------------T--T
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  3485  4 +      9205 CA--------------------T--T
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8869  2 -     78924 ----------------------G--T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 2 C 0
s Perodicticus_ibeanus.k141_855320                            4678  3 +     13100 -C--------------------T--T
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             3046  3 +     25941 -C--------------------T--T
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25845 14 -     29689 -AGAGTA---G--AA--CT-A-G--T
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8487 15 +     63832 -AGAGTAAAA--T----CC-A-T--T
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38341  4 +     62158 CA--------------------T--T
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33068  4 +     89929 CA--------------------T--T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34484  4 +     51399 CA--------------------T--T
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290705  4 -  14605196 CA--------------------T--T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              439 15 +     22620 -AGA-TAAA---TA--CCC-A-T--T
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34193 15 +     35617 -AGAGTAAAA--T----CC-A-T--T
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189125758  4 + 189387572 CA--------------------T--T
i Pongo_abelii.CM009266.2                                C 0 T 205
s Pongo_pygmaeus.ctg66                                     9565362  4 +   9816681 CA--------------------T--T
i Pongo_pygmaeus.ctg66                                   C 0 T 206
s Presbytis_comata.k141_677006                               67985  4 -     81375 CA--------------------T--T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9812  4 +     10147 CA--------------------T--T
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 10001 14 -     22811 -ACAGCAAAA-------CC-C-T--T
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986375  3 +   2598838 -A--------------------T--T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          24664  3 +     38485 -A--------------------T--T
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                              825  3 +      4256 -A--------------------T--T
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22183  3 +     35766 -A--------------------T--T
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            366  3 -     24134 -A--------------------T--T
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24178  3 -     67325 -A--------------------T--T
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            423  3 -      6182 -A--------------------T--T
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11207 20 -     21811 -AGACTA-TCC-TAATACCCA-T--T
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36676 15 +     42204 -AGAGTAAAAC-T----C--A-C--T
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973683 15 +  28871421 -AGAATAACA--T----CC-A-T--T
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1620 15 -      8028 -AGAATAACA--T----CC-A-T--T
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20270301  2 -  38429054 ----------------------G--T
i Puma_concolor.QAVW01001104.1                           I 2 C 0
s Pygathrix_cinerea.k141_1153803                              9814  4 -     91421 CA--------------------T--T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603948  4 +   7812017 CA--------------------T--T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9787  4 -     72585 CA--------------------T--T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4900 15 +     55207 -AGAGTAAAA--T----CC-T-C--T
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        366918 15 -   3329780 -AGCGTAACA------CCC-A-T--T
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             1500  4 -     11128 ca--------------------t--t
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230857  4 - 195417433 ca--------------------t--t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7666505  4 +   7961872 ca--------------------t--t
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84669 15 -     96226 -AGAATAACA--T---TC--A-T--T
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3553 15 +      4321 -AGAGTAAAA--T----CC-A-T--T
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151366 14 -    313613 -AG-GTAAA-G-----CCC-A-T--T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          14329  4 -     19888 CA--------------------T--T
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21534  4 +     39453 CA--------------------T--T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2058  4 +     27826 CA--------------------T--T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1580  4 -     19483 CA--------------------T--T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1642  4 +      7198 CA--------------------T--T
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9902  4 +     15514 CA--------------------T--T
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187690 15 -    191337 -AGAGTAAAA------CCC-C-T--T
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13647020 15 -  18376816 -AGA--A-----TAAAACC-TGG--T
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1948224 15 -   3870691 -AGAGTA---G--AA-CCC-A-T--C
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27218 15 +     97271 -ACAGTAAAAC-T----C--A-C--T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14219  2 -    196729 ----------------------G--T
i Suricata_suricatta.SurSur_flattened_line_6629          I 2 C 0
s Sus_scrofa.CM000828.4                                   62882459 15 -  69701581 -AGAGTAAAA------CCC-A-T--T
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1088084  4 -   1523678 CA--------------------T--T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6822 15 +     41958 -AGAGTAA----TA--CCC-A-T--T
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69467 20 +    116680 -ACGGTAAAAG-TAAAACC-A-T--T
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115205 15 -    156842 -AAAGTAAAAC-T----C--A-T--T
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383660 15 +    539355 -A-A--A---G-TAAAACCCA-T--T
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10654 15 +     70052 -TGAGTA---G--AA-CCC-T-T--T
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               14959 15 +     25099 -TGAGTA---G--AA-CCC-T-T--T
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422908  4 + 186847797 CA--------------------T--T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103186 15 +    114563 -ACAGT------TAAAGCC-A-A--T
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   1853 20 +      8208 -AGAGTAAAAG-TAAAACC-A-T--T
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78963 15 +    610378 -AGACTAA--G--A--CCC-A-T--T
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          5636  4 -     20410 CA--------------------T--T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9831  4 +     15221 CA--------------------T--T
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5736  4 +     19930 CA--------------------T--T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2166  4 -     19997 CA--------------------T--T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42285  4 -     60166 CA--------------------T--T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9757  4 -     27529 CA--------------------T--T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9697  4 -     18194 CA--------------------T--T
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3433  4 -     21137 CA--------------------T--T
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2135  4 -     10723 CA--------------------T--T
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1288  4 +      9834 CA--------------------T--T
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19606  4 +     32220 CA--------------------T--T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933703  4 +   6242583 CA--------------------T--T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2948  4 +     20839 CA--------------------T--T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    670 15 -      1748 -AGAATAAAA--T---TC--A-T--T
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 C 0
s Tupaia_chinensis.KB320699.1                              2149617 14 +   4065304 -AGAGTA---G--A--CCC-A-C--T
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     3208 14 -     10553 -AGAGTA---G--A--CCC-A-C--T
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737687 15 +  33153633 -AGAGTAAAA--T----CC-A-T--T
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_97021                    1918 15 -      4736 -A-AGGAAAAG-T----CC-A-T--G
i Uropsilus_gracilis.UroGra_scaffold_97021               C 0 C 0
s Ursus_maritimus.KK499267.1                               4846919 15 -   5085361 -AGAGTACAAC-T----C--A-T--T
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368391 15 -   5488506 -AGAGTAAAA--T----CC-A-C--T
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7396 15 -     43706 -AGAGTAAAAC-T----C--A-T--T
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19719 15 -     24430 -AGAGTA---G--AA-CCC-A-T--C
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1844 15 +      2932 -AAAGTAAAAC-T----C--A-T--T
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      10001 14 +     63895 -AAAGTA---G-GA---CC-A-C--T
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11379 15 +     12536 -AGATTAAAA--T----CC-A-T--T
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25316 22 +     32600 T
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    15418  9 -    145209 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1127 2 +     62944 AT
s Gorilla_beringei.k141_3596273                              10428 2 -     32273 AT
i Gorilla_beringei.k141_3596273                          T 140 I 138
s Gorilla_gorilla.LT578341.1                             186332578 2 + 186649187 AT
i Gorilla_gorilla.LT578341.1                             T 140 I 138
s Pan_paniscus.KQ411613.1                                    38616 2 +     80009 at
i Pan_paniscus.KQ411613.1                                I 2404 T 2406
s Pan_troglodytes.CM009242.2                             189137372 2 + 189151597 at
i Pan_troglodytes.CM009242.2                             T 209 I 207
s Pongo_abelii.CM009266.2                                189125557 2 + 189387572 AT
i Pongo_abelii.CM009266.2                                T 205 I 203
s Pongo_pygmaeus.ctg66                                     9565160 2 +   9816681 AT
i Pongo_pygmaeus.ctg66                                   T 206 I 204
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Loris_tardigradus.ctg83                                   999531 0 +   6120653 C
e Loris_lydekkerianus.k141_2539221                             695 0 +     11245 C
e Perodicticus_potto.k141_1092580                             3049 0 +     25941 C
e Perodicticus_ibeanus.k141_855320                            4681 0 +     13100 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            11394 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      10015 0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_63728          1859 0 +      2932 C
e Xerus_inauris.XerIna_scaffold_48378                        19734 0 -     24430 C
e Vulpes_lagopus.VulLag_flattened_line_30954                  7411 0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5368406 0 -   5488506 C
e Varecia_variegata.k141_1128296                              7155 0 +     24756 C
e Varecia_rubra.k141_590885                                   7107 0 +     50397 C
e Ursus_maritimus.KK499267.1                               4846934 0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_97021                    1933 0 -      4736 C
e Tursiops_truncatus.MRVK01000835.1                       15737702 0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     3222 0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2149631 0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                    685 0 -      1748 C
e Trachypithecus_pileatus.k141_2007326                        2952 0 +     20839 C
e Trachypithecus_phayrei.ctg124                            5933707 0 +   6242583 C
e Trachypithecus_obscurus.k141_190785                        19610 0 +     32220 C
e Trachypithecus_melamera.k141_434728                         1292 0 +      9834 C
e Trachypithecus_leucocephalus.k141_587342                    2139 0 -     10723 C
e Trachypithecus_laotum.k141_907409                           3437 0 -     21137 C
e Trachypithecus_hatinhensis.k141_143409                      9701 0 -     18194 C
e Trachypithecus_germaini.k141_912491                         9761 0 -     27529 C
e Trachypithecus_geei.k141_277701                            42289 0 -     60166 C
e Trachypithecus_francoisi.k141_1412647                       2170 0 -     19997 C
e Trachypithecus_cristatus.k141_580354                        5740 0 +     19930 C
e Trachypithecus_crepusculus.k141_1194022                     9835 0 +     15221 C
e Trachypithecus_auratus.k141_722599                          5640 0 -     20410 C
e Tonatia_saurophila.TonSau_scaffold_294                     78978 0 +    610378 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   1873 0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103201 0 +    114563 C
e Theropithecus_gelada.CM009954.1                        186422912 0 + 186847797 C
e Tarsius_wallacei.k141_780063                               14974 0 +     25099 C
e Tarsius_lariang.k141_2201908                               10669 0 +     70052 C
e Tapirus_terrestris.TapTer_scaffold_755                    383675 0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      115220 0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 69487 0 +    116680 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                 6837 0 +     41958 C
e Symphalangus_syndactylus.tarseq_199                      1088088 0 -   1523678 C
e Sus_scrofa.CM000828.4                                   62882474 0 -  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629              14221 0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             27233 0 +     97271 C
e Spermophilus_dauricus.KZ294078.1                         1948239 0 -   3870691 C
e Sorex_araneus.JH798187.1                                13647035 0 -  18376816 C
e Solenodon_paradoxus.SolPar_flattened_line_5840            187705 0 -    191337 C
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Semnopithecus_vetulus.k141_1200928                          9906 0 +     15514 C
e Semnopithecus_schistaceus.k141_1584426                      1646 0 +      7198 C
e Semnopithecus_priam.k141_638794                             1584 0 -     19483 C
e Semnopithecus_johnii.k141_670120                            2062 0 +     27826 C
e Semnopithecus_hypoleucos.k141_1615806                      21538 0 +     39453 C
e Semnopithecus_entellus.k141_11662                          14333 0 -     19888 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    151380 0 -    313613 C
e Saiga_tatarica.SaiTat_scaffold_373180                       3568 0 +      4321 C
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                84684 0 -     96226 C
e Rhinopithecus_strykeri.ctg102                            7666509 0 +   7961872 C
e Rhinopithecus_roxellana.NC_044550.1                     91230861 0 - 195417433 C
e Rhinopithecus_bieti.k119_217274                             1504 0 -     11128 C
e Rhinolophus_sinicus.LVEH01000134.1                        366933 0 -   3329780 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4915 0 +     55207 C
e Pygathrix_nigripes_a.k141_215492                              9791 0 -     72585 C
e Pygathrix_nigripes_b.ctg100                                 7603952 0 +   7812017 C
e Pygathrix_cinerea.k141_1153803                              9818 0 -     91421 C
e Puma_concolor.QAVW01001104.1                            20270303 0 -  38429054 C
e Pteropus_vampyrus.KN534172.1                                1635 0 -      8028 C
e Pteropus_alecto.KB030862.1                              22973698 0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         36691 0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            11227 0 -     21811 C
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Propithecus_verreauxi.k141_956661                            426 0 -      6182 C
e Propithecus_tattersalli.k141_790011                        24181 0 -     67325 C
e Propithecus_perrieri.k141_1200571                            369 0 -     24134 C
e Propithecus_edwardsi.k141_1176054                          22186 0 +     35766 C
e Propithecus_diadema.k141_357118                              828 0 +      4256 C
e Propithecus_coronatus.k141_347390                          24667 0 +     38485 C
e Propithecus_coquerelli.NW_012148875.1                     986378 0 +   2598838 C
e Prolemur_simus.MPIZ01000396.1                            2592414 0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10015 0 -     22811 C
e Presbytis_mitrata.k141_2342859                              9816 0 +     10147 C
e Presbytis_comata.k141_677006                               67989 0 -     81375 C
e Platanista_gangetica.PlaMin_flattened_line_32310           34208 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              454 0 +     22620 C
e Piliocolobus_tephrosceles.PDMG02000141.1                14290709 0 -  14605196 C
e Piliocolobus_kirkii.k141_448987                            34488 0 +     51399 C
e Piliocolobus_gordonorum.k141_381342                        33072 0 +     89929 C
e Piliocolobus_badius.k141_1234363                           38345 0 +     62158 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               8502 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     25859 0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25316 22 +     32600 T
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8871 0 -     78924 C
e Papio_ursinus.k141_3428135                                  3489 0 +      9205 C
e Papio_papio.k141_802527                                     3590 0 +     27711 C
e Papio_kindae.k141_1936966                                    304 0 +     41871 C
e Papio_hamadryas.Contig39                                20558087 0 +  20919399 C
e Papio_cynocephalus.k141_4307930                             1561 0 +     20448 C
e Papio_anubis.CM001495.2                                183437403 0 + 183742232 C
e Pantholops_hodgsonii.KE114653.1                          1264380 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4716992 0 -   8748460 C
e Panthera_pardus.KV860321.1                                259845 0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  147136 0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      173447 0 -    191736 C
e Ovis_aries.CM001607.2                                   17585026 0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       458750 0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               6852 0 -     18566 C
e Orcinus_orca.KB316932.1                                  2781455 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144667 0 +    630418 C
e Odobenus_rosmarus.KB229312.1                              500737 0 -   2017862 C
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1355764 0 +   3988456 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744926 0 + 199412804 C
e Nycticebus_coucang.k141_5327727                             2185 0 +      8486 C
e Nycticebus_bengalensis.LG01                            102574499 0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9145996 0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    756404 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5865540 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nasalis_larvatus.k141_413338                                9829 0 +     21681 C
e Nannospalax_galili.KL204047.1                            2025523 0 -   3037898 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186125 0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        32629 0 +     33610 C
e Myotis_lucifugus.GL429869.1                              3902070 0 -   4330536 C
e Myotis_davidii.KB100139.1                                1585861 0 -   6019432 C
e Myotis_brandtii.KE162005.1                                278304 0 -  10118263 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               297680 0 -  14710649 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              2355 0 +     14296 C
e Murina_feae.MurFea_scaffold_85699                           5134 0 +     14753 C
e Mungos_mungo.MunMun_flattened_line_23663                   31352 0 +     37127 C
e Moschus_moschiferus.MosMos_scaffold_61429                  27433 0 -     27816 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 137840 0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    26584 0 -    437263 C
e Mirza_zaza.k141_952172                                      4681 0 -     37649 C
e Mirounga_angustirostris.MirAng_flattened_line_22144        62448 0 -     63350 C
e Miopithecus_ogouensis.k141_534055                           3816 0 -     28506 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             32984 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849108 0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                13434 0 -     19307 C
e Microgale_talazaci.MicTal_scaffold_6613                    15418 9 -    145209 I
e Microcebus_murinus.CM007674.1                           18283327 0 -  93316391 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3079 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365              6249 0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                         6790 0 -    207569 C
e Marmota_marmota.CZRN01000018.1                          33097447 0 -  40650429 C
e Manis_pentadactyla.KN006162.1                              47009 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              15620 0 +    737560 C
e Mandrillus_sphinx.Contig270                               346259 0 +    752769 C
e Mandrillus_leucophaeus.scaffold280                      23932081 0 -  24302211 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 87575 0 +     94391 C
e Macaca_tonkeana.k141_1498238                               20526 0 -     45290 C
e Macaca_thibetana.k99_7456                                  15729 0 -     15935 C
e Macaca_silenus.Contig273                                  324460 0 -    668171 C
e Macaca_siberu.k141_635500                                   1587 0 -     14993 C
e Macaca_radiata.k141_3680011                                 1786 0 +     20474 C
e Macaca_nigra.k141_1655396                                  74789 0 +     89720 C
e Macaca_nemestrina.KQ007038.1                            25452589 0 -  25927173 C
e Macaca_mulatta.NC_041758.1                             186834028 0 + 187317192 C
e Macaca_maura.k141_2733130                                  18940 0 +     37952 C
e Macaca_leonina.k141_3550399                                10373 0 -     29190 C
e Macaca_fuscata.k119_255327                                   920 0 -     23192 C
e Macaca_fascicularis.k141_814140                            75201 0 -    114318 C
e Macaca_cyclopis.k119_18836                                  7407 0 -     26193 C
e Macaca_assamensis.Contig5                               59670909 0 +  60120075 C
e Macaca_arctoides.k141_2326796                               1649 0 +     40492 C
e Lycaon_pictus.CM007581.1                                17951735 0 -  59628241 C
e Loxodonta_africana.GL010049.1                            4214527 0 -  43346337 C
e Lophocebus_aterrimus.ctg367                              1431465 0 +   1826925 C
e Lipotes_vexillifer.KE559953.1                             267489 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3036118 0 +   3914936 C
e Lepilemur_septentrionalis.k141_185316                      22803 0 +     54090 C
e Lepilemur_ruficaudatus.k141_420445                         31659 0 -     32627 C
e Lepilemur_dorsalis.k141_577674                             24748 0 +     45836 C
e Lepilemur_ankaranensis.k141_596936                          6801 0 -     23766 C
e Lemur_catta.scaffold_24                                 15519761 0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12259 0 -     42476 C
e Kogia_breviceps.KogBre_flattened_line_192630                1678 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8271382 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               22411 0 +     23964 C
e Indri_indri.k141_3655594                                   18167 0 +     31101 C
e Ictidomys_tridecemlineatus.JH393364.1                    7514597 0 -   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                      80935 0 +    135385 C
e Hylobates_pileatus_a.tarseq_633                            3330940 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189538047 0 - 191637585 C
e Hylobates_klossii.k141_282416                              54395 0 +     67168 C
e Hylobates_agilis.k141_307679                               12390 0 -     15490 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19861 0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  40616 0 +     55795 C
e Hoolock_leuconedys.ctg274                                    429267 0 +    630532 C
e Hipposideros_galeritus.HipGal_scaffold_29171               39829 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       108388 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112050 0 +    128679 C
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 254 0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20659392 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17495 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               238151 0 +    327341 C
e Hapalemur_occidentalis.k141_907772                          9234 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402 0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298 0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517 0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   30090 75 +     78134 T
e Glis_glis.GliGli_scaffold_19807                            30362 0 +     49224 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_56069               25477 0 +     26054 C
e Galagoides_demidoff.k141_31856                              3211 0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848513 0 +   3816255 C
e Felis_nigripes.FelNig_flattened_line_20823                  5514 0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20191989 0 + 205367284 C
e Eulemur_sanfordi.k141_1122526                               9432 0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267 0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247 0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321 0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369 0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369 0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184 0 -     25546 C
e Eulemur_collaris.k141_377015                                2154 0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453 0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             24807 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           10870 0 +    133382 C
e Erythrocebus_patas.Contig38                             21199939 0 -  21539334 C
e Erinaceus_europaeus.JH835339.1                           3325354 0 -   7059049 C
e Equus_przewalskii.KK951119.1                               29601 0 +    498745 C
e Equus_caballus.CM000403.2                               18527586 0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1279765 0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2144080 0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16325782 0 -  41312741 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089017 0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       310295 0 +    607251 C
e Eidolon_helvum.KE759718.1                                   7429 0 +     11740 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 31503 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12029 0 +     14536 C
e Dipodomys_ordii.KN672350.1                              18895819 0 +  37912305 C
e Dinomys_branickii.DinBra_scaffold_21862                    34286 0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    2498 0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  669423 0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8627923 0 +  20541912 C
e Delphinapterus_leucas.KZ290073.1                        16811194 0 +  35494412 C
e Daubentonia_madagascariensis.ctg71                      12532895 0 -  12879189 C
e Dasypus_novemcinctus.JH564415.1                            61085 0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1246 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 2863 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             24234 0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_287352               366 12 +      4208 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          10508 0 -     20389 C
e Condylura_cristata.JH655891.1                           17545998 0 -  53390261 C
e Colobus_polykomos.k141_906115                              31776 0 +     84244 C
e Colobus_guereza.LG01                                   199944907 0 + 200372422 C
e Colobus_angolensis.KN981557.1                            1905237 0 +   2368649 C
e Choloepus_hoffmanni.KN194906.1                            170273 0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15174 0 +     19366 C
e Chlorocebus_sabaeus.CM001947.1                         135416708 0 + 135778131 C
e Chlorocebus_pygerythrus.k141_1025673                        9703 0 -     50209 C
e Chlorocebus_aethiops.ctg25                              18423260 0 -  18827391 C
e Chinchilla_lanigera.JH722012.1                           1248508 0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           12074 0 +     57038 C
e Cheirogaleus_major.k141_333249                             16725 0 -     52598 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            4815 0 -      6351 C
e Cercopithecus_roloway.k141_3180641                         39791 0 -     41420 C
e Cercopithecus_pogonias.k141_822820                          9297 0 +     17596 C
e Cercopithecus_petaurista.k141_807961                        9321 0 -     27947 C
e Cercopithecus_nictitans.k141_3278028                        1808 0 +      7159 C
e Cercopithecus_neglectus.k141_2526306                       34516 0 -     53127 C
e Cercopithecus_mona.ctg39                                21217396 0 -  21565898 C
e Cercopithecus_albogularis.ctg5                                38811705 0 +  39242232 C
e Cercopithecus_lowei.k141_457449                             9329 0 -     11289 C
e Cercopithecus_hamlyni.k141_187466                           9310 0 -     27936 C
e Cercopithecus_diana.k141_2427854                             975 0 +      9989 C
e Cercopithecus_cephus.k141_1078548                           6622 0 +     29689 C
e Cercopithecus_ascanius.k141_1024104                         3638 0 -     20310 C
e Cercocebus_torquatus.k141_3057011                           3492 0 +     27781 C
e Cercocebus_lunulatus.k141_3846941                           3262 0 +      8260 C
e Cercocebus_chrysogaster.k141_393940                         8843 0 -     19203 C
e Cercocebus_atys.KQ010504.1                               4470294 0 +   4669795 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2608 0 -      3715 C
e Cephalopachus_bancanus.k141_2037105                         4970 0 -      8605 C
e Cavia_tschudii.CavTsc_scaffold_8919                        98613 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18359738 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18347478 0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     89265 0 +    217609 C
e Castor_canadensis.CasCan_scaffold_2074                    133657 0 +    179628 C
e Carollia_perspicillata.CarPer_scaffold_92756                2892 0 -     11696 C
e Carlito_syrichta.NW_007259797.1                           141054 0 -    496798 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18060011 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18829291 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18496796 0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17955495 0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9031231 0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    181844 0 -    185531 C
e CanFam4.chr16                                           17795787 0 -  60362399 C
e Camelus_ferus.KB017975.1                                  399657 0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2331381 0 -   7040546 C
e Camelus_bactrianus.KN276810.1                            9998917 0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2818466 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18082977 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1124899 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20272339 0 +  48749331 C
e Bison_bison.KN261452.1                                    199134 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    26095 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2024 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15191558 0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              49932 0 +     85213 C
e Avahi_laniger.k141_765380                                  49307 0 -     92717 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  2474 0 +     43469 C
e Arctocebus_calabarensis.k141_288239                        14448 0 +     17124 C
e Aplodontia_rufa.AprRuf_scaffold_68852                       7277 0 +     20879 C
e Antilocapra_americana.AntAmePen_scaffold_12469             97625 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183122 0 +    412891 C
e Ammotragus_lervia.NIVO01071767.1                          675173 0 -   2318259 C
e Allochrocebus_solatus.k141_166128                            533 0 -     12518 C
e Allochrocebus_preussi.k141_310680                           9376 0 -      9772 C
e Allochrocebus_lhoesti.k141_4309873                          9250 0 -     28001 C
e Allenopithecus_nigroviridis.k141_3361533                    9323 0 -     52922 C
e Allactaga_bullata.AllBul_scaffold_9566                     65002 0 -     89534 C
e Ailurus_fulgens.LNAC01001112.1                             75223 0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9506999 0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           823289 0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       1129 1 +     62944 G
s Acinonyx_jubatus.LLWD01001279.1                           823289 1 -   1699592 G
i Acinonyx_jubatus.LLWD01001279.1                        C 0 T 65
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506999 1 -  29979442 G
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 T 83
s Ailurus_fulgens.LNAC01001112.1                             75223 1 -    347723 G
i Ailurus_fulgens.LNAC01001112.1                         C 0 T 84
s Allactaga_bullata.AllBul_scaffold_9566                     65002 1 -     89534 G
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 T 87
s Allenopithecus_nigroviridis.k141_3361533                    9323 1 -     52922 G
i Allenopithecus_nigroviridis.k141_3361533               C 0 T 77
s Allochrocebus_lhoesti.k141_4309873                          9250 1 -     28001 G
i Allochrocebus_lhoesti.k141_4309873                     C 0 T 77
s Allochrocebus_preussi.k141_310680                           9376 1 -      9772 G
i Allochrocebus_preussi.k141_310680                      C 0 T 77
s Allochrocebus_solatus.k141_166128                            533 1 -     12518 G
i Allochrocebus_solatus.k141_166128                      C 0 T 77
s Ammotragus_lervia.NIVO01071767.1                          675173 1 -   2318259 G
i Ammotragus_lervia.NIVO01071767.1                       C 0 T 83
s Anoura_caudifer.AnoCau_scaffold_1412                      183122 1 +    412891 G
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 T 83
s Antilocapra_americana.AntAmePen_scaffold_12469             97625 1 -    100397 A
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 T 83
s Aplodontia_rufa.AprRuf_scaffold_68852                       7277 1 +     20879 A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 T 78
s Arctocebus_calabarensis.k141_288239                        14448 1 +     17124 A
i Arctocebus_calabarensis.k141_288239                    C 0 T 70
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2474 1 +     43469 G
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 T 83
s Avahi_laniger.k141_765380                                  49307 1 -     92717 G
i Avahi_laniger.k141_765380                              C 0 T 67
s Avahi_peyrierasi.k141_1424874                              49932 1 +     85213 G
i Avahi_peyrierasi.k141_1424874                          C 0 T 67
s Balaenoptera_acutorostrata.KI537508.1                   15191558 1 +  23207421 G
i Balaenoptera_acutorostrata.KI537508.1                  C 0 T 83
s Balaenoptera_bonaerensis.DF707048.1                         2024 1 -     18090 G
i Balaenoptera_bonaerensis.DF707048.1                    C 0 T 83
s Beatragus_hunteri.BeaHun_scaffold_50177                    26095 1 +     34529 G
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 T 83
s Bison_bison.KN261452.1                                    199134 1 -    288883 G
i Bison_bison.KN261452.1                                 C 0 T 83
s Bos_indicus.CM003047.1                                  20272339 1 +  48749331 G
i Bos_indicus.CM003047.1                                 C 0 T 83
s Bos_mutus.JH880303.1                                     1124899 1 -   1948126 G
i Bos_mutus.JH880303.1                                   C 0 T 83
s Bos_taurus.CM000203.6                                   18082977 1 +  45695690 G
i Bos_taurus.CM000203.6                                  C 0 T 83
s Bubalus_bubalis.KI419123.1                               2818466 1 +   4408762 G
i Bubalus_bubalis.KI419123.1                             C 0 T 83
s Camelus_bactrianus.KN276810.1                            9998917 1 -  17673402 G
i Camelus_bactrianus.KN276810.1                          C 0 T 83
s Camelus_dromedarius.KN272107.1                           2331381 1 -   7040546 G
i Camelus_dromedarius.KN272107.1                         C 0 T 83
s Camelus_ferus.KB017975.1                                  399657 1 -   1652518 G
i Camelus_ferus.KB017975.1                               C 0 T 83
s CanFam4.chr16                                           17795787 1 -  60362399 G
i CanFam4.chr16                                          C 0 T 84
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181844 1 -    185531 G
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 T 84
s Canis_lupus_dingo.QKWQ01000480.1                         9031231 1 -   9314153 G
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 T 84
s Canis_lupus_familiaris.chr16                            17955495 1 -  59632846 G
i Canis_lupus_familiaris.chr16                           C 0 T 84
s Canis_lupus_orion.HG994398.1                            18496796 1 +  63665305 G
i Canis_lupus_orion.HG994398.1                           C 0 T 84
s Capra_aegagrus.CM003241.1                               18829291 1 +  46296322 G
i Capra_aegagrus.CM003241.1                              C 0 T 83
s Capra_hircus.CM004588.1                                 18060011 1 -  44709034 G
i Capra_hircus.CM004588.1                                C 0 T 83
s Carlito_syrichta.NW_007259797.1                           141054 1 -    496798 G
i Carlito_syrichta.NW_007259797.1                        C 0 T 83
s Carollia_perspicillata.CarPer_scaffold_92756                2892 1 -     11696 G
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 T 83
s Castor_canadensis.CasCan_scaffold_2074                    133657 1 +    179628 G
i Castor_canadensis.CasCan_scaffold_2074                 C 0 T 80
s Catagonus_wagneri.CatWag_scaffold_2839                     89265 1 +    217609 G
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 T 124
s Cavia_aperea.AVPZ01000300.1                             18347478 1 -  23392119 G
i Cavia_aperea.AVPZ01000300.1                            C 0 T 82
s Cavia_porcellus.DS562891.1                              18359738 1 -  23407841 G
i Cavia_porcellus.DS562891.1                             C 0 T 82
s Cavia_tschudii.CavTsc_scaffold_8919                        98613 1 +    143979 G
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 T 82
s Cephalopachus_bancanus.k141_2037105                         4970 1 -      8605 G
i Cephalopachus_bancanus.k141_2037105                    C 0 T 83
s Ceratotherium_simum.JH767749.1                          12227890 1 +  27778364 G
i Ceratotherium_simum.JH767749.1                         C 0 T 83
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2608 1 -      3715 G
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 T 83
s Cercocebus_atys.KQ010504.1                               4470294 1 +   4669795 G
i Cercocebus_atys.KQ010504.1                             C 0 T 77
s Cercocebus_chrysogaster.k141_393940                         8843 1 -     19203 G
i Cercocebus_chrysogaster.k141_393940                    C 0 T 77
s Cercocebus_lunulatus.k141_3846941                           3262 1 +      8260 G
i Cercocebus_lunulatus.k141_3846941                      C 0 T 77
s Cercocebus_torquatus.k141_3057011                           3492 1 +     27781 G
i Cercocebus_torquatus.k141_3057011                      C 0 T 77
s Cercopithecus_ascanius.k141_1024104                         3638 1 -     20310 G
i Cercopithecus_ascanius.k141_1024104                    C 0 T 77
s Cercopithecus_cephus.k141_1078548                           6622 1 +     29689 G
i Cercopithecus_cephus.k141_1078548                      C 0 T 77
s Cercopithecus_diana.k141_2427854                             975 1 +      9989 G
i Cercopithecus_diana.k141_2427854                       C 0 T 77
s Cercopithecus_hamlyni.k141_187466                           9310 1 -     27936 G
i Cercopithecus_hamlyni.k141_187466                      C 0 T 77
s Cercopithecus_lowei.k141_457449                             9329 1 -     11289 G
i Cercopithecus_lowei.k141_457449                        C 0 T 77
s Cercopithecus_albogularis.ctg5                                38811705 1 +  39242232 G
i Cercopithecus_albogularis.ctg5                               C 0 T 77
s Cercopithecus_mona.ctg39                                21217396 1 -  21565898 G
i Cercopithecus_mona.ctg39                               C 0 T 77
s Cercopithecus_neglectus.k141_2526306                       34516 1 -     53127 G
i Cercopithecus_neglectus.k141_2526306                   C 0 T 77
s Cercopithecus_nictitans.k141_3278028                        1808 1 +      7159 G
i Cercopithecus_nictitans.k141_3278028                   C 0 T 77
s Cercopithecus_petaurista.k141_807961                        9321 1 -     27947 G
i Cercopithecus_petaurista.k141_807961                   C 0 T 77
s Cercopithecus_pogonias.k141_822820                          9297 1 +     17596 G
i Cercopithecus_pogonias.k141_822820                     C 0 T 77
s Cercopithecus_roloway.k141_3180641                         39791 1 -     41420 G
i Cercopithecus_roloway.k141_3180641                     C 0 T 77
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4815 1 -      6351 G
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 T 68
s Cheirogaleus_major.k141_333249                             16725 1 -     52598 G
i Cheirogaleus_major.k141_333249                         C 0 T 66
s Cheirogaleus_medius.k141_1055463                           12074 1 +     57038 G
i Cheirogaleus_medius.k141_1055463                       C 0 T 66
s Chinchilla_lanigera.JH722012.1                           1248508 1 +   2543920 G
i Chinchilla_lanigera.JH722012.1                         C 0 T 80
s Chlorocebus_aethiops.ctg25                              18423260 1 -  18827391 G
i Chlorocebus_aethiops.ctg25                             C 0 T 77
s Chlorocebus_pygerythrus.k141_1025673                        9703 1 -     50209 G
i Chlorocebus_pygerythrus.k141_1025673                   C 0 T 77
s Chlorocebus_sabaeus.CM001947.1                         135416708 1 + 135778131 G
i Chlorocebus_sabaeus.CM001947.1                         C 0 T 77
s Choloepus_didactylus.ChoDid_scaffold_45914                 15174 1 +     19366 G
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 T 87
s Choloepus_hoffmanni.KN194906.1                            170273 1 +    839153 G
i Choloepus_hoffmanni.KN194906.1                         C 0 T 87
s Colobus_angolensis.KN981557.1                            1905237 1 +   2368649 G
i Colobus_angolensis.KN981557.1                          C 0 T 77
s Colobus_guereza.LG01                                   199944907 1 + 200372422 G
i Colobus_guereza.LG01                                   C 0 T 129
s Colobus_polykomos.k141_906115                              31776 1 +     84244 G
i Colobus_polykomos.k141_906115                          C 0 T 104
s Condylura_cristata.JH655891.1                           17545998 1 -  53390261 G
i Condylura_cristata.JH655891.1                          C 0 T 82
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10508 1 -     20389 G
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 T 80
s Crocidura_indochinensis.CroInd_scaffold_287352               378 1 +      4208 G
i Crocidura_indochinensis.CroInd_scaffold_287352         I 12 T 52
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24234 1 -     87169 G
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 T 65
s Cuniculus_paca.CunPac_flattened_line_231100                 2863 1 +      5455 G
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 T 83
s Dasyprocta_punctata.DasPun_flattened_line_206793            1246 1 +      3576 G
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 T 83
s Dasypus_novemcinctus.JH564415.1                            61085 1 +   2246927 G
i Dasypus_novemcinctus.JH564415.1                        C 0 T 85
s Daubentonia_madagascariensis.ctg71                      12532895 1 -  12879189 G
i Daubentonia_madagascariensis.ctg71                     C 0 T 70
s Delphinapterus_leucas.KZ290073.1                        16811194 1 +  35494412 G
i Delphinapterus_leucas.KZ290073.1                       C 0 T 83
s Desmodus_rotundus.KZ672289.1                             8627923 1 +  20541912 G
i Desmodus_rotundus.KZ672289.1                           C 0 T 83
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669423 1 +   1390856 G
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 T 83
s Diceros_bicornis.DicBicMic_scaffold_5955                    2498 1 +    198055 G
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 T 83
s Dinomys_branickii.DinBra_scaffold_21862                    34286 1 +     67921 G
i Dinomys_branickii.DinBra_scaffold_21862                C 0 T 77
s Dipodomys_ordii.KN672350.1                              18895819 1 +  37912305 A
i Dipodomys_ordii.KN672350.1                             C 0 T 83
s Dipodomys_stephensi.DipSte_scaffold_75855                  12029 1 +     14536 A
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 T 83
s Dolichotis_patagonum.DolPat_scaffold_30833                 31503 1 -     42551 G
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 T 83
s Eidolon_helvum.KE759718.1                                   7429 1 +     11740 G
i Eidolon_helvum.KE759718.1                              C 0 T 82
s Elaphurus_davidianus.JRFZ01104969.1                       310295 1 +    607251 G
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 T 83
s Elephantulus_edwardii.JH947257.1                         1089017 1 +  10337057 G
i Elephantulus_edwardii.JH947257.1                       C 0 T 82
s Enhydra_lutris.KZ291758.1                               16325782 1 -  41312741 G
i Enhydra_lutris.KZ291758.1                              C 0 T 81
s Eptesicus_fuscus.JH977646.1                              2144080 1 -  14770903 G
i Eptesicus_fuscus.JH977646.1                            C 0 T 83
s Equus_asinus.JREZ01000139.1                              1279765 1 +   4378816 G
i Equus_asinus.JREZ01000139.1                            C 0 T 83
s Equus_caballus.CM000403.2                               18527586 1 -  39960074 G
i Equus_caballus.CM000403.2                              C 0 T 83
s Equus_przewalskii.KK951119.1                               29601 1 +    498745 G
i Equus_przewalskii.KK951119.1                           C 0 T 83
s Erinaceus_europaeus.JH835339.1                           3325354 1 -   7059049 G
i Erinaceus_europaeus.JH835339.1                         C 0 T 79
s Erythrocebus_patas.Contig38                             21199939 1 -  21539334 G
i Erythrocebus_patas.Contig38                            C 0 T 77
s Eschrichtius_robustus.EscRob_flattened_line_8968           10870 1 +    133382 G
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 T 83
s Eubalaena_japonica.EubJap_flattened_line_31514             24807 1 -     44125 G
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 T 83
s Felis_catus.AANG03299807.1                                   411 1 -       507 G
i Felis_catus.AANG03299807.1                             C 0 T 65
s Felis_catus_fca126.CM031415.1                           20191989 1 + 205367284 G
i Felis_catus_fca126.CM031415.1                          C 0 T 65
s Felis_nigripes.FelNig_flattened_line_20823                  5514 1 -     36744 G
i Felis_nigripes.FelNig_flattened_line_20823             C 0 T 65
s Fukomys_damarensis.KN121974.1                             848513 1 +   3816255 G
i Fukomys_damarensis.KN121974.1                          C 0 T 83
s Galagoides_demidoff.k141_31856                              3211 1 -      3432 a
i Galagoides_demidoff.k141_31856                         C 0 T 81
s Galeopterus_variegatus.GalVar_scaffold_56069               25477 1 +     26054 G
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 T 83
s Glis_glis.GliGli_scaffold_19807                            30362 1 +     49224 A
i Glis_glis.GliGli_scaffold_19807                        C 0 T 77
s Gorilla_beringei.k141_3596273                              10568 1 -     32273 G
i Gorilla_beringei.k141_3596273                          I 138 T 138
s Gorilla_gorilla.LT578341.1                             186332718 1 + 186649187 G
i Gorilla_gorilla.LT578341.1                             I 138 T 121
s Helogale_parvula.HelPar_flattened_line_2585               238151 1 +    327341 G
i Helogale_parvula.HelPar_flattened_line_2585            C 0 T 65
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17495 1 +     36099 G
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 T 83
s Heterocephalus_glaber.JH602082.1                        20659392 1 +  22651954 G
i Heterocephalus_glaber.JH602082.1                       C 0 T 83
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 254 1 +       961 G
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 T 82
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112050 1 +    128679 G
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 T 83
s Hipposideros_armiger.JXIK01000431.1                       108388 1 +   1711038 G
i Hipposideros_armiger.JXIK01000431.1                    C 0 T 82
s Hipposideros_galeritus.HipGal_scaffold_29171               39829 1 +     43066 G
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 T 82
s Hoolock_leuconedys.ctg274                                    429267 1 +    630532 G
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40616 1 +     55795 G
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 T 65
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19861 1 -    143317 G
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 T 83
s Hylobates_agilis.k141_307679                               12390 1 -     15490 G
i Hylobates_agilis.k141_307679                           C 0 T 205
s Hylobates_klossii.k141_282416                              54395 1 +     67168 G
i Hylobates_klossii.k141_282416                          C 0 T 205
s Hylobates_pileatus_b.LG02                                     189538047 1 - 191637585 G
i Hylobates_pileatus_b.LG02                                     C 0 T 205
s Hylobates_pileatus_a.tarseq_633                            3330940 1 -  11177569 G
i Hylobates_pileatus_a.tarseq_633                          C 0 T 205
s Hystrix_cristata.HysCri_scaffold_5660                      80935 1 +    135385 G
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 T 83
s Ictidomys_tridecemlineatus.JH393364.1                    7514597 1 -   7955117 A
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 T 78
s Indri_indri.k141_3655594                                   18167 1 +     31101 G
i Indri_indri.k141_3655594                               C 0 T 70
s Inia_geoffrensis.IniGeo_flattened_line_48101               22411 1 +     23964 G
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 T 83
s Jaculus_jaculus.JH725527.1                               8271382 1 -   9596543 G
i Jaculus_jaculus.JH725527.1                             C 0 T 87
s Kogia_breviceps.KogBre_flattened_line_192630                1678 1 -      3359 G
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 T 83
s Lasiurus_borealis.LasBor_scaffold_32767                    12259 1 -     42476 G
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 T 85
s Lepilemur_ankaranensis.k141_596936                          6801 1 -     23766 G
i Lepilemur_ankaranensis.k141_596936                     C 0 T 70
s Lepilemur_dorsalis.k141_577674                             24748 1 +     45836 G
i Lepilemur_dorsalis.k141_577674                         C 0 T 70
s Lepilemur_ruficaudatus.k141_420445                         31659 1 -     32627 G
i Lepilemur_ruficaudatus.k141_420445                     C 0 T 70
s Lepilemur_septentrionalis.k141_185316                      22803 1 +     54090 G
i Lepilemur_septentrionalis.k141_185316                  C 0 T 70
s Leptonychotes_weddellii.KB714746.1                       3036118 1 +   3914936 G
i Leptonychotes_weddellii.KB714746.1                     C 0 T 84
s Lipotes_vexillifer.KE559953.1                             267489 1 -    662738 G
i Lipotes_vexillifer.KE559953.1                          C 0 T 80
s Lophocebus_aterrimus.ctg367                              1431465 1 +   1826925 G
i Lophocebus_aterrimus.ctg367                            C 0 T 78
s Loris_lydekkerianus.k141_2539221                             695 1 +     11245 A
i Loris_lydekkerianus.k141_2539221                       C 0 T 65
s Loris_tardigradus.ctg83                                   999531 1 +   6120653 A
i Loris_tardigradus.ctg83                                C 0 T 66
s Loxodonta_africana.GL010049.1                            4214527 1 -  43346337 G
i Loxodonta_africana.GL010049.1                          C 0 T 82
s Lycaon_pictus.CM007581.1                                17951735 1 -  59628241 G
i Lycaon_pictus.CM007581.1                               C 0 T 84
s Macaca_arctoides.k141_2326796                               1649 1 +     40492 G
i Macaca_arctoides.k141_2326796                          C 0 T 77
s Macaca_assamensis.Contig5                               59670909 1 +  60120075 G
i Macaca_assamensis.Contig5                              C 0 T 77
s Macaca_cyclopis.k119_18836                                  7407 1 -     26193 G
i Macaca_cyclopis.k119_18836                             C 0 T 77
s Macaca_fascicularis.k141_814140                            75201 1 -    114318 G
i Macaca_fascicularis.k141_814140                        C 0 T 77
s Macaca_fuscata.k119_255327                                   920 1 -     23192 G
i Macaca_fuscata.k119_255327                             C 0 T 77
s Macaca_leonina.k141_3550399                                10373 1 -     29190 G
i Macaca_leonina.k141_3550399                            C 0 T 77
s Macaca_maura.k141_2733130                                  18940 1 +     37952 G
i Macaca_maura.k141_2733130                              C 0 T 77
s Macaca_mulatta.NC_041758.1                             186834028 1 + 187317192 G
i Macaca_mulatta.NC_041758.1                             C 0 T 77
s Macaca_nemestrina.KQ007038.1                            25452589 1 -  25927173 G
i Macaca_nemestrina.KQ007038.1                           C 0 T 77
s Macaca_nigra.k141_1655396                                  74789 1 +     89720 G
i Macaca_nigra.k141_1655396                              C 0 T 77
s Macaca_radiata.k141_3680011                                 1786 1 +     20474 G
i Macaca_radiata.k141_3680011                            C 0 T 77
s Macaca_siberu.k141_635500                                   1587 1 -     14993 G
i Macaca_siberu.k141_635500                              C 0 T 77
s Macaca_silenus.Contig273                                  324460 1 -    668171 G
i Macaca_silenus.Contig273                               C 0 T 77
s Macaca_thibetana.k99_7456                                  15729 1 -     15935 G
i Macaca_thibetana.k99_7456                              C 0 T 77
s Macaca_tonkeana.k141_1498238                               20526 1 -     45290 G
i Macaca_tonkeana.k141_1498238                           C 0 T 77
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87575 1 +     94391 G
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 T 81
s Mandrillus_leucophaeus.scaffold280                      23932081 1 -  24302211 G
i Mandrillus_leucophaeus.scaffold280                     C 0 T 77
s Mandrillus_sphinx.Contig270                               346259 1 +    752769 G
i Mandrillus_sphinx.Contig270                            C 0 T 77
s Manis_javanica.JSZB01003497.1                              15620 1 +    737560 G
i Manis_javanica.JSZB01003497.1                          C 0 T 81
s Manis_pentadactyla.KN006162.1                              47009 1 -    317179 G
i Manis_pentadactyla.KN006162.1                          C 0 T 81
s Marmota_marmota.CZRN01000018.1                          33097447 1 -  40650429 A
i Marmota_marmota.CZRN01000018.1                         C 0 T 78
s Megaderma_lyra.MegLyr_scaffold_4542                         6790 1 -    207569 A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 T 64
s Mellivora_capensis.MelCap_flattened_line_69365              6249 1 +     13704 G
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 T 84
s Mesoplodon_bidens.MesBid_scaffold_108144                    3079 1 +     10310 G
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 T 83
s Microcebus_murinus.CM007674.1                           18283327 1 -  93316391 G
i Microcebus_murinus.CM007674.1                          C 0 T 70
s Micronycteris_hirsuta.MicHir_scaffold_52381                13434 1 -     19307 G
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 T 83
s Miniopterus_natalensis.LDJU01000034.1                    1849108 1 +   8254450 G
i Miniopterus_natalensis.LDJU01000034.1                  C 0 T 83
s Miniopterus_schreibersii.MinSch_scaffold_18080             32984 1 +     64694 G
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 T 83
s Miopithecus_ogouensis.k141_534055                           3816 1 -     28506 G
i Miopithecus_ogouensis.k141_534055                      C 0 T 77
s Mirounga_angustirostris.MirAng_flattened_line_22144        62448 1 -     63350 G
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 T 84
s Mirza_zaza.k141_952172                                      4681 1 -     37649 G
i Mirza_zaza.k141_952172                                 C 0 T 69
s Monodon_monoceros.MonMon_M_scaffold_103                    26584 1 -    437263 G
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 T 83
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137840 1 -    366855 G
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 T 83
s Moschus_moschiferus.MosMos_scaffold_61429                  27433 1 -     27816 G
i Moschus_moschiferus.MosMos_scaffold_61429              C 0 T 81
s Mungos_mungo.MunMun_flattened_line_23663                   31352 1 +     37127 G
i Mungos_mungo.MunMun_flattened_line_23663               C 0 T 65
s Murina_feae.MurFea_scaffold_85699                           5134 1 +     14753 G
i Murina_feae.MurFea_scaffold_85699                      C 0 T 74
s Muscardinus_avellanarius.MusAve_scaffold_82313              2355 1 +     14296 T
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 T 77
s Mustela_putorius.JH418006.1                               297680 1 -  14710649 G
i Mustela_putorius.JH418006.1                            C 0 T 84
s Myotis_brandtii.KE162005.1                                278304 1 -  10118263 G
i Myotis_brandtii.KE162005.1                             C 0 T 72
s Myotis_davidii.KB100139.1                                1585861 1 -   6019432 G
i Myotis_davidii.KB100139.1                              C 0 T 72
s Myotis_lucifugus.GL429869.1                              3902070 1 -   4330536 G
i Myotis_lucifugus.GL429869.1                            C 0 T 72
s Myotis_myotis.MyoMyo_scaffold_28916                        32629 1 +     33610 G
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 T 72
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186125 1 +    196477 G
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 T 87
s Nannospalax_galili.KL204047.1                            2025523 1 -   3037898 G
i Nannospalax_galili.KL204047.1                          C 0 T 76
s Nasalis_larvatus.k141_413338                                9829 1 +     21681 G
i Nasalis_larvatus.k141_413338                           C 0 T 77
s Neophocaena_asiaeorientalis.KZ687982.1                   5865540 1 +   7148211 G
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 T 83
s Noctilio_leporinus.NocLep_scaffold_251                    756404 1 +    783361 G
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 T 82
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145996 1 -   9404916 G
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 T 84
s Nycticebus_bengalensis.LG01                            102574499 1 - 196305487 A
i Nycticebus_bengalensis.LG01                            C 0 T 65
s Nycticebus_coucang.k141_5327727                             2185 1 +      8486 A
i Nycticebus_coucang.k141_5327727                        C 0 T 65
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744926 1 + 199412804 A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 T 65
s Ochotona_princeps.JH802162.1                             1355764 1 +   3988456 C
i Ochotona_princeps.JH802162.1                           C 0 T 71
s Odobenus_rosmarus.KB229312.1                              500737 1 -   2017862 G
i Odobenus_rosmarus.KB229312.1                           C 0 T 84
s Odocoileus_virginianus.KZ100018.1                         144667 1 +    630418 G
i Odocoileus_virginianus.KZ100018.1                      C 0 T 82
s Orcinus_orca.KB316932.1                                  2781455 1 -  10937097 G
i Orcinus_orca.KB316932.1                                C 0 T 83
s Orycteropus_afer.OryAfe_flattened_line_144387               6852 1 -     18566 G
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 T 82
s Otocyon_megalotis.JAEUCK010005147.1                       458750 1 -    559221 G
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 T 84
s Ovis_aries.CM001607.2                                   17585026 1 +  44047080 G
i Ovis_aries.CM001607.2                                  C 0 T 83
s Ovis_canadensis.OviCan_scaffold_2572                      173447 1 -    191736 G
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 T 83
s Pan_paniscus.KQ411613.1                                    36212 1 +     80009 g
i Pan_paniscus.KQ411613.1                                T 2406 I 2406
s Pan_troglodytes.CM009242.2                             189137581 1 + 189151597 G
i Pan_troglodytes.CM009242.2                             I 207 n 207
s Panthera_onca.PanOnc_flattened_line_3271                  147136 1 +    230217 G
i Panthera_onca.PanOnc_flattened_line_3271               C 0 T 65
s Panthera_pardus.KV860321.1                                259845 1 +  18783137 G
i Panthera_pardus.KV860321.1                             C 0 T 65
s Panthera_tigris.KE722367.1                               4716992 1 -   8748460 G
i Panthera_tigris.KE722367.1                             C 0 T 65
s Pantholops_hodgsonii.KE114653.1                          1264380 1 -   2937107 G
i Pantholops_hodgsonii.KE114653.1                        C 0 T 83
s Papio_anubis.CM001495.2                                183437403 1 + 183742232 G
i Papio_anubis.CM001495.2                                C 0 T 77
s Papio_cynocephalus.k141_4307930                             1561 1 +     20448 G
i Papio_cynocephalus.k141_4307930                        C 0 T 170
s Papio_hamadryas.Contig39                                20558087 1 +  20919399 G
i Papio_hamadryas.Contig39                               C 0 T 77
s Papio_kindae.k141_1936966                                    304 1 +     41871 G
i Papio_kindae.k141_1936966                              C 0 T 170
s Papio_papio.k141_802527                                     3590 1 +     27711 G
i Papio_papio.k141_802527                                C 0 T 59
s Papio_ursinus.k141_3428135                                  3489 1 +      9205 G
i Papio_ursinus.k141_3428135                             C 0 T 77
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8871 1 -     78924 G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 T 65
s Perodicticus_ibeanus.k141_855320                            4681 1 +     13100 A
i Perodicticus_ibeanus.k141_855320                       C 0 T 70
s Perodicticus_potto.k141_1092580                             3049 1 +     25941 A
i Perodicticus_potto.k141_1092580                        C 0 T 70
s Petromus_typicus.PetTyp_scaffold_42190                     25859 1 -     29689 G
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 T 81
s Phocoena_phocoena.PhoPho_flattened_line_24159               8502 1 +     63832 G
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 T 83
s Piliocolobus_badius.k141_1234363                           38345 1 +     62158 G
i Piliocolobus_badius.k141_1234363                       C 0 T 77
s Piliocolobus_gordonorum.k141_381342                        33072 1 +     89929 G
i Piliocolobus_gordonorum.k141_381342                    C 0 T 77
s Piliocolobus_kirkii.k141_448987                            34488 1 +     51399 G
i Piliocolobus_kirkii.k141_448987                        C 0 T 77
s Piliocolobus_tephrosceles.PDMG02000141.1                14290709 1 -  14605196 G
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 T 77
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              454 1 +     22620 G
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 T 83
s Platanista_gangetica.PlaMin_flattened_line_32310           34208 1 +     35617 G
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 T 83
s Pongo_abelii.CM009266.2                                189125762 1 + 189387572 G
i Pongo_abelii.CM009266.2                                I 203 T 203
s Pongo_pygmaeus.ctg66                                     9565366 1 +   9816681 G
i Pongo_pygmaeus.ctg66                                   I 204 T 204
s Presbytis_comata.k141_677006                               67989 1 -     81375 G
i Presbytis_comata.k141_677006                           C 0 T 77
s Presbytis_mitrata.k141_2342859                              9816 1 +     10147 G
i Presbytis_mitrata.k141_2342859                         C 0 T 77
s Procavia_capensis.ProCapCap_scaffold_85530                 10015 1 -     22811 G
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 T 82
s Propithecus_coquerelli.NW_012148875.1                     986378 1 +   2598838 A
i Propithecus_coquerelli.NW_012148875.1                  C 0 T 67
s Propithecus_coronatus.k141_347390                          24667 1 +     38485 A
i Propithecus_coronatus.k141_347390                      C 0 T 67
s Propithecus_diadema.k141_357118                              828 1 +      4256 A
i Propithecus_diadema.k141_357118                        C 0 T 67
s Propithecus_edwardsi.k141_1176054                          22186 1 +     35766 A
i Propithecus_edwardsi.k141_1176054                      C 0 T 67
s Propithecus_perrieri.k141_1200571                            369 1 -     24134 A
i Propithecus_perrieri.k141_1200571                      C 0 T 67
s Propithecus_tattersalli.k141_790011                        24181 1 -     67325 A
i Propithecus_tattersalli.k141_790011                    C 0 T 67
s Propithecus_verreauxi.k141_956661                            426 1 -      6182 A
i Propithecus_verreauxi.k141_956661                      C 0 T 67
s Pteronotus_parnellii.KE909381.1                            11227 1 -     21811 G
i Pteronotus_parnellii.KE909381.1                        C 0 T 88
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36691 1 +     42204 G
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 T 84
s Pteropus_alecto.KB030862.1                              22973698 1 +  28871421 G
i Pteropus_alecto.KB030862.1                             C 0 T 81
s Pteropus_vampyrus.KN534172.1                                1635 1 -      8028 G
i Pteropus_vampyrus.KN534172.1                           C 0 T 81
s Puma_concolor.QAVW01001104.1                            20270303 1 -  38429054 G
i Puma_concolor.QAVW01001104.1                           C 0 T 65
s Pygathrix_cinerea.k141_1153803                              9818 1 -     91421 G
i Pygathrix_cinerea.k141_1153803                         C 0 T 77
s Pygathrix_nigripes_b.ctg100                                 7603952 1 +   7812017 G
i Pygathrix_nigripes_b.ctg100                               C 0 T 77
s Pygathrix_nigripes_a.k141_215492                              9791 1 -     72585 G
i Pygathrix_nigripes_a.k141_215492                         C 0 T 77
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4915 1 +     55207 G
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 T 82
s Rhinolophus_sinicus.LVEH01000134.1                        366933 1 -   3329780 G
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 T 83
s Rhinopithecus_bieti.k119_217274                             1504 1 -     11128 g
i Rhinopithecus_bieti.k119_217274                        C 0 T 377
s Rhinopithecus_roxellana.NC_044550.1                     91230861 1 - 195417433 g
i Rhinopithecus_roxellana.NC_044550.1                    C 0 T 357
s Rhinopithecus_strykeri.ctg102                            7666509 1 +   7961872 g
i Rhinopithecus_strykeri.ctg102                          C 0 T 297
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84684 1 -     96226 G
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 T 82
s Saiga_tatarica.SaiTat_scaffold_373180                       3568 1 +      4321 G
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 T 82
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151380 1 -    313613 G
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 T 45
s Semnopithecus_entellus.k141_11662                          14333 1 -     19888 G
i Semnopithecus_entellus.k141_11662                      C 0 T 77
s Semnopithecus_hypoleucos.k141_1615806                      21538 1 +     39453 G
i Semnopithecus_hypoleucos.k141_1615806                  C 0 T 77
s Semnopithecus_johnii.k141_670120                            2062 1 +     27826 G
i Semnopithecus_johnii.k141_670120                       C 0 T 77
s Semnopithecus_priam.k141_638794                             1584 1 -     19483 G
i Semnopithecus_priam.k141_638794                        C 0 T 77
s Semnopithecus_schistaceus.k141_1584426                      1646 1 +      7198 G
i Semnopithecus_schistaceus.k141_1584426                 C 0 T 77
s Semnopithecus_vetulus.k141_1200928                          9906 1 +     15514 G
i Semnopithecus_vetulus.k141_1200928                     C 0 T 77
s Solenodon_paradoxus.SolPar_flattened_line_5840            187705 1 -    191337 G
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 T 83
s Sorex_araneus.JH798187.1                                13647035 1 -  18376816 G
i Sorex_araneus.JH798187.1                               C 0 T 64
s Spermophilus_dauricus.KZ294078.1                         1948239 1 -   3870691 A
i Spermophilus_dauricus.KZ294078.1                       C 0 T 78
s Spilogale_gracilis.SpiGra_flattened_line_13525             27233 1 +     97271 G
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 T 83
s Suricata_suricatta.SurSur_flattened_line_6629              14221 1 -    196729 A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 T 65
s Sus_scrofa.CM000828.4                                   62882474 1 -  69701581 G
i Sus_scrofa.CM000828.4                                  C 0 T 70
s Symphalangus_syndactylus.tarseq_199                      1088088 1 -   1523678 G
i Symphalangus_syndactylus.tarseq_199                    C 0 T 206
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6837 1 +     41958 G
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 T 82
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69487 1 +    116680 G
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 T 87
s Tapirus_indicus.TapInd_scaffold_9301                      115220 1 -    156842 G
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 T 83
s Tapirus_terrestris.TapTer_scaffold_755                    383675 1 +    539355 G
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 T 83
s Tarsius_lariang.k141_2201908                               10669 1 +     70052 G
i Tarsius_lariang.k141_2201908                           C 0 T 83
s Tarsius_wallacei.k141_780063                               14974 1 +     25099 G
i Tarsius_wallacei.k141_780063                           C 0 T 83
s Theropithecus_gelada.CM009954.1                        186422912 1 + 186847797 G
i Theropithecus_gelada.CM009954.1                        C 0 T 77
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103201 1 +    114563 G
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 T 82
s Tolypeutes_matacus.TolMat_scaffold_228639                   1873 1 +      8208 G
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 T 68
s Tonatia_saurophila.TonSau_scaffold_294                     78978 1 +    610378 G
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 T 83
s Trachypithecus_auratus.k141_722599                          5640 1 -     20410 G
i Trachypithecus_auratus.k141_722599                     C 0 T 74
s Trachypithecus_crepusculus.k141_1194022                     9835 1 +     15221 G
i Trachypithecus_crepusculus.k141_1194022                C 0 T 77
s Trachypithecus_cristatus.k141_580354                        5740 1 +     19930 G
i Trachypithecus_cristatus.k141_580354                   C 0 T 74
s Trachypithecus_francoisi.k141_1412647                       2170 1 -     19997 G
i Trachypithecus_francoisi.k141_1412647                  C 0 T 77
s Trachypithecus_geei.k141_277701                            42289 1 -     60166 G
i Trachypithecus_geei.k141_277701                        C 0 T 77
s Trachypithecus_germaini.k141_912491                         9761 1 -     27529 G
i Trachypithecus_germaini.k141_912491                    C 0 T 77
s Trachypithecus_hatinhensis.k141_143409                      9701 1 -     18194 G
i Trachypithecus_hatinhensis.k141_143409                 C 0 T 77
s Trachypithecus_laotum.k141_907409                           3437 1 -     21137 G
i Trachypithecus_laotum.k141_907409                      C 0 T 77
s Trachypithecus_leucocephalus.k141_587342                    2139 1 -     10723 T
i Trachypithecus_leucocephalus.k141_587342               C 0 T 77
s Trachypithecus_melamera.k141_434728                         1292 1 +      9834 G
i Trachypithecus_melamera.k141_434728                    C 0 T 77
s Trachypithecus_obscurus.k141_190785                        19610 1 +     32220 G
i Trachypithecus_obscurus.k141_190785                    C 0 T 77
s Trachypithecus_phayrei.ctg124                            5933707 1 +   6242583 G
i Trachypithecus_phayrei.ctg124                          C 0 T 77
s Trachypithecus_pileatus.k141_2007326                        2952 1 +     20839 G
i Trachypithecus_pileatus.k141_2007326                   C 0 T 77
s Tragulus_javanicus.TraJav_scaffold_140459                    685 1 -      1748 G
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 T 71
s Tupaia_chinensis.KB320699.1                              2149631 1 +   4065304 G
i Tupaia_chinensis.KB320699.1                            C 0 T 109
s Tupaia_tana.TupTan_flattened_line_97126                     3222 1 -     10553 G
i Tupaia_tana.TupTan_flattened_line_97126                C 0 T 81
s Tursiops_truncatus.MRVK01000835.1                       15737702 1 +  33153633 G
i Tursiops_truncatus.MRVK01000835.1                      C 0 T 83
s Uropsilus_gracilis.UroGra_scaffold_97021                    1933 1 -      4736 G
i Uropsilus_gracilis.UroGra_scaffold_97021               C 0 T 83
s Ursus_maritimus.KK499267.1                               4846934 1 -   5085361 G
i Ursus_maritimus.KK499267.1                             C 0 T 84
s Vicugna_pacos.KN270157.1                                 5368406 1 -   5488506 G
i Vicugna_pacos.KN270157.1                               C 0 T 83
s Vulpes_lagopus.VulLag_flattened_line_30954                  7411 1 -     43706 G
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 T 84
s Xerus_inauris.XerIna_scaffold_48378                        19734 1 -     24430 A
i Xerus_inauris.XerIna_scaffold_48378                    C 0 T 78
s Zalophus_californianus.ZalCal_flattened_line_63728          1859 1 +      2932 G
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 T 84
s Zapus_hudsonius.ZapHud_scaffold_11398                      10015 1 +     63895 G
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 T 86
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11394 1 +     12536 G
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 T 83
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Varecia_variegata.k141_1128296                              7155 0 +     24756 C
e Varecia_rubra.k141_590885                                   7107 0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414 0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25316 22 +     32600 T
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    15418 9 -    145209 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Lemur_catta.scaffold_24                                 15519761 0 -  30322482 C
e Hapalemur_occidentalis.k141_907772                          9234 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402 0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298 0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517 0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   30090 75 +     78134 T
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                               9432 0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267 0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247 0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321 0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369 0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369 0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184 0 -     25546 C
e Eulemur_collaris.k141_377015                                2154 0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453 0 -     14127 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1130 17 +     62944 TTAGAGAAACTCTAT-Aa
s Gorilla_beringei.k141_3596273                              10431 17 -     32273 TTAGAGAAACTCTAT-AA
i Gorilla_beringei.k141_3596273                          T 138 C 0
s Gorilla_gorilla.CYUI03001814.1                             26416 18 -     31004 ttacaggaactctataaa
i Gorilla_gorilla.CYUI03001814.1                         T 235 I 386
s Hoolock_leuconedys.ctg274                                    429268 17 +    630532 TTAGAGAAACTCTAT-AA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_307679                               12186 17 -     15490 TTAGAGGAACTCTAT-AA
i Hylobates_agilis.k141_307679                           T 205 C 0
s Hylobates_klossii.k141_282416                              54191 17 +     67168 TTAGAGGAACTCTAT-AA
i Hylobates_klossii.k141_282416                          T 205 C 0
s Hylobates_pileatus_b.LG02                                     189537843 17 - 191637585 tTAGGGGAACTCTAT-AA
i Hylobates_pileatus_b.LG02                                     T 205 C 0
s Hylobates_pileatus_a.tarseq_633                            3330736 17 -  11177569 TTAGAGAAACTCTAT-AA
i Hylobates_pileatus_a.tarseq_633                          T 205 C 0
s Pan_paniscus.KQ411613.1                                    38619 17 +     80009 ttagaggaactctat-aa
i Pan_paniscus.KQ411613.1                                I 2406 C 0
s Pan_troglodytes.CM009242.2                             187570846 17 + 189151597 ttagaggaactctat-aa
i Pan_troglodytes.CM009242.2                             n 207 n 207
s Pongo_abelii.CM009266.2                                189125560 17 + 189387572 TTAGAGGAACTCTAT-AA
i Pongo_abelii.CM009266.2                                T 203 T 309
s Pongo_pygmaeus.ctg66                                     9565163 17 +   9816681 TTAGAGGATCTCTAT-AA
i Pongo_pygmaeus.ctg66                                   T 204 I 1
s Symphalangus_syndactylus.tarseq_199                      1087883 17 -   1523678 TTAGAGAAACTCTAT-AA
i Symphalangus_syndactylus.tarseq_199                    T 206 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Loris_tardigradus.ctg83                                   999532 66 +   6120653 T
e Loris_lydekkerianus.k141_2539221                             696 65 +     11245 T
e Perodicticus_potto.k141_1092580                             3050 70 +     25941 T
e Perodicticus_ibeanus.k141_855320                            4682 70 +     13100 T
e Ziphius_cavirostris.ZipCav_flattened_line_71469            11395 83 +     12536 T
e Zapus_hudsonius.ZapHud_scaffold_11398                      10016 86 +     63895 T
e Zalophus_californianus.ZalCal_flattened_line_63728          1860 84 +      2932 T
e Xerus_inauris.XerIna_scaffold_48378                        19735 78 -     24430 T
e Vulpes_lagopus.VulLag_flattened_line_30954                  7412 84 -     43706 T
e Vicugna_pacos.KN270157.1                                 5368407 83 -   5488506 T
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Ursus_maritimus.KK499267.1                               4846935 84 -   5085361 T
e Uropsilus_gracilis.UroGra_scaffold_97021                    1934 83 -      4736 T
e Tursiops_truncatus.MRVK01000835.1                       15737703 83 +  33153633 T
e Tupaia_tana.TupTan_flattened_line_97126                     3223 81 -     10553 T
e Tupaia_chinensis.KB320699.1                              2149632 109 +   4065304 T
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                    686 71 -      1748 T
e Trachypithecus_pileatus.k141_2007326                        2953 77 +     20839 T
e Trachypithecus_phayrei.ctg124                            5933708 77 +   6242583 T
e Trachypithecus_obscurus.k141_190785                        19611 77 +     32220 T
e Trachypithecus_melamera.k141_434728                         1293 77 +      9834 T
e Trachypithecus_leucocephalus.k141_587342                    2140 77 -     10723 T
e Trachypithecus_laotum.k141_907409                           3438 77 -     21137 T
e Trachypithecus_hatinhensis.k141_143409                      9702 77 -     18194 T
e Trachypithecus_germaini.k141_912491                         9762 77 -     27529 T
e Trachypithecus_geei.k141_277701                            42290 77 -     60166 T
e Trachypithecus_francoisi.k141_1412647                       2171 77 -     19997 T
e Trachypithecus_cristatus.k141_580354                        5741 74 +     19930 T
e Trachypithecus_crepusculus.k141_1194022                     9836 77 +     15221 T
e Trachypithecus_auratus.k141_722599                          5641 74 -     20410 T
e Tonatia_saurophila.TonSau_scaffold_294                     78979 83 +    610378 T
e Tolypeutes_matacus.TolMat_scaffold_228639                   1874 68 +      8208 T
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103202 82 +    114563 T
e Theropithecus_gelada.CM009954.1                        186422913 77 + 186847797 T
e Tarsius_wallacei.k141_780063                               14975 83 +     25099 T
e Tarsius_lariang.k141_2201908                               10670 83 +     70052 T
e Tapirus_terrestris.TapTer_scaffold_755                    383676 83 +    539355 T
e Tapirus_indicus.TapInd_scaffold_9301                      115221 83 -    156842 T
e Tamandua_tetradactyla.TamTet_scaffold_1782                 69488 87 +    116680 T
e Tadarida_brasiliensis.TadBra_scaffold_25820                 6838 82 +     41958 T
e Sus_scrofa.CM000828.4                                   62882475 70 -  69701581 T
e Suricata_suricatta.SurSur_flattened_line_6629              14222 65 -    196729 T
e Spilogale_gracilis.SpiGra_flattened_line_13525             27234 83 +     97271 T
e Spermophilus_dauricus.KZ294078.1                         1948240 78 -   3870691 T
e Sorex_araneus.JH798187.1                                13647036 64 -  18376816 T
e Solenodon_paradoxus.SolPar_flattened_line_5840            187706 83 -    191337 T
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Semnopithecus_vetulus.k141_1200928                          9907 77 +     15514 T
e Semnopithecus_schistaceus.k141_1584426                      1647 77 +      7198 T
e Semnopithecus_priam.k141_638794                             1585 77 -     19483 T
e Semnopithecus_johnii.k141_670120                            2063 77 +     27826 T
e Semnopithecus_hypoleucos.k141_1615806                      21539 77 +     39453 T
e Semnopithecus_entellus.k141_11662                          14334 77 -     19888 T
e Scalopus_aquaticus.ScaAqu_scaffold_662                    151381 45 -    313613 T
e Saiga_tatarica.SaiTat_scaffold_373180                       3569 82 +      4321 T
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                84685 82 -     96226 T
e Rhinopithecus_strykeri.ctg102                            7666510 297 +   7961872 T
e Rhinopithecus_roxellana.NC_044550.1                     91230862 357 - 195417433 T
e Rhinopithecus_bieti.k119_217274                             1505 377 -     11128 T
e Rhinolophus_sinicus.LVEH01000134.1                        366934 83 -   3329780 T
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4916 82 +     55207 T
e Pygathrix_nigripes_a.k141_215492                              9792 77 -     72585 T
e Pygathrix_nigripes_b.ctg100                                 7603953 77 +   7812017 T
e Pygathrix_cinerea.k141_1153803                              9819 77 -     91421 T
e Puma_concolor.QAVW01001104.1                            20270304 65 -  38429054 T
e Pteropus_vampyrus.KN534172.1                                1636 81 -      8028 T
e Pteropus_alecto.KB030862.1                              22973699 81 +  28871421 T
e Pteronura_brasiliensis.PteBra_flattened_line_31117         36692 84 +     42204 T
e Pteronotus_parnellii.KE909381.1                            11228 88 -     21811 T
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Propithecus_verreauxi.k141_956661                            427 67 -      6182 T
e Propithecus_tattersalli.k141_790011                        24182 67 -     67325 T
e Propithecus_perrieri.k141_1200571                            370 67 -     24134 T
e Propithecus_edwardsi.k141_1176054                          22187 67 +     35766 T
e Propithecus_diadema.k141_357118                              829 67 +      4256 T
e Propithecus_coronatus.k141_347390                          24668 67 +     38485 T
e Propithecus_coquerelli.NW_012148875.1                     986379 67 +   2598838 T
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10016 82 -     22811 T
e Presbytis_mitrata.k141_2342859                              9817 77 +     10147 T
e Presbytis_comata.k141_677006                               67990 77 -     81375 T
e Platanista_gangetica.PlaMin_flattened_line_32310           34209 83 +     35617 T
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              455 83 +     22620 T
e Piliocolobus_tephrosceles.PDMG02000141.1                14290710 77 -  14605196 T
e Piliocolobus_kirkii.k141_448987                            34489 77 +     51399 T
e Piliocolobus_gordonorum.k141_381342                        33073 77 +     89929 T
e Piliocolobus_badius.k141_1234363                           38346 77 +     62158 T
e Phocoena_phocoena.PhoPho_flattened_line_24159               8503 83 +     63832 T
e Petromus_typicus.PetTyp_scaffold_42190                     25860 81 -     29689 T
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25316 22 +     32600 T
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8872 65 -     78924 T
e Papio_ursinus.k141_3428135                                  3490 77 +      9205 T
e Papio_papio.k141_802527                                     3591 59 +     27711 T
e Papio_kindae.k141_1936966                                    305 170 +     41871 T
e Papio_hamadryas.Contig39                                20558088 77 +  20919399 T
e Papio_cynocephalus.k141_4307930                             1562 170 +     20448 T
e Papio_anubis.CM001495.2                                183437404 77 + 183742232 T
e Pantholops_hodgsonii.KE114653.1                          1264381 83 -   2937107 T
e Panthera_tigris.KE722367.1                               4716993 65 -   8748460 T
e Panthera_pardus.KV860321.1                                259846 65 +  18783137 T
e Panthera_onca.PanOnc_flattened_line_3271                  147137 65 +    230217 T
e Ovis_canadensis.OviCan_scaffold_2572                      173448 83 -    191736 T
e Ovis_aries.CM001607.2                                   17585027 83 +  44047080 T
e Otocyon_megalotis.JAEUCK010005147.1                       458751 84 -    559221 T
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               6853 82 -     18566 T
e Orcinus_orca.KB316932.1                                  2781456 83 -  10937097 T
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144668 82 +    630418 T
e Odobenus_rosmarus.KB229312.1                              500738 84 -   2017862 T
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1355765 71 +   3988456 T
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744927 65 + 199412804 T
e Nycticebus_coucang.k141_5327727                             2186 65 +      8486 T
e Nycticebus_bengalensis.LG01                            102574500 65 - 196305487 T
e Nyctereutes_procyonoides.CAJHUB010000658.1               9145997 84 -   9404916 T
e Noctilio_leporinus.NocLep_scaffold_251                    756405 82 +    783361 T
e Neophocaena_asiaeorientalis.KZ687982.1                   5865541 83 +   7148211 T
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nasalis_larvatus.k141_413338                                9830 77 +     21681 T
e Nannospalax_galili.KL204047.1                            2025524 76 -   3037898 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186126 87 +    196477 T
e Myotis_myotis.MyoMyo_scaffold_28916                        32630 72 +     33610 T
e Myotis_lucifugus.GL429869.1                              3902071 72 -   4330536 T
e Myotis_davidii.KB100139.1                                1585862 72 -   6019432 T
e Myotis_brandtii.KE162005.1                                278305 72 -  10118263 T
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               297681 84 -  14710649 T
e Muscardinus_avellanarius.MusAve_scaffold_82313              2356 77 +     14296 T
e Murina_feae.MurFea_scaffold_85699                           5135 74 +     14753 T
e Mungos_mungo.MunMun_flattened_line_23663                   31353 65 +     37127 T
e Moschus_moschiferus.MosMos_scaffold_61429                  27434 81 -     27816 T
e Mormoops_blainvillei.MorMeg_scaffold_1417                 137841 83 -    366855 T
e Monodon_monoceros.MonMon_M_scaffold_103                    26585 83 -    437263 T
e Mirza_zaza.k141_952172                                      4682 69 -     37649 T
e Mirounga_angustirostris.MirAng_flattened_line_22144        62449 84 -     63350 T
e Miopithecus_ogouensis.k141_534055                           3817 77 -     28506 T
e Miniopterus_schreibersii.MinSch_scaffold_18080             32985 83 +     64694 T
e Miniopterus_natalensis.LDJU01000034.1                    1849109 83 +   8254450 T
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                13435 83 -     19307 T
e Microgale_talazaci.MicTal_scaffold_6613                    15418  9 -    145209 I
e Microcebus_murinus.CM007674.1                           18283328 70 -  93316391 T
e Mesoplodon_bidens.MesBid_scaffold_108144                    3080 83 +     10310 T
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365              6250 84 +     13704 T
e Megaderma_lyra.MegLyr_scaffold_4542                         6791 64 -    207569 T
e Marmota_marmota.CZRN01000018.1                          33097448 78 -  40650429 T
e Manis_pentadactyla.KN006162.1                              47010 81 -    317179 T
e Manis_javanica.JSZB01003497.1                              15621 81 +    737560 T
e Mandrillus_sphinx.Contig270                               346260 77 +    752769 T
e Mandrillus_leucophaeus.scaffold280                      23932082 77 -  24302211 T
e Macroglossus_sobrinus.MacSob_scaffold_8222                 87576 81 +     94391 T
e Macaca_tonkeana.k141_1498238                               20527 77 -     45290 T
e Macaca_thibetana.k99_7456                                  15730 77 -     15935 T
e Macaca_silenus.Contig273                                  324461 77 -    668171 T
e Macaca_siberu.k141_635500                                   1588 77 -     14993 T
e Macaca_radiata.k141_3680011                                 1787 77 +     20474 T
e Macaca_nigra.k141_1655396                                  74790 77 +     89720 T
e Macaca_nemestrina.KQ007038.1                            25452590 77 -  25927173 T
e Macaca_mulatta.NC_041758.1                             186834029 77 + 187317192 T
e Macaca_maura.k141_2733130                                  18941 77 +     37952 T
e Macaca_leonina.k141_3550399                                10374 77 -     29190 T
e Macaca_fuscata.k119_255327                                   921 77 -     23192 T
e Macaca_fascicularis.k141_814140                            75202 77 -    114318 T
e Macaca_cyclopis.k119_18836                                  7408 77 -     26193 T
e Macaca_assamensis.Contig5                               59670910 77 +  60120075 T
e Macaca_arctoides.k141_2326796                               1650 77 +     40492 T
e Lycaon_pictus.CM007581.1                                17951736 84 -  59628241 T
e Loxodonta_africana.GL010049.1                            4214528 82 -  43346337 T
e Lophocebus_aterrimus.ctg367                              1431466 78 +   1826925 T
e Lipotes_vexillifer.KE559953.1                             267490 80 -    662738 T
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3036119 84 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      22804 70 +     54090 T
e Lepilemur_ruficaudatus.k141_420445                         31660 70 -     32627 T
e Lepilemur_dorsalis.k141_577674                             24749 70 +     45836 T
e Lepilemur_ankaranensis.k141_596936                          6802 70 -     23766 T
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12260 85 -     42476 T
e Kogia_breviceps.KogBre_flattened_line_192630                1679 83 -      3359 T
e Jaculus_jaculus.JH725527.1                               8271383 87 -   9596543 T
e Inia_geoffrensis.IniGeo_flattened_line_48101               22412 83 +     23964 T
e Indri_indri.k141_3655594                                   18168 70 +     31101 T
e Ictidomys_tridecemlineatus.JH393364.1                    7514598 78 -   7955117 T
e Hystrix_cristata.HysCri_scaffold_5660                      80936 83 +    135385 T
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19862 83 -    143317 T
e Hyaena_hyaena.HyaHya_flattened_line_26932                  40617 65 +     55795 T
e Hipposideros_galeritus.HipGal_scaffold_29171               39830 82 +     43066 T
e Hipposideros_armiger.JXIK01000431.1                       108389 82 +   1711038 T
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112051 83 +    128679 T
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 255 82 +       961 T
e Heterocephalus_glaber.JH602082.1                        20659393 83 +  22651954 T
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17496 83 +     36099 T
e Helogale_parvula.HelPar_flattened_line_2585               238152 65 +    327341 T
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   30090 75 +     78134 T
e Glis_glis.GliGli_scaffold_19807                            30363 77 +     49224 T
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_56069               25478 83 +     26054 T
e Galagoides_demidoff.k141_31856                              3212 81 -      3432 T
e Fukomys_damarensis.KN121974.1                             848514 83 +   3816255 T
e Felis_nigripes.FelNig_flattened_line_20823                  5515 65 -     36744 T
e Felis_catus_fca126.CM031415.1                           20191990 65 + 205367284 T
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             24808 83 -     44125 T
e Eschrichtius_robustus.EscRob_flattened_line_8968           10871 83 +    133382 T
e Erythrocebus_patas.Contig38                             21199940 77 -  21539334 T
e Erinaceus_europaeus.JH835339.1                           3325355 79 -   7059049 T
e Equus_przewalskii.KK951119.1                               29602 83 +    498745 T
e Equus_caballus.CM000403.2                               18527587 83 -  39960074 T
e Equus_asinus.JREZ01000139.1                              1279766 83 +   4378816 T
e Eptesicus_fuscus.JH977646.1                              2144081 83 -  14770903 T
e Enhydra_lutris.KZ291758.1                               16325783 81 -  41312741 T
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089018 82 +  10337057 T
e Elaphurus_davidianus.JRFZ01104969.1                       310296 83 +    607251 T
e Eidolon_helvum.KE759718.1                                   7430 82 +     11740 T
e Dolichotis_patagonum.DolPat_scaffold_30833                 31504 83 -     42551 T
e Dipodomys_stephensi.DipSte_scaffold_75855                  12030 83 +     14536 T
e Dipodomys_ordii.KN672350.1                              18895820 83 +  37912305 T
e Dinomys_branickii.DinBra_scaffold_21862                    34287 77 +     67921 T
e Diceros_bicornis.DicBicMic_scaffold_5955                    2499 83 +    198055 T
e Dicerorhinus_sumatrensis.PEKH010002091.1                  669424 83 +   1390856 T
e Desmodus_rotundus.KZ672289.1                             8627924 83 +  20541912 T
e Delphinapterus_leucas.KZ290073.1                        16811195 83 +  35494412 T
e Daubentonia_madagascariensis.ctg71                      12532896 70 -  12879189 T
e Dasypus_novemcinctus.JH564415.1                            61086 85 +   2246927 T
e Dasyprocta_punctata.DasPun_flattened_line_206793            1247 83 +      3576 T
e Cuniculus_paca.CunPac_flattened_line_231100                 2864 83 +      5455 T
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             24235 65 -     87169 T
e Crocidura_indochinensis.CroInd_scaffold_287352               379 52 +      4208 T
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          10509 80 -     20389 T
e Condylura_cristata.JH655891.1                           17545999 82 -  53390261 T
e Colobus_polykomos.k141_906115                              31777 104 +     84244 T
e Colobus_guereza.LG01                                   199944908 129 + 200372422 T
e Colobus_angolensis.KN981557.1                            1905238 77 +   2368649 T
e Choloepus_hoffmanni.KN194906.1                            170274 87 +    839153 T
e Choloepus_didactylus.ChoDid_scaffold_45914                 15175 87 +     19366 T
e Chlorocebus_sabaeus.CM001947.1                         135416709 77 + 135778131 T
e Chlorocebus_pygerythrus.k141_1025673                        9704 77 -     50209 T
e Chlorocebus_aethiops.ctg25                              18423261 77 -  18827391 T
e Chinchilla_lanigera.JH722012.1                           1248509 80 +   2543920 T
e Cheirogaleus_medius.k141_1055463                           12075 66 +     57038 T
e Cheirogaleus_major.k141_333249                             16726 66 -     52598 T
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            4816 68 -      6351 T
e Cercopithecus_roloway.k141_3180641                         39792 77 -     41420 T
e Cercopithecus_pogonias.k141_822820                          9298 77 +     17596 T
e Cercopithecus_petaurista.k141_807961                        9322 77 -     27947 T
e Cercopithecus_nictitans.k141_3278028                        1809 77 +      7159 T
e Cercopithecus_neglectus.k141_2526306                       34517 77 -     53127 T
e Cercopithecus_mona.ctg39                                21217397 77 -  21565898 T
e Cercopithecus_albogularis.ctg5                                38811706 77 +  39242232 T
e Cercopithecus_lowei.k141_457449                             9330 77 -     11289 T
e Cercopithecus_hamlyni.k141_187466                           9311 77 -     27936 T
e Cercopithecus_diana.k141_2427854                             976 77 +      9989 T
e Cercopithecus_cephus.k141_1078548                           6623 77 +     29689 T
e Cercopithecus_ascanius.k141_1024104                         3639 77 -     20310 T
e Cercocebus_torquatus.k141_3057011                           3493 77 +     27781 T
e Cercocebus_lunulatus.k141_3846941                           3263 77 +      8260 T
e Cercocebus_chrysogaster.k141_393940                         8844 77 -     19203 T
e Cercocebus_atys.KQ010504.1                               4470295 77 +   4669795 T
e Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2609 83 -      3715 T
e Cephalopachus_bancanus.k141_2037105                         4971 83 -      8605 T
e Cavia_tschudii.CavTsc_scaffold_8919                        98614 82 +    143979 T
e Cavia_porcellus.DS562891.1                              18359739 82 -  23407841 T
e Cavia_aperea.AVPZ01000300.1                             18347479 82 -  23392119 T
e Catagonus_wagneri.CatWag_scaffold_2839                     89266 124 +    217609 T
e Castor_canadensis.CasCan_scaffold_2074                    133658 80 +    179628 T
e Carollia_perspicillata.CarPer_scaffold_92756                2893 83 -     11696 T
e Carlito_syrichta.NW_007259797.1                           141055 83 -    496798 T
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18060012 83 -  44709034 T
e Capra_aegagrus.CM003241.1                               18829292 83 +  46296322 T
e Canis_lupus_orion.HG994398.1                            18496797 84 +  63665305 T
e Canis_lupus_familiaris.chr16                            17955496 84 -  59632846 T
e Canis_lupus_dingo.QKWQ01000480.1                         9031232 84 -   9314153 T
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    181845 84 -    185531 T
e CanFam4.chr16                                           17795788 84 -  60362399 T
e Camelus_ferus.KB017975.1                                  399658 83 -   1652518 T
e Camelus_dromedarius.KN272107.1                           2331382 83 -   7040546 T
e Camelus_bactrianus.KN276810.1                            9998918 83 -  17673402 T
e Bubalus_bubalis.KI419123.1                               2818467 83 +   4408762 T
e Bos_taurus.CM000203.6                                   18082978 83 +  45695690 T
e Bos_mutus.JH880303.1                                     1124900 83 -   1948126 T
e Bos_indicus.CM003047.1                                  20272340 83 +  48749331 T
e Bison_bison.KN261452.1                                    199135 83 -    288883 T
e Beatragus_hunteri.BeaHun_scaffold_50177                    26096 83 +     34529 T
e Balaenoptera_bonaerensis.DF707048.1                         2025 83 -     18090 T
e Balaenoptera_acutorostrata.KI537508.1                   15191559 83 +  23207421 T
e Avahi_peyrierasi.k141_1424874                              49933 67 +     85213 T
e Avahi_laniger.k141_765380                                  49308 67 -     92717 T
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  2475 83 +     43469 T
e Arctocebus_calabarensis.k141_288239                        14449 70 +     17124 T
e Aplodontia_rufa.AprRuf_scaffold_68852                       7278 78 +     20879 T
e Antilocapra_americana.AntAmePen_scaffold_12469             97626 83 -    100397 T
e Anoura_caudifer.AnoCau_scaffold_1412                      183123 83 +    412891 T
e Ammotragus_lervia.NIVO01071767.1                          675174 83 -   2318259 T
e Allochrocebus_solatus.k141_166128                            534 77 -     12518 T
e Allochrocebus_preussi.k141_310680                           9377 77 -      9772 T
e Allochrocebus_lhoesti.k141_4309873                          9251 77 -     28001 T
e Allenopithecus_nigroviridis.k141_3361533                    9324 77 -     52922 T
e Allactaga_bullata.AllBul_scaffold_9566                     65003 87 -     89534 T
e Ailurus_fulgens.LNAC01001112.1                             75224 84 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9507000 83 -  29979442 T
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           823290 65 -   1699592 T

a score=0.000000
s hg38.chrUn_KI270753v1                                       1147 1 +     62944 A
s Gorilla_beringei.k141_3596273                              10448 1 -     32273 A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186332598 1 + 186649187 A
i Gorilla_gorilla.LT578341.1                             T 121 C 0
s Pan_paniscus.KQ411613.1                                    38636 1 +     80009 a
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189137392 1 + 189151597 a
i Pan_troglodytes.CM009242.2                             n 207 n 207
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Loris_tardigradus.ctg83                                   999532 66 +   6120653 T
e Loris_lydekkerianus.k141_2539221                             696 65 +     11245 T
e Perodicticus_potto.k141_1092580                             3050 70 +     25941 T
e Perodicticus_ibeanus.k141_855320                            4682 70 +     13100 T
e Ziphius_cavirostris.ZipCav_flattened_line_71469            11395 83 +     12536 T
e Zapus_hudsonius.ZapHud_scaffold_11398                      10016 86 +     63895 T
e Zalophus_californianus.ZalCal_flattened_line_63728          1860 84 +      2932 T
e Xerus_inauris.XerIna_scaffold_48378                        19735 78 -     24430 T
e Vulpes_lagopus.VulLag_flattened_line_30954                  7412 84 -     43706 T
e Vicugna_pacos.KN270157.1                                 5368407 83 -   5488506 T
e Varecia_variegata.k141_1128296                              7155 0 +     24756 C
e Varecia_rubra.k141_590885                                   7107 0 +     50397 C
e Ursus_maritimus.KK499267.1                               4846935 84 -   5085361 T
e Uropsilus_gracilis.UroGra_scaffold_97021                    1934 83 -      4736 T
e Tursiops_truncatus.MRVK01000835.1                       15737703 83 +  33153633 T
e Tupaia_tana.TupTan_flattened_line_97126                     3223 81 -     10553 T
e Tupaia_chinensis.KB320699.1                              2149632 109 +   4065304 T
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                    686 71 -      1748 T
e Trachypithecus_pileatus.k141_2007326                        2953 77 +     20839 T
e Trachypithecus_phayrei.ctg124                            5933708 77 +   6242583 T
e Trachypithecus_obscurus.k141_190785                        19611 77 +     32220 T
e Trachypithecus_melamera.k141_434728                         1293 77 +      9834 T
e Trachypithecus_leucocephalus.k141_587342                    2140 77 -     10723 T
e Trachypithecus_laotum.k141_907409                           3438 77 -     21137 T
e Trachypithecus_hatinhensis.k141_143409                      9702 77 -     18194 T
e Trachypithecus_germaini.k141_912491                         9762 77 -     27529 T
e Trachypithecus_geei.k141_277701                            42290 77 -     60166 T
e Trachypithecus_francoisi.k141_1412647                       2171 77 -     19997 T
e Trachypithecus_cristatus.k141_580354                        5741 74 +     19930 T
e Trachypithecus_crepusculus.k141_1194022                     9836 77 +     15221 T
e Trachypithecus_auratus.k141_722599                          5641 74 -     20410 T
e Tonatia_saurophila.TonSau_scaffold_294                     78979 83 +    610378 T
e Tolypeutes_matacus.TolMat_scaffold_228639                   1874 68 +      8208 T
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103202 82 +    114563 T
e Theropithecus_gelada.CM009954.1                        186422913 77 + 186847797 T
e Tarsius_wallacei.k141_780063                               14975 83 +     25099 T
e Tarsius_lariang.k141_2201908                               10670 83 +     70052 T
e Tapirus_terrestris.TapTer_scaffold_755                    383676 83 +    539355 T
e Tapirus_indicus.TapInd_scaffold_9301                      115221 83 -    156842 T
e Tamandua_tetradactyla.TamTet_scaffold_1782                 69488 87 +    116680 T
e Tadarida_brasiliensis.TadBra_scaffold_25820                 6838 82 +     41958 T
e Symphalangus_syndactylus.tarseq_199                      1087900 0 -   1523678 C
e Sus_scrofa.CM000828.4                                   62882475 70 -  69701581 T
e Suricata_suricatta.SurSur_flattened_line_6629              14222 65 -    196729 T
e Spilogale_gracilis.SpiGra_flattened_line_13525             27234 83 +     97271 T
e Spermophilus_dauricus.KZ294078.1                         1948240 78 -   3870691 T
e Sorex_araneus.JH798187.1                                13647036 64 -  18376816 T
e Solenodon_paradoxus.SolPar_flattened_line_5840            187706 83 -    191337 T
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Semnopithecus_vetulus.k141_1200928                          9907 77 +     15514 T
e Semnopithecus_schistaceus.k141_1584426                      1647 77 +      7198 T
e Semnopithecus_priam.k141_638794                             1585 77 -     19483 T
e Semnopithecus_johnii.k141_670120                            2063 77 +     27826 T
e Semnopithecus_hypoleucos.k141_1615806                      21539 77 +     39453 T
e Semnopithecus_entellus.k141_11662                          14334 77 -     19888 T
e Scalopus_aquaticus.ScaAqu_scaffold_662                    151381 45 -    313613 T
e Saiga_tatarica.SaiTat_scaffold_373180                       3569 82 +      4321 T
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                84685 82 -     96226 T
e Rhinopithecus_strykeri.ctg102                            7666510 297 +   7961872 T
e Rhinopithecus_roxellana.NC_044550.1                     91230862 357 - 195417433 T
e Rhinopithecus_bieti.k119_217274                             1505 377 -     11128 T
e Rhinolophus_sinicus.LVEH01000134.1                        366934 83 -   3329780 T
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4916 82 +     55207 T
e Pygathrix_nigripes_a.k141_215492                              9792 77 -     72585 T
e Pygathrix_nigripes_b.ctg100                                 7603953 77 +   7812017 T
e Pygathrix_cinerea.k141_1153803                              9819 77 -     91421 T
e Puma_concolor.QAVW01001104.1                            20270304 65 -  38429054 T
e Pteropus_vampyrus.KN534172.1                                1636 81 -      8028 T
e Pteropus_alecto.KB030862.1                              22973699 81 +  28871421 T
e Pteronura_brasiliensis.PteBra_flattened_line_31117         36692 84 +     42204 T
e Pteronotus_parnellii.KE909381.1                            11228 88 -     21811 T
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Propithecus_verreauxi.k141_956661                            427 67 -      6182 T
e Propithecus_tattersalli.k141_790011                        24182 67 -     67325 T
e Propithecus_perrieri.k141_1200571                            370 67 -     24134 T
e Propithecus_edwardsi.k141_1176054                          22187 67 +     35766 T
e Propithecus_diadema.k141_357118                              829 67 +      4256 T
e Propithecus_coronatus.k141_347390                          24668 67 +     38485 T
e Propithecus_coquerelli.NW_012148875.1                     986379 67 +   2598838 T
e Prolemur_simus.MPIZ01000396.1                            2592414 0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10016 82 -     22811 T
e Presbytis_mitrata.k141_2342859                              9817 77 +     10147 T
e Presbytis_comata.k141_677006                               67990 77 -     81375 T
e Pongo_pygmaeus.ctg66                                     9565180 1 +   9816681 I
e Pongo_abelii.CM009266.2                                189125577 309 + 189387572 T
e Platanista_gangetica.PlaMin_flattened_line_32310           34209 83 +     35617 T
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              455 83 +     22620 T
e Piliocolobus_tephrosceles.PDMG02000141.1                14290710 77 -  14605196 T
e Piliocolobus_kirkii.k141_448987                            34489 77 +     51399 T
e Piliocolobus_gordonorum.k141_381342                        33073 77 +     89929 T
e Piliocolobus_badius.k141_1234363                           38346 77 +     62158 T
e Phocoena_phocoena.PhoPho_flattened_line_24159               8503 83 +     63832 T
e Petromus_typicus.PetTyp_scaffold_42190                     25860 81 -     29689 T
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25316 22 +     32600 T
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8872 65 -     78924 T
e Papio_ursinus.k141_3428135                                  3490 77 +      9205 T
e Papio_papio.k141_802527                                     3591 59 +     27711 T
e Papio_kindae.k141_1936966                                    305 170 +     41871 T
e Papio_hamadryas.Contig39                                20558088 77 +  20919399 T
e Papio_cynocephalus.k141_4307930                             1562 170 +     20448 T
e Papio_anubis.CM001495.2                                183437404 77 + 183742232 T
e Pantholops_hodgsonii.KE114653.1                          1264381 83 -   2937107 T
e Panthera_tigris.KE722367.1                               4716993 65 -   8748460 T
e Panthera_pardus.KV860321.1                                259846 65 +  18783137 T
e Panthera_onca.PanOnc_flattened_line_3271                  147137 65 +    230217 T
e Ovis_canadensis.OviCan_scaffold_2572                      173448 83 -    191736 T
e Ovis_aries.CM001607.2                                   17585027 83 +  44047080 T
e Otocyon_megalotis.JAEUCK010005147.1                       458751 84 -    559221 T
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               6853 82 -     18566 T
e Orcinus_orca.KB316932.1                                  2781456 83 -  10937097 T
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144668 82 +    630418 T
e Odobenus_rosmarus.KB229312.1                              500738 84 -   2017862 T
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1355765 71 +   3988456 T
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744927 65 + 199412804 T
e Nycticebus_coucang.k141_5327727                             2186 65 +      8486 T
e Nycticebus_bengalensis.LG01                            102574500 65 - 196305487 T
e Nyctereutes_procyonoides.CAJHUB010000658.1               9145997 84 -   9404916 T
e Noctilio_leporinus.NocLep_scaffold_251                    756405 82 +    783361 T
e Neophocaena_asiaeorientalis.KZ687982.1                   5865541 83 +   7148211 T
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nasalis_larvatus.k141_413338                                9830 77 +     21681 T
e Nannospalax_galili.KL204047.1                            2025524 76 -   3037898 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186126 87 +    196477 T
e Myotis_myotis.MyoMyo_scaffold_28916                        32630 72 +     33610 T
e Myotis_lucifugus.GL429869.1                              3902071 72 -   4330536 T
e Myotis_davidii.KB100139.1                                1585862 72 -   6019432 T
e Myotis_brandtii.KE162005.1                                278305 72 -  10118263 T
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               297681 84 -  14710649 T
e Muscardinus_avellanarius.MusAve_scaffold_82313              2356 77 +     14296 T
e Murina_feae.MurFea_scaffold_85699                           5135 74 +     14753 T
e Mungos_mungo.MunMun_flattened_line_23663                   31353 65 +     37127 T
e Moschus_moschiferus.MosMos_scaffold_61429                  27434 81 -     27816 T
e Mormoops_blainvillei.MorMeg_scaffold_1417                 137841 83 -    366855 T
e Monodon_monoceros.MonMon_M_scaffold_103                    26585 83 -    437263 T
e Mirza_zaza.k141_952172                                      4682 69 -     37649 T
e Mirounga_angustirostris.MirAng_flattened_line_22144        62449 84 -     63350 T
e Miopithecus_ogouensis.k141_534055                           3817 77 -     28506 T
e Miniopterus_schreibersii.MinSch_scaffold_18080             32985 83 +     64694 T
e Miniopterus_natalensis.LDJU01000034.1                    1849109 83 +   8254450 T
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                13435 83 -     19307 T
e Microgale_talazaci.MicTal_scaffold_6613                    15418 9 -    145209 I
e Microcebus_murinus.CM007674.1                           18283328 70 -  93316391 T
e Mesoplodon_bidens.MesBid_scaffold_108144                    3080 83 +     10310 T
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365              6250 84 +     13704 T
e Megaderma_lyra.MegLyr_scaffold_4542                         6791 64 -    207569 T
e Marmota_marmota.CZRN01000018.1                          33097448 78 -  40650429 T
e Manis_pentadactyla.KN006162.1                              47010 81 -    317179 T
e Manis_javanica.JSZB01003497.1                              15621 81 +    737560 T
e Mandrillus_sphinx.Contig270                               346260 77 +    752769 T
e Mandrillus_leucophaeus.scaffold280                      23932082 77 -  24302211 T
e Macroglossus_sobrinus.MacSob_scaffold_8222                 87576 81 +     94391 T
e Macaca_tonkeana.k141_1498238                               20527 77 -     45290 T
e Macaca_thibetana.k99_7456                                  15730 77 -     15935 T
e Macaca_silenus.Contig273                                  324461 77 -    668171 T
e Macaca_siberu.k141_635500                                   1588 77 -     14993 T
e Macaca_radiata.k141_3680011                                 1787 77 +     20474 T
e Macaca_nigra.k141_1655396                                  74790 77 +     89720 T
e Macaca_nemestrina.KQ007038.1                            25452590 77 -  25927173 T
e Macaca_mulatta.NC_041758.1                             186834029 77 + 187317192 T
e Macaca_maura.k141_2733130                                  18941 77 +     37952 T
e Macaca_leonina.k141_3550399                                10374 77 -     29190 T
e Macaca_fuscata.k119_255327                                   921 77 -     23192 T
e Macaca_fascicularis.k141_814140                            75202 77 -    114318 T
e Macaca_cyclopis.k119_18836                                  7408 77 -     26193 T
e Macaca_assamensis.Contig5                               59670910 77 +  60120075 T
e Macaca_arctoides.k141_2326796                               1650 77 +     40492 T
e Lycaon_pictus.CM007581.1                                17951736 84 -  59628241 T
e Loxodonta_africana.GL010049.1                            4214528 82 -  43346337 T
e Lophocebus_aterrimus.ctg367                              1431466 78 +   1826925 T
e Lipotes_vexillifer.KE559953.1                             267490 80 -    662738 T
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3036119 84 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      22804 70 +     54090 T
e Lepilemur_ruficaudatus.k141_420445                         31660 70 -     32627 T
e Lepilemur_dorsalis.k141_577674                             24749 70 +     45836 T
e Lepilemur_ankaranensis.k141_596936                          6802 70 -     23766 T
e Lemur_catta.scaffold_24                                 15519761 0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12260 85 -     42476 T
e Kogia_breviceps.KogBre_flattened_line_192630                1679 83 -      3359 T
e Jaculus_jaculus.JH725527.1                               8271383 87 -   9596543 T
e Inia_geoffrensis.IniGeo_flattened_line_48101               22412 83 +     23964 T
e Indri_indri.k141_3655594                                   18168 70 +     31101 T
e Ictidomys_tridecemlineatus.JH393364.1                    7514598 78 -   7955117 T
e Hystrix_cristata.HysCri_scaffold_5660                      80936 83 +    135385 T
e Hylobates_pileatus_a.tarseq_633                            3330753 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189537860 0 - 191637585 C
e Hylobates_klossii.k141_282416                              54208 0 +     67168 C
e Hylobates_agilis.k141_307679                               12203 0 -     15490 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19862 83 -    143317 T
e Hyaena_hyaena.HyaHya_flattened_line_26932                  40617 65 +     55795 T
e Hoolock_leuconedys.ctg274                                    429285 0 +    630532 C
e Hipposideros_galeritus.HipGal_scaffold_29171               39830 82 +     43066 T
e Hipposideros_armiger.JXIK01000431.1                       108389 82 +   1711038 T
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112051 83 +    128679 T
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 255 82 +       961 T
e Heterocephalus_glaber.JH602082.1                        20659393 83 +  22651954 T
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17496 83 +     36099 T
e Helogale_parvula.HelPar_flattened_line_2585               238152 65 +    327341 T
e Hapalemur_occidentalis.k141_907772                          9234 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402 0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298 0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517 0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   30090 75 +     78134 T
e Glis_glis.GliGli_scaffold_19807                            30363 77 +     49224 T
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_56069               25478 83 +     26054 T
e Galagoides_demidoff.k141_31856                              3212 81 -      3432 T
e Fukomys_damarensis.KN121974.1                             848514 83 +   3816255 T
e Felis_nigripes.FelNig_flattened_line_20823                  5515 65 -     36744 T
e Felis_catus_fca126.CM031415.1                           20191990 65 + 205367284 T
e Eulemur_sanfordi.k141_1122526                               9432 0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267 0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247 0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321 0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369 0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369 0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184 0 -     25546 C
e Eulemur_collaris.k141_377015                                2154 0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453 0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             24808 83 -     44125 T
e Eschrichtius_robustus.EscRob_flattened_line_8968           10871 83 +    133382 T
e Erythrocebus_patas.Contig38                             21199940 77 -  21539334 T
e Erinaceus_europaeus.JH835339.1                           3325355 79 -   7059049 T
e Equus_przewalskii.KK951119.1                               29602 83 +    498745 T
e Equus_caballus.CM000403.2                               18527587 83 -  39960074 T
e Equus_asinus.JREZ01000139.1                              1279766 83 +   4378816 T
e Eptesicus_fuscus.JH977646.1                              2144081 83 -  14770903 T
e Enhydra_lutris.KZ291758.1                               16325783 81 -  41312741 T
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089018 82 +  10337057 T
e Elaphurus_davidianus.JRFZ01104969.1                       310296 83 +    607251 T
e Eidolon_helvum.KE759718.1                                   7430 82 +     11740 T
e Dolichotis_patagonum.DolPat_scaffold_30833                 31504 83 -     42551 T
e Dipodomys_stephensi.DipSte_scaffold_75855                  12030 83 +     14536 T
e Dipodomys_ordii.KN672350.1                              18895820 83 +  37912305 T
e Dinomys_branickii.DinBra_scaffold_21862                    34287 77 +     67921 T
e Diceros_bicornis.DicBicMic_scaffold_5955                    2499 83 +    198055 T
e Dicerorhinus_sumatrensis.PEKH010002091.1                  669424 83 +   1390856 T
e Desmodus_rotundus.KZ672289.1                             8627924 83 +  20541912 T
e Delphinapterus_leucas.KZ290073.1                        16811195 83 +  35494412 T
e Daubentonia_madagascariensis.ctg71                      12532896 70 -  12879189 T
e Dasypus_novemcinctus.JH564415.1                            61086 85 +   2246927 T
e Dasyprocta_punctata.DasPun_flattened_line_206793            1247 83 +      3576 T
e Cuniculus_paca.CunPac_flattened_line_231100                 2864 83 +      5455 T
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             24235 65 -     87169 T
e Crocidura_indochinensis.CroInd_scaffold_287352               379 52 +      4208 T
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          10509 80 -     20389 T
e Condylura_cristata.JH655891.1                           17545999 82 -  53390261 T
e Colobus_polykomos.k141_906115                              31777 104 +     84244 T
e Colobus_guereza.LG01                                   199944908 129 + 200372422 T
e Colobus_angolensis.KN981557.1                            1905238 77 +   2368649 T
e Choloepus_hoffmanni.KN194906.1                            170274 87 +    839153 T
e Choloepus_didactylus.ChoDid_scaffold_45914                 15175 87 +     19366 T
e Chlorocebus_sabaeus.CM001947.1                         135416709 77 + 135778131 T
e Chlorocebus_pygerythrus.k141_1025673                        9704 77 -     50209 T
e Chlorocebus_aethiops.ctg25                              18423261 77 -  18827391 T
e Chinchilla_lanigera.JH722012.1                           1248509 80 +   2543920 T
e Cheirogaleus_medius.k141_1055463                           12075 66 +     57038 T
e Cheirogaleus_major.k141_333249                             16726 66 -     52598 T
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            4816 68 -      6351 T
e Cercopithecus_roloway.k141_3180641                         39792 77 -     41420 T
e Cercopithecus_pogonias.k141_822820                          9298 77 +     17596 T
e Cercopithecus_petaurista.k141_807961                        9322 77 -     27947 T
e Cercopithecus_nictitans.k141_3278028                        1809 77 +      7159 T
e Cercopithecus_neglectus.k141_2526306                       34517 77 -     53127 T
e Cercopithecus_mona.ctg39                                21217397 77 -  21565898 T
e Cercopithecus_albogularis.ctg5                                38811706 77 +  39242232 T
e Cercopithecus_lowei.k141_457449                             9330 77 -     11289 T
e Cercopithecus_hamlyni.k141_187466                           9311 77 -     27936 T
e Cercopithecus_diana.k141_2427854                             976 77 +      9989 T
e Cercopithecus_cephus.k141_1078548                           6623 77 +     29689 T
e Cercopithecus_ascanius.k141_1024104                         3639 77 -     20310 T
e Cercocebus_torquatus.k141_3057011                           3493 77 +     27781 T
e Cercocebus_lunulatus.k141_3846941                           3263 77 +      8260 T
e Cercocebus_chrysogaster.k141_393940                         8844 77 -     19203 T
e Cercocebus_atys.KQ010504.1                               4470295 77 +   4669795 T
e Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2609 83 -      3715 T
e Cephalopachus_bancanus.k141_2037105                         4971 83 -      8605 T
e Cavia_tschudii.CavTsc_scaffold_8919                        98614 82 +    143979 T
e Cavia_porcellus.DS562891.1                              18359739 82 -  23407841 T
e Cavia_aperea.AVPZ01000300.1                             18347479 82 -  23392119 T
e Catagonus_wagneri.CatWag_scaffold_2839                     89266 124 +    217609 T
e Castor_canadensis.CasCan_scaffold_2074                    133658 80 +    179628 T
e Carollia_perspicillata.CarPer_scaffold_92756                2893 83 -     11696 T
e Carlito_syrichta.NW_007259797.1                           141055 83 -    496798 T
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18060012 83 -  44709034 T
e Capra_aegagrus.CM003241.1                               18829292 83 +  46296322 T
e Canis_lupus_orion.HG994398.1                            18496797 84 +  63665305 T
e Canis_lupus_familiaris.chr16                            17955496 84 -  59632846 T
e Canis_lupus_dingo.QKWQ01000480.1                         9031232 84 -   9314153 T
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    181845 84 -    185531 T
e CanFam4.chr16                                           17795788 84 -  60362399 T
e Camelus_ferus.KB017975.1                                  399658 83 -   1652518 T
e Camelus_dromedarius.KN272107.1                           2331382 83 -   7040546 T
e Camelus_bactrianus.KN276810.1                            9998918 83 -  17673402 T
e Bubalus_bubalis.KI419123.1                               2818467 83 +   4408762 T
e Bos_taurus.CM000203.6                                   18082978 83 +  45695690 T
e Bos_mutus.JH880303.1                                     1124900 83 -   1948126 T
e Bos_indicus.CM003047.1                                  20272340 83 +  48749331 T
e Bison_bison.KN261452.1                                    199135 83 -    288883 T
e Beatragus_hunteri.BeaHun_scaffold_50177                    26096 83 +     34529 T
e Balaenoptera_bonaerensis.DF707048.1                         2025 83 -     18090 T
e Balaenoptera_acutorostrata.KI537508.1                   15191559 83 +  23207421 T
e Avahi_peyrierasi.k141_1424874                              49933 67 +     85213 T
e Avahi_laniger.k141_765380                                  49308 67 -     92717 T
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  2475 83 +     43469 T
e Arctocebus_calabarensis.k141_288239                        14449 70 +     17124 T
e Aplodontia_rufa.AprRuf_scaffold_68852                       7278 78 +     20879 T
e Antilocapra_americana.AntAmePen_scaffold_12469             97626 83 -    100397 T
e Anoura_caudifer.AnoCau_scaffold_1412                      183123 83 +    412891 T
e Ammotragus_lervia.NIVO01071767.1                          675174 83 -   2318259 T
e Allochrocebus_solatus.k141_166128                            534 77 -     12518 T
e Allochrocebus_preussi.k141_310680                           9377 77 -      9772 T
e Allochrocebus_lhoesti.k141_4309873                          9251 77 -     28001 T
e Allenopithecus_nigroviridis.k141_3361533                    9324 77 -     52922 T
e Allactaga_bullata.AllBul_scaffold_9566                     65003 87 -     89534 T
e Ailurus_fulgens.LNAC01001112.1                             75224 84 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9507000 83 -  29979442 T
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           823290 65 -   1699592 T

a score=0.000000
s hg38.chrUn_KI270753v1                                       1148 21 +     62944 TGAATCACATGAAACAGAATG
s Gorilla_beringei.k141_3596273                              10449 21 -     32273 TGAATCACATGAAACAGAATG
i Gorilla_beringei.k141_3596273                          C 0 T 179
s Gorilla_gorilla.LT578341.1                             186332599 21 + 186649187 TGAATCACATGAAACAGAATG
i Gorilla_gorilla.LT578341.1                             C 0 T 177
s Hoolock_leuconedys.ctg274                                    429285 21 +    630532 TGAATCACATGAAACAGAATT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_307679                               12203 21 -     15490 CAAATCAAATGAAACAGAATG
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              54208 21 +     67168 CGAATCAAATGAAACAGAATG
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189537860 21 - 191637585 CGAATCAAATGAAACAGAATG
i Hylobates_pileatus_b.LG02                                     C 0 T 205
s Hylobates_pileatus_a.tarseq_633                            3330753 21 -  11177569 TGAATCACATGAAACAGAGTG
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    38637 21 +     80009 tgaatcacatgaaacagaatg
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             187570863 21 + 189151597 tgaatcacatgaaacagaatg
i Pan_troglodytes.CM009242.2                             n 207 n 207
s Pongo_abelii.CM009266.2                                189125268 21 + 189387572 TGAATCACATGAAACAGAGTG
i Pongo_abelii.CM009266.2                                T 309 C 0
s Pongo_pygmaeus.ctg66                                     9565181 21 +   9816681 TGAATCACATGAAACAGAGTG
i Pongo_pygmaeus.ctg66                                   I 1 C 0
s Symphalangus_syndactylus.tarseq_199                      1087900 21 -   1523678 TGAATCACATGAAACGGAATG
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Loris_tardigradus.ctg83                                   999532 66 +   6120653 T
e Loris_lydekkerianus.k141_2539221                             696 65 +     11245 T
e Perodicticus_potto.k141_1092580                             3050 70 +     25941 T
e Perodicticus_ibeanus.k141_855320                            4682 70 +     13100 T
e Ziphius_cavirostris.ZipCav_flattened_line_71469            11395 83 +     12536 T
e Zapus_hudsonius.ZapHud_scaffold_11398                      10016 86 +     63895 T
e Zalophus_californianus.ZalCal_flattened_line_63728          1860 84 +      2932 T
e Xerus_inauris.XerIna_scaffold_48378                        19735 78 -     24430 T
e Vulpes_lagopus.VulLag_flattened_line_30954                  7412 84 -     43706 T
e Vicugna_pacos.KN270157.1                                 5368407 83 -   5488506 T
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Ursus_maritimus.KK499267.1                               4846935 84 -   5085361 T
e Uropsilus_gracilis.UroGra_scaffold_97021                    1934 83 -      4736 T
e Tursiops_truncatus.MRVK01000835.1                       15737703 83 +  33153633 T
e Tupaia_tana.TupTan_flattened_line_97126                     3223 81 -     10553 T
e Tupaia_chinensis.KB320699.1                              2149632 109 +   4065304 T
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                    686 71 -      1748 T
e Trachypithecus_pileatus.k141_2007326                        2953 77 +     20839 T
e Trachypithecus_phayrei.ctg124                            5933708 77 +   6242583 T
e Trachypithecus_obscurus.k141_190785                        19611 77 +     32220 T
e Trachypithecus_melamera.k141_434728                         1293 77 +      9834 T
e Trachypithecus_leucocephalus.k141_587342                    2140 77 -     10723 T
e Trachypithecus_laotum.k141_907409                           3438 77 -     21137 T
e Trachypithecus_hatinhensis.k141_143409                      9702 77 -     18194 T
e Trachypithecus_germaini.k141_912491                         9762 77 -     27529 T
e Trachypithecus_geei.k141_277701                            42290 77 -     60166 T
e Trachypithecus_francoisi.k141_1412647                       2171 77 -     19997 T
e Trachypithecus_cristatus.k141_580354                        5741 74 +     19930 T
e Trachypithecus_crepusculus.k141_1194022                     9836 77 +     15221 T
e Trachypithecus_auratus.k141_722599                          5641 74 -     20410 T
e Tonatia_saurophila.TonSau_scaffold_294                     78979 83 +    610378 T
e Tolypeutes_matacus.TolMat_scaffold_228639                   1874 68 +      8208 T
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103202 82 +    114563 T
e Theropithecus_gelada.CM009954.1                        186422913 77 + 186847797 T
e Tarsius_wallacei.k141_780063                               14975 83 +     25099 T
e Tarsius_lariang.k141_2201908                               10670 83 +     70052 T
e Tapirus_terrestris.TapTer_scaffold_755                    383676 83 +    539355 T
e Tapirus_indicus.TapInd_scaffold_9301                      115221 83 -    156842 T
e Tamandua_tetradactyla.TamTet_scaffold_1782                 69488 87 +    116680 T
e Tadarida_brasiliensis.TadBra_scaffold_25820                 6838 82 +     41958 T
e Sus_scrofa.CM000828.4                                   62882475 70 -  69701581 T
e Suricata_suricatta.SurSur_flattened_line_6629              14222 65 -    196729 T
e Spilogale_gracilis.SpiGra_flattened_line_13525             27234 83 +     97271 T
e Spermophilus_dauricus.KZ294078.1                         1948240 78 -   3870691 T
e Sorex_araneus.JH798187.1                                13647036 64 -  18376816 T
e Solenodon_paradoxus.SolPar_flattened_line_5840            187706 83 -    191337 T
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Semnopithecus_vetulus.k141_1200928                          9907 77 +     15514 T
e Semnopithecus_schistaceus.k141_1584426                      1647 77 +      7198 T
e Semnopithecus_priam.k141_638794                             1585 77 -     19483 T
e Semnopithecus_johnii.k141_670120                            2063 77 +     27826 T
e Semnopithecus_hypoleucos.k141_1615806                      21539 77 +     39453 T
e Semnopithecus_entellus.k141_11662                          14334 77 -     19888 T
e Scalopus_aquaticus.ScaAqu_scaffold_662                    151381 45 -    313613 T
e Saiga_tatarica.SaiTat_scaffold_373180                       3569 82 +      4321 T
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                84685 82 -     96226 T
e Rhinopithecus_strykeri.ctg102                            7666510 297 +   7961872 T
e Rhinopithecus_roxellana.NC_044550.1                     91230862 357 - 195417433 T
e Rhinopithecus_bieti.k119_217274                             1505 377 -     11128 T
e Rhinolophus_sinicus.LVEH01000134.1                        366934 83 -   3329780 T
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4916 82 +     55207 T
e Pygathrix_nigripes_a.k141_215492                              9792 77 -     72585 T
e Pygathrix_nigripes_b.ctg100                                 7603953 77 +   7812017 T
e Pygathrix_cinerea.k141_1153803                              9819 77 -     91421 T
e Puma_concolor.QAVW01001104.1                            20270304 65 -  38429054 T
e Pteropus_vampyrus.KN534172.1                                1636 81 -      8028 T
e Pteropus_alecto.KB030862.1                              22973699 81 +  28871421 T
e Pteronura_brasiliensis.PteBra_flattened_line_31117         36692 84 +     42204 T
e Pteronotus_parnellii.KE909381.1                            11228 88 -     21811 T
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Propithecus_verreauxi.k141_956661                            427 67 -      6182 T
e Propithecus_tattersalli.k141_790011                        24182 67 -     67325 T
e Propithecus_perrieri.k141_1200571                            370 67 -     24134 T
e Propithecus_edwardsi.k141_1176054                          22187 67 +     35766 T
e Propithecus_diadema.k141_357118                              829 67 +      4256 T
e Propithecus_coronatus.k141_347390                          24668 67 +     38485 T
e Propithecus_coquerelli.NW_012148875.1                     986379 67 +   2598838 T
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10016 82 -     22811 T
e Presbytis_mitrata.k141_2342859                              9817 77 +     10147 T
e Presbytis_comata.k141_677006                               67990 77 -     81375 T
e Platanista_gangetica.PlaMin_flattened_line_32310           34209 83 +     35617 T
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              455 83 +     22620 T
e Piliocolobus_tephrosceles.PDMG02000141.1                14290710 77 -  14605196 T
e Piliocolobus_kirkii.k141_448987                            34489 77 +     51399 T
e Piliocolobus_gordonorum.k141_381342                        33073 77 +     89929 T
e Piliocolobus_badius.k141_1234363                           38346 77 +     62158 T
e Phocoena_phocoena.PhoPho_flattened_line_24159               8503 83 +     63832 T
e Petromus_typicus.PetTyp_scaffold_42190                     25860 81 -     29689 T
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25316 22 +     32600 T
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8872 65 -     78924 T
e Papio_ursinus.k141_3428135                                  3490 77 +      9205 T
e Papio_papio.k141_802527                                     3591 59 +     27711 T
e Papio_kindae.k141_1936966                                    305 170 +     41871 T
e Papio_hamadryas.Contig39                                20558088 77 +  20919399 T
e Papio_cynocephalus.k141_4307930                             1562 170 +     20448 T
e Papio_anubis.CM001495.2                                183437404 77 + 183742232 T
e Pantholops_hodgsonii.KE114653.1                          1264381 83 -   2937107 T
e Panthera_tigris.KE722367.1                               4716993 65 -   8748460 T
e Panthera_pardus.KV860321.1                                259846 65 +  18783137 T
e Panthera_onca.PanOnc_flattened_line_3271                  147137 65 +    230217 T
e Ovis_canadensis.OviCan_scaffold_2572                      173448 83 -    191736 T
e Ovis_aries.CM001607.2                                   17585027 83 +  44047080 T
e Otocyon_megalotis.JAEUCK010005147.1                       458751 84 -    559221 T
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               6853 82 -     18566 T
e Orcinus_orca.KB316932.1                                  2781456 83 -  10937097 T
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144668 82 +    630418 T
e Odobenus_rosmarus.KB229312.1                              500738 84 -   2017862 T
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1355765 71 +   3988456 T
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744927 65 + 199412804 T
e Nycticebus_coucang.k141_5327727                             2186 65 +      8486 T
e Nycticebus_bengalensis.LG01                            102574500 65 - 196305487 T
e Nyctereutes_procyonoides.CAJHUB010000658.1               9145997 84 -   9404916 T
e Noctilio_leporinus.NocLep_scaffold_251                    756405 82 +    783361 T
e Neophocaena_asiaeorientalis.KZ687982.1                   5865541 83 +   7148211 T
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nasalis_larvatus.k141_413338                                9830 77 +     21681 T
e Nannospalax_galili.KL204047.1                            2025524 76 -   3037898 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186126 87 +    196477 T
e Myotis_myotis.MyoMyo_scaffold_28916                        32630 72 +     33610 T
e Myotis_lucifugus.GL429869.1                              3902071 72 -   4330536 T
e Myotis_davidii.KB100139.1                                1585862 72 -   6019432 T
e Myotis_brandtii.KE162005.1                                278305 72 -  10118263 T
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               297681 84 -  14710649 T
e Muscardinus_avellanarius.MusAve_scaffold_82313              2356 77 +     14296 T
e Murina_feae.MurFea_scaffold_85699                           5135 74 +     14753 T
e Mungos_mungo.MunMun_flattened_line_23663                   31353 65 +     37127 T
e Moschus_moschiferus.MosMos_scaffold_61429                  27434 81 -     27816 T
e Mormoops_blainvillei.MorMeg_scaffold_1417                 137841 83 -    366855 T
e Monodon_monoceros.MonMon_M_scaffold_103                    26585 83 -    437263 T
e Mirza_zaza.k141_952172                                      4682 69 -     37649 T
e Mirounga_angustirostris.MirAng_flattened_line_22144        62449 84 -     63350 T
e Miopithecus_ogouensis.k141_534055                           3817 77 -     28506 T
e Miniopterus_schreibersii.MinSch_scaffold_18080             32985 83 +     64694 T
e Miniopterus_natalensis.LDJU01000034.1                    1849109 83 +   8254450 T
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                13435 83 -     19307 T
e Microgale_talazaci.MicTal_scaffold_6613                    15418  9 -    145209 I
e Microcebus_murinus.CM007674.1                           18283328 70 -  93316391 T
e Mesoplodon_bidens.MesBid_scaffold_108144                    3080 83 +     10310 T
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365              6250 84 +     13704 T
e Megaderma_lyra.MegLyr_scaffold_4542                         6791 64 -    207569 T
e Marmota_marmota.CZRN01000018.1                          33097448 78 -  40650429 T
e Manis_pentadactyla.KN006162.1                              47010 81 -    317179 T
e Manis_javanica.JSZB01003497.1                              15621 81 +    737560 T
e Mandrillus_sphinx.Contig270                               346260 77 +    752769 T
e Mandrillus_leucophaeus.scaffold280                      23932082 77 -  24302211 T
e Macroglossus_sobrinus.MacSob_scaffold_8222                 87576 81 +     94391 T
e Macaca_tonkeana.k141_1498238                               20527 77 -     45290 T
e Macaca_thibetana.k99_7456                                  15730 77 -     15935 T
e Macaca_silenus.Contig273                                  324461 77 -    668171 T
e Macaca_siberu.k141_635500                                   1588 77 -     14993 T
e Macaca_radiata.k141_3680011                                 1787 77 +     20474 T
e Macaca_nigra.k141_1655396                                  74790 77 +     89720 T
e Macaca_nemestrina.KQ007038.1                            25452590 77 -  25927173 T
e Macaca_mulatta.NC_041758.1                             186834029 77 + 187317192 T
e Macaca_maura.k141_2733130                                  18941 77 +     37952 T
e Macaca_leonina.k141_3550399                                10374 77 -     29190 T
e Macaca_fuscata.k119_255327                                   921 77 -     23192 T
e Macaca_fascicularis.k141_814140                            75202 77 -    114318 T
e Macaca_cyclopis.k119_18836                                  7408 77 -     26193 T
e Macaca_assamensis.Contig5                               59670910 77 +  60120075 T
e Macaca_arctoides.k141_2326796                               1650 77 +     40492 T
e Lycaon_pictus.CM007581.1                                17951736 84 -  59628241 T
e Loxodonta_africana.GL010049.1                            4214528 82 -  43346337 T
e Lophocebus_aterrimus.ctg367                              1431466 78 +   1826925 T
e Lipotes_vexillifer.KE559953.1                             267490 80 -    662738 T
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3036119 84 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      22804 70 +     54090 T
e Lepilemur_ruficaudatus.k141_420445                         31660 70 -     32627 T
e Lepilemur_dorsalis.k141_577674                             24749 70 +     45836 T
e Lepilemur_ankaranensis.k141_596936                          6802 70 -     23766 T
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12260 85 -     42476 T
e Kogia_breviceps.KogBre_flattened_line_192630                1679 83 -      3359 T
e Jaculus_jaculus.JH725527.1                               8271383 87 -   9596543 T
e Inia_geoffrensis.IniGeo_flattened_line_48101               22412 83 +     23964 T
e Indri_indri.k141_3655594                                   18168 70 +     31101 T
e Ictidomys_tridecemlineatus.JH393364.1                    7514598 78 -   7955117 T
e Hystrix_cristata.HysCri_scaffold_5660                      80936 83 +    135385 T
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19862 83 -    143317 T
e Hyaena_hyaena.HyaHya_flattened_line_26932                  40617 65 +     55795 T
e Hipposideros_galeritus.HipGal_scaffold_29171               39830 82 +     43066 T
e Hipposideros_armiger.JXIK01000431.1                       108389 82 +   1711038 T
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112051 83 +    128679 T
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 255 82 +       961 T
e Heterocephalus_glaber.JH602082.1                        20659393 83 +  22651954 T
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17496 83 +     36099 T
e Helogale_parvula.HelPar_flattened_line_2585               238152 65 +    327341 T
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   30090 75 +     78134 T
e Glis_glis.GliGli_scaffold_19807                            30363 77 +     49224 T
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_56069               25478 83 +     26054 T
e Galagoides_demidoff.k141_31856                              3212 81 -      3432 T
e Fukomys_damarensis.KN121974.1                             848514 83 +   3816255 T
e Felis_nigripes.FelNig_flattened_line_20823                  5515 65 -     36744 T
e Felis_catus_fca126.CM031415.1                           20191990 65 + 205367284 T
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             24808 83 -     44125 T
e Eschrichtius_robustus.EscRob_flattened_line_8968           10871 83 +    133382 T
e Erythrocebus_patas.Contig38                             21199940 77 -  21539334 T
e Erinaceus_europaeus.JH835339.1                           3325355 79 -   7059049 T
e Equus_przewalskii.KK951119.1                               29602 83 +    498745 T
e Equus_caballus.CM000403.2                               18527587 83 -  39960074 T
e Equus_asinus.JREZ01000139.1                              1279766 83 +   4378816 T
e Eptesicus_fuscus.JH977646.1                              2144081 83 -  14770903 T
e Enhydra_lutris.KZ291758.1                               16325783 81 -  41312741 T
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089018 82 +  10337057 T
e Elaphurus_davidianus.JRFZ01104969.1                       310296 83 +    607251 T
e Eidolon_helvum.KE759718.1                                   7430 82 +     11740 T
e Dolichotis_patagonum.DolPat_scaffold_30833                 31504 83 -     42551 T
e Dipodomys_stephensi.DipSte_scaffold_75855                  12030 83 +     14536 T
e Dipodomys_ordii.KN672350.1                              18895820 83 +  37912305 T
e Dinomys_branickii.DinBra_scaffold_21862                    34287 77 +     67921 T
e Diceros_bicornis.DicBicMic_scaffold_5955                    2499 83 +    198055 T
e Dicerorhinus_sumatrensis.PEKH010002091.1                  669424 83 +   1390856 T
e Desmodus_rotundus.KZ672289.1                             8627924 83 +  20541912 T
e Delphinapterus_leucas.KZ290073.1                        16811195 83 +  35494412 T
e Daubentonia_madagascariensis.ctg71                      12532896 70 -  12879189 T
e Dasypus_novemcinctus.JH564415.1                            61086 85 +   2246927 T
e Dasyprocta_punctata.DasPun_flattened_line_206793            1247 83 +      3576 T
e Cuniculus_paca.CunPac_flattened_line_231100                 2864 83 +      5455 T
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             24235 65 -     87169 T
e Crocidura_indochinensis.CroInd_scaffold_287352               379 52 +      4208 T
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          10509 80 -     20389 T
e Condylura_cristata.JH655891.1                           17545999 82 -  53390261 T
e Colobus_polykomos.k141_906115                              31777 104 +     84244 T
e Colobus_guereza.LG01                                   199944908 129 + 200372422 T
e Colobus_angolensis.KN981557.1                            1905238 77 +   2368649 T
e Choloepus_hoffmanni.KN194906.1                            170274 87 +    839153 T
e Choloepus_didactylus.ChoDid_scaffold_45914                 15175 87 +     19366 T
e Chlorocebus_sabaeus.CM001947.1                         135416709 77 + 135778131 T
e Chlorocebus_pygerythrus.k141_1025673                        9704 77 -     50209 T
e Chlorocebus_aethiops.ctg25                              18423261 77 -  18827391 T
e Chinchilla_lanigera.JH722012.1                           1248509 80 +   2543920 T
e Cheirogaleus_medius.k141_1055463                           12075 66 +     57038 T
e Cheirogaleus_major.k141_333249                             16726 66 -     52598 T
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            4816 68 -      6351 T
e Cercopithecus_roloway.k141_3180641                         39792 77 -     41420 T
e Cercopithecus_pogonias.k141_822820                          9298 77 +     17596 T
e Cercopithecus_petaurista.k141_807961                        9322 77 -     27947 T
e Cercopithecus_nictitans.k141_3278028                        1809 77 +      7159 T
e Cercopithecus_neglectus.k141_2526306                       34517 77 -     53127 T
e Cercopithecus_mona.ctg39                                21217397 77 -  21565898 T
e Cercopithecus_albogularis.ctg5                                38811706 77 +  39242232 T
e Cercopithecus_lowei.k141_457449                             9330 77 -     11289 T
e Cercopithecus_hamlyni.k141_187466                           9311 77 -     27936 T
e Cercopithecus_diana.k141_2427854                             976 77 +      9989 T
e Cercopithecus_cephus.k141_1078548                           6623 77 +     29689 T
e Cercopithecus_ascanius.k141_1024104                         3639 77 -     20310 T
e Cercocebus_torquatus.k141_3057011                           3493 77 +     27781 T
e Cercocebus_lunulatus.k141_3846941                           3263 77 +      8260 T
e Cercocebus_chrysogaster.k141_393940                         8844 77 -     19203 T
e Cercocebus_atys.KQ010504.1                               4470295 77 +   4669795 T
e Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2609 83 -      3715 T
e Cephalopachus_bancanus.k141_2037105                         4971 83 -      8605 T
e Cavia_tschudii.CavTsc_scaffold_8919                        98614 82 +    143979 T
e Cavia_porcellus.DS562891.1                              18359739 82 -  23407841 T
e Cavia_aperea.AVPZ01000300.1                             18347479 82 -  23392119 T
e Catagonus_wagneri.CatWag_scaffold_2839                     89266 124 +    217609 T
e Castor_canadensis.CasCan_scaffold_2074                    133658 80 +    179628 T
e Carollia_perspicillata.CarPer_scaffold_92756                2893 83 -     11696 T
e Carlito_syrichta.NW_007259797.1                           141055 83 -    496798 T
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18060012 83 -  44709034 T
e Capra_aegagrus.CM003241.1                               18829292 83 +  46296322 T
e Canis_lupus_orion.HG994398.1                            18496797 84 +  63665305 T
e Canis_lupus_familiaris.chr16                            17955496 84 -  59632846 T
e Canis_lupus_dingo.QKWQ01000480.1                         9031232 84 -   9314153 T
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    181845 84 -    185531 T
e CanFam4.chr16                                           17795788 84 -  60362399 T
e Camelus_ferus.KB017975.1                                  399658 83 -   1652518 T
e Camelus_dromedarius.KN272107.1                           2331382 83 -   7040546 T
e Camelus_bactrianus.KN276810.1                            9998918 83 -  17673402 T
e Bubalus_bubalis.KI419123.1                               2818467 83 +   4408762 T
e Bos_taurus.CM000203.6                                   18082978 83 +  45695690 T
e Bos_mutus.JH880303.1                                     1124900 83 -   1948126 T
e Bos_indicus.CM003047.1                                  20272340 83 +  48749331 T
e Bison_bison.KN261452.1                                    199135 83 -    288883 T
e Beatragus_hunteri.BeaHun_scaffold_50177                    26096 83 +     34529 T
e Balaenoptera_bonaerensis.DF707048.1                         2025 83 -     18090 T
e Balaenoptera_acutorostrata.KI537508.1                   15191559 83 +  23207421 T
e Avahi_peyrierasi.k141_1424874                              49933 67 +     85213 T
e Avahi_laniger.k141_765380                                  49308 67 -     92717 T
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  2475 83 +     43469 T
e Arctocebus_calabarensis.k141_288239                        14449 70 +     17124 T
e Aplodontia_rufa.AprRuf_scaffold_68852                       7278 78 +     20879 T
e Antilocapra_americana.AntAmePen_scaffold_12469             97626 83 -    100397 T
e Anoura_caudifer.AnoCau_scaffold_1412                      183123 83 +    412891 T
e Ammotragus_lervia.NIVO01071767.1                          675174 83 -   2318259 T
e Allochrocebus_solatus.k141_166128                            534 77 -     12518 T
e Allochrocebus_preussi.k141_310680                           9377 77 -      9772 T
e Allochrocebus_lhoesti.k141_4309873                          9251 77 -     28001 T
e Allenopithecus_nigroviridis.k141_3361533                    9324 77 -     52922 T
e Allactaga_bullata.AllBul_scaffold_9566                     65003 87 -     89534 T
e Ailurus_fulgens.LNAC01001112.1                             75224 84 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9507000 83 -  29979442 T
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           823290 65 -   1699592 T

a score=0.000000
s hg38.chrUn_KI270753v1                                       1169 28 +     62944 ATTC-----CGTTGTCACC--------GAGTAGAACCTGCT
s Gorilla_beringei.k141_2022027                               1820 28 +      3305 GTTC-----CATTGTCACC--------AAGTAGAACCTGCT
i Gorilla_beringei.k141_2022027                          T 143 I 97
s Gorilla_gorilla.CYUI03001204.1                              7859 41 -     63219 CATTACAGATATTGTCAGATAGAATGCTAGTAGAACCTGCT
i Gorilla_gorilla.CYUI03001204.1                         n 177 I 660
s Hoolock_leuconedys.ctg274                                    429306 28 +    630532 ATTC-----CGTTGTCACC--------GAGTAGAACCTGCT
i Hoolock_leuconedys.ctg274                                 C 0 I 2
s Hylobates_agilis.k141_307679                               12224 28 -     15490 GTTC-----CGTTGTCACC--------GAGTAGAACCTGCT
i Hylobates_agilis.k141_307679                           C 0 I 2
s Hylobates_klossii.k141_282416                              54229 28 +     67168 GATC-----CGTTGTCACC--------GAGTAGAACCTGCT
i Hylobates_klossii.k141_282416                          C 0 I 2
s Hylobates_pileatus_b.LG02                                     189537676 28 - 191637585 GTTC-----CGTTGTCACC--------GAGTAGAACCTGCT
i Hylobates_pileatus_b.LG02                                     T 205 I 2
s Hylobates_pileatus_a.tarseq_633                            3330774 28 -  11177569 GTTC-----CATTGTCACC--------GAGTAGAACCTGCT
i Hylobates_pileatus_a.tarseq_633                          C 0 I 2
s Pan_paniscus.KQ411613.1                                    38658 24 +     80009 gttc-----cgttgtcacc--------gagtagaacc----
i Pan_paniscus.KQ411613.1                                C 0 T 267
s Pan_troglodytes.CM009242.2                             189137414 28 + 189151597 attc-----cgttgtcacc--------gagtagaacctgct
i Pan_troglodytes.CM009242.2                             n 207 C 0
s Pongo_abelii.CM009266.2                                189125289 28 + 189387572 GTTC-----CGTTGTCACT--------GAGTAGAACCTGCT
i Pongo_abelii.CM009266.2                                C 0 I 309
s Pongo_pygmaeus.ctg66                                     9565202 28 +   9816681 GTTC-----CGTTGTCACT--------GAGTAGAACCTGCT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1087921 28 -   1523678 GTTC-----CATTGTCACC--------GAGTAGAACCTGCT
i Symphalangus_syndactylus.tarseq_199                    C 0 I 2
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Loris_tardigradus.ctg83                                   999532 66 +   6120653 T
e Loris_lydekkerianus.k141_2539221                             696 65 +     11245 T
e Perodicticus_potto.k141_1092580                             3050 70 +     25941 T
e Perodicticus_ibeanus.k141_855320                            4682 70 +     13100 T
e Ziphius_cavirostris.ZipCav_flattened_line_71469            11395 83 +     12536 T
e Zapus_hudsonius.ZapHud_scaffold_11398                      10016 86 +     63895 T
e Zalophus_californianus.ZalCal_flattened_line_63728          1860 84 +      2932 T
e Xerus_inauris.XerIna_scaffold_48378                        19735 78 -     24430 T
e Vulpes_lagopus.VulLag_flattened_line_30954                  7412 84 -     43706 T
e Vicugna_pacos.KN270157.1                                 5368407 83 -   5488506 T
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Ursus_maritimus.KK499267.1                               4846935 84 -   5085361 T
e Uropsilus_gracilis.UroGra_scaffold_97021                    1934 83 -      4736 T
e Tursiops_truncatus.MRVK01000835.1                       15737703 83 +  33153633 T
e Tupaia_tana.TupTan_flattened_line_97126                     3223 81 -     10553 T
e Tupaia_chinensis.KB320699.1                              2149632 109 +   4065304 T
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                    686 71 -      1748 T
e Trachypithecus_pileatus.k141_2007326                        2953 77 +     20839 T
e Trachypithecus_phayrei.ctg124                            5933708 77 +   6242583 T
e Trachypithecus_obscurus.k141_190785                        19611 77 +     32220 T
e Trachypithecus_melamera.k141_434728                         1293 77 +      9834 T
e Trachypithecus_leucocephalus.k141_587342                    2140 77 -     10723 T
e Trachypithecus_laotum.k141_907409                           3438 77 -     21137 T
e Trachypithecus_hatinhensis.k141_143409                      9702 77 -     18194 T
e Trachypithecus_germaini.k141_912491                         9762 77 -     27529 T
e Trachypithecus_geei.k141_277701                            42290 77 -     60166 T
e Trachypithecus_francoisi.k141_1412647                       2171 77 -     19997 T
e Trachypithecus_cristatus.k141_580354                        5741 74 +     19930 T
e Trachypithecus_crepusculus.k141_1194022                     9836 77 +     15221 T
e Trachypithecus_auratus.k141_722599                          5641 74 -     20410 T
e Tonatia_saurophila.TonSau_scaffold_294                     78979 83 +    610378 T
e Tolypeutes_matacus.TolMat_scaffold_228639                   1874 68 +      8208 T
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103202 82 +    114563 T
e Theropithecus_gelada.CM009954.1                        186422913 77 + 186847797 T
e Tarsius_wallacei.k141_780063                               14975 83 +     25099 T
e Tarsius_lariang.k141_2201908                               10670 83 +     70052 T
e Tapirus_terrestris.TapTer_scaffold_755                    383676 83 +    539355 T
e Tapirus_indicus.TapInd_scaffold_9301                      115221 83 -    156842 T
e Tamandua_tetradactyla.TamTet_scaffold_1782                 69488 87 +    116680 T
e Tadarida_brasiliensis.TadBra_scaffold_25820                 6838 82 +     41958 T
e Sus_scrofa.CM000828.4                                   62882475 70 -  69701581 T
e Suricata_suricatta.SurSur_flattened_line_6629              14222 65 -    196729 T
e Spilogale_gracilis.SpiGra_flattened_line_13525             27234 83 +     97271 T
e Spermophilus_dauricus.KZ294078.1                         1948240 78 -   3870691 T
e Sorex_araneus.JH798187.1                                13647036 64 -  18376816 T
e Solenodon_paradoxus.SolPar_flattened_line_5840            187706 83 -    191337 T
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Semnopithecus_vetulus.k141_1200928                          9907 77 +     15514 T
e Semnopithecus_schistaceus.k141_1584426                      1647 77 +      7198 T
e Semnopithecus_priam.k141_638794                             1585 77 -     19483 T
e Semnopithecus_johnii.k141_670120                            2063 77 +     27826 T
e Semnopithecus_hypoleucos.k141_1615806                      21539 77 +     39453 T
e Semnopithecus_entellus.k141_11662                          14334 77 -     19888 T
e Scalopus_aquaticus.ScaAqu_scaffold_662                    151381 45 -    313613 T
e Saiga_tatarica.SaiTat_scaffold_373180                       3569 82 +      4321 T
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                84685 82 -     96226 T
e Rhinopithecus_strykeri.ctg102                            7666510 297 +   7961872 T
e Rhinopithecus_roxellana.NC_044550.1                     91230862 357 - 195417433 T
e Rhinopithecus_bieti.k119_217274                             1505 377 -     11128 T
e Rhinolophus_sinicus.LVEH01000134.1                        366934 83 -   3329780 T
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4916 82 +     55207 T
e Pygathrix_nigripes_a.k141_215492                              9792 77 -     72585 T
e Pygathrix_nigripes_b.ctg100                                 7603953 77 +   7812017 T
e Pygathrix_cinerea.k141_1153803                              9819 77 -     91421 T
e Puma_concolor.QAVW01001104.1                            20270304 65 -  38429054 T
e Pteropus_vampyrus.KN534172.1                                1636 81 -      8028 T
e Pteropus_alecto.KB030862.1                              22973699 81 +  28871421 T
e Pteronura_brasiliensis.PteBra_flattened_line_31117         36692 84 +     42204 T
e Pteronotus_parnellii.KE909381.1                            11228 88 -     21811 T
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Propithecus_verreauxi.k141_956661                            427 67 -      6182 T
e Propithecus_tattersalli.k141_790011                        24182 67 -     67325 T
e Propithecus_perrieri.k141_1200571                            370 67 -     24134 T
e Propithecus_edwardsi.k141_1176054                          22187 67 +     35766 T
e Propithecus_diadema.k141_357118                              829 67 +      4256 T
e Propithecus_coronatus.k141_347390                          24668 67 +     38485 T
e Propithecus_coquerelli.NW_012148875.1                     986379 67 +   2598838 T
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10016 82 -     22811 T
e Presbytis_mitrata.k141_2342859                              9817 77 +     10147 T
e Presbytis_comata.k141_677006                               67990 77 -     81375 T
e Platanista_gangetica.PlaMin_flattened_line_32310           34209 83 +     35617 T
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              455 83 +     22620 T
e Piliocolobus_tephrosceles.PDMG02000141.1                14290710 77 -  14605196 T
e Piliocolobus_kirkii.k141_448987                            34489 77 +     51399 T
e Piliocolobus_gordonorum.k141_381342                        33073 77 +     89929 T
e Piliocolobus_badius.k141_1234363                           38346 77 +     62158 T
e Phocoena_phocoena.PhoPho_flattened_line_24159               8503 83 +     63832 T
e Petromus_typicus.PetTyp_scaffold_42190                     25860 81 -     29689 T
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25316 22 +     32600 T
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8872 65 -     78924 T
e Papio_ursinus.k141_3428135                                  3490 77 +      9205 T
e Papio_papio.k141_802527                                     3591 59 +     27711 T
e Papio_kindae.k141_1936966                                    305 170 +     41871 T
e Papio_hamadryas.Contig39                                20558088 77 +  20919399 T
e Papio_cynocephalus.k141_4307930                             1562 170 +     20448 T
e Papio_anubis.CM001495.2                                183437404 77 + 183742232 T
e Pantholops_hodgsonii.KE114653.1                          1264381 83 -   2937107 T
e Panthera_tigris.KE722367.1                               4716993 65 -   8748460 T
e Panthera_pardus.KV860321.1                                259846 65 +  18783137 T
e Panthera_onca.PanOnc_flattened_line_3271                  147137 65 +    230217 T
e Ovis_canadensis.OviCan_scaffold_2572                      173448 83 -    191736 T
e Ovis_aries.CM001607.2                                   17585027 83 +  44047080 T
e Otocyon_megalotis.JAEUCK010005147.1                       458751 84 -    559221 T
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               6853 82 -     18566 T
e Orcinus_orca.KB316932.1                                  2781456 83 -  10937097 T
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144668 82 +    630418 T
e Odobenus_rosmarus.KB229312.1                              500738 84 -   2017862 T
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1355765 71 +   3988456 T
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744927 65 + 199412804 T
e Nycticebus_coucang.k141_5327727                             2186 65 +      8486 T
e Nycticebus_bengalensis.LG01                            102574500 65 - 196305487 T
e Nyctereutes_procyonoides.CAJHUB010000658.1               9145997 84 -   9404916 T
e Noctilio_leporinus.NocLep_scaffold_251                    756405 82 +    783361 T
e Neophocaena_asiaeorientalis.KZ687982.1                   5865541 83 +   7148211 T
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nasalis_larvatus.k141_413338                                9830 77 +     21681 T
e Nannospalax_galili.KL204047.1                            2025524 76 -   3037898 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186126 87 +    196477 T
e Myotis_myotis.MyoMyo_scaffold_28916                        32630 72 +     33610 T
e Myotis_lucifugus.GL429869.1                              3902071 72 -   4330536 T
e Myotis_davidii.KB100139.1                                1585862 72 -   6019432 T
e Myotis_brandtii.KE162005.1                                278305 72 -  10118263 T
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               297681 84 -  14710649 T
e Muscardinus_avellanarius.MusAve_scaffold_82313              2356 77 +     14296 T
e Murina_feae.MurFea_scaffold_85699                           5135 74 +     14753 T
e Mungos_mungo.MunMun_flattened_line_23663                   31353 65 +     37127 T
e Moschus_moschiferus.MosMos_scaffold_61429                  27434 81 -     27816 T
e Mormoops_blainvillei.MorMeg_scaffold_1417                 137841 83 -    366855 T
e Monodon_monoceros.MonMon_M_scaffold_103                    26585 83 -    437263 T
e Mirza_zaza.k141_952172                                      4682 69 -     37649 T
e Mirounga_angustirostris.MirAng_flattened_line_22144        62449 84 -     63350 T
e Miopithecus_ogouensis.k141_534055                           3817 77 -     28506 T
e Miniopterus_schreibersii.MinSch_scaffold_18080             32985 83 +     64694 T
e Miniopterus_natalensis.LDJU01000034.1                    1849109 83 +   8254450 T
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                13435 83 -     19307 T
e Microgale_talazaci.MicTal_scaffold_6613                    15418  9 -    145209 I
e Microcebus_murinus.CM007674.1                           18283328 70 -  93316391 T
e Mesoplodon_bidens.MesBid_scaffold_108144                    3080 83 +     10310 T
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365              6250 84 +     13704 T
e Megaderma_lyra.MegLyr_scaffold_4542                         6791 64 -    207569 T
e Marmota_marmota.CZRN01000018.1                          33097448 78 -  40650429 T
e Manis_pentadactyla.KN006162.1                              47010 81 -    317179 T
e Manis_javanica.JSZB01003497.1                              15621 81 +    737560 T
e Mandrillus_sphinx.Contig270                               346260 77 +    752769 T
e Mandrillus_leucophaeus.scaffold280                      23932082 77 -  24302211 T
e Macroglossus_sobrinus.MacSob_scaffold_8222                 87576 81 +     94391 T
e Macaca_tonkeana.k141_1498238                               20527 77 -     45290 T
e Macaca_thibetana.k99_7456                                  15730 77 -     15935 T
e Macaca_silenus.Contig273                                  324461 77 -    668171 T
e Macaca_siberu.k141_635500                                   1588 77 -     14993 T
e Macaca_radiata.k141_3680011                                 1787 77 +     20474 T
e Macaca_nigra.k141_1655396                                  74790 77 +     89720 T
e Macaca_nemestrina.KQ007038.1                            25452590 77 -  25927173 T
e Macaca_mulatta.NC_041758.1                             186834029 77 + 187317192 T
e Macaca_maura.k141_2733130                                  18941 77 +     37952 T
e Macaca_leonina.k141_3550399                                10374 77 -     29190 T
e Macaca_fuscata.k119_255327                                   921 77 -     23192 T
e Macaca_fascicularis.k141_814140                            75202 77 -    114318 T
e Macaca_cyclopis.k119_18836                                  7408 77 -     26193 T
e Macaca_assamensis.Contig5                               59670910 77 +  60120075 T
e Macaca_arctoides.k141_2326796                               1650 77 +     40492 T
e Lycaon_pictus.CM007581.1                                17951736 84 -  59628241 T
e Loxodonta_africana.GL010049.1                            4214528 82 -  43346337 T
e Lophocebus_aterrimus.ctg367                              1431466 78 +   1826925 T
e Lipotes_vexillifer.KE559953.1                             267490 80 -    662738 T
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3036119 84 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      22804 70 +     54090 T
e Lepilemur_ruficaudatus.k141_420445                         31660 70 -     32627 T
e Lepilemur_dorsalis.k141_577674                             24749 70 +     45836 T
e Lepilemur_ankaranensis.k141_596936                          6802 70 -     23766 T
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12260 85 -     42476 T
e Kogia_breviceps.KogBre_flattened_line_192630                1679 83 -      3359 T
e Jaculus_jaculus.JH725527.1                               8271383 87 -   9596543 T
e Inia_geoffrensis.IniGeo_flattened_line_48101               22412 83 +     23964 T
e Indri_indri.k141_3655594                                   18168 70 +     31101 T
e Ictidomys_tridecemlineatus.JH393364.1                    7514598 78 -   7955117 T
e Hystrix_cristata.HysCri_scaffold_5660                      80936 83 +    135385 T
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19862 83 -    143317 T
e Hyaena_hyaena.HyaHya_flattened_line_26932                  40617 65 +     55795 T
e Hipposideros_galeritus.HipGal_scaffold_29171               39830 82 +     43066 T
e Hipposideros_armiger.JXIK01000431.1                       108389 82 +   1711038 T
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112051 83 +    128679 T
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 255 82 +       961 T
e Heterocephalus_glaber.JH602082.1                        20659393 83 +  22651954 T
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17496 83 +     36099 T
e Helogale_parvula.HelPar_flattened_line_2585               238152 65 +    327341 T
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   30090 75 +     78134 T
e Glis_glis.GliGli_scaffold_19807                            30363 77 +     49224 T
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_56069               25478 83 +     26054 T
e Galagoides_demidoff.k141_31856                              3212 81 -      3432 T
e Fukomys_damarensis.KN121974.1                             848514 83 +   3816255 T
e Felis_nigripes.FelNig_flattened_line_20823                  5515 65 -     36744 T
e Felis_catus_fca126.CM031415.1                           20191990 65 + 205367284 T
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             24808 83 -     44125 T
e Eschrichtius_robustus.EscRob_flattened_line_8968           10871 83 +    133382 T
e Erythrocebus_patas.Contig38                             21199940 77 -  21539334 T
e Erinaceus_europaeus.JH835339.1                           3325355 79 -   7059049 T
e Equus_przewalskii.KK951119.1                               29602 83 +    498745 T
e Equus_caballus.CM000403.2                               18527587 83 -  39960074 T
e Equus_asinus.JREZ01000139.1                              1279766 83 +   4378816 T
e Eptesicus_fuscus.JH977646.1                              2144081 83 -  14770903 T
e Enhydra_lutris.KZ291758.1                               16325783 81 -  41312741 T
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089018 82 +  10337057 T
e Elaphurus_davidianus.JRFZ01104969.1                       310296 83 +    607251 T
e Eidolon_helvum.KE759718.1                                   7430 82 +     11740 T
e Dolichotis_patagonum.DolPat_scaffold_30833                 31504 83 -     42551 T
e Dipodomys_stephensi.DipSte_scaffold_75855                  12030 83 +     14536 T
e Dipodomys_ordii.KN672350.1                              18895820 83 +  37912305 T
e Dinomys_branickii.DinBra_scaffold_21862                    34287 77 +     67921 T
e Diceros_bicornis.DicBicMic_scaffold_5955                    2499 83 +    198055 T
e Dicerorhinus_sumatrensis.PEKH010002091.1                  669424 83 +   1390856 T
e Desmodus_rotundus.KZ672289.1                             8627924 83 +  20541912 T
e Delphinapterus_leucas.KZ290073.1                        16811195 83 +  35494412 T
e Daubentonia_madagascariensis.ctg71                      12532896 70 -  12879189 T
e Dasypus_novemcinctus.JH564415.1                            61086 85 +   2246927 T
e Dasyprocta_punctata.DasPun_flattened_line_206793            1247 83 +      3576 T
e Cuniculus_paca.CunPac_flattened_line_231100                 2864 83 +      5455 T
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             24235 65 -     87169 T
e Crocidura_indochinensis.CroInd_scaffold_287352               379 52 +      4208 T
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          10509 80 -     20389 T
e Condylura_cristata.JH655891.1                           17545999 82 -  53390261 T
e Colobus_polykomos.k141_906115                              31777 104 +     84244 T
e Colobus_guereza.LG01                                   199944908 129 + 200372422 T
e Colobus_angolensis.KN981557.1                            1905238 77 +   2368649 T
e Choloepus_hoffmanni.KN194906.1                            170274 87 +    839153 T
e Choloepus_didactylus.ChoDid_scaffold_45914                 15175 87 +     19366 T
e Chlorocebus_sabaeus.CM001947.1                         135416709 77 + 135778131 T
e Chlorocebus_pygerythrus.k141_1025673                        9704 77 -     50209 T
e Chlorocebus_aethiops.ctg25                              18423261 77 -  18827391 T
e Chinchilla_lanigera.JH722012.1                           1248509 80 +   2543920 T
e Cheirogaleus_medius.k141_1055463                           12075 66 +     57038 T
e Cheirogaleus_major.k141_333249                             16726 66 -     52598 T
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            4816 68 -      6351 T
e Cercopithecus_roloway.k141_3180641                         39792 77 -     41420 T
e Cercopithecus_pogonias.k141_822820                          9298 77 +     17596 T
e Cercopithecus_petaurista.k141_807961                        9322 77 -     27947 T
e Cercopithecus_nictitans.k141_3278028                        1809 77 +      7159 T
e Cercopithecus_neglectus.k141_2526306                       34517 77 -     53127 T
e Cercopithecus_mona.ctg39                                21217397 77 -  21565898 T
e Cercopithecus_albogularis.ctg5                                38811706 77 +  39242232 T
e Cercopithecus_lowei.k141_457449                             9330 77 -     11289 T
e Cercopithecus_hamlyni.k141_187466                           9311 77 -     27936 T
e Cercopithecus_diana.k141_2427854                             976 77 +      9989 T
e Cercopithecus_cephus.k141_1078548                           6623 77 +     29689 T
e Cercopithecus_ascanius.k141_1024104                         3639 77 -     20310 T
e Cercocebus_torquatus.k141_3057011                           3493 77 +     27781 T
e Cercocebus_lunulatus.k141_3846941                           3263 77 +      8260 T
e Cercocebus_chrysogaster.k141_393940                         8844 77 -     19203 T
e Cercocebus_atys.KQ010504.1                               4470295 77 +   4669795 T
e Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2609 83 -      3715 T
e Cephalopachus_bancanus.k141_2037105                         4971 83 -      8605 T
e Cavia_tschudii.CavTsc_scaffold_8919                        98614 82 +    143979 T
e Cavia_porcellus.DS562891.1                              18359739 82 -  23407841 T
e Cavia_aperea.AVPZ01000300.1                             18347479 82 -  23392119 T
e Catagonus_wagneri.CatWag_scaffold_2839                     89266 124 +    217609 T
e Castor_canadensis.CasCan_scaffold_2074                    133658 80 +    179628 T
e Carollia_perspicillata.CarPer_scaffold_92756                2893 83 -     11696 T
e Carlito_syrichta.NW_007259797.1                           141055 83 -    496798 T
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18060012 83 -  44709034 T
e Capra_aegagrus.CM003241.1                               18829292 83 +  46296322 T
e Canis_lupus_orion.HG994398.1                            18496797 84 +  63665305 T
e Canis_lupus_familiaris.chr16                            17955496 84 -  59632846 T
e Canis_lupus_dingo.QKWQ01000480.1                         9031232 84 -   9314153 T
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    181845 84 -    185531 T
e CanFam4.chr16                                           17795788 84 -  60362399 T
e Camelus_ferus.KB017975.1                                  399658 83 -   1652518 T
e Camelus_dromedarius.KN272107.1                           2331382 83 -   7040546 T
e Camelus_bactrianus.KN276810.1                            9998918 83 -  17673402 T
e Bubalus_bubalis.KI419123.1                               2818467 83 +   4408762 T
e Bos_taurus.CM000203.6                                   18082978 83 +  45695690 T
e Bos_mutus.JH880303.1                                     1124900 83 -   1948126 T
e Bos_indicus.CM003047.1                                  20272340 83 +  48749331 T
e Bison_bison.KN261452.1                                    199135 83 -    288883 T
e Beatragus_hunteri.BeaHun_scaffold_50177                    26096 83 +     34529 T
e Balaenoptera_bonaerensis.DF707048.1                         2025 83 -     18090 T
e Balaenoptera_acutorostrata.KI537508.1                   15191559 83 +  23207421 T
e Avahi_peyrierasi.k141_1424874                              49933 67 +     85213 T
e Avahi_laniger.k141_765380                                  49308 67 -     92717 T
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  2475 83 +     43469 T
e Arctocebus_calabarensis.k141_288239                        14449 70 +     17124 T
e Aplodontia_rufa.AprRuf_scaffold_68852                       7278 78 +     20879 T
e Antilocapra_americana.AntAmePen_scaffold_12469             97626 83 -    100397 T
e Anoura_caudifer.AnoCau_scaffold_1412                      183123 83 +    412891 T
e Ammotragus_lervia.NIVO01071767.1                          675174 83 -   2318259 T
e Allochrocebus_solatus.k141_166128                            534 77 -     12518 T
e Allochrocebus_preussi.k141_310680                           9377 77 -      9772 T
e Allochrocebus_lhoesti.k141_4309873                          9251 77 -     28001 T
e Allenopithecus_nigroviridis.k141_3361533                    9324 77 -     52922 T
e Allactaga_bullata.AllBul_scaffold_9566                     65003 87 -     89534 T
e Ailurus_fulgens.LNAC01001112.1                             75224 84 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9507000 83 -  29979442 T
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           823290 65 -   1699592 T

a score=0.000000
s hg38.chrUn_KI270753v1                                       1197 2 +     62944 AT
s Gorilla_gorilla.CYUI03001814.1                             26820 2 -     31004 at
i Gorilla_gorilla.CYUI03001814.1                         I 386 T 320
s Pan_troglodytes.CM009242.2                             189137442 2 + 189151597 at
i Pan_troglodytes.CM009242.2                             C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Loris_tardigradus.ctg83                                   999532 66 +   6120653 T
e Loris_lydekkerianus.k141_2539221                             696 65 +     11245 T
e Perodicticus_potto.k141_1092580                             3050 70 +     25941 T
e Perodicticus_ibeanus.k141_855320                            4682 70 +     13100 T
e Ziphius_cavirostris.ZipCav_flattened_line_71469            11395 83 +     12536 T
e Zapus_hudsonius.ZapHud_scaffold_11398                      10016 86 +     63895 T
e Zalophus_californianus.ZalCal_flattened_line_63728          1860 84 +      2932 T
e Xerus_inauris.XerIna_scaffold_48378                        19735 78 -     24430 T
e Vulpes_lagopus.VulLag_flattened_line_30954                  7412 84 -     43706 T
e Vicugna_pacos.KN270157.1                                 5368407 83 -   5488506 T
e Varecia_variegata.k141_1128296                              7155 0 +     24756 C
e Varecia_rubra.k141_590885                                   7107 0 +     50397 C
e Ursus_maritimus.KK499267.1                               4846935 84 -   5085361 T
e Uropsilus_gracilis.UroGra_scaffold_97021                    1934 83 -      4736 T
e Tursiops_truncatus.MRVK01000835.1                       15737703 83 +  33153633 T
e Tupaia_tana.TupTan_flattened_line_97126                     3223 81 -     10553 T
e Tupaia_chinensis.KB320699.1                              2149632 109 +   4065304 T
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                    686 71 -      1748 T
e Trachypithecus_pileatus.k141_2007326                        2953 77 +     20839 T
e Trachypithecus_phayrei.ctg124                            5933708 77 +   6242583 T
e Trachypithecus_obscurus.k141_190785                        19611 77 +     32220 T
e Trachypithecus_melamera.k141_434728                         1293 77 +      9834 T
e Trachypithecus_leucocephalus.k141_587342                    2140 77 -     10723 T
e Trachypithecus_laotum.k141_907409                           3438 77 -     21137 T
e Trachypithecus_hatinhensis.k141_143409                      9702 77 -     18194 T
e Trachypithecus_germaini.k141_912491                         9762 77 -     27529 T
e Trachypithecus_geei.k141_277701                            42290 77 -     60166 T
e Trachypithecus_francoisi.k141_1412647                       2171 77 -     19997 T
e Trachypithecus_cristatus.k141_580354                        5741 74 +     19930 T
e Trachypithecus_crepusculus.k141_1194022                     9836 77 +     15221 T
e Trachypithecus_auratus.k141_722599                          5641 74 -     20410 T
e Tonatia_saurophila.TonSau_scaffold_294                     78979 83 +    610378 T
e Tolypeutes_matacus.TolMat_scaffold_228639                   1874 68 +      8208 T
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103202 82 +    114563 T
e Theropithecus_gelada.CM009954.1                        186422913 77 + 186847797 T
e Tarsius_wallacei.k141_780063                               14975 83 +     25099 T
e Tarsius_lariang.k141_2201908                               10670 83 +     70052 T
e Tapirus_terrestris.TapTer_scaffold_755                    383676 83 +    539355 T
e Tapirus_indicus.TapInd_scaffold_9301                      115221 83 -    156842 T
e Tamandua_tetradactyla.TamTet_scaffold_1782                 69488 87 +    116680 T
e Tadarida_brasiliensis.TadBra_scaffold_25820                 6838 82 +     41958 T
e Symphalangus_syndactylus.tarseq_199                      1087949 2 -   1523678 I
e Sus_scrofa.CM000828.4                                   62882475 70 -  69701581 T
e Suricata_suricatta.SurSur_flattened_line_6629              14222 65 -    196729 T
e Spilogale_gracilis.SpiGra_flattened_line_13525             27234 83 +     97271 T
e Spermophilus_dauricus.KZ294078.1                         1948240 78 -   3870691 T
e Sorex_araneus.JH798187.1                                13647036 64 -  18376816 T
e Solenodon_paradoxus.SolPar_flattened_line_5840            187706 83 -    191337 T
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Semnopithecus_vetulus.k141_1200928                          9907 77 +     15514 T
e Semnopithecus_schistaceus.k141_1584426                      1647 77 +      7198 T
e Semnopithecus_priam.k141_638794                             1585 77 -     19483 T
e Semnopithecus_johnii.k141_670120                            2063 77 +     27826 T
e Semnopithecus_hypoleucos.k141_1615806                      21539 77 +     39453 T
e Semnopithecus_entellus.k141_11662                          14334 77 -     19888 T
e Scalopus_aquaticus.ScaAqu_scaffold_662                    151381 45 -    313613 T
e Saiga_tatarica.SaiTat_scaffold_373180                       3569 82 +      4321 T
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                84685 82 -     96226 T
e Rhinopithecus_strykeri.ctg102                            7666510 297 +   7961872 T
e Rhinopithecus_roxellana.NC_044550.1                     91230862 357 - 195417433 T
e Rhinopithecus_bieti.k119_217274                             1505 377 -     11128 T
e Rhinolophus_sinicus.LVEH01000134.1                        366934 83 -   3329780 T
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4916 82 +     55207 T
e Pygathrix_nigripes_a.k141_215492                              9792 77 -     72585 T
e Pygathrix_nigripes_b.ctg100                                 7603953 77 +   7812017 T
e Pygathrix_cinerea.k141_1153803                              9819 77 -     91421 T
e Puma_concolor.QAVW01001104.1                            20270304 65 -  38429054 T
e Pteropus_vampyrus.KN534172.1                                1636 81 -      8028 T
e Pteropus_alecto.KB030862.1                              22973699 81 +  28871421 T
e Pteronura_brasiliensis.PteBra_flattened_line_31117         36692 84 +     42204 T
e Pteronotus_parnellii.KE909381.1                            11228 88 -     21811 T
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Propithecus_verreauxi.k141_956661                            427 67 -      6182 T
e Propithecus_tattersalli.k141_790011                        24182 67 -     67325 T
e Propithecus_perrieri.k141_1200571                            370 67 -     24134 T
e Propithecus_edwardsi.k141_1176054                          22187 67 +     35766 T
e Propithecus_diadema.k141_357118                              829 67 +      4256 T
e Propithecus_coronatus.k141_347390                          24668 67 +     38485 T
e Propithecus_coquerelli.NW_012148875.1                     986379 67 +   2598838 T
e Prolemur_simus.MPIZ01000396.1                            2592414 0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10016 82 -     22811 T
e Presbytis_mitrata.k141_2342859                              9817 77 +     10147 T
e Presbytis_comata.k141_677006                               67990 77 -     81375 T
e Pongo_pygmaeus.ctg66                                     9565230 0 +   9816681 C
e Pongo_abelii.CM009266.2                                189125317 309 + 189387572 I
e Platanista_gangetica.PlaMin_flattened_line_32310           34209 83 +     35617 T
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              455 83 +     22620 T
e Piliocolobus_tephrosceles.PDMG02000141.1                14290710 77 -  14605196 T
e Piliocolobus_kirkii.k141_448987                            34489 77 +     51399 T
e Piliocolobus_gordonorum.k141_381342                        33073 77 +     89929 T
e Piliocolobus_badius.k141_1234363                           38346 77 +     62158 T
e Phocoena_phocoena.PhoPho_flattened_line_24159               8503 83 +     63832 T
e Petromus_typicus.PetTyp_scaffold_42190                     25860 81 -     29689 T
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25316 22 +     32600 T
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8872 65 -     78924 T
e Papio_ursinus.k141_3428135                                  3490 77 +      9205 T
e Papio_papio.k141_802527                                     3591 59 +     27711 T
e Papio_kindae.k141_1936966                                    305 170 +     41871 T
e Papio_hamadryas.Contig39                                20558088 77 +  20919399 T
e Papio_cynocephalus.k141_4307930                             1562 170 +     20448 T
e Papio_anubis.CM001495.2                                183437404 77 + 183742232 T
e Pantholops_hodgsonii.KE114653.1                          1264381 83 -   2937107 T
e Panthera_tigris.KE722367.1                               4716993 65 -   8748460 T
e Panthera_pardus.KV860321.1                                259846 65 +  18783137 T
e Panthera_onca.PanOnc_flattened_line_3271                  147137 65 +    230217 T
e Pan_paniscus.KQ411613.1                                    38682 267 +     80009 T
e Ovis_canadensis.OviCan_scaffold_2572                      173448 83 -    191736 T
e Ovis_aries.CM001607.2                                   17585027 83 +  44047080 T
e Otocyon_megalotis.JAEUCK010005147.1                       458751 84 -    559221 T
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               6853 82 -     18566 T
e Orcinus_orca.KB316932.1                                  2781456 83 -  10937097 T
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144668 82 +    630418 T
e Odobenus_rosmarus.KB229312.1                              500738 84 -   2017862 T
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1355765 71 +   3988456 T
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744927 65 + 199412804 T
e Nycticebus_coucang.k141_5327727                             2186 65 +      8486 T
e Nycticebus_bengalensis.LG01                            102574500 65 - 196305487 T
e Nyctereutes_procyonoides.CAJHUB010000658.1               9145997 84 -   9404916 T
e Noctilio_leporinus.NocLep_scaffold_251                    756405 82 +    783361 T
e Neophocaena_asiaeorientalis.KZ687982.1                   5865541 83 +   7148211 T
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nasalis_larvatus.k141_413338                                9830 77 +     21681 T
e Nannospalax_galili.KL204047.1                            2025524 76 -   3037898 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186126 87 +    196477 T
e Myotis_myotis.MyoMyo_scaffold_28916                        32630 72 +     33610 T
e Myotis_lucifugus.GL429869.1                              3902071 72 -   4330536 T
e Myotis_davidii.KB100139.1                                1585862 72 -   6019432 T
e Myotis_brandtii.KE162005.1                                278305 72 -  10118263 T
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               297681 84 -  14710649 T
e Muscardinus_avellanarius.MusAve_scaffold_82313              2356 77 +     14296 T
e Murina_feae.MurFea_scaffold_85699                           5135 74 +     14753 T
e Mungos_mungo.MunMun_flattened_line_23663                   31353 65 +     37127 T
e Moschus_moschiferus.MosMos_scaffold_61429                  27434 81 -     27816 T
e Mormoops_blainvillei.MorMeg_scaffold_1417                 137841 83 -    366855 T
e Monodon_monoceros.MonMon_M_scaffold_103                    26585 83 -    437263 T
e Mirza_zaza.k141_952172                                      4682 69 -     37649 T
e Mirounga_angustirostris.MirAng_flattened_line_22144        62449 84 -     63350 T
e Miopithecus_ogouensis.k141_534055                           3817 77 -     28506 T
e Miniopterus_schreibersii.MinSch_scaffold_18080             32985 83 +     64694 T
e Miniopterus_natalensis.LDJU01000034.1                    1849109 83 +   8254450 T
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                13435 83 -     19307 T
e Microgale_talazaci.MicTal_scaffold_6613                    15418 9 -    145209 I
e Microcebus_murinus.CM007674.1                           18283328 70 -  93316391 T
e Mesoplodon_bidens.MesBid_scaffold_108144                    3080 83 +     10310 T
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365              6250 84 +     13704 T
e Megaderma_lyra.MegLyr_scaffold_4542                         6791 64 -    207569 T
e Marmota_marmota.CZRN01000018.1                          33097448 78 -  40650429 T
e Manis_pentadactyla.KN006162.1                              47010 81 -    317179 T
e Manis_javanica.JSZB01003497.1                              15621 81 +    737560 T
e Mandrillus_sphinx.Contig270                               346260 77 +    752769 T
e Mandrillus_leucophaeus.scaffold280                      23932082 77 -  24302211 T
e Macroglossus_sobrinus.MacSob_scaffold_8222                 87576 81 +     94391 T
e Macaca_tonkeana.k141_1498238                               20527 77 -     45290 T
e Macaca_thibetana.k99_7456                                  15730 77 -     15935 T
e Macaca_silenus.Contig273                                  324461 77 -    668171 T
e Macaca_siberu.k141_635500                                   1588 77 -     14993 T
e Macaca_radiata.k141_3680011                                 1787 77 +     20474 T
e Macaca_nigra.k141_1655396                                  74790 77 +     89720 T
e Macaca_nemestrina.KQ007038.1                            25452590 77 -  25927173 T
e Macaca_mulatta.NC_041758.1                             186834029 77 + 187317192 T
e Macaca_maura.k141_2733130                                  18941 77 +     37952 T
e Macaca_leonina.k141_3550399                                10374 77 -     29190 T
e Macaca_fuscata.k119_255327                                   921 77 -     23192 T
e Macaca_fascicularis.k141_814140                            75202 77 -    114318 T
e Macaca_cyclopis.k119_18836                                  7408 77 -     26193 T
e Macaca_assamensis.Contig5                               59670910 77 +  60120075 T
e Macaca_arctoides.k141_2326796                               1650 77 +     40492 T
e Lycaon_pictus.CM007581.1                                17951736 84 -  59628241 T
e Loxodonta_africana.GL010049.1                            4214528 82 -  43346337 T
e Lophocebus_aterrimus.ctg367                              1431466 78 +   1826925 T
e Lipotes_vexillifer.KE559953.1                             267490 80 -    662738 T
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3036119 84 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      22804 70 +     54090 T
e Lepilemur_ruficaudatus.k141_420445                         31660 70 -     32627 T
e Lepilemur_dorsalis.k141_577674                             24749 70 +     45836 T
e Lepilemur_ankaranensis.k141_596936                          6802 70 -     23766 T
e Lemur_catta.scaffold_24                                 15519761 0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12260 85 -     42476 T
e Kogia_breviceps.KogBre_flattened_line_192630                1679 83 -      3359 T
e Jaculus_jaculus.JH725527.1                               8271383 87 -   9596543 T
e Inia_geoffrensis.IniGeo_flattened_line_48101               22412 83 +     23964 T
e Indri_indri.k141_3655594                                   18168 70 +     31101 T
e Ictidomys_tridecemlineatus.JH393364.1                    7514598 78 -   7955117 T
e Hystrix_cristata.HysCri_scaffold_5660                      80936 83 +    135385 T
e Hylobates_pileatus_a.tarseq_633                            3330802 2 -  11177569 I
e Hylobates_pileatus_b.LG02                                     189537704 2 - 191637585 I
e Hylobates_klossii.k141_282416                              54257 2 +     67168 I
e Hylobates_agilis.k141_307679                               12252 2 -     15490 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19862 83 -    143317 T
e Hyaena_hyaena.HyaHya_flattened_line_26932                  40617 65 +     55795 T
e Hoolock_leuconedys.ctg274                                    429334 2 +    630532 I
e Hipposideros_galeritus.HipGal_scaffold_29171               39830 82 +     43066 T
e Hipposideros_armiger.JXIK01000431.1                       108389 82 +   1711038 T
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112051 83 +    128679 T
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 255 82 +       961 T
e Heterocephalus_glaber.JH602082.1                        20659393 83 +  22651954 T
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17496 83 +     36099 T
e Helogale_parvula.HelPar_flattened_line_2585               238152 65 +    327341 T
e Hapalemur_occidentalis.k141_907772                          9234 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402 0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298 0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517 0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   30090 75 +     78134 T
e Gorilla_beringei.k141_2022027                               1848 97 +      3305 I
e Glis_glis.GliGli_scaffold_19807                            30363 77 +     49224 T
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_56069               25478 83 +     26054 T
e Galagoides_demidoff.k141_31856                              3212 81 -      3432 T
e Fukomys_damarensis.KN121974.1                             848514 83 +   3816255 T
e Felis_nigripes.FelNig_flattened_line_20823                  5515 65 -     36744 T
e Felis_catus_fca126.CM031415.1                           20191990 65 + 205367284 T
e Eulemur_sanfordi.k141_1122526                               9432 0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267 0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247 0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321 0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369 0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369 0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184 0 -     25546 C
e Eulemur_collaris.k141_377015                                2154 0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453 0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             24808 83 -     44125 T
e Eschrichtius_robustus.EscRob_flattened_line_8968           10871 83 +    133382 T
e Erythrocebus_patas.Contig38                             21199940 77 -  21539334 T
e Erinaceus_europaeus.JH835339.1                           3325355 79 -   7059049 T
e Equus_przewalskii.KK951119.1                               29602 83 +    498745 T
e Equus_caballus.CM000403.2                               18527587 83 -  39960074 T
e Equus_asinus.JREZ01000139.1                              1279766 83 +   4378816 T
e Eptesicus_fuscus.JH977646.1                              2144081 83 -  14770903 T
e Enhydra_lutris.KZ291758.1                               16325783 81 -  41312741 T
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089018 82 +  10337057 T
e Elaphurus_davidianus.JRFZ01104969.1                       310296 83 +    607251 T
e Eidolon_helvum.KE759718.1                                   7430 82 +     11740 T
e Dolichotis_patagonum.DolPat_scaffold_30833                 31504 83 -     42551 T
e Dipodomys_stephensi.DipSte_scaffold_75855                  12030 83 +     14536 T
e Dipodomys_ordii.KN672350.1                              18895820 83 +  37912305 T
e Dinomys_branickii.DinBra_scaffold_21862                    34287 77 +     67921 T
e Diceros_bicornis.DicBicMic_scaffold_5955                    2499 83 +    198055 T
e Dicerorhinus_sumatrensis.PEKH010002091.1                  669424 83 +   1390856 T
e Desmodus_rotundus.KZ672289.1                             8627924 83 +  20541912 T
e Delphinapterus_leucas.KZ290073.1                        16811195 83 +  35494412 T
e Daubentonia_madagascariensis.ctg71                      12532896 70 -  12879189 T
e Dasypus_novemcinctus.JH564415.1                            61086 85 +   2246927 T
e Dasyprocta_punctata.DasPun_flattened_line_206793            1247 83 +      3576 T
e Cuniculus_paca.CunPac_flattened_line_231100                 2864 83 +      5455 T
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             24235 65 -     87169 T
e Crocidura_indochinensis.CroInd_scaffold_287352               379 52 +      4208 T
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          10509 80 -     20389 T
e Condylura_cristata.JH655891.1                           17545999 82 -  53390261 T
e Colobus_polykomos.k141_906115                              31777 104 +     84244 T
e Colobus_guereza.LG01                                   199944908 129 + 200372422 T
e Colobus_angolensis.KN981557.1                            1905238 77 +   2368649 T
e Choloepus_hoffmanni.KN194906.1                            170274 87 +    839153 T
e Choloepus_didactylus.ChoDid_scaffold_45914                 15175 87 +     19366 T
e Chlorocebus_sabaeus.CM001947.1                         135416709 77 + 135778131 T
e Chlorocebus_pygerythrus.k141_1025673                        9704 77 -     50209 T
e Chlorocebus_aethiops.ctg25                              18423261 77 -  18827391 T
e Chinchilla_lanigera.JH722012.1                           1248509 80 +   2543920 T
e Cheirogaleus_medius.k141_1055463                           12075 66 +     57038 T
e Cheirogaleus_major.k141_333249                             16726 66 -     52598 T
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            4816 68 -      6351 T
e Cercopithecus_roloway.k141_3180641                         39792 77 -     41420 T
e Cercopithecus_pogonias.k141_822820                          9298 77 +     17596 T
e Cercopithecus_petaurista.k141_807961                        9322 77 -     27947 T
e Cercopithecus_nictitans.k141_3278028                        1809 77 +      7159 T
e Cercopithecus_neglectus.k141_2526306                       34517 77 -     53127 T
e Cercopithecus_mona.ctg39                                21217397 77 -  21565898 T
e Cercopithecus_albogularis.ctg5                                38811706 77 +  39242232 T
e Cercopithecus_lowei.k141_457449                             9330 77 -     11289 T
e Cercopithecus_hamlyni.k141_187466                           9311 77 -     27936 T
e Cercopithecus_diana.k141_2427854                             976 77 +      9989 T
e Cercopithecus_cephus.k141_1078548                           6623 77 +     29689 T
e Cercopithecus_ascanius.k141_1024104                         3639 77 -     20310 T
e Cercocebus_torquatus.k141_3057011                           3493 77 +     27781 T
e Cercocebus_lunulatus.k141_3846941                           3263 77 +      8260 T
e Cercocebus_chrysogaster.k141_393940                         8844 77 -     19203 T
e Cercocebus_atys.KQ010504.1                               4470295 77 +   4669795 T
e Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2609 83 -      3715 T
e Cephalopachus_bancanus.k141_2037105                         4971 83 -      8605 T
e Cavia_tschudii.CavTsc_scaffold_8919                        98614 82 +    143979 T
e Cavia_porcellus.DS562891.1                              18359739 82 -  23407841 T
e Cavia_aperea.AVPZ01000300.1                             18347479 82 -  23392119 T
e Catagonus_wagneri.CatWag_scaffold_2839                     89266 124 +    217609 T
e Castor_canadensis.CasCan_scaffold_2074                    133658 80 +    179628 T
e Carollia_perspicillata.CarPer_scaffold_92756                2893 83 -     11696 T
e Carlito_syrichta.NW_007259797.1                           141055 83 -    496798 T
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18060012 83 -  44709034 T
e Capra_aegagrus.CM003241.1                               18829292 83 +  46296322 T
e Canis_lupus_orion.HG994398.1                            18496797 84 +  63665305 T
e Canis_lupus_familiaris.chr16                            17955496 84 -  59632846 T
e Canis_lupus_dingo.QKWQ01000480.1                         9031232 84 -   9314153 T
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    181845 84 -    185531 T
e CanFam4.chr16                                           17795788 84 -  60362399 T
e Camelus_ferus.KB017975.1                                  399658 83 -   1652518 T
e Camelus_dromedarius.KN272107.1                           2331382 83 -   7040546 T
e Camelus_bactrianus.KN276810.1                            9998918 83 -  17673402 T
e Bubalus_bubalis.KI419123.1                               2818467 83 +   4408762 T
e Bos_taurus.CM000203.6                                   18082978 83 +  45695690 T
e Bos_mutus.JH880303.1                                     1124900 83 -   1948126 T
e Bos_indicus.CM003047.1                                  20272340 83 +  48749331 T
e Bison_bison.KN261452.1                                    199135 83 -    288883 T
e Beatragus_hunteri.BeaHun_scaffold_50177                    26096 83 +     34529 T
e Balaenoptera_bonaerensis.DF707048.1                         2025 83 -     18090 T
e Balaenoptera_acutorostrata.KI537508.1                   15191559 83 +  23207421 T
e Avahi_peyrierasi.k141_1424874                              49933 67 +     85213 T
e Avahi_laniger.k141_765380                                  49308 67 -     92717 T
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  2475 83 +     43469 T
e Arctocebus_calabarensis.k141_288239                        14449 70 +     17124 T
e Aplodontia_rufa.AprRuf_scaffold_68852                       7278 78 +     20879 T
e Antilocapra_americana.AntAmePen_scaffold_12469             97626 83 -    100397 T
e Anoura_caudifer.AnoCau_scaffold_1412                      183123 83 +    412891 T
e Ammotragus_lervia.NIVO01071767.1                          675174 83 -   2318259 T
e Allochrocebus_solatus.k141_166128                            534 77 -     12518 T
e Allochrocebus_preussi.k141_310680                           9377 77 -      9772 T
e Allochrocebus_lhoesti.k141_4309873                          9251 77 -     28001 T
e Allenopithecus_nigroviridis.k141_3361533                    9324 77 -     52922 T
e Allactaga_bullata.AllBul_scaffold_9566                     65003 87 -     89534 T
e Ailurus_fulgens.LNAC01001112.1                             75224 84 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9507000 83 -  29979442 T
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           823290 65 -   1699592 T

a score=0.000000
s hg38.chrUn_KI270753v1                                       1199 16 +     62944 GTTGGAGGAACTCTAT
s Gorilla_beringei.k141_3596273                              10291 16 -     32273 GTTGGAGGAACTCTAT
i Gorilla_beringei.k141_3596273                          T 179 C 0
s Gorilla_gorilla.LT578341.1                             186332443 16 + 186649187 GTTGGAGGAACTCTAT
i Gorilla_gorilla.LT578341.1                             T 177 I 183
s Hoolock_leuconedys.ctg274                                    429336 16 +    630532 GTTAGAGGAAGTCTAT
i Hoolock_leuconedys.ctg274                                 I 2 C 0
s Hylobates_agilis.k141_307679                               12254 16 -     15490 GTTAGAGGAACTCTAT
i Hylobates_agilis.k141_307679                           I 2 C 0
s Hylobates_klossii.k141_282416                              54259 16 +     67168 GTTAAAGAAACTCTAT
i Hylobates_klossii.k141_282416                          I 2 C 0
s Hylobates_pileatus_b.LG02                                     189537706 16 - 191637585 GTTAGAGAAACTCTAT
i Hylobates_pileatus_b.LG02                                     I 2 C 0
s Hylobates_pileatus_a.tarseq_633                            3330804 16 -  11177569 GTTAGGGGAACTCTAT
i Hylobates_pileatus_a.tarseq_633                          I 2 C 0
s Pan_paniscus.KQ411613.1                                    38415 13 +     80009 ---AGAGGAACTCTAC
i Pan_paniscus.KQ411613.1                                T 267 I 1
s Pan_troglodytes.CM009242.2                             189137444 16 + 189151597 gttggaggaactctat
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Pongo_abelii.CM009266.2                                189125626 16 + 189387572 GTTAGAGGAACTCTAT
i Pongo_abelii.CM009266.2                                I 309 T 307
s Pongo_pygmaeus.ctg66                                     9565230 16 +   9816681 GTTAGAGGAACTCTAT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1087951 16 -   1523678 GTTAGAGCAACTCTAC
i Symphalangus_syndactylus.tarseq_199                    I 2 I 1
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Loris_tardigradus.ctg83                                   999532 66 +   6120653 T
e Loris_lydekkerianus.k141_2539221                             696 65 +     11245 T
e Perodicticus_potto.k141_1092580                             3050 70 +     25941 T
e Perodicticus_ibeanus.k141_855320                            4682 70 +     13100 T
e Ziphius_cavirostris.ZipCav_flattened_line_71469            11395 83 +     12536 T
e Zapus_hudsonius.ZapHud_scaffold_11398                      10016 86 +     63895 T
e Zalophus_californianus.ZalCal_flattened_line_63728          1860 84 +      2932 T
e Xerus_inauris.XerIna_scaffold_48378                        19735 78 -     24430 T
e Vulpes_lagopus.VulLag_flattened_line_30954                  7412 84 -     43706 T
e Vicugna_pacos.KN270157.1                                 5368407 83 -   5488506 T
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Ursus_maritimus.KK499267.1                               4846935 84 -   5085361 T
e Uropsilus_gracilis.UroGra_scaffold_97021                    1934 83 -      4736 T
e Tursiops_truncatus.MRVK01000835.1                       15737703 83 +  33153633 T
e Tupaia_tana.TupTan_flattened_line_97126                     3223 81 -     10553 T
e Tupaia_chinensis.KB320699.1                              2149632 109 +   4065304 T
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                    686 71 -      1748 T
e Trachypithecus_pileatus.k141_2007326                        2953 77 +     20839 T
e Trachypithecus_phayrei.ctg124                            5933708 77 +   6242583 T
e Trachypithecus_obscurus.k141_190785                        19611 77 +     32220 T
e Trachypithecus_melamera.k141_434728                         1293 77 +      9834 T
e Trachypithecus_leucocephalus.k141_587342                    2140 77 -     10723 T
e Trachypithecus_laotum.k141_907409                           3438 77 -     21137 T
e Trachypithecus_hatinhensis.k141_143409                      9702 77 -     18194 T
e Trachypithecus_germaini.k141_912491                         9762 77 -     27529 T
e Trachypithecus_geei.k141_277701                            42290 77 -     60166 T
e Trachypithecus_francoisi.k141_1412647                       2171 77 -     19997 T
e Trachypithecus_cristatus.k141_580354                        5741 74 +     19930 T
e Trachypithecus_crepusculus.k141_1194022                     9836 77 +     15221 T
e Trachypithecus_auratus.k141_722599                          5641 74 -     20410 T
e Tonatia_saurophila.TonSau_scaffold_294                     78979 83 +    610378 T
e Tolypeutes_matacus.TolMat_scaffold_228639                   1874 68 +      8208 T
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103202 82 +    114563 T
e Theropithecus_gelada.CM009954.1                        186422913 77 + 186847797 T
e Tarsius_wallacei.k141_780063                               14975 83 +     25099 T
e Tarsius_lariang.k141_2201908                               10670 83 +     70052 T
e Tapirus_terrestris.TapTer_scaffold_755                    383676 83 +    539355 T
e Tapirus_indicus.TapInd_scaffold_9301                      115221 83 -    156842 T
e Tamandua_tetradactyla.TamTet_scaffold_1782                 69488 87 +    116680 T
e Tadarida_brasiliensis.TadBra_scaffold_25820                 6838 82 +     41958 T
e Sus_scrofa.CM000828.4                                   62882475 70 -  69701581 T
e Suricata_suricatta.SurSur_flattened_line_6629              14222 65 -    196729 T
e Spilogale_gracilis.SpiGra_flattened_line_13525             27234 83 +     97271 T
e Spermophilus_dauricus.KZ294078.1                         1948240 78 -   3870691 T
e Sorex_araneus.JH798187.1                                13647036 64 -  18376816 T
e Solenodon_paradoxus.SolPar_flattened_line_5840            187706 83 -    191337 T
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Semnopithecus_vetulus.k141_1200928                          9907 77 +     15514 T
e Semnopithecus_schistaceus.k141_1584426                      1647 77 +      7198 T
e Semnopithecus_priam.k141_638794                             1585 77 -     19483 T
e Semnopithecus_johnii.k141_670120                            2063 77 +     27826 T
e Semnopithecus_hypoleucos.k141_1615806                      21539 77 +     39453 T
e Semnopithecus_entellus.k141_11662                          14334 77 -     19888 T
e Scalopus_aquaticus.ScaAqu_scaffold_662                    151381 45 -    313613 T
e Saiga_tatarica.SaiTat_scaffold_373180                       3569 82 +      4321 T
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                84685 82 -     96226 T
e Rhinopithecus_strykeri.ctg102                            7666510 297 +   7961872 T
e Rhinopithecus_roxellana.NC_044550.1                     91230862 357 - 195417433 T
e Rhinopithecus_bieti.k119_217274                             1505 377 -     11128 T
e Rhinolophus_sinicus.LVEH01000134.1                        366934 83 -   3329780 T
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4916 82 +     55207 T
e Pygathrix_nigripes_a.k141_215492                              9792 77 -     72585 T
e Pygathrix_nigripes_b.ctg100                                 7603953 77 +   7812017 T
e Pygathrix_cinerea.k141_1153803                              9819 77 -     91421 T
e Puma_concolor.QAVW01001104.1                            20270304 65 -  38429054 T
e Pteropus_vampyrus.KN534172.1                                1636 81 -      8028 T
e Pteropus_alecto.KB030862.1                              22973699 81 +  28871421 T
e Pteronura_brasiliensis.PteBra_flattened_line_31117         36692 84 +     42204 T
e Pteronotus_parnellii.KE909381.1                            11228 88 -     21811 T
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Propithecus_verreauxi.k141_956661                            427 67 -      6182 T
e Propithecus_tattersalli.k141_790011                        24182 67 -     67325 T
e Propithecus_perrieri.k141_1200571                            370 67 -     24134 T
e Propithecus_edwardsi.k141_1176054                          22187 67 +     35766 T
e Propithecus_diadema.k141_357118                              829 67 +      4256 T
e Propithecus_coronatus.k141_347390                          24668 67 +     38485 T
e Propithecus_coquerelli.NW_012148875.1                     986379 67 +   2598838 T
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10016 82 -     22811 T
e Presbytis_mitrata.k141_2342859                              9817 77 +     10147 T
e Presbytis_comata.k141_677006                               67990 77 -     81375 T
e Platanista_gangetica.PlaMin_flattened_line_32310           34209 83 +     35617 T
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              455 83 +     22620 T
e Piliocolobus_tephrosceles.PDMG02000141.1                14290710 77 -  14605196 T
e Piliocolobus_kirkii.k141_448987                            34489 77 +     51399 T
e Piliocolobus_gordonorum.k141_381342                        33073 77 +     89929 T
e Piliocolobus_badius.k141_1234363                           38346 77 +     62158 T
e Phocoena_phocoena.PhoPho_flattened_line_24159               8503 83 +     63832 T
e Petromus_typicus.PetTyp_scaffold_42190                     25860 81 -     29689 T
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25316 22 +     32600 T
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8872 65 -     78924 T
e Papio_ursinus.k141_3428135                                  3490 77 +      9205 T
e Papio_papio.k141_802527                                     3591 59 +     27711 T
e Papio_kindae.k141_1936966                                    305 170 +     41871 T
e Papio_hamadryas.Contig39                                20558088 77 +  20919399 T
e Papio_cynocephalus.k141_4307930                             1562 170 +     20448 T
e Papio_anubis.CM001495.2                                183437404 77 + 183742232 T
e Pantholops_hodgsonii.KE114653.1                          1264381 83 -   2937107 T
e Panthera_tigris.KE722367.1                               4716993 65 -   8748460 T
e Panthera_pardus.KV860321.1                                259846 65 +  18783137 T
e Panthera_onca.PanOnc_flattened_line_3271                  147137 65 +    230217 T
e Ovis_canadensis.OviCan_scaffold_2572                      173448 83 -    191736 T
e Ovis_aries.CM001607.2                                   17585027 83 +  44047080 T
e Otocyon_megalotis.JAEUCK010005147.1                       458751 84 -    559221 T
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               6853 82 -     18566 T
e Orcinus_orca.KB316932.1                                  2781456 83 -  10937097 T
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144668 82 +    630418 T
e Odobenus_rosmarus.KB229312.1                              500738 84 -   2017862 T
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1355765 71 +   3988456 T
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744927 65 + 199412804 T
e Nycticebus_coucang.k141_5327727                             2186 65 +      8486 T
e Nycticebus_bengalensis.LG01                            102574500 65 - 196305487 T
e Nyctereutes_procyonoides.CAJHUB010000658.1               9145997 84 -   9404916 T
e Noctilio_leporinus.NocLep_scaffold_251                    756405 82 +    783361 T
e Neophocaena_asiaeorientalis.KZ687982.1                   5865541 83 +   7148211 T
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nasalis_larvatus.k141_413338                                9830 77 +     21681 T
e Nannospalax_galili.KL204047.1                            2025524 76 -   3037898 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186126 87 +    196477 T
e Myotis_myotis.MyoMyo_scaffold_28916                        32630 72 +     33610 T
e Myotis_lucifugus.GL429869.1                              3902071 72 -   4330536 T
e Myotis_davidii.KB100139.1                                1585862 72 -   6019432 T
e Myotis_brandtii.KE162005.1                                278305 72 -  10118263 T
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               297681 84 -  14710649 T
e Muscardinus_avellanarius.MusAve_scaffold_82313              2356 77 +     14296 T
e Murina_feae.MurFea_scaffold_85699                           5135 74 +     14753 T
e Mungos_mungo.MunMun_flattened_line_23663                   31353 65 +     37127 T
e Moschus_moschiferus.MosMos_scaffold_61429                  27434 81 -     27816 T
e Mormoops_blainvillei.MorMeg_scaffold_1417                 137841 83 -    366855 T
e Monodon_monoceros.MonMon_M_scaffold_103                    26585 83 -    437263 T
e Mirza_zaza.k141_952172                                      4682 69 -     37649 T
e Mirounga_angustirostris.MirAng_flattened_line_22144        62449 84 -     63350 T
e Miopithecus_ogouensis.k141_534055                           3817 77 -     28506 T
e Miniopterus_schreibersii.MinSch_scaffold_18080             32985 83 +     64694 T
e Miniopterus_natalensis.LDJU01000034.1                    1849109 83 +   8254450 T
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                13435 83 -     19307 T
e Microgale_talazaci.MicTal_scaffold_6613                    15418  9 -    145209 I
e Microcebus_murinus.CM007674.1                           18283328 70 -  93316391 T
e Mesoplodon_bidens.MesBid_scaffold_108144                    3080 83 +     10310 T
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365              6250 84 +     13704 T
e Megaderma_lyra.MegLyr_scaffold_4542                         6791 64 -    207569 T
e Marmota_marmota.CZRN01000018.1                          33097448 78 -  40650429 T
e Manis_pentadactyla.KN006162.1                              47010 81 -    317179 T
e Manis_javanica.JSZB01003497.1                              15621 81 +    737560 T
e Mandrillus_sphinx.Contig270                               346260 77 +    752769 T
e Mandrillus_leucophaeus.scaffold280                      23932082 77 -  24302211 T
e Macroglossus_sobrinus.MacSob_scaffold_8222                 87576 81 +     94391 T
e Macaca_tonkeana.k141_1498238                               20527 77 -     45290 T
e Macaca_thibetana.k99_7456                                  15730 77 -     15935 T
e Macaca_silenus.Contig273                                  324461 77 -    668171 T
e Macaca_siberu.k141_635500                                   1588 77 -     14993 T
e Macaca_radiata.k141_3680011                                 1787 77 +     20474 T
e Macaca_nigra.k141_1655396                                  74790 77 +     89720 T
e Macaca_nemestrina.KQ007038.1                            25452590 77 -  25927173 T
e Macaca_mulatta.NC_041758.1                             186834029 77 + 187317192 T
e Macaca_maura.k141_2733130                                  18941 77 +     37952 T
e Macaca_leonina.k141_3550399                                10374 77 -     29190 T
e Macaca_fuscata.k119_255327                                   921 77 -     23192 T
e Macaca_fascicularis.k141_814140                            75202 77 -    114318 T
e Macaca_cyclopis.k119_18836                                  7408 77 -     26193 T
e Macaca_assamensis.Contig5                               59670910 77 +  60120075 T
e Macaca_arctoides.k141_2326796                               1650 77 +     40492 T
e Lycaon_pictus.CM007581.1                                17951736 84 -  59628241 T
e Loxodonta_africana.GL010049.1                            4214528 82 -  43346337 T
e Lophocebus_aterrimus.ctg367                              1431466 78 +   1826925 T
e Lipotes_vexillifer.KE559953.1                             267490 80 -    662738 T
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3036119 84 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      22804 70 +     54090 T
e Lepilemur_ruficaudatus.k141_420445                         31660 70 -     32627 T
e Lepilemur_dorsalis.k141_577674                             24749 70 +     45836 T
e Lepilemur_ankaranensis.k141_596936                          6802 70 -     23766 T
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12260 85 -     42476 T
e Kogia_breviceps.KogBre_flattened_line_192630                1679 83 -      3359 T
e Jaculus_jaculus.JH725527.1                               8271383 87 -   9596543 T
e Inia_geoffrensis.IniGeo_flattened_line_48101               22412 83 +     23964 T
e Indri_indri.k141_3655594                                   18168 70 +     31101 T
e Ictidomys_tridecemlineatus.JH393364.1                    7514598 78 -   7955117 T
e Hystrix_cristata.HysCri_scaffold_5660                      80936 83 +    135385 T
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19862 83 -    143317 T
e Hyaena_hyaena.HyaHya_flattened_line_26932                  40617 65 +     55795 T
e Hipposideros_galeritus.HipGal_scaffold_29171               39830 82 +     43066 T
e Hipposideros_armiger.JXIK01000431.1                       108389 82 +   1711038 T
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112051 83 +    128679 T
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 255 82 +       961 T
e Heterocephalus_glaber.JH602082.1                        20659393 83 +  22651954 T
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17496 83 +     36099 T
e Helogale_parvula.HelPar_flattened_line_2585               238152 65 +    327341 T
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   30090 75 +     78134 T
e Glis_glis.GliGli_scaffold_19807                            30363 77 +     49224 T
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_56069               25478 83 +     26054 T
e Galagoides_demidoff.k141_31856                              3212 81 -      3432 T
e Fukomys_damarensis.KN121974.1                             848514 83 +   3816255 T
e Felis_nigripes.FelNig_flattened_line_20823                  5515 65 -     36744 T
e Felis_catus_fca126.CM031415.1                           20191990 65 + 205367284 T
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             24808 83 -     44125 T
e Eschrichtius_robustus.EscRob_flattened_line_8968           10871 83 +    133382 T
e Erythrocebus_patas.Contig38                             21199940 77 -  21539334 T
e Erinaceus_europaeus.JH835339.1                           3325355 79 -   7059049 T
e Equus_przewalskii.KK951119.1                               29602 83 +    498745 T
e Equus_caballus.CM000403.2                               18527587 83 -  39960074 T
e Equus_asinus.JREZ01000139.1                              1279766 83 +   4378816 T
e Eptesicus_fuscus.JH977646.1                              2144081 83 -  14770903 T
e Enhydra_lutris.KZ291758.1                               16325783 81 -  41312741 T
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089018 82 +  10337057 T
e Elaphurus_davidianus.JRFZ01104969.1                       310296 83 +    607251 T
e Eidolon_helvum.KE759718.1                                   7430 82 +     11740 T
e Dolichotis_patagonum.DolPat_scaffold_30833                 31504 83 -     42551 T
e Dipodomys_stephensi.DipSte_scaffold_75855                  12030 83 +     14536 T
e Dipodomys_ordii.KN672350.1                              18895820 83 +  37912305 T
e Dinomys_branickii.DinBra_scaffold_21862                    34287 77 +     67921 T
e Diceros_bicornis.DicBicMic_scaffold_5955                    2499 83 +    198055 T
e Dicerorhinus_sumatrensis.PEKH010002091.1                  669424 83 +   1390856 T
e Desmodus_rotundus.KZ672289.1                             8627924 83 +  20541912 T
e Delphinapterus_leucas.KZ290073.1                        16811195 83 +  35494412 T
e Daubentonia_madagascariensis.ctg71                      12532896 70 -  12879189 T
e Dasypus_novemcinctus.JH564415.1                            61086 85 +   2246927 T
e Dasyprocta_punctata.DasPun_flattened_line_206793            1247 83 +      3576 T
e Cuniculus_paca.CunPac_flattened_line_231100                 2864 83 +      5455 T
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             24235 65 -     87169 T
e Crocidura_indochinensis.CroInd_scaffold_287352               379 52 +      4208 T
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          10509 80 -     20389 T
e Condylura_cristata.JH655891.1                           17545999 82 -  53390261 T
e Colobus_polykomos.k141_906115                              31777 104 +     84244 T
e Colobus_guereza.LG01                                   199944908 129 + 200372422 T
e Colobus_angolensis.KN981557.1                            1905238 77 +   2368649 T
e Choloepus_hoffmanni.KN194906.1                            170274 87 +    839153 T
e Choloepus_didactylus.ChoDid_scaffold_45914                 15175 87 +     19366 T
e Chlorocebus_sabaeus.CM001947.1                         135416709 77 + 135778131 T
e Chlorocebus_pygerythrus.k141_1025673                        9704 77 -     50209 T
e Chlorocebus_aethiops.ctg25                              18423261 77 -  18827391 T
e Chinchilla_lanigera.JH722012.1                           1248509 80 +   2543920 T
e Cheirogaleus_medius.k141_1055463                           12075 66 +     57038 T
e Cheirogaleus_major.k141_333249                             16726 66 -     52598 T
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            4816 68 -      6351 T
e Cercopithecus_roloway.k141_3180641                         39792 77 -     41420 T
e Cercopithecus_pogonias.k141_822820                          9298 77 +     17596 T
e Cercopithecus_petaurista.k141_807961                        9322 77 -     27947 T
e Cercopithecus_nictitans.k141_3278028                        1809 77 +      7159 T
e Cercopithecus_neglectus.k141_2526306                       34517 77 -     53127 T
e Cercopithecus_mona.ctg39                                21217397 77 -  21565898 T
e Cercopithecus_albogularis.ctg5                                38811706 77 +  39242232 T
e Cercopithecus_lowei.k141_457449                             9330 77 -     11289 T
e Cercopithecus_hamlyni.k141_187466                           9311 77 -     27936 T
e Cercopithecus_diana.k141_2427854                             976 77 +      9989 T
e Cercopithecus_cephus.k141_1078548                           6623 77 +     29689 T
e Cercopithecus_ascanius.k141_1024104                         3639 77 -     20310 T
e Cercocebus_torquatus.k141_3057011                           3493 77 +     27781 T
e Cercocebus_lunulatus.k141_3846941                           3263 77 +      8260 T
e Cercocebus_chrysogaster.k141_393940                         8844 77 -     19203 T
e Cercocebus_atys.KQ010504.1                               4470295 77 +   4669795 T
e Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2609 83 -      3715 T
e Cephalopachus_bancanus.k141_2037105                         4971 83 -      8605 T
e Cavia_tschudii.CavTsc_scaffold_8919                        98614 82 +    143979 T
e Cavia_porcellus.DS562891.1                              18359739 82 -  23407841 T
e Cavia_aperea.AVPZ01000300.1                             18347479 82 -  23392119 T
e Catagonus_wagneri.CatWag_scaffold_2839                     89266 124 +    217609 T
e Castor_canadensis.CasCan_scaffold_2074                    133658 80 +    179628 T
e Carollia_perspicillata.CarPer_scaffold_92756                2893 83 -     11696 T
e Carlito_syrichta.NW_007259797.1                           141055 83 -    496798 T
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18060012 83 -  44709034 T
e Capra_aegagrus.CM003241.1                               18829292 83 +  46296322 T
e Canis_lupus_orion.HG994398.1                            18496797 84 +  63665305 T
e Canis_lupus_familiaris.chr16                            17955496 84 -  59632846 T
e Canis_lupus_dingo.QKWQ01000480.1                         9031232 84 -   9314153 T
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    181845 84 -    185531 T
e CanFam4.chr16                                           17795788 84 -  60362399 T
e Camelus_ferus.KB017975.1                                  399658 83 -   1652518 T
e Camelus_dromedarius.KN272107.1                           2331382 83 -   7040546 T
e Camelus_bactrianus.KN276810.1                            9998918 83 -  17673402 T
e Bubalus_bubalis.KI419123.1                               2818467 83 +   4408762 T
e Bos_taurus.CM000203.6                                   18082978 83 +  45695690 T
e Bos_mutus.JH880303.1                                     1124900 83 -   1948126 T
e Bos_indicus.CM003047.1                                  20272340 83 +  48749331 T
e Bison_bison.KN261452.1                                    199135 83 -    288883 T
e Beatragus_hunteri.BeaHun_scaffold_50177                    26096 83 +     34529 T
e Balaenoptera_bonaerensis.DF707048.1                         2025 83 -     18090 T
e Balaenoptera_acutorostrata.KI537508.1                   15191559 83 +  23207421 T
e Avahi_peyrierasi.k141_1424874                              49933 67 +     85213 T
e Avahi_laniger.k141_765380                                  49308 67 -     92717 T
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  2475 83 +     43469 T
e Arctocebus_calabarensis.k141_288239                        14449 70 +     17124 T
e Aplodontia_rufa.AprRuf_scaffold_68852                       7278 78 +     20879 T
e Antilocapra_americana.AntAmePen_scaffold_12469             97626 83 -    100397 T
e Anoura_caudifer.AnoCau_scaffold_1412                      183123 83 +    412891 T
e Ammotragus_lervia.NIVO01071767.1                          675174 83 -   2318259 T
e Allochrocebus_solatus.k141_166128                            534 77 -     12518 T
e Allochrocebus_preussi.k141_310680                           9377 77 -      9772 T
e Allochrocebus_lhoesti.k141_4309873                          9251 77 -     28001 T
e Allenopithecus_nigroviridis.k141_3361533                    9324 77 -     52922 T
e Allactaga_bullata.AllBul_scaffold_9566                     65003 87 -     89534 T
e Ailurus_fulgens.LNAC01001112.1                             75224 84 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9507000 83 -  29979442 T
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           823290 65 -   1699592 T

a score=0.000000
s hg38.chrUn_KI270753v1                                       1215 1 +     62944 A
s Pan_troglodytes.CM009242.2                             189137460 1 + 189151597 a
i Pan_troglodytes.CM009242.2                             C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Loris_tardigradus.ctg83                                   999532 66 +   6120653 T
e Loris_lydekkerianus.k141_2539221                             696 65 +     11245 T
e Perodicticus_potto.k141_1092580                             3050 70 +     25941 T
e Perodicticus_ibeanus.k141_855320                            4682 70 +     13100 T
e Ziphius_cavirostris.ZipCav_flattened_line_71469            11395 83 +     12536 T
e Zapus_hudsonius.ZapHud_scaffold_11398                      10016 86 +     63895 T
e Zalophus_californianus.ZalCal_flattened_line_63728          1860 84 +      2932 T
e Xerus_inauris.XerIna_scaffold_48378                        19735 78 -     24430 T
e Vulpes_lagopus.VulLag_flattened_line_30954                  7412 84 -     43706 T
e Vicugna_pacos.KN270157.1                                 5368407 83 -   5488506 T
e Varecia_variegata.k141_1128296                              7155 0 +     24756 C
e Varecia_rubra.k141_590885                                   7107 0 +     50397 C
e Ursus_maritimus.KK499267.1                               4846935 84 -   5085361 T
e Uropsilus_gracilis.UroGra_scaffold_97021                    1934 83 -      4736 T
e Tursiops_truncatus.MRVK01000835.1                       15737703 83 +  33153633 T
e Tupaia_tana.TupTan_flattened_line_97126                     3223 81 -     10553 T
e Tupaia_chinensis.KB320699.1                              2149632 109 +   4065304 T
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                    686 71 -      1748 T
e Trachypithecus_pileatus.k141_2007326                        2953 77 +     20839 T
e Trachypithecus_phayrei.ctg124                            5933708 77 +   6242583 T
e Trachypithecus_obscurus.k141_190785                        19611 77 +     32220 T
e Trachypithecus_melamera.k141_434728                         1293 77 +      9834 T
e Trachypithecus_leucocephalus.k141_587342                    2140 77 -     10723 T
e Trachypithecus_laotum.k141_907409                           3438 77 -     21137 T
e Trachypithecus_hatinhensis.k141_143409                      9702 77 -     18194 T
e Trachypithecus_germaini.k141_912491                         9762 77 -     27529 T
e Trachypithecus_geei.k141_277701                            42290 77 -     60166 T
e Trachypithecus_francoisi.k141_1412647                       2171 77 -     19997 T
e Trachypithecus_cristatus.k141_580354                        5741 74 +     19930 T
e Trachypithecus_crepusculus.k141_1194022                     9836 77 +     15221 T
e Trachypithecus_auratus.k141_722599                          5641 74 -     20410 T
e Tonatia_saurophila.TonSau_scaffold_294                     78979 83 +    610378 T
e Tolypeutes_matacus.TolMat_scaffold_228639                   1874 68 +      8208 T
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103202 82 +    114563 T
e Theropithecus_gelada.CM009954.1                        186422913 77 + 186847797 T
e Tarsius_wallacei.k141_780063                               14975 83 +     25099 T
e Tarsius_lariang.k141_2201908                               10670 83 +     70052 T
e Tapirus_terrestris.TapTer_scaffold_755                    383676 83 +    539355 T
e Tapirus_indicus.TapInd_scaffold_9301                      115221 83 -    156842 T
e Tamandua_tetradactyla.TamTet_scaffold_1782                 69488 87 +    116680 T
e Tadarida_brasiliensis.TadBra_scaffold_25820                 6838 82 +     41958 T
e Symphalangus_syndactylus.tarseq_199                      1087967 1 -   1523678 I
e Sus_scrofa.CM000828.4                                   62882475 70 -  69701581 T
e Suricata_suricatta.SurSur_flattened_line_6629              14222 65 -    196729 T
e Spilogale_gracilis.SpiGra_flattened_line_13525             27234 83 +     97271 T
e Spermophilus_dauricus.KZ294078.1                         1948240 78 -   3870691 T
e Sorex_araneus.JH798187.1                                13647036 64 -  18376816 T
e Solenodon_paradoxus.SolPar_flattened_line_5840            187706 83 -    191337 T
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Semnopithecus_vetulus.k141_1200928                          9907 77 +     15514 T
e Semnopithecus_schistaceus.k141_1584426                      1647 77 +      7198 T
e Semnopithecus_priam.k141_638794                             1585 77 -     19483 T
e Semnopithecus_johnii.k141_670120                            2063 77 +     27826 T
e Semnopithecus_hypoleucos.k141_1615806                      21539 77 +     39453 T
e Semnopithecus_entellus.k141_11662                          14334 77 -     19888 T
e Scalopus_aquaticus.ScaAqu_scaffold_662                    151381 45 -    313613 T
e Saiga_tatarica.SaiTat_scaffold_373180                       3569 82 +      4321 T
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                84685 82 -     96226 T
e Rhinopithecus_strykeri.ctg102                            7666510 297 +   7961872 T
e Rhinopithecus_roxellana.NC_044550.1                     91230862 357 - 195417433 T
e Rhinopithecus_bieti.k119_217274                             1505 377 -     11128 T
e Rhinolophus_sinicus.LVEH01000134.1                        366934 83 -   3329780 T
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4916 82 +     55207 T
e Pygathrix_nigripes_a.k141_215492                              9792 77 -     72585 T
e Pygathrix_nigripes_b.ctg100                                 7603953 77 +   7812017 T
e Pygathrix_cinerea.k141_1153803                              9819 77 -     91421 T
e Puma_concolor.QAVW01001104.1                            20270304 65 -  38429054 T
e Pteropus_vampyrus.KN534172.1                                1636 81 -      8028 T
e Pteropus_alecto.KB030862.1                              22973699 81 +  28871421 T
e Pteronura_brasiliensis.PteBra_flattened_line_31117         36692 84 +     42204 T
e Pteronotus_parnellii.KE909381.1                            11228 88 -     21811 T
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Propithecus_verreauxi.k141_956661                            427 67 -      6182 T
e Propithecus_tattersalli.k141_790011                        24182 67 -     67325 T
e Propithecus_perrieri.k141_1200571                            370 67 -     24134 T
e Propithecus_edwardsi.k141_1176054                          22187 67 +     35766 T
e Propithecus_diadema.k141_357118                              829 67 +      4256 T
e Propithecus_coronatus.k141_347390                          24668 67 +     38485 T
e Propithecus_coquerelli.NW_012148875.1                     986379 67 +   2598838 T
e Prolemur_simus.MPIZ01000396.1                            2592414 0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10016 82 -     22811 T
e Presbytis_mitrata.k141_2342859                              9817 77 +     10147 T
e Presbytis_comata.k141_677006                               67990 77 -     81375 T
e Pongo_pygmaeus.ctg66                                     9565246 0 +   9816681 C
e Pongo_abelii.CM009266.2                                189125642 307 + 189387572 T
e Platanista_gangetica.PlaMin_flattened_line_32310           34209 83 +     35617 T
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              455 83 +     22620 T
e Piliocolobus_tephrosceles.PDMG02000141.1                14290710 77 -  14605196 T
e Piliocolobus_kirkii.k141_448987                            34489 77 +     51399 T
e Piliocolobus_gordonorum.k141_381342                        33073 77 +     89929 T
e Piliocolobus_badius.k141_1234363                           38346 77 +     62158 T
e Phocoena_phocoena.PhoPho_flattened_line_24159               8503 83 +     63832 T
e Petromus_typicus.PetTyp_scaffold_42190                     25860 81 -     29689 T
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25316 22 +     32600 T
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8872 65 -     78924 T
e Papio_ursinus.k141_3428135                                  3490 77 +      9205 T
e Papio_papio.k141_802527                                     3591 59 +     27711 T
e Papio_kindae.k141_1936966                                    305 170 +     41871 T
e Papio_hamadryas.Contig39                                20558088 77 +  20919399 T
e Papio_cynocephalus.k141_4307930                             1562 170 +     20448 T
e Papio_anubis.CM001495.2                                183437404 77 + 183742232 T
e Pantholops_hodgsonii.KE114653.1                          1264381 83 -   2937107 T
e Panthera_tigris.KE722367.1                               4716993 65 -   8748460 T
e Panthera_pardus.KV860321.1                                259846 65 +  18783137 T
e Panthera_onca.PanOnc_flattened_line_3271                  147137 65 +    230217 T
e Pan_paniscus.KQ411613.1                                    38428 1 +     80009 I
e Ovis_canadensis.OviCan_scaffold_2572                      173448 83 -    191736 T
e Ovis_aries.CM001607.2                                   17585027 83 +  44047080 T
e Otocyon_megalotis.JAEUCK010005147.1                       458751 84 -    559221 T
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               6853 82 -     18566 T
e Orcinus_orca.KB316932.1                                  2781456 83 -  10937097 T
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144668 82 +    630418 T
e Odobenus_rosmarus.KB229312.1                              500738 84 -   2017862 T
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1355765 71 +   3988456 T
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744927 65 + 199412804 T
e Nycticebus_coucang.k141_5327727                             2186 65 +      8486 T
e Nycticebus_bengalensis.LG01                            102574500 65 - 196305487 T
e Nyctereutes_procyonoides.CAJHUB010000658.1               9145997 84 -   9404916 T
e Noctilio_leporinus.NocLep_scaffold_251                    756405 82 +    783361 T
e Neophocaena_asiaeorientalis.KZ687982.1                   5865541 83 +   7148211 T
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nasalis_larvatus.k141_413338                                9830 77 +     21681 T
e Nannospalax_galili.KL204047.1                            2025524 76 -   3037898 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186126 87 +    196477 T
e Myotis_myotis.MyoMyo_scaffold_28916                        32630 72 +     33610 T
e Myotis_lucifugus.GL429869.1                              3902071 72 -   4330536 T
e Myotis_davidii.KB100139.1                                1585862 72 -   6019432 T
e Myotis_brandtii.KE162005.1                                278305 72 -  10118263 T
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               297681 84 -  14710649 T
e Muscardinus_avellanarius.MusAve_scaffold_82313              2356 77 +     14296 T
e Murina_feae.MurFea_scaffold_85699                           5135 74 +     14753 T
e Mungos_mungo.MunMun_flattened_line_23663                   31353 65 +     37127 T
e Moschus_moschiferus.MosMos_scaffold_61429                  27434 81 -     27816 T
e Mormoops_blainvillei.MorMeg_scaffold_1417                 137841 83 -    366855 T
e Monodon_monoceros.MonMon_M_scaffold_103                    26585 83 -    437263 T
e Mirza_zaza.k141_952172                                      4682 69 -     37649 T
e Mirounga_angustirostris.MirAng_flattened_line_22144        62449 84 -     63350 T
e Miopithecus_ogouensis.k141_534055                           3817 77 -     28506 T
e Miniopterus_schreibersii.MinSch_scaffold_18080             32985 83 +     64694 T
e Miniopterus_natalensis.LDJU01000034.1                    1849109 83 +   8254450 T
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                13435 83 -     19307 T
e Microgale_talazaci.MicTal_scaffold_6613                    15418 9 -    145209 I
e Microcebus_murinus.CM007674.1                           18283328 70 -  93316391 T
e Mesoplodon_bidens.MesBid_scaffold_108144                    3080 83 +     10310 T
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365              6250 84 +     13704 T
e Megaderma_lyra.MegLyr_scaffold_4542                         6791 64 -    207569 T
e Marmota_marmota.CZRN01000018.1                          33097448 78 -  40650429 T
e Manis_pentadactyla.KN006162.1                              47010 81 -    317179 T
e Manis_javanica.JSZB01003497.1                              15621 81 +    737560 T
e Mandrillus_sphinx.Contig270                               346260 77 +    752769 T
e Mandrillus_leucophaeus.scaffold280                      23932082 77 -  24302211 T
e Macroglossus_sobrinus.MacSob_scaffold_8222                 87576 81 +     94391 T
e Macaca_tonkeana.k141_1498238                               20527 77 -     45290 T
e Macaca_thibetana.k99_7456                                  15730 77 -     15935 T
e Macaca_silenus.Contig273                                  324461 77 -    668171 T
e Macaca_siberu.k141_635500                                   1588 77 -     14993 T
e Macaca_radiata.k141_3680011                                 1787 77 +     20474 T
e Macaca_nigra.k141_1655396                                  74790 77 +     89720 T
e Macaca_nemestrina.KQ007038.1                            25452590 77 -  25927173 T
e Macaca_mulatta.NC_041758.1                             186834029 77 + 187317192 T
e Macaca_maura.k141_2733130                                  18941 77 +     37952 T
e Macaca_leonina.k141_3550399                                10374 77 -     29190 T
e Macaca_fuscata.k119_255327                                   921 77 -     23192 T
e Macaca_fascicularis.k141_814140                            75202 77 -    114318 T
e Macaca_cyclopis.k119_18836                                  7408 77 -     26193 T
e Macaca_assamensis.Contig5                               59670910 77 +  60120075 T
e Macaca_arctoides.k141_2326796                               1650 77 +     40492 T
e Lycaon_pictus.CM007581.1                                17951736 84 -  59628241 T
e Loxodonta_africana.GL010049.1                            4214528 82 -  43346337 T
e Lophocebus_aterrimus.ctg367                              1431466 78 +   1826925 T
e Lipotes_vexillifer.KE559953.1                             267490 80 -    662738 T
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3036119 84 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      22804 70 +     54090 T
e Lepilemur_ruficaudatus.k141_420445                         31660 70 -     32627 T
e Lepilemur_dorsalis.k141_577674                             24749 70 +     45836 T
e Lepilemur_ankaranensis.k141_596936                          6802 70 -     23766 T
e Lemur_catta.scaffold_24                                 15519761 0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12260 85 -     42476 T
e Kogia_breviceps.KogBre_flattened_line_192630                1679 83 -      3359 T
e Jaculus_jaculus.JH725527.1                               8271383 87 -   9596543 T
e Inia_geoffrensis.IniGeo_flattened_line_48101               22412 83 +     23964 T
e Indri_indri.k141_3655594                                   18168 70 +     31101 T
e Ictidomys_tridecemlineatus.JH393364.1                    7514598 78 -   7955117 T
e Hystrix_cristata.HysCri_scaffold_5660                      80936 83 +    135385 T
e Hylobates_pileatus_a.tarseq_633                            3330820 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189537722 0 - 191637585 C
e Hylobates_klossii.k141_282416                              54275 0 +     67168 C
e Hylobates_agilis.k141_307679                               12270 0 -     15490 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19862 83 -    143317 T
e Hyaena_hyaena.HyaHya_flattened_line_26932                  40617 65 +     55795 T
e Hoolock_leuconedys.ctg274                                    429352 0 +    630532 C
e Hipposideros_galeritus.HipGal_scaffold_29171               39830 82 +     43066 T
e Hipposideros_armiger.JXIK01000431.1                       108389 82 +   1711038 T
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112051 83 +    128679 T
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 255 82 +       961 T
e Heterocephalus_glaber.JH602082.1                        20659393 83 +  22651954 T
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17496 83 +     36099 T
e Helogale_parvula.HelPar_flattened_line_2585               238152 65 +    327341 T
e Hapalemur_occidentalis.k141_907772                          9234 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402 0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298 0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517 0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   30090 75 +     78134 T
e Gorilla_gorilla.LT578341.1                             186332459 183 + 186649187 I
e Gorilla_beringei.k141_3596273                              10307 0 -     32273 C
e Glis_glis.GliGli_scaffold_19807                            30363 77 +     49224 T
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_56069               25478 83 +     26054 T
e Galagoides_demidoff.k141_31856                              3212 81 -      3432 T
e Fukomys_damarensis.KN121974.1                             848514 83 +   3816255 T
e Felis_nigripes.FelNig_flattened_line_20823                  5515 65 -     36744 T
e Felis_catus_fca126.CM031415.1                           20191990 65 + 205367284 T
e Eulemur_sanfordi.k141_1122526                               9432 0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267 0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247 0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321 0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369 0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369 0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184 0 -     25546 C
e Eulemur_collaris.k141_377015                                2154 0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453 0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             24808 83 -     44125 T
e Eschrichtius_robustus.EscRob_flattened_line_8968           10871 83 +    133382 T
e Erythrocebus_patas.Contig38                             21199940 77 -  21539334 T
e Erinaceus_europaeus.JH835339.1                           3325355 79 -   7059049 T
e Equus_przewalskii.KK951119.1                               29602 83 +    498745 T
e Equus_caballus.CM000403.2                               18527587 83 -  39960074 T
e Equus_asinus.JREZ01000139.1                              1279766 83 +   4378816 T
e Eptesicus_fuscus.JH977646.1                              2144081 83 -  14770903 T
e Enhydra_lutris.KZ291758.1                               16325783 81 -  41312741 T
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089018 82 +  10337057 T
e Elaphurus_davidianus.JRFZ01104969.1                       310296 83 +    607251 T
e Eidolon_helvum.KE759718.1                                   7430 82 +     11740 T
e Dolichotis_patagonum.DolPat_scaffold_30833                 31504 83 -     42551 T
e Dipodomys_stephensi.DipSte_scaffold_75855                  12030 83 +     14536 T
e Dipodomys_ordii.KN672350.1                              18895820 83 +  37912305 T
e Dinomys_branickii.DinBra_scaffold_21862                    34287 77 +     67921 T
e Diceros_bicornis.DicBicMic_scaffold_5955                    2499 83 +    198055 T
e Dicerorhinus_sumatrensis.PEKH010002091.1                  669424 83 +   1390856 T
e Desmodus_rotundus.KZ672289.1                             8627924 83 +  20541912 T
e Delphinapterus_leucas.KZ290073.1                        16811195 83 +  35494412 T
e Daubentonia_madagascariensis.ctg71                      12532896 70 -  12879189 T
e Dasypus_novemcinctus.JH564415.1                            61086 85 +   2246927 T
e Dasyprocta_punctata.DasPun_flattened_line_206793            1247 83 +      3576 T
e Cuniculus_paca.CunPac_flattened_line_231100                 2864 83 +      5455 T
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             24235 65 -     87169 T
e Crocidura_indochinensis.CroInd_scaffold_287352               379 52 +      4208 T
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          10509 80 -     20389 T
e Condylura_cristata.JH655891.1                           17545999 82 -  53390261 T
e Colobus_polykomos.k141_906115                              31777 104 +     84244 T
e Colobus_guereza.LG01                                   199944908 129 + 200372422 T
e Colobus_angolensis.KN981557.1                            1905238 77 +   2368649 T
e Choloepus_hoffmanni.KN194906.1                            170274 87 +    839153 T
e Choloepus_didactylus.ChoDid_scaffold_45914                 15175 87 +     19366 T
e Chlorocebus_sabaeus.CM001947.1                         135416709 77 + 135778131 T
e Chlorocebus_pygerythrus.k141_1025673                        9704 77 -     50209 T
e Chlorocebus_aethiops.ctg25                              18423261 77 -  18827391 T
e Chinchilla_lanigera.JH722012.1                           1248509 80 +   2543920 T
e Cheirogaleus_medius.k141_1055463                           12075 66 +     57038 T
e Cheirogaleus_major.k141_333249                             16726 66 -     52598 T
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            4816 68 -      6351 T
e Cercopithecus_roloway.k141_3180641                         39792 77 -     41420 T
e Cercopithecus_pogonias.k141_822820                          9298 77 +     17596 T
e Cercopithecus_petaurista.k141_807961                        9322 77 -     27947 T
e Cercopithecus_nictitans.k141_3278028                        1809 77 +      7159 T
e Cercopithecus_neglectus.k141_2526306                       34517 77 -     53127 T
e Cercopithecus_mona.ctg39                                21217397 77 -  21565898 T
e Cercopithecus_albogularis.ctg5                                38811706 77 +  39242232 T
e Cercopithecus_lowei.k141_457449                             9330 77 -     11289 T
e Cercopithecus_hamlyni.k141_187466                           9311 77 -     27936 T
e Cercopithecus_diana.k141_2427854                             976 77 +      9989 T
e Cercopithecus_cephus.k141_1078548                           6623 77 +     29689 T
e Cercopithecus_ascanius.k141_1024104                         3639 77 -     20310 T
e Cercocebus_torquatus.k141_3057011                           3493 77 +     27781 T
e Cercocebus_lunulatus.k141_3846941                           3263 77 +      8260 T
e Cercocebus_chrysogaster.k141_393940                         8844 77 -     19203 T
e Cercocebus_atys.KQ010504.1                               4470295 77 +   4669795 T
e Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2609 83 -      3715 T
e Cephalopachus_bancanus.k141_2037105                         4971 83 -      8605 T
e Cavia_tschudii.CavTsc_scaffold_8919                        98614 82 +    143979 T
e Cavia_porcellus.DS562891.1                              18359739 82 -  23407841 T
e Cavia_aperea.AVPZ01000300.1                             18347479 82 -  23392119 T
e Catagonus_wagneri.CatWag_scaffold_2839                     89266 124 +    217609 T
e Castor_canadensis.CasCan_scaffold_2074                    133658 80 +    179628 T
e Carollia_perspicillata.CarPer_scaffold_92756                2893 83 -     11696 T
e Carlito_syrichta.NW_007259797.1                           141055 83 -    496798 T
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18060012 83 -  44709034 T
e Capra_aegagrus.CM003241.1                               18829292 83 +  46296322 T
e Canis_lupus_orion.HG994398.1                            18496797 84 +  63665305 T
e Canis_lupus_familiaris.chr16                            17955496 84 -  59632846 T
e Canis_lupus_dingo.QKWQ01000480.1                         9031232 84 -   9314153 T
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    181845 84 -    185531 T
e CanFam4.chr16                                           17795788 84 -  60362399 T
e Camelus_ferus.KB017975.1                                  399658 83 -   1652518 T
e Camelus_dromedarius.KN272107.1                           2331382 83 -   7040546 T
e Camelus_bactrianus.KN276810.1                            9998918 83 -  17673402 T
e Bubalus_bubalis.KI419123.1                               2818467 83 +   4408762 T
e Bos_taurus.CM000203.6                                   18082978 83 +  45695690 T
e Bos_mutus.JH880303.1                                     1124900 83 -   1948126 T
e Bos_indicus.CM003047.1                                  20272340 83 +  48749331 T
e Bison_bison.KN261452.1                                    199135 83 -    288883 T
e Beatragus_hunteri.BeaHun_scaffold_50177                    26096 83 +     34529 T
e Balaenoptera_bonaerensis.DF707048.1                         2025 83 -     18090 T
e Balaenoptera_acutorostrata.KI537508.1                   15191559 83 +  23207421 T
e Avahi_peyrierasi.k141_1424874                              49933 67 +     85213 T
e Avahi_laniger.k141_765380                                  49308 67 -     92717 T
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  2475 83 +     43469 T
e Arctocebus_calabarensis.k141_288239                        14449 70 +     17124 T
e Aplodontia_rufa.AprRuf_scaffold_68852                       7278 78 +     20879 T
e Antilocapra_americana.AntAmePen_scaffold_12469             97626 83 -    100397 T
e Anoura_caudifer.AnoCau_scaffold_1412                      183123 83 +    412891 T
e Ammotragus_lervia.NIVO01071767.1                          675174 83 -   2318259 T
e Allochrocebus_solatus.k141_166128                            534 77 -     12518 T
e Allochrocebus_preussi.k141_310680                           9377 77 -      9772 T
e Allochrocebus_lhoesti.k141_4309873                          9251 77 -     28001 T
e Allenopithecus_nigroviridis.k141_3361533                    9324 77 -     52922 T
e Allactaga_bullata.AllBul_scaffold_9566                     65003 87 -     89534 T
e Ailurus_fulgens.LNAC01001112.1                             75224 84 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9507000 83 -  29979442 T
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           823290 65 -   1699592 T

a score=0.000000
s hg38.chrUn_KI270753v1                                       1216 28 +     62944 A--TGAATCACATGAAACGGAATGGTTCCA
s Gorilla_beringei.k141_3596273                              10307 29 -     32273 AA-TGAATCACATGAAACAGAATAGTTCCC
i Gorilla_beringei.k141_3596273                          C 0 I 140
s Gorilla_gorilla.CYUI03001814.1                             26502 29 -     31004 a-atgaatcacatgacacagaatggttccg
i Gorilla_gorilla.CYUI03001814.1                         T 320 I 454
s Hoolock_leuconedys.ctg274                                    429352 29 +    630532 AA-TGAATCACAGGAAACAGAATGGTTCCA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_307679                               12270 29 -     15490 AA-TGAATCACATGAAATGGAATGGTTCCA
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              54275 29 +     67168 AA-TGAATCACATGAAATGGAATGGTTCCA
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189537722 29 - 191637585 AA-TGAATCACATGAAACAGAGTGGTTCCA
i Hylobates_pileatus_b.LG02                                     C 0 I 205
s Hylobates_pileatus_a.tarseq_633                            3330820 29 -  11177569 AA-TGAATCACATGAAATGGAATGGTTCCA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    38429 29 +     80009 a-atgaatcacaggaaacagaattgttaca
i Pan_paniscus.KQ411613.1                                I 1 C 0
s Pan_troglodytes.CM009242.2                             189137461 28 + 189151597 a--tgaatcacatgaaacggagtggttccg
i Pan_troglodytes.CM009242.2                             C 0 T 278
s Pongo_abelii.CM009266.2                                189125335 30 + 189387572 AAATGAATCACATGAAACAGAGTGGTTCCG
i Pongo_abelii.CM009266.2                                T 307 I 306
s Pongo_pygmaeus.ctg66                                     9565246 29 +   9816681 AA-TGAATCACATGAAACAAAATGGTTCCA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1087968 29 -   1523678 AA-TGAATCACATGAAACGGAATGGTTCCA
i Symphalangus_syndactylus.tarseq_199                    I 1 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Loris_tardigradus.ctg83                                   999532 66 +   6120653 T
e Loris_lydekkerianus.k141_2539221                             696 65 +     11245 T
e Perodicticus_potto.k141_1092580                             3050 70 +     25941 T
e Perodicticus_ibeanus.k141_855320                            4682 70 +     13100 T
e Ziphius_cavirostris.ZipCav_flattened_line_71469            11395 83 +     12536 T
e Zapus_hudsonius.ZapHud_scaffold_11398                      10016 86 +     63895 T
e Zalophus_californianus.ZalCal_flattened_line_63728          1860 84 +      2932 T
e Xerus_inauris.XerIna_scaffold_48378                        19735 78 -     24430 T
e Vulpes_lagopus.VulLag_flattened_line_30954                  7412 84 -     43706 T
e Vicugna_pacos.KN270157.1                                 5368407 83 -   5488506 T
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Ursus_maritimus.KK499267.1                               4846935 84 -   5085361 T
e Uropsilus_gracilis.UroGra_scaffold_97021                    1934 83 -      4736 T
e Tursiops_truncatus.MRVK01000835.1                       15737703 83 +  33153633 T
e Tupaia_tana.TupTan_flattened_line_97126                     3223 81 -     10553 T
e Tupaia_chinensis.KB320699.1                              2149632 109 +   4065304 T
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                    686 71 -      1748 T
e Trachypithecus_pileatus.k141_2007326                        2953 77 +     20839 T
e Trachypithecus_phayrei.ctg124                            5933708 77 +   6242583 T
e Trachypithecus_obscurus.k141_190785                        19611 77 +     32220 T
e Trachypithecus_melamera.k141_434728                         1293 77 +      9834 T
e Trachypithecus_leucocephalus.k141_587342                    2140 77 -     10723 T
e Trachypithecus_laotum.k141_907409                           3438 77 -     21137 T
e Trachypithecus_hatinhensis.k141_143409                      9702 77 -     18194 T
e Trachypithecus_germaini.k141_912491                         9762 77 -     27529 T
e Trachypithecus_geei.k141_277701                            42290 77 -     60166 T
e Trachypithecus_francoisi.k141_1412647                       2171 77 -     19997 T
e Trachypithecus_cristatus.k141_580354                        5741 74 +     19930 T
e Trachypithecus_crepusculus.k141_1194022                     9836 77 +     15221 T
e Trachypithecus_auratus.k141_722599                          5641 74 -     20410 T
e Tonatia_saurophila.TonSau_scaffold_294                     78979 83 +    610378 T
e Tolypeutes_matacus.TolMat_scaffold_228639                   1874 68 +      8208 T
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103202 82 +    114563 T
e Theropithecus_gelada.CM009954.1                        186422913 77 + 186847797 T
e Tarsius_wallacei.k141_780063                               14975 83 +     25099 T
e Tarsius_lariang.k141_2201908                               10670 83 +     70052 T
e Tapirus_terrestris.TapTer_scaffold_755                    383676 83 +    539355 T
e Tapirus_indicus.TapInd_scaffold_9301                      115221 83 -    156842 T
e Tamandua_tetradactyla.TamTet_scaffold_1782                 69488 87 +    116680 T
e Tadarida_brasiliensis.TadBra_scaffold_25820                 6838 82 +     41958 T
e Sus_scrofa.CM000828.4                                   62882475 70 -  69701581 T
e Suricata_suricatta.SurSur_flattened_line_6629              14222 65 -    196729 T
e Spilogale_gracilis.SpiGra_flattened_line_13525             27234 83 +     97271 T
e Spermophilus_dauricus.KZ294078.1                         1948240 78 -   3870691 T
e Sorex_araneus.JH798187.1                                13647036 64 -  18376816 T
e Solenodon_paradoxus.SolPar_flattened_line_5840            187706 83 -    191337 T
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Semnopithecus_vetulus.k141_1200928                          9907 77 +     15514 T
e Semnopithecus_schistaceus.k141_1584426                      1647 77 +      7198 T
e Semnopithecus_priam.k141_638794                             1585 77 -     19483 T
e Semnopithecus_johnii.k141_670120                            2063 77 +     27826 T
e Semnopithecus_hypoleucos.k141_1615806                      21539 77 +     39453 T
e Semnopithecus_entellus.k141_11662                          14334 77 -     19888 T
e Scalopus_aquaticus.ScaAqu_scaffold_662                    151381 45 -    313613 T
e Saiga_tatarica.SaiTat_scaffold_373180                       3569 82 +      4321 T
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                84685 82 -     96226 T
e Rhinopithecus_strykeri.ctg102                            7666510 297 +   7961872 T
e Rhinopithecus_roxellana.NC_044550.1                     91230862 357 - 195417433 T
e Rhinopithecus_bieti.k119_217274                             1505 377 -     11128 T
e Rhinolophus_sinicus.LVEH01000134.1                        366934 83 -   3329780 T
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4916 82 +     55207 T
e Pygathrix_nigripes_a.k141_215492                              9792 77 -     72585 T
e Pygathrix_nigripes_b.ctg100                                 7603953 77 +   7812017 T
e Pygathrix_cinerea.k141_1153803                              9819 77 -     91421 T
e Puma_concolor.QAVW01001104.1                            20270304 65 -  38429054 T
e Pteropus_vampyrus.KN534172.1                                1636 81 -      8028 T
e Pteropus_alecto.KB030862.1                              22973699 81 +  28871421 T
e Pteronura_brasiliensis.PteBra_flattened_line_31117         36692 84 +     42204 T
e Pteronotus_parnellii.KE909381.1                            11228 88 -     21811 T
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Propithecus_verreauxi.k141_956661                            427 67 -      6182 T
e Propithecus_tattersalli.k141_790011                        24182 67 -     67325 T
e Propithecus_perrieri.k141_1200571                            370 67 -     24134 T
e Propithecus_edwardsi.k141_1176054                          22187 67 +     35766 T
e Propithecus_diadema.k141_357118                              829 67 +      4256 T
e Propithecus_coronatus.k141_347390                          24668 67 +     38485 T
e Propithecus_coquerelli.NW_012148875.1                     986379 67 +   2598838 T
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10016 82 -     22811 T
e Presbytis_mitrata.k141_2342859                              9817 77 +     10147 T
e Presbytis_comata.k141_677006                               67990 77 -     81375 T
e Platanista_gangetica.PlaMin_flattened_line_32310           34209 83 +     35617 T
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              455 83 +     22620 T
e Piliocolobus_tephrosceles.PDMG02000141.1                14290710 77 -  14605196 T
e Piliocolobus_kirkii.k141_448987                            34489 77 +     51399 T
e Piliocolobus_gordonorum.k141_381342                        33073 77 +     89929 T
e Piliocolobus_badius.k141_1234363                           38346 77 +     62158 T
e Phocoena_phocoena.PhoPho_flattened_line_24159               8503 83 +     63832 T
e Petromus_typicus.PetTyp_scaffold_42190                     25860 81 -     29689 T
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25316 22 +     32600 T
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8872 65 -     78924 T
e Papio_ursinus.k141_3428135                                  3490 77 +      9205 T
e Papio_papio.k141_802527                                     3591 59 +     27711 T
e Papio_kindae.k141_1936966                                    305 170 +     41871 T
e Papio_hamadryas.Contig39                                20558088 77 +  20919399 T
e Papio_cynocephalus.k141_4307930                             1562 170 +     20448 T
e Papio_anubis.CM001495.2                                183437404 77 + 183742232 T
e Pantholops_hodgsonii.KE114653.1                          1264381 83 -   2937107 T
e Panthera_tigris.KE722367.1                               4716993 65 -   8748460 T
e Panthera_pardus.KV860321.1                                259846 65 +  18783137 T
e Panthera_onca.PanOnc_flattened_line_3271                  147137 65 +    230217 T
e Ovis_canadensis.OviCan_scaffold_2572                      173448 83 -    191736 T
e Ovis_aries.CM001607.2                                   17585027 83 +  44047080 T
e Otocyon_megalotis.JAEUCK010005147.1                       458751 84 -    559221 T
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               6853 82 -     18566 T
e Orcinus_orca.KB316932.1                                  2781456 83 -  10937097 T
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144668 82 +    630418 T
e Odobenus_rosmarus.KB229312.1                              500738 84 -   2017862 T
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1355765 71 +   3988456 T
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744927 65 + 199412804 T
e Nycticebus_coucang.k141_5327727                             2186 65 +      8486 T
e Nycticebus_bengalensis.LG01                            102574500 65 - 196305487 T
e Nyctereutes_procyonoides.CAJHUB010000658.1               9145997 84 -   9404916 T
e Noctilio_leporinus.NocLep_scaffold_251                    756405 82 +    783361 T
e Neophocaena_asiaeorientalis.KZ687982.1                   5865541 83 +   7148211 T
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nasalis_larvatus.k141_413338                                9830 77 +     21681 T
e Nannospalax_galili.KL204047.1                            2025524 76 -   3037898 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186126 87 +    196477 T
e Myotis_myotis.MyoMyo_scaffold_28916                        32630 72 +     33610 T
e Myotis_lucifugus.GL429869.1                              3902071 72 -   4330536 T
e Myotis_davidii.KB100139.1                                1585862 72 -   6019432 T
e Myotis_brandtii.KE162005.1                                278305 72 -  10118263 T
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               297681 84 -  14710649 T
e Muscardinus_avellanarius.MusAve_scaffold_82313              2356 77 +     14296 T
e Murina_feae.MurFea_scaffold_85699                           5135 74 +     14753 T
e Mungos_mungo.MunMun_flattened_line_23663                   31353 65 +     37127 T
e Moschus_moschiferus.MosMos_scaffold_61429                  27434 81 -     27816 T
e Mormoops_blainvillei.MorMeg_scaffold_1417                 137841 83 -    366855 T
e Monodon_monoceros.MonMon_M_scaffold_103                    26585 83 -    437263 T
e Mirza_zaza.k141_952172                                      4682 69 -     37649 T
e Mirounga_angustirostris.MirAng_flattened_line_22144        62449 84 -     63350 T
e Miopithecus_ogouensis.k141_534055                           3817 77 -     28506 T
e Miniopterus_schreibersii.MinSch_scaffold_18080             32985 83 +     64694 T
e Miniopterus_natalensis.LDJU01000034.1                    1849109 83 +   8254450 T
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                13435 83 -     19307 T
e Microgale_talazaci.MicTal_scaffold_6613                    15418  9 -    145209 I
e Microcebus_murinus.CM007674.1                           18283328 70 -  93316391 T
e Mesoplodon_bidens.MesBid_scaffold_108144                    3080 83 +     10310 T
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365              6250 84 +     13704 T
e Megaderma_lyra.MegLyr_scaffold_4542                         6791 64 -    207569 T
e Marmota_marmota.CZRN01000018.1                          33097448 78 -  40650429 T
e Manis_pentadactyla.KN006162.1                              47010 81 -    317179 T
e Manis_javanica.JSZB01003497.1                              15621 81 +    737560 T
e Mandrillus_sphinx.Contig270                               346260 77 +    752769 T
e Mandrillus_leucophaeus.scaffold280                      23932082 77 -  24302211 T
e Macroglossus_sobrinus.MacSob_scaffold_8222                 87576 81 +     94391 T
e Macaca_tonkeana.k141_1498238                               20527 77 -     45290 T
e Macaca_thibetana.k99_7456                                  15730 77 -     15935 T
e Macaca_silenus.Contig273                                  324461 77 -    668171 T
e Macaca_siberu.k141_635500                                   1588 77 -     14993 T
e Macaca_radiata.k141_3680011                                 1787 77 +     20474 T
e Macaca_nigra.k141_1655396                                  74790 77 +     89720 T
e Macaca_nemestrina.KQ007038.1                            25452590 77 -  25927173 T
e Macaca_mulatta.NC_041758.1                             186834029 77 + 187317192 T
e Macaca_maura.k141_2733130                                  18941 77 +     37952 T
e Macaca_leonina.k141_3550399                                10374 77 -     29190 T
e Macaca_fuscata.k119_255327                                   921 77 -     23192 T
e Macaca_fascicularis.k141_814140                            75202 77 -    114318 T
e Macaca_cyclopis.k119_18836                                  7408 77 -     26193 T
e Macaca_assamensis.Contig5                               59670910 77 +  60120075 T
e Macaca_arctoides.k141_2326796                               1650 77 +     40492 T
e Lycaon_pictus.CM007581.1                                17951736 84 -  59628241 T
e Loxodonta_africana.GL010049.1                            4214528 82 -  43346337 T
e Lophocebus_aterrimus.ctg367                              1431466 78 +   1826925 T
e Lipotes_vexillifer.KE559953.1                             267490 80 -    662738 T
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3036119 84 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      22804 70 +     54090 T
e Lepilemur_ruficaudatus.k141_420445                         31660 70 -     32627 T
e Lepilemur_dorsalis.k141_577674                             24749 70 +     45836 T
e Lepilemur_ankaranensis.k141_596936                          6802 70 -     23766 T
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12260 85 -     42476 T
e Kogia_breviceps.KogBre_flattened_line_192630                1679 83 -      3359 T
e Jaculus_jaculus.JH725527.1                               8271383 87 -   9596543 T
e Inia_geoffrensis.IniGeo_flattened_line_48101               22412 83 +     23964 T
e Indri_indri.k141_3655594                                   18168 70 +     31101 T
e Ictidomys_tridecemlineatus.JH393364.1                    7514598 78 -   7955117 T
e Hystrix_cristata.HysCri_scaffold_5660                      80936 83 +    135385 T
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19862 83 -    143317 T
e Hyaena_hyaena.HyaHya_flattened_line_26932                  40617 65 +     55795 T
e Hipposideros_galeritus.HipGal_scaffold_29171               39830 82 +     43066 T
e Hipposideros_armiger.JXIK01000431.1                       108389 82 +   1711038 T
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112051 83 +    128679 T
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 255 82 +       961 T
e Heterocephalus_glaber.JH602082.1                        20659393 83 +  22651954 T
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17496 83 +     36099 T
e Helogale_parvula.HelPar_flattened_line_2585               238152 65 +    327341 T
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   30090 75 +     78134 T
e Glis_glis.GliGli_scaffold_19807                            30363 77 +     49224 T
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_56069               25478 83 +     26054 T
e Galagoides_demidoff.k141_31856                              3212 81 -      3432 T
e Fukomys_damarensis.KN121974.1                             848514 83 +   3816255 T
e Felis_nigripes.FelNig_flattened_line_20823                  5515 65 -     36744 T
e Felis_catus_fca126.CM031415.1                           20191990 65 + 205367284 T
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             24808 83 -     44125 T
e Eschrichtius_robustus.EscRob_flattened_line_8968           10871 83 +    133382 T
e Erythrocebus_patas.Contig38                             21199940 77 -  21539334 T
e Erinaceus_europaeus.JH835339.1                           3325355 79 -   7059049 T
e Equus_przewalskii.KK951119.1                               29602 83 +    498745 T
e Equus_caballus.CM000403.2                               18527587 83 -  39960074 T
e Equus_asinus.JREZ01000139.1                              1279766 83 +   4378816 T
e Eptesicus_fuscus.JH977646.1                              2144081 83 -  14770903 T
e Enhydra_lutris.KZ291758.1                               16325783 81 -  41312741 T
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089018 82 +  10337057 T
e Elaphurus_davidianus.JRFZ01104969.1                       310296 83 +    607251 T
e Eidolon_helvum.KE759718.1                                   7430 82 +     11740 T
e Dolichotis_patagonum.DolPat_scaffold_30833                 31504 83 -     42551 T
e Dipodomys_stephensi.DipSte_scaffold_75855                  12030 83 +     14536 T
e Dipodomys_ordii.KN672350.1                              18895820 83 +  37912305 T
e Dinomys_branickii.DinBra_scaffold_21862                    34287 77 +     67921 T
e Diceros_bicornis.DicBicMic_scaffold_5955                    2499 83 +    198055 T
e Dicerorhinus_sumatrensis.PEKH010002091.1                  669424 83 +   1390856 T
e Desmodus_rotundus.KZ672289.1                             8627924 83 +  20541912 T
e Delphinapterus_leucas.KZ290073.1                        16811195 83 +  35494412 T
e Daubentonia_madagascariensis.ctg71                      12532896 70 -  12879189 T
e Dasypus_novemcinctus.JH564415.1                            61086 85 +   2246927 T
e Dasyprocta_punctata.DasPun_flattened_line_206793            1247 83 +      3576 T
e Cuniculus_paca.CunPac_flattened_line_231100                 2864 83 +      5455 T
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             24235 65 -     87169 T
e Crocidura_indochinensis.CroInd_scaffold_287352               379 52 +      4208 T
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          10509 80 -     20389 T
e Condylura_cristata.JH655891.1                           17545999 82 -  53390261 T
e Colobus_polykomos.k141_906115                              31777 104 +     84244 T
e Colobus_guereza.LG01                                   199944908 129 + 200372422 T
e Colobus_angolensis.KN981557.1                            1905238 77 +   2368649 T
e Choloepus_hoffmanni.KN194906.1                            170274 87 +    839153 T
e Choloepus_didactylus.ChoDid_scaffold_45914                 15175 87 +     19366 T
e Chlorocebus_sabaeus.CM001947.1                         135416709 77 + 135778131 T
e Chlorocebus_pygerythrus.k141_1025673                        9704 77 -     50209 T
e Chlorocebus_aethiops.ctg25                              18423261 77 -  18827391 T
e Chinchilla_lanigera.JH722012.1                           1248509 80 +   2543920 T
e Cheirogaleus_medius.k141_1055463                           12075 66 +     57038 T
e Cheirogaleus_major.k141_333249                             16726 66 -     52598 T
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            4816 68 -      6351 T
e Cercopithecus_roloway.k141_3180641                         39792 77 -     41420 T
e Cercopithecus_pogonias.k141_822820                          9298 77 +     17596 T
e Cercopithecus_petaurista.k141_807961                        9322 77 -     27947 T
e Cercopithecus_nictitans.k141_3278028                        1809 77 +      7159 T
e Cercopithecus_neglectus.k141_2526306                       34517 77 -     53127 T
e Cercopithecus_mona.ctg39                                21217397 77 -  21565898 T
e Cercopithecus_albogularis.ctg5                                38811706 77 +  39242232 T
e Cercopithecus_lowei.k141_457449                             9330 77 -     11289 T
e Cercopithecus_hamlyni.k141_187466                           9311 77 -     27936 T
e Cercopithecus_diana.k141_2427854                             976 77 +      9989 T
e Cercopithecus_cephus.k141_1078548                           6623 77 +     29689 T
e Cercopithecus_ascanius.k141_1024104                         3639 77 -     20310 T
e Cercocebus_torquatus.k141_3057011                           3493 77 +     27781 T
e Cercocebus_lunulatus.k141_3846941                           3263 77 +      8260 T
e Cercocebus_chrysogaster.k141_393940                         8844 77 -     19203 T
e Cercocebus_atys.KQ010504.1                               4470295 77 +   4669795 T
e Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2609 83 -      3715 T
e Cephalopachus_bancanus.k141_2037105                         4971 83 -      8605 T
e Cavia_tschudii.CavTsc_scaffold_8919                        98614 82 +    143979 T
e Cavia_porcellus.DS562891.1                              18359739 82 -  23407841 T
e Cavia_aperea.AVPZ01000300.1                             18347479 82 -  23392119 T
e Catagonus_wagneri.CatWag_scaffold_2839                     89266 124 +    217609 T
e Castor_canadensis.CasCan_scaffold_2074                    133658 80 +    179628 T
e Carollia_perspicillata.CarPer_scaffold_92756                2893 83 -     11696 T
e Carlito_syrichta.NW_007259797.1                           141055 83 -    496798 T
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18060012 83 -  44709034 T
e Capra_aegagrus.CM003241.1                               18829292 83 +  46296322 T
e Canis_lupus_orion.HG994398.1                            18496797 84 +  63665305 T
e Canis_lupus_familiaris.chr16                            17955496 84 -  59632846 T
e Canis_lupus_dingo.QKWQ01000480.1                         9031232 84 -   9314153 T
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    181845 84 -    185531 T
e CanFam4.chr16                                           17795788 84 -  60362399 T
e Camelus_ferus.KB017975.1                                  399658 83 -   1652518 T
e Camelus_dromedarius.KN272107.1                           2331382 83 -   7040546 T
e Camelus_bactrianus.KN276810.1                            9998918 83 -  17673402 T
e Bubalus_bubalis.KI419123.1                               2818467 83 +   4408762 T
e Bos_taurus.CM000203.6                                   18082978 83 +  45695690 T
e Bos_mutus.JH880303.1                                     1124900 83 -   1948126 T
e Bos_indicus.CM003047.1                                  20272340 83 +  48749331 T
e Bison_bison.KN261452.1                                    199135 83 -    288883 T
e Beatragus_hunteri.BeaHun_scaffold_50177                    26096 83 +     34529 T
e Balaenoptera_bonaerensis.DF707048.1                         2025 83 -     18090 T
e Balaenoptera_acutorostrata.KI537508.1                   15191559 83 +  23207421 T
e Avahi_peyrierasi.k141_1424874                              49933 67 +     85213 T
e Avahi_laniger.k141_765380                                  49308 67 -     92717 T
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  2475 83 +     43469 T
e Arctocebus_calabarensis.k141_288239                        14449 70 +     17124 T
e Aplodontia_rufa.AprRuf_scaffold_68852                       7278 78 +     20879 T
e Antilocapra_americana.AntAmePen_scaffold_12469             97626 83 -    100397 T
e Anoura_caudifer.AnoCau_scaffold_1412                      183123 83 +    412891 T
e Ammotragus_lervia.NIVO01071767.1                          675174 83 -   2318259 T
e Allochrocebus_solatus.k141_166128                            534 77 -     12518 T
e Allochrocebus_preussi.k141_310680                           9377 77 -      9772 T
e Allochrocebus_lhoesti.k141_4309873                          9251 77 -     28001 T
e Allenopithecus_nigroviridis.k141_3361533                    9324 77 -     52922 T
e Allactaga_bullata.AllBul_scaffold_9566                     65003 87 -     89534 T
e Ailurus_fulgens.LNAC01001112.1                             75224 84 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9507000 83 -  29979442 T
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           823290 65 -   1699592 T

a score=0.000000
s hg38.chrUn_KI270753v1                                       1244 16 +     62944 TTGTCAC------TGAGTAGAA
s Gorilla_beringei.k141_3596273                              10476 16 -     32273 TTGTCAC------TGAGTAGAA
i Gorilla_beringei.k141_3596273                          I 140 C 0
s Gorilla_gorilla.CYUI03001814.1                             26985 22 -     31004 ttgtcactgGAGTTGAGTAgaa
i Gorilla_gorilla.CYUI03001814.1                         I 454 T 455
s Hoolock_leuconedys.ctg274                                    429381 16 +    630532 TTGTCAC------CGAGTAGAA
i Hoolock_leuconedys.ctg274                                 C 0 T 206
s Hylobates_agilis.k141_307679                               12299 16 -     15490 TTGTCAC------CTAGTAGAA
i Hylobates_agilis.k141_307679                           C 0 T 206
s Hylobates_klossii.k141_282416                              54304 16 +     67168 TTGTCAC------CTAGTAGAA
i Hylobates_klossii.k141_282416                          C 0 T 206
s Hylobates_pileatus_b.LG02                                     189537956 16 - 191637585 TTGTCAC------CTAGTAGAA
i Hylobates_pileatus_b.LG02                                     I 205 T 205
s Hylobates_pileatus_a.tarseq_633                            3330849 16 -  11177569 TTGTCAC------CTAGTAGAA
i Hylobates_pileatus_a.tarseq_633                          C 0 T 206
s Pan_paniscus.KQ411613.1                                    38458 16 +     80009 ttgtcac------tgagtagaa
i Pan_paniscus.KQ411613.1                                C 0 T 2338
s Pan_troglodytes.CM009242.2                             189137211 16 + 189151597 ttgtcac------cgagtagaa
i Pan_troglodytes.CM009242.2                             T 278 T 139
s Pongo_abelii.CM009266.2                                189125671 16 + 189387572 TTGTCAC------CAAGTAGAA
i Pongo_abelii.CM009266.2                                I 306 T 513
s Pongo_pygmaeus.ctg66                                     9565275 16 +   9816681 TTGTCAC------CAAGTAGAA
i Pongo_pygmaeus.ctg66                                   C 0 T 274
s Symphalangus_syndactylus.tarseq_199                      1087997 16 -   1523678 TTGTCAC------CGAGTAGAA
i Symphalangus_syndactylus.tarseq_199                    C 0 T 207
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Loris_tardigradus.ctg83                                   999532 66 +   6120653 T
e Loris_lydekkerianus.k141_2539221                             696 65 +     11245 T
e Perodicticus_potto.k141_1092580                             3050 70 +     25941 T
e Perodicticus_ibeanus.k141_855320                            4682 70 +     13100 T
e Ziphius_cavirostris.ZipCav_flattened_line_71469            11395 83 +     12536 T
e Zapus_hudsonius.ZapHud_scaffold_11398                      10016 86 +     63895 T
e Zalophus_californianus.ZalCal_flattened_line_63728          1860 84 +      2932 T
e Xerus_inauris.XerIna_scaffold_48378                        19735 78 -     24430 T
e Vulpes_lagopus.VulLag_flattened_line_30954                  7412 84 -     43706 T
e Vicugna_pacos.KN270157.1                                 5368407 83 -   5488506 T
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Ursus_maritimus.KK499267.1                               4846935 84 -   5085361 T
e Uropsilus_gracilis.UroGra_scaffold_97021                    1934 83 -      4736 T
e Tursiops_truncatus.MRVK01000835.1                       15737703 83 +  33153633 T
e Tupaia_tana.TupTan_flattened_line_97126                     3223 81 -     10553 T
e Tupaia_chinensis.KB320699.1                              2149632 109 +   4065304 T
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                    686 71 -      1748 T
e Trachypithecus_pileatus.k141_2007326                        2953 77 +     20839 T
e Trachypithecus_phayrei.ctg124                            5933708 77 +   6242583 T
e Trachypithecus_obscurus.k141_190785                        19611 77 +     32220 T
e Trachypithecus_melamera.k141_434728                         1293 77 +      9834 T
e Trachypithecus_leucocephalus.k141_587342                    2140 77 -     10723 T
e Trachypithecus_laotum.k141_907409                           3438 77 -     21137 T
e Trachypithecus_hatinhensis.k141_143409                      9702 77 -     18194 T
e Trachypithecus_germaini.k141_912491                         9762 77 -     27529 T
e Trachypithecus_geei.k141_277701                            42290 77 -     60166 T
e Trachypithecus_francoisi.k141_1412647                       2171 77 -     19997 T
e Trachypithecus_cristatus.k141_580354                        5741 74 +     19930 T
e Trachypithecus_crepusculus.k141_1194022                     9836 77 +     15221 T
e Trachypithecus_auratus.k141_722599                          5641 74 -     20410 T
e Tonatia_saurophila.TonSau_scaffold_294                     78979 83 +    610378 T
e Tolypeutes_matacus.TolMat_scaffold_228639                   1874 68 +      8208 T
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103202 82 +    114563 T
e Theropithecus_gelada.CM009954.1                        186422913 77 + 186847797 T
e Tarsius_wallacei.k141_780063                               14975 83 +     25099 T
e Tarsius_lariang.k141_2201908                               10670 83 +     70052 T
e Tapirus_terrestris.TapTer_scaffold_755                    383676 83 +    539355 T
e Tapirus_indicus.TapInd_scaffold_9301                      115221 83 -    156842 T
e Tamandua_tetradactyla.TamTet_scaffold_1782                 69488 87 +    116680 T
e Tadarida_brasiliensis.TadBra_scaffold_25820                 6838 82 +     41958 T
e Sus_scrofa.CM000828.4                                   62882475 70 -  69701581 T
e Suricata_suricatta.SurSur_flattened_line_6629              14222 65 -    196729 T
e Spilogale_gracilis.SpiGra_flattened_line_13525             27234 83 +     97271 T
e Spermophilus_dauricus.KZ294078.1                         1948240 78 -   3870691 T
e Sorex_araneus.JH798187.1                                13647036 64 -  18376816 T
e Solenodon_paradoxus.SolPar_flattened_line_5840            187706 83 -    191337 T
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Semnopithecus_vetulus.k141_1200928                          9907 77 +     15514 T
e Semnopithecus_schistaceus.k141_1584426                      1647 77 +      7198 T
e Semnopithecus_priam.k141_638794                             1585 77 -     19483 T
e Semnopithecus_johnii.k141_670120                            2063 77 +     27826 T
e Semnopithecus_hypoleucos.k141_1615806                      21539 77 +     39453 T
e Semnopithecus_entellus.k141_11662                          14334 77 -     19888 T
e Scalopus_aquaticus.ScaAqu_scaffold_662                    151381 45 -    313613 T
e Saiga_tatarica.SaiTat_scaffold_373180                       3569 82 +      4321 T
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                84685 82 -     96226 T
e Rhinopithecus_strykeri.ctg102                            7666510 297 +   7961872 T
e Rhinopithecus_roxellana.NC_044550.1                     91230862 357 - 195417433 T
e Rhinopithecus_bieti.k119_217274                             1505 377 -     11128 T
e Rhinolophus_sinicus.LVEH01000134.1                        366934 83 -   3329780 T
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4916 82 +     55207 T
e Pygathrix_nigripes_a.k141_215492                              9792 77 -     72585 T
e Pygathrix_nigripes_b.ctg100                                 7603953 77 +   7812017 T
e Pygathrix_cinerea.k141_1153803                              9819 77 -     91421 T
e Puma_concolor.QAVW01001104.1                            20270304 65 -  38429054 T
e Pteropus_vampyrus.KN534172.1                                1636 81 -      8028 T
e Pteropus_alecto.KB030862.1                              22973699 81 +  28871421 T
e Pteronura_brasiliensis.PteBra_flattened_line_31117         36692 84 +     42204 T
e Pteronotus_parnellii.KE909381.1                            11228 88 -     21811 T
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Propithecus_verreauxi.k141_956661                            427 67 -      6182 T
e Propithecus_tattersalli.k141_790011                        24182 67 -     67325 T
e Propithecus_perrieri.k141_1200571                            370 67 -     24134 T
e Propithecus_edwardsi.k141_1176054                          22187 67 +     35766 T
e Propithecus_diadema.k141_357118                              829 67 +      4256 T
e Propithecus_coronatus.k141_347390                          24668 67 +     38485 T
e Propithecus_coquerelli.NW_012148875.1                     986379 67 +   2598838 T
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10016 82 -     22811 T
e Presbytis_mitrata.k141_2342859                              9817 77 +     10147 T
e Presbytis_comata.k141_677006                               67990 77 -     81375 T
e Platanista_gangetica.PlaMin_flattened_line_32310           34209 83 +     35617 T
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              455 83 +     22620 T
e Piliocolobus_tephrosceles.PDMG02000141.1                14290710 77 -  14605196 T
e Piliocolobus_kirkii.k141_448987                            34489 77 +     51399 T
e Piliocolobus_gordonorum.k141_381342                        33073 77 +     89929 T
e Piliocolobus_badius.k141_1234363                           38346 77 +     62158 T
e Phocoena_phocoena.PhoPho_flattened_line_24159               8503 83 +     63832 T
e Petromus_typicus.PetTyp_scaffold_42190                     25860 81 -     29689 T
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25316 22 +     32600 T
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8872 65 -     78924 T
e Papio_ursinus.k141_3428135                                  3490 77 +      9205 T
e Papio_papio.k141_802527                                     3591 59 +     27711 T
e Papio_kindae.k141_1936966                                    305 170 +     41871 T
e Papio_hamadryas.Contig39                                20558088 77 +  20919399 T
e Papio_cynocephalus.k141_4307930                             1562 170 +     20448 T
e Papio_anubis.CM001495.2                                183437404 77 + 183742232 T
e Pantholops_hodgsonii.KE114653.1                          1264381 83 -   2937107 T
e Panthera_tigris.KE722367.1                               4716993 65 -   8748460 T
e Panthera_pardus.KV860321.1                                259846 65 +  18783137 T
e Panthera_onca.PanOnc_flattened_line_3271                  147137 65 +    230217 T
e Ovis_canadensis.OviCan_scaffold_2572                      173448 83 -    191736 T
e Ovis_aries.CM001607.2                                   17585027 83 +  44047080 T
e Otocyon_megalotis.JAEUCK010005147.1                       458751 84 -    559221 T
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               6853 82 -     18566 T
e Orcinus_orca.KB316932.1                                  2781456 83 -  10937097 T
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144668 82 +    630418 T
e Odobenus_rosmarus.KB229312.1                              500738 84 -   2017862 T
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1355765 71 +   3988456 T
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744927 65 + 199412804 T
e Nycticebus_coucang.k141_5327727                             2186 65 +      8486 T
e Nycticebus_bengalensis.LG01                            102574500 65 - 196305487 T
e Nyctereutes_procyonoides.CAJHUB010000658.1               9145997 84 -   9404916 T
e Noctilio_leporinus.NocLep_scaffold_251                    756405 82 +    783361 T
e Neophocaena_asiaeorientalis.KZ687982.1                   5865541 83 +   7148211 T
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nasalis_larvatus.k141_413338                                9830 77 +     21681 T
e Nannospalax_galili.KL204047.1                            2025524 76 -   3037898 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186126 87 +    196477 T
e Myotis_myotis.MyoMyo_scaffold_28916                        32630 72 +     33610 T
e Myotis_lucifugus.GL429869.1                              3902071 72 -   4330536 T
e Myotis_davidii.KB100139.1                                1585862 72 -   6019432 T
e Myotis_brandtii.KE162005.1                                278305 72 -  10118263 T
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               297681 84 -  14710649 T
e Muscardinus_avellanarius.MusAve_scaffold_82313              2356 77 +     14296 T
e Murina_feae.MurFea_scaffold_85699                           5135 74 +     14753 T
e Mungos_mungo.MunMun_flattened_line_23663                   31353 65 +     37127 T
e Moschus_moschiferus.MosMos_scaffold_61429                  27434 81 -     27816 T
e Mormoops_blainvillei.MorMeg_scaffold_1417                 137841 83 -    366855 T
e Monodon_monoceros.MonMon_M_scaffold_103                    26585 83 -    437263 T
e Mirza_zaza.k141_952172                                      4682 69 -     37649 T
e Mirounga_angustirostris.MirAng_flattened_line_22144        62449 84 -     63350 T
e Miopithecus_ogouensis.k141_534055                           3817 77 -     28506 T
e Miniopterus_schreibersii.MinSch_scaffold_18080             32985 83 +     64694 T
e Miniopterus_natalensis.LDJU01000034.1                    1849109 83 +   8254450 T
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                13435 83 -     19307 T
e Microgale_talazaci.MicTal_scaffold_6613                    15418  9 -    145209 I
e Microcebus_murinus.CM007674.1                           18283328 70 -  93316391 T
e Mesoplodon_bidens.MesBid_scaffold_108144                    3080 83 +     10310 T
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365              6250 84 +     13704 T
e Megaderma_lyra.MegLyr_scaffold_4542                         6791 64 -    207569 T
e Marmota_marmota.CZRN01000018.1                          33097448 78 -  40650429 T
e Manis_pentadactyla.KN006162.1                              47010 81 -    317179 T
e Manis_javanica.JSZB01003497.1                              15621 81 +    737560 T
e Mandrillus_sphinx.Contig270                               346260 77 +    752769 T
e Mandrillus_leucophaeus.scaffold280                      23932082 77 -  24302211 T
e Macroglossus_sobrinus.MacSob_scaffold_8222                 87576 81 +     94391 T
e Macaca_tonkeana.k141_1498238                               20527 77 -     45290 T
e Macaca_thibetana.k99_7456                                  15730 77 -     15935 T
e Macaca_silenus.Contig273                                  324461 77 -    668171 T
e Macaca_siberu.k141_635500                                   1588 77 -     14993 T
e Macaca_radiata.k141_3680011                                 1787 77 +     20474 T
e Macaca_nigra.k141_1655396                                  74790 77 +     89720 T
e Macaca_nemestrina.KQ007038.1                            25452590 77 -  25927173 T
e Macaca_mulatta.NC_041758.1                             186834029 77 + 187317192 T
e Macaca_maura.k141_2733130                                  18941 77 +     37952 T
e Macaca_leonina.k141_3550399                                10374 77 -     29190 T
e Macaca_fuscata.k119_255327                                   921 77 -     23192 T
e Macaca_fascicularis.k141_814140                            75202 77 -    114318 T
e Macaca_cyclopis.k119_18836                                  7408 77 -     26193 T
e Macaca_assamensis.Contig5                               59670910 77 +  60120075 T
e Macaca_arctoides.k141_2326796                               1650 77 +     40492 T
e Lycaon_pictus.CM007581.1                                17951736 84 -  59628241 T
e Loxodonta_africana.GL010049.1                            4214528 82 -  43346337 T
e Lophocebus_aterrimus.ctg367                              1431466 78 +   1826925 T
e Lipotes_vexillifer.KE559953.1                             267490 80 -    662738 T
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3036119 84 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      22804 70 +     54090 T
e Lepilemur_ruficaudatus.k141_420445                         31660 70 -     32627 T
e Lepilemur_dorsalis.k141_577674                             24749 70 +     45836 T
e Lepilemur_ankaranensis.k141_596936                          6802 70 -     23766 T
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12260 85 -     42476 T
e Kogia_breviceps.KogBre_flattened_line_192630                1679 83 -      3359 T
e Jaculus_jaculus.JH725527.1                               8271383 87 -   9596543 T
e Inia_geoffrensis.IniGeo_flattened_line_48101               22412 83 +     23964 T
e Indri_indri.k141_3655594                                   18168 70 +     31101 T
e Ictidomys_tridecemlineatus.JH393364.1                    7514598 78 -   7955117 T
e Hystrix_cristata.HysCri_scaffold_5660                      80936 83 +    135385 T
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19862 83 -    143317 T
e Hyaena_hyaena.HyaHya_flattened_line_26932                  40617 65 +     55795 T
e Hipposideros_galeritus.HipGal_scaffold_29171               39830 82 +     43066 T
e Hipposideros_armiger.JXIK01000431.1                       108389 82 +   1711038 T
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112051 83 +    128679 T
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 255 82 +       961 T
e Heterocephalus_glaber.JH602082.1                        20659393 83 +  22651954 T
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17496 83 +     36099 T
e Helogale_parvula.HelPar_flattened_line_2585               238152 65 +    327341 T
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   30090 75 +     78134 T
e Glis_glis.GliGli_scaffold_19807                            30363 77 +     49224 T
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_56069               25478 83 +     26054 T
e Galagoides_demidoff.k141_31856                              3212 81 -      3432 T
e Fukomys_damarensis.KN121974.1                             848514 83 +   3816255 T
e Felis_nigripes.FelNig_flattened_line_20823                  5515 65 -     36744 T
e Felis_catus_fca126.CM031415.1                           20191990 65 + 205367284 T
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             24808 83 -     44125 T
e Eschrichtius_robustus.EscRob_flattened_line_8968           10871 83 +    133382 T
e Erythrocebus_patas.Contig38                             21199940 77 -  21539334 T
e Erinaceus_europaeus.JH835339.1                           3325355 79 -   7059049 T
e Equus_przewalskii.KK951119.1                               29602 83 +    498745 T
e Equus_caballus.CM000403.2                               18527587 83 -  39960074 T
e Equus_asinus.JREZ01000139.1                              1279766 83 +   4378816 T
e Eptesicus_fuscus.JH977646.1                              2144081 83 -  14770903 T
e Enhydra_lutris.KZ291758.1                               16325783 81 -  41312741 T
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089018 82 +  10337057 T
e Elaphurus_davidianus.JRFZ01104969.1                       310296 83 +    607251 T
e Eidolon_helvum.KE759718.1                                   7430 82 +     11740 T
e Dolichotis_patagonum.DolPat_scaffold_30833                 31504 83 -     42551 T
e Dipodomys_stephensi.DipSte_scaffold_75855                  12030 83 +     14536 T
e Dipodomys_ordii.KN672350.1                              18895820 83 +  37912305 T
e Dinomys_branickii.DinBra_scaffold_21862                    34287 77 +     67921 T
e Diceros_bicornis.DicBicMic_scaffold_5955                    2499 83 +    198055 T
e Dicerorhinus_sumatrensis.PEKH010002091.1                  669424 83 +   1390856 T
e Desmodus_rotundus.KZ672289.1                             8627924 83 +  20541912 T
e Delphinapterus_leucas.KZ290073.1                        16811195 83 +  35494412 T
e Daubentonia_madagascariensis.ctg71                      12532896 70 -  12879189 T
e Dasypus_novemcinctus.JH564415.1                            61086 85 +   2246927 T
e Dasyprocta_punctata.DasPun_flattened_line_206793            1247 83 +      3576 T
e Cuniculus_paca.CunPac_flattened_line_231100                 2864 83 +      5455 T
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             24235 65 -     87169 T
e Crocidura_indochinensis.CroInd_scaffold_287352               379 52 +      4208 T
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          10509 80 -     20389 T
e Condylura_cristata.JH655891.1                           17545999 82 -  53390261 T
e Colobus_polykomos.k141_906115                              31777 104 +     84244 T
e Colobus_guereza.LG01                                   199944908 129 + 200372422 T
e Colobus_angolensis.KN981557.1                            1905238 77 +   2368649 T
e Choloepus_hoffmanni.KN194906.1                            170274 87 +    839153 T
e Choloepus_didactylus.ChoDid_scaffold_45914                 15175 87 +     19366 T
e Chlorocebus_sabaeus.CM001947.1                         135416709 77 + 135778131 T
e Chlorocebus_pygerythrus.k141_1025673                        9704 77 -     50209 T
e Chlorocebus_aethiops.ctg25                              18423261 77 -  18827391 T
e Chinchilla_lanigera.JH722012.1                           1248509 80 +   2543920 T
e Cheirogaleus_medius.k141_1055463                           12075 66 +     57038 T
e Cheirogaleus_major.k141_333249                             16726 66 -     52598 T
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            4816 68 -      6351 T
e Cercopithecus_roloway.k141_3180641                         39792 77 -     41420 T
e Cercopithecus_pogonias.k141_822820                          9298 77 +     17596 T
e Cercopithecus_petaurista.k141_807961                        9322 77 -     27947 T
e Cercopithecus_nictitans.k141_3278028                        1809 77 +      7159 T
e Cercopithecus_neglectus.k141_2526306                       34517 77 -     53127 T
e Cercopithecus_mona.ctg39                                21217397 77 -  21565898 T
e Cercopithecus_albogularis.ctg5                                38811706 77 +  39242232 T
e Cercopithecus_lowei.k141_457449                             9330 77 -     11289 T
e Cercopithecus_hamlyni.k141_187466                           9311 77 -     27936 T
e Cercopithecus_diana.k141_2427854                             976 77 +      9989 T
e Cercopithecus_cephus.k141_1078548                           6623 77 +     29689 T
e Cercopithecus_ascanius.k141_1024104                         3639 77 -     20310 T
e Cercocebus_torquatus.k141_3057011                           3493 77 +     27781 T
e Cercocebus_lunulatus.k141_3846941                           3263 77 +      8260 T
e Cercocebus_chrysogaster.k141_393940                         8844 77 -     19203 T
e Cercocebus_atys.KQ010504.1                               4470295 77 +   4669795 T
e Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2609 83 -      3715 T
e Cephalopachus_bancanus.k141_2037105                         4971 83 -      8605 T
e Cavia_tschudii.CavTsc_scaffold_8919                        98614 82 +    143979 T
e Cavia_porcellus.DS562891.1                              18359739 82 -  23407841 T
e Cavia_aperea.AVPZ01000300.1                             18347479 82 -  23392119 T
e Catagonus_wagneri.CatWag_scaffold_2839                     89266 124 +    217609 T
e Castor_canadensis.CasCan_scaffold_2074                    133658 80 +    179628 T
e Carollia_perspicillata.CarPer_scaffold_92756                2893 83 -     11696 T
e Carlito_syrichta.NW_007259797.1                           141055 83 -    496798 T
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18060012 83 -  44709034 T
e Capra_aegagrus.CM003241.1                               18829292 83 +  46296322 T
e Canis_lupus_orion.HG994398.1                            18496797 84 +  63665305 T
e Canis_lupus_familiaris.chr16                            17955496 84 -  59632846 T
e Canis_lupus_dingo.QKWQ01000480.1                         9031232 84 -   9314153 T
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    181845 84 -    185531 T
e CanFam4.chr16                                           17795788 84 -  60362399 T
e Camelus_ferus.KB017975.1                                  399658 83 -   1652518 T
e Camelus_dromedarius.KN272107.1                           2331382 83 -   7040546 T
e Camelus_bactrianus.KN276810.1                            9998918 83 -  17673402 T
e Bubalus_bubalis.KI419123.1                               2818467 83 +   4408762 T
e Bos_taurus.CM000203.6                                   18082978 83 +  45695690 T
e Bos_mutus.JH880303.1                                     1124900 83 -   1948126 T
e Bos_indicus.CM003047.1                                  20272340 83 +  48749331 T
e Bison_bison.KN261452.1                                    199135 83 -    288883 T
e Beatragus_hunteri.BeaHun_scaffold_50177                    26096 83 +     34529 T
e Balaenoptera_bonaerensis.DF707048.1                         2025 83 -     18090 T
e Balaenoptera_acutorostrata.KI537508.1                   15191559 83 +  23207421 T
e Avahi_peyrierasi.k141_1424874                              49933 67 +     85213 T
e Avahi_laniger.k141_765380                                  49308 67 -     92717 T
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  2475 83 +     43469 T
e Arctocebus_calabarensis.k141_288239                        14449 70 +     17124 T
e Aplodontia_rufa.AprRuf_scaffold_68852                       7278 78 +     20879 T
e Antilocapra_americana.AntAmePen_scaffold_12469             97626 83 -    100397 T
e Anoura_caudifer.AnoCau_scaffold_1412                      183123 83 +    412891 T
e Ammotragus_lervia.NIVO01071767.1                          675174 83 -   2318259 T
e Allochrocebus_solatus.k141_166128                            534 77 -     12518 T
e Allochrocebus_preussi.k141_310680                           9377 77 -      9772 T
e Allochrocebus_lhoesti.k141_4309873                          9251 77 -     28001 T
e Allenopithecus_nigroviridis.k141_3361533                    9324 77 -     52922 T
e Allactaga_bullata.AllBul_scaffold_9566                     65003 87 -     89534 T
e Ailurus_fulgens.LNAC01001112.1                             75224 84 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9507000 83 -  29979442 T
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           823290 65 -   1699592 T

a score=0.000000
s hg38.chrUn_KI270753v1                                       1260 2 +     62944 CG
s Acinonyx_jubatus.LLWD01001279.1                           823225 2 -   1699592 CC
i Acinonyx_jubatus.LLWD01001279.1                        T 65 I 1
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506917 2 -  29979442 CC
i Ailuropoda_melanoleuca.LNAT01000098.1                  T 83 I 1
s Ailurus_fulgens.LNAC01001112.1                             75140 2 -    347723 CC
i Ailurus_fulgens.LNAC01001112.1                         T 84 I 1
s Allactaga_bullata.AllBul_scaffold_9566                     64916 2 -     89534 CA
i Allactaga_bullata.AllBul_scaffold_9566                 T 87 I 5
s Allenopithecus_nigroviridis.k141_3361533                    9247 2 -     52922 CC
i Allenopithecus_nigroviridis.k141_3361533               T 77 C 0
s Allochrocebus_lhoesti.k141_4309873                          9174 2 -     28001 CC
i Allochrocebus_lhoesti.k141_4309873                     T 77 C 0
s Allochrocebus_preussi.k141_310680                           9300 2 -      9772 CC
i Allochrocebus_preussi.k141_310680                      T 77 C 0
s Allochrocebus_solatus.k141_166128                            457 2 -     12518 CC
i Allochrocebus_solatus.k141_166128                      T 77 C 0
s Ammotragus_lervia.NIVO01071767.1                          675091 2 -   2318259 CA
i Ammotragus_lervia.NIVO01071767.1                       T 83 I 1
s Anoura_caudifer.AnoCau_scaffold_1412                      183040 2 +    412891 CC
i Anoura_caudifer.AnoCau_scaffold_1412                   T 83 I 1
s Antilocapra_americana.AntAmePen_scaffold_12469             97543 2 -    100397 CC
i Antilocapra_americana.AntAmePen_scaffold_12469         T 83 I 1
s Aplodontia_rufa.AprRuf_scaffold_68852                       7200 2 +     20879 CC
i Aplodontia_rufa.AprRuf_scaffold_68852                  T 78 I 1
s Arctocebus_calabarensis.k141_288239                        14379 2 +     17124 CA
i Arctocebus_calabarensis.k141_288239                    T 70 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2392 2 +     43469 CC
i Artibeus_jamaicensis.ArtJam_scaffold_25439             T 83 I 1
s Avahi_laniger.k141_765380                                  49241 2 -     92717 CT
i Avahi_laniger.k141_765380                              T 67 C 0
s Avahi_peyrierasi.k141_1424874                              49866 2 +     85213 CT
i Avahi_peyrierasi.k141_1424874                          T 67 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191476 2 +  23207421 CC
i Balaenoptera_acutorostrata.KI537508.1                  T 83 I 1
s Balaenoptera_bonaerensis.DF707048.1                         1942 2 -     18090 CC
i Balaenoptera_bonaerensis.DF707048.1                    T 83 I 1
s Beatragus_hunteri.BeaHun_scaffold_50177                    26013 2 +     34529 CA
i Beatragus_hunteri.BeaHun_scaffold_50177                T 83 I 1
s Bison_bison.KN261452.1                                    199052 2 -    288883 CA
i Bison_bison.KN261452.1                                 T 83 I 1
s Bos_indicus.CM003047.1                                  20272257 2 +  48749331 CA
i Bos_indicus.CM003047.1                                 T 83 I 1
s Bos_mutus.JH880303.1                                     1124817 2 -   1948126 CA
i Bos_mutus.JH880303.1                                   T 83 I 1
s Bos_taurus.CM000203.6                                   18082895 2 +  45695690 CA
i Bos_taurus.CM000203.6                                  T 83 I 1
s Bubalus_bubalis.KI419123.1                               2818384 2 +   4408762 CA
i Bubalus_bubalis.KI419123.1                             T 83 I 1
s Camelus_bactrianus.KN276810.1                            9998835 2 -  17673402 CC
i Camelus_bactrianus.KN276810.1                          T 83 I 1
s Camelus_dromedarius.KN272107.1                           2331299 2 -   7040546 CC
i Camelus_dromedarius.KN272107.1                         T 83 I 1
s Camelus_ferus.KB017975.1                                  399575 2 -   1652518 CC
i Camelus_ferus.KB017975.1                               T 83 I 1
s CanFam4.chr16                                           17795704 2 -  60362399 CC
i CanFam4.chr16                                          T 84 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181761 2 -    185531 CC
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 T 84 I 1
s Canis_lupus_dingo.QKWQ01000480.1                         9031148 2 -   9314153 CC
i Canis_lupus_dingo.QKWQ01000480.1                       T 84 I 1
s Canis_lupus_familiaris.chr16                            17955412 2 -  59632846 CC
i Canis_lupus_familiaris.chr16                           T 84 I 1
s Canis_lupus_orion.HG994398.1                            18496713 2 +  63665305 CC
i Canis_lupus_orion.HG994398.1                           T 84 I 1
s Capra_aegagrus.CM003241.1                               18829209 2 +  46296322 CA
i Capra_aegagrus.CM003241.1                              T 83 I 1
s Capra_hircus.CM004588.1                                 18059929 2 -  44709034 CA
i Capra_hircus.CM004588.1                                T 83 I 1
s Carlito_syrichta.NW_007259797.1                           140972 2 -    496798 CT
i Carlito_syrichta.NW_007259797.1                        T 83 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2810 2 -     11696 CC
i Carollia_perspicillata.CarPer_scaffold_92756           T 83 I 1
s Castor_canadensis.CasCan_scaffold_2074                    133578 2 +    179628 GC
i Castor_canadensis.CasCan_scaffold_2074                 T 80 I 1
s Catagonus_wagneri.CatWag_scaffold_2839                     89142 2 +    217609 CC
i Catagonus_wagneri.CatWag_scaffold_2839                 T 124 I 1
s Cavia_aperea.AVPZ01000300.1                             18347397 2 -  23392119 CC
i Cavia_aperea.AVPZ01000300.1                            T 82 I 1
s Cavia_porcellus.DS562891.1                              18359657 2 -  23407841 CC
i Cavia_porcellus.DS562891.1                             T 82 I 1
s Cavia_tschudii.CavTsc_scaffold_8919                        98532 2 +    143979 CT
i Cavia_tschudii.CavTsc_scaffold_8919                    T 82 I 1
s Cephalopachus_bancanus.k141_2037105                         4888 2 -      8605 CT
i Cephalopachus_bancanus.k141_2037105                    T 83 C 0
s Ceratotherium_simum.JH767749.1                          12227808 2 +  27778364 CC
i Ceratotherium_simum.JH767749.1                         T 83 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2526 2 -      3715 CC
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     T 83 I 1
s Cercocebus_atys.KQ010504.1                               4470218 2 +   4669795 CC
i Cercocebus_atys.KQ010504.1                             T 77 C 0
s Cercocebus_chrysogaster.k141_393940                         8767 2 -     19203 CC
i Cercocebus_chrysogaster.k141_393940                    T 77 C 0
s Cercocebus_lunulatus.k141_3846941                           3186 2 +      8260 CC
i Cercocebus_lunulatus.k141_3846941                      T 77 C 0
s Cercocebus_torquatus.k141_3057011                           3416 2 +     27781 CC
i Cercocebus_torquatus.k141_3057011                      T 77 C 0
s Cercopithecus_ascanius.k141_1024104                         3562 2 -     20310 CC
i Cercopithecus_ascanius.k141_1024104                    T 77 C 0
s Cercopithecus_cephus.k141_1078548                           6546 2 +     29689 CC
i Cercopithecus_cephus.k141_1078548                      T 77 C 0
s Cercopithecus_diana.k141_2427854                             899 2 +      9989 CC
i Cercopithecus_diana.k141_2427854                       T 77 C 0
s Cercopithecus_hamlyni.k141_187466                           9234 2 -     27936 CC
i Cercopithecus_hamlyni.k141_187466                      T 77 C 0
s Cercopithecus_lowei.k141_457449                             9253 2 -     11289 CC
i Cercopithecus_lowei.k141_457449                        T 77 C 0
s Cercopithecus_albogularis.ctg5                                38811629 2 +  39242232 CC
i Cercopithecus_albogularis.ctg5                               T 77 C 0
s Cercopithecus_mona.ctg39                                21217320 2 -  21565898 CC
i Cercopithecus_mona.ctg39                               T 77 C 0
s Cercopithecus_neglectus.k141_2526306                       34440 2 -     53127 CC
i Cercopithecus_neglectus.k141_2526306                   T 77 C 0
s Cercopithecus_nictitans.k141_3278028                        1732 2 +      7159 CC
i Cercopithecus_nictitans.k141_3278028                   T 77 C 0
s Cercopithecus_petaurista.k141_807961                        9245 2 -     27947 CC
i Cercopithecus_petaurista.k141_807961                   T 77 C 0
s Cercopithecus_pogonias.k141_822820                          9221 2 +     17596 CC
i Cercopithecus_pogonias.k141_822820                     T 77 C 0
s Cercopithecus_roloway.k141_3180641                         39715 2 -     41420 CC
i Cercopithecus_roloway.k141_3180641                     T 77 C 0
s Cheirogaleus_major.k141_333249                             16660 2 -     52598 CT
i Cheirogaleus_major.k141_333249                         T 66 C 0
s Cheirogaleus_medius.k141_1055463                           12009 2 +     57038 CT
i Cheirogaleus_medius.k141_1055463                       T 66 C 0
s Chinchilla_lanigera.JH722012.1                           1248429 2 +   2543920 CC
i Chinchilla_lanigera.JH722012.1                         T 80 I 1
s Chlorocebus_aethiops.ctg25                              18423184 2 -  18827391 CC
i Chlorocebus_aethiops.ctg25                             T 77 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9627 2 -     50209 CC
i Chlorocebus_pygerythrus.k141_1025673                   T 77 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416632 2 + 135778131 CC
i Chlorocebus_sabaeus.CM001947.1                         T 77 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15088 2 +     19366 CC
i Choloepus_didactylus.ChoDid_scaffold_45914             T 87 I 1
s Choloepus_hoffmanni.KN194906.1                            170187 2 +    839153 CC
i Choloepus_hoffmanni.KN194906.1                         T 87 I 1
s Colobus_angolensis.KN981557.1                            1905161 2 +   2368649 CC
i Colobus_angolensis.KN981557.1                          T 77 C 0
s Colobus_guereza.LG01                                   199944779 2 + 200372422 CC
i Colobus_guereza.LG01                                   T 129 C 0
s Colobus_polykomos.k141_906115                              31673 2 +     84244 CC
i Colobus_polykomos.k141_906115                          T 104 C 0
s Condylura_cristata.JH655891.1                           17545917 2 -  53390261 CA
i Condylura_cristata.JH655891.1                          T 82 I 1
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10429 2 -     20389 CC
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      T 80 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24170 2 -     87169 CC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         T 65 I 1
s Cuniculus_paca.CunPac_flattened_line_231100                 2781 2 +      5455 CC
i Cuniculus_paca.CunPac_flattened_line_231100            T 83 I 1
s Dasyprocta_punctata.DasPun_flattened_line_206793            1164 2 +      3576 CC
i Dasyprocta_punctata.DasPun_flattened_line_206793       T 83 I 1
s Dasypus_novemcinctus.JH564415.1                            61001 2 +   2246927 CC
i Dasypus_novemcinctus.JH564415.1                        T 85 I 1
s Daubentonia_madagascariensis.ctg71                      12532826 2 -  12879189 CT
i Daubentonia_madagascariensis.ctg71                     T 70 C 0
s Delphinapterus_leucas.KZ290073.1                        16811112 2 +  35494412 CA
i Delphinapterus_leucas.KZ290073.1                       T 83 I 1
s Desmodus_rotundus.KZ672289.1                             8627841 2 +  20541912 CC
i Desmodus_rotundus.KZ672289.1                           T 83 I 1
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669341 2 +   1390856 CC
i Dicerorhinus_sumatrensis.PEKH010002091.1               T 83 I 1
s Diceros_bicornis.DicBicMic_scaffold_5955                    2416 2 +    198055 CC
i Diceros_bicornis.DicBicMic_scaffold_5955               T 83 I 1
s Dipodomys_ordii.KN672350.1                              18895737 2 +  37912305 CC
i Dipodomys_ordii.KN672350.1                             T 83 I 1
s Dipodomys_stephensi.DipSte_scaffold_75855                  11947 2 +     14536 CC
i Dipodomys_stephensi.DipSte_scaffold_75855              T 83 I 1
s Dolichotis_patagonum.DolPat_scaffold_30833                 31421 2 -     42551 CC
i Dolichotis_patagonum.DolPat_scaffold_30833             T 83 I 1
s Eidolon_helvum.KE759718.1                                   7348 2 +     11740 CC
i Eidolon_helvum.KE759718.1                              T 82 I 1
s Elaphurus_davidianus.JRFZ01104969.1                       310213 2 +    607251 CC
i Elaphurus_davidianus.JRFZ01104969.1                    T 83 I 1
s Elephantulus_edwardii.JH947257.1                         1088936 2 +  10337057 CC
i Elephantulus_edwardii.JH947257.1                       T 82 I 1
s Enhydra_lutris.KZ291758.1                               16325702 2 -  41312741 CC
i Enhydra_lutris.KZ291758.1                              T 81 I 1
s Eptesicus_fuscus.JH977646.1                              2143998 2 -  14770903 CC
i Eptesicus_fuscus.JH977646.1                            T 83 I 1
s Equus_asinus.JREZ01000139.1                              1279683 2 +   4378816 CC
i Equus_asinus.JREZ01000139.1                            T 83 I 1
s Equus_caballus.CM000403.2                               18527504 2 -  39960074 CC
i Equus_caballus.CM000403.2                              T 83 I 1
s Equus_przewalskii.KK951119.1                               29519 2 +    498745 CC
i Equus_przewalskii.KK951119.1                           T 83 I 1
s Erythrocebus_patas.Contig38                             21199863 2 -  21539334 CC
i Erythrocebus_patas.Contig38                            T 77 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10788 2 +    133382 CC
i Eschrichtius_robustus.EscRob_flattened_line_8968       T 83 I 1
s Eubalaena_japonica.EubJap_flattened_line_31514             24725 2 -     44125 CC
i Eubalaena_japonica.EubJap_flattened_line_31514         T 83 I 1
s Felis_catus.AANG03299807.1                                   347 2 -       507 CC
i Felis_catus.AANG03299807.1                             T 65 I 1
s Felis_catus_fca126.CM031415.1                           20191925 2 + 205367284 CC
i Felis_catus_fca126.CM031415.1                          T 65 I 1
s Felis_nigripes.FelNig_flattened_line_20823                  5450 2 -     36744 CC
i Felis_nigripes.FelNig_flattened_line_20823             T 65 I 1
s Fukomys_damarensis.KN121974.1                             848431 2 +   3816255 CC
i Fukomys_damarensis.KN121974.1                          T 83 I 1
s Galeopterus_variegatus.GalVar_scaffold_56069               25395 2 +     26054 CC
i Galeopterus_variegatus.GalVar_scaffold_56069           T 83 I 1
s Glis_glis.GliGli_scaffold_19807                            30286 2 +     49224 CC
i Glis_glis.GliGli_scaffold_19807                        T 77 I 1
s Gorilla_beringei.k141_3596273                              10492 2 -     32273 CC
i Gorilla_beringei.k141_3596273                          C 0 T 140
s Gorilla_gorilla.LT578341.1                             186332642 2 + 186649187 CC
i Gorilla_gorilla.LT578341.1                             I 183 T 140
s Graphiurus_murinus.GraMur_scaffold_10447                   30015 1 +     78134 G-
i Graphiurus_murinus.GraMur_scaffold_10447               T 75 I 1
s Helogale_parvula.HelPar_flattened_line_2585               238087 2 +    327341 CC
i Helogale_parvula.HelPar_flattened_line_2585            T 65 I 1
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17413 2 +     36099 CA
i Hemitragus_hylocrius.HemHyl_scaffold_45859             T 83 I 1
s Heterocephalus_glaber.JH602082.1                        20659310 2 +  22651954 CC
i Heterocephalus_glaber.JH602082.1                       T 83 I 1
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 173 2 +       961 CC
i Heterohyrax_brucei.HetBruBak_scaffold_383740           T 82 I 1
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111968 2 +    128679 CC
i Hippopotamus_amphibius.HipAmp_scaffold_9076            T 83 I 1
s Hipposideros_armiger.JXIK01000431.1                       108307 2 +   1711038 CC
i Hipposideros_armiger.JXIK01000431.1                    T 82 I 1
s Hipposideros_galeritus.HipGal_scaffold_29171               39748 2 +     43066 CT
i Hipposideros_galeritus.HipGal_scaffold_29171           T 82 I 1
s Hoolock_leuconedys.ctg274                                    429191 2 +    630532 CC
i Hoolock_leuconedys.ctg274                                 T 206 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40552 2 +     55795 CC
i Hyaena_hyaena.HyaHya_flattened_line_26932              T 65 I 1
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19779 2 -    143317 CC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        T 83 I 1
s Hylobates_agilis.k141_307679                               12109 2 -     15490 CC
i Hylobates_agilis.k141_307679                           T 206 C 0
s Hylobates_klossii.k141_282416                              54114 2 +     67168 CC
i Hylobates_klossii.k141_282416                          T 206 C 0
s Hylobates_pileatus_b.LG02                                     189537767 2 - 191637585 CC
i Hylobates_pileatus_b.LG02                                     T 205 C 0
s Hylobates_pileatus_a.tarseq_633                            3330659 2 -  11177569 CC
i Hylobates_pileatus_a.tarseq_633                          T 206 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80853 2 +    135385 CC
i Hystrix_cristata.HysCri_scaffold_5660                  T 83 I 1
s Ictidomys_tridecemlineatus.JH393364.1                    7514520 2 -   7955117 CC
i Ictidomys_tridecemlineatus.JH393364.1                  T 78 I 1
s Indri_indri.k141_3655594                                   18098 2 +     31101 CT
i Indri_indri.k141_3655594                               T 70 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22329 2 +     23964 CA
i Inia_geoffrensis.IniGeo_flattened_line_48101           T 83 I 1
s Jaculus_jaculus.JH725527.1                               8271296 2 -   9596543 CA
i Jaculus_jaculus.JH725527.1                             T 87 I 5
s Kogia_breviceps.KogBre_flattened_line_192630                1596 2 -      3359 CC
i Kogia_breviceps.KogBre_flattened_line_192630           T 83 I 1
s Lasiurus_borealis.LasBor_scaffold_50988                    11863 2 +     29960 CC
i Lasiurus_borealis.LasBor_scaffold_50988                T 40 I 26
s Lepilemur_ankaranensis.k141_596936                          6732 2 -     23766 CT
i Lepilemur_ankaranensis.k141_596936                     T 70 C 0
s Lepilemur_dorsalis.k141_577674                             24679 2 +     45836 CT
i Lepilemur_dorsalis.k141_577674                         T 70 C 0
s Lepilemur_ruficaudatus.k141_420445                         31590 2 -     32627 AT
i Lepilemur_ruficaudatus.k141_420445                     T 70 C 0
s Lepilemur_septentrionalis.k141_185316                      22734 2 +     54090 CT
i Lepilemur_septentrionalis.k141_185316                  T 70 C 0
s Leptonychotes_weddellii.KB714746.1                       3036035 2 +   3914936 CC
i Leptonychotes_weddellii.KB714746.1                     T 84 I 1
s Lipotes_vexillifer.KE559953.1                             267410 2 -    662738 CA
i Lipotes_vexillifer.KE559953.1                          T 80 I 1
s Lophocebus_aterrimus.ctg367                              1431388 2 +   1826925 CC
i Lophocebus_aterrimus.ctg367                            T 78 C 0
s Loris_lydekkerianus.k141_2539221                             631 2 +     11245 CC
i Loris_lydekkerianus.k141_2539221                       T 65 C 0
s Loris_tardigradus.ctg83                                   999466 2 +   6120653 CC
i Loris_tardigradus.ctg83                                T 66 C 0
s Loxodonta_africana.GL010049.1                            4214446 2 -  43346337 TC
i Loxodonta_africana.GL010049.1                          T 82 I 1
s Lycaon_pictus.CM007581.1                                17951652 2 -  59628241 CC
i Lycaon_pictus.CM007581.1                               T 84 I 1
s Macaca_arctoides.k141_2326796                               1573 2 +     40492 CC
i Macaca_arctoides.k141_2326796                          T 77 C 0
s Macaca_assamensis.Contig5                               59670833 2 +  60120075 CC
i Macaca_assamensis.Contig5                              T 77 C 0
s Macaca_cyclopis.k119_18836                                  7331 2 -     26193 CC
i Macaca_cyclopis.k119_18836                             T 77 C 0
s Macaca_fascicularis.k141_814140                            75125 2 -    114318 CC
i Macaca_fascicularis.k141_814140                        T 77 C 0
s Macaca_fuscata.k119_255327                                   844 2 -     23192 CC
i Macaca_fuscata.k119_255327                             T 77 C 0
s Macaca_leonina.k141_3550399                                10297 2 -     29190 CC
i Macaca_leonina.k141_3550399                            T 77 C 0
s Macaca_maura.k141_2733130                                  18864 2 +     37952 CC
i Macaca_maura.k141_2733130                              T 77 C 0
s Macaca_mulatta.NC_041758.1                             186833952 2 + 187317192 CC
i Macaca_mulatta.NC_041758.1                             T 77 C 0
s Macaca_nemestrina.KQ007038.1                            25452513 2 -  25927173 CC
i Macaca_nemestrina.KQ007038.1                           T 77 C 0
s Macaca_nigra.k141_1655396                                  74713 2 +     89720 CC
i Macaca_nigra.k141_1655396                              T 77 C 0
s Macaca_radiata.k141_3680011                                 1710 2 +     20474 CC
i Macaca_radiata.k141_3680011                            T 77 C 0
s Macaca_siberu.k141_635500                                   1511 2 -     14993 CC
i Macaca_siberu.k141_635500                              T 77 C 0
s Macaca_silenus.Contig273                                  324384 2 -    668171 CC
i Macaca_silenus.Contig273                               T 77 C 0
s Macaca_thibetana.k99_7456                                  15653 2 -     15935 CC
i Macaca_thibetana.k99_7456                              T 77 C 0
s Macaca_tonkeana.k141_1498238                               20450 2 -     45290 CC
i Macaca_tonkeana.k141_1498238                           T 77 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87495 2 +     94391 CC
i Macroglossus_sobrinus.MacSob_scaffold_8222             T 81 I 1
s Mandrillus_leucophaeus.scaffold280                      23932005 2 -  24302211 CC
i Mandrillus_leucophaeus.scaffold280                     T 77 C 0
s Mandrillus_sphinx.Contig270                               346183 2 +    752769 CC
i Mandrillus_sphinx.Contig270                            T 77 C 0
s Manis_javanica.JSZB01003497.1                              15540 2 +    737560 CC
i Manis_javanica.JSZB01003497.1                          T 81 I 1
s Manis_pentadactyla.KN006162.1                              46929 2 -    317179 CC
i Manis_pentadactyla.KN006162.1                          T 81 I 1
s Marmota_marmota.CZRN01000018.1                          33097370 2 -  40650429 CC
i Marmota_marmota.CZRN01000018.1                         T 78 I 1
s Megaderma_lyra.MegLyr_scaffold_4542                         6727 2 -    207569 CC
i Megaderma_lyra.MegLyr_scaffold_4542                    T 64 I 1
s Mellivora_capensis.MelCap_flattened_line_69365              6166 2 +     13704 CC
i Mellivora_capensis.MelCap_flattened_line_69365         T 84 I 1
s Mesoplodon_bidens.MesBid_scaffold_108144                    2997 2 +     10310 CC
i Mesoplodon_bidens.MesBid_scaffold_108144               T 83 I 1
s Microcebus_murinus.CM007674.1                           18283258 2 -  93316391 CT
i Microcebus_murinus.CM007674.1                          T 70 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13352 2 -     19307 CC
i Micronycteris_hirsuta.MicHir_scaffold_52381            T 83 I 1
s Miniopterus_natalensis.LDJU01000034.1                    1849026 2 +   8254450 CC
i Miniopterus_natalensis.LDJU01000034.1                  T 83 I 1
s Miniopterus_schreibersii.MinSch_scaffold_18080             32902 2 +     64694 CC
i Miniopterus_schreibersii.MinSch_scaffold_18080         T 83 I 1
s Miopithecus_ogouensis.k141_534055                           3740 2 -     28506 CC
i Miopithecus_ogouensis.k141_534055                      T 77 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62365 2 -     63350 CC
i Mirounga_angustirostris.MirAng_flattened_line_22144    T 84 I 1
s Mirza_zaza.k141_952172                                      4613 2 -     37649 CT
i Mirza_zaza.k141_952172                                 T 69 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26502 2 -    437263 CA
i Monodon_monoceros.MonMon_M_scaffold_103                T 83 I 1
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137758 2 -    366855 CC
i Mormoops_blainvillei.MorMeg_scaffold_1417              T 83 I 1
s Moschus_moschiferus.MosMos_scaffold_61429                  27353 2 -     27816 CA
i Moschus_moschiferus.MosMos_scaffold_61429              T 81 I 1
s Mungos_mungo.MunMun_flattened_line_23663                   31288 2 +     37127 CC
i Mungos_mungo.MunMun_flattened_line_23663               T 65 I 1
s Muscardinus_avellanarius.MusAve_scaffold_82313              2279 2 +     14296 CC
i Muscardinus_avellanarius.MusAve_scaffold_82313         T 77 I 1
s Mustela_putorius.JH418006.1                               297597 2 -  14710649 CC
i Mustela_putorius.JH418006.1                            T 84 I 1
s Myotis_brandtii.KE162005.1                                278233 2 -  10118263 CC
i Myotis_brandtii.KE162005.1                             T 72 I 1
s Myotis_davidii.KB100139.1                                1585790 2 -   6019432 CC
i Myotis_davidii.KB100139.1                              T 72 I 1
s Myotis_lucifugus.GL429869.1                              3901999 2 -   4330536 CC
i Myotis_lucifugus.GL429869.1                            T 72 I 1
s Myotis_myotis.MyoMyo_scaffold_28916                        32558 2 +     33610 CC
i Myotis_myotis.MyoMyo_scaffold_28916                    T 72 I 1
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186039 2 +    196477 TC
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           T 87 I 1
s Nasalis_larvatus.k141_413338                                9753 2 +     21681 CC
i Nasalis_larvatus.k141_413338                           T 77 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865458 2 +   7148211 CA
i Neophocaena_asiaeorientalis.KZ687982.1                 T 83 I 1
s Noctilio_leporinus.NocLep_scaffold_251                    756323 2 +    783361 CC
i Noctilio_leporinus.NocLep_scaffold_251                 T 82 I 1
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145913 2 -   9404916 CC
i Nyctereutes_procyonoides.CAJHUB010000658.1             T 84 I 1
s Nycticebus_bengalensis.LG01                            102574435 2 - 196305487 CC
i Nycticebus_bengalensis.LG01                            T 65 C 0
s Nycticebus_coucang.k141_5327727                             2121 2 +      8486 CC
i Nycticebus_coucang.k141_5327727                        T 65 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744862 2 + 199412804 CC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       T 65 C 0
s Ochotona_princeps.JH802162.1                             1355694 2 +   3988456 TA
i Ochotona_princeps.JH802162.1                           T 71 I 1
s Odobenus_rosmarus.KB229312.1                              500654 2 -   2017862 CC
i Odobenus_rosmarus.KB229312.1                           T 84 I 1
s Odocoileus_virginianus.KZ100018.1                         144586 2 +    630418 CC
i Odocoileus_virginianus.KZ100018.1                      T 82 I 1
s Orcinus_orca.KB316932.1                                  2781373 2 -  10937097 CA
i Orcinus_orca.KB316932.1                                T 83 I 1
s Orycteropus_afer.OryAfe_flattened_line_144387               6771 2 -     18566 CC
i Orycteropus_afer.OryAfe_flattened_line_144387          T 82 I 1
s Otocyon_megalotis.JAEUCK010005147.1                       458667 2 -    559221 CC
i Otocyon_megalotis.JAEUCK010005147.1                    T 84 I 1
s Ovis_aries.CM001607.2                                   17584944 2 +  44047080 CA
i Ovis_aries.CM001607.2                                  T 83 I 1
s Ovis_canadensis.OviCan_scaffold_2572                      173365 2 -    191736 CA
i Ovis_canadensis.OviCan_scaffold_2572                   T 83 I 1
s Pan_paniscus.KQ411613.1                                    36136 2 +     80009 CC
i Pan_paniscus.KQ411613.1                                T 2338 I 2405
s Pan_troglodytes.CM009242.2                             189137088 2 + 189151597 CC
i Pan_troglodytes.CM009242.2                             T 139 I 208
s Panthera_onca.PanOnc_flattened_line_3271                  147072 2 +    230217 CC
i Panthera_onca.PanOnc_flattened_line_3271               T 65 I 1
s Panthera_pardus.KV860321.1                                259781 2 +  18783137 CC
i Panthera_pardus.KV860321.1                             T 65 I 1
s Panthera_tigris.KE722367.1                               4716928 2 -   8748460 CC
i Panthera_tigris.KE722367.1                             T 65 I 1
s Pantholops_hodgsonii.KE114653.1                          1264298 2 -   2937107 CA
i Pantholops_hodgsonii.KE114653.1                        T 83 I 1
s Papio_anubis.CM001495.2                                183437327 2 + 183742232 CC
i Papio_anubis.CM001495.2                                T 77 C 0
s Papio_cynocephalus.k141_4307930                             1392 2 +     20448 CC
i Papio_cynocephalus.k141_4307930                        T 170 C 0
s Papio_hamadryas.Contig39                                20558011 2 +  20919399 CC
i Papio_hamadryas.Contig39                               T 77 C 0
s Papio_kindae.k141_1936966                                    135 2 +     41871 CC
i Papio_kindae.k141_1936966                              T 170 C 0
s Papio_ursinus.k141_3428135                                  3413 2 +      9205 CC
i Papio_ursinus.k141_3428135                             T 77 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8807 2 -     78924 TC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 T 65 I 1
s Perodicticus_ibeanus.k141_855320                            4612 2 +     13100 CC
i Perodicticus_ibeanus.k141_855320                       T 70 C 0
s Perodicticus_potto.k141_1092580                             2980 2 +     25941 CC
i Perodicticus_potto.k141_1092580                        T 70 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25294 2 +     32600 CC
i Perognathus_longimembris.PerPac_flattened_line_34437   T 22 I 1
s Petromus_typicus.PetTyp_scaffold_42190                     25779 2 -     29689 CC
i Petromus_typicus.PetTyp_scaffold_42190                 T 81 I 1
s Phocoena_phocoena.PhoPho_flattened_line_24159               8420 2 +     63832 CA
i Phocoena_phocoena.PhoPho_flattened_line_24159          T 83 I 1
s Piliocolobus_badius.k141_1234363                           38269 2 +     62158 CC
i Piliocolobus_badius.k141_1234363                       T 77 C 0
s Piliocolobus_gordonorum.k141_381342                        32996 2 +     89929 CC
i Piliocolobus_gordonorum.k141_381342                    T 77 C 0
s Piliocolobus_kirkii.k141_448987                            34412 2 +     51399 CC
i Piliocolobus_kirkii.k141_448987                        T 77 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290633 2 -  14605196 CC
i Piliocolobus_tephrosceles.PDMG02000141.1               T 77 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              372 2 +     22620 CC
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        T 83 I 1
s Platanista_gangetica.PlaMin_flattened_line_32310           34126 2 +     35617 TC
i Platanista_gangetica.PlaMin_flattened_line_32310       T 83 I 1
s Pongo_abelii.CM009266.2                                189125174 2 + 189387572 CC
i Pongo_abelii.CM009266.2                                T 513 I 309
s Pongo_pygmaeus.ctg66                                     9565017 2 +   9816681 CC
i Pongo_pygmaeus.ctg66                                   T 274 I 70
s Presbytis_comata.k141_677006                               67913 2 -     81375 CC
i Presbytis_comata.k141_677006                           T 77 C 0
s Presbytis_mitrata.k141_2342859                              9740 2 +     10147 CC
i Presbytis_mitrata.k141_2342859                         T 77 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9934 2 -     22811 CC
i Procavia_capensis.ProCapCap_scaffold_85530             T 82 I 1
s Propithecus_coquerelli.NW_012148875.1                     986312 2 +   2598838 CT
i Propithecus_coquerelli.NW_012148875.1                  T 67 C 0
s Propithecus_coronatus.k141_347390                          24601 2 +     38485 CT
i Propithecus_coronatus.k141_347390                      T 67 C 0
s Propithecus_diadema.k141_357118                              762 2 +      4256 CT
i Propithecus_diadema.k141_357118                        T 67 C 0
s Propithecus_edwardsi.k141_1176054                          22120 2 +     35766 CT
i Propithecus_edwardsi.k141_1176054                      T 67 C 0
s Propithecus_perrieri.k141_1200571                            303 2 -     24134 CT
i Propithecus_perrieri.k141_1200571                      T 67 C 0
s Propithecus_tattersalli.k141_790011                        24115 2 -     67325 CT
i Propithecus_tattersalli.k141_790011                    T 67 C 0
s Propithecus_verreauxi.k141_956661                            360 2 -      6182 CT
i Propithecus_verreauxi.k141_956661                      T 67 C 0
s Pteronotus_parnellii.KE909381.1                            11140 2 -     21811 CT
i Pteronotus_parnellii.KE909381.1                        T 88 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36608 2 +     42204 CC
i Pteronura_brasiliensis.PteBra_flattened_line_31117     T 84 I 1
s Pteropus_alecto.KB030862.1                              22973618 2 +  28871421 CC
i Pteropus_alecto.KB030862.1                             T 81 I 1
s Pteropus_vampyrus.KN534172.1                                1555 2 -      8028 CC
i Pteropus_vampyrus.KN534172.1                           T 81 I 1
s Puma_concolor.QAVW01001104.1                            20270239 2 -  38429054 CC
i Puma_concolor.QAVW01001104.1                           T 65 I 1
s Pygathrix_cinerea.k141_1153803                              9742 2 -     91421 CC
i Pygathrix_cinerea.k141_1153803                         T 77 C 0
s Pygathrix_nigripes_b.ctg100                                 7603876 2 +   7812017 CC
i Pygathrix_nigripes_b.ctg100                               T 77 C 0
s Pygathrix_nigripes_a.k141_215492                              9715 2 -     72585 CC
i Pygathrix_nigripes_a.k141_215492                         T 77 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4834 2 +     55207 CC
i Rangifer_tarandus.RanTarSib_scaffold_29737             T 82 I 1
s Rhinolophus_sinicus.LVEH01000134.1                        366851 2 -   3329780 CC
i Rhinolophus_sinicus.LVEH01000134.1                     T 83 I 1
s Rhinopithecus_bieti.k119_217274                             1128 2 -     11128 CC
i Rhinopithecus_bieti.k119_217274                        T 377 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230505 2 - 195417433 CC
i Rhinopithecus_roxellana.NC_044550.1                    T 357 C 0
s Rhinopithecus_strykeri.ctg102                            7666213 2 +   7961872 CC
i Rhinopithecus_strykeri.ctg102                          T 297 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84603 2 -     96226 CC
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            T 82 I 1
s Saiga_tatarica.SaiTat_scaffold_373180                       3487 2 +      4321 CA
i Saiga_tatarica.SaiTat_scaffold_373180                  T 82 I 1
s Semnopithecus_entellus.k141_11662                          14257 2 -     19888 CC
i Semnopithecus_entellus.k141_11662                      T 77 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21462 2 +     39453 CC
i Semnopithecus_hypoleucos.k141_1615806                  T 77 C 0
s Semnopithecus_johnii.k141_670120                            1986 2 +     27826 CC
i Semnopithecus_johnii.k141_670120                       T 77 C 0
s Semnopithecus_priam.k141_638794                             1508 2 -     19483 CC
i Semnopithecus_priam.k141_638794                        T 77 C 0
s Semnopithecus_schistaceus.k141_1584426                      1570 2 +      7198 CC
i Semnopithecus_schistaceus.k141_1584426                 T 77 C 0
s Semnopithecus_vetulus.k141_1200928                          9830 2 +     15514 CC
i Semnopithecus_vetulus.k141_1200928                     T 77 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187623 2 -    191337 TG
i Solenodon_paradoxus.SolPar_flattened_line_5840         T 83 I 1
s Spermophilus_dauricus.KZ294078.1                         1948162 2 -   3870691 CC
i Spermophilus_dauricus.KZ294078.1                       T 78 I 1
s Spilogale_gracilis.SpiGra_flattened_line_13525             27151 2 +     97271 CC
i Spilogale_gracilis.SpiGra_flattened_line_13525         T 83 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14157 2 -    196729 CC
i Suricata_suricatta.SurSur_flattened_line_6629          T 65 I 1
s Sus_scrofa.CM000828.4                                   62882405 2 -  69701581 CC
i Sus_scrofa.CM000828.4                                  T 70 I 1
s Symphalangus_syndactylus.tarseq_199                      1087806 2 -   1523678 CC
i Symphalangus_syndactylus.tarseq_199                    T 207 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6756 2 +     41958 CC
i Tadarida_brasiliensis.TadBra_scaffold_25820            T 82 I 1
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69401 2 +    116680 TC
i Tamandua_tetradactyla.TamTet_scaffold_1782             T 87 I 1
s Tapirus_indicus.TapInd_scaffold_9301                      115138 2 -    156842 CC
i Tapirus_indicus.TapInd_scaffold_9301                   T 83 I 1
s Tapirus_terrestris.TapTer_scaffold_755                    383593 2 +    539355 CC
i Tapirus_terrestris.TapTer_scaffold_755                 T 83 I 1
s Tarsius_lariang.k141_2201908                               10587 2 +     70052 CT
i Tarsius_lariang.k141_2201908                           T 83 C 0
s Tarsius_wallacei.k141_780063                               14892 2 +     25099 CT
i Tarsius_wallacei.k141_780063                           T 83 C 0
s Theropithecus_gelada.CM009954.1                        186422836 2 + 186847797 CC
i Theropithecus_gelada.CM009954.1                        T 77 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103120 2 +    114563 TC
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           T 82 I 1
s Tonatia_saurophila.TonSau_scaffold_294                     78896 2 +    610378 CC
i Tonatia_saurophila.TonSau_scaffold_294                 T 83 I 1
s Trachypithecus_auratus.k141_722599                          5567 2 -     20410 CC
i Trachypithecus_auratus.k141_722599                     T 74 C 0
s Trachypithecus_crepusculus.k141_1194022                     9759 2 +     15221 CC
i Trachypithecus_crepusculus.k141_1194022                T 77 C 0
s Trachypithecus_cristatus.k141_580354                        5667 2 +     19930 CC
i Trachypithecus_cristatus.k141_580354                   T 74 C 0
s Trachypithecus_francoisi.k141_1412647                       2094 2 -     19997 CC
i Trachypithecus_francoisi.k141_1412647                  T 77 C 0
s Trachypithecus_geei.k141_277701                            42213 2 -     60166 CC
i Trachypithecus_geei.k141_277701                        T 77 C 0
s Trachypithecus_germaini.k141_912491                         9685 2 -     27529 CC
i Trachypithecus_germaini.k141_912491                    T 77 C 0
s Trachypithecus_hatinhensis.k141_143409                      9625 2 -     18194 CC
i Trachypithecus_hatinhensis.k141_143409                 T 77 C 0
s Trachypithecus_laotum.k141_907409                           3361 2 -     21137 CC
i Trachypithecus_laotum.k141_907409                      T 77 C 0
s Trachypithecus_leucocephalus.k141_587342                    2063 2 -     10723 CC
i Trachypithecus_leucocephalus.k141_587342               T 77 C 0
s Trachypithecus_melamera.k141_434728                         1216 2 +      9834 CC
i Trachypithecus_melamera.k141_434728                    T 77 C 0
s Trachypithecus_obscurus.k141_190785                        19534 2 +     32220 CC
i Trachypithecus_obscurus.k141_190785                    T 77 C 0
s Trachypithecus_phayrei.ctg124                            5933631 2 +   6242583 CC
i Trachypithecus_phayrei.ctg124                          T 77 C 0
s Trachypithecus_pileatus.k141_2007326                        2876 2 +     20839 CC
i Trachypithecus_pileatus.k141_2007326                   T 77 C 0
s Tragulus_javanicus.TraJav_scaffold_124071                    833 2 -      2171 CA
i Tragulus_javanicus.TraJav_scaffold_124071              T 2 I 217
s Tupaia_chinensis.KB320699.1                              2149523 2 +   4065304 TC
i Tupaia_chinensis.KB320699.1                            T 109 I 1
s Tupaia_tana.TupTan_flattened_line_97126                     3142 2 -     10553 TC
i Tupaia_tana.TupTan_flattened_line_97126                T 81 I 1
s Tursiops_truncatus.MRVK01000835.1                       15737620 2 +  33153633 CA
i Tursiops_truncatus.MRVK01000835.1                      T 83 I 1
s Uropsilus_gracilis.UroGra_scaffold_97021                    1851 2 -      4736 CC
i Uropsilus_gracilis.UroGra_scaffold_97021               T 83 I 1
s Ursus_maritimus.KK499267.1                               4846851 2 -   5085361 CC
i Ursus_maritimus.KK499267.1                             T 84 I 1
s Vicugna_pacos.KN270157.1                                 5368324 2 -   5488506 CC
i Vicugna_pacos.KN270157.1                               T 83 I 1
s Vulpes_lagopus.VulLag_flattened_line_30954                  7328 2 -     43706 CC
i Vulpes_lagopus.VulLag_flattened_line_30954             T 84 I 1
s Xerus_inauris.XerIna_scaffold_48378                        19657 2 -     24430 CC
i Xerus_inauris.XerIna_scaffold_48378                    T 78 I 1
s Zalophus_californianus.ZalCal_flattened_line_63728          1776 2 +      2932 CC
i Zalophus_californianus.ZalCal_flattened_line_63728     T 84 I 1
s Zapus_hudsonius.ZapHud_scaffold_11398                       9930 2 +     63895 CA
i Zapus_hudsonius.ZapHud_scaffold_11398                  T 86 I 5
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11312 2 +     12536 CC
i Ziphius_cavirostris.ZipCav_flattened_line_71469        T 83 I 1
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Varecia_variegata.k141_1128296                              7155 0 +     24756 C
e Varecia_rubra.k141_590885                                   7107 0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   1874 68 +      8208 T
e Sorex_araneus.JH798187.1                                13647036 64 -  18376816 T
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    151381 45 -    313613 T
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414 0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Papio_papio.k141_802527                                     3591 59 +     27711 T
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.KL204047.1                            2025524 76 -   3037898 T
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5135 74 +     14753 T
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    15418 9 -    145209 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Lemur_catta.scaffold_24                                 15519761 0 -  30322482 C
e Hapalemur_occidentalis.k141_907772                          9234 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402 0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298 0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517 0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galagoides_demidoff.k141_31856                              3212 81 -      3432 T
e Eulemur_sanfordi.k141_1122526                               9432 0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267 0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247 0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321 0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369 0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369 0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184 0 -     25546 C
e Eulemur_collaris.k141_377015                                2154 0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453 0 -     14127 C
e Erinaceus_europaeus.JH835339.1                           3325355 79 -   7059049 T
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Dinomys_branickii.DinBra_scaffold_21862                    34287 77 +     67921 T
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Crocidura_indochinensis.CroInd_scaffold_287352               379 52 +      4208 T
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            4816 68 -      6351 T
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1262 2 +     62944 TG
s Acinonyx_jubatus.LLWD01001279.1                           823228 2 -   1699592 AC
i Acinonyx_jubatus.LLWD01001279.1                        I 1 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506920 2 -  29979442 AC
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 1 I 3
s Ailurus_fulgens.LNAC01001112.1                             75143 2 -    347723 AC
i Ailurus_fulgens.LNAC01001112.1                         I 1 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64923 2 -     89534 AG
i Allactaga_bullata.AllBul_scaffold_9566                 I 5 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9249 2 -     52922 TG
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9176 2 -     28001 TG
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9302 2 -      9772 TG
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            459 2 -     12518 TG
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675094 2 -   2318259 AG
i Ammotragus_lervia.NIVO01071767.1                       I 1 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183043 2 +    412891 AC
i Anoura_caudifer.AnoCau_scaffold_1412                   I 1 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97546 2 -    100397 AG
i Antilocapra_americana.AntAmePen_scaffold_12469         I 1 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7203 2 +     20879 GG
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 1 C 0
s Arctocebus_calabarensis.k141_288239                        14381 2 +     17124 AA
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2395 2 +     43469 AG
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 1 C 0
s Avahi_laniger.k141_765380                                  49243 2 -     92717 GG
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              49868 2 +     85213 GG
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191479 2 +  23207421 AG
i Balaenoptera_acutorostrata.KI537508.1                  I 1 C 0
s Balaenoptera_bonaerensis.DF707048.1                         1945 2 -     18090 AG
i Balaenoptera_bonaerensis.DF707048.1                    I 1 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26016 2 +     34529 GG
i Beatragus_hunteri.BeaHun_scaffold_50177                I 1 C 0
s Bison_bison.KN261452.1                                    199055 2 -    288883 AG
i Bison_bison.KN261452.1                                 I 1 C 0
s Bos_indicus.CM003047.1                                  20272260 2 +  48749331 AG
i Bos_indicus.CM003047.1                                 I 1 C 0
s Bos_mutus.JH880303.1                                     1124820 2 -   1948126 AG
i Bos_mutus.JH880303.1                                   I 1 C 0
s Bos_taurus.CM000203.6                                   18082898 2 +  45695690 AG
i Bos_taurus.CM000203.6                                  I 1 C 0
s Bubalus_bubalis.KI419123.1                               2818387 2 +   4408762 AG
i Bubalus_bubalis.KI419123.1                             I 1 C 0
s Camelus_bactrianus.KN276810.1                            9998838 2 -  17673402 AG
i Camelus_bactrianus.KN276810.1                          I 1 C 0
s Camelus_dromedarius.KN272107.1                           2331302 2 -   7040546 AG
i Camelus_dromedarius.KN272107.1                         I 1 C 0
s Camelus_ferus.KB017975.1                                  399578 2 -   1652518 AG
i Camelus_ferus.KB017975.1                               I 1 C 0
s CanFam4.chr16                                           17795707 2 -  60362399 GC
i CanFam4.chr16                                          I 1 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181764 2 -    185531 GC
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 1 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031151 2 -   9314153 GC
i Canis_lupus_dingo.QKWQ01000480.1                       I 1 C 0
s Canis_lupus_familiaris.chr16                            17955415 2 -  59632846 GC
i Canis_lupus_familiaris.chr16                           I 1 C 0
s Canis_lupus_orion.HG994398.1                            18496716 2 +  63665305 GC
i Canis_lupus_orion.HG994398.1                           I 1 C 0
s Capra_aegagrus.CM003241.1                               18829212 2 +  46296322 AG
i Capra_aegagrus.CM003241.1                              I 1 C 0
s Capra_hircus.CM004588.1                                 18059932 2 -  44709034 AG
i Capra_hircus.CM004588.1                                I 1 C 0
s Carlito_syrichta.NW_007259797.1                           140974 2 -    496798 GG
i Carlito_syrichta.NW_007259797.1                        C 0 I 1
s Carollia_perspicillata.CarPer_scaffold_92756                2813 2 -     11696 AG
i Carollia_perspicillata.CarPer_scaffold_92756           I 1 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133581 2 +    179628 GG
i Castor_canadensis.CasCan_scaffold_2074                 I 1 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89145 2 +    217609 AG
i Catagonus_wagneri.CatWag_scaffold_2839                 I 1 C 0
s Cavia_aperea.AVPZ01000300.1                             18347400 2 -  23392119 GG
i Cavia_aperea.AVPZ01000300.1                            I 1 C 0
s Cavia_porcellus.DS562891.1                              18359660 2 -  23407841 GG
i Cavia_porcellus.DS562891.1                             I 1 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98535 2 +    143979 GG
i Cavia_tschudii.CavTsc_scaffold_8919                    I 1 C 0
s Cephalopachus_bancanus.k141_2037105                         4890 2 -      8605 GG
i Cephalopachus_bancanus.k141_2037105                    C 0 I 1
s Ceratotherium_simum.JH767749.1                          12227811 2 +  27778364 AG
i Ceratotherium_simum.JH767749.1                         I 1 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2529 2 -      3715 AG
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     I 1 C 0
s Cercocebus_atys.KQ010504.1                               4470220 2 +   4669795 TG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8769 2 -     19203 TG
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3188 2 +      8260 TG
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3418 2 +     27781 TG
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3564 2 -     20310 TG
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6548 2 +     29689 TG
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             901 2 +      9989 CG
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9236 2 -     27936 TG
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9255 2 -     11289 TG
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811631 2 +  39242232 TG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217322 2 -  21565898 TG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34442 2 -     53127 TG
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1734 2 +      7159 TG
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9247 2 -     27947 TG
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9223 2 +     17596 TG
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39717 2 -     41420 TG
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Cheirogaleus_major.k141_333249                             16662 2 -     52598 GG
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12011 2 +     57038 GG
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1248432 2 +   2543920 GG
i Chinchilla_lanigera.JH722012.1                         I 1 C 0
s Chlorocebus_aethiops.ctg25                              18423186 2 -  18827391 TG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9629 2 -     50209 TG
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416634 2 + 135778131 TG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15091 2 +     19366 GA
i Choloepus_didactylus.ChoDid_scaffold_45914             I 1 C 0
s Choloepus_hoffmanni.KN194906.1                            170190 2 +    839153 GA
i Choloepus_hoffmanni.KN194906.1                         I 1 C 0
s Colobus_angolensis.KN981557.1                            1905163 2 +   2368649 TG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944781 2 + 200372422 TG
i Colobus_guereza.LG01                                   C 0 I 27
s Colobus_polykomos.k141_906115                              31675 2 +     84244 TG
i Colobus_polykomos.k141_906115                          C 0 I 27
s Condylura_cristata.JH655891.1                           17545920 2 -  53390261 AG
i Condylura_cristata.JH655891.1                          I 1 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10432 2 -     20389 AA
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 1 C 0
s Crocidura_indochinensis.CroInd_scaffold_603213              1025 2 +      1923 TG
i Crocidura_indochinensis.CroInd_scaffold_603213         T 3 I 98
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24173 2 -     87169 AC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 1 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2784 2 +      5455 GC
i Cuniculus_paca.CunPac_flattened_line_231100            I 1 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1167 2 +      3576 GG
i Dasyprocta_punctata.DasPun_flattened_line_206793       I 1 C 0
s Dasypus_novemcinctus.JH564415.1                            61004 2 +   2246927 GA
i Dasypus_novemcinctus.JH564415.1                        I 1 C 0
s Daubentonia_madagascariensis.ctg71                      12532828 2 -  12879189 GG
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811115 2 +  35494412 AG
i Delphinapterus_leucas.KZ290073.1                       I 1 C 0
s Desmodus_rotundus.KZ672289.1                             8627844 2 +  20541912 AG
i Desmodus_rotundus.KZ672289.1                           I 1 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669344 2 +   1390856 AG
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 1 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2419 2 +    198055 AG
i Diceros_bicornis.DicBicMic_scaffold_5955               I 1 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34210 2 +     67921 GG
i Dinomys_branickii.DinBra_scaffold_21862                T 77 C 0
s Dipodomys_ordii.KN672350.1                              18895740 2 +  37912305 GG
i Dipodomys_ordii.KN672350.1                             I 1 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  11950 2 +     14536 GG
i Dipodomys_stephensi.DipSte_scaffold_75855              I 1 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31424 2 -     42551 GG
i Dolichotis_patagonum.DolPat_scaffold_30833             I 1 C 0
s Eidolon_helvum.KE759718.1                                   7351 2 +     11740 AG
i Eidolon_helvum.KE759718.1                              I 1 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310216 2 +    607251 AG
i Elaphurus_davidianus.JRFZ01104969.1                    I 1 C 0
s Elephantulus_edwardii.JH947257.1                         1088939 2 +  10337057 GA
i Elephantulus_edwardii.JH947257.1                       I 1 C 0
s Enhydra_lutris.KZ291758.1                               16325705 2 -  41312741 AC
i Enhydra_lutris.KZ291758.1                              I 1 C 0
s Eptesicus_fuscus.JH977646.1                              2144001 2 -  14770903 AG
i Eptesicus_fuscus.JH977646.1                            I 1 C 0
s Equus_asinus.JREZ01000139.1                              1279686 2 +   4378816 AG
i Equus_asinus.JREZ01000139.1                            I 1 C 0
s Equus_caballus.CM000403.2                               18527507 2 -  39960074 AG
i Equus_caballus.CM000403.2                              I 1 C 0
s Equus_przewalskii.KK951119.1                               29522 2 +    498745 AG
i Equus_przewalskii.KK951119.1                           I 1 C 0
s Erinaceus_europaeus.JH835339.1                           3325276 2 -   7059049 AG
i Erinaceus_europaeus.JH835339.1                         T 79 C 0
s Erythrocebus_patas.Contig38                             21199865 2 -  21539334 TG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10791 2 +    133382 AG
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 1 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24728 2 -     44125 AG
i Eubalaena_japonica.EubJap_flattened_line_31514         I 1 C 0
s Felis_catus.AANG03299807.1                                   350 2 -       507 AC
i Felis_catus.AANG03299807.1                             I 1 C 0
s Felis_catus_fca126.CM031415.1                           20191928 2 + 205367284 AC
i Felis_catus_fca126.CM031415.1                          I 1 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  5453 2 -     36744 AC
i Felis_nigripes.FelNig_flattened_line_20823             I 1 C 0
s Fukomys_damarensis.KN121974.1                             848434 2 +   3816255 GA
i Fukomys_damarensis.KN121974.1                          I 1 C 0
s Galagoides_demidoff.k141_31856                              3131 2 -      3432 aa
i Galagoides_demidoff.k141_31856                         T 81 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25398 2 +     26054 GG
i Galeopterus_variegatus.GalVar_scaffold_56069           I 1 C 0
s Glis_glis.GliGli_scaffold_19807                            30289 2 +     49224 GC
i Glis_glis.GliGli_scaffold_19807                        I 1 C 0
s Gorilla_beringei.k141_3596273                              10354 2 -     32273 TG
i Gorilla_beringei.k141_3596273                          T 140 C 0
s Gorilla_gorilla.LT578341.1                             186332504 2 + 186649187 TG
i Gorilla_gorilla.LT578341.1                             T 140 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   30017 2 +     78134 AC
i Graphiurus_murinus.GraMur_scaffold_10447               I 1 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238090 2 +    327341 AC
i Helogale_parvula.HelPar_flattened_line_2585            I 1 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17416 2 +     36099 AG
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 1 C 0
s Heterocephalus_glaber.JH602082.1                        20659313 2 +  22651954 GA
i Heterocephalus_glaber.JH602082.1                       I 1 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 176 2 +       961 GG
i Heterohyrax_brucei.HetBruBak_scaffold_383740           I 1 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111971 2 +    128679 AG
i Hippopotamus_amphibius.HipAmp_scaffold_9076            I 1 C 0
s Hipposideros_armiger.JXIK01000431.1                       108310 2 +   1711038 AG
i Hipposideros_armiger.JXIK01000431.1                    I 1 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39751 2 +     43066 AG
i Hipposideros_galeritus.HipGal_scaffold_29171           I 1 C 0
s Hoolock_leuconedys.ctg274                                    429193 2 +    630532 TG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40555 2 +     55795 AC
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 1 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19782 2 -    143317 GG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 1 C 0
s Hylobates_agilis.k141_307679                               12111 2 -     15490 TG
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              54116 2 +     67168 TG
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189537769 2 - 191637585 TG
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3330661 2 -  11177569 TG
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80856 2 +    135385 GG
i Hystrix_cristata.HysCri_scaffold_5660                  I 1 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514523 2 -   7955117 GG
i Ictidomys_tridecemlineatus.JH393364.1                  I 1 C 0
s Indri_indri.k141_3655594                                   18100 2 +     31101 GG
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22332 2 +     23964 AG
i Inia_geoffrensis.IniGeo_flattened_line_48101           I 1 C 0
s Jaculus_jaculus.JH725527.1                               8271303 2 -   9596543 AG
i Jaculus_jaculus.JH725527.1                             I 5 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1599 2 -      3359 AG
i Kogia_breviceps.KogBre_flattened_line_192630           I 1 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    12175 2 -     42476 AG
i Lasiurus_borealis.LasBor_scaffold_32767                T 85 C 0
s Lepilemur_ankaranensis.k141_596936                          6734 2 -     23766 GG
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24681 2 +     45836 GG
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31592 2 -     32627 GG
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      22736 2 +     54090 GG
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3036038 2 +   3914936 AC
i Leptonychotes_weddellii.KB714746.1                     I 1 C 0
s Lipotes_vexillifer.KE559953.1                             267413 2 -    662738 AG
i Lipotes_vexillifer.KE559953.1                          I 1 C 0
s Lophocebus_aterrimus.ctg367                              1431390 2 +   1826925 TG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             633 2 +     11245 AA
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999468 2 +   6120653 AA
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214449 2 -  43346337 GG
i Loxodonta_africana.GL010049.1                          I 1 C 0
s Lycaon_pictus.CM007581.1                                17951655 2 -  59628241 GC
i Lycaon_pictus.CM007581.1                               I 1 C 0
s Macaca_arctoides.k141_2326796                               1575 2 +     40492 TG
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670835 2 +  60120075 TG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7333 2 -     26193 TG
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75127 2 -    114318 TG
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   846 2 -     23192 TG
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10299 2 -     29190 TG
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18866 2 +     37952 TG
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833954 2 + 187317192 TG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452515 2 -  25927173 TG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74715 2 +     89720 TG
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1712 2 +     20474 TG
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1513 2 -     14993 TG
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324386 2 -    668171 TG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15655 2 -     15935 TG
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20452 2 -     45290 TG
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87498 2 +     94391 AG
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 1 C 0
s Mandrillus_leucophaeus.scaffold280                      23932007 2 -  24302211 TG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346185 2 +    752769 TG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15543 2 +    737560 AG
i Manis_javanica.JSZB01003497.1                          I 1 C 0
s Manis_pentadactyla.KN006162.1                              46932 2 -    317179 AG
i Manis_pentadactyla.KN006162.1                          I 1 C 0
s Marmota_marmota.CZRN01000018.1                          33097373 2 -  40650429 GG
i Marmota_marmota.CZRN01000018.1                         I 1 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6730 1 -    207569 A-
i Megaderma_lyra.MegLyr_scaffold_4542                    I 1 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6169 2 +     13704 AC
i Mellivora_capensis.MelCap_flattened_line_69365         I 1 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3000 2 +     10310 AG
i Mesoplodon_bidens.MesBid_scaffold_108144               I 1 C 0
s Microcebus_murinus.CM007674.1                           18283260 2 -  93316391 GG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13355 2 -     19307 AG
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 1 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849029 2 +   8254450 AG
i Miniopterus_natalensis.LDJU01000034.1                  I 1 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32905 2 +     64694 AG
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 1 C 0
s Miopithecus_ogouensis.k141_534055                           3742 2 -     28506 TG
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62368 2 -     63350 AC
i Mirounga_angustirostris.MirAng_flattened_line_22144    I 1 C 0
s Mirza_zaza.k141_952172                                      4615 2 -     37649 GG
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26505 2 -    437263 AG
i Monodon_monoceros.MonMon_M_scaffold_103                I 1 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137761 2 -    366855 AG
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 1 C 0
s Moschus_moschiferus.MosMos_scaffold_61429                  27356 2 -     27816 AG
i Moschus_moschiferus.MosMos_scaffold_61429              I 1 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31291 2 +     37127 AC
i Mungos_mungo.MunMun_flattened_line_23663               I 1 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2282 2 +     14296 GT
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 1 C 0
s Mustela_putorius.JH418006.1                               297600 2 -  14710649 AC
i Mustela_putorius.JH418006.1                            I 1 C 0
s Myotis_brandtii.KE162005.1                                278236 2 -  10118263 AG
i Myotis_brandtii.KE162005.1                             I 1 C 0
s Myotis_davidii.KB100139.1                                1585793 2 -   6019432 AG
i Myotis_davidii.KB100139.1                              I 1 C 0
s Myotis_lucifugus.GL429869.1                              3902002 2 -   4330536 AG
i Myotis_lucifugus.GL429869.1                            I 1 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32561 2 +     33610 AG
i Myotis_myotis.MyoMyo_scaffold_28916                    I 1 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186042 2 +    196477 GA
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 1 C 0
s Nasalis_larvatus.k141_413338                                9755 2 +     21681 TG
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865461 2 +   7148211 AG
i Neophocaena_asiaeorientalis.KZ687982.1                 I 1 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756326 1 +    783361 -G
i Noctilio_leporinus.NocLep_scaffold_251                 I 1 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145916 2 -   9404916 GC
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 1 C 0
s Nycticebus_bengalensis.LG01                            102574437 2 - 196305487 AA
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2123 2 +      8486 AA
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744864 2 + 199412804 AA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355697 2 +   3988456 GG
i Ochotona_princeps.JH802162.1                           I 1 C 0
s Odobenus_rosmarus.KB229312.1                              500657 2 -   2017862 AC
i Odobenus_rosmarus.KB229312.1                           I 1 C 0
s Odocoileus_virginianus.KZ100018.1                         144589 2 +    630418 AT
i Odocoileus_virginianus.KZ100018.1                      I 1 C 0
s Orcinus_orca.KB316932.1                                  2781376 2 -  10937097 AG
i Orcinus_orca.KB316932.1                                I 1 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6774 2 -     18566 GA
i Orycteropus_afer.OryAfe_flattened_line_144387          I 1 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458670 2 -    559221 GC
i Otocyon_megalotis.JAEUCK010005147.1                    I 1 C 0
s Ovis_aries.CM001607.2                                   17584947 2 +  44047080 AG
i Ovis_aries.CM001607.2                                  I 1 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173368 2 -    191736 AG
i Ovis_canadensis.OviCan_scaffold_2572                   I 1 C 0
s Pan_paniscus.KQ411613.1                                    38543 2 +     80009 tg
i Pan_paniscus.KQ411613.1                                I 2405 C 0
s Pan_troglodytes.CM009242.2                             189137298 2 + 189151597 tg
i Pan_troglodytes.CM009242.2                             I 208 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  147075 2 +    230217 AC
i Panthera_onca.PanOnc_flattened_line_3271               I 1 C 0
s Panthera_pardus.KV860321.1                                259784 2 +  18783137 AC
i Panthera_pardus.KV860321.1                             I 1 C 0
s Panthera_tigris.KE722367.1                               4716931 2 -   8748460 AC
i Panthera_tigris.KE722367.1                             I 1 C 0
s Pantholops_hodgsonii.KE114653.1                          1264301 2 -   2937107 AG
i Pantholops_hodgsonii.KE114653.1                        I 1 C 0
s Papio_anubis.CM001495.2                                183437329 2 + 183742232 TG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1394 2 +     20448 TG
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20558013 2 +  20919399 TG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                    137 2 +     41871 TG
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_ursinus.k141_3428135                                  3415 2 +      9205 TG
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8810 2 -     78924 AC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 1 C 0
s Perodicticus_ibeanus.k141_855320                            4614 2 +     13100 AA
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             2982 2 +     25941 AA
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25297 2 +     32600 GG
i Perognathus_longimembris.PerPac_flattened_line_34437   I 1 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25782 2 -     29689 GA
i Petromus_typicus.PetTyp_scaffold_42190                 I 1 I 3
s Phocoena_phocoena.PhoPho_flattened_line_24159               8423 2 +     63832 AG
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 1 C 0
s Piliocolobus_badius.k141_1234363                           38271 2 +     62158 TG
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        32998 2 +     89929 TG
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34414 2 +     51399 TG
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290635 2 -  14605196 TG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              375 2 +     22620 AG
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 1 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34129 2 +     35617 AG
i Platanista_gangetica.PlaMin_flattened_line_32310       I 1 C 0
s Pongo_abelii.CM009266.2                                189125485 2 + 189387572 TG
i Pongo_abelii.CM009266.2                                I 309 C 0
s Pongo_pygmaeus.ctg66                                     9565089 2 +   9816681 TG
i Pongo_pygmaeus.ctg66                                   I 70 C 0
s Presbytis_comata.k141_677006                               67915 2 -     81375 TG
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9742 2 +     10147 TG
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9937 2 -     22811 GG
i Procavia_capensis.ProCapCap_scaffold_85530             I 1 C 0
s Propithecus_coquerelli.NW_012148875.1                     986314 2 +   2598838 GG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          24603 2 +     38485 GG
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                              764 2 +      4256 GG
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22122 2 +     35766 GG
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            305 2 -     24134 GG
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24117 2 -     67325 GG
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            362 2 -      6182 GG
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11143 2 -     21811 AG
i Pteronotus_parnellii.KE909381.1                        I 1 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36611 2 +     42204 AC
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 1 C 0
s Pteropus_alecto.KB030862.1                              22973621 2 +  28871421 AG
i Pteropus_alecto.KB030862.1                             I 1 I 3
s Pteropus_vampyrus.KN534172.1                                1558 2 -      8028 AG
i Pteropus_vampyrus.KN534172.1                           I 1 I 3
s Puma_concolor.QAVW01001104.1                            20270242 2 -  38429054 AC
i Puma_concolor.QAVW01001104.1                           I 1 C 0
s Pygathrix_cinerea.k141_1153803                              9744 2 -     91421 TG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603878 2 +   7812017 TG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9717 2 -     72585 TG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4837 2 +     55207 AT
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 1 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        366854 2 -   3329780 AG
i Rhinolophus_sinicus.LVEH01000134.1                     I 1 C 0
s Rhinopithecus_bieti.k119_217274                             1130 2 -     11128 TG
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230507 2 - 195417433 TG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7666215 2 +   7961872 TG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84606 2 -     96226 AA
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 1 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3490 1 +      4321 A-
i Saiga_tatarica.SaiTat_scaffold_373180                  I 1 C 0
s Semnopithecus_entellus.k141_11662                          14259 2 -     19888 TG
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21464 2 +     39453 TG
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            1988 2 +     27826 TG
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1510 2 -     19483 TG
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1572 2 +      7198 TG
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9832 2 +     15514 TG
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187626 2 -    191337 AG
i Solenodon_paradoxus.SolPar_flattened_line_5840         I 1 C 0
s Sorex_araneus.JH798187.1                                13646972 2 -  18376816 TG
i Sorex_araneus.JH798187.1                               T 64 C 0
s Spermophilus_dauricus.KZ294078.1                         1948165 2 -   3870691 GG
i Spermophilus_dauricus.KZ294078.1                       I 1 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27153 2 +     97271 AA
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14160 2 -    196729 AC
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 C 0
s Sus_scrofa.CM000828.4                                   62882408 2 -  69701581 AA
i Sus_scrofa.CM000828.4                                  I 1 C 0
s Symphalangus_syndactylus.tarseq_199                      1087808 2 -   1523678 TG
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6759 2 +     41958 AG
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 1 I 3
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69404 2 +    116680 GA
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 1 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115141 2 -    156842 AG
i Tapirus_indicus.TapInd_scaffold_9301                   I 1 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383596 2 +    539355 AG
i Tapirus_terrestris.TapTer_scaffold_755                 I 1 C 0
s Tarsius_lariang.k141_2201908                               10589 2 +     70052 GG
i Tarsius_lariang.k141_2201908                           C 0 I 1
s Tarsius_wallacei.k141_780063                               14894 2 +     25099 GG
i Tarsius_wallacei.k141_780063                           C 0 I 1
s Theropithecus_gelada.CM009954.1                        186422838 2 + 186847797 TG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103123 2 +    114563 GG
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 1 I 3
s Tonatia_saurophila.TonSau_scaffold_294                     78899 2 +    610378 AG
i Tonatia_saurophila.TonSau_scaffold_294                 I 1 C 0
s Trachypithecus_auratus.k141_722599                          5569 2 -     20410 TG
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9761 2 +     15221 TG
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5669 2 +     19930 TG
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2096 2 -     19997 TG
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42215 2 -     60166 TG
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9687 2 -     27529 TG
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9627 2 -     18194 TG
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3363 2 -     21137 TG
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2065 2 -     10723 TG
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1218 2 +      9834 TG
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19536 2 +     32220 TG
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933633 2 +   6242583 TG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2878 2 +     20839 TG
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    615 2 -      1748 AG
i Tragulus_javanicus.TraJav_scaffold_140459              T 71 C 0
s Tupaia_chinensis.KB320699.1                              2149526 2 +   4065304 GG
i Tupaia_chinensis.KB320699.1                            I 1 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     3145 2 -     10553 GG
i Tupaia_tana.TupTan_flattened_line_97126                I 1 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737623 2 +  33153633 AG
i Tursiops_truncatus.MRVK01000835.1                      I 1 C 0
s Uropsilus_gracilis.UroGra_scaffold_97021                    1854 2 -      4736 AG
i Uropsilus_gracilis.UroGra_scaffold_97021               I 1 C 0
s Ursus_maritimus.KK499267.1                               4846854 2 -   5085361 AC
i Ursus_maritimus.KK499267.1                             I 1 C 0
s Vicugna_pacos.KN270157.1                                 5368327 2 -   5488506 AG
i Vicugna_pacos.KN270157.1                               I 1 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7331 2 -     43706 GC
i Vulpes_lagopus.VulLag_flattened_line_30954             I 1 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19660 2 -     24430 GG
i Xerus_inauris.XerIna_scaffold_48378                    I 1 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1779 2 +      2932 AC
i Zalophus_californianus.ZalCal_flattened_line_63728     I 1 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9937 2 +     63895 GC
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 5 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11315 2 +     12536 AG
i Ziphius_cavirostris.ZipCav_flattened_line_71469        I 1 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Varecia_variegata.k141_1128296                              7155 0 +     24756 C
e Varecia_rubra.k141_590885                                   7107 0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   1874 68 +      8208 T
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    151381 45 -    313613 T
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414 0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Papio_papio.k141_802527                                     3591 59 +     27711 T
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.KL204047.1                            2025524 76 -   3037898 T
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5135 74 +     14753 T
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    15418 9 -    145209 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Lemur_catta.scaffold_24                                 15519761 0 -  30322482 C
e Hapalemur_occidentalis.k141_907772                          9234 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402 0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298 0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517 0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                               9432 0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267 0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247 0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321 0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369 0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369 0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184 0 -     25546 C
e Eulemur_collaris.k141_377015                                2154 0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453 0 -     14127 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            4816 68 -      6351 T
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1264 1 +     62944 C
s Allenopithecus_nigroviridis.k141_3361533                    9251 1 -     52922 C
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9178 1 -     28001 C
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9304 1 -      9772 C
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            461 1 -     12518 C
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470222 1 +   4669795 C
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8771 1 -     19203 C
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3190 1 +      8260 C
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3420 1 +     27781 C
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3566 1 -     20310 C
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6550 1 +     29689 C
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             903 1 +      9989 C
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9238 1 -     27936 C
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9257 1 -     11289 C
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811633 1 +  39242232 C
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217324 1 -  21565898 C
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34444 1 -     53127 C
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1736 1 +      7159 C
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9249 1 -     27947 C
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9225 1 +     17596 C
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39719 1 -     41420 C
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chlorocebus_aethiops.ctg25                              18423188 1 -  18827391 C
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9631 1 -     50209 C
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416636 1 + 135778131 C
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1905165 1 +   2368649 C
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944810 1 + 200372422 C
i Colobus_guereza.LG01                                   I 27 C 0
s Colobus_polykomos.k141_906115                              31704 1 +     84244 C
i Colobus_polykomos.k141_906115                          I 27 C 0
s Erythrocebus_patas.Contig38                             21199867 1 -  21539334 C
i Erythrocebus_patas.Contig38                            C 0 C 0
s Gorilla_beringei.k141_3596273                              10356 1 -     32273 C
i Gorilla_beringei.k141_3596273                          C 0 I 3
s Gorilla_gorilla.LT578341.1                             186332506 1 + 186649187 C
i Gorilla_gorilla.LT578341.1                             C 0 I 13
s Hoolock_leuconedys.ctg274                                    429195 1 +    630532 C
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_307679                               12113 1 -     15490 C
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              54118 1 +     67168 C
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189537771 1 - 191637585 C
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3330663 1 -  11177569 C
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1431392 1 +   1826925 C
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                               1577 1 +     40492 C
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670837 1 +  60120075 C
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7335 1 -     26193 C
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75129 1 -    114318 C
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   848 1 -     23192 C
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10301 1 -     29190 C
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18868 1 +     37952 C
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833956 1 + 187317192 C
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452517 1 -  25927173 C
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74717 1 +     89720 C
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1714 1 +     20474 C
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1515 1 -     14993 C
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324388 1 -    668171 C
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15657 1 -     15935 C
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20454 1 -     45290 C
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23932009 1 -  24302211 C
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346187 1 +    752769 C
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3744 1 -     28506 C
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Nasalis_larvatus.k141_413338                                9757 1 +     21681 T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Pan_paniscus.KQ411613.1                                    38545 1 +     80009 c
i Pan_paniscus.KQ411613.1                                C 0 T 2402
s Pan_troglodytes.CM009242.2                             189137300 1 + 189151597 c
i Pan_troglodytes.CM009242.2                             C 0 n 0
s Papio_anubis.CM001495.2                                183437331 1 + 183742232 C
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1396 1 +     20448 C
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20558015 1 +  20919399 C
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                    139 1 +     41871 C
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_ursinus.k141_3428135                                  3417 1 +      9205 C
i Papio_ursinus.k141_3428135                             C 0 C 0
s Piliocolobus_badius.k141_1234363                           38273 1 +     62158 C
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33000 1 +     89929 C
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34416 1 +     51399 C
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290637 1 -  14605196 C
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189125487 1 + 189387572 C
i Pongo_abelii.CM009266.2                                C 0 T 70
s Pongo_pygmaeus.ctg66                                     9565091 1 +   9816681 C
i Pongo_pygmaeus.ctg66                                   C 0 I 204
s Presbytis_comata.k141_677006                               67917 1 -     81375 T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9744 1 +     10147 T
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Pygathrix_cinerea.k141_1153803                              9746 1 -     91421 T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603880 1 +   7812017 T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9719 1 -     72585 T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             1132 1 -     11128 T
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230509 1 - 195417433 T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7666217 1 +   7961872 T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Semnopithecus_entellus.k141_11662                          14261 1 -     19888 T
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21466 1 +     39453 T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            1990 1 +     27826 T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1512 1 -     19483 T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1574 1 +      7198 T
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9834 1 +     15514 T
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1087810 1 -   1523678 C
i Symphalangus_syndactylus.tarseq_199                    C 0 I 207
s Theropithecus_gelada.CM009954.1                        186422840 1 + 186847797 C
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          5571 1 -     20410 T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9763 1 +     15221 T
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5671 1 +     19930 T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2098 1 -     19997 T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42217 1 -     60166 T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9689 1 -     27529 T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9629 1 -     18194 T
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3365 1 -     21137 T
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2067 1 -     10723 T
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1220 1 +      9834 T
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19538 1 +     32220 T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933635 1 +   6242583 T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2880 1 +     20839 T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Loris_tardigradus.ctg83                                   999470 0 +   6120653 C
e Loris_lydekkerianus.k141_2539221                             635 0 +     11245 C
e Perodicticus_potto.k141_1092580                             2984 0 +     25941 C
e Perodicticus_ibeanus.k141_855320                            4616 0 +     13100 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            11317 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                       9939 0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_63728          1781 0 +      2932 C
e Xerus_inauris.XerIna_scaffold_48378                        19662 0 -     24430 C
e Vulpes_lagopus.VulLag_flattened_line_30954                  7333 0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5368329 0 -   5488506 C
e Varecia_variegata.k141_1128296                              7155 0 +     24756 C
e Varecia_rubra.k141_590885                                   7107 0 +     50397 C
e Ursus_maritimus.KK499267.1                               4846856 0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_97021                    1856 0 -      4736 C
e Tursiops_truncatus.MRVK01000835.1                       15737625 0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     3147 0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2149528 0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                    617 0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     78901 0 +    610378 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   1874 68 +      8208 T
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103125 3 +    114563 I
e Tarsius_wallacei.k141_780063                               14896 1 +     25099 I
e Tarsius_lariang.k141_2201908                               10591 1 +     70052 I
e Tapirus_terrestris.TapTer_scaffold_755                    383598 0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      115143 0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 69406 0 +    116680 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                 6761 3 +     41958 I
e Sus_scrofa.CM000828.4                                   62882410 0 -  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629              14162 0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             27155 0 +     97271 C
e Spermophilus_dauricus.KZ294078.1                         1948167 0 -   3870691 C
e Sorex_araneus.JH798187.1                                13646974 0 -  18376816 C
e Solenodon_paradoxus.SolPar_flattened_line_5840            187628 0 -    191337 C
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    151381 45 -    313613 T
e Saiga_tatarica.SaiTat_scaffold_373180                       3491 0 +      4321 C
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                84608 0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        366856 0 -   3329780 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4839 0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20270244 0 -  38429054 C
e Pteropus_vampyrus.KN534172.1                                1560 3 -      8028 I
e Pteropus_alecto.KB030862.1                              22973623 3 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         36613 0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            11145 0 -     21811 C
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Propithecus_verreauxi.k141_956661                            364 0 -      6182 C
e Propithecus_tattersalli.k141_790011                        24119 0 -     67325 C
e Propithecus_perrieri.k141_1200571                            307 0 -     24134 C
e Propithecus_edwardsi.k141_1176054                          22124 0 +     35766 C
e Propithecus_diadema.k141_357118                              766 0 +      4256 C
e Propithecus_coronatus.k141_347390                          24605 0 +     38485 C
e Propithecus_coquerelli.NW_012148875.1                     986316 0 +   2598838 C
e Prolemur_simus.MPIZ01000396.1                            2592414 0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                  9939 0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           34131 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              377 0 +     22620 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               8425 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     25784 3 -     29689 I
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25299 0 +     32600 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8812 0 -     78924 C
e Papio_papio.k141_802527                                     3591 59 +     27711 T
e Pantholops_hodgsonii.KE114653.1                          1264303 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4716933 0 -   8748460 C
e Panthera_pardus.KV860321.1                                259786 0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  147077 0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      173370 0 -    191736 C
e Ovis_aries.CM001607.2                                   17584949 0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       458672 0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               6776 0 -     18566 C
e Orcinus_orca.KB316932.1                                  2781378 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144591 0 +    630418 C
e Odobenus_rosmarus.KB229312.1                              500659 0 -   2017862 C
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1355699 0 +   3988456 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744866 0 + 199412804 C
e Nycticebus_coucang.k141_5327727                             2125 0 +      8486 C
e Nycticebus_bengalensis.LG01                            102574439 0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9145918 0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    756327 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5865463 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.KL204047.1                            2025524 76 -   3037898 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186044 0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        32563 0 +     33610 C
e Myotis_lucifugus.GL429869.1                              3902004 0 -   4330536 C
e Myotis_davidii.KB100139.1                                1585795 0 -   6019432 C
e Myotis_brandtii.KE162005.1                                278238 0 -  10118263 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               297602 0 -  14710649 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              2284 0 +     14296 C
e Murina_feae.MurFea_scaffold_85699                           5135 74 +     14753 T
e Mungos_mungo.MunMun_flattened_line_23663                   31293 0 +     37127 C
e Moschus_moschiferus.MosMos_scaffold_61429                  27358 0 -     27816 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 137763 0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    26507 0 -    437263 C
e Mirza_zaza.k141_952172                                      4617 0 -     37649 C
e Mirounga_angustirostris.MirAng_flattened_line_22144        62370 0 -     63350 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             32907 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849031 0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                13357 0 -     19307 C
e Microgale_talazaci.MicTal_scaffold_6613                    15418 9 -    145209 I
e Microcebus_murinus.CM007674.1                           18283262 0 -  93316391 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3002 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365              6171 0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                         6731 0 -    207569 C
e Marmota_marmota.CZRN01000018.1                          33097375 0 -  40650429 C
e Manis_pentadactyla.KN006162.1                              46934 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              15545 0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 87500 0 +     94391 C
e Lycaon_pictus.CM007581.1                                17951657 0 -  59628241 C
e Loxodonta_africana.GL010049.1                            4214451 0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             267415 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3036040 0 +   3914936 C
e Lepilemur_septentrionalis.k141_185316                      22738 0 +     54090 C
e Lepilemur_ruficaudatus.k141_420445                         31594 0 -     32627 C
e Lepilemur_dorsalis.k141_577674                             24683 0 +     45836 C
e Lepilemur_ankaranensis.k141_596936                          6736 0 -     23766 C
e Lemur_catta.scaffold_24                                 15519761 0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12177 0 -     42476 C
e Kogia_breviceps.KogBre_flattened_line_192630                1601 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8271305 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               22334 0 +     23964 C
e Indri_indri.k141_3655594                                   18102 0 +     31101 C
e Ictidomys_tridecemlineatus.JH393364.1                    7514525 0 -   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                      80858 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19784 0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  40557 0 +     55795 C
e Hipposideros_galeritus.HipGal_scaffold_29171               39753 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       108312 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               111973 0 +    128679 C
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 178 0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20659315 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17418 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               238092 0 +    327341 C
e Hapalemur_occidentalis.k141_907772                          9234 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402 0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298 0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517 0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   30019 0 +     78134 C
e Glis_glis.GliGli_scaffold_19807                            30291 0 +     49224 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_56069               25400 0 +     26054 C
e Galagoides_demidoff.k141_31856                              3133 0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848436 0 +   3816255 C
e Felis_nigripes.FelNig_flattened_line_20823                  5455 0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20191930 0 + 205367284 C
e Eulemur_sanfordi.k141_1122526                               9432 0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267 0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247 0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321 0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369 0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369 0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184 0 -     25546 C
e Eulemur_collaris.k141_377015                                2154 0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453 0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             24730 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           10793 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3325278 0 -   7059049 C
e Equus_przewalskii.KK951119.1                               29524 0 +    498745 C
e Equus_caballus.CM000403.2                               18527509 0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1279688 0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2144003 0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16325707 0 -  41312741 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1088941 0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       310218 0 +    607251 C
e Eidolon_helvum.KE759718.1                                   7353 0 +     11740 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 31426 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  11952 0 +     14536 C
e Dipodomys_ordii.KN672350.1                              18895742 0 +  37912305 C
e Dinomys_branickii.DinBra_scaffold_21862                    34212 0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    2421 0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  669346 0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8627846 0 +  20541912 C
e Delphinapterus_leucas.KZ290073.1                        16811117 0 +  35494412 C
e Daubentonia_madagascariensis.ctg71                      12532830 0 -  12879189 C
e Dasypus_novemcinctus.JH564415.1                            61006 0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1169 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 2786 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             24175 0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_603213              1027 98 +      1923 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          10434 0 -     20389 C
e Condylura_cristata.JH655891.1                           17545922 0 -  53390261 C
e Choloepus_hoffmanni.KN194906.1                            170192 0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15093 0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1248434 0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           12013 0 +     57038 C
e Cheirogaleus_major.k141_333249                             16664 0 -     52598 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            4816 68 -      6351 T
e Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2531 0 -      3715 C
e Cephalopachus_bancanus.k141_2037105                         4892 1 -      8605 I
e Cavia_tschudii.CavTsc_scaffold_8919                        98537 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18359662 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18347402 0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     89147 0 +    217609 C
e Castor_canadensis.CasCan_scaffold_2074                    133583 0 +    179628 C
e Carollia_perspicillata.CarPer_scaffold_92756                2815 0 -     11696 C
e Carlito_syrichta.NW_007259797.1                           140976 1 -    496798 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18059934 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18829214 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18496718 0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17955417 0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9031153 0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    181766 0 -    185531 C
e CanFam4.chr16                                           17795709 0 -  60362399 C
e Camelus_ferus.KB017975.1                                  399580 0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2331304 0 -   7040546 C
e Camelus_bactrianus.KN276810.1                            9998840 0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2818389 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18082900 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1124822 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20272262 0 +  48749331 C
e Bison_bison.KN261452.1                                    199057 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    26018 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         1947 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15191481 0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              49870 0 +     85213 C
e Avahi_laniger.k141_765380                                  49245 0 -     92717 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  2397 0 +     43469 C
e Arctocebus_calabarensis.k141_288239                        14383 0 +     17124 C
e Aplodontia_rufa.AprRuf_scaffold_68852                       7205 0 +     20879 C
e Antilocapra_americana.AntAmePen_scaffold_12469             97548 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183045 0 +    412891 C
e Ammotragus_lervia.NIVO01071767.1                          675096 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     64925 0 -     89534 C
e Ailurus_fulgens.LNAC01001112.1                             75145 0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9506922 3 -  29979442 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           823230 0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       1265 13 +     62944 T---------------------------A-T-A-TT---AGAG-GA-A
s Acinonyx_jubatus.LLWD01001279.1                           823230 14 -   1699592 T---------------------------A-CAA-TT---GTAA-GA-A
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506925 10 -  29979442 --------------------------------G-TT---AGAG-GA-A
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 3 C 0
s Ailurus_fulgens.LNAC01001112.1                             75145 14 -    347723 T---------------------------A-CAA-TT---AGAG-GA-T
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64925 13 -     89534 A---------------------------A-T-A-TT---AGAG-GA-A
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9252 13 -     52922 T---------------------------A-T-G-TT---AGAG-GA-A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9179 13 -     28001 T---------------------------A-T-G-TT---AGAG-GA-A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9305 13 -      9772 T---------------------------A-T-G-TT---AGAG-GA-A
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            462 13 -     12518 T---------------------------A-T-G-TT---AGAG-GA-A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675096 13 -   2318259 T---------------------------T-C-A-TT---AGGG-GA-A
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183045 13 +    412891 T---------------------------A-C-T-CC---AGGG-GA-A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97548 13 -    100397 C---------------------------T-C-A-TT---AGAG-GA-A
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7205 13 +     20879 A---------------------------A-C-A-TG---AAAG-AA-A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14383 13 +     17124 T---------------------------C-A-G-TA---AGAG-GA-A
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2397 13 +     43469 T---------------------------G-C-A-TT---AGGG-GA-A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  49245 13 -     92717 T---------------------------A-T-G-TT---AGAG-GA-A
i Avahi_laniger.k141_765380                              C 0 I 2
s Avahi_peyrierasi.k141_1424874                              49870 13 +     85213 T---------------------------A-T-G-TT---AGAG-GA-A
i Avahi_peyrierasi.k141_1424874                          C 0 I 2
s Balaenoptera_acutorostrata.KI537508.1                   15191481 13 +  23207421 T---------------------------A-C-A-TT---AGAG-GA-A
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         1947 13 -     18090 T---------------------------A-C-A-TT---AGAG-GA-A
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26018 13 +     34529 T---------------------------T-C-A-TT---AGGG-GA-A
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    199057 13 -    288883 T---------------------------T-C-A-TT---AGAG-GA-A
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20272262 13 +  48749331 N---------------------------T-C-A-TT---AGAG-GA-A
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1124822 13 -   1948126 T---------------------------T-C-A-TT---AGAG-GA-A
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18082900 13 +  45695690 T---------------------------T-C-A-TT---AGAG-GA-A
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2818389 13 +   4408762 T---------------------------T-C-A-TT---AGAG-GA-A
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998840 13 -  17673402 T---------------------------A-C-G-TT---AGAG-GA-A
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331304 13 -   7040546 T---------------------------A-C-G-TT---AGAG-GA-A
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399580 13 -   1652518 T---------------------------A-C-G-TT---AGAG-GA-A
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795709 14 -  60362399 T---------------------------A-CAA-TT---ATAG-GA-A
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181766 14 -    185531 T---------------------------A-CAA-TT---ATAG-GA-A
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031153 14 -   9314153 T---------------------------A-CAA-TT---ATAG-GA-A
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955417 14 -  59632846 T---------------------------A-CAA-TT---ATAG-GA-A
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496718 14 +  63665305 T---------------------------A-CAA-TT---ATAG-GA-A
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18829214 13 +  46296322 T---------------------------T-C-A-TC---AGGG-GG-A
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18059934 13 -  44709034 T---------------------------T-C-A-TC---AGGG-GG-A
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           140977 13 -    496798 T---------------------------G-T-G-TT---AGAg-aa-a
i Carlito_syrichta.NW_007259797.1                        I 1 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2815 13 -     11696 T---------------------------G-C-A-CT---AGGG-GA-G
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133583 13 +    179628 C---------------------------T-C-A-TC---AGAG-GG-A
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89147 13 +    217609 T---------------------------A-C-A-CT---AGAG-GA-C
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18347402 13 -  23392119 T---------------------------A-C-A-TT---ACAG-GA-A
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18359662 13 -  23407841 T---------------------------A-C-A-TT---ACAG-GA-A
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98537 13 +    143979 T---------------------------A-C-A-TT---ACAG-GA-A
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         4893 13 -      8605 T---------------------------G-T-G-TT---AGAG-AA-A
i Cephalopachus_bancanus.k141_2037105                    I 1 C 0
s Ceratotherium_simum.JH767749.1                          12227813 13 +  27778364 T---------------------------A-C-A-TT---AGAG-GA-A
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2531 13 -      3715 T---------------------------A-C-A-TT---AGAG-GA-A
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470223 13 +   4669795 T---------------------------A-T-G-TT---AGAG-GA-A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8772 13 -     19203 T---------------------------A-T-G-TT---AGAG-GA-A
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3191 13 +      8260 T---------------------------A-T-G-TT---AGAG-GA-A
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3421 13 +     27781 T---------------------------A-T-G-TT---AGAG-GA-A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3567 13 -     20310 T---------------------------A-T-G-TT---AGAG-GA-A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6551 13 +     29689 T---------------------------A-T-G-TT---AGAG-GA-A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             904 13 +      9989 T---------------------------A-T-G-TT---AGAA-GA-A
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9239 13 -     27936 T---------------------------A-T-G-TT---AGAG-GA-A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9258 13 -     11289 T---------------------------A-T-G-TT---AGAG-GA-A
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811634 13 +  39242232 T---------------------------A-T-G-TT---AGAG-GA-A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217325 13 -  21565898 T---------------------------A-T-G-TT---AGAG-GA-A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34445 13 -     53127 T---------------------------A-T-G-TT---AGAG-GA-A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1737 13 +      7159 T---------------------------A-T-G-TT---AGAG-GA-A
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9250 13 -     27947 T---------------------------A-T-G-TT---AGAG-GA-A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9226 13 +     17596 T---------------------------G-G-G-TT---AGAG-GA-A
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39720 13 -     41420 T---------------------------A-T-G-TT---AGAG-GA-A
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Cheirogaleus_major.k141_333249                             16664 13 -     52598 T---------------------------A-T-G-TT---AGAG-GA-A
i Cheirogaleus_major.k141_333249                         C 0 I 2
s Cheirogaleus_medius.k141_1055463                           12013 13 +     57038 T---------------------------A-T-G-TT---AGAG-GA-A
i Cheirogaleus_medius.k141_1055463                       C 0 I 2
s Chinchilla_lanigera.JH722012.1                           1248434 13 +   2543920 T---------------------------A-A-A-AT---ACAG-GA-A
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18423189 13 -  18827391 T---------------------------A-T-G-TT---AGAG-GA-A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9632 13 -     50209 T---------------------------A-T-G-TT---AGAG-GA-A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416637 13 + 135778131 T---------------------------A-T-G-TT---AGAG-GA-A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15093 12 +     19366 T---------------------------G-A-C-TA---AGG--GA-A
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170192 12 +    839153 T---------------------------G-A-C-TA---AGG--GA-A
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1905166 13 +   2368649 T---------------------------G-T-G-TT---AGAG-GA-A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944811 13 + 200372422 T---------------------------G-T-G-TT---AGAG-GA-A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31705 13 +     84244 T---------------------------G-T-G-TT---AGAG-GA-A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545922 13 -  53390261 T---------------------------A-C-A-CT---GGAG-AA-A
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10434 13 -     20389 T---------------------------A-T-G-TT---AGG--GAAA
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_287352               327  5 +      4208 T---------------------------A-G-A-T-------------
i Crocidura_indochinensis.CroInd_scaffold_287352         T 52 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24175 14 -     87169 T---------------------------A-AAA-TT---ATAG-CA-A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2786 13 +      5455 T---------------------------A-C-A-TT---ACAG-GA-A
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1169 13 +      3576 T---------------------------A-C-A-TT---ACAG-GA-A
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            61006 12 +   2246927 T---------------------------G-A-C-TA---AGG--AA-G
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532830 13 -  12879189 T---------------------------A-T-G-TT---AGAG-GA-A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811117 13 +  35494412 T---------------------------A-C-A-TT---AGAG-GA-A
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8627846 13 +  20541912 T---------------------------G-C-A-CT---AGGG-GA-A
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669346 13 +   1390856 T---------------------------A-C-A-TT---AGAG-GA-A
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2421 13 +    198055 T---------------------------A-C-A-TT---AGAG-GA-A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34212 13 +     67921 T---------------------------A-C-A-AT---ACAG-GA-A
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18895742 13 +  37912305 A---------------------------A-C-A-TT---Caaa-ga-a
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  11952 13 +     14536 A---------------------------A-C-A-TT---CAAA-GA-A
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31426 13 -     42551 T---------------------------A-C-A-TT---ACAG-GA-A
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE759718.1                                   7353 13 +     11740 T---------------------------AAT-A-TT---AGG--GA-A
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310218 13 +    607251 T---------------------------T-C-A-TT---AGAG-GA-A
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1088941 13 +  10337057 G---------------------------G-C-C-TA---AAGG-GA-A
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16325707 14 -  41312741 T---------------------------A-CAA-TT---AGAG-GA-A
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144003 13 -  14770903 T---------------------------A-C-A-CT---AGGT-GA-A
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279688 13 +   4378816 T---------------------------A-C-A-TT---AGAG-GA-A
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527509 13 -  39960074 T---------------------------A-C-A-TT---AGAG-GA-A
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29524 13 +    498745 T---------------------------A-C-A-TT---AGAG-GA-A
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3325278 13 -   7059049 T---------------------------A-C-A-TT---AGGG-GA-A
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21199868 13 -  21539334 T---------------------------A-T-G-TT---AGAG-GA-A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10793 13 +    133382 T---------------------------A-C-A-TT---AGAG-GA-A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24730 13 -     44125 T---------------------------A-C-A-TT---AGAG-GA-A
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.AANG03299807.1                                   352 14 -       507 T---------------------------A-CAA-TT---TTAA-GC-A
i Felis_catus.AANG03299807.1                             C 0 C 0
s Felis_catus_fca126.CM031415.1                           20191930 14 + 205367284 T---------------------------A-CAA-TT---TTAA-GC-A
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  5455 14 -     36744 T---------------------------A-CAA-TT---TTAA-GC-A
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             848436 13 +   3816255 T---------------------------A-T-A-TT---AGAG-GA-A
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galagoides_demidoff.k141_31856                              3133 16 -      3432 g---------------------------c-a-g-tcctgagag-ga-a
i Galagoides_demidoff.k141_31856                         C 0 I 7
s Galeopterus_variegatus.GalVar_scaffold_56069               25400 13 +     26054 T---------------------------A-C-A-TT---AGAG-AA-A
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30291 13 +     49224 T---------------------------T-C-A-TT---AAAG-GA-A
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              10360 10 -     32273 --------------------------------G-TT---ACAG-GA-A
i Gorilla_beringei.k141_3596273                          I 3 C 0
s Gorilla_gorilla.CYUI03001814.1                             26552 13 -     31004 t---------------------------a-t-g-tt---acag-ga-a
i Gorilla_gorilla.CYUI03001814.1                         T 455 I 1068
s Graphiurus_murinus.GraMur_scaffold_10447                   30019 13 +     78134 T---------------------------A-C-A-TT---AAAG-GA-A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238092 14 +    327341 T---------------------------A-CAA-TT---ATAG-CA-A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17418 13 +     36099 T---------------------------T-C-A-TC---AGGG-GA-A
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20659315 13 +  22651954 C---------------------------A-C-A-TT---AGAG-GA-A
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 178 13 +       961 T---------------------------G-C-A-TA---AGAG-GA-A
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111973 13 +    128679 T---------------------------A-C-A-TT---AGAG-GA-A
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108312 13 +   1711038 T---------------------------A-C-A-TG---AGG-AGA-A
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39753 13 +     43066 T---------------------------A-C-A-TG---AGG-AGA-A
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    429196 13 +    630532 T---------------------------A-T-G-TT---AGAG-GA-A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40557 14 +     55795 T---------------------------A-TAA-TT---ATAA-CA-A
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19784 13 -    143317 T---------------------------A-C-A-TT---TCAG-GA-A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_307679                               12114 13 -     15490 T---------------------------A-T-G-TT---AGAG-GA-A
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              54119 13 +     67168 T---------------------------A-T-G-TT---AGAG-GA-A
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189537772 13 - 191637585 T---------------------------A-T-G-TT---AGAG-GA-A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3330664 13 -  11177569 T---------------------------A-T-G-TT---AGAG-GA-A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80858 13 +    135385 T---------------------------A-T-A-TT---AGAA-GA-A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514525 13 -   7955117 T---------------------------A-C-A-TT---ATAG-AA-A
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   18102 13 +     31101 T---------------------------A-T-G-TT---AGAG-GA-A
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22334 13 +     23964 G---------------------------A-C-A-TT---AGAG-GA-A
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271305 13 -   9596543 T---------------------------A-C-A-TT---AGAG-AA-A
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1601 13 -      3359 T---------------------------A-C-A-TT---AGAG-GA-A
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    12177 18 -     42476 T----------------------ACAGTA-C-A-CT---AGGT-GA-A
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6736 13 -     23766 T---------------------------G-C-G-TT---AGAG-GA-A
i Lepilemur_ankaranensis.k141_596936                     C 0 I 5
s Lepilemur_dorsalis.k141_577674                             24683 13 +     45836 T---------------------------G-C-G-TT---AGAG-GA-A
i Lepilemur_dorsalis.k141_577674                         C 0 I 5
s Lepilemur_ruficaudatus.k141_420445                         31594 13 -     32627 T---------------------------G-T-G-TT---AGAG-GA-A
i Lepilemur_ruficaudatus.k141_420445                     C 0 I 5
s Lepilemur_septentrionalis.k141_185316                      22738 13 +     54090 T---------------------------G-C-G-TT---AGAG-GA-A
i Lepilemur_septentrionalis.k141_185316                  C 0 I 5
s Leptonychotes_weddellii.KB714746.1                       3036040 14 +   3914936 T---------------------------A-CAA-TT---AGAG-GA-A
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             267415  8 -    662738 T---------------------------A-C-A-TT---AG-------
i Lipotes_vexillifer.KE559953.1                          C 0 I 2
s Lophocebus_aterrimus.ctg367                              1431393 13 +   1826925 T---------------------------A-C-G-TT---AGAG-GA-A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             635 13 +     11245 T---------------------------C-A-G-TC---AGAG-GA-A
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999470 14 +   6120653 T---------------------------C-A-GTTC---AGAG-GA-A
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214451 13 -  43346337 T---------------------------G-C-C-CA---AGTG-GA-A
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951657 14 -  59628241 T---------------------------A-CAA-TT---ATAG-GA-A
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               1578 13 +     40492 C---------------------------A-T-G-TT---AGAG-GA-A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670838 13 +  60120075 T---------------------------A-T-G-TT---AGAG-GA-A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7336 13 -     26193 T---------------------------A-T-G-TT---AGAG-GA-A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75130 13 -    114318 T---------------------------A-T-G-TT---AGAG-GA-A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   849 13 -     23192 T---------------------------A-T-G-TT---AGAG-GA-A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10302 13 -     29190 T---------------------------A-T-G-TT---AGAG-GA-A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18869 13 +     37952 T---------------------------A-T-G-TT---AGAG-GA-A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833957 13 + 187317192 T---------------------------A-T-G-TT---AGAG-GA-A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452518 13 -  25927173 T---------------------------A-T-G-TT---AGAG-GA-A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74718 13 +     89720 T---------------------------A-T-G-TT---AGAG-GA-A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1715 13 +     20474 T---------------------------A-T-G-TT---AGAG-GA-A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1516 13 -     14993 T---------------------------A-T-G-TT---AGAG-GA-A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324389 13 -    668171 T---------------------------A-T-G-TT---AGAG-GA-A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15658 13 -     15935 T---------------------------A-T-G-TT---AGAG-GA-A
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20455 13 -     45290 T---------------------------A-T-G-TT---AGAG-GA-A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87500 12 +     94391 T---------------------------A-T-A-TT---AGG--GA-A
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23932010 13 -  24302211 T---------------------------A-T-G-TT---AGAG-GA-A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346188 13 +    752769 T---------------------------A-T-G-TT---AGAG-GA-A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15545 13 +    737560 T---------------------------A-C-A-TT---AGAG-GG-G
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              46934 13 -    317179 T---------------------------A-C-A-TT---AGAG-GG-G
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097375 13 -  40650429 T---------------------------A-C-a-tt---aaag-aa-a
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6731  8 -    207569 T---------------------------A-C-A-TT---AG-------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 5
s Mellivora_capensis.MelCap_flattened_line_69365              6171 14 +     13704 T---------------------------A-TAA-TT---AGAG-GA-A
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3002 13 +     10310 T---------------------------A-C-G-TT---AGAG-GA-A
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18283262 13 -  93316391 T---------------------------A-C-A-TT---AGAG-GA-A
i Microcebus_murinus.CM007674.1                          C 0 I 5
s Micronycteris_hirsuta.MicHir_scaffold_52381                13357 13 -     19307 T---------------------------G-C-A-CT---AGGG-GA-A
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849031 13 +   8254450 C---------------------------A-C-A-TT---AGGT-GA-A
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32907 13 +     64694 C---------------------------A-C-A-TT---AGGT-GA-A
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3745 13 -     28506 T---------------------------A-T-G-TT---AAAG-GA-A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62370 14 -     63350 T---------------------------A-CAA-TT---AGAG-GA-A
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      4617 13 -     37649 T---------------------------A-T-G-TT---AGAG-GA-A
i Mirza_zaza.k141_952172                                 C 0 I 5
s Monodon_monoceros.MonMon_M_scaffold_103                    26507 13 -    437263 T---------------------------A-C-A-TT---AGAG-GA-A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137763 13 -    366855 G---------------------------A-C-A-CG---AGGC-GA-A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_61429                  27358 13 -     27816 A---------------------------T-C-A-TT---AGAG-GA-A
i Moschus_moschiferus.MosMos_scaffold_61429              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31293 14 +     37127 T---------------------------A-CAA-TT---ATAG-CA-A
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5061  9 +     14753 ----------------------------------CT---AGGT-GA-A
i Murina_feae.MurFea_scaffold_85699                      T 74 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2284 13 +     14296 T---------------------------G-C-A-TT---AAAG-GA-A
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               297602 14 -  14710649 T---------------------------A-CAA-TT---AGAG-GA-A
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                278238  6 -  10118263 T---------------------------A-C-A-CT------------
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585795  6 -   6019432 T---------------------------A-C-A-CT------------
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902004  6 -   4330536 T---------------------------A-C-A-CT------------
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32563  6 +     33610 T---------------------------A-C-A-CT------------
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186044 12 +    196477 T---------------------------G-A-C-TA---AGG--GA-A
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025448 11 -   3037898 ------------------------------C-A-TT---AGAG-GC-A
i Nannospalax_galili.KL204047.1                          T 76 C 0
s Nasalis_larvatus.k141_413338                                9758 13 +     21681 T---------------------------G-T-G-TT---AGAG-GA-A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865463 13 +   7148211 T---------------------------A-C-A-TT---AGAG-GA-A
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s Noctilio_leporinus.NocLep_scaffold_251                    756327 13 +    783361 T---------------------------G-C-A-CT---AGGT-GA-A
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145918 14 -   9404916 T---------------------------A-CAA-TT---ATAG-GA-A
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s Nycticebus_bengalensis.LG01                            102574439 13 - 196305487 T---------------------------C-A-G-TC---AGAG-GA-A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2125 13 +      8486 T---------------------------C-A-G-TC---AGAG-GA-A
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744866 13 + 199412804 T---------------------------C-A-G-TC---AGAG-GA-A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355699 12 +   3988456 T---------------------------G-C-A-TT---TGA--GA-A
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              500659 14 -   2017862 T---------------------------A-CAA-TT---AGAG-GA-A
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         144591 13 +    630418 T---------------------------T-C-A-TT---AGAG-GA-A
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s Orcinus_orca.KB316932.1                                  2781378 13 -  10937097 T---------------------------A-C-A-TT---AGAG-GA-A
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6776 13 -     18566 T---------------------------G-C-T-TG---AGGG-GA-A
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
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s Ovis_aries.CM001607.2                                   17584949 13 +  44047080 T---------------------------T-C-A-TC---AGGG-GA-A
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173370 13 -    191736 T---------------------------T-C-A-TC---AGGG-GA-A
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    36144 10 +     80009 --------------------------------G-TT---AGAG-GA-A
i Pan_paniscus.KQ411613.1                                T 2402 I 2405
s Pan_troglodytes.CM009242.2                             187570773 13 + 189151597 t---------------------------a-t-g-tt---agag-ga-a
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s Panthera_onca.PanOnc_flattened_line_3271                  147077 14 +    230217 T---------------------------A-CAA-TT---ATAG-GA-A
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s Panthera_pardus.KV860321.1                                259786 14 +  18783137 T---------------------------A-CAA-TT---ATAG-GA-A
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4716933 14 -   8748460 T---------------------------A-CAA-TT---ATAG-GA-A
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1264303 13 -   2937107 T---------------------------T-C-A-TT---AGGG-GA-A
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s Papio_anubis.CM001495.2                                183437332 13 + 183742232 T---------------------------A-C-G-TT---AGAG-GA-A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1397 13 +     20448 T---------------------------G-C-G-TT---AGAG-GA-G
i Papio_cynocephalus.k141_4307930                        C 0 I 93
s Papio_hamadryas.Contig39                                20558016 13 +  20919399 T---------------------------A-C-G-TT---AGAG-GA-A
i Papio_hamadryas.Contig39                               C 0 I 279
s Papio_kindae.k141_1936966                                    140 13 +     41871 T---------------------------A-C-G-TT---AGAG-GA-G
i Papio_kindae.k141_1936966                              C 0 I 93
s Papio_ursinus.k141_3428135                                  3418 13 +      9205 T---------------------------G-C-G-TT---AGAG-GA-G
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8812 14 -     78924 T---------------------------C-CAG-TT---ATAG-GA-A
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s Perodicticus_ibeanus.k141_855320                            4616 13 +     13100 T---------------------------C-A-G-TC---AGAG-GA-A
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             2984 13 +     25941 T---------------------------C-A-G-TC---AGAG-GA-A
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25299 13 +     32600 A---------------------------A-C-A-TT---AGAA-AA-A
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25787  9 -     29689 ----------------------------------TT---TGTA-GA-G
i Petromus_typicus.PetTyp_scaffold_42190                 I 3 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8425 13 +     63832 T---------------------------A-C-A-TT---AGAG-GA-A
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38274 13 +     62158 T---------------------------G-T-G-TT---AGAA-GA-A
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33001 13 +     89929 T---------------------------G-T-G-TT---AGAG-GA-A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34417 13 +     51399 T---------------------------G-T-G-TT---AGAG-GA-A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290638 13 -  14605196 T---------------------------G-T-G-TC---AGAG-GA-A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              377 13 +     22620 T---------------------------A-C-A-CT---AGGT-AA-A
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34131 13 +     35617 T---------------------------A-C-A-TT---AGAG-GA-A
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189125418 13 + 189387572 T---------------------------A-T-G-TT---AGAG-AA-A
i Pongo_abelii.CM009266.2                                T 70 I 68
s Pongo_pygmaeus.ctg66                                     9565296 13 +   9816681 T---------------------------A-T-G-TT---AGAG-GA-T
i Pongo_pygmaeus.ctg66                                   I 204 T 274
s Presbytis_comata.k141_677006                               67918 13 -     81375 T---------------------------G-T-G-TT---AGAG-GA-A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9745 13 +     10147 T---------------------------G-T-G-TT---AGAG-GA-A
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9939 13 -     22811 T---------------------------G-C-C-TA---AGAG-GA-A
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986316 13 +   2598838 T---------------------------A-C-G-TT---AGAG-GA-A
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 2
s Propithecus_coronatus.k141_347390                          24605 13 +     38485 T---------------------------A-C-G-TT---AGAG-GA-A
i Propithecus_coronatus.k141_347390                      C 0 I 2
s Propithecus_diadema.k141_357118                              766 13 +      4256 T---------------------------A-C-G-TT---AGAG-GA-A
i Propithecus_diadema.k141_357118                        C 0 I 2
s Propithecus_edwardsi.k141_1176054                          22124 13 +     35766 T---------------------------A-C-G-TT---AGAG-GA-A
i Propithecus_edwardsi.k141_1176054                      C 0 I 2
s Propithecus_perrieri.k141_1200571                            307 13 -     24134 T---------------------------A-C-G-TT---AGAG-GA-A
i Propithecus_perrieri.k141_1200571                      C 0 I 2
s Propithecus_tattersalli.k141_790011                        24119 13 -     67325 T---------------------------A-C-G-TT---AGAG-GA-A
i Propithecus_tattersalli.k141_790011                    C 0 I 2
s Propithecus_verreauxi.k141_956661                            364 13 -      6182 T---------------------------A-C-G-TT---AGAG-GA-A
i Propithecus_verreauxi.k141_956661                      C 0 I 2
s Pteronotus_parnellii.KE909381.1                            11145 13 -     21811 T---------------------------G-T-G-CT---AGGT-GA-A
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36613 14 +     42204 T---------------------------A-CAA-TT---AGAG-GA-C
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973626  9 +  28871421 --------------------------------A-TT---AGG--GA-A
i Pteropus_alecto.KB030862.1                             I 3 C 0
s Pteropus_vampyrus.KN534172.1                                1563  9 -      8028 --------------------------------A-TT---AGG--GA-A
i Pteropus_vampyrus.KN534172.1                           I 3 C 0
s Puma_concolor.QAVW01001104.1                            20270244 14 -  38429054 T---------------------------A-CAA-TT---TTAA-GA-A
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                              9747 13 -     91421 T---------------------------G-T-G-TT---AGAG-GA-A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603881 13 +   7812017 T---------------------------G-T-G-TT---AGAG-GA-A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9720 13 -     72585 T---------------------------G-T-G-TT---AGAG-GA-A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4839 13 +     55207 T---------------------------T-C-A-TT---AGAG-GA-A
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        366856 13 -   3329780 T---------------------------A-C-A-TG---AGG-ACA-A
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             1133 13 -     11128 T---------------------------G-T-G-TG---AGAG-GA-A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230510 13 - 195417433 T---------------------------G-T-G-TG---AGAG-GA-A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7666218 13 +   7961872 T---------------------------G-T-G-TG---AGAG-GA-A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84608 13 -     96226 T---------------------------AAT-G-TT---AGG--GA-A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3491 13 +      4321 T---------------------------T-C-A-TT---AGGG-GA-A
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151336 13 -    313613 T---------------------------A-C-A-TT---GGAG-GA-A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 T 45 C 0
s Semnopithecus_entellus.k141_11662                          14262 13 -     19888 T---------------------------G-T-G-TT---AGAG-GA-A
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21467 13 +     39453 T---------------------------G-T-G-TT---AGAG-GA-A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            1991 13 +     27826 T---------------------------G-T-G-TT---AGAG-GA-A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1513 13 -     19483 T---------------------------G-T-G-TT---AGAG-GA-A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1575 13 +      7198 T---------------------------G-T-G-TT---AGAG-GA-A
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9835 13 +     15514 T---------------------------G-T-G-TT---AGAG-GA-A
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187628 13 -    191337 T---------------------------G-T-A-TT---AGAG-AA-A
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13646974  5 -  18376816 A---------------------------A-A-G-T-------------
i Sorex_araneus.JH798187.1                               C 0 I 1
s Spermophilus_dauricus.KZ294078.1                         1948167 13 -   3870691 T---------------------------A-C-A-TT---ATAG-AA-A
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27155 14 +     97271 T---------------------------A-CAA-TT---AGAG-GA-A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14162 14 -    196729 T---------------------------A-CAA-TC---ATAG-CA-A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   62882410 13 -  69701581 T---------------------------T-C-A-TT---AGAG-GA-C
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1088018 13 -   1523678 T---------------------------A-T-G-TT---AGAG-GA-A
i Symphalangus_syndactylus.tarseq_199                    I 207 T 207
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6764  9 +     41958 ----------------------------------TC---AGGT-GA-A
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 3 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69406 12 +    116680 T---------------------------G-A-C-TA---AGG--GA-A
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115143 13 -    156842 T---------------------------A-C-A-TT---AGAG-GA-A
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383598 13 +    539355 T---------------------------A-C-A-TT---AGAG-GA-A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10592 13 +     70052 T---------------------------A-T-G-TT---AGAG-AA-A
i Tarsius_lariang.k141_2201908                           I 1 C 0
s Tarsius_wallacei.k141_780063                               14897 13 +     25099 T---------------------------A-T-G-TT---AGAG-AA-A
i Tarsius_wallacei.k141_780063                           I 1 C 0
s Theropithecus_gelada.CM009954.1                        186422841 13 + 186847797 T---------------------------A-C-G-TT---AGAG-GA-A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103128  9 +    114563 ----------------------------------TT---AGAG-GA-A
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 3 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78901 13 +    610378 T---------------------------G-C-A-CT---AGGG-GA-A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          5572 13 -     20410 T---------------------------G-T-G-TT---AGAG-GA-A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9764 13 +     15221 T---------------------------G-T-G-TT---AGAG-GA-A
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5672 13 +     19930 T---------------------------G-T-G-TT---AGAG-GA-A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2099 13 -     19997 T---------------------------G-T-G-TT---AGAG-GA-A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42218 13 -     60166 T---------------------------G-T-G-TT---AGAG-GA-A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9690 13 -     27529 T---------------------------G-T-G-TT---AGAG-GA-A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9630 13 -     18194 T---------------------------G-T-G-TT---AGAG-GA-A
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3366 13 -     21137 T---------------------------G-T-G-TT---AGAG-GA-A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2068 13 -     10723 T---------------------------G-T-G-TT---AGAG-GA-A
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1221 13 +      9834 T---------------------------G-T-G-TT---AGAG-GA-A
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19539 13 +     32220 T---------------------------G-T-G-TT---AGAG-GA-A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933636 13 +   6242583 T---------------------------G-T-G-TT---AGAG-GA-A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2881 13 +     20839 T---------------------------G-T-G-TT---AGAG-GA-A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    617 13 -      1748 T---------------------------T-C-A-TT---AGAG-GA-A
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 I 2
s Tupaia_chinensis.KB320699.1                              2149528 40 +   4065304 TTNNNNNNNNNNNNNNNNNNNNNNNNNNN-N-N-NN---AGAG-GA-A
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     3147 13 -     10553 T---------------------------C-C-A-GC---AGAG-GA-A
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737625 13 +  33153633 T---------------------------A-C-A-TT---AGAG-GA-A
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_97021                    1856 13 -      4736 T---------------------------A-C-A-TT---GGAG-GA-A
i Uropsilus_gracilis.UroGra_scaffold_97021               C 0 I 10
s Ursus_maritimus.KK499267.1                               4846856 14 -   5085361 T---------------------------A-CAG-TT---AGAG-GA-A
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368329 13 -   5488506 T---------------------------A-C-C-TT---AGAG-GA-A
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7333 14 -     43706 T---------------------------A-CAA-TT---ATAG-GA-A
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19662 13 -     24430 T---------------------------A-C-A-TT---AAAG-GA-A
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1781 14 +      2932 T---------------------------A-CAA-TT---AGAG-GA-A
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9939 13 +     63895 C---------------------------A-T-A-TT---AGAG-AA-A
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11317 13 +     12536 T---------------------------A-C-A-TT---AGAG-GA-A
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   1874 68 +      8208 T
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Papio_papio.k141_802527                                     3591 59 +     27711 T
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    15418  9 -    145209 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            4816 68 -      6351 T
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1278  9 +     62944 CTCT--A---------------------------TAAA
s Acinonyx_jubatus.LLWD01001279.1                           823244  9 -   1699592 CTCT--A---------------------------CTAA
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 1
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506935  9 -  29979442 CTCT--A---------------------------CAAG
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 1
s Ailurus_fulgens.LNAC01001112.1                             75159  9 -    347723 CTCT--A---------------------------CAAA
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 1
s Allactaga_bullata.AllBul_scaffold_9566                     64938  7 -     89534 TTCT--A---------------------------TA--
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 3
s Allenopithecus_nigroviridis.k141_3361533                    9265  9 -     52922 CTGT--A---------------------------TAGA
i Allenopithecus_nigroviridis.k141_3361533               C 0 I 1
s Allochrocebus_lhoesti.k141_4309873                          9192  9 -     28001 CTGT--A---------------------------TAGA
i Allochrocebus_lhoesti.k141_4309873                     C 0 I 1
s Allochrocebus_preussi.k141_310680                           9318  9 -      9772 CTGT--A---------------------------TAGA
i Allochrocebus_preussi.k141_310680                      C 0 I 1
s Allochrocebus_solatus.k141_166128                            475  9 -     12518 CTGT--A---------------------------TAGA
i Allochrocebus_solatus.k141_166128                      C 0 I 1
s Ammotragus_lervia.NIVO01071767.1                          675109  9 -   2318259 CTCT--A---------------------------CAAC
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 1
s Anoura_caudifer.AnoCau_scaffold_1412                      183058  9 +    412891 CTCC--A---------------------------TCAA
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 1
s Antilocapra_americana.AntAmePen_scaffold_12469             97561  9 -    100397 CCCT--A---------------------------TAAC
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 I 1
s Aplodontia_rufa.AprRuf_scaffold_68852                       7218  7 +     20879 CTCT--A---------------------------TA--
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 3
s Arctocebus_calabarensis.k141_288239                        14396  9 +     17124 CTCT--G---------------------------TCAA
i Arctocebus_calabarensis.k141_288239                    C 0 I 1
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2410  9 +     43469 CTCC--G---------------------------TCAA
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 1
s Avahi_laniger.k141_765380                                  49260  4 -     92717 ----------------------------------TAAA
i Avahi_laniger.k141_765380                              I 2 I 1
s Avahi_peyrierasi.k141_1424874                              49885  4 +     85213 ----------------------------------TAAA
i Avahi_peyrierasi.k141_1424874                          I 2 I 1
s Balaenoptera_acutorostrata.KI537508.1                   15191494  9 +  23207421 CTCT--A---------------------------TAAA
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 1
s Balaenoptera_bonaerensis.DF707048.1                         1960  9 -     18090 CTCT--A---------------------------TAAA
i Balaenoptera_bonaerensis.DF707048.1                    C 0 I 1
s Beatragus_hunteri.BeaHun_scaffold_50177                    26031  9 +     34529 CTCT--A---------------------------CAAC
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 1
s Bison_bison.KN261452.1                                    199070  9 -    288883 CTCT--A---------------------------TAAC
i Bison_bison.KN261452.1                                 C 0 I 1
s Bos_indicus.CM003047.1                                  20272275  9 +  48749331 CTCT--A---------------------------TAAC
i Bos_indicus.CM003047.1                                 C 0 I 1
s Bos_mutus.JH880303.1                                     1124835  9 -   1948126 CTCT--A---------------------------TAAC
i Bos_mutus.JH880303.1                                   C 0 I 1
s Bos_taurus.CM000203.6                                   18082913  9 +  45695690 CTCT--A---------------------------TAAC
i Bos_taurus.CM000203.6                                  C 0 I 1
s Bubalus_bubalis.KI419123.1                               2818402  9 +   4408762 CTCT--A---------------------------TAAC
i Bubalus_bubalis.KI419123.1                             C 0 I 1
s Camelus_bactrianus.KN276810.1                            9998853  9 -  17673402 CTCC--G---------------------------TAAC
i Camelus_bactrianus.KN276810.1                          C 0 I 1
s Camelus_dromedarius.KN272107.1                           2331317  9 -   7040546 CTCC--G---------------------------TAAC
i Camelus_dromedarius.KN272107.1                         C 0 I 1
s Camelus_ferus.KB017975.1                                  399593  9 -   1652518 CTCC--G---------------------------TAAC
i Camelus_ferus.KB017975.1                               C 0 I 1
s CanFam4.chr16                                           17795723  9 -  60362399 CTCT--A---------------------------CAAA
i CanFam4.chr16                                          C 0 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181780  9 -    185531 CTCT--A---------------------------CAAA
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 I 1
s Canis_lupus_dingo.QKWQ01000480.1                         9031167  9 -   9314153 CTCT--A---------------------------CAAA
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 1
s Canis_lupus_familiaris.chr16                            17955431  9 -  59632846 CTCT--A---------------------------CAAA
i Canis_lupus_familiaris.chr16                           C 0 I 1
s Canis_lupus_orion.HG994398.1                            18496732  9 +  63665305 CTCT--A---------------------------CAAA
i Canis_lupus_orion.HG994398.1                           C 0 I 1
s Capra_aegagrus.CM003241.1                               18829227  9 +  46296322 CTCT--A---------------------------CAAC
i Capra_aegagrus.CM003241.1                              C 0 I 1
s Capra_hircus.CM004588.1                                 18059947  9 -  44709034 CTCT--A---------------------------CAAC
i Capra_hircus.CM004588.1                                C 0 I 1
s Carlito_syrichta.NW_007259797.1                           140990  9 -    496798 ttca--a---------------------------caaa
i Carlito_syrichta.NW_007259797.1                        C 0 I 1
s Carollia_perspicillata.CarPer_scaffold_92756                2828  9 -     11696 CTCC--A---------------------------TCAA
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 1
s Castor_canadensis.CasCan_scaffold_2074                    133596  5 +    179628 CTCT--A-------------------------------
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 3
s Catagonus_wagneri.CatWag_scaffold_2839                     89160  9 +    217609 ATCT--A---------------------------TAAA
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 1
s Cavia_aperea.AVPZ01000300.1                             18347415  7 -  23392119 CTCT--A---------------------------TA--
i Cavia_aperea.AVPZ01000300.1                            C 0 I 3
s Cavia_porcellus.DS562891.1                              18359675  7 -  23407841 CTCT--A---------------------------TA--
i Cavia_porcellus.DS562891.1                             C 0 I 3
s Cavia_tschudii.CavTsc_scaffold_8919                        98550  7 +    143979 CTCT--A---------------------------TA--
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 I 3
s Cephalopachus_bancanus.k141_2037105                         4906  9 -      8605 TTCA--A---------------------------CAAA
i Cephalopachus_bancanus.k141_2037105                    C 0 I 1
s Ceratotherium_simum.JH767749.1                          12227826  9 +  27778364 CTCT--A---------------------------TAAA
i Ceratotherium_simum.JH767749.1                         C 0 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2544  9 -      3715 CTCT--A---------------------------TAAA
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 I 1
s Cercocebus_atys.KQ010504.1                               4470236  9 +   4669795 CTGT--A---------------------------TAGA
i Cercocebus_atys.KQ010504.1                             C 0 I 1
s Cercocebus_chrysogaster.k141_393940                         8785  9 -     19203 CTGT--A---------------------------TAGA
i Cercocebus_chrysogaster.k141_393940                    C 0 I 1
s Cercocebus_lunulatus.k141_3846941                           3204  9 +      8260 CTGT--A---------------------------TAGA
i Cercocebus_lunulatus.k141_3846941                      C 0 I 1
s Cercocebus_torquatus.k141_3057011                           3434  9 +     27781 CTGT--A---------------------------TAGA
i Cercocebus_torquatus.k141_3057011                      C 0 I 1
s Cercopithecus_ascanius.k141_1024104                         3580  9 -     20310 CTGT--A---------------------------TAGA
i Cercopithecus_ascanius.k141_1024104                    C 0 I 1
s Cercopithecus_cephus.k141_1078548                           6564  9 +     29689 CTGT--A---------------------------TAGA
i Cercopithecus_cephus.k141_1078548                      C 0 I 1
s Cercopithecus_diana.k141_2427854                             917  9 +      9989 CTGT--A---------------------------TAGA
i Cercopithecus_diana.k141_2427854                       C 0 I 1
s Cercopithecus_hamlyni.k141_187466                           9252  9 -     27936 CTGT--A---------------------------TAGA
i Cercopithecus_hamlyni.k141_187466                      C 0 I 1
s Cercopithecus_lowei.k141_457449                             9271  9 -     11289 CTGT--A---------------------------TAGA
i Cercopithecus_lowei.k141_457449                        C 0 I 1
s Cercopithecus_albogularis.ctg5                                38811647  9 +  39242232 CTGT--A---------------------------TAGA
i Cercopithecus_albogularis.ctg5                               C 0 I 1
s Cercopithecus_mona.ctg39                                21217338  9 -  21565898 CTGT--A---------------------------TAGA
i Cercopithecus_mona.ctg39                               C 0 I 1
s Cercopithecus_neglectus.k141_2526306                       34458  9 -     53127 CTGT--A---------------------------TAGA
i Cercopithecus_neglectus.k141_2526306                   C 0 I 1
s Cercopithecus_nictitans.k141_3278028                        1750  9 +      7159 CTGT--A---------------------------TAGA
i Cercopithecus_nictitans.k141_3278028                   C 0 I 1
s Cercopithecus_petaurista.k141_807961                        9263  9 -     27947 CTGT--A---------------------------TAGA
i Cercopithecus_petaurista.k141_807961                   C 0 I 1
s Cercopithecus_pogonias.k141_822820                          9239  9 +     17596 CTGT--A---------------------------TAGA
i Cercopithecus_pogonias.k141_822820                     C 0 I 1
s Cercopithecus_roloway.k141_3180641                         39733  9 -     41420 CTGT--A---------------------------TAGA
i Cercopithecus_roloway.k141_3180641                     C 0 I 1
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4748  9 -      6351 CGTG--G---------------------------CAAA
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       T 68 I 1
s Cheirogaleus_major.k141_333249                             16679  4 -     52598 ----------------------------------TAAA
i Cheirogaleus_major.k141_333249                         I 2 I 1
s Cheirogaleus_medius.k141_1055463                           12028  4 +     57038 ----------------------------------TAAA
i Cheirogaleus_medius.k141_1055463                       I 2 I 1
s Chinchilla_lanigera.JH722012.1                           1248447  7 +   2543920 CTCT--A---------------------------TA--
i Chinchilla_lanigera.JH722012.1                         C 0 I 3
s Chlorocebus_aethiops.ctg25                              18423202  9 -  18827391 CTGT--A---------------------------TAGA
i Chlorocebus_aethiops.ctg25                             C 0 I 1
s Chlorocebus_pygerythrus.k141_1025673                        9645  9 -     50209 CTGT--A---------------------------TAGA
i Chlorocebus_pygerythrus.k141_1025673                   C 0 I 1
s Chlorocebus_sabaeus.CM001947.1                         135416650  9 + 135778131 CTGT--A---------------------------TAGA
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 1
s Choloepus_didactylus.ChoDid_scaffold_45914                 15105  9 +     19366 CTTG--A---------------------------TAAA
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 I 1
s Choloepus_hoffmanni.KN194906.1                            170204  9 +    839153 CTTG--A---------------------------TAAA
i Choloepus_hoffmanni.KN194906.1                         C 0 I 1
s Colobus_angolensis.KN981557.1                            1905179  9 +   2368649 CTGT--A---------------------------TAGA
i Colobus_angolensis.KN981557.1                          C 0 I 1
s Colobus_guereza.LG01                                   199944824 36 + 200372422 CTGT--ATACACCTGCTGTGTTAGAGGAACTGTACAGA
i Colobus_guereza.LG01                                   C 0 I 1
s Colobus_polykomos.k141_906115                              31718  9 +     84244 CTGT--A---------------------------TAGA
i Colobus_polykomos.k141_906115                          C 0 I 1
s Condylura_cristata.JH655891.1                           17545935  9 -  53390261 CTTT--A---------------------------GGAA
i Condylura_cristata.JH655891.1                          C 0 I 1
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10447  9 -     20389 CTCT--A---------------------------TGAA
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 1
s Crocidura_indochinensis.CroInd_scaffold_287352               333  9 +      4208 CTCCTTG---------------------------TA--
i Crocidura_indochinensis.CroInd_scaffold_287352         I 1 I 18
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24189  9 -     87169 TTCT--A---------------------------CTAA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 1
s Cuniculus_paca.CunPac_flattened_line_231100                 2799  7 +      5455 CTCT--A---------------------------TA--
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 I 3
s Dasyprocta_punctata.DasPun_flattened_line_206793            1182  7 +      3576 CTCT--A---------------------------TA--
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 I 3
s Dasypus_novemcinctus.JH564415.1                            61018  9 +   2246927 TGTG--A---------------------------TAAA
i Dasypus_novemcinctus.JH564415.1                        C 0 I 1
s Daubentonia_madagascariensis.ctg71                      12532843  9 -  12879189 CTCT--G---------------------------TAAA
i Daubentonia_madagascariensis.ctg71                     C 0 I 1
s Delphinapterus_leucas.KZ290073.1                        16811130  9 +  35494412 CTCT--A---------------------------TAAA
i Delphinapterus_leucas.KZ290073.1                       C 0 I 1
s Desmodus_rotundus.KZ672289.1                             8627859  9 +  20541912 CTCC--A---------------------------TTAA
i Desmodus_rotundus.KZ672289.1                           C 0 I 1
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669359  9 +   1390856 CTCT--A---------------------------TAAA
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 1
s Diceros_bicornis.DicBicMic_scaffold_5955                    2434  9 +    198055 ATCT--A---------------------------TAAA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 1
s Dinomys_branickii.DinBra_scaffold_21862                    34225  7 +     67921 TTCT--A---------------------------TA--
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 3
s Dipodomys_ordii.KN672350.1                              18895755  7 +  37912305 tttt--a---------------------------ta--
i Dipodomys_ordii.KN672350.1                             C 0 I 3
s Dipodomys_stephensi.DipSte_scaffold_75855                  11965  7 +     14536 TTTT--A---------------------------TA--
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 I 3
s Dolichotis_patagonum.DolPat_scaffold_30833                 31439  7 -     42551 CTCT--A---------------------------TA--
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 I 3
s Eidolon_helvum.KE759718.1                                   7366  9 +     11740 CTCT--A---------------------------TAAA
i Eidolon_helvum.KE759718.1                              C 0 I 1
s Elaphurus_davidianus.JRFZ01104969.1                       310231  9 +    607251 CTCT--A---------------------------TAAC
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 1
s Elephantulus_edwardii.JH947257.1                         1088954  9 +  10337057 CTCG--A---------------------------TAAA
i Elephantulus_edwardii.JH947257.1                       C 0 I 1
s Enhydra_lutris.KZ291758.1                               16325721  9 -  41312741 CTCT--A---------------------------CAAA
i Enhydra_lutris.KZ291758.1                              C 0 I 1
s Eptesicus_fuscus.JH977646.1                              2144016  9 -  14770903 ATCT--A---------------------------TAAA
i Eptesicus_fuscus.JH977646.1                            C 0 I 1
s Equus_asinus.JREZ01000139.1                              1279701  9 +   4378816 CTCT--A---------------------------CAAA
i Equus_asinus.JREZ01000139.1                            C 0 I 1
s Equus_caballus.CM000403.2                               18527522  9 -  39960074 CTCT--A---------------------------CAAA
i Equus_caballus.CM000403.2                              C 0 I 1
s Equus_przewalskii.KK951119.1                               29537  9 +    498745 CTCT--A---------------------------CAAA
i Equus_przewalskii.KK951119.1                           C 0 I 1
s Erinaceus_europaeus.JH835339.1                           3325291  9 -   7059049 TGT-T-A---------------------------CAAA
i Erinaceus_europaeus.JH835339.1                         C 0 I 1
s Erythrocebus_patas.Contig38                             21199881  9 -  21539334 CTGT--A---------------------------TAGA
i Erythrocebus_patas.Contig38                            C 0 I 1
s Eschrichtius_robustus.EscRob_flattened_line_8968           10806  9 +    133382 CTCT--A---------------------------TAAA
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 1
s Eubalaena_japonica.EubJap_flattened_line_31514             24743  9 -     44125 CTCT--A---------------------------TAAA
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 I 1
s Felis_catus.AANG03299807.1                                   366  9 -       507 CTCT--A---------------------------CTAA
i Felis_catus.AANG03299807.1                             C 0 I 1
s Felis_catus_fca126.CM031415.1                           20191944  9 + 205367284 CTCT--A---------------------------CTAA
i Felis_catus_fca126.CM031415.1                          C 0 I 1
s Felis_nigripes.FelNig_flattened_line_20823                  5469  9 -     36744 CTCT--A---------------------------CTAA
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 1
s Fukomys_damarensis.KN121974.1                             848449  7 +   3816255 CTCT--C---------------------------TA--
i Fukomys_damarensis.KN121974.1                          C 0 I 3
s Galagoides_demidoff.k141_31856                              3156  9 -      3432 cact--t---------------------------taga
i Galagoides_demidoff.k141_31856                         I 7 I 1
s Galeopterus_variegatus.GalVar_scaffold_56069               25413  9 +     26054 CTCT--G---------------------------TGAA
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 I 1
s Glis_glis.GliGli_scaffold_19807                            30304  7 +     49224 CTCT--A---------------------------TA--
i Glis_glis.GliGli_scaffold_19807                        C 0 I 2
s Gorilla_beringei.k141_3596273                              10370  9 -     32273 CTCT--A---------------------------TAAA
i Gorilla_beringei.k141_3596273                          C 0 I 140
s Gorilla_gorilla.LT578341.1                             186332520  9 + 186649187 CTCT--A---------------------------TAAA
i Gorilla_gorilla.LT578341.1                             I 13 I 140
s Graphiurus_murinus.GraMur_scaffold_10447                   30032  7 +     78134 CTCT--G---------------------------TA--
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 2
s Helogale_parvula.HelPar_flattened_line_2585               238106  9 +    327341 CTCT--G---------------------------TTAA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 1
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17431  9 +     36099 CTCT--A---------------------------CAAC
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 I 1
s Heterocephalus_glaber.JH602082.1                        20659328  7 +  22651954 CTCT--A---------------------------TA--
i Heterocephalus_glaber.JH602082.1                       C 0 I 3
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 191  9 +       961 CTCT--G---------------------------TGAA
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 I 1
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111986  8 +    128679 CTCT--G---------------------------TAA-
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 I 2
s Hipposideros_armiger.JXIK01000431.1                       108325  7 +   1711038 CTCT--A---------------------------TA--
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 2
s Hipposideros_galeritus.HipGal_scaffold_29171               39766  7 +     43066 CTCT--A---------------------------TA--
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 I 2
s Hoolock_leuconedys.ctg274                                    429209  9 +    630532 CTCT--A---------------------------CAAA
i Hoolock_leuconedys.ctg274                                 C 0 I 1
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40571  9 +     55795 CTCT--A---------------------------CTAA
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 1
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19797  7 -    143317 TTCT--A---------------------------TA--
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 3
s Hylobates_agilis.k141_307679                               12127  9 -     15490 CTCT--A---------------------------CAAA
i Hylobates_agilis.k141_307679                           C 0 I 1
s Hylobates_klossii.k141_282416                              54132  9 +     67168 CTCT--A---------------------------CAAA
i Hylobates_klossii.k141_282416                          C 0 I 1
s Hylobates_pileatus_b.LG02                                     189537785  8 - 191637585 CTCT--A---------------------------TAA-
i Hylobates_pileatus_b.LG02                                     C 0 I 1
s Hylobates_pileatus_a.tarseq_633                            3330677  9 -  11177569 CTCT--A---------------------------CAAA
i Hylobates_pileatus_a.tarseq_633                          C 0 I 1
s Hystrix_cristata.HysCri_scaffold_5660                      80871  7 +    135385 TTCT--A---------------------------TA--
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 3
s Ictidomys_tridecemlineatus.JH393364.1                    7514538  7 -   7955117 ATCT--A---------------------------TA--
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 3
s Indri_indri.k141_3655594                                   18115  9 +     31101 CTCT--G---------------------------TAAA
i Indri_indri.k141_3655594                               C 0 I 1
s Inia_geoffrensis.IniGeo_flattened_line_48101               22347  9 +     23964 CTCT--A---------------------------TAAA
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 I 1
s Jaculus_jaculus.JH725527.1                               8271318  7 -   9596543 TTGT--A---------------------------TA--
i Jaculus_jaculus.JH725527.1                             C 0 I 3
s Kogia_breviceps.KogBre_flattened_line_192630                1614  9 -      3359 CTCT--A---------------------------TAAA
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 I 1
s Lasiurus_borealis.LasBor_scaffold_32767                    12195  9 -     42476 GTCT--A---------------------------TAAA
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 13
s Lepilemur_ankaranensis.k141_596936                          6754  4 -     23766 ----------------------------------TAAA
i Lepilemur_ankaranensis.k141_596936                     I 5 I 1
s Lepilemur_dorsalis.k141_577674                             24701  4 +     45836 ----------------------------------TAAA
i Lepilemur_dorsalis.k141_577674                         I 5 I 1
s Lepilemur_ruficaudatus.k141_420445                         31612  4 -     32627 ----------------------------------TAAA
i Lepilemur_ruficaudatus.k141_420445                     I 5 I 1
s Lepilemur_septentrionalis.k141_185316                      22756  4 +     54090 ----------------------------------TAAA
i Lepilemur_septentrionalis.k141_185316                  I 5 I 1
s Leptonychotes_weddellii.KB714746.1                       3036054  9 +   3914936 CTCT--A---------------------------CAAA
i Leptonychotes_weddellii.KB714746.1                     C 0 I 1
s Lipotes_vexillifer.KE559953.1                             267425  9 -    662738 CTCT--A---------------------------TAAA
i Lipotes_vexillifer.KE559953.1                          I 2 I 1
s Lophocebus_aterrimus.ctg367                              1431406  9 +   1826925 CTGT--A---------------------------CAGA
i Lophocebus_aterrimus.ctg367                            C 0 I 1
s Loris_lydekkerianus.k141_2539221                             648  9 +     11245 CTCT--G---------------------------TCAA
i Loris_lydekkerianus.k141_2539221                       C 0 I 1
s Loris_tardigradus.ctg83                                   999484  9 +   6120653 CTCT--G---------------------------TCAA
i Loris_tardigradus.ctg83                                C 0 I 1
s Loxodonta_africana.GL010049.1                            4214464  9 -  43346337 CTCT--G---------------------------TAAA
i Loxodonta_africana.GL010049.1                          C 0 I 1
s Lycaon_pictus.CM007581.1                                17951671  9 -  59628241 CTCT--A---------------------------CAAA
i Lycaon_pictus.CM007581.1                               C 0 I 1
s Macaca_arctoides.k141_2326796                               1591  9 +     40492 CTGT--G---------------------------TAGA
i Macaca_arctoides.k141_2326796                          C 0 I 1
s Macaca_assamensis.Contig5                               59670851  9 +  60120075 CTGT--G---------------------------TAGA
i Macaca_assamensis.Contig5                              C 0 I 1
s Macaca_cyclopis.k119_18836                                  7349  9 -     26193 CTGT--G---------------------------TAGA
i Macaca_cyclopis.k119_18836                             C 0 I 1
s Macaca_fascicularis.k141_814140                            75143  9 -    114318 CTGT--A---------------------------TAGA
i Macaca_fascicularis.k141_814140                        C 0 I 1
s Macaca_fuscata.k119_255327                                   862  9 -     23192 CTGT--A---------------------------TAGA
i Macaca_fuscata.k119_255327                             C 0 I 1
s Macaca_leonina.k141_3550399                                10315  9 -     29190 CTGT--A---------------------------TAGA
i Macaca_leonina.k141_3550399                            C 0 I 1
s Macaca_maura.k141_2733130                                  18882  9 +     37952 CTGT--A---------------------------TAGA
i Macaca_maura.k141_2733130                              C 0 I 1
s Macaca_mulatta.NC_041758.1                             186833970  9 + 187317192 CTGT--G---------------------------TAGA
i Macaca_mulatta.NC_041758.1                             C 0 I 1
s Macaca_nemestrina.KQ007038.1                            25452531  9 -  25927173 CTGT--A---------------------------TAGA
i Macaca_nemestrina.KQ007038.1                           C 0 I 1
s Macaca_nigra.k141_1655396                                  74731  9 +     89720 CTGT--A---------------------------TAGA
i Macaca_nigra.k141_1655396                              C 0 I 1
s Macaca_radiata.k141_3680011                                 1728  9 +     20474 CTGT--G---------------------------TAGA
i Macaca_radiata.k141_3680011                            C 0 I 1
s Macaca_siberu.k141_635500                                   1529  9 -     14993 CTGT--A---------------------------TAGA
i Macaca_siberu.k141_635500                              C 0 I 1
s Macaca_silenus.Contig273                                  324402  9 -    668171 CTGT--A---------------------------TAGA
i Macaca_silenus.Contig273                               C 0 I 1
s Macaca_thibetana.k99_7456                                  15671  9 -     15935 CTGT--G---------------------------TAGA
i Macaca_thibetana.k99_7456                              C 0 I 1
s Macaca_tonkeana.k141_1498238                               20468  9 -     45290 CTGT--A---------------------------TAGA
i Macaca_tonkeana.k141_1498238                           C 0 I 1
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87512  9 +     94391 CTCT--A---------------------------TAAA
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 1
s Mandrillus_leucophaeus.scaffold280                      23932023  9 -  24302211 CTGT--A---------------------------CAGA
i Mandrillus_leucophaeus.scaffold280                     C 0 I 1
s Mandrillus_sphinx.Contig270                               346201  9 +    752769 CTGT--A---------------------------CAGA
i Mandrillus_sphinx.Contig270                            C 0 I 1
s Manis_javanica.JSZB01003497.1                              15558  4 +    737560 CTCT----------------------------------
i Manis_javanica.JSZB01003497.1                          C 0 I 4
s Manis_pentadactyla.KN006162.1                              46947  4 -    317179 CTCT----------------------------------
i Manis_pentadactyla.KN006162.1                          C 0 I 4
s Marmota_marmota.CZRN01000018.1                          33097388  7 -  40650429 atct--a---------------------------ta--
i Marmota_marmota.CZRN01000018.1                         C 0 I 3
s Mellivora_capensis.MelCap_flattened_line_69365              6185  9 +     13704 CTCT--A---------------------------CAAA
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 1
s Mesoplodon_bidens.MesBid_scaffold_108144                    3015  9 +     10310 CTCT--A---------------------------TAAA
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 I 1
s Microcebus_murinus.CM007674.1                           18283280  4 -  93316391 ----------------------------------TACA
i Microcebus_murinus.CM007674.1                          I 5 I 1
s Micronycteris_hirsuta.MicHir_scaffold_52381                13370  9 -     19307 CTCC--A---------------------------TCAA
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 1
s Miniopterus_natalensis.LDJU01000034.1                    1849044  9 +   8254450 CTCT--A---------------------------TAAG
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 1
s Miniopterus_schreibersii.MinSch_scaffold_18080             32920  9 +     64694 CTCT--T---------------------------TAAG
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 1
s Miopithecus_ogouensis.k141_534055                           3758  9 -     28506 CTGT--A---------------------------TAGA
i Miopithecus_ogouensis.k141_534055                      C 0 I 1
s Mirounga_angustirostris.MirAng_flattened_line_22144        62384  9 -     63350 CTCT--A---------------------------CAAA
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 I 1
s Mirza_zaza.k141_952172                                      4635  4 -     37649 ----------------------------------TACA
i Mirza_zaza.k141_952172                                 I 5 I 1
s Monodon_monoceros.MonMon_M_scaffold_103                    26520  9 -    437263 CTCT--A---------------------------TAAA
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 1
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137776  9 -    366855 CTCC--A---------------------------TCAA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 1
s Moschus_moschiferus.MosMos_scaffold_61429                  27371  9 -     27816 CTCT--A---------------------------TAAC
i Moschus_moschiferus.MosMos_scaffold_61429              C 0 I 1
s Mungos_mungo.MunMun_flattened_line_23663                   31307  9 +     37127 CTCT--A---------------------------CTAA
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 1
s Murina_feae.MurFea_scaffold_85699                           5070  9 +     14753 ATCT--A---------------------------TAAA
i Murina_feae.MurFea_scaffold_85699                      C 0 I 1
s Muscardinus_avellanarius.MusAve_scaffold_82313              2297  7 +     14296 CTCT--G---------------------------TA--
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 2
s Mustela_putorius.JH418006.1                               297616  9 -  14710649 CTCT--A---------------------------CAAA
i Mustela_putorius.JH418006.1                            C 0 I 1
s Myotis_brandtii.KE162005.1                                278244  5 -  10118263 ------A---------------------------TAAA
i Myotis_brandtii.KE162005.1                             C 0 I 1
s Myotis_davidii.KB100139.1                                1585801  5 -   6019432 ------A---------------------------TAAA
i Myotis_davidii.KB100139.1                              C 0 I 1
s Myotis_lucifugus.GL429869.1                              3902010  5 -   4330536 ------A---------------------------TAAA
i Myotis_lucifugus.GL429869.1                            C 0 I 1
s Myotis_myotis.MyoMyo_scaffold_28916                        32569  5 +     33610 ------A---------------------------TAAA
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 I 1
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186056  9 +    196477 CATG--A---------------------------TAAT
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 I 1
s Nannospalax_galili.KL204047.1                            2025459  7 -   3037898 CTCT--G---------------------------TA--
i Nannospalax_galili.KL204047.1                          C 0 I 3
s Nasalis_larvatus.k141_413338                                9771  9 +     21681 CTGT--A---------------------------TAGA
i Nasalis_larvatus.k141_413338                           C 0 I 1
s Neophocaena_asiaeorientalis.KZ687982.1                   5865476  9 +   7148211 CTCT--A---------------------------TAAA
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 1
s Noctilio_leporinus.NocLep_scaffold_251                    756340  9 +    783361 CTCC--A---------------------------TAAC
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 1
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145932  9 -   9404916 CTCT--A---------------------------CAAA
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 1
s Nycticebus_bengalensis.LG01                            102574452  9 - 196305487 CTCT--G---------------------------TCAA
i Nycticebus_bengalensis.LG01                            C 0 I 1
s Nycticebus_coucang.k141_5327727                             2138  9 +      8486 CTCT--G---------------------------TCAA
i Nycticebus_coucang.k141_5327727                        C 0 I 1
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744879  9 + 199412804 CTCT--G---------------------------TCAA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 1
s Ochotona_princeps.JH802162.1                             1355711  9 +   3988456 CACA--T---------------------------TAAA
i Ochotona_princeps.JH802162.1                           C 0 I 1
s Odobenus_rosmarus.KB229312.1                              500673  9 -   2017862 CTCT--A---------------------------CAAA
i Odobenus_rosmarus.KB229312.1                           C 0 I 1
s Odocoileus_virginianus.KZ100018.1                         144604  5 +    630418 CTCT--A-------------------------------
i Odocoileus_virginianus.KZ100018.1                      C 0 I 4
s Orcinus_orca.KB316932.1                                  2781391  9 -  10937097 CTCT--A---------------------------TAAA
i Orcinus_orca.KB316932.1                                C 0 I 1
s Orycteropus_afer.OryAfe_flattened_line_144387               6789  9 -     18566 CTCT--A---------------------------TAAA
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 I 1
s Otocyon_megalotis.JAEUCK010005147.1                       458686  9 -    559221 CTCT--A---------------------------CAAA
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 1
s Ovis_aries.CM001607.2                                   17584962  9 +  44047080 CTCT--A---------------------------CAAC
i Ovis_aries.CM001607.2                                  C 0 I 1
s Ovis_canadensis.OviCan_scaffold_2572                      173383  9 -    191736 CTCT--A---------------------------CAAC
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 I 1
s Pan_paniscus.KQ411613.1                                    38559  8 +     80009 ctct--a---------------------------taa-
i Pan_paniscus.KQ411613.1                                I 2405 I 1
s Pan_troglodytes.CM009242.2                             189137314  9 + 189151597 ctct--a---------------------------taaa
i Pan_troglodytes.CM009242.2                             n 0 I 209
s Panthera_onca.PanOnc_flattened_line_3271                  147091  9 +    230217 CTCT--A---------------------------CTAA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 1
s Panthera_pardus.KV860321.1                                259800  9 +  18783137 CTCT--A---------------------------CTAA
i Panthera_pardus.KV860321.1                             C 0 I 1
s Panthera_tigris.KE722367.1                               4716947  9 -   8748460 CTCT--A---------------------------CTAA
i Panthera_tigris.KE722367.1                             C 0 I 1
s Pantholops_hodgsonii.KE114653.1                          1264316  9 -   2937107 CTCT--A---------------------------CAAC
i Pantholops_hodgsonii.KE114653.1                        C 0 I 1
s Papio_anubis.CM001495.2                                183437345  9 + 183742232 CTGT--A---------------------------TAGA
i Papio_anubis.CM001495.2                                C 0 I 1
s Papio_cynocephalus.k141_4307930                             1503  9 +     20448 CTGT--A---------------------------TAGA
i Papio_cynocephalus.k141_4307930                        I 93 I 1
s Papio_hamadryas.Contig39                                20558308  9 +  20919399 CTGT--A---------------------------TAGA
i Papio_hamadryas.Contig39                               I 279 T 278
s Papio_kindae.k141_1936966                                    246  9 +     41871 CTGT--A---------------------------TAGA
i Papio_kindae.k141_1936966                              I 93 I 1
s Papio_papio.k141_802527                                     3532  9 +     27711 CTGT--A---------------------------TAGA
i Papio_papio.k141_802527                                T 59 I 1
s Papio_ursinus.k141_3428135                                  3431  9 +      9205 CTGT--G---------------------------TAGG
i Papio_ursinus.k141_3428135                             C 0 I 1
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8826  9 -     78924 TTCT--A---------------------------CCAA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 1
s Perodicticus_ibeanus.k141_855320                            4629  9 +     13100 CTCT--G---------------------------TCAA
i Perodicticus_ibeanus.k141_855320                       C 0 I 1
s Perodicticus_potto.k141_1092580                             2997  9 +     25941 CTCT--G---------------------------TCAA
i Perodicticus_potto.k141_1092580                        C 0 I 1
s Perognathus_longimembris.PerPac_flattened_line_34437       25312  4 +     32600 TGCT----------------------------------
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25796  7 -     29689 CTCT--A---------------------------TA--
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 I 3
s Phocoena_phocoena.PhoPho_flattened_line_24159               8438  9 +     63832 CTCT--A---------------------------TAAA
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 1
s Piliocolobus_badius.k141_1234363                           38287  9 +     62158 CTGT--A---------------------------TAGA
i Piliocolobus_badius.k141_1234363                       C 0 I 1
s Piliocolobus_gordonorum.k141_381342                        33014  9 +     89929 CTGT--A---------------------------TAGA
i Piliocolobus_gordonorum.k141_381342                    C 0 I 1
s Piliocolobus_kirkii.k141_448987                            34430  9 +     51399 CTGT--A---------------------------TAGA
i Piliocolobus_kirkii.k141_448987                        C 0 I 1
s Piliocolobus_tephrosceles.PDMG02000141.1                14290651  9 -  14605196 CTGT--A---------------------------TAGA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 1
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              390  9 +     22620 ATCT--A---------------------------TAAA
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 1
s Platanista_gangetica.PlaMin_flattened_line_32310           34144  9 +     35617 CTCT--A---------------------------TAAG
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 I 1
s Pongo_abelii.CM009266.2                                189125499  9 + 189387572 CTCT--A---------------------------TAAA
i Pongo_abelii.CM009266.2                                I 68 I 1
s Pongo_pygmaeus.ctg66                                     9565035  9 +   9816681 CTCT--A---------------------------CAAA
i Pongo_pygmaeus.ctg66                                   T 274 I 68
s Presbytis_comata.k141_677006                               67931  9 -     81375 CTGT--A---------------------------TAGA
i Presbytis_comata.k141_677006                           C 0 I 1
s Presbytis_mitrata.k141_2342859                              9758  9 +     10147 CTGT--A---------------------------TAGA
i Presbytis_mitrata.k141_2342859                         C 0 I 1
s Procavia_capensis.ProCapCap_scaffold_85530                  9952  9 -     22811 CTCT--G---------------------------TGAA
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 I 1
s Propithecus_coquerelli.NW_012148875.1                     986331  4 +   2598838 ----------------------------------TAAA
i Propithecus_coquerelli.NW_012148875.1                  I 2 I 1
s Propithecus_coronatus.k141_347390                          24620  4 +     38485 ----------------------------------TAAA
i Propithecus_coronatus.k141_347390                      I 2 I 1
s Propithecus_diadema.k141_357118                              781  4 +      4256 ----------------------------------TAAA
i Propithecus_diadema.k141_357118                        I 2 I 1
s Propithecus_edwardsi.k141_1176054                          22139  4 +     35766 ----------------------------------TAAA
i Propithecus_edwardsi.k141_1176054                      I 2 I 1
s Propithecus_perrieri.k141_1200571                            322  4 -     24134 ----------------------------------TAAA
i Propithecus_perrieri.k141_1200571                      I 2 I 1
s Propithecus_tattersalli.k141_790011                        24134  4 -     67325 ----------------------------------TAAA
i Propithecus_tattersalli.k141_790011                    I 2 I 1
s Propithecus_verreauxi.k141_956661                            379  4 -      6182 ----------------------------------TAAA
i Propithecus_verreauxi.k141_956661                      I 2 I 1
s Pteronotus_parnellii.KE909381.1                            11158  9 -     21811 CTCC--A---------------------------TCAA
i Pteronotus_parnellii.KE909381.1                        C 0 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36627  9 +     42204 CTCC--A---------------------------CAAA
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 1
s Pteropus_alecto.KB030862.1                              22973635  9 +  28871421 CTCT--A---------------------------TAAA
i Pteropus_alecto.KB030862.1                             C 0 I 1
s Pteropus_vampyrus.KN534172.1                                1572  9 -      8028 CTCT--A---------------------------TAAA
i Pteropus_vampyrus.KN534172.1                           C 0 I 1
s Puma_concolor.QAVW01001104.1                            20270258  9 -  38429054 CTCT--A---------------------------CTAA
i Puma_concolor.QAVW01001104.1                           C 0 I 1
s Pygathrix_cinerea.k141_1153803                              9760  9 -     91421 CTGT--A---------------------------TAGA
i Pygathrix_cinerea.k141_1153803                         C 0 I 1
s Pygathrix_nigripes_b.ctg100                                 7603894  9 +   7812017 CTGT--A---------------------------TAGA
i Pygathrix_nigripes_b.ctg100                               C 0 I 1
s Pygathrix_nigripes_a.k141_215492                              9733  9 -     72585 CTGT--A---------------------------TAGA
i Pygathrix_nigripes_a.k141_215492                         C 0 I 1
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4852  5 +     55207 CTCT--A-------------------------------
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 4
s Rhinolophus_sinicus.LVEH01000134.1                        366869  9 -   3329780 CTCT--A---------------------------CAAA
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 1
s Rhinopithecus_bieti.k119_217274                             1146  9 -     11128 CTGT--A---------------------------TAGA
i Rhinopithecus_bieti.k119_217274                        C 0 I 1
s Rhinopithecus_roxellana.NC_044550.1                     91230523  9 - 195417433 CTGT--A---------------------------TAGA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 1
s Rhinopithecus_strykeri.ctg102                            7666231  9 +   7961872 CTGT--A---------------------------TAGA
i Rhinopithecus_strykeri.ctg102                          C 0 I 1
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84621  9 -     96226 CTCT--A---------------------------TAAA
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 1
s Saiga_tatarica.SaiTat_scaffold_373180                       3504  9 +      4321 CTCT--A---------------------------CAAC
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 I 1
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151349  9 -    313613 CTCT--A---------------------------GAAA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 1
s Semnopithecus_entellus.k141_11662                          14275  9 -     19888 CTGT--A---------------------------TAGA
i Semnopithecus_entellus.k141_11662                      C 0 I 1
s Semnopithecus_hypoleucos.k141_1615806                      21480  9 +     39453 CTGT--A---------------------------TAGA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 I 1
s Semnopithecus_johnii.k141_670120                            2004  9 +     27826 CTGT--A---------------------------TAGA
i Semnopithecus_johnii.k141_670120                       C 0 I 1
s Semnopithecus_priam.k141_638794                             1526  9 -     19483 CTGT--A---------------------------TAGA
i Semnopithecus_priam.k141_638794                        C 0 I 1
s Semnopithecus_schistaceus.k141_1584426                      1588  9 +      7198 CTGT--A---------------------------TAGA
i Semnopithecus_schistaceus.k141_1584426                 C 0 I 1
s Semnopithecus_vetulus.k141_1200928                          9848  9 +     15514 CTGT--A---------------------------TAGA
i Semnopithecus_vetulus.k141_1200928                     C 0 I 1
s Solenodon_paradoxus.SolPar_flattened_line_5840            187641  9 -    191337 CTCC--A---------------------------TAAA
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 I 1
s Sorex_araneus.JH798187.1                                13646980 11 -  18376816 AACCTCA---------------------------TACA
i Sorex_araneus.JH798187.1                               I 1 I 1
s Spermophilus_dauricus.KZ294078.1                         1948180  7 -   3870691 ATCT--A---------------------------TA--
i Spermophilus_dauricus.KZ294078.1                       C 0 I 3
s Spilogale_gracilis.SpiGra_flattened_line_13525             27169  9 +     97271 CTCT--A---------------------------CGAA
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 1
s Suricata_suricatta.SurSur_flattened_line_6629              14176  9 -    196729 CTCT--A---------------------------CTAA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 1
s Sus_scrofa.CM000828.4                                   62882423  7 -  69701581 GTCT--A---------------------------CA--
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1087824  9 -   1523678 CTCT--A---------------------------CAAA
i Symphalangus_syndactylus.tarseq_199                    T 207 I 1
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6773  9 +     41958 CTCT--A---------------------------TAAA
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 1
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69418  9 +    116680 CATG--A---------------------------TAAT
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 I 1
s Tapirus_indicus.TapInd_scaffold_9301                      115156  9 -    156842 CTCT--A---------------------------TGAA
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 1
s Tapirus_terrestris.TapTer_scaffold_755                    383611  9 +    539355 CTCT--A---------------------------TAAA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 1
s Tarsius_lariang.k141_2201908                               10605  9 +     70052 TTCA--A---------------------------CAAA
i Tarsius_lariang.k141_2201908                           C 0 I 1
s Tarsius_wallacei.k141_780063                               14910  9 +     25099 TTCA--A---------------------------CAAA
i Tarsius_wallacei.k141_780063                           C 0 I 1
s Theropithecus_gelada.CM009954.1                        186422854  9 + 186847797 CTGT--A---------------------------TAGA
i Theropithecus_gelada.CM009954.1                        C 0 I 1
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103137  7 +    114563 CTCT--A---------------------------TA--
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 3
s Tolypeutes_matacus.TolMat_scaffold_228639                   1806  9 +      8208 CATG--G---------------------------TAAA
i Tolypeutes_matacus.TolMat_scaffold_228639              T 68 I 1
s Tonatia_saurophila.TonSau_scaffold_294                     78914  9 +    610378 CTCC--A---------------------------TCAA
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 1
s Trachypithecus_auratus.k141_722599                          5585  9 -     20410 CTGT--A---------------------------TAGA
i Trachypithecus_auratus.k141_722599                     C 0 I 1
s Trachypithecus_crepusculus.k141_1194022                     9777  9 +     15221 CTGT--A---------------------------TAGA
i Trachypithecus_crepusculus.k141_1194022                C 0 I 1
s Trachypithecus_cristatus.k141_580354                        5685  9 +     19930 CTGT--A---------------------------TAGA
i Trachypithecus_cristatus.k141_580354                   C 0 I 1
s Trachypithecus_francoisi.k141_1412647                       2112  9 -     19997 CTGT--A---------------------------TAGA
i Trachypithecus_francoisi.k141_1412647                  C 0 I 1
s Trachypithecus_geei.k141_277701                            42231  9 -     60166 CTGT--A---------------------------TAGA
i Trachypithecus_geei.k141_277701                        C 0 I 1
s Trachypithecus_germaini.k141_912491                         9703  9 -     27529 CTGT--A---------------------------TAGA
i Trachypithecus_germaini.k141_912491                    C 0 I 1
s Trachypithecus_hatinhensis.k141_143409                      9643  9 -     18194 CTGT--A---------------------------TAGA
i Trachypithecus_hatinhensis.k141_143409                 C 0 I 1
s Trachypithecus_laotum.k141_907409                           3379  9 -     21137 CTGT--A---------------------------TAGA
i Trachypithecus_laotum.k141_907409                      C 0 I 1
s Trachypithecus_leucocephalus.k141_587342                    2081  9 -     10723 CTGT--A---------------------------TAGA
i Trachypithecus_leucocephalus.k141_587342               C 0 I 1
s Trachypithecus_melamera.k141_434728                         1234  9 +      9834 CTGT--A---------------------------TAGA
i Trachypithecus_melamera.k141_434728                    C 0 I 1
s Trachypithecus_obscurus.k141_190785                        19552  9 +     32220 CTGT--A---------------------------TAGA
i Trachypithecus_obscurus.k141_190785                    C 0 I 1
s Trachypithecus_phayrei.ctg124                            5933649  9 +   6242583 CTGT--A---------------------------TAGA
i Trachypithecus_phayrei.ctg124                          C 0 I 1
s Trachypithecus_pileatus.k141_2007326                        2894  9 +     20839 CTGT--A---------------------------TAGA
i Trachypithecus_pileatus.k141_2007326                   C 0 I 1
s Tragulus_javanicus.TraJav_scaffold_124071                   1052  5 -      2171 CTAC--A-------------------------------
i Tragulus_javanicus.TraJav_scaffold_124071              I 217 I 486
s Tupaia_chinensis.KB320699.1                              2149568  9 +   4065304 CTCC--A---------------------------TGAA
i Tupaia_chinensis.KB320699.1                            C 0 I 1
s Tupaia_tana.TupTan_flattened_line_97126                     3160  9 -     10553 CTCT--G---------------------------TGAA
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737638  9 +  33153633 CTCT--A---------------------------TAAA
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 1
s Uropsilus_gracilis.UroGra_scaffold_12083                   51482  9 -     77625 CACT--G---------------------------GAAA
i Uropsilus_gracilis.UroGra_scaffold_12083               I 56 I 84
s Ursus_maritimus.KK499267.1                               4846870  9 -   5085361 CTCT--A---------------------------CAAA
i Ursus_maritimus.KK499267.1                             C 0 I 1
s Vicugna_pacos.KN270157.1                                 5368342  9 -   5488506 CACC--G---------------------------TAAC
i Vicugna_pacos.KN270157.1                               C 0 I 1
s Vulpes_lagopus.VulLag_flattened_line_30954                  7347  9 -     43706 CTCT--A---------------------------CAAA
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 1
s Xerus_inauris.XerIna_scaffold_48378                        19675  7 -     24430 CTCT--A---------------------------TA--
i Xerus_inauris.XerIna_scaffold_48378                    C 0 I 3
s Zalophus_californianus.ZalCal_flattened_line_63728          1795  9 +      2932 CTCT--A---------------------------CAAA
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 I 1
s Zapus_hudsonius.ZapHud_scaffold_11398                       9952  7 +     63895 TTCA--A---------------------------TT--
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 3
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11330  9 +     12536 CTCT--A---------------------------TAAA
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 I 1
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    15418  9 -    145209 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                         6739  5 -    207569 I
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1287 1 +     62944 T
s Gorilla_beringei.k141_3596273                              10519 1 -     32273 T
i Gorilla_beringei.k141_3596273                          I 140 T 140
s Gorilla_gorilla.LT578341.1                             186332669 1 + 186649187 T
i Gorilla_gorilla.LT578341.1                             I 140 T 140
s Pan_troglodytes.CM009242.2                             189137532 1 + 189151597 t
i Pan_troglodytes.CM009242.2                             I 209 T 209
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Loris_tardigradus.ctg83                                   999493 1 +   6120653 I
e Loris_lydekkerianus.k141_2539221                             657 1 +     11245 I
e Perodicticus_potto.k141_1092580                             3006 1 +     25941 I
e Perodicticus_ibeanus.k141_855320                            4638 1 +     13100 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            11339 1 +     12536 I
e Zapus_hudsonius.ZapHud_scaffold_11398                       9959 3 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_63728          1804 1 +      2932 I
e Xerus_inauris.XerIna_scaffold_48378                        19682 3 -     24430 I
e Vulpes_lagopus.VulLag_flattened_line_30954                  7356 1 -     43706 I
e Vicugna_pacos.KN270157.1                                 5368351 1 -   5488506 I
e Varecia_variegata.k141_1128296                              7155 0 +     24756 C
e Varecia_rubra.k141_590885                                   7107 0 +     50397 C
e Ursus_maritimus.KK499267.1                               4846879 1 -   5085361 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   51491 84 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15737647 1 +  33153633 I
e Tupaia_tana.TupTan_flattened_line_97126                     3169 0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2149577 1 +   4065304 I
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_124071                   1057 486 -      2171 I
e Trachypithecus_pileatus.k141_2007326                        2903 1 +     20839 I
e Trachypithecus_phayrei.ctg124                            5933658 1 +   6242583 I
e Trachypithecus_obscurus.k141_190785                        19561 1 +     32220 I
e Trachypithecus_melamera.k141_434728                         1243 1 +      9834 I
e Trachypithecus_leucocephalus.k141_587342                    2090 1 -     10723 I
e Trachypithecus_laotum.k141_907409                           3388 1 -     21137 I
e Trachypithecus_hatinhensis.k141_143409                      9652 1 -     18194 I
e Trachypithecus_germaini.k141_912491                         9712 1 -     27529 I
e Trachypithecus_geei.k141_277701                            42240 1 -     60166 I
e Trachypithecus_francoisi.k141_1412647                       2121 1 -     19997 I
e Trachypithecus_cristatus.k141_580354                        5694 1 +     19930 I
e Trachypithecus_crepusculus.k141_1194022                     9786 1 +     15221 I
e Trachypithecus_auratus.k141_722599                          5594 1 -     20410 I
e Tonatia_saurophila.TonSau_scaffold_294                     78923 1 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   1815 1 +      8208 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103144 3 +    114563 I
e Theropithecus_gelada.CM009954.1                        186422863 1 + 186847797 I
e Tarsius_wallacei.k141_780063                               14919 1 +     25099 I
e Tarsius_lariang.k141_2201908                               10614 1 +     70052 I
e Tapirus_terrestris.TapTer_scaffold_755                    383620 1 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      115165 1 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 69427 1 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                 6782 1 +     41958 I
e Symphalangus_syndactylus.tarseq_199                      1087833 1 -   1523678 I
e Sus_scrofa.CM000828.4                                   62882430 0 -  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629              14185 1 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             27178 1 +     97271 I
e Spermophilus_dauricus.KZ294078.1                         1948187 3 -   3870691 I
e Sorex_araneus.JH798187.1                                13646991 1 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_5840            187650 1 -    191337 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Semnopithecus_vetulus.k141_1200928                          9857 1 +     15514 I
e Semnopithecus_schistaceus.k141_1584426                      1597 1 +      7198 I
e Semnopithecus_priam.k141_638794                             1535 1 -     19483 I
e Semnopithecus_johnii.k141_670120                            2013 1 +     27826 I
e Semnopithecus_hypoleucos.k141_1615806                      21489 1 +     39453 I
e Semnopithecus_entellus.k141_11662                          14284 1 -     19888 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    151358 1 -    313613 I
e Saiga_tatarica.SaiTat_scaffold_373180                       3513 1 +      4321 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                84630 1 -     96226 I
e Rhinopithecus_strykeri.ctg102                            7666240 1 +   7961872 I
e Rhinopithecus_roxellana.NC_044550.1                     91230532 1 - 195417433 I
e Rhinopithecus_bieti.k119_217274                             1155 1 -     11128 I
e Rhinolophus_sinicus.LVEH01000134.1                        366878 1 -   3329780 I
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4857 4 +     55207 I
e Pygathrix_nigripes_a.k141_215492                              9742 1 -     72585 I
e Pygathrix_nigripes_b.ctg100                                 7603903 1 +   7812017 I
e Pygathrix_cinerea.k141_1153803                              9769 1 -     91421 I
e Puma_concolor.QAVW01001104.1                            20270267 1 -  38429054 I
e Pteropus_vampyrus.KN534172.1                                1581 1 -      8028 I
e Pteropus_alecto.KB030862.1                              22973644 1 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         36636 1 +     42204 I
e Pteronotus_parnellii.KE909381.1                            11167 1 -     21811 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Propithecus_verreauxi.k141_956661                            383 1 -      6182 I
e Propithecus_tattersalli.k141_790011                        24138 1 -     67325 I
e Propithecus_perrieri.k141_1200571                            326 1 -     24134 I
e Propithecus_edwardsi.k141_1176054                          22143 1 +     35766 I
e Propithecus_diadema.k141_357118                              785 1 +      4256 I
e Propithecus_coronatus.k141_347390                          24624 1 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     986335 1 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2592414 0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                  9961 1 -     22811 I
e Presbytis_mitrata.k141_2342859                              9767 1 +     10147 I
e Presbytis_comata.k141_677006                               67940 1 -     81375 I
e Pongo_pygmaeus.ctg66                                     9565044 68 +   9816681 I
e Pongo_abelii.CM009266.2                                189125508 1 + 189387572 I
e Platanista_gangetica.PlaMin_flattened_line_32310           34153 1 +     35617 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              399 1 +     22620 I
e Piliocolobus_tephrosceles.PDMG02000141.1                14290660 1 -  14605196 I
e Piliocolobus_kirkii.k141_448987                            34439 1 +     51399 I
e Piliocolobus_gordonorum.k141_381342                        33023 1 +     89929 I
e Piliocolobus_badius.k141_1234363                           38296 1 +     62158 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               8447 1 +     63832 I
e Petromus_typicus.PetTyp_scaffold_42190                     25803 3 -     29689 I
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25316 0 +     32600 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8835 1 -     78924 I
e Papio_ursinus.k141_3428135                                  3440 1 +      9205 I
e Papio_papio.k141_802527                                     3541 1 +     27711 I
e Papio_kindae.k141_1936966                                    255 1 +     41871 I
e Papio_hamadryas.Contig39                                20558317 278 +  20919399 T
e Papio_cynocephalus.k141_4307930                             1512 1 +     20448 I
e Papio_anubis.CM001495.2                                183437354 1 + 183742232 I
e Pantholops_hodgsonii.KE114653.1                          1264325 1 -   2937107 I
e Panthera_tigris.KE722367.1                               4716956 1 -   8748460 I
e Panthera_pardus.KV860321.1                                259809 1 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  147100 1 +    230217 I
e Pan_paniscus.KQ411613.1                                    38567 1 +     80009 I
e Ovis_canadensis.OviCan_scaffold_2572                      173392 1 -    191736 I
e Ovis_aries.CM001607.2                                   17584971 1 +  44047080 I
e Otocyon_megalotis.JAEUCK010005147.1                       458695 1 -    559221 I
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               6798 1 -     18566 I
e Orcinus_orca.KB316932.1                                  2781400 1 -  10937097 I
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144609 4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              500682 1 -   2017862 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1355720 1 +   3988456 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744888 1 + 199412804 I
e Nycticebus_coucang.k141_5327727                             2147 1 +      8486 I
e Nycticebus_bengalensis.LG01                            102574461 1 - 196305487 I
e Nyctereutes_procyonoides.CAJHUB010000658.1               9145941 1 -   9404916 I
e Noctilio_leporinus.NocLep_scaffold_251                    756349 1 +    783361 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5865485 1 +   7148211 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nasalis_larvatus.k141_413338                                9780 1 +     21681 I
e Nannospalax_galili.KL204047.1                            2025466 3 -   3037898 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186065 1 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_28916                        32574 1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902015 1 -   4330536 I
e Myotis_davidii.KB100139.1                                1585806 1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278249 1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               297625 1 -  14710649 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              2304 2 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           5079 1 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   31316 1 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_61429                  27380 1 -     27816 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 137785 1 -    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                    26529 1 -    437263 I
e Mirza_zaza.k141_952172                                      4639 1 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_22144        62393 1 -     63350 I
e Miopithecus_ogouensis.k141_534055                           3767 1 -     28506 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             32929 1 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1849053 1 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                13379 1 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15418 9 -    145209 I
e Microcebus_murinus.CM007674.1                           18283284 1 -  93316391 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3024 1 +     10310 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365              6194 1 +     13704 I
e Megaderma_lyra.MegLyr_scaffold_4542                         6739 5 -    207569 I
e Marmota_marmota.CZRN01000018.1                          33097395 3 -  40650429 I
e Manis_pentadactyla.KN006162.1                              46951 4 -    317179 I
e Manis_javanica.JSZB01003497.1                              15562 4 +    737560 I
e Mandrillus_sphinx.Contig270                               346210 1 +    752769 I
e Mandrillus_leucophaeus.scaffold280                      23932032 1 -  24302211 I
e Macroglossus_sobrinus.MacSob_scaffold_8222                 87521 1 +     94391 I
e Macaca_tonkeana.k141_1498238                               20477 1 -     45290 I
e Macaca_thibetana.k99_7456                                  15680 1 -     15935 I
e Macaca_silenus.Contig273                                  324411 1 -    668171 I
e Macaca_siberu.k141_635500                                   1538 1 -     14993 I
e Macaca_radiata.k141_3680011                                 1737 1 +     20474 I
e Macaca_nigra.k141_1655396                                  74740 1 +     89720 I
e Macaca_nemestrina.KQ007038.1                            25452540 1 -  25927173 I
e Macaca_mulatta.NC_041758.1                             186833979 1 + 187317192 I
e Macaca_maura.k141_2733130                                  18891 1 +     37952 I
e Macaca_leonina.k141_3550399                                10324 1 -     29190 I
e Macaca_fuscata.k119_255327                                   871 1 -     23192 I
e Macaca_fascicularis.k141_814140                            75152 1 -    114318 I
e Macaca_cyclopis.k119_18836                                  7358 1 -     26193 I
e Macaca_assamensis.Contig5                               59670860 1 +  60120075 I
e Macaca_arctoides.k141_2326796                               1600 1 +     40492 I
e Lycaon_pictus.CM007581.1                                17951680 1 -  59628241 I
e Loxodonta_africana.GL010049.1                            4214473 1 -  43346337 I
e Lophocebus_aterrimus.ctg367                              1431415 1 +   1826925 I
e Lipotes_vexillifer.KE559953.1                             267434 1 -    662738 I
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3036063 1 +   3914936 I
e Lepilemur_septentrionalis.k141_185316                      22760 1 +     54090 I
e Lepilemur_ruficaudatus.k141_420445                         31616 1 -     32627 I
e Lepilemur_dorsalis.k141_577674                             24705 1 +     45836 I
e Lepilemur_ankaranensis.k141_596936                          6758 1 -     23766 I
e Lemur_catta.scaffold_24                                 15519761 0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12204 13 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                1623 1 -      3359 I
e Jaculus_jaculus.JH725527.1                               8271325 3 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_48101               22356 1 +     23964 I
e Indri_indri.k141_3655594                                   18124 1 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7514545 3 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      80878 3 +    135385 I
e Hylobates_pileatus_a.tarseq_633                            3330686 1 -  11177569 I
e Hylobates_pileatus_b.LG02                                     189537793 1 - 191637585 I
e Hylobates_klossii.k141_282416                              54141 1 +     67168 I
e Hylobates_agilis.k141_307679                               12136 1 -     15490 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19804 3 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  40580 1 +     55795 I
e Hoolock_leuconedys.ctg274                                    429218 1 +    630532 I
e Hipposideros_galeritus.HipGal_scaffold_29171               39773 2 +     43066 I
e Hipposideros_armiger.JXIK01000431.1                       108332 2 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               111994 2 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 200 1 +       961 I
e Heterocephalus_glaber.JH602082.1                        20659335 3 +  22651954 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17440 1 +     36099 I
e Helogale_parvula.HelPar_flattened_line_2585               238115 1 +    327341 I
e Hapalemur_occidentalis.k141_907772                          9234 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402 0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298 0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517 0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   30039 2 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            30311 2 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_56069               25422 1 +     26054 I
e Galagoides_demidoff.k141_31856                              3165 1 -      3432 I
e Fukomys_damarensis.KN121974.1                             848456 3 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  5478 1 -     36744 I
e Felis_catus_fca126.CM031415.1                           20191953 1 + 205367284 I
e Eulemur_sanfordi.k141_1122526                               9432 0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267 0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247 0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321 0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369 0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369 0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184 0 -     25546 C
e Eulemur_collaris.k141_377015                                2154 0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453 0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             24752 1 -     44125 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           10815 1 +    133382 I
e Erythrocebus_patas.Contig38                             21199890 1 -  21539334 I
e Erinaceus_europaeus.JH835339.1                           3325300 1 -   7059049 I
e Equus_przewalskii.KK951119.1                               29546 1 +    498745 I
e Equus_caballus.CM000403.2                               18527531 1 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1279710 1 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2144025 1 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16325730 1 -  41312741 I
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1088963 1 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       310240 1 +    607251 I
e Eidolon_helvum.KE759718.1                                   7375 1 +     11740 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 31446 3 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  11972 3 +     14536 I
e Dipodomys_ordii.KN672350.1                              18895762 3 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    34232 3 +     67921 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    2443 1 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  669368 1 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8627868 1 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16811139 1 +  35494412 I
e Daubentonia_madagascariensis.ctg71                      12532852 1 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            61027 1 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1189 3 +      3576 I
e Cuniculus_paca.CunPac_flattened_line_231100                 2806 3 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             24198 1 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_287352               342 18 +      4208 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          10456 1 -     20389 I
e Condylura_cristata.JH655891.1                           17545944 1 -  53390261 I
e Colobus_polykomos.k141_906115                              31727 1 +     84244 I
e Colobus_guereza.LG01                                   199944860 1 + 200372422 I
e Colobus_angolensis.KN981557.1                            1905188 1 +   2368649 I
e Choloepus_hoffmanni.KN194906.1                            170213 1 +    839153 I
e Choloepus_didactylus.ChoDid_scaffold_45914                 15114 1 +     19366 I
e Chlorocebus_sabaeus.CM001947.1                         135416659 1 + 135778131 I
e Chlorocebus_pygerythrus.k141_1025673                        9654 1 -     50209 I
e Chlorocebus_aethiops.ctg25                              18423211 1 -  18827391 I
e Chinchilla_lanigera.JH722012.1                           1248454 3 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           12032 1 +     57038 I
e Cheirogaleus_major.k141_333249                             16683 1 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            4757 1 -      6351 I
e Cercopithecus_roloway.k141_3180641                         39742 1 -     41420 I
e Cercopithecus_pogonias.k141_822820                          9248 1 +     17596 I
e Cercopithecus_petaurista.k141_807961                        9272 1 -     27947 I
e Cercopithecus_nictitans.k141_3278028                        1759 1 +      7159 I
e Cercopithecus_neglectus.k141_2526306                       34467 1 -     53127 I
e Cercopithecus_mona.ctg39                                21217347 1 -  21565898 I
e Cercopithecus_albogularis.ctg5                                38811656 1 +  39242232 I
e Cercopithecus_lowei.k141_457449                             9280 1 -     11289 I
e Cercopithecus_hamlyni.k141_187466                           9261 1 -     27936 I
e Cercopithecus_diana.k141_2427854                             926 1 +      9989 I
e Cercopithecus_cephus.k141_1078548                           6573 1 +     29689 I
e Cercopithecus_ascanius.k141_1024104                         3589 1 -     20310 I
e Cercocebus_torquatus.k141_3057011                           3443 1 +     27781 I
e Cercocebus_lunulatus.k141_3846941                           3213 1 +      8260 I
e Cercocebus_chrysogaster.k141_393940                         8794 1 -     19203 I
e Cercocebus_atys.KQ010504.1                               4470245 1 +   4669795 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2553 1 -      3715 I
e Cephalopachus_bancanus.k141_2037105                         4915 1 -      8605 I
e Cavia_tschudii.CavTsc_scaffold_8919                        98557 3 +    143979 I
e Cavia_porcellus.DS562891.1                              18359682 3 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18347422 3 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     89169 1 +    217609 I
e Castor_canadensis.CasCan_scaffold_2074                    133601 3 +    179628 I
e Carollia_perspicillata.CarPer_scaffold_92756                2837 1 -     11696 I
e Carlito_syrichta.NW_007259797.1                           140999 1 -    496798 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18059956 1 -  44709034 I
e Capra_aegagrus.CM003241.1                               18829236 1 +  46296322 I
e Canis_lupus_orion.HG994398.1                            18496741 1 +  63665305 I
e Canis_lupus_familiaris.chr16                            17955440 1 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9031176 1 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    181789 1 -    185531 I
e CanFam4.chr16                                           17795732 1 -  60362399 I
e Camelus_ferus.KB017975.1                                  399602 1 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2331326 1 -   7040546 I
e Camelus_bactrianus.KN276810.1                            9998862 1 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2818411 1 +   4408762 I
e Bos_taurus.CM000203.6                                   18082922 1 +  45695690 I
e Bos_mutus.JH880303.1                                     1124844 1 -   1948126 I
e Bos_indicus.CM003047.1                                  20272284 1 +  48749331 I
e Bison_bison.KN261452.1                                    199079 1 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    26040 1 +     34529 I
e Balaenoptera_bonaerensis.DF707048.1                         1969 1 -     18090 I
e Balaenoptera_acutorostrata.KI537508.1                   15191503 1 +  23207421 I
e Avahi_peyrierasi.k141_1424874                              49889 1 +     85213 I
e Avahi_laniger.k141_765380                                  49264 1 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  2419 1 +     43469 I
e Arctocebus_calabarensis.k141_288239                        14405 1 +     17124 I
e Aplodontia_rufa.AprRuf_scaffold_68852                       7225 3 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             97570 1 -    100397 I
e Anoura_caudifer.AnoCau_scaffold_1412                      183067 1 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          675118 1 -   2318259 I
e Allochrocebus_solatus.k141_166128                            484 1 -     12518 I
e Allochrocebus_preussi.k141_310680                           9327 1 -      9772 I
e Allochrocebus_lhoesti.k141_4309873                          9201 1 -     28001 I
e Allenopithecus_nigroviridis.k141_3361533                    9274 1 -     52922 I
e Allactaga_bullata.AllBul_scaffold_9566                     64945 3 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             75168 1 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9506944 1 -  29979442 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           823253 1 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1288  6 +     62944 G---A---------ATCA
s Acinonyx_jubatus.LLWD01001279.1                           823254 12 -   1699592 T---ATG-CT-GA-ATCG
i Acinonyx_jubatus.LLWD01001279.1                        I 1 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506945 12 -  29979442 T---ATG-CT-Ga-atag
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 1 C 0
s Ailurus_fulgens.LNAC01001112.1                             75169 12 -    347723 T---ATG-CT-GA-ATAG
i Ailurus_fulgens.LNAC01001112.1                         I 1 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64948 12 -     89534 G---ATG-CC-AA-ATTG
i Allactaga_bullata.AllBul_scaffold_9566                 I 3 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9275  6 -     52922 G---A---------ATCA
i Allenopithecus_nigroviridis.k141_3361533               I 1 C 0
s Allochrocebus_lhoesti.k141_4309873                          9202  6 -     28001 G---A---------ATCA
i Allochrocebus_lhoesti.k141_4309873                     I 1 C 0
s Allochrocebus_preussi.k141_310680                           9328  6 -      9772 G---A---------ATCA
i Allochrocebus_preussi.k141_310680                      I 1 C 0
s Allochrocebus_solatus.k141_166128                            485  6 -     12518 G---A---------ATCA
i Allochrocebus_solatus.k141_166128                      I 1 C 0
s Ammotragus_lervia.NIVO01071767.1                          675119 12 -   2318259 C---ACA-CT-GA-ATCA
i Ammotragus_lervia.NIVO01071767.1                       I 1 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183068 12 +    412891 G---ACA-CA-GC-ATCA
i Anoura_caudifer.AnoCau_scaffold_1412                   I 1 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97571 12 -    100397 C---ACA-CT-GA-ATCA
i Antilocapra_americana.AntAmePen_scaffold_12469         I 1 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7228 12 +     20879 G---ATG-CT-CA-ATTG
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 3 C 0
s Arctocebus_calabarensis.k141_288239                        14406 12 +     17124 G---CTG-TT-GA-ATAG
i Arctocebus_calabarensis.k141_288239                    I 1 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2420 12 +     43469 T---ACA-CA-GC-ATCA
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 1 C 0
s Avahi_laniger.k141_765380                                  49265 12 -     92717 G---GTA-CT-GG-ATCG
i Avahi_laniger.k141_765380                              I 1 C 0
s Avahi_peyrierasi.k141_1424874                              49890 12 +     85213 G---GTA-CT-GG-ATCG
i Avahi_peyrierasi.k141_1424874                          I 1 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191504 12 +  23207421 T---ACA-CT-GA-ATCA
i Balaenoptera_acutorostrata.KI537508.1                  I 1 C 0
s Balaenoptera_bonaerensis.DF707048.1                         1970 12 -     18090 T---ACA-CT-GA-ATCA
i Balaenoptera_bonaerensis.DF707048.1                    I 1 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26041 12 +     34529 C---ACA-CT-GA-ATCA
i Beatragus_hunteri.BeaHun_scaffold_50177                I 1 C 0
s Bison_bison.KN261452.1                                    199080 12 -    288883 C---ACA-CT-GA-ATCA
i Bison_bison.KN261452.1                                 I 1 C 0
s Bos_indicus.CM003047.1                                  20272285 12 +  48749331 C---ACA-CT-GA-NTCA
i Bos_indicus.CM003047.1                                 I 1 C 0
s Bos_mutus.JH880303.1                                     1124845 12 -   1948126 C---ACA-CT-GA-ATCA
i Bos_mutus.JH880303.1                                   I 1 C 0
s Bos_taurus.CM000203.6                                   18082923 12 +  45695690 C---ACA-CT-GA-ATCA
i Bos_taurus.CM000203.6                                  I 1 C 0
s Bubalus_bubalis.KI419123.1                               2818412 12 +   4408762 C---ACA-CT-GA-ATCA
i Bubalus_bubalis.KI419123.1                             I 1 C 0
s Camelus_bactrianus.KN276810.1                            9998863 12 -  17673402 T---ATG-CC-AA-ATCA
i Camelus_bactrianus.KN276810.1                          I 1 C 0
s Camelus_dromedarius.KN272107.1                           2331327 12 -   7040546 T---ATG-CC-AA-ATCA
i Camelus_dromedarius.KN272107.1                         I 1 C 0
s Camelus_ferus.KB017975.1                                  399603 12 -   1652518 T---ATG-CC-AA-ATCA
i Camelus_ferus.KB017975.1                               I 1 C 0
s CanFam4.chr16                                           17795733 12 -  60362399 T---ATG-CT-CA-ATTG
i CanFam4.chr16                                          I 1 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181790 12 -    185531 T---ATG-CT-CA-ATTG
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 1 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031177 12 -   9314153 T---ATG-CT-CA-ATTG
i Canis_lupus_dingo.QKWQ01000480.1                       I 1 C 0
s Canis_lupus_familiaris.chr16                            17955441 12 -  59632846 T---ATG-CT-CA-ATTG
i Canis_lupus_familiaris.chr16                           I 1 C 0
s Canis_lupus_orion.HG994398.1                            18496742 12 +  63665305 T---ATG-CT-CA-ATTG
i Canis_lupus_orion.HG994398.1                           I 1 C 0
s Capra_aegagrus.CM003241.1                               18829237 12 +  46296322 C---ACA-CT-GA-GCCA
i Capra_aegagrus.CM003241.1                              I 1 C 0
s Capra_hircus.CM004588.1                                 18059957 12 -  44709034 C---ACA-CT-GA-GCCA
i Capra_hircus.CM004588.1                                I 1 C 0
s Carlito_syrichta.NW_007259797.1                           141000 12 -    496798 g---atg-cc-ga-atgg
i Carlito_syrichta.NW_007259797.1                        I 1 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2838 12 -     11696 T---ACA-CA-GC-ATCA
i Carollia_perspicillata.CarPer_scaffold_92756           I 1 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133604 12 +    179628 A---ATG-CT-GA-GTTG
i Castor_canadensis.CasCan_scaffold_2074                 I 3 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89170 12 +    217609 T---ACA-CT-GG-AATG
i Catagonus_wagneri.CatWag_scaffold_2839                 I 1 I 41
s Cavia_aperea.AVPZ01000300.1                             18347425 11 -  23392119 T---A-G-CT-AA-CTTG
i Cavia_aperea.AVPZ01000300.1                            I 3 C 0
s Cavia_porcellus.DS562891.1                              18359685 11 -  23407841 T---A-G-CT-AA-CTTG
i Cavia_porcellus.DS562891.1                             I 3 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98560 11 +    143979 T---A-G-CT-AA-CTTG
i Cavia_tschudii.CavTsc_scaffold_8919                    I 3 C 0
s Cephalopachus_bancanus.k141_2037105                         4916 12 -      8605 G---ATG-CC-GA-ATGG
i Cephalopachus_bancanus.k141_2037105                    I 1 C 0
s Ceratotherium_simum.JH767749.1                          12227836 12 +  27778364 T---ACA-CC-GA-atca
i Ceratotherium_simum.JH767749.1                         I 1 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2554 12 -      3715 T---ACA-CC-GA-ATCA
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     I 1 C 0
s Cercocebus_atys.KQ010504.1                               4470246  6 +   4669795 G---A---------ATCA
i Cercocebus_atys.KQ010504.1                             I 1 C 0
s Cercocebus_chrysogaster.k141_393940                         8795  6 -     19203 G---A---------ATCA
i Cercocebus_chrysogaster.k141_393940                    I 1 C 0
s Cercocebus_lunulatus.k141_3846941                           3214  6 +      8260 G---A---------ATCA
i Cercocebus_lunulatus.k141_3846941                      I 1 C 0
s Cercocebus_torquatus.k141_3057011                           3444  6 +     27781 G---A---------ATCA
i Cercocebus_torquatus.k141_3057011                      I 1 C 0
s Cercopithecus_ascanius.k141_1024104                         3590  6 -     20310 G---A---------ATCA
i Cercopithecus_ascanius.k141_1024104                    I 1 C 0
s Cercopithecus_cephus.k141_1078548                           6574  6 +     29689 G---A---------ATCA
i Cercopithecus_cephus.k141_1078548                      I 1 C 0
s Cercopithecus_diana.k141_2427854                             927  6 +      9989 G---A---------ATCA
i Cercopithecus_diana.k141_2427854                       I 1 C 0
s Cercopithecus_hamlyni.k141_187466                           9262  6 -     27936 G---A---------ATCA
i Cercopithecus_hamlyni.k141_187466                      I 1 C 0
s Cercopithecus_lowei.k141_457449                             9281  6 -     11289 G---A---------ATCA
i Cercopithecus_lowei.k141_457449                        I 1 C 0
s Cercopithecus_albogularis.ctg5                                38811657  6 +  39242232 G---A---------ATCA
i Cercopithecus_albogularis.ctg5                               I 1 C 0
s Cercopithecus_mona.ctg39                                21217348  6 -  21565898 G---A---------ATCA
i Cercopithecus_mona.ctg39                               I 1 C 0
s Cercopithecus_neglectus.k141_2526306                       34468  6 -     53127 G---A---------ATCA
i Cercopithecus_neglectus.k141_2526306                   I 1 C 0
s Cercopithecus_nictitans.k141_3278028                        1760  6 +      7159 G---A---------ATCA
i Cercopithecus_nictitans.k141_3278028                   I 1 C 0
s Cercopithecus_petaurista.k141_807961                        9273  6 -     27947 G---A---------ATCA
i Cercopithecus_petaurista.k141_807961                   I 1 C 0
s Cercopithecus_pogonias.k141_822820                          9249  6 +     17596 G---A---------ATCA
i Cercopithecus_pogonias.k141_822820                     I 1 C 0
s Cercopithecus_roloway.k141_3180641                         39743  6 -     41420 G---A---------ATCA
i Cercopithecus_roloway.k141_3180641                     I 1 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4758 12 -      6351 G---ATG-CT-GA-ATCA
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       I 1 C 0
s Cheirogaleus_major.k141_333249                             16684 11 -     52598 G---GTG-CT-GA-ACT-
i Cheirogaleus_major.k141_333249                         I 1 C 0
s Cheirogaleus_medius.k141_1055463                           12033 11 +     57038 G---GTG-CT-GA-ACT-
i Cheirogaleus_medius.k141_1055463                       I 1 C 0
s Chinchilla_lanigera.JH722012.1                           1248457 12 +   2543920 G---ATG-CT-AA-ATTG
i Chinchilla_lanigera.JH722012.1                         I 3 C 0
s Chlorocebus_aethiops.ctg25                              18423212  6 -  18827391 G---A---------ATCA
i Chlorocebus_aethiops.ctg25                             I 1 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9655  6 -     50209 G---A---------ATCA
i Chlorocebus_pygerythrus.k141_1025673                   I 1 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416660  6 + 135778131 G---A---------ATCA
i Chlorocebus_sabaeus.CM001947.1                         I 1 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15115 12 +     19366 G---ATG-CT-GA-ATCA
i Choloepus_didactylus.ChoDid_scaffold_45914             I 1 C 0
s Choloepus_hoffmanni.KN194906.1                            170214 12 +    839153 G---ATG-CT-GA-atca
i Choloepus_hoffmanni.KN194906.1                         I 1 C 0
s Colobus_angolensis.KN981557.1                            1905189  6 +   2368649 G---A---------ATCG
i Colobus_angolensis.KN981557.1                          I 1 C 0
s Colobus_guereza.LG01                                   199944861  6 + 200372422 G---A---------ATCG
i Colobus_guereza.LG01                                   I 1 C 0
s Colobus_polykomos.k141_906115                              31728  6 +     84244 G---A---------ATCG
i Colobus_polykomos.k141_906115                          I 1 C 0
s Condylura_cristata.JH655891.1                           17545945 12 -  53390261 T---ATG-CT-GC-ATCA
i Condylura_cristata.JH655891.1                          I 1 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10457 12 -     20389 T---AAG-CA-GA-ATCA
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 1 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24199 12 -     87169 T---ATG-CT-GA-ATCG
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 1 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2809 12 +      5455 G---ATG-CT-AA-ATTG
i Cuniculus_paca.CunPac_flattened_line_231100            I 3 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1192 12 +      3576 G---ATG-CT-AA-ATTG
i Dasyprocta_punctata.DasPun_flattened_line_206793       I 3 C 0
s Dasypus_novemcinctus.JH564415.1                            61028 12 +   2246927 G---ATG-CC-GA-atca
i Dasypus_novemcinctus.JH564415.1                        I 1 C 0
s Daubentonia_madagascariensis.ctg71                      12532853 12 -  12879189 G---GTG-TT-GA-ACTG
i Daubentonia_madagascariensis.ctg71                     I 1 C 0
s Delphinapterus_leucas.KZ290073.1                        16811140 12 +  35494412 T---ACG-CC-GA-ATCA
i Delphinapterus_leucas.KZ290073.1                       I 1 C 0
s Desmodus_rotundus.KZ672289.1                             8627869 12 +  20541912 T---A-GACA-GC-ATCA
i Desmodus_rotundus.KZ672289.1                           I 1 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669369 12 +   1390856 T---ACA-CT-GA-ATCG
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 1 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2444 12 +    198055 T---ACA-CC-GA-ATCA
i Diceros_bicornis.DicBicMic_scaffold_5955               I 1 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34235 12 +     67921 G---ATG-CT-AA-ATTG
i Dinomys_branickii.DinBra_scaffold_21862                I 3 C 0
s Dipodomys_ordii.KN672350.1                              18895765 12 +  37912305 g---ttt-ct-cC-ATTG
i Dipodomys_ordii.KN672350.1                             I 3 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  11975 12 +     14536 G---TTT-CT-TC-ATTG
i Dipodomys_stephensi.DipSte_scaffold_75855              I 3 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31449 12 -     42551 T---ATG-CT-AA-ATTG
i Dolichotis_patagonum.DolPat_scaffold_30833             I 3 C 0
s Eidolon_helvum.KE759718.1                                   7376 11 +     11740 T---A-C-CA-GA-AGCA
i Eidolon_helvum.KE759718.1                              I 1 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310241 12 +    607251 C---ACA-CT-GA-ATCA
i Elaphurus_davidianus.JRFZ01104969.1                    I 1 C 0
s Elephantulus_edwardii.JH947257.1                         1088964 12 +  10337057 G---GTA-CT-GA-AGTG
i Elephantulus_edwardii.JH947257.1                       I 1 C 0
s Enhydra_lutris.KZ291758.1                               16325731 12 -  41312741 T---ATG-CT-CA-GTCG
i Enhydra_lutris.KZ291758.1                              I 1 C 0
s Eptesicus_fuscus.JH977646.1                              2144026 12 -  14770903 T---ACA-CA-GA-ATCA
i Eptesicus_fuscus.JH977646.1                            I 1 C 0
s Equus_asinus.JREZ01000139.1                              1279711 12 +   4378816 T---ACA-CT-GA-ATCA
i Equus_asinus.JREZ01000139.1                            I 1 C 0
s Equus_caballus.CM000403.2                               18527532 12 -  39960074 T---ACA-CT-GA-ATCA
i Equus_caballus.CM000403.2                              I 1 C 0
s Equus_przewalskii.KK951119.1                               29547 12 +    498745 T---ACA-CT-GA-ATCA
i Equus_przewalskii.KK951119.1                           I 1 C 0
s Erinaceus_europaeus.JH835339.1                           3325301 12 -   7059049 T---ATG-CT-GA-ATAA
i Erinaceus_europaeus.JH835339.1                         I 1 C 0
s Erythrocebus_patas.Contig38                             21199891  6 -  21539334 G---A---------ATCA
i Erythrocebus_patas.Contig38                            I 1 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10816 12 +    133382 T---ACA-CT-GA-ATCA
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 1 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24753 12 -     44125 T---ACA-CT-GA-ATCA
i Eubalaena_japonica.EubJap_flattened_line_31514         I 1 C 0
s Felis_catus.AANG03299807.1                                   376 12 -       507 T---ATG-CT-GA-ATCG
i Felis_catus.AANG03299807.1                             I 1 C 0
s Felis_catus_fca126.CM031415.1                           20191954 12 + 205367284 T---ATG-CT-GA-ATCG
i Felis_catus_fca126.CM031415.1                          I 1 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  5479 12 -     36744 T---ATG-CT-GA-ATCA
i Felis_nigripes.FelNig_flattened_line_20823             I 1 C 0
s Fukomys_damarensis.KN121974.1                             848459 12 +   3816255 G---ATG-CT-GG-ATTG
i Fukomys_damarensis.KN121974.1                          I 3 C 0
s Galagoides_demidoff.k141_31856                              3166 15 -      3432 gcctata-tt-ca-aaaa
i Galagoides_demidoff.k141_31856                         I 1 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25423 12 +     26054 G---ATG-CT-GA-ACTG
i Galeopterus_variegatus.GalVar_scaffold_56069           I 1 C 0
s Glis_glis.GliGli_scaffold_19807                            30313 12 +     49224 G---ATG-CT-GA-ATTT
i Glis_glis.GliGli_scaffold_19807                        I 2 C 0
s Gorilla_beringei.k141_3596273                              10380  6 -     32273 G---A---------ATCA
i Gorilla_beringei.k141_3596273                          T 140 I 18
s Gorilla_gorilla.LT578341.1                             186332530  6 + 186649187 G---A---------ATCA
i Gorilla_gorilla.LT578341.1                             T 140 I 18
s Graphiurus_murinus.GraMur_scaffold_10447                   30041 12 +     78134 G---ATG-CT-CA-ATTG
i Graphiurus_murinus.GraMur_scaffold_10447               I 2 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238116 12 +    327341 T---ATG-CT-GA-ATCG
i Helogale_parvula.HelPar_flattened_line_2585            I 1 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17441 12 +     36099 C---ACA-CT-GA-ACCA
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 1 C 0
s Heterocephalus_glaber.JH602082.1                        20659338 12 +  22651954 G---ATG-CT-GA-CTTG
i Heterocephalus_glaber.JH602082.1                       I 3 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 201 12 +       961 G---A-C-CTTGC-ATTG
i Heterohyrax_brucei.HetBruBak_scaffold_383740           I 1 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               111996 12 +    128679 T---ACG-CT-GA-ATCG
i Hippopotamus_amphibius.HipAmp_scaffold_9076            I 2 C 0
s Hipposideros_armiger.JXIK01000431.1                       108334 12 +   1711038 T---ATG-CA-GA-ATCA
i Hipposideros_armiger.JXIK01000431.1                    I 2 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39775 12 +     43066 T---ATG-CA-GA-ATCA
i Hipposideros_galeritus.HipGal_scaffold_29171           I 2 C 0
s Hoolock_leuconedys.ctg274                                    429219  6 +    630532 G---A---------ATCA
i Hoolock_leuconedys.ctg274                                 I 1 I 203
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40581 12 +     55795 T---ATG-CT-GA-ATTG
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 1 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19807 12 -    143317 T---CTG-CT-AA-ATTG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 3 C 0
s Hylobates_agilis.k141_307679                               12137  6 -     15490 G---A---------ATCA
i Hylobates_agilis.k141_307679                           I 1 I 205
s Hylobates_klossii.k141_282416                              54142  6 +     67168 G---A---------ATCA
i Hylobates_klossii.k141_282416                          I 1 I 205
s Hylobates_pileatus_b.LG02                                     189537794  6 - 191637585 G---A---------ATCA
i Hylobates_pileatus_b.LG02                                     I 1 I 205
s Hylobates_pileatus_a.tarseq_633                            3330687  6 -  11177569 G---A---------ATCA
i Hylobates_pileatus_a.tarseq_633                          I 1 I 205
s Hystrix_cristata.HysCri_scaffold_5660                      80881 12 +    135385 A---ATG-CT-GC-ATTG
i Hystrix_cristata.HysCri_scaffold_5660                  I 3 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514548 12 -   7955117 G---ATG-CT-GA-ATTg
i Ictidomys_tridecemlineatus.JH393364.1                  I 3 C 0
s Indri_indri.k141_3655594                                   18125 12 +     31101 G---GTG-CT-GG-ATTG
i Indri_indri.k141_3655594                               I 1 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22357 12 +     23964 T---ACG-CT-GA-ATCA
i Inia_geoffrensis.IniGeo_flattened_line_48101           I 1 C 0
s Jaculus_jaculus.JH725527.1                               8271328 12 -   9596543 G---ATG-CC-AA-ATTG
i Jaculus_jaculus.JH725527.1                             I 3 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1624 12 -      3359 T---ACG-CT-GA-ATCA
i Kogia_breviceps.KogBre_flattened_line_192630           I 1 C 0
s Lasiurus_borealis.LasBor_scaffold_50988                    11891 12 +     29960 G---ACA-CA-GA-ATCA
i Lasiurus_borealis.LasBor_scaffold_50988                I 26 I 93
s Lepilemur_ankaranensis.k141_596936                          6759 12 -     23766 G---GTG-CT-GA-ATTG
i Lepilemur_ankaranensis.k141_596936                     I 1 C 0
s Lepilemur_dorsalis.k141_577674                             24706 12 +     45836 G---GTG-CT-GA-ATTG
i Lepilemur_dorsalis.k141_577674                         I 1 C 0
s Lepilemur_ruficaudatus.k141_420445                         31617 12 -     32627 G---GTG-CT-GA-ATTG
i Lepilemur_ruficaudatus.k141_420445                     I 1 C 0
s Lepilemur_septentrionalis.k141_185316                      22761 12 +     54090 G---GTG-CT-GA-ATTG
i Lepilemur_septentrionalis.k141_185316                  I 1 C 0
s Leptonychotes_weddellii.KB714746.1                       3036064 12 +   3914936 T---ATG-CT-ga-attg
i Leptonychotes_weddellii.KB714746.1                     I 1 C 0
s Lipotes_vexillifer.KE559953.1                             267435 12 -    662738 T---ATG-CC-GA-ATCA
i Lipotes_vexillifer.KE559953.1                          I 1 C 0
s Lophocebus_aterrimus.ctg367                              1431416  6 +   1826925 G---A---------ATCA
i Lophocebus_aterrimus.ctg367                            I 1 I 373
s Loris_lydekkerianus.k141_2539221                             658 10 +     11245 G---GTG-TT-GA-AT--
i Loris_lydekkerianus.k141_2539221                       I 1 C 0
s Loris_tardigradus.ctg83                                   999494 10 +   6120653 G---GTG-TT-GA-AT--
i Loris_tardigradus.ctg83                                I 1 C 0
s Loxodonta_africana.GL010049.1                            4214474 12 -  43346337 G---ACA-CT--ACATTG
i Loxodonta_africana.GL010049.1                          I 1 C 0
s Lycaon_pictus.CM007581.1                                17951681 12 -  59628241 T---ATG-CT-CA-ATTG
i Lycaon_pictus.CM007581.1                               I 1 C 0
s Macaca_arctoides.k141_2326796                               1601  6 +     40492 G---A---------ATCA
i Macaca_arctoides.k141_2326796                          I 1 C 0
s Macaca_assamensis.Contig5                               59670861  6 +  60120075 G---A---------ATCA
i Macaca_assamensis.Contig5                              I 1 C 0
s Macaca_cyclopis.k119_18836                                  7359  6 -     26193 G---A---------ATCA
i Macaca_cyclopis.k119_18836                             I 1 C 0
s Macaca_fascicularis.k141_814140                            75153  6 -    114318 G---A---------ATCA
i Macaca_fascicularis.k141_814140                        I 1 C 0
s Macaca_fuscata.k119_255327                                   872  6 -     23192 G---A---------ATCA
i Macaca_fuscata.k119_255327                             I 1 C 0
s Macaca_leonina.k141_3550399                                10325  6 -     29190 G---A---------ATCA
i Macaca_leonina.k141_3550399                            I 1 C 0
s Macaca_maura.k141_2733130                                  18892  6 +     37952 G---A---------ATCA
i Macaca_maura.k141_2733130                              I 1 C 0
s Macaca_mulatta.NC_041758.1                             186833980  6 + 187317192 G---A---------ATCA
i Macaca_mulatta.NC_041758.1                             I 1 C 0
s Macaca_nemestrina.KQ007038.1                            25452541  6 -  25927173 G---A---------ATCA
i Macaca_nemestrina.KQ007038.1                           I 1 C 0
s Macaca_nigra.k141_1655396                                  74741  6 +     89720 G---A---------ATCA
i Macaca_nigra.k141_1655396                              I 1 C 0
s Macaca_radiata.k141_3680011                                 1738  6 +     20474 G---A---------ATCA
i Macaca_radiata.k141_3680011                            I 1 C 0
s Macaca_siberu.k141_635500                                   1539  6 -     14993 G---A---------ATCA
i Macaca_siberu.k141_635500                              I 1 C 0
s Macaca_silenus.Contig273                                  324412  6 -    668171 G---A---------ATCA
i Macaca_silenus.Contig273                               I 1 C 0
s Macaca_thibetana.k99_7456                                  15681  6 -     15935 G---A---------ATCA
i Macaca_thibetana.k99_7456                              I 1 C 0
s Macaca_tonkeana.k141_1498238                               20478  6 -     45290 G---A---------ATCA
i Macaca_tonkeana.k141_1498238                           I 1 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87522 11 +     94391 T---A---CTAGA-AGCA
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 1 C 0
s Mandrillus_leucophaeus.scaffold280                      23932033  6 -  24302211 G---A---------ATCA
i Mandrillus_leucophaeus.scaffold280                     I 1 C 0
s Mandrillus_sphinx.Contig270                               346211  6 +    752769 G---A---------ATCA
i Mandrillus_sphinx.Contig270                            I 1 C 0
s Manis_javanica.JSZB01003497.1                              15566 12 +    737560 T---ATG-Ct-ga-attg
i Manis_javanica.JSZB01003497.1                          I 4 C 0
s Manis_pentadactyla.KN006162.1                              46955 12 -    317179 T---ATG-CT-ga-attg
i Manis_pentadactyla.KN006162.1                          I 4 C 0
s Marmota_marmota.CZRN01000018.1                          33097398 12 -  40650429 G---ATG-CT-GA-atta
i Marmota_marmota.CZRN01000018.1                         I 3 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6744  4 -    207569 --------------ATCA
i Megaderma_lyra.MegLyr_scaffold_4542                    I 5 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6195 12 +     13704 T---ATG-CT-GA-TTCA
i Mellivora_capensis.MelCap_flattened_line_69365         I 1 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3025 12 +     10310 T---ATG-CC-GA-ATCA
i Mesoplodon_bidens.MesBid_scaffold_108144               I 1 C 0
s Microcebus_murinus.CM007674.1                           18283285 12 -  93316391 G---GTG-CT-GA-ATTG
i Microcebus_murinus.CM007674.1                          I 1 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13380 12 -     19307 C---ACA-CA-GC-ATCA
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 1 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849054 12 +   8254450 T---ACa-ca-ga-atca
i Miniopterus_natalensis.LDJU01000034.1                  I 1 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32930 12 +     64694 T---ACA-CA-GA-ATCA
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 1 C 0
s Miopithecus_ogouensis.k141_534055                           3768  6 -     28506 G---A---------ATCA
i Miopithecus_ogouensis.k141_534055                      I 1 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62394 12 -     63350 T---ATG-CT-GA-ATTG
i Mirounga_angustirostris.MirAng_flattened_line_22144    I 1 C 0
s Mirza_zaza.k141_952172                                      4640 12 -     37649 G---GTG-CT-GA-ATTG
i Mirza_zaza.k141_952172                                 I 1 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26530 12 -    437263 T---ACG-CC-GA-ATCA
i Monodon_monoceros.MonMon_M_scaffold_103                I 1 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137786 12 -    366855 T---ATA-CA-GC-ATCA
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 1 C 0
s Moschus_moschiferus.MosMos_scaffold_61429                  27381 12 -     27816 C---ACA-CT-GA-ATCA
i Moschus_moschiferus.MosMos_scaffold_61429              I 1 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31317 12 +     37127 T---ATG-CT-GA-ATCG
i Mungos_mungo.MunMun_flattened_line_23663               I 1 C 0
s Murina_feae.MurFea_scaffold_85699                           5080 12 +     14753 T---ACA-CA-GA-ATCA
i Murina_feae.MurFea_scaffold_85699                      I 1 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2306 12 +     14296 G---GTG-CT-GA-ATTT
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 2 C 0
s Mustela_putorius.JH418006.1                               297626 12 -  14710649 T---ATG-CT-GA-ATCG
i Mustela_putorius.JH418006.1                            I 1 C 0
s Myotis_brandtii.KE162005.1                                278250 12 -  10118263 T---ACA-CA-GA-ATCA
i Myotis_brandtii.KE162005.1                             I 1 C 0
s Myotis_davidii.KB100139.1                                1585807 12 -   6019432 T---ATA-CA-GA-ATCA
i Myotis_davidii.KB100139.1                              I 1 C 0
s Myotis_lucifugus.GL429869.1                              3902016 12 -   4330536 T---ACA-CA-GA-ATCA
i Myotis_lucifugus.GL429869.1                            I 1 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32575 12 +     33610 T---ACA-CA-GA-ATCA
i Myotis_myotis.MyoMyo_scaffold_28916                    I 1 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186066 12 +    196477 G---ATA-CT-GG-ATCA
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 1 C 0
s Nannospalax_galili.KL204047.1                            2025469 12 -   3037898 G---ATG-CT-GA-ATTG
i Nannospalax_galili.KL204047.1                          I 3 C 0
s Nasalis_larvatus.k141_413338                                9781  6 +     21681 G---A---------ATCA
i Nasalis_larvatus.k141_413338                           I 1 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865486 12 +   7148211 T---ACG-CC-GA-ATCA
i Neophocaena_asiaeorientalis.KZ687982.1                 I 1 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756350 12 +    783361 T---ACA-CA-CC-AGCA
i Noctilio_leporinus.NocLep_scaffold_251                 I 1 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145942 12 -   9404916 T---ATG-CT-CA-ATCG
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 1 C 0
s Nycticebus_bengalensis.LG01                            102574462 10 - 196305487 G---GTG-TT-GA-AT--
i Nycticebus_bengalensis.LG01                            I 1 C 0
s Nycticebus_coucang.k141_5327727                             2148 10 +      8486 G---GTG-TT-GA-AT--
i Nycticebus_coucang.k141_5327727                        I 1 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744889 10 + 199412804 G---GTG-TT-GA-AT--
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 1 C 0
s Ochotona_princeps.JH802162.1                             1355721 12 +   3988456 G---ATG-CT-GA-TGTA
i Ochotona_princeps.JH802162.1                           I 1 C 0
s Odobenus_rosmarus.KB229312.1                              500683 12 -   2017862 A---ATG-Ct-ga-atca
i Odobenus_rosmarus.KB229312.1                           I 1 C 0
s Odocoileus_virginianus.KZ100018.1                         144613 12 +    630418 C---ACA-CT-GA-ATCA
i Odocoileus_virginianus.KZ100018.1                      I 4 C 0
s Orcinus_orca.KB316932.1                                  2781401 12 -  10937097 T---ACG-CC-AA-ATCA
i Orcinus_orca.KB316932.1                                I 1 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6799 12 -     18566 G---ATA-TT-GA-AATG
i Orycteropus_afer.OryAfe_flattened_line_144387          I 1 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458696 12 -    559221 T---ATG-CT-CA-ATTG
i Otocyon_megalotis.JAEUCK010005147.1                    I 1 C 0
s Ovis_aries.CM001607.2                                   17584972 12 +  44047080 C---ACA-CT-GA-ACCA
i Ovis_aries.CM001607.2                                  I 1 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173393 12 -    191736 C---ACA-CT-GA-ACCA
i Ovis_canadensis.OviCan_scaffold_2572                   I 1 C 0
s Pan_paniscus.KQ411613.1                                    38568  6 +     80009 g---a---------atca
i Pan_paniscus.KQ411613.1                                I 1 T 2404
s Pan_troglodytes.CM009242.2                             189137324  6 + 189151597 g---a---------atca
i Pan_troglodytes.CM009242.2                             T 209 n 209
s Panthera_onca.PanOnc_flattened_line_3271                  147101 12 +    230217 T---ATG-CT-GT-ATCG
i Panthera_onca.PanOnc_flattened_line_3271               I 1 C 0
s Panthera_pardus.KV860321.1                                259810 12 +  18783137 T---ATG-CT-GT-ATCG
i Panthera_pardus.KV860321.1                             I 1 C 0
s Panthera_tigris.KE722367.1                               4716957 12 -   8748460 T---ATG-CT-GT-ATCG
i Panthera_tigris.KE722367.1                             I 1 C 0
s Pantholops_hodgsonii.KE114653.1                          1264326 12 -   2937107 C---ACA-CT-GA-ATCA
i Pantholops_hodgsonii.KE114653.1                        I 1 C 0
s Papio_anubis.CM001495.2                                183437355  6 + 183742232 G---A---------ATCA
i Papio_anubis.CM001495.2                                I 1 C 0
s Papio_cynocephalus.k141_4307930                             1513  6 +     20448 G---A---------ATCA
i Papio_cynocephalus.k141_4307930                        I 1 C 0
s Papio_hamadryas.Contig39                                20558039  6 +  20919399 G---A---------ATCA
i Papio_hamadryas.Contig39                               T 278 C 0
s Papio_kindae.k141_1936966                                    256  6 +     41871 G---A---------ATCA
i Papio_kindae.k141_1936966                              I 1 C 0
s Papio_papio.k141_802527                                     3542  6 +     27711 G---A---------ATCA
i Papio_papio.k141_802527                                I 1 C 0
s Papio_ursinus.k141_3428135                                  3441  6 +      9205 G---A---------ATCA
i Papio_ursinus.k141_3428135                             I 1 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8836 12 -     78924 T---ATG-CT-GA-ATCG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 1 C 0
s Perodicticus_ibeanus.k141_855320                            4639 12 +     13100 G---CTG-TT-GA-ATCG
i Perodicticus_ibeanus.k141_855320                       I 1 C 0
s Perodicticus_potto.k141_1092580                             3007 12 +     25941 G---CTG-TT-GA-ATCG
i Perodicticus_potto.k141_1092580                        I 1 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25806 12 -     29689 A---ATG-CT-GA-ACTG
i Petromus_typicus.PetTyp_scaffold_42190                 I 3 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8448 12 +     63832 T---ACG-CC-GA-ATCA
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 1 C 0
s Piliocolobus_badius.k141_1234363                           38297  6 +     62158 G---A---------ATCA
i Piliocolobus_badius.k141_1234363                       I 1 C 0
s Piliocolobus_gordonorum.k141_381342                        33024  6 +     89929 G---A---------ATCA
i Piliocolobus_gordonorum.k141_381342                    I 1 C 0
s Piliocolobus_kirkii.k141_448987                            34440  6 +     51399 G---A---------ATCA
i Piliocolobus_kirkii.k141_448987                        I 1 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290661  6 -  14605196 G---A---------ATCA
i Piliocolobus_tephrosceles.PDMG02000141.1               I 1 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              400 12 +     22620 T---ACA-CA-GA-ATCC
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 1 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34154 12 +     35617 T---ATG-CT-GA-ATCA
i Platanista_gangetica.PlaMin_flattened_line_32310       I 1 C 0
s Pongo_abelii.CM009266.2                                189125509  6 + 189387572 G---A---------ATCA
i Pongo_abelii.CM009266.2                                I 1 C 0
s Pongo_pygmaeus.ctg66                                     9565112  6 +   9816681 G---A---------ATCA
i Pongo_pygmaeus.ctg66                                   I 68 C 0
s Presbytis_comata.k141_677006                               67941  6 -     81375 G---A---------ATCA
i Presbytis_comata.k141_677006                           I 1 C 0
s Presbytis_mitrata.k141_2342859                              9768  6 +     10147 G---A---------ATCA
i Presbytis_mitrata.k141_2342859                         I 1 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9962 12 -     22811 G---A-C-CT-TACATTG
i Procavia_capensis.ProCapCap_scaffold_85530             I 1 C 0
s Propithecus_coquerelli.NW_012148875.1                     986336 12 +   2598838 A---GTG-CT-GG-ATTG
i Propithecus_coquerelli.NW_012148875.1                  I 1 C 0
s Propithecus_coronatus.k141_347390                          24625 12 +     38485 G---GTG-CT-GG-ATTG
i Propithecus_coronatus.k141_347390                      I 1 C 0
s Propithecus_diadema.k141_357118                              786 12 +      4256 G---GTG-CT-GG-ATTG
i Propithecus_diadema.k141_357118                        I 1 C 0
s Propithecus_edwardsi.k141_1176054                          22144 12 +     35766 G---GTG-CT-GG-ATTG
i Propithecus_edwardsi.k141_1176054                      I 1 C 0
s Propithecus_perrieri.k141_1200571                            327 12 -     24134 G---GTG-CT-GG-ATTG
i Propithecus_perrieri.k141_1200571                      I 1 C 0
s Propithecus_tattersalli.k141_790011                        24139 12 -     67325 G---GTG-CT-GG-ATTG
i Propithecus_tattersalli.k141_790011                    I 1 C 0
s Propithecus_verreauxi.k141_956661                            384 12 -      6182 G---GTG-CT-GG-ATTG
i Propithecus_verreauxi.k141_956661                      I 1 C 0
s Pteronotus_parnellii.KE909381.1                            11168 12 -     21811 T---ACA-CA-GC-ATCA
i Pteronotus_parnellii.KE909381.1                        I 1 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36637 12 +     42204 T---ATG-CT-GA-ATCG
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 1 C 0
s Pteropus_alecto.KB030862.1                              22973645 11 +  28871421 T---A-C-CA-GA-AGCT
i Pteropus_alecto.KB030862.1                             I 1 C 0
s Pteropus_vampyrus.KN534172.1                                1582 11 -      8028 T---A-C-CA-GA-AGCT
i Pteropus_vampyrus.KN534172.1                           I 1 C 0
s Puma_concolor.QAVW01001104.1                            20270268 12 -  38429054 T---ATG-CT-GA-ATTG
i Puma_concolor.QAVW01001104.1                           I 1 C 0
s Pygathrix_cinerea.k141_1153803                              9770  6 -     91421 G---A---------ATCA
i Pygathrix_cinerea.k141_1153803                         I 1 C 0
s Pygathrix_nigripes_b.ctg100                                 7603904  6 +   7812017 G---A---------ATCA
i Pygathrix_nigripes_b.ctg100                               I 1 C 0
s Pygathrix_nigripes_a.k141_215492                              9743  6 -     72585 G---A---------ATCA
i Pygathrix_nigripes_a.k141_215492                         I 1 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4861 12 +     55207 C---ACA-CT-GA-ATCA
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 4 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        366879 12 -   3329780 T---ACa-ca-ga-atca
i Rhinolophus_sinicus.LVEH01000134.1                     I 1 C 0
s Rhinopithecus_bieti.k119_217274                             1156  6 -     11128 G---G---------ATCA
i Rhinopithecus_bieti.k119_217274                        I 1 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230533  6 - 195417433 G---G---------ATCA
i Rhinopithecus_roxellana.NC_044550.1                    I 1 C 0
s Rhinopithecus_strykeri.ctg102                            7666241  6 +   7961872 G---G---------ATCA
i Rhinopithecus_strykeri.ctg102                          I 1 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84631 11 -     96226 T---A-C-CA-GA-AGCA
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 1 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3514 12 +      4321 C---ACA-CT-GA-ATCA
i Saiga_tatarica.SaiTat_scaffold_373180                  I 1 C 0
s Semnopithecus_entellus.k141_11662                          14285  6 -     19888 G---A---------ATCA
i Semnopithecus_entellus.k141_11662                      I 1 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21490  6 +     39453 G---A---------ATCA
i Semnopithecus_hypoleucos.k141_1615806                  I 1 C 0
s Semnopithecus_johnii.k141_670120                            2014  6 +     27826 G---A---------ATCA
i Semnopithecus_johnii.k141_670120                       I 1 C 0
s Semnopithecus_priam.k141_638794                             1536  6 -     19483 G---A---------ATCA
i Semnopithecus_priam.k141_638794                        I 1 C 0
s Semnopithecus_schistaceus.k141_1584426                      1598  6 +      7198 G---A---------ATCA
i Semnopithecus_schistaceus.k141_1584426                 I 1 C 0
s Semnopithecus_vetulus.k141_1200928                          9858  6 +     15514 G---A---------ATCA
i Semnopithecus_vetulus.k141_1200928                     I 1 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187651 12 -    191337 T---ATG-CT-GA-ATAG
i Solenodon_paradoxus.SolPar_flattened_line_5840         I 1 C 0
s Sorex_araneus.JH798187.1                                13646992  2 -  18376816 T---A-------------
i Sorex_araneus.JH798187.1                               I 1 I 3
s Spermophilus_dauricus.KZ294078.1                         1948190 12 -   3870691 G---ATG-CT-ga-atga
i Spermophilus_dauricus.KZ294078.1                       I 3 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27179 12 +     97271 T---ATG-CT-GA-ACCG
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 1 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14186 12 -    196729 T---ACG-CT-GA-GTCA
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 C 0
s Sus_scrofa.CM000828.4                                   62882430  2 -  69701581 ----------------CA
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1087834  6 -   1523678 G---A---------ATCA
i Symphalangus_syndactylus.tarseq_199                    I 1 I 206
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6783 12 +     41958 T---ACG-C--AACATCA
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 1 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69428 12 +    116680 G---ATA-CT-GG-ATCA
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 1 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115166 12 -    156842 T---ACA-CT-GA-ATCA
i Tapirus_indicus.TapInd_scaffold_9301                   I 1 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383621 12 +    539355 T---ACA-CT-GA-ATCA
i Tapirus_terrestris.TapTer_scaffold_755                 I 1 C 0
s Tarsius_lariang.k141_2201908                               10615 12 +     70052 G---ATG-CC-GA-ATGG
i Tarsius_lariang.k141_2201908                           I 1 C 0
s Tarsius_wallacei.k141_780063                               14920 12 +     25099 G---ATG-CC-GA-ATGG
i Tarsius_wallacei.k141_780063                           I 1 C 0
s Theropithecus_gelada.CM009954.1                        186422864  6 + 186847797 G---A---------ATCA
i Theropithecus_gelada.CM009954.1                        I 1 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103147 12 +    114563 A---ATA-CT-CA-ACTG
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 3 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   1816 12 +      8208 G---ATG-CT-GA-ATCA
i Tolypeutes_matacus.TolMat_scaffold_228639              I 1 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78924 12 +    610378 T---ACA-CA-GC-ATCA
i Tonatia_saurophila.TonSau_scaffold_294                 I 1 C 0
s Trachypithecus_auratus.k141_722599                          5595  6 -     20410 G---A---------ATCA
i Trachypithecus_auratus.k141_722599                     I 1 C 0
s Trachypithecus_crepusculus.k141_1194022                     9787  6 +     15221 G---A---------ATCA
i Trachypithecus_crepusculus.k141_1194022                I 1 C 0
s Trachypithecus_cristatus.k141_580354                        5695  6 +     19930 G---A---------ATCA
i Trachypithecus_cristatus.k141_580354                   I 1 C 0
s Trachypithecus_francoisi.k141_1412647                       2122  6 -     19997 G---A---------ATCA
i Trachypithecus_francoisi.k141_1412647                  I 1 C 0
s Trachypithecus_geei.k141_277701                            42241  6 -     60166 G---A---------ATCA
i Trachypithecus_geei.k141_277701                        I 1 C 0
s Trachypithecus_germaini.k141_912491                         9713  6 -     27529 G---A---------ATCA
i Trachypithecus_germaini.k141_912491                    I 1 C 0
s Trachypithecus_hatinhensis.k141_143409                      9653  6 -     18194 G---A---------ATCA
i Trachypithecus_hatinhensis.k141_143409                 I 1 C 0
s Trachypithecus_laotum.k141_907409                           3389  6 -     21137 G---A---------ATCA
i Trachypithecus_laotum.k141_907409                      I 1 C 0
s Trachypithecus_leucocephalus.k141_587342                    2091  6 -     10723 G---A---------ATCA
i Trachypithecus_leucocephalus.k141_587342               I 1 C 0
s Trachypithecus_melamera.k141_434728                         1244  6 +      9834 G---A---------ATCA
i Trachypithecus_melamera.k141_434728                    I 1 C 0
s Trachypithecus_obscurus.k141_190785                        19562  6 +     32220 G---A---------ATCA
i Trachypithecus_obscurus.k141_190785                    I 1 C 0
s Trachypithecus_phayrei.ctg124                            5933659  6 +   6242583 G---A---------ATCA
i Trachypithecus_phayrei.ctg124                          I 1 C 0
s Trachypithecus_pileatus.k141_2007326                        2904  6 +     20839 G---A---------ATCA
i Trachypithecus_pileatus.k141_2007326                   I 1 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    632 11 -      1748 ----ACA-CT-GA-ATCA
i Tragulus_javanicus.TraJav_scaffold_140459              I 2 C 0
s Tupaia_chinensis.KB320699.1                              2149578 12 +   4065304 G---ACG-CT-GA-ACTG
i Tupaia_chinensis.KB320699.1                            I 1 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     3169 12 -     10553 G---ACG-CT-GA-ACTG
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737648 12 +  33153633 T---ATG-CC-AA-ATCA
i Tursiops_truncatus.MRVK01000835.1                      I 1 C 0
s Uropsilus_gracilis.UroGra_scaffold_97021                    1879 12 -      4736 T---ATG-CT-GA-ATGA
i Uropsilus_gracilis.UroGra_scaffold_97021               I 10 C 0
s Ursus_maritimus.KK499267.1                               4846880 12 -   5085361 T---ATG-CT-GA-ATAG
i Ursus_maritimus.KK499267.1                             I 1 C 0
s Vicugna_pacos.KN270157.1                                 5368352 12 -   5488506 T---ATG-CC-AA-ATCA
i Vicugna_pacos.KN270157.1                               I 1 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7357 12 -     43706 T---ATG-CT-CA-ATCG
i Vulpes_lagopus.VulLag_flattened_line_30954             I 1 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19685 12 -     24430 G---ATG-CC-AA-AGTG
i Xerus_inauris.XerIna_scaffold_48378                    I 3 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1805 12 +      2932 A---ATG-CT-GA-ATCG
i Zalophus_californianus.ZalCal_flattened_line_63728     I 1 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9962 12 +     63895 C---ATG-CC-AA-ATTG
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 3 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11340 12 +     12536 T---ATT-CC-GA-ATCA
i Ziphius_cavirostris.ZipCav_flattened_line_71469        I 1 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    151358  1 -    313613 I
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25316  0 +     32600 C
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    15418  9 -    145209 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Crocidura_indochinensis.CroInd_scaffold_287352               342 18 +      4208 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1294 18 +     62944 CATGAAACG-GAAT-------GGTTC
s Acinonyx_jubatus.LLWD01001279.1                           823266 18 -   1699592 AATGAAATG-GAAT-------TGCCG
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506957 18 -  29979442 aatgaaatg-aaat-------tgctA
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             75181 18 -    347723 GATGAAATG-AAAT-------TGCTA
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64960 15 -     89534 AGTGGGGTA-GAAT-------TA---
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9281 18 -     52922 CATGAAATA-GAAT-------GGTTC
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9208 18 -     28001 CATGAAACA-GAAT-------GGTTC
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9334 18 -      9772 CATGAAATA-GAAT-------GGTTC
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            491 18 -     12518 CATGAAATA-GAAT-------GGTTC
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675131 18 -   2318259 AATAAAGTG-GAAT-------TGTTA
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183080 18 +    412891 CATGAAATA-GACT-------TGTTA
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97583 18 -    100397 AATAAAACA-GAAT-------TGTTA
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7240 15 +     20879 AGCAAAATG-GAAT-------CA---
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14418 18 +     17124 AATAAAATA-GAAT-------TGTTA
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2432 18 +     43469 CATGAAGTA-GAAT-------TGTTA
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  49277 18 -     92717 AATGAAATA-GAAT-------TGCTA
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              49902 18 +     85213 AATGAAATA-GAAT-------TGCTA
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191516 18 +  23207421 AATGAAATG-GAAT-------TGTTA
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         1982 18 -     18090 AATGAAATG-GAAT-------TGTTA
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26053 18 +     34529 AATAAAGTG-GAAT-------TGTTA
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    199092 18 -    288883 AATAAAATG-GAAT-------TGTTA
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20272297 18 +  48749331 AATAAAATG-GAAT-------TGTTA
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1124857 18 -   1948126 AATAAAATG-GAAT-------TGTTA
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18082935 18 +  45695690 AATAAAATG-GAAT-------TGTTA
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2818424 18 +   4408762 AATAAAATG-GAAT-------TGTTA
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998875 18 -  17673402 AATGAAGTG-GAGT-------TGTTA
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331339 18 -   7040546 AATGAAGTG-GAGT-------TGTTA
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399615 18 -   1652518 AATGAAGTG-GAGT-------TGTTA
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795745 18 -  60362399 AATGAAATT-AAAT-------TGCTA
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181802 18 -    185531 AATGAAATT-AAAT-------TGCTA
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031189 18 -   9314153 AATGAAATT-AAAT-------TGCTA
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955453 18 -  59632846 AATGAAATT-AAAT-------TGCTA
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496754 18 +  63665305 AATGAAATT-AAAT-------TGCTA
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18829249 18 +  46296322 AATCAAGTG-GAAT-------TGTTA
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18059969 18 -  44709034 AATCAAGTG-GAAT-------TGTTA
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           141012 18 -    496798 aatgaaata-taat-------tgtTG
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2850 18 -     11696 AATGAAATA-GAAT-------TGTTA
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133616 15 +    179628 AATGCAATG-GAAT-------TG---
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89223 18 +    217609 ACTGGAATG-GAAT-------TGTTG
i Catagonus_wagneri.CatWag_scaffold_2839                 I 41 C 0
s Cavia_aperea.AVPZ01000300.1                             18347436 20 -  23392119 AATGAGATA-GAATCACT-A-TG---
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18359696 20 -  23407841 AATGAGATA-GAATCACT-A-TG---
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98571 20 +    143979 AATGAGATA-GAATCATT-A-TG---
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         4928 18 -      8605 AATGAAATA-TAAT-------TGTTG
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227848 18 +  27778364 aatgaaata-gaat-------tatta
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2566 18 -      3715 AATGAAATA-GAAT-------TATTA
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470252 18 +   4669795 CATGAAATA-GAAT-------GGTTC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8801 18 -     19203 CATGAAATA-GAAT-------GGTTC
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3220 18 +      8260 CATGAAATA-GAAT-------GGTTC
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3450 18 +     27781 CATGAAATA-GAAT-------GGTTC
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3596 18 -     20310 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6580 18 +     29689 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             933 18 +      9989 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9268 18 -     27936 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9287 18 -     11289 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811663 18 +  39242232 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217354 18 -  21565898 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34474 18 -     53127 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1766 18 +      7159 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9279 18 -     27947 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9255 18 +     17596 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39749 18 -     41420 CATGAAATA-GAAT-------GGTTC
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4770 18 -      6351 GATGCAATG-AAAT-------TGCTG
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16695 18 -     52598 AATGAAACA-GAAT-------TGATA
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12044 18 +     57038 AATGAAATA-GAAT-------TGATA
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1248469 17 +   2543920 AATGAAATA-GAATGA-T----A---
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18423218 18 -  18827391 CATGAAACA-GAAT-------GGTTC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9661 18 -     50209 CATGAAACA-GAAT-------GGTTC
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416666 18 + 135778131 CATGAAATA-GAAT-------GGTTC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15127 18 +     19366 AATGGAATA-GAAT-------TGCTA
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170226 18 +    839153 aatggaata-gaat-------tgctA
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1905195 18 +   2368649 CATGAAATA-GAGT-------GGCCC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944867 16 + 200372422 CATGAAATA-G--T-------GGCTC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31734 18 +     84244 CATGAAATA-GAGT-------GGCCC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545957 18 -  53390261 AATGAAATG-GAAT-------TGCTG
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10469 15 -     20389 AGTGAAATG-AAAT-------TG---
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_109268              7529 13 +      9948 ---AAAGTA-TC---------TATGA
i Crocidura_indochinensis.CroInd_scaffold_109268         T 17 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24211 18 -     87169 AATGAAATG-GAAT-------TCCTA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2821 20 +      5455 AATGAAACA-GAATCA-TGA-TG---
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1204 20 +      3576 AATGAAATA-GAATCATT-A-CA---
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            61040 18 +   2246927 aatggaata-aaat-------tgctA
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532865 18 -  12879189 AATGAAAAA-GAAT-------TGTTA
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811152 18 +  35494412 AATGAAATG-GAAT-------TGTTA
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8627881 18 +  20541912 AATGAAATA-GAAT-------TGTTG
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669381 18 +   1390856 AATGAAATA-GAAT-------TATTA
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2456 18 +    198055 AATGAAATA-GAAT-------TACTA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34247 17 +     67921 AATGAAATA-GAATCA-T----G---
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18895777 15 +  37912305 GATGGAATG-GAAC-------TA---
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  11987 15 +     14536 GATGGAATG-GAAC-------TA---
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31461 20 -     42551 AATGAAATG-GAATCATT-A-CA---
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE759718.1                                   7387 18 +     11740 AATGAAATT-GAAG-------TGGTA
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310253 18 +    607251 AGTAAAATG-GAAC-------TGTTA
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1088976 18 +  10337057 AATGCAATG-GAAT-------TGCTG
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16325743 18 -  41312741 AATGAAATG-AAAC-------TGCTA
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144038 18 -  14770903 AATGAAATA-GAAT-------TGTTA
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279723 18 +   4378816 AATGGAATG-GAAT-------TGTTA
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527544 18 -  39960074 AATGAAATG-GAAT-------TGTTA
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29559 18 +    498745 AATGAAATG-GAAT-------TGTTA
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3325313 17 -   7059049 -ACAAAGTA-CTAT-------GGTCA
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21199897 18 -  21539334 CATGAAACA-GAAT-------GGTTC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10828 18 +    133382 AATGAAATG-GAAT-------TGTTA
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24765 18 -     44125 AATGAAATG-GAAT-------TGTTA
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.AANG03299807.1                                   388 18 -       507 AATGAAATG-GAAT-------TGCCA
i Felis_catus.AANG03299807.1                             C 0 C 0
s Felis_catus_fca126.CM031415.1                           20191966 18 + 205367284 AATGAAATG-GAAT-------TGCCA
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  5491 18 -     36744 AATGAAATG-GAAT-------TGCCA
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             848471 20 +   3816255 AATGGAATG-GAATCA-T-CGTA---
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galagoides_demidoff.k141_31856                              3181 18 -      3432 acaaaaata-gagc-------atatc
i Galagoides_demidoff.k141_31856                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25435 18 +     26054 AATGAAATA-GAAT-------TATTA
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30325 15 +     49224 AATGAAATG-GAAT-------TG---
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_2022027                               1945 18 +      3305 CATGAAACA-GAAT-------GGTTC
i Gorilla_beringei.k141_2022027                          I 97 I 71
s Gorilla_gorilla.CYUI03002401.1                              6238 18 +      7071 catgaaaca-gaat-------ggttc
i Gorilla_gorilla.CYUI03002401.1                         T 18 I 687
s Graphiurus_murinus.GraMur_scaffold_10447                   30053 15 +     78134 GATGAAATG-GAAT-------TA---
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238128 18 +    327341 AATGAAATG-GAAT-------TGCTA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17453 18 +     36099 AATAAAGTG-GAAT-------TGTTA
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20659350 20 +  22651954 AATGAAATT-GAATCATT-A-TA---
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 213 18 +       961 AACAGAATG-GACT-------TGCTG
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112008 18 +    128679 AATGAAATG-GAAT-------TGTTA
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108346 18 +   1711038 AAtgaaatg-gaat-------tgttt
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39787 18 +     43066 AATGAAATG-GAAT-------TGTTT
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    429428 18 +    630532 AATGAAACA-GAAT-------GGTTC
i Hoolock_leuconedys.ctg274                                 I 203 T 203
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40593 18 +     55795 AATGAAACT-GAAT-------TGCTA
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19819 20 -    143317 AATGAAATA-GAATCATT-A-TG---
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_307679                               12348 18 -     15490 CATGAAACA-GAAT-------GGTTC
i Hylobates_agilis.k141_307679                           I 205 T 205
s Hylobates_klossii.k141_282416                              54353 18 +     67168 CATGAAACA-GAAT-------GGTTC
i Hylobates_klossii.k141_282416                          I 205 T 205
s Hylobates_pileatus_b.LG02                                     189538005 18 - 191637585 CATGAAACA-GAAT-------GGTTC
i Hylobates_pileatus_b.LG02                                     I 205 T 205
s Hylobates_pileatus_a.tarseq_633                            3330898 18 -  11177569 CATGAAACA-GAAT-------GGTTC
i Hylobates_pileatus_a.tarseq_633                          I 205 T 205
s Hystrix_cristata.HysCri_scaffold_5660                      80893 20 +    135385 AATACAATA-GAATCA-TGA-TA---
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514560 15 -   7955117 agcaaaatg-aaat-------ca---
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   18137 18 +     31101 AATGAAATA-GAAT-------TGCCA
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22369 18 +     23964 AATGAAATG-GAAT-------TGTTA
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271340 15 -   9596543 AGTGGGAGA-GAAT-------TG---
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1636 18 -      3359 AATGAAATG-GAAT-------TGTTA
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    12217 18 -     42476 AATGAAATG-GAAT-------TGTTA
i Lasiurus_borealis.LasBor_scaffold_32767                I 13 C 0
s Lepilemur_ankaranensis.k141_596936                          6771 18 -     23766 AATGAAACA-GAAT-------TGCTA
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24718 18 +     45836 AATGAAACA-GAAT-------TGCTA
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31629 18 -     32627 AATGAAACA-GAAT-------TGCTA
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      22773 18 +     54090 AATGAAACA-GAAT-------TGCTA
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3036076 18 +   3914936 aataaaatg-aaat-------tgcta
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             267447 18 -    662738 AATGAAATG-GAAT-------TGTTA
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1431795 18 +   1826925 CATGAAATA-GAAT-------GGTTC
i Lophocebus_aterrimus.ctg367                            I 373 T 373
s Loris_lydekkerianus.k141_2539221                             668 15 +     11245 ---AAAACA-GAAT-------TGTTA
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999504 15 +   6120653 ---AAAACA-GAAT-------TGTTA
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214486 18 -  43346337 AATAGAAGG-GAAT-------TGCTA
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951693 18 -  59628241 AATGAAATT-AAAT-------TGCTA
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               1607 18 +     40492 CATGAAATA-GAAT-------GGTTC
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670867 18 +  60120075 CATGAAATA-GAAT-------GGTTC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7365 18 -     26193 CATGAAATA-GAAT-------GGTTC
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75159 18 -    114318 CATGAAATA-GAAT-------GGTTC
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   878 18 -     23192 CATGAAATA-GAAT-------GGTTC
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10331 18 -     29190 CATGAAATA-GAAT-------GGTTC
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18898 18 +     37952 CATGAAATA-GAAT-------GGTTC
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186833986 18 + 187317192 CATGAAATA-GAAT-------GGTTC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452547 18 -  25927173 CATGAAATA-GAAT-------GGTTC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74747 18 +     89720 CATGAAATA-GAAT-------GGTTC
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1744 18 +     20474 CATGAAATA-GAAT-------GGTTC
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1545 18 -     14993 CATGAAATA-GAAT-------GGTTC
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324418 18 -    668171 CATGAAATA-GAAT-------GGTTC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15687 18 -     15935 CATGAAATA-GAAT-------GGTTC
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20484 18 -     45290 CATGAAATA-GAAT-------GGTTC
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87533 18 +     94391 AATGAAATT-GAAG-------TGGTA
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23932039 18 -  24302211 CATGAAATA-GAAA-------GGTTC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346217 18 +    752769 CATGAAATA-GAAA-------GGTTC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15578 18 +    737560 aatgaaatg-aaat-------tgttA
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              46967 18 -    317179 aatgaaatg-aaat-------tgttA
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097410 15 -  40650429 agcaaaatg-aaat-------ca---
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6748 18 -    207569 AATAAAATG-GAAT-------TGTTA
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6207 18 +     13704 AATGAAATG-AAAT-------TGTTA
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3037 18 +     10310 AATGAAATG-GAAT-------TGTAA
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18283297 18 -  93316391 AGTGAAATA-GAAT-------TGCTA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13392 18 -     19307 AATGAAATA-GAAT-------TGTTA
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849066 18 +   8254450 aataaaata-taat-------tgtta
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32942 18 +     64694 AATAAAATA-TAAT-------TGTCA
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3774 18 -     28506 CATGAAATA-GAAT-------GGTTC
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62406 18 -     63350 AATAAAATG-AAAT-------TGCTA
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      4652 17 -     37649 AATGAAA-A-GAAT-------TGCTA
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26542 18 -    437263 AATGAAATG-GAAT-------TGTTA
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137798 18 -    366855 AATGAAAAT-GAAT-------TGTTA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_61429                  27393 18 -     27816 AATAAAATG-GAAT-------TGTTA
i Moschus_moschiferus.MosMos_scaffold_61429              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31329 18 +     37127 AATGAAATA-GAAT-------TGCTA
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5092 18 +     14753 AATGAAATG-GAAT-------TGTTA
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2318 15 +     14296 AATGAAATG-GAAT-------TG---
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               297638 18 -  14710649 AATGAAATG-AAAT-------TGCTA
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                278262 18 -  10118263 AATGAAATG-GAAT-------TGTTA
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585819 18 -   6019432 AATGAAATG-GAAT-------TGTTA
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902028 18 -   4330536 AATGAAATG-GAAT-------TGTTA
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32587 18 +     33610 AATGAAATG-GAAT-------TGTTA
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186078 18 +    196477 ACTGGAATG-AAAT-------TGCTG
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025481 20 -   3037898 AATGGAGTG-GCATCTCT-C-TA---
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                                9787 18 +     21681 CATGAAATA-GAAT-------GGTTC
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865498 18 +   7148211 AATGAAATG-GAAT-------TGTTA
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756362 18 +    783361 AATGAAATA-GAAT-------TGCTA
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145954 18 -   9404916 AATGAAATT-AAAT-------TGCTA
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102574472 15 - 196305487 ---AAAACA-GAAT-------TTTTA
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2158 15 +      8486 ---AAAACA-GAAT-------TTTTA
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744899 15 + 199412804 ---AAAACA-GAAT-------TTTTA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355733  9 +   3988456 A------TT-GCTA-------GA---
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              500695 18 -   2017862 aataaaatg-aaac-------tgcTA
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         144625 18 +    630418 GGCAAAATG-GAAC-------GGTTA
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  2781413 18 -  10937097 AATGAAATG-GAAT-------TGTTA
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6811 18 -     18566 AATACAATG-GAAT-------TACTA
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458708 18 -    559221 AATGAAATT-AAAT-------TGCTA
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17584984 18 +  44047080 AATAAAGTG-TAAT-------TGTTA
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173405 18 -    191736 AATAAAGTG-TAAT-------TGTTA
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    36170 18 +     80009 caggaaaca-gaat-------tgtta
i Pan_paniscus.KQ411613.1                                T 2404 C 0
s Pan_troglodytes.CM009242.2                             187570162 18 + 189151597 caggaaaca-gaat-------tgtta
i Pan_troglodytes.CM009242.2                             n 209 n 209
s Panthera_onca.PanOnc_flattened_line_3271                  147113 18 +    230217 AATGAAATG-GAAT-------TGCGA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                259822 18 +  18783137 AATGAAATG-GAAT-------TGCGA
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4716969 18 -   8748460 AATGAAATG-GAAT-------TGCGA
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1264338 18 -   2937107 AATAAAGTG-GAAT-------TGTTA
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183437361 18 + 183742232 CATGAAATA-GAAT-------GGTTC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1519 18 +     20448 CATGAAATA-GAAT-------GGTTC
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20558045 18 +  20919399 CATGAAATA-GAAT-------GGTTC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                    262 18 +     41871 CATGAAATA-GAAT-------GGTTC
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     3548 18 +     27711 CATGAAATA-GAAT-------GGTTC
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  3447 18 +      9205 CATGAAATA-GAAT-------GGTTC
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8848 18 -     78924 AATGAAACG-AAAT-------TGGTA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            4651 18 +     13100 AATAAAACA-GAAT-------TGCTA
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             3019 18 +     25941 AATAAAACA-GAAT-------TGCTA
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25818 20 -     29689 AATAAAATA-GAATCATT-A-TA---
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8460 18 +     63832 AATGAAATG-GAAT-------TGTTA
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38303 18 +     62158 CATGAAATA-GAAT-------GGCTC
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33030 18 +     89929 CATGAAATA-GAAT-------GGCTC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34446 18 +     51399 CATGAAATA-GAAT-------GGCTC
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290667 18 -  14605196 CATGAAATA-GAAT-------GGCTC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              412 18 +     22620 AATGAAATG-GAAT-------TGTTA
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34166 18 +     35617 AATGAAATG-GAAT-------TGTTA
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189125515 18 + 189387572 CATGAAACA-GAAT-------GGTTC
i Pongo_abelii.CM009266.2                                C 0 T 307
s Pongo_pygmaeus.ctg66                                     9565118 18 +   9816681 CATGAAACA-GAGT-------GGTTC
i Pongo_pygmaeus.ctg66                                   C 0 T 67
s Presbytis_comata.k141_677006                               67947 18 -     81375 CATGAAATA-GAAT-------GGTTC
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9774 18 +     10147 CATGAAATA-GAAT-------GGTTC
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9974 18 -     22811 AACAGAATG-GACT-------TGCTG
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986348 18 +   2598838 AATGAAATA-GAAT-------TGCTA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          24637 18 +     38485 AATGAAATA-GAAT-------TGCTA
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                              798 18 +      4256 AATGAAATA-GAAT-------TGCTA
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22156 18 +     35766 AATGAAATA-GAAT-------TGCTA
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            339 18 -     24134 AATGAAATA-GAAT-------TGCTA
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24151 18 -     67325 AATGAAATA-GAAT-------TGCTA
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            396 18 -      6182 AATGAAATA-GAAT-------TGCTA
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11180 18 -     21811 AATAGAGTA-GAAC-------TGCTA
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36649 18 +     42204 AATGAAATG-AAAT-------TGCTA
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973656 18 +  28871421 AATGAAATT-GAAG-------TGGTA
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1593 18 -      8028 AATGAAATT-GAAG-------TGGTA
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20270280 18 -  38429054 AATGAAATG-GAAT-------TGCCA
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                              9776 18 -     91421 CATGGAATG-GAAT-------GGTTC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603910 18 +   7812017 CATGGAATG-GAAT-------GGTTC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9749 18 -     72585 CATGGAATG-GAAT-------GGTTC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4873 18 +     55207 GGTAAAATG-GAAC-------GGTTA
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        366891 18 -   3329780 aatgaaata-gaat-------tgttA
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             1162 18 -     11128 CATGAAATA-GAAT-------GGTcc
i Rhinopithecus_bieti.k119_217274                        C 0 I 300
s Rhinopithecus_roxellana.NC_044550.1                     91230539 18 - 195417433 CATGAAATA-GAAT-------GGTcc
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 240
s Rhinopithecus_strykeri.ctg102                            7666247 18 +   7961872 CATGAAATA-GAAT-------GGTcc
i Rhinopithecus_strykeri.ctg102                          C 0 I 220
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84642 18 -     96226 AATGAAATT-GAAG-------TGGTA
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3526 18 +      4321 AATAAAGTG-GAAT-------TGTTA
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 C 0
s Semnopithecus_entellus.k141_11662                          14291 18 -     19888 CGTGAAATA-GAAT-------GGTTC
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21496 18 +     39453 CGTGAAATA-GAAT-------GGTTC
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2020 18 +     27826 CGTGAAATA-GAAT-------GGTTC
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1542 18 -     19483 CGTGAAATA-GAAT-------GGTTC
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1604 18 +      7198 CGTGAAATA-GAAT-------GGTTC
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9864 18 +     15514 CGTGAAATA-GAAT-------GGTTC
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187663 18 -    191337 GATGAAATT-GAAA-------AGTCA
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13646997 14 -  18376816 ---AAAGGAGTT---------TATTA
i Sorex_araneus.JH798187.1                               I 3 C 0
s Spermophilus_dauricus.KZ294078.1                         1948202 15 -   3870691 agcaaaatg-aaat-------ca---
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27191 18 +     97271 AATGAAATG-AAAT-------CAGTA
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14198 18 -    196729 AATGAAATG-GGAT-------TGCTA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   62882432 18 -  69701581 AATGAAATG-GAAT-------TTTGA
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1088046 18 -   1523678 CATGAAACA-GAAT-------GGTTC
i Symphalangus_syndactylus.tarseq_199                    I 206 T 206
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6795 18 +     41958 AATGAAAAG-GAAT-------TGTTA
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69440 18 +    116680 ACTGGAATG-AAAT-------TGCTA
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115178 18 -    156842 AATGAAATG-GAAT-------TGTTA
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383633 18 +    539355 AATGAAATG-GAAT-------TGTTG
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10627 18 +     70052 AATGAAATA-TAAT-------TGTTG
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               14932 18 +     25099 AATGAAATA-TAAT-------TGTTG
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422870 18 + 186847797 CATGAAATA-GAAT-------GGTTC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103159 20 +    114563 AATGAAATA-GAATCATT-A-TA---
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   1828 18 +      8208 AATGGAATA-AAAT-------GGCTG
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78936 18 +    610378 CATGAAATA-GAAT-------TGTTA
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          5601 18 -     20410 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9793 18 +     15221 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5701 18 +     19930 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2128 18 -     19997 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42247 18 -     60166 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9719 18 -     27529 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9659 18 -     18194 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3395 18 -     21137 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2097 18 -     10723 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1250 18 +      9834 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19568 18 +     32220 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933665 18 +   6242583 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2910 18 +     20839 CGTGAAATA-GAAT-------GGTTC
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    643 18 -      1748 GATGAAATG-AAAT-------TGTTA
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 C 0
s Tupaia_chinensis.KB320699.1                              2149590 18 +   4065304 AATGAAATG-GAAT-------GGCTA
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     3181 18 -     10553 AGTGATATG-GAAT-------TGCTA
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737660 18 +  33153633 AATGAAATG-GAAC-------TGTTA
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_97021                    1891 18 -      4736 AATGAAATG-GAAA-------TGCTA
i Uropsilus_gracilis.UroGra_scaffold_97021               C 0 C 0
s Ursus_maritimus.KK499267.1                               4846892 18 -   5085361 AATGAAACG-AAAT-------TGCTA
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368364 18 -   5488506 AATGAAGTG-GAGT-------TACTA
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7369 18 -     43706 AATGAAATT-AAAT-------TGCTA
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19697 15 -     24430 AATAAAATG-GAAC-------CA---
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1817 18 +      2932 AATAAAATG-AAAT-------TGCTA
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9974 15 +     63895 AGAGGGAGG-GAAT-------CA---
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11352 18 +     12536 AATGAACTG-GAAT-------TGTAA
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    151358  1 -    313613 I
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25316  0 +     32600 C
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    15418  9 -    145209 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1312 4 +     62944 CGT-----T
s Acinonyx_jubatus.LLWD01001279.1                           823284 1 -   1699592 T--------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 2
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506975 4 -  29979442 CAT-----C
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             75199 4 -    347723 CAT-----T
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64975 7 -     89534 --TAATTTT
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9299 4 -     52922 CAT-----T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9226 4 -     28001 CAT-----T
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9352 4 -      9772 CAT-----T
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            509 4 -     12518 CAT-----T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675149 4 -   2318259 TAT-----T
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183098 4 +    412891 TAT-----T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97601 4 -    100397 TAT-----T
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7255 2 +     20879 --T-----A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14436 4 +     17124 AGT-----G
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2450 4 +     43469 TAT-----T
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  49295 4 -     92717 AAT-----C
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              49920 4 +     85213 AAT-----C
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191534 4 +  23207421 TAT-----T
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2000 4 -     18090 TAT-----T
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26071 4 +     34529 TAT-----T
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    199110 4 -    288883 TAT-----T
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20272315 4 +  48749331 TAT-----T
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1124875 4 -   1948126 TAT-----T
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18082953 4 +  45695690 TAT-----T
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2818442 4 +   4408762 TAT-----T
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998893 4 -  17673402 TGT-----C
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331357 4 -   7040546 TGT-----C
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399633 4 -   1652518 TGT-----C
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795763 4 -  60362399 TAC-----T
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181820 4 -    185531 TAC-----T
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031207 4 -   9314153 TAC-----T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955471 4 -  59632846 TAC-----T
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496772 4 +  63665305 TAC-----T
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18829267 4 +  46296322 TAT-----T
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18059987 4 -  44709034 TAT-----T
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           141030 4 -    496798 AAG-----T
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2868 4 -     11696 TAT-----T
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133631 2 +    179628 --C-----T
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89241 4 +    217609 TAT-----T
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18347456 2 -  23392119 --T-----T
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18359716 2 -  23407841 --T-----T
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98591 2 +    143979 --T-----T
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         4946 4 -      8605 AAT-----T
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227866 4 +  27778364 tat-----t
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2584 4 -      3715 TAT-----T
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470270 4 +   4669795 CGT-----T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8819 4 -     19203 CGT-----T
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3238 4 +      8260 CGT-----T
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3468 4 +     27781 CGT-----T
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3614 4 -     20310 CAT-----T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6598 4 +     29689 CAT-----T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             951 4 +      9989 CAT-----T
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9286 4 -     27936 CAT-----T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9305 4 -     11289 CAT-----T
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811681 4 +  39242232 CAT-----T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217372 4 -  21565898 CAT-----T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34492 4 -     53127 CAT-----T
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1784 4 +      7159 CAT-----T
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9297 4 -     27947 CAT-----T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9273 4 +     17596 CAT-----T
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39767 4 -     41420 CAT-----T
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4788 4 -      6351 CAT-----T
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16713 4 -     52598 AAT-----C
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12062 4 +     57038 AAT-----C
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1248486 2 +   2543920 --T-----T
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18423236 4 -  18827391 CAT-----T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9679 4 -     50209 CAT-----T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416684 4 + 135778131 CAT-----T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15145 4 +     19366 CAT-----T
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170244 4 +    839153 CAT-----T
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1905213 4 +   2368649 CAT-----T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944883 4 + 200372422 CAT-----T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31752 4 +     84244 CAT-----T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545975 4 -  53390261 TAT-----T
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10484 4 -     20389 TAT-----C
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_109268              7542 4 +      9948 CAT-----T
i Crocidura_indochinensis.CroInd_scaffold_109268         C 0 I 53
s Cuniculus_paca.CunPac_flattened_line_231100                 2841 2 +      5455 --T-----G
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1224 2 +      3576 --T-----T
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24229 1 -     87169 T--------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 2
s Dasypus_novemcinctus.JH564415.1                            61058 4 +   2246927 TGT-----T
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532883 4 -  12879189 AAT-----T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811170 4 +  35494412 TAT-----T
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8627899 4 +  20541912 TAT-----T
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669399 4 +   1390856 TAT-----T
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2474 4 +    198055 TAT-----T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34264 2 +     67921 --T-----T
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18895792 2 +  37912305 --T-----T
i Dipodomys_ordii.KN672350.1                             C 0 I 5
s Dipodomys_stephensi.DipSte_scaffold_75855                  12002 2 +     14536 --T-----T
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 I 5
s Dolichotis_patagonum.DolPat_scaffold_30833                 31481 2 -     42551 --T-----T
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE759718.1                                   7405 4 +     11740 CAT-----T
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310271 4 +    607251 TAT-----T
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1088994 4 +  10337057 CAT-----T
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16325761 4 -  41312741 CAT-----T
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144056 4 -  14770903 TAT-----C
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279741 4 +   4378816 TAT-----G
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527562 4 -  39960074 TAT-----G
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29577 4 +    498745 TAT-----G
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3325330 4 -   7059049 TAT-----C
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21199915 4 -  21539334 CAT-----T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10846 4 +    133382 CAT-----T
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24783 4 -     44125 TAT-----T
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Fukomys_damarensis.KN121974.1                             848491 2 +   3816255 --C-----T
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Felis_catus.AANG03299807.1                                   406 1 -       507 T--------
i Felis_catus.AANG03299807.1                             C 0 I 2
s Felis_catus_fca126.CM031415.1                           20191984 1 + 205367284 T--------
i Felis_catus_fca126.CM031415.1                          C 0 I 2
s Felis_nigripes.FelNig_flattened_line_20823                  5509 1 -     36744 T--------
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 2
s Galagoides_demidoff.k141_31856                              3199 4 -      3432 aac-----a
i Galagoides_demidoff.k141_31856                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25453 4 +     26054 TAT-----T
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30340 2 +     49224 --T-----T
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              10404 4 -     32273 CAT-----T
i Gorilla_beringei.k141_3596273                          I 18 T 70
s Gorilla_gorilla.LT578341.1                             186332554 4 + 186649187 CAT-----T
i Gorilla_gorilla.LT578341.1                             I 18 T 69
s Graphiurus_murinus.GraMur_scaffold_10447                   30068 2 +     78134 --T-----T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238146 1 +    327341 T--------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 2
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17471 4 +     36099 TAT-----T
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20659370 2 +  22651954 --T-----T
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 231 4 +       961 TAT-----C
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112026 4 +    128679 TAT-----T
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108364 4 +   1711038 tat-----c
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39805 4 +     43066 TAT-----C
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    429243 4 +    630532 CAT-----T
i Hoolock_leuconedys.ctg274                                 T 203 I 203
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19839 2 -    143317 --T-----T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40611 1 +     55795 T--------
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 2
s Hylobates_agilis.k141_307679                               12161 4 -     15490 CAT-----T
i Hylobates_agilis.k141_307679                           T 205 C 0
s Hylobates_klossii.k141_282416                              54166 4 +     67168 CAT-----T
i Hylobates_klossii.k141_282416                          T 205 C 0
s Hylobates_pileatus_b.LG02                                     189537818 4 - 191637585 CAT-----T
i Hylobates_pileatus_b.LG02                                     T 205 C 0
s Hylobates_pileatus_a.tarseq_633                            3330711 4 -  11177569 CAT-----T
i Hylobates_pileatus_a.tarseq_633                          T 205 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80913 2 +    135385 --C-----T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514575 2 -   7955117 --t-----a
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   18155 4 +     31101 AAT-----C
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22387 4 +     23964 TAT-----T
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271355 7 -   9596543 --TGATTTT
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1654 4 -      3359 TAT-----T
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    12235 4 -     42476 TAT-----T
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6789 4 -     23766 AAT-----C
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24736 4 +     45836 AAT-----C
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31647 4 -     32627 AAT-----C
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      22791 4 +     54090 AAT-----C
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3036094 4 +   3914936 CAT-----T
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             267465 4 -    662738 TAT-----T
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1431440 4 +   1826925 CGT-----T
i Lophocebus_aterrimus.ctg367                            T 373 C 0
s Loris_lydekkerianus.k141_2539221                             683 4 +     11245 AGT-----G
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999519 4 +   6120653 AGT-----G
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214504 4 -  43346337 TAT-----C
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951711 4 -  59628241 TAC-----T
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               1625 4 +     40492 CGT-----T
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670885 4 +  60120075 CGT-----T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7383 4 -     26193 CGT-----T
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75177 4 -    114318 CGT-----T
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   896 4 -     23192 CGT-----T
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10349 4 -     29190 TGT-----T
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18916 4 +     37952 CGT-----T
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834004 4 + 187317192 CGT-----T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452565 4 -  25927173 CGT-----T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74765 4 +     89720 CGT-----T
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1762 4 +     20474 CGT-----T
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1563 4 -     14993 CGT-----T
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324436 4 -    668171 CGT-----T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15705 4 -     15935 CGT-----T
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20502 4 -     45290 CGT-----T
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87551 4 +     94391 TAT-----T
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23932057 4 -  24302211 CGT-----T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346235 4 +    752769 CGT-----T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15596 4 +    737560 TAT-----T
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              46985 4 -    317179 TAT-----T
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097425 2 -  40650429 --t-----a
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6766 4 -    207569 TAT-----C
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6225 4 +     13704 CAT-----T
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3055 4 +     10310 TAT-----T
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18283315 4 -  93316391 AAT-----C
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13410 4 -     19307 CAC-----T
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849084 4 +   8254450 tat-----t
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32960 4 +     64694 TAT-----T
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3792 4 -     28506 CAT-----T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62424 4 -     63350 CAT-----T
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      4669 4 -     37649 AAT-----C
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26560 4 -    437263 TAT-----T
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137816 4 -    366855 TAT-----C
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_61429                  27411 4 -     27816 TAT-----T
i Moschus_moschiferus.MosMos_scaffold_61429              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31347 1 +     37127 T--------
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 2
s Murina_feae.MurFea_scaffold_85699                           5110 4 +     14753 TAT-----T
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2333 2 +     14296 --T-----T
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               297656 4 -  14710649 CAT-----T
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                278280 4 -  10118263 TAT-----T
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585837 4 -   6019432 TAT-----T
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902046 4 -   4330536 TAT-----T
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32605 4 +     33610 TAT-----T
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186096 4 +    196477 TAT-----T
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025501 2 -   3037898 --T-----T
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                                9805 4 +     21681 CAT-----T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865516 4 +   7148211 TAT-----T
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756380 4 +    783361 TAT-----T
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145972 4 -   9404916 TAC-----T
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102574487 4 - 196305487 AGT-----G
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2173 4 +      8486 AGT-----G
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744914 4 + 199412804 AGT-----G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355742 2 +   3988456 --T-----T
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              500713 4 -   2017862 CAT-----T
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         144643 4 +    630418 TAT-----T
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  2781431 4 -  10937097 TAT-----T
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6829 4 -     18566 TAT-----T
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458726 4 -    559221 TAC-----T
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17585002 4 +  44047080 TAT-----T
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173423 4 -    191736 TAT-----T
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    36188 4 +     80009 cat-----t
i Pan_paniscus.KQ411613.1                                C 0 I 2335
s Pan_troglodytes.CM009242.2                             189137348 4 + 189151597 cat-----t
i Pan_troglodytes.CM009242.2                             n 209 I 14
s Panthera_onca.PanOnc_flattened_line_3271                  147131 1 +    230217 T--------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 2
s Panthera_pardus.KV860321.1                                259840 1 +  18783137 T--------
i Panthera_pardus.KV860321.1                             C 0 I 2
s Panthera_tigris.KE722367.1                               4716987 1 -   8748460 T--------
i Panthera_tigris.KE722367.1                             C 0 I 2
s Pantholops_hodgsonii.KE114653.1                          1264356 4 -   2937107 TAT-----T
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183437379 4 + 183742232 CGT-----T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1537 4 +     20448 CGT-----T
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20558063 4 +  20919399 CGT-----T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                    280 4 +     41871 CGT-----T
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     3566 4 +     27711 CGT-----T
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  3465 4 +      9205 CGT-----T
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8866 1 -     78924 T--------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 2
s Perodicticus_ibeanus.k141_855320                            4669 4 +     13100 AGT-----G
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             3037 4 +     25941 AGT-----G
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25838 2 -     29689 --T-----T
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8478 4 +     63832 TAT-----T
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38321 4 +     62158 CAT-----T
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33048 4 +     89929 CAT-----T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34464 4 +     51399 CAT-----T
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290685 4 -  14605196 CAT-----T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              430 4 +     22620 TAT-----T
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34184 4 +     35617 TAT-----T
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189125226 4 + 189387572 CAT-----T
i Pongo_abelii.CM009266.2                                T 307 C 0
s Pongo_pygmaeus.ctg66                                     9565069 4 +   9816681 CAT-----T
i Pongo_pygmaeus.ctg66                                   T 67 I 67
s Presbytis_comata.k141_677006                               67965 4 -     81375 CAT-----T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9792 4 +     10147 CAT-----T
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9992 4 -     22811 TAT-----C
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986366 4 +   2598838 AAT-----C
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          24655 4 +     38485 AAT-----C
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                              816 4 +      4256 AAT-----C
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22174 4 +     35766 AAT-----C
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            357 4 -     24134 AAT-----C
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24169 4 -     67325 AAT-----C
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            414 4 -      6182 AAT-----C
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11198 4 -     21811 CAT-----T
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36667 4 +     42204 CAT-----T
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973674 4 +  28871421 TAT-----T
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1611 4 -      8028 TAT-----T
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20270298 1 -  38429054 T--------
i Puma_concolor.QAVW01001104.1                           C 0 I 2
s Pygathrix_cinerea.k141_1153803                              9794 4 -     91421 CAT-----T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603928 4 +   7812017 CAT-----T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9767 4 -     72585 CAT-----T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4891 4 +     55207 TAT-----T
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        366909 4 -   3329780 TAT-----C
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             1480 4 -     11128 cat-----t
i Rhinopithecus_bieti.k119_217274                        I 300 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230797 4 - 195417433 cat-----t
i Rhinopithecus_roxellana.NC_044550.1                    I 240 I 40
s Rhinopithecus_strykeri.ctg102                            7666485 4 +   7961872 cat-----t
i Rhinopithecus_strykeri.ctg102                          I 220 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84660 4 -     96226 TAT-----T
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3544 4 +      4321 TAT-----T
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151359 2 -    313613 --T-----T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 1 C 0
s Semnopithecus_entellus.k141_11662                          14309 4 -     19888 CAT-----T
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21514 4 +     39453 CAT-----T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2038 4 +     27826 CAT-----T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1560 4 -     19483 CAT-----T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1622 4 +      7198 CAT-----T
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9882 4 +     15514 CAT-----T
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187681 4 -    191337 TAT-----T
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13647011 4 -  18376816 TAT-----C
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1948217 2 -   3870691 --t-----a
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27209 4 +     97271 CAT-----T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14216 1 -    196729 T--------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 2
s Sus_scrofa.CM000828.4                                   62882450 4 -  69701581 CAT-----T
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1087858 4 -   1523678 CAT-----T
i Symphalangus_syndactylus.tarseq_199                    T 206 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6813 4 +     41958 TAT-----T
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69458 4 +    116680 TAT-----T
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115196 4 -    156842 CAT-----C
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383651 4 +    539355 CAT-----C
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10645 4 +     70052 AAT-----T
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               14950 4 +     25099 AAT-----T
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422888 4 + 186847797 CGT-----T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103179 2 +    114563 --T-----T
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   1846 4 +      8208 CAT-----T
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78954 4 +    610378 CAT-----T
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          5619 4 -     20410 CAT-----T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9811 4 +     15221 CAT-----T
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5719 4 +     19930 CAT-----T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2146 4 -     19997 CAT-----T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42265 4 -     60166 CAT-----T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9737 4 -     27529 CAT-----T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9677 4 -     18194 CAT-----T
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3413 4 -     21137 CAT-----T
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2115 4 -     10723 CAT-----T
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1268 4 +      9834 CAT-----T
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19586 4 +     32220 CAT-----T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933683 4 +   6242583 CAT-----T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2928 4 +     20839 CAT-----T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    661 4 -      1748 TAT-----T
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 C 0
s Tupaia_chinensis.KB320699.1                              2149608 4 +   4065304 TAT-----T
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     3199 4 -     10553 TAT-----T
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737678 4 +  33153633 TAT-----T
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_97021                    1909 4 -      4736 TAT-----T
i Uropsilus_gracilis.UroGra_scaffold_97021               C 0 C 0
s Ursus_maritimus.KK499267.1                               4846910 4 -   5085361 CAT-----C
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368382 4 -   5488506 TGT-----C
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7387 4 -     43706 TAC-----T
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19712 2 -     24430 --T-----A
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1835 4 +      2932 CAT-----T
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9989 7 +     63895 --TAATTTT
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11370 4 +     12536 TAT-----T
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Varecia_variegata.k141_1128296                              7155 0 +     24756 C
e Varecia_rubra.k141_590885                                   7107 0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414 0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25316 0 +     32600 C
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    15418 9 -    145209 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Lemur_catta.scaffold_24                                 15519761 0 -  30322482 C
e Hapalemur_occidentalis.k141_907772                          9234 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402 0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298 0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517 0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                               9432 0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267 0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247 0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321 0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369 0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369 0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184 0 -     25546 C
e Eulemur_collaris.k141_377015                                2154 0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453 0 -     14127 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1316 14 +     62944 G---T----CACCGAGTAGAA
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506979  5 -  29979442 A---T----CAC---------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             75203  5 -    347723 A---T----CAC---------
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64982  5 -     89534 A---G----CAC---------
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9303 14 -     52922 G---T----CACCGAGTAGAG
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9230 14 -     28001 G---T----CACCGAGTAGAA
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9356 14 -      9772 G---T----CACCGAGTAGAA
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            513 14 -     12518 G---T----CACCGAGTAGAA
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675153  5 -   2318259 A---T----CAC---------
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183102  5 +    412891 A---T----CAC---------
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97605  5 -    100397 A---T----CAC---------
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7257  5 +     20879 A---T----CAC---------
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14440  5 +     17124 G---T----CAC---------
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2454  5 +     43469 A---T----CAC---------
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  49299  5 -     92717 A---T----CAC---------
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              49924  5 +     85213 A---T----CAC---------
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191538  5 +  23207421 A---T----CAT---------
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2004  5 -     18090 A---T----CAT---------
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26075  5 +     34529 A---T----CAC---------
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    199114  5 -    288883 A---T----CAC---------
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20272319  5 +  48749331 A---T----CAC---------
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1124879  5 -   1948126 A---T----CAC---------
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18082957  5 +  45695690 A---T----CAC---------
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2818446  5 +   4408762 A---T----CAC---------
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998897  5 -  17673402 A---T----CAC---------
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331361  5 -   7040546 A---T----CAC---------
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399637  5 -   1652518 A---T----CAC---------
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795767  5 -  60362399 A---A----CAC---------
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181824  5 -    185531 A---A----CAC---------
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031211  5 -   9314153 A---A----CAC---------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955475  5 -  59632846 A---A----CAC---------
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496776  5 +  63665305 A---A----CAC---------
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18829271  5 +  46296322 A---T----CAC---------
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18059991  5 -  44709034 A---T----CAC---------
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           141034  5 -    496798 A---C----CCC---------
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2872  5 -     11696 A---T----CAC---------
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133633  9 +    179628 G---TCTTACAC---------
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89245  5 +    217609 A---T----CAC---------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18347458  5 -  23392119 A---T----TGT---------
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18359718  5 -  23407841 A---T----TGT---------
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98593  5 +    143979 A---T----TAT---------
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         4950  5 -      8605 G---C----CCC---------
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227870  5 +  27778364 a---T----CAC---------
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2588  5 -      3715 A---T----CAC---------
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470274 14 +   4669795 G---C----CACCGAGTAGAA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8823 14 -     19203 G---C----CACCGAGTAGAA
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3242 14 +      8260 G---C----CACCGAGTAGAA
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3472 14 +     27781 G---C----CACCGAGTAGAA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3618 14 -     20310 G---T----CACCGAGTAGAA
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6602 14 +     29689 G---T----CACCGAGTAGAA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             955 14 +      9989 G---T----CACCGAGTAGAA
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9290 14 -     27936 G---T----CACCGAGTAGAA
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9309 14 -     11289 G---T----CACCGAGTAGAA
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811685 14 +  39242232 G---T----CACCGAGTAGAA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217376 14 -  21565898 G---T----CACCGAGTAGAA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34496 14 -     53127 G---T----CACCGAGTAGAA
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1788 14 +      7159 G---T----CACCGAGTAGAA
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9301 14 -     27947 G---T----CATCAAGTAGAA
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9277 14 +     17596 G---T----CACCGAGTAGAA
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39771 14 -     41420 G---T----CACAGAGTAGAA
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4792  3 -      6351 A---T----C-----------
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16717  5 -     52598 A---T----CAC---------
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12066  5 +     57038 A---T----CAC---------
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1248488  5 +   2543920 A---T----CAT---------
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18423240 14 -  18827391 G---T----CACCGAGTAGAA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9683 14 -     50209 G---T----CACCGAGTAGAA
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416688 14 + 135778131 G---T----CACCGAGTAGAA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15149  5 +     19366 A---T----CAC---------
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170248  5 +    839153 A---T----CAC---------
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1905217 14 +   2368649 G---T----CACCGAGTAGAA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944887 14 + 200372422 G---T----CACCGAGTAGAA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31756 14 +     84244 G---T----CACCGAGTAGAA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545979  5 -  53390261 A---T----TAA---------
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10488  5 -     20389 A---T----CAT---------
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_287352               360  5 +      4208 A---T----CAC---------
i Crocidura_indochinensis.CroInd_scaffold_287352         I 18 I 13
s Cuniculus_paca.CunPac_flattened_line_231100                 2843  5 +      5455 A---T----CAT---------
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1226  5 +      3576 A---T----CCT---------
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            61062  3 +   2246927 A---T----C-----------
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532887  5 -  12879189 A---T----TAC---------
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811174  5 +  35494412 A---T----CAC---------
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8627903  5 +  20541912 A---T----CAC---------
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669403  5 +   1390856 A---T----CAC---------
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2478  5 +    198055 A---T----CAC---------
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34266  5 +     67921 A---T----CAT---------
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18895799  5 +  37912305 A---T----TAT---------
i Dipodomys_ordii.KN672350.1                             I 5 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  12009  5 +     14536 A---T----TAT---------
i Dipodomys_stephensi.DipSte_scaffold_75855              I 5 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31483  5 -     42551 A---T----CAT---------
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE759718.1                                   7409  5 +     11740 T---T----CAT---------
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310275  5 +    607251 A---T----CAC---------
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1088998  5 +  10337057 A---C----CAC---------
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16325765  5 -  41312741 A---A----CAC---------
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144060  5 -  14770903 A---T----CCC---------
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279745  5 +   4378816 A---T----CAC---------
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527566  5 -  39960074 A---T----CAC---------
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29581  5 +    498745 A---T----CAC---------
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3325334  5 -   7059049 A---T----CAT---------
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21199919 14 -  21539334 G---T----CACCGAGTAGAA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10850  5 +    133382 A---T----CAC---------
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24787  5 -     44125 A---T----CAT---------
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Fukomys_damarensis.KN121974.1                             848493  5 +   3816255 G---T----CAT---------
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galagoides_demidoff.k141_31856                              3203  5 -      3432 c---a----ctc---------
i Galagoides_demidoff.k141_31856                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25457  5 +     26054 A---C----CAC---------
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30342  5 +     49224 G---T----CAC---------
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              10338 14 -     32273 G---T----CACCGAGTAGAA
i Gorilla_beringei.k141_3596273                          T 70 I 70
s Gorilla_gorilla.LT578341.1                             186332489 14 + 186649187 G---T----CACCGAGTAGAA
i Gorilla_gorilla.LT578341.1                             T 69 I 69
s Graphiurus_murinus.GraMur_scaffold_10447                   30070  5 +     78134 A---T----CAC---------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17475  5 +     36099 A---T----CAC---------
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20659372  5 +  22651954 A---T----CAT---------
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 235  5 +       961 A---T----CAC---------
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112030  5 +    128679 A---T----CAC---------
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108368  5 +   1711038 A---T----CAC---------
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39809  5 +     43066 A---T----CAC---------
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    429450 14 +    630532 G---T----CACCGAGTAGAA
i Hoolock_leuconedys.ctg274                                 I 203 T 203
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19841  5 -    143317 A---T----CAT---------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_307679                               12165 14 -     15490 G---T----CACCGAGTAGAA
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              54170 14 +     67168 G---T----CACCGAGTAGAA
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189537822 14 - 191637585 G---T----CACCGAGTAGAA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3330715 14 -  11177569 G---T----CACCGAGTAGAA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80915  5 +    135385 A---T----CAT---------
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514577  5 -   7955117 a---t----CAT---------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   18159  5 +     31101 A---T----CAC---------
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22391  5 +     23964 A---T----CAC---------
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271362  5 -   9596543 A---G----CAC---------
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1658  5 -      3359 A---G----CAC---------
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    12239  5 -     42476 A---G----CCT---------
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6793  5 -     23766 A---T----CAC---------
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24740  5 +     45836 A---T----CAC---------
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31651  5 -     32627 A---T----CAC---------
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      22795  5 +     54090 A---T----CAC---------
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3036098  5 +   3914936 A---T----CAC---------
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             267469  5 -    662738 A---T----CAC---------
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1431444 15 +   1826925 G---TC---CACCGAGTAGAA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             687  5 +     11245 A---T----GAC---------
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999523  5 +   6120653 A---T----GAC---------
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214508  5 -  43346337 A---T----CAT---------
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951715  5 -  59628241 A---A----CAC---------
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               1629 14 +     40492 G---T----CACCGAGTAGAA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670889 14 +  60120075 G---T----CACCGAGTAGAA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7387 14 -     26193 G---T----CACCGAGTAGAA
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75181 14 -    114318 G---T----CACCGAGTAGAA
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   900 14 -     23192 G---T----CACCGAGTAGAA
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10353 14 -     29190 G---C----CACCGAGTAGAA
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18920 14 +     37952 G---T----CACCGAGTAGAA
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834008 14 + 187317192 G---T----CACCGAGTAGAA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452569 14 -  25927173 G---T----CACCGAGTAGAA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74769 14 +     89720 G---T----CACCGAGTAGAA
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1766 14 +     20474 G---T----CACCGAGTAGAA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1567 14 -     14993 G---T----CACTGAGTAGAA
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324440 14 -    668171 G---T----CACCGAGTAGAA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15709 14 -     15935 G---T----CACCGAGTAGAA
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20506 14 -     45290 G---T----CACCGAGTAGAA
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87555  5 +     94391 T---T----CAT---------
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23932061 14 -  24302211 G---C----CACCGAGTAGAA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346239 14 +    752769 G---C----CACCGAGTAGAA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15600  5 +    737560 A---C----GAC---------
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              46989  5 -    317179 A---T----CAC---------
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097427  5 -  40650429 a---t----CAT---------
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6770  5 -    207569 A---T----CAT---------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6229  5 +     13704 A---T----CAC---------
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3059  5 +     10310 A---T----CAC---------
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18283319  5 -  93316391 A---T----CAC---------
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13414  5 -     19307 A---T----CAC---------
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849088  5 +   8254450 A---T----CAC---------
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32964  5 +     64694 A---T----CAC---------
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3796 14 -     28506 G---T----CACCGAGTAGAA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62428  5 -     63350 A---T----CAC---------
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      4673  5 -     37649 A---T----CAC---------
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26564  5 -    437263 A---T----CAC---------
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137820  5 -    366855 G---T----TAC---------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_61429                  27415  5 -     27816 A---T----CAC---------
i Moschus_moschiferus.MosMos_scaffold_61429              C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5114  5 +     14753 A---T----TCC---------
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2335  5 +     14296 A---T----CAC---------
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               297660  5 -  14710649 A---T----CAC---------
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                278284  5 -  10118263 A---T----CCC---------
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585841  5 -   6019432 A---T----CCT---------
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902050  5 -   4330536 A---T----CCC---------
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32609  5 +     33610 A---T----CCC---------
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186100  5 +    196477 A---T----CAT---------
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025503  5 -   3037898 A---G----CAC---------
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                                9809 14 +     21681 G---T----CACCGAGTAGAA
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865520  5 +   7148211 A---T----CAC---------
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756384  5 +    783361 G---T----CAC---------
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145976  5 -   9404916 A---A----CAC---------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102574491  5 - 196305487 A---T----CAC---------
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2177  5 +      8486 A---T----CAC---------
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744918  5 + 199412804 A---T----CAC---------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355744  5 +   3988456 A---T----TAC---------
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              500717  5 -   2017862 A---T----CAC---------
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         144647  5 +    630418 A---T----CAC---------
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  2781435  5 -  10937097 A---T----CAC---------
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6833  5 -     18566 G---C----CAC---------
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 I 12
s Otocyon_megalotis.JAEUCK010005147.1                       458730  5 -    559221 A---A----CAC---------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17585006  5 +  44047080 A---T----CAC---------
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173427  5 -    191736 A---T----CAC---------
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    38527 14 +     80009 g---t----caccgagtagaa
i Pan_paniscus.KQ411613.1                                I 2335 C 0
s Pan_troglodytes.NBAG03001836.1                             24368 17 +     51860 gtcat----cactgagtagaa
i Pan_troglodytes.NBAG03001836.1                         T 17 I 577
s Pantholops_hodgsonii.KE114653.1                          1264360  5 -   2937107 A---T----CAC---------
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183437383 14 + 183742232 G---T----CACCGAGTAGAA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1541 14 +     20448 G---T----CACCGAGTAGAA
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20558067 14 +  20919399 G---C----CACCGAGTAGAA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                    284 14 +     41871 G---T----CACCGAGTAGAA
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     3570 14 +     27711 G---T----CACCGAGTAGAA
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  3469 14 +      9205 G---C----CACCGAGTAGAA
i Papio_ursinus.k141_3428135                             C 0 C 0
s Perodicticus_ibeanus.k141_855320                            4673  5 +     13100 G---T----CAC---------
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             3041  5 +     25941 G---T----CAC---------
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25840  5 -     29689 A---T----CAC---------
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8482  5 +     63832 A---T----CAC---------
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38325 14 +     62158 G---T----CACCGAGTAGAA
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33052 14 +     89929 G---T----CACCGAGTAGAA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34468 14 +     51399 G---T----CACCGAGTAGAA
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290689 14 -  14605196 G---T----CACCGAGTAGAA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              434  5 +     22620 A---T----CCC---------
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34188  5 +     35617 A---T----CAC---------
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189125230 14 + 189387572 G---T----CACTGAGTAGAA
i Pongo_abelii.CM009266.2                                C 0 I 307
s Pongo_pygmaeus.ctg66                                     9565140 14 +   9816681 G---T----CACTGAGTAGAA
i Pongo_pygmaeus.ctg66                                   I 67 C 0
s Presbytis_comata.k141_677006                               67969 14 -     81375 G---T----CACCGAGTAGAA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9796 14 +     10147 G---T----CACCGAGTAGAA
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                  9996  5 -     22811 G---T----CAC---------
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986370  5 +   2598838 A---T----CAC---------
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          24659  5 +     38485 A---T----CAC---------
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                              820  5 +      4256 A---T----CAC---------
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22178  5 +     35766 A---T----CAC---------
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            361  5 -     24134 A---T----CAC---------
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24173  5 -     67325 A---T----CAC---------
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            418  5 -      6182 A---T----CAC---------
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11202  5 -     21811 A---T----CAC---------
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36671  5 +     42204 A---T----CAC---------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973678  5 +  28871421 T---T----CAC---------
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1615  5 -      8028 T---T----CAC---------
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                              9798 14 -     91421 G---T----CACCGAGTAGAA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603932 14 +   7812017 G---T----CACCGAGTAGAA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9771 14 -     72585 G---T----CACCGAGTAGAA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4895  5 +     55207 A---T----CAC---------
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        366913  5 -   3329780 A---T----CAC---------
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             1484 14 -     11128 g---t----caccaagtagaa
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230841 14 - 195417433 g---t----caccgagtagaa
i Rhinopithecus_roxellana.NC_044550.1                    I 40 C 0
s Rhinopithecus_strykeri.ctg102                            7666489 14 +   7961872 g---c----cgccgagtagaa
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84664  5 -     96226 T---T----CAT---------
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3548  5 +      4321 A---T----CAC---------
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151361  5 -    313613 A---T----CAA---------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          14313 14 -     19888 G---T----CACCGAGTAGAA
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21518 14 +     39453 G---T----CACCGAGTAGAA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2042 14 +     27826 G---T----CACCGAGTAGAA
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1564 14 -     19483 G---T----CACCGAGTAGAA
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1626 14 +      7198 G---T----CACCGAGTAGAA
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9886 14 +     15514 G---T----CACCGAGTAGAA
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187685  5 -    191337 A---T----CAC---------
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13647015  5 -  18376816 A---T----CAA---------
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1948219  5 -   3870691 a---t----CAT---------
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27213  5 +     97271 A---T----CAC---------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Sus_scrofa.CM000828.4                                   62882454  5 -  69701581 A---T----CAC---------
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1087862 14 -   1523678 G---T----CACCGAGTAGAA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6817  5 +     41958 A---T----CAC---------
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69462  5 +    116680 A---T----CAT---------
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115200  5 -    156842 A---T----CAC---------
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383655  5 +    539355 A---T----CAC---------
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10649  5 +     70052 A---A----CCC---------
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               14954  5 +     25099 A---A----CCC---------
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422892 14 + 186847797 G---C----CACCGAGTAGAA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103181  5 +    114563 A---T----CAT---------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   1850  3 +      8208 A---T----C-----------
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78958  5 +    610378 A---C----CAC---------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          5623 11 -     20410 G---T----CACCG---AGAA
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9815 14 +     15221 G---T----CACCGAGTAGAA
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5723 11 +     19930 G---T----CACCG---AGAA
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2150 14 -     19997 G---T----CACCGAGTAGAA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42269 14 -     60166 G---T----CACCGAGTAGAA
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9741 14 -     27529 G---T----CACCGAGTAGAA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9681 14 -     18194 G---T----CACCGAGTAGAA
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3417 14 -     21137 G---T----CACCGAGTAGAA
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2119 14 -     10723 G---T----CACCGAGTAGAA
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1272 14 +      9834 G---T----CACCGAGTAGAA
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19590 14 +     32220 G---T----CACCGAGTAGAA
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933687 14 +   6242583 G---T----CACCGAGTAGAA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2932 14 +     20839 G---T----CACCGAGTAGAA
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    665  5 -      1748 A---T----CAC---------
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 C 0
s Tupaia_chinensis.KB320699.1                              2149612  5 +   4065304 A---C----CAC---------
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     3203  5 -     10553 A---T----CAC---------
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737682  5 +  33153633 A---T----CAC---------
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_97021                    1913  5 -      4736 A---T----CAC---------
i Uropsilus_gracilis.UroGra_scaffold_97021               C 0 C 0
s Ursus_maritimus.KK499267.1                               4846914  5 -   5085361 A---T----CAC---------
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368386  5 -   5488506 A---T----CAC---------
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7391  5 -     43706 A---A----CAC---------
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19714  5 -     24430 A---T----CAT---------
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1839  5 +      2932 A---T----CAC---------
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       9996  5 +     63895 A---G----CAC---------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11374  5 +     12536 A---T----CAC---------
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Suricata_suricatta.SurSur_flattened_line_6629              14217  2 -    196729 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Puma_concolor.QAVW01001104.1                            20270299  2 -  38429054 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25316  0 +     32600 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8867  2 -     78924 I
e Panthera_tigris.KE722367.1                               4716988  2 -   8748460 I
e Panthera_pardus.KV860321.1                                259841  2 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  147132  2 +    230217 I
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mungos_mungo.MunMun_flattened_line_23663                   31348  2 +     37127 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    15418  9 -    145209 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  40612  2 +     55795 I
e Helogale_parvula.HelPar_flattened_line_2585               238147  2 +    327341 I
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Felis_nigripes.FelNig_flattened_line_20823                  5510  2 -     36744 I
e Felis_catus_fca126.CM031415.1                           20191985  2 + 205367284 I
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             24230  2 -     87169 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           823285  2 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1330 2 +     62944 CC
s Allenopithecus_nigroviridis.k141_3361533                    9317 2 -     52922 CC
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9244 2 -     28001 CC
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9370 2 -      9772 CC
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            527 2 -     12518 CC
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470288 2 +   4669795 CC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8837 2 -     19203 CC
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3256 2 +      8260 CC
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3486 2 +     27781 CC
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3632 2 -     20310 CC
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6616 2 +     29689 CC
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             969 2 +      9989 CC
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9304 2 -     27936 CC
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9323 2 -     11289 CC
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811699 2 +  39242232 CC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217390 2 -  21565898 CC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34510 2 -     53127 CC
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1802 2 +      7159 CC
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9315 2 -     27947 CC
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9291 2 +     17596 CC
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39785 2 -     41420 CC
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chlorocebus_aethiops.ctg25                              18423254 2 -  18827391 CC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9697 2 -     50209 CC
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416702 2 + 135778131 CC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1905231 2 +   2368649 CC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944901 2 + 200372422 CC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31770 2 +     84244 CC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Erythrocebus_patas.Contig38                             21199933 2 -  21539334 CC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Gorilla_beringei.k141_3596273                              10422 2 -     32273 CC
i Gorilla_beringei.k141_3596273                          I 70 I 140
s Gorilla_gorilla.LT578341.1                             186332572 2 + 186649187 CC
i Gorilla_gorilla.LT578341.1                             I 69 I 140
s Hoolock_leuconedys.ctg274                                    429261 2 +    630532 CC
i Hoolock_leuconedys.ctg274                                 T 203 C 0
s Hylobates_agilis.k141_307679                               12179 2 -     15490 CC
i Hylobates_agilis.k141_307679                           C 0 I 205
s Hylobates_klossii.k141_282416                              54184 2 +     67168 CC
i Hylobates_klossii.k141_282416                          C 0 I 205
s Hylobates_pileatus_b.LG02                                     189537836 2 - 191637585 CC
i Hylobates_pileatus_b.LG02                                     C 0 I 205
s Hylobates_pileatus_a.tarseq_633                            3330729 2 -  11177569 CC
i Hylobates_pileatus_a.tarseq_633                          C 0 I 205
s Lophocebus_aterrimus.ctg367                              1431459 2 +   1826925 CC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                               1643 2 +     40492 CC
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670903 2 +  60120075 CC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7401 2 -     26193 CC
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75195 2 -    114318 CC
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   914 2 -     23192 CC
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10367 2 -     29190 CC
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18934 2 +     37952 CC
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834022 2 + 187317192 CC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452583 2 -  25927173 CC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74783 2 +     89720 CC
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1780 2 +     20474 CC
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1581 2 -     14993 CC
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324454 2 -    668171 CC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15723 2 -     15935 CC
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20520 2 -     45290 CC
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23932075 2 -  24302211 CC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346253 2 +    752769 CC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3810 2 -     28506 CC
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Nasalis_larvatus.k141_413338                                9823 2 +     21681 CC
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Pan_paniscus.KQ411613.1                                    38541 2 +     80009 cc
i Pan_paniscus.KQ411613.1                                C 0 I 69
s Pan_troglodytes.CM009242.2                             189137366 2 + 189151597 cc
i Pan_troglodytes.CM009242.2                             I 14 n 577
s Papio_anubis.CM001495.2                                183437397 2 + 183742232 CC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1555 2 +     20448 CC
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20558081 2 +  20919399 CC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                    298 2 +     41871 CC
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     3584 2 +     27711 CC
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  3483 2 +      9205 CC
i Papio_ursinus.k141_3428135                             C 0 C 0
s Piliocolobus_badius.k141_1234363                           38339 2 +     62158 CC
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33066 2 +     89929 CC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34482 2 +     51399 CC
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290703 2 -  14605196 CC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189125551 2 + 189387572 CC
i Pongo_abelii.CM009266.2                                I 307 I 205
s Pongo_pygmaeus.ctg66                                     9565154 2 +   9816681 CC
i Pongo_pygmaeus.ctg66                                   C 0 I 206
s Presbytis_comata.k141_677006                               67983 2 -     81375 CC
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9810 2 +     10147 CC
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Pygathrix_cinerea.k141_1153803                              9812 2 -     91421 CC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603946 2 +   7812017 CC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9785 2 -     72585 CC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             1498 2 -     11128 cc
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230855 2 - 195417433 cc
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7666503 2 +   7961872 cc
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Semnopithecus_entellus.k141_11662                          14327 2 -     19888 CC
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21532 2 +     39453 CC
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2056 2 +     27826 CC
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1578 2 -     19483 CC
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1640 2 +      7198 CC
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9900 2 +     15514 CC
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1087876 2 -   1523678 CC
i Symphalangus_syndactylus.tarseq_199                    C 0 I 206
s Theropithecus_gelada.CM009954.1                        186422906 2 + 186847797 CC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          5634 2 -     20410 CC
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9829 2 +     15221 CC
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5734 2 +     19930 CC
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2164 2 -     19997 CC
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42283 2 -     60166 CC
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9755 2 -     27529 CC
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9695 2 -     18194 CC
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3431 2 -     21137 CC
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2133 2 -     10723 CC
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1286 2 +      9834 CC
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19604 2 +     32220 CC
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933701 2 +   6242583 CC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2946 2 +     20839 CC
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Loris_tardigradus.ctg83                                   999528 0 +   6120653 C
e Loris_lydekkerianus.k141_2539221                             692 0 +     11245 C
e Perodicticus_potto.k141_1092580                             3046 0 +     25941 C
e Perodicticus_ibeanus.k141_855320                            4678 0 +     13100 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            11379 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      10001 0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_63728          1844 0 +      2932 C
e Xerus_inauris.XerIna_scaffold_48378                        19719 0 -     24430 C
e Vulpes_lagopus.VulLag_flattened_line_30954                  7396 0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5368391 0 -   5488506 C
e Varecia_variegata.k141_1128296                              7155 0 +     24756 C
e Varecia_rubra.k141_590885                                   7107 0 +     50397 C
e Ursus_maritimus.KK499267.1                               4846919 0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_97021                    1918 0 -      4736 C
e Tursiops_truncatus.MRVK01000835.1                       15737687 0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     3208 0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2149617 0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                    670 0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     78963 0 +    610378 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   1853 0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103186 0 +    114563 C
e Tarsius_wallacei.k141_780063                               14959 0 +     25099 C
e Tarsius_lariang.k141_2201908                               10654 0 +     70052 C
e Tapirus_terrestris.TapTer_scaffold_755                    383660 0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      115205 0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 69467 0 +    116680 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                 6822 0 +     41958 C
e Sus_scrofa.CM000828.4                                   62882459 0 -  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629              14217 2 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             27218 0 +     97271 C
e Spermophilus_dauricus.KZ294078.1                         1948224 0 -   3870691 C
e Sorex_araneus.JH798187.1                                13647020 0 -  18376816 C
e Solenodon_paradoxus.SolPar_flattened_line_5840            187690 0 -    191337 C
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    151366 0 -    313613 C
e Saiga_tatarica.SaiTat_scaffold_373180                       3553 0 +      4321 C
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                84669 0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        366918 0 -   3329780 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4900 0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20270299 2 -  38429054 I
e Pteropus_vampyrus.KN534172.1                                1620 0 -      8028 C
e Pteropus_alecto.KB030862.1                              22973683 0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         36676 0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            11207 0 -     21811 C
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Propithecus_verreauxi.k141_956661                            423 0 -      6182 C
e Propithecus_tattersalli.k141_790011                        24178 0 -     67325 C
e Propithecus_perrieri.k141_1200571                            366 0 -     24134 C
e Propithecus_edwardsi.k141_1176054                          22183 0 +     35766 C
e Propithecus_diadema.k141_357118                              825 0 +      4256 C
e Propithecus_coronatus.k141_347390                          24664 0 +     38485 C
e Propithecus_coquerelli.NW_012148875.1                     986375 0 +   2598838 C
e Prolemur_simus.MPIZ01000396.1                            2592414 0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10001 0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           34193 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              439 0 +     22620 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               8487 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     25845 0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25316 0 +     32600 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8867 2 -     78924 I
e Pantholops_hodgsonii.KE114653.1                          1264365 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4716988 2 -   8748460 I
e Panthera_pardus.KV860321.1                                259841 2 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  147132 2 +    230217 I
e Ovis_canadensis.OviCan_scaffold_2572                      173432 0 -    191736 C
e Ovis_aries.CM001607.2                                   17585011 0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       458735 0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               6838 12 -     18566 I
e Orcinus_orca.KB316932.1                                  2781440 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144652 0 +    630418 C
e Odobenus_rosmarus.KB229312.1                              500722 0 -   2017862 C
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1355749 0 +   3988456 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744923 0 + 199412804 C
e Nycticebus_coucang.k141_5327727                             2182 0 +      8486 C
e Nycticebus_bengalensis.LG01                            102574496 0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9145981 0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    756389 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5865525 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.KL204047.1                            2025508 0 -   3037898 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186105 0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        32614 0 +     33610 C
e Myotis_lucifugus.GL429869.1                              3902055 0 -   4330536 C
e Myotis_davidii.KB100139.1                                1585846 0 -   6019432 C
e Myotis_brandtii.KE162005.1                                278289 0 -  10118263 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               297665 0 -  14710649 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              2340 0 +     14296 C
e Murina_feae.MurFea_scaffold_85699                           5119 0 +     14753 C
e Mungos_mungo.MunMun_flattened_line_23663                   31348 2 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_61429                  27420 0 -     27816 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 137825 0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    26569 0 -    437263 C
e Mirza_zaza.k141_952172                                      4678 0 -     37649 C
e Mirounga_angustirostris.MirAng_flattened_line_22144        62433 0 -     63350 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             32969 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849093 0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                13419 0 -     19307 C
e Microgale_talazaci.MicTal_scaffold_6613                    15418 9 -    145209 I
e Microcebus_murinus.CM007674.1                           18283324 0 -  93316391 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3064 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365              6234 0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                         6775 0 -    207569 C
e Marmota_marmota.CZRN01000018.1                          33097432 0 -  40650429 C
e Manis_pentadactyla.KN006162.1                              46994 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              15605 0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 87560 0 +     94391 C
e Lycaon_pictus.CM007581.1                                17951720 0 -  59628241 C
e Loxodonta_africana.GL010049.1                            4214513 0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             267474 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3036103 0 +   3914936 C
e Lepilemur_septentrionalis.k141_185316                      22800 0 +     54090 C
e Lepilemur_ruficaudatus.k141_420445                         31656 0 -     32627 C
e Lepilemur_dorsalis.k141_577674                             24745 0 +     45836 C
e Lepilemur_ankaranensis.k141_596936                          6798 0 -     23766 C
e Lemur_catta.scaffold_24                                 15519761 0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12244 0 -     42476 C
e Kogia_breviceps.KogBre_flattened_line_192630                1663 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8271367 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               22396 0 +     23964 C
e Indri_indri.k141_3655594                                   18164 0 +     31101 C
e Ictidomys_tridecemlineatus.JH393364.1                    7514582 0 -   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                      80920 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19846 0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  40612 2 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_29171               39814 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       108373 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112035 0 +    128679 C
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 240 0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20659377 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17480 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               238147 2 +    327341 I
e Hapalemur_occidentalis.k141_907772                          9234 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402 0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298 0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517 0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   30075 0 +     78134 C
e Glis_glis.GliGli_scaffold_19807                            30347 0 +     49224 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_56069               25462 0 +     26054 C
e Galagoides_demidoff.k141_31856                              3208 0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848498 0 +   3816255 C
e Felis_nigripes.FelNig_flattened_line_20823                  5510 2 -     36744 I
e Felis_catus_fca126.CM031415.1                           20191985 2 + 205367284 I
e Eulemur_sanfordi.k141_1122526                               9432 0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267 0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247 0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321 0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369 0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369 0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184 0 -     25546 C
e Eulemur_collaris.k141_377015                                2154 0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453 0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             24792 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           10855 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3325339 0 -   7059049 C
e Equus_przewalskii.KK951119.1                               29586 0 +    498745 C
e Equus_caballus.CM000403.2                               18527571 0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1279750 0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2144065 0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16325770 0 -  41312741 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089003 0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       310280 0 +    607251 C
e Eidolon_helvum.KE759718.1                                   7414 0 +     11740 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 31488 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12014 0 +     14536 C
e Dipodomys_ordii.KN672350.1                              18895804 0 +  37912305 C
e Dinomys_branickii.DinBra_scaffold_21862                    34271 0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    2483 0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  669408 0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8627908 0 +  20541912 C
e Delphinapterus_leucas.KZ290073.1                        16811179 0 +  35494412 C
e Daubentonia_madagascariensis.ctg71                      12532892 0 -  12879189 C
e Dasypus_novemcinctus.JH564415.1                            61065 0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1231 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 2848 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             24230 2 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_287352               365 13 +      4208 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          10493 0 -     20389 C
e Condylura_cristata.JH655891.1                           17545984 0 -  53390261 C
e Choloepus_hoffmanni.KN194906.1                            170253 0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15154 0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1248493 0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           12071 0 +     57038 C
e Cheirogaleus_major.k141_333249                             16722 0 -     52598 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            4795 0 -      6351 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2593 0 -      3715 C
e Cephalopachus_bancanus.k141_2037105                         4955 0 -      8605 C
e Cavia_tschudii.CavTsc_scaffold_8919                        98598 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18359723 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18347463 0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     89250 0 +    217609 C
e Castor_canadensis.CasCan_scaffold_2074                    133642 0 +    179628 C
e Carollia_perspicillata.CarPer_scaffold_92756                2877 0 -     11696 C
e Carlito_syrichta.NW_007259797.1                           141039 0 -    496798 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18059996 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18829276 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18496781 0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17955480 0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9031216 0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    181829 0 -    185531 C
e CanFam4.chr16                                           17795772 0 -  60362399 C
e Camelus_ferus.KB017975.1                                  399642 0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2331366 0 -   7040546 C
e Camelus_bactrianus.KN276810.1                            9998902 0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2818451 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18082962 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1124884 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20272324 0 +  48749331 C
e Bison_bison.KN261452.1                                    199119 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    26080 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2009 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15191543 0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              49929 0 +     85213 C
e Avahi_laniger.k141_765380                                  49304 0 -     92717 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  2459 0 +     43469 C
e Arctocebus_calabarensis.k141_288239                        14445 0 +     17124 C
e Aplodontia_rufa.AprRuf_scaffold_68852                       7262 0 +     20879 C
e Antilocapra_americana.AntAmePen_scaffold_12469             97610 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183107 0 +    412891 C
e Ammotragus_lervia.NIVO01071767.1                          675158 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     64987 0 -     89534 C
e Ailurus_fulgens.LNAC01001112.1                             75208 0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9506984 0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           823285 2 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1332  5 +     62944 CA--------------------T--T--G
s Acinonyx_jubatus.LLWD01001279.1                           823287  3 -   1699592 ----------------------G--T--G
i Acinonyx_jubatus.LLWD01001279.1                        I 2 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9506984 16 -  29979442 -AGAATACAAC-T----C--A-T--T--G
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             75208 16 -    347723 -AGAATAAAAC-T----C--A-C--T--G
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     64987 16 -     89534 -AAAGTA--TG--A--CCC-A-C--T--G
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9319  5 -     52922 CA--------------------T--T--G
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9246  5 -     28001 CA--------------------T--T--G
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9372  5 -      9772 CA--------------------T--T--G
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            529  5 -     12518 CA--------------------T--T--G
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675158 16 -   2318259 -AGAGTAAAA--T----CC-A-T--T--G
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183107 16 +    412891 -AGACTAA----TA--CCC-A-T--T--G
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97610 16 -    100397 -AGAGTAAAA--T----CC-A-T--T--A
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7262 16 +     20879 -AGAGTA---G--AA-CCC-A-T--C--A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14445  4 +     17124 -A--------------------T--T--A
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2459 16 +     43469 -AGACTAA----TACA-C--A-T--T--G
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  49304  4 -     92717 -A--------------------T--T--G
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              49929  4 +     85213 -A--------------------T--T--G
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191543 16 +  23207421 -AGAGTAAAA--T----CC-A-T--T--G
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2009 16 -     18090 -AGAGTAAAA--T----CC-A-T--T--G
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26080 16 +     34529 -AGAGTAAAA--T----CC-A-T--T--G
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    199119 16 -    288883 -AGAGTAAAA--T----CT-G-T--T--G
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20272324 16 +  48749331 -AGAGTAAAA--T----CT-G-T--T--G
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1124884 16 -   1948126 -AGAGTAAAA--T----CT-G-T--T--G
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18082962 16 +  45695690 -AGAGTAAAA--T----CT-G-T--T--G
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2818451 16 +   4408762 -AGAGTAAAA--T----CC-G-T--T--G
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998902 16 -  17673402 -AGAGTAAAA--T----CC-A-C--T--G
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331366 16 -   7040546 -AGAGTAAAA--T----CC-A-C--T--G
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399642 16 -   1652518 -AGAGTAAAA--T----CC-A-C--T--G
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795772 16 -  60362399 -AGAGTAAAA---A--TC--A-T--T--G
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181829 16 -    185531 -AGAGTAAAAC-T----C--A-T--T--G
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031216 16 -   9314153 -AGAGTAAAA---A--TC--A-T--T--G
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955480 16 -  59632846 -AGAGTAAAAC-T----C--A-T--T--G
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496781 16 +  63665305 -ACAGTAAAAC-T----C--A-T--T--G
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18829276 16 +  46296322 -AGAGTAAAA--T----CC-A-T--T--G
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18059996 16 -  44709034 -AGAGTAAAA--T----CC-A-T--T--G
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           141039 16 -    496798 -TGAGTA---G--AA-CCC-T-T--T--G
i Carlito_syrichta.NW_007259797.1                        C 0 I 10
s Carollia_perspicillata.CarPer_scaffold_92756                2877 16 -     11696 -AGACTAA----TA--TCC-A-C--T--G
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133642 16 +    179628 -AGGGTA---G--AA-CCC-A-T--T--G
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89250 16 +    217609 -AG-G-----G-TAAAACCCA-C--T--G
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18347463 16 -  23392119 -A---TAATAG--AA-CCC-A-T--T--G
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18359723 16 -  23407841 -A---TAATAG--AA-CCC-A-T--T--G
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98598 16 +    143979 -AGA--A-----TACAACCCA-T--T--G
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         4955 16 -      8605 -TGAGTA---G--AA-CCC-T-T--T--G
i Cephalopachus_bancanus.k141_2037105                    C 0 I 10
s Ceratotherium_simum.JH767749.1                          12227875 16 +  27778364 -AGAGTCAAA------CCC-A-T--T--G
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2593 16 -      3715 -AGAGTCAAA------CCC-A-T--T--G
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470290  5 +   4669795 CA--------------------T--T--G
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8839  5 -     19203 CA--------------------T--T--G
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3258  5 +      8260 CA--------------------T--T--G
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3488  5 +     27781 CA--------------------T--T--G
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3634  5 -     20310 CA--------------------T--T--G
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6618  5 +     29689 CA--------------------T--T--G
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             971  5 +      9989 CA--------------------T--T--G
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9306  5 -     27936 CA--------------------T--T--G
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9325  5 -     11289 CA--------------------T--T--G
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811701  5 +  39242232 CA--------------------T--T--G
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217392  5 -  21565898 CA--------------------T--T--G
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34512  5 -     53127 CA--------------------T--T--G
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1804  5 +      7159 CA--------------------T--T--G
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9317  5 -     27947 CA--------------------T--T--G
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9293  5 +     17596 CA--------------------T--T--G
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39787  5 -     41420 CA--------------------T--T--G
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4795 21 -      6351 -AGAGTAAAAG-TAAAACC-A-C--T--G
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16722  4 -     52598 -A--------------------T--T--G
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12071  4 +     57038 -A--------------------T--T--G
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1248493 16 +   2543920 -AGAGTAAAA--T---TCC---T--T--G
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18423256  5 -  18827391 CA--------------------T--T--G
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9699  5 -     50209 CA--------------------T--T--G
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416704  5 + 135778131 CA--------------------T--T--G
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15154 21 +     19366 -AGAGTAAAAG-TAAAACC-T-T--T--G
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170253 21 +    839153 -AGAGTAAAAG-TAAAACC-T-T--T--G
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1905233  5 +   2368649 CA--------------------T--T--G
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944903  5 + 200372422 CA--------------------T--T--G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31772  5 +     84244 CA--------------------T--T--G
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545984 15 -  53390261 -AG-GTAA--G----GCCC-A-C--T--G
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10493 16 -     20389 -AGAGTAACA--CA---C--A-T--T--G
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_287352               378  1 +      4208 ----------------------------G
i Crocidura_indochinensis.CroInd_scaffold_287352         I 13 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24232  3 -     87169 ----------------------G--T--G
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 2 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2848 16 +      5455 -AGAGTA---G--AA-CCC-A-T--T--G
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1231 16 +      3576 -AGAGTA---G--AA-CCC-A-C--T--G
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            61065 21 +   2246927 -AGAGTAAA-GCTAAAACC-A-T--T--G
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532892  4 -  12879189 -A--------------------T--T--G
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811179 16 +  35494412 -AGAGTAAAA--T----CC-A-T--T--G
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8627908 16 +  20541912 -AGACTAA----T--GCCC-A-T--T--G
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669408 16 +   1390856 -AGAGTAAAA------CCC-A-T--T--G
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2483 16 +    198055 -AGAGTCAAA------CCC-A-T--T--G
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34271 16 +     67921 -AGAGTAAAAC-T----CC---T--T--G
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18895804 16 +  37912305 -AGAGTA---G--AA-CCC-A-T--C--A
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  12014 16 +     14536 -AGAGTA---G--AA-CCC-A-T--C--A
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31488 16 -     42551 -AGAATA---G--AA-CCC-A-T--T--G
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE759718.1                                   7414 16 +     11740 -AGAATAACA--T---TC--A-T--T--G
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310280 16 +    607251 -AGAGTAAAA--T----CC-A-C--T--G
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1089003 15 +  10337057 -ACAGT----G--AAA-CT-A-C--T--G
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16325770 13 -  41312741 -AGA--AAA-C-T----C--A-C--T--G
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144065 16 -  14770903 -A-A--AA----TAATACCCA-T--T--G
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279750 16 +   4378816 -AGAGTAAAA------CCC-A-T--T--G
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527571 16 -  39960074 -AGAGTAAAA------CCC-C-T--T--G
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29586 16 +    498745 -AGAGTAAAA------CCC-C-T--T--G
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3325339 16 -   7059049 -AGAGCAAAA---A---CC-A-C--T--G
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21199935  5 -  21539334 CA--------------------T--T--G
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10855 16 +    133382 -AGAGTAAAA--T----CC-A-T--T--G
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24792 16 -     44125 -AGAGTAAAA--T----CC-A-T--T--G
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.AANG03299807.1                                   409  3 -       507 ----------------------G--T--G
i Felis_catus.AANG03299807.1                             I 2 C 0
s Felis_catus_fca126.CM031415.1                           20191987  3 + 205367284 ----------------------G--T--G
i Felis_catus_fca126.CM031415.1                          I 2 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  5512  3 -     36744 ----------------------G--T--G
i Felis_nigripes.FelNig_flattened_line_20823             I 2 C 0
s Fukomys_damarensis.KN121974.1                             848498 16 +   3816255 -AGAGCA---G-CA--TCC-A-C--T--G
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galagoides_demidoff.k141_31856                              3208  4 -      3432 -a--------------------t--a--a
i Galagoides_demidoff.k141_31856                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25462 16 +     26054 -AGAATA---G--AAAGC--A-C--T--G
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30347 16 +     49224 -AGAGTA---G--AA-CCC-A-T--C--A
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              10564  5 -     32273 CA--------------------T--T--G
i Gorilla_beringei.k141_3596273                          I 140 C 0
s Gorilla_gorilla.LT578341.1                             186332714  5 + 186649187 CA--------------------T--T--G
i Gorilla_gorilla.LT578341.1                             I 140 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   30075 15 +     78134 -AGAGTA---G--AA-CCC-A-T--C---
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238149  3 +    327341 ----------------------G--T--G
i Helogale_parvula.HelPar_flattened_line_2585            I 2 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17480 16 +     36099 -AGAGTAAAA--T----CC-A-T--T--G
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20659377 16 +  22651954 -AGAGTA---G--AACTC--A-T--T--G
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 240 15 +       961 -ACAGCAAAA--T----CC---T--T--G
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112035 16 +    128679 -AGAGTAAAA--T----CC-A-T--T--G
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108373 16 +   1711038 -AGCGT----G--ACACCC-A-T--T--G
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39814 16 +     43066 -AGCGT----G--ACACCC-A-T--T--G
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    429263  5 +    630532 TG--------------------C--T--G
i Hoolock_leuconedys.ctg274                                 C 0 I 200
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40614  3 +     55795 ----------------------G--T--G
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 2 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19846 16 -    143317 -AGAATA---G--AA-TCC-A-T--T--G
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_307679                               12386  5 -     15490 CA--------------------T--T--G
i Hylobates_agilis.k141_307679                           I 205 C 0
s Hylobates_klossii.k141_282416                              54391  5 +     67168 CA--------------------T--T--G
i Hylobates_klossii.k141_282416                          I 205 C 0
s Hylobates_pileatus_b.LG02                                     189538043  5 - 191637585 CA--------------------T--T--G
i Hylobates_pileatus_b.LG02                                     I 205 C 0
s Hylobates_pileatus_a.tarseq_633                            3330936  5 -  11177569 CA--------------------T--T--G
i Hylobates_pileatus_a.tarseq_633                          I 205 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80920 16 +    135385 -AGAGTA---G--AAA-CC-A-T--T--G
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514582 16 -   7955117 -AGAGTA---G--AA-CCC-A-T--C--A
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   18164  4 +     31101 -A--------------------T--T--G
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22396 16 +     23964 -AGAGTAAAA--T----CC-A-T--T--G
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271367 16 -   9596543 -AAAGTA---G-GA--TCC-A-C--T--G
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1663 16 -      3359 -AGAGTAAAA--T----CC-A-T--T--G
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    12244 16 -     42476 -GGA--A-----TAAAACC-TGT--T--G
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6798  4 -     23766 -A--------------------T--T--G
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24745  4 +     45836 -A--------------------T--T--G
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31656  4 -     32627 -A--------------------T--T--G
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      22800  4 +     54090 -A--------------------T--T--G
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3036103 16 +   3914936 -AAAGTAAAAC-T----C--A-T--T--G
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             267474 16 -    662738 -AGAGTAAAA--T----CC-A-T--T--G
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1431461  5 +   1826925 CA--------------------T--T--G
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             692  4 +     11245 -A--------------------T--T--A
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999528  4 +   6120653 -A--------------------T--T--A
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214513 15 -  43346337 -AGAGTAAAA-------CC-A-T--T--G
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951720 16 -  59628241 -AGAGTAAAAC-T----C--A-T--T--G
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               1645  5 +     40492 CA--------------------T--T--G
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670905  5 +  60120075 CA--------------------T--T--G
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7403  5 -     26193 CA--------------------T--T--G
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75197  5 -    114318 CA--------------------T--T--G
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   916  5 -     23192 CA--------------------T--T--G
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10369  5 -     29190 CA--------------------T--T--G
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18936  5 +     37952 CA--------------------T--T--G
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834024  5 + 187317192 CA--------------------T--T--G
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452585  5 -  25927173 CA--------------------T--T--G
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74785  5 +     89720 CA--------------------T--T--G
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1782  5 +     20474 CA--------------------T--T--G
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1583  5 -     14993 CA--------------------T--T--G
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324456  5 -    668171 CA--------------------T--T--G
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15725  5 -     15935 CA--------------------T--T--G
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20522  5 -     45290 CA--------------------T--T--G
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87560 16 +     94391 -AGAATAACA--T---TC--A-T--T--G
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23932077  5 -  24302211 CA--------------------T--T--G
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346255  5 +    752769 CA--------------------T--T--G
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15605 16 +    737560 -AGAGTA-----TAAATGC---T--T--G
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              46994 16 -    317179 -AGAGTA-----TAAATGC---T--T--G
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097432 16 -  40650429 -ATAGTA---G--AACTC--A-T--C--A
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6775 16 -    207569 -AGGGTAA--C-T---CCC-A-T--T--A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6234 16 +     13704 -AGAGTAAAAC-T----C--A-T--T--G
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3064 16 +     10310 -AGATTAAAA--T----CC-A-T--T--G
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18283324  4 -  93316391 -A--------------------T--T--G
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13419 16 -     19307 -AGACTA---G-TA--CCC-A-T--T--G
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849093 16 +   8254450 -AGAGTAACA--T----CC-A-T--T--G
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32969 16 +     64694 -AGAGTAACA--T----CC-A-T--T--G
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3812  5 -     28506 CA--------------------T--T--G
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62433 16 -     63350 -AAAGTAAAAC-T----C--A-C--T--G
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      4678  4 -     37649 -A--------------------T--T--G
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26569 16 -    437263 -AGAGTAAAA--T----CC-A-T--T--G
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137825 16 -    366855 -AG-G-----G-TAAAACC-AGT--T--G
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_61429                  27420 14 -     27816 -AG--TAAAA--T---TC--A-T--T--G
i Moschus_moschiferus.MosMos_scaffold_61429              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31350  3 +     37127 ----------------------G--T--G
i Mungos_mungo.MunMun_flattened_line_23663               I 2 C 0
s Murina_feae.MurFea_scaffold_85699                           5119 16 +     14753 -GGAATAA----TA--CCC-A-T--T--G
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2340 16 +     14296 -AGAGTA---G--AA-CCC-A-T--C--T
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               297665 16 -  14710649 -AGAGTAAAAC-T----C--A-C--T--G
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                278289 16 -  10118263 -GGAATAA----TA---CCTA-T--T--G
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585846 16 -   6019432 -GGAATAA----TA---CCTA-T--T--G
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902055 16 -   4330536 -GGA--ACAA--TA---CCTA-T--T--G
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32614 16 +     33610 -AGAATAA----TA---CCTA-T--T--G
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186105 21 +    196477 -ACAATAAAAG-TAAAACC-A-C--T--G
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 I 2
s Nannospalax_galili.KL204047.1                            2025508 16 -   3037898 -AGA--AGA-G--AA-TCC-A-T--T--G
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                                9825  5 +     21681 CA--------------------T--T--G
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865525 16 +   7148211 -AGAGTAAAA--T----CC-A-T--T--G
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756389 16 +    783361 -AAAGCAA----TA--CCC-A-T--T--G
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145981 16 -   9404916 -AGAGTAAAAC-T----C--A-T--T--G
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102574496  4 - 196305487 -A--------------------T--T--A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2182  4 +      8486 -A--------------------T--T--A
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744923  4 + 199412804 -A--------------------T--T--A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355749 16 +   3988456 -ACAGT----G-GAA-CCC-A-T--T--C
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              500722 16 -   2017862 -AAAGTAAAAC-T----C--A-T--T--G
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         144652 16 +    630418 -AGAGTAAAA--T----CC-T-C--T--G
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  2781440 16 -  10937097 -AGGGTAAAA--T----CC-A-T--T--G
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6850  3 -     18566 ----------------------T--A--G
i Orycteropus_afer.OryAfe_flattened_line_144387          I 12 I 3
s Otocyon_megalotis.JAEUCK010005147.1                       458735 16 -    559221 -AGAGTAAAAC-T----C--A-T--T--G
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17585011 16 +  44047080 -AGAGTAAAA--T----CC-A-T--T--G
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173432 16 -    191736 -AGAGTAAAA--T----CC-A-T--T--G
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    38612  7 +     80009 tg--------------------c--tata
i Pan_paniscus.KQ411613.1                                I 69 I 90
s Pan_troglodytes.CM009242.2                             187570839  7 + 189151597 cg--------------------ctat--g
i Pan_troglodytes.CM009242.2                             n 577 n 577
s Panthera_onca.PanOnc_flattened_line_3271                  147134  3 +    230217 ----------------------G--T--G
i Panthera_onca.PanOnc_flattened_line_3271               I 2 C 0
s Panthera_pardus.KV860321.1                                259843  3 +  18783137 ----------------------G--T--G
i Panthera_pardus.KV860321.1                             I 2 C 0
s Panthera_tigris.KE722367.1                               4716990  3 -   8748460 ----------------------G--T--G
i Panthera_tigris.KE722367.1                             I 2 C 0
s Pantholops_hodgsonii.KE114653.1                          1264365 16 -   2937107 -AGAGTAAAA--T----CC-A-T--T--G
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183437399  5 + 183742232 CA--------------------T--T--G
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1557  5 +     20448 CA--------------------T--T--G
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20558083  5 +  20919399 CA--------------------T--T--G
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                    300  5 +     41871 CA--------------------T--T--G
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     3586  5 +     27711 CA--------------------T--T--G
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  3485  5 +      9205 CA--------------------T--T--G
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8869  3 -     78924 ----------------------G--T--G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 2 C 0
s Perodicticus_ibeanus.k141_855320                            4678  4 +     13100 -C--------------------T--T--A
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             3046  4 +     25941 -C--------------------T--T--A
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25845 15 -     29689 -AGAGTA---G--AA--CT-A-G--T--G
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8487 16 +     63832 -AGAGTAAAA--T----CC-A-T--T--G
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38341  5 +     62158 CA--------------------T--T--G
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33068  5 +     89929 CA--------------------T--T--G
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34484  5 +     51399 CA--------------------T--T--G
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290705  5 -  14605196 CA--------------------T--T--G
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              439 16 +     22620 -AGA-TAAA---TA--CCC-A-T--T--G
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34193 16 +     35617 -AGAGTAAAA--T----CC-A-T--T--G
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189125758  5 + 189387572 CA--------------------T--T--G
i Pongo_abelii.CM009266.2                                I 205 C 0
s Pongo_pygmaeus.ctg66                                     9565362  5 +   9816681 CA--------------------T--T--G
i Pongo_pygmaeus.ctg66                                   I 206 C 0
s Presbytis_comata.k141_677006                               67985  5 -     81375 CA--------------------T--T--G
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9812  5 +     10147 CA--------------------T--T--G
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 10001 15 -     22811 -ACAGCAAAA-------CC-C-T--T--G
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986375  4 +   2598838 -A--------------------T--T--A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          24664  4 +     38485 -A--------------------T--T--A
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                              825  4 +      4256 -A--------------------T--T--A
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22183  4 +     35766 -A--------------------T--T--A
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            366  4 -     24134 -A--------------------T--T--A
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24178  4 -     67325 -A--------------------T--T--A
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            423  4 -      6182 -A--------------------T--T--A
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11207 21 -     21811 -AGACTA-TCC-TAATACCCA-T--T--G
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36676 16 +     42204 -AGAGTAAAAC-T----C--A-C--T--G
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973683 16 +  28871421 -AGAATAACA--T----CC-A-T--T--G
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1620 16 -      8028 -AGAATAACA--T----CC-A-T--T--G
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20270301  3 -  38429054 ----------------------G--T--G
i Puma_concolor.QAVW01001104.1                           I 2 C 0
s Pygathrix_cinerea.k141_1153803                              9814  5 -     91421 CA--------------------T--T--G
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603948  5 +   7812017 CA--------------------T--T--G
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9787  5 -     72585 CA--------------------T--T--G
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4900 16 +     55207 -AGAGTAAAA--T----CC-T-C--T--G
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        366918 16 -   3329780 -AGCGTAACA------CCC-A-T--T--G
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             1500  5 -     11128 ca--------------------t--t--g
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230857  5 - 195417433 ca--------------------t--t--g
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7666505  5 +   7961872 ca--------------------t--t--g
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84669 16 -     96226 -AGAATAACA--T---TC--A-T--T--G
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3553 16 +      4321 -AGAGTAAAA--T----CC-A-T--T--G
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151366 15 -    313613 -AG-GTAAA-G-----CCC-A-T--T--G
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          14329  5 -     19888 CA--------------------T--T--G
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21534  5 +     39453 CA--------------------T--T--G
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2058  5 +     27826 CA--------------------T--T--G
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1580  5 -     19483 CA--------------------T--T--G
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1642  5 +      7198 CA--------------------T--T--G
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9902  5 +     15514 CA--------------------T--T--G
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187690 16 -    191337 -AGAGTAAAA------CCC-C-T--T--G
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13647020 16 -  18376816 -AGA--A-----TAAAACC-TGG--T--G
i Sorex_araneus.JH798187.1                               C 0 I 10
s Spermophilus_dauricus.KZ294078.1                         1948224 16 -   3870691 -AGAGTA---G--AA-CCC-A-T--C--A
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27218 16 +     97271 -ACAGTAAAAC-T----C--A-C--T--G
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14219  3 -    196729 ----------------------G--T--A
i Suricata_suricatta.SurSur_flattened_line_6629          I 2 C 0
s Sus_scrofa.CM000828.4                                   62882459 16 -  69701581 -AGAGTAAAA------CCC-A-T--T--G
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1088084  5 -   1523678 CA--------------------T--T--G
i Symphalangus_syndactylus.tarseq_199                    I 206 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6822 16 +     41958 -AGAGTAA----TA--CCC-A-T--T--G
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69467 21 +    116680 -ACGGTAAAAG-TAAAACC-A-T--T--G
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 I 2
s Tapirus_indicus.TapInd_scaffold_9301                      115205 16 -    156842 -AAAGTAAAAC-T----C--A-T--T--G
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383660 16 +    539355 -A-A--A---G-TAAAACCCA-T--T--G
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10654 16 +     70052 -TGAGTA---G--AA-CCC-T-T--T--G
i Tarsius_lariang.k141_2201908                           C 0 I 10
s Tarsius_wallacei.k141_780063                               14959 16 +     25099 -TGAGTA---G--AA-CCC-T-T--T--G
i Tarsius_wallacei.k141_780063                           C 0 I 10
s Theropithecus_gelada.CM009954.1                        186422908  5 + 186847797 CA--------------------T--T--G
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103186 16 +    114563 -ACAGT------TAAAGCC-A-A--T--G
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   1853 21 +      8208 -AGAGTAAAAG-TAAAACC-A-T--T--G
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 I 9
s Tonatia_saurophila.TonSau_scaffold_294                     78963 16 +    610378 -AGACTAA--G--A--CCC-A-T--T--G
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          5636  5 -     20410 CA--------------------T--T--G
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9831  5 +     15221 CA--------------------T--T--G
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5736  5 +     19930 CA--------------------T--T--G
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2166  5 -     19997 CA--------------------T--T--G
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42285  5 -     60166 CA--------------------T--T--G
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9757  5 -     27529 CA--------------------T--T--G
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9697  5 -     18194 CA--------------------T--T--G
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3433  5 -     21137 CA--------------------T--T--G
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2135  5 -     10723 CA--------------------T--T--T
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1288  5 +      9834 CA--------------------T--T--G
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19606  5 +     32220 CA--------------------T--T--G
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933703  5 +   6242583 CA--------------------T--T--G
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2948  5 +     20839 CA--------------------T--T--G
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    670 16 -      1748 -AGAATAAAA--T---TC--A-T--T--G
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 C 0
s Tupaia_chinensis.KB320699.1                              2149617 15 +   4065304 -AGAGTA---G--A--CCC-A-C--T--G
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     3208 15 -     10553 -AGAGTA---G--A--CCC-A-C--T--G
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737687 16 +  33153633 -AGAGTAAAA--T----CC-A-T--T--G
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_97021                    1918 16 -      4736 -A-AGGAAAAG-T----CC-A-T--G--G
i Uropsilus_gracilis.UroGra_scaffold_97021               C 0 C 0
s Ursus_maritimus.KK499267.1                               4846919 16 -   5085361 -AGAGTACAAC-T----C--A-T--T--G
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368391 16 -   5488506 -AGAGTAAAA--T----CC-A-C--T--G
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7396 16 -     43706 -AGAGTAAAAC-T----C--A-T--T--G
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19719 16 -     24430 -AGAGTA---G--AA-CCC-A-T--C--A
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1844 16 +      2932 -AAAGTAAAAC-T----C--A-T--T--G
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      10001 15 +     63895 -AAAGTA---G-GA---CC-A-C--T--G
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11379 16 +     12536 -AGATTAAAA--T----CC-A-T--T--G
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25316  0 +     32600 C
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    15418  9 -    145209 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1337 31 +     62944 GCCAAT--AA--CTC--T-------G--AC---AA-A-TAT-TATTTTCTGG
s Acinonyx_jubatus.LLWD01001279.1                           823290 24 -   1699592 GCCAAT--Ag--c----t-------c--agga-aa-a-tat-ttt-------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507000 24 -  29979442 GCCAAT--Aa--c----t-------c--aa-acaa-a-tat-ttt-------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 3
s Ailurus_fulgens.LNAC01001112.1                             75224 24 -    347723 GCCAAT--AA--C----T-------C--ag-acaa-a-tat-ttt-------
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 3
s Allactaga_bullata.AllBul_scaffold_9566                     65003 27 -     89534 GATAAT--AA--A----T-------G--AT---AATA-CA----TGTTATGA
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9324 38 -     52922 CTCAAT--AG--CTC--TGACCACTG--AC---CA-A-TAT-TATTTTCTAG
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9251 38 -     28001 CTCAAT--AG--CTC--TGACCACTG--AC---CA-A-TAT-TATTTTCTAG
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9377 38 -      9772 CTCAAT--AG--CTC--TGACCACTG--AC---CA-A-TAT-TATTTTCTAG
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            534 38 -     12518 CTCAAT--AG--CTC--TGACCACTG--AC---CA-A-TAC-TATTTTCTAG
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675174 16 -   2318259 GTCAAT--AA--C--TCT-------G--AT---G------------------
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 12
s Anoura_caudifer.AnoCau_scaffold_1412                      183123 31 +    412891 GCCAGT--AA--C--TCT-------G--GT---GA-A-TAT-TGTTTTCTGG
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97626 31 -    100397 GTCAAT--AA--C--TCT-------G--AT---GA-A-TAC-CATTTTCTTG
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7278 33 +     20879 GACATTTGAA--GTC--T-------G--AC---AA-A-TAT-TACATTCTGG
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14449 31 +     17124 GCCATA--AA--CTC--T-------G--AC---AA-A-TAC-CAGTTTCTGG
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2475 31 +     43469 GCCAAT--AA--T--TCT-------G--GT---GA-A-CAT-TTCTTTCTGG
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  49308 31 -     92717 GCCAAT--AA--CTC--T-------G--AC---AA-A-TTT-CATTTTCTGG
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              49933 31 +     85213 GCCAAT--AA--CTC--T-------G--AC---AA-A-TTT-CATTTTCTGG
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191559 31 +  23207421 GCCAAT--AA--C--TCT-------G--AT---GA-A-TAT-GATTTTCTGG
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2025 31 -     18090 GCCAAT--AA--C--TCT-------G--AT---GA-A-TAT-GATTTTCTGG
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26096 16 +     34529 GTCAAT--AA--C--TCT-------G--AT---G------------------
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 12
s Bison_bison.KN261452.1                                    199135 31 -    288883 GTCAGT--AA--C--TCT-------A--AT---GA-A-TAC-CATTTTCTGG
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20272340 31 +  48749331 GTCAGT--AA--C--TCT-------A--AT---GA-A-TAC-CATTTTCTGG
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1124900 31 -   1948126 GTCAGT--AA--C--TCT-------A--AT---GA-A-TAC-CATTTTCTGG
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18082978 31 +  45695690 GTCAGT--AA--C--TCT-------A--AT---GA-A-TAC-CATTTTCTGG
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2818467 31 +   4408762 GTCAGT--AA--C--TCT-------G--AT---GA-A-TAC-CATTTTCTGG
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998918 29 -  17673402 GCCAAT--AA--C----T-------G--AT---GA-G-TAT-TATTTTCTGG
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331382 29 -   7040546 GCCAAT--AA--C----T-------G--AT---GA-C-TAT-TATTTTCTGG
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399658 29 -   1652518 GCCAAT--AA--C----T-------G--AT---GA-C-TAT-TATTTTCTGG
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795788 10 -  60362399 GCCAAT--AA--C----T----------------------------------
i CanFam4.chr16                                          C 0 I 10
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181845 10 -    185531 GCCAAT--AA--C----T----------------------------------
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 I 10
s Canis_lupus_dingo.QKWQ01000480.1                         9031232 10 -   9314153 GCCAAT--AA--c----t----------------------------------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 10
s Canis_lupus_familiaris.chr16                            17955496 10 -  59632846 GCCAAT--AA--c----t----------------------------------
i Canis_lupus_familiaris.chr16                           C 0 I 10
s Canis_lupus_orion.HG994398.1                            18496797 10 +  63665305 GCCAAT--AA--C----t----------------------------------
i Canis_lupus_orion.HG994398.1                           C 0 I 10
s Capra_aegagrus.CM003241.1                               18829292 16 +  46296322 GTCAGT--AA--C--TCT-------G--AT---G------------------
i Capra_aegagrus.CM003241.1                              C 0 I 12
s Capra_hircus.CM004588.1                                 18060012 16 -  44709034 GTCAGT--AA--C--TCT-------G--AT---G------------------
i Capra_hircus.CM004588.1                                C 0 I 12
s Carlito_syrichta.NW_007259797.1                           141065 19 -    496798 -------------------------g--ac---aa-a-tat-tattttctgg
i Carlito_syrichta.NW_007259797.1                        I 10 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2893 31 -     11696 GCCAAT--AA--T--TCT-------G--GC---GA-A-TAT-TATTTTCTGG
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133658 29 +    179628 GCCAAT--AA--C----T-------G--AC---AA-A-TAC-TGTTTTCTGG
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89266 31 +    217609 GCCAAT--AA--C--ACT-------T--AT---GA-A-TAT-TAGTTTCTGG
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18347479 31 -  23392119 GCCATT--AA--CTC--T-------G--AT---GA-A-TAT-TATATTCTGG
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18359739 31 -  23407841 GCCATT--AA--CTC--T-------G--AT---GA-A-CAT-TATATTCTGG
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98614 33 +    143979 GCCATT--AA--CTCTTT-------G--AT---GA-A-TAT-TATATTCTGG
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         4981 19 -      8605 -------------------------G--AC---AA-A-TAT-TATTTTCTGG
i Cephalopachus_bancanus.k141_2037105                    I 10 C 0
s Ceratotherium_simum.JH767749.1                          12227891 31 +  27778364 GCCAAT--AA--C--CCT-------A--AC---AA-A-TAT-TACTTTCTGG
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2609 31 -      3715 GCCAAT--AA--C--CCT-------A--AC---AA-A-TAT-TACTTTCTGG
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470295 31 +   4669795 CTCAGT--AG--CTC--T-------G--AA---CA-A-TAT-TATTTTCTAG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8844 31 -     19203 CTCAGT--AG--CTC--T-------G--AA---CA-A-TAT-TATTTTCTAG
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3263 31 +      8260 CTCAGT--AG--CTC--T-------G--AA---CA-A-TAT-TATTTTCTAG
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3493 31 +     27781 CTCAGT--AG--CTC--T-------G--AA---CA-A-TAT-TATTTTCTAG
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3639 38 -     20310 CTCAAT--AG--CTC--TGACCACTG--AC---CA-A-TAT-TATTTTCTAG
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6623 38 +     29689 CTCAAT--AG--CTC--TGACCACTG--AC---CA-A-TAT-TATTTTCTAG
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                             976 38 +      9989 CTCAAT--AG--CTT--TGACCACTG--AC---CA-A-TAT-TATTTTCTAG
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9311 38 -     27936 CTCAAT--AG--CTT--TGACCACTG--AC---CA-A-TAT-TATTTTCTAG
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9330 38 -     11289 CTCAAT--AG--CTC--TGACCACTG--AC---CA-A-TAT-TATTTTCTAG
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811706 38 +  39242232 CTCAAT--AG--CTC--TGACCACTG--AC---CA-A-TAT-TATTTTCTAG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217397 38 -  21565898 CTCAAT--AG--CTC--TGACCACTG--AC---CA-A-TAT-TATTTTCTAG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34517 38 -     53127 CTCAAT--AG--CTC--TGACCACTG--AC---CA-A-TAT-TATTTTCTAG
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1809 38 +      7159 CTCAAT--AG--CTC--TGACCACTG--AC---CA-A-TAT-TATTTTCTAG
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9322 38 -     27947 CTCAAT--AG--CTC--TGACCACTG--AC---CA-A-TAT-TATTTTCTAG
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9298 38 +     17596 CTCAAT--AG--CTC--TGACCCCTG--AC---CA-A-TAT-TATTTTCTAG
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39792 38 -     41420 CTCAAT--AG--CTC--TGACCACTG--AC---CA-A-TAT-TATTTTCTAG
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4816 31 -      6351 GCCAGT--AA--C--TCT-------G--AC---AA-A-CAT-TATTTTGTGG
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16726 31 -     52598 GCCAAT--AA--CTC--T-------G--AA---AA-A-TAT-CATTTTCTGA
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12075 31 +     57038 GCCAAT--AA--CTC--T-------G--AA---AA-A-TAT-CATTTTCTGA
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1248509 31 +   2543920 CCCAAT--AA--CTC--T-------G--AT---GA-A-TAT-TAATTTCTGG
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18423261 38 -  18827391 CTCAAT--AG--CTC--TGACCACTG--AC---CA-A-TAT-TATTTTCTAG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9704 38 -     50209 CTCAAT--AG--CTC--TGACCACTG--AC---CA-A-TAT-TATTTTCTAG
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416709 38 + 135778131 CTCAAT--AG--CTC--TGACCACTG--AC---CA-A-TAT-TATTTTCTAG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15175 31 +     19366 GCCAAT--AT--C--TCT-------G--AC---AA-A-TAT-TATTTTGTGG
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170274 31 +    839153 GCCAAT--AT--C--TCT-------G--AC---AA-A-TAT-TATTTTGTGG
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1905238 31 +   2368649 CCCAAT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944908 31 + 200372422 CCCAAT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31777 31 +     84244 CCCAAT--AG--CTT--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17545999 31 -  53390261 GCCAGTTGCT--C----T-------G--AT---GG-A-TAT-GACTTTCTGG
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10509 31 -     20389 GCTAAT--AA--C--TCT-------G--AT---AA-C-TAT-TATTTTCTGG
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_287352               379 31 +      4208 GGTAGT--CA--C----T--C---TG--GT---GG-A-TAT-TAAATTCAGG
i Crocidura_indochinensis.CroInd_scaffold_287352         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24235 23 -     87169 GCCAGT---G--C----T-------C--AGGC-AA-A-TAT-TTT-------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2864 31 +      5455 GCCATT--AA--CTC--T-------G--AT---GA-A-TAT-TTTTTTCTGG
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1247 31 +      3576 GCCATT--AA--CTC--T-------G--AT---GA-A-TAT-TATTTCCTGG
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            61086 31 +   2246927 GCCAAT--AA--C--TCT-------G--AC---AA-A-TAT-TATTTTGTGG
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532896 31 -  12879189 GCCAAT--AA--CGC--T-------G--AC---AA-A-TAT-CATTTTCTGG
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811195 31 +  35494412 GCCAAT--AA--C--TCT-------G--AT---GA-A-TAT-TATTTTCTGG
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8627924 31 +  20541912 GCTAAT--AA--C--TCT-------G--GT---GA-A-TAT-CATTTTCTGG
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669424 31 +   1390856 TCCAAT--AA--C--CCT-------A--AC---AA-A-TAT-TACTTTCTGA
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2499 31 +    198055 GCCAAT--AA--C--CCT-------A--AC---AA-A-TAT-TACTTTCTGG
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34287 31 +     67921 GCCATT--AA--TTC--T-------G--AT---GA-A-TGT-TGTTTTCTGG
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18895820 27 +  37912305 AACAAT--AA--C----T-------G--AC---ag-a-tat-tattt--tgt
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  12030 27 +     14536 AACAAT--AA--C----T-------G--AC---AT-G-TAT-TATTT--TGT
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31504 17 -     42551 GCCATT--AA--CTC--T-------G--AT---GA-----------------
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 I 11
s Eidolon_helvum.KE759718.1                                   7430 31 +     11740 GCCAGT--AA--C--TCT-------G--AT---AA-G-TAT-TATTTCCTGA
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310296 31 +    607251 GTCAAT--AA--C--TCT-------G--AT---GA-A-TAC-CATTTTCTGG
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1089018 31 +  10337057 ATCAAT--AA--C----T-------CTGAC---AA-C-CAT-TATTTTATCA
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16325783 24 -  41312741 GCCAAT--AA--C----T-------C--AGAC-AA-A-TAT-TTT-------
i Enhydra_lutris.KZ291758.1                              C 0 I 3
s Eptesicus_fuscus.JH977646.1                              2144081 15 -  14770903 GCCAAT--AA--C--TCT-------G--AT----------------------
i Eptesicus_fuscus.JH977646.1                            C 0 I 9
s Equus_asinus.JREZ01000139.1                              1279766 31 +   4378816 GCCAAT--AA--C--Tct-------a--ac---aa-a-tat-tattttccGG
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527587 31 -  39960074 GCCAAT--AA--C--Tct-------a--ac---aa-a-tat-tattttcccg
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29602 31 +    498745 GCCAAT--AA--C--Tct-------a--ac---aa-a-tat-tattttcccg
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3325355 30 -   7059049 GTCAGT--AA--C----T------TG--GA---AA-A-TAT-TGTTTCCTAG
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21199940 38 -  21539334 CTCAAT--AG--CTC--TGACCACTG--AC---CA-A-TAT-TATTTTCTAG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10871 31 +    133382 GCCAAT--AA--C--TCT-------G--AT---GA-A-TAT-TATTTTCTGG
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24808 31 -     44125 GCCAAT--AA--C--TCT-------G--AT---GA-A-TAT-TATTTTCTGG
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.AANG03299807.1                                   412 24 -       507 GCCAAT--Ag--c----t-------c--agga-aa-a-tat-ttt-------
i Felis_catus.AANG03299807.1                             C 0 C 0
s Felis_catus_fca126.CM031415.1                           20191990 24 + 205367284 GCCAAT--Ag--c----t-------c--agga-aa-a-tat-ttt-------
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  5515 24 -     36744 GCCAAT--AG--C----T-------C--AGGA-AA-A-TAT-TTT-------
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             848514 31 +   3816255 GCCATG--AA--CTC--T-------G--AT---CG-A-TAT-TATTTTCTgg
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galagoides_demidoff.k141_31856                              3212  5 -      3432 gccat-----------------------------------------------
i Galagoides_demidoff.k141_31856                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25478 31 +     26054 GCCAGC--AT--TTC--T-------G--AT---TA-A-TAT-TATTTTCTGC
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30363 31 +     49224 GACATT--AA--CTC--T-------G--AC---AA-A-TAT-TATTTTCTAG
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              10569 31 -     32273 GCCAAT--AA--CTC--T-------G--AC---AA-A-TAT-TATTTTCTGG
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186332719 31 + 186649187 GCCAAT--AA--CTC--t-------g--ac---aa-a-tat-tattttctgg
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   30090 31 +     78134 GACATT--AA--CTC--T-------G--AC---AA-T-TAT-TATTTTCTGG
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238152 24 +    327341 GCCAGT--AG--C----T-------C--AGGC-AA-A-TAT-TTT-------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17496 16 +     36099 GTCAGT--AA--C--TCT-------G--AT---G------------------
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 I 12
s Heterocephalus_glaber.JH602082.1                        20659393 31 +  22651954 GCCATG--AA--CTC--t-------g--at---ga-a-tat-tattttatgg
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 255 31 +       961 GCCAGT--AATTC----T-------G--AC---AA-C-TACT-ATTTCATGG
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112051 31 +    128679 GCCAAT--AA--C--TCT-------G--AT---GA-G-TAT-TATTTTCTGG
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108389 31 +   1711038 GCTAAT--AA--C--ACT-------G--AT---GA-G-TAT-TATTTCCTGG
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39830 31 +     43066 GCTAAT--AA--C--ACT-------G--AT---GA-G-TAT-TATTTCCTGG
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    429468 23 +    630532 ------------CTA--T-------G--TT---AT-A-TAT-TATTTTCTGG
i Hoolock_leuconedys.ctg274                                 I 200 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40617 24 +     55795 GCCAAT--AG--C----T-------C--AGGC-AA-A-TAC-TTT-------
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19862 31 -    143317 GCCATT--AA--CTC--T-------G--AT---GA-A-TAT-TATATTCTGG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_307679                               12391 31 -     15490 GCCAGT--AA--CTC--T-------G--AC---AT-A-TAT-TATTTTCTGG
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              54396 31 +     67168 GCCAGT--AA--CTC--T-------G--AC---AT-A-TAT-TATTTTCTGG
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189538048 31 - 191637585 GCCAGT--AA--CTC--T-------G--AC---AT-A-TAT-TATTTTCTGG
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3330941 31 -  11177569 GCCAGT--AA--CTC--T-------G--AC---AT-A-TAT-TATTTTCTGG
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80936 31 +    135385 GCCATT--AA--CTC--C-------G--AT---GA-A-CAT-TATTTTCTGG
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514598 31 -   7955117 GACATG--AA--ATC--T-------G--AC---AA-A-TAG-TATTTTCTGC
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   18168 31 +     31101 GCCAGT--AA--CTC--T-------G--AC---AA-A-TTT-CATTTTCTGG
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22412 31 +     23964 GCCAAT--AA--C--TCT-------G--AT---GA-A-TAT-GATTTTCTGG
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271383 27 -   9596543 GATAAT--AA--A----T-------G--AT---ATTA-TA----TTTTATGG
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1679 31 -      3359 GCCAAT--AA--C--TCT-------G--AT---GA-A-TAT-TATTTTCTGG
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    12260 15 -     42476 GCCAAT--AA--C--TCT-------G--AT----------------------
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 9
s Lepilemur_ankaranensis.k141_596936                          6802 31 -     23766 GCCAAT--AA--CTC--T-------G--AC---AA-A-TAT-CATTTTCTGG
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24749 31 +     45836 GCCAAT--AA--CTC--T-------G--AC---AA-A-TAT-CATTTTCTGG
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31660 33 -     32627 GCCAAT--AAAACTC--T-------G--AC---AA-A-TAT-CATTTTCTGG
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      22804 31 +     54090 GCCAAT--AA--CTC--T-------G--AC---AA-A-TAT-CATTTTCTGG
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3036119 24 +   3914936 GACAAT--AA--C----T-------C--ag-acaa-a-tat-ttt-------
i Leptonychotes_weddellii.KB714746.1                     C 0 I 3
s Lipotes_vexillifer.KE559953.1                             267490 31 -    662738 GCCAAT--AA--C--TCT-------G--AT---GA-A-TAT-TATTTTCTGG
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1431466 31 +   1826925 CTCAGT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Lophocebus_aterrimus.ctg367                            C 0 I 279
s Loris_lydekkerianus.k141_2539221                             696 31 +     11245 GCCATC--AA--CTC--T-------G--AC---AA-A-TAC-CAGTTTCTAA
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999532 31 +   6120653 GCCATC--AA--CTC--T-------G--AC---AA-A-TAC-CAGTTTCTAA
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214528 29 -  43346337 GCCGAT--AA--C----T-------G--AC---AA-C-TATT-TTTCTGTGA
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951736 10 -  59628241 GCCAAT--Aa--c----t----------------------------------
i Lycaon_pictus.CM007581.1                               C 0 I 10
s Macaca_arctoides.k141_2326796                               1650 31 +     40492 CTCAAT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670910 31 +  60120075 CTCAAT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7408 31 -     26193 CTCAAT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75202 31 -    114318 CTCAAT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   921 31 -     23192 CTCAAT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10374 31 -     29190 CTCAAT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18941 31 +     37952 CTCAAT--AG--CTC--T-------G--AC---CA-G-TAT-TATTTTCTAG
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834029 31 + 187317192 CTCAAT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452590 31 -  25927173 CTCAAT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74790 31 +     89720 CTCAAT--AG--CTC--T-------G--AC---CA-G-TAT-TATTTTCTAG
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1787 31 +     20474 CTCAAT--AG--CTC--T-------G--AC---CG-A-TAT-TATTTTCTAG
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1588 31 -     14993 CTCAAT--AG--CTC--T-------G--AC---CA-G-TAT-TATTTTCTAG
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324461 31 -    668171 CTCAAT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15730 31 -     15935 CTCAAT--AG--CTC--T-------G--AC---CG-A-TAT-TATTTTCTAG
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20527 31 -     45290 CTCAAT--AG--CTC--T-------G--AC---CA-G-TAT-TATTTTCTAG
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87576 16 +     94391 GCCAGT--AA--C--TCT-------G--AT---G------------------
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23932082 31 -  24302211 CTCAGC--AG--CTC--T-------G--AC---CA-A-TAT-TCTTTTCTAG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346260 31 +    752769 CTCAGC--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15621 29 +    737560 GCCAAT--AA--C----T-------G--AC---AA-A-TAT-TATTTTCTGG
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              47010 29 -    317179 GCCAAT--AA--C----t-------g--ac---aa-a-tat-tattttctgG
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097448 31 -  40650429 GAGATT--AA--ATC--t-------g--ac---aa-a-tat-tattttctgc
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6791 31 -    207569 GCTAAT--TA--C--TCT-------G--AT---GA-G-TAT-TATTTTCTGG
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6250 24 +     13704 GCCAAT--AA--C----T-------C--AGAC-AA-A-TAT-TTC-------
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 3
s Mesoplodon_bidens.MesBid_scaffold_108144                    3080 31 +     10310 GTCAAT--AA--C--TCT-------G--AT---GA-A-TAT-TATTTTCTGG
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18283328 31 -  93316391 GCCAAT--AA--CTC--T-------G--AC---AA-A-TAT-CATTTTCTGG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13435 31 -     19307 GCCAAT--AA--C--TCT-------G--GT---GA-A-TAC-TATTTTCTGG
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849109 30 +   8254450 GCCAGT--AA--C--TCT-------A--GT---GG-G-TAT-CAT-TTCTGG
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             32985 30 +     64694 GCCAGT--AA--C--TCT-------A--GT---GG-G-TAT-CAT-TTCTGG
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3817 38 -     28506 CTCAAT--AG--CTC--TGACCACTG--AC---CA-A-TAT-TATTTTCTAG
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62449 24 -     63350 GCCAGT--AA--C----T-------C--AGAC-AA-A-TAT-TTT-------
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 I 3
s Mirza_zaza.k141_952172                                      4682 31 -     37649 GCCAAT--AA--CTC--T-------G--AC---AA-A-TAT-CATTTTCTGG
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26585 31 -    437263 GCCAAT--AA--C--TCT-------G--AT---GA-A-TAT-TATTTTCTGG
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137841 31 -    366855 GCCAGT--AA--C--TCT-------G--GT---GC-A-TAT-TATTCCCTGG
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_61429                  27434 31 -     27816 GTCAAT--AA--C--TCT-------G--AT---GA-A-TAC-CATTTTCTGG
i Moschus_moschiferus.MosMos_scaffold_61429              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31353 24 +     37127 GTCAGT--AG--C----T-------C--AGGC-AA-A-TAT-TTT-------
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5135 31 +     14753 GCCAAT--TA--C--TCT-------G--AT---GA-A-TAT-TATTTTCTGG
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2356 30 +     14296 GACATT--AA--CTC--T-------G--A----AA-A-TAT-TATTTTCTGG
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               297681 24 -  14710649 GCCAAT--AA--C----T-------C--AGAC-AA-A-TAT-TTT-------
i Mustela_putorius.JH418006.1                            C 0 I 3
s Myotis_brandtii.KE162005.1                                278305 31 -  10118263 GCCAAT--AT--T--TCT-------G--AT---GA-A-TAT-TATTTTCTGG
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585862 31 -   6019432 GCCAGT--AA--T--TCT-------G--AT---GA-A-TAT-TATTTTCTGG
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902071 31 -   4330536 GCCAAT--AA--C--TCT-------G--AT---GA-A-TAT-TATTTTCTGG
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32630 31 +     33610 GCCGAT--AA--T--TCT-------G--AT---GA-A-TAT-TATTTCCTGG
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186128 25 +    196477 --------AA--C--TCA-------G--GC---AA-A-TAC-TATTTTATGG
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 2 C 0
s Nannospalax_galili.KL204047.1                            2025524 26 -   3037898 GTCAAT--AA--C----T-------G--AC---AA-A-TA----TTATCTAG
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                                9830 31 +     21681 CTCAAT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865541 31 +   7148211 GCCAAT--AA--C--TCT-------G--AT---GA-A-TAT-TATTTTCTGG
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756405 31 +    783361 GCCAAT--AA--C--TCT-------G--AT---GA-A-CAT-GACCCTCTGA
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9145997 10 -   9404916 GCCAAT--Aa--c----t----------------------------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 10
s Nycticebus_bengalensis.LG01                            102574500 31 - 196305487 GCCATC--AA--CTC--T-------G--AC---AA-A-TAC-CAGTTTCTAG
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2186 31 +      8486 GCCATC--AA--CTC--T-------G--AC---AA-A-TAC-CAGTTTCTAG
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744927 31 + 199412804 GCCATC--AA--CTC--T-------G--AC---AA-A-TAC-CAGTTTCTAG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355765 31 +   3988456 ACCAAT--AG--CTC--A-------G--GT---AA-A-CAC-TATTTTCTGA
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              500738 24 -   2017862 GCCAAT--AA--C----T-------C--AGAC-AA-A-TAT-TTT-------
i Odobenus_rosmarus.KB229312.1                           C 0 I 3
s Odocoileus_virginianus.KZ100018.1                         144668 31 +    630418 GTCAAT--AA--C--TCT-------A--AT---GA-A-TAC-CATTTTCTGG
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  2781456 31 -  10937097 GCCAAT--AA--C--TCT-------G--AT---GA-A-TAT-TATTTTCTGG
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6856 28 -     18566 ---AAT--AA--C----T-------T--CA---GC-AATTGTTATTTTGTGG
i Orycteropus_afer.OryAfe_flattened_line_144387          I 3 C 0
s Pan_paniscus.KQ411613.1                                    38709  9 +     80009 -------------------------------------------attttctgg
i Pan_paniscus.KQ411613.1                                I 90 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458751 10 -    559221 GCCAAT--AA--c----t----------------------------------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 10
s Ovis_aries.CM001607.2                                   17585027 16 +  44047080 GTCAGT--AA--C--TCT-------G--AT---G------------------
i Ovis_aries.CM001607.2                                  C 0 I 12
s Ovis_canadensis.OviCan_scaffold_2572                      173448 16 -    191736 GTCAGT--AA--C--TCT-------G--AT---G------------------
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 I 12
s Pan_troglodytes.CM009242.2                             189137582 31 + 189151597 GCCAAT--AA--CTc--t-------g--ac---aa-a-tat-tattttctgg
i Pan_troglodytes.CM009242.2                             n 577 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  147137 24 +    230217 GCCAAT--AG--C----T-------C--AGGA-AA-A-TAT-TTT-------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                259846 24 +  18783137 GCCAAT--Ag--c----t-------c--agga-aa-a-tat-ttt-------
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4716993 24 -   8748460 GCCAAT--Ag--c----t-------c--agga-aa-a-tat-ttt-------
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1264381 16 -   2937107 GTCAAT--AA--C--TCT-------G--GT---G------------------
i Pantholops_hodgsonii.KE114653.1                        C 0 I 12
s Papio_anubis.CM001495.2                                183437404 31 + 183742232 CTCAGT--AG--CTC--T-------G--AC---ca-a-tat-tattttctag
i Papio_anubis.CM001495.2                                C 0 I 465
s Papio_cynocephalus.k141_4307930                             1562 31 +     20448 CTCAGT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20558088 31 +  20919399 CTCAGT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Papio_hamadryas.Contig39                               C 0 I 279
s Papio_kindae.k141_1936966                                    305 31 +     41871 CTCAGT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     3591 31 +     27711 CTCAGT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  3490 31 +      9205 CTCAGT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Papio_ursinus.k141_3428135                             C 0 I 186
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8872 24 -     78924 GCTGAT--AG--C----T-------C--AGGA-AA-A-TAT-TTT-------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            4682 31 +     13100 GCCATA--AA--CTC--T-------G--AC---AA-A-TAC-CAGTTTCTGG
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             3050 31 +     25941 GCCATA--AA--CTC--T-------G--AC---AA-A-TAC-CAGTTTCTGG
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25316 16 +     32600 ---------------------------------AG-A-TAT-GATTTCTTGT
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25860 31 -     29689 GCCATC--AA--CTC--T-------G--AT---GA-A-TAT-TATTTTCTGG
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8503 31 +     63832 GCCAAT--AA--C--TCT-------G--AT---GA-A-TAT-TATTTTCTGG
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38346 31 +     62158 CTCAAT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33073 31 +     89929 CTCAAT--AG--CTT--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34489 31 +     51399 CTCAAT--AG--CTT--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290710 31 -  14605196 CTCAAT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              455 15 +     22620 GACAAT--AA--T--TCT-------G--AT----------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 16
s Platanista_gangetica.PlaMin_flattened_line_32310           34209 31 +     35617 GCCAAT--AA--C--TCT-------G--AT---GA-A-TAT-TATTTTCTGG
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189125763 31 + 189387572 GCCAGT--AA--CTC--T-------G--AC---AT-G-TAT-tattttctgg
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9565367 31 +   9816681 GCCAGT--AA--CTC--T-------G--AC---AT-G-TAT-TATTTTCTGG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               67990 31 -     81375 CTCAAT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9817 31 +     10147 CTCAAT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 10016 31 -     22811 GCCAGT--AATTC----T-------G--AC---AA-C-TACT-ATTTCATGG
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986379 31 +   2598838 GCCAAT--AA--CTC--T-------g--ac---aa-a-ttt-cattttctgg
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          24668 31 +     38485 GCCAAT--AA--CTC--T-------G--AC---AA-A-TTT-CATTTTCTGG
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                              829 31 +      4256 GCCAAT--AA--CTC--T-------G--AC---AA-A-TTT-CATTTTCTGG
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22187 31 +     35766 GCCAAT--AA--CTC--T-------G--AC---AA-A-TTT-CATTTTCTGG
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            370 31 -     24134 GCCAAT--AA--CTC--T-------G--AC---AA-A-TTT-CATTTTCTGG
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24182 31 -     67325 GCCAAT--AA--CTC--T-------G--AC---AA-A-TTT-CATTTTCTGG
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            427 31 -      6182 GCCAAT--AA--CTC--T-------G--AC---AA-A-TTT-CATTTTCTGG
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11228 30 -     21811 GCCAAT--AA--G--TCT-------G--AT---GA-G-TAT-TGTTT-CTGG
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36692 24 +     42204 GCCAAT--AA--C----A-------C--AAAC-AA-A-TAT-TTT-------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 3
s Pteropus_alecto.KB030862.1                              22973699 31 +  28871421 GCCAGT--AA--C--TCT-------G--AT---GA-G-TAT-TATTTCCCCg
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1636 31 -      8028 GCCAGT--AA--C--TCT-------G--AT---GA-G-TAT-TATTTCCTGg
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20270304 24 -  38429054 GCCAAT--Ag--c----t-------c--agga-aa-a-tat-ttt-------
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                              9819 31 -     91421 CTCAAT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603953 31 +   7812017 CTCAAT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9792 31 -     72585 CTCAAT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4916 31 +     55207 GTCAAT--AA--C--TCT-------A--AT---GA-A-TAC-CATTTTCTGG
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        366934 31 -   3329780 GCTAAT--CA--C--TCT-------G--AT---GA-G-CAC-TATTTTCtgg
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             1505 31 -     11128 CTCAAT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230862 31 - 195417433 CTCAAT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7666510 31 +   7961872 CTCAAT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84685 31 -     96226 GCTAGT--AA--C--TCT-------G--AT---GA-G-TAT-TATTTCCTGA
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3569 16 +      4321 GCCAAT--AA--C--TCT-------G--AT---G------------------
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 I 12
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151381 31 -    313613 GCCAGTAGCT--C----T-------G--AT---GA-A-CAT-GACTTTCTGG
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          14334 31 -     19888 CTCAAT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21539 31 +     39453 CTCAAT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2063 31 +     27826 CTCAAT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1585 31 -     19483 CTCAAT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1647 31 +      7198 CTCAAT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9907 31 +     15514 CTCAAT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187706 25 -    191337 GTCAAT--AA--C----T-------G--AT---GT-A-TAT-TTT-TTC---
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 I 1
s Sorex_araneus.JH798187.1                                13647046 19 -  18376816 -------------------------G--AT---GA-A-TAT-CATATTCTGA
i Sorex_araneus.JH798187.1                               I 10 I 12
s Spermophilus_dauricus.KZ294078.1                         1948240 31 -   3870691 GACATG--AA--ATC--t-------g--ac---aa-a-tat-tattttctgc
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27234 23 +     97271 GCCAAA--AA--C----T-------C--A-AC-AA-A-TAT-TTT-------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 3
s Suricata_suricatta.SurSur_flattened_line_6629              14222 24 -    196729 GCCAGT--AG--C----T-------C--AGGC-AA-A-TAT-TTT-------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   62882475 31 -  69701581 GCCAAT--GA--C--Act-------t--at---ga-a-tat-tattttatgg
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1088089 31 -   1523678 GCCAGC--AA--CTC--T-------G--AC---AT-A-TAT-TATTTTCTGG
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6838 16 +     41958 GCCAAC--AA--C--TCT-------G--AT---G------------------
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 10
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69490 25 +    116680 --------AA--C--TCG-------G--GC---AG-A-TAC-TATTTTATTG
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 2 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115221 31 -    156842 TCCAAT--AA--C--TCT-------A--AC---AT-A-TAT-TATTTTCTGA
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383676 31 +    539355 GCCAAT--AA--C--TCT-------A--AC---AT-A-TAT-TATTTTCTGG
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10680 19 +     70052 -------------------------G--AC---AA-A-TAT-TGTTTCCTGG
i Tarsius_lariang.k141_2201908                           I 10 C 0
s Tarsius_wallacei.k141_780063                               14985 19 +     25099 -------------------------G--AC---AA-A-TAT-TGTTTCCTGG
i Tarsius_wallacei.k141_780063                           I 10 C 0
s Theropithecus_gelada.CM009954.1                        186422913 31 + 186847797 CTCAGT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103202 31 +    114563 GCCATG--AA--CTC--T-------G--AT---GA-A-TAT-TATTCTCTGG
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   1883 20 +      8208 -----------------T-------G--AC---AA-A-TAT-TATTTTGTGG
i Tolypeutes_matacus.TolMat_scaffold_228639              I 9 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     78979 31 +    610378 GCCAAT--AA--C--TCT-------G--GT---GA-A-TAG-TATTTTCTGG
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          5641 31 -     20410 CTCAAT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9836 31 +     15221 CTCAAT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5741 31 +     19930 CTCAAT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2171 31 -     19997 CTCAAT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42290 31 -     60166 CTCAAT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9762 31 -     27529 CTCAAT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9702 31 -     18194 CTCAAT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3438 31 -     21137 CTCAAT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2140 31 -     10723 CTCAAT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1293 31 +      9834 CTCAAT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19611 31 +     32220 CTCAAT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933708 31 +   6242583 CTCAAT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2953 31 +     20839 CTCAAT--AG--CTC--T-------G--AC---CA-A-TAT-TATTTTCTAG
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    686 29 -      1748 GTCAGT--AA--C----T-------G--AT---GA-A-TAC-CATTTTCTGG
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 C 0
s Tupaia_chinensis.KB320699.1                              2149632 30 +   4065304 GCCAT---AA--CTC--T-------G--GT---GA-A-TAT-AATTTTCTGG
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     3223 30 -     10553 GCCAT---AA--CTC--T-------G--GT---GA-A-TGT-AATTTTCTGG
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737703 31 +  33153633 GCCAAT--AA--C--TCT-------G--AT---GA-A-TAT-TATTTTCTGG
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_97021                    1934 29 -      4736 ATCAAT--AA--C----C-------G--AT---GA-A-CAT-GGCTTTCTAG
i Uropsilus_gracilis.UroGra_scaffold_97021               C 0 C 0
s Ursus_maritimus.KK499267.1                               4846935 24 -   5085361 GCCAAT--AA--C----T-------C--AAAC-AA-A-GAT-TTT-------
i Ursus_maritimus.KK499267.1                             C 0 I 3
s Vicugna_pacos.KN270157.1                                 5368407 31 -   5488506 GCCAAC--AA--C--TGT-------G--AT---GA-C-TAT-TATTTTCTGG
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7412 10 -     43706 GCCAAT--AA--C----T----------------------------------
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 10
s Xerus_inauris.XerIna_scaffold_48378                        19735 31 -     24430 GCCATT--AA--CTC--T-------G--AC---AA-A-TAT-TGTTTTCTGG
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1860 24 +      2932 GCCAAT--AA--C----T-------C--AGAC-AA-A-TAT-TTT-------
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 I 3
s Zapus_hudsonius.ZapHud_scaffold_11398                      10016 26 +     63895 GAAAAT--AA--C----T-------G--AC---AA-A-TA----TTTTGTGG
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11395 31 +     12536 GCCAAT--AA--C--TCT-------G--AT---GA-A-TAT-TATTTTCTGG
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    15418  9 -    145209 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1368 5 +     62944 ATATt
s Acinonyx_jubatus.LLWD01001279.1                           823314 5 -   1699592 ctatt
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507027 5 -  29979442 ctatt
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 3 C 0
s Ailurus_fulgens.LNAC01001112.1                             75251 5 -    347723 ctatt
i Ailurus_fulgens.LNAC01001112.1                         I 3 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     65030 5 -     89534 TTATA
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9362 5 -     52922 ATATT
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9289 5 -     28001 ATATT
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9415 5 -      9772 ATATT
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            572 5 -     12518 ATATT
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675202 5 -   2318259 GTACT
i Ammotragus_lervia.NIVO01071767.1                       I 12 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183154 5 +    412891 CTATT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97657 5 -    100397 GTACT
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7311 5 +     20879 CTATA
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14480 2 +     17124 A---T
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2506 5 +     43469 CTATT
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  49339 5 -     92717 ATATT
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              49964 5 +     85213 ATATT
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191590 5 +  23207421 GTATT
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2056 5 -     18090 GTATT
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26124 5 +     34529 GTACT
i Beatragus_hunteri.BeaHun_scaffold_50177                I 12 C 0
s Bison_bison.KN261452.1                                    199166 5 -    288883 GTACT
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20272371 5 +  48749331 GTACT
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1124931 5 -   1948126 GTACT
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18083009 5 +  45695690 GTACT
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2818498 5 +   4408762 GTACT
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998947 5 -  17673402 GTATT
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331411 5 -   7040546 GTATT
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399687 5 -   1652518 GTATT
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795808 5 -  60362399 CTGTT
i CanFam4.chr16                                          I 10 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181865 5 -    185531 CTGTT
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 10 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031252 5 -   9314153 ctgtt
i Canis_lupus_dingo.QKWQ01000480.1                       I 10 C 0
s Canis_lupus_familiaris.chr16                            17955516 5 -  59632846 ctgtt
i Canis_lupus_familiaris.chr16                           I 10 C 0
s Canis_lupus_orion.HG994398.1                            18496817 5 +  63665305 ctgtt
i Canis_lupus_orion.HG994398.1                           I 10 C 0
s Capra_aegagrus.CM003241.1                               18829320 5 +  46296322 GTACT
i Capra_aegagrus.CM003241.1                              I 12 C 0
s Capra_hircus.CM004588.1                                 18060040 5 -  44709034 GTACT
i Capra_hircus.CM004588.1                                I 12 C 0
s Carlito_syrichta.NW_007259797.1                           141084 5 -    496798 aTATT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2924 5 -     11696 CTGTT
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133687 5 +    179628 TTATA
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89297 5 +    217609 GTAAT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18347510 5 -  23392119 TTAGA
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18359770 5 -  23407841 TTAGA
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98647 5 +    143979 TTACA
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         5000 5 -      8605 ATATT
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227922 5 +  27778364 TTATA
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2640 5 -      3715 TTATA
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470326 5 +   4669795 ATATT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8875 5 -     19203 ATATT
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3294 5 +      8260 ATATT
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3524 5 +     27781 ATATT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3677 5 -     20310 ATATT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6661 5 +     29689 ATATT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            1014 5 +      9989 ATATT
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9349 5 -     27936 ATATT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9368 5 -     11289 ATATT
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811744 5 +  39242232 ATATT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217435 5 -  21565898 ATATT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34555 5 -     53127 ATATT
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1847 5 +      7159 ATATT
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9360 5 -     27947 ATATT
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9336 5 +     17596 ATATT
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39830 5 -     41420 ATATT
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4847 5 -      6351 TTATT
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16757 5 -     52598 ATATT
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12106 5 +     57038 ATATT
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1248540 5 +   2543920 TTATA
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18423299 5 -  18827391 ATATT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9742 5 -     50209 ATATT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416747 5 + 135778131 ATATT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15206 5 +     19366 TTGTC
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170305 5 +    839153 TTGTC
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1905269 5 +   2368649 ATATT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944939 5 + 200372422 ATATT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31808 5 +     84244 ATATT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17546030 5 -  53390261 CAACT
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10540 5 -     20389 CTATA
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_287352               410 5 +      4208 CATTT
i Crocidura_indochinensis.CroInd_scaffold_287352         C 0 I 126
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24258 5 -     87169 CTATT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2895 5 +      5455 TTATA
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1278 5 +      3576 TTATA
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            61117 5 +   2246927 TTATT
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532927 5 -  12879189 ATATT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811226 5 +  35494412 GTATT
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8627955 5 +  20541912 CTAta
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669455 5 +   1390856 CTATA
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2530 5 +    198055 TTATA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34318 5 +     67921 TTATA
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18895847 5 +  37912305 ttata
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  12057 5 +     14536 TTATA
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31532 5 -     42551 TTATA
i Dolichotis_patagonum.DolPat_scaffold_30833             I 11 C 0
s Eidolon_helvum.KE759718.1                                   7461 5 +     11740 CTATT
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310327 5 +    607251 GTACT
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1089049 5 +  10337057 TTATT
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16325810 5 -  41312741 CTACT
i Enhydra_lutris.KZ291758.1                              I 3 C 0
s Eptesicus_fuscus.JH977646.1                              2144105 5 -  14770903 CTATT
i Eptesicus_fuscus.JH977646.1                            I 9 C 0
s Equus_asinus.JREZ01000139.1                              1279797 5 +   4378816 TTATA
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527618 5 -  39960074 TTATA
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29633 5 +    498745 TTATA
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3325385 5 -   7059049 AAATT
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21199978 5 -  21539334 ATATT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10902 5 +    133382 GTATT
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24839 5 -     44125 GTATT
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.AANG03299807.1                                   436 5 -       507 ctatt
i Felis_catus.AANG03299807.1                             C 0 C 0
s Felis_catus_fca126.CM031415.1                           20192014 5 + 205367284 ctatt
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  5539 5 -     36744 CTATT
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             848545 5 +   3816255 ttata
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25509 4 +     26054 TTAT-
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30394 5 +     49224 TTATA
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              10600 5 -     32273 ATATT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186332750 5 + 186649187 atatt
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   30121 5 +     78134 TTATA
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238176 5 +    327341 CTATT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17524 5 +     36099 GTACT
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 12 C 0
s Heterocephalus_glaber.JH602082.1                        20659424 5 +  22651954 tGATA
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 286 5 +       961 TTATT
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112082 5 +    128679 GTATT
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108420 5 +   1711038 CTATT
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39861 5 +     43066 CTATT
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    429491 5 +    630532 ATATT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40641 5 +     55795 CTATT
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19893 5 -    143317 TTATA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_307679                               12422 5 -     15490 ATATT
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              54427 5 +     67168 ATATT
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189538079 5 - 191637585 ATATT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3330972 5 -  11177569 ATATT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80967 5 +    135385 TTATA
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514629 5 -   7955117 Ctata
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 1
s Indri_indri.k141_3655594                                   18199 5 +     31101 ATGTT
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22443 5 +     23964 GTATT
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271410 5 -   9596543 TTAta
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1710 5 -      3359 GTATT
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    12284 5 -     42476 CTATT
i Lasiurus_borealis.LasBor_scaffold_32767                I 9 C 0
s Lepilemur_ankaranensis.k141_596936                          6833 5 -     23766 ATATT
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24780 5 +     45836 ATATT
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31693 5 -     32627 ATATT
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      22835 5 +     54090 ATATT
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3036146 5 +   3914936 ctatt
i Leptonychotes_weddellii.KB714746.1                     I 3 C 0
s Lipotes_vexillifer.KE559953.1                             267521 3 -    662738 GTA--
i Lipotes_vexillifer.KE559953.1                          C 0 I 15
s Lophocebus_aterrimus.ctg367                              1431776 5 +   1826925 AAACT
i Lophocebus_aterrimus.ctg367                            I 279 T 101
s Loris_lydekkerianus.k141_2539221                             727 5 +     11245 ATATT
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999563 5 +   6120653 ATATT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214557 5 -  43346337 TTATT
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951756 5 -  59628241 ctgtt
i Lycaon_pictus.CM007581.1                               I 10 C 0
s Macaca_arctoides.k141_2326796                               1681 5 +     40492 ATATT
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670941 5 +  60120075 ATATT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7439 5 -     26193 ATATT
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75233 5 -    114318 ATATT
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   952 5 -     23192 ATATT
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10405 5 -     29190 ATATT
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18972 5 +     37952 ATATT
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834060 5 + 187317192 ATATT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452621 5 -  25927173 ATATT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74821 5 +     89720 ATATT
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1818 5 +     20474 ATATT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1619 5 -     14993 ATATT
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324492 5 -    668171 ATATT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15761 5 -     15935 ATATT
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20558 5 -     45290 ATATT
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23932113 5 -  24302211 ATATT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346291 5 +    752769 ATATT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15650 5 +    737560 CTATT
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              47039 5 -    317179 CTATT
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097479 5 -  40650429 ctATA
i Marmota_marmota.CZRN01000018.1                         C 0 I 1
s Megaderma_lyra.MegLyr_scaffold_4542                         6822 5 -    207569 CTATC
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6277 5 +     13704 CTACC
i Mellivora_capensis.MelCap_flattened_line_69365         I 3 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3111 5 +     10310 GTATT
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18283359 5 -  93316391 ATATT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13466 5 -     19307 CTATT
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849139 5 +   8254450 CTATT
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             33015 5 +     64694 CTATT
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3855 5 -     28506 ATATT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62476 5 -     63350 CTATT
i Mirounga_angustirostris.MirAng_flattened_line_22144    I 3 C 0
s Mirza_zaza.k141_952172                                      4713 5 -     37649 ATATT
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26616 5 -    437263 GTATT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137872 2 -    366855 TT---
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_61429                  27465 5 -     27816 GTACt
i Moschus_moschiferus.MosMos_scaffold_61429              C 0 N 0
s Mungos_mungo.MunMun_flattened_line_23663                   31377 5 +     37127 CTATA
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5166 5 +     14753 CTATT
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2386 5 +     14296 TTATA
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               297708 5 -  14710649 CTACT
i Mustela_putorius.JH418006.1                            I 3 C 0
s Myotis_brandtii.KE162005.1                                278336 5 -  10118263 CTATT
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585893 5 -   6019432 CTATT
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902102 5 -   4330536 CTATT
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32661 5 +     33610 CTATT
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186153 5 +    196477 TTATT
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025550 5 -   3037898 CTATG
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                                9861 5 +     21681 ATATT
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865572 5 +   7148211 GTATT
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756436 5 +    783361 CTATT
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146017 5 -   9404916 ctgtt
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 10 C 0
s Nycticebus_bengalensis.LG01                            102574531 5 - 196305487 ATATT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2217 5 +      8486 ATATT
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744958 5 + 199412804 ATATT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355796 5 +   3988456 CTAGT
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              500765 5 -   2017862 CTATT
i Odobenus_rosmarus.KB229312.1                           I 3 C 0
s Odocoileus_virginianus.KZ100018.1                         144699 5 +    630418 GTACT
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  2781487 5 -  10937097 GTATT
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               6884 5 -     18566 TTATT
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 I 221
s Otocyon_megalotis.JAEUCK010005147.1                       458771 5 -    559221 ctgtt
i Otocyon_megalotis.JAEUCK010005147.1                    I 10 C 0
s Ovis_aries.CM001607.2                                   17585055 5 +  44047080 GTACT
i Ovis_aries.CM001607.2                                  I 12 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173476 5 -    191736 GTACT
i Ovis_canadensis.OviCan_scaffold_2572                   I 12 C 0
s Pan_paniscus.KQ411613.1                                    38718 5 +     80009 atatt
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189137613 5 + 189151597 atatt
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  147161 5 +    230217 CTATT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                259870 5 +  18783137 ctatt
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4717017 5 -   8748460 ctatt
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1264409 5 -   2937107 GTACT
i Pantholops_hodgsonii.KE114653.1                        I 12 C 0
s Papio_anubis.CM001495.2                                183437900 5 + 183742232 ATATT
i Papio_anubis.CM001495.2                                I 465 T 101
s Papio_cynocephalus.k141_4307930                             1593 5 +     20448 ATATT
i Papio_cynocephalus.k141_4307930                        C 0 T 101
s Papio_hamadryas.Contig39                                20558398 5 +  20919399 ATATT
i Papio_hamadryas.Contig39                               I 279 T 101
s Papio_kindae.k141_1936966                                    336 5 +     41871 ATATT
i Papio_kindae.k141_1936966                              C 0 T 101
s Papio_papio.k141_802527                                     3622 5 +     27711 ATATT
i Papio_papio.k141_802527                                C 0 T 101
s Papio_ursinus.k141_3428135                                  3707 5 +      9205 ATATT
i Papio_ursinus.k141_3428135                             I 186 I 3
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8896 5 -     78924 CTATT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            4713 5 +     13100 ATATT
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             3081 5 +     25941 ATATT
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25332 5 +     32600 TTATA
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25891 5 -     29689 TTATA
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8534 5 +     63832 GTATT
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38377 5 +     62158 ATATT
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33104 5 +     89929 ATATT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34520 5 +     51399 ATATT
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290741 5 -  14605196 ATATT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              486 5 +     22620 CTATT
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 16 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34240 5 +     35617 GTATT
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189125794 5 + 189387572 atatt
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9565398 5 +   9816681 ATATT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68021 5 -     81375 ATATT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9848 5 +     10147 ATATT
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 10047 5 -     22811 TTATT
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986410 5 +   2598838 atATT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          24699 5 +     38485 ATATT
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                              860 5 +      4256 ATATT
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22218 5 +     35766 ATATT
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            401 5 -     24134 ATATT
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24213 5 -     67325 ATATT
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            458 5 -      6182 ATATT
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11258 5 -     21811 CTGTT
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36719 5 +     42204 CTACT
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 3 C 0
s Pteropus_alecto.KB030862.1                              22973730 5 +  28871421 ctatt
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1667 5 -      8028 ctatt
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20270328 5 -  38429054 ctatt
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                              9850 5 -     91421 ATATT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603984 5 +   7812017 ATATT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9823 5 -     72585 ATATT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4947 5 +     55207 GTACT
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        366965 5 -   3329780 ctatt
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             1536 5 -     11128 ATATT
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230893 5 - 195417433 ATATT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7666541 5 +   7961872 ATATT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84716 5 -     96226 CTATT
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3597 5 +      4321 GTACC
i Saiga_tatarica.SaiTat_scaffold_373180                  I 12 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151412 5 -    313613 CAATT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          14365 5 -     19888 ATATT
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21570 5 +     39453 ATATT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2094 5 +     27826 ATATT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1616 5 -     19483 ATATT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1678 5 +      7198 ATATT
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9938 5 +     15514 ATATT
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sorex_araneus.JH798187.1                                13647077 5 -  18376816 tgtat
i Sorex_araneus.JH798187.1                               I 12 C 0
s Spermophilus_dauricus.KZ294078.1                         1948271 5 -   3870691 ctata
i Spermophilus_dauricus.KZ294078.1                       C 0 I 1
s Spilogale_gracilis.SpiGra_flattened_line_13525             27260 5 +     97271 CCAGT
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 3 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14246 5 -    196729 CTATA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   62882506 5 -  69701581 atatt
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1088120 5 -   1523678 ATATT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6864 5 +     41958 CTAAT
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 10 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69515 5 +    116680 TTATT
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115252 5 -    156842 TCATT
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383707 5 +    539355 CCATT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10699 5 +     70052 ACATT
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               15004 5 +     25099 ATATT
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422944 5 + 186847797 ATATT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103233 5 +    114563 TTATA
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   1903 5 +      8208 TTCTT
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     79010 5 +    610378 CTATT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          5672 5 -     20410 ATATT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9867 5 +     15221 ATATT
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5772 5 +     19930 ATATT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2202 5 -     19997 ATATT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42321 5 -     60166 ATATT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9793 5 -     27529 ATATT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9733 5 -     18194 ATATT
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3469 5 -     21137 ATATT
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2171 5 -     10723 ATATT
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1324 5 +      9834 ATATT
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19642 5 +     32220 ATATT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933739 5 +   6242583 ATATT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2984 5 +     20839 ATATT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    715 5 -      1748 GTTCT
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 C 0
s Tupaia_chinensis.KB320699.1                              2149662 5 +   4065304 TTCTT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     3253 5 -     10553 TTCTT
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737734 5 +  33153633 GTATT
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_97021                    1963 5 -      4736 CAATT
i Uropsilus_gracilis.UroGra_scaffold_97021               C 0 C 0
s Ursus_maritimus.KK499267.1                               4846962 5 -   5085361 TTATT
i Ursus_maritimus.KK499267.1                             I 3 C 0
s Vicugna_pacos.KN270157.1                                 5368438 5 -   5488506 GTGTT
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7432 5 -     43706 CTGTT
i Vulpes_lagopus.VulLag_flattened_line_30954             I 10 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19766 5 -     24430 CTATA
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1887 5 +      2932 CTATT
i Zalophus_californianus.ZalCal_flattened_line_63728     I 3 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      10042 5 +     63895 CTAAC
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11426 5 +     12536 GTATT
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Varecia_variegata.k141_1128296                              7155 0 +     24756 C
e Varecia_rubra.k141_590885                                   7107 0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Solenodon_paradoxus.SolPar_flattened_line_5840            187731 1 -    191337 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414 0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    15418 9 -    145209 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Macroglossus_sobrinus.MacSob_scaffold_8222                 87592 0 +     94391 C
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Lemur_catta.scaffold_24                                 15519761 0 -  30322482 C
e Hapalemur_occidentalis.k141_907772                          9234 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402 0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298 0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517 0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galagoides_demidoff.k141_31856                              3217 0 -      3432 C
e Eulemur_sanfordi.k141_1122526                               9432 0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267 0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247 0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321 0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369 0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369 0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184 0 -     25546 C
e Eulemur_collaris.k141_377015                                2154 0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453 0 -     14127 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1373 3 +     62944 aa------a
s Acinonyx_jubatus.LLWD01001279.1                           823319 3 -   1699592 ac------a
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507032 3 -  29979442 ac------a
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             75256 3 -    347723 ac------a
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     65035 3 -     89534 AT------A
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9367 3 -     52922 AA------A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9294 3 -     28001 AA------A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9420 3 -      9772 AA------A
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            577 3 -     12518 AA------A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675207 3 -   2318259 AC------A
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183159 2 +    412891 AT-------
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97662 3 -    100397 AC------A
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7316 3 +     20879 AT------A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14482 3 +     17124 CC------A
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2511 3 +     43469 AT------A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  49344 3 -     92717 AC------A
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              49969 3 +     85213 AC------A
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191595 3 +  23207421 AC------A
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 36
s Balaenoptera_bonaerensis.DF707048.1                         2061 3 -     18090 AC------A
i Balaenoptera_bonaerensis.DF707048.1                    C 0 I 36
s Beatragus_hunteri.BeaHun_scaffold_50177                    26129 3 +     34529 AC------A
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    199171 3 -    288883 AC------A
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20272376 3 +  48749331 AC------A
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1124936 3 -   1948126 AC------A
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18083014 3 +  45695690 AC------A
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2818503 3 +   4408762 AC------A
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998952 3 -  17673402 AC------A
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331416 3 -   7040546 AC------A
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399692 3 -   1652518 AC------A
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795813 3 -  60362399 AT------A
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181870 3 -    185531 AT------A
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031257 3 -   9314153 at------a
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955521 3 -  59632846 at------a
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496822 3 +  63665305 at------a
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18829325 3 +  46296322 AC------A
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18060045 3 -  44709034 AC------A
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           141089 3 -    496798 AT------A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2929 3 -     11696 AT------A
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133692 3 +    179628 AT------G
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89302 2 +    217609 AC-------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 1
s Cavia_aperea.AVPZ01000300.1                             18347515 3 -  23392119 AT------A
i Cavia_aperea.AVPZ01000300.1                            C 0 I 5
s Cavia_porcellus.DS562891.1                              18359775 3 -  23407841 AT------A
i Cavia_porcellus.DS562891.1                             C 0 I 5
s Cavia_tschudii.CavTsc_scaffold_8919                        98652 3 +    143979 GT------A
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 I 5
s Cephalopachus_bancanus.k141_2037105                         5005 3 -      8605 AT------A
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227927 3 +  27778364 AT------A
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2645 3 -      3715 AT------A
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470331 3 +   4669795 AA------A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8880 3 -     19203 AA------A
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3299 3 +      8260 AA------A
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3529 3 +     27781 AA------A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3682 3 -     20310 AA------A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6666 3 +     29689 AA------A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            1019 3 +      9989 AA------A
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9354 3 -     27936 AA------A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9373 3 -     11289 AA------A
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811749 3 +  39242232 AA------A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217440 3 -  21565898 AA------A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34560 3 -     53127 AA------A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1852 3 +      7159 AA------A
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9365 3 -     27947 AA------A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9341 3 +     17596 AA------A
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39835 3 -     41420 AA------A
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4852 3 -      6351 AT------A
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16762 3 -     52598 AC------A
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12111 3 +     57038 AC------A
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1248545 3 +   2543920 AT------A
i Chinchilla_lanigera.JH722012.1                         C 0 I 6
s Chlorocebus_aethiops.ctg25                              18423304 3 -  18827391 AA------A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9747 3 -     50209 AA------A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416752 3 + 135778131 AA------A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15211 3 +     19366 AT------T
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170310 3 +    839153 AT------T
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1905274 3 +   2368649 AA------A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944944 3 + 200372422 AA------A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31813 3 +     84244 AA------A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17546035 3 -  53390261 AC------A
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10545 2 -     20389 AT-------
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 16
s Crocidura_indochinensis.CroInd_scaffold_109268              7599 3 +      9948 AC------A
i Crocidura_indochinensis.CroInd_scaffold_109268         I 53 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24263 3 -     87169 AC------A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2900 3 +      5455 GT------A
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 I 6
s Dasyprocta_punctata.DasPun_flattened_line_206793            1283 3 +      3576 AT------A
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 I 6
s Dasypus_novemcinctus.JH564415.1                            61122 3 +   2246927 AG------A
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532932 3 -  12879189 AC------T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811231 3 +  35494412 AC------A
i Delphinapterus_leucas.KZ290073.1                       C 0 I 36
s Desmodus_rotundus.KZ672289.1                             8627960 3 +  20541912 at------a
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669460 3 +   1390856 AT------A
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2535 3 +    198055 AT------A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34323 3 +     67921 AT------A
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 6
s Dipodomys_ordii.KN672350.1                              18895852 2 +  37912305 at-------
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  12062 3 +     14536 AT------A
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31537 3 -     42551 AT------A
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 I 6
s Eidolon_helvum.KE759718.1                                   7466 3 +     11740 AT------A
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310332 3 +    607251 AC------A
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1089054 3 +  10337057 GT------A
i Elephantulus_edwardii.JH947257.1                       C 0 I 2
s Enhydra_lutris.KZ291758.1                               16325815 3 -  41312741 Ac------a
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144110 3 -  14770903 AC------A
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279802 3 +   4378816 AT------A
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527623 3 -  39960074 AT------A
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29638 3 +    498745 AT------A
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3325390 1 -   7059049 G--------
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21199983 3 -  21539334 AA------A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10907 3 +    133382 AC------A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 36
s Eubalaena_japonica.EubJap_flattened_line_31514             24844 3 -     44125 AC------A
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 I 36
s Felis_catus.AANG03299807.1                                   441 3 -       507 ac------a
i Felis_catus.AANG03299807.1                             C 0 C 0
s Felis_catus_fca126.CM031415.1                           20192019 3 + 205367284 ac------a
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  5544 3 -     36744 AC------A
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             848550 3 +   3816255 at------a
i Fukomys_damarensis.KN121974.1                          C 0 I 4
s Glis_glis.GliGli_scaffold_19807                            30399 3 +     49224 AT------A
i Glis_glis.GliGli_scaffold_19807                        C 0 I 1
s Gorilla_beringei.k141_3596273                              10605 3 -     32273 AA------A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186332755 3 + 186649187 aa------a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   30126 3 +     78134 AC------A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238181 3 +    327341 AC------A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17529 3 +     36099 AC------A
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20659429 3 +  22651954 AT------A
i Heterocephalus_glaber.JH602082.1                       C 0 I 6
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 291 3 +       961 AT------A
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112087 3 +    128679 AC------A
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108425 2 +   1711038 AT-------
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 1
s Hipposideros_galeritus.HipGal_scaffold_29171               39866 2 +     43066 AT-------
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 I 1
s Hoolock_leuconedys.ctg274                                    429496 3 +    630532 AA------A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40646 3 +     55795 AC------A
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19898 3 -    143317 AT------A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 7
s Hylobates_agilis.k141_307679                               12427 3 -     15490 AA------A
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              54432 3 +     67168 AA------A
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189538084 3 - 191637585 AA------A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3330977 3 -  11177569 AA------A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80972 3 +    135385 AT------A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 6
s Ictidomys_tridecemlineatus.JH393364.1                    7514635 1 -   7955117 --------a
i Ictidomys_tridecemlineatus.JH393364.1                  I 1 C 0
s Indri_indri.k141_3655594                                   18204 3 +     31101 AC------A
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22448 3 +     23964 AC------A
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 I 36
s Jaculus_jaculus.JH725527.1                               8271415 3 -   9596543 at------a
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1715 3 -      3359 AC------A
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 I 36
s Lasiurus_borealis.LasBor_scaffold_32767                    12289 3 -     42476 AC------A
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6838 3 -     23766 AC------A
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24785 3 +     45836 AC------A
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31698 3 -     32627 AC------A
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      22840 3 +     54090 AC------A
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3036151 3 +   3914936 gc------a
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                              1431680 3 +   1826925 TA------G
i Lophocebus_aterrimus.ctg367                            T 101 I 194
s Loris_lydekkerianus.k141_2539221                             732 3 +     11245 CC------A
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999568 3 +   6120653 CC------A
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214562 3 -  43346337 AT------A
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951761 3 -  59628241 at------a
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               1686 3 +     40492 AA------A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670946 3 +  60120075 AA------A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7444 3 -     26193 AA------A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75238 3 -    114318 AA------A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   957 3 -     23192 AA------A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10410 3 -     29190 AA------A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18977 3 +     37952 AA------A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834065 3 + 187317192 AA------A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452626 3 -  25927173 AA------A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74826 3 +     89720 AA------A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1823 3 +     20474 AA------A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1624 3 -     14993 AA------A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324497 3 -    668171 AA------A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15766 3 -     15935 AA------A
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20563 3 -     45290 AA------A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23932118 3 -  24302211 AA------A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346296 3 +    752769 AA------A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15655 3 +    737560 AT------A
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              47044 3 -    317179 AT------A
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097485 1 -  40650429 --------A
i Marmota_marmota.CZRN01000018.1                         I 1 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6827 2 -    207569 AT-------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 16
s Mellivora_capensis.MelCap_flattened_line_69365              6282 3 +     13704 AC------A
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3116 3 +     10310 AC------A
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 I 36
s Microcebus_murinus.CM007674.1                           18283364 3 -  93316391 AC------A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    15427 3 -    145209 AT------A
i Microgale_talazaci.MicTal_scaffold_6613                I 9 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13471 3 -     19307 AT------A
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849144 3 +   8254450 AT------T
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             33020 3 +     64694 AT------A
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3860 3 -     28506 AA------A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62481 3 -     63350 GC------A
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      4718 3 -     37649 AC------A
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26621 3 -    437263 AC------A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 36
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137874 1 -    366855 --------A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                    384 2 +     82753 -C------A
i Moschus_moschiferus.MosMos_scaffold_13123              N 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31382 3 +     37127 AC------A
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5171 3 +     14753 AC------A
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2391 3 +     14296 AT------A
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               297713 3 -  14710649 AC------A
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                278341 3 -  10118263 AC------A
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585898 3 -   6019432 AC------A
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902107 3 -   4330536 GC------A
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32666 3 +     33610 AC------A
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186158 3 +    196477 AT------A
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025555 9 -   3037898 ATGCATaaa
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                                9866 3 +     21681 AA------A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865577 3 +   7148211 AC------A
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 36
s Noctilio_leporinus.NocLep_scaffold_251                    756441 3 +    783361 AT------A
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146022 3 -   9404916 at------a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102574536 3 - 196305487 CC------A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2222 3 +      8486 CC------A
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744963 3 + 199412804 CC------A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355801 3 +   3988456 AT------A
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              500770 3 -   2017862 AC------A
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         144704 3 +    630418 AC------A
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  2781492 3 -  10937097 GC------A
i Orcinus_orca.KB316932.1                                C 0 I 36
s Orycteropus_afer.OryAfe_flattened_line_144387               7110 3 -     18566 at------a
i Orycteropus_afer.OryAfe_flattened_line_144387          I 221 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458776 3 -    559221 at------a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17585060 3 +  44047080 AC------A
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173481 3 -    191736 AC------A
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    38723 3 +     80009 aa------a
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189137618 3 + 189151597 aa------a
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  147166 3 +    230217 AC------A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                259875 3 +  18783137 ac------a
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4717022 3 -   8748460 ac------a
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1264414 3 -   2937107 AC------A
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183437804 3 + 183742232 ta------g
i Papio_anubis.CM001495.2                                T 101 I 101
s Papio_cynocephalus.k141_4307930                             1497 3 +     20448 TA------G
i Papio_cynocephalus.k141_4307930                        T 101 I 101
s Papio_hamadryas.Contig39                                20558302 3 +  20919399 TA------G
i Papio_hamadryas.Contig39                               T 101 I 101
s Papio_kindae.k141_1936966                                    240 3 +     41871 TA------G
i Papio_kindae.k141_1936966                              T 101 I 101
s Papio_papio.k141_802527                                     3526 3 +     27711 TA------G
i Papio_papio.k141_802527                                T 101 I 101
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8901 3 -     78924 AC------A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            4718 3 +     13100 CC------A
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             3086 3 +     25941 CC------A
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25337 3 +     32600 AT------A
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25896 3 -     29689 AC------A
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 I 6
s Phocoena_phocoena.PhoPho_flattened_line_24159               8539 3 +     63832 AC------A
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 36
s Piliocolobus_badius.k141_1234363                           38382 3 +     62158 AA------A
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33109 3 +     89929 AA------A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34525 3 +     51399 AA------A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290746 3 -  14605196 AA------A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              491 3 +     22620 AC------A
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34245 3 +     35617 CC------A
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 I 36
s Pongo_abelii.CM009266.2                                189125799 3 + 189387572 aa------a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9565403 3 +   9816681 AA------A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68026 3 -     81375 AA------A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9853 3 +     10147 AA------A
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 10052 3 -     22811 AT------A
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986415 3 +   2598838 AC------A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          24704 3 +     38485 AC------A
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                              865 3 +      4256 AC------A
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22223 3 +     35766 AC------A
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            406 3 -     24134 AC------A
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24218 3 -     67325 AC------A
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            463 3 -      6182 AC------A
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11263 3 -     21811 AC------A
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36724 3 +     42204 AC------A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973735 3 +  28871421 at------a
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1672 3 -      8028 at------a
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20270333 3 -  38429054 ac------a
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                              9855 3 -     91421 AA------A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603989 3 +   7812017 AA------A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9828 3 -     72585 AA------A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4952 3 +     55207 AC------A
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        366970 2 -   3329780 ag-------
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 1
s Rhinopithecus_bieti.k119_217274                             1541 3 -     11128 AA------A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230898 3 - 195417433 AA------A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7666546 3 +   7961872 AA------A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84721 3 -     96226 AT------A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3602 3 +      4321 GC------A
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151417 3 -    313613 AT------A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          14370 3 -     19888 AA------A
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21575 3 +     39453 AA------A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2099 3 +     27826 AA------A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1621 3 -     19483 AA------A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1683 3 +      7198 AA------A
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9943 3 +     15514 AA------A
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sorex_araneus.JH798187.1                                13647082 3 -  18376816 at------a
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1948277 1 -   3870691 --------a
i Spermophilus_dauricus.KZ294078.1                       I 1 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27265 3 +     97271 AC------A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14251 3 -    196729 AC------A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   62882511 3 -  69701581 aa------a
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1088125 3 -   1523678 AA------A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6869 3 +     41958 AT------A
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69520 3 +    116680 AT------A
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115257 3 -    156842 AT------A
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383712 3 +    539355 AT------A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10704 3 +     70052 AT------A
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               15009 3 +     25099 AT------A
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422949 3 + 186847797 AA------A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103238 3 +    114563 AT------A
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 6
s Tolypeutes_matacus.TolMat_scaffold_228639                   1908 3 +      8208 AT------A
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     79015 3 +    610378 AT------A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          5677 3 -     20410 AA------A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9872 3 +     15221 AA------A
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5777 3 +     19930 AA------A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2207 3 -     19997 AA------A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42326 3 -     60166 AA------A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9798 3 -     27529 AA------A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9738 3 -     18194 AA------A
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3474 3 -     21137 AA------A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2176 3 -     10723 AA------A
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1329 3 +      9834 AA------A
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19647 3 +     32220 AA------A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933744 3 +   6242583 AA------A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2989 3 +     20839 AA------A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    720 3 -      1748 AC------A
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 C 0
s Tupaia_chinensis.KB320699.1                              2149667 3 +   4065304 GA------A
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     3258 3 -     10553 GA------A
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737739 3 +  33153633 AT------A
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 36
s Uropsilus_gracilis.UroGra_scaffold_97021                    1968 3 -      4736 AT------A
i Uropsilus_gracilis.UroGra_scaffold_97021               C 0 I 47
s Ursus_maritimus.KK499267.1                               4846967 3 -   5085361 AC------A
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368443 3 -   5488506 AC------A
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7437 3 -     43706 AT------A
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19771 3 -     24430 AC------A
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1892 3 +      2932 AC------A
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      10047 3 +     63895 AA------A
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11431 3 +     12536 AC------A
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 I 36
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9202 487 -     10935 I
e Varecia_variegata.k141_1128296                              7155 0 +     24756 C
e Varecia_rubra.k141_590885                                   7107 0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Solenodon_paradoxus.SolPar_flattened_line_5840            187731 1 -    191337 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414 0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Papio_ursinus.k141_3428135                                  3712 3 +      9205 I
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Macroglossus_sobrinus.MacSob_scaffold_8222                 87592 0 +     94391 C
e Lipotes_vexillifer.KE559953.1                             267524 15 -    662738 I
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Lemur_catta.scaffold_24                                 15519761 0 -  30322482 C
e Hapalemur_occidentalis.k141_907772                          9234 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402 0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298 0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517 0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_56069               25513 0 +     26054 C
e Galagoides_demidoff.k141_31856                              3217 0 -      3432 C
e Eulemur_sanfordi.k141_1122526                               9432 0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267 0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247 0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321 0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369 0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369 0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184 0 -     25546 C
e Eulemur_collaris.k141_377015                                2154 0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453 0 -     14127 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1376  7 +     62944 ca-------------ca---------aa-----c
s Acinonyx_jubatus.LLWD01001279.1                           823322  3 -   1699592 cA-------------T------------------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507035  3 -  29979442 ca-------------t------------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             75259  3 -    347723 ca-------------t------------------
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     65038  3 -     89534 AA-------------C------------------
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9370  6 -     52922 CA-------------C----------AA-----C
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9297  6 -     28001 CA-------------C----------AA-----C
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9423  6 -      9772 CA-------------C----------AA-----C
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            580  6 -     12518 CA-------------C----------AA-----C
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675210  7 -   2318259 CA-------------C----------AAA----T
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183161  4 +    412891 --------------------------AAA----C
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97665  7 -    100397 CA-------------C----------AAA----C
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7319  7 +     20879 CA-------------C----------AAA----C
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14485  7 +     17124 CA-------------C----------AAA----C
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2514  7 +     43469 CA-------------T----------AAA----C
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  49347  7 -     92717 CA-------------T----------AAA----C
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              49972  7 +     85213 CA-------------T----------AAA----C
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191634  7 +  23207421 ca-------------t----------AAA----c
i Balaenoptera_acutorostrata.KI537508.1                  I 36 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2100  7 -     18090 CA-------------T----------AAA----c
i Balaenoptera_bonaerensis.DF707048.1                    I 36 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26132  7 +     34529 CA-------------C----------AAA----T
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    199174  7 -    288883 CA-------------C----------AAA----T
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20272379  7 +  48749331 CA-------------C----------AAA----T
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1124939  7 -   1948126 CA-------------C----------AAA----T
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18083017  7 +  45695690 CA-------------C----------AAA----T
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2818506  7 +   4408762 CA-------------C----------AAA----T
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998955  7 -  17673402 CA-------------T----------AAA----C
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331419  7 -   7040546 CA-------------T----------AAA----C
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399695  7 -   1652518 CA-------------T----------AAA----C
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795816  3 -  60362399 CG-------------T------------------
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181873  3 -    185531 CG-------------T------------------
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031260  3 -   9314153 CG-------------T------------------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955524  3 -  59632846 CG-------------T------------------
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496825  3 +  63665305 CG-------------T------------------
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18829328  7 +  46296322 CA-------------C----------AAA----T
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18060048  7 -  44709034 CA-------------C----------AAA----T
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           141092  7 -    496798 CA-------------C----------AAA----T
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2932  7 -     11696 CA-------------T----------AAA----C
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133695  7 +    179628 CA-------------T----------AA----GC
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89305  1 +    217609 ---------------------------------C
i Catagonus_wagneri.CatWag_scaffold_2839                 I 1 C 0
s Cavia_aperea.AVPZ01000300.1                             18347523  7 -  23392119 CC-------------T----------ACA----T
i Cavia_aperea.AVPZ01000300.1                            I 5 C 0
s Cavia_porcellus.DS562891.1                              18359783  7 -  23407841 CC-------------T----------ACA----T
i Cavia_porcellus.DS562891.1                             I 5 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98660  7 +    143979 CC-------------T----------ACA----T
i Cavia_tschudii.CavTsc_scaffold_8919                    I 5 C 0
s Cephalopachus_bancanus.k141_2037105                         5008  7 -      8605 CA-------------C----------AAA----T
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227930  7 +  27778364 CA-------------C----------AAA----C
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2648  7 -      3715 CA-------------C----------AAA----C
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470334  6 +   4669795 ca-------------c----------aa-----c
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8883  6 -     19203 CA-------------C----------AA-----C
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3302  6 +      8260 CA-------------C----------AA-----C
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3532  6 +     27781 CA-------------C----------AA-----C
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3685  6 -     20310 CA-------------C----------AA-----C
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6669  6 +     29689 CA-------------C----------AA-----C
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            1022  6 +      9989 CA-------------C----------AA-----C
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9357  6 -     27936 CA-------------C----------AA-----C
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9376  6 -     11289 CA-------------C----------AA-----C
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811752  6 +  39242232 CA-------------C----------AA-----C
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217443  6 -  21565898 CA-------------C----------AA-----C
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34563  6 -     53127 CA-------------C----------AA-----C
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1855  6 +      7159 CA-------------C----------AA-----C
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9368  6 -     27947 CA-------------C----------AA-----C
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9344  6 +     17596 CA-------------C----------AA-----C
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39838  6 -     41420 CA-------------C----------AA-----C
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4855  7 -      6351 CA-------------C----------AAA----C
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16765  7 -     52598 CA-------------C----------AAA----C
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12114  7 +     57038 CA-------------C----------AAA----C
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1248554  7 +   2543920 CC-------------T----------AAA----T
i Chinchilla_lanigera.JH722012.1                         I 6 C 0
s Chlorocebus_aethiops.ctg25                              18423307  6 -  18827391 CA-------------C----------AA-----C
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9750  6 -     50209 CA-------------C----------AA-----C
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416755  6 + 135778131 ca-------------c----------aa-----c
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15214  7 +     19366 AA-------------T----------ATA----C
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170313  7 +    839153 AA-------------T----------ATA----C
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_172426               9689  4 -     10935 --------------------------AA----GA
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          I 487 C 0
s Colobus_angolensis.KN981557.1                            1905277  6 +   2368649 ca-------------c----------aa-----c
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944947  6 + 200372422 CA-------------C----------AA-----C
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31816  6 +     84244 CA-------------C----------AA-----C
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17546038  5 -  53390261 CA-------------G----------AA------
i Condylura_cristata.JH655891.1                          C 0 I 3
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10563  2 -     20389 ---------------T----------A-------
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 16 C 0
s Crocidura_indochinensis.CroInd_scaffold_109268              7602  7 +      9948 TA-------------C----------AAA----C
i Crocidura_indochinensis.CroInd_scaffold_109268         C 0 I 11
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24266  3 -     87169 CA-------------T------------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2909  7 +      5455 CC-------------T----------AAA----T
i Cuniculus_paca.CunPac_flattened_line_231100            I 6 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1292  7 +      3576 CC-------------T----------CAA----T
i Dasyprocta_punctata.DasPun_flattened_line_206793       I 6 C 0
s Dasypus_novemcinctus.JH564415.1                            61125  7 +   2246927 AA-------------T----------AA----GC
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532935  7 -  12879189 CA-------------C----------AAA----T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811270  7 +  35494412 CA-------------T----------AAA----C
i Delphinapterus_leucas.KZ290073.1                       I 36 C 0
s Desmodus_rotundus.KZ672289.1                             8627963  7 +  20541912 ca-------------t----------aa----ac
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669463 10 +   1390856 CA---CCA-------C----------AAA----C
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2538  7 +    198055 CA-------------C----------AAA----C
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34332  7 +     67921 CA-------------T----------AAA----T
i Dinomys_branickii.DinBra_scaffold_21862                I 6 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  12065  7 +     14536 CA-------------C----------AAA----T
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31546  7 -     42551 CG-------------T----------ACA----T
i Dolichotis_patagonum.DolPat_scaffold_30833             I 6 C 0
s Eidolon_helvum.KE759718.1                                   7469 17 +     11740 CATAAACATAAGTGCT----------A-------
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310335  7 +    607251 CA-------------C----------AAA----T
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1089059  3 +  10337057 ---------------------------A----GC
i Elephantulus_edwardii.JH947257.1                       I 2 C 0
s Enhydra_lutris.KZ291758.1                               16325818  3 -  41312741 ca-------------t------------------
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144113  7 -  14770903 CA-------------T----------AAA----C
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279805 16 +   4378816 CA-------------A-ACATAATGCAAA----C
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527626 16 -  39960074 CA-------------A-ACATAATGCAAA----C
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29641 16 +    498745 CA-------------A-ACATAATGCAAA----C
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21199986  6 -  21539334 CA-------------C----------AA-----C
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10946  7 +    133382 CA-------------T----------AAA----C
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 36 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24883  7 -     44125 CA-------------T----------AAA----C
i Eubalaena_japonica.EubJap_flattened_line_31514         I 36 C 0
s Felis_catus.AANG03299807.1                                   444  3 -       507 cA-------------T------------------
i Felis_catus.AANG03299807.1                             C 0 C 0
s Felis_catus_fca126.CM031415.1                           20192022  3 + 205367284 cA-------------T------------------
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  5547  3 -     36744 CA-------------T------------------
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             848557  5 +   3816255 ---------------t----------aa----at
i Fukomys_damarensis.KN121974.1                          I 4 C 0
s Glis_glis.GliGli_scaffold_19807                            30403  4 +     49224 --------------------------AGA----T
i Glis_glis.GliGli_scaffold_19807                        I 1 C 0
s Gorilla_beringei.k141_3596273                              10608  7 -     32273 CA-------------CA---------AA-----C
i Gorilla_beringei.k141_3596273                          C 0 I 62
s Gorilla_gorilla.LT578341.1                             186332758  7 + 186649187 ca-------------ca---------aa-----c
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   30129  7 +     78134 CG-------------C----------AAA----T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238184  3 +    327341 CA-------------T------------------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17532  7 +     36099 CA-------------C----------AAA----T
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20659438  7 +  22651954 cc-------------t----------aa----at
i Heterocephalus_glaber.JH602082.1                       I 6 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 294  7 +       961 TA-------------C----------AA----GC
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112090  7 +    128679 CA-------------T----------AAA----C
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hoolock_leuconedys.ctg274                                    429499  7 +    630532 CA-------------CA---------AA-----C
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40649  4 +     55795 TGT------------T------------------
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19908  7 -    143317 CC-------------T----------ACA----T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 7 C 0
s Hylobates_agilis.k141_307679                               12430  7 -     15490 CA-------------TA---------AA-----C
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              54435  7 +     67168 CA-------------TA---------AA-----C
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189538087  7 - 191637585 CA-------------TA---------AA-----C
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3330980  7 -  11177569 CA-------------TA---------AA-----C
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80981  7 +    135385 CA-------------T----------AAA----T
i Hystrix_cristata.HysCri_scaffold_5660                  I 6 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514636  7 -   7955117 ta-------------c----------aa----gc
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   18207  7 +     31101 CA-------------C----------AAA----T
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22487  7 +     23964 CA-------------T----------AAA----C
i Inia_geoffrensis.IniGeo_flattened_line_48101           I 36 C 0
s Jaculus_jaculus.JH725527.1                               8271418  7 -   9596543 ta-------------c----------aa----ac
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1754  7 -      3359 CA-------------T----------AAA----C
i Kogia_breviceps.KogBre_flattened_line_192630           I 36 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    12292  7 -     42476 CA-------------T----------AAA----T
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6841  7 -     23766 CA-------------C----------AAA----C
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24788  7 +     45836 CA-------------C----------AAA----C
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31701  7 -     32627 CA-------------C----------AAA----C
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      22843  7 +     54090 CA-------------C----------AAA----C
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3036154  3 +   3914936 ca-------------t------------------
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             267539  7 -    662738 CA-------------T----------AAA----C
i Lipotes_vexillifer.KE559953.1                          I 15 C 0
s Lophocebus_aterrimus.ctg367                              1431877  6 +   1826925 CA-------------C----------AA-----C
i Lophocebus_aterrimus.ctg367                            I 194 C 0
s Loris_lydekkerianus.k141_2539221                             735  7 +     11245 CA-------------C----------AAA----C
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999571  7 +   6120653 CA-------------C----------AAA----C
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214565  7 -  43346337 TA-------------A----------AA----GC
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951764  3 -  59628241 CG-------------T------------------
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               1689  6 +     40492 CA-------------C----------AA-----C
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670949  6 +  60120075 CA-------------C----------AA-----C
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7447  6 -     26193 CA-------------C----------AA-----C
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75241  6 -    114318 CA-------------C----------AA-----C
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   960  6 -     23192 CA-------------C----------AA-----C
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10413  6 -     29190 CA-------------C----------AA-----C
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18980  6 +     37952 CA-------------C----------AA-----C
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834068  6 + 187317192 ca-------------c----------aa-----c
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452629  6 -  25927173 ca-------------c----------aa-----c
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74829  6 +     89720 CA-------------C----------AA-----C
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1826  6 +     20474 CA-------------C----------AA-----C
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1627  6 -     14993 CA-------------C----------AA-----T
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324500  6 -    668171 CA-------------C----------AA-----C
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15769  6 -     15935 CA-------------C----------AA-----C
i Macaca_thibetana.k99_7456                              C 0 C 0
s Macaca_tonkeana.k141_1498238                               20566  6 -     45290 CA-------------C----------AA-----C
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87592  2 +     94391 ---------------T----------A-------
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23932121  6 -  24302211 CA-------------C----------AA-----C
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346299  6 +    752769 CA-------------C----------AA-----C
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15658  7 +    737560 CA-------------T----------AAA----C
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              47047  7 -    317179 CA-------------T----------AAA----C
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097486  7 -  40650429 TA-------------c----------aa----gc
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6845  2 -    207569 ---------------T----------A-------
i Megaderma_lyra.MegLyr_scaffold_4542                    I 16 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6285  3 +     13704 CA-------------T------------------
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3155  7 +     10310 CA-------------T----------AAA----C
i Mesoplodon_bidens.MesBid_scaffold_108144               I 36 C 0
s Microcebus_murinus.CM007674.1                           18283367  7 -  93316391 CA-------------C----------AAA----C
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    15430  7 -    145209 CA-------------T----------AT----GC
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13474  7 -     19307 CA-------------T----------AAA----C
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849147  7 +   8254450 CA-------------T----------AAA----C
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             33023  7 +     64694 CA-------------T----------AAA----C
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3863  6 -     28506 CA-------------C----------AA-----C
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62484  3 -     63350 CA-------------T------------------
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      4721  7 -     37649 CA-------------C----------AAA----C
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26660  7 -    437263 CA-------------T----------AAA----C
i Monodon_monoceros.MonMon_M_scaffold_103                I 36 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137875  7 -    366855 CA-------------T----------AAA----C
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                    386  7 +     82753 CA-------------C----------AAA----T
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31385  3 +     37127 CA-------------T------------------
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5174  7 +     14753 CA-------------T----------AAA----C
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2394  7 +     14296 CA-------------C----------AAA----T
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               297716  3 -  14710649 CC-------------T------------------
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                278344  7 -  10118263 CA-------------T----------AAA----C
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585901  7 -   6019432 CA-------------T----------AAA----C
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902110  7 -   4330536 CG-------------T----------AAA----C
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32669  7 +     33610 CA-------------T----------AAA----C
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186161  7 +    196477 TA-------------T----------AAA----C
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025564  7 -   3037898 ca-------------c----------aa----at
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                                9869  6 +     21681 CA-------------C----------AA-----C
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865616  7 +   7148211 CA-------------T----------AAA----C
i Neophocaena_asiaeorientalis.KZ687982.1                 I 36 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756444  7 +    783361 CA-------------T----------AAA----C
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146025  3 -   9404916 CG-------------T------------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102574539  7 - 196305487 CA-------------C----------AAA----C
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2225  7 +      8486 CA-------------C----------AAA----C
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744966  7 + 199412804 CA-------------C----------AAA----C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355804  7 +   3988456 CA-------------A----------AAA----C
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              500773  3 -   2017862 CG-------------T------------------
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         144707  7 +    630418 CA-------------C----------AAA----T
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  2781531  7 -  10937097 CA-------------T----------AAA----C
i Orcinus_orca.KB316932.1                                I 36 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               7113  7 -     18566 ca-------------c----------aa----ac
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458779  3 -    559221 CG-------------T------------------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17585063  7 +  44047080 CA-------------C----------AAA----T
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173484  7 -    191736 CA-------------C----------AAA----T
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    38726  7 +     80009 ca-------------ca---------aa-----c
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189137621  7 + 189151597 ca-------------ca---------aa-----c
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  147169  3 +    230217 CT-------------T------------------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                259878  3 +  18783137 cT-------------T------------------
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4717025  3 -   8748460 cA-------------T------------------
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1264417  7 -   2937107 CA-------------C----------AAA----T
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183437908  6 + 183742232 ca-------------c----------aa-----c
i Papio_anubis.CM001495.2                                I 101 C 0
s Papio_cynocephalus.k141_4307930                             1601  6 +     20448 CA-------------C----------AA-----C
i Papio_cynocephalus.k141_4307930                        I 101 C 0
s Papio_hamadryas.Contig39                                20558406  6 +  20919399 CA-------------C----------AA-----C
i Papio_hamadryas.Contig39                               I 101 C 0
s Papio_kindae.k141_1936966                                    344  6 +     41871 CA-------------C----------AA-----C
i Papio_kindae.k141_1936966                              I 101 C 0
s Papio_papio.k141_802527                                     3630  6 +     27711 CA-------------C----------AA-----C
i Papio_papio.k141_802527                                I 101 C 0
s Papio_ursinus.k141_3428135                                  3715  6 +      9205 CA-------------C----------AA-----C
i Papio_ursinus.k141_3428135                             I 3 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8904  3 -     78924 TA-------------T------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            4721  7 +     13100 CA-------------C----------AAA----C
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             3089  7 +     25941 CA-------------C----------AAA----C
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25340  7 +     32600 CA-------------C----------AAA----T
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25905  7 -     29689 CC-------------T----------AGA----T
i Petromus_typicus.PetTyp_scaffold_42190                 I 6 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8578  7 +     63832 CA-------------T----------AAA----C
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 36 C 0
s Piliocolobus_badius.k141_1234363                           38385  6 +     62158 CA-------------C----------AA-----C
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33112  6 +     89929 CA-------------C----------AA-----C
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34528  6 +     51399 CA-------------C----------AA-----C
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290749  6 -  14605196 ca-------------c----------aa-----c
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              494  7 +     22620 CA-------------T----------AAA----C
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34284  7 +     35617 CA-------------T----------AAA----C
i Platanista_gangetica.PlaMin_flattened_line_32310       I 36 C 0
s Pongo_abelii.CM009266.2                                189125802  7 + 189387572 ca-------------ca---------aa-----c
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9565406  7 +   9816681 CA-------------CA---------AA-----C
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68029  6 -     81375 CA-------------C----------AA-----C
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9856  6 +     10147 CA-------------C----------AA-----C
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 10055  7 -     22811 TA-------------C----------AA----GC
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986418  7 +   2598838 TA-------------C----------ACA----C
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          24707  7 +     38485 CA-------------C----------ACA----C
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                              868  7 +      4256 CA-------------C----------ACA----C
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22226  7 +     35766 CA-------------C----------ACA----C
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            409  7 -     24134 CA-------------C----------ACA----C
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24221  7 -     67325 CA-------------C----------ACA----T
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            466  7 -      6182 CA-------------C----------ACA----C
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11266  7 -     21811 CA-------------T----------AAA----T
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36727  3 +     42204 CA-------------T------------------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973738 17 +  28871421 cataaataaaactgct----------a-------
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1675 17 -      8028 cataaatataactgCT----------A-------
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20270336  3 -  38429054 cA-------------T------------------
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                              9858  6 -     91421 CA-------------C----------AA-----C
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603992  6 +   7812017 CA-------------C----------AA-----C
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9831  6 -     72585 CA-------------C----------AA-----C
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4955  7 +     55207 CA-------------C----------AAA----T
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinopithecus_bieti.k119_217274                             1544  6 -     11128 CA-------------C----------AA-----C
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230901  6 - 195417433 ca-------------c----------aa-----c
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7666549  6 +   7961872 CA-------------C----------AA-----C
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84724 17 -     96226 CATAAACATAAGTGCT----------A-------
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3605  7 +      4321 CA-------------C----------AAA----T
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151420  5 -    313613 CA-------------T----------AA------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 2
s Semnopithecus_entellus.k141_11662                          14373  6 -     19888 CA-------------C----------AA-----C
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21578  6 +     39453 CA-------------C----------AA-----C
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2102  6 +     27826 CA-------------C----------AA-----C
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1624  6 -     19483 CA-------------C----------AA-----C
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1686  6 +      7198 CA-------------C----------AA-----C
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9946  6 +     15514 CA-------------C----------AA-----C
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sorex_araneus.JH798187.1                                13647085  7 -  18376816 ta-------------c----------at----at
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1948278  7 -   3870691 ta-------------c----------aa----gc
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27268  3 +     97271 CA-------------G------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14254  3 -    196729 CA-------------T------------------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   62882514 10 -  69701581 ta-------------t----------ta-ttttc
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1088128  7 -   1523678 CA-------------TA---------AA-----C
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6872  7 +     41958 CA-------------T----------AAA----C
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69523  7 +    116680 TA-------------T----------AAA----C
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115260  7 -    156842 CA-------------T----------AAA----C
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383715  7 +    539355 CA-------------T----------AAA----C
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10707  7 +     70052 CA-------------C----------AAA----T
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               15012  7 +     25099 CA-------------C----------AAA----T
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422952  6 + 186847797 ca-------------c----------aa-----c
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103247  7 +    114563 CC-------------T----------GAA----T
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 6 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   1911  7 +      8208 CA-------------C----------AA----GC
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     79018  7 +    610378 CA-------------T----------AAA----C
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          5680  6 -     20410 CA-------------C----------AA-----C
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9875  6 +     15221 CA-------------C----------AA-----C
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5780  6 +     19930 CA-------------C----------AA-----C
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2210  6 -     19997 CA-------------C----------AA-----C
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42329  6 -     60166 CA-------------C----------AA-----C
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9801  6 -     27529 CA-------------C----------AA-----C
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9741  6 -     18194 CA-------------C----------AA-----C
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3477  6 -     21137 CA-------------C----------AA-----C
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2179  6 -     10723 CA-------------C----------AA-----C
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1332  6 +      9834 CA-------------C----------AA-----C
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19650  6 +     32220 CA-------------C----------AA-----C
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933747  6 +   6242583 CA-------------C----------AA-----C
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2992  6 +     20839 CA-------------C----------AA-----C
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    723  7 -      1748 CA-------------T----------GAA----C
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 C 0
s Tupaia_chinensis.KB320699.1                              2149670  7 +   4065304 CA-------------C----------AA----Gc
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     3261  7 -     10553 CA-------------C----------AAA----C
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737778  7 +  33153633 CA-------------T----------AAA----C
i Tursiops_truncatus.MRVK01000835.1                      I 36 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   51575 11 -     77625 CA-------------C----------AAAGTTAT
i Uropsilus_gracilis.UroGra_scaffold_12083               I 84 C 0
s Ursus_maritimus.KK499267.1                               4846970  3 -   5085361 CC-------------T------------------
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368446  7 -   5488506 CA-------------T----------AAA----C
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7440  3 -     43706 CG-------------T------------------
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19774  7 -     24430 CA-------------C----------AA----GC
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1895  3 +      2932 CG-------------T------------------
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      10050  7 +     63895 TA-------------C----------AAA----C
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11470  7 +     12536 ca-------------t----------aa----ac
i Ziphius_cavirostris.ZipCav_flattened_line_71469        I 36 C 0
e Varecia_variegata.k141_1128296                              7155  0 +     24756 C
e Varecia_rubra.k141_590885                                   7107  0 +     50397 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Solenodon_paradoxus.SolPar_flattened_line_5840            187731  1 -    191337 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Rhinolophus_sinicus.LVEH01000134.1                        366972  1 -   3329780 I
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Prolemur_simus.MPIZ01000396.1                            2592414  0 -   4620579 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lemur_catta.scaffold_24                                 15519761  0 -  30322482 C
e Hipposideros_galeritus.HipGal_scaffold_29171               39868  1 +     43066 I
e Hipposideros_armiger.JXIK01000431.1                       108427  1 +   1711038 I
e Hapalemur_occidentalis.k141_907772                          9234  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9402  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9298  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7661  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2517  0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_56069               25513  0 +     26054 C
e Galagoides_demidoff.k141_31856                              3217  0 -      3432 C
e Eulemur_sanfordi.k141_1122526                               9432  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2267  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9247  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6321  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8369  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9629  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8369  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11184  0 -     25546 C
e Eulemur_collaris.k141_377015                                2154  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9453  0 -     14127 C
e Erinaceus_europaeus.JH835339.1                           3325391  0 -   7059049 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Dipodomys_ordii.KN672350.1                              18895854  0 +  37912305 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1383 62 +     62944 a-t-aaatgttaaaaa----tgtttatgttggccaggcgtggtggctcatgcctgtaatcctagcact
s Acinonyx_jubatus.LLWD01001279.1                           823325  9 -   1699592 ----AAGTAT-----T----AA----------------------------------------------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507038  9 -  29979442 ----aagaat-----a----aa----------------------------------------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             75262  9 -    347723 ----atgaat-----a----aa----------------------------------------------
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9376 62 -     52922 A-T-AAATATTTAAAA----TGTTTATATTggccaggcatggtggctcacacctgtaatcccagcact
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9303 62 -     28001 A-T-AAATATTTAAAA----TGTTTATATTggccaggcatggtggctcacacctgtaatcccagcact
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9429 62 -      9772 A-T-AAATATTTAAAA----TGTTTATATTggccaggcatggtggctcacacctgtaatcccagcact
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            586 62 -     12518 A-T-AAATATTTAAAA----TGTTTATATTggccaggcatggtggctcacacctgtaatcccagcact
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675217 11 -   2318259 A-T-AAGTAT-----T----AA----------------------------------------------
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183165 11 +    412891 A-T-AAGTAT-----T----AA----------------------------------------------
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97672 11 -    100397 A-T-AAGTAT-----T----AA----------------------------------------------
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7326  9 +     20879 A-T-AA----------ATATA-----------------------------------------------
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14492 12 +     17124 T-T-AAGTAT-----A----TGT---------------------------------------------
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2521 11 +     43469 A-T-AAGTAT-----T----TA----------------------------------------------
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  49354 12 -     92717 A-T-AAGATT-----A----AGA---------------------------------------------
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              49979 12 +     85213 A-T-AAGATT-----A----AGA---------------------------------------------
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191641 11 +  23207421 a-t-aagtat-----t----aa----------------------------------------------
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2107 11 -     18090 a-t-aagtat-----t----aa----------------------------------------------
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26139 11 +     34529 A-T-AAGTAT-----T----AA----------------------------------------------
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    199181 11 -    288883 A-T-AAGTAT-----T----AA----------------------------------------------
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20272386 11 +  48749331 A-T-AAGTAT-----T----AA----------------------------------------------
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1124946 11 -   1948126 A-T-AAGTAT-----T----AA----------------------------------------------
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18083024 11 +  45695690 A-T-AAGTAT-----T----AA----------------------------------------------
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2818513 11 +   4408762 A-T-AAGTAT-----T----AA----------------------------------------------
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998962 11 -  17673402 A-C-AAGTAT-----T----AA----------------------------------------------
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331426 11 -   7040546 A-C-AAGTAT-----T----AA----------------------------------------------
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399702 11 -   1652518 A-C-AAGTAT-----T----AA----------------------------------------------
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795819  9 -  60362399 ----AAGTAT-----A----AA----------------------------------------------
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181876  9 -    185531 ----AAGTAT-----A----AA----------------------------------------------
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031263  9 -   9314153 ----AAGTAT-----A----AA----------------------------------------------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955527  9 -  59632846 ----AAGTAT-----A----AA----------------------------------------------
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496828  9 +  63665305 ----AAGTAT-----A----AA----------------------------------------------
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18829335 11 +  46296322 A-T-AAGTAT-----T----GA----------------------------------------------
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18060055 11 -  44709034 A-T-AAGTAT-----T----AA----------------------------------------------
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           141099 12 -    496798 G-C-AGGAAT-----A----AAA---------------------------------------------
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2939 11 -     11696 G-T-AAGTAT-----T----AA----------------------------------------------
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133702  5 +    179628 A-T-AA--------------A-----------------------------------------------
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89306 11 +    217609 A-T-AAGTGT-----T----AA----------------------------------------------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18347530  5 -  23392119 A-T-GG--------------A-----------------------------------------------
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18359790  5 -  23407841 A-T-GG--------------A-----------------------------------------------
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98667  5 +    143979 A-T-GG--------------A-----------------------------------------------
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         5015 12 -      8605 G-C-AGGAAT-----A----AAA---------------------------------------------
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227937 11 +  27778364 A-T-AAGTAT-----T----AA----------------------------------------------
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2655 11 -      3715 A-T-AAGTAT-----T----AA----------------------------------------------
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470340 62 +   4669795 a-t-aaatatttaaaa----tgtttatattggccaggcatggtggctcacacctgtaatcccagcact
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8889 62 -     19203 A-T-AAATATTTAAAA----TGTTTATATTggccaggcatggtggctcacacctgtaatcccagcact
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3308 62 +      8260 A-T-AAATATTTAAAA----TGTTTATATTggccaggcatggtggctcacacctgtaatcccagcact
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3538 62 +     27781 A-T-AAATATTTAAAA----TGTTTATATTggccaggcatggtggctcacacctgtaatcccagcact
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3691 62 -     20310 A-T-AAATATTTAAAA----TGTTTATATTggccaggcatggtggctcacacctgtaatcccagcact
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6675 62 +     29689 A-T-AAATATTTAAAA----TGTTTATATTggccaggcatggtggctcacacctgtaatcccagcact
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            1028 62 +      9989 A-T-AAATATTTAAAA----TGTTTATATTggccaggcgtggtggctcctgcctgtaatcccagcact
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9363 62 -     27936 A-T-AAATATTTAAAA----TGTTTATATTggccaggcatggtggctcacacctgtaatcccagcact
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9382 62 -     11289 A-T-AAATATTTAAAA----TGTTTATATTggccaggcatggtggctcacacctgtaatcccagcact
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811758 62 +  39242232 A-T-AAATATTTAAAA----TGTTTATATTggccaggcatggtggctcacacctgtaatcccagcact
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217449 62 -  21565898 A-T-AAATATTTAAAA----TGTTTATATTggccaggcatggtggctcacacctgtaatcccagcact
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34569 62 -     53127 A-T-AAATATTTAAAA----TGTTTATATTggccaggcatggtggctcacacctgtaatcccagcact
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1861 62 +      7159 A-T-AAATATTTAAAA----TGTTTATATTggccaggcatggtggctcacacctgtaatcccagcact
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9374 62 -     27947 A-T-AAATATTTAAAA----TGTTTATATTggccaggcatggtggctcacacctgtaatcccagcact
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9350 62 +     17596 A-T-AAATATTTAAAA----TGTTTATATTggccaggcatggtggctcacacctgtaatcccagcact
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39844 62 -     41420 A-T-AAATATTTAAAA----TGTTTATATTggccaggcatggtggctcacacctgtaatcccagcact
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4862 11 -      6351 A-C-ATGAAT-----G----AA----------------------------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16772 12 -     52598 G-T-AAGATT-----A----AGA---------------------------------------------
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12121 12 +     57038 A-T-AAGATT-----A----AGA---------------------------------------------
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1248561  5 +   2543920 A-T-GA--------------A-----------------------------------------------
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18423313 62 -  18827391 A-T-AAATATTTAAAA----TGTTTATATTggccagacatggtggctcacacctgtaatcccagcact
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9756 62 -     50209 A-T-AAATATTTAAAA----TGTTTATATTggccagacatggtggctcacacctgtaatcccagcact
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416761 62 + 135778131 a-t-aaatatttaaaa----tgtttatattggccagacatggtggctcacacctgtaatcccagcact
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15221 11 +     19366 A-T-AAGAAT-----T----AA----------------------------------------------
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170320 11 +    839153 A-T-AAGAAT-----T----AA----------------------------------------------
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_172426               9693 11 -     10935 A-T-AAATTT-----A----AA----------------------------------------------
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          C 0 C 0
s Colobus_angolensis.KN981557.1                            1905283 62 +   2368649 a-t-aaatatttaaaa----tgtttatgttggccgggcatggtggctcacgcctgtaatcccagcact
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199944953 62 + 200372422 A-T-AAATATTTAAAA----TGTTTATGTTggctgggcatggtggctcacgcctgtaatcccagcact
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              31822 62 +     84244 A-T-AAATATTTAAAA----TGTTTATGTTggctgggcatggtggctcacgcctgtaattccagcact
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17546046 10 -  53390261 --C-TTAGTA-----C----AA----------------------------------------------
i Condylura_cristata.JH655891.1                          I 3 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10565  1 -     20389 ---------------------A----------------------------------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_603213              1125 11 +      1923 A-T-TAAGTG-----T----AA----------------------------------------------
i Crocidura_indochinensis.CroInd_scaffold_603213         I 98 I 296
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24269  9 -     87169 ----AAGTAT-----A----AA----------------------------------------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2916  5 +      5455 A-T-GC--------------A-----------------------------------------------
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1299  5 +      3576 A-T-GG--------------A-----------------------------------------------
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            61132 11 +   2246927 A-T-AAGAAT-----A----AA----------------------------------------------
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532942 12 -  12879189 G-T-AAGTAT-----A----AGA---------------------------------------------
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811277 11 +  35494412 A-T-AAGTAT-----T----AA----------------------------------------------
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8627970 11 +  20541912 a-t-aaatat-----t----aa----------------------------------------------
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669473 11 +   1390856 A-T-AAGTAT-----T----AA----------------------------------------------
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2545 11 +    198055 A-T-AAGTAT-----T----AA----------------------------------------------
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34339  5 +     67921 A-T-GA--------------A-----------------------------------------------
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 1
s Dipodomys_ordii.KN672350.1                              18895854  5 +  37912305 a-c-aa--------------a-----------------------------------------------
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  12072  5 +     14536 A-C-AA--------------A-----------------------------------------------
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31553  5 -     42551 A-T-GG--------------A-----------------------------------------------
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE759718.1                                   7486  1 +     11740 ---------------------A----------------------------------------------
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310342 11 +    607251 A-T-AAGTAT-----T----AA----------------------------------------------
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1089062 10 +  10337057 A-T-AAA-GT-----A----AA----------------------------------------------
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16325821  9 -  41312741 ----aagaat-----a----aa----------------------------------------------
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144120 11 -  14770903 G-T-AAGTAT-----T----AA----------------------------------------------
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279821 11 +   4378816 G-T-AAGTAA-----G----AA----------------------------------------------
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527642 11 -  39960074 G-T-AAGTAA-----G----AA----------------------------------------------
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29657 11 +    498745 G-T-AAGTAA-----G----AA----------------------------------------------
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21199992 62 -  21539334 A-T-AAATATTTAAAA----TGTTTATATTggccaggcatggtggctcacacctgtaatcccagctct
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10953 11 +    133382 A-T-AAGTAT-----T----AA----------------------------------------------
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24890 11 -     44125 A-T-AAGTAT-----T----AA----------------------------------------------
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Eulemur_albifrons.k141_342033                               9453  9 -     14127 -----AGAAT-----A----AGA---------------------------------------------
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                2154  6 -     16928 --------AT-----A----AGA---------------------------------------------
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              11184  9 -     25546 -----AGAAT-----A----AGA---------------------------------------------
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             8369  9 +     26330 -----agAAT-----A----AGA---------------------------------------------
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                  9629  6 +     23973 --------AT-----A----AGA---------------------------------------------
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 8369  9 +     75513 -----agaAT-----A----AGA---------------------------------------------
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  6321  9 +     97555 -----agaAT-----A----AGA---------------------------------------------
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                             9247  9 +     26496 -----AGAAT-----A----AGA---------------------------------------------
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_2367191                                  2267  6 +      2552 --------aT-----A----AGA---------------------------------------------
i Eulemur_rufus.k141_2367191                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                               9432  9 +    111500 -----agaAT-----A----AGA---------------------------------------------
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.AANG03299807.1                                   447  9 -       507 ----AAGTAT-----T----AA----------------------------------------------
i Felis_catus.AANG03299807.1                             C 0 C 0
s Felis_catus_fca126.CM031415.1                           20192025  9 + 205367284 ----AAGTAT-----T----AA----------------------------------------------
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  5550  9 -     36744 ----AAGTAT-----T----AA----------------------------------------------
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             848562  5 +   3816255 a-t-ga--------------a-----------------------------------------------
i Fukomys_damarensis.KN121974.1                          C 0 I 7
s Galeopterus_variegatus.GalVar_scaffold_56069               25513 12 +     26054 A-T-AGGTAT-----A----AAA---------------------------------------------
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30407  5 +     49224 A-T-AA--------------A-----------------------------------------------
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_2022027                               2034 62 +      3305 A-T-AAATATTAAAAA----TGTTTATGTTggccaggcatggtggctcacacctgtaatcctagcact
i Gorilla_beringei.k141_2022027                          I 71 I 241
s Gorilla_gorilla.LT578341.1                             186332765 62 + 186649187 a-t-aaatgttaaaaa----tgtttatgttggccaggcgtggtggctcacgcctgtaatcctagcact
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   30136  4 +     78134 G-T-A---------------A-----------------------------------------------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           2517  9 -     19426 -----agaat-----a----aga---------------------------------------------
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              7661  9 -     15286 -----agaat-----a----aga---------------------------------------------
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                              9298  9 +     18253 -----GGAAT-----A----AGA---------------------------------------------
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                          9402  9 -     41752 -----agaat-----a----aga---------------------------------------------
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                          9234  9 -     16460 -----ggaat-----a----aga---------------------------------------------
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238187  9 +    327341 ----AAGTAT-----A----AA----------------------------------------------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17539 11 +     36099 A-T-AAGTAT-----T----AA----------------------------------------------
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20659445  5 +  22651954 a-t-ga--------------a-----------------------------------------------
i Heterocephalus_glaber.JH602082.1                       C 0 I 7
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 301 11 +       961 A-T-AAATGT-----A----AA----------------------------------------------
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112097 11 +    128679 A-T-AAGTAT-----T----AA----------------------------------------------
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hoolock_leuconedys.ctg274                                    429506 62 +    630532 A-T-AAATATTAAAAA----TGTTTATGTTggccaggcatggtggtttacgccagtaatcccagcact
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40653  9 +     55795 ----AAGTAT-----A----AA----------------------------------------------
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19915  5 -    143317 A-T-AG--------------A-----------------------------------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_307679                               12437 62 -     15490 A-T-AAATATTAAAAA----TGTTTATGTTggccaggcatggtggcttacgccagtaatcccagcact
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              54442 62 +     67168 A-T-AAATATTAAAAA----TGTTTATGTTggccaggcatggtggcttacgccagtaatcccagcact
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189538094 62 - 191637585 A-T-AAATATTAAAAa----tgtttatgttggccaggcatggtggcttatgccagtaatcccagcact
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3330987 62 -  11177569 A-T-AAATATTAAAAa----tgtttatgttggccaggcatggtggcttacgccagtaatcccagcact
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80988  5 +    135385 A-T-GA--------------A-----------------------------------------------
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514643  9 -   7955117 a-t-aa----------atata-----------------------------------------------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   18214 12 +     31101 G-T-AAGATT-----A----AGG---------------------------------------------
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22494 11 +     23964 A-T-AAGTAT-----T----AA----------------------------------------------
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271425  5 -   9596543 a-a-aa--------------a-----------------------------------------------
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1761 11 -      3359 A-T-AAGTAT-----T----AA----------------------------------------------
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    12299 11 -     42476 G-T-AAGTAT-----T----AA----------------------------------------------
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 257
s Lemur_catta.scaffold_24                                 15519761  9 -  30322482 -----AGAAT-----A----AGA---------------------------------------------
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6848 12 -     23766 A-T-AAGATT-----A----ATA---------------------------------------------
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24795 12 +     45836 A-T-AAGATT-----A----ATA---------------------------------------------
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31708 12 -     32627 A-T-AAGATT-----A----ATA---------------------------------------------
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      22850 12 +     54090 A-T-AAGATT-----A----ATA---------------------------------------------
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3036157  9 +   3914936 ----aagaat-----a----aa----------------------------------------------
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             267546 11 -    662738 A-T-AAGTAT-----T----AA----------------------------------------------
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1431883 62 +   1826925 A-T-AAATATTTAAAA----TGTTTATGTTggccaggcatggtggctcacgcctgtaatcccagcact
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             742 12 +     11245 A-T-AAGTAT-----A----TGT---------------------------------------------
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999578 12 +   6120653 A-T-AAGTAT-----A----TGT---------------------------------------------
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214572 11 -  43346337 A-T-AAATAT-----A----AA----------------------------------------------
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951767  9 -  59628241 ----AAGTAT-----A----AA----------------------------------------------
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               1695 62 +     40492 A-T-AAATATTTAAAA----TGTTTATATTggccaggcatggtggctcacacctgtaatcccagcact
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59670955 62 +  60120075 A-T-AAATATTTAAAA----TGTTTATATTggccaggcatggtggctcacacctgtaatcccagcact
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7453 62 -     26193 A-T-AAATATTTAAAA----TGTTTATATTggccaggcatggtggctcacacctgtaatcccagcact
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75247 62 -    114318 A-T-AAATATTTAAAA----TGTTTATATTggccaggcatggtggctcacacctgtaatcccagcact
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                   966 62 -     23192 A-T-AAATATTTAAAA----TGTTTATATTggccaggcatggtggctcacacctgtaatcccagcact
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10419 62 -     29190 A-T-AAATATTTAAAA----TGTTTATATTggccaggcatggtggctcacacctgtaatcccagcact
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  18986 62 +     37952 A-T-AAATATTTAAAA----TGTTTATATTggccaggcatggtggctcacacctgtaatcccagcact
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834074 61 + 187317192 a-t-aaatatttaaaa----tgtttatattggccaggcatggtggctcacacctgta-tcccagcact
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452635 62 -  25927173 a-t-aaatatttaaaa----tgtttatattggccaggcatggtggctcacacctgtaatcccagcact
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74835 62 +     89720 A-T-AAATATTTAAAA----TGTTTATATTggccaggcatggtggctcacacctgtaatcccagcact
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1832 62 +     20474 A-T-AAATATTTAAAA----TGTTTATATTggccaggcatggtggctcacacctgtaatcccagcact
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1633 62 -     14993 A-T-AAATATTTAAAA----TGTTTATATTggccaggcatggtggctcacacctgtaatcccagcact
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324506 62 -    668171 A-T-AAATATTTAAAA----TGTTTATATTggccaggcatggtggctcacacctgtaatcccagcact
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_7456                                  15775 62 -     15935 A-T-AAATATTTAAAA----TGTTTATATTggccaggcatggtggctcacacctgtaatcccagcact
i Macaca_thibetana.k99_7456                              C 0 N 0
s Macaca_tonkeana.k141_1498238                               20572 62 -     45290 A-T-AAATATTTAAAA----TGTTTATATTggccaggcatggtggctcacacctgtaatcccagcact
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87594  1 +     94391 ---------------------A----------------------------------------------
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23932127 62 -  24302211 A-T-AAATATTTAAAA----TGTTTATGTTggccaggcatggtggctcacgcctgtaatcccagcact
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346305 62 +    752769 A-T-AAATATTTAAAA----TGTTTATATTggccgggcgcggtggctcacacctgtaatcccagcact
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15665 11 +    737560 G-T-AAGTAT-----A----GA----------------------------------------------
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              47054 11 -    317179 G-T-AAGTAT-----A----GA----------------------------------------------
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097493  9 -  40650429 a-t-aa----------atata-----------------------------------------------
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6847  1 -    207569 ---------------------A----------------------------------------------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6288  9 +     13704 ----AAGAAT-----A----AA----------------------------------------------
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3162 11 +     10310 A-T-AAGCAT-----T----AA----------------------------------------------
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18283374 12 -  93316391 G-T-AAGATT-----A----AGA---------------------------------------------
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    15437 11 -    145209 A-C-AAATAC-----A----GG----------------------------------------------
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13481 11 -     19307 A-T-CAGTAT-----T----AA----------------------------------------------
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849154 11 +   8254450 A-T-AAGTAT-----T----AA----------------------------------------------
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             33030 11 +     64694 A-T-AAGTAT-----T----AA----------------------------------------------
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3869 62 -     28506 A-T-AAATATTTAAAa----tgtttatgttagccaggcatggtggctcacacctgtaatcccagcact
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62487  9 -     63350 ----AAGAAT-----A----AA----------------------------------------------
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      4728 12 -     37649 G-T-AAGATT-----A----AGA---------------------------------------------
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26667 11 -    437263 A-T-AAGTAT-----T----AA----------------------------------------------
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137882 11 -    366855 A-C-AAATAT-----T----AA----------------------------------------------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                    393 11 +     82753 G-T-AAGTAT-----T----AA----------------------------------------------
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31388  9 +     37127 ----AAGTAT-----A----AA----------------------------------------------
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5181 11 +     14753 A-T-AAGTAT-----T----AA----------------------------------------------
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2401  5 +     14296 A-T-AA--------------A-----------------------------------------------
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               297719  9 -  14710649 ----AAGAAT-----A----AA----------------------------------------------
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                278351 11 -  10118263 A-T-AAGTAT-----T----AA----------------------------------------------
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585908 11 -   6019432 A-T-AAGTAT-----T----AA----------------------------------------------
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902117 10 -   4330536 A-T-A-GTAT-----T----AA----------------------------------------------
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32676 11 +     33610 A-T-AAGTAT-----T----AA----------------------------------------------
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186168 11 +    196477 A-T-AAGGAT-----T----AA----------------------------------------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025571  5 -   3037898 a-t-ga--------------a-----------------------------------------------
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                                9875 62 +     21681 A-T-AAATATTTAAAA----TGTTTATGTTggccaggcatggtggctcatgcctgtaatcccaggact
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865623 11 +   7148211 A-T-AAGTAT-----T----AA----------------------------------------------
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756451 11 +    783361 A-T-AAGTAT-----T----AA----------------------------------------------
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146028  9 -   9404916 ----AAGTAT-----A----AA----------------------------------------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102574546 12 - 196305487 A-T-AAGTAT-----A----TGT---------------------------------------------
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2232 12 +      8486 A-T-AAGTAT-----A----TGT---------------------------------------------
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744973 12 + 199412804 A-T-AAGTAT-----A----TGT---------------------------------------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355811 10 +   3988456 C-T-TAATAT-----A----A-----------------------------------------------
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              500776  9 -   2017862 ----AAGAAT-----A----AA----------------------------------------------
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         144714 11 +    630418 A-T-AAGTAT-----T----AA----------------------------------------------
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  2781538 11 -  10937097 A-T-AAGTAT-----T----AA----------------------------------------------
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               7120 11 -     18566 a-t-aaatAT-----A----AA----------------------------------------------
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458782  9 -    559221 ----AAGTAT-----A----AA----------------------------------------------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17585070 11 +  44047080 A-T-AAGTAT-----T----AA----------------------------------------------
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173491 11 -    191736 A-T-AAGTAT-----T----AA----------------------------------------------
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    38733 62 +     80009 a-t-aaatgttaaaaa----tgtttatgttggccaggcgtggtggctcacacctgtaatcctagcact
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189137628 62 + 189151597 a-t-aaatgttaaaaa----tgtttatgttggccaggcgtggtggctcacgcctgtaatcctagcact
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  147172  9 +    230217 ----AAGTAT-----T----AA----------------------------------------------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                259881  9 +  18783137 ----AAGTAT-----T----AA----------------------------------------------
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4717028  9 -   8748460 ----AAGTAT-----T----AA----------------------------------------------
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1264424 11 -   2937107 A-T-AAGTAT-----T----AA----------------------------------------------
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183437914 62 + 183742232 a-t-aaatatttaaaa----tgtttatgttggccaggcatggtggctcacgcctgtaatcccagcact
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1607 62 +     20448 A-T-AAATATTTAAAA----TGTTTATGTTggccaggcatggtggctcacgcctgtaatcccagcact
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20558412 62 +  20919399 A-T-AAATATTTAAAA----TGTTTATGTTggccaggcatggtggctcacgcctgtaatcccagcact
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                    350 62 +     41871 A-T-AAATATTTAAAA----TGTTTATGTTggccaggcatggtggctcacgcctgtaatcccagcact
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     3636 62 +     27711 A-T-AAATATTTAAAA----TGTTTATGTTggccaggcatggtggctcacgcctgtaatcccagcact
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  3721 62 +      9205 A-T-AAATATTTAAAA----TGTTTATGTTggccaggcatggtggctcacgcctgtaatcccagcact
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8907  9 -     78924 ----AAGTAT-----A----AA----------------------------------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            4728 12 +     13100 T-T-AAGTAT-----A----TGG---------------------------------------------
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             3096 12 +     25941 T-T-AAGTAT-----A----TGG---------------------------------------------
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25347  5 +     32600 A-C-AA--------------A-----------------------------------------------
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25912  5 -     29689 A-T-GA--------------A-----------------------------------------------
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 I 7
s Phocoena_phocoena.PhoPho_flattened_line_24159               8585 11 +     63832 A-T-AAGTAT-----T----AA----------------------------------------------
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38391 54 +     62158 A-T-AAATATTTAAAA----TGTTTATGTTggccaggcatggtggctcatgcctcc--------cact
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33118 54 +     89929 A-T-AAATATTTAAAA----TGTTTATGTTggccaggcatggtggctcatgcctcc--------cact
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34534 54 +     51399 A-T-AAATATTTAAAA----TGTTTATGTTggccaggcatggtggctcatgcctcc--------cact
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290755 54 -  14605196 a-t-aaatatttaaaa----tgtttatgttggccaggcatggtggctcatgcctcc--------cact
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              501 11 +     22620 A-T-AAGTAT-----T----AA----------------------------------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34291 11 +     35617 A-T-AAGTAT-----T----AA----------------------------------------------
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189125809 62 + 189387572 a-t-aaatattaaaaa----tgtttatgttggccaggcatgatggcttatgccagtaatcccagcact
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9565413 62 +   9816681 A-T-AAATATTAAAAA----TGTTTATGTTggccaggcatgatggcttatgccagtaatcccagcact
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68035 62 -     81375 A-T-AAATATTTAAAA----TGTTGATGTTggccaggcatggtggctcatgcctgtaatcccagcact
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9862 62 +     10147 A-T-AAATATTTAAAA----TGTTGATGTTggccaggcatggtggctcatgcctgtaatcccagcact
i Presbytis_mitrata.k141_2342859                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 10062 11 -     22811 A-T-AAATGT-----A----AA----------------------------------------------
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2592414  9 -   4620579 -----agaat-----a----aga---------------------------------------------
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986425 12 +   2598838 G-T-AAGATT-----A----AGA---------------------------------------------
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          24714 12 +     38485 G-T-AAGATT-----A----AGA---------------------------------------------
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                              875 12 +      4256 G-T-AAGATT-----A----AGA---------------------------------------------
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22233 12 +     35766 G-T-AAGATT-----A----AGA---------------------------------------------
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            416 12 -     24134 G-T-AAGATT-----A----AGA---------------------------------------------
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24228 12 -     67325 G-T-AAGATT-----A----AGA---------------------------------------------
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            473 12 -      6182 G-T-AAGATT-----A----AGA---------------------------------------------
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11273 11 -     21811 A-C-AAGTAT-----C----CA----------------------------------------------
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36730  9 +     42204 ----AAGAAT-----A----AA----------------------------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973755  1 +  28871421 ---------------------a----------------------------------------------
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1692  1 -      8028 ---------------------A----------------------------------------------
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20270339  9 -  38429054 ----AAGTAT-----T----AA----------------------------------------------
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                              9864 62 -     91421 A-T-AAATATTTAAAA----TGTTTATGTTggccaggcatggtggctcatgcctgtaatcccagcact
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7603998 62 +   7812017 A-T-AAATATTTAAAA----TGTTTATGTTggccaggcatggtggctcatgcctgtaatcccagcact
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9837 62 -     72585 A-T-AAATATTTAAAA----TGTTTATGTTggccaggcatggtggctcatgcctgtaatcccagcact
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4962 11 +     55207 A-T-AAGTAT-----T----AA----------------------------------------------
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinopithecus_bieti.k119_217274                             1550 62 -     11128 A-T-AAATATTTAAAA----TGTTTCTGTTggccaggcttggtggctcatgcctgtaatcccagcact
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230907 62 - 195417433 a-t-aaatatttaaaa----tgtttctgttggccaggcttggtggctcatgcctgtaatcccagcact
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7666555 62 +   7961872 A-T-AAATATTTAAAA----TGTTTCTGTTggccaggcttggtggctcatgcctgtaatcccagcact
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84741  1 -     96226 ---------------------A----------------------------------------------
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3612 11 +      4321 A-C-AAGTAT-----T----AA----------------------------------------------
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151427 10 -    313613 --C-TAAGTA-----T----AA----------------------------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 2 C 0
s Semnopithecus_entellus.k141_11662                          14379 62 -     19888 A-T-AAATATTTAAAA----TGTTTATGTTggccaggcatggtggctcatgcctgtaatcccagcact
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21584 62 +     39453 A-T-AAATATTTAAAA----TGTTTATGTTggccaggcatggtggctcatgcctgtaatcccagcact
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2108 62 +     27826 A-T-AAATATTTAAAA----TGTTTATGTTggccaggcatggtggctcatgcctgtaatcccagcact
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1630 62 -     19483 A-T-AAATATTTAAAA----TGTTTATGTTggccaggcatggtggctcatgcctgtaatcccagcact
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1692 62 +      7198 A-T-AAATATTTAAAA----TGTTTATGTTggccaggcatggtggctcatgcctgtaatcccagcact
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                          9952 62 +     15514 A-T-AAATATTTAAAA----TGTTTATGTTggccaggcatggtggctcatgcctgtaatcccagcact
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sorex_araneus.JH798187.1                                13647092 12 -  18376816 a-tgtgtgtg-----t----aa----------------------------------------------
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1948285  9 -   3870691 a-t-aa----------atata-----------------------------------------------
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27271  9 +     97271 ----AAGAAC-----A----CA----------------------------------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14257  9 -    196729 ----AAGTAT-----A----AA----------------------------------------------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   62882524 10 -  69701581 --t-ggatAT-----T----AA----------------------------------------------
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1088135 62 -   1523678 A-T-AAATATTAAAAa----tgtttatgttggccaggcatggtggcttacgccagtaatcccagcact
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6879 11 +     41958 A-T-AAGTAT-----T----AA----------------------------------------------
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69530 11 +    116680 A-T-AAGGAT-----T----AA----------------------------------------------
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115267 11 -    156842 A-T-AAGTAT-----T----AA----------------------------------------------
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383722 11 +    539355 A-T-AAATAT-----T----AA----------------------------------------------
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10714 12 +     70052 A-C-AGGGAT-----A----AAA---------------------------------------------
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               15019 12 +     25099 G-C-AGGGAT-----A----AAA---------------------------------------------
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186422958 62 + 186847797 a-t-aaatatttaaaa----tgtttatgttggccaggcatggtggctcacgcctgtaatcccagcact
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103254  4 +    114563 A-T-GA--------------------------------------------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   1918 11 +      8208 A-C-ACAAAT-----A----AG----------------------------------------------
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     79025 11 +    610378 A-T-AAGTAT-----T----AA----------------------------------------------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          5686 62 -     20410 A-T-AAATATTTAAAA----TGTTTATGTTggccaggcatggtggctcatgcctgtaatcccagcact
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9881 62 +     15221 A-T-AAATATTTAAAA----TGTTTATGTTggccaggcatggtggctcatgcctgtaatcccagcact
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5786 62 +     19930 A-T-AAATATTTAAAA----TGTTTATGTTggccaggcatggtggctcatgcctgtaatcccagcact
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2216 62 -     19997 A-T-AAATATTTAAAA----TGTTTATGTTggccaggcatggtggctcatgcctgtaatcccagcact
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42335 62 -     60166 A-T-AAATATTTAAAA----TGTTTATGTTggccaggcatggtggctcatgcctgtaatcccagcact
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9807 62 -     27529 A-T-AAATATTTAAAA----TGTTTATGTTggccaggcatggtggctcatgcctgtaatcccagcact
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9747 62 -     18194 A-T-AAATATTTAAAA----TGTTTATGTTggccaggcatggtggctcatgcctgtaatcccagcact
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3483 62 -     21137 A-T-AAATATTTAAAA----TGTTTATGTTggccaggcatggtggctcatgcctgtaatcccagcact
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2185 62 -     10723 A-T-AAATATTTAAAA----TGTTTATGTTggccaggcatggtggctcatgcctgtaatcccagcact
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1338 62 +      9834 A-T-AAATATTTAAAA----TGTTTATGTTggccaggcatggtggctcatgcctgtaatcccagcact
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19656 62 +     32220 A-T-AAATATTTAAAA----TGTTTATGTTggccaggcatggtggctcatgcctgtaatcccagcact
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933753 62 +   6242583 A-T-AAATATTTAAAA----TGTTTATGTTggccaggcatggtggctcatgcctgtaatcccagcact
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        2998 62 +     20839 A-T-AAATATTTAAAA----TGTTTATGTTggccaggcatggtggctcatgcctgtaatcccagcact
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    730 11 -      1748 A-C-AACTAT-----T----AA----------------------------------------------
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 C 0
s Tupaia_chinensis.KB320699.1                              2149677 11 +   4065304 a-t-gaatat-----a----aa----------------------------------------------
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     3268 11 -     10553 A-T-GAATAT-----A----AA----------------------------------------------
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737785 11 +  33153633 A-T-AAGTAT-----T----AA----------------------------------------------
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   51586 12 -     77625 ACA-AAAATA-----T----AA----------------------------------------------
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4846973  9 -   5085361 ----AAGAAT-----A----AA----------------------------------------------
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   7107  9 +     50397 -----AGAAT-----A----AGA---------------------------------------------
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              7155  9 +     24756 -----agaat-----a----aga---------------------------------------------
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368453 11 -   5488506 A-C-AAGTAT-----T----AA----------------------------------------------
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7443  9 -     43706 ----AAGTAT-----A----AA----------------------------------------------
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19781  9 -     24430 A-T-AA----------ATATA-----------------------------------------------
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1898  9 +      2932 ----AAGAAT-----A----AA----------------------------------------------
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      10057  5 +     63895 A-T-AA--------------A-----------------------------------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11477 11 +     12536 a-t-aagcat-----t----aa----------------------------------------------
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Solenodon_paradoxus.SolPar_flattened_line_5840            187731  1 -    191337 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Rhinolophus_sinicus.LVEH01000134.1                        366972  1 -   3329780 I
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Hipposideros_galeritus.HipGal_scaffold_29171               39868  1 +     43066 I
e Hipposideros_armiger.JXIK01000431.1                       108427  1 +   1711038 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galagoides_demidoff.k141_31856                              3217  0 -      3432 C
e Erinaceus_europaeus.JH835339.1                           3325391  0 -   7059049 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Allactaga_bullata.AllBul_scaffold_9566                     65041  0 -     89534 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1445 241 +     62944 tttggaggcccaggcgggcagatcacaaggtcaagagatcgagaccagcccggtcaacatggtgaaaccctgtctctactaaaaataaaaaaattagcttggcatggtggtgtgtgcctgtaatcccagctactcaggaggctgaggcagcagaatctcttgaacctagga---gggggaggttgcac-tgagccaaaattgtgccgct--gcactccagcctgggcgacag-------------agc-a--agactccatct
s Allenopithecus_nigroviridis.k141_3361533                    9438 244 -     52922 ttgggagacccagtcaggcggatcatgaggtcaagagattgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgcgtgcctgtagtgccagctacttgggaggctgaggcaggagaatcgcttgaaccctggaggtggtggaggtttcaa-tgagcctaaattgcaccact--gcactccagcctgggcgatgg-------------aga-g--agactccatct
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9365 244 -     28001 ttgggagacccagtcaggcggatcatgaggtcaagagattgagatcagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcatggtggtgcgcgcctgtagtgccagctactcgggaggctgaggcaggagaatcgcttgaaccctggaggtggtggaggtttcaa-tgagctgaaattgcaccact--gcactccagcctgggcgatgg-------------aga-g--agactccatca
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9491 244 -      9772 ttgggagacccagtcaggcggatcatgaggtcaagagattgagatcagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgcgcgcctgtagtgccagctacttgggaggctgaggcaggagaatcgcttgaaccctggaggtggtggaggtttcaa-tgagctgaaattgcaccact--gcactccagcctgggcgatgg-------------aga-g--agactccatca
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            648 244 -     12518 ttgggagacccagtcaggcggatcatgaggtcaagagattgagatcagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgcgcgcctgtagtgccagctacttgggaggctgaggcaggagaatcgcttgaaccctggaggtggtggaggtttcaa-tgagctgaaattgcaccact--gcactccagcctgggcgatgg-------------aga-g--agactccatca
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470402 241 +   4669795 ttgggaggcccagtcaggcggatcatgaggtcaagagattgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagccgggcgtggtggtgcgcgcctgtagtgccagctactcgggaggctgaggcaggagaatcgcttgaacccaggag---gtggaggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcaatgg-------------aga-g--agactccatct
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         8951 241 -     19203 ttgggaggcccagtcaggcggatcatgaggtcaagagattgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagccgggcgtggtggtgcgcgcctgtagtgccagctactcgggaggctgaggcaggagaatcgcttgaacccaggag---gtggaggtttcaa-tgagctgaaattgcaccact--gcactccagcctgggcaatgg-------------aga-g--agactccatct
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3370 241 +      8260 ttgggaggcccagtcaggcggatcatgaggtcaagagattgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagccgggcgtggtggtgcgcgcctgtagtgccagctactcgggaggctgaggcaggagaatcgcttgaacccaggag---gtggaggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcaatgg-------------aga-g--agactccatct
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3600 241 +     27781 ttgggaggcccagtcaggcggatcatgaggtcaagagattgagaccagcctggccaacatggtgaaaccccgtctctattaaaaatacaaaaattagctgggcgtggtggtgcgcgcctgtagtgccagctactcgggaggctgaggcaggagaatcgcttgaacccaggag---gtggaggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcaatgg-------------aga-g--agactccatct
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         3753 244 -     20310 ttgggaggcccagtcaggcggatcatgaggtcaagagattgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgcgcgcctgtagtgccagctactcgggaggctgaggcaggagaatcgcttgaaccctggaggtggtggaggtttcaa-tgagccgaaattgcaccact--gccctccagcctgggcgatgg-------------aga-g--agactccatct
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6737 244 +     29689 ttgggagacccagtcaggcggatcatgaggtcaagagattgagatcagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgcgcgcctgtagtgccagctactcgggaggctgaggcaggagaatcgcttgaaccctggaggtggtggaggtttcaa-tgagccgaaattgcaccact--gccctccagcctgggcgatgg-------------aga-g--agactccatct
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            1090 244 +      9989 ttgggaggcccagtcaggcggatcacgaggtcaagagattgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgcgcgcctgtagtgccagctactcgggaggctgaggcaggagaatcacttgaaccctggaggtggtggaggtttcaa-tgagccaaaattgcaccact--gccctccagcctgggcgatgg-------------aga-g--agactccagct
i Cercopithecus_diana.k141_2427854                       C 0 I 75
s Cercopithecus_hamlyni.k141_187466                           9425 244 -     27936 ttgggaggcccagtcaggcggatcatgaggtcaagagattgagaccagcctggccaacatggcgaaaccccgtctctactaaaaatacaaaaattagctgggcgcggtggtgcgtgcctgtagtgccagctactcgggaggctgaggcaggagaatcgcttgaaccctggaggtggtggaggtttcaa-tgagccgaaattgcaccact--gcactccagtctgggcgatgg-------------aga-g--agactccatct
i Cercopithecus_hamlyni.k141_187466                      C 0 I 1
s Cercopithecus_lowei.k141_457449                             9444 244 -     11289 ttgggaggcccagtcaggcggatcatgaggtcaagagattgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgcgcgcctgtagtgccagctactcgggaggctgaggcaggagaatcgcttgaaccctggaggtggtggaggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcgatgg-------------aga-g--agactccatct
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38811820 244 +  39242232 ttgggagacccagtcaggcggatcatgaggtcaagagattgagatcagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgcgcacctgtagtgccagctactcgggaggctgaggcaggagaatcgcttgaaccctggaggtggtggaggtttcaa-tgagccgaaattgcaccact--gccctccagcctgggcgatgg-------------aga-g--agactccatct
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217511 244 -  21565898 ttgggaggcccagtcaggcggatcatgaggtcaagagattgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgcgcgcctgtagtgccagctactcgggaggctgaggcaggagaatcgcttgaaccctggaggtggtggaggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcgatgg-------------aga-g--agactccatct
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34631 244 -     53127 ttgggaggcccagtcaggcggatcatgaggtcaagagattgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgcgcgcctgtagtgccagctactcgggaggctgaggcaggagaatcgcttgaaccctggaggtggtggaggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcgatgg-------------aga-g--agactccatct
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        1923 244 +      7159 ttgggagacccagtcaggtggatcatgaggtcaagagattgagatcagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgcgcacctgtagtgccagctactcgggaggctgaggcaggagaatcgcttgaaccctggaggtggtggaggtttcaa-tgagccgaaattgcaccact--gccctccagcctgggcgatgg-------------aga-g--agactccacct
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9436 244 -     27947 ttgggaggcccagtcaggcggatcatgaggtcaagagattgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgcgtgcctgtagtgccagctactcgggaggctgaggcaggagaatcgcttgaaccctggaggtggtggaggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcgttgg-------------agt-t--agactccatat
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9412 244 +     17596 ttgggaggcccagtcaggcggatcatgaggtcaagagattgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcatggtggtgcgcgcctgtagtgccagctactcgggaggctgaggcaggagaatcgcttgaaccctggaggtggtggaggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcgatgg-------------aga-g--agactccatct
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         39906 244 -     41420 ttgggaggcccagtcaggcggatcatgaggtcaagagattgagaccagcctggtcaacacggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgcgcgcctgtagtgccagctacttgggaggctgaggcaggagaatcgcttgaaccctggaggtggtggaggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcgatgg-------------aga-g--agactccatct
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chlorocebus_aethiops.ctg25                              18423375 244 -  18827391 ttgggagacccagtcaggcggatcatgaggtcaagagattgagatgatcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgcgcgcctgtagtgccagctactcgggaggctgaggcaggagaatcgcttgaaccctggaggtggtggaggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcgatgg-------------aga-g--agactccatct
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                        9818 244 -     50209 ttgggagacccagtcaggcggatcatgaggtcaagagattgagatgatcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgcgcgcctgtagtgccagctactcgggaggctgaggcaggagaatcgcttgaaccctggaggtggtggaggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcgatgg-------------aga-g--agactccatct
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135416823 243 + 135778131 ttgggagacccagtcaggcggatcatgaggtcaagagattgagatgatcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggcg-gcgcctgtagtgccagctactcgggaggctgaggcaggagaatcgcttgaaccctggaggtggtggaggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcgatgg-------------aga-g--agactccatct
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1905345 241 +   2368649 ttgggaggcccaggcaggtggatcatgaggtcaagagattgagaccagtctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgcgcacctgtagtgccagctactcgggaggctgaggcaggagaatcgcttgaacccagga---ggtggaggtttcaa-tgagccgaagttgcaccgct--gcactccagcctgggtgatgg-------------aga-a--agactccacct
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199945015 237 + 200372422 ttgggaggcccaggcaggtggatcatgaggtcaagagactgagaccagtctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgcgcacctgtagtgccagctactcgggaggctgaggcaggagaatcgcttgaacccagga---ggtggaggtttcaa-tgagccgaagttgcactgct--gcactccagcctgggcgatgg-------------aga-a--agactcc----
i Colobus_guereza.LG01                                   C 0 I 4
s Colobus_polykomos.k141_906115                              31884 239 +     84244 ttgggaggcccaggcaggtggatcatgaggtcaagagattgagaccagtctggccaacacggtgaaaccccgtctctactaaaaatacaaaacttagctgggcgtggtggtgcgcacctgtagtgccagctactcgggaggctgaggcaggagaatcgcttgaacccagga---ggtggaggtttcaa-tgagccgatgttgcaccggg--gcacccccgcgtggggtttgg-------------ata-accaaacacc----
i Colobus_polykomos.k141_906115                          C 0 I 4
s Erythrocebus_patas.Contig38                             21200054 225 -  21539334 ttgggagacccagtcaggcggatcatgaggtcaagagattgagatgatcctggccaacatggtgaaaccc-gtctctactaaaaatacaaaaattagctgggcgtggtggtgcgcgcctgtagtgccagctactcgggaggctgaggcaggagaatcgcttgaaccctggaggtggtggaggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcga----------------------------------
i Erythrocebus_patas.Contig38                            C 0 C 0
s Gorilla_beringei.k141_3596273                              10677 241 -     32273 tttggaggcccaggcgggcagatcacaaggtcaagagatcgagaccagcccggtcaacatggtgaaaccctgtctctactaaaaattaaaaaattagctgggcatggtggtgtgtgcctgtaatcccagctactcaggaggctgaggcagcagaatctcttgaacccagga---gggggaggttgcac-tgagccgaaattgtgccgct--gcactccagcctgggtgacag-------------agc-a--agactccatct
i Gorilla_beringei.k141_3596273                          I 62 I 8
s Gorilla_gorilla.LT578341.1                             186332827 241 + 186649187 tttggaggcccaggcgggcagatcacaaggtcaagagatcgagaccagcccggtcaacatggtgaaaccctgtctctactaaaaattaaaaaattagctgggcatggtggtgtgtgcctgtaatcccagctactcaggaggctgaggcagcagaatctcttgaacccagga---gggggaggttgcac-tgagccgaaattgtgccgct--gcactccagcctgggtgacag-------------agc-a--agactccatct
i Gorilla_gorilla.LT578341.1                             C 0 I 3
s Hoolock_leuconedys.ctg274                                    429568 240 +    630532 tttggaggcc-aggtgggcagatcatgtggtcaagagattgataccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcatggtggtgcactcctgtaatcccagctactcaggaggctgaagcagaagaattgtttgaacccggga---ggcggacgttgcac-tgagtcaaaattgtgccact--gcactccagcctgggcaagag-------------agc-g--agactccgtct
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_307679                               12499 241 -     15490 ttcagaggcccaggcgggcagatcatgtggtcaagagatcgataccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattaactgggcatggtggtgcactcctgtaatcccagctactcaagaggctgaagcaggagaattgtttgaacccggga---ggcggaggttgcac-tgagtcaaaattgtgccact--gcactccagcctgggtgagag-------------agc-g--agactccatct
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              54504 241 +     67168 ttcagaggcccaggcgggcagatcatgtggtcaagagatcgataccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattaactgggcatggtggtgcactcctgtaatcccagctactcaggaggctgaagcaggagaattgtttgaacccggga---ggcggaggttgcac-tgagtcaaaattgtgccact--gcactccagcctgggtgagag-------------agc-g--agactccatct
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189538156 241 - 191637585 ttcaggggcccaggcgggcagatcatgtggtcaagagatcgataccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattaactgggcatggtggtgcactcctgtaatcccagctactcaggaggctgaagcaggagaattgtttgaacccggga---ggcggaggttgcac-tgagtcaaaattgtgccact--gcactccagcctgggtgagag-------------agc-g--agactccatct
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3331049 241 -  11177569 ttcaggggcccaggcaggcagatcatgtggtcaagagatcgataccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattaactgggcatggtggtgcactcctgtaatcccagctactcaggaggctgaagcaggagaattgtttgaacccggga---ggcggaggttgcac-tgagtcaaaattgtgccact--gcactccagcctgggtgagag-------------agc-g--agactccatct
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1431945 245 +   1826925 ttgggaggcccagtcaggcagatcatgaggtcaagagattgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagccgggtgtggtggtgcacacctgtagtgccagctactcgggaggctgaggcaggagaatcgcttgaaccctggaggaggtggaggtttcaaatgagccgaaattgcaccact--gcactgcagcctgggcgatgg-------------aga-g--agactccgtct
i Lophocebus_aterrimus.ctg367                            C 0 I 3
s Macaca_arctoides.k141_2326796                               1757 244 +     40492 ttgggaggcccagtcaggcggatcatgaggtcaagagattgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggtgtggtggtgcgcgcctgtagtgccagctactcaggaggctgaggcaggagaattgcttgaaccctggaggtggtgggggtttcaa-tgagccgaaattgcaccact--gcactcccgccggggcgatgg-------------aga-g--agactacatct
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59671017 244 +  60120075 ttgggaggcccagtcaggtggatcatgaggtcaagagattgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggtgtggtggtgcgcgcctgtagtgccagctactcaggaggctgaggcaggagaattgcttgaaccctggaggtggtgggggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcgatgg-------------aga-g--agactccatct
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7515 244 -     26193 ttgggaggcccagtcaggcggatcatgaggtcaagagattgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggtgtggtggtgcgcgcctgtagtgccagctactcaggaggctgaggcaggagaattgcttgaacgctggaggtggtgggggtttcaa-tgagtcgaaattgcaccact--gcactccagcctgggcgatgg-------------aga-g--agactccatct
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75309 244 -    114318 tcgggaggcccagtcaggcggatcatgaggtcaagagattgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggtgtggtggtgcgcgcctgtagtgccagctattcaggaggctgaggcaggagaattgcttgaaccctggaggtggtgggggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcgatgg-------------aga-g--agactccatct
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  1028 244 -     23192 ttgggaggcccagtcaggcggatcatgaggtcaagagattgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggtgtggtggtgcgcgcctgtagtgccagctactcaggaggctgaggcaggagaattgcttgaaccctggaggtggtgggggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcgatgg-------------aga-g--agactccatct
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10481 244 -     29190 ttgggaggcccagtcaggcggatcatgaggtcaagagattgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggtgtggtggtgcgcgcctgtagtgccagctactcaggaggctgaggcaggagaattgcttgaaccctggaggtggtgggggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcgatgg-------------aga-g--agactccatct
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  19048 244 +     37952 ttgggaggcccagtcaggcggatcatgaggtcaagagattgagaccagcctggccaacatggtgaaaacccgtctctactaaaaatacaaaaattagctgggtgtggtggtgcgcgcctgtagtgccagctactcaggaggctgaggcaggagaattgcttgaaccctggaggtggtgggggtttcaa-tgagccgaaattgcaccact--gcactccagtctgggcgatgg-------------aga-g--atactccatct
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834135 244 + 187317192 ttgggaggcccagtcaggcggatcatgaggtcaagagattgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggtgtggtggtgcgcgcctgtagtgccagctactcaggaggctgaggcagaagaattgcttgaacgctggaggtggtgggggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcgatgg-------------aga-g--agactccatct
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452697 244 -  25927173 ttgggaggcccagtcaggcggatcatgaggtcaagagattgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggtgtggtggtgcgcgcctgtagtgccagctactcaggaggctgaggcaggagaattgcttgaaccctggaggtggtgGGGGTTTCaa-tgagccgaaattgcaccact--gcactccagcctgggcgatgg-------------aga-g--agactccatct
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  74897 244 +     89720 ttgggaggcccagtcaggcggatcatgaggtcaagagattgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggtgtggtggtgcgcgcctgtagtgccagctactcaggaggctgaggcaggagaattgcttgaaccctggaggtggtgggggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcgatgg-------------aga-g--agactccatct
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 1894 244 +     20474 ttgggaggcccagtcaggcggatcatgaggtcaagagattgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggtgtggtggtgcgcgcctgtagtgccagctactcaggaggctgaggcaggagaattgcttgaaccctggaggtggtgggggtttcaa-tgagccgaaattgcacccct--gcactccagcctgggcgatgg-------------aga-g--agactccatct
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1695 244 -     14993 ttgggaggcccagtcaggcggatcatgaggtcaagagattgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggtgtggtggtgcgcgcctgtagtgccagctactcaggaggctgaggcaggagaattgcttgaaccctggaggtggtgggggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcgatgg-------------aga-g--agactccatct
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324568 244 -    668171 ttgggaggcccagtcaggcggatcatgaggtcaagagattgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggtgtggtggtgcgcgcctgtagtgccagctactcaggaggctgaggcaggagaattgcttgaaccctggaggtggtgggggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcgatgg-------------aga-g--agactccatct
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                    1 244 -     24072 ttgggaggcccagtcaggtggatcatgaggtcaagagattgagaccagcctggccaacatggtgaaaccccgtctgtactaaaaatacaaaaattagctgggtgtggtggtgcgcgcctgtagtgccagctactcaggaggctgaggcaggagaattgcttgaaccctggaggtggtgggggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcgatgg-------------aga-g--agactccatct
i Macaca_thibetana.k99_256239                            N 0 C 0
s Macaca_tonkeana.k141_1498238                               20634 244 -     45290 ttgggaggcccagtcaggcggatcatgaggtcaagagattgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggtgtggtggtgcacgcctgtagtgccagctactcaggaggctgaggcaggagaattgcttgaaccctggaggtggtgggggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcgatgg-------------aga-g--agactccatct
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23932189 241 -  24302211 ttgggaggcccagtcaggcggatcatgaggtcaagagattgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagccgggcgtggtggtgcgcgcctgtagtgccagctactcgggaggctgaggcaggagaatcgcttgaacccaggag---gtggaggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggtgatgg-------------aga-g--agactccatct
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346367 241 +    752769 ttgggaggcccagtcaggcggatcatgaggtcaagagattgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagccgggcgtggtggtgcgcgcctgtagtgccagctactcgggaggctgaggcaggagaatcgcttgaacccaggag---gtggaggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcgatgg-------------aga-g--agactccatct
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Miopithecus_ogouensis.k141_534055                           3931 244 -     28506 ttgggaggcccagtcaggcggatcatgaggtcaagagattgagatcagcctggccagcatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgcacgcctgtagtgccagctactcgggaggctgaggcaggagaatcgcttgaaccctggaggtggtggaggtttcag-tgagccgaaattgcaccact--gcactccagcctgggcaatgg-------------aga-g--agactccatct
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Nasalis_larvatus.k141_413338                                9937 241 +     21681 ttgggaggcccaggcaggcggatcgtgaggtcaagagattgagatcagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgcacacctgtagtgccagctactcaggaggctgaggcaggagaattgctggaaccctgga---ggtaaaggtttcaa-tgagctgaaattgcaccact--gcactccagcctgggcaatgg-------------aga-g--agactccatct
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Pan_paniscus.KQ411613.1                                    38795 241 +     80009 tttggaggcccaggcgggcagatcacaaggtcaagagatcgagaccagcctggtcaatatggtgaaaccctgtctctactaaaaataaaaaaattagctgggcatggtggtgtgtgcctgtaatcccagctactcaggaggctgaggcagcagaatctcttgaacccagga---gggggaggttgcac-tgagccaaaattgtgctgct--gcactccagcctgggcgacag-------------agc-a--agactccatct
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189137690 170 + 189151597 tttggaggcccaggcgggcagatcacaaggtcaagagatcgagaccagcccggtcaacatggtgaaatcctgtctctactaaaaataaaaaaattagctgggcatggtggtgtgtgcctataatcccagctactcaggaggctgaggcagcagaatctcttgaacccagg---------------------------------------------------------------------------------------------
i Pan_troglodytes.CM009242.2                             C 0 I 71
s Papio_anubis.CM001495.2                                183437976 244 + 183742232 ttgggaggcccagtcaggcggatcatgaggtcaagagattgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagccgggcgtggtggtgcgcacctgtagtgccagctactcgggaggctgaggcaggagaatcgcttgaaccctggaggaggtggaggtttcaa-tgagccgaaattgcaccact--gcactgcagcctgggcgatgg-------------aga-g--agactccgtct
i Papio_anubis.CM001495.2                                C 0 I 3
s Papio_cynocephalus.k141_4307930                             1669 244 +     20448 ttgggatgcccagtcaggcggatcatgaggtcaagagattgagaccagcttggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagccgggtgtggtggtgcgcacctgtagtgccagctactcgggaggctgaggcaggagaatcgcttgaaccctggaggaggtggaggtttcaa-tgagccaaaattgcaccact--gcactgcagcctgggcgatgg-------------aga-g--agactccgtct
i Papio_cynocephalus.k141_4307930                        C 0 I 3
s Papio_hamadryas.Contig39                                20558474 244 +  20919399 ttgggaggcccagtcaggcggatcatgaggtcaagagattgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagccgggcgtggtggtgcgcacctgtagtgccagctactcgggaggctgaggcaggagaatcgcttgaaccctggaggaggtggaggtttcaa-tgagccgaaattgcaccact--gcactgcagcctgggcgatgg-------------aga-g--agactccgtct
i Papio_hamadryas.Contig39                               C 0 I 3
s Papio_kindae.k141_1936966                                    412 244 +     41871 ttgggatgcccagtcaggcggatcatgaggtcaagagattgagaccagcttggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagccgggtgtggtggtgcgcacctgtagtgccagctactcgggaggctgaggcaggagaatcgcttgaaccctggaggaggtggaggtttcaa-tgagccaaaattgcaccact--gcactgcagcctaggcgatgg-------------aga-g--agactccgtct
i Papio_kindae.k141_1936966                              C 0 I 3
s Papio_papio.k141_802527                                     3698 244 +     27711 ttgggaggcccagtcaggcggatcatgaggtcaagagattgagaccagcctggccaacatggtgaaaccccgtctctattaaaaatacaaaaattagccgggcgtggtggtgcgcacctgtagtgccagctactcgggaggctgaggcaggagaatcgcttgaaccctggaggaggtggaggtttcaa-tgagccgaaattgcaccact--gcactgcagcctgggcgatgg-------------aga-g--agactccgtct
i Papio_papio.k141_802527                                C 0 I 3
s Papio_ursinus.k141_3428135                                  3783 244 +      9205 ttgggaggcccagtcaggcggatcatgaggtcaagagattgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagccgggcgtggtggtgcgcacctgtagtgccagctactcgggaggctgaggcaggagaatcgcttgaaccctggaggaggtggaggtttcaa-tgagccgaaattgcaccact--gcactgcagcctgggcgatgg-------------aga-g--agactccgtct
i Papio_ursinus.k141_3428135                             C 0 I 3
s Piliocolobus_badius.k141_1234363                           38445 241 +     62158 ttgggaggcccaggcaggcggatcatgaggtcaagagattgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattacctgggcgtggtggtgcgcacctgtagtgccagctactcgggaggctgaggcaggagaatcgcttgaacctggga---ggtggaggtttcaa-tgagccgaagttgcaccact--gcactccagcctgggcgatgg-------------aga-a--agactccacct
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33172 241 +     89929 ttgggaggcccaggcaggcggatcatgaggtcaagagattgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattacctgggcgtggtggtgcgcacctgtagtgccagctactcgggaggctgaggcaggagaatcgcttgaacctggga---ggtggaggtttcaa-tgagccgaagttgcaccact--gcactccagcctgggcgatgg-------------aga-a--agactccacct
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34588 241 +     51399 ttgggaggcccaggcaggcggatcatgaggtcaagagattgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattacctgggcgtggtggtgcgcacctgtagtgccagctactcgggaggctgaggcaggagaatcgcttgaacctggga---ggtggaggtttcaa-tgagccgaagttgcaccact--gcactccagcctgggcgatgg-------------aga-a--agactccacct
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14290809 241 -  14605196 ttgggaggcccaggcaggcggatcatgaggtcaagagattgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattacctgggcgtggtggtgcgcacctgtagtgccagctactcgggaggctgaggcaggagaatcgcttgaacctggga---ggtggaggtttcaa-tgagccgaagttgcaccact--gcactccagcctgggcgatgg-------------aga-a--agactccacct
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189125871 241 + 189387572 ttcggaggcccagGCGGAcacatcatgaggtcaagagattgagaccagcctggccaacatggtgaaaccccgtctctaataaaaatacaaaaattagccgggcatggtggtgcactcctgtaatcccagctactcaggaggctgaggcaggagaattgtttgaacctggga---ggcggaggttgcac-tgagccaaaattgtgccact--gcactccagcctgggcaaaag-------------agc-g--agactccgtct
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9565475 241 +   9816681 ttcggaggcccaggcggacacatcatgaggtcaagagattgagaccagcctggccaacatggtgaaaccccgtctctaataaaaatgcaaaaattagccgggcatggtggtgcactcctgtaatcccagctactcaggaggctgaggcaggagaattgtttgaacctggga---ggcggaggttgcac-tgagccaaaattgtgccact--gcactccagcctgggcaaaag-------------agc-g--agactccgtct
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68097 241 -     81375 ttgggaggcccaggcaggcggatcgtgaggtcaagagattgagatcagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgcacacctgtagtgccagctactcaggaggctgaggcaggagaactgcttgaaccctgga---ggtggaggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcaatgg-------------aga-g--agactccatct
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_2342859                              9924 222 +     10147 ttgggaggcccaggcaggcggatcgtgaggtcaagagattgagatcagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgcacacctgtagtgccagctactcaggaggctgaggcaggagaactgcttgaaccctgga---ggtggaggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggca-----------------------------------
i Presbytis_mitrata.k141_2342859                         C 0 N 0
s Pygathrix_cinerea.k141_1153803                              9926 241 -     91421 ttgggaggcccaggcaggtggatcatgaggtcaagagattgagatcagcctggccaagatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcatggtggtgcacacctgtagtgccagctactcaggaggctgaggcaggagaattgcttgaaccctgga---ggtggaggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcaatgg-------------aga-g--agactccatct
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7604060 240 +   7812017 ttgggagg-ccaggcaggtggatcatgaggtcaagagattgagatcagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagctgggcgtggtggtgcacacctgtagtgccagctactcaggaggctgaggcaggagaattgcttgaaccctgga---ggtgggggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcaatgg-------------aga-g--agactccatct
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9899 241 -     72585 ttgggaggcccaggcaggtggatcatgaggtcaagagattgagatcagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagctgggcgtggtggtgcacacctgtagtgccagctactcaggaggctgaggcaggagaattgcttgaaccctgga---ggtgggggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcaatgg-------------aga-g--agattccatct
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             1612 241 -     11128 ttgggaggcccaggcaggcggatcgtgaggtcaagagattgagatcagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgcacacctgtagtgccagctactcaggaggctgaggcaggagaattgcttgaaccctaga---ggtggaggtttcaa-tgagctgaaattgcaccact--gcactccagcctgggcaatgg-------------aga-g--atactccatct
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91230969 241 - 195417433 ttgggaggcccaggcaggcggatcgtgaggtcaagagattgagatcagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgcacacctgtagtgccagctactcaggaggctgaggcaggagaattgcttgaaccctaga---ggtggaggtttcaa-tgagctgaaattgcaccact--gcactccagcctgggcaatgg-------------aga-g--atactccatct
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7666617 241 +   7961872 ttgggaggcccaggcaggcggatcgtgaggtcaagagattgagatcagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgcacacctgtagtgccagctactcaggaggctgaggcaggagaattgcttgaaccctaga---ggtggaggtttcaa-tgagctgaaattgcaccact--gcactccagcctgggcaatgg-------------aga-g--atactccatct
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Semnopithecus_entellus.k141_11662                          14441 241 -     19888 ttgggaggcccaggcaggcggctcgtgaggtcaagagattgagatcagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgcacacctgtagtgccagctactcaggagactaaggcaggagaattgcttgaaccctgga---ggtggaggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcaatgg-------------aga-g--agactccatct
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21646 241 +     39453 ttgggaggcccaggcaggcggttcgtgaggtcaagagattgagatcagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgcacacctgtagtgccagctactcaggagactaaggcaggagaattgcttgaaccctgga---ggtggaggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcaatgg-------------aga-g--agactccatct
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2170 241 +     27826 ttgggaggcccaggcaggcggctcgtgaggtcaagagattgagatcagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgcacacctgtagtgccagctactcgggagactaaggcaggagaattgcttgaaccctgga---ggtggaggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcaatgg-------------aga-g--agactccatct
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1692 241 -     19483 ttgggaggcccaggcaggcggctcgtgaggtcaagagattgagatcagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgcacacctgtagtgccagctactcaggagactaaggcaggagaattgcttgaaccctgga---ggtggaggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcaatgg-------------aga-g--agactccatct
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1754 241 +      7198 ttgggaggcccaggcaggcggctcgtgaggtcaagtgattgagatcagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgcacacctgtagtgccagctactcaggagactaaggcaggagaattgcttgaaccctgga---ggtggaggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcaatgg-------------aga-g--agactccatct
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         10014 242 +     15514 ttgggaggcccaggcaggcggctcgtgaggtcaagagactgagatcagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgcacacctgtagtgccagctactcaggagactaaggcaggagaattgcttgaaccctgga---ggtggaggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcaatgg-------------agaag--agactccatct
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1088197 241 -   1523678 ttcagaggcccaggcgggcagatcatgtggtcaagagattgataccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattaactgggcatggtggtgcactcctgtaatctcagctactcaggaggctgaagcaggagaattgtttgaacccggga---ggcggaggttgcac-tgagtcaaaattgtgccact--gcactccagcctggatgagag-------------agc-a--agactccatct
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Theropithecus_gelada.CM009954.1                        186423020 244 + 186847797 ttgggaggcccagtcaggcggatcatgaggtcaagagattgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagccgggcgtggtggtgcgcacctgtagtgccagctactcgggaggctgaggcaggagaatcgcttgaaccctggaggaggtggaggtttcaa-tgagccgaaattgcaccact--gcactgcagcctgggcgatgg-------------aga-g--agactccgtct
i Theropithecus_gelada.CM009954.1                        C 0 I 3
s Trachypithecus_auratus.k141_722599                          5748 241 -     20410 ttgggaggcccaggcaggtggctcgtgaggtcaagagattgagatcagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgcacacctgtagtgccagctactcaggagactaaggcaggagaattgcttgaaccctgga---ggtggaggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcaatgg-------------aga-g--agactccatct
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                     9943 241 +     15221 ttgggaggcccaggcaggcggctcgtgaggtcaagagattgagatcagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgcacacctgtagtgccagctactcaggagactaaggcaggagaattgcttgaaccctgga---ggtggaggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcaatgg-------------aga-g--agactccatct
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        5848 241 +     19930 ttgggaggcccaggcaggcggctcgtgaggtcaagagattgagatcagcctggcccacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgcacacctgtagtgccagctactcaggagactaaggcaggagaattgcttgaaccctgga---ggtggaggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcaatgg-------------aga-g--agactccatct
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2278 241 -     19997 ttgggaggcccaggcaggcggctcgtgaggtcaagagattgagatcagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgcacacctgtagtgccagctactcaggagactaaggcaggagaattgcttgaaccctgga---ggtggaggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcaatgg-------------aga-g--agactccatct
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42397 241 -     60166 ttgggaggcccaggcaggcggctcgtgaggtcaagagattgagatcagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgcacacctgtagtgccagctactcaggagactaaggcaggagaattgcttgaaccctgga---ggtggaggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcaatgg-------------ata-g--agactccatct
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                         9869 241 -     27529 ttgggaggcccaggcaggcggctcgtgaggtcaagagattgagatcagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgcacatctgtagtgccagctactcaggagactaaggcaggagaattgcttgaaccctgga---ggtggaggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcaatgg-------------aga-g--agactccatct
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                      9809 241 -     18194 ttgggaggcccaggcaggcggctcgtgaggtcaagagattgagatcagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgcacacctgtagtgccagctactcaggagactaaggcaggagaattgcttgaaccctgga---ggtggaggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcaatgg-------------aga-g--agactccatct
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3545 241 -     21137 ttgggaggcccaggcaggcggctcgtgaggtcaagagattgagatcagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgcacacctgtagtgccagctactcaggagactaaggcaggagaattgcttgaaccctgga---ggtggaggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcaatgg-------------aga-g--agactccatct
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2247 241 -     10723 ttgggaggcccaggcaggcggctcgtgaggtcaagagattgagatcagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgcacacctgtagtgccagctactcaggagactaaggcaggagaattgcttgaaccctgga---ggtggaggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcaatgg-------------aga-g--agactccatct
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1400 241 +      9834 ttgggaggcccaggcaggcggctcgtgaggtcaagagattgagatcagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgcacacctgtagtgccagctactcaggagactaaggcaggagaattgcttgaaccctgga---ggtggaggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcaatgg-------------aga-g--agactccatct
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19718 241 +     32220 ttgggaggcccaggcaggcggctcgtgaggtcaagagattgagatcagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgcacacctgtagtgccagctactcaggagactaaggcaggagaattgcttgaaccctgga---ggtggaggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcaatgg-------------aga-g--agactccatct
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5933815 241 +   6242583 ttgggaggcccaggcaggcggctcgtgaggtcaagagattgagatcagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgcacacctgtagtgccagctactcaggagactaaggcaggagaattgcttgaaccctgga---ggtggaggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcaatgg-------------aga-g--agactccatct
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        3060 241 +     20839 ttgggaggcccaggcaggcggctcgtgaggtcaagagattgagatcagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgcacacctgtagtgccagctactcaggagactaaggcaggagaatcgcttgaaccctgga---ggtggaggtttcaa-tgagccgaaattgcaccact--gcactccagcctgggcaatgg-------------ata-g--agactccatct
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9704   0 -     10935 C
e Loris_tardigradus.ctg83                                   999590   0 +   6120653 C
e Loris_lydekkerianus.k141_2539221                             754   0 +     11245 C
e Perodicticus_potto.k141_1092580                             3108   0 +     25941 C
e Perodicticus_ibeanus.k141_855320                            4740   0 +     13100 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            11488   0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      10062   0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_63728          1907   0 +      2932 C
e Xerus_inauris.XerIna_scaffold_48378                        19790   0 -     24430 C
e Vulpes_lagopus.VulLag_flattened_line_30954                  7452   0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5368464   0 -   5488506 C
e Varecia_variegata.k141_1128296                              7164   0 +     24756 C
e Varecia_rubra.k141_590885                                   7116   0 +     50397 C
e Ursus_maritimus.KK499267.1                               4846982   0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   51598   0 -     77625 C
e Tursiops_truncatus.MRVK01000835.1                       15737796   0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     3279   0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2149688   0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                    741   0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79036   0 +    610378 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   1929   0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103258   0 +    114563 C
e Tarsius_wallacei.k141_780063                               15031   0 +     25099 C
e Tarsius_lariang.k141_2201908                               10726   0 +     70052 C
e Tapirus_terrestris.TapTer_scaffold_755                    383733   0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      115278   0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 69541   0 +    116680 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                 6890   0 +     41958 C
e Sus_scrofa.CM000828.4                                   62882534   0 -  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629              14266   0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             27280   0 +     97271 C
e Spermophilus_dauricus.KZ294078.1                         1948294   0 -   3870691 C
e Sorex_araneus.JH798187.1                                13647104   0 -  18376816 C
e Solenodon_paradoxus.SolPar_flattened_line_5840            187731   1 -    191337 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359   0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    151437   0 -    313613 C
e Saiga_tatarica.SaiTat_scaffold_373180                       3623   0 +      4321 C
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                84742   0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        366972   1 -   3329780 I
e Rattus_norvegicus.chr8                                  20366427  90 + 133307652 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4973   0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20270348   0 -  38429054 C
e Pteropus_vampyrus.KN534172.1                                1693   0 -      8028 C
e Pteropus_alecto.KB030862.1                              22973756   0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         36739   0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            11284   0 -     21811 C
e Psammomys_obesus.NESX01036370.1                             5629  60 -     21651 I
e Propithecus_verreauxi.k141_956661                            485   0 -      6182 C
e Propithecus_tattersalli.k141_790011                        24240   0 -     67325 C
e Propithecus_perrieri.k141_1200571                            428   0 -     24134 C
e Propithecus_edwardsi.k141_1176054                          22245   0 +     35766 C
e Propithecus_diadema.k141_357118                              887   0 +      4256 C
e Propithecus_coronatus.k141_347390                          24726   0 +     38485 C
e Propithecus_coquerelli.NW_012148875.1                     986437   0 +   2598838 C
e Prolemur_simus.MPIZ01000396.1                            2592423   0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10073   0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           34302   0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              512   0 +     22620 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               8596   0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     25917   7 -     29689 I
e Peromyscus_maniculatus.KI615324.1                       18187645  53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25352   0 +     32600 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8916   0 -     78924 C
e Pantholops_hodgsonii.KE114653.1                          1264435   0 -   2937107 C
e Panthera_tigris.KE722367.1                               4717037   0 -   8748460 C
e Panthera_pardus.KV860321.1                                259890   0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  147181   0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      173502   0 -    191736 C
e Ovis_aries.CM001607.2                                   17585081   0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       458791   0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                        67144556   0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7131   0 -     18566 C
e Orcinus_orca.KB316932.1                                  2781549   0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859  53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750  60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144725   0 +    630418 C
e Odobenus_rosmarus.KB229312.1                              500785   0 -   2017862 C
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1355821   0 +   3988456 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744985   0 + 199412804 C
e Nycticebus_coucang.k141_5327727                             2244   0 +      8486 C
e Nycticebus_bengalensis.LG01                            102574558   0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9146037   0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    756462   0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5865634   0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.KL204047.1                            2025576   0 -   3037898 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186179   0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        32687   0 +     33610 C
e Myotis_lucifugus.GL429869.1                              3902127   0 -   4330536 C
e Myotis_davidii.KB100139.1                                1585919   0 -   6019432 C
e Myotis_brandtii.KE162005.1                                278362   0 -  10118263 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               297728   0 -  14710649 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              2406   0 +     14296 C
e Murina_feae.MurFea_scaffold_85699                           5192   0 +     14753 C
e Mungos_mungo.MunMun_flattened_line_23663                   31397   0 +     37127 C
e Moschus_moschiferus.MosMos_scaffold_13123                    404   0 +     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 137893   0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    26678   0 -    437263 C
e Mirza_zaza.k141_952172                                      4740   0 -     37649 C
e Mirounga_angustirostris.MirAng_flattened_line_22144        62496   0 -     63350 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33041   0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849165   0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11256415  59 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                13492   0 -     19307 C
e Microgale_talazaci.MicTal_scaffold_6613                    15448   0 -    145209 C
e Microcebus_murinus.CM007674.1                           18283386   0 -  93316391 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3173   0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995  59 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365              6297   0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                         6848   0 -    207569 C
e Marmota_marmota.CZRN01000018.1                          33097502   0 -  40650429 C
e Manis_pentadactyla.KN006162.1                              47065   0 -    317179 C
e Manis_javanica.JSZB01003497.1                              15676   0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 87595   0 +     94391 C
e Lycaon_pictus.CM007581.1                                17951776   0 -  59628241 C
e Loxodonta_africana.GL010049.1                            4214583   0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             267557   0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3712   0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3036166   0 +   3914936 C
e Lepilemur_septentrionalis.k141_185316                      22862   0 +     54090 C
e Lepilemur_ruficaudatus.k141_420445                         31720   0 -     32627 C
e Lepilemur_dorsalis.k141_577674                             24807   0 +     45836 C
e Lepilemur_ankaranensis.k141_596936                          6860   0 -     23766 C
e Lemur_catta.scaffold_24                                 15519770   0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12310 257 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                1772   0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8271430   0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               22505   0 +     23964 C
e Indri_indri.k141_3655594                                   18226   0 +     31101 C
e Ictidomys_tridecemlineatus.JH393364.1                    7514652   0 -   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                      80993   0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19920   0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  40662   0 +     55795 C
e Hipposideros_galeritus.HipGal_scaffold_29171               39868   1 +     43066 I
e Hipposideros_armiger.JXIK01000431.1                       108427   1 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112108   0 +    128679 C
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 312   0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20659450   7 +  22651954 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17550   0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               238196   0 +    327341 C
e Hapalemur_occidentalis.k141_907772                          9243   0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9411   0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9307   0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7670   0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2526   0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   30140   0 +     78134 C
e Glis_glis.GliGli_scaffold_19807                            30412   0 +     49224 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_56069               25525   0 +     26054 C
e Galagoides_demidoff.k141_31856                              3217   0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848567   7 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  5559   0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20192034   0 + 205367284 C
e Eulemur_sanfordi.k141_1122526                               9441   0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2273   0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9256   0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6330   0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8378   0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9635   0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8378   0 +     26330 C
e Eulemur_coronatus.k141_885031                              11193   0 -     25546 C
e Eulemur_collaris.k141_377015                                2160   0 -     16928 C
e Eulemur_albifrons.k141_342033                               9462   0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             24901   0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           10964   0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3325391   0 -   7059049 C
e Equus_przewalskii.KK951119.1                               29668   0 +    498745 C
e Equus_caballus.CM000403.2                               18527653   0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1279832   0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2144131   0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16325830   0 -  41312741 C
e Ellobius_talpinus.LOJH01123422.1                            3447  60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497  60 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089072   0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       310353   0 +    607251 C
e Eidolon_helvum.KE759718.1                                   7487   0 +     11740 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 31558   0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12077   0 +     14536 C
e Dipodomys_ordii.KN672350.1                              18895859   0 +  37912305 C
e Dinomys_branickii.DinBra_scaffold_21862                    34344   1 +     67921 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    2556   0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  669484   0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8627981   0 +  20541912 C
e Delphinapterus_leucas.KZ290073.1                        16811288   0 +  35494412 C
e Daubentonia_madagascariensis.ctg71                      12532954   0 -  12879189 C
e Dasypus_novemcinctus.JH564415.1                            61143   0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1304   0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 2921   0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294  44 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             24278   0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_603213              1136 296 +      1923 I
e Cricetulus_griseus.LT883664.1                           11663691  60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705  59 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          10566   0 -     20389 C
e Condylura_cristata.JH655891.1                           17546056   0 -  53390261 C
e Choloepus_hoffmanni.KN194906.1                            170331   0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15232   0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1248566   0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           12133   0 +     57038 C
e Cheirogaleus_major.k141_333249                             16784   0 -     52598 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            4873   0 -      6351 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2666   0 -      3715 C
e Cephalopachus_bancanus.k141_2037105                         5027   0 -      8605 C
e Cavia_tschudii.CavTsc_scaffold_8919                        98672   0 +    143979 C
e Cavia_porcellus.DS562891.1                              18359795   0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18347535   0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     89317   0 +    217609 C
e Castor_canadensis.CasCan_scaffold_2074                    133707   0 +    179628 C
e Carollia_perspicillata.CarPer_scaffold_92756                2950   0 -     11696 C
e Carlito_syrichta.NW_007259797.1                           141111   0 -    496798 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18060066   0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18829346   0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18496837   0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17955536   0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9031272   0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    181885   0 -    185531 C
e CanFam4.chr16                                           17795828   0 -  60362399 C
e Camelus_ferus.KB017975.1                                  399713   0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2331437   0 -   7040546 C
e Camelus_bactrianus.KN276810.1                            9998973   0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2818524   0 +   4408762 C
e Bos_taurus.CM000203.6                                   18083035   0 +  45695690 C
e Bos_mutus.JH880303.1                                     1124957   0 -   1948126 C
e Bos_indicus.CM003047.1                                  20272397   0 +  48749331 C
e Bison_bison.KN261452.1                                    199192   0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    26150   0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2118   0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15191652   0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              49991   0 +     85213 C
e Avahi_laniger.k141_765380                                  49366   0 -     92717 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  2532   0 +     43469 C
e Arctocebus_calabarensis.k141_288239                        14504   0 +     17124 C
e Aplodontia_rufa.AprRuf_scaffold_68852                       7335   0 +     20879 C
e Antilocapra_americana.AntAmePen_scaffold_12469             97683   0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183176   0 +    412891 C
e Ammotragus_lervia.NIVO01071767.1                          675228   0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     65041   0 -     89534 C
e Ailurus_fulgens.LNAC01001112.1                             75271   0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9507047   0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458  60 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           823334   0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       1686  6 +     62944 c-----a-----------aaaa
s Allenopithecus_nigroviridis.k141_3361533                    9682  9 -     52922 a-----aaaaa-------aaa-
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9609 10 -     28001 a-----aaaaa-------aaaa
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_310680                           9735 10 -      9772 a-----aaaaa-------aaaa
i Allochrocebus_preussi.k141_310680                      C 0 C 0
s Allochrocebus_solatus.k141_166128                            892 10 -     12518 a-----aaaaa-------aaaa
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470643  8 +   4669795 a-----aaaaa-------aa--
i Cercocebus_atys.KQ010504.1                             C 0 I 2
s Cercocebus_chrysogaster.k141_393940                         9192  8 -     19203 a-----aaaaa-------aa--
i Cercocebus_chrysogaster.k141_393940                    C 0 I 2
s Cercocebus_lunulatus.k141_3846941                           3611  8 +      8260 a-----aaaaa-------aa--
i Cercocebus_lunulatus.k141_3846941                      C 0 I 2
s Cercocebus_torquatus.k141_3057011                           3841  8 +     27781 a-----aaaaa-------aa--
i Cercocebus_torquatus.k141_3057011                      C 0 I 2
s Cercopithecus_ascanius.k141_1024104                         3997  9 -     20310 a-----aaaaaaa-----a---
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           6981  9 +     29689 a-----aaaaaaa-----a---
i Cercopithecus_cephus.k141_1078548                      C 0 I 1
s Cercopithecus_diana.k141_2427854                            1409 12 +      9989 a-----aaaaaaa-----aaaa
i Cercopithecus_diana.k141_2427854                       I 75 C 0
s Cercopithecus_hamlyni.k141_187466                           9670  1 -     27936 ---------------------a
i Cercopithecus_hamlyni.k141_187466                      I 1 C 0
s Cercopithecus_lowei.k141_457449                             9688 13 -     11289 a-----aaaaaaaa----aaaa
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38812064  9 +  39242232 a-----aaaaaaa-----a---
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217755 17 -  21565898 a-----aaaaaaaaaaaaaaaa
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34875 12 -     53127 a-----aaaaaaa-----aaaa
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s Cercopithecus_nictitans.k141_3278028                        2167  8 +      7159 a-----aaaaaa------a---
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s Cercopithecus_petaurista.k141_807961                        9680 14 -     27947 aaaaaaaaaaaaa-----a---
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9656 14 +     17596 a-----aaaaaaaaa---aaaa
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         40150 12 -     41420 a-----aaaaaaa-----aaaa
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chlorocebus_aethiops.ctg25                              18423619 10 -  18827391 a-----aaaaa-------aaaa
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       10062 10 -     50209 a-----aaaaa-------aaaa
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135417066 10 + 135778131 a-----aaaaa-------aaaa
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1905586 10 +   2368649 a-----aaaaa-------aaaa
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199945256  4 + 200372422 ------------------taaa
i Colobus_guereza.LG01                                   I 4 C 0
s Colobus_polykomos.k141_906115                              32127  4 +     84244 ------------------aaaa
i Colobus_polykomos.k141_906115                          I 4 C 0
s Gorilla_beringei.k141_2022027                               2337 10 +      3305 c-----aaaaa-------aaaa
i Gorilla_beringei.k141_2022027                          I 241 I 194
s Gorilla_gorilla.LT578341.1                             186333071  4 + 186649187 ------------------aaaa
i Gorilla_gorilla.LT578341.1                             I 3 C 0
s Hoolock_leuconedys.ctg274                                    429808 10 +    630532 c-----aaaaa-------aaga
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_307679                               12740  7 -     15490 c-----aaaaa-------a---
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              54745  9 +     67168 c-----aaaaaaa-----a---
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189538397  7 - 191637585 c-----aaaaa-------a---
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3331290  7 -  11177569 c-----aaaaa-------a---
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1432193  2 +   1826925 ------------------aa--
i Lophocebus_aterrimus.ctg367                            I 3 I 2
s Macaca_arctoides.k141_2326796                               2001 10 +     40492 a-----aaaaa-------aaaa
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59671261  9 +  60120075 a-----aaaaa-------aaa-
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7759 10 -     26193 a-----aaaaa-------aaaa
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75553 10 -    114318 a-----aaaaa-------aaaa
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  1272 10 -     23192 a-----aaaaa-------aaaa
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10725 10 -     29190 a-----aaaaa-------aaaa
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  19292 10 +     37952 a-----aaaaa-------aaaa
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834379 10 + 187317192 a-----aaaaa-------aaaa
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452941 10 -  25927173 a-----aaaaa-------aaaa
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  75141 10 +     89720 a-----aaaaa-------aaaa
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 2138 10 +     20474 a-----aaaaa-------aaaa
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1939 10 -     14993 a-----aaaaa-------aaaa
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324812 10 -    668171 a-----aaaaa-------aaaa
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                  245  8 -     24072 a-----aaaaa-------aa--
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               20878 11 -     45290 aa----aaaaa-------aaaa
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23932430  8 -  24302211 a-----aaaaa-------aa--
i Mandrillus_leucophaeus.scaffold280                     C 0 I 2
s Mandrillus_sphinx.Contig270                               346608  8 +    752769 a-----aaaaa-------aa--
i Mandrillus_sphinx.Contig270                            C 0 I 2
s Miopithecus_ogouensis.k141_534055                           4175 12 -     28506 a-----aaaaaaa-----aaaa
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Nasalis_larvatus.k141_413338                               10178 10 +     21681 a-----aaaaa-------aaaa
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Pan_paniscus.KQ411613.1                                    39036 10 +     80009 c-----aaaaa-------aaaa
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189137931 10 + 189151597 c-----aaaaa-------aaaa
i Pan_troglodytes.CM009242.2                             I 71 I 12
s Papio_anubis.CM001495.2                                183438223  2 + 183742232 ------------------aa--
i Papio_anubis.CM001495.2                                I 3 I 2
s Papio_cynocephalus.k141_4307930                             1916  2 +     20448 ------------------aa--
i Papio_cynocephalus.k141_4307930                        I 3 I 2
s Papio_hamadryas.Contig39                                20558721  2 +  20919399 ------------------aa--
i Papio_hamadryas.Contig39                               I 3 I 2
s Papio_kindae.k141_1936966                                    659  2 +     41871 ------------------aa--
i Papio_kindae.k141_1936966                              I 3 I 2
s Papio_papio.k141_802527                                     3945  2 +     27711 ------------------aa--
i Papio_papio.k141_802527                                I 3 I 2
s Papio_ursinus.k141_3428135                                  4030  2 +      9205 ------------------aa--
i Papio_ursinus.k141_3428135                             I 3 I 2
s Piliocolobus_badius.k141_1234363                           38686  2 +     62158 a-----a---------------
i Piliocolobus_badius.k141_1234363                       C 0 I 3
s Piliocolobus_gordonorum.k141_381342                        33413  1 +     89929 a---------------------
i Piliocolobus_gordonorum.k141_381342                    C 0 I 14
s Piliocolobus_kirkii.k141_448987                            34829  1 +     51399 a---------------------
i Piliocolobus_kirkii.k141_448987                        C 0 I 14
s Piliocolobus_tephrosceles.PDMG02000141.1                14291050 10 -  14605196 a-----aaaaa-------aaaa
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189126112  8 + 189387572 c-----aaa---------aaaa
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9565716 10 +   9816681 c-----aaaaa-------aaaa
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68338 10 -     81375 a-----aaaaa-------aaaa
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                               159 10 +     19060 a-----aaaaa-------aaaa
i Presbytis_mitrata.k141_1087752                         N 0 C 0
s Pygathrix_cinerea.k141_1153803                             10167 10 -     91421 a-----aaaaa-------aaaa
i Pygathrix_cinerea.k141_1153803                         C 0 I 4
s Pygathrix_nigripes_b.ctg100                                 7604300 10 +   7812017 a-----aaaaa-------aaaa
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10140 10 -     72585 a-----aaaaa-------aaaa
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             1853 10 -     11128 a-----aaaaa-------aaaa
i Rhinopithecus_bieti.k119_217274                        C 0 I 2
s Rhinopithecus_roxellana.NC_044550.1                     91231210 10 - 195417433 a-----aaaaa-------aaaa
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7666858 10 +   7961872 a-----aaaaa-------aaaa
i Rhinopithecus_strykeri.ctg102                          C 0 I 1
s Semnopithecus_entellus.k141_11662                          14682 12 -     19888 a-----aaaaaaaaa---aa--
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21887  9 +     39453 a-----aaaaaa------aa--
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2411 11 +     27826 a-----aaaaaaga----aa--
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1933 10 -     19483 a-----aaaaaaa-----aa--
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      1995 10 +      7198 a-----aaaaaaa-----aa--
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         10256  9 +     15514 a-----aaaaaa------aa--
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1088438 10 -   1523678 c-----aaaaa-------aaaa
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Theropithecus_gelada.CM009954.1                        186423267  2 + 186847797 ------------------aa--
i Theropithecus_gelada.CM009954.1                        I 3 I 2
s Trachypithecus_auratus.k141_722599                          5989  7 -     20410 a-----aaaa--------aa--
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    10184  8 +     15221 a-----aaaaa-------aa--
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        6089  8 +     19930 a-----aaaaa-------aa--
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2519  8 -     19997 a-----aaaaa-------aa--
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42638  8 -     60166 a-----aaaaa-------aa--
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        10110  9 -     27529 a-----aaaaaa------aa--
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     10050  9 -     18194 a-----aaaaaa------aa--
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3786  8 -     21137 a-----aaaaa-------aa--
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2488  9 -     10723 a-----aaaaaa------aa--
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1641  8 +      9834 a-----aaaaa-------aa--
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19959  8 +     32220 a-----aaaaa-------aa--
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5934056  8 +   6242583 a-----aaaaa-------aa--
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        3301  8 +     20839 a-----aaaaa-------aa--
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9704  0 -     10935 C
e Loris_tardigradus.ctg83                                   999590  0 +   6120653 C
e Loris_lydekkerianus.k141_2539221                             754  0 +     11245 C
e Perodicticus_potto.k141_1092580                             3108  0 +     25941 C
e Perodicticus_ibeanus.k141_855320                            4740  0 +     13100 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            11488  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      10062  0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_63728          1907  0 +      2932 C
e Xerus_inauris.XerIna_scaffold_48378                        19790  0 -     24430 C
e Vulpes_lagopus.VulLag_flattened_line_30954                  7452  0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5368464  0 -   5488506 C
e Varecia_variegata.k141_1128296                              7164  0 +     24756 C
e Varecia_rubra.k141_590885                                   7116  0 +     50397 C
e Ursus_maritimus.KK499267.1                               4846982  0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   51598  0 -     77625 C
e Tursiops_truncatus.MRVK01000835.1                       15737796  0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     3279  0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2149688  0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                    741  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79036  0 +    610378 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   1929  0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103258  0 +    114563 C
e Tarsius_wallacei.k141_780063                               15031  0 +     25099 C
e Tarsius_lariang.k141_2201908                               10726  0 +     70052 C
e Tapirus_terrestris.TapTer_scaffold_755                    383733  0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      115278  0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 69541  0 +    116680 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                 6890  0 +     41958 C
e Sus_scrofa.CM000828.4                                   62882534  0 -  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629              14266  0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             27280  0 +     97271 C
e Spermophilus_dauricus.KZ294078.1                         1948294  0 -   3870691 C
e Sorex_araneus.JH798187.1                                13647104  0 -  18376816 C
e Solenodon_paradoxus.SolPar_flattened_line_5840            187731  1 -    191337 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    151437  0 -    313613 C
e Saiga_tatarica.SaiTat_scaffold_373180                       3623  0 +      4321 C
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                84742  0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        366972  1 -   3329780 I
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4973  0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20270348  0 -  38429054 C
e Pteropus_vampyrus.KN534172.1                                1693  0 -      8028 C
e Pteropus_alecto.KB030862.1                              22973756  0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         36739  0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            11284  0 -     21811 C
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Propithecus_verreauxi.k141_956661                            485  0 -      6182 C
e Propithecus_tattersalli.k141_790011                        24240  0 -     67325 C
e Propithecus_perrieri.k141_1200571                            428  0 -     24134 C
e Propithecus_edwardsi.k141_1176054                          22245  0 +     35766 C
e Propithecus_diadema.k141_357118                              887  0 +      4256 C
e Propithecus_coronatus.k141_347390                          24726  0 +     38485 C
e Propithecus_coquerelli.NW_012148875.1                     986437  0 +   2598838 C
e Prolemur_simus.MPIZ01000396.1                            2592423  0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10073  0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           34302  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              512  0 +     22620 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               8596  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     25917  7 -     29689 I
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25352  0 +     32600 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8916  0 -     78924 C
e Pantholops_hodgsonii.KE114653.1                          1264435  0 -   2937107 C
e Panthera_tigris.KE722367.1                               4717037  0 -   8748460 C
e Panthera_pardus.KV860321.1                                259890  0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  147181  0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      173502  0 -    191736 C
e Ovis_aries.CM001607.2                                   17585081  0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       458791  0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7131  0 -     18566 C
e Orcinus_orca.KB316932.1                                  2781549  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144725  0 +    630418 C
e Odobenus_rosmarus.KB229312.1                              500785  0 -   2017862 C
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1355821  0 +   3988456 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744985  0 + 199412804 C
e Nycticebus_coucang.k141_5327727                             2244  0 +      8486 C
e Nycticebus_bengalensis.LG01                            102574558  0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9146037  0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    756462  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5865634  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.KL204047.1                            2025576  0 -   3037898 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186179  0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        32687  0 +     33610 C
e Myotis_lucifugus.GL429869.1                              3902127  0 -   4330536 C
e Myotis_davidii.KB100139.1                                1585919  0 -   6019432 C
e Myotis_brandtii.KE162005.1                                278362  0 -  10118263 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               297728  0 -  14710649 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              2406  0 +     14296 C
e Murina_feae.MurFea_scaffold_85699                           5192  0 +     14753 C
e Mungos_mungo.MunMun_flattened_line_23663                   31397  0 +     37127 C
e Moschus_moschiferus.MosMos_scaffold_13123                    404  0 +     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 137893  0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    26678  0 -    437263 C
e Mirza_zaza.k141_952172                                      4740  0 -     37649 C
e Mirounga_angustirostris.MirAng_flattened_line_22144        62496  0 -     63350 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33041  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849165  0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                13492  0 -     19307 C
e Microgale_talazaci.MicTal_scaffold_6613                    15448  0 -    145209 C
e Microcebus_murinus.CM007674.1                           18283386  0 -  93316391 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3173  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365              6297  0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                         6848  0 -    207569 C
e Marmota_marmota.CZRN01000018.1                          33097502  0 -  40650429 C
e Manis_pentadactyla.KN006162.1                              47065  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              15676  0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 87595  0 +     94391 C
e Lycaon_pictus.CM007581.1                                17951776  0 -  59628241 C
e Loxodonta_africana.GL010049.1                            4214583  0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             267557  0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3036166  0 +   3914936 C
e Lepilemur_septentrionalis.k141_185316                      22862  0 +     54090 C
e Lepilemur_ruficaudatus.k141_420445                         31720  0 -     32627 C
e Lepilemur_dorsalis.k141_577674                             24807  0 +     45836 C
e Lepilemur_ankaranensis.k141_596936                          6860  0 -     23766 C
e Lemur_catta.scaffold_24                                 15519770  0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12310 257 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                1772  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8271430  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               22505  0 +     23964 C
e Indri_indri.k141_3655594                                   18226  0 +     31101 C
e Ictidomys_tridecemlineatus.JH393364.1                    7514652  0 -   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                      80993  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19920  0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  40662  0 +     55795 C
e Hipposideros_galeritus.HipGal_scaffold_29171               39868  1 +     43066 I
e Hipposideros_armiger.JXIK01000431.1                       108427  1 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112108  0 +    128679 C
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 312  0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20659450  7 +  22651954 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17550  0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               238196  0 +    327341 C
e Hapalemur_occidentalis.k141_907772                          9243  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9411  0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9307  0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7670  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2526  0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   30140  0 +     78134 C
e Glis_glis.GliGli_scaffold_19807                            30412  0 +     49224 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_56069               25525  0 +     26054 C
e Galagoides_demidoff.k141_31856                              3217  0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848567  7 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  5559  0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20192034  0 + 205367284 C
e Eulemur_sanfordi.k141_1122526                               9441  0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2273  0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9256  0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6330  0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8378  0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9635  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8378  0 +     26330 C
e Eulemur_coronatus.k141_885031                              11193  0 -     25546 C
e Eulemur_collaris.k141_377015                                2160  0 -     16928 C
e Eulemur_albifrons.k141_342033                               9462  0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             24901  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           10964  0 +    133382 C
e Erythrocebus_patas.Contig38                             21200279  0 -  21539334 C
e Erinaceus_europaeus.JH835339.1                           3325391  0 -   7059049 C
e Equus_przewalskii.KK951119.1                               29668  0 +    498745 C
e Equus_caballus.CM000403.2                               18527653  0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1279832  0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2144131  0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16325830  0 -  41312741 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089072  0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       310353  0 +    607251 C
e Eidolon_helvum.KE759718.1                                   7487  0 +     11740 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 31558  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12077  0 +     14536 C
e Dipodomys_ordii.KN672350.1                              18895859  0 +  37912305 C
e Dinomys_branickii.DinBra_scaffold_21862                    34344  1 +     67921 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    2556  0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  669484  0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8627981  0 +  20541912 C
e Delphinapterus_leucas.KZ290073.1                        16811288  0 +  35494412 C
e Daubentonia_madagascariensis.ctg71                      12532954  0 -  12879189 C
e Dasypus_novemcinctus.JH564415.1                            61143  0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1304  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 2921  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             24278  0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_603213              1136 296 +      1923 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          10566  0 -     20389 C
e Condylura_cristata.JH655891.1                           17546056  0 -  53390261 C
e Choloepus_hoffmanni.KN194906.1                            170331  0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15232  0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1248566  0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           12133  0 +     57038 C
e Cheirogaleus_major.k141_333249                             16784  0 -     52598 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            4873  0 -      6351 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2666  0 -      3715 C
e Cephalopachus_bancanus.k141_2037105                         5027  0 -      8605 C
e Cavia_tschudii.CavTsc_scaffold_8919                        98672  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18359795  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18347535  0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     89317  0 +    217609 C
e Castor_canadensis.CasCan_scaffold_2074                    133707  0 +    179628 C
e Carollia_perspicillata.CarPer_scaffold_92756                2950  0 -     11696 C
e Carlito_syrichta.NW_007259797.1                           141111  0 -    496798 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18060066  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18829346  0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18496837  0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17955536  0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9031272  0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    181885  0 -    185531 C
e CanFam4.chr16                                           17795828  0 -  60362399 C
e Camelus_ferus.KB017975.1                                  399713  0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2331437  0 -   7040546 C
e Camelus_bactrianus.KN276810.1                            9998973  0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2818524  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18083035  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1124957  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20272397  0 +  48749331 C
e Bison_bison.KN261452.1                                    199192  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    26150  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2118  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15191652  0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              49991  0 +     85213 C
e Avahi_laniger.k141_765380                                  49366  0 -     92717 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  2532  0 +     43469 C
e Arctocebus_calabarensis.k141_288239                        14504  0 +     17124 C
e Aplodontia_rufa.AprRuf_scaffold_68852                       7335  0 +     20879 C
e Antilocapra_americana.AntAmePen_scaffold_12469             97683  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183176  0 +    412891 C
e Ammotragus_lervia.NIVO01071767.1                          675228  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     65041  0 -     89534 C
e Ailurus_fulgens.LNAC01001112.1                             75271  0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9507047  0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           823334  0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       1692 2 +     62944 a---a
s Allochrocebus_lhoesti.k141_4309873                          9619 2 -     28001 a---a
i Allochrocebus_lhoesti.k141_4309873                     C 0 I 2
s Allochrocebus_preussi.k141_310680                           9745 2 -      9772 a---a
i Allochrocebus_preussi.k141_310680                      C 0 I 2
s Allochrocebus_solatus.k141_166128                            902 2 -     12518 a---a
i Allochrocebus_solatus.k141_166128                      C 0 I 2
s Cercopithecus_ascanius.k141_1024104                         4006 2 -     20310 a---a
i Cercopithecus_ascanius.k141_1024104                    C 0 I 3
s Cercopithecus_cephus.k141_1078548                           6991 2 +     29689 a---a
i Cercopithecus_cephus.k141_1078548                      I 1 I 3
s Cercopithecus_diana.k141_2427854                            1421 2 +      9989 a---a
i Cercopithecus_diana.k141_2427854                       C 0 I 2
s Cercopithecus_hamlyni.k141_187466                           9671 2 -     27936 a---a
i Cercopithecus_hamlyni.k141_187466                      C 0 I 2
s Cercopithecus_lowei.k141_457449                             9701 2 -     11289 a---a
i Cercopithecus_lowei.k141_457449                        C 0 I 3
s Cercopithecus_albogularis.ctg5                                38812073 2 +  39242232 a---a
i Cercopithecus_albogularis.ctg5                               C 0 I 3
s Cercopithecus_mona.ctg39                                21217772 2 -  21565898 a---a
i Cercopithecus_mona.ctg39                               C 0 I 3
s Cercopithecus_neglectus.k141_2526306                       34887 2 -     53127 a---a
i Cercopithecus_neglectus.k141_2526306                   C 0 I 3
s Cercopithecus_nictitans.k141_3278028                        2175 2 +      7159 a---a
i Cercopithecus_nictitans.k141_3278028                   C 0 I 3
s Cercopithecus_petaurista.k141_807961                        9694 2 -     27947 a---a
i Cercopithecus_petaurista.k141_807961                   C 0 I 3
s Cercopithecus_pogonias.k141_822820                          9670 2 +     17596 a---a
i Cercopithecus_pogonias.k141_822820                     C 0 I 3
s Cercopithecus_roloway.k141_3180641                         40162 2 -     41420 a---a
i Cercopithecus_roloway.k141_3180641                     C 0 I 2
s Chlorocebus_aethiops.ctg25                              18423629 2 -  18827391 a---a
i Chlorocebus_aethiops.ctg25                             C 0 I 2
s Chlorocebus_pygerythrus.k141_1025673                       10072 2 -     50209 a---a
i Chlorocebus_pygerythrus.k141_1025673                   C 0 I 2
s Chlorocebus_sabaeus.CM001947.1                         135417076 2 + 135778131 a---a
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 2
s Colobus_angolensis.KN981557.1                            1905596 2 +   2368649 a---a
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199945260 2 + 200372422 a---a
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              32131 2 +     84244 a---a
i Colobus_polykomos.k141_906115                          C 0 C 0
s Gorilla_beringei.k141_3596273                              10926 2 -     32273 a---a
i Gorilla_beringei.k141_3596273                          I 8 C 0
s Gorilla_gorilla.LT578341.1                             186333075 2 + 186649187 a---a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hoolock_leuconedys.ctg274                                    429818 2 +    630532 a---a
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_307679                               12747 2 -     15490 a---a
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              54754 2 +     67168 a---a
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189538404 2 - 191637585 a---a
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3331297 2 -  11177569 a---a
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Macaca_arctoides.k141_2326796                               2011 5 +     40492 aaaaa
i Macaca_arctoides.k141_2326796                          C 0 I 2
s Macaca_assamensis.Contig5                               59671270 1 +  60120075 ----a
i Macaca_assamensis.Contig5                              C 0 I 2
s Macaca_cyclopis.k119_18836                                  7769 2 -     26193 a---a
i Macaca_cyclopis.k119_18836                             C 0 I 2
s Macaca_fascicularis.k141_814140                            75563 5 -    114318 aaaaa
i Macaca_fascicularis.k141_814140                        C 0 I 2
s Macaca_fuscata.k119_255327                                  1282 2 -     23192 a---a
i Macaca_fuscata.k119_255327                             C 0 I 2
s Macaca_leonina.k141_3550399                                10735 2 -     29190 a---a
i Macaca_leonina.k141_3550399                            C 0 I 2
s Macaca_maura.k141_2733130                                  19302 2 +     37952 a---a
i Macaca_maura.k141_2733130                              C 0 I 2
s Macaca_mulatta.NC_041758.1                             186834389 2 + 187317192 a---a
i Macaca_mulatta.NC_041758.1                             C 0 I 2
s Macaca_nemestrina.KQ007038.1                            25452951 2 -  25927173 a---a
i Macaca_nemestrina.KQ007038.1                           C 0 I 2
s Macaca_nigra.k141_1655396                                  75151 2 +     89720 a---a
i Macaca_nigra.k141_1655396                              C 0 I 2
s Macaca_radiata.k141_3680011                                 2148 2 +     20474 a---a
i Macaca_radiata.k141_3680011                            C 0 I 2
s Macaca_siberu.k141_635500                                   1949 2 -     14993 a---a
i Macaca_siberu.k141_635500                              C 0 I 2
s Macaca_silenus.Contig273                                  324822 2 -    668171 a---a
i Macaca_silenus.Contig273                               C 0 I 2
s Macaca_thibetana.k99_256239                                  253 1 -     24072 ----a
i Macaca_thibetana.k99_256239                            C 0 I 2
s Macaca_tonkeana.k141_1498238                               20889 2 -     45290 a---a
i Macaca_tonkeana.k141_1498238                           C 0 I 2
s Miopithecus_ogouensis.k141_534055                           4187 2 -     28506 a---a
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Nasalis_larvatus.k141_413338                               10188 1 +     21681 a----
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Pan_paniscus.KQ411613.1                                    39046 2 +     80009 a---a
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.KZ622849.1                                 17225 2 +    110857 a---a
i Pan_troglodytes.KZ622849.1                             I 611 I 171
s Piliocolobus_tephrosceles.PDMG02000141.1                14291060 2 -  14605196 a---a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189126120 2 + 189387572 a---a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9565726 2 +   9816681 a---a
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68348 2 -     81375 a---a
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                               169 2 +     19060 a---a
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Pygathrix_cinerea.k141_1153803                             10181 1 -     91421 a----
i Pygathrix_cinerea.k141_1153803                         I 4 C 0
s Pygathrix_nigripes_b.ctg100                                 7604310 1 +   7812017 a----
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10150 1 -     72585 a----
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             1865 1 -     11128 a----
i Rhinopithecus_bieti.k119_217274                        I 2 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91231220 1 - 195417433 a----
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7666869 1 +   7961872 a----
i Rhinopithecus_strykeri.ctg102                          I 1 C 0
s Symphalangus_syndactylus.tarseq_199                      1088448 2 -   1523678 a---a
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9704 0 -     10935 C
e Loris_tardigradus.ctg83                                   999590 0 +   6120653 C
e Loris_lydekkerianus.k141_2539221                             754 0 +     11245 C
e Perodicticus_potto.k141_1092580                             3108 0 +     25941 C
e Perodicticus_ibeanus.k141_855320                            4740 0 +     13100 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            11488 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      10062 0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_63728          1907 0 +      2932 C
e Xerus_inauris.XerIna_scaffold_48378                        19790 0 -     24430 C
e Vulpes_lagopus.VulLag_flattened_line_30954                  7452 0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5368464 0 -   5488506 C
e Varecia_variegata.k141_1128296                              7164 0 +     24756 C
e Varecia_rubra.k141_590885                                   7116 0 +     50397 C
e Ursus_maritimus.KK499267.1                               4846982 0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   51598 0 -     77625 C
e Tursiops_truncatus.MRVK01000835.1                       15737796 0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     3279 0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2149688 0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                    741 0 -      1748 C
e Trachypithecus_pileatus.k141_2007326                        3309 0 +     20839 C
e Trachypithecus_phayrei.ctg124                            5934064 0 +   6242583 C
e Trachypithecus_obscurus.k141_190785                        19967 0 +     32220 C
e Trachypithecus_melamera.k141_434728                         1649 0 +      9834 C
e Trachypithecus_leucocephalus.k141_587342                    2497 0 -     10723 C
e Trachypithecus_laotum.k141_907409                           3794 0 -     21137 C
e Trachypithecus_hatinhensis.k141_143409                     10059 0 -     18194 C
e Trachypithecus_germaini.k141_912491                        10119 0 -     27529 C
e Trachypithecus_geei.k141_277701                            42646 0 -     60166 C
e Trachypithecus_francoisi.k141_1412647                       2527 0 -     19997 C
e Trachypithecus_cristatus.k141_580354                        6097 0 +     19930 C
e Trachypithecus_crepusculus.k141_1194022                    10192 0 +     15221 C
e Trachypithecus_auratus.k141_722599                          5996 0 -     20410 C
e Tonatia_saurophila.TonSau_scaffold_294                     79036 0 +    610378 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   1929 0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103258 0 +    114563 C
e Theropithecus_gelada.CM009954.1                        186423269 2 + 186847797 I
e Tarsius_wallacei.k141_780063                               15031 0 +     25099 C
e Tarsius_lariang.k141_2201908                               10726 0 +     70052 C
e Tapirus_terrestris.TapTer_scaffold_755                    383733 0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      115278 0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 69541 0 +    116680 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                 6890 0 +     41958 C
e Sus_scrofa.CM000828.4                                   62882534 0 -  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629              14266 0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             27280 0 +     97271 C
e Spermophilus_dauricus.KZ294078.1                         1948294 0 -   3870691 C
e Sorex_araneus.JH798187.1                                13647104 0 -  18376816 C
e Solenodon_paradoxus.SolPar_flattened_line_5840            187731 1 -    191337 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Semnopithecus_vetulus.k141_1200928                         10265 0 +     15514 C
e Semnopithecus_schistaceus.k141_1584426                      2005 0 +      7198 C
e Semnopithecus_priam.k141_638794                             1943 0 -     19483 C
e Semnopithecus_johnii.k141_670120                            2422 0 +     27826 C
e Semnopithecus_hypoleucos.k141_1615806                      21896 0 +     39453 C
e Semnopithecus_entellus.k141_11662                          14694 0 -     19888 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    151437 0 -    313613 C
e Saiga_tatarica.SaiTat_scaffold_373180                       3623 0 +      4321 C
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                84742 0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        366972 1 -   3329780 I
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4973 0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20270348 0 -  38429054 C
e Pteropus_vampyrus.KN534172.1                                1693 0 -      8028 C
e Pteropus_alecto.KB030862.1                              22973756 0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         36739 0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            11284 0 -     21811 C
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Propithecus_verreauxi.k141_956661                            485 0 -      6182 C
e Propithecus_tattersalli.k141_790011                        24240 0 -     67325 C
e Propithecus_perrieri.k141_1200571                            428 0 -     24134 C
e Propithecus_edwardsi.k141_1176054                          22245 0 +     35766 C
e Propithecus_diadema.k141_357118                              887 0 +      4256 C
e Propithecus_coronatus.k141_347390                          24726 0 +     38485 C
e Propithecus_coquerelli.NW_012148875.1                     986437 0 +   2598838 C
e Prolemur_simus.MPIZ01000396.1                            2592423 0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10073 0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           34302 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              512 0 +     22620 C
e Piliocolobus_kirkii.k141_448987                            34830 14 +     51399 I
e Piliocolobus_gordonorum.k141_381342                        33414 14 +     89929 I
e Piliocolobus_badius.k141_1234363                           38688 3 +     62158 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               8596 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     25917 7 -     29689 I
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25352 0 +     32600 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8916 0 -     78924 C
e Papio_ursinus.k141_3428135                                  4032 2 +      9205 I
e Papio_papio.k141_802527                                     3947 2 +     27711 I
e Papio_kindae.k141_1936966                                    661 2 +     41871 I
e Papio_hamadryas.Contig39                                20558723 2 +  20919399 I
e Papio_cynocephalus.k141_4307930                             1918 2 +     20448 I
e Papio_anubis.CM001495.2                                183438225 2 + 183742232 I
e Pantholops_hodgsonii.KE114653.1                          1264435 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4717037 0 -   8748460 C
e Panthera_pardus.KV860321.1                                259890 0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  147181 0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      173502 0 -    191736 C
e Ovis_aries.CM001607.2                                   17585081 0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       458791 0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7131 0 -     18566 C
e Orcinus_orca.KB316932.1                                  2781549 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144725 0 +    630418 C
e Odobenus_rosmarus.KB229312.1                              500785 0 -   2017862 C
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1355821 0 +   3988456 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744985 0 + 199412804 C
e Nycticebus_coucang.k141_5327727                             2244 0 +      8486 C
e Nycticebus_bengalensis.LG01                            102574558 0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9146037 0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    756462 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5865634 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.KL204047.1                            2025576 0 -   3037898 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186179 0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        32687 0 +     33610 C
e Myotis_lucifugus.GL429869.1                              3902127 0 -   4330536 C
e Myotis_davidii.KB100139.1                                1585919 0 -   6019432 C
e Myotis_brandtii.KE162005.1                                278362 0 -  10118263 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               297728 0 -  14710649 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              2406 0 +     14296 C
e Murina_feae.MurFea_scaffold_85699                           5192 0 +     14753 C
e Mungos_mungo.MunMun_flattened_line_23663                   31397 0 +     37127 C
e Moschus_moschiferus.MosMos_scaffold_13123                    404 0 +     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 137893 0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    26678 0 -    437263 C
e Mirza_zaza.k141_952172                                      4740 0 -     37649 C
e Mirounga_angustirostris.MirAng_flattened_line_22144        62496 0 -     63350 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33041 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849165 0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                13492 0 -     19307 C
e Microgale_talazaci.MicTal_scaffold_6613                    15448 0 -    145209 C
e Microcebus_murinus.CM007674.1                           18283386 0 -  93316391 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3173 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365              6297 0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                         6848 0 -    207569 C
e Marmota_marmota.CZRN01000018.1                          33097502 0 -  40650429 C
e Manis_pentadactyla.KN006162.1                              47065 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              15676 0 +    737560 C
e Mandrillus_sphinx.Contig270                               346616 2 +    752769 I
e Mandrillus_leucophaeus.scaffold280                      23932438 2 -  24302211 I
e Macroglossus_sobrinus.MacSob_scaffold_8222                 87595 0 +     94391 C
e Lycaon_pictus.CM007581.1                                17951776 0 -  59628241 C
e Loxodonta_africana.GL010049.1                            4214583 0 -  43346337 C
e Lophocebus_aterrimus.ctg367                              1432195 2 +   1826925 I
e Lipotes_vexillifer.KE559953.1                             267557 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3036166 0 +   3914936 C
e Lepilemur_septentrionalis.k141_185316                      22862 0 +     54090 C
e Lepilemur_ruficaudatus.k141_420445                         31720 0 -     32627 C
e Lepilemur_dorsalis.k141_577674                             24807 0 +     45836 C
e Lepilemur_ankaranensis.k141_596936                          6860 0 -     23766 C
e Lemur_catta.scaffold_24                                 15519770 0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12310 257 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                1772 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8271430 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               22505 0 +     23964 C
e Indri_indri.k141_3655594                                   18226 0 +     31101 C
e Ictidomys_tridecemlineatus.JH393364.1                    7514652 0 -   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                      80993 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19920 0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  40662 0 +     55795 C
e Hipposideros_galeritus.HipGal_scaffold_29171               39868 1 +     43066 I
e Hipposideros_armiger.JXIK01000431.1                       108427 1 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112108 0 +    128679 C
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 312 0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20659450 7 +  22651954 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17550 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               238196 0 +    327341 C
e Hapalemur_occidentalis.k141_907772                          9243 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9411 0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9307 0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7670 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2526 0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   30140 0 +     78134 C
e Glis_glis.GliGli_scaffold_19807                            30412 0 +     49224 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_56069               25525 0 +     26054 C
e Galagoides_demidoff.k141_31856                              3217 0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848567 7 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  5559 0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20192034 0 + 205367284 C
e Eulemur_sanfordi.k141_1122526                               9441 0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2273 0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9256 0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6330 0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8378 0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9635 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8378 0 +     26330 C
e Eulemur_coronatus.k141_885031                              11193 0 -     25546 C
e Eulemur_collaris.k141_377015                                2160 0 -     16928 C
e Eulemur_albifrons.k141_342033                               9462 0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             24901 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           10964 0 +    133382 C
e Erythrocebus_patas.Contig38                             21200279 0 -  21539334 C
e Erinaceus_europaeus.JH835339.1                           3325391 0 -   7059049 C
e Equus_przewalskii.KK951119.1                               29668 0 +    498745 C
e Equus_caballus.CM000403.2                               18527653 0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1279832 0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2144131 0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16325830 0 -  41312741 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089072 0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       310353 0 +    607251 C
e Eidolon_helvum.KE759718.1                                   7487 0 +     11740 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 31558 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12077 0 +     14536 C
e Dipodomys_ordii.KN672350.1                              18895859 0 +  37912305 C
e Dinomys_branickii.DinBra_scaffold_21862                    34344 1 +     67921 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    2556 0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  669484 0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8627981 0 +  20541912 C
e Delphinapterus_leucas.KZ290073.1                        16811288 0 +  35494412 C
e Daubentonia_madagascariensis.ctg71                      12532954 0 -  12879189 C
e Dasypus_novemcinctus.JH564415.1                            61143 0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1304 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 2921 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             24278 0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_603213              1136 296 +      1923 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          10566 0 -     20389 C
e Condylura_cristata.JH655891.1                           17546056 0 -  53390261 C
e Choloepus_hoffmanni.KN194906.1                            170331 0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15232 0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1248566 0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           12133 0 +     57038 C
e Cheirogaleus_major.k141_333249                             16784 0 -     52598 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            4873 0 -      6351 C
e Cercocebus_torquatus.k141_3057011                           3849 2 +     27781 I
e Cercocebus_lunulatus.k141_3846941                           3619 2 +      8260 I
e Cercocebus_chrysogaster.k141_393940                         9200 2 -     19203 I
e Cercocebus_atys.KQ010504.1                               4470651 2 +   4669795 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2666 0 -      3715 C
e Cephalopachus_bancanus.k141_2037105                         5027 0 -      8605 C
e Cavia_tschudii.CavTsc_scaffold_8919                        98672 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18359795 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18347535 0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     89317 0 +    217609 C
e Castor_canadensis.CasCan_scaffold_2074                    133707 0 +    179628 C
e Carollia_perspicillata.CarPer_scaffold_92756                2950 0 -     11696 C
e Carlito_syrichta.NW_007259797.1                           141111 0 -    496798 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18060066 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18829346 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18496837 0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17955536 0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9031272 0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    181885 0 -    185531 C
e CanFam4.chr16                                           17795828 0 -  60362399 C
e Camelus_ferus.KB017975.1                                  399713 0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2331437 0 -   7040546 C
e Camelus_bactrianus.KN276810.1                            9998973 0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2818524 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18083035 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1124957 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20272397 0 +  48749331 C
e Bison_bison.KN261452.1                                    199192 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    26150 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2118 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15191652 0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              49991 0 +     85213 C
e Avahi_laniger.k141_765380                                  49366 0 -     92717 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  2532 0 +     43469 C
e Arctocebus_calabarensis.k141_288239                        14504 0 +     17124 C
e Aplodontia_rufa.AprRuf_scaffold_68852                       7335 0 +     20879 C
e Antilocapra_americana.AntAmePen_scaffold_12469             97683 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183176 0 +    412891 C
e Ammotragus_lervia.NIVO01071767.1                          675228 0 -   2318259 C
e Allenopithecus_nigroviridis.k141_3361533                    9691 0 -     52922 C
e Allactaga_bullata.AllBul_scaffold_9566                     65041 0 -     89534 C
e Ailurus_fulgens.LNAC01001112.1                             75271 0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9507047 0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           823334 0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       1694 2 +     62944 a-a
s Allenopithecus_nigroviridis.k141_3361533                    9691 2 -     52922 a-a
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9623 2 -     28001 a-a
i Allochrocebus_lhoesti.k141_4309873                     I 2 C 0
s Allochrocebus_preussi.k141_310680                           9749 2 -      9772 a-a
i Allochrocebus_preussi.k141_310680                      I 2 N 0
s Allochrocebus_solatus.k141_166128                            906 2 -     12518 a-a
i Allochrocebus_solatus.k141_166128                      I 2 C 0
s Cercocebus_atys.KQ010504.1                               4470653 2 +   4669795 a-a
i Cercocebus_atys.KQ010504.1                             I 2 I 1
s Cercocebus_chrysogaster.k141_393940                         9202 2 -     19203 a-a
i Cercocebus_chrysogaster.k141_393940                    I 2 I 1
s Cercocebus_lunulatus.k141_3846941                           3621 2 +      8260 a-a
i Cercocebus_lunulatus.k141_3846941                      I 2 I 1
s Cercocebus_torquatus.k141_3057011                           3851 2 +     27781 a-a
i Cercocebus_torquatus.k141_3057011                      I 2 I 1
s Cercopithecus_diana.k141_2427854                            1425 2 +      9989 a-a
i Cercopithecus_diana.k141_2427854                       I 2 C 0
s Cercopithecus_hamlyni.k141_187466                           9675 2 -     27936 a-a
i Cercopithecus_hamlyni.k141_187466                      I 2 C 0
s Cercopithecus_roloway.k141_3180641                         40166 2 -     41420 a-a
i Cercopithecus_roloway.k141_3180641                     I 2 C 0
s Chlorocebus_aethiops.ctg25                              18423633 2 -  18827391 a-a
i Chlorocebus_aethiops.ctg25                             I 2 C 0
s Chlorocebus_pygerythrus.k141_1025673                       10076 2 -     50209 a-a
i Chlorocebus_pygerythrus.k141_1025673                   I 2 C 0
s Chlorocebus_sabaeus.CM001947.1                         135417080 2 + 135778131 a-a
i Chlorocebus_sabaeus.CM001947.1                         I 2 C 0
s Colobus_angolensis.KN981557.1                            1905598 2 +   2368649 a-a
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199945262 2 + 200372422 a-a
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              32133 2 +     84244 a-a
i Colobus_polykomos.k141_906115                          C 0 C 0
s Gorilla_beringei.k141_3596273                              10928 2 -     32273 a-a
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186333077 2 + 186649187 a-a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hoolock_leuconedys.ctg274                                    429820 2 +    630532 a-a
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_307679                               12749 2 -     15490 a-a
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              54756 2 +     67168 a-a
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189538406 2 - 191637585 a-a
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3331299 2 -  11177569 a-a
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1432197 2 +   1826925 a-a
i Lophocebus_aterrimus.ctg367                            I 2 I 1
s Macaca_arctoides.k141_2326796                               2018 2 +     40492 a-a
i Macaca_arctoides.k141_2326796                          I 2 I 1
s Macaca_assamensis.Contig5                               59671273 2 +  60120075 G-A
i Macaca_assamensis.Contig5                              I 2 I 1
s Macaca_cyclopis.k119_18836                                  7773 2 -     26193 a-a
i Macaca_cyclopis.k119_18836                             I 2 I 1
s Macaca_fascicularis.k141_814140                            75570 2 -    114318 a-a
i Macaca_fascicularis.k141_814140                        I 2 I 1
s Macaca_fuscata.k119_255327                                  1286 1 -     23192 --a
i Macaca_fuscata.k119_255327                             I 2 I 1
s Macaca_leonina.k141_3550399                                10739 2 -     29190 a-T
i Macaca_leonina.k141_3550399                            I 2 C 0
s Macaca_maura.k141_2733130                                  19306 2 +     37952 a-a
i Macaca_maura.k141_2733130                              I 2 C 0
s Macaca_mulatta.NC_041758.1                             186834393 2 + 187317192 a-a
i Macaca_mulatta.NC_041758.1                             I 2 I 1
s Macaca_nemestrina.KQ007038.1                            25452955 3 -  25927173 aaa
i Macaca_nemestrina.KQ007038.1                           I 2 I 1
s Macaca_nigra.k141_1655396                                  75155 2 +     89720 a-a
i Macaca_nigra.k141_1655396                              I 2 C 0
s Macaca_radiata.k141_3680011                                 2152 2 +     20474 a-a
i Macaca_radiata.k141_3680011                            I 2 I 1
s Macaca_siberu.k141_635500                                   1953 2 -     14993 a-a
i Macaca_siberu.k141_635500                              I 2 I 1
s Macaca_silenus.Contig273                                  324826 2 -    668171 a-a
i Macaca_silenus.Contig273                               I 2 C 0
s Macaca_thibetana.k99_256239                                  256 2 -     24072 G-A
i Macaca_thibetana.k99_256239                            I 2 I 1
s Macaca_tonkeana.k141_1498238                               20893 2 -     45290 a-a
i Macaca_tonkeana.k141_1498238                           I 2 C 0
s Mandrillus_leucophaeus.scaffold280                      23932440 3 -  24302211 aga
i Mandrillus_leucophaeus.scaffold280                     I 2 I 1
s Mandrillus_sphinx.Contig270                               346618 2 +    752769 a-a
i Mandrillus_sphinx.Contig270                            I 2 I 1
s Miopithecus_ogouensis.k141_534055                           4189 2 -     28506 a-a
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Nasalis_larvatus.k141_413338                               10189 2 +     21681 a-a
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Pan_paniscus.KQ411613.1                                    39048 2 +     80009 a-c
i Pan_paniscus.KQ411613.1                                C 0 I 1
s Pan_troglodytes.NBAG03001836.1                             24962 2 +     51860 a-a
i Pan_troglodytes.NBAG03001836.1                         I 577 C 0
s Papio_anubis.CM001495.2                                183438227 2 + 183742232 a-a
i Papio_anubis.CM001495.2                                I 2 I 1
s Papio_cynocephalus.k141_4307930                             1920 2 +     20448 a-a
i Papio_cynocephalus.k141_4307930                        I 2 I 1
s Papio_hamadryas.Contig39                                20558725 2 +  20919399 a-a
i Papio_hamadryas.Contig39                               I 2 I 1
s Papio_kindae.k141_1936966                                    663 2 +     41871 a-a
i Papio_kindae.k141_1936966                              I 2 I 1
s Papio_papio.k141_802527                                     3949 2 +     27711 a-a
i Papio_papio.k141_802527                                I 2 I 1
s Papio_ursinus.k141_3428135                                  4034 2 +      9205 a-a
i Papio_ursinus.k141_3428135                             I 2 I 1
s Piliocolobus_tephrosceles.PDMG02000141.1                14291062 2 -  14605196 a-a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189126122 2 + 189387572 a-a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9565728 2 +   9816681 a-a
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68350 2 -     81375 a-a
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                               171 2 +     19060 a-a
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Pygathrix_cinerea.k141_1153803                             10182 2 -     91421 a-a
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7604311 2 +   7812017 a-a
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10151 2 -     72585 a-a
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             1866 2 -     11128 a-a
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91231221 2 - 195417433 a-a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7666870 2 +   7961872 a-a
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Semnopithecus_entellus.k141_11662                          14694 2 -     19888 a-a
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21896 2 +     39453 a-a
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2422 2 +     27826 a-a
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1943 2 -     19483 a-a
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      2005 2 +      7198 a-a
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         10265 2 +     15514 a-a
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1088450 2 -   1523678 a-a
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Theropithecus_gelada.CM009954.1                        186423271 2 + 186847797 a-a
i Theropithecus_gelada.CM009954.1                        I 2 I 1
s Trachypithecus_auratus.k141_722599                          5996 2 -     20410 a-a
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    10192 2 +     15221 a-a
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        6097 2 +     19930 a-a
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2527 2 -     19997 a-a
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42646 2 -     60166 g-a
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        10119 2 -     27529 a-a
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     10059 2 -     18194 a-a
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3794 2 -     21137 a-a
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2497 2 -     10723 a-a
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1649 2 +      9834 a-a
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19967 2 +     32220 a-a
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5934064 2 +   6242583 a-a
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        3309 2 +     20839 a-a
i Trachypithecus_pileatus.k141_2007326                   C 0 I 2
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9704 0 -     10935 C
e Loris_tardigradus.ctg83                                   999590 0 +   6120653 C
e Loris_lydekkerianus.k141_2539221                             754 0 +     11245 C
e Perodicticus_potto.k141_1092580                             3108 0 +     25941 C
e Perodicticus_ibeanus.k141_855320                            4740 0 +     13100 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            11488 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      10062 0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_63728          1907 0 +      2932 C
e Xerus_inauris.XerIna_scaffold_48378                        19790 0 -     24430 C
e Vulpes_lagopus.VulLag_flattened_line_30954                  7452 0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5368464 0 -   5488506 C
e Varecia_variegata.k141_1128296                              7164 0 +     24756 C
e Varecia_rubra.k141_590885                                   7116 0 +     50397 C
e Ursus_maritimus.KK499267.1                               4846982 0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   51598 0 -     77625 C
e Tursiops_truncatus.MRVK01000835.1                       15737796 0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     3279 0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2149688 0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                    741 0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79036 0 +    610378 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   1929 0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103258 0 +    114563 C
e Tarsius_wallacei.k141_780063                               15031 0 +     25099 C
e Tarsius_lariang.k141_2201908                               10726 0 +     70052 C
e Tapirus_terrestris.TapTer_scaffold_755                    383733 0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      115278 0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 69541 0 +    116680 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                 6890 0 +     41958 C
e Sus_scrofa.CM000828.4                                   62882534 0 -  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629              14266 0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             27280 0 +     97271 C
e Spermophilus_dauricus.KZ294078.1                         1948294 0 -   3870691 C
e Sorex_araneus.JH798187.1                                13647104 0 -  18376816 C
e Solenodon_paradoxus.SolPar_flattened_line_5840            187731 1 -    191337 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    151437 0 -    313613 C
e Saiga_tatarica.SaiTat_scaffold_373180                       3623 0 +      4321 C
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                84742 0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        366972 1 -   3329780 I
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4973 0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20270348 0 -  38429054 C
e Pteropus_vampyrus.KN534172.1                                1693 0 -      8028 C
e Pteropus_alecto.KB030862.1                              22973756 0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         36739 0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            11284 0 -     21811 C
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Propithecus_verreauxi.k141_956661                            485 0 -      6182 C
e Propithecus_tattersalli.k141_790011                        24240 0 -     67325 C
e Propithecus_perrieri.k141_1200571                            428 0 -     24134 C
e Propithecus_edwardsi.k141_1176054                          22245 0 +     35766 C
e Propithecus_diadema.k141_357118                              887 0 +      4256 C
e Propithecus_coronatus.k141_347390                          24726 0 +     38485 C
e Propithecus_coquerelli.NW_012148875.1                     986437 0 +   2598838 C
e Prolemur_simus.MPIZ01000396.1                            2592423 0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10073 0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           34302 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              512 0 +     22620 C
e Piliocolobus_kirkii.k141_448987                            34830 14 +     51399 I
e Piliocolobus_gordonorum.k141_381342                        33414 14 +     89929 I
e Piliocolobus_badius.k141_1234363                           38688 3 +     62158 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               8596 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     25917 7 -     29689 I
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25352 0 +     32600 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8916 0 -     78924 C
e Pantholops_hodgsonii.KE114653.1                          1264435 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4717037 0 -   8748460 C
e Panthera_pardus.KV860321.1                                259890 0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  147181 0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      173502 0 -    191736 C
e Ovis_aries.CM001607.2                                   17585081 0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       458791 0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7131 0 -     18566 C
e Orcinus_orca.KB316932.1                                  2781549 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144725 0 +    630418 C
e Odobenus_rosmarus.KB229312.1                              500785 0 -   2017862 C
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1355821 0 +   3988456 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744985 0 + 199412804 C
e Nycticebus_coucang.k141_5327727                             2244 0 +      8486 C
e Nycticebus_bengalensis.LG01                            102574558 0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9146037 0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    756462 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5865634 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.KL204047.1                            2025576 0 -   3037898 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186179 0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        32687 0 +     33610 C
e Myotis_lucifugus.GL429869.1                              3902127 0 -   4330536 C
e Myotis_davidii.KB100139.1                                1585919 0 -   6019432 C
e Myotis_brandtii.KE162005.1                                278362 0 -  10118263 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               297728 0 -  14710649 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              2406 0 +     14296 C
e Murina_feae.MurFea_scaffold_85699                           5192 0 +     14753 C
e Mungos_mungo.MunMun_flattened_line_23663                   31397 0 +     37127 C
e Moschus_moschiferus.MosMos_scaffold_13123                    404 0 +     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 137893 0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    26678 0 -    437263 C
e Mirza_zaza.k141_952172                                      4740 0 -     37649 C
e Mirounga_angustirostris.MirAng_flattened_line_22144        62496 0 -     63350 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33041 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849165 0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                13492 0 -     19307 C
e Microgale_talazaci.MicTal_scaffold_6613                    15448 0 -    145209 C
e Microcebus_murinus.CM007674.1                           18283386 0 -  93316391 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3173 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365              6297 0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                         6848 0 -    207569 C
e Marmota_marmota.CZRN01000018.1                          33097502 0 -  40650429 C
e Manis_pentadactyla.KN006162.1                              47065 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              15676 0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 87595 0 +     94391 C
e Lycaon_pictus.CM007581.1                                17951776 0 -  59628241 C
e Loxodonta_africana.GL010049.1                            4214583 0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             267557 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3036166 0 +   3914936 C
e Lepilemur_septentrionalis.k141_185316                      22862 0 +     54090 C
e Lepilemur_ruficaudatus.k141_420445                         31720 0 -     32627 C
e Lepilemur_dorsalis.k141_577674                             24807 0 +     45836 C
e Lepilemur_ankaranensis.k141_596936                          6860 0 -     23766 C
e Lemur_catta.scaffold_24                                 15519770 0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12310 257 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                1772 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8271430 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               22505 0 +     23964 C
e Indri_indri.k141_3655594                                   18226 0 +     31101 C
e Ictidomys_tridecemlineatus.JH393364.1                    7514652 0 -   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                      80993 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19920 0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  40662 0 +     55795 C
e Hipposideros_galeritus.HipGal_scaffold_29171               39868 1 +     43066 I
e Hipposideros_armiger.JXIK01000431.1                       108427 1 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112108 0 +    128679 C
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 312 0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20659450 7 +  22651954 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17550 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               238196 0 +    327341 C
e Hapalemur_occidentalis.k141_907772                          9243 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                          9411 0 -     41752 C
e Hapalemur_griseus.k141_1511508                              9307 0 +     18253 C
e Hapalemur_gilberti.k141_488810                              7670 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           2526 0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   30140 0 +     78134 C
e Glis_glis.GliGli_scaffold_19807                            30412 0 +     49224 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_56069               25525 0 +     26054 C
e Galagoides_demidoff.k141_31856                              3217 0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848567 7 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  5559 0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20192034 0 + 205367284 C
e Eulemur_sanfordi.k141_1122526                               9441 0 +    111500 C
e Eulemur_rufus.k141_2367191                                  2273 0 +      2552 C
e Eulemur_rubriventer.k141_571033                             9256 0 +     26496 C
e Eulemur_mongoz.k141_232305                                  6330 0 +     97555 C
e Eulemur_macaco.k141_1562045                                 8378 0 +     75513 C
e Eulemur_fulvus.k141_544389                                  9635 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             8378 0 +     26330 C
e Eulemur_coronatus.k141_885031                              11193 0 -     25546 C
e Eulemur_collaris.k141_377015                                2160 0 -     16928 C
e Eulemur_albifrons.k141_342033                               9462 0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             24901 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           10964 0 +    133382 C
e Erythrocebus_patas.Contig38                             21200279 0 -  21539334 C
e Erinaceus_europaeus.JH835339.1                           3325391 0 -   7059049 C
e Equus_przewalskii.KK951119.1                               29668 0 +    498745 C
e Equus_caballus.CM000403.2                               18527653 0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1279832 0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2144131 0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16325830 0 -  41312741 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089072 0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       310353 0 +    607251 C
e Eidolon_helvum.KE759718.1                                   7487 0 +     11740 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 31558 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12077 0 +     14536 C
e Dipodomys_ordii.KN672350.1                              18895859 0 +  37912305 C
e Dinomys_branickii.DinBra_scaffold_21862                    34344 1 +     67921 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    2556 0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  669484 0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8627981 0 +  20541912 C
e Delphinapterus_leucas.KZ290073.1                        16811288 0 +  35494412 C
e Daubentonia_madagascariensis.ctg71                      12532954 0 -  12879189 C
e Dasypus_novemcinctus.JH564415.1                            61143 0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1304 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 2921 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             24278 0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_603213              1136 296 +      1923 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          10566 0 -     20389 C
e Condylura_cristata.JH655891.1                           17546056 0 -  53390261 C
e Choloepus_hoffmanni.KN194906.1                            170331 0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15232 0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1248566 0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           12133 0 +     57038 C
e Cheirogaleus_major.k141_333249                             16784 0 -     52598 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            4873 0 -      6351 C
e Cercopithecus_pogonias.k141_822820                          9672 3 +     17596 I
e Cercopithecus_petaurista.k141_807961                        9696 3 -     27947 I
e Cercopithecus_nictitans.k141_3278028                        2177 3 +      7159 I
e Cercopithecus_neglectus.k141_2526306                       34889 3 -     53127 I
e Cercopithecus_mona.ctg39                                21217774 3 -  21565898 I
e Cercopithecus_albogularis.ctg5                                38812075 3 +  39242232 I
e Cercopithecus_lowei.k141_457449                             9703 3 -     11289 I
e Cercopithecus_cephus.k141_1078548                           6993 3 +     29689 I
e Cercopithecus_ascanius.k141_1024104                         4008 3 -     20310 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2666 0 -      3715 C
e Cephalopachus_bancanus.k141_2037105                         5027 0 -      8605 C
e Cavia_tschudii.CavTsc_scaffold_8919                        98672 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18359795 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18347535 0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     89317 0 +    217609 C
e Castor_canadensis.CasCan_scaffold_2074                    133707 0 +    179628 C
e Carollia_perspicillata.CarPer_scaffold_92756                2950 0 -     11696 C
e Carlito_syrichta.NW_007259797.1                           141111 0 -    496798 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18060066 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18829346 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18496837 0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17955536 0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9031272 0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    181885 0 -    185531 C
e CanFam4.chr16                                           17795828 0 -  60362399 C
e Camelus_ferus.KB017975.1                                  399713 0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2331437 0 -   7040546 C
e Camelus_bactrianus.KN276810.1                            9998973 0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2818524 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18083035 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1124957 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20272397 0 +  48749331 C
e Bison_bison.KN261452.1                                    199192 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    26150 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2118 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15191652 0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              49991 0 +     85213 C
e Avahi_laniger.k141_765380                                  49366 0 -     92717 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  2532 0 +     43469 C
e Arctocebus_calabarensis.k141_288239                        14504 0 +     17124 C
e Aplodontia_rufa.AprRuf_scaffold_68852                       7335 0 +     20879 C
e Antilocapra_americana.AntAmePen_scaffold_12469             97683 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183176 0 +    412891 C
e Ammotragus_lervia.NIVO01071767.1                          675228 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     65041 0 -     89534 C
e Ailurus_fulgens.LNAC01001112.1                             75271 0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9507047 0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           823334 0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       1696 12 +     62944 a-t--------------g------------tt---tat-g-----tt-g
s Acinonyx_jubatus.LLWD01001279.1                           823334 14 -   1699592 A-A-------------TG------------GT---TGC-A-----TTGA
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 11
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507047 14 -  29979442 a-a-------------tg------------gt---tGT-G-----TTGA
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 11
s Ailurus_fulgens.LNAC01001112.1                             75271 14 -    347723 a-a-------------tg------------gC---TGT-G-----TTGA
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 11
s Allactaga_bullata.AllBul_scaffold_9566                     65041  9 -     89534 -------------------------------A---AATTA-----TT-A
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9693 13 -     52922 a-aa-------------G------------TT---TAT-G-----TT-G
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9625 14 -     28001 a-aaa------------G------------TT---TAT-G-----TT-G
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                            71 14 -     18505 A-A------------AAG------------TT---TAT-G-----TT-G
i Allochrocebus_preussi.k141_1442296                     N 0 C 0
s Allochrocebus_solatus.k141_166128                            908 26 -     12518 a-aaa------------aaaaaaaaaaaaTTT---TAT-G-----TT-G
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675228 14 -   2318259 A-A-------------TA------------GT---TAC-C-----TTAA
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 9
s Anoura_caudifer.AnoCau_scaffold_1412                      183176 13 +    412891 A-A-------------TA------------GT---TAT-G-----CT-G
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 12
s Antilocapra_americana.AntAmePen_scaffold_12469             97683 14 -    100397 A-A-------------TA------------GT---TAC-C-----TTAA
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 I 9
s Aplodontia_rufa.AprRuf_scaffold_68852                       7335 13 +     20879 A-A-------------TG------------GT---AAT-A-----GT-A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14504 13 +     17124 A-A-------------TG------------AT---TAT-G-----CT-A
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2532 13 +     43469 A-A-------------TA------------GT---TAT-G-----TG-G
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 12
s Avahi_laniger.k141_765380                                  49366 13 -     92717 A-A-------------TG------------GT---TAT-G-----TT-A
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              49991 13 +     85213 A-A-------------TG------------GT---TAT-G-----TT-A
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191652 14 +  23207421 a-a-------------ta------------at---tat-g-----ctag
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 9
s Balaenoptera_bonaerensis.DF707048.1                         2118 14 -     18090 a-a-------------ta------------at---tat-g-----ctag
i Balaenoptera_bonaerensis.DF707048.1                    C 0 I 9
s Beatragus_hunteri.BeaHun_scaffold_50177                    26150 14 +     34529 A-A-------------TA------------GT---TAC-C-----TTAA
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 9
s Bison_bison.KN261452.1                                    199192 14 -    288883 A-A-------------TA------------GT---TAC-C-----TTAA
i Bison_bison.KN261452.1                                 C 0 I 9
s Bos_indicus.CM003047.1                                  20272397 14 +  48749331 A-A-------------TA------------GT---TAC-C-----TTAA
i Bos_indicus.CM003047.1                                 C 0 I 9
s Bos_mutus.JH880303.1                                     1124957 12 -   1948126 A-A-------------TA------------GT---TAC-C-----TT--
i Bos_mutus.JH880303.1                                   C 0 I 7
s Bos_taurus.CM000203.6                                   18083035 14 +  45695690 A-A-------------TA------------GT---TAC-C-----TTAA
i Bos_taurus.CM000203.6                                  C 0 I 9
s Bubalus_bubalis.KI419123.1                               2818524 14 +   4408762 A-A-------------TA------------GT---TAC-T-----TTAA
i Bubalus_bubalis.KI419123.1                             C 0 I 9
s Camelus_bactrianus.KN276810.1                            9998973 14 -  17673402 A-A-------------TG------------GT---TAT-G-----CTGA
i Camelus_bactrianus.KN276810.1                          C 0 I 9
s Camelus_dromedarius.KN272107.1                           2331437 14 -   7040546 A-A-------------TG------------GT---TAT-G-----CTGA
i Camelus_dromedarius.KN272107.1                         C 0 I 9
s Camelus_ferus.KB017975.1                                  399713 14 -   1652518 A-A-------------TG------------GT---TAT-G-----CTGA
i Camelus_ferus.KB017975.1                               C 0 I 9
s CanFam4.chr16                                           17795828 14 -  60362399 A-G-------------TG------------GT---TGT-G-----TTCA
i CanFam4.chr16                                          C 0 I 11
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181885 14 -    185531 A-G-------------TG------------GT---TGT-G-----TTCA
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 I 11
s Canis_lupus_dingo.QKWQ01000480.1                         9031272 14 -   9314153 A-G-------------TG------------GT---TGT-G-----TTCA
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 11
s Canis_lupus_familiaris.chr16                            17955536 14 -  59632846 A-G-------------TG------------GT---TGT-G-----TTCA
i Canis_lupus_familiaris.chr16                           C 0 I 11
s Canis_lupus_orion.HG994398.1                            18496837 14 +  63665305 A-G-------------TG------------GT---TGT-G-----TTCA
i Canis_lupus_orion.HG994398.1                           C 0 I 11
s Capra_aegagrus.CM003241.1                               18829346 14 +  46296322 A-A-------------TG------------GT---TAC-C-----TTAA
i Capra_aegagrus.CM003241.1                              C 0 I 9
s Capra_hircus.CM004588.1                                 18060066 14 -  44709034 A-A-------------TG------------GT---TAC-C-----TTAA
i Capra_hircus.CM004588.1                                C 0 I 9
s Carlito_syrichta.NW_007259797.1                           141111 12 -    496798 T-A-------------TA------------GT---C-T-T-----TT-A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2950 13 -     11696 A-A-------------TA------------GT---TAT-G-----CT-G
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 12
s Castor_canadensis.CasCan_scaffold_2074                    133707 14 +    179628 A-A-------------TA------------GA---AAT-G--A--TT-A
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89317 14 +    217609 A-A-------------TG------------GT---TAT-G-----CTGA
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 9
s Cavia_aperea.AVPZ01000300.1                             18347535  6 -  23392119 A-A-------------TG------------GT-----------------
i Cavia_aperea.AVPZ01000300.1                            C 0 I 5
s Cavia_porcellus.DS562891.1                              18359795  6 -  23407841 A-A-------------TG------------GT-----------------
i Cavia_porcellus.DS562891.1                             C 0 I 5
s Cavia_tschudii.CavTsc_scaffold_8919                        98672  6 +    143979 A-A-------------TG------------GT-----------------
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 I 5
s Cephalopachus_bancanus.k141_2037105                         5027 12 -      8605 T-A-------------TA------------GT---C-T-T-----TT-A
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227948 13 +  27778364 A-A-------------TA------------GT---TAT-G-----TT-A
i Ceratotherium_simum.JH767749.1                         C 0 I 12
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2666 13 -      3715 A-A-------------TA------------GT---TAT-G-----TT-A
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 I 12
s Cercocebus_atys.KQ010504.1                               4470656 10 +   4669795 -----------------g------------tt---tat-g-----tt-g
i Cercocebus_atys.KQ010504.1                             I 1 C 0
s Cercocebus_chrysogaster.k141_393940                         9205 10 -     19203 -----------------G------------TT---TAT-G-----TT-G
i Cercocebus_chrysogaster.k141_393940                    I 1 C 0
s Cercocebus_lunulatus.k141_3846941                           3624 10 +      8260 -----------------G------------TT---TAT-G-----TT-G
i Cercocebus_lunulatus.k141_3846941                      I 1 C 0
s Cercocebus_torquatus.k141_3057011                           3854 10 +     27781 -----------------G------------TT---TAT-G-----TT-G
i Cercocebus_torquatus.k141_3057011                      I 1 C 0
s Cercopithecus_ascanius.k141_1024104                         4011 10 -     20310 -----------------G------------TT---TAT-G-----TT-G
i Cercopithecus_ascanius.k141_1024104                    I 3 C 0
s Cercopithecus_cephus.k141_1078548                           6996 10 +     29689 -----------------G------------TT---TAT-G-----TT-G
i Cercopithecus_cephus.k141_1078548                      I 3 C 0
s Cercopithecus_diana.k141_2427854                            1427 17 +      9989 a-aaaaaa---------G------------TT---TAT-G-----TT-G
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9677 13 -     27936 a-aa-------------G------------GT---TAT-G-----TT-G
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9706 10 -     11289 -----------------G------------TT---TGT-G-----TT-G
i Cercopithecus_lowei.k141_457449                        I 3 C 0
s Cercopithecus_albogularis.ctg5                                38812078 10 +  39242232 -----------------G------------TT---TAT-G-----TT-G
i Cercopithecus_albogularis.ctg5                               I 3 C 0
s Cercopithecus_mona.ctg39                                21217777 10 -  21565898 -----------------G------------TT---TAT-G-----TT-G
i Cercopithecus_mona.ctg39                               I 3 C 0
s Cercopithecus_neglectus.k141_2526306                       34892 10 -     53127 -----------------G------------TT---TAT-G-----TT-G
i Cercopithecus_neglectus.k141_2526306                   I 3 C 0
s Cercopithecus_nictitans.k141_3278028                        2180 10 +      7159 -----------------G------------TT---TAT-G-----TT-G
i Cercopithecus_nictitans.k141_3278028                   I 3 C 0
s Cercopithecus_petaurista.k141_807961                        9699 10 -     27947 -----------------G------------TT---TAT-G-----TT-G
i Cercopithecus_petaurista.k141_807961                   I 3 C 0
s Cercopithecus_pogonias.k141_822820                          9675 10 +     17596 -----------------G------------TT---TAT-G-----TT-G
i Cercopithecus_pogonias.k141_822820                     I 3 C 0
s Cercopithecus_roloway.k141_3180641                         40168 17 -     41420 a-aaaaaa---------G------------TT---TAT-G-----TT-G
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4873 13 -      6351 A-A-------------CG------------GG---CAT-A-----TT-G
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16784 13 -     52598 A-A-------------TG------------GT---TAT-G-----CT-A
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12133 13 +     57038 A-A-------------TG------------GT---TAT-G-----CT-A
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1248566  6 +   2543920 A-G-------------TG------------GT-----------------
i Chinchilla_lanigera.JH722012.1                         C 0 I 5
s Chlorocebus_aethiops.ctg25                              18423635 13 -  18827391 a-aa-------------G------------TT---TAT-G-----TT-G
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       10078 13 -     50209 a-aa-------------G------------TT---TAT-G-----TT-G
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135417082 15 + 135778131 a-aaaa-----------g------------tt---tat-g-----tt-g
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15232 13 +     19366 A-A-------------TA------------GG---CAT-A-----TT-G
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170331 13 +    839153 A-A-------------TA------------GG---CAT-A-----TT-G
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_172426               9704 14 -     10935 AGA-------------TG------------GA---CAT-G-----GT-G
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          C 0 C 0
s Colobus_angolensis.KN981557.1                            1905600 23 +   2368649 a-aaaaaaaaaaaa---g------------tc---tat-g-----tt-g
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199945264 23 + 200372422 a-aagaaaaaaaa---TG------------TC---TAT-G-----TT-G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              32135 23 +     84244 a-aaaaaaaaaaaa---G------------TC---TAT-G-----TT-G
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17546056 15 -  53390261 AAA-------------TG------------GT---TAT-G-----TTGA
i Condylura_cristata.JH655891.1                          C 0 I 9
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10566 13 -     20389 A-A-------------TG------------GC---TTT-G-----TT-A
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 13
s Crocidura_indochinensis.CroInd_scaffold_109268              7620 14 +      9948 A-A-------------TG-----------CTT---TTT-A-----TT-A
i Crocidura_indochinensis.CroInd_scaffold_109268         I 11 I 12
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24278  4 -     87169 A-A-------------TG-------------------------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 17
s Cuniculus_paca.CunPac_flattened_line_231100                 2921  6 +      5455 A-A-------------TG------------GT-----------------
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 I 5
s Dasyprocta_punctata.DasPun_flattened_line_206793            1304  6 +      3576 A-A-------------AG------------GT-----------------
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 I 5
s Dasypus_novemcinctus.JH564415.1                            61143 13 +   2246927 A-A-------------TG------------GG---AAT-A-----CT-G
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12532954 13 -  12879189 A-A-------------TG------------GT---TAT-G-----TT-A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811288 14 +  35494412 A-A-------------TA------------GT---TAT-G-----CTAC
i Delphinapterus_leucas.KZ290073.1                       C 0 I 9
s Desmodus_rotundus.KZ672289.1                             8627981 13 +  20541912 a-a-------------ca------------tt---tat-g-----cT-G
i Desmodus_rotundus.KZ672289.1                           C 0 I 12
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669484 13 +   1390856 A-A-------------TA------------GT---TAT-G-----TT-G
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 12
s Diceros_bicornis.DicBicMic_scaffold_5955                    2556 13 +    198055 A-A-------------TA------------GT---TAT-G-----TT-G
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 12
s Dinomys_branickii.DinBra_scaffold_21862                    34345  6 +     67921 A-A-------------TG------------GT-----------------
i Dinomys_branickii.DinBra_scaffold_21862                I 1 I 5
s Dipodomys_ordii.KN672350.1                              18895859 15 +  37912305 a-a-------------ta------------aa---aaata----att-a
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  12077 15 +     14536 A-A-------------TA------------AA---AAATA--A--TT-A
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31558  6 -     42551 A-A-------------TG------------TT-----------------
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 I 5
s Eidolon_helvum.KE759718.1                                   7487 13 +     11740 A-A-------------TG------------GT---TAT-G-----TT-G
i Eidolon_helvum.KE759718.1                              C 0 I 9
s Elaphurus_davidianus.JRFZ01104969.1                       310353 14 +    607251 A-A-------------TA------------GT---TAC-C-----TTAA
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 9
s Elephantulus_edwardii.JH947257.1                         1089072 14 +  10337057 ACA-------------TA------------GG---CAC-a-----ta-g
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16325830 14 -  41312741 a-a-------------tg------------gt---TGT-G-----TTGA
i Enhydra_lutris.KZ291758.1                              C 0 I 11
s Eptesicus_fuscus.JH977646.1                              2144131 13 -  14770903 A-A-------------TG------------GT---TAT-G-----TT-G
i Eptesicus_fuscus.JH977646.1                            C 0 I 12
s Equus_asinus.JREZ01000139.1                              1279832 13 +   4378816 A-A-------------TA------------CT---TAT-G-----TT-G
i Equus_asinus.JREZ01000139.1                            C 0 I 12
s Equus_caballus.CM000403.2                               18527653 13 -  39960074 A-A-------------TA------------CT---TAT-G-----TT-G
i Equus_caballus.CM000403.2                              C 0 I 12
s Equus_przewalskii.KK951119.1                               29668 13 +    498745 A-A-------------TA------------CT---TAT-G-----TT-G
i Equus_przewalskii.KK951119.1                           C 0 I 12
s Erinaceus_europaeus.JH835339.1                           3325391  1 -   7059049 ------------------------------------------------A
i Erinaceus_europaeus.JH835339.1                         C 0 I 8
s Eschrichtius_robustus.EscRob_flattened_line_8968           10964 14 +    133382 A-A-------------TA------------GT---TAT-G-----CTAG
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 9
s Eubalaena_japonica.EubJap_flattened_line_31514             24901 14 -     44125 A-A-------------TA------------GT---TAT-G-----CTAG
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 I 9
s Eulemur_albifrons.k141_342033                               9462 13 -     14127 A-A-------------TG------------GT---TAT-G-----TT-A
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                2160 13 -     16928 A-A-------------TG------------GT---TAT-G-----TT-A
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              11193 13 -     25546 A-A-------------TG------------GT---TAT-G-----TT-A
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             8378 13 +     26330 A-A-------------TG------------GT---TAT-G-----TT-A
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                  9635 13 +     23973 A-A-------------TG------------GT---TAT-G-----TT-A
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 8378 13 +     75513 A-A-------------TG------------GT---TAT-G-----TT-A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  6330 13 +     97555 A-A-------------TG------------GT---TAT-G-----TT-A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                             9256 13 +     26496 A-A-------------TG------------GT---TAT-G-----TT-A
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_2367191                                  2273 13 +      2552 A-A-------------TG------------GT---TAT-G-----TT-A
i Eulemur_rufus.k141_2367191                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                               9441 13 +    111500 A-A-------------CG------------GT---TAT-G-----TT-A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.AANG03299807.1                                   456 14 -       507 A-A-------------TG------------GT---TGC-A-----TTGA
i Felis_catus.AANG03299807.1                             C 0 I 11
s Felis_catus_fca126.CM031415.1                           20192034 14 + 205367284 A-A-------------TG------------GT---TGC-A-----TTGA
i Felis_catus_fca126.CM031415.1                          C 0 I 11
s Felis_nigripes.FelNig_flattened_line_20823                  5559 14 -     36744 A-A-------------TG------------GT---TGC-A-----TTGA
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 11
s Fukomys_damarensis.KN121974.1                             848574  9 +   3816255 ---------------------------------------CTTATATT-A
i Fukomys_damarensis.KN121974.1                          I 7 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25525 12 +     26054 A-A--------------G------------GT---TAT-G-----TT-A
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30412 13 +     49224 A-A-------------TG------------GT---TAT-A-----TT-C
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              10930 13 -     32273 a-a-------------tg------------tt---tat-g-----tt-g
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186333079 13 + 186649187 a-a-------------tg------------tt---tat-g-----tt-g
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   30140 13 +     78134 A-A-------------TG------------GT---TAT-A-----TT-A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           2526 13 -     19426 a-a-------------TG------------GT---TAT-G-----TT-A
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              7670 13 -     15286 a-a-------------tg------------gt---tAT-G-----TT-A
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                              9307 13 +     18253 A-A-------------TA------------GT---TAT-G-----TT-A
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                          9411 13 -     41752 a-a-------------TG------------GT---TAT-G-----TT-A
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                          9243 13 -     16460 a-a-------------ta------------gt---tat-g-----tt-a
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238196 14 +    327341 A-A-------------TG------------AT---TGG-G-----TCAA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 11
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17550 14 +     36099 A-A-------------TA------------GT---TAC-C-----TTAA
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 I 9
s Heterocephalus_glaber.JH602082.1                        20659457  9 +  22651954 ---------------------------------------TTTATATT-A
i Heterocephalus_glaber.JH602082.1                       I 7 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 312 14 +       961 AGA-------------TG------------GG---CAA-A-----TT-G
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112108 14 +    128679 A-A-------------TA------------GT---TAT-G-----CTGA
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 I 9
s Hoolock_leuconedys.ctg274                                    429822 13 +    630532 a-aa-------------G------------TT---TAT-G-----TT-G
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40662 14 +     55795 A-A-------------TG------------GT---TGT-G-----CTGA
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 11
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19920  6 -    143317 A-G-------------TA------------GT-----------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 5
s Hylobates_agilis.k141_307679                               12751 15 -     15490 a-aaa-----------TG------------TT---TAT-G-----TT-G
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              54758 13 +     67168 a-a-------------TG------------TT---TAT-G-----TT-G
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189538408 13 - 191637585 a-a-------------tg------------tt---tat-g-----tt-g
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3331301 13 -  11177569 a-a-------------tg------------tt---tat-g-----tt-g
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      80993 16 +    135385 A-A-------------TG------------GCCCTTAT-A-----TT-A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514652 14 -   7955117 aaa-------------ta------------gt---aat-a-----ta-a
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   18226 13 +     31101 A-A-------------TG------------GT---TCT-G-----TT-A
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22505 14 +     23964 A-A-------------TA------------GT---TAC-G-----CTAG
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 I 9
s Jaculus_jaculus.JH725527.1                               8271430 14 -   9596543 t-a-------------tg------------aa---aatta-----tt-a
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1772 14 -      3359 A-A-------------TA------------GT---TAT-G-----CTAG
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 I 9
s Lasiurus_borealis.LasBor_scaffold_50988                    11996 13 +     29960 A-A-------------TT------------GT---TAT-G-----TT-G
i Lasiurus_borealis.LasBor_scaffold_50988                I 93 I 129
s Lemur_catta.scaffold_24                                 15519770 13 -  30322482 A-A-------------TG------------GT---TAT-G-----TT-A
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6860 13 -     23766 A-A-------------TG------------GT---TAT-G-----TT-A
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24807 13 +     45836 A-A-------------TG------------GT---TAT-G-----TT-A
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31720 13 -     32627 A-A-------------TG------------GT---TAT-G-----TT-A
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      22862 13 +     54090 A-A-------------TG------------GT---TAT-G-----TT-A
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3036166 14 +   3914936 a-a-------------tg------------gt---tGT-G-----TTGA
i Leptonychotes_weddellii.KB714746.1                     C 0 I 11
s Lipotes_vexillifer.KE559953.1                             267557 14 -    662738 A-A-------------TA------------GT---TAT-G-----CTAG
i Lipotes_vexillifer.KE559953.1                          C 0 I 9
s Lophocebus_aterrimus.ctg367                              1432200 10 +   1826925 -----------------G------------TT---TAT-G-----TT-G
i Lophocebus_aterrimus.ctg367                            I 1 C 0
s Loris_lydekkerianus.k141_2539221                             754 13 +     11245 T-A-------------TG------------AT---TAT-G-----CT-A
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999590 13 +   6120653 T-A-------------TG------------AT---TAT-G-----CT-A
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214583 14 -  43346337 AGA-------------TG------------GA---CAC-A-----TT-G
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951776 14 -  59628241 A-G-------------TG------------GT---TGT-G-----TTCA
i Lycaon_pictus.CM007581.1                               C 0 I 11
s Macaca_arctoides.k141_2326796                               2021 10 +     40492 -----------------G------------TT---TAT-G-----TT-G
i Macaca_arctoides.k141_2326796                          I 1 C 0
s Macaca_assamensis.Contig5                               59671276 10 +  60120075 -----------------G------------TT---TAT-G-----TT-G
i Macaca_assamensis.Contig5                              I 1 C 0
s Macaca_cyclopis.k119_18836                                  7776 10 -     26193 -----------------G------------TT---TAT-A-----TT-G
i Macaca_cyclopis.k119_18836                             I 1 C 0
s Macaca_fascicularis.k141_814140                            75573 10 -    114318 -----------------G------------TT---TAT-G-----TT-G
i Macaca_fascicularis.k141_814140                        I 1 C 0
s Macaca_fuscata.k119_255327                                  1288 10 -     23192 -----------------G------------TT---TAT-G-----TT-G
i Macaca_fuscata.k119_255327                             I 1 C 0
s Macaca_leonina.k141_3550399                                10741 10 -     29190 -----------------G------------CT---TAT-G-----TT-G
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  19308 10 +     37952 -----------------G------------TT---TAT-G-----TT-G
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834396 10 + 187317192 -----------------g------------tt---tat-g-----tt-g
i Macaca_mulatta.NC_041758.1                             I 1 C 0
s Macaca_nemestrina.KQ007038.1                            25452959 10 -  25927173 -----------------g------------ct---tat-g-----tt-G
i Macaca_nemestrina.KQ007038.1                           I 1 C 0
s Macaca_nigra.k141_1655396                                  75157 10 +     89720 -----------------G------------TT---TAT-G-----TT-G
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 2155 10 +     20474 -----------------G------------TT---TAT-G-----TT-G
i Macaca_radiata.k141_3680011                            I 1 C 0
s Macaca_siberu.k141_635500                                   1956 10 -     14993 -----------------G------------TT---TAT-G-----TT-G
i Macaca_siberu.k141_635500                              I 1 C 0
s Macaca_silenus.Contig273                                  324828 10 -    668171 -----------------G------------TT---TAT-G-----TT-G
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                  259 10 -     24072 -----------------G------------TT---TAT-G-----TT-G
i Macaca_thibetana.k99_256239                            I 1 C 0
s Macaca_tonkeana.k141_1498238                               20895 10 -     45290 -----------------G------------TT---TAT-G-----TT-G
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87595 13 +     94391 A-A-------------TG------------GT---TAT-G-----TT-G
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 9
s Mandrillus_leucophaeus.scaffold280                      23932444 10 -  24302211 -----------------G------------TT---TAT-G-----TT-G
i Mandrillus_leucophaeus.scaffold280                     I 1 C 0
s Mandrillus_sphinx.Contig270                               346621 10 +    752769 -----------------G------------TT---TAT-G-----TT-G
i Mandrillus_sphinx.Contig270                            I 1 C 0
s Manis_javanica.JSZB01003497.1                              15676  8 +    737560 A-A-------------CG------------GT---TG------------
i Manis_javanica.JSZB01003497.1                          C 0 I 11
s Manis_pentadactyla.KN006162.1                              47065  8 -    317179 A-A-------------CG------------GT---TA------------
i Manis_pentadactyla.KN006162.1                          C 0 I 11
s Marmota_marmota.CZRN01000018.1                          33097502 14 -  40650429 aaa-------------ta------------at---aat-a-----ta-a
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6848 13 -    207569 A-A-------------TG------------GC---TTT-G-----TT-G
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 12
s Mellivora_capensis.MelCap_flattened_line_69365              6297 14 +     13704 A-A-------------TG------------GT---TGT-G-----TTGA
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 11
s Mesoplodon_bidens.MesBid_scaffold_108144                    3173 14 +     10310 A-A-------------TA------------GT---TAT-G-----CTAG
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 I 9
s Microcebus_murinus.CM007674.1                           18283386 13 -  93316391 A-A-------------CA------------GT---TAT-G-----TT-A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    15448 14 -    145209 AGA-------------TA------------AA---CAC-C-----TT-G
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13492 13 -     19307 A-A-------------TA------------GT---TAT-G-----CT-G
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 12
s Miniopterus_natalensis.LDJU01000034.1                    1849165 13 +   8254450 A-A-------------TG------------GT---TAT-G-----TT-G
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 10
s Miniopterus_schreibersii.MinSch_scaffold_18080             33041 13 +     64694 A-A-------------TG------------GT---TAT-G-----TT-G
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 10
s Miopithecus_ogouensis.k141_534055                           4191 13 -     28506 a-aa-------------g------------tt---tat-g-----tt-g
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62496 14 -     63350 A-A-------------TG------------GT---TGT-G-----TTGA
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 I 11
s Mirza_zaza.k141_952172                                      4740 13 -     37649 A-A-------------CG------------GT---TAT-G-----TT-A
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26678 14 -    437263 A-A-------------TA------------GT---TAT-G-----CTAC
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 9
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137893 13 -    366855 A-A-------------TA------------GT---TAT-G-----CT-G
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 12
s Moschus_moschiferus.MosMos_scaffold_13123                    404 14 +     82753 A-A-------------TA------------GT---TAC-C-----TTAA
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 9
s Mungos_mungo.MunMun_flattened_line_23663                   31397 14 +     37127 A-A-------------TG------------GT---TGT-G-----TCAA
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 11
s Murina_feae.MurFea_scaffold_85699                           5192 13 +     14753 A-A-------------TG------------GT---TAT-G-----TT-G
i Murina_feae.MurFea_scaffold_85699                      C 0 I 12
s Muscardinus_avellanarius.MusAve_scaffold_82313              2406 13 +     14296 A-A-------------TG------------GT---TAT-A-----TT-A
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               297728 14 -  14710649 A-A-------------TG------------GT---TGT-G-----TTGA
i Mustela_putorius.JH418006.1                            C 0 I 11
s Myotis_brandtii.KE162005.1                                278362 13 -  10118263 A-C-------------TG------------GT---TAT-G-----TT-G
i Myotis_brandtii.KE162005.1                             C 0 I 12
s Myotis_davidii.KB100139.1                                1585919 13 -   6019432 A-A-------------TG------------GT---TAT-G-----TT-G
i Myotis_davidii.KB100139.1                              C 0 I 12
s Myotis_lucifugus.GL429869.1                              3902127 13 -   4330536 A-C-------------TG------------GT---TAT-G-----TT-G
i Myotis_lucifugus.GL429869.1                            C 0 I 12
s Myotis_myotis.MyoMyo_scaffold_28916                        32687 13 +     33610 A-A-------------TG------------GT---TAT-G-----TT-G
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 I 12
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186179 12 +    196477 A-A-------------TA------------GA---CAT-A-----T--G
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025576 11 -   3037898 a-a-------------tg------------aT---CAA-A-----T---
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               10191 13 +     21681 a-a-------------TG------------TT---TAT-A-----TT-G
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865634 14 +   7148211 A-A-------------TA------------GT---TAT-G-----CTAG
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 9
s Noctilio_leporinus.NocLep_scaffold_251                    756462 13 +    783361 A-A-------------TA------------GT---TAT-G-----CT-G
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 11
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146037 14 -   9404916 A-G-------------TG------------GT---TGT-G-----TTCA
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 11
s Nycticebus_bengalensis.LG01                            102574558 13 - 196305487 A-A-------------TG------------AT---TAT-G-----CT-A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2244 13 +      8486 A-A-------------TG------------AT---TAT-G-----CT-A
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744985 13 + 199412804 A-A-------------TG------------AT---TAT-G-----CT-A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355821 13 +   3988456 A-A-------------TA------------GT---TAC-G-----TT-A
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              500785 14 -   2017862 A-A-------------TG------------GT---TGT-G-----TTGA
i Odobenus_rosmarus.KB229312.1                           C 0 I 9
s Odocoileus_virginianus.KZ100018.1                         144725 14 +    630418 A-A-------------TA------------GT---TAC-C-----TTAA
i Odocoileus_virginianus.KZ100018.1                      C 0 I 9
s Orcinus_orca.KB316932.1                                  2781549 14 -  10937097 A-A-------------TA------------GT---TAT-G-----CTAG
i Orcinus_orca.KB316932.1                                C 0 I 9
s Orycteropus_afer.OryAfe_flattened_line_144387               7131 14 -     18566 TTA-------------CA------------AG---CAC-A-----TT-G
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458791 14 -    559221 A-G-------------TG------------GT---TGT-G-----TTCA
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 11
s Ovis_aries.CM001607.2                                   17585081 14 +  44047080 A-A-------------TA------------GT---TAC-C-----TTAA
i Ovis_aries.CM001607.2                                  C 0 I 9
s Ovis_canadensis.OviCan_scaffold_2572                      173502 14 -    191736 A-A-------------TA------------GT---TAC-C-----TTAA
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 I 9
s Pan_paniscus.KQ411613.1                                    39051 10 +     80009 -----------------g------------tt---tat-g-----tT-G
i Pan_paniscus.KQ411613.1                                I 1 C 0
s Pan_troglodytes.NBAG03001836.1                             24964 13 +     51860 a-a-------------tg------------tt---tat-g-----tt-g
i Pan_troglodytes.NBAG03001836.1                         C 0 I 6
s Panthera_onca.PanOnc_flattened_line_3271                  147181 14 +    230217 A-A-------------TG------------GT---TGT-A-----TTGA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 11
s Panthera_pardus.KV860321.1                                259890 14 +  18783137 A-A-------------TG------------GT---TGT-A-----TTGA
i Panthera_pardus.KV860321.1                             C 0 I 11
s Panthera_tigris.KE722367.1                               4717037 14 -   8748460 A-A-------------TG------------GT---TGT-A-----TTGA
i Panthera_tigris.KE722367.1                             C 0 I 11
s Pantholops_hodgsonii.KE114653.1                          1264435 14 -   2937107 A-A-------------TA------------GT---TAC-C-----TCAA
i Pantholops_hodgsonii.KE114653.1                        C 0 I 9
s Papio_anubis.CM001495.2                                183438230 10 + 183742232 -----------------g------------tt---tat-g-----tt-g
i Papio_anubis.CM001495.2                                I 1 C 0
s Papio_cynocephalus.k141_4307930                             1923 10 +     20448 -----------------G------------TT---TAT-G-----TT-G
i Papio_cynocephalus.k141_4307930                        I 1 C 0
s Papio_hamadryas.Contig39                                20558728 10 +  20919399 -----------------G------------TT---TAT-G-----TT-G
i Papio_hamadryas.Contig39                               I 1 C 0
s Papio_kindae.k141_1936966                                    666 10 +     41871 -----------------G------------TT---TAT-G-----TT-G
i Papio_kindae.k141_1936966                              I 1 C 0
s Papio_papio.k141_802527                                     3952 10 +     27711 -----------------G------------TT---TAT-G-----TT-G
i Papio_papio.k141_802527                                I 1 C 0
s Papio_ursinus.k141_3428135                                  4037 10 +      9205 -----------------G------------TT---TAT-G-----TT-G
i Papio_ursinus.k141_3428135                             I 1 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8916 14 -     78924 A-A-------------TG------------GT---TGT-G-----TTGA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 11
s Perodicticus_ibeanus.k141_855320                            4740 13 +     13100 A-A-------------TG------------AT---TAT-G-----CT-A
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             3108 13 +     25941 A-A-------------TG------------AT---TAT-G-----CT-A
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25352 14 +     32600 T-A-------------TT------------AA---AAA-A--A--TT-A
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25924  9 -     29689 ---------------------------------------CTTATAGT-A
i Petromus_typicus.PetTyp_scaffold_42190                 I 7 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8596 14 +     63832 A-A-------------TA------------GT---TAT-G-----CTAG
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 9
s Piliocolobus_badius.k141_1234363                           38691 25 +     62158 --aaaaaaaaaaaaaaTG------------TC---TAT-G-----TT-G
i Piliocolobus_badius.k141_1234363                       I 3 C 0
s Piliocolobus_gordonorum.k141_381342                        33428 10 +     89929 -----------------G------------TC---TAT-G-----TT-G
i Piliocolobus_gordonorum.k141_381342                    I 14 C 0
s Piliocolobus_kirkii.k141_448987                            34844 10 +     51399 -----------------G------------TC---TAT-G-----TT-G
i Piliocolobus_kirkii.k141_448987                        I 14 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14291064 26 -  14605196 a-aaaaaaaaaaaaaatg------------tc---tat-g-----tT-G
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              512 13 +     22620 A-A-------------TG------------GT---TAT-G-----TT-G
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 12
s Platanista_gangetica.PlaMin_flattened_line_32310           34302 14 +     35617 A-A-------------TA------------GT---TAT-G-----CTAG
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 I 9
s Pongo_abelii.CM009266.2                                189126124 14 + 189387572 a-a------------gtg------------tt---tat-g-----tT-G
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9565730 14 +   9816681 a-a------------GTG------------TT---TAT-G-----TT-G
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68352 13 -     81375 a-a-------------TG------------TT---TAT-A-----TT-G
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                               173 13 +     19060 a-a-------------TG------------TT---TAT-A-----TT-G
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 10073 14 -     22811 AGA-------------TG------------GG---CAA-A-----TT-G
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2592423 13 -   4620579 a-a-------------tg------------GT---TAT-G-----TT-A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986437 13 +   2598838 A-A-------------TG------------GT---TAT-G-----TT-A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          24726 13 +     38485 A-A-------------TG------------GT---TAT-G-----TT-A
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                              887 13 +      4256 A-A-------------TG------------GT---TAT-G-----TT-A
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22245 13 +     35766 A-A-------------TG------------GT---TAT-G-----TT-A
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            428 13 -     24134 A-A-------------TG------------GT---TAT-G-----TT-A
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24240 13 -     67325 A-A-------------TG------------GT---TAT-G-----TT-A
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            485 13 -      6182 A-A-------------TG------------GT---TAT-G-----TT-A
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11284 13 -     21811 A-A-------------TA------------GT---AAT-G-----CT-G
i Pteronotus_parnellii.KE909381.1                        C 0 I 12
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36739 14 +     42204 A-A-------------TG------------GT---TGT-G-----TTGA
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 11
s Pteropus_alecto.KB030862.1                              22973756 13 +  28871421 a-a-------------tG------------GT---TAT-G-----TT-G
i Pteropus_alecto.KB030862.1                             C 0 I 9
s Pteropus_vampyrus.KN534172.1                                1693 13 -      8028 A-A-------------TG------------GT---TAT-G-----TT-G
i Pteropus_vampyrus.KN534172.1                           C 0 I 9
s Puma_concolor.QAVW01001104.1                            20270348 14 -  38429054 A-A-------------TG------------GT---TGC-A-----TTGA
i Puma_concolor.QAVW01001104.1                           C 0 I 11
s Pygathrix_cinerea.k141_1153803                             10184 13 -     91421 a-a-------------TG------------TT---TAT-A-----TT-G
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7604313 13 +   7812017 a-a-------------TG------------TT---TAT-A-----TT-G
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10153 13 -     72585 a-a-------------TG------------TT---TAT-A-----TT-G
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4973 14 +     55207 A-A-------------TA------------GT---CAC-C-----TTAA
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 9
s Rhinopithecus_bieti.k119_217274                             1868 13 -     11128 a-a-------------TG------------TT---TAT-A-----TC-G
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91231223 13 - 195417433 a-a-------------tg------------tt---tat-a-----tc-a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7666872 13 +   7961872 a-a-------------TG------------TT---TAT-A-----TC-G
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84742 13 -     96226 A-T-------------TG------------GT---TAT-G-----TC-G
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 12
s Saiga_tatarica.SaiTat_scaffold_373180                       3623 14 +      4321 A-A-------------TA------------GT---TAC-C-----TTAA
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 I 11
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151437 15 -    313613 AAA-------------TG------------GT---TAT-G-----GTGA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 9
s Semnopithecus_entellus.k141_11662                          14696 13 -     19888 a-aa-------------G------------TT---TAT-A-----TT-G
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21898 13 +     39453 a-aa-------------G------------TT---TAT-A-----TT-G
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2424 13 +     27826 a-aa-------------G------------TT---TAT-A-----TT-G
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1945 13 -     19483 a-aa-------------G------------TT---TAT-A-----TT-G
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      2007 13 +      7198 a-aa-------------G------------TT---TAT-A-----TT-G
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         10267 13 +     15514 a-aa-------------G------------TT---TAT-A-----TT-G
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187732 10 -    191337 -----------------G------------TT---GTT-T-----TT-A
i Solenodon_paradoxus.SolPar_flattened_line_5840         I 1 I 8
s Sorex_araneus.JH798187.1                                13647104 14 -  18376816 aaa-------------tg------------tt---tat-g-----tt-t
i Sorex_araneus.JH798187.1                               C 0 I 10
s Spermophilus_dauricus.KZ294078.1                         1948294 14 -   3870691 aaa-------------ta------------gt---aat-a-----ta-a
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27280 14 +     97271 A-A-------------TG------------GT---TGC-G-----TTGA
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 11
s Suricata_suricatta.SurSur_flattened_line_6629              14266 14 -    196729 T-A-------------TG------------GT---TGT-G-----TCAA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 11
s Sus_scrofa.CM000828.4                                   62882534 14 -  69701581 A-A-------------TG------------GT---TAT-G-----CTGA
i Sus_scrofa.CM000828.4                                  C 0 I 9
s Symphalangus_syndactylus.tarseq_199                      1088452 13 -   1523678 a-a-------------tg------------tt---tat-g-----tt-g
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6890 13 +     41958 A-A-------------TG------------TT---TAT-G-----TT-G
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 12
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69541 12 +    116680 A-A-------------TA------------GA---CAT-A-----T--G
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115278 13 -    156842 A-A-------------TG------------GT---GAT-G-----TT-G
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 12
s Tapirus_terrestris.TapTer_scaffold_755                    383733 13 +    539355 A-A-------------TG------------GA---TAT-G-----TT-G
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 12
s Tarsius_lariang.k141_2201908                               10726 12 +     70052 T-A-------------TA------------GT---C-T-T-----TT-A
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               15031 12 +     25099 T-A-------------TA------------GT---C-T-T-----TT-A
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186423274 10 + 186847797 -----------------g------------tt---tat-g-----tt-g
i Theropithecus_gelada.CM009954.1                        I 1 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103258  6 +    114563 A-A-------------TG------------GT-----------------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 10
s Tolypeutes_matacus.TolMat_scaffold_228639                   1929 13 +      8208 A-A-------------TG------------GG---CAT-A-----TT-G
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     79036 13 +    610378 A-A-------------TA------------GT---TAT-G-----CT-G
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 12
s Trachypithecus_auratus.k141_722599                          5998 13 -     20410 a-aa-------------G------------TT---TAT-A-----TT-G
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    10194 13 +     15221 a-aa-------------G------------TT---TAT-A-----TT-G
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        6099 13 +     19930 a-aa-------------G------------TT---TAT-A-----TT-G
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2529 13 -     19997 a-aa-------------G------------TT---TAT-A-----TT-G
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42648 13 -     60166 a-aa-------------G------------TT---TAT-A-----TT-G
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        10121 13 -     27529 a-aa-------------G------------TT---TAT-A-----TT-G
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     10061 13 -     18194 a-aa-------------G------------TT---TAT-A-----TT-G
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3796 13 -     21137 a-aa-------------G------------TT---TAT-A-----TT-G
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2499 13 -     10723 a-aa-------------G------------TT---TAT-A-----TT-G
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1651 13 +      9834 a-aa-------------G------------TT---TAT-A-----TT-G
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19969 13 +     32220 a-aa-------------G------------TT---TAT-A-----TT-G
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5934066 13 +   6242583 a-aa-------------G------------TT---TAT-A-----TT-G
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        3313 13 +     20839 a-aa-------------G------------TT---TAT-A-----TT-G
i Trachypithecus_pileatus.k141_2007326                   I 2 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    741 14 -      1748 A-A-------------TC------------AT---TAT-G-----CTAA
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 I 9
s Tupaia_chinensis.KB320699.1                              2149688 13 +   4065304 a-a-------------ta------------gt---taG-G-----AT-A
i Tupaia_chinensis.KB320699.1                            C 0 I 513
s Tupaia_tana.TupTan_flattened_line_97126                     3279 13 -     10553 A-A-------------TA------------GT---TAA-G-----AC-A
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 226
s Tursiops_truncatus.MRVK01000835.1                       15737796 14 +  33153633 A-A-------------TA------------GT---TAT-G-----CTAG
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 9
s Uropsilus_gracilis.UroGra_scaffold_12083                   51598 15 -     77625 AAA-------------TG------------GT---TAT-G-----TTTC
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 10
s Ursus_maritimus.KK499267.1                               4846982 14 -   5085361 A-A-------------TG------------GT---TGT-G-----TTGA
i Ursus_maritimus.KK499267.1                             C 0 I 11
s Varecia_rubra.k141_590885                                   7116 13 +     50397 A-A-------------TG------------GT---TAT-G-----TT-A
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              7164 13 +     24756 a-a-------------tg------------gt---tat-g-----tt-a
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368464 14 -   5488506 C-A-------------TG------------GT---TAT-G-----CTGA
i Vicugna_pacos.KN270157.1                               C 0 I 9
s Vulpes_lagopus.VulLag_flattened_line_30954                  7452 14 -     43706 A-G-------------TG------------TT---TGT-G-----TTCA
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 11
s Xerus_inauris.XerIna_scaffold_48378                        19790 14 -     24430 AAA-------------TA------------GT---AAT-A-----TT-A
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1907 14 +      2932 A-A-------------TG------------GT---TGT-G-----TTGA
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 I 9
s Zapus_hudsonius.ZapHud_scaffold_11398                      10062 14 +     63895 T-A-------------TA------------AA---AATGA-----TT-A
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11488 14 +     12536 a-a-------------ta------------GT---TAT-G-----CTAG
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 I 9
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Rhinolophus_sinicus.LVEH01000134.1                        366972  1 -   3329780 I
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Hipposideros_galeritus.HipGal_scaffold_29171               39868  1 +     43066 I
e Hipposideros_armiger.JXIK01000431.1                       108427  1 +   1711038 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galagoides_demidoff.k141_31856                              3217  0 -      3432 C
e Erythrocebus_patas.Contig38                             21200279  0 -  21539334 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1708 6 +     62944 a--aGAC-A
s Acinonyx_jubatus.LLWD01001279.1                           823359 1 -   1699592 --------C
i Acinonyx_jubatus.LLWD01001279.1                        I 11 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507072 1 -  29979442 --------C
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 11 C 0
s Ailurus_fulgens.LNAC01001112.1                             75296 1 -    347723 --------C
i Ailurus_fulgens.LNAC01001112.1                         I 11 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     65050 6 -     89534 A--AGAC-C
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9706 6 -     52922 A--GGAC-C
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9639 6 -     28001 A--GGAC-C
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                            85 6 -     18505 A--GGAC-C
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                            934 6 -     12518 A--GGAC-C
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675251 1 -   2318259 --------T
i Ammotragus_lervia.NIVO01071767.1                       I 9 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183201 1 +    412891 --------C
i Anoura_caudifer.AnoCau_scaffold_1412                   I 12 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97706 1 -    100397 --------T
i Antilocapra_americana.AntAmePen_scaffold_12469         I 9 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7348 6 +     20879 A--AGAC-A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14517 6 +     17124 A--AGAC-G
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2557 1 +     43469 --------C
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 12 C 0
s Avahi_laniger.k141_765380                                  49379 6 -     92717 A--AGAC-A
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              50004 6 +     85213 A--AGAC-A
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191675 1 +  23207421 --------C
i Balaenoptera_acutorostrata.KI537508.1                  I 9 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2141 1 -     18090 --------C
i Balaenoptera_bonaerensis.DF707048.1                    I 9 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26173 1 +     34529 --------T
i Beatragus_hunteri.BeaHun_scaffold_50177                I 9 C 0
s Bison_bison.KN261452.1                                    199215 1 -    288883 --------T
i Bison_bison.KN261452.1                                 I 9 C 0
s Bos_indicus.CM003047.1                                  20272420 1 +  48749331 --------T
i Bos_indicus.CM003047.1                                 I 9 C 0
s Bos_mutus.JH880303.1                                     1124976 1 -   1948126 --------T
i Bos_mutus.JH880303.1                                   I 7 C 0
s Bos_taurus.CM000203.6                                   18083058 1 +  45695690 --------T
i Bos_taurus.CM000203.6                                  I 9 C 0
s Bubalus_bubalis.KI419123.1                               2818547 1 +   4408762 --------T
i Bubalus_bubalis.KI419123.1                             I 9 C 0
s Camelus_bactrianus.KN276810.1                            9998996 1 -  17673402 --------C
i Camelus_bactrianus.KN276810.1                          I 9 C 0
s Camelus_dromedarius.KN272107.1                           2331460 1 -   7040546 --------C
i Camelus_dromedarius.KN272107.1                         I 9 C 0
s Camelus_ferus.KB017975.1                                  399736 1 -   1652518 --------C
i Camelus_ferus.KB017975.1                               I 9 C 0
s CanFam4.chr16                                           17795853 1 -  60362399 --------C
i CanFam4.chr16                                          I 11 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181910 1 -    185531 --------C
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 11 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031297 1 -   9314153 --------C
i Canis_lupus_dingo.QKWQ01000480.1                       I 11 C 0
s Canis_lupus_familiaris.chr16                            17955561 1 -  59632846 --------C
i Canis_lupus_familiaris.chr16                           I 11 C 0
s Canis_lupus_orion.HG994398.1                            18496862 1 +  63665305 --------C
i Canis_lupus_orion.HG994398.1                           I 11 C 0
s Capra_aegagrus.CM003241.1                               18829369 1 +  46296322 --------T
i Capra_aegagrus.CM003241.1                              I 9 C 0
s Capra_hircus.CM004588.1                                 18060089 1 -  44709034 --------T
i Capra_hircus.CM004588.1                                I 9 C 0
s Carlito_syrichta.NW_007259797.1                           141123 6 -    496798 A--AGAC-A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2975 1 -     11696 --------C
i Carollia_perspicillata.CarPer_scaffold_92756           I 12 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133721 6 +    179628 A--TGAG-A
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89340 1 +    217609 --------G
i Catagonus_wagneri.CatWag_scaffold_2839                 I 9 C 0
s Cavia_aperea.AVPZ01000300.1                             18347546 6 -  23392119 N--NNNN-N
i Cavia_aperea.AVPZ01000300.1                            I 5 I 60
s Cavia_porcellus.DS562891.1                              18359806 6 -  23407841 A--AGAC-A
i Cavia_porcellus.DS562891.1                             I 5 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98683 6 +    143979 A--AGAC-A
i Cavia_tschudii.CavTsc_scaffold_8919                    I 5 C 0
s Cephalopachus_bancanus.k141_2037105                         5039 6 -      8605 A--AGAC-A
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227973 1 +  27778364 --------C
i Ceratotherium_simum.JH767749.1                         I 12 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2691 1 -      3715 --------C
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     I 12 C 0
s Cercocebus_atys.KQ010504.1                               4470666 6 +   4669795 a--GGAC-C
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         9215 6 -     19203 A--GGAC-C
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3634 6 +      8260 A--GGAC-C
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3864 6 +     27781 A--GGAC-C
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         4021 6 -     20310 A--GGAC-C
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           7006 6 +     29689 A--GGAC-C
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            1444 6 +      9989 A--GGAC-C
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9690 6 -     27936 A--GGAC-C
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9716 6 -     11289 A--GGAC-C
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38812088 6 +  39242232 A--GGAC-C
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217787 6 -  21565898 A--GGAC-C
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34902 6 -     53127 A--GGAC-C
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        2190 6 +      7159 A--GGAC-C
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9709 6 -     27947 A--GGAC-C
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9685 6 +     17596 A--GGAC-C
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         40185 6 -     41420 A--GGAC-C
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4886 6 -      6351 A--AGA-CA
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16797 6 -     52598 A--AGAC-A
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12146 6 +     57038 A--AGAC-A
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1248577 6 +   2543920 C--AAAC-C
i Chinchilla_lanigera.JH722012.1                         I 5 C 0
s Chlorocebus_aethiops.ctg25                              18423648 6 -  18827391 A--GGAC-C
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       10091 6 -     50209 A--GGAC-C
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135417097 6 + 135778131 a--GGGC-C
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15245 6 +     19366 A--AGA-CA
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170344 6 +    839153 A--AGA-CA
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_172426               9718 5 -     10935 A--AGA--C
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          C 0 C 0
s Colobus_angolensis.KN981557.1                            1905623 6 +   2368649 A--GGAC-C
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199945287 6 + 200372422 A--GGAC-C
i Colobus_guereza.LG01                                   C 0 I 6
s Colobus_polykomos.k141_906115                              32158 6 +     84244 A--GGAC-C
i Colobus_polykomos.k141_906115                          C 0 I 6
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10592 1 -     20389 --------C
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 13 C 0
s Condylura_cristata.JH655891.1                           17546080 1 -  53390261 C--------
i Condylura_cristata.JH655891.1                          I 9 C 0
s Crocidura_indochinensis.CroInd_scaffold_283822              2807 4 +      4330 ---aaa--c
i Crocidura_indochinensis.CroInd_scaffold_283822         n 12 I 13
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24299 1 -     87169 --------C
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 17 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2932 6 +      5455 A--AGAC-A
i Cuniculus_paca.CunPac_flattened_line_231100            I 5 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1315 6 +      3576 A--AGAC-A
i Dasyprocta_punctata.DasPun_flattened_line_206793       I 5 I 248
s Dasypus_novemcinctus.JH564415.1                            61156 6 +   2246927 A--AGA-CA
i Dasypus_novemcinctus.JH564415.1                        C 0 I 5
s Daubentonia_madagascariensis.ctg71                      12532967 6 -  12879189 A--AGAC-A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811311 1 +  35494412 --------C
i Delphinapterus_leucas.KZ290073.1                       I 9 C 0
s Desmodus_rotundus.KZ672289.1                             8628006 1 +  20541912 --------C
i Desmodus_rotundus.KZ672289.1                           I 12 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669509 1 +   1390856 --------C
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 12 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2581 1 +    198055 --------C
i Diceros_bicornis.DicBicMic_scaffold_5955               I 12 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34356 6 +     67921 A--AGAC-A
i Dinomys_branickii.DinBra_scaffold_21862                I 5 C 0
s Dipodomys_ordii.KN672350.1                              18895874 6 +  37912305 a--caag-a
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  12092 6 +     14536 A--CAAG-A
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31569 6 -     42551 A--AGAC-A
i Dolichotis_patagonum.DolPat_scaffold_30833             I 5 C 0
s Eidolon_helvum.KE759718.1                                   7509 1 +     11740 --------C
i Eidolon_helvum.KE759718.1                              I 9 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310376 1 +    607251 --------T
i Elaphurus_davidianus.JRFZ01104969.1                    I 9 C 0
s Elephantulus_edwardii.JH947257.1                         1089086 5 +  10337057 a--aga--a
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16325855 1 -  41312741 --------C
i Enhydra_lutris.KZ291758.1                              I 11 C 0
s Eptesicus_fuscus.JH977646.1                              2144156 1 -  14770903 --------A
i Eptesicus_fuscus.JH977646.1                            I 12 C 0
s Equus_asinus.JREZ01000139.1                              1279857 1 +   4378816 --------C
i Equus_asinus.JREZ01000139.1                            I 12 C 0
s Equus_caballus.CM000403.2                               18527678 1 -  39960074 --------C
i Equus_caballus.CM000403.2                              I 12 C 0
s Equus_przewalskii.KK951119.1                               29693 1 +    498745 --------C
i Equus_przewalskii.KK951119.1                           I 12 C 0
s Erinaceus_europaeus.JH835339.1                           3325400 2 -   7059049 T--C-----
i Erinaceus_europaeus.JH835339.1                         I 8 C 0
s Erythrocebus_patas.Contig38                             21200279 6 -  21539334 G--GGAC-C
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10987 1 +    133382 --------C
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 9 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24924 1 -     44125 --------C
i Eubalaena_japonica.EubJap_flattened_line_31514         I 9 C 0
s Eulemur_albifrons.k141_342033                               9475 6 -     14127 A--AGAC-A
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                2173 6 -     16928 A--AGAC-A
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              11206 6 -     25546 A--AGAC-A
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             8391 6 +     26330 A--AGAC-A
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                  9648 6 +     23973 A--AGAC-A
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 8391 6 +     75513 A--AGAC-A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  6343 6 +     97555 A--AGAC-A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                             9269 6 +     26496 A--AGGC-A
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_2367191                                  2286 6 +      2552 A--AGAC-A
i Eulemur_rufus.k141_2367191                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                               9454 6 +    111500 A--AGAC-A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.AANG03299807.1                                   481 1 -       507 --------C
i Felis_catus.AANG03299807.1                             I 11 n 11
s Felis_catus_fca126.CM031415.1                           20192059 1 + 205367284 --------C
i Felis_catus_fca126.CM031415.1                          I 11 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  5584 1 -     36744 --------C
i Felis_nigripes.FelNig_flattened_line_20823             I 11 C 0
s Fukomys_damarensis.KN121974.1                             848583 8 +   3816255 ATAAGAC-A
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25537 6 +     26054 A--AGGC-A
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30425 6 +     49224 A--TGAT-A
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              10943 6 -     32273 a--agac-a
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186333092 6 + 186649187 a--agac-a
i Gorilla_gorilla.LT578341.1                             C 0 I 67
s Graphiurus_murinus.GraMur_scaffold_10447                   30153 6 +     78134 A--TAAC-A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           2539 6 -     19426 A--AGAC-A
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              7683 6 -     15286 A--AGAC-A
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                              9320 6 +     18253 A--AGAC-A
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                          9424 6 -     41752 A--AGAC-A
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                          9256 6 -     16460 a--agac-a
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238221 1 +    327341 --------C
i Helogale_parvula.HelPar_flattened_line_2585            I 11 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17573 1 +     36099 --------T
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 9 C 0
s Heterocephalus_glaber.JH602082.1                        20659466 6 +  22651954 A--AGAC-A
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 326 6 +       961 A--AGA-CA
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112131 1 +    128679 --------C
i Hippopotamus_amphibius.HipAmp_scaffold_9076            I 9 C 0
s Hoolock_leuconedys.ctg274                                    429835 6 +    630532 A--AGAC-A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40687 1 +     55795 --------C
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 11 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19931 6 -    143317 A--AGAC-A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 5 C 0
s Hylobates_agilis.k141_307679                               12766 6 -     15490 A--AGAC-A
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              54771 6 +     67168 A--AGAC-A
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189538421 6 - 191637585 a--agac-a
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3331314 6 -  11177569 a--agac-a
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      81009 6 +    135385 A--AGAC-A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514666 6 -   7955117 a--agaa-a
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   18239 6 +     31101 A--GGAC-A
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22528 1 +     23964 --------C
i Inia_geoffrensis.IniGeo_flattened_line_48101           I 9 C 0
s Jaculus_jaculus.JH725527.1                               8271444 6 -   9596543 a--aGAT-T
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1795 1 -      3359 --------C
i Kogia_breviceps.KogBre_flattened_line_192630           I 9 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    12567 1 -     42476 --------A
i Lasiurus_borealis.LasBor_scaffold_32767                I 257 C 0
s Lemur_catta.scaffold_24                                 15519783 6 -  30322482 A--AGAC-A
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6873 6 -     23766 A--AGAC-A
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24820 6 +     45836 A--AGAC-A
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31733 6 -     32627 A--AGAC-A
i Lepilemur_ruficaudatus.k141_420445                     C 0 I 57
s Lepilemur_septentrionalis.k141_185316                      22875 6 +     54090 A--AGAC-A
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3036191 1 +   3914936 --------C
i Leptonychotes_weddellii.KB714746.1                     I 11 C 0
s Lipotes_vexillifer.KE559953.1                             267580 1 -    662738 --------C
i Lipotes_vexillifer.KE559953.1                          I 9 C 0
s Lophocebus_aterrimus.ctg367                              1432210 6 +   1826925 A--GGAC-C
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             767 6 +     11245 A--AGAT-G
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999603 6 +   6120653 A--AGAT-G
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214597 6 -  43346337 A--AGA-CA
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951801 1 -  59628241 --------C
i Lycaon_pictus.CM007581.1                               I 11 C 0
s Macaca_arctoides.k141_2326796                               2031 6 +     40492 A--GGAC-C
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59671286 6 +  60120075 A--GGAC-C
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7786 6 -     26193 A--GGAC-C
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75583 6 -    114318 A--GGAC-C
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  1298 6 -     23192 A--GGAC-C
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10751 6 -     29190 A--GGAC-C
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  19318 6 +     37952 A--GGAC-C
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834406 6 + 187317192 a--GGAC-C
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452969 6 -  25927173 A--GGAC-C
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  75167 6 +     89720 A--GGAC-C
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 2165 6 +     20474 A--GGAC-C
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1966 6 -     14993 A--GGAC-C
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324838 6 -    668171 A--GGAC-C
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                  269 6 -     24072 A--GGAC-C
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               20905 6 -     45290 A--GGAC-C
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87617 1 +     94391 --------C
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 9 C 0
s Mandrillus_leucophaeus.scaffold280                      23932454 6 -  24302211 A--GGAC-C
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346631 6 +    752769 A--GGAC-C
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15695 1 +    737560 --------C
i Manis_javanica.JSZB01003497.1                          I 11 C 0
s Manis_pentadactyla.KN006162.1                              47084 1 -    317179 --------C
i Manis_pentadactyla.KN006162.1                          I 11 C 0
s Marmota_marmota.CZRN01000018.1                          33097516 6 -  40650429 a--agaa-a
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6873 1 -    207569 --------C
i Megaderma_lyra.MegLyr_scaffold_4542                    I 12 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6322 1 +     13704 --------C
i Mellivora_capensis.MelCap_flattened_line_69365         I 11 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3196 1 +     10310 --------C
i Mesoplodon_bidens.MesBid_scaffold_108144               I 9 C 0
s Microcebus_murinus.CM007674.1                           18283399 6 -  93316391 A--AGAC-A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    15462 5 -    145209 A--AGA--C
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13517 1 -     19307 --------C
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 12 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849188 1 +   8254450 --------C
i Miniopterus_natalensis.LDJU01000034.1                  I 10 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             33064 1 +     64694 --------C
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 10 C 0
s Miopithecus_ogouensis.k141_534055                           4204 6 -     28506 a--ggac-c
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62521 1 -     63350 --------C
i Mirounga_angustirostris.MirAng_flattened_line_22144    I 11 C 0
s Mirza_zaza.k141_952172                                      4753 6 -     37649 A--AGAC-A
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26701 1 -    437263 --------C
i Monodon_monoceros.MonMon_M_scaffold_103                I 9 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137918 1 -    366855 --------C
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 12 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                    427 1 +     82753 --------T
i Moschus_moschiferus.MosMos_scaffold_13123              I 9 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31422 1 +     37127 --------C
i Mungos_mungo.MunMun_flattened_line_23663               I 11 C 0
s Murina_feae.MurFea_scaffold_85699                           5217 1 +     14753 --------A
i Murina_feae.MurFea_scaffold_85699                      I 12 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2419 6 +     14296 A--TGAC-A
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               297753 1 -  14710649 --------C
i Mustela_putorius.JH418006.1                            I 11 C 0
s Myotis_brandtii.KE162005.1                                278387 1 -  10118263 --------A
i Myotis_brandtii.KE162005.1                             I 12 C 0
s Myotis_davidii.KB100139.1                                1585944 1 -   6019432 --------A
i Myotis_davidii.KB100139.1                              I 12 C 0
s Myotis_lucifugus.GL429869.1                              3902152 1 -   4330536 --------A
i Myotis_lucifugus.GL429869.1                            I 12 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32712 1 +     33610 --------A
i Myotis_myotis.MyoMyo_scaffold_28916                    I 12 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186191 6 +    196477 A--AAA-CA
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025587 3 -   3037898 -----AT-A
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               10204 6 +     21681 A--GGAC-C
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865657 1 +   7148211 --------C
i Neophocaena_asiaeorientalis.KZ687982.1                 I 9 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756486 1 +    783361 --------C
i Noctilio_leporinus.NocLep_scaffold_251                 I 11 I 2
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146062 1 -   9404916 --------C
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 11 C 0
s Nycticebus_bengalensis.LG01                            102574571 6 - 196305487 A--AGAT-G
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2257 6 +      8486 A--AGAT-G
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105744998 6 + 199412804 A--AGAT-G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355834 6 +   3988456 A--AGAT-T
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              500808 1 -   2017862 --------C
i Odobenus_rosmarus.KB229312.1                           I 9 C 0
s Odocoileus_virginianus.KZ100018.1                         144748 1 +    630418 --------T
i Odocoileus_virginianus.KZ100018.1                      I 9 C 0
s Orcinus_orca.KB316932.1                                  2781572 1 -  10937097 --------C
i Orcinus_orca.KB316932.1                                I 9 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               7145 5 -     18566 A--AGA--T
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458816 1 -    559221 --------C
i Otocyon_megalotis.JAEUCK010005147.1                    I 11 C 0
s Ovis_aries.CM001607.2                                   17585104 1 +  44047080 --------T
i Ovis_aries.CM001607.2                                  I 9 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173525 1 -    191736 --------T
i Ovis_canadensis.OviCan_scaffold_2572                   I 9 C 0
s Pan_paniscus.KQ411613.1                                    39061 6 +     80009 A--AGAC-A
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189137953 6 + 189151597 A--AGAC-A
i Pan_troglodytes.CM009242.2                             I 12 I 68
s Panthera_onca.PanOnc_flattened_line_3271                  147206 1 +    230217 --------C
i Panthera_onca.PanOnc_flattened_line_3271               I 11 C 0
s Panthera_pardus.KV860321.1                                259915 1 +  18783137 --------C
i Panthera_pardus.KV860321.1                             I 11 C 0
s Panthera_tigris.KE722367.1                               4717062 1 -   8748460 --------C
i Panthera_tigris.KE722367.1                             I 11 C 0
s Pantholops_hodgsonii.KE114653.1                          1264458 1 -   2937107 --------T
i Pantholops_hodgsonii.KE114653.1                        I 9 C 0
s Papio_anubis.CM001495.2                                183438240 6 + 183742232 A--GGAC-C
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1933 6 +     20448 A--GGAC-C
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20558738 6 +  20919399 A--GGAC-C
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                    676 6 +     41871 A--GGAC-C
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     3962 6 +     27711 A--GGAC-C
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  4047 6 +      9205 A--GGAC-C
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8941 1 -     78924 --------T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 11 C 0
s Perodicticus_ibeanus.k141_855320                            4753 6 +     13100 A--AGAC-G
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             3121 6 +     25941 A--AGAC-G
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25366 6 +     32600 A--CAAG-A
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     25933 6 -     29689 A--AGAC-A
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8619 1 +     63832 --------C
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 9 C 0
s Piliocolobus_badius.k141_1234363                           38716 6 +     62158 A--GGAC-C
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33438 6 +     89929 A--GGAC-C
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34854 6 +     51399 A--GGAC-C
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14291090 6 -  14605196 A--GGAC-C
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              537 1 +     22620 --------A
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 12 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34325 1 +     35617 --------C
i Platanista_gangetica.PlaMin_flattened_line_32310       I 9 C 0
s Pongo_abelii.CM009266.2                                189126138 6 + 189387572 A--AGAC-A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9565744 6 +   9816681 A--AGAC-A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68365 6 -     81375 A--GGAC-C
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                               186 6 +     19060 A--GGAC-C
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 10087 6 -     22811 A--AGA-CA
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2592436 6 -   4620579 A--AGAC-A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986450 6 +   2598838 A--AGAC-A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          24739 6 +     38485 A--AGAC-A
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                              900 6 +      4256 A--AGAC-A
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22258 6 +     35766 A--AGAC-A
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            441 6 -     24134 A--AGAC-A
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24253 6 -     67325 A--AGAC-A
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            498 6 -      6182 A--AGAC-A
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11309 1 -     21811 --------C
i Pteronotus_parnellii.KE909381.1                        I 12 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36764 1 +     42204 --------C
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 11 C 0
s Pteropus_alecto.KB030862.1                              22973778 1 +  28871421 --------C
i Pteropus_alecto.KB030862.1                             I 9 C 0
s Pteropus_vampyrus.KN534172.1                                1715 1 -      8028 --------C
i Pteropus_vampyrus.KN534172.1                           I 9 C 0
s Puma_concolor.QAVW01001104.1                            20270373 1 -  38429054 --------C
i Puma_concolor.QAVW01001104.1                           I 11 C 0
s Pygathrix_cinerea.k141_1153803                             10197 6 -     91421 A--GGAC-C
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7604326 6 +   7812017 A--GGAC-C
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10166 6 -     72585 A--GGAC-C
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4996 1 +     55207 --------T
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 9 C 0
s Rhinopithecus_bieti.k119_217274                             1881 6 -     11128 A--GGAC-C
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91231236 6 - 195417433 a--GGAC-C
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7666885 6 +   7961872 A--GGAC-C
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84767 1 -     96226 --------C
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 12 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3648 1 +      4321 --------T
i Saiga_tatarica.SaiTat_scaffold_373180                  I 11 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151461 1 -    313613 C--------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 9 I 21
s Semnopithecus_entellus.k141_11662                          14709 6 -     19888 A--GGAC-C
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21911 6 +     39453 A--GGAC-C
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2437 6 +     27826 A--GGAC-C
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1958 6 -     19483 A--GGAC-C
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      2020 6 +      7198 A--GGAC-C
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         10280 6 +     15514 A--GGAC-C
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187750 5 -    191337 T--AAA--A
i Solenodon_paradoxus.SolPar_flattened_line_5840         I 8 C 0
s Sorex_araneus.JH798187.1                                13647128 5 -  18376816 t--aaa--g
i Sorex_araneus.JH798187.1                               I 10 C 0
s Spermophilus_dauricus.KZ294078.1                         1948308 6 -   3870691 a--agaa-a
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27305 1 +     97271 --------C
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 11 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14291 1 -    196729 --------C
i Suricata_suricatta.SurSur_flattened_line_6629          I 11 C 0
s Sus_scrofa.CM000828.4                                   62882557 1 -  69701581 --------C
i Sus_scrofa.CM000828.4                                  I 9 C 0
s Symphalangus_syndactylus.tarseq_199                      1088465 6 -   1523678 a--agac-a
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6915 1 +     41958 --------C
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 12 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69553 6 +    116680 A--AAA-CA
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115303 1 -    156842 --------C
i Tapirus_indicus.TapInd_scaffold_9301                   I 12 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383758 1 +    539355 --------C
i Tapirus_terrestris.TapTer_scaffold_755                 I 12 C 0
s Tarsius_lariang.k141_2201908                               10738 6 +     70052 A--ATAC-A
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               15043 6 +     25099 A--ATAC-A
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186423284 6 + 186847797 A--GGAC-C
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103274 6 +    114563 A--AGAC-A
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 10 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   1942 6 +      8208 A--AGA-CA
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     79061 1 +    610378 --------C
i Tonatia_saurophila.TonSau_scaffold_294                 I 12 C 0
s Trachypithecus_auratus.k141_722599                          6011 6 -     20410 A--GGAC-C
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    10207 6 +     15221 A--GGAC-C
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        6112 6 +     19930 A--GGAC-C
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2542 6 -     19997 A--GGAC-C
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42661 6 -     60166 A--GGAC-C
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        10134 6 -     27529 A--GGAC-C
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     10074 6 -     18194 A--GGAC-C
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3809 6 -     21137 A--GGAC-C
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2512 6 -     10723 A--GGAC-C
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1664 6 +      9834 A--GGAC-C
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19982 6 +     32220 A--GGAC-C
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5934079 6 +   6242583 A--GGAC-C
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        3326 6 +     20839 A--GGAC-C
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    764 1 -      1748 --------T
i Tragulus_javanicus.TraJav_scaffold_140459              I 9 I 20
s Tupaia_chinensis.KB320699.1                              2150214 6 +   4065304 a--agac-a
i Tupaia_chinensis.KB320699.1                            I 513 I 36
s Tupaia_tana.TupTan_flattened_line_97126                     3518 6 -     10553 a--agaC-A
i Tupaia_tana.TupTan_flattened_line_97126                I 226 I 36
s Tursiops_truncatus.MRVK01000835.1                       15737819 1 +  33153633 --------C
i Tursiops_truncatus.MRVK01000835.1                      I 9 C 0
s Ursus_maritimus.KK499267.1                               4847007 1 -   5085361 --------C
i Ursus_maritimus.KK499267.1                             I 11 C 0
s Uropsilus_gracilis.UroGra_scaffold_97021                    2018 1 -      4736 C--------
i Uropsilus_gracilis.UroGra_scaffold_97021               I 47 I 81
s Varecia_rubra.k141_590885                                   7129 6 +     50397 A--AGAC-A
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              7177 6 +     24756 a--agac-a
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368487 1 -   5488506 --------C
i Vicugna_pacos.KN270157.1                               I 9 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7477 1 -     43706 --------C
i Vulpes_lagopus.VulLag_flattened_line_30954             I 11 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19804 6 -     24430 A--AGAC-A
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1930 1 +      2932 --------C
i Zalophus_californianus.ZalCal_flattened_line_63728     I 9 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      10076 6 +     63895 A--AGAC-C
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11511 1 +     12536 --------C
i Ziphius_cavirostris.ZipCav_flattened_line_71469        I 9 C 0
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Rhinolophus_sinicus.LVEH01000134.1                        366972 1 -   3329780 I
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Hipposideros_galeritus.HipGal_scaffold_29171               39868 1 +     43066 I
e Hipposideros_armiger.JXIK01000431.1                       108427 1 +   1711038 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galagoides_demidoff.k141_31856                              3217 0 -      3432 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1714 68 +     62944 ATGT-TT-C------CA-T-CCACAGA--TCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGT-G--------A---AC-AA-AA----A
s Acinonyx_jubatus.LLWD01001279.1                           823360 64 -   1699592 --------AAGAG--CA-T-CCATAGA--TCC-AAC--A-GATT-T-GCCCTC-AAGTTAC-A----------------------------A-A-CTAT-TT-T---CT----------G---AA---G--------A---AC-AA-AA----A
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507073 67 -  29979442 --------TAGA-A-CA-C-CCATAGA--TCC-AAC--A-GATT-T-GCCCTC-AAGTTAC-A----------------------------A-G-CTCT-TT-T---GT----------A---AACTAG--------A---AC-AA-AA----A
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             75297 45 -    347723 --------TAGAG---A-T-CCACAGA--TCT--CT--A-GATT-T-GTCCTC-AAGTTAC-A----------------------------A-A-CTTT-------------------------------------------------------
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 18
s Allactaga_bullata.AllBul_scaffold_9566                     65056 68 -     89534 A--T-TT-C------CA-T-CCACAGT--TGT-ATG--A-GATT-T-GCTCTC-AAATTAT-A----------------------------A-A-CTAT-TT-T---AT----------ACAAAAGCAA--------AACAAA-----------
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 2
s Allenopithecus_nigroviridis.k141_3361533                    9712 69 -     52922 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9645 69 -     28001 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                            91 69 -     18505 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                            940 69 -     12518 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675252 67 -   2318259 --------GAGA--CTG-C-CCACAGA--TCT-GAG--A-GATT-T-GCCATC-AAATTAC-A----------------------------A-A-GTAT-T-GT---GT----------A---AAGTAG--------A---AC-AA-AA----T
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183202 61 +    412891 --------CACAG--TG-T-CCATCGA--TCC-AAG--A-AATT-T-GCCCTC-AAACTAC-A----------------------------A-A-CTGC-T-AA---GT----------G---TTGTAG--------A---A------------
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 2
s Antilocapra_americana.AntAmePen_scaffold_12469             97707 67 -    100397 --------GAGA--CTA-T-CCACAGA--TCC-GAG--A-GATT-T-GCCATC-AAATTGC-A----------------------------A-A-CTGT-T-GT---GT----------A---AAGTAG--------A---AC-AA-AA----T
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7354 64 +     20879 AAGT-TC-A------TA-T-CCATATT--TCT-AAG--A-CATT-T-GTCCTT-CAATTAT-A----------------------------A-A-CTGCTT--T---GT----------A---AAGTCA--------A---AC-----------
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 6
s Arctocebus_calabarensis.k141_288239                        14523 65 +     17124 -----TT-T------TG-T-CCACAGA--TAT-GAA--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGC-T--TT--GC----------A---AAGTAG--------A---AT-AA-AA----A
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2558 61 +     43469 --------CAGAG--TG-T-CCATAGA--TCC-AAG--A-GATT-T-GCCTTC-AAATTAC-A----------------------------A-C-CTGT-T-GA---GT----------G---TTGTAG--------A---A------------
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 2
s Avahi_laniger.k141_765380                                  49385 69 -     92717 AAGT-TT-C------CA-T-CCATAGA--ACT-AAA--A-GATT-T-GCCCTC-AGATCAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AT-AA-AA----A
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              50010 69 +     85213 AAGT-TT-C------CA-T-CCATAGA--ACT-AAA--A-GATT-T-GCCCTC-AGATCAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AT-AA-AA----A
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191676 67 +  23207421 --------AAGA--CTA-T-CCATAGA--CCC-AAG--A-GATC-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-TT-T---AT----------A---AAGTAG--------A---AC-AA-AA----T
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2142 67 -     18090 --------AAGA--CTA-T-CCATAGA--CCC-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-TT-T---AT----------A---AAGTAG--------A---AC-AA-AA----T
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26174 67 +     34529 --------GAGA--CTG-C-CCACAGA--TCT-GAG--A-GATT-T-GCCATC-AAATTAC-A----------------------------A-A-CTAT-T-GT---GT----------A---AAGTAG--------A---AC-AA-AA----T
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    199216 67 -    288883 --------GAGA--CTA-T-CCACCGA--TCT-GAG--A-GATT-T-GCCATC-AAATTAC-A----------------------------A-A-CTAT-T-GT---GT----------A---AAGTAG--------A---AC-AA-AA----T
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20272421 67 +  48749331 --------GAGA--CTA-T-CCACAGA--TCT-GAG--A-GATT-T-GCCATC-AAATTAC-A----------------------------A-A-CTAT-T-GT---GT----------A---AAGTAG--------A---AC-AA-AA----T
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1124977 67 -   1948126 --------GAGA--CTA-T-CCACAGA--TCT-GAG--A-GATT-T-GCCATC-AAATTAC-A----------------------------A-A-CTAT-T-GT---GT----------A---AAGTAG--------A---AC-AA-AA----T
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18083059 67 +  45695690 --------GAGA--CTA-T-CCACAGA--TCT-GAG--A-GATT-T-GCCATC-AAATTAC-A----------------------------A-A-CTAT-T-GT---GT----------A---AAGTAG--------A---AC-AA-AA----T
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2818548 67 +   4408762 --------GAGA--CTA-T-CCACAGA--TCT-GAG--A-GATT-T-GCTATC-AAATTAC-A----------------------------A-A-CTAT-T-GT---GT----------A---AAGTAG--------A---AC-AA-AA----T
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9998997 67 -  17673402 --------CAGA--CCA-T-CCACAGA--TCC-AAG--A-GATC-T-GGCCTC-AAATTAC-A----------------------------A-A-CTGT-TT-T---AC----------A---AAAGAG--------G---AC-AA-AA----T
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331461 67 -   7040546 --------CAGA--CCA-T-CCACAGA--TCC-AAG--A-GATC-T-GGCCTC-AAATTAC-A----------------------------A-A-CTGT-TT-T---AC----------A---AAAGAG--------G---AC-AA-AA----T
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399737 67 -   1652518 --------CAGA--CCA-T-CCACAGA--TCC-AAG--A-GATC-T-GGCCTC-AAATTAC-A----------------------------A-A-CTGT-TT-T---AC----------A---AAAGAG--------G---AC-AA-AA----T
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795854 66 -  60362399 --------TA-A-AGCA-T-CTATACA--TGC-AAC--A-GATT-T-GCCCTC-AAGTTAC-A----------------------------A-A-CTAT-TT-T---GT----------A---AAGTAG--------A---A--AA-AA----A
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181911 66 -    185531 --------TA-A-AGCA-T-CTATACA--TGC-AAC--A-GATT-T-GCCCTC-AAGTTAC-A----------------------------A-A-CTAT-TT-T---GT----------A---AAGTAG--------A---A--AA-AA----A
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031298 66 -   9314153 --------TA-A-AGCA-T-CTATACA--TGC-AAC--A-GATT-T-GCCCTC-AAGTTAC-A----------------------------A-A-CTAT-T-tt---gt----------a---aagtag--------a---a--aa-aa----a
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955562 66 -  59632846 --------TA-A-AGCA-T-CTATACA--TGC-AAC--A-GATT-T-GCCCTC-AAGTTAC-A----------------------------A-A-CTAT-T-tt---gt----------a---aagtag--------a---a--aa-aa----a
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496863 66 +  63665305 --------TA-A-AGCA-T-CTATACA--TGC-AAC--A-GATT-T-GCCCTC-AAGTTAC-A----------------------------A-A-CTAT-T-tt---gt----------a---aagtag--------a---a--aa-aa----a
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18829370 67 +  46296322 --------GAGA--CTG-C-CCACAGA--TCT-GAG--A-GATT-T-GCCATC-AAATTAC-A----------------------------A-A-GTAT-T-GT---GT----------A---AAGTAG--------A---AC-AA-AA----T
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18060090 67 -  44709034 --------GAGA--CTG-C-CCACAGA--TCT-GAG--A-GATT-T-GCCATC-AAATTAC-A----------------------------A-A-GTAT-T-GT---GT----------A---AAGTAG--------A---AC-AA-AA----T
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           141129 69 -    496798 AAGT-TT-C------CA-T-CCATGGA--TCT-AAG--A-GACT-T-GCCTTC-AGGTTAC-A----------------------------A-A-CTGC-T--TT--gt----------a---aagagg--------a---ac-aa-aa----a
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                2976 60 -     11696 --------CAGAG--CG-C-CCCTAGA--CCC-ACG--A-GATT-T-GCCCTC-AAA-TAC-A----------------------------G-C-CTGC-T-GA---GT----------A---CTGTAG--------A---A------------
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 2
s Castor_canadensis.CasCan_scaffold_2074                    133727 66 +    179628 AAGT-TT-C------CA-T--CATACT--TCT-AAG--A-GATT-T-GCTCTC-ATATTAT-A----------------------------A-A-CCGT-TT-T---GT----------A---AAGTTA-----CACA---AA-----------
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 2
s Catagonus_wagneri.CatWag_scaffold_2839                     89341 61 +    217609 --------AAGA--CCA-T-CCATAGA--TCC-AAA--A-GATT-T-GTTCTC-AT------A----------------------------A-A-CT---TT-T---AT----------A---AAGTAG--------A---AC-AAAAA----T
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18347612  2 -  23392119 ----------------------------------------------------------------------------------------------------------------------------------------------------N----N
i Cavia_aperea.AVPZ01000300.1                            I 60 I 184
s Cavia_porcellus.DS562891.1                              18359812 49 -  23407841 AAAT-TT-C------CA-T-TTATAGA--CTT-AAA--AGGCTA-T-GTCCTC-CAACTAT-A----------------------------A-A-ATg--------------------------------------------------------
i Cavia_porcellus.DS562891.1                             C 0 I 197
s Cavia_tschudii.CavTsc_scaffold_8919                        98689 49 +    143979 AAAT-TT-C------CA-T-TTATAGA--CTT-AAA--AGGATA-T-GTCCTC-AAACCAT-A----------------------------A-A-ATG--------------------------------------------------------
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 I 194
s Cephalopachus_bancanus.k141_2037105                         5045 69 -      8605 AAGT-TT-C------CA-T-CCATGGA--TCT-AAG--A-GACT-T-GCCTTC-AGGTTAC-A----------------------------A-A-CTGC-T--TT--GT----------A---AAGAGG--------A---AC-AA-AA----A
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12227974 67 +  27778364 --------CAGAG--CA-T-CCATAGA--TCC-GAG--A-GATT-T-GCCTTC-AAATTAC-A----------------------------A-A-CTGT-TT-T---GT----------A---AAGTAG--------A---AC-AA-AA----A
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2692 67 -      3715 --------CAGAG--CA-T-CCATAGA--TCC-GAG--A-GATT-T-GCCTTC-AAATTAC-A----------------------------A-A-CTGT-TT-T---GT----------A---AAGTAG--------A---AC-AA-AA----A
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470672 69 +   4669795 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         9221 69 -     19203 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3640 71 +      8260 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TTTTGT----------A---AAGTAG--------A---AC-AG-AA----A
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3870 69 +     27781 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         4027 69 -     20310 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AGATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           7012 69 +     29689 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AGATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            1450 69 +      9989 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9696 69 -     27936 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GC----------A---AAGTAG--------A---AC-AG-AA----A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9722 69 -     11289 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38812094 69 +  39242232 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AGATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217793 69 -  21565898 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AGATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34908 69 -     53127 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        2196 69 +      7159 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AGATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9715 69 -     27947 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCTCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-GG-AA----A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9691 69 +     17596 ATGT-TT-C------CA-T-CCACAGA--GTT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         40191 69 -     41420 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4892 57 -      6351 GAGT-CTCCAGAG--CA-G-CCACAGA--CCC-AAG--A-AACC-A-GCCCTC-AAGTTGC-A----------------------------C-A-CTCT-C-AT--------------------------------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 I 12
s Cheirogaleus_major.k141_333249                             16803 53 -     52598 AAGT-TT-C------CA-T-CCATAGA--TCT-AAA--A-GATT-T-GCCCTC-GGATTAC-A----------------------------A-A-CTG--T--TT--GT---------------------------------------------
i Cheirogaleus_major.k141_333249                         C 0 I 14
s Cheirogaleus_medius.k141_1055463                           12152 68 +     57038 AAGT-TT-C------CA-T-CCATAGA--TCT-AAA--A-GATT-T-GCCCTC-GGATTAC-A----------------------------A-A-CTG--T--TT--GT----------A---AAGTAG--------A---AC-AA-AC----A
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1248583 22 +   2543920 AAAA-TT-C------CA-T-CCATAGA--CCT-AA-----------------------------------------------------------------------------------------------------------------------
i Chinchilla_lanigera.JH722012.1                         C 0 I 2551
s Chlorocebus_aethiops.ctg25                              18423654 69 -  18827391 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       10097 69 -     50209 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135417103 69 + 135778131 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15251 74 +     19366 GAGT-TTCCAGAG--CA-T-CCACAGA--TCC-AAG--A-GATT-C-ACCCTC-AAATTGC-A----------------------------A-A-CTCT-T-GT---GG----------C---AAGCAA--------A---GG-GA-AA----A
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170350 74 +    839153 GAGT-TTCCAGAG--CA-T-CCACAGA--TCC-AAG--A-GATT-C-ACCCTC-AAATTGC-A----------------------------A-A-CTCT-T-GT---GG----------C---AAGCAA--------A---GG-GA-AA----A
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_172426               9723 64 -     10935 TG-T-TT-CTGAG--CA-T-CCACAGA--ACC-AAG--A-GATT-C-ACCTTC-AAACTGC-A----------------------------A-A-CTCC-T-AT---GA----------A---AGCTTA-------------------------
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          C 0 I 11
s Colobus_angolensis.KN981557.1                            1905629 69 +   2368649 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-GG-AA----A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199945299 69 + 200372422 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-GG-AA----A
i Colobus_guereza.LG01                                   I 6 C 0
s Colobus_polykomos.k141_906115                              32170 69 +     84244 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-GG-AA----A
i Colobus_polykomos.k141_906115                          I 6 C 0
s Condylura_cristata.JH655891.1                           17546081 55 -  53390261 --------CAGAG--TT-T-CTATGGA--ACC-AAG--A-GATT-T-GCCctc-aaaatgc-a----------------------------a-a-tt---t-tt---at----------a---cAGC---------------------------
i Condylura_cristata.JH655891.1                          C 0 I 8
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10593 68 -     20389 --------CAGAG--CA-T-CCATAAA--TCC-AAG--A-AATT-T-GCCCTC-AAATTAC-A----------------------------AAA-CTGT-TT-T---GT----------A---AAGTTG--------A---AT-AA-CA----A
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_109268              7646 74 +      9948 --------CA-A-AATT-T-TCACAGA--CCC-AAG--A-GATT-T-TTCTTC-AAATTAC-T----------------------------A-A-TTGG-TT-T---CTGAGAAA-AATA-A-AA---A--------A---GC-AA-AA----A
i Crocidura_indochinensis.CroInd_scaffold_109268         I 12 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24300 67 -     87169 --------TAGAG--GA-T-CCATAGA--TCC-AAC--A-GATT-T-GCCCTC-AAGTTAC-A----------------------------A-A-CTAT-TT-T---GT----------A---AAGTAG--------A---AC-AA-AA----A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 2938 48 +      5455 AAAT-TT-C------CA-T-CTATAGA--CAT-AAA--A-GAAA-T-GCTCTC-AAACTAT-A----------------------------A-A-GAG--------------------------------------------------------
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 I 229
s Dasyprocta_punctata.DasPun_flattened_line_102822            8133 48 +     10433 AAAT-TT-C------TA-T-CTATAGA--TTT-AAA--A-GATA-T-GTCCTC-AAACTAT-A----------------------------A-A-GTG--------------------------------------------------------
i Dasyprocta_punctata.DasPun_flattened_line_102822       n 248 I 324
s Dasypus_novemcinctus.JH564415.1                            61167 66 +   2246927 --------CAGAG--CT-C-CCATAGA--GCC-AAG--A--ATC-C-ACCCTC-AAATTGC-A----------------------------A-A-CTCT-T-GT---GT----------C---AAGTAG--------A---GG-GA-AA----G
i Dasypus_novemcinctus.JH564415.1                        I 5 C 0
s Daubentonia_madagascariensis.ctg71                      12532973 69 -  12879189 AAGT-TT-C------CA-T-CCATAGA--TCT-AAA--A-GATT-T-GCCCTC-AGATTGC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AA-AA----A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811312 67 +  35494412 --------AAGA--CTA-T-CCATAGA--TCC-AAG--A-GGTT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-TT-T---GT----------A---AAGTAG--------A---AC-AA-AA----T
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8628007 61 +  20541912 --------CAG-CA-TG-T-CCATAGA--TCC-AAG--A-GGTT-T-GCCCTC-AAATTAC-A----------------------------A-A-TTGT-T-GA---GT----------A---TTGTAG--------A---A------------
i Desmodus_rotundus.KZ672289.1                           C 0 I 2
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669510 67 +   1390856 --------CAGAG--CA-T-CCATAGA--TCC-GAG--A-GATT-T-GCCTTC-AAATTAC-A----------------------------A-A-CTGT-TT-T---GT----------A---AAGTAG--------A---AC-AA-AA----A
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2582 67 +    198055 --------CAGAG--CA-T-CCATAGA--TCC-GAG--A-GATT-T-GCCTTC-AAATTAC-A----------------------------A-A-CTGT-TT-T---GT----------A---AAGTAG--------A---AC-AA-AA----A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34362 48 +     67921 AAAT-TT-T------CA-T-CCATAGA--CCT-AAA--A-AATA-T-GCCCTC-AAACTAT-A----------------------------A-A-AGG--------------------------------------------------------
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 214
s Dipodomys_ordii.KN672350.1                              18895880 67 +  37912305 aAGT-TT-C------CA-C-CCATAGG--TCT-AAA--A-GAT--T-GCTTAT-aaatttg-a----------------------------a-a-atagtt-tt---gt----------a---aGACAA-----TACA---AA-----------
i Dipodomys_ordii.KN672350.1                             C 0 I 1
s Dipodomys_stephensi.DipSte_scaffold_75855                  12098 67 +     14536 AAGT-TT-C------CA-C-CCATAGG--TCT-AAA--A-GAT--T-ACTTAC-AAATTTG-A----------------------------A-A-ATAGTTT-T---GT----------A---AGACAA-----TACA---AA-----------
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 I 1
s Dolichotis_patagonum.DolPat_scaffold_30833                 31575 49 -     42551 AAAT-TT-C------CA-T-TTATAGA--CTT-AAA--AGGATA-T-GTCCTC-AAACTAT-A----------------------------A-A-ATG--------------------------------------------------------
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 I 191
s Eidolon_helvum.KE759718.1                                   7510 60 +     11740 --------CAGAG--CA-C-CTATAAA--TCC-AAG--T-GCTT-T-GCTCTC-AAATTGC-A----------------------------A-A-CTGT-TT-T---GT----------A---AAGTAG--------A----------------
i Eidolon_helvum.KE759718.1                              C 0 I 3
s Elaphurus_davidianus.JRFZ01104969.1                       310377 67 +    607251 --------GAGA--CTA-T-CCACAGA--TCC-GAG--A-GATT-T-GCCATC-AAATTAC-A----------------------------A-A-CTGT-T-Gt---gt----------a---aaatag--------a---ac-aa-aa----t
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1089091 65 +  10337057 gagt-tt-t--gaagc--a-TCACAGA--GCC-AAG--A-CAGT-C-ACCCTC-AATCTAC-A----------------------------A-A-CTCT-T-AC---AA----------A---AGTGGG--------G----------------
i Elephantulus_edwardii.JH947257.1                       C 0 I 4
s Enhydra_lutris.KZ291758.1                               16325856 65 -  41312741 --------TAGAG---A-T-CCATAGA--TCC-AAC--A-CATT-C-ACCCTC-AAGTTA--A----------------------------A-A-CTCT-T-AT---GA----------A---AAGTCG--------A---AC-AA-AA----A
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144157 68 -  14770903 --------CAG-GA-CA-T-CCATAAA--TCCTAAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T-AT---GT----------A---AACTAC--------A---AC-AG-AA----A
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279858 67 +   4378816 --------CAGAG--CC-T-CCATAGA--CTC-AAG--A-GGTT-T-GCCCTC-AAATAac-a----------------------------a-a-ctgt-t-tt---gc----------a---aagtaG--------A---AC-AA-AA----A
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527679 67 -  39960074 --------CAGAG--CC-T-CCATAGA--CTC-AAG--A-GGTT-T-GCCCTC-AAATAAc-a----------------------------a-a-ctgt-t-tt---gc----------a---aagtaG--------A---AC-AA-AA----A
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29694 67 +    498745 --------CAGAG--CC-T-CCATAGA--CTC-AAG--A-GGTT-T-GCCCTC-AAATAac-a----------------------------a-a-ctgt-t-tt---gc----------a---aagtaG--------A---AC-AA-AA----A
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3325402 67 -   7059049 --------CAGA-A-CA-T-TCAGAGA--GTC-AAA--G-GATT-A-GCTACc-aaattac-a----------------------------a-a-ttgt-t-ct---gt----------g---aAGTAG--------A---GC-AA-AA----A
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21200285 69 -  21539334 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           10988 67 +    133382 --------AAGA--CTA-T-CCATAGA--TCC-AAG--A-GATT-T-GTCCTC-AAATTAC-A----------------------------A-A-CTGT-TT-T---GT----------A---AAGTAG--------A---AC-AA-AA----T
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24925 67 -     44125 --------AAGA--CTA-T-CCATAGA--CCC-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-TT-T---GT----------A---AAGTAG--------A---AC-AA-AA----T
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Eulemur_albifrons.k141_342033                               9481 69 -     14127 AAGG-TT-C------CA-T-CCATAGA--TCT-AAA--A-GATT-T-GCCCTC-AGGTTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------G---AC-AA-AA----A
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                2179 69 -     16928 AAGG-TT-C------CA-T-CCATAGA--TCT-AAA--A-GATT-T-GCCCTC-AGGTTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------G---AC-AA-AA----A
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              11212 69 -     25546 AAGG-TT-C------CA-T-CCATAGA--TCT-AAA--A-GATT-T-GCCCTC-AGGTTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------G---AC-AA-AA----A
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             8397 69 +     26330 AAGG-TT-C------CA-T-CCATAGA--TCT-AAA--A-GATT-T-GCCCTC-AGGTTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------G---AC-AA-AA----A
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                  9654 69 +     23973 AAGG-TT-C------CA-T-CCATAGA--TCT-AAA--A-GATT-T-GCCCTC-AGGTTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------G---AC-AA-AA----A
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 8397 69 +     75513 AAGG-TT-C------CA-T-CCATAGA--TCT-AAA--A-GATT-T-GCCCTC-AGGTTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------G---AC-AA-AA----A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  6349 69 +     97555 AAGG-TT-C------CA-T-CCATAGA--TCT-AAA--A-GATT-T-GCCCTC-AGGTTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------G---AC-AA-AA----A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                             9275 69 +     26496 AAGT-TT-C------CA-T-CCATAGA--TCT-AAA--A-GATT-T-GCCCTC-AGGTTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------G---AC-AA-AA----A
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_2367191                                  2292 69 +      2552 AAGG-TT-C------CA-T-CCATAGA--TCT-AAA--A-GATT-T-GCCCTC-AGGTTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------G---AC-AA-AA----A
i Eulemur_rufus.k141_2367191                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                               9460 69 +    111500 AAGG-TT-C------CA-T-CCATAGA--TCT-AAA--A-GATT-T-GCCCTC-AGGTTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------G---AC-AA-AA----A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20233230 64 + 206538554 --------AAGAG--CA-T-CCATAGA--TCC-AAC--A-GATT-T-GCCCTC-AAGTTAC-A----------------------------A-A-CTAT-TT-T---CT----------G---AA---G--------A---AC-AA-AA----A
i Felis_catus.CM001381.2                                 I 7188 C 0
s Felis_catus_fca126.CM031415.1                           20192060 64 + 205367284 --------AAGAG--CA-T-CCATAGA--TCC-AAC--A-GATT-T-GCCCTC-AAGTTAC-A----------------------------A-A-CTAT-TT-T---CT----------G---AA---G--------A---AC-AA-AA----A
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  5585 64 -     36744 --------AAGAG--CA-T-CCATAGA--TCC-AAC--A-GATT-T-GCCCTC-AAGTTAC-A----------------------------A-A-CTAT-TT-T---CT----------G---AA---G--------A---AC-AA-AA----A
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             848591 48 +   3816255 GAAT-TT-C------CA-T-CCACATA--TCT-AAA--A-GATA-T-GCCCTC-AAATTCT-A----------------------------A-A-ctg--------------------------------------------------------
i Fukomys_damarensis.KN121974.1                          C 0 I 531
s Galeopterus_variegatus.GalVar_scaffold_56069               25543 68 +     26054 AAGT-TT-T------GA-T-CTGTGCT--TCT-AAG--A-GATT-T-GCCCTC-AAATTCC-A----------------------------A-A-CAGT-T--T---GT----------A---AAGTAG--------A---AC-AA-AA----A
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30431 63 +     49224 AAGT-TT-C------CA-T-TCATAGA--TCT-AAG--A-GATT-T-ATCCTC-AAATTAT-A----------------------------A-G-CTGA-T--T---GT----------A---GAGTAA--------A---AT-----------
i Glis_glis.GliGli_scaffold_19807                        C 0 I 2
s Gorilla_beringei.k141_3596273                              10949 68 -     32273 atgt-tt-C------CA-T-CCACAGA--TCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGT-G--------A---AC-AA-AA----A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.CYUI03001204.1                              8560 68 -     63219 atgt-tt-C------CA-T-CCACAGA--TCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGT-G--------A---AC-AA-AA----A
i Gorilla_gorilla.CYUI03001204.1                         I 660 I 5068
s Graphiurus_murinus.GraMur_scaffold_10447                   30159 47 +     78134 AAGT-TT-C------CA-T-TCATAGA--TCT-AAG--A-GATT-T-GTCCTC-AAATTAT-A----------------------------A-A-CT---------------------------------------------------------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 14
s Hapalemur_alaotrensis.k141_170648                           2545 69 -     19426 AAGG-TT-C------CA-T-CCATAGA--TTC-AAA--A-GATT-T-GCCCTC-AGATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------G---AC-AA-AA----A
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              7689 69 -     15286 AAGG-TT-C------CA-T-CCATAGA--TCC-AAA--A-GATT-T-GCCCAC-AGATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------G---AC-AA-AA----A
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                              9326 70 +     18253 AAGG-TT-C------AATT-CCATAGA--TCC-AAA--A-GATC-T-GCCCTC-AGATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------G---AC-AA-AA----A
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                          9430 69 -     41752 AAGG-TT-C------CA-T-CCATAGA--TCC-AAA--A-GATT-T-GCCCAC-AGATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------G---AC-AA-AA----A
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                          9262 70 -     16460 aaGG-TT-C------AA-TTCCATAGA--TCC-AAA--A-GATT-T-GCCCTC-AGATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------G---AC-AA-AA----A
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238222 39 +    327341 --------TAGAG--AA-T-CCATAGA--TCC-AAC--A-GATT-T-GCCCTC-AAATTA----------------------------------------------------------------------------------------------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 26
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17574 67 +     36099 --------GAGA--CTG-C-CCACAGA--TCT-GAG--A-GATT-T-GCCATC-AAACTAC-A----------------------------A-A-GTAT-T-GT---GT----------A---AAGTAG--------A---AC-AA-AA----T
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20659472 48 +  22651954 AAAT-TT-C------CA-T-CCACGGA--TCT-AAA--A-GATA-T-GCCCTC-AAATTAT-A----------------------------a-a-ctg--------------------------------------------------------
i Heterocephalus_glaber.JH602082.1                       C 0 I 201
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 332 73 +       961 CAGT-TT-CAGAG--AA-C-CCACAGA--GCT-AAG--A-GATA-C-ACCCTC-AAACTGC-T----------------------------A-A-CCCC-T-AT---GA----------A---AGTGTG--------A---GG-AG-GG----A
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108428  9 +   1711038 --------------------------------------------------------------------------------------------------------------------------------G--------A---AT-TA-AA----A
i Hipposideros_armiger.JXIK01000431.1                    I 1 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39869  9 +     43066 --------------------------------------------------------------------------------------------------------------------------------G--------A---AT-TA-AA----A
i Hipposideros_galeritus.HipGal_scaffold_29171           I 1 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112132 36 +    128679 --------AAGA--CTA-T-CCATAGA--TCC-AAG--A-GATT-T-GTCCTC-AAA-------------------------------------------------------------------------------------------------
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 I 24
s Hoolock_leuconedys.ctg274                                    429841 69 +    630532 ATGT-TT-C------CA-T-CCACAGA--TCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TC--GT----------A---AAGTAG--------A---AC-AC-AA----A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40688 67 +     55795 --------TAGAG--CA-T-CCATACA--TCC-AAC--A-GATT-T-GCCCTC-AAGTTAT-A----------------------------A-A-CTAT-TT-T---CT----------G---AAGTAG--------A---AC-AA-AA----A
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            19937 49 -    143317 AAAT-TT-C------CA-T-TTATAGA--CTT-AAA--AAGATT-T-GTCCTC-AAACTAT-A----------------------------A-A-ATA--------------------------------------------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 201
s Hylobates_agilis.k141_307679                               12772 69 -     15490 ATGT-TC-C------CA-T-CCACAGA--TAT-AAG--G-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AC-AA----A
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              54777 69 +     67168 ATGT-TT-C------CA-T-CCACAGA--TAT-AAG--G-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AC-AA----A
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189538427 69 - 191637585 atgt-tt-C------CA-T-CCACAGA--TAT-AAG--G-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AC-AA----A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3331320 69 -  11177569 atgt-tt-C------CA-T-CCACAGA--TAT-AAG--G-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AC-AA----A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      81015 63 +    135385 AAAT-TT-C------CA-T-CCATACA--TCT-AAA--A-GGTA-T-GCTCCT-GAATTAT-A----------------------------A-A-CTGT-T--T---TT----------A---CAGTAT--------A---AC-----------
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 204
s Ictidomys_tridecemlineatus.JH393364.1                    7514672 64 -   7955117 aagt-tt-a------aa-t-cCACCTT--TCT-AAG--A-GATT-T-GTCCTC-AAATTAT-A----------------------------A-A-CTGTTt--t---gt----------a---aagtaa--------a---ac-----------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 5
s Indri_indri.k141_3655594                                   18245 70 +     31101 AAGT-TT-C------CA-T-CCATAGA-ATCT-AAA--A-GATT-T-GCCCTC-AGATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AA-AA----A
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22529 67 +     23964 --------AAGA--CTC-T-CCATAGA--TCC-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-TT-T---GT----------A---AAGTAG--------A---AC-AA-AA----T
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271450 68 -   9596543 A--T-TT-C------TA-T-CCATAGT--TCT-AAG--A-TATT-T-GCTTTC-AAATTAT-A----------------------------A-A-CTGT-TT-T---at----------acaaaagcaa--------agcaaa-----------
i Jaculus_jaculus.JH725527.1                             C 0 I 2
s Kogia_breviceps.KogBre_flattened_line_192630                1796 67 -      3359 --------AAGA--CTA-T-CCATAGA--TCC-AAG--A-GATT-T-CCCCTC-AAATTAC-A----------------------------A-G-CTGT-TT-T---GT----------A---AAGTAG--------A---AC-AA-AA----T
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    12568 67 -     42476 --------CAG-GA-CA-T-TCATAAA--TTC-AAG--A-GATG-T-GTCCTC-AAATTAC-A----------------------------A-A-CTGT-TT-C---AT----------A---AAATAC--------A---AC-AA-AA----A
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15519789 69 -  30322482 AAGG-TT-C------CA-T-CCATAGA--TCC-AAA--A-GATT-T-GCCCTC-AGATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------G---AC-AA-AA----A
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6879 53 -     23766 AAGT-TT-C------TA-T-CCATCGA--TCT-AAA--A-GATT-T-GTCCTC-AGATTAC-A----------------------------A-A-CTGT-T--TT--G----------------------------------------------
i Lepilemur_ankaranensis.k141_596936                     C 0 I 4
s Lepilemur_dorsalis.k141_577674                             24826 53 +     45836 AAGT-TT-C------TA-T-CCATCGA--TCT-AAA--A-GATT-T-GTCCTC-AGATTAC-A----------------------------A-A-CTGT-T--TT--G----------------------------------------------
i Lepilemur_dorsalis.k141_577674                         C 0 I 4
s Lepilemur_ruficaudatus.k141_582783                           701 53 -      1589 AAGT-TT-C------TA-T-CCATCGA--TCT-AAA--A-GATT-T-GCCCTC-AGATTAC-A----------------------------A-A-CTGT-T--TT--G----------------------------------------------
i Lepilemur_ruficaudatus.k141_582783                     I 367 I 56
s Lepilemur_septentrionalis.k141_185316                      22881 53 +     54090 AAGT-TT-C------TA-T-CCATCGA--TCT-AAA--A-GATT-T-GTCCTC-AGATTAC-A----------------------------A-A-CTGT-T--TT--G----------------------------------------------
i Lepilemur_septentrionalis.k141_185316                  C 0 I 4
s Leptonychotes_weddellii.KB714746.1                       3036192 66 +   3914936 --------TAGAG--CA-T-CCATAGA--TCC-AAC--A-GATT-T-GCCCTC-AAGTTAC-A----------------------------A-A-CTCT-T--T---GT----------A---AAGTAG--------A---AC-AA-AA----A
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             267581 67 -    662738 --------AAGA--CTA-T-CCATAGA--TCC-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-TT-T---GT----------A---AAGTAG--------A---AC-AA-AA----T
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1432216 69 +   1826925 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTA-CA----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             773 65 +     11245 -----TT-T------TG-T-TCACAGA--CCT-AAA--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AT-AA-AA----A
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999609 65 +   6120653 -----TT-T------TG-T-TCACAGA--CCT-AAA--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AT-AA-AA----A
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214603 73 -  43346337 GAGT-TT-CAGAG--CC-C-CCATAGG--GCC-AGG--A-GATT-C-ACCCTC-AAGCTGC-A----------------------------A-G-CTtt-t-at---ga----------a---aatgga--------a---aa-aa-ga----a
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951802 66 -  59628241 --------TA-A-AGCA-T-CTATACA--TGC-AAC--A-GATT-T-GCCCTC-AAGTTAC-A----------------------------A-A-CTAT-t-tt---gt----------a---aagtag--------a---a--aa-aa----a
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               2037 69 +     40492 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59671292 69 +  60120075 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7792 69 -     26193 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--G-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75589 69 -    114318 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  1304 69 -     23192 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10757 69 -     29190 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  19324 69 +     37952 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834412 69 + 187317192 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25452975 69 -  25927173 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  75173 69 +     89720 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 2171 69 +     20474 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--G-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   1972 69 -     14993 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324844 69 -    668171 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                  275 69 -     24072 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               20911 69 -     45290 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87618 61 +     94391 --------CAGAG--CA-C-CTATAAA--TCC-AAG--T-GATT-T-GCTCTA-AAATTGC-A----------------------------A-A-CTGT-TTTT---GC----------A---AAGTAG--------A----------------
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 3
s Mandrillus_leucophaeus.scaffold280                      23932460 69 -  24302211 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346637 69 +    752769 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15696 54 +    737560 --------CAGAG--CA-T-CCATAGA--ACC-AAG--C-AATT-T-GCCCTC-AAATtgc-a----------------------------a-a-ttgt-t-tt---at----------a---a------------------------------
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              47085 54 -    317179 --------GAGAG--CA-T-CCATAGA--ACC-AAG--C-AATT-T-GCCCTC-AAATTgc-a----------------------------a-a-ttgt-t-tt---at----------a---a------------------------------
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097522 64 -  40650429 aagt-tt-a------aa-t-ccACCTT--TCT-AAG--A-GATT-T-GTCCTC-AAATTAT-A----------------------------A-A-CTGTTt--t---gt----------a---aagtaa--------a---ac-----------
i Marmota_marmota.CZRN01000018.1                         C 0 I 5
s Megaderma_lyra.MegLyr_scaffold_4542                         6874 67 -    207569 --------CAGAG--CA-T-CTATAGA--GCC-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTCT-TT-T---GT----------A---AAACAG--------A---AT-AA-AA----A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6323 65 +     13704 --------TAGAG---A-T-CCATAGA--TCC-AAC--A-GATT-C-ACCCTC-AAGTTA--A----------------------------A-A-CTCT-t-at---ga----------a---aagtag--------a---ac-aa-aa----a
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3197 67 +     10310 --------AAGA--CTA-T-CCATAGA--TCC-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-TT-T---GT----------A---AAGTAG--------A---AC-AA-AA----T
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18283405 68 -  93316391 AAGT-TT-C------CA-T-CCATAGG--TCT-AAA--A-GATT-T-GCCCTC-AGATTAC-A----------------------------A-A-CTG--T--TT--GT----------A---AAGTAG--------A---AC-AA-AA----A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    15467 44 -    145209 AAAGGGT-CAGAG--CT-T-CCATAGA--GTC-TAG--A-GACC-C-ACCCTC-AAAC------------------------------------------------------------------------------------------------
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 20
s Micronycteris_hirsuta.MicHir_scaffold_52381                13518 61 -     19307 --------CAGAG--TG-T-CCATAGA--TCC-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T-GA---GT----------A---TTGTAG--------A---A------------
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 2
s Miniopterus_natalensis.LDJU01000034.1                    1849189 67 +   8254450 --------CAGAG--CA-C-TCATAGA--TCC-AAG--A-GATT-T-GCCCTT-AAATCAC-A----------------------------A-A-CTGT-T-GT---GT----------A---AAGTAG--------A---AC-AA-AA----A
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             33065 67 +     64694 --------CAGAG--CA-T-TCATAGA--TCC-AAG--A-GATT-T-GCCCTT-AAATCAC-A----------------------------A-C-CTGT-T-GT---GT----------A---AAGTAG--------A---AC-AA-AA----A
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           4210 69 -     28506 atgt-tt-C------CA-T-CCACAGA--GCT-AAG--A-GATG-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62522 66 -     63350 --------TAGAG--CA-T-CCATAGA--TCC-AAC--A-GATT-T-GCCCTC-AAGTTAC-A----------------------------A-A-CTCT-T--T---GT----------A---AAGTAG--------A---AC-AA-AA----A
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      4759 49 -     37649 AAGT-TT-C------CA-T-CCATAGA--TCT-AAA--A-GATT-T-GCCCTC-AGATTAC-A----------------------------A-A-CTG--T-----------------------------------------------------
i Mirza_zaza.k141_952172                                 C 0 I 15
s Monodon_monoceros.MonMon_M_scaffold_103                    26702 67 -    437263 --------AAGA--CTA-T-CCATAGA--TCC-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-GTGT-TT-T---GT----------A---AAGTAG--------A---AC-AA-AA----T
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137919 66 -    366855 --------C-G-GAGTA-T-CTGCAAA--CCC-CAG--A-GACT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTAT-T-GT---GT----------G---ACGTAG--------A---AC-AA--A----A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                    428 67 +     82753 --------GAGA--CTA-T-CCACAGA--TTC-GAG--A-GATT-T-GCCATC-AAATTAC-A----------------------------A-A-CTGT-T-GT---AT----------A---AAGTAG--------A---AC-AA-AG----T
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31423 66 +     37127 --------TAGAG--AA-T-CCATAGA--TCC-AAC--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-C-AT-TT-T---GT----------G---AAGTAG--------A---AC-GA-AA----A
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5218 67 +     14753 --------CAG-G-GCA-T-CCATAAA--TCC-AAG--A-GATT-T-GTCCTC-AAATTAC-A----------------------------A-A-CTGT-T-AT---GT----------A---AAATAC--------A---AC-AA-AA----A
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2425 63 +     14296 AAGT-TT-T------CA-T-TCATGGA--TCT-GAG--A-GACT-T-GTCCTC-ATATTAT-A----------------------------A-A-CTGA-C--T---AT----------A---GAGTAA--------A---AC-----------
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 2
s Mustela_putorius.JH418006.1                               297754 65 -  14710649 --------TAGAG---A-T-CCATAGA--GCC-AAC--A-GATT-C-ATTCTC-AAGTTA--A----------------------------A-A-CTCT-T-at---ga----------a---aagtag--------a---ac-aa-aa----a
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                278388 67 -  10118263 --------CAG-G-GCA-T-CCATAAA--TCC-AAG--A-GATT-T-GCCCTA-AAATTAC-A----------------------------A-A-CTGT-T-At---gt----------a---aaatac--------a---ac-aa-aa----a
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1585945 67 -   6019432 --------CAG-G-GCA-T-CCATAAA--TCC-AAG--A-TATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTTT-T-at---gt----------a---aaatac--------a---ac-aa-aa----a
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902153 67 -   4330536 --------CAG-G-GCA-T-CCATATA--TCC-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T-at---gt----------a---aaatac--------a---ac-aa-aa----a
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32713 67 +     33610 --------CAG-G-GCA-T-CCATAAA--TCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T-AG---GT----------A---AAATAC--------A---AC-AA-AA----A
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186197 74 +    196477 GAGT-CTCCAGA-A-CA-T-TCATAGA--TCC-AAG--A-GATT-C-ACCCTC-AAATTGC-A----------------------------A-A-CTCT-T-GT---GG----------A---AAGCCA--------A---GG-GA-AA----A
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025590 63 -   3037898 TAGT-TT-C------TA-T-CCACAGA--TAC-AGG--A-GATT-T-GCTCTC-AAATTAT-C----------------------------A-g-ttgt-t--t---at----------a---aagaaa--------a---at-----------
i Nannospalax_galili.KL204047.1                          C 0 I 3
s Nasalis_larvatus.k141_413338                               10210 69 +     21681 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865658 67 +   7148211 --------AAGA--CTA-T-CCATAGA--TCC-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T-tt---gt----------a---aagtaa--------a---ac-aa-aa----t
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756489 54 +    783361 -------------------------AA--TCA-AAG--A-GATT-T-GCCCTC-AAACTAC-A----------------------------A-A-TGGT-T-GT---AT----------A---ATATCG--------A---AC-AA-AA----A
i Noctilio_leporinus.NocLep_scaffold_251                 I 2 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146063 66 -   9404916 --------TA-A-AGCA-T-CTATACA--TGC-AAC--A-GATT-T-GCCCTC-AAGTTAC-A----------------------------A-A-CTAT-T-tt---gt----------a---aagtag--------a---a--aa-aa----a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 1
s Nycticebus_bengalensis.LG01                            102574577 65 - 196305487 -----TT-T------TG-T-CTACAGA--CCT-ATA--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-TTGT-T--AT--GT----------A---AAGTAA--------A---AT-AA-AA----A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2263 65 +      8486 -----TT-T------TG-T-CTACAGA--CCT-ATA--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-TTGT-T--AT--GT----------A---AAGTAA--------A---AT-AA-AA----A
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105745004 65 + 199412804 -----TT-T------TG-T-CTACAGA--CCT-ATA--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-TTGT-T--CT--GT----------A---AAGTAA--------A---AT-AA-AA----A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355840 51 +   3988456 ATGT-AC-C------CA-T-CCATACA--GGT-AAA--T-GATT-T-GCCCTCCGAATGAC-A----------------------------C-AGCTGG-------------------------------------------------------
i Ochotona_princeps.JH802162.1                           C 0 I 16
s Odobenus_rosmarus.KB229312.1                              500809 66 -   2017862 --------TAGAG--CA-T-CCATAGA--TCC-AAC--A-GATT-T-GCCCTC-AAGTTAC-A----------------------------A-A-CTCT-T--T---GT----------A---AAGTAG--------A---AC-AA-AA----A
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         144749 67 +    630418 --------GAGA--CTA-T-CCACAGA--TCC-GAG--A-GATT-T-GCCATC-AAATTAC-A----------------------------A-A-CTGT-T-Gt---gt----------a---aaatag--------a---ac-aa-aa----t
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  2781573 67 -  10937097 --------AAGA--CTA-T-CCATAGA--TCC-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-TT-T---GT----------A---AAGTAG--------A---AC-AA-AA----T
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               7150 77 -     18566 GGAT-TT-CAGAG--CA-T-CCATACA--GTC-AAG--A-GATT-C-ACTCTC-AAACCAT-A----------------------------A-A-CTCC-TT-T---GA----------A---AGTGTG-----TGTG---TCGGG-GG----A
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458817 66 -    559221 --------TA-A-AGCA-T-CTATACA--TGC-AAC--A-GATT-T-GCCCTC-AAGTTAC-A----------------------------A-A-CTAT-T-tt---gt----------a---aagtag--------a---a--aa-aa----a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17585105 67 +  44047080 --------GAGA--CTG-C-CCACAGA--TCT-GAG--A-GATT-T-GCCATC-AAACTAC-A----------------------------A-A-GTAT-T-GT---GT----------A---AAGTAG--------A---AC-AA-AA----T
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173526 67 -    191736 --------GAGA--CTG-C-CCATAGA--TCT-GAG--A-GATT-T-GCCATC-AAACTAC-A----------------------------A-A-GTAT-T-GT---GT----------A---AAGTAG--------A---AC-AA-AA----T
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    39067 68 +     80009 ATGT-TT-C------CA-T-CCACAGA--TCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGT-G--------A---AC-AA-AA----A
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03001836.1                             24983 68 +     51860 ATGT-TT-C------CA-T-CCACAGA--TCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGT-G--------A---AC-AA-AA----A
i Pan_troglodytes.NBAG03001836.1                         I 6 I 23
s Panthera_onca.PanOnc_flattened_line_3271                  147207 67 +    230217 --------AAGAG--CA-T-CCATAGA--TCC-AAC--A-GATT-T-GCCCTC-AAGTTAC-A----------------------------A-A-CTAT-TT-T---CT----------G---AAGGAG--------A---AC-AA-AA----A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                259916 67 +  18783137 --------AAGAG--CA-T-CCATAGA--TCC-AAC--A-GATT-T-GCCCTC-AAGTTAC-A----------------------------A-A-CTAT-TT-T---CT----------G---AAGGAG--------A---AC-AA-AA----A
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4717063 67 -   8748460 --------AAGAG--CA-T-CCATAGA--TCC-AAC--A-GATT-T-GCCCTC-AAGTTAC-A----------------------------A-A-CTAT-TT-T---CT----------G---GAGGAG--------A---AC-AA-AA----A
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1264459 67 -   2937107 --------GAGA--CTG-C-CCACAGA--TCT-GAG--A-GATT-T-GCCACC-AAATTAC-A----------------------------A-A-GTAT-T-GT---GT----------A---AAGTAG--------A---AC-AA-AA----T
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183438246 68 + 183742232 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTA--A----------------------------A-A-CTGT-T--TG--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             1939 68 +     20448 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTA--A----------------------------A-A-CTGT-T--TG--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20558744 68 +  20919399 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTA--A----------------------------A-A-CTGT-T--TG--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                    682 68 +     41871 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTA--A----------------------------A-A-CTGT-T--TG--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     3968 68 +     27711 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTA--A----------------------------A-A-CTGT-T--TG--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  4053 68 +      9205 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTA--A----------------------------A-A-CTGT-T--TG--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      8942 40 -     78924 --------TAGAG--CA-T-CCATAGA--TTC-AAC--A-GATT-T-GCCCTC-AAGTTAC---------------------------------------------------------------------------------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 23
s Perodicticus_ibeanus.k141_855320                            4759 65 +     13100 -----TT-T------TG-T-CCACAGA--CCT-AAA--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGC-T--TT--GT----------A---AAGTAG--------A---AT-AA-AA----A
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             3127 65 +     25941 -----TT-T------TG-T-CCACAGA--CCT-AAA--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGC-T--TT--GT----------A---AAGTAG--------A---AT-AA-AA----A
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25372 67 +     32600 AAGT-TT-C------TG-T-CCATAGA--TCT-AAA--A-GAT--T-GCTCAC-AAATTTA-A----------------------------A-A-ATAATTT-T---GT----------A---AGACAA-----TACA---AA-----------
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 I 1
s Petromus_typicus.PetTyp_scaffold_42190                     25939 48 -     29689 AAAC-GT-C------CG-C-GCATGGG--TCT-AAA--A-GATA-T-GTTCTC-AGATTAC-A----------------------------A-A-CTG--------------------------------------------------------
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 I 188
s Phocoena_phocoena.PhoPho_flattened_line_24159               8620 67 +     63832 --------AAGA--CTA-T-CCATAGA--TCC-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-TT-T---GT----------A---AAGTAA--------A---AC-AA-AA----T
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38722 69 +     62158 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-GG-AA----A
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33444 69 +     89929 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-GG-AA----A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34860 69 +     51399 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-GG-AA----A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14291096 69 -  14605196 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-GG-AA----A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              538 67 +     22620 --------CAG-GA-GA-T-CCATAAA--TTC-AAG--A-TATT-T-GTCTTC-AAATTAC-A----------------------------A-A-CTGT-T-AT---GT----------A---CAATAC--------A---AC-AG-AA----A
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34326 67 +     35617 --------AAGA--CTA-T-CCATAGA--TCC-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-TT-T---GT----------A---AAGTAG--------A---AC-AA-AA----T
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189126144 71 + 189387572 ATGT-TT-C------CA-C-CCACAGATCTCT-AAG--A-GATT-T-GCCCTA-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AC-AA----A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9565750 71 +   9816681 ATGT-TT-C------CA-C-CCACAGATCTCT-AAG--A-GATT-T-GCCCTA-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AC-AA----A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68371 69 -     81375 GTGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                               192 69 +     19060 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 10093 73 -     22811 CAGT-TT-CAGAG--AA-C-CCACAGA--GCT-AAG--A-GATA-C-ACCCTC-AAACTGC-T----------------------------A-A-CCCC-T-AT---GA----------A---AGTGTG--------G---GG-AG-GG----A
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2592442 69 -   4620579 AAGG-TT-C------CA-T-CCATAGA--TCT-AAA--A-GATT-T-GCCCTC-AGATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------G---AC-AA-AA----A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986456 69 +   2598838 AAGT-TT-C------CA-T-CCATAGA--GCT-AAA--A-GATT-T-GCCCTC-AGATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AA-AA----A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          24745 69 +     38485 AAGT-TT-C------CA-T-CCATAGA--GCT-AAA--A-GATT-T-GCCCTC-AGATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AA-AA----A
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                              906 69 +      4256 AAGT-TT-C------CA-T-CCATAGA--GCT-AAA--A-GATT-T-GCCCTC-AGATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AA-AA----A
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22264 69 +     35766 AAGT-TT-C------CA-T-CCATAGA--GCT-AAA--A-GATT-T-GCCCTC-AGATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AA-AA----A
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            447 69 -     24134 AAGT-TT-C------CA-T-CCATAGA--GCT-AAA--A-GATT-T-GCCCTC-AGATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AA-AA----A
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24259 69 -     67325 AAGT-TT-C------CA-T-CCATAGA--GCT-AAA--A-GATT-T-GCCCTC-AGATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AA-AA----A
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            504 69 -      6182 AAGT-TT-C------CA-T-CCATAGA--GCT-AAA--A-GATT-T-GCCCTC-AGATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AA-AA----A
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11310 68 -     21811 --------CAGAGAGTA-T-CCATAGA--TCC-AAG--A-GGTT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGC-T-GT---GT----------A---ATGTAG--------A---AT-AC--A----A
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36765 65 +     42204 --------TAGAG---A-T-CCATAGA--TCC-AAT--A-CATT-C-ACCCTC-AAGTTA--A----------------------------A-A-CTCT-T-AT---GA----------A---AAGTCG--------A---AC-AA-AA----A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973779 60 +  28871421 --------CAGAG--CA-C-CTATAAA--TCC-AAG--T-GATT-T-GCTCTC-AAATTGC-A----------------------------A-A-CTGT-TT-T---GT----------A---AAGTAG--------A----------------
i Pteropus_alecto.KB030862.1                             C 0 I 3
s Pteropus_vampyrus.KN534172.1                                1716 60 -      8028 --------CAGAG--CA-C-CTATAAA--TCC-AAG--T-GATT-T-GCTCTC-AAATTGC-A----------------------------A-A-CTGT-TT-T---GT----------A---AAGTAG--------A----------------
i Pteropus_vampyrus.KN534172.1                           C 0 I 3
s Puma_concolor.QAVW01001104.1                            20270374 64 -  38429054 --------AAGAG--CA-T-CCATAGA--TCC-AAC--A-GATT-T-GCCCTC-AAGTTAC-G----------------------------A-A-CTAT-TT-T---CT----------G---AA---G--------A---AC-AA-AA----A
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             10203 69 -     91421 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7604332 68 +   7812017 ATGT-TT-C------CA-T--CACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10172 69 -     72585 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4997 67 +     55207 --------GAGA--TTA-T-CCACAGA--TCC-GAG--A-GATT-T-GCCATC-AAATTAC-A----------------------------A-A-CTGT-T-GT---GT----------A---AAATAG--------A---AC-AA-AA----T
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        366973  9 -   3329780 --------------------------------------------------------------------------------------------------------------------------------a--------a---at-aa-aa----a
i Rhinolophus_sinicus.LVEH01000134.1                     I 1 C 0
s Rhinopithecus_bieti.k119_217274                             1887 69 -     11128 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91231242 69 - 195417433 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7666891 69 +   7961872 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84768 60 -     96226 --------CAGAG--CA-C-CTATAAA--TCC-AAG--T-GATT-T-GCTCTC-AAATTGT-A----------------------------A-A-CTGT-TT-C---GT----------A---AAGTAG--------A----------------
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 3
s Saiga_tatarica.SaiTat_scaffold_373180                       3649 66 +      4321 --------GAGA--CTG-C-CCACAGA--TCT-GAA--A-GATT-T-GCCATC-AAATTAC-A----------------------------A-A-CTAC-T-GT---GT----------A---AAGTAG--------A---AC-A--AA----T
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151483 33 -    313613 ----------------------------------------------------C-AAAATGC-A----------------------------A-A-CT---TT-T---GT----------A---CAGCAA--------A---AC-AA-AA----A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 21 C 0
s Semnopithecus_entellus.k141_11662                          14715 69 -     19888 ATGT-TT-C------AA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21917 69 +     39453 ATGT-TT-C------AA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2443 69 +     27826 GTGT-TT-C------AA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             1964 69 -     19483 ATGT-TT-C------AA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTAT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      2026 69 +      7198 ATGT-TT-C------AA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         10286 69 +     15514 ATGT-TT-C------AA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187755 67 -    191337 --------ATGAG--CA-C-CCATAGA--TCC-AAG--A-GATT-T-GTCCTC-AAATTGA-A----------------------------A-A-CTGC-TT-T---GT----------A---AAGTAA--------A---AC-AA-AA----A
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13647133 40 -  18376816 --------c--aaaatt-t-ttacaga--tcc-aaa--a-catt-ttttcctc-aaaaaa----------------------------------------------------------------------------------------------
i Sorex_araneus.JH798187.1                               C 0 I 20
s Spermophilus_dauricus.KZ294078.1                         1948314 60 -   3870691 aagt-tt-a------aa-t-ccAC------CT-AAG--A-GATT-T-GTCCTC-AAATTAT-A----------------------------A-A-CTGTTt--t---gt----------a---aagtaa--------a---ac-----------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 5
s Spilogale_gracilis.SpiGra_flattened_line_13525             27306 66 +     97271 --------TAGAG---A-T-CCATAGA--TCC-AAC--A-GATT-T-GCCCTC-AAGTTAC-A----------------------------A-A-CTCT-TT-T---GT----------A---AAGTAA--------A---AC-AA-AA----A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14292 67 -    196729 --------TAGAG--AA-T-GCATAGA--TCC-AAC--A-GATT-T-GCCCTC-ACACTAC-A----------------------------A-A-CTAT-TT-T---GT----------G---AAGAGG--------A---AC-AA-AA----A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   62882558 61 -  69701581 --------AAGA--CAA-T-CCGTAGA--TCC-AAA--A-GTTT-T-GTTCTc-at------a----------------------------a-a-ct---t-tt---at----------a---aaatgg--------a---ac-aaaaa----t
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1088471 69 -   1523678 atgt-tt-C------CA-T-CCACAGA--TAT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AC-AA----A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6916 67 +     41958 --------CAGAG--CA-T-CCATAGA--GCC-AAG--A-GATT-T-GCCTCC-AAATTAC-A----------------------------A-A-CTGT-T-GG---GT----------A---AAACAG--------A---AC-AA-AA----A
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69559 74 +    116680 GAGT-TTCCAGA-A-CA-T-TCATAGA--TAC-AAG--A-GATT-C-ACCCTC-AAATTGC-A----------------------------A-A-CTCT-T-GT---GG----------A---AAGCCA--------A---GG-GA-AA----A
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115304 67 -    156842 --------CAGTG--CA-T-CCATAGA--TCC-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-TT-C---GT----------A---AAGTAG--------A---AC-AA-AA----A
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383759 67 +    539355 --------CAGA-A-CA-T-CCATAGA--TCC-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-TT-T---GT----------A---AAGTAG--------A---AC-AA-AA----A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10744 69 +     70052 AAGT-TT-C------TA-T-CCATGGA--TCT-AAG--A-GACT-T-GTCTTC-AAGTTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGAGA--------A---AC-AA-AA----A
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               15049 69 +     25099 AAGT-TT-C------TA-T-CCATGGA--TCT-AAG--A-GACT-T-GTCTTC-AAGTTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGAGG--------A---AC-AA-AA----A
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186423290 68 + 186847797 ATGT-TT-C------CA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTA--A----------------------------A-A-CTGT-T--TG--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103280 48 +    114563 AAAT-TT-C------CA-T-CCACAGA--TCT-AAA--A-GATA-T-GTTCTC-AGGTTAC-A----------------------------A-A-CTG--------------------------------------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 181
s Tolypeutes_matacus.TolMat_scaffold_228639                   1948 74 +      8208 GAGT-CTCCAGAG--CA-C-CCATAGA--TCC-AAG--A-GATC-T-GCCCTC-AAATTGC-A----------------------------T-G-CTCT-C-AT---GT----------A---AAGTAG--------A---GG-GA-AA----A
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     79062 61 +    610378 --------CAGAG--TG-T-CCATAGA--TTC-CAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-C-CTAT-T-GA---GT----------A---TTGTAG--------A---A------------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 2
s Trachypithecus_auratus.k141_722599                          6017 69 -     20410 ATGT-TT-C------AA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    10213 69 +     15221 ATGT-TT-C------AA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        6118 69 +     19930 ATGT-TT-C------AA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2548 69 -     19997 ATGT-TT-C------AA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42667 69 -     60166 ATGT-TT-C------AA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        10140 69 -     27529 ATGT-TT-C------AA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     10080 69 -     18194 ATGT-TT-C------AA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3815 69 -     21137 ATGT-TT-C------AA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2518 69 -     10723 ATGT-TT-C------AA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1670 69 +      9834 ATGT-TT-C------AA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        19988 69 +     32220 ATGT-TT-C------AA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5934085 69 +   6242583 ATGT-TT-C------AA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        3332 69 +     20839 ATGT-TT-C------AA-T-CCACAGA--GCT-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-T--TT--GT----------A---AAGTAG--------A---AC-AG-AA----A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    785 45 -      1748 ----------------------------------------GACT-T-TCTGTC-AAATTAG-A----------------------------A-A-CTAT-T-CT---GT----------A---AAGTAG--------A---AC-AA-AA----T
i Tragulus_javanicus.TraJav_scaffold_140459              I 20 C 0
s Tupaia_chinensis.KB320699.1                              2150256 24 +   4065304 -----------------------------------------------------------------------------------------------CTGT-T-GT---GT----------A---AATTAG--------G---AC-CA-AA----A
i Tupaia_chinensis.KB320699.1                            I 36 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     3560 24 -     10553 -----------------------------------------------------------------------------------------------CTCT-T-GT---GT----------A---AATTAG--------A---AC-CA-AA----A
i Tupaia_tana.TupTan_flattened_line_97126                I 36 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737820 67 +  33153633 --------AAGA--CTA-T-CCATAGA--TCC-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-TT-T---GT----------A---AAGTAG--------A---AC-AA-AA----T
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   51623 92 -     77625 --------CAGAG--TT-T-CCATAGA--TAC-AAG--A-G-TT-T-GCCCTC-AAAATGC-AAACAAATGTTTGCCAATAAAAATAAACAA-A-TG---TT-T---AT----------A---CAGCAA--------A---AC-AG-AA----A
i Uropsilus_gracilis.UroGra_scaffold_12083               I 10 C 0
s Ursus_maritimus.KK499267.1                               4847008 67 -   5085361 --------TAGA-A-CA-T-CCATAGA--TCC-AAC--A-GATT-T-GCCCTC-AAGTTAC-A----------------------------A-A-CTCT-TT-T---GT----------A---AACTAG--------A---AC-AA-AA----A
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   7135 69 +     50397 AAGT-TC-C------CA-T-CCATAGA--TCT-AAA--A-GATT-T-TCCCTC-AGATTAC-A----------------------------A-A-CTGT-T--TT--AT----------A---AAGTAG--------G---AC-AA-AA----A
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              7183 69 +     24756 aagT-TC-C------CA-T-CCATAGA--TCT-AAA--A-GATT-T-TCCCTC-AGATTAC-A----------------------------A-A-CTGT-T--TT--AT----------A---AAGTAG--------G---AC-AA-AA----A
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368488 67 -   5488506 --------CAGA--CCA-C-CCATAGA--TCC-AAG--A-GATC-T-GGCCTC-AGATTAC-A----------------------------A-A-CTGT-TT-T---AC----------A---AAAGAG--------G---AC-AA-AA----T
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7478 66 -     43706 --------TA-A-AGCA-T-CTATACA--TGC-AAC--A-GATT-T-GCCCTC-AAGTTAC-A----------------------------A-G-CTAT-TT-T---GT----------A---AAGTAG--------A---A--AA-AA----A
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19810 64 -     24430 AAGT-TT-A------TA-T-CCACATT--TCT-AAG--A-GATT-T-GCCCTC-AAATTAT-A----------------------------C-A-CTGTTC--T---AT----------A---AAGTAA--------A---AC-----------
i Xerus_inauris.XerIna_scaffold_48378                    C 0 I 5
s Zalophus_californianus.ZalCal_flattened_line_63728          1931 66 +      2932 --------TAGAG--CA-T-CCATAGA--TCC-AAC--A-GATT-T-GCCCTC-AAGTTAC-A----------------------------A-A-CTCT-T--T---GT----------A---AAGTAG--------A---AC-AA-AA----A
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      10082 40 +     63895 A--T-TT-C------CA-T-CCATAGA--TGT-AAG--A-GATT-T-GCTCTC-AAATTAT---------------------------------------------------------------------------------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 25
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11512 67 +     12536 --------AAGA--CTA-T-CCATAGA--TCC-AAG--A-GATT-T-GCCCTC-AAATTAC-A----------------------------A-A-CTGT-TT-T---GT----------A---AAGTAG--------A---AC-AA-AA----T
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galagoides_demidoff.k141_31856                              3217  0 -      3432 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1782 1 +     62944 T
s Acinonyx_jubatus.LLWD01001279.1                           823424 1 -   1699592 T
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507140 1 -  29979442 T
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             75360 1 -    347723 T
i Ailurus_fulgens.LNAC01001112.1                         I 18 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     65126 1 -     89534 T
i Allactaga_bullata.AllBul_scaffold_9566                 I 2 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9781 1 -     52922 T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9714 1 -     28001 T
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                           160 1 -     18505 T
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           1009 1 -     12518 T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675319 1 -   2318259 G
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183265 1 +    412891 A
i Anoura_caudifer.AnoCau_scaffold_1412                   I 2 I 1
s Antilocapra_americana.AntAmePen_scaffold_12469             97774 1 -    100397 G
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7424 1 +     20879 A
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 6 C 0
s Arctocebus_calabarensis.k141_288239                        14588 1 +     17124 T
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2621 1 +     43469 A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 2 I 1
s Avahi_laniger.k141_765380                                  49454 1 -     92717 C
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              50079 1 +     85213 C
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191743 1 +  23207421 G
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2209 1 -     18090 G
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26241 1 +     34529 G
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    199283 1 -    288883 G
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20272488 1 +  48749331 G
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1125044 1 -   1948126 G
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18083126 1 +  45695690 G
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2818615 1 +   4408762 G
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9999064 1 -  17673402 T
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331528 1 -   7040546 T
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399804 1 -   1652518 T
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795920 1 -  60362399 T
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181977 1 -    185531 T
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031364 1 -   9314153 t
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955628 1 -  59632846 t
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496929 1 +  63665305 t
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18829437 1 +  46296322 G
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18060157 1 -  44709034 G
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           141198 1 -    496798 a
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                3038 1 -     11696 A
i Carollia_perspicillata.CarPer_scaffold_92756           I 2 I 1
s Castor_canadensis.CasCan_scaffold_2074                    133795 1 +    179628 T
i Castor_canadensis.CasCan_scaffold_2074                 I 2 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89402 1 +    217609 G
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18347798 1 -  23392119 G
i Cavia_aperea.AVPZ01000300.1                            I 184 C 0
s Cavia_porcellus.DS562891.1                              18360058 1 -  23407841 G
i Cavia_porcellus.DS562891.1                             I 197 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98932 1 +    143979 G
i Cavia_tschudii.CavTsc_scaffold_8919                    I 194 C 0
s Cephalopachus_bancanus.k141_2037105                         5114 1 -      8605 A
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12228041 1 +  27778364 T
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2759 1 -      3715 T
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470741 1 +   4669795 T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         9290 1 -     19203 T
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3711 1 +      8260 T
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3939 1 +     27781 T
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         4096 1 -     20310 T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           7081 1 +     29689 T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            1519 1 +      9989 T
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9765 1 -     27936 T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9791 1 -     11289 T
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38812163 1 +  39242232 T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217862 1 -  21565898 T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34977 1 -     53127 T
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        2265 1 +      7159 T
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9784 1 -     27947 T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9760 1 +     17596 T
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         40260 1 -     41420 T
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4961 1 -      6351 C
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       I 12 C 0
s Cheirogaleus_major.k141_333249                             16870 1 -     52598 T
i Cheirogaleus_major.k141_333249                         I 14 C 0
s Cheirogaleus_medius.k141_1055463                           12220 1 +     57038 T
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1251156 1 +   2543920 T
i Chinchilla_lanigera.JH722012.1                         I 2551 C 0
s Chlorocebus_aethiops.ctg25                              18423723 1 -  18827391 T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       10166 1 -     50209 T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135417172 1 + 135778131 T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15325 1 +     19366 T
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170424 1 +    839153 T
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_172426               9798 1 -     10935 T
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          I 11 C 0
s Colobus_angolensis.KN981557.1                            1905698 1 +   2368649 T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199945368 1 + 200372422 T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              32239 1 +     84244 T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17546144 1 -  53390261 T
i Condylura_cristata.JH655891.1                          I 8 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10661 1 -     20389 T
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 1
s Crocidura_indochinensis.CroInd_scaffold_807070               238 1 +      1402 T
i Crocidura_indochinensis.CroInd_scaffold_807070         n 1 I 184
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24367 1 -     87169 T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 3215 1 +      5455 T
i Cuniculus_paca.CunPac_flattened_line_231100            I 229 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1569 1 +      3576 T
i Dasyprocta_punctata.DasPun_flattened_line_206793       I 248 C 0
s Dasypus_novemcinctus.JH564415.1                            61233 1 +   2246927 T
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12533042 1 -  12879189 T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811379 1 +  35494412 G
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8628070 1 +  20541912 A
i Desmodus_rotundus.KZ672289.1                           I 2 I 1
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669577 1 +   1390856 T
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2649 1 +    198055 T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34624 1 +     67921 T
i Dinomys_branickii.DinBra_scaffold_21862                I 214 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31815 1 -     42551 T
i Dolichotis_patagonum.DolPat_scaffold_30833             I 191 C 0
s Eidolon_helvum.KE759718.1                                   7573 1 +     11740 T
i Eidolon_helvum.KE759718.1                              I 3 I 1
s Elaphurus_davidianus.JRFZ01104969.1                       310444 1 +    607251 g
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1089160 1 +  10337057 A
i Elephantulus_edwardii.JH947257.1                       I 4 C 0
s Enhydra_lutris.KZ291758.1                               16325921 1 -  41312741 T
i Enhydra_lutris.KZ291758.1                              C 0 I 4
s Eptesicus_fuscus.JH977646.1                              2144225 1 -  14770903 T
i Eptesicus_fuscus.JH977646.1                            C 0 I 1
s Equus_asinus.JREZ01000139.1                              1279925 1 +   4378816 T
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527746 1 -  39960074 T
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29761 1 +    498745 T
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3325469 1 -   7059049 T
i Erinaceus_europaeus.JH835339.1                         C 0 I 3
s Erythrocebus_patas.Contig38                             21200354 1 -  21539334 T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11055 1 +    133382 G
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24992 1 -     44125 G
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Eulemur_albifrons.k141_342033                               9550 1 -     14127 T
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                2248 1 -     16928 T
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              11281 1 -     25546 T
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             8466 1 +     26330 T
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                  9723 1 +     23973 T
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 8466 1 +     75513 T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  6418 1 +     97555 T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                             9344 1 +     26496 T
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_2367191                                  2361 1 +      2552 T
i Eulemur_rufus.k141_2367191                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                               9529 1 +    111500 T
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20233294 1 + 206538554 T
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20192124 1 + 205367284 T
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  5649 1 -     36744 T
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25611 1 +     26054 T
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30496 1 +     49224 T
i Glis_glis.GliGli_scaffold_19807                        I 2 C 0
s Gorilla_beringei.k141_3596273                              11017 1 -     32273 T
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186333165 1 + 186649187 T
i Gorilla_gorilla.LT578341.1                             I 67 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   30220 1 +     78134 T
i Graphiurus_murinus.GraMur_scaffold_10447               I 14 C 0
s Hapalemur_alaotrensis.k141_170648                           2614 1 -     19426 T
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              7758 1 -     15286 T
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                              9396 1 +     18253 T
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                          9499 1 -     41752 T
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                          9332 1 -     16460 T
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238287 1 +    327341 T
i Helogale_parvula.HelPar_flattened_line_2585            I 26 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17641 1 +     36099 G
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20659721 1 +  22651954 T
i Heterocephalus_glaber.JH602082.1                       I 201 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 405 1 +       961 T
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112192 1 +    128679 G
i Hippopotamus_amphibius.HipAmp_scaffold_9076            I 24 C 0
s Hipposideros_armiger.JXIK01000431.1                       108437 1 +   1711038 T
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 1
s Hipposideros_galeritus.HipGal_scaffold_29171               39878 1 +     43066 T
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 I 1
s Hoolock_leuconedys.ctg274                                    429910 1 +    630532 T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40755 1 +     55795 T
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20187 1 -    143317 T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 201 C 0
s Hylobates_agilis.k141_307679                               12841 1 -     15490 T
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              54846 1 +     67168 T
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189538496 1 - 191637585 T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3331389 1 -  11177569 T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      81282 1 +    135385 T
i Hystrix_cristata.HysCri_scaffold_5660                  I 204 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514741 1 -   7955117 t
i Ictidomys_tridecemlineatus.JH393364.1                  I 5 C 0
s Indri_indri.k141_3655594                                   18315 1 +     31101 T
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22596 1 +     23964 G
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271520 1 -   9596543 c
i Jaculus_jaculus.JH725527.1                             I 2 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1863 1 -      3359 G
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    12635 1 -     42476 T
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 1
s Lemur_catta.scaffold_24                                 15519858 1 -  30322482 T
i Lemur_catta.scaffold_24                                C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3036258 1 +   3914936 T
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             267648 1 -    662738 G
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1432285 1 +   1826925 T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             838 1 +     11245 G
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999674 1 +   6120653 G
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214676 1 -  43346337 t
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951868 1 -  59628241 t
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               2106 1 +     40492 T
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59671361 1 +  60120075 T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7861 1 -     26193 T
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75658 1 -    114318 T
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  1373 1 -     23192 T
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10826 1 -     29190 T
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  19393 1 +     37952 T
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834481 1 + 187317192 T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25453044 1 -  25927173 T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  75242 1 +     89720 T
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 2240 1 +     20474 T
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   2041 1 -     14993 T
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324913 1 -    668171 T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                  344 1 -     24072 T
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               20980 1 -     45290 T
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87682 1 +     94391 T
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 3 I 1
s Mandrillus_leucophaeus.scaffold280                      23932529 1 -  24302211 T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346706 1 +    752769 T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097591 1 -  40650429 t
i Marmota_marmota.CZRN01000018.1                         I 5 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6941 1 -    207569 T
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 1
s Mellivora_capensis.MelCap_flattened_line_69365              6388 1 +     13704 t
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 255
s Mesoplodon_bidens.MesBid_scaffold_108144                    3264 1 +     10310 G
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18283473 1 -  93316391 T
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    15531 1 -    145209 A
i Microgale_talazaci.MicTal_scaffold_6613                I 20 I 3
s Micronycteris_hirsuta.MicHir_scaffold_52381                13581 1 -     19307 A
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 2 I 1
s Miniopterus_natalensis.LDJU01000034.1                    1849256 1 +   8254450 T
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 1
s Miniopterus_schreibersii.MinSch_scaffold_18080             33132 1 +     64694 T
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 1
s Miopithecus_ogouensis.k141_534055                           4279 1 -     28506 T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62588 1 -     63350 T
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      4823 1 -     37649 T
i Mirza_zaza.k141_952172                                 I 15 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26769 1 -    437263 G
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137985 1 -    366855 A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 1
s Moschus_moschiferus.MosMos_scaffold_13123                    495 1 +     82753 G
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31489 1 +     37127 T
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5285 1 +     14753 T
i Murina_feae.MurFea_scaffold_85699                      C 0 I 1
s Muscardinus_avellanarius.MusAve_scaffold_82313              2490 1 +     14296 T
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 2 C 0
s Mustela_putorius.JH418006.1                               297819 1 -  14710649 t
i Mustela_putorius.JH418006.1                            C 0 I 4
s Myotis_brandtii.KE162005.1                                278455 1 -  10118263 t
i Myotis_brandtii.KE162005.1                             C 0 I 1
s Myotis_davidii.KB100139.1                                1586012 1 -   6019432 t
i Myotis_davidii.KB100139.1                              C 0 I 1
s Myotis_lucifugus.GL429869.1                              3902220 1 -   4330536 t
i Myotis_lucifugus.GL429869.1                            C 0 I 1
s Myotis_myotis.MyoMyo_scaffold_28916                        32780 1 +     33610 T
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 I 1
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186271 1 +    196477 C
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025656 1 -   3037898 t
i Nannospalax_galili.KL204047.1                          I 3 I 5
s Nasalis_larvatus.k141_413338                               10279 1 +     21681 T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865725 1 +   7148211 g
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756543 1 +    783361 A
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 1
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146130 1 -   9404916 c
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 1 C 0
s Nycticebus_bengalensis.LG01                            102574642 1 - 196305487 T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2328 1 +      8486 T
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105745069 1 + 199412804 T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355907 1 +   3988456 T
i Ochotona_princeps.JH802162.1                           I 16 C 0
s Odobenus_rosmarus.KB229312.1                              500875 1 -   2017862 T
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         144816 1 +    630418 g
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  2781640 1 -  10937097 G
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               7227 1 -     18566 T
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458883 1 -    559221 t
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17585172 1 +  44047080 G
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173593 1 -    191736 G
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    39135 1 +     80009 T
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189138027 1 + 189151597 T
i Pan_troglodytes.CM009242.2                             I 68 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  147274 1 +    230217 T
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                259983 1 +  18783137 T
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4717130 1 -   8748460 T
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1264526 1 -   2937107 G
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183438314 1 + 183742232 T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             2007 1 +     20448 T
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20558812 1 +  20919399 T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                    750 1 +     41871 T
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     4036 1 +     27711 T
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  4121 1 +      9205 T
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9005 1 -     78924 T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 23 C 0
s Perodicticus_ibeanus.k141_855320                            4824 1 +     13100 T
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             3192 1 +     25941 T
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     26175 1 -     29689 T
i Petromus_typicus.PetTyp_scaffold_42190                 I 188 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8687 1 +     63832 G
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38791 1 +     62158 T
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33513 1 +     89929 T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34929 1 +     51399 T
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14291165 1 -  14605196 T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              605 1 +     22620 T
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 1
s Platanista_gangetica.PlaMin_flattened_line_32310           34393 1 +     35617 G
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189126215 1 + 189387572 T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9565821 1 +   9816681 T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68440 1 -     81375 T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                               261 1 +     19060 T
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 10166 1 -     22811 T
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2592511 1 -   4620579 T
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986525 1 +   2598838 T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          24814 1 +     38485 T
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                              975 1 +      4256 T
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22333 1 +     35766 T
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            516 1 -     24134 T
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24328 1 -     67325 T
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            573 1 -      6182 T
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11378 1 -     21811 A
i Pteronotus_parnellii.KE909381.1                        C 0 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36830 1 +     42204 T
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 4
s Pteropus_alecto.KB030862.1                              22973842 1 +  28871421 T
i Pteropus_alecto.KB030862.1                             I 3 I 1
s Pteropus_vampyrus.KN534172.1                                1779 1 -      8028 T
i Pteropus_vampyrus.KN534172.1                           I 3 I 1
s Puma_concolor.QAVW01001104.1                            20270438 1 -  38429054 T
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             10272 1 -     91421 T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7604400 1 +   7812017 T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10241 1 -     72585 T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5064 1 +     55207 G
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        366982 1 -   3329780 t
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 1
s Rhinopithecus_bieti.k119_217274                             1956 1 -     11128 T
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91231311 1 - 195417433 T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7666960 1 +   7961872 T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84831 1 -     96226 T
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 3 I 1
s Saiga_tatarica.SaiTat_scaffold_373180                       3715 1 +      4321 G
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151516 1 -    313613 C
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          14784 1 -     19888 T
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21986 1 +     39453 T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2512 1 +     27826 T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             2033 1 -     19483 T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      2095 1 +      7198 T
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         10355 1 +     15514 T
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187822 1 -    191337 T
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13647193 1 -  18376816 T
i Sorex_araneus.JH798187.1                               I 20 I 7
s Spermophilus_dauricus.KZ294078.1                         1948379 1 -   3870691 t
i Spermophilus_dauricus.KZ294078.1                       I 5 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27372 1 +     97271 T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14359 1 -    196729 T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   62882619 1 -  69701581 g
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1088540 1 -   1523678 T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6983 1 +     41958 T
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 1
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69633 1 +    116680 T
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115371 1 -    156842 T
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383826 1 +    539355 T
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10813 1 +     70052 T
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               15118 1 +     25099 T
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186423358 1 + 186847797 T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103509 1 +    114563 T
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 181 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   2022 1 +      8208 T
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     79125 1 +    610378 A
i Tonatia_saurophila.TonSau_scaffold_294                 I 2 I 1
s Trachypithecus_auratus.k141_722599                          6086 1 -     20410 T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    10282 1 +     15221 T
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        6187 1 +     19930 T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2617 1 -     19997 T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42736 1 -     60166 T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        10209 1 -     27529 T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     10149 1 -     18194 T
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3884 1 -     21137 T
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2587 1 -     10723 T
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1739 1 +      9834 T
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        20057 1 +     32220 T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5934154 1 +   6242583 T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        3401 1 +     20839 T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    830 1 -      1748 G
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 C 0
s Tupaia_chinensis.KB320699.1                              2150280 1 +   4065304 T
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     3584 1 -     10553 T
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737887 1 +  33153633 G
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   51715 1 -     77625 T
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4847075 1 -   5085361 T
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   7204 1 +     50397 T
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              7252 1 +     24756 T
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368555 1 -   5488506 T
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7544 1 -     43706 C
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19879 1 -     24430 T
i Xerus_inauris.XerIna_scaffold_48378                    I 5 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1997 1 +      2932 T
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      10147 1 +     63895 T
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 25 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11579 1 +     12536 G
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25439 1 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Manis_pentadactyla.KN006162.1                              47139 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              15750 0 +    737560 C
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Lepilemur_septentrionalis.k141_185316                      22934 4 +     54090 I
e Lepilemur_ruficaudatus.k141_582783                           754 56 -      1589 I
e Lepilemur_dorsalis.k141_577674                             24879 4 +     45836 I
e Lepilemur_ankaranensis.k141_596936                          6932 4 -     23766 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galagoides_demidoff.k141_31856                              3217 0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12165 1 +     14536 I
e Dipodomys_ordii.KN672350.1                              18895947 1 +  37912305 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1783 16 +     62944 G--------C------CCCA-C-----GACTCTC---CC
s Acinonyx_jubatus.LLWD01001279.1                           823425 11 -   1699592 G--------C------TCA-TG----gctc---------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 3
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507141 12 -  29979442 G--------C-------CA-TGG----Ctctg-------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             75361 13 -    347723 G--------T------CCA-TGG----CTCTG-------
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     65127 17 -     89534 G--------T------CCC-CA----TTACCCTC---TA
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9782 16 -     52922 G--------C------CCCA-C-----GACTCTC---CC
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9715 16 -     28001 G--------C------CCCA-C-----GACTCTC---CC
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                           161 16 -     18505 G--------C------CCCA-C-----GACTCTC---CC
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           1010 16 -     12518 G--------C------CCCA-C-----GACTCTC---CC
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675320 14 -   2318259 G--------C------CCA-TG-A---CC---ct---ct
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183267 14 +    412891 A--------C------CCA-TG-A---CT---CT---CC
i Anoura_caudifer.AnoCau_scaffold_1412                   I 1 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97775 14 -    100397 G--------C------CCA-TG-A---TC---CT---GT
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7425 15 +     20879 G--------G------CCC-TG----TGGCCCTC-----
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14589 17 +     17124 G--------C------TCCT-A----TAGCTCTT---CC
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2623 14 +     43469 A--------C------CCA-TG-A---CT---CT---CT
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 1 C 0
s Avahi_laniger.k141_765380                                  49455 17 -     92717 G--------T------TCCT-A----CAACTCTT---CC
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              50080 17 +     85213 G--------T------TCCT-A----CAACTCTT---CC
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191744 14 +  23207421 T--------C------CCA-TG-A---CC---ct---cc
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2210 14 -     18090 T--------C------CCA-TG-A---CC---ct---cc
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26242 14 +     34529 G--------C------CCA-TG-A---CC---CT---CT
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    199284 14 -    288883 G--------C------CCA-TG-A---CC---ct---ct
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20272489 14 +  48749331 G--------C------CCA-TG-A---CC---ct---ct
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1125045 14 -   1948126 G--------C------CCA-TG-A---CC---ct---ct
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18083127 14 +  45695690 G--------C------CCA-TG-A---CC---ct---ct
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2818616 14 +   4408762 G--------C------CCA-TG-A---CC---ct---ct
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9999065 22 -  17673402 AAGGGGGGCT------CCA-TG-A---CC---Ac---cc
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331529 22 -   7040546 AAGGGGGGCT------CCA-TG-A---CC---Ac---cc
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399805 22 -   1652518 AAGGGGGGCT------CCA-TG-A---CC---Ac---cc
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795921 13 -  60362399 G--------T------CCC-TGG----CTCTG-------
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181978 13 -    185531 G--------T------CCC-TGG----CTCTG-------
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031365 13 -   9314153 g--------t------ccc-tg----gctctg-------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955629 13 -  59632846 g--------t------ccc-tg----gctctg-------
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496930 13 +  63665305 g--------t------ccc-tg----gctctg-------
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18829438 14 +  46296322 G--------C------CCA-TG-A---CC---ct---ct
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18060158 14 -  44709034 G--------C------CCA-TG-A---CC---ct---ct
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           141199 17 -    496798 g--------t------CCCT-T----TGGTTCac---cc
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                3040 14 -     11696 A--------C------CCA-TG-A---CT---CT---CC
i Carollia_perspicillata.CarPer_scaffold_92756           I 1 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133796 18 +    179628 A--------C------CTC-TAG----TGCCCTC--TGC
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89403 14 +    217609 A--------T------GCA-TA-A---CT---CT---CC
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18347799 17 -  23392119 G--------T------CTC-TA----TGACCCTC---CC
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18360059 17 -  23407841 G--------T------CTC-TA----TGACCCTC---CC
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98933 17 +    143979 G--------T------CTC-TA----TGACCCTT---CC
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         5115 17 -      8605 G--------T------CCCT-T----TGGCTCAT---CC
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12228042 13 +  27778364 G--------C-----CCTA-TG----accct--------
i Ceratotherium_simum.JH767749.1                         C 0 I 2
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2760 13 -      3715 G--------C-----CCTA-TG-A---CCCT--------
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 I 2
s Cercocebus_atys.KQ010504.1                               4470742 16 +   4669795 G--------C------CCCA-C-----GACTctc---cc
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         9291 16 -     19203 G--------C------CCCA-C-----GACTCTC---CC
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3712 16 +      8260 G--------C------CCCA-C-----GACTCTC---CC
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3940 16 +     27781 G--------C------CCCA-C-----GACTCTC---CC
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         4097 17 -     20310 G-------CC------CCCA-C-----GACTCTC---CC
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           7082 16 +     29689 G--------C------CCCA-C-----GACTCTC---CC
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            1520 16 +      9989 G--------C------CCCA-C-----GACTCTC---CC
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9766 16 -     27936 G--------C------CCCA-C-----GACTCTC---CC
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9792 16 -     11289 G--------C------CCCA-C-----GACTCTC---CC
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38812164 16 +  39242232 G--------C------CCCA-T-----GACTCTC---CC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217863 16 -  21565898 G--------C------CCCA-C-----GACTCTC---CC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34978 16 -     53127 G--------C------CCCA-C-----GACTCTC---CC
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        2266 17 +      7159 G-------CC------CCCA-C-----GACTCTC---CC
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9785 16 -     27947 G--------C------CCCA-C-----GACTCTC---CC
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9761 16 +     17596 G--------C------CCCA-C-----GACTCTC---CC
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         40261 16 -     41420 G--------C------CCCA-C-----GACTCTC---CC
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4962 17 -      6351 G--------C------TCC-AGG----GACCCTC---CC
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16871 17 -     52598 G--------C------TCCT-A----CAACTCTT---CC
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12221 17 +     57038 G--------C------TCCT-A----CAACTCTT---CC
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1251157 17 +   2543920 G--------C------CTG-TA----TGACCCTT---CT
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18423724 16 -  18827391 G--------C------CCCA-C-----GACTCTC---CC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       10167 16 -     50209 G--------C------CCCA-C-----GACTCTC---CC
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135417173 16 + 135778131 G--------C------CCCA-C-----GACTCtc---cc
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15326 17 +     19366 G--------C------TCC-AA----TGACCCTC---CC
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170425 17 +    839153 G--------C------TCC-AA----TGACCCtc---cc
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_172426               9799 17 -     10935 A--------C------CCC-TA-A---GATCCTC---CC
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          C 0 C 0
s Colobus_angolensis.KN981557.1                            1905699 16 +   2368649 G--------C------CCCA-C-----GACTCtc---cc
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199945369 16 + 200372422 G--------C------CCCA-C-----GACTCTC---CC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              32240 16 +     84244 G--------C------CCCA-C-----GACTCTC---CC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17546145 15 -  53390261 G--------C------CCC-ATGA-AC--TT------CC
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10663 14 -     20389 T--------C------CCA-TG-A---CT---TT---CC
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 1 C 0
s Crocidura_indochinensis.CroInd_scaffold_109268              7721 27 +      9948 A--------CAAAATATCA-TG-ACAT--CTCCCCGCCC
i Crocidura_indochinensis.CroInd_scaffold_109268         I 1 I 363
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24368 13 -     87169 G--------C------TCA-TGG----CTCTT-------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 3216 17 +      5455 G--------C------TTC-TA----TGACCCTA---CC
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1570 17 +      3576 G--------C------CTC-TA----TGACCCTT---CC
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            61234 17 +   2246927 G--------C------TCC-AGG----GACCCTC---CC
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12533043 17 -  12879189 G--------A------TCCT-A----CAACTCTT---CC
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811380 14 +  35494412 T--------C------CCA-TG-A---CC---tt---cc
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8628072 14 +  20541912 A--------C------CCA-TG-A---CT---Ct---cc
i Desmodus_rotundus.KZ672289.1                           I 1 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669578 13 +   1390856 G--------C-----CCTA-tg----accct--------
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 2
s Diceros_bicornis.DicBicMic_scaffold_5955                    2650 13 +    198055 G--------C-----CCTA-TG-A---CCCT--------
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 2
s Dinomys_branickii.DinBra_scaffold_21862                    34625 17 +     67921 G--------C------CTT-GA----TGACCCTT---CT
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18895948 12 +  37912305 ---------------------A----TGG-CCTC-TCCA
i Dipodomys_ordii.KN672350.1                             I 1 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  12166 12 +     14536 ---------------------A----TGG-CCTC-TCCA
i Dipodomys_stephensi.DipSte_scaffold_75855              I 1 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31816 17 -     42551 G--------T------CTC-TA----TGACCCTT---CC
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE759718.1                                   7575 14 +     11740 C--------C------CCA-TG-A---CT---Ct---cc
i Eidolon_helvum.KE759718.1                              I 1 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310445 14 +    607251 g--------c------CCA-TG-A---CC---ct---ct
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1089161 17 +  10337057 G--------C------CTC-CA----TGATTTTT---CC
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16325926 13 -  41312741 G--------C------CCA-TGG----CTctg-------
i Enhydra_lutris.KZ291758.1                              I 4 C 0
s Eptesicus_fuscus.JH977646.1                              2144227 14 -  14770903 C--------C------CCA-TG-A---ct---ct---cc
i Eptesicus_fuscus.JH977646.1                            I 1 C 0
s Equus_asinus.JREZ01000139.1                              1279926 13 +   4378816 G--------C-----CCCA-TG-A---CCCT--------
i Equus_asinus.JREZ01000139.1                            C 0 I 5
s Equus_caballus.CM000403.2                               18527747 13 -  39960074 G--------C-----CCCA-TG-A---Ccct--------
i Equus_caballus.CM000403.2                              C 0 I 5
s Equus_przewalskii.KK951119.1                               29762 13 +    498745 G--------C-----CCCA-TG-A---Ccct--------
i Equus_przewalskii.KK951119.1                           C 0 I 5
s Erinaceus_europaeus.JH835339.1                           3325473  3 -   7059049 ------------------------------TC------A
i Erinaceus_europaeus.JH835339.1                         I 3 C 0
s Erythrocebus_patas.Contig38                             21200355 16 -  21539334 G--------C------CCCA-C-----GACTCTC---CC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11056 14 +    133382 T--------C------CCA-TG-A---CC---CT---CC
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             24993 14 -     44125 T--------C------CCA-TG-A---CC---CT---CC
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Eulemur_albifrons.k141_342033                               9551 17 -     14127 G--------C------TCCT-A----CAACTCTT---CC
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                2249 17 -     16928 G--------C------TCCT-A----CAACTCTT---CC
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              11282 17 -     25546 G--------C------TCCT-A----CAACTCTT---CC
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             8467 17 +     26330 G--------C------TCCT-A----CAACTCTT---CC
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                  9724 17 +     23973 G--------C------TCCT-A----CAACTCTT---CC
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 8467 17 +     75513 G--------C------TCCT-A----CAACTCTT---CC
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  6419 17 +     97555 G--------C------TCCT-A----CAACTCTT---CC
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                             9345 17 +     26496 G--------C------TCCT-A----CAACTCTT---CC
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_2367191                                  2362 17 +      2552 G--------C------TCCT-A----CAACTCTT---CC
i Eulemur_rufus.k141_2367191                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                               9530 17 +    111500 G--------C------TCCT-A----CAACTCTT---CC
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20233295 11 + 206538554 G--------C------TCA-TG----gctc---------
i Felis_catus.CM001381.2                                 C 0 I 3
s Felis_catus_fca126.CM031415.1                           20192125 11 + 205367284 G--------C------TCA-TG----gctc---------
i Felis_catus_fca126.CM031415.1                          C 0 I 3
s Felis_nigripes.FelNig_flattened_line_20823                  5650 11 -     36744 G--------C------TCA-TGG----CTC---------
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 3
s Galeopterus_variegatus.GalVar_scaffold_56069               25612 16 +     26054 G--------C------CCC--A----TGACCCTC---CC
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30497 17 +     49224 G--------C------CTC-TG----TGACCCTC---CC
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              11018 16 -     32273 G--------C------CCCA-C-----GACTCTC---CC
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186333166 16 + 186649187 G--------C------CCCA-C-----GACTCTC---cc
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   30221 17 +     78134 G--------C------CTC-TG----TGACCCTC---CT
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           2615 17 -     19426 G--------C------TCCT-A----CAACTCTT---CC
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              7759 17 -     15286 G--------C------TCCT-A----CAACTCTT---CC
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                              9397 17 +     18253 G--------C------TCCT-A----CAACTCTT---CC
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                          9500 17 -     41752 G--------C------TCCT-A----CAACTCTT---CC
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                          9333 17 -     16460 G--------C------TCCT-A----CAACTCTT---CC
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238288 13 +    327341 G--------C------TCA-TGG----ATCTT-------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17642 14 +     36099 G--------C------CCA-TG-A---CC---CT---CT
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20659722 16 +  22651954 G--------C-------TC-TA----TGACCCTT---CC
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 406 17 +       961 G--------C------CCC-AG----TGAACCTC---CC
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112193 14 +    128679 T--------C------CCA-TG-A---CA---CT---CC
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108439 14 +   1711038 C--------C------CTG-TG-A---Ct---ct---ct
i Hipposideros_armiger.JXIK01000431.1                    I 1 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39880 14 +     43066 C--------C------CCG-TG-A---CT---CT---CC
i Hipposideros_galeritus.HipGal_scaffold_29171           I 1 C 0
s Hoolock_leuconedys.ctg274                                    429911 16 +    630532 G--------C------CCCA-T-----GACTCTC---AC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40756 13 +     55795 G--------C------TCA-TGG----CTCTT-------
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20188 17 -    143317 G--------T------CTC-TA----TGACCCTT---CC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_307679                               12842 16 -     15490 G--------C------CCCA-T-----GACTCTC---CC
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              54847 16 +     67168 G--------C------CCCA-T-----GACTCTC---CC
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189538497 16 - 191637585 G--------C------CCCA-T-----GACTCTC---CC
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3331390 16 -  11177569 G--------C------CCCA-T-----GACTCTC---CC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      81283 17 +    135385 G--------C------CAC-CA----TGAGTCTT---CC
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514742 16 -   7955117 g--------c------cCC--A----TGAccctt---cc
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   18316 17 +     31101 G--------C------TCCT-A----CAACTCTT---CC
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22597 14 +     23964 T--------C------CCA-TG-A---CC---TT---CC
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271521 17 -   9596543 a--------t------CCC-TA----TTACCCTC---TG
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1864  8 -      3359 ---------------------g----ggc---tt---cc
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    12637 14 -     42476 C--------C------CCA-TG-A---CT---CT---CC
i Lasiurus_borealis.LasBor_scaffold_32767                I 1 C 0
s Lemur_catta.scaffold_24                                 15519859 17 -  30322482 G--------C------TCCT-A----CAACTCTT---CC
i Lemur_catta.scaffold_24                                C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3036259 13 +   3914936 G--------C------CCA-CGG----ctctg-------
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             267649 14 -    662738 T--------C------CCA-TG-A---Cc---tt---cc
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1432286 16 +   1826925 G--------C------CCCA-C-----GACTCTC---CC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             839 17 +     11245 G--------C------TCCT-A----CAGTTATT---TC
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999675 17 +   6120653 G--------C------TCCT-A----CAGTTATT---TC
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214677 17 -  43346337 g--------c------TCC-TA----TGACCCTC---CC
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951869 13 -  59628241 g--------t------ccC-TGG----Ctctg-------
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               2107 16 +     40492 G--------C------CCCA-C-----GACTCTC---CC
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59671362 16 +  60120075 G--------C------CCCA-C-----GACTCTC---CC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7862 16 -     26193 G--------C------CCCA-C-----GACTCTC---CC
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75659 16 -    114318 G--------C------CCCA-C-----GACTCTC---CC
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  1374 16 -     23192 G--------C------CCCA-C-----GACTCTC---TC
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10827 16 -     29190 G--------C------CCCA-C-----GACTCTC---CC
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  19394 16 +     37952 G--------C------CCCA-C-----GACTCTC---CC
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834482 16 + 187317192 G--------C------CCCA-C-----GACTCtc---cc
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25453045 16 -  25927173 G--------C------CCCA-C-----GACTCtc---cc
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  75243 16 +     89720 G--------C------CCCA-C-----GACTCTC---CC
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 2241 16 +     20474 G--------C------CCCA-C-----GACTCTC---CC
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   2042 16 -     14993 G--------C------CCCA-C-----GACTCTC---CC
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324914 16 -    668171 G--------C------CCCA-C-----AACTCTC---CC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                  345 16 -     24072 G--------C------CCCA-C-----GACTCTC---CC
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               20981 16 -     45290 G--------C------CCCA-C-----GACTCTC---CC
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87684 14 +     94391 C--------C------CCA-CG-A---CT---CT---CA
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 1 C 0
s Mandrillus_leucophaeus.scaffold280                      23932530 16 -  24302211 G--------C------CCCA-C-----GACTCTC---CC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346707 16 +    752769 G--------C------CCCA-C-----GACTCTC---CC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15750  9 +    737560 ------------------a-tg----actctt-------
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              47139  9 -    317179 ------------------a-tg----actctt-------
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097592 16 -  40650429 g--------c------cCC--A----TGAccctt---cc
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6943 14 -    207569 T--------A------CCA-CA-A---CT---CT---TC
i Megaderma_lyra.MegLyr_scaffold_4542                    I 1 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6644 13 +     13704 G--------C------CCA-TGG----CTCTG-------
i Mellivora_capensis.MelCap_flattened_line_69365         I 255 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3265 14 +     10310 T--------C------CCA-TG-A---CC---TT---CC
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18283474 17 -  93316391 G--------C------TCCT-A----CAACTCtt---cc
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    15535  8 -    145209 ----------------------------TCCTTC---CC
i Microgale_talazaci.MicTal_scaffold_6613                I 3 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13583 14 -     19307 A--------C------CCA-TG-A---CT---CT---CC
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 1 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849258 14 +   8254450 C--------C------CTA-TG-A---CT---ct---cc
i Miniopterus_natalensis.LDJU01000034.1                  I 1 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             33134 14 +     64694 C--------C------CTA-TG-A---CT---CT---CC
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 1 C 0
s Miopithecus_ogouensis.k141_534055                           4280 16 -     28506 G--------C------CCCA-C-----GACTCTC---CC
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62589 13 -     63350 G--------C------CCA-CAG----CTCTG-------
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      4824 17 -     37649 G--------T------TCCT-A----CAACTCTT---CC
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26770 14 -    437263 T--------C------CCA-TG-A---CC---TT---CC
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 137987 14 -    366855 A--------C------CCA-TGG----CT---CT---CC
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 1 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                    496 14 +     82753 G--------C------CCA-TG-A---CC---CG---CT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31490 13 +     37127 G--------C------TCA-TGG----ATTTT-------
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5287 14 +     14753 C--------C------CCA-TG----CCT---CT---GC
i Murina_feae.MurFea_scaffold_85699                      I 1 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2491 17 +     14296 G--------C------CTC-TG----CGACCCTC---TC
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               297824 13 -  14710649 g--------c------cCA-TGG----Ctctg-------
i Mustela_putorius.JH418006.1                            I 4 C 0
s Myotis_brandtii.KE162005.1                                278457 14 -  10118263 c--------C------CCA-TG-A---Ct---ct---cc
i Myotis_brandtii.KE162005.1                             I 1 C 0
s Myotis_davidii.KB100139.1                                1586014 14 -   6019432 c--------C------CCA-TG-A---Ct---ct---cc
i Myotis_davidii.KB100139.1                              I 1 C 0
s Myotis_lucifugus.GL429869.1                              3902222 14 -   4330536 c--------C------CCA-TG-A---CT---ct---cc
i Myotis_lucifugus.GL429869.1                            I 1 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32782 14 +     33610 C--------C------CCA-TG-A---CT---CT---CC
i Myotis_myotis.MyoMyo_scaffold_28916                    I 1 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186272 17 +    196477 G--------C------TTC-AG----CGATCCTC---CG
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025662  9 -   3037898 ---------------------------GACCCTC---Tg
i Nannospalax_galili.KL204047.1                          I 5 I 1
s Nasalis_larvatus.k141_413338                               10280 16 +     21681 G--------C------CCCA-C-----GACTCTC---CC
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865726 14 +   7148211 t--------c------cCA-TG-A---CC---tt---cc
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756545 14 +    783361 A--------C------CCA-TGG----CC---CT---CC
i Noctilio_leporinus.NocLep_scaffold_251                 I 1 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146131 13 -   9404916 g--------T------CCC-TGG----CTctg-------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102574643 17 - 196305487 G--------C------TCCT-A----CAGCTCTT---CC
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2329 17 +      8486 G--------C------TCCT-A----CAGCTCTT---CC
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105745070 17 + 199412804 G--------C------TCCT-A----CAGCTCTT---CC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355908 17 +   3988456 T--------T------CCC-AA----TGGCCCtt---cc
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              500876 13 -   2017862 G--------C------CCA-Tg----gctttg-------
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         144817 14 +    630418 g--------c------CCA-TG-A---CC---ct---ct
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  2781641 14 -  10937097 T--------C------CCA-TG-A---CC---tt---cc
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               7228 17 -     18566 G--------T------CCC-TA----CCACCCTC---CC
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458884 13 -    559221 g--------c------ccc-tg----gctctg-------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17585173 14 +  44047080 G--------C------CCA-TG-A---CC---ct---ct
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173594 14 -    191736 G--------C------CCA-TG-A---CC---CT---CT
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    39136 16 +     80009 G--------C------CCCA-C-----GACTCTC---cc
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189138028 16 + 189151597 G--------C------CCCA-C-----GACTCTc---cc
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  147275 11 +    230217 G--------C------TCA-TGG----CTC---------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 3
s Panthera_pardus.KV860321.1                                259984 11 +  18783137 G--------C------TCA-TG----gctc---------
i Panthera_pardus.KV860321.1                             C 0 I 3
s Panthera_tigris.KE722367.1                               4717131 11 -   8748460 G--------C------TCA-TG----gctc---------
i Panthera_tigris.KE722367.1                             C 0 I 3
s Pantholops_hodgsonii.KE114653.1                          1264527 14 -   2937107 G--------C------CCA-TG-A---CC---ct---ct
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183438315 16 + 183742232 G--------C------CCCA-C-----GACTCtc---cc
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             2008 16 +     20448 G--------C------CCCA-C-----GACTCTC---CC
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20558813 16 +  20919399 G--------C------CCCA-C-----GACTCTC---CC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                    751 16 +     41871 G--------C------CCCA-C-----GACTCTC---CC
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     4037 16 +     27711 G--------C------CCCA-C-----GACTCTC---CC
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  4122 16 +      9205 G--------C------CCCA-C-----GACTCTC---CC
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9006 13 -     78924 G--------C------TCA-TGG----CTCTC-------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            4825 17 +     13100 G--------C------TCCT-A----CAGCTCTT---CC
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             3193 17 +     25941 A--------C------TCCT-A----CAGCTCTT---CC
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25440 12 +     32600 ---------------------A----TGT-CCTC-TCCA
i Perognathus_longimembris.PerPac_flattened_line_34437   I 1 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     26176 17 -     29689 G--------C------CTC-AA----TGACCCTC---CC
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8688 14 +     63832 T--------C------CCA-TG-A---CC---TT---CC
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38792 16 +     62158 G--------C------CCCA-C-----GACTCTC---CC
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33514 16 +     89929 G--------C------CCCA-C-----GACTCTC---CC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34930 16 +     51399 G--------C------CCCA-C-----GACTCTC---CC
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14291166 16 -  14605196 G--------C------CCCA-C-----GACTCtc---cc
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              607 14 +     22620 C--------C------CCC-TG-A---CT---CT---CC
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 1 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34394 14 +     35617 T--------C------CCA-TG-A---CC---TT---CC
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189126216 16 + 189387572 G--------C------CCCA-C-----GACTCTC---CC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9565822 16 +   9816681 G--------C------CCCA-C-----GACTCTC---CC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68441 16 -     81375 G--------C------CCCA-C-----GACTCTC---CC
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                               262 16 +     19060 G--------C------CCCA-C-----GACTCTC---CC
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 10167  3 -     22811 G--------C------C----------------------
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 I 2
s Prolemur_simus.MPIZ01000396.1                            2592512 17 -   4620579 G--------C------TCCT-A----CAACTCTt---cc
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986526 17 +   2598838 G--------C------TCCT-A----CAACTctt---cc
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          24815 17 +     38485 G--------C------TCCT-A----CAACTCTT---CC
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                              976 17 +      4256 G--------C------TCCT-A----CAGCTCTT---CC
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22334 17 +     35766 G--------C------TCCT-A----CAACTCTT---CC
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            517 17 -     24134 G--------C------TCCT-A----CAACTCTT---CC
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24329 17 -     67325 G--------C------TCCT-A----CAACTCTT---CC
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            574 17 -      6182 G--------C------TCCT-A----CAACTCTT---CC
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11380 14 -     21811 A--------C------CCA-TG-A---CT---Ct---cc
i Pteronotus_parnellii.KE909381.1                        I 1 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36835 13 +     42204 G--------C------CCA-TGG----CTCTG-------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 4 C 0
s Pteropus_alecto.KB030862.1                              22973844 14 +  28871421 T--------C------CCA-TG-A---CT---CT---CC
i Pteropus_alecto.KB030862.1                             I 1 C 0
s Pteropus_vampyrus.KN534172.1                                1781 14 -      8028 C--------C------CCA-TG-A---CT---CT---CC
i Pteropus_vampyrus.KN534172.1                           I 1 C 0
s Puma_concolor.QAVW01001104.1                            20270439 11 -  38429054 G--------C------TCA-TG----gctc---------
i Puma_concolor.QAVW01001104.1                           C 0 I 3
s Pygathrix_cinerea.k141_1153803                             10273 16 -     91421 G--------C------CCCA-C-----GACTCTC---CC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7604401 16 +   7812017 G--------C------CCCA-C-----GACTCTC---CC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10242 16 -     72585 G--------C------CCCA-C-----GACTCTC---CC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5065 14 +     55207 G--------C------CCA-TG-A---CC---CT---CT
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        366984 14 -   3329780 c--------c------tca-TG-A---CT---TT---cc
i Rhinolophus_sinicus.LVEH01000134.1                     I 1 C 0
s Rhinopithecus_bieti.k119_217274                             1957 16 -     11128 G--------C------CCCA-C-----GACTCTC---CC
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91231312 16 - 195417433 G--------C------CCCA-C-----GACTCtc---cc
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7666961 16 +   7961872 G--------C------CCCA-C-----GACTCTC---CC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84833 14 -     96226 C--------C------TCA-TG-A---CT---CT---CC
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 1 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3716 14 +      4321 G--------C------CCA-TG-A---CC---CT---CT
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151517 15 -    313613 G--------C------CCC-CCAA-AC--CT------CC
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          14785 16 -     19888 G--------C------CCCA-C-----GACTCTC---CC
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      21987 16 +     39453 G--------C------CCCA-C-----GACTCTC---CC
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2513 16 +     27826 G--------C------CCCA-C-----GACTCTC---CC
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             2034 16 -     19483 G--------C------CCCA-T-----GACTCTC---CC
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      2096 16 +      7198 G--------C------CCCA-C-----GACTCTC---CC
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         10356 16 +     15514 G--------C------CCCA-C-----GACTCTC---CC
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187823 15 -    191337 A--------T------CCA-TG----C--CTCCC---CC
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13647201  5 -  18376816 -------------------------------TGC---CC
i Sorex_araneus.JH798187.1                               I 7 C 0
s Spermophilus_dauricus.KZ294078.1                         1948380 16 -   3870691 g--------c------cCC--G----TGACCCTC---CC
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27373 13 +     97271 G--------C------CAA-TGG----CTCTG-------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14360 13 -    196729 G--------C------TCA-TGG----ATCTT-------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   62882620 14 -  69701581 a--------T------TCA-TA-A---CT---ct---cc
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1088541 16 -   1523678 G--------C------CCCA-T-----GACTCTC---CC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6985 14 +     41958 C--------C------CCA-TG-A---CC---CT---CC
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 1 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69634 17 +    116680 G--------T------TTC-AG----CGATCCTC---CA
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115372 13 -    156842 G--------C-----CCCA-TG-A---CCCT--------
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 2
s Tapirus_terrestris.TapTer_scaffold_755                    383827 13 +    539355 G--------C-----CGCA-TG-A---CCCT--------
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 2
s Tarsius_lariang.k141_2201908                               10814 17 +     70052 G--------T------CCCT-T----TGGCTCAC---CC
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               15119 17 +     25099 G--------T------CCCT-T----TGGCTCAC---CC
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186423359 16 + 186847797 G--------C------CCCA-C-----GACTCtc---cc
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103510 17 +    114563 G--------C------CTC-CA----TGACTCTT---CC
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   2023 17 +      8208 G--------C------TCC-AGG----GACCCTC---CC
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     79127 14 +    610378 A--------C------CCA-TG-A---CT---CT---CC
i Tonatia_saurophila.TonSau_scaffold_294                 I 1 C 0
s Trachypithecus_auratus.k141_722599                          6087 16 -     20410 G--------C------CCCA-C-----GACTCTC---CC
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    10283 16 +     15221 G--------C------CCCA-C-----GACTCTC---CC
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        6188 16 +     19930 G--------C------CCCA-C-----GACTCTC---CC
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2618 16 -     19997 G--------C------CCCA-C-----GACTCTC---CC
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42737 16 -     60166 G--------C------CCCA-C-----GACTCTC---CC
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        10210 16 -     27529 G--------C------CCCA-C-----GACTCTC---CC
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     10150 16 -     18194 G--------C------CCCA-C-----GACTCTC---CC
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3885 16 -     21137 G--------C------CCCA-C-----GACTCTC---CC
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2588 16 -     10723 G--------C------CCCA-C-----GACTCTC---CC
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1740 16 +      9834 G--------C------CCCA-C-----GACTCTC---CC
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        20058 16 +     32220 G--------C------CCCA-C-----GACTCTC---CC
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5934155 16 +   6242583 G--------C------CCCA-C-----GACTCTC---CC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        3402 16 +     20839 G--------C------CCCA-C-----GACTCTC---CC
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    831 14 -      1748 G--------C------CCA-TG-A---CC---CT---CT
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 C 0
s Tupaia_chinensis.KB320699.1                              2150281 17 +   4065304 A--------C------GCC-TG----TGACcctc---cc
i Tupaia_chinensis.KB320699.1                            C 0 I 280
s Tupaia_tana.TupTan_flattened_line_97126                     3585 17 -     10553 A--------C------CCC-TA----TGGCTCTC---CC
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 281
s Tursiops_truncatus.MRVK01000835.1                       15737888 14 +  33153633 T--------C------CCA-TG-A---CC---tt---cc
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   51716 15 -     77625 G--------C------CCT-CTGA-AC--CT------CC
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 2
s Ursus_maritimus.KK499267.1                               4847076 13 -   5085361 G--------C------CCA-Tg----gctctg-------
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   7205 17 +     50397 G--------C------TCCT-A----CAACTCTT---CC
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              7253 17 +     24756 G--------C------TCCT-A----CAACTCTT---CC
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368556 22 -   5488506 AAGGAGGGCT------CCA-TG-A---CC---Ac---cc
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7545 13 -     43706 G--------T------CCC-TGG----CTCTG-------
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19880 17 -     24430 G--------T------CCC-AA----TGACCCTC---CC
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          1998 13 +      2932 G--------C------CCA-TGG----CTCTG-------
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      10148 17 +     63895 G--------T------CCC-CT----TTAACCTC---TG
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11580 14 +     12536 T--------C------CCA-TG-A---CC---TT---CC
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lepilemur_septentrionalis.k141_185316                      22934  4 +     54090 I
e Lepilemur_ruficaudatus.k141_582783                           754 56 -      1589 I
e Lepilemur_dorsalis.k141_577674                             24879  4 +     45836 I
e Lepilemur_ankaranensis.k141_596936                          6932  4 -     23766 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galagoides_demidoff.k141_31856                              3217  0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1799 2 +     62944 T-A
s Allactaga_bullata.AllBul_scaffold_9566                     65144 3 -     89534 TCA
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9798 2 -     52922 T-T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9731 2 -     28001 T-T
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                           177 2 -     18505 T-T
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           1026 2 -     12518 T-T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675334 2 -   2318259 c-t
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183281 2 +    412891 C-T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 2
s Antilocapra_americana.AntAmePen_scaffold_12469             97789 2 -    100397 C-T
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7440 1 +     20879 T--
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2637 2 +     43469 C-T
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 2
s Avahi_laniger.k141_765380                                  49472 2 -     92717 T-A
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              50097 2 +     85213 T-A
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191758 2 +  23207421 c-t
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2224 2 -     18090 c-t
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26256 2 +     34529 C-T
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    199298 2 -    288883 c-t
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20272503 2 +  48749331 c-t
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1125059 2 -   1948126 c-t
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18083141 2 +  45695690 c-t
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2818630 2 +   4408762 c-t
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9999087 2 -  17673402 c-t
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331551 2 -   7040546 c-t
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399827 2 -   1652518 c-t
i Camelus_ferus.KB017975.1                               C 0 C 0
s Capra_aegagrus.CM003241.1                               18829452 2 +  46296322 c-t
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18060172 2 -  44709034 c-t
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           141216 2 -    496798 t-a
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                3054 2 -     11696 C-T
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 2
s Castor_canadensis.CasCan_scaffold_2074                    133814 2 +    179628 A-A
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89417 2 +    217609 C-T
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18347816 2 -  23392119 T-A
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18360076 2 -  23407841 T-A
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98950 2 +    143979 T-A
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         5132 2 -      8605 T-A
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470758 2 +   4669795 t-t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         9307 2 -     19203 T-T
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3728 2 +      8260 T-T
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3956 2 +     27781 T-T
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         4114 2 -     20310 T-T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           7098 2 +     29689 T-T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            1536 2 +      9989 T-T
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9782 2 -     27936 T-T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9808 2 -     11289 T-T
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38812180 2 +  39242232 T-T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217879 2 -  21565898 T-T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34994 2 -     53127 T-T
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        2283 2 +      7159 T-T
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9801 2 -     27947 T-T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9777 2 +     17596 T-T
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         40277 2 -     41420 T-T
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4979 2 -      6351 T-A
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16888 2 -     52598 T-A
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12238 2 +     57038 T-A
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1251174 2 +   2543920 G-A
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18423740 2 -  18827391 T-T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       10183 2 -     50209 T-T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135417189 2 + 135778131 t-t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15343 2 +     19366 T-A
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170442 2 +    839153 t-a
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_172426               9816 2 -     10935 T-A
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          C 0 C 0
s Colobus_angolensis.KN981557.1                            1905715 2 +   2368649 t-t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199945385 2 + 200372422 T-T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              32256 2 +     84244 T-T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17546160 2 -  53390261 C-T
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10677 2 -     20389 C-T
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 2
s Crocidura_indochinensis.CroInd_scaffold_287352               541 1 +      4208 C--
i Crocidura_indochinensis.CroInd_scaffold_287352         I 126 I 143
s Cuniculus_paca.CunPac_flattened_line_231100                 3233 2 +      5455 T-A
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1587 2 +      3576 T-A
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            61251 2 +   2246927 T-G
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12533060 2 -  12879189 T-A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811394 2 +  35494412 c-t
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8628086 2 +  20541912 c-t
i Desmodus_rotundus.KZ672289.1                           C 0 I 2
s Dinomys_branickii.DinBra_scaffold_21862                    34642 2 +     67921 G-A
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18895960 2 +  37912305 T-A
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  12178 2 +     14536 T-A
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31833 2 -     42551 T-A
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE759718.1                                   7589 2 +     11740 c-t
i Eidolon_helvum.KE759718.1                              C 0 I 2
s Elaphurus_davidianus.JRFZ01104969.1                       310459 2 +    607251 c-t
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1089178 2 +  10337057 A-A
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144241 2 -  14770903 c-t
i Eptesicus_fuscus.JH977646.1                            C 0 I 2
s Erinaceus_europaeus.JH835339.1                           3325476 1 -   7059049 C--
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21200371 2 -  21539334 T-T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11070 2 +    133382 C-T
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             25007 2 -     44125 C-T
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Eulemur_albifrons.k141_342033                               9568 2 -     14127 T-A
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                2266 2 -     16928 T-A
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              11299 2 -     25546 T-A
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             8484 2 +     26330 T-A
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                  9741 2 +     23973 T-A
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 8484 2 +     75513 T-A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  6436 2 +     97555 T-A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                             9362 2 +     26496 T-A
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_2367191                                  2379 2 +      2552 T-A
i Eulemur_rufus.k141_2367191                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                               9547 2 +    111500 T-A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25628 2 +     26054 T-A
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30514 2 +     49224 T-A
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              11034 2 -     32273 T-A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186333182 2 + 186649187 t-a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   30238 2 +     78134 T-A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           2632 2 -     19426 T-A
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              7776 2 -     15286 T-A
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                              9414 2 +     18253 T-A
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                          9517 2 -     41752 T-A
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                          9350 2 -     16460 T-A
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17656 2 +     36099 C-T
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20659738 2 +  22651954 T-A
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 423 2 +       961 T-A
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112207 2 +    128679 C-T
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108453 2 +   1711038 c-t
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 2
s Hipposideros_galeritus.HipGal_scaffold_29171               39894 2 +     43066 C-T
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 I 2
s Hoolock_leuconedys.ctg274                                    429927 2 +    630532 T-A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20205 2 -    143317 T-G
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_307679                               12858 2 -     15490 T-A
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              54863 2 +     67168 T-A
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189538513 2 - 191637585 T-A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3331406 2 -  11177569 T-A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      81300 2 +    135385 T-A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514758 1 -   7955117 t--
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   18333 2 +     31101 T-A
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22611 2 +     23964 C-T
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271538 3 -   9596543 TCG
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1872 2 -      3359 c-t
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    12651 2 -     42476 C-T
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 2
s Lemur_catta.scaffold_24                                 15519876 2 -  30322482 T-A
i Lemur_catta.scaffold_24                                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             267663 2 -    662738 c-t
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1432302 2 +   1826925 T-T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             856 2 +     11245 T-A
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999692 2 +   6120653 T-A
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214694 2 -  43346337 T-A
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Macaca_arctoides.k141_2326796                               2123 2 +     40492 T-T
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59671378 2 +  60120075 T-T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7878 2 -     26193 T-T
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75675 2 -    114318 T-T
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  1390 2 -     23192 T-T
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10843 2 -     29190 T-T
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  19410 2 +     37952 T-T
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834498 2 + 187317192 t-t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25453061 2 -  25927173 t-t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  75259 2 +     89720 T-T
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 2257 2 +     20474 T-T
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   2058 2 -     14993 T-T
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324930 2 -    668171 T-T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                  361 2 -     24072 T-T
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               20997 2 -     45290 T-T
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87698 2 +     94391 C-T
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 2
s Mandrillus_leucophaeus.scaffold280                      23932546 2 -  24302211 T-T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346723 2 +    752769 T-T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097608 1 -  40650429 t--
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6957 2 -    207569 C-T
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 2
s Mesoplodon_bidens.MesBid_scaffold_108144                    3279 2 +     10310 C-T
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18283491 2 -  93316391 t-a
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    15543 2 -    145209 T-A
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13597 2 -     19307 C-T
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 2
s Miniopterus_natalensis.LDJU01000034.1                    1849272 2 +   8254450 t-t
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 2
s Miniopterus_schreibersii.MinSch_scaffold_18080             33148 2 +     64694 T-T
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 2
s Miopithecus_ogouensis.k141_534055                           4296 2 -     28506 T-T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirza_zaza.k141_952172                                      4841 2 -     37649 T-A
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26784 2 -    437263 C-T
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138001 2 -    366855 C-T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 2
s Moschus_moschiferus.MosMos_scaffold_13123                    510 2 +     82753 C-T
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5301 2 +     14753 C-T
i Murina_feae.MurFea_scaffold_85699                      C 0 I 2
s Muscardinus_avellanarius.MusAve_scaffold_82313              2508 2 +     14296 T-A
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Myotis_brandtii.KE162005.1                                278471 2 -  10118263 c-t
i Myotis_brandtii.KE162005.1                             C 0 I 2
s Myotis_davidii.KB100139.1                                1586028 2 -   6019432 c-t
i Myotis_davidii.KB100139.1                              C 0 I 2
s Myotis_lucifugus.GL429869.1                              3902236 2 -   4330536 c-t
i Myotis_lucifugus.GL429869.1                            C 0 I 2
s Myotis_myotis.MyoMyo_scaffold_28916                        32796 2 +     33610 C-T
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 I 2
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186289 2 +    196477 T-A
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025672 2 -   3037898 a-a
i Nannospalax_galili.KL204047.1                          I 1 C 0
s Nasalis_larvatus.k141_413338                               10296 2 +     21681 T-T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865740 2 +   7148211 c-t
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756559 2 +    783361 C-T
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 2
s Nycticebus_bengalensis.LG01                            102574660 2 - 196305487 T-A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2346 2 +      8486 T-A
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105745087 2 + 199412804 T-A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355925 2 +   3988456 t-a
i Ochotona_princeps.JH802162.1                           C 0 I 7
s Odocoileus_virginianus.KZ100018.1                         144831 2 +    630418 c-t
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  2781655 2 -  10937097 c-t
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               7245 2 -     18566 T-A
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Ovis_aries.CM001607.2                                   17585187 2 +  44047080 c-t
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173608 2 -    191736 C-T
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    39152 2 +     80009 t-a
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189138044 2 + 189151597 t-a
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1264541 2 -   2937107 c-t
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183438331 2 + 183742232 t-t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             2024 2 +     20448 T-T
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20558829 2 +  20919399 T-T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                    767 2 +     41871 T-T
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     4053 2 +     27711 T-T
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  4138 2 +      9205 T-T
i Papio_ursinus.k141_3428135                             C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25452 2 +     32600 T-A
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 I 1
s Petromus_typicus.PetTyp_scaffold_42190                     26193 2 -     29689 T-A
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8702 2 +     63832 C-T
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38808 2 +     62158 T-T
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33530 2 +     89929 T-T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34946 2 +     51399 T-T
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14291182 2 -  14605196 t-t
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              621 2 +     22620 C-T
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 2
s Platanista_gangetica.PlaMin_flattened_line_32310           34408 2 +     35617 C-T
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189126232 2 + 189387572 t-a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9565838 2 +   9816681 T-A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68457 2 -     81375 T-T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                               278 2 +     19060 T-T
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 10172 2 -     22811 T-A
i Procavia_capensis.ProCapCap_scaffold_85530             I 2 C 0
s Prolemur_simus.MPIZ01000396.1                            2592529 2 -   4620579 t-a
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986543 2 +   2598838 t-a
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          24832 2 +     38485 T-A
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                              993 2 +      4256 T-T
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22351 2 +     35766 T-A
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            534 2 -     24134 T-G
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24346 2 -     67325 T-A
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            591 2 -      6182 T-A
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11394 2 -     21811 c-t
i Pteronotus_parnellii.KE909381.1                        C 0 I 2
s Pteropus_alecto.KB030862.1                              22973858 2 +  28871421 C-T
i Pteropus_alecto.KB030862.1                             C 0 I 2
s Pteropus_vampyrus.KN534172.1                                1795 2 -      8028 C-T
i Pteropus_vampyrus.KN534172.1                           C 0 I 2
s Pygathrix_cinerea.k141_1153803                             10289 2 -     91421 T-T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7604417 2 +   7812017 T-T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10258 2 -     72585 T-T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5079 2 +     55207 C-T
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        366998 2 -   3329780 g-t
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 2
s Rhinopithecus_bieti.k119_217274                             1973 2 -     11128 T-T
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91231328 2 - 195417433 t-t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7666977 2 +   7961872 T-T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84847 2 -     96226 C-T
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 2
s Saiga_tatarica.SaiTat_scaffold_373180                       3730 2 +      4321 C-T
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151532 2 -    313613 C-T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          14801 2 -     19888 T-T
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      22003 2 +     39453 T-T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2529 2 +     27826 T-T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             2050 2 -     19483 T-T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      2112 2 +      7198 T-T
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         10372 2 +     15514 T-T
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187838 2 -    191337 C-G
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13647206 2 -  18376816 C-C
i Sorex_araneus.JH798187.1                               C 0 I 149
s Spermophilus_dauricus.KZ294078.1                         1948396 1 -   3870691 T--
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Sus_scrofa.CM000828.4                                   62882634 2 -  69701581 c-c
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1088557 2 -   1523678 T-A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 6999 2 +     41958 C-T
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 2
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69651 2 +    116680 T-A
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tarsius_lariang.k141_2201908                               10831 2 +     70052 T-A
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               15136 2 +     25099 T-A
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186423375 2 + 186847797 t-t
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103527 2 +    114563 C-A
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   2040 2 +      8208 T-A
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     79141 2 +    610378 C-T
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 3
s Trachypithecus_auratus.k141_722599                          6103 2 -     20410 T-T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    10299 2 +     15221 T-T
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        6204 2 +     19930 T-T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2634 2 -     19997 T-T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42753 2 -     60166 T-T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        10226 2 -     27529 T-T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     10166 2 -     18194 T-T
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3901 2 -     21137 T-T
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2604 2 -     10723 T-T
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1756 2 +      9834 T-T
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        20074 2 +     32220 T-T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5934171 2 +   6242583 T-T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        3418 2 +     20839 T-T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    845 2 -      1748 C-T
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 C 0
s Tupaia_chinensis.KB320699.1                              2150578 2 +   4065304 t-t
i Tupaia_chinensis.KB320699.1                            I 280 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     3883 2 -     10553 T-T
i Tupaia_tana.TupTan_flattened_line_97126                I 281 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737902 2 +  33153633 c-t
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_97021                    2100 2 -      4736 T-T
i Uropsilus_gracilis.UroGra_scaffold_97021               I 81 I 3
s Varecia_rubra.k141_590885                                   7222 2 +     50397 T-A
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              7270 2 +     24756 T-A
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368578 2 -   5488506 c-t
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19897 1 -     24430 T--
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      10165 3 +     63895 TCA
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11594 2 +     12536 C-T
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Perodicticus_potto.k141_1092580                             3210 0 +     25941 C
e Perodicticus_ibeanus.k141_855320                            4842 0 +     13100 C
e Zalophus_californianus.ZalCal_flattened_line_63728          2011 0 +      2932 C
e Vulpes_lagopus.VulLag_flattened_line_30954                  7558 0 -     43706 C
e Ursus_maritimus.KK499267.1                               4847089 0 -   5085361 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tapirus_terrestris.TapTer_scaffold_755                    383840 2 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      115385 2 -    156842 I
e Suricata_suricatta.SurSur_flattened_line_6629              14373 0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             27386 0 +     97271 C
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Puma_concolor.QAVW01001104.1                            20270450 3 -  38429054 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         36848 0 +     42204 C
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9019 0 -     78924 C
e Panthera_tigris.KE722367.1                               4717142 3 -   8748460 I
e Panthera_pardus.KV860321.1                                259995 3 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  147286 3 +    230217 I
e Otocyon_megalotis.JAEUCK010005147.1                       458897 0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odobenus_rosmarus.KB229312.1                              500889 0 -   2017862 C
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Nyctereutes_procyonoides.CAJHUB010000658.1               9146144 0 -   9404916 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               297837 0 -  14710649 C
e Mungos_mungo.MunMun_flattened_line_23663                   31503 0 +     37127 C
e Mirounga_angustirostris.MirAng_flattened_line_22144        62602 0 -     63350 C
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365              6657 0 +     13704 C
e Manis_pentadactyla.KN006162.1                              47148 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              15759 0 +    737560 C
e Lycaon_pictus.CM007581.1                                17951882 0 -  59628241 C
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3036272 0 +   3914936 C
e Lepilemur_septentrionalis.k141_185316                      22934 4 +     54090 I
e Lepilemur_ruficaudatus.k141_582783                           754 56 -      1589 I
e Lepilemur_dorsalis.k141_577674                             24879 4 +     45836 I
e Lepilemur_ankaranensis.k141_596936                          6932 4 -     23766 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  40769 0 +     55795 C
e Helogale_parvula.HelPar_flattened_line_2585               238301 0 +    327341 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galagoides_demidoff.k141_31856                              3217 0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  5661 3 -     36744 I
e Felis_catus_fca126.CM031415.1                           20192136 3 + 205367284 I
e Equus_przewalskii.KK951119.1                               29775 5 +    498745 I
e Equus_caballus.CM000403.2                               18527760 5 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1279939 5 +   4378816 I
e Enhydra_lutris.KZ291758.1                               16325939 0 -  41312741 C
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    2663 2 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  669591 2 +   1390856 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             24381 0 -     87169 C
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2773 2 -      3715 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Canis_lupus_orion.HG994398.1                            18496943 0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17955642 0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9031378 0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    181991 0 -    185531 C
e CanFam4.chr16                                           17795934 0 -  60362399 C
e Arctocebus_calabarensis.k141_288239                        14606 0 +     17124 C
e Ailurus_fulgens.LNAC01001112.1                             75374 0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9507153 0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           823436 3 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1801 2 +     62944 CA
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507153 1 -  29979442 c-
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 4
s Ailurus_fulgens.LNAC01001112.1                             75374 1 -    347723 c-
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 4
s Allactaga_bullata.AllBul_scaffold_9566                     65147 1 -     89534 A-
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9800 2 -     52922 CA
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9733 2 -     28001 CA
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                           179 2 -     18505 CA
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           1028 2 -     12518 CA
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675336 1 -   2318259 a-
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 6
s Antilocapra_americana.AntAmePen_scaffold_12469             97791 1 -    100397 A-
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 I 6
s Aplodontia_rufa.AprRuf_scaffold_68852                       7441 1 +     20879 G-
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Avahi_laniger.k141_765380                                  49474 2 -     92717 AA
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              50099 2 +     85213 AA
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191760 1 +  23207421 a-
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 6
s Balaenoptera_bonaerensis.DF707048.1                         2226 1 -     18090 a-
i Balaenoptera_bonaerensis.DF707048.1                    C 0 I 6
s Beatragus_hunteri.BeaHun_scaffold_50177                    26258 1 +     34529 A-
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 6
s Bison_bison.KN261452.1                                    199300 1 -    288883 a-
i Bison_bison.KN261452.1                                 C 0 I 6
s Bos_indicus.CM003047.1                                  20272505 1 +  48749331 a-
i Bos_indicus.CM003047.1                                 C 0 I 6
s Bos_mutus.JH880303.1                                     1125061 1 -   1948126 a-
i Bos_mutus.JH880303.1                                   C 0 I 6
s Bos_taurus.CM000203.6                                   18083143 1 +  45695690 a-
i Bos_taurus.CM000203.6                                  C 0 I 6
s Bubalus_bubalis.KI419123.1                               2818632 1 +   4408762 a-
i Bubalus_bubalis.KI419123.1                             C 0 I 6
s Camelus_bactrianus.KN276810.1                            9999089 1 -  17673402 a-
i Camelus_bactrianus.KN276810.1                          C 0 I 6
s Camelus_dromedarius.KN272107.1                           2331553 1 -   7040546 a-
i Camelus_dromedarius.KN272107.1                         C 0 I 6
s Camelus_ferus.KB017975.1                                  399829 1 -   1652518 a-
i Camelus_ferus.KB017975.1                               C 0 I 6
s CanFam4.chr16                                           17795934 1 -  60362399 C-
i CanFam4.chr16                                          C 0 I 4
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181991 1 -    185531 C-
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 I 4
s Canis_lupus_dingo.QKWQ01000480.1                         9031378 1 -   9314153 c-
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 4
s Canis_lupus_familiaris.chr16                            17955642 1 -  59632846 c-
i Canis_lupus_familiaris.chr16                           C 0 I 4
s Canis_lupus_orion.HG994398.1                            18496943 1 +  63665305 c-
i Canis_lupus_orion.HG994398.1                           C 0 I 4
s Capra_aegagrus.CM003241.1                               18829454 1 +  46296322 a-
i Capra_aegagrus.CM003241.1                              C 0 I 6
s Capra_hircus.CM004588.1                                 18060174 1 -  44709034 a-
i Capra_hircus.CM004588.1                                C 0 I 6
s Carlito_syrichta.NW_007259797.1                           141218 2 -    496798 aa
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133816 1 +    179628 A-
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89419 1 +    217609 A-
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 6
s Cavia_aperea.AVPZ01000300.1                             18347818 1 -  23392119 G-
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18360078 1 -  23407841 G-
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98952 1 +    143979 G-
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         5134 2 -      8605 AA
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470760 2 +   4669795 ca
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         9309 2 -     19203 CA
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3730 2 +      8260 CA
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3958 2 +     27781 CA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         4116 2 -     20310 CA
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           7100 2 +     29689 CA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            1538 2 +      9989 CA
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9784 2 -     27936 CA
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9810 2 -     11289 CA
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38812182 2 +  39242232 CA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217881 2 -  21565898 CA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       34996 2 -     53127 CA
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        2285 2 +      7159 CA
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9803 2 -     27947 CA
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9779 2 +     17596 CA
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         40279 2 -     41420 CA
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4981 1 -      6351 G-
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16890 2 -     52598 AG
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12240 2 +     57038 AG
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1251176 1 +   2543920 A-
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18423742 2 -  18827391 CA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       10185 2 -     50209 CA
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135417191 2 + 135778131 ca
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15345 1 +     19366 A-
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170444 1 +    839153 a-
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_172426               9818 1 -     10935 A-
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          C 0 C 0
s Colobus_angolensis.KN981557.1                            1905717 2 +   2368649 ca
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199945387 2 + 200372422 CA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              32258 2 +     84244 CA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17546162 1 -  53390261 A-
i Condylura_cristata.JH655891.1                          C 0 I 3
s Crocidura_indochinensis.CroInd_scaffold_287352               685 1 +      4208 A-
i Crocidura_indochinensis.CroInd_scaffold_287352         I 143 I 7
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24381 1 -     87169 C-
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 4
s Cuniculus_paca.CunPac_flattened_line_231100                 3235 1 +      5455 A-
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1589 1 +      3576 A-
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            61253 1 +   2246927 A-
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12533062 2 -  12879189 AA
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811396 1 +  35494412 a-
i Delphinapterus_leucas.KZ290073.1                       C 0 I 6
s Dinomys_branickii.DinBra_scaffold_21862                    34644 1 +     67921 A-
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18895962 1 +  37912305 G-
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  12180 1 +     14536 G-
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31835 1 -     42551 A-
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310461 1 +    607251 a-
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 6
s Elephantulus_edwardii.JH947257.1                         1089180 1 +  10337057 A-
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16325939 1 -  41312741 c-
i Enhydra_lutris.KZ291758.1                              C 0 I 4
s Erinaceus_europaeus.JH835339.1                           3325477 1 -   7059049 A-
i Erinaceus_europaeus.JH835339.1                         C 0 I 7
s Erythrocebus_patas.Contig38                             21200373 2 -  21539334 CA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11072 1 +    133382 A-
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 6
s Eubalaena_japonica.EubJap_flattened_line_31514             25009 1 -     44125 A-
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 I 6
s Eulemur_albifrons.k141_342033                               9570 2 -     14127 AA
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                2268 2 -     16928 AA
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              11301 2 -     25546 AA
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             8486 2 +     26330 AA
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                  9743 2 +     23973 AA
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 8486 2 +     75513 AA
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  6438 2 +     97555 AA
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                             9364 2 +     26496 AA
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_2367191                                  2381 2 +      2552 AA
i Eulemur_rufus.k141_2367191                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                               9549 2 +    111500 AA
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25630 1 +     26054 A-
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30516 1 +     49224 G-
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              11036 2 -     32273 CA
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186333184 2 + 186649187 ca
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   30240 1 +     78134 G-
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           2634 2 -     19426 AA
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              7778 2 -     15286 AA
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                              9416 2 +     18253 AA
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                          9519 2 -     41752 AA
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                          9352 2 -     16460 AA
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238301 1 +    327341 C-
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 4
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17658 1 +     36099 A-
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 I 6
s Heterocephalus_glaber.JH602082.1                        20659740 1 +  22651954 A-
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 425 1 +       961 A-
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112209 1 +    128679 A-
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 I 6
s Hoolock_leuconedys.ctg274                                    429929 2 +    630532 CA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40769 1 +     55795 C-
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 4
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20207 1 -    143317 A-
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_307679                               12860 2 -     15490 CA
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              54865 2 +     67168 CA
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189538515 2 - 191637585 CA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3331408 2 -  11177569 CA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      81302 1 +    135385 A-
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514759 1 -   7955117 g-
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   18335 2 +     31101 AA
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22613 1 +     23964 A-
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 I 6
s Jaculus_jaculus.JH725527.1                               8271541 1 -   9596543 A-
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1874 1 -      3359 a-
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 I 2
s Lemur_catta.scaffold_24                                 15519878 2 -  30322482 AA
i Lemur_catta.scaffold_24                                C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3036272 1 +   3914936 c-
i Leptonychotes_weddellii.KB714746.1                     C 0 I 4
s Lipotes_vexillifer.KE559953.1                             267665 1 -    662738 a-
i Lipotes_vexillifer.KE559953.1                          C 0 I 6
s Lophocebus_aterrimus.ctg367                              1432304 2 +   1826925 CA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             858 2 +     11245 AA
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999694 2 +   6120653 AA
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214696 1 -  43346337 A-
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951882 1 -  59628241 c-
i Lycaon_pictus.CM007581.1                               C 0 I 4
s Macaca_arctoides.k141_2326796                               2125 2 +     40492 CA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59671380 2 +  60120075 CA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7880 2 -     26193 CA
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75677 2 -    114318 CA
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  1392 2 -     23192 CA
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10845 2 -     29190 CA
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  19412 2 +     37952 CA
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834500 2 + 187317192 ca
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25453063 2 -  25927173 ca
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  75261 2 +     89720 CA
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 2259 2 +     20474 CA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   2060 2 -     14993 CA
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324932 2 -    668171 CA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                  363 2 -     24072 CA
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               20999 2 -     45290 CA
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23932548 2 -  24302211 CA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346725 2 +    752769 CA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15759 1 +    737560 c-
i Manis_javanica.JSZB01003497.1                          C 0 I 4
s Manis_pentadactyla.KN006162.1                              47148 1 -    317179 c-
i Manis_pentadactyla.KN006162.1                          C 0 I 4
s Marmota_marmota.CZRN01000018.1                          33097609 1 -  40650429 g-
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6657 1 +     13704 C-
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 4
s Mesoplodon_bidens.MesBid_scaffold_108144                    3281 1 +     10310 A-
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 I 6
s Microcebus_murinus.CM007674.1                           18283493 2 -  93316391 ca
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    15545 1 -    145209 C-
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Miopithecus_ogouensis.k141_534055                           4298 2 -     28506 CA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62602 1 -     63350 C-
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 I 4
s Mirza_zaza.k141_952172                                      4843 2 -     37649 CA
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26786 1 -    437263 A-
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 6
s Moschus_moschiferus.MosMos_scaffold_13123                    512 1 +     82753 A-
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 6
s Mungos_mungo.MunMun_flattened_line_23663                   31503 1 +     37127 C-
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 4
s Muscardinus_avellanarius.MusAve_scaffold_82313              2510 1 +     14296 G-
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               297837 1 -  14710649 c-
i Mustela_putorius.JH418006.1                            C 0 I 4
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186291 1 +    196477 A-
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025674 1 -   3037898 g-
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               10298 2 +     21681 CA
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865742 1 +   7148211 a-
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 6
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146144 1 -   9404916 c-
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 4
s Nycticebus_bengalensis.LG01                            102574662 2 - 196305487 AA
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2348 2 +      8486 AA
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105745089 2 + 199412804 AA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                              500889 1 -   2017862 c-
i Odobenus_rosmarus.KB229312.1                           C 0 I 4
s Odocoileus_virginianus.KZ100018.1                         144833 1 +    630418 a-
i Odocoileus_virginianus.KZ100018.1                      C 0 I 6
s Orcinus_orca.KB316932.1                                  2781657 1 -  10937097 a-
i Orcinus_orca.KB316932.1                                C 0 I 6
s Orycteropus_afer.OryAfe_flattened_line_144387               7247 1 -     18566 A-
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458897 1 -    559221 c-
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 4
s Ovis_aries.CM001607.2                                   17585189 1 +  44047080 a-
i Ovis_aries.CM001607.2                                  C 0 I 6
s Ovis_canadensis.OviCan_scaffold_2572                      173610 1 -    191736 A-
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 I 6
s Pan_paniscus.KQ411613.1                                    39154 2 +     80009 ca
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189138046 2 + 189151597 ca
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1264543 1 -   2937107 a-
i Pantholops_hodgsonii.KE114653.1                        C 0 I 6
s Papio_anubis.CM001495.2                                183438333 2 + 183742232 ca
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             2026 2 +     20448 CA
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20558831 2 +  20919399 CA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                    769 2 +     41871 CA
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     4055 2 +     27711 CA
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  4140 2 +      9205 CA
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9019 1 -     78924 G-
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 4
s Perognathus_longimembris.PerPac_flattened_line_34437       25455 1 +     32600 A-
i Perognathus_longimembris.PerPac_flattened_line_34437   I 1 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     26195 1 -     29689 A-
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8704 1 +     63832 A-
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 6
s Piliocolobus_badius.k141_1234363                           38810 2 +     62158 CA
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33532 2 +     89929 CA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34948 2 +     51399 CA
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14291184 2 -  14605196 ca
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34410 1 +     35617 A-
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 I 6
s Pongo_abelii.CM009266.2                                189126234 2 + 189387572 ca
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9565840 2 +   9816681 CA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68459 2 -     81375 CA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                               280 2 +     19060 CA
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 10174 1 -     22811 A-
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2592531 2 -   4620579 aa
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986545 2 +   2598838 aa
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          24834 2 +     38485 AA
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                              995 2 +      4256 AA
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22353 2 +     35766 AA
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            536 2 -     24134 AA
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24348 2 -     67325 AA
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            593 2 -      6182 AA
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36848 1 +     42204 C-
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 4
s Pygathrix_cinerea.k141_1153803                             10291 2 -     91421 CA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7604419 2 +   7812017 CA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10260 2 -     72585 CA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5081 1 +     55207 A-
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 6
s Rhinopithecus_bieti.k119_217274                             1975 2 -     11128 CA
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91231330 2 - 195417433 ca
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7666979 2 +   7961872 CA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3732 1 +      4321 A-
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 I 6
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151534 1 -    313613 A-
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 3
s Semnopithecus_entellus.k141_11662                          14803 2 -     19888 CA
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      22005 2 +     39453 CA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2531 2 +     27826 CA
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             2052 2 -     19483 CA
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      2114 2 +      7198 CA
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         10374 2 +     15514 CA
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187840 1 -    191337 A-
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 I 7
s Sorex_araneus.JH798187.1                                13647357 1 -  18376816 a-
i Sorex_araneus.JH798187.1                               I 149 I 32
s Spermophilus_dauricus.KZ294078.1                         1948397 1 -   3870691 G-
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27386 1 +     97271 C-
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 4
s Suricata_suricatta.SurSur_flattened_line_6629              14373 1 -    196729 C-
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 4
s Sus_scrofa.CM000828.4                                   62882636 1 -  69701581 a-
i Sus_scrofa.CM000828.4                                  C 0 I 6
s Symphalangus_syndactylus.tarseq_199                      1088559 2 -   1523678 CA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69653 1 +    116680 A-
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tarsius_lariang.k141_2201908                               10833 2 +     70052 AA
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               15138 2 +     25099 AA
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186423377 2 + 186847797 ca
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103529 1 +    114563 A-
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   2042 1 +      8208 G-
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Trachypithecus_auratus.k141_722599                          6105 2 -     20410 CA
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    10301 2 +     15221 CA
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        6206 2 +     19930 CA
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2636 2 -     19997 CA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42755 2 -     60166 CA
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        10228 2 -     27529 CA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     10168 2 -     18194 CA
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3903 2 -     21137 CA
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2606 2 -     10723 CA
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1758 2 +      9834 CA
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        20076 2 +     32220 CA
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5934173 2 +   6242583 CA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        3420 2 +     20839 CA
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    847 1 -      1748 A-
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 I 6
s Tupaia_chinensis.KB320699.1                              2150580 1 +   4065304 t-
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     3885 1 -     10553 T-
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737904 1 +  33153633 a-
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 6
s Uropsilus_gracilis.UroGra_scaffold_12083                   51733 1 -     77625 A-
i Uropsilus_gracilis.UroGra_scaffold_12083               I 2 I 14
s Ursus_maritimus.KK499267.1                               4847089 1 -   5085361 c-
i Ursus_maritimus.KK499267.1                             C 0 I 4
s Varecia_rubra.k141_590885                                   7224 2 +     50397 AA
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              7272 2 +     24756 AA
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368580 1 -   5488506 a-
i Vicugna_pacos.KN270157.1                               C 0 I 6
s Vulpes_lagopus.VulLag_flattened_line_30954                  7558 1 -     43706 C-
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 4
s Xerus_inauris.XerIna_scaffold_48378                        19898 1 -     24430 G-
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          2011 1 +      2932 C-
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 I 4
s Zapus_hudsonius.ZapHud_scaffold_11398                      10168 1 +     63895 A-
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11596 1 +     12536 A-
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 I 6
e Perodicticus_potto.k141_1092580                             3210 0 +     25941 C
e Perodicticus_ibeanus.k141_855320                            4842 0 +     13100 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tonatia_saurophila.TonSau_scaffold_294                     79143 3 +    610378 I
e Tapirus_terrestris.TapTer_scaffold_755                    383840 2 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      115385 2 -    156842 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                 7001 2 +     41958 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                84849 2 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        367000 2 -   3329780 I
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Puma_concolor.QAVW01001104.1                            20270450 3 -  38429054 I
e Pteropus_vampyrus.KN534172.1                                1797 2 -      8028 I
e Pteropus_alecto.KB030862.1                              22973860 2 +  28871421 I
e Pteronotus_parnellii.KE909381.1                            11396 2 -     21811 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              623 2 +     22620 I
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Panthera_tigris.KE722367.1                               4717142 3 -   8748460 I
e Panthera_pardus.KV860321.1                                259995 3 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  147286 3 +    230217 I
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1355927 7 +   3988456 I
e Noctilio_leporinus.NocLep_scaffold_251                    756561 2 +    783361 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myotis_myotis.MyoMyo_scaffold_28916                        32798 2 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902238 2 -   4330536 I
e Myotis_davidii.KB100139.1                                1586030 2 -   6019432 I
e Myotis_brandtii.KE162005.1                                278473 2 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5303 2 +     14753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 138003 2 -    366855 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             33150 2 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1849274 2 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                13599 2 -     19307 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                         6959 2 -    207569 I
e Macroglossus_sobrinus.MacSob_scaffold_8222                 87700 2 +     94391 I
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Lepilemur_septentrionalis.k141_185316                      22934 4 +     54090 I
e Lepilemur_ruficaudatus.k141_582783                           754 56 -      1589 I
e Lepilemur_dorsalis.k141_577674                             24879 4 +     45836 I
e Lepilemur_ankaranensis.k141_596936                          6932 4 -     23766 I
e Lasiurus_borealis.LasBor_scaffold_32767                    12653 2 -     42476 I
e Hipposideros_galeritus.HipGal_scaffold_29171               39896 2 +     43066 I
e Hipposideros_armiger.JXIK01000431.1                       108455 2 +   1711038 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galagoides_demidoff.k141_31856                              3217 0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  5661 3 -     36744 I
e Felis_catus_fca126.CM031415.1                           20192136 3 + 205367284 I
e Equus_przewalskii.KK951119.1                               29775 5 +    498745 I
e Equus_caballus.CM000403.2                               18527760 5 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1279939 5 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2144243 2 -  14770903 I
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Eidolon_helvum.KE759718.1                                   7591 2 +     11740 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    2663 2 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  669591 2 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8628088 2 +  20541912 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          10679 2 -     20389 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2773 2 -      3715 I
e Carollia_perspicillata.CarPer_scaffold_92756                3056 2 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  2639 2 +     43469 I
e Arctocebus_calabarensis.k141_288239                        14606 0 +     17124 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183283 2 +    412891 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           823436 3 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1803 2 +     62944 T-T
s Acinonyx_jubatus.LLWD01001279.1                           823439 2 -   1699592 t-t
i Acinonyx_jubatus.LLWD01001279.1                        I 3 I 1
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507158 2 -  29979442 t-t
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 4 I 1
s Ailurus_fulgens.LNAC01001112.1                             75379 2 -    347723 t-t
i Ailurus_fulgens.LNAC01001112.1                         I 4 I 1
s Allactaga_bullata.AllBul_scaffold_9566                     65148 2 -     89534 T-T
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 1
s Allenopithecus_nigroviridis.k141_3361533                    9802 2 -     52922 T-T
i Allenopithecus_nigroviridis.k141_3361533               C 0 I 1
s Allochrocebus_lhoesti.k141_4309873                          9735 2 -     28001 T-T
i Allochrocebus_lhoesti.k141_4309873                     C 0 I 1
s Allochrocebus_preussi.k141_1442296                           181 2 -     18505 T-T
i Allochrocebus_preussi.k141_1442296                     C 0 I 1
s Allochrocebus_solatus.k141_166128                           1030 2 -     12518 T-T
i Allochrocebus_solatus.k141_166128                      C 0 I 1
s Ammotragus_lervia.NIVO01071767.1                          675343 1 -   2318259 t--
i Ammotragus_lervia.NIVO01071767.1                       I 6 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183285 2 +    412891 T-T
i Anoura_caudifer.AnoCau_scaffold_1412                   I 2 I 1
s Antilocapra_americana.AntAmePen_scaffold_12469             97798 1 -    100397 T--
i Antilocapra_americana.AntAmePen_scaffold_12469         I 6 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7442 2 +     20879 T-T
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 1
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2641 2 +     43469 T-T
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 2 I 1
s Avahi_laniger.k141_765380                                  49476 2 -     92717 T-T
i Avahi_laniger.k141_765380                              C 0 I 3
s Avahi_peyrierasi.k141_1424874                              50101 2 +     85213 T-T
i Avahi_peyrierasi.k141_1424874                          C 0 I 3
s Balaenoptera_acutorostrata.KI537508.1                   15191767 1 +  23207421 t--
i Balaenoptera_acutorostrata.KI537508.1                  I 6 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2233 1 -     18090 t--
i Balaenoptera_bonaerensis.DF707048.1                    I 6 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26265 1 +     34529 T--
i Beatragus_hunteri.BeaHun_scaffold_50177                I 6 C 0
s Bison_bison.KN261452.1                                    199307 1 -    288883 t--
i Bison_bison.KN261452.1                                 I 6 C 0
s Bos_indicus.CM003047.1                                  20272512 1 +  48749331 t--
i Bos_indicus.CM003047.1                                 I 6 C 0
s Bos_mutus.JH880303.1                                     1125068 1 -   1948126 t--
i Bos_mutus.JH880303.1                                   I 6 C 0
s Bos_taurus.CM000203.6                                   18083150 1 +  45695690 t--
i Bos_taurus.CM000203.6                                  I 6 C 0
s Bubalus_bubalis.KI419123.1                               2818639 1 +   4408762 t--
i Bubalus_bubalis.KI419123.1                             I 6 C 0
s Camelus_bactrianus.KN276810.1                            9999096 2 -  17673402 t-t
i Camelus_bactrianus.KN276810.1                          I 6 I 1
s Camelus_dromedarius.KN272107.1                           2331560 2 -   7040546 t-t
i Camelus_dromedarius.KN272107.1                         I 6 I 1
s Camelus_ferus.KB017975.1                                  399836 2 -   1652518 t-t
i Camelus_ferus.KB017975.1                               I 6 I 1
s CanFam4.chr16                                           17795939 2 -  60362399 T-T
i CanFam4.chr16                                          I 4 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181996 2 -    185531 T-T
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 4 I 1
s Canis_lupus_dingo.QKWQ01000480.1                         9031383 2 -   9314153 t-t
i Canis_lupus_dingo.QKWQ01000480.1                       I 4 I 1
s Canis_lupus_familiaris.chr16                            17955647 2 -  59632846 t-t
i Canis_lupus_familiaris.chr16                           I 4 I 1
s Canis_lupus_orion.HG994398.1                            18496948 2 +  63665305 t-t
i Canis_lupus_orion.HG994398.1                           I 4 I 1
s Capra_aegagrus.CM003241.1                               18829461 1 +  46296322 t--
i Capra_aegagrus.CM003241.1                              I 6 C 0
s Capra_hircus.CM004588.1                                 18060181 1 -  44709034 t--
i Capra_hircus.CM004588.1                                I 6 C 0
s Carlito_syrichta.NW_007259797.1                           141220 2 -    496798 t-t
i Carlito_syrichta.NW_007259797.1                        C 0 I 1
s Carollia_perspicillata.CarPer_scaffold_92756                3058 2 -     11696 T-C
i Carollia_perspicillata.CarPer_scaffold_92756           I 2 I 1
s Castor_canadensis.CasCan_scaffold_2074                    133817 2 +    179628 T-T
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 1
s Catagonus_wagneri.CatWag_scaffold_2839                     89426 1 +    217609 T--
i Catagonus_wagneri.CatWag_scaffold_2839                 I 6 C 0
s Cavia_aperea.AVPZ01000300.1                             18347819 2 -  23392119 A-T
i Cavia_aperea.AVPZ01000300.1                            C 0 I 3
s Cavia_porcellus.DS562891.1                              18360079 2 -  23407841 A-T
i Cavia_porcellus.DS562891.1                             C 0 I 3
s Cavia_tschudii.CavTsc_scaffold_8919                        98953 2 +    143979 A-T
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 I 3
s Cephalopachus_bancanus.k141_2037105                         5136 2 -      8605 T-T
i Cephalopachus_bancanus.k141_2037105                    C 0 I 1
s Ceratotherium_simum.JH767749.1                          12228057 2 +  27778364 t-t
i Ceratotherium_simum.JH767749.1                         I 2 I 3
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2775 2 -      3715 T-T
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     I 2 I 3
s Cercocebus_atys.KQ010504.1                               4470762 2 +   4669795 t-t
i Cercocebus_atys.KQ010504.1                             C 0 I 1
s Cercocebus_chrysogaster.k141_393940                         9311 2 -     19203 T-T
i Cercocebus_chrysogaster.k141_393940                    C 0 I 1
s Cercocebus_lunulatus.k141_3846941                           3732 2 +      8260 T-T
i Cercocebus_lunulatus.k141_3846941                      C 0 I 1
s Cercocebus_torquatus.k141_3057011                           3960 2 +     27781 T-T
i Cercocebus_torquatus.k141_3057011                      C 0 I 1
s Cercopithecus_ascanius.k141_1024104                         4118 2 -     20310 T-T
i Cercopithecus_ascanius.k141_1024104                    C 0 I 1
s Cercopithecus_cephus.k141_1078548                           7102 2 +     29689 T-T
i Cercopithecus_cephus.k141_1078548                      C 0 I 1
s Cercopithecus_diana.k141_2427854                            1540 2 +      9989 T-T
i Cercopithecus_diana.k141_2427854                       C 0 I 1
s Cercopithecus_hamlyni.k141_187466                           9786 2 -     27936 T-T
i Cercopithecus_hamlyni.k141_187466                      C 0 I 1
s Cercopithecus_lowei.k141_457449                             9812 2 -     11289 T-T
i Cercopithecus_lowei.k141_457449                        C 0 I 1
s Cercopithecus_albogularis.ctg5                                38812184 2 +  39242232 T-T
i Cercopithecus_albogularis.ctg5                               C 0 I 1
s Cercopithecus_mona.ctg39                                21217883 2 -  21565898 T-T
i Cercopithecus_mona.ctg39                               C 0 I 1
s Cercopithecus_neglectus.k141_2526306                       34998 2 -     53127 T-T
i Cercopithecus_neglectus.k141_2526306                   C 0 I 1
s Cercopithecus_nictitans.k141_3278028                        2287 2 +      7159 T-T
i Cercopithecus_nictitans.k141_3278028                   C 0 I 1
s Cercopithecus_petaurista.k141_807961                        9805 2 -     27947 T-T
i Cercopithecus_petaurista.k141_807961                   C 0 I 1
s Cercopithecus_pogonias.k141_822820                          9781 2 +     17596 T-T
i Cercopithecus_pogonias.k141_822820                     C 0 I 1
s Cercopithecus_roloway.k141_3180641                         40281 2 -     41420 T-T
i Cercopithecus_roloway.k141_3180641                     C 0 I 1
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4982 2 -      6351 T-T
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 I 1
s Cheirogaleus_major.k141_333249                             16892 2 -     52598 T-T
i Cheirogaleus_major.k141_333249                         C 0 I 1
s Cheirogaleus_medius.k141_1055463                           12242 2 +     57038 T-T
i Cheirogaleus_medius.k141_1055463                       C 0 I 1
s Chinchilla_lanigera.JH722012.1                           1251177 2 +   2543920 A-T
i Chinchilla_lanigera.JH722012.1                         C 0 I 2
s Chlorocebus_aethiops.ctg25                              18423744 2 -  18827391 T-T
i Chlorocebus_aethiops.ctg25                             C 0 I 1
s Chlorocebus_pygerythrus.k141_1025673                       10187 2 -     50209 T-T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 I 1
s Chlorocebus_sabaeus.CM001947.1                         135417193 2 + 135778131 t-t
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 1
s Choloepus_didactylus.ChoDid_scaffold_45914                 15346 2 +     19366 T-T
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 I 1
s Choloepus_hoffmanni.KN194906.1                            170445 2 +    839153 t-t
i Choloepus_hoffmanni.KN194906.1                         C 0 I 1
s Chrysochloris_asiatica.ChrAsi_scaffold_172426               9819 2 -     10935 T-T
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          C 0 I 1
s Colobus_angolensis.KN981557.1                            1905719 2 +   2368649 t-t
i Colobus_angolensis.KN981557.1                          C 0 I 1
s Colobus_guereza.LG01                                   199945389 2 + 200372422 T-T
i Colobus_guereza.LG01                                   C 0 I 1
s Colobus_polykomos.k141_906115                              32260 2 +     84244 T-T
i Colobus_polykomos.k141_906115                          C 0 I 1
s Condylura_cristata.JH655891.1                           17546166 1 -  53390261 --T
i Condylura_cristata.JH655891.1                          I 3 I 314
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10681 2 -     20389 T-T
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 2 I 1
s Crocidura_indochinensis.CroInd_scaffold_287352               693 2 +      4208 T-T
i Crocidura_indochinensis.CroInd_scaffold_287352         I 7 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24386 2 -     87169 T-T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 4 I 1
s Cuniculus_paca.CunPac_flattened_line_231100                 3236 2 +      5455 A-C
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 I 3
s Dasyprocta_punctata.DasPun_flattened_line_206793            1590 2 +      3576 A-T
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 I 3
s Dasypus_novemcinctus.JH564415.1                            61254 2 +   2246927 T-T
i Dasypus_novemcinctus.JH564415.1                        C 0 I 1
s Daubentonia_madagascariensis.ctg71                      12533064 2 -  12879189 T-T
i Daubentonia_madagascariensis.ctg71                     C 0 I 1
s Delphinapterus_leucas.KZ290073.1                        16811403 1 +  35494412 t--
i Delphinapterus_leucas.KZ290073.1                       I 6 C 0
s Desmodus_rotundus.KZ672289.1                             8628090 2 +  20541912 t-t
i Desmodus_rotundus.KZ672289.1                           I 2 I 1
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669593 2 +   1390856 t-t
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 2 I 317
s Diceros_bicornis.DicBicMic_scaffold_5955                    2665 2 +    198055 T-T
i Diceros_bicornis.DicBicMic_scaffold_5955               I 2 I 3
s Dinomys_branickii.DinBra_scaffold_21862                    34645 2 +     67921 A-T
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 3
s Dipodomys_ordii.KN672350.1                              18895963 2 +  37912305 T-T
i Dipodomys_ordii.KN672350.1                             C 0 I 1
s Dipodomys_stephensi.DipSte_scaffold_75855                  12181 2 +     14536 T-T
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 I 1
s Dolichotis_patagonum.DolPat_scaffold_30833                 31836 2 -     42551 A-T
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 I 3
s Eidolon_helvum.KE759718.1                                   7593 2 +     11740 t-t
i Eidolon_helvum.KE759718.1                              I 2 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310468 1 +    607251 t--
i Elaphurus_davidianus.JRFZ01104969.1                    I 6 C 0
s Elephantulus_edwardii.JH947257.1                         1089181 2 +  10337057 A-T
i Elephantulus_edwardii.JH947257.1                       C 0 I 1
s Enhydra_lutris.KZ291758.1                               16325944 2 -  41312741 t-t
i Enhydra_lutris.KZ291758.1                              I 4 I 1
s Eptesicus_fuscus.JH977646.1                              2144245 2 -  14770903 t-t
i Eptesicus_fuscus.JH977646.1                            I 2 I 1
s Equus_asinus.JREZ01000139.1                              1279944 2 +   4378816 a-t
i Equus_asinus.JREZ01000139.1                            I 5 I 3
s Equus_caballus.CM000403.2                               18527765 2 -  39960074 a-t
i Equus_caballus.CM000403.2                              I 5 I 3
s Equus_przewalskii.KK951119.1                               29780 2 +    498745 a-t
i Equus_przewalskii.KK951119.1                           I 5 I 3
s Erinaceus_europaeus.JH835339.1                           3325485 2 -   7059049 T-T
i Erinaceus_europaeus.JH835339.1                         I 7 I 1
s Erythrocebus_patas.Contig38                             21200375 2 -  21539334 T-T
i Erythrocebus_patas.Contig38                            C 0 I 1
s Eschrichtius_robustus.EscRob_flattened_line_8968           11079 1 +    133382 T--
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 6 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             25016 1 -     44125 T--
i Eubalaena_japonica.EubJap_flattened_line_31514         I 6 C 0
s Eulemur_albifrons.k141_342033                               9572 2 -     14127 T-T
i Eulemur_albifrons.k141_342033                          C 0 I 1
s Eulemur_collaris.k141_377015                                2270 2 -     16928 T-T
i Eulemur_collaris.k141_377015                           C 0 I 1
s Eulemur_coronatus.k141_885031                              11303 2 -     25546 T-T
i Eulemur_coronatus.k141_885031                          C 0 I 1
s Eulemur_flavifrons.k141_1184614                             8488 2 +     26330 T-T
i Eulemur_flavifrons.k141_1184614                        C 0 I 1
s Eulemur_fulvus.k141_544389                                  9745 2 +     23973 T-T
i Eulemur_fulvus.k141_544389                             C 0 I 1
s Eulemur_macaco.k141_1562045                                 8488 2 +     75513 T-T
i Eulemur_macaco.k141_1562045                            C 0 I 1
s Eulemur_mongoz.k141_232305                                  6440 2 +     97555 T-T
i Eulemur_mongoz.k141_232305                             C 0 I 1
s Eulemur_rubriventer.k141_571033                             9366 2 +     26496 T-T
i Eulemur_rubriventer.k141_571033                        C 0 I 1
s Eulemur_rufus.k141_2367191                                  2383 2 +      2552 T-T
i Eulemur_rufus.k141_2367191                             C 0 I 1
s Eulemur_sanfordi.k141_1122526                               9551 2 +    111500 T-T
i Eulemur_sanfordi.k141_1122526                          C 0 I 1
s Felis_catus.CM001381.2                                  20233309 2 + 206538554 t-t
i Felis_catus.CM001381.2                                 I 3 I 1
s Felis_catus_fca126.CM031415.1                           20192139 2 + 205367284 t-t
i Felis_catus_fca126.CM031415.1                          I 3 I 1
s Felis_nigripes.FelNig_flattened_line_20823                  5664 2 -     36744 T-T
i Felis_nigripes.FelNig_flattened_line_20823             I 3 I 1
s Galeopterus_variegatus.GalVar_scaffold_56069               25631 2 +     26054 T-T
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 I 1
s Glis_glis.GliGli_scaffold_19807                            30517 2 +     49224 G-T
i Glis_glis.GliGli_scaffold_19807                        C 0 I 2
s Gorilla_beringei.k141_3596273                              11038 2 -     32273 T-T
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186333186 2 + 186649187 t-t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   30241 2 +     78134 T-A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 2
s Hapalemur_alaotrensis.k141_170648                           2636 2 -     19426 T-T
i Hapalemur_alaotrensis.k141_170648                      C 0 I 1
s Hapalemur_gilberti.k141_488810                              7780 2 -     15286 T-T
i Hapalemur_gilberti.k141_488810                         C 0 I 1
s Hapalemur_griseus.k141_1511508                              9418 2 +     18253 T-T
i Hapalemur_griseus.k141_1511508                         C 0 I 1
s Hapalemur_meridionalis.k141_248335                          9521 2 -     41752 T-T
i Hapalemur_meridionalis.k141_248335                     C 0 I 1
s Hapalemur_occidentalis.k141_907772                          9354 2 -     16460 T-T
i Hapalemur_occidentalis.k141_907772                     C 0 I 1
s Helogale_parvula.HelPar_flattened_line_2585               238306 2 +    327341 T-T
i Helogale_parvula.HelPar_flattened_line_2585            I 4 I 1
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17665 1 +     36099 T--
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 6 C 0
s Heterocephalus_glaber.JH602082.1                        20659741 2 +  22651954 A-T
i Heterocephalus_glaber.JH602082.1                       C 0 I 2
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 426 2 +       961 A-T
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 I 1
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112216 1 +    128679 T--
i Hippopotamus_amphibius.HipAmp_scaffold_9076            I 6 C 0
s Hipposideros_armiger.JXIK01000431.1                       108457 2 +   1711038 t-t
i Hipposideros_armiger.JXIK01000431.1                    I 2 I 1
s Hipposideros_galeritus.HipGal_scaffold_29171               39898 2 +     43066 T-T
i Hipposideros_galeritus.HipGal_scaffold_29171           I 2 I 1
s Hoolock_leuconedys.ctg274                                    429931 2 +    630532 T-T
i Hoolock_leuconedys.ctg274                                 C 0 I 1
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40774 2 +     55795 T-T
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 4 I 1
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20208 2 -    143317 A-T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 3
s Hylobates_agilis.k141_307679                               12862 2 -     15490 T-T
i Hylobates_agilis.k141_307679                           C 0 I 1
s Hylobates_klossii.k141_282416                              54867 2 +     67168 T-T
i Hylobates_klossii.k141_282416                          C 0 I 1
s Hylobates_pileatus_b.LG02                                     189538517 2 - 191637585 T-T
i Hylobates_pileatus_b.LG02                                     C 0 I 1
s Hylobates_pileatus_a.tarseq_633                            3331410 2 -  11177569 T-T
i Hylobates_pileatus_a.tarseq_633                          C 0 I 1
s Hystrix_cristata.HysCri_scaffold_5660                      81303 2 +    135385 A-T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 1
s Ictidomys_tridecemlineatus.JH393364.1                    7514760 2 -   7955117 t-t
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 1
s Indri_indri.k141_3655594                                   18337 2 +     31101 T-T
i Indri_indri.k141_3655594                               C 0 I 1
s Inia_geoffrensis.IniGeo_flattened_line_48101               22620 1 +     23964 T--
i Inia_geoffrensis.IniGeo_flattened_line_48101           I 6 C 0
s Jaculus_jaculus.JH725527.1                               8271542 2 -   9596543 T-T
i Jaculus_jaculus.JH725527.1                             C 0 I 1
s Lasiurus_borealis.LasBor_scaffold_32767                    12655 2 -     42476 T-T
i Lasiurus_borealis.LasBor_scaffold_32767                I 2 C 0
s Lemur_catta.scaffold_24                                 15519880 2 -  30322482 T-T
i Lemur_catta.scaffold_24                                C 0 I 1
s Leptonychotes_weddellii.KB714746.1                       3036277 2 +   3914936 t-t
i Leptonychotes_weddellii.KB714746.1                     I 4 I 1
s Lipotes_vexillifer.KE559953.1                             267672 1 -    662738 t--
i Lipotes_vexillifer.KE559953.1                          I 6 C 0
s Lophocebus_aterrimus.ctg367                              1432306 2 +   1826925 T-T
i Lophocebus_aterrimus.ctg367                            C 0 I 1
s Loris_lydekkerianus.k141_2539221                             860 2 +     11245 T-T
i Loris_lydekkerianus.k141_2539221                       C 0 I 1
s Loris_tardigradus.ctg83                                   999696 2 +   6120653 T-T
i Loris_tardigradus.ctg83                                C 0 I 1
s Loxodonta_africana.GL010049.1                            4214697 2 -  43346337 A-T
i Loxodonta_africana.GL010049.1                          C 0 I 1
s Lycaon_pictus.CM007581.1                                17951887 2 -  59628241 t-t
i Lycaon_pictus.CM007581.1                               I 4 I 1
s Macaca_arctoides.k141_2326796                               2127 2 +     40492 T-T
i Macaca_arctoides.k141_2326796                          C 0 I 1
s Macaca_assamensis.Contig5                               59671382 2 +  60120075 T-T
i Macaca_assamensis.Contig5                              C 0 I 1
s Macaca_cyclopis.k119_18836                                  7882 2 -     26193 T-T
i Macaca_cyclopis.k119_18836                             C 0 I 1
s Macaca_fascicularis.k141_814140                            75679 2 -    114318 T-T
i Macaca_fascicularis.k141_814140                        C 0 I 1
s Macaca_fuscata.k119_255327                                  1394 2 -     23192 T-T
i Macaca_fuscata.k119_255327                             C 0 I 1
s Macaca_leonina.k141_3550399                                10847 2 -     29190 T-T
i Macaca_leonina.k141_3550399                            C 0 I 1
s Macaca_maura.k141_2733130                                  19414 2 +     37952 T-T
i Macaca_maura.k141_2733130                              C 0 I 1
s Macaca_mulatta.NC_041758.1                             186834502 2 + 187317192 t-t
i Macaca_mulatta.NC_041758.1                             C 0 I 1
s Macaca_nemestrina.KQ007038.1                            25453065 2 -  25927173 t-t
i Macaca_nemestrina.KQ007038.1                           C 0 I 1
s Macaca_nigra.k141_1655396                                  75263 2 +     89720 T-T
i Macaca_nigra.k141_1655396                              C 0 I 1
s Macaca_radiata.k141_3680011                                 2261 2 +     20474 T-T
i Macaca_radiata.k141_3680011                            C 0 I 1
s Macaca_siberu.k141_635500                                   2062 2 -     14993 T-T
i Macaca_siberu.k141_635500                              C 0 I 1
s Macaca_silenus.Contig273                                  324934 2 -    668171 T-T
i Macaca_silenus.Contig273                               C 0 I 1
s Macaca_thibetana.k99_256239                                  365 2 -     24072 T-T
i Macaca_thibetana.k99_256239                            C 0 I 1
s Macaca_tonkeana.k141_1498238                               21001 2 -     45290 T-T
i Macaca_tonkeana.k141_1498238                           C 0 I 1
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87702 2 +     94391 T-T
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 2 C 0
s Mandrillus_leucophaeus.scaffold280                      23932550 2 -  24302211 T-T
i Mandrillus_leucophaeus.scaffold280                     C 0 I 1
s Mandrillus_sphinx.Contig270                               346727 2 +    752769 T-T
i Mandrillus_sphinx.Contig270                            C 0 I 1
s Manis_javanica.JSZB01003497.1                              15764 2 +    737560 t-t
i Manis_javanica.JSZB01003497.1                          I 4 I 1
s Manis_pentadactyla.KN006162.1                              47153 2 -    317179 t-t
i Manis_pentadactyla.KN006162.1                          I 4 I 1
s Marmota_marmota.CZRN01000018.1                          33097610 2 -  40650429 t-t
i Marmota_marmota.CZRN01000018.1                         C 0 I 1
s Megaderma_lyra.MegLyr_scaffold_4542                         6961 2 -    207569 T-T
i Megaderma_lyra.MegLyr_scaffold_4542                    I 2 I 1
s Mellivora_capensis.MelCap_flattened_line_69365              6662 2 +     13704 T-T
i Mellivora_capensis.MelCap_flattened_line_69365         I 4 I 1
s Mesoplodon_bidens.MesBid_scaffold_108144                    3288 1 +     10310 T--
i Mesoplodon_bidens.MesBid_scaffold_108144               I 6 C 0
s Microcebus_murinus.CM007674.1                           18283495 2 -  93316391 t-t
i Microcebus_murinus.CM007674.1                          C 0 I 1
s Microgale_talazaci.MicTal_scaffold_6613                    15546 2 -    145209 T-G
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 1
s Micronycteris_hirsuta.MicHir_scaffold_52381                13601 2 -     19307 T-T
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 2 I 1
s Miniopterus_natalensis.LDJU01000034.1                    1849276 2 +   8254450 t-t
i Miniopterus_natalensis.LDJU01000034.1                  I 2 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             33152 2 +     64694 T-T
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 2 C 0
s Miopithecus_ogouensis.k141_534055                           4300 2 -     28506 T-T
i Miopithecus_ogouensis.k141_534055                      C 0 I 1
s Mirounga_angustirostris.MirAng_flattened_line_22144        62607 2 -     63350 T-T
i Mirounga_angustirostris.MirAng_flattened_line_22144    I 4 I 1
s Mirza_zaza.k141_952172                                      4845 2 -     37649 T-T
i Mirza_zaza.k141_952172                                 C 0 I 1
s Monodon_monoceros.MonMon_M_scaffold_103                    26793 1 -    437263 T--
i Monodon_monoceros.MonMon_M_scaffold_103                I 6 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138005 2 -    366855 T-T
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 2 I 1
s Moschus_moschiferus.MosMos_scaffold_13123                    519 1 +     82753 T--
i Moschus_moschiferus.MosMos_scaffold_13123              I 6 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31508 2 +     37127 T-T
i Mungos_mungo.MunMun_flattened_line_23663               I 4 I 1
s Murina_feae.MurFea_scaffold_85699                           5305 2 +     14753 T-T
i Murina_feae.MurFea_scaffold_85699                      I 2 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2511 2 +     14296 T-T
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 1
s Mustela_putorius.JH418006.1                               297842 2 -  14710649 t-t
i Mustela_putorius.JH418006.1                            I 4 I 1
s Myotis_brandtii.KE162005.1                                278475 3 -  10118263 ttt
i Myotis_brandtii.KE162005.1                             I 2 C 0
s Myotis_davidii.KB100139.1                                1586032 2 -   6019432 t-t
i Myotis_davidii.KB100139.1                              I 2 C 0
s Myotis_lucifugus.GL429869.1                              3902240 3 -   4330536 ttt
i Myotis_lucifugus.GL429869.1                            I 2 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32800 3 +     33610 TTT
i Myotis_myotis.MyoMyo_scaffold_28916                    I 2 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186292 2 +    196477 T-T
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 I 1
s Nannospalax_galili.KL204047.1                            2025675 2 -   3037898 t-t
i Nannospalax_galili.KL204047.1                          C 0 I 1
s Nasalis_larvatus.k141_413338                               10300 2 +     21681 T-T
i Nasalis_larvatus.k141_413338                           C 0 I 1
s Neophocaena_asiaeorientalis.KZ687982.1                   5865749 1 +   7148211 t--
i Neophocaena_asiaeorientalis.KZ687982.1                 I 6 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756563 2 +    783361 A-T
i Noctilio_leporinus.NocLep_scaffold_251                 I 2 I 1
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146149 2 -   9404916 t-t
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 4 I 1
s Nycticebus_bengalensis.LG01                            102574664 2 - 196305487 T-T
i Nycticebus_bengalensis.LG01                            C 0 I 1
s Nycticebus_coucang.k141_5327727                             2350 2 +      8486 T-T
i Nycticebus_coucang.k141_5327727                        C 0 I 1
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105745091 2 + 199412804 T-T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 1
s Ochotona_princeps.JH802162.1                             1355934 2 +   3988456 t-t
i Ochotona_princeps.JH802162.1                           I 7 I 1
s Odobenus_rosmarus.KB229312.1                              500894 2 -   2017862 t-t
i Odobenus_rosmarus.KB229312.1                           I 4 I 1
s Odocoileus_virginianus.KZ100018.1                         144840 1 +    630418 t--
i Odocoileus_virginianus.KZ100018.1                      I 6 C 0
s Orcinus_orca.KB316932.1                                  2781664 1 -  10937097 t--
i Orcinus_orca.KB316932.1                                I 6 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               7248 2 -     18566 T-T
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 I 1
s Otocyon_megalotis.JAEUCK010005147.1                       458902 2 -    559221 t-t
i Otocyon_megalotis.JAEUCK010005147.1                    I 4 I 1
s Ovis_aries.CM001607.2                                   17585196 1 +  44047080 t--
i Ovis_aries.CM001607.2                                  I 6 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173617 1 -    191736 T--
i Ovis_canadensis.OviCan_scaffold_2572                   I 6 C 0
s Pan_paniscus.KQ411613.1                                    39156 2 +     80009 t-t
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189138048 2 + 189151597 t-t
i Pan_troglodytes.CM009242.2                             C 0 I 5
s Panthera_onca.PanOnc_flattened_line_3271                  147289 2 +    230217 T-T
i Panthera_onca.PanOnc_flattened_line_3271               I 3 I 1
s Panthera_pardus.KV860321.1                                259998 2 +  18783137 t-t
i Panthera_pardus.KV860321.1                             I 3 I 1
s Panthera_tigris.KE722367.1                               4717145 2 -   8748460 t-t
i Panthera_tigris.KE722367.1                             I 3 I 1
s Pantholops_hodgsonii.KE114653.1                          1264550 1 -   2937107 t--
i Pantholops_hodgsonii.KE114653.1                        I 6 C 0
s Papio_anubis.CM001495.2                                183438335 2 + 183742232 t-t
i Papio_anubis.CM001495.2                                C 0 I 1
s Papio_cynocephalus.k141_4307930                             2028 2 +     20448 T-T
i Papio_cynocephalus.k141_4307930                        C 0 I 1
s Papio_hamadryas.Contig39                                20558833 2 +  20919399 T-T
i Papio_hamadryas.Contig39                               C 0 I 1
s Papio_kindae.k141_1936966                                    771 2 +     41871 T-T
i Papio_kindae.k141_1936966                              C 0 I 1
s Papio_papio.k141_802527                                     4057 2 +     27711 T-T
i Papio_papio.k141_802527                                C 0 I 1
s Papio_ursinus.k141_3428135                                  4142 2 +      9205 T-T
i Papio_ursinus.k141_3428135                             C 0 I 1
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9024 2 -     78924 T-T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 4 I 1
s Perognathus_longimembris.PerPac_flattened_line_34437       25456 2 +     32600 T-T
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 I 1
s Petromus_typicus.PetTyp_scaffold_42190                     26196 2 -     29689 A-T
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 I 2
s Phocoena_phocoena.PhoPho_flattened_line_24159               8711 1 +     63832 T--
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 6 C 0
s Piliocolobus_badius.k141_1234363                           38812 2 +     62158 T-T
i Piliocolobus_badius.k141_1234363                       C 0 I 1
s Piliocolobus_gordonorum.k141_381342                        33534 2 +     89929 T-T
i Piliocolobus_gordonorum.k141_381342                    C 0 I 1
s Piliocolobus_kirkii.k141_448987                            34950 2 +     51399 T-T
i Piliocolobus_kirkii.k141_448987                        C 0 I 1
s Piliocolobus_tephrosceles.PDMG02000141.1                14291186 2 -  14605196 t-t
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 1
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              625 2 +     22620 T-T
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 2 I 1
s Platanista_gangetica.PlaMin_flattened_line_32310           34417 1 +     35617 T--
i Platanista_gangetica.PlaMin_flattened_line_32310       I 6 C 0
s Pongo_abelii.CM009266.2                                189126236 2 + 189387572 t-t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9565842 2 +   9816681 T-T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68461 2 -     81375 T-T
i Presbytis_comata.k141_677006                           C 0 I 1
s Presbytis_mitrata.k141_1087752                               282 2 +     19060 T-T
i Presbytis_mitrata.k141_1087752                         C 0 I 1
s Procavia_capensis.ProCapCap_scaffold_85530                 10175 2 -     22811 A-T
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 I 1
s Prolemur_simus.MPIZ01000396.1                            2592533 2 -   4620579 t-t
i Prolemur_simus.MPIZ01000396.1                          C 0 I 1
s Propithecus_coquerelli.NW_012148875.1                     986547 2 +   2598838 t-t
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 3
s Propithecus_coronatus.k141_347390                          24836 2 +     38485 T-T
i Propithecus_coronatus.k141_347390                      C 0 I 3
s Propithecus_diadema.k141_357118                              997 2 +      4256 T-T
i Propithecus_diadema.k141_357118                        C 0 I 3
s Propithecus_edwardsi.k141_1176054                          22355 2 +     35766 T-T
i Propithecus_edwardsi.k141_1176054                      C 0 I 3
s Propithecus_perrieri.k141_1200571                            538 2 -     24134 T-T
i Propithecus_perrieri.k141_1200571                      C 0 I 3
s Propithecus_tattersalli.k141_790011                        24350 2 -     67325 T-T
i Propithecus_tattersalli.k141_790011                    C 0 I 3
s Propithecus_verreauxi.k141_956661                            595 2 -      6182 T-T
i Propithecus_verreauxi.k141_956661                      C 0 I 3
s Pteronotus_parnellii.KE909381.1                            11398 2 -     21811 t-t
i Pteronotus_parnellii.KE909381.1                        I 2 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36853 2 +     42204 T-T
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 4 I 1
s Pteropus_alecto.KB030862.1                              22973862 2 +  28871421 T-T
i Pteropus_alecto.KB030862.1                             I 2 C 0
s Pteropus_vampyrus.KN534172.1                                1799 2 -      8028 T-T
i Pteropus_vampyrus.KN534172.1                           I 2 C 0
s Puma_concolor.QAVW01001104.1                            20270453 2 -  38429054 t-t
i Puma_concolor.QAVW01001104.1                           I 3 I 1
s Pygathrix_cinerea.k141_1153803                             10293 2 -     91421 T-T
i Pygathrix_cinerea.k141_1153803                         C 0 I 1
s Pygathrix_nigripes_b.ctg100                                 7604421 2 +   7812017 T-T
i Pygathrix_nigripes_b.ctg100                               C 0 I 1
s Pygathrix_nigripes_a.k141_215492                             10262 2 -     72585 T-T
i Pygathrix_nigripes_a.k141_215492                         C 0 I 1
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5088 1 +     55207 T--
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 6 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        367002 2 -   3329780 t-t
i Rhinolophus_sinicus.LVEH01000134.1                     I 2 I 1
s Rhinopithecus_bieti.k119_217274                             1977 2 -     11128 T-T
i Rhinopithecus_bieti.k119_217274                        C 0 I 1
s Rhinopithecus_roxellana.NC_044550.1                     91231332 2 - 195417433 t-t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 1
s Rhinopithecus_strykeri.ctg102                            7666981 2 +   7961872 T-T
i Rhinopithecus_strykeri.ctg102                          C 0 I 1
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84851 2 -     96226 T-T
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 2 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151538 1 -    313613 --T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 3 I 1
s Saiga_tatarica.SaiTat_scaffold_373180                       3739 1 +      4321 T--
i Saiga_tatarica.SaiTat_scaffold_373180                  I 6 C 0
s Semnopithecus_entellus.k141_11662                          14805 2 -     19888 T-T
i Semnopithecus_entellus.k141_11662                      C 0 I 1
s Semnopithecus_hypoleucos.k141_1615806                      22007 2 +     39453 T-T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 I 1
s Semnopithecus_johnii.k141_670120                            2533 2 +     27826 T-T
i Semnopithecus_johnii.k141_670120                       C 0 I 1
s Semnopithecus_priam.k141_638794                             2054 2 -     19483 T-T
i Semnopithecus_priam.k141_638794                        C 0 I 1
s Semnopithecus_schistaceus.k141_1584426                      2116 2 +      7198 T-T
i Semnopithecus_schistaceus.k141_1584426                 C 0 I 1
s Semnopithecus_vetulus.k141_1200928                         10376 2 +     15514 T-T
i Semnopithecus_vetulus.k141_1200928                     C 0 I 1
s Solenodon_paradoxus.SolPar_flattened_line_5840            187848 2 -    191337 T-T
i Solenodon_paradoxus.SolPar_flattened_line_5840         I 7 I 1
s Sorex_araneus.JH798187.1                                13647390 2 -  18376816 C-T
i Sorex_araneus.JH798187.1                               I 32 I 1
s Spermophilus_dauricus.KZ294078.1                         1948398 2 -   3870691 T-T
i Spermophilus_dauricus.KZ294078.1                       C 0 I 1
s Spilogale_gracilis.SpiGra_flattened_line_13525             27391 2 +     97271 T-T
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 4 I 1
s Suricata_suricatta.SurSur_flattened_line_6629              14378 2 -    196729 T-T
i Suricata_suricatta.SurSur_flattened_line_6629          I 4 I 1
s Sus_scrofa.CM000828.4                                   62882643 1 -  69701581 t--
i Sus_scrofa.CM000828.4                                  I 6 C 0
s Symphalangus_syndactylus.tarseq_199                      1088561 2 -   1523678 T-T
i Symphalangus_syndactylus.tarseq_199                    C 0 I 1
s Tadarida_brasiliensis.TadBra_scaffold_25820                 7003 2 +     41958 T-T
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 2 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69654 2 +    116680 T-T
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 I 1
s Tapirus_indicus.TapInd_scaffold_9301                      115387 2 -    156842 T-C
i Tapirus_indicus.TapInd_scaffold_9301                   I 2 I 3
s Tapirus_terrestris.TapTer_scaffold_755                    383842 2 +    539355 T-C
i Tapirus_terrestris.TapTer_scaffold_755                 I 2 I 3
s Tarsius_lariang.k141_2201908                               10835 2 +     70052 T-T
i Tarsius_lariang.k141_2201908                           C 0 I 1
s Tarsius_wallacei.k141_780063                               15140 2 +     25099 T-T
i Tarsius_wallacei.k141_780063                           C 0 I 1
s Theropithecus_gelada.CM009954.1                        186423379 2 + 186847797 t-t
i Theropithecus_gelada.CM009954.1                        C 0 I 1
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103530 2 +    114563 A-T
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 2
s Tolypeutes_matacus.TolMat_scaffold_228639                   2043 2 +      8208 T-T
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 I 1
s Tonatia_saurophila.TonSau_scaffold_294                     79146 2 +    610378 C-T
i Tonatia_saurophila.TonSau_scaffold_294                 I 3 I 1
s Trachypithecus_auratus.k141_722599                          6107 2 -     20410 T-T
i Trachypithecus_auratus.k141_722599                     C 0 I 1
s Trachypithecus_crepusculus.k141_1194022                    10303 2 +     15221 T-T
i Trachypithecus_crepusculus.k141_1194022                C 0 I 1
s Trachypithecus_cristatus.k141_580354                        6208 2 +     19930 T-T
i Trachypithecus_cristatus.k141_580354                   C 0 I 1
s Trachypithecus_francoisi.k141_1412647                       2638 2 -     19997 T-T
i Trachypithecus_francoisi.k141_1412647                  C 0 I 1
s Trachypithecus_geei.k141_277701                            42757 2 -     60166 T-T
i Trachypithecus_geei.k141_277701                        C 0 I 1
s Trachypithecus_germaini.k141_912491                        10230 2 -     27529 T-T
i Trachypithecus_germaini.k141_912491                    C 0 I 1
s Trachypithecus_hatinhensis.k141_143409                     10170 2 -     18194 T-T
i Trachypithecus_hatinhensis.k141_143409                 C 0 I 1
s Trachypithecus_laotum.k141_907409                           3905 2 -     21137 T-T
i Trachypithecus_laotum.k141_907409                      C 0 I 1
s Trachypithecus_leucocephalus.k141_587342                    2608 2 -     10723 T-T
i Trachypithecus_leucocephalus.k141_587342               C 0 I 1
s Trachypithecus_melamera.k141_434728                         1760 2 +      9834 T-T
i Trachypithecus_melamera.k141_434728                    C 0 I 1
s Trachypithecus_obscurus.k141_190785                        20078 2 +     32220 T-T
i Trachypithecus_obscurus.k141_190785                    C 0 I 1
s Trachypithecus_phayrei.ctg124                            5934175 2 +   6242583 T-T
i Trachypithecus_phayrei.ctg124                          C 0 I 1
s Trachypithecus_pileatus.k141_2007326                        3422 2 +     20839 T-T
i Trachypithecus_pileatus.k141_2007326                   C 0 I 1
s Tragulus_javanicus.TraJav_scaffold_140459                    854 1 -      1748 T--
i Tragulus_javanicus.TraJav_scaffold_140459              I 6 C 0
s Tupaia_chinensis.KB320699.1                              2150581 2 +   4065304 c-t
i Tupaia_chinensis.KB320699.1                            C 0 I 1
s Tupaia_tana.TupTan_flattened_line_97126                     3886 2 -     10553 C-T
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 1
s Uropsilus_gracilis.UroGra_scaffold_97021                    2105 1 -      4736 --T
i Uropsilus_gracilis.UroGra_scaffold_97021               I 3 I 1
s Tursiops_truncatus.MRVK01000835.1                       15737911 1 +  33153633 t--
i Tursiops_truncatus.MRVK01000835.1                      I 6 C 0
s Ursus_maritimus.KK499267.1                               4847094 2 -   5085361 t-t
i Ursus_maritimus.KK499267.1                             I 4 I 1
s Varecia_rubra.k141_590885                                   7226 2 +     50397 T-T
i Varecia_rubra.k141_590885                              C 0 I 1
s Varecia_variegata.k141_1128296                              7274 2 +     24756 T-T
i Varecia_variegata.k141_1128296                         C 0 I 1
s Vicugna_pacos.KN270157.1                                 5368587 2 -   5488506 t-t
i Vicugna_pacos.KN270157.1                               I 6 I 1
s Vulpes_lagopus.VulLag_flattened_line_30954                  7563 2 -     43706 T-T
i Vulpes_lagopus.VulLag_flattened_line_30954             I 4 I 1
s Xerus_inauris.XerIna_scaffold_48378                        19899 2 -     24430 T-T
i Xerus_inauris.XerIna_scaffold_48378                    C 0 I 1
s Zalophus_californianus.ZalCal_flattened_line_63728          2016 2 +      2932 T-T
i Zalophus_californianus.ZalCal_flattened_line_63728     I 4 I 1
s Zapus_hudsonius.ZapHud_scaffold_11398                      10169 2 +     63895 T-T
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 1
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11603 1 +     12536 T--
i Ziphius_cavirostris.ZipCav_flattened_line_71469        I 6 C 0
e Perodicticus_potto.k141_1092580                             3210 0 +     25941 C
e Perodicticus_ibeanus.k141_855320                            4842 0 +     13100 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Lepilemur_septentrionalis.k141_185316                      22934 4 +     54090 I
e Lepilemur_ruficaudatus.k141_582783                           754 56 -      1589 I
e Lepilemur_dorsalis.k141_577674                             24879 4 +     45836 I
e Lepilemur_ankaranensis.k141_596936                          6932 4 -     23766 I
e Kogia_breviceps.KogBre_flattened_line_192630                1875 2 -      3359 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galagoides_demidoff.k141_31856                              3217 0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Arctocebus_calabarensis.k141_288239                        14606 0 +     17124 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1805  5 +     62944 T-------T-T-T-A
s Acinonyx_jubatus.LLWD01001279.1                           823442  4 -   1699592 t-------c-c-t--
i Acinonyx_jubatus.LLWD01001279.1                        I 1 I 5
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507161  6 -  29979442 t-------c-t-ttt
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 1 I 4
s Ailurus_fulgens.LNAC01001112.1                             75382  6 -    347723 t-------c-t-ttt
i Ailurus_fulgens.LNAC01001112.1                         I 1 I 4
s Allactaga_bullata.AllBul_scaffold_9566                     65151  5 -     89534 C-------T-T-T-T
i Allactaga_bullata.AllBul_scaffold_9566                 I 1 I 5
s Allenopithecus_nigroviridis.k141_3361533                    9805  5 -     52922 A-------T-T-T-T
i Allenopithecus_nigroviridis.k141_3361533               I 1 C 0
s Allochrocebus_lhoesti.k141_4309873                          9738  5 -     28001 A-------T-T-T-T
i Allochrocebus_lhoesti.k141_4309873                     I 1 C 0
s Allochrocebus_preussi.k141_1442296                           184  5 -     18505 A-------T-T-T-T
i Allochrocebus_preussi.k141_1442296                     I 1 C 0
s Allochrocebus_solatus.k141_166128                           1033  5 -     12518 A-------T-T-T-T
i Allochrocebus_solatus.k141_166128                      I 1 C 0
s Ammotragus_lervia.NIVO01071767.1                          675344  3 -   2318259 ----------t-t-t
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 4
s Anoura_caudifer.AnoCau_scaffold_1412                      183288  6 +    412891 C-------C-TTT-G
i Anoura_caudifer.AnoCau_scaffold_1412                   I 1 I 3
s Antilocapra_americana.AntAmePen_scaffold_12469             97799  3 -    100397 ----------T-T-T
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 I 4
s Aplodontia_rufa.AprRuf_scaffold_68852                       7445  5 +     20879 C-------T-T-T-T
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 1 I 4
s Arctocebus_calabarensis.k141_288239                        14606  1 +     17124 --------------T
i Arctocebus_calabarensis.k141_288239                    C 0 I 4
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2644  6 +     43469 T-------A-TTT-T
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 1 I 4
s Avahi_laniger.k141_765380                                  49481  2 -     92717 ------------T-T
i Avahi_laniger.k141_765380                              I 3 I 5
s Avahi_peyrierasi.k141_1424874                              50106  2 +     85213 ------------T-T
i Avahi_peyrierasi.k141_1424874                          I 3 I 5
s Balaenoptera_acutorostrata.KI537508.1                   15191768  4 +  23207421 ----------t-ttt
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 4
s Balaenoptera_bonaerensis.DF707048.1                         2234  3 -     18090 ----------t-t-t
i Balaenoptera_bonaerensis.DF707048.1                    C 0 I 4
s Beatragus_hunteri.BeaHun_scaffold_50177                    26266  3 +     34529 ----------T-T-T
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 4
s Bison_bison.KN261452.1                                    199308  3 -    288883 ----------t-t-t
i Bison_bison.KN261452.1                                 C 0 I 4
s Bos_indicus.CM003047.1                                  20272513  3 +  48749331 ----------t-t-t
i Bos_indicus.CM003047.1                                 C 0 I 4
s Bos_mutus.JH880303.1                                     1125069  3 -   1948126 ----------t-t-t
i Bos_mutus.JH880303.1                                   C 0 I 4
s Bos_taurus.CM000203.6                                   18083151  3 +  45695690 ----------t-t-t
i Bos_taurus.CM000203.6                                  C 0 I 4
s Bubalus_bubalis.KI419123.1                               2818640  3 +   4408762 ----------t-t-t
i Bubalus_bubalis.KI419123.1                             C 0 I 179
s Camelus_bactrianus.KN276810.1                            9999099  5 -  17673402 a-------t-t-t-t
i Camelus_bactrianus.KN276810.1                          I 1 I 4
s Camelus_dromedarius.KN272107.1                           2331563  5 -   7040546 a-------t-t-t-t
i Camelus_dromedarius.KN272107.1                         I 1 I 4
s Camelus_ferus.KB017975.1                                  399839  5 -   1652518 a-------t-t-t-t
i Camelus_ferus.KB017975.1                               I 1 I 4
s CanFam4.chr16                                           17795942  6 -  60362399 T-------C-T-TTT
i CanFam4.chr16                                          I 1 I 4
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    181999  6 -    185531 T-------C-T-TTT
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 1 I 4
s Canis_lupus_dingo.QKWQ01000480.1                         9031386  6 -   9314153 t-------c-t-ttt
i Canis_lupus_dingo.QKWQ01000480.1                       I 1 I 4
s Canis_lupus_familiaris.chr16                            17955650  6 -  59632846 t-------c-t-ttt
i Canis_lupus_familiaris.chr16                           I 1 I 4
s Canis_lupus_orion.HG994398.1                            18496951  6 +  63665305 t-------c-t-ttt
i Canis_lupus_orion.HG994398.1                           I 1 I 4
s Capra_aegagrus.CM003241.1                               18829462  3 +  46296322 ----------t-t-t
i Capra_aegagrus.CM003241.1                              C 0 I 4
s Capra_hircus.CM004588.1                                 18060182  3 -  44709034 ----------t-t-t
i Capra_hircus.CM004588.1                                C 0 I 4
s Carlito_syrichta.NW_007259797.1                           141223  5 -    496798 c-------t-t-t-t
i Carlito_syrichta.NW_007259797.1                        I 1 I 5
s Carollia_perspicillata.CarPer_scaffold_92756                3061  6 -     11696 T-------C-TTT-G
i Carollia_perspicillata.CarPer_scaffold_92756           I 1 I 4
s Castor_canadensis.CasCan_scaffold_2074                    133820  5 +    179628 C-------T-T-T-T
i Castor_canadensis.CasCan_scaffold_2074                 I 1 I 4
s Catagonus_wagneri.CatWag_scaffold_2839                     89427  3 +    217609 ----------T-T-G
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 4
s Cavia_aperea.AVPZ01000300.1                             18347824  3 -  23392119 ----------T-T-T
i Cavia_aperea.AVPZ01000300.1                            I 3 I 4
s Cavia_porcellus.DS562891.1                              18360084  3 -  23407841 ----------T-T-T
i Cavia_porcellus.DS562891.1                             I 3 I 4
s Cavia_tschudii.CavTsc_scaffold_8919                        98958  3 +    143979 ----------T-T-T
i Cavia_tschudii.CavTsc_scaffold_8919                    I 3 I 4
s Cephalopachus_bancanus.k141_2037105                         5139  5 -      8605 C-------T-T-T-T
i Cephalopachus_bancanus.k141_2037105                    I 1 I 4
s Ceratotherium_simum.JH767749.1                          12228062  1 +  27778364 --------------t
i Ceratotherium_simum.JH767749.1                         I 3 I 4
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2780  1 -      3715 --------------T
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     I 3 I 4
s Cercocebus_atys.KQ010504.1                               4470765  5 +   4669795 a-------t-t-t-t
i Cercocebus_atys.KQ010504.1                             I 1 C 0
s Cercocebus_chrysogaster.k141_393940                         9314  5 -     19203 A-------T-T-T-T
i Cercocebus_chrysogaster.k141_393940                    I 1 C 0
s Cercocebus_lunulatus.k141_3846941                           3735  5 +      8260 A-------T-T-T-T
i Cercocebus_lunulatus.k141_3846941                      I 1 C 0
s Cercocebus_torquatus.k141_3057011                           3963  5 +     27781 A-------T-T-T-T
i Cercocebus_torquatus.k141_3057011                      I 1 C 0
s Cercopithecus_ascanius.k141_1024104                         4121  5 -     20310 A-------T-T-T-T
i Cercopithecus_ascanius.k141_1024104                    I 1 C 0
s Cercopithecus_cephus.k141_1078548                           7105  5 +     29689 A-------T-T-T-T
i Cercopithecus_cephus.k141_1078548                      I 1 C 0
s Cercopithecus_diana.k141_2427854                            1543  5 +      9989 A-------T-T-T-T
i Cercopithecus_diana.k141_2427854                       I 1 C 0
s Cercopithecus_hamlyni.k141_187466                           9789  5 -     27936 A-------T-T-T-T
i Cercopithecus_hamlyni.k141_187466                      I 1 C 0
s Cercopithecus_lowei.k141_457449                             9815  5 -     11289 A-------T-T-T-T
i Cercopithecus_lowei.k141_457449                        I 1 C 0
s Cercopithecus_albogularis.ctg5                                38812187  5 +  39242232 A-------T-T-T-T
i Cercopithecus_albogularis.ctg5                               I 1 C 0
s Cercopithecus_mona.ctg39                                21217886  5 -  21565898 A-------T-T-T-T
i Cercopithecus_mona.ctg39                               I 1 C 0
s Cercopithecus_neglectus.k141_2526306                       35001  5 -     53127 A-------T-T-T-T
i Cercopithecus_neglectus.k141_2526306                   I 1 C 0
s Cercopithecus_nictitans.k141_3278028                        2290  5 +      7159 A-------T-T-T-T
i Cercopithecus_nictitans.k141_3278028                   I 1 C 0
s Cercopithecus_petaurista.k141_807961                        9808  5 -     27947 A-------T-T-T-T
i Cercopithecus_petaurista.k141_807961                   I 1 C 0
s Cercopithecus_pogonias.k141_822820                          9784  5 +     17596 A-------T-T-T-T
i Cercopithecus_pogonias.k141_822820                     I 1 C 0
s Cercopithecus_roloway.k141_3180641                         40284  5 -     41420 A-------T-T-T-T
i Cercopithecus_roloway.k141_3180641                     I 1 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4985  5 -      6351 T-------C-T-T-T
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       I 1 I 4
s Cheirogaleus_major.k141_333249                             16895  3 -     52598 C-------T-T----
i Cheirogaleus_major.k141_333249                         I 1 I 6
s Cheirogaleus_medius.k141_1055463                           12245  3 +     57038 C-------T-T----
i Cheirogaleus_medius.k141_1055463                       I 1 I 6
s Chinchilla_lanigera.JH722012.1                           1251181  3 +   2543920 ----------T-T-T
i Chinchilla_lanigera.JH722012.1                         I 2 I 4
s Chlorocebus_aethiops.ctg25                              18423747  5 -  18827391 A-------T-T-T-T
i Chlorocebus_aethiops.ctg25                             I 1 C 0
s Chlorocebus_pygerythrus.k141_1025673                       10190  5 -     50209 A-------T-T-T-T
i Chlorocebus_pygerythrus.k141_1025673                   I 1 C 0
s Chlorocebus_sabaeus.CM001947.1                         135417196  5 + 135778131 a-------t-t-t-t
i Chlorocebus_sabaeus.CM001947.1                         I 1 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15349  5 +     19366 T-------C-T-T-T
i Choloepus_didactylus.ChoDid_scaffold_45914             I 1 I 4
s Choloepus_hoffmanni.KN194906.1                            170448  5 +    839153 t-------c-t-t-t
i Choloepus_hoffmanni.KN194906.1                         I 1 I 4
s Chrysochloris_asiatica.ChrAsi_scaffold_172426               9822  5 -     10935 C-------A-T-T-T
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          I 1 I 11
s Colobus_angolensis.KN981557.1                            1905722  5 +   2368649 a-------t-t-t-t
i Colobus_angolensis.KN981557.1                          I 1 C 0
s Colobus_guereza.LG01                                   199945392  5 + 200372422 A-------T-T-T-T
i Colobus_guereza.LG01                                   I 1 C 0
s Colobus_polykomos.k141_906115                              32263  5 +     84244 A-------T-T-T-T
i Colobus_polykomos.k141_906115                          I 1 C 0
s Condylura_cristata.JH655891.1                           17546481  1 -  53390261 t--------------
i Condylura_cristata.JH655891.1                          I 314 I 2
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10684  6 -     20389 T-------CCA-T-T
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 1 I 4
s Crocidura_indochinensis.CroInd_scaffold_287352               696  5 +      4208 T-------C-C-T-T
i Crocidura_indochinensis.CroInd_scaffold_287352         I 1 I 130
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24389  6 -     87169 C-------C-T-TTT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 1 I 5
s Cuniculus_paca.CunPac_flattened_line_231100                 3241  3 +      5455 ----------T-T-T
i Cuniculus_paca.CunPac_flattened_line_231100            I 3 I 4
s Dasyprocta_punctata.DasPun_flattened_line_206793            1595  3 +      3576 ----------T-T-T
i Dasyprocta_punctata.DasPun_flattened_line_206793       I 3 I 4
s Dasypus_novemcinctus.JH564415.1                            61257  5 +   2246927 T-------C-T-C-T
i Dasypus_novemcinctus.JH564415.1                        I 1 I 4
s Daubentonia_madagascariensis.ctg71                      12533067  5 -  12879189 C-------T-T-T-T
i Daubentonia_madagascariensis.ctg71                     I 1 I 4
s Delphinapterus_leucas.KZ290073.1                        16811404  3 +  35494412 ----------t-t-t
i Delphinapterus_leucas.KZ290073.1                       C 0 I 4
s Desmodus_rotundus.KZ672289.1                             8628093  6 +  20541912 t-------c-ttt-t
i Desmodus_rotundus.KZ672289.1                           I 1 I 4
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669912  1 +   1390856 --------------t
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 317 I 4
s Diceros_bicornis.DicBicMic_scaffold_5955                    2670  1 +    198055 --------------T
i Diceros_bicornis.DicBicMic_scaffold_5955               I 3 I 4
s Dinomys_branickii.DinBra_scaffold_21862                    34650  3 +     67921 ----------T-T-T
i Dinomys_branickii.DinBra_scaffold_21862                I 3 I 4
s Dipodomys_ordii.KN672350.1                              18895966  5 +  37912305 A-------T-T-T-T
i Dipodomys_ordii.KN672350.1                             I 1 I 4
s Dipodomys_stephensi.DipSte_scaffold_75855                  12184  5 +     14536 G-------T-T-T-T
i Dipodomys_stephensi.DipSte_scaffold_75855              I 1 I 4
s Dolichotis_patagonum.DolPat_scaffold_30833                 31841  3 -     42551 ----------T-C-T
i Dolichotis_patagonum.DolPat_scaffold_30833             I 3 I 4
s Eidolon_helvum.KE759718.1                                   7595  2 +     11740 ------------t-t
i Eidolon_helvum.KE759718.1                              C 0 I 4
s Elaphurus_davidianus.JRFZ01104969.1                       310469  3 +    607251 ----------t-t-t
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 4
s Elephantulus_edwardii.JH947257.1                         1089184  5 +  10337057 T-------C-T-T-T
i Elephantulus_edwardii.JH947257.1                       I 1 I 4
s Enhydra_lutris.KZ291758.1                               16325947  6 -  41312741 t-------c-t-ttt
i Enhydra_lutris.KZ291758.1                              I 1 I 4
s Eptesicus_fuscus.JH977646.1                              2144248  2 -  14770903 ------------t-t
i Eptesicus_fuscus.JH977646.1                            I 1 I 4
s Equus_asinus.JREZ01000139.1                              1279949  1 +   4378816 --------------t
i Equus_asinus.JREZ01000139.1                            I 3 I 4
s Equus_caballus.CM000403.2                               18527770  1 -  39960074 --------------t
i Equus_caballus.CM000403.2                              I 3 I 4
s Equus_przewalskii.KK951119.1                               29785  1 +    498745 --------------t
i Equus_przewalskii.KK951119.1                           I 3 I 4
s Erinaceus_europaeus.JH835339.1                           3325488  5 -   7059049 T-------C-T-C-T
i Erinaceus_europaeus.JH835339.1                         I 1 C 0
s Erythrocebus_patas.Contig38                             21200378  5 -  21539334 A-------T-T-T-T
i Erythrocebus_patas.Contig38                            I 1 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11080  3 +    133382 ----------T-T-T
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 4
s Eubalaena_japonica.EubJap_flattened_line_31514             25017  3 -     44125 ----------T-T-T
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 I 4
s Eulemur_albifrons.k141_342033                               9575  5 -     14127 C-------T-T-T-T
i Eulemur_albifrons.k141_342033                          I 1 I 4
s Eulemur_collaris.k141_377015                                2273  5 -     16928 C-------T-T-T-T
i Eulemur_collaris.k141_377015                           I 1 I 4
s Eulemur_coronatus.k141_885031                              11306  5 -     25546 C-------T-T-T-T
i Eulemur_coronatus.k141_885031                          I 1 I 4
s Eulemur_flavifrons.k141_1184614                             8491  5 +     26330 C-------T-T-T-T
i Eulemur_flavifrons.k141_1184614                        I 1 I 4
s Eulemur_fulvus.k141_544389                                  9748  5 +     23973 C-------T-T-T-T
i Eulemur_fulvus.k141_544389                             I 1 I 4
s Eulemur_macaco.k141_1562045                                 8491  5 +     75513 C-------T-T-T-T
i Eulemur_macaco.k141_1562045                            I 1 I 4
s Eulemur_mongoz.k141_232305                                  6443  5 +     97555 C-------T-T-T-T
i Eulemur_mongoz.k141_232305                             I 1 I 4
s Eulemur_rubriventer.k141_571033                             9369  5 +     26496 C-------T-T-T-T
i Eulemur_rubriventer.k141_571033                        I 1 I 4
s Eulemur_rufus.k141_2367191                                  2386  5 +      2552 C-------T-T-T-T
i Eulemur_rufus.k141_2367191                             I 1 I 4
s Eulemur_sanfordi.k141_1122526                               9554  5 +    111500 C-------T-T-T-T
i Eulemur_sanfordi.k141_1122526                          I 1 I 4
s Felis_catus.CM001381.2                                  20233312  4 + 206538554 t-------c-c-t--
i Felis_catus.CM001381.2                                 I 1 I 5
s Felis_catus_fca126.CM031415.1                           20192142  4 + 205367284 t-------c-c-t--
i Felis_catus_fca126.CM031415.1                          I 1 I 5
s Felis_nigripes.FelNig_flattened_line_20823                  5667  4 -     36744 T-------C-C-T--
i Felis_nigripes.FelNig_flattened_line_20823             I 1 I 5
s Galeopterus_variegatus.GalVar_scaffold_56069               25634  2 +     26054 ------------T-T
i Galeopterus_variegatus.GalVar_scaffold_56069           I 1 I 4
s Glis_glis.GliGli_scaffold_19807                            30521  5 +     49224 A-------T-T-T-T
i Glis_glis.GliGli_scaffold_19807                        I 2 I 4
s Gorilla_beringei.k141_3596273                              11040  5 -     32273 T-------T-T-T-A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186333188  5 + 186649187 t-------t-t-t-a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   30245  5 +     78134 C-------T-T-T-T
i Graphiurus_murinus.GraMur_scaffold_10447               I 2 I 4
s Hapalemur_alaotrensis.k141_170648                           2639  6 -     19426 C-------TTT-T-T
i Hapalemur_alaotrensis.k141_170648                      I 1 I 4
s Hapalemur_gilberti.k141_488810                              7783  6 -     15286 C-------TTT-T-T
i Hapalemur_gilberti.k141_488810                         I 1 I 4
s Hapalemur_griseus.k141_1511508                              9421  6 +     18253 C-------TTT-T-T
i Hapalemur_griseus.k141_1511508                         I 1 I 4
s Hapalemur_meridionalis.k141_248335                          9524  6 -     41752 C-------TTT-T-T
i Hapalemur_meridionalis.k141_248335                     I 1 I 4
s Hapalemur_occidentalis.k141_907772                          9357  6 -     16460 C-------TTT-T-T
i Hapalemur_occidentalis.k141_907772                     I 1 I 4
s Helogale_parvula.HelPar_flattened_line_2585               238309  6 +    327341 T-------C-T-TTT
i Helogale_parvula.HelPar_flattened_line_2585            I 1 I 5
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17666  3 +     36099 ----------T-T-T
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 I 4
s Heterocephalus_glaber.JH602082.1                        20659745  3 +  22651954 ----------T-T-T
i Heterocephalus_glaber.JH602082.1                       I 2 I 4
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 429  5 +       961 T-------C-T-G-C
i Heterohyrax_brucei.HetBruBak_scaffold_383740           I 1 I 4
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112217  3 +    128679 ----------T-T-T
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 I 4
s Hipposideros_armiger.JXIK01000431.1                       108460  6 +   1711038 t-------ctt-t-t
i Hipposideros_armiger.JXIK01000431.1                    I 1 I 4
s Hipposideros_galeritus.HipGal_scaffold_29171               39901  6 +     43066 T-------CTT-T-T
i Hipposideros_galeritus.HipGal_scaffold_29171           I 1 I 4
s Hoolock_leuconedys.ctg274                                    429934  5 +    630532 T-------T-T-T-T
i Hoolock_leuconedys.ctg274                                 I 1 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40777  6 +     55795 C-------T-T-TTT
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 1 I 7
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20213  3 -    143317 ----------T-T-T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 3 I 4
s Hylobates_agilis.k141_307679                               12865  5 -     15490 T-------T-T-T-A
i Hylobates_agilis.k141_307679                           I 1 C 0
s Hylobates_klossii.k141_282416                              54870  5 +     67168 T-------T-T-T-T
i Hylobates_klossii.k141_282416                          I 1 C 0
s Hylobates_pileatus_b.LG02                                     189538520  5 - 191637585 T-------T-T-T-T
i Hylobates_pileatus_b.LG02                                     I 1 C 0
s Hylobates_pileatus_a.tarseq_633                            3331413  5 -  11177569 T-------T-T-T-T
i Hylobates_pileatus_a.tarseq_633                          I 1 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      81306  6 +    135385 C------AT-T-T-T
i Hystrix_cristata.HysCri_scaffold_5660                  I 1 I 4
s Ictidomys_tridecemlineatus.JH393364.1                    7514763  5 -   7955117 c-------t-t-c-t
i Ictidomys_tridecemlineatus.JH393364.1                  I 1 I 4
s Indri_indri.k141_3655594                                   18340  5 +     31101 C-------T-T-T-T
i Indri_indri.k141_3655594                               I 1 I 5
s Inia_geoffrensis.IniGeo_flattened_line_48101               22621  3 +     23964 ----------T-T-T
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 I 4
s Jaculus_jaculus.JH725527.1                               8271545  5 -   9596543 C-------T-T-T-T
i Jaculus_jaculus.JH725527.1                             I 1 I 5
s Lasiurus_borealis.LasBor_scaffold_32767                    12657  2 -     42476 ------------T-T
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 4
s Lemur_catta.scaffold_24                                 15519883  6 -  30322482 C-------TTT-T-T
i Lemur_catta.scaffold_24                                I 1 I 4
s Leptonychotes_weddellii.KB714746.1                       3036280  6 +   3914936 t-------c-t-ttt
i Leptonychotes_weddellii.KB714746.1                     I 1 I 4
s Lipotes_vexillifer.KE559953.1                             267673  3 -    662738 ----------t-t-t
i Lipotes_vexillifer.KE559953.1                          C 0 I 4
s Lophocebus_aterrimus.ctg367                              1432309  5 +   1826925 A-------T-T-T-T
i Lophocebus_aterrimus.ctg367                            I 1 C 0
s Loris_lydekkerianus.k141_2539221                             863  5 +     11245 T-------T-T-T-T
i Loris_lydekkerianus.k141_2539221                       I 1 I 4
s Loris_tardigradus.ctg83                                   999699  5 +   6120653 T-------T-T-T-T
i Loris_tardigradus.ctg83                                I 1 I 5
s Loxodonta_africana.GL010049.1                            4214700  5 -  43346337 T-------C-T-T-C
i Loxodonta_africana.GL010049.1                          I 1 I 4
s Lycaon_pictus.CM007581.1                                17951890  6 -  59628241 t-------c-t-ttt
i Lycaon_pictus.CM007581.1                               I 1 I 4
s Macaca_arctoides.k141_2326796                               2130  5 +     40492 A-------T-T-T-T
i Macaca_arctoides.k141_2326796                          I 1 C 0
s Macaca_assamensis.Contig5                               59671385  5 +  60120075 A-------T-T-T-T
i Macaca_assamensis.Contig5                              I 1 C 0
s Macaca_cyclopis.k119_18836                                  7885  5 -     26193 A-------T-T-T-T
i Macaca_cyclopis.k119_18836                             I 1 C 0
s Macaca_fascicularis.k141_814140                            75682  5 -    114318 A-------T-T-T-T
i Macaca_fascicularis.k141_814140                        I 1 C 0
s Macaca_fuscata.k119_255327                                  1397  5 -     23192 A-------T-T-T-T
i Macaca_fuscata.k119_255327                             I 1 C 0
s Macaca_leonina.k141_3550399                                10850  5 -     29190 A-------T-T-T-T
i Macaca_leonina.k141_3550399                            I 1 C 0
s Macaca_maura.k141_2733130                                  19417  5 +     37952 A-------T-T-T-T
i Macaca_maura.k141_2733130                              I 1 C 0
s Macaca_mulatta.NC_041758.1                             186834505  5 + 187317192 a-------t-t-t-t
i Macaca_mulatta.NC_041758.1                             I 1 C 0
s Macaca_nemestrina.KQ007038.1                            25453068  5 -  25927173 a-------t-t-t-t
i Macaca_nemestrina.KQ007038.1                           I 1 C 0
s Macaca_nigra.k141_1655396                                  75266  5 +     89720 A-------T-T-T-T
i Macaca_nigra.k141_1655396                              I 1 C 0
s Macaca_radiata.k141_3680011                                 2264  5 +     20474 A-------T-T-T-T
i Macaca_radiata.k141_3680011                            I 1 C 0
s Macaca_siberu.k141_635500                                   2065  5 -     14993 A-------T-T-T-T
i Macaca_siberu.k141_635500                              I 1 C 0
s Macaca_silenus.Contig273                                  324937  5 -    668171 A-------T-T-T-T
i Macaca_silenus.Contig273                               I 1 C 0
s Macaca_thibetana.k99_256239                                  368  5 -     24072 A-------T-T-T-T
i Macaca_thibetana.k99_256239                            I 1 C 0
s Macaca_tonkeana.k141_1498238                               21004  5 -     45290 A-------T-T-T-T
i Macaca_tonkeana.k141_1498238                           I 1 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87704  2 +     94391 ------------T-T
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 4
s Mandrillus_leucophaeus.scaffold280                      23932553  5 -  24302211 A-------T-T-T-T
i Mandrillus_leucophaeus.scaffold280                     I 1 C 0
s Mandrillus_sphinx.Contig270                               346730  5 +    752769 A-------T-T-T-T
i Mandrillus_sphinx.Contig270                            I 1 C 0
s Manis_javanica.JSZB01003497.1                              15767  6 +    737560 t-------a-t-ttt
i Manis_javanica.JSZB01003497.1                          I 1 I 4
s Manis_pentadactyla.KN006162.1                              47156  6 -    317179 t-------a-t-ttt
i Manis_pentadactyla.KN006162.1                          I 1 I 4
s Marmota_marmota.CZRN01000018.1                          33097613  5 -  40650429 c-------t-t-c-t
i Marmota_marmota.CZRN01000018.1                         I 1 I 4
s Megaderma_lyra.MegLyr_scaffold_4542                         6964  7 -    207569 T-------CTT-TTT
i Megaderma_lyra.MegLyr_scaffold_4542                    I 1 I 4
s Mellivora_capensis.MelCap_flattened_line_69365              6665  1 +     13704 --------------T
i Mellivora_capensis.MelCap_flattened_line_69365         I 1 I 4
s Mesoplodon_bidens.MesBid_scaffold_108144                    3289  3 +     10310 ----------T-T-T
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 I 4
s Microcebus_murinus.CM007674.1                           18283498  3 -  93316391 c-------t-t----
i Microcebus_murinus.CM007674.1                          I 1 I 7
s Microgale_talazaci.MicTal_scaffold_6613                    15549  5 -    145209 T-------G-T-T-C
i Microgale_talazaci.MicTal_scaffold_6613                I 1 I 3
s Micronycteris_hirsuta.MicHir_scaffold_52381                13604  6 -     19307 T-------C-TTT-T
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 1 I 4
s Miniopterus_natalensis.LDJU01000034.1                    1849278  2 +   8254450 ------------t-t
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 208
s Miniopterus_schreibersii.MinSch_scaffold_18080             33154  2 +     64694 ------------T-T
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 9
s Miopithecus_ogouensis.k141_534055                           4303  5 -     28506 A-------T-T-T-T
i Miopithecus_ogouensis.k141_534055                      I 1 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62610  6 -     63350 T-------C-T-TTT
i Mirounga_angustirostris.MirAng_flattened_line_22144    I 1 I 4
s Mirza_zaza.k141_952172                                      4848  3 -     37649 C-------T-T----
i Mirza_zaza.k141_952172                                 I 1 I 6
s Monodon_monoceros.MonMon_M_scaffold_103                    26794  3 -    437263 ----------T-T-T
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 4
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138008  6 -    366855 T-------C-TTT-T
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 1 I 4
s Moschus_moschiferus.MosMos_scaffold_13123                    520  3 +     82753 ----------T-T-T
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 4
s Mungos_mungo.MunMun_flattened_line_23663                   31511  6 +     37127 T-------C-T-TTT
i Mungos_mungo.MunMun_flattened_line_23663               I 1 I 5
s Murina_feae.MurFea_scaffold_85699                           5307  2 +     14753 ------------T-T
i Murina_feae.MurFea_scaffold_85699                      C 0 I 4
s Muscardinus_avellanarius.MusAve_scaffold_82313              2514  5 +     14296 C-------T-T-T-G
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 1 I 4
s Mustela_putorius.JH418006.1                               297845  6 -  14710649 t-------c-t-ttt
i Mustela_putorius.JH418006.1                            I 1 I 4
s Myotis_brandtii.KE162005.1                                278478  3 -  10118263 ------------ttt
i Myotis_brandtii.KE162005.1                             C 0 I 4
s Myotis_davidii.KB100139.1                                1586034  2 -   6019432 ------------t-t
i Myotis_davidii.KB100139.1                              C 0 I 4
s Myotis_lucifugus.GL429869.1                              3902243  2 -   4330536 ------------t-t
i Myotis_lucifugus.GL429869.1                            C 0 I 4
s Myotis_myotis.MyoMyo_scaffold_28916                        32803  2 +     33610 ------------T-T
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 I 4
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186295  6 +    196477 T-------A-TCT-T
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 1 I 4
s Nannospalax_galili.KL204047.1                            2025678  5 -   3037898 c-------t-t-t-c
i Nannospalax_galili.KL204047.1                          I 1 I 4
s Nasalis_larvatus.k141_413338                               10303  5 +     21681 A-------T-T-T-T
i Nasalis_larvatus.k141_413338                           I 1 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865750  3 +   7148211 ----------t-t-t
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 4
s Noctilio_leporinus.NocLep_scaffold_251                    756566  6 +    783361 A-------C-TTT-T
i Noctilio_leporinus.NocLep_scaffold_251                 I 1 I 4
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146152  6 -   9404916 t-------c-t-ttt
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 1 I 4
s Nycticebus_bengalensis.LG01                            102574667  5 - 196305487 C-------T-T-T-T
i Nycticebus_bengalensis.LG01                            I 1 I 4
s Nycticebus_coucang.k141_5327727                             2353  5 +      8486 C-------T-T-T-T
i Nycticebus_coucang.k141_5327727                        I 1 I 4
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105745094  5 + 199412804 C-------T-T-T-T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 1 I 4
s Ochotona_princeps.JH802162.1                             1355937  5 +   3988456 t-------t-t-t-t
i Ochotona_princeps.JH802162.1                           I 1 I 4
s Odobenus_rosmarus.KB229312.1                              500897  6 -   2017862 t-------c-t-tct
i Odobenus_rosmarus.KB229312.1                           I 1 I 4
s Odocoileus_virginianus.KZ100018.1                         144841  3 +    630418 ----------t-t-t
i Odocoileus_virginianus.KZ100018.1                      C 0 I 4
s Orcinus_orca.KB316932.1                                  2781665  3 -  10937097 ----------t-t-t
i Orcinus_orca.KB316932.1                                C 0 I 4
s Orycteropus_afer.OryAfe_flattened_line_144387               7251  5 -     18566 T-------C-T-T-T
i Orycteropus_afer.OryAfe_flattened_line_144387          I 1 I 4
s Otocyon_megalotis.JAEUCK010005147.1                       458905  6 -    559221 t-------c-t-ttt
i Otocyon_megalotis.JAEUCK010005147.1                    I 1 I 4
s Ovis_aries.CM001607.2                                   17585197  3 +  44047080 ----------t-t-t
i Ovis_aries.CM001607.2                                  C 0 I 4
s Ovis_canadensis.OviCan_scaffold_2572                      173618  3 -    191736 ----------T-T-T
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 I 4
s Pan_paniscus.KQ411613.1                                    39158  3 +     80009 t-------t-t----
i Pan_paniscus.KQ411613.1                                C 0 I 1
s Pan_troglodytes.NBAG03001836.1                             25074  5 +     51860 t-------t-t-t-a
i Pan_troglodytes.NBAG03001836.1                         I 23 I 76
s Panthera_onca.PanOnc_flattened_line_3271                  147292  4 +    230217 T-------C-C-T--
i Panthera_onca.PanOnc_flattened_line_3271               I 1 I 5
s Panthera_pardus.KV860321.1                                260001  4 +  18783137 t-------c-c-t--
i Panthera_pardus.KV860321.1                             I 1 I 5
s Panthera_tigris.KE722367.1                               4717148  4 -   8748460 t-------c-c-t--
i Panthera_tigris.KE722367.1                             I 1 I 5
s Pantholops_hodgsonii.KE114653.1                          1264551  3 -   2937107 ----------t-t-t
i Pantholops_hodgsonii.KE114653.1                        C 0 I 4
s Papio_anubis.CM001495.2                                183438338  5 + 183742232 a-------t-t-t-t
i Papio_anubis.CM001495.2                                I 1 C 0
s Papio_cynocephalus.k141_4307930                             2031  5 +     20448 A-------T-T-T-T
i Papio_cynocephalus.k141_4307930                        I 1 C 0
s Papio_hamadryas.Contig39                                20558836  5 +  20919399 A-------T-T-T-T
i Papio_hamadryas.Contig39                               I 1 C 0
s Papio_kindae.k141_1936966                                    774  5 +     41871 A-------T-T-T-T
i Papio_kindae.k141_1936966                              I 1 C 0
s Papio_papio.k141_802527                                     4060  5 +     27711 A-------T-T-T-T
i Papio_papio.k141_802527                                I 1 C 0
s Papio_ursinus.k141_3428135                                  4145  5 +      9205 A-------T-T-T-T
i Papio_ursinus.k141_3428135                             I 1 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9027  6 -     78924 T-------C-T-TTT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 1 I 5
s Perodicticus_ibeanus.k141_855320                            4842  1 +     13100 --------------T
i Perodicticus_ibeanus.k141_855320                       C 0 I 4
s Perodicticus_potto.k141_1092580                             3210  1 +     25941 --------------T
i Perodicticus_potto.k141_1092580                        C 0 I 4
s Perognathus_longimembris.PerPac_flattened_line_34437       25459  5 +     32600 C-------T-T-T-T
i Perognathus_longimembris.PerPac_flattened_line_34437   I 1 I 8
s Petromus_typicus.PetTyp_scaffold_42190                     26200  3 -     29689 ----------T-T-G
i Petromus_typicus.PetTyp_scaffold_42190                 I 2 I 4
s Phocoena_phocoena.PhoPho_flattened_line_24159               8712  3 +     63832 ----------T-T-T
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 4
s Piliocolobus_badius.k141_1234363                           38815  5 +     62158 A-------T-T-T-T
i Piliocolobus_badius.k141_1234363                       I 1 C 0
s Piliocolobus_gordonorum.k141_381342                        33537  5 +     89929 A-------T-T-T-T
i Piliocolobus_gordonorum.k141_381342                    I 1 C 0
s Piliocolobus_kirkii.k141_448987                            34953  5 +     51399 A-------T-T-T-T
i Piliocolobus_kirkii.k141_448987                        I 1 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14291189  5 -  14605196 a-------t-t-t-t
i Piliocolobus_tephrosceles.PDMG02000141.1               I 1 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              628  2 +     22620 ------------T-T
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 1 I 4
s Platanista_gangetica.PlaMin_flattened_line_32310           34418  3 +     35617 ----------T-T-T
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 I 4
s Pongo_abelii.CM009266.2                                189126238  5 + 189387572 t-------t-t-t-t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9565844  5 +   9816681 T-------T-T-T-T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68464  5 -     81375 A-------T-T-T-T
i Presbytis_comata.k141_677006                           I 1 C 0
s Presbytis_mitrata.k141_1087752                               285  5 +     19060 A-------T-T-T-T
i Presbytis_mitrata.k141_1087752                         I 1 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 10178  5 -     22811 T-------C-T-G-C
i Procavia_capensis.ProCapCap_scaffold_85530             I 1 I 4
s Prolemur_simus.MPIZ01000396.1                            2592536  6 -   4620579 c-------ttt-t-t
i Prolemur_simus.MPIZ01000396.1                          I 1 I 4
s Propithecus_coquerelli.NW_012148875.1                     986552  2 +   2598838 ------------t-t
i Propithecus_coquerelli.NW_012148875.1                  I 3 I 5
s Propithecus_coronatus.k141_347390                          24841  2 +     38485 ------------T-T
i Propithecus_coronatus.k141_347390                      I 3 I 5
s Propithecus_diadema.k141_357118                             1002  2 +      4256 ------------T-T
i Propithecus_diadema.k141_357118                        I 3 I 5
s Propithecus_edwardsi.k141_1176054                          22360  2 +     35766 ------------T-T
i Propithecus_edwardsi.k141_1176054                      I 3 I 5
s Propithecus_perrieri.k141_1200571                            543  2 -     24134 ------------T-T
i Propithecus_perrieri.k141_1200571                      I 3 I 5
s Propithecus_tattersalli.k141_790011                        24355  2 -     67325 ------------T-T
i Propithecus_tattersalli.k141_790011                    I 3 I 5
s Propithecus_verreauxi.k141_956661                            600  2 -      6182 ------------T-T
i Propithecus_verreauxi.k141_956661                      I 3 I 5
s Pteronotus_parnellii.KE909381.1                            11401  6 -     21811 t-------c-ttt-t
i Pteronotus_parnellii.KE909381.1                        I 1 I 4
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36856  6 +     42204 T-------C-T-TTT
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 1 I 4
s Pteropus_alecto.KB030862.1                              22973864  2 +  28871421 ------------T-T
i Pteropus_alecto.KB030862.1                             C 0 I 4
s Pteropus_vampyrus.KN534172.1                                1801  2 -      8028 ------------T-T
i Pteropus_vampyrus.KN534172.1                           C 0 I 4
s Puma_concolor.QAVW01001104.1                            20270456  4 -  38429054 t-------c-c-t--
i Puma_concolor.QAVW01001104.1                           I 1 I 5
s Pygathrix_cinerea.k141_1153803                             10296  5 -     91421 A-------T-T-T-T
i Pygathrix_cinerea.k141_1153803                         I 1 C 0
s Pygathrix_nigripes_b.ctg100                                 7604424  5 +   7812017 A-------T-T-T-T
i Pygathrix_nigripes_b.ctg100                               I 1 C 0
s Pygathrix_nigripes_a.k141_215492                             10265  5 -     72585 A-------T-T-T-T
i Pygathrix_nigripes_a.k141_215492                         I 1 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5089  3 +     55207 ----------T-T-T
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 4
s Rhinolophus_sinicus.LVEH01000134.1                        367005  6 -   3329780 t-------ctt-t-t
i Rhinolophus_sinicus.LVEH01000134.1                     I 1 I 4
s Rhinopithecus_bieti.k119_217274                             1980  5 -     11128 A-------T-T-T-T
i Rhinopithecus_bieti.k119_217274                        I 1 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91231335  5 - 195417433 a-------t-t-t-t
i Rhinopithecus_roxellana.NC_044550.1                    I 1 C 0
s Rhinopithecus_strykeri.ctg102                            7666984  5 +   7961872 A-------T-T-T-T
i Rhinopithecus_strykeri.ctg102                          I 1 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84853  2 -     96226 ------------T-T
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 4
s Saiga_tatarica.SaiTat_scaffold_373180                       3740  3 +      4321 ----------C-T-T
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 I 4
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151540  1 -    313613 T--------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 1 I 2
s Semnopithecus_entellus.k141_11662                          14808  5 -     19888 A-------T-T-T-T
i Semnopithecus_entellus.k141_11662                      I 1 C 0
s Semnopithecus_hypoleucos.k141_1615806                      22010  5 +     39453 A-------T-T-T-T
i Semnopithecus_hypoleucos.k141_1615806                  I 1 C 0
s Semnopithecus_johnii.k141_670120                            2536  5 +     27826 A-------T-T-T-T
i Semnopithecus_johnii.k141_670120                       I 1 C 0
s Semnopithecus_priam.k141_638794                             2057  5 -     19483 A-------T-T-T-T
i Semnopithecus_priam.k141_638794                        I 1 C 0
s Semnopithecus_schistaceus.k141_1584426                      2119  5 +      7198 A-------T-T-T-T
i Semnopithecus_schistaceus.k141_1584426                 I 1 C 0
s Semnopithecus_vetulus.k141_1200928                         10379  5 +     15514 A-------T-T-T-T
i Semnopithecus_vetulus.k141_1200928                     I 1 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187851  5 -    191337 T-------C-T-T-T
i Solenodon_paradoxus.SolPar_flattened_line_5840         I 1 I 4
s Sorex_araneus.JH798187.1                                13647393  5 -  18376816 T-------T-C-C-T
i Sorex_araneus.JH798187.1                               I 1 I 6
s Spermophilus_dauricus.KZ294078.1                         1948401  5 -   3870691 C-------T-T-C-T
i Spermophilus_dauricus.KZ294078.1                       I 1 I 4
s Spilogale_gracilis.SpiGra_flattened_line_13525             27394  6 +     97271 T-------C-T-TTG
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 1 I 4
s Suricata_suricatta.SurSur_flattened_line_6629              14381  6 -    196729 T-------C-T-TTT
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 I 9
s Sus_scrofa.CM000828.4                                   62882644  3 -  69701581 ----------t-t-t
i Sus_scrofa.CM000828.4                                  C 0 I 4
s Symphalangus_syndactylus.tarseq_199                      1088564  5 -   1523678 T-------T-T-T-T
i Symphalangus_syndactylus.tarseq_199                    I 1 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 7005  2 +     41958 ------------T-T
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 3
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69657  6 +    116680 C-------A-TCT-T
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 1 I 4
s Tapirus_indicus.TapInd_scaffold_9301                      115392  1 -    156842 --------------T
i Tapirus_indicus.TapInd_scaffold_9301                   I 3 I 3
s Tapirus_terrestris.TapTer_scaffold_755                    383847  1 +    539355 --------------T
i Tapirus_terrestris.TapTer_scaffold_755                 I 3 I 3
s Tarsius_lariang.k141_2201908                               10838  5 +     70052 C-------T-T-T-T
i Tarsius_lariang.k141_2201908                           I 1 I 4
s Tarsius_wallacei.k141_780063                               15143  5 +     25099 C-------T-T-T-T
i Tarsius_wallacei.k141_780063                           I 1 I 4
s Theropithecus_gelada.CM009954.1                        186423382  5 + 186847797 a-------t-t-t-t
i Theropithecus_gelada.CM009954.1                        I 1 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103534  3 +    114563 ----------t-t-t
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 2 I 100
s Tolypeutes_matacus.TolMat_scaffold_228639                   2046  5 +      8208 T-------C-T-C-T
i Tolypeutes_matacus.TolMat_scaffold_228639              I 1 I 4
s Tonatia_saurophila.TonSau_scaffold_294                     79149  6 +    610378 T-------C-TTT-T
i Tonatia_saurophila.TonSau_scaffold_294                 I 1 I 4
s Trachypithecus_auratus.k141_722599                          6110  5 -     20410 A-------T-T-T-T
i Trachypithecus_auratus.k141_722599                     I 1 C 0
s Trachypithecus_crepusculus.k141_1194022                    10306  5 +     15221 A-------T-T-T-T
i Trachypithecus_crepusculus.k141_1194022                I 1 C 0
s Trachypithecus_cristatus.k141_580354                        6211  5 +     19930 A-------T-T-T-T
i Trachypithecus_cristatus.k141_580354                   I 1 C 0
s Trachypithecus_francoisi.k141_1412647                       2641  5 -     19997 A-------T-T-T-T
i Trachypithecus_francoisi.k141_1412647                  I 1 C 0
s Trachypithecus_geei.k141_277701                            42760  5 -     60166 A-------T-T-T-T
i Trachypithecus_geei.k141_277701                        I 1 C 0
s Trachypithecus_germaini.k141_912491                        10233  5 -     27529 A-------T-T-T-T
i Trachypithecus_germaini.k141_912491                    I 1 C 0
s Trachypithecus_hatinhensis.k141_143409                     10173  5 -     18194 A-------T-T-T-T
i Trachypithecus_hatinhensis.k141_143409                 I 1 C 0
s Trachypithecus_laotum.k141_907409                           3908  5 -     21137 A-------T-T-T-T
i Trachypithecus_laotum.k141_907409                      I 1 C 0
s Trachypithecus_leucocephalus.k141_587342                    2611  5 -     10723 A-------T-T-T-T
i Trachypithecus_leucocephalus.k141_587342               I 1 C 0
s Trachypithecus_melamera.k141_434728                         1763  5 +      9834 A-------T-T-T-T
i Trachypithecus_melamera.k141_434728                    I 1 C 0
s Trachypithecus_obscurus.k141_190785                        20081  5 +     32220 A-------T-T-T-T
i Trachypithecus_obscurus.k141_190785                    I 1 C 0
s Trachypithecus_phayrei.ctg124                            5934178  5 +   6242583 A-------T-T-T-T
i Trachypithecus_phayrei.ctg124                          I 1 C 0
s Trachypithecus_pileatus.k141_2007326                        3425  5 +     20839 A-------T-T-T-T
i Trachypithecus_pileatus.k141_2007326                   I 1 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    855  3 -      1748 ----------T-T-T
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 I 4
s Tupaia_chinensis.KB320699.1                              2150584 12 +   4065304 tttcttttt-t-t-t
i Tupaia_chinensis.KB320699.1                            I 1 I 4
s Tupaia_tana.TupTan_flattened_line_97126                     3889  5 -     10553 T-------T-T-T-C
i Tupaia_tana.TupTan_flattened_line_97126                I 1 I 4
s Tursiops_truncatus.MRVK01000835.1                       15737912  3 +  33153633 ----------t-t-t
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 4
s Uropsilus_gracilis.UroGra_scaffold_97021                    2107  5 -      4736 C-------C-T-T-G
i Uropsilus_gracilis.UroGra_scaffold_97021               I 1 I 18
s Ursus_maritimus.KK499267.1                               4847097  8 -   5085361 ttt-----t-t-ttt
i Ursus_maritimus.KK499267.1                             I 1 I 4
s Varecia_rubra.k141_590885                                   7229  1 +     50397 C--------------
i Varecia_rubra.k141_590885                              I 1 I 4
s Varecia_variegata.k141_1128296                              7277  1 +     24756 C--------------
i Varecia_variegata.k141_1128296                         I 1 I 4
s Vicugna_pacos.KN270157.1                                 5368590  5 -   5488506 a-------t-t-t-t
i Vicugna_pacos.KN270157.1                               I 1 I 4
s Vulpes_lagopus.VulLag_flattened_line_30954                  7566  6 -     43706 T-------C-T-TTT
i Vulpes_lagopus.VulLag_flattened_line_30954             I 1 I 4
s Xerus_inauris.XerIna_scaffold_48378                        19902  5 -     24430 C-------T-T-C-T
i Xerus_inauris.XerIna_scaffold_48378                    I 1 I 4
s Zalophus_californianus.ZalCal_flattened_line_63728          2019  6 +      2932 T-------C-T-TCT
i Zalophus_californianus.ZalCal_flattened_line_63728     I 1 I 4
s Zapus_hudsonius.ZapHud_scaffold_11398                      10172  5 +     63895 G-------T-T-T-T
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 1 I 5
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11604  3 +     12536 ----------T-T-T
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 I 4
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lepilemur_septentrionalis.k141_185316                      22934  4 +     54090 I
e Lepilemur_ruficaudatus.k141_582783                           754 56 -      1589 I
e Lepilemur_dorsalis.k141_577674                             24879  4 +     45836 I
e Lepilemur_ankaranensis.k141_596936                          6932  4 -     23766 I
e Kogia_breviceps.KogBre_flattened_line_192630                1875  2 -      3359 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galagoides_demidoff.k141_31856                              3217  0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1810 17 +     62944 A-T-----ATTATT-CC-T-------GTGA---TC
s Acinonyx_jubatus.LLWD01001279.1                           823451 17 -   1699592 a-t-----attGTC-CT-A-------ATGA---AG
i Acinonyx_jubatus.LLWD01001279.1                        I 5 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507171 18 -  29979442 a-t-----actgtcCTT-C-------ATGA---GT
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 4 C 0
s Ailurus_fulgens.LNAC01001112.1                             75392 18 -    347723 a-t-----attgcCCCT-A-------ATGA---GT
i Ailurus_fulgens.LNAC01001112.1                         I 4 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     65161 17 -     89534 A-T-----GTTGCC-CT-T-------AGGA---GC
i Allactaga_bullata.AllBul_scaffold_9566                 I 5 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9810 17 -     52922 A-T-----ATTGTT-CC-T-------GTGA---TC
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9743 17 -     28001 A-T-----ATTGTT-CC-T-------GTGA---TC
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                           189 17 -     18505 A-T-----ATTGTT-CC-T-------GTGA---TC
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           1038 17 -     12518 A-T-----ATTGTT-CC-T-------GTGA---TC
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675351 17 -   2318259 a-t-----attgtc-cC-TA-------TGA---TC
i Ammotragus_lervia.NIVO01071767.1                       I 4 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183297 18 +    412891 A-T-----ATTGTC-CC-T--G----ATGA---AT
i Anoura_caudifer.AnoCau_scaffold_1412                   I 3 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97806 10 -    100397 A-T-----ATTGTC-CC------------------
i Antilocapra_americana.AntAmePen_scaffold_12469         I 4 I 6
s Aplodontia_rufa.AprRuf_scaffold_68852                       7454 17 +     20879 G-T-----TCTCCT-CC-A-------CTGA---GC
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 4 C 0
s Arctocebus_calabarensis.k141_288239                        14611 17 +     17124 A-T-----ATTGTC-CC-T-------ATGA---AC
i Arctocebus_calabarensis.k141_288239                    I 4 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2654 18 +     43469 A-T-----ATTGTC-CC-T--G----ATGA---AC
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 4 C 0
s Avahi_laniger.k141_765380                                  49488 17 -     92717 A-T-----ATTATC-CT-T-------ATGA---AC
i Avahi_laniger.k141_765380                              I 5 C 0
s Avahi_peyrierasi.k141_1424874                              50113 17 +     85213 A-T-----ATTATC-CT-T-------ATGA---AC
i Avahi_peyrierasi.k141_1424874                          I 5 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191776 18 +  23207421 a-t-----attgtc-cc-TA------ATGA---GC
i Balaenoptera_acutorostrata.KI537508.1                  I 4 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2241 18 -     18090 a-t-----attgtc-cc-TA------ATGA---GC
i Balaenoptera_bonaerensis.DF707048.1                    I 4 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26273 17 +     34529 A-T-----ATTGTC-CC-T--G-----TGA---TC
i Beatragus_hunteri.BeaHun_scaffold_50177                I 4 C 0
s Bison_bison.KN261452.1                                    199315 17 -    288883 a-t-----attgtc-cc-TA-------TGA---GC
i Bison_bison.KN261452.1                                 I 4 C 0
s Bos_indicus.CM003047.1                                  20272520 17 +  48749331 a-t-----attgtc-cc-T------N-TGA---GC
i Bos_indicus.CM003047.1                                 I 4 C 0
s Bos_mutus.JH880303.1                                     1125076 17 -   1948126 a-t-----attgtc-cc-TA-------TGA---GC
i Bos_mutus.JH880303.1                                   I 4 C 0
s Bos_taurus.CM000203.6                                   18083158 17 +  45695690 a-t-----attgtc-cc-T-----C--TGA---GC
i Bos_taurus.CM000203.6                                  I 4 C 0
s Bubalus_bubalis.KI419123.1                               2818822 17 +   4408762 a-t-----attgtc-cc-TA-------TGA---GC
i Bubalus_bubalis.KI419123.1                             I 179 C 0
s Camelus_bactrianus.KN276810.1                            9999108 19 -  17673402 a-t-----attgtc-cC-TA--A---ATGA---GC
i Camelus_bactrianus.KN276810.1                          I 4 C 0
s Camelus_dromedarius.KN272107.1                           2331572 19 -   7040546 a-t-----attgtc-cC-TA--A---ATGA---GC
i Camelus_dromedarius.KN272107.1                         I 4 C 0
s Camelus_ferus.KB017975.1                                  399848 19 -   1652518 a-t-----attgtc-cC-TA--A---ATGA---GC
i Camelus_ferus.KB017975.1                               I 4 C 0
s CanFam4.chr16                                           17795952 18 -  60362399 A-A-----ATTATCCCT-A-------ATGA---GT
i CanFam4.chr16                                          I 4 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182009 18 -    185531 A-A-----ATTATCCCT-A-------ATGA---GT
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 4 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031396 18 -   9314153 a-a-----attatccct-a-------ATGA---GT
i Canis_lupus_dingo.QKWQ01000480.1                       I 4 C 0
s Canis_lupus_familiaris.chr16                            17955660 18 -  59632846 a-a-----attatccct-a-------ATGa---gt
i Canis_lupus_familiaris.chr16                           I 4 C 0
s Canis_lupus_orion.HG994398.1                            18496961 18 +  63665305 a-a-----attatccct-a-------ATGA---GT
i Canis_lupus_orion.HG994398.1                           I 4 C 0
s Capra_aegagrus.CM003241.1                               18829469 17 +  46296322 a-t-----attgtc-cc-TA-------TGA---TC
i Capra_aegagrus.CM003241.1                              I 4 C 0
s Capra_hircus.CM004588.1                                 18060189 17 -  44709034 a-t-----attgtc-cc-TA-------TGA---TC
i Capra_hircus.CM004588.1                                I 4 C 0
s Carlito_syrichta.NW_007259797.1                           141233 17 -    496798 a-t-----attGTC-CC-T-------ATGA---TT
i Carlito_syrichta.NW_007259797.1                        I 5 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                3071 18 -     11696 A-T-----ATTGTC-CC-T--G----ATGA---AC
i Carollia_perspicillata.CarPer_scaffold_92756           I 4 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133829 16 +    179628 A-T-----GTTGCC-CC-T--------AGA---GC
i Castor_canadensis.CasCan_scaffold_2074                 I 4 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89434 18 +    217609 A-T-----ATTGTC-CC-GA------GTGA---GC
i Catagonus_wagneri.CatWag_scaffold_2839                 I 4 C 0
s Cavia_aperea.AVPZ01000300.1                             18347831 17 -  23392119 A-T-----ATGGTG-CC-T-------GTGA---GC
i Cavia_aperea.AVPZ01000300.1                            I 4 C 0
s Cavia_porcellus.DS562891.1                              18360091 17 -  23407841 A-T-----ATGGTG-CC-T-------GTGA---GC
i Cavia_porcellus.DS562891.1                             I 4 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98965 17 +    143979 A-T-----ATGGTG-CC-T-------GTGA---GC
i Cavia_tschudii.CavTsc_scaffold_8919                    I 4 C 0
s Cephalopachus_bancanus.k141_2037105                         5148 17 -      8605 A-T-----ATTGTC-CC-T-------ATGA---TT
i Cephalopachus_bancanus.k141_2037105                    I 4 C 0
s Ceratotherium_simum.JH767749.1                          12228067 18 +  27778364 a-t-----attgtc-ccTA-------ATGA---GC
i Ceratotherium_simum.JH767749.1                         I 4 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2785 18 -      3715 A-T-----ATTGTC-CCTA-------ATGA---GC
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     I 4 C 0
s Cercocebus_atys.KQ010504.1                               4470770 17 +   4669795 a-t-----attgct-cC-T-------GTGA---TC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         9319 17 -     19203 A-T-----ATTGCT-CC-T-------GTGA---TC
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3740 17 +      8260 A-T-----ATTGCT-CC-T-------GTGA---TC
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3968 17 +     27781 A-T-----ATTGCT-CC-T-------GTGA---TC
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         4126 17 -     20310 A-T-----ATTGTT-CC-T-------GTGA---TC
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           7110 17 +     29689 A-T-----ATTGTT-CC-T-------GTGA---TC
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            1548 17 +      9989 A-C-----ATTGTT-CC-T-------GTGA---TC
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9794 17 -     27936 A-T-----ATTGTT-CC-T-------GTGA---TC
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9820 17 -     11289 A-T-----ATTGTT-CC-T-------GTGA---TC
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38812192 17 +  39242232 A-T-----ATTGTT-CC-T-------GTGA---TC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217891 17 -  21565898 A-T-----ATTGTT-CC-T-------GTGA---TC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       35006 17 -     53127 A-T-----ATTGTT-CC-T-------GTGA---TC
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        2295 17 +      7159 A-T-----ATTGTT-CC-T-------GTGA---TC
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9813 17 -     27947 A-T-----ATTGTT-CC-T-------GTGA---TC
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9789 17 +     17596 A-T-----ATTGTT-CC-T-------GTGA---TC
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         40289 17 -     41420 A-T-----ATTGTT-CC-T-------GTGA---TC
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4994  3 -      6351 A-T-----A--------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       I 4 C 0
s Cheirogaleus_major.k141_333249                             16904 17 -     52598 A-T-----ATTATC-CT-T-------ATGA---AC
i Cheirogaleus_major.k141_333249                         I 6 C 0
s Cheirogaleus_medius.k141_1055463                           12254 17 +     57038 A-T-----ATTATC-CT-T-------ATGA---AC
i Cheirogaleus_medius.k141_1055463                       I 6 C 0
s Chinchilla_lanigera.JH722012.1                           1251188 17 +   2543920 A-T-----ACGGTG-CC-T-------ATGA---GC
i Chinchilla_lanigera.JH722012.1                         I 4 C 0
s Chlorocebus_aethiops.ctg25                              18423752 17 -  18827391 A-T-----ATTGTT-CC-T-------GTGA---TC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       10195 17 -     50209 A-T-----ATTGTT-CC-T-------GTGA---TC
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135417201 17 + 135778131 a-t-----attgtt-cc-t-------GTGA---TC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15358 16 +     19366 A-T-----ATTGCC-CC-T-------CTGG---G-
i Choloepus_didactylus.ChoDid_scaffold_45914             I 4 C 0
s Choloepus_hoffmanni.KN194906.1                            170457 16 +    839153 a-t-----attgcc-CC-T-------CTGG---G-
i Choloepus_hoffmanni.KN194906.1                         I 4 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_172426               9838 17 -     10935 A-T-----ATTATT-CC-T-------GTGG---AC
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          I 11 C 0
s Colobus_angolensis.KN981557.1                            1905727 17 +   2368649 a-t-----attgtt-cc-t-------GTGA---TC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199945397 17 + 200372422 A-T-----ATTGTT-CC-T-------GTGA---TC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              32268 17 +     84244 A-T-----ATTGTT-CC-T-------GTGA---TC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17546484 17 -  53390261 a-a-----tttgCC-TT-G-------GTGA---GT
i Condylura_cristata.JH655891.1                          I 2 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10694 18 -     20389 A-T-----ACTATC-CC-TA------ATGA---GC
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 4 C 0
s Crocidura_indochinensis.CroInd_scaffold_283822              2824 17 +      4330 a-t-----atTGTT-CC-T-------ATGA---GC
i Crocidura_indochinensis.CroInd_scaffold_283822         I 13 I 18
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24400 17 -     87169 A-T-----ATTGCC-CT-A-------ATGA---AC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 5 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 3248 16 +      5455 --T-----ATGGTA-CC-T-------GTGA---GT
i Cuniculus_paca.CunPac_flattened_line_231100            I 4 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1602 13 +      3576 G-T-----ATGGGG-CC-T-------GT-------
i Dasyprocta_punctata.DasPun_flattened_line_206793       I 4 C 0
s Dasypus_novemcinctus.JH564415.1                            61266  3 +   2246927 A-C-----A--------------------------
i Dasypus_novemcinctus.JH564415.1                        I 4 C 0
s Daubentonia_madagascariensis.ctg71                      12533076 17 -  12879189 A-T-----ATTGTC-CC-T-------ATGA---AC
i Daubentonia_madagascariensis.ctg71                     I 4 C 0
s Delphinapterus_leucas.KZ290073.1                        16811411 18 +  35494412 a-t-----attgtc-cc-TA------ATGA---GC
i Delphinapterus_leucas.KZ290073.1                       I 4 C 0
s Desmodus_rotundus.KZ672289.1                             8628103 18 +  20541912 a-t-----attgtc-cc-t------gatga---ac
i Desmodus_rotundus.KZ672289.1                           I 4 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669917 18 +   1390856 a-t-----attgtc-cCTA-------ATGA---GC
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 4 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2675 18 +    198055 A-T-----ATTGTC-CCTA-------ATGA---GC
i Diceros_bicornis.DicBicMic_scaffold_5955               I 4 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34657 17 +     67921 G-G-----ATGGGG-CT-T-------ACGA---GC
i Dinomys_branickii.DinBra_scaffold_21862                I 4 C 0
s Dipodomys_ordii.KN672350.1                              18895975 24 +  37912305 G-T-----ATGGCC-CA-TATGAGCACTGA---GC
i Dipodomys_ordii.KN672350.1                             I 4 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  12193 24 +     14536 G-T-----ATGGCC-CA-TATGAGCACTGA---GC
i Dipodomys_stephensi.DipSte_scaffold_75855              I 4 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31848 13 -     42551 A-T-----ATGGTG-AC-T-------GT-------
i Dolichotis_patagonum.DolPat_scaffold_30833             I 4 C 0
s Eidolon_helvum.KE759718.1                                   7601 18 +     11740 a-t-----tttgtc-cc-TA------ATGA---GC
i Eidolon_helvum.KE759718.1                              I 4 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310476 17 +    607251 a-t-----attgtt-cc-tA-------TGA---GC
i Elaphurus_davidianus.JRFZ01104969.1                    I 4 C 0
s Elephantulus_edwardii.JH947257.1                         1089193 25 +  10337057 A-AATACGATTGTC-CC-T-------GTGACATGT
i Elephantulus_edwardii.JH947257.1                       I 4 C 0
s Enhydra_lutris.KZ291758.1                               16325957 18 -  41312741 a-t-----attgtCCCT-A-------ATGA---GT
i Enhydra_lutris.KZ291758.1                              I 4 C 0
s Eptesicus_fuscus.JH977646.1                              2144254 18 -  14770903 a-t-----attgtc-cc-TA------Atga---ac
i Eptesicus_fuscus.JH977646.1                            I 4 C 0
s Equus_asinus.JREZ01000139.1                              1279954 18 +   4378816 a-t-----attgtc-cCTA-------ATGA---GC
i Equus_asinus.JREZ01000139.1                            I 4 C 0
s Equus_caballus.CM000403.2                               18527775 18 -  39960074 a-t-----attgtc-cCTA-------ATGA---GC
i Equus_caballus.CM000403.2                              I 4 C 0
s Equus_przewalskii.KK951119.1                               29790 18 +    498745 a-t-----attgtc-cCTA-------ATGA---GC
i Equus_przewalskii.KK951119.1                           I 4 C 0
s Erinaceus_europaeus.JH835339.1                           3325493 16 -   7059049 --A-----ATTGTC-CC-T-------ATCA---GC
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21200383 17 -  21539334 A-T-----ATTGTT-CC-T-------GTGA---TC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11087 18 +    133382 A-T-----ATTGTC-CC-TA------ATGA---GC
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 4 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             25024 18 -     44125 A-T-----ATTGTC-CC-TA------ATGA---GC
i Eubalaena_japonica.EubJap_flattened_line_31514         I 4 C 0
s Eulemur_albifrons.k141_342033                               9584 17 -     14127 A-T-----ATTATC-CT-T-------AAGA---AC
i Eulemur_albifrons.k141_342033                          I 4 C 0
s Eulemur_collaris.k141_377015                                2282 17 -     16928 A-T-----ATTATC-CT-T-------AAGA---AC
i Eulemur_collaris.k141_377015                           I 4 C 0
s Eulemur_coronatus.k141_885031                              11315 17 -     25546 A-T-----ATTATC-CT-T-------AAGA---AC
i Eulemur_coronatus.k141_885031                          I 4 C 0
s Eulemur_flavifrons.k141_1184614                             8500 17 +     26330 A-T-----ATTATC-CT-T-------AAGA---AC
i Eulemur_flavifrons.k141_1184614                        I 4 C 0
s Eulemur_fulvus.k141_544389                                  9757 17 +     23973 A-T-----ATTATC-CT-T-------AAGA---AC
i Eulemur_fulvus.k141_544389                             I 4 C 0
s Eulemur_macaco.k141_1562045                                 8500 17 +     75513 A-T-----ATTATC-CT-T-------AAGA---AC
i Eulemur_macaco.k141_1562045                            I 4 C 0
s Eulemur_mongoz.k141_232305                                  6452 17 +     97555 A-T-----ATTATC-CT-T-------AAGA---AC
i Eulemur_mongoz.k141_232305                             I 4 C 0
s Eulemur_rubriventer.k141_571033                             9378 17 +     26496 A-T-----ATTATC-CT-T-------AAGA---AC
i Eulemur_rubriventer.k141_571033                        I 4 C 0
s Eulemur_rufus.k141_2367191                                  2395 17 +      2552 A-T-----ATTATC-CT-T-------AAGA---AC
i Eulemur_rufus.k141_2367191                             I 4 N 0
s Eulemur_sanfordi.k141_1122526                               9563 17 +    111500 A-T-----ATTATC-CT-T-------AAGA---AC
i Eulemur_sanfordi.k141_1122526                          I 4 C 0
s Felis_catus.CM001381.2                                  20233321 17 + 206538554 a-t-----attGTC-CT-A-------ATGA---AG
i Felis_catus.CM001381.2                                 I 5 C 0
s Felis_catus_fca126.CM031415.1                           20192151 17 + 205367284 a-t-----attGTC-CT-A-------ATGA---AG
i Felis_catus_fca126.CM031415.1                          I 5 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  5676 17 -     36744 A-T-----ATTGTC-CT-A-------ATGA---AA
i Felis_nigripes.FelNig_flattened_line_20823             I 5 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25640 17 +     26054 A-T-----ATTGTC-CT-C-------ATGA---GT
i Galeopterus_variegatus.GalVar_scaffold_56069           I 4 C 0
s Glis_glis.GliGli_scaffold_19807                            30530 17 +     49224 G-T-----ATTGCC-CC-T-------CTGA---GC
i Glis_glis.GliGli_scaffold_19807                        I 4 C 0
s Gorilla_beringei.k141_3596273                              11045 17 -     32273 A-T-----ATTATT-CC-T-------GTGA---TC
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186333193 17 + 186649187 a-t-----attatt-cc-t-------GTGA---TC
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   30254 17 +     78134 A-T-----ATTGCC-CC-T-------TTAA---GT
i Graphiurus_murinus.GraMur_scaffold_10447               I 4 C 0
s Hapalemur_alaotrensis.k141_170648                           2649 17 -     19426 A-T-----ATTATC-CT-T-------AAGA---AC
i Hapalemur_alaotrensis.k141_170648                      I 4 C 0
s Hapalemur_gilberti.k141_488810                              7793 17 -     15286 A-T-----ATTATC-CT-T-------AAGA---AC
i Hapalemur_gilberti.k141_488810                         I 4 C 0
s Hapalemur_griseus.k141_1511508                              9431 17 +     18253 A-T-----ATTATC-CT-T-------AAGA---AC
i Hapalemur_griseus.k141_1511508                         I 4 C 0
s Hapalemur_meridionalis.k141_248335                          9534 17 -     41752 A-T-----ATTATC-CT-T-------AAGA---AC
i Hapalemur_meridionalis.k141_248335                     I 4 C 0
s Hapalemur_occidentalis.k141_907772                          9367 17 -     16460 A-T-----ATTATC-CT-T-------AAGA---AC
i Hapalemur_occidentalis.k141_907772                     I 4 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238320 14 +    327341 T-G-----ATTGCC-CT-A-------ATA------
i Helogale_parvula.HelPar_flattened_line_2585            I 5 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17673 17 +     36099 A-T-----ATTGTC-CC-TA-------TGA---TC
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 4 C 0
s Heterocephalus_glaber.JH602082.1                        20659752 17 +  22651954 A-T-----ATGATC-CT-T-------ATGC---AC
i Heterocephalus_glaber.JH602082.1                       I 4 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 438 17 +       961 A-T-----ACTACC-CC-T-------GTGA---AC
i Heterohyrax_brucei.HetBruBak_scaffold_383740           I 4 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112224 18 +    128679 A-T-----ATTGTC-CC-TA------ATGA---GC
i Hippopotamus_amphibius.HipAmp_scaffold_9076            I 4 C 0
s Hipposideros_armiger.JXIK01000431.1                       108470 18 +   1711038 a-t-----attgtC-CC-TA------ATGA---GC
i Hipposideros_armiger.JXIK01000431.1                    I 4 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39911 18 +     43066 A-T-----ATTGCC-CC-TA------ATGA---GC
i Hipposideros_galeritus.HipGal_scaffold_29171           I 4 C 0
s Hoolock_leuconedys.ctg274                                    429939 18 +    630532 TAT-----ATTATT-CC-T-------GTGA---TC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40790 17 +     55795 T-T-----ATTGCC-CT-A-------ACAA---AC
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 7 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20220 17 -    143317 A-T-----ATGGTG-CC-T-------GTGA---GC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 4 C 0
s Hylobates_agilis.k141_307679                               12870 18 -     15490 AAT-----ATTATT-CC-T-------GTGA---TC
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              54875 18 +     67168 AAT-----ATTATT-CC-T-------GTGA---TC
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189538525 18 - 191637585 AAT-----ATTATT-CC-T-------GTGA---TC
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3331418 18 -  11177569 AAT-----ATTATT-CC-T-------GTGA---TC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      81316 17 +    135385 A-C-----ATTGTC-CC-T-------ATGA---GC
i Hystrix_cristata.HysCri_scaffold_5660                  I 4 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514772 17 -   7955117 g-T-----ATTGCT-CC-T-------CTGA---TC
i Ictidomys_tridecemlineatus.JH393364.1                  I 4 C 0
s Indri_indri.k141_3655594                                   18350 17 +     31101 A-T-----ATTATC-CT-T-------ATGA---AC
i Indri_indri.k141_3655594                               I 5 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22628 18 +     23964 A-T-----ATTGTC-CC-TA------ATGA---GC
i Inia_geoffrensis.IniGeo_flattened_line_48101           I 4 C 0
s Jaculus_jaculus.JH725527.1                               8271555 17 -   9596543 A-T-----GTTTCC-TT-T-------AGGA---GC
i Jaculus_jaculus.JH725527.1                             I 5 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    12663 18 -     42476 A-T-----ATTGTC-CC-TA------ATGA---AC
i Lasiurus_borealis.LasBor_scaffold_32767                I 4 C 0
s Lemur_catta.scaffold_24                                 15519893 17 -  30322482 A-T-----ATTATC-CT-T-------AAGA---AC
i Lemur_catta.scaffold_24                                I 4 C 0
s Leptonychotes_weddellii.KB714746.1                       3036290 18 +   3914936 a-t-----attgtccCT-A-------ATGA---GT
i Leptonychotes_weddellii.KB714746.1                     I 4 C 0
s Lipotes_vexillifer.KE559953.1                             267680 18 -    662738 a-t-----attgtc-cc-TA------ATGA---GC
i Lipotes_vexillifer.KE559953.1                          I 4 C 0
s Lophocebus_aterrimus.ctg367                              1432314 17 +   1826925 A-T-----ATTGTT-CC-T-------GTGA---TC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             872 17 +     11245 A-T-----ATTGTT-TC-T-------ATGA---AC
i Loris_lydekkerianus.k141_2539221                       I 4 C 0
s Loris_tardigradus.ctg83                                   999709 17 +   6120653 A-T-----ATTGTT-TC-T-------ATGA---AC
i Loris_tardigradus.ctg83                                I 5 C 0
s Loxodonta_africana.GL010049.1                            4214709 17 -  43346337 A-T-----ATTATC-CC-T-------GTGG---AT
i Loxodonta_africana.GL010049.1                          I 4 C 0
s Lycaon_pictus.CM007581.1                                17951900 18 -  59628241 a-a-----attatccct-a-------ATGa---gt
i Lycaon_pictus.CM007581.1                               I 4 C 0
s Macaca_arctoides.k141_2326796                               2135 17 +     40492 A-T-----ATTGTT-CC-T-------GTGA---TC
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59671390 17 +  60120075 A-T-----ATTGTT-CC-T-------GTGA---TC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7890 17 -     26193 A-T-----ATTGTT-CC-T-------GTGA---TC
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75687 17 -    114318 A-T-----ATTGTT-CC-T-------GTGA---TC
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  1402 17 -     23192 A-T-----ATTGTT-CC-T-------GTGA---TC
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10855 17 -     29190 A-T-----ATTGTT-CC-T-------GTGA---TC
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  19422 17 +     37952 A-T-----ATTGTT-CC-T-------GTGA---TC
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834510 17 + 187317192 a-t-----attgtt-cc-t-------GTGA---TC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25453073 17 -  25927173 a-t-----attgtt-cc-t-------GTGA---TC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  75271 17 +     89720 A-T-----ATTGTT-CC-T-------GTGA---TC
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 2269 17 +     20474 A-T-----ATTGTT-CC-T-------GTGA---TC
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   2070 17 -     14993 A-T-----ATTGTT-CC-T-------GTGA---TC
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324942 17 -    668171 A-T-----ATTGTT-CC-T-------GTGA---TC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                  373 17 -     24072 A-T-----ATTGTT-CC-T-------GTGA---TC
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               21009 17 -     45290 A-T-----ATTGTT-CC-T-------GTGA---TC
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87710 18 +     94391 A-T-----ATTGTC-CC-TA------ATGA---GC
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 4 C 0
s Mandrillus_leucophaeus.scaffold280                      23932558 17 -  24302211 A-T-----ATTGCT-CC-T-------GTGA---TC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346735 17 +    752769 A-T-----ATTGCT-CC-T-------GTGA---TC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15777 18 +    737560 a-t-----attgtccCT-A-------ATAA---GC
i Manis_javanica.JSZB01003497.1                          I 4 C 0
s Manis_pentadactyla.KN006162.1                              47166 18 -    317179 a-t-----attgtccCT-A-------ATAA---GC
i Manis_pentadactyla.KN006162.1                          I 4 C 0
s Marmota_marmota.CZRN01000018.1                          33097622 17 -  40650429 g-T-----ATTGCT-CC-T-------CTGA---TC
i Marmota_marmota.CZRN01000018.1                         I 4 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6975 18 -    207569 A-T-----ATTGTC-CC-TA------ATGA---GC
i Megaderma_lyra.MegLyr_scaffold_4542                    I 4 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6670 18 +     13704 A-T-----ATTGTCCCT-A-------ATGA---AT
i Mellivora_capensis.MelCap_flattened_line_69365         I 4 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3296 18 +     10310 A-T-----ATTGTC-CC-GA------ATGA---GC
i Mesoplodon_bidens.MesBid_scaffold_108144               I 4 C 0
s Microcebus_murinus.CM007674.1                           18283508 17 -  93316391 a-t-----attatc-ct-t-------ATGA---AC
i Microcebus_murinus.CM007674.1                          I 7 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    15557 17 -    145209 A-C-----AGTGTC-TT-T-------GAGT---GC
i Microgale_talazaci.MicTal_scaffold_6613                I 3 I 274
s Micronycteris_hirsuta.MicHir_scaffold_52381                13614 18 -     19307 A-T-----ATTGTC-CC-T--G----ATGA---AC
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 4 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849488 18 +   8254450 a-t-----attgtC-CT-TA------ATGA---AC
i Miniopterus_natalensis.LDJU01000034.1                  I 208 T 199
s Miniopterus_schreibersii.MinSch_scaffold_18080             33165 18 +     64694 A-T-----ATTGTC-CT-TA------ATGA---AC
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 9 C 0
s Miopithecus_ogouensis.k141_534055                           4308 17 -     28506 A-T-----ATTGTT-CC-T-------GTGA---TC
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62620 18 -     63350 A-T-----ATTGTCCCT-A-------ATGA---GT
i Mirounga_angustirostris.MirAng_flattened_line_22144    I 4 C 0
s Mirza_zaza.k141_952172                                      4857 17 -     37649 A-T-----ATTATC-CT-T-------ATGA---AC
i Mirza_zaza.k141_952172                                 I 6 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26801 18 -    437263 A-T-----ATTGTC-CC-TA------ATGA---GC
i Monodon_monoceros.MonMon_M_scaffold_103                I 4 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138018 18 -    366855 A-T-----ATTGTC-CC-TA------ATGA---AC
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 4 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                    527 17 +     82753 A-T-----ATTGTC-CC-TA-------TGA---GC
i Moschus_moschiferus.MosMos_scaffold_13123              I 4 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31522 17 +     37127 A-T-----TATGCC-CT-A-------ATGA---AC
i Mungos_mungo.MunMun_flattened_line_23663               I 5 C 0
s Murina_feae.MurFea_scaffold_85699                           5313 18 +     14753 A-T-----ATTATC-CC-TA------ATGA---AC
i Murina_feae.MurFea_scaffold_85699                      I 4 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2523 17 +     14296 G-T-----ATTGCC-CC-T-------CTGA---GC
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 4 C 0
s Mustela_putorius.JH418006.1                               297855 18 -  14710649 a-t-----attgtcCCT-A-------ATGA---GT
i Mustela_putorius.JH418006.1                            I 4 C 0
s Myotis_brandtii.KE162005.1                                278485 18 -  10118263 a-t-----attgtc-cC-TA------Atga---ac
i Myotis_brandtii.KE162005.1                             I 4 C 0
s Myotis_davidii.KB100139.1                                1586040 18 -   6019432 a-t-----attgtc-cT-TA------Atga---ac
i Myotis_davidii.KB100139.1                              I 4 C 0
s Myotis_lucifugus.GL429869.1                              3902249 18 -   4330536 a-t-----attgtc-cc-TA------Atga---ac
i Myotis_lucifugus.GL429869.1                            I 4 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32809 18 +     33610 A-T-----ATTGTC-CC-TA------ATGA---AC
i Myotis_myotis.MyoMyo_scaffold_28916                    I 4 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186305 16 +    196477 A-T-----ATTCCC-GC-T-------ATGG---G-
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 4 I 1
s Nannospalax_galili.KL204047.1                            2025687 16 -   3037898 g-t-----gttgcc--C-T-------AAGA---GC
i Nannospalax_galili.KL204047.1                          I 4 C 0
s Nasalis_larvatus.k141_413338                               10308 17 +     21681 A-T-----GTTGTT-CC-T-------GTGA---TC
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865757 18 +   7148211 a-t-----attgtc-cc-T--G----ATGA---GC
i Neophocaena_asiaeorientalis.KZ687982.1                 I 4 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756576 18 +    783361 T-T-----ATTGTC-CC-TA------AGGA---AG
i Noctilio_leporinus.NocLep_scaffold_251                 I 4 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146162 18 -   9404916 a-a-----attacccct-A-------ATGA---GT
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 4 C 0
s Nycticebus_bengalensis.LG01                            102574676 17 - 196305487 A-T-----ATTATC-CC-T-------ATGA---AC
i Nycticebus_bengalensis.LG01                            I 4 C 0
s Nycticebus_coucang.k141_5327727                             2362 17 +      8486 A-T-----ATTATC-CC-T-------ATGA---AC
i Nycticebus_coucang.k141_5327727                        I 4 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105745103 17 + 199412804 A-T-----ATTGTC-CC-T-------ATGA---AC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 4 C 0
s Ochotona_princeps.JH802162.1                             1355946 17 +   3988456 a-t-----attatc-cc-A-------ACAT---Ac
i Ochotona_princeps.JH802162.1                           I 4 C 0
s Odobenus_rosmarus.KB229312.1                              500907 18 -   2017862 a-t-----attgtcCCT-A-------AAGA---GT
i Odobenus_rosmarus.KB229312.1                           I 4 C 0
s Odocoileus_virginianus.KZ100018.1                         144848 17 +    630418 a-t-----attgcc-cC-TA-------TGA---AC
i Odocoileus_virginianus.KZ100018.1                      I 4 C 0
s Orcinus_orca.KB316932.1                                  2781672 18 -  10937097 a-t-----attgtc-cc-TA------ATGA---GC
i Orcinus_orca.KB316932.1                                I 4 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               7260 17 -     18566 A-T-----ATTGTC-GC-T-------ATGG---AT
i Orycteropus_afer.OryAfe_flattened_line_144387          I 4 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458915 18 -    559221 a-a-----attatccct-a-------ATGA---GT
i Otocyon_megalotis.JAEUCK010005147.1                    I 4 C 0
s Ovis_aries.CM001607.2                                   17585204 17 +  44047080 a-t-----attgtc-cC-TA-------TGA---TC
i Ovis_aries.CM001607.2                                  I 4 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173625 17 -    191736 A-T-----ATTGTC-CC-TA-------TGA---TC
i Ovis_canadensis.OviCan_scaffold_2572                   I 4 C 0
s Pan_paniscus.KQ411613.1                                    39162 17 +     80009 a-t-----attatt-cc-t-------GTGA---TC
i Pan_paniscus.KQ411613.1                                I 1 C 0
s Pan_troglodytes.CM009242.2                             189138055 17 + 189151597 a-t-----attatt-cc-t-------GTGA---TC
i Pan_troglodytes.CM009242.2                             I 5 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  147301 17 +    230217 A-T-----ATTGTC-CT-A-------ATGA---AC
i Panthera_onca.PanOnc_flattened_line_3271               I 5 C 0
s Panthera_pardus.KV860321.1                                260010 17 +  18783137 a-t-----attGTC-CT-A-------ATGA---AC
i Panthera_pardus.KV860321.1                             I 5 C 0
s Panthera_tigris.KE722367.1                               4717157 17 -   8748460 a-t-----attGTC-CT-A-------ATGA---AC
i Panthera_tigris.KE722367.1                             I 5 C 0
s Pantholops_hodgsonii.KE114653.1                          1264558 17 -   2937107 a-t-----attgtc-cC-T--G-----TGA---TC
i Pantholops_hodgsonii.KE114653.1                        I 4 C 0
s Papio_anubis.CM001495.2                                183438343 17 + 183742232 a-t-----attgtt-cc-t-------GTGA---TC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             2036 17 +     20448 A-T-----ATTGTT-CC-T-------GTGA---TC
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20558841 17 +  20919399 A-T-----ATTGTT-CC-T-------GTGA---TC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                    779 17 +     41871 A-T-----ATTGTT-CC-T-------GTGA---TC
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     4065 17 +     27711 A-T-----ATTGTT-CC-T-------GTGA---TC
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  4150 17 +      9205 A-T-----ATTGTT-CC-T-------GTGA---TC
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9038 17 -     78924 A-T-----ATTGCC-AT-A-------ATGA---GC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 5 C 0
s Perodicticus_ibeanus.k141_855320                            4847 17 +     13100 A-T-----ATTGTC-CC-T-------ATGA---AC
i Perodicticus_ibeanus.k141_855320                       I 4 C 0
s Perodicticus_potto.k141_1092580                             3215 17 +     25941 A-T-----ATTGTC-CC-T-------ATGA---AC
i Perodicticus_potto.k141_1092580                        I 4 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25472  5 +     32600 ---------------------------TGA---GC
i Perognathus_longimembris.PerPac_flattened_line_34437   I 8 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     26207 17 -     29689 G-T-----GTTATC-CC-T-------ATGG---GC
i Petromus_typicus.PetTyp_scaffold_42190                 I 4 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8719 18 +     63832 A-T-----ATTGTC-CC-TA------ATGA---GC
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 4 C 0
s Piliocolobus_badius.k141_1234363                           38820 17 +     62158 A-T-----ATTGTT-CC-T-------GTGG---TC
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33542 17 +     89929 A-T-----ATTGTT-CC-T-------GTGG---TC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34958 17 +     51399 A-T-----ATTGTT-CC-T-------GTGG---TC
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14291194 17 -  14605196 a-t-----attgtt-cc-t-------GTGG---TC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              634 18 +     22620 A-T-----ATTGTT-CC-TA------ATGA---AC
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 4 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34425 18 +     35617 A-T-----ATTGTC-CC-TA------ATGA---GC
i Platanista_gangetica.PlaMin_flattened_line_32310       I 4 C 0
s Pongo_abelii.CM009266.2                                189126243 17 + 189387572 a-t-----attgtt-CC-T-------GTGA---TC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9565849 17 +   9816681 A-T-----ATTGTT-CC-T-------GTGA---TC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68469 17 -     81375 A-T-----ATTGTT-CC-T-------GTGA---TC
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                               290 17 +     19060 A-T-----ATTGTT-CC-T-------GTGA---TC
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 10187 17 -     22811 A-T-----ACTACC-CC-T-------GTGA---AC
i Procavia_capensis.ProCapCap_scaffold_85530             I 4 C 0
s Prolemur_simus.MPIZ01000396.1                            2592546 17 -   4620579 a-t-----attatt-ct-t-------aaGA---AC
i Prolemur_simus.MPIZ01000396.1                          I 4 C 0
s Propithecus_coquerelli.NW_012148875.1                     986559 17 +   2598838 a-t-----attatc-ct-T-------ATGA---AC
i Propithecus_coquerelli.NW_012148875.1                  I 5 C 0
s Propithecus_coronatus.k141_347390                          24848 17 +     38485 A-T-----ATTATC-CT-T-------ATGA---AC
i Propithecus_coronatus.k141_347390                      I 5 C 0
s Propithecus_diadema.k141_357118                             1009 17 +      4256 A-T-----ATTATC-CT-T-------ATGA---AC
i Propithecus_diadema.k141_357118                        I 5 C 0
s Propithecus_edwardsi.k141_1176054                          22367 17 +     35766 A-T-----ATTATC-CT-T-------ATGA---AC
i Propithecus_edwardsi.k141_1176054                      I 5 C 0
s Propithecus_perrieri.k141_1200571                            550 17 -     24134 A-T-----ATTATC-CT-T-------ATGA---AC
i Propithecus_perrieri.k141_1200571                      I 5 C 0
s Propithecus_tattersalli.k141_790011                        24362 17 -     67325 A-T-----ATTATC-CT-T-------ATGA---AC
i Propithecus_tattersalli.k141_790011                    I 5 C 0
s Propithecus_verreauxi.k141_956661                            607 17 -      6182 A-T-----ATTATC-CT-T-------ATGA---AC
i Propithecus_verreauxi.k141_956661                      I 5 C 0
s Pteronotus_parnellii.KE909381.1                            11411 18 -     21811 a-t-----attgtc-tc-T--G----ATGA---AC
i Pteronotus_parnellii.KE909381.1                        I 4 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36866 18 +     42204 A-T-----ATTGTCCCT-A-------ATGA---GT
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 4 C 0
s Pteropus_alecto.KB030862.1                              22973870 16 +  28871421 G-T-----ATTGTC-CC-TA------ATGa-----
i Pteropus_alecto.KB030862.1                             I 4 I 1
s Pteropus_vampyrus.KN534172.1                                1807 18 -      8028 G-T-----ATTGTC-CC-TA------ATGA---gc
i Pteropus_vampyrus.KN534172.1                           I 4 C 0
s Puma_concolor.QAVW01001104.1                            20270465 17 -  38429054 a-t-----attGTC-CT-A-------ATGA---AG
i Puma_concolor.QAVW01001104.1                           I 5 C 0
s Pygathrix_cinerea.k141_1153803                             10301 17 -     91421 A-T-----ATTGTT-CC-T-------GTGA---TC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7604429 17 +   7812017 A-T-----ATTGTT-CC-T-------GTGA---TC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10270 17 -     72585 A-T-----ATTGTT-CC-T-------GTGA---TC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5096 17 +     55207 A-T-----ATTGTC-CC-TA-------CGA---GC
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 4 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        367015 18 -   3329780 a-t-----attgtc-aC-TA------ATGA---GC
i Rhinolophus_sinicus.LVEH01000134.1                     I 4 C 0
s Rhinopithecus_bieti.k119_217274                             1985 17 -     11128 A-T-----ATTGTT-CC-T-------GTGA---TC
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91231340 17 - 195417433 a-t-----attgtt-cc-t-------GTGA---TC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7666989 17 +   7961872 A-T-----ATTGTT-CC-T-------GTGA---TC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84859 18 -     96226 A-T-----ATTGTC-CC-TA------ATGA---GC
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 4 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3747 17 +      4321 A-T-----ATTGTC-CC-TA-------TGA---TC
i Saiga_tatarica.SaiTat_scaffold_373180                  I 4 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151543 17 -    313613 A-T-----GTTGTC-AC-T-------AAGA---GT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 2 C 0
s Semnopithecus_entellus.k141_11662                          14813 17 -     19888 A-T-----ATTGTT-CC-T-------GTGA---TC
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      22015 17 +     39453 A-T-----ATTGTT-CC-T-------GTGA---TC
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2541 17 +     27826 A-T-----ATTGTT-CC-T-------GTGA---TC
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             2062 17 -     19483 A-T-----ATTGTT-CC-T-------GTGA---TC
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      2124 17 +      7198 A-T-----ATTGTT-CC-T-------GTGA---TC
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         10384 17 +     15514 A-T-----ATTGTT-CC-T-------GTGA---TC
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187860 17 -    191337 A-T-----ATCATC-CC-T-------GTGA---GC
i Solenodon_paradoxus.SolPar_flattened_line_5840         I 4 C 0
s Sorex_araneus.JH798187.1                                13647404 17 -  18376816 A-T-----ATTGTT-CC-T-------ATGA---GC
i Sorex_araneus.JH798187.1                               I 6 C 0
s Spermophilus_dauricus.KZ294078.1                         1948410 17 -   3870691 G-T-----ATTGCT-CC-T-------CTGA---TC
i Spermophilus_dauricus.KZ294078.1                       I 4 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27404 18 +     97271 A-T-----ATTGTCCCT-A-------ATGA---GT
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 4 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14396 17 -    196729 A-T-----ATTGCT-CT-A-------ATGA---AC
i Suricata_suricatta.SurSur_flattened_line_6629          I 9 C 0
s Sus_scrofa.CM000828.4                                   62882651 18 -  69701581 a-t-----atTGTC-CC-TA------ATGA---GC
i Sus_scrofa.CM000828.4                                  I 4 C 0
s Symphalangus_syndactylus.tarseq_199                      1088569 18 -   1523678 AAT-----ATTATT-CC-T-------GTGA---TC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 7010 18 +     41958 A-T-----ACTGTC-CC-CA------GTGA---AT
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 3 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69667 16 +    116680 A-T-----ATTCCC-CC-T-------ATGG---G-
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 4 I 1
s Tapirus_indicus.TapInd_scaffold_9301                      115396 18 -    156842 C-T-----ATCGTC-CCTA-------ATGA---GC
i Tapirus_indicus.TapInd_scaffold_9301                   I 3 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383851 18 +    539355 C-T-----ATCGTC-CCTA-------ATGA---GC
i Tapirus_terrestris.TapTer_scaffold_755                 I 3 C 0
s Tarsius_lariang.k141_2201908                               10847 17 +     70052 A-T-----ATTGTC-CC-T-------ATGA---TT
i Tarsius_lariang.k141_2201908                           I 4 C 0
s Tarsius_wallacei.k141_780063                               15152 17 +     25099 A-T-----ATTGTC-CC-T-------ATGA---TT
i Tarsius_wallacei.k141_780063                           I 4 C 0
s Theropithecus_gelada.CM009954.1                        186423387 17 + 186847797 a-t-----attgtt-cc-t-------gTGA---TC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103637 17 +    114563 G-T-----GTTATC-CC-T-------AGGA---GC
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 100 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   2055  3 +      8208 A-T-----A--------------------------
i Tolypeutes_matacus.TolMat_scaffold_228639              I 4 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     79159 18 +    610378 A-T-----ATTGTC-CC-T--G----ATGA---AC
i Tonatia_saurophila.TonSau_scaffold_294                 I 4 C 0
s Trachypithecus_auratus.k141_722599                          6115 17 -     20410 A-T-----ATTGTT-CC-T-------GTGA---TC
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    10311 17 +     15221 A-T-----ATTGTT-CC-T-------GTGA---TC
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        6216 17 +     19930 A-T-----ATTGTT-CC-T-------GTGA---TC
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2646 17 -     19997 A-T-----ATTGTT-CC-T-------GTGA---TC
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42765 17 -     60166 A-T-----ATTGTT-CC-T-------GTGA---TC
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        10238 17 -     27529 A-T-----ATTGTT-CC-T-------GTGA---TC
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     10178 17 -     18194 A-T-----ATTGTT-CC-T-------GTGA---TC
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3913 17 -     21137 A-T-----ATTGTT-CC-T-------GTGA---TC
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2616 17 -     10723 A-T-----ATTGTT-CC-T-------GTGA---TC
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1768 17 +      9834 A-T-----ATTGTT-CC-T-------GTGA---TC
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        20086 17 +     32220 A-T-----ATTGTT-CC-T-------GTGA---TC
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5934183 17 +   6242583 A-T-----ATTGTT-CC-T-------GTGA---TC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        3430 17 +     20839 A-T-----ATTGTT-CC-T-------GTGA---TC
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    862 18 -      1748 A-T-----ATTGTA-CC-TA------ATGA---GC
i Tragulus_javanicus.TraJav_scaffold_140459              I 4 C 0
s Tupaia_chinensis.KB320699.1                              2150600 17 +   4065304 a-c-----actatc-AC-T-------ATGA---AA
i Tupaia_chinensis.KB320699.1                            I 4 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     3898 17 -     10553 A-C-----ACTATC-AC-T-------ATGA---AA
i Tupaia_tana.TupTan_flattened_line_97126                I 4 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737919 18 +  33153633 a-t-----attgtc-cc-TA------ATGA---GC
i Tursiops_truncatus.MRVK01000835.1                      I 4 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   51748 17 -     77625 G-C-----TTTGTC-CC-T-------GTGA---AT
i Uropsilus_gracilis.UroGra_scaffold_12083               I 14 I 4
s Ursus_maritimus.KK499267.1                               4847109 18 -   5085361 a-t-----actgtccTT-C-------ATGA---GT
i Ursus_maritimus.KK499267.1                             I 4 C 0
s Varecia_rubra.k141_590885                                   7234 17 +     50397 A-T-----ATTATC-CT-T-------AAGA---AC
i Varecia_rubra.k141_590885                              I 4 C 0
s Varecia_variegata.k141_1128296                              7282 17 +     24756 A-T-----ATTATC-CT-T-------AAGA---AC
i Varecia_variegata.k141_1128296                         I 4 C 0
s Vicugna_pacos.KN270157.1                                 5368599 19 -   5488506 a-t-----attgtc-cC-TA--A---GTGA---GC
i Vicugna_pacos.KN270157.1                               I 4 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7576 18 -     43706 A-A-----ATTACCCCT-A-------ATGA---GT
i Vulpes_lagopus.VulLag_flattened_line_30954             I 4 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19911 17 -     24430 G-T-----ATTGCT-CC-T-------CTGA---GC
i Xerus_inauris.XerIna_scaffold_48378                    I 4 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          2029 18 +      2932 A-T-----ATTGTCCCT-A-------TTGA---GT
i Zalophus_californianus.ZalCal_flattened_line_63728     I 4 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      10182 17 +     63895 A-T-----GTTGCC-CT-T-------GGAA---GC
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 5 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11611 18 +     12536 A-T-----ATTGTC-CC-TA------ATGA---GC
i Ziphius_cavirostris.ZipCav_flattened_line_71469        I 4 C 0
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lepilemur_septentrionalis.k141_185316                      22934  4 +     54090 I
e Lepilemur_ruficaudatus.k141_582783                           754 56 -      1589 I
e Lepilemur_dorsalis.k141_577674                             24879  4 +     45836 I
e Lepilemur_ankaranensis.k141_596936                          6932  4 -     23766 I
e Kogia_breviceps.KogBre_flattened_line_192630                1875  2 -      3359 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galagoides_demidoff.k141_31856                              3217  0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1827 3 +     62944 ATT
s Acinonyx_jubatus.LLWD01001279.1                           823468 3 -   1699592 ATT
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507189 3 -  29979442 GTT
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             75410 3 -    347723 gtt
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     65178 3 -     89534 TTT
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9827 3 -     52922 ATT
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9760 3 -     28001 GTT
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                           206 3 -     18505 GTT
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           1055 3 -     12518 GTT
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675368 3 -   2318259 ATt
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 213
s Anoura_caudifer.AnoCau_scaffold_1412                      183315 3 +    412891 ATT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             97822 3 -    100397 ATT
i Antilocapra_americana.AntAmePen_scaffold_12469         I 6 I 229
s Aplodontia_rufa.AprRuf_scaffold_68852                       7471 2 +     20879 AT-
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14628 3 +     17124 ATG
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2672 3 +     43469 ATT
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  49505 3 -     92717 ATT
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              50130 3 +     85213 ATT
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191794 3 +  23207421 ATT
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2259 3 -     18090 ATT
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26290 3 +     34529 ATT
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 213
s Bison_bison.KN261452.1                                    199332 3 -    288883 ATT
i Bison_bison.KN261452.1                                 C 0 I 217
s Bos_indicus.CM003047.1                                  20272537 3 +  48749331 ATt
i Bos_indicus.CM003047.1                                 C 0 I 217
s Bos_mutus.JH880303.1                                     1125093 3 -   1948126 ATt
i Bos_mutus.JH880303.1                                   C 0 I 217
s Bos_taurus.CM000203.6                                   18083175 3 +  45695690 ATt
i Bos_taurus.CM000203.6                                  C 0 I 217
s Bubalus_bubalis.KI419123.1                               2818839 3 +   4408762 att
i Bubalus_bubalis.KI419123.1                             C 0 I 220
s Camelus_bactrianus.KN276810.1                            9999127 3 -  17673402 ATT
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331591 3 -   7040546 ATT
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399867 3 -   1652518 ATT
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795970 3 -  60362399 GTT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182027 3 -    185531 GTT
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031414 3 -   9314153 GTT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955678 3 -  59632846 gtt
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496979 3 +  63665305 GTT
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18829486 3 +  46296322 ATT
i Capra_aegagrus.CM003241.1                              C 0 I 213
s Capra_hircus.CM004588.1                                 18060206 3 -  44709034 ATT
i Capra_hircus.CM004588.1                                C 0 I 213
s Carlito_syrichta.NW_007259797.1                           141250 3 -    496798 ATT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                3089 3 -     11696 ATT
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133845 3 +    179628 ATT
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89452 3 +    217609 ATT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18347848 3 -  23392119 ACT
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18360108 3 -  23407841 ACT
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98982 3 +    143979 ACT
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         5165 3 -      8605 ATT
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12228085 3 +  27778364 ATT
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2803 3 -      3715 ATT
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470787 3 +   4669795 ATT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         9336 3 -     19203 ATT
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3757 3 +      8260 ATT
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3985 3 +     27781 ATT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         4143 3 -     20310 ATT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           7127 3 +     29689 ATT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            1565 3 +      9989 ATT
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9811 3 -     27936 ATT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9837 3 -     11289 ATT
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38812209 3 +  39242232 ATT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217908 3 -  21565898 ATT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       35023 3 -     53127 ATT
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        2312 3 +      7159 ATT
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9830 3 -     27947 ATT
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9806 3 +     17596 ATT
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         40306 3 -     41420 ATT
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Cheirogaleus_major.k141_333249                             16921 3 -     52598 ATT
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12271 3 +     57038 ATC
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1251205 3 +   2543920 ATT
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18423769 3 -  18827391 GTT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       10212 3 -     50209 GTT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135417218 3 + 135778131 GTT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15374 3 +     19366 ATT
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170473 3 +    839153 ATT
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_172426               9855 3 -     10935 ACT
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          C 0 C 0
s Colobus_angolensis.KN981557.1                            1905744 3 +   2368649 ATT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199945414 3 + 200372422 ATT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              32285 3 +     84244 ATT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17546501 3 -  53390261 GCT
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10712 3 -     20389 ACT
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_807070               423 3 +      1402 ATT
i Crocidura_indochinensis.CroInd_scaffold_807070         I 184 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24417 3 -     87169 CTT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 3264 3 +      5455 ATT
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1615 3 +      3576 ATT
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12533093 3 -  12879189 ATT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811429 3 +  35494412 ATT
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8628121 3 +  20541912 att
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669935 3 +   1390856 ATT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2693 3 +    198055 ATT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34674 3 +     67921 ATT
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18895999 3 +  37912305 ATT
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  12217 3 +     14536 ATT
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31861 3 -     42551 ATT
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE759718.1                                   7619 3 +     11740 ACt
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310493 3 +    607251 ATt
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 229
s Elephantulus_edwardii.JH947257.1                         1089218 3 +  10337057 ATT
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16325975 3 -  41312741 GTT
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144272 3 -  14770903 aat
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279972 3 +   4378816 ATT
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527793 3 -  39960074 ATT
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29808 3 +    498745 ATT
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3325509 3 -   7059049 ATT
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21200400 3 -  21539334 GTT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11105 3 +    133382 ATT
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             25042 3 -     44125 ATT
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Eulemur_albifrons.k141_342033                               9601 3 -     14127 ATT
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                2299 3 -     16928 ATT
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              11332 3 -     25546 ATT
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             8517 3 +     26330 ATT
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                  9774 3 +     23973 ATT
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 8517 3 +     75513 ATT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  6469 3 +     97555 ATT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                             9395 3 +     26496 ATT
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_754848                                  18686 3 +     18826 ATT
i Eulemur_rufus.k141_754848                              N 0 C 0
s Eulemur_sanfordi.k141_1122526                               9580 3 +    111500 ATT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20233338 3 + 206538554 ATT
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20192168 3 + 205367284 ATT
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  5693 3 -     36744 ATT
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25657 3 +     26054 ATT
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30547 3 +     49224 ATT
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              11062 3 -     32273 ATT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186333210 3 + 186649187 ATT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   30271 3 +     78134 ATC
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           2666 3 -     19426 ATT
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              7810 3 -     15286 ATT
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                              9448 3 +     18253 ATT
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                          9551 3 -     41752 ATT
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                          9384 3 -     16460 ATT
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238334 2 +    327341 -AT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17690 3 +     36099 ATT
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 I 213
s Heterocephalus_glaber.JH602082.1                        20659769 3 +  22651954 ACT
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 455 3 +       961 ATT
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112242 3 +    128679 ATT
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108488 3 +   1711038 ACT
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39929 3 +     43066 ACT
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    429957 3 +    630532 ATT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40807 3 +     55795 ATG
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20237 3 -    143317 ATT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_307679                               12888 3 -     15490 ATT
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              54893 3 +     67168 ATT
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189538543 3 - 191637585 ATT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3331436 3 -  11177569 ATT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      81333 3 +    135385 ACT
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514789 3 -   7955117 ATT
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   18367 3 +     31101 ATT
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22646 3 +     23964 ATT
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271572 3 -   9596543 TTT
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    12681 3 -     42476 AAT
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15519910 3 -  30322482 ATT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3036308 3 +   3914936 GTT
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             267698 3 -    662738 ATT
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1432331 3 +   1826925 ATT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             889 3 +     11245 ATG
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999726 3 +   6120653 ATG
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214726 3 -  43346337 ATT
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951918 3 -  59628241 gtt
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               2152 3 +     40492 ATT
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59671407 3 +  60120075 ATT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7907 3 -     26193 ATT
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75704 3 -    114318 ATT
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  1419 3 -     23192 ATT
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10872 3 -     29190 ATT
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  19439 3 +     37952 ATT
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834527 3 + 187317192 ATT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25453090 3 -  25927173 ATT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  75288 3 +     89720 ATT
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 2286 3 +     20474 ATT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   2087 3 -     14993 ATT
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324959 3 -    668171 ATT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                  390 3 -     24072 ATT
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               21026 3 -     45290 ATT
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87728 3 +     94391 ATT
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23932575 3 -  24302211 ATT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346752 3 +    752769 ATT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15795 3 +    737560 ATT
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              47184 3 -    317179 ATT
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097639 3 -  40650429 ATT
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6993 3 -    207569 ATT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6688 3 +     13704 GTT
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3314 3 +     10310 ATT
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18283525 3 -  93316391 att
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    15848 3 -    145209 ATT
i Microgale_talazaci.MicTal_scaffold_6613                I 274 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13632 3 -     19307 ATT
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849307 3 +   8254450 ATT
i Miniopterus_natalensis.LDJU01000034.1                  T 199 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             33183 3 +     64694 ATT
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           4325 3 -     28506 ATT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62638 3 -     63350 GTT
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      4874 3 -     37649 ATT
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26819 3 -    437263 ATT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138036 3 -    366855 GTT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                    544 3 +     82753 ATT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 229
s Mungos_mungo.MunMun_flattened_line_23663                   31539 3 +     37127 AAT
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5331 3 +     14753 AAT
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2540 3 +     14296 ATT
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               297873 3 -  14710649 GTT
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                278503 3 -  10118263 aat
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1586058 3 -   6019432 aat
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902267 3 -   4330536 aat
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32827 3 +     33610 AAT
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186322 3 +    196477 AAT
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 1 C 0
s Nannospalax_galili.KL204047.1                            2025703 3 -   3037898 ATT
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               10325 3 +     21681 ATT
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865775 3 +   7148211 ATT
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756594 3 +    783361 AGT
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146180 3 -   9404916 GTT
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102574693 3 - 196305487 ATG
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2379 3 +      8486 ATG
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105745120 3 + 199412804 ATG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355963 3 +   3988456 att
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              500925 3 -   2017862 GTT
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         144865 3 +    630418 ATt
i Odocoileus_virginianus.KZ100018.1                      C 0 I 228
s Orcinus_orca.KB316932.1                                  2781690 3 -  10937097 ATT
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               7277 3 -     18566 ATT
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458933 3 -    559221 GTT
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17585221 3 +  44047080 ATt
i Ovis_aries.CM001607.2                                  C 0 I 657
s Ovis_canadensis.OviCan_scaffold_2572                      173642 3 -    191736 ATT
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 I 213
s Pan_paniscus.KQ411613.1                                    39179 3 +     80009 ATT
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189138072 3 + 189151597 ATT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  147318 3 +    230217 ATT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                260027 3 +  18783137 ATT
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4717174 3 -   8748460 ATT
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1264575 3 -   2937107 ATt
i Pantholops_hodgsonii.KE114653.1                        C 0 I 213
s Papio_anubis.CM001495.2                                183438360 3 + 183742232 ATT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             2053 3 +     20448 ATT
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20558858 3 +  20919399 ATT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                    796 3 +     41871 ATT
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     4082 3 +     27711 ATT
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  4167 3 +      9205 ATT
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9055 3 -     78924 ATT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            4864 3 +     13100 ATG
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             3232 3 +     25941 ATG
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25477 3 +     32600 ATT
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     26224 3 -     29689 ATT
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8737 3 +     63832 ATT
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38837 3 +     62158 ATT
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33559 3 +     89929 ATT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34975 3 +     51399 ATT
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14291211 3 -  14605196 ATT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              652 3 +     22620 AAT
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34443 3 +     35617 ATT
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189126260 3 + 189387572 ATT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9565866 3 +   9816681 ATT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68486 3 -     81375 ATT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                               307 3 +     19060 ATT
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 10204 3 -     22811 ATT
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2592563 3 -   4620579 ATT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986576 3 +   2598838 ATT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          24865 3 +     38485 ATT
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             1026 3 +      4256 ATT
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22384 3 +     35766 ATT
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            567 3 -     24134 ATT
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24379 3 -     67325 ATT
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            624 3 -      6182 ATT
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11429 3 -     21811 att
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36884 3 +     42204 GTT
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973887 3 +  28871421 att
i Pteropus_alecto.KB030862.1                             I 1 C 0
s Pteropus_vampyrus.KN534172.1                                1825 3 -      8028 att
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20270482 3 -  38429054 ATT
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             10318 3 -     91421 ATT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7604446 3 +   7812017 ATT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10287 3 -     72585 ATT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5113 3 +     55207 ATT
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 228
s Rhinolophus_sinicus.LVEH01000134.1                        367033 3 -   3329780 att
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             2002 3 -     11128 ATT
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91231357 3 - 195417433 ATT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7667006 3 +   7961872 ATT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84877 3 -     96226 ATT
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3764 3 +      4321 ATT
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 I 209
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151560 3 -    313613 GCT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          14830 3 -     19888 ATT
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      22032 3 +     39453 ATT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2558 3 +     27826 ATT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             2079 3 -     19483 ATT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      2141 3 +      7198 ATT
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         10401 3 +     15514 ATT
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187877 3 -    191337 ATG
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13647421 3 -  18376816 ACT
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1948427 3 -   3870691 GTT
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27422 3 +     97271 GCT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14413 3 -    196729 AAT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   62882669 3 -  69701581 ATT
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1088587 3 -   1523678 ATT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 7028 3 +     41958 GTT
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69684 3 +    116680 AGT
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 1 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115414 3 -    156842 ATT
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383869 3 +    539355 ATT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10864 3 +     70052 ATT
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               15169 3 +     25099 ATT
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186423404 3 + 186847797 ATT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103654 3 +    114563 ATT
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     79177 3 +    610378 ATT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          6132 3 -     20410 ATT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    10328 3 +     15221 ATT
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        6233 3 +     19930 ATT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2663 3 -     19997 ATT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42782 3 -     60166 ATT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        10255 3 -     27529 ATT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     10195 3 -     18194 ATT
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3930 3 -     21137 ATT
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2633 3 -     10723 ATT
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1785 3 +      9834 ATT
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        20103 3 +     32220 ATT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5934200 3 +   6242583 ATT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        3447 3 +     20839 ATT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                    880 3 -      1748 ATT
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 I 127
s Tupaia_chinensis.KB320699.1                              2150617 3 +   4065304 GTT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     3915 3 -     10553 GTT
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737937 3 +  33153633 ATT
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_97021                    2130 2 -      4736 -TT
i Uropsilus_gracilis.UroGra_scaffold_97021               I 18 C 0
s Ursus_maritimus.KK499267.1                               4847127 3 -   5085361 GTT
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   7251 3 +     50397 ATT
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              7299 3 +     24756 ATT
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368618 3 -   5488506 ATT
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7594 3 -     43706 GTT
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19928 3 -     24430 ATT
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          2047 3 +      2932 GTT
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      10199 3 +     63895 ATT
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11629 3 +     12536 ATT
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   2058 0 +      8208 C
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Lepilemur_septentrionalis.k141_185316                      22934 4 +     54090 I
e Lepilemur_ruficaudatus.k141_582783                           754 56 -      1589 I
e Lepilemur_dorsalis.k141_577674                             24879 4 +     45836 I
e Lepilemur_ankaranensis.k141_596936                          6932 4 -     23766 I
e Kogia_breviceps.KogBre_flattened_line_192630                1875 2 -      3359 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galagoides_demidoff.k141_31856                              3217 0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Dasypus_novemcinctus.JH564415.1                            61269 0 +   2246927 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            4997 0 -      6351 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1830 1 +     62944 G
s Acinonyx_jubatus.LLWD01001279.1                           823471 1 -   1699592 G
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507192 1 -  29979442 G
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             75413 1 -    347723 g
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 378
s Allactaga_bullata.AllBul_scaffold_9566                     65181 1 -     89534 G
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9830 1 -     52922 G
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9763 1 -     28001 G
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                           209 1 -     18505 G
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           1058 1 -     12518 G
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183318 1 +    412891 G
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14631 1 +     17124 G
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2675 1 +     43469 G
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  49508 1 -     92717 G
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              50133 1 +     85213 G
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191797 1 +  23207421 G
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2262 1 -     18090 G
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Camelus_bactrianus.KN276810.1                            9999130 1 -  17673402 G
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331594 1 -   7040546 G
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399870 1 -   1652518 G
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795973 1 -  60362399 G
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182030 1 -    185531 G
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031417 1 -   9314153 G
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955681 1 -  59632846 g
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496982 1 +  63665305 G
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           141253 1 -    496798 A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                3092 1 -     11696 G
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133848 1 +    179628 G
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89455 1 +    217609 G
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18347851 1 -  23392119 A
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18360111 1 -  23407841 A
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98985 1 +    143979 A
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         5168 1 -      8605 A
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12228088 1 +  27778364 G
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2806 1 -      3715 G
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470790 1 +   4669795 G
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         9339 1 -     19203 G
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3760 1 +      8260 G
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3988 1 +     27781 G
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         4146 1 -     20310 T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           7130 1 +     29689 T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            1568 1 +      9989 G
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9814 1 -     27936 G
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9840 1 -     11289 G
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38812212 1 +  39242232 T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217911 1 -  21565898 G
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       35026 1 -     53127 G
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        2315 1 +      7159 T
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9833 1 -     27947 G
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9809 1 +     17596 G
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         40309 1 -     41420 G
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Cheirogaleus_major.k141_333249                             16924 1 -     52598 G
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12274 1 +     57038 G
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1251208 1 +   2543920 G
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18423772 1 -  18827391 G
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       10215 1 -     50209 G
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135417221 1 + 135778131 G
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15377 1 +     19366 G
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170476 1 +    839153 G
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_172426               9858 1 -     10935 G
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          C 0 C 0
s Colobus_angolensis.KN981557.1                            1905747 1 +   2368649 G
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199945417 1 + 200372422 G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              32288 1 +     84244 G
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17546504 1 -  53390261 G
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10715 1 -     20389 G
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_603213              1432 1 +      1923 G
i Crocidura_indochinensis.CroInd_scaffold_603213         I 296 I 38
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24420 1 -     87169 G
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 3267 1 +      5455 A
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1618 1 +      3576 A
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12533096 1 -  12879189 G
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811432 1 +  35494412 G
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8628124 1 +  20541912 g
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669938 1 +   1390856 G
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2696 1 +    198055 G
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34677 1 +     67921 G
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18896002 1 +  37912305 G
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  12220 1 +     14536 G
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31864 1 -     42551 A
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE759718.1                                   7622 1 +     11740 g
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1089221 1 +  10337057 T
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16325978 1 -  41312741 G
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144275 1 -  14770903 g
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279975 1 +   4378816 G
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527796 1 -  39960074 G
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29811 1 +    498745 G
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3325512 1 -   7059049 T
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21200403 1 -  21539334 G
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11108 1 +    133382 G
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             25045 1 -     44125 G
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Eulemur_albifrons.k141_342033                               9604 1 -     14127 G
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                2302 1 -     16928 G
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              11335 1 -     25546 G
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             8520 1 +     26330 G
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                  9777 1 +     23973 G
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 8520 1 +     75513 G
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  6472 1 +     97555 G
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                             9398 1 +     26496 G
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_754848                                  18689 1 +     18826 G
i Eulemur_rufus.k141_754848                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                               9583 1 +    111500 G
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20233341 1 + 206538554 G
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20192171 1 + 205367284 G
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  5696 1 -     36744 G
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25660 1 +     26054 A
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30550 1 +     49224 C
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              11065 1 -     32273 G
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186333213 1 + 186649187 G
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   30274 1 +     78134 A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           2669 1 -     19426 G
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              7813 1 -     15286 G
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                              9451 1 +     18253 G
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                          9554 1 -     41752 G
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                          9387 1 -     16460 G
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238336 1 +    327341 G
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20659772 1 +  22651954 G
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 458 1 +       961 G
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112245 1 +    128679 G
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hoolock_leuconedys.ctg274                                    429960 1 +    630532 G
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40810 1 +     55795 G
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20240 1 -    143317 A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_307679                               12891 1 -     15490 G
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              54896 1 +     67168 G
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189538546 1 - 191637585 G
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3331439 1 -  11177569 G
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      81336 1 +    135385 G
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514792 1 -   7955117 G
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   18370 1 +     31101 G
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22649 1 +     23964 G
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271575 1 -   9596543 A
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    12684 1 -     42476 G
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 14
s Lemur_catta.scaffold_24                                 15519913 1 -  30322482 G
i Lemur_catta.scaffold_24                                C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3036311 1 +   3914936 G
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             267701 1 -    662738 G
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1432334 1 +   1826925 G
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             892 1 +     11245 G
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999729 1 +   6120653 G
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214729 1 -  43346337 G
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951921 1 -  59628241 g
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               2155 1 +     40492 G
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59671410 1 +  60120075 G
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7910 1 -     26193 G
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75707 1 -    114318 G
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  1422 1 -     23192 G
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10875 1 -     29190 G
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  19442 1 +     37952 G
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834530 1 + 187317192 G
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25453093 1 -  25927173 G
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  75291 1 +     89720 G
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 2289 1 +     20474 G
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   2090 1 -     14993 G
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324962 1 -    668171 G
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                  393 1 -     24072 G
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               21029 1 -     45290 G
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87731 1 +     94391 G
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23932578 1 -  24302211 G
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346755 1 +    752769 G
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15798 1 +    737560 G
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              47187 1 -    317179 G
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097642 1 -  40650429 G
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6996 1 -    207569 G
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6691 1 +     13704 G
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3317 1 +     10310 G
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18283528 1 -  93316391 g
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    15851 1 -    145209 A
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13635 1 -     19307 G
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849310 1 +   8254450 G
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             33186 1 +     64694 G
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           4328 1 -     28506 G
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62641 1 -     63350 G
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      4877 1 -     37649 G
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26822 1 -    437263 G
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138039 1 -    366855 G
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31542 1 +     37127 G
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5334 1 +     14753 G
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2543 1 +     14296 G
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               297876 1 -  14710649 G
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                278506 1 -  10118263 g
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1586061 1 -   6019432 g
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902270 1 -   4330536 g
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32830 1 +     33610 G
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186325 1 +    196477 G
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nasalis_larvatus.k141_413338                               10328 1 +     21681 G
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865778 1 +   7148211 G
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756597 1 +    783361 G
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146183 1 -   9404916 G
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102574696 1 - 196305487 G
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2382 1 +      8486 G
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105745123 1 + 199412804 G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355966 1 +   3988456 g
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              500928 1 -   2017862 G
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Orcinus_orca.KB316932.1                                  2781693 1 -  10937097 G
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               7280 1 -     18566 A
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458936 1 -    559221 G
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Pan_paniscus.KQ411613.1                                    39182 1 +     80009 G
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189138075 1 + 189151597 G
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  147321 1 +    230217 G
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                260030 1 +  18783137 G
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4717177 1 -   8748460 G
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183438363 1 + 183742232 G
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             2056 1 +     20448 G
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20558861 1 +  20919399 G
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                    799 1 +     41871 G
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     4085 1 +     27711 G
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  4170 1 +      9205 G
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9058 1 -     78924 G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            4867 1 +     13100 G
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             3235 1 +     25941 G
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25480 1 +     32600 A
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     26227 1 -     29689 G
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8740 1 +     63832 G
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38840 1 +     62158 G
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33562 1 +     89929 G
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34978 1 +     51399 G
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14291214 1 -  14605196 G
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              655 1 +     22620 G
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34446 1 +     35617 G
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189126263 1 + 189387572 G
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9565869 1 +   9816681 G
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68489 1 -     81375 G
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                               310 1 +     19060 G
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 10207 1 -     22811 G
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2592566 1 -   4620579 G
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986579 1 +   2598838 G
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          24868 1 +     38485 G
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             1029 1 +      4256 G
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22387 1 +     35766 G
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            570 1 -     24134 G
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24382 1 -     67325 G
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            627 1 -      6182 G
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11432 1 -     21811 g
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36887 1 +     42204 G
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973890 1 +  28871421 g
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1828 1 -      8028 g
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20270485 1 -  38429054 G
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             10321 1 -     91421 G
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7604449 1 +   7812017 G
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10290 1 -     72585 G
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        367036 1 -   3329780 g
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             2005 1 -     11128 G
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91231360 1 - 195417433 G
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7667009 1 +   7961872 G
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84880 1 -     96226 G
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151563 1 -    313613 G
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          14833 1 -     19888 G
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      22035 1 +     39453 G
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2561 1 +     27826 G
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             2082 1 -     19483 G
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      2144 1 +      7198 G
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         10404 1 +     15514 G
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187880 1 -    191337 G
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13647424 1 -  18376816 G
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1948430 1 -   3870691 G
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27425 1 +     97271 G
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14416 1 -    196729 G
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   62882672 1 -  69701581 G
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1088590 1 -   1523678 G
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 7031 1 +     41958 G
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69687 1 +    116680 G
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115417 1 -    156842 G
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383872 1 +    539355 G
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10867 1 +     70052 A
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               15172 1 +     25099 A
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186423407 1 + 186847797 G
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103657 1 +    114563 G
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     79180 1 +    610378 G
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          6135 1 -     20410 G
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    10331 1 +     15221 G
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        6236 1 +     19930 G
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2666 1 -     19997 G
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42785 1 -     60166 G
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        10258 1 -     27529 G
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     10198 1 -     18194 G
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3933 1 -     21137 G
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2636 1 -     10723 G
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1788 1 +      9834 G
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        20106 1 +     32220 G
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5934203 1 +   6242583 G
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        3450 1 +     20839 G
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                   1010 1 -      1748 C
i Tragulus_javanicus.TraJav_scaffold_140459              I 127 C 0
s Tupaia_chinensis.KB320699.1                              2150620 1 +   4065304 A
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     3918 1 -     10553 A
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737940 1 +  33153633 G
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_97021                    2132 1 -      4736 G
i Uropsilus_gracilis.UroGra_scaffold_97021               C 0 I 7
s Ursus_maritimus.KK499267.1                               4847130 1 -   5085361 G
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   7254 1 +     50397 G
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              7302 1 +     24756 G
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368621 1 -   5488506 G
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7597 1 -     43706 G
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19931 1 -     24430 G
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          2050 1 +      2932 G
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      10202 1 +     63895 G
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11632 1 +     12536 G
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   2058 0 +      8208 C
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Saiga_tatarica.SaiTat_scaffold_373180                       3767 209 +      4321 I
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5116 228 +     55207 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1264578 213 -   2937107 I
e Ovis_canadensis.OviCan_scaffold_2572                      173645 213 -    191736 I
e Ovis_aries.CM001607.2                                   17585224 657 +  44047080 I
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          76373 234 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         144868 228 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.KL204047.1                            2025706 0 -   3037898 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Moschus_moschiferus.MosMos_scaffold_13123                    547 229 +     82753 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Lepilemur_septentrionalis.k141_185316                      22934 4 +     54090 I
e Lepilemur_ruficaudatus.k141_582783                           754 56 -      1589 I
e Lepilemur_dorsalis.k141_577674                             24879 4 +     45836 I
e Lepilemur_ankaranensis.k141_596936                          6932 4 -     23766 I
e Kogia_breviceps.KogBre_flattened_line_192630                1875 2 -      3359 I
e Hipposideros_galeritus.HipGal_scaffold_29171               39932 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       108491 0 +   1711038 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 17693 213 +     36099 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     608457 234 -    660261 I
e Galagoides_demidoff.k141_31856                              3217 0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       310496 229 +    607251 I
e Dasypus_novemcinctus.JH564415.1                            61269 0 +   2246927 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            4997 0 -      6351 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18060209 213 -  44709034 I
e Capra_aegagrus.CM003241.1                               18829489 213 +  46296322 I
e Bubalus_bubalis.KI419123.1                               2818842 220 +   4408762 I
e Bos_taurus.CM000203.6                                   18083178 217 +  45695690 I
e Bos_mutus.JH880303.1                                     1125096 217 -   1948126 I
e Bos_indicus.CM003047.1                                  20272540 217 +  48749331 I
e Bison_bison.KN261452.1                                    199335 217 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    26293 213 +     34529 I
e Aplodontia_rufa.AprRuf_scaffold_68852                       7473 0 +     20879 C
e Antilocapra_americana.AntAmePen_scaffold_12469             97825 229 -    100397 I
e Ammotragus_lervia.NIVO01071767.1                          675371 213 -   2318259 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1831 14 +     62944 TCTC-TCTTTT-CAAT
s Acinonyx_jubatus.LLWD01001279.1                           823472 14 -   1699592 TCTC-TTTGTT-CAAT
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507193 14 -  29979442 TCTC-TTTTTT-CAGT
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             75792 14 -    347723 TCTC-TTTTTT-CAAT
i Ailurus_fulgens.LNAC01001112.1                         I 378 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     65182 13 -     89534 ACTC-TCTT-T-CATT
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9831 14 -     52922 TCTC-TCTTTT-CAAT
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9764 12 -     28001 TCTC-T--TTT-CAGT
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                           210 12 -     18505 TCTC-T--TTT-CAGT
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           1059 12 -     12518 TCTC-T--TTT-CAGT
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675584  3 -   2318259 -------------AGT
i Ammotragus_lervia.NIVO01071767.1                       I 213 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183319 14 +    412891 TCTT-TCTTTT-CAGT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             98054 14 -    100397 TCTC-TCTTTT-CAGT
i Antilocapra_americana.AntAmePen_scaffold_12469         I 229 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7473 12 +     20879 --TC-TCTTTT-CAGT
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14632 14 +     17124 CCTC-TTTATT-CAAT
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2676 14 +     43469 TCTT-TCTTTT-CAAT
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  49509 14 -     92717 CCTC-TTTTTT-CAAT
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              50134 14 +     85213 CCTC-TTTTTT-CAAT
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191798 14 +  23207421 TCTC-TCTTTT-CAGT
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2263 14 -     18090 TCTC-TCTTTT-CAGT
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26506  3 +     34529 -------------AGT
i Beatragus_hunteri.BeaHun_scaffold_50177                I 213 C 0
s Bison_bison.KN261452.1                                    199552 14 -    288883 TCTC-TCTTTT-CAGT
i Bison_bison.KN261452.1                                 I 217 C 0
s Bos_indicus.CM003047.1                                  20272757 14 +  48749331 TCTC-TCTTTT-CAGT
i Bos_indicus.CM003047.1                                 I 217 C 0
s Bos_mutus.JH880303.1                                     1125313 14 -   1948126 TCTC-TCTTTT-CAGT
i Bos_mutus.JH880303.1                                   I 217 C 0
s Bos_taurus.CM000203.6                                   18083395 14 +  45695690 TCTC-TCTTTT-CAGT
i Bos_taurus.CM000203.6                                  I 217 C 0
s Bubalus_bubalis.KI419123.1                               2819062 14 +   4408762 TCTC-TCTTTT-CAGT
i Bubalus_bubalis.KI419123.1                             I 220 C 0
s Camelus_bactrianus.KN276810.1                            9999131 14 -  17673402 CCTC-TCTTTC-CAAT
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331595 14 -   7040546 CCTC-TCTTTC-CAAT
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399871 14 -   1652518 CCTC-TCTTTC-CAAT
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795974 15 -  60362399 TCTC-TTTTTTTCAAT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182031 15 -    185531 TCTC-TTTTTTTCAAT
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031418 14 -   9314153 TCTC-TTTTTT-CAAT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955682 15 -  59632846 tctc-tttttttcaat
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496983 14 +  63665305 TCTC-TTTTTT-CAAT
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18829702  3 +  46296322 -------------AGT
i Capra_aegagrus.CM003241.1                              I 213 C 0
s Capra_hircus.CM004588.1                                 18060422  3 -  44709034 -------------AGT
i Capra_hircus.CM004588.1                                I 213 C 0
s Carlito_syrichta.NW_007259797.1                           141254 14 -    496798 TTTC-CCTTTT-CAAT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                3093 14 -     11696 TCTT-TCCTTT-CAAT
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133849 14 +    179628 TCTC-TCTTTA-TAAT
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89456 14 +    217609 TCTC-TCTTTT-CAGT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18347852 14 -  23392119 TGTC-TCTTTT-CAAT
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18360112 14 -  23407841 TGTC-TCTTTT-CAAT
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        98986 14 +    143979 TGTC-TCTTTT-CAAT
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         5169 14 -      8605 TTTC-TCTTTT-CTAT
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12228089 14 +  27778364 TCTC-TCTATT-CAAT
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2807 14 -      3715 TCTC-TCTATT-CAAT
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470791 14 +   4669795 TCTC-TCTTTT-CAAT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         9340 14 -     19203 TCTC-TCTTTT-CAAT
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3761 14 +      8260 TCTC-TCTTTT-CAAT
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           3989 14 +     27781 TCTC-TCTTTT-CAAT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         4147 14 -     20310 TCTC-TCTTTT-CAAT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           7131 14 +     29689 TCTC-TCTTTT-CAAT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            1569 14 +      9989 TCTC-TCTTTT-CAAT
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9815 14 -     27936 TCTC-TCTTTT-CAAT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9841 14 -     11289 TCTC-TCTCTT-CAGT
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38812213 14 +  39242232 TCTC-TCTTTT-CAAT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217912 14 -  21565898 TCTC-TCTTTT-CAAT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       35027 14 -     53127 TCTC-TCTTTT-CAAT
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        2316 14 +      7159 TCTC-TCTTTT-CAAT
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9834 14 -     27947 TCTC-TCTTTT-CAAT
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9810 14 +     17596 TCTC-TCTTTT-CAAT
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         40310 14 -     41420 TCTC-TCTTTT-CAAT
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            4997 14 -      6351 TCTC-TCTTTT-CAGT
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16925 14 -     52598 CCTC-TTTTTT-CAAT
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12275 14 +     57038 CCTC-TTTTTT-CAAT
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1251209  5 +   2543920 TGCC-T----------
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18423773 14 -  18827391 TCTC-TCTTTT-CAAT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       10216 12 -     50209 TCTC-T--TTT-CAAT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135417222 14 + 135778131 TCTC-TCTTTT-CAAT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15378 14 +     19366 TCTC-TCTTTT-CAGT
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170477 14 +    839153 TCTC-TCTTTT-CAGT
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_172426               9859 14 -     10935 TCAC-TCTTTT-CTTT
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          C 0 C 0
s Colobus_angolensis.KN981557.1                            1905748 14 +   2368649 TCTC-TCTCTT-CAAT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199945418 14 + 200372422 TCTC-TCTCTT-CAAT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              32289 14 +     84244 TCTC-TCTCTT-CAAT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17546505 12 -  53390261 TCC---TTTTT-CAAT
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10716 14 -     20389 TCTT-CCTTTT-CAAT
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_807070               427 14 +      1402 CCCC-ACTGTT-AAAT
i Crocidura_indochinensis.CroInd_scaffold_807070         I 1 I 125
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24421 14 -     87169 TCTC-TTTGTT-CAAT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 3268 14 +      5455 TGTT-TCTTTT-CAAT
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1619 14 +      3576 TGTT-TCTTTT-CAAT
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            61269 12 +   2246927 TCT---CTTTT-CAAT
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12533097 14 -  12879189 TCTC-TTTTTT-CAAT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811433 14 +  35494412 TCTC-TCTTTA-AAAT
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8628125 14 +  20541912 tctt-tctttt-caat
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669939 14 +   1390856 TCTC-TCTGTT-CAAT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2697 14 +    198055 TCTC-TCTATT-CAAT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34678 14 +     67921 TGCT-TCTTTT-CAAT
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18896003 14 +  37912305 TCCC-TCTttt-catt
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  12221 14 +     14536 TCCC-TCTTTT-CATT
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31865 14 -     42551 TGTT-TCTTTT-CAAT
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE759718.1                                   7623 14 +     11740 tatt-tctttt-caat
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310725 14 +    607251 TCTC-TCTTTC-CAGT
i Elaphurus_davidianus.JRFZ01104969.1                    I 229 C 0
s Elephantulus_edwardii.JH947257.1                         1089222 14 +  10337057 CCCA-TTTTAC-CATT
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16325979 14 -  41312741 TCTC-TTTTTT-CAAT
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144276 13 -  14770903 tttt-tatttt-caa-
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279976 14 +   4378816 TCTT-TCTTTG-CAAT
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527797 14 -  39960074 TCTT-TCTTTG-CAAT
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29812 14 +    498745 TCTT-TCTTTG-CAAT
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3325513 14 -   7059049 TTAT-GGCATT-CAAT
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21200404 14 -  21539334 TCTC-TCTTTT-CAAT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11109 14 +    133382 TCTC-TCTTTT-CAAT
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             25046 14 -     44125 TCTC-TCTTTT-CAGT
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Eulemur_albifrons.k141_342033                               9605 14 -     14127 CCTC-TTTTTT-TAAT
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                2303 14 -     16928 CCTC-TTTTTT-TAAT
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              11336 14 -     25546 CCTC-TTTTTT-CAAT
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             8521 14 +     26330 CCTC-TTTTTT-CAAT
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                  9778 14 +     23973 CCTC-TTTTTT-CAAT
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 8521 14 +     75513 CCTC-TTTTTT-CAAT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  6473 14 +     97555 CCTC-TTTTTT-CAAT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                             9399 14 +     26496 CCTC-TTTTTT-CAAT
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_754848                                  18690 14 +     18826 CCTC-TTTTTT-TAAT
i Eulemur_rufus.k141_754848                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                               9584 14 +    111500 CCTC-TTTTTT-CAAT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20233342 14 + 206538554 TCTC-TTTGTT-CAAT
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20192172 14 + 205367284 TCTC-TTTGTT-CAAT
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  5697 14 -     36744 TCTC-TTTGTT-CAAT
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25661 14 +     26054 TCTC-TCTTTT-CAAT
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     608691 14 -    660261 TCTC-TCTTTT-CAGT
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 234 C 0
s Glis_glis.GliGli_scaffold_19807                            30551 14 +     49224 TCTC-TCTTTT-TGAT
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              11066 14 -     32273 TCTC-TCTTTT-CAAT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186333214 14 + 186649187 TCTC-TCTTTT-CAAT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   30275 14 +     78134 TCTC-TCATTT-TGAT
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           2670 14 -     19426 CCTC-TTTTTT-CAAT
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              7814 14 -     15286 CCTC-TTTTTT-CAAT
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                              9452 14 +     18253 CCTC-TTTTTT-CAAT
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                          9555 14 -     41752 CCTC-TTTTTT-CAAT
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                          9388 14 -     16460 CCTC-TTTTTT-CAAT
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238337 14 +    327341 TCTC-TTTGTT-CAAT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17906  3 +     36099 -------------AGT
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 213 C 0
s Heterocephalus_glaber.JH602082.1                        20659773 14 +  22651954 TGTC-TCTTTT-CAAT
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 459 12 +       961 T--C-CATTTT-CACT
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112246 14 +    128679 TCTC-TCTTTT-CAAT
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108491 13 +   1711038 -CTT-TCTTTT-CAAT
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39932 13 +     43066 -CTT-TCTTTT-CAAT
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    429961 14 +    630532 TCTC-TCTTTT-CAAT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40811 14 +     55795 CCTC-TTTGTT-CATT
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20241 14 -    143317 TGTT-TCTTTT-CAAT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_307679                               12892 14 -     15490 TCTT-TCTTTT-CAAT
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              54897 14 +     67168 TCTT-TCTTTT-CAAT
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189538547 14 - 191637585 TCTT-TCCTTT-CAAT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3331440 14 -  11177569 TCTT-TCTTTT-CAAT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      81337 14 +    135385 TGTC-TCTTTT-CAGT
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514793 14 -   7955117 TTTC-ACTTTT-CACT
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   18371 14 +     31101 CCTC-TTTTTT-CAAT
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22650 14 +     23964 TCTC-TCTTTT-CAAT
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271576 13 -   9596543 CTTC-TCTT-T-CAAT
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_50988                    12138 14 +     29960 TTTT-CATCTT-CAAC
i Lasiurus_borealis.LasBor_scaffold_50988                I 129 I 170
s Lemur_catta.scaffold_24                                 15519914 14 -  30322482 CCTC-TTTTTT-CAAT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3036312 14 +   3914936 TCTC-TTTTTT-CAAT
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             267702 14 -    662738 TCTC-TCTTTT-CAAT
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1432335 14 +   1826925 TCTC-TCTTTT-CAAT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             893 14 +     11245 CCTC-TTTATT-CAAT
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999730 14 +   6120653 CCTC-TTTATT-CAAT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214730 14 -  43346337 TCTC-TGTTTT-CACT
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951922 15 -  59628241 tctcttttttt-caat
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               2156 14 +     40492 TCTC-TCTTTT-CAAT
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59671411 14 +  60120075 TCTC-TCTTTT-CAAT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7911 14 -     26193 TCTC-TCTTTT-CAAT
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75708 14 -    114318 TCTC-TCTTTT-CAAT
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  1423 14 -     23192 TCTC-TCTTTT-CAAT
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10876 14 -     29190 TCTC-TCTTTT-CAAT
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  19443 14 +     37952 TCTC-TCTTTT-CAAT
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834531 14 + 187317192 TCTC-TCTTTT-CAAT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25453094 14 -  25927173 TCTC-TCTTTT-CAAT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  75292 14 +     89720 TCTC-TCTTTT-CAAT
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 2290 14 +     20474 TCTC-TCTTTT-CAAT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   2091 14 -     14993 TCTC-TCTTTT-CAAT
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324963 14 -    668171 TCTC-TCTTTT-CAAT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                  394 14 -     24072 TCTC-TCTTTT-CAAT
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               21030 14 -     45290 TCTC-TCTTTT-CAAT
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87732 14 +     94391 TATT-TCTTTT-CAAT
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23932579 14 -  24302211 TCTC-TCTTTT-CAGT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346756 14 +    752769 TCTC-TCTTTT-CAGT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15799 14 +    737560 TCTC-TCTTTT-CAAT
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              47188 14 -    317179 TCTC-TCTTTT-CAAT
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097643 14 -  40650429 TTAC-ACTTTT-CAAT
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         6997 14 -    207569 TCTT-TCTTTT-CAAT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6692 14 +     13704 TCTC-TTTTTT-CAAT
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3318 14 +     10310 TCTC-TCTTTT-CAAT
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18283529 14 -  93316391 cctc-ttcttt-tttt
i Microcebus_murinus.CM007674.1                          C 0 I 3781
s Microgale_talazaci.MicTal_scaffold_6613                    15852 13 -    145209 TAT--TCTTCT-CATT
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13636 14 -     19307 TCTT-TCTTTT-CAAT
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849311 14 +   8254450 TCTT-TCTTTT-CAAT
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 199
s Miniopterus_schreibersii.MinSch_scaffold_18080             33187 14 +     64694 TCTT-TCTTTT-CAAT
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           4329 14 -     28506 TCTC-TCTTTT-CAAT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62642 14 -     63350 TCTC-TTTTTT-CAAT
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      4878 14 -     37649 CCTC-TTCTTT-TAAT
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26823 14 -    437263 TCTC-TCTTTA-AAAT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138040 14 -    366855 TCTT-TCTTTT-CCAT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                    776 14 +     82753 TCTC-TCTTTT-CAGT
i Moschus_moschiferus.MosMos_scaffold_13123              I 229 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31543 14 +     37127 TCTC-TTTGTT-CAAT
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5335 14 +     14753 TTTT-TATTTT-CAAT
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2544 14 +     14296 TTTC-TCTTTT-TGAT
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               297877 14 -  14710649 TCTC-tttttt-caat
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                278507 14 -  10118263 tttt-tatttt-caat
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1586062 14 -   6019432 tttt-tatttt-caat
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902271 14 -   4330536 tttt-tatttt-caat
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32831 14 +     33610 TTTT-TATTTT-CAAT
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186326 14 +    196477 TCTC-TCTTTT-CAGG
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025706 12 -   3037898 -ACC-TGTT-T-CAGT
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               10329 14 +     21681 TCTC-TCTTTT-CAAT
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865779 14 +   7148211 TCTC-tcttta-aaat
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756598 14 +    783361 TCTT-TCTTTT-CAAT
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146184 14 -   9404916 TCTC-TTTTTT-CAAT
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102574697 14 - 196305487 CCTC-TTTATT-CAAT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2383 14 +      8486 CCTC-TTTATT-CAAT
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105745124 14 + 199412804 CCTC-TTTATT-CAAT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355967 14 +   3988456 tatc-tatttt-catt
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              500929 14 -   2017862 TCtc-tttttt-caat
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         145096 14 +    630418 TCTC-TCTTTT-CAGT
i Odocoileus_virginianus.KZ100018.1                      I 228 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          76607 14 -    150152 TCTC-TCTTTT-CAGT
i Okapia_johnstoni.LVCL01S0005463.1                      I 234 C 0
s Orcinus_orca.KB316932.1                                  2781694 14 -  10937097 TCTC-tcttta-aaat
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               7281 14 -     18566 TTTC-TCTTTT-CATT
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458937 14 -    559221 TCTC-TTTTTT-CAAT
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17585881  3 +  44047080 -------------AGT
i Ovis_aries.CM001607.2                                  I 657 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173858  3 -    191736 -------------AGT
i Ovis_canadensis.OviCan_scaffold_2572                   I 213 C 0
s Pan_paniscus.KQ411613.1                                    39183 14 +     80009 TCTC-TCTTTT-CAGT
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189138076 14 + 189151597 TCTC-TCTTTT-CAAT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  147322 14 +    230217 TCTC-TTTGTT-CAAT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                260031 14 +  18783137 TCTC-TTTGTT-CAAT
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4717178 14 -   8748460 TCTC-TTTGTT-CAAT
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1264791  3 -   2937107 -------------AGT
i Pantholops_hodgsonii.KE114653.1                        I 213 C 0
s Papio_anubis.CM001495.2                                183438364 14 + 183742232 TCTC-TCTTTT-CAAT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             2057 14 +     20448 TCTC-TCTTTT-CAAT
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20558862 14 +  20919399 TCTC-TCTTTT-CAAT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                    800 14 +     41871 TCTC-TCTTTT-CAAT
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     4086 14 +     27711 TCTC-TCTTTT-CAAT
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  4171 14 +      9205 TCTC-TCTTTT-CAAT
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9059 14 -     78924 TCTC-TTTGTT-CAGA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            4868 14 +     13100 CCTC-TTTATT-CAAT
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             3236 14 +     25941 CCTC-TTTATT-CAAT
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25481 14 +     32600 TCTC-TCTTTT-CAAC
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     26228 14 -     29689 TCTC-AATTTT-CAAC
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8741 14 +     63832 TCTC-TCTTTA-AAAT
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38841 14 +     62158 TCTC-TCTCTT-CAAT
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33563 14 +     89929 TCTC-TCTCTT-CAAT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34979 14 +     51399 TCTC-TCTCTT-CAAT
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14291215 14 -  14605196 TCTC-TCTCTT-CAAT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              656 13 +     22620 TTTT-TACTTT-CAA-
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34447 14 +     35617 TCTC-TCTTTT-CAAT
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189126264 14 + 189387572 TCTC-TCTTTT-CAAT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9565870 14 +   9816681 TCTC-TCTTTT-CAAC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68490 14 -     81375 TCTC-TCTTTT-CAAT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                               311 14 +     19060 TCTC-TCTTTT-CAAT
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 10208 12 -     22811 T--C-CATTTT-CACT
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2592567 14 -   4620579 CCTC-tttttt-caat
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986580 14 +   2598838 CCTC-TTTTTT-CAAT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          24869 14 +     38485 CCTC-TTTTTT-CAAT
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             1030 14 +      4256 CCTC-TTTTTT-CAAT
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22388 14 +     35766 CCTC-TTTTTT-CAAT
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            571 14 -     24134 CCTC-TTTTTT-CAAT
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24383 14 -     67325 CCTC-TTTTTT-CAAT
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            628 14 -      6182 CCTC-TTTTTT-CAAT
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11433 14 -     21811 tctt-tctttt-caat
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36888 14 +     42204 TCTC-TTTTTT-CAAT
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973891 14 +  28871421 tatt-tctttt-caat
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1829 14 -      8028 tatt-tctttt-caat
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20270486 14 -  38429054 TCTC-TTTGTT-CAAT
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             10322 14 -     91421 TCTC-TCTTTT-CAAT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7604450 14 +   7812017 TCTC-TCTTTT-CAAT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10291 14 -     72585 TCTC-TCTTTT-CAAT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5344 14 +     55207 TCTC-TCTTTT-CAGT
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 228 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        367037 14 -   3329780 tctt-tctttt-caat
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             2006 14 -     11128 TCTC-TCGTTT-CAAT
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91231361 14 - 195417433 TCTC-TCTTTT-CAAT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7667010 14 +   7961872 TCTC-TCGTTT-CAAT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84881 14 -     96226 TATT-TCTTTT-CAAT
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       3976  3 +      4321 -------------AGT
i Saiga_tatarica.SaiTat_scaffold_373180                  I 209 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151564 11 -    313613 TC----CTTTT-CAAT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          14834 14 -     19888 TCTC-TCTTTT-CAAT
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      22036 14 +     39453 TCTC-TCTTTT-CAAT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2562 14 +     27826 TCTC-TCTTTT-CAAT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             2083 14 -     19483 TCTC-TCTTTT-CAAT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      2145 14 +      7198 TCTC-TCTTTT-CAAT
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         10405 14 +     15514 TCTC-TCTTTT-CAAT
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187881 14 -    191337 TCCT-TCTTTG-CAAT
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13647425 14 -  18376816 tatc-atttat-aaat
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1948431 14 -   3870691 TTTC-ACTTTT-CACT
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27426 14 +     97271 TCTC-TTTTTT-CAAT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14417 14 -    196729 TCTC-TTTGTT-CAAT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   62882673 14 -  69701581 TCTC-TCTTTT-CAGT
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1088591 14 -   1523678 TCTT-TCTTTT-CAAT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 7032 14 +     41958 TCTT-TCTTTT-CAAT
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69688 14 +    116680 TCTC-TCTTTT-CAGG
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115418 14 -    156842 TCTC-TCTTTT-CAAT
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383873 14 +    539355 TCTC-TCTTTT-TAAT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10868 14 +     70052 CTTC-TCTTTT-CAAT
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               15173 14 +     25099 TTTC-TCTTTT-CAAT
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186423408 14 + 186847797 TCTC-TCTTTT-CAAT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103658 14 +    114563 TGGC-TCTTTT-CAAT
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   2058 14 +      8208 TCTC-TCTTTT-CAAT
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     79181 14 +    610378 CCTT-TCTTTT-CAAT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          6136 14 -     20410 TCTC-TCTTTT-CAAT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    10332 14 +     15221 TCTC-TCTTTT-CAAT
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        6237 14 +     19930 TCTC-TCTTTT-CAAT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2667 14 -     19997 TCTC-TCTTTT-CAAT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42786 14 -     60166 TCTC-TCTTTT-CAAT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        10259 14 -     27529 TCTC-TCTTTT-CAAT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     10199 14 -     18194 TCTC-TCTTTT-CAAT
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3934 14 -     21137 TCTC-TCTTTT-CAAT
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2637 14 -     10723 TCTC-TCTTTT-CAAT
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1789 14 +      9834 TCTC-TCTTTT-CAAT
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        20107 14 +     32220 TCTC-TCTTTT-CAAT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5934204 14 +   6242583 TCTC-TCTTTT-CAAT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        3451 14 +     20839 TCTC-TCTTTT-CAAT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                   1011 14 -      1748 TCTC-TCTTTT-TAAT
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 C 0
s Tupaia_chinensis.KB320699.1                              2150621 14 +   4065304 TCTC-TTTTCC-TAAC
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     3919 14 -     10553 TCTC-TTTCCC-TAAT
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737941 14 +  33153633 TCTC-tcttta-aaat
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   51769 12 -     77625 TCG---CTTTT-CAAT
i Uropsilus_gracilis.UroGra_scaffold_12083               I 4 I 40
s Ursus_maritimus.KK499267.1                               4847131 14 -   5085361 TCTC-TTTTTT-CAAT
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   7255 14 +     50397 CTTC-TTTTTT-CAAT
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              7303 14 +     24756 CTTC-TTTTTT-CAAT
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368622 14 -   5488506 CCTC-TCTTTC-CAAT
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7598 14 -     43706 TCTC-TTTTTT-CAAT
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19932 14 -     24430 TTTC-ATTTTT-CAAT
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          2051 14 +      2932 TCTC-TTTTTT-CAAT
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      10203 13 +     63895 CCTC-TCTT-T-CAGT
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11633 14 +     12536 TCTC-TCTTTT-CAAT
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lepilemur_septentrionalis.k141_185316                      22934  4 +     54090 I
e Lepilemur_ruficaudatus.k141_582783                           754 56 -      1589 I
e Lepilemur_dorsalis.k141_577674                             24879  4 +     45836 I
e Lepilemur_ankaranensis.k141_596936                          6932  4 -     23766 I
e Kogia_breviceps.KogBre_flattened_line_192630                1875  2 -      3359 I
e Galagoides_demidoff.k141_31856                              3217  0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1845 23 +     62944 A-A------GTT---TCT-CATTCA-AACAA-ACTG
s Acinonyx_jubatus.LLWD01001279.1                           823486 24 -   1699592 G-A------CTT--TTCA-CATCTT-AACAA-AGTG
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507207 24 -  29979442 G-G------CTT--TTCA-CATCCA-AGTAA-ACTG
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             75806 24 -    347723 G-A------CGT--TTTA-CATCCA-AGCAA-ACTG
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     65195 24 -     89534 G-G------GTT--TTAT-CATCCA-AGAAA-AGCT
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9845 23 -     52922 A-A------GTT---TCT-CGTTCA-AACAA-AGTG
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9776 23 -     28001 A-A------GTT---TCT-CGTTCA-AACAA-AGTG
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                           222 23 -     18505 A-A------GTT---TCT-CGTTCA-AACAA-AGTG
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           1071 23 -     12518 A-A------GTT---TCT-CGTTCA-AACAA-AGTG
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675587 24 -   2318259 G-A------GTT--TTCT-CATCCA-AGCAA-AATG
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183333 24 +    412891 T-A------GTT--TTCT-CATCTA-ACTAA-AGTG
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             98068 24 -    100397 G-A------GTT--TTCT-CATCCA-AGCAA-AGTG
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7485 24 +     20879 G-T------GTT--TTCT-CATCTG-AGAAA-AGTG
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14646 24 +     17124 G-A------CTT--TTCA-CATCCA-AGCAA-AGTG
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2690 24 +     43469 T-A------GTT--TTCT-CATCTA-ACTAA-AGTG
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  49523 24 -     92717 G-A------ATT--TTCC-CATCCA-AGCAA-AGTG
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              50148 24 +     85213 G-A------ATT--TTCC-CATCCA-AGCAA-AGTG
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191812 24 +  23207421 G-A------GTT--TTCT-CATCCA-GGCAA-AGTG
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2277 24 -     18090 G-A------GTT--TTCT-CATCCA-GGCAA-AGTG
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26509 24 +     34529 G-A------GTT--TTCT-CATCCA-AGCAA-AGTG
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    199566 24 -    288883 A-A------GTT--TTCT-CATCCA-AGCAA-AGTG
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20272771 24 +  48749331 A-A------GTT--TTCT-CATCCA-AGCAA-AGTG
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1125327 24 -   1948126 A-A------GTT--TTCT-CATCCA-AGCAA-AGTG
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18083409 24 +  45695690 A-A------GTT--TTCT-CATCCA-AGCAA-AGTG
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2819076 24 +   4408762 G-A------GTT--TTTT-CATCCA-AGCAA-AGTG
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9999145 24 -  17673402 C-A------GTT--TTCT-TATCCA-AGCAA-AGTA
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331609 24 -   7040546 C-A------GTT--TTCT-TATCCA-AGCAA-AGTA
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399885 24 -   1652518 C-A------GTT--TTCT-TATCCA-AGCAA-AGTA
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17795989 18 -  60362399 G-A------CTT--CTCA-CATCTA-AGC-------
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182046 18 -    185531 G-A------CTT--CTCA-CATCTA-AGC-------
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031432 18 -   9314153 G-A------CTT--CTCA-CATCTA-AGC-------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955697 18 -  59632846 G-A------CTT--CTCA-CATCTA-AGC-------
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18496997 18 +  63665305 G-A------CTT--CTCA-CATCTA-AGC-------
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18829705 24 +  46296322 G-A------GTT--TTCT-CATCCA-AGCAA-AGTG
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18060425 24 -  44709034 G-A------GTT--TTCT-CATCCA-AGCAA-AGTG
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           141268 24 -    496798 G-A------GTT--TTCT-CATTCA-AGCAA-AGTG
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                3107 24 -     11696 T-A------GTT--TTCT-CATCTA-ACTAA-AGTG
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133863 24 +    179628 A-G------GTT--TTCT-TATATA-AGCAA-AGTG
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89470 24 +    217609 G-A------GTT--TTCA-CGGCCA-AGCAA-AGTG
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18347866 24 -  23392119 T-A------GTT--TTTT-CATCCA-AACAA-AGTG
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18360126 24 -  23407841 T-A------GTT--TTTT-CATCCA-AACAA-AGTG
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        99000 24 +    143979 T-A------TTT--TTTT-CATCCA-AACAA-AGTG
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         5183 24 -      8605 G-A------GTT--TTCT-CATTCA-AGCAA-AGTG
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12228103 24 +  27778364 G-A------GTT--TTCT-CATCCA-CTCAA-GGTG
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2821 24 -      3715 G-A------GTT--TTCT-CATCCA-CTCAA-GGTG
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470805 23 +   4669795 A-A------GTT---TCT-CGTTCA-AACAA-AGTG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         9354 23 -     19203 A-A------GTT---TCT-CGTTCA-AACAA-AGTG
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3775 23 +      8260 A-A------GTT---TCT-CGTTCA-AACAA-AGTG
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           4003 23 +     27781 A-A------GTT---TCT-CGTTCA-AACAA-AGTG
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         4161 23 -     20310 A-A------GTT---TCT-CGTTCA-AACAA-AGTG
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           7145 23 +     29689 A-A------GTT---TCT-CGTTCA-AACAA-AGTG
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            1583 23 +      9989 A-A------GTT---TCT-CGTTCA-AACAA-AGTG
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9829 23 -     27936 A-A------GTT---TCT-CGTTCA-AACAA-AGTG
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9855 23 -     11289 A-A------ATT---TCT-CGTTTA-AACAA-AGTG
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38812227 23 +  39242232 A-A------GTT---TCT-CGTTCA-AACAA-AGTG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217926 23 -  21565898 A-A------GTT---TCT-CGTTTA-AACAA-AGTG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       35041 23 -     53127 A-A------GTT---TCT-CATTTA-AACAA-AGTG
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        2330 23 +      7159 A-A------GTT---TCT-CGTTCA-AACAA-AGTG
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9848 23 -     27947 A-A------GTT---TCT-CGTTTA-AACAA-AGTG
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9824 23 +     17596 A-A------GTT---TCT-CGTTTA-AACAA-AGTG
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         40324 23 -     41420 A-A------GTT---TCT-CGTTCA-AACAA-AGTG
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            5011 24 -      6351 G-A------GTT--TTCT-CATCCA-AGCAA-AACG
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16939 24 -     52598 G-A------ATT--TTCA-CATCCA-AGCAA-AGTG
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12289 24 +     57038 G-A------ATT--TTCA-CATCCA-AGCAA-AGTG
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1251214 17 +   2543920 ----------------TT-CATCTA-AGCAA-AGTG
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18423787 23 -  18827391 A-A------GTT---TCT-CGTTCA-AACAA-AGTG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       10228 23 -     50209 A-A------GTT---TCT-CATTCA-AACAA-AGTG
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135417236 23 + 135778131 A-A------GTT---TCT-CGTTCA-AACAA-AGTG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15392 24 +     19366 G-A------GTT--TTCT-CATCCA-AGCAA-AAGG
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170491 24 +    839153 G-A------GTT--TTCT-CATCCA-AGCAA-AAGG
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_172426               9873 24 -     10935 T-A------GTT--TTCT-CATCTA-AGTAA-AGTA
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          C 0 C 0
s Colobus_angolensis.KN981557.1                            1905762 23 +   2368649 A-A------GTT---TCT-CATTCa-aacaa-agtg
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199945432 23 + 200372422 A-A------GTT---TCT-CATTCA-AACAA-AGTG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              32303 23 +     84244 A-A------GTT---TCT-CATTCA-AACAA-AGTG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17546517 24 -  53390261 G-A------AAT--TTCT-TACTCA-AGCAA-AGTG
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10730 24 -     20389 T-A------GTT--TTCT-CATCTA-AGCAA-AGCA
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_283822              2859 30 +      4330 A-TCTAACTGTT--CTAT-CATCCA-GGAAA-AGTA
i Crocidura_indochinensis.CroInd_scaffold_283822         I 18 I 846
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24435 24 -     87169 C-A------CTT--TTCA-CATCCC-AACAA-AGTG
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 3282 24 +      5455 T-A------GTT--TTTT-CATCCA-AACAA-AGTG
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1633 24 +      3576 T-A------ATC--TTTT-CATTCC-ATCAA-AGTG
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            61281 24 +   2246927 G-A------GTT--TTCT-CATCCA-AGCAA-CATG
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12533111 23 -  12879189 G-A------ATT--TTCA-CATCTA-AGCAA-AGT-
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811447 24 +  35494412 G-A------GTT--TTCT-CAACCA-GGCAA-AGTG
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8628139 24 +  20541912 t-a------gttt--tct-catcta-acTGA-AGTG
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669953 24 +   1390856 G-A------GTT--TTCT-CATCCA-CTCAA-GGTG
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2711 24 +    198055 G-A------GTT--TTCT-CATCCA-CTCAA-GGTG
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34692 24 +     67921 T-A------GTT--TCTT-CATCCA-AACAA-AGTG
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18896017 25 +  37912305 g-g------attt--ttttaatcca-agcaA-GATG
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  12235 25 +     14536 G-G------ATT--TTTTTAATCCA-AGCAA-GATG
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31879 23 -     42551 T-A------GTT--T-TT-CATCCA-AACAA-AGTG
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE759718.1                                   7637 24 +     11740 t-a------attt--tcc-TAACTA-AATAA-AGTG
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310739 24 +    607251 G-A------GTT--TTCT-CATCCA-AGCAA-AGTG
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1089236 24 +  10337057 A-A------GTT--TTCT-CAATCA-AATAA-AGCA
i Elephantulus_edwardii.JH947257.1                       C 0 I 3
s Enhydra_lutris.KZ291758.1                               16325993 24 -  41312741 G-A------CTT--TTGA-CATCCA-AGCCA-ACTG
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144289 13 -  14770903 ---------------------tcca-AGCAA-AGAG
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1279990 24 +   4378816 G-A------GTT--TTCT-CACCCA-AGGAA-AGTG
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527811 24 -  39960074 G-A------GTT--TTCT-CACCCA-AGGAA-AGTG
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29826 24 +    498745 G-A------GTT--TTCT-CACCCA-AGGAA-AGTG
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3325527 24 -   7059049 G-A------GTT--TTCT-CTTCCA-AACAA-CACA
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21200418 23 -  21539334 A-A------GTT---TCT-CGTTCA-AACAA-AGTG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11123 24 +    133382 G-A------GTT--TTCT-CATCCA-GGCAA-AGTG
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             25060 24 -     44125 G-A------GTT--TTCT-CATCCA-GGCAA-AGTG
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Eulemur_albifrons.k141_342033                               9619 24 -     14127 G-A------ATT--TTCA-CATCCA-AGCAA-AGTG
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                2317 24 -     16928 G-A------ATT--TTCA-CATCCA-AGCAA-AGTG
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              11350 24 -     25546 G-A------ATT--TTCA-CATCCA-AGCAA-AGTG
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             8535 24 +     26330 G-A------ATT--TTCA-CATCCA-AGCAA-AGTA
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                  9792 24 +     23973 G-A------ATT--TTCA-CATCCA-AGCAA-AGTG
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 8535 24 +     75513 G-A------ATT--TTCA-CATCCA-AGCAA-AGTA
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  6487 24 +     97555 G-A------ATT--TTCA-CATCCA-AGCAA-AGTG
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                             9413 24 +     26496 G-A------ATT--TTCA-CATCCA-AGCAA-AGTG
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_754848                                  18704 24 +     18826 G-A------ATT--TTCA-CATCCA-AGCAA-AGTG
i Eulemur_rufus.k141_754848                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                               9598 24 +    111500 G-A------ATT--TTCA-CATCCA-AGCAA-AGTG
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20233356 24 + 206538554 G-A------CTT--TTCA-CATCCT-AACAA-AGTG
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20192186 24 + 205367284 G-A------CTT--TTCA-CATCCT-AACAA-AGTG
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  5711 24 -     36744 G-A------CTT--TTCA-CATCCT-AACAA-AGTG
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25675 24 +     26054 G-A------ATT--TTTT-CATCTA-AGCAA-AGTG
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     608705 24 -    660261 G-A------GTT--TTCT-CATCCA-AGCAA-AGTG
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30565 24 +     49224 G-G------ATT--TTCT-CAGCCA-GGCAA-AGAG
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              11080 23 -     32273 A-A------GTT---TCT-CATTCA-AACAA-ACTG
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186333228 23 + 186649187 A-A------GTT---TCT-CATTCa-aacaa-actg
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   30289 24 +     78134 G-G------ATT--TTCT-CAGCCA-GGCAA-AGTG
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           2684 24 -     19426 G-A------ATT--TTCA-CAACCA-AGCAA-AGTG
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              7828 24 -     15286 G-A------ATT--TTCA-CAACCA-AGCAA-AGTG
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                              9466 24 +     18253 G-A------ATT--TTCA-CAACCA-AGCAA-AGTG
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                          9569 24 -     41752 G-A------ATT--TTCA-CAACCA-AGCAA-AGTG
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                          9402 24 -     16460 G-A------ATT--TTCA-CAACCA-AGCAA-AGTG
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238351 22 +    327341 C-A------CT----TCA-CATCCC-AACAA-AGTG
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17909 24 +     36099 G-A------GTT--TTCT-CATCCA-AGCAA-AGTG
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20659787 24 +  22651954 T-A------GTT--TTTA-CATCCA-AGCAA-AGTG
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 471  7 +       961 A-A------GTT--CT--------------------
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 I 4
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112260 24 +    128679 G-A------GTT--TTCT-CATCCA-AGCAA-AGTA
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108504 24 +   1711038 T-A------GTT--TTTC-CATCCA-AGCAA-AGTG
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39945 24 +     43066 T-A------GTT--TTTC-CATCCA-AGCAA-AGTG
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    429975 23 +    630532 A-A------GTT---TCT-CATTCA-AACAA-ACTG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40825 24 +     55795 C-A------CTT--TTCA-TATCCC-AACAA-AGTG
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20255 24 -    143317 T-A------GTT--TTTT-CATCCA-AATGA-ATTG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_307679                               12906 23 -     15490 A-A------GTT---TCT-CATTCA-AACAT-ACTG
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              54911 23 +     67168 A-A------GTT---TCT-CATTCA-AACAT-ACTG
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189538561 23 - 191637585 A-A------GTT---TCT-CATTCA-AACAT-ACTG
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3331454 23 -  11177569 A-A------GTT---TCT-CATTCA-AACAT-ACTG
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      81351 24 +    135385 G-G------TTT--TTCT-CATCCA-AGCAA-AGTG
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514807 24 -   7955117 G-G------GTT--TTCC-TTTCTG-AGCAA-AGTG
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   18385 24 +     31101 G-A------ATT--TTTA-CATCCA-AGCAA-AGTG
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22664 24 +     23964 G-A------GTT--TTCT-CAACCA-GGCAA-AGTG
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271589 24 -   9596543 G-G------GTC--TTAT-CATCCA-AGATA-AACT
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                1877  9 -      3359 --------------------------ggcgc-actg
i Kogia_breviceps.KogBre_flattened_line_192630           I 2 I 164
s Lasiurus_borealis.LasBor_scaffold_32767                    12699 24 -     42476 T-C------GTT--TTCT-CCTCCA-AGCAA-AGAG
i Lasiurus_borealis.LasBor_scaffold_32767                I 14 C 0
s Lemur_catta.scaffold_24                                 15519928 24 -  30322482 G-A------ATT--TTCA-CAACCA-AGCAA-AGTG
i Lemur_catta.scaffold_24                                C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3036326 25 +   3914936 G-A------CCT--TTTA-CATCCA-AGCAAAACTG
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             267716 24 -    662738 G-A------GTT--TTCT-CAACCA-GGCAA-AGTG
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1432349 23 +   1826925 A-A------GTT---TCT-CATTCA-AGCAA-AGTA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             907 24 +     11245 G-A------CTT--TAAA-CATCCA-AACAA-AGCG
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999744 24 +   6120653 G-A------CTT--TAAA-CATCCA-AACAA-AGCG
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214744 24 -  43346337 G-A------GTT--CTCT-TATCCA-AGCAA-AGTG
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951937 18 -  59628241 G-A------CTT--CTCA-CATCTA-AGC-------
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               2170 23 +     40492 A-A------GTT---TCT-CGTTCA-AACAA-AGTG
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59671425 23 +  60120075 A-A------GTT---TCT-CGTTCA-AACAA-AGTG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7925 23 -     26193 A-A------GTT---TCT-CGTTCA-AACAA-AGTG
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75722 23 -    114318 A-A------GTT---TCT-CGTTCA-AACAA-AGTG
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  1437 23 -     23192 A-A------GTT---TCT-CGTTCA-AACAA-AGTG
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10890 23 -     29190 A-A------GTT---TCT-CGTTCA-AACAA-AGTG
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  19457 23 +     37952 A-A------GTT---TCT-CGTTCA-AACAA-AGTG
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834545 23 + 187317192 A-A------GTT---TCT-CGTTCA-AACAA-AGTG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25453108 23 -  25927173 A-A------GTT---TCT-CGTTCA-AACAA-AGTG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  75306 23 +     89720 A-A------GTT---TCT-CGTTCA-AACAA-AGTG
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 2304 23 +     20474 A-A------GTT---TCT-CGTTCA-AACAA-AGTG
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   2105 23 -     14993 A-A------GTT---TCT-CGTTCA-AACAA-AGTG
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  324977 23 -    668171 A-A------GTT---TCT-CGTTCA-AACAA-AGTG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                  408 23 -     24072 A-A------GTT---TCT-CGTTCA-AACAA-AGTG
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               21044 23 -     45290 A-A------GTT---TCT-CGTTCA-AACAA-AGTG
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87746 21 +     94391 T-A------GTT--TTCC-TA---A-AACAA-AGTG
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23932593 23 -  24302211 A-A------GTT---TCT-CGTTCA-AACAA-AGTG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346770 23 +    752769 A-A------GTT---TCT-CGTTCA-AACAA-AGTG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15813 24 +    737560 G-A------ATT--TTCT-CATCCA-AGCAA-AATG
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              47202 24 -    317179 G-A------ATT--TTCT-CATCCA-AGCAA-AATG
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097657 24 -  40650429 G-G------GTT--TTCC-TATCTG-AGCAA-AGTA
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         7011 24 -    207569 T-A------GTT--TTCT-CATCCA-ATCAA-AGTG
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6706 24 +     13704 G-A------CTC--TTTA-CATCCA-AGCAA-ACTG
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3332 24 +     10310 G-A------GTT--TTCT-CATCCA-GGCAA-AGTG
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18287324 24 -  93316391 G-A------ATT--TTCA-TGTCCA-AGCAA-AGTG
i Microcebus_murinus.CM007674.1                          I 3781 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    15865 24 -    145209 G-A------GTT--TTAG-AATCTA-AGCAA-AGTG
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13650 24 -     19307 T-A------GTT--TTCT-CATCTA-ACTAA-AGTG
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849524 24 +   8254450 T-A------GTT--TTCT-CATCCA-AGCAA-AGAG
i Miniopterus_natalensis.LDJU01000034.1                  I 199 T 199
s Miniopterus_schreibersii.MinSch_scaffold_18080             33201 24 +     64694 T-A------GTT--TTCT-CATCCA-AGCAA-AGAG
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           4343 23 -     28506 A-A------GTT---TCT-CGTTCA-AACAA-AGTG
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62656 25 -     63350 G-A------CCT--TTTA-CATCCA-AGCAAAACTG
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      4892 24 -     37649 G-A------ATT--TTCA-CATCCA-AGCAA-AGTG
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26837 24 -    437263 G-A------GTT--TTCT-CAACCA-GGCAA-AGTG
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138054 24 -    366855 T-A------GTT--TTCT-CATCTA-GCTGA-AGTG
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                    790 24 +     82753 G-A------GTT--TTCT-CATCCA-AGCAA-AGTG
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31557 24 +     37127 C-C------CTT--TTCA-CACCCC-AACAA-AGTG
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5349 24 +     14753 T-C------ATT--TTCT-CCTCCA-AGCAA-AGAG
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2558 25 +     14296 G-G------ATT-TTTCT-CAGCCA-GGCAA-AATG
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               297891 24 -  14710649 g-a------cttt--tta-CGTCCA-AGCAA-ACTG
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                278521 24 -  10118263 t-c------attt--tcT-CCTCCA-AGCAA-AGAG
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1586076 24 -   6019432 t-c------attt--tcT-CCTCCA-AGCAA-AGAG
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902285 24 -   4330536 t-c------attt--tCT-CCTCCA-AGCAA-AGAG
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32845 24 +     33610 T-C------ATT--TTCT-CCTCCA-AGCAA-AGAG
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186340 25 +    196477 G-G------GGT--TTCT-CATCCAAAACAA-AATG
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025718 20 -   3037898 G-G------ATT--TTCT-CATCCA-----A-AGTA
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               10343 23 +     21681 A-A------GTT---TCT-CATTCA-AACAA-AGTG
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865793 24 +   7148211 g-a------gttt--tct-caACCA-GGCAA-AGTG
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756612 24 +    783361 T-A------GTT--TTCT-CGTTTA-ACTAA-AGTG
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146198 18 -   9404916 G-A------CTT--CTCA-CATCTA-AGC-------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102574711 24 - 196305487 G-A------CTT--TAAA-CATCCA-AACAA-AGCA
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2397 24 +      8486 G-A------CTT--TAAA-CATCCA-AACAA-AGCA
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105745138 24 + 199412804 G-A------CTT--TAAA-CATCCA-AACAA-AGCA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1355981 26 +   3988456 g-a------ttttttttt-tatcca-agcaa-aata
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              500943 25 -   2017862 a-a------tttt--tta-catCCA-AGCAAAACTG
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         145110 24 +    630418 G-A------GTT--TTCT-CATCCA-AGCAA-AGTG
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          76621 24 -    150152 G-A------GTT--TTCT-CATCCA-AGCAA-AGTG
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  2781708 24 -  10937097 g-a------gttt--tct-caACCA-GGCAA-AGTG
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               7295 24 -     18566 G-A------GTT--TTCT-TATCCA-AGCAA-GATA
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       458951 18 -    559221 G-A------CTT--CTCA-CATCTA-AGC-------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17585884 24 +  44047080 G-A------GTT--TTCT-CATCCA-AGCAA-AGTG
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173861 24 -    191736 G-A------GTT--TTCT-CATCCA-AGCAA-AGTG
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    39197 23 +     80009 A-A------GTT---TCT-CATTCa-aacaa-actg
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189138090 23 + 189151597 A-A------GTT---TCT-CATTCa-aacaa-actg
i Pan_troglodytes.CM009242.2                             C 0 I 192
s Panthera_onca.PanOnc_flattened_line_3271                  147336 24 +    230217 G-A------CTT--TTCA-CATCCT-AACAA-AGTG
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                260045 24 +  18783137 G-A------CTT--TTCA-CATCCT-AACAA-AGTG
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4717192 24 -   8748460 G-A------CTT--TTCA-CATCCT-AACAA-AGTG
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1264794 24 -   2937107 G-A------GTT--TTCT-CATCCA-AGCAA-AGTG
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183438378 23 + 183742232 A-A------GTT---TCT-CGTTCA-AACAA-AGTG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             2071 23 +     20448 A-A------GTT---TCT-CGTTCA-AACAA-AGTG
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20558876 23 +  20919399 A-A------GTT---TCT-CGTTCA-AACAA-AGTG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                    814 23 +     41871 A-A------GTT---TCT-CGTTCA-AACAA-AGTG
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     4100 23 +     27711 A-A------GTT---TCT-CGTTCA-AACAA-AGTG
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  4185 23 +      9205 A-A------GTT---TCT-CGTTCA-AACAA-AGTG
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9073 24 -     78924 G-A------CTT--TTCA-CATCCC-AGCTA-AGTG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            4882 24 +     13100 G-A------CTT--TTCA-CATCCA-AGCAA-AGCA
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             3250 24 +     25941 G-A------CTT--TTCA-CATCCA-AGCAA-AGCA
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25495 24 +     32600 A-G------ATT--TTCT-CATCCA-AGGAA-AGTG
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     26242 24 -     29689 T-A------CTT--TCGT-CATCCA-AGCAA-AGTA
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8755 24 +     63832 G-A------GTT--TTCT-CAACCA-GGCAA-AGTG
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38855 23 +     62158 A-A------GTT---TCT-CATTCA-AACAA-AGTG
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33577 23 +     89929 A-A------GTT---TCT-CATTCA-AACAA-AGTG
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            34993 23 +     51399 A-A------GTT---TCT-CATTCA-AACAA-AGTG
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14291229 23 -  14605196 A-A------GTT---TCT-CATTCA-AACAA-AGTG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              669 11 +     22620 ---------------------TCCA-AGCA---GAG
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34461 24 +     35617 G-A------GTT--TTCT-CATCCA-GGCAA-AGTG
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189126278 23 + 189387572 A-C------GTT---TCT-CATTCa-aacaa-actg
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9565884 23 +   9816681 A-C------GTT---TCT-CATTCA-AACAA-ACTG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68504 23 -     81375 A-A------GTT---TCT-CATTCA-AACAA-AGTG
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                               325 23 +     19060 A-A------GTT---TCT-CATTCA-AACAA-AGTG
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 10220  7 -     22811 A-A------GTT--CT--------------------
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 I 4
s Prolemur_simus.MPIZ01000396.1                            2592581 24 -   4620579 g-a------attt--tca-caaccA-AGCAA-AGTG
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986594 24 +   2598838 G-A------ATT--TTCC-CATCCA-AGCAA-AGTG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          24883 24 +     38485 G-A------ATT--TTCC-CATCCA-AGCAA-AGTG
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             1044 24 +      4256 G-A------ATT--TTCC-CATCCA-AGCAA-AGTG
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22402 24 +     35766 G-A------ATT--TTCC-CATCCA-AGCAA-AGTG
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            585 24 -     24134 G-A------ATT--TTCC-CATCCA-AGCAA-AGTG
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24397 24 -     67325 G-A------ATT--TTCC-CATCCA-AGCAA-AGTG
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            642 24 -      6182 G-A------ATT--TTCC-CATCCA-AGCAA-AGTG
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11447 24 -     21811 t-a------gttt--tct-catcta-acTGA-AGTG
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36902 24 +     42204 G-A------CTT--TTGA-CATCCA-AGCAA-ACTG
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973905 24 +  28871421 t-a------attt--tcc-TATCTA-AACAA-AGTG
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1843 24 -      8028 t-a------attt--tcc-TATCTA-AACAA-AGTG
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20270500 24 -  38429054 A-A------CTT--TTCA-CATCCT-AACAA-AGTG
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             10336 23 -     91421 A-A------GTT---TCT-CATTCA-AACAA-AGTG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7604464 23 +   7812017 A-A------GTT---TCT-CATTCA-AACAA-AGTG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10305 23 -     72585 A-A------GTT---TCT-CATTCA-AACAA-AGTG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5358 24 +     55207 G-A------GTT--TTCT-CATCCA-AGCAA-AGTG
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        367051 24 -   3329780 t-a------GTT--TTCT-CATCCA-AGCAA-AGTG
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             2020 23 -     11128 A-A------GTT---TCT-CATTCA-AACAA-AGTG
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91231375 23 - 195417433 A-A------GTT---TCT-CATTCA-AACAA-AGTG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7667024 23 +   7961872 A-A------GTT---TCT-CATTCA-AACAA-AGTG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84895 15 -     96226 T-A------ATT--TTCC-TAACTA-----------
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 4
s Saiga_tatarica.SaiTat_scaffold_373180                       3979 24 +      4321 G-A------GTT--TTCT-CATCCA-AGCAA-AGTG
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151575 24 -    313613 G-A------ATT--TTCT-CATCCA-AGCAA-AGTG
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          14848 23 -     19888 A-A------GTT---TCT-CATTCA-AACAA-AGTG
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      22050 23 +     39453 A-A------GTT---TCT-CATTCA-AACAA-AGTG
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2576 23 +     27826 A-A------GTT---TCT-CATTCA-AACAA-AGTG
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             2097 23 -     19483 A-A------GTT---TCT-CATTCA-AACAA-AGTG
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      2159 23 +      7198 A-A------GTT---TCT-CATTCA-AACAA-AGTG
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         10419 23 +     15514 A-A------GTT---TCT-CATTCA-AACAA-AGTG
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187895 24 -    191337 G-A------GTT--TTCT-AATCCA-AGGAA-AGTG
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13647439 24 -  18376816 a-a------gttt--tgt-GACCTA-ATAAA-AGTG
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1948445 24 -   3870691 G-G------GTT--TTCC-TATCTG-AGCAA-AGTA
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27440 24 +     97271 G-A------CTT--CTTA-CATCCA-AGCAA-ACTA
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14431 24 -    196729 C-C------CTT--TTCA-CATCCC-AACAA-AGTG
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   62882687 24 -  69701581 G-A------GTT--TTCT-CAGCCA-TGAAG-AGTA
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1088605 23 -   1523678 A-A------GTT---TCT-CATTCA-AACAT-ACTG
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 7046 20 +     41958 T-C------GTT--TTCT-CACCCA-----A-AGTG
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69702 19 +    116680 GGG------GGT--TTCT-CATCCAAAA--------
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115432 24 -    156842 G-A------ATT--TTCT-CATCCA-CGCAA-AGTG
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383887 24 +    539355 G-A------GTT--TTCC-CATCCA-CACAA-AGTG
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10882 24 +     70052 G-A------GTT--TTCT-CATTCA-AGCAA-AGTG
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               15187 24 +     25099 G-A------GTT--TTCT-CATTCA-AGCAA-AGTG
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186423422 23 + 186847797 A-A------GTT---TCT-CGTTCA-AACAA-AGTG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103672 24 +    114563 T-A------GTT--TCTT-CATCCA-AGTAA-AGTG
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   2072 24 +      8208 G-A------GTT--TTCT-CATCCA-AGCAA-AATG
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     79195 24 +    610378 T-A------GTT--TTCT-CATCTA-ACTAA-AGTG
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          6150 23 -     20410 A-A------GTT---TCT-CATTCA-AACAA-AGTG
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    10346 23 +     15221 A-A------GTT---TCT-CATTCA-AACAA-AGTG
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        6251 23 +     19930 A-A------GTT---TCT-CATTCA-AACAA-AGTG
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2681 23 -     19997 A-A------GTT---TCT-CATTCA-AACAA-AGTG
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42800 23 -     60166 A-A------GTT---TCT-CATTCA-AACAA-AGTG
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        10273 23 -     27529 A-A------GTT---TCT-CATTCA-AACAA-AGTG
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     10213 23 -     18194 A-A------GTT---TCT-CATTCA-AACAA-AGTG
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3948 23 -     21137 A-A------GTT---TCT-CATTCA-AACAA-AGTG
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2651 23 -     10723 A-A------GTT---TCT-CATTCA-AACAA-AGTG
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1803 23 +      9834 A-A------GTT---TCT-CATTCA-AACAA-AGTG
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        20121 23 +     32220 A-A------GTT---TCT-CATTCA-AACAA-AGTG
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5934218 23 +   6242583 A-A------GTT---TCT-CATTCA-AACAA-AGTG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        3465 23 +     20839 A-A------GTT---TCT-CATTCA-AACAA-AGTG
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                   1025 24 -      1748 G-A------GTT--TTCT-CATCTA-GACAA-AGTG
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 C 0
s Tupaia_chinensis.KB320699.1                              2150635 20 +   4065304 G-T------GTT--TATT-CATCCA-----A-AGAA
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     3933 20 -     10553 G-T------GTT--TATT-CATCCA-----A-AGTG
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737955 24 +  33153633 g-a------gttt--tct-caACCA-GGCAA-AGTG
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_97021                    2140 23 -      4736 G-A------TTT--TTCT-GATTCA-AGCAA--ATG
i Uropsilus_gracilis.UroGra_scaffold_97021               I 7 C 0
s Ursus_maritimus.KK499267.1                               4847145 24 -   5085361 G-A------CTT--TTCA-CATCCA-ACTAA-ACTG
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   7269 24 +     50397 G-A------ATT--TTCA-CAACCA-AGCAA-AGTG
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              7317 24 +     24756 G-A------ATT--TTCA-CAACCA-AGCAA-AGTG
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368636 24 -   5488506 C-A------GTT--TTCT-TATCCA-AGCAA-AGTA
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7612 18 -     43706 G-A------CTT--CTCA-CATCTA-AGC-------
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19946 24 -     24430 G-G------GTT--ATCT-TATCCA-AGCAA-AGTA
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          2065 25 +      2932 A-A------TTT--TTTA-CATCCA-AGTAAAACTG
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      10216 24 +     63895 G-G------ATT--TTCT-CATCCA-ACCTA-GGCT
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11647 24 +     12536 G-A------GTT--TTCT-CATCCA-GGCAA-AGTG
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lepilemur_septentrionalis.k141_185316                      22934  4 +     54090 I
e Lepilemur_ruficaudatus.k141_582783                           754 56 -      1589 I
e Lepilemur_dorsalis.k141_577674                             24879  4 +     45836 I
e Lepilemur_ankaranensis.k141_596936                          6932  4 -     23766 I
e Galagoides_demidoff.k141_31856                              3217  0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1868 18 +     62944 GAA-A-ATTCAGGTGATT----AT
s Acinonyx_jubatus.LLWD01001279.1                           823510 18 -   1699592 GAA-A-ATTGAGATTGTT----CA
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507231 18 -  29979442 GAA-A-ATTGAGATGGCT----CA
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             75830 18 -    347723 GAA-A-ATTGAGATGGCT----CA
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     65219 18 -     89534 GAA-A-ATTGAGATGATT----TA
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9868 18 -     52922 GAA-A-ATTCAGGTGATT----AT
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9799 18 -     28001 GAA-A-ATTCAGGTGATT----AT
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                           245 18 -     18505 GAA-A-ATTCAGGTGATT----AT
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           1094 18 -     12518 GAA-A-ATTCAGGTGATT----AT
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675611 18 -   2318259 GAA-A-ATTGAAATGGTT----CA
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183357 18 +    412891 GAA-A-ATTTAGATGGTT----CA
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 7
s Antilocapra_americana.AntAmePen_scaffold_12469             98092 18 -    100397 GAA-A-ATTGAAATGGTT----CA
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7509 18 +     20879 GAA-A-ATGGAGGTGATT----GA
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 8
s Arctocebus_calabarensis.k141_288239                        14670 18 +     17124 -AA-ACACTGAAGTGATT----CA
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2714 18 +     43469 GAA-A-ATTTAAATGGTT----CA
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 7
s Avahi_laniger.k141_765380                                  49547 18 -     92717 AAA-A-ATTGAGGGGATT----CA
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              50172 18 +     85213 AAA-A-ATTGAGGGGATT----CA
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191836 18 +  23207421 GAA-A-ATTGAAATGGCT----CA
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2301 18 -     18090 GAA-A-ATTGAAATGGCT----CA
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26533 18 +     34529 GAA-A-ATTGAAATGGTT----CA
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    199590 18 -    288883 GAA-A-ATTGAAATGGTT----CA
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20272795 18 +  48749331 AAA-A-ATTGAAATGGTT----CA
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1125351 18 -   1948126 GAA-A-ATTGAAATGGTT----CA
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18083433 18 +  45695690 AAA-A-ATTGAAATGGTT----CA
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2819100 18 +   4408762 GAA-A-ATTGAAAGGGTT----CA
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9999169 18 -  17673402 GAA-A-ATTGAAATTGTC----CA
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331633 18 -   7040546 GAA-A-ATTGAAATTGTC----CA
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399909 18 -   1652518 GAA-A-ATTGAAATTGTC----CA
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17796007 17 -  60362399 -AA-A-ATTGAGATGTTT----CA
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182064 17 -    185531 -AA-A-ATTGAGATGTTT----CA
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031450 17 -   9314153 -AA-A-ATTGAGATGTTT----CA
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955715 17 -  59632846 -AA-A-ATTGAGATGTTT----CA
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18497015 17 +  63665305 -AA-A-ATTGAGATGTTT----CA
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18829729 18 +  46296322 GAA-A-ATTGAAATGGTT----CA
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18060449 18 -  44709034 GAA-A-ATTGAAATGGTT----CA
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           141292 18 -    496798 GTA-A-ATTTAGGTGATC----CC
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                3131 18 -     11696 GAA-A-ATTTAAATGGTT----CA
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 7
s Castor_canadensis.CasCan_scaffold_2074                    133887 18 +    179628 GAA-A-ATTAAGGTGATT----TA
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 7
s Catagonus_wagneri.CatWag_scaffold_2839                     89494 10 +    217609 GCA-A-ATTGAG------------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 1
s Cavia_aperea.AVPZ01000300.1                             18347890 18 -  23392119 GGA-C-ATTGAAGTGATT----TA
i Cavia_aperea.AVPZ01000300.1                            C 0 I 8
s Cavia_porcellus.DS562891.1                              18360150 18 -  23407841 GGA-C-ATTGAAGTGATT----TA
i Cavia_porcellus.DS562891.1                             C 0 I 8
s Cavia_tschudii.CavTsc_scaffold_8919                        99024 18 +    143979 GGA-C-GTTGAAGTGATT----TA
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 I 8
s Cephalopachus_bancanus.k141_2037105                         5207 18 -      8605 GAA-A-ATTTAGGTGATC----CC
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12228127 18 +  27778364 GAA-A-ACTTAGATGATC----CA
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2845 18 -      3715 GAA-A-ACTTAGATGATC----CA
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470828 18 +   4669795 GAA-A-ATTCAGGTGATT----AT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         9377 18 -     19203 GAA-A-ATTCAGGTGATT----AT
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3798 18 +      8260 GAA-A-ATTCAGGTGATT----AT
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           4026 18 +     27781 GAA-A-ATTCAGGTGATT----AT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         4184 18 -     20310 GAA-A-ATTCAGGTGATT----AT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           7168 18 +     29689 GAA-A-ATTCAGGTGATT----AT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            1606 18 +      9989 GAA-A-ATTCAGGTGATT----AT
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9852 18 -     27936 TAA-A-ATTCAGGTGACT----AT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9878 18 -     11289 GAA-A-ATTCAGGTGATT----AT
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38812250 18 +  39242232 GAA-A-ATTCAGGTGATT----AT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217949 18 -  21565898 GAA-A-ATTCAGGTGATT----AT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       35064 22 -     53127 GAA-A-ATTCAGGTGATTGATTAT
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        2353 18 +      7159 GAA-A-ATTCAGGTGATT----AT
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9871 18 -     27947 GAA-A-ATTCAGGTGATT----AT
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9847 18 +     17596 GAA-A-ATTCAGGTGATT----AT
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         40347 18 -     41420 GAA-A-ATTCAGGTGATT----AT
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            5035 18 -      6351 GAA-A-ACTGAGATGATT----CA
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             16963 18 -     52598 AAC-A-ATTGAGGGGATT----CA
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12313 18 +     57038 AAC-A-ATTGAGGGGAGT----CA
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1251231 18 +   2543920 GAA-C-ATTGAAGTGACT----TA
i Chinchilla_lanigera.JH722012.1                         C 0 I 8
s Chlorocebus_aethiops.ctg25                              18423810 18 -  18827391 GAA-A-ATTCAGGTGATT----AT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       10251 18 -     50209 GAA-A-ATTCAGGTGATT----AT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135417259 18 + 135778131 GAA-A-ATTCAGGTGATT----AT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15416 18 +     19366 GAA-A-ATTGAGATGATT----CA
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170515 18 +    839153 GAA-A-ATTGAGATGATT----CA
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_172426               9897  9 -     10935 GAA-A-AATGA-------------
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          C 0 C 0
s Colobus_angolensis.KN981557.1                            1905785 18 +   2368649 aaa-a-attcaGGTGATT----AT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199945455 18 + 200372422 AAA-A-ATTCAGGTGATT----AT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              32326 18 +     84244 AAA-A-ATTCAGGTGATT----AT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17546541 18 -  53390261 AAA-C-AGTTCAGTGATT----CG
i Condylura_cristata.JH655891.1                          C 0 I 20
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10754 18 -     20389 GAA-A-ATTGAGATGGTT----CA
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_603213              1471 18 +      1923 GAA-A-TTTTAGATGATT----AA
i Crocidura_indochinensis.CroInd_scaffold_603213         I 38 I 18
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24459 18 -     87169 GAA-A-ATTGAGATGGTT----CA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 3306 18 +      5455 GAA-C-ACTGAGGTGATT----TA
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 I 8
s Dasyprocta_punctata.DasPun_flattened_line_206793            1657 18 +      3576 GAC-C-ATTGAGGTGATT----TA
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 I 59
s Dasypus_novemcinctus.JH564415.1                            61305 18 +   2246927 GAA-A-GTTGAGATGATT----CA
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12533134 18 -  12879189 GAA-A-ATTGAGGTGATT----CA
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811471 18 +  35494412 GGA-A-ATTGCAGTGGTT----CA
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8628163 18 +  20541912 GAA-A-ATTTAGATGGTT----CA
i Desmodus_rotundus.KZ672289.1                           C 0 I 7
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669977 18 +   1390856 GAA-A-ACTTAGATGATC----CA
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2735 18 +    198055 GAA-A-ACTTAGATGatc----ca
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34716 18 +     67921 CAA-C-ATTGAAGTGATT----TA
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 8
s Dipodomys_ordii.KN672350.1                              18896042 18 +  37912305 GAA-A-ATTGAGGTGCTT----TA
i Dipodomys_ordii.KN672350.1                             C 0 I 8
s Dipodomys_stephensi.DipSte_scaffold_75855                  12260 18 +     14536 GAA-A-ATTGAGGTGCTT----TA
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 I 8
s Dolichotis_patagonum.DolPat_scaffold_30833                 31902 18 -     42551 GAA-C-ATTGAAGTGATT----TA
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 I 8
s Eidolon_helvum.KE759718.1                                   7661 18 +     11740 GAA-A-ATTGAAATGATT----CA
i Eidolon_helvum.KE759718.1                              C 0 I 4
s Elaphurus_davidianus.JRFZ01104969.1                       310763 18 +    607251 GAA-A-ATTGAAATGGTT----CA
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1089263  5 +  10337057 ------AATGA-------------
i Elephantulus_edwardii.JH947257.1                       I 3 C 0
s Enhydra_lutris.KZ291758.1                               16326017 18 -  41312741 GAA-A-ATTGGGATGGCT----CA
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144302 18 -  14770903 GAA-A-ATCTAGATGGTT----CA
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1280014 18 +   4378816 GAA-A-ATTTAGATGATC----CA
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527835 18 -  39960074 GAA-A-ATTTAGATGATC----CA
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29850 18 +    498745 GAA-A-ATTTAGATGATC----CA
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3325551 18 -   7059049 GAA-A-ATTTAGATGATT----CA
i Erinaceus_europaeus.JH835339.1                         C 0 I 19
s Erythrocebus_patas.Contig38                             21200441 18 -  21539334 GAA-A-ATTCAGGTGATT----AT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11147 18 +    133382 GAA-A-ATTGAAATGGTT----CA
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             25084 18 -     44125 GAA-A-ATTGAAATGGCT----CA
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Eulemur_albifrons.k141_342033                               9643 18 -     14127 AAA-A-ATCGAGGGGATT----CA
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                2341 18 -     16928 AAA-A-ATCGAGGGGATT----CA
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              11374 18 -     25546 AAA-A-ATCGAGGAGATT----CA
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             8559 18 +     26330 AAA-A-ATCGAGGGGATT----CA
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                  9816 18 +     23973 AAA-A-ATCGAGGGGATT----CA
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 8559 18 +     75513 AAA-A-ATCGAGGGGATT----CA
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  6511 18 +     97555 AAA-A-ATCAAGGGGATT----CA
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                             9437 18 +     26496 AAA-A-ATCGAGGGGATT----CA
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_754848                                  18728 18 +     18826 AAA-A-ATCGAGGGGATT----CA
i Eulemur_rufus.k141_754848                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                               9622 18 +    111500 AAA-A-ATCGAGGGGATT----CA
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20233380 18 + 206538554 GAA-A-ATTGAGATTGTT----CA
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20192210 18 + 205367284 GGA-A-ATTGAGATTGTT----CA
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  5735 18 -     36744 GAA-A-ATTGAGATTGTT----CA
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25699 18 +     26054 AAA-A-CTTGAGATGACT----CA
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     608729 18 -    660261 GAA-A-ATTGAAATGGTT----CA
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30589 18 +     49224 GAA-A-AATGAGGTGATT----CG
i Glis_glis.GliGli_scaffold_19807                        C 0 I 8
s Gorilla_beringei.k141_3596273                              11103 18 -     32273 GAA-A-ATTCAGGTGATT----AT
i Gorilla_beringei.k141_3596273                          C 0 I 60
s Gorilla_gorilla.LT578341.1                             186333251 18 + 186649187 gaa-a-attcaGGTGATT----AT
i Gorilla_gorilla.LT578341.1                             C 0 I 60
s Graphiurus_murinus.GraMur_scaffold_10447                   30313 18 +     78134 GGA-A-AATGAGGTGATT----TA
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 8
s Hapalemur_alaotrensis.k141_170648                           2708 18 -     19426 AAA-A-ATTGAGGGGATT----CA
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              7852 18 -     15286 AAA-A-ATTGAGGGGATT----CA
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                              9490 18 +     18253 AAA-A-ATTGAGGGGATT----CA
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                          9593 18 -     41752 AAA-A-ATTGAGGGGATT----CA
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                          9426 18 -     16460 AAA-A-ATTGAGGGGATT----CA
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238373 18 +    327341 GAA-A-ATTGAGATGGTT----CA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17933 18 +     36099 GAA-A-ATTGAAATGGTT----CA
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20659811 18 +  22651954 GAA-T-ACTGAGGTGATT----TA
i Heterocephalus_glaber.JH602082.1                       C 0 I 7
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 482  9 +       961 GAA-A-AATGA-------------
i Heterohyrax_brucei.HetBruBak_scaffold_383740           I 4 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112284 18 +    128679 GAA-A-ATTGAAACGGTT----CA
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108528 18 +   1711038 GAA-A-ATTGAAATGGTT----CA
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               39969 18 +     43066 GAA-A-ATTGAGATGGCT----CA
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    429998 18 +    630532 GAA-A-ATTCAGGTGATT----AT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40849 18 +     55795 GAA-A-ATTGAGATTGTT----CA
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20279 18 -    143317 GAA-C-ATTGAGGTGATT----TA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 8
s Hylobates_agilis.k141_307679                               12929 18 -     15490 GAA-A-ATTCAGGTGATT----AT
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              54934 18 +     67168 GAA-A-ATTCAGGTGATT----AT
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189538584 18 - 191637585 GAA-A-ATTCAGGTGATT----AT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3331477 18 -  11177569 GAA-A-ATTCAGGTGATT----AT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      81375 18 +    135385 AAA-G-ATTGAGGTGATT----TA
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 8
s Ictidomys_tridecemlineatus.JH393364.1                    7514831 18 -   7955117 AAT-A-ATTGAGGTGTTT----TA
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 8
s Indri_indri.k141_3655594                                   18409 18 +     31101 AAA-A-ATTGAGGGGATT----CA
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22688 18 +     23964 GAA-A-ATTGCAGTGGTT----CA
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271613 18 -   9596543 GAA-A-ATTGAGCTGATT----TT
i Jaculus_jaculus.JH725527.1                             C 0 I 20
s Kogia_breviceps.KogBre_flattened_line_192630                2050 18 -      3359 taA-A-GCTGAAATGGTT----CA
i Kogia_breviceps.KogBre_flattened_line_192630           I 164 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    12723 18 -     42476 GAA-A-ATCTAGATGGTT----CA
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15519952 18 -  30322482 AAA-A-ATTGAGGGGATT----CA
i Lemur_catta.scaffold_24                                C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3036351 18 +   3914936 GAA-A-ATTGAGATGGCT----CA
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             267740 18 -    662738 GAA-A-ATTGCAGTGGTT----CA
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1432372 18 +   1826925 GAA-A-ATTCAGGTGATT----AT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             931 18 +     11245 -AA-ACACTGAAGTGATT----CA
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999768 18 +   6120653 -AA-ACACTGAAGTGATT----CA
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214768  9 -  43346337 GAA-A-AATGA-------------
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17951955 17 -  59628241 -AA-A-ATTGAGATGTTT----CA
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               2193 18 +     40492 GAA-A-ATTCAGGTGATT----AT
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59671448 18 +  60120075 GAA-A-ATTCAGGTGATT----AT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7948 18 -     26193 GAA-A-ATTCAGGTGATT----AT
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75745 18 -    114318 GAA-A-ATTCAGGTGATT----AT
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  1460 18 -     23192 GAA-A-ATTCAGGTGATT----AT
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10913 18 -     29190 GAA-A-ATTCAGGTGATT----AT
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  19480 18 +     37952 GAA-A-ATTCAGGTGATT----AT
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834568 18 + 187317192 GAA-A-ATTCAGGTGATT----AT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25453131 18 -  25927173 GAA-A-ATTCAGGTGATT----AT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  75329 18 +     89720 GAA-A-ATTCAGGTGATT----AT
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 2327 18 +     20474 GAA-A-ATTCAGGTGATT----AT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   2128 18 -     14993 GAA-A-ATTCAGGTGATT----AT
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  325000 18 -    668171 GAA-A-ATTCAGGTGATT----AT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                  431 18 -     24072 GAA-A-ATTCAGGTGATT----AT
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               21067 18 -     45290 GAA-A-ATTCAGGTGATT----AT
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87767 18 +     94391 GAA-A-ATTGAAATGATG----CA
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 4
s Mandrillus_leucophaeus.scaffold280                      23932616 18 -  24302211 GAA-A-ATTCAGGTGATT----AT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346793 18 +    752769 GAA-A-ATTCAGGTGATT----AT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15837 18 +    737560 TAA-A-ATTGAGATGATT----CA
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              47226 18 -    317179 TAA-A-ATTGAGATGATT----CA
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097681 18 -  40650429 AAT-A-ATTGAGGTGTTT----TA
i Marmota_marmota.CZRN01000018.1                         C 0 I 8
s Megaderma_lyra.MegLyr_scaffold_4542                         7035 18 -    207569 GAA-A-ATTGAGATGGTT----CA
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6730 18 +     13704 GAA-A-ATTGAGATGGCT----CA
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3356 18 +     10310 GAA-A-ATTGCAATGGTT----CA
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18287348 18 -  93316391 AAC-A-ATTGAGGGAATT----CA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    15889 10 -    145209 Gaaaa-aataa-------------
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 218
s Micronycteris_hirsuta.MicHir_scaffold_52381                13674 18 -     19307 GAA-A-ATGTTGATGGTT----CA
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 7
s Miniopterus_natalensis.LDJU01000034.1                    1849349 18 +   8254450 GGA-A-ATTTAGATGGTT----CA
i Miniopterus_natalensis.LDJU01000034.1                  T 199 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             33225 18 +     64694 GGA-A-ATTTAGATGCTT----CA
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           4366 18 -     28506 GAA-A-ATTCAGGTGATT----AT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62681 18 -     63350 GAA-A-ATTGAGATGGCT----CA
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      4916 18 -     37649 AAC-A-ATTGAGGGGATT----CA
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26861 18 -    437263 GGA-A-ATTGCAGTGGTT----CA
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138078 18 -    366855 GAA-A-ATTTAGATGGTT----CA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 7
s Moschus_moschiferus.MosMos_scaffold_13123                    814 18 +     82753 GAA-A-ATTGAAATGGTT----CA
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31581 18 +     37127 GAA-A-ATTGAGATGCTT----CA
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5373 18 +     14753 GAA-A-ATCTAGATGGTT----CA
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2583 17 +     14296 GGA-A-AATAAGGTG-TT----TA
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 8
s Mustela_putorius.JH418006.1                               297915 18 -  14710649 GAA-A-ATTGAGATGGTT----CA
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                278545 18 -  10118263 GAA-A-ATCTAGATGGTT----CA
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1586100 18 -   6019432 GAA-A-ATCTAGATGGTT----CA
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902309 18 -   4330536 GAA-A-ATCTAGATGGTT----CA
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32869 18 +     33610 GAA-A-ATCTAGATGGTT----CA
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186365 18 +    196477 AAA-A-AGTGAAATGATT----CA
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025738 18 -   3037898 GAA-A-GTTGAGGTGATT----TA
i Nannospalax_galili.KL204047.1                          C 0 I 10
s Nasalis_larvatus.k141_413338                               10366 18 +     21681 GAA-A-ATTCCGGTGATT----AT
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865817 18 +   7148211 AGA-A-ATTGCAGTGGTT----CA
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756636 18 +    783361 TTA-A-ATTCAGATGGTT----CG
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 7
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146216 17 -   9404916 -AA-A-ATTGAGATGTTT----CA
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102574735 18 - 196305487 -AA-ACACTGACGTGATT----CA
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2421 18 +      8486 -AA-ACACTGACGTGATT----CA
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105745162 18 + 199412804 -AA-ACACTGACGTGATT----CA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1356007 18 +   3988456 gaa-a-actaaattgATA----CA
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              500968 18 -   2017862 GAA-A-ATTGAGATGGCT----CA
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         145134 18 +    630418 GAA-A-ATTGAAATGGTT----CA
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          76645 18 -    150152 GAA-A-ATTGAAATGGTT----CA
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  2781732 18 -  10937097 CGA-A-ATTGCAGTGGTT----CA
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               7319  9 -     18566 GAA-A-AATGA-------------
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 I 41
s Otocyon_megalotis.JAEUCK010005147.1                       458969 17 -    559221 -AA-A-ATTGAGATGTTT----CA
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17585908 18 +  44047080 GAA-A-ATTGAAATGGTT----CA
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173885 18 -    191736 GAA-A-ATTGAAATGGTT----CA
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    39220 18 +     80009 gaa-a-attcaGGTGATT----AT
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.KZ622849.1                                 17398 18 +    110857 gaa-a-attcaGGTGATT----AT
i Pan_troglodytes.KZ622849.1                             I 171 I 636
s Panthera_onca.PanOnc_flattened_line_3271                  147360 18 +    230217 GAA-A-ATTGAGATTGTT----CA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                260069 18 +  18783137 GAA-A-ATTGAGATTGTT----CA
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4717216 18 -   8748460 GAA-A-ATTGAGATTGTT----CA
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1264818 18 -   2937107 GAA-A-ATTGAAATGGTT----CA
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183438401 18 + 183742232 GAA-A-ATTCAGGTGATT----AT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             2094 18 +     20448 GAA-A-ATTCAGGTGATT----AT
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20558899 18 +  20919399 GAA-A-ATTCAGGTGATT----AT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                    837 18 +     41871 GAA-A-ATTCAGGTGATT----AT
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     4123 18 +     27711 GAA-A-ATTCAGGTGATT----AT
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  4208 18 +      9205 GAA-A-ATTCAGGTGATT----AT
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9097 18 -     78924 GAA-A-ATTGAGATGGTT----CA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            4906 18 +     13100 -AA-ACACTGAAGTGATT----CA
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             3274 18 +     25941 -AA-ACACTGAAGTGATT----CA
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25519 18 +     32600 GAA-A-ATTGAGGTGATT----TA
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 I 8
s Petromus_typicus.PetTyp_scaffold_42190                     26266 18 -     29689 GAA-A-GTTAAAGTGATT----TA
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 I 307
s Phocoena_phocoena.PhoPho_flattened_line_24159               8779 18 +     63832 GGA-A-ATTGCAGTGGTT----CA
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38878 18 +     62158 AAA-A-ATTCAGGTGATT----AT
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33600 18 +     89929 AAA-A-ATTCAGGTGATT----AT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            35016 18 +     51399 AAA-A-ATTCAGGTGATT----AT
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14291252 18 -  14605196 AAA-A-ATTCAGGTGATT----AT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              680 18 +     22620 GAA-A-ATCTAGATGGTT----CA
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34485 18 +     35617 GAA-A-ATTGCAGTGGTT----CA
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189126301 18 + 189387572 gaa-a-attcaGGTGATT----AT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9565907 18 +   9816681 GAA-A-ATTCAGGTGATT----AT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68527 18 -     81375 GAA-A-ATTCCGGTGATT----AT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                               348 18 +     19060 GAA-A-ATTCCGGTGATT----AT
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 10231  9 -     22811 GAA-A-AATGA-------------
i Procavia_capensis.ProCapCap_scaffold_85530             I 4 C 0
s Prolemur_simus.MPIZ01000396.1                            2592605 18 -   4620579 AAA-A-ATTGAGGGGATT----CA
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986618 18 +   2598838 AAA-A-ATTGAGGGGATT----CG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          24907 18 +     38485 AAA-A-ATTGAGGGGATT----CG
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             1068 18 +      4256 AAA-A-ATTGAGGGGATT----CG
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22426 18 +     35766 AAA-A-ATTGAGGGGATT----CG
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            609 18 -     24134 AAA-A-ATTGAGGGGATT----CG
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24421 18 -     67325 AAA-A-ATTGAGGGGATT----CG
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            666 18 -      6182 AAA-A-ATTGAGGGGATT----CG
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11471 18 -     21811 GAA-A-ATTTAGATGGTT----CA
i Pteronotus_parnellii.KE909381.1                        C 0 I 7
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36926 18 +     42204 GAA-A-ATTGGGATGGTT----CA
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22973929 18 +  28871421 GAA-A-ACTGAAATGATT----CA
i Pteropus_alecto.KB030862.1                             C 0 I 4
s Pteropus_vampyrus.KN534172.1                                1867 18 -      8028 GAA-A-ACTGAAATGATT----CA
i Pteropus_vampyrus.KN534172.1                           C 0 I 4
s Puma_concolor.QAVW01001104.1                            20270524 18 -  38429054 GAA-A-ATTGAGATTGTT----CG
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             10359 18 -     91421 GAA-A-ATTCCGGTGATT----AT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7604487 18 +   7812017 GAA-A-ATTCCGGTGATT----AT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10328 18 -     72585 GAA-A-ATTCCGGTGATT----AT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5382 18 +     55207 GAA-A-ATTGAAATGGTT----CA
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        367075 18 -   3329780 GAA-A-ATTGAGATGGTT----CA
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             2043 18 -     11128 GAA-A-ATTCCGGTGATT----AT
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91231398 18 - 195417433 GAA-A-ATTCCGGTGATT----AT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7667047 18 +   7961872 GAA-A-ATTCCGGTGATT----AT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84914 18 -     96226 GAA-A-ATTGAAATGATT----CA
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 4 I 4
s Saiga_tatarica.SaiTat_scaffold_373180                       4003 18 +      4321 GAA-A-ATTGAAATGGTT----CA
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151599 18 -    313613 AAA-C-ATTTCACTGATT----TG
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 19
s Semnopithecus_entellus.k141_11662                          14871 18 -     19888 GAA-A-ATTCCGGTGATT----AT
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      22073 18 +     39453 GAA-A-ATTCCGGTGATT----AT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2599 18 +     27826 GAA-A-ATTCCGGTGATT----AT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             2120 18 -     19483 GAA-A-ATTCCGGTGATT----AT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      2182 18 +      7198 GAA-A-ATTCCGGTGATT----AT
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         10442 18 +     15514 GAA-A-ATTCCGGTGATT----AT
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187919 18 -    191337 GAA-A-TTTTAGATGATT----CA
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13647463 18 -  18376816 GAA-A-TCTTAGATGATT----CA
i Sorex_araneus.JH798187.1                               C 0 I 23
s Spermophilus_dauricus.KZ294078.1                         1948469 18 -   3870691 AAT-A-ATTGAGGTGTTT----TA
i Spermophilus_dauricus.KZ294078.1                       C 0 I 8
s Spilogale_gracilis.SpiGra_flattened_line_13525             27464 18 +     97271 GAA-A-ACTGAGATGGCT----CA
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14455 18 -    196729 GAA-A-ATTGAGATGGTT----CA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   62882711 10 -  69701581 GAA-A-ATTGAG------------
i Sus_scrofa.CM000828.4                                  C 0 I 1
s Symphalangus_syndactylus.tarseq_199                      1088628 18 -   1523678 GAA-A-ATTCAGGTGATT----AT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 7066 18 +     41958 GAA-A-ATTTAGAGGGTT----CA
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69721 16 +    116680 --T-A-AGTGAAATGATT----CA
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115456 18 -    156842 GAA-T-ATTTAGATGATC----CA
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383911 18 +    539355 GAA-T-ATTTAGATGATC----CA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10906 18 +     70052 GAA-A-ATTTAGGTGATC----CC
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               15211 18 +     25099 GAA-A-ATTTAGGTGATC----CC
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186423445 18 + 186847797 GAA-A-ATTCAGGTGATT----AT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103696 18 +    114563 GAA-A-ATTAAAATGATT----TA
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 8
s Tolypeutes_matacus.TolMat_scaffold_228639                   2096 18 +      8208 GAA-A-ACTGAGATGATT----CA
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     79219 18 +    610378 GAA-A-ATTTAGATGGTT----CA
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 7
s Trachypithecus_auratus.k141_722599                          6173 18 -     20410 GAA-A-ATTCCGGTGATT----AT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    10369 18 +     15221 GAA-A-ATTCCGGTGATT----AT
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        6274 18 +     19930 GAA-A-ATTCCGGTGATT----AT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2704 18 -     19997 GAA-A-ATTCCGGTGATT----AT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42823 18 -     60166 GAA-A-ATTCCGGTGATT----AT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        10296 18 -     27529 GAA-A-ATTCCGGTGATT----AT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     10236 18 -     18194 GAA-A-ATTCCGGTGATT----AT
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3971 18 -     21137 GAA-A-ATTCCGGTGATT----AT
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2674 18 -     10723 GAA-A-ATTCCGGTGATT----AT
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1826 18 +      9834 GAA-A-ATTCCGGTGATT----AT
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        20144 18 +     32220 GAA-A-ATTCCGGTGATT----AT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5934241 18 +   6242583 GAA-A-ATTCCGGTGATT----AT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        3488 18 +     20839 GAA-A-ATTCCGGTGATT----AT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                   1049 18 -      1748 GAA-A-ATTGAAACAATT----CA
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 C 0
s Tupaia_chinensis.KB320699.1                              2150655 18 +   4065304 GAA-A-CTTGAGATGATT----CA
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     3953 18 -     10553 GAA-A-CTTGAGACGATT----CA
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15737979 18 +  33153633 CGA-A-ATTGCAGTGGTT----CA
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_97021                    2163 18 -      4736 AAA-C-ATTTAAGTGATT----CA
i Uropsilus_gracilis.UroGra_scaffold_97021               C 0 I 48
s Ursus_maritimus.KK499267.1                               4847169 18 -   5085361 GAA-A-ATTGAGATGGCT----CA
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   7293 18 +     50397 AAA-A-ATTGAGGGGATT----CA
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              7341 18 +     24756 AAA-A-ATTGAGGGGATT----CA
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368660 18 -   5488506 GAA-A-ACTGAGATTGTT----CA
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7630 17 -     43706 -AA-A-ATTGAGATGTTT----CA
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        19970 18 -     24430 GAA-A-ACTAAGGTGTTT----TA
i Xerus_inauris.XerIna_scaffold_48378                    C 0 I 8
s Zalophus_californianus.ZalCal_flattened_line_63728          2090 18 +      2932 GAA-A-ATTGAGATGGCT----CA
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      10240 18 +     63895 GAA-A-ATGGAGATGATT----CA
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11671 18 +     12536 GAA-A-ATTGCAATGGTT----CA
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lepilemur_septentrionalis.k141_185316                      22934  4 +     54090 I
e Lepilemur_ruficaudatus.k141_582783                           754 56 -      1589 I
e Lepilemur_dorsalis.k141_577674                             24879  4 +     45836 I
e Lepilemur_ankaranensis.k141_596936                          6932  4 -     23766 I
e Galagoides_demidoff.k141_31856                              3217  0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1886 60 +     62944 C-TG----------------AATCAAAACA---CA-TA--TA--T--C-TTACCTA----------------AA-TTATCA----G-----AACAAGGCTATTAAACATTTTGC
s Acinonyx_jubatus.LLWD01001279.1                           823528 35 -   1699592 GATG----------------GA------AG---CA-GA--TA--T--T-TTGCCTT----------------AA-TTATCT----G-----A--------------------TT
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 19
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507249 35 -  29979442 TATG----------------GA------AG---CA-GA--TA--T--T-TTGCCTA----------------AA-TTATCT----G-----A--------------------GT
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 19
s Ailurus_fulgens.LNAC01001112.1                             75848 35 -    347723 TATG----------------GA------AA---CA-GA--TA--T--T-TTGCCTG----------------AA-TTATCT----G-----A--------------------AT
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 19
s Allactaga_bullata.AllBul_scaffold_9566                     65237 24 -     89534 GATGAAAACAGGTATTAACTGA------AC------------------------------------------------------------------------------------
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 25
s Allenopithecus_nigroviridis.k141_3361533                    9886 40 -     52922 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9817 40 -     28001 C-TG----------------AGTCAAAAAG---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                           263 40 -     18505 C-TG----------------AGTCAAAAAG---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           1112 40 -     12518 C-TG----------------AGTCAAAAAG---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675629 35 -   2318259 GATG----------------GA------AA---CA-GA--TA--T--T-TTGCTTA----------------AA-TTATCT----G-----G--------------------GA
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 17
s Anoura_caudifer.AnoCau_scaffold_1412                      183382 11 +    412891 -------------------------------------------------------------------------A-TTATCT----G-----A--------------------AC
i Anoura_caudifer.AnoCau_scaffold_1412                   I 7 I 19
s Antilocapra_americana.AntAmePen_scaffold_12469             98110 35 -    100397 GATG----------------GA------AA---CA-GA--TA--T--T-TTGCTTA----------------AA-TTGTCT----G-----G--------------------AA
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 I 18
s Aplodontia_rufa.AprRuf_scaffold_68852                       7535 29 +     20879 ------------------------------------AAGAAA--TTTT-TTGCCTA----------------AA-TTATCT----A-----A--------------------AC
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 8 I 19
s Arctocebus_calabarensis.k141_288239                        14688 35 +     17124 GATG----------------AA------CA---CT-GG--TA--T--T-TTGCCTA----------------AA-ACATCT----G-----G--------------------AG
i Arctocebus_calabarensis.k141_288239                    C 0 I 19
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2739 11 +     43469 -------------------------------------------------------------------------A-TTATCT----G-----A--------------------AC
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 7 I 19
s Avahi_laniger.k141_765380                                  49565 35 -     92717 GATG----------------AA------AA---CT-GG--TA--T--T-TTGCCTA----------------AA-TTATCT----G-----A--------------------AG
i Avahi_laniger.k141_765380                              C 0 I 19
s Avahi_peyrierasi.k141_1424874                              50190 35 +     85213 GATG----------------AA------AA---CT-GG--TA--T--T-TTGCCTA----------------AA-TTATCT----G-----A--------------------AG
i Avahi_peyrierasi.k141_1424874                          C 0 I 19
s Balaenoptera_acutorostrata.KI537508.1                   15191854 35 +  23207421 GATG----------------GA------AC---CA-Ga--ta--t--t-ttgctta----------------aa-ttatct----g-----a--------------------aa
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 19
s Balaenoptera_bonaerensis.DF707048.1                         2319 35 -     18090 GATG----------------GA------AC---CA-Ga--ta--t--t-ttgctta----------------aa-ttatct----g-----a--------------------aa
i Balaenoptera_bonaerensis.DF707048.1                    C 0 I 19
s Beatragus_hunteri.BeaHun_scaffold_50177                    26551 35 +     34529 GATG----------------GA------AA---CA-GA--TA--T--T-TTGCTTA----------------AA-TTATCT----G-----G--------------------AA
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 17
s Bison_bison.KN261452.1                                    199608 35 -    288883 GATG----------------GA------AA---CA-GA--TA--T--T-TTGCTTA----------------AA-TTATCT----G-----G--------------------AA
i Bison_bison.KN261452.1                                 C 0 I 17
s Bos_indicus.CM003047.1                                  20272813 35 +  48749331 GATG----------------GA------AA---CA-GA--TA--T--T-TTGCTTA----------------AA-TTATCT----G-----G--------------------AA
i Bos_indicus.CM003047.1                                 C 0 I 17
s Bos_mutus.JH880303.1                                     1125369 35 -   1948126 GATG----------------GA------AA---CA-GA--TA--T--T-TTGCTTA----------------AA-TTATCT----G-----G--------------------AA
i Bos_mutus.JH880303.1                                   C 0 I 17
s Bos_taurus.CM000203.6                                   18083451 35 +  45695690 GATG----------------GA------AA---CA-GA--TA--T--T-TTGCTTA----------------AA-TTATCT----G-----G--------------------AA
i Bos_taurus.CM000203.6                                  C 0 I 17
s Bubalus_bubalis.KI419123.1                               2819118 35 +   4408762 GATG----------------GA------AA---CA-GA--TA--T--T-TTGCTTA----------------AA-TTATCT----G-----G--------------------GA
i Bubalus_bubalis.KI419123.1                             C 0 I 17
s Camelus_bactrianus.KN276810.1                            9999187 35 -  17673402 GATG----------------GA------AA---CA-TA--TA--C--T-TTGCTTA----------------AC-TTATCT----G-----A--------------------AC
i Camelus_bactrianus.KN276810.1                          C 0 I 19
s Camelus_dromedarius.KN272107.1                           2331651 35 -   7040546 GATG----------------GA------AA---CA-TA--TA--C--T-TTGCTTA----------------AC-TTATCT----G-----A--------------------AC
i Camelus_dromedarius.KN272107.1                         C 0 I 19
s Camelus_ferus.KB017975.1                                  399927 35 -   1652518 GATG----------------GA------AA---CA-TA--TA--C--T-TTGCTTA----------------AC-TTATCT----G-----A--------------------AC
i Camelus_ferus.KB017975.1                               C 0 I 19
s CanFam4.chr16                                           17796024 32 -  60362399 GATG----------------GA------AG---CA-GA--TA--T--T-TTGCCTA----------------AA-TTATCT----G----------------------------
i CanFam4.chr16                                          C 0 I 18
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182081 32 -    185531 GATG----------------GA------AG---CA-GA--TA--T--T-TTGCCTA----------------AA-TTATCT----G----------------------------
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 I 18
s Canis_lupus_dingo.QKWQ01000480.1                         9031467 32 -   9314153 GATG----------------GA------AG---CA-GA--TA--T--T-TTGCCTA----------------AA-TTATCT----G----------------------------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 18
s Canis_lupus_familiaris.chr16                            17955732 32 -  59632846 GATG----------------GA------AG---CA-GA--TA--T--T-TTGCCTA----------------AA-TTATCT----G----------------------------
i Canis_lupus_familiaris.chr16                           C 0 I 18
s Canis_lupus_orion.HG994398.1                            18497032 32 +  63665305 GATG----------------GA------AG---CA-GA--TA--T--T-TTGCCTA----------------AA-TTATCT----G----------------------------
i Canis_lupus_orion.HG994398.1                           C 0 I 18
s Capra_aegagrus.CM003241.1                               18829747 35 +  46296322 GATG----------------GA------AA---CA-GA--TA--T--T-TTGCTTA----------------AA-TTATCT----G-----G--------------------GA
i Capra_aegagrus.CM003241.1                              C 0 I 17
s Capra_hircus.CM004588.1                                 18060467 35 -  44709034 GATG----------------GA------AA---CA-GA--TA--T--T-TTGCTTA----------------AA-TTATCT----G-----G--------------------GA
i Capra_hircus.CM004588.1                                C 0 I 17
s Carlito_syrichta.NW_007259797.1                           141310 35 -    496798 AATG----------------AA------AA---CA-GA--TA--T--T-TTCCCTA----------------AA-TTATCT----A-----A--------------------GC
i Carlito_syrichta.NW_007259797.1                        C 0 I 18
s Carollia_perspicillata.CarPer_scaffold_92756                3156 11 -     11696 -------------------------------------------------------------------------G-TTATCT----G-----A--------------------AC
i Carollia_perspicillata.CarPer_scaffold_92756           I 7 I 19
s Castor_canadensis.CasCan_scaffold_2074                    133912 27 +    179628 ------------------------------------CA--TATAC--T-TTACCTA----------------AA-TTATCT----A-----A--------------------AC
i Castor_canadensis.CasCan_scaffold_2074                 I 7 I 19
s Catagonus_wagneri.CatWag_scaffold_2839                     89505 37 +    217609 --TG----------------GA------AA---GA-GA--TG--T--T-TTGCTTA----------------AA--TATTT----GACCTGA--------------------CC
i Catagonus_wagneri.CatWag_scaffold_2839                 I 1 I 19
s Cavia_aperea.AVPZ01000300.1                             18347916 26 -  23392119 ------------------------------------CA--TA--T--T-TTGCCAA----------------AAATC----GTCTA-----A--------------------GC
i Cavia_aperea.AVPZ01000300.1                            I 8 I 30
s Cavia_porcellus.DS562891.1                              18360176 26 -  23407841 ------------------------------------CA--TA--T--T-TTGCCAA----------------AAATC----GTCTA-----A--------------------GC
i Cavia_porcellus.DS562891.1                             I 8 I 30
s Cavia_tschudii.CavTsc_scaffold_8919                        99050 26 +    143979 ------------------------------------CA--TA--T--T-TTGCCAA----------------AAATC----GTCTA-----A--------------------GC
i Cavia_tschudii.CavTsc_scaffold_8919                    I 8 I 30
s Cephalopachus_bancanus.k141_2037105                         5225 35 -      8605 AATG----------------AA------AA---CA-GA--TA--T--T-TTCCCTA----------------AA-TTATCT----A-----A--------------------GC
i Cephalopachus_bancanus.k141_2037105                    C 0 I 18
s Ceratotherium_simum.JH767749.1                          12228145 35 +  27778364 GATG----------------GA------AA---CG-GA--TA--T--T-TTGCCTA----------------AG-TTATCT----G-----A--------------------AC
i Ceratotherium_simum.JH767749.1                         C 0 I 19
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2863 35 -      3715 GATG----------------GA------AA---CG-GA--TA--T--T-TTGCCTA----------------AG-TTATCT----G-----A--------------------AC
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 I 19
s Cercocebus_atys.KQ010504.1                               4470846 40 +   4669795 C-TG----------------AGTcaaaaaa---ca-ga--ta--t--t-ttacCTA----------------AG-TTATCA----G-----A--------------------GC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         9395 40 -     19203 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3816 40 +      8260 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           4044 40 +     27781 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         4202 40 -     20310 C-TG----------------AGTCAAAAAA---CA-GG--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           7186 40 +     29689 C-TG----------------AGTCAAAAAA---CA-GG--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            1624 40 +      9989 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9870 40 -     27936 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9896 40 -     11289 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38812268 40 +  39242232 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21217967 40 -  21565898 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCG----G-----A--------------------GC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       35086 40 -     53127 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        2371 40 +      7159 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9889 40 -     27947 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9865 40 +     17596 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         40365 40 -     41420 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            5053 15 -      6351 GATG----------------GA------AA---CA-GA--TA--T---------------------------------------------------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 I 27
s Cheirogaleus_major.k141_333249                             16981 35 -     52598 GATG----------------AA------AA---CT-GG--TA--T--T-TTGCCTA----------------AA-TTATCT----G-----G--------------------AG
i Cheirogaleus_major.k141_333249                         C 0 I 19
s Cheirogaleus_medius.k141_1055463                           12331 35 +     57038 GATG----------------AA------AA---CT-GG--TA--T--T-TTGCCTA----------------AA-TTATCT----G-----G--------------------AG
i Cheirogaleus_medius.k141_1055463                       C 0 I 19
s Chinchilla_lanigera.JH722012.1                           1251257 25 +   2543920 ------------------------------------CA--TA--T--T-TTTCCTA----------------AG-TT----ATCTA-----A--------------------GC
i Chinchilla_lanigera.JH722012.1                         I 8 I 28
s Chlorocebus_aethiops.ctg25                              18423828 40 -  18827391 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       10269 40 -     50209 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135417277 40 + 135778131 C-TG----------------AGTCAAAAAG---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15434 10 +     19366 GATG----------------GA------AA---CA-------------------------------------------------------------------------------
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 I 30
s Choloepus_hoffmanni.KN194906.1                            170533 10 +    839153 GATG----------------GA------AA---CA-------------------------------------------------------------------------------
i Choloepus_hoffmanni.KN194906.1                         C 0 I 30
s Colobus_angolensis.KN981557.1                            1905803 40 +   2368649 C-TG----------------AGTCAAAAAC---CA-GA--TA--T--T-TTACCTG----------------AG-TTATCA----G-----A--------------------GC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199945473 40 + 200372422 C-TG----------------AGTCAAAAAC---CA-GA--TA--T--T-TTACCTG----------------AG-TTATCA----G-----A--------------------GC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              32344 40 +     84244 C-TG----------------AGTCAAAAAC---CA-GA--TA--T--T-TTACCTG----------------AG-TTATCA----G-----A--------------------GC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17546579 15 -  53390261 -----------------------------------------------------CAA----------------AA-TTCTCA----A-----A--------------------CC
i Condylura_cristata.JH655891.1                          I 20 I 17
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10772 35 -     20389 AATG-------------------------AAAAGA-GA--TA--T--T-TTGGCTA----------------GA-TTATCT----G-----A--------------------AC
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 19
s Crocidura_indochinensis.CroInd_scaffold_603213              1507 31 +      1923 -----------------------------------------------------ctacataagatacaccataaa-acatca----t-----a--------------------gc
i Crocidura_indochinensis.CroInd_scaffold_603213         I 18 n 18
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24477 35 -     87169 GATG----------------GA------AA---CA-GC--TA--T--T-TTGCCTT----------------AA-TTATCT----G-----A--------------------GT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 19
s Cuniculus_paca.CunPac_flattened_line_231100                 3332 25 +      5455 ------------------------------------CA--TA--T--T-TTGCCTA----------------AA-TC----ATCTA-----A--------------------GA
i Cuniculus_paca.CunPac_flattened_line_231100            I 8 I 25
s Dasyprocta_punctata.DasPun_flattened_line_102822            8505 25 +     10433 ------------------------------------CA--TA--T--T-TTGCCTA----------------CA-TT----ACCTA-----A--------------------GC
i Dasyprocta_punctata.DasPun_flattened_line_102822       I 324 n 59
s Dasypus_novemcinctus.JH564415.1                            61323 15 +   2246927 GATG----------------GA------AA---CA-GA--TA--T---------------------------------------------------------------------
i Dasypus_novemcinctus.JH564415.1                        C 0 I 27
s Daubentonia_madagascariensis.ctg71                      12533152 35 -  12879189 GATG----------------AA------AA---CG-GG--TA--T--T-TTGCCTA----------------AA-TTATCT----G-----A--------------------AG
i Daubentonia_madagascariensis.ctg71                     C 0 I 19
s Delphinapterus_leucas.KZ290073.1                        16811489 35 +  35494412 GATG----------------GA------AA---CA-GG--TA--T--T-TTGctta----------------aa-ttatct----g-----a--------------------aa
i Delphinapterus_leucas.KZ290073.1                       C 0 I 19
s Desmodus_rotundus.KZ672289.1                             8628188 11 +  20541912 -------------------------------------------------------------------------A-TTATCT----G-----A--------------------AC
i Desmodus_rotundus.KZ672289.1                           I 7 I 19
s Dicerorhinus_sumatrensis.PEKH010002091.1                  669995 35 +   1390856 GATG----------------GA------AA---CG-GA--TA--T--T-TTGTCTA----------------AG-TTATCT----G-----A--------------------AC
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 19
s Diceros_bicornis.DicBicMic_scaffold_5955                    2753 35 +    198055 gatg----------------ga------aa---tg-ga--ta--t--t-ttgccta----------------ag-ttatct----g-----a--------------------ac
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 19
s Dinomys_branickii.DinBra_scaffold_21862                    34742 25 +     67921 ------------------------------------CA--TG--T--T-TTCCCTA----------------AA-TT----ATCTA-----A--------------------GC
i Dinomys_branickii.DinBra_scaffold_21862                I 8 I 28
s Dipodomys_ordii.KN672350.1                              18896068 27 +  37912305 ------------------------------------ta--tatat--t-ttattta----------------aa-ttatct----g-----A--------------------AC
i Dipodomys_ordii.KN672350.1                             I 8 I 16
s Dipodomys_stephensi.DipSte_scaffold_75855                  12286 27 +     14536 ------------------------------------TA--TATAT--T-TTATTTA----------------AG-TTATCT----G-----A--------------------AC
i Dipodomys_stephensi.DipSte_scaffold_75855              I 8 I 16
s Dolichotis_patagonum.DolPat_scaffold_30833                 31928 26 -     42551 ------------------------------------CA--TA--T--T-TTGCCAA----------------AAATC----ATCTA-----A--------------------GC
i Dolichotis_patagonum.DolPat_scaffold_30833             I 8 I 28
s Eidolon_helvum.KE759718.1                                   7683 27 +     11740 ---------------------------------TA-GA--TA--T--T-TTAGCTA----------------AA-TTATCT----G-----A--------------------AC
i Eidolon_helvum.KE759718.1                              I 4 I 21
s Elaphurus_davidianus.JRFZ01104969.1                       310781 35 +    607251 GATG----------------GA------AA---CA-GA--TA--T--T-TTGCTTA----------------AA-TTATCT----G-----G--------------------AA
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 18
s Enhydra_lutris.KZ291758.1                               16326035 35 -  41312741 TACG----------------GA------AG---CA-GA--TA--T--T-TTGCCTA----------------AA-TTATCT----C-----A--------------------AT
i Enhydra_lutris.KZ291758.1                              C 0 I 19
s Eptesicus_fuscus.JH977646.1                              2144320 35 -  14770903 AATG----------------GA------AA---CA-GA--TA--T--T-TTGCCTA----------------AA-TTATCT----G-----A--------------------AC
i Eptesicus_fuscus.JH977646.1                            C 0 I 18
s Equus_asinus.JREZ01000139.1                              1280032 35 +   4378816 GATG----------------GA------AA---CA-GA--TA--T--T-TTGCCTA----------------AA-TTATCT----G-----A--------------------AC
i Equus_asinus.JREZ01000139.1                            C 0 I 19
s Equus_caballus.CM000403.2                               18527853 35 -  39960074 GATG----------------GA------AA---CA-GA--TA--T--T-TTGTCTA----------------AA-TTATCT----G-----A--------------------AC
i Equus_caballus.CM000403.2                              C 0 I 19
s Equus_przewalskii.KK951119.1                               29868 35 +    498745 GATG----------------GA------AA---CA-GA--TA--T--T-TTGTCTA----------------AA-TTATCT----G-----A--------------------AC
i Equus_przewalskii.KK951119.1                           C 0 I 19
s Erinaceus_europaeus.JH835339.1                           3325588 15 -   7059049 -----------------------------------------------------CTG----------------AA-TTAAAA----G-----G--------------------AC
i Erinaceus_europaeus.JH835339.1                         I 19 I 18
s Erythrocebus_patas.Contig38                             21200459 40 -  21539334 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACGTA----------------AG-TTATCA----G-----A--------------------GC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11165 35 +    133382 GATG----------------GA------AA---CA-GA--TA--T--T-TTGCTTA----------------AA-TTATCT----G-----A--------------------AA
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 19
s Eubalaena_japonica.EubJap_flattened_line_31514             25102 35 -     44125 GATG----------------GA------AA---CA-GA--TA--T--T-TTGCTTA----------------AA-TTATCT----G-----A--------------------AA
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 I 19
s Eulemur_albifrons.k141_342033                               9661 35 -     14127 GTTG----------------AA------AA---CT-GG--TA--T--T-TTGCCTA----------------AA-TTATCT----G-----C--------------------AA
i Eulemur_albifrons.k141_342033                          C 0 I 19
s Eulemur_collaris.k141_377015                                2359 35 -     16928 GTTG----------------AA------AA---CT-GG--TA--T--T-TTGCCTA----------------AA-TTATCT----G-----C--------------------AA
i Eulemur_collaris.k141_377015                           C 0 I 19
s Eulemur_coronatus.k141_885031                              11392 35 -     25546 GTTG----------------AA------AA---CT-GG--TA--T--T-TTGCCTA----------------AA-TTATCT----G-----C--------------------AG
i Eulemur_coronatus.k141_885031                          C 0 I 19
s Eulemur_flavifrons.k141_1184614                             8577 35 +     26330 GTTG----------------AA------AA---CT-GG--TA--T--T-TTGCCTA----------------AA-TTATCT----G-----A--------------------AG
i Eulemur_flavifrons.k141_1184614                        C 0 I 19
s Eulemur_fulvus.k141_544389                                  9834 35 +     23973 GTTG----------------AA------AA---CT-GG--TA--T--T-TTGCCTA----------------AA-TTATCT----G-----C--------------------AA
i Eulemur_fulvus.k141_544389                             C 0 I 19
s Eulemur_macaco.k141_1562045                                 8577 35 +     75513 GTTG----------------AA------AA---CT-GG--TA--T--T-TTGCCTA----------------AA-TTATCT----G-----A--------------------AG
i Eulemur_macaco.k141_1562045                            C 0 I 19
s Eulemur_mongoz.k141_232305                                  6529 35 +     97555 GTTG----------------AA------AA---CT-GG--TA--T--T-TTGCCTA----------------AA-TTATCT----G-----C--------------------AG
i Eulemur_mongoz.k141_232305                             C 0 I 19
s Eulemur_rubriventer.k141_571033                             9455 35 +     26496 GTTG----------------AA------AA---CT-GG--TA--T--T-TTGCCTA----------------AA-TTATCT----G-----A--------------------AG
i Eulemur_rubriventer.k141_571033                        C 0 I 19
s Eulemur_rufus.k141_754848                                  18746 35 +     18826 GTTG----------------AA------AA---CT-GG--TA--T--T-TTGCCTA----------------AA-TTATCT----G-----C--------------------AA
i Eulemur_rufus.k141_754848                              C 0 I 19
s Eulemur_sanfordi.k141_1122526                               9640 35 +    111500 GTTG----------------AA------AA---CT-GG--TA--T--T-TTGCCTA----------------AA-TTATCT----G-----C--------------------AG
i Eulemur_sanfordi.k141_1122526                          C 0 I 19
s Felis_catus.CM001381.2                                  20233398 35 + 206538554 GATG----------------GA------AG---CA-GA--TA--T--T-TTGCCTT----------------AA-TTATCT----G-----A--------------------TT
i Felis_catus.CM001381.2                                 C 0 I 19
s Felis_catus_fca126.CM031415.1                           20192228 35 + 205367284 GATG----------------GA------AG---CA-GA--TA--T--T-TTGCCTT----------------AA-TTATCT----G-----A--------------------TT
i Felis_catus_fca126.CM031415.1                          C 0 I 19
s Felis_nigripes.FelNig_flattened_line_20823                  5753 35 -     36744 GATG----------------GA------AG---CA-GA--TA--T--T-TTGCCTT----------------AA-TTATCT----G-----A--------------------TT
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 19
s Galeopterus_variegatus.GalVar_scaffold_56069               25717 35 +     26054 CATG----------------GA------AA---CA-GA--TA--T--T-TTGCCTT----------------AA-TTACCT----G-----A--------------------AC
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 I 19
s Giraffa_tippelskirchi.LVKQ01S007888.1                     608747 35 -    660261 GATG----------------GA------AA---CA-GA--TA--T--T-TTGCTTA----------------AA-TTATCT----G-----G--------------------AA
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 I 17
s Glis_glis.GliGli_scaffold_19807                            30615 27 +     49224 ------------------------------------GAGCTC--T--T-TGGCCTA----------------AA-TTATCT----G-----A--------------------AC
i Glis_glis.GliGli_scaffold_19807                        I 8 I 19
s Gorilla_beringei.k141_2022027                               2541 60 +      3305 C-TG----------------AATCAAAACA---CA-TA--TA--T--T-TTACCTA----------------AA-TTATCA----G-----AACAAGGCTCTTAAACATTTTGC
i Gorilla_beringei.k141_2022027                          I 194 I 1
s Gorilla_gorilla.CYUI03001814.1                             27633 60 -     31004 C-TG----------------AATCAAAACA---CA-TA--TA--T--T-TTACCTA----------------AA-TTATCA----G-----AACAAGGCTCTTAAACATTTTGC
i Gorilla_gorilla.CYUI03001814.1                         I 1068 I 206
s Graphiurus_murinus.GraMur_scaffold_10447                   30339 27 +     78134 ------------------------------------GAGCTA--T--T-TGGTCTA----------------AA-TTATCT----G-----A--------------------AC
i Graphiurus_murinus.GraMur_scaffold_10447               I 8 I 19
s Hapalemur_alaotrensis.k141_170648                           2726 35 -     19426 GATG----------------AA------AA---CT-GG--TA--T--T-TTGCCTA----------------AA-TTATCT----G-----A--------------------AT
i Hapalemur_alaotrensis.k141_170648                      C 0 I 19
s Hapalemur_gilberti.k141_488810                              7870 35 -     15286 GATG----------------AA------AA---CT-GG--TA--T--T-TTGCCTA----------------AA-TTATCT----G-----A--------------------AT
i Hapalemur_gilberti.k141_488810                         C 0 I 19
s Hapalemur_griseus.k141_1511508                              9508 35 +     18253 GATG----------------AA------AA---CT-GG--TA--T--T-TTGCCTA----------------AA-TTATCT----G-----A--------------------AT
i Hapalemur_griseus.k141_1511508                         C 0 I 19
s Hapalemur_meridionalis.k141_248335                          9611 35 -     41752 GATG----------------AA------AA---CT-GG--TA--T--T-TTGCCTA----------------AA-TTATCT----G-----A--------------------AT
i Hapalemur_meridionalis.k141_248335                     C 0 I 19
s Hapalemur_occidentalis.k141_907772                          9444 35 -     16460 GATG----------------AA------AA---CT-GG--TA--T--T-TTGCCTA----------------AA-TTATCT----G-----A--------------------AT
i Hapalemur_occidentalis.k141_907772                     C 0 I 19
s Helogale_parvula.HelPar_flattened_line_2585               238391 35 +    327341 GATG----------------CA------AA---CA-AA--TA--T--T-TTGCCTT----------------AA-TTATCT----G-----A--------------------AT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 19
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 17951 35 +     36099 GATG----------------GA------AA---CA-GA--TA--T--T-TTGCTTA----------------AA-TTATCT----G-----G--------------------GA
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 I 17
s Heterocephalus_glaber.JH602082.1                        20659836 21 +  22651954 ------------------------------------ca--ta--t--t-tttccta----------------aa-tt--------a-----a--------------------GC
i Heterocephalus_glaber.JH602082.1                       I 7 I 22
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112302 35 +    128679 AATG----------------GA------AA---CA-GA--TA--T--C-TTGCTTA----------------AA-TTACCT----G-----A--------------------AA
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 I 19
s Hipposideros_armiger.JXIK01000431.1                       108546 35 +   1711038 AATG-------------------------GAAACA-GA--TA--T--T-TTGGCTA----------------AA-TTATCC----G-----A--------------------AC
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 19
s Hipposideros_galeritus.HipGal_scaffold_29171               39987 35 +     43066 AATG-------------------------GAAACA-GA--TA--T--T-TTGGCTA----------------AA-TTATCT----G-----A--------------------AC
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 I 19
s Hoolock_leuconedys.ctg274                                    430016 60 +    630532 C-TG----------------AATCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AA-TTATCA----G-----AACAAGGCTCTTCAACAGTTTGC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40867 35 +     55795 GATG----------------GA------AG---CA-GA--TA--T--T-TTGCCAT----------------AA-TTATCT----G-----A--------------------AT
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 18
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20305 25 -    143317 ------------------------------------TG--TA--T--T-TTGCCAA-----------------AATC----ATCTA-----A--------------------GC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 8 I 28
s Hylobates_agilis.k141_307679                               12947 60 -     15490 C-TG----------------AATCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AA-TTATCA----G-----AACAAGGCTCTTAAACATTTTGC
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              54952 60 +     67168 C-TG----------------AATCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AA-TTATCA----G-----AACAAGGCTCTTAAACATTTTGC
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189538602 60 - 191637585 C-TG----------------AATCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AA-TTATCA----G-----AACAAGGCTCTTAAACATTTTGC
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3331495 60 -  11177569 C-TG----------------AATCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AA-TTATCA----G-----AACAAGGCTCTTAAACATTTTGC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      81401 25 +    135385 ------------------------------------CA--TA--T--T-TTGCTTA----------------AA-TTATCT----A-----A--------------------CC
i Hystrix_cristata.HysCri_scaffold_5660                  I 8 I 23
s Ictidomys_tridecemlineatus.JH393364.1                    7514857 27 -   7955117 ------------------------------------GAG-TA--TT-T-TTGCCTA----------------AA-TTATCT----A-----A--------------------AC
i Ictidomys_tridecemlineatus.JH393364.1                  I 8 I 19
s Indri_indri.k141_3655594                                   18427 35 +     31101 GATG----------------AA------AG---CT-GG--CA--T--T-TTGGCTA----------------AA-TTATCT----G-----A--------------------AG
i Indri_indri.k141_3655594                               C 0 I 19
s Inia_geoffrensis.IniGeo_flattened_line_48101               22706 35 +     23964 GATG----------------GA------AA---CA-GA--TA--C--T-TTGCTTA----------------AA-TTATCT----G-----A--------------------AA
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 I 19
s Jaculus_jaculus.JH725527.1                               8271651  7 -   9596543 ------------------------------------AA--AG--T--C-T----------------------------------------------------------------
i Jaculus_jaculus.JH725527.1                             I 20 I 18
s Kogia_breviceps.KogBre_flattened_line_192630                2068 35 -      3359 GACG----------------GA------AA---CA-GA--TA--T--T-TTGCTTA----------------AA-TTTTCT----G-----A--------------------AA
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 I 19
s Lasiurus_borealis.LasBor_scaffold_32767                    12741 35 -     42476 AATG----------------GA------AA---CA-GA--TA--T--T-CTGCCTA----------------AA-TTATCT----G-----A--------------------AC
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 18
s Lemur_catta.scaffold_24                                 15519970 35 -  30322482 GATG----------------AA------AA---CT-GG--TA--T--T-TTGCCTA----------------AA-TTATCT----G-----A--------------------AT
i Lemur_catta.scaffold_24                                C 0 I 19
s Leptonychotes_weddellii.KB714746.1                       3036369 35 +   3914936 CATG----------------GA------AG---CA-GA--TA--T--T-TTGCCTA----------------AA-TGATCT----G-----A--------------------AT
i Leptonychotes_weddellii.KB714746.1                     C 0 I 19
s Lipotes_vexillifer.KE559953.1                             267758 35 -    662738 GATG----------------GA------AA---CA-ga--ta--t--t-ttgctta----------------aa-ttatcT----G-----A--------------------AT
i Lipotes_vexillifer.KE559953.1                          C 0 I 19
s Lophocebus_aterrimus.ctg367                              1432390 40 +   1826925 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                             949 35 +     11245 AATG----------------AA------CA---CT-GG--TA--T--T-TTACCTA----------------AA-TCATCT----G-----G--------------------AA
i Loris_lydekkerianus.k141_2539221                       C 0 I 19
s Loris_tardigradus.ctg83                                   999786 35 +   6120653 AATG----------------AA------CA---CT-GG--TA--T--T-TTACCTA----------------AA-TCATCT----G-----G--------------------AA
i Loris_tardigradus.ctg83                                C 0 I 19
s Lycaon_pictus.CM007581.1                                17951972 32 -  59628241 GATG----------------GA------AG---CA-GA--TA--T--T-TTGCCTA----------------AA-TTATCT----G----------------------------
i Lycaon_pictus.CM007581.1                               C 0 I 18
s Macaca_arctoides.k141_2326796                               2211 40 +     40492 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59671466 40 +  60120075 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  7966 40 -     26193 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75763 40 -    114318 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  1478 40 -     23192 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10931 40 -     29190 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  19498 40 +     37952 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834586 40 + 187317192 C-TG----------------AGtcaaaaaa---ca-ga--ta--t--t-ttaccTA----------------AG-TTATCA----G-----A--------------------GC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25453149 40 -  25927173 C-TG----------------AGtcaaaaaa---ca-ga--ta--t--t-ttaccTA----------------AG-TTATCA----G-----A--------------------GC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  75347 40 +     89720 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 2345 40 +     20474 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   2146 40 -     14993 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  325018 40 -    668171 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                  449 40 -     24072 C-TG----------------ACTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               21085 40 -     45290 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87789 27 +     94391 ---------------------------------CA-GA--TA--T--T-TCGGCTA----------------AA-TTATCT----G-----A--------------------AC
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 4 I 21
s Mandrillus_leucophaeus.scaffold280                      23932634 40 -  24302211 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346811 40 +    752769 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15855 35 +    737560 AATG----------------GA------AA---GA-GA--CA--T--T-TTGCCTA----------------AG-TTAACC----G-----A--------------------AC
i Manis_javanica.JSZB01003497.1                          C 0 I 19
s Manis_pentadactyla.KN006162.1                              47244 35 -    317179 AATG----------------GA------AA---GA-GA--CA--T--T-TTGCCTA----------------AG-TTATCT----G-----A--------------------AC
i Manis_pentadactyla.KN006162.1                          C 0 I 19
s Marmota_marmota.CZRN01000018.1                          33097707 27 -  40650429 ------------------------------------GAG-TA--TT-T-TTGCCTA----------------AA-TTATCT----A-----A--------------------AC
i Marmota_marmota.CZRN01000018.1                         I 8 I 19
s Megaderma_lyra.MegLyr_scaffold_4542                         7053 35 -    207569 AATA-------------------------GAAACA-GA--TA--T--T-TTGGCTA----------------AA-TTATCT----G-----A--------------------AC
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 19
s Mellivora_capensis.MelCap_flattened_line_69365              6748 35 +     13704 TATG----------------GA------AG---CA-GA--TA--T--T-TTGCCTA----------------AA-TTATCT----G-----A--------------------AT
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 19
s Mesoplodon_bidens.MesBid_scaffold_108144                    3374 35 +     10310 GATG----------------GA------AA---CA-GA--TA--T--T-TTGCTTA----------------AA-TTATCT----G-----A--------------------AA
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 I 19
s Microcebus_murinus.CM007674.1                           18287366 35 -  93316391 GATG----------------AA------AA---CA-AG--TA--T--T-TTGCCTA----------------AA-TTATCT----T-----A--------------------AA
i Microcebus_murinus.CM007674.1                          C 0 I 19
s Micronycteris_hirsuta.MicHir_scaffold_52381                13699 11 -     19307 -------------------------------------------------------------------------A-TTATCT----G-----A--------------------AC
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 7 I 19
s Miniopterus_natalensis.LDJU01000034.1                    1849367 35 +   8254450 AATG----------------GA------AA---CG-GA--TA--T--T-ATGCCTA----------------TG-TTATCT----G-----A--------------------AC
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 19
s Miniopterus_schreibersii.MinSch_scaffold_18080             33243 35 +     64694 AATG----------------GA------AA---CG-GA--TA--T--T-ATGCCTA----------------AG-TTATCT----G-----A--------------------AC
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 19
s Miopithecus_ogouensis.k141_534055                           4384 40 -     28506 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62699 35 -     63350 CATG----------------GA------AG---CA-GA--TA--T--T-TTGCCTA----------------AA-TGATCT----G-----A--------------------AT
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 I 19
s Mirza_zaza.k141_952172                                      4934 35 -     37649 GATG----------------AA------AA---CC-GG--TA--T--T-TTGCCTA----------------AA-TTATCT----G-----A--------------------AG
i Mirza_zaza.k141_952172                                 C 0 I 19
s Monodon_monoceros.MonMon_M_scaffold_103                    26879 35 -    437263 GATG----------------GA------AA---CA-GG--TA--T--T-TTGCTTA----------------AA-TTATCT----G-----A--------------------AA
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 19
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138103 11 -    366855 -------------------------------------------------------------------------A-TTATCT----G-----A--------------------AC
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 7 I 19
s Moschus_moschiferus.MosMos_scaffold_13123                    832 35 +     82753 GAAG----------------GA------AA---CA-GA--TA--T--T-TTGCTTA----------------AA-TTATCT----G-----G--------------------AA
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 18
s Mungos_mungo.MunMun_flattened_line_23663                   31599 35 +     37127 GATG----------------CA------AA---CA-AA--TA--T--T-TTGCCTT----------------AA-TTATCT----G-----A--------------------AT
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 19
s Murina_feae.MurFea_scaffold_85699                           5391 35 +     14753 AATG----------------GA------AA---CA-GA--TA--T--T-TTGCCTA----------------AA-TTATCC----G-----A--------------------AC
i Murina_feae.MurFea_scaffold_85699                      C 0 I 19
s Muscardinus_avellanarius.MusAve_scaffold_82313              2608 27 +     14296 ------------------------------------GAGCTA--T--T-TGGCCTA----------------AA-TTATCT----G-----A--------------------AC
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 8 I 19
s Mustela_putorius.JH418006.1                               297933 35 -  14710649 GATG----------------GA------AG---CA-GA--TA--T--T-TTGCCTA----------------AA-TTATCT----G-----A--------------------AT
i Mustela_putorius.JH418006.1                            C 0 I 19
s Myotis_brandtii.KE162005.1                                278563 35 -  10118263 AATG----------------GA------AA---CA-GA--TA--T--T-TTGCCTA----------------AA-TTATCT----G-----A--------------------AC
i Myotis_brandtii.KE162005.1                             C 0 I 19
s Myotis_davidii.KB100139.1                                1586118 35 -   6019432 AATG----------------GA------AA---CA-GA--TA--T--T-TTGCCTA----------------AA-TGATCT----G-----A--------------------AC
i Myotis_davidii.KB100139.1                              C 0 I 19
s Myotis_lucifugus.GL429869.1                              3902327 35 -   4330536 AATG----------------GA------AA---CA-GA--TA--T--T-TTGCCTA----------------AA-TTATCT----G-----A--------------------AC
i Myotis_lucifugus.GL429869.1                            C 0 I 19
s Myotis_myotis.MyoMyo_scaffold_28916                        32887 35 +     33610 AATG----------------GA------AA---CA-GA--TA--T--T-TTGCCTA----------------TA-TTATCT----G-----A--------------------AC
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 I 19
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186383 15 +    196477 AATG----------------GA------AA---CA-GA--TA--T---------------------------------------------------------------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 I 27
s Nannospalax_galili.KL204047.1                            2025766 24 -   3037898 ------------------------------------GA--CA--T--T-T-ACCCA----------------AG-TTATCT----G-----A--------------------AC
i Nannospalax_galili.KL204047.1                          I 10 I 26
s Nasalis_larvatus.k141_413338                               10384 40 +     21681 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865835 35 +   7148211 GATG----------------GA------AA---CA-GA--TA--T--T-TTGCtta----------------aa-ttatct----g-----a--------------------aa
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 19
s Noctilio_leporinus.NocLep_scaffold_251                    756661 11 +    783361 -------------------------------------------------------------------------A-TGAGCT----G-----A--------------------AC
i Noctilio_leporinus.NocLep_scaffold_251                 I 7 I 20
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146233 32 -   9404916 GATG----------------GA------AG---CA-GA--TA--T--T-TTGCCTA----------------AA-TTATCT----G----------------------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 18
s Nycticebus_bengalensis.LG01                            102574753 34 - 196305487 GATG----------------AA------CA---CT-GG--TA--T--T-TTACCTA----------------AA-TCATCT----G-----G--------------------A-
i Nycticebus_bengalensis.LG01                            C 0 I 16
s Nycticebus_coucang.k141_5327727                             2439 34 +      8486 GATG----------------AA------CA---CT-GG--TA--T--T-TTACCTA----------------AA-TCATCT----G-----G--------------------A-
i Nycticebus_coucang.k141_5327727                        C 0 I 16
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105745180 34 + 199412804 GATG----------------AA------CA---CT-GG--TA--T--T-TTACCTA----------------AA-TCATCT----G-----G--------------------A-
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 16
s Ochotona_princeps.JH802162.1                             1356025 29 +   3988456 CATG----------------GA------AA---CA-GA--CG--C--T-TGGTCTA----------------AT-TTAA-----------------------------------
i Ochotona_princeps.JH802162.1                           C 0 I 2906
s Odobenus_rosmarus.KB229312.1                              500986 35 -   2017862 TACG----------------TG------AG---CA-GA--CA--T--T-TTGCCTA----------------AA-TTATCT----G-----A--------------------AT
i Odobenus_rosmarus.KB229312.1                           C 0 I 19
s Odocoileus_virginianus.KZ100018.1                         145152 35 +    630418 GGTG----------------GA------AA---CA-GA--TA--T--T-TTGCTTA----------------AA-TTATCT----G-----G--------------------AA
i Odocoileus_virginianus.KZ100018.1                      C 0 I 18
s Okapia_johnstoni.LVCL01S0005463.1                          76663 35 -    150152 GATG----------------GA------AA---CA-GA--TA--T--T-TTGCTTA----------------AA-TTATCT----G-----G--------------------AA
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 18
s Orcinus_orca.KB316932.1                                  2781750 35 -  10937097 GATG----------------GA------AA---CA-ga--ta--t--t-ttgctta----------------aa-ttatct----g-----a--------------------aa
i Orcinus_orca.KB316932.1                                C 0 I 19
s Otocyon_megalotis.JAEUCK010005147.1                       458986 32 -    559221 GATG----------------GA------AG---CA-GA--TA--T--T-TTGCCTA----------------AA-TTATCT----G----------------------------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 18
s Ovis_aries.CM001607.2                                   17585926 35 +  44047080 GATG----------------GA------AA---CA-GA--TA--T--T-TTGCTTA----------------AA-TTATCT----G-----G--------------------GA
i Ovis_aries.CM001607.2                                  C 0 I 17
s Ovis_canadensis.OviCan_scaffold_2572                      173903 35 -    191736 GATG----------------GA------AA---CA-GA--TA--T--T-TTGCTTA----------------AA-TTATCT----G-----G--------------------GA
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 I 17
s Pan_paniscus.KQ411613.1                                    39238 60 +     80009 C-TG----------------AATCAAAACA---CA-TA--TA--T--C-TTACCTA----------------AA-TTATCA----G-----AACAAGGTTATTAAACATTTTGC
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03001836.1                             25155 60 +     51860 C-TG----------------AATCAAAACA---CA-TA--TA--T--C-TTACCTA----------------AA-TTATCA----G-----AACAAGGTTATTAAACATTTTGC
i Pan_troglodytes.NBAG03001836.1                         I 76 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  147378 35 +    230217 GATG----------------GA------AG---CA-GA--TA--T--T-TTGCCTT----------------AA-TTATCT----G-----A--------------------TT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 19
s Panthera_pardus.KV860321.1                                260087 35 +  18783137 GATG----------------GA------AG---CA-GA--TA--T--T-TTGCCTT----------------AA-TTATCT----G-----A--------------------TT
i Panthera_pardus.KV860321.1                             C 0 I 19
s Panthera_tigris.KE722367.1                               4717234 35 -   8748460 GATG----------------GA------AG---CA-GA--TA--T--T-TTGCCTT----------------AA-TTATCT----G-----A--------------------TT
i Panthera_tigris.KE722367.1                             C 0 I 19
s Pantholops_hodgsonii.KE114653.1                          1264836 35 -   2937107 GATG----------------GA------AA---CA-GA--TA--T--T-TTGCTTA----------------AA-TTATCT----G-----G--------------------GA
i Pantholops_hodgsonii.KE114653.1                        C 0 I 17
s Papio_anubis.CM001495.2                                183438419 40 + 183742232 C-TG----------------AGTcaaaaaa---ca-ga--ta--t--t-ttacctA----------------AG-TTATCA----G-----A--------------------GC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             2112 40 +     20448 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20558917 40 +  20919399 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                    855 40 +     41871 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     4141 40 +     27711 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  4226 40 +      9205 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9115 35 -     78924 TATG----------------GA------AG---CA-GA--TA--G--T-TTGCCTA----------------AA-TTATCT----G-----A--------------------GT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 19
s Perodicticus_ibeanus.k141_855320                            4924 35 +     13100 GATG----------------AA------CA---CT-GG--TA--T--T-TTGCCTA----------------AA-TCATCT----G-----G--------------------AG
i Perodicticus_ibeanus.k141_855320                       C 0 I 19
s Perodicticus_potto.k141_1092580                             3292 35 +     25941 GATG----------------AA------CA---CT-GG--TA--T--T-TTGCCTA----------------AA-TCATCT----G-----G--------------------AG
i Perodicticus_potto.k141_1092580                        C 0 I 19
s Perognathus_longimembris.PerPac_flattened_line_34437       25545 27 +     32600 ------------------------------------TA--CCTAT--T-TTATTTA----------------AA-TTATCT----G-----A--------------------AT
i Perognathus_longimembris.PerPac_flattened_line_34437   I 8 I 17
s Petromus_typicus.PetTyp_scaffold_42190                     26591 17 -     29689 --------------------------------------------T--T-TTGCCTA----------------AA-TT--------A-----T--------------------GC
i Petromus_typicus.PetTyp_scaffold_42190                 I 307 I 25
s Phocoena_phocoena.PhoPho_flattened_line_24159               8797 35 +     63832 GATG----------------GA------AA---CA-GA--TA--T--T-TTGCTTA----------------AA-TTATCT----G-----A--------------------AA
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 19
s Piliocolobus_badius.k141_1234363                           38896 40 +     62158 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33618 40 +     89929 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            35034 40 +     51399 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14291270 40 -  14605196 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              698 35 +     22620 AATG----------------GA------AA---CA-GA--TA--T--T-TTGCCTA----------------AA-TGATCT----G-----A--------------------AC
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 18
s Platanista_gangetica.PlaMin_flattened_line_32310           34503 35 +     35617 GATG----------------GA------AA---CA-GA--TA--T--T-TTGCTTA----------------AA-TTATCT----G-----A--------------------AA
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 I 19
s Pongo_abelii.CM009266.2                                189126319 60 + 189387572 C-TG----------------AATcaaaaaa---ca-ga--ta--t--t-ttacCTA----------------AA-TTATCA----G-----AACTAGGCTCTTAAACATTTTGC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9565925 60 +   9816681 C-TG----------------AATCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AA-TTATCA----G-----AACTAGGCTCTTAAACATTTTGC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68545 40 -     81375 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                               366 40 +     19060 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2592623 35 -   4620579 GATG----------------AA------AA---CT-GG--TA--T--T-TTGCCTA----------------AA-TTATCT----G-----A--------------------AT
i Prolemur_simus.MPIZ01000396.1                          C 0 I 19
s Propithecus_coquerelli.NW_012148875.1                     986636 35 +   2598838 GATG----------------AA------AA---CT-GG--TA--T--T-TTGCCTA----------------AA-TTATCT----G-----A--------------------AG
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 19
s Propithecus_coronatus.k141_347390                          24925 35 +     38485 GATG----------------AA------AA---CT-GG--TA--T--T-TTGCCTA----------------AA-TTATCT----G-----A--------------------AG
i Propithecus_coronatus.k141_347390                      C 0 I 19
s Propithecus_diadema.k141_357118                             1086 35 +      4256 GATG----------------AA------AA---CT-GG--TA--T--T-TTGCCTA----------------AA-TTATCT----G-----A--------------------AG
i Propithecus_diadema.k141_357118                        C 0 I 19
s Propithecus_edwardsi.k141_1176054                          22444 35 +     35766 GATG----------------AA------AA---CT-GG--TA--T--T-TTGCCTA----------------AA-TTATCT----G-----A--------------------AG
i Propithecus_edwardsi.k141_1176054                      C 0 I 19
s Propithecus_perrieri.k141_1200571                            627 35 -     24134 GATG----------------AA------AA---CT-GG--TA--T--T-TTGCCTA----------------AA-TTATCT----G-----A--------------------AG
i Propithecus_perrieri.k141_1200571                      C 0 I 19
s Propithecus_tattersalli.k141_790011                        24439 35 -     67325 GATG----------------AA------AA---CT-GG--TA--T--T-TTGCCTA----------------AA-TTATCT----G-----A--------------------AG
i Propithecus_tattersalli.k141_790011                    C 0 I 19
s Propithecus_verreauxi.k141_956661                            684 35 -      6182 GATG----------------AA------AA---CT-GG--TA--T--T-TTGCCTA----------------AA-TTATCT----G-----A--------------------AG
i Propithecus_verreauxi.k141_956661                      C 0 I 19
s Pteronotus_parnellii.KE909381.1                            11496 11 -     21811 -------------------------------------------------------------------------A-TTATCT----G-----A--------------------AC
i Pteronotus_parnellii.KE909381.1                        I 7 I 19
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36944 35 +     42204 TATG----------------GA------AG---CA-GA--TA--T--T-TTGTCTG----------------AA-TTATCT----C-----A--------------------AT
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 19
s Pteropus_alecto.KB030862.1                              22973951 27 +  28871421 ---------------------------------CA-GA--TA--T--T-TTGGCTA----------------AA-TTATCT----G-----A--------------------AC
i Pteropus_alecto.KB030862.1                             I 4 I 21
s Pteropus_vampyrus.KN534172.1                                1889 27 -      8028 ---------------------------------CA-GA--TA--T--T-TTGGCTA----------------AA-TTATCT----G-----A--------------------AC
i Pteropus_vampyrus.KN534172.1                           I 4 I 21
s Puma_concolor.QAVW01001104.1                            20270542 35 -  38429054 GATG----------------GA------AG---CA-GT--TA--T--T-TTGCCTT----------------AA-TTATCT----G-----A--------------------TT
i Puma_concolor.QAVW01001104.1                           C 0 I 19
s Pygathrix_cinerea.k141_1153803                             10377 40 -     91421 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7604505 40 +   7812017 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10346 40 -     72585 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5400 35 +     55207 GGTG----------------GA------AA---CA-GA--TA--T--T-TTGCTTA----------------AA-TTATCT----G-----G--------------------AA
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 18
s Rhinolophus_sinicus.LVEH01000134.1                        367093 35 -   3329780 AATG-------------------------GAAACA-GA--TA--C--C-TTGGCTA----------------AA-TTATCT----G-----A--------------------AC
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 19
s Rhinopithecus_bieti.k119_217274                             2061 40 -     11128 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91231416 40 - 195417433 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7667065 40 +   7961872 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84936 27 -     96226 ---------------------------------CA-GA--TA--T--T-TTGGCTA----------------AA-TTATCT----G-----A--------------------AC
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 4 I 21
s Saiga_tatarica.SaiTat_scaffold_373180                       4021 34 +      4321 GATG----------------GA------AA---CA-GA--TA--T--T-TTGCTTA----------------AA-TTATCT----G--------------------------GA
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 I 17
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151636 15 -    313613 -----------------------------------------------------CGA----------------AA-TTCTCA----G-----A--------------------AC
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 19 I 18
s Semnopithecus_entellus.k141_11662                          14889 40 -     19888 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      22091 40 +     39453 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2617 40 +     27826 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             2138 40 -     19483 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      2200 40 +      7198 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         10460 40 +     15514 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sorex_araneus.JH798187.1                                13647504  8 -  18376816 -----------------------------------------------------------------------------ATCA----G-----A--------------------GC
i Sorex_araneus.JH798187.1                               I 23 I 649
s Solenodon_paradoxus.SolPar_flattened_line_5840            187937 15 -    191337 GAAG----------------GA------AA---CA-GA--CA--T---------------------------------------------------------------------
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 I 34
s Spermophilus_dauricus.KZ294078.1                         1948495 27 -   3870691 ------------------------------------GAG-TA--TT-T-TTGCCTA----------------AA-TTATCT----A-----A--------------------AC
i Spermophilus_dauricus.KZ294078.1                       I 8 I 19
s Spilogale_gracilis.SpiGra_flattened_line_13525             27482 32 +     97271 TATG----------------GA------AG---CA-GA--TA--T--T-TTGCCCA----------------AA-TTGTCT----G----------------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 18
s Suricata_suricatta.SurSur_flattened_line_6629              14473 35 -    196729 GATA----------------CA------AA---CA-AG--TA--T--T-TTGCCTT----------------AA-TTATCT----G-----A--------------------AT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 19
s Sus_scrofa.CM000828.4                                   62882722 38 -  69701581 --TG----------------GA------AA---GA-GA--TG--T--T-TTGCTTA----------------AA-TTATTT----GACTTGA--------------------CC
i Sus_scrofa.CM000828.4                                  I 1 I 19
s Symphalangus_syndactylus.tarseq_199                      1088646 60 -   1523678 C-TG----------------AATCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AA-TTATCA----G-----AACAAGGCTCTTAAACATTTTGC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 7084 35 +     41958 AATG----------------GA------AA---TA-GA--CA--T--T-CTGCCTA----------------AA-TTATCT----G-----A--------------------AT
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 19
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69737 15 +    116680 AATG----------------GA------AA---CA-GA--TA--T---------------------------------------------------------------------
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 I 27
s Tapirus_indicus.TapInd_scaffold_9301                      115474 36 -    156842 GACG----------------GA------AA---CA-GA--TA--T--TTTTGCCTA----------------AG-TTATCT----T-----A--------------------AC
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 19
s Tapirus_terrestris.TapTer_scaffold_755                    383929 35 +    539355 GACA----------------GA------AA---CA-GA--TA--T--T-TTGCCTA----------------AG-TTATCT----T-----A--------------------AC
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 19
s Tarsius_lariang.k141_2201908                               10924 35 +     70052 AGTG----------------AA------AA---CA-GA--TA--T--T-TTGCCTA----------------AA-TTATCT----A-----A--------------------GC
i Tarsius_lariang.k141_2201908                           C 0 I 18
s Tarsius_wallacei.k141_780063                               15229 35 +     25099 AGTG----------------AA------AA---CA-GA--TA--T--T-TTGCCTA----------------AA-TTATCT----A-----A--------------------GC
i Tarsius_wallacei.k141_780063                           C 0 I 18
s Theropithecus_gelada.CM009954.1                        186423463 40 + 186847797 C-TG----------------AGTcaaaaaa---ca-ga--ta--t--t-ttaccTA----------------AG-TTATCA----G-----A--------------------GC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103722 21 +    114563 ------------------------------------CA--TA--T--T-TGACCTA----------------AA-TT--------A-----A--------------------GC
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 8 I 25
s Tonatia_saurophila.TonSau_scaffold_294                     79244 11 +    610378 -------------------------------------------------------------------------A-TTATCT----G-----A--------------------AC
i Tonatia_saurophila.TonSau_scaffold_294                 I 7 I 19
s Tolypeutes_matacus.TolMat_scaffold_228639                   2114 15 +      8208 GATG----------------CA------AA---CA-GA--TA--T---------------------------------------------------------------------
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 I 27
s Trachypithecus_auratus.k141_722599                          6191 40 -     20410 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    10387 40 +     15221 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        6292 40 +     19930 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2722 40 -     19997 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42841 40 -     60166 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        10314 40 -     27529 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     10254 40 -     18194 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           3989 40 -     21137 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2692 40 -     10723 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1844 40 +      9834 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        20162 40 +     32220 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5934259 40 +   6242583 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        3506 40 +     20839 C-TG----------------AGTCAAAAAA---CA-GA--TA--T--T-TTACCTA----------------AG-TTATCA----G-----A--------------------GC
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                   1067 35 -      1748 GATT----------------GA------AA---CA-GA--TA--T--T-TTCCTTA----------------AA-TTATGT----G-----A--------------------AA
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 I 18
s Tupaia_chinensis.KB320699.1                              2150673 35 +   4065304 GATG----------------AA------AA---CA-Ga--ta--t--t-ttatctg----------------aa-atatcT----G-----A--------------------AC
i Tupaia_chinensis.KB320699.1                            C 0 I 18
s Tupaia_tana.TupTan_flattened_line_97126                     3971 35 -     10553 GATG----------------AA------AA---CA-GA--TA--T--T-TTACCTG----------------AA-ATATCT----G-----A--------------------AC
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 18
s Tursiops_truncatus.MRVK01000835.1                       15737997 35 +  33153633 GGTG----------------GA------AA---CA-Ga--ta--t--t-ttgctta----------------aa-ttatct----g-----a--------------------aa
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 19
s Uropsilus_gracilis.UroGra_scaffold_12083                   51821 15 -     77625 GATG----------------AA------AA---TA-GA--TA--T---------------------------------------------------------------------
i Uropsilus_gracilis.UroGra_scaffold_12083               I 40 I 81
s Ursus_maritimus.KK499267.1                               4847187 34 -   5085361 TATG----------------GA------AG---CA--A--TA--T--T-TTGCCTA----------------AA-TTATCT----G-----a--------------------gt
i Ursus_maritimus.KK499267.1                             C 0 I 19
s Varecia_rubra.k141_590885                                   7311 35 +     50397 AATG----------------AA------AA---CG-GG--TA--T--T-TTGCCTA----------------AA-TTATCT----G-----A--------------------AG
i Varecia_rubra.k141_590885                              C 0 I 19
s Varecia_variegata.k141_1128296                              7359 35 +     24756 AATG----------------AA------AA---CG-GG--TA--T--T-TTGCCTA----------------AA-TTATCT----G-----A--------------------AG
i Varecia_variegata.k141_1128296                         C 0 I 19
s Vicugna_pacos.KN270157.1                                 5368678 35 -   5488506 GATG----------------GA------AA---CA-TA--TA--C--T-TTGCTTA----------------AA-TTATCT----G-----A--------------------AC
i Vicugna_pacos.KN270157.1                               C 0 I 19
s Vulpes_lagopus.VulLag_flattened_line_30954                  7647 32 -     43706 GATG----------------GA------AG---CA-GA--TA--T--T-TTGCCTA----------------AA-TTATCT----G----------------------------
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 18
s Xerus_inauris.XerIna_scaffold_48378                        19996 28 -     24430 ------------------------------------GAGGTA--TT-T-TTGCCTA----------------AA-TTATAT----A-----A--------------------AC
i Xerus_inauris.XerIna_scaffold_48378                    I 8 I 19
s Zalophus_californianus.ZalCal_flattened_line_63728          2108 35 +      2932 TATG----------------TG------AG---CA-GA--CA--T--T-TTGCCTA----------------AA-TTATCT----G-----A--------------------AT
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 I 19
s Zapus_hudsonius.ZapHud_scaffold_11398                      10258  8 +     63895 GATG----------------GA------AC------------------------------------------------------------------------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 25
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11689 35 +     12536 GATG----------------GA------AA---CA-GA--TA--T--T-TTGCTTA----------------AA-TTATCT----G-----A--------------------AA
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 I 19
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lepilemur_septentrionalis.k141_185316                      22934  4 +     54090 I
e Lepilemur_ruficaudatus.k141_582783                           754 56 -      1589 I
e Lepilemur_dorsalis.k141_577674                             24879  4 +     45836 I
e Lepilemur_ankaranensis.k141_596936                          6932  4 -     23766 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Galagoides_demidoff.k141_31856                              3217  0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1946 1 +     62944 T
s Acinonyx_jubatus.LLWD01001279.1                           823582 1 -   1699592 T
i Acinonyx_jubatus.LLWD01001279.1                        I 19 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507303 1 -  29979442 T
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 19 C 0
s Ailurus_fulgens.LNAC01001112.1                             75902 1 -    347723 T
i Ailurus_fulgens.LNAC01001112.1                         I 19 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     65286 1 -     89534 A
i Allactaga_bullata.AllBul_scaffold_9566                 I 25 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9926 1 -     52922 T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9857 1 -     28001 T
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                           303 1 -     18505 T
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           1152 1 -     12518 T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675681 1 -   2318259 C
i Ammotragus_lervia.NIVO01071767.1                       I 17 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183412 1 +    412891 T
i Anoura_caudifer.AnoCau_scaffold_1412                   I 19 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             98163 1 -    100397 T
i Antilocapra_americana.AntAmePen_scaffold_12469         I 18 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7583 1 +     20879 T
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 19 I 6
s Arctocebus_calabarensis.k141_288239                        14742 1 +     17124 T
i Arctocebus_calabarensis.k141_288239                    I 19 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2769 1 +     43469 T
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 19 C 0
s Avahi_laniger.k141_765380                                  49619 1 -     92717 T
i Avahi_laniger.k141_765380                              I 19 C 0
s Avahi_peyrierasi.k141_1424874                              50244 1 +     85213 T
i Avahi_peyrierasi.k141_1424874                          I 19 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191908 1 +  23207421 T
i Balaenoptera_acutorostrata.KI537508.1                  I 19 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2373 1 -     18090 T
i Balaenoptera_bonaerensis.DF707048.1                    I 19 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26603 1 +     34529 C
i Beatragus_hunteri.BeaHun_scaffold_50177                I 17 C 0
s Bison_bison.KN261452.1                                    199660 1 -    288883 C
i Bison_bison.KN261452.1                                 I 17 C 0
s Bos_indicus.CM003047.1                                  20272865 1 +  48749331 C
i Bos_indicus.CM003047.1                                 I 17 C 0
s Bos_mutus.JH880303.1                                     1125421 1 -   1948126 C
i Bos_mutus.JH880303.1                                   I 17 C 0
s Bos_taurus.CM000203.6                                   18083503 1 +  45695690 C
i Bos_taurus.CM000203.6                                  I 17 C 0
s Bubalus_bubalis.KI419123.1                               2819170 1 +   4408762 C
i Bubalus_bubalis.KI419123.1                             I 17 C 0
s Camelus_bactrianus.KN276810.1                            9999241 1 -  17673402 T
i Camelus_bactrianus.KN276810.1                          I 19 C 0
s Camelus_dromedarius.KN272107.1                           2331705 1 -   7040546 T
i Camelus_dromedarius.KN272107.1                         I 19 C 0
s Camelus_ferus.KB017975.1                                  399981 1 -   1652518 T
i Camelus_ferus.KB017975.1                               I 19 C 0
s CanFam4.chr16                                           17796074 1 -  60362399 T
i CanFam4.chr16                                          I 18 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182131 1 -    185531 T
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 18 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031517 1 -   9314153 T
i Canis_lupus_dingo.QKWQ01000480.1                       I 18 C 0
s Canis_lupus_familiaris.chr16                            17955782 1 -  59632846 T
i Canis_lupus_familiaris.chr16                           I 18 C 0
s Canis_lupus_orion.HG994398.1                            18497082 1 +  63665305 T
i Canis_lupus_orion.HG994398.1                           I 18 C 0
s Capra_aegagrus.CM003241.1                               18829799 1 +  46296322 C
i Capra_aegagrus.CM003241.1                              I 17 C 0
s Capra_hircus.CM004588.1                                 18060519 1 -  44709034 C
i Capra_hircus.CM004588.1                                I 17 C 0
s Carlito_syrichta.NW_007259797.1                           141363 1 -    496798 T
i Carlito_syrichta.NW_007259797.1                        I 18 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                3186 1 -     11696 T
i Carollia_perspicillata.CarPer_scaffold_92756           I 19 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133958 1 +    179628 T
i Castor_canadensis.CasCan_scaffold_2074                 I 19 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89561 1 +    217609 T
i Catagonus_wagneri.CatWag_scaffold_2839                 I 19 C 0
s Cephalopachus_bancanus.k141_2037105                         5278 1 -      8605 T
i Cephalopachus_bancanus.k141_2037105                    I 18 C 0
s Ceratotherium_simum.JH767749.1                          12228199 1 +  27778364 T
i Ceratotherium_simum.JH767749.1                         I 19 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2917 1 -      3715 T
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     I 19 C 0
s Cercocebus_atys.KQ010504.1                               4470886 1 +   4669795 T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         9435 1 -     19203 T
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3856 1 +      8260 T
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           4084 1 +     27781 T
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         4242 1 -     20310 T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           7226 1 +     29689 T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            1664 1 +      9989 T
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9910 1 -     27936 T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9936 1 -     11289 T
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38812308 1 +  39242232 T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21218007 1 -  21565898 T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       35126 1 -     53127 T
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        2411 1 +      7159 T
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9929 1 -     27947 T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9905 1 +     17596 T
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         40405 1 -     41420 T
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            5095 1 -      6351 T
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       I 27 C 0
s Cheirogaleus_major.k141_333249                             17035 1 -     52598 T
i Cheirogaleus_major.k141_333249                         I 19 C 0
s Cheirogaleus_medius.k141_1055463                           12385 1 +     57038 T
i Cheirogaleus_medius.k141_1055463                       I 19 C 0
s Chlorocebus_aethiops.ctg25                              18423868 1 -  18827391 T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       10309 1 -     50209 T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135417317 1 + 135778131 T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15474 1 +     19366 T
i Choloepus_didactylus.ChoDid_scaffold_45914             I 30 C 0
s Choloepus_hoffmanni.KN194906.1                            170573 1 +    839153 T
i Choloepus_hoffmanni.KN194906.1                         I 30 C 0
s Colobus_angolensis.KN981557.1                            1905843 1 +   2368649 T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199945513 1 + 200372422 T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              32384 1 +     84244 T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10826 1 -     20389 T
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 19 C 0
s Crocidura_indochinensis.CroInd_scaffold_287352               831 1 +      4208 T
i Crocidura_indochinensis.CroInd_scaffold_287352         I 130 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24531 1 -     87169 T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 19 C 0
s Dasypus_novemcinctus.JH564415.1                            61365 1 +   2246927 T
i Dasypus_novemcinctus.JH564415.1                        I 27 C 0
s Daubentonia_madagascariensis.ctg71                      12533206 1 -  12879189 T
i Daubentonia_madagascariensis.ctg71                     I 19 C 0
s Delphinapterus_leucas.KZ290073.1                        16811543 1 +  35494412 T
i Delphinapterus_leucas.KZ290073.1                       I 19 C 0
s Desmodus_rotundus.KZ672289.1                             8628218 1 +  20541912 T
i Desmodus_rotundus.KZ672289.1                           I 19 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  670049 1 +   1390856 T
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 19 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2807 1 +    198055 t
i Diceros_bicornis.DicBicMic_scaffold_5955               I 19 C 0
s Dipodomys_ordii.KN672350.1                              18896111 1 +  37912305 C
i Dipodomys_ordii.KN672350.1                             I 16 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  12329 1 +     14536 C
i Dipodomys_stephensi.DipSte_scaffold_75855              I 16 C 0
s Eidolon_helvum.KE759718.1                                   7731 1 +     11740 T
i Eidolon_helvum.KE759718.1                              I 21 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310834 1 +    607251 T
i Elaphurus_davidianus.JRFZ01104969.1                    I 18 C 0
s Enhydra_lutris.KZ291758.1                               16326089 1 -  41312741 T
i Enhydra_lutris.KZ291758.1                              I 19 C 0
s Eptesicus_fuscus.JH977646.1                              2144373 1 -  14770903 t
i Eptesicus_fuscus.JH977646.1                            I 18 C 0
s Equus_asinus.JREZ01000139.1                              1280086 1 +   4378816 T
i Equus_asinus.JREZ01000139.1                            I 19 C 0
s Equus_caballus.CM000403.2                               18527907 1 -  39960074 T
i Equus_caballus.CM000403.2                              I 19 C 0
s Equus_przewalskii.KK951119.1                               29922 1 +    498745 T
i Equus_przewalskii.KK951119.1                           I 19 C 0
s Erinaceus_europaeus.JH835339.1                           3325621 1 -   7059049 C
i Erinaceus_europaeus.JH835339.1                         I 18 C 0
s Erythrocebus_patas.Contig38                             21200499 1 -  21539334 T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11219 1 +    133382 T
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 19 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             25156 1 -     44125 T
i Eubalaena_japonica.EubJap_flattened_line_31514         I 19 C 0
s Eulemur_albifrons.k141_342033                               9715 1 -     14127 T
i Eulemur_albifrons.k141_342033                          I 19 C 0
s Eulemur_collaris.k141_377015                                2413 1 -     16928 T
i Eulemur_collaris.k141_377015                           I 19 C 0
s Eulemur_coronatus.k141_885031                              11446 1 -     25546 T
i Eulemur_coronatus.k141_885031                          I 19 C 0
s Eulemur_flavifrons.k141_1184614                             8631 1 +     26330 T
i Eulemur_flavifrons.k141_1184614                        I 19 C 0
s Eulemur_fulvus.k141_544389                                  9888 1 +     23973 T
i Eulemur_fulvus.k141_544389                             I 19 C 0
s Eulemur_macaco.k141_1562045                                 8631 1 +     75513 T
i Eulemur_macaco.k141_1562045                            I 19 C 0
s Eulemur_mongoz.k141_232305                                  6583 1 +     97555 T
i Eulemur_mongoz.k141_232305                             I 19 C 0
s Eulemur_rubriventer.k141_571033                             9509 1 +     26496 T
i Eulemur_rubriventer.k141_571033                        I 19 C 0
s Eulemur_rufus.k141_754848                                  18800 1 +     18826 T
i Eulemur_rufus.k141_754848                              I 19 C 0
s Eulemur_sanfordi.k141_1122526                               9694 1 +    111500 T
i Eulemur_sanfordi.k141_1122526                          I 19 C 0
s Felis_catus.CM001381.2                                  20233452 1 + 206538554 T
i Felis_catus.CM001381.2                                 I 19 C 0
s Felis_catus_fca126.CM031415.1                           20192282 1 + 205367284 T
i Felis_catus_fca126.CM031415.1                          I 19 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  5807 1 -     36744 T
i Felis_nigripes.FelNig_flattened_line_20823             I 19 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25771 1 +     26054 T
i Galeopterus_variegatus.GalVar_scaffold_56069           I 19 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     608799 1 -    660261 T
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 17 C 0
s Glis_glis.GliGli_scaffold_19807                            30661 1 +     49224 T
i Glis_glis.GliGli_scaffold_19807                        I 19 C 0
s Gorilla_beringei.k141_3596273                              11181 1 -     32273 T
i Gorilla_beringei.k141_3596273                          I 60 I 14
s Gorilla_gorilla.LT578341.1                             186333329 1 + 186649187 T
i Gorilla_gorilla.LT578341.1                             I 60 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   30385 1 +     78134 C
i Graphiurus_murinus.GraMur_scaffold_10447               I 19 C 0
s Hapalemur_alaotrensis.k141_170648                           2780 1 -     19426 T
i Hapalemur_alaotrensis.k141_170648                      I 19 C 0
s Hapalemur_gilberti.k141_488810                              7924 1 -     15286 T
i Hapalemur_gilberti.k141_488810                         I 19 C 0
s Hapalemur_griseus.k141_1511508                              9562 1 +     18253 T
i Hapalemur_griseus.k141_1511508                         I 19 C 0
s Hapalemur_meridionalis.k141_248335                          9665 1 -     41752 T
i Hapalemur_meridionalis.k141_248335                     I 19 C 0
s Hapalemur_occidentalis.k141_907772                          9498 1 -     16460 T
i Hapalemur_occidentalis.k141_907772                     I 19 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238445 1 +    327341 T
i Helogale_parvula.HelPar_flattened_line_2585            I 19 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18003 1 +     36099 C
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 17 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112356 1 +    128679 T
i Hippopotamus_amphibius.HipAmp_scaffold_9076            I 19 C 0
s Hipposideros_armiger.JXIK01000431.1                       108600 1 +   1711038 T
i Hipposideros_armiger.JXIK01000431.1                    I 19 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               40041 1 +     43066 T
i Hipposideros_galeritus.HipGal_scaffold_29171           I 19 C 0
s Hoolock_leuconedys.ctg274                                    430076 1 +    630532 T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40920 1 +     55795 T
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 18 C 0
s Hylobates_agilis.k141_307679                               13007 1 -     15490 T
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              55012 1 +     67168 T
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189538662 1 - 191637585 T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3331555 1 -  11177569 T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      81449 1 +    135385 G
i Hystrix_cristata.HysCri_scaffold_5660                  I 23 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514903 1 -   7955117 C
i Ictidomys_tridecemlineatus.JH393364.1                  I 19 I 6
s Indri_indri.k141_3655594                                   18481 1 +     31101 T
i Indri_indri.k141_3655594                               I 19 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22760 1 +     23964 T
i Inia_geoffrensis.IniGeo_flattened_line_48101           I 19 C 0
s Jaculus_jaculus.JH725527.1                               8271676 1 -   9596543 A
i Jaculus_jaculus.JH725527.1                             I 18 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                2122 1 -      3359 T
i Kogia_breviceps.KogBre_flattened_line_192630           I 19 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    12794 1 -     42476 T
i Lasiurus_borealis.LasBor_scaffold_32767                I 18 C 0
s Lemur_catta.scaffold_24                                 15520024 1 -  30322482 T
i Lemur_catta.scaffold_24                                I 19 C 0
s Lepilemur_ankaranensis.k141_596936                          6936 1 -     23766 T
i Lepilemur_ankaranensis.k141_596936                     I 4 C 0
s Lepilemur_dorsalis.k141_577674                             24883 1 +     45836 T
i Lepilemur_dorsalis.k141_577674                         I 4 C 0
s Lepilemur_ruficaudatus.k141_420445                         31796 1 -     32627 T
i Lepilemur_ruficaudatus.k141_420445                     I 57 C 0
s Lepilemur_septentrionalis.k141_185316                      22938 1 +     54090 T
i Lepilemur_septentrionalis.k141_185316                  I 4 C 0
s Leptonychotes_weddellii.KB714746.1                       3036423 1 +   3914936 T
i Leptonychotes_weddellii.KB714746.1                     I 19 C 0
s Lipotes_vexillifer.KE559953.1                             267812 1 -    662738 T
i Lipotes_vexillifer.KE559953.1                          I 19 C 0
s Lophocebus_aterrimus.ctg367                              1432430 1 +   1826925 T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            1003 1 +     11245 T
i Loris_lydekkerianus.k141_2539221                       I 19 C 0
s Loris_tardigradus.ctg83                                   999840 1 +   6120653 T
i Loris_tardigradus.ctg83                                I 19 C 0
s Lycaon_pictus.CM007581.1                                17952022 1 -  59628241 t
i Lycaon_pictus.CM007581.1                               I 18 C 0
s Macaca_arctoides.k141_2326796                               2251 1 +     40492 T
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59671506 1 +  60120075 T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  8006 1 -     26193 T
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75803 1 -    114318 T
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  1518 1 -     23192 T
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10971 1 -     29190 T
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  19538 1 +     37952 T
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834626 1 + 187317192 T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25453189 1 -  25927173 T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  75387 1 +     89720 T
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 2385 1 +     20474 T
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   2186 1 -     14993 T
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  325058 1 -    668171 T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                  489 1 -     24072 T
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               21125 1 -     45290 T
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87837 1 +     94391 T
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 21 C 0
s Mandrillus_leucophaeus.scaffold280                      23932674 1 -  24302211 T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346851 1 +    752769 T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15909 1 +    737560 T
i Manis_javanica.JSZB01003497.1                          I 19 C 0
s Manis_pentadactyla.KN006162.1                              47298 1 -    317179 T
i Manis_pentadactyla.KN006162.1                          I 19 C 0
s Marmota_marmota.CZRN01000018.1                          33097753 1 -  40650429 T
i Marmota_marmota.CZRN01000018.1                         I 19 I 6
s Megaderma_lyra.MegLyr_scaffold_4542                         7107 1 -    207569 T
i Megaderma_lyra.MegLyr_scaffold_4542                    I 19 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6802 1 +     13704 T
i Mellivora_capensis.MelCap_flattened_line_69365         I 19 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3428 1 +     10310 T
i Mesoplodon_bidens.MesBid_scaffold_108144               I 19 C 0
s Microcebus_murinus.CM007674.1                           18287420 1 -  93316391 T
i Microcebus_murinus.CM007674.1                          I 19 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13729 1 -     19307 T
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 19 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849421 1 +   8254450 T
i Miniopterus_natalensis.LDJU01000034.1                  I 19 I 199
s Miniopterus_schreibersii.MinSch_scaffold_18080             33297 1 +     64694 T
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 19 C 0
s Miopithecus_ogouensis.k141_534055                           4424 1 -     28506 T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62753 1 -     63350 T
i Mirounga_angustirostris.MirAng_flattened_line_22144    I 19 C 0
s Mirza_zaza.k141_952172                                      4988 1 -     37649 T
i Mirza_zaza.k141_952172                                 I 19 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26933 1 -    437263 T
i Monodon_monoceros.MonMon_M_scaffold_103                I 19 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138133 1 -    366855 T
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 19 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                    885 1 +     82753 T
i Moschus_moschiferus.MosMos_scaffold_13123              I 18 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31653 1 +     37127 T
i Mungos_mungo.MunMun_flattened_line_23663               I 19 C 0
s Murina_feae.MurFea_scaffold_85699                           5445 1 +     14753 T
i Murina_feae.MurFea_scaffold_85699                      I 19 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2654 1 +     14296 C
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 19 C 0
s Mustela_putorius.JH418006.1                               297987 1 -  14710649 T
i Mustela_putorius.JH418006.1                            I 19 C 0
s Myotis_brandtii.KE162005.1                                278617 1 -  10118263 T
i Myotis_brandtii.KE162005.1                             I 19 C 0
s Myotis_davidii.KB100139.1                                1586172 1 -   6019432 t
i Myotis_davidii.KB100139.1                              I 19 C 0
s Myotis_lucifugus.GL429869.1                              3902381 1 -   4330536 T
i Myotis_lucifugus.GL429869.1                            I 19 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32941 1 +     33610 T
i Myotis_myotis.MyoMyo_scaffold_28916                    I 19 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186425 1 +    196477 T
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 27 C 0
s Nannospalax_galili.KL204047.1                            2025816 1 -   3037898 A
i Nannospalax_galili.KL204047.1                          I 26 C 0
s Nasalis_larvatus.k141_413338                               10424 1 +     21681 T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865889 1 +   7148211 T
i Neophocaena_asiaeorientalis.KZ687982.1                 I 19 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756692 1 +    783361 T
i Noctilio_leporinus.NocLep_scaffold_251                 I 20 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146283 1 -   9404916 T
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 18 C 0
s Nycticebus_bengalensis.LG01                            102574803 1 - 196305487 T
i Nycticebus_bengalensis.LG01                            I 16 C 0
s Nycticebus_coucang.k141_5327727                             2489 1 +      8486 T
i Nycticebus_coucang.k141_5327727                        I 16 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105745230 1 + 199412804 T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 16 C 0
s Ochotona_princeps.JH802162.1                             1358960 1 +   3988456 C
i Ochotona_princeps.JH802162.1                           I 2906 C 0
s Odobenus_rosmarus.KB229312.1                              501040 1 -   2017862 T
i Odobenus_rosmarus.KB229312.1                           I 19 C 0
s Odocoileus_virginianus.KZ100018.1                         145205 1 +    630418 T
i Odocoileus_virginianus.KZ100018.1                      I 18 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          76716 1 -    150152 T
i Okapia_johnstoni.LVCL01S0005463.1                      I 18 C 0
s Orcinus_orca.KB316932.1                                  2781804 1 -  10937097 T
i Orcinus_orca.KB316932.1                                I 19 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       459036 1 -    559221 T
i Otocyon_megalotis.JAEUCK010005147.1                    I 18 C 0
s Ovis_aries.CM001607.2                                   17585978 1 +  44047080 C
i Ovis_aries.CM001607.2                                  I 17 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173955 1 -    191736 C
i Ovis_canadensis.OviCan_scaffold_2572                   I 17 C 0
s Pan_paniscus.KQ411613.1                                    39298 1 +     80009 T
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03001836.1                             25215 1 +     51860 T
i Pan_troglodytes.NBAG03001836.1                         C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  147432 1 +    230217 T
i Panthera_onca.PanOnc_flattened_line_3271               I 19 C 0
s Panthera_pardus.KV860321.1                                260141 1 +  18783137 T
i Panthera_pardus.KV860321.1                             I 19 C 0
s Panthera_tigris.KE722367.1                               4717288 1 -   8748460 T
i Panthera_tigris.KE722367.1                             I 19 C 0
s Pantholops_hodgsonii.KE114653.1                          1264888 1 -   2937107 C
i Pantholops_hodgsonii.KE114653.1                        I 17 C 0
s Papio_anubis.CM001495.2                                183438459 1 + 183742232 T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             2152 1 +     20448 T
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20558957 1 +  20919399 T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                    895 1 +     41871 T
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     4181 1 +     27711 T
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  4266 1 +      9205 T
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9169 1 -     78924 T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 19 C 0
s Perodicticus_ibeanus.k141_855320                            4978 1 +     13100 T
i Perodicticus_ibeanus.k141_855320                       I 19 C 0
s Perodicticus_potto.k141_1092580                             3346 1 +     25941 T
i Perodicticus_potto.k141_1092580                        I 19 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25589 1 +     32600 C
i Perognathus_longimembris.PerPac_flattened_line_34437   I 17 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8851 1 +     63832 T
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 19 C 0
s Piliocolobus_badius.k141_1234363                           38936 1 +     62158 T
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33658 1 +     89929 T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            35074 1 +     51399 T
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14291310 1 -  14605196 T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              751 1 +     22620 T
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 18 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34557 1 +     35617 T
i Platanista_gangetica.PlaMin_flattened_line_32310       I 19 C 0
s Pongo_abelii.CM009266.2                                189126379 1 + 189387572 T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9565985 1 +   9816681 T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68585 1 -     81375 T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                               406 1 +     19060 T
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2592677 1 -   4620579 T
i Prolemur_simus.MPIZ01000396.1                          I 19 C 0
s Propithecus_coquerelli.NW_012148875.1                     986690 1 +   2598838 T
i Propithecus_coquerelli.NW_012148875.1                  I 19 C 0
s Propithecus_coronatus.k141_347390                          24979 1 +     38485 T
i Propithecus_coronatus.k141_347390                      I 19 C 0
s Propithecus_diadema.k141_357118                             1140 1 +      4256 T
i Propithecus_diadema.k141_357118                        I 19 C 0
s Propithecus_edwardsi.k141_1176054                          22498 1 +     35766 T
i Propithecus_edwardsi.k141_1176054                      I 19 C 0
s Propithecus_perrieri.k141_1200571                            681 1 -     24134 T
i Propithecus_perrieri.k141_1200571                      I 19 C 0
s Propithecus_tattersalli.k141_790011                        24493 1 -     67325 T
i Propithecus_tattersalli.k141_790011                    I 19 C 0
s Propithecus_verreauxi.k141_956661                            738 1 -      6182 T
i Propithecus_verreauxi.k141_956661                      I 19 C 0
s Pteronotus_parnellii.KE909381.1                            11526 1 -     21811 t
i Pteronotus_parnellii.KE909381.1                        I 19 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36998 1 +     42204 T
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 19 C 0
s Pteropus_alecto.KB030862.1                              22973999 1 +  28871421 T
i Pteropus_alecto.KB030862.1                             I 21 C 0
s Pteropus_vampyrus.KN534172.1                                1937 1 -      8028 T
i Pteropus_vampyrus.KN534172.1                           I 21 C 0
s Puma_concolor.QAVW01001104.1                            20270596 1 -  38429054 T
i Puma_concolor.QAVW01001104.1                           I 19 C 0
s Pygathrix_cinerea.k141_1153803                             10417 1 -     91421 T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7604545 1 +   7812017 T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10386 1 -     72585 T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5453 1 +     55207 T
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 18 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        367147 1 -   3329780 T
i Rhinolophus_sinicus.LVEH01000134.1                     I 19 C 0
s Rhinopithecus_bieti.k119_217274                             2101 1 -     11128 T
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91231456 1 - 195417433 T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7667105 1 +   7961872 T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84984 1 -     96226 A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 21 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       4072 1 +      4321 C
i Saiga_tatarica.SaiTat_scaffold_373180                  I 17 C 0
s Semnopithecus_entellus.k141_11662                          14929 1 -     19888 T
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      22131 1 +     39453 T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2657 1 +     27826 T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             2178 1 -     19483 T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      2240 1 +      7198 T
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         10500 1 +     15514 T
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187986 1 -    191337 T
i Solenodon_paradoxus.SolPar_flattened_line_5840         I 34 C 0
s Sorex_araneus.JH798187.1                                13648161 1 -  18376816 T
i Sorex_araneus.JH798187.1                               I 649 C 0
s Spermophilus_dauricus.KZ294078.1                         1948541 1 -   3870691 T
i Spermophilus_dauricus.KZ294078.1                       I 19 I 6
s Spilogale_gracilis.SpiGra_flattened_line_13525             27532 1 +     97271 T
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 18 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14527 1 -    196729 T
i Suricata_suricatta.SurSur_flattened_line_6629          I 19 C 0
s Sus_scrofa.CM000828.4                                   62882779 1 -  69701581 t
i Sus_scrofa.CM000828.4                                  I 19 C 0
s Symphalangus_syndactylus.tarseq_199                      1088706 1 -   1523678 T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 7138 1 +     41958 T
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 19 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69779 1 +    116680 T
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 27 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115529 1 -    156842 T
i Tapirus_indicus.TapInd_scaffold_9301                   I 19 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383983 1 +    539355 T
i Tapirus_terrestris.TapTer_scaffold_755                 I 19 C 0
s Tarsius_lariang.k141_2201908                               10977 1 +     70052 T
i Tarsius_lariang.k141_2201908                           I 18 C 0
s Tarsius_wallacei.k141_780063                               15282 1 +     25099 T
i Tarsius_wallacei.k141_780063                           I 18 C 0
s Theropithecus_gelada.CM009954.1                        186423503 1 + 186847797 T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   2156 1 +      8208 T
i Tolypeutes_matacus.TolMat_scaffold_228639              I 27 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     79274 1 +    610378 T
i Tonatia_saurophila.TonSau_scaffold_294                 I 19 C 0
s Trachypithecus_auratus.k141_722599                          6231 1 -     20410 T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    10427 1 +     15221 T
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        6332 1 +     19930 T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2762 1 -     19997 T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42881 1 -     60166 T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        10354 1 -     27529 T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     10294 1 -     18194 T
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           4029 1 -     21137 T
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2732 1 -     10723 T
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1884 1 +      9834 T
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        20202 1 +     32220 T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5934299 1 +   6242583 T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        3546 1 +     20839 T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                   1120 1 -      1748 T
i Tragulus_javanicus.TraJav_scaffold_140459              I 18 I 13
s Tupaia_chinensis.KB320699.1                              2150726 1 +   4065304 T
i Tupaia_chinensis.KB320699.1                            I 18 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     4024 1 -     10553 T
i Tupaia_tana.TupTan_flattened_line_97126                I 18 C 0
s Tursiops_truncatus.MRVK01000835.1                       15738051 1 +  33153633 T
i Tursiops_truncatus.MRVK01000835.1                      I 19 C 0
s Ursus_maritimus.KK499267.1                               4847240 1 -   5085361 t
i Ursus_maritimus.KK499267.1                             I 19 C 0
s Varecia_rubra.k141_590885                                   7365 1 +     50397 T
i Varecia_rubra.k141_590885                              I 19 C 0
s Varecia_variegata.k141_1128296                              7413 1 +     24756 T
i Varecia_variegata.k141_1128296                         I 19 C 0
s Vicugna_pacos.KN270157.1                                 5368732 1 -   5488506 T
i Vicugna_pacos.KN270157.1                               I 19 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7697 1 -     43706 T
i Vulpes_lagopus.VulLag_flattened_line_30954             I 18 C 0
s Xerus_inauris.XerIna_scaffold_48378                        20043 1 -     24430 T
i Xerus_inauris.XerIna_scaffold_48378                    I 19 I 6
s Zalophus_californianus.ZalCal_flattened_line_63728          2162 1 +      2932 T
i Zalophus_californianus.ZalCal_flattened_line_63728     I 19 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      10291 1 +     63895 T
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 25 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11743 1 +     12536 T
i Ziphius_cavirostris.ZipCav_flattened_line_71469        I 19 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906 0 -     10935 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   51836 81 -     77625 I
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103743 25 +    114563 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    151651 18 -    313613 I
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Procavia_capensis.ProCapCap_scaffold_85530                 10240 0 -     22811 C
e Petromus_typicus.PetTyp_scaffold_42190                     26608 25 -     29689 I
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Loxodonta_africana.GL010049.1                            4214777 0 -  43346337 C
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20330 28 -    143317 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491 0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20659857 22 +  22651954 I
e Galagoides_demidoff.k141_31856                              3217 0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089268 0 +  10337057 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 31954 28 -     42551 I
e Dinomys_branickii.DinBra_scaffold_21862                    34767 28 +     67921 I
e Dasyprocta_punctata.DasPun_flattened_line_102822            8530 59 +     10433 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3357 25 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Condylura_cristata.JH655891.1                           17546594 17 -  53390261 I
e Chinchilla_lanigera.JH722012.1                           1251282 28 +   2543920 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99076 30 +    143979 I
e Cavia_porcellus.DS562891.1                              18360202 30 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18347942 30 -  23392119 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1947 14 +     62944 TTGCT----GT----G--G-------TTAT-G
s Acinonyx_jubatus.LLWD01001279.1                           823583 14 -   1699592 TTGCT----AT----G--G-------TTAT-G
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507304 14 -  29979442 TTGCT----AT----G--G-------TTAT-G
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             75903 14 -    347723 TTGCT----AT----A--G-------CTAT-A
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     65287  8 -     89534 ----------T----A--G-------CTAA-A
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9927 14 -     52922 TTGCT----GT----G--A-------CTGT-G
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9858 14 -     28001 TTGCT----GT----G--A-------CTGT-G
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                           304 14 -     18505 TTGCT----GT----G--A-------CTGT-G
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           1153 14 -     12518 TTGCT----GT----G--A-------CTGT-G
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675682 14 -   2318259 ATGCT----AT----G--A-------TCAT-G
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183413 14 +    412891 TTGCT----AT----G--G-------TCAT-G
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             98164 14 -    100397 TTGCT----AT----G--A-------TCAC-G
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7590  8 +     20879 ----------T----A--A-------TTAT-C
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 6 C 0
s Arctocebus_calabarensis.k141_288239                        14743 14 +     17124 TTGCT----GT----G--A-------TTGT-G
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2770 14 +     43469 TTGCT----AT----G--G-------TCAC-G
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  49620 14 -     92717 TTGCT----GC----G--G-------TTAC-A
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              50245 14 +     85213 TTGCT----GC----G--G-------TTAC-A
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191909 14 +  23207421 TTGCC----AT----G--G-------TCAT-G
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2374 14 -     18090 TTGCC----AT----G--G-------TCAT-G
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26604 14 +     34529 ATGCT----AT----G--A-------TCAT-G
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    199661 14 -    288883 ATGCT----AT----G--A-------TCAT-G
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20272866 14 +  48749331 ATGCT----AT----G--A-------TCAN-G
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1125422 14 -   1948126 ATGCT----AT----G--A-------TCAT-G
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18083504 14 +  45695690 ATGCT----AT----G--A-------TCAT-G
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2819171 14 +   4408762 ATGCT----AT----G--A-------TCAT-G
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9999242 14 -  17673402 TTGCT----AT----G--G-------TCAT-G
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331706 14 -   7040546 TTGCT----AT----G--G-------TCAT-G
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399982 14 -   1652518 TTGCT----AT----G--G-------TCAT-G
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17796075 14 -  60362399 TTGCT----AT----G--G-------TTAT-G
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182132 14 -    185531 TTGCT----AT----G--G-------TTAT-G
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031518 14 -   9314153 TTGCT----AT----G--G-------TTAT-G
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955783 14 -  59632846 TTGCT----AT----G--G-------TTAT-G
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18497083 14 +  63665305 TTGCT----AT----G--G-------TTAT-G
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18829800 14 +  46296322 ATGCT----AT----G--A-------TCAT-G
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18060520 14 -  44709034 ATGCT----AT----G--A-------TCAT-G
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           141364 14 -    496798 TGGCT----GT----G--G-------TTAT-G
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                3187 14 -     11696 TTGCT----AT----G--G-------TCAC-G
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133959  5 +    179628 ----------T----A--T-------C----T
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89562 14 +    217609 TTGCT----TT----G--G-------TCAT-G
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18347972  6 -  23392119 ------------------G-------TTAT-A
i Cavia_aperea.AVPZ01000300.1                            I 30 C 0
s Cavia_porcellus.DS562891.1                              18360232  6 -  23407841 ------------------G-------TTAT-A
i Cavia_porcellus.DS562891.1                             I 30 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        99106  6 +    143979 ------------------G-------TTAT-A
i Cavia_tschudii.CavTsc_scaffold_8919                    I 30 C 0
s Cephalopachus_bancanus.k141_2037105                         5279 14 -      8605 TGACT----GT----G--G-------TTAT-G
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12228200 14 +  27778364 TTGCT----AT----G--G-------TCAC-G
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2918 14 -      3715 TTGCT----AT----G--G-------TCAC-G
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470887 14 +   4669795 TTGCT----GT----G--A-------CTGT-G
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         9436 14 -     19203 TTGCT----GT----G--A-------CTGT-G
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3857 14 +      8260 TTGCT----GT----G--A-------CGGT-G
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           4085 14 +     27781 TTGCT----GT----G--A-------CTGT-G
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         4243 14 -     20310 TTGCT----GT----G--A-------CTGT-G
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           7227 14 +     29689 TTGCT----GT----G--A-------CTGT-G
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            1665 14 +      9989 TTGCT----GT----G--A-------CTGT-G
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9911 14 -     27936 TTGCT----GT----G--A-------CTGT-G
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9937 14 -     11289 TTGCT----GT----G--A-------CTGT-G
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38812309 14 +  39242232 TTGCT----GT----G--A-------CTGT-G
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21218008 14 -  21565898 TTGCT----GT----G--A-------CTGT-G
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       35127 14 -     53127 TTGCT----GT----G--A-------CTGT-G
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        2412 14 +      7159 TTGCT----GT----G--A-------CTGT-G
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9930 14 -     27947 TTGCT----GT----G--A-------CTGT-G
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9906 14 +     17596 TTGCT----GT----G--A-------CTGT-G
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         40406 14 -     41420 TTGCT----GT----G--A-------CTGT-G
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            5096 14 -      6351 TTGTT----AT----G--G-------TTAT-A
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             17036 14 -     52598 TTGCT----GC----A--G-------TTAC-A
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12386 14 +     57038 TTGCT----GC----A--G-------TTAC-A
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1251310  6 +   2543920 ------------------G-------TTAT-A
i Chinchilla_lanigera.JH722012.1                         I 28 C 0
s Chlorocebus_aethiops.ctg25                              18423869 14 -  18827391 TTGCT----GT----G--A-------CTGT-G
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       10310 14 -     50209 TTGCT----GT----G--A-------CTGT-G
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135417318 14 + 135778131 TTGCT----GT----G--A-------CTGT-G
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15475 14 +     19366 TTGTT----AT----A--A-------TTAT-G
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170574 14 +    839153 TTGTT----AT----A--A-------TTAT-G
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1905844 14 +   2368649 TTGCT----GT----G--A-------CTGT-G
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199945514 14 + 200372422 TTGCT----GT----G--G-------CTGT-G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              32385 14 +     84244 TTGCT----GT----G--G-------CTGT-G
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17546611 11 -  53390261 ---TT----AT----G--A-------CCAC-A
i Condylura_cristata.JH655891.1                          I 17 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10827 14 -     20389 TTGCT----AT----G--T-------TCAT-G
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_287352               832 15 +      4208 TTGAT----AT----G--G-------TCATTG
i Crocidura_indochinensis.CroInd_scaffold_287352         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24532 14 -     87169 TTGCC----AT----G--G-------TTAT-A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 3382  5 +      5455 ------------------A-------TTGT--
i Cuniculus_paca.CunPac_flattened_line_231100            I 25 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1734  6 +      3576 ------------------G-------TTAT-A
i Dasyprocta_punctata.DasPun_flattened_line_206793       I 59 C 0
s Dasypus_novemcinctus.JH564415.1                            61366 14 +   2246927 TTGTT----AT----A--G-------TTAT-G
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12533207 14 -  12879189 TTGCT----GT----G--G-------TTAC-A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811544 14 +  35494412 TTGCC----AT----G--C-------TCAT-G
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8628219 14 +  20541912 TTGCT----GT----G--G-------TCAC-A
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  670050 14 +   1390856 TTGCT----AT----G--G-------TCAC-G
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2808 14 +    198055 ttgct----at----g--g-------tcat-g
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34795  6 +     67921 ------------------G-------TTGT-A
i Dinomys_branickii.DinBra_scaffold_21862                I 28 C 0
s Dipodomys_ordii.KN672350.1                              18896112 14 +  37912305 ----------TTCTTG--TAC-----TTCC-A
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  12330 14 +     14536 ----------TTCTTG--TAC-----TTGC-A
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31982  6 -     42551 ------------------G-------TTAT-A
i Dolichotis_patagonum.DolPat_scaffold_30833             I 28 C 0
s Eidolon_helvum.KE759718.1                                   7732 14 +     11740 TTGCT----AT----G--G-------TCAT-G
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310835 14 +    607251 TTGCT----AT----G--A-------TCAT-G
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Enhydra_lutris.KZ291758.1                               16326090 14 -  41312741 TTGCT----AT----G--G-------TTAT-A
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144374 14 -  14770903 ttgct----gt----G--G-------TAAT-G
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1280087 14 +   4378816 TTGCT----AC----G--G-------ACAC-G
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527908 14 -  39960074 TTGCT----AC----G--G-------ACAC-G
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29923 14 +    498745 TTGCT----AC----G--G-------ACAC-G
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3325622 13 -   7059049 TTGCT----AT----G--T-------TA--TG
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21200500 14 -  21539334 TTGCT----GT----G--A-------CTGT-G
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11220 14 +    133382 TTGCC----AT----G--G-------TCAT-G
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             25157 14 -     44125 TTGCC----AT----G--G-------TCAT-G
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Eulemur_albifrons.k141_342033                               9716 14 -     14127 TTGGT----GC----A--G-------TTAC-A
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                2414 14 -     16928 TTGGT----GC----A--G-------TTAC-A
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              11447 14 -     25546 TTGGT----GC----A--G-------TTAC-A
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             8632 14 +     26330 TTGGT----GC----A--G-------TTAC-A
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                  9889 14 +     23973 TTGGT----GC----A--G-------TTAC-A
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 8632 14 +     75513 TTGGT----GC----A--G-------TTAC-A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  6584 14 +     97555 TTGGT----GC----A--G-------TTAC-A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                             9510 14 +     26496 TTGGT----GC----A--G-------TTAC-A
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_754848                                  18801 14 +     18826 TTGGT----GC----A--G-------TTAC-A
i Eulemur_rufus.k141_754848                              C 0 N 0
s Eulemur_sanfordi.k141_1122526                               9695 14 +    111500 TTGGT----GC----A--G-------TTAC-A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20233453 14 + 206538554 TTGCT----AT----G--G-------TTAT-G
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20192283 14 + 205367284 TTGCT----AT----G--G-------TTAT-G
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  5808 14 -     36744 TTGCT----AT----G--G-------TTAT-G
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25772 14 +     26054 TTGCT----GT----G--G-------TTGT-G
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     608800 14 -    660261 TTGCT----AT----G--A-------TCAT-G
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30662  8 +     49224 ----------T----A--G-------TCAT-G
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_2022027                               2602 14 +      3305 TTGCT----GT----G--G-------TTAT-G
i Gorilla_beringei.k141_2022027                          I 1 I 37
s Gorilla_gorilla.LT578341.1                             186333330 14 + 186649187 TTGCT----GT----G--G-------TTAT-G
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   30386  8 +     78134 ----------T----A--G-------TCAT-G
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           2781 14 -     19426 TTGGT----GC----A--G-------TTAC-A
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              7925 14 -     15286 TTGGT----GC----A--G-------TTAC-A
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                              9563 14 +     18253 TTGGT----GC----A--G-------TTAC-A
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                          9666 14 -     41752 TTGGT----GC----A--G-------TTAC-A
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                          9499 14 -     16460 TTGGT----GC----A--G-------TTAC-A
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238446 14 +    327341 TTGCC----AT----G--G-------TTAT-A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18004 14 +     36099 ATGCT----AT----G--A-------TCAT-G
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20659879  6 +  22651954 ------------------G-------TTAT-A
i Heterocephalus_glaber.JH602082.1                       I 22 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112357 14 +    128679 TTGCC----AT----G--G-------TCAT-G
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108601 14 +   1711038 TTGCT----AT----G--G-------TCAG-G
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               40042 14 +     43066 TTGCT----GT----G--G-------TCAG-G
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    430077 14 +    630532 TTGCT----GT----G--G-------TTAT-G
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40921 14 +     55795 TTGCT----AT----G--G-------TTGT-A
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20358  6 -    143317 ------------------G-------TTAT-A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 28 C 0
s Hylobates_agilis.k141_307679                               13008 14 -     15490 TTGCT----GT----G--G-------TTAT-G
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              55013 14 +     67168 TTGCT----GT----G--G-------TTAT-G
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189538663 14 - 191637585 TTGCT----GT----G--G-------TTAT-G
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3331556 14 -  11177569 TTGCT----GT----G--G-------TTAT-G
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      81450 10 +    135385 ----------T----ATCG-------TTAT-A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514910  8 -   7955117 ----------T----T--G-------TTAT-C
i Ictidomys_tridecemlineatus.JH393364.1                  I 6 C 0
s Indri_indri.k141_3655594                                   18482 14 +     31101 TTGCT----GC----G--G-------TTAC-A
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22761 14 +     23964 TTGCC----AT----G--G-------TCAT-G
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271677  8 -   9596543 ----------T----A--G-------CTAA-A
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                2123 14 -      3359 TCGCC----AT----G--G-------TCAT-G
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    12795 18 -     42476 TTGCTATCTAT----G--G-------TCAT-G
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15520025 14 -  30322482 TTGGT----GC----A--G-------TTAC-A
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6937 14 -     23766 TTACT----GA----A--G-------TTAC-A
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24884 14 +     45836 TTACT----GA----A--G-------TTAC-A
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31797 14 -     32627 TTACT----GC----A--G-------TTAC-A
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      22939 14 +     54090 TTACT----GA----A--G-------TTAC-A
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3036424 14 +   3914936 TTGTT----AT----G--G-------TTAT-G
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             267813 14 -    662738 TTGCC----AT----G--G-------TCAT-G
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1432431 14 +   1826925 TTGCT----GT----G--A-------CTGT-G
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            1004 14 +     11245 TTGCT----GT----G--A-------TTGT-C
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999841 14 +   6120653 TTGCT----GT----G--A-------TTGT-C
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17952023 14 -  59628241 ttGCT----AT----G--G-------TTAT-G
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               2252 14 +     40492 TTGCT----GT----G--A-------CTGT-G
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59671507 14 +  60120075 TTGCT----GT----G--A-------CTGT-G
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  8007 14 -     26193 TTGCT----GT----G--A-------CTGT-G
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75804 14 -    114318 TTGCT----GT----G--A-------CTGT-G
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  1519 14 -     23192 TTGCT----GT----G--A-------CTGT-G
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10972 14 -     29190 TTGCT----GT----G--A-------CTGT-G
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  19539 14 +     37952 TTGCT----GT----G--A-------CTGT-G
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834627 14 + 187317192 TTGCT----GT----G--A-------CTGT-G
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25453190 14 -  25927173 TTGCT----GT----G--A-------CTGT-G
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  75388 14 +     89720 TTGCT----GT----G--A-------CTGT-G
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 2386 14 +     20474 TTGCT----GT----G--A-------CTGT-G
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   2187 14 -     14993 TTGCT----GT----G--A-------CTGT-G
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  325059 14 -    668171 TTGCT----GT----G--A-------CTGT-G
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                  490 14 -     24072 TTGCT----GT----G--A-------CTGT-G
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               21126 14 -     45290 TTGCT----GT----G--A-------CTGT-G
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87838 14 +     94391 TTGCT----AT----G--G-------TCAT-G
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23932675 14 -  24302211 TTGCT----GT----G--A-------CTGT-G
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346852 14 +    752769 TTGCT----GT----G--A-------CTGT-G
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15910 14 +    737560 TTGCC----AT----A--G-------TTAC-A
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              47299 14 -    317179 TTGCC----AT----A--G-------TTAC-A
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097760  8 -  40650429 ----------T----T--G-------TTAT-C
i Marmota_marmota.CZRN01000018.1                         I 6 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         7108 14 -    207569 TTACT----AT----G--G-------TCAT-G
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6803 14 +     13704 TTGCT----AT----G--G-------TTAT-A
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3429 14 +     10310 TTGCC----AT----G--G-------TCAT-G
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18287421 14 -  93316391 TTGCT----GC----A--G-------TTAC-A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13730 14 -     19307 TTGCT----AT----G--G-------TCAT-G
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849621 14 +   8254450 TTGCT----AT----G--G-------TCAT-G
i Miniopterus_natalensis.LDJU01000034.1                  I 199 T 200
s Miniopterus_schreibersii.MinSch_scaffold_18080             33298 14 +     64694 TTGCT----AT----G--G-------TCAT-G
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           4425 14 -     28506 TTGCT----GT----G--A-------CTGT-G
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62754 14 -     63350 TTGTT----AT----G--G-------TTAT-G
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      4989 14 -     37649 TTGCT----GC----A--G-------TTAC-A
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26934 14 -    437263 TTGCC----AT----G--C-------TCAT-G
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138134 14 -    366855 TGGCT----AT----G--G-------TCAT-G
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                    886 14 +     82753 TTGCT----AT----G--A-------TCAT-G
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31654 14 +     37127 TTGCC----AT----G--G-------TTAT-A
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5446 14 +     14753 TTGCT----AT----G--G-------TCAT-G
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2655  8 +     14296 ----------T----A--G-------TCAT-A
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               297988 14 -  14710649 TCGCT----AT----G--G-------TTCT-A
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                278618 14 -  10118263 TTGCT----AT----G--G-------TCAT-G
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1586173 14 -   6019432 ttgct----at----g--g-------tCAT-G
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902382 14 -   4330536 TTGCT----AT----G--G-------TCAT-G
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32942 14 +     33610 TTGCT----AT----G--G-------TTAT-G
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186426 14 +    196477 TTGTT----AT----G--G-------TTAC-A
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025817  8 -   3037898 ----------T----A--G-------CTGA-A
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               10425 14 +     21681 TTGCT----GT----G--A-------CTGT-G
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865890 14 +   7148211 TTGCC----AT----G--G-------TCAT-G
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756693 14 +    783361 TTGCT----AT----G--G-------TCAG-G
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146284 14 -   9404916 TTGCT----AT----G--G-------TTAT-G
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102574804 14 - 196305487 TTGCT----AT----G--A-------TTGT-C
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2490 14 +      8486 TTGCT----AT----G--A-------TTGT-C
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105745231 14 + 199412804 TTGCT----AT----G--A-------TTGT-C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1358961  8 +   3988456 ----------T----G--G-------TTAC-A
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              501041 14 -   2017862 TTGTT----AT----G--G-------TTAT-G
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         145206 14 +    630418 TTGCT----AT----G--A-------TCAT-G
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          76717 14 -    150152 TTGTT----AT----G--A-------TCAT-G
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  2781805 14 -  10937097 TTGCC----AT----G--G-------TCAT-G
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       459037 14 -    559221 TTGCT----AT----G--G-------TTAT-G
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17585979 14 +  44047080 ATGCT----AT----G--A-------TCAT-G
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173956 14 -    191736 ATGCT----AT----G--A-------TCAT-G
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    39299 14 +     80009 TTGCT----GT----G--G-------TTAT-G
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03001836.1                             25216 14 +     51860 TTGCT----GT----G--G-------TTAT-G
i Pan_troglodytes.NBAG03001836.1                         C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  147433 14 +    230217 TTGCT----AT----G--G-------TTAT-G
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                260142 14 +  18783137 TTGCT----AT----G--G-------TTAT-G
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4717289 14 -   8748460 TTGCT----AT----G--G-------TTAT-G
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1264889 14 -   2937107 GTGCT----AT----G--A-------TCAT-G
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183438460 14 + 183742232 TTGCT----GT----G--A-------CTGT-G
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             2153 14 +     20448 TTGCT----GT----G--A-------CTGT-G
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20558958 14 +  20919399 TTGCT----GT----G--A-------CTGT-G
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                    896 14 +     41871 TTGCT----GT----G--A-------CTGT-G
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     4182 14 +     27711 TTGCT----GT----G--A-------CTGT-G
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  4267 14 +      9205 TTGCT----GT----G--A-------CTGT-G
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9170 14 -     78924 TTGCT----AT----G--A-------TTAT-G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            4979 14 +     13100 TTGCT----GT----G--A-------TTGT-G
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             3347 14 +     25941 TTGCT----GT----G--A-------TTGT-G
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25590 14 +     32600 ----------TTTTTG--TAC-----TTGC-A
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     26633  6 -     29689 ------------------G-------TTTT-A
i Petromus_typicus.PetTyp_scaffold_42190                 I 25 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8852 14 +     63832 TTGCC----AT----G--G-------TCAT-G
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38937 14 +     62158 TTGCT----GT----G--A-------CTGT-G
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33659 14 +     89929 TTGCT----GT----G--A-------CTGT-G
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            35075 14 +     51399 TTGCT----GT----G--A-------CTGT-G
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14291311 14 -  14605196 TTGCT----GT----G--A-------CTGT-G
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              752 14 +     22620 TTGCT----GT----G--A-------TCAT-G
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34558 14 +     35617 TTGCC----CT----G--G-------TCAT-G
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189126380 21 + 189387572 TTACT----GT----G--GCCTGTGGCTAA-G
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9565986 21 +   9816681 TTACT----GT----G--GCCTGTGGCTAA-G
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68586 14 -     81375 TTGCT----GT----G--A-------CTGT-G
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                               407 14 +     19060 TTGCT----GT----G--A-------CTGT-G
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2592678 14 -   4620579 TTGGT----GC----A--G-------TTAC-A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986691 14 +   2598838 TTGCT----GT----G--G-------TTAC-A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          24980 14 +     38485 TTGCT----GT----G--G-------TTAC-A
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             1141 14 +      4256 TTGCT----GT----G--G-------TTAC-A
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22499 14 +     35766 TTGCT----GT----G--G-------TTAC-A
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            682 14 -     24134 TTGCT----GT----G--G-------TTAC-A
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24494 14 -     67325 TTGCT----GT----G--G-------TTAC-A
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            739 14 -      6182 TTGCT----GT----G--G-------TTAC-A
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11527 14 -     21811 ttgca----aT----G--G-------TCAT-G
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         36999 14 +     42204 TTGCT----AT----G--G-------TTAT-A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22974000 14 +  28871421 TTGCT----AT----G--G-------TCAT-G
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1938 14 -      8028 TTGCT----AT----G--G-------TCAT-G
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20270597 14 -  38429054 TTGCT----AT----G--G-------TTAT-G
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             10418 14 -     91421 TTGCT----GT----G--A-------CTGT-G
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7604546 14 +   7812017 TTGCC----GT----G--A-------CTGT-G
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10387 14 -     72585 TTGCC----GT----G--A-------CTGT-G
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5454 14 +     55207 TTGCT----AT----G--A-------TCAT-G
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        367148 14 -   3329780 TTGCT----AT----G--A-------TCAT-A
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             2102 14 -     11128 TTGCT----GT----G--A-------CTGT-G
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91231457 14 - 195417433 TTGCT----GT----G--A-------CTGT-G
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7667106 14 +   7961872 TTGCT----GT----G--A-------CTGT-G
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84985 14 -     96226 TTGCT----AT----G--G-------TCAT-G
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       4073 14 +      4321 ATGCT----AT----G--A-------Tcat-t
i Saiga_tatarica.SaiTat_scaffold_373180                  C 0 I 100
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151669 11 -    313613 ---TT----AT----G--G-------TTGC-A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 18 C 0
s Semnopithecus_entellus.k141_11662                          14930 14 -     19888 TTGCT----GT----G--A-------CTGT-G
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      22132 14 +     39453 TTGCT----GT----G--A-------CTGT-G
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2658 14 +     27826 TTGCT----GT----G--A-------CTGT-G
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             2179 14 -     19483 TTGCT----GT----G--A-------CTGT-G
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      2241 14 +      7198 TTGCT----GT----G--A-------CTGT-G
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         10501 14 +     15514 TTGCT----GT----G--G-------CTGT-G
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            187987 14 -    191337 CTACT----AT----G--G-------TCTT-T
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13648162 13 -  18376816 TTGAT----AT----T--G-------TCAT--
i Sorex_araneus.JH798187.1                               C 0 I 1
s Spermophilus_dauricus.KZ294078.1                         1948548  8 -   3870691 ----------T----T--G-------TTAT-C
i Spermophilus_dauricus.KZ294078.1                       I 6 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27533 14 +     97271 TTGCT----AT----G--G-------CTAT-A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14528 14 -    196729 TTGCC----AT----G--G-------TTAT-A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   62882780 14 -  69701581 ttgct----tt----g--g-------ttaT-G
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1088707 14 -   1523678 TTGCT----GT----G--G-------TTAT-G
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 7139 14 +     41958 TTGTG----GT----G--G-------TCGC-G
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69780 14 +    116680 TTGTT----AT----G--G-------TTAC-A
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115530 14 -    156842 TTGCT----AT----G--G-------TCAT-G
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383984 14 +    539355 TTGCT----AT----G--G-------TCAT-G
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10978 14 +     70052 TTGCT----GT----G--G-------TTAT-G
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               15283 14 +     25099 TTGCT----GT----G--G-------TTAT-G
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186423504 14 + 186847797 TTGCT----GT----G--A-------CTGT-G
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103768  6 +    114563 ------------------A-------TTAT-A
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 25 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   2157 14 +      8208 TTGTT----AT----G--G-------TTAT-G
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     79275 14 +    610378 TTGCT----AT----G--G-------TCAC-G
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          6232 14 -     20410 TTGCT----GT----G--A-------CTGT-G
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    10428 14 +     15221 TTGCT----GT----G--A-------CTGT-G
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        6333 14 +     19930 TTGCT----GT----G--A-------CTGT-G
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2763 14 -     19997 TTGCT----GT----G--A-------CTGT-G
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42882 14 -     60166 TTGCT----GT----G--A-------CTGT-G
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        10355 14 -     27529 TTGCT----GT----G--A-------CTGT-G
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     10295 14 -     18194 TTGCT----GT----G--A-------CTGT-G
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           4030 14 -     21137 TTGCT----GT----G--A-------CTGT-G
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2733 14 -     10723 TTGCT----GT----G--A-------CTGT-G
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1885 14 +      9834 TTGCT----GT----G--A-------CTGT-G
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        20203 14 +     32220 TTGCT----GT----G--A-------CTGT-G
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5934300 14 +   6242583 TTGCT----GT----G--A-------CTGT-G
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        3547 14 +     20839 TTGCT----GT----G--A-------CTGT-G
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_124071                   1543 14 -      2171 TTGTT----AT----G--G-------TCAT-A
i Tragulus_javanicus.TraJav_scaffold_124071              I 486 I 139
s Tupaia_chinensis.KB320699.1                              2150727 14 +   4065304 TTGCT----GT----G--T-------TTCT-A
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     4025 14 -     10553 TTGCT----GT----G--T-------TTCT-A
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15738052 14 +  33153633 TTGCC----AT----G--G-------TCAT-G
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_97021                    2229 12 -      4736 ---TT----AT----G--G-------TCATGG
i Uropsilus_gracilis.UroGra_scaffold_97021               I 48 C 0
s Ursus_maritimus.KK499267.1                               4847241 14 -   5085361 ttgct----AT----G--G-------TTAT-G
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   7366 14 +     50397 TTGCT----GC----A--G-------TTAC-A
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              7414 14 +     24756 TTGCT----GC----A--G-------TTAC-A
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368733 14 -   5488506 TTGCT----GT----G--G-------TCAT-G
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7698 14 -     43706 TTGCT----AT----G--G-------TTAT-G
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        20050  8 -     24430 ----------T----A--G-------TTAT-C
i Xerus_inauris.XerIna_scaffold_48378                    I 6 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          2163 14 +      2932 TTGTT----AC----G--G-------TTAT-G
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      10292  8 +     63895 ----------T----T--T-------TTAA-A
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 529
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11744 14 +     12536 TTGCC----AT----G--G-------TCAT-G
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Galagoides_demidoff.k141_31856                              3217  0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1961 24 +     62944 CAGA-CTTG----TTCTCTGTGCAC-TAA----------------------A
s Acinonyx_jubatus.LLWD01001279.1                           823597 24 -   1699592 TAGA-CTTG----CCCTCTATGTAc-tca----------------------a
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 295
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507318 46 -  29979442 TACA-TTTG----GCCTCTATgcac-tgaagtttttttttttttgcactgaa
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             75917 24 -    347723 CAGA-GTTG----GCCTCTATGCAC-TGA----------------------A
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     65295 23 -     89534 TAGA--TTG----TCCTCAATGCAC-TGA----------------------A
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9941 24 -     52922 CGGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9872 24 -     28001 CGGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                           318 24 -     18505 AGGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           1167 24 -     12518 AGGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675696 23 -   2318259 TGGA-CTTT----GTCTCTATGTTC-TAA-----------------------
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183427 24 +    412891 TGAA-CTTT----GTCTCTATGCAT-TAA----------------------A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             98178 23 -    100397 TAGA-CTTT----GTCTCTATGTTC-TAA-----------------------
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7598 24 +     20879 TAGA-TTTG----TCCTCTGTGCAG-TAA----------------------A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14757 24 +     17124 TAGA-CTCG----TTCTCTATGCAC-CAA----------------------A
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2784 24 +     43469 TAAA-CTTT----GTCTCTATGTAT-CAA----------------------A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  49634 24 -     92717 TAGA-CTTC----TTCTCTATGCGC-TAA----------------------C
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              50259 24 +     85213 TAGA-CTTC----TTCTCTATGCGC-TAA----------------------C
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191923 24 +  23207421 GAGA-CTTG----GTCTCTATGTTC-TAA----------------------A
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2388 24 -     18090 GAGA-CTTG----GTCTCTATGTTC-TAA----------------------A
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26618 23 +     34529 TAGA-CTTT----GTCTCTGTGTTC-TAA-----------------------
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    199675 23 -    288883 TAGA-CTTT----GTCTCTATGTTA-CAA-----------------------
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20272880 23 +  48749331 TAGA-CTTT----GTCTCTATGTTA-CAA-----------------------
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1125436 23 -   1948126 TAGA-CTTT----GTCTCTATGTTA-CAA-----------------------
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18083518 23 +  45695690 TAGA-CTTT----GTCTCTATGTTA-CAA-----------------------
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2819185 23 +   4408762 TAGA-CTTT----GTCTCTATGTTC-TAA-----------------------
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9999256  8 -  17673402 TAGA-CTTG-------------------------------------------
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331720  8 -   7040546 TAGA-CTTG-------------------------------------------
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  399996  8 -   1652518 TAGA-CTTG-------------------------------------------
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17796089 24 -  60362399 TAGA-CTTG----GCCTCTATGCAC-TGA----------------------A
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182146 24 -    185531 TAGA-CTTG----GCCTCTATGCAC-TGA----------------------A
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031532 24 -   9314153 TAGA-CTTG----GCCTCTATGCAC-Tga----------------------a
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955797 24 -  59632846 TAGA-CTTG----GCCTCTATGCAC-Tga----------------------a
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18497097 24 +  63665305 TAGA-CTTG----GCCTCTATGCAC-Tga----------------------a
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18829814 23 +  46296322 TGGA-CTTT----GTCTCTATGTTC-TAA-----------------------
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18060534 23 -  44709034 TAGA-CTTT----GTCTCTATGTTC-TAA-----------------------
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           141378 24 -    496798 TAGA-CTTG----TTCTCTGTGCAC-TAA----------------------A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                3201 24 -     11696 TAAA-CTTT----GTCTCTATGTAC-TAA----------------------A
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133964 24 +    179628 TAGA-CTTA----TCCTCCATGCAC-TAA----------------------A
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89576 24 +    217609 TAGA-CTTG----GTCTCTACGCTC-TAG----------------------G
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18347978 24 -  23392119 CAGG-TATG----CCTTTTATGCAC-TAA----------------------A
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18360238 24 -  23407841 CAGG-TATG----CCTTTTATGCAC-TAA----------------------A
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        99112 24 +    143979 CAGG-TTTG----CCTTTTATGCAC-TAA----------------------A
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         5293 24 -      8605 TAGA-CTTG----TTCTCTGTGCAC-TAA----------------------A
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12228214 24 +  27778364 TAGA-CTTG----GTCTCTACGCAC-TAA----------------------A
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2932 24 -      3715 TAGA-CTTG----GTCTCTACGCAC-TAA----------------------A
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470901 24 +   4669795 CGGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         9450 24 -     19203 TGGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3871 24 +      8260 CGGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           4099 24 +     27781 TGGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         4257 24 -     20310 CGGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           7241 24 +     29689 CGGA-CTTG----CTTTCTGTGCAC-TAA----------------------A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            1679 24 +      9989 CGGA-CTTG----CTGTCTGTGCAC-TAA----------------------A
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9925 24 -     27936 CGGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9951 24 -     11289 CGGA-CTTG----CTATCTGTGCAC-TAA----------------------C
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38812323 24 +  39242232 CAGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21218022 24 -  21565898 CGGA-CTTG----CTGTCTGTGCAC-TAA----------------------C
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       35141 24 -     53127 CGGA-CTTG----CTGTCTGTGCAC-TAA----------------------C
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        2426 24 +      7159 CGGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9944 24 -     27947 CGGA-CTTG----CTGTCTGTGCAC-TAA----------------------C
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9920 24 +     17596 CGGA-CTTG----CTGTCTGTGCAC-TAA----------------------C
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         40420 24 -     41420 CGGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            5110 25 -      6351 TGGA-CTTG----GTCTCTATGCACTCAA----------------------A
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             17050 24 -     52598 TGGA-CTTG----TTCTCTATGCGC-TAA----------------------T
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12400 24 +     57038 TGGA-CTTG----TTCTCTATGCAC-TAA----------------------T
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1251316 24 +   2543920 TAGA-TTTG----TTTTTTATGCAC-TAA----------------------A
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18423883 24 -  18827391 CGGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       10324 24 -     50209 CGGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135417332 24 + 135778131 CGGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15489 24 +     19366 CAAA-CTTG----GTCTCTAGGTAC-CAA----------------------A
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170588 24 +    839153 CAAA-CTTG----GTCTCTAGGTAC-Caa----------------------a
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1905858 24 +   2368649 TGGA-CTTG----CTCTCTGTGCAC-TCA----------------------A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199945528 24 + 200372422 TGGA-CTTG----CTCTCTGTGCAC-TCA----------------------A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              32399 24 +     84244 TGGA-CTTG----CTCTCTGTGCAC-TCA----------------------A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17546622 23 -  53390261 TAGA-T-TG----TTCTCCAAGCAT-GAa----------------------a
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10841 24 -     20389 TAGA-CTTG----GTCTCTATGCAC-TAA----------------------A
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_287352               847 21 +      4208 TAGA-CTTGGTTGGTGACTAAG------------------------------
i Crocidura_indochinensis.CroInd_scaffold_287352         C 0 I 9
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24546 24 -     87169 TAGA-CTTG----GCCTCTATGCAC-TGA----------------------A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 241
s Cuniculus_paca.CunPac_flattened_line_231100                 3387 24 +      5455 TAGA-GTTG----CCTTTTATGCAC-TAA----------------------A
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1740 24 +      3576 TAGA-TTCG----CCTTTCATGCAC-TAA----------------------A
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            61380 24 +   2246927 TGGA-TTTG----GCCTCTATGCAC-CAA----------------------A
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12533221 24 -  12879189 TAGA-CTAG----TTCTCTATGCAC-TAA----------------------A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811558 24 +  35494412 GAGA-CTTG----GTCTCTATGTTC-TAA----------------------A
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8628233 24 +  20541912 TAAA-CTTT----GTCTCTATGCAT-TAA----------------------A
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  670064 22 +   1390856 TAGA-G-TG----GTCTCTACGCAC-TA-----------------------A
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2822 24 +    198055 taga-cTTG----GTCTCTACGCAC-TAA----------------------A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34801 24 +     67921 TAGA-TTTG----TCTTTCATGCAT-TAA----------------------A
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18896126 24 +  37912305 CAGA-CTTA----TCCTCCATATAC-TGA----------------------A
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  12344 24 +     14536 CAAA-CTTA----TCCTCCATATAC-TGA----------------------A
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 31988 24 -     42551 CAAG-TTTG----CCTCTTTTGCGC-TAA----------------------A
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE759718.1                                   7746 24 +     11740 AAGA-CTTG----GTCTCTATGCAC-TAA----------------------a
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310849 23 +    607251 TAGA-CTTT----GTCTCTATGTTC-TAA-----------------------
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Enhydra_lutris.KZ291758.1                               16326104 24 -  41312741 TAAA-CTTG----GCCTCTATGCAC-TGA----------------------A
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144388 24 -  14770903 TAAA-CTTT----TCCTCTGTGCAC-TAA----------------------A
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1280101 24 +   4378816 TAGA-CTTG----GTGTCTATGCAC-TAC----------------------A
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527922 24 -  39960074 TAGA-CTTG----GTGTCTATGCAC-TAC----------------------A
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29937 24 +    498745 TAGA-CTTG----GTGTCTATGCAC-TAC----------------------A
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3325635 23 -   7059049 TGGA-CGTG----GC-ACCATCTAC-TAA----------------------A
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21200514 24 -  21539334 CGGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11234 24 +    133382 GAGA-CTTG----GTCTCTATGTTC-TAA----------------------A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             25171 24 -     44125 GAGA-CTTG----GTCTCTATGTTC-TAA----------------------A
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Eulemur_albifrons.k141_342033                               9730 25 -     14127 TAGAATTTG----TTCTCTATGCAC-TAA----------------------T
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                2428 25 -     16928 TAGAATTTG----TTCTCTATGCAC-TAA----------------------T
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              11461 25 -     25546 TAGAATTTG----TTCTCTATGCAC-TAA----------------------T
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             8646 25 +     26330 TAGAATTTG----TTCTCTATGCAC-TAA----------------------T
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                  9903 25 +     23973 CAGAATTTG----TTCTCTATGCAC-TAA----------------------T
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 8646 25 +     75513 TAGAATTTG----TTCTCTATGCAC-TAA----------------------T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  6598 25 +     97555 TAGAATTTG----TTCTCTATGCAC-TAA----------------------T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                             9524 25 +     26496 TAGAATTTG----TTCTCTATGCAC-TAA----------------------T
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                   130 25 -     17153 TAGAATTTG----TTCTCTATGCAC-TAA----------------------T
i Eulemur_rufus.k141_1476633                             N 0 C 0
s Eulemur_sanfordi.k141_1122526                               9709 25 +    111500 TAGAATTTG----TTCTCTGTGCAC-TAA----------------------T
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20233467 24 + 206538554 TAGA-CTTG----CCCTCTATGTac-tca----------------------g
i Felis_catus.CM001381.2                                 C 0 I 279
s Felis_catus_fca126.CM031415.1                           20192297 24 + 205367284 TAGA-CTTG----CCCTCTATGTAc-tca----------------------a
i Felis_catus_fca126.CM031415.1                          C 0 I 297
s Felis_nigripes.FelNig_flattened_line_20823                  5822 24 -     36744 TAGA-CTTG----CCCTCTATGTAC-TCa----------------------a
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 283
s Galeopterus_variegatus.GalVar_scaffold_56069               25786 24 +     26054 TAGA-CTTG----TTCTCTATGCAC-TAA----------------------A
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     608814 23 -    660261 TAGA-CTTT----GTCTCTATGTTC-TAA-----------------------
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30670 24 +     49224 TAGA-CCTG----TCCTCTATACAC-TAA----------------------A
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              11196 24 -     32273 CAGA-CTTG----TTCTCTGTGCAC-TAA----------------------A
i Gorilla_beringei.k141_3596273                          I 14 C 0
s Gorilla_gorilla.LT578341.1                             186333344 24 + 186649187 CAGA-CTTG----TTCTCTGTGCAC-TAA----------------------A
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   30394 24 +     78134 TAGA-CTTG----TCCTCTATACAC-TAA----------------------A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           2795 24 -     19426 TAGA-TTTG----TTCTCTATGCAC-TAA----------------------T
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              7939 24 -     15286 TAGA-TTTG----TTCTCTATGCAC-TAA----------------------T
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                              9577 24 +     18253 TAGA-TTTG----TTCTCTATGCAC-TAA----------------------T
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                          9680 24 -     41752 TAGA-TTTG----TTCTCTATGCAC-TAA----------------------T
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                          9513 24 -     16460 TAGA-TTTG----TTCTCTATGCAC-TAA----------------------T
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238460 24 +    327341 CAGA-CTTG----GCCTCTATGCAC-TGA----------------------A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 252
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18018 23 +     36099 TAGA-CTTT----GTCTCTATGTTC-TAA-----------------------
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20659885 15 +  22651954 TAGT-CTT---------T----TAC-TAA----------------------A
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112371 24 +    128679 TAGA-CTTG----GTCTCTATGTTC-TAA----------------------A
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108615 24 +   1711038 CAGA-CTTG----GTCTCCATGCTC-TAA----------------------A
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               40056 24 +     43066 CAGA-CTTG----GTCTCCATGCTC-TAA----------------------A
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    430091 24 +    630532 CAGA-CTTG----TTCTCTGTGCAC-TAA----------------------A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  40935 24 +     55795 TAGA-CTTG----GCCTCTATACAC-TGA----------------------A
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 301
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20364 24 -    143317 CAGT-TTTG----CCTTTTATGCAG-TAA----------------------A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_307679                               13022 24 -     15490 CAGA-CTTG----TTCTCTGTGCAC-TAA----------------------A
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              55027 24 +     67168 CAGA-CTTG----TTCTCTGTGCAC-TAA----------------------A
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189538677 24 - 191637585 CAGA-CTTG----TTCTCTGTGCAC-TAA----------------------A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3331570 24 -  11177569 CAGA-CTTG----TTCTCTGTGCAC-TAA----------------------A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      81460 24 +    135385 TAGA-CTTA----TCTTTTATACAC-TAA----------------------A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514918 24 -   7955117 CAGA-CTTA----TCTTCTATGCAC-TAA----------------------A
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   18496 24 +     31101 TAGA-CTCA----TTCTCTATGTGC-TAA----------------------C
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22775 24 +     23964 GAGG-CTTG----GTCTCTATGTTC-TAA----------------------A
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271685 23 -   9596543 TAGA--TTG----TCCCCCATGCTC-TGA----------------------A
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                2137 24 -      3359 GAGA-CTTG----ATCTCTATGTTC-TAA----------------------A
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    12813 24 -     42476 TAAA-CTTT----GCTTCTGTGCAC-TAA----------------------T
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15520039 24 -  30322482 TAGA-TTTG----TTCTCTATGCAC-TAA----------------------T
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6951 24 -     23766 TGGA-CTTG----TTCTCTATGCGC-TAA----------------------T
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24898 24 +     45836 TGGA-CTTG----TTCTCTATGCAC-TAA----------------------T
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31811 24 -     32627 TGGA-CTTG----TTCTCTATGCGC-TAA----------------------A
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      22953 24 +     54090 TGGA-CTTG----TTCTCTATGCGC-TAA----------------------T
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3036438 24 +   3914936 TAGA-CTTG----GCCTCTATGCAC-AGA----------------------A
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             267827 24 -    662738 GAGA-CTTG----GTCTCTATGTTC-TAA----------------------A
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1432445 24 +   1826925 CGGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            1018 24 +     11245 TAGA-CTCG----TTCTTTATGCAC-CAA----------------------A
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999855 24 +   6120653 TAGA-CTCG----TTCTTTATGCAC-CAA----------------------A
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17952037 24 -  59628241 TAGA-CTTG----GCCTCTATGCAC-tga----------------------a
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               2266 24 +     40492 CGGA-CTTG----TTCTCTGTGCAC-TAA----------------------A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59671521 24 +  60120075 CGGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  8021 24 -     26193 CGGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75818 24 -    114318 CGGA-CTTG----CTTTCTGTGCAC-TAA----------------------A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  1533 24 -     23192 CGGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                10986 24 -     29190 CAGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  19553 24 +     37952 CGGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834641 24 + 187317192 CGGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25453204 24 -  25927173 CGGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  75402 24 +     89720 CGGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 2400 24 +     20474 CGGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   2201 24 -     14993 CGGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  325073 24 -    668171 CAGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                  504 24 -     24072 CGGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               21140 24 -     45290 CGGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87852 24 +     94391 AAGA-CTTG----GTCTCTTTGCAG-TAA----------------------A
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23932689 24 -  24302211 CGGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346866 24 +    752769 CGGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15924 24 +    737560 CAGA-CATG----ATCTCTAAGCAC-Taa----------------------a
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              47313 24 -    317179 CAGA-CATG----ATCTCTATGCAC-TAA----------------------A
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097768 24 -  40650429 CAGA-CTTA----TCTTCTATGCAC-TAA----------------------A
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         7122 24 -    207569 TAGA-CTTG----GTCTCTACACAC-TAA----------------------A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6817 24 +     13704 TAAA-TTTG----GCCCCTATCCAC-TGA----------------------A
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3443 24 +     10310 GAGA-CTTG----GTCTCTATGTTC-TAA----------------------A
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18287435 24 -  93316391 TGGA-CTTA----TTCTCTGTGTGC-TAA----------------------T
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13744 24 -     19307 TAAA-CTTT----GCCTCTATGCAT-TAA----------------------A
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849435 24 +   8254450 TAAA-CTTT----GTCTCTATGCAC-TAA----------------------A
i Miniopterus_natalensis.LDJU01000034.1                  T 200 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             33312 24 +     64694 TAAA-CTTT----GTCTCTATGCAC-TAA----------------------A
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           4439 24 -     28506 CGGA-CTTG----CTCTCTGTGCAT-TAA----------------------A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62768 24 -     63350 TAGA-CTTG----GCCTCTATGCAC-AGA----------------------A
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      5003 24 -     37649 TGGA-CTTA----TTCTCTATGTGC-TAA----------------------T
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26948 24 -    437263 GAGA-CTTG----GTCTCTATGTTC-TAA----------------------A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138148 23 -    366855 TAAA-CTCT----GTCTCTATG-AC-TAA----------------------A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                    900 23 +     82753 TACA-CTTT----GTCTCTATGTTC-TAA-----------------------
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31668 24 +     37127 TAGA-CTTG----GCCTCTAGGCAC-TGA----------------------A
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 276
s Murina_feae.MurFea_scaffold_85699                           5460 24 +     14753 TAAA-CTTT----GCCTCTGTGCAC-TAA----------------------A
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2663 24 +     14296 TAGA-CTTG----TCCTCTATACAC-TAA----------------------A
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               298002 24 -  14710649 TCAA-CTTG----GCCTCTATGCAC-TGA----------------------A
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                278632 24 -  10118263 TAAA-CTTT----GCCTCTGTGCAC-TAA----------------------A
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1586187 24 -   6019432 TAAA-CTTT----ACCTCCGTGCAC-TAA----------------------A
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902396 24 -   4330536 TAAA-CTTT----GCCTCTGTGCAC-TAA----------------------A
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32956 24 +     33610 TAAA-CTTT----ACCTCTGTGCAC-TAA----------------------A
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186440 24 +    196477 TAAA-CTTA----TTCTCTGTGTAC-CAA----------------------A
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025825 24 -   3037898 TAGA-CTTG----TCATCCATGCAC-TAA----------------------A
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               10439 24 +     21681 CAGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865904 24 +   7148211 GAGA-CTTG----GTCTCTATGTTC-TAA----------------------A
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756707 24 +    783361 TAAA-CTTT----GGCTCAATGCAC-TGA----------------------A
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146298 24 -   9404916 TAGA-CTTG----GCCTCTATGCAC-TGa----------------------a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102574818 24 - 196305487 TAGA-CTCG----TTCTTTATGCAC-CAA----------------------A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2504 24 +      8486 TAGA-CTCG----TTCTTTATGCAC-CAA----------------------A
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105745245 24 + 199412804 TAGA-CTCG----TTCTTTATGCAC-CAA----------------------A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1358969 24 +   3988456 CAGA-TATG----TTCCCCAGACAC-TAC----------------------A
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              501055 24 -   2017862 TAGA-CTTG----GCCTCTATGCAC-TGA----------------------A
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         145220 23 +    630418 TAGA-ATTT----GTCTCTATGTTC-TAA-----------------------
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          76731 23 -    150152 TAGA-CTTT----GTCTCTATGTTC-TAA-----------------------
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  2781819 24 -  10937097 GAGA-CTTG----GTCTCTATGTTC-TAA----------------------A
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       459051 24 -    559221 TAGA-CTTG----GCCTCTATGCAC-tga----------------------a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17585993 23 +  44047080 TAGA-CTTT----GTCTCTATGTTC-TAA-----------------------
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      173970 23 -    191736 TAGA-CTTT----GTCTCTATGTTC-TAA-----------------------
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    39313 24 +     80009 CAGA-CTTG----TTCTCTGTGCAC-TAA----------------------A
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03001836.1                             25230 24 +     51860 CAGA-CTTG----TTCTCTGTGCAC-TAA----------------------A
i Pan_troglodytes.NBAG03001836.1                         C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  147447 24 +    230217 TAGA-CTTG----GCCTCTATGTAC-TCA----------------------A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 303
s Panthera_pardus.KV860321.1                                260156 24 +  18783137 TAGA-CTTG----GCCTCTATGTAc-tca----------------------a
i Panthera_pardus.KV860321.1                             C 0 I 802
s Panthera_tigris.KE722367.1                               4717303 24 -   8748460 TAGA-CTTG----GCCTCTATGTac-tca----------------------a
i Panthera_tigris.KE722367.1                             C 0 I 293
s Pantholops_hodgsonii.KE114653.1                          1264903 23 -   2937107 TAGT-CTTT----GTCTCTATGTTC-TAA-----------------------
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183438474 24 + 183742232 CGGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             2167 24 +     20448 CGGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20558972 24 +  20919399 CGGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                    910 24 +     41871 CGGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     4196 24 +     27711 CGGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  4281 24 +      9205 CAGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9184 24 -     78924 TGGA-CTTG----GCCTCTATACAT-TGA----------------------A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 246
s Perodicticus_ibeanus.k141_855320                            4993 24 +     13100 TAGA-CTCA----TTCTCTATGCAC-CAA----------------------A
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             3361 24 +     25941 TAGA-CTTG----TTCTCTATGCAC-CAA----------------------A
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25604 24 +     32600 TAGA-CTTA----TCTGCCATATAT-TAA----------------------A
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     26639 24 -     29689 TAGA-CTTG----TCTTTTATGTAC-TAA----------------------G
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8866 24 +     63832 GAGA-CTTG----GTCTCTATGTTC-TAA----------------------A
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38951 24 +     62158 TGGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33673 24 +     89929 TGGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            35089 24 +     51399 TGGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14291325 24 -  14605196 TGGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              766 22 +     22620 TAAA-CTTT----GCCTCT--GCAT-TAA----------------------A
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34572 24 +     35617 GAGA-CTTG----GTCTCTATGTTC-TAA----------------------A
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189126401 24 + 189387572 CAGA-CTTG----TTCTCTGTGCAC-TAA----------------------A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9566007 24 +   9816681 CAGA-CTTG----TTCTCTGTGCAC-TAA----------------------A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68600 24 -     81375 CAGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                               421 24 +     19060 CAGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2592692 24 -   4620579 TAGA-TTTG----TTCTCTATGCAC-TAA----------------------T
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986705 24 +   2598838 TAGA-CTTG----TTCTCTATGCAC-TAA----------------------C
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          24994 24 +     38485 TAGA-CTTG----TTCTCTATGCAC-TAA----------------------C
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             1155 22 +      4256 TAGA-CTTG----TTCTCTATGCA---AG----------------------A
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22513 24 +     35766 TAGA-CTTG----TTCTCTATGCAC-TAA----------------------C
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            696 24 -     24134 TAGA-CTTG----TTCTCTATGCAC-TAA----------------------C
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24508 24 -     67325 TAGA-CTTG----TTCTCTATGCAC-TAA----------------------C
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            753 24 -      6182 TAGA-CTTG----TTCTCTATGCAC-GAA----------------------C
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11541 24 -     21811 TAAA-CTTT----GTCTCTCTGCAC-TGA----------------------A
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         37013 24 +     42204 TAAA-CTTG----GCCTCTATGCAC-TGA----------------------A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22974014 24 +  28871421 AAGA-CTTG----GTCTCTATGCAC-TAA----------------------A
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1952 24 -      8028 AAGA-CTTG----GTCTCTATGCAC-TAA----------------------A
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20270611 24 -  38429054 TAGA-CTTG----CCCTCTATGTAc-tca----------------------a
i Puma_concolor.QAVW01001104.1                           C 0 I 279
s Pygathrix_cinerea.k141_1153803                             10432 24 -     91421 CAGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7604560 24 +   7812017 CAGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10401 24 -     72585 CAGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5468 23 +     55207 TAGA-CTTT----GTCTCTATGTTC-TAA-----------------------
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        367162 24 -   3329780 CAGA-CTTG----GTCTCTATGCAC-TAA----------------------A
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             2116 24 -     11128 CAGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91231471 24 - 195417433 CAGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7667120 24 +   7961872 CAGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                84999 24 -     96226 AAGA-CTTA----ATCTCTATGCAC-TAA----------------------A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_373180                       4187 14 +      4321 -aga-ctct----gatgcta--------------------------------
i Saiga_tatarica.SaiTat_scaffold_373180                  I 100 N 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151680 24 -    313613 GAGA-TTTG----TTCTCTAAGCAT-GAA----------------------C
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          14944 24 -     19888 CAGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      22146 24 +     39453 CAGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2672 24 +     27826 CAGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             2193 24 -     19483 CAGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      2255 24 +      7198 CAGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         10515 24 +     15514 CAGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            188001 24 -    191337 CAGA-CTTG----GTCTTGATGCAC-TAA----------------------A
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13648176 17 -  18376816 TAGA-CTTG----GTCTCTATG------------------------------
i Sorex_araneus.JH798187.1                               I 1 C 0
s Spermophilus_dauricus.KZ294078.1                         1948556 24 -   3870691 CAGA-CTTA----TCTTCTATGCAC-TAA----------------------A
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27547 24 +     97271 TAGA-CTTG----GTCTCTATGTAC-TGA----------------------A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14542 24 -    196729 TAGA-CTTG----GCCTCTATGCAC-TGA----------------------A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 309
s Sus_scrofa.CM000828.4                                   62882794 24 -  69701581 TAGA-CTGG----GTCTTTATGCTC-TAG----------------------A
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1088721 24 -   1523678 CAGA-CTTG----TTCTCTGTGCAC-TAA----------------------A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 7153 24 +     41958 TAAA-CTTG----GTCTCTGCGCAC-TAA----------------------A
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69794 24 +    116680 TAAA-CTTA----TTATCTGTGTAC-CAA----------------------A
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115544 24 -    156842 TAGA-CTTG----GTCTCTATGCAC-TAA----------------------A
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    383998 24 +    539355 GAGA-CTTG----GTCTCTATGCAC-TAA----------------------A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               10992 24 +     70052 TAGA-CTTG----TTCTCTGTGCAC-TAA----------------------A
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               15297 24 +     25099 TAGA-CTTG----TTCTCTGTGCAC-TAA----------------------A
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186423518 24 + 186847797 CGGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103774 24 +    114563 TAGA-CTTG----CCTTTTATGTAC-TAA----------------------G
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   2171 24 +      8208 TGGA-CTTG----GTCTCTCTGCAC-CAA----------------------A
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     79289 24 +    610378 TAAA-TTTG----GTTTCCATGCAT-TAA----------------------A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          6246 24 -     20410 CAGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    10442 24 +     15221 CAGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        6347 24 +     19930 CAGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2777 24 -     19997 CAGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42896 24 -     60166 CAGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        10369 24 -     27529 CAGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     10309 24 -     18194 CAGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           4044 24 -     21137 CAGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2747 24 -     10723 CAGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1899 24 +      9834 CAGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        20217 24 +     32220 CAGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5934314 24 +   6242583 CAGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        3561 24 +     20839 CAGA-CTTG----CTCTCTGTGCAC-TAA----------------------A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                   1134 14 -      1748 TAGA-CTTG----GTCTCT---------------------------------
i Tragulus_javanicus.TraJav_scaffold_140459              I 13 I 1
s Tupaia_chinensis.KB320699.1                              2150741 24 +   4065304 CCGA-TGTG----TTCTCTAAGCAC-TAA----------------------A
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     4039 24 -     10553 TAGA-TGTG----TTCTCTAAGCAC-TAA----------------------A
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15738066 24 +  33153633 GAGA-CTTG----GTCTCTATGTTC-TAA----------------------A
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_97021                    2241 24 -      4736 TAGA-CTTA----CTCTCTAAGCAC-GAA----------------------A
i Uropsilus_gracilis.UroGra_scaffold_97021               C 0 C 0
s Ursus_maritimus.KK499267.1                               4847255 24 -   5085361 TACA-TTTG----GCCTCTATGCAC-TGA----------------------A
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   7380 24 +     50397 TAGA-TTTG----TTCTCTATGCAC-TAA----------------------T
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              7428 24 +     24756 TAGA-TTTG----TTCTCTATGCAC-TAA----------------------T
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368747  8 -   5488506 TAGA-CTTG-------------------------------------------
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7712 24 -     43706 TAGA-CTTG----GCCTCTATGCAC-TGA----------------------A
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        20058 24 -     24430 CAGA-CTTA----ACTTCTGTGCAC-TAA----------------------A
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          2177 24 +      2932 TAGA-CTTG----GCCTCTATGCGC-TGA----------------------A
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      10829 22 +     63895 TAGA--TTG----TCCTC-ATGCAC-TAA----------------------A
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 529 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11758 24 +     12536 GAGA-CTTG----GTCTCTATGTTC-TAA----------------------A
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Galagoides_demidoff.k141_31856                              3217  0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1985 8 +     62944 GCC-TCCC-A
s Acinonyx_jubatus.LLWD01001279.1                           823916 7 -   1699592 GTT-TTTT--
i Acinonyx_jubatus.LLWD01001279.1                        I 295 I 1
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507364 7 -  29979442 gtt-tttt--
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 1
s Ailurus_fulgens.LNAC01001112.1                             75941 7 -    347723 GTT-TTTT--
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 1
s Allactaga_bullata.AllBul_scaffold_9566                     65318 8 -     89534 GGC-TCTT-G
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 2
s Allenopithecus_nigroviridis.k141_3361533                    9965 8 -     52922 GGC-TCCC-A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9896 8 -     28001 GGC-TCCC-A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                           342 8 -     18505 GGC-TCCC-A
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           1191 8 -     12518 GGC-TCCC-A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675719 8 -   2318259 AGG-CTTT-T
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 1
s Anoura_caudifer.AnoCau_scaffold_1412                      183451 7 +    412891 AGC-CTC--C
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 1
s Antilocapra_americana.AntAmePen_scaffold_12469             98201 8 -    100397 AGG-CTTT-T
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 I 1
s Aplodontia_rufa.AprRuf_scaffold_68852                       7622 8 +     20879 GTC-TCTT-G
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14781 8 +     17124 GCC-TCTT-G
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2808 7 +     43469 GGC-CTT--C
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 1
s Avahi_laniger.k141_765380                                  49658 8 -     92717 GGC-ACTT-G
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              50283 8 +     85213 GGC-ACTT-G
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191947 8 +  23207421 GCG-TTTT-G
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2412 8 -     18090 GCC-TTTT-G
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26641 8 +     34529 AGG-CTTT-T
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 1
s Bison_bison.KN261452.1                                    199698 8 -    288883 AGG-TTTT-T
i Bison_bison.KN261452.1                                 C 0 I 1
s Bos_indicus.CM003047.1                                  20272903 8 +  48749331 AGG-TTTT-T
i Bos_indicus.CM003047.1                                 C 0 I 1
s Bos_mutus.JH880303.1                                     1125459 8 -   1948126 AGG-TTTT-T
i Bos_mutus.JH880303.1                                   C 0 I 1
s Bos_taurus.CM000203.6                                   18083541 8 +  45695690 AGG-TTTT-T
i Bos_taurus.CM000203.6                                  C 0 I 1
s Bubalus_bubalis.KI419123.1                               2819208 8 +   4408762 AGG-CTTT-T
i Bubalus_bubalis.KI419123.1                             C 0 I 1
s CanFam4.chr16                                           17796113 7 -  60362399 GTT-TTTT--
i CanFam4.chr16                                          C 0 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182170 7 -    185531 GTT-TTTT--
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 I 1
s Canis_lupus_dingo.QKWQ01000480.1                         9031556 7 -   9314153 gtt-tttt--
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 1
s Canis_lupus_familiaris.chr16                            17955821 7 -  59632846 gtt-tttt--
i Canis_lupus_familiaris.chr16                           C 0 I 1
s Canis_lupus_orion.HG994398.1                            18497121 7 +  63665305 gtt-tttt--
i Canis_lupus_orion.HG994398.1                           C 0 I 1
s Capra_aegagrus.CM003241.1                               18829837 8 +  46296322 AGG-CTTT-T
i Capra_aegagrus.CM003241.1                              C 0 I 1
s Capra_hircus.CM004588.1                                 18060557 8 -  44709034 AGG-CTTT-T
i Capra_hircus.CM004588.1                                C 0 I 1
s Carlito_syrichta.NW_007259797.1                           141402 8 -    496798 GGC-Tctt-a
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                3225 7 -     11696 GGC-CTT--C
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 1
s Castor_canadensis.CasCan_scaffold_2074                    133988 8 +    179628 GGC-TTTT-G
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89600 8 +    217609 GGC-TTTT-G
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 1
s Cavia_aperea.AVPZ01000300.1                             18348002 8 -  23392119 GGC-TCTT-A
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18360262 8 -  23407841 GGC-TCTT-A
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        99136 8 +    143979 GGC-TCTT-A
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         5317 8 -      8605 GGC-TCTT-A
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12228238 7 +  27778364 GGC-ttcc--
i Ceratotherium_simum.JH767749.1                         C 0 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2956 7 -      3715 GGC-TTCC--
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 I 1
s Cercocebus_atys.KQ010504.1                               4470925 8 +   4669795 GGC-TCCC-A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         9474 8 -     19203 GGC-TCCC-A
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3895 8 +      8260 GGC-TCCC-A
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           4123 8 +     27781 GGC-TCCC-A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         4281 8 -     20310 GGC-TCCC-A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           7265 8 +     29689 GGC-TCCC-A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            1703 8 +      9989 GGC-TCCC-A
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9949 8 -     27936 GGC-TCCC-A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9975 8 -     11289 GGC-TCCC-A
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38812347 8 +  39242232 GGC-TCCC-A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21218046 8 -  21565898 GGC-TCCC-A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       35165 8 -     53127 GGC-TCCC-A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        2450 8 +      7159 GGC-TCCC-A
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9968 8 -     27947 GGC-TCCC-A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9944 8 +     17596 GGC-TCCC-A
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         40444 8 -     41420 GGC-TCCC-A
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            5135 8 -      6351 TTT-TTTT-G
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             17074 8 -     52598 GGC-TCTT-G
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12424 8 +     57038 GGC-TCTT-G
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1251340 8 +   2543920 GGC-TCTT-G
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18423907 8 -  18827391 GGC-TCCC-A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       10348 8 -     50209 GGC-TCCC-A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135417356 8 + 135778131 GGC-TCCC-A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15513 8 +     19366 GTT-TTTT-G
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170612 8 +    839153 gtt-tttt-t
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1905882 8 +   2368649 GGC-TCCC-A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199945552 8 + 200372422 GGC-TCCC-A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              32423 8 +     84244 GGC-TCCC-A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17546645 8 -  53390261 gtt-tttc-a
i Condylura_cristata.JH655891.1                          C 0 I 8
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10865 7 -     20389 GGC-TTT--C
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 1
s Crocidura_indochinensis.CroInd_scaffold_807070               566 9 +      1402 AAT-TTTTTT
i Crocidura_indochinensis.CroInd_scaffold_807070         I 125 I 283
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24811 8 -     87169 TTTTTTTT--
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 241 I 1
s Cuniculus_paca.CunPac_flattened_line_231100                 3411 8 +      5455 GGC-TCTT-G
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1764 8 +      3576 GGC-TCTT-G
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            61404 8 +   2246927 GGT-TTTT-G
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12533245 8 -  12879189 GGC-TCTT-G
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811582 8 +  35494412 GCA-TTTT-G
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8628257 7 +  20541912 GGC-CTt--c
i Desmodus_rotundus.KZ672289.1                           C 0 I 1
s Dicerorhinus_sumatrensis.PEKH010002091.1                  670086 7 +   1390856 GCC-TTtc--
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 1
s Diceros_bicornis.DicBicMic_scaffold_5955                    2846 7 +    198055 GGC-TTCC--
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 1
s Dinomys_branickii.DinBra_scaffold_21862                    34825 8 +     67921 GGC-TCTT-G
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18896150 8 +  37912305 GAC-TCTT-A
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  12368 8 +     14536 GAC-TCTT-A
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 32012 8 -     42551 GGC-TCTT-G
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE759718.1                                   7770 7 +     11740 gtc-ttt--c
i Eidolon_helvum.KE759718.1                              C 0 I 1
s Elaphurus_davidianus.JRFZ01104969.1                       310872 8 +    607251 AGG-CTTT-T
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 1
s Enhydra_lutris.KZ291758.1                               16326128 7 -  41312741 GTC-TCTt--
i Enhydra_lutris.KZ291758.1                              C 0 I 1
s Eptesicus_fuscus.JH977646.1                              2144412 7 -  14770903 GGC-att--c
i Eptesicus_fuscus.JH977646.1                            C 0 I 1
s Equus_asinus.JREZ01000139.1                              1280125 7 +   4378816 GTC-TTTC--
i Equus_asinus.JREZ01000139.1                            C 0 I 1
s Equus_caballus.CM000403.2                               18527946 7 -  39960074 GGC-TTTC--
i Equus_caballus.CM000403.2                              C 0 I 1
s Equus_przewalskii.KK951119.1                               29961 7 +    498745 GGC-TTTC--
i Equus_przewalskii.KK951119.1                           C 0 I 1
s Erinaceus_europaeus.JH835339.1                           3325658 8 -   7059049 GTt-tgtc-a
i Erinaceus_europaeus.JH835339.1                         C 0 I 175
s Erythrocebus_patas.Contig38                             21200538 8 -  21539334 GGC-TCCC-A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11258 8 +    133382 GCC-TTTT-G
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             25195 8 -     44125 GCC-TTTT-G
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Eulemur_albifrons.k141_342033                               9755 8 -     14127 GGC-ACTT-G
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                2453 8 -     16928 GGC-ACTT-G
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              11486 8 -     25546 GGC-ACTT-G
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             8671 8 +     26330 GGC-ACTT-G
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                  9928 8 +     23973 GGC-ACTT-G
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 8671 8 +     75513 GGC-ACTT-G
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  6623 8 +     97555 GGC-ACTT-G
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                             9549 8 +     26496 GCC-ACTT-G
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                   155 8 -     17153 GGC-ACTT-G
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                               9734 8 +    111500 GGC-ACTT-G
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20233770 7 + 206538554 GTT-TTTT--
i Felis_catus.CM001381.2                                 I 279 I 1
s Felis_catus_fca126.CM031415.1                           20192618 7 + 205367284 gtt-tttt--
i Felis_catus_fca126.CM031415.1                          I 297 I 1
s Felis_nigripes.FelNig_flattened_line_20823                  6129 7 -     36744 GTT-TTTT--
i Felis_nigripes.FelNig_flattened_line_20823             I 283 I 1
s Galeopterus_variegatus.GalVar_scaffold_56069               25810 8 +     26054 GCC-TCTG-G
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     608837 8 -    660261 AGG-CTTT-T
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 I 1
s Glis_glis.GliGli_scaffold_19807                            30694 8 +     49224 GCC-TCTC-A
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              11220 8 -     32273 GCC-TCCC-A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186333368 8 + 186649187 GCC-TCCC-A
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   30418 8 +     78134 GCC-TCTC-A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           2819 8 -     19426 GGC-ACTT-G
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              7963 8 -     15286 GGC-ACTT-G
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                              9601 8 +     18253 GGC-ACTT-G
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                          9704 8 -     41752 GGC-ACTT-G
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                          9537 8 -     16460 GGC-ACTT-G
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238736 7 +    327341 ATT-TTTT--
i Helogale_parvula.HelPar_flattened_line_2585            I 252 I 1
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18041 8 +     36099 AGG-CTTT-T
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 I 1
s Heterocephalus_glaber.JH602082.1                        20659900 8 +  22651954 GGC-TCTT-G
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112395 8 +    128679 GGC-CTTT-G
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108639 7 +   1711038 GGT-TTT--C
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 1
s Hipposideros_galeritus.HipGal_scaffold_29171               40080 7 +     43066 GGT-TTT--C
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 I 1
s Hoolock_leuconedys.ctg274                                    430115 8 +    630532 GCC-TCCC-A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  41260 7 +     55795 GAT-TTTT--
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 301 I 1
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20388 8 -    143317 GGC-TCTT-T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_307679                               13046 8 -     15490 GCC-TCCC-A
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              55051 8 +     67168 GCC-TCCC-A
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189538701 8 - 191637585 GCC-TCCC-A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3331594 8 -  11177569 GCC-TCCC-A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      81484 8 +    135385 GGA-TCTT-G
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514942 8 -   7955117 GTC-TCTT-G
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   18520 8 +     31101 GGC-AATT-G
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22799 8 +     23964 GCC-TTTT-G
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271708 8 -   9596543 GGC-TCTA-G
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                2161 8 -      3359 GCC-TTTT-G
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    12837 7 -     42476 GGC-ATT--C
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 1
s Lemur_catta.scaffold_24                                 15520063 8 -  30322482 GGC-ACTT-G
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6975 8 -     23766 GGC-TCTT-G
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24922 8 +     45836 GGC-TCTT-G
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31835 8 -     32627 GGC-TCTT-G
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      22977 8 +     54090 GGC-TCTT-G
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3036462 7 +   3914936 GTT-TTTt--
i Leptonychotes_weddellii.KB714746.1                     C 0 I 1
s Lipotes_vexillifer.KE559953.1                             267851 8 -    662738 GCC-TTTT-G
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1432469 8 +   1826925 GGC-TCCC-A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            1042 8 +     11245 GCC-TCTT-G
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999879 8 +   6120653 GCC-TCTT-G
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17952061 7 -  59628241 gtt-tttt--
i Lycaon_pictus.CM007581.1                               C 0 I 1
s Macaca_arctoides.k141_2326796                               2290 8 +     40492 GGC-TCCC-A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59671545 8 +  60120075 GGC-TCCC-A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  8045 8 -     26193 GGC-TCCC-A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75842 8 -    114318 GGC-TCCC-A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  1557 8 -     23192 GGC-TCCC-A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                11010 8 -     29190 GGC-TCCC-A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  19577 8 +     37952 GGC-TCCC-A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834665 8 + 187317192 GGC-TCCC-A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25453228 8 -  25927173 GGC-TCCC-A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  75426 8 +     89720 GGC-TCCC-A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 2424 8 +     20474 GGC-TCCC-A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   2225 8 -     14993 GGC-TCCC-A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  325097 8 -    668171 GGC-TCCC-A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                  528 8 -     24072 GGC-TCCC-A
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               21164 8 -     45290 GGC-TCCC-A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87876 7 +     94391 GTC-TTT--C
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 1
s Mandrillus_leucophaeus.scaffold280                      23932713 8 -  24302211 GGC-TCCC-A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346890 8 +    752769 GGC-TCCC-A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15948 7 +    737560 gac-ttta--
i Manis_javanica.JSZB01003497.1                          C 0 I 1
s Manis_pentadactyla.KN006162.1                              47337 7 -    317179 GAC-TTTa--
i Manis_pentadactyla.KN006162.1                          C 0 I 1
s Marmota_marmota.CZRN01000018.1                          33097792 8 -  40650429 GTC-TCTT-G
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         7146 7 -    207569 GGC-TCT--G
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 1
s Mellivora_capensis.MelCap_flattened_line_69365              6841 7 +     13704 GTC-TTTT--
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 1
s Mesoplodon_bidens.MesBid_scaffold_108144                    3467 8 +     10310 GCC-TTTT-G
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18287459 8 -  93316391 GGC-TCTT-g
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13768 7 -     19307 GGC-CTT--C
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 1
s Miniopterus_natalensis.LDJU01000034.1                    1849459 7 +   8254450 GGC-ATT--C
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 1
s Miniopterus_schreibersii.MinSch_scaffold_18080             33336 7 +     64694 GGC-ATT--C
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 1
s Miopithecus_ogouensis.k141_534055                           4463 8 -     28506 GGC-TCCC-A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62792 7 -     63350 GTT-TTTT--
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 I 1
s Mirza_zaza.k141_952172                                      5027 8 -     37649 GGC-TCTT-G
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26972 8 -    437263 GCA-TTTT-G
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138171 7 -    366855 GGC-TTT--C
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 1
s Moschus_moschiferus.MosMos_scaffold_13123                    923 8 +     82753 AGG-CTTT-T
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 1
s Mungos_mungo.MunMun_flattened_line_23663                   31968 6 +     37127 ATT-T-TT--
i Mungos_mungo.MunMun_flattened_line_23663               I 276 I 1
s Murina_feae.MurFea_scaffold_85699                           5484 7 +     14753 AGC-ATT--C
i Murina_feae.MurFea_scaffold_85699                      C 0 I 1
s Muscardinus_avellanarius.MusAve_scaffold_82313              2687 8 +     14296 GCC-TCTC-A
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               298026 7 -  14710649 GTC-TCTt--
i Mustela_putorius.JH418006.1                            C 0 I 1
s Myotis_brandtii.KE162005.1                                278656 7 -  10118263 GGC-ATT--c
i Myotis_brandtii.KE162005.1                             C 0 I 1
s Myotis_davidii.KB100139.1                                1586211 7 -   6019432 GGC-ATt--c
i Myotis_davidii.KB100139.1                              C 0 I 1
s Myotis_lucifugus.GL429869.1                              3902420 7 -   4330536 GGC-ATt--c
i Myotis_lucifugus.GL429869.1                            C 0 I 1
s Myotis_myotis.MyoMyo_scaffold_28916                        32980 7 +     33610 GGC-ATT--C
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 I 1
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186464 8 +    196477 TGT-TTTT-T
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025849 8 -   3037898 GGC-TTTT-G
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               10463 8 +     21681 GGC-TCCC-A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865928 8 +   7148211 GCA-TTTT-G
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756731 7 +    783361 GGT-CTT--C
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 1
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146322 7 -   9404916 gtt-tttt--
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 1
s Nycticebus_bengalensis.LG01                            102574842 8 - 196305487 GCC-TCTT-G
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2528 8 +      8486 GCC-TCTT-G
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105745269 8 + 199412804 GCC-TCTT-G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1358993 2 +   3988456 GG--------
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              501079 7 -   2017862 GTT-tttt--
i Odobenus_rosmarus.KB229312.1                           C 0 I 1
s Odocoileus_virginianus.KZ100018.1                         145243 8 +    630418 AGG-CTTT-T
i Odocoileus_virginianus.KZ100018.1                      C 0 I 1
s Okapia_johnstoni.LVCL01S0005463.1                          76754 8 -    150152 ATG-CTTT-T
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 1
s Orcinus_orca.KB316932.1                                  2781843 8 -  10937097 GCC-TTTT-G
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       459075 7 -    559221 gtt-tttt--
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 1
s Ovis_aries.CM001607.2                                   17586016 8 +  44047080 AGG-CTTT-T
i Ovis_aries.CM001607.2                                  C 0 I 1
s Ovis_canadensis.OviCan_scaffold_2572                      173993 8 -    191736 AGG-CTTT-T
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 I 1
s Pan_paniscus.KQ411613.1                                    39337 8 +     80009 GCC-TCCC-A
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03001836.1                             25254 8 +     51860 GCC-CCCC-A
i Pan_troglodytes.NBAG03001836.1                         C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  147774 7 +    230217 GTT-TTTT--
i Panthera_onca.PanOnc_flattened_line_3271               I 303 I 1
s Panthera_pardus.KV860321.1                                260982 7 +  18783137 GTT-TTTT--
i Panthera_pardus.KV860321.1                             I 802 I 1
s Panthera_tigris.KE722367.1                               4717620 7 -   8748460 GTT-TTTT--
i Panthera_tigris.KE722367.1                             I 293 I 1
s Pantholops_hodgsonii.KE114653.1                          1264926 8 -   2937107 AGG-CTTT-T
i Pantholops_hodgsonii.KE114653.1                        C 0 I 1
s Papio_anubis.CM001495.2                                183438498 8 + 183742232 GGC-TCCC-A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             2191 8 +     20448 GGC-TCCC-A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20558996 8 +  20919399 GGC-TCCC-A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                    934 8 +     41871 GGC-TCCC-A
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     4220 8 +     27711 GGC-TCCC-A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  4305 8 +      9205 GGC-TCCC-A
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9454 6 -     78924 GTT-T-TT--
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 246 I 1
s Perodicticus_ibeanus.k141_855320                            5017 8 +     13100 GCC-TCTT-G
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             3385 8 +     25941 GCC-TCTT-G
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25628 8 +     32600 GAC-CCTT-A
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     26663 8 -     29689 GGC-TCTT-G
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8890 8 +     63832 GCA-TTTT-G
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38975 8 +     62158 GGC-TCCC-A
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33697 8 +     89929 GGC-TCCC-A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            35113 8 +     51399 GGC-TCCC-A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14291349 8 -  14605196 GGC-TCCC-a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              788 7 +     22620 GGA-ATT--T
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 1
s Platanista_gangetica.PlaMin_flattened_line_32310           34596 8 +     35617 GCC-TTTT-G
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189126425 8 + 189387572 GCC-TCCC-A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9566031 8 +   9816681 GCC-TCCC-A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68624 8 -     81375 GGC-TCCC-A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                               445 8 +     19060 GGC-TCCC-A
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2592716 8 -   4620579 GGC-ACTT-G
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986729 8 +   2598838 GGC-GCTT-G
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          25018 8 +     38485 GGC-GCTT-G
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             1177 8 +      4256 GAC-GCTT-G
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22537 8 +     35766 GGC-GCTT-G
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            720 8 -     24134 GGC-GCTT-G
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24532 8 -     67325 GGC-GCTT-G
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            777 8 -      6182 GGC-GCTT-G
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11565 7 -     21811 GCC-CTT--C
i Pteronotus_parnellii.KE909381.1                        C 0 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_31117         37037 7 +     42204 GTC-TCTT--
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 1
s Pteropus_alecto.KB030862.1                              22974038 7 +  28871421 gcc-ttt--c
i Pteropus_alecto.KB030862.1                             C 0 I 1
s Pteropus_vampyrus.KN534172.1                                1976 7 -      8028 gcc-ttt--c
i Pteropus_vampyrus.KN534172.1                           C 0 I 1
s Puma_concolor.QAVW01001104.1                            20270914 7 -  38429054 GTT-TTTT--
i Puma_concolor.QAVW01001104.1                           I 279 I 1
s Pygathrix_cinerea.k141_1153803                             10456 8 -     91421 GGC-TCCC-A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7604584 8 +   7812017 GGC-TCCC-A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10425 8 -     72585 GGC-TCCC-A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5491 8 +     55207 AGG-CTTT-T
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 1
s Rhinolophus_sinicus.LVEH01000134.1                        367186 7 -   3329780 GGT-ttt--c
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 1
s Rhinopithecus_bieti.k119_217274                             2140 8 -     11128 GGC-TCCC-A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91231495 8 - 195417433 GGC-TCCC-A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7667144 8 +   7961872 GGC-TCCC-A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85023 7 -     96226 ATC-TTT--C
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 1
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151704 8 -    313613 GTT-TTTA-A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 8
s Semnopithecus_entellus.k141_11662                          14968 8 -     19888 GGC-TCCC-A
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      22170 8 +     39453 GGC-TCCC-A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2696 8 +     27826 GGC-TCCC-A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             2217 8 -     19483 GGC-TCCC-A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      2279 8 +      7198 GGC-TCCC-A
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         10539 8 +     15514 GGC-TCCC-A
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            188025 8 -    191337 AGT-TCTT-G
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 I 2
s Sorex_araneus.JH798187.1                                13648193 8 -  18376816 Aat-gctt-t
i Sorex_araneus.JH798187.1                               C 0 I 2
s Spermophilus_dauricus.KZ294078.1                         1948580 8 -   3870691 GTC-TCTT-G
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27571 7 +     97271 GTT-TTTT--
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 1
s Suricata_suricatta.SurSur_flattened_line_6629              14875 7 -    196729 ATT-TTTT--
i Suricata_suricatta.SurSur_flattened_line_6629          I 309 I 1
s Sus_scrofa.CM000828.4                                   62882818 8 -  69701581 GGC-TTTT-G
i Sus_scrofa.CM000828.4                                  C 0 I 1
s Symphalangus_syndactylus.tarseq_199                      1088745 8 -   1523678 GCC-TCCC-A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 7177 7 +     41958 GGC-GGT--C
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 1
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69818 8 +    116680 TGT-TTTT-T
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115568 7 -    156842 GGC-TTTC--
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 1
s Tapirus_terrestris.TapTer_scaffold_755                    384022 7 +    539355 GGC-TTTC--
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 1
s Tarsius_lariang.k141_2201908                               11016 8 +     70052 GGC-TCTT-A
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               15321 8 +     25099 GGC-TCTT-A
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186423542 8 + 186847797 GGC-TCCC-A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103798 8 +    114563 GGC-TTTT-G
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   2195 8 +      8208 GGT-TTTT-G
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     79313 7 +    610378 GGC-CTT--C
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 1
s Trachypithecus_auratus.k141_722599                          6270 8 -     20410 GGC-TCCC-A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    10466 8 +     15221 GGC-TCCC-A
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        6371 8 +     19930 GGC-TCCC-A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2801 8 -     19997 GGC-TCCC-A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42920 8 -     60166 GGC-TCCC-A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        10393 8 -     27529 GGC-TCCC-A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     10333 8 -     18194 GGC-TCCC-A
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           4068 8 -     21137 GGC-TCCC-A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2771 8 -     10723 GGC-TCCC-A
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1923 8 +      9834 GGC-TCCC-A
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        20241 8 +     32220 GGC-TCCC-A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5934338 8 +   6242583 GGC-TCCC-A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        3585 8 +     20839 GGC-TCCC-A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                   1149 8 -      1748 AGG-TTTT-G
i Tragulus_javanicus.TraJav_scaffold_140459              I 1 I 1
s Tupaia_chinensis.KB320699.1                              2150765 8 +   4065304 GGC-TCTC-C
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     4063 8 -     10553 GGC-TCTC-C
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15738090 8 +  33153633 GCC-TTTT-G
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_97021                    2265 8 -      4736 GTT-TTTC-A
i Uropsilus_gracilis.UroGra_scaffold_97021               C 0 n 0
s Ursus_maritimus.KK499267.1                               4847279 7 -   5085361 GTT-TTTT--
i Ursus_maritimus.KK499267.1                             C 0 I 1
s Varecia_rubra.k141_590885                                   7404 8 +     50397 GGC-ACTT-G
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              7452 8 +     24756 GGC-ACTT-G
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7736 7 -     43706 GTT-TTTT--
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 1
s Xerus_inauris.XerIna_scaffold_48378                        20082 8 -     24430 GTC-TCTT-C
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          2201 7 +      2932 GTT-tttt--
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 I 1
s Zapus_hudsonius.ZapHud_scaffold_11398                      10851 8 +     63895 GTC-TTGT-G
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11782 8 +     12536 GCC-TTTT-G
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906 0 -     10935 C
e Vicugna_pacos.KN270157.1                                 5368755 0 -   5488506 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Procavia_capensis.ProCapCap_scaffold_85530                 10240 0 -     22811 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Loxodonta_africana.GL010049.1                            4214777 0 -  43346337 C
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491 0 +       961 C
e Galagoides_demidoff.k141_31856                              3217 0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089268 0 +  10337057 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Camelus_ferus.KB017975.1                                  400004 0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2331728 0 -   7040546 C
e Camelus_bactrianus.KN276810.1                            9999264 0 -  17673402 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1993 2 +     62944 AA
s Acinonyx_jubatus.LLWD01001279.1                           823924 2 -   1699592 AC
i Acinonyx_jubatus.LLWD01001279.1                        I 1 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507372 2 -  29979442 aa
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 1 C 0
s Ailurus_fulgens.LNAC01001112.1                             75949 2 -    347723 ga
i Ailurus_fulgens.LNAC01001112.1                         I 1 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     65328 2 -     89534 TG
i Allactaga_bullata.AllBul_scaffold_9566                 I 2 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9973 2 -     52922 AA
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9904 2 -     28001 AA
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                           350 2 -     18505 AA
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           1199 2 -     12518 AA
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675728 2 -   2318259 GA
i Ammotragus_lervia.NIVO01071767.1                       I 1 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183459 2 +    412891 AA
i Anoura_caudifer.AnoCau_scaffold_1412                   I 1 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             98210 2 -    100397 GA
i Antilocapra_americana.AntAmePen_scaffold_12469         I 1 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7630 2 +     20879 GA
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14789 2 +     17124 CA
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2816 2 +     43469 AA
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 1 C 0
s Avahi_laniger.k141_765380                                  49666 2 -     92717 CA
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              50291 2 +     85213 CA
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191955 2 +  23207421 AA
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2420 2 -     18090 AA
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26650 2 +     34529 GA
i Beatragus_hunteri.BeaHun_scaffold_50177                I 1 C 0
s Bison_bison.KN261452.1                                    199707 2 -    288883 ga
i Bison_bison.KN261452.1                                 I 1 C 0
s Bos_indicus.CM003047.1                                  20272912 2 +  48749331 Ga
i Bos_indicus.CM003047.1                                 I 1 C 0
s Bos_mutus.JH880303.1                                     1125468 2 -   1948126 ga
i Bos_mutus.JH880303.1                                   I 1 C 0
s Bos_taurus.CM000203.6                                   18083550 2 +  45695690 ga
i Bos_taurus.CM000203.6                                  I 1 C 0
s Bubalus_bubalis.KI419123.1                               2819217 2 +   4408762 ga
i Bubalus_bubalis.KI419123.1                             I 1 C 0
s Camelus_bactrianus.KN276810.1                            9999264 2 -  17673402 AA
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331728 2 -   7040546 AA
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  400004 2 -   1652518 AA
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17796121 2 -  60362399 AA
i CanFam4.chr16                                          I 1 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182178 2 -    185531 AA
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 1 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031564 2 -   9314153 aa
i Canis_lupus_dingo.QKWQ01000480.1                       I 1 C 0
s Canis_lupus_familiaris.chr16                            17955829 2 -  59632846 aa
i Canis_lupus_familiaris.chr16                           I 1 C 0
s Canis_lupus_orion.HG994398.1                            18497129 2 +  63665305 aa
i Canis_lupus_orion.HG994398.1                           I 1 C 0
s Capra_aegagrus.CM003241.1                               18829846 2 +  46296322 GA
i Capra_aegagrus.CM003241.1                              I 1 C 0
s Capra_hircus.CM004588.1                                 18060566 2 -  44709034 GA
i Capra_hircus.CM004588.1                                I 1 C 0
s Carlito_syrichta.NW_007259797.1                           141410 2 -    496798 aa
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                3233 2 -     11696 AA
i Carollia_perspicillata.CarPer_scaffold_92756           I 1 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133996 2 +    179628 AA
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89609 2 +    217609 AA
i Catagonus_wagneri.CatWag_scaffold_2839                 I 1 C 0
s Cavia_aperea.AVPZ01000300.1                             18348010 2 -  23392119 AA
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18360270 2 -  23407841 AA
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        99144 2 +    143979 AA
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         5325 2 -      8605 AA
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12228246 2 +  27778364 aa
i Ceratotherium_simum.JH767749.1                         I 1 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2964 2 -      3715 AA
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     I 1 C 0
s Cercocebus_atys.KQ010504.1                               4470933 2 +   4669795 aa
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         9482 2 -     19203 AA
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3903 2 +      8260 AA
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           4131 2 +     27781 AA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         4289 2 -     20310 AA
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           7273 2 +     29689 AA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            1711 2 +      9989 AA
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9957 2 -     27936 AA
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9983 2 -     11289 AA
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38812355 2 +  39242232 AA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21218054 2 -  21565898 AA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       35173 2 -     53127 AA
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        2458 2 +      7159 AA
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9976 2 -     27947 AA
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9952 2 +     17596 AA
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         40452 2 -     41420 AA
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            5143 2 -      6351 AA
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             17082 2 -     52598 CA
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12432 2 +     57038 CA
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1251348 2 +   2543920 AA
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18423915 2 -  18827391 AA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       10356 2 -     50209 AA
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135417364 2 + 135778131 aa
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15521 2 +     19366 AA
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170620 2 +    839153 aa
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1905890 2 +   2368649 aa
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199945560 2 + 200372422 AA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              32431 2 +     84244 AA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17546661 2 -  53390261 aa
i Condylura_cristata.JH655891.1                          I 8 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10873 2 -     20389 AA
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 1 C 0
s Crocidura_indochinensis.CroInd_scaffold_287352               877 2 +      4208 AA
i Crocidura_indochinensis.CroInd_scaffold_287352         I 9 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24820 2 -     87169 AA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 1 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 3419 2 +      5455 AA
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1772 2 +      3576 AA
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            61412 2 +   2246927 AA
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12533253 2 -  12879189 CA
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811590 2 +  35494412 AA
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8628265 2 +  20541912 aa
i Desmodus_rotundus.KZ672289.1                           I 1 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  670094 2 +   1390856 aa
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 1 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2854 2 +    198055 AA
i Diceros_bicornis.DicBicMic_scaffold_5955               I 1 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34833 2 +     67921 AA
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18896158 2 +  37912305 AA
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  12376 2 +     14536 AA
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 32020 2 -     42551 AA
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE759718.1                                   7778 2 +     11740 aa
i Eidolon_helvum.KE759718.1                              I 1 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310881 2 +    607251 ga
i Elaphurus_davidianus.JRFZ01104969.1                    I 1 C 0
s Enhydra_lutris.KZ291758.1                               16326136 2 -  41312741 aa
i Enhydra_lutris.KZ291758.1                              I 1 C 0
s Eptesicus_fuscus.JH977646.1                              2144420 2 -  14770903 aa
i Eptesicus_fuscus.JH977646.1                            I 1 C 0
s Equus_asinus.JREZ01000139.1                              1280133 2 +   4378816 Aa
i Equus_asinus.JREZ01000139.1                            I 1 C 0
s Equus_caballus.CM000403.2                               18527954 2 -  39960074 Aa
i Equus_caballus.CM000403.2                              I 1 C 0
s Equus_przewalskii.KK951119.1                               29969 2 +    498745 Aa
i Equus_przewalskii.KK951119.1                           I 1 C 0
s Erinaceus_europaeus.JH835339.1                           3325841 2 -   7059049 aa
i Erinaceus_europaeus.JH835339.1                         I 175 C 0
s Erythrocebus_patas.Contig38                             21200546 2 -  21539334 AA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11266 2 +    133382 AA
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             25203 2 -     44125 AA
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Eulemur_albifrons.k141_342033                               9763 2 -     14127 CA
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                2461 2 -     16928 CA
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              11494 2 -     25546 CA
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             8679 2 +     26330 CA
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                  9936 2 +     23973 CA
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 8679 2 +     75513 CA
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  6631 2 +     97555 CA
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                             9557 2 +     26496 CA
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                   163 2 -     17153 CA
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                               9742 2 +    111500 CA
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20233778 2 + 206538554 Ag
i Felis_catus.CM001381.2                                 I 1 C 0
s Felis_catus_fca126.CM031415.1                           20192626 2 + 205367284 ag
i Felis_catus_fca126.CM031415.1                          I 1 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  6137 2 -     36744 AG
i Felis_nigripes.FelNig_flattened_line_20823             I 1 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25818 2 +     26054 AA
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     608846 2 -    660261 ga
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 1 C 0
s Glis_glis.GliGli_scaffold_19807                            30702 2 +     49224 AA
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              11228 2 -     32273 AA
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186333376 2 + 186649187 Aa
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   30426 2 +     78134 GA
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           2827 2 -     19426 CA
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              7971 2 -     15286 CA
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                              9609 2 +     18253 CA
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                          9712 2 -     41752 CA
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                          9545 2 -     16460 CA
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238744 2 +    327341 AG
i Helogale_parvula.HelPar_flattened_line_2585            I 1 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18050 2 +     36099 GA
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 1 C 0
s Heterocephalus_glaber.JH602082.1                        20659908 2 +  22651954 AA
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112403 2 +    128679 AA
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108647 2 +   1711038 aa
i Hipposideros_armiger.JXIK01000431.1                    I 1 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               40088 2 +     43066 AA
i Hipposideros_galeritus.HipGal_scaffold_29171           I 1 C 0
s Hoolock_leuconedys.ctg274                                    430123 2 +    630532 AA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  41268 2 +     55795 AA
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 1 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20396 2 -    143317 AA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_307679                               13054 2 -     15490 AA
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              55059 2 +     67168 AA
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189538709 2 - 191637585 AA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3331602 2 -  11177569 AA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      81492 2 +    135385 AG
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514950 2 -   7955117 aa
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   18528 2 +     31101 CA
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22807 2 +     23964 AA
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271716 2 -   9596543 TG
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                2169 2 -      3359 AA
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    12845 2 -     42476 AA
i Lasiurus_borealis.LasBor_scaffold_32767                I 1 C 0
s Lemur_catta.scaffold_24                                 15520071 2 -  30322482 CA
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6983 2 -     23766 CA
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24930 2 +     45836 CA
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31843 2 -     32627 CA
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      22985 2 +     54090 CA
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3036470 2 +   3914936 aa
i Leptonychotes_weddellii.KB714746.1                     I 1 C 0
s Lipotes_vexillifer.KE559953.1                             267859 2 -    662738 AA
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1432477 2 +   1826925 AA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            1050 2 +     11245 CA
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999887 2 +   6120653 CA
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17952069 2 -  59628241 aa
i Lycaon_pictus.CM007581.1                               I 1 C 0
s Macaca_arctoides.k141_2326796                               2298 2 +     40492 AA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59671553 2 +  60120075 AA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  8053 2 -     26193 AA
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75850 2 -    114318 AA
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  1565 2 -     23192 AA
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                11018 2 -     29190 AA
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  19585 2 +     37952 AA
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834673 2 + 187317192 aa
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25453236 2 -  25927173 aa
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  75434 2 +     89720 AA
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 2432 2 +     20474 AA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   2233 2 -     14993 AA
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  325105 2 -    668171 AA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                  536 2 -     24072 AA
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               21172 2 -     45290 AA
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87884 2 +     94391 AA
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 1 C 0
s Mandrillus_leucophaeus.scaffold280                      23932721 2 -  24302211 AA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346898 2 +    752769 AA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15956 2 +    737560 aa
i Manis_javanica.JSZB01003497.1                          I 1 C 0
s Manis_pentadactyla.KN006162.1                              47345 2 -    317179 aa
i Manis_pentadactyla.KN006162.1                          I 1 C 0
s Marmota_marmota.CZRN01000018.1                          33097800 2 -  40650429 aa
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         7154 2 -    207569 AA
i Megaderma_lyra.MegLyr_scaffold_4542                    I 1 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6849 2 +     13704 AA
i Mellivora_capensis.MelCap_flattened_line_69365         I 1 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3475 2 +     10310 AA
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18287467 2 -  93316391 ca
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13776 2 -     19307 AA
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 1 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849467 2 +   8254450 AA
i Miniopterus_natalensis.LDJU01000034.1                  I 1 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             33344 2 +     64694 AA
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 1 C 0
s Miopithecus_ogouensis.k141_534055                           4471 2 -     28506 AA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62800 2 -     63350 AA
i Mirounga_angustirostris.MirAng_flattened_line_22144    I 1 C 0
s Mirza_zaza.k141_952172                                      5035 2 -     37649 CA
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26980 2 -    437263 AA
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138179 2 -    366855 AA
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 1 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                    932 2 +     82753 GA
i Moschus_moschiferus.MosMos_scaffold_13123              I 1 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31975 2 +     37127 AG
i Mungos_mungo.MunMun_flattened_line_23663               I 1 C 0
s Murina_feae.MurFea_scaffold_85699                           5492 2 +     14753 AA
i Murina_feae.MurFea_scaffold_85699                      I 1 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2695 2 +     14296 AA
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               298034 2 -  14710649 aa
i Mustela_putorius.JH418006.1                            I 1 C 0
s Myotis_brandtii.KE162005.1                                278664 2 -  10118263 aa
i Myotis_brandtii.KE162005.1                             I 1 C 0
s Myotis_davidii.KB100139.1                                1586219 2 -   6019432 aa
i Myotis_davidii.KB100139.1                              I 1 I 143
s Myotis_lucifugus.GL429869.1                              3902428 2 -   4330536 aa
i Myotis_lucifugus.GL429869.1                            I 1 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32988 2 +     33610 AA
i Myotis_myotis.MyoMyo_scaffold_28916                    I 1 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186472 2 +    196477 AA
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025857 2 -   3037898 AA
i Nannospalax_galili.KL204047.1                          C 0 I 104
s Nasalis_larvatus.k141_413338                               10471 2 +     21681 AA
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865936 2 +   7148211 AA
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756739 2 +    783361 AA
i Noctilio_leporinus.NocLep_scaffold_251                 I 1 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146330 2 -   9404916 aa
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 1 C 0
s Nycticebus_bengalensis.LG01                            102574850 2 - 196305487 CA
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2536 2 +      8486 CA
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105745277 2 + 199412804 CA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                              501087 2 -   2017862 aa
i Odobenus_rosmarus.KB229312.1                           I 1 C 0
s Odocoileus_virginianus.KZ100018.1                         145252 2 +    630418 Ga
i Odocoileus_virginianus.KZ100018.1                      I 1 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          76763 2 -    150152 ga
i Okapia_johnstoni.LVCL01S0005463.1                      I 1 C 0
s Orcinus_orca.KB316932.1                                  2781851 2 -  10937097 AA
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       459083 2 -    559221 aa
i Otocyon_megalotis.JAEUCK010005147.1                    I 1 C 0
s Ovis_aries.CM001607.2                                   17586025 2 +  44047080 ga
i Ovis_aries.CM001607.2                                  I 1 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      174002 2 -    191736 GA
i Ovis_canadensis.OviCan_scaffold_2572                   I 1 C 0
s Pan_paniscus.KQ411613.1                                    39345 2 +     80009 aa
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03001836.1                             25262 2 +     51860 Aa
i Pan_troglodytes.NBAG03001836.1                         C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  147782 2 +    230217 AG
i Panthera_onca.PanOnc_flattened_line_3271               I 1 C 0
s Panthera_pardus.KV860321.1                                260990 2 +  18783137 Ag
i Panthera_pardus.KV860321.1                             I 1 C 0
s Panthera_tigris.KE722367.1                               4717628 2 -   8748460 Ag
i Panthera_tigris.KE722367.1                             I 1 C 0
s Pantholops_hodgsonii.KE114653.1                          1264935 2 -   2937107 GA
i Pantholops_hodgsonii.KE114653.1                        I 1 C 0
s Papio_anubis.CM001495.2                                183438506 2 + 183742232 aa
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             2199 2 +     20448 GA
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20559004 2 +  20919399 AA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                    942 2 +     41871 AA
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     4228 2 +     27711 AA
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  4313 2 +      9205 AA
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9461 2 -     78924 AA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 1 C 0
s Perodicticus_ibeanus.k141_855320                            5025 2 +     13100 CA
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             3393 2 +     25941 CA
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     26671 2 -     29689 AA
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8898 2 +     63832 AA
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38983 2 +     62158 AA
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33705 2 +     89929 AA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            35121 2 +     51399 AA
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14291357 2 -  14605196 aa
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              796 2 +     22620 AA
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 1 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34604 2 +     35617 AA
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189126433 2 + 189387572 aa
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9566039 2 +   9816681 AA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68632 2 -     81375 AA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                               453 2 +     19060 AA
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2592724 2 -   4620579 CA
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986737 2 +   2598838 cg
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          25026 2 +     38485 CG
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             1185 2 +      4256 CG
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22545 2 +     35766 CG
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            728 2 -     24134 CG
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24540 2 -     67325 CG
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            785 2 -      6182 CG
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11573 2 -     21811 Ta
i Pteronotus_parnellii.KE909381.1                        I 1 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         37045 2 +     42204 AA
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 1 C 0
s Pteropus_alecto.KB030862.1                              22974046 2 +  28871421 aa
i Pteropus_alecto.KB030862.1                             I 1 C 0
s Pteropus_vampyrus.KN534172.1                                1984 2 -      8028 aa
i Pteropus_vampyrus.KN534172.1                           I 1 C 0
s Puma_concolor.QAVW01001104.1                            20270922 2 -  38429054 AC
i Puma_concolor.QAVW01001104.1                           I 1 C 0
s Pygathrix_cinerea.k141_1153803                             10464 2 -     91421 AA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7604592 2 +   7812017 AA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10433 2 -     72585 AA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5500 2 +     55207 GA
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 1 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        367194 2 -   3329780 aa
i Rhinolophus_sinicus.LVEH01000134.1                     I 1 C 0
s Rhinopithecus_bieti.k119_217274                             2148 2 -     11128 AA
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91231503 2 - 195417433 aa
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7667152 2 +   7961872 AA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85031 2 -     96226 AA
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 1 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151720 2 -    313613 CA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 8 C 0
s Semnopithecus_entellus.k141_11662                          14976 2 -     19888 AA
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      22178 2 +     39453 AA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2704 2 +     27826 AA
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             2225 2 -     19483 AA
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      2287 2 +      7198 AA
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         10547 2 +     15514 AA
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            188035 2 -    191337 AA
i Solenodon_paradoxus.SolPar_flattened_line_5840         I 2 C 0
s Sorex_araneus.JH798187.1                                13648203 2 -  18376816 aa
i Sorex_araneus.JH798187.1                               I 2 C 0
s Spermophilus_dauricus.KZ294078.1                         1948588 2 -   3870691 aa
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27579 2 +     97271 GA
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 1 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14883 2 -    196729 AG
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 C 0
s Sus_scrofa.CM000828.4                                   62882827 2 -  69701581 At
i Sus_scrofa.CM000828.4                                  I 1 C 0
s Symphalangus_syndactylus.tarseq_199                      1088753 2 -   1523678 AA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 7185 2 +     41958 AA
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 1 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69826 2 +    116680 AA
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115576 2 -    156842 AA
i Tapirus_indicus.TapInd_scaffold_9301                   I 1 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    384030 2 +    539355 AA
i Tapirus_terrestris.TapTer_scaffold_755                 I 1 C 0
s Tarsius_lariang.k141_2201908                               11024 2 +     70052 AA
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               15329 2 +     25099 AA
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186423550 2 + 186847797 aa
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103806 2 +    114563 AA
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   2203 2 +      8208 AA
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     79321 2 +    610378 AA
i Tonatia_saurophila.TonSau_scaffold_294                 I 1 C 0
s Trachypithecus_auratus.k141_722599                          6278 2 -     20410 AA
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    10474 2 +     15221 AA
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        6379 2 +     19930 AA
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2809 2 -     19997 AA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42928 2 -     60166 AA
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        10401 2 -     27529 AA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     10341 2 -     18194 AA
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           4076 2 -     21137 AA
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2779 2 -     10723 AA
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1931 2 +      9834 AA
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        20249 2 +     32220 AA
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5934346 2 +   6242583 AA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        3593 2 +     20839 AA
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                   1158 2 -      1748 GG
i Tragulus_javanicus.TraJav_scaffold_140459              I 1 C 0
s Tupaia_chinensis.KB320699.1                              2150773 2 +   4065304 Ta
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     4071 2 -     10553 TA
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15738098 2 +  33153633 AA
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Ursus_maritimus.KK499267.1                               4847287 2 -   5085361 AA
i Ursus_maritimus.KK499267.1                             I 1 C 0
s Varecia_rubra.k141_590885                                   7412 2 +     50397 CA
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              7460 2 +     24756 CA
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368755 2 -   5488506 AA
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7744 2 -     43706 AA
i Vulpes_lagopus.VulLag_flattened_line_30954             I 1 C 0
s Xerus_inauris.XerIna_scaffold_48378                        20090 2 -     24430 AA
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          2209 2 +      2932 aa
i Zalophus_californianus.ZalCal_flattened_line_63728     I 1 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      10859 2 +     63895 AG
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11790 2 +     12536 AA
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906 0 -     10935 C
e Uropsilus_gracilis.UroGra_scaffold_97021                    2273 0 -      4736 I
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Procavia_capensis.ProCapCap_scaffold_85530                 10240 0 -     22811 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25636 0 +     32600 C
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1358995 0 +   3988456 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Loxodonta_africana.GL010049.1                            4214777 0 -  43346337 C
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491 0 +       961 C
e Galagoides_demidoff.k141_31856                              3217 0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089268 0 +  10337057 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1995 2 +     62944 TC
s Acinonyx_jubatus.LLWD01001279.1                           823926 2 -   1699592 TC
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507374 2 -  29979442 tc
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             75951 2 -    347723 ta
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     65330 1 -     89534 T-
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 27
s Allenopithecus_nigroviridis.k141_3361533                    9975 2 -     52922 TC
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9906 2 -     28001 TC
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                           352 2 -     18505 TC
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           1201 2 -     12518 TC
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675730 2 -   2318259 TC
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183461 2 +    412891 TC
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             98212 2 -    100397 TC
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7632 1 +     20879 C-
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 9
s Arctocebus_calabarensis.k141_288239                        14791 2 +     17124 GC
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2818 2 +     43469 GC
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  49668 2 -     92717 TC
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              50293 2 +     85213 TC
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191957 2 +  23207421 TC
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2422 2 -     18090 TC
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26652 2 +     34529 TC
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    199709 2 -    288883 tc
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20272914 2 +  48749331 tc
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1125470 2 -   1948126 tc
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18083552 2 +  45695690 tc
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2819219 2 +   4408762 tc
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9999266 2 -  17673402 TC
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331730 2 -   7040546 TC
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  400006 2 -   1652518 TC
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17796123 2 -  60362399 TC
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182180 2 -    185531 TC
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031566 2 -   9314153 tc
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955831 2 -  59632846 tc
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18497131 2 +  63665305 tc
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18829848 2 +  46296322 TC
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18060568 2 -  44709034 TC
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           141412 2 -    496798 tc
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                3235 2 -     11696 TC
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    133998 1 +    179628 T-
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 2
s Catagonus_wagneri.CatWag_scaffold_2839                     89611 2 +    217609 TC
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18348012 1 -  23392119 T-
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18360272 1 -  23407841 T-
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        99146 1 +    143979 T-
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         5327 2 -      8605 TC
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12228248 2 +  27778364 tc
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2966 2 -      3715 TC
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470935 2 +   4669795 tc
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         9484 2 -     19203 TC
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3905 2 +      8260 TC
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           4133 2 +     27781 TC
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         4291 2 -     20310 TC
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           7275 2 +     29689 TC
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            1713 2 +      9989 TC
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9959 2 -     27936 TC
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9985 2 -     11289 TC
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38812357 2 +  39242232 TC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21218056 2 -  21565898 TC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       35175 2 -     53127 TC
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        2460 2 +      7159 TC
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9978 2 -     27947 TC
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9954 2 +     17596 TC
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         40454 2 -     41420 TC
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            5145 2 -      6351 TG
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             17084 2 -     52598 TC
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12434 2 +     57038 TC
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1251350 1 +   2543920 T-
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18423917 2 -  18827391 TC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       10358 2 -     50209 TC
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135417366 2 + 135778131 tc
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15523 2 +     19366 TG
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170622 2 +    839153 tg
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1905892 2 +   2368649 tc
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199945562 2 + 200372422 TC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              32433 2 +     84244 TC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17546663 2 -  53390261 tt
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10875 2 -     20389 TC
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_287352               879 2 +      4208 GT
i Crocidura_indochinensis.CroInd_scaffold_287352         C 0 I 37
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24822 2 -     87169 TC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 3421 1 +      5455 T-
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1774 1 +      3576 T-
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            61414 2 +   2246927 tg
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12533255 2 -  12879189 TC
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811592 2 +  35494412 TC
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8628267 2 +  20541912 tc
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  670096 2 +   1390856 tc
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2856 2 +    198055 TC
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34835 1 +     67921 T-
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18896160 1 +  37912305 C-
i Dipodomys_ordii.KN672350.1                             C 0 I 1
s Dipodomys_stephensi.DipSte_scaffold_75855                  12378 1 +     14536 C-
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 I 1
s Dolichotis_patagonum.DolPat_scaffold_30833                 32022 1 -     42551 T-
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE759718.1                                   7780 2 +     11740 tt
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310883 2 +    607251 tc
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Enhydra_lutris.KZ291758.1                               16326138 2 -  41312741 tc
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144422 1 -  14770903 -c
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1280135 2 +   4378816 tc
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527956 2 -  39960074 tc
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29971 2 +    498745 tc
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3325843 2 -   7059049 ct
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21200548 2 -  21539334 TC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11268 2 +    133382 TC
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             25205 2 -     44125 TC
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Eulemur_albifrons.k141_342033                               9765 2 -     14127 TT
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                2463 2 -     16928 TT
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              11496 2 -     25546 TT
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             8681 2 +     26330 TT
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                  9938 2 +     23973 TT
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 8681 2 +     75513 TT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  6633 2 +     97555 TT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                             9559 2 +     26496 TT
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                   165 2 -     17153 TT
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                               9744 2 +    111500 TT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20233780 2 + 206538554 tc
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20192628 2 + 205367284 tc
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  6139 2 -     36744 TC
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25820 2 +     26054 TC
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     608848 2 -    660261 tc
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30704 1 +     49224 T-
i Glis_glis.GliGli_scaffold_19807                        C 0 I 2
s Gorilla_beringei.k141_3596273                              11230 2 -     32273 TC
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186333378 2 + 186649187 tc
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   30428 1 +     78134 T-
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 2
s Hapalemur_alaotrensis.k141_170648                           2829 2 -     19426 TT
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              7973 2 -     15286 TT
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                              9611 2 +     18253 TT
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                          9714 2 -     41752 TT
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                          9547 2 -     16460 TT
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238746 2 +    327341 TA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18052 2 +     36099 TC
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20659910 1 +  22651954 T-
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112405 2 +    128679 TC
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108649 2 +   1711038 cc
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               40090 2 +     43066 TC
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    430125 2 +    630532 TC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  41270 2 +     55795 TC
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 3
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20398 1 -    143317 T-
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_307679                               13056 2 -     15490 TC
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              55061 2 +     67168 TC
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189538711 2 - 191637585 TC
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3331604 2 -  11177569 TC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      81494 1 +    135385 T-
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7514952 1 -   7955117 t-
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 2
s Indri_indri.k141_3655594                                   18530 2 +     31101 TC
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22809 2 +     23964 TC
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271718 1 -   9596543 C-
i Jaculus_jaculus.JH725527.1                             C 0 I 23
s Kogia_breviceps.KogBre_flattened_line_192630                2171 2 -      3359 TC
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    12847 1 -     42476 -C
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15520073 2 -  30322482 TT
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6985 2 -     23766 TC
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24932 2 +     45836 TC
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31845 2 -     32627 TC
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      22987 2 +     54090 TC
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3036472 2 +   3914936 tc
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             267861 2 -    662738 TC
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1432479 2 +   1826925 TC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            1052 2 +     11245 GC
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999889 2 +   6120653 GC
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17952071 2 -  59628241 tc
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               2300 2 +     40492 TC
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59671555 2 +  60120075 TC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  8055 2 -     26193 TC
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75852 2 -    114318 TC
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  1567 2 -     23192 TC
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                11020 2 -     29190 TC
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  19587 2 +     37952 TC
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834675 2 + 187317192 tc
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25453238 2 -  25927173 tc
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  75436 2 +     89720 TC
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 2434 2 +     20474 TC
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   2235 2 -     14993 TC
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  325107 2 -    668171 TC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                  538 2 -     24072 TC
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               21174 2 -     45290 TC
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23932723 2 -  24302211 TC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346900 2 +    752769 TC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15958 2 +    737560 tt
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              47347 2 -    317179 tt
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097802 1 -  40650429 t-
i Marmota_marmota.CZRN01000018.1                         C 0 I 2
s Megaderma_lyra.MegLyr_scaffold_4542                         7156 2 -    207569 TC
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6851 2 +     13704 TC
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3477 2 +     10310 TC
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18287469 2 -  93316391 tc
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13778 2 -     19307 TC
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849469 2 +   8254450 TC
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 200
s Miniopterus_schreibersii.MinSch_scaffold_18080             33346 2 +     64694 TC
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           4473 2 -     28506 TC
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62802 2 -     63350 TC
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 C 0
s Mirza_zaza.k141_952172                                      5037 2 -     37649 TC
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26982 2 -    437263 TC
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138181 2 -    366855 TC
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                    934 2 +     82753 TC
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31977 2 +     37127 TA
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5494 2 +     14753 TC
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2697 1 +     14296 T-
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 2
s Mustela_putorius.JH418006.1                               298036 2 -  14710649 tc
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                278666 2 -  10118263 tc
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1586364 2 -   6019432 ta
i Myotis_davidii.KB100139.1                              I 143 C 0
s Myotis_lucifugus.GL429869.1                              3902430 2 -   4330536 tc
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32990 2 +     33610 TC
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186474 2 +    196477 TG
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025963 1 -   3037898 t-
i Nannospalax_galili.KL204047.1                          I 104 C 0
s Nasalis_larvatus.k141_413338                               10473 2 +     21681 TC
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865938 2 +   7148211 TC
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756741 2 +    783361 TC
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146332 2 -   9404916 tc
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102574852 2 - 196305487 GC
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2538 2 +      8486 GC
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105745279 2 + 199412804 GC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1358995 1 +   3988456 -T
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              501089 2 -   2017862 tc
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         145254 2 +    630418 tc
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          76765 2 -    150152 tc
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  2781853 2 -  10937097 TC
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       459085 2 -    559221 tc
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17586027 2 +  44047080 tc
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      174004 2 -    191736 TC
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    39347 2 +     80009 tc
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03001836.1                             25264 2 +     51860 tc
i Pan_troglodytes.NBAG03001836.1                         C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  147784 2 +    230217 TC
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                260992 2 +  18783137 tc
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4717630 2 -   8748460 tc
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1264937 2 -   2937107 TC
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183438508 2 + 183742232 tc
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             2201 2 +     20448 TC
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20559006 2 +  20919399 TC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                    944 2 +     41871 TC
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     4230 2 +     27711 TC
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  4315 2 +      9205 TC
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9463 2 -     78924 TC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            5027 2 +     13100 GC
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             3395 2 +     25941 GC
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     26673 1 -     29689 T-
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8900 2 +     63832 TC
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38985 2 +     62158 TC
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33707 2 +     89929 TC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            35123 2 +     51399 TC
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14291359 2 -  14605196 tc
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              798 1 +     22620 -C
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34606 2 +     35617 TC
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189126435 2 + 189387572 tc
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9566041 2 +   9816681 TC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68634 2 -     81375 TC
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                               455 2 +     19060 TC
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2592726 2 -   4620579 TT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986739 2 +   2598838 tc
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          25028 2 +     38485 TC
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             1187 2 +      4256 TC
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22547 2 +     35766 TC
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            730 2 -     24134 TC
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24542 2 -     67325 TC
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            787 2 -      6182 TC
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11575 2 -     21811 tc
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         37047 2 +     42204 TC
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22974048 2 +  28871421 tt
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1986 2 -      8028 tt
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20270924 2 -  38429054 TC
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             10466 2 -     91421 TC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7604594 2 +   7812017 TC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10435 2 -     72585 TC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5502 2 +     55207 TC
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        367196 2 -   3329780 tc
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             2150 2 -     11128 TC
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91231505 2 - 195417433 tc
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7667154 2 +   7961872 TC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85033 2 -     96226 TT
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151722 2 -    313613 TT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          14978 2 -     19888 TC
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      22180 2 +     39453 TC
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2706 2 +     27826 TC
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             2227 2 -     19483 TC
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      2289 2 +      7198 TC
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         10549 2 +     15514 TC
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            188037 2 -    191337 TT
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13648205 2 -  18376816 at
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1948590 1 -   3870691 t-
i Spermophilus_dauricus.KZ294078.1                       C 0 I 2
s Spilogale_gracilis.SpiGra_flattened_line_13525             27581 2 +     97271 TC
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14885 2 -    196729 TA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   62882829 2 -  69701581 cg
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1088755 2 -   1523678 TC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 7187 2 +     41958 TC
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69828 2 +    116680 TG
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115578 2 -    156842 TC
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    384032 2 +    539355 TC
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               11026 2 +     70052 TC
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               15331 2 +     25099 TC
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186423552 2 + 186847797 tc
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103808 1 +    114563 T-
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   2205 2 +      8208 TG
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     79323 2 +    610378 TC
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          6280 2 -     20410 TC
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    10476 2 +     15221 TC
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        6381 2 +     19930 TC
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2811 2 -     19997 TC
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42930 2 -     60166 TC
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        10403 2 -     27529 TC
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     10343 2 -     18194 TC
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           4078 2 -     21137 TC
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2781 2 -     10723 TC
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1933 2 +      9834 TC
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        20251 2 +     32220 TC
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5934348 2 +   6242583 TC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        3595 2 +     20839 TC
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                   1160 2 -      1748 TC
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 C 0
s Tupaia_chinensis.KB320699.1                              2150775 2 +   4065304 tc
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     4073 2 -     10553 TC
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15738100 2 +  33153633 TC
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Ursus_maritimus.KK499267.1                               4847289 2 -   5085361 TC
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   7414 2 +     50397 TC
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              7462 2 +     24756 TC
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368757 2 -   5488506 TC
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7746 2 -     43706 TC
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        20092 1 -     24430 T-
i Xerus_inauris.XerIna_scaffold_48378                    C 0 I 2
s Zalophus_californianus.ZalCal_flattened_line_63728          2211 2 +      2932 tc
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      10861 1 +     63895 T-
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11792 2 +     12536 TC
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906 0 -     10935 C
e Uropsilus_gracilis.UroGra_scaffold_97021                    2273 0 -      4736 I
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Procavia_capensis.ProCapCap_scaffold_85530                 10240 0 -     22811 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25636 0 +     32600 C
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Macroglossus_sobrinus.MacSob_scaffold_8222                 87886 0 +     94391 C
e Loxodonta_africana.GL010049.1                            4214777 0 -  43346337 C
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491 0 +       961 C
e Galagoides_demidoff.k141_31856                              3217 0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089268 0 +  10337057 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1997 1 +     62944 A
s Acinonyx_jubatus.LLWD01001279.1                           823928 1 -   1699592 A
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507376 1 -  29979442 a
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             75953 1 -    347723 a
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9977 1 -     52922 A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9908 1 -     28001 A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                           354 1 -     18505 A
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           1203 1 -     12518 A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675732 1 -   2318259 A
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183463 1 +    412891 A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             98214 1 -    100397 A
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14793 1 +     17124 A
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2820 1 +     43469 A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  49670 1 -     92717 T
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              50295 1 +     85213 T
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191959 1 +  23207421 A
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2424 1 -     18090 A
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26654 1 +     34529 A
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    199711 1 -    288883 a
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20272916 1 +  48749331 a
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1125472 1 -   1948126 a
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18083554 1 +  45695690 a
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2819221 1 +   4408762 a
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9999268 1 -  17673402 A
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331732 1 -   7040546 A
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  400008 1 -   1652518 A
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17796125 1 -  60362399 A
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182182 1 -    185531 A
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031568 1 -   9314153 a
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955833 1 -  59632846 a
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18497133 1 +  63665305 a
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18829850 1 +  46296322 A
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18060570 1 -  44709034 A
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           141414 1 -    496798 a
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                3237 1 -     11696 A
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89613 1 +    217609 C
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         5329 1 -      8605 A
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12228250 1 +  27778364 a
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2968 1 -      3715 A
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470937 1 +   4669795 a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         9486 1 -     19203 A
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3907 1 +      8260 A
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           4135 1 +     27781 A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         4293 1 -     20310 A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           7277 1 +     29689 A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            1715 1 +      9989 A
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9961 1 -     27936 A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9987 1 -     11289 A
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38812359 1 +  39242232 A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21218058 1 -  21565898 A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       35177 1 -     53127 A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        2462 1 +      7159 A
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9980 1 -     27947 A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9956 1 +     17596 A
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         40456 1 -     41420 A
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            5147 1 -      6351 A
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             17086 1 -     52598 A
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12436 1 +     57038 A
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chlorocebus_aethiops.ctg25                              18423919 1 -  18827391 A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       10360 1 -     50209 A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135417368 1 + 135778131 a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15525 1 +     19366 A
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170624 1 +    839153 a
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1905894 1 +   2368649 a
i Colobus_angolensis.KN981557.1                          C 0 I 11
s Colobus_guereza.LG01                                   199945564 1 + 200372422 A
i Colobus_guereza.LG01                                   C 0 I 11
s Colobus_polykomos.k141_906115                              32435 1 +     84244 A
i Colobus_polykomos.k141_906115                          C 0 I 11
s Condylura_cristata.JH655891.1                           17546665 1 -  53390261 a
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10877 1 -     20389 A
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24824 1 -     87169 A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            61416 1 +   2246927 a
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12533257 1 -  12879189 A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811594 1 +  35494412 A
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8628269 1 +  20541912 a
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  670098 1 +   1390856 a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2858 1 +    198055 A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE759718.1                                   7782 1 +     11740 a
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310885 1 +    607251 a
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Enhydra_lutris.KZ291758.1                               16326140 1 -  41312741 a
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144423 1 -  14770903 a
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1280137 1 +   4378816 a
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527958 1 -  39960074 a
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29973 1 +    498745 a
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3325845 1 -   7059049 a
i Erinaceus_europaeus.JH835339.1                         C 0 I 652
s Erythrocebus_patas.Contig38                             21200550 1 -  21539334 A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11270 1 +    133382 A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             25207 1 -     44125 A
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Eulemur_albifrons.k141_342033                               9767 1 -     14127 G
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                2465 1 -     16928 G
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              11498 1 -     25546 G
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             8683 1 +     26330 G
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                  9940 1 +     23973 G
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 8683 1 +     75513 G
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  6635 1 +     97555 G
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                             9561 1 +     26496 G
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                   167 1 -     17153 G
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                               9746 1 +    111500 G
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20233782 1 + 206538554 a
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20192630 1 + 205367284 a
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  6141 1 -     36744 A
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25822 1 +     26054 A
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     608850 1 -    660261 a
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Gorilla_beringei.k141_3596273                              11232 1 -     32273 A
i Gorilla_beringei.k141_3596273                          C 0 I 50
s Gorilla_gorilla.LT578341.1                             186333380 1 + 186649187 a
i Gorilla_gorilla.LT578341.1                             C 0 I 50
s Hapalemur_alaotrensis.k141_170648                           2831 1 -     19426 G
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              7975 1 -     15286 G
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                              9613 1 +     18253 G
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                          9716 1 -     41752 G
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                          9549 1 -     16460 G
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238748 1 +    327341 A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18054 1 +     36099 A
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112407 1 +    128679 A
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108651 1 +   1711038 a
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               40092 1 +     43066 A
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    430127 1 +    630532 A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  41275 1 +     55795 A
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 3 I 4
s Hylobates_agilis.k141_307679                               13058 1 -     15490 A
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              55063 1 +     67168 A
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189538713 1 - 191637585 A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3331606 1 -  11177569 A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_3655594                                   18532 1 +     31101 A
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22811 1 +     23964 A
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                2173 1 -      3359 A
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    12848 1 -     42476 A
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15520075 1 -  30322482 G
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6987 1 -     23766 A
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24934 1 +     45836 A
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31847 1 -     32627 A
i Lepilemur_ruficaudatus.k141_420445                     C 0 I 49
s Lepilemur_septentrionalis.k141_185316                      22989 1 +     54090 A
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3036474 1 +   3914936 a
i Leptonychotes_weddellii.KB714746.1                     C 0 I 2813
s Lipotes_vexillifer.KE559953.1                             267863 1 -    662738 A
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1432481 1 +   1826925 A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            1054 1 +     11245 A
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999891 1 +   6120653 A
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17952073 1 -  59628241 a
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               2302 1 +     40492 A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59671557 1 +  60120075 A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  8057 1 -     26193 A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75854 1 -    114318 A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  1569 1 -     23192 A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                11022 1 -     29190 A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  19589 1 +     37952 A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834677 1 + 187317192 a
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25453240 1 -  25927173 a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  75438 1 +     89720 A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 2436 1 +     20474 A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   2237 1 -     14993 A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  325109 1 -    668171 A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                  540 1 -     24072 A
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               21176 1 -     45290 A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23932725 1 -  24302211 A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346902 1 +    752769 A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15960 1 +    737560 a
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              47349 1 -    317179 a
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         7158 1 -    207569 A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6853 1 +     13704 A
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3479 1 +     10310 A
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18287471 1 -  93316391 a
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13780 1 -     19307 T
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849671 1 +   8254450 A
i Miniopterus_natalensis.LDJU01000034.1                  I 200 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             33348 1 +     64694 A
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           4475 1 -     28506 A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_22144        62804 1 -     63350 A
i Mirounga_angustirostris.MirAng_flattened_line_22144    C 0 N 0
s Mirza_zaza.k141_952172                                      5039 1 -     37649 A
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26984 1 -    437263 A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138183 1 -    366855 A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                    936 1 +     82753 A
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31979 1 +     37127 A
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5496 1 +     14753 A
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mustela_putorius.JH418006.1                               298038 1 -  14710649 a
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                278668 1 -  10118263 a
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1586366 1 -   6019432 a
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902432 1 -   4330536 a
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        32992 1 +     33610 A
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186476 1 +    196477 A
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nasalis_larvatus.k141_413338                               10475 1 +     21681 A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865940 1 +   7148211 A
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756743 1 +    783361 A
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146334 1 -   9404916 a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102574854 1 - 196305487 A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2540 1 +      8486 A
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105745281 1 + 199412804 A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1358996 1 +   3988456 G
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              501091 1 -   2017862 a
i Odobenus_rosmarus.KB229312.1                           C 0 I 2338
s Odocoileus_virginianus.KZ100018.1                         145256 1 +    630418 a
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          76767 1 -    150152 a
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  2781855 1 -  10937097 A
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       459087 1 -    559221 a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17586029 1 +  44047080 a
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      174006 1 -    191736 A
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    39349 1 +     80009 a
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03001836.1                             25266 1 +     51860 a
i Pan_troglodytes.NBAG03001836.1                         C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  147786 1 +    230217 A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                260994 1 +  18783137 a
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4717632 1 -   8748460 a
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1264939 1 -   2937107 A
i Pantholops_hodgsonii.KE114653.1                        C 0 I 5
s Papio_anubis.CM001495.2                                183438510 1 + 183742232 a
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             2203 1 +     20448 A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20559008 1 +  20919399 A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                    946 1 +     41871 A
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     4232 1 +     27711 A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  4317 1 +      9205 A
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9465 1 -     78924 A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            5029 1 +     13100 A
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             3397 1 +     25941 A
i Perodicticus_potto.k141_1092580                        C 0 I 5
s Phocoena_phocoena.PhoPho_flattened_line_24159               8902 1 +     63832 A
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38987 1 +     62158 A
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33709 1 +     89929 A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            35125 1 +     51399 A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14291361 1 -  14605196 a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              799 1 +     22620 A
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34608 1 +     35617 A
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189126437 1 + 189387572 a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9566043 1 +   9816681 A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68636 1 -     81375 A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                               457 1 +     19060 A
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2592728 1 -   4620579 G
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986741 1 +   2598838 a
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          25030 1 +     38485 A
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             1189 1 +      4256 A
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22549 1 +     35766 A
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            732 1 -     24134 A
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24544 1 -     67325 A
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            789 1 -      6182 A
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11577 1 -     21811 a
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         37049 1 +     42204 A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22974050 1 +  28871421 a
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1988 1 -      8028 a
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20270926 1 -  38429054 A
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             10468 1 -     91421 A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7604596 1 +   7812017 A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10437 1 -     72585 A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5504 1 +     55207 A
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        367198 1 -   3329780 a
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             2152 1 -     11128 A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91231507 1 - 195417433 a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7667156 1 +   7961872 A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85035 1 -     96226 A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151724 1 -    313613 A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          14980 1 -     19888 A
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      22182 1 +     39453 A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2708 1 +     27826 A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             2229 1 -     19483 A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      2291 1 +      7198 A
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         10551 1 +     15514 A
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            188039 1 -    191337 A
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13648207 1 -  18376816 a
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27583 1 +     97271 A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14887 1 -    196729 A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   62882831 1 -  69701581 t
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1088757 1 -   1523678 A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 7189 1 +     41958 A
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69830 1 +    116680 A
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115580 1 -    156842 A
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    384034 1 +    539355 A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               11028 1 +     70052 A
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               15333 1 +     25099 A
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186423554 1 + 186847797 a
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   2207 1 +      8208 A
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     79325 1 +    610378 A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          6282 1 -     20410 A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    10478 1 +     15221 A
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        6383 1 +     19930 A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2813 1 -     19997 A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42932 1 -     60166 A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        10405 1 -     27529 A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     10345 1 -     18194 A
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           4080 1 -     21137 A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2783 1 -     10723 A
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1935 1 +      9834 A
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        20253 1 +     32220 A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5934350 1 +   6242583 A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        3597 1 +     20839 A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                   1162 1 -      1748 A
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 C 0
s Tupaia_chinensis.KB320699.1                              2150777 1 +   4065304 a
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     4075 1 -     10553 A
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15738102 1 +  33153633 A
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Ursus_maritimus.KK499267.1                               4847291 1 -   5085361 A
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   7416 1 +     50397 G
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              7464 1 +     24756 G
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368759 1 -   5488506 A
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7748 1 -     43706 A
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_63728          2213 1 +      2932 a
i Zalophus_californianus.ZalCal_flattened_line_63728     C 0 N 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11794 1 +     12536 A
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906 0 -     10935 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      10862 0 +     63895 C
e Xerus_inauris.XerIna_scaffold_48378                        20093 2 -     24430 I
e Uropsilus_gracilis.UroGra_scaffold_97021                    2273 0 -      4736 I
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103809 0 +    114563 C
e Spermophilus_dauricus.KZ294078.1                         1948591 2 -   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Procavia_capensis.ProCapCap_scaffold_85530                 10240 0 -     22811 C
e Petromus_typicus.PetTyp_scaffold_42190                     26674 0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25636 0 +     32600 C
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.KL204047.1                            2025964 0 -   3037898 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              2698 2 +     14296 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Marmota_marmota.CZRN01000018.1                          33097803 2 -  40650429 I
e Macroglossus_sobrinus.MacSob_scaffold_8222                 87886 0 +     94391 C
e Loxodonta_africana.GL010049.1                            4214777 0 -  43346337 C
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Jaculus_jaculus.JH725527.1                               8271719 23 -   9596543 I
e Ictidomys_tridecemlineatus.JH393364.1                    7514953 2 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      81495 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20399 0 -    143317 C
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491 0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20659911 0 +  22651954 C
e Graphiurus_murinus.GraMur_scaffold_10447                   30429 2 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            30705 2 +     49224 I
e Galagoides_demidoff.k141_31856                              3217 0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089268 0 +  10337057 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32023 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12379 1 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896161 1 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    34836 0 +     67921 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1775 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3422 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Crocidura_indochinensis.CroInd_scaffold_287352               881 37 +      4208 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Chinchilla_lanigera.JH722012.1                           1251351 0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99147 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360273 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348013 0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    133999 2 +    179628 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Aplodontia_rufa.AprRuf_scaffold_68852                       7633 9 +     20879 I
e Allactaga_bullata.AllBul_scaffold_9566                     65331 27 -     89534 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       1998 50 +     62944 TTT--ACATTATTTTGATT-CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
s Acinonyx_jubatus.LLWD01001279.1                           823929 54 -   1699592 TTT--AAACGATTTTAAT-NCCT-------------------GTTAAT---ATAT-------ctcatcag--------------gtttttt--tt---tcttag----a
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507377 50 -  29979442 ttt--aaattattttaat-Nctt-------------------GATAAT---ATAC-------GTCATCAA------------------TTT--TG---CTTTAG----A
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             75954 48 -    347723 ttt--aaattatttttat-Nctt-------------------gaTAAT-----AT-------GTCATCAG------------------TTT--TG---CTTTAG----A
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     65358 13 -     89534 ----------------------------------------------------------------------------------------TTT--TATTGCATTA------
i Allactaga_bullata.AllBul_scaffold_9566                 I 27 C 0
s Allenopithecus_nigroviridis.k141_3361533                    9978 49 -     52922 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9909 49 -     28001 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                           355 49 -     18505 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           1204 49 -     12518 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675733 50 -   2318259 TTT--CAACTATTTTAAT-NCCT-------------------CGTAAT---ACAA-------ATTATCAG------------------TTC--TC---TTTTAG----A
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183464 57 +    412891 TTT--AAATTACTTTAAT-NTGT-------------------GGTACT---ATAAATAATAAATTATCAG------------------TTC--TG---CTTTAG----A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             98215 50 -    100397 TTT--CAATTATTTGAGT-NCCT-------------------TGTAAT---ACAA-------ATTATCAG------------------TTC--TC---TTTTAG----A
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7642 25 +     20879 ----------------------------------------------AT---ATAG-------ATCACCAG------------------TTC--TA---CT-TAG----A
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 9 C 0
s Arctocebus_calabarensis.k141_288239                        14794 47 +     17124 CTT--AAATTACTTTAAT-NCCT-------------------AGTAAT---ACAA-------ATAA---G------------------TTC--CA---CATTAG----A
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2821 57 +     43469 TTT--AAATTACTTTAAT-NTGT-------------------GGTTCT---ATAAATAATAAATTATCAG------------------TTC--TG---CTTTAG----A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  49671 50 -     92717 CTT--AAATTATTTTAAT-NCCG-------------------AGTAAT---TTAA-------ATCATCCA------------------TTC--TT---CTTTAA----A
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              50296 50 +     85213 CTT--AAATTATTTTAAT-NCCG-------------------AGTAAT---TTAA-------ATCATCCA------------------TTC--TT---CTTTAA----A
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15191960 50 +  23207421 TTT--CCATGATTTTAAT-NCCT-------------------TGTAAT---ATAA-------ATGATCAG------------------TTC--TC---TTTTAG----A
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2425 50 -     18090 TTT--CCATGATTTTAAT-NCCT-------------------TGTAAT---ATAA-------ATGATCAG------------------TTC--TC---TTTTAG----A
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26655 50 +     34529 TTT--CAATTATTTTAAT-NCCT-------------------CGTAAT---ACAA-------ATTATCAG------------------TTC--TC---TTTTAG----A
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    199712 50 -    288883 ttt--caattattttaat-NcCT-------------------CGTAAT---ACAA-------ATTATCAG------------------TTC--TC---TTTTAG----A
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20272917 50 +  48749331 ttt--caattattttaat-NcCT-------------------CGTAAT---ACAA-------ATTATCAG------------------TTC--TC---TTTTAG----A
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1125473 50 -   1948126 ttt--caattattttaat-NcCT-------------------CGTAAT---ACAA-------ATTATCAG------------------TTC--TC---TTTTAG----A
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18083555 50 +  45695690 ttt--caattattttaat-NcCT-------------------CGTAAT---ACAA-------ATTATCAG------------------TTC--TC---TTTTAG----A
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2819222 50 +   4408762 ttt--caattattttaat-NcCT-------------------CGTAAT---ACAA-------ATTATCAG------------------TTC--TC---TTTTAG----A
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9999269 50 -  17673402 TTT--CAATTGTTTTCAT-NTCT-------------------TGTAAT---ACAA-------ATTATCAT------------------CTC--CC---CTTTAG----A
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331733 50 -   7040546 TTT--CAATTGTTTTCAT-NTCT-------------------TGTAAT---ACAA-------ATTATCAT------------------CTC--CC---CTTTAG----A
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  400009 50 -   1652518 TTT--CAATTGTTTTCAT-NTCT-------------------TGTAAT---ACAA-------ATTATCAT------------------CTC--CC---CTTTAG----A
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17796126 53 -  60362399 TTT--AAATTATTTTAAT-NCTT-------------------TATAAT---ATAG-------GTCATCAT---------------AACTGA--TG---ACCTAG----A
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182183 53 -    185531 TTT--AAATTATTTTAAT-NCTT-------------------TATAAT---ATAG-------GTCATCAT---------------AACTGA--TG---ACCTAG----A
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031569 53 -   9314153 ttt--aaattattttaat-Nctt-------------------tataAT---ATAG-------GTCATCAT---------------AACTGA--TG---ACCTAG----A
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17955834 53 -  59632846 ttt--aaattattttaat-Nctt-------------------tataAT---ATAG-------GTCATCAT---------------AACTGA--TG---ACCTAG----A
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18497134 53 +  63665305 ttt--aaattattttaat-Nctt-------------------tataAT---ATAG-------GTCATCAT---------------AACTGA--TG---ACCTAG----A
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18829851 50 +  46296322 TTT--CAACTATTTTAAT-NCCT-------------------CATAAT---ACAA-------ATTATCAG------------------TTC--TC---TTTTAG----A
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18060571 50 -  44709034 TTT--CAACTATTTTAAT-NCCT-------------------CATAAT---ACAA-------ATTATCAG------------------TTC--TC---TTTTAG----A
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           141415 50 -    496798 ttt--aattttttttaat-Ncct-------------------ggTATT---ATAA-------ATCATCAG------------------TTC--TG---CTTTAG----A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                3238 57 -     11696 TTT--CAGTTACTTTAAT-NTGT-------------------GGTACT---ATAAATCATAAGTTATCAG------------------TTC--TG---CTTTAG----A
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    134001 50 +    179628 TTT--AAACTGTTTTAAC-NGCT-------------------GGTAAT---ATAA-------ATCATCAG------------------CTC--TA---CTTTAg----a
i Castor_canadensis.CasCan_scaffold_2074                 I 2 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89614 50 +    217609 TCT--CAATTATTTTAAT-NCCT-------------------TGTAAT---ATAA-------ATTATCCC------------------TTC--TC---CTTTAG----A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18348013 50 -  23392119 C--TTAAATTATATCAAT-NTCT-------------------AGTAAT---ACAA-------ATCATTAG------------------TTC--TA---CTTTAA----A
i Cavia_aperea.AVPZ01000300.1                            C 0 I 5
s Cavia_porcellus.DS562891.1                              18360273 50 -  23407841 C--TTAAATTATATCAAT-NTCT-------------------AGTAAT---ACAA-------ATCATTAG------------------TTC--TA---CTTTAA----A
i Cavia_porcellus.DS562891.1                             C 0 I 5
s Cavia_tschudii.CavTsc_scaffold_8919                        99147 50 +    143979 C--TTAAATTATATCAAT-NTCT-------------------AGTAAT---ACAA-------ATCATTAG------------------TTC--TA---CTTTAA----A
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 I 5
s Cephalopachus_bancanus.k141_2037105                         5330 50 -      8605 TTT--ATTTTTTTTTAAT-NCCT-------------------GGTATT---ATAA-------ATCATCAG------------------TTC--TG---CTTTAG----A
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12228251 45 +  27778364 tt-------tattttaat-NccT-------------------GGTAAT---ATAA-------ATCCTCGG------------------TTC--TG---CTTTAG----A
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          2969 45 -      3715 TT-------TATTTTAAT-NCCT-------------------GGTAAT---ATAA-------ATCCTCGG------------------TTC--TG---CTTTAG----A
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4470938 49 +   4669795 ttt--acattattttagt--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         9487 49 -     19203 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3908 49 +      8260 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           4136 49 +     27781 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         4294 49 -     20310 TTT--ACGTTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           7278 49 +     29689 TTT--ACGTTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            1716 49 +      9989 TTT--ACGTTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                           9962 49 -     27936 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                             9988 49 -     11289 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38812360 49 +  39242232 TTT--ACGTTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21218059 49 -  21565898 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       35178 49 -     53127 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        2463 49 +      7159 TTT--ACGTTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                        9981 49 -     27947 TTT--ACGTTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                          9957 49 +     17596 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         40457 49 -     41420 TTT--ACGTTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            5148 48 -      6351 TTG--AAATAACT-TAAG-NCCC-------------------AGTAAC---ATAA-------A-CACCAG------------------TTC--TG---CTTTAA----A
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             17087 50 -     52598 TTT--AAATTATTTTAAT-NCCT-------------------AGTAAT---ATAA-------ATCGCCCA------------------TTC--TG---CTTTAG----A
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12437 50 +     57038 TTT--AAATTATTTTAAT-NCCT-------------------AGTGAT---ATAA-------ATCACCCA------------------TTC--TG---CTTTAG----A
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1251351 54 +   2543920 C--TTAAATTATATCAGC-NCTT-------------------CGTA-T---ACAA-------ATCATTAG------------------CTC--TA--CTTTAAAGATTA
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18423920 49 -  18827391 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       10361 49 -     50209 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135417369 49 + 135778131 ttt--acattattttagt--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15526 50 +     19366 TTT--AAATAATTTTAAT-NCCC-------------------AGTAAT---ATAA-------ATCATCAG------------------CTC--TG---CTTCAG----A
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170625 50 +    839153 ttt--aaataattttaat-NccC-------------------AGTAAT---ATAA-------ATCATCAG------------------CTC--TG---CTTCAG----A
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1905906 19 +   2368649 ---------------------------------------------------------------ttattag------------------ttc--TG---CTTTAG----A
i Colobus_angolensis.KN981557.1                          I 11 C 0
s Colobus_guereza.LG01                                   199945576 18 + 200372422 ---------------------------------------------------------------TTAATC-------------------TTC--TG---CTTTAG----A
i Colobus_guereza.LG01                                   I 11 C 0
s Colobus_polykomos.k141_906115                              32447 19 +     84244 ---------------------------------------------------------------TTATTAG------------------TTC--TG---CTTTAG----A
i Colobus_polykomos.k141_906115                          I 11 C 0
s Condylura_cristata.JH655891.1                           17546666 49 -  53390261 ttc--atataatttaaat-NattctaataaatTATATTGTACACTAAT---ATAA------------------------------------------------------
i Condylura_cristata.JH655891.1                          C 0 I 21
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10878 30 -     20389 TTT--AAATAATTGTAAT-NCCT-------------------GGTAAT---ATAA------------------------------------------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 20
s Crocidura_indochinensis.CroInd_scaffold_239572              1731 23 -      5012 ------AATTACCTTAGT-NCCT-------------------GGTAAC---A---------------------------------------------------------
i Crocidura_indochinensis.CroInd_scaffold_239572         n 37 I 66
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24825 50 -     87169 TTT--AAATGATTTTAAT-NCTC-------------------GATAAT---GTAT-------CTCATCAG------------------TTT--TG---CTTTAG----A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 3422 50 +      5455 C--TTAAATTATATCAAT-NCCT-------------------AGTAGT---ACAA-------ATCATTAT------------------TTC--TA---CTTTAA----A
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 I 5
s Dasyprocta_punctata.DasPun_flattened_line_206793            1775 50 +      3576 C--TTAAATTATATCAAT-NCCT-------------------AGTAAT---GCAA-------ATCATTAG------------------TTC--TA---CTTTAA----G
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 I 5
s Dasypus_novemcinctus.JH564415.1                            61417 50 +   2246927 ttg--aaataattttaat-NcCC-------------------AGCCAC---ATAA-------GTCATCAG------------------TTC--TG---CTGTAA----A
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12533258 50 -  12879189 TTT--AAATTATTTTAAT-NCCT-------------------GGTCGT---ATAA-------ATCATCAG------------------ATC--TG---CTTTAG----A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811595 50 +  35494412 TTT--CCATGATTTTAAT-NCCT-------------------TGTAAT---ATAA-------ATGATCAG------------------TTC--TC---TTTTAG----A
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8628270 57 +  20541912 ttt--aaattattttaat-Ntgt-------------------gGTACT---ATAAATCATAAGTTATCAG------------------TTC--TG---CTTTAG----A
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  670099 50 +   1390856 ttt--aaattattttaat-NccT-------------------GGTAAT---ATAA-------ATCATCGG------------------TTC--TG---CTTTAG----A
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2859 45 +    198055 TT-------TATTTTAAT-NCCT-------------------GGTAAT---ATAA-------ATCCTCGG------------------TTC--TG---CTTTAG----A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34836 54 +     67921 C--TTAAATTATGCCAAT-NCCT-------------------AGTAAC---ACAA-------ACCACTAG------------------CTC--TA---TGTAAAGATTA
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18896162 49 +  37912305 CAT--AAATTATTTGACT-NTTA-------------------GGTGAT---GTAG-------ATA-ACAA------------------TTC--TA---CTTTAG----A
i Dipodomys_ordii.KN672350.1                             I 1 C 0
s Dipodomys_stephensi.DipSte_scaffold_75855                  12380 49 +     14536 CAT--AAATTATTTGACT-NTTA-------------------GGTGAT---GTAG-------ATA-ACAA------------------TTC--TA---CTTTAG----A
i Dipodomys_stephensi.DipSte_scaffold_75855              I 1 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 32023 50 -     42551 C--TTATATTATATCAAT-NCCT-------------------ACTAAT---ACAA-------ATCATTAG------------------TTC--TG---CTTTAA----A
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 I 5
s Eidolon_helvum.KE759718.1                                   7783 50 +     11740 ttt--aaattattttaat-Ntct-------------------ggTAAT---ATAA-------GTCATCAG------------------TTC--TG---CGTTAG----A
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310886 50 +    607251 ttt--caattattttaat-NcCT-------------------TGTAAT---ACAA-------ATGATCAG------------------TTC--TC---TTTTAG----A
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Enhydra_lutris.KZ291758.1                               16326141 48 -  41312741 ttt--aaattatttttat-Nctt-------------------gaTAAT-----TT-------GTCATCAG------------------CTT--TG---TTTTAG----A
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144424 23 -  14770903 ttt--aaattattttcat-Ntgt-------------------Ggt----------------------------------------------------------------
i Eptesicus_fuscus.JH977646.1                            C 0 I 1
s Equus_asinus.JREZ01000139.1                              1280138 50 +   4378816 ttt--acattcttttaat-NCCT-------------------GGTAAT---AGAA-------ATCATCAG------------------TTC--TG---CGTTAG----A
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18527959 50 -  39960074 ttt--acattattttaat-NcCT-------------------GGTAAT---AGAA-------ATCATCAG------------------TTC--TG---CTTTAG----A
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               29974 50 +    498745 ttt--acattattttaat-NcCT-------------------GGTAAT---AGAA-------ATCATCAG------------------TTC--TG---CTTTAG----A
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3326498 23 -   7059049 --------------------------------------------TAAT---ATGc-------atgaccag------------------ttt--tt---tt---------
i Erinaceus_europaeus.JH835339.1                         I 652 C 0
s Erythrocebus_patas.Contig38                             21200551 49 -  21539334 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11271 50 +    133382 TTT--CCATGATTTTAAT-NCCT-------------------TGTAAT---ATAA-------ATGATCAT------------------TTC--TC---TTTTAG----A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             25208 50 -     44125 TTT--CCATGATTTTAAT-NCCT-------------------TGTAAT---ATAA-------ATGATCAG------------------TTC--TC---TTTTAG----A
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Eulemur_albifrons.k141_342033                               9768 50 -     14127 TTT--AAATTATTTTAGT-NCCT-------------------AGTAAT---ATAA-------AGCATCCA------------------TTC--TG---CTTTAG----A
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                2466 50 -     16928 TTT--AAATTATTTTAGT-NCCT-------------------AGTAAT---ATAA-------AGCATCCA------------------TTC--TG---CTTTAG----A
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              11499 50 -     25546 TTT--AAATTATTTTAGT-NCCT-------------------AGTAAT---ATAA-------ATTATCCA------------------TTC--CG---CTTTAG----A
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             8684 50 +     26330 TTT--AAATTATTTTAGT-NCCT-------------------AGTAAT---ATAA-------ATCATCCA------------------TTC--CG---CTTTAG----A
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                  9941 50 +     23973 TTT--AAATTATTTTAGT-NCCT-------------------AGTAAT---ATAA-------ATCATCCA------------------TTC--TG---CTTTAG----A
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 8684 50 +     75513 TTT--AAATTATTTTAGT-NCCT-------------------AGTAAT---ATAA-------ATCATCCA------------------TTC--CG---CTTTAG----A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  6636 50 +     97555 TTT--AAATTATTTTAGT-NCCT-------------------AGTAAT---ATAA-------ATCATCCA------------------TTC--TG---CTTTAG----A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                             9562 50 +     26496 TTT--AAATTATTTTAGT-NCCT-------------------AGTAAT---ATAA-------ATCATCCA------------------TTC--TG---CTTTAG----A
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                   168 50 -     17153 TTT--AAATTATTTTAGT-NCCT-------------------AGTAAT---ATAA-------AGCATCCA------------------TTC--TG---CTTTAG----A
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                               9747 50 +    111500 TTT--AAATTATTTTAGT-NCCT-------------------AGTAAT---ATAA-------ATCATCCA------------------TTC--TG---CTTTAG----A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20233783 60 + 206538554 ttt--aaatgattttaat-NcCT-------------------GTTAAT---ATAT-------CTCatcag-------gtttttggttt-tt--tt---ttttag----a
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20192631 59 + 205367284 ttt--aaatgattttaat-NcCT-------------------GTTAAT---ATAT-------CTCAtcag--------gtttttgggg-tt--tt---ttttag----a
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  6142 61 -     36744 TTT--AAATTATTTTAAT-NCCT-------------------GTTAAT---ATAT-------CTCATCAGGTTTTT---G----GTTTTTT--TT---TTTTAG----A
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_56069               25823 50 +     26054 TTT--AAATTATTTTCAT-NCCT-------------------GGTAAC---ATAA-------ATCATCAG------------------TTC--TG---CTTTAG----A
i Galeopterus_variegatus.GalVar_scaffold_56069           C 0 N 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     608851 50 -    660261 ttt--caattattttaat-NcCT-------------------TGTAAT---ACAA-------ATTATCAG------------------Ttc--tc---ttttag----a
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30707 50 +     49224 TTT--AAATTATTTTAAT-NCCT-------------------GGTAAT---ATAA-------ATCATCAG------------------TTT--TA---CTTTAG----A
i Glis_glis.GliGli_scaffold_19807                        I 2 C 0
s Gorilla_beringei.k141_2022027                               2653 50 +      3305 TTT--ACATTATTTTGATC-CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Gorilla_beringei.k141_2022027                          I 37 I 105
s Gorilla_gorilla.CYUI03002401.1                              6943 50 +      7071 ttt--acattattttgatC-CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Gorilla_gorilla.CYUI03002401.1                         I 687 n 50
s Graphiurus_murinus.GraMur_scaffold_10447                   30431 48 +     78134 TTT--AAAGTATTTTAAT-NCCT-------------------GGTAAT-----AA-------ATCATCAG------------------TTT--TA---CTCTAG----A
i Graphiurus_murinus.GraMur_scaffold_10447               I 2 C 0
s Hapalemur_alaotrensis.k141_170648                           2832 50 -     19426 TTT--AAATGATTTTAGT-NCCT-------------------AGTAAT---ATAA-------ATAATCCA------------------TTC--TG---CTTTAG----A
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              7976 50 -     15286 TTT--AAATGATTTTAGT-NCCT-------------------AGTAAT---ATAA-------ATAATCCA------------------TTC--TG---CTTTAG----A
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                              9614 50 +     18253 TTT--AAATGATTTTAGT-NCCT-------------------AGTAAT---ATAA-------ATAATCCA------------------TTC--TG---CTTTAG----A
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                          9717 50 -     41752 TTT--AAATGATTTTAGT-NCCT-------------------AGTAAT---ATAA-------ATAATCCA------------------TTC--TG---CTTTAG----A
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                          9550 50 -     16460 TTT--AAATGATTTTAGT-NCCT-------------------AGTAAT---ATAA-------ATAATCCA------------------TTC--TG---CTTTAG----A
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238749 50 +    327341 TTT--AAATGATTTTAAT-NCTT-------------------GATAAT---TTAT-------CTCATCAG------------------TTT--CA---CTTTAG----A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18055 50 +     36099 TTT--CAATTATTTTAAT-NCCT-------------------CGTAAT---ACAA-------ATTATCAG------------------TTC--TC---TTTTAG----A
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20659911 50 +  22651954 C--TTGAATTATATCAAT-NCCT-------------------TGTAAT---ACAG-------ATCATCAG------------------TTC--TA---CTTTAA----A
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112408 50 +    128679 TTT--CAATTATTTTAAT-NCAT-------------------TGTAAT---ATAA-------ATGGTCAG------------------TTC--TC---TTATAG----A
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108652 50 +   1711038 ttt--aaattattttaat-NccT-------------------GACAAT---ATAA-------AACATCAG------------------TTC--TG---CTTTAG----A
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               40093 50 +     43066 TTT--AAATTATTTTAAT-NCCT-------------------GATAAT---ATAC-------AACATCAG------------------TTC--TG---CTTTAG----A
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    430128 49 +    630532 TTT--ACATTATTT-AATC-CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  41280 50 +     55795 ATT--AAATGATTTTAAT-NGTT-------------------GATAAT---ATAT-------CTCATCAG------------------TTT--TG---CTTTAG----A
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 4 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20399 50 -    143317 C--TTAAATTATATCAAT-NCCT-------------------AGTAAT---ACAA-------ATCATTAG------------------TTC--TA---CTTTAA----A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 5
s Hylobates_agilis.k141_307679                               13059 50 -     15490 TTT--ACATTATTTTAATC-CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              55064 50 +     67168 TTT--ACATTATTTTAATC-CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189538714 50 - 191637585 TTT--ACATTATTTTAATC-CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3331607 50 -  11177569 TTT--ACATTATTTTAATC-CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      81495 40 +    135385 CTT--AATTTATTTCAAT-NCCT-------------------AGTAAT---ATAA-------ATCATCAG------------------TT-------------------
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 5
s Ictidomys_tridecemlineatus.JH393364.1                    7514955 50 -   7955117 ttt--gaattattttaat-NcCT-------------------GGCAAT---ATAA-------ATCACCAG------------------TTC--TA---ctttat----a
i Ictidomys_tridecemlineatus.JH393364.1                  I 2 C 0
s Indri_indri.k141_3655594                                   18533 50 +     31101 TTT--AAATTATTTTAAT-NCCT-------------------AGTAAT---ATAA-------ATCATCCA------------------TTC--TG---CTTTAG----A
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22812 50 +     23964 TTT--CCATGATTTTAAT-NCCT-------------------TGTAAT---ATAA-------ATGATCAG------------------TTC--TC---TTTTAG----A
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8271742 13 -   9596543 ----------------------------------------------------------------------------------------ttt--tattgcatta------
i Jaculus_jaculus.JH725527.1                             I 23 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                2174 50 -      3359 TTT--CCATGATTTTAAT-NCCT-------------------TGTAAT---ATAA-------ATGATCAG------------------TTC--TC---TTTTAG----A
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    12849 23 -     42476 TTT--AAATTATTTTCAT-NTGT-------------------Ggt----------------------------------------------------------------
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 41
s Lemur_catta.scaffold_24                                 15520076 50 -  30322482 TTT--AAATGATTTTAGT-NCCT-------------------AGTAAC---ATAA-------ATTATCCA------------------TTC--TG---CTTTAG----A
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          6988 50 -     23766 TTT--AAAGTATTTTAAT-NCCT-------------------AGTAAT---ATAA-------ATCATCCA------------------TTC--TG---CCTTAG----A
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24935 50 +     45836 TTT--AAAGTATTTTAAT-NCCT-------------------AGTAAT---ATAA-------ATCATCCA------------------TTC--TG---CCTTAG----A
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_582783                           810 50 -      1589 TTT--AAATTATTTTAAT-NCCT-------------------AGTAAT---ATAA-------ATCATCCA------------------TTC--TG---CCTTAG----A
i Lepilemur_ruficaudatus.k141_582783                     I 56 I 7
s Lepilemur_septentrionalis.k141_185316                      22990 50 +     54090 TTT--AAAGTATTTTAAT-NCCT-------------------AGTAAT---ATAA-------ATCATCCA------------------TTC--TG---CCTTAG----A
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3039288 50 +   3914936 ttt--aaattattttaat-Nctt-------------------gATAAT---ATAT-------GTCATCAG------------------TTT--TC---CTTTAG----A
i Leptonychotes_weddellii.KB714746.1                     I 2813 C 0
s Lipotes_vexillifer.KE559953.1                             267864 50 -    662738 TTT--CCATGATTTTAAT-NCCT-------------------TGTAAT---ATAA-------ATGATCAG------------------TTC--TC---TTTTAG----A
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1432482 49 +   1826925 TTT--ACATTATTTTAGT--CTT-------------------GGTCAT---ATAA-------ATTATTAA------------------TTC--TG---CTTTAG----A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            1055 46 +     11245 CTT--AAATTATTTTAAT-NCCT-------------------AGTAAT---ATA--------ATAA---G------------------TTC--CA---CTTTAG----A
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999892 46 +   6120653 CTT--AAATTATTTTAAT-NCCT-------------------AGTAAT---ATA--------ATAA---G------------------TTC--CA---CTTTAG----A
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17952074 53 -  59628241 ttt--aaattattttaat-Nctt-------------------tataaT---ATAG-------GTCATCAT---------------AACTGA--TG---ACCTAG----A
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               2303 49 +     40492 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59671558 49 +  60120075 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  8058 49 -     26193 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75855 49 -    114318 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  1570 49 -     23192 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                11023 49 -     29190 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  19590 49 +     37952 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834678 49 + 187317192 ttt--acattattttagt--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25453241 49 -  25927173 ttt--acattattttagt--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  75439 49 +     89720 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 2437 49 +     20474 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   2238 49 -     14993 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  325110 49 -    668171 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TA---CTTTAG----A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                  541 49 -     24072 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               21177 49 -     45290 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87886 44 +     94391 --------TTATTTTAAT-NTCT-------------------GGCAAT---ATAA-------ATCATTAG------------------TTC--TG---CTTCAG----A
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23932726 49 -  24302211 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346903 49 +    752769 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              15961 50 +    737560 ttt--acattattttaac-NCCT-------------------GGTAAT---ATAA-------ATCATCAG------------------TCC--TG---CTTTGG----G
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              47350 50 -    317179 ttt--acattattttaac-NCCT-------------------GGTAAA---ATAA-------ATCATCAG------------------TTC--TG---CTTTGG----G
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097805 50 -  40650429 ttt--gaattattttaat-NcCT-------------------GGTAAT---ATAA-------ATCACCAG------------------TTC--ta---ctttat----a
i Marmota_marmota.CZRN01000018.1                         I 2 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         7159 50 -    207569 TTT--AAATTATTGTAAT-NCCT-------------------TGTAAT---ATAA-------AACATCAG------------------TTC--TG---CTTTGG----A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6854 48 +     13704 TTT--AAATTATTTTTAT-NCTT-------------------GATAAT-----TT-------GTCATCAG------------------TTT--TG---TTTTAG----A
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3480 50 +     10310 TTT--CCATGATTTTAAT-NCCT-------------------TGTAAT---ATAA-------ATGATCAG------------------TTC--TC---TTTTAG----A
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18287472 50 -  93316391 ttt--aaattattttaat-NccT-------------------AGTAAT---ATAA-------ATCATCCA------------------TTC--TG---CTTTAG----A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13781 57 -     19307 TTT--AAATTATTTTAAT-NTGT-------------------GGTACT---ATAAATCATAAATTATCAG------------------TTC--TG---CTTTAG----A
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849672 14 +   8254450 TTT--AAATTATTGTA---------------------------------------------------------------------------------------------
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             33349 14 +     64694 TTT--AAATTATTGTA---------------------------------------------------------------------------------------------
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           4476 49 -     28506 TTT--ACGTTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         2124 50 -      8324 TTT--AAATTATTTTAAT-NCTT-------------------GATAAT---ATAT-------GTCATCAG------------------TTT--TC---CTTTAG----A
i Mirounga_angustirostris.MirAng_flattened_line_93702    N 0 C 0
s Mirza_zaza.k141_952172                                      5040 50 -     37649 TTT--AAATTATTTTAAT-NCCT-------------------AGTAAT---ATAA-------ATCATCCA------------------TTC--TG---CTTTAG----A
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    26985 50 -    437263 TTT--CCATGATTTTAAT-NCCT-------------------TGTAAT---ATAA-------ATGATCAG------------------TTC--TC---TTTTAG----A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138184 57 -    366855 TTT--AAATTATTTTAAT-NTGT-------------------GGTAAC---ATAAATCATATATCACCAG------------------TTC--TG---CTTTAG----A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                    937 50 +     82753 TTT--CAATTATTTTAAT-NCCT-------------------CATAAC---ACAA-------ATTATCAG------------------TTC--TC---TTTTAG----A
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   31980 50 +     37127 TTT--AAATGATTTTAAT-NCTT-------------------GATAAT---TTAT-------CTCATCAG------------------TTT--CA---CTTTAG----A
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5497 23 +     14753 TTT--AAATCATTTTCAT-NTGT-------------------Agt----------------------------------------------------------------
i Murina_feae.MurFea_scaffold_85699                      C 0 I 1
s Muscardinus_avellanarius.MusAve_scaffold_82313              2700 50 +     14296 TTT--AAATTATTTTAAT-NCCT-------------------GGTAAT---ATAA-------ATAATCAG------------------TTT--TA---CTTTAG----A
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 2 C 0
s Mustela_putorius.JH418006.1                               298039 48 -  14710649 ttt--aaattatttttat-Nctt-------------------gaTAAC-----TT-------GTCATCAG------------------CTT--TG---TTTCAG----A
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                278669 23 -  10118263 ttt--aaattattttcat-Ntgt-------------------ggt----------------------------------------------------------------
i Myotis_brandtii.KE162005.1                             C 0 I 1
s Myotis_davidii.KB100139.1                                1586367 23 -   6019432 aaa--aaattattttcat-Ntgt-------------------ggt----------------------------------------------------------------
i Myotis_davidii.KB100139.1                              C 0 I 1
s Myotis_lucifugus.GL429869.1                              3902433 23 -   4330536 ttt--aaattattttcat-Ntgt-------------------ggt----------------------------------------------------------------
i Myotis_lucifugus.GL429869.1                            C 0 I 1
s Myotis_myotis.MyoMyo_scaffold_28916                        32993 23 +     33610 TTT--AAATTATTTTCAT-NTGT-------------------Ggt----------------------------------------------------------------
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 I 1
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186477 50 +    196477 TTT--AAATAATTTTAAT-NCCC-------------------AATTAT---ATAA-------ATCGTCAG------------------TTC--TG---CTTTAG----A
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2025964 50 -   3037898 ttt--tttttactttaat-NcCT-------------------AATAAT---ATAA-------ATCTTCAA------------------TTC--TA---CTTGAG----A
i Nannospalax_galili.KL204047.1                          C 0 I 36
s Nasalis_larvatus.k141_413338                               10476 49 +     21681 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865941 50 +   7148211 TTT--CCATGATTTTAAT-NCCT-------------------TGTAAT---ATAA-------ATGATCAG------------------TTC--TC---TTTTAG----A
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756744 50 +    783361 TTT--CAATTACTTTAAT-NTGT-------------------GGTAAA---AGAA-------ATCATCAG------------------TTT--TG---CTGTTG----A
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146335 53 -   9404916 ttt--aaattattttaat-Nctt-------------------GATAAT---ATAG-------GTCATCAT---------------AACTGA--TG---ACCTAG----A
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102574855 47 - 196305487 CTT--AAATTATTTTAAT-NCCT-------------------AGTAAT---ATAA-------ATAA---G------------------TTC--CA---CTTTAG----A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2541 47 +      8486 CTT--AAATTATTTTAAT-NCCT-------------------AGTAAT---ATAA-------ATAA---G------------------TTC--CA---CTTTAG----A
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105745282 47 + 199412804 CTT--AAATTATTTTAAT-NCCT-------------------AGTAAT---ATAA-------ATAA---G------------------TTC--CA---CTTTAG----A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1358997 50 +   3988456 TTT--GAGTGATTTTAAC-NCCT-------------------AGTAAT---ATAA-------ATCATCAG------------------TTC--TG---CTTCAG----T
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              503430 50 -   2017862 ttt--aaattattttaat-Nctt-------------------GATAAT---ATAT-------GTCATCAG------------------TAT--TG---CCTTAG----A
i Odobenus_rosmarus.KB229312.1                           I 2338 C 0
s Odocoileus_virginianus.KZ100018.1                         145257 50 +    630418 ttt--caattattttaat-NcCT-------------------TGTAAT---ACAA-------ATTATCAG------------------TTC--TC---TTTTAG----A
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          76768 50 -    150152 ttt--caattattttaat-NcCT-------------------TGTAAT---ACAA-------ATCATCAG------------------TTC--TC---TTTTAG----A
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  2781856 50 -  10937097 TTT--CCATGATTTTAAT-NCCT-------------------TGTAAT---ATAA-------ATGATCAG------------------TTC--TC---TTTTAG----A
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       459088 53 -    559221 ttt--aaattattttaat-Nctt-------------------tataaT---ATAG-------GTCATCAT---------------AACTGA--TG---ACCTAG----A
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17586030 50 +  44047080 ttt--caattattttaat-NcCT-------------------CGTAAT---ACAA-------ATTATCAG------------------TTC--TC---TTTTAG----A
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      174007 50 -    191736 TTT--CAATTATTTTAAT-NCCT-------------------CGTAAT---ACAA-------ATTATCAG------------------TTC--TC---TTTTAG----A
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    39350 50 +     80009 ttt--acattattttgatC-CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03001836.1                             25267 50 +     51860 ttt--acattattttgatC-CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Pan_troglodytes.NBAG03001836.1                         C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  147787 70 +    230217 TTT--AAATGATTTTAAT-NCTT-------------------GTTAAT---ATAG-------CTCATCAGGTTTTTTTTGTTTTGTTTTTTTTTT---TTTTAG----A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                260995 69 +  18783137 ttt--aaatgattttaat-NcTT-------------------GTTAAT---ATAG-------Ctcatcaggttttttttgttttgtttttt-ttt---ttttag----a
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4717633 68 -   8748460 ttt--aaatgattttaat-NcTT-------------------GTTAAT---ATAG-------CTCatcaggtttgttttgttttgttttgt--tt---ttttag----a
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1264945 29 -   2937107 -------------------------------------------GTAAG---ACAA-------ATTATCAG------------------TTC--TC---TTTTAG----A
i Pantholops_hodgsonii.KE114653.1                        I 5 C 0
s Papio_anubis.CM001495.2                                183438511 49 + 183742232 ttt--acattattttagt--CTT-------------------GGtcat---ataa-------attattaa------------------ttc--tG---CTCTAG----A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             2204 49 +     20448 TTT--ACATTATTTTAGT--CTT-------------------GGTCAT---ATAA-------ATTATTAA------------------TTC--TG---CTTTAG----A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20559009 49 +  20919399 TTT--ACATTATTTTAGT--CTT-------------------GGTCAT---ATAA-------ATTATTAA------------------TTC--TG---CTTTAG----A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                    947 49 +     41871 TTT--ACATTACTTTAGT--CTT-------------------GGTCAT---ATAA-------ATTATTAA------------------TTC--TG---CTTTAG----A
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     4233 49 +     27711 TTT--ACATTATTTTAGT--CTT-------------------GGTCAT---ATAA-------ATTATTAA------------------TTC--TG---CTTTAG----A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  4318 49 +      9205 TTT--ACATTATTTTAGT--CTT-------------------GGTCAT---ATAA-------ATTATTTA------------------TTC--TG---CTTTAG----A
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9466 50 -     78924 TTT--AAATTAATTTAAT-NCTT-------------------GATAAT---ATAT-------CTCATCAG------------------TTT--TG---CTGTAG----A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            5030 47 +     13100 CTT--AAATTATTTTAAT-NCCT-------------------AGTAAT---ATAA-------ATAA---G------------------TTC--CA---CATTAG----A
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             3403 47 +     25941 CTT--AAATTATTTTAAT-NCCT-------------------AGTAAT---ATAA-------ATAA---G------------------TTC--CA---CATTAG----A
i Perodicticus_potto.k141_1092580                        I 5 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25636 49 +     32600 -AT--AAATTATTTTAAT-NCTT-------------------GGTGAT---GTAA-------ATCATCAA------------------TTC--TA---CTTTAG----A
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     26674 48 -     29689 C----AAATCATATCAAT-NCCT-------------------ACTAAT---ACAA-------GTCATCAC------------------TCC--TA---CTTTAA----A
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8903 50 +     63832 TTT--CCATGATTTTAAT-NCCT-------------------TGTAAT---ATAA-------ATGATCAG------------------TTC--TC---TTTTAG----A
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           38988 49 +     62158 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33710 49 +     89929 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            35126 49 +     51399 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14291362 49 -  14605196 ttt--acattattttagt--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              800 23 +     22620 TTT--AAGTTATTTTCGT-NTGT-------------------Ggt----------------------------------------------------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 1
s Platanista_gangetica.PlaMin_flattened_line_32310           34609 50 +     35617 TTT--CCATGATTTTAAT-NCCT-------------------TGTAAT---ATAA-------ATGATCAG------------------TTC--TC---TTTTAG----A
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189126438 50 + 189387572 ttt--acattattttaacc-CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9566044 50 +   9816681 TTT--ACATTATTTTAACC-CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68637 49 -     81375 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                               458 49 +     19060 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2592729 50 -   4620579 TTT--AAATGATTTTAGT-NCCT-------------------AGTAAT---ATAA-------ATAATCCA------------------TTC--TG---CTTTAG----A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986742 50 +   2598838 ttt--aaattattttaat-NccT-------------------AGTAAT---TTAA-------ATCATCCA------------------TTC--TG---CTTTAA----A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          25031 50 +     38485 TTT--AAATTATTTTAAT-NCCT-------------------AGTAAT---TTAA-------ATCATCCA------------------TTC--TG---CTTTAA----A
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             1190 50 +      4256 TTT--AAATTGTTTTAAT-NCCT-------------------AGTAAT---TTAA-------ATCATCCA------------------TTC--TG---CTTTAA----A
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22550 50 +     35766 TTT--AAATTATTTTAAT-NCCT-------------------AGTAAT---TTAA-------ATCATCCA------------------TTC--TG---CTTTAA----A
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            733 50 -     24134 TTT--AAATTATTTTAAT-NCCT-------------------AGTAAT---TTAA-------ATCATCCA------------------TTC--TG---CTTTAA----A
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24545 50 -     67325 TTT--AAATTATTTTAAT-NGTT-------------------AGTAAT---TTAA-------ATCATCCA------------------TTC--TG---CTTTAA----A
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            790 50 -      6182 TTT--AAATTATTTTAAT-NCCT-------------------AGTAAT---TTAA-------ATCATCCA------------------TTC--TG---CTTTAA----A
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11578 57 -     21811 ttt--aaactattttaat-NtGT-------------------GGTAAC---ATAAAGCATAAATCATGAG------------------TTC--TG---CTTTAG----A
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         37050 48 +     42204 TTT--AAATTATGTTTAT-NCTT-------------------GATAAT-----TT-------GTCATCAG------------------CTT--TG---TTTTAG----A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22974051 50 +  28871421 ttt--aaattattttaat-Ntct-------------------ggTAAT---ATAA-------GTCATCAG------------------TTC--TG---CTTCAG----A
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                1989 50 -      8028 ttt--aaattattttaat-Ntct-------------------ggTAAT---ATAA-------GTCATCAG------------------TTC--TG---CTTCAG----A
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20270927 61 -  38429054 TTT--AAACGATTTTAAT-NCCT-------------------GTTAAT---ATAT-------Ctcatcag-------gtttttgttttttt--tt---ttttag----a
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             10469 49 -     91421 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7604597 49 +   7812017 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10438 49 -     72585 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5505 50 +     55207 TTT--CAATTATTTTAAT-NCCT-------------------TGTAAT---ACAA-------ATTATCAG------------------TTC--TC---TTTTAG----A
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        367199 50 -   3329780 ttt--aaattattttaat-Ntct-------------------gaTAAT---ATAA-------AACATCAG------------------TTC--TG---CTTTAG----A
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             2153 49 -     11128 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91231508 49 - 195417433 ttt--acattattttagt--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7667157 49 +   7961872 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85036 50 -     96226 TTT--AAATTATTTTAAT-NTCT-------------------GGTAAT---ATAA-------GTCATCAG------------------TTC--TG---CTTCAG----A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151725 64 -    313613 TTC--AGATCATTTAAAT-NATTCTAATAAATTATAT-ATATAATAAT---ATAA-------ATCAG----------------------TT--TT---ACTTAG----A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          14981 49 -     19888 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      22183 49 +     39453 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2709 49 +     27826 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             2230 49 -     19483 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      2292 49 +      7198 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         10552 49 +     15514 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            188040 50 -    191337 TTT--CAATTACTTCAGT-NATT-------------------GGCAAT---ATAC-------ATCATCAG------------------TTC--TG---CTTTAG----A
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13648208 50 -  18376816 att--aaaatatcttaat-NACT-------------------GGTAAC---AAAA-------ATCATCAT------------------TTA--TG---CTTTAA----G
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1948593 50 -   3870691 ttt--gaattattttaat-NccT-------------------GGTAAT---ATAA-------ATCACCAG------------------TTC--TA---Ctttat----a
i Spermophilus_dauricus.KZ294078.1                       I 2 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27584 50 +     97271 TTT--AAACTATTTTTAT-NCTT-------------------GATAAT---ATAT-------GTCATCAG------------------TTT--TG---CTTTAG----A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14888 50 -    196729 TTT--AAATGATTTTAAT-NCTT-------------------GATAAT---TTAT-------CTCCTCAG------------------TTT--CA---CTTTAG----A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   62882832 43 -  69701581 ttt--caattattttaac-NCCT-------------------TGTAATATTATAA-------ATTATCAC------------------TT-------------------
i Sus_scrofa.CM000828.4                                  C 0 I 41
s Symphalangus_syndactylus.tarseq_199                      1088758 50 -   1523678 TTT--ACATTATTTTAATC-CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 7190 50 +     41958 TTT--AAATTATTTTGAT-NTGT-------------------GGTAGT---ACAA-------ACCATCAG------------------TTC--TG---CTTTAG----A
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69831 50 +    116680 TTT--AAATAATTTTAAT-NCCC-------------------AATTAT---GTAA-------ATCGCCAG------------------TTC--TG---CTTTAG----A
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115581 50 -    156842 CTT--AAATTATTTTAAT-NCCT-------------------GGTAAT---ATAA-------ATCATCAG------------------TTC--TG---CTTTAG----A
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    384035 47 +    539355 CTT--AAATTATTTTAAT-NCCT-------------------GGTAAT---ATAA-------ATCATCAG------------------TTC--TG---CT---G----G
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               11029 49 +     70052 TTT---ATTTTTTTTAAT-NCCT-------------------AGTATT---ATAA-------ATGATCAG------------------TTC--TG---CTTTAG----A
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               15334 49 +     25099 TTT---ATTTTTTTTAAT-NCCT-------------------GGTATT---ATAA-------ATGATCAG------------------TTC--TG---CTTTAG----A
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186423555 49 + 186847797 ttt--acattattttagt--CTT-------------------GGtcat---ataa-------attattaa------------------ttc--tg---CTTTAG----A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103809 48 +    114563 C----AAATCATATCAGT-NCTT-------------------AGTAAT---ACAA-------ATCATCAG------------------TCC--TA---CTTTAA----A
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   2208 49 +      8208 TTG--AAATAATT-TAAG-NCCC-------------------AGTAAC---ATAA-------ATCATCAG------------------TTC--TG---CTTTAA----A
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     79326 57 +    610378 TTT--AAATTATTTTAAC-NTGT-------------------GGTACT---ATAAATCATAAATTATCAG------------------TTC--TG---CTTTAG----A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          6283 49 -     20410 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    10479 49 +     15221 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        6384 49 +     19930 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2814 49 -     19997 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42933 49 -     60166 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        10406 49 -     27529 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     10346 49 -     18194 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           4081 49 -     21137 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2784 49 -     10723 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1936 49 +      9834 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        20254 49 +     32220 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5934351 49 +   6242583 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        3598 49 +     20839 TTT--ACATTATTTTAGT--CCT-------------------GGTCAT---ATAA-------ATTATTAG------------------TTC--TG---CTTTAG----A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                   1163 50 -      1748 TTT--TAATGATTTTAAT-NCCT-------------------TGTAAC---ATAA-------ATTATCAG------------------TTC--TC---TTTTAG----A
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 C 0
s Tupaia_chinensis.KB320699.1                              2150778 50 +   4065304 ttt--aaatgattttaat-NTCT-------------------AGTAAT---ATAA-------ATCATCAG------------------TTC--TG---CTTCAG----A
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     4076 50 -     10553 TTT--AAATGATTTTAAT-NTCT-------------------AGTAAT---ATAA-------ATCATGAG------------------TTC--TG---CTTCGG----A
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15738103 50 +  33153633 TTT--CCATGATTTTAAT-NCCT-------------------TGTAAT---ATAA-------ATGATCAG------------------TTC--TC---TTTTAG----A
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   51917 59 -     77625 -------GTCATTTAAAT-NATT-----CTGATAAATTATATAATAAT---ACAA-------ATCATCAG------------------TTC--TG---CCTTAG----A
i Uropsilus_gracilis.UroGra_scaffold_12083               I 81 C 0
s Ursus_maritimus.KK499267.1                               4847292 50 -   5085361 TTC--AAATTATATTAAT-NTTT-------------------GATAAT---ATAC-------GTCATCAA------------------TTT--TG---CTTTAG----A
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   7417 50 +     50397 TTT--AAATGATTTTAGT-NCCT-------------------AGTAAT---ATAA-------ATCATCCA------------------TTC--TG---CTTTAG----A
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              7465 50 +     24756 TTT--AAATGATTTTAGT-NCCT-------------------AGTAAT---ATAA-------ATCATCCA------------------TTC--TG---CTTTAG----A
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368760 50 -   5488506 TTT--CAGCTGTTTTAAT-NTCT-------------------TGCAAT---TCAA-------ATTATCAT------------------CTC--TC---ctttag----a
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7749 53 -     43706 TTT--AAATTATTTTAAT-NCTT-------------------TATGAT---ATAG-------GTCATCAT---------------AACTGA--TG---ACCTAG----A
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        20095 50 -     24430 TTT--AAATTATTTTAAT-NCCT-------------------AGTAAT---ATAG-------ATCACCAG------------------TTC--TA---CTTTAT----A
i Xerus_inauris.XerIna_scaffold_48378                    I 2 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          2001 50 +     86975 TTT--AAATTATTTTAAT-NCTT-------------------GATAAT---ATAT-------GTCATCAG------------------TTT--TG---CCTTAG----A
i Zalophus_californianus.ZalCal_flattened_line_17732     N 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      10862  7 +     63895 Ctt--tgtt----------------------------------------------------------------------------------------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 262
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11795 50 +     12536 TTT--CCATGATTTTAAT-NCCT-------------------TGTAAT---ATAA-------ATGATCAG------------------TTC--TC---TTTTAG----A
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Galagoides_demidoff.k141_31856                              3217  0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       2048 7 +     62944 GATC-AGG
s Acinonyx_jubatus.LLWD01001279.1                           823983 5 -   1699592 aata-g--
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 2
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507427 5 -  29979442 AATT-G--
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 2
s Ailurus_fulgens.LNAC01001112.1                             76002 5 -    347723 AATT-G--
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 2
s Allactaga_bullata.AllBul_scaffold_9566                     65371 2 -     89534 ---T-G--
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 376
s Allenopithecus_nigroviridis.k141_3361533                   10027 7 -     52922 GTTT-AGG
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9958 7 -     28001 GATT-AGG
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                           404 7 -     18505 GATT-AGG
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           1253 7 -     12518 GATT-AGG
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675783 5 -   2318259 AATT-A--
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 2
s Anoura_caudifer.AnoCau_scaffold_1412                      183521 5 +    412891 GACG-G--
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 2
s Antilocapra_americana.AntAmePen_scaffold_12469             98265 5 -    100397 AATT-A--
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 I 2
s Aplodontia_rufa.AprRuf_scaffold_68852                       7667 5 +     20879 GAGT-A--
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14841 7 +     17124 GAAT-GGG
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2878 5 +     43469 GATG-G--
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 2
s Avahi_laniger.k141_765380                                  49721 7 -     92717 GATT-AGG
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              50346 7 +     85213 GATT-AGG
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15192010 5 +  23207421 AATT-A--
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 2
s Balaenoptera_bonaerensis.DF707048.1                         2475 5 -     18090 AATT-A--
i Balaenoptera_bonaerensis.DF707048.1                    C 0 I 2
s Beatragus_hunteri.BeaHun_scaffold_50177                    26705 5 +     34529 AATT-A--
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 2
s Bison_bison.KN261452.1                                    199762 5 -    288883 AATT-A--
i Bison_bison.KN261452.1                                 C 0 I 2
s Bos_indicus.CM003047.1                                  20272967 5 +  48749331 AATT-A--
i Bos_indicus.CM003047.1                                 C 0 I 2
s Bos_mutus.JH880303.1                                     1125523 5 -   1948126 AATT-A--
i Bos_mutus.JH880303.1                                   C 0 I 2
s Bos_taurus.CM000203.6                                   18083605 5 +  45695690 AATT-A--
i Bos_taurus.CM000203.6                                  C 0 I 2
s Bubalus_bubalis.KI419123.1                               2819272 5 +   4408762 AATT-A--
i Bubalus_bubalis.KI419123.1                             C 0 I 2
s Camelus_bactrianus.KN276810.1                            9999319 5 -  17673402 GATT-A--
i Camelus_bactrianus.KN276810.1                          C 0 I 2
s Camelus_dromedarius.KN272107.1                           2331783 5 -   7040546 GATT-A--
i Camelus_dromedarius.KN272107.1                         C 0 I 2
s Camelus_ferus.KB017975.1                                  400059 5 -   1652518 GATT-A--
i Camelus_ferus.KB017975.1                               C 0 I 2
s CanFam4.chr16                                           17796179 5 -  60362399 AATT-G--
i CanFam4.chr16                                          C 0 I 2
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182236 5 -    185531 AATT-G--
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 I 2
s Canis_lupus_dingo.QKWQ01000480.1                         9031622 5 -   9314153 AATT-G--
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 2
s Canis_lupus_familiaris.chr16                            17955887 5 -  59632846 AATT-G--
i Canis_lupus_familiaris.chr16                           C 0 I 2
s Canis_lupus_orion.HG994398.1                            18497187 5 +  63665305 AATT-G--
i Canis_lupus_orion.HG994398.1                           C 0 I 2
s Capra_aegagrus.CM003241.1                               18829901 5 +  46296322 AATT-A--
i Capra_aegagrus.CM003241.1                              C 0 I 2
s Capra_hircus.CM004588.1                                 18060621 5 -  44709034 AATT-A--
i Capra_hircus.CM004588.1                                C 0 I 2
s Carlito_syrichta.NW_007259797.1                           141465 7 -    496798 GATT-CAA
i Carlito_syrichta.NW_007259797.1                        C 0 I 9
s Carollia_perspicillata.CarPer_scaffold_92756                3295 5 -     11696 GATG-G--
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 2
s Castor_canadensis.CasCan_scaffold_2074                    134051 5 +    179628 gatt-a--
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 205
s Catagonus_wagneri.CatWag_scaffold_2839                     89664 5 +    217609 AATT-A--
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 2
s Cavia_aperea.AVPZ01000300.1                             18348068 4 -  23392119 GA--GT--
i Cavia_aperea.AVPZ01000300.1                            I 5 I 3
s Cavia_porcellus.DS562891.1                              18360328 4 -  23407841 GA--GT--
i Cavia_porcellus.DS562891.1                             I 5 I 3
s Cavia_tschudii.CavTsc_scaffold_8919                        99202 4 +    143979 GA--GT--
i Cavia_tschudii.CavTsc_scaffold_8919                    I 5 I 3
s Cephalopachus_bancanus.k141_2037105                         5380 7 -      8605 GATT-CAA
i Cephalopachus_bancanus.k141_2037105                    C 0 I 9
s Ceratotherium_simum.JH767749.1                          12228296 5 +  27778364 GATT-G--
i Ceratotherium_simum.JH767749.1                         C 0 I 2
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          3014 5 -      3715 GATT-G--
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 I 2
s Cercocebus_atys.KQ010504.1                               4470987 7 +   4669795 GATT-AGG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         9536 7 -     19203 GATT-AGG
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3957 7 +      8260 GATT-AGG
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           4185 7 +     27781 GATT-AGG
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         4343 7 -     20310 GATT-AGG
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           7327 7 +     29689 GATT-AGG
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            1765 7 +      9989 GATT-AGG
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          10011 7 -     27936 GATT-AGG
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                            10037 7 -     11289 GATT-AGG
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38812409 7 +  39242232 GATT-AGG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21218108 7 -  21565898 GATT-AGG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       35227 7 -     53127 GATT-AGG
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        2512 7 +      7159 GATT-AGG
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       10030 7 -     27947 GATT-AGG
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         10006 7 +     17596 GATT-AGG
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         40506 7 -     41420 GATT-AGG
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            5196 5 -      6351 GATT-A--
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 I 2
s Cheirogaleus_major.k141_333249                             17137 7 -     52598 GATT-AGG
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12487 7 +     57038 GATT-AGG
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1251405 4 +   2543920 GA--TT--
i Chinchilla_lanigera.JH722012.1                         C 0 I 3
s Chlorocebus_aethiops.ctg25                              18423969 7 -  18827391 GATT-AGG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       10410 7 -     50209 GATT-AGG
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135417418 7 + 135778131 GATT-AGG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15576 5 +     19366 GATT-A--
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 I 2
s Choloepus_hoffmanni.KN194906.1                            170675 5 +    839153 GATT-A--
i Choloepus_hoffmanni.KN194906.1                         C 0 I 2
s Colobus_angolensis.KN981557.1                            1905925 7 +   2368649 GATT-AGG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199945594 7 + 200372422 GATT-AGG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              32466 7 +     84244 GATT-AGG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17546736 5 -  53390261 AATT-A--
i Condylura_cristata.JH655891.1                          I 21 I 2
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10928 5 -     20389 GATT-G--
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 20 I 2
s Crocidura_indochinensis.CroInd_scaffold_287352               918 5 +      4208 GGTT-A--
i Crocidura_indochinensis.CroInd_scaffold_287352         I 37 I 2
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24875 5 -     87169 AATT-G--
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 2
s Cuniculus_paca.CunPac_flattened_line_231100                 3477 4 +      5455 GA--TT--
i Cuniculus_paca.CunPac_flattened_line_231100            I 5 I 3
s Dasyprocta_punctata.DasPun_flattened_line_206793            1830 4 +      3576 GA--TT--
i Dasyprocta_punctata.DasPun_flattened_line_206793       I 5 I 3
s Dasypus_novemcinctus.JH564415.1                            61467 5 +   2246927 GATT-A--
i Dasypus_novemcinctus.JH564415.1                        C 0 I 2
s Daubentonia_madagascariensis.ctg71                      12533308 7 -  12879189 GATT-AGG
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811645 5 +  35494412 AATT-A--
i Delphinapterus_leucas.KZ290073.1                       C 0 I 2
s Desmodus_rotundus.KZ672289.1                             8628327 5 +  20541912 GATC-G--
i Desmodus_rotundus.KZ672289.1                           C 0 I 2
s Dicerorhinus_sumatrensis.PEKH010002091.1                  670149 5 +   1390856 GATT-G--
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 2
s Diceros_bicornis.DicBicMic_scaffold_5955                    2904 5 +    198055 GATT-G--
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 2
s Dinomys_branickii.DinBra_scaffold_21862                    34890 4 +     67921 GA--TT--
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 3
s Dipodomys_ordii.KN672350.1                              18896211 5 +  37912305 GATT-A--
i Dipodomys_ordii.KN672350.1                             C 0 I 278
s Dipodomys_stephensi.DipSte_scaffold_75855                  12429 5 +     14536 GATT-A--
i Dipodomys_stephensi.DipSte_scaffold_75855              C 0 I 275
s Dolichotis_patagonum.DolPat_scaffold_30833                 32078 4 -     42551 GA--AT--
i Dolichotis_patagonum.DolPat_scaffold_30833             I 5 I 3
s Eidolon_helvum.KE759718.1                                   7833 5 +     11740 GATT-G--
i Eidolon_helvum.KE759718.1                              C 0 I 2
s Elaphurus_davidianus.JRFZ01104969.1                       310936 5 +    607251 AATT-A--
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 2
s Enhydra_lutris.KZ291758.1                               16326189 5 -  41312741 AATT-G--
i Enhydra_lutris.KZ291758.1                              C 0 I 2
s Equus_asinus.JREZ01000139.1                              1280188 5 +   4378816 GATT-G--
i Equus_asinus.JREZ01000139.1                            C 0 I 2
s Equus_caballus.CM000403.2                               18528009 5 -  39960074 GATT-G--
i Equus_caballus.CM000403.2                              C 0 I 2
s Equus_przewalskii.KK951119.1                               30024 5 +    498745 GATT-G--
i Equus_przewalskii.KK951119.1                           C 0 I 2
s Erythrocebus_patas.Contig38                             21200600 7 -  21539334 GATT-AGG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11321 5 +    133382 AATT-A--
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 2
s Eubalaena_japonica.EubJap_flattened_line_31514             25258 5 -     44125 AATT-A--
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 I 2
s Eulemur_albifrons.k141_342033                               9818 7 -     14127 GATT-AGG
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                2516 7 -     16928 GATT-AGG
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              11549 7 -     25546 GATT-AGG
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             8734 7 +     26330 GATT-AGG
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                  9991 7 +     23973 GATT-AGG
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 8734 7 +     75513 GATT-AGG
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  6686 7 +     97555 GATT-AGG
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                             9612 7 +     26496 GATT-AGG
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                   218 7 -     17153 GATT-AGG
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                               9797 7 +    111500 GATT-AGG
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20233843 5 + 206538554 aata-g--
i Felis_catus.CM001381.2                                 C 0 I 2
s Felis_catus_fca126.CM031415.1                           20192690 5 + 205367284 aata-a--
i Felis_catus_fca126.CM031415.1                          C 0 I 2
s Felis_nigripes.FelNig_flattened_line_20823                  6203 5 -     36744 AATA-G--
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 2
s Galeopterus_variegatus.GalVar_scaffold_266699                 18 7 +      2098 GGTT-AGG
i Galeopterus_variegatus.GalVar_scaffold_266699          N 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     608901 5 -    660261 aatt-a--
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 I 2
s Glis_glis.GliGli_scaffold_19807                            30757 5 +     49224 GATT-A--
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              11283 7 -     32273 GATC-AGG
i Gorilla_beringei.k141_3596273                          I 50 C 0
s Gorilla_gorilla.LT578341.1                             186333431 7 + 186649187 GATC-AGG
i Gorilla_gorilla.LT578341.1                             I 50 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   30479 5 +     78134 TATT-A--
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           2882 7 -     19426 GATT-AGG
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              8026 7 -     15286 GATT-AGG
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                              9664 7 +     18253 GATT-AGG
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                          9767 7 -     41752 GATT-AGG
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                          9600 7 -     16460 GATT-AGG
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238799 5 +    327341 AATT-A--
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 2
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18105 5 +     36099 AATT-A--
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 I 2
s Heterocephalus_glaber.JH602082.1                        20659961 4 +  22651954 GA--TT--
i Heterocephalus_glaber.JH602082.1                       C 0 I 3
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112458 5 +    128679 AATT-A--
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 I 2
s Hipposideros_armiger.JXIK01000431.1                       108702 5 +   1711038 GATT-A--
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 2
s Hipposideros_galeritus.HipGal_scaffold_29171               40143 5 +     43066 GATT-A--
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 I 2
s Hoolock_leuconedys.ctg274                                    430177 7 +    630532 GATT-AGG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  41330 5 +     55795 AATT-G--
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 2
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20454 4 -    143317 GA--TT--
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 5 I 3
s Hylobates_agilis.k141_307679                               13109 7 -     15490 GATT-AGG
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              55114 7 +     67168 GATT-AGG
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189538764 7 - 191637585 GATT-AGG
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3331657 7 -  11177569 GATT-AGG
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      81540 5 +    135385 GATT-T--
i Hystrix_cristata.HysCri_scaffold_5660                  I 5 I 2
s Ictidomys_tridecemlineatus.JH393364.1                    7515005 5 -   7955117 gaga-a--
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   18583 7 +     31101 GATC-AGG
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22862 5 +     23964 AATT-A--
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 I 2
s Jaculus_jaculus.JH725527.1                               8271755 2 -   9596543 ---t-g--
i Jaculus_jaculus.JH725527.1                             C 0 I 367
s Kogia_breviceps.KogBre_flattened_line_192630                2224 5 -      3359 AATT-A--
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 I 2
s Lemur_catta.scaffold_24                                 15520126 7 -  30322482 GATT-AGG
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          7038 7 -     23766 GATT-AGG
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24985 7 +     45836 GATT-AGG
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31897 7 -     32627 GATT-AGG
i Lepilemur_ruficaudatus.k141_420445                     I 49 I 29
s Lepilemur_septentrionalis.k141_185316                      23040 7 +     54090 GATT-AGG
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3039338 5 +   3914936 AATT-G--
i Leptonychotes_weddellii.KB714746.1                     C 0 I 2
s Lipotes_vexillifer.KE559953.1                             267914 5 -    662738 AATT-A--
i Lipotes_vexillifer.KE559953.1                          C 0 I 2
s Lophocebus_aterrimus.ctg367                              1432531 7 +   1826925 GATT-AGG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            1101 1 +     11245 G-------
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999938 1 +   6120653 G-------
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17952127 5 -  59628241 AATT-G--
i Lycaon_pictus.CM007581.1                               C 0 I 2
s Macaca_arctoides.k141_2326796                               2352 7 +     40492 GATT-AGG
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59671607 7 +  60120075 GATT-AGG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  8107 7 -     26193 GATT-AGG
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75904 7 -    114318 GATT-AGG
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  1619 7 -     23192 GATT-AGG
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                11072 7 -     29190 GATT-AGG
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  19639 7 +     37952 GATT-AGG
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834727 7 + 187317192 GATT-AGG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25453290 7 -  25927173 GATT-AGG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  75488 7 +     89720 GATT-AGG
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 2486 7 +     20474 GATT-AGG
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   2287 7 -     14993 GATT-AGG
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  325159 7 -    668171 GATT-AGG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                  590 7 -     24072 GATT-AGG
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               21226 7 -     45290 GATT-AGG
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87930 5 +     94391 GATT-G--
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 2
s Mandrillus_leucophaeus.scaffold280                      23932775 7 -  24302211 GATT-AGG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346952 7 +    752769 GATT-AGG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              16011 5 +    737560 GATT-T--
i Manis_javanica.JSZB01003497.1                          C 0 I 2
s Manis_pentadactyla.KN006162.1                              47400 5 -    317179 GATC-T--
i Manis_pentadactyla.KN006162.1                          C 0 I 2
s Marmota_marmota.CZRN01000018.1                          33097855 5 -  40650429 gaaa-a--
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         7209 5 -    207569 GATT-G--
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 2
s Mellivora_capensis.MelCap_flattened_line_69365              6902 5 +     13704 AATT-G--
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 2
s Mesoplodon_bidens.MesBid_scaffold_108144                    3530 5 +     10310 AATT-A--
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 I 2
s Microcebus_murinus.CM007674.1                           18287522 7 -  93316391 GATT-AGG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13838 5 -     19307 GATT-G--
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 2
s Miopithecus_ogouensis.k141_534055                           4525 7 -     28506 GATT-AGA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         2174 5 -      8324 AATT-G--
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 2
s Mirza_zaza.k141_952172                                      5090 7 -     37649 GATT-AGG
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    27035 5 -    437263 AATT-A--
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 2
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138241 5 -    366855 GACT-G--
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 2
s Moschus_moschiferus.MosMos_scaffold_13123                    987 5 +     82753 AATT-A--
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 2
s Mungos_mungo.MunMun_flattened_line_23663                   32030 5 +     37127 AATT-G--
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 2
s Muscardinus_avellanarius.MusAve_scaffold_82313              2750 5 +     14296 GATT-A--
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               298087 5 -  14710649 AATT-G--
i Mustela_putorius.JH418006.1                            C 0 I 2
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186527 5 +    196477 GATT-A--
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 I 2
s Nannospalax_galili.KL204047.1                            2026050 5 -   3037898 NNNN-N--
i Nannospalax_galili.KL204047.1                          I 36 T 841
s Nasalis_larvatus.k141_413338                               10525 7 +     21681 GATT-AGG
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865991 5 +   7148211 AATT-A--
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 2
s Noctilio_leporinus.NocLep_scaffold_251                    756794 5 +    783361 AATT-G--
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 2
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146388 5 -   9404916 AATT-G--
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 2
s Nycticebus_bengalensis.LG01                            102574902 7 - 196305487 GACT-GGG
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2588 7 +      8486 GACT-GGG
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105745329 7 + 199412804 GACT-GGG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1359047 5 +   3988456 GATT-A--
i Ochotona_princeps.JH802162.1                           C 0 I 13
s Odobenus_rosmarus.KB229312.1                              503480 5 -   2017862 AATT-G--
i Odobenus_rosmarus.KB229312.1                           C 0 I 2
s Odocoileus_virginianus.KZ100018.1                         145307 5 +    630418 AATT-A--
i Odocoileus_virginianus.KZ100018.1                      C 0 I 2
s Okapia_johnstoni.LVCL01S0005463.1                          76818 5 -    150152 AATT-A--
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 2
s Orcinus_orca.KB316932.1                                  2781906 5 -  10937097 AATT-A--
i Orcinus_orca.KB316932.1                                C 0 I 2
s Otocyon_megalotis.JAEUCK010005147.1                       459141 5 -    559221 TATT-G--
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 2
s Ovis_aries.CM001607.2                                   17586080 5 +  44047080 AATT-A--
i Ovis_aries.CM001607.2                                  C 0 I 2
s Ovis_canadensis.OviCan_scaffold_2572                      174057 5 -    191736 AATT-A--
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 I 2
s Pan_paniscus.KQ411613.1                                    39400 7 +     80009 GATC-AGG
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03001836.1                             25317 7 +     51860 GATC-AGG
i Pan_troglodytes.NBAG03001836.1                         C 0 I 298
s Panthera_onca.PanOnc_flattened_line_3271                  147857 5 +    230217 AATA-G--
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 2
s Panthera_pardus.KV860321.1                                261064 5 +  18783137 aata-g--
i Panthera_pardus.KV860321.1                             C 0 I 2
s Panthera_tigris.KE722367.1                               4717701 5 -   8748460 aata-g--
i Panthera_tigris.KE722367.1                             C 0 I 2
s Pantholops_hodgsonii.KE114653.1                          1264974 5 -   2937107 AATT-A--
i Pantholops_hodgsonii.KE114653.1                        C 0 I 2
s Papio_anubis.CM001495.2                                183438560 7 + 183742232 GATT-AGG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             2253 7 +     20448 GATT-AGG
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20559058 7 +  20919399 GATT-AGG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                    996 7 +     41871 GATT-AGG
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     4282 7 +     27711 GATT-AGG
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  4367 7 +      9205 GATT-AGG
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9516 5 -     78924 AATT-G--
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 2
s Perodicticus_ibeanus.k141_855320                            5077 7 +     13100 GACT-GGG
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             3450 7 +     25941 GACT-GGG
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_34437       25685 5 +     32600 GATT-A--
i Perognathus_longimembris.PerPac_flattened_line_34437   C 0 I 60
s Petromus_typicus.PetTyp_scaffold_42190                     26722 4 -     29689 GA--AT--
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 I 3
s Phocoena_phocoena.PhoPho_flattened_line_24159               8953 5 +     63832 AATT-A--
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 2
s Piliocolobus_badius.k141_1234363                           39037 7 +     62158 GATT-AGG
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33759 7 +     89929 GATT-AGG
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            35175 7 +     51399 GATT-AGG
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14291411 7 -  14605196 GATT-AGG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34659 5 +     35617 AATT-A--
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 I 2
s Pongo_abelii.CM009266.2                                189126488 7 + 189387572 GATT-AGG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9566094 7 +   9816681 GATT-AGG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68686 7 -     81375 GATT-AGG
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                               507 7 +     19060 GATT-AGG
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2592779 7 -   4620579 GATT-AGG
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986792 7 +   2598838 GATT-AGG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          25081 7 +     38485 GATT-AGG
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             1240 7 +      4256 GATT-AGG
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22600 7 +     35766 GATT-AGG
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            783 7 -     24134 GATT-AGG
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24595 7 -     67325 GATT-AGG
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            840 7 -      6182 GATT-AGG
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11635 5 -     21811 GATT-G--
i Pteronotus_parnellii.KE909381.1                        C 0 I 2
s Pteronura_brasiliensis.PteBra_flattened_line_31117         37098 5 +     42204 AATT-G--
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 2
s Pteropus_alecto.KB030862.1                              22974101 5 +  28871421 GATT-G--
i Pteropus_alecto.KB030862.1                             C 0 I 2
s Pteropus_vampyrus.KN534172.1                                2039 5 -      8028 GATT-G--
i Pteropus_vampyrus.KN534172.1                           C 0 I 2
s Puma_concolor.QAVW01001104.1                            20270988 5 -  38429054 aata-g--
i Puma_concolor.QAVW01001104.1                           C 0 I 2
s Pygathrix_cinerea.k141_1153803                             10518 7 -     91421 GATT-AGG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7604646 7 +   7812017 GATT-AGG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10487 7 -     72585 GATT-AGG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5555 5 +     55207 AATT-A--
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 2
s Rhinolophus_sinicus.LVEH01000134.1                        367249 5 -   3329780 GATT-A--
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 2
s Rhinopithecus_bieti.k119_217274                             2202 7 -     11128 GATT-AGG
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91231557 7 - 195417433 GATT-AGG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7667206 7 +   7961872 GATT-AGG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85086 5 -     96226 GATT-G--
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 2
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151789 5 -    313613 AATT-A--
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 2
s Semnopithecus_entellus.k141_11662                          15030 7 -     19888 GATT-AGG
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      22232 7 +     39453 GATT-AGG
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2758 7 +     27826 GATT-AGG
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             2279 7 -     19483 GATT-AGG
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      2341 7 +      7198 GATT-AGG
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         10601 7 +     15514 GATT-AGG
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            188090 5 -    191337 GACT-A--
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 I 2
s Sorex_araneus.JH798187.1                                13648258 5 -  18376816 GATT-A--
i Sorex_araneus.JH798187.1                               C 0 I 2
s Spermophilus_dauricus.KZ294078.1                         1948643 5 -   3870691 gaga-a--
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27634 5 +     97271 AATT-G--
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 2
s Suricata_suricatta.SurSur_flattened_line_6629              14938 5 -    196729 AATT-G--
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 2
s Sus_scrofa.JH118708.1                                      32157 5 -     47482 AATT-A--
i Sus_scrofa.JH118708.1                                  n 41 I 2
s Symphalangus_syndactylus.tarseq_199                      1088808 7 -   1523678 GATT-AGG
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 7240 5 +     41958 GATT-G--
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 2
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69881 5 +    116680 GATT-A--
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 I 2
s Tapirus_indicus.TapInd_scaffold_9301                      115631 5 -    156842 GATT-G--
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 2
s Tapirus_terrestris.TapTer_scaffold_755                    384082 5 +    539355 GATT-G--
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 2
s Tarsius_lariang.k141_2201908                               11078 7 +     70052 GATT-CAA
i Tarsius_lariang.k141_2201908                           C 0 I 9
s Tarsius_wallacei.k141_780063                               15383 7 +     25099 GATT-CAA
i Tarsius_wallacei.k141_780063                           C 0 I 9
s Theropithecus_gelada.CM009954.1                        186423604 7 + 186847797 GATT-AGG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103857 4 +    114563 GA--TT--
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 6
s Tolypeutes_matacus.TolMat_scaffold_228639                   2257 5 +      8208 GATT-A--
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 I 2
s Tonatia_saurophila.TonSau_scaffold_294                     79383 5 +    610378 GATG-G--
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 2
s Trachypithecus_auratus.k141_722599                          6332 7 -     20410 GATT-AGG
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    10528 7 +     15221 GATT-AGG
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        6433 7 +     19930 GATT-AGG
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2863 7 -     19997 GATT-AGG
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42982 7 -     60166 GATT-AGG
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        10455 7 -     27529 GATT-AGG
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     10395 7 -     18194 GATT-AGG
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           4130 7 -     21137 GATT-AGG
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2833 7 -     10723 GATT-AGG
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1985 7 +      9834 GATT-AGG
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        20303 7 +     32220 GATT-AGG
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5934400 7 +   6242583 GATT-AGG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        3647 7 +     20839 GATT-AGG
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                   1213 5 -      1748 AATT-G--
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 I 2
s Tupaia_chinensis.KB320699.1                              2150828 5 +   4065304 GATC-A--
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     4126 5 -     10553 GATT-A--
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15738153 5 +  33153633 AATT-A--
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 2
s Uropsilus_gracilis.UroGra_scaffold_12083                   51976 4 -     77625 -ATT-A--
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 2
s Ursus_maritimus.KK499267.1                               4847342 5 -   5085361 AATT-G--
i Ursus_maritimus.KK499267.1                             C 0 I 2
s Varecia_rubra.k141_590885                                   7467 7 +     50397 GATT-AGG
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              7515 7 +     24756 GATT-AGG
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368810 5 -   5488506 aatt-a--
i Vicugna_pacos.KN270157.1                               C 0 I 2
s Vulpes_lagopus.VulLag_flattened_line_30954                  7802 5 -     43706 AATT-G--
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 2
s Xerus_inauris.XerIna_scaffold_48378                        20145 5 -     24430 AAGA-A--
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          2051 5 +     86975 AATT-G--
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 2
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11845 5 +     12536 AATT-A--
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 I 2
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906 0 -     10935 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      10869 262 +     63895 I
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Procavia_capensis.ProCapCap_scaffold_85530                 10240 0 -     22811 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823 1 +     22620 I
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016 1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456 1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390 1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692 1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520 1 +     14753 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686 0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Loxodonta_africana.GL010049.1                            4214777 0 -  43346337 C
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491 0 +       961 C
e Galagoides_demidoff.k141_31856                              3217 0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Erinaceus_europaeus.JH835339.1                           3326521 0 -   7059049 C
e Eptesicus_fuscus.JH977646.1                              2144447 1 -  14770903 I
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089268 0 +  10337057 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       2055 30 +     62944 A--AATTGATGCA-------------------T-T-T-CAT--T-TTT--GCATTTAAC
s Acinonyx_jubatus.LLWD01001279.1                           823990 29 -   1699592 t--aatttgtgca-------------------t-t-ttc----t-ctt--aaaattaat
i Acinonyx_jubatus.LLWD01001279.1                        I 2 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507434 27 -  29979442 C--AATTTGCGCA-------------------A-C-TGc----c-ttt--aaattta--
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 2 C 0
s Ailurus_fulgens.LNAC01001112.1                             76009 27 -    347723 C--AATTTGTGCA-------------------A-C-TGc----c-ttt--aaattta--
i Ailurus_fulgens.LNAC01001112.1                         I 2 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     65749 29 -     89534 A--AATCTTTACA-------------------T-T-TAT----T-ATT--TCTCTTTAT
i Allactaga_bullata.AllBul_scaffold_9566                 I 376 C 0
s Allenopithecus_nigroviridis.k141_3361533                   10034 30 -     52922 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9965 30 -     28001 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                           411 30 -     18505 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           1260 30 -     12518 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675790 29 -   2318259 A--AACTGGTACA-------------------c-t-tgt----t-ctt--tcatttagc
i Ammotragus_lervia.NIVO01071767.1                       I 2 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183528 29 +    412891 A--AATGGGTACA-------------------T-T-TGt----t-ctt--tcatttaac
i Anoura_caudifer.AnoCau_scaffold_1412                   I 2 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             98272 29 -    100397 A--AACTGGTACC-------------------C-T-TGT----T-CTT--TCACCTAGC
i Antilocapra_americana.AntAmePen_scaffold_12469         I 2 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7672 31 +     20879 AGAATTTGATGCA-------------------C-A-TAT----T-CTT--TCATTTAAC
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14848 29 +     17124 A--AATTGATGTG-------------------T-T-CAT----T-CTT--TCACTTACC
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2885 29 +     43469 A--AATGGGTACA-------------------T-T-TGT----T-CCT--TCATTTAAC
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 2 C 0
s Avahi_laniger.k141_765380                                  49728 29 -     92717 A--AATTGATGCa-------------------t-t-cat----t-ctt--tcatttaac
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              50353 29 +     85213 A--AATTGATGCa-------------------t-t-cat----t-ctt--tcatttaac
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15192017 29 +  23207421 A--AATTGGTGCA-------------------T-T-TGC----t-ctt--tcatctagc
i Balaenoptera_acutorostrata.KI537508.1                  I 2 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2482 29 -     18090 A--AATTGGTGCA-------------------T-T-TGC----t-ctt--tcatttagc
i Balaenoptera_bonaerensis.DF707048.1                    I 2 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26712 29 +     34529 A--AACTGGTACA-------------------C-T-TGT----T-CTT--TCATTTAGC
i Beatragus_hunteri.BeaHun_scaffold_50177                I 2 C 0
s Bison_bison.KN261452.1                                    199769 29 -    288883 A--ATCTGGTACA-------------------c-t-tgt----t-ctt--tcatttagc
i Bison_bison.KN261452.1                                 I 2 C 0
s Bos_indicus.CM003047.1                                  20272974 29 +  48749331 A--ATCTGGTACA-------------------c-t-tgt----t-ctt--tcatttagc
i Bos_indicus.CM003047.1                                 I 2 C 0
s Bos_mutus.JH880303.1                                     1125530 29 -   1948126 A--ATCTGGTACA-------------------c-t-tgt----t-ctt--tcatttagc
i Bos_mutus.JH880303.1                                   I 2 C 0
s Bos_taurus.CM000203.6                                   18083612 29 +  45695690 A--ATCTGGTACA-------------------c-t-tgt----t-ctt--tcatttagc
i Bos_taurus.CM000203.6                                  I 2 C 0
s Bubalus_bubalis.KI419123.1                               2819279 29 +   4408762 A--ATCTGGTACA-------------------c-t-tgt----t-ctt--tcatttagc
i Bubalus_bubalis.KI419123.1                             I 2 C 0
s Camelus_bactrianus.KN276810.1                            9999326 29 -  17673402 A--AATGGGTGCA-------------------T-T-TGC----T-TTC--ACATTtagc
i Camelus_bactrianus.KN276810.1                          I 2 C 0
s Camelus_dromedarius.KN272107.1                           2331790 29 -   7040546 A--AATGGGTGCA-------------------T-T-TGC----T-TTC--ACATTtagc
i Camelus_dromedarius.KN272107.1                         I 2 C 0
s Camelus_ferus.KB017975.1                                  400066 29 -   1652518 A--AATGGGTGCA-------------------T-T-TGC----T-TTC--ACATTtagc
i Camelus_ferus.KB017975.1                               I 2 C 0
s CanFam4.chr16                                           17796186 29 -  60362399 T--AATTTGTGCA-------------------T-T-TGC----T-CTT--AAATTTAAT
i CanFam4.chr16                                          I 2 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182243 29 -    185531 C--AATTTGTGCA-------------------T-T-TGC----T-CTT--AAATTTAAT
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 2 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031629 29 -   9314153 T--AATTTGTGCA-------------------T-T-TGC----T-Ctt--aaatttaat
i Canis_lupus_dingo.QKWQ01000480.1                       I 2 C 0
s Canis_lupus_familiaris.chr16                            17955894 29 -  59632846 C--AATTTGTGCA-------------------T-T-TGC----T-Ctt--aaatttaat
i Canis_lupus_familiaris.chr16                           I 2 C 0
s Canis_lupus_orion.HG994398.1                            18497194 29 +  63665305 C--AATTTGTGCA-------------------T-T-TGC----T-Ctt--aaatttaat
i Canis_lupus_orion.HG994398.1                           I 2 C 0
s Capra_aegagrus.CM003241.1                               18829908 29 +  46296322 A--AACTGGTACA-------------------c-t-tgt----t-ctt--tcatttagc
i Capra_aegagrus.CM003241.1                              I 2 C 0
s Capra_hircus.CM004588.1                                 18060628 29 -  44709034 A--AACTGGTACA-------------------c-t-tgt----t-ctt--tcatttagc
i Capra_hircus.CM004588.1                                I 2 C 0
s Carlito_syrichta.NW_007259797.1                           141481  8 -    496798 ---------------------------------------------------catttaac
i Carlito_syrichta.NW_007259797.1                        I 9 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                3302 29 -     11696 A--AATGGGTACA-------------------T-T-GGt----t-ctt--tcatttaac
i Carollia_perspicillata.CarPer_scaffold_92756           I 2 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89671 29 +    217609 A--AGTTGGTGCC-------------------T-T-TGC----T-TTt--tcatttagc
i Catagonus_wagneri.CatWag_scaffold_2839                 I 2 C 0
s Cavia_aperea.AVPZ01000300.1                             18348075 29 -  23392119 A--AATCGatgca-------------------t-t-tat----t-ctt--tcatttaag
i Cavia_aperea.AVPZ01000300.1                            I 3 C 0
s Cavia_porcellus.DS562891.1                              18360335 29 -  23407841 A--AATCGatgca-------------------t-t-tat----t-ctt--tcatttaag
i Cavia_porcellus.DS562891.1                             I 3 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        99209 29 +    143979 A--AATCGATGCA-------------------T-T-TAT----T-CTT--TCATTTAAG
i Cavia_tschudii.CavTsc_scaffold_8919                    I 3 C 0
s Cephalopachus_bancanus.k141_2037105                         5396  8 -      8605 ---------------------------------------------------CATTTAAC
i Cephalopachus_bancanus.k141_2037105                    I 9 C 0
s Ceratotherium_simum.JH767749.1                          12228303 29 +  27778364 A--AATTGGTGCA-------------------T-T-TGC----t-ctt--tccttcaac
i Ceratotherium_simum.JH767749.1                         I 2 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          3021 29 -      3715 A--AATTGGTGCA-------------------T-T-TGC----T-CTT--TCCTTCAAC
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     I 2 C 0
s Cercocebus_atys.KQ010504.1                               4470994 30 +   4669795 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         9543 30 -     19203 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3964 30 +      8260 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           4192 30 +     27781 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         4350 30 -     20310 A--AATTGATTCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           7334 30 +     29689 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            1772 30 +      9989 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          10018 30 -     27936 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                            10044 30 -     11289 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38812416 30 +  39242232 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21218115 30 -  21565898 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       35234 30 -     53127 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        2519 30 +      7159 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       10037 30 -     27947 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         10013 30 +     17596 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         40513 30 -     41420 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            5203 29 -      6351 C--AAGTGGTACA-------------------G-T-CAC----T-CT-TT-TATTTACC
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       I 2 I 88
s Cheirogaleus_major.k141_333249                             17144 29 -     52598 A--AATCGACGCG-------------------T-T-Cat----t-ctt--tcatttaac
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12494 29 +     57038 A--AATCGACACA-------------------T-T-Cat----t-ctt--tcatttaac
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1251412 29 +   2543920 G--AATTGATGCA-------------------T-T-TAC----T-CTt--ccatttaaa
i Chinchilla_lanigera.JH722012.1                         I 3 C 0
s Chlorocebus_aethiops.ctg25                              18423976 30 -  18827391 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       10417 30 -     50209 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135417425 30 + 135778131 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15583 30 +     19366 A--AATTGGTACA-------------------T-T-CAC----T-CTTT-TTATTTAAC
i Choloepus_didactylus.ChoDid_scaffold_45914             I 2 C 0
s Choloepus_hoffmanni.KN194906.1                            170682 30 +    839153 A--AATTGGTACA-------------------T-T-CAC----T-CTT-tttatttaac
i Choloepus_hoffmanni.KN194906.1                         I 2 C 0
s Colobus_angolensis.KN981557.1                            1905932 30 +   2368649 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GTATTTCAC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199945601 30 + 200372422 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTCAC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              32473 30 +     84244 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTCAC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17546743 28 -  53390261 A---ATTGGTGCC-------------------T-C-TGT----T-TAT--TCaaccaac
i Condylura_cristata.JH655891.1                          I 2 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10935 29 -     20389 A--AGATGGTGTA-------------------T-T-TTT----C-CTT--TAATTTTAT
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 2 C 0
s Crocidura_indochinensis.CroInd_scaffold_287352               925 29 +      4208 A--AATTGATACC-------------------T-T-TGC----T-CTT--TCATTTGAC
i Crocidura_indochinensis.CroInd_scaffold_287352         I 2 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24882 30 -     87169 T--AATGTGTGCA-------------------T-TTTTC----T-CTC--AAAATTAAC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 2 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 3484 29 +      5455 A--AATTGATGCA-------------------T-T-TAT----T-CTT--TCATTTATG
i Cuniculus_paca.CunPac_flattened_line_231100            I 3 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1837 29 +      3576 A--AATTGATGCA-------------------T-T-TAT----T-CTT--CTATTTAGA
i Dasyprocta_punctata.DasPun_flattened_line_206793       I 3 C 0
s Dasypus_novemcinctus.JH564415.1                            61474 26 +   2246927 C--AAGTGGT-CA-------------------T-T-CAC----T-Cc----tatttaac
i Dasypus_novemcinctus.JH564415.1                        I 2 I 90
s Daubentonia_madagascariensis.ctg71                      12533315 29 -  12879189 A--AATTGACGCA-------------------T-T-Cat----t-cct--tcatttgac
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811652 29 +  35494412 A--AATTGGTGCA-------------------T-T-TGC----t-ctt--tcatttagc
i Delphinapterus_leucas.KZ290073.1                       I 2 C 0
s Desmodus_rotundus.KZ672289.1                             8628334 16 +  20541912 A--AATGGgggca-------------------t-t-tgt--------------------
i Desmodus_rotundus.KZ672289.1                           I 2 I 11
s Dicerorhinus_sumatrensis.PEKH010002091.1                  670156 29 +   1390856 A--AATTGATGCA-------------------T-T-TGC----t-ctt--tcattcaac
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 2 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2911 29 +    198055 A--AATTGGTGCA-------------------T-T-TGC----t-ctt--tccttcaac
i Diceros_bicornis.DicBicMic_scaffold_5955               I 2 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    34897 29 +     67921 A--AATTGATGCA-------------------T-T-TAT----T-CTT--TCATTTAAA
i Dinomys_branickii.DinBra_scaffold_21862                I 3 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 32085 29 -     42551 A--AATCGATGCA-------------------T-T-TAT----T-CTT--TGATTTACT
i Dolichotis_patagonum.DolPat_scaffold_30833             I 3 C 0
s Eidolon_helvum.KE759718.1                                   7840 27 +     11740 A--AATTGGTGCa-------------------t-t-tgt----t-ctt--tcaa--taa
i Eidolon_helvum.KE759718.1                              I 2 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310943 29 +    607251 A--AACTGGTACA-------------------c-t-tgt----t-ctt--tcatttagc
i Elaphurus_davidianus.JRFZ01104969.1                    I 2 C 0
s Enhydra_lutris.KZ291758.1                               16326196 27 -  41312741 C--AATTTGTGCA-------------------A-C-TGc----c-ttt--aaattta--
i Enhydra_lutris.KZ291758.1                              I 2 C 0
s Equus_asinus.JREZ01000139.1                              1280195 29 +   4378816 A--AATTGGTGCA-------------------T-T-Tgc----t-ctt--tcatttaac
i Equus_asinus.JREZ01000139.1                            I 2 C 0
s Equus_caballus.CM000403.2                               18528016 29 -  39960074 A--AATTGGTGCA-------------------T-T-Tgc----t-ctt--tcatttaac
i Equus_caballus.CM000403.2                              I 2 C 0
s Equus_przewalskii.KK951119.1                               30031 29 +    498745 A--AATTGGTGCA-------------------T-T-Tgc----t-ctt--tcatttaac
i Equus_przewalskii.KK951119.1                           I 2 C 0
s Erinaceus_europaeus.JH835339.1                           3326521  6 -   7059049 -----------------------------------------------------ttttgc
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21200607 30 -  21539334 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11328 29 +    133382 A--AATTGGTGCA-------------------T-T-TGC----t-ctt--tcacttagc
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 2 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             25265 29 -     44125 A--AATTGGTGCA-------------------T-T-TGC----t-ctt--tcatttagc
i Eubalaena_japonica.EubJap_flattened_line_31514         I 2 C 0
s Eulemur_albifrons.k141_342033                               9825 29 -     14127 A--AATTGATGCA-------------------T-T-CAT----T-CTT--TCACTTAAC
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                2523 29 -     16928 A--AATTGATGCA-------------------T-T-CAT----T-CTT--TCACTTAAC
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              11556 29 -     25546 A--AATTGATGCA-------------------T-T-CAT----T-CTT--TCACTTAAC
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             8741 29 +     26330 A--AATTGATGCA-------------------T-T-CAT----T-CTT--TCACTTAAC
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                  9998 29 +     23973 A--AATTGATGCA-------------------T-T-CAT----T-CTT--TCACTTAAC
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 8741 29 +     75513 A--AATTGATGCA-------------------T-T-Cat----t-ctt--tcacttaac
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  6693 29 +     97555 A--AATTGATGCA-------------------T-T-Cat----t-ctt--tcacttaac
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                             9619 29 +     26496 G--AATTGATGCA-------------------T-T-Cat----t-ctt--tcatttaac
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                   225 29 -     17153 A--AATTGATGCA-------------------T-T-CAT----T-CTT--TCACTTAAC
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                               9804 29 +    111500 A--AATTGATGCA-------------------T-T-Cat----t-ctt--tcacttaac
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20233850 29 + 206538554 t--aatttgtgca-------------------t-t-ttc----t-ctt--aaaattaat
i Felis_catus.CM001381.2                                 I 2 C 0
s Felis_catus_fca126.CM031415.1                           20192697 29 + 205367284 t--aatttgtgca-------------------t-t-ttc----t-ctt--aaaattaat
i Felis_catus_fca126.CM031415.1                          I 2 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  6210 29 -     36744 T--AATTTGTGCA-------------------T-T-TTC----T-CTT--AAAATTAAT
i Felis_nigripes.FelNig_flattened_line_20823             I 2 C 0
s Galeopterus_variegatus.GalVar_scaffold_266699                 25 29 +      2098 A--AATTGATGCA-------------------T-T-Cat----t-ctt--tcatttaac
i Galeopterus_variegatus.GalVar_scaffold_266699          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     608908 29 -    660261 a--aactgGTACA-------------------c-t-tgt----t-ctt--tcatttagc
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 2 C 0
s Glis_glis.GliGli_scaffold_19807                            30762 29 +     49224 A--AATTAATACA-------------------T-T-TAT----T-CTT--TAATTTAAC
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              11290 30 -     32273 A--AATTGATGCA-------------------T-T-T-CAT--T-TTT--GCATTTAAC
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186333438 30 + 186649187 A--AATTGATGCa-------------------t-t-t-cat--t-ttt--gcatttaaC
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   30484 28 +     78134 A--AATT-ATACA-------------------T-T-TAT----T-CTT--TCATTAAAG
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           2889 29 -     19426 A--AATTGATGCA-------------------T-T-CAT----T-CTT--TCATTTAAC
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              8033 29 -     15286 A--AATTGATGCA-------------------T-T-CAT----T-CTT--TCATTTAAC
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                              9671 29 +     18253 A--AATTGATGCA-------------------T-T-CAT----T-CTT--TCATTTAAC
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                          9774 29 -     41752 A--AATTGATGCA-------------------T-T-Cat----t-ctt--tcatttaac
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                          9607 29 -     16460 A--AATTGATGCA-------------------T-T-Cat----t-ctt--tcatttaac
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238806 29 +    327341 T--AATTTGTGCA-------------------T-T-TTC----T-CTT--AAAATGAAC
i Helogale_parvula.HelPar_flattened_line_2585            I 2 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18112 29 +     36099 A--AACTGGTACA-------------------C-T-TGT----T-CTT--TCATTTAGC
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 2 C 0
s Heterocephalus_glaber.JH602082.1                        20659968 29 +  22651954 A--AATTGatgca-------------------t-t-tat----t-ctt--tcatttaac
i Heterocephalus_glaber.JH602082.1                       I 3 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112465 29 +    128679 A--AATTGGTGCA-------------------T-T-TGC----T-CTT--TCATTCAGC
i Hippopotamus_amphibius.HipAmp_scaffold_9076            I 2 C 0
s Hipposideros_armiger.JXIK01000431.1                       108709 30 +   1711038 A--AATTGGTGTT-------------------TTT-TGt----t-cct--taatttaac
i Hipposideros_armiger.JXIK01000431.1                    I 2 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               40150 30 +     43066 A--AATCAGTGTT-------------------TTT-TGT----T-CCT--TAATTTAAC
i Hipposideros_galeritus.HipGal_scaffold_29171           I 2 C 0
s Hoolock_leuconedys.ctg274                                    430184 28 +    630532 A--AATTGATGCA-------------------T-T-T-C----T-CTT--GCATTTAAC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  41337 29 +     55795 T--AATTTGTGCA-------------------T-T-TTC----T-CTT--AAAATTAGC
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 2 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20461 29 -    143317 A--AATTGATGCA-------------------T-T-TAT----T-CTT--TCATTTAGG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 3 C 0
s Hylobates_agilis.k141_307679                               13116 28 -     15490 A--AATTGATGCA-------------------T-T-T-C----T-CTT--GCATTTAAC
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              55121 28 +     67168 A--AATTGATGCA-------------------T-T-T-C----T-CTT--GCATTTAAC
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189538771 28 - 191637585 A--AATTGATGCA-------------------T-T-T-C----T-CTT--GCATTTAAC
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3331664 28 -  11177569 A--AATTGATGCA-------------------T-T-T-C----T-CTT--GCATTTAAC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      81547 24 +    135385 -------GATGCT-------------------T-T-TAT----T-CTT--TCATTTAAC
i Hystrix_cristata.HysCri_scaffold_5660                  I 2 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7515010 31 -   7955117 agaaattgatgca-------------------t-g-tat----t-ctt--tcatttagc
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   18590 29 +     31101 A--AATTGATGCA-------------------T-T-Cat----t-ctt--tcatttaac
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22869 29 +     23964 A--AATTGGTGCA-------------------T-T-TGC----T-CTT--TCATTTAGC
i Inia_geoffrensis.IniGeo_flattened_line_48101           I 2 C 0
s Jaculus_jaculus.JH725527.1                               8272124 29 -   9596543 A--Aatctttaca-------------------t-t-tat----t-att--tctctGCAT
i Jaculus_jaculus.JH725527.1                             I 367 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                2231 29 -      3359 A--AATTGGTGCA-------------------T-T-TGC----T-CTT--TCATTTAGC
i Kogia_breviceps.KogBre_flattened_line_192630           I 2 C 0
s Lemur_catta.scaffold_24                                 15520133 29 -  30322482 A--AATTGATGCA-------------------T-T-Cat----t-ctt--tcatttaac
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          7045 29 -     23766 A--AATTGATGCA-------------------T-T-Cat----t-ctt--tcatttaac
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             24992 29 +     45836 A--AATTGATGCA-------------------T-T-Cat----t-ctt--tcatttaac
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_582783                           867 29 -      1589 A--AATTGATGCA-------------------T-T-Cat----t-ctt--tcatttaac
i Lepilemur_ruficaudatus.k141_582783                     I 7 I 158
s Lepilemur_septentrionalis.k141_185316                      23047 29 +     54090 A--AATTGATGCA-------------------T-T-Cat----c-ctt--tcatttaac
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3039345 27 +   3914936 C--AATTTGTGCA-------------------A-C-TGc----c-ttt--aaattta--
i Leptonychotes_weddellii.KB714746.1                     I 2 C 0
s Lipotes_vexillifer.KE559953.1                             267921 29 -    662738 A--AATTGGTGCA-------------------T-T-TGC----t-ctt--tcatttagc
i Lipotes_vexillifer.KE559953.1                          I 2 C 0
s Lophocebus_aterrimus.ctg367                              1432538 30 +   1826925 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            1102 19 +     11245 --------------------------------T-T-CAT----TGTTT--TCACTTACC
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999939 19 +   6120653 --------------------------------T-T-CAT----TGTTT--TCACTTACC
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17952134 29 -  59628241 C--AATTTGTGCA-------------------T-T-TGC----T-Ctt--aaatttaat
i Lycaon_pictus.CM007581.1                               I 2 C 0
s Macaca_arctoides.k141_2326796                               2359 30 +     40492 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59671614 30 +  60120075 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  8114 30 -     26193 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75911 30 -    114318 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  1626 30 -     23192 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                11079 30 -     29190 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  19646 30 +     37952 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834734 30 + 187317192 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25453297 30 -  25927173 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  75495 30 +     89720 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 2493 30 +     20474 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   2294 30 -     14993 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  325166 30 -    668171 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                  597 30 -     24072 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               21233 30 -     45290 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87937 26 +     94391 A--AATTGGTGTa-------------------t-t-tgt----t-ctt--tcat--ta-
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 2 C 0
s Mandrillus_leucophaeus.scaffold280                      23932782 30 -  24302211 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346959 30 +    752769 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              16018 29 +    737560 A--AATGAGTATA-------------------T-T-TGC----T-Ctt--acatttaat
i Manis_javanica.JSZB01003497.1                          I 2 C 0
s Manis_pentadactyla.KN006162.1                              47407 29 -    317179 A--AATTAGTACA-------------------T-T-TGC----T-Ctt--acatttaat
i Manis_pentadactyla.KN006162.1                          I 2 C 0
s Marmota_marmota.CZRN01000018.1                          33097860 31 -  40650429 agaaattgatgca-------------------t-g-tat----t-ctt--tcatttagc
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         7216 29 -    207569 C--AATTGGTGCA-------------------T-T-TCT----T-CTT--TAATTTTAC
i Megaderma_lyra.MegLyr_scaffold_4542                    I 2 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6909 27 +     13704 C--AATTTGTGCA-------------------A-C-TGC----C-TTT--AAATTTA--
i Mellivora_capensis.MelCap_flattened_line_69365         I 2 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3537 29 +     10310 A--AATTGGTGCA-------------------T-T-TGC----T-CTT--TCATTTAGC
i Mesoplodon_bidens.MesBid_scaffold_108144               I 2 C 0
s Microcebus_murinus.CM007674.1                           18287529 29 -  93316391 A--AATGgatgca-------------------t-t-cat----t-ctt--tcattcaac
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13845 29 -     19307 A--AATGGGTGCA-------------------T-G-TGT----T-CTT--TTATTTAAC
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 2 C 0
s Miopithecus_ogouensis.k141_534055                           4532 30 -     28506 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         2181 27 -      8324 C--AATTTGTGCA-------------------A-C-TGC----C-TTT--AAATTTA--
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 2 C 0
s Mirza_zaza.k141_952172                                      5097 29 -     37649 A--AATGGAGGCA-------------------T-T-Cat----t-ctt--tcattcaac
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    27042 29 -    437263 A--AATTGGTGCA-------------------T-T-TGC----T-CTT--TCATTTAGC
i Monodon_monoceros.MonMon_M_scaffold_103                I 2 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138248 29 -    366855 A--AATTGGTGCA-------------------T-T-CGt----t-ctt--tcatttaac
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 2 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                    994 29 +     82753 A--AACTGGTACA-------------------C-T-TGT----T-CTT--TCATTTAGC
i Moschus_moschiferus.MosMos_scaffold_13123              I 2 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   32037 30 +     37127 T--AATTTGTGCA-------------------T-TTTTC----T-CTT--AAAATTAAC
i Mungos_mungo.MunMun_flattened_line_23663               I 2 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2755 29 +     14296 A--AAATGATGCA-------------------T-T-TAT----T-CTT--TCATTTAAC
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               298094 27 -  14710649 C--AATCTGTGCA-------------------A-C-Tgc----c-ttt--aaattta--
i Mustela_putorius.JH418006.1                            I 2 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186534 30 +    196477 A--AATTGATACA-------------------C-T-CAC----T-CTT-ATTATTTAAC
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 2 C 0
s Nasalis_larvatus.k141_413338                               10532 30 +     21681 A--AATTGATGTA-------------------T-T-T-C--ATT-CTT--GCATTTCAC
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5865998 29 +   7148211 A--AATTGGTGCA-------------------T-T-TGC----t-ctt--tcatttagc
i Neophocaena_asiaeorientalis.KZ687982.1                 I 2 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756801 29 +    783361 G--AATTGCTGCA-------------------T-T-TGT----G-CTt--tcatttaac
i Noctilio_leporinus.NocLep_scaffold_251                 I 2 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146395 29 -   9404916 C--AATTTGTGCA-------------------T-T-TGC----T-Ctt--aaatttaat
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 2 C 0
s Nycticebus_bengalensis.LG01                            102574909 30 - 196305487 A--AATTGACATG-------------------T-T-CAT----TGTTT--TCACTTACC
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2595 30 +      8486 A--AATTGACATG-------------------T-T-CAT----TGTTT--TCACTTACC
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105745336 30 + 199412804 A--AATTGATATG-------------------T-T-CAT----TGTTT--TCACTTACC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1359065 14 +   3988456 --------------------------------------T----T-CCT--TCATTTAAC
i Ochotona_princeps.JH802162.1                           I 13 C 0
s Odobenus_rosmarus.KB229312.1                              503487 27 -   2017862 C--AATTTGTGCA-------------------A-C-TGc----c-ttt--aaattta--
i Odobenus_rosmarus.KB229312.1                           I 2 C 0
s Odocoileus_virginianus.KZ100018.1                         145314 29 +    630418 A--AACTGGTACA-------------------c-t-tgt----t-ctt--tcatttagc
i Odocoileus_virginianus.KZ100018.1                      I 2 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          76825 29 -    150152 A--AACTGGTACA-------------------c-t-tgt----t-ctt--tcatttagc
i Okapia_johnstoni.LVCL01S0005463.1                      I 2 C 0
s Orcinus_orca.KB316932.1                                  2781913 29 -  10937097 A--AATTGGTGCA-------------------T-T-TGC----t-ctt--tcatttagc
i Orcinus_orca.KB316932.1                                I 2 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       459148 29 -    559221 C--AATTTGTGCA-------------------T-T-TGC----T-Ctt--aaatttaat
i Otocyon_megalotis.JAEUCK010005147.1                    I 2 C 0
s Ovis_aries.CM001607.2                                   17586087 29 +  44047080 A--AACTGGTACA-------------------c-t-tgt----t-ctt--tcatttagc
i Ovis_aries.CM001607.2                                  I 2 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      174064 29 -    191736 A--AACTGGTACA-------------------C-T-TGT----T-CTT--TCATTTAGC
i Ovis_canadensis.OviCan_scaffold_2572                   I 2 C 0
s Pan_paniscus.KQ411613.1                                    39407  5 +     80009 A--AATT----------------------------------------------------
i Pan_paniscus.KQ411613.1                                C 0 I 33
s Pan_troglodytes.CM009242.2                             189138305 25 + 189151597 -------GATGca-------------------t-t-t-cat--t-ttt--gcatttaaC
i Pan_troglodytes.CM009242.2                             I 192 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  147864 29 +    230217 T--AATTTGTGCA-------------------T-T-TTC----T-CTT--AAAATTAAT
i Panthera_onca.PanOnc_flattened_line_3271               I 2 C 0
s Panthera_pardus.KV860321.1                                261071 29 +  18783137 t--aatttgtgca-------------------t-t-ttc----t-ctt--aaaattaat
i Panthera_pardus.KV860321.1                             I 2 C 0
s Panthera_tigris.KE722367.1                               4717708 29 -   8748460 t--aatttgtgca-------------------t-t-ttc----t-ctt--aaaattaat
i Panthera_tigris.KE722367.1                             I 2 C 0
s Pantholops_hodgsonii.KE114653.1                          1264981 29 -   2937107 A--AACTGGTACA-------------------c-t-tgt----t-ctt--tcatttagc
i Pantholops_hodgsonii.KE114653.1                        I 2 C 0
s Papio_anubis.CM001495.2                                183438567 30 + 183742232 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             2260 30 +     20448 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20559065 30 +  20919399 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   1003 30 +     41871 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     4289 30 +     27711 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  4374 30 +      9205 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9523 29 -     78924 T--AATTTGTGCA-------------------T-T-TTC----T-CTT--AAAATTAAC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 2 C 0
s Perodicticus_ibeanus.k141_855320                            5084 29 +     13100 A--AATTGATGTG-------------------T-T-CAT----T-CTT--TCACTTACC
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             3457 29 +     25941 A--AATTGATGTG-------------------T-T-CAT----T-CTT--TCACTTACC
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     26729 29 -     29689 A--AATGGATGCA-------------------T-T-TAT----T-CTT--TCATTTAAC
i Petromus_typicus.PetTyp_scaffold_42190                 I 3 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               8960 29 +     63832 A--AATTGGTGCA-------------------T-T-TGC----t-ctt--tcatttagc
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 2 C 0
s Piliocolobus_badius.k141_1234363                           39044 30 +     62158 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTCAC
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33766 30 +     89929 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTCAC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            35182 30 +     51399 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTCAC
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14291418 30 -  14605196 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTCAC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34666 29 +     35617 A--AATTGGTGCA-------------------T-T-TGC----T-CTT--TCATTTAGC
i Platanista_gangetica.PlaMin_flattened_line_32310       I 2 C 0
s Pongo_abelii.CM009266.2                                189126495 28 + 189387572 A--AATTGATGCA-------------------T-T-T-C----T-CTT--GCATTTTAC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9566101 28 +   9816681 A--AATTGATGTA-------------------T-T-T-C----T-CTT--GCATTTTAC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68693 30 -     81375 A--AATTGATGTA-------------------T-T-T-C--ATT-CTT--GCATTTCAC
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                               514 30 +     19060 A--AATTGATGTA-------------------T-T-T-C--ATT-CTT--GCATTTCAC
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2592786 29 -   4620579 A--AATTgatgca-------------------t-t-cat----t-ctt--tcatttaac
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986799 29 +   2598838 A--AATTGATgca-------------------c-t-cat----t-ctt--tcatttaac
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          25088 29 +     38485 A--AATTGATGCA-------------------C-T-CAT----T-CTT--TCATTTAAC
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             1247 29 +      4256 A--AATTGATGCA-------------------T-T-CAT----T-CTT--TCATTTAAC
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22607 29 +     35766 A--AATTGATGCa-------------------t-t-cat----t-ctt--tcatttaac
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            790 29 -     24134 A--AATTGATGCA-------------------T-T-CAT----T-CTT--TCATTTAAC
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24602 29 -     67325 A--AATTGATGCa-------------------t-t-cat----t-ctt--tcatttaac
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            847 29 -      6182 A--AATTGATGCA-------------------C-T-CAT----T-CTT--TCATTTAAC
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11642 29 -     21811 A--AATTGGtgca-------------------t-t-tgt----t-ctt--tcatttaat
i Pteronotus_parnellii.KE909381.1                        I 2 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         37105 27 +     42204 C--AATTTGTGCA-------------------A-C-TGC----C-TTT--AAATTTA--
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 2 C 0
s Pteropus_alecto.KB030862.1                              22974108 27 +  28871421 A--AATTGAtgca-------------------t-t-tgt----t-ctt--tcat--taa
i Pteropus_alecto.KB030862.1                             I 2 C 0
s Pteropus_vampyrus.KN534172.1                                2046 27 -      8028 A--AATTGGTgca-------------------t-t-tgt----t-ctt--tcat--taa
i Pteropus_vampyrus.KN534172.1                           I 2 C 0
s Puma_concolor.QAVW01001104.1                            20270995 29 -  38429054 t--aatttgtgca-------------------t-t-ttc----t-ctt--aaaattaat
i Puma_concolor.QAVW01001104.1                           I 2 C 0
s Pygathrix_cinerea.k141_1153803                             10525 30 -     91421 A--AATTGATGTA-------------------T-T-T-C--ATT-CTT--GCATTTCAC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7604653 30 +   7812017 A--AATTGATGTA-------------------T-T-T-C--ATT-CTT--GCATTTCAC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10494 30 -     72585 A--AATTGATGTA-------------------T-T-T-C--ATT-CTT--GCATTTCAC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5562 29 +     55207 A--AACTGGTACA-------------------C-T-TGT----T-CTT--TCATTTGGC
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 2 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        367256 29 -   3329780 A--AATCGGtgct-------------------t-t-tgt----t-ctt--taatttaac
i Rhinolophus_sinicus.LVEH01000134.1                     I 2 C 0
s Rhinopithecus_bieti.k119_217274                             2209 30 -     11128 A--AATTGATGTA-------------------T-T-T-C--ATT-CTT--GCATTTCAC
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91231564 30 - 195417433 A--AATTGATGTA-------------------T-T-T-C--ATT-CTT--GCATTTCAC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7667213 30 +   7961872 A--AATTGATGTA-------------------T-T-T-C--ATT-CTT--GCATTTCAC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85093 26 -     96226 A--AATTGGTGCa-------------------t-t-tgt----t-ctt--tcat--ta-
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 2 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151796 28 -    313613 A---ATTGGTGCC-------------------t-t-tgt----t-tat--tcaattaac
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 2 C 0
s Semnopithecus_entellus.k141_11662                          15037 30 -     19888 A--AATTGATGTA-------------------T-T-T-C--ATT-CTT--GCATTTCAC
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      22239 30 +     39453 A--AATTGATGTA-------------------T-T-T-C--ATT-CTT--GCATTTCAC
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2765 30 +     27826 A--AATTGATGTA-------------------T-T-T-C--ATT-CTT--GCATTTCAC
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             2286 30 -     19483 A--AATTGATGTA-------------------T-T-T-C--ATT-CTT--GCATTTCAC
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      2348 30 +      7198 A--AATTGATGTA-------------------T-T-T-C--ATT-CTT--GCATTTCAC
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         10608 30 +     15514 A--AATTGATGTA-------------------T-T-T-C--ATT-CTT--GCATTTCAC
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            188097 29 -    191337 A--AATTGGTGCA-------------------T-T-TGC----T-CTT--CCATTTAGC
i Solenodon_paradoxus.SolPar_flattened_line_5840         I 2 C 0
s Sorex_araneus.JH798187.1                                13648265 48 -  18376816 A--AATTGGTGTCTTCcacttatcacttgctct-t-tgc----t-ctt--tcatttatc
i Sorex_araneus.JH798187.1                               I 2 C 0
s Spermophilus_dauricus.KZ294078.1                         1948648 12 -   3870691 agaaattgatgc-----------------------------------------------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 14
s Spilogale_gracilis.SpiGra_flattened_line_13525             27641 27 +     97271 T--AATTTGTGCA-------------------A-T-TGC----C-TTT--AAATTTA--
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 2 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14945 29 -    196729 T--GATTTGTGCA-------------------T-T-TTC----T-CTT--AAAATTAAC
i Suricata_suricatta.SurSur_flattened_line_6629          I 2 C 0
s Sus_scrofa.JH118708.1                                      32164 29 -     47482 A--AGTTGGtaca-------------------t-t-tgc----t-ttt--tcatttagc
i Sus_scrofa.JH118708.1                                  I 2 I 6
s Symphalangus_syndactylus.tarseq_199                      1088815 28 -   1523678 A--AATTGATGCA-------------------T-T-T-C----T-CTT--GCATTTAAC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 7247 29 +     41958 A--AATTGGTGCA-------------------T-T-TGT----T-CTT--TCATTTAAC
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 2 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69888 30 +    116680 A--AATTGATACA-------------------C-T-CAC----T-CTT-CTTATTGAAA
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 2 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115638 29 -    156842 A--AATTGGTGCA-------------------T-G-TTC----t-ctt--tcatttaac
i Tapirus_indicus.TapInd_scaffold_9301                   I 2 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    384089 29 +    539355 A--AATTGGTGCA-------------------T-G-TGC----t-ctt--tcatttaac
i Tapirus_terrestris.TapTer_scaffold_755                 I 2 C 0
s Tarsius_lariang.k141_2201908                               11094  8 +     70052 ---------------------------------------------------catttaac
i Tarsius_lariang.k141_2201908                           I 9 C 0
s Tarsius_wallacei.k141_780063                               15399  8 +     25099 ---------------------------------------------------CATTTAAC
i Tarsius_wallacei.k141_780063                           I 9 C 0
s Theropithecus_gelada.CM009954.1                        186423611 30 + 186847797 A--AATTGATGCA-------------------T-T-T-C--ATT-CTT--GCATTTAAC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103867 14 +    114563 --------------------------------------T----T-CTT--TCATTTAAC
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 6 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   2264 18 +      8208 C--AAGTGGTACA-------------------T-T-CAC----T-C-------------
i Tolypeutes_matacus.TolMat_scaffold_228639              I 2 I 198
s Tonatia_saurophila.TonSau_scaffold_294                     79390 29 +    610378 A--AATGGGTACA-------------------T-T-TGt----t-ctt--tcatttaac
i Tonatia_saurophila.TonSau_scaffold_294                 I 2 C 0
s Trachypithecus_auratus.k141_722599                          6339 30 -     20410 A--AATTGATGTA-------------------T-T-T-C--ATT-CTT--GCATTTCAC
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    10535 30 +     15221 A--AATTGATGTA-------------------T-T-T-C--ATT-CTT--GCATTTCAC
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        6440 30 +     19930 A--AATTGATGTA-------------------T-T-T-C--ATT-CTT--GCATTTCAC
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2870 30 -     19997 A--AATTGATGTA-------------------T-T-T-C--ATT-CTT--GCATTTCAC
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            42989 30 -     60166 A--AATTGATGTA-------------------T-T-T-C--ATT-CTT--GCATTTCAC
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        10462 30 -     27529 A--AATTGATGTA-------------------T-T-T-C--ATT-CTT--GCATTTCAC
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     10402 30 -     18194 A--AATTGATGTA-------------------T-T-T-C--ATT-CTT--GCATTTCAC
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           4137 30 -     21137 A--AATTGATGTA-------------------T-T-T-C--ATT-CTT--GCATTTCAC
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2840 30 -     10723 A--AATTGATGTA-------------------T-T-T-C--ATT-CTT--GCATTTCAC
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         1992 30 +      9834 A--AATTGATGTA-------------------T-T-T-C--ATT-CTT--GCATTTCAC
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        20310 30 +     32220 A--AATTGATGTA-------------------T-T-T-C--ATT-CTT--GCATTTCAC
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5934407 30 +   6242583 A--AATTGATGTA-------------------T-T-T-C--ATT-CTT--GCATTTCAC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        3654 30 +     20839 A--AATTGATGTA-------------------T-T-T-C--ATT-CTT--GCATTTCAC
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                   1220 29 -      1748 A--AATTGGTACA-------------------C-T-TGT----T-CTT--TTATTTAGC
i Tragulus_javanicus.TraJav_scaffold_140459              I 2 C 0
s Tupaia_chinensis.KB320699.1                              2150833 29 +   4065304 A--AATTGatgca-------------------t-t-cat----t-ctt--tcatttaac
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     4131 29 -     10553 A--AATTGATGCG-------------------T-T-CAT----T-CTT--TCATTTAAC
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15738160 29 +  33153633 A--AATTGGTGCA-------------------T-T-TGC----t-ctt--tcatttagc
i Tursiops_truncatus.MRVK01000835.1                      I 2 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   51982 28 -     77625 A---ACTGGTACC-------------------t-t-tat----t-tat--tcaattaac
i Uropsilus_gracilis.UroGra_scaffold_12083               I 2 C 0
s Ursus_maritimus.KK499267.1                               4847349 27 -   5085361 C--AATTTGTGCA-------------------A-C-TGc----c-ttt--aaattta--
i Ursus_maritimus.KK499267.1                             I 2 C 0
s Varecia_rubra.k141_590885                                   7474 29 +     50397 A--AATTGATGCA-------------------T-T-CAT----T-CTT--TCATTTAGC
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              7522 29 +     24756 A--AATTGATGCA-------------------T-T-CAT----T-CTT--TCATTTAGC
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368817 29 -   5488506 a--aatgggtgca-------------------t-t-ttc----t-ttc--acatttagc
i Vicugna_pacos.KN270157.1                               I 2 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7809 29 -     43706 C--AATTTGTGCA-------------------T-T-TGC----T-CTT--AAATTTAAT
i Vulpes_lagopus.VulLag_flattened_line_30954             I 2 C 0
s Xerus_inauris.XerIna_scaffold_48378                        20150 31 -     24430 AGAAATTGATGCA-------------------T-G-TAT----T-CTT--TAATTTAAC
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          2058 27 +     86975 C--AATTTGTTCA-------------------A-C-TGC----C-TTT--AAATTTA--
i Zalophus_californianus.ZalCal_flattened_line_17732     I 2 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      11131 29 +     63895 A--AATTGTTACA-------------------T-T-TAT----T-CTT--TCACTTCAT
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 262 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11852 29 +     12536 A--AATTGGTGCA-------------------T-T-TGC----T-CTT--TCATTTAGC
i Ziphius_cavirostris.ZipCav_flattened_line_71469        I 2 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.KL204047.1                            2026055 841 -   3037898 T
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Galagoides_demidoff.k141_31856                              3217  0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Castor_canadensis.CasCan_scaffold_2074                    134056 205 +    179628 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       2085 3 +     62944 AC--A
s Acinonyx_jubatus.LLWD01001279.1                           824019 5 -   1699592 ataca
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 3
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507461 3 -  29979442 ac--a
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 3
s Ailurus_fulgens.LNAC01001112.1                             76036 3 -    347723 at--g
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 3
s Allactaga_bullata.AllBul_scaffold_9566                     65778 3 -     89534 AT--G
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 4
s Allenopithecus_nigroviridis.k141_3361533                   10064 3 -     52922 AC--A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9995 3 -     28001 AC--A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                           441 3 -     18505 AC--A
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           1290 3 -     12518 AC--A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675819 3 -   2318259 at--g
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 3
s Anoura_caudifer.AnoCau_scaffold_1412                      183557 3 +    412891 at--a
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 3
s Antilocapra_americana.AntAmePen_scaffold_12469             98301 3 -    100397 AC--A
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 I 3
s Aplodontia_rufa.AprRuf_scaffold_68852                       7703 3 +     20879 AT--G
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 4
s Arctocebus_calabarensis.k141_288239                        14877 3 +     17124 AT--A
i Arctocebus_calabarensis.k141_288239                    C 0 I 4
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2914 3 +     43469 AT--A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 3
s Avahi_laniger.k141_765380                                  49757 3 -     92717 ac--a
i Avahi_laniger.k141_765380                              C 0 I 4
s Avahi_peyrierasi.k141_1424874                              50382 3 +     85213 ac--a
i Avahi_peyrierasi.k141_1424874                          C 0 I 4
s Balaenoptera_acutorostrata.KI537508.1                   15192046 3 +  23207421 ac--a
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 3
s Balaenoptera_bonaerensis.DF707048.1                         2511 3 -     18090 ac--a
i Balaenoptera_bonaerensis.DF707048.1                    C 0 I 3
s Beatragus_hunteri.BeaHun_scaffold_50177                    26741 3 +     34529 AC--G
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 3
s Bison_bison.KN261452.1                                    199798 3 -    288883 aC--A
i Bison_bison.KN261452.1                                 C 0 I 3
s Bos_indicus.CM003047.1                                  20273003 3 +  48749331 aC--A
i Bos_indicus.CM003047.1                                 C 0 I 3
s Bos_mutus.JH880303.1                                     1125559 3 -   1948126 aC--A
i Bos_mutus.JH880303.1                                   C 0 I 3
s Bos_taurus.CM000203.6                                   18083641 3 +  45695690 aC--A
i Bos_taurus.CM000203.6                                  C 0 I 3
s Bubalus_bubalis.KI419123.1                               2819308 3 +   4408762 aC--A
i Bubalus_bubalis.KI419123.1                             C 0 I 3
s Camelus_bactrianus.KN276810.1                            9999355 3 -  17673402 ac--a
i Camelus_bactrianus.KN276810.1                          C 0 I 3
s Camelus_dromedarius.KN272107.1                           2331819 3 -   7040546 ac--a
i Camelus_dromedarius.KN272107.1                         C 0 I 3
s Camelus_ferus.KB017975.1                                  400095 3 -   1652518 ac--a
i Camelus_ferus.KB017975.1                               C 0 I 3
s CanFam4.chr16                                           17796215 3 -  60362399 AC--A
i CanFam4.chr16                                          C 0 I 3
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182272 3 -    185531 AC--A
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 I 3
s Canis_lupus_dingo.QKWQ01000480.1                         9031658 3 -   9314153 ac--a
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 3
s Canis_lupus_familiaris.chr16                            17955923 3 -  59632846 ac--a
i Canis_lupus_familiaris.chr16                           C 0 I 3
s Canis_lupus_orion.HG994398.1                            18497223 3 +  63665305 ac--a
i Canis_lupus_orion.HG994398.1                           C 0 I 3
s Capra_aegagrus.CM003241.1                               18829937 3 +  46296322 aC--G
i Capra_aegagrus.CM003241.1                              C 0 I 3
s Capra_hircus.CM004588.1                                 18060657 3 -  44709034 aA--G
i Capra_hircus.CM004588.1                                C 0 I 3
s Carlito_syrichta.NW_007259797.1                           141489 3 -    496798 ac--a
i Carlito_syrichta.NW_007259797.1                        C 0 I 8
s Carollia_perspicillata.CarPer_scaffold_92756                3331 3 -     11696 at--a
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 3
s Castor_canadensis.CasCan_scaffold_2074                    134261 2 +    179628 -T--A
i Castor_canadensis.CasCan_scaffold_2074                 I 205 I 4
s Catagonus_wagneri.CatWag_scaffold_2839                     89700 3 +    217609 ac--a
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 3
s Cavia_aperea.AVPZ01000300.1                             18348104 3 -  23392119 aC--A
i Cavia_aperea.AVPZ01000300.1                            C 0 I 4
s Cavia_porcellus.DS562891.1                              18360364 3 -  23407841 aC--A
i Cavia_porcellus.DS562891.1                             C 0 I 4
s Cavia_tschudii.CavTsc_scaffold_8919                        99238 3 +    143979 AC--A
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 I 4
s Cephalopachus_bancanus.k141_2037105                         5404 3 -      8605 AC--A
i Cephalopachus_bancanus.k141_2037105                    C 0 I 8
s Ceratotherium_simum.JH767749.1                          12228332 3 +  27778364 ac--a
i Ceratotherium_simum.JH767749.1                         C 0 I 3
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          3050 3 -      3715 AC--A
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 I 3
s Cercocebus_atys.KQ010504.1                               4471024 3 +   4669795 AC--A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         9573 3 -     19203 AC--A
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3994 3 +      8260 AC--A
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           4222 3 +     27781 AC--A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         4380 3 -     20310 AC--A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           7364 3 +     29689 AC--A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            1802 3 +      9989 AC--A
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          10048 3 -     27936 AC--A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                            10074 3 -     11289 AC--A
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38812446 3 +  39242232 AC--A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21218145 3 -  21565898 AC--A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       35264 3 -     53127 AC--A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        2549 3 +      7159 AC--A
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       10067 3 -     27947 AC--A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         10043 3 +     17596 AC--A
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         40543 3 -     41420 AC--A
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            5320 3 -      6351 gc--a
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       I 88 I 3
s Cheirogaleus_major.k141_333249                             17173 3 -     52598 ac--a
i Cheirogaleus_major.k141_333249                         C 0 I 4
s Cheirogaleus_medius.k141_1055463                           12523 3 +     57038 ac--a
i Cheirogaleus_medius.k141_1055463                       C 0 I 4
s Chinchilla_lanigera.JH722012.1                           1251441 3 +   2543920 ac--a
i Chinchilla_lanigera.JH722012.1                         C 0 I 4
s Chlorocebus_aethiops.ctg25                              18424006 3 -  18827391 AC--A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       10447 3 -     50209 AC--A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135417455 3 + 135778131 AC--A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15613 3 +     19366 AC--A
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 I 3
s Choloepus_hoffmanni.KN194906.1                            170712 3 +    839153 ac--a
i Choloepus_hoffmanni.KN194906.1                         C 0 I 3
s Colobus_angolensis.KN981557.1                            1905962 3 +   2368649 AC--A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199945631 3 + 200372422 AC--A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              32503 3 +     84244 AC--A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17546771 3 -  53390261 at--t
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10964 3 -     20389 GT--A
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 5
s Crocidura_indochinensis.CroInd_scaffold_287352               954 3 +      4208 AC--T
i Crocidura_indochinensis.CroInd_scaffold_287352         C 0 I 2
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24912 5 -     87169 ATACA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 3
s Cuniculus_paca.CunPac_flattened_line_231100                 3513 3 +      5455 AC--A
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 I 4
s Dasyprocta_punctata.DasPun_flattened_line_206793            1866 3 +      3576 AT--G
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 I 4
s Dasypus_novemcinctus.JH564415.1                            61590 3 +   2246927 ac--a
i Dasypus_novemcinctus.JH564415.1                        I 90 I 3
s Daubentonia_madagascariensis.ctg71                      12533344 3 -  12879189 ac--a
i Daubentonia_madagascariensis.ctg71                     C 0 I 4
s Delphinapterus_leucas.KZ290073.1                        16811681 3 +  35494412 ac--a
i Delphinapterus_leucas.KZ290073.1                       C 0 I 3
s Desmodus_rotundus.KZ672289.1                             8628361 3 +  20541912 at--a
i Desmodus_rotundus.KZ672289.1                           I 11 I 3
s Dicerorhinus_sumatrensis.PEKH010002091.1                  670185 3 +   1390856 ac--a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 3
s Diceros_bicornis.DicBicMic_scaffold_5955                    2940 3 +    198055 ac--a
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 3
s Dinomys_branickii.DinBra_scaffold_21862                    34926 3 +     67921 AC--A
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 105
s Dolichotis_patagonum.DolPat_scaffold_30833                 32114 3 -     42551 AC--A
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 I 4
s Eidolon_helvum.KE759718.1                                   7867 3 +     11740 ac--a
i Eidolon_helvum.KE759718.1                              C 0 I 3
s Elaphurus_davidianus.JRFZ01104969.1                       310972 3 +    607251 aC--A
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 3
s Enhydra_lutris.KZ291758.1                               16326223 3 -  41312741 ac--a
i Enhydra_lutris.KZ291758.1                              C 0 I 3
s Equus_asinus.JREZ01000139.1                              1280224 3 +   4378816 at--a
i Equus_asinus.JREZ01000139.1                            C 0 I 3
s Equus_caballus.CM000403.2                               18528045 3 -  39960074 at--a
i Equus_caballus.CM000403.2                              C 0 I 3
s Equus_przewalskii.KK951119.1                               30060 3 +    498745 at--a
i Equus_przewalskii.KK951119.1                           C 0 I 3
s Erinaceus_europaeus.JH835339.1                           3326527 3 -   7059049 ac--t
i Erinaceus_europaeus.JH835339.1                         C 0 I 3
s Erythrocebus_patas.Contig38                             21200637 3 -  21539334 AC--A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11357 3 +    133382 ac--a
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 3
s Eubalaena_japonica.EubJap_flattened_line_31514             25294 3 -     44125 ac--a
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 I 3
s Eulemur_albifrons.k141_342033                               9854 3 -     14127 AC--A
i Eulemur_albifrons.k141_342033                          C 0 I 4
s Eulemur_collaris.k141_377015                                2552 3 -     16928 AC--A
i Eulemur_collaris.k141_377015                           C 0 I 4
s Eulemur_coronatus.k141_885031                              11585 3 -     25546 AC--A
i Eulemur_coronatus.k141_885031                          C 0 I 4
s Eulemur_flavifrons.k141_1184614                             8770 3 +     26330 AC--A
i Eulemur_flavifrons.k141_1184614                        C 0 I 4
s Eulemur_fulvus.k141_544389                                 10027 3 +     23973 AC--A
i Eulemur_fulvus.k141_544389                             C 0 I 4
s Eulemur_macaco.k141_1562045                                 8770 3 +     75513 ac--a
i Eulemur_macaco.k141_1562045                            C 0 I 4
s Eulemur_mongoz.k141_232305                                  6722 3 +     97555 ac--a
i Eulemur_mongoz.k141_232305                             C 0 I 4
s Eulemur_rubriventer.k141_571033                             9648 3 +     26496 ac--a
i Eulemur_rubriventer.k141_571033                        C 0 I 4
s Eulemur_rufus.k141_1476633                                   254 3 -     17153 AC--A
i Eulemur_rufus.k141_1476633                             C 0 I 4
s Eulemur_sanfordi.k141_1122526                               9833 3 +    111500 ac--a
i Eulemur_sanfordi.k141_1122526                          C 0 I 4
s Felis_catus.CM001381.2                                  20233879 5 + 206538554 ataca
i Felis_catus.CM001381.2                                 C 0 I 3
s Felis_catus_fca126.CM031415.1                           20192726 5 + 205367284 ataca
i Felis_catus_fca126.CM031415.1                          C 0 I 3
s Felis_nigripes.FelNig_flattened_line_20823                  6239 5 -     36744 ATACA
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 3
s Galeopterus_variegatus.GalVar_scaffold_266699                 54 3 +      2098 ac--a
i Galeopterus_variegatus.GalVar_scaffold_266699          C 0 I 4
s Giraffa_tippelskirchi.LVKQ01S007888.1                     608937 3 -    660261 aC--A
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 I 3
s Glis_glis.GliGli_scaffold_19807                            30791 3 +     49224 AT--G
i Glis_glis.GliGli_scaffold_19807                        C 0 I 4
s Gorilla_beringei.k141_3596273                              11320 3 -     32273 AC--A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186333468 3 + 186649187 AC--A
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   30512 3 +     78134 AT--G
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 4
s Hapalemur_alaotrensis.k141_170648                           2918 3 -     19426 AC--A
i Hapalemur_alaotrensis.k141_170648                      C 0 I 4
s Hapalemur_gilberti.k141_488810                              8062 3 -     15286 AC--A
i Hapalemur_gilberti.k141_488810                         C 0 I 4
s Hapalemur_griseus.k141_1511508                              9700 3 +     18253 AC--A
i Hapalemur_griseus.k141_1511508                         C 0 I 4
s Hapalemur_meridionalis.k141_248335                          9803 3 -     41752 ac--a
i Hapalemur_meridionalis.k141_248335                     C 0 I 4
s Hapalemur_occidentalis.k141_907772                          9636 3 -     16460 ac--a
i Hapalemur_occidentalis.k141_907772                     C 0 I 4
s Helogale_parvula.HelPar_flattened_line_2585               238835 5 +    327341 ATACA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 3
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18141 3 +     36099 AC--G
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 I 3
s Heterocephalus_glaber.JH602082.1                        20659997 3 +  22651954 ac--a
i Heterocephalus_glaber.JH602082.1                       C 0 I 4
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112494 3 +    128679 AC--G
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 I 3
s Hipposideros_armiger.JXIK01000431.1                       108739 3 +   1711038 ac--a
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 6
s Hipposideros_galeritus.HipGal_scaffold_29171               40180 3 +     43066 AC--A
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 I 6
s Hoolock_leuconedys.ctg274                                    430212 3 +    630532 AC--A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  41366 5 +     55795 ATACA
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 3
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20490 3 -    143317 AC--A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 4
s Hylobates_agilis.k141_307679                               13144 3 -     15490 AC--A
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              55149 3 +     67168 AC--A
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189538799 3 - 191637585 AC--A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3331692 3 -  11177569 AC--A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      81571 3 +    135385 AC--A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 5
s Ictidomys_tridecemlineatus.JH393364.1                    7515041 3 -   7955117 at--a
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 3
s Indri_indri.k141_3655594                                   18619 3 +     31101 ac--a
i Indri_indri.k141_3655594                               C 0 I 4
s Inia_geoffrensis.IniGeo_flattened_line_48101               22898 3 +     23964 AC--A
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 I 3
s Kogia_breviceps.KogBre_flattened_line_192630                2260 3 -      3359 AC--A
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 I 3
s Lemur_catta.scaffold_24                                 15520162 3 -  30322482 ac--a
i Lemur_catta.scaffold_24                                C 0 I 4
s Lepilemur_ankaranensis.k141_596936                          7074 3 -     23766 ac--a
i Lepilemur_ankaranensis.k141_596936                     C 0 I 4
s Lepilemur_dorsalis.k141_577674                             25021 3 +     45836 ac--a
i Lepilemur_dorsalis.k141_577674                         C 0 I 4
s Lepilemur_ruficaudatus.k141_420445                         31933 3 -     32627 ac--a
i Lepilemur_ruficaudatus.k141_420445                     I 29 I 4
s Lepilemur_septentrionalis.k141_185316                      23076 3 +     54090 ac--a
i Lepilemur_septentrionalis.k141_185316                  C 0 I 4
s Leptonychotes_weddellii.KB714746.1                       3039372 3 +   3914936 ac--a
i Leptonychotes_weddellii.KB714746.1                     C 0 I 4
s Lipotes_vexillifer.KE559953.1                             267950 3 -    662738 ac--a
i Lipotes_vexillifer.KE559953.1                          C 0 I 3
s Lophocebus_aterrimus.ctg367                              1432568 3 +   1826925 AC--A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            1121 3 +     11245 AC--A
i Loris_lydekkerianus.k141_2539221                       C 0 I 4
s Loris_tardigradus.ctg83                                   999958 3 +   6120653 AC--A
i Loris_tardigradus.ctg83                                C 0 I 4
s Lycaon_pictus.CM007581.1                                17952163 3 -  59628241 ac--a
i Lycaon_pictus.CM007581.1                               C 0 I 3
s Macaca_arctoides.k141_2326796                               2389 3 +     40492 AC--A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59671644 3 +  60120075 AC--A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  8144 3 -     26193 AC--A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75941 3 -    114318 AC--A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  1656 3 -     23192 AC--A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                11109 3 -     29190 AC--A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  19676 3 +     37952 AC--A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834764 3 + 187317192 AC--A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25453327 3 -  25927173 AC--A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  75525 3 +     89720 AC--A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 2523 3 +     20474 AC--A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   2324 3 -     14993 AC--A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  325196 3 -    668171 AC--A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                  627 3 -     24072 AC--A
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               21263 3 -     45290 AC--A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87963 3 +     94391 ac--a
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 5
s Mandrillus_leucophaeus.scaffold280                      23932812 3 -  24302211 AC--A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346989 3 +    752769 AC--A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              16047 3 +    737560 ac--a
i Manis_javanica.JSZB01003497.1                          C 0 I 3
s Manis_pentadactyla.KN006162.1                              47436 3 -    317179 ac--a
i Manis_pentadactyla.KN006162.1                          C 0 I 3
s Marmota_marmota.CZRN01000018.1                          33097891 3 -  40650429 at--a
i Marmota_marmota.CZRN01000018.1                         C 0 I 3
s Megaderma_lyra.MegLyr_scaffold_4542                         7245 3 -    207569 GC--A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 5
s Mellivora_capensis.MelCap_flattened_line_69365              6936 3 +     13704 AC--A
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 3
s Mesoplodon_bidens.MesBid_scaffold_108144                    3566 3 +     10310 AC--A
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 I 3
s Microcebus_murinus.CM007674.1                           18287558 3 -  93316391 ac--a
i Microcebus_murinus.CM007674.1                          C 0 I 4
s Micronycteris_hirsuta.MicHir_scaffold_52381                13874 3 -     19307 AT--A
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 3
s Miopithecus_ogouensis.k141_534055                           4562 3 -     28506 AC--A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         2208 3 -      8324 AC--A
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 4
s Mirza_zaza.k141_952172                                      5126 3 -     37649 ac--a
i Mirza_zaza.k141_952172                                 C 0 I 4
s Monodon_monoceros.MonMon_M_scaffold_103                    27071 3 -    437263 AC--A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 3
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138277 3 -    366855 at--a
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 3
s Moschus_moschiferus.MosMos_scaffold_13123                   1023 3 +     82753 AC--A
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 3
s Mungos_mungo.MunMun_flattened_line_23663                   32067 5 +     37127 ATAAA
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 3
s Muscardinus_avellanarius.MusAve_scaffold_82313              2784 3 +     14296 AT--G
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 4
s Mustela_putorius.JH418006.1                               298121 3 -  14710649 at--a
i Mustela_putorius.JH418006.1                            C 0 I 3
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186564 3 +    196477 AC--A
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 I 3
s Nasalis_larvatus.k141_413338                               10562 3 +     21681 AC--A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5866027 3 +   7148211 ac--a
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 3
s Noctilio_leporinus.NocLep_scaffold_251                    756830 3 +    783361 at--a
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 3
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146424 3 -   9404916 ac--a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 3
s Nycticebus_bengalensis.LG01                            102574939 3 - 196305487 AC--A
i Nycticebus_bengalensis.LG01                            C 0 I 4
s Nycticebus_coucang.k141_5327727                             2625 3 +      8486 AC--A
i Nycticebus_coucang.k141_5327727                        C 0 I 4
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105745366 3 + 199412804 AC--A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 4
s Ochotona_princeps.JH802162.1                             1359079 3 +   3988456 AC--A
i Ochotona_princeps.JH802162.1                           C 0 I 4
s Odobenus_rosmarus.KB229312.1                              503514 3 -   2017862 ac--a
i Odobenus_rosmarus.KB229312.1                           C 0 I 3
s Odocoileus_virginianus.KZ100018.1                         145343 3 +    630418 aC--A
i Odocoileus_virginianus.KZ100018.1                      C 0 I 3
s Okapia_johnstoni.LVCL01S0005463.1                          76854 3 -    150152 aC--G
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 3
s Orcinus_orca.KB316932.1                                  2781942 3 -  10937097 ac--a
i Orcinus_orca.KB316932.1                                C 0 I 3
s Otocyon_megalotis.JAEUCK010005147.1                       459177 3 -    559221 ac--a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 3
s Ovis_aries.CM001607.2                                   17586116 3 +  44047080 aC--G
i Ovis_aries.CM001607.2                                  C 0 I 3
s Ovis_canadensis.OviCan_scaffold_2572                      174093 3 -    191736 AC--G
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 I 3
s Pan_troglodytes.CM009242.2                             189138330 3 + 189151597 AC--A
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  147893 5 +    230217 ATACA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 3
s Panthera_pardus.KV860321.1                                261100 5 +  18783137 ataca
i Panthera_pardus.KV860321.1                             C 0 I 3
s Panthera_tigris.KE722367.1                               4717737 5 -   8748460 ataca
i Panthera_tigris.KE722367.1                             C 0 I 3
s Pantholops_hodgsonii.KE114653.1                          1265010 3 -   2937107 aC--A
i Pantholops_hodgsonii.KE114653.1                        C 0 I 3
s Papio_anubis.CM001495.2                                183438597 3 + 183742232 AC--A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             2290 3 +     20448 AC--A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20559095 3 +  20919399 AC--A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   1033 3 +     41871 AC--A
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     4319 3 +     27711 AC--A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  4404 3 +      9205 AC--A
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9552 5 -     78924 ATACA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 3
s Perodicticus_ibeanus.k141_855320                            5113 3 +     13100 AT--A
i Perodicticus_ibeanus.k141_855320                       C 0 I 4
s Perodicticus_potto.k141_1092580                             3486 3 +     25941 AT--A
i Perodicticus_potto.k141_1092580                        C 0 I 4
s Petromus_typicus.PetTyp_scaffold_42190                     26758 3 -     29689 AC--A
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 I 4
s Phocoena_phocoena.PhoPho_flattened_line_24159               8989 3 +     63832 ac--a
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 3
s Piliocolobus_badius.k141_1234363                           39074 3 +     62158 AC--A
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33796 3 +     89929 AC--A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            35212 3 +     51399 AC--A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14291448 3 -  14605196 AC--A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34695 3 +     35617 AT--A
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 I 3
s Pongo_abelii.CM009266.2                                189126523 3 + 189387572 AC--A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9566129 3 +   9816681 AC--A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68723 3 -     81375 AC--A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                               544 3 +     19060 AC--A
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2592815 3 -   4620579 ac--a
i Prolemur_simus.MPIZ01000396.1                          C 0 I 4
s Propithecus_coquerelli.NW_012148875.1                     986828 3 +   2598838 ac--a
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 4
s Propithecus_coronatus.k141_347390                          25117 3 +     38485 AC--A
i Propithecus_coronatus.k141_347390                      C 0 I 4
s Propithecus_diadema.k141_357118                             1276 3 +      4256 AC--A
i Propithecus_diadema.k141_357118                        C 0 I 4
s Propithecus_edwardsi.k141_1176054                          22636 3 +     35766 ac--a
i Propithecus_edwardsi.k141_1176054                      C 0 I 4
s Propithecus_perrieri.k141_1200571                            819 3 -     24134 AC--A
i Propithecus_perrieri.k141_1200571                      C 0 I 4
s Propithecus_tattersalli.k141_790011                        24631 3 -     67325 ac--a
i Propithecus_tattersalli.k141_790011                    C 0 I 4
s Propithecus_verreauxi.k141_956661                            876 3 -      6182 AC--A
i Propithecus_verreauxi.k141_956661                      C 0 I 4
s Pteronotus_parnellii.KE909381.1                            11671 3 -     21811 at--a
i Pteronotus_parnellii.KE909381.1                        C 0 I 3
s Pteronura_brasiliensis.PteBra_flattened_line_31117         37132 3 +     42204 AC--A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 3
s Pteropus_alecto.KB030862.1                              22974135 3 +  28871421 ac--a
i Pteropus_alecto.KB030862.1                             C 0 I 5
s Pteropus_vampyrus.KN534172.1                                2073 3 -      8028 ac--a
i Pteropus_vampyrus.KN534172.1                           C 0 I 5
s Puma_concolor.QAVW01001104.1                            20271024 5 -  38429054 ataca
i Puma_concolor.QAVW01001104.1                           C 0 I 3
s Pygathrix_cinerea.k141_1153803                             10555 3 -     91421 AC--A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7604683 3 +   7812017 AC--A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10524 3 -     72585 AC--A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5591 3 +     55207 AC--A
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 3
s Rhinolophus_sinicus.LVEH01000134.1                        367285 3 -   3329780 ac--a
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 5
s Rhinopithecus_bieti.k119_217274                             2239 3 -     11128 AC--A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91231594 3 - 195417433 AC--A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7667243 3 +   7961872 AC--A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85119 3 -     96226 ac--a
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 5
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151824 3 -    313613 at--t
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          15067 3 -     19888 AC--A
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      22269 3 +     39453 AC--A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2795 3 +     27826 AC--A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             2316 3 -     19483 AC--A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      2378 3 +      7198 AC--A
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         10638 3 +     15514 AC--A
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            188126 3 -    191337 AC--A
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 I 3
s Sorex_araneus.JH798187.1                                13648313 3 -  18376816 ac--t
i Sorex_araneus.JH798187.1                               C 0 I 2
s Spermophilus_dauricus.KZ294078.1                         1948674 3 -   3870691 at--a
i Spermophilus_dauricus.KZ294078.1                       I 14 I 3
s Spilogale_gracilis.SpiGra_flattened_line_13525             27668 3 +     97271 AC--A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 3
s Suricata_suricatta.SurSur_flattened_line_6629              14974 5 -    196729 ATACA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 3
s Sus_scrofa.CM000828.4                                   62882916 3 -  69701581 AC--A
i Sus_scrofa.CM000828.4                                  I 41 T 18237
s Symphalangus_syndactylus.tarseq_199                      1088843 3 -   1523678 AC--A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 7276 3 +     41958 AC--A
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 3
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69918 3 +    116680 AC--A
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 I 3
s Tapirus_indicus.TapInd_scaffold_9301                      115667 3 -    156842 ac--a
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 3
s Tapirus_terrestris.TapTer_scaffold_755                    384118 3 +    539355 ac--a
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 3
s Tarsius_lariang.k141_2201908                               11102 3 +     70052 ac--a
i Tarsius_lariang.k141_2201908                           C 0 I 8
s Tarsius_wallacei.k141_780063                               15407 3 +     25099 AC--A
i Tarsius_wallacei.k141_780063                           C 0 I 8
s Theropithecus_gelada.CM009954.1                        186423641 3 + 186847797 AC--A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103881 3 +    114563 AT--T
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 4
s Tolypeutes_matacus.TolMat_scaffold_228639                   2480 3 +      8208 AC--A
i Tolypeutes_matacus.TolMat_scaffold_228639              I 198 I 3
s Tonatia_saurophila.TonSau_scaffold_294                     79419 3 +    610378 at--a
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 3
s Trachypithecus_auratus.k141_722599                          6369 3 -     20410 AC--A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    10565 3 +     15221 AC--A
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        6470 3 +     19930 AC--A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2900 3 -     19997 AC--A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            43019 3 -     60166 AC--A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        10492 3 -     27529 AC--A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     10432 3 -     18194 AC--A
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           4167 3 -     21137 AC--A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2870 3 -     10723 AC--A
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         2022 3 +      9834 AC--A
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        20340 3 +     32220 AC--A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5934437 3 +   6242583 AC--A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        3684 3 +     20839 AC--A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                   1249 3 -      1748 AC--G
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 I 3
s Tupaia_chinensis.KB320699.1                              2150862 3 +   4065304 ac--a
i Tupaia_chinensis.KB320699.1                            C 0 I 1
s Tupaia_tana.TupTan_flattened_line_97126                     4160 3 -     10553 AC--A
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 1
s Tursiops_truncatus.MRVK01000835.1                       15738189 3 +  33153633 ac--a
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 3
s Uropsilus_gracilis.UroGra_scaffold_12083                   52010 3 -     77625 ac--g
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4847376 3 -   5085361 ac--a
i Ursus_maritimus.KK499267.1                             C 0 I 3
s Varecia_rubra.k141_590885                                   7503 3 +     50397 AC--A
i Varecia_rubra.k141_590885                              C 0 I 4
s Varecia_variegata.k141_1128296                              7551 3 +     24756 AC--A
i Varecia_variegata.k141_1128296                         C 0 I 4
s Vicugna_pacos.KN270157.1                                 5368846 3 -   5488506 ac--a
i Vicugna_pacos.KN270157.1                               C 0 I 3
s Vulpes_lagopus.VulLag_flattened_line_30954                  7838 3 -     43706 AC--A
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 3
s Xerus_inauris.XerIna_scaffold_48378                        20181 5 -     24430 ATATA
i Xerus_inauris.XerIna_scaffold_48378                    C 0 I 3
s Zalophus_californianus.ZalCal_flattened_line_17732          2085 3 +     86975 AC--A
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 3
s Zapus_hudsonius.ZapHud_scaffold_11398                      11160 3 +     63895 AC--A
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 4
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11881 3 +     12536 AC--A
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 I 3
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906 0 -     10935 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Rattus_norvegicus.chr8                                  20366427 90 + 133307652 I
e Psammomys_obesus.NESX01036370.1                             5629 60 -     21651 I
e Procavia_capensis.ProCapCap_scaffold_85530                 10240 0 -     22811 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823 1 +     22620 I
e Peromyscus_maniculatus.KI615324.1                       18187645 53 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pan_paniscus.KQ411613.1                                    39412 33 +     80009 I
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Onychomys_torridus.OnyTor_scaffold_2986                    74859 53 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   16750 60 +     28053 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.KL204047.1                            2026055 841 -   3037898 T
e Myotis_myotis.MyoMyo_scaffold_28916                        33016 1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456 1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390 1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692 1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520 1 +     14753 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686 0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11256415 59 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesocricetus_auratus.KB708134.1                         12178038 107 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 27995 59 +    140813 I
e Loxodonta_africana.GL010049.1                            4214777 0 -  43346337 C
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Jaculus_jaculus.JH725527.1                               8272153 0 -   9596543 C
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491 0 +       961 C
e Galagoides_demidoff.k141_31856                              3217 0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eptesicus_fuscus.JH977646.1                              2144447 1 -  14770903 I
e Ellobius_talpinus.LOJH01123422.1                            3447 60 +      5358 I
e Ellobius_lutescens.LOEQ01008920.1                          12497 60 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089268 0 +  10337057 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11663691 60 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 46705 59 +     63868 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66458 60 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       2088 17 +     62944 T-A--T-TA----A-----G----G-----T----GG-T-CCCT-T
s Acinonyx_jubatus.LLWD01001279.1                           824027 17 -   1699592 t-t--t-ta----A-----G----G-----T----GG-C-AACT-T
i Acinonyx_jubatus.LLWD01001279.1                        I 3 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     66518  1 +     87051 ---------------------------------------------c
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 60 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507467 17 -  29979442 t-t--t-ta----a-----g----g-----t----gg-a-GACT-T
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 3 C 0
s Ailurus_fulgens.LNAC01001112.1                             76042 17 -    347723 t-t--t-ta----a-----g----g-----t----GG-A-GACT-T
i Ailurus_fulgens.LNAC01001112.1                         I 3 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     65785 14 -     89534 -----T-TT----A-----G----GATGAAT----AC---------
i Allactaga_bullata.AllBul_scaffold_9566                 I 4 I 2
s Allenopithecus_nigroviridis.k141_3361533                   10067 17 -     52922 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                          9998 17 -     28001 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                           444 17 -     18505 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           1293 17 -     12518 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675825 18 -   2318259 T-T-TT-TA----A-----G----G-----T----AT-A-GACT-T
i Ammotragus_lervia.NIVO01071767.1                       I 3 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183563 17 +    412891 t-t--t-ta----a-----g----g-----t----ga-a-gact-t
i Anoura_caudifer.AnoCau_scaffold_1412                   I 3 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             98307 18 -    100397 T-T-TT-TC----A-----G----G-----T----AC-A-GACT-T
i Antilocapra_americana.AntAmePen_scaffold_12469         I 3 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7710 14 +     20879 -----T-TT----AAGATGA----A-----T----GA---------
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 4 I 2
s Arctocebus_calabarensis.k141_288239                        14884 17 +     17124 C-T--T-TA----T-----G----G-----T----GG-A-CACT-T
i Arctocebus_calabarensis.k141_288239                    I 4 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2920 17 +     43469 T-T--T-TA----A-----G----G-----T----GA-A-GACT-T
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 3 I 54
s Avahi_laniger.k141_765380                                  49764 17 -     92717 t-t--t-ta----a-----g----g-----c----gg-a-tact-t
i Avahi_laniger.k141_765380                              I 4 C 0
s Avahi_peyrierasi.k141_1424874                              50389 17 +     85213 t-t--t-ta----a-----g----g-----c----tg-a-tact-t
i Avahi_peyrierasi.k141_1424874                          I 4 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15192052 18 +  23207421 t-tt-t-ta----a-----g----g-----t----gt-a-gact-t
i Balaenoptera_acutorostrata.KI537508.1                  I 3 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2517 18 -     18090 t-tt-t-ta----a-----g----g-----t----gt-a-gact-t
i Balaenoptera_bonaerensis.DF707048.1                    I 3 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26747 18 +     34529 T-T-TT-TA----A-----G----G-----T----AT-A-GACT-T
i Beatragus_hunteri.BeaHun_scaffold_50177                I 3 C 0
s Bison_bison.KN261452.1                                    199804 18 -    288883 T-T-TT-TA----A-----G----G-----T----AT-A-GACT-T
i Bison_bison.KN261452.1                                 I 3 C 0
s Bos_indicus.CM003047.1                                  20273009 18 +  48749331 T-T-TT-TA----A-----G----G-----T----AT-A-GACT-T
i Bos_indicus.CM003047.1                                 I 3 C 0
s Bos_mutus.JH880303.1                                     1125565 18 -   1948126 T-T-TT-TA----A-----G----G-----T----AT-A-GACT-T
i Bos_mutus.JH880303.1                                   I 3 C 0
s Bos_taurus.CM000203.6                                   18083647 18 +  45695690 T-T-TT-TA----A-----G----G-----T----AT-A-GACT-T
i Bos_taurus.CM000203.6                                  I 3 C 0
s Bubalus_bubalis.KI419123.1                               2819314 18 +   4408762 T-T-TT-TA----A-----G----G-----T----AT-A-GACT-T
i Bubalus_bubalis.KI419123.1                             I 3 C 0
s Camelus_bactrianus.KN276810.1                            9999361 20 -  17673402 tttttt-ta----a-----g----g-----t----gt-a-gACT-T
i Camelus_bactrianus.KN276810.1                          I 3 C 0
s Camelus_dromedarius.KN272107.1                           2331825 20 -   7040546 tttttt-ta----a-----g----g-----t----gt-a-gACT-T
i Camelus_dromedarius.KN272107.1                         I 3 C 0
s Camelus_ferus.KB017975.1                                  400101 20 -   1652518 tttttt-ta----a-----g----g-----t----gt-a-gACT-T
i Camelus_ferus.KB017975.1                               I 3 C 0
s CanFam4.chr16                                           17796221 17 -  60362399 T-T--T-TA----A-----G----A-----T----GG-G-GACT-T
i CanFam4.chr16                                          I 3 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182278 17 -    185531 T-T--T-TA----A-----G----A-----T----GG-G-GACT-T
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 3 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031664 17 -   9314153 t-t--t-ta----a-----g----a-----t----gg-g-GACT-T
i Canis_lupus_dingo.QKWQ01000480.1                       I 3 C 0
s Canis_lupus_familiaris.chr16                            17955929 17 -  59632846 t-t--t-ta----a-----g----a-----t----gg-g-GACT-T
i Canis_lupus_familiaris.chr16                           I 3 C 0
s Canis_lupus_orion.HG994398.1                            18497229 17 +  63665305 t-t--t-ta----a-----g----a-----t----gg-g-GACT-T
i Canis_lupus_orion.HG994398.1                           I 3 C 0
s Capra_aegagrus.CM003241.1                               18829943 18 +  46296322 T-T-CT-TA----A-----G----G-----T----AT-A-GACT-T
i Capra_aegagrus.CM003241.1                              I 3 C 0
s Capra_hircus.CM004588.1                                 18060663 18 -  44709034 T-T-CT-TA----A-----G----G-----T----AT-A-GACT-T
i Capra_hircus.CM004588.1                                I 3 C 0
s Carlito_syrichta.NW_007259797.1                           141500  8 -    496798 -----------------------------------gg-t-taCT-T
i Carlito_syrichta.NW_007259797.1                        I 8 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                3337 17 -     11696 t-t--t-ta----g-----g----g-----t----ga-a-gact-t
i Carollia_perspicillata.CarPer_scaffold_92756           I 3 C 0
s Castor_canadensis.CasCan_scaffold_2074                    134267 13 +    179628 -----T-TA----A-----AAAGAA-----T----AT---------
i Castor_canadensis.CasCan_scaffold_2074                 I 4 I 2
s Catagonus_wagneri.CatWag_scaffold_2839                     89706 18 +    217609 t-tt-t-ta----a-----g----a-----t----gt-a-gagt-t
i Catagonus_wagneri.CatWag_scaffold_2839                 I 3 C 0
s Cephalopachus_bancanus.k141_2037105                         5415  8 -      8605 -----------------------------------GG-T-TACT-T
i Cephalopachus_bancanus.k141_2037105                    I 8 C 0
s Cavia_aperea.AVPZ01000300.1                             18348111  4 -  23392119 -----TATA-------------------------------------
i Cavia_aperea.AVPZ01000300.1                            I 4 I 8
s Cavia_porcellus.DS562891.1                              18360371  4 -  23407841 -----TATA-------------------------------------
i Cavia_porcellus.DS562891.1                             I 4 I 8
s Cavia_tschudii.CavTsc_scaffold_8919                        99245  4 +    143979 -----TATA-------------------------------------
i Cavia_tschudii.CavTsc_scaffold_8919                    I 4 I 8
s Ceratotherium_simum.JH767749.1                          12228338 19 +  27778364 t-tttt-ta----a-----g----g-----t----gg-a-gact-t
i Ceratotherium_simum.JH767749.1                         I 3 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          3056 19 -      3715 T-TTTT-TA----A-----G----G-----T----GG-A-GACT-T
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     I 3 C 0
s Cercocebus_atys.KQ010504.1                               4471027 17 +   4669795 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         9576 17 -     19203 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           3997 17 +      8260 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           4225 17 +     27781 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         4383 17 -     20310 T-T--T-CA----A-----G----G-----T----GG-T-CACT-T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           7367 17 +     29689 T-T--T-CA----A-----G----G-----T----GG-T-CACT-T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            1805 17 +      9989 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          10051 17 -     27936 T-A--T-CA----A-----G----G-----T----GG-T-CACG-T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                            10077 17 -     11289 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38812449 17 +  39242232 T-T--T-CA----A-----A----G-----T----GG-T-CACT-T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21218148 17 -  21565898 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       35267 17 -     53127 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        2552 17 +      7159 T-T--T-CA----A-----G----G-----T----GG-T-CACT-T
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       10070 17 -     27947 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         10046 17 +     17596 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         40546 17 -     41420 T-T--T-CA----A-----G----G-----T----GG-T-CACT-T
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            5326 17 -      6351 t-tt-t-ta----a-----g----a-----t----gg-g-tact--
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       I 3 C 0
s Cheirogaleus_major.k141_333249                             17180 17 -     52598 t-t--t-ta----a-----g----g-----t----gg-a-tgct-t
i Cheirogaleus_major.k141_333249                         I 4 C 0
s Cheirogaleus_medius.k141_1055463                           12530 17 +     57038 t-t--t-ta----a-----g----g-----t----gg-a-tgct-t
i Cheirogaleus_medius.k141_1055463                       I 4 C 0
s Chinchilla_lanigera.JH722012.1                           1251448  9 +   2543920 -----tgttaGGTA--------------------------------
i Chinchilla_lanigera.JH722012.1                         I 4 I 7
s Chlorocebus_aethiops.ctg25                              18424009 17 -  18827391 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       10450 17 -     50209 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135417458 17 + 135778131 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15619 18 +     19366 A-T-TT-TA----A-----G----A-----T----AT-A-CATT-T
i Choloepus_didactylus.ChoDid_scaffold_45914             I 3 C 0
s Choloepus_hoffmanni.KN194906.1                            170718 18 +    839153 a-tt-t-ta----a-----g----a-----t----at-a-cact-t
i Choloepus_hoffmanni.KN194906.1                         I 3 C 0
s Colobus_angolensis.KN981557.1                            1905965 17 +   2368649 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199945634 17 + 200372422 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              32506 17 +     84244 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17546774 18 -  53390261 t-tt-a-aa----a-----g----g-----t----ggaG-A-TG-T
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10972 17 -     20389 T-T--T-TA----A-----G----A-----T----GC-A-GATT-T
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 5 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 46764  1 +     63868 ---------------------------------------------c
i Cricetomys_gambianus.CriGam_scaffold_18520             I 59 C 0
s Cricetulus_griseus.LT883664.1                           11663751  1 + 224834208 ---------------------------------------------c
i Cricetulus_griseus.LT883664.1                          I 60 C 0
s Crocidura_indochinensis.CroInd_scaffold_287352               959  9 +      4208 T-T-TT-TA----A-----G----G---------------------
i Crocidura_indochinensis.CroInd_scaffold_287352         I 2 I 104
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24920 17 -     87169 T-T--T-TA----A-----G----A-----T----GG-A-GATT-T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 3 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 3520  9 +      5455 -----TGTAAGGCA--------------------------------
i Cuniculus_paca.CunPac_flattened_line_231100            I 4 I 7
s Dasyprocta_punctata.DasPun_flattened_line_206793            1873  9 +      3576 -----TGTAAGGTG--------------------------------
i Dasyprocta_punctata.DasPun_flattened_line_206793       I 4 I 7
s Dasypus_novemcinctus.JH564415.1                            61596 18 +   2246927 t-tt-t-ta----a-----g----a-----t----ga-a-tact-t
i Dasypus_novemcinctus.JH564415.1                        I 3 C 0
s Daubentonia_madagascariensis.ctg71                      12533351 17 -  12879189 t-t--t-ta----a-----g----g-----t----gg-a-tact-t
i Daubentonia_madagascariensis.ctg71                     I 4 C 0
s Delphinapterus_leucas.KZ290073.1                        16811687 18 +  35494412 t-tt-t-ga----a-----g----g-----t----at-a-gact-t
i Delphinapterus_leucas.KZ290073.1                       I 3 C 0
s Desmodus_rotundus.KZ672289.1                             8628367 17 +  20541912 t-t--t-ta----a-----g----g-----T----GG-A-GACT-T
i Desmodus_rotundus.KZ672289.1                           I 3 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  670191 19 +   1390856 t-tttt-ta----a-----g----g-----t----gg-a-gact-t
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 3 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2946 19 +    198055 t-tttt-ta----a-----g----g-----t----gg-a-gact-t
i Diceros_bicornis.DicBicMic_scaffold_5955               I 3 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    35034  9 +     67921 -----TGTAAAGTG--------------------------------
i Dinomys_branickii.DinBra_scaffold_21862                I 105 I 7
s Dolichotis_patagonum.DolPat_scaffold_30833                 32121  9 -     42551 -----TGTAAGGCG--------------------------------
i Dolichotis_patagonum.DolPat_scaffold_30833             I 4 I 7
s Eidolon_helvum.KE759718.1                                   7873 17 +     11740 t-t--t-ta----a-----g----a-----t----ga-a-gact-t
i Eidolon_helvum.KE759718.1                              I 3 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310978 18 +    607251 T-T-TT-TA----A-----G----G-----T----AT-A-GACT-T
i Elaphurus_davidianus.JRFZ01104969.1                    I 3 C 0
s Ellobius_lutescens.LOEQ01008920.1                          12557  1 -    110024 ---------------------------------------------t
i Ellobius_lutescens.LOEQ01008920.1                      I 60 C 0
s Ellobius_talpinus.LOJH01123422.1                            3507  1 +      5358 ---------------------------------------------T
i Ellobius_talpinus.LOJH01123422.1                       I 60 C 0
s Enhydra_lutris.KZ291758.1                               16326229 18 -  41312741 ttt--t-ta----a-----g----g-----t----gg-a-gACT-T
i Enhydra_lutris.KZ291758.1                              I 3 C 0
s Equus_asinus.JREZ01000139.1                              1280230 18 +   4378816 t-tt-t-ta----a-----g----g-----t----gg-a-gaca-t
i Equus_asinus.JREZ01000139.1                            I 3 C 0
s Equus_caballus.CM000403.2                               18528051 18 -  39960074 t-tt-t-ta----a-----g----g-----t----gg-a-gaca-t
i Equus_caballus.CM000403.2                              I 3 C 0
s Equus_przewalskii.KK951119.1                               30066 18 +    498745 t-tt-t-ta----a-----g----g-----t----gg-a-gaca-t
i Equus_przewalskii.KK951119.1                           I 3 C 0
s Erinaceus_europaeus.JH835339.1                           3326533  9 -   7059049 -----T-TA----A-----G----A-----T----GG---------
i Erinaceus_europaeus.JH835339.1                         I 3 I 6
s Erythrocebus_patas.Contig38                             21200640 17 -  21539334 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11363 18 +    133382 t-tt-t-ta----a-----g----a-----t----gt-a-gact-t
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 3 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             25300 18 -     44125 t-tt-t-ta----a-----g----g-----t----gt-a-gact-t
i Eubalaena_japonica.EubJap_flattened_line_31514         I 3 C 0
s Eulemur_albifrons.k141_342033                               9861 17 -     14127 T-T--T-TA----A-----G----G-----T----GG-A-TACC-T
i Eulemur_albifrons.k141_342033                          I 4 C 0
s Eulemur_collaris.k141_377015                                2559 17 -     16928 T-T--T-TA----A-----G----G-----T----GG-A-TACC-T
i Eulemur_collaris.k141_377015                           I 4 C 0
s Eulemur_coronatus.k141_885031                              11592 17 -     25546 T-T--T-TA----A-----G----G-----T----GG-A-TACC-T
i Eulemur_coronatus.k141_885031                          I 4 C 0
s Eulemur_flavifrons.k141_1184614                             8777 17 +     26330 T-T--T-TA----A-----G----G-----T----GG-A-TACC-T
i Eulemur_flavifrons.k141_1184614                        I 4 C 0
s Eulemur_fulvus.k141_544389                                 10034 17 +     23973 T-T--T-TA----A-----G----G-----T----GG-A-TACC-T
i Eulemur_fulvus.k141_544389                             I 4 C 0
s Eulemur_macaco.k141_1562045                                 8777 17 +     75513 t-t--t-ta----a-----g----g-----t----gg-a-tacc-t
i Eulemur_macaco.k141_1562045                            I 4 C 0
s Eulemur_mongoz.k141_232305                                  6729 17 +     97555 t-t--t-ta----a-----g----g-----t----gg-a-tacc-t
i Eulemur_mongoz.k141_232305                             I 4 C 0
s Eulemur_rubriventer.k141_571033                             9655 17 +     26496 t-t--t-ta----a-----g----g-----t----gg-a-tacc-t
i Eulemur_rubriventer.k141_571033                        I 4 C 0
s Eulemur_rufus.k141_1476633                                   261 17 -     17153 T-T--T-TA----A-----G----G-----T----GG-A-TACC-T
i Eulemur_rufus.k141_1476633                             I 4 C 0
s Eulemur_sanfordi.k141_1122526                               9840 17 +    111500 t-t--g-ta----a-----g----g-----t----gg-a-tacc-t
i Eulemur_sanfordi.k141_1122526                          I 4 C 0
s Felis_catus.CM001381.2                                  20233887 17 + 206538554 t-t--t-ta----A-----G----G-----T----GG-C-AACT-T
i Felis_catus.CM001381.2                                 I 3 C 0
s Felis_catus_fca126.CM031415.1                           20192734 17 + 205367284 t-t--t-ta----A-----G----G-----T----GG-C-AACT-T
i Felis_catus_fca126.CM031415.1                          I 3 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  6247 17 -     36744 T-T--T-TA----A-----G----G-----T----GG-C-AACT-T
i Felis_nigripes.FelNig_flattened_line_20823             I 3 C 0
s Galeopterus_variegatus.GalVar_scaffold_266699                 61 17 +      2098 t-g--t-ta----a-----g----g-----t----gg-a-tact-t
i Galeopterus_variegatus.GalVar_scaffold_266699          I 4 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     608943 18 -    660261 T-T-TT-TA----A-----G----G-----T----AT-A-GATT-T
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 3 C 0
s Glis_glis.GliGli_scaffold_19807                            30798 10 +     49224 -----T-TA---AA-----G----G-----C----AG---------
i Glis_glis.GliGli_scaffold_19807                        I 4 I 2
s Gorilla_beringei.k141_3596273                              11323 17 -     32273 T-A--T-TA----A-----G----G-----T----GG-T-CCCT-T
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186333471 17 + 186649187 T-A--T-TA----A-----G----G-----T----GG-T-CCCT-T
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   30519  9 +     78134 -----T-TA----A-----G----G-----T----AA---------
i Graphiurus_murinus.GraMur_scaffold_10447               I 4 I 2
s Hapalemur_alaotrensis.k141_170648                           2925 17 -     19426 T-T--T-TA----A-----G----G-----T----GG-A-TACC-T
i Hapalemur_alaotrensis.k141_170648                      I 4 C 0
s Hapalemur_gilberti.k141_488810                              8069 17 -     15286 T-T--T-TA----A-----G----G-----T----GG-A-TACC-T
i Hapalemur_gilberti.k141_488810                         I 4 C 0
s Hapalemur_griseus.k141_1511508                              9707 17 +     18253 T-T--T-TA----A-----G----G-----T----GG-A-TACC-T
i Hapalemur_griseus.k141_1511508                         I 4 C 0
s Hapalemur_meridionalis.k141_248335                          9810 17 -     41752 t-t--t-ta----a-----g----g-----t----gg-a-tacc-t
i Hapalemur_meridionalis.k141_248335                     I 4 C 0
s Hapalemur_occidentalis.k141_907772                          9643 17 -     16460 t-t--t-ta----a-----g----g-----t----gg-a-tacc-t
i Hapalemur_occidentalis.k141_907772                     I 4 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238843 17 +    327341 T-T--T-TA----A-----A----A-----T----GG-A-GACT-T
i Helogale_parvula.HelPar_flattened_line_2585            I 3 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18147 18 +     36099 T-T-TT-TA----A-----G----G-----T----AT-A-GACT-T
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 3 C 0
s Heterocephalus_glaber.JH602082.1                        20660004  9 +  22651954 -----tttaagGTA--------------------------------
i Heterocephalus_glaber.JH602082.1                       I 4 I 7
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112500 18 +    128679 A-T-TT-TA----A-----G----G-----T----GT-A-GACT-T
i Hippopotamus_amphibius.HipAmp_scaffold_9076            I 3 C 0
s Hipposideros_armiger.JXIK01000431.1                       108748 17 +   1711038 t-t--t-aa----a-----g----g-----t----ag-a-gact-t
i Hipposideros_armiger.JXIK01000431.1                    I 6 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               40189 17 +     43066 T-T--T-AA----A-----G----G-----T----AG-A-GCCT-T
i Hipposideros_galeritus.HipGal_scaffold_29171           I 6 C 0
s Hoolock_leuconedys.ctg274                                    430215 17 +    630532 T-A--T-TA----A-----G----G-----T----GG-T-CATT-T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  41374 16 +     55795 T-T--C-TA----A-----G----A-----T----GG-A-GACT--
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 3 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20497  9 -    143317 -----TGTAAGGCG--------------------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 4 I 7
s Hylobates_agilis.k141_307679                               13147 17 -     15490 T-A--T-TA----A-----G----G-----T----GG-T-CACT-T
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              55152 17 +     67168 T-A--T-TA----A-----G----G-----T----GG-T-CACT-T
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189538802 17 - 191637585 T-A--T-TA----A-----G----G-----T----GG-T-CACT-T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3331695 17 -  11177569 T-A--T-TA----A-----G----G-----T----GG-T-CACT-T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      81579  6 +    135385 -------------A-----G----G-----T----AG---------
i Hystrix_cristata.HysCri_scaffold_5660                  I 5 I 6
s Ictidomys_tridecemlineatus.JH393364.1                    7515047 14 -   7955117 -----t-tt----atgatgg----a-----t----aa---------
i Ictidomys_tridecemlineatus.JH393364.1                  I 3 I 2
s Indri_indri.k141_3655594                                   18626 17 +     31101 t-t--t-ta----a-----g----g-----t----gg-a-tgct-t
i Indri_indri.k141_3655594                               I 4 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22904 18 +     23964 T-T-TT-TA----A-----G----G-----T----AT-A-GACT-T
i Inia_geoffrensis.IniGeo_flattened_line_48101           I 3 C 0
s Jaculus_jaculus.JH725527.1                               8272153 11 -   9596543 -------------A-----G----GATGAAT----AT---------
i Jaculus_jaculus.JH725527.1                             C 0 I 2
s Kogia_breviceps.KogBre_flattened_line_192630                2266 18 -      3359 T-T-TT-TA----A-----G----G-----T----AT-A-GACT-T
i Kogia_breviceps.KogBre_flattened_line_192630           I 3 C 0
s Lemur_catta.scaffold_24                                 15520169 17 -  30322482 t-t--t-ta----a-----g----g-----t----gg-a-tacc-t
i Lemur_catta.scaffold_24                                I 4 C 0
s Lepilemur_ankaranensis.k141_596936                          7081 17 -     23766 t-t--t-ta----a-----g----g-----t----ag-a-cgct-t
i Lepilemur_ankaranensis.k141_596936                     I 4 C 0
s Lepilemur_dorsalis.k141_577674                             25028 17 +     45836 t-t--t-ta----a-----g----g-----t----ag-a-cgct-t
i Lepilemur_dorsalis.k141_577674                         I 4 C 0
s Lepilemur_ruficaudatus.k141_420445                         31940 17 -     32627 t-t--t-ta----a-----g----g-----t----ag-a-tgct-t
i Lepilemur_ruficaudatus.k141_420445                     I 4 C 0
s Lepilemur_septentrionalis.k141_185316                      23083 17 +     54090 t-t--t-ta----a-----g----g-----t----ag-a-cgct-t
i Lepilemur_septentrionalis.k141_185316                  I 4 C 0
s Leptonychotes_weddellii.KB714746.1                       3039379 16 +   3914936 --t--t-ta----a-----g----g-----t----gg-A-GACT-T
i Leptonychotes_weddellii.KB714746.1                     I 4 C 0
s Lipotes_vexillifer.KE559953.1                             267956 18 -    662738 t-tt-t-ta----a-----g----g-----t----at-a-gact-t
i Lipotes_vexillifer.KE559953.1                          I 3 C 0
s Lophocebus_aterrimus.ctg367                              1432571 17 +   1826925 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            1128 17 +     11245 T-T--T-TA----T-----G----G-----T----GG-A-TACT-T
i Loris_lydekkerianus.k141_2539221                       I 4 C 0
s Loris_tardigradus.ctg83                                   999965 17 +   6120653 T-T--T-TA----T-----G----G-----T----GG-A-TACT-T
i Loris_tardigradus.ctg83                                I 4 C 0
s Lycaon_pictus.CM007581.1                                17952169 17 -  59628241 t-t--t-ta----a-----g----a-----t----gg-g-GACT-T
i Lycaon_pictus.CM007581.1                               I 3 C 0
s Macaca_arctoides.k141_2326796                               2392 17 +     40492 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59671647 17 +  60120075 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  8147 17 -     26193 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75944 17 -    114318 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  1659 17 -     23192 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                11112 17 -     29190 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  19679 17 +     37952 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834767 17 + 187317192 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25453330 17 -  25927173 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  75528 17 +     89720 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 2526 17 +     20474 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   2327 17 -     14993 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  325199 17 -    668171 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                  630 17 -     24072 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               21266 17 -     45290 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87971 16 +     94391 --t--t-ta----a-----g----a-----t----gg-a-gact-t
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 5 C 0
s Mandrillus_leucophaeus.scaffold280                      23932815 17 -  24302211 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               346992 17 +    752769 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              16053 17 +    737560 t-t--t-ta----a-----g----g-----t----GG-A-Gact-t
i Manis_javanica.JSZB01003497.1                          I 3 C 0
s Manis_pentadactyla.KN006162.1                              47442 17 -    317179 t-t--t-ta----a-----g----g-----t----gg-a-gact-t
i Manis_pentadactyla.KN006162.1                          I 3 C 0
s Marmota_marmota.CZRN01000018.1                          33097897 14 -  40650429 -----t-tt----atgatgg----a-----t----aa---------
i Marmota_marmota.CZRN01000018.1                         I 3 I 2
s Megaderma_lyra.MegLyr_scaffold_4542                         7253 17 -    207569 T-T--T-TA----A-----G----A-----T----GG-A-GAGT-T
i Megaderma_lyra.MegLyr_scaffold_4542                    I 5 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6942 17 +     13704 T-T--T-TA----A-----G----G-----T----GG-A-GACT-T
i Mellivora_capensis.MelCap_flattened_line_69365         I 3 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 28054  1 +    140813 ---------------------------------------------c
i Meriones_unguiculatus.MerUng_scaffold_7390             I 59 C 0
s Mesocricetus_auratus.KB708134.1                         12178145  1 -  29670104 ---------------------------------------------C
i Mesocricetus_auratus.KB708134.1                        I 107 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3572 18 +     10310 T-T-TT-TA----A-----G----G-----T----AC-A-GACT-T
i Mesoplodon_bidens.MesBid_scaffold_108144               I 3 C 0
s Microcebus_murinus.CM007674.1                           18287565 17 -  93316391 T-T--T-TA----A-----G----G-----T----GG-A-TGCT-T
i Microcebus_murinus.CM007674.1                          I 4 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13880 17 -     19307 T-T--T-TA----A-----G----G-----T----GG-A-GACT-T
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 3 C 0
s Microtus_ochrogaster.CM001695.1                         11256474  1 -  27267610 ---------------------------------------------C
i Microtus_ochrogaster.CM001695.1                        I 59 C 0
s Miopithecus_ogouensis.k141_534055                           4565 17 -     28506 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         2215 16 -      8324 --T--T-TA----A-----G----G-----T----GG-A-GACT-T
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 4 C 0
s Mirza_zaza.k141_952172                                      5133 17 -     37649 t-t--t-ta----a-----g----g-----t----gg-a-tgct-t
i Mirza_zaza.k141_952172                                 I 4 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    27077 18 -    437263 T-T-TT-GA----A-----G----G-----T----AT-A-GACT-T
i Monodon_monoceros.MonMon_M_scaffold_103                I 3 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138283 17 -    366855 t-t--t-ta----a-----g----g-----t----ag-a-ggct-t
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 3 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   1029 18 +     82753 T-T-TT-TA----A-----G----G-----T----AC-A-GACT-T
i Moschus_moschiferus.MosMos_scaffold_13123              I 3 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   32075 17 +     37127 T-T--T-TA----A-----A----A-----T----GG-A-GACT-T
i Mungos_mungo.MunMun_flattened_line_23663               I 3 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2791  9 +     14296 -----T-TA----A-----G----G-----T----AG---------
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 4 I 2
s Mustela_putorius.JH418006.1                               298127 17 -  14710649 t-t--t-ta----a-----g----g-----t----gg-a-GACT-T
i Mustela_putorius.JH418006.1                            I 3 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186570 17 +    196477 --T-TT-TA----A-----G----A-----T----AT-A-TACA-T
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 3 C 0
s Nasalis_larvatus.k141_413338                               10565 17 +     21681 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5866033 18 +   7148211 t-tt-t-ta----a-----g----g-----t----at-a-gact-t
i Neophocaena_asiaeorientalis.KZ687982.1                 I 3 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756836 18 +    783361 t-tt-t-ta----c-----g----g-----t----gg-a-gact-t
i Noctilio_leporinus.NocLep_scaffold_251                 I 3 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146430 17 -   9404916 t-t--t-ta----a-----g----a-----t----gg-g-GACt-t
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 3 C 0
s Nycticebus_bengalensis.LG01                            102574946 17 - 196305487 T-T--T-TA----T-----G----G-----T----GG-A-TACT-T
i Nycticebus_bengalensis.LG01                            I 4 C 0
s Nycticebus_coucang.k141_5327727                             2632 17 +      8486 T-T--T-TA----T-----G----G-----T----GG-A-TACT-T
i Nycticebus_coucang.k141_5327727                        I 4 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105745373 17 + 199412804 T-T--T-TA----T-----G----G-----T----GG-A-TACT-T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 4 C 0
s Ochotona_princeps.JH802162.1                             1359086 14 +   3988456 -----TCTA----A-----G----G-----TGTACAG---------
i Ochotona_princeps.JH802162.1                           I 4 I 2
s Odobenus_rosmarus.KB229312.1                              503520 17 -   2017862 t-t--t-ta----a-----g----g-----t----gg-a-gatt-t
i Odobenus_rosmarus.KB229312.1                           I 3 C 0
s Odocoileus_virginianus.KZ100018.1                         145349 18 +    630418 T-T-TT-TA----A-----G----G-----T----AT-A-GACT-T
i Odocoileus_virginianus.KZ100018.1                      I 3 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          76860 18 -    150152 T-T-TT-TA----A-----G----G-----T----AT-A-GACT-T
i Okapia_johnstoni.LVCL01S0005463.1                      I 3 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   16810  1 +     28053 ---------------------------------------------C
i Ondatra_zibethicus.OndZib_scaffold_46174               I 60 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    74912  1 +    102263 ---------------------------------------------c
i Onychomys_torridus.OnyTor_scaffold_2986                I 53 C 0
s Orcinus_orca.KB316932.1                                  2781948 18 -  10937097 t-tt-t-ta----a-----g----g-----t----at-a-gact-t
i Orcinus_orca.KB316932.1                                I 3 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       459183 17 -    559221 t-t--t-ta----a-----g----a-----t----gg-G-GACT-T
i Otocyon_megalotis.JAEUCK010005147.1                    I 3 C 0
s Ovis_aries.CM001607.2                                   17586122 18 +  44047080 T-T-TT-TA----A-----G----G-----T----AT-A-GACT-T
i Ovis_aries.CM001607.2                                  I 3 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      174099 18 -    191736 T-T-TT-TA----A-----G----G-----T----AT-A-GACT-T
i Ovis_canadensis.OviCan_scaffold_2572                   I 3 C 0
s Pan_paniscus.KQ411613.1                                    39445 12 +     80009 -------------A-----G----G-----T----GG-T-CCCT-T
i Pan_paniscus.KQ411613.1                                I 33 C 0
s Pan_troglodytes.CM009242.2                             189138333 17 + 189151597 T-A--T-TA----A-----G----G-----T----GG-T-CCCT-T
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  147901 17 +    230217 T-T--T-TA----A-----G----G-----T----GA-C-AACT-T
i Panthera_onca.PanOnc_flattened_line_3271               I 3 C 0
s Panthera_pardus.KV860321.1                                261108 17 +  18783137 t-t--t-ta----A-----G----G-----T----GA-C-AACT-T
i Panthera_pardus.KV860321.1                             I 3 C 0
s Panthera_tigris.KE722367.1                               4717745 17 -   8748460 t-t--t-ta----A-----G----G-----T----GA-C-AACT-T
i Panthera_tigris.KE722367.1                             I 3 C 0
s Pantholops_hodgsonii.KE114653.1                          1265016 18 -   2937107 T-T-TT-TA----A-----G----G-----T----AT-A-GACT-T
i Pantholops_hodgsonii.KE114653.1                        I 3 C 0
s Papio_anubis.CM001495.2                                183438600 17 + 183742232 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             2293 17 +     20448 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20559098 17 +  20919399 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   1036 17 +     41871 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     4322 17 +     27711 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  4407 17 +      9205 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9560 17 -     78924 T-T--A-TA----A-----G----G-----T----GG-A-GACT-T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 3 C 0
s Perodicticus_ibeanus.k141_855320                            5120 17 +     13100 C-T--T-TA----T-----G----G-----T----GG-A-TACT-T
i Perodicticus_ibeanus.k141_855320                       I 4 C 0
s Perodicticus_potto.k141_1092580                             3493 17 +     25941 C-T--T-TA----T-----G----G-----T----GG-A-TACT-T
i Perodicticus_potto.k141_1092580                        I 4 C 0
s Peromyscus_maniculatus.KI615324.1                       18187698  1 -  18517816 ---------------------------------------------c
i Peromyscus_maniculatus.KI615324.1                      I 53 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     26765  8 -     29689 -----ATTAAG-TA--------------------------------
i Petromus_typicus.PetTyp_scaffold_42190                 I 4 I 7
s Phocoena_phocoena.PhoPho_flattened_line_24159               8995 18 +     63832 t-tt-t-ta----a-----g----g-----t----at-a-gact-t
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 3 C 0
s Piliocolobus_badius.k141_1234363                           39077 17 +     62158 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33799 17 +     89929 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            35215 17 +     51399 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14291451 17 -  14605196 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34701 18 +     35617 G-T-TT-TA----A-----G----G-----T----AT-A-GACT-T
i Platanista_gangetica.PlaMin_flattened_line_32310       I 3 C 0
s Pongo_abelii.CM009266.2                                189126526 17 + 189387572 T-A--T-TA----A-----G----G-----T----GG-T-CAGT-T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9566132 17 +   9816681 T-A--T-TA----A-----G----G-----T----GG-T-CAGT-T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68726 17 -     81375 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                               547 17 +     19060 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2592822 17 -   4620579 t-t--t-ta----a-----g----g-----T----GG-A-TACC-T
i Prolemur_simus.MPIZ01000396.1                          I 4 C 0
s Propithecus_coquerelli.NW_012148875.1                     986835 17 +   2598838 T-T--T-TA----A-----G----G-----T----GG-A-TACT-T
i Propithecus_coquerelli.NW_012148875.1                  I 4 C 0
s Propithecus_coronatus.k141_347390                          25124 17 +     38485 T-T--T-TA----A-----G----G-----T----GG-A-TACT-T
i Propithecus_coronatus.k141_347390                      I 4 C 0
s Propithecus_diadema.k141_357118                             1283 17 +      4256 T-T--T-TA----A-----G----G-----T----GG-A-TACT-T
i Propithecus_diadema.k141_357118                        I 4 C 0
s Propithecus_edwardsi.k141_1176054                          22643 17 +     35766 t-t--t-ta----a-----g----g-----t----gg-a-tact-t
i Propithecus_edwardsi.k141_1176054                      I 4 C 0
s Propithecus_perrieri.k141_1200571                            826 17 -     24134 T-T--T-TA----A-----G----G-----C----AG-A-TACT-T
i Propithecus_perrieri.k141_1200571                      I 4 C 0
s Propithecus_tattersalli.k141_790011                        24638 17 -     67325 t-t--t-ta----a-----g----g-----t----gg-a-tact-t
i Propithecus_tattersalli.k141_790011                    I 4 C 0
s Propithecus_verreauxi.k141_956661                            883 17 -      6182 T-T--T-TA----A-----G----G-----T----GG-A-TACT-T
i Propithecus_verreauxi.k141_956661                      I 4 C 0
s Psammomys_obesus.NESX01036370.1                             5689  1 -     21651 ---------------------------------------------c
i Psammomys_obesus.NESX01036370.1                        I 60 C 0
s Pteronotus_parnellii.KE909381.1                            11677 18 -     21811 t-t--t-ta----a-----g----g-----t----gg-A-GACTGA
i Pteronotus_parnellii.KE909381.1                        I 3 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         37138 17 +     42204 T-T--T-TA----A-----G----G-----T----GG-A-GACT-T
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 3 C 0
s Pteropus_alecto.KB030862.1                              22974143 17 +  28871421 t-t--t-ta----a-----g----a-----t----gg-a-gaTT-T
i Pteropus_alecto.KB030862.1                             I 5 C 0
s Pteropus_vampyrus.KN534172.1                                2081 17 -      8028 t-t--t-ta----a-----g----a-----t----gg-a-gaTT-T
i Pteropus_vampyrus.KN534172.1                           I 5 C 0
s Puma_concolor.QAVW01001104.1                            20271032 17 -  38429054 t-t--t-ta----A-----G----G-----T----GG-C-AACT-T
i Puma_concolor.QAVW01001104.1                           I 3 C 0
s Pygathrix_cinerea.k141_1153803                             10558 17 -     91421 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7604686 17 +   7812017 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10527 17 -     72585 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5597 18 +     55207 T-T-TT-TA----A-----A----G-----T----AT-A-GACT-T
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 3 C 0
s Rattus_norvegicus.chr8                                 113028504  1 - 133307652 ---------------------------------------------C
i Rattus_norvegicus.chr8                                 I 67 I 98
s Rhinolophus_sinicus.LVEH01000134.1                        367293 17 -   3329780 t-t--t-aa----a-----g----g-----t----ag-g-gact-t
i Rhinolophus_sinicus.LVEH01000134.1                     I 5 C 0
s Rhinopithecus_bieti.k119_217274                             2242 17 -     11128 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91231597 17 - 195417433 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7667246 17 +   7961872 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85127 17 -     96226 t-t--t-ta----a-----g----a-----t----cc-a-gact-t
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 5 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151827 18 -    313613 t-tt-t-aa----a-----g----g-----t----ggag-a-tg-t
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          15070 17 -     19888 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      22272 17 +     39453 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2798 17 +     27826 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             2319 17 -     19483 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      2381 17 +      7198 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         10641 17 +     15514 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            188132 20 -    191337 T-T-TT-TA----A-----G----G-----T----GACACAAAT-T
i Solenodon_paradoxus.SolPar_flattened_line_5840         I 3 C 0
s Sorex_araneus.JH798187.1                                13648318 19 -  18376816 t-T-TT-TA----A-----G----G-----T----TAAA-GTCT-T
i Sorex_araneus.JH798187.1                               I 2 C 0
s Spermophilus_dauricus.KZ294078.1                         1948680 14 -   3870691 -----t-tt----atgatgg----a-----t----aa---------
i Spermophilus_dauricus.KZ294078.1                       I 3 I 2
s Spilogale_gracilis.SpiGra_flattened_line_13525             27674 17 +     97271 T-T--T-TA----A-----G----G-----T----GG-A-GACT-T
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 3 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              14982 17 -    196729 T-T--T-TA----A-----A----A-----T----GG-A-GCCT-T
i Suricata_suricatta.SurSur_flattened_line_6629          I 3 C 0
s Sus_scrofa.JH118708.1                                      32199 18 -     47482 t-tt-t-ta----a-----g----g-----t----gt-a-gagt-t
i Sus_scrofa.JH118708.1                                  I 6 C 0
s Symphalangus_syndactylus.tarseq_199                      1088846 17 -   1523678 T-A--T-TA----A-----G----G-----T----GG-T-CACT-T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 7282 17 +     41958 T-T--T-TA----A-----G----G-----T----GG-G-GACT-T
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 3 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69924 17 +    116680 --T-TT-TA----A-----G----A-----T----AA-A-TACA-C
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 3 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115673 19 -    156842 t-cttt-ta----a-----g----g-----c----gg-a-gact-t
i Tapirus_indicus.TapInd_scaffold_9301                   I 3 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    384124 19 +    539355 t-tttt-ta----a-----g----g-----t----gg-a-gact-t
i Tapirus_terrestris.TapTer_scaffold_755                 I 3 C 0
s Tarsius_lariang.k141_2201908                               11113  8 +     70052 -----------------------------------gg-t-tact-t
i Tarsius_lariang.k141_2201908                           I 8 C 0
s Tarsius_wallacei.k141_780063                               15418  8 +     25099 -----------------------------------GG-T-TACT-T
i Tarsius_wallacei.k141_780063                           I 8 C 0
s Theropithecus_gelada.CM009954.1                        186423644 17 + 186847797 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103888  9 +    114563 -----TTTAAGGTA--------------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 4 I 7
s Tolypeutes_matacus.TolMat_scaffold_228639                   2486 18 +      8208 T-T-TT-TA----A-----G----A-----T----GG-A-TACT-T
i Tolypeutes_matacus.TolMat_scaffold_228639              I 3 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     79425 17 +    610378 t-t--t-ta----a-----g----g-----t----ga-a-tact-t
i Tonatia_saurophila.TonSau_scaffold_294                 I 3 C 0
s Trachypithecus_auratus.k141_722599                          6372 17 -     20410 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    10568 17 +     15221 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        6473 17 +     19930 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2903 17 -     19997 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            43022 17 -     60166 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        10495 17 -     27529 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     10435 17 -     18194 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           4170 17 -     21137 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2873 17 -     10723 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         2025 17 +      9834 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        20343 17 +     32220 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5934440 17 +   6242583 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        3687 17 +     20839 T-A--T-CA----A-----G----G-----T----GG-T-CACT-T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                   1255 18 -      1748 T-T-TT-TA----A-----G----G-----T----GT-A-AACT-T
i Tragulus_javanicus.TraJav_scaffold_140459              I 3 I 28
s Tupaia_chinensis.KB320699.1                              2150866 17 +   4065304 t-t--t-ta----a-----g----g-----t----aa-a-ttct-t
i Tupaia_chinensis.KB320699.1                            I 1 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     4164 17 -     10553 T-G--T-TA----A-----G----G-----T----AA-A-TTCT-T
i Tupaia_tana.TupTan_flattened_line_97126                I 1 C 0
s Tursiops_truncatus.MRVK01000835.1                       15738195 18 +  33153633 t-tt-t-ta----a-----g----g-----t----at-a-gact-t
i Tursiops_truncatus.MRVK01000835.1                      I 3 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   52013 19 -     77625 t-tt-t-aa----a-----g----g-----t----caag-agta-t
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4847382 17 -   5085361 t-t--t-ta----a-----g----g-----t----gg-a-GACT-T
i Ursus_maritimus.KK499267.1                             I 3 C 0
s Varecia_rubra.k141_590885                                   7510 17 +     50397 T-T--T-TA----A-----G----G-----T----GG-A-TACC-T
i Varecia_rubra.k141_590885                              I 4 C 0
s Varecia_variegata.k141_1128296                              7558 17 +     24756 T-T--T-TA----A-----G----G-----T----GG-A-TACC-T
i Varecia_variegata.k141_1128296                         I 4 C 0
s Vicugna_pacos.KN270157.1                                 5368852 19 -   5488506 t-tttt-ta----a-----g----g-----t----gc-a-gact-t
i Vicugna_pacos.KN270157.1                               I 3 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7844 17 -     43706 T-T--T-TA----A-----G----A-----T----GG-G-GACT-T
i Vulpes_lagopus.VulLag_flattened_line_30954             I 3 C 0
s Xerus_inauris.XerIna_scaffold_48378                        20189 14 -     24430 -----T-TT----ATAATGG----A-----T----AA---------
i Xerus_inauris.XerIna_scaffold_48378                    I 3 I 2
s Zalophus_californianus.ZalCal_flattened_line_17732          2091 16 +     86975 --T--T-TA----A-----G----G-----T----GG-A-GATT-T
i Zalophus_californianus.ZalCal_flattened_line_17732     I 3 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      11167 14 +     63895 -----T-TT----A-----G----GATGAAT----GC---------
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 4 I 1
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11887 18 +     12536 T-T-TT-TA----A-----G----G-----T----AC-A-GACT-T
i Ziphius_cavirostris.ZipCav_flattened_line_71469        I 3 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.KL204047.1                            2026055 841 -   3037898 T
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Galagoides_demidoff.k141_31856                              3217  0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       2105 29 +     62944 TACT--AAA-A-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
s Acinonyx_jubatus.LLWD01001279.1                           824044 28 -   1699592 TACT--A-A-T-at-gg-aa-ga--------t-aa--a-aat---a-t----aaa---------t
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     66519 26 +     87051 tact--AAG-T-A-TAG-AG-GA--------T-AG--A-AGG---ATT-----------------
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 13
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507484 29 -  29979442 TACT--ACA-T-at-gg-ag-aa--------t-aa--a-aat---a-t----aaa---------t
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 18
s Ailurus_fulgens.LNAC01001112.1                             76059 29 -    347723 TACT--ACA-T-AT-gg-ag-ta--------t-aa--a-aat---a-t----aaa---------t
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 226
s Allactaga_bullata.AllBul_scaffold_9566                     65801 26 -     89534 TACT--AAG-T-G-TGG-AA-GA--------C-AA--A-ATG---ATG-----------------
i Allactaga_bullata.AllBul_scaffold_9566                 I 2 I 12
s Allenopithecus_nigroviridis.k141_3361533                   10084 29 -     52922 TACT--AAA-T-GT-GA-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         10015 29 -     28001 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                           461 29 -     18505 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           1310 29 -     12518 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675843 20 -   2318259 TACT--AAA-C-AT-GG-AG-AA--------T-TA--A---------------------------
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183580 29 +    412891 tatt--aca-t-gt-ta-ag-ta--------t-aa--a-aat---a-t----aaa---------t
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             98325 20 -    100397 CACT--AAA-C-AT-GG-AG-AA--------T-TA--A---------------------------
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7726 24 +     20879 TACT--GAA-T-G--TG-GA-GA--------A-AA--A-AAG---A-T-----------------
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 2 I 13
s Arctocebus_calabarensis.k141_288239                        14901 29 +     17124 TACA--AAA-C-AT-GA-AA-AG--------T-AA--G-AAG---A-T----TAA---------T
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  2991 29 +     43469 TACT--ACA-T-GT-TA-AG-TA--------T-AA--A-AAT---A-T----AAA---------T
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 54 C 0
s Avahi_laniger.k141_765380                                  49781 38 -     92717 tact--aaa-t-gt-gg-ag-ga--------t-aa--a-aag---a-t----taataagattaat
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              50406 38 +     85213 tact--aaa-t-gt-gg-ag-ga--------t-aa--a-aag---a-t----taataagattaat
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15192070 29 +  23207421 tact--aaa-c-gt-gg-aa-ga--------t-aa--a-aat---g-t----aag---------t
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2535 29 -     18090 tact--aaa-c-gt-gg-aa-ga--------t-aa--a-aat---g-t----aag---------t
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26765 20 +     34529 TACT--AAA-C-AT-GG-AG-AA--------T-TA--A---------------------------
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    199822 20 -    288883 TACT--AAA-C-AT-GG-AG-AA--------T-TA--A---------------------------
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20273027 20 +  48749331 TACT--AAA-C-AT-GG-AG-AA--------T-TA--A---------------------------
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1125583 20 -   1948126 TACT--AAA-C-AT-GG-AG-AA--------T-TA--A---------------------------
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18083665 20 +  45695690 TACT--AAA-C-AT-GG-AG-AA--------T-TA--A---------------------------
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2819332 20 +   4408762 TACT--AAA-T-AT-GG-AG-AA--------T-TA--A---------------------------
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9999381 19 -  17673402 TACT--GAC-T-GT-GG-AG-GA--------T-GA------------------------------
i Camelus_bactrianus.KN276810.1                          C 0 I 9
s Camelus_dromedarius.KN272107.1                           2331845 19 -   7040546 TACT--GAC-T-GT-GG-AG-GA--------T-GA------------------------------
i Camelus_dromedarius.KN272107.1                         C 0 I 9
s Camelus_ferus.KB017975.1                                  400121 19 -   1652518 TACT--GAC-T-GT-GG-AG-GA--------T-GA------------------------------
i Camelus_ferus.KB017975.1                               C 0 I 9
s CanFam4.chr16                                           17796238 29 -  60362399 TATT--AAA-T-GT-GA-AG-aa--------t-aa--a-aat---a-t----aaa---------t
i CanFam4.chr16                                          C 0 I 18
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182295 29 -    185531 TATT--AAA-T-GT-GA-AG-AA--------T-AA--A-AAT---A-T----AAA---------T
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 I 18
s Canis_lupus_dingo.QKWQ01000480.1                         9031681 29 -   9314153 TATT--Aaa-t-gt-ga-ag-aa--------t-aa--a-aat---a-t----aaa---------t
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 18
s Canis_lupus_familiaris.chr16                            17955946 29 -  59632846 TATT--Aaa-t-gt-ga-ag-aa--------t-aa--a-aat---a-t----aaa---------t
i Canis_lupus_familiaris.chr16                           C 0 I 18
s Canis_lupus_orion.HG994398.1                            18497246 29 +  63665305 TATT--AAa-t-gt-ga-ag-aa--------t-aa--a-aat---a-t----aaa---------t
i Canis_lupus_orion.HG994398.1                           C 0 I 18
s Capra_aegagrus.CM003241.1                               18829961 20 +  46296322 TACT--AAA-C-AT-AG-AG-AA--------T-TA--A---------------------------
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18060681 20 -  44709034 TACT--AAA-C-AT-AG-AG-AA--------T-TA--A---------------------------
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           141508 28 -    496798 -ACA--AAA-T-GT-gg-ag-aa--------c-aa--a-aaa---a-t----taa---------t
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                3354 29 -     11696 tact--aca-t-gt-ta-ag-ta--------t-aa--a-aat---a-t----aaa---------t
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    134282 25 +    179628 TACT--GAA-T-A-TGG-AG-GA--------C-AA--A-ATA---A-T-----------------
i Castor_canadensis.CasCan_scaffold_2074                 I 2 I 13
s Catagonus_wagneri.CatWag_scaffold_2839                     89724 29 +    217609 tact--aaa-t-gt-gg-ag-ta--------t-aa--a-aat---g-t----aaa---------t
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18348123 31 -  23392119 TACT--ATT-T-G--TG-AG-ATCCCC----T-ga--a-gag---g-a---g--a---------t
i Cavia_aperea.AVPZ01000300.1                            I 8 C 0
s Cavia_porcellus.DS562891.1                              18360383 31 -  23407841 TACT--ATT-T-G--TG-AG-ATCCCC----T-GA--A-GAA---G-A---G--A---------T
i Cavia_porcellus.DS562891.1                             I 8 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        99257 31 +    143979 TACT--ATT-T-G--TG-AG-ATCCCC----T-GA--A-GAA---G-A---G--A---------T
i Cavia_tschudii.CavTsc_scaffold_8919                    I 8 C 0
s Cephalopachus_bancanus.k141_2037105                         5423 28 -      8605 -ACA--AAA-T-GT-GG-AG-AA--------C-AA--A-AAA---A-T----TAA---------T
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12228357 29 +  27778364 tact--aaa-t-gt-gg-ag-gg--------t-aa--a-aat---a-t----aaa---------t
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          3075 29 -      3715 TACT--AAA-T-GT-GG-AG-GG--------T-AA--A-AAT---A-T----AAA---------T
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4471044 29 +   4669795 TACT--AAA-T-GT-GG-AA-GA--------C-AT--G-AAG---A-T----CAA---------T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         9593 29 -     19203 TACT--AAA-T-GT-GG-AA-GA--------C-AT--G-AAG---A-T----CAA---------T
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           4014 29 +      8260 TACT--AAA-T-GT-GG-AA-GA--------C-AT--G-AAG---A-T----CAA---------T
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           4242 29 +     27781 GACT--AAA-T-GT-GG-AA-GA--------C-AT--G-AAG---A-T----CAA---------T
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         4400 29 -     20310 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           7384 29 +     29689 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            1822 18 +      9989 TACT--AAA-T-GT-GG-AA-GA--------C-A-------------------------------
i Cercopithecus_diana.k141_2427854                       C 0 I 9
s Cercopithecus_hamlyni.k141_187466                          10068 29 -     27936 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                            10094 29 -     11289 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38812466 29 +  39242232 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21218165 29 -  21565898 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       35284 29 -     53127 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        2569 29 +      7159 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       10087 29 -     27947 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         10063 29 +     17596 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         40563 30 -     41420 TACT--AAAAT-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            5343 29 -      6351 tact--aaa-t-gt-gg-cg-ga--------t-aa--a-aag---a-t----gtg---------t
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             17197 38 -     52598 tact--ata-t-gt-gg-ag-ca--------t-aa--a-aag---a-t----taataagattaat
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12547 38 +     57038 tact--aaa-t-gt-gg-ag-ga--------t-aa--a-aag---a-t----taataagattaat
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1251464 31 +   2543920 TACT--AAA-T-A--TG-AAGTTCCC-----C-AA--A-GTG---G-A---G--A---------T
i Chinchilla_lanigera.JH722012.1                         I 7 C 0
s Chlorocebus_aethiops.ctg25                              18424026 29 -  18827391 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       10467 29 -     50209 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135417475 29 + 135778131 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15637 29 +     19366 AACT--AAA-T-GT-GG-AA-GA--------T-AA--A-ATG---A-T----GTG---------T
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170736 29 +    839153 aact--aaa-t-gt-gg-aa-ga--------t-aa--a-atg---a-t----gtg---------t
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1905982 29 +   2368649 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TCA---------T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199945651 29 + 200372422 TACT--GAA-T-GT-GG-AA-GA--------C-AT--A-GAG---A-T----TCA---------T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              32523 29 +     84244 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TCA---------T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17546792 29 -  53390261 TATT--AAa-t-gt-gg-ag-aa--------a-ta--a-aat---a-ta-a-a-----------t
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          10989 29 -     20389 TATT--AAA-T-GT-GG-AG-AT--------T-AA--A-CAT---A-T----AAA---------T
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 46765 26 +     63868 tact--aAG-T-G-TAG-AG-GA--------T-AA--A-CTA---ACT-----------------
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 12
s Cricetulus_griseus.LT883664.1                           11663752 26 + 224834208 tatt--AAG-A-G-TAG-AG-GA--------T-AA--A-CTG---ACT-----------------
i Cricetulus_griseus.LT883664.1                          C 0 I 13
s Crocidura_indochinensis.CroInd_scaffold_239572              1820 27 -      5012 TATT--AAA-T-AT-GG-AG-GG--------T-AA--A-AAT---A-T----A-----------C
i Crocidura_indochinensis.CroInd_scaffold_239572         I 66 I 58
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24937 28 -     87169 TACT--A-A-T-AT-GG-AA-GA--------T-AA--A-AAT---A-T----AAA---------T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 3536 30 +      5455 TACT--AAA-T-A--TG-AG-ATCCC-----C-AA--A-GAG---G-A---G--A---------T
i Cuniculus_paca.CunPac_flattened_line_231100            I 7 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1889 31 +      3576 TACT--AAA-T-A--TG-AG-ATACCC----C-AA--A-GAG---G-A---G--A---------T
i Dasyprocta_punctata.DasPun_flattened_line_206793       I 7 C 0
s Dasypus_novemcinctus.JH564415.1                            61614 29 +   2246927 tact--aaa-t-gt-gg-ca-ag--------t-aa--a-aag---a-t----gtg---------t
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12533368 29 -  12879189 tact--aca-t-gt-gg-ag-aa--------a-ag--a-aag---a-t----taa---------t
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811705 29 +  35494412 tact--aaa-c-gt-gg-aa-ga--------t-aa--a-aat---g-t----aag---------t
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8628384 29 +  20541912 TACT--ACA-T-GT-ta-ag-ta--------c-aa--a-aat---a-t----aaa---------t
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  670210 29 +   1390856 tact--aaa-t-gt-ga-ag-gg--------t-aa--a-aat---a-t----aaa---------t
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2965 29 +    198055 tact--aaa-t-gt-gg-ag-gg--------t-aa--a-aat---a-t----aaa---------t
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    35050 31 +     67921 TACT--AAA-T-A--TG-AAGTTCCC-----C-AA--A-CAG---G-A---G--A---------T
i Dinomys_branickii.DinBra_scaffold_21862                I 7 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 32137 35 -     42551 TACT--AAA-T-G--TG-TG-ACCCCCCCCCC-AA--A-GAG---G-A---G--A---------T
i Dolichotis_patagonum.DolPat_scaffold_30833             I 7 C 0
s Eidolon_helvum.KE759718.1                                   7890 29 +     11740 cact--aaa-t-gt-gg-ag-ga--------t-aa--a-aat---a-t----aaa---------t
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       310996 20 +    607251 TACT--AAA-C-AT-GG-AG-AA--------C-TA--A---------------------------
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          12558 26 -    110024 tatt--gag-t-g-tag-ag-aa--------t-aa--a-CTT---ACT-----------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 13
s Ellobius_talpinus.LOJH01123422.1                            3508 26 +      5358 TATT--AAG-T-G-TAG-AG-AA--------T-AA--A-CTT---ACT-----------------
i Ellobius_talpinus.LOJH01123422.1                       C 0 I 13
s Enhydra_lutris.KZ291758.1                               16326247 29 -  41312741 TACT--AAA-T-AT-gg-ag-aa--------t-aa--a-aat---a-t----caa---------t
i Enhydra_lutris.KZ291758.1                              C 0 I 18
s Equus_asinus.JREZ01000139.1                              1280248 29 +   4378816 tact--aaa-t-gt-gg-ag-gg--------t-aa--a-aat---a-t----aaa---------t
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18528069 29 -  39960074 tact--aaa-t-gt-gg-ag-gg--------t-aa--a-aat---a-t----aaa---------t
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               30084 29 +    498745 tact--aaa-t-gt-gg-ag-gg--------t-aa--a-aat---a-t----aaa---------t
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3326548 26 -   7059049 TATA--AAA-T-GT-AG-AG-G---------A-AA--A-AAT---A-C----A-----------A
i Erinaceus_europaeus.JH835339.1                         I 6 C 0
s Erythrocebus_patas.Contig38                             21200657 29 -  21539334 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11381 29 +    133382 tact--aaa-c-gt-gg-aa-ga--------t-aa--a-aat---g-t----aag---------t
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             25318 29 -     44125 tact--aaa-c-at-gg-aa-ga--------t-aa--a-agt---g-t----aag---------t
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Eulemur_albifrons.k141_342033                               9878 38 -     14127 TACT--AAA-T-GT-GG-AG-GA--------T-AA--A-AAG---A-T----TAATAAGATTAAT
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                2576 38 -     16928 TACT--AAA-T-GT-GG-AG-GA--------T-AA--A-AAT---A-T----TAATAAGATTAAT
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              11609 38 -     25546 TAAT--AAA-T-GT-GG-AG-GA--------T-AA--A-AAG---A-T----TAATAAGATTAAT
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             8794 38 +     26330 TACT--AAA-T-GT-GG-AG-GA--------T-AA--A-AAG---A-T----TAATAAGATTAAT
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 10051 38 +     23973 TACT--AAA-T-GT-GG-AG-GA--------T-AA--A-AAG---A-T----TAATAAGATTAAT
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 8794 38 +     75513 tact--aaa-t-gt-gg-ag-ga--------t-aa--a-aag---a-t----taataagattaat
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  6746 38 +     97555 tact--aaa-t-gt-gg-ag-ga--------t-aa--a-aag---a-t----taataagattaat
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                             9672 38 +     26496 tact--aaa-t-gt-gg-ag-ga--------t-aa--a-aag---a-t----taataagattaat
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                   278 38 -     17153 TACT--AAA-T-GT-GG-AG-GA--------T-AA--A-AAG---A-T----TAATAAGATTAAT
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                               9857 38 +    111500 tact--aaa-t-gt-gg-ag-ga--------t-aa--a-aag---a-t----taataagattaat
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20233904 28 + 206538554 TACT--A-A-T-at-gg-aa-ga--------t-aa--a-aat---a-t----aaa---------t
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20192751 28 + 205367284 TACT--A-A-T-at-gg-aa-ga--------t-aa--a-aat---a-t----aaa---------t
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  6264 28 -     36744 TACT--A-A-T-AT-GG-AA-GA--------T-AA--A-AAT---A-T----AAA---------T
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galagoides_demidoff.k141_31856                              3217 28 -      3432 -------ct-t-at-gg-aattg--------g-aa--a-aagaata-a----taa---------t
i Galagoides_demidoff.k141_31856                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_266699                 78 29 +      2098 catt--aaa-t-tt-gg-ag-aa--------t-aa--a-aag---a-t----taa---------t
i Galeopterus_variegatus.GalVar_scaffold_266699          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     608961 20 -    660261 CACT--AAA-C-AC-GG-AG-AA--------T-TA--A---------------------------
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30810 24 +     49224 TATT--AAA-T-A--GG-AT-GA--------T-AA--A-ATG---A-T-----------------
i Glis_glis.GliGli_scaffold_19807                        I 2 I 13
s Gorilla_beringei.k141_3596273                              11340 29 -     32273 TACT--AAA-A-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186333488 29 + 186649187 TACT--AAa-a-gt-gg-aa-ga--------c-at--a-aag---a-t----taa---------t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   30530 24 +     78134 TATT--AAA-T-A--AG-AT-ga--------t-aa--a-atg---a-t-----------------
i Graphiurus_murinus.GraMur_scaffold_10447               I 2 I 13
s Hapalemur_alaotrensis.k141_170648                           2942 38 -     19426 TACT--AAA-T-GT-GG-AG-GA--------T-AA--A-AAG---A-T----TAATAAGATTAAT
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              8086 38 -     15286 TACT--AAA-T-GT-GG-AG-GA--------T-AA--A-AAG---A-T----TAATAAGATTAAT
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                              9724 38 +     18253 TACT--AAA-T-GT-GG-AG-GA--------T-AA--A-AAG---A-T----TAATAAGATTAAT
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                          9827 38 -     41752 tact--aaa-t-gt-gg-ag-ga--------t-aa--a-aag---a-t----taataagattaat
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                          9660 38 -     16460 tact--aaa-t-gt-gg-ag-ga--------t-aa--a-aag---a-t----taataagattaat
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238860 28 +    327341 TACT--A-A-T-TT-GG-AA-GA--------T-AA--A-AAT---A-T----AAA---------T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18165 20 +     36099 TACT--AAA-C-AT-GG-AG-AA--------T-TA--A---------------------------
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20660020 24 +  22651954 TACT--AAA-T-G--TG-AG-GTCC-----TC-CA-AA-G-------------------------
i Heterocephalus_glaber.JH602082.1                       I 7 I 4
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112518 29 +    128679 TACT--AAA-C-GT-GG-AG-TA--------T-AA--A-AAT---G-T----AAA---------T
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108765 31 +   1711038 tatt--aaa-a-gt-gg-ag-ga--------c-aaaaa-aat---a-t----aaa---------t
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               40206 30 +     43066 TAAT--AAA-A-GT-GG-AG-GA--------C-AA-AA-AAT---A-T----TAA---------T
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    430232 29 +    630532 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAT---A-C----TAA---------T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  41390 27 +     55795 -ACT--A-A-A-AG-AG-AA-GA--------T-AA--A-AAT---A-T----AAA---------T
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20513 31 -    143317 TACT--AAA-T-G--TG-AG-ATCC----TTC-AA--A-GAG---G-A---G--A---------T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 7 C 0
s Hylobates_agilis.k141_307679                               13164 29 -     15490 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAT---A-T----TAA---------T
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              55169 29 +     67168 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAT---A-T----TAA---------T
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189538819 29 - 191637585 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAT---A-T----TAA---------T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3331712 29 -  11177569 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAT---A-T----TAA---------T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      81591 32 +    135385 TGCT--AAA-T-A--TA-AG-CTTCCC---TC-AA--A-GAG---A-A---G--A---------T
i Hystrix_cristata.HysCri_scaffold_5660                  I 6 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7515063 19 -   7955117 cact--gaa-t-g--tg-ag-ga--------t-aa--a---------------------------
i Ictidomys_tridecemlineatus.JH393364.1                  I 2 I 15
s Indri_indri.k141_3655594                                   18643 38 +     31101 tact--aaa-t-gg-gg-aa-ga--------t-aa--a-aag---a-t----taataagattaat
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22922 29 +     23964 TACT--AAA-C-AT-GG-AA-CA--------T-AA--A-AAT---G-T----AAG---------T
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8272166 26 -   9596543 TACT--AAG-T-G-TGG-GT-GA--------C-AA--A-ATC---ATA-----------------
i Jaculus_jaculus.JH725527.1                             I 2 I 11
s Kogia_breviceps.KogBre_flattened_line_192630                2284 29 -      3359 TACT--AAA-C-GT-GG-AA-GA--------T-AA--A-AAT---G-T----AAG---------T
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lemur_catta.scaffold_24                                 15520186 39 -  30322482 tact--aaa-t-gt-gg-ag-ga--------ttaa--a-agg---a-t----taataagattaat
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          7098 38 -     23766 tact--aaa-t-gt-gg-ag-ga--------t-aa--a-aag---a-t----taataagattaat
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             25045 38 +     45836 tact--aaa-t-gt-gg-ag-ga--------t-aa--a-aag---a-t----taataagattaat
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31957 38 -     32627 tact--aaa-t-gt-gg-ag-ga--------t-aa--a-aag---a-t----taataagattaat
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      23100 38 +     54090 tact--aaa-t-gt-gg-aa-ga--------t-aa--a-aag---a-t----taataagattaat
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3039395 29 +   3914936 TACT--AAA-T-gt-gg-ag-aa--------t-aa--a-aat---a-t----aag---------t
i Leptonychotes_weddellii.KB714746.1                     C 0 I 18
s Lipotes_vexillifer.KE559953.1                             267974 29 -    662738 tact--aaa-c-gt-gg-aa-ga--------t-aa--a-gat---g-t----aag---------t
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1432588 29 +   1826925 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            1145 29 +     11245 TACG--AAA-T-GT-GA-AA-gg--------t-aa--a-aag---a-t----taa---------t
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                   999982 29 +   6120653 TACG--AAA-T-GT-GA-AA-gg--------t-aa--a-aag---a-t----taa---------t
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17952186 29 -  59628241 TATT--Aaa-t-gt-ga-ag-aa--------t-aa--a-aat---a-t----aaa---------t
i Lycaon_pictus.CM007581.1                               C 0 I 18
s Macaca_arctoides.k141_2326796                               2409 29 +     40492 TACT--AAA-T-GT-GG-AA-GA--------C-AT--G-AAG---A-T----TAA---------T
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59671664 29 +  60120075 TACT--AAA-T-GT-GG-AA-GA--------C-AT--G-AAG---A-T----TAA---------T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  8164 29 -     26193 TACT--AAA-T-GT-GG-AA-GA--------C-AT--G-AAG---A-T----TAA---------T
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75961 29 -    114318 TACT--AAA-T-GT-GG-AA-GA--------C-AT--G-AAG---A-T----TAA---------T
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  1676 29 -     23192 TACT--AAA-T-GT-GG-AA-GA--------C-AT--G-AAG---A-T----TAA---------T
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                11129 29 -     29190 TACT--AAA-T-GT-GG-AA-GA--------C-AT--G-AAG---A-T----TAA---------T
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  19696 29 +     37952 TACT--AAA-T-GT-GG-AA-GA--------C-AT--G-AAG---A-T----TAA---------T
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834784 29 + 187317192 TACT--AAA-T-GT-GG-AA-GA--------C-AT--G-AAG---A-T----TAA---------T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25453347 29 -  25927173 TACT--AAA-T-GT-GG-AA-GA--------C-AT--G-AAG---A-T----TAA---------T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  75545 29 +     89720 TACT--AAA-T-GT-GG-AA-GA--------C-AT--G-AAG---A-T----TAA---------T
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 2543 29 +     20474 TACT--AAA-T-GT-GG-AA-GA--------C-AT--G-AAG---A-T----TAA---------T
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   2344 29 -     14993 TACT--AAA-T-GT-GG-AA-GA--------C-AT--G-AAG---A-T----TAA---------T
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  325216 29 -    668171 TACT--AAA-T-GT-GG-AA-GA--------C-AT--G-AAG---A-T----TAA---------T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                  647 29 -     24072 TACT--AAA-T-GT-GG-AA-GA--------C-AT--G-AAG---A-T----TAA---------T
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               21283 29 -     45290 TACT--AAA-T-GT-GG-AA-GA--------C-AT--G-AAG---A-T----TAA---------T
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 87987 29 +     94391 cact--aag-t-gt-ag-ag-ga--------t-aa--a-aat---a-t----aaa---------t
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23932832 29 -  24302211 TACC--AAA-T-GT-GG-AA-GA--------C-AT--G-AAG---A-T----CAA---------T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               347009 29 +    752769 TACC--AAA-T-GT-GG-AA-GA--------C-AT--G-AAG---A-T----CAA---------T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              16070 33 +    737560 tact--aaa-t-gt-gg-ag-ga--------t-aa--a-aat---a-gatataaa---------t
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              47459 29 -    317179 tact--aaa-t-gt-gg-ag-ga--------t-aa--a-aat---a-g----ata---------t
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097913 19 -  40650429 tact--gaa-t-g--tg-ag-ga--------t-aa--a---------------------------
i Marmota_marmota.CZRN01000018.1                         I 2 I 15
s Megaderma_lyra.MegLyr_scaffold_4542                         7270 29 -    207569 TACC--AAA-T-GT-GA-AG-GA--------T-AA--A-AAT---A-C----AAA---------T
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              6959 29 +     13704 TACT--AAA-T-AT-AG-AG-AA--------T-AA--A-AAT---A-T----CAA---------T
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 17
s Meriones_unguiculatus.MerUng_scaffold_7390                 28055 26 +    140813 tact--aag-t-t-tag-ag-ga--------t-aa--a-ctg---act-----------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 13
s Mesocricetus_auratus.KB708134.1                         12178146 26 -  29670104 TACT--AAG-A-G-TTG-AG-GA--------T-AA--A-CTG---ACC-----------------
i Mesocricetus_auratus.KB708134.1                        C 0 I 13
s Mesoplodon_bidens.MesBid_scaffold_108144                    3590 29 +     10310 TACT--AAA-C-AT-GG-AA-GA--------T-AA--A-AAC---G-T----AAG---------T
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18287582 38 -  93316391 TACT--AAA-T-GT-GG-AG-GA--------T-AA--A-GAG---A-T----TAATAAGATTAAT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13897 29 -     19307 TACT--ACA-T-GT-TA-AG-TA--------T-AA--A-AAT---A-T----AAA---------T
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11256475 25 -  27267610 T-CT--AAG-T-G-TGG-AG-GG--------T-AA--A-CGT---ACT-----------------
i Microtus_ochrogaster.CM001695.1                        C 0 I 13
s Miopithecus_ogouensis.k141_534055                           4582 29 -     28506 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         2231 29 -      8324 TACT--AAA-T-AT-GG-AG-AA--------T-AA--A-ATT---A-T----AAA---------T
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 18
s Mirza_zaza.k141_952172                                      5150 38 -     37649 tact--aaa-t-gt-gg-ag-ga--------t-aa--a-gag---a-t----taataaggttaat
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    27095 29 -    437263 TACT--AAA-C-GT-GG-AA-GA--------T-AA--A-AAT---G-T----AAG---------T
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138300 28 -    366855 tact--aaa-t-gt-ta-ag-ta--------t-aa--a-aa----a-t----aaa---------t
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   1047 20 +     82753 TACT--AAA-C-AT-GG-AG-AA--------T-TA--A---------------------------
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   32092 28 +     37127 TACT--A-A-T-AT-GG-AA-GA--------C-AA--A-AAT---A-A----AAA---------T
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Mus_caroli.LT608237.1                                   84357117 17 - 120012414 --------G-T-G-TAA-AG-GA--------T-AA--A-CTA-----------------------
i Mus_caroli.LT608237.1                                  N 0 I 21
s Mus_musculus.chr8                                       87646090 17 - 129401213 --------g-t-g-tag-ag-ga--------t-aA--A-CTA-----------------------
i Mus_musculus.chr8                                      N 0 I 12
s Mus_spretus.CM004101.1                                  90748164 17 - 130317789 --------g-t-g-tag-ag-ga--------t-aA--A-CTA-----------------------
i Mus_spretus.CM004101.1                                 N 0 I 12
s Muscardinus_avellanarius.MusAve_scaffold_82313              2802 24 +     14296 TAGT--AAA-C-A--GG-AT-GT--------T-AA--A-ATA---A-T-----------------
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 2 I 13
s Mustela_putorius.JH418006.1                               298144 29 -  14710649 TACT--AAA-T-AT-gg-ag-aa--------t-aa--a-aat---a-t----caa---------t
i Mustela_putorius.JH418006.1                            C 0 I 18
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186587 29 +    196477 TATT--AAA-T-GT-GG-AG-GA--------C-AA--A-ATT---A-T----GTG---------T
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.AXCS01343547.1                             85 23 +       996 ---t--aaa-t-G-TAG-AG-GA--------C-AA--A-ATG---ACT-----------------
i Nannospalax_galili.AXCS01343547.1                      n 841 I 13
s Nasalis_larvatus.k141_413338                               10582 29 +     21681 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5866051 29 +   7148211 tact--aaa-t-gt-gg-aa-ga--------t-aa--a-aat---g-t----aag---------t
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756854 29 +    783361 tacc--aag-t-gt-ta-ag-ta--------t-aa--a-aat---a-t----aaa---------t
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146447 29 -   9404916 tatt--aaa-t-gt-ga-aa-aa--------t-aa--a-aat---a-t----aaa---------t
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 18
s Nycticebus_bengalensis.LG01                            102574963 29 - 196305487 tacg--aaa-c-gt-ga-aa-gg--------t-aa--a-aag---a-t----taa---------t
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2649 29 +      8486 TACG--AAA-C-GT-GA-AA-GG--------T-AA--A-AAG---A-T----TAA---------T
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105745390 29 + 199412804 TACG--AAA-C-GT-GA-AA-AG--------t-aa--a-aag---a-t----taa---------t
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1359102 30 +   3988456 TACC--TAA-TGT--GG-AG-GA--------T-AAGCA-AGA---T-T-----AA---------T
i Ochotona_princeps.JH802162.1                           I 2 C 0
s Odobenus_rosmarus.KB229312.1                              503537 29 -   2017862 tatt--aaa-t-at-gg-ag-aa--------t-aa--a-aat---a-t----aaa---------t
i Odobenus_rosmarus.KB229312.1                           C 0 I 18
s Odocoileus_virginianus.KZ100018.1                         145367 22 +    630418 TACTATAAA-C-AT-GG-AG-AA--------C-TA--A---------------------------
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          76878 20 -    150152 GACT--AAA-C-AT-GG-AG-AA--------T-TA--A---------------------------
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   16811 26 +     28053 CATT--GAG-T-G-TAG-AG-GA--------T-GA--A-CTT---ACT-----------------
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 13
s Onychomys_torridus.OnyTor_scaffold_2986                    74913 26 +    102263 tact--AAG-T-G-TAG-AG-GA--------T-AA--A-CTG---ACT-----------------
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 13
s Orcinus_orca.KB316932.1                                  2781966 29 -  10937097 tact--aaa-c-gt-gg-aa-ga--------t-aa--a-aat---g-t----aag---------t
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       459200 29 -    559221 TATT--Aaa-t-gt-ga-ag-aa--------t-aa--a-aat---a-t----aaa---------t
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 18
s Ovis_aries.CM001607.2                                   17586140 20 +  44047080 TACT--AAA-C-AT-GG-AG-AA--------T-TA--A---------------------------
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      174117 20 -    191736 TACT--AAA-C-AT-GG-AG-AA--------T-TA--A---------------------------
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    39457 29 +     80009 TACT--AAA-A-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189138350 29 + 189151597 TACT--AAA-A-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  147918 28 +    230217 TACT--A-A-T-AT-GG-AA-GA--------T-AA--A-AAT---A-T----AAA---------T
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                261125 28 +  18783137 TACT--A-A-T-at-gg-aa-ga--------t-aa--a-aat---a-t----aaa---------t
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4717762 28 -   8748460 TACT--A-A-T-at-gg-aa-ga--------t-aa--a-aat---a-t----aaa---------t
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1265034 20 -   2937107 TACT--AAA-C-AT-GG-AG-AA--------T-TA--A---------------------------
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183438617 29 + 183742232 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             2310 29 +     20448 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20559115 29 +  20919399 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   1053 29 +     41871 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     4339 29 +     27711 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  4424 29 +      9205 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9577 28 -     78924 TTCT--A-A-T-AT-GG-AG-AA--------T-AA--A-ATT---A-T----AAA---------T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            5137 29 +     13100 TACA--AAA-C-AT-GA-AA-GG--------T-AA--A-AAG---A-T----TAA---------T
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             3510 29 +     25941 TACA--AAA-C-AT-GA-AA-gg--------t-aa--a-aag---a-t----taa---------t
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18187699 26 -  18517816 tact--AAG-T-G-TAG-AG-GA--------T-AA--A-CTG---ACC-----------------
i Peromyscus_maniculatus.KI615324.1                      C 0 I 13
s Petromus_typicus.PetTyp_scaffold_42190                     26780 30 -     29689 TACT--AAA-T-G--TG-AG-ATCC-----TG-CA--A-CAG---A-A---A--A---------T
i Petromus_typicus.PetTyp_scaffold_42190                 I 7 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               9013 29 +     63832 tact--aaa-c-gt-gg-aa-ga--------t-aa--a-aat---g-t----aag---------t
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           39094 29 +     62158 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33816 29 +     89929 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            35232 29 +     51399 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14291468 29 -  14605196 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34719 29 +     35617 TACT--AAA-G-GT-GG-AA-GA--------T-AA--A-AAT---G-T----AAG---------T
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189126543 29 + 189387572 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAT---A-T----TAG---------T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9566149 29 +   9816681 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAT---A-T----TAG---------T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68743 29 -     81375 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                               564 29 +     19060 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2592839 38 -   4620579 TACT--AAA-T-GC-GG-Ag-ga--------t-aa--a-aag---a-t----taataagatTAAT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986852 38 +   2598838 TACT--AAA-T-GT-GG-AG-ga--------t-aa--a-aag---a-t----taataagatTAAT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          25141 38 +     38485 TACT--AAA-T-GT-GG-AG-GA--------T-AA--A-AAG---A-T----TAATAAGATTAAT
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             1300 38 +      4256 TACT--AAA-T-GT-GG-AG-GA--------T-AA--A-AAG---A-T----TAATAAGATTAAT
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22660 38 +     35766 tact--aaa-t-gt-gg-ag-ga--------t-aa--a-aag---a-t----taataagattaat
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            843 38 -     24134 TACT--AAA-T-GT-GG-AG-GA--------T-AA--A-AAG---A-T----TAATAAGATTAAT
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24655 38 -     67325 tact--aaa-t-gt-gg-ag-ga--------t-aa--a-aag---a-t----taataagattaat
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            900 38 -      6182 TACT--AAA-T-GT-GG-AG-GA--------T-AA--A-AAG---A-T----TAATAAGATTAAT
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             5690 26 -     21651 tact--AAG-T-T-TAG-AG-GA--------T-AA--A-CTG---ATT-----------------
i Psammomys_obesus.NESX01036370.1                        C 0 I 13
s Pteronotus_parnellii.KE909381.1                            11695 29 -     21811 TACT--AAA-T-GT-ta-ag-ta--------t-aa--a-aac---a-t----aaa---------t
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         37155 29 +     42204 TACT--AAA-T-AT-GG-AG-AA--------T-AA--A-AAT---A-T----CAA---------T
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 18
s Pteropus_alecto.KB030862.1                              22974160 29 +  28871421 CAct--aag-t-gt-gg-ag-ga--------t-ag--a-aat---a-t----aaa---------t
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                2098 29 -      8028 CAct--aag-t-gt-gg-ag-ga--------t-ag--a-aat---a-t----aaa---------t
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20271049 28 -  38429054 TACT--A-A-t-at-gg-aa-ga--------t-aa--a-aat---a-t----aaa---------t
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             10575 29 -     91421 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7604703 29 +   7812017 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10544 29 -     72585 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5615 22 +     55207 TACTATAAA-C-AT-GG-AG-AA--------C-TA--A---------------------------
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53565977 20 +  90668790 --------G-T-G-TAG-AA-GA--------T-AG--A-CTA---ACT-----------------
i Rattus_norvegicus.chr16                                n 98 I 22
s Rhinolophus_sinicus.LVEH01000134.1                        367310 29 -   3329780 tact--aaa-t-gt-gc-ag-ga--------t-aa--a-aat---a-t----aaa---------t
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             2259 29 -     11128 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91231614 29 - 195417433 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7667263 29 +   7961872 TATT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85144 29 -     96226 cact--aag-t-at-gg-ag-ga--------t-aa--a-aat---a-t----aaa---------t
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151845 29 -    313613 tatt--aaa-t-gt-gg-ag-aa--------t-ta--a-aat---t-ta-a-a-----------t
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          15087 29 -     19888 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      22289 29 +     39453 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2815 29 +     27826 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             2336 29 -     19483 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      2398 29 +      7198 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         10658 29 +     15514 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            188152 23 -    191337 TACT--AAA-T-GT-GA-AG-GG--------T-AG--A-AAT-----------------------
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 I 2
s Sorex_araneus.JH798187.1                                13648337 25 -  18376816 Tgct--aaa-a-at-ggaat-ta--------a-aa--a-aat---a-------------------
i Sorex_araneus.JH798187.1                               C 0 I 1
s Spermophilus_dauricus.KZ294078.1                         1948696 19 -   3870691 tact--gaa-t-g--tg-ag-ga--------t-aa--a---------------------------
i Spermophilus_dauricus.KZ294078.1                       I 2 I 15
s Spilogale_gracilis.SpiGra_flattened_line_13525             27691 23 +     97271 TACT--AAA-T-AC-GG-AG-AA--------T-AA--A-AAT-----------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 6
s Suricata_suricatta.SurSur_flattened_line_6629              14999 28 -    196729 TACT--A-A-T-AT-GG-AA-GA--------T-AA--A-AAT---A-A----AAA---------T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.JH118708.1                                      32217 29 -     47482 tact--aaa-t-gt-gg-ag-tg--------t-aa--a-aat---g-t----aaa---------t
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1088863 29 -   1523678 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAT---A-T----TAA---------T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 7299 29 +     41958 TACT--AAA-T-GT-GG-AG-GA--------T-AA--A-AAT---A-T----AAA---------T
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69941 29 +    116680 TATT--AAA-C-GT-GG-AG-GA--------C-AA--A-ATT---A-T----GTA---------T
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115692 29 -    156842 tact--aaa-t-tt-gg-ag-ga--------t-aa--a-aat---a-t----aaa---------t
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    384143 29 +    539355 tact--aaa-t-gt-gg-ag-ga--------t-aa--a-aat---a-t----aaa---------t
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               11121 28 +     70052 -aca--aaa-t-gt-gg-ag-aa--------c-aa--g-aag---a-t----taa---------t
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               15426 28 +     25099 -ACA--AAA-T-GT-GG-AG-AA--------C-AA--G-AAG---A-T----TAA---------T
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186423661 29 + 186847797 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103904 30 +    114563 TACT--AAA-T-G--TG-AG-ATCCC-----C-CA--A-CAG---A-A---A--A---------T
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 7 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   2504 29 +      8208 TACT--AAA-T-GT-GG-CA-GA--------T-AA--A-AAG---A-T----GTG---------T
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     79442 29 +    610378 tact--aca-t-gt-ta-ag-ta--------c-aa--a-aat---a-t----aaa---------t
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          6389 29 -     20410 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    10585 29 +     15221 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        6490 29 +     19930 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2920 29 -     19997 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            43039 29 -     60166 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        10512 29 -     27529 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     10452 29 -     18194 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           4187 29 -     21137 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2890 29 -     10723 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         2042 29 +      9834 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        20360 29 +     32220 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5934457 29 +   6242583 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        3704 29 +     20839 TACT--AAA-T-GT-GG-AA-GA--------C-AT--A-AAG---A-T----TAA---------T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_124071                   1696 28 -      2171 TACT--AAA-C-AT-GG-AG-GA--------TTAA--A-T-----G-T----AAA---------C
i Tragulus_javanicus.TraJav_scaffold_124071              I 139 I 196
s Tupaia_chinensis.KB320699.1                              2150883 29 +   4065304 tagt--aaa-t-at-gg-aa-ga--------t-ac--a-aag---a-t----taa---------t
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     4181 29 -     10553 TAAT--AAA-T-GT-GG-AA-GA--------T-AC--A-AAG---A-T----TAA---------G
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15738213 29 +  33153633 tact--aaa-c-gt-gg-aa-ga--------t-aa--a-aat---g-t----aag---------t
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   52032 29 -     77625 tact--aca-t-gt-gg-aa-aa--------t-aa--a-aat---a-aa-a-a-----------t
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4847399 29 -   5085361 TACT--ACA-T-at-gg-ag-aa--------t-aa--a-aat---a-t----aaa---------t
i Ursus_maritimus.KK499267.1                             C 0 I 18
s Varecia_rubra.k141_590885                                   7527 38 +     50397 TACT--AAA-T-GT-GG-AG-GA--------T-AA--A-AAG---A-T----TAATAAGATTAAT
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              7575 38 +     24756 TACT--AAA-T-GT-GG-AG-GA--------T-AA--A-AAG---A-T----TAATAAGATTAAT
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368871 19 -   5488506 tact--gac-t-gt-gg-ag-ga--------t-aa------------------------------
i Vicugna_pacos.KN270157.1                               C 0 I 9
s Vulpes_lagopus.VulLag_flattened_line_30954                  7861 20 -     43706 TATT--AAA-T-GT-GA-AG-AA--------T-AA--A---------------------------
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 27
s Xerus_inauris.XerIna_scaffold_48378                        20205 19 -     24430 TACT--AAA-T-G--TA-AG-GA--------A-AA--A---------------------------
i Xerus_inauris.XerIna_scaffold_48378                    I 2 I 15
s Zalophus_californianus.ZalCal_flattened_line_17732          2107 23 +     86975 TATT--AAA-T-AT-GG-AG-AA--------T-AA--A-AAT-----------------------
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 24
s Zapus_hudsonius.ZapHud_scaffold_11398                      11182 10 +     63895 ------------------AA-AA--------C-GG--A-AT------------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 1 I 12
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11905 29 +     12536 TACT--AAA-C-GT-GG-AA-GA--------T-AA--A-AAC---A-T----AAG---------T
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       2134 19 +     62944 GTGA-TTCAG-----TCTC----TGCCC--A
s Acinonyx_jubatus.LLWD01001279.1                           824072 19 -   1699592 gtga-tttaG-----TCCC----CACCC--A
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     66558  9 +     87051 ----------------CCC----AGTCC--C
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 13 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507531 19 -  29979442 atga-tttag-----TTGC----CAACC--A
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 18 C 0
s Ailurus_fulgens.LNAC01001112.1                             76314 19 -    347723 gtga-ttCAG-----CTGC----CAACC--A
i Ailurus_fulgens.LNAC01001112.1                         I 226 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     65839  9 -     89534 ----------------GTC----TGCCT--A
i Allactaga_bullata.AllBul_scaffold_9566                 I 12 C 0
s Allenopithecus_nigroviridis.k141_3361533                   10113 19 -     52922 GTGA-TTCAG-----TCTC----TGAAC--A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         10044 19 -     28001 GTGA-TTCAG-----TCTC----TGACC--A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                           490 19 -     18505 GTGA-TTCAG-----TCTC----TGACC--A
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           1339 19 -     12518 GTGA-TTCAG-----TCTC----TGACC--A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675863 16 -   2318259 ---A-TTCAG-----TTCC----CACCC--A
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 4
s Anoura_caudifer.AnoCau_scaffold_1412                      183609 19 +    412891 gtga-ttcag-----tccc----aggcc--a
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             98345 15 -    100397 ---A-TTCAG-----TTC-----CACCC--A
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 I 4
s Aplodontia_rufa.AprRuf_scaffold_68852                       7763  9 +     20879 ----------------CTC----CGCTC--A
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 13 C 0
s Arctocebus_calabarensis.k141_288239                        14930 19 +     17124 GTGA-TTTAA-----TCCC----TGCCC--A
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3020 19 +     43469 GTGA-TTCAG-----CCCC----AGGCC--A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  49819 19 -     92717 gtga-ttcag-----tcct----taccc--a
i Avahi_laniger.k141_765380                              C 0 I 17
s Avahi_peyrierasi.k141_1424874                              50444 19 +     85213 gtga-ttcag-----tcct----taccc--a
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15192099 19 +  23207421 gtga-ttcag-----ttcc----cacct--g
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2564 19 -     18090 gtga-ttcag-----ttcc----cacct--g
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26785 16 +     34529 ---A-TTAAG-----TTCC----CACCC--A
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 4
s Bison_bison.KN261452.1                                    199842 16 -    288883 ---A-TTCAG-----TTCC----CACCC--A
i Bison_bison.KN261452.1                                 C 0 I 4
s Bos_indicus.CM003047.1                                  20273047 16 +  48749331 ---A-TTCAG-----TTCC----CACCC--A
i Bos_indicus.CM003047.1                                 C 0 I 4
s Bos_mutus.JH880303.1                                     1125603 16 -   1948126 ---A-TTCAG-----TTCC----CACCC--A
i Bos_mutus.JH880303.1                                   C 0 I 4
s Bos_taurus.CM000203.6                                   18083685 16 +  45695690 ---A-TTCAG-----TTCC----CACCC--A
i Bos_taurus.CM000203.6                                  C 0 I 4
s Bubalus_bubalis.KI419123.1                               2819352 16 +   4408762 ---A-TTCAG-----TTCC----CACCC--A
i Bubalus_bubalis.KI419123.1                             C 0 I 4
s Camelus_bactrianus.KN276810.1                            9999409 19 -  17673402 GTGA-CTCAG-----TTCC----CACCC--T
i Camelus_bactrianus.KN276810.1                          I 9 C 0
s Camelus_dromedarius.KN272107.1                           2331873 19 -   7040546 GTGA-CTCAG-----TTCC----CACCC--T
i Camelus_dromedarius.KN272107.1                         I 9 C 0
s Camelus_ferus.KB017975.1                                  400149 19 -   1652518 GTGA-CTCAG-----TTCC----CACCC--T
i Camelus_ferus.KB017975.1                               I 9 C 0
s CanFam4.chr16                                           17796285 19 -  60362399 GTGA-TTGAG-----TTGC----CAACC--A
i CanFam4.chr16                                          I 18 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182342 19 -    185531 GTGA-TTGAG-----TTGC----CAACC--A
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 18 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031728 19 -   9314153 gtga-ttGAG-----TTGC----CAACC--A
i Canis_lupus_dingo.QKWQ01000480.1                       I 18 C 0
s Canis_lupus_familiaris.chr16                            17955993 19 -  59632846 gtga-ttGAG-----TTGC----CAACC--A
i Canis_lupus_familiaris.chr16                           I 18 C 0
s Canis_lupus_orion.HG994398.1                            18497293 19 +  63665305 gtga-ttGAG-----TTGC----CAACC--A
i Canis_lupus_orion.HG994398.1                           I 18 C 0
s Capra_aegagrus.CM003241.1                               18829981 16 +  46296322 ---A-TTCAG-----TTCC----CACCC--A
i Capra_aegagrus.CM003241.1                              C 0 I 4
s Capra_hircus.CM004588.1                                 18060701 16 -  44709034 ---A-TTCAG-----TTCC----CACCC--A
i Capra_hircus.CM004588.1                                C 0 I 4
s Carlito_syrichta.NW_007259797.1                           141536 19 -    496798 gtga-tttAC-----TCCC----TGCCC--C
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                3383 19 -     11696 gtga-ttcag-----tccc----agccc--a
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    134320  9 +    179628 ----------------TTC----TGCCC--A
i Castor_canadensis.CasCan_scaffold_2074                 I 13 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89753 19 +    217609 caga-ttcag-----ttcc----caccc--a
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18348154  3 -  23392119 ggg----------------------------
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18360414  3 -  23407841 GGG----------------------------
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                        99288  3 +    143979 GGG----------------------------
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         5451 19 -      8605 GTGA-TTTAT-----TCCC----TGCCC--A
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12228386 19 +  27778364 gtga-ttcag-----tctc----tgccc--c
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          3104 19 -      3715 GTGA-TTCAG-----TCTC----TGCCC--C
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4471073 19 +   4669795 GTGA-TTCAG-----TCTC----TGACC--A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         9622 19 -     19203 GTGA-TTCAG-----TCTC----TGACC--A
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           4043 19 +      8260 GTGA-TTCAG-----TCTC----TGACC--A
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           4271 19 +     27781 GTGA-TTCAG-----TCTC----TGACC--A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         4429 19 -     20310 GTGA-TTCAG-----TCTC----TGACC--A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           7413 19 +     29689 GTGA-TTCAG-----TCTC----TGACC--A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            1849 19 +      9989 GTGA-TTCAG-----TCTC----TGAAC--A
i Cercopithecus_diana.k141_2427854                       I 9 C 0
s Cercopithecus_hamlyni.k141_187466                          10097 19 -     27936 GTGA-TTCAG-----TCTC----TGACC--A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                            10123 19 -     11289 GTGA-TTCAG-----TCTC----TGACC--A
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38812495 19 +  39242232 GTGA-TTCAG-----TCTC----TGACC--A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21218194 19 -  21565898 GTGA-TTCAG-----TCTC----TGACC--A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       35313 19 -     53127 GTGA-TTCAG-----TCTC----TGACC--A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        2598 19 +      7159 GTGA-TTCAG-----TCTC----TGACC--A
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       10116 19 -     27947 GTGA-TTCAG-----TCTC----TGACC--A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         10092 19 +     17596 GTGA-TTCAG-----TCTC----TGACC--A
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         40593 19 -     41420 GTGA-TTCAG-----TCTC----TGACC--A
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            5372 17 -      6351 --ga-ttcag-----tccc----tgccc--a
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             17235 19 -     52598 gtga-ttcag-----tccc----tgccc--a
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12585 19 +     57038 gtga-ttcag-----tccc----tgccc--a
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1251495  3 +   2543920 GGG----------------------------
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18424055 19 -  18827391 GTGA-TTCAG-----TCTC----TGACC--A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       10496 19 -     50209 GTGA-TTCAG-----TCTC----TGACC--A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135417504 19 + 135778131 GTGA-TTCAG-----TCTC----TGACC--A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15666 17 +     19366 --GA-CTCAG-----TCCC----TGCCC--A
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170765 17 +    839153 --ga-cccag-----tccc----tgccc--a
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1906011 19 +   2368649 GTGA-TTCAG-----TCTC----TGACC--A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199945680 19 + 200372422 GTGA-TTCAG-----TCTC----TGACC--A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              32552 19 +     84244 GTGA-TTCAG-----TCTC----TGACC--A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17546821 16 -  53390261 atca-ttcag-----tgac----tga-----
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          11018 19 -     20389 GCGA-CTTGG-----TCTC----AGCCC--A
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 46803  9 +     63868 ----------------CTC----AGTCC--A
i Cricetomys_gambianus.CriGam_scaffold_18520             I 12 C 0
s Cricetulus_griseus.LT883664.1                           11663791  9 + 224834208 ----------------CTC----AGTCC--C
i Cricetulus_griseus.LT883664.1                          I 13 C 0
s Crocidura_indochinensis.CroInd_scaffold_419916               120 19 +      2842 GTGA-CTCAG-----TCTT----TTCCC--A
i Crocidura_indochinensis.CroInd_scaffold_419916         n 58 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24965 19 -     87169 GTGA-TTTAG-----TCTC----TATCC--A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_231100                 3566  3 +      5455 GGG----------------------------
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_206793            1920  3 +      3576 GGG----------------------------
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            61643 17 +   2246927 --ga-ttcag-----gccc----tgccc--a
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12533397 19 -  12879189 gtga-ttcag-----tccc----tgccc--a
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811734 19 +  35494412 gtga-ttcag-----ttcc----cacct--g
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8628413 19 +  20541912 gtga-ttcAG-----TCCC----AGGCC--A
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  670239 19 +   1390856 gtga-ttcag-----tctc----tgccc--c
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    2994 19 +    198055 gtga-ttcag-----tctc----tgccc--c
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    35081  3 +     67921 GCA----------------------------
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 32172  3 -     42551 GGG----------------------------
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE759718.1                                   7919 19 +     11740 gaga-ttcag-----tccc----aaccc--a
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       311016 16 +    607251 ---A-TTCAG-----TTCC----CACCC--A
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 4
s Ellobius_lutescens.LOEQ01008920.1                          12597  9 -    110024 ----------------ctc----agtcc--c
i Ellobius_lutescens.LOEQ01008920.1                      I 13 C 0
s Ellobius_talpinus.LOJH01123422.1                            3547  9 +      5358 ----------------ctc----agtcc--c
i Ellobius_talpinus.LOJH01123422.1                       I 13 C 0
s Enhydra_lutris.KZ291758.1                               16326294 18 -  41312741 gtgA-TTCAG-----T-GC----CAACC--A
i Enhydra_lutris.KZ291758.1                              I 18 C 0
s Equus_asinus.JREZ01000139.1                              1280277 19 +   4378816 gtga-tgcag-----tctc----cgccc--a
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18528098 19 -  39960074 gtga-tgcag-----tctc----cgccc--a
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               30113 19 +    498745 gtga-tgcag-----tctc----cgccc--a
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3326574 26 -   7059049 CTGA-TTCAAGTTGTTCCC----TGCCTCCA
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21200686 19 -  21539334 GTGA-TTCAG-----TCTC----TGACC--A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11410 19 +    133382 gtga-ttcag-----ttcc----cacct--g
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             25347 19 -     44125 gtga-ttcag-----ttcc----cacct--g
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Eulemur_albifrons.k141_342033                               9916 19 -     14127 GTGA-TTCAG-----TCCC----TGCCC--A
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                2614 19 -     16928 GTGA-TTCAG-----TCCC----TGCCC--A
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              11647 19 -     25546 ATGA-TTCAG-----CCCC----TGCCC--A
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             8832 19 +     26330 GTGA-TTCAG-----CCCC----TGCCC--A
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 10089 19 +     23973 GTGA-TTCAG-----TCCC----TGCCC--A
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 8832 19 +     75513 gtga-ttcag-----cccc----tgccc--a
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  6784 19 +     97555 gtga-ttcag-----tccc----tgccc--a
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                             9710 19 +     26496 gtga-ttcag-----tccc----tgccc--a
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                   316 19 -     17153 GTGA-TTCAG-----TCCC----TGCCC--A
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                               9895 19 +    111500 gtga-ttcag-----tccc----tgccc--a
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20233932 19 + 206538554 gtga-tttAG-----TCCC----CACCC--A
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20192779 19 + 205367284 ttga-tttaG-----TCCC----CACCC--A
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  6292 19 -     36744 GTGA-TTTAG-----TCCC----CACCC--A
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galagoides_demidoff.k141_31856                              3245 20 -      3432 ctaagcctaa-----accc----agcag--a
i Galagoides_demidoff.k141_31856                         C 0 I 2
s Galeopterus_variegatus.GalVar_scaffold_266699                107 19 +      2098 gtga-ttcag-----tcac----tgccc--a
i Galeopterus_variegatus.GalVar_scaffold_266699          C 0 I 23
s Giraffa_tippelskirchi.LVKQ01S007888.1                     608981 16 -    660261 ---A-TTCAG-----TTCC----CACCC--A
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 I 4
s Glis_glis.GliGli_scaffold_19807                            30847  9 +     49224 ----------------CCC----TGCAC--A
i Glis_glis.GliGli_scaffold_19807                        I 13 C 0
s Gorilla_beringei.k141_3596273                              11369 19 -     32273 GTGA-TTCAG-----TCTC----TGCCC--A
i Gorilla_beringei.k141_3596273                          C 0 I 45
s Gorilla_gorilla.LT578341.1                             186333517 19 + 186649187 gtga-ttcag-----tctc----tgccc--a
i Gorilla_gorilla.LT578341.1                             C 0 I 45
s Graphiurus_murinus.GraMur_scaffold_10447                   30567  9 +     78134 ----------------ccc----tgccc--a
i Graphiurus_murinus.GraMur_scaffold_10447               I 13 C 0
s Hapalemur_alaotrensis.k141_170648                           2980 19 -     19426 GTGA-TTCAG-----TCCC----TGCCC--G
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              8124 19 -     15286 GTGA-TTCAG-----TCCC----TGCCC--G
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                              9762 19 +     18253 GTGA-TTCAG-----TCCC----TGCCC--G
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                          9865 19 -     41752 gtga-ttcag-----tccc----tgccc--a
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                          9698 19 -     16460 gtga-ttcag-----tccc----tgccc--g
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               238888 19 +    327341 GTGA-TTTAG-----TTTC----CATGG--A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 159
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18185 16 +     36099 ---A-TTCAG-----GTCC----CACCC--A
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 I 4
s Heterocephalus_glaber.JH602082.1                        20660048  3 +  22651954 GGG----------------------------
i Heterocephalus_glaber.JH602082.1                       I 4 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112547 19 +    128679 GTGA-TTTGG-----TTCC----CACCC--A
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108796 19 +   1711038 gtga-ctcag-----tccc----agccc--a
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               40236 19 +     43066 GTGA-CTCAG-----TCCC----AGCCC--A
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 I 11
s Hoolock_leuconedys.ctg274                                    430261 19 +    630532 GTGA-TTCAG-----TCTC----TGCCC--A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  41417 19 +     55795 GTGA-TATAG-----TCTC----CACCC--A
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20544  3 -    143317 GGA----------------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_307679                               13193 19 -     15490 GTGA-TTCAG-----TCTC----TGCCC--A
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              55198 19 +     67168 GTGA-TTCAG-----TCTC----TGCCC--G
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189538848 19 - 191637585 GTGA-TTCAG-----TCTC----TGCCC--A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3331741 19 -  11177569 GTGA-TTCAG-----TCTC----TGCCC--A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7515097  9 -   7955117 ----------------ccc----tgccc--t
i Ictidomys_tridecemlineatus.JH393364.1                  I 15 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      81623  3 +    135385 GGA----------------------------
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Indri_indri.k141_3655594                                   18681 19 +     31101 gtga-ttcag-----tccc----tgccc--a
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22951 19 +     23964 GTGA-TTCAG-----TTCC----CACCT--G
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8272203  9 -   9596543 ----------------GTC----TACCT--G
i Jaculus_jaculus.JH725527.1                             I 11 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                2313 19 -      3359 GTGA-TTCAG-----TTCC----CACCT--G
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 I 10
s Lemur_catta.scaffold_24                                 15520225 19 -  30322482 gtga-ttcag-----tccc----tgccc--a
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          7136 19 -     23766 gtga-ttcag-----tccc----tgccc--a
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             25083 19 +     45836 gtga-ttcag-----tccc----tgccc--a
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         31995 19 -     32627 gtga-ttcag-----tccc----tgccc--a
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      23138 19 +     54090 gtga-ttcag-----tccc----tgccc--a
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3039442 19 +   3914936 atga-ttcAG-----TTGT----CAACC--A
i Leptonychotes_weddellii.KB714746.1                     I 18 C 0
s Lipotes_vexillifer.KE559953.1                             268003 19 -    662738 gtga-ttcag-----ttcc----cacct--g
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1432617 19 +   1826925 GTGA-TTCAG-----TCTC----TGACC--A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            1174 19 +     11245 gtga-tttaa-----tccc----tgccc--a
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1000011 19 +   6120653 gtga-tttaa-----tccc----tgccc--a
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17952233 19 -  59628241 gtga-tTGAG-----TTGC----CAACC--A
i Lycaon_pictus.CM007581.1                               I 18 C 0
s Macaca_arctoides.k141_2326796                               2438 19 +     40492 GTGA-TTCAG-----TCTC----TGACC--A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59671693 19 +  60120075 GTGA-TTCAG-----TCTC----TGACC--A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  8193 19 -     26193 GTGA-TTCAG-----TCTC----TGACC--A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            75990 19 -    114318 GTGA-TTCAG-----TCTC----TGACC--A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  1705 19 -     23192 GTGA-TTCAG-----TCTC----TGACC--A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                11158 19 -     29190 GTGA-TTCAG-----TCTC----TGACC--A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  19725 19 +     37952 GTGA-TTCAG-----TCTC----TGACC--A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834813 19 + 187317192 GTGA-TTCAG-----TCTC----TGACC--A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25453376 19 -  25927173 GTGA-TTCAG-----TCTC----TGACC--A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  75574 19 +     89720 GTGA-TTCAG-----TCTC----TGACC--A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 2572 19 +     20474 GTGA-TTCAG-----TCTC----TGACC--A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   2373 19 -     14993 GTGA-TTCAG-----TCTC----TGACC--A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  325245 19 -    668171 GTGA-TTCAG-----TCTC----TGACC--A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                  676 19 -     24072 GTGA-TTCAG-----TCTC----TGACC--A
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               21312 19 -     45290 GTGA-TTCAG-----TCTC----TGACC--A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88016 19 +     94391 ggga-ttcag-----tccc----agccc--a
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23932861 19 -  24302211 GTGA-TTCAG-----TCTC----TGACC--A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               347038 19 +    752769 GTGA-TTCAG-----TCTC----TGACC--A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              16103 19 +    737560 gtga-tttag-----tcct----tgccc--a
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              47488 19 -    317179 gtga-ttcag-----tcct----tgccc--a
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097947  9 -  40650429 ----------------ccc----tgccc--t
i Marmota_marmota.CZRN01000018.1                         I 15 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         7299 19 -    207569 GTGA-TTTCA-----ACTC----AGCCC--A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              7005 18 +     13704 GTGA-TTCAG-----T-GC----CAACC--A
i Mellivora_capensis.MelCap_flattened_line_69365         I 17 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 28094  9 +    140813 ----------------CAA----AGTCC--C
i Meriones_unguiculatus.MerUng_scaffold_7390             I 13 C 0
s Mesocricetus_auratus.KB708134.1                         12178185  9 -  29670104 ----------------CTC----AGTCT--C
i Mesocricetus_auratus.KB708134.1                        I 13 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3619 19 +     10310 GTGA-TTCAG-----TTCC----CACCT--G
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18287620 19 -  93316391 GTGA-TTCAG-----TCCC----TGCCC--A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13926 19 -     19307 GTGA-TTCAG-----TCCC----AGGCC--A
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11256513  9 -  27267610 ----------------CTC----AGTCC--A
i Microtus_ochrogaster.CM001695.1                        I 13 C 0
s Miopithecus_ogouensis.k141_534055                           4611 19 -     28506 GTGA-TTCAG-----TCTC----TGACC--A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         2278 19 -      8324 ATGA-TTCAG-----TTGT----CAACA--A
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 18 C 0
s Mirza_zaza.k141_952172                                      5188 19 -     37649 gtga-ttcag-----tccc----tgccc--a
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    27124 19 -    437263 GTGA-TTCAG-----TTCC----CACCT--G
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138328 19 -    366855 gtga-ttcag-----tccc----aggcc--a
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   1067 16 +     82753 ---A-TTCAG-----TTCC----CATCC--A
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 4
s Mungos_mungo.MunMun_flattened_line_23663                   32120 19 +     37127 GTGA-TTTAG-----TCTC----TGTCC--A
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Mus_caroli.LT608231.1                                   16085581  9 + 120003353 ----------------CTC----AGTCC--C
i Mus_caroli.LT608231.1                                  n 21 I 61
s Mus_musculus.chr8                                       87646119  9 - 129401213 ----------------CTC----AGCCC--C
i Mus_musculus.chr8                                      I 12 C 0
s Mus_spretus.CM004101.1                                  90748193  9 - 130317789 ----------------CTC----AGCCC--C
i Mus_spretus.CM004101.1                                 I 12 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2839  9 +     14296 ----------------CTT----TGCAC--A
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 13 C 0
s Mustela_putorius.JH418006.1                               298191 18 -  14710649 gtgA-TTCAG-----T-GC----CAACC--A
i Mustela_putorius.JH418006.1                            I 18 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186616 17 +    196477 --AA-TTCAG-----GCCC----TGCTT--A
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.AXCS01343547.1                            121  9 +       996 ----------------GCT----GTCCC--T
i Nannospalax_galili.AXCS01343547.1                      I 13 I 20
s Nasalis_larvatus.k141_413338                               10611 19 +     21681 GTGA-TTCAG-----TCTG----TGACC--A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5866080 19 +   7148211 gtga-ttcag-----ttcc----cacct--g
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756883 19 +    783361 gtga-ttcag-----tcgt----aggcc--a
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146494 19 -   9404916 gtga-ttGAG-----TTGC----CAACC--A
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 18 C 0
s Nycticebus_bengalensis.LG01                            102574992 19 - 196305487 gtga-tttaa-----tccc----tgccc--a
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2678 19 +      8486 GTGA-TTTAA-----TCCC----TGCCC--A
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105745419 19 + 199412804 gtga-tttaa-----tccc----tgccc--a
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1359132 19 +   3988456 TTGA-CTCAT-----TCCC----TATCC--A
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              503584 19 -   2017862 gtga-ttCAG-----TTGT----CAACC--A
i Odobenus_rosmarus.KB229312.1                           I 18 C 0
s Odocoileus_virginianus.KZ100018.1                         145389 16 +    630418 ---A-TTCAG-----TTCC----CACCC--A
i Odocoileus_virginianus.KZ100018.1                      C 0 I 4
s Okapia_johnstoni.LVCL01S0005463.1                          76898 16 -    150152 ---A-TTCAG-----TTCC----CACCC--A
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 4
s Ondatra_zibethicus.OndZib_scaffold_46174                   16850  9 +     28053 ----------------CTC----AGTCC--C
i Ondatra_zibethicus.OndZib_scaffold_46174               I 13 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    74952  9 +    102263 ----------------CTC----GGTCC--C
i Onychomys_torridus.OnyTor_scaffold_2986                I 13 C 0
s Orcinus_orca.KB316932.1                                  2781995 19 -  10937097 gtga-ttcag-----ttcc----cacct--g
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       459247 19 -    559221 gtga-ttGAG-----TTGC----CAACC--A
i Otocyon_megalotis.JAEUCK010005147.1                    I 18 C 0
s Ovis_aries.CM001607.2                                   17586160 16 +  44047080 ---A-TTCAG-----TTCC----CACCC--A
i Ovis_aries.CM001607.2                                  C 0 I 4
s Ovis_canadensis.OviCan_scaffold_2572                      174137 16 -    191736 ---A-TTCAG-----TTCC----CACCC--A
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 I 4
s Pan_paniscus.KQ411613.1                                    39486 19 +     80009 GTGA-TTCAG-----TCTC----TGCCC--A
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189138379 19 + 189151597 GTGA-Ttcag-----tctc----tgccc--a
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  147946 19 +    230217 GTGA-TTTAG-----TCCC----CACCC--A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                261153 19 +  18783137 gtga-tttaG-----TCCC----CACCC--A
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4717790 19 -   8748460 gtga-tttaG-----TCCC----CACCC--A
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1265054 16 -   2937107 ---A-TTCAG-----TTCC----CACCC--A
i Pantholops_hodgsonii.KE114653.1                        C 0 I 4
s Papio_anubis.CM001495.2                                183438646 19 + 183742232 GTGA-TTCAG-----TCTC----TGACC--A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             2339 19 +     20448 GTGA-TTCAG-----TCTC----TGACC--A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20559144 19 +  20919399 GTGA-TTCAG-----TCTC----TGACC--A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   1082 19 +     41871 GTGA-TTCAG-----TCTC----TGACC--A
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     4368 19 +     27711 GTGA-TTCAG-----TCTC----TGACC--A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  4453 19 +      9205 GTGA-TTCAG-----TCTC----TGACC--A
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9605 19 -     78924 GTGA-TTTAG-----TTCC----CGCCC--A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 13
s Perodicticus_ibeanus.k141_855320                            5166 19 +     13100 GTGA-TTTAA-----TCCC----TGCCC--A
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             3539 19 +     25941 gtga-tttaa-----tccc----tgccc--a
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18187738  9 -  18517816 ----------------ATC----AGTCC--C
i Peromyscus_maniculatus.KI615324.1                      I 13 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     26810  3 -     29689 GGG----------------------------
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               9042 19 +     63832 gtga-ttcag-----ttcc----cacct--g
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           39123 19 +     62158 GTGA-TTCAG-----TCTC----TGACC--A
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33845 19 +     89929 GTGA-TTCAG-----TCTC----TGACC--A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            35261 19 +     51399 GTGA-TTCAG-----TCTC----TGACC--A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14291497 19 -  14605196 GTGA-TTCAG-----TCTC----TGACC--A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34748 19 +     35617 CTGA-TTCAG-----TTCC----CACCT--G
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189126572 18 + 189387572 GTGA-TTCAG-----TCTC-----GCCT--G
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9566178 18 +   9816681 GTGA-TTCAG-----TCTC-----GCCT--G
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68772 19 -     81375 GTGA-TTCAG-----TCTC----TGACC--A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                               593 19 +     19060 GTGA-TTCAG-----TCTC----TGACC--A
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2592877 19 -   4620579 GTGA-TTCAG-----TCCC----TGCCC--A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986890 19 +   2598838 GTGA-TTCAG-----TCCT----TGCGC--A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          25179 19 +     38485 GTGA-TTCAG-----TCCT----TGCGC--A
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             1338 19 +      4256 GTGA-TTCAG-----TCCT----TGCCC--A
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22698 19 +     35766 gtga-ttcag-----tcct----tgccc--a
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            881 19 -     24134 GTGA-TTCAG-----TCCT----TGCCC--A
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24693 19 -     67325 gtga-ttcag-----tcct----tgccc--a
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            938 19 -      6182 GTGA-TTCAG-----TCCT----TGCGC--A
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             5729  9 -     21651 ----------------CAA----AGTCC--C
i Psammomys_obesus.NESX01036370.1                        I 13 C 0
s Pteronotus_parnellii.KE909381.1                            11724 19 -     21811 gtgg-ttCAG-----TATC----AGGCT--G
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         37202 18 +     42204 GTGA-TTCAG-----T-GC----CAACC--A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 18 C 0
s Pteropus_alecto.KB030862.1                              22974189 19 +  28871421 ggga-ttcag-----tccc----agctc--a
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                2127 19 -      8028 ggga-ttcag-----tccc----agctc--a
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20271077 19 -  38429054 gtga-tttaG-----TCCC----CACCC--A
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             10604 19 -     91421 GTGA-TTCAG-----TCTC----TGACC--A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7604732 19 +   7812017 GTGA-TTCAG-----TCTC----TGACC--A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10573 19 -     72585 GTGA-TTCAG-----TCTC----TGACC--A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5637 16 +     55207 ---A-TTCAG-----TTCC----CACCC--A
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 4
s Rattus_norvegicus.chr8                                  20366517  9 + 133307652 ----------------CTC----AGTTC--C
i Rattus_norvegicus.chr8                                 I 90 n 22
s Rhinolophus_sinicus.LVEH01000134.1                        367339 19 -   3329780 gtga-ctcag-----tccc----aaccc--a
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             2288 19 -     11128 GTGA-TTCAG-----TCTC----TGACC--A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91231643 19 - 195417433 GTGA-TTCAG-----TCTC----TGACC--A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7667292 19 +   7961872 GTGA-TTCAG-----TCTC----TGACC--A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85173 19 -     96226 gaga-ttcag-----tccc----agatc--a
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151874 19 -    313613 atca-ttcag-----tccc----tgccc--a
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          15116 19 -     19888 GTGA-TTCAG-----TCTC----TGACC--A
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      22318 19 +     39453 GTGA-TTCAG-----TCTC----TGACC--A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2844 19 +     27826 GTGA-TTCAG-----TCTC----TGACC--A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             2365 19 -     19483 GTGA-TTCAG-----TCTC----TGACC--A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      2427 19 +      7198 GTGA-TTCAG-----TCTC----TGACC--A
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         10687 19 +     15514 GTGA-TTCAG-----TCTC----TGACC--A
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            188177 19 -    191337 ATGG-TTTAG-----TCCC----CGCCT--A
i Solenodon_paradoxus.SolPar_flattened_line_5840         I 2 C 0
s Sorex_araneus.JH798187.1                                13648363 23 -  18376816 tttt-gtgaG-----TCCATGTTTGCCC--A
i Sorex_araneus.JH798187.1                               I 1 C 0
s Spermophilus_dauricus.KZ294078.1                         1948730  9 -   3870691 ----------------ccc----tgccc--t
i Spermophilus_dauricus.KZ294078.1                       I 15 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27720 19 +     97271 GTGA-TTCGG-----TGGC----CAAAC--A
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 6 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              15027 19 -    196729 GTGA-TTTAG-----TCTC----CATCC--A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.JH118708.1                                      32246 19 -     47482 caga-ttcaa-----atcc----caccc--a
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1088892 19 -   1523678 GTGA-TTCAG-----TCTC----TGCCC--A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 7328  8 +     41958 GTGA-TTCA----------------------
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 5
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69970 17 +    116680 --AA-TTCAG-----GCCC----TGCTC--A
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115721 19 -    156842 gtga-ttcag-----tctc----tgccc--a
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    384172 19 +    539355 gtga-ttcag-----tctc----tgccc--a
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               11149 19 +     70052 gtga-tttat-----tccc----tgccc--a
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               15454 19 +     25099 GTGA-TTTAT-----TCCC----TGCCC--A
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186423690 19 + 186847797 GTGA-TTCAG-----TCTC----TGACC--A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103934  3 +    114563 GGG----------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   2533 17 +      8208 --GA-TTCAG-----TCCC----TACCC--A
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     79471 19 +    610378 gtga-ttcag-----tccc----aggcc--a
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          6418 19 -     20410 GTGA-TTCAG-----TCTC----TGACC--A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    10614 19 +     15221 GTGA-TTCAG-----TCTC----TGACC--A
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        6519 19 +     19930 GTGA-TTCAG-----TCTC----TGACC--A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2949 19 -     19997 GTGA-TTCAG-----TCTC----TGACC--A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            43068 19 -     60166 GTGA-TTCAG-----TCTC----TGACC--A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        10541 19 -     27529 GTGA-TTCAG-----TCTC----TGACC--A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     10481 19 -     18194 GTGA-TTCAG-----TCTC----TGACC--A
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           4216 19 -     21137 GTGA-TTCAG-----TCTC----TGACC--A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2919 19 -     10723 GTGA-TTCAG-----TCTC----TGACC--A
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         2071 19 +      9834 GTGA-TTCAG-----TCTC----TGACC--A
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        20389 19 +     32220 GTGA-TTCAG-----TCTC----TGACC--A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5934486 19 +   6242583 GTGA-TTCAG-----TCTC----TGACC--A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        3733 19 +     20839 GTGA-TTCAG-----TCTC----TGACC--A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                   1301 19 -      1748 GTGA-TTCAG-----TTCC----CACCC--A
i Tragulus_javanicus.TraJav_scaffold_140459              I 28 C 0
s Tupaia_chinensis.KB320699.1                              2150912 17 +   4065304 atga-ttcag-----tt------tgccc--a
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     4210 17 -     10553 ATGA-TTCAG-----TT------TGCCC--A
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15738242 19 +  33153633 gtga-ttcag-----ttcc----cacct--g
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   52061 19 -     77625 atca-ctcag-----tccc----tgccc--a
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4847446 19 -   5085361 atga-tttag-----TTGC----CAACC--A
i Ursus_maritimus.KK499267.1                             I 18 C 0
s Varecia_rubra.k141_590885                                   7565 19 +     50397 GTGA-TTCAG-----TCCC----TGCCC--A
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              7613 19 +     24756 GTGA-TTCAG-----TCCC----TGCCC--A
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368899 19 -   5488506 gtga-ctcag-----ttcc----caccc--a
i Vicugna_pacos.KN270157.1                               I 9 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7908 19 -     43706 GTGA-TTGAG-----TTGC----CGACC--A
i Vulpes_lagopus.VulLag_flattened_line_30954             I 27 C 0
s Xerus_inauris.XerIna_scaffold_48378                        20239  9 -     24430 ----------------CTC----TGCCC--T
i Xerus_inauris.XerIna_scaffold_48378                    I 15 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          2154 19 +     86975 GTGA-TTCAG-----TTGT----CAACC--A
i Zalophus_californianus.ZalCal_flattened_line_17732     I 24 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      11204  9 +     63895 ----------------CTC----TGCCT--G
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 12 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11934 19 +     12536 GTGA-TTCAG-----TTCC----CACCT--G
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       2153 45 +     62944 A-AAGGAA----GTCACACA-G----A----TAAG-----CATAT-------------------------A--------G---AT--TT-T-AGTA--T--AA--------A------------------------------A-AC--A
s Acinonyx_jubatus.LLWD01001279.1                           824091 41 -   1699592 C-AAGGAA----TTCA-----G----ACAAACATA-----C-----------------------------A--------G---AT--TT-T-CATG--T--AA--------A------------------------------A-AC--A
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     66567 50 +     87051 A-AGAGAA----TTCACACA-G----A----TAAA-----T--AT-------------------------A--------T---AT--TT-T-ACTA--T--AAATCTT-ATC------------------------------A-AC--A
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507550 37 -  29979442 G-AAGGAG----CTCA-----A----A----CATA-----G-----------------------------A--------G---AT--GT-T-CATA--T--AA--------A------------------------------A-AC--A
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             76333 37 -    347723 A-AAGGAG----CTCA-----A----A----CACA-----t-----------------------------a--------g---at--tt-t-cata--t--aa--------a------------------------------a-at--a
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     65848 49 -     89534 A-AAGGAA----CTCACTCA-G----A----TCCA-----C--AT-------------------------A--------G---AT--TT-T--CCA--T--AAATCAG-ACA------------------------------A-AC--A
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   10132 45 -     52922 A-AAGGAA----CTTGCACA-G----A----TAAG-----CATAT-------------------------A--------G---AT--TT-C-ACCA--T--AA--------A------------------------------A-CC--A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         10063 45 -     28001 A-AAGGAA----CTCGCACA-G----A----TAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                           509 45 -     18505 A-AAGGAA----CTCGCACA-G----A----TAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           1358 45 -     12518 A-AAGGAA----CTCGCACA-G----A----TAAG-----CACAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675883 29 -   2318259 --------------------------A----CAAATATAAC-----------------------------A--------G---AT--TT-T-AGCA--T--AA--------A------------------------------A--C--A
i Ammotragus_lervia.NIVO01071767.1                       I 4 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183628 41 +    412891 a-aaggat----ctca-----a----a----caaa-----t-------------------------atgtg--------g---at--tt-c-aata--t--aa--------a------------------------------a-ac--a
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 2
s Antilocapra_americana.AntAmePen_scaffold_12469             98364 29 -    100397 --------------------------A----CAAACATAAC-----------------------------A--------G---AT--TT-T-AGCA--T--AA--------A------------------------------A--C--A
i Antilocapra_americana.AntAmePen_scaffold_12469         I 4 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7772 45 +     20879 A-AAAGAA----CTCACATA-G----T----TTAA-----CATAT-------------------------A--------G---AT--TT-T-GGTA--G--GA--------A------------------------------A-AC--G
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14949 50 +     17124 A-AAGGAA----CTCACAGA-G----A----TAAA-----CAGAT-------------------------A--------GTGTAT--TT-T-TATA--TATAA--------A------------------------------A-AT--A
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3039 41 +     43469 A-GAAGAT----CTCA-----G----A----CAAA-----C--------A-----T----A-A-------A--------G---AT--TT-C-AATA--T--AA--------A------------------------------A-AC--A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 2
s Avahi_laniger.k141_765380                                  49855 24 -     92717 ----------------------------------------cacat-------------------------a--------g---at--tt-t-tgtg--c--aa--------a------------------------------a-at--a
i Avahi_laniger.k141_765380                              I 17 C 0
s Avahi_peyrierasi.k141_1424874                              50463 45 +     85213 a-gaggaa----ctcacaga-g----a----caaa-----cacat-------------------------a--------g---at--tt-t-tgtg--c--aa--------a------------------------------a-at--a
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15192118 41 +  23207421 a-aaggag----ctca-----G----A----CAAACATA-C-----------------------------A--------G---AT--TT-T-AGTA--T--AA--------A------------------------------A-GC--A
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2583 41 -     18090 a-aaggag----ctca-----G----A----CAAACATA-C-----------------------------A--------G---AT--TT-T-AGTA--T--AA--------A------------------------------A-GC--A
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26805 29 +     34529 --------------------------A----CAAACATAAC-----------------------------A--------G---AT--TT-T-AGCA--T--AA--------A------------------------------A--C--A
i Beatragus_hunteri.BeaHun_scaffold_50177                I 4 C 0
s Bison_bison.KN261452.1                                    199862 29 -    288883 --------------------------A----CAAACATAAC-----------------------------A--------G---AT--TT-T-AGCA--T--AA--------A------------------------------A--C--A
i Bison_bison.KN261452.1                                 I 4 C 0
s Bos_indicus.CM003047.1                                  20273067 29 +  48749331 --------------------------A----CAAACATAAC-----------------------------A--------G---AT--TT-T-AGCA--T--AA--------A------------------------------A--C--A
i Bos_indicus.CM003047.1                                 I 4 C 0
s Bos_mutus.JH880303.1                                     1125623 29 -   1948126 --------------------------A----CAAACATAAC-----------------------------A--------G---AT--TT-T-AGCA--T--AA--------A------------------------------A--C--A
i Bos_mutus.JH880303.1                                   I 4 C 0
s Bos_taurus.CM000203.6                                   18083705 29 +  45695690 --------------------------A----CAAACATAAC-----------------------------A--------G---AT--TT-T-AGCA--T--AA--------A------------------------------A--C--A
i Bos_taurus.CM000203.6                                  I 4 C 0
s Bubalus_bubalis.KI419123.1                               2819372 29 +   4408762 --------------------------A----CAAATATAAC-----------------------------A--------G---AT--CT-T-AGCA--T--AA--------A------------------------------A--C--A
i Bubalus_bubalis.KI419123.1                             I 4 C 0
s Camelus_bactrianus.KN276810.1                            9999428 41 -  17673402 A-AAGGCG----CTCA-----G----A----CAAACACA-C-----------------------------A--------G---AT--TT-t-acta--t--ta--------a------------------------------a-ac--a
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331892 41 -   7040546 A-AAGGCG----CTCA-----G----A----CAAACACA-C-----------------------------A--------G---AT--TT-T-acta--t--ta--------a------------------------------a-ac--a
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  400168 41 -   1652518 A-AAGGCG----CTCA-----G----A----CAAACACA-C-----------------------------A--------G---AT--TT-t-acta--t--ta--------a------------------------------a-ac--a
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17796304 34 -  60362399 T-AATGAG----CTCA-----C----A----CATA-----C-----------------------------A--------G---AT--TT-T-CACA--T--AA--------A------------------------------A------
i CanFam4.chr16                                          C 0 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182361 34 -    185531 T-AATGAG----CTCA-----C----A----CATA-----C-----------------------------A--------G---AT--TT-T-CACA--T--AA--------A------------------------------A------
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 I 1
s Canis_lupus_dingo.QKWQ01000480.1                         9031747 34 -   9314153 T-AATGAG----CTCA-----C----A----CATA-----C-----------------------------a--------g---at--tt-t-caca--t--aa--------a------------------------------a------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 1
s Canis_lupus_familiaris.chr16                            17956012 34 -  59632846 T-AATGAG----CTCA-----C----A----CATA-----C-----------------------------a--------g---at--tt-t-caca--t--aa--------a------------------------------a------
i Canis_lupus_familiaris.chr16                           C 0 I 1
s Canis_lupus_orion.HG994398.1                            18497312 34 +  63665305 T-AATGAG----CTCA-----C----A----CATA-----C-----------------------------a--------g---at--tt-t-caca--t--aa--------a------------------------------a------
i Canis_lupus_orion.HG994398.1                           C 0 I 1
s Capra_aegagrus.CM003241.1                               18830001 29 +  46296322 --------------------------A----CAAATATAAC-----------------------------A--------G---AT--TT-T-ATCA--T--AA--------A------------------------------A--C--A
i Capra_aegagrus.CM003241.1                              I 4 C 0
s Capra_hircus.CM004588.1                                 18060721 29 -  44709034 --------------------------A----CAAATATAAC-----------------------------A--------G---AT--TT-T-ATCA--T--AA--------A------------------------------A--C--A
i Capra_hircus.CM004588.1                                I 4 C 0
s Carlito_syrichta.NW_007259797.1                           141555 45 -    496798 A-AAGGAA----CTCACACA-G----A----TAAG-----CATAT-------------------------A--------G---AT--TT-T-AGTA--T--AA--------A------------------------------A-AC--A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                3402 41 -     11696 a-aaggat----ctca-----G----A----CAAA-----C--------A-----T--G----T------A--------G---GT--TT-C-AACA--T--AA--------A------------------------------A-AC--A
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 2
s Castor_canadensis.CasCan_scaffold_2074                    134329 40 +    179628 A-AGGGAA----CTGACATA-G----A----TACA-----CATAT-------------------------A--------A---AT--TT-T-GGCA--T--AA----------------------------------------------
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 4
s Catagonus_wagneri.CatWag_scaffold_2839                     89772 37 +    217609 a-aaggag----ctca-----G----A----CAAG-----C-----------------------------T--------T---AC--AT-A-TTTA--T--AA--------A------------------------------A-AC--A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         5470 45 -      8605 A-AAGGAA----CTCACACA-G----A----TAAG-----CATAT-------------------------A--------G---AT--TT-T-AGTA--T--GA--------A------------------------------A-AC--A
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12228405 39 +  27778364 a-aacgat----ctca-----g----a----caaa-----c---------------------------ata--------g---at--tt-t-agta--t--aa--------a------------------------------a-ac--a
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          3123 39 -      3715 A-AACGAT----CTCA-----G----A----CAAA-----C--------A-----T--------------A--------G---AT--TT-T-AGTA--T--AA--------A------------------------------A-AC--A
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4471092 44 +   4669795 A-ATGGAA----CTCCCACA-G----A----TAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T---A--------A------------------------------A-CC--A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         9641 44 -     19203 A-ATGGAA----CTCCCACA-G----A----TAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T---A--------A------------------------------A-CC--A
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           4062 44 +      8260 A-ATGGAA----CTCCCACA-G----A----TAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T---A--------A------------------------------A-CC--A
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           4290 44 +     27781 A-ATGGAA----CTCCCACA-G----A----TAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T---A--------A------------------------------A-CC--A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         4448 45 -     20310 A-AAGGAA----CTCGCACA-G----A----TAAG-----CATGT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           7432 45 +     29689 A-AAGGAA----CTCGGACA-G----A----TAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            1868 45 +      9989 A-AAGGAA----CTCGCACA-G----A----TAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          10116 41 -     27936 A-AAGGAA----CTCGCACA-G----A----TAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A-------------------------------------
i Cercopithecus_hamlyni.k141_187466                      C 0 I 3
s Cercopithecus_lowei.k141_457449                            10142 45 -     11289 A-AAGGAA----CCCGCACA-G----A----TAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38812514 45 +  39242232 A-AAGGAA----CTTGCACA-G----A----TAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21218213 45 -  21565898 A-AAGGAA----CCCGCACA-G----A----TAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       35332 45 -     53127 A-AAGGAA----CCCGCACA-G----A----TAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        2617 45 +      7159 A-AAGGAA----CTCGCACA-G----A----TAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       10135 45 -     27947 A-AAGGAA----CCCGCACA-G----A----TAAG-----CATGT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         10111 45 +     17596 A-AAGGAA----CCCGCACA-G----A----TAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         40612 45 -     41420 A-AAGGAA----CTGGCACA-G----A----TAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            5389 15 -      6351 a-aagggg----ctca-----t----a----ca--------------------------------------------------------------------------------------------------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 I 10
s Cheirogaleus_major.k141_333249                             17254 45 -     52598 a-aaggaa----ctcacaga-g----a----taaa-----catat-------------------------a--------g---at--tt-t-agaa--t--aa--------a------------------------------c-ac--a
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12604 45 +     57038 a-aaggaa----ctcacaga-g----a----taaa-----catag-------------------------a--------g---at--tt-t-agaa--t--aa--------a------------------------------c-ac--a
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chlorocebus_aethiops.ctg25                              18424074 45 -  18827391 A-AAGGAA----CTCGCACA-G----A----TAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       10515 45 -     50209 A-AAGGAA----CTCGCACA-G----A----TAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135417523 45 + 135778131 A-AAGGAA----CTCGCACA-G----A----TAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15683 15 +     19366 A-AAGGGG----CTCA-----T----G----CA--------------------------------------------------------------------------------------------------------------------
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 I 10
s Choloepus_hoffmanni.KN194906.1                            170782 15 +    839153 a-aagggg----ctca-----T----G----CA--------------------------------------------------------------------------------------------------------------------
i Choloepus_hoffmanni.KN194906.1                         C 0 I 10
s Colobus_angolensis.KN981557.1                            1906030 45 +   2368649 A-AAGGAA----CTCGCACA-G----A----TAAG-----CATAG-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199945699 45 + 200372422 A-AAGGAA----CTCGCACA-G----A----TAAG-----CATAG-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              32571 45 +     84244 A-AAGGAA----CTCGCACA-G----A----TAAG-----CATAG-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17546837 29 -  53390261 ---------------a-----a----a----taaa---cac-----------------------------a--------a---at--tt-t-agta--t--aa--------a------------------------------a-ac--a
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          11037 41 -     20389 A-AAGTAG----CCCA-----G----A----TAAG-----C--------A-----T----A--T------A--------G---AT--TT-T-AGTA--T--AA--------A------------------------------A-AC--A
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 46812 50 +     63868 A-AGGGAA----CTCACACA-G----A----TAAA-----T--AT-------------------------A--------T---AT--TT-T-ACTA--T--AAATCTT-ATA------------------------------A-AC--A
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11663800 38 + 224834208 C-AAGGAA----TTCACaaa-g----a----taaa-----c--at-------------------------a--------t---at--tt-t-acta--T--AA----------------------------------------------
i Cricetulus_griseus.LT883664.1                          C 0 I 11
s Crocidura_indochinensis.CroInd_scaffold_419916               139 39 +      2842 A-AAGAAG----CACA-----G----A----GAAACA---C-----------------------------A--------G---AT--TA-G-AACA--T--GA--------A------------------------------A-AG--A
i Crocidura_indochinensis.CroInd_scaffold_419916         C 0 I 289
s Cryptoprocta_ferox.CryFer_flattened_line_16129             24984 42 -     87169 C-AAGGAA----TTCA-----GACAAA----CATA-----C-----------------------------A--------G---AT--TT-T-CATG--T--AA--------A------------------------------AAAA--A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            61660 15 +   2246927 a-aagggg----ctca-----t----a----ca--------------------------------------------------------------------------------------------------------------------
i Dasypus_novemcinctus.JH564415.1                        C 0 I 8
s Daubentonia_madagascariensis.ctg71                      12533416 45 -  12879189 a-aagaaa----ctcgcaga-g----a----taaa-----catac-------------------------a--------g---at--tt-t-tgta--c--aa--------a------------------------------a-ac--a
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811753 41 +  35494412 a-aagaag----ctca-----G----A----CAAACATA-C-----------------------------A--------G---AG--TT-T-AGTA--T--AA--------A------------------------------A-GC--A
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8628432 41 +  20541912 A-AAGGAT----TTCA-----G----A----CAAA-----C--------A-----T--G----T------A--------G---AT--TT-C-AGTA--T--AA--------A------------------------------A-AC--C
i Desmodus_rotundus.KZ672289.1                           C 0 I 2
s Dicerorhinus_sumatrensis.PEKH010002091.1                  670258 39 +   1390856 a-aaggag----ctca-----g----a----caaa-----c---------------------------ata--------g---at--tt-t-agta--t--aa--------a------------------------------a-ac--a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    3013 39 +    198055 a-aacgat----ctca-----G----A----CAAA-----C--------A-----T--------------A--------G---AT--TT-T-AGTA--T--AA--------A------------------------------A-AC--A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE759718.1                                   7938 52 +     11740 a-aaggag----ctca-----G----A----AAGA-----C--------A-----T--------------A--------t---ac--ca-t-agta--a--aa--------aaaa-aaa-aaa-aaa-a-------------a-aa--a
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       311036 29 +    607251 --------------------------A----CAAACATAAC-----------------------------A--------G---AT--TT-T-AGCA--T--AA--------A------------------------------A--C--A
i Elaphurus_davidianus.JRFZ01104969.1                    I 4 C 0
s Ellobius_lutescens.LOEQ01008920.1                          12606 38 -    110024 a-aagaaa----catacaaa-g----a----taaa-----t--at-------------------------a--------t---at--tt-t-acta--t--aa----------------------------------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 10
s Ellobius_talpinus.LOJH01123422.1                            3556 38 +      5358 a-aagaaa----tttacaaa-g----a----taaa-----t--at-------------------------a--------t---at--tt-t-acta--t--aa----------------------------------------------
i Ellobius_talpinus.LOJH01123422.1                       C 0 I 10
s Enhydra_lutris.KZ291758.1                               16326312 37 -  41312741 A-AAGGAG----CTCA-----A----A----CACA-----T-----------------------------A--------G---AT--Tt-t-cata--t--aa--------a------------------------------a-ac--a
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1280296 41 +   4378816 a-aaggag----ttca-----G----A----CAAA-----C--------A-----T----A--T------A--------G---AT--TT-C-AGCA--T--AA--------A------------------------------A-AC--A
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18528117 41 -  39960074 a-aaggag----ttca-----G----A----CAAA-----C--------A-----T----A--T------A--------G---AT--TT-C-AGCA--T--AA--------A------------------------------A-AC--A
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               30132 41 +    498745 a-aaggag----ttca-----G----A----CAAA-----C--------A-----T----A--T------A--------G---AT--TT-C-AGCA--T--AA--------A------------------------------A-AC--A
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3326600 37 -   7059049 C-AAAATG----TTCA-----G----A----TAGA-----C-----------------------------A--------G---AT--TT-T-AGTA--T--AA--------A------------------------------A-AC--A
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21200705 45 -  21539334 A-AAGGAA----CTCGCACA-G----A----TAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11429 41 +    133382 a-aaggag----ctca-----G----A----CAAACATA-C-----------------------------A--------G---AT--TT-T-AGCA--T--AA--------A------------------------------A-GC--A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             25366 41 -     44125 a-aaggag----ctca-----G----A----TAAACATA-C-----------------------------A--------G---AT--TT-T-AGTA--T--AA--------A------------------------------A-GC--A
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Eulemur_albifrons.k141_342033                               9935 45 -     14127 A-AAGGAA----CTCACTGA-G----A----TAAA-----CACAT-------------------------A--------G---AT--TT-T-TGTA--T--AA--------A------------------------------C-AC--A
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                2633 45 -     16928 A-AAGGAA----CTCGCTGA-G----A----TAAA-----CACAT-------------------------A--------G---AT--TT-T-TGTA--T--AA--------A------------------------------C-AC--A
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              11666 45 -     25546 A-AAGGAA----CTCACTGA-G----A----TAAA-----CACAT-------------------------A--------G---AT--TT-T-TGTA--T--AA--------A------------------------------C-AC--A
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             8851 45 +     26330 A-AAGGAA----CTCACTGA-G----A----TAAA-----CACAT-------------------------A--------G---AT--TT-T-TGTA--T--AA--------A------------------------------C-AC--A
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 10108 45 +     23973 A-AAGGAA----CTCACTGA-G----A----TAAA-----CACAT-------------------------A--------G---AT--TT-T-TGTA--T--AA--------A------------------------------C-AC--A
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 8851 45 +     75513 a-aaggaa----ctcactga-g----a----taaa-----cacat-------------------------a--------g---at--tt-t-tgta--t--aa--------a------------------------------c-ac--a
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  6803 45 +     97555 a-aaggaa----ctcactga-g----a----taaa-----cacat-------------------------a--------g---at--tt-t-tgta--t--aa--------a------------------------------c-ac--a
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                             9729 45 +     26496 a-aaggaa----ctcactga-g----a----taaa-----cacat-------------------------a--------g---at--tt-t-tgta--t--aa--------a------------------------------c-ac--a
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                   335 45 -     17153 A-AAGGAA----CTCACTGA-G----A----TAAA-----CACAT-------------------------A--------G---AT--TT-T-TGTA--T--AA--------A------------------------------C-AC--A
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                               9914 45 +    111500 a-aaggaa----ctcactga-g----a----taaa-----cacat-------------------------a--------g---at--tt-t-tgta--t--aa--------a------------------------------c-ac--a
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20233951 43 + 206538554 C-AAGGAA----TTCA-----G----ACAAACATA-----C-----------------------------A--------G---AT--TT-T-CATG--T--AA--------A------------------------------A-ACATA
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20192798 43 + 205367284 C-AAGGAA----TTCA-----G----ACAAACATA-----C-----------------------------A--------G---AT--TT-T-CATG--T--AA--------A------------------------------A-ACATA
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  6311 43 -     36744 C-AAGGAA----TTCA-----G----ACAAACATA-----C-----------------------------A--------G---AT--TT-T-CATG--T--AA--------A------------------------------A-ATATA
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galagoides_demidoff.k141_31856                              3267 47 -      3432 a-aaagaa----atagccaa-a----a----ttaa-----atcag-------------------------a--------a---at--ta-a-tgaaatt--ga--------a------------------------------a-ac--a
i Galagoides_demidoff.k141_31856                         I 2 C 0
s Galeopterus_variegatus.GalVar_scaffold_266699                149 18 +      2098 -------------------------------------------------------------------------------g---at--tt-t-agta--c--aa--------a------------------------------a-at--a
i Galeopterus_variegatus.GalVar_scaffold_266699          I 23 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     609001 29 -    660261 --------------------------A----CACACATAAC-----------------------------A--------G---AT--TT-T-AGCA--T--AA--------A------------------------------A--C--G
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 4 C 0
s Glis_glis.GliGli_scaffold_19807                            30856 45 +     49224 A-AAAGAA----CTCACATA-A----A----TAAG-----CACAT-------------------------A--------G---AT--TT-T-AGTA--T--GA--------A------------------------------A-AC--A
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_2022027                               2808 45 +      3305 A-AAGGAA----CTCACACA-G----A----TAAG-----CATAT-------------------------A--------G---AT--TT-T-AGTA--T--AA--------A------------------------------A-AC--A
i Gorilla_beringei.k141_2022027                          I 105 I 33
s Gorilla_gorilla.CYUI03001814.1                             27899 45 -     31004 a-aaggaa----ctcacaCA-G----A----TAAG-----CATAT-------------------------A--------G---AT--TT-T-AGTA--T--AA--------A------------------------------A-AC--A
i Gorilla_gorilla.CYUI03001814.1                         I 206 I 99
s Graphiurus_murinus.GraMur_scaffold_10447                   30576 45 +     78134 a-aaggaa----ctcacaTA-A----A----TAAG-----CACAT-------------------------A--------A---AT--TT-T-AGTA--T--GA--------A------------------------------A-AC--A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           2999 45 -     19426 A-AAGGAA----GTCACTGA-G----A----TAAA-----CAAAT-------------------------A--------G---AT--TT-T-TGTA--T--AA--------A------------------------------C-AC--A
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              8143 45 -     15286 A-AAGGAA----GTCACTGA-G----A----TAAA-----CAAAT-------------------------A--------G---AT--TT-T-TGTA--T--AA--------A------------------------------C-AC--A
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                              9781 45 +     18253 A-AAGGAA----GTCACTGA-G----A----TAAA-----CAAAT-------------------------A--------G---AT--TT-T-TGTA--T--AA--------A------------------------------C-AC--A
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                          9884 45 -     41752 a-aaggaa----ctcactga-g----a----taaa-----caaat-------------------------a--------g---at--tt-t-tgta--t--aa--------a------------------------------c-ac--a
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                          9717 45 -     16460 a-aaggaa----ctcactga-g----a----taaa-----caaat-------------------------a--------g---at--tt-t-tgta--t--aa--------a------------------------------c-ac--a
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               239066 20 +    327341 ----------------------------------------C-----------------------------A--------G---AT--TT-T-CATG--T--AA--------A------------------------------A-AC--A
i Helogale_parvula.HelPar_flattened_line_2585            I 159 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18205 29 +     36099 --------------------------A----CAAACATAAC-----------------------------A--------G---AT--TT-T-AGCA--T--AA--------A------------------------------A--C--A
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 4 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112566 11 +    128679 A-AAGAAG----TTCA-------------------------------------------------------------------------------------------------------------------------------------
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 I 3
s Hipposideros_armiger.JXIK01000431.1                       108815 39 +   1711038 a-aaggag----ctca-----G----A----CAAA-----C--------A-----T--------------A--------G---AT--TT-T-agta--t--aa--------a------------------------------a-ac--a
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               40266 24 +     43066 ---------------------------------AA-----C--------A-----T--------------A--------G---AT--TT-T-AGTA--T--AA--------A------------------------------A-AC--A
i Hipposideros_galeritus.HipGal_scaffold_29171           I 11 C 0
s Hoolock_leuconedys.ctg274                                    430280 45 +    630532 A-AAGGAA----CTCACACA-G----A----TAAG-----CGCAT-------------------------A--------G---AT--TT-T-AGTA--T--AA--------A------------------------------A-AC--A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  41436 41 +     55795 T-AAGGAA----TTCA-----GACAAA----CATA-----T-----------------------------A--------G---AT--TT-T-CATG--T--AA--------A------------------------------A-AT--A
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_307679                               13212 44 -     15490 A-AAA-AA----CTCACACA-G----A----TAAG-----CATAT-------------------------A--------G---AT--TT-T-AGTA--T--AA--------A------------------------------A-AT--A
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              55217 45 +     67168 A-AAGGAA----CTCACACA-G----A----TAAG-----CATAT-------------------------A--------G---AT--TT-T-AGTA--T--AA--------A------------------------------A-AT--A
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189538867 45 - 191637585 A-AAGGAA----CTCACACA-G----A----TAAG-----CATAT-------------------------A--------G---AT--TT-T-AGTA--T--AA--------A------------------------------A-AT--A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3331760 45 -  11177569 A-AAGGAA----CTCACACA-G----A----TAAG-----CATAT-------------------------A--------G---AT--TT-T-AGTA--T--AA--------A------------------------------A-AT--A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7515106 45 -   7955117 a-aaggaa----ctcacacc-g----t----ttaa-----catat-------------------------g--------g---at--tt-t-gata--t--aa--------a------------------------------a-ac--a
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   18700 45 +     31101 a-aaggaa----ctcacaga-g----a----taaa-----catgt-------------------------a--------g---at--tt-t-tgta--t--aa--------a------------------------------a-ac--a
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               22970 41 +     23964 A-AAGGAG----CTCA-----G----A----CAAACATA-C-----------------------------A--------G---AT--TT-T-AGTA--T--AA--------A------------------------------A-GC--A
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8272212 49 -   9596543 A-AAGGAA----CTCACACA-G----A----TCCA-----C--AT-------------------------A--------G---AT--TT-T--CCA--T--AAATGAG-ACA------------------------------A-AC--A
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                2342 27 -      3359 --------------------------------AAACAT-GC-----------------------------A--------G---AT--TT-T-AGTA--T--AA--------A------------------------------A-GC--G
i Kogia_breviceps.KogBre_flattened_line_192630           I 10 C 0
s Lemur_catta.scaffold_24                                 15520244 45 -  30322482 g-aaggaa----ctcactga-g----a----taaa-----caaat-------------------------a--------g---at--tt-t-tgta--t--aa--------a------------------------------c-ac--a
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          7155 45 -     23766 a-aaggaa----ctcacaga-g----a----taaa-----catat-------------------------a--------g---at--tt-t-ggta--t--aa--------a------------------------------a-ac--a
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             25102 45 +     45836 a-aaggaa----ctcacaga-g----a----taaa-----catat-------------------------a--------g---at--tt-t-ggta--t--aa--------a------------------------------a-ac--a
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         32014 45 -     32627 a-aaggaa----ctcacaga-g----a----taaa-----catat-------------------------a--------g---at--tt-t-tgta--t--aa--------a------------------------------a-ac--a
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      23157 45 +     54090 a-aaggaa----ctcacaga-g----a----taaa-----catat-------------------------a--------g---at--tt-t-ggta--t--aa--------a------------------------------a-ac--a
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3039461 37 +   3914936 A-AAGGAG----TTCA-----A----A----CATA-----G-----------------------------A--------g---at--tt-t-cata--t--aa--------a------------------------------a-ac--a
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             268022 41 -    662738 a-aaggag----ctca-----G----A----CAAACATA-C-----------------------------A--------G---AT--TT-T-AGTA--T--AA--------A------------------------------A-GC--A
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1432636 45 +   1826925 A-AAGGAA----CTCGCACA-G----A----TAAG-----CATAT-------------------------A--------G---AC--TG-C-ACTA--T--AA--------A------------------------------A-CC--A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            1193 45 +     11245 a-aaggaa----ctcacagg-g----a----taaa-----a---c-------------------------a--------gtgtat--tt-t-agta--t--aa--------a------------------------------a-at--a
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1000030 45 +   6120653 a-aaggaa----ctcacagg-g----a----taaa-----a---c-------------------------a--------gtgtat--tt-t-agta--t--aa--------a------------------------------a-at--a
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17952252 34 -  59628241 T-AATGAG----CTCA-----C----A----CATA-----C-----------------------------a--------g---at--tt-t-caca--a--aa--------a------------------------------a------
i Lycaon_pictus.CM007581.1                               C 0 I 1
s Macaca_arctoides.k141_2326796                               2457 45 +     40492 A-AAGGAA----CTCGCACA-G----A----TAAG-----CATAT-------------------------A--------G---AC--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59671712 45 +  60120075 A-AAGGAA----CTCGCACA-G----A----TAAG-----CATAT-------------------------A--------G---AC--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  8212 45 -     26193 A-AAGGAA----CTCGCACA-G----A----TAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            76009 45 -    114318 A-AAGGAA----CTCGCACA-G----A----TAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  1724 45 -     23192 A-AAGGAA----CTCGCACA-G----A----TAAG-----CATAT-------------------------A--------G---AC--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                11177 45 -     29190 A-AAGGAA----CTCGCACA-G----A----TAAG-----CATAT-------------------------A--------G---AC--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  19744 45 +     37952 A-AAGGAA----CTCGCACA-G----A----TAAG-----CATAT-------------------------A--------G---AC--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834832 45 + 187317192 A-AAGGAA----CTCGCACA-G----A----TAAG-----CATAT-------------------------A--------G---AC--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25453395 45 -  25927173 A-AAGGAA----CTTGCACA-G----A----TAAG-----CATAT-------------------------A--------G---AC--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  75593 45 +     89720 A-AAGGAA----CTCGCACA-G----A----GAAG-----CATAT-------------------------A--------G---AC--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 2591 45 +     20474 A-AAGGAA----CTCGCACA-G----A----TAAG-----CATAT-------------------------A--------G---AC--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   2392 45 -     14993 A-AAGGAA----CTCGCACA-G----A----TAAG-----CATAT-------------------------A--------G---AC--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  325264 45 -    668171 A-AAGGAA----CTCGCACA-G----A----TAAG-----CATAT-------------------------A--------G---AC--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                  695 45 -     24072 A-AAGGAA----CTCGCACA-G----A----TAAG-----CATAT-------------------------A--------G---AC--TT-C-AGTA--T--AA--------A------------------------------A-CC--A
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               21331 45 -     45290 A-AAGGAA----CTCGCACA-G----A----TAAG-----CATAT-------------------------A--------G---AC--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88035 53 +     94391 a-aaggag----ctca-----a----a----atga-----c---------------------------ata--------t---ac--tg-t-agta--a--aa--------aaaataaa-aa-taaa-a-------------a-ta--a
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23932880 44 -  24302211 A-ATGGAA----CTCGCACA-G----A----TAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T---A--------A------------------------------A-CC--A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               347057 44 +    752769 A-ATGGAA----CTCGCACA-G----A----TAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T---A--------A------------------------------A-CC--A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              16122 37 +    737560 a-aaggaa----ctca-----a----a----cata-----t-----------------------------a--------g---at--tt-a-agta--t--gg--------a------------------------------a-gc--a
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              47507 37 -    317179 a-aagaaa----ctca-----a----a----cata-----t-----------------------------a--------g---at--tt-a-agta--t--gg--------a------------------------------a-gc--a
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33097956 45 -  40650429 a-aaggaa----ctcacaCG-G----T----TTAA-----CATAT-------------------------G--------G---AT--TT-t-gata--t--aa--------a------------------------------a-ac--a
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         7318 41 -    207569 A-AAGGAG----TTCA-----G----A----TAAA-----C--------A-----T----AC--------A--------G---AT--TT-T-AGTA--T--AA--------A------------------------------A-AT--A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              7023 34 +     13704 A-AA---G----CTCA-----A----A----CACA-----T-----------------------------A--------G---AT--TT-T-CATA--T--AA--------A------------------------------A-AC--A
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 28103 42 +    140813 A-AGGGAATTAATTCACACA-G----A----CAAA-----T--AC-------------------------A--------T---AT--TT-T-ACTA--T--GA----------------------------------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 4
s Mesocricetus_auratus.KB708134.1                         12178194 37 -  29670104 C-AAGGAA----TTCACAAA-A----A----TA-A-----C--AT-------------------------A--------C---AT--TT-T-ACTA--T--AA----------------------------------------------
i Mesocricetus_auratus.KB708134.1                        C 0 I 11
s Mesoplodon_bidens.MesBid_scaffold_108144                    3638 41 +     10310 A-AAGGAG----CTCA-----G----A----CAAACATA-C-----------------------------A--------G---AT--TT-T-AGTA--T--AA--------A------------------------------A-GC--A
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18287639 45 -  93316391 A-AAGGAA----CTCACAGA-A----A----CAAA-----CATAT-------------------------A--------G---AT--TT-T-TGTA--T--AA--------A------------------------------C-AC--A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13945 42 -     19307 A-GAGGAT----CTCA----AG----A----CAAG-----C--------A-----T--G----T------A--------G---AT--TT-C-AGTA--T--AA--------A------------------------------A-AC--A
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 2
s Microtus_ochrogaster.CM001695.1                         11256522 38 -  27267610 A-GAGAAA----GTTACAac-g----a----taaa-----t--at-------------------------a--------t---at--tt-t-acta--t--aa----------------------------------------------
i Microtus_ochrogaster.CM001695.1                        C 0 I 10
s Miopithecus_ogouensis.k141_534055                           4630 45 -     28506 A-AATGAA----CTCGCACA-G----A----TAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         2297 37 -      8324 A-AAGGAG----TTCA-----A----A----CATA-----G-----------------------------A--------G---AT--TT-T-CATA--T--AA--------A------------------------------A-AC--A
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      5207 45 -     37649 a-aaggaa----ctcacaga-g----a----caaa-----catat-------------------------a--------g---at--tt-t-tgta--t--aa--------a------------------------------c-ac--a
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    27143 41 -    437263 A-AAGAAG----CTCA-----G----A----CAAACATA-C-----------------------------A--------G---AG--TT-T-AGTA--T--AA--------A------------------------------A-GT--A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138347 42 -    366855 a-aaggat----ctca-----G----A----CAAA-----C--------A-----T--G----T------C--------G---AT--TT-CTAGTA--T--AA--------A------------------------------A-CC--A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 2
s Moschus_moschiferus.MosMos_scaffold_13123                   1087 29 +     82753 --------------------------A----CAAACATAAC-----------------------------A--------G---AT--TT-T-AGCA--T--AA--------A------------------------------A--C--A
i Moschus_moschiferus.MosMos_scaffold_13123              I 4 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   32139 41 +     37127 C-AAGGAA----TTCA-----GACAAA----CATA-----C-----------------------------A--------G---AT--TT-T-CATG--T--AA--------A------------------------------A-AC--A
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Mus_caroli.LT608237.1                                   84357155 49 - 120012414 A-AGAgaa----ttcacaca-c----a----taaa-----c--at-------------------------a--------t---at--tt-c-aCTA--T--ACA-CTT-ATT------------------------------A-AC--A
i Mus_caroli.LT608237.1                                  I 21 C 0
s Mus_musculus.chr8                                       87646128 49 - 129401213 A-AGAgaa----ttcacaca-c----a----taaa-----c--at-------------------------a--------t---at--tt-c-aCTA--T--AAA-CTT-ATT------------------------------A-AC--A
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  90748202 49 - 130317789 A-AGAgga----ttcacaca-c----a----taaa-----c--at-------------------------a--------t---at--tt-c-aCTA--T--AAA-CTT-ATT------------------------------A-AC--A
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2848 43 +     14296 A-AAGGGG----CTCAC--A-A----A----TAAA-----CACAA-------------------------A--------G---AT--TT-T-AGTA--T--GA--------A------------------------------A-AC--T
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 42
s Mustela_putorius.JH418006.1                               298209 37 -  14710649 A-AAGGAG----CTCA-----A----A----CACA-----t-----------------------------a--------g---at--tt-t-caaa--t--aa--------a------------------------------a-ac--a
i Mustela_putorius.JH418006.1                            C 0 C 0
s Nannospalax_galili.AXCS01343547.1                            150 22 +       996 ---------------------------------------------------------------------------------------TT-T-ACTA--T--AAAGCTT-ATA------------------------------A-GC--A
i Nannospalax_galili.AXCS01343547.1                      I 20 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186633 15 +    196477 A-AAGGGG----CCCA-----T----A----CA--------------------------------------------------------------------------------------------------------------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 I 10
s Nasalis_larvatus.k141_413338                               10630 45 +     21681 A-AAGGAA----CTCGCACA-G----A----GAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5866099 41 +   7148211 a-aagaag----ctca-----G----A----CAAACATA-C-----------------------------A--------G---AG--TT-T-AGTA--T--AA--------A------------------------------A-GC--A
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756902 41 +    783361 a-aaggat----ctca-----g----a----caaa-----a-------------------------atgta--------g---at--tt-c-agta--t--aa--------a------------------------------a-ac--a
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 2
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146513 34 -   9404916 T-AAAGAG----CTCA-----C----A----CATA-----C-----------------------------A--------G---AT--TT-T-CACA--T--AA--------A------------------------------A------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 1
s Nycticebus_bengalensis.LG01                            102575011 47 - 196305487 a-aaggaa----ctcacagg-g----a----taaa-----a---c-----------------------ata--------gtgtat--tt-t-agta--t--aa--------a------------------------------a-at--a
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2697 47 +      8486 A-AAGGAA----CTCACAGG-G----A----TAAA-----A---C----A-----T--------------A--------GTGTAT--TT-T-AGTA--T--AA--------A------------------------------A-AT--A
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105745438 47 + 199412804 a-aaggaa----ctcacagg-g----a----taaa-----a---c-----------------------ata--------gtgtat--tt-t-agta--t--aa--------a------------------------------a-at--a
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1359151 69 +   3988456 A-CAGGAA----CCTGGGAT-G----A----TAAA-----CACACTTGTAAAGAATTTGCACATATATCAACAAACCTGA---AT--CTCC-AG-------------------------------------------------------
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              503603 37 -   2017862 A-AAGGAG----CTCA-----A----A----CATA-----G-----------------------------a--------g---at--tt-t-cata--t--aa--------a------------------------------a-ac--a
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         145409 29 +    630418 --------------------------A----CAAACATAAC-----------------------------A--------G---AT--TT-T-AGCA--T--AA--------A------------------------------A--C--A
i Odocoileus_virginianus.KZ100018.1                      I 4 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          76918 29 -    150152 --------------------------A----CACACATAAC-----------------------------A--------G---AT--TT-T-AGCA--T--AA--------A------------------------------A--C--A
i Okapia_johnstoni.LVCL01S0005463.1                      I 4 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   16859 38 +     28053 A-AAGAAA----TTTACAAA-G----A----TAAA-----T--AT-------------------------A--------T---AT--TT-T-ACTA--C--AA----------------------------------------------
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 11
s Onychomys_torridus.OnyTor_scaffold_2986                    74961 38 +    102263 A-GAGAAA----TTCACAAA-G----A----TAAA-----C--AT-------------------------A--------T---AT--TT-T-ACTA--T--AA----------------------------------------------
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 11
s Orcinus_orca.KB316932.1                                  2782014 41 -  10937097 a-aagaag----ctca-----G----A----CAAACATA-C-----------------------------A--------G---AG--TT-T-AGTA--T--AA--------A------------------------------A-GC--A
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       459266 35 -    559221 T-AATGAG----CTCA-----C----A----CATA-----C-----------------------------A--------g---ct--tt-t-caca--t-taa--------a------------------------------a------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 1
s Ovis_aries.CM001607.2                                   17586180 29 +  44047080 --------------------------A----CAAACATAAC-----------------------------A--------G---AT--TT-T-AGCA--T--AA--------A------------------------------A--C--A
i Ovis_aries.CM001607.2                                  I 4 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      174157 29 -    191736 --------------------------A----CAAACATAAC-----------------------------A--------G---AT--TT-T-AGCA--T--AA--------A------------------------------A--C--A
i Ovis_canadensis.OviCan_scaffold_2572                   I 4 C 0
s Pan_paniscus.KQ411613.1                                    39505 45 +     80009 A-AAGGAA----CTCACACA-G----A----TAAG-----CATAT-------------------------A--------G---AT--TT-t-agta--t--aa--------a------------------------------a-ac--a
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189138398 45 + 189151597 a-aaggAA----CTCACACA-G----A----TAAG-----CATAT-------------------------A--------G---AT--TT-t-agta--t--aa--------a------------------------------a-ac--a
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  147965 37 +    230217 C-AAGGAA----TTCA-----G----A----CATA-----C-----------------------------A--------G---AT--TT-T-CATG--T--AA--------A------------------------------A-AC--A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                261172 37 +  18783137 C-AAGGAA----TTCA-----G----A----CATA-----C-----------------------------A--------G---AT--TT-T-CATG--T--AA--------A------------------------------A-AC--A
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4717809 37 -   8748460 C-AAGGAA----TTCA-----G----A----CATA-----C-----------------------------A--------G---AT--TT-T-CATG--T--AA--------A------------------------------A-AC--A
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1265074 29 -   2937107 --------------------------A----CAAACATAAC-----------------------------A--------G---AT--TT-T-AGCA--T--AA--------A------------------------------A--C--A
i Pantholops_hodgsonii.KE114653.1                        I 4 C 0
s Papio_anubis.CM001495.2                                183438665 45 + 183742232 A-AAGGAA----CTCGCACA-G----A----TAAG-----CATAT-------------------------A--------G---AC--TG-C-ACTA--T--AA--------A------------------------------A-CC--A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             2358 45 +     20448 A-AAGGAA----CTCGCACA-G----A----TAAG-----CATAT-------------------------A--------G---AC--TG-C-ACTA--T--AA--------A------------------------------A-CC--A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20559163 45 +  20919399 A-AAGGAA----CTCGCACA-G----A----TAAG-----CATAT-------------------------A--------G---AC--TG-C-ACTA--T--AA--------A------------------------------A-CC--A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   1101 45 +     41871 A-AAGGAA----CTCGCACA-G----A----TAAG-----CATAT-------------------------A--------G---AC--TG-C-ACTA--T--AA--------A------------------------------A-CC--A
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     4387 45 +     27711 A-AAGGAA----CTCGCACA-G----G----TAAG-----CATAT-------------------------A--------G---AC--TG-C-ACTA--T--AA--------A------------------------------A-CC--A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  4472 45 +      9205 A-AAGGAA----CTCGCACA-G----A----TAAG-----CATAT-------------------------A--------G---AC--TG-C-ACTA--T--AA--------A------------------------------A-CC--A
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9637 19 -     78924 -------------------------------CATA-----G-----------------------------A--------G---AT--TT-T-CATG--T--AA----------------------------------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 13 I 4
s Perodicticus_ibeanus.k141_855320                            5185 48 +     13100 A-AAGGAA----CTCACAGA-G----A----TAAA-----CAGAT-------------------------A--------GTGTAT--TT-T-AGTA--T--AA--------A------------------------------A-AT--A
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             3558 48 +     25941 a-aaggaa----ctcacaga-g----a----taaa-----cagat-------------------------a--------gtgtat--tt-t-agta--t--aa--------a------------------------------a-at--a
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18187747 38 -  18517816 A-GAGAAA----TTCACAAA-A----A----TGAA-----C--AT-------------------------A--------T---AT--TT-T-ACTA--T--AA----------------------------------------------
i Peromyscus_maniculatus.KI615324.1                      C 0 I 11
s Phocoena_phocoena.PhoPho_flattened_line_24159               9061 41 +     63832 a-aagaag----ctca-----G----A----CAAACATA-C-----------------------------A--------G---AG--TT-T-AGTA--T--AA--------A------------------------------A-GC--A
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           39142 45 +     62158 A-AAGGAA----CTCGCACA-G----A----TTAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33864 45 +     89929 A-AAGGAA----CTCGCACA-G----A----TTAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            35280 45 +     51399 A-AAGGAA----CTCGCACA-G----A----TTAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14291516 45 -  14605196 A-AAGGCA----CTCACACA-G----A----TTAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34767 41 +     35617 A-AAGGAG----CTCA-----G----A----CAAACATA-C-----------------------------A--------G---AT--TT-T-AGTA--T--AA--------A------------------------------A-GC--A
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189126590 45 + 189387572 A-AAGGAA----CTCACACA-G----A----TAAG-----CATAT-------------------------A--------G---AT--TT-T-agta--t--aa--------a------------------------------a-ac--a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9566196 45 +   9816681 A-AAGGAA----CTCACACA-G----A----TAAG-----CATAT-------------------------A--------G---AT--TT-T-AGTA--T--AA--------A------------------------------A-AC--A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68791 45 -     81375 A-AAGGAA----CTCGCACA-G----A----GAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                               612 45 +     19060 A-AAGGAA----CTCGCACA-G----A----GAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2592896 45 -   4620579 A-AAGGAA----CTCACTGA-G----A----TAAA-----CAAAT-------------------------A--------G---AT--TT-T-TGTA--T--AA--------A------------------------------C-AC--A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986909 45 +   2598838 A-AAGGAA----TTCACAGA-G----A----TAAA-----CATAT-------------------------A--------G---AT--TT-T-TGTG--T--AA--------A------------------------------A-AC--A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          25198 45 +     38485 A-AAGGAA----TTCACAGA-G----A----TAAA-----CATAT-------------------------A--------G---AT--TT-T-TGTG--T--AA--------A------------------------------A-AC--A
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             1357 45 +      4256 A-AAGGAA----TTCACAGA-G----A----TAAA-----CATAT-------------------------A--------G---AT--TT-T-TGTG--T--AA--------A------------------------------A-AC--A
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22717 45 +     35766 a-aaggaa----ttcacaga-g----a----taaa-----catat-------------------------a--------g---at--tt-t-tgtg--t--aa--------a------------------------------a-ac--a
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            900 45 -     24134 A-AAGGAA----TTCACAGA-G----A----TAAA-----CATAT-------------------------A--------G---AT--TT-T-TGTG--T--AA--------A------------------------------A-AC--A
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24712 45 -     67325 a-aaggaa----ttcacaga-g----a----taaa-----catat-------------------------a--------g---at--tt-t-tgtg--t--aa--------a------------------------------a-ac--a
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                            957 45 -      6182 A-AAGGAA----TTCACAGA-G----A----TAAA-----CATAT-------------------------A--------G---AT--TT-T-TGTG--T--AA--------A------------------------------A-AC--A
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             5738 40 -     21651 A-AGAGAA----TTCACACA-G----A----CAAA-----T--AT-------------------------A--------T---ATAGTT-T-ACTA--T--GA----------------------------------------------
i Psammomys_obesus.NESX01036370.1                        C 0 I 4
s Pteronotus_parnellii.KE909381.1                            11743 41 -     21811 A-AAAGAC----CTCA-----G----A----CAAA-----C--------A-----T--G----T------A--------A---AT--TT-C-AGTA--T--AA--------A------------------------------A-AC--A
i Pteronotus_parnellii.KE909381.1                        C 0 I 2
s Pteronura_brasiliensis.PteBra_flattened_line_31117         37220 37 +     42204 A-AAGGAG----CTCA-----A----A----CACA-----T-----------------------------A--------G---AT--TT-T-CATG--T--AA--------A------------------------------A-AC--A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22974208 35 +  28871421 a-aaggag----ctca-----g----a----aaga-----c---------------------------ata--------t---ac--tg-t-agta--a--aa--------a-------------------------------------
i Pteropus_alecto.KB030862.1                             C 0 I 19
s Pteropus_vampyrus.KN534172.1                                2146 61 -      8028 a-aaggag----ctca-----G----A----AAGA-----C--------A-----T--------------A--------T---AC--Tg-t-act---a--aa--------cacacacacacacacacacaca-ca-ca--ca------
i Pteropus_vampyrus.KN534172.1                           C 0 I 4483
s Puma_concolor.QAVW01001104.1                            20271096 41 -  38429054 C-AAGGAA----TTCA-----G----ACAAACATA-----C-----------------------------A--------G---AT--TT-T-CATG--T--AA--------A------------------------------A-AC--A
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             10623 45 -     91421 A-AAGGAA----CTTGCACA-G----A----GAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7604751 45 +   7812017 A-AAGGAA----CTTGCACA-G----A----GAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10592 45 -     72585 A-AAGGAA----CTTGCACA-G----A----GAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5657 29 +     55207 --------------------------A----CAAACATAAC-----------------------------A--------G---AT--TT-T-AGCA--T--AA--------A------------------------------A--C--A
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 4 C 0
s Rattus_norvegicus.chr16                                 53566019 49 +  90668790 A-AGAgaa----ttcatata-c----a----taaa-----c--at-------------------------a--------t---at--tt-t-actG--T--AAA-CTT-ATT------------------------------A-AC--A
i Rattus_norvegicus.chr16                                I 22 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        367358 41 -   3329780 a-aaggag----ctca-----G----A----CAAA-----C--------A-----T----A--T------A--------G---AT--TT-T-AGTA--T--AA--------A------------------------------A-TC--A
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             2307 45 -     11128 A-AAGGAA----CTCGCACA-G----A----GAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91231662 45 - 195417433 A-AAGGAA----CTCGCACA-G----A----GAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7667311 45 +   7961872 A-AAGGAA----CTCGCACA-G----A----GAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85192 69 -     96226 a-aaggag----ctca-----g----a----aaga-----c---------------------------ata--------t---ac--tg-t-agtt--a--aa--------caaacaaacaaacaaacaaacaacaacaaaaa-ac--a
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151893 39 -    313613 a-aaggaa----ctca-----G----A----TAAACA---C-----------------------------A--------G---AT--TT-T-AGTA--T--AA--------A------------------------------A-GC--A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 1
s Semnopithecus_entellus.k141_11662                          15135 45 -     19888 A-AAGGAA----CTCGCACA-G----A----GAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      22337 45 +     39453 A-AAGGAA----CTCGCACA-G----A----GAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2863 45 +     27826 A-AAGGAA----CTCGCACA-G----A----GAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             2384 45 -     19483 A-AAGGAA----CTCGCACA-G----A----GAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      2446 45 +      7198 A-AAGGAA----CTCGCACA-G----A----GAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         10706 45 +     15514 A-AAGGAA----CTCGCACA-G----A----GAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            188196 37 -    191337 A-AAGGAG----CTCA-----G----A----TAAA-----C-----------------------------A--------G---AT--TT-T-ACTA--T--AA--------A------------------------------A-AC--A
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13648386 35 -  18376816 A-AAGAAG----AACA-----G----T----TA-------c-----------------------------a--------g---at--tt-t-aaca--t--aa--------a------------------------------a-at--a
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1948739 45 -   3870691 a-aaggaa----ctcacaCG-G----T----TTAA-----CATAT-------------------------G--------G---AT--TT-t-gata--t--aa--------a------------------------------a-ac--a
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27739 29 +     97271 A-AAGGAG----CTCA-----A----A----CACA-----T-----------------------------G--------A---AT--TT-T-CATA-----------------------------------------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 6
s Suricata_suricatta.SurSur_flattened_line_6629              15046 41 -    196729 C-AAGGAA----TTCA-----GACAAA----CATA-----C-----------------------------A--------G---AT--TT-T-CATG--T--AA--------A------------------------------A-AC--A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.JH118708.1                                      32265 21 -     47482 a-acggag----ctca-----G----a----caaa-----c-----------------------------a--------c---a-----------------------------------------------------------------
i Sus_scrofa.JH118708.1                                  C 0 I 14
s Symphalangus_syndactylus.tarseq_199                      1088911 45 -   1523678 A-AAGGAA----CTCACACA-G----A----TAAG-----CATAT-------------------------A--------G---AT--TT-T-AGTA--T--AA--------A------------------------------A-AT--A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 7341 41 +     41958 A-AAGGAG----CTCA-----G----A----CAAA-----C--------A-----T--G----T------A--------G---AT--TT-C-AGTA--T--AA--------A------------------------------A-AC--A
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 5 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 69987 15 +    116680 A-CAGGGG----CCCA-----T----A----CA--------------------------------------------------------------------------------------------------------------------
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 I 10
s Tapirus_indicus.TapInd_scaffold_9301                      115740 39 -    156842 a-aaggat----ctca-----g----a----taaa-----c---------------------------ata--------g---at--tt-t-agca--t--aa--------a------------------------------a-ac--a
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    384191 39 +    539355 a-aaggag----ctca-----g----a----taaa-----c---------------------------gta--------g---at--tc-t-agca--t--aa--------a------------------------------a-ac--a
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               11168 45 +     70052 a-aaggaa----ctcacaca-g----a----taag-----catat-------------------------a--------g---at--tt-t-agta--t--aa--------a------------------------------a-ac--a
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               15473 45 +     25099 A-AAGGAA----CTCACACA-G----A----TAAG-----CATAT-------------------------A--------G---AT--TT-T-AGTA--T--AA--------A------------------------------A-AC--A
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186423709 45 + 186847797 A-AAGGAA----CTCACACA-G----A----TAAG-----CATAT-------------------------A--------G---AC--TG-C-ACTA--T--AA--------A------------------------------A-CC--A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   2550 15 +      8208 A-AAGGGG----CTCA-----T----A----CA--------------------------------------------------------------------------------------------------------------------
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 I 10
s Tonatia_saurophila.TonSau_scaffold_294                     79490 41 +    610378 a-aaggat----ctca-----G----A----CAAA-----T--------A---------CA--T------A--------G---AT--TT-C-AATA--T--AA--------A------------------------------A-AC--A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 2
s Trachypithecus_auratus.k141_722599                          6437 45 -     20410 A-AAGGAA----CTCGCACA-G----A----GAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTG--T--AA--------A------------------------------A-CC--A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    10633 45 +     15221 A-AAGGAA----CTCGCACA-G----A----GAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTG--T--AA--------A------------------------------A-CC--A
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        6538 45 +     19930 A-AAGGAA----CTCGCACA-G----A----GAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTG--T--AA--------A------------------------------A-CC--A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       2968 45 -     19997 A-AAGGAA----CTCGCACA-G----A----GAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            43087 45 -     60166 A-AAGGAA----CTCGCACA-G----A----GAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        10560 45 -     27529 A-AAGGAA----CTCGCACA-G----A----GAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     10500 45 -     18194 A-AAGGAA----CTCGCACA-G----A----GAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           4235 45 -     21137 A-AAGGAA----CTCGCACA-G----A----GAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2938 45 -     10723 A-AAGGAA----CTCGCACA-G----A----GAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         2090 45 +      9834 A-AAGGAA----CTCGCACA-G----A----GAAG-----CATGT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        20408 45 +     32220 A-AAGGAA----CTCGCACA-G----A----GAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5934505 45 +   6242583 A-AAGGAA----CTCGCACA-G----A----GAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTG--T--AA--------A------------------------------A-CC--A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        3752 45 +     20839 A-AAGGAA----CTCGCACA-G----A----GAAG-----CATAT-------------------------A--------G---AT--TT-C-ACTA--T--AA--------A------------------------------A-CC--A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                   1320 40 -      1748 A-AAGAAG----CTCA-----G----A----CAGACATA-C-----------------------------A--------G---AT--TT-T-AGTA--T--AA--------A------------------------------A--T--A
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 C 0
s Tupaia_chinensis.KB320699.1                              2150929 44 +   4065304 a-aaggaa----ttcacaca-g----a----gaaa-----cataa-------------------------a--------g---ag--ct-g-aata--t--a---------a------------------------------a-ac--a
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     4227 44 -     10553 A-AAGGAA----TTCACATA-G----A----GAAA-----CATGA-------------------------A--------G---AG--TT-G-AATA--T--A---------A------------------------------A-AC--A
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15738261 41 +  33153633 a-aagaag----ctca-----G----A----CAAACATA-C-----------------------------A--------G---AG--TT-T-AGTA--T--AA--------A------------------------------A-GC--A
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   52080 39 -     77625 g-aaagaa----ctca-----G----A----TAAACA---C-----------------------------A--------G---AT--TT-T-AGTG--T--AA--------A------------------------------A-AC--A
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4847465 37 -   5085361 A-AAGGAG----CTCA-----A----A----CATA-----T-----------------------------A--------G---AT--GT-T-CATA--T--AA--------A------------------------------A-AC--A
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   7584 33 +     50397 A-AAGGAA----CTCACTGA-G----A----TAAA-----CATAC-------------------------A--------G---AT--TT-T----------------------------------------------------------
i Varecia_rubra.k141_590885                              C 0 I 6
s Varecia_variegata.k141_1128296                              7632 45 +     24756 A-AAGGAA----CTCACTGA-G----A----TAAA-----CATAC-------------------------A--------G---AT--TT-T-TGTA--T--AA--------A------------------------------C-AC--A
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368918 41 -   5488506 a-aaggag----ctca-----g----a----caca-catac-----------------------------a--------g---ac--tt-c-acta--t--ta--------a------------------------------a-ac--a
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7927 34 -     43706 T-AATGAG----CTCA-----C----A----CATA-----C-----------------------------A--------G---AT--TT-T-CACA--T--AA--------A------------------------------A------
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 1
s Xerus_inauris.XerIna_scaffold_48378                        20248 45 -     24430 A-AAGGAA----TGCACATA-G----T----TTAA-----CATAT-------------------------A--------G---AT--TT-T-GGTA--T--AA--------A------------------------------A-AC--A
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          2173 37 +     86975 A-AAGGAG----CTCT-----A----A----CATA-----G-----------------------------A--------A---AT--TT-T-CATA--T--AA--------A------------------------------A-AC--A
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      11213 49 +     63895 A-AAGGAA----CTCATACA-G----A----TTAA-----C--AT-------------------------A--------G---AT--TT-A--TCA--T--AAATCAT-ACA------------------------------A-AC--A
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11953 41 +     12536 A-AAGGAG----CTCA-----G----A----CAAACATA-C-----------------------------A--------G---AT--TT-T-AGTA--T--AA--------A------------------------------A-GC--A
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       2198 20 +     62944 T--------A------------T-A-------AA-------CCATGGA------ATGT----CCT
s Acinonyx_jubatus.LLWD01001279.1                           824132 11 -   1699592 ----------------------T-G-------AA-------C----------AG---T----Tct
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 194
s Acomys_cahirinus.AcoCah_scaffold_12655                     66617 12 +     87051 G--------T------------G-T-------AA-------TA--------------T----GCT
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507587 19 -  29979442 T--------A------------A-G-------AA-------C-------AGTGTATGC----TTT
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             76370 20 -    347723 t--------a------------t-a-------aa-------c------agtggTATGT----TCT
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     65897 13 -     89534 G--------T------------G-A-------AA-------GA--------------T---CTAT
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   10177 20 -     52922 T--------A------------G-A-------AA-------CCATGGA------ACGT----TCT
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         10108 20 -     28001 T--------A------------G-A-------AA-------CCACGGA------ACAT----TCT
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                           554 20 -     18505 T--------A------------G-A-------AA-------CCACGGA------ACAT----TCT
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           1403 20 -     12518 T--------A------------G-A-------AA-------CCACGGA------ACGT----TCT
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675912 20 -   2318259 T--------A------------T-A-------AA-------C------AGTAGCATGT----TCT
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183671 18 +    412891 t--------a------------a-a-c-a-gaGG-------T------------ACGT----TCT
i Anoura_caudifer.AnoCau_scaffold_1412                   I 2 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             98393 20 -    100397 T--------A------------T-A-------AA-------C------AGTAGCACAT----TCT
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7817 18 +     20879 C--------A------------T-C-------AA-------TAGTG--------ACAT----TCT
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        14999 19 +     17124 T--------A------------T-A-------AA-------CCATGGT------ATGT----T-T
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3082 18 +     43469 T--------A------------A-A--CAGA-GG-------C------------ATGT----TCT
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 2 C 0
s Avahi_laniger.k141_765380                                  49879 20 -     92717 t--------a------------t-a-------aa-------ccatggt------atgt----tct
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              50508 20 +     85213 t--------a------------t-a-------aa-------ccatggt------atgt----tct
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15192159 20 +  23207421 T--------A------------T-A-------AA-------T------AGTAGCATGT----TCT
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2624 20 -     18090 T--------A------------T-A-------AA-------T------AGTAGCATGT----TCT
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26834 20 +     34529 T--------A------------T-A-------AA-------C------AGTAGCACGT----TCT
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    199891 20 -    288883 T--------A------------T-A-------AA-------C------AGTAGCACGT----TCT
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20273096 20 +  48749331 T--------A------------T-A-------AA-------C------AGTAGCACGT----TCT
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1125652 20 -   1948126 T--------A------------T-A-------AA-------C------AGTAGCACGT----TCT
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18083734 20 +  45695690 T--------A------------T-A-------AA-------C------AGTAGCACGT----TCT
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2819401 20 +   4408762 T--------A------------T-A-------AA-------C------AGTAGCACAT----TCT
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9999469  6 -  17673402 t--------a------------a-a-------aa-------------------------------
i Camelus_bactrianus.KN276810.1                          C 0 I 5
s Camelus_dromedarius.KN272107.1                           2331933  6 -   7040546 t--------a------------a-a-------aa-------------------------------
i Camelus_dromedarius.KN272107.1                         C 0 I 5
s Camelus_ferus.KB017975.1                                  400209  6 -   1652518 t--------a------------a-a-------aa-------------------------------
i Camelus_ferus.KB017975.1                               C 0 I 5
s CanFam4.chr16                                           17796339 20 -  60362399 T--------A------------T-G-------AA-------C------AGTGATATGT----TCT
i CanFam4.chr16                                          I 1 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182396 20 -    185531 T--------A------------T-G-------AA-------C------AGTGATATGT----TCT
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 1 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031782 20 -   9314153 t--------a------------t-g-------aa-------c------agtGATATGT----TCT
i Canis_lupus_dingo.QKWQ01000480.1                       I 1 C 0
s Canis_lupus_familiaris.chr16                            17956047 20 -  59632846 t--------a------------t-g-------aa-------c------agtGATATGT----TCT
i Canis_lupus_familiaris.chr16                           I 1 C 0
s Canis_lupus_orion.HG994398.1                            18497347 20 +  63665305 t--------a------------t-g-------aa-------c------agtGATATGT----TCT
i Canis_lupus_orion.HG994398.1                           I 1 C 0
s Capra_aegagrus.CM003241.1                               18830030 20 +  46296322 T--------A------------T-A-------AA-------C------AGTAGCATGT----TCT
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18060750 20 -  44709034 T--------A------------T-A-------AA-------C------AGTAGCATGT----TCT
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           141600 20 -    496798 T--------A------------T-A-------AA-------CCGTGGT------ATGT----TCT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                3445 18 -     11696 T--------A------------A-A--CAGA-GG-------T------------ATGT----TCT
i Carollia_perspicillata.CarPer_scaffold_92756           I 2 C 0
s Castor_canadensis.CasCan_scaffold_2074                    134373 20 +    179628 TTTAAGCAAT------------G-A-------AC-------TA--------------T----TCT
i Castor_canadensis.CasCan_scaffold_2074                 I 4 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89809 20 +    217609 T--------A------------C-A-------AACAGT-AGT------------ATGT----TCC
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         5515 20 -      8605 T--------A------------T-A-------AA-------CCGTGGT------ATGT----TCT
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12228444 20 +  27778364 t--------a------------t-a-------ca---c-agc------agt---atgt----tct
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          3162 20 -      3715 T--------A------------T-A-------CACAG----C---------AGTATGT----TCT
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4471136 20 +   4669795 T--------A------------G-A-------AA-------CCACAGA------ACGT----TCT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         9685 20 -     19203 T--------A------------G-A-------AA-------CCACAGA------ACGT----TCT
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           4106 20 +      8260 C--------A------------G-A-------AA-------CCACAGA------ACGT----TCT
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           4334 20 +     27781 T--------A------------G-A-------AA-------CCACAGA------ACGT----TCT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         4493 20 -     20310 T--------A------------G-A-------AA-------CCACGGA------ACGT----TCT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           7477 20 +     29689 T--------G------------G-A-------AA-------CCACGGA------ACGT----TCT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            1913 20 +      9989 T--------A------------G-A-------AA-------CCACGGA------ACGT----TCT
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          10160 20 -     27936 T--------A------------G-A-------AA-------CCACGGA------ATGT----TCT
i Cercopithecus_hamlyni.k141_187466                      I 3 C 0
s Cercopithecus_lowei.k141_457449                            10187 20 -     11289 T--------A------------G-A-------AA-------CCATGGA------ACGT----TCT
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38812559 20 +  39242232 T--------A------------G-A-------AA-------CCACGGA------ACGT----TCT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21218258 20 -  21565898 T--------A------------G-A-------AA-------CCATGGA------ACGT----TCT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       35377 20 -     53127 T--------A------------G-A-------AA-------CCATGGA------ACGT----TCT
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        2662 20 +      7159 T--------A------------G-A-------AA-------CCACGGA------ACGT----TCT
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       10180 20 -     27947 T--------A------------G-A-------AA-------CCATGGA------ACGT----TCT
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         10156 20 +     17596 T--------A------------G-A-------AA-------CCATGGA------ACGT----TCT
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         40657 20 -     41420 T--------A------------G-A-------AA-------CCATGGA------ACGT----TCT
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            5414 19 -      6351 t-------at------------a-a-------ac-------a------------gtggttgctct
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       I 10 C 0
s Cheirogaleus_major.k141_333249                             17299 20 -     52598 t--------a------------t-a-------aa-------ccatggt------atgt----tct
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12649 20 +     57038 t--------a------------t-a-------aa-------ccatggt------atgt----tct
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chlorocebus_aethiops.ctg25                              18424119 20 -  18827391 T--------A------------G-A-------AA-------CCACGGA------ACGT----TCT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       10560 20 -     50209 T--------A------------G-A-------AA-------CCACGGA------ACGT----TCT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135417568 20 + 135778131 T--------A------------G-A-------AA-------CCACGGA------ACGT----TCT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15708 19 +     19366 T--A-----T------------G-A-------AC-------A------------GTGGTAGCTCT
i Choloepus_didactylus.ChoDid_scaffold_45914             I 10 C 0
s Choloepus_hoffmanni.KN194906.1                            170807 19 +    839153 T--A-----T------------G-A-------AC-------A------------GTGGTAGCTCT
i Choloepus_hoffmanni.KN194906.1                         I 10 C 0
s Colobus_angolensis.KN981557.1                            1906075 20 +   2368649 T--------A------------G-A-------AA-------CCACGGA------ACGC----TCT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199945744 20 + 200372422 T--------A------------G-A-------AA-------CCACGGA------ACGC----TCT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              32616 20 +     84244 T--------A------------G-A-------AA-------CCACGGA------ACGC----TCT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17546866 20 -  53390261 t--------a------------c-a-------aacagT-CAT------------ATGT----TCT
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          11078 20 -     20389 T--------A----------TAA-A--CAGT-AG-------T------------ATGT----TCT
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 46862 12 +     63868 A--------T------------G-G-------AG-------TA--------------T----TCT
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11663849 12 + 224834208 g--------t------------g-g-------aa-------tg--------------t----tct
i Cricetulus_griseus.LT883664.1                          I 11 C 0
s Crocidura_indochinensis.CroInd_scaffold_239572              1905 20 -      5012 T--------T------------T-G-------AA-------C------ATTAATGAGC----TCT
i Crocidura_indochinensis.CroInd_scaffold_239572         I 58 I 165
s Cryptoprocta_ferox.CryFer_flattened_line_16129             25026 13 -     87169 T--------A------------A-G-------AA-------C----------AA---T----TCT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 1
s Dasypus_novemcinctus.JH564415.1                            61683 19 +   2246927 t-------at------------a-a-------ac-------t------------gtGGTAGTTCT
i Dasypus_novemcinctus.JH564415.1                        I 8 C 0
s Daubentonia_madagascariensis.ctg71                      12533461 20 -  12879189 t--------a------------t-a-------aa-------ccatggt------atgt----tct
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811794 20 +  35494412 T--------A------------T-A-------AA-------T------AGTAGCATGT----TCT
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8628475 18 +  20541912 T--------A------------A-A--CAGA-GG-------T------------ATGT----TCT
i Desmodus_rotundus.KZ672289.1                           I 2 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  670297 20 +   1390856 t--------a------------t-a-------aa---c-agT---------AGTATGT----TCT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    3052 20 +    198055 T--------A------------T-A-------CACAG----T---------AGTATGT----TCT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE759718.1                                   7990 20 +     11740 c--------a-t------g---a-aa--a-gtag-------T------------ATAT----TCT
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       311065 20 +    607251 T--------A------------T-A-------AC-------C------AGTAGCATGT----TCT
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          12654 12 -    110024 G--------C------------A-G-------AA-------TA--------------T----TCT
i Ellobius_lutescens.LOEQ01008920.1                      I 10 C 0
s Ellobius_talpinus.LOJH01123422.1                            3604 12 +      5358 T--------C------------A-G-------AA-------TA--------------T----TCT
i Ellobius_talpinus.LOJH01123422.1                       I 10 C 0
s Enhydra_lutris.KZ291758.1                               16326349 20 -  41312741 t--------a------------t-a-------aa-------c------agtGGTATGT----TCT
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1280337 20 +   4378816 T--------A------------T-A-------AGCAG----T---------AGTATAT----TCT
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18528158 20 -  39960074 T--------A------------T-A-------AGCAG----T---------AGTATAT----TCT
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               30173 20 +    498745 T--------A------------T-A-------AGCAG----T---------AGTATAT----TCT
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3326637 12 -   7059049 G--------T------------T-G-------TA-------T--------------AT----TCT
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21200750 20 -  21539334 T--------A------------G-A-------AA-------CCACGGA------ACGT----TCT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11470 20 +    133382 T--------A------------T-A-------AA-------T------AGTAGCATGT----TCT
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             25407 20 -     44125 T--------A------------T-A-------AA-------T------AGTTGCATGT----TCT
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Eulemur_albifrons.k141_342033                               9980 20 -     14127 T--------A------------T-A-------AA-------CCATGTT------ATGT----TCT
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                2678 20 -     16928 T--------A------------T-A-------AA-------CCATGTT------ATGT----TCT
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              11711 20 -     25546 T--------A------------T-A-------AA-------CCATGTT------ATGT----TCT
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             8896 20 +     26330 T--------A------------T-A-------AA-------CCATGTT------ATGT----TCT
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 10153 20 +     23973 T--------A------------T-A-------AA-------CCATGTT------ATGT----TCT
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 8896 20 +     75513 t--------a------------t-a-------aa-------ccatgtt------atgt----tct
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  6848 20 +     97555 t--------a------------t-a-------aa-------ccatgtt------atgt----tct
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                             9774 20 +     26496 t--------a------------t-a-------aa-------ccatgtt------atgt----tct
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                   380 20 -     17153 T--------A------------T-A-------AA-------CCATGTT------ATGT----TCT
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                               9959 20 +    111500 t--------a------------t-a-------aa-------ccatgtt------atgt----tct
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20233994 11 + 206538554 ----------------------T-G-------AA-------C----------AG---T----Tct
i Felis_catus.CM001381.2                                 C 0 I 197
s Felis_catus_fca126.CM031415.1                           20192841 11 + 205367284 ----------------------T-G-------AA-------C----------AG---T----TCT
i Felis_catus_fca126.CM031415.1                          C 0 I 195
s Felis_nigripes.FelNig_flattened_line_20823                  6354 11 -     36744 ----------------------T-G-------AA-------C----------AG---T----TCT
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 194
s Galagoides_demidoff.k141_31856                              3314 29 -      3432 a--------actctctaagagta-g-------aa-------tca--ga------atgt----tt-
i Galagoides_demidoff.k141_31856                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_266699                167 20 +      2098 t--------a------------t-a-------ta-------cagtgct------atgt----tct
i Galeopterus_variegatus.GalVar_scaffold_266699          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     609030 20 -    660261 T--------A------------T-A-------AA-------C------AGCAGCACGT----TCT
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30901 12 +     49224 G--------T------------G-G-------AA-------CG--------------T----TCT
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              11433 20 -     32273 T--------A------------T-A-------AA-------CCATGGA------ACAT----TCT
i Gorilla_beringei.k141_3596273                          I 45 C 0
s Gorilla_gorilla.LT578341.1                             186333581 20 + 186649187 T--------A------------T-A-------AA-------CCATGGA------ACAT----TCT
i Gorilla_gorilla.LT578341.1                             I 45 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   30621 12 +     78134 G--------T------------A-G-------AA-------TA--------------T----TCT
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           3044 20 -     19426 T--------A------------T-A-------AA-------CCATGGT------ATGT----TCT
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              8188 20 -     15286 T--------A------------T-A-------AA-------CCATGGT------ATGT----TCT
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                              9826 20 +     18253 T--------A------------T-A-------AA-------CCATGGT------ATGT----TCT
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                          9929 20 -     41752 t--------a------------t-a-------aa-------ccatggt------atgt----tct
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                          9762 20 -     16460 t--------a------------t-a-------aa-------ccatggt------atgt----tct
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               239086 13 +    327341 T--------A------------T-C-------AA-------C----------AA---T----TCT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18234 20 +     36099 T--------A------------T-A-------AA-------C------AGTAGCATGT----TCT
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108854 20 +   1711038 t--------a-t----a-----a-a--taat-ag-------t------------ATAT----TCT
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               40290 20 +     43066 T--------A----------TAA-A--TACT-AG-------T------------ATAT----TCT
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    430325 20 +    630532 T--------A------------T-A-------AA-------CCATGGA------ACGT----TCT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  41477 13 +     55795 T--------A------------T-G-------AA-------C----------AA---T----TCT
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_307679                               13256 20 -     15490 T--------A------------T-A-------AA-------CCATGGA------ACGT----TCT
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              55262 20 +     67168 T--------A------------T-A-------AA-------CCATGGA------ACGT----TCT
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189538912 20 - 191637585 T--------A------------T-A-------AA-------CCATGGA------ACGT----TCT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3331805 20 -  11177569 T--------A------------T-A-------AA-------CCATGGA------ACGT----TCT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7515151 18 -   7955117 c--------a------------t-t-------aa-------tagtt--------acat----tct
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 1
s Indri_indri.k141_3655594                                   18745 20 +     31101 t--------a------------t-a-------aa-------ctgtggt------atgt----tct
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               23011 20 +     23964 T--------A------------T-A-------AA-------T------AGTAGCATGT----TCT
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8272261 12 -   9596543 G--------T------------G-A-------AA-------GA--------------T---Cta-
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                2369 20 -      3359 T--------A------------T-A-------AA-------T------AGTAGCATGT----TCT
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lemur_catta.scaffold_24                                 15520289 20 -  30322482 t--------a------------t-a-------aa-------ccatggt------atgt----tct
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          7200 20 -     23766 t--------a------------t-a-------aa-------ccgtggt------atgt----tct
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             25147 20 +     45836 t--------a------------t-a-------aa-------ccgtggt------atgt----tct
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         32059 20 -     32627 t--------a------------t-a-------aa-------ccgtggt------atgg----tct
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      23202 20 +     54090 t--------a------------t-a-------aa-------ccgtggt------atgt----tct
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3039498 20 +   3914936 t--------a------------t-g-------aa-------C------AGTGGTATGT----TCT
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             268063 20 -    662738 T--------A------------T-A-------AA-------C------ACTAGCATGT----TCT
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1432681 20 +   1826925 T--------A------------G-A-------AA-------CCACGGA------ACAT----TCT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            1238 20 +     11245 t--------a------------t-a-------aa-------ccatggt------atgt----tct
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1000075 20 +   6120653 t--------a------------t-a-------aa-------ccatggt------atgt----tct
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17952287 20 -  59628241 t--------a------------t-g-------aa-------c------agtgaTATGT----TCT
i Lycaon_pictus.CM007581.1                               I 1 C 0
s Macaca_arctoides.k141_2326796                               2502 20 +     40492 T--------A------------G-A-------AA-------CCACGGA------ATAT----TCT
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59671757 20 +  60120075 T--------A------------G-A-------AA-------CCACGGA------ATAT----TCT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  8257 20 -     26193 T--------A------------G-A-------AA-------CCACGGA------ATAT----TCT
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            76054 20 -    114318 T--------A------------G-A-------AG-------CCACGGA------ACGT----TCT
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  1769 20 -     23192 T--------A------------G-A-------AA-------CCACGGA------ATAT----TCT
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                11222 20 -     29190 T--------A------------G-A-------AA-------CCACGGA------ATAT----TCT
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  19789 20 +     37952 T--------A------------G-A-------AA-------CCACGGA------ATAT----TCT
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834877 20 + 187317192 C--------A------------G-A-------AA-------CCACGGA------ATAT----TCT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25453440 20 -  25927173 T--------A------------G-A-------AA-------CCACGGA------ATAT----TCT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  75638 20 +     89720 T--------A------------G-A-------AA-------CCACGGA------ATAT----TCT
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 2636 20 +     20474 T--------A------------G-A-------AA-------CCACGGA------ATAT----TCT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   2437 20 -     14993 T--------A------------G-A-------AA-------CCACGGA------ATAT----TCT
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  325309 20 -    668171 T--------A------------G-A-------AA-------CCACGGA------ATAT----TCT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                  740 20 -     24072 T--------A------------G-A-------AA-------CCACGGA------ATAT----TCT
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               21376 20 -     45290 T--------A------------G-A-------AA-------CCACGGA------ATAT----TCT
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88088 20 +     94391 a--------a-t------g---a-a---tggtag-------t------------atat----tct
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23932924 20 -  24302211 T--------A------------G-A-------AA-------CCACAGA------ACGT----TCT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               347101 20 +    752769 T--------A------------G-A-------AA-------CCACAGA------ACGT----TCT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              16159 20 +    737560 t--------a------------t-a-------aa-------t------agtactatgt----tct
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              47544 20 -    317179 t--------a------------t-a-------aa-------t------agtactatgt----tct
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33098001 18 -  40650429 c--------a------------t-t-------aa-------tagTT--------ACAT----TCT
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         7359 20 -    207569 T--------G----------TAA-G--CAGT-AG-------T------------ATGT----TCT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              7057 20 +     13704 T--------A------------T-A-------AA-------C------AGTGGTATGT----TCT
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 28149  6 +    140813 -----------------------------------------TA--------------T----TCT
i Meriones_unguiculatus.MerUng_scaffold_7390             I 4 C 0
s Mesocricetus_auratus.KB708134.1                         12178242 12 -  29670104 g--------t------------g-g-------aa-------tg--------------t----tct
i Mesocricetus_auratus.KB708134.1                        I 11 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3679 20 +     10310 T--------A------------T-A-------AA-------T------AGTAGCATGT----TCT
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18287684 20 -  93316391 T--------A------------T-A-------AA-------CCATGGT------ATGT----GCT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                13989 18 -     19307 T--------A------------A-A--CAGA-AA-------T------------ATGT----TCT
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 2 C 0
s Microtus_ochrogaster.CM001695.1                         11256570 12 -  27267610 G--------T------------G-G-------AA-------TA--------------T----CCT
i Microtus_ochrogaster.CM001695.1                        I 10 C 0
s Miopithecus_ogouensis.k141_534055                           4675 20 -     28506 T--------A------------G-A-------AA-------CCACGGA------ACGT----TCT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         2334 20 -      8324 T--------A------------T-G-------AA-------C------AGTGGTATGT----TCT
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      5252 20 -     37649 t--------a------------t-a-------aa-------ccatggt------atgt----gct
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    27184 20 -    437263 T--------A------------T-A-------AA-------T------AGTAGCATGT----TCT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138391 18 -    366855 T--------A------------A-A--CAGA-AG-------T------------ATGT----GCT
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 2 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   1116 20 +     82753 T--------A------------T-A-------AA-------C------AATAGCACTT----TCT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   32180 13 +     37127 T--------A------------T-C-------AA-------C----------AA---T----TCT
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Mus_caroli.LT608237.1                                   84357204 12 - 120012414 G--------T------------A-G-------AA-------TA--------------T----TCT
i Mus_caroli.LT608237.1                                  C 0 I 13
s Mus_musculus.chr8                                       87646177 12 - 129401213 G--------T------------G-G-------GA-------TA--------------T----TCT
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  90748251 12 - 130317789 G--------T------------G-G-------GA-------TA--------------T----TCT
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2933 12 +     14296 T--------A------------T-T-------AA-------TA--------------C----TCT
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 42 C 0
s Mustela_putorius.JH418006.1                               298246 20 -  14710649 t--------a------------t-a-------aa-------c------agtGGTATGT----TCT
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186658 19 +    196477 T--A-----T------------A-A-------AC-------A------------GTGGTAGTTCC
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 10 C 0
s Nannospalax_galili.AXCS01343547.1                            172 12 +       996 G--------T------------G-A-------AC-------TA--------------T----TCT
i Nannospalax_galili.AXCS01343547.1                      C 0 C 0
s Nasalis_larvatus.k141_413338                               10675 20 +     21681 T--------A------------G-A-------AA-------CCACGGA------ACAT----TCT
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5866140 20 +   7148211 T--------A------------T-A-------AA-------T------AGTAGCATGT----TCT
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756945 19 +    783361 t--------a------------a-a-c-a-gaAG---T---T------------ATGT----TCT
i Noctilio_leporinus.NocLep_scaffold_251                 I 2 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146548 20 -   9404916 C--------A------------T-G-------AA-------C------AGTGATATGT----TCT
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 1 C 0
s Nycticebus_bengalensis.LG01                            102575058 20 - 196305487 t--------a------------t-a-------aa-------ccatggt------atat----tct
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2744 20 +      8486 T--------A------------T-A-------AA-------CCATGGT------ATAT----TCT
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105745485 20 + 199412804 t--------a------------t-a-------aa-------ccatggt------atat----tct
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                              503640 20 -   2017862 t--------a------------T-G-------AA-------C------AATGGTATGT----TCT
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         145438 20 +    630418 T--------A------------T-A-------AC-------C------AGTAGCATGT----TCT
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          76947 20 -    150152 T--------A------------T-A-------AA-------C------AGTAGCACGT----TCT
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   16908 12 +     28053 G--------C------------A-G-------AA-------TA--------------T----TCT
i Ondatra_zibethicus.OndZib_scaffold_46174               I 11 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    75010 12 +    102263 G--------T------------G-G-------AA-------TA--------------T----TCT
i Onychomys_torridus.OnyTor_scaffold_2986                I 11 C 0
s Orcinus_orca.KB316932.1                                  2782055 20 -  10937097 T--------A------------T-A-------AA-------T------AGTAGCATGT----TCT
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       459302 20 -    559221 t--------a------------t-g-------aa-------c------agtGATATGT----TCT
i Otocyon_megalotis.JAEUCK010005147.1                    I 1 C 0
s Ovis_aries.CM001607.2                                   17586209 20 +  44047080 T--------A------------T-A-------AA-------C------AGTAGCATGT----TCT
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      174186 20 -    191736 T--------A------------T-A-------AA-------C------AGTAGCATGT----TCT
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    39550 20 +     80009 t--------a------------t-a-------aa-------ccatgga------atat----tCT
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189138443 20 + 189151597 t--------a------------t-a-------aa-------ccatgga------acgT----TCT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  148002 13 +    230217 T--------A------------T-G-------AA-------C----------AG---T----TCT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 193
s Panthera_pardus.KV860321.1                                261209 13 +  18783137 T--------A------------T-G-------AA-------C----------AG---T----Tct
i Panthera_pardus.KV860321.1                             C 0 I 193
s Panthera_tigris.KE722367.1                               4717846 13 -   8748460 T--------A------------T-G-------AA-------C----------AG---T----Tct
i Panthera_tigris.KE722367.1                             C 0 I 193
s Pantholops_hodgsonii.KE114653.1                          1265103 20 -   2937107 T--------A------------T-A-------AA-------C------AGTAGCATGT----TCT
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183438710 20 + 183742232 T--------A------------G-A-------AA-------CCACGGA------ACAT----TCT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             2403 20 +     20448 T--------A------------G-A-------AA-------CCACGGA------ACAT----TCT
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20559208 20 +  20919399 T--------A------------G-A-------AA-------CCACGGA------ACAT----TCT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   1146 20 +     41871 T--------A------------G-A-------AA-------CCACGGA------ACAT----TCT
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     4432 20 +     27711 T--------A------------G-A-------AA-------CCACGGA------ACAT----TCT
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  4517 20 +      9205 T--------A------------G-A-------AA-------CCACGGA------ACAT----TCT
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9660 13 -     78924 T--------A------------T-G-------AA-------A----------AG---T----TCT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 4 C 0
s Perodicticus_ibeanus.k141_855320                            5233 19 +     13100 T--------A------------T-A-------AA-------CCATGGT------ATGT----T-T
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             3606 19 +     25941 t--------a------------t-a-------aa-------ccatggt------aagt----t-t
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18187796 12 -  18517816 G--------T------------G-G-------aa-------ta--------------t----cac
i Peromyscus_maniculatus.KI615324.1                      I 11 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               9102 20 +     63832 T--------A------------T-A-------AA-------T------AGTAGCATGT----TCT
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           39187 20 +     62158 T--------A------------G-A-------AA-------CCACGGA------ACGT----TCT
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33909 20 +     89929 T--------A------------G-A-------AA-------CCACGGA------ACGT----TCT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            35325 20 +     51399 T--------A------------G-A-------AA-------CCACGGA------ACGT----TCT
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14291561 20 -  14605196 T--------A------------G-A-------AA-------CCACGGA------ACGT----TCT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34808 20 +     35617 T--------A------------T-A-------AA-------T------AGTAGCATGT----TCT
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189126635 20 + 189387572 t--------a------------t-a-------aa-------cCACAGA------ACAT----TCT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9566241 20 +   9816681 T--------A------------T-A-------AA-------CCACAGA------ACAT----TCT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68836 20 -     81375 T--------A------------G-A-------AA-------CCACGGA------ACAT----TCT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                               657 20 +     19060 T--------A------------G-A-------AA-------CCACGGA------ACAT----TCT
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2592941 20 -   4620579 T--------A------------T-A-------AA-------CTATGGT------ATGT----Tct
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986954 20 +   2598838 T--------A------------T-A-------AA-------CCATGGT------ATGT----TCT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          25243 20 +     38485 T--------A------------T-A-------AA-------CCATGGT------ATGT----TCT
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             1402 20 +      4256 T--------A------------T-A-------AA-------CCATGGT------ATGT----TCT
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22762 20 +     35766 t--------a------------t-a-------aa-------ccatggt------atgt----tct
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            945 20 -     24134 T--------A------------T-A-------AA-------CCATGGT------ATGT----TCT
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24757 20 -     67325 t--------a------------t-a-------aa-------ccatggt------atgt----tct
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           1002 20 -      6182 T--------A------------T-A-------AA-------CCATGGT------ATGT----TCT
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             5782  6 -     21651 -----------------------------------------TA--------------T----CCT
i Psammomys_obesus.NESX01036370.1                        I 4 C 0
s Pteronotus_parnellii.KE909381.1                            11786 18 -     21811 T--------A------------A-A--CAGA-AG-------A------------ATGA----TCT
i Pteronotus_parnellii.KE909381.1                        I 2 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         37257 20 +     42204 T--------A------------T-A-------AA-------C------AGTGGTATGT----TCT
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22974262 20 +  28871421 c--------a-t------g---a-a-c-a-gtAG-------T------------ATAT----TCT
i Pteropus_alecto.KB030862.1                             I 19 C 0
s Puma_concolor.QAVW01001104.1                            20271137 11 -  38429054 ----------------------T-G-------AA-------C----------AG---T----Tct
i Puma_concolor.QAVW01001104.1                           C 0 I 193
s Pygathrix_cinerea.k141_1153803                             10668 20 -     91421 T--------A------------G-A-------AA-------CCATGGA------ACAT----TCT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7604796 20 +   7812017 T--------A------------G-A-------AA-------CCATGGA------ACAT----TCT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10637 20 -     72585 T--------A------------G-A-------AA-------CCATGGA------ACAT----TCT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5686 20 +     55207 T--------A------------T-A-------AC-------C------AGTAGCATGT----TCT
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53566068 12 +  90668790 G--------T------------G-A-------AA-------TA--------------T----TCT
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        367399 20 -   3329780 T--------A----------TGA-A--CAAT-AG-------T------------ATAT----GCT
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             2352 20 -     11128 T--------A------------G-A-------AA-------CCACGGA------ACAT----TCT
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91231707 20 - 195417433 T--------A------------G-A-------AA-------CCACGGA------ACAT----TCT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7667356 20 +   7961872 T--------A------------G-A-------AA-------CCACGGA------ACAT----TCT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85261 20 -     96226 c--------a-t----a-----a-a---tggtaG-------T------------ATAT----TCT
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151933 17 -    313613 ------------------------A-------AACAGT-AGT------------ATGT----TCT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 1 C 0
s Semnopithecus_entellus.k141_11662                          15180 20 -     19888 T--------A------------G-A-------AA-------CCACGGA------ACAT----TCT
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      22382 20 +     39453 T--------A------------G-A-------AA-------CCACGGA------ACAT----TCT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2908 20 +     27826 T--------A------------G-A-------AA-------CCACGGA------ACAT----TCT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             2429 20 -     19483 T--------A------------G-A-------AA-------CCACGGA------ACAT----TCT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      2491 20 +      7198 T--------A------------G-A-------AA-------CCACGGA------ACAT----TCT
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         10751 20 +     15514 T--------A------------G-A-------AA-------CCACGGA------ACAT----TCT
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            188233 14 -    191337 T--------T------------A-A-------AA-------T------------GTGT----TCT
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13648421 20 -  18376816 t--------t------------t-aaccaag-ag-------t------------aagt----cct
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1948784 18 -   3870691 c--------a------------t-t-------aa-------tagTT--------ACAT----TCT
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27774 20 +     97271 T--------A------------T-G-------AA-------C------AGTGGTATGT----TCT
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 6 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              15087 13 -    196729 T--------A------------T-C-------AA-------C----------AA---T----TCT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.JH118708.1                                      32300 21 -     47482 t--------g------------ttA-------AGTAGT-AGT------------ATGT----TCT
i Sus_scrofa.JH118708.1                                  I 14 C 0
s Symphalangus_syndactylus.tarseq_199                      1088956 20 -   1523678 T--------A------------T-A-------AA-------CCATGGA------ACGT----TCT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 7382 18 +     41958 T--------A------------A-A--CAGA-AG-------T------------ATGT----TCT
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 70012 19 +    116680 T--A-----T------------A-A-------AC-------A------------GTGGTAGTTCT
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 10 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115779 20 -    156842 t--------g------------t-a-------aa---c-aat------agt---atgt----tct
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    384230 20 +    539355 t--------a------------t-a-------aa---c-aat------agt---atgt----tct
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               11213 20 +     70052 c--------a------------t-a-------aa-------ccgtggt------atgt----tct
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               15518 20 +     25099 C--------A------------T-A-------AA-------CCGTGGT------ATGT----TCT
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186423754 20 + 186847797 T--------A------------G-A-------AA-------CCACGGA------ACAT----TCT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   2575 19 +      8208 T--A-----T------------A-C-------AC-------A------------GCGGTAGCTCT
i Tolypeutes_matacus.TolMat_scaffold_228639              I 10 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     79533 18 +    610378 T--------A------------A-A--CAGA-GT-------C------------ATGT----TCT
i Tonatia_saurophila.TonSau_scaffold_294                 I 2 C 0
s Trachypithecus_auratus.k141_722599                          6482 20 -     20410 T--------A------------G-A-------AA-------CCACGGA------ACAT----TCT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    10678 20 +     15221 T--------A------------G-A-------AA-------CCACGGA------ACAT----TCT
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        6583 20 +     19930 T--------A------------G-A-------AA-------CCACGGA------ACAT----TCT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       3013 20 -     19997 T--------A------------G-A-------AA-------CCACGGA------ACAT----TCT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            43132 20 -     60166 T--------A------------G-A-------AA-------CCACGGA------ACAT----TCT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        10605 20 -     27529 T--------A------------G-A-------AA-------CCACGGA------ACAT----TCT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     10545 20 -     18194 T--------A------------G-A-------AA-------CCACGGA------ACAT----TCT
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           4280 20 -     21137 T--------A------------G-A-------AA-------CCACGGA------ACAT----TCT
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    2983 20 -     10723 T--------A------------G-A-------AA-------CCACGGA------ACAT----TCT
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         2135 20 +      9834 T--------A------------G-A-------AA-------CCATGGA------ACAT----TCT
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        20453 20 +     32220 T--------A------------G-A-------AA-------CCACGGA------ACAT----TCT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5934550 20 +   6242583 T--------A------------G-A-------AA-------CCACGGA------ACAT----TCT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        3797 20 +     20839 T--------A------------G-A-------AA-------CCACGGA------ACAT----TCT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                   1360 20 -      1748 T--------A------------T-A-------GA-------C------ATTTGCATGT----TCT
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 C 0
s Tupaia_chinensis.KB320699.1                              2150973 20 +   4065304 c--------a------------g-t-------aa-------cagtggt------atgt----cct
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     4271 20 -     10553 C--------A------------A-A-------AA-------CAGTGGT------ATGT----TCT
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15738302 20 +  33153633 T--------A------------T-A-------AA-------T------AGTAGCATGT----TCT
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   52119 19 -     77625 T--------G------------T-A--------ATA-TCAGT------------GTGT----TCT
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4847502 20 -   5085361 T--------A------------A-G-------AA-------C------AGTGGTATGT----TCT
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   7623 20 +     50397 T--------A------------T-A-------AA-------CCATGGT------ATGT----TCT
i Varecia_rubra.k141_590885                              I 6 C 0
s Varecia_variegata.k141_1128296                              7677 20 +     24756 T--------A------------T-A-------AA-------CCATGGT------ATGT----TCT
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368959  6 -   5488506 t--------a------------a-g-------aa-------------------------------
i Vicugna_pacos.KN270157.1                               C 0 I 5
s Vulpes_lagopus.VulLag_flattened_line_30954                  7962 20 -     43706 C--------A------------T-G-------AA-------C------AGTGATATGT----TCT
i Vulpes_lagopus.VulLag_flattened_line_30954             I 1 C 0
s Xerus_inauris.XerIna_scaffold_48378                        20293 18 -     24430 C--------A------------T-T-------AA-------TAGTG--------ACTT----TCT
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          2210 20 +     86975 T--------A------------T-G-------AA-------C------AATGGTATGT----TCT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      11262 12 +     63895 G--------C------------G-A-------AA-------GA--------------T----TCT
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            11994 20 +     12536 T--------A------------T-A-------AA-------T------AGTAGCATGT----TCT
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Pteropus_vampyrus.KN534172.1                                2207 4483 -      8028 I
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1359220  0 +   3988456 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       2218 2 +     62944 AT
s Acinonyx_jubatus.LLWD01001279.1                           824337 2 -   1699592 at
i Acinonyx_jubatus.LLWD01001279.1                        I 194 I 23
s Acomys_cahirinus.AcoCah_scaffold_12655                     66629 2 +     87051 AT
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507606 2 -  29979442 AC
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 23
s Ailurus_fulgens.LNAC01001112.1                             76390 2 -    347723 AC
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 22
s Allactaga_bullata.AllBul_scaffold_9566                     65910 2 -     89534 AT
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   10197 2 -     52922 AT
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         10128 2 -     28001 AT
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                           574 2 -     18505 AT
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           1423 2 -     12518 AT
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675932 2 -   2318259 GT
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 25
s Anoura_caudifer.AnoCau_scaffold_1412                      183689 2 +    412891 AT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 7
s Antilocapra_americana.AntAmePen_scaffold_12469             98413 2 -    100397 GT
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 I 25
s Aplodontia_rufa.AprRuf_scaffold_68852                       7835 2 +     20879 AT
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        15018 2 +     17124 AT
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3100 2 +     43469 AT
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 7
s Avahi_laniger.k141_765380                                  49899 2 -     92717 at
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              50528 2 +     85213 at
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15192179 2 +  23207421 GT
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 25
s Balaenoptera_bonaerensis.DF707048.1                         2644 2 -     18090 GT
i Balaenoptera_bonaerensis.DF707048.1                    C 0 I 25
s Beatragus_hunteri.BeaHun_scaffold_50177                    26854 2 +     34529 GC
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 25
s Bison_bison.KN261452.1                                    199911 2 -    288883 GT
i Bison_bison.KN261452.1                                 C 0 I 25
s Bos_indicus.CM003047.1                                  20273116 2 +  48749331 GT
i Bos_indicus.CM003047.1                                 C 0 I 25
s Bos_mutus.JH880303.1                                     1125672 2 -   1948126 GT
i Bos_mutus.JH880303.1                                   C 0 I 25
s Bos_taurus.CM000203.6                                   18083754 2 +  45695690 GT
i Bos_taurus.CM000203.6                                  C 0 I 25
s Bubalus_bubalis.KI419123.1                               2819421 2 +   4408762 GT
i Bubalus_bubalis.KI419123.1                             C 0 I 25
s Camelus_bactrianus.KN276810.1                            9999480 2 -  17673402 GT
i Camelus_bactrianus.KN276810.1                          I 5 I 37
s Camelus_dromedarius.KN272107.1                           2331944 2 -   7040546 GT
i Camelus_dromedarius.KN272107.1                         I 5 I 37
s Camelus_ferus.KB017975.1                                  400220 2 -   1652518 GT
i Camelus_ferus.KB017975.1                               I 5 I 37
s CanFam4.chr16                                           17796359 1 -  60362399 A-
i CanFam4.chr16                                          C 0 I 15
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182416 1 -    185531 A-
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 I 15
s Canis_lupus_dingo.QKWQ01000480.1                         9031802 1 -   9314153 A-
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 15
s Canis_lupus_familiaris.chr16                            17956067 1 -  59632846 A-
i Canis_lupus_familiaris.chr16                           C 0 I 15
s Canis_lupus_orion.HG994398.1                            18497367 1 +  63665305 A-
i Canis_lupus_orion.HG994398.1                           C 0 I 15
s Capra_aegagrus.CM003241.1                               18830050 2 +  46296322 GT
i Capra_aegagrus.CM003241.1                              C 0 I 25
s Capra_hircus.CM004588.1                                 18060770 2 -  44709034 GT
i Capra_hircus.CM004588.1                                C 0 I 25
s Carlito_syrichta.NW_007259797.1                           141620 2 -    496798 AT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                3463 2 -     11696 GT
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 7
s Castor_canadensis.CasCan_scaffold_2074                    134393 2 +    179628 AT
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89829 2 +    217609 AT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 37
s Cephalopachus_bancanus.k141_2037105                         5535 2 -      8605 AT
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12228464 2 +  27778364 at
i Ceratotherium_simum.JH767749.1                         C 0 I 23
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          3182 2 -      3715 AT
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 I 23
s Cercocebus_atys.KQ010504.1                               4471156 2 +   4669795 AT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         9705 2 -     19203 AT
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           4126 2 +      8260 AT
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           4354 2 +     27781 AT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         4513 2 -     20310 AT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           7497 2 +     29689 AT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            1933 2 +      9989 AT
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          10180 2 -     27936 AT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                            10207 2 -     11289 AT
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38812579 2 +  39242232 AT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21218278 2 -  21565898 AT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       35397 2 -     53127 AT
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        2682 2 +      7159 AT
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       10200 2 -     27947 AT
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         10176 2 +     17596 AT
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         40677 2 -     41420 AT
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            5433 2 -      6351 at
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             17319 2 -     52598 at
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12669 2 +     57038 at
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chlorocebus_aethiops.ctg25                              18424139 2 -  18827391 AT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       10580 2 -     50209 AT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135417588 2 + 135778131 AT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15727 2 +     19366 AT
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170826 2 +    839153 AT
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1906095 2 +   2368649 AT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199945764 2 + 200372422 AT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              32636 2 +     84244 AT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17546886 2 -  53390261 AT
i Condylura_cristata.JH655891.1                          C 0 I 23
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          11098 2 -     20389 GT
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 33
s Cricetomys_gambianus.CriGam_scaffold_18520                 46874 2 +     63868 AT
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11663861 2 + 224834208 at
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_287352              1072 2 +      4208 CT
i Crocidura_indochinensis.CroInd_scaffold_287352         I 104 I 23
s Cryptoprocta_ferox.CryFer_flattened_line_16129             25040 1 -     87169 -T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 1 I 272
s Dasypus_novemcinctus.JH564415.1                            61702 2 +   2246927 AT
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12533481 2 -  12879189 at
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811814 2 +  35494412 GT
i Delphinapterus_leucas.KZ290073.1                       C 0 I 25
s Desmodus_rotundus.KZ672289.1                             8628493 2 +  20541912 AT
i Desmodus_rotundus.KZ672289.1                           C 0 I 7
s Dicerorhinus_sumatrensis.PEKH010002091.1                  670317 2 +   1390856 AT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 23
s Diceros_bicornis.DicBicMic_scaffold_5955                    3072 2 +    198055 AT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 23
s Eidolon_helvum.KE759718.1                                   8010 2 +     11740 AT
i Eidolon_helvum.KE759718.1                              C 0 I 33
s Elaphurus_davidianus.JRFZ01104969.1                       311085 2 +    607251 AT
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 25
s Ellobius_lutescens.LOEQ01008920.1                          12666 2 -    110024 GT
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01123422.1                            3616 2 +      5358 GG
i Ellobius_talpinus.LOJH01123422.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16326369 2 -  41312741 AT
i Enhydra_lutris.KZ291758.1                              C 0 I 23
s Equus_asinus.JREZ01000139.1                              1280357 2 +   4378816 AG
i Equus_asinus.JREZ01000139.1                            C 0 I 23
s Equus_caballus.CM000403.2                               18528178 2 -  39960074 AG
i Equus_caballus.CM000403.2                              C 0 I 23
s Equus_przewalskii.KK951119.1                               30193 2 +    498745 AG
i Equus_przewalskii.KK951119.1                           C 0 I 23
s Erinaceus_europaeus.JH835339.1                           3326649 2 -   7059049 AT
i Erinaceus_europaeus.JH835339.1                         C 0 I 33
s Erythrocebus_patas.Contig38                             21200770 2 -  21539334 AT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11490 2 +    133382 GT
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 25
s Eubalaena_japonica.EubJap_flattened_line_31514             25427 2 -     44125 GT
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 I 25
s Eulemur_albifrons.k141_342033                              10000 2 -     14127 AT
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                2698 2 -     16928 AT
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              11731 2 -     25546 AT
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             8916 2 +     26330 AT
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 10173 2 +     23973 AT
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 8916 2 +     75513 at
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  6868 2 +     97555 at
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                             9794 2 +     26496 at
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                   400 2 -     17153 AT
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                               9979 2 +    111500 at
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20234202 2 + 206538554 at
i Felis_catus.CM001381.2                                 I 197 I 23
s Felis_catus_fca126.CM031415.1                           20193047 2 + 205367284 at
i Felis_catus_fca126.CM031415.1                          I 195 I 23
s Felis_nigripes.FelNig_flattened_line_20823                  6559 2 -     36744 AT
i Felis_nigripes.FelNig_flattened_line_20823             I 194 I 23
s Galeopterus_variegatus.GalVar_scaffold_266699                187 2 +      2098 at
i Galeopterus_variegatus.GalVar_scaffold_266699          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     609050 2 -    660261 GT
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 I 25
s Glis_glis.GliGli_scaffold_19807                            30913 2 +     49224 AT
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              11453 2 -     32273 AT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186333601 2 + 186649187 AT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   30633 2 +     78134 AT
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           3064 2 -     19426 AT
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              8208 2 -     15286 AT
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                              9846 2 +     18253 AT
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                          9949 2 -     41752 at
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                          9782 2 -     16460 at
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               239099 2 +    327341 AT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 23
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18254 2 +     36099 GT
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 I 25
s Hipposideros_armiger.JXIK01000431.1                       108874 2 +   1711038 AC
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 33
s Hipposideros_galeritus.HipGal_scaffold_29171               40310 2 +     43066 AC
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 I 33
s Hoolock_leuconedys.ctg274                                    430345 2 +    630532 AT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  41490 2 +     55795 AT
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 23
s Hylobates_agilis.k141_307679                               13276 2 -     15490 AT
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              55282 2 +     67168 AT
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189538932 2 - 191637585 AT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3331825 2 -  11177569 AT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7515170 2 -   7955117 ac
i Ictidomys_tridecemlineatus.JH393364.1                  I 1 C 0
s Indri_indri.k141_3655594                                   18765 2 +     31101 at
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               23031 2 +     23964 GT
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 I 25
s Jaculus_jaculus.JH725527.1                               8272273 1 -   9596543 -t
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                2389 2 -      3359 GT
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 I 25
s Lemur_catta.scaffold_24                                 15520309 2 -  30322482 at
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          7220 2 -     23766 gt
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             25167 2 +     45836 at
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         32079 2 -     32627 at
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      23222 2 +     54090 at
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3039518 2 +   3914936 AT
i Leptonychotes_weddellii.KB714746.1                     C 0 I 23
s Lipotes_vexillifer.KE559953.1                             268083 2 -    662738 GT
i Lipotes_vexillifer.KE559953.1                          C 0 I 25
s Lophocebus_aterrimus.ctg367                              1432701 2 +   1826925 AT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            1258 2 +     11245 at
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1000095 2 +   6120653 at
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17952307 1 -  59628241 A-
i Lycaon_pictus.CM007581.1                               C 0 I 15
s Macaca_arctoides.k141_2326796                               2522 2 +     40492 AT
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59671777 2 +  60120075 AT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  8277 2 -     26193 AT
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            76074 2 -    114318 AT
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  1789 2 -     23192 AT
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                11242 2 -     29190 AT
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  19809 2 +     37952 AT
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834897 2 + 187317192 AT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25453460 2 -  25927173 AT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  75658 2 +     89720 AT
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 2656 2 +     20474 AT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   2457 2 -     14993 AT
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  325329 2 -    668171 AT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                  760 2 -     24072 AT
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               21396 2 -     45290 AT
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88108 2 +     94391 at
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 24
s Mandrillus_leucophaeus.scaffold280                      23932944 2 -  24302211 AT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               347121 2 +    752769 AT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              16179 2 +    737560 at
i Manis_javanica.JSZB01003497.1                          C 0 I 23
s Manis_pentadactyla.KN006162.1                              47564 2 -    317179 at
i Manis_pentadactyla.KN006162.1                          C 0 I 23
s Marmota_marmota.CZRN01000018.1                          33098019 2 -  40650429 AC
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         7379 2 -    207569 AT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 33
s Mellivora_capensis.MelCap_flattened_line_69365              7077 2 +     13704 GT
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 23
s Meriones_unguiculatus.MerUng_scaffold_7390                 28155 2 +    140813 AT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12178254 2 -  29670104 at
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3699 2 +     10310 GT
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 I 25
s Microcebus_murinus.CM007674.1                           18287704 2 -  93316391 AT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                14007 2 -     19307 AT
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 7
s Microtus_ochrogaster.CM001695.1                         11256582 2 -  27267610 GT
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miopithecus_ogouensis.k141_534055                           4695 2 -     28506 AT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         2354 2 -      8324 AT
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 23
s Mirza_zaza.k141_952172                                      5272 2 -     37649 at
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    27204 2 -    437263 GT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 25
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138409 2 -    366855 GT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 24
s Moschus_moschiferus.MosMos_scaffold_13123                   1136 2 +     82753 GT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 23
s Mungos_mungo.MunMun_flattened_line_23663                   32193 2 +     37127 AT
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 23
s Mus_caroli.LT608231.1                                   16085651 2 + 120003353 AT
i Mus_caroli.LT608231.1                                  I 61 C 0
s Mus_musculus.chr8                                       87646189 2 - 129401213 AC
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  90748263 2 - 130317789 AC
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2945 2 +     14296 AT
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               298266 2 -  14710649 AT
i Mustela_putorius.JH418006.1                            C 0 I 23
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186677 2 +    196477 AT
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.AXCS01343547.1                            184 2 +       996 GT
i Nannospalax_galili.AXCS01343547.1                      C 0 C 0
s Nasalis_larvatus.k141_413338                               10695 2 +     21681 AT
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5866160 2 +   7148211 GT
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 25
s Noctilio_leporinus.NocLep_scaffold_251                    756964 2 +    783361 AT
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 20
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146568 1 -   9404916 A-
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 15
s Nycticebus_bengalensis.LG01                            102575078 2 - 196305487 at
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2764 2 +      8486 AT
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105745505 2 + 199412804 at
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                              503660 2 -   2017862 AT
i Odobenus_rosmarus.KB229312.1                           C 0 I 23
s Odocoileus_virginianus.KZ100018.1                         145458 2 +    630418 AT
i Odocoileus_virginianus.KZ100018.1                      C 0 I 25
s Okapia_johnstoni.LVCL01S0005463.1                          76967 2 -    150152 GT
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 25
s Ondatra_zibethicus.OndZib_scaffold_46174                   16920 2 +     28053 GT
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    75022 2 +    102263 AT
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2782075 2 -  10937097 GT
i Orcinus_orca.KB316932.1                                C 0 I 33
s Otocyon_megalotis.JAEUCK010005147.1                       459322 1 -    559221 A-
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 15
s Ovis_aries.CM001607.2                                   17586229 2 +  44047080 GT
i Ovis_aries.CM001607.2                                  C 0 I 25
s Ovis_canadensis.OviCan_scaffold_2572                      174206 2 -    191736 GT
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 I 25
s Pan_paniscus.KQ411613.1                                    39570 2 +     80009 AT
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189138463 2 + 189151597 AT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  148208 2 +    230217 AT
i Panthera_onca.PanOnc_flattened_line_3271               I 193 I 23
s Panthera_pardus.KV860321.1                                261415 2 +  18783137 at
i Panthera_pardus.KV860321.1                             I 193 I 23
s Panthera_tigris.KE722367.1                               4718052 2 -   8748460 at
i Panthera_tigris.KE722367.1                             I 193 I 23
s Pantholops_hodgsonii.KE114653.1                          1265123 2 -   2937107 GT
i Pantholops_hodgsonii.KE114653.1                        C 0 I 25
s Papio_anubis.CM001495.2                                183438730 2 + 183742232 AT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             2423 2 +     20448 AT
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20559228 2 +  20919399 AT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   1166 2 +     41871 AT
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     4452 2 +     27711 AT
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  4537 2 +      9205 AT
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9673 2 -     78924 AT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 23
s Perodicticus_ibeanus.k141_855320                            5252 2 +     13100 AT
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             3625 2 +     25941 at
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18187808 2 -  18517816 at
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               9122 2 +     63832 GT
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 25
s Piliocolobus_badius.k141_1234363                           39207 2 +     62158 AT
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33929 2 +     89929 AT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            35345 2 +     51399 AT
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14291581 2 -  14605196 AT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34828 2 +     35617 GT
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 I 25
s Pongo_abelii.CM009266.2                                189126655 2 + 189387572 AT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9566261 2 +   9816681 AT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68856 2 -     81375 AT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                               677 2 +     19060 AT
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2592961 2 -   4620579 at
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986974 2 +   2598838 AT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          25263 2 +     38485 AT
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             1422 2 +      4256 AT
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22782 2 +     35766 at
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            965 2 -     24134 AT
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24777 2 -     67325 at
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           1022 2 -      6182 AT
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             5788 2 -     21651 AT
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11804 2 -     21811 AT
i Pteronotus_parnellii.KE909381.1                        C 0 I 20
s Pteronura_brasiliensis.PteBra_flattened_line_31117         37277 2 +     42204 AT
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 23
s Pteropus_alecto.KB030862.1                              22974282 2 +  28871421 AT
i Pteropus_alecto.KB030862.1                             C 0 I 33
s Puma_concolor.QAVW01001104.1                            20271341 2 -  38429054 at
i Puma_concolor.QAVW01001104.1                           I 193 I 23
s Pygathrix_cinerea.k141_1153803                             10688 2 -     91421 AT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7604816 2 +   7812017 AT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10657 2 -     72585 AT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5706 2 +     55207 AT
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 25
s Rattus_norvegicus.chr16                                 53566080 2 +  90668790 AT
i Rattus_norvegicus.chr16                                C 0 I 5
s Rhinolophus_sinicus.LVEH01000134.1                        367419 2 -   3329780 AT
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 33
s Rhinopithecus_bieti.k119_217274                             2372 2 -     11128 AT
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91231727 2 - 195417433 AT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7667376 2 +   7961872 AT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85281 2 -     96226 GT
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 33
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151950 2 -    313613 AA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 23
s Semnopithecus_entellus.k141_11662                          15200 2 -     19888 AT
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      22402 2 +     39453 AT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2928 2 +     27826 AT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             2449 2 -     19483 AT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      2511 2 +      7198 AT
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         10771 2 +     15514 AT
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            188247 2 -    191337 AT
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 I 23
s Sorex_araneus.JH798187.1                                13648441 2 -  18376816 at
i Sorex_araneus.JH798187.1                               C 0 I 27
s Spermophilus_dauricus.KZ294078.1                         1948802 2 -   3870691 AC
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27794 2 +     97271 AT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 23
s Suricata_suricatta.SurSur_flattened_line_6629              15100 2 -    196729 AT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 23
s Sus_scrofa.JH118708.1                                      32321 2 -     47482 GT
i Sus_scrofa.JH118708.1                                  C 0 I 37
s Symphalangus_syndactylus.tarseq_199                      1088976 2 -   1523678 AT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 7400 2 +     41958 GT
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 20
s Tamandua_tetradactyla.TamTet_scaffold_1782                 70031 2 +    116680 AT
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115799 2 -    156842 at
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 23
s Tapirus_terrestris.TapTer_scaffold_755                    384250 2 +    539355 at
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 23
s Tarsius_lariang.k141_2201908                               11233 2 +     70052 at
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               15538 2 +     25099 AT
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186423774 2 + 186847797 AT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   2594 2 +      8208 AT
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     79551 2 +    610378 GT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 7
s Trachypithecus_auratus.k141_722599                          6502 2 -     20410 AT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    10698 2 +     15221 AT
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        6603 2 +     19930 AT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       3033 2 -     19997 AT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            43152 2 -     60166 AT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        10625 2 -     27529 AT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     10565 2 -     18194 AT
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           4300 2 -     21137 AT
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    3003 2 -     10723 AT
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         2155 2 +      9834 AT
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        20473 2 +     32220 AT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5934570 2 +   6242583 AT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        3817 2 +     20839 AT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                   1380 2 -      1748 AC
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 I 25
s Tupaia_chinensis.KB320699.1                              2150993 2 +   4065304 gt
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     4291 2 -     10553 GT
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15738322 2 +  33153633 GT
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 25
s Uropsilus_gracilis.UroGra_scaffold_12083                   52138 2 -     77625 AT
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 23
s Ursus_maritimus.KK499267.1                               4847522 2 -   5085361 AC
i Ursus_maritimus.KK499267.1                             C 0 I 23
s Varecia_rubra.k141_590885                                   7643 2 +     50397 AT
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              7697 2 +     24756 AT
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5368970 2 -   5488506 at
i Vicugna_pacos.KN270157.1                               I 5 I 37
s Vulpes_lagopus.VulLag_flattened_line_30954                  7982 1 -     43706 A-
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 15
s Xerus_inauris.XerIna_scaffold_48378                        20311 2 -     24430 GC
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          2230 2 +     86975 AT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 23
s Zapus_hudsonius.ZapHud_scaffold_11398                      11274 2 +     63895 AT
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            12014 2 +     12536 GT
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 I 25
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906 0 -     10935 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937 0 +    114563 C
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Pteropus_vampyrus.KN534172.1                                2207 4483 -      8028 I
e Procavia_capensis.ProCapCap_scaffold_85530                 10240 0 -     22811 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823 1 +     22620 I
e Petromus_typicus.PetTyp_scaffold_42190                     26813 0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1359220 0 +   3988456 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016 1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456 1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390 1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692 1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520 1 +     14753 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686 0 +   8254450 C
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Loxodonta_africana.GL010049.1                            4214777 0 -  43346337 C
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Hystrix_cristata.HysCri_scaffold_5660                      81626 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547 0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491 0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051 0 +  22651954 C
e Galagoides_demidoff.k141_31856                              3343 0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eptesicus_fuscus.JH977646.1                              2144447 1 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1089268 0 +  10337057 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084 0 +     67921 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Chinchilla_lanigera.JH722012.1                           1251498 0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157 0 -  23392119 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       2220  5 +     62944 A-----A---T------------A------------A
s Acinonyx_jubatus.LLWD01001279.1                           824362  4 -   1699592 A-----T---A------------T-------------
i Acinonyx_jubatus.LLWD01001279.1                        I 23 I 12
s Acomys_cahirinus.AcoCah_scaffold_12655                     66631  5 +     87051 A-----G---T------------A------------A
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507631  4 -  29979442 A-----T---A------------T-------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 23 I 12
s Ailurus_fulgens.LNAC01001112.1                             76414  4 -    347723 A-----T---A------------T-------------
i Ailurus_fulgens.LNAC01001112.1                         I 22 I 12
s Allactaga_bullata.AllBul_scaffold_9566                     65912  4 -     89534 A-----A---T------------A-------------
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   10199  5 -     52922 A-----A---T------------A------------A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         10130  5 -     28001 A-----A---T------------A------------A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                           576  5 -     18505 A-----A---T------------A------------A
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           1425  5 -     12518 G-----A---T------------A------------A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675959 17 -   2318259 A-----GTTCG------------A--TAATCATTC-T
i Ammotragus_lervia.NIVO01071767.1                       I 25 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             98440 17 -    100397 A-----GTTTG------------A--TAATTATTC-T
i Antilocapra_americana.AntAmePen_scaffold_12469         I 25 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7837  5 +     20879 A-----A---T------------A------------A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        15020  5 +     17124 A-----A---T------------G------------A
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Avahi_laniger.k141_765380                                  49901  5 -     92717 a-----a---t------------a------------a
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              50530  5 +     85213 a-----a---t------------a------------a
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15192206  7 +  23207421 AGTTTTA------------------------------
i Balaenoptera_acutorostrata.KI537508.1                  I 25 I 10
s Balaenoptera_bonaerensis.DF707048.1                         2671  7 -     18090 AGTTTTA------------------------------
i Balaenoptera_bonaerensis.DF707048.1                    I 25 I 10
s Beatragus_hunteri.BeaHun_scaffold_50177                    26881 17 +     34529 A-----GTTTG------------A--TAATTATTT-T
i Beatragus_hunteri.BeaHun_scaffold_50177                I 25 C 0
s Bison_bison.KN261452.1                                    199938 17 -    288883 A-----GTTGG------------A--TAATTATTC-T
i Bison_bison.KN261452.1                                 I 25 C 0
s Bos_indicus.CM003047.1                                  20273143 17 +  48749331 A-----GTTGG------------A--TAATTANTC-T
i Bos_indicus.CM003047.1                                 I 25 C 0
s Bos_mutus.JH880303.1                                     1125699 17 -   1948126 A-----GTTGG------------A--TAATTATTC-T
i Bos_mutus.JH880303.1                                   I 25 C 0
s Bos_taurus.CM000203.6                                   18083781 17 +  45695690 A-----GTTGG------------A--TAATTATTC-T
i Bos_taurus.CM000203.6                                  I 25 C 0
s Bubalus_bubalis.KI419123.1                               2819448 17 +   4408762 A-----GTTGG------------A--TAATTATTC-T
i Bubalus_bubalis.KI419123.1                             I 25 C 0
s Camelus_bactrianus.KN276810.1                            9999519  5 -  17673402 A-----C---A------------C------------T
i Camelus_bactrianus.KN276810.1                          I 37 C 0
s Camelus_dromedarius.KN272107.1                           2331983  5 -   7040546 A-----C---A------------C------------T
i Camelus_dromedarius.KN272107.1                         I 37 C 0
s Camelus_ferus.KB017975.1                                  400259  5 -   1652518 A-----C---A------------C------------T
i Camelus_ferus.KB017975.1                               I 37 C 0
s CanFam4.chr16                                           17796375  4 -  60362399 A-----T---A------------T-------------
i CanFam4.chr16                                          I 15 I 12
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182432  4 -    185531 A-----T---A------------T-------------
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 15 I 12
s Canis_lupus_dingo.QKWQ01000480.1                         9031818  4 -   9314153 a-----t---a------------t-------------
i Canis_lupus_dingo.QKWQ01000480.1                       I 15 I 12
s Canis_lupus_familiaris.chr16                            17956083  4 -  59632846 a-----t---a------------t-------------
i Canis_lupus_familiaris.chr16                           I 15 I 12
s Canis_lupus_orion.HG994398.1                            18497383  4 +  63665305 a-----t---a------------t-------------
i Canis_lupus_orion.HG994398.1                           I 15 I 12
s Capra_aegagrus.CM003241.1                               18830077 17 +  46296322 A-----GTTCG------------A--TAATCATTC-T
i Capra_aegagrus.CM003241.1                              I 25 C 0
s Capra_hircus.CM004588.1                                 18060797 17 -  44709034 A-----GTTCG------------A--TAATCATTC-T
i Capra_hircus.CM004588.1                                I 25 C 0
s Carlito_syrichta.NW_007259797.1                           141622  5 -    496798 A-----A---T------------G------------A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    134395  5 +    179628 A-----A---T------------A------------A
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89868  5 +    217609 A-----T---A------------C------------T
i Catagonus_wagneri.CatWag_scaffold_2839                 I 37 C 0
s Cephalopachus_bancanus.k141_2037105                         5537  5 -      8605 A-----A---T------------G------------A
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12228489 16 +  27778364 a-----t---a------------taacagtagtat-g
i Ceratotherium_simum.JH767749.1                         I 23 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          3207 16 -      3715 A-----T---A------------TAACAGTAGTAT-G
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     I 23 C 0
s Cercocebus_atys.KQ010504.1                               4471158  5 +   4669795 A-----A---T------------A------------A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         9707  5 -     19203 A-----A---T------------A------------A
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           4128  5 +      8260 A-----A---T------------A------------A
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           4356  5 +     27781 A-----A---T------------A------------A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         4515  5 -     20310 A-----A---T------------A------------A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           7499  5 +     29689 A-----A---T------------A------------A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            1935  5 +      9989 A-----A---T------------A------------A
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          10182  5 -     27936 A-----A---T------------A------------A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                            10209  5 -     11289 A-----A---T------------A------------A
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38812581  5 +  39242232 A-----A---T------------A------------A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21218280  5 -  21565898 A-----A---T------------A------------A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       35399  5 -     53127 A-----A---T------------A------------A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        2684  5 +      7159 A-----A---T------------A------------A
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       10202  5 -     27947 A-----A---T------------A------------A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         10178  5 +     17596 A-----A---T------------A------------A
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         40679  5 -     41420 A-----A---T------------A------------A
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            5435  5 -      6351 a-----a---a------------a------------g
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             17321  5 -     52598 a-----a---t------------a------------a
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12671  5 +     57038 a-----a---t------------a------------a
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chlorocebus_aethiops.ctg25                              18424141  5 -  18827391 A-----A---T------------A------------A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       10582  6 -     50209 A-----A---T-A----------A------------A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135417590  3 + 135778131 A-----A---T--------------------------
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15729  5 +     19366 A-----A---T------------A------------G
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170828  5 +    839153 A-----A---T------------A------------G
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1906097  5 +   2368649 A-----A---T------------A------------A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199945766  5 + 200372422 A-----A---T------------A------------A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              32638  5 +     84244 A-----A---T------------A------------A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17546911 16 -  53390261 A-----C---AGAAATATAACA-T------------G
i Condylura_cristata.JH655891.1                          I 23 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          11133  6 -     20389 A----AG---A------------T------------A
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 33 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 46876  5 +     63868 A-----A---T------------G------------A
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11663863  5 + 224834208 a-----g---t------------g------------a
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_287352              1097  4 +      4208 ------T---A------------T------------A
i Crocidura_indochinensis.CroInd_scaffold_287352         I 23 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             25313  4 -     87169 A-----T---A------------T-------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 272 I 12
s Dasypus_novemcinctus.JH564415.1                            61704  5 +   2246927 a-----a---a------------a------------g
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12533483  5 -  12879189 a-----a---t------------a------------a
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811841  7 +  35494412 AGTTTTA------------------------------
i Delphinapterus_leucas.KZ290073.1                       I 25 I 10
s Dicerorhinus_sumatrensis.PEKH010002091.1                  670342 16 +   1390856 A-----T---A------------TAACAGTAGTAT-G
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 23 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    3097 16 +    198055 A-----T---A------------TAACAGTAGTGT-G
i Diceros_bicornis.DicBicMic_scaffold_5955               I 23 C 0
s Eidolon_helvum.KE759718.1                                   8045  1 +     11740 A------------------------------------
i Eidolon_helvum.KE759718.1                              I 33 I 3
s Elaphurus_davidianus.JRFZ01104969.1                       311112 17 +    607251 A-----GTTTG------------A--TAACCATTC-T
i Elaphurus_davidianus.JRFZ01104969.1                    I 25 C 0
s Ellobius_lutescens.LOEQ01008920.1                          12668  5 -    110024 A-----G---T------------G------------T
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01123422.1                            3618  5 +      5358 A-----G---T------------G------------T
i Ellobius_talpinus.LOJH01123422.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16326394  4 -  41312741 A-----T---A------------G-------------
i Enhydra_lutris.KZ291758.1                              I 23 I 12
s Equus_asinus.JREZ01000139.1                              1280382 16 +   4378816 A-----T---A------------GAACTGTAATAT-G
i Equus_asinus.JREZ01000139.1                            I 23 C 0
s Equus_caballus.CM000403.2                               18528203 16 -  39960074 A-----T---A------------GAACTGTAATAT-G
i Equus_caballus.CM000403.2                              I 23 C 0
s Equus_przewalskii.KK951119.1                               30218 16 +    498745 A-----T---A------------GAACTGTAATAT-G
i Equus_przewalskii.KK951119.1                           I 23 C 0
s Erinaceus_europaeus.JH835339.1                           3326684  6 -   7059049 AG----T---A------------A------------G
i Erinaceus_europaeus.JH835339.1                         I 33 C 0
s Erythrocebus_patas.Contig38                             21200772  5 -  21539334 A-----A---T------------A------------A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11517  7 +    133382 AGTTTTA------------------------------
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 25 I 10
s Eubalaena_japonica.EubJap_flattened_line_31514             25454  7 -     44125 AGTTTTA------------------------------
i Eubalaena_japonica.EubJap_flattened_line_31514         I 25 I 10
s Eulemur_albifrons.k141_342033                              10002  5 -     14127 A-----A---T------------A------------T
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                2700  5 -     16928 A-----A---T------------A------------T
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              11733  5 -     25546 A-----G---T------------A------------T
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             8918  5 +     26330 A-----G---T------------A------------T
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 10175  5 +     23973 A-----A---T------------A------------T
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 8918  5 +     75513 a-----g---t------------a------------t
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  6870  5 +     97555 a-----a---t------------a------------t
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                             9796  5 +     26496 g-----a---t------------a------------t
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                   402  5 -     17153 A-----A---T------------A------------T
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                               9981  5 +    111500 a-----a---t------------a------------t
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20234227  4 + 206538554 A-----T---A------------T-------------
i Felis_catus.CM001381.2                                 I 23 I 12
s Felis_catus_fca126.CM031415.1                           20193072  4 + 205367284 A-----T---A------------T-------------
i Felis_catus_fca126.CM031415.1                          I 23 I 12
s Felis_nigripes.FelNig_flattened_line_20823                  6584  4 -     36744 A-----T---A------------T-------------
i Felis_nigripes.FelNig_flattened_line_20823             I 23 I 12
s Galagoides_demidoff.k141_31856                              3343  3 -      3432 ----------t------------a------------a
i Galagoides_demidoff.k141_31856                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_266699                189  5 +      2098 a-----a---t------------a------------a
i Galeopterus_variegatus.GalVar_scaffold_266699          C 0 I 6
s Giraffa_tippelskirchi.LVKQ01S007888.1                     609077 17 -    660261 A-----GTTTG------------C--TAATTCTTC-T
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 25 C 0
s Glis_glis.GliGli_scaffold_19807                            30915  5 +     49224 A-----A---T------------A------------A
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              11455  5 -     32273 A-----A---T------------A------------A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186333603  5 + 186649187 A-----A---T------------A------------A
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   30635  5 +     78134 A-----A---T------------A------------A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           3066  5 -     19426 A-----A---T------------A------------A
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              8210  5 -     15286 A-----A---T------------A------------A
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                              9848  5 +     18253 A-----A---T------------A------------A
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                          9951  5 -     41752 a-----a---t------------a------------a
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                          9784  5 -     16460 a-----a---t------------a------------a
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               239124  4 +    327341 A-----T---A------------T-------------
i Helogale_parvula.HelPar_flattened_line_2585            I 23 I 12
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18281 17 +     36099 A-----GTTCA------------A--TAATTATTC-T
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 25 C 0
s Hipposideros_armiger.JXIK01000431.1                       108909  6 +   1711038 a----gt---a------------t------------A
i Hipposideros_armiger.JXIK01000431.1                    I 33 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               40345  6 +     43066 AG----T---A------------T------------A
i Hipposideros_galeritus.HipGal_scaffold_29171           I 33 C 0
s Hoolock_leuconedys.ctg274                                    430347  5 +    630532 A-----A---T------------A------------A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  41515  4 +     55795 A-----T---A------------T-------------
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 23 I 12
s Hylobates_agilis.k141_307679                               13278  5 -     15490 A-----A---T------------A------------A
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              55284  5 +     67168 A-----A---T------------A------------A
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189538934  5 - 191637585 A-----A---T------------A------------A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3331827  5 -  11177569 A-----A---T------------A------------A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7515172  5 -   7955117 a-----a---t------------a------------A
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   18767  5 +     31101 a-----a---t------------a------------a
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               23058  7 +     23964 AGTTTTA------------------------------
i Inia_geoffrensis.IniGeo_flattened_line_48101           I 25 I 10
s Jaculus_jaculus.JH725527.1                               8272274  4 -   9596543 a-----a---t------------a-------------
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                2416  7 -      3359 AGTTTTA------------------------------
i Kogia_breviceps.KogBre_flattened_line_192630           I 25 I 10
s Lemur_catta.scaffold_24                                 15520311  5 -  30322482 a-----a---t------------a------------a
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          7222  5 -     23766 a-----a---t------------a------------a
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             25169  5 +     45836 a-----a---t------------a------------a
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         32081  5 -     32627 a-----a---t------------a------------a
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      23224  5 +     54090 a-----a---t------------a------------a
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3039543  4 +   3914936 A-----T---A------------T-------------
i Leptonychotes_weddellii.KB714746.1                     I 23 I 12
s Lipotes_vexillifer.KE559953.1                             268110  7 -    662738 AGTTTTA------------------------------
i Lipotes_vexillifer.KE559953.1                          I 25 I 10
s Lophocebus_aterrimus.ctg367                              1432703  5 +   1826925 A-----A---T------------A------------A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            1260  5 +     11245 a-----a---t------------a------------a
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1000097  5 +   6120653 a-----a---t------------a------------a
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17952323  4 -  59628241 a-----t---a------------t-------------
i Lycaon_pictus.CM007581.1                               I 15 I 12
s Macaca_arctoides.k141_2326796                               2524  5 +     40492 A-----A---T------------A------------A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59671779  5 +  60120075 A-----A---T------------A------------A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  8279  5 -     26193 A-----A---T------------A------------A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            76076  5 -    114318 A-----A---T------------A------------A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  1791  5 -     23192 A-----A---T------------A------------A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                11244  5 -     29190 A-----A---T------------A------------A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  19811  5 +     37952 A-----A---T------------A------------A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834899  5 + 187317192 A-----A---T------------A------------A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25453462  5 -  25927173 A-----A---T------------A------------A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  75660  5 +     89720 A-----A---T------------A------------A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 2658  5 +     20474 A-----A---T------------A------------A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   2459  5 -     14993 A-----A---T------------A------------A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  325331  5 -    668171 A-----A---T------------A------------A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                  762  5 -     24072 A-----A---T------------A------------A
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               21398  5 -     45290 A-----A---T------------A------------A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88134  1 +     94391 a------------------------------------
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 24 I 3
s Mandrillus_leucophaeus.scaffold280                      23932946  5 -  24302211 A-----A---T------------A------------A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               347123  5 +    752769 A-----A---T------------A------------A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              16204  4 +    737560 a-----t---a------------t-------------
i Manis_javanica.JSZB01003497.1                          I 23 I 8
s Manis_pentadactyla.KN006162.1                              47589  4 -    317179 a-----t---g------------t-------------
i Manis_pentadactyla.KN006162.1                          I 23 I 8
s Marmota_marmota.CZRN01000018.1                          33098021  5 -  40650429 A-----A---T------------A------------A
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         7414  6 -    207569 AG----G---A------------T------------A
i Megaderma_lyra.MegLyr_scaffold_4542                    I 33 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              7102  4 +     13704 A-----T---A------------G-------------
i Mellivora_capensis.MelCap_flattened_line_69365         I 23 I 12
s Meriones_unguiculatus.MerUng_scaffold_7390                 28157  5 +    140813 A-----A---A------------G------------A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12178256  5 -  29670104 a-----g---t------------g------------a
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3726  7 +     10310 AGTTTTA------------------------------
i Mesoplodon_bidens.MesBid_scaffold_108144               I 25 I 10
s Microcebus_murinus.CM007674.1                           18287706  5 -  93316391 A-----A---T------------A------------A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11256584  5 -  27267610 C-----G---T------------G------------A
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miopithecus_ogouensis.k141_534055                           4697  5 -     28506 A-----A---T------------A------------A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         2379  4 -      8324 A-----T---A------------T-------------
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 23 I 12
s Mirza_zaza.k141_952172                                      5274  5 -     37649 a-----a---t------------a------------a
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    27231  7 -    437263 AGTTTTA------------------------------
i Monodon_monoceros.MonMon_M_scaffold_103                I 25 I 10
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138435  6 -    366855 G----AT---A------------T------------G
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 24 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   1161 17 +     82753 A-----GTGTG------------A--TGATTATTC-T
i Moschus_moschiferus.MosMos_scaffold_13123              I 23 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   32218  4 +     37127 A-----T---A------------T-------------
i Mungos_mungo.MunMun_flattened_line_23663               I 23 I 12
s Mus_caroli.LT608231.1                                   16085653  5 + 120003353 A-----A---T------------G------------A
i Mus_caroli.LT608231.1                                  C 0 C 0
s Mus_musculus.chr8                                       87646191  5 - 129401213 A-----A---T------------G------------A
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  90748265  5 - 130317789 A-----A---T------------G------------A
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2947  5 +     14296 A-----A---T------------A------------A
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               298291  4 -  14710649 A-----T---A------------G-------------
i Mustela_putorius.JH418006.1                            I 23 I 12
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186679  5 +    196477 A-----G---T------------A------------G
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.AXCS01343547.1                            186  5 +       996 A-----A---T------------A------------A
i Nannospalax_galili.AXCS01343547.1                      C 0 C 0
s Nasalis_larvatus.k141_413338                               10697  5 +     21681 A-----A---T------------A------------A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5866187  7 +   7148211 AGTTTTA------------------------------
i Neophocaena_asiaeorientalis.KZ687982.1                 I 25 I 10
s Noctilio_leporinus.NocLep_scaffold_251                    756986  5 +    783361 AG----T---T------------T-------------
i Noctilio_leporinus.NocLep_scaffold_251                 I 20 I 1
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146584  4 -   9404916 a-----t---a------------t-------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 15 I 12
s Nycticebus_bengalensis.LG01                            102575080  5 - 196305487 a-----a---t------------a------------a
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2766  5 +      8486 A-----A---T------------A------------A
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105745507  5 + 199412804 a-----a---t------------a------------a
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                              503685  4 -   2017862 A-----T---A------------T-------------
i Odobenus_rosmarus.KB229312.1                           I 23 I 12
s Odocoileus_virginianus.KZ100018.1                         145485 17 +    630418 A-----GTTTG------------A-TAACCa-t-tct
i Odocoileus_virginianus.KZ100018.1                      I 25 I 317
s Okapia_johnstoni.LVCL01S0005463.1                          76994 17 -    150152 A-----GTTGG------------C--TCATTCTTC-T
i Okapia_johnstoni.LVCL01S0005463.1                      I 25 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   16922  5 +     28053 A-----G---T------------G------------A
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    75024  5 +    102263 A-----G---C------------A------------A
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2782110  7 -  10937097 AGTTTTA------------------------------
i Orcinus_orca.KB316932.1                                I 33 I 10
s Otocyon_megalotis.JAEUCK010005147.1                       459338  4 -    559221 a-----t---a------------t-------------
i Otocyon_megalotis.JAEUCK010005147.1                    I 15 I 12
s Ovis_aries.CM001607.2                                   17586256 17 +  44047080 A-----GTTCG------------A--TAATTATTC-T
i Ovis_aries.CM001607.2                                  I 25 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      174233 17 -    191736 A-----GTTCG------------A--TAATTATTC-T
i Ovis_canadensis.OviCan_scaffold_2572                   I 25 C 0
s Pan_paniscus.KQ411613.1                                    39572  5 +     80009 A-----A---T------------A------------A
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189138465  5 + 189151597 A-----A---T------------A------------A
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  148233  4 +    230217 A-----T---A------------T-------------
i Panthera_onca.PanOnc_flattened_line_3271               I 23 I 12
s Panthera_pardus.KV860321.1                                261440  4 +  18783137 A-----T---A------------T-------------
i Panthera_pardus.KV860321.1                             I 23 I 12
s Panthera_tigris.KE722367.1                               4718077  4 -   8748460 A-----T---A------------T-------------
i Panthera_tigris.KE722367.1                             I 23 I 12
s Pantholops_hodgsonii.KE114653.1                          1265150 17 -   2937107 A-----GTTTG------------A--TAATTATTC-T
i Pantholops_hodgsonii.KE114653.1                        I 25 C 0
s Papio_anubis.CM001495.2                                183438732  5 + 183742232 G-----A---T------------A------------A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             2425  5 +     20448 G-----A---T------------A------------A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20559230  5 +  20919399 G-----A---T------------A------------A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   1168  5 +     41871 G-----A---T------------A------------A
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     4454  5 +     27711 G-----A---T------------A------------A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  4539  5 +      9205 G-----A---T------------A------------A
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9698  4 -     78924 A-----T---A------------T-------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 23 I 12
s Perodicticus_ibeanus.k141_855320                            5254  5 +     13100 A-----A---T------------G------------A
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             3627  5 +     25941 a-----a---t------------g------------a
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18187810  5 -  18517816 a-----g---c------------a------------a
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               9149  7 +     63832 AGTTTTA------------------------------
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 25 I 10
s Piliocolobus_badius.k141_1234363                           39209  5 +     62158 A-----A---T------------A------------A
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33931  5 +     89929 A-----A---T------------A------------A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            35347  5 +     51399 A-----A---T------------A------------A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14291583  5 -  14605196 A-----A---T------------A------------A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34855  7 +     35617 AGTTTTA------------------------------
i Platanista_gangetica.PlaMin_flattened_line_32310       I 25 I 10
s Pongo_abelii.CM009266.2                                189126657  5 + 189387572 A-----A---T------------A------------A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9566263  5 +   9816681 A-----A---T------------A------------A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68858  5 -     81375 A-----A---T------------A------------A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                               679  5 +     19060 A-----A---T------------A------------A
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2592963  5 -   4620579 a-----a---t------------a------------a
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986976  5 +   2598838 A-----A---T------------A------------A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          25265  5 +     38485 A-----A---T------------A------------A
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             1424  5 +      4256 A-----A---T------------A------------A
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22784  5 +     35766 a-----a---t------------a------------a
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            967  5 -     24134 A-----A---T------------A------------A
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24779  5 -     67325 a-----a---t------------a------------a
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           1024  5 -      6182 A-----A---T------------A------------A
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             5790  5 -     21651 A-----A---T------------G------------A
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11826  6 -     21811 AG----C---A------------T------------G
i Pteronotus_parnellii.KE909381.1                        I 20 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         37302  4 +     42204 A-----T---A------------G-------------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 23 I 12
s Pteropus_alecto.KB030862.1                              22974317  1 +  28871421 A------------------------------------
i Pteropus_alecto.KB030862.1                             I 33 I 3
s Puma_concolor.QAVW01001104.1                            20271366  4 -  38429054 A-----T---A------------T-------------
i Puma_concolor.QAVW01001104.1                           I 23 I 5
s Pygathrix_cinerea.k141_1153803                             10690  5 -     91421 A-----A---T------------A------------A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7604818  5 +   7812017 A-----A---T------------A------------A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10659  5 -     72585 A-----A---T------------A------------A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5733 17 +     55207 A-----GTTTG------------A--TAACCATTC-T
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 25 C 0
s Rattus_norvegicus.chr8                                 113028603  5 - 133307652 A-----A---T------------G------------G
i Rattus_norvegicus.chr8                                 I 98 n 5
s Rhinolophus_sinicus.LVEH01000134.1                        367454  6 -   3329780 AG----T---A------------T------------A
i Rhinolophus_sinicus.LVEH01000134.1                     I 33 C 0
s Rhinopithecus_bieti.k119_217274                             2374  5 -     11128 A-----A---T------------A------------A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91231729  5 - 195417433 A-----A---T------------A------------A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7667378  5 +   7961872 A-----A---T------------A------------A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85316  1 -     96226 A------------------------------------
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 33 I 3
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151975 16 -    313613 A-----C---AGAAATAGAGCA-T------------G
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 23 C 0
s Semnopithecus_entellus.k141_11662                          15202  5 -     19888 A-----A---T------------A------------A
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      22404  5 +     39453 A-----A---T------------A------------A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2930  5 +     27826 A-----A---T------------A------------A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             2451  5 -     19483 A-----A---T------------A------------A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      2513  5 +      7198 A-----A---T------------A------------A
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         10773  5 +     15514 A-----A---T------------A------------A
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            188272  5 -    191337 A-----T---A------------T------------G
i Solenodon_paradoxus.SolPar_flattened_line_5840         I 23 C 0
s Sorex_araneus.JH798187.1                                13648470  5 -  18376816 a-----t---a------------t------------a
i Sorex_araneus.JH798187.1                               I 27 C 0
s Spermophilus_dauricus.KZ294078.1                         1948804  5 -   3870691 A-----A---T------------A------------A
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27819  4 +     97271 A-----C---A------------T-------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 23 I 12
s Suricata_suricatta.SurSur_flattened_line_6629              15125  4 -    196729 A-----T---A------------T-------------
i Suricata_suricatta.SurSur_flattened_line_6629          I 23 I 12
s Sus_scrofa.JH118708.1                                      32360  5 -     47482 A-----T---A------------C------------T
i Sus_scrofa.JH118708.1                                  I 37 C 0
s Symphalangus_syndactylus.tarseq_199                      1088978  5 -   1523678 A-----A---T------------A------------A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 7422  6 +     41958 AG----T---A------------T------------G
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 20 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 70033  5 +    116680 A-----G---T------------A------------G
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115824 16 -    156842 a-----t---a------------taagtgtagtag-g
i Tapirus_indicus.TapInd_scaffold_9301                   I 23 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    384275 16 +    539355 a-----t---g------------taagtgtagtag-g
i Tapirus_terrestris.TapTer_scaffold_755                 I 23 C 0
s Tarsius_lariang.k141_2201908                               11235  5 +     70052 a-----a---g------------g------------a
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               15540  5 +     25099 A-----A---G------------G------------A
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186423776  5 + 186847797 A-----A---T------------A------------A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   2596  5 +      8208 A-----A---A------------A------------G
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Trachypithecus_auratus.k141_722599                          6504  5 -     20410 A-----A---T------------A------------A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    10700  5 +     15221 A-----A---T------------A------------A
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        6605  5 +     19930 A-----A---T------------A------------A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       3035  5 -     19997 A-----A---T------------A------------A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            43154  5 -     60166 A-----A---T------------A------------A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        10627  5 -     27529 A-----A---T------------A------------A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     10567  5 -     18194 A-----A---T------------A------------A
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           4302  5 -     21137 A-----A---T------------A------------A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    3005  5 -     10723 A-----A---T------------A------------A
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         2157  5 +      9834 A-----A---T------------A------------A
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        20475  5 +     32220 A-----A---T------------A------------A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5934572  5 +   6242583 A-----A---T------------A------------A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        3819  5 +     20839 A-----A---T------------A------------A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                   1407 17 -      1748 A-----GTTTG------------C--TAACTATTC-T
i Tragulus_javanicus.TraJav_scaffold_140459              I 25 C 0
s Tupaia_chinensis.KB320699.1                              2150995  5 +   4065304 a-----a---t------------a------------a
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     4293  5 -     10553 A-----A---T------------A------------A
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15738349  7 +  33153633 AGTTTTA------------------------------
i Tursiops_truncatus.MRVK01000835.1                      I 25 I 10
s Uropsilus_gracilis.UroGra_scaffold_12083                   52163 15 -     77625 A-----T---AGAAATATA-GAGT-------------
i Uropsilus_gracilis.UroGra_scaffold_12083               I 23 I 1
s Ursus_maritimus.KK499267.1                               4847547  4 -   5085361 A-----T---A------------T-------------
i Ursus_maritimus.KK499267.1                             I 23 I 12
s Varecia_rubra.k141_590885                                   7645  5 +     50397 A-----A---T------------A------------A
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              7699  5 +     24756 A-----A---T------------A------------A
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5369009  5 -   5488506 a-----c---a------------c------------t
i Vicugna_pacos.KN270157.1                               I 37 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  7998  4 -     43706 A-----T---A------------T-------------
i Vulpes_lagopus.VulLag_flattened_line_30954             I 15 I 12
s Xerus_inauris.XerIna_scaffold_48378                        20313  5 -     24430 A-----A---T------------A------------A
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          2255  4 +     86975 A-----T---A------------T-------------
i Zalophus_californianus.ZalCal_flattened_line_17732     I 23 I 12
s Zapus_hudsonius.ZapHud_scaffold_11398                      11276  4 +     63895 A-----A---T------------A-------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            12041  7 +     12536 AGTTTTA------------------------------
i Ziphius_cavirostris.ZipCav_flattened_line_71469        I 25 I 10
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Pteropus_vampyrus.KN534172.1                                2207 4483 -      8028 I
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1359220  0 +   3988456 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       2225 6 +     62944 ATGTA-T
s Acinonyx_jubatus.LLWD01001279.1                           824378 6 -   1699592 AACTG-T
i Acinonyx_jubatus.LLWD01001279.1                        I 12 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     66636 6 +     87051 AACTG-T
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507647 6 -  29979442 GACTA-T
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 12 C 0
s Ailurus_fulgens.LNAC01001112.1                             76430 6 -    347723 AACTA-T
i Ailurus_fulgens.LNAC01001112.1                         I 12 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     65916 6 -     89534 AACCA-T
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   10204 6 -     52922 ATCTG-T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         10135 6 -     28001 ATCTA-T
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                           581 6 -     18505 ATCTA-T
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           1430 6 -     12518 ATCTA-T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675976 6 -   2318259 AATAC-T
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             98457 6 -    100397 AATAC-T
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7842 6 +     20879 AGCTA-C
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        15025 6 +     17124 AACTA-T
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Avahi_laniger.k141_765380                                  49906 5 -     92717 aa-tg-c
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              50535 5 +     85213 aa-tg-c
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15192223 6 +  23207421 AATAC-T
i Balaenoptera_acutorostrata.KI537508.1                  I 10 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2688 6 -     18090 AATAC-T
i Balaenoptera_bonaerensis.DF707048.1                    I 10 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26898 6 +     34529 AATAC-T
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    199955 6 -    288883 ATTAC-T
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20273160 6 +  48749331 ATTAC-T
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1125716 6 -   1948126 ATTAC-T
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18083798 6 +  45695690 ATTAC-T
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2819465 6 +   4408762 ATTAC-T
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9999524 6 -  17673402 AATAC-T
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331988 6 -   7040546 AATAC-T
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  400264 6 -   1652518 AATAC-T
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17796391 6 -  60362399 AACTA-T
i CanFam4.chr16                                          I 12 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182448 6 -    185531 AACTA-T
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 12 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031834 6 -   9314153 aactA-T
i Canis_lupus_dingo.QKWQ01000480.1                       I 12 C 0
s Canis_lupus_familiaris.chr16                            17956099 6 -  59632846 aactA-T
i Canis_lupus_familiaris.chr16                           I 12 C 0
s Canis_lupus_orion.HG994398.1                            18497399 6 +  63665305 aactA-T
i Canis_lupus_orion.HG994398.1                           I 12 C 0
s Capra_aegagrus.CM003241.1                               18830094 6 +  46296322 AATAC-T
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18060814 6 -  44709034 AATAC-T
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           141627 6 -    496798 AACTA-T
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    134400 4 +    179628 AACT---
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89873 6 +    217609 AATAC-T
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 2
s Cephalopachus_bancanus.k141_2037105                         5542 6 -      8605 AACTA-T
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12228505 6 +  27778364 aacTA-T
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          3223 6 -      3715 AACTA-T
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4471163 6 +   4669795 ATCTA-T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         9712 6 -     19203 ATCTA-T
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           4133 6 +      8260 ATCTA-T
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           4361 6 +     27781 ATCTA-T
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         4520 6 -     20310 ATCTA-T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           7504 6 +     29689 ATCTA-T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            1940 6 +      9989 ATCTA-T
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          10187 6 -     27936 ATCTA-T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                            10214 6 -     11289 ATCTA-T
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38812586 6 +  39242232 ATCTA-T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21218285 6 -  21565898 ATCTA-T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       35404 6 -     53127 ATCTA-T
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        2689 6 +      7159 ATCTA-T
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       10207 6 -     27947 ATCTA-T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         10183 6 +     17596 ATCTA-T
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         40684 6 -     41420 ATCTA-T
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            5440 6 -      6351 ctcta-t
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             17326 6 -     52598 aacta-t
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12676 6 +     57038 aacta-t
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chlorocebus_aethiops.ctg25                              18424146 5 -  18827391 -TCTA-T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       10588 5 -     50209 -TCTA-T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135417593 4 + 135778131 --CTA-T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15734 6 +     19366 AACCA-T
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170833 6 +    839153 AACCG-T
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1906102 6 +   2368649 ATCTA-T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199945771 6 + 200372422 ATCTA-T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              32643 6 +     84244 ATCTA-T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17546927 6 -  53390261 AATTA-T
i Condylura_cristata.JH655891.1                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 46881 6 +     63868 AACTA-T
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11663868 6 + 224834208 AACTG-T
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_287352              1101 6 +      4208 AACTA-T
i Crocidura_indochinensis.CroInd_scaffold_287352         C 0 I 65
s Cryptoprocta_ferox.CryFer_flattened_line_16129             25329 6 -     87169 AACTG-T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 12 I 222
s Dasypus_novemcinctus.JH564415.1                            61709 6 +   2246927 aactc-t
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12533488 6 -  12879189 aacta-t
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811858 6 +  35494412 AATAC-T
i Delphinapterus_leucas.KZ290073.1                       I 10 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  670358 6 +   1390856 AACTA-T
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    3113 6 +    198055 AACTA-T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE759718.1                                   8049 6 +     11740 AACTA-T
i Eidolon_helvum.KE759718.1                              I 3 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       311129 6 +    607251 AATAC-T
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          12673 6 -    110024 ATTTA-T
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01123422.1                            3623 6 +      5358 AATTA-T
i Ellobius_talpinus.LOJH01123422.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16326410 6 -  41312741 AACTA-T
i Enhydra_lutris.KZ291758.1                              I 12 C 0
s Equus_asinus.JREZ01000139.1                              1280398 6 +   4378816 AACTA-T
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18528219 6 -  39960074 AACTA-T
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               30234 6 +    498745 AACTA-T
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3326690 6 -   7059049 AAGTA-T
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21200777 6 -  21539334 ATCTA-T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11534 6 +    133382 AATAC-T
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 10 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             25471 6 -     44125 AATAC-T
i Eubalaena_japonica.EubJap_flattened_line_31514         I 10 C 0
s Eulemur_albifrons.k141_342033                              10007 6 -     14127 AACTA-T
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                2705 6 -     16928 AACTA-T
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              11738 6 -     25546 AACTA-T
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             8923 6 +     26330 AACTG-T
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 10180 6 +     23973 AACTA-T
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 8923 6 +     75513 aacta-t
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  6875 6 +     97555 aacta-t
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                             9801 6 +     26496 aacta-t
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                   407 6 -     17153 AACTA-T
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                               9986 6 +    111500 aacta-t
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20234243 6 + 206538554 AACTG-T
i Felis_catus.CM001381.2                                 I 12 C 0
s Felis_catus_fca126.CM031415.1                           20193088 6 + 205367284 AACTG-T
i Felis_catus_fca126.CM031415.1                          I 12 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  6600 6 -     36744 AACTG-T
i Felis_nigripes.FelNig_flattened_line_20823             I 12 C 0
s Galagoides_demidoff.k141_31856                              3346 6 -      3432 aacta-t
i Galagoides_demidoff.k141_31856                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_197845                194 6 -      3123 aacta-t
i Galeopterus_variegatus.GalVar_scaffold_197845          n 6 I 280
s Giraffa_tippelskirchi.LVKQ01S007888.1                     609094 6 -    660261 AATAC-T
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            30920 6 +     49224 AACTA-T
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              11460 6 -     32273 ATCTA-T
i Gorilla_beringei.k141_3596273                          C 0 I 109
s Gorilla_gorilla.LT578341.1                             186333608 6 + 186649187 ATCTA-T
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   30640 6 +     78134 AATTA-T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           3071 6 -     19426 AACTA-T
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              8215 6 -     15286 AACTA-T
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                              9853 6 +     18253 AACTA-T
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                          9956 6 -     41752 aacta-t
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                          9789 6 -     16460 aacta-t
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               239140 6 +    327341 AACTG-T
i Helogale_parvula.HelPar_flattened_line_2585            I 12 I 233
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18298 6 +     36099 AATAC-T
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       108915 6 +   1711038 AACTA-T
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 30
s Hipposideros_galeritus.HipGal_scaffold_29171               40351 6 +     43066 AACTA-T
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 I 30
s Hoolock_leuconedys.ctg274                                    430352 6 +    630532 ATCTA-T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  41531 6 +     55795 AACTG-T
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 12 C 0
s Hylobates_agilis.k141_307679                               13283 6 -     15490 ATCTA-T
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              55289 6 +     67168 ATCTA-T
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189538939 6 - 191637585 ATCTG-T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3331832 6 -  11177569 ATCTG-T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7515177 6 -   7955117 AGCTA-C
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   18772 6 +     31101 aacta-t
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               23075 6 +     23964 AATAC-T
i Inia_geoffrensis.IniGeo_flattened_line_48101           I 10 C 0
s Jaculus_jaculus.JH725527.1                               8272278 6 -   9596543 aacca-t
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                2433 6 -      3359 AATAC-T
i Kogia_breviceps.KogBre_flattened_line_192630           I 10 C 0
s Lemur_catta.scaffold_24                                 15520316 6 -  30322482 aacta-t
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          7227 6 -     23766 aatga-t
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             25174 6 +     45836 aatga-t
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         32086 6 -     32627 aacta-t
i Lepilemur_ruficaudatus.k141_420445                     C 0 I 62
s Lepilemur_septentrionalis.k141_185316                      23229 6 +     54090 aatga-t
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3039559 6 +   3914936 AACTA-T
i Leptonychotes_weddellii.KB714746.1                     I 12 C 0
s Lipotes_vexillifer.KE559953.1                             268127 6 -    662738 AATAC-T
i Lipotes_vexillifer.KE559953.1                          I 10 C 0
s Lophocebus_aterrimus.ctg367                              1432708 6 +   1826925 ATCTC-T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            1265 6 +     11245 aacta-t
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1000102 6 +   6120653 aacta-t
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17952339 6 -  59628241 aactA-T
i Lycaon_pictus.CM007581.1                               I 12 C 0
s Macaca_arctoides.k141_2326796                               2529 6 +     40492 ATCTA-T
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59671784 6 +  60120075 ATCTA-T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  8284 6 -     26193 ATCTA-T
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            76081 6 -    114318 ATCTA-T
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  1796 6 -     23192 ATCTA-T
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                11249 6 -     29190 ATCTA-T
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  19816 6 +     37952 ATCTA-T
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834904 6 + 187317192 ATCTA-T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25453467 6 -  25927173 ATCTA-T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  75665 6 +     89720 ATCTA-T
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 2663 6 +     20474 ATCTA-T
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   2464 6 -     14993 ATCTA-T
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  325336 6 -    668171 ATCTA-T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                  767 6 -     24072 ATCTA-T
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               21403 6 -     45290 ATCTA-T
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88138 6 +     94391 aacta-t
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 3 C 0
s Mandrillus_leucophaeus.scaffold280                      23932951 6 -  24302211 ATCTA-T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               347128 6 +    752769 ATCTA-T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              16216 6 +    737560 aactg-t
i Manis_javanica.JSZB01003497.1                          I 8 C 0
s Manis_pentadactyla.KN006162.1                              47601 6 -    317179 aacta-t
i Manis_pentadactyla.KN006162.1                          I 8 C 0
s Marmota_marmota.CZRN01000018.1                          33098026 6 -  40650429 AGCTA-C
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         7420 6 -    207569 AAGTA-C
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              7118 6 +     13704 AACTA-T
i Mellivora_capensis.MelCap_flattened_line_69365         I 12 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 28162 6 +    140813 AATTA-T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12178261 6 -  29670104 AACTG-T
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3743 6 +     10310 AATAC-T
i Mesoplodon_bidens.MesBid_scaffold_108144               I 10 C 0
s Microcebus_murinus.CM007674.1                           18287711 6 -  93316391 AACGA-T
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11256589 6 -  27267610 AACTA-T
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miopithecus_ogouensis.k141_534055                           4702 6 -     28506 ATCTA-T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         2395 6 -      8324 AACTA-T
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 12 C 0
s Mirza_zaza.k141_952172                                      5279 6 -     37649 aacta-t
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    27248 6 -    437263 AATAC-T
i Monodon_monoceros.MonMon_M_scaffold_103                I 10 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138441 6 -    366855 AACTG-T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 37
s Moschus_moschiferus.MosMos_scaffold_13123                   1178 6 +     82753 AATAC-T
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   32234 6 +     37127 AACTG-T
i Mungos_mungo.MunMun_flattened_line_23663               I 12 I 242
s Mus_caroli.LT608231.1                                   16085658 6 + 120003353 AACTA-T
i Mus_caroli.LT608231.1                                  C 0 n 0
s Mus_musculus.chr8                                       87646196 6 - 129401213 AACTa-t
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  90748270 6 - 130317789 AACTa-t
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              2952 6 +     14296 AACTA-T
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               298307 7 -  14710649 AACTACT
i Mustela_putorius.JH418006.1                            I 12 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186684 6 +    196477 AACAA-T
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.AXCS01343547.1                            191 6 +       996 AATGC-T
i Nannospalax_galili.AXCS01343547.1                      C 0 C 0
s Nasalis_larvatus.k141_413338                               10702 6 +     21681 ATCTA-T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5866204 6 +   7148211 AATAC-T
i Neophocaena_asiaeorientalis.KZ687982.1                 I 10 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    756992 6 +    783361 AACTG-T
i Noctilio_leporinus.NocLep_scaffold_251                 I 1 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146600 6 -   9404916 aactA-T
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 12 C 0
s Nycticebus_bengalensis.LG01                            102575085 6 - 196305487 aacta-t
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             2771 6 +      8486 AACTA-T
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105745512 6 + 199412804 aacta-t
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                              503701 6 -   2017862 AACTA-T
i Odobenus_rosmarus.KB229312.1                           I 12 C 0
s Odocoileus_virginianus.KZ100018.1                         145819 6 +    630418 aatac-c
i Odocoileus_virginianus.KZ100018.1                      I 317 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          77011 6 -    150152 AATAC-T
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   16927 6 +     28053 AACTA-T
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    75029 6 +    102263 AACTA-T
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2782127 6 -  10937097 AATAC-T
i Orcinus_orca.KB316932.1                                I 10 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       459354 6 -    559221 aacta-T
i Otocyon_megalotis.JAEUCK010005147.1                    I 12 C 0
s Ovis_aries.CM001607.2                                   17586273 6 +  44047080 AATAC-T
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      174250 6 -    191736 AATAC-T
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    39577 6 +     80009 ATCTA-T
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189138470 6 + 189151597 ATCTA-T
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  148249 6 +    230217 AACTG-T
i Panthera_onca.PanOnc_flattened_line_3271               I 12 C 0
s Panthera_pardus.KV860321.1                                261456 6 +  18783137 AACTG-T
i Panthera_pardus.KV860321.1                             I 12 C 0
s Panthera_tigris.KE722367.1                               4718093 6 -   8748460 AACTG-T
i Panthera_tigris.KE722367.1                             I 12 C 0
s Pantholops_hodgsonii.KE114653.1                          1265167 6 -   2937107 AATAC-T
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183438737 6 + 183742232 ATCTC-T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             2430 6 +     20448 ATCTC-T
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20559235 6 +  20919399 ATCTC-T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   1173 6 +     41871 ATCTC-T
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     4459 6 +     27711 ATCTC-T
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  4544 6 +      9205 ATCTC-T
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9714 6 -     78924 AACTG-T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 12 C 0
s Perodicticus_ibeanus.k141_855320                            5259 6 +     13100 AACTA-T
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             3632 6 +     25941 aacta-t
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18187815 6 -  18517816 aacta-t
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               9166 6 +     63832 AATAC-T
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 10 C 0
s Piliocolobus_badius.k141_1234363                           39214 6 +     62158 ATCTA-T
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33936 6 +     89929 ATCTA-T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            35352 6 +     51399 ATCTA-T
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14291588 6 -  14605196 ATCTA-T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34872 6 +     35617 AATAC-T
i Platanista_gangetica.PlaMin_flattened_line_32310       I 10 C 0
s Pongo_abelii.CM009266.2                                189126662 6 + 189387572 ATCTA-T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9566268 6 +   9816681 ATCTA-T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68863 6 -     81375 ATCTA-T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                               684 6 +     19060 ATCTA-T
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2592968 6 -   4620579 aacta-t
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986981 6 +   2598838 AATTG-T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          25270 6 +     38485 AATTG-T
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             1429 6 +      4256 AATTG-T
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22789 6 +     35766 aattg-t
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            972 6 -     24134 AATTG-T
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24784 6 -     67325 aattg-t
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           1029 6 -      6182 AATTG-T
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             5795 6 -     21651 AACAA-T
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11832 6 -     21811 AACTA-T
i Pteronotus_parnellii.KE909381.1                        C 0 I 37
s Pteronura_brasiliensis.PteBra_flattened_line_31117         37318 6 +     42204 AACTA-A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 12 C 0
s Pteropus_alecto.KB030862.1                              22974321 6 +  28871421 AACTA-T
i Pteropus_alecto.KB030862.1                             I 3 C 0
s Puma_concolor.QAVW01001104.1                            20271375 6 -  38429054 AACTG-T
i Puma_concolor.QAVW01001104.1                           I 5 C 0
s Pygathrix_cinerea.k141_1153803                             10695 6 -     91421 ATCTA-T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7604823 6 +   7812017 ATCTA-T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10664 6 -     72585 ATCTA-T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5750 6 +     55207 AATAC-T
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53566087 6 +  90668790 AACTA-T
i Rattus_norvegicus.chr16                                I 5 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        367460 6 -   3329780 AACTA-T
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             2379 6 -     11128 ATCTA-T
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91231734 6 - 195417433 ATCTA-T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7667383 6 +   7961872 ATCTA-T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85320 6 -     96226 AACTA-T
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 3 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151991 6 -    313613 AATTA-T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          15207 6 -     19888 ATCTA-T
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      22409 6 +     39453 GTCCA-T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2935 6 +     27826 ATCTA-T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             2456 6 -     19483 GTCCA-T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      2518 6 +      7198 ATCTA-T
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         10778 6 +     15514 GTCCA-T
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            188277 6 -    191337 AACTG-T
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13648475 5 -  18376816 ta-ta-t
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1948809 6 -   3870691 AGCTA-C
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27835 6 +     97271 AACTA-T
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 12 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              15141 6 -    196729 AACTG-T
i Suricata_suricatta.SurSur_flattened_line_6629          I 12 I 241
s Sus_scrofa.JH118708.1                                      32365 1 -     47482 A------
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1088983 6 -   1523678 ATCTA-T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 7428 6 +     41958 AACTG-T
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 70038 6 +    116680 AACAA-T
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115840 6 -    156842 aacta-t
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    384291 6 +    539355 aacta-t
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               11240 6 +     70052 aacta-t
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               15545 6 +     25099 AACTA-T
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186423781 6 + 186847797 ACCTA-T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   2601 6 +      8208 AACTA-T
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 I 25
s Trachypithecus_auratus.k141_722599                          6509 6 -     20410 ATCTA-T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    10705 6 +     15221 ATCGA-T
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        6610 6 +     19930 ATCTA-T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       3040 6 -     19997 ATCTA-T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            43159 6 -     60166 ATCTA-T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        10632 6 -     27529 ATCGA-T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     10572 6 -     18194 ATCTA-T
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           4307 6 -     21137 ATCTA-T
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    3010 6 -     10723 ATCTA-T
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         2162 6 +      9834 ATCGA-T
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        20480 6 +     32220 ATCGA-T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5934577 6 +   6242583 ATCGA-T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        3824 6 +     20839 ATCTA-T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                   1424 6 -      1748 AATAC-T
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 C 0
s Tupaia_chinensis.KB320699.1                              2151000 6 +   4065304 aacag-t
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     4298 6 -     10553 AACTG-T
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15738366 6 +  33153633 AATAC-T
i Tursiops_truncatus.MRVK01000835.1                      I 10 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   52179 6 -     77625 AATCA-T
i Uropsilus_gracilis.UroGra_scaffold_12083               I 1 C 0
s Ursus_maritimus.KK499267.1                               4847563 6 -   5085361 GACTA-T
i Ursus_maritimus.KK499267.1                             I 12 C 0
s Varecia_rubra.k141_590885                                   7650 6 +     50397 AACTA-T
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              7704 6 +     24756 AACTA-T
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5369014 6 -   5488506 aatac-t
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  8014 6 -     43706 AACTA-T
i Vulpes_lagopus.VulLag_flattened_line_30954             I 12 C 0
s Xerus_inauris.XerIna_scaffold_48378                        20318 6 -     24430 AAGTA-C
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          2271 6 +     86975 AACTA-T
i Zalophus_californianus.ZalCal_flattened_line_17732     I 12 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      11280 6 +     63895 AACTA-T
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            12058 6 +     12536 AATAC-T
i Ziphius_cavirostris.ZipCav_flattened_line_71469        I 10 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906 0 -     10935 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tonatia_saurophila.TonSau_scaffold_294                     79553 7 +    610378 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937 0 +    114563 C
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Pteropus_vampyrus.KN534172.1                                2207 4483 -      8028 I
e Procavia_capensis.ProCapCap_scaffold_85530                 10240 0 -     22811 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823 1 +     22620 I
e Petromus_typicus.PetTyp_scaffold_42190                     26813 0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1359220 0 +   3988456 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016 1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456 1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390 1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692 1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520 1 +     14753 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686 0 +   8254450 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009 7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Loxodonta_africana.GL010049.1                            4214777 0 -  43346337 C
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Hystrix_cristata.HysCri_scaffold_5660                      81626 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547 0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491 0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051 0 +  22651954 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eptesicus_fuscus.JH977646.1                              2144447 1 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1089268 0 +  10337057 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084 0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495 7 +  20541912 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          11139 0 -     20389 C
e Chinchilla_lanigera.JH722012.1                           1251498 0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157 0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465 7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102 7 +     43469 I
e Anoura_caudifer.AnoCau_scaffold_1412                      183691 7 +    412891 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       2231 66 +     62944 AACAAAG-ATT-TAA------------GCACACGCAG-AAG---------------------CCTGGAGATGCCAG-----TCG-G------T------G----CCA---------CA-----------------G-----------TC-GGATGAAAGGA--T
s Acinonyx_jubatus.LLWD01001279.1                           824384 65 -   1699592 AACAAAG-ATC-TAT------------GGAAACCCAG-AAG---------------------CC-AGAGA----TG-----CTG-G------TCTA-T-G----CCA---------CA-----------------G-----------TC-ACATTAGAGAA--G
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     66642 49 +     87051 GATAATA-AGCATACAGAATAACAATAAGGTGTATAG-AAA---------------------CCTGGAAA----GT----------------------------------------------------------------------------------------
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 29
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507653 66 -  29979442 AACAAAG-ATC-TAT------------AGGCACACAG-AAG---------------------CCTAGAGA----GG-----CTC-A------TCTG-T-G----CTA---------TA-----------------G-----------TC-ACATGAGAGAA--T
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             76436 66 -    347723 AACAAAG-ATC-TGT------------GGGCACACAG-AAG---------------------CCTGGAGA----GG-----TTG-A------TATA-T-G----CCA---------TA-----------------A-----------TA-AGATGAGAGAA--T
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     65922 36 -     89534 GACAATG-ACC-TAT------------GAGCACACAG-AAA---------------------CCTGGAGA----GG----------------------------------------------------------------------------------------
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 24
s Allenopithecus_nigroviridis.k141_3361533                   10210 66 -     52922 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACGCCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGACAGGA--T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         10141 66 -     28001 AACAAAG-ATC-TAA------------GTACACGCAG-AAG---------------------CCTGGAGACGCCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGACAGGA--T
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                           587 66 -     18505 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACGCCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGACAGGA--T
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           1436 66 -     12518 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACGCCAG-----TCG-G------T------G----CCA---------TC-----------------G-----------TC-GGATGACAGGA--T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          675982 64 -   2318259 AACAAAG-ATC-TGT------------GGGCACATGG-AAG---------------------CCTAGAGA----GG-----CGA-G------TCTG-T-G----CCA---------CA-----------------G-----------TC-AAATGA--GAA--C
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 1
s Antilocapra_americana.AntAmePen_scaffold_12469             98463 66 -    100397 AACAAAG-ATC-TGT------------GGGCACATGA-AAG---------------------CCTAGAGA----GG-----CTG-G------TCTG-T-G----CCA---------CA-----------------G-----------TC-AGATGAGAGAA--T
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 I 1
s Aplodontia_rufa.AprRuf_scaffold_68852                       7848 71 +     20879 AACAAAG-GTC-TGT------------GAGCACACAG-AGG---------------------TGTGGTGG----GA-----G-G-GGGCTGATCTG-T-G----TCA---------TT-----------------G-----------CC-AGATGAGAGAA--T
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        15031 66 +     17124 AACAAA-GATC-TAT------------GGGCACACAG-AAG---------------------CCTGGAGA----GGCTGG-TCT-G------T------A----CTG---------tg-----------------g-----------tc-agataagacaa--t
i Arctocebus_calabarensis.k141_288239                    C 0 I 478
s Avahi_laniger.k141_765380                                  49911 62 -     92717 aacggag-atc-tat------------gggcacacag-aag---------------------CCTGGACA----GG-----TCT-G------T------G----CCG---------TG-----------------G-----------TT-AGATGACAGAA--T
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              50540 62 +     85213 aacggag-atc-tat------------gggcacacag-aag---------------------CCTGGACA----GG-----TCT-G------T------G----CCG---------TG-----------------G-----------TT-AGATGACAGAA--T
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15192229 65 +  23207421 AACAAAG-ATC-TGT------------GGGCACACAG-AAG---------------------CCTAGAG-----GG-----CTG-G------TCTG-T-G----CCA---------CA-----------------G-----------TC-AGATGAGAGAA--T
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 1
s Balaenoptera_bonaerensis.DF707048.1                         2694 65 -     18090 AACAAAG-ATC-TGT------------GGGCACACAG-AAG---------------------CCTAGAG-----GG-----CTG-G------TCTG-T-G----CCA---------CA-----------------G-----------TC-AGATGAGAGAA--T
i Balaenoptera_bonaerensis.DF707048.1                    C 0 I 1
s Beatragus_hunteri.BeaHun_scaffold_50177                    26904 66 +     34529 AACAAAG-ATC-TAT------------GGGCACATGG-AAG---------------------CCTAGAGA----GG-----CGA-G------TCTG-T-G----CCA---------CA-----------------G-----------TC-AGATGAGAGAA--C
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 1
s Bison_bison.KN261452.1                                    199961 66 -    288883 AACAAAG-ATC-TGT------------GGGCACATGG-AAG---------------------CCTAGAGA----GG-----cgg-g------tctg-t-g----cca---------ca-----------------g-----------tc-agatGAGAGAA--T
i Bison_bison.KN261452.1                                 C 0 I 1
s Bos_indicus.CM003047.1                                  20273166 66 +  48749331 AACAAAG-ATC-TGT------------GGGCACATGG-AAG---------------------CCTAGAGA----GG-----cgg-g------tctg-t-g----cca---------ca-----------------g-----------tc-agatGAGAGAA--T
i Bos_indicus.CM003047.1                                 C 0 I 1
s Bos_mutus.JH880303.1                                     1125722 66 -   1948126 AACAAAG-ATC-TGT------------GGGCACATGG-AAG---------------------CCTAGAGA----GG-----cgg-g------tctg-t-g----cca---------ca-----------------g-----------tc-agatGAGAGAA--T
i Bos_mutus.JH880303.1                                   C 0 I 1
s Bos_taurus.CM000203.6                                   18083804 66 +  45695690 AACAAAG-ATC-TGT------------GGGCACATGG-AAG---------------------CCTAGAGA----GG-----cgg-g------tctg-t-g----cca---------ca-----------------g-----------tc-agatGAGAGAA--T
i Bos_taurus.CM000203.6                                  C 0 I 1
s Bubalus_bubalis.KI419123.1                               2819471 66 +   4408762 AACAAAG-ATC-TGT------------GGGCACATGG-AAG---------------------CCTAGAGA----GG-----CGG-G------TCTG-T-G----CCA---------CA-----------------G-----------CC-AGATGAGAGAA--C
i Bubalus_bubalis.KI419123.1                             C 0 I 1
s Camelus_bactrianus.KN276810.1                            9999530 66 -  17673402 GACAAAG-ATC-TGT------------GGGCACACAG-AAG---------------------CCTAGAGA----GA-----CTG-G------TCT--TGG----CCA---------CA-----------------G-----------TC-AGGTGAGAAAA--C
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2331994 66 -   7040546 GACAAAG-ATC-TGT------------GGGCACACAG-AAG---------------------CCTAGAGA----GA-----CTG-G------TCT--TGG----CCA---------CA-----------------G-----------TC-AGGTGAGAAAA--C
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  400270 66 -   1652518 GACAAAG-ATC-TGT------------GGGCACACAG-AAG---------------------CCTAGAGA----GA-----CTG-G------TCT--TGG----CCA---------CA-----------------G-----------TC-AGGTGAGAAAA--C
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17796397 65 -  60362399 AACAAAG-ATC-TAT------------GGGTACACAG-AAG---------------------CCTAGAGA----GG-----CTG-A------TCT--T-G----CCA---------TA-----------------G-----------TC-ACATGAGAGAA--T
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182454 65 -    185531 AACAAAG-ATC-TAT------------GCGTACACAG-AAG---------------------CCTAGAGA----GG-----CTG-A------TCT--T-G----CCA---------TA-----------------G-----------TC-ACATGAGAGAA--T
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031840 65 -   9314153 AACAAAG-ATC-TAT------------GGGTACACAG-AAG---------------------CCTAGAGA----GG-----CTG-A------TCT--T-G----CCA---------TA-----------------G-----------TC-ACATGAGAGAA--T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17956105 65 -  59632846 AACAAAG-ATC-TAT------------GCGTACACAG-AAG---------------------CCTAGAGA----GG-----CTG-A------TCT--T-G----CCA---------TA-----------------G-----------TC-ACATGAGAGAA--T
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18497405 65 +  63665305 AACAAAG-ATC-TAT------------GGGTACACAG-AAG---------------------CCTAGAGA----GG-----CTG-A------TCT--T-G----CCA---------TA-----------------G-----------TC-ACATGAGAGAA--T
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18830100 64 +  46296322 AACAAAG-ATC-TGT------------GGGCACATGG-AAG---------------------CCTAGAGA----GG-----Cga-g------tctg-t-g----cca---------ca-----------------g-----------tc-agatGA--GAA--C
i Capra_aegagrus.CM003241.1                              C 0 I 1
s Capra_hircus.CM004588.1                                 18060820 64 -  44709034 AACAAAG-ATC-TGT------------GGGCACATGG-AAG---------------------CCTAGAGA----GG-----Cga-g------tctg-t-g----cca---------ca-----------------g-----------tc-agatGA--GAA--C
i Capra_hircus.CM004588.1                                C 0 I 1
s Carlito_syrichta.NW_007259797.1                           141633 66 -    496798 AACAATG-ATC-TAT------------GTGCACGTGA-AGA---------------------CCTGGAAA----AAC-GGCTCT-A------T------G----CCA---------TG-----------------G-----------TC-AGATGAGAGAA--C
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    134404 36 +    179628 AACAATG-ATC-AAT------------GTGAACATGG-AAG---------------------CCTAGAAA----TA----------------------------------------------------------------------------------------
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 28
s Catagonus_wagneri.CatWag_scaffold_2839                     89881 66 +    217609 AACAAGA-ATC-TGT------------GGGCACATGG-AAG---------------------CCTAGCAA----GG-----CT-GG------TCTG-T-G----CCA---------CA-----------------G-----------TC-AGATGAGAGAA--T
i Catagonus_wagneri.CatWag_scaffold_2839                 I 2 C 0
s Cephalopachus_bancanus.k141_2037105                         5548 66 -      8605 AACAATG-ATC-TAT------------GTGCATGTGA-AGA---------------------CCTGGAAA----AA-TGGCTGT-G------T------G----CCA---------TG-----------------G-----------TC-AGATGAGAGAA--C
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12228511 30 +  27778364 AACAACG-ATC-TAC------------AGGCACACCG-AAG---------------------CCTG--------------------------------------------------------------------------------------------------
i Ceratotherium_simum.JH767749.1                         C 0 I 22
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          3229 30 -      3715 AACAACG-ATC-TAC------------AGGCACACCG-AAG---------------------CCTG--------------------------------------------------------------------------------------------------
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 I 22
s Cercocebus_atys.KQ010504.1                               4471169 66 +   4669795 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGATGCCAG-----TCA-G------T------G----CCA---------TA-----------------G-----------TC-AGAGGAGAGGA--T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         9718 66 -     19203 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGATGCCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGAGGAGAGGA--T
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           4139 66 +      8260 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGATGCCAG-----TCA-G------T------G----CCA---------TA-----------------G-----------TC-AGAGGAGAGGA--T
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           4367 66 +     27781 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGATGCCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGAGGAGAGGA--T
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         4526 66 -     20310 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACGCCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGACAGGA--T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           7510 66 +     29689 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACGCCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGACAGGA--T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            1946 66 +      9989 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACGCCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGACAGGA--T
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          10193 66 -     27936 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACGCCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGACAGGA--T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                            10220 66 -     11289 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGATGCCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGACAGGA--T
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38812592 66 +  39242232 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGATGCCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGACAGGA--T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21218291 66 -  21565898 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGATGCCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGACAGAA--T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       35410 66 -     53127 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGATGCCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGACAGGA--T
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        2695 66 +      7159 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGATGCCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGAGGAGAGGA--T
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       10213 66 -     27947 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGATGCCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGACAGGA--T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         10189 66 +     17596 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGATGCCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGAGGACAGGA--T
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         40690 66 -     41420 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACGCCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGACAGGA--T
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            5446 66 -      6351 gacaaag-gtc-tac------------gggcacaggg-aag---------------------cacagagg----gg-----CTG-A------TCTG-T-G----CCA---------CA-----------------G-----------CC-AGGTGAGAGGA--T
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             17332 62 -     52598 aacagag-atc-tat------------gggcacacag-aTG---------------------CCTGGAAA----GG-----TCT-G------T------G----CTA---------TG-----------------G-----------TC-AGATGAGACAA--T
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12682 62 +     57038 aacagag-atc-tat------------gggcacacag-aTG---------------------CCTGGAAA----GG-----TCT-G------T------G----CAG---------TG-----------------G-----------TC-AGATGAGACAA--T
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chlorocebus_aethiops.ctg25                              18424151 66 -  18827391 AACAAAG-ATC-TAA------------GTGCATGCAG-AAG---------------------CCTGGAGACGCCCG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGACAGGA--T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       10593 66 -     50209 AACAAAG-ATC-TAA------------GTGCATGCAG-AAG---------------------CCTGGAGACGCCCG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGACAGGA--T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135417597 66 + 135778131 AACAAAG-ATC-TAA------------GTGCATGAAG-AAG---------------------CCTGGAGACGCCCG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-AGATGACAGGA--T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15740 65 +     19366 GACAA-G-ATC-TAT------------AAGCCCATGG-AAG---------------------CATGGAGA----GG-----CAA-A------TCTG-T-G----CCA---------CA-----------------G-----------TC-AGAGGAGAGAA--T
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170839 65 +    839153 GACAA-G-ATC-TAT------------AAGCCCATGG-AAG---------------------CATGGAGA----GG-----CAA-A------TCTG-T-G----CCA---------CA-----------------G-----------TT-AGAGGAGAGAA--T
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1906108 66 +   2368649 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACGCCAG-----TCG-G------G------G----CCA---------TA-----------------G-----------TC-GGATGAGAGGA--T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199945777 66 + 200372422 AACAAAG-ATC-TAA------------GTGCACACAG-AAG---------------------CCTGGAGACGCCAG-----TCG-G------G------G----CCA---------TA-----------------G-----------TC-GGATGAGAGGA--T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              32649 66 +     84244 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACGCCAG-----TCG-G------G------G----CCA---------TA-----------------G-----------TT-GGATGAGAGGA--T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17546933 32 -  53390261 AACAAAG-ATT-GGT------------GGATACACAG-AG----------------------CCTGGAG-----------------------------------------------------------------------------------------------
i Condylura_cristata.JH655891.1                          C 0 I 25
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          11139 35 -     20389 -ACAAAG-AGC-AGT------------GGGCACACAG-AAG---------------------CCTAGAGA----GG----------------------------------------------------------------------------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 34
s Cricetomys_gambianus.CriGam_scaffold_18520                 46887 36 +     63868 AACAATA-AGC-TAT------------GGGCATATAA-AAA---------------------CCTGgaga----ga----------------------------------------------------------------------------------------
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 30
s Cricetulus_griseus.LT883664.1                           11663874 49 + 224834208 AACAATA-AGCATGCAGAATAACAATAAGGCACACAG-AAA---------------------CCTGCAGA----GA----------------------------------------------------------------------------------------
i Cricetulus_griseus.LT883664.1                          C 0 I 29
s Crocidura_indochinensis.CroInd_scaffold_109268              8111 40 +      9948 AGCAAAG-ATC-TAT------------TGGCACTCAG-AA----------------------CCAGAAGA----GC-----TTG-G------T-----------------------------------------------------------------------
i Crocidura_indochinensis.CroInd_scaffold_109268         I 363 I 355
s Cryptoprocta_ferox.CryFer_flattened_line_16129             25557 66 -     87169 AACAAAG-ATC-TGT------------GGGCACCCAG-AAG---------------------CCTGGAGA----TG-----TTG-G------TCTA-T-G----CCA---------TA-----------------G-----------TC-AGGTGAGAGAG--T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 222 C 0
s Dasypus_novemcinctus.JH564415.1                            61715 67 +   2246927 ggcaaag-atc-ttg------------cggcacaaggaaag---------------------catggaga----gg-----cgg-a------tctg-t-g----cca---------cc-----------------g-----------tc-agGTGAGAGAA--T
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12533494 61 -  12879189 agcaaa--atc-tat------------gggcacacag-aag---------------------CCTGGAGA----GG-----TCT-G------T------G----CTG---------TG-----------------G-----------TC-GGATGAGAGAA--T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811864 66 +  35494412 AACAAAG-ATC-GGT------------GGGCACACAG-AGG---------------------TCTAGAGA----GG-----CTG-G------TCTG-T-G----CCA---------CA-----------------G-----------TC-AGATGAGAGAA--T
i Delphinapterus_leucas.KZ290073.1                       C 0 I 1
s Dicerorhinus_sumatrensis.PEKH010002091.1                  670364 30 +   1390856 AACAAAG-ATC-TAC------------AGGCACACCG-AAG---------------------TCTG--------------------------------------------------------------------------------------------------
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 22
s Diceros_bicornis.DicBicMic_scaffold_5955                    3119 30 +    198055 AACAAAG-ATC-TAC------------AGGCACACTG-AAG---------------------CCTG--------------------------------------------------------------------------------------------------
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 22
s Eidolon_helvum.KE759718.1                                   8055 35 +     11740 AACAAAG-CTC-AAT------------GGGCACACAG-AAG---------------------CCTAGAGA----G-----------------------------------------------------------------------------------------
i Eidolon_helvum.KE759718.1                              C 0 I 31
s Elaphurus_davidianus.JRFZ01104969.1                       311135 66 +    607251 AACAAAG-ATC-TTT------------GGGCACACAG-AAG---------------------CCTAGAGA----GG-----CTG-G------TCTG-T-G----CCA---------AA-----------------G-----------TC-AGATGAGAGTA--T
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 1
s Ellobius_lutescens.LOEQ01008920.1                          12679 49 -    110024 AACAATA-AGCATTCAGAATAGCAATAAGGCACACAG-AAA---------------------CCTGGAGA----GA----------------------------------------------------------------------------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 28
s Ellobius_talpinus.LOJH01123422.1                            3629 49 +      5358 AACAATA-AGCATACAGAATAGCAATAAGGCACACAG-AAA---------------------CCTAGAGA----GA----------------------------------------------------------------------------------------
i Ellobius_talpinus.LOJH01123422.1                       C 0 I 50
s Enhydra_lutris.KZ291758.1                               16326416 66 -  41312741 AACAGAG-ATC-TGT------------GGGCACACAG-AAG---------------------CCTGGAGA----CG-----CTG-A------TCTG-T-G----CCA---------TA-----------------G-----------TC-AGATGACAGAA--T
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1280404 30 +   4378816 CACAAAT-ATC-TAC------------AGGCACACAG-AAG---------------------CATG--------------------------------------------------------------------------------------------------
i Equus_asinus.JREZ01000139.1                            C 0 I 22
s Equus_caballus.CM000403.2                               18528225 30 -  39960074 CACAAAT-ATC-TAC------------AGGCACACAG-AAG---------------------CATG--------------------------------------------------------------------------------------------------
i Equus_caballus.CM000403.2                              C 0 I 22
s Equus_przewalskii.KK951119.1                               30240 30 +    498745 CACAAAT-ATC-TAC------------AGGCACACAG-AAG---------------------CATG--------------------------------------------------------------------------------------------------
i Equus_przewalskii.KK951119.1                           C 0 I 22
s Erinaceus_europaeus.JH835339.1                           3326696 39 -   7059049 AACAAGA-GTC-CAT------------AAGGATATCA-AAG---------------------CCTGGAGA----GA-----T-G-G------------------------------------------------------------------------------
i Erinaceus_europaeus.JH835339.1                         C 0 I 22
s Erythrocebus_patas.Contig38                             21200783 66 -  21539334 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACGCCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TT-GGATGACAGGA--T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11540 66 +    133382 AACAAAG-ATC-TGT------------GGGCACACAG-AAG---------------------CCTAGAGA----GG-----CTG-G------TCTG-T-G----CCA---------CA-----------------G-----------TC-AGATGAGAGAA--T
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 1
s Eubalaena_japonica.EubJap_flattened_line_31514             25477 66 -     44125 AACAAAG-ATC-TGT------------GGGCACACAG-AAG---------------------CCTAGAGA----GG-----CTG-G------TCTG-T-G----CCA---------CA-----------------G-----------TC-AGATGAGAGAA--T
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 I 1
s Eulemur_albifrons.k141_342033                              10013 62 -     14127 AACACAG-ATC-TAT------------GGGCACACAG-AAG---------------------TCTGGAAA----GG-----TCC-A------T------G----CCG---------TG-----------------G-----------TC-AGATGAGAGAA--T
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                2711 62 -     16928 AACACAG-ATC-TAT------------GGGCACACAG-AAG---------------------TCTGGAAA----GG-----TCC-A------T------G----TCG---------TG-----------------G-----------TC-AGATGAGAGAA--T
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              11744 62 -     25546 AACACAG-ATC-TAT------------GGGCACACAG-AAG---------------------TCTGGAAA----GG-----TCC-G------T------G----CCA---------TG-----------------G-----------TC-AGATGAGAGAA--T
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             8929 62 +     26330 AACACAG-ATC-TAT------------GGGCACACAG-AAG---------------------TCAGGAAA----GG-----TGC-G------T------G----CCA---------TG-----------------G-----------TC-AGATGAGAGAA--T
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 10186 62 +     23973 AACACAG-ATC-TAT------------GGGCACACAG-AAG---------------------TCTGGAAA----GG-----TCC-A------T------G----CCG---------TG-----------------G-----------TC-AGATGAGAGAA--T
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 8929 62 +     75513 aacacag-atc-tat------------gggcacacag-aag---------------------TCTGGAAA----GG-----TGC-G------T------G----CCA---------TG-----------------G-----------TC-AGATGAGAGAA--T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  6881 62 +     97555 aacacag-acc-tat------------gggcacacag-aag---------------------TCTGGAAA----GG-----TCC-A------T------G----CCG---------TG-----------------G-----------TC-AGATGAGAGAA--T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                             9807 62 +     26496 aacacag-atc-tat------------gggcacacag-aag---------------------TCTGGAAA----GG-----TCC-G------T------G----CCG---------TG-----------------G-----------TC-AGATGAGAGAA--T
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                   413 62 -     17153 AACACAG-ATC-TAT------------GGGCACACAG-AAG---------------------TCTGGAAA----GG-----TCC-A------T------G----CCG---------TG-----------------G-----------TC-AGATGAGAGAA--T
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                               9992 62 +    111500 aacacag-acc-tat------------gggcacacag-aag---------------------TCTGGAAA----GG-----TCC-A------T------G----CCG---------TG-----------------G-----------TC-AGATGAGAGAA--T
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20234249 65 + 206538554 AACAAAG-ATC-TAT------------GGGCACCCAG-AAG---------------------CC-GGAGA----TG-----CTG-G------TCTA-T-G----CCA---------TA-----------------G-----------TC-ACATTAGAGAA--G
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20193094 65 + 205367284 AACAAAG-ATC-TAT------------GGGCACCCAG-AAG---------------------CC-GGAGA----TG-----CTG-G------TCTA-T-G----CCA---------TA-----------------G-----------TC-ACATTAGAGAA--G
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  6606 65 -     36744 AACAAAG-ATC-TAT------------GGGCACCCAG-AAG---------------------CC-GGAGA----TG-----CTG-G------TCTA-T-G----CCA---------TA-----------------G-----------TC-ACATTAGAGAA--G
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galagoides_demidoff.k141_31856                              3352  2 -      3432 aa------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Galagoides_demidoff.k141_31856                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_266699                200 66 +      2098 aacaaag-atc-cat------------gggcacacag-GAA---------------------CCTGGAGA----GG-----TTG-G------TTTA-A-G----GCG---------TA-----------------G-----------TC-AGATGAGAGAA--A
i Galeopterus_variegatus.GalVar_scaffold_266699          I 6 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     609100 66 -    660261 AACAGAG-ATT-TGT------------GGGCACATGG-AAG---------------------CCTAGAGA----Gg-----ctg-g------tctg-t-g----cca---------ca-----------------g-----------tc-agatGAGAGAA--T
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 I 1
s Glis_glis.GliGli_scaffold_19807                            30926 36 +     49224 ACTAAAG-ATC-TAT------------GAACACATAG-AAG---------------------CTTGGAGA----GG----------------------------------------------------------------------------------------
i Glis_glis.GliGli_scaffold_19807                        C 0 I 19
s Gorilla_beringei.k141_2022027                               2886 66 +      3305 AACAAAG-ATT-TAA------------GTACACGCAG-AAG---------------------CCTGGAGATGCCAG-----TCG-G------T------G----CCA---------CA-----------------G-----------TC-GGATGAAAGGA--T
i Gorilla_beringei.k141_2022027                          I 33 C 0
s Gorilla_gorilla.LT578341.1                             186333614 66 + 186649187 AACAAAG-ATT-TAA------------GTACACGCAG-AAG---------------------CCTGGAGATGCCAG-----TCG-G------T------G----CCA---------CA-----------------G-----------TC-GGATGAAAGGA--T
i Gorilla_gorilla.LT578341.1                             C 0 I 43
s Graphiurus_murinus.GraMur_scaffold_10447                   30646 36 +     78134 AACAAAG-ATC-TAT------------AAGCACATAT-AAA---------------------CCTAGAGA----GG----------------------------------------------------------------------------------------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 19
s Hapalemur_alaotrensis.k141_170648                           3077 62 -     19426 AACAAAG-ATC-TAT------------GAGCACACAG-AAG---------------------TCTGGAAA----GG-----TCT-G------T------G----CCG---------TG-----------------G-----------TC-AGATGAGAGAA--T
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              8221 62 -     15286 AACAAAG-ATC-TAT------------GAGCACACAG-AAG---------------------TCTGGAAA----GG-----TCT-G------T------G----CCG---------TG-----------------G-----------TC-AGATGAGAGAA--T
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                              9859 62 +     18253 AACAAAG-ATC-TAT------------GAGCACACAG-AAG---------------------TCTGGAAA----GG-----TCT-G------T------G----CCG---------TG-----------------G-----------TC-AGATGAGAGAA--T
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                          9962 62 -     41752 aacaaag-atc-tat------------gagcacacag-aag---------------------TCTGGAAA----GG-----TCT-G------T------G----CCG---------TG-----------------G-----------TC-AGATGAGAGAC--T
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                          9795 62 -     16460 aacaaag-atc-tat------------gagcacacag-aag---------------------TCTGGAAA----GG-----TCT-G------T------G----CCG---------TG-----------------G-----------TC-AGATGAGAGAA--T
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               239379 66 +    327341 AACAAAA-CTC-TAT------------GGGCACTCAG-AAG---------------------CCTGGAGA----TG-----CTG-G------TCTA-T-G----CCA---------CA-----------------G-----------TC-AGGTGAGACAG--T
i Helogale_parvula.HelPar_flattened_line_2585            I 233 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18304 66 +     36099 AACAAAG-ATC-TGT------------GGGCACATGG-AAG---------------------CCTAGAGA----GG-----CGA-G------TCTG-T-G----CCA---------CA-----------------G-----------TC-AGATGAGAGAA--C
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 I 1
s Hipposideros_armiger.JXIK01000431.1                       108951 31 +   1711038 -------------------------------------------------------------------------------------G------TCTG-C-CTGTGCTA---------Tg-----------------g-----------tc-agatgagacaa--t
i Hipposideros_armiger.JXIK01000431.1                    I 30 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               40387 31 +     43066 -------------------------------------------------------------------------------------G------TCTG-C-CTGTGATA---------Tg-----------------g-----------tc-agatgaggcaa--t
i Hipposideros_galeritus.HipGal_scaffold_29171           I 30 C 0
s Hoolock_leuconedys.ctg274                                    430358 66 +    630532 AACAAAG-ATC-TAA------------GCACACGCAG-AAG---------------------CCTGGAGATGCCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGAGAGGA--T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  41537 66 +     55795 AACAAAG-ATC-TAT------------GGGCACCCAG-AAG---------------------CCTGGAGA----TG-----CTC-A------TCTA-T-G----CTA---------TA-----------------G-----------TC-AGATGAGAAAA--T
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_307679                               13289 66 -     15490 AACAAAG-ATC-TAA------------GCACACGCAG-AAG---------------------CCTGGAGATGCCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGAGAGGA--T
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              55295 66 +     67168 AACAAAG-ATC-TAA------------GCACACGCAG-AAG---------------------CCTGGAGATGCCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGAGAGGA--T
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189538945 66 - 191637585 AACAAAG-ATC-TAA------------GCACACGCAG-AAG---------------------CCTGGAGATGCCAA-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGAGAGGA--T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3331838 66 -  11177569 AACAAAG-ATC-TAA------------GCACACGCAG-AAG---------------------CCTGGAGATGCCAA-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGAGAGGA--T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7515183 61 -   7955117 CACAAAG-GTC-TAT------------GAGCA--CAG-AAG---------------------CTTGGGGA----AA-----G-G-G------T-AAGT-G----TCA---------CA-----------------A-----------TT-AGA--TGAGAA--T
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   18778 62 +     31101 aacagag-atc-tat------------ggacacacag-agg---------------------aCTAGAAA----GG-----TCT-G------T------G----CTG---------TG-----------------G-----------TT-AGATGAGAGAA--T
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               23081 66 +     23964 AACAAAG-ATC-TGT------------GGGCGCACAG-AAG---------------------CCTAGAGA----GG-----CTG-G------TCTG-T-G----CCA---------CA-----------------G-----------TC-AGATGAGAGAA--T
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 I 1
s Jaculus_jaculus.JH725527.1                               8272284 36 -   9596543 gacaatg-ACC-TAT------------GAGTGCCCAG-AAA---------------------CCTGGAGA----GG----------------------------------------------------------------------------------------
i Jaculus_jaculus.JH725527.1                             C 0 I 29
s Kogia_breviceps.KogBre_flattened_line_192630                2439 66 -      3359 AACAAAG-ATC-TGT------------AGGCACACAG-AAG---------------------CCTAGAGA----GG-----CTG-G------TCTG-T-G----CCA---------CA-----------------G-----------TC-AGATGAGAGAA--T
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 I 7
s Lemur_catta.scaffold_24                                 15520322 62 -  30322482 aacaaag-atc-tat------------gagcacacag-aag---------------------TCTGGAAA----GG-----TCT-G------T------G----CCG---------TG-----------------G-----------TC-AGATGAGAGAA--T
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          7233 62 -     23766 aatagag-atc-tat------------gggcacacag-aCA---------------------CCTGGAAA----GG-----TCT-G------T------G----CTG---------TG-----------------G-----------TC-AGATGAGAGAA--T
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             25180 62 +     45836 aatagag-atc-tat------------gggcacacag-aCG---------------------CCTGGAAA----GG-----TCT-G------T------G----CTG---------TG-----------------G-----------TC-AGATGAGAGAA--T
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_582783                          1054 62 -      1589 aacagag-atc-tat------------gggcacacag-aCG---------------------CCTGGAAA----GG-----TCT-G------T------G----CTG---------TG-----------------G-----------TC-AGATGAGAGAA--T
i Lepilemur_ruficaudatus.k141_582783                     I 158 I 159
s Lepilemur_septentrionalis.k141_185316                      23235 62 +     54090 aatagag-atc-tat------------gggcacacag-aCG---------------------CCTGGAAA----GG-----TCT-G------T------G----CTG---------TG-----------------G-----------TC-AGATGAGAGAA--T
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3039565 66 +   3914936 AACAAAG-ATC-TAT------------GGGCACACAG-AAG---------------------CCTAGAGA----GA-----ATG-A------TCTG-T-G----CCA---------TA-----------------G-----------TC-AGATGAGAGAA--T
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             268133 66 -    662738 AACAAAG-ATC-TGT------------GAGCACACAG-AAG---------------------CCTAGAGA----GG-----CTG-G------TCTG-T-G----CCA---------CA-----------------G-----------TC-AGATGAGAGAA--T
i Lipotes_vexillifer.KE559953.1                          C 0 I 1
s Lophocebus_aterrimus.ctg367                              1432714 66 +   1826925 AATAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACGCCAG-----TCG-G------T------G----CCA---------CA-----------------G-----------TC-GGAGGAGAGGA--T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            1271 66 +     11245 aacaaa-gatc-tat------------gggcacacag-aag---------------------CCTAGAGA----GGTTGG-TCT-G------t------a----ctg---------tg-----------------g-----------tc-agataagataa--t
i Loris_lydekkerianus.k141_2539221                       C 0 I 469
s Loris_tardigradus.ctg83                                  1000108 66 +   6120653 aacaaa-gatc-tat------------gggcacacag-aag---------------------CCTAGAGA----GGTTGG-Tct-g------t------a----ctg---------tg-----------------g-----------tc-agataagataa--t
i Loris_tardigradus.ctg83                                C 0 I 469
s Lycaon_pictus.CM007581.1                                17952345 65 -  59628241 AACAAAG-ATC-TAT------------AGGTACACAG-AAG---------------------CCTAGAGA----GG-----CTG-A------TCT--T-G----CCA---------TA-----------------G-----------TC-ACATGAGAGAA--T
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               2535 66 +     40492 AACAAAG-ATC-TAA------------GTGCGCACAG-AAG---------------------CCTGGAGACGCCAG-----TCA-G------T------G----CCA---------CA-----------------G-----------TC-GAAGGAGAGGA--T
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59671790 66 +  60120075 AACAAAG-ATC-TAA------------GTGCACACAG-AAG---------------------CCTGGAGACGCCAG-----TCA-G------T------G----CCA---------CA-----------------G-----------TC-GGAGGAGAGGA--T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  8290 66 -     26193 AACAAAG-ATC-TAA------------GTGCACACAG-AAG---------------------CCTGGAGACGCCAG-----TCA-G------T------G----CCA---------CA-----------------G-----------TC-GGAGGAGAGGA--T
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            76087 66 -    114318 AACAGAG-ATC-TAA------------GTGCACACAG-AAG---------------------CCTGGAGACGCCAG-----TCA-G------T------G----CCA---------CA-----------------G-----------TC-GGAGGAGAGGA--T
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  1802 66 -     23192 AACAAAG-ATC-TAA------------GTGCACACAG-AAG---------------------CCTGGAGACGCCAG-----TCA-G------T------G----CCA---------CA-----------------G-----------TC-AGAGGAGAGGA--T
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                11255 66 -     29190 AACAAAG-ATC-TAA------------GTGCACACAG-AAG---------------------CCTGGAGACGCCAG-----TCA-G------T------G----CCT---------CA-----------------G-----------TC-GGAGGAGAGGA--T
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  19822 66 +     37952 AACAAAG-ATC-TAA------------GTGCACACAG-AAG---------------------CCTGGAGACGCCAG-----TCA-G------T------G----CCT---------CA-----------------G-----------TC-GGAGGAGAGGA--T
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834910 66 + 187317192 AACAAAG-ATC-TAA------------GTGCACACAG-AAG---------------------CCTGGAGACGCCAG-----TCA-G------T------G----CCA---------CA-----------------G-----------TC-GGAGGAGAGGA--T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25453473 66 -  25927173 AACAAAG-ATC-TAA------------GTGCACACAG-AAG---------------------CCTGGAGACGCCAG-----TCA-G------T------G----CCA---------CA-----------------G-----------TC-GGAGGAGAGGA--T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  75671 66 +     89720 AACAAAG-ATC-TAA------------GTGCACACAG-AAG---------------------CCTGGAGACGCCAG-----TCA-G------T------G----CCT---------CA-----------------G-----------TC-GGAGGAGAGGA--T
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 2669 66 +     20474 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACGCCAG-----TCA-G------T------G----CCA---------CA-----------------G-----------TC-GGAGGAGAGGA--T
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   2470 66 -     14993 AACAAAG-ATC-TAA------------GTGCACACAG-AAG---------------------CCTGGAGATGCCAG-----TCA-G------T------G----CCT---------CA-----------------G-----------TC-GGAGGAGAGGA--T
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  325342 66 -    668171 AACAAAG-ATC-TAA------------GTGCACACAG-AAG---------------------CCTGGAGACGCCAG-----TCA-G------T------G----CCT---------CA-----------------G-----------TC-GGAGGAGAGGA--T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                  773 66 -     24072 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACCCCAG-----TCA-G------T------G----CCA---------CA-----------------G-----------TT-GGAGGAGAGGA--T
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               21409 66 -     45290 AACAAAG-ATC-TAA------------GTGCACACAG-AAG---------------------CCTGGAGACGCCAG-----TCA-G------T------G----CCA---------CA-----------------G-----------TC-GGAGAAGAGGA--T
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88144 35 +     94391 aacaaag-ttc-aat------------gggcacaaag-aag---------------------cctagaGa----g-----------------------------------------------------------------------------------------
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 31
s Mandrillus_leucophaeus.scaffold280                      23932957 66 -  24302211 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACGCCAG-----TCG-G------T------G----CCA---------CA-----------------G-----------TC-GGAGGAGAGGA--T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               347134 66 +    752769 AACAAAG-ATC-TCA------------GTGCACGCAG-AAG---------------------CCTGGAGACGCCAG-----TCG-G------T------G----CCA---------CA-----------------G-----------TC-GGAGGAGAGGA--T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              16222 66 +    737560 aacaaag-ATG-TAT------------GGGCACACAG-AAG---------------------CTTGCAGA----GG-----CTG-A------TCTG-T-A----CCA---------TG-----------------G-----------TC-AAATGATAGAA--T
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              47607 66 -    317179 aacaaag-gtg-tat------------gggcacacag-aag---------------------CTTGCAGA----GG-----CTG-A------TCTG-T-A----CCA---------Tg-----------------g-----------tc-aaatgagagaa--t
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33098032 61 -  40650429 CACAAAG-GTC-TAT------------GAGCA--CAG-AAG---------------------CTTGGGGA----AA-----G-G-G------TC-AGT-G----TCA---------CA-----------------A-----------TT-AGA--TGAGAA--T
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         7426 36 -    207569 AACGAAG-ATC-ACT------------GGGTACAGAG-AAG---------------------CCTAGAGA----GG----------------------------------------------------------------------------------------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 34
s Mellivora_capensis.MelCap_flattened_line_69365              7124 66 +     13704 AACAGAG-ATA-TGT------------GGGCACACAG-AAG---------------------CGTGGAGA----CA-----CTG-A------TCTG-T-G----CTA---------TA-----------------G-----------TC-AGATGAGAGAA--T
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 28168 41 +    140813 AAGAGTA-AGCATATAGAATGTCAA--------GCAG-AAA---------------------CCTGTAGA----TA----------------------------------------------------------------------------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 30
s Mesocricetus_auratus.KB708134.1                         12178267 49 -  29670104 GACAATA-AGCAGGCAGAATAACAAtaagccacacag-aaa---------------------cctgcAGA----GA----------------------------------------------------------------------------------------
i Mesocricetus_auratus.KB708134.1                        C 0 I 29
s Mesoplodon_bidens.MesBid_scaffold_108144                    3749 66 +     10310 AACAAAG-ATC-TGT------------GGGCACACAG-AAG---------------------CCTAGAGA----GG-----CTG-G------TCTG-T-G----CCA---------CA-----------------G-----------TC-AGATGAGAGAA--T
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 I 1
s Microcebus_murinus.CM007674.1                           18287717 62 -  93316391 AACAGAG-ATC-TAT------------GGGCACACAG-ATG---------------------CCTGGAAA----AG-----TCT-G------T------G----CTG---------TG-----------------G-----------TC-AGATGAGAGAA--A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11256595 49 -  27267610 AACAATA-AGCATTCAGAATAGCAATACGGCACACAG-AAG---------------------CCTAGAGA----GA----------------------------------------------------------------------------------------
i Microtus_ochrogaster.CM001695.1                        C 0 I 174
s Miopithecus_ogouensis.k141_534055                           4708 66 -     28506 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACGCCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGACAGGA--T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         2401 66 -      8324 AACAAAG-ATC-TAT------------GGGCACACAG-AAG---------------------CCTAGAGA----GA-----ATG-A------TCTG-T-G----CCA---------TA-----------------G-----------TC-AGATGAGAGAA--T
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      5285 62 -     37649 aacagag-atc-tat------------gggcacacag-aTG---------------------CCTGGAAA----AG-----TCT-G------T------G----CTG---------TG-----------------G-----------TC-AGATGAGAGAA--A
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    27254 66 -    437263 AACAAAG-ATC-GGT------------GGGCACACAG-AAG---------------------TCTAGAGA----GG-----CTG-G------TCTG-T-G----CCA---------CA-----------------G-----------TC-AGATGAGAGAA--T
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 1
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138484 35 -    366855 --------------------------------------------------------------------------------------------------------GC-----------TGGTCTGTCTGTTCCATGG-----------TC-ACATGAGACAG--T
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 37 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   1184 66 +     82753 AACAAAG-ATC-TGT------------GGGCACATGG-AAG---------------------CCTAGAGA----GG-----CTG-G------TCGG-T-G----CCA---------CA-----------------G-----------TC-AGATGAGAGAA--T
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 1
s Mungos_mungo.MunMun_flattened_line_23663                   32482 66 +     37127 AACAAAA-CTC-TAT------------GGGCACTCAG-AAG---------------------CCTGGAGA----TG-----CTG-G------TCTA-T-G----CCA---------CA-----------------G-----------TC-AGGTGAGACAG--T
i Mungos_mungo.MunMun_flattened_line_23663               I 242 C 0
s Mus_caroli.LT608237.1                                   84357229 49 - 120012414 AATAATA-AGCACATAGAATAACAATATGGCCTACAG-AAA---------------------CCTGGAGA----GA----------------------------------------------------------------------------------------
i Mus_caroli.LT608237.1                                  I 13 I 28
s Mus_musculus.chr8                                       87646202 49 - 129401213 aataata-agcacatagaataacaatatagcatacag-aaA---------------------CCTGGAGA----GA----------------------------------------------------------------------------------------
i Mus_musculus.chr8                                      C 0 I 28
s Mus_spretus.CM004101.1                                  90748276 49 - 130317789 aataata-agcacatagaataacaatatagcatacag-aaA---------------------CCTGGAGA----GA----------------------------------------------------------------------------------------
i Mus_spretus.CM004101.1                                 C 0 I 28
s Muscardinus_avellanarius.MusAve_scaffold_82313              2958 25 +     14296 AACA--G-ATC-TAT------------GAGCACCAAG-AAA---------------------C-----------------------------------------------------------------------------------------------------
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 18
s Mustela_putorius.JH418006.1                               298314 66 -  14710649 AACAGAG-ATC-TGT------------GGGCACACAG-AAG---------------------CCTGGAGA----CA-----CTG-A------TCTG-C-G----CCA---------TA-----------------G-----------TC-AGATGAGAGAA--T
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186690 43 +    196477 ---------------------------TGGCTTACAG-AAG---------------------CTTGGAGA----AG-----CA--A------TCTG-T-G----CCA---------AA-----------------G-----------TC-GGA-----------
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.AXCS01343547.1                            197 36 +       996 AACAACA-ACC-TAT------------GCACATACAG-AAA---------------------CCTAGGGA----GA----------------------------------------------------------------------------------------
i Nannospalax_galili.AXCS01343547.1                      C 0 I 29
s Nasalis_larvatus.k141_413338                               10708 66 +     21681 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACACCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGAGGGGA--T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5866210 66 +   7148211 AACAAAG-ATC-GGT------------GGGCACACAG-AAG---------------------TCTAGAGA----GG-----CTG-G------TCTG-T-G----CCA---------CA-----------------G-----------TC-AGATGAGAGAA--T
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 1
s Noctilio_leporinus.NocLep_scaffold_251                    756998 33 +    783361 AACTAAG-ACT-AAT------------GGGCATATGG-AAG---------------------CCTAGAG-----------------------------------------------------------------------------------------------
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 22
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146606 65 -   9404916 AACAAAG-ATC-TAT------------GGGTACACAG-AAG---------------------CCTAGAGA----GG-----CTG-A------TCT--T-G----CCA---------TA-----------------G-----------TC-ACATGAGGGAA--T
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102575091 66 - 196305487 aacaaa-gatc-tat------------ggatacacag-aag---------------------CCTGGAGA----GTTTGA-TCT-G------T------A----CTG---------TG-----------------G-----------tc-agataagataa--t
i Nycticebus_bengalensis.LG01                            C 0 I 469
s Nycticebus_coucang.k141_5327727                             2777 66 +      8486 AACAAA-GATC-TAT------------GGATACACAG-AAG---------------------CCTGGAGA----GTTTGA-TCT-G------T------A----CTG---------tg-----------------g-----------tc-agataagataa--t
i Nycticebus_coucang.k141_5327727                        C 0 I 469
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105745518 66 + 199412804 aacaaa-gatc-tat------------ggatacacag-aag---------------------CCTGGAGA----GGTTGA-Tct-g------t------a----ctg---------tg-----------------g-----------tc-agataagataa--t
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 469
s Odobenus_rosmarus.KB229312.1                              503707 66 -   2017862 AACCAAG-ATC-TAT------------GGGCACACAG-AAG---------------------CCTAGAGA----GA-----ATG-A------TCTG-T-G----CCA---------TA-----------------G-----------TC-AGATGAAAGAA--T
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         145825  6 +    630418 aacaaa--------------------------------------------------------------------------------------------------------------------------------------------------------------
i Odocoileus_virginianus.KZ100018.1                      C 0 I 4
s Okapia_johnstoni.LVCL01S0005463.1                          77017 66 -    150152 AACAGAG-ATC-TGT------------GGGCACATGG-AAG---------------------ACTAGAGA----GG-----CTG-G------ACTG-T-G----CCA---------CA-----------------G-----------TC-AGATGAGAGAA--T
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 1
s Ondatra_zibethicus.OndZib_scaffold_46174                   16933 49 +     28053 AACAATA-AGCATACAGAACAGCAATAAGGCACAAAG-AAG---------------------CCTGGAGA----GA----------------------------------------------------------------------------------------
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 29
s Onychomys_torridus.OnyTor_scaffold_2986                    75035 49 +    102263 AACAATA-AACATACAGAATAACAATACTGCACACAG-AAA---------------------CATGTAGA----CA----------------------------------------------------------------------------------------
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 29
s Orcinus_orca.KB316932.1                                  2782133 66 -  10937097 AACAAAG-ATC-GGT------------GGGCACACAG-AAG---------------------CCTAGAGA----GG-----CTG-G------TCTG-T-G----CCA---------CA-----------------G-----------TC-AGATGAGAGAA--T
i Orcinus_orca.KB316932.1                                C 0 I 1
s Otocyon_megalotis.JAEUCK010005147.1                       459360 65 -    559221 AACAAAG-ATC-TAT------------GGGTACACAG-AAG---------------------CCTAGAGA----GG-----CTG-A------TCT--T-G----CCA---------TA-----------------G-----------TC-ACATGAGAGAA--T
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17586279 66 +  44047080 AACAAAG-ATC-TGT------------GGGCACATGG-AAG---------------------CCTAGAGA----GG-----Cga-g------tctg-t-g----cca---------ca-----------------g-----------tc-agatGAGAGAA--C
i Ovis_aries.CM001607.2                                  C 0 I 1
s Ovis_canadensis.OviCan_scaffold_2572                      174256 66 -    191736 AACAAAG-ATC-TGT------------GGGCACATGG-AAG---------------------CCTAGAGA----GG-----CGA-G------TCTG-T-G----CCA---------CA-----------------G-----------TC-AGATGAGAGAA--C
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 I 1
s Pan_paniscus.KQ411613.1                                    39583 66 +     80009 AACAATG-ATT-TAA------------GTACACGCAG-AAG---------------------CCTGGAGATGCCAG-----TCG-G------T------G----CCA---------CA-----------------G-----------TC-GGATGAAAGGA--T
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189138476 66 + 189151597 AACAAAG-ATT-TAA------------GTACACGCAG-AAG---------------------CCTGGAGATGCCAG-----TCG-G------T------G----CCA---------CA-----------------G-----------TC-GGATGAAAGGA--T
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  148255 65 +    230217 AACAAAG-ATC-TAT------------GGGCACCCAG-AAG---------------------CC-GGAGA----TG-----CTG-G------TCTA-T-G----CTA---------TA-----------------G-----------TC-ATATTAGAGAA--G
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                261462 65 +  18783137 AACAAAG-ATC-TAT------------GGGCACCCAG-AAG---------------------CC-GGAGA----TG-----CTG-G------TCTA-T-G----CTA---------TA-----------------G-----------TC-ATATTAGAGAA--G
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4718099 65 -   8748460 AACAAAG-ATC-TAT------------GGGCACCCAG-AAG---------------------CC-GGAGA----TG-----CTG-G------TCTA-T-G----CTA---------TA-----------------G-----------TC-ATATTAGAGAA--G
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1265173 66 -   2937107 AACAAAG-ACC-TGT------------GGGCACATGG-AAG---------------------CCTAGAGA----GG-----TGA-G------TCTA-T-G----CCA---------CA-----------------G-----------TC-AGATGAGAGAA--T
i Pantholops_hodgsonii.KE114653.1                        C 0 I 1
s Papio_anubis.CM001495.2                                183438743 66 + 183742232 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACGCCAG-----TCG-G------T------G----CCA---------CA-----------------G-----------TC-GGAGGAGAGGA--T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             2436 66 +     20448 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACGCCAG-----TCG-G------T------G----CCA---------CA-----------------G-----------TC-GGAGGAGAGGA--T
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20559241 66 +  20919399 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACGCCAG-----TCG-G------T------G----CCA---------CA-----------------G-----------TC-GGAGGAGAGGA--T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   1179 66 +     41871 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACGCCAG-----TCG-G------T------G----CCA---------CA-----------------G-----------TC-GGAGGAGAGGA--T
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     4465 66 +     27711 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACGCCAG-----TCG-G------T------G----CCA---------CA-----------------G-----------TC-GGAGGAGAGGA--T
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  4550 66 +      9205 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACGCCAG-----TCG-G------T------G----CCA---------CA-----------------G-----------TC-GGAGGAGAGGA--T
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9720 66 -     78924 AACAAAG-ACC-TAT------------GGGCACCCCA-AAG---------------------CCTGGAGA----TG-----CTG-G------TCTA-T-G----CCA---------TA-----------------G-----------TC-AGATGACAGAA--T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            5265 66 +     13100 AACAAA-GATC-TAT------------GGGCACACAG-AAG---------------------CCTGGAGA----GGCTGA-TCT-G------t------a----ctg---------tg-----------------g-----------tc-agataagacaa--t
i Perodicticus_ibeanus.k141_855320                       C 0 I 477
s Perodicticus_potto.k141_1092580                             3638 66 +     25941 aacaaa-gagc-tat------------gggcacacag-aag---------------------CCTGGAGA----GGCTGA-TCT-g------t------a----ctg---------tg-----------------g-----------tc-agataagacaa--t
i Perodicticus_potto.k141_1092580                        C 0 I 477
s Peromyscus_maniculatus.KI615324.1                       18187821 49 -  18517816 aacaata-aacatacagaataagaataaGGCACACAG-AAT---------------------CCTGTAGA----GA----------------------------------------------------------------------------------------
i Peromyscus_maniculatus.KI615324.1                      C 0 I 29
s Phocoena_phocoena.PhoPho_flattened_line_24159               9172 66 +     63832 AACAAAG-ATC-GGT------------GGGCACACAG-AAG---------------------TCTAGAGA----GG-----CTG-G------TCTG-T-G----CCA---------CA-----------------G-----------TC-AGATGAGAGAA--T
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 1
s Piliocolobus_badius.k141_1234363                           39220 66 +     62158 AACTAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACGCCAG-----TCG-G------G------G----CCA---------TA-----------------G-----------TC-GGATGAGAGGA--T
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        33942 66 +     89929 AACTAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACGCCAG-----TCG-G------G------G----CCA---------TA-----------------G-----------TC-GGATGAGAGGA--T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            35358 66 +     51399 AACTAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACGCCAG-----TCG-G------G------G----CCA---------TA-----------------G-----------TC-GGATGAGAGGA--T
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14291594 66 -  14605196 AACTAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACGCCAG-----TCG-G------G------G----CCA---------TA-----------------G-----------TC-GGATGAGAGGA--T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34878 66 +     35617 AACAAAG-ATC-TGT------------GGGCACACAG-AAG---------------------CCTAGAGA----GG-----CTG-G------TCTG-T-G----CCA---------CA-----------------G-----------TC-AGATGAGAGAA--T
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 I 1
s Pongo_abelii.CM009266.2                                189126668 66 + 189387572 AACAAAG-ATC-TAA------------GTACACGCAG-AAG---------------------CCTAGAGATGCCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGAGAGGA--T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9566274 66 +   9816681 AACAAAG-ATC-TAA------------GTACACGCAG-AAG---------------------CCTAGAGATGCCAG-----TCG-G------T------G----CCA---------CA-----------------G-----------TC-GGATGAGAGGA--T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68869 66 -     81375 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACACCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGAGGGGA--T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                               690 66 +     19060 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACACCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGAGGGGA--T
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2592974 62 -   4620579 aacaaAG-ATC-TAT------------GAGCACACAA-AAG---------------------TCTGGAAA----GG-----TCT-G------T------A----CCA---------TG-----------------G-----------TC-AGATGAGAGAA--T
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     986987 62 +   2598838 AACAGAG-ATC-TAT------------GGGCACACAG-AAG---------------------CCTGGACA----GG-----TCT-G------T------G----CCG---------TG-----------------G-----------TT-AGATGAGAGAA--T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          25276 62 +     38485 AACAGAG-ATC-TAT------------GGGCACACAG-AAG---------------------CCTGGACA----GG-----TCT-G------T------G----CCG---------TG-----------------G-----------TT-AGATGAGAGAA--T
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             1435 62 +      4256 AACAGAG-ATC-TAT------------GGGCACACAG-AAG---------------------CCTGGACA----GG-----TCT-G------T------G----CCG---------TG-----------------G-----------TT-AGGTGAGAGAA--T
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22795 62 +     35766 aacagag-atc-tat------------gggcacacag-aag---------------------cctggaca----gg-----tct-g------t------g----ctg---------tg-----------------g-----------tt-aggTGAGAGAA--T
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                            978 62 -     24134 AACAGAG-ATC-TAT------------GGGCACACAG-AAG---------------------CCTGGACA----GG-----TCT-G------T------G----CCG---------TG-----------------G-----------TT-AGATGAGAGAA--T
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24790 62 -     67325 aacagag-atc-tat------------gggcacacag-aag---------------------CCTGGACA----GG-----TCT-G------T------G----CCG---------TG-----------------G-----------TT-AGATGAGAGAA--T
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           1035 62 -      6182 AACAGAG-ATC-TAT------------GGGCACACAG-AAG---------------------CCTGGACA----GG-----TCT-G------T------G----CCG---------TG-----------------G-----------TT-AGATGAGAGAA--T
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11875 34 -     21811 --------------------------------------------------------------------------------------------------------GC-----------TG-TCTGTCTGCGCCATGG-----------TC-AGATGAGACAA--C
i Pteronotus_parnellii.KE909381.1                        I 37 C 0
s Psammomys_obesus.NESX01036370.1                             5801 49 -     21651 AAGAGTA-AGCATATAGAATGTCAATAAGGCAAAAAG-AAA---------------------CCTGTAGA----TA----------------------------------------------------------------------------------------
i Psammomys_obesus.NESX01036370.1                        C 0 I 30
s Pteronura_brasiliensis.PteBra_flattened_line_31117         37324 66 +     42204 AACAGAG-ATC-TGT------------GGGCACACAG-AAG---------------------CCTGGAGA----CA-----CTG-A------TCTG-T-G----CCA---------TA-----------------G-----------TC-AGATGAGAGAA--T
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1357450 31 +   4952924 -------------------------------------------------------------------------------------N------NNNN-N-NNNNGCCA---------Tg-----------------g-----------tc-agatgagacag--t
i Pteropus_vampyrus.KN525825.1                           I 1374 C 0
s Pteropus_alecto.KB030862.1                              22974327 34 +  28871421 AACAAAG-CTC-AGT------------AGGCACACAG-AAA----------------------CTAGAGA----G-----------------------------------------------------------------------------------------
i Pteropus_alecto.KB030862.1                             C 0 I 31
s Puma_concolor.QAVW01001104.1                            20271381 65 -  38429054 AACAAAG-ATC-TAT------------GGGCACCCAG-AAG---------------------CC-GGAGA----TG-----CTG-G------TCTA-T-G----CCA---------TA-----------------G-----------TC-ACATTAGAGAA--G
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             10701 66 -     91421 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACACCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGAGGGGA--T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7604829 66 +   7812017 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACACCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGAGGGGA--T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10670 66 -     72585 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACACCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGAGGGGA--T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5756 66 +     55207 AACAAAG-ATC-TTT------------GGGCACACAG-AAG---------------------CCTAGAGA----GG-----CTG-G------TCTG-T-G----CCA---------AA-----------------G-----------TC-AGATGAGAGTA--T
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 1
s Rattus_norvegicus.chr16                                 53566093 70 +  90668790 AATAATA-AGCATAAAGAATAATAATGTGGCATATAG-AAGACATATGAGGTATGTCCATGATGTGGAGA----GA----------------------------------------------------------------------------------------
i Rattus_norvegicus.chr16                                C 0 I 28
s Rhinolophus_sinicus.LVEH01000134.1                        367466 16 -   3329780 GTGTAGT-ATC-AGG------------TGG--------------------------------------------------------------------------------------------------------------------------------------
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 20
s Rhinopithecus_bieti.k119_217274                             2385 66 -     11128 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACACCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGAGGGGA--T
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91231740 66 - 195417433 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACACCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGAGGGGA--T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7667389 66 +   7961872 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACACCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGAGGGGA--T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85326 35 -     96226 AACAAAG-CTC-AAT------------AGGCACACAG-AAG---------------------CCTAGAGA----G-----------------------------------------------------------------------------------------
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 31
s Scalopus_aquaticus.ScaAqu_scaffold_662                    151997 33 -    313613 AACAAAG-ATT-GAT------------GGACACACAG-AAA---------------------CTTGCAG-----------------------------------------------------------------------------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 16
s Semnopithecus_entellus.k141_11662                          15213 66 -     19888 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACACCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGAGGGGA--T
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      22415 66 +     39453 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACACCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGAGGGGA--T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            2941 66 +     27826 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACACCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGAGGGGA--T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             2462 66 -     19483 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACACCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGAGGGGA--T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      2524 66 +      7198 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACACCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGAGGGGA--T
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         10784 66 +     15514 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACACCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGAGGGGA--T
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            188283 70 -    191337 AGCAATG-ATC-TTT------------GGGAACACAG-AAG---------------------CCTGGAAA----GG-----CTG-G------TCTG-T-GTGTGTCA---------TA-----------------G-----------TC-AGATGAAAGAA--T
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13648480 65 -  18376816 atataat-acc-taA------------AGGCATACAG-AAA---------------------CCAAAAGA----GG-----TTG-G------TCTG-T-TT-----C---------TA-----------------C-----------TC-AGATAAGAGGA--T
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1948815 61 -   3870691 CACAAAG-GTC-TAT------------GAGCA--CAG-AAG---------------------CTTGGGGA----AA-----G-G-G------T-AAGT-G----TCA---------CA-----------------A-----------TT-AGA--TGAGAA--T
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27841 65 +     97271 AACAAAG-ATC-T-T------------GGGCTCACAG-AAG---------------------CCTGGAGA----GG-----CTG-A------TC-AGT-G----CCA---------TA-----------------G-----------TC-AGATGAGAGAC--T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              15388 66 -    196729 AACAAAA-CTC-TAT------------GGGCACTCAG-AAG---------------------CCTGGAGA----TG-----CTG-G------TCTA-T-G----CCA---------TA-----------------G-----------TC-AGGTGAGACAG--T
i Suricata_suricatta.SurSur_flattened_line_6629          I 241 C 0
s Sus_scrofa.JH118708.1                                      32366 64 -     47482 -ACAAGG-ATC-TAT------------AGGCACACAG-AAG---------------------CCTAGCAA----AG-----CT--G------TCTG-T-G----CCA---------TA-----------------G-----------TC-AGATGAGAGAA--T
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1088989 66 -   1523678 AACAAAG-ATC-TAA------------GCACACGCAG-AAG---------------------CCTGGAGATGCCAG-----TTG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGAGAGGA--T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 7434 33 +     41958 AACAAAG-CCC-AAC------------AGGCATACAG-AAG---------------------CCTGGCG-----------------------------------------------------------------------------------------------
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 24
s Tamandua_tetradactyla.TamTet_scaffold_1782                 70044 43 +    116680 ---------------------------TGGCTTACAG-AAG---------------------CCTGGAGA----AG-----CA--A------TCTG-T-G----CCA---------CA-----------------G-----------TT-GGA-----------
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115846 30 -    156842 aacaaag-atg-tac------------aggcacacag-aAA---------------------CCTG--------------------------------------------------------------------------------------------------
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 22
s Tapirus_terrestris.TapTer_scaffold_755                    384297 30 +    539355 aacaaag-atg-tac------------aggcacacag-aAA---------------------CCTG--------------------------------------------------------------------------------------------------
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 22
s Tarsius_lariang.k141_2201908                               11246 66 +     70052 aacaatg-atc-tat------------gggcacgtgg-aga---------------------cctggaAG----AAC-GGCTGT-G------T------G----CCA---------TG-----------------G-----------TC-AGATGAGAGGA--C
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               15551 66 +     25099 AACAATG-ATC-TAT------------GGGCACGTGG-AGA---------------------CCTGGAAG----AAC-GGCTGT-G------T------G----CCA---------TG-----------------G-----------TC-AGATGAGAGGA--C
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186423787 66 + 186847797 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACGCCGG-----TCG-G------T------G----CCA---------CA-----------------G-----------TC-GGAGGAGAGGA--T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   2632 21 +      8208 ---------------------------------------------------------------------------------------------------G----CCA---------CA-----------------G-----------TC-AGGTGAGAGAA--T
i Tolypeutes_matacus.TolMat_scaffold_228639              I 25 C 0
s Trachypithecus_auratus.k141_722599                          6515 66 -     20410 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACACCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGAGGGGA--T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    10711 66 +     15221 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCCGGAGACACCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGAGGGGG--T
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        6616 66 +     19930 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACACCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGAGGGGA--T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       3046 66 -     19997 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACACCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGAGGGGA--T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            43165 66 -     60166 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACACCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGAGGGGA--T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        10638 66 -     27529 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACACCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGAGGGGA--T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     10578 66 -     18194 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACACCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-AGATGAGGGGA--T
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           4313 66 -     21137 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACACCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGAGGGGA--T
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    3016 66 -     10723 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACACCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGAGGGGA--T
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         2168 66 +      9834 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCCGGAGACACCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGAGGGGA--T
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        20486 66 +     32220 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACACCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGGGGGGA--T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5934583 66 +   6242583 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCCGGAGACACCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGAGGGGA--T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        3830 66 +     20839 AACAAAG-ATC-TAA------------GTGCACGCAG-AAG---------------------CCTGGAGACACCAG-----TCG-G------T------G----CCA---------TA-----------------G-----------TC-GGATGACGGGA--T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                   1430 66 -      1748 AACAAAG-ATT-TGT------------GGACACATGG-AAG---------------------CCTAGAGA----GG-----CTG-G------TCTG-T-G----TCA---------TA-----------------G-----------TC-AGATGAGAGAA--T
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 I 39
s Tupaia_chinensis.KB320699.1                              2151006 66 +   4065304 agcaaag-cta-tgt------------ggaaccacag-aag---------------------catagata----gg-----ctg-g------cttg-T-G----CCA---------TA-----------------G-----------tc-agatgagagaa--t
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     4304 66 -     10553 AGCAAAG-CTA-TGT------------GGACCCACAG-AAG---------------------CATGGATA----GG-----CTG-G------TTTG-T-G----CCA---------CA-----------------G-----------TC-AGATGAGAGAA--T
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15738372 66 +  33153633 AACAAAG-ATC-AGT------------GGGCACACAG-AAG---------------------CCTAGAGA----GG-----CTG-G------TCTG-T-G----CCA---------CA-----------------G-----------TC-AGATGAGAGAA--T
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 1
s Uropsilus_gracilis.UroGra_scaffold_12083                   52185 33 -     77625 AACAAAG-TTT-TAC------------AGACTCACAG-AAA---------------------TGTGGAG-----------------------------------------------------------------------------------------------
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 25
s Ursus_maritimus.KK499267.1                               4847569 66 -   5085361 AACAAAG-ATC-TAT------------AGGCACACAG-AAG---------------------CCTAGAGA----GT-----CTC-A------TCTG-T-G----CTA---------TA-----------------G-----------TC-ACATGAGAGAA--T
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   7656 62 +     50397 AACAAAG-ATC-TAC------------GAGCACACAG-AAG---------------------TCTGGAAA----GG-----TCT-G------T------G----CCG---------TG-----------------G-----------TC-AGATGAGAGAA--T
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              7710 62 +     24756 AACAAAG-ATC-TAT------------GAGCACACAG-AAG---------------------TCTGGAAA----GG-----TCT-G------T------G----CCA---------TG-----------------G-----------TC-AGATGAGAGAA--T
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5369020 66 -   5488506 gacacag-atc-tgt------------gggcacacag-aag---------------------cctagaga----ga-----ctg-g------tctg-g-g----cca---------ca-----------------g-----------tc-aggtgaggaaa--C
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  8020 65 -     43706 AACAAAG-ATC-TGT------------GGGTACACAG-AAG---------------------CCTAGAGA----GG-----CTG-A------TCT--T-G----CCA---------TA-----------------G-----------TC-ACATGAGGGAA--G
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        20324 54 -     24430 AACAGGG-GTC-TAT------------GAGCC--CAG-AAG---------------------CCTGGGAA----AA-----G-G-GGGCTGATC-AGT-G----TCA---------CC----------------------------------------------
i Xerus_inauris.XerIna_scaffold_48378                    C 0 I 11
s Zalophus_californianus.ZalCal_flattened_line_17732          2277 66 +     86975 AACCAAG-ATC-TAT------------GGGTACACAG-AAG---------------------CCTAGAGA----GA-----ATG-A------TCTG-T-G----CCG---------TA-----------------G-----------TC-AGATGAAAGAA--T
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      11286 36 +     63895 GACAATA-ACC-TAT------------GAGCACACAG-AAA---------------------CATGGAGA----GG----------------------------------------------------------------------------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 29
s Ziphius_cavirostris.ZipCav_flattened_line_71469            12064 66 +     12536 AACAAAG-ATC-TGT------------GGGCACACAG-AAG---------------------CCTAGAGA----GG-----CTG-G------TCTG-T-G----CCA---------CA-----------------G-----------TC-AGATGAGAGAA--T
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 I 1
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1359220  0 +   3988456 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       2297 43 +     62944 A-T--ATGTGCCA--G-----CCCTTT------CT--A--AA--TG-TTAC-C-A---------------GTG-CTG-TGCTTG------A
s Acinonyx_jubatus.LLWD01001279.1                           824449 43 -   1699592 A-T--AAGTTCAa--g-----tcat------ttat--a--aa--t-tttat-c-a---------------atG-CTG-TGCATA------T
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     66720 21 +     87051 G-G--ATATTA-A--AG----T-CTTT------AT--G--TA-------------------------------------------------
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 29 I 239
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507719 29 -  29979442 A-C--ACATGCAa--g-----tcat------ttat--a--aa--t-tttgt-t--------------------------------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             76502 29 -    347723 A-C--ACATGCAA--G-----TCAT--T-T---AT--A--AA--C-TTTAT-C--------------------------------------
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     65982 43 -     89534 A-T--CTGTGAAA--A-----TCTTTT------AC--A--AT--AC-TTAC-C-A---------------GGG-CCA-TGCCTG------A
i Allactaga_bullata.AllBul_scaffold_9566                 I 24 C 0
s Allenopithecus_nigroviridis.k141_3361533                   10276 43 -     52922 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         10207 43 -     28001 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                           653 43 -     18505 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           1502 43 -     12518 C-T--ATGCGCCA--G-----CCCCTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          676047 38 -   2318259 -------GTGCTA--G-----TTAT--------TCACA--GA-TT--TTAC-C-A---------------GTG-CTC-TGTGCA-------
i Ammotragus_lervia.NIVO01071767.1                       I 1 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             98530 38 -    100397 -------GTGCTA--G-----TCAT--------CCATA--AA-TT--TTAC-C-A---------------GTG-CTA-TGAGTA-------
i Antilocapra_americana.AntAmePen_scaffold_12469         I 1 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7919 43 +     20879 G-T--ATGTCCAA--A-----TCCTTT------AT--A--AA--AG-TTAC-T-A---------------GTG-CCA-TCCTTG------A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        15575 43 +     17124 a-t--atgtgcaa--g-----tccttc------at--a--aa--tg-ttGC-C-A---------------GTA-CTT-TGTTGC------A
i Arctocebus_calabarensis.k141_288239                    I 478 C 0
s Avahi_laniger.k141_765380                                  49973 22 -     92717 -----------------------------------------A--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------G
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              50602 22 +     85213 -----------------------------------------A--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------G
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15192295 38 +  23207421 -------GTGCTG--G-----TCCT--T----CAC--A--AA-TT--TTGC-C-A---------------GTG-CTA-TGCATA-------
i Balaenoptera_acutorostrata.KI537508.1                  I 1 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2760 38 -     18090 -------GTGCTG--G-----TCCT--T----CAC--A--AA-TT--TTAC-C-A---------------GTG-CTA-TGCATA-------
i Balaenoptera_bonaerensis.DF707048.1                    I 1 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    26971 38 +     34529 -------GTGCTA--G-----TCAT--------TCACA--GA-TT--TTAC-C-A---------------GTG-CTA-TGTGTA-------
i Beatragus_hunteri.BeaHun_scaffold_50177                I 1 C 0
s Bison_bison.KN261452.1                                    200028 36 -    288883 -------GTGTTA--G-----TCAT--------TCACA--AA-TT--TTAC-C-A---------------GTG-CTA-T--GTA-------
i Bison_bison.KN261452.1                                 I 1 C 0
s Bos_indicus.CM003047.1                                  20273233 36 +  48749331 -------GTGTTA--G-----TCAT--------TCACA--AA-TT--TTAC-C-A---------------GTG-CTA-T--GTA-------
i Bos_indicus.CM003047.1                                 I 1 C 0
s Bos_mutus.JH880303.1                                     1125789 36 -   1948126 -------GTGTTA--G-----TCAT--------TCACA--AA-TT--TTAC-C-A---------------GTG-CTA-T--GTA-------
i Bos_mutus.JH880303.1                                   I 1 C 0
s Bos_taurus.CM000203.6                                   18083871 36 +  45695690 -------GTGTTA--G-----TCAT--------TCACA--AA-TT--TTAC-C-A---------------GTG-CTA-T--GTA-------
i Bos_taurus.CM000203.6                                  I 1 C 0
s Bubalus_bubalis.KI419123.1                               2819538 38 +   4408762 -------GTGTTA--G-----TCAT--------TCACA--GA-TT--TCAC-C-A---------------GTG-CTA-TGTGTA-------
i Bubalus_bubalis.KI419123.1                             I 1 C 0
s Camelus_bactrianus.KN276810.1                            9999596 42 -  17673402 A-C--GCGTGCTA--G-----TCCT--------TTACA--AG-TT--TTAC-C-A---------------GTG-CTA-TGTGTA-------
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2332060 42 -   7040546 A-C--GCGTGCTA--G-----TCCT--------TTACA--AG-TT--TTAC-C-A---------------GTG-CTA-TGTGTA-------
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  400336 42 -   1652518 A-C--GCGTGCTA--G-----TCCT--------TTACA--AG-TT--TTAC-C-A---------------GTG-CTA-TGTGTA-------
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17796462 29 -  60362399 A-C--ACATGCAA--G-----TCAT--T-T---AT--A--AA--T-TTTAT-C--------------------------------------
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182519 29 -    185531 A-C--ACATGCAA--G-----TCAT--T-T---AT--A--AA--T-TTTAT-C--------------------------------------
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031905 29 -   9314153 A-C--ACATGCAa--g-----tcat------ttat--a--aa--t-tttat-c--------------------------------------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17956170 29 -  59632846 A-C--ACATGCAa--g-----tcat------ttat--a--aa--t-tttat-c--------------------------------------
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18497470 29 +  63665305 A-C--ACATGCaa--g-----taat------ttat--a--aa--t-tttat-c--------------------------------------
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18830165 38 +  46296322 -------GTGCTA--G-----TTAT--------TCACA--GA-TT--TTAC-C-A---------------GTG-CTC-TGTGCA-------
i Capra_aegagrus.CM003241.1                              I 1 C 0
s Capra_hircus.CM004588.1                                 18060885 38 -  44709034 -------GTGCTA--G-----TTAT--------TCACA--GA-TT--TTAC-C-A---------------GTG-CTC-TGTGCA-------
i Capra_hircus.CM004588.1                                I 1 C 0
s Carlito_syrichta.NW_007259797.1                           141699 43 -    496798 G-C--TTGGACAA--G-----TCCTGT------AT--A--AA--TC-CTAC-C-A---------------GTG-CTA-TGCATG------A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    134468 42 +    179628 A-G--CCCTGAAA--A-----TCCTTT------AT--A--AA--TT-TGAG-T-A---------------ATG-CTA-TGCTTC-------
i Castor_canadensis.CasCan_scaffold_2074                 I 28 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89947 49 +    217609 A-C--ATGGGCTA--G-----TCCT--T-T---AC--A--AA--T-GTTAC-C-C---------------ATG-CTG-CACATATTTATGT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         5614 43 -      8605 G-C--TTGGACAA--G-----TCCTGT------AT--A--AA--TC-CTAC-C-A---------------GTG-CTA-TGCATG------A
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12228563 43 +  27778364 g-c--atgggcaa--g-----tcct------tgat--a--aa--t-tttaa-c-a---------------gtg-ctg-tGGATA------A
i Ceratotherium_simum.JH767749.1                         I 22 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          3281 43 -      3715 G-C--ATGGGCAA--G-----TCCT--TG----AT--A--AA--T-TTTAA-C-A---------------GTG-CTG-TGGATA------A
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     I 22 C 0
s Cercocebus_atys.KQ010504.1                               4471235 43 +   4669795 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCATG------A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         9784 43 -     19203 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCATG------A
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           4205 43 +      8260 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCATG------A
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           4433 43 +     27781 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCATG------A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         4592 43 -     20310 C-T--ATGTGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           7576 43 +     29689 C-T--ATGTGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            2012 43 +      9989 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          10259 43 -     27936 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-TTG-TGCTTG------A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                            10286 43 -     11289 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38812658 43 +  39242232 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21218357 43 -  21565898 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       35476 43 -     53127 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        2761 43 +      7159 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       10279 43 -     27947 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         10255 43 +     17596 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         40756 43 -     41420 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            5512 44 -      6351 G-C--ACGTGCAA--G-----CCCT--T-T--CAT--G--GA--T--GTCA-CTG---------------CTG-CAA-CAAGTA------A
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             17394 22 -     52598 -----------------------------------------A--TG-TTGC-C-A---------------GTC-CTT-TGCTCG------A
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12744 22 +     57038 -----------------------------------------A--TG-TTGC-T-A---------------GTC-CTT-TGCTCG------A
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chlorocebus_aethiops.ctg25                              18424217 43 -  18827391 C-T--ATGCGCCA--G-----CCCTTC------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       10659 43 -     50209 C-T--ATGCGCCA--G-----CCCTTC------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135417663 43 + 135778131 C-T--ATGCGCCA--G-----CCCTTC------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15805 43 +     19366 G-C--ATGTGCAA--G-----TCCT---AT---AT--G--AA--T--TTCA-CAG---------------GTG-CAA-TGAGCA------A
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170904 43 +    839153 G-C--ATGTGCAA--G-----TCCT---AT---AT--G--AA--T--TTCA-CAG---------------GTG-CAA-TGAGCA------A
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1906174 43 +   2368649 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199945843 43 + 200372422 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              32715 43 +     84244 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17546990 23 -  53390261 -------------------------------------A--AT--G--TTAT-C-A---------------GT--TCTATGCCTA------A
i Condylura_cristata.JH655891.1                          I 25 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          11208 41 -     20389 A-C--ATATGCAA--A-----TTCT--------TG--AGCAA--T-GTCAC-C-A---------------GAG-ATA-TGCA--------T
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 34 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 46953 58 +     63868 g-t--gtgtgtgt--g-----t-ctgt------gt--a--tg--tg-tgtc-t-atgtgtctgtgtgtctgtgtctg-tgtgtg------c
i Cricetomys_gambianus.CriGam_scaffold_18520             I 30 I 110
s Cricetulus_griseus.LT883664.1                           11663952 43 + 224834208 A-T--ATGTATAA--A-----T-CTTC------AT--A--AA--TG-TTAC-T-G--------------AGGG-CTA-TGCTTA------A
i Cricetulus_griseus.LT883664.1                          I 29 C 0
s Crocidura_indochinensis.CroInd_scaffold_287352              1172 18 +      4208 TAA--CTATGCAA--G-----TCCT--------AC--------------------------------------------------------
i Crocidura_indochinensis.CroInd_scaffold_287352         I 65 I 15
s Cryptoprocta_ferox.CryFer_flattened_line_16129             25623 39 -     87169 A-C--AA----AG--G-----TCAT--T-T---AT--A--AA--T-TTTAT-C-A---------------ATG-CTA-CACATA------C
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            61782 44 +   2246927 G-C--ATGTATGA--G-----TCCT--T-TT--AT--G--AA--T--GTCA-CTG---------------GAG-CTA-TGAGTA------A
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12533555 43 -  12879189 A-T--ATGCGCAA--G-----TCCTTT------AT--A--AA--GG-TGGC-C-A---------------GAG-CTG-TGCTTG------C
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811931 38 +  35494412 -------CTGCTA--G-----TCCT--T----CAC--A--AA-TT--TAAC-C-A---------------GTG-TTA-TGCATA-------
i Delphinapterus_leucas.KZ290073.1                       I 1 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  670416 43 +   1390856 G-C--ATGGGCAA--G-----TCCT--TG----AC--A--AA--T-TTTAA-C-A---------------GTG-CTA-TGGATA------A
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 22 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    3171 43 +    198055 G-C--ATGGGCAA--G-----TCCT--TG----AT--A--AA--T-TTTAA-C-A---------------GTG-CTG-TGGATA------A
i Diceros_bicornis.DicBicMic_scaffold_5955               I 22 C 0
s Eidolon_helvum.KE759718.1                                   8121 43 +     11740 a-c--atgtgtaa--g-----ccct--------tt--ataaa--t-gtcac-a-a---------------gtg-cta-tacata------t
i Eidolon_helvum.KE759718.1                              I 31 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       311202 38 +    607251 -------GTGCTA--A-----TCAT--------TCCCA--AA-TT--TTAC-C-A---------------GTG-CTA-TGTGTA-------
i Elaphurus_davidianus.JRFZ01104969.1                    I 1 C 0
s Ellobius_lutescens.LOEQ01008920.1                          12756 37 -    110024 -----------aaata-----t-atat------at--a--ta--ta-ttac-c-a--------------aggg-tca-tgcttg------a
i Ellobius_lutescens.LOEQ01008920.1                      I 28 C 0
s Ellobius_talpinus.LOJH01123422.1                            3728 28 +      5358 --------------------------t------at--a--aa--ta-tTAC-C-A--------------AGGG-TCA-TGCTTG------A
i Ellobius_talpinus.LOJH01123422.1                       I 50 C 0
s Enhydra_lutris.KZ291758.1                               16326482 29 -  41312741 A-C--ACATGCAa--g-----tcat------tttt--a--aa--c-tttat-c--------------------------------------
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1280456 43 +   4378816 A-C--AAGTGCAA--G-----TCCT--TG----AT--G--AG--T-TTTAA-T-G---------------GTG-CCA-TGTATA------A
i Equus_asinus.JREZ01000139.1                            I 22 C 0
s Equus_caballus.CM000403.2                               18528277 43 -  39960074 A-C--AAGTGCAA--G-----TCCT--TG----AT--A--AG--T-TTTAA-T-G---------------GTG-CCA-TGCATA------A
i Equus_caballus.CM000403.2                              I 22 C 0
s Equus_przewalskii.KK951119.1                               30292 43 +    498745 A-C--AAGTGCAA--G-----TCCT--TG----AT--A--AG--T-TTTAA-T-G---------------GTG-CCA-TGCATA------A
i Equus_przewalskii.KK951119.1                           I 22 C 0
s Erinaceus_europaeus.JH835339.1                           3326757 33 -   7059049 C-T--ATGTGCAA--A-----TCCT---G---AAT--G--AA--T--TTACTC-A---------------ATG------------------
i Erinaceus_europaeus.JH835339.1                         I 22 I 627
s Erythrocebus_patas.Contig38                             21200849 43 -  21539334 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11607 38 +    133382 -------GTGCTG--G-----TCCT--T----CAC--A--AA-TT--TTAC-C-A---------------GTG-CTA-TGCATA-------
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 1 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             25544 38 -     44125 -------GTGCTG--G-----TCCT--T----CAT--A--AA-TT--TTAC-C-G---------------GTG-CTA-TGCATA-------
i Eubalaena_japonica.EubJap_flattened_line_31514         I 1 C 0
s Eulemur_albifrons.k141_342033                              10075 22 -     14127 -----------------------------------------G--TG-TTCC-C-A---------------GTG-CTG-TGCTTG------G
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                2773 22 -     16928 -----------------------------------------G--TG-TTCC-C-A---------------GTG-CTG-TGCTTG------G
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              11806 22 -     25546 -----------------------------------------G--TG-TTCC-C-A---------------GTG-CTG-TGCTTG------G
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             8991 22 +     26330 -----------------------------------------G--TG-TTCC-C-A---------------GTG-CTG-TGCTTG------G
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 10248 22 +     23973 -----------------------------------------G--TG-TTCC-C-A---------------GTG-CTG-TGCTTG------G
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 8991 22 +     75513 -----------------------------------------G--TG-TTCC-C-A---------------GTG-CTG-TGCTTG------G
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  6943 22 +     97555 -----------------------------------------G--TG-TTCC-C-A---------------GTG-CTG-TGCTTG------G
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                             9869 22 +     26496 -----------------------------------------G--TG-TTCC-C-A---------------GTG-CTG-TGCTTG------G
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                   475 22 -     17153 -----------------------------------------G--TG-TTCC-C-A---------------GTG-CTG-TGCTTG------G
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              10054 22 +    111500 -----------------------------------------G--TG-TTCC-C-A---------------GTG-CTG-TGCTTG------G
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20234314 43 + 206538554 A-T--AAGTTCAa--g-----acat------ttac--a--at--t-tttat-c-a---------------ATG-CTG-TGCATA------C
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20193159 43 + 205367284 A-T--AAGTTCAA--G-----GCAT--T-T---AC--A--AC--T-TTTAT-C-A---------------ATG-CTG-TGCATA------C
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  6671 43 -     36744 A-T--AAGTTCAA--G-----TCAT--T-T---AT--A--AT--T-TTTAT-C-A---------------ATG-CTG-TGCATA------C
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_266699                266 43 +      2098 A-T--ATGTTCGA--G-----TCATTT------AT--A--AA--TT-TTAA-C-A---------------ATG-CTG-TGCTTA------A
i Galeopterus_variegatus.GalVar_scaffold_266699          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     609167 38 -    660261 -------AAGCCA--G-----TCGT--------TCACA--GA-TT--TCAC-C-A---------------GTG-CTA-TGTGTA-------
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 1 C 0
s Glis_glis.GliGli_scaffold_19807                            30981 43 +     49224 A-T--ATGTGCAG--A-----TCCTTT------AT--A--AA--TT-TGAC-C-A---------------GTG-TGA-TGCTTG------A
i Glis_glis.GliGli_scaffold_19807                        I 19 C 0
s Gorilla_beringei.k141_2022027                               2952 43 +      3305 A-T--ATGTGCCA--G-----CCCTTT------CT--A--AA--TG-TTAC-C-A---------------GTG-CTG-TGCTTG------A
i Gorilla_beringei.k141_2022027                          C 0 n 0
s Gorilla_gorilla.CYUI03001814.1                             28043 43 -     31004 A-T--ATGTGCCA--G-----CCCTTT------CT--A--AA--TG-TTAC-C-A---------------GTG-CTG-TGCTTG------A
i Gorilla_gorilla.CYUI03001814.1                         I 99 I 780
s Graphiurus_murinus.GraMur_scaffold_10447                   30701 43 +     78134 A-T--ATGTACAA--A-----TCCTTT------AT--A--AA--TT-TGAC-T-A---------------GTG-TGA-TCCTTG------A
i Graphiurus_murinus.GraMur_scaffold_10447               I 19 C 0
s Hapalemur_alaotrensis.k141_170648                           3139 22 -     19426 -----------------------------------------G--TG-TTGC-C-A---------------GTG-CTG-TGGTTG------G
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              8283 22 -     15286 -----------------------------------------G--TG-TTGC-C-A---------------GTG-CTG-TGGTTG------G
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                              9921 22 +     18253 -----------------------------------------G--TG-TTGC-C-A---------------GTG-CTG-TGGTTG------G
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         10024 22 -     41752 -----------------------------------------G--TG-TTGC-C-A---------------GTG-CTG-TGGTTG------G
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                          9857 22 -     16460 -----------------------------------------G--TG-TTGC-C-A---------------GTG-CTG-TGGTTG------G
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               239445 43 +    327341 A-C--AAGTGCAA--G-----TCAT--T-T---AT--A--CA--T-TTTAT-C-A---------------ATG-CTG-TGCATA------C
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18371 38 +     36099 -------GTGCTA--G-----TCAT--------TCACA--GA-TT--TTAC-C-A---------------GTG-CTC-TGTGTA-------
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 1 C 0
s Hipposideros_armiger.JXIK01000431.1                       108982 43 +   1711038 a-c--atatgcaa--g-----ttcc--------tt--ataaa--t-gtcgc-c-a---------------gtg-cta-tgcata------t
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               40418 43 +     43066 a-c--atatgcaa--g-----ttcc--------tt--ataaa--t-gtcgc-c-a---------------gtg-cta-cgcata------t
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    430424 43 +    630532 A-T--ATGTGCCA--G-----CCCTTT------CT--A--AA--TG-TTAC-C-A---------------GTG-CTA-TGCTTG------A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  41603 43 +     55795 A-C--AAGTTCAA--A-----TCAT--T-T---CT--A--AA--T-TTTAT-C-A---------------ATG-CTA-TGCATA------C
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_307679                               13355 43 -     15490 A-T--ATGTACCA--G-----CCCTTT------CT--A--AA--TG-TTAC-C-A---------------GTG-CTA-TGCTTG------A
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              55361 43 +     67168 A-T--ATGTACCA--G-----CCCTTT------CT--A--AA--TG-TTAC-C-A---------------GTG-CTA-TGCTTG------A
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189539011 43 - 191637585 A-T--ATGTACCA--G-----CCCTTT------CT--A--AA--TG-TTAC-C-A---------------GTG-CTA-TGCTTG------A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3331904 43 -  11177569 A-T--ATGTACCA--G-----CCCTTT------CT--A--AA--TG-TTAC-C-A---------------GTG-CTA-TGCTTG------A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7515244 43 -   7955117 A-C--ATGTGCAA--A-----TTCTTT------AT--A--AA--AG-TTAC-C-A---------------GTG-TCA-TGCTTG------A
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   18840 22 +     31101 -----------------------------------------A--TG-TTGC-C-A---------------GTG-CTG-TGCTCG------G
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               23148 38 +     23964 -------CTGCTA--G-----TCCT--T----CAC--A--AA-TT--TTAC-C-A---------------GTG-TTA-TGCATA-------
i Inia_geoffrensis.IniGeo_flattened_line_48101           I 1 C 0
s Jaculus_jaculus.JH725527.1                               8272349 43 -   9596543 A-T--CTGTGAAA--A-----TCTTTT------AC--A--AT--AC-TTAC-C-A---------------GGG-CCA-TGCTTG------A
i Jaculus_jaculus.JH725527.1                             I 29 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                2512 31 -      3359 ---------------------TTCT--T----CAC--A--AA-TG--TTAC-C-A---------------GTG-TTA-TGCATA-------
i Kogia_breviceps.KogBre_flattened_line_192630           I 7 C 0
s Lemur_catta.scaffold_24                                 15520384 22 -  30322482 -----------------------------------------G--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------G
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          7295 22 -     23766 -----------------------------------------A--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------G
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             25242 22 +     45836 -----------------------------------------A--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------G
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         32154 22 -     32627 -----------------------------------------A--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------G
i Lepilemur_ruficaudatus.k141_420445                     I 62 C 0
s Lepilemur_septentrionalis.k141_185316                      23297 22 +     54090 -----------------------------------------A--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------G
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3039631 29 +   3914936 G-C--ACATGCaa--g-----tcat------ttat--a--aa--t-tttat-c--------------------------------------
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             268200 38 -    662738 -------CTGCTA--G-----TCCT--T----CAC--A--AA-TT--TTAC-C-A---------------GTG-TTA-TGCATA-------
i Lipotes_vexillifer.KE559953.1                          I 1 C 0
s Lophocebus_aterrimus.ctg367                              1432780 43 +   1826925 C-T--ATGCGCCA--G-----CCCTTT------CG--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCATG------A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            1806 43 +     11245 a-t--atgtgcaa--g-----tccttt------at--a--aa--tg-ttGC-C-A---------------GTG-CTT-TGTTGC------A
i Loris_lydekkerianus.k141_2539221                       I 469 C 0
s Loris_tardigradus.ctg83                                  1000643 43 +   6120653 a-t--atgtgcaa--g-----tccttt------at--a--aa--tg-ttGC-C-A---------------GTG-CTT-TGTTGC------A
i Loris_tardigradus.ctg83                                I 469 C 0
s Lycaon_pictus.CM007581.1                                17952410 29 -  59628241 A-C--ACATGCAa--g-----tcat------ttat--a--aa--t-tttat-c--------------------------------------
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               2601 43 +     40492 C-T--ATGCGCCA--G-----CCCTTT------CG--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCGTG------A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59671856 43 +  60120075 C-T--ATGCGCCA--G-----CCCTTT------CG--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  8356 43 -     26193 C-T--ATGCGCCA--G-----CCCTTT------CG--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            76153 43 -    114318 C-T--ATGCGCCA--G-----CCCTTT------CG--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  1868 43 -     23192 C-T--ATGCGCCA--G-----CCCTTT------CG--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                11321 43 -     29190 C-T--ATGCGCCA--G-----CCCTTT------CG--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  19888 43 +     37952 C-T--ATGCGCCA--G-----CCCTTT------CG--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186834976 43 + 187317192 C-T--ATGCGCCA--G-----CCCTTT------CG--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25453539 43 -  25927173 C-T--ATGCGCCA--G-----CCCTTT------CG--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  75737 43 +     89720 C-T--ATGTGCCA--G-----CCCTTT------CG--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 2735 43 +     20474 C-T--ATGCGCCA--G-----CCCTTT------CG--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   2536 43 -     14993 C-T--ATGCGCCA--G-----CCCTTT------CG--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  325408 43 -    668171 C-T--ATGCGCCA--G-----CCCTTT------CG--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                  839 43 -     24072 C-T--ATGCGCCA--G-----CCCTTT------CG--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               21475 43 -     45290 C-T--ATGCGCCA--G-----CCCTTT------CG--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88210 43 +     94391 a-c--atgtgtaa--g-----gcct--------tt--ataaa--t-gtcac-a-a---------------gag-cta-tacata------t
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 31 C 0
s Mandrillus_leucophaeus.scaffold280                      23933023 43 -  24302211 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCATG------A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               347200 43 +    752769 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCATG------A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              16288 42 +    737560 A-C--ATACGT-A--G-----TCCT--T-T---AT--A--AA--T-GTTAC-C-A---------------GTG-CTA-TGCATA------C
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              47673 42 -    317179 a-c--atgtgt-a--g-----tcct------ttat--a--aa--t-attac-c-a---------------gtg-cta-tgcaca------c
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33098093 43 -  40650429 A-C--ATGTGCAA--A-----TTCTTT------AT--A--AA--AG-TTAC-C-A---------------GTG-TCA-TGCTTG------A
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         7496 42 -    207569 A-C--ATAAGCAA--G-----TTCT--------TC--ATAAA--T-GTCAC-C-A---------------GTG-CCA-TGCA-A------T
i Megaderma_lyra.MegLyr_scaffold_4542                    I 34 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              7190 29 +     13704 A-C--ACATGCAA--G-----TCAT--T-T---AT--A--AA--C-TTTAT-C--------------------------------------
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 28239 24 +    140813 --------CT-AA--CG----T-CTTT------GT--T--AA--TG-TTAC-T-A------------------------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             I 30 I 354
s Mesocricetus_auratus.KB708134.1                         12178345 43 -  29670104 A-T--ATGTATAA--A-----T-CTTC------AT--A--AA--TG-TTAC-T-G--------------AAGG-CTA-TGCCTG------A
i Mesocricetus_auratus.KB708134.1                        I 29 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3816 38 +     10310 -------GTGCTA--G-----TCCC--T----CAC--A--AA-TT--TTAC-C-A---------------GTG-TTA-TGCGTA-------
i Mesoplodon_bidens.MesBid_scaffold_108144               I 1 C 0
s Microcebus_murinus.CM007674.1                           18287779 22 -  93316391 -----------------------------------------A--TG-TTGC-C-A---------------TTG-TTG-TGTTTG------G
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_534055                           4774 43 -     28506 C-T--ACGCGCCA--G-----TCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         2467 29 -      8324 G-C--ACATGCAA--G-----TCAT--T-T---AT--A--AA--T-TTTAT-C--------------------------------------
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      5347 22 -     37649 -----------------------------------------A--TG-TTGC-C-A---------------TTG-CTG-TGTTTG------G
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    27321 38 -    437263 -------CTGCTA--G-----TCCT--T----CAC--A--AA-TT--TTAC-C-A---------------GTG-TTA-TGCATA-------
i Monodon_monoceros.MonMon_M_scaffold_103                I 1 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138519 43 -    366855 A-C--ACATGCAA--G-----TCCT--------TT--ATAAA--C-ACCAC-C-A---------------GCG-CTA-TGTGTG------A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   1251 38 +     82753 -------GTGCTA--G-----TCAT--------TCACA--GA-TT--TTAC-C-A---------------GTG-CTA-TGTGTA-------
i Moschus_moschiferus.MosMos_scaffold_13123              I 1 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   32548 43 +     37127 A-C--AAGTGCAA--G-----TCAT--T-T---AC--A--CA--T-TTTAT-C-A---------------ATG-CTG-TGCACA------C
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Mus_caroli.LT608237.1                                   84357306 30 - 120012414 A-T--ATGTAAAA--AGTCTTT-----------AT--A--AA--TG-TTAC-T-A------------------------------------
i Mus_caroli.LT608237.1                                  I 28 I 358
s Mus_musculus.chr8                                       87646279 30 - 129401213 A-T--ATGTAAAA--AATCTTT-----------AT--A--AA--TG-TTAC-T-A------------------------------------
i Mus_musculus.chr8                                      I 28 I 357
s Mus_spretus.CM004101.1                                  90748353 30 - 130317789 A-T--ATGTAAAA--AGTCTTT-----------AT--A--AA--TG-TTAC-T-A------------------------------------
i Mus_spretus.CM004101.1                                 I 28 I 358
s Muscardinus_avellanarius.MusAve_scaffold_82313              3001 43 +     14296 A-T--ATGTGTGA--A-----TTCTTT------AT--A--AA--TT-TGAC-C-A---------------GTA-TGA-TGCTTG------C
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 18 C 0
s Mustela_putorius.JH418006.1                               298380 29 -  14710649 A-C--ACATGCAA--G-----TCAT--T-T---AT--A--AA--C-TTTAT-C--------------------------------------
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186733 33 +    196477 ---------------A-----TCAT---CT---AT--G--AA--T--TTCA-CCA---------------TTG-CAA-TGAGTG------A
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.AXCS01343547.1                            262 43 +       996 A-T--CCatgaaa--a-----tacttt------at--a--aa--at-ttaC-T-A---------------ATG-CCG-TGCTTG------A
i Nannospalax_galili.AXCS01343547.1                      I 29 C 0
s Nasalis_larvatus.k141_413338                               10774 43 +     21681 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5866277 38 +   7148211 -------CTGCTA--G-----TCCT--T----CAC--A--AA-TT--TTAC-C-A---------------GTG-TTA-TGCATA-------
i Neophocaena_asiaeorientalis.KZ687982.1                 I 1 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    757053 43 +    783361 A-C--ATACCCAA--G-----GGCT--------AT--ATAAA--C-ATCGC-C-A---------------GTG-CTG-TGCGTG------A
i Noctilio_leporinus.NocLep_scaffold_251                 I 22 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146671 29 -   9404916 A-C--ACATGCAa--g-----tcat------ttat--a--aa--t-tttat-c--------------------------------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102575626 43 - 196305487 a-t--atgggcaa--g-----tccttt------at--A--AA--TG-TTGC-C-A---------------GTG-CTT-TGTTGC------A
i Nycticebus_bengalensis.LG01                            I 469 C 0
s Nycticebus_coucang.k141_5327727                             3312 43 +      8486 a-t--atgggcaa--g-----tccttt------at--A--AA--TG-TTGC-C-A---------------GTG-CTT-TGTTGC------A
i Nycticebus_coucang.k141_5327727                        I 469 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105746053 43 + 199412804 a-t--atgtgcaa--g-----tccttt------at--a--aa--tg-ttgC-C-A---------------GTG-CTT-TGTTGC------A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 469 C 0
s Odobenus_rosmarus.KB229312.1                              503773 29 -   2017862 A-C--ACATGCAa--g-----tcat------ttat--a--aa--t-tttat-c--------------------------------------
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          77084 38 -    150152 -------GAGCCA--G-----TCAT--------TCACA--AA-TT--TTAC-C-A---------------GTG-CTA-TGTGTA-------
i Okapia_johnstoni.LVCL01S0005463.1                      I 1 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   17011  4 +     28053 A-T--AT------------------------------------------------------------------------------------
i Ondatra_zibethicus.OndZib_scaffold_46174               I 29 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    75113 43 +    102263 A-T--ATGTAAAA--G-----T-CTTC------AT--A--AA--TG-TTAC-T-A--------------AGGG-CTA-TGCTTG------A
i Onychomys_torridus.OnyTor_scaffold_2986                I 29 C 0
s Orcinus_orca.KB316932.1                                  2782200 38 -  10937097 -------CTGCTA--G-----TCCT--T----CAC--A--AA-TT--TTAC-C-A---------------GTG-TTA-TGCATA-------
i Orcinus_orca.KB316932.1                                I 1 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       459425 29 -    559221 A-C--ACATGCAa--g-----tcat------ttat--a--aa--t-tttat-c--------------------------------------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17586346 38 +  44047080 -------GTGCTA--G-----TCAT--------TCACA--GA-TT--TTAC-C-A---------------GTG-CTC-TGTGTA-------
i Ovis_aries.CM001607.2                                  I 1 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      174323 38 -    191736 -------GTGCTA--G-----TCAT--------TCACA--GA-TT--TTAC-C-A---------------GTG-CTC-TGTGTA-------
i Ovis_canadensis.OviCan_scaffold_2572                   I 1 C 0
s Pan_paniscus.KQ411613.1                                    39649 43 +     80009 A-T--ATGTGCCA--G-----CCCTTT------CT--A--AA--TG-TTAC-C-A---------------GTG-CTG-TGCTTG------A
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189138542 43 + 189151597 A-T--ATGTGCCA--G-----CCCTTT------CT--A--AA--TG-TTAC-C-A---------------GTG-CTG-TGCTTG------A
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  148320 43 +    230217 G-T--AAGTTCAA--G-----TCAT--T-T---AT--A--AA--T-TTTAT-C-A---------------ATG-CTG-TGCATA------C
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                261527 43 +  18783137 G-T--AAGTTCAa--g-----tcat------ttat--a--aa--t-tttat-c-a---------------atG-CTG-TGCATA------C
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4718164 43 -   8748460 G-T--AAGTTCAa--g-----tcat------ttat--a--aa--t-tttat-c-a---------------atG-CTG-TGCATA------C
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1265240 38 -   2937107 -------GTGCTA--G-----TCAT--------TCACA--GA-TT--TTAC-C-A---------------GTG-CTA-TGTGTA-------
i Pantholops_hodgsonii.KE114653.1                        I 1 C 0
s Papio_anubis.CM001495.2                                183438809 43 + 183742232 C-T--ATGCGCCA--G-----TCCTTT------CG--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             2502 43 +     20448 C-T--ATGCGCCA--G-----TCCTTT------CG--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20559307 43 +  20919399 C-T--ATGCGCCA--G-----TCCTTT------CG--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   1245 43 +     41871 C-T--ATGCGCCA--G-----TCCTTT------CG--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     4531 43 +     27711 C-T--ATGCGCCA--G-----TCCTTT------CG--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  4616 40 +      9205 C-T--ATGCGCCA--G-----CCCTTT------CG--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCT---------
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9786 43 -     78924 A-C--AAATGCAA--G-----TGGT--T-T---AT--A--AA--T-TTTAT-C-A---------------ATG-CCG-TGCATA------C
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 1
s Perodicticus_ibeanus.k141_855320                            5808 43 +     13100 a-t--atgtgcaa--g-----tccttt------at--a--aa--tg-ttgC-C-A---------------GTA-CTT-TGTTGC------A
i Perodicticus_ibeanus.k141_855320                       I 477 C 0
s Perodicticus_potto.k141_1092580                             4181 43 +     25941 a-t--atgtgcaa--g-----tccttt------ac--a--aa--tg-ttGC-C-A---------------GTA-CTT-TGTTGC------A
i Perodicticus_potto.k141_1092580                        I 477 C 0
s Peromyscus_maniculatus.KI615324.1                       18187899 45 -  18517816 A-TATATGTGAAA--G-----T-CTTC------AT--A--AA--TG-TTAC-T-A--------------AGGG-CTA-TGCTTG------A
i Peromyscus_maniculatus.KI615324.1                      I 29 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               9239 38 +     63832 -------CTGCTA--G-----TCCT--T----CAC--A--AA-TT--TTAC-C-A---------------GTG-TTA-TGCATA-------
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 1 C 0
s Piliocolobus_badius.k141_1234363                           39286 43 +     62158 C-T--ATGCGCCA--G-----TCCTTT------CT--A--AA--TG-TTAC-C-A---------------GTG-CTG-TGCTTG------A
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        34008 43 +     89929 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTAC-C-A---------------GTG-CTG-TGCTTG------A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            35424 43 +     51399 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTAC-C-A---------------GTG-CTG-TGCTTG------A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14291660 43 -  14605196 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTAC-C-A---------------GTG-CTG-TGCTTG------A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34945 38 +     35617 -------GTGCTA--G-----TCCT--T----CAC--A--AA-TT--TTTC-C-A---------------GTG-TTA-TGCATA-------
i Platanista_gangetica.PlaMin_flattened_line_32310       I 1 C 0
s Pongo_abelii.CM009266.2                                189126734 43 + 189387572 A-T--ATGTGCCA--G-----CCCTTT------CT--A--AA--TG-TTAC-C-A---------------GTG-CTA-TGCTTG------A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9566340 43 +   9816681 A-T--ATGTGCCA--G-----CCCTTT------CT--A--AA--TG-TTAC-C-A---------------GTG-CTA-TGCTTG------A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68935 43 -     81375 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                               756 43 +     19060 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2593036 22 -   4620579 -----------------------------------------G--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------G
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     987049 22 +   2598838 -----------------------------------------A--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------G
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          25338 22 +     38485 -----------------------------------------A--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------G
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             1497 22 +      4256 -----------------------------------------A--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------G
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22857 22 +     35766 -----------------------------------------A--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------G
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           1040 22 -     24134 -----------------------------------------A--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------G
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24852 22 -     67325 -----------------------------------------A--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------G
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           1097 22 -      6182 -----------------------------------------A--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------G
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             5880 24 -     21651 --------CT-TA--AG----T-CTTT------AT--T--AA--TG-TTAC-T-A------------------------------------
i Psammomys_obesus.NESX01036370.1                        I 30 I 349
s Pteronotus_parnellii.KE909381.1                            11909 42 -     21811 A-C--ATACGCAA--A-----TCCT--------TT--ATAAA--C-ACCAC-C-A---------------GTG--TG-TGCGTG------A
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         37390 29 +     42204 A-C--ACATGCAA--G-----TCAT--T-T---AT--A--AA--C-TTTAT-C--------------------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22974392 42 +  28871421 a-c--atgtgtaa--g-----ccct--------tt--ataaa--t-gtcat-a-a---------------gtg-cta-tac-TA------T
i Pteropus_alecto.KB030862.1                             I 31 C 0
s Pteropus_vampyrus.KN525825.1                             1357481 43 +   4952924 a-c--atgtgtaa--g-----ccct--------tt--ataaa--t-gtcat-a-a---------------gtg-cta-tactta------t
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20271446 43 -  38429054 A-T--AAGTTCAA--G-----TCAC--T-T---AT--A--AA--T-TTTAT-C-A---------------ATG-CTG-TGCATA------T
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             10767 43 -     91421 C-T--GTGCACCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7604895 43 +   7812017 C-T--GTGCACCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10736 43 -     72585 C-T--GTGCACCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5823 38 +     55207 -------GTGCTA--G-----TCAT--------TTCCA--AA-TT--TTAC-C-A---------------GTG-CTA-TGTGTA-------
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 1 C 0
s Rattus_norvegicus.chr16                                 53566191 25 +  90668790 G-T--ATGTAAAA--A-----T-----------AT--A--AG--TG-TTAC-T-A------------------------------------
i Rattus_norvegicus.chr16                                I 28 I 434
s Rhinopithecus_bieti.k119_217274                             2451 43 -     11128 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCATG------A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91231806 43 - 195417433 C-T--ATGTGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCATG------A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7667455 43 +   7961872 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCATG------A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85392 43 -     96226 g-c--atgtgtaa--g-----ccct--------tg--ataga--t-gtcac-a-a---------------atg-cta-tacata------t
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 31 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    152046  9 -    313613 A-C--ACATGCA-------------------------------------------------------------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 16 I 9
s Semnopithecus_entellus.k141_11662                          15279 43 -     19888 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      22481 43 +     39453 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            3007 43 +     27826 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             2528 43 -     19483 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      2590 43 +      7198 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         10850 43 +     15514 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            188353 40 -    191337 G-C--ATGTGCGG--G-----TCCT--------AT--A--AA--T--TTAA-C-A---------------GTG-TCA-CGCATA------T
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13648545 32 -  18376816 A-A--CTATGAAA--G-----TCCT--------AT--G--GACGT--TTAC-C-A---------------GTG------------------
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1948876 43 -   3870691 A-C--ATGTGCAA--A-----TTCTTT------AT--A--AA--AG-TTAC-C-A---------------GTG-TCA-TGCTTG------A
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27906 29 +     97271 A-C--ACATGCAA--G-----TCAT--T-T---AT--A--AA--C-TGTAT-C--------------------------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              15454 43 -    196729 A-C--AAGTGCAA--G-----TCAT--T-T---AT--A--CA--T-TTTAT-C-A---------------ATG-CTG-TGCATA------C
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.JH118708.1                                      32430 49 -     47482 A-C--ATGGGCTA--G-----TCCT--T-T---AC--A--AA--T-GTTAC-C-C---------------ATG-CTA-TGCATATTTATGT
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1089055 43 -   1523678 A-T--ATGTACCA--G-----CCCTTT------CT--A--AA--TG-TTAC-C-A---------------GTG-CTA-TGCTTG------A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 7491 43 +     41958 a-c--atatgcaa--g-----tcct--------tt--ataaa--t-gtcac-c-a---------------gtg-ctg-tgcaTG------A
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 24 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 70087 33 +    116680 ---------------A-----TCAT---CT---AT--G--AA--T--TTCA-TCA---------------TTG-CAA-TGGGTA------A
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115898 42 -    156842 A-C--ACGTGCAA--G-----TTCT--TG-----T--A--AA--T-TTTTA-C-A---------------GTG-CTT-TGCATA------A
i Tapirus_indicus.TapInd_scaffold_9301                   I 22 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    384349 42 +    539355 A-C--ACATGCAA--G-----TTCT--TG-----T--A--TA--T-TTTTA-C-A---------------GTG-CTT-TGCATA------A
i Tapirus_terrestris.TapTer_scaffold_755                 I 22 C 0
s Tarsius_lariang.k141_2201908                               11312 43 +     70052 A-C--TTGGACAA--G-----TCCTGT------AT--A--AA--TC-CTAC-C-A---------------GTG-CTA-TGCATG------A
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               15617 43 +     25099 A-C--TTGGACAA--G-----TCCTGT------AT--A--AA--TC-CTAC-C-A---------------GTG-CTA-TGCATG------A
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186423853 43 + 186847797 C-T--ATGCGCCA--G-----CCCTTT------CG--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   2653 44 +      8208 G-C--ACGTCCAA--G-----TCCT--T---CCTT--G--AA--T--GTCA-CTG---------------CTG-CAA-TGAGTA------A
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Trachypithecus_auratus.k141_722599                          6581 43 -     20410 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    10777 43 +     15221 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        6682 43 +     19930 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       3112 43 -     19997 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            43231 43 -     60166 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        10704 43 -     27529 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     10644 43 -     18194 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           4379 43 -     21137 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    3082 43 -     10723 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         2234 43 +      9834 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        20552 43 +     32220 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5934649 43 +   6242583 C-T--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        3896 43 +     20839 C-C--ATGCGCCA--G-----CCCTTT------CT--A--AA--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_124071                   1920 38 -      2171 ---------------G-----TCCT--TGTTGTGCACA--AA-TT--TTAT-C-A---------------GCA-CTA-TGTGTA-------
i Tragulus_javanicus.TraJav_scaffold_124071              I 196 n 39
s Tupaia_chinensis.KB320699.1                              2151072 42 +   4065304 a-c--atgtgcaa--g-----tccttt------at--a--aa--tt-TCCT-C-A---------------ATG-ACA-TGTTTC-------
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     4370 42 -     10553 A-C--ATGTGCAA--G-----TTCTTT------AT--A--AA--TT-TCCT-C-A---------------ATG-GTA-TGCTTG-------
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15738439 38 +  33153633 -------CTGCTA--G-----TCCT--T----CAC--A--AA-TT--TTAC-C-A---------------CTG-TTA-TGCATA-------
i Tursiops_truncatus.MRVK01000835.1                      I 1 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   52243 22 -     77625 -------------------------------------A--AT--T--TTAC-C-A---------------GT--TCT-TGCCTA------A
i Uropsilus_gracilis.UroGra_scaffold_12083               I 25 C 0
s Ursus_maritimus.KK499267.1                               4847635 29 -   5085361 A-C--ACATGCAa--g-----tcat------ttat--a--ca--t-ttttt-t--------------------------------------
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   7718 22 +     50397 -----------------------------------------G--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------G
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              7772 22 +     24756 -----------------------------------------G--TG-TTGC-C-A---------------GTG-CTG-TGCTTG------G
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5369086 42 -   5488506 A-C--GCGTGCTA--G-----TCCT--------TTACA--AG-TT--TTAC-C-A---------------GTG-CTA-CGTGTA-------
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  8085 29 -     43706 A-C--ACATGCAA--G-----TCAT--T-T---AT--A--AA--T-TTTAT-C--------------------------------------
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        20389 43 -     24430 G-T--ATGTGCAA--A-----TTCTTC------AT--A--AA--AG-TTAC-T-A---------------GTG-TCG-TGTTTG------A
i Xerus_inauris.XerIna_scaffold_48378                    I 11 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          2343 29 +     86975 A-C--ACATGCAA--G-----TCAT--T-T---AT--A--AA--T-TTTAT-C--------------------------------------
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      11351 43 +     63895 A-T--CTGTGAAA--A-----TCTTTT------AT--A--AC--TC-TTAC-C-A---------------GTG-CCA-TGCTTG------A
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 29 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            12131 38 +     12536 -------GTGCTA--G-----TCCC--T----CAC--A--AA-TT--TTAC-C-A---------------GTG-TTA-TGCGTA-------
i Ziphius_cavirostris.ZipCav_flattened_line_71469        I 1 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1359220  0 +   3988456 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11256644 174 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Galagoides_demidoff.k141_31856                              3354  0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       2340 13 +     62944 GTTAAGAGAA--TTG
s Acinonyx_jubatus.LLWD01001279.1                           824492 13 -   1699592 GTTTACAGAA--TTG
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507748  7 -  29979442 ------agGA--TTG
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             76531  7 -    347723 ------AGAA--TTG
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     66025 11 -     89534 GGTTA--GAG--TTT
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   10319 13 -     52922 GGTAAGAGAA--TTG
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         10250 13 -     28001 GGTAAGAGAA--TTG
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                           696 13 -     18505 GGTAAGAGAA--TTG
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           1545 13 -     12518 GGTAAGAGAA--TTG
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          676085 13 -   2318259 AGTTAGAGAA--ATG
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             98568 13 -    100397 AGTTAGAGAA--CTA
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7962 13 +     20879 ATTTAGAGAA--TTC
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        15618 13 +     17124 GTGGAGAGAA--TCA
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Avahi_laniger.k141_765380                                  49995 13 -     92717 GTGGACAGAA--TTG
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              50624 13 +     85213 GTGGACAGAA--TTG
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15192333 13 +  23207421 AGTTAGAGAA--CTG
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2798 13 -     18090 AGTTAGAGAA--CTG
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    27009 13 +     34529 AGCTAGAGAA--ATG
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    200064 13 -    288883 AGTTAGAGAA--ATG
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20273269 13 +  48749331 AGTTAGAGAA--ATG
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1125825 13 -   1948126 AGTTAGAGAA--ATG
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18083907 13 +  45695690 AGTTAGAGAA--ATG
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2819576 13 +   4408762 AGTTAGAGAA--ATG
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9999638 13 -  17673402 AGTTAGAGAA--TCG
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2332102 13 -   7040546 AGTTAGAGAA--TTG
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  400378 13 -   1652518 AGTTAGAGAA--TCG
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17796491  7 -  60362399 ------AGAA--TTG
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182548  7 -    185531 ------AGAA--TTG
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031934  7 -   9314153 ------agAA--TTG
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17956199  7 -  59632846 ------agAA--TTG
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18497499  7 +  63665305 ------agAA--TTG
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18830203 13 +  46296322 AGTTAGAGAA--ATG
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18060923 13 -  44709034 AGTTAGAGAA--ATG
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           141742 13 -    496798 GTTAAGAAAA--TCA
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    134510 12 +    179628 -TTTAGGGAA--TTT
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     89996 13 +    217609 ACGTAGAGAA--TTG
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         5657 13 -      8605 GTTAAGAAAA--TCA
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12228606 13 +  27778364 GTTTAGAGAA--GTG
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          3324 13 -      3715 GTTTAGAGAA--GTG
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4471278 13 +   4669795 GGTAAGAGAA--TTG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         9827 13 -     19203 GGTAAGAGAA--TTG
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           4248 13 +      8260 GGTAAGAGAA--TTG
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           4476 13 +     27781 GGTAAGAGAA--TTG
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         4635 13 -     20310 GGTAAGAGAA--TTG
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           7619 13 +     29689 GGTAAGAGAA--TTG
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            2055 13 +      9989 GGTAAGAGAA--TTG
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          10302 13 -     27936 GGTAAGAGAA--TTG
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                            10329 13 -     11289 GGTAAGAGAA--TTG
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38812701 13 +  39242232 GGTAAGAGAA--TTG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21218400 13 -  21565898 GGTAAGAGAA--TTG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       35519 13 -     53127 GGTAAGAGAA--TTG
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        2804 13 +      7159 GGTAAGAGAA--TTG
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       10322 13 -     27947 GGTAAGAGAA--TTG
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         10298 13 +     17596 GGTAAGAGAA--TTG
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         40799 13 -     41420 GGTAAGAGAA--CTG
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            5556 13 -      6351 GTTTACAGGA--CAC
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             17416 13 -     52598 GTGGGCAGAA--TTG
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12766 13 +     57038 GTGGACAGAA--TTG
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chlorocebus_aethiops.ctg25                              18424260 13 -  18827391 GGTAAGAGAA--TTG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       10702 13 -     50209 GGTAAGAGAA--TTG
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135417706 13 + 135778131 GGTAAGAGAA--TTG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15848 12 +     19366 GTTTACAGGT--CC-
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170947 12 +    839153 GTTTACAGGT--CC-
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1906217 13 +   2368649 GGTAAGAGAA--TTG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199945886 13 + 200372422 GGTAAGAGAA--TTG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              32758 13 +     84244 GGTAAGAGAA--TTG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17547013 13 -  53390261 ATTTAAAGAA--TTG
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          11249 13 -     20389 GTTTCAAGAA--TTA
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetulus_griseus.LT883664.1                           11663995 13 + 224834208 GGTTAGATAA--TTT
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_287352              1205 13 +      4208 ACCTGGAGAA--TGG
i Crocidura_indochinensis.CroInd_scaffold_287352         I 15 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             25662 13 -     87169 ATTTACAGAA--TTG
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            61826 13 +   2246927 GTTTACAGGA--TCC
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12533598 13 -  12879189 ATGGAGGGAA--TTG
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811969 13 +  35494412 AGTTAGAGAA--CTG
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  670459 13 +   1390856 GTTTAGAGAA--GTG
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    3214 13 +    198055 GTTTAGGGAA--GTG
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE759718.1                                   8164 13 +     11740 gtttagagag--ttG
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       311240 13 +    607251 AGTTAGAGAA--TTG
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          12793 13 -    110024 agttagataa--ttt
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01123422.1                            3756 13 +      5358 AGTTAGATAA--TTT
i Ellobius_talpinus.LOJH01123422.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16326511  7 -  41312741 ------agAA--TTG
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1280499 13 +   4378816 GTTTAGAGAA--TTG
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18528320 13 -  39960074 GTTTAGAGAA--TTG
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               30335 13 +    498745 GTTTAGAGAA--TTG
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21200892 13 -  21539334 GGTAAGAGAA--TTG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11645 13 +    133382 AGTTAGAGAA--CTG
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             25582 13 -     44125 AGTTAGAGAA--CTG
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Eulemur_albifrons.k141_342033                              10097 13 -     14127 GTGGACAGAA--TTG
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                2795 13 -     16928 GTGGACAGAA--TTG
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              11828 13 -     25546 ATGGACAGAA--TTG
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             9013 13 +     26330 ATGGACAGAA--TTG
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 10270 13 +     23973 GTGGACAGAA--TTG
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 9013 13 +     75513 ATGGACAGAA--TTG
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  6965 13 +     97555 GTGGACAGAA--TTG
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                             9891 13 +     26496 GTGGACAGAA--TTG
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                   497 13 -     17153 GTGGACAGAA--TTG
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              10076 13 +    111500 GTGGACAGAA--CTG
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20234357 13 + 206538554 GTTTACAGAA--TTG
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20193202 13 + 205367284 GTTTACAGAA--TTG
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  6714 13 -     36744 GTTTACAGAA--TTG
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_266699                309 13 +      2098 GTTTAGAGAA--TTG
i Galeopterus_variegatus.GalVar_scaffold_266699          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     609205 13 -    660261 AGTTAGAGAA--TTG
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            31024 13 +     49224 GTTCAGAGAA--TTC
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              11575 13 -     32273 GTTAAGAGAA--TTG
i Gorilla_beringei.k141_3596273                          I 109 C 0
s Gorilla_gorilla.LT578341.1                             186333723 13 + 186649187 GTTAAGAGAA--TTG
i Gorilla_gorilla.LT578341.1                             I 43 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   30744 13 +     78134 GTTCAGAGAA--TTC
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           3161 13 -     19426 GTGGACAGAA--TTG
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              8305 13 -     15286 GTGGACAGAA--TTG
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                              9943 13 +     18253 GTGGACAGAA--TTG
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         10046 13 -     41752 GTGGACAGAA--TTG
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                          9879 13 -     16460 GTGGACAGAA--TTG
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               239488 13 +    327341 ATTTACAGAA--TTG
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18409 13 +     36099 AGTTAGAGAA--ATG
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       109025 13 +   1711038 gtTTAGAGAA--TTG
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               40461 13 +     43066 gtTTAGAGAA--TTG
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    430467 13 +    630532 GTTAAGAGAA--TTG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  41646 13 +     55795 ACTTACAGAA--TTG
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_307679                               13398 13 -     15490 GTTAAGAGAA--TTG
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              55404 13 +     67168 GTTAAGAGAA--TTG
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189539054 13 - 191637585 GTTAAGAGAA--TTG
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3331947 13 -  11177569 GTTAAGAGAA--TTG
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7515287 13 -   7955117 ATTTAGAGAA--TTC
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   18862 13 +     31101 GTGGACAGAA--TTG
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               23186 13 +     23964 AGTTAGAGAA--CTG
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8272392 13 -   9596543 GGTTACAGAA--TTT
i Jaculus_jaculus.JH725527.1                             C 0 I 9
s Kogia_breviceps.KogBre_flattened_line_192630                2543 13 -      3359 AGTTAGAGAA--CTG
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lemur_catta.scaffold_24                                 15520406 13 -  30322482 GTGGACAGAA--TTG
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          7317 13 -     23766 GTGGACAGAA--CTG
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             25264 13 +     45836 GTGGACAGAA--CTG
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         32176 13 -     32627 GTGGACAGAA--CTG
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      23319 13 +     54090 GTGGACAGAA--CTG
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3039660  7 +   3914936 ------agaA--TTG
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             268238 13 -    662738 AGTTAGAGAA--CTG
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1432823 13 +   1826925 GGTAAGAGAA--TTG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            1849 13 +     11245 GTGGAGAGAA--TCA
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1000686 13 +   6120653 GTGGAGAGAA--TCA
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17952439  7 -  59628241 ------agAA--TTG
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               2644 13 +     40492 GGTAAGAGAA--TTG
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59671899 13 +  60120075 GGTAAGAGAA--TTG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  8399 13 -     26193 GGTAAGAGAA--TTG
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            76196 13 -    114318 GGTAAGAGAA--TTG
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  1911 13 -     23192 GGTAAGAGAA--TTG
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                11364 13 -     29190 GGTAAGAGAA--TTG
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  19931 13 +     37952 GGTAAGAGAA--TTG
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186835019 13 + 187317192 GGTAAGAGAA--TTG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25453582 13 -  25927173 GGTAAGAGAA--TTG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  75780 13 +     89720 GGTAAGAGAA--TTG
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 2778 13 +     20474 GGTAAGAGAA--TTG
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   2579 13 -     14993 GGTAAGAGAA--TTG
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  325451 13 -    668171 GGTAAGAGAA--TTG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                  882 13 -     24072 GGTAAGAGAA--TTG
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               21518 13 -     45290 GGTAAGAGAA--TTG
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88253 13 +     94391 gtTTAGAGAG--CTG
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23933066 13 -  24302211 GGTAAGAGAA--TTG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               347243 13 +    752769 GGTAAGAGAA--TTG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              16330 12 +    737560 ATTTAAAGAA--TT-
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              47715 12 -    317179 atttaaagaa--tt-
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33098136 13 -  40650429 ATTTAGAGAA--TTC
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         7538 13 -    207569 GTCTAGGGAA--TTG
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              7219  7 +     13704 ------AGAA--TTG
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12178388 13 -  29670104 AGTTAGATAA--TTT
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3854 13 +     10310 ACTTAGAGAA--CTG
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18287801 12 -  93316391 GTGGACAGA---TTG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_534055                           4817 13 -     28506 GGTAAGAGAA--TTG
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         2496  7 -      8324 ------AGAA--TTG
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      5369 12 -     37649 GTAGACAGA---TTG
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    27359 13 -    437263 AGTTAGAGAA--CTG
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138562 13 -    366855 CTTTAGA--GAACTG
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   1289 13 +     82753 AGTTAGAGAA--CTG
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   32591 13 +     37127 ATTTACAGAA--TTG
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              3044 13 +     14296 ATTCAGAAAA--TTC
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               298409  7 -  14710649 ------AGAG--TTG
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186766 13 +    196477 GTTTACAGGA--CCT
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.AXCS01343547.1                            305 13 +       996 GGTTAGAGAA--TTT
i Nannospalax_galili.AXCS01343547.1                      C 0 C 0
s Nasalis_larvatus.k141_413338                               10817 13 +     21681 GGTAAGAGAA--TTG
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5866315 13 +   7148211 AGTTAGAGAA--CTG
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    757096 11 +    783361 ATTCGGA--G--CTG
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146700  7 -   9404916 ------ataA--TTG
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102575669 13 - 196305487 GTGGAGAGAA--TCA
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             3355 13 +      8486 GTGGAGAGAA--TCA
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105746096 13 + 199412804 GTGGAGAGAA--TCA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                              503802  7 -   2017862 ------agaA--TTG
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          77122 13 -    150152 AGTTAGAGAA--TTG
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   17015  9 +     28053 ----AGATAA--TTT
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    75156 13 +    102263 GGTTAGATAA--TTT
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2782238 13 -  10937097 AGTTAGAGAA--CTG
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       459454  7 -    559221 ------agAA--TTG
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17586384 13 +  44047080 AGTTAGAGAA--ATG
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      174361 13 -    191736 AGTTAGAGAA--ATG
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    39692 13 +     80009 GTTAAGAGAA--TTG
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189138585 13 + 189151597 GTTAAGAGAA--TTG
i Pan_troglodytes.CM009242.2                             C 0 I 44
s Panthera_onca.PanOnc_flattened_line_3271                  148363 13 +    230217 GTTTACAGAA--TTG
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                261570 13 +  18783137 GTTTACAGAA--TTG
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4718207 13 -   8748460 GTTTACAGAA--TTG
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1265278 13 -   2937107 AGTTAGAGAA--ATG
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183438852 13 + 183742232 GGTAAGAGAA--TTG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             2545 13 +     20448 GGTAAGAGAA--TTG
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20559350 13 +  20919399 GGTAAGAGAA--TTG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   1288 13 +     41871 GGTAAGAGAA--TTG
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     4574 13 +     27711 GGTAAGAGAA--TTG
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  4656 10 +      9205 ---AAGAGAA--TTG
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9830 13 -     78924 AATTACAGAA--TCG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 1 C 0
s Perodicticus_ibeanus.k141_855320                            5851 13 +     13100 GTGGAGAGAA--TCA
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             4224 13 +     25941 GTGGAGAGAA--TCA
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18187944 13 -  18517816 GGTGAGATAA--TTT
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               9277 13 +     63832 AGTTAGAGAA--CTG
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           39329 13 +     62158 GGTAAGAGAA--TTG
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        34051 13 +     89929 GGTAAGAGAA--TTG
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            35467 13 +     51399 GGTAAGAGAA--TTG
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14291703 13 -  14605196 GGTAAGAGAA--TTG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34983 13 +     35617 AGTTAGAGAA--CTG
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189126777 13 + 189387572 GTTAAGAGAA--TTG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9566383 13 +   9816681 GTTAAGAGAA--TTG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68978 13 -     81375 GGTAAGAGAA--TTG
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                               799 13 +     19060 GGTAAGAGAA--TTG
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2593058 13 -   4620579 GTGGACAGAA--TTG
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     987071 13 +   2598838 GTGGACAGAA--TTG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          25360 13 +     38485 GTGGACAGAA--TTG
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             1519 13 +      4256 GTGGACAGAA--TTG
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22879 13 +     35766 GTGGACAGAA--TTG
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           1062 13 -     24134 GTGGACAGAA--TTG
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24874 13 -     67325 GTGGACAGAA--TTG
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           1119 13 -      6182 GTGGACAGAA--TTG
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11951 13 -     21811 ACTTAGA--GAATTG
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         37419  7 +     42204 ------AGAA--TTG
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22974434 13 +  28871421 GCTTAGAGAG--TTG
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1357524 13 +   4952924 gcttagagag--ttG
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20271489 13 -  38429054 GTTTACAGAA--TTG
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             10810 13 -     91421 GGTAAGAGAA--TTG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7604938 13 +   7812017 GGTAAGAGAA--TTG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10779 13 -     72585 GGTAAGAGAA--TTG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5861 13 +     55207 AGTTAGAGAA--TTG
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinopithecus_bieti.k119_217274                             2494 13 -     11128 GGTAAGAGAA--TTG
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91231849 13 - 195417433 GGTAAGAGAA--TTG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7667498 13 +   7961872 GGTAAGAGAA--TTG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85435 13 -     96226 gtttagagag--ttG
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    152064 13 -    313613 ATTTAGAGAA--TTG
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 9 C 0
s Semnopithecus_entellus.k141_11662                          15322 13 -     19888 GGTAAGAGAA--CTG
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      22524 13 +     39453 GGTAAGAGAA--CTG
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            3050 13 +     27826 GGTAAGAGAA--CTG
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             2571 13 -     19483 GGTAAGAGAA--CTG
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      2633 13 +      7198 GGTAAGAGAA--CTG
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         10893 13 +     15514 GGTAAGAGAA--CTG
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            188393 13 -    191337 ACTTAGAAAA--CTT
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13648577 12 -  18376816 -CTTAATAAC--ATT
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1948919 13 -   3870691 ATTTAGAGAA--TTC
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27935  7 +     97271 ------AGAA--TTG
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              15497 13 -    196729 ATTTACATAA--TTG
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.JH118708.1                                      32479 13 -     47482 ACGAAGAGAA--TTG
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1089098 13 -   1523678 GTTAAGAGAA--TTG
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 7534 13 +     41958 ATTTAGAAAA--TTG
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 70120 13 +    116680 GTTTGCAGGA--CCT
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115940 13 -    156842 ATTTAGAGAA--GTG
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    384391 13 +    539355 ATTTAGAGAA--GTG
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               11355 13 +     70052 GTTAAGAAAA--GCA
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               15660 13 +     25099 GTTAAGAAAA--TCA
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186423896 13 + 186847797 GGTAAGAGAA--TTG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   2697 13 +      8208 GTCTGCAGGA--CCC
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Trachypithecus_auratus.k141_722599                          6624 13 -     20410 GGTAAGAGAA--CTG
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    10820 13 +     15221 GGTAAGAGAA--CTG
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        6725 13 +     19930 GGTAAGAGAA--CTG
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       3155 13 -     19997 GGTAAGAGAA--CTG
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            43274 13 -     60166 GGTAAGAGAA--CTG
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        10747 13 -     27529 GGTAAGAGAA--CTG
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     10687 13 -     18194 GGTAAGAGAA--CTG
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           4422 13 -     21137 GGTAAGAGAA--CTG
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    3125 13 -     10723 GGTAAGAGAA--CTG
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         2277 13 +      9834 GGTAAGAGAA--CTG
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        20595 13 +     32220 GGTAAGAGAA--CTG
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5934692 13 +   6242583 GGTAAGAGAA--CTG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        3939 13 +     20839 GGTAAGAGAA--CTG
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                   1535 13 -      1748 AATTAGAGAA--TTG
i Tragulus_javanicus.TraJav_scaffold_140459              I 39 C 0
s Tupaia_chinensis.KB320699.1                              2151114 12 +   4065304 -TTTAGAAAA--Ctg
i Tupaia_chinensis.KB320699.1                            C 0 I 268
s Tupaia_tana.TupTan_flattened_line_97126                     4412 12 -     10553 -TTTAGAAAA--TTG
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 292
s Tursiops_truncatus.MRVK01000835.1                       15738477 13 +  33153633 AGTTAGAGAA--CTG
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   52265 13 -     77625 ATTTAGAGTA--TTG
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4847664  7 -   5085361 ------agga--TTG
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   7740 13 +     50397 GTGGACAGAA--TTG
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              7794 13 +     24756 GTGGACAGAA--TTG
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5369128 13 -   5488506 AGTTAGAGAA--TCG
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  8114  7 -     43706 ------AGAA--TTG
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        20432 13 -     24430 GTTCAGAGAA--TTC
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          2372  7 +     86975 ------AGAA--TTG
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      11394 13 +     63895 AGTTACAGAG--TTT
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            12169 13 +     12536 ACTTAGAGAA--CTG
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Mus_spretus.CM004101.1                                  90748383 358 - 130317789 I
e Mus_musculus.chr8                                       87646309 357 - 129401213 I
e Mus_caroli.LT608237.1                                   84357336 358 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rattus_norvegicus.chr16                                 53566216 434 +  90668790 I
e Psammomys_obesus.NESX01036370.1                             5904 349 -     21651 I
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1359220  0 +   3988456 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11256644 174 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 28263 354 +    140813 I
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Galagoides_demidoff.k141_31856                              3354  0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 47011 110 +     63868 I
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66741 239 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       2353 44 +     62944 GTG---GCCAAACTAGAAA----C-CAACTCA-------TT-TTCAGTAGC-------T----------A-------CAC-AG-A----C
s Acinonyx_jubatus.LLWD01001279.1                           824505 47 -   1699592 GTG---ATCAAACTAGAAACCAAC-CCACTCA-------TT-T-------CCAGTAGAC----------A-------CT--TA-G----C
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 3
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507755 28 -  29979442 GTA---ATCAAACTAGAAA----C-CCACTCA-------TT-T-------A---------------------------------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 16
s Ailurus_fulgens.LNAC01001112.1                             76538 28 -    347723 GTA---CTCAAACTAGAAA----C-CCACTCA-------TT-T-------A---------------------------------------
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 16
s Allactaga_bullata.AllBul_scaffold_9566                     66036 38 -     89534 ATA---GTCAAACTAGA-G----C-TCACTCA-------TT-A-CAGTA---------A----------A--------G--AA-C----C
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   10332 44 -     52922 GTG---GTCAGACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AC-A----C
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         10263 44 -     28001 GTG---GTCAGACTAGAAA----C-CCTCTCG-------TT-TTCAGTAGC-------T----------A-------CAA-AC-A----C
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                           709 44 -     18505 GTG---GTCAGACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AC-A----C
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           1558 44 -     12518 GTG---GTCAGACTAGAAA----C-CCTCTCG-------TT-TTCAGTAGC-------T----------A-------CAA-AC-A----C
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          676098 43 -   2318259 CTG---GTCACTttagaaa----t-tcattca-------tt-t-------tcagtgGAC----------A-------CA--GG-C----C
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             98581 43 -    100397 GCG---GTCACTTTAGAGA----A-TCATTCA-------TT-T-------TCAGTGGAC----------A-------CA--TG-C----C
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       7975 43 +     20879 ATG---GTCAGTGTGGAAG----TTGCACTCA-------TT-A-CAGAGCA-------C----------A-------CA--AA-C----C
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        15631 43 +     17124 ATG---GTCAAACAAGACA----C-CCACCC--------TG-GACAGCAGC-------C----------A-------CA--CACC----A
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Avahi_laniger.k141_765380                                  50008 42 -     92717 A-G---GTCAAACTAGACA----C-CCACCCC-------TT-GACAGCAGC-------C----------A-------CT--GC-C----C
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              50637 42 +     85213 A-G---GTCAAACTAGACA----C-CCACCCC-------TT-GACAGCAGC-------C----------A-------CT--GC-C----C
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15192346 43 +  23207421 GTG---ATCAAATTAGAAG----C-CCAATCA-------TT-T-------ACAGCAGAC----------A-------CA--TA-C----C
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2811 43 -     18090 GTG---ATCAAATTAGAAG----C-CCAATCA-------TT-T-------ACAGCAGAC----------A-------CA--TA-C----C
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    27022 43 +     34529 GTG---GTCACTTTAGAAA----T-TCTTTCA-------TT-T-------TCAGTGGAC----------A-------CA--GG-C----C
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    200077 43 -    288883 GTG---GTCACTGtagaaa----t-tcattca-------tt-t-------tcagtgGAC----------A-------CA--GG-C----C
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20273282 43 +  48749331 GTG---GTCACTGtagaaa----t-tcattca-------tt-t-------tcagtgGAC----------A-------CA--GG-C----C
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1125838 43 -   1948126 GTG---GTCACTGtagaaa----t-tcattca-------tt-t-------tcagtgGAC----------A-------CA--GG-T----C
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18083920 43 +  45695690 GTG---GTCACTGtagaaa----t-tcattca-------tt-t-------tcagtgGAC----------A-------CA--GG-C----C
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2819589 43 +   4408762 GTG---GTCACTgtagaaa----t-tcattca-------tt-t-------tcagtgGAC----------A-------TA--GG-C----C
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9999651 43 -  17673402 GTG---GTCAAATTAGAAA----C-CCACTCA-------TT-T-------A-------C----------AGCCGACTCA--TA-C----C
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2332115 43 -   7040546 GTG---GTCAAATTAGAAA----C-CCACTCG-------TT-T-------A-------C----------AGCTGACTCA--TA-C----C
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  400391 43 -   1652518 GTG---GTCAAATTAGAAA----C-CCACTCA-------TT-T-------A-------C----------AGCCGACTCA--TA-C----C
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17796498 43 -  60362399 GTA---ATCAAACTAGAAA----C-CCACTCA-------TT-T-------ACAATAGAT----------A-------CA--CA-C----C
i CanFam4.chr16                                          C 0 I 3
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182555 43 -    185531 GTA---ATCAAACTAGAAA----C-CCACTCA-------TT-T-------ACAATAGAT----------A-------CA--CA-C----C
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 I 3
s Canis_lupus_dingo.QKWQ01000480.1                         9031941 43 -   9314153 GTA---ATCAAACTAGAAA----C-CCACTCA-------TT-T-------ACAATAGAT----------A-------CA--CA-C----C
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 3
s Canis_lupus_familiaris.chr16                            17956206 43 -  59632846 GTA---ATCAAACTAGAAA----C-CCACTCA-------TT-T-------ACAATAGAT----------A-------CA--CA-C----C
i Canis_lupus_familiaris.chr16                           C 0 I 3
s Canis_lupus_orion.HG994398.1                            18497506 43 +  63665305 GTA---ATCAAACTAGAAA----C-CCACTCA-------TT-T-------ACAATAGAT----------A-------CA--CA-C----C
i Canis_lupus_orion.HG994398.1                           C 0 I 3
s Capra_aegagrus.CM003241.1                               18830216 43 +  46296322 CTG---GTCACTttagaaa----t-tcattca-------tt-t-------ccaGCGGAC----------A-------CA--GG-C----C
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18060936 43 -  44709034 CTG---GTCACTttagaaa----t-tcattca-------tt-t-------tcagcGGAC----------A-------CA--GG-C----C
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           141755 44 -    496798 ACG----CCAGACTAGAAAC---T-CTGCTCA-------CT-GATGGTAGC-------C----------A-------CC-TAC-A----A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    134522 40 +    179628 GT----GTCAAACTAGAGG----C--TCCTTA-------TT-A-CAGTAGA-------C----------A-------CA--TG-C----C
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     90009 43 +    217609 GCA---GTCAAATTAAAAA----T-CCACTCA-------TT-T-------ACAGTGGAC----------A-------CA--TA-C----C
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         5670 44 -      8605 ACG----CCAGACTAGAAAC---T-CTGCTCA-------TT-GACGGTAGC-------C----------A-------CC-TAC-A----A
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12228619 43 +  27778364 GTA---GTGAAACTAGAAA----A-CCACTCA-------TT-T-------ACTGTAGAC----------A-------CA--CA-C----C
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          3337 43 -      3715 GTA---GTGAAACTAGAAA----A-CCACTCA-------TT-T-------ACTGTAGAC----------A-------CA--CA-C----C
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4471291 44 +   4669795 GTG---GTCAGACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AC-A----C
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         9840 44 -     19203 GTG---GTCAGACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AC-A----C
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           4261 44 +      8260 GTG---GTCAGACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AC-A----C
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           4489 44 +     27781 GTG---GTCAGACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AC-A----C
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         4648 37 -     20310 GTG---GTCAGACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A--------------------
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           7632 37 +     29689 GTG---GTCAGACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A--------------------
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            2068 37 +      9989 GTG---GTCAGACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A--------------------
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          10315 37 -     27936 GTG---GTCAGACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A--------------------
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                            10342 37 -     11289 GTG---GTCAGACTAGAAA----C-CCTCTCA-------TT-TTCAATAGC-------T----------A--------------------
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38812714 37 +  39242232 GTG---GTCAGACTAGAAA----T-CCTCTCA-------TT-TTCAGTAGC-------T----------A--------------------
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21218413 37 -  21565898 GTG---GTCAGACTAGAAA----C-CCTCTCA-------TT-TTCAATAGC-------T----------A--------------------
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       35532 37 -     53127 GTG---GTCAGACTAGAAA----C-CCTCTCA-------TT-TTCAATAGC-------T----------A--------------------
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        2817 37 +      7159 GTG---GTCAGACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A--------------------
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       10335 37 -     27947 GTG---GTCAGACTAGAAA----C-CCTCTCA-------TT-TTCAATAGC-------T----------A--------------------
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         10311 37 +     17596 GTG---GTCAGACTAGAAA----C-CCTCTCA-------TT-TTCAATAGC-------T----------A--------------------
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         40812 37 -     41420 GTG---GTCAGACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A--------------------
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            5569  3 -      6351 --------------------------------------------------A-------C----------A--------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 I 2
s Cheirogaleus_major.k141_333249                             17429 43 -     52598 ATG---GTCAAACTAGGCA----C-CCACCTC-------TT-GACAGCAGC-------C----------A-------CA--GC-C----A
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12779 43 +     57038 ATG---GTCAAACTAGGCA----C-CCACCTC-------TT-GACAGCAGC-------C----------A-------CA--GC-C----A
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chlorocebus_aethiops.ctg25                              18424273 37 -  18827391 GTG---GTCAGACTAGAAA----C-CCTCTCG-------TT-TTTAGTAGC-------T----------A--------------------
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       10715 37 -     50209 GTG---GTCAGACTAGAAA----C-CCTCTCG-------TT-TTCAGTAGC-------T----------A--------------------
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135417719 37 + 135778131 GTG---GTCAGACTAGAAA----C-CCTCTCG-------TT-TTCAGTAGC-------T----------A--------------------
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15860 42 +     19366 TTG---GTCAAATTACAAA----C--AACTCA-------TT-T-------A-------C----------AGTAGACACA--TA-T----C
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            170959 42 +    839153 TTG---GTCAAATTACAAA----C--AACTCA-------TT-T-------A-------C----------AGTAGACACA--TA-T----C
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1906230 44 +   2368649 ATG---GTCAAACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AC-A----C
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199945899 44 + 200372422 ATG---GTCAAACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AC-A----C
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              32771 44 +     84244 ATG---GTCAAACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AC-A----C
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17547026 36 -  53390261 GTA---GTCAAACTAGAAA----A-GATCTCA-------TT-T-------A-------C----------A-------GT--AG-A----C
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          11262 41 -     20389 GTG---GTCACACTAGAAA----C-CCACTCA-------TT-T-------A-------C---AGTAG--A-------CA--TA-C----C
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetulus_griseus.LT883664.1                           11664008 43 + 224834208 ATG---ACCAAACAAGAAG----C-CCATTTA-------TTTG-CCATAGA-------C----------A-------CA--AA-C----C
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_287352              1218  7 +      4208 GTG--------ACT--A-------------------------------------------------------------------------
i Crocidura_indochinensis.CroInd_scaffold_287352         C 0 I 61
s Cryptoprocta_ferox.CryFer_flattened_line_16129             25675 37 -     87169 GTA---ATCAAACTAGACA----C-CCACTCA-------TT-C-------ACAGTAGAC----------A--------------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 5
s Dasypus_novemcinctus.JH564415.1                            61839 43 +   2246927 CTG---GTCGAATTAGAAA----C-CAAATCA-------TT-T-------A-------T----------AATAGATTCA--AA-T----A
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12533611 43 -  12879189 ACG---GTCAAACTAGACG----C-CCAACTC-------TT-GACAACAGC-------C----------A-------CA--CG-C----C
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16811982 43 +  35494412 GTG---ATCAAATTAGAAG----C-CCAATCA-------TT-T-------ACAGTAGAC----------A-------CA--TA-C----C
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  670472 43 +   1390856 GTA---GTGAAACTAGAAA----A-CTACTCA-------TT-T-------ACTGTAGAC----------A-------CA--CA-C----C
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    3227 43 +    198055 GTA---GTGAAACTAGAAA----A-CCACTCA-------TT-T-------ACTGTAGAC----------A-------CA--CA-C----C
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE759718.1                                   8177 39 +     11740 GTG---GTCAAACTAGAAA----C-TCACTTG-------TT-T-------A-------T---A--AG--A-------CA--TG-C----C
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       311253 43 +    607251 GTG---GTCACTTTAGAAA----C-TCATTCA-------TT-T-------TCAGTGGAC----------A-------CA--GG-C----C
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          12806 42 -    110024 atg---attaaac-agcag----t-ccactta-------ttta-ccataga-------t----------t-------ca--aa-c----c
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01123422.1                            3769 42 +      5358 ATG---GTTAAAC-AGCAG----T-CCATTTA-------TTTA-CCATAGA-------T----------T-------CA--AA-C----C
i Ellobius_talpinus.LOJH01123422.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16326518 28 -  41312741 GTA---CTCAAACTAGAAA----C-CCACTCA-------TT-T-------A---------------------------------------
i Enhydra_lutris.KZ291758.1                              C 0 I 17
s Equus_asinus.JREZ01000139.1                              1280512 43 +   4378816 ATG---GTCAAACTAGAAA----A-CCACTCA-------TT-T-------ACTGTAGAC----------A-------CA--TA-C----C
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18528333 43 -  39960074 ATG---GTCAAACTAGAAA----A-CCACTCA-------TA-T-------ACTGTAGAC----------A-------CA--TA-C----C
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               30348 43 +    498745 ATG---GTCAAACTAGAAA----A-CCACTCA-------TA-T-------ACTGTAGAC----------A-------CA--TA-C----C
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21200905 44 -  21539334 GTG---GTCAGACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AC-A----C
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11658 43 +    133382 GTG---ATCCAGTTAGAAG----C-CCAATCA-------TT-T-------ACAGTAGAC----------A-------CA--TA-C----C
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             25595 43 -     44125 GTG---ATCAAATTAGAAG----C-CCAATCA-------TT-T-------ACAGTAGAC----------A-------CA--TA-C----C
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Eulemur_albifrons.k141_342033                              10110 43 -     14127 ATG---GTCAAACTAGGCA----C-CCACCCC-------CT-GACAGCAGC-------C----------A-------CA--GC-C----A
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                2808 43 -     16928 ATG---GTCAAACTAGGCA----C-CCACCCC-------CT-GACAGCAGC-------C----------A-------CA--GC-C----A
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              11841 43 -     25546 ATG---GTCAAACTAGGCA----C-CCACCCC-------CT-GACAGCAGC-------C----------A-------CA--GC-C----A
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             9026 43 +     26330 ACG---GTCAAACTAGGCA----C-CCACCCC-------CT-GACAGCAGC-------C----------A-------CA--GC-C----A
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 10283 43 +     23973 ATG---GTCAAACTAGGCA----C-CCACCCC-------CT-GACAGCAGC-------C----------A-------CA--GC-C----A
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 9026 43 +     75513 ATG---GTCAAACTAGGCA----C-CCACCCC-------CT-GACAGCAGC-------C----------A-------CA--GC-C----A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  6978 42 +     97555 ATG---GTCAAACTAGGCA----C-CCACCCC--------T-GACAGCAGC-------C----------A-------CA--GC-C----A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                             9904 43 +     26496 ATG---GTCAAACTAGGCA----C-CCACCCC-------CT-GACAGCAGC-------C----------A-------CA--GC-C----A
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                   510 43 -     17153 ATG---GTCAAACTAGGCA----C-CCACCCC-------CT-GACAGCAGC-------C----------A-------CA--GC-C----A
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              10089 43 +    111500 ATG---GTCAAACTAGGCA----C-CCACCCC-------CT-GACAGCAGC-------C----------A-------CA--GC-C----A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20234370 47 + 206538554 GTG---ATCAAACTAGAAACCAAC-CCACTCA-------TT-T-------CCAGTAGAC----------A-------CT--TA-G----C
i Felis_catus.CM001381.2                                 C 0 I 3
s Felis_catus_fca126.CM031415.1                           20193215 47 + 205367284 GTG---ATCAAACTAGAAACCAAC-CCACTCA-------TT-T-------CCAGTAGAC----------A-------CT--TA-G----C
i Felis_catus_fca126.CM031415.1                          C 0 I 3
s Felis_nigripes.FelNig_flattened_line_20823                  6727 47 -     36744 GTG---ATCAAACTAGAAACCAAC-CCACTCA-------TT-T-------CCAGTAGAC----------A-------CT--TA-G----C
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 3
s Galeopterus_variegatus.GalVar_scaffold_266699                322 43 +      2098 GTG---GTCAAACTAGAAA----C-CCACCCA-------TT-TACACTGGA-------T----------A-------CA--GA-C----A
i Galeopterus_variegatus.GalVar_scaffold_266699          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     609218 43 -    660261 GTG---GTCACTTTAGaaa----c-tcattca-------tt-t-------tcattggaC----------A-------CA--TG-C----C
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            31037 42 +     49224 ATC---ATCCAACTAGAAG----T-CCACTCA-------CT-T-CAAGACA-------C----------A-------CA--TA-C----C
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              11588 44 -     32273 GTG---GCCAAACTAGAAA----C-CAACTCA-------TT-TTCAGTAGC-------T----------A-------CAC-AG-A----C
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186333736 44 + 186649187 GTG---GCCAAACTAGAAA----C-CAACTCA-------TT-TTCAGTAGC-------T----------A-------CAC-AG-A----C
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   30757 42 +     78134 ATC---CTCCAACTAGAAA----T-CCACTCA-------CT-T-CAAGACA-------C----------A-------CA--TG-C----C
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           3174 43 -     19426 ATG---GTCAAACTAGGCA----C-CCACCCC-------CT-GACAGCAGC-------T----------A-------CA--GC-C----A
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              8318 43 -     15286 ATG---GTCAAACTAGGCA----C-CCACCCC-------CT-GACAGCAGC-------T----------A-------CA--GC-C----A
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                              9956 43 +     18253 ATG---GTCAAACTAGGCA----C-CCACCCC-------CT-GACAGCAGC-------T----------A-------CA--GC-C----A
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         10059 43 -     41752 ATG---GTCAAACTAGGCA----C-CCACCCC-------CT-GACAGCAGC-------T----------A-------CA--GC-C----A
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                          9892 43 -     16460 ATG---GTCAAACTAGGCA----C-CCACCCC-------CT-GACAGCAGC-------T----------A-------CA--GC-C----A
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               239501 37 +    327341 GCA---ATCCGACTAGAAA----C-CCACTCA-------TT-T-------ACAGTAGAC----------A--------------------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 5
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18422 43 +     36099 GTG---GTCGCTTTAGAAA----T-TCATTCA-------TT-T-------TCAGTGGAC----------A-------CA--GG-C----C
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       109038 41 +   1711038 GTG---TTCAAACCAGAAA----T-CCACTTA-------TT-T-------A-------C---AGTAG--A-------CA--TA-A----C
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               40474 41 +     43066 GTG---TTCAAACCAGAAA----T-CCACTTA-------TT-T-------A-------C-G--GTAG--A-------CA--TA-A----C
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    430480 44 +    630532 GTG---GTCAAACTAGAAA----T-CCACTTA-------TT-TTCAGTAGC-------T----------A-------TAT-AC-A----C
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  41659 43 +     55795 GTA---ATCAAACTAGAAA----T-GCACTCA-------TT-T-------ATAGTAGAC----------A-------CT--TA-C----C
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 3
s Hylobates_agilis.k141_307679                               13411 44 -     15490 GTG---GTCAAACTAGAAA----T-CCACTTA-------TT-TTCAGTAGC-------T----------A-------TAT-AC-A----C
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              55417 44 +     67168 GTG---GTCAAACTAGAAA----T-CCACTTA-------TT-TTCAGTAGC-------T----------A-------TAT-AC-A----C
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189539067 44 - 191637585 GTG---GTCAAACTAGAAA----T-CCACTTA-------TT-TTCAGTAGC-------T----------A-------TAT-AC-A----C
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3331960 44 -  11177569 GTG---GTCAAACTAGAAA----T-CCACTTA-------TT-TTCAGTAGC-------T----------A-------TAT-AC-A----C
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7515300 42 -   7955117 ATG---GTCAACCTAGAAG----C-CCACTCA-------TT-C-CAGTGCA-------C----------A-------CA--TA-C----C
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   18875 43 +     31101 ATG---ATCAAACTAGACA----C-CCACCCC-------TT-GACAGTAGC-------C----------A-------CT--GC-C----G
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               23199 43 +     23964 GTG---ATCAAATTAGAAG----C-CCAATCA-------TT-T-------ACAGTAGAC----------A-------CA--TA-C----C
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8272414 13 -   9596543 ------------------------------------------A-AAGTA---------A----------A--------G--AA-C----C
i Jaculus_jaculus.JH725527.1                             I 9 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                2556 43 -      3359 GTG---ACCAAATTAGAAG----C-CCAATCA-------TT-T-------ACAGTAGAC----------A-------CA--TA-C----C
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lemur_catta.scaffold_24                                 15520419 43 -  30322482 ATG---GTCAAACTAGGCA----C-CCACCCC-------CT-GACAGCAGC-------T----------A-------CA--GC-C----A
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          7330 43 -     23766 ACG---GTCAAACTAGACA----C-CCGCTCT-------GT-GACAGCAGT-------C----------A-------CA--GC-C----A
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             25277 43 +     45836 ATG---GTCAAACTAGACA----C-CCGCTCT-------GT-GACAGCAGT-------C----------A-------CA--GC-C----A
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         32189 43 -     32627 ACG---GTCAAACTAGACA----T-CCGCTCT-------GT-GACAGCAGT-------C----------A-------CA--GC-C----A
i Lepilemur_ruficaudatus.k141_420445                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      23332 43 +     54090 ACA---GTCAAACTAGACA----C-CCGCTCT-------GT-GACAGCAGT-------C----------A-------CA--GC-C----A
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3039667 28 +   3914936 GTA---ATCAAACTAGAAA----T-GCACTCA-------TT-T-------A---------------------------------------
i Leptonychotes_weddellii.KB714746.1                     C 0 I 16
s Lipotes_vexillifer.KE559953.1                             268251 43 -    662738 GTG---ATCAAATTAGAAG----C-CCAGTCA-------TT-T-------ACAGTATAC----------A-------CA--TA-C----C
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1432836 44 +   1826925 GTG---ATCAGACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AC-A----C
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            1862 43 +     11245 ATG---GTCAAACAAGACA----C-CCATTC--------TG-GACAGCAGC-------C----------A-------CA--TGCC----C
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1000699 43 +   6120653 ATG---GTCAAACAAGACA----C-CCATTC--------TG-GACAGCAGC-------C----------A-------CA--TGCC----C
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17952446 43 -  59628241 GTA---ATCAAACTAGAAA----C-CCACTCA-------TT-T-------ACAATAGAT----------A-------CA--CA-C----C
i Lycaon_pictus.CM007581.1                               C 0 I 3
s Macaca_arctoides.k141_2326796                               2657 44 +     40492 GTG---GTCAGACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AC-A----C
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59671912 44 +  60120075 GTG---GTCAGACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AC-A----C
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  8412 44 -     26193 GTG---GTCAGACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AC-A----C
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            76209 44 -    114318 GTG---GTCAGACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AC-A----C
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  1924 44 -     23192 GTG---GTCAGACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AC-A----C
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                11377 44 -     29190 GTG---GTCAGACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AC-A----C
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  19944 44 +     37952 GTG---GTCAGACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AC-A----C
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186835032 44 + 187317192 GTG---GTCAGACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AC-A----C
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25453595 44 -  25927173 GTG---GTCAGACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AC-A----C
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  75793 44 +     89720 GTG---GTCAGACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AC-A----C
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 2791 44 +     20474 GTG---GTCAGACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AC-A----C
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   2592 44 -     14993 GTG---GTCAGACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AC-A----C
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  325464 44 -    668171 GTG---GTCAGACTAGAAA----C-TCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AC-A----C
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                  895 44 -     24072 GTG---GTCAGACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AC-A----C
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               21531 44 -     45290 GTG---GTCAGACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AC-A----C
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88266 39 +     94391 GTG---GTTAAACTAGAAA----C-CCACTTG-------TT-T-------A-------T---AG--G--A-------CA--TA-C----C
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23933079 44 -  24302211 GTG---GTCAGACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AC-A----C
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               347256 44 +    752769 GTG---GTCAGACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AC-A----C
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              16342 43 +    737560 GTG---GTCAAACTAGAAA----C-TCATTCA-------CT-T-------ACAGTAGAC----------A-------CA--TA-c----c
i Manis_javanica.JSZB01003497.1                          C 0 I 332
s Manis_pentadactyla.KN006162.1                              47727 43 -    317179 gtG---GTCAAACTAGAAA----C-TCATTCA-------CT-T-------ACAGTAGAC----------A-------CA--TA-c----c
i Manis_pentadactyla.KN006162.1                          C 0 I 332
s Marmota_marmota.CZRN01000018.1                          33098149 42 -  40650429 AGG---TCAAATTTAGAAG----T-CCGCTTA-------TT-C-CAGTGCA-------C----------A-------CA--TA-C----C
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         7551 41 -    207569 GTA---GCCTGACCAGAAA----C-TCGCTCA-------TT-T-------A-------C---AGTAG--A-------CA--TA-C----C
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              7226 28 +     13704 GTA---CTCAAACTAGAAA----C-CCACTCA-------TT-T-------A---------------------------------------
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 16
s Mesocricetus_auratus.KB708134.1                         12178401 43 -  29670104 ATG---GTCAAACCAGAAG----C-CCATTTA-------TTTG-CCACAGA-------T----------A-------CA--AA-C----C
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3867 43 +     10310 GTG---ATCAAATTAGAAG----C-CCAATCA-------TT-T-------ACAGTAGAC----------A-------CA--TA-C----C
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18287813 43 -  93316391 ATG---GTTGAACTAGGCA----C-CCACCCC-------TT-GACAGCAGC-------C----------A-------CA--GT-C----A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_534055                           4830 37 -     28506 GTG---GTCAGACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A--------------------
i Miopithecus_ogouensis.k141_534055                      C 0 I 11
s Mirounga_angustirostris.MirAng_flattened_line_93702         2503 28 -      8324 GTA---ATCAAACTAGAAA----T-GCACTCA-------TT-T-------A---------------------------------------
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 16
s Mirza_zaza.k141_952172                                      5381 43 -     37649 ATG---GTTGAACTAGGCA----C-CCACCCC-------TT-GACAGCAGC-------C----------A-------TA--GC-C----A
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    27372 43 -    437263 GTG---ATCAAATTAGAAG----C-CCAATCA-------TT-T-------ACAGTAGAC----------A-------CA--TA-C----C
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138575 46 -    366855 GTG---GTCAAACTAGAAT----T-CTGCTCA-------TT-T-------A-------CTGTAGTAGAAA-------CA--TA-A----C
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   1302 43 +     82753 GTG---GAAACTTTAGAAA----C-TCATTCA-------TT-T-------CCAGTGGAC----------A-------CA--GG-C----C
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   32604 37 +     37127 GTA---ATCAAACTAGAAA----C-CTACTCA-------TT-T-------ACAGTAGAC----------A--------------------
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 9
s Muscardinus_avellanarius.MusAve_scaffold_82313              3057 42 +     14296 ATC---ATCCAAATAGAAG----T-TCATTCA-------CT-T-CAAGACA-------C----------A-------CA--TA-C----C
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               298416 28 -  14710649 GTA---CTCAAACTAGAAA----C-CCACTCA-------TT-T-------C---------------------------------------
i Mustela_putorius.JH418006.1                            C 0 I 17
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186779 43 +    196477 TTG---GTCAAATCAGAAA----C-CAGCTCA-------TT-C-------A-------C----------AGTAAACACA--TG-T----C
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.AXCS01343547.1                            318 43 +       996 ATG---GTCAGACCATAAG----C-CAATGTA-------TTTG-CCATATA-------C----------A-------CA--AG-C----T
i Nannospalax_galili.AXCS01343547.1                      C 0 C 0
s Nasalis_larvatus.k141_413338                               10830 44 +     21681 GTG---GTCAAACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AT-A----C
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5866328 43 +   7148211 GTG---ATCAAATTAGAAG----C-CCAATCA-------TT-T-------ACAGTAGAC----------G-------CA--TA-C----C
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    757107 47 +    783361 GTG---GTCTAACTAGAGA----C-CCACTCA-------TG-T-------A-------CAGTAGTAGAGA-------CA--TAAG----C
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146707 43 -   9404916 GTA---ATCAAACTAGAAA----C-CCACTCA-------TT-T-------ACAATAGAT----------A-------CA--CA-C----C
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 3
s Nycticebus_bengalensis.LG01                            102575682 43 - 196305487 ATG---GTCAAACAAGACA----C-CCACTC--------TG-GACAGCAGC-------C----------A-------CA--TGCC----T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             3368 43 +      8486 ATG---GTCAAACAAGACA----C-CCACTC--------TG-GACAGCAGC-------C----------A-------CA--TGCC----T
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105746109 43 + 199412804 ATG---GTCAAACAAGACA----C-CCACTC--------TG-GACAGCAGC-------C----------A-------CA--TGCC----T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                              503809 28 -   2017862 GTA---ATCAAACTAGAAA----C-CCACTCA-------TT-T-------G---------------------------------------
i Odobenus_rosmarus.KB229312.1                           C 0 I 16
s Okapia_johnstoni.LVCL01S0005463.1                          77135 43 -    150152 GTG---GTCACTTTAGAAA----C-TCATTCA-------TT-T-------TCAGTGGAC----------A-------CA--TG-C----C
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   17024 42 +     28053 ATG---GTTAAAC-AGCAG----T-CCACTTA-------TTTA-CCATAGC-------T----------A-------CA--AA-C----C
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    75169 43 +    102263 ATG---GTCAATCCAGAAG----C-CCATTTG-------TTTA-CCATAGA-------C----------A-------CA--AA-T----C
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2782251 43 -  10937097 GTG---ATCAAATTAGAAG----C-CCAATCA-------TT-T-------ACCGTAGAC----------A-------CA--TA-C----C
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       459461 43 -    559221 GTA---ATCAAACTAGAAA----C-CCACTCA-------TT-T-------ACAATAGAT----------A-------CA--CA-C----C
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 3
s Ovis_aries.CM001607.2                                   17586397 43 +  44047080 GTG---GTCGCTttagaaa----t-tcattca-------tt-t-------tcagtgGAC----------A-------CA--GG-C----C
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      174374 43 -    191736 GTG---GTCGCTTTAGAAA----T-TCATTCA-------TT-T-------TCAGTGGAC----------A-------CA--GG-C----C
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    39705 44 +     80009 GTG---GCCAAACTAGAAA----C-CAACTCA-------TT-TTCAGTAGC-------T----------A-------CAC-AG-A----C
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03001836.1                             25622 44 +     51860 GTG---GCCAAACTAGAAA----C-CAACTCA-------TT-TTCAGTAGC-------T----------A-------CAC-AG-A----C
i Pan_troglodytes.NBAG03001836.1                         I 298 I 145
s Panthera_onca.PanOnc_flattened_line_3271                  148376 47 +    230217 GTG---ATCAAACTAGAAACCAAC-CCACTCA-------TT-T-------CCAGTAGAC----------A-------CT--TA-G----C
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 3
s Panthera_pardus.KV860321.1                                261583 47 +  18783137 GTG---ATCAAACTAGAAACCAAC-CCACTCA-------TT-T-------CCAGTAGAC----------A-------CT--TA-G----C
i Panthera_pardus.KV860321.1                             C 0 I 3
s Panthera_tigris.KE722367.1                               4718220 47 -   8748460 GTG---ATCAAACTAGAAACCAAC-CCACTCA-------TT-T-------CCAGTAGAC----------A-------CT--TA-G----C
i Panthera_tigris.KE722367.1                             C 0 I 3
s Pantholops_hodgsonii.KE114653.1                          1265291 43 -   2937107 GTG---GTCACTttagaaa----t-tcattca-------tt-t-------tcagtgGAC----------G-------CA--GG-C----C
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183438865 44 + 183742232 GTG---GTCAGACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AC-A----C
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             2558 44 +     20448 GTG---GTCAGACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AC-A----C
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20559363 44 +  20919399 GTG---GTCAGACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AC-A----C
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   1301 44 +     41871 GTG---GTCAGACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AC-A----C
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     4587 44 +     27711 GTG---GTCAGACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AC-A----C
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  4666 44 +      9205 GTG---GTCAGACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AC-A----C
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9843 43 -     78924 GTA---GTCAAACTGGAAA----C-CTACTCA-------TT-T-------ACAGTAGAC----------A-------CT--AA-C----C
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 3
s Perodicticus_ibeanus.k141_855320                            5864 43 +     13100 ATG---GTCAAACAAGACA----C-CCACCC--------TG-GACAGCAGC-------C----------A-------CA--CGCC----C
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             4237 43 +     25941 ATG---CTCAAACAAGACA----C-CCACCC--------TG-GACAGCAGC-------C----------A-------CA--CGCC----C
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18187957 43 -  18517816 ACG---GTCAAACCAGAAG----C-CCATTTG-------TTTA-CCATAGA-------C----------A-------CA--AA-C----C
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               9290 43 +     63832 GTG---ATCAAATTAGAAG----C-CCAATCA-------TT-T-------ACAGTAGAC----------G-------CA--TA-C----C
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           39342 44 +     62158 ATG---GTCAAACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AC-A----C
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        34064 44 +     89929 ATG---GTCAAACGAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AC-A----C
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            35480 44 +     51399 ATG---GTCAAATGAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AC-A----C
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14291716 44 -  14605196 ATG---GTCAAACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AC-A----C
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           34996 43 +     35617 GTG---ATCAAATTAGAAG----C-CCAATCA-------TT-T-------ACAGTCAAC----------A-------CA--TA-C----C
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189126790 44 + 189387572 GTG---GTCAAACTAGAAA----T-CCACTCA-------TT-TTCAGTAGC-------T----------A-------TAT-AC-A----C
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9566396 44 +   9816681 GTG---GTCAAACTAGAAA----T-CCACTCA-------TT-TTCAGTAGC-------T----------A-------TAT-AC-A----C
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               68991 44 -     81375 GTG---GTCAAACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AT-A----C
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                               812 44 +     19060 GTG---GTCAAACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AT-A----C
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2593071 43 -   4620579 ATG---GTCAAACTAGGCA----C-CCACCCC-------CT-GACAGCAGC-------T----------A-------CA--GC-C----A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     987084 43 +   2598838 ATG---GTCAAACTAGACA----C-CCACCCC-------TT-GACAGCAGC-------C----------A-------CT--GC-C----A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          25373 43 +     38485 ATG---GTCAAACTAGACA----C-CCACCCC-------TT-GACAGCAGC-------C----------A-------CT--GC-C----A
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             1532 43 +      4256 ATG---GTCAAACTAGACA----T-CCACCCC-------TT-GACAGCAGC-------C----------A-------CT--GC-C----A
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22892 43 +     35766 ATG---GTCAAACTAGACA----C-CCACCCC-------TT-GACAGCAGC-------C----------A-------CT--GC-C----A
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           1075 43 -     24134 ATG---GTCAAACTAGACA----T-CCACCCC-------TT-GACAGCAGC-------C----------A-------CT--GC-C----A
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24887 43 -     67325 ATG---GTCAAACTAGACA----C-CCACCCC-------TT-GACAGCAGC-------C----------A-------CT--GC-C----A
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           1132 43 -      6182 ATG---GTCAAACTAGACA----C-TCACCCC-------TT-GACAGCAGC-------C----------A-------CT--GC-C----A
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            11964 46 -     21811 GCG---GTCAAGCTAGaaa----c-ccactca-------tt-t-------a-------ctgtagAAGAGA-------TA--TA-C----C
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         37426 28 +     42204 GTA---CTCAAACTAGAAA----C-CCACTCA-------TT-T-------A---------------------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 17
s Pteropus_alecto.KB030862.1                              22974447 39 +  28871421 GTG---GTCAAACTAGAAA----G-CCACTTG-------TT-C-------A-------T---AG--G--A-------CA--TA-C----C
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1357537 39 +   4952924 GTG---GTCAAACTAGAAA----G-CCACTTG-------TT-C-------A-------T---AG--G--A-------CA--TA-C----C
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20271502 47 -  38429054 GTG---ATCAAACTAGAAACCAAA-CCACTCA-------TT-T-------CCAGTAGAC----------A-------CT--TA-G----C
i Puma_concolor.QAVW01001104.1                           C 0 I 3
s Pygathrix_cinerea.k141_1153803                             10823 44 -     91421 GTG---GTCAAACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AT-A----C
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7604951 44 +   7812017 GTG---GTCAAACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AT-A----C
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10792 44 -     72585 GTG---GTCAAACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AT-A----C
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5874 43 +     55207 GTG---GTCACTTTAGAAA----C-TCATTCA-------TT-T-------TCAGTGGAC----------A-------CA--GG-C----C
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinopithecus_bieti.k119_217274                             2507 44 -     11128 GTG---GTCAAACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AT-A----T
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91231862 44 - 195417433 GTG---GTCAAACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AT-A----T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7667511 44 +   7961872 GTG---GTCAAACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AT-A----T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85448 39 -     96226 GTG---GTCAAACTAGAAA----C-CCACTTG-------TT-T-------A-------T---AG--G--A-------CA--TA-C----C
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    152077 36 -    313613 GTG---GTCAAAATAGAAA----C-AAACTCA-------TT-T-------A-------C----------A-------GT--AG-A----C
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          15335 44 -     19888 GTG---GTCAAACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AT-A----C
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      22537 44 +     39453 GTG---GTCAAACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AT-A----C
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            3063 44 +     27826 GTG---GTCAAACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AT-A----T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             2584 44 -     19483 GTG---GTCAAACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AT-A----C
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      2646 44 +      7198 GTG---GTCAAACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AT-A----C
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         10906 44 +     15514 GTG---GTCAAACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AT-A----C
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            188406 36 -    191337 GTG---GTGAAACTACAAA----C-TTACTCA-------TC-T-------A-------C----------A-------CA--TA-A----C
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13648589 45 -  18376816 TTGAGAATCAAACTGAAAA----C-C-ACTCACTTATAATA-G-------A-------T----------A-------CA--TA-C----C
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1948932 42 -   3870691 ATG---GTCAACCTAGAAG----C-CCACTCA-------TT-C-CAGTGCA-------C----------A-------CA--TA-C----C
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             27942 28 +     97271 GTC---CTCAAACTAGAAA----C-CCACTCA-------TT-T-------A---------------------------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 16
s Suricata_suricatta.SurSur_flattened_line_6629              15510 37 -    196729 GTA---ATCGAACTAGAAA----C-CTACTCA-------TT-T-------ACAGTAGAC----------A--------------------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 9
s Sus_scrofa.JH118708.1                                      32492 43 -     47482 ATG---GTCAAAGTAAAAA----T-CCACCCA-------TT-T-------ACAGTGGAC----------A-------CA--TA-C----C
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1089111 44 -   1523678 GTG---GTCAAACTAGAAA----T-CCACTTA-------TT-TTCAGTAGC-------T----------A-------TAT-AC-A----C
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 7547 41 +     41958 GGG---GTCAAACTAGAAA----C-CCACTCA-------TT-T-------A-------T---A--ACAGA-------CA--TA-C----C
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 70133 43 +    116680 TTG---GTCAAATCAGAAA----C-CAGCTCA-------TT-C-------A-------C----------AGTAAACACA--TG-T----C
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115953 43 -    156842 ATG---GTCAAACTAGAAA----A-CTATTCA-------TT-T-------ACTGTAGAC----------A-------CA--CA-C----C
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    384404 43 +    539355 GTG---GTCAAACTAGAAA----A-CCACTCA-------TT-T-------ACTGTAGAC----------A-------CA--CA-C----C
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               11368 44 +     70052 ACG----CCAGACTAGAAAC---T-CTGCTCA-------TT-GACGGTAGC-------C----------A-------CC-TAC-A----A
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               15673 44 +     25099 ACG----CCAGACTAGAAAC---T-CTGCTCA-------TT-GATGGTAGC-------C----------A-------CC-TAC-A----A
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186423909 44 + 186847797 GTG---GTCAGACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AC-A----C
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   2710 30 +      8208 TTT---GTCAAATTGGAAA----C-CAACTCA-------TT-T-------A-------C----------A--------------------
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 I 2
s Trachypithecus_auratus.k141_722599                          6637 44 -     20410 GTG---GTCAAACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AT-A----C
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    10833 44 +     15221 GTG---GTCAAACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AT-G----C
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        6738 44 +     19930 GTG---GTCAAACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AT-A----C
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       3168 44 -     19997 GTG---GTCAAACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AT-A----C
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            43287 44 -     60166 GTG---GTCAAACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AT-A----C
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        10760 44 -     27529 GTG---GTCAAACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AT-A----C
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     10700 44 -     18194 GTG---GTCAAACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AT-A----C
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           4435 44 -     21137 GTG---GTCAAACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AT-A----C
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    3138 44 -     10723 GTG---GTCAAACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AT-A----C
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         2290 44 +      9834 GTG---GTCAAACTAGAGA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AT-G----C
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        20608 44 +     32220 GTG---GTCAAACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AT-A----C
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5934705 44 +   6242583 GTG---GTCAAACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AT-G----C
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        3952 44 +     20839 GTG---GTCAAACTAGAAA----C-CCTCTCA-------TT-TTCAGTAGC-------T----------A-------CAA-AT-A----C
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                   1548 43 -      1748 GTG---GTCACTGTAGAGA----C-CCATTAA-------TT-T-------ACAGTGGAC----------A-------CA--TA-C----C
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 C 0
s Tupaia_chinensis.KB320699.1                              2151394 43 +   4065304 atg---gTCAAACAAGAAA----C-ACATTCA-------TT-TACAGTAAA-------C----------A-------TT--TA-C----C
i Tupaia_chinensis.KB320699.1                            I 268 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     4716 42 -     10553 ATG---GTCAAGCAAGAAA----C-ACATTCA-------TT-TACAATAAA-------C----------A-------TT--TA-C-----
i Tupaia_tana.TupTan_flattened_line_97126                I 292 C 0
s Tursiops_truncatus.MRVK01000835.1                       15738490 43 +  33153633 GTG---ATCAAATTAGAAG----C-CCAATCA-------TT-T-------ACAGTAGAA----------A-------CA--TA-C----C
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   52278 36 -     77625 GTT---ATCAAATTACAAA----C-CAACTCA-------TT-T-------A-------G----------A-------AT--TG-A----C
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4847671 28 -   5085361 GTA---ATCAAACTAGAAA----C-CCACTCA-------TT-T-------A---------------------------------------
i Ursus_maritimus.KK499267.1                             C 0 I 16
s Varecia_rubra.k141_590885                                   7753 42 +     50397 ATA---GTCAAACTAGGCA----C-CCACCCC--------T-GACAGCAGC-------C----------A-------CA--GC-C----A
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              7807 43 +     24756 ATG---GTCAAACTAGGCA----C-CCACCCC-------CT-GACAGCAGC-------C----------A-------CA--GC-C----A
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5369141 43 -   5488506 GTG---TTCAAATTAGAAA----C-CCACTCA-------TT-T-------A-------C----------AGCAGACTCA--TA-C----C
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  8121 43 -     43706 GTA---ATCAAACTAGAAA----C-CCACTCA-------TT-T-------ACAATAGAT----------A-------CA--CA-C----C
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 3
s Xerus_inauris.XerIna_scaffold_48378                        20445 42 -     24430 ATA---GTCAAAGTAGAGA----T-CCACTCA-------TT-C-CAGTACA-------C----------A-------CA--TA-C----C
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          2379 28 +     86975 GTA---ATCAAACTAGAAA----C-CCATTCA-------TT-T-------A---------------------------------------
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 16
s Zapus_hudsonius.ZapHud_scaffold_11398                      11407 39 +     63895 ATA---GTCAAACTAGA-A----C-TCACTCA-------TT-A-CAGTA---------A----------A-------TG--AA-C----C
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            12182 43 +     12536 GTG---ATCAAATTAGAAG----C-CCAATCA-------TT-T-------ACAGTAGAC----------A-------CA--TA-C----C
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Mus_spretus.CM004101.1                                  90748383 358 - 130317789 I
e Mus_musculus.chr8                                       87646309 357 - 129401213 I
e Mus_caroli.LT608237.1                                   84357336 358 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rattus_norvegicus.chr16                                 53566216 434 +  90668790 I
e Psammomys_obesus.NESX01036370.1                             5904 349 -     21651 I
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1359220  0 +   3988456 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11256644 174 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 28263 354 +    140813 I
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Galagoides_demidoff.k141_31856                              3354  0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 47011 110 +     63868 I
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66741 239 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       2397 81 +     62944 TA-------C-----CATGAA-GA-AA--TGA------GC-------TCGGGA--CAAATGACTA--------------------TA----AAC-CTT-G----GGtc-aaatagcaacaaagattctcttcttgaccaaact
s Acinonyx_jubatus.LLWD01001279.1                           824555 52 -   1699592 ---------T-----CATGGT-AA-AA--TGG------GC-------TCTGGC--CAAATATCCA--------------------TA----AAT-CTT-G----GATC-AAATAAG---------------------------
i Acinonyx_jubatus.LLWD01001279.1                        I 3 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507799 52 -  29979442 ---------T-----CATGGT-GA-AA--TGG------GC-------TCTGGT--CAAATGCCCA--------------------TA----AAT-CTT-G----GATC-AAATAAG---------------------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 16 C 0
s Ailurus_fulgens.LNAC01001112.1                             76582 52 -    347723 ---------T-----CATGGT-GA-AA--TGG------GC-------TCTGGT--CAAATGCCCA--------------------TA----AAT-CTT-G----GATC-AAATAAG---------------------------
i Ailurus_fulgens.LNAC01001112.1                         I 16 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     66074 57 -     89534 AC-T-----C-----TTTGAC-AG-AA--TGG------GC-------TCTGGG--AAAATGCCTG--------------------GA----TAC-CTG-G----GGTC-CAACAATGG-------------------------
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 25
s Allenopithecus_nigroviridis.k141_3361533                   10376 81 -     52922 GC-------C-----CATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAacaaaggttctcttcttgacccagct
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         10307 81 -     28001 GC-------C-----CATGAA-GA-AA--TGA------GC-------TCCGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAacaaaggttctcttcttgacccaact
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                           753 81 -     18505 GC-------C-----CATGAA-GA-AA--TGA------GC-------TCCGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAacaaagcttctcttcttgacccaact
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           1602 81 -     12518 GC-------C-----CATGAA-GA-AA--TGA------GC-------TCCGGA--TAAATAACTC--------------------TG----AAC-CTT-G----GGTC-AAATAACAacaaaggttctcttcttgacccaact
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          676141 51 -   2318259 AT------CC-----CCTGGT-GA-AA--TGG------GC-------TCTAGT--CAAATGCCCG--------------------TAA----AG-CTT-G----GATC-ATA-------------------------------
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             98624 51 -    100397 AT------CC-----CCTGGT-GT-CA--TGG------GC-------TCTAGT--CAAATGCCCT--------------------TC----AAC-CTT-G----GATC-ACA-------------------------------
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       8018 57 +     20879 AA------CC-----CATGAT-AA-AA--CAG------GC-------TCTGGC--CAAATGCCTG--------------------TG----ACC-CTG-G----GACT-GAATAAtga-------------------------
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 25
s Arctocebus_calabarensis.k141_288239                        15674 81 +     17124 AC-------C-----CAGGGT-AA-CA--TGG------GG-------GCTGGC--CCAGTACCTC--------------------CA----AAC-CACAG----G-TC-AAATCAtgacgaagactgtctccatgaccaaacc
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Avahi_laniger.k141_765380                                  50050 81 -     92717 AC-------C-----TGTAGT-GA-AA--TGG------GC-------TCTGGC--CAAGTGCCTA--------------------TA----AAC-CAT-G----GGAC-AAATAGtgagaaagattctctccttgaccaaacc
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              50679 81 +     85213 AC-------C-----TGTAGT-GA-AA--TGG------GC-------TCTGGC--CAAGTGCCTA--------------------TA----AAC-CAT-G----GGAC-AAATAGtgagaaagattctctccttgaccaaacc
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15192389 51 +  23207421 AT------CC-----CATGGG-GA-AA--TGG------GT-------TCTGGT--CAAATGCCCA--------------------TA----AAC-CTT-G----GATC-AAA-------------------------------
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2854 51 -     18090 AT------CC-----CATGGG-GA-AA--TGG------GT-------TCTGGT--CAAATGCCCA--------------------TA----AAC-CTT-G----GATC-AAA-------------------------------
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    27065 50 +     34529 AT------CC-----CCTGGT-GA-AA--TGG------GC-------TC-AGT--CAAATGCCCA--------------------TAA----AG-CTT-G----GATC-ATA-------------------------------
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    200120 51 -    288883 AT------CC-----CCTGGT-GA-AA--CAG------GC-------TCTAGT--CAAATGCCCA--------------------TAA----AC-CTC-G----GATC-ACA-------------------------------
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20273325 51 +  48749331 AT------CC-----CCTGGT-GA-AA--CAG------GC-------TCTAGT--CAAATGCCCA--------------------TAA----AC-CTC-G----GATC-ACA-------------------------------
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1125881 51 -   1948126 AT------CC-----CCTGGT-GA-AA--CAG------GC-------TCTAGT--CAAATGCCCA--------------------TAA----AC-CTC-G----GATC-ACA-------------------------------
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18083963 51 +  45695690 AT------CC-----CCTGGT-GA-AA--CAG------GC-------TCTAGT--CAAATGCCCA--------------------TAA----AC-CTC-G----GATC-ACA-------------------------------
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2819632 50 +   4408762 AT------CC-----CCTGGT-GA-AA--CGG------GC-------TCTAGC--CAAATGCCTG--------------------TA-----AC-CTC-G----GATC-ACA-------------------------------
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            9999694 55 -  17673402 AT------CC-----CATGGT-AC-AA--TGG------GC-------TCTGTC--CAACTGCCTG--------------------TA----AAC-TTT-G----GATC-CAGTTAg---------------------------
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2332158 55 -   7040546 AT------CC-----CATGGT-AC-AA--TGG------GC-------TCTGTC--CAACTGCCTG--------------------TA----AAC-TTT-G----GATC-CAGTTAg---------------------------
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  400434 55 -   1652518 AT------CC-----CATGGT-AC-AA--TGG------GC-------TCTGTC--CAACTGCCTG--------------------TA----AAC-TTT-G----GATC-CAGTTAg---------------------------
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17796544 52 -  60362399 ---------T-----CATGGT-GA-AA--TGG------GC-------TCTGGT--CAAATACCTA--------------------TA----AAT-CTT-G----GATC-AAATAAG---------------------------
i CanFam4.chr16                                          I 3 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182601 52 -    185531 ---------T-----CATGGT-GA-AA--TGG------GC-------TCTGGT--CAAATACCTA--------------------TA----AAT-CTT-G----GATC-AAATAAG---------------------------
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 3 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9031987 52 -   9314153 ---------T-----CATGGT-GA-AA--TGG------GC-------TCTGGT--CAAATACCTA--------------------TA----AAT-CTT-G----GATC-AAATAAG---------------------------
i Canis_lupus_dingo.QKWQ01000480.1                       I 3 C 0
s Canis_lupus_familiaris.chr16                            17956252 52 -  59632846 ---------T-----CATGGT-GA-AA--TGG------GC-------TCTGGT--CAAATACCTA--------------------TA----AAT-CTT-G----GATC-AAATAAG---------------------------
i Canis_lupus_familiaris.chr16                           I 3 C 0
s Canis_lupus_orion.HG994398.1                            18497552 52 +  63665305 ---------T-----CATGGT-GA-AA--TGG------GC-------TCTGGT--CAAATACCTA--------------------TA----AAT-CTT-G----GATC-AAATAAG---------------------------
i Canis_lupus_orion.HG994398.1                           I 3 C 0
s Capra_aegagrus.CM003241.1                               18830259 51 +  46296322 AT------CC-----CCTGGT-GA-AA--TGG------GC-------TCTAGT--CAAATGCCCG--------------------TAA----AG-CTT-G----GATC-ATA-------------------------------
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18060979 51 -  44709034 AT------CC-----CCTGGT-GA-AA--TGG------GC-------TCTAGT--CAAATGCCCG--------------------TAA----AG-CTT-G----GATC-ATA-------------------------------
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           141799 81 -    496798 TC-------C-----CATGGT-GA-AA--TGA------GC-------TCTGGC--TGAATGCCTG--------------------TA----AAC-CTT-G----GGTC-AAATACTGACAAAAATTATCTTCTCAATCAAACT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    134562 57 +    179628 ATA------C-----CGTGGT-AA-AA--TGG------GA-------TCTGAA--CAAATGCCTA--------------------TA----AAC-CTG-G----GATC-AAACAATGA-------------------------
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 15
s Catagonus_wagneri.CatWag_scaffold_2839                     90052 55 +    217609 AT------CC-----CTTGGC-GA-AA--GAG------GC-------CCTCAT--CAAATGCCCA--------------------TA----AAC-CCT-G----GATC-AAATTAG---------------------------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         5714 81 -      8605 TC-------C-----CATGGT-GA-AA--TGA------GC-------TCTGGC--TGAATGCCTA--------------------TA----AAC-CTT-G----GGTC-AAATAAtgacaaaaattatcttctcaatcaaact
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12228662 54 +  27778364 AC------CC-----TATGGG-GA-AA--TGG------GC-------TCTGGT--CAAGGCCCA---------------------TA----AAC-CTT-G----GATG-AAATAAG---------------------------
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          3380 54 -      3715 AC------CC-----TATGGG-GA-AA--TGG------GC-------TCTGGT--CAAGGCCCA---------------------TA----AAC-CTT-G----GATG-AAATAAG---------------------------
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4471335 81 +   4669795 AC-------C-----CATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAAtaacaacaaagattctcttcttgacccaact
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         9884 81 -     19203 GC-------C-----CATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAacaaagattctcttcttgacccaact
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           4305 81 +      8260 GC-------C-----CATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAacaaagattctcttcttgacccaact
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           4533 81 +     27781 GC-------C-----CATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAacaaagattctcttcttgacccaact
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         4685 77 -     20310 ----------------ATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAacaaaggttctcttcttgacccaact
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           7669 77 +     29689 ----------------ATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAacaaaggttctcttcttgacccaact
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            2105 77 +      9989 ----------------ATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAacaaaggttctcttcttgacccaact
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          10352 77 -     27936 ----------------ATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAacaaaggttctcttcttgacccaact
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                            10379 77 -     11289 ----------------ATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAacaaaggttctcttcttgacccaact
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38812751 77 +  39242232 ----------------ATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAacaaaggttctcttcttgacccaact
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21218450 77 -  21565898 ----------------ATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAacaaaggttctcttcttgacccaact
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       35569 77 -     53127 ----------------ATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAacaaaggttctcttcttgacccaact
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        2854 77 +      7159 ----------------ATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAacaaaggttctcttcttgacccaact
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       10372 77 -     27947 ----------------ATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAacaaaggttctcttcttgacccaact
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         10348 77 +     17596 ----------------ATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAacaaaggttctcttcttgacccaact
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         40849 77 -     41420 ----------------ATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAacaaagcttctcttcttgacccaact
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            5574 55 -      6351 ACA------C-----CATCAA-GA-AA--TGG------TC-------CCTGCC--CAAACCCTCA--------------------TG----AAC-CCT-C----AGTC-CATTGAG---------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       I 2 C 0
s Cheirogaleus_major.k141_333249                             17472 81 -     52598 AC-------C-----TGTGGT-GA-AC--TGG------GC-------TCTGGC--CAAGTCCCTG--------------------TA----AAC-CAT-G----GGTC-AAATAGtgacaaagattctctccttgaccaaacc
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12822 81 +     57038 AC-------C-----TGTGGC-AA-AA--TGG------GC-------TCTGGC--CAAGTCCCTG--------------------TA----AAC-CAT-G----GGTC-AAATAGtgacaaagattctctccttgaccaaacc
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chlorocebus_aethiops.ctg25                              18424310 77 -  18827391 ----------------ATGAA-GA-AA--TGA------GC-------TCCGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACCacaaaggttctcttcttgacccaact
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       10752 77 -     50209 ----------------ATGAA-GA-AA--TGA------GC-------TCCGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACCacaaaggttctcttcgtgacccaact
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135417756 77 + 135778131 ----------------ATGAA-GA-AA--TGA------GC-------TCCGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACCacaaaggttctcttcttgacccaact
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15902 55 +     19366 AT------CC-----TATCAT-GA-AA--TGG------TT-------CCTGCC--CAAATTCTCA--------------------TA----AAC-CTT-C----AGTC-AAATAAG---------------------------
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            171001 55 +    839153 AT------CC-----TATCAT-GA-AA--TGG------TT-------CCTGCC--CAAATTCTCA--------------------TA----AAC-CTT-C----CGTC-AAATAAG---------------------------
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1906274 81 +   2368649 GT-------C-----CATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATGACTC--------------------TA----AAC-CTT-G----GGTC-AAATAAcaacaaagattttcttcttgaCCCAACT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199945943 81 + 200372422 GT-------C-----CATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATGACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAacaaagattttcttcttgacccaact
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              32815 81 +     84244 GT-------C-----CATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATGACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAacaaagattttcttcttgacccaact
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17547062 61 -  53390261 ATATATAAAC-----CATGGT-GA-AA--TGG------AC-------ACTGAC--TTAATTCCTA--------------------CA----AGG-CTT-A----CATC-AAGTAAG---------------------------
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          11303 64 -     20389 AT------CC-----TATG---AA-GA--TGGACTTTGGT-C-----TCTGGT--CAAATGCCCA--------------------TA----AAC-CTT-GGTTGGATC-AAATTAG---------------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetulus_griseus.LT883664.1                           11664051 58 + 224834208 AT------CC-----TGCAG---AAAAAGTGA------GC-------TAAGGG--CAAAACTCTA--------------------TA----AAC-CTG-A----AGTC-AAATAAtgg-------------------------
i Cricetulus_griseus.LT883664.1                          C 0 I 19
s Crocidura_indochinensis.CroInd_scaffold_239572              2090 50 -      5012 AA------CC-----GATGGT-GA-AA--TGG------AC-------TC------CAATTTCCCT--------------------AA----ACT-T-G-C----CATC-CATAACT---------------------------
i Crocidura_indochinensis.CroInd_scaffold_239572         I 165 I 5
s Cryptoprocta_ferox.CryFer_flattened_line_16129             25717 52 -     87169 ---------T-----CATGGT-GA-AA--TGG------GC-------TCTAAT--CAAATGCCCA--------------------TA----AAT-CTT-G----GATC-AAGAAAG---------------------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 5 C 0
s Dasypus_novemcinctus.JH564415.1                            61882 55 +   2246927 AT------CC-----TATCAG-GA-AA--TGG------TC-------CTTGCC--CAAATTCTCA--------------------TG----TAC-CTT-C----ATTC-AAATGAG---------------------------
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12533654 42 -  12879189 AC-------C-----TGTGGT-GA-CA--CGG------GC-------TCTGGC--CAAGGGCCTG--------------------TA----CAC-CAT---------------------------------------------
i Daubentonia_madagascariensis.ctg71                     C 0 I 38
s Delphinapterus_leucas.KZ290073.1                        16812025 51 +  35494412 AT------CC-----CATGGT-GA-AA--TGG------GC-------TCTGGT--CAAATGCCCA--------------------TA----AAC-CTT-G----GATC-AAA-------------------------------
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  670515 54 +   1390856 AT------CC-----CATGGG-GA-AA--TGG------GC-------TCTGGT--CAAGGCCCA---------------------TG----AAC-CTT-G----GATG-AAATAAG---------------------------
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    3270 54 +    198055 AC------CC-----TATGGG-GA-AA--TGG------GC-------TCTGGT--CAAGGCCCA---------------------TA----AAC-TTT-G----GATG-AAATAAG---------------------------
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE759718.1                                   8216 54 +     11740 AT------CC-----TATG---GA-AA--TGG------GCT------TCTGAT--CAAATGCCTA--------------------TA----AAC-TTT-G----AATC-AAACTAG---------------------------
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       311296 51 +    607251 AT------CA-----CCTGGT-GA-AA--TGG------GC-------TCTAGT--CAAATGCCCA--------------------TA----AAC-CTT-G----AATC-ACA-------------------------------
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          12848 61 -    110024 at------ca-----tgtca---a-aaaggga------gc-------taaggt--caAAACTCTA--------------------TAAGCAAAC-CTA-A----AGTC-AAATGATGG-------------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 19
s Ellobius_talpinus.LOJH01123422.1                            3811 61 +      5358 AT------CA-----TGTGA---A-AAAGGGA------GC-------TAAGGT--CAAAACTCTA--------------------TAAGCAAAC-CTA-A----AGTC-AAATAATGG-------------------------
i Ellobius_talpinus.LOJH01123422.1                       C 0 I 19
s Enhydra_lutris.KZ291758.1                               16326563 52 -  41312741 ---------T-----CATGG-TGA-AA--TGG------GC-------TCTGGT--CAAATGCCCA--------------------TA----AAT-CTT-G----GATC-AAATAAG---------------------------
i Enhydra_lutris.KZ291758.1                              I 17 C 0
s Equus_asinus.JREZ01000139.1                              1280555 55 +   4378816 AT------CC-----CGTGGT-GA-AA--TGG------GC-------TCTGGT--CAAAGGCCCA--------------------TA----AAC-CTT-G----GGTG-AAATAAG---------------------------
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18528376 55 -  39960074 AT------CC-----CGTGGT-GA-AA--TGG------GC-------TCTGGT--CAAAGGCCCA--------------------TA----AAC-CTT-G----GGTG-AAATAAG---------------------------
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               30391 55 +    498745 AT------CC-----CGTGGT-GA-AA--TGG------GC-------TCTGGT--CAAAGGCCCA--------------------TA----AAC-CTT-G----GGTG-AAATAAG---------------------------
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21200949 81 -  21539334 GC-------C-----CATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAacaaaggttctcttcttgacccaact
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11701 51 +    133382 AT------CC-----CATGGT-GA-AA--TGG------GC-------TCTGGT--CAAATGCCCA--------------------TA----AAC-CTT-G----GATC-AAA-------------------------------
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             25638 51 -     44125 AT------CC-----CATGGT-GA-AA--TGG------GC-------TCTGGT--CAAATGCCCA--------------------TA----AAC-CTT-G----GATC-AAA-------------------------------
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Eulemur_albifrons.k141_342033                              10153 81 -     14127 AC-------C-----TGCGGG-GA-AA--TGG------GC-------TCTGGC--CAAGCACCTG--------------------TG----AAC-CAT-G----GGTC-AAATAAtgacaaagattctctccttgaccgcacc
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                2851 81 -     16928 AC-------C-----TGCGGG-GA-AA--TGG------GC-------TCTGGC--CAAGCGCCTG--------------------TG----AAC-CGT-G----GGTC-AAATAAtgacaaagattctctccttgaccgcacc
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              11884 81 -     25546 AC-------C-----TGCGGG-GA-AA--TGG------GC-------TCTGGC--CAAGCGCCTG--------------------TG----AAC-CGT-G----GGTC-AAATAAtgacaaagattctctccttgactgcacc
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             9069 81 +     26330 AT-------C-----TGCGGG-GA-AA--TGG------GC-------TCTGGC--CAAGCGCCTG--------------------TG----AAC-CAT-G----GGTC-AAATAAtgacaaagattctctccttgactgcacc
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 10326 81 +     23973 AC-------C-----TGCGGG-GA-AA--TGG------GC-------TCTGGC--CAAGCGTCTG--------------------TG----AAC-CGT-G----GGTC-AAATAAtgacaaagattctctccttgaccgcacc
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 9069 81 +     75513 AC-------C-----TGCGGG-GA-AA--TGG------GC-------TCTGGC--CAAGCGCCTG--------------------TG----AAC-CGT-G----GGTC-AAATAAtgacaaagattctctccttgactgcacc
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  7020 81 +     97555 AC-------C-----TGCGGG-GA-AA--TGG------GC-------TCTGGC--CAAGCCCCTG--------------------TG----AAC-CGT-G----GGTC-AAATAAtgacaaagattatctccttgaccgcacc
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                             9947 81 +     26496 AC-------C-----TGCGGG-GA-AA--TGG------GC-------TCTGGC--CAAGCGCCTG--------------------TG----AAC-CGT-G----GGTC-AAATAAtgacaaagattctctccttgaccacacc
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                   553 81 -     17153 AC-------C-----TGCGGG-GA-AA--TGG------GC-------TCTGGC--CAAGCGCCTG--------------------TG----AAC-CGT-G----GGTC-AAATAAtgacaaagattctctccttgaccgcacc
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              10132 81 +    111500 AC-------C-----TGCGGG-GA-AA--TGG------GC-------TCTGGC--CAAGCGCCTG--------------------TG----AAC-CGT-G----GGTC-AAATAAtgacaaagattctctccttgaccgcacc
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20234420 52 + 206538554 ---------T-----CATGGT-AA-AA--TGG------GC-------TCTGGC--CAAATATCCA--------------------TA----AAT-CTT-G----GATC-AAATAAG---------------------------
i Felis_catus.CM001381.2                                 I 3 C 0
s Felis_catus_fca126.CM031415.1                           20193265 52 + 205367284 ---------T-----CATGGT-AA-AA--TGG------GC-------TCTGGC--CAAATATCCA--------------------TA----AAT-CTT-G----GATC-AAATAAG---------------------------
i Felis_catus_fca126.CM031415.1                          I 3 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  6777 52 -     36744 ---------T-----CATGGT-AA-AA--TGG------GC-------TCTGGC--CAAATATCCA--------------------TA----AAT-CTT-G----GATC-AAATAAG---------------------------
i Felis_nigripes.FelNig_flattened_line_20823             I 3 C 0
s Galeopterus_variegatus.GalVar_scaffold_266699                365 57 +      2098 AC-T-----C-----CGTGGT-GA-TT--TGG------GC-------TCTGGG--TAAATGCCTA--------------------TA----AAC-CCT-C----GGCC-AAATAACAA-------------------------
i Galeopterus_variegatus.GalVar_scaffold_266699          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     609261 51 -    660261 AT------CC-----CCTGGT-GA-AA--TGG------GC-------TCTAGT--CAAATGCCTG--------------------TA----AAC-CTT-G----GATC-ACA-------------------------------
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            31079 56 +     49224 AT------CT-----CATGGC-AA-AA--AGG------GC-------TCTGGC---AAATACCTG--------------------TA----ACC-CTG-G----GGAT-GAATGAtga-------------------------
i Glis_glis.GliGli_scaffold_19807                        C 0 I 23
s Gorilla_beringei.k141_3596273                              11632 81 -     32273 TA-------C-----CATGAA-GA-AA--TGA------GC-------TCGGGA--CAAATGACTA--------------------TA----AAC-CTT-G----GGTC-AAATAGCAacaaagattctcttcttgaccaaact
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186333780 81 + 186649187 TA-------C-----CATGAA-GA-AA--TGA------GC-------TCGGGA--CAAATGACTA--------------------TA----AAC-CTT-G----GGTC-AAATAGCAacaaagattctcttcttgaccaaact
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   30799 57 +     78134 AT------CT-----CATGGC-AG-AA--AGG------GC-------TCTGGC--CAAATACTTG--------------------TA----ACC-CTG-G----GGTT-GAATGAtga-------------------------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 25
s Hapalemur_alaotrensis.k141_170648                           3217 81 -     19426 AC-------C-----TACAGG-GA-AA--TGG------GC-------TCTGGC--CGAGCACCTG--------------------TA----AAC-CGT-G----GGTC-AAATAAtgacaaagatactctccttgaccacact
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              8361 81 -     15286 AC-------C-----TACAGG-GA-AA--TGG------GC-------TCTGGC--CGAGCACCTG--------------------TA----AAC-CGT-G----GGTC-AAATAAtgacaaagatactctccttgaccacact
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                              9999 81 +     18253 AC-------C-----TACAGG-GA-AA--TGG------GC-------TCTGGC--CGAGCACCTG--------------------TA----AAC-CGT-G----GGTC-AAATAAtgacaaagatactctccttgaccacact
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         10102 81 -     41752 AC-------C-----TACGGG-GA-AA--TGG------GC-------TCTGGC--CGAGCACCTG--------------------TA----AAC-CGT-G----GGTC-AAATAAtgacaaagattctctccttgaccacacc
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                          9935 81 -     16460 AC-------C-----TACGGG-GA-AA--TGG------GC-------TCTGGC--CGAGCACCTG--------------------TA----AAC-CGT-G----GGTC-AAATAAtgacaaagatactctccttgaccacact
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               239543 52 +    327341 ---------T-----CATGTT-GA-AA--TGG------GC-------TCTAGT--CAAATGCACA--------------------TA----AAT-CTT-G----GATC-AAATAAG---------------------------
i Helogale_parvula.HelPar_flattened_line_2585            I 5 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18465 51 +     36099 AT------CC-----CCTGGT-GA-AA--TGG------GC-------TCTAGT--CAAATGCCCG--------------------TAA----AG-CTT-G----GATC-ATA-------------------------------
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       109079 43 +   1711038 AT------CC-----TATG---GA-AA--TGA------GCTCTAATCTCTGGT--CAAATGccca--------------------ta----g---------------------------------------------------
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 6
s Hipposideros_galeritus.HipGal_scaffold_29171               40515 43 +     43066 AT------CC-----TGTG---GA-AA--TGA------ACTCTAATCTCTGGT--CAAATGCCCa--------------------ta----g---------------------------------------------------
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 I 6
s Hoolock_leuconedys.ctg274                                    430524 81 +    630532 TC-------C-----CATGAA-GA-AA--TGA------GC-------TCTGGA--GAAATGACTA--------------------TA----AAC-CTT-G----GGTC-AAATAGCAacaaagattctcttcttgaccaaact
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  41705 52 +     55795 ---------T-----CATGGT-GA-AA--TGG------TC-------TTTAGT--CAAATGCTCA--------------------TA----AAT-CTC-G----GATG-AAATAAG---------------------------
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 3 C 0
s Hylobates_agilis.k141_307679                               13455 81 -     15490 TC-------C-----CATGAA-GA-AA--TGA------GC-------TCTGGA--GAAATGACTA--------------------TA----AAC-CTT-G----GGTC-AAATAGCAacaaagattctcttcttgaccaaact
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              55461 81 +     67168 TC-------C-----CATGAA-GA-AA--TGA------GC-------CCTGGA--GAAATGACTA--------------------TA----AAC-CTT-G----GGTC-AAATAGCAacaaagattctcttcttgaccaaact
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189539111 81 - 191637585 TC-------C-----CATGAA-GA-AA--TGA------GC-------TCTGGA--GAAATGACTA--------------------TA----AAC-CTT-G----GGTC-AAATAGCAacaaagattctcttcttgaccaaact
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3332004 81 -  11177569 TC-------C-----CATGAA-GA-AA--TGA------GC-------TCTGGA--GAAATGACTA--------------------TA----AAC-CTT-G----GGTC-AAATAGCAacaaagattctcttcttgaccaaact
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7515342 57 -   7955117 AT------CC-----AAAGGT-GA-AA--TGG------GC-------TCTGGC--CAAATGCCTA--------------------AA----ACC-CTG-G----GGTT-AAATAAtga-------------------------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 25
s Indri_indri.k141_3655594                                   18918 80 +     31101 AC-------C-----TGTGGT-GA-AA--TGG------GC-------TCTGGT--CGAGTGCCTG--------------------TA----AAC-CAT-G----G-TC-AAATAGtgacaaagattctctccttgaccaaacc
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               23242 51 +     23964 AT------CC-----CATGGT-GA-AA--TGG------GC-------TCTGGT--CAAATGCCCA--------------------TA----AAC-CTT-G----GATC-AAA-------------------------------
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8272427 58 -   9596543 AT-T-----C-----CTTGAC-AG-AA--TAG------GC-------ACTGGG--CAAATGCCTG--------------------TA----AAC-CTG-G----GGTCCCAAGAATGG-------------------------
i Jaculus_jaculus.JH725527.1                             C 0 I 25
s Kogia_breviceps.KogBre_flattened_line_192630                2599 51 -      3359 AT------CC-----CATGGT-GA-AA--TGG------GC-------TCTGAT--CAAATGCCCA--------------------TA----AAT-CTT-G----GATC-AAA-------------------------------
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lemur_catta.scaffold_24                                 15520462 81 -  30322482 AC-------C-----TACAGG-GA-AA--TGG------GC-------TCTGGC--CGAGCACCTG--------------------TA----AAC-CGT-G----GGTC-AAATAAtgacaaagattctctccttgaccacact
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          7373 81 -     23766 AC-------C-----TGTGCT-GA-AA--TCG------GC-------TCTGGC--CAAGTGCCTG--------------------TA----AAC-CGC-G----GGTC-AAATAAtgacaaagattctctccttgaccaaacc
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             25320 81 +     45836 AC-------C-----TATGCT-GA-AA--TCG------GC-------TCTGGC--CAAGTGCCTG--------------------TA----AAC-CGC-G----GGTC-AAATAAtgacaaagattctctccttgaccaaacc
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         32232 81 -     32627 AC-------C-----TGTGCT-GA-AA--TGG------GC-------TCTGGC--CAAGTGCCTG--------------------TA----AAC-CGC-G----GGTC-AAATAAtgacaaagattctctccttgaccaaacc
i Lepilemur_ruficaudatus.k141_420445                     C 0 I 39
s Lepilemur_septentrionalis.k141_185316                      23375 81 +     54090 AC-------C-----TGTGCT-GA-AA--TCG------GC-------TCTGGC--CAAGTGCCTG--------------------TA----AAC-TGC-G----GGTC-AAATAAtgacaaagattctctccttgaccaaacc
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3039711 52 +   3914936 ---------T-----CATGGT-GA-AA--TGG------GC-------TCTGGT--CAAATGCCCA--------------------GA----AAC-CTT-G----GATC-AAATAAG---------------------------
i Leptonychotes_weddellii.KB714746.1                     I 16 C 0
s Lipotes_vexillifer.KE559953.1                             268294 50 -    662738 AT------CC-----CATGGT-GA-AA--TGA------GC-------T-TGGT--CAAATGCCCA--------------------TA----AAC-CTT-G----GATT-AAA-------------------------------
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1432880 81 +   1826925 GC-------C-----CATAAA-GA-AA--TGA------GC-------TCTGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAacaaagattctcttcttgacccaact
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            1905 81 +     11245 AC-------C-----CAGGGT-AA-CG--TGG------GG-------GCTGGC--CCAGCACCTA--------------------TA----AAC-CACAG----G-TC-AAATCAtgacaaagactctcttcatgaccaaacc
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1000742 81 +   6120653 AC-------C-----CAGGGT-AA-CG--TGG------GG-------GCTGGC--CCAGCACCTA--------------------TA----AAC-CACAG----A-TC-AAATCAtgacaaagactctcttcatgaccaaacc
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17952492 52 -  59628241 ---------T-----CATGGT-GA-AA--TGG------GC-------TCTGGT--CAAATACCTA--------------------TA----AAT-CTT-G----GATC-AAATAAG---------------------------
i Lycaon_pictus.CM007581.1                               I 3 C 0
s Macaca_arctoides.k141_2326796                               2701 81 +     40492 AC-------C-----CATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAacaaaggttcttttcttgacccaact
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59671956 81 +  60120075 AC-------C-----CATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAacaaaggttcttttcttgacccaact
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  8456 81 -     26193 AC-------C-----CATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATGACAacaaaggttcttttcttgacccaact
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            76253 81 -    114318 AC-------C-----CATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAacaaaggttctcttcttgacccaact
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  1968 81 -     23192 AC-------C-----CATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAacaaaggttcttttcttgacccaact
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                11421 81 -     29190 AC-------A-----CATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAacaaaggttcttttcttgacccaact
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  19988 81 +     37952 AC-------C-----CATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAacaaaggttcttttcttgacccaact
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186835076 81 + 187317192 AC-------C-----CATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATAacaacaaaggttcttttcttgacccaact
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25453639 81 -  25927173 AC-------C-----CATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAACAAAGGTTCTTTTCTTGACCCAACT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  75837 81 +     89720 AC-------C-----CATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAacaaaggttcttttcttgacccaact
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 2835 81 +     20474 AC-------C-----CATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAacaaaggttcttttcttgacccaact
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   2636 81 -     14993 AC-------C-----CATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAacaaaggttcttttcttgacccaact
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  325508 81 -    668171 AC-------C-----CATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAacaaaggttcttttcttgacccaact
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                  939 81 -     24072 AC-------C-----CATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAacaaaggttcttttcttgacccaact
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               21575 81 -     45290 AC-------C-----CATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAacaaaggttcttttcttgacccaact
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88305 54 +     94391 AT------CC-----TATG---GA-AA--TGG------GCT------TCTGAT--CAAATGCCCA--------------------TA----AAC-TTT-G----AATC-AAATTAG---------------------------
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23933123 81 -  24302211 GC-------C-----CATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAacaaagattctcttcttgacccaact
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               347300 81 +    752769 GC-------C-----CATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAacaaagattctcttcttgacccaact
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              16717 55 +    737560 aT------CC-----CATGGG-GA-AA--TGG------GT-------TTTGGT--CAAGTGTCCA--------------------TA----AAC-CTT-G----GATC-AAATAAG---------------------------
i Manis_javanica.JSZB01003497.1                          I 332 C 0
s Manis_pentadactyla.KN006162.1                              48102 55 -    317179 aT------CT-----CATGGG-GA-AA--TGG------GT-------TCTGGT--CAAGTGTCTA--------------------TA----AAC-CTT-G----GATT-AAATAAG---------------------------
i Manis_pentadactyla.KN006162.1                          I 332 C 0
s Marmota_marmota.CZRN01000018.1                          33098191 57 -  40650429 AT------CC-----AAAGGT-GA-AA--TGG------GC-------TCTGGC--CAAATGCCTA--------------------AA----ACC-CTG-G----GGTT-AAATAAtga-------------------------
i Marmota_marmota.CZRN01000018.1                         C 0 I 25
s Megaderma_lyra.MegLyr_scaffold_4542                         7592 59 -    207569 GT------CC-----TATG---GA-AA--TGG-CTCTGGT-C-----TCTGGT--GAAATGCCCA--------------------TA----AAC-CTT-G----GCTC-AATTTAG---------------------------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              7270 52 +     13704 ---------T-----CATGGT-GA-AA--TGG------GC-------TCTGGT--CAAATACCCA--------------------TA----AAT-CTT-G----GATC-AAATAAG---------------------------
i Mellivora_capensis.MelCap_flattened_line_69365         I 16 C 0
s Mesocricetus_auratus.KB708134.1                         12178444 57 -  29670104 AT------CC-----TGCGG---A-AAAGTGA------GC-------TAAGGG--CAAAGTTTTA--------------------TA----AAC-CTG-A----AGAC-TAATAATCG-------------------------
i Mesocricetus_auratus.KB708134.1                        C 0 I 19
s Mesoplodon_bidens.MesBid_scaffold_108144                    3910 51 +     10310 AT------CC-----CATGGT-GA-AA--TGG------GC-------TCTGGT--CAAATGCCCA--------------------TA----AAC-CTT-G----GATC-AAA-------------------------------
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microcebus_murinus.CM007674.1                           18287856 76 -  93316391 AC-------C-----TGTGGT-GA-AA--TGG------GC-------TCTGG-------TCCCTG--------------------TA----AAC-CGT-G----GGTC-AAATAGTGACAAAGGTCCTCTCCTTGACCAAACC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_534055                           4878 77 -     28506 ----------------ATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAacaaaggttctcttcttgacccaact
i Miopithecus_ogouensis.k141_534055                      I 11 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         2547 52 -      8324 ---------T-----CATGGT-GA-AA--TGG------GC-------TCTGGT--CAAATGCCCA--------------------GA----AAC-CTT-G----GATC-AAATAAG---------------------------
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 16 C 0
s Mirza_zaza.k141_952172                                      5424 76 -     37649 AC-------C-----TGTGGT-GA-AA--TGG------GC-------TCTGG-------TCCCTG--------------------TA----AAC-CAT-G----GGTC-AAATAGtgacaaagatcctctctttgaccaaacc
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    27415 51 -    437263 AT------CC-----CATGGT-GA-AA--TGG------GC-------TCTGGT--CAAATGCCCA--------------------TA----AAC-CTT-G----GATC-AAA-------------------------------
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138621 55 -    366855 GT------CC-----TACAGT-GA-AA--TGG------GC-------TCTGGT--CAAATGCCTA--------------------TA----AAT-CTT-G----CATC-CAATTAG---------------------------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   1345 34 +     82753 AT------CC-----CCTGGT-GA-AA--TGG------GC-------TCTAGT--CAAATGCCC-------------------------------------------------------------------------------
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 13
s Mungos_mungo.MunMun_flattened_line_23663                   32650 52 +     37127 ---------T-----CATGTT-GA-AA--TGG------GC-------TCTAGT--CAAATGCCCA--------------------TA----AAT-CTT-G----GATC-AAATAAG---------------------------
i Mungos_mungo.MunMun_flattened_line_23663               I 9 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              3099 77 +     14296 AT-T-----T-----CATGGC-AA-AA--AGG------TC-------TCAGGC--CAAATACCTGAAGGTTGAATGACCCTCAGGTA----ACC-CTG-G----GGTT-AAATGAtga-------------------------
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 21
s Mustela_putorius.JH418006.1                               298461 44 -  14710649 -----------------------A-AA--TGG------GC-------TCTGGT--CAAATGCCCA--------------------TA----AAT-CTT-G----GATC-AAATAAG---------------------------
i Mustela_putorius.JH418006.1                            I 17 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186822 55 +    196477 AT------CC-----TATCAT-GA-AA--TAG------TC-------CCTGCC--CAAATTCTCA--------------------TA----AAC-CTT-C----AGTC-AAATAAG---------------------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.AXCS01343547.1                            361 55 +       996 AT------CCC-T--TGGAG---A-AG--TAT------GC-------TTTGAT--CAAAT--CTG--------------------TA----TAC-CTG-G----GGTC-AAATAAtgg-------------------------
i Nannospalax_galili.AXCS01343547.1                      C 0 I 24
s Nasalis_larvatus.k141_413338                               10874 81 +     21681 GC-------C-----CGTGAA-GA-AA--TGA------GC-------TTTGGA--TAAATGACTC--------------------TA----CAC-TTT-G----GGTC-AAATAACAacaaaggttctcttcttgacccaact
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5866371 51 +   7148211 AT------CC-----CATGGT-GA-AA--TGG------GC-------TCTGGT--CAAATGCCCA--------------------TA----AAC-CTT-G----GATC-AAA-------------------------------
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    757154 55 +    783361 AC------CC-----TACAGT-GA-AA--TGG------GC-------TCAGGT--GAAATGCCTA--------------------TA----AAT-CTT-G----GCTC-AAATTAG---------------------------
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146753 52 -   9404916 ---------T-----CATGGT-GA-AA--TGG------GC-------TCTGGT--CAAATACCCA--------------------TA----AAT-CGT-G----GATC-AAATAAG---------------------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 3 C 0
s Nycticebus_bengalensis.LG01                            102575725 81 - 196305487 AC-------T-----CAGGGT-AA-CA--TGG------GG-------GCTGGC--CCACCACCAA--------------------TA----AAC-CACAG----G-TC-AAATCAtgacgaagactctcttcatgaccaaacc
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             3411 81 +      8486 AC-------T-----CAGGGT-AA-CA--TGG------GG-------GCTGGC--CCACCACCAA--------------------TA----AAC-CACAG----G-TC-AAATCAtgacgaagactctcttcatgaccaaacc
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105746152 81 + 199412804 AC-------T-----CAGGGT-AA-CA--TGG------GG-------GCTGGC--CCACCACCAA--------------------TA----AAC-CACAG----A-TC-AAATCAtgacgaagactctcttcatgaccaaacc
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                              503853 52 -   2017862 ---------T-----AATGGT-GA-AA--TGG------GC-------TCTGGT--CAAATGCCCA--------------------TA----AAT-CTT-G----GATC-AAATAAG---------------------------
i Odobenus_rosmarus.KB229312.1                           I 16 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          77178 51 -    150152 AT------CC-----CCTGGT-GA-AA--TGG------GC-------TCTAGT--CAAATGCCCG--------------------TA----AAC-CTT-G----GATC-ACA-------------------------------
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   17066 59 +     28053 AT------CA-----TGTGA---A-AAAGTGA------GC-------TAAGGT--TAAAAC--TA--------------------TAAGCAAAC-CTA-A----AGTC-AAATAATGG-------------------------
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 19
s Onychomys_torridus.OnyTor_scaffold_2986                    75212 57 +    102263 AT------CT-----TGTAG---G-AAAGTGA------GC-------TAAGGT--CAAAACTCTA--------------------TA----AAC-ATA-A----AGTC-AAATAAAAG-------------------------
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 19
s Orcinus_orca.KB316932.1                                  2782294 51 -  10937097 AT------CC-----CATGAT-GA-AA--TGG------GC-------TCTGGT--CAAATGCCCA--------------------TA----AAC-CTT-G----GATC-AAA-------------------------------
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       459507 52 -    559221 ---------T-----TATGGT-GA-AA--TGG------GC-------TCTGGT--CAAATACCCA--------------------TA----AAT-CTT-G----GATC-AAATAAG---------------------------
i Otocyon_megalotis.JAEUCK010005147.1                    I 3 C 0
s Ovis_aries.CM001607.2                                   17586440 51 +  44047080 AT------CC-----CCTGGT-GA-AA--TGG------GC-------TCTAGT--CAAATGCCCG--------------------TAA----AG-CTT-G----GATC-ATA-------------------------------
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      174417 51 -    191736 AT------CC-----CCTGGT-GA-AA--TGG------GC-------TCTAGT--CAAATGCCCG--------------------TAA----AG-CTT-G----GATC-ATA-------------------------------
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    39749 81 +     80009 TA-------C-----CATGAA-GA-AA--TGA------GC-------TCGGGA--CAAATGACTA--------------------TA----AAC-CTT-G----GGTC-AAATAGCAACAAAGATTCTCTTCTTGACCAAACT
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189138642 81 + 189151597 TA-------C-----CATGAA-GA-AA--TGA------GC-------TCGGGA--CAAATGACTA--------------------TA----AAC-CTT-G----GGTC-AAATAGCAACAAAGATTCTCTTCTTGACCAAACT
i Pan_troglodytes.CM009242.2                             I 44 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  148426 52 +    230217 ---------T-----CATGGT-AA-AA--TGG------GC-------TCTGGC--CAAATACCCA--------------------TA----AAT-CTT-G----GATC-AAATAAG---------------------------
i Panthera_onca.PanOnc_flattened_line_3271               I 3 C 0
s Panthera_pardus.KV860321.1                                261633 52 +  18783137 ---------T-----CATGGT-AA-AA--TGG------GC-------TCTGGC--CAAATACCCA--------------------TA----AAT-CTT-G----GATC-AAATAAG---------------------------
i Panthera_pardus.KV860321.1                             I 3 C 0
s Panthera_tigris.KE722367.1                               4718270 52 -   8748460 ---------T-----CATGGT-AA-AA--TGG------GC-------TCTGGC--CAAATACCCA--------------------TA----AAT-CTT-G----GATC-AAATAAG---------------------------
i Panthera_tigris.KE722367.1                             I 3 C 0
s Pantholops_hodgsonii.KE114653.1                          1265334 51 -   2937107 AT------CC-----CCTGGT-GA-AA--TGG------GC-------TCTAGT--CAAATGCCCG--------------------TAA----AG-CTT-G----GATC-ATA-------------------------------
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183438909 81 + 183742232 AC-------C-----CATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATaacaacaaagattctcttcttgacccaact
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             2602 81 +     20448 AC-------C-----CATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAacaaagattctcttcttgacccaatt
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20559407 81 +  20919399 AC-------C-----CATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAacaaagattctcttcttgacccaact
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   1345 81 +     41871 AC-------C-----CATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAacaaagattctcttcttgacccaact
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     4631 81 +     27711 AC-------C-----CATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAacaaagattctcttcttgacccaact
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  4710 81 +      9205 AC-------C-----CATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAacaaagattctcttcttgacccaact
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9889 51 -     78924 ---------T-----TATGGT-GA-AA--TGG------GA-------TCTGGT--CAAATGCCCA--------------------TA----AAT-CTT-G----TATC-AAATA-G---------------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 3 C 0
s Perodicticus_ibeanus.k141_855320                            5907 81 +     13100 AC-------C-----CAGGGT-AA-CA--TGG------GA-------GCTGGC--CCAGCACCTA--------------------CA----AAC-CACAG----G-TC-AAATCAtgacgaagactctctccatgaccaaacc
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             4280 81 +     25941 AC-------C-----CAGGGT-AA-CA--TGG------GA-------GCTGGC--CCAGCACCTA--------------------CA----AAC-CACAG----G-TC-AAATCAtgacgaagactctctccatgaccaaacc
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18188000 43 -  18517816 AT------CC-----TATAG---A-AAAGTGA------GC-------TAAGGT--CAAAACTCTA--------------------TA----AAC-ATG---------------------------------------------
i Peromyscus_maniculatus.KI615324.1                      C 0 I 32
s Phocoena_phocoena.PhoPho_flattened_line_24159               9333 51 +     63832 AT------CC-----CATGGT-GA-AA--TGG------GC-------TCTGGT--CAAATGCCCA--------------------TA----AAC-CTT-G----GATC-AAA-------------------------------
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           39386 81 +     62158 GC-------C-----CATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATGACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAacaaagattttcttcttgacccaact
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        34108 81 +     89929 GC-------C-----CATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATGACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAacaaagattttcttcttgacccaact
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            35524 81 +     51399 GC-------C-----CATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATGACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACAacaaagattttcttcttgacccaact
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14291760 81 -  14605196 GA-------C-----CATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATGACTC--------------------TA----AAC-CTT-G----GGTC-AAATAACaacaaagattttcttcttgACCCAACT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           35039 51 +     35617 AT------CC-----CATGGT-GA-AA--TGG------GC-------TCTGGT--CAAATGCCCA--------------------TA----AAC-CTT-G----GATC-AAA-------------------------------
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189126834 81 + 189387572 TC-------C-----CATGAA-GA-AA--TGA------GC-------TCTGGA--GAAATGACTA--------------------TA----AAC-CTT-G----GGTC-AAatagcaacaaagattatcttcttgaccaaact
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9566440 81 +   9816681 TC-------C-----CATGAA-GA-AA--TGA------GC-------TCTGGA--GAAATGACTA--------------------TA----AAC-CTT-G----GGTC-AAATAGCAacaaagattatcttcttgaccaaact
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               69035 81 -     81375 GC-------C-----CATGAA-GA-AA--TGA------GC-------TTTGGA--TAAATGACTC--------------------TA----AAC-TTT-G----GGTC-AAATAACAacaaagattctcttcttgatccaact
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                               856 81 +     19060 GC-------C-----CATGAA-GA-AA--TGA------GC-------TTTGGA--TAAATGACTC--------------------TA----AAC-TTT-G----GGTC-AAATAACAacaaagattctcttcttgatccaact
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2593114 81 -   4620579 AC-------C-----TACGGG-GA-AA--TGG------GC-------TCTGGC--CAAGCACCTG--------------------TA----AAC-TGT-G----GGTC-AAATAAtgacaaagattctctccttgacCACACC
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     987127 81 +   2598838 AC-------C-----TATGGT-GA-AA--TGG------GC-------TCTGGC--CGAGTGCCTA--------------------TA----AAC-CAC-G----GGAC-AAATAGTGAGaaagattctctccttgaccaaagC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          25416 81 +     38485 AC-------C-----TATGGT-GA-AA--TGG------GC-------CCTGGC--CGAGTGCCTA--------------------TA----AAC-CAC-G----GGAC-AAATAGtgagaaagattctctccttgaccaaagc
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             1575 81 +      4256 AC-------C-----TGTGGT-GA-AA--TGG------GC-------TCTGGC--CGAGTGCCTA--------------------TA----AAC-CAC-G----GGAC-AAATAGtgagaaagattctctccttgaccaaacc
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          22935 81 +     35766 AC-------C-----TGTGGT-GA-AA--TGG------GC-------TCTGGC--CGAGTGCCTA--------------------TA----AAC-CAC-G----GGAC-AAATAGtgagaaagattctctccttgaccaaacc
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           1118 81 -     24134 AC-------C-----TGTGGT-GA-AA--TGG------GC-------TCTGGC--CGAGTGCCTA--------------------TA----AAC-CAC-G----GGAC-AAATAGtgagaaagattctctccttgaccaaacc
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        24930 81 -     67325 AC-------C-----TGTGGT-GA-AA--TGG------GC-------TCTGGC--CGAGTGCCTA--------------------TA----AAC-CAC-G----GGAC-AAATAGtgagaaagattctctccttgaccaaacc
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           1175 81 -      6182 AC-------C-----TATGGT-GA-AA--TGG------GC-------TCTGGC--CGAGTGCCTA--------------------TA----AAC-CAC-G----GGAC-AAATAGtgagaaagattctctccttgaccaaagc
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            12010 55 -     21811 AT------CC-----TACAGT-GA-AA--TGG------GT-------TCTGGT--CCAATGCCTA--------------------TA----AGT-CTT-G----CATC-AAATTAG---------------------------
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         37471 51 +     42204 ---------T-----CATGG--GA-AA--TGG------GC-------TCTGGT--CAAATGCCCA--------------------TA----AAT-CTT-G----GATC-AAATAAG---------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 17 C 0
s Pteropus_alecto.KB030862.1                              22974486 54 +  28871421 AT------CC-----TATG---GA-AA--TGG------GCT------TCTGAT--CAAATGCCCA--------------------TA----AAC-TTT-G----AATC-AAATTAG---------------------------
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1357576 54 +   4952924 AT------CC-----TATG---GA-AA--TGG------GCT------TCTGAT--CAAATGCCCA--------------------TA----AAC-TTT-G----AATC-AAATTAG---------------------------
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20271552 52 -  38429054 ---------T-----CATGGT-AA-AA--TGG------GC-------TCTGGC--CAAATATCCA--------------------TA----AAT-CTT-G----GATC-AAATAAG---------------------------
i Puma_concolor.QAVW01001104.1                           I 3 C 0
s Pygathrix_cinerea.k141_1153803                             10867 81 -     91421 GC-------C-----CATGAA-GA-AA--TGA------GC-------TTTGGA--TAAATGACTC--------------------TA----CAC-TTT-A----GGTC-AAATAACAacaaagattctcttcttgacccaact
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7604995 81 +   7812017 GC-------C-----CATGAA-GA-AA--TGA------GC-------TTTGGA--TAAATGACTC--------------------TA----CAC-TTT-G----GGTC-AAATAACAacaaagattctcttcttgacccaact
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10836 81 -     72585 GC-------C-----CATGAA-GA-AA--TGA------GC-------TTTGGA--TAAATGACTC--------------------TA----CAC-TTT-G----GGTC-AAATAACAacaaagattctcttcttgacccaact
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5917 51 +     55207 AT------CA-----CCTGGT-GA-AA--TGG------GC-------TCTAGT--CAAATGCCCG--------------------TA----AAC-CTT-G----AATC-ACA-------------------------------
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinopithecus_bieti.k119_217274                             2551 81 -     11128 GC-------C-----CATGAA-GA-AA--TGA------GC-------TTTGGA--TAAATGACTC--------------------TA----CAC-TTT-G----GGTC-AAATAACAacaaagattctcttcttgacccaact
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91231906 81 - 195417433 GC-------C-----CATGAA-GA-AA--TGA------GC-------TTTGGA--TAAATGACTC--------------------TA----CAC-TTT-G----GGTC-AAATAACAACAAAGATTCTCTTCTTGACCCAACT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7667555 81 +   7961872 GC-------C-----CATGAA-GA-AA--TGA------GC-------TTTGGA--TAAATGACTC--------------------TA----CAC-TTT-G----GGTC-AAATAACAacaaagattctcttcttgacccaact
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85487 54 -     96226 AT------CC-----TATG---GA-AA--CCG------GCT------TCTGAT--CAAATGCCCA--------------------TA----AAC-TTT-G----AATC-AAATTAG---------------------------
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    152113 61 -    313613 ACATACAACC-----CATGGT-GA-AA--TGC------AC-------TGTGAT--TGAATTCCTA--------------------TA----AGA-CTT-A----CATC-AAATAAG---------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          15379 81 -     19888 GC-------C-----CATGAA-GA-AA--TGA------GC-------TTTGGA--TAAATGACTC--------------------TA----AAC-TTT-G----GGTC-AAATAACAacaaagattctcttcttgacccaact
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      22581 81 +     39453 GC-------C-----CATGAA-GA-AA--TGA------GC-------TTTGGA--TAAATGACTC--------------------TA----AAC-TTT-G----GGTC-AAATAACAacaaagattctcttcttgacccaact
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            3107 81 +     27826 GC-------C-----CATGAA-GA-AA--TGA------GC-------TTTGGA--TAAATGACTC--------------------TA----AAC-TTT-G----GGTC-AAATAACAacaaagattctcttcttgacccaact
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             2628 81 -     19483 GC-------C-----CATGAA-GA-AA--TGA------GC-------TTTGGA--TAAATGACTC--------------------TA----AAC-TTT-G----GGTC-AAATAACAacaaagattctcttcttgacccaact
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      2690 81 +      7198 GC-------C-----CATGAA-GA-AA--TGA------GC-------TTTGGA--TAAATGACTC--------------------TA----AAC-TTT-G----GGTC-AAATAACAacaaagattctcttcttgacccaact
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         10950 81 +     15514 GA-------C-----CATGAA-GA-AA--TGA------GC-------TTTGGA--TAAATGACTC--------------------TA----AAC-TTT-G----GGTC-AAATAACAacaaagattctcttcttgacccaact
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            188442 55 -    191337 AT------CC-----CACAGT-GA-AA--TGG------GC-------TCTGGT--CAAGTTTCCA--------------------AA----ATC-ATG-G----GATC-AAATAAT---------------------------
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Sorex_araneus.JH798187.1                                13648634 55 -  18376816 AG-T-----CCCTGGCAAAAT-GA-AA--TGG------AC-------TCTGAT--CAAATTCTCA--------------------TA----CAT-TTA-G----ACTG-GA--------------------------------
i Sorex_araneus.JH798187.1                               C 0 I 801
s Spermophilus_dauricus.KZ294078.1                         1948974 57 -   3870691 AT------CC-----AAAGGT-GA-AA--TGG------GC-------TCTGGC--CAAATGCCTA--------------------AA----ACC-CTG-G----GGTT-AAATAAtga-------------------------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 25
s Spilogale_gracilis.SpiGra_flattened_line_13525             27986 52 +     97271 ---------T-----CAGGGT-GA-AA--TGG------GC-------TCTAGT--CAAATGCCCA--------------------TA----AAT-CTT-G----GATC-AAATAAG---------------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 16 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              15556 52 -    196729 ---------T-----CATGTT-GA-AA--TGG------GC-------TCTAGT--CAAATGCCCA--------------------TA----AAT-CTT-G----GATC-AAATAAG---------------------------
i Suricata_suricatta.SurSur_flattened_line_6629          I 9 C 0
s Sus_scrofa.JH118708.1                                      32535 55 -     47482 AT------CC-----CTTGGT-GA-AA--GGG------GT-------CCTCAT--CAAATGCCCA--------------------GA----AAC-CTT-G----GATC-AAATTAG---------------------------
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1089155 81 -   1523678 TC-------C-----CATGAA-GA-AA--TGA------GC-------TCTGGA--GAAATGACTA--------------------TA----AAC-CTT-G----GGTC-AAATAGCAacaaagattctcttcttgaccaaact
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 7588 55 +     41958 AC------CC-----TATAGT-CA-AA--TGG------AC-------TCTGGT--CAAATGCTTA--------------------TA----AAT-CTT-A----GATC-AAATTAG---------------------------
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 70176 55 +    116680 AT------CC-----TTCCAT-GA-AA--TGG------TC-------CCTGCC--CAAATTCTCA--------------------TA----AAC-TTT-C----AGTC-AAACAAG---------------------------
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      115996 55 -    156842 AT------CC-----CATGGT-GA-AA--TAG------GC-------TCTGGT--CAAGGGCCAG--------------------TA----AAC-CTT-G----GATG-AAATAAG---------------------------
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    384447 55 +    539355 AT------CC-----CATGGT-GA-AG--TGG------GC-------TCTGGT--CAAAGGCCCA--------------------TA----AAC-CTT-G----GATG-AAATATG---------------------------
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               11412 81 +     70052 TC-------C-----CATGGT-GA-AA--TGA------GC-------TCTGGC--CGAACGCCTG--------------------TA----AAC-CTT-G----GGTC-AAACAAtgacaaaacttatcttcttgatcaaact
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               15717 81 +     25099 TC-------C-----CATGGT-GA-AA--TGA------GC-------TCTGGC--CGAATGCCTG--------------------TA----AAC-CTT-G----GGTC-AAATAAtgacaaaacttatcttcttgatcaaact
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186423953 81 + 186847797 AC-------C-----CATGAA-GA-AA--TGA------GC-------TCTGGA--TAAATAACTC--------------------TA----AAC-CTT-G----GGTC-AAATaacaacaaagattctcttcttgacccaact
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   2742 55 +      8208 ACA------C-----TGTCAG-GA-AA--TGG------TC-------CCTGCC--CAAATTCTCA--------------------AG----AAC-CTT-C----AGTC-AAATGAG---------------------------
i Tolypeutes_matacus.TolMat_scaffold_228639              I 2 C 0
s Trachypithecus_auratus.k141_722599                          6681 81 -     20410 GC-------C-----CATGAA-GA-AA--TGA------GC-------TTTGGA--TAAATGACTC--------------------TA----AAC-TTT-G----GGTC-AAATAACAacaaagattctcttcttgacccaact
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    10877 81 +     15221 GC-------C-----CATGAA-GA-AA--TGA------GC-------TTTGGA--TAAATGACTC--------------------TA----AAC-TTT-G----GGTC-AAATAACAacaaagattctcttcttgacccaact
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        6782 81 +     19930 GC-------C-----CATGAA-GA-AA--TGA------GC-------TTTGGA--TAAATGACTC--------------------TA----AAC-TTT-G----GGTC-AAATAACAacaaagattctcttcttgacccaact
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       3212 81 -     19997 GC-------C-----CATGAA-GA-AA--TGA------GC-------TTTGGA--TAAATGACTC--------------------TA----AAC-TTT-G----GGTC-AAATAACAacaaagattctcttcttgacccaact
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            43331 81 -     60166 GC-------C-----CATGAA-GA-AA--TGA------GC-------TTTGGA--TAAATGACTC--------------------TA----AAC-TTT-G----GGTC-AAATAACAacaaagattctcttcttgacccaact
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        10804 79 -     27529 GC-------C-----CATGAA-GA-AA--TGA------GC-------TTTGGA--TAAATGACTC--------------------TA----AAC-TTT-G----GGTC-AAAtaacaac--agattctcttcttgacccaact
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     10744 81 -     18194 GC-------C-----CATGAA-GA-AA--TGA------GC-------TTTGGA--TAAATGACTC--------------------TA----AAC-TTT-G----GGTC-AAATAACAacaaagattctcttcttgacccaact
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           4479 81 -     21137 GC-------C-----CATGAA-GA-AA--TGA------GC-------TTTGGA--TAAATGACTC--------------------TA----AAC-TTT-G----GGTC-AAATAACAacaaagattctcttcttgacccaact
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    3182 81 -     10723 GC-------C-----CATGAA-GA-AA--TGA------GC-------TTTGGA--TAAATGACTC--------------------TA----AAC-TTT-G----GGTC-AAATAACAacaaagattctcttcttgacccaact
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         2334 81 +      9834 GC-------C-----CATGAA-GA-AA--TGA------GC-------TTTGGA--TAAATGACTC--------------------TA----AAC-TTT-G----GGTC-AAATAACAacaaagattctcttcttgacccaact
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        20652 81 +     32220 GC-------C-----CATGAA-GA-AA--TGA------GC-------TTTGGA--TAAATGACTC--------------------TA----AAC-TTT-G----GGTC-AAATAACAacaaagattctcttcttgacccaact
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5934749 81 +   6242583 GC-------C-----CATGAA-GA-AA--TGA------GC-------TTTGGA--TAAATGACTC--------------------TA----AAC-TTT-G----GGTC-AAATAACAacaaagattctcttcttgacccaact
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        3996 81 +     20839 GC-------C-----CATGAA-GA-AA--TGA------GC-------TTTGGA--TAAATGACTC--------------------TA----AAC-TTT-G----GGTC-AAATAACAacaaagattctcttcttgacccaact
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                   1591 50 -      1748 AT------CT-----TCTGAT-GA-AA--TGG------GC-------TCTGGT--CAAATGCC-A--------------------TA----AAC-TTT-G----GGTC-AAA-------------------------------
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 C 0
s Tupaia_chinensis.KB320699.1                              2151437 57 +   4065304 AT------CC-----CATGGT-GA-AA--TGG------AC-------TCTGAC--CAAATGCCTG--------------------TA----AAC-TTT-G----AGTC-TGATAGtga-------------------------
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     4758 54 -     10553 ---------C-----CATGGT-GA-AA--TGG------AC-------TCTGAC--CAAATGTCTG--------------------CA----AAC-CTT-G----AGTC-TAATAGtga-------------------------
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15738533 51 +  33153633 AT------CC-----CATGGT-GA-AA--TGG------GC-------TCTGGT--CAAATGCCCA--------------------TA----AAC-CTT-G----GATC-AAA-------------------------------
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   52314 60 -     77625 ATATGCCATC-----CATGGC-AA-AA--TAT------AT-------TCTGAT--TGAATTTC-A--------------------TA----AGC-CTT-A----CACC-AAATAAA---------------------------
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4847715 52 -   5085361 ---------T-----CATGGT-GA-AA--TGG------GC-------TCTGGT--CAAATGCCCA--------------------TA----AAT-CTT-G----GATC-AAATAAG---------------------------
i Ursus_maritimus.KK499267.1                             I 16 C 0
s Varecia_rubra.k141_590885                                   7795 81 +     50397 AC-------C-----TGCGGT-GA-CA--TGG------GC-------TCTGGC--CGAGTGCCTG--------------------TA----AAC-CGT-G----GGTC-AAATAAtgacaaagattctctccttgaccaaacc
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              7850 81 +     24756 AC-------C-----TGCGGT-GA-CA--TGG------GC-------TCTGGC--CGAGTGCCTG--------------------TA----AAC-CGT-G----GGTC-AAATAAtgacaaagattctctccttgaccaaacc
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5369184 55 -   5488506 AT------CC-----CATGGT-AC-AA--TGG------GC-------TCTGTC--CAACTGCCTG--------------------TA----AAC-TTT-G----GATC-CAGTTAg---------------------------
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  8167 52 -     43706 ---------T-----CATGGT-GA-AA--TGG------GC-------TCTGGT--CAAATACCCA--------------------TA----AAT-CTT-G----GATC-AAATAAG---------------------------
i Vulpes_lagopus.VulLag_flattened_line_30954             I 3 C 0
s Xerus_inauris.XerIna_scaffold_48378                        20487 57 -     24430 AT------CC-----CATGGT-GA-AA--TGG------GC-------TCTGGC--CAAATACCTA--------------------CA----ACC-CTG-A----GGCT-GAATAGtga-------------------------
i Xerus_inauris.XerIna_scaffold_48378                    C 0 I 25
s Zalophus_californianus.ZalCal_flattened_line_17732          2423 52 +     86975 ---------T-----AATGGT-GA-AA--TGG------GC-------TCTGGT--CAAATGCCCA--------------------TA----AAT-CTT-G----GATC-AAATAAG---------------------------
i Zalophus_californianus.ZalCal_flattened_line_17732     I 16 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      11446 57 +     63895 AT------CC-----TTTGGA-AA-AA--TGA------GC-------TCTGAGTTTAAATGCCTA--------------------TA----AAC-ATG-G----GGTT-CAATAAA---------------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            12225 51 +     12536 AT------CC-----CATGGT-GA-AA--TGG------GC-------TCTGGT--CAAATGCCCA--------------------TA----AAC-CTT-G----GATC-AAA-------------------------------
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Mus_spretus.CM004101.1                                  90748383 358 - 130317789 I
e Mus_musculus.chr8                                       87646309 357 - 129401213 I
e Mus_caroli.LT608237.1                                   84357336 358 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rattus_norvegicus.chr16                                 53566216 434 +  90668790 I
e Psammomys_obesus.NESX01036370.1                             5904 349 -     21651 I
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1359220  0 +   3988456 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11256644 174 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 28263 354 +    140813 I
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Galagoides_demidoff.k141_31856                              3354  0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 47011 110 +     63868 I
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     66741 239 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       2478 41 +     62944 c------------------------tagtcaggctcctctgagctactt-t-tt-caacaa-----------------ggtct-------------ca
s Allactaga_bullata.AllBul_scaffold_9566                     66156 54 -     89534 c------------------------tggtcaggctcctgtgagctactttt-t--caaccaa-tct-cca--tccttaggtct-------------tt
i Allactaga_bullata.AllBul_scaffold_9566                 I 25 C 0
s Allenopithecus_nigroviridis.k141_3361533                   10457 41 -     52922 c------------------------tagtcaggctcctctgagctactt-t-tt-gaacaa-----------------ggtct-------------ca
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         10388 41 -     28001 c------------------------tagtcaggctcctctgagctactt-t-tt-gaacaa-----------------ggtct-------------ca
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                           834 41 -     18505 c------------------------tagtcaggctcctctgagctactt-t-tt-gaacaa-----------------ggtct-------------ca
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           1683 41 -     12518 c------------------------tagtcaggctcctctgagctactt-t-tt-gaacaa-----------------ggtct-------------ca
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       8100 27 +     20879 c------------------------tagtcaggcttctttgtaccactt-t-a---------------------------------------------
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 25 I 19
s Arctocebus_calabarensis.k141_288239                        15755 40 +     17124 c------------------------taatctggttcctctgagctgcgt-t-t--caatca-----------------ggcct-------------ca
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Avahi_laniger.k141_765380                                  50131 40 -     92717 c------------------------tagtctgactcctctgagctgctt-t-t--caacca-----------------ggcct-------------cg
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              50760 40 +     85213 c------------------------tagtctgactcctctgagctgctt-t-t--caacca-----------------ggcct-------------cg
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Carlito_syrichta.NW_007259797.1                           141880 54 -    496798 C------------------------TAGTCGGACTCCTCTGGGCGACTT-T-T-TCCACGA-----------------GGTCTCTTCCGTAGGCCTTG
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    134634 27 +    179628 G------------------------TAGTCAAACCCCTCTGAGCTACTT-T-T---------------------------------------------
i Castor_canadensis.CasCan_scaffold_2074                 I 15 I 6
s Cephalopachus_bancanus.k141_2037105                         5795 54 -      8605 c------------------------tagtcggactcctctgggcgactt-t-t-tccacga-----------------ggtctcttccgtaggccttg
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4471416 41 +   4669795 c------------------------tagtcaggctcctctgagctactt-t-tt-caacaa-----------------ggtct-------------ca
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                         9965 41 -     19203 c------------------------tagtcaggctcctctgagctactt-t-tt-caacaa-----------------ggtct-------------ca
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           4386 41 +      8260 c------------------------tagtcaggctcctctcagctactt-t-tt-caacaa-----------------ggtct-------------ca
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           4614 41 +     27781 c------------------------tagtcaggctcctctgagctactt-t-tt-caacaa-----------------ggtct-------------ca
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         4762 41 -     20310 c------------------------tagtcaggctcctctgagctgctt-t-tt-gaacaa-----------------ggtct-------------ca
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           7746 41 +     29689 c------------------------tagtcaggctcctctgagctgctt-t-tt-gaacaa-----------------ggtct-------------ca
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            2182 41 +      9989 c------------------------tagtcaggctcctctcagctactt-t-tt-gaacaa-----------------ggtct-------------ca
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          10429 41 -     27936 c------------------------tagtcaggctcctctgagctactt-t-tt-gaacaa-----------------ggtct-------------ca
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                            10456 41 -     11289 c------------------------tagtcaggctcctctcagctactt-t-tt-gaacaa-----------------ggtct-------------ca
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38812828 41 +  39242232 c------------------------tagtcaggctcctctgagctgctt-t-tt-gaacaa-----------------ggtct-------------ca
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21218527 41 -  21565898 c------------------------tagtcaggctcctctcagctactt-t-tt-gaacaa-----------------ggtct-------------ca
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       35646 41 -     53127 c------------------------tagtcaggctcctctcagctactt-t-tt-gaacaa-----------------cgtct-------------ca
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        2931 41 +      7159 c------------------------tagtcaggctcctctgagctgctt-t-tt-gaacaa-----------------ggtct-------------ca
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       10449 41 -     27947 c------------------------tagtcaggctcctctcagctactt-t-tt-gaacaa-----------------ggtct-------------ca
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         10425 41 +     17596 c------------------------tagtcaggctcctctcagctactt-t-tt-gaacaa-----------------ggtct-------------ca
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         40926 41 -     41420 c------------------------tagtcaggctcctctcagctactt-t-tt-gaacaa-----------------ggtct-------------ca
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Cheirogaleus_major.k141_333249                             17553 40 -     52598 c------------------------tagtctggctcttctgagctgctt-t-t--caacca-----------------ggcct-------------ca
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12903 40 +     57038 c------------------------tagtctggctcctctgagctgctt-t-t--caacca-----------------ggcct-------------ca
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chlorocebus_aethiops.ctg25                              18424387 41 -  18827391 c------------------------tagtcaggctcctctgagctactt-t-tt-gaacaa-----------------ggtct-------------ca
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       10829 41 -     50209 c------------------------tagtcaggctcctctgagctactt-t-tt-gaacaa-----------------ggtct-------------ca
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135417833 41 + 135778131 c------------------------tagtcaggctcctctgagctactt-t-tt-gaacaa-----------------ggtct-------------ca
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1906355 41 +   2368649 C------------------------tagtcaggctcctctgagcTACTT-T-TT-CAACAA-----------------GGTCT-------------CA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199946024 41 + 200372422 c------------------------tagtcaggctcctctgagctactt-t-tt-caacaa-----------------ggtct-------------ca
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              32896 41 +     84244 c------------------------tagtcaggcttctctgagctactt-t-tt-caacaa-----------------ggtct-------------ca
i Colobus_polykomos.k141_906115                          C 0 C 0
s Cricetulus_griseus.LT883664.1                           11664128 54 + 224834208 c------------------------tactcaggttcttctaagttactt-ttt--caattaa-gcc-cca--tactagggact-------------tt
i Cricetulus_griseus.LT883664.1                          I 19 C 0
s Daubentonia_madagascariensis.ctg71                      12533734 40 -  12879189 c------------------------tggtctggctcctctgagctgctt-t-t--caaccc-----------------ggcct-------------gg
i Daubentonia_madagascariensis.ctg71                     I 38 C 0
s Ellobius_lutescens.LOEQ01008920.1                          12928 54 -    110024 C------------------------TATTAAGGTTCTTCTAAATAACTT-TTT--CAATGA-AGAC-CCA--TACTTGGGTCT-------------TT
i Ellobius_lutescens.LOEQ01008920.1                      I 19 I 2656
s Ellobius_talpinus.LOJH01123422.1                            3891 54 +      5358 C------------------------TATTAAGGTTCTTCTAAATAACTT-TTT--CAATGA-AAAC-CCA--TACTTGGGTCT-------------TT
i Ellobius_talpinus.LOJH01123422.1                       I 19 N 0
s Erythrocebus_patas.Contig38                             21201030 41 -  21539334 c------------------------tagtcaggctcctctgagctactt-t-tt-gaacaa-----------------ggtct-------------ca
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              10234 40 -     14127 c------------------------tagtctggctcctctgagctgctt-t-g--caacca-----------------ggcct-------------cg
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                2932 40 -     16928 c------------------------tagtctggctcctctgagctgctt-t-g--caacca-----------------ggcct-------------cg
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              11965 40 -     25546 c------------------------tagtctggctcctctgagctgctt-t-g--caacca-----------------ggcct-------------cg
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             9150 40 +     26330 c------------------------tagtctggctcctctgagctgctt-t-g--caacca-----------------ggcct-------------cg
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 10407 40 +     23973 c------------------------tagtctggctcctctgagctgctt-t-g--caacca-----------------ggcct-------------cg
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 9150 40 +     75513 c------------------------tagtctggctcctctgagctgctt-t-g--caacca-----------------ggcct-------------cg
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  7101 40 +     97555 c------------------------tagtctggctcctctgagctgctt-t-g--caacca-----------------ggcct-------------cg
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            10028 40 +     26496 c------------------------tagtctggttcctctgagctgctt-t-g--caaccg-----------------ggcct-------------cg
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                   634 40 -     17153 c------------------------tagtctggctcctctgagctgctt-t-g--caacca-----------------ggcct-------------cg
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              10213 40 +    111500 c------------------------tagtctggctcctctgagctgctt-t-g--caacca-----------------ggcct-------------tg
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_266699                422 54 +      2098 C------------------------tagactggcttctctgagcgactt-t-t--tcaactaagcc-ctg--tccttggacct-------------tg
i Galeopterus_variegatus.GalVar_scaffold_266699          C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            31158 53 +     49224 c------------------------tagtcaggctcctctgtgctactt-t-t--caaccaa-gctgcat--tc-ttgggtct-------------tg
i Glis_glis.GliGli_scaffold_19807                        I 23 C 0
s Gorilla_beringei.k141_3596273                              11713 41 -     32273 c------------------------tagtcaggctcctctgagctactt-t-tt-caacaa-----------------ggtct-------------ca
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186333861 41 + 186649187 c------------------------tagtcaggctcctctgagctactt-t-tt-caacaa-----------------ggtct-------------ca
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   30881 53 +     78134 c------------------------gagtcaggctcctctgtgctactt-t-t--ccactaa-tca-aca--tccttgggcct-------------tg
i Graphiurus_murinus.GraMur_scaffold_10447               I 25 C 0
s Hapalemur_alaotrensis.k141_170648                           3298 40 -     19426 c------------------------tagtctggctcctctgagctgctt-t-g--caaccg-----------------ggcct-------------cg
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              8442 40 -     15286 c------------------------tagtctggctcctctgagctgctt-t-g--caaccg-----------------ggcct-------------cg
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             10080 40 +     18253 c------------------------tagtctggctcctctgagctgctt-t-g--caaccg-----------------ggcct-------------cg
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         10183 40 -     41752 c------------------------tagtctggctcctctgagctgctt-t-g--caaccg-----------------ggcct-------------cg
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         10016 40 -     16460 c------------------------tagtctggctcctctgagctgctt-t-g--caaccg-----------------ggcct-------------cg
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Hoolock_leuconedys.ctg274                                    430605 41 +    630532 c------------------------tagtcagcctcctctgagctgcgt-t-tt-ctacaa-----------------ggtct-------------ca
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_307679                               13536 41 -     15490 c------------------------tagtcagcctcctctgagctgctt-t-tt-ctacga-----------------ggtct-------------ca
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              55542 41 +     67168 c------------------------tagtcagcctcctctgagctgctt-t-tt-ctacaa-----------------ggtct-------------ca
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189539192 41 - 191637585 c------------------------tagtcagcctcctctgagctgctt-t-tt-ctacaa-----------------ggtct-------------ca
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3332085 41 -  11177569 c------------------------tagtcagcctcctctgagctgctt-t-tt-ctacaa-----------------ggtct-------------ca
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7515424 27 -   7955117 g------------------------tagtcagacttccctgcgatactt-t-a---------------------------------------------
i Ictidomys_tridecemlineatus.JH393364.1                  I 25 I 19
s Indri_indri.k141_3655594                                   18998 40 +     31101 c------------------------tagtctaactcctctgagctgctt-t-t--caacca-----------------ggcct-------------cg
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8272510 54 -   9596543 a------------------------tggtcaggctcctgtgagctactttt-t--caaccaatttc-c-a--cccgtaggtct-------------tt
i Jaculus_jaculus.JH725527.1                             I 25 C 0
s Lemur_catta.scaffold_24                                 15520543 40 -  30322482 c------------------------tagtctggctcctctgagctgctt-t-g--caaccg-----------------ggcct-------------cg
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          7454 39 -     23766 c------------------------tagtctggctcctctgagccaggt-t-t--caacca-----------------gg-tt-------------cg
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             25401 39 +     45836 c------------------------tagtctggctcctctgagccaggt-t-t--caacca-----------------gg-tt-------------cg
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_582783                          1275 39 -      1589 c------------------------tagtctggctcctctgagctgctt-t-t--caacca-----------------gg-tt-------------ca
i Lepilemur_ruficaudatus.k141_582783                     I 159 I 4
s Lepilemur_septentrionalis.k141_185316                      23456 39 +     54090 c------------------------tagtctggctcctctgagccaggt-t-t--caacca-----------------gg-tt-------------cg
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Lophocebus_aterrimus.ctg367                              1432961 41 +   1826925 c------------------------tagtcaggctcctctgagctactt-t-tt-gaacaa-----------------ggtct-------------ca
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            1986 40 +     11245 c------------------------tagtctggctccgctgagctgcat-t-t--caacca-----------------ggcct-------------ca
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1000823 40 +   6120653 c------------------------tagtctggctccgctgagctgcat-t-t--caacca-----------------ggcct-------------ca
i Loris_tardigradus.ctg83                                C 0 C 0
s Macaca_arctoides.k141_2326796                               2782 41 +     40492 c------------------------tagtcaggctcctctgagctactt-t-tt-gaacaa-----------------ggtct-------------ca
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59672037 41 +  60120075 c------------------------tagtcaggctcctctgagctactt-t-tt-gaacaa-----------------ggtct-------------ca
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  8537 41 -     26193 c------------------------tagtcaggctcctctgagctactt-t-tt-gaacaa-----------------ggtct-------------ca
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            76334 41 -    114318 c------------------------tagtcaggctcctctgagctactt-t-tt-gaacaa-----------------ggtct-------------ca
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  2049 41 -     23192 c------------------------tagtcaggctcctctgagctactt-t-tt-gaacaa-----------------ggtct-------------ca
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                11502 41 -     29190 c------------------------tagtcaggctcctctgagctactt-t-tt-gaacaa-----------------ggtct-------------ca
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  20069 41 +     37952 c------------------------tagtcaggctcctctgagctactt-t-tt-gaacaa-----------------ggtct-------------ca
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186835157 41 + 187317192 c------------------------tagtcaggctcctctgagctactt-t-tt-gaacaa-----------------ggtct-------------ca
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25453720 41 -  25927173 C------------------------tagtcaggctcctctgagcTACTT-T-TT-GAACAA-----------------GGTCT-------------CA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  75918 41 +     89720 c------------------------tagtcaggctcctctgagctactt-t-tt-gaacaa-----------------ggtct-------------ca
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 2916 41 +     20474 c------------------------tagtcaggctcctctgagctactt-t-tt-gaacaa-----------------ggtct-------------ca
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   2717 41 -     14993 c------------------------tagtcaggctcctctgagctactt-t-tt-gaacaa-----------------ggtct-------------ca
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  325589 41 -    668171 c------------------------tagtcaggctcctctgagctactt-t-tt-gaacaa-----------------ggtct-------------ca
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 1020 41 -     24072 c------------------------tagtcaggctcctctgagctactt-t-tt-gaacaa-----------------ggtct-------------ca
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               21656 41 -     45290 c------------------------tagtcaggctcctctgagctactt-t-tt-gaacaa-----------------ggtct-------------ca
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23933204 41 -  24302211 c------------------------tagtcaggctcccctgagctactt-t-tt-caacaa-----------------ggtct-------------ca
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               347381 40 +    752769 c------------------------tagtcaggctccc-tgagctactt-t-tt-caacaa-----------------ggtct-------------ca
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33098273 27 -  40650429 g------------------------tagtcagacttccctatgctactt-t-a---------------------------------------------
i Marmota_marmota.CZRN01000018.1                         I 25 I 19
s Mesocricetus_auratus.KB708134.1                         12178520 54 -  29670104 c------------------------tactcaggttcttctaagtcactt-ttt--caattaaa-cc-tta--tatttgagact-------------tt
i Mesocricetus_auratus.KB708134.1                        I 19 C 0
s Microcebus_murinus.CM007674.1                           18287932 39 -  93316391 C------------------------TAGTCTGGCTCCTGTGAGCTGCTT-T-T--CAACCA-----------------GGT-T-------------CG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_534055                           4955 41 -     28506 c------------------------tagtcaggctcctctgagctactt-t-tt-gaacaa-----------------ggtct-------------ca
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirza_zaza.k141_952172                                      5500 39 -     37649 c------------------------tagtctggctcctgtgagctgctt-t-t--caacaa-----------------ggt-t-------------ag
i Mirza_zaza.k141_952172                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              3197 52 +     14296 -------------------------cagtcaggctcctctgtgctactt-t-t--ccaacaa-gc---tgcatccttgggcct-------------tg
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 21 C 0
s Nannospalax_galili.AXCS01343547.1                            440 54 +       996 c------------------------aagtcatgttcttctgagttactt-tat--caattaaa-cc-cta--tccttggtcct-------------tt
i Nannospalax_galili.AXCS01343547.1                      I 24 C 0
s Nasalis_larvatus.k141_413338                               10955 41 +     21681 c------------------------tagtcaggctcctctgagctactt-t-tt-caacaa-----------------gttct-------------ca
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nycticebus_bengalensis.LG01                            102575806 40 - 196305487 c------------------------tagtctggctcctctgagctgcac-t-t--tgacca-----------------ggcct-------------ca
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             3492 40 +      8486 c------------------------tagtctggctcctctgagctgcac-t-t--tgacca-----------------ggcct-------------ca
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105746233 40 + 199412804 c------------------------tagtctgtctcctctgagctgcac-t-t--tgacca-----------------ggcct-------------ca
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   17144 54 +     28053 C------------------------TATTAAGGTTCTTATAAATTACTT-TTT--CAATTA-AGAC-CCA--TACTTGGGACT-------------TT
i Ondatra_zibethicus.OndZib_scaffold_46174               I 19 I 2654
s Onychomys_torridus.OnyTor_scaffold_2986                    75288 54 +    102263 C------------------------TATTTTGGCTCTTCTAAATTACTT-TTT--CAATTA-AGCC-CCA--TACTTGAGCCT-------------TT
i Onychomys_torridus.OnyTor_scaffold_2986                I 19 C 0
s Pan_paniscus.KQ411613.1                                    39830 41 +     80009 C------------------------tagtcaggctcctctgagctACTT-T-TT-CAACAA-----------------GGTCT-------------CA
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189138723 41 + 189151597 C------------------------tagtcaggctcctctgagcTACTT-T-TT-CAACAA-----------------GGTCT-------------CA
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                183438990 41 + 183742232 c------------------------tagtcaggctcctctgagctactt-t-tt-gaacaa-----------------ggtct-------------ca
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             2683 41 +     20448 c------------------------tagtcaggctcctctgagctactt-t-tt-gaaaaa-----------------ggtct-------------ca
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20559488 41 +  20919399 c------------------------tagtcaggctcctctgagctactt-t-tt-gaacaa-----------------ggtct-------------ca
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   1426 41 +     41871 c------------------------tagtcaggctcctctgagctactt-t-tt-gaacaa-----------------ggtct-------------ca
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     4712 41 +     27711 c------------------------tagtcaggctcctctgagctactt-t-tt-gaacaa-----------------ggtct-------------ca
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  4791 41 +      9205 c------------------------tagtcaggctcctctgagctactt-t-tt-gaacaa-----------------ggtct-------------ca
i Papio_ursinus.k141_3428135                             C 0 C 0
s Perodicticus_ibeanus.k141_855320                            5988 40 +     13100 c------------------------taatctggctcctctgagctgtgt-t-t--caatca-----------------ggctt-------------ca
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             4361 40 +     25941 c------------------------taatctgtctcctctgagctgcgt-t-t--caatca-----------------ggcct-------------ca
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18188075 54 -  18517816 c------------------------tatttcgattcttctaaattattt-ttt--caattaa-gcc-aca--tacttgggcct-------------tt
i Peromyscus_maniculatus.KI615324.1                      I 32 C 0
s Piliocolobus_badius.k141_1234363                           39467 41 +     62158 c------------------------tagtcaggctcctctgagctactt-c-tt-caacaa-----------------ggtct-------------ca
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        34189 41 +     89929 c------------------------tagtcaggctcctctgagctactt-t-tt-caacaa-----------------ggtct-------------ca
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            35605 41 +     51399 c------------------------tagtcaggctcctctgagctactt-t-tt-caacaa-----------------ggtct-------------ca
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14291841 41 -  14605196 C------------------------TAGTCAGGCTCCTCTGAGCTACTT-C-TT-CAACAA-----------------GGTCT-------------CA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189126915 41 + 189387572 c------------------------tagtcaggctcctctgagctactt-t-tt-ctacag-----------------ggtct-------------ca
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9566521 41 +   9816681 c------------------------tagtcaggctcctctgagctactt-t-tt-ctacag-----------------ggtct-------------ca
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               69116 41 -     81375 c------------------------tagtcaggctcctctgagctactt-t-tt-caacaa-----------------gttct-------------ca
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                               937 41 +     19060 c------------------------tagtcaggctcctctgagctattt-t-tt-caacaa-----------------gttct-------------ca
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2593195 40 -   4620579 C------------------------TAGTCTGGCTCCTCTGAGCTGCTT-T-G--CAACCA-----------------GGACT-------------CG
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     987208 40 +   2598838 C------------------------TAGTCTGACTCCTCTGAGCTGCTT-T-T--CAACCA-----------------GGCCT-------------CG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          25497 40 +     38485 c------------------------tagtctgactcctctgagctgctt-t-t--caacca-----------------ggcct-------------cg
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             1656 40 +      4256 c------------------------tagtctgactcctctgagctgctt-t-t--caacca-----------------ggcct-------------cg
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          23016 40 +     35766 c------------------------tagtctgactcctctgagctgctt-t-t--caacca-----------------ggcct-------------cg
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           1199 40 -     24134 c------------------------tagtctgactcctctgagctgctt-t-t--caacca-----------------ggcct-------------cg
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        25011 40 -     67325 c------------------------tagtctgactcctctgagctgctt-t-t--caacca-----------------ggcct-------------cg
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           1256 40 -      6182 c------------------------tagtctgactcctctgagctgctt-t-t--caacca-----------------ggcct-------------cg
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pygathrix_cinerea.k141_1153803                             10948 41 -     91421 c------------------------tagtcaggctcctctgagctactt-t-tt-caacaa-----------------gttct-------------ca
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7605076 41 +   7812017 c------------------------tagtcaggctcctctgagctactt-t-tt-caacaa-----------------gttct-------------ca
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10917 41 -     72585 c------------------------tagtcaggctcctctgagctactt-t-tt-caacaa-----------------gttct-------------ca
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             2632 41 -     11128 c------------------------tagtcaggctcctctgagctactt-t-tt-caacaa-----------------gttct-------------ca
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91231987 41 - 195417433 C------------------------tagtcaggctcctctgagcTACTT-T-TT-CAACAA-----------------GTTCT-------------CA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7667636 41 +   7961872 c------------------------tagtcaggctcctctgagctactt-t-tt-caacaa-----------------gttct-------------ca
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Semnopithecus_entellus.k141_11662                          15460 41 -     19888 c------------------------tagtcagggtcctctgagctactt-t-tt-caacaa-----------------gttct-------------ca
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      22662 41 +     39453 c------------------------tagtcagggtcctctgagctactt-t-tt-caacaa-----------------gttct-------------ca
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            3188 41 +     27826 c------------------------tagtcagggtcctctgagctactt-t-tt-caacaa-----------------gttct-------------ca
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             2709 41 -     19483 c------------------------tagtcagggtcctctgagctactt-t-tt-caacaa-----------------gttct-------------ca
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      2771 41 +      7198 c------------------------tagtcagggtcctctgagctactt-t-tt-caacaa-----------------gttct-------------ca
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         11031 41 +     15514 c------------------------tagtcagggtcctctgagctactt-t-tt-caacaa-----------------gttct-------------ca
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1949056 27 -   3870691 g------------------------tagtcagacttccctgtgctactt-t-a---------------------------------------------
i Spermophilus_dauricus.KZ294078.1                       I 25 I 19
s Symphalangus_syndactylus.tarseq_199                      1089236 41 -   1523678 c------------------------tagtcagcctcctctgagctgctt-t-tt-ctacaa-----------------ggtct-------------ca
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_2201908                               11493 54 +     70052 c------------------------tagtcagactcctctgggtgactt-t-t-tccacta-----------------ggtctcttcttcaggccttg
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               15798 54 +     25099 c------------------------tagtcagactcctctgggtgactt-t-t-tccacta-----------------ggtctcttctttaggccttg
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186424034 41 + 186847797 c------------------------tagtcaggctcctctgagctactt-t-tt-gaacaa-----------------ggtct-------------ca
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          6762 41 -     20410 c------------------------tagtcagggtcctctgagctgctt-t-tt-caacaa-----------------gttct-------------ca
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    10958 41 +     15221 c------------------------tagtcagggtcccctgagctgctt-t-tt-caacaa-----------------gttct-------------ca
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        6863 41 +     19930 c------------------------tagtcagggtcctctgagctgctt-t-tt-caacaa-----------------gttct-------------ca
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       3293 41 -     19997 c------------------------tagtcagggtcctctgagctactt-t-tt-caacaa-----------------gttct-------------ca
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            43412 41 -     60166 c------------------------tagtcagggtcctctgagctactt-t-tt-caacaa-----------------gttct-------------ca
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        10883 41 -     27529 c------------------------tagtcagggtcctctgagctgctt-t-tt-caacaa-----------------gttct-------------ca
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     10825 41 -     18194 c------------------------tagtcagggtcctctgagctactt-t-tt-caacaa-----------------gttct-------------ca
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           4560 41 -     21137 c------------------------tagtcagggtcctctgagctactt-t-tt-caacaa-----------------gttct-------------ca
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    3263 41 -     10723 c------------------------tagtcagggtcctctgagctactt-t-tt-caacaa-----------------gttct-------------ca
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         2415 41 +      9834 c------------------------tagtcagggtcctctgagctgctt-t-tt-caacaa-----------------gttct-------------ca
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        20733 41 +     32220 c------------------------tagtcagggtcctctgagctactt-t-tt-caacaa-----------------gttct-------------ca
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5934830 41 +   6242583 c------------------------tagtcagggtcccctgagctgctt-t-tt-caacaa-----------------gttct-------------ca
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        4077 41 +     20839 c------------------------tagtcagggtcctctgagctactt-t-tt-caacaa-----------------gttct-------------ca
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2151494 77 +   4065304 caaggtctctctccttgacaaactctagcca-gctccccttagctactt-t-t--tcaactaggcc--tca-tccttaggcct-------------tc
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     4812 75 -     10553 caaagtctctctccttgacaaactccagcca-gctcccctta--tactt-t-t--tcaactaggcc--tca-tccttaggcct-------------tc
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Varecia_rubra.k141_590885                                   7876 40 +     50397 c------------------------tagtctggctcctctgagctgctt-t-g--caaccg-----------------ggcct-------------cg
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              7931 40 +     24756 c------------------------tagtctggctcctctgagctgctt-t-g--cagccg-----------------ggcct-------------cg
i Varecia_variegata.k141_1128296                         C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        20569 27 -     24430 g------------------------tagtcagacttctcagtgctactt-t-a---------------------------------------------
i Xerus_inauris.XerIna_scaffold_48378                    I 25 I 19
s Zapus_hudsonius.ZapHud_scaffold_11398                      11503 53 +     63895 A------------------------TGgtcaggctcctctgagctactt-t-t--cagccaa-gct-cca--tccttaggtct-------------tt
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Mus_spretus.CM004101.1                                  90748383 358 - 130317789 I
e Mus_musculus.chr8                                       87646309 357 - 129401213 I
e Mus_caroli.LT608237.1                                   84357336 358 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zalophus_californianus.ZalCal_flattened_line_17732          2475  0 +     86975 C
e Vulpes_lagopus.VulLag_flattened_line_30954                  8219  0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5369239  0 -   5488506 C
e Ursus_maritimus.KK499267.1                               4847767  0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   52374  0 -     77625 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   2797  0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    384502  0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      116051  0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 70231  0 +    116680 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                 7643  0 +     41958 C
e Sus_scrofa.JH118708.1                                      32590  0 -     47482 C
e Suricata_suricatta.SurSur_flattened_line_6629              15608  0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             28038  0 +     97271 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_5840            188497  0 -    191337 C
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152174  0 -    313613 C
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                85541  0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rattus_norvegicus.chr16                                 53566216 434 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20271604  0 -  38429054 C
e Pteropus_vampyrus.KN525825.1                             1357630  0 +   4952924 C
e Pteropus_alecto.KB030862.1                              22974540  0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         37522  0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            12065  0 -     21811 C
e Psammomys_obesus.NESX01036370.1                             5904 349 -     21651 I
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9940  0 -     78924 C
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Panthera_tigris.KE722367.1                               4718322  0 -   8748460 C
e Panthera_pardus.KV860321.1                                261685  0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  148478  0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       459559  0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              503905  0 -   2017862 C
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1359220  0 +   3988456 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9146805  0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    757209  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186877  0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               298505  0 -  14710649 C
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   32702  0 +     37127 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 138676  0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         2599  0 -      8324 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11256644 174 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Meriones_unguiculatus.MerUng_scaffold_7390                 28263 354 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365              7322  0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                         7651  0 -    207569 C
e Manis_pentadactyla.KN006162.1                              48157  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              16772  0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 88359  0 +     94391 C
e Lycaon_pictus.CM007581.1                                17952544  0 -  59628241 C
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3039763  0 +   3914936 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  41757  0 +     55795 C
e Hipposideros_galeritus.HipGal_scaffold_29171               40558  6 +     43066 I
e Hipposideros_armiger.JXIK01000431.1                       109122  6 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               239595  0 +    327341 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Galagoides_demidoff.k141_31856                              3354  0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  6829  0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20193317  0 + 205367284 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Equus_przewalskii.KK951119.1                               30446  0 +    498745 C
e Equus_caballus.CM000403.2                               18528431  0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1280610  0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16326615  0 -  41312741 C
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Eidolon_helvum.KE759718.1                                   8270  0 +     11740 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    3324  0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  670569  0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            61937  0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             25769  0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_239572              2140  5 -      5012 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 47011 110 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          11367  0 -     20389 C
e Condylura_cristata.JH655891.1                           17547123  0 -  53390261 C
e Choloepus_hoffmanni.KN194906.1                            171056  0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15957  0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            5629  0 -      6351 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_247804          3434  0 -      3715 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     90107  0 +    217609 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18497604  0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17956304  0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9032039  0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    182653  0 -    185531 C
e CanFam4.chr16                                           17796596  0 -  60362399 C
e Camelus_ferus.KB017975.1                                  400489  0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2332213  0 -   7040546 C
e Camelus_bactrianus.KN276810.1                            9999749  0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Ailurus_fulgens.LNAC01001112.1                             76634  0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9507851  0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     66741 239 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           824607  0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       2519 3 +     62944 tcc
s Allactaga_bullata.AllBul_scaffold_9566                     66210 3 -     89534 tcc
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   10498 3 -     52922 tcc
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         10429 3 -     28001 tcc
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                           875 3 -     18505 tcc
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           1724 3 -     12518 tcc
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       8146 1 +     20879 t--
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 19 C 0
s Arctocebus_calabarensis.k141_288239                        15795 3 +     17124 tgc
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Avahi_laniger.k141_765380                                  50171 3 -     92717 ccc
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              50800 3 +     85213 ccc
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Carlito_syrichta.NW_007259797.1                           141934 3 -    496798 TCC
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    134667 3 +    179628 TCC
i Castor_canadensis.CasCan_scaffold_2074                 I 6 C 0
s Cephalopachus_bancanus.k141_2037105                         5849 3 -      8605 tcc
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4471457 3 +   4669795 tcc
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        10006 3 -     19203 tcc
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           4427 3 +      8260 tcc
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           4655 3 +     27781 tcc
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         4803 3 -     20310 tcc
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           7787 3 +     29689 tcc
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            2223 3 +      9989 tcc
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          10470 3 -     27936 tct
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                            10497 3 -     11289 tcc
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38812869 3 +  39242232 tcc
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21218568 3 -  21565898 tcc
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       35687 3 -     53127 tcc
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        2972 3 +      7159 tcc
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       10490 3 -     27947 tcc
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         10466 3 +     17596 tcc
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         40967 3 -     41420 tcc
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Cheirogaleus_major.k141_333249                             17593 3 -     52598 tcc
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12943 3 +     57038 tcc
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chlorocebus_aethiops.ctg25                              18424428 3 -  18827391 tcc
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       10870 3 -     50209 tcc
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135417874 3 + 135778131 tcc
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1906396 3 +   2368649 TCC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199946065 3 + 200372422 tcc
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              32937 3 +     84244 tcc
i Colobus_polykomos.k141_906115                          C 0 C 0
s Cricetulus_griseus.LT883664.1                           11664182 1 + 224834208 t--
i Cricetulus_griseus.LT883664.1                          C 0 I 9
s Daubentonia_madagascariensis.ctg71                      12533774 3 -  12879189 ttc
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          15638 1 -    110024 t--
i Ellobius_lutescens.LOEQ01008920.1                      I 2656 I 9
s Ellobius_talpinus.LOJH01109367.1                            1691 1 -      6299 t--
i Ellobius_talpinus.LOJH01109367.1                       N 0 I 9
s Erythrocebus_patas.Contig38                             21201071 3 -  21539334 tcc
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              10274 3 -     14127 tcc
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                2972 3 -     16928 tcc
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              12005 3 -     25546 tcc
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             9190 3 +     26330 tcc
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 10447 3 +     23973 tcc
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 9190 3 +     75513 tcc
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  7141 3 +     97555 tcc
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            10068 3 +     26496 tcc
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                   674 3 -     17153 tcc
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              10253 3 +    111500 tcc
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_266699                476 3 +      2098 tcc
i Galeopterus_variegatus.GalVar_scaffold_266699          C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            31211 3 +     49224 tcc
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              11754 3 -     32273 tcc
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186333902 3 + 186649187 tcc
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   30934 3 +     78134 tcc
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           3338 3 -     19426 tcc
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              8482 3 -     15286 tcc
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             10120 3 +     18253 tcc
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         10223 3 -     41752 tcc
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         10056 3 -     16460 tcc
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Hoolock_leuconedys.ctg274                                    430646 3 +    630532 tcc
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_307679                               13577 3 -     15490 tcc
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              55583 3 +     67168 tcc
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189539233 3 - 191637585 tcc
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3332126 3 -  11177569 tcc
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7515470 3 -   7955117 tca
i Ictidomys_tridecemlineatus.JH393364.1                  I 19 I 149
s Indri_indri.k141_3655594                                   19038 3 +     31101 tcc
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8272564 3 -   9596543 tcc
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lemur_catta.scaffold_24                                 15520583 3 -  30322482 tcc
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          7493 3 -     23766 tcc
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             25440 3 +     45836 tcc
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         32352 3 -     32627 tcc
i Lepilemur_ruficaudatus.k141_420445                     I 39 C 0
s Lepilemur_septentrionalis.k141_185316                      23495 3 +     54090 tcc
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Lophocebus_aterrimus.ctg367                              1433002 3 +   1826925 tcc
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            2026 3 +     11245 tct
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1000863 3 +   6120653 tct
i Loris_tardigradus.ctg83                                C 0 C 0
s Macaca_arctoides.k141_2326796                               2823 3 +     40492 tcc
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59672078 3 +  60120075 tcc
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  8578 3 -     26193 tcc
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            76375 3 -    114318 tcc
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  2090 3 -     23192 tcc
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                11543 3 -     29190 tcc
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  20110 3 +     37952 tcc
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186835198 3 + 187317192 tcc
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25453761 3 -  25927173 TCC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  75959 3 +     89720 tcc
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 2957 3 +     20474 tcc
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   2758 3 -     14993 tcc
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  325630 3 -    668171 tcc
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 1061 3 -     24072 tcc
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               21697 3 -     45290 tcc
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23933245 3 -  24302211 tcc
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               347421 3 +    752769 tcc
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33098319 3 -  40650429 tca
i Marmota_marmota.CZRN01000018.1                         I 19 I 166
s Mesocricetus_auratus.KB708134.1                         12178574 1 -  29670104 t--
i Mesocricetus_auratus.KB708134.1                        C 0 I 9
s Microcebus_murinus.CM007674.1                           18287971 3 -  93316391 TCC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_534055                           4996 3 -     28506 tcc
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirza_zaza.k141_952172                                      5539 3 -     37649 tcc
i Mirza_zaza.k141_952172                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              3249 3 +     14296 tca
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Nannospalax_galili.AXCS01343547.1                            494 3 +       996 gcc
i Nannospalax_galili.AXCS01343547.1                      C 0 C 0
s Nasalis_larvatus.k141_413338                               10996 3 +     21681 ttc
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nycticebus_bengalensis.LG01                            102575846 3 - 196305487 tcc
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             3532 3 +      8486 tcc
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105746273 3 + 199412804 tcc
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   19852 1 +     28053 t--
i Ondatra_zibethicus.OndZib_scaffold_46174               I 2654 I 9
s Onychomys_torridus.OnyTor_scaffold_2986                    75342 1 +    102263 T--
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Pan_paniscus.KQ411613.1                                    39871 3 +     80009 TCC
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189138764 3 + 189151597 TCC
i Pan_troglodytes.CM009242.2                             C 0 I 217
s Papio_anubis.CM001495.2                                183439031 3 + 183742232 tcc
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             2724 3 +     20448 tcc
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20559529 3 +  20919399 tcc
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   1467 3 +     41871 tcc
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     4753 3 +     27711 tcc
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  4832 3 +      9205 tcc
i Papio_ursinus.k141_3428135                             C 0 C 0
s Perodicticus_ibeanus.k141_855320                            6028 3 +     13100 tcc
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             4401 3 +     25941 tcc
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18188129 1 -  18517816 t--
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Piliocolobus_badius.k141_1234363                           39508 3 +     62158 tcc
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        34230 3 +     89929 tcc
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            35646 3 +     51399 tcc
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14291882 3 -  14605196 TCC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189126956 3 + 189387572 tcc
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9566562 3 +   9816681 tcc
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               69157 3 -     81375 ttc
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                               978 3 +     19060 ttc
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2593235 3 -   4620579 TCC
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     987248 3 +   2598838 CCC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          25537 3 +     38485 ccc
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             1696 3 +      4256 ccc
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          23056 3 +     35766 ccc
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           1239 3 -     24134 ccc
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        25051 3 -     67325 ccc
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           1296 3 -      6182 ccc
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pygathrix_cinerea.k141_1153803                             10989 3 -     91421 ttc
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7605117 3 +   7812017 ttc
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10958 3 -     72585 ttc
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             2673 3 -     11128 ttc
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91232028 3 - 195417433 TTC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7667677 3 +   7961872 ttc
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Semnopithecus_entellus.k141_11662                          15501 3 -     19888 ttc
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      22703 3 +     39453 ttc
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            3229 3 +     27826 ttc
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             2750 3 -     19483 ttc
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      2812 3 +      7198 ttc
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         11072 3 +     15514 ttc
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1949102 3 -   3870691 tca
i Spermophilus_dauricus.KZ294078.1                       I 19 I 165
s Symphalangus_syndactylus.tarseq_199                      1089277 3 -   1523678 tcc
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_2201908                               11547 3 +     70052 tcc
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               15852 3 +     25099 tcc
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186424075 3 + 186847797 tcc
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          6803 3 -     20410 ttc
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    10999 3 +     15221 ttc
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        6904 3 +     19930 ttc
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       3334 3 -     19997 ttc
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            43453 3 -     60166 ttc
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        10924 3 -     27529 ttc
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     10866 3 -     18194 ttc
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           4601 3 -     21137 ttc
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    3304 3 -     10723 ttc
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         2456 3 +      9834 ttc
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        20774 3 +     32220 ttc
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5934871 3 +   6242583 ttc
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        4118 3 +     20839 ttc
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Varecia_rubra.k141_590885                                   7916 3 +     50397 tcc
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              7971 3 +     24756 tcc
i Varecia_variegata.k141_1128296                         C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        20615 1 -     24430 t--
i Xerus_inauris.XerIna_scaffold_48378                    I 19 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      11556 3 +     63895 tcc
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Mus_spretus.CM004101.1                                  90748383 358 - 130317789 I
e Mus_musculus.chr8                                       87646309 357 - 129401213 I
e Mus_caroli.LT608237.1                                   84357336 358 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906 0 -     10935 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zalophus_californianus.ZalCal_flattened_line_17732          2475 0 +     86975 C
e Vulpes_lagopus.VulLag_flattened_line_30954                  8219 0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5369239 0 -   5488506 C
e Ursus_maritimus.KK499267.1                               4847767 0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   52374 0 -     77625 C
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     4887 0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2151571 0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553 7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   2797 0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937 0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    384502 0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      116051 0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 70231 0 +    116680 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                 7643 0 +     41958 C
e Sus_scrofa.JH118708.1                                      32590 0 -     47482 C
e Suricata_suricatta.SurSur_flattened_line_6629              15608 0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             28038 0 +     97271 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_5840            188497 0 -    191337 C
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359 0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152174 0 -    313613 C
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                85541 0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rattus_norvegicus.chr16                                 53566216 434 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20271604 0 -  38429054 C
e Pteropus_vampyrus.KN525825.1                             1357630 0 +   4952924 C
e Pteropus_alecto.KB030862.1                              22974540 0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         37522 0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            12065 0 -     21811 C
e Psammomys_obesus.NESX01036370.1                             5904 349 -     21651 I
e Procavia_capensis.ProCapCap_scaffold_85530                 10240 0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823 1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813 0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9940 0 -     78924 C
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4718322 0 -   8748460 C
e Panthera_pardus.KV860321.1                                261685 0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  148478 0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       459559 0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              503905 0 -   2017862 C
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1359220 0 +   3988456 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9146805 0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    757209 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186877 0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33016 1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456 1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390 1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692 1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               298505 0 -  14710649 C
e Murina_feae.MurFea_scaffold_85699                           5520 1 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   32702 0 +     37127 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 138676 0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         2599 0 -      8324 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686 0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11256644 174 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009 7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Meriones_unguiculatus.MerUng_scaffold_7390                 28263 354 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365              7322 0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                         7651 0 -    207569 C
e Manis_pentadactyla.KN006162.1                              48157 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              16772 0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 88359 0 +     94391 C
e Lycaon_pictus.CM007581.1                                17952544 0 -  59628241 C
e Loxodonta_africana.GL010049.1                            4214777 0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3039763 0 +   3914936 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547 0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  41757 0 +     55795 C
e Hipposideros_galeritus.HipGal_scaffold_29171               40558 6 +     43066 I
e Hipposideros_armiger.JXIK01000431.1                       109122 6 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491 0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               239595 0 +    327341 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Galagoides_demidoff.k141_31856                              3354 0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  6829 0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20193317 0 + 205367284 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Equus_przewalskii.KK951119.1                               30446 0 +    498745 C
e Equus_caballus.CM000403.2                               18528431 0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1280610 0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2144447 1 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16326615 0 -  41312741 C
e Elephantulus_edwardii.JH947257.1                         1089268 0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Eidolon_helvum.KE759718.1                                   8270 0 +     11740 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084 0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    3324 0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  670569 0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8628495 7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            61937 0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             25769 0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_239572              2140 5 -      5012 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 47011 110 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          11367 0 -     20389 C
e Condylura_cristata.JH655891.1                           17547123 0 -  53390261 C
e Choloepus_hoffmanni.KN194906.1                            171056 0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15957 0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498 0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            5629 0 -      6351 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_247804          3434 0 -      3715 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157 0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     90107 0 +    217609 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465 7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18497604 0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17956304 0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9032039 0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    182653 0 -    185531 C
e CanFam4.chr16                                           17796596 0 -  60362399 C
e Camelus_ferus.KB017975.1                                  400489 0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2332213 0 -   7040546 C
e Camelus_bactrianus.KN276810.1                            9999749 0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102 7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691 7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Ailurus_fulgens.LNAC01001112.1                             76634 0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9507851 0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     66741 239 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           824607 0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       2522 20 +     62944 ttgggccttg-tcctCAAGAG
s Allactaga_bullata.AllBul_scaffold_9566                     66213  1 -     89534 t--------------------
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   10501 19 -     52922 tcgggccttg-tcctcaaga-
i Allenopithecus_nigroviridis.k141_3361533               C 0 I 1
s Allochrocebus_lhoesti.k141_4309873                         10432 19 -     28001 tcgggccttg-tcctcaaga-
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                           878 19 -     18505 tcgggccttg-tcctcaaga-
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           1727 19 -     12518 tcgggccttg-tcctcaaga-
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Arctocebus_calabarensis.k141_288239                        15798  1 +     17124 t--------------------
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Avahi_laniger.k141_765380                                  50174  1 -     92717 t--------------------
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              50803  1 +     85213 t--------------------
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Carlito_syrichta.NW_007259797.1                           141937  1 -    496798 T--------------------
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    134670  1 +    179628 T--------------------
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         5852  1 -      8605 t--------------------
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4471460 19 +   4669795 ttgggcctTG-TCCTCAAGG-
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        10009 19 -     19203 ttgggccttg-tcctcaagg-
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           4430 19 +      8260 ttgggccttg-tcctcaagg-
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           4658 19 +     27781 ttgggccttg-tcctcaagg-
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         4806 19 -     20310 tcgggccttg-tcctcaaga-
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           7790 19 +     29689 tcgggccttg-tcctcaaga-
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            2226 19 +      9989 tcgggccttg-tcctcaaga-
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          10473 19 -     27936 tcgggccttg-tcctcaaga-
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                            10500 19 -     11289 tcgggccttg-tcctcaaga-
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38812872 19 +  39242232 tcgggccttg-tcctcaaga-
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21218571 19 -  21565898 tcgggccttg-tcctcaaga-
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       35690 19 -     53127 tcgggccttg-tcctcaaga-
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        2975 19 +      7159 tcgggccttg-tcctcaaga-
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       10493 19 -     27947 tcgggccttg-tcctcaaga-
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         10469 19 +     17596 tcgggccttg-tcctcaaga-
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         40970 19 -     41420 tcgggccttg-tcctcaaga-
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Cheirogaleus_major.k141_333249                             17596  1 -     52598 t--------------------
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12946  1 +     57038 t--------------------
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chlorocebus_aethiops.ctg25                              18424431 19 -  18827391 tcgggccttg-tcctcaaga-
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       10873 19 -     50209 tcgggccttg-tcctcaaga-
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135417877 19 + 135778131 tcggGCCTTG-TCCTCAAGA-
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1906399 20 +   2368649 TTGGGCCTTG-TCCTCAAGAG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199946068 20 + 200372422 ttgggccttg-tcctcaagag
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              32940 20 +     84244 ttgggccttg-tcctcaagag
i Colobus_polykomos.k141_906115                          C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12533777  1 -  12879189 t--------------------
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Erythrocebus_patas.Contig38                             21201074 19 -  21539334 tcgggccttg-tcctcaaga-
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              10277  1 -     14127 t--------------------
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                2975  1 -     16928 t--------------------
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              12008  1 -     25546 t--------------------
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             9193  1 +     26330 t--------------------
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 10450  1 +     23973 t--------------------
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 9193  1 +     75513 t--------------------
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  7144  1 +     97555 t--------------------
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            10071  1 +     26496 t--------------------
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                   677  1 -     17153 t--------------------
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              10256  1 +    111500 t--------------------
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_266699                479  1 +      2098 t--------------------
i Galeopterus_variegatus.GalVar_scaffold_266699          C 0 I 127
s Glis_glis.GliGli_scaffold_19807                            31214  1 +     49224 t--------------------
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              11757 20 -     32273 ttgggccttg-tcctcaagag
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186333905 20 + 186649187 ttgggccttg-tcctcaagag
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   30937  1 +     78134 t--------------------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           3341  1 -     19426 a--------------------
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              8485  1 -     15286 a--------------------
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             10123  1 +     18253 a--------------------
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         10226  1 -     41752 a--------------------
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         10059  1 -     16460 a--------------------
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Hoolock_leuconedys.ctg274                                    430649 20 +    630532 ttgggccttg-tcctcaagag
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_307679                               13580 20 -     15490 ttgggccttg-tcctcaagag
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              55586 20 +     67168 ttgggccttg-tcctcaagag
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189539236 20 - 191637585 ttgggccttg-tcctcaagag
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3332129 20 -  11177569 ttgggccttg-tcctcaagag
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7515622  1 -   7955117 t--------------------
i Ictidomys_tridecemlineatus.JH393364.1                  I 149 C 0
s Indri_indri.k141_3655594                                   19041  1 +     31101 t--------------------
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8272567  1 -   9596543 t--------------------
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lemur_catta.scaffold_24                                 15520586  1 -  30322482 a--------------------
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          7496  1 -     23766 t--------------------
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             25443  1 +     45836 t--------------------
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         32355  1 -     32627 t--------------------
i Lepilemur_ruficaudatus.k141_420445                     C 0 I 144
s Lepilemur_septentrionalis.k141_185316                      23498  1 +     54090 t--------------------
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Lophocebus_aterrimus.ctg367                              1433005 19 +   1826925 tcgggccttg-tcctcaagg-
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            2029  1 +     11245 t--------------------
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1000866  1 +   6120653 t--------------------
i Loris_tardigradus.ctg83                                C 0 C 0
s Macaca_arctoides.k141_2326796                               2826 19 +     40492 ttgggccttg-tcctcaagg-
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59672081 19 +  60120075 ttgggccttg-tcctcaagg-
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  8581 19 -     26193 ttgggccttg-tcctcaagg-
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            76378 19 -    114318 ttgggcctca-tcctcaagg-
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  2093 19 -     23192 ttgggccttg-tcctcaagg-
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                11546 19 -     29190 ttgggccttg-tcctcaagg-
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  20113 19 +     37952 ttgggccttg-tcctcaagg-
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186835201 19 + 187317192 ttgggccttG-TCCTCAAGG-
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25453764 19 -  25927173 TTGGGCCTTG-TCCTCAAGG-
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  75962 19 +     89720 ttgggccttg-tcctcaagg-
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 2960 19 +     20474 ttgggccttg-tcctcaagg-
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   2761 19 -     14993 ttgggccttg-tcctcaagg-
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  325633 19 -    668171 ttgggccttg-tcctcaagg-
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 1064 19 -     24072 ttgggccttg-tcctcaagg-
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               21700 19 -     45290 ttgggccttg-tcctcaagg-
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23933248 19 -  24302211 tcgggccttg-tcctcaagg-
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               347424 19 +    752769 tcgggccttg-tcctcaagg-
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33098488  1 -  40650429 t--------------------
i Marmota_marmota.CZRN01000018.1                         I 166 C 0
s Microcebus_murinus.CM007674.1                           18287974  1 -  93316391 T--------------------
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_534055                           4999 19 -     28506 tcgggccttg-tcctcaaga-
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirza_zaza.k141_952172                                      5542  1 -     37649 t--------------------
i Mirza_zaza.k141_952172                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              3252  1 +     14296 t--------------------
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Nannospalax_galili.AXCS01343547.1                            497  1 +       996 t--------------------
i Nannospalax_galili.AXCS01343547.1                      C 0 C 0
s Nasalis_larvatus.k141_413338                               10999 20 +     21681 ttgggccttg-tcctcaagag
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nycticebus_bengalensis.LG01                            102575849  1 - 196305487 t--------------------
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             3535  1 +      8486 t--------------------
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105746276  1 + 199412804 t--------------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Pan_paniscus.KQ411613.1                                    39874 20 +     80009 TTGGGCCTTG-TCCTCAAGAG
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.KZ622849.1                                 18052 20 +    110857 TTGGGCCTTG-TCCTCAAGAG
i Pan_troglodytes.KZ622849.1                             I 636 I 544
s Papio_anubis.CM001495.2                                183439034 19 + 183742232 tcgggcctTG-TCCTCAAGG-
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             2727 19 +     20448 tcgggccttg-tcctcaagg-
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20559532 19 +  20919399 tcgggccttg-tcctcaagg-
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   1470 19 +     41871 tcgggccttg-tcctcaagg-
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     4756 19 +     27711 tcgggccttg-tcctcaagg-
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  4835 19 +      9205 tcgggccttg-tcctcaagg-
i Papio_ursinus.k141_3428135                             C 0 C 0
s Perodicticus_ibeanus.k141_855320                            6031  1 +     13100 t--------------------
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             4404  1 +     25941 t--------------------
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Piliocolobus_badius.k141_1234363                           39511 20 +     62158 ttgggccttg-tccttaaaag
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        34233 20 +     89929 ttgggccttg-tccttaagag
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            35649 20 +     51399 ttgggccttg-tccttaagag
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14291885 20 -  14605196 TTGGGCCTTG-TCCTTAAGAG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189126959 20 + 189387572 ttgggccttg-tcctCAAGAG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9566565 20 +   9816681 ttgggccttg-tcctcaagag
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               69160 20 -     81375 ttgggccttg-tcctcaagag
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                               981 20 +     19060 ttgggccttg-tcctcaagag
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2593238  1 -   4620579 A--------------------
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     987251  1 +   2598838 T--------------------
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          25540  1 +     38485 t--------------------
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             1699  1 +      4256 t--------------------
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          23059  1 +     35766 t--------------------
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           1242  1 -     24134 t--------------------
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        25054  1 -     67325 t--------------------
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           1299  1 -      6182 t--------------------
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pygathrix_cinerea.k141_1153803                             10992 20 -     91421 ttgggccttg-tcctcaagag
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7605120 20 +   7812017 ttgggccttg-tcctcaagag
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10961 20 -     72585 ttgggccttg-tcctcaagag
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             2676 20 -     11128 ttgggccttt-tcctcaagag
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91232031 20 - 195417433 TTGGGCCTTT-TCCTCAAGAG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7667680 20 +   7961872 ttgggccttt-tcctcaagag
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Semnopithecus_entellus.k141_11662                          15504 20 -     19888 ttgggccttg-tcctcaagag
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      22706 20 +     39453 ttgggccttg-tcctcaagag
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            3232 20 +     27826 ttgggccttg-tcctcaagag
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             2753 20 -     19483 ttgggccttg-tcctcaagag
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      2815 20 +      7198 ttgggccttg-tcctcaagag
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         11075 20 +     15514 ttgggccttg-tcctcaagag
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1949270  1 -   3870691 t--------------------
i Spermophilus_dauricus.KZ294078.1                       I 165 C 0
s Symphalangus_syndactylus.tarseq_199                      1089280 20 -   1523678 ttgggccttg-tcctcaagag
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_2201908                               11550  1 +     70052 t--------------------
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               15855  1 +     25099 t--------------------
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186424078 19 + 186847797 tcgggcctTG-TCCTCAAGG-
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          6806 20 -     20410 ttgggcctcg-tcctcaagag
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    11002 20 +     15221 ttggaccttg-tcctcaagag
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        6907 20 +     19930 ttgggcctcg-tcctcaagag
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       3337 20 -     19997 ttgggccttg-tcctcaagag
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            43456 20 -     60166 ttgggccttg-tcctcaagag
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        10927 20 -     27529 ttgggccctg-tcctcaagag
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     10869 20 -     18194 ttgggccttg-tcctcaagag
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           4604 20 -     21137 ttgggccttg-tcctcaagag
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    3307 20 -     10723 ttgggccttg-tcctcaagag
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         2459 20 +      9834 ttgggccttg-tcctcaagag
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        20777 21 +     32220 ttgggcccttgtcctcaagag
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5934874 20 +   6242583 ttgggccttg-tcctcaagag
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        4121 20 +     20839 ttgggccttg-tcctcaagag
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2151571  1 +   4065304 t--------------------
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     4887  1 -     10553 t--------------------
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Varecia_rubra.k141_590885                                   7919  1 +     50397 t--------------------
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              7974  1 +     24756 t--------------------
i Varecia_variegata.k141_1128296                         C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      11559  1 +     63895 t--------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Mus_spretus.CM004101.1                                  90748383 358 - 130317789 I
e Mus_musculus.chr8                                       87646309 357 - 129401213 I
e Mus_caroli.LT608237.1                                   84357336 358 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zalophus_californianus.ZalCal_flattened_line_17732          2475  0 +     86975 C
e Xerus_inauris.XerIna_scaffold_48378                        20616  0 -     24430 C
e Vulpes_lagopus.VulLag_flattened_line_30954                  8219  0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5369239  0 -   5488506 C
e Ursus_maritimus.KK499267.1                               4847767  0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   52374  0 -     77625 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   2797  0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    384502  0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      116051  0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 70231  0 +    116680 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                 7643  0 +     41958 C
e Sus_scrofa.JH118708.1                                      32590  0 -     47482 C
e Suricata_suricatta.SurSur_flattened_line_6629              15608  0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             28038  0 +     97271 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_5840            188497  0 -    191337 C
e Sigmodon_hispidus.SigHis_scaffold_60841                     9359  0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152174  0 -    313613 C
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                85541  0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rattus_norvegicus.chr16                                 53566216 434 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20271604  0 -  38429054 C
e Pteropus_vampyrus.KN525825.1                             1357630  0 +   4952924 C
e Pteropus_alecto.KB030862.1                              22974540  0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         37522  0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            12065  0 -     21811 C
e Psammomys_obesus.NESX01036370.1                             5904 349 -     21651 I
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18188130  0 -  18517816 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9940  0 -     78924 C
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Panthera_tigris.KE722367.1                               4718322  0 -   8748460 C
e Panthera_pardus.KV860321.1                                261685  0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  148478  0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       459559  0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    75343  0 +    102263 C
e Ondatra_zibethicus.OndZib_scaffold_46174                   19853  9 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              503905  0 -   2017862 C
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1359220  0 +   3988456 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9146805  0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    757209  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186877  0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               298505  0 -  14710649 C
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   32702  0 +     37127 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 138676  0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         2599  0 -      8324 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11256644 174 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12178575  9 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 28263 354 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365              7322  0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                         7651  0 -    207569 C
e Manis_pentadactyla.KN006162.1                              48157  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              16772  0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 88359  0 +     94391 C
e Lycaon_pictus.CM007581.1                                17952544  0 -  59628241 C
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3039763  0 +   3914936 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  41757  0 +     55795 C
e Hipposideros_galeritus.HipGal_scaffold_29171               40558  6 +     43066 I
e Hipposideros_armiger.JXIK01000431.1                       109122  6 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               239595  0 +    327341 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Galagoides_demidoff.k141_31856                              3354  0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  6829  0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20193317  0 + 205367284 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Equus_przewalskii.KK951119.1                               30446  0 +    498745 C
e Equus_caballus.CM000403.2                               18528431  0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1280610  0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16326615  0 -  41312741 C
e Ellobius_talpinus.LOJH01109367.1                            1692  9 -      6299 I
e Ellobius_lutescens.LOEQ01008920.1                          15639  9 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Eidolon_helvum.KE759718.1                                   8270  0 +     11740 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    3324  0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  670569  0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            61937  0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             25769  0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_239572              2140  5 -      5012 I
e Cricetulus_griseus.LT883664.1                           11664183  9 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 47011 110 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          11367  0 -     20389 C
e Condylura_cristata.JH655891.1                           17547123  0 -  53390261 C
e Choloepus_hoffmanni.KN194906.1                            171056  0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15957  0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            5629  0 -      6351 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_247804          3434  0 -      3715 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     90107  0 +    217609 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18497604  0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17956304  0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9032039  0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    182653  0 -    185531 C
e CanFam4.chr16                                           17796596  0 -  60362399 C
e Camelus_ferus.KB017975.1                                  400489  0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2332213  0 -   7040546 C
e Camelus_bactrianus.KN276810.1                            9999749  0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Aplodontia_rufa.AprRuf_scaffold_68852                       8147  0 +     20879 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Ailurus_fulgens.LNAC01001112.1                             76634  0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9507851  0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     66741 239 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           824607  0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       2542 198 +     62944 CC---AAG-------AGCCA-------GAA--ACCTGCTAA--GTCAGTTTAGCCAGAACT-TC-CCGCCCTCAACAAGTGTTCTGATCAATTTCCTCACTCCCCACAGAACCTCCTGCACTCAACGTGTGTTCTG-------AGCAATGTCCTCACTC--C-C-----CC---ACCATCCCCA-GGTGATATCT-CAGCACTC-----TAGT---GCCTGCAGGATTCTGAATAAGTTCAGACA---G----------AAT
s Allactaga_bullata.AllBul_scaffold_9566                     66214 131 -     89534 -c---aaa-------atcca-------gaa--ttctgca--aagtca-ttttgtcagcatctc--ccatcctctatgtcataattg---------------------------------------------------------gtcaatttcctt-ctcgtt-c-----tt---ctggaccgca-gggattgtct-ggtcactc-----t-gtcctgacttcag---------------------caaa----------aat
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 26
s Allenopithecus_nigroviridis.k141_3361533                   10521 148 -     52922 cc---aag-------agcca-------gaa--acctgatga--gtcggtttagcccgaacc-tc-ccgccctcaacataagttgtg---------------------------------------------------------atcaatgtgctcactc--c-c-----cc---accaccccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Allenopithecus_nigroviridis.k141_3361533               I 1 C 0
s Allochrocebus_lhoesti.k141_4309873                         10451 148 -     28001 cc---aag-------agcca-------aaa--acctgctga--gtcggtttagcccgaacc-tc-ccgccctcaacgtaagttgtg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accagcacca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                           897 148 -     18505 cc---aag-------agcca-------aaa--acctgctga--gtcggtttagcccgaacc-tc-ccatcctcaacataagttgtg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accagcccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           1746 148 -     12518 cc---aag-------agtca-------gaa--acctgctga--gtcggtttagcccgaact-tc-ccgccctcaacgtaagttgtg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accagcccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       8147 131 +     20879 -c---aag-------aatca-------gaa--tcctacc--aagtcagtttaaacagaatc-c--tctcc---gacctccgatctg---------------------------------------------------------gtcaatttcctc-atc--c-acaccaca---gacatgccca-ggcaccatta-gatcaccc-----t-gggctgttttcac---------------------caag----------aat
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 28
s Arctocebus_calabarensis.k141_288239                        15799 128 +     17124 -c---aaa-------tccca-------gaa--tcctgctgt--attgggttagccagagtctct-ccacccttgataggtagtcag---------------------------------------------------------acccctgtcggccatc--c-t-----tc---a---tctcca-g-tgatgtct-gttcaatc-----cagcc-tgccttcagca------------------a---g----------aat
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Avahi_laniger.k141_765380                                  50175 144 -     92717 -c---cag-------accct-------gaa--tcctgctaa--gtcagagtagccagaatctcc-ccacccttgatatctgatctg---------------------------------------------------------atcactttcctcaatt--c-t-----cc-cagccatttcca-ggtgatatct-gttcaatc-----tggcc-tgcctttggca------------------a---gcctcctggtgagt
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              50804 144 +     85213 -c---cag-------accct-------gaa--tcctgctaa--gtcagagtagccagaatctcc-ccacccttgatatctgatctg---------------------------------------------------------atcactttcctcaatt--c-t-----cc-cagccatttcca-ggtgatatct-gttcaatc-----tggcc-tgcctttggca------------------a---gcctcctggtgagt
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Carlito_syrichta.NW_007259797.1                           141938  47 -    496798 -T---AAG-------AACCA-------GAA--TCTTGCTAA--GTCAATTTAGCCAGAATC-TT-CCACCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Carlito_syrichta.NW_007259797.1                        C 0 I 78
s Castor_canadensis.CasCan_scaffold_2074                    134671 116 +    179628 -C---AAG-------AGCCT-------gaa--tcttgct--aagtaaatttagtcagaatc-t-cctatcctctataccagaacgg---------------------------------------------------------atcaatttcctc-atc--c-t-----tc---atcatcccca-ggtgatatct-gatcactc-----t-ggcctg---------------------------------------------
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 22
s Cephalopachus_bancanus.k141_2037105                         5853  47 -      8605 -t---aag-------aacca-------gaa--tcttgctaa--gacaatttagccagaatc-tt-ccacca-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Cephalopachus_bancanus.k141_2037105                    C 0 I 70
s Cercocebus_atys.KQ010504.1                               4471479 148 +   4669795 CC---AAG-------AGCCA-------GAA--ACCTGATGA--GTCGGTTTAGCCAGAACC-TC-CCGCCCTCAACATAAGTTCTG---------------------------------------------------------ATCAGTGTCCTCagtc--c-c-----cc---accaccccca-ggtAATATCT-CAGCACTC-----TAGT---GCCTCCAGCATTCTGAGTAAGTTCAGACA---G----------AAT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        10028 148 -     19203 cc---aag-------agcca-------gaa--acctgatga--gtcggtttagccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcagtgtcctcactc--c-c-----cc---accaccccca-ggtaatatct-cagcactc-----tagt---gcctccagcattctgagtaagttcagaca---g----------aat
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           4449 148 +      8260 cc---aag-------agcca-------gaa--acctgatga--gtcggtttagccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcagtgtcctcagtc--c-c-----cc---accaccccca-ggtaatatct-cagcactc-----tagt---gcctccagcattctgagtaagttcagaca---g----------aat
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           4677 148 +     27781 cc---aag-------agcca-------gaa--acctgatga--gtcggtttagccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcagtgtcctcactc--c-c-----cc---accaccccca-ggtaatatct-cagcactc-----tagt---gcctccagcattctgagtaagttcagaca---g----------aat
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         4825 148 -     20310 cc---aag-------agcca-------gaa--acctgctga--gtcggtttagccagaacc-tc-ccaccctcaacataagttgtg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accaccccca-ggtaatgtct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           7809 148 +     29689 cc---aag-------agcca-------gaa--acctgctga--gtcggtttagccagaacc-tc-ccaccctcaacataagttgtg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accatcccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            2245 148 +      9989 cc---aag-------agcca-------gaa--acctgctga--gtcggtttagccagaacc-tc-ccaccctcaacataagttgtg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accatcccca-ggtaatatct-cagcactc-----tagt---gcctccgggattctgagtaagttcagaca---g----------aat
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          10492 148 -     27936 ct---aag-------agcca-------gaa--acctgctga--gtcggtttagccagaacc-tc-ccgccctcaacataagttgtg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accatcccca-ggtaacatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                            10519 148 -     11289 cc---aag-------agcca-------gaa--acctgctga--gtcggtttagcccgaacc-tc-ccgccctcaacataagttgtg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accaccccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aac
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38812891 148 +  39242232 cc---aag-------agcca-------gaa--acctgctga--gtcggtttagcccgaacc-tc-ccgccctcaacataagttgtg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accaccccca-ggtaatatcc-cagcactc-----tagt---gcctccaggattctgagtaatttcagaca---g----------aat
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21218590 148 -  21565898 cc---aag-------agcca-------gaa--acctgctga--gtcggtttagcccgaacc-tc-ccgccctcaacataagttgtg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accaccccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aac
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       35709 148 -     53127 cc---aag-------agcca-------gaa--acctgctga--gtcggtttagcccgaacc-tc-ccgccctcaacataagttgtg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accaccccca-ggtaatatct-cagcactc-----tagt---gcctctaggattctgagtaagttcagaca---g----------aac
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        2994 148 +      7159 cc---aag-------agcca-------gaa--acctgctga--gtcggtttagccagaacc-tc-ccaccctcaacataagttgtg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accatcccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       10512 148 -     27947 cc---aag-------agcca-------gaa--acctgctga--gtcggtttagcccgaacc-tc-ccgccctcaacataagttgtg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accaccccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aac
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         10488 148 +     17596 cc---aag-------agcca-------gaa--acctgctga--gtcggtttagcccgaacc-tc-ccgccctcaacataagttgtg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accaccccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aac
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         40989 148 -     41420 cc---aag-------agcca-------gaa--acctgctga--gtcggtttagccagaacc-tc-ccgccctcaacataagttgtg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accatcccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Cheirogaleus_major.k141_333249                             17597 145 -     52598 -c---tag-------accct-------gaa--tcctgctaa--gtcagtgtagccagaatcttc-tcacccttgatatctggtctg---------------------------------------------------------atcactttcctctatc--ctc-----cct-agccatctcca-ggtgatctct-gttcaatc-----ccgcc-tgccttcagca------------------a---gcctcctggtgagt
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           12947 145 +     57038 -c---cgg-------cccct-------gaa--tcctgctaa--gtcagtgtagccagaatctcc-ccacccttgatatctggtctg---------------------------------------------------------atcactttcctctatc--ctc-----cc-cagccatctcca-ggtgatctct-gttcaatc-----ccgcc-tgccttcagca------------------a---gcctcctggtgagt
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chlorocebus_aethiops.ctg25                              18424450 148 -  18827391 cc---aag-------agcca-------gaa--acctgctga--gtcggtttagcccgaacc-tc-ccgccctcaacataagttgtg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accagcccca-ggtaatatcg-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       10892 148 -     50209 cc---aag-------agcca-------gaa--acctgctga--gtcggtttagcccgaacc-tc-ccgccctcaacataagttgtg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accagcccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135417896 148 + 135778131 CC---AAG-------AGCCA-------GAA--ACCTGCTGA--GTCGGTTTAGCCCGAACC-TC-CTGCCCTCAACATAAGTTGTG---------------------------------------------------------ATCAATGTCCTCACTC--C-C-----CC---ACCAGCCCCA-GGTAATATCT-CAGCACTC-----TAGT---GCCTCCAGGATTCTGAGTAAGTTCAGACA---G----------AAT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1906419 143 +   2368649 CC---AAG-------AGCCA-------GAA--ACCTGCTAA--GTCGGTTTAGCCAGAACC-TC-CCGCCCTCAACATAAGTTCTG---------------------------------------------------------ATCAATGTCCTCACTC--C-C-----CC---ACCATCCCCA-GGTAATATCT-CAGCATTC-----TAGT---GCCTCCAGGAATCTGAGTAAGTTCAGAC------------------
i Colobus_angolensis.KN981557.1                          C 0 I 3
s Colobus_guereza.LG01                                   199946088 143 + 200372422 cc---aag-------agcca-------gaa--acctgctaa--gtcggtttagccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accatcccca-ggtaatatct-cagcattc-----tagt---gcctccaggaatctgagtaagttcagac------------------
i Colobus_guereza.LG01                                   C 0 I 3
s Colobus_polykomos.k141_906115                              32960 143 +     84244 cc---aag-------agcca-------gaa--acctgctaa--gtcggtttagccagaacc-tc-ccgccctcaacgtaagttctg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accatcccca-ggtaatatct-cagcattc-----tagt---gcctccaggaatctgagtaagttcagac------------------
i Colobus_polykomos.k141_906115                          C 0 I 3
s Cricetulus_griseus.LT883664.1                           11664192 115 + 224834208 -----------------cca-------gaa--tcctgat--caaaca-tttagctagattctc--ccattcttggtttcatagctg---------------------------------------------------------atccacttcctc-act--c-t-----gc---attatcccta-ggttttggcttagtc---------t-g-----tcttcat---------------------caag----------aat
i Cricetulus_griseus.LT883664.1                          I 9 C 0
s Daubentonia_madagascariensis.ctg71                      12533778 141 -  12879189 -c---aag-------accca-------gaa--ccttgctaa--gtcagttcagccagcatc-cc-ccacccttgaaatctggtctg---------------------------------------------------------atcgctttcctcgaca--g-c-----gc---ctccccccca-ggtgatatct-gttcaatc-----cagcc-tgccttcgaca------------------a---gaatcctggtgagt
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          15648 114 -    110024 -----------------CCa-------gaa--tcccaat--caaatg-cttagctagactctc--ccattcttggtagcataactg---------------------------------------------------------atcaatttcctc-att--c-t-----tc---attgtcccta-ggtgatgtcttggtc---------t-------tattcag---------------------caag----------aat
i Ellobius_lutescens.LOEQ01008920.1                      I 9 I 464
s Ellobius_talpinus.LOJH01109367.1                            1701 114 -      6299 -----------------CCa-------gaa--tcccaat--caaatg-cttagctagaatctc--ccattcttggtagaataactg---------------------------------------------------------atcaatttcctc-att--c-t-----tc---attgtcccta-ggtgatgtcttggtc---------t-------tcttcag---------------------caag----------aat
i Ellobius_talpinus.LOJH01109367.1                       I 9 I 471
s Erythrocebus_patas.Contig38                             21201093 148 -  21539334 cc---aag-------agcca-------gaa--acctgctga--gtcggtttagcccgaacc-tc-ccaccctcaacataagttgtg---------------------------------------------------------atcaatgtcctcgctc--c-c-----cc---accagcccca-agtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              10278 145 -     14127 -c---cag-------accct-------gaa--tcctgctaa--gtcagtgtagccagaatctcc-ccacccttgatatctgatctg---------------------------------------------------------atcactttcctcaatc--c-c-----catcaaccatctcca-ggtgatatct-gttccatc-----ccgcc-tgccttcagca------------------a---gcatcctggtgagt
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                2976 145 -     16928 -c---cag-------accct-------gaa--tcctgctaa--gtcagtgtagccagaatctcc-ccacccttgatatctgatctg---------------------------------------------------------atcactttcctcaatc--c-c-----catcaaccatctcca-ggtgatatct-gttccatc-----ccgcc-tgccttcagca------------------a---gcatcctggtgagt
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              12009 145 -     25546 -c---cag-------accct-------gaa--tcctgctaa--gtcagtgtagccagaatctcc-ccacccttgatatctgatctg---------------------------------------------------------atcactttcctcaatc--c-c-----catcaaccatctcca-ggtgatatct-gttccatc-----ccacc-tgccttcagca------------------a---gcatcctggtgagt
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             9194 145 +     26330 -c---cag-------accct-------gaa--tcctgctaa--gtcagtgtagccagaatctcc-ccacccttgatatctgatctg---------------------------------------------------------atcactttcctcaatc--c-c-----catcaaccatctcca-ggtgatatct-gttccatc-----ccacc-tgccttcagca------------------a---gcatcctggtgagt
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 10451 144 +     23973 -c---cag-------accct-------g-a--tcctgctaa--gtcagtgtagccagaatctcc-ccacccttgatatctgatctg---------------------------------------------------------atcactttcctcaatc--c-c-----catcaaccatctcca-ggtgatatct-gttccatc-----ccacc-tgctttcagca------------------a---gcatcctggtgagt
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 9194 145 +     75513 -c---cag-------accct-------gaa--tcctgctaa--gtcagtgtagccagaatctcc-ccacccttgatatctgatctg---------------------------------------------------------atcactttcctcaatc--c-c-----catcaaccatctcca-ggtgatatct-gttccatc-----ccacc-tgccttcagca------------------a---gcatcctggtgagt
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  7145 145 +     97555 -c---cag-------accct-------gaa--tcctgctaa--gtcagtgtagccagaatcttc-ccacccttgatatctgatctg---------------------------------------------------------atcactttcctcaatc--c-c-----catcaaccatctcca-ggtgatatct-gttccatc-----ccgcc-tgccttcagca------------------a---gcatcctggtgagt
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            10072 145 +     26496 -c---cag-------accct-------gaa--tcctgctaa--gccagtgtagccagaatctcc-ccacccttgatatctgatctg---------------------------------------------------------atcactttcctcaatc--c-c-----catcaaccatctcca-ggtgatatct-gttccatc-----ccgcc-tgccttccgca------------------a---gcatcctggtgagt
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                   678 145 -     17153 -c---cag-------accct-------gaa--tcctgctaa--gtcagtgtagccagaatctcc-ccacccttgatatctgatctg---------------------------------------------------------atcactttcctcaatc--c-c-----catcaaccatctcca-ggtgatatct-gttccatc-----ccgcc-tgccttcagca------------------a---gcatcctggtgagt
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              10257 145 +    111500 -c---cag-------accct-------gaa--tcctgctaa--gtcagtgtagccagaatctcc-ccacccttgatatctgatctg---------------------------------------------------------atcactttcctcaatc--c-c-----catcaaccatctcca-ggtgatatct-gttccatc-----ccgcc-tgccttcagca------------------a---gcatcctggtgagt
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_197845                480 127 -      3123 -c---aag-------aacca-------gaa--tcctgct----gtcagtttagccagaatc-cc-ccacccttgataactgatctg---------------------------------------------------------atcatttttctc-atc--g-t-----cc---accatcccca-ggtgatatct-gatcaccc-----t-gcc-agccttcagca------------------a---g----------aat
i Galeopterus_variegatus.GalVar_scaffold_197845          I 280 I 296
s Glis_glis.GliGli_scaffold_19807                            31215 130 +     49224 -c---aag-------agcca-------gagtgtcccact--aagtcagtttagactgaac--c--ccacccttgatatctgatcca---------------------------------------------------------gtcaatttcctc-atc--c-c-----tt---gacatcctca-ggtgatatct-gatcatcc-----t-ggcctacccttag---------------------caag----------aat
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              11777 198 -     32273 cc---aag-------agcca-------gaa--acctgctaa--gtcagtttagccagaact-tc-ccgccctcaacaagtgttctgatcaatttcctcactccccacagaacctcctgcactcaacgtgtgttctg-------agcaatgtcctcactc--c-c-----cc---accatcccca-ggtgatatct-cagcactc-----tagt---gcctgcaggattctgaataagttcagaca---g----------aat
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186333925 198 + 186649187 cc---aag-------agcca-------gaa--acctgctaa--gtcagtttagccagaact-tc-ccgccctcaacaagtgttctgatcaatttcctcactccccacagaacctcctgcactcaacgtgtgttctg-------agcaatgtcctcactc--c-c-----cc---accatcccca-ggtgatatct-cagcactc-----tagt---gcctgcaggattctgaataagttcagaca---g----------aat
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   30938 127 +     78134 -c---aag-------agcca-------gag--tcctact----gtcagtttagactgaatc-g--ccacccttcatgtctgatctg---------------------------------------------------------gtcaatttcctc-atc--c-c-----tt---gacatcctca-ggtgttatct-gaccaccc-----a-ggcctactcttag---------------------caag----------aat
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 27
s Hapalemur_alaotrensis.k141_170648                           3342 145 -     19426 -c---cag-------accct-------gaa--tcctgctaa--gtcagtgtagccagattctcc-ccacccttgatatctgatctg---------------------------------------------------------atcactttcttcaatc--c-c-----catcaaccatctcca-ggtgatatct-gttccatc-----ccgcc-tgccttcagca------------------a---gcatcctagtgcat
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              8486 145 -     15286 -c---cag-------accct-------gaa--tcctgctaa--gtcagtgtagccagattctcc-ccacccttgatatctgatctg---------------------------------------------------------atcactttcctcaatc--c-c-----catcaaccatctcca-ggtgatatct-gttccatc-----ccgcc-tgccttcagca------------------a---gcatcctagtgcat
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             10124 145 +     18253 -c---cag-------accct-------gaa--tcctgctaa--gtcagtgtagccagattctcc-ccacccttgatatctgatctg---------------------------------------------------------atcactttcttcaatc--c-c-----catcaaccatctcca-ggtgatatct-attccatc-----ccgcc-tgccttcagca------------------a---gcatcctagtgcat
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         10227 145 -     41752 -c---cag-------accct-------gaa--tcctgctaa--gtcagtgtagccagattctcc-ccacccttgatatctgatctg---------------------------------------------------------atcactttcctcaatc--c-c-----catcaaccatctcca-ggtgatatct-gttccatc-----ccgcc-tgccttcagca------------------a---gcatcctagtgcat
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         10060 145 -     16460 -c---cag-------accct-------gaa--tcctgctaa--gtcagtgtagccagattctcc-ccacccttgatatctgatctg---------------------------------------------------------atcactttcctcaatc--c-c-----catcaaccatctcca-ggtgatatct-gttccatc-----ccgcc-tgccttcagca------------------a---gcatcctagtgcat
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Hoolock_leuconedys.ctg274                                    430669 148 +    630532 cc---aag-------agcca-------gaa--acctgctaa--gtcagtttagccagaacc-tc-ctgccttcaacatatgttctg---------------------------------------------------------agcaatgttctcactc--c-c-----cc---accatcccca-ggtgctatct-cagcactc-----tagt---gccgccgggattctgaataagttcagaca---g----------aat
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_307679                               13600 148 -     15490 cc---aag-------agcca-------gaa--acctgctaa--gtcagtttagccagaacc-tc-ctgccttcaacatatgttctg---------------------------------------------------------agcaatgttctcactc--c-c-----cc---accatcccca-ggtgctatct-cagcactc-----tagt---gccgccgggattctgaataagttcagaca---g----------aat
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              55606 148 +     67168 cc---aag-------agcca-------gaa--acctgctaa--gtcagtttagccagaacc-tc-ctgccttcaacatatgttctg---------------------------------------------------------agcaatgttctcactc--c-c-----cc---accatcccca-ggtgctatct-cagcactc-----tagt---gccgccgggattctgaataagttcagaca---g----------aat
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189539256 148 - 191637585 cc---aag-------agcca-------gaa--acctgctaa--gtcagtttagccagaacc-tc-ctgccttcaacatatgttctg---------------------------------------------------------agcaatgttctcactc--c-c-----cc---accatcccca-ggtgctatct-cagcactc-----tagt---gccgccgggattccgaataagttcagaca---g----------aat
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3332149 148 -  11177569 cc---aag-------agcca-------gaa--acctgctaa--gtcagtttagccagaacc-tc-ctgccttcaacatatgttctg---------------------------------------------------------agcaatgttctcactc--c-c-----cc---accatcccca-ggtgctatct-cagcactc-----tagt---gccgccgggattctgaataagttcagaca---g----------aat
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7515623 130 -   7955117 -a---aag-------aacca-------gaa--ttctact--aaatcagtttacatagaatc-c-cccagtctgaatatatgatctg---------------------------------------------------------gtcgatttcctc-atg--c-c-----cg---aacataccca-ggtgatacca-gatcacct-----t-tgactgccttcag---------------------caac----------aat
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 584
s Indri_indri.k141_3655594                                   19042 144 +     31101 -c---cag-------accct-------gaa--tcctactaa--gtcagagtagccagaatctcc-ccacccttgatacctgatctg---------------------------------------------------------atcaccttcctcaatc--c-c-----cc-cagccgtctcca-ggtgatatct-gttcaatc-----tagcc-tgcctttggca------------------a---acctcctggtgagt
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8272568 121 -   9596543 -c---aaa-------atcca-------gaa--ttctgct--acgtca-ttttgccagcatctc--ccatcctcta---------tg---------------------------------------------------------atcaatttcctt-ttcatc-c-----tt---gtggacccca-ggtgatgtct-ggtcaa-c-----t-atcctgtcttcag---------------------caag----------aac
i Jaculus_jaculus.JH725527.1                             C 0 I 26
s Lemur_catta.scaffold_24                                 15520587 145 -  30322482 -c---cag-------accct-------gaa--tcctgctaa--gtcagtgtagccagaatctcc-ccacccttgatatctgatctg---------------------------------------------------------atcactttcctcaatc--c-c-----catcaaccatctcca-ggtgatatct-gttccatc-----ctgcc-tgccttcagca------------------a---gcatcctggtgcat
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          7497 144 -     23766 -c---cag-------accct-------gaa--tcctgctaa--gtcagtataaccagaatctcc-ccacccttgatatctgatctg---------------------------------------------------------atcactttcctcgatc--c-c-----cc-cagccataccca-ggtgatctct-gttcaatc-----ccgcc-tgccttcggca------------------a---gcctcctggtgagt
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             25444 144 +     45836 -c---cag-------accct-------gaa--tcctgctaa--gtcagtataaccagaatctcc-ccacccttgatatctgatctg---------------------------------------------------------atcactttcctcgatc--c-c-----cc-cagccataccca-ggtgatctct-gttcaatc-----ccgcc-tgccttcagca------------------a---gcctcctggtgagt
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_582783                          1318 144 -      1589 -c---cag-------accct-------gaa--tcctgctac--gtcagtataaccagaatctcc-ccacccttgatatctgatctg---------------------------------------------------------atcactttcctcgatc--c-c-----cc-cagccatctcca-ggtgatctct-gttcaatc-----ccacc-tgccttcagca------------------g---gcctcctggtgagt
i Lepilemur_ruficaudatus.k141_582783                     I 4 n 144
s Lepilemur_septentrionalis.k141_185316                      23499 144 +     54090 -c---cag-------accct-------gaa--tcctgctaa--gtcagtataaccagaatctcc-ccccgcttgatatctgatctg---------------------------------------------------------atcactttcctcgatc--c-c-----cc-cagccataccca-ggtgatctct-gttcaatc-----ccgcc-tgccttcagca------------------a---gcctcctggtgagt
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Lophocebus_aterrimus.ctg367                              1433024 148 +   1826925 cc---aag-------agcca-------gaa--acctgatga--gtcggtttagccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcagtgtcctcactc--c-c-----cc---accaccccca-ggtaatatct-cagcaccc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            2030 129 +     11245 -c---aag-------cccca-------gaa--tcctgctgt--gttatgttagccaaaatctcc-ctacccttgataggtagtcag---------------------------------------------------------accccttttggccatc--c-c-----tc---a---tttccagg-tgatgtct-gttcaatc-----caacc-tgccttcagca------------------a---g----------aat
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1000867 129 +   6120653 -c---aag-------cccca-------gaa--tcctgctgt--gttatgttagccaaaatctcc-ctacccttgataggtaagcag---------------------------------------------------------accccttttggccatc--c-c-----tc---a---tttccagg-tgatgtct-gttcaatc-----caacc-tgccttcagca------------------a---g----------aat
i Loris_tardigradus.ctg83                                C 0 C 0
s Macaca_arctoides.k141_2326796                               2845 148 +     40492 cc---aag-------agcca-------gaa--acctgatga--gtcggtttagccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcagtgtcctcactc--c-c-----cc---accatcccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59672100 148 +  60120075 cc---aag-------agcca-------gaa--acctgatga--gtcggtttagccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcagtgtcctcactc--c-c-----cc---accatcccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  8600 148 -     26193 cc---aag-------agcca-------gaa--acctgatga--gtcggtttagccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcagtgtcctcactc--c-c-----cc---accatcccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            76397 148 -    114318 cc---aag-------agcca-------gaa--acctgatga--gtcggtttagccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcagtgtcctcactc--c-c-----cc---accatcccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  2112 148 -     23192 cc---aag-------agcca-------gaa--acctgatga--gtcggtttagccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcagtgtcctcactc--c-c-----cc---accatcccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                11565 148 -     29190 cc---aag-------agcca-------gaa--acctgatga--gtcggtttagccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcagtgtcctcactc--c-c-----cc---accatcccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  20132 148 +     37952 cc---aag-------agcca-------gaa--acctgatga--gttggtttagccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcagtgtcctcactc--c-c-----cc---accatcccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186835220 148 + 187317192 CC---AAG-------AGCCA-------GAA--ACCTGATGA--GTCGGTTTAGCCAGAACC-TC-CCGCCCTCAACATAAGTTCTG---------------------------------------------------------ATCAGTGTCCTCACTC--C-C-----CC---ACCATCCCCA-GGTAATATCT-CAGCACTC-----TAGT---GCCTCCAGGATTCTGAGTAAGTTCAGACA---G----------AAT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25453783 148 -  25927173 CC---AAG-------AGCCA-------GAA--ACCTGATGA--GTCGGTTTAGCCAGAACC-TC-CCGCCCTCAACATAAGTTCTG---------------------------------------------------------ATCAGTGTCCTCACTC--C-C-----CC---ACCATCCCCA-GGTAATATCT-CAGCACTC-----TAGT---GCCTCCAGGATTCTGAGTAAGTTCAGACA---G----------AAT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  75981 148 +     89720 cc---aag-------agcca-------gaa--acctgatga--gttggtttagccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcagtgtcctcactc--c-c-----cc---accatcccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 2979 148 +     20474 cc---aag-------agcca-------gaa--acctgatga--gtcggtttagccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcagtgtcctcactc--c-c-----cc---accatcccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   2780 148 -     14993 cc---aag-------agcca-------gaa--acctgatga--gtcggtttagccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcagtgtcctcactc--c-c-----cc---accatcccca-ggtaatatct-cagcactc-----tact---gcctccaggattctgagtaagttcagaca---g----------aat
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  325652 148 -    668171 cc---aag-------agcca-------gaa--acctgatga--gtcggtttagccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcagtgtcctcactc--c-c-----cc---accatcccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 1083 148 -     24072 cc---aag-------agcca-------gaa--acctgatga--gtcggtttagccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcagtgtcctcactc--c-c-----cc---accatcccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               21719 148 -     45290 cc---aag-------agcca-------gaa--acctgatga--gttggtttagccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcagtgtcctcactc--c-c-----cc---accatcccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23933267 148 -  24302211 cc---aag-------agcca-------gaa--acccgatga--gttggtttagccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcagtgtcctcactc--c-c-----cc---accaccccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               347443 148 +    752769 cc---aag-------agcca-------gaa--acccgatga--gttggtttagccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcagtgtcctcactc--c-c-----cc---accaccccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33098489 130 -  40650429 -a---aag-------aacCa-------gaa--tcctact--aaatcagtttacatagaatc-c-ccgagtctgaatatctgatctg---------------------------------------------------------gtcaatttcctc-atg--c-c-----cg---aacataccca-ggtgatacca-gatcacct-----t-tgactgccttcag---------------------caac----------aat
i Marmota_marmota.CZRN01000018.1                         C 0 I 28
s Mesocricetus_auratus.KB708134.1                         12178584 115 -  29670104 -----------------cca-------gaa--tcctgat--caaaca-tttagctagactctc--ccattcttggtctcatagctg---------------------------------------------------------atccacttcctc-act--c-t-----gc---attatcccta-ggttttgccttggtc---------t-g-----tcttcat---------------------caag----------aat
i Mesocricetus_auratus.KB708134.1                        I 9 C 0
s Microcebus_murinus.CM007674.1                           18287975 145 -  93316391 -C---CAG-------ACCCT-------GAA--TCCTGCTAA--GTCAGCATAGCCAGAATCTcc-ccacccttgatatctgatctg---------------------------------------------------------ATCACTTTCCTCGATC--CTC-----CC-TAGTCATCTCCA-GGATATCTCT-GTTCAATC-----CAGC-CTGCCTTCAGCA------------------A---GCCTCCTGGTGAGC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_534055                           5018 148 -     28506 cc---aag-------agcca-------gaa--acctgctga--gtcggtttagccagaacc-tc-ccgccctcaacataagttgtg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accaccccca-ggtaatacct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirza_zaza.k141_952172                                      5543 145 -     37649 -c---cag-------accct-------gaa--tcctgctaa--gtcagcgtagccagaatctct-ccacccttgatatctgatctg---------------------------------------------------------atcactttcctcgatc--ctc-----cc-cagtcatctcta-ggttatctct-gttcaatc-----tggcc-tgccttcagca------------------a---gcctcctggtgagc
i Mirza_zaza.k141_952172                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              3253 135 +     14296 -c---aag-------agcca-------gag--tcctact--aagtcagcttagactgaatt-c--ccacccttgatatcagatctg--------------------------------------------------ttatcaagtcaatgcccta-gtc--c-c-----tt---gatatcctca-aataatatct-gatcatcc-----t-ggccc-cccttag---------------------caag----------aat
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 30
s Nannospalax_galili.AXCS01343547.1                            498 130 +       996 -c---aag-------atcca-------gaa--acctaaa--aaatca-tttagagagaatatt--cctctctcagtgtcctaactg---------------------------------------------------------atcagtttcctc-att--c-t-----tc---atcatctcca-ggtgatgccttggtcactcagccct-g-----ccttcag---------------------caag----------aat
i Nannospalax_galili.AXCS01343547.1                      C 0 I 28
s Nasalis_larvatus.k141_413338                               11019 148 +     21681 cc---aag-------agcca-------gaa--acctgctaa--gtcggtttagccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcaatgccctcactc--c-c-----cc---accatcccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcaaaca---g----------aat
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nycticebus_bengalensis.LG01                            102575850 129 - 196305487 -c---aag-------tccca-------gaa--tcctgctgt--gttaggttaggcagaatctcc-ctacccttgataggtagtcag---------------------------------------------------------acccctattggccatc--c-c-----tc---a---tttccagg-tgatgtct-gttcaatc-----cagcc-tgccttcagca------------------a---g----------aat
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             3536 129 +      8486 -c---aag-------tccca-------gaa--tcctgctgt--gttaggttaggcagaatctcc-ctacccttgataggtagtcag---------------------------------------------------------acccctattggccatc--c-c-----tc---a---tttccagg-tgatgtct-gttcaatc-----cagcc-tgccttcagca------------------a---g----------aat
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105746277 129 + 199412804 -c---aag-------tccca-------gaa--tcctgctgt--gttaggttaggcagaatctcc-ctacctttgataggtagtcag---------------------------------------------------------acccctattggccatc--c-c-----tc---a---tttccagg-tgatgtct-gttcaatc-----cagcc-tgccttcagca------------------a---g----------aat
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   19862 114 +     28053 -----------------CCa-------gaa--tctcgat--caaatg-ttttgatagaatgtc--ccattcttggtagcataactg---------------------------------------------------------accaatttcctc-atc--c-t-----tc---attgtcccta-ggtgatgtcttggtc---------t-------tcttcag---------------------caat----------tat
i Ondatra_zibethicus.OndZib_scaffold_46174               I 9 I 434
s Onychomys_torridus.OnyTor_scaffold_2986                    75343 115 +    102263 -----------------CCa-------gaa--tcctgat--caaaca-tttagctagactctc--gcatttagggcatcatagttc---------------------------------------------------------atccatttcctc-att--c-t-----tc---attatcccta-ggtgctgtcttggtc---------t-g-----tcttcag---------------------caag----------aat
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 476
s Pan_paniscus.KQ411613.1                                    39894 198 +     80009 CC---AAG-------AGCCA-------GAa--acctgctaa--gtcagtttagccagaacT-TC-CCACCCTCAACAAGTGTTCTGATCAATTTCCTCACTCCCCACAGAACCTCCTGCACTCAACGTGTGTTCTG-------AGCAATGTCCTCACTC--C-C-----CC---ACCATCCCCA-GGTGATATCT-CAGCACTC-----TAGT---GCCTGCAGGATTCTGAATAAGTTCAGACA---G----------AAT
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03001836.1                             25811 205 +     51860 CC---AAG-------AGCCAAGAGCCAGAa--acctgctaa--gtcagtttagccagaacT-TC-CCACCCTCAACAAGTGTTCTGATCAATTTCCTCACTCCCCACAGAACCTCCTGCACTCAACGTGTGTTCTG-------AGCAATGTCCTCACTC--C-C-----CC---ACCATCCCCA-GGTGATATCT-CAGCACTC-----TAGT---GCCTGCAGGATTCTGAATAAGTTCAGACA---G----------AAT
i Pan_troglodytes.NBAG03001836.1                         I 145 I 226
s Papio_anubis.CM001495.2                                183439053 148 + 183742232 CC---AAG-------AGCCA-------GAA--ACCTGATGA--GTCGGTTTAGCCAGAACC-TC-CCGCCCTCAACATAAGTTCTG---------------------------------------------------------ATCAGTGTCCTcactc--c-c-----cc---accaccccca-ggtAATATCT-CAGCACCC-----TAGT---GCCTCCAGGATTCTGAGTAAGTTCAGACA---G----------AAT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             2746 148 +     20448 cc---aag-------agcca-------gaa--acctgatga--gtcggtttagccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcagtgtcctcactc--c-c-----cc---accaccccca-ggtaatatct-cagcaccc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20559551 148 +  20919399 cc---aag-------agcca-------gaa--acctgatga--gtcggtttagccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcagtgtcctcactc--c-c-----cc---accaccccca-ggtaatatct-cagcaccc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   1489 148 +     41871 cc---aag-------agcca-------gaa--acctgatga--gtcggtttagccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcagtgtcctcactc--c-c-----cc---accaccccca-ggtaatatct-cagcaccc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     4775 148 +     27711 cc---aag-------agcca-------gaa--acctgatga--gtcggtttagccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcagtgtcctcactc--c-c-----cc---accaccccca-ggtaatatct-cagcaccc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  4854 148 +      9205 cc---aag-------agcca-------gaa--acctgatga--gtcggtttagccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcagtgtcctcactc--c-c-----cc---accaccccca-ggtaatatct-cagcaccc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Papio_ursinus.k141_3428135                             C 0 C 0
s Perodicticus_ibeanus.k141_855320                            6032 128 +     13100 -c---aag-------tccca-------gaa--tcctgctgt--attgggttagccagaatctcc-ccacccttgataggtagtcag---------------------------------------------------------acccctgtcggccatc--c-c-----tc---t---tctcca-g-tgatgtct-gttcaatc-----caatc-tgccttcagca------------------a---g----------aat
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             4405 128 +     25941 -c---aag-------tccca-------gaa--tcctgctgt--atcgggttagccagaatctcc-ccacccttgataggtagtcag---------------------------------------------------------acccctgtcggccatc--c-c-----tc---t---tctcca-g-tgatgtct-gttcaatc-----caatc-tgccttcagca------------------a---g----------aat
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18188130 115 -  18517816 -----------------cca-------gaa--tcttggt--caaaca-tttagctagactttc--ccattcttagtattatagctg---------------------------------------------------------atccgtttcctc-att--c-t-----tc---attatcccta-ggtgctgtcttggtc---------t-g-----tcttcag---------------------caag----------aat
i Peromyscus_maniculatus.KI615324.1                      C 0 I 448
s Piliocolobus_badius.k141_1234363                           39531 143 +     62158 cc---aag-------agcca-------gaa--acctgctaa--gtcggtttagccagaacc-tc-ccgccctcaacagaagttctg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accatgccca-ggtaatatct-cagcactc-----tagt---gcctccaggaatctgagtaagttcagac------------------
i Piliocolobus_badius.k141_1234363                       C 0 I 3
s Piliocolobus_gordonorum.k141_381342                        34253 143 +     89929 cc---aag-------agcca-------gaa--acctgctaa--gtcggtttagccagaacc-tc-ccgccctcaacagaagttctg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accatgccca-gctaatatct-cagcactc-----tagt---gcctccaggaatctgagtaagttcagac------------------
i Piliocolobus_gordonorum.k141_381342                    C 0 I 3
s Piliocolobus_kirkii.k141_448987                            35669 143 +     51399 cc---aag-------agcca-------gaa--acctgctaa--gtcggtttagccagaacc-tc-ccgccctcaacagaagttctg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accatgccca-gctaatatct-cagcactc-----tagt---gcctccaggaatctgagtaagttcagac------------------
i Piliocolobus_kirkii.k141_448987                        C 0 I 3
s Piliocolobus_tephrosceles.PDMG02000141.1                14291905 143 -  14605196 CC---AAG-------AGCCA-------GAA--ACCTGCTAA--GTCGGTTTAGCCAGAACC-TC-CCGCCCTCAACAGAAGTTCTG---------------------------------------------------------ATCAATGTCCTCACtc--c-c-----cc---accatgccca-ggtaatatCT-CAGCACTC-----TAGT---GCCTCCAGGAATCTGAGTAAGTTCAGAC------------------
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 3
s Pongo_abelii.CM009266.2                                189126979 148 + 189387572 CC---AAG-------AGCCA-------GAa--acctgctaa--gtcagtttagccaGAACC-TC-CTGCCCTCAACATATGTTCTG---------------------------------------------------------AGCAATGTCCTCACTC--C-C-----CC---ACCATCCCCA-GGTGATATCT-CAGCACTC-----TAGT---ACCTGCAGGATTCTTAATAAGTTCAGACA---G----------AAT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9566585 148 +   9816681 cc---aag-------agcca-------gaa--acctgctaa--gtcagtttagccagaacc-tc-ctgccctcaacatatgttctg---------------------------------------------------------agcaatgtcctcactc--c-c-----cc---accatcccca-ggtgatatct-cagcactc-----tagt---acctgcaggattcttaataagttcagaca---g----------aat
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               69180 148 -     81375 cc---aag-------agcca-------gaa--acctgctaa--gtcggtttagccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accatcccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              1001 148 +     19060 cc---aag-------agcca-------gaa--acctgctaa--gtcggtttagccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accatcccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2593239 145 -   4620579 -C---CAG-------ACCct-------gaa--tcctgctaa--gtcagtgtAGCCAGAATCTcc-ccacccttgatatctgatctg---------------------------------------------------------ATCACTTTCCTCAATC--C-C-----CATCAACCATCTCCA-GGTGATATCT-GTTCCATC-----CCgcc-tgccttcagca------------------a---gcatCCTGGTGCAT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     987252 144 +   2598838 -C---CAG-------ACCCT-------GAA--TCCTGCTAA--GTCAAAGTAGCCAGAATCtcc-ccacccttgatatctgatctg---------------------------------------------------------ATCACTTTCCTCAATT--C-C-----CC-CAGCCATCTCCA-GGTGATATCT-GTTCAATC-----TAGC-CTGCCTTTGGCA------------------A---GCCTCCTGGTGAGT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          25541 144 +     38485 -c---cag-------accct-------gaa--tcctgctaa--gtcaaagtagccagaatctcc-ccacccttgatatctgatctg---------------------------------------------------------atcactttcctcaatt--c-c-----cc-cagccatctcca-ggtgatatct-gttcaatc-----tagcc-tgcctttggca------------------a---gccttctggtgagt
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             1700 144 +      4256 -c---cag-------accct-------gaa--tcctgctaa--gtcaaagtagccagaatctcc-ccacccttgatatctgatctg---------------------------------------------------------atcactttcctcaatt--c-c-----cc-cagccatctcca-ggtgatatct-gttcaatc-----tagcc-tgcctttggca------------------a---gcctcctggtgagt
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          23060 144 +     35766 -c---cag-------accct-------gaa--tcctgctaa--gtcaaagtagccagaatctcc-ccacccttgatatctgatctg---------------------------------------------------------atcactttcctcaatt--c-c-----tc-cagccatctcca-ggtgatatct-gttcaatc-----tagcc-tgcctttggca------------------a---gcctcctggtgagt
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           1243 144 -     24134 -c---cag-------accct-------gaa--tcctgctaa--gtcaaagtagccagaatctcc-ccacccttgatatctgatctg---------------------------------------------------------atcactttcctcaatt--c-c-----cc-cagccatctcca-ggtgatatct-gttcaatc-----tagcc-tgcctttggca------------------a---gcctcctggtgagt
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        25055 144 -     67325 -c---cag-------accct-------taa--tcctgctaa--gtcagagtagccagaatctcc-ccacccttgagatctgatctg---------------------------------------------------------atcactttcctcaatt--c-c-----cc-cagccatctcca-ggtgatatct-gttcaatc-----tagcc-tgcctttggca------------------a---gcctcctggtgagt
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           1300 144 -      6182 -c---cag-------accct-------gaa--tcctgctaa--gtcaaagtagccagaatctcc-ccacccttgatatctgatctg---------------------------------------------------------atccctttcctcaatt--c-c-----cc-cagccatctcca-ggtggtatct-gttcaatc-----tagcc-tgcctttggca------------------a---gcctccgggtgagt
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pygathrix_cinerea.k141_1153803                             11012 148 -     91421 cc---aag-------agcca-------gaa--acctgctaa--gtcggtttagccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accatcccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7605140 148 +   7812017 cc---aag-------agcca-------gaa--acctgctaa--gtcggtttagccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accatcccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10981 155 -     72585 cc---aagagccaagagcca-------gaa--acctgctaa--gtcggtttagccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accatcccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             2696 148 -     11128 cc---aag-------agcca-------gaa--acctgctaa--gtcggtttagccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accatcccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91232051 148 - 195417433 CC---AAG-------AGCCA-------GAa--acctgctaa--gtcagtttagccaGAACC-TC-CCGCCCTCAACATAAGTTCTG---------------------------------------------------------ATCAATGTCCTCACTC--C-C-----CC---ACCATCCCCA-GGTAATATCT-CAGCACTC-----TAGT---GCCTCCAGGATTCTGAGTAAGTTCAGACA---G----------AAT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7667700 148 +   7961872 cc---aag-------agcca-------gaa--acctgctaa--gtcggtttagccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accatcccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Semnopithecus_entellus.k141_11662                          15524 148 -     19888 cc---aag-------agcca-------gaa--acctgctaa--gtcggtttagccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accatcccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      22726 148 +     39453 cc---aag-------agcca-------gaa--acctgctaa--gtcggtttagccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accatcccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            3252 148 +     27826 cc---aag-------agcca-------gaa--acctgctaa--gtcggtttagccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accatcccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             2773 148 -     19483 cc---aag-------agcca-------gaa--acctgctaa--gtcggtttagccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accatcccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      2835 148 +      7198 cc---aag-------agcca-------gaa--acctgctaa--gtcggtttagccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accatcccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         11095 148 +     15514 cc---aag-------agcca-------gaa--acctgctaa--gtcggtttagccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accatcccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                     9359  92 -     12148 ----------------------------------------------------GATAGTCtctt--ccattctgagtatcatagttg---------------------------------------------------------atcaattttctc-att--c-t-----tc---tttatcccta-ggtgatgtcttggtc---------t-g-----ttttcag---------------------caag----------aat
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 I 474
s Spermophilus_dauricus.KZ294078.1                         1949271 130 -   3870691 -a---aag-------aacca-------gaa--tcctact--aaatcagtttacatagaatc-c-cccagtctgaatatatgatctg---------------------------------------------------------gtcgatttcctc-atg--c-c-----cg---aacataccca-ggtgatacca-gatcacct-----t-tgactgccttcag---------------------caac----------aat
i Spermophilus_dauricus.KZ294078.1                       C 0 I 28
s Symphalangus_syndactylus.tarseq_199                      1089300 148 -   1523678 cc---aag-------agtca-------gaa--acctgctaa--gtcagtttagccagaacc-tc-ctgccttcaacatatgttctg---------------------------------------------------------agcaatgttctcactt--c-c-----cc---accatcccca-ggtgctatct-cagcactc-----tagt---gccgccgggattctgaataagttcagaca---g----------aat
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_2201908                               11551 119 +     70052 -t---aag-------aacca-------gaa--tcttactaa--gtcaatttagccagaatc-tc-ccacctccatc---------------------------------------------------------------------caattgcctgaatc--t-c-----cc---actacccctg-agagatatct-gttcactc-----tggcc-agccttcagca------------------a---g----------aat
i Tarsius_lariang.k141_2201908                           C 0 I 25
s Tarsius_wallacei.k141_780063                               15856 119 +     25099 -t---aag-------aacca-------gaa--tcttactaa--gtcaatttagccagaatc-tc-ccacctccatc---------------------------------------------------------------------caattgcctgaatc--t-c-----cc---actacccctg-agagatatct-gttcactc-----tggcc-agccttcagca------------------a---g----------aat
i Tarsius_wallacei.k141_780063                           C 0 I 25
s Theropithecus_gelada.CM009954.1                        186424097 148 + 186847797 CC---AAG-------AGCCA-------GAA--ACCTGATGA--GTCGGTTTAGCCAGAACC-TC-CCGCCCTCAACATAAGTTCTG---------------------------------------------------------ATCAGTGTCCTcactc--c-c-----cc---accaccccca-ggtAATATCT-CAGCACCC-----TAGT---GCCTCCAGGATTCTGAGTAAGTTCAGACA---G----------AAT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          6826 148 -     20410 cc---aag-------agccg-------gaa--acctgctaa--gtcggtttagccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accatcccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    11022 148 +     15221 cc---aag-------agccg-------gaa--acctgctaa--gtcggtttcgccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accatcccca-ggtagtatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        6927 148 +     19930 cc---aag-------agccg-------gaa--acctgctaa--gtcggtttagccagaacc-tc-cagccctcaacataagttctg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accatcccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       3357 148 -     19997 cc---aag-------agcca-------gaa--acctgctaa--gtcggtttagccagaacc-tc-ctgccctcaacataagttctg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accatcccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            43476 148 -     60166 cc---aag-------agcca-------gaa--acctgctaa--gtcggtttagccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accatcccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        10947 148 -     27529 cc---aag-------agcca-------gaa--acctgctaa--gtcggtttagccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcaatgtcctcactc--c-c-----tc---accatcccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     10889 148 -     18194 cc---aag-------agcca-------gaa--acctgctaa--gtcggtttagccagaacc-cc-ctgccctcaacataagttctg---------------------------------------------------------atcaatgtcctcactc--c-g-----cc---accatcccca-ggtaatatct-cagcactc-----tagt---gcctctaggattctgagtaagttcagaca---g----------aat
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           4624 148 -     21137 cc---aag-------agcca-------gaa--acctgctaa--gtcggtttagccagaacc-tc-ctgccctcaacataagttctg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accatcccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    3327 148 -     10723 cc---aag-------agcca-------gaa--acctgctaa--gtcggtttagccagaacc-tc-ctgccctcaacataagttctg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accatcccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         2479 148 +      9834 cc---aag-------agccg-------gaa--acctgctaa--gtcggtttcgccggaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accatcccca-ggtagtatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        20798 148 +     32220 cc---aag-------agcca-------gaa--acctgctaa--gtcggtttagccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accatcccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5934894 148 +   6242583 cc---aag-------agccg-------gaa--acctgctaa--gtcggtttcgccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accatcccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        4141 148 +     20839 cc---aag-------agcca-------gaa--acctgctaa--gtcggtttagccagaacc-tc-ccgccctcaacataagttctg---------------------------------------------------------atcaatgtcctcactc--c-c-----cc---accatcccca-ggtaatatct-cagcactc-----tagt---gcctccaggattctgagtaagttcagaca---g----------aat
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2151572 122 +   4065304 -c---cag-------aacca-------gaa--tcctgct--cagtttatttggccaggatc-at-ccacccctgatatctgaactc---------------------------------------------------------atcaacttca---gtt--c-c-----tt---gctatgtcca-gatgatatct-gatcaccc-----t-ggtcagcattcatt-------------------------------------
i Tupaia_chinensis.KB320699.1                            C 0 I 13
s Tupaia_tana.TupTan_flattened_line_97126                     4888 125 -     10553 -ccctcag-------aacca-------gaa--tcctgct--cagtttattgagccaggatc-ct-ccacccttgatctcggaactc---------------------------------------------------------atcaacttca---att--c-c-----tt---gctatgtcca-ggtgatacct-gatcaccc-----t-ggtcagcattcaTT-------------------------------------
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 15
s Varecia_rubra.k141_590885                                   7920 145 +     50397 -c---caa-------accct-------gag--tcctgctaa--gtcagtgtagccagaatctcc-ccacccttgatatctgatctg---------------------------------------------------------atcactttcctcgatc--c-c-----cctcaaccatctcca-ggtgatatct-gttccatc-----ccgcc-tgccttcagca------------------a---gcatcctggtgagt
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              7975 145 +     24756 -c---cag-------accct-------gag--tcctgctaa--gtcagtgtagccagaatctcc-ccacccttgatatctgatctg---------------------------------------------------------atcactttcctcgatc--c-c-----cctcaaccatctcca-ggtgatatct-gttccatc-----ccgcc-tgccttcagca------------------a---gcatcctggtgagt
i Varecia_variegata.k141_1128296                         C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        20616 129 -     24430 -c---aaa-------aatca-------gaa--tcctact--aagtcagtttacacagaatc-c-cccaccctggatacctgatctg---------------------------------------------------------atcaatttcctc-ctg--c-c-----ca---gacataccca-ggtgatacca-g-tcaccc-----t-tgactgccttcag---------------------caac----------aat
i Xerus_inauris.XerIna_scaffold_48378                    C 0 I 28
s Zapus_hudsonius.ZapHud_scaffold_11398                      11560 129 +     63895 -c---aaa-------atcca-------gaa--tcctgct----gtca-ttttgccagaatctc--ccagcatctaagacataactg---------------------------------------------------------accaatgtccac-ctcatg-c-----tt---gtggacccca-ggtgatgtct-ggtcactc-----c-gccctgcctttag---------------------caag----------act
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 27
e Mus_spretus.CM004101.1                                  90748383 358 - 130317789 I
e Mus_musculus.chr8                                       87646309 357 - 129401213 I
e Mus_caroli.LT608237.1                                   84357336 358 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906   0 -     10935 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276   0 +     12536 C
e Zalophus_californianus.ZalCal_flattened_line_17732          2475   0 +     86975 C
e Vulpes_lagopus.VulLag_flattened_line_30954                  8219   0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5369239   0 -   5488506 C
e Ursus_maritimus.KK499267.1                               4847767   0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   52374   0 -     77625 C
e Tursiops_truncatus.MRVK01000835.1                       15738584   0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641   0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553   7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   2797   0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937   0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    384502   0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      116051   0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 70231   0 +    116680 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                 7643   0 +     41958 C
e Sus_scrofa.JH118708.1                                      32590   0 -     47482 C
e Suricata_suricatta.SurSur_flattened_line_6629              15608   0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             28038   0 +     97271 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_5840            188497   0 -    191337 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152174   0 -    313613 C
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                85541   0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        367482  20 -   3329780 I
e Rattus_norvegicus.chr16                                 53566216 434 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968   0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20271604   0 -  38429054 C
e Pteropus_vampyrus.KN525825.1                             1357630   0 +   4952924 C
e Pteropus_alecto.KB030862.1                              22974540   0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         37522   0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            12065   0 -     21811 C
e Psammomys_obesus.NESX01036370.1                             5904 349 -     21651 I
e Procavia_capensis.ProCapCap_scaffold_85530                 10240   0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090   0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823   1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384   0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813   0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690  60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9940   0 -     78924 C
e Pantholops_hodgsonii.KE114653.1                          1265385   0 -   2937107 C
e Panthera_tigris.KE722367.1                               4718322   0 -   8748460 C
e Panthera_pardus.KV860321.1                                261685   0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  148478   0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468   0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491   0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       459559   0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                        67144556   0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328  41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345   0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229   0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831   4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              503905   0 -   2017862 C
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1359220   0 +   3988456 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9146805   0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    757209   0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422   0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186877   0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33016   1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456   1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390   1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692   1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               298505   0 -  14710649 C
e Murina_feae.MurFea_scaffold_85699                           5520   1 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   32702   0 +     37127 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379  13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 138676   0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    27466   0 -    437263 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         2599   0 -      8324 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363   0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686   0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11256644 174 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009   7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961   0 +     10310 C
e Meriones_unguiculatus.MerUng_scaffold_7390                 28263 354 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365              7322   0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                         7651   0 -    207569 C
e Manis_pentadactyla.KN006162.1                              48157   0 -    317179 C
e Manis_javanica.JSZB01003497.1                              16772   0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 88359   0 +     94391 C
e Lycaon_pictus.CM007581.1                                17952544   0 -  59628241 C
e Loxodonta_africana.GL010049.1                            4214777   0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344   0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3712   0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3039763   0 +   3914936 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872  41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650   0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293   0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626   0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547   0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  41757   0 +     55795 C
e Hipposideros_galeritus.HipGal_scaffold_29171               40558   6 +     43066 I
e Hipposideros_armiger.JXIK01000431.1                       109122   6 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577   3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491   0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051   0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516   0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               239595   0 +    327341 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312   0 -    660261 C
e Galagoides_demidoff.k141_31856                              3354   0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  6829   0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20193317   0 + 205367284 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689   0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752   0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Equus_przewalskii.KK951119.1                               30446   0 +    498745 C
e Equus_caballus.CM000403.2                               18528431   0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1280610   0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2144447   1 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16326615   0 -  41312741 C
e Elephantulus_edwardii.JH947257.1                         1089268   0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347   0 +    607251 C
e Eidolon_helvum.KE759718.1                                   8270   0 +     11740 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175   0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084   0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    3324   0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  670569   0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8628495   7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076   0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            61937   0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923   0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569   0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294  44 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             25769   0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_239572              2140   5 -      5012 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 47011 110 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          11367   0 -     20389 C
e Condylura_cristata.JH655891.1                           17547123   0 -  53390261 C
e Choloepus_hoffmanni.KN194906.1                            171056   0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15957   0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498   0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            5629   0 -      6351 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_247804          3434   0 -      3715 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291   0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417   0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157   0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     90107   0 +    217609 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465   7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030   0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310   0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18497604   0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17956304   0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9032039   0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    182653   0 -    185531 C
e CanFam4.chr16                                           17796596   0 -  60362399 C
e Camelus_ferus.KB017975.1                                  400489   0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2332213   0 -   7040546 C
e Camelus_bactrianus.KN276810.1                            9999749   0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2819682   0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014   0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932   0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376   0 +  48749331 C
e Bison_bison.KN261452.1                                    200171   0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115   0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905   0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440   0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102   7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675   0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691   7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192   0 -   2318259 C
e Ailurus_fulgens.LNAC01001112.1                             76634   0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9507851   0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     66741 239 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           824607   0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       2740  8 +     62944 CC--------------------------CCTG-TA
s Acomys_cahirinus.AcoCah_scaffold_12655                     66980  5 +     87051 -----------------------------ctt-tg
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 239 I 41
s Allactaga_bullata.AllBul_scaffold_9566                     66371  4 -     89534 -----------------------------ct--tg
i Allactaga_bullata.AllBul_scaffold_9566                 I 26 I 38
s Allenopithecus_nigroviridis.k141_3361533                   10669  8 -     52922 ct--------------------------cctg-ta
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         10599  8 -     28001 ct--------------------------cctg-ta
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          1045  8 -     18505 ct--------------------------cctg-ta
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           1894  8 -     12518 ct--------------------------cctg-ta
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       8306  5 +     20879 -----------------------------cat-ta
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 28 I 40
s Arctocebus_calabarensis.k141_288239                        15927  8 +     17124 ct--------------------------ccca-ca
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Avahi_laniger.k141_765380                                  50319  8 -     92717 cc--------------------------ccca-ca
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              50948  8 +     85213 cc--------------------------ccca-ca
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Carlito_syrichta.NW_007259797.1                           142063  5 -    496798 cc--------------------------cct----
i Carlito_syrichta.NW_007259797.1                        I 78 C 0
s Castor_canadensis.CasCan_scaffold_2074                    134809  5 +    179628 -----------------------------ttt-aa
i Castor_canadensis.CasCan_scaffold_2074                 I 22 I 38
s Cephalopachus_bancanus.k141_2037105                         5970  5 -      8605 cc--------------------------cct----
i Cephalopachus_bancanus.k141_2037105                    I 70 C 0
s Cercocebus_atys.KQ010504.1                               4471627  8 +   4669795 CT--------------------------CCTG-TA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        10176  8 -     19203 ct--------------------------cctg-ta
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           4597  8 +      8260 ct--------------------------cctg-ta
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           4825  8 +     27781 ct--------------------------cctg-ta
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         4973  8 -     20310 ct--------------------------cctg-ta
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           7957  8 +     29689 at--------------------------cctg-ta
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            2393  8 +      9989 ct--------------------------cctg-ta
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          10640  8 -     27936 ct--------------------------cctg-ta
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                            10667  8 -     11289 ct--------------------------cctg-ta
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38813039  8 +  39242232 ct--------------------------cctg-ta
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21218738  8 -  21565898 ct--------------------------cctg-ta
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       35857  8 -     53127 ct--------------------------cctg-ta
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        3142  8 +      7159 at--------------------------cctg-ta
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       10660  8 -     27947 ct--------------------------cctg-tc
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         10636  8 +     17596 ct--------------------------cctg-ta
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         41137  8 -     41420 ct--------------------------cctg-ta
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Cheirogaleus_major.k141_333249                             17742  8 -     52598 cc--------------------------ccca-ca
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           13092  8 +     57038 cc--------------------------ccca-ca
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chlorocebus_aethiops.ctg25                              18424598  8 -  18827391 ct--------------------------cctg-ta
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       11040  8 -     50209 ct--------------------------cctg-ta
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135418044  8 + 135778131 CT--------------------------CCTG-TA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1906565  8 +   2368649 CT--------------------------CCTG-TA
i Colobus_angolensis.KN981557.1                          I 3 C 0
s Colobus_guereza.LG01                                   199946234  8 + 200372422 ct--------------------------cctg-ta
i Colobus_guereza.LG01                                   I 3 C 0
s Colobus_polykomos.k141_906115                              33106  8 +     84244 ct--------------------------cctg-ta
i Colobus_polykomos.k141_906115                          I 3 C 0
s Cricetulus_griseus.LT883664.1                           11664307  1 + 224834208 t----------------------------------
i Cricetulus_griseus.LT883664.1                          C 0 I 436
s Daubentonia_madagascariensis.ctg71                      12533919  8 -  12879189 ct--------------------------ccca-ca
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          16226  5 -    110024 -----------------------------ctt-tg
i Ellobius_lutescens.LOEQ01008920.1                      I 464 I 42
s Ellobius_talpinus.LOJH01109367.1                            2286  5 -      6299 -----------------------------ctt-tg
i Ellobius_talpinus.LOJH01109367.1                       I 471 I 42
s Erythrocebus_patas.Contig38                             21201241  8 -  21539334 ct--------------------------cctg-ta
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              10423  8 -     14127 ct--------------------------ccca-ca
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                3121  8 -     16928 ct--------------------------ccca-ca
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              12154  8 -     25546 ct--------------------------ccca-ca
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             9339  8 +     26330 ct--------------------------ccca-ca
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 10595  8 +     23973 ct--------------------------ccca-ca
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 9339  8 +     75513 ct--------------------------ccca-ca
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  7290  8 +     97555 ct--------------------------ccca-ca
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            10217  8 +     26496 ct--------------------------ccca-ca
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                   823  8 -     17153 ct--------------------------ccca-ca
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              10402  8 +    111500 ct--------------------------ccca-ca
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_266699                607 34 +      2098 cctgttgagtaggtttagccagaatccttcct-ca
i Galeopterus_variegatus.GalVar_scaffold_266699          I 127 C 0
s Glis_glis.GliGli_scaffold_19807                            31345  1 +     49224 c----------------------------------
i Glis_glis.GliGli_scaffold_19807                        C 0 I 100
s Gorilla_beringei.k141_3596273                              11975  8 -     32273 cc--------------------------cctg-ta
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186334123  8 + 186649187 cc--------------------------cctg-ta
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   31092  5 +     78134 -----------------------------ttt-ta
i Graphiurus_murinus.GraMur_scaffold_10447               I 27 I 36
s Hapalemur_alaotrensis.k141_170648                           3487  7 -     19426 -t--------------------------ccca-ca
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              8631  7 -     15286 -t--------------------------ccca-ca
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             10269  7 +     18253 -t--------------------------ccca-ca
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         10372  7 -     41752 -t--------------------------ccca-ca
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         10205  7 -     16460 -t--------------------------ccca-ca
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Hoolock_leuconedys.ctg274                                    430817  8 +    630532 cc--------------------------cctg-ta
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_307679                               13748  8 -     15490 cc--------------------------cctg-ta
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              55754  8 +     67168 cc--------------------------cctg-ta
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189539404  8 - 191637585 cc--------------------------cctg-ta
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3332297  8 -  11177569 cc--------------------------cctg-ta
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7516337  5 -   7955117 -----------------------------cta-ta
i Ictidomys_tridecemlineatus.JH393364.1                  I 584 I 40
s Indri_indri.k141_3655594                                   19186  8 +     31101 cc--------------------------ccca-ca
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8272715  4 -   9596543 -----------------------------ct--tg
i Jaculus_jaculus.JH725527.1                             I 26 I 38
s Lemur_catta.scaffold_24                                 15520732  8 -  30322482 ct--------------------------ccca-ca
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          7641  8 -     23766 cc--------------------------ccca-ca
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             25588  8 +     45836 cc--------------------------ccca-ca
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         32500  8 -     32627 cc--------------------------ccca-ca
i Lepilemur_ruficaudatus.k141_420445                     I 144 C 0
s Lepilemur_septentrionalis.k141_185316                      23643  8 +     54090 cc--------------------------ccca-ca
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Lophocebus_aterrimus.ctg367                              1433172  8 +   1826925 ct--------------------------cctg-ta
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            2159  8 +     11245 cc--------------------------ccca-tg
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1000996  8 +   6120653 cc--------------------------ccca-tg
i Loris_tardigradus.ctg83                                C 0 C 0
s Macaca_arctoides.k141_2326796                               2993  8 +     40492 ct--------------------------cctg-ta
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59672248  8 +  60120075 ct--------------------------cctg-ta
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  8748  8 -     26193 ct--------------------------cctg-ta
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            76545  8 -    114318 ct--------------------------cctg-ta
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  2260  8 -     23192 ct--------------------------cctg-ca
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                11713  8 -     29190 ct--------------------------cctg-ta
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  20280  8 +     37952 ct--------------------------cctg-ta
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186835368  8 + 187317192 CT--------------------------CCTG-TA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25453931  8 -  25927173 CT--------------------------CCTG-TA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  76129  8 +     89720 ct--------------------------cctg-ta
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 3127  8 +     20474 ct--------------------------cctg-ta
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   2928  8 -     14993 ct--------------------------cctg-ta
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  325800  8 -    668171 ct--------------------------cctg-ta
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 1231  8 -     24072 ct--------------------------cctg-ta
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               21867  8 -     45290 ct--------------------------cctg-ta
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23933415  8 -  24302211 ct--------------------------cctg-ta
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               347591  8 +    752769 ct--------------------------cctg-ta
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33098647  5 -  40650429 -----------------------------cta-ta
i Marmota_marmota.CZRN01000018.1                         I 28 I 40
s Meriones_unguiculatus.MerUng_scaffold_7390                 28617  6 +    140813 -----------------------------ctttgg
i Meriones_unguiculatus.MerUng_scaffold_7390             I 354 I 44
s Mesocricetus_auratus.KB708134.1                         12178699  1 -  29670104 t----------------------------------
i Mesocricetus_auratus.KB708134.1                        C 0 I 925
s Microcebus_murinus.CM007674.1                           18288120  8 -  93316391 CC--------------------------CCCA-CA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_534055                           5166  8 -     28506 ct--------------------------cctg-ta
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirza_zaza.k141_952172                                      5688  8 -     37649 cc--------------------------ccca-ca
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mus_caroli.LT608237.1                                   84357694  5 - 120012414 -----------------------------ttt-tg
i Mus_caroli.LT608237.1                                  I 358 I 23
s Mus_musculus.chr8                                       87646666  5 - 129401213 -----------------------------ttt-tg
i Mus_musculus.chr8                                      I 357 I 23
s Mus_pahari.LT608297.1                                   31350939  5 -  89631738 -----------------------------ctt-gg
i Mus_pahari.LT608297.1                                  N 0 I 23
s Mus_spretus.CM004101.1                                  90748741  5 - 130317789 -----------------------------ttt-tg
i Mus_spretus.CM004101.1                                 I 358 I 23
s Muscardinus_avellanarius.MusAve_scaffold_82313              3418  5 +     14296 -----------------------------tta-tg
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 30 I 36
s Nannospalax_galili.AXCS01343547.1                            656  5 +       996 -----------------------------ctt-tg
i Nannospalax_galili.AXCS01343547.1                      I 28 I 46
s Nasalis_larvatus.k141_413338                               11167  8 +     21681 ct--------------------------cctg-ta
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nycticebus_bengalensis.LG01                            102575979  8 - 196305487 cc--------------------------cccg-tg
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             3665  8 +      8486 cc--------------------------cccg-tg
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105746406  8 + 199412804 cc--------------------------cccg-tg
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   20410  5 +     28053 -----------------------------CTT-TG
i Ondatra_zibethicus.OndZib_scaffold_46174               I 434 I 42
s Onychomys_torridus.OnyTor_scaffold_2986                    75934  5 +    102263 -----------------------------CTT-TG
i Onychomys_torridus.OnyTor_scaffold_2986                I 476 I 42
s Pan_paniscus.KQ411613.1                                    40092  8 +     80009 CC--------------------------CCTA-TA
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189138984  8 + 189151597 CC--------------------------CCTG-TA
i Pan_troglodytes.CM009242.2                             I 217 C 0
s Papio_anubis.CM001495.2                                183439201  8 + 183742232 CT--------------------------CCTG-TA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             2894  8 +     20448 ct--------------------------cctg-ta
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20559699  8 +  20919399 ct--------------------------cctg-ta
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   1637  8 +     41871 ct--------------------------cctg-ta
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     4923  8 +     27711 ct--------------------------cctg-ta
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  5002  8 +      9205 ct--------------------------cctg-ta
i Papio_ursinus.k141_3428135                             C 0 C 0
s Perodicticus_ibeanus.k141_855320                            6160  8 +     13100 ct--------------------------ccca-ca
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             4533  8 +     25941 ct--------------------------ccca-ca
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18188693  5 -  18517816 -----------------------------att-tg
i Peromyscus_maniculatus.KI615324.1                      I 448 I 42
s Piliocolobus_badius.k141_1234363                           39677  8 +     62158 ct--------------------------cctg-ta
i Piliocolobus_badius.k141_1234363                       I 3 C 0
s Piliocolobus_gordonorum.k141_381342                        34399  8 +     89929 ct--------------------------cctg-ta
i Piliocolobus_gordonorum.k141_381342                    I 3 C 0
s Piliocolobus_kirkii.k141_448987                            35815  8 +     51399 ct--------------------------cctg-ta
i Piliocolobus_kirkii.k141_448987                        I 3 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14292051  8 -  14605196 CT--------------------------CCTG-TA
i Piliocolobus_tephrosceles.PDMG02000141.1               I 3 C 0
s Pongo_abelii.CM009266.2                                189127127  8 + 189387572 CC--------------------------CCTG-CA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9566733  8 +   9816681 cc--------------------------cctg-ca
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               69328  8 -     81375 ct--------------------------cctg-ta
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              1149  8 +     19060 ct--------------------------cctg-ta
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2593384  8 -   4620579 CT--------------------------CCCA-CA
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     987396  8 +   2598838 CT--------------------------CCCA-ca
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          25685  8 +     38485 cc--------------------------ccca-ca
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             1844  8 +      4256 cc--------------------------ccca-ca
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          23204  8 +     35766 cc--------------------------ccca-ca
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           1387  8 -     24134 cc--------------------------ccca-ca
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        25199  8 -     67325 cc--------------------------ccca-ca
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           1444  8 -      6182 cc--------------------------cccg-ca
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             6253  6 -     21651 -----------------------------cttttg
i Psammomys_obesus.NESX01036370.1                        I 349 I 44
s Pygathrix_cinerea.k141_1153803                             11160  8 -     91421 ct--------------------------cctg-ta
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7605288  8 +   7812017 ct--------------------------cctg-ta
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11136  8 -     72585 ct--------------------------cctg-ta
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53566650  5 +  90668790 -----------------------------ctt-tg
i Rattus_norvegicus.chr16                                I 434 I 42
s Rhinopithecus_bieti.k119_217274                             2844  8 -     11128 ct--------------------------cctg-ta
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91232199  8 - 195417433 CT--------------------------CCTG-TA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7667848  8 +   7961872 ct--------------------------cctg-ta
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Semnopithecus_entellus.k141_11662                          15672  8 -     19888 ct--------------------------cctg-ta
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      22874  8 +     39453 ct--------------------------cctg-ta
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            3400  8 +     27826 ct--------------------------cctg-ta
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             2921  8 -     19483 ct--------------------------cctg-ta
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      2983  8 +      7198 ct--------------------------cctg-ta
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         11243  8 +     15514 ct--------------------------cctg-ta
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                     9925  5 -     12148 -----------------------------CTT-TG
i Sigmodon_hispidus.SigHis_scaffold_60841                I 474 I 42
s Spermophilus_dauricus.KZ294078.1                         1949429  5 -   3870691 -----------------------------cta-ta
i Spermophilus_dauricus.KZ294078.1                       I 28 I 39
s Symphalangus_syndactylus.tarseq_199                      1089448  8 -   1523678 cc--------------------------cctg-ta
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_2201908                               11695  8 +     70052 cc--------------------------cctg-tg
i Tarsius_lariang.k141_2201908                           I 25 C 0
s Tarsius_wallacei.k141_780063                               16000  8 +     25099 cc--------------------------cctg-tg
i Tarsius_wallacei.k141_780063                           I 25 C 0
s Theropithecus_gelada.CM009954.1                        186424245  8 + 186847797 CT--------------------------CCTG-TA
i Theropithecus_gelada.CM009954.1                        C 0 I 322
s Trachypithecus_auratus.k141_722599                          6974  8 -     20410 ct--------------------------cctg-ta
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    11170  8 +     15221 ct--------------------------cctg-ta
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        7075  8 +     19930 ct--------------------------cctg-ta
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       3505  8 -     19997 ct--------------------------cctg-ta
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            43624  8 -     60166 ct--------------------------cctg-ta
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        11095  8 -     27529 ct--------------------------cctg-ta
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     11037  8 -     18194 ct--------------------------cctg-ta
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           4772  8 -     21137 ct--------------------------cctg-ta
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    3475  8 -     10723 ct--------------------------cctg-ta
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         2627  8 +      9834 ct--------------------------cctg-ta
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        20946  8 +     32220 ct--------------------------cctg-ta
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5935042  8 +   6242583 ct--------------------------cctg-ta
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        4289  8 +     20839 ct--------------------------cctg-ta
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Varecia_rubra.k141_590885                                   8065  8 +     50397 cc--------------------------tcca-ca
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              8120  8 +     24756 cc--------------------------tcca-ca
i Varecia_variegata.k141_1128296                         C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        20773  5 -     24430 -----------------------------ctt-ta
i Xerus_inauris.XerIna_scaffold_48378                    I 28 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      11716  4 +     63895 -----------------------------ct--tg
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 27 I 47
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zalophus_californianus.ZalCal_flattened_line_17732          2475  0 +     86975 C
e Vulpes_lagopus.VulLag_flattened_line_30954                  8219  0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5369239  0 -   5488506 C
e Ursus_maritimus.KK499267.1                               4847767  0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   52374  0 -     77625 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     5013 15 -     10553 I
e Tupaia_chinensis.KB320699.1                              2151694 13 +   4065304 I
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   2797  0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    384502  0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      116051  0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 70231  0 +    116680 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                 7643  0 +     41958 C
e Sus_scrofa.JH118708.1                                      32590  0 -     47482 C
e Suricata_suricatta.SurSur_flattened_line_6629              15608  0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             28038  0 +     97271 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_5840            188497  0 -    191337 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152174  0 -    313613 C
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                85541  0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20271604  0 -  38429054 C
e Pteropus_vampyrus.KN525825.1                             1357630  0 +   4952924 C
e Pteropus_alecto.KB030862.1                              22974540  0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         37522  0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            12065  0 -     21811 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9940  0 -     78924 C
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Panthera_tigris.KE722367.1                               4718322  0 -   8748460 C
e Panthera_pardus.KV860321.1                                261685  0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  148478  0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       459559  0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              503905  0 -   2017862 C
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1359220  0 +   3988456 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9146805  0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    757209  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186877  0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               298505  0 -  14710649 C
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   32702  0 +     37127 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 138676  0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         2599  0 -      8324 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11256644 174 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mellivora_capensis.MelCap_flattened_line_69365              7322  0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                         7651  0 -    207569 C
e Manis_pentadactyla.KN006162.1                              48157  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              16772  0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 88359  0 +     94391 C
e Lycaon_pictus.CM007581.1                                17952544  0 -  59628241 C
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3039763  0 +   3914936 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  41757  0 +     55795 C
e Hipposideros_galeritus.HipGal_scaffold_29171               40558  6 +     43066 I
e Hipposideros_armiger.JXIK01000431.1                       109122  6 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               239595  0 +    327341 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Galagoides_demidoff.k141_31856                              3354  0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  6829  0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20193317  0 + 205367284 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Equus_przewalskii.KK951119.1                               30446  0 +    498745 C
e Equus_caballus.CM000403.2                               18528431  0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1280610  0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16326615  0 -  41312741 C
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Eidolon_helvum.KE759718.1                                   8270  0 +     11740 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    3324  0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  670569  0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            61937  0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             25769  0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_239572              2140  5 -      5012 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 47011 110 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          11367  0 -     20389 C
e Condylura_cristata.JH655891.1                           17547123  0 -  53390261 C
e Choloepus_hoffmanni.KN194906.1                            171056  0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15957  0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            5629  0 -      6351 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_247804          3434  0 -      3715 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     90107  0 +    217609 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18497604  0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17956304  0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9032039  0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    182653  0 -    185531 C
e CanFam4.chr16                                           17796596  0 -  60362399 C
e Camelus_ferus.KB017975.1                                  400489  0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2332213  0 -   7040546 C
e Camelus_bactrianus.KN276810.1                            9999749  0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Ailurus_fulgens.LNAC01001112.1                             76634  0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9507851  0 -  29979442 C
e Acinonyx_jubatus.LLWD01001279.1                           824607  0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       2748 102 +     62944 CTCC---TG-----AGG---------------------T-T----TTTT-CTTC-A-TAATT-TGGC-A------CCTAC---T------GAC--------TCCC-A----CCCTTGGCTGTAAAACct-cacttg-tctctgat----------a-gatttagagctgagtccaatttctc
s Acomys_cahirinus.AcoCah_scaffold_12655                     67026  61 +     87051 ------------------------------------------------------------------------------------------------------tccta----ctcttgtttgtaaattcc-cacata-tctatgct----------a-tatttgtggctgaaccc-ag-tttc
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 41 I 33
s Allactaga_bullata.AllBul_scaffold_9566                     66413  62 -     89534 -----------------------------------------------------------------------------------------------------tccc-a----ctcttggctataaatcccccatata-tccatagg----------g-tatttggagctaaaacc-ac-tctc
i Allactaga_bullata.AllBul_scaffold_9566                 I 38 C 0
s Allenopithecus_nigroviridis.k141_3361533                   10677 102 -     52922 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cccttggctgtaaatccc-cacttg-tccctgat----------a-tatttggagctgagtccaatttcac
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         10607 102 -     28001 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cccttggctgtaaatccc-cacttg-tccctgat----------a-tatttggagctgagtccaatttcac
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          1053 102 -     18505 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cccttggctgtaaatccc-cacttg-tccctgat----------a-tatttggagctgagtccaatttcac
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           1902 102 -     12518 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cccttggctgtaaatccc-catttg-tccctgat----------a-tatttggagctgagtccaatttcac
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_2038611                             23144  41 +     24414 --------------------------------------------------------------------------------------------------------------------------------c-cacttg-cccgtgat----------g-tgtttggagctgagcccaatttgtc
i Alouatta_belzebul.k141_2038611                         N 0 C 0
s Alouatta_caraya.k141_885645                                53905  41 +     54689 --------------------------------------------------------------------------------------------------------------------------------c-cacttg-cccgtgat----------g-tgtttggagctgagcccaatttgtc
i Alouatta_caraya.k141_885645                            N 0 C 0
s Alouatta_discolor.k141_2852575                            124494  41 +    125349 --------------------------------------------------------------------------------------------------------------------------------c-cacttg-cccgtgat----------g-tgtttggagctgagcccaatttgtc
i Alouatta_discolor.k141_2852575                         N 0 C 0
s Alouatta_juara.k141_1509701                                20839  41 +     25266 --------------------------------------------------------------------------------------------------------------------------------c-cacttg-cccatgat----------g-tgtttggagctgagcccaatttctc
i Alouatta_juara.k141_1509701                            N 0 C 0
s Alouatta_macconnelli.k141_1406484                            280  41 +      2906 --------------------------------------------------------------------------------------------------------------------------------c-cacttg-cccatgat----------g-tgtttggagctgagcccaatttctc
i Alouatta_macconnelli.k141_1406484                      N 0 C 0
s Alouatta_nigerrima.k141_3472759                            14397  38 -     18578 --------------------------------------------------------------------------------------------------------------------------------c-cacttg-cccatgat----------g-tgtttggagctaa---caatttctc
i Alouatta_nigerrima.k141_3472759                        N 0 C 0
s Alouatta_palliata.k141_668256                              17098  41 +     18088 --------------------------------------------------------------------------------------------------------------------------------c-cacttg-cccgtgat----------g-tgtttggagctgagcccaatttctc
i Alouatta_palliata.k141_668256                          N 0 C 0
s Alouatta_puruensis.k141_1766044                            18149  41 -     18677 --------------------------------------------------------------------------------------------------------------------------------c-cacttg-cccatgat----------g-tgtttggagctgagcccaatttctc
i Alouatta_puruensis.k141_1766044                        N 0 C 0
s Alouatta_seniculus.k141_117119                             11131  41 +     50774 --------------------------------------------------------------------------------------------------------------------------------c-cacttg-cccatgat----------g-tgtttggagctgagcccaatttctc
i Alouatta_seniculus.k141_117119                         N 0 C 0
s Aotus_azarae.k141_3104676                                  11760  41 -     33861 --------------------------------------------------------------------------------------------------------------------------------c-cacttg-ccCCTGAC----------A-tgtttggagctgagcccagtttctc
i Aotus_azarae.k141_3104676                              N 0 C 0
s Aotus_griseimembra.k141_2240599                            11781  41 -     34016 --------------------------------------------------------------------------------------------------------------------------------c-cacttg-ccCCTGAC----------g-tgtttggagctgagcccagtttctc
i Aotus_griseimembra.k141_2240599                        N 0 C 0
s Aotus_nancymaae.KZ198451.1                               4294178  41 -   5030052 --------------------------------------------------------------------------------------------------------------------------------c-cACTTG-CCCCTGAC----------G-TGTTTGgagctgagcccagtttctc
i Aotus_nancymaae.KZ198451.1                             N 0 C 0
s Aotus_trivirgatus.k141_2152450                             11781  41 -     34685 --------------------------------------------------------------------------------------------------------------------------------c-cacttg-ccCCTGAC----------g-tgtttggagctgagcccagtttctc
i Aotus_trivirgatus.k141_2152450                         N 0 C 0
s Aotus_vociferans.k141_344750                               24903  41 -     47192 --------------------------------------------------------------------------------------------------------------------------------c-cacttg-ccCCTGAC----------g-tgtttggagctgagcccagtttctc
i Aotus_vociferans.k141_344750                           N 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       8351  61 +     20879 -----------------------------------------------------------------------------------------------------cttc-a----ttcttggccagaaattcc-caccta-tgattgct----------aatattccaagctgagctt--a-tctc
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 40 C 0
s Arctocebus_calabarensis.k141_288239                        15935  99 +     17124 ctcc---tg-----agg---------------------c-t----acct-ttt--g-tcatt-ttcc-a------tcaac---t------agc---------ccc-a----tccttgcctatcagtccc-cacctc-tccacgct----------g-g-tttggagttgagcccagtctctt
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Avahi_laniger.k141_765380                                  50327 101 -     92717 cccc---tg-----atg---------------------t-t----tcct-ctt--g-taact-gtcc-a------tccac---t------gac--------cccc-a----tccttggctgtcaatctc-cacttc-tccacact----------a-tgtttggagctgagcccaatctctc
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              50956 101 +     85213 cccc---tg-----atg---------------------t-t----tcct-ctt--g-taact-gtcc-a------tccac---t------gac--------cccc-a----tccttggctgtcaatctc-cacttc-tccacact----------a-tgtttggagctgagcccaatctctc
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             1512  41 -     10423 --------------------------------------------------------------------------------------------------------------------------------c-cacttg-cccgtgat----------g-tgtttgcagctgagcccagtttctc
i Callibella_humilis.k141_1278103                        N 0 C 0
s Callimico_goeldii.k141_1091182                             21004  41 +     31915 --------------------------------------------------------------------------------------------------------------------------------c-cccttg-cccgtgat----------g-tgtttggagctgagcccagtttctc
i Callimico_goeldii.k141_1091182                         N 0 C 0
s Callithrix_geoffroyi.k119_512088                            1479  41 +      5267 --------------------------------------------------------------------------------------------------------------------------------c-cacttg-cccgtgat----------g-tgtttgcagctgagcccagtttctc
i Callithrix_geoffroyi.k119_512088                       N 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23586691  41 - 189096842 --------------------------------------------------------------------------------------------------------------------------------c-cacttg-cccgtgat----------G-TGTTTGCAGCTGAGCCCAGTTTCTC
i Callithrix_jacchus.pat_scaffold_3                      N 0 C 0
s Callithrix_kuhlii.k119_1164682                              8223  41 -     12001 --------------------------------------------------------------------------------------------------------------------------------c-cacttg-cccgtgat----------g-tgtttgcagctgagcccagtttctc
i Callithrix_kuhlii.k119_1164682                         N 0 C 0
s Carlito_syrichta.NW_007259797.1                           142068 107 -    496798 --------g-----aag---------------------t-t----tcct-ttt--ggtaatt-ttcc-a------tGTTC---TTTTGGTAAT--------TTCC-ATGGACCAGTGGCTATGAGTCTC-TATTTG-TCCATGTT----------G-TATTTTGAGCTcagtccaatttcat
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    134852  61 +    179628 -----------------------------------------------------------------------------------------------------tccc-a----cttctggctctaaatctc-ctccta-tcaatgct----------g-tatttggagctgagccc-at-tctc
i Castor_canadensis.CasCan_scaffold_2074                 I 38 C 0
s Cebuella_niveiventris.k141_1251222                          6134  39 -     11392 --------------------------------------------------------------------------------------------------------------------------------c-cgcttg-cccgTGAt----------g-t--ttgcagctgagcccagtttctc
i Cebuella_niveiventris.k141_1251222                     N 0 C 0
s Cebuella_pygmaea.k141_1309012                               2232  39 -      7577 --------------------------------------------------------------------------------------------------------------------------------c-tgcttg-cccgTGAt----------g-t--ttgcggctgagcccagtttctc
i Cebuella_pygmaea.k141_1309012                          N 0 C 0
s Cebus_albifrons.Contig27                                25650594  17 +  26074798 --------------------------------------------------------------------------------------------------------------------------------c-cacttg-cccgTGAT----------G-----T--------------------
i Cebus_albifrons.Contig27                               N 0 C 0
s Cebus_olivaceus.k141_398305                                  171  17 +      1777 --------------------------------------------------------------------------------------------------------------------------------c-cacttg-cccgTGAT----------G-----T--------------------
i Cebus_olivaceus.k141_398305                            N 0 C 0
s Cebus_unicolor.k141_544048                                 48502  17 -     74725 --------------------------------------------------------------------------------------------------------------------------------c-cacttg-cccgTGAT----------G-----T--------------------
i Cebus_unicolor.k141_544048                             N 0 C 0
s Cephalopachus_bancanus.k141_2037105                         5975 111 -      8605 --------g-ctaaatg---------------------t-t----tcct-ttt--gataatt-ttcc-a------tattc---ttttggtaat--------ttcc-atggaccagtgactatgagtctc-tatttg-tccatgct----------g-tattttgagctcagtccaatttcat
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4471635 100 +   4669795 CTCC---TG-----AGG---------------------T-T----TTCT-GTTC-A-TAATT-TGGC-A------CCTAC---T------GAC--------TCCC-A----CCCTCAGCTGTAAATCCC-CACTTG-ACCCTGAT----------A-T--TTGGAGCTGAGTCCAAGTTCAC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        10184 100 -     19203 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----ccctcggctgtaaatccc-cacttg-accctgat----------a-t--ttggagctgagtccaagttcac
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           4605 100 +      8260 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----ccctcggctgtaaatccc-cacttg-accctgat----------a-t--ttggagctgagtccaagttcac
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           4833 100 +     27781 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----ccctcggctgtaaatccc-cacttg-accctgat----------a-t--ttggagctgagtccaagttcac
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         4981 102 -     20310 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cgctcggctgtaaatccc-gacttg-tccctgat----------a-tatttggagctgagtccaatttcac
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           7965 102 +     29689 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cgctcggctgtaaatccc-gacttg-tccctgat----------a-tatttggagctgagtccaatttcac
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            2401 102 +      9989 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cgcttggctgtaaatccc-cacttg-tccctgat----------a-tatttggagctgagtccaagttcac
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          10648 102 -     27936 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cgctcggttgtaaatccc-cacttg-tccctgat----------a-tatttggagctgagtccaatttcac
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                            10675 102 -     11289 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cccttggctataaatccc-cacttg-tccctgat----------a-tatttggagctgagtccaatttcac
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38813047 102 +  39242232 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cgctcggctgtaaatccc-cacttg-tccctgat----------a-tatttggagctgagtccaatttcac
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21218746 102 -  21565898 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cccttggctataaatccc-cacttg-tccctgat----------a-tatttggagctgagtccaatttcac
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       35865 102 -     53127 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cccttggctgtaaatccc-cacttg-tccctgat----------a-tatttggagctgagtccaatttcac
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        3150 102 +      7159 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cgctcggctgtaaatccc-cacttg-tccctgat----------a-tatttggagctgagtccaatttcac
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       10668 102 -     27947 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cccttggctgtaaatccc-cacttg-tccctgat----------a-tatttggagctgagtccaatttcac
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         10644 102 +     17596 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cccttggctataaatccc-cacttg-tccctgat----------a-tatttggagctgagtccaatttcac
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         41145 102 -     41420 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cgctcggctgtaaatccc-cacttg-tccctgat----------a-tatttggagctgagtccaagttcac
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Cheirogaleus_major.k141_333249                             17750 101 -     52598 cccc---tg-----atg---------------------t-t----tcct-ctt--g-taatt-ttcc-a------tccac---t------gac--------cccc-a----tccttggctgtcaatccc-cacttc-tccatgct----------a-tgtttggagctgagcccaatctctc
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           13100 100 +     57038 cccc---tg-----atg---------------------t-t----tcct-ctt--g-taact-ttcc-a------tccac---t------gac--------ccct-a----tccttggctgtcaatc-c-cacttc-tccatgct----------a-tgtttggagctgagcccaatctctc
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           7152  41 +     11226 --------------------------------------------------------------------------------------------------------------------------------C-CACTAG-CTCGTGAT----------G-TGTTTGGAGCTGAGCCCAGTTTGTC
i Chiropotes_albinasus.k141_2813271                      N 0 C 0
s Chlorocebus_aethiops.ctg25                              18424606 102 -  18827391 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cccttggctgtaaatccc-cacttg-tccctgat----------a-tatttggagctgagtccaatttcac
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       11048 102 -     50209 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cccttggctgtaaatccc-cacttg-tccctgat----------a-tatttggagctgagtccaatttcac
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135418052 102 + 135778131 CTCC---TG-----AGG---------------------T-T----TTCT-GTTC-A-TAATT-TGGC-A------CCTAC---T------gac--------tccc-a----cccttggctgtaaatccc-cacttg-tccctgat----------a-tatttggagctgagtccaatttcac
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1906573 102 +   2368649 CTCC---TG-----AGG---------------------T-T----TTCT-GTTC-A-TAATT-TGGC-A------CCTAC---T------GAc--------tccc-a----cccttggctgtaaatccc-cacttg-tccctgat----------a-catttggagctgagtccaatttcac
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199946242 102 + 200372422 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cccttggctgtaaatccc-cacttg-tccctgat----------a-catttggagctgagtccaatttcac
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              33114 102 +     84244 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cccttggctgtaaatccc-cacttg-tccctgat----------a-catttggagctgagtccaatttcac
i Colobus_polykomos.k141_906115                          C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12533927 101 -  12879189 cccc---tg-----atg---------------------t-t----acct-ctg--g-taatt-tttc-a------tccac---t------gac--------accc-a----tccttggctgtcgatccc-cacttc-tccatgct----------g-cttttggagcagagcccaatctgtt
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          16273  60 -    110024 ------------------------------------------------------------------------------------------------------ccc-a----ttcttgtttgtaaattct-catcta-cctatgct----------a-catttgtgattgaactc-ag-tctc
i Ellobius_lutescens.LOEQ01008920.1                      I 42 I 32
s Ellobius_talpinus.LOJH01109367.1                            2333  60 -      6299 ------------------------------------------------------------------------------------------------------ccc-a----ttcttgtttgtaaattca-catcta-cctatgct----------a-catttgtgattgaactc-ag-tctc
i Ellobius_talpinus.LOJH01109367.1                       I 42 I 32
s Erythrocebus_patas.Contig38                             21201249 102 -  21539334 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cccttggctgtaaatccc-cacttg-tccctgat----------a-tatttggagctgagtccaatttcac
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              10431 101 -     14127 gccc---cg-----agg---------------------t-t----ccct-ctt--g-taact-ttcc-a------tccac---t------gac--------cccc-a----tccttggctgtcaatccc-cacttc-tccatgct----------g-tgtttggagctgagcccaatgtctc
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                3129 101 -     16928 gccc---cg-----agg---------------------t-t----ccct-ctt--g-taact-ttcc-a------tccac---t------gac--------cccc-a----tccttggctgtcaatccc-cacttc-tccatgct----------g-tgtttggagctgagcccaatgtctc
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              12162 101 -     25546 cccc---tg-----agg---------------------t-t----ccct-ctt--g-taact-ttcc-a------tccac---t------gac--------cccc-a----tccttggctgtcaatccc-cccttc-tccatgct----------g-tgtttggagctgagaccaatgtctc
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             9347 101 +     26330 cccc---cg-----agg---------------------t-t----ccct-ctt--g-taact-ttcc-a------tccac---t------gac--------cccc-a----tccttggctgtcaatccc-cccttc-tccatgct----------g-tgtttggagctgagaccaatgtctc
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 10603 101 +     23973 gccc---cg-----agg---------------------t-t----ccct-ctt--g-taact-ttcc-a------tccac---t------gac--------cccc-a----tccttggctgtcaatccc-cacttc-tccatgct----------g-tgtttggagctgagcccaatgtctc
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 9347 101 +     75513 cctc---cg-----agg---------------------t-t----ccct-ctt--g-taact-ttcc-a------tccac---t------gac--------cccc-a----tccttggctgtcaatccc-cccttc-tccatgct----------g-tgtttggagctgagaccaatgtctc
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  7298 101 +     97555 ctcc---ca-----agg---------------------t-t----ccct-ctt--g-taact-ttcc-a------tccac---t------gac--------cccc-a----tccttggctgtcaatccc-cccttc-tccatgct----------g-tgtttggagctgagcccagtgtctc
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            10225 101 +     26496 cccc---cg-----agg---------------------t-t----ccct-ctt--g-taact-ttcc-a------tccac---t------gac--------cccc-a----tccttggctgtcaatccc-cacttc-tccatgct----------g-tgtttggagctgagcccaatgtctc
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                   831 101 -     17153 gccc---cg-----agg---------------------t-t----ccct-ctt--g-taact-ttcc-a------tccac---t------gac--------cccc-a----tcgttggctgtcaatccc-cacttc-tccatgct----------g-tgtttggagctgagcccaatgtctc
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              10410 101 +    111500 cccc---cg-----agg---------------------t-t----ccct-ctt--g-taact-ttcc-a------tccac---t------gac--------cccc-a----tccttggctgtcaatccc-cacttc-tccatgct----------g-tgtttggagctgagcccaatgtctc
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_266699                641 109 +      2098 tccc---ca-----atg---------------------t-t----tcct-ctt-gg-taatt-ttcc-a------tccgc---t------gacaccctcaacccc-a----cacttggctataaatccc-cacttt-tccatgct----------g-tatttggagctgagccc-atctctc
i Galeopterus_variegatus.GalVar_scaffold_266699          C 0 C 0
s Gorilla_beringei.k141_3596273                              11983 102 -     32273 ctcc---tg-----agg---------------------t-t----tttt-cttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cccttggctgtaaatcct-cacttg-tccctgat----------a-gatttagagctgagtccaatttctc
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186334131 102 + 186649187 ctcc---tg-----agg---------------------t-t----tttt-cttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cccttggctgtaaatcct-cacttg-tccctgat----------a-gatttagagctgagtccaatttctc
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   31133  61 +     78134 -----------------------------------------------------------------------------------------------------ctcc-a----ctcttagctataaatact-ctccta-tccatgct----------g-tattttgagctcagctc-aa-tctc
i Graphiurus_murinus.GraMur_scaffold_10447               I 36 C 0
s Hapalemur_alaotrensis.k141_170648                           3494 101 -     19426 ccct---tg-----agg---------------------t-c----ctct-ctt--g-taact-ttct-a------tccac---t------gac--------cccc-a----tccttggctgtcaatccc-cacttc-accatgct----------g-tgtttggagctgagcccaacgtctc
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              8638 101 -     15286 ccct---tg-----agg---------------------t-c----ccct-ctt--g-taact-ttct-a------tccac---t------gcc--------cccc-a----tccttggctgtcaatccc-cacttc-accacgct----------g-tgtttggagctgagcccaacgtctc
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             10276 101 +     18253 ccct---tg-----agg---------------------t-c----ctct-ctt--g-taact-ttct-a------tccac---t------gac--------cccc-a----tccttggctgtcaatccc-cacttc-accacgct----------g-tgtttggagctgagcccaacgtctc
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         10379 101 -     41752 ccct---tg-----agg---------------------t-c----ccct-ctt--g-taact-ttct-a------tccac---t------gcc--------cccc-a----tccttggctgtcaatccc-cacttc-accacgct----------g-tgtttggagctgagcccaacgtctc
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         10212 101 -     16460 ccct---tg-----agg---------------------t-c----ccct-ctt--g-taact-ttct-a------tccac---t------gcc--------cccc-a----tccttggctgtcaatccc-cacttc-accacgct----------g-tgtttggagctgagcccaacgtctc
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Hoolock_leuconedys.ctg274                                    430825 102 +    630532 ctcc---tg-----agg---------------------t-t----ttct-cttc-a-tactt-tggc-a------cctac---t------gac--------tccc-a----cccttggctgtaaatcct-ctcttt-tccctgat----------a-tatttggagctgagtccaatttctc
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_307679                               13756 102 -     15490 ctcc---tg-----agg---------------------t-t----ttct-cttc-c-taatt-tggc-a------cctac---t------gac--------tccc-a----cccttggctgtaaatcct-ctcttg-tccctgat----------a-tatttggagctgagtccaatttctc
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              55762 102 +     67168 ctcc---tg-----agg---------------------t-t----ttct-cttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cccttggctgtaaatcct-ctcttg-tccctgat----------a-tatttggagctgagtccaatttctc
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189539412 102 - 191637585 ctcc---tg-----agg---------------------t-t----ttct-cttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cccttggctgtaaatcct-ctcttg-tccctgat----------a-tatttggagctgagtccaatttctc
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3332305 102 -  11177569 ctcc---tg-----agg---------------------t-t----ttct-cttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cccttggctgtaaatcct-ctcttg-tccctgat----------a-tatttggagctgagtccaatttctc
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7516382  61 -   7955117 -----------------------------------------------------------------------------------------------------cttc-a----ttcttggtcagaaattcc-caccta-tacatact----------a-tatttggagctgagcca-aa-tatc
i Ictidomys_tridecemlineatus.JH393364.1                  I 40 C 0
s Indri_indri.k141_3655594                                   19194  99 +     31101 cccc---tg-----atg---------------------t-t----tcct-ctt--g-taact-gtcc-a------tccac---t------gac--------cccc-a----tccttgactgtcaatccc-cacttc-tccatgct----------g-t--ttggagctgagcccaatctctc
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8272757  62 -   9596543 -----------------------------------------------------------------------------------------------------tcct-g----ctcttggctataaaacccccacata-gccatgtg----------g-tatttgaagctaaaacc-ac-tctg
i Jaculus_jaculus.JH725527.1                             I 38 C 0
s Lemur_catta.scaffold_24                                 15520740 101 -  30322482 cccc---tg-----agg---------------------t-t----ccct-ctt--g-taact-ttcc-a------tccac---t------gac--------cccc-a----tccttggctgtcaatccc-cacttc-tccacgct----------g-tgtttggagctgagcccaatgtctg
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        3918  41 +     64341 --------------------------------------------------------------------------------------------------------------------------------C-Cacttg-ctcgtgat----------g-tgtttggagctgagcccaatttgtc
i Leontocebus_fuscicollis.k141_1820339                   N 0 C 0
s Leontocebus_illigeri.k141_3350179                            978  41 +      4941 --------------------------------------------------------------------------------------------------------------------------------C-Cacttg-ctcgtgat----------g-tgtttggagctgagcccaatttgtc
i Leontocebus_illigeri.k141_3350179                      N 0 C 0
s Leontocebus_nigricollis.k141_4610752                        3846  41 +     35603 --------------------------------------------------------------------------------------------------------------------------------C-Cacttg-ctcgtgat----------g-tgtttggagctgagcccaatttgtc
i Leontocebus_nigricollis.k141_4610752                   N 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    25276  41 +     38576 --------------------------------------------------------------------------------------------------------------------------------C-Cacttg-ctcgtgat----------g-tgtttggagctgagcccaatttctc
i Leontopithecus_chrysomelas.k141_1519602                N 0 C 0
s Leontopithecus_rosalia.k141_464620                         21973  41 +     66356 --------------------------------------------------------------------------------------------------------------------------------C-Cacttg-ctcgtgat----------g-tgtttggagctgagcccaatttctc
i Leontopithecus_rosalia.k141_464620                     N 0 C 0
s Lepilemur_ankaranensis.k141_596936                          7649 101 -     23766 cccc---tg-----atg---------------------t-t----tcat-ctt--g-taatt-ttcc-t------tccac---t------gac--------cccc-a----tccttggctgtctatccc-catttt-tccacact----------a-tgtttggagctgagcccagtctctc
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             25596 101 +     45836 cccc---tg-----atg---------------------t-t----tcat-ctt--g-taatt-ttcc-t------tccac---t------gac--------cccc-a----tccttggctgtctatccc-catttt-tccacact----------a-tgtttggagctgagcccagtctctc
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_420445                         32508 101 -     32627 cccc---tg-----atg---------------------t-t----tcat-ctt--g-taatt-ttcc-t------tccac---t------gac--------cccc-a----tccttggctgtcagtccc-catttt-tccacact----------a-tgtttggagctgagcccagtctttc
i Lepilemur_ruficaudatus.k141_420445                     C 0 N 0
s Lepilemur_septentrionalis.k141_185316                      23651 101 +     54090 cccc---tg-----atg---------------------t-t----tcat-ctt--g-taatt-ttcc-t------tccac---t------gac--------cccc-a----tccttggctgtctatccc-catttt-tccacact----------a-tgtttggagctgagcccagtgtctc
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Lophocebus_aterrimus.ctg367                              1433180 102 +   1826925 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cccttggctgtaaatccc-cacttg-tccctgat----------a-tatttggagctgagtccaagttcac
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            2167  99 +     11245 cccc---tg-----agg---------------------c-t----ttct-ttt--g-tcatt-ttcc-a------tcaat---t------ggc---------ccc-a----tccttacctgtcagtccc-cacctc-tccacgct----------g-c-tttggagctgagcccagtctctc
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1001004  99 +   6120653 cccc---tg-----agg---------------------c-t----ttct-ttt--g-tcatt-ttcc-a------tcaat---t------ggc---------ccc-a----tccttacctgtcagtccc-cacctc-tcctcgct----------g-c-tttggagctgagcccagtctctc
i Loris_tardigradus.ctg83                                C 0 C 0
s Macaca_arctoides.k141_2326796                               3001 102 +     40492 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cccttggctgtaaatccc-cacttg-tccctgat----------a-tagttggagctgagtccaatttcac
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59672256 102 +  60120075 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cccttggctgtaaatccc-cacttg-tccctgat----------a-tatttggagctgagtccaatttcac
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  8756 102 -     26193 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cccttggctgtaaatccc-cacttg-tccctgat----------a-tatttggagctgagtccaatttcac
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            76553 102 -    114318 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cccttggctgtaaatccc-cacttg-tccctgat----------a-tatttggagctgagtccaatttcac
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  2268 102 -     23192 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----ctcttggctgtaaatccc-cacttg-tccctgat----------a-tatttggagctgagtccaatttcac
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                11721 102 -     29190 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cccttggctgtaaatccc-cacttg-tccctgat----------a-tatttggagctgagtccaatttcac
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  20288 102 +     37952 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cccttggctgtaaatccc-cacttg-tccctgat----------a-tatttggagctgagtccaatttcac
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186835376 102 + 187317192 CTCC---TG-----AGG---------------------T-T----TTCT-GTTC-A-TAATT-TGGC-A------CCTAc---t------gac--------tccc-a----cccttggctgtaaatccc-cacttg-tccctgat----------a-tatttggagctgagtccaatttcac
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25453939 102 -  25927173 CTCC---TG-----AGG---------------------T-T----TTCT-GTTC-A-TAATT-TGGC-A------CCTAC---T------Gac--------tccc-a----cccttggctgtaaatccc-cacttg-tccctgat----------a-tatttggagctgagtccaatttcac
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  76137 102 +     89720 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cccttggctgtaaatccc-cacttg-tccctgat----------a-tatttggagctgagtccaatttcac
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 3135 102 +     20474 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cccttggctgtaaatccc-cacttg-tccctgat----------a-tatttggagctgagtccaatttcac
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   2936 102 -     14993 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cccttggctgtaaatccc-cacttg-tccctgat----------a-tatttggagctgagtccaatttcac
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  325808 102 -    668171 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cccttggctgtaaatccc-cacttg-tccctgat----------a-tatttggagctgagtccaatttcac
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 1239 102 -     24072 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cccttggctgtaaatccc-cacttg-tccctgat----------a-tatttggagctgagtccaatttcac
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               21875 102 -     45290 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cccttggctgtaaatccc-cacttg-tccctgat----------a-tatttggagctgagtccaatttcac
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23933423 102 -  24302211 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----ccctcagctgtaaatccc-cacttg-tccctgat----------a-tatttggagctgagtccaagttcac
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               347599 102 +    752769 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----ccctcagctgtaaatccc-cacttg-tccctgat----------a-tatttggagctgagtccaagttcac
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33098692  61 -  40650429 -----------------------------------------------------------------------------------------------------cttc-a----ttcttggtcagaaattcc-caccta-tacatact----------a-tatttggagctgagcca-aa-tatc
i Marmota_marmota.CZRN01000018.1                         I 40 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 28667  58 +    140813 ------------------------------------------------------------------------------------------------------ccc-a----g--tcctttgtaaattcc-caccta-cttatgct----------a-catttctggctgaaccc-ag-tctc
i Meriones_unguiculatus.MerUng_scaffold_7390             I 44 I 26
s Mico_argentatus.k141_1239457                                2058  41 -      7380 --------------------------------------------------------------------------------------------------------------------------------c-cacttg-cccgtgat----------g-tgtttgcagctgagcccagtttctc
i Mico_argentatus.k141_1239457                           N 0 C 0
s Mico_humeralifer.k141_1976199                               1128  41 +     18990 --------------------------------------------------------------------------------------------------------------------------------c-cacttg-cccgtgat----------g-tgtttgcagctgagcccagtttctc
i Mico_humeralifer.k141_1976199                          N 0 C 0
s Mico_schneideri.k141_1950671                                      2063  41 -      7356 --------------------------------------------------------------------------------------------------------------------------------c-cacttg-cccgtgat----------g-tgtttgcagctgagcccagtttctc
i Mico_schneideri.k141_1950671                                 N 0 C 0
s Microcebus_murinus.CM007674.1                           18288128  96 -  93316391 CCCC---TG-----AGG---------------------T-T----TCCT-CA---G-TAACT-TTCC-A----------C---T------GAC--------CCTC-A----TTCTTGGCTGTCAATCTC-CACTTC-TCCATGCT----------G-TGTTTGGAGCtgagcccaatctctc
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_534055                           5174 102 -     28506 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cgctcggctgtaaatccc-cacttg-tccctgat----------a-tatttggagctgagtccaatttcac
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirza_zaza.k141_952172                                      5696 101 -     37649 cccc---tg-----atg---------------------t-t----tccg-ctt--g-taact-ttcc-a------ttcac---t------gcc--------cccc-a----tccttggctgtcaatccc-cacttc-ttcatgct----------g-tgtttggagctgagcccaatctctc
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mus_caroli.LT608237.1                                   84357722  60 - 120012414 ------------------------------------------------------------------------------------------------------ccc-c----ctcttgtttgtaaattct-caccta-cctatgat----------a-catttgtggctgaaccc-ag-tctc
i Mus_caroli.LT608237.1                                  I 23 I 33
s Mus_musculus.chr8                                       87646694  56 - 129401213 ------------------------------------------------------------------------------------------------------ccc-c----ctcttgtttgtaaattct-cac-----ctatgat----------a-catttgtggctgaaccc-ag-tctc
i Mus_musculus.chr8                                      I 23 I 33
s Mus_pahari.LT608297.1                                   31350967  60 -  89631738 ------------------------------------------------------------------------------------------------------ccc-a----ctcttgtttgtaaattct-caccta-cctatgat----------a-cacttgtggctgaaccc-aa-tctc
i Mus_pahari.LT608297.1                                  I 23 I 34
s Mus_spretus.CM004101.1                                  90748769  56 - 130317789 ------------------------------------------------------------------------------------------------------ccc-c----ctcttgtttgtaaattct-cac-----ctatgat----------a-catttgtggctgaaccc-ag-tctc
i Mus_spretus.CM004101.1                                 I 23 I 33
s Muscardinus_avellanarius.MusAve_scaffold_82313              3459  61 +     14296 -----------------------------------------------------------------------------------------------------ctcc-a----ctcttacctataaatccc-cttcta-tccatgct----------g-tttttggaactcagctc-aa-tctc
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 36 C 0
s Nannospalax_galili.AXCS01343547.1                            707  59 +       996 -----------------------------------------------------------------------------------------------------ttcc-a------cttagttgtaaatccc-cactta-tccatgat----------g-tatttgaaacagaacct-ag-tctc
i Nannospalax_galili.AXCS01343547.1                      I 46 C 0
s Nasalis_larvatus.k141_413338                               11175 102 +     21681 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-g----cccttggctgtaaatccc-cacttg-tccctgat----------a-catttggagctgagtccaacttcac
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nycticebus_bengalensis.LG01                            102575987  99 - 196305487 cccc---tg-----agg---------------------c-t----ttct-ttt--g-tcatt-ttcc-a------tcaac---t------ggc---------ccc-a----tccttacctgtcagtccc-cacctc-tccacgct----------g-c-tttggagataagcccagtctctc
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             3673  99 +      8486 cccc---tg-----agg---------------------c-t----ttct-ttt--g-tcatt-ttcc-a------tcaac---t------ggc---------ccc-a----tccttacctgtcagtccc-cacctc-tccacgct----------g-c-tttggagctaagcccagtctctc
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105746414  99 + 199412804 cccc---tg-----agg---------------------c-t----ttct-ttt--g-tcatt-ttcc-a------tcaac---t------ggc---------ccc-a----tccttacctgtcagtccc-cacctc-tccacgct----------g-c-tttggagctaagcccagtctctc
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   20457  60 +     28053 ------------------------------------------------------------------------------------------------------CCC-A----TTCTTGTTCATAAATTGA-CATCTA-CCTATGCT----------A-CATTTGTGACTGAATTC-AG-TCTC
i Ondatra_zibethicus.OndZib_scaffold_46174               I 42 I 32
s Onychomys_torridus.OnyTor_scaffold_2986                    75981  70 +    102263 ------------------------------------------------------------------------------------------------------CCC-A----CTCTTGTTTGTAAATTTC-CACCTA-CCTATGCTACCTTCAGCTA-CATTTATAGCTGAACTC-AG-TCTG
i Onychomys_torridus.OnyTor_scaffold_2986                I 42 C 0
s Pan_paniscus.KQ411613.1                                    40100 102 +     80009 CTCC---TG-----Agg---------------------t-t----tttt-cttc-a-taatt-tggC-A------CCTAC---T------GAC--------TCCC-A----Cccttggctgtaaatcct-cacttg-tccctgat----------a-gatttagagctgagtccaatttctc
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189138992 102 + 189151597 CTCC---TG-----Agg---------------------t-t----tttt-cttc-a-taatt-tggC-A------CCTAC---T------GAC--------TCCC-A----Cccttggctgtaaatcct-cacttg-tccctgat----------a-gatttagagctgagtccaatttctc
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                183439209 102 + 183742232 CTCC---TG-----AGG---------------------T-T----TTCT-GCTC-A-TAATT-TGGC-A------CCTAC---T------GAC--------TCCC-A----cccttggctgtaaatccc-cacttg-tccctgat----------a-tatttggagctgagtccaagttcac
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             2902 102 +     20448 ctcc---tg-----agg---------------------t-t----ttct-gctc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cccttggctgtaaatccc-cacttg-tccctgat----------a-tatttggagctgagtccaagttcac
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20559707 102 +  20919399 ctcc---tg-----agg---------------------t-t----ttct-gctc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cccttggctgtaaatccc-cacttg-tccctgat----------a-tatttggagctgagtccaagttcac
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   1645 102 +     41871 ctcc---tg-----agg---------------------t-t----ttct-gctc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cccttggctgtaaatccc-cacttg-tccctgat----------a-tatttggagctgagtccaagttcac
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     4931 102 +     27711 ctcc---tg-----agg---------------------t-t----ttct-gctc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cccttggctgtaaatccc-cacttg-tccctgat----------a-tatttggagctgagtccaagttcac
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  5010 102 +      9205 ctcc---tg-----agg---------------------t-t----ttct-gctc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cccttggctgtaaatccc-cacttg-tccctgat----------a-tatttggagctgagtccaagttcac
i Papio_ursinus.k141_3428135                             C 0 C 0
s Perodicticus_ibeanus.k141_855320                            6168  99 +     13100 ctcc---tg-----agg---------------------c-t----acct-ttt--c-tcatt-ttcc-a------ttaac---t------gtc---------ccc-a----tccttgactatcagtccc-cacctc-tccatgct----------g-c-tttggagcttagcctggtctctt
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             4541  99 +     25941 ctcc---tg-----agg---------------------c-t----acct-ttt--c-tcatt-ttcc-a------ttaac---t------ggc---------ccc-a----tccttgcctatcagtccc-cacctc-tccatgct----------g-c-tttggagctgagcctggtctctt
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18188740  60 -  18517816 ------------------------------------------------------------------------------------------------------ccc-a----ctcttgttagtaaattcc-caccta-cctatgct----------a-catttgtagctgaactc-ag-tctc
i Peromyscus_maniculatus.KI615324.1                      I 42 I 1828
s Piliocolobus_badius.k141_1234363                           39685 102 +     62158 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cccttggctgtaaatccc-cacttg-tccctgat----------a-catttggagctgagtccaatttcac
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        34407 102 +     89929 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cccttggctgtaaatccc-cacttg-tccctgat----------a-catttggagctgagtccaatttcac
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            35823 102 +     51399 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cccttggctgtaaatccc-cacttg-tccctgat----------a-catttggagctgagtccaatttcac
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14292059 102 -  14605196 CTCC---TG-----AGG---------------------T-T----TTCT-GTTC-A-TAATT-TGGC-A------CCTAC---T------GAC--------tccc-a----cccttggctgtaaatccc-cacttg-tccctgat----------a-catttggagctgagtccaatttcac
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189127135 102 + 189387572 CTCC---TG-----AGG---------------------T-T----TTCT-CTTC-A-TAATT-TGGC-A------CCTac---t------gac--------tccc-a----cccttggctgtaaatccc-ctcttg-tccttgat----------a-tatttggagctgagtccaatttctc
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9566741 102 +   9816681 ctcc---tg-----agg---------------------t-t----ttct-cttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cccttggctgtaaatccc-ctcttg-tccttgat----------a-tatttggagctgagtccaatttctc
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               69336 102 -     81375 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-g----cccttggctgtaaatccc-cacttg-tccctgat----------a-catttggagctgagtccaatttcac
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              1157 102 +     19060 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tcct-g----cccttggctgtaaatccc-cacttg-tccctgat----------a-catttggagctgagtccaatttcac
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2593392 101 -   4620579 CCCC---TG-----AGG---------------------T-T----CCCT-CTT--G-TAact-ttcc-a------tccac---t------gac--------cccc-a----tccttggctgccaatccc-cacttc-tccatgct----------g-tgtttggagctgagcccaatgtctc
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     987404  64 +   2598838 cccc---tg-----atg---------------------t-t----tcct-ctt--g-tATCt-gtcc-a------tccac---t------gac--------cccc-a----tcCTTGGCTGTCAATCTC-CAC-------------------------------------------------
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 22
s Propithecus_coronatus.k141_347390                          25693 101 +     38485 cccc---tg-----atg---------------------t-t----tcct-ctt--g-taact-gtcc-a------tccac---t------gac--------cccc-a----tccttggctgtcaatctc-cacttc-tccacact----------a-tgtttggagctgagcccaatctgtc
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             1852 101 +      4256 cccc---tg-----atg---------------------t-t----tcct-ctt--g-taact-gtcc-a------tacac---t------gac--------cccc-a----tccttggctgtcaatctc-cacttc-tccacact----------a-tgtttggagctgagcccaatctctc
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          23212 101 +     35766 tccc---tg-----atg---------------------t-t----tcct-ctt--g-taact-gtcc-a------tacac---t------gac--------cccc-a----tccttggctgtcaatctc-cacttc-tccacact----------a-tgtttggagctgagcccaatctctc
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           1395 101 -     24134 cccc---tg-----atg---------------------t-t----tcct-ctt--g-taact-gtcc-a------tccac---t------gac--------cccc-a----tccttggctgtcaatctc-cacttc-tccacact----------a-tgtttggagctgagcccaatctctc
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        25207 101 -     67325 cccc---tg-----atg---------------------t-t----tcct-ctt--g-taact-gtcc-a------tccac---t------gac--------cccc-a----tccttggctgtcaatctc-cacttc-tccacact----------a-tgtttggagctgagcccaatctctc
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           1452 101 -      6182 cccc---tg-----atg---------------------t-t----tcct-ctt--g-taact-gtcc-a------tccac---t------gac--------cccc-a----tccttggctgtcaatctc-cacttc-tccacact----------a-tgtttggagctgagcccaatctctc
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             6303  58 -     21651 ------------------------------------------------------------------------------------------------------ccc-a----g--tcctttgtaaattct-caccta-cctatgct----------a-catttctggctgaaccc-ag-tctc
i Psammomys_obesus.NESX01036370.1                        I 44 I 26
s Pygathrix_cinerea.k141_1153803                             11168 102 -     91421 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-g----cccttggctgtaaatccc-cacttg-tccctgat----------a-catttggagctgagtccaatttcac
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7605296 102 +   7812017 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-g----cccttggctataaatccc-cacttg-tccctgat----------a-catttggagctgagtccaatttcac
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11144 102 -     72585 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-g----cccttggctataaatccc-cacttg-tccctgat----------a-catttggagctgagtccaatttcac
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53566697  61 +  90668790 ------------------------------------------------------------------------------------------------------ccc-a----ctcttgtttgtaaattct-cacttaacccatgct----------a-caactgtaactaaaccc-ag-tctc
i Rattus_norvegicus.chr16                                I 42 I 33
s Rhinopithecus_bieti.k119_217274                             2852 102 -     11128 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-g----cccttggctgtaaatccc-cacttg-tccctgat----------a-catttggagctgagtccaatttcac
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91232207 102 - 195417433 CTCC---TG-----AGG---------------------T-T----TTCT-GTTC-A-TAATT-TGGC-A------CCTAc---t------gac--------tccc-g----cccttggctgtaaatccc-cacttg-tccctgat----------a-catttggagctgagtccaatttcac
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7667856 102 +   7961872 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-g----cccttggctgtaaatccc-cacttg-tccctgat----------a-catttggagctgagtccaatttcac
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_2619299                               4176  41 -      8359 --------------------------------------------------------------------------------------------------------------------------------C-Cactag-ctcgtgat----------g-tgtttggagctgagcccaatttgtc
i Saguinus_bicolor.k141_2619299                          N 0 C 0
s Saguinus_geoffroyi.k141_1413670                            10483  41 -     13588 --------------------------------------------------------------------------------------------------------------------------------C-Cacttg-ctcgtgat----------g-tgtttggagctgagcccaatttgtc
i Saguinus_geoffroyi.k141_1413670                        N 0 C 0
s Saguinus_imperator.k141_717981                              4119  41 -      6207 --------------------------------------------------------------------------------------------------------------------------------C-Cacttg-ctcgtgat----------g-tgtttggagctgagcccaatttgtc
i Saguinus_imperator.k141_717981                         N 0 C 0
s Saguinus_inustus.k141_699149                                9846  41 +     13640 --------------------------------------------------------------------------------------------------------------------------------C-Cacttg-ctcgtgat----------g-tgtttggagctgagcccaatttgtc
i Saguinus_inustus.k141_699149                           N 0 C 0
s Saguinus_labiatus.k141_285685                               4709  41 +      8564 --------------------------------------------------------------------------------------------------------------------------------C-Cacttg-ctcgtgat----------g-tgtttggagctgagcccaatttgtc
i Saguinus_labiatus.k141_285685                          N 0 C 0
s Saguinus_midas.LG03                                    209464987  41 + 209938924 --------------------------------------------------------------------------------------------------------------------------------C-Cactag-ctcgtgat----------g-tgtttggagctgagcccaatttgtc
i Saguinus_midas.LG03                                    N 0 C 0
s Saguinus_mystax.k141_374627                                 4199  41 -      9399 --------------------------------------------------------------------------------------------------------------------------------C-Cacttg-ctcgtgat----------g-tgtttggagctgagcccaatttgtc
i Saguinus_mystax.k141_374627                            N 0 C 0
s Saguinus_oedipus.k141_63850                                 1348  41 +      3421 --------------------------------------------------------------------------------------------------------------------------------C-Cacttg-ctcgtgat----------g-tgtttggagctgagcccaatttgtc
i Saguinus_oedipus.k141_63850                            N 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119947548  41 - 121099817 --------------------------------------------------------------------------------------------------------------------------------c-cactca-cccgtgat----------g-tgtttggagctgagcccaatttctc
i Saimiri_boliviensis.NW_024100920.1                     N 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       20015  41 +     46362 --------------------------------------------------------------------------------------------------------------------------------c-cactca-cccgtgat----------g-tgtttggagctgagcccaatttctc
i Saimiri_cassiquiarensis.k141_2188234                   N 0 C 0
s Saimiri_macrodon.k141_716185                               20110  41 +     45824 --------------------------------------------------------------------------------------------------------------------------------c-cactca-cccgtgat----------g-tgtttggagctgagcccaatttctc
i Saimiri_macrodon.k141_716185                           N 0 C 0
s Saimiri_oerstedii.k141_1487881                             36726  41 -     64574 --------------------------------------------------------------------------------------------------------------------------------c-cactca-cccgtgat----------g-tgtttggagctgagcccaatttctc
i Saimiri_oerstedii.k141_1487881                         N 0 C 0
s Saimiri_sciureus.k141_1888710                              18946  41 -     19356 --------------------------------------------------------------------------------------------------------------------------------c-cactca-cccgtgat----------g-tgtttggagctgagcccaatttctc
i Saimiri_sciureus.k141_1888710                          N 0 C 0
s Saimiri_ustus.k141_1484609                                 20003  41 -     61129 --------------------------------------------------------------------------------------------------------------------------------c-cactca-cccgtgat----------g-tgtttggagctgagcccaatttctc
i Saimiri_ustus.k141_1484609                             N 0 C 0
s Sapajus_apella.ctg103                                    5419258  17 -   5703754 --------------------------------------------------------------------------------------------------------------------------------c-cacttg-cccgTGAT----------G-----T--------------------
i Sapajus_apella.ctg103                                  N 0 C 0
s Sapajus_macrocephalus.k141_351809                          54299  17 -     80660 --------------------------------------------------------------------------------------------------------------------------------c-cacttg-cccgTGAT----------G-----T--------------------
i Sapajus_macrocephalus.k141_351809                      N 0 C 0
s Semnopithecus_entellus.k141_11662                          15680 102 -     19888 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-g----cccttggctgtaaatccc-cacttg-tccctgat----------a-catttggagctgagtccaatttcac
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      22882 102 +     39453 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-g----cccttggctgtaaatccc-cacttg-tccctgat----------a-catttggagctgagtccaatttcac
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            3408 102 +     27826 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-g----cccttggctgtaaatccc-cacttg-tccctgat----------a-catttggagctgagtccaatttcac
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             2929 102 -     19483 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-g----cccttggctgtaaatccc-cacttg-tccctgat----------a-catttggagctgagtccaatttcac
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      2991 102 +      7198 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-g----cccttggctgtaaatccc-cacttg-tccctgat----------a-catttggagctgagtccaatttcac
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         11251 102 +     15514 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-g----cccttggctgtaaatccc-cacttg-tccctgat----------a-catttggagctgagtccaatttcac
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                     9972  60 -     12148 ------------------------------------------------------------------------------------------------------CTC-A----TTCTTGTTTGTAAATTAT-AATCTG-CCTGTGCT----------A-CATATGTGGCTGAACTT-AA-TCTC
i Sigmodon_hispidus.SigHis_scaffold_60841                I 42 I 27
s Spermophilus_dauricus.KZ294078.1                         1949473  56 -   3870691 -----------------------------------------------------------------------------------------------------cttc-a----ttcttggtcagaaattcc-caccta-tacatact----------a-tatttggag-----cca-aa-tatc
i Spermophilus_dauricus.KZ294078.1                       I 39 C 0
s Symphalangus_syndactylus.tarseq_199                      1089456 102 -   1523678 ctcc---tg-----agg---------------------t-t----ttct-cttc-a-taatt-tggc-a------cctac---t------gac--------tccc-a----cccttggctgtaaatccc-ctcttg-tccctgat----------a-tatttggagctgagtctaatttctc
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_2201908                               11703 110 +     70052 cccc---tg-----aag---------------------t-t----ttct-ttt--ggtaatt-tttc-a------tgttc---ttttggcaat--------ttcc-atggacaaatggctg--agtctc-tatttg-tccatgct----------g-tattttgagctcagtccaatttcat
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               16008 110 +     25099 cccc---tg-----acg---------------------t-t----ttct-ttt--ggtaatt-tttc-a------tgttc---ttttggcaat--------ttcc-atggacaaatggctg--agtctc-tatttg-tccatgct----------g-tattttgagctcagtccaatttcat
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186424575 102 + 186847797 ctcc---tG-----AGG---------------------T-T----TTCT-GTTC-A-TAATT-TGGC-A------CCTAC---T------Gac--------tccc-a----cccttggctgtaaatccc-cacttg-tccctgat----------a-tatttggagctgagtccaagttcac
i Theropithecus_gelada.CM009954.1                        I 322 C 0
s Trachypithecus_auratus.k141_722599                          6982 102 -     20410 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-g----cccttggctgtaaatccc-cacttg-tccctgat----------a-catttggagctgagtccaatttcac
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    11178 102 +     15221 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-g----cccttggctgtaaatccc-cacttg-tccctgat----------a-catttggagctgagtccaatttcac
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        7083 102 +     19930 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-g----cccttggctgtaaatccc-cacttg-tccctgat----------a-catttggagctgagtccaatttcac
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       3513 102 -     19997 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-g----cccttggctgtaaatccc-cacttg-tccctgat----------a-catttggagctgagtccaatttcac
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            43632 102 -     60166 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-g----cccttggctgtaaatccc-cacttg-tccctgat----------a-catttggagctgagtccaatttcac
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        11103 102 -     27529 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-g----cccttggctgtaaatccc-cacttg-tccctgat----------a-catttggagctgagtccaatttcac
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     11045 102 -     18194 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-g----cccttggctgtaaatccc-cacttg-tccctgat----------a-catttggagctgagtccaatttcac
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           4780 102 -     21137 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-g----cccttggctgtaaatccc-cacttg-tccctgat----------a-catttggagctgagtccaatttcac
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    3483 102 -     10723 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gat--------tccc-g----cccttggctgtaaatccc-cacttg-tccctgat----------a-catttggagctgagtccaatttcac
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         2635 102 +      9834 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tgac-a------cctac---t------gac--------tccc-g----cccttggctgtaaatccc-cgcttg-tccctgat----------a-catttggagctgagtccaatttcac
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        20954 102 +     32220 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-g----cccttggctgtaaatccc-cacttg-tccctgat----------a-catttggagctgagtccaatttcac
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5935050 102 +   6242583 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-g----cccttggctgtaaatccc-cacttg-tccctgat----------a-catttggagctgagtccaatttcac
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        4297 102 +     20839 ctcc---tg-----agg---------------------t-t----ttct-gttc-a-taatt-tggc-a------cctac---t------gac--------tccc-g----cccttggctgtaaatccc-cacttg-tccctgat----------a-catttggagctgagtccaatttcac
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Varecia_rubra.k141_590885                                   8073 100 +     50397 tcc----tg-----aag---------------------t-t----ccct-ctt--g-taact-ttct-g------tccac---t------gac--------cccc-a----tccttggctgtcaatccc-cacttc-tccacgct----------a-tgtttggagctgagcccaatgtctc
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              8128 100 +     24756 tccc---tg-----aag---------------------t-t----ccct-ctt--g-taact-ttcc-a------tccac---t------gac--------cccc-a----tccttggctgtcaatccc-cacttc-tccacgct----------a-tgtttggagctgagcc-aatgtctc
i Varecia_variegata.k141_1128296                         C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      11767  54 +     63895 ---------------------------------------------------------------------------------------------------------------ctcttggctgtaaatcccccgcata-cccatgag----------g-tattg---gctgaaacc-ac-tctc
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 47 C 0
s Xerus_inauris.XerIna_scaffold_48378                        20778  64 -     24430 ccac---tctggggtttttgtttgtttctttttttttgttt----ttgt-ttt-gg-taatt-tttcta------tctac---c--------------------------------------------------------------------------------------------------
i Xerus_inauris.XerIna_scaffold_48378                    C 0 I 57
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906   0 -     10935 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276   0 +     12536 C
e Zalophus_californianus.ZalCal_flattened_line_17732          2475   0 +     86975 C
e Vulpes_lagopus.VulLag_flattened_line_30954                  8219   0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5369239   0 -   5488506 C
e Ursus_maritimus.KK499267.1                               4847767   0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   52374   0 -     77625 C
e Tursiops_truncatus.MRVK01000835.1                       15738584   0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     5013  15 -     10553 I
e Tupaia_chinensis.KB320699.1                              2151694  13 +   4065304 I
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641   0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553   7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   2797   0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937   0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    384502   0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      116051   0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 70231   0 +    116680 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                 7643   0 +     41958 C
e Sus_scrofa.JH118708.1                                      32590   0 -     47482 C
e Suricata_suricatta.SurSur_flattened_line_6629              15608   0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             28038   0 +     97271 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_5840            188497   0 -    191337 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152174   0 -    313613 C
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                85541   0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        367482  20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968   0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20271604   0 -  38429054 C
e Pteropus_vampyrus.KN525825.1                             1357630   0 +   4952924 C
e Pteropus_alecto.KB030862.1                              22974540   0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         37522   0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            12065   0 -     21811 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10240   0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090   0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823   1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384   0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813   0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690  60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9940   0 -     78924 C
e Pantholops_hodgsonii.KE114653.1                          1265385   0 -   2937107 C
e Panthera_tigris.KE722367.1                               4718322   0 -   8748460 C
e Panthera_pardus.KV860321.1                                261685   0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  148478   0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468   0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491   0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       459559   0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                        67144556   0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328  41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345   0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229   0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831   4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              503905   0 -   2017862 C
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1359220   0 +   3988456 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9146805   0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    757209   0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422   0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186877   0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33016   1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456   1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390   1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692   1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               298505   0 -  14710649 C
e Murina_feae.MurFea_scaffold_85699                           5520   1 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   32702   0 +     37127 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379  13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 138676   0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    27466   0 -    437263 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         2599   0 -      8324 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363   0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686   0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11256644 174 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009   7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961   0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12178700 925 -  29670104 I
e Mellivora_capensis.MelCap_flattened_line_69365              7322   0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                         7651   0 -    207569 C
e Manis_pentadactyla.KN006162.1                              48157   0 -    317179 C
e Manis_javanica.JSZB01003497.1                              16772   0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 88359   0 +     94391 C
e Lycaon_pictus.CM007581.1                                17952544   0 -  59628241 C
e Loxodonta_africana.GL010049.1                            4214777   0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344   0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3712   0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3039763   0 +   3914936 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872  41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650   0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293   0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626   0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547   0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  41757   0 +     55795 C
e Hipposideros_galeritus.HipGal_scaffold_29171               40558   6 +     43066 I
e Hipposideros_armiger.JXIK01000431.1                       109122   6 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577   3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491   0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051   0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516   0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               239595   0 +    327341 C
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312   0 -    660261 C
e Galagoides_demidoff.k141_31856                              3354   0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  6829   0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20193317   0 + 205367284 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689   0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752   0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Equus_przewalskii.KK951119.1                               30446   0 +    498745 C
e Equus_caballus.CM000403.2                               18528431   0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1280610   0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2144447   1 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16326615   0 -  41312741 C
e Elephantulus_edwardii.JH947257.1                         1089268   0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347   0 +    607251 C
e Eidolon_helvum.KE759718.1                                   8270   0 +     11740 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175   0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084   0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    3324   0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  670569   0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8628495   7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076   0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            61937   0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923   0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569   0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294  44 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             25769   0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_239572              2140   5 -      5012 I
e Cricetulus_griseus.LT883664.1                           11664308 436 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 47011 110 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          11367   0 -     20389 C
e Condylura_cristata.JH655891.1                           17547123   0 -  53390261 C
e Choloepus_hoffmanni.KN194906.1                            171056   0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15957   0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498   0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            5629   0 -      6351 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_247804          3434   0 -      3715 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291   0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417   0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157   0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     90107   0 +    217609 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465   7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030   0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310   0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18497604   0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17956304   0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9032039   0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    182653   0 -    185531 C
e CanFam4.chr16                                           17796596   0 -  60362399 C
e Camelus_ferus.KB017975.1                                  400489   0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2332213   0 -   7040546 C
e Camelus_bactrianus.KN276810.1                            9999749   0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2819682   0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014   0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932   0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376   0 +  48749331 C
e Bison_bison.KN261452.1                                    200171   0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115   0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905   0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440   0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102   7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675   0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691   7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192   0 -   2318259 C
e Ailurus_fulgens.LNAC01001112.1                             76634   0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9507851   0 -  29979442 C
e Acinonyx_jubatus.LLWD01001279.1                           824607   0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       2850 63 +     62944 tccct--------------aCTGTA-----AA-ACCC-CATGGCA-GTGGTC--TCTT--T--ACCT----------ATCAAGATAAT-CCCCC----T----GAATGA--A
s Acomys_cahirinus.AcoCah_scaffold_12655                     67120 25 +     87051 ------------------------------------------------------------t--acat----------atcaaga---------tcctct----gagt--aaa
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 33 I 48
s Allactaga_bullata.AllBul_scaffold_9566                     66475 40 -     89534 tagtg-t------------actgaa-----aa-a-ccccattgca-gtaatt--c-ta--a--atct----------t----------------------------------
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 9
s Allenopithecus_nigroviridis.k141_3361533                   10779 63 -     52922 tccct--------------actgta-----aa-accc-catggca-gtggtc--tatg--t--accc----------atcaagatagt-ccccc----t----gaataa--a
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         10709 63 -     28001 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagatagt-ccccc----t----gaataa--a
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          1155 63 -     18505 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagatagt-ccccc----t----gaataa--a
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           2004 63 -     12518 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagatagt-ccccc----t----gaataa--a
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_2038611                             23185 64 +     24414 tccctc-------------actgtg-----aa-agcc-catggca-gtgatc--t--cttt--actt----------atcagtgtagg-ccccc----t----gaatga--a
i Alouatta_belzebul.k141_2038611                         C 0 C 0
s Alouatta_caraya.k141_885645                                53946 64 +     54689 tccccc-------------actgtg-----aa-agcc-catggca-gtgatc--t--cttt--actt----------atcagtgtagg-ccccc----t----gaatga--a
i Alouatta_caraya.k141_885645                            C 0 C 0
s Alouatta_discolor.k141_2852575                            124535 64 +    125349 tccctc-------------actgtg-----aa-agcc-catggca-gtgatc--t--cttt--actt----------atcagtgtagg-ccccc----t----gaatga--a
i Alouatta_discolor.k141_2852575                         C 0 C 0
s Alouatta_juara.k141_1509701                                20880 64 +     25266 tccccc-------------actgtg-----aa-agcc-catggca-gtgatc--t--cttt--actt----------atcaaggtagg-ccccc----t----gaatga--a
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                            321 64 +      2906 tccccc-------------actgtg-----aa-agcc-catggca-gtgatc--t--cttt--actt----------atcaaggtagg-ccccc----t----gaatga--a
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            14435 64 -     18578 tccccc-------------actgtg-----aa-agcc-catggca-gtgatc--t--cttt--actt----------accaaggtagg-ccccc----t----gaatga--a
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_668256                              17139 64 +     18088 tccccc-------------actgtg-----aa-agcc-catggca-gtgatc--t--cttt--actt----------atcaaggtagg-ccgcc----t----gaatga--a
i Alouatta_palliata.k141_668256                          C 0 C 0
s Alouatta_puruensis.k141_1766044                            18190 64 -     18677 tccccc-------------actgtg-----aa-agcc-catggca-gtgatc--t--cttt--actt----------atcaaggtagg-ccccc----t----gaatga--a
i Alouatta_puruensis.k141_1766044                        C 0 C 0
s Alouatta_seniculus.k141_117119                             11172 64 +     50774 tccccc-------------actgtg-----aa-agcc-catggca-gtgatc--t--cttt--actt----------atcaaggtagg-ccccc----t----gaatga--a
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  11801 64 -     33861 tccccc-------------actgtg-----aa-agcc-caaggca-gtgatc--t--c--tttactt----------atcaaggtagg-tcccc----t----gaatga--a
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            11822 64 -     34016 tccccc-------------actgtg-----aa-agcc-caaggca-gtgatc--t--c--tttactt----------atcaaggtagg-ccccc----t----gaatga--a
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4294219 62 -   5030052 tccccc-------------actgtg-----aa-agcc-caaggca-gtgatc--t--c--T--ACTT----------ATCAAGGTAGG-CCCCC----T----GAATGA--A
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             11822 64 -     34685 tccccc-------------actgtg-----aa-agcc-caaggca-gtgatc--t--c--tttactt----------atcaaggtagg-ccccc----t----gaatga--a
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               24944 64 -     47192 tccccc-------------actgtg-----aa-agcc-caaggca-gtgatc--t--c--tttactt----------atcaaggtagg-ccccc----t----gaatga--a
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       8412 62 +     20879 acctc-t------------acagta-----aa-a-ccttaactca-gaagtc--ccta--a--acct----------atcaatagagt-tccca----t----gaat----a
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        16034 62 +     17124 tcccc-t------------tctgca-----ga-gtcc-tgctgtg-gttgtc--ccta--t--ctgt----------gtcaag-cag--catcc----t----gaagta--a
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Avahi_laniger.k141_765380                                  50428 64 -     92717 tcccc-t------------actgca-----aa-gccc-tgttgtg-gtagtc--ccta--c--acct----------gtcaagatagt-ccccc----t----gaatta--a
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              51057 64 +     85213 tcccc-t------------actgca-----aa-gccc-tgttgtg-gtagtc--ccta--c--acct----------gtcaagatagt-ccccc----t----gaatta--a
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             1553 64 -     10423 tccccc-------------accgtg-----aa-agcc-catggca-gtgatc--t--cttt--gctt----------atcaaggtagg-ccccc----t----gaatta--a
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             21045 64 +     31915 tccccc-------------actgtg-----aa-agct-cttggca-gtgatc--t--cttt--actt----------atcaaggtagg-ccccc----t----gaatga--a
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            1520 64 +      5267 tccccc-------------accgtg-----aa-agcc-catggca-gtgatc--t--cttt--gctt----------atcaaggtagg-ccccc----t----gaatga--a
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23586732 64 - 189096842 TCCCC-------------CACCGTG-----AA-AGCC-CATGGCA-GTGATC--T--CTTT--GCTT----------ATCAAGGTAGG-CCCCC----T----GAATGA--A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              8264 64 -     12001 tccccc-------------accgtg-----aa-agcc-catggca-gtgatc--t--cttt--gctt----------atcaaggtagg-ccccc----t----gaatga--a
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Carlito_syrichta.NW_007259797.1                           142175 61 -    496798 tcttc-t------------actaCA-----AA-GCCA-CATTGCA-GC---C--TCTA--T--ATCT----------TTCCAAATAGT-CCTTC----T----GAATGA--A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    134913 56 +    179628 tgctc-t------------actgaa-----aa-a-ccttattgca-gtagtc--ctta--t--actt----------accaaga---A-TCCCA----T----GA-------
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 5
s Cebuella_niveiventris.k141_1251222                          6173 64 -     11392 tccccc-------------accatg-----aa-agcc-catggca-gtgatc--t--cttt--gctt----------atcaaggtagg-ccccc----t----gaatga--a
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               2271 64 -      7577 tccccc-------------accatg-----aa-agcc-catggca-gtgatc--t--cttt--gctt----------atcaaggtagg-ccccc----t----gaatga--a
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         6086 61 -      8605 tcccc-t------------actaca-----aa-gcca-cattgca-gc---c--tcta--t--atct----------tcccaaatagt-ccttc----t----gaatga--a
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4471735 63 +   4669795 TCCCT--------------ACTGTA-----AA-ACCC-CATGGCA-GTGGTC--TCTG--T--ACCT----------ATCAAGGTAGT-CCCCC----T----GAATAA--A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        10284 63 -     19203 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaaggtagt-ccccc----t----gaataa--a
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           4705 63 +      8260 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaaggtagt-ccccc----t----gaataa--a
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           4933 63 +     27781 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaaggtagt-ccccc----t----gaataa--a
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         5083 63 -     20310 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagatagt-ccccc----t----gaataa--a
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           8067 63 +     29689 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagatagt-cccct----t----gaataa--a
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            2503 63 +      9989 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagatagt-ccccc----t----gaataa--a
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          10750 63 -     27936 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagatagt-ccccc----t----gaataa--a
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                            10777 63 -     11289 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagatagt-ccccc----t----gaataa--a
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38813149 63 +  39242232 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagatagt-ccccc----t----gaataa--a
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21218848 63 -  21565898 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagatagt-ccccc----t----gaataa--a
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       35967 63 -     53127 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagatagt-ccccc----t----gaataa--a
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        3252 63 +      7159 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagatagt-ccccc----t----gaataa--a
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       10770 63 -     27947 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagatagt-ccccc----t----gaataa--a
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         10746 63 +     17596 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagatagt-ccccc----t----gaataa--a
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         41247 63 -     41420 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagatagt-ccccc----t----gaataa--a
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Cheirogaleus_major.k141_333249                             17851 64 -     52598 tcccc-t------------actgca-----aa-gtcc-cactgtg-gtagtc--ccta--c--acct----------atcaagatagt-tcccc----t----gaatta--a
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           13200 64 +     57038 tcccc-t------------actgca-----aa-gccc-cactgtg-gtagtc--ccta--c--acct----------gtcaagataat-tcccc----t----gaatta--a
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           7193 63 +     11226 TCCCC-------------CAGTGTG-----AA-AGCC--ATGGCA-GTGATCTGT--T--T--ACTT----------ACCAAGGTAGG-CCCCC----T----GAATGA--A
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18424708 63 -  18827391 tccct--------------actgta-----aa-accc-catggca-gtggtc--tccg--t--acct----------atcaagatagt-ccccc----t----gaataa--a
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       11150 63 -     50209 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagatagt-ccccc----t----gaataa--a
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135418154 63 + 135778131 tccct--------------actgta-----aa-accc-catggca-gtggtc--tccg--t--acct----------atcaagatAGT-CCCCC----T----GAATAA--A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1906675 63 +   2368649 tccct--------------actgta-----aa-accc-cagggca-gtggtc--tctg--t--acct----------atcaagatagt-ccCGC----T----GAATAA--A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199946344 63 + 200372422 tccct--------------actgta-----aa-accc-cagggca-gtggcc--tctg--t--acct----------atcaagatagt-ccccc----t----gaataa--a
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              33216 63 +     84244 tccct--------------actgta-----aa-accc-cagggca-gtggtc--tctg--t--acct----------atcaagatagt-ccccc----t----gaataa--a
i Colobus_polykomos.k141_906115                          C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12534028 64 -  12879189 ccccc-t------------actgaa-----aa-gccc-cattgtg-gtggtc--ccta--c--acct----------atcaagatagt-ccccc----t----gaattt--a
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          16365 25 -    110024 ------------------------------------------------------------t--acct----------attaaga---------ttctct----gagt--gaa
i Ellobius_lutescens.LOEQ01008920.1                      I 32 I 50
s Ellobius_talpinus.LOJH01109367.1                            2425 25 -      6299 ------------------------------------------------------------t--acct----------attaaga---------ttctct----gagt--gaa
i Ellobius_talpinus.LOJH01109367.1                       I 32 I 50
s Erythrocebus_patas.Contig38                             21201351 63 -  21539334 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--gcct----------atcaagatagt-ccccc----t----gaataa--a
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              10532 64 -     14127 tcccc-t------------actgca-----aa-gacc-tgttgtg-gtagtc--ccta--c--acct----------gtcaagacagt-ccccc----t----caatta--a
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                3230 64 -     16928 tcccc-t------------actgca-----aa-gacc-cgttgtg-gtagtc--ccta--c--acct----------gtcaagacagt-ccccc----t----caatta--a
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              12263 64 -     25546 tcccc-t------------actgca-----aa-gccc-cgttgtg-gtagtc--ccta--c--acct----------gtcaagacagt-ccccc----t----caatta--a
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             9448 64 +     26330 tcccc-t------------actgca-----aa-gccc-cattgta-gtagtc--ccta--c--acct----------gtcaagacagt-ccccc----t----caatta--a
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 10704 64 +     23973 tcccc-t------------actgca-----aa-gctc-cgttgtg-gtagtc--ccta--c--acct----------gtcaagacagt-ccccc----t----caatta--a
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 9448 64 +     75513 tcccc-t------------actgca-----aa-gccc-cgttgtg-gtagtc--ccta--c--acct----------gtcaagacagt-gcccc----t----caatta--a
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  7399 64 +     97555 tcccc-t------------actgca-----aa-gccc-cgttgtg-gtagtc--ccta--c--acct----------gtcaagacagt-ccccc----t----caatta--a
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            10326 64 +     26496 tcccc-t------------actgta-----aa-gccc-cgttgtg-gtagtc--ccta--t--acct----------gtcaagacagt-ccccc----t----caatta--a
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                   932 64 -     17153 tcccc-t------------gctgca-----aa-gacc-cgttgtg-gtagtc--ccta--c--acct----------gtcaagacagt-ccccc----t----caatta--a
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              10511 60 +    111500 tcccc-t------------actgca-----aa-gccc-cgttgtg-gtagtc--ccta--c--acct----------gtcaagacagt-ccccc----t----c----a--a
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_266699                750 63 +      2098 ttcccc-------------actgca-----aa-a-cc-cattgca-ggagtc--ccta--t--gcct----------atcaagatagt-ccccc----t----gaataa--a
i Galeopterus_variegatus.GalVar_scaffold_266699          C 0 C 0
s Gorilla_beringei.k141_3596273                              12085 63 -     32273 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctt--t--acct----------atgaagataat-ccccc----t----gaatga--a
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186334233 63 + 186649187 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctt--t--acct----------atcaagataat-ccccc----t----gaatga--a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   31194 62 +     78134 tcccc-t------------actgta-----aa-a-cctcattgca-gtagtc--ccta--t--acct----------atcaagatcac-tcccc----t----gaat----a
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           3595 64 -     19426 tcccc-t------------actgca-----ga-gccc-cgttgtg-gtagtc--cgta--c--acct----------gtcaagacagt-ccccc----t----caatta--a
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              8739 64 -     15286 tcccc-t------------actgca-----ga-gccc-cgttgtg-gtagtc--cgta--c--atct----------gtcaagacagt-ccccc----t----caatta--a
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             10377 64 +     18253 tcccc-t------------actgca-----ga-gccc-cgttgtg-gtagtc--cgta--c--acct----------gtcaagacagt-ccccc----t----caatta--a
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         10480 64 -     41752 tcccc-t------------actgca-----ga-gccc-cgttgtg-gtagtc--cgta--c--atct----------gtcaagacagt-ccccc----t----caatta--a
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         10313 64 -     16460 tcccc-t------------actgca-----ga-gccc-cgttgtg-gtagtc--cgta--c--acct----------gtcaagacagt-ccccc----t----caatta--a
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Hoolock_leuconedys.ctg274                                    430927 63 +    630532 tccct--------------actgta-----aa-gccc-catggca-gtggtc--tctt--t--acct----------atcaagatagt-ccccc----t----gaatga--a
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_307679                               13858 63 -     15490 tcact--------------actgta-----aa-gccc-catggca-gtggtc--tctt--t--acct----------gtcaagatagt-ccccc----t----gaatga--a
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              55864 63 +     67168 tcact--------------actgta-----aa-gccc-catggca-gtggtc--tctt--t--acct----------atcaagatagt-ccccc----t----gaatga--a
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189539514 63 - 191637585 tcact--------------actgta-----aa-gccc-catggca-gtggtc--tctt--t--acct----------atcaagatagt-ccccc----t----gaatga--a
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3332407 63 -  11177569 tcact--------------actgta-----aa-gccc-catggca-gtggtc--tctt--t--acct----------atcaagatagt-ccccc----t----gaatga--a
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7516443 64 -   7955117 acctc-t------------actgca-----ga-a-tatcattgca-gaagtc--ccaa--a--acct----------attgagatagt-tcctc----t----gaat--aaa
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   19293 64 +     31101 tcccc-t------------actaca-----aa-gccc-cattgtg-gtagtc--ccta--a--acct----------gtcaagatagt-ccccc----t----gaatta--a
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8272819 40 -   9596543 tgctc-t------------actgca-----aa-a-ccccattgca-gtaatt--c-ta--c--atct----------c----------------------------------
i Jaculus_jaculus.JH725527.1                             C 0 I 7
s Lemur_catta.scaffold_24                                 15520841 64 -  30322482 acccc-t------------actgca-----ga-gccc-cgttgtg-gtagtc--ccta--t--acct----------gtcaagacagt-cccgc----t----caatta--a
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        3959 64 +     64341 tccccc-------------actgtg-----aa-agcc-catggca-gtgatc--t--cttt--actt----------accaaggtagg-ccccc----t----gaatga--a
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           1019 64 +      4941 tccccc-------------actgtg-----aa-agcc-catggca-gtgatc--t--cttt--actt----------accaaggtagg-ccccc----t----gaatga--a
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        3887 64 +     35603 tccccc-------------actgtg-----aa-agcc-catggca-gtgatc--t--cttt--actt----------accaaggtagg-ccccc----t----gaatga--a
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    25317 64 +     38576 tccccc-------------actgtg-----aa-agcc-catggca-gtgatc--t--cttt--gctt----------atcaaggtagg-ccccc----t----gaatga--a
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         22014 64 +     66356 tccccc-------------actgtg-----aa-agcc-catggca-gtgatc--t--cttt--actt----------atcaaggtagg-ccccc----t----gaatga--a
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          7750 64 -     23766 ttccc-t------------actgca-----aa-gccc-cattgtg-gcaatc--ccta--c--acct----------gtcaagatagt-tcccc----t----gaatta--a
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             25697 64 +     45836 ttccc-t------------actgca-----aa-gccc-cattgtg-gcagtc--ccta--c--acct----------gtcaagatagt-tcccc----t----gaatta--a
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_320948                             0 23 -      1719 ------------------------------------------------------------------------------TAAAGATAAT-TCCcc----t----gaatta--a
i Lepilemur_ruficaudatus.k141_320948                     N 0 C 0
s Lepilemur_septentrionalis.k141_185316                      23752 64 +     54090 ttccc-t------------actgca-----aa-gccc-cattgtg-gcagtc--ccta--c--acct----------gtcaagatagt-tcccc----t----gaatta--a
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Lophocebus_aterrimus.ctg367                              1433282 63 +   1826925 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagatagt-ccccc----t----gaataa--a
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            2266 62 +     11245 tcccc-t------------tctgca-----ga-gtcc-cgctgtg-gttgtc--tcta--c--ctct----------gtcaag-caa--ccccc----c----gaagta--a
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1001103 62 +   6120653 tcccc-t------------tctgca-----ga-gtcc-cgctgtg-gttgtc--tcta--c--ctct----------gtcaag-caa--ccccc----c----gaagta--a
i Loris_tardigradus.ctg83                                C 0 C 0
s Macaca_arctoides.k141_2326796                               3103 63 +     40492 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagatagt-ccccc----t----gaataa--a
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59672358 63 +  60120075 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagatagt-ccccc----t----gaataa--a
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  8858 63 -     26193 tccct--------------actgta-----aa-atcc-catggca-gtggtc--tctg--t--acct----------atcaagatagt-ccccc----t----gaataa--a
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            76655 63 -    114318 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagatagt-ccccc----t----gaataa--a
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  2370 63 -     23192 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagatagt-ccccc----t----gaataa--a
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                11823 63 -     29190 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagatagt-ccccc----t----gaataa--a
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  20390 63 +     37952 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagatagt-ccccc----t----gaataa--a
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186835478 63 + 187317192 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagatagt-ccCCC----T----GAATAA--A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25454041 63 -  25927173 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagatagt-ccCCC----T----GAATAA--A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  76239 63 +     89720 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagatagt-ccccc----t----gaataa--a
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 3237 63 +     20474 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagatagt-ctccc----t----gaataa--a
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   3038 63 -     14993 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagatagt-ccccc----t----gaataa--a
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  325910 63 -    668171 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagatagt-ccccc----t----gaataa--a
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 1341 63 -     24072 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagatagt-ccccc----t----gaataa--a
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               21977 63 -     45290 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagatagt-ccccc----t----gaataa--a
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23933525 63 -  24302211 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaaggtagt-ccccc----t----gaataa--a
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               347701 63 +    752769 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaaggtagt-ccccc----t----gaataa--a
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33098753 64 -  40650429 acctc-t------------actgca-----aa-a-tatcattgca-gaagtc--ccga--a--acct----------attgagatagt-tcccc----t----gaat--aaa
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 28751 25 +    140813 ------------------------------------------------------------c--acct----------atcaaga---------tcctgt----gaat--aaa
i Meriones_unguiculatus.MerUng_scaffold_7390             I 26 I 46
s Mico_argentatus.k141_1239457                                2099 64 -      7380 tccccc-------------accgtg-----aa-agcc-catggca-gtgatc--t--cttt--gctt----------atcaaggtagg-ccccc----t----gaatga--a
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               1169 64 +     18990 tccccc-------------accgtg-----aa-agcc-catggca-gtgatc--t--cttt--gctt----------atcaacgtagg-ccccc----t----gaatga--a
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      2104 64 -      7356 tccccc-------------accgtg-----aa-agcc-catggca-gtgatc--t--cttt--gctt----------atcaaggtagg-ccccc----t----gaatga--a
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18288224 64 -  93316391 tcccc-t------------actgCA-----AA-GCCC-CGTTGTG-ATAGTC--CCTA--C--ACCT----------GTCAAGATAGT-CCCCC----T----GAATGa--a
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_534055                           5276 63 -     28506 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagatagt-ccccc----t----gaatga--a
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirza_zaza.k141_952172                                      5797 62 -     37649 tcccc-t------------actgca-----aa-gccc-cattgtg-atagtc--ccta--c--acct----------gtcaagatagt-ccccc----t----gaagt----
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mus_caroli.LT608237.1                                   84357815 25 - 120012414 ------------------------------------------------------------t--acca----------atcaaga---------ccctct----cagt--aaa
i Mus_caroli.LT608237.1                                  I 33 I 57
s Mus_musculus.chr8                                       87646783 25 - 129401213 ------------------------------------------------------------t--acca----------atcaaga---------ccctct----cagt--aaa
i Mus_musculus.chr8                                      I 33 I 65
s Mus_pahari.LT608297.1                                   31351061 25 -  89631738 ------------------------------------------------------------t--acct----------atcaaga---------ggctct----cagt--aaa
i Mus_pahari.LT608297.1                                  I 34 I 41
s Mus_spretus.CM004101.1                                  90748858 25 - 130317789 ------------------------------------------------------------t--acca----------atcaaga---------ccctct----cagt--aaa
i Mus_spretus.CM004101.1                                 I 33 I 53
s Muscardinus_avellanarius.MusAve_scaffold_82313              3520 62 +     14296 tctcc-t------------actcta-----aa-a-cctcattgca-gtagac--ccta--t--acct----------atcaagattat-tcccc----t----gaat----a
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Nannospalax_galili.AXCS01343547.1                            766 39 +       996 tcctc-t------------actgca-----aa-a-ctccattgc------ct--ccta--t--acct----------gtgg-------------------------------
i Nannospalax_galili.AXCS01343547.1                      C 0 n 0
s Nasalis_larvatus.k141_413338                               11277 63 +     21681 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagagagt-ccccc----t----gaataa--a
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nycticebus_bengalensis.LG01                            102576086 62 - 196305487 tcccc-t------------tctaca-----ga-gtcc-cgctgtg-gttgtc--ccta--c--ctct----------gtcaag-cag--ccccc----t----gaagga--a
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             3772 62 +      8486 tcccc-t------------tctaca-----ga-gtcc-cgctgtg-gttgtc--ccta--c--ctct----------gtcaag-cag--ccccc----t----gaagga--a
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105746513 62 + 199412804 tcccc-t------------tctaca-----ga-gtcc-cgctgtg-gttgtc--ccta--c--ctct----------gtcaag-cag--ccccc----t----gaagta--a
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   20549 25 +     28053 ------------------------------------------------------------T--ACCT----------ATTAAGA---------TTCTCT----GAGT--GAA
i Ondatra_zibethicus.OndZib_scaffold_46174               I 32 I 50
s Onychomys_torridus.OnyTor_scaffold_2986                    76051 32 +    102263 TCCTC-------------TATCAC------AA-A-CCCCATTGAT-ATAGTT--CC--------------------------------------------------------
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 59
s Pan_paniscus.KQ411613.1                                    40202 63 +     80009 tccct--------------actgta-----aa-accc-CATGGCA-GTGGTC--TCTT--T--ACCT----------ATCAAGATAAT-CCCCC----T----GAATGA--A
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189139094 63 + 189151597 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctt--t--acct----------atcaagataat-ccCCC----T----GAATGA--A
i Pan_troglodytes.CM009242.2                             C 0 I 46
s Papio_anubis.CM001495.2                                183439311 63 + 183742232 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagatagt-ccCCC----T----GAATAA--A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             3004 63 +     20448 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagatagt-ccccc----t----gaataa--a
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20559809 63 +  20919399 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagatagt-ccccc----t----gaataa--a
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   1747 63 +     41871 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagatagt-ccccc----t----gaataa--a
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     5033 63 +     27711 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagatagt-ccccc----t----gaataa--a
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  5112 63 +      9205 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagatagt-ccccc----t----gaataa--a
i Papio_ursinus.k141_3428135                             C 0 C 0
s Perodicticus_ibeanus.k141_855320                            6267 62 +     13100 tcccc-t------------tctgca-----ga-gtcc-cactgtg-gtagtc--ccta--t--ctct----------gtcaag-cag--cctcc----t----gaagta--a
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             4640 62 +     25941 tcccc-t------------tctgca-----ga-gtcc-cactgtg-gttgtc--ccta--t--ctct----------gtcaag-cag--cctcc----t----gaagta--a
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18190628 25 -  18517816 ------------------------------------------------------------T--ACCT----------GTTAAGA---------T----TGTCTGAGT--AAA
i Peromyscus_maniculatus.KI615324.1                      I 1828 I 38
s Piliocolobus_badius.k141_1234363                           39787 63 +     62158 tccct--------------actgta-----aa-accc-cagggca-gtggtc--tctg--t--acct----------atcaagatagt-ccccc----t----gaataa--a
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        34509 63 +     89929 tccct--------------actgta-----aa-accc-cagggca-gtggtc--tctg--t--acct----------atcaagatagt-ccccc----t----gaataa--a
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            35925 63 +     51399 tccct--------------actgta-----aa-accc-cagggca-gtggtc--tctg--t--acct----------atcaagatagt-ccccc----t----gaataa--a
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14292161 63 -  14605196 tccct--------------actgta-----aa-accc-cagggca-gtggtc--tctg--t--acct----------atcaagatagt-ccCCC----T----GAATAA--A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189127237 63 + 189387572 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctt--t--acct----------atcaagatAGT-CCCCC----T----GAATGA--A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9566843 63 +   9816681 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctt--t--acct----------atcaagatagt-ccccc----t----gaatga--a
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               69438 64 -     81375 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagagagtcccccc----t----gaataa--a
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              1259 63 +     19060 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagagagt-ccccc----t----gaataa--a
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2593493 64 -   4620579 tcccc-t------------actgca-----ga-gccc-tgttgtg-gtagtc--cgta--c--accc----------gtcaagacagt-ccCCC----T----CTATTG--A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     987490 64 +   2598838 tcccc-t------------acttCA-----AA-GCCC-TGTTGTG-GTAGTT--CCTA--C--ACCT----------GTCAAGATAGT-CCCCC----T----GAATTA--a
i Propithecus_coquerelli.NW_012148875.1                  I 22 C 0
s Propithecus_coronatus.k141_347390                          25794 64 +     38485 tcccc-t------------acttca-----aa-gccc-tgttgtg-gtagtt--ccta--c--acct----------gtcaagatagt-ccccc----t----gaatta--a
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             1953 64 +      4256 tcccc-t------------acttca-----aa-gccc-tgttgtg-gtagtt--ccta--c--acct----------gtcaagatagt-ccccc----t----gaatta--a
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          23313 64 +     35766 tccccc-------------acttca-----aa-gccc-tgttgtg-gtagtt--ccta--c--acct----------gtcaagatagt-ccccc----t----gaatta--a
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           1496 64 -     24134 tcccc-t------------acttca-----aa-gccc-tgttttg-gtagtt--ccta--c--acct----------gtcaagatagt-ccccc----t----gaatta--a
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        25308 64 -     67325 tcccc-t------------acttca-----aa-gccc-tgttgtg-gtagtt--ccta--c--acct----------gtcaagatagt-ccccc----t----gaatta--a
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           1553 64 -      6182 tcccc-t------------acttca-----aa-gccc-tgttgtg-gtagtt--gcta--c--acct----------gtcaagatagt-ccccc----t----gaatta--a
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             6387 25 -     21651 ------------------------------------------------------------c--acct----------agcaaga---------tcctgt----aaat--aaa
i Psammomys_obesus.NESX01036370.1                        I 26 I 45
s Pygathrix_cinerea.k141_1153803                             11270 63 -     91421 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagagagt-ccccc----t----ggataa--a
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7605398 63 +   7812017 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagagagt-ccccc----t----ggataa--a
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11246 63 -     72585 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagagagt-ccccc----t----ggataa--a
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53566791 25 +  90668790 ------------------------------------------------------------t--acct----------accaaga---------tcctct----cagt--aaa
i Rattus_norvegicus.chr16                                I 33 I 41
s Rhinopithecus_bieti.k119_217274                             2954 63 -     11128 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagagagt-ccccc----t----gaataa--a
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91232309 63 - 195417433 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaaGAGAGT-CCCCC----T----GAATAA--A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7667958 63 +   7961872 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagagagt-ccccc----t----gaataa--a
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_2619299                               4217 64 -      8359 tccccc-------------actgtg-----aa-agcc-catggca-gtgatc--t--cttt--actt----------accaaggtagg-ccccc----t----gaatga--a
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            10524 64 -     13588 tccccc-------------actgtg-----aa-agcc-cacggca-gtgatc--t--cttt--actt----------accaagggagg-ccccc----t----gaatga--a
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              4160 64 -      6207 tccccc-------------actgtg-----aa-agcc-catggca-gtgatc--t--cttt--actt----------accaaggtagg-ccccc----t----gaacga--a
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                                9887 64 +     13640 tccccc-------------actgtg-----aa-agcc-catggca-gtgatc--t--cttt--actt----------accaaggtagg-ccccc----t----gaatga--a
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               4750 64 +      8564 tccccc-------------actgtg-----aa-agcc-catggca-gtgatc--t--cttt--actt----------accaaggtagg-ccccc----t----gaataa--a
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209465028 64 + 209938924 tccccc-------------actgtg-----aa-agcc-catggca-gtgatc--t--cttt--actt----------accaaggtagg-ccccc----t----gaatga--a
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 4240 64 -      9399 tccccc-------------actgtg-----aa-agcc-catggcc-gtgatc--t--cttt--actt----------accaaggtagg-ccccc----t----gaatga--a
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 1389 64 +      3421 tccccc-------------actgtg-----aa-agcc-cacggca-gtgatc--t--cttt--actt----------accaagggagg-ccccc----t----gaatga--a
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119947589 64 - 121099817 tccccc-------------actgtg-----aa-agcc-catggca-gtgatc--t--cttt--actt----------atcaaagtagg-ccCCC----T----GAATGA--A
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       20056 64 +     46362 tccccc-------------actgtg-----ga-agcc-catggca-gtgatc--t--cttt--actt----------atcaaagtagg-ccccc----t----gaatga--a
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               20151 64 +     45824 tccccc-------------actgtg-----aa-agcc-catggca-gtgatc--t--cttt--actt----------atcaaagtagg-ccccc----t----gaatga--a
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             36767 64 -     64574 tccccc-------------actgtg-----aa-agcc-catggca-gtgatc--t--cttt--actt----------atcaaagtagg-ccccc----t----gaatga--a
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_1888710                              18987 64 -     19356 tccccc-------------actgtg-----aa-agcc-catggca-gtgatc--t--cttt--actt----------atcaaagtagg-ccccc----t----gaatga--a
i Saimiri_sciureus.k141_1888710                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 20044 64 -     61129 tccccc-------------actgtg-----ga-agcc-catggca-gtgatc--t--cttt--actt----------atcaaagtagg-ccccc----t----gaatga--a
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          15782 63 -     19888 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagagagt-ccccc----t----gaataa--a
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      22984 63 +     39453 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagagagt-ccccc----t----gaataa--a
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            3510 63 +     27826 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagagagt-ccccc----t----gaataa--a
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             3031 63 -     19483 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagagagt-ccccc----t----gaataa--a
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      3093 63 +      7198 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagagagt-ccccc----t----gaataa--a
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         11353 63 +     15514 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagagagt-ccccc----t----gaataa--a
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    10059 25 -     12148 ------------------------------------------------------------T--ACCT----------ATTAAGA---------TTCTTT----GAGG--AAA
i Sigmodon_hispidus.SigHis_scaffold_60841                I 27 I 38
s Spermophilus_dauricus.KZ294078.1                         1949529 64 -   3870691 acctc-t------------actgca-----aa-a-tatcaatgca-gaagtc--ccga--a--acct----------attgagatagt-tcccc----t----gaat--aaa
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1089558 63 -   1523678 tccct--------------actgta-----aa-gccc-catggca-gtggtc--tctt--t--acct----------atcaagatagt-ccccc----t----gactga--a
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_2201908                               11813 61 +     70052 tcccc-t------------actaca-----aa-gcca-cattgca-gc---c--tcta--t--atct----------ttccaaatagt-ccttc----t----gaataa--a
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               16118 61 +     25099 tcccc-t------------actaca-----aa-gcca-cattgca-gc---c--tcta--t--atct----------ttccaaatagt-ccttc----t----gaataa--a
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186424677 63 + 186847797 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagatagt-ccCCC----T----GAATAA--A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          7084 63 -     20410 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagagagt-ccccc----t----gaataa--a
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    11280 63 +     15221 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagagagt-ccccc----t----gaataa--a
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        7185 63 +     19930 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagagagt-ccccc----t----gaataa--a
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       3615 63 -     19997 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagagagt-ccccc----t----gaataa--a
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            43734 63 -     60166 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagagagt-ccccc----t----gaataa--a
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        11205 63 -     27529 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagagagt-ccccc----t----gaataa--a
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     11147 63 -     18194 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagagagt-ccccc----t----gaataa--a
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           4882 63 -     21137 tccct--------------actgta-----aa-accc-catggta-gtggtc--tctg--t--acct----------atcaagagagt-ccccc----t----gaataa--a
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    3585 63 -     10723 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagagagt-ccccc----t----gaataa--a
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         2737 63 +      9834 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagagagt-ccccc----t----gaataa--a
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        21056 63 +     32220 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagagagt-ccccc----t----gaataa--a
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5935152 63 +   6242583 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagagagt-ccccc----t----gaataa--a
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        4399 63 +     20839 tccct--------------actgta-----aa-accc-catggca-gtggtc--tctg--t--acct----------atcaagagagt-ccccc----t----gaataa--a
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2151707 58 +   4065304 -----------------------aaaaacaaa-a-aa-cattgtg-atagtc--cctg--t--atca----------atccagatagt-ctccg----t----gaataa--a
i Tupaia_chinensis.KB320699.1                            I 13 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     5028 44 -     10553 ----------------------------------------TGgca-gtagtc--cctg--t--atca----------atcaagatagt-ctcca----t----gaataa--a
i Tupaia_tana.TupTan_flattened_line_97126                I 15 C 0
s Varecia_rubra.k141_590885                                   8173 63 +     50397 tcccc-t------------agtgca-----aa-gccc-cgttgtg-gtag-t--ccta--c--acct----------gtcaagacagt-ccccc----t----gaatta--a
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              8228 63 +     24756 tcccc-t------------agtgca-----aa-gccc-cgttgtg-gtag-t--ccta--c--acct----------gtcaagacagt-ccccc----t----gaatta--a
i Varecia_variegata.k141_1128296                         C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        20899 77 -     24430 accttcttggtccaaggatgttgca-----aa-a-cgtcattgtg-aaactc--ccta--a--acct----------atcaagatagt-tctcc----t----gaat--aaa
i Xerus_inauris.XerIna_scaffold_48378                    I 57 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      11821 50 +     63895 tcctg-t------------actgca-----aa-a-ccctactgca-gtaagt--c-ca--c--atctgtcaggacccc----------------------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 9
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519  0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188  0 +      1777 C
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zalophus_californianus.ZalCal_flattened_line_17732          2475  0 +     86975 C
e Vulpes_lagopus.VulLag_flattened_line_30954                  8219  0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5369239  0 -   5488506 C
e Ursus_maritimus.KK499267.1                               4847767  0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   52374  0 -     77625 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   2797  0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    384502  0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      116051  0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 70231  0 +    116680 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                 7643  0 +     41958 C
e Sus_scrofa.JH118708.1                                      32590  0 -     47482 C
e Suricata_suricatta.SurSur_flattened_line_6629              15608  0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             28038  0 +     97271 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_5840            188497  0 -    191337 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152174  0 -    313613 C
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                85541  0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20271604  0 -  38429054 C
e Pteropus_vampyrus.KN525825.1                             1357630  0 +   4952924 C
e Pteropus_alecto.KB030862.1                              22974540  0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         37522  0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            12065  0 -     21811 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9940  0 -     78924 C
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Panthera_tigris.KE722367.1                               4718322  0 -   8748460 C
e Panthera_pardus.KV860321.1                                261685  0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  148478  0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       459559  0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              503905  0 -   2017862 C
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1359220  0 +   3988456 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9146805  0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    757209  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186877  0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               298505  0 -  14710649 C
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   32702  0 +     37127 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 138676  0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         2599  0 -      8324 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11256644 174 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12178700 925 -  29670104 I
e Mellivora_capensis.MelCap_flattened_line_69365              7322  0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                         7651  0 -    207569 C
e Manis_pentadactyla.KN006162.1                              48157  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              16772  0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 88359  0 +     94391 C
e Lycaon_pictus.CM007581.1                                17952544  0 -  59628241 C
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3039763  0 +   3914936 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  41757  0 +     55795 C
e Hipposideros_galeritus.HipGal_scaffold_29171               40558  6 +     43066 I
e Hipposideros_armiger.JXIK01000431.1                       109122  6 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               239595  0 +    327341 C
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Galagoides_demidoff.k141_31856                              3354  0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  6829  0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20193317  0 + 205367284 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Equus_przewalskii.KK951119.1                               30446  0 +    498745 C
e Equus_caballus.CM000403.2                               18528431  0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1280610  0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16326615  0 -  41312741 C
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Eidolon_helvum.KE759718.1                                   8270  0 +     11740 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    3324  0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  670569  0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            61937  0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             25769  0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_239572              2140  5 -      5012 I
e Cricetulus_griseus.LT883664.1                           11664308 436 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 47011 110 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          11367  0 -     20389 C
e Condylura_cristata.JH655891.1                           17547123  0 -  53390261 C
e Choloepus_hoffmanni.KN194906.1                            171056  0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15957  0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            5629  0 -      6351 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_247804          3434  0 -      3715 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     90107  0 +    217609 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18497604  0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17956304  0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9032039  0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    182653  0 -    185531 C
e CanFam4.chr16                                           17796596  0 -  60362399 C
e Camelus_ferus.KB017975.1                                  400489  0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2332213  0 -   7040546 C
e Camelus_bactrianus.KN276810.1                            9999749  0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Ailurus_fulgens.LNAC01001112.1                             76634  0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9507851  0 -  29979442 C
e Acinonyx_jubatus.LLWD01001279.1                           824607  0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       2913 46 +     62944 TTC----------G------GCCT---TATTGTTTTAACAAATGTCATGAATGAT--T-T----TT-T-----------T------C--G---AT
s Acomys_cahirinus.AcoCah_scaffold_12655                     67193 20 +     87051 GGT----------T------GGTTGGTGATTGGTTG-----------------------------------------------------------
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 48 I 252
s Allactaga_bullata.AllBul_scaffold_9566                     66524 17 -     89534 gtc----------t------gcct---ATCTCCTTT-----------------------------------------------------------
i Allactaga_bullata.AllBul_scaffold_9566                 I 9 I 2
s Allenopithecus_nigroviridis.k141_3361533                   10842 51 -     52922 ctc----------a------gcct---tattgttttaacaaatgttacgaatgat--t-ttt--tt-t-----------tt---TTC--A---AT
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         10772 51 -     28001 ctc----------a------gcct---tattgttttaacaaatgtcacaaatgat--t-ttt--tt-t-----------tt---TTC--G---AT
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          1218 51 -     18505 ctc----------a------gcct---tattgttttaacaaatgtcacaaatgat--t-ttt--tt-t-----------tt---TTC--G---AT
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           2067 51 -     12518 ctc----------a------gcct---tattgttttaacaaatgtcacaaatgat--t-ttt--tt-t-----------tt---TTC--G---AT
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_2038611                             23249 50 +     24414 ctc----------t------gttt---tatcattttctcaaatgtcatgaatgatt-t-t----tt-t-----------tt---CTT--G---TC
i Alouatta_belzebul.k141_2038611                         C 0 C 0
s Alouatta_caraya.k141_885645                                54010 50 +     54689 ctc----------t------gttt---tatcattttctcaaatgtcatgaatgatt-t-t----tt-t-----------tt---CTT--G---TC
i Alouatta_caraya.k141_885645                            C 0 C 0
s Alouatta_discolor.k141_2852575                            124599 50 +    125349 ctc----------t------gttt---tatcattttctcaaatgtcatgaatgatt-t-t----tt-t-----------tt---CTT--G---TC
i Alouatta_discolor.k141_2852575                         C 0 C 0
s Alouatta_juara.k141_1509701                                20944 50 +     25266 ctc----------t------gttt---tatcattttctcaaatgtcttgaatgatt-t-t----tt-t-----------tt---CTT--G---TC
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                            385 51 +      2906 ctc----------t------gttt---tatcattttctcaaatgtcttgaatgatt-t-t----tt-tt----------tt---CTT--G---TC
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            14499 50 -     18578 ctc----------t------gttt---tatcattttctcaaatgtcttgaatgatt-t-t----tt-t-----------tt---CTT--G---TC
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_668256                              17203 50 +     18088 ctc----------t------gttt---tatcattttctcaaacgtcatgaatgatt-t-t----tt-t-----------tt---CTT--G---TC
i Alouatta_palliata.k141_668256                          C 0 C 0
s Alouatta_puruensis.k141_1766044                            18254 50 -     18677 ctc----------t------gttt---tatcattttctcaaatgtcttgaatgatt-t-t----tt-t-----------tt---CTT--G---TC
i Alouatta_puruensis.k141_1766044                        C 0 C 0
s Alouatta_seniculus.k141_117119                             11236 50 +     50774 ctc----------t------gttt---tatcattttctcaaatgtcttgaatgatt-t-t----tt-t-----------tt---CTT--G---TC
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  11865 50 -     33861 ctc----------t------gttt---tatcattttaacaaatgtcatgaatgat--ttt----tt-t-----------tt---CCT--G---TC
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            11886 50 -     34016 ctc----------t------gttt---tatcattttaacaaatgtcatgaatgat--ttt----tt-t-----------tt---CCT--G---TC
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4294281 50 -   5030052 ctc----------t------gttt---tatcattttaacaaatgtcatgaatgat--ttt----tt-t-----------tt---cct--g---tc
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             11886 51 -     34685 ctc----------t------gttt---tatcattttaacaaatgtcatgaatgat--tttt---tt-t-----------tt---CCT--G---TC
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               25008 50 -     47192 ctc----------t------gttt---tatcattttaacaaatgtcatgaatgat--ttt----tt-t-----------tt---CCT--G---TC
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       8474 38 +     20879 gtc----------t------gc-------ctGTTTTG-------TCATGAAAAAA--T-G-----T-T-----------T--TTCAC--A---AA
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        16096 48 +     17124 gtc----------t------gctt---ttctgttctaataagtgtcacgaataat--t-t-----t-t-----------tctt---c--a---at
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Avahi_laniger.k141_765380                                  50492 52 -     92717 gt-----------t------gctt---ttctgttttaataagcatcatgattgatttt-t-----t-t-----------tct---TC--ATCAAT
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              51121 52 +     85213 gt-----------t------gctt---ttctgttttaataagcatcatgattgatttt-t-----t-t-----------tct---TC--ATCAAT
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             1617 50 -     10423 ctc----------t------gttt---tatcatttcaacaaacgtcatgaatgat--tct----tt-t-----------tt---CTT--G---TC
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             21109 50 +     31915 ctc----------t------gttt---tatcattttaacagatgtcatgaatgat--tct----tt-t-----------tt---CTT--G---TC
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            1584 50 +      5267 ctc----------t------gttt---tatcattttaacaaacgtcatgaatgat--tct----tt-t-----------tt---CTT--G---TC
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23586796 50 - 189096842 CTC----------T------GTTT---TATCATTTTAACAAACGTCATGAGTGAT--TCT----TT-T-----------T---TCTT--G---TC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              8328 50 -     12001 ctc----------t------gttt---tatcattttaacaaacgtcatgaatgat--tct----tt-t-----------tt---CTT--G---TC
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Carlito_syrichta.NW_007259797.1                           142236 37 -    496798 ------------------------------GATTTTTACAAGCatcatgaagatt--t-t-----t-t-----------tctt---c--a---ac
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    134974 11 +    179628 -----------------------------------------------------------------T-T-----------G--TTTAC--A---AT
i Castor_canadensis.CasCan_scaffold_2074                 I 5 C 0
s Cebuella_niveiventris.k141_1251222                          6237 50 -     11392 ctc----------t------gttt---tatcattttaacaaacgtcatgaatgat--tct----tt-t-----------tt---CTA--G---TC
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               2335 50 -      7577 ctc----------t------gttt---tatcattttaacaaacgtcatgaatgat--ttt----tt-t-----------tt---CTA--G---TC
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         6147 37 -      8605 ------------------------------gatttttacaagcatcatgaagatt--t-t-----t-t-----------tctt---c--a---ac
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4471798 50 +   4669795 CTC----------A------GCCT---TATTGTTTTAACAAATGtcatgaatgat--t-t----tttt-----------tttt---c--g---at
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        10347 49 -     19203 ctc----------a------gcct---tattgttttaacaaatgtcatgaatgat--t-t----tg-t-----------tttt---C--G---AT
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           4768 50 +      8260 ctc----------a------gcct---tattgttttaacaaatgtcatgaatgat--t-t----tttt-----------ttt---TC--G---AT
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           4996 49 +     27781 ctc----------a------gcct---tattgttttaacaaatgtcatgaatgat--t-t----tg-t-----------tttt---C--G---AT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         5146 54 -     20310 ctc----------a------gcct---tattgttttaacaaatgtcacgaaggatt-t-ttttttt-T-----------T---TTTC--G---AT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           8130 54 +     29689 ctc----------a------gcct---tattgttttaacaaatgtcacgaaggatt-t-ttttttt-T-----------T---TTTC--G---AT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            2566 43 +      9989 ctc----------a------gcct---tactgttttaacaaatgtcatgaaggatt-t-tt---tt-t---------------------------
i Cercopithecus_diana.k141_2427854                       C 0 I 3
s Cercopithecus_hamlyni.k141_187466                          10813 45 -     27936 ctc----------a------gcct---tattgttttaacaaatgtcacgaaggatt-t-ttt--tt-t-----------t---------------
i Cercopithecus_hamlyni.k141_187466                      C 0 I 3
s Cercopithecus_lowei.k141_457449                            10840 51 -     11289 ctc----------a------gcct---tattgttttaacaaatgtcacgaaggatt-t-ttt--t--t-----------tt---TTC--G---AT
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38813212 54 +  39242232 ctc----------a------gcct---tattgttttaacaaatgtcacgaaggatt-t-ttttttt-T-----------T---TTTC--G---AT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21218911 51 -  21565898 ctc----------a------gcct---tattgttttaacaaatgtcacgaaggatt-t-ttt--t--t-----------tt---TTC--G---AT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       36030 51 -     53127 ctc----------a------gcct---tattgttttaacaaatgtcacgaaggatt-t-ttt--t--t-----------tt---TTC--G---AT
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        3315 52 +      7159 ctc----------a------gcct---tattgttttaacaaatgtcacgaaggatt-t-ttt--tt-t-----------t---TTTC--G---AT
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       10833 36 -     27947 ctc----------a------gcct---tattgttttaacaaatgtcacgaaggat----------------------------------------
i Cercopithecus_petaurista.k141_807961                   C 0 I 15
s Cercopithecus_pogonias.k141_822820                         10809 51 +     17596 ctc----------a------gcct---tattgttttaacaaatgtcacgaaggatt-t-ttt--t--t-----------tt---TTC--G---AT
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         41310 51 -     41420 ctc----------a------gcct---tactgttttaacaaatgtcacgaaggatt-t-tt---tt-t-----------tt---TTC--G---AT
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Cheirogaleus_major.k141_333249                             17915 51 -     52598 gt----------ct------gctt---gtttgttttaagaaacatcatgaataat--t-t-----t-t-----------tcgt---c--tttaaT
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           13264 51 +     57038 gt----------ct------gctt---gtttgttttaagaagcatcatgaataat--t-t-----t-t-----------t---cATC--TTCAGT
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           7256 50 +     11226 CTC----------T------GTTT---TATCATTTTAACAAATGTCAGGAATGAT--T-C----TT-C-----------T--TTCTT--G---TC
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18424771 51 -  18827391 ctc----------a------gcct---tattgttttaacaaatgtcacgaatgat--t-ttt--tt-t-----------tt---TTC--G---AT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       11213 36 -     50209 ctc----------a------gcct---tattgttttaacaaatgtcacgaatgat----------------------------------------
i Chlorocebus_pygerythrus.k141_1025673                   C 0 I 14
s Chlorocebus_sabaeus.CM001947.1                         135418217 52 + 135778131 CTC----------A------GCCT---TATTGTTTTAACAAATGTCacgaatgat--t-ttt--tttt-----------tttt---c--g---at
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1906738 48 +   2368649 CTT----------A------GCCT---TATTGTTTTGACAAATGtcatgaatgat--t-t----t--t-----------tttt---c--g---aT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199946407 48 + 200372422 ctt----------a------gcct---tattgttttgacaaatgtcatgaatgat--t-t----t--t-----------tttt---C--C---AT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              33279 48 +     84244 ctt----------a------gcct---tattgttttgacaaatgtcatgaatgat--t-t----t--t-----------tttt---C--G---AT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 47121 17 +     63868 gtc----------t------gtgt---gtatgtgtg-----------------------------------------------------------
i Cricetomys_gambianus.CriGam_scaffold_18520             I 110 I 24
s Daubentonia_madagascariensis.ctg71                      12534092 51 -  12879189 gtc----------t------tctt---ttctgttttaataagtgtcatggataat--t-t-----t-t-----------tctt---c--atcaAT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          16440 23 -    110024 gtt----------tttgaaggtat---tgatgtttg-----------------------------------------------------------
i Ellobius_lutescens.LOEQ01008920.1                      I 50 I 244
s Ellobius_talpinus.LOJH01109367.1                            2500 12 -      6299 gtt----------ttcgaaGGT-------------------------------------------------------------------------
i Ellobius_talpinus.LOJH01109367.1                       I 50 I 246
s Erythrocebus_patas.Contig38                             21201414 50 -  21539334 ctc----------a------gcct---tattgttttaacaaatgtcacgaatgat--t-ttt---t-t-----------ttt---TC--G---AT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              10596 51 -     14127 gtc----------t------gctt---ttctgttttaagaagcatcatgcttaat--t-t-----t-t-----------tctt---c--aTTGAT
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                3294 51 -     16928 gtc----------t------gctt---ttctgttttaagaagcatcatgcttaat--t-t-----t-t-----------tctt---c--aTTGAT
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              12327 51 -     25546 gtc----------t------gctt---ttctgttttaagaagcatcatgattaat--t-t-----t-t-----------tctt---c--aTCGAT
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             9512 51 +     26330 gtc----------t------gctt---ttctgttttaagaagcatcatgattaat--t-t-----t-t-----------tctt---c--aTCGAT
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 10768 51 +     23973 gtc----------t------gctt---ttctgttttaagaagcatcatgcttaat--t-t-----t-t-----------tctt---c--aTTGAT
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 9512 51 +     75513 gtc----------t------gctt---ttctgttttaagaagcatcatgattaat--t-t-----t-t-----------tctt---c--aTCGAT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  7463 51 +     97555 gtc----------t------gctt---ttctgttttaagaagcatcatgcttaat--t-t-----t-t-----------tctt---c--aTTGAT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            10390 51 +     26496 gtc----------t------gctt---ttctgttttaagaagcatcatgattaat--t-t-----t-t-----------tctt---c--atcaAT
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                   996 51 -     17153 gtc----------t------gctt---ttctgttttaagaagcatcatgcttaat--t-t-----t-t-----------tctt---c--aTTGAT
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              10571 51 +    111500 gtc----------t------gctt---ttctgttttaagaagcatcatgcttaat--t-t-----t-t-----------tctt---c--aTTGAT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_266699                813 50 +      2098 gtc----------t------gcct---caccgtgttaacaaatgtcatgaataat--t-t-----t-t-----------tcttt-ga--A---AT
i Galeopterus_variegatus.GalVar_scaffold_266699          C 0 C 0
s Gorilla_beringei.k141_3596273                              12148 36 -     32273 ttt----------g------gcct---tattgttttaacaaatgtcatgaatgat----------------------------------------
i Gorilla_beringei.k141_3596273                          C 0 I 10
s Gorilla_gorilla.LT578341.1                             186334296 36 + 186649187 ttt----------g------gcct---tattgttttaacaaatgtcatgaatgat----------------------------------------
i Gorilla_gorilla.LT578341.1                             C 0 I 10
s Graphiurus_murinus.GraMur_scaffold_10447                   31256 29 +     78134 gtc----------t------acct---tactgtttca-------tcatgaacaat----------------------------------------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 11
s Hapalemur_alaotrensis.k141_170648                           3659 51 -     19426 gtc----------t------gctt---ttctgttttaagaagcatcatgattaat--t-t-----t-t-----------tctt---c--aTCGAT
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              8803 51 -     15286 gtc----------t------gctt---ttctgttttaagaagcatcatgattaat--t-t-----t-t-----------tctt---c--aTCGAT
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             10441 51 +     18253 gtc----------t------gctt---ttctgttttaagaagcatcatgattaat--t-t-----t-t-----------tctt---c--aTCGAT
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         10544 51 -     41752 gtc----------t------gctt---ttctgttttaagaagcatcatgattaat--t-t-----t-t-----------tctt---c--aTCGAT
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         10377 51 -     16460 gtc----------t------gctt---ttctgttttaagaagcatcatgattaat--t-t-----t-t-----------tctt---c--aTCGAT
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Hoolock_leuconedys.ctg274                                    430990 42 +    630532 ctc----------g------gcct---tattgttttaacaaatatcatgaatgat--t-t----tt-t-----------t---------------
i Hoolock_leuconedys.ctg274                                 C 0 I 5
s Hylobates_agilis.k141_307679                               13921 44 -     15490 ctc----------g------gcct---tattgttttaacaaatatcacgaatgatttt-t----tt-t-----------t---------------
i Hylobates_agilis.k141_307679                           C 0 I 6
s Hylobates_klossii.k141_282416                              55927 44 +     67168 ctc----------g------gcct---tattgttttaacaaatatcacgaatgatttt-t----tt-t-----------t---------------
i Hylobates_klossii.k141_282416                          C 0 I 5
s Hylobates_pileatus_b.LG02                                     189539577 44 - 191637585 ctc----------g------gcct---tattgttttaacaaatatcacgaatgatttt-t----tt-t-----------t---------------
i Hylobates_pileatus_b.LG02                                     C 0 I 5
s Hylobates_pileatus_a.tarseq_633                            3332470 44 -  11177569 ctc----------g------gcct---tattgttttaacaaatatcacgaatgatttt-t----tt-t-----------t---------------
i Hylobates_pileatus_a.tarseq_633                          C 0 I 5
s Ictidomys_tridecemlineatus.JH393364.1                    7516507 52 -   7955117 gtc----------t------gaat---tactgttttg-------ttatgaataat--t-g-----t-ttttggtttt--tttt-aac--a---at
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   19357 49 +     31101 gt-----------c------actt---ttctgttttaataa-cgtcatgaataat--t-t-----t-t-----------tctt---c--atcaAT
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8272866 17 -   9596543 gtc----------t------gcct---atctgcttt-----------------------------------------------------------
i Jaculus_jaculus.JH725527.1                             I 7 I 2
s Lemur_catta.scaffold_24                                 15520905 51 -  30322482 gtc----------t------gctt---ttctgttttaagaagcgtcatgattaat--t-t-----t-t-----------tctt---c--aTCGAT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        4023 50 +     64341 ctc----------t------gttt---tataattttaacagatgtcatgaatgat--tct----tc-t-----------tt---CTT--G---TC
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           1083 50 +      4941 ctc----------t------gttt---tataattttaacagatgtcatgaatgat--tct----tc-t-----------tt---CTT--G---TC
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        3951 50 +     35603 ctc----------t------gttt---tataattttaacagatgtcatgaatgat--tct----tc-t-----------tt---CTT--G---TC
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    25381 50 +     38576 ctc----------t------gttt---tatcattttaacaaatgtcatgaatgat--tct----tt-t-----------tt---CTT--G---TC
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         22078 50 +     66356 ctc----------t------gttt---tatcattttaacaaatgtcatgaatgat--tct----tt-t-----------tt---CTT--G---TC
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          7814 51 -     23766 gt----------ct------gctt---ttctgttttaataagtgttatgaataat--t-t-----t-t-----------tctt---c--atcaAT
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             25761 51 +     45836 gt----------ct------gctt---ttctgttttaataagtgttatgaataat--t-t-----t-t-----------tctt---c--atcaAT
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_320948                            23 51 -      1719 gt----------ct------gctt---ttctgttttaataagtgttatgaataat--t-t-----t-t-----------tctt---c--atcaAT
i Lepilemur_ruficaudatus.k141_320948                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      23816 51 +     54090 gt----------ct------gctt---ttctgttttaataagtgttatgaataat--t-t-----t-t-----------tctt---c--atcaAT
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Lophocebus_aterrimus.ctg367                              1433345 49 +   1826925 ctc----------a------gcct---tattgttttaacaaatgtcatgaatgaa--t-t----tt-t-----------tttt---C--G---AT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            2328 48 +     11245 gtc----------t------gctt---ttttgttttaataagtgtcatgaataat--t-t-----t-g-----------tctt---c--a---ac
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1001165 48 +   6120653 gtc----------t------gctt---ttttgttttaataagtgtcatgaataat--t-t-----t-g-----------tctt---c--a---ac
i Loris_tardigradus.ctg83                                C 0 C 0
s Macaca_arctoides.k141_2326796                               3166 49 +     40492 ctc----------a------gcct---tattgttttaacaaatgtcatgaatgat--t-t----tt-t-----------ttt---CC--G---AT
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59672421 48 +  60120075 ctc----------a------gcct---tattgttttaacaaatgtcatgaatgat--t-t-----t-t-----------ttt---CC--G---AT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  8921 50 -     26193 ctc----------a------gcct---tattgttttaacaaatgtcatgaatgat--ttt----tt-t-----------ttt---CC--G---AT
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            76718 49 -    114318 ctc----------a------gcct---tattgttttaacaaatgtcacgaatgat--t-t----tt-t-----------ttt---CC--G---AT
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  2433 49 -     23192 ctc----------a------gcct---tattgttttaacaaatgtcatgaatgat--t-t----tt-t-----------ttt---CC--G---AT
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                11886 48 -     29190 ctc----------a------gcct---tattgttttaacaaatgtcatgaatgat--t-t----tt-t-----------tt----CC--G---AT
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  20453 49 +     37952 ctc----------a------gcct---tattgttttaacaaatgtcatgaatgat--t-t----tt-t-----------ttt---CC--G---AT
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186835541 49 + 187317192 CTC----------A------GCCT---TATTGTTTTAACAAATGtcatgaatgat--t-t----tt-t-----------ttt---cc--g---aT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25454104 49 -  25927173 CTC----------A------GCCT---TATTGTTTTAACAAATGtcatgaatgat--t-t----tt-t-----------ttt---cc--g---aT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  76302 49 +     89720 ctc----------a------gcct---tattgttttaacaaatgtcatgaatgat--t-t----tt-t-----------ttt---CC--G---AT
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 3300 48 +     20474 ctc----------a------gcct---tattgttttaacaaatgtcatgaatgat--t-t-----t-t-----------ttt---CC--G---AT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   3101 49 -     14993 ctc----------a------gcct---tattgttttaaaaaatgtcatgaatgat--t-t----tt-t-----------ttt---CC--G---AT
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  325973 48 -    668171 ctc----------a------gcct---tattgttttaacaaatgtcatgaatgat--t-t----tt-t-----------tt----CC--G---AT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 1404 48 -     24072 ctc----------a------gcct---tattgttttaacaaatgtcatgaatgat--t-t-----t-t-----------ttt---CC--G---AT
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               22040 49 -     45290 ctc----------a------gcct---tattgttttaacaaatgtcatgaatgat--t-t----tt-t-----------ttt---CC--G---AT
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23933588 49 -  24302211 ctc----------a------gcct---tattgttttaacaaatgtcatgaatgat--t-t----tt-t-----------tttt---C--G---AT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               347764 49 +    752769 ctc----------a------gcct---tattgttttaacaaatgtcatgaatgat--t-t----tt-t-----------tttt---C--G---AT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33098817 54 -  40650429 gtc----------t------gaat---tactgttttg-------ttatgaataat--t-g-----t-ttttgtttttgttttt-aac--a---at
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 28822 11 +    140813 -----------------------------------------------------------------G-t-----------ttt--gga--g---at
i Meriones_unguiculatus.MerUng_scaffold_7390             I 46 I 247
s Mico_argentatus.k141_1239457                                2163 50 -      7380 ctc----------t------gttt---tatcattctaacaaacgtcatgaatgat--tct----tt-t-----------tt---CTT--G---TC
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               1233 50 +     18990 ctc----------t------gttt---tatcatttcaacaaacgtcatgaatgat--tct----tt-t-----------tt---CTT--G---TC
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      2168 50 -      7356 ctc----------t------gttt---tatcattctaacaaacgtcatgaatgat--tct----tt-t-----------tt---CTT--G---TC
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18288288 51 -  93316391 gt----------ct------gttt---ttctgttttaagaagcatcatgaataat--t-t-----t-t-----------tctt---c--atcaat
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_534055                           5339 51 -     28506 ctc----------a------gcct---tactgttttaacaaatgtcacgaatgatt-t-ttt--t--t-----------tt---TTC--G---AT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirza_zaza.k141_952172                                      5859 50 -     37649 -c-----------t------gttt---ttctgttttaagaagcatcatgaataat--t-t-----t-t-----------ttttt--C--ATCAAT
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mus_caroli.LT608237.1                                   84357897  4 - 120012414 --------------------------------------------------------------------------------------a--a---gt
i Mus_caroli.LT608237.1                                  I 57 I 272
s Mus_musculus.chr8                                       87646873  4 - 129401213 --------------------------------------------------------------------------------------a--g---gt
i Mus_musculus.chr8                                      I 65 I 278
s Mus_pahari.LT608297.1                                   31351127  4 -  89631738 --------------------------------------------------------------------------------------a--g---gt
i Mus_pahari.LT608297.1                                  I 41 I 279
s Mus_spretus.CM004101.1                                  90748936  4 - 130317789 --------------------------------------------------------------------------------------a--g---gt
i Mus_spretus.CM004101.1                                 I 53 I 282
s Muscardinus_avellanarius.MusAve_scaffold_82313              3582 29 +     14296 gtc----------t------gcca---tactgtttta-------tcacgaacaat----------------------------------------
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 10
s Nasalis_larvatus.k141_413338                               11340 38 +     21681 ctc----------a------gcct---tattgatttaacaaatgtcatgaatgat--t-t-----------------------------------
i Nasalis_larvatus.k141_413338                           C 0 I 9
s Nycticebus_bengalensis.LG01                            102576148 48 - 196305487 gtc----------t------gctt---ttctgttttaataagtgtcatgaataat--t-t-----t-t-----------tctt---c--a---ac
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             3834 48 +      8486 gtc----------t------gctt---ttctgttttaataagtgtcatgaataat--t-t-----t-t-----------tctt---c--a---ac
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105746575 48 + 199412804 gtc----------t------gctt---ttctgttttaataagtgtcatgaataat--t-t-----t-t-----------tctt---c--a---ac
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   20624 23 +     28053 GTT----------TTCAAAGGTAT---TGATGTTTG-----------------------------------------------------------
i Ondatra_zibethicus.OndZib_scaffold_46174               I 50 I 257
s Onychomys_torridus.OnyTor_scaffold_2986                    76142 33 +    102263 GTTTGTTGTTTATTTTGGAAGTAT---TGATGTTTG-----------------------------------------------------------
i Onychomys_torridus.OnyTor_scaffold_2986                I 59 I 235
s Pan_paniscus.KQ411613.1                                    40265 46 +     80009 TTC----------G------GCCT---TATTGTTTTAACAAATGTCATGAATGAT--T-T----TT-T-----------T------C--G---AT
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03002948.1                             16207 47 +     28717 TTC----------G------GCCT---TATTGTTTTAACAAATGtcatgaatgat--t-t----tt-t-----------tt-----c--g---aT
i Pan_troglodytes.NBAG03002948.1                         n 46 I 2712
s Papio_anubis.CM001495.2                                183439374 49 + 183742232 CTC----------A------GCCT---TATTGTTTTAACAAATGtcatgaatgaa--t-t----tt-t-----------tttt---c--g---aT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             3067 49 +     20448 ctc----------a------gcct---tattgttttaacaaatgtcatgaatgaa--t-t----tt-t-----------tttt---C--G---AT
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20559872 49 +  20919399 ctc----------a------gcct---tattgttttaacaaatgtcatgaatgaa--t-t----tt-t-----------tttt---C--G---AT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   1810 49 +     41871 ctc----------a------gcct---tattgttttaacaaatgtcatgaatgaa--t-t----tt-t-----------tttt---C--G---AT
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     5096 49 +     27711 ctc----------a------gcct---tattgttttaacaaatgtcatgaatgaa--t-t----tt-t-----------tttt---C--G---AT
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  5175 50 +      9205 ctc----------a------gcct---tattgttttaacaaatgtcatgaatgaa--t-t----tt-tt----------tttt---C--G---AT
i Papio_ursinus.k141_3428135                             C 0 C 0
s Perodicticus_ibeanus.k141_855320                            6329 48 +     13100 gtc----------t------gctt---ttctgttctaataagtgtcatgaataat--t-t-----t-t-----------tctt---c--a---at
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             4702 48 +     25941 gtc----------t------gctt---ttctgttctaataagcatcatgaataat--t-t-----t-t-----------tctt---c--a---at
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18190691 23 -  18517816 gtt----------ttggggggtat---ggatgtttg-----------------------------------------------------------
i Peromyscus_maniculatus.KI615324.1                      I 38 I 255
s Piliocolobus_badius.k141_1234363                           39850 49 +     62158 ctt----------a------gcct---tattgttttgacaaatgtcatgaatgat--t-tt---t--t-----------tttt---C--G---AT
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        34572 49 +     89929 ctt----------a------gcct---tattgttttgacaaatgtcatgaatgat--t-tt---t--t-----------tttt---C--G---AT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            35988 49 +     51399 ctt----------a------gcct---tattgttttgacaaatgtcatgaatgat--t-tt---t--t-----------tttt---C--G---AT
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14292224 51 -  14605196 CTT----------A------GCCT---TATTGTTTTGACAAATGtcatgaatgat--t-tt---t--t-----------ttttt-cc--g---at
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189127300 52 + 189387572 CTC----------G------GTCT---TATTGTTTTAACAAATgtcatgaattat--t-t----tt-t-----------tttttttt--g---at
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9566906 54 +   9816681 ctc----------g------gcct---tattgttttaacaaatgtcatgagtgat--t-t----tt-t-----------ttttTTTTTTG---AT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               69502 38 -     81375 ctc----------a------gcct---tactgatttaacaaatgtcatgaatgat--t-t-----------------------------------
i Presbytis_comata.k141_677006                           C 0 I 9
s Presbytis_mitrata.k141_1087752                              1322 38 +     19060 ctc----------a------gcct---tactgatttaacaaatgtcatgaatgat--t-t-----------------------------------
i Presbytis_mitrata.k141_1087752                         C 0 I 9
s Prolemur_simus.MPIZ01000396.1                            2593557 51 -   4620579 gtc----------t------gctt---ttctgttttaagaagcatcatgattaat--t-t-----t-t-----------tctt---c--atcgAT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     987554 50 +   2598838 gt-----------t------gctt---ttctgttttaataagcatcatgattaat--t-t-----t-t-----------tctt---c--atcaat
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          25858 50 +     38485 gt-----------t------gctt---ttctgttttaataagcatcatgattaat--t-t-----t-t-----------tctt---c--atcaAT
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             2017 50 +      4256 gt-----------t------gctt---ttctgttttaataagcatcatgattaat--t-t-----t-t-----------tctt---c--atcaAT
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          23377 50 +     35766 gt-----------t------gctt---ttctgttttaaagagcatcatgattaat--t-t-----t-t-----------tctt---c--atcaAT
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           1560 50 -     24134 gt-----------t------gctt---ttctgttttaataagcatcacgattaat--t-t-----t-t-----------tctt---c--atcaAT
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        25372 50 -     67325 gt-----------t------gctt---ttctgttttaataagcgtcatgattaat--t-t-----t-t-----------tctt---c--atcaAT
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           1617 50 -      6182 gt-----------t------gctt---ttctgttttaataagcatcatgattaat--t-t-----t-t-----------tctt---c--atcaAT
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Rattus_norvegicus.chr16                                 53566857  4 +  90668790 --------------------------------------------------------------------------------------a--a---gT
i Rattus_norvegicus.chr16                                I 41 I 233
s Psammomys_obesus.NESX01036370.1                             6457 17 -     21651 gtt----------t------gttt---gtttgtttg-----------------------------------------------------------
i Psammomys_obesus.NESX01036370.1                        I 45 I 257
s Pygathrix_cinerea.k141_1153803                             11333 38 -     91421 ctc----------a------gcct---tattgatttaacaaatgtcatgaatgat--t-t-----------------------------------
i Pygathrix_cinerea.k141_1153803                         C 0 I 9
s Pygathrix_nigripes_b.ctg100                                 7605461 38 +   7812017 ctc----------a------gcct---tattgatttaacaaatgtcatgaatgat--t-t-----------------------------------
i Pygathrix_nigripes_b.ctg100                               C 0 I 9
s Pygathrix_nigripes_a.k141_215492                             11309 38 -     72585 ctc----------a------gcct---tattgatttaacaaatgtcatgaatgat--t-t-----------------------------------
i Pygathrix_nigripes_a.k141_215492                         C 0 I 9
s Rhinopithecus_bieti.k119_217274                             3017 38 -     11128 ctc----------a------gcct---tattgatttaacaaatgtcatgaatgat--t-t-----------------------------------
i Rhinopithecus_bieti.k119_217274                        C 0 I 9
s Rhinopithecus_roxellana.NC_044550.1                     91232372 38 - 195417433 CTC----------A------GCCT---TATTGATTTAACAAATGtcatgaatgat--t-t-----------------------------------
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 9
s Rhinopithecus_strykeri.ctg102                            7668021 38 +   7961872 ctc----------a------gcct---tattgatttaacaaatgtcatgaatgat--t-t-----------------------------------
i Rhinopithecus_strykeri.ctg102                          C 0 I 9
s Saguinus_bicolor.k141_2619299                               4281 50 -      8359 ctc----------t------gttt---tatcattttaacaaatgtcaggaatgat--tct----tc-t-----------tt---CTT--G---TC
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            10588 50 -     13588 ctc----------t------gttt---tatcattttaacaaatgtcatgaatgat--tct----tt-t-----------tt---CTT--G---TC
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              4224 50 -      6207 ctc----------t------gttt---tatcattttaacaaatgtcatgaatgat--tgt----tc-t-----------tt---CTT--G---TC
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                                9951 50 +     13640 ctc----------t------gttt---tatcattttaacaaatgtcatgaatgat--tct----tc-t-----------tt---CTT--G---TC
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               4814 50 +      8564 ctc----------t------gttt---tatcattttaacaaatgtcatgaatgat--tcc----tt-t-----------ttct---t--G---TC
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209465092 50 + 209938924 ctc----------t------gttt---tatcattttaacaaatgtcaggaatgat--tct----tc-t-----------tt---CTT--G---TC
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 4304 50 -      9399 ctc----------t------gttt---tatcattttaacaaatgtcatgaatgat--tct----tc-t-----------tt---CTT--G---TC
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 1453 50 +      3421 ctc----------t------gttt---tatcattttaacaaatgtcatgaatgat--tcc----tt-t-----------ttct---t--G---TC
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119947653 49 - 121099817 ctc----------t------gttt---tatcattttaacaaatgtcacgaatgat--t-t----tt-t-----------ttct---t--g---tc
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       20120 49 +     46362 ctc----------t------gttt---tatcattttaacaaatgtcacgaatgat--t-t----tt-t-----------ttct---T--G---TC
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               20215 49 +     45824 ctc----------t------gttt---tatcattttaacaaatgtcacgaatgat--t-t----tt-t-----------ttct---T--G---TC
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             36831 48 -     64574 ctc----------t------gttt---tatcattttaacaaatgtcac-aatgat--t-t----tt-t-----------ttct---T--G---TC
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_1888710                              19051 49 -     19356 ctc----------t------gttt---tatcattttaacaaatgtcacgaatgat--t-t----tt-t-----------ttct---T--G---TC
i Saimiri_sciureus.k141_1888710                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 20108 49 -     61129 ctc----------t------gttt---tatcattttaacaaatgtcacgaatgat--t-t----tt-t-----------ttct---T--G---TC
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          15845 38 -     19888 ctc----------a------gcct---tattgatttaacaaatgtcatgaatgat--t-t-----------------------------------
i Semnopithecus_entellus.k141_11662                      C 0 I 9
s Semnopithecus_hypoleucos.k141_1615806                      23047 38 +     39453 ctc----------a------gcct---tattgatttaacaaatgtcatgaatgat--t-t-----------------------------------
i Semnopithecus_hypoleucos.k141_1615806                  C 0 I 9
s Semnopithecus_johnii.k141_670120                            3573 38 +     27826 ctc----------a------gcct---tattgatttaacaaatgtcatgaatgat--t-t-----------------------------------
i Semnopithecus_johnii.k141_670120                       C 0 I 9
s Semnopithecus_priam.k141_638794                             3094 38 -     19483 ctc----------a------gcct---tattgatttaacaaatgtcatgaatgat--t-t-----------------------------------
i Semnopithecus_priam.k141_638794                        C 0 I 9
s Semnopithecus_schistaceus.k141_1584426                      3156 38 +      7198 ctc----------a------gcct---tattgatttaacaaatgtcatgaatgat--t-t-----------------------------------
i Semnopithecus_schistaceus.k141_1584426                 C 0 I 9
s Semnopithecus_vetulus.k141_1200928                         11416 38 +     15514 ctc----------a------gcct---tattgatttaacaaatgtcatgaatgat--t-t-----------------------------------
i Semnopithecus_vetulus.k141_1200928                     C 0 I 9
s Sigmodon_hispidus.SigHis_scaffold_60841                    10122 29 -     12148 GCTTGTT-TGT--TTTGGGGGTAT---TGATGttt------------------------------------------------------------
i Sigmodon_hispidus.SigHis_scaffold_60841                I 38 I 260
s Spermophilus_dauricus.KZ294078.1                         1949593 52 -   3870691 gtc----------t------gaat---tactgttttg-------ttatgaataat--t-g-----t-ttttgttttt--tttt-aac--a---at
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1089621 42 -   1523678 ctc----------g------gcct---tattgttttaacaaatatcacgaatgat--t-t----tt-t-----------t---------------
i Symphalangus_syndactylus.tarseq_199                    C 0 I 5
s Tarsius_lariang.k141_2201908                               11874 37 +     70052 ------------------------------gatttttacaagcatcatgaagatt--t-t-----t-t-----------tct---ac--a---ac
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               16179 37 +     25099 ------------------------------gatttttacaagcatcatgaagatt--t-t-----t-t-----------tct---ac--a---ac
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186424740 49 + 186847797 CTC----------A------GCCT---TATTGTTTTAACCAATGtcatgaatgaa--t-t----tt-t-----------tttt---c--g---aT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          7147 38 -     20410 ctc----------a------gcct---tattgatttaacaaatgtcatgaatgat--t-t-----------------------------------
i Trachypithecus_auratus.k141_722599                     C 0 I 9
s Trachypithecus_crepusculus.k141_1194022                    11343 38 +     15221 ctc----------a------gcct---tattgatttaacaaatgtcatgaatgat--t-t-----------------------------------
i Trachypithecus_crepusculus.k141_1194022                C 0 I 8
s Trachypithecus_cristatus.k141_580354                        7248 38 +     19930 ctc----------a------gcct---tattgatttaacaaatgtcatgaatgat--t-t-----------------------------------
i Trachypithecus_cristatus.k141_580354                   C 0 I 9
s Trachypithecus_francoisi.k141_1412647                       3678 38 -     19997 ctc----------a------gcct---tattgatttaacaaatgtcatgaatgat--t-t-----------------------------------
i Trachypithecus_francoisi.k141_1412647                  C 0 I 9
s Trachypithecus_geei.k141_277701                            43797 38 -     60166 ctc----------a------gcct---tattgatttaacaaatgtcatgaatgat--t-t-----------------------------------
i Trachypithecus_geei.k141_277701                        C 0 I 9
s Trachypithecus_germaini.k141_912491                        11268 38 -     27529 ctc----------a------gcct---tattgatttaacaaatgtcatgaatgat--t-t-----------------------------------
i Trachypithecus_germaini.k141_912491                    C 0 I 9
s Trachypithecus_hatinhensis.k141_143409                     11210 38 -     18194 ctc----------a------gcct---tattgatttaacaaatgtcatgaatgat--t-t-----------------------------------
i Trachypithecus_hatinhensis.k141_143409                 C 0 I 9
s Trachypithecus_laotum.k141_907409                           4945 38 -     21137 ctc----------a------gcct---tattgatttaacaaatgtcatgaatgat--t-t-----------------------------------
i Trachypithecus_laotum.k141_907409                      C 0 I 9
s Trachypithecus_leucocephalus.k141_587342                    3648 38 -     10723 ctc----------a------gcct---tattgatttaacaaatgtcatgaatgat--t-t-----------------------------------
i Trachypithecus_leucocephalus.k141_587342               C 0 I 9
s Trachypithecus_melamera.k141_434728                         2800 38 +      9834 ctc----------a------gcct---tattgatttaacaaatgtcatgaatgat--t-t-----------------------------------
i Trachypithecus_melamera.k141_434728                    C 0 I 9
s Trachypithecus_obscurus.k141_190785                        21119 38 +     32220 ctc----------a------gcct---tattgatttaacaaatgtcatgaatgat--t-t-----------------------------------
i Trachypithecus_obscurus.k141_190785                    C 0 I 9
s Trachypithecus_phayrei.ctg124                            5935215 38 +   6242583 ctc----------a------gcct---tattgatttaacaaatgtcatgaatgat--t-t-----------------------------------
i Trachypithecus_phayrei.ctg124                          C 0 I 9
s Trachypithecus_pileatus.k141_2007326                        4462 38 +     20839 ctc----------a------gcct---tattgatttaacaaatgtcatgaatgat--t-t-----------------------------------
i Trachypithecus_pileatus.k141_2007326                   C 0 I 9
s Tupaia_chinensis.KB320699.1                              2151765 41 +   4065304 gtc----------t------gcct---taccgttttactcagtgtcgtaaatcat--t-t-----c-t-----------t---------------
i Tupaia_chinensis.KB320699.1                            C 0 I 7
s Tupaia_tana.TupTan_flattened_line_97126                     5072 41 -     10553 gtc----------t------gcct---taccgttttactcagtgtcgtaaatcat--t-t-----t-t-----------t---------------
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 7
s Varecia_rubra.k141_590885                                   8236 51 +     50397 gtc----------t------gctt---ttctattttaagaagcgtcatgattaat--t-t-----t-t-----------tctt---t--aTCGAT
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              8291 51 +     24756 gtc----------t------gctt---ttctattttaagaagcgtcatgattaat--t-t-----t-t-----------tctt---c--aTCGAT
i Varecia_variegata.k141_1128296                         C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        20976 43 -     24430 gtc----------t------gaat---tactctttta-------tcatgaataat--t-g-----t-t-----------ttttt-aC--A---AT
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      11880 17 +     63895 gtc----------t------gcct---taTTTCTTT-----------------------------------------------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 9 I 2
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519  0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188  0 +      1777 C
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zalophus_californianus.ZalCal_flattened_line_17732          2475  0 +     86975 C
e Vulpes_lagopus.VulLag_flattened_line_30954                  8219  0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5369239  0 -   5488506 C
e Ursus_maritimus.KK499267.1                               4847767  0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   52374  0 -     77625 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   2797  0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    384502  0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      116051  0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 70231  0 +    116680 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                 7643  0 +     41958 C
e Sus_scrofa.JH118708.1                                      32590  0 -     47482 C
e Suricata_suricatta.SurSur_flattened_line_6629              15608  0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             28038  0 +     97271 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_5840            188497  0 -    191337 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152174  0 -    313613 C
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                85541  0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20271604  0 -  38429054 C
e Pteropus_vampyrus.KN525825.1                             1357630  0 +   4952924 C
e Pteropus_alecto.KB030862.1                              22974540  0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         37522  0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            12065  0 -     21811 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9940  0 -     78924 C
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Panthera_tigris.KE722367.1                               4718322  0 -   8748460 C
e Panthera_pardus.KV860321.1                                261685  0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  148478  0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       459559  0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              503905  0 -   2017862 C
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1359220  0 +   3988456 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9146805  0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    757209  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186877  0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               298505  0 -  14710649 C
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   32702  0 +     37127 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 138676  0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         2599  0 -      8324 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11256644 174 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12178700 925 -  29670104 I
e Mellivora_capensis.MelCap_flattened_line_69365              7322  0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                         7651  0 -    207569 C
e Manis_pentadactyla.KN006162.1                              48157  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              16772  0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 88359  0 +     94391 C
e Lycaon_pictus.CM007581.1                                17952544  0 -  59628241 C
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3039763  0 +   3914936 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  41757  0 +     55795 C
e Hipposideros_galeritus.HipGal_scaffold_29171               40558  6 +     43066 I
e Hipposideros_armiger.JXIK01000431.1                       109122  6 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               239595  0 +    327341 C
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Galagoides_demidoff.k141_31856                              3354  0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  6829  0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20193317  0 + 205367284 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Equus_przewalskii.KK951119.1                               30446  0 +    498745 C
e Equus_caballus.CM000403.2                               18528431  0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1280610  0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16326615  0 -  41312741 C
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Eidolon_helvum.KE759718.1                                   8270  0 +     11740 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    3324  0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  670569  0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            61937  0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             25769  0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_239572              2140  5 -      5012 I
e Cricetulus_griseus.LT883664.1                           11664308 436 + 224834208 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          11367  0 -     20389 C
e Condylura_cristata.JH655891.1                           17547123  0 -  53390261 C
e Choloepus_hoffmanni.KN194906.1                            171056  0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15957  0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            5629  0 -      6351 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_247804          3434  0 -      3715 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     90107  0 +    217609 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18497604  0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17956304  0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9032039  0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    182653  0 -    185531 C
e CanFam4.chr16                                           17796596  0 -  60362399 C
e Camelus_ferus.KB017975.1                                  400489  0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2332213  0 -   7040546 C
e Camelus_bactrianus.KN276810.1                            9999749  0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Ailurus_fulgens.LNAC01001112.1                             76634  0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9507851  0 -  29979442 C
e Acinonyx_jubatus.LLWD01001279.1                           824607  0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       2959 7 +     62944 GATAAGC
s Acinonyx_jubatus.LLWD01001279.1                           824607 1 -   1699592 ------C
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     67465 4 +     87051 a---tgg
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 252 I 24
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507851 1 -  29979442 ------C
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             76634 1 -    347723 ------C
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     66543 2 -     89534 -----GC
i Allactaga_bullata.AllBul_scaffold_9566                 I 2 C 0
s Allenopithecus_nigroviridis.k141_3361533                   10893 7 -     52922 AATAAGC
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         10823 7 -     28001 AATAAAC
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          1269 7 -     18505 AATAAAC
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           2118 7 -     12518 AATAAAC
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_2038611                             23299 7 +     24414 AATAAGC
i Alouatta_belzebul.k141_2038611                         C 0 C 0
s Alouatta_caraya.k141_885645                                54060 7 +     54689 AATAAGC
i Alouatta_caraya.k141_885645                            C 0 C 0
s Alouatta_discolor.k141_2852575                            124649 7 +    125349 AATAAGC
i Alouatta_discolor.k141_2852575                         C 0 C 0
s Alouatta_juara.k141_1509701                                20994 7 +     25266 AATAAGC
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                            436 7 +      2906 AATAAGC
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            14549 7 -     18578 AATAAGC
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_668256                              17253 7 +     18088 AATAAGC
i Alouatta_palliata.k141_668256                          C 0 C 0
s Alouatta_puruensis.k141_1766044                            18304 7 -     18677 AATAAGC
i Alouatta_puruensis.k141_1766044                        C 0 C 0
s Alouatta_seniculus.k141_117119                             11286 7 +     50774 AATAAGC
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  11915 7 -     33861 AATAAGC
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            11936 7 -     34016 AATAAGC
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4294331 7 -   5030052 aataAGC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             11937 7 -     34685 AATAAGC
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               25058 7 -     47192 AATAAGC
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       8512 4 +     20879 A---AGC
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        16144 4 +     17124 a---AGC
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Avahi_laniger.k141_765380                                  50544 4 -     92717 G---AGC
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              51173 4 +     85213 G---AGC
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             1667 7 -     10423 AGTAAGC
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             21159 7 +     31915 AATAAGC
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            1634 7 +      5267 AGTAAGC
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23586846 7 - 189096842 AGTAAGC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              8378 7 -     12001 AGTAAGC
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s CanFam4.chr16                                           17796596 1 -  60362399 ------C
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182653 1 -    185531 ------C
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9032039 1 -   9314153 ------C
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17956304 1 -  59632846 ------C
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18497604 1 +  63665305 ------C
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           142273 7 -    496798 gGTAAGC
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    134985 4 +    179628 A---AGA
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     90107 1 +    217609 ------C
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          6287 7 -     11392 AGTAAGC
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               2385 7 -      7577 AGTAAGC
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         6184 7 -      8605 aGTAAGC
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12228716 1 +  27778364 ------C
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          3434 1 -      3715 ------C
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4471848 7 +   4669795 aaTAAGC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        10396 7 -     19203 AATAAGC
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           4818 7 +      8260 AATAAGC
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           5045 7 +     27781 AATAAGC
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         5200 7 -     20310 AATAAGC
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           8184 7 +     29689 AATAAGC
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            2612 7 +      9989 AGTAAAC
i Cercopithecus_diana.k141_2427854                       I 3 C 0
s Cercopithecus_hamlyni.k141_187466                          10861 7 -     27936 aATAAGC
i Cercopithecus_hamlyni.k141_187466                      I 3 C 0
s Cercopithecus_lowei.k141_457449                            10891 7 -     11289 AGTAAAC
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38813266 7 +  39242232 AATAAGC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21218962 7 -  21565898 AGTAAAC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       36081 7 -     53127 AGTAAAC
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        3367 7 +      7159 AATAAGC
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       10884 7 -     27947 AGTAAAC
i Cercopithecus_petaurista.k141_807961                   I 15 C 0
s Cercopithecus_pogonias.k141_822820                         10860 7 +     17596 AGTAAAC
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         41361 7 -     41420 AGTAAAC
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            5629 1 -      6351 ------C
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             17966 4 -     52598 G---AGC
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           13315 4 +     57038 G---AGC
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           7306 5 +     11226 AATAA--
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18424822 7 -  18827391 AATAAAC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       11263 7 -     50209 AATAAAC
i Chlorocebus_pygerythrus.k141_1025673                   I 14 C 0
s Chlorocebus_sabaeus.CM001947.1                         135418269 7 + 135778131 aaTAAAC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15957 1 +     19366 ------C
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            171056 1 +    839153 ------C
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1906786 7 +   2368649 AATAAGC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199946455 7 + 200372422 AATAAGC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              33327 7 +     84244 AATAAGC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17547123 1 -  53390261 ------T
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          11367 1 -     20389 ------C
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 47162 4 +     63868 t---gtc
i Cricetomys_gambianus.CriGam_scaffold_18520             I 24 C 0
s Crocidura_indochinensis.CroInd_scaffold_287352              1286 1 +      4208 ------T
i Crocidura_indochinensis.CroInd_scaffold_287352         I 61 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             25769 1 -     87169 ------C
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            61937 1 +   2246927 ------C
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12534143 4 -  12879189 A---AGC
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  670569 1 +   1390856 ------C
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    3324 1 +    198055 ------C
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE759718.1                                   8270 1 +     11740 ------C
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          16707 4 -    110024 a---agg
i Ellobius_lutescens.LOEQ01008920.1                      I 244 I 27
s Ellobius_talpinus.LOJH01109367.1                            2758 4 -      6299 a---agg
i Ellobius_talpinus.LOJH01109367.1                       I 246 I 29
s Enhydra_lutris.KZ291758.1                               16326615 1 -  41312741 ------C
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1280610 1 +   4378816 ------C
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18528431 1 -  39960074 ------C
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               30446 1 +    498745 ------C
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21201464 7 -  21539334 AATAAAC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              10647 4 -     14127 G---AGC
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                3345 4 -     16928 G---AGC
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              12378 4 -     25546 G---AGC
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             9563 4 +     26330 G---AGC
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 10819 4 +     23973 G---AGC
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 9563 4 +     75513 G---AGC
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  7514 4 +     97555 G---AGC
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            10441 4 +     26496 G---AGC
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  1047 4 -     17153 G---AGC
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              10622 4 +    111500 G---AGC
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20234472 1 + 206538554 ------C
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20193317 1 + 205367284 ------C
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  6829 1 -     36744 ------C
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_266699                863 4 +      2098 A---AGC
i Galeopterus_variegatus.GalVar_scaffold_266699          C 0 C 0
s Gorilla_beringei.k141_3596273                              12194 7 -     32273 GATAAGC
i Gorilla_beringei.k141_3596273                          I 10 C 0
s Gorilla_gorilla.LT578341.1                             186334342 7 + 186649187 GATAAGC
i Gorilla_gorilla.LT578341.1                             I 10 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   31296 4 +     78134 A---AGT
i Graphiurus_murinus.GraMur_scaffold_10447               I 11 C 0
s Hapalemur_alaotrensis.k141_170648                           3710 4 -     19426 G---AGC
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              8854 4 -     15286 G---AGC
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             10492 4 +     18253 G---AGC
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         10595 4 -     41752 G---AGC
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         10428 4 -     16460 G---AGC
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               239595 1 +    327341 ------C
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hoolock_leuconedys.ctg274                                    431037 7 +    630532 GATAAGC
i Hoolock_leuconedys.ctg274                                 I 5 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  41757 1 +     55795 ------C
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_307679                               13971 7 -     15490 GATAAGC
i Hylobates_agilis.k141_307679                           I 6 C 0
s Hylobates_klossii.k141_282416                              55976 7 +     67168 GATAAGC
i Hylobates_klossii.k141_282416                          I 5 C 0
s Hylobates_pileatus_b.LG02                                     189539626 7 - 191637585 GATAAGC
i Hylobates_pileatus_b.LG02                                     I 5 C 0
s Hylobates_pileatus_a.tarseq_633                            3332519 7 -  11177569 GATAAGC
i Hylobates_pileatus_a.tarseq_633                          I 5 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7516559 4 -   7955117 a---agc
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   19406 4 +     31101 G---AGT
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8272885 2 -   9596543 -----AC
i Jaculus_jaculus.JH725527.1                             I 2 C 0
s Lemur_catta.scaffold_24                                 15520956 4 -  30322482 G---AGC
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        4073 7 +     64341 AATAAGC
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           1133 7 +      4941 AATAAGC
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4001 7 +     35603 AATAAGC
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    25431 7 +     38576 AATAAGC
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         22128 7 +     66356 AATAAGC
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          7865 4 -     23766 G---AGC
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             25812 4 +     45836 G---AGC
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_320948                            74 4 -      1719 G---AGC
i Lepilemur_ruficaudatus.k141_320948                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      23867 4 +     54090 G---AGC
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3039763 1 +   3914936 ------C
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                              1433394 7 +   1826925 AATAAGC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            2376 4 +     11245 a---AGC
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1001213 4 +   6120653 a---AGC
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17952544 1 -  59628241 ------C
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               3215 7 +     40492 AATAAGC
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59672469 7 +  60120075 AATAAGC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  8971 7 -     26193 AATAAGC
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            76767 7 -    114318 AATAAGC
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  2482 7 -     23192 AATAAGC
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                11934 7 -     29190 AATAAGC
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  20502 7 +     37952 AATAAGC
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186835590 7 + 187317192 AATAAGC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25454153 7 -  25927173 AATAAGC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  76351 7 +     89720 AATAAGC
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 3348 7 +     20474 AATAAGC
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   3150 7 -     14993 AATAAGC
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  326021 7 -    668171 AATAAGC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 1452 7 -     24072 AATAAGC
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               22089 7 -     45290 AATAAGC
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88359 1 +     94391 ------C
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23933637 7 -  24302211 AATAAGC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               347813 7 +    752769 AATAAGC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              16772 1 +    737560 ------C
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              48157 1 -    317179 ------C
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33098871 4 -  40650429 a---aGC
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         7651 1 -    207569 ------C
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              7322 1 +     13704 ------C
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 29080 4 +    140813 A---TGC
i Meriones_unguiculatus.MerUng_scaffold_7390             I 247 I 11
s Mesocricetus_auratus.KB708134.1                         12179625 2 -  29670104 A---A--
i Mesocricetus_auratus.KB708134.1                        I 925 I 3
s Mico_argentatus.k141_1239457                                2213 7 -      7380 AGTAAGC
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               1283 7 +     18990 AGTAAGC
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      2218 7 -      7356 AGTAAGC
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18288339 4 -  93316391 G---AGC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11256818 4 -  27267610 a---agc
i Microtus_ochrogaster.CM001695.1                        I 174 I 67
s Miopithecus_ogouensis.k141_534055                           5390 7 -     28506 AATAAAC
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         2599 1 -      8324 ------C
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      5909 4 -     37649 G---AGC
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138676 1 -    366855 ------C
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   32702 1 +     37127 ------C
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Mus_caroli.LT608237.1                                   84358173 2 - 120012414 a---t--
i Mus_caroli.LT608237.1                                  I 272 C 0
s Mus_musculus.chr8                                       87647155 2 - 129401213 a---t--
i Mus_musculus.chr8                                      I 278 C 0
s Mus_pahari.LT608297.1                                   31351410 2 -  89631738 a---t--
i Mus_pahari.LT608297.1                                  I 279 C 0
s Mus_spretus.CM004101.1                                  90749222 2 - 130317789 a---t--
i Mus_spretus.CM004101.1                                 I 282 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              3621 4 +     14296 A---AGC
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 10 C 0
s Mustela_putorius.JH418006.1                               298505 1 -  14710649 ------C
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186877 1 +    196477 ------C
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 I 1
s Nasalis_larvatus.k141_413338                               11387 7 +     21681 AATAAGC
i Nasalis_larvatus.k141_413338                           I 9 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    757209 1 +    783361 ------C
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146805 1 -   9404916 ------C
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102576196 4 - 196305487 a---AGC
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             3882 4 +      8486 a---AGC
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105746623 4 + 199412804 a---GGC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                              503905 1 -   2017862 ------C
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   20904 4 +     28053 a---aag
i Ondatra_zibethicus.OndZib_scaffold_46174               I 257 I 79
s Onychomys_torridus.OnyTor_scaffold_2986                    76410 4 +    102263 A---AGG
i Onychomys_torridus.OnyTor_scaffold_2986                I 235 I 11
s Otocyon_megalotis.JAEUCK010005147.1                       459559 1 -    559221 ------C
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Pan_paniscus.KQ411613.1                                    40311 7 +     80009 GAGAAGC
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189139203 7 + 189151597 GATAAGC
i Pan_troglodytes.CM009242.2                             I 46 I 27
s Panthera_onca.PanOnc_flattened_line_3271                  148478 1 +    230217 ------C
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                261685 1 +  18783137 ------C
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4718322 1 -   8748460 ------C
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183439423 7 + 183742232 AATAAGC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             3116 7 +     20448 AATAAGC
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20559921 7 +  20919399 AATAAGC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   1859 7 +     41871 AATAAGC
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     5145 7 +     27711 AATAAGC
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  5225 7 +      9205 AATAAGC
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9940 1 -     78924 ------C
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            6377 4 +     13100 a---AGC
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             4750 4 +     25941 a---AGC
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18190969 4 -  18517816 a---agg
i Peromyscus_maniculatus.KI615324.1                      I 255 I 11
s Piliocolobus_badius.k141_1234363                           39899 7 +     62158 AATAAGC
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        34621 7 +     89929 AATAAGC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            36037 7 +     51399 AATAAGC
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14292275 7 -  14605196 aaTAAGC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189127352 7 + 189387572 gataaGC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9566960 7 +   9816681 GATAAGC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               69549 7 -     81375 AATAAGC
i Presbytis_comata.k141_677006                           I 9 C 0
s Presbytis_mitrata.k141_1087752                              1369 7 +     19060 AATAAGC
i Presbytis_mitrata.k141_1087752                         I 9 C 0
s Prolemur_simus.MPIZ01000396.1                            2593608 4 -   4620579 G---AGC
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     987604 4 +   2598838 g---AGC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          25908 4 +     38485 G---AGC
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             2067 4 +      4256 G---AGC
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          23427 4 +     35766 G---AGC
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           1610 4 -     24134 G---AGC
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        25422 4 -     67325 G---AGC
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           1667 4 -      6182 G---AGC
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             6731 4 -     21651 a---tgc
i Psammomys_obesus.NESX01036370.1                        I 257 I 11
s Pteronotus_parnellii.KE909381.1                            12065 1 -     21811 ------C
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         37522 1 +     42204 ------C
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22974540 1 +  28871421 ------C
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1357630 1 +   4952924 ------C
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20271604 1 -  38429054 ------C
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             11380 7 -     91421 AATAAGC
i Pygathrix_cinerea.k141_1153803                         I 9 C 0
s Pygathrix_nigripes_b.ctg100                                 7605508 7 +   7812017 AATAAGC
i Pygathrix_nigripes_b.ctg100                               I 9 C 0
s Pygathrix_nigripes_a.k141_215492                             11356 7 -     72585 AATAAGC
i Pygathrix_nigripes_a.k141_215492                         I 9 C 0
s Rattus_norvegicus.chr16                                 53567094 4 +  90668790 a---ttc
i Rattus_norvegicus.chr16                                I 233 I 154
s Rhinopithecus_bieti.k119_217274                             3064 7 -     11128 AATAAGC
i Rhinopithecus_bieti.k119_217274                        I 9 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91232419 7 - 195417433 AATAAGC
i Rhinopithecus_roxellana.NC_044550.1                    I 9 C 0
s Rhinopithecus_strykeri.ctg102                            7668068 7 +   7961872 AATAAGC
i Rhinopithecus_strykeri.ctg102                          I 9 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85541 1 -     96226 ------C
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               4331 5 -      8359 AATAA--
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            10638 7 -     13588 AATAAGC
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              4274 7 -      6207 AATAAGC
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               10001 7 +     13640 AATAAGC
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               4864 7 +      8564 AATAAGC
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209465142 7 + 209938924 AATAAGC
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 4354 7 -      9399 AATAAGC
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 1503 7 +      3421 AATAAGC
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119947702 7 - 121099817 aacaAGC
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       20169 7 +     46362 AACAAGC
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               20264 7 +     45824 AACAAGC
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             36879 7 -     64574 AACAAGC
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_1888710                              19100 7 -     19356 AACAAGC
i Saimiri_sciureus.k141_1888710                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 20157 7 -     61129 AACAAGC
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    152174 1 -    313613 ------C
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          15892 7 -     19888 AATAAGC
i Semnopithecus_entellus.k141_11662                      I 9 C 0
s Semnopithecus_hypoleucos.k141_1615806                      23094 7 +     39453 AATAAGC
i Semnopithecus_hypoleucos.k141_1615806                  I 9 C 0
s Semnopithecus_johnii.k141_670120                            3620 7 +     27826 AATAAGC
i Semnopithecus_johnii.k141_670120                       I 9 C 0
s Semnopithecus_priam.k141_638794                             3141 7 -     19483 AATAAGC
i Semnopithecus_priam.k141_638794                        I 9 C 0
s Semnopithecus_schistaceus.k141_1584426                      3203 7 +      7198 AATAAGC
i Semnopithecus_schistaceus.k141_1584426                 I 9 C 0
s Semnopithecus_vetulus.k141_1200928                         11463 7 +     15514 AATAAGC
i Semnopithecus_vetulus.k141_1200928                     I 9 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    10411 4 -     12148 A---AGG
i Sigmodon_hispidus.SigHis_scaffold_60841                I 260 I 29
s Solenodon_paradoxus.SolPar_flattened_line_5840            188497 1 -    191337 ------T
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1949645 4 -   3870691 a---agc
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             28038 1 +     97271 ------C
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              15608 1 -    196729 ------C
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.JH118708.1                                      32590 1 -     47482 ------C
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1089668 7 -   1523678 GATAAGC
i Symphalangus_syndactylus.tarseq_199                    I 5 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 7643 1 +     41958 ------C
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 70231 1 +    116680 ------C
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 I 1
s Tapirus_indicus.TapInd_scaffold_9301                      116051 1 -    156842 ------C
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    384502 1 +    539355 ------C
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               11911 7 +     70052 aGTAAGC
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               16216 7 +     25099 aGTAAGC
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186424789 7 + 186847797 AATAAGC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   2797 1 +      8208 ------C
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Trachypithecus_auratus.k141_722599                          7194 7 -     20410 AATAAGC
i Trachypithecus_auratus.k141_722599                     I 9 C 0
s Trachypithecus_crepusculus.k141_1194022                    11389 7 +     15221 AATAAGC
i Trachypithecus_crepusculus.k141_1194022                I 8 C 0
s Trachypithecus_cristatus.k141_580354                        7295 7 +     19930 AATAAGC
i Trachypithecus_cristatus.k141_580354                   I 9 C 0
s Trachypithecus_francoisi.k141_1412647                       3725 7 -     19997 AATAAGC
i Trachypithecus_francoisi.k141_1412647                  I 9 C 0
s Trachypithecus_geei.k141_277701                            43844 7 -     60166 AATAAGC
i Trachypithecus_geei.k141_277701                        I 9 C 0
s Trachypithecus_germaini.k141_912491                        11315 7 -     27529 AATAAGC
i Trachypithecus_germaini.k141_912491                    I 9 C 0
s Trachypithecus_hatinhensis.k141_143409                     11257 7 -     18194 AATAAGC
i Trachypithecus_hatinhensis.k141_143409                 I 9 C 0
s Trachypithecus_laotum.k141_907409                           4992 7 -     21137 AATAAGC
i Trachypithecus_laotum.k141_907409                      I 9 C 0
s Trachypithecus_leucocephalus.k141_587342                    3695 7 -     10723 AATAAGC
i Trachypithecus_leucocephalus.k141_587342               I 9 C 0
s Trachypithecus_melamera.k141_434728                         2847 7 +      9834 AATAAGC
i Trachypithecus_melamera.k141_434728                    I 9 C 0
s Trachypithecus_obscurus.k141_190785                        21166 7 +     32220 AATAAGC
i Trachypithecus_obscurus.k141_190785                    I 9 C 0
s Trachypithecus_phayrei.ctg124                            5935262 7 +   6242583 AATAAGC
i Trachypithecus_phayrei.ctg124                          I 9 C 0
s Trachypithecus_pileatus.k141_2007326                        4509 7 +     20839 AATAAGC
i Trachypithecus_pileatus.k141_2007326                   I 9 C 0
s Tupaia_chinensis.KB320699.1                              2151813 4 +   4065304 a---AGT
i Tupaia_chinensis.KB320699.1                            I 7 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     5120 4 -     10553 a---AGT
i Tupaia_tana.TupTan_flattened_line_97126                I 7 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   52374 1 -     77625 ------C
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4847767 1 -   5085361 ------C
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   8287 4 +     50397 G---AGC
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              8342 4 +     24756 G---AGC
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  8219 1 -     43706 ------C
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        21019 4 -     24430 A---AGC
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          2475 1 +     86975 ------C
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      11899 2 +     63895 -----GC
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 2 C 0
e Sapajus_macrocephalus.k141_351809                          54316 0 -     80660 C
e Sapajus_apella.ctg103                                    5419275 0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519 0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188 0 +      1777 C
e Cebus_albifrons.Contig27                                25650611 0 +  26074798 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906 0 -     10935 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Vicugna_pacos.KN270157.1                                 5369239 0 -   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553 7 +    610378 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937 0 +    114563 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10240 0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823 1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813 0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1359220 0 +   3988456 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805 0 +       996 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016 1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456 1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390 1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692 1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520 1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686 0 +   8254450 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009 7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Loxodonta_africana.GL010049.1                            4214777 0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547 0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_29171               40558 6 +     43066 I
e Hipposideros_armiger.JXIK01000431.1                       109122 6 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491 0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Galagoides_demidoff.k141_31856                              3354 0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447 1 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1089268 0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084 0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495 7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11664308 436 + 224834208 I
e Chinchilla_lanigera.JH722012.1                           1251498 0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157 0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465 7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Camelus_ferus.KB017975.1                                  400489 0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2332213 0 -   7040546 C
e Camelus_bactrianus.KN276810.1                            9999749 0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102 7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691 7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       2966 10 +     62944 TA---GACT-TCc----t
s Acinonyx_jubatus.LLWD01001279.1                           824608  8 -   1699592 TG---GACC-AC------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 1
s Acomys_cahirinus.AcoCah_scaffold_12655                     67493 10 +     87051 tgtgtgtgt--g------
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 24 I 1
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507852  8 -  29979442 TG---GACC-AC------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 1
s Ailurus_fulgens.LNAC01001112.1                             76635  8 -    347723 TG---GACC-AC------
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 1
s Allactaga_bullata.AllBul_scaffold_9566                     66545  7 -     89534 TG---TTTT--G------
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 6
s Allenopithecus_nigroviridis.k141_3361533                   10900 10 -     52922 TA---GACT-TCC----C
i Allenopithecus_nigroviridis.k141_3361533               C 0 I 2
s Allochrocebus_lhoesti.k141_4309873                         10830 10 -     28001 TA---GACT-TCC----t
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          1276 10 -     18505 TA---GACT-TCC----t
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           2125 10 -     12518 TA---GACT-TCC----t
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_2038611                             23306  9 +     24414 TA---GACT-TC-----t
i Alouatta_belzebul.k141_2038611                         C 0 C 0
s Alouatta_caraya.k141_885645                                54067  9 +     54689 TA---GACT-TC-----t
i Alouatta_caraya.k141_885645                            C 0 C 0
s Alouatta_discolor.k141_2852575                            124656  9 +    125349 TA---GACT-TC-----t
i Alouatta_discolor.k141_2852575                         C 0 C 0
s Alouatta_juara.k141_1509701                                21001  9 +     25266 TA---GACT-TC-----t
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                            443  9 +      2906 TA---GACT-TC-----t
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            14556  9 -     18578 TA---GACT-TC-----t
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_668256                              17260  9 +     18088 TA---GACT-TC-----t
i Alouatta_palliata.k141_668256                          C 0 C 0
s Alouatta_puruensis.k141_1766044                            18311  9 -     18677 TA---GACT-TC-----t
i Alouatta_puruensis.k141_1766044                        C 0 C 0
s Alouatta_seniculus.k141_117119                             11293  9 +     50774 TA---GACT-TC-----t
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  11922  9 -     33861 TA---GACT-TC-----T
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            11943  9 -     34016 TA---GACT-TC-----T
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4294338  9 -   5030052 TA---GACT-TC-----T
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             11944  9 -     34685 TA---GACT-TC-----T
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               25065  9 -     47192 TA---GACT-TC-----T
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       8516  8 +     20879 TG---TACT-GC------
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 1
s Arctocebus_calabarensis.k141_288239                        16148  9 +     17124 CA---GACC-AC-----T
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Avahi_laniger.k141_765380                                  50548  9 -     92717 TG---GACC-ac-----t
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              51177  9 +     85213 TG---GACC-ac-----t
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             1674  9 -     10423 TA---GACT-TC-----t
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             21166  9 +     31915 TG---GACT-TC-----t
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            1641  9 +      5267 TA---GACT-TC-----t
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23586853  9 - 189096842 TA---GACT-TC-----T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              8385  9 -     12001 TA---GACT-TC-----t
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s CanFam4.chr16                                           17796597  8 -  60362399 TG---GACC-ac------
i CanFam4.chr16                                          C 0 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182654  8 -    185531 TG---GACC-ac------
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 I 1
s Canis_lupus_dingo.QKWQ01000480.1                         9032040  8 -   9314153 TG---GACC-ac------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 1
s Canis_lupus_familiaris.chr16                            17956305  8 -  59632846 TG---GACC-ac------
i Canis_lupus_familiaris.chr16                           C 0 I 1
s Canis_lupus_orion.HG994398.1                            18497605  8 +  63665305 TG---GACC-ac------
i Canis_lupus_orion.HG994398.1                           C 0 I 1
s Carlito_syrichta.NW_007259797.1                           142280  9 -    496798 TG---GACC-AC-----t
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    134989  8 +    179628 TG---GACt-ac------
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 1
s Catagonus_wagneri.CatWag_scaffold_2839                     90108  8 +    217609 TG---GACC-AC------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 1
s Cebuella_niveiventris.k141_1251222                          6294  9 -     11392 TA---GACT-TC-----t
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               2392  9 -      7577 TA---GACT-TC-----t
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         6191  9 -      8605 TG---GACC-ac-----t
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12228717  8 +  27778364 TG---GACC-ac------
i Ceratotherium_simum.JH767749.1                         C 0 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          3435  8 -      3715 TG---GACC-AC------
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 I 1
s Cercocebus_atys.KQ010504.1                               4471855 10 +   4669795 TA---GACT-TCC----T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        10403 10 -     19203 TA---GACT-TCC----t
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           4825 10 +      8260 TA---GACT-TCC----t
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           5052 10 +     27781 TA---GACT-TCC----t
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         5207 10 -     20310 TA---GACT-TCC----T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           8191 10 +     29689 TA---GACT-TCC----T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            2619 10 +      9989 TA---GACT-TCC----t
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          10868 10 -     27936 TA---GACT-TCC----t
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                            10898 10 -     11289 TA---GACT-TCC----t
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38813273 10 +  39242232 TA---GACT-TCC----T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21218969 10 -  21565898 TA---GACT-TCC----t
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       36088 10 -     53127 TA---GACT-TCC----t
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        3374 10 +      7159 TA---GACT-TCC----T
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       10891 10 -     27947 TA---GACT-TCC----t
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         10867 10 +     17596 TA---GACT-TCC----t
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         41368 10 -     41420 TA---GACT-TCC----T
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            5630  8 -      6351 TA---GGCC-AC------
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 I 1
s Cheirogaleus_major.k141_333249                             17970  9 -     52598 TG---GACC-AC-----T
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           13319  9 +     57038 TG---GACC-ac-----t
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           7311  9 +     11226 TA---CACT-TC-----t
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18424829 10 -  18827391 TA---GACT-TCC----t
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       11270 10 -     50209 TA---GACT-TCC----t
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135418276 10 + 135778131 TA---GACT-TCC----T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15958  8 +     19366 TG---GACC-AC------
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 I 1
s Choloepus_hoffmanni.KN194906.1                            171057  8 +    839153 TG---GACC-AC------
i Choloepus_hoffmanni.KN194906.1                         C 0 I 1
s Colobus_angolensis.KN981557.1                            1906793 10 +   2368649 TA---GACT-TCC----T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199946462 10 + 200372422 TA---TACT-TCC----t
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              33334 10 +     84244 TA---TACT-TCC----t
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17547124  4 -  53390261 TG---G-C----------
i Condylura_cristata.JH655891.1                          C 0 I 1
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          11368  8 -     20389 TG---GACC-AT------
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 47166 10 +     63868 tgtgtgtgt--c------
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 1
s Crocidura_indochinensis.CroInd_scaffold_287352              1287  3 +      4208 T-----GT----------
i Crocidura_indochinensis.CroInd_scaffold_287352         C 0 I 55
s Cryptoprocta_ferox.CryFer_flattened_line_16129             25770  8 -     87169 TG---GACC-AC------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 1
s Dasypus_novemcinctus.JH564415.1                            61938  8 +   2246927 TA---GACC-AC------
i Dasypus_novemcinctus.JH564415.1                        C 0 I 1
s Daubentonia_madagascariensis.ctg71                      12534147  9 -  12879189 TG---AACC-ac-----t
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  670570  8 +   1390856 TG---GATC-ac------
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 1
s Diceros_bicornis.DicBicMic_scaffold_5955                    3325  8 +    198055 TG---GACC-AC------
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 1
s Eidolon_helvum.KE759718.1                                   8271  8 +     11740 TG---GACC-AC------
i Eidolon_helvum.KE759718.1                              C 0 I 1
s Enhydra_lutris.KZ291758.1                               16326616  8 -  41312741 TA---GACC-AC------
i Enhydra_lutris.KZ291758.1                              C 0 I 1
s Equus_asinus.JREZ01000139.1                              1280611  8 +   4378816 TA---GACC-ac------
i Equus_asinus.JREZ01000139.1                            C 0 I 1
s Equus_caballus.CM000403.2                               18528432  8 -  39960074 TA---GACC-ac------
i Equus_caballus.CM000403.2                              C 0 I 1
s Equus_przewalskii.KK951119.1                               30447  8 +    498745 TA---GACC-ac------
i Equus_przewalskii.KK951119.1                           C 0 I 1
s Erythrocebus_patas.Contig38                             21201471 10 -  21539334 TA---GACT-TCC----t
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              10651  9 -     14127 TG---GACC-ac-----t
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                3349  9 -     16928 TG---GACC-AC-----t
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              12382  9 -     25546 TG---GACC-ac-----t
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             9567  9 +     26330 TG---GACC-at-----t
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 10823  9 +     23973 TG---GACC-ac-----t
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 9567  9 +     75513 TG---GACC-at-----t
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  7518  9 +     97555 TG---GACC-ac-----t
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            10445  9 +     26496 TG---GACC-AC-----T
i Eulemur_rubriventer.k141_571033                        C 0 I 1
s Eulemur_rufus.k141_1476633                                  1051  9 -     17153 TG---GACC-ac-----t
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              10626  9 +    111500 TG---GACC-AC-----C
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20234473  8 + 206538554 TG---GACC-ac------
i Felis_catus.CM001381.2                                 C 0 I 1
s Felis_catus_fca126.CM031415.1                           20193318  8 + 205367284 TG---GACC-ac------
i Felis_catus_fca126.CM031415.1                          C 0 I 1
s Felis_nigripes.FelNig_flattened_line_20823                  6830  8 -     36744 TG---GACC-AC------
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 1
s Galeopterus_variegatus.GalVar_scaffold_266699                867 13 +      2098 TG---GACC-AT-TAatt
i Galeopterus_variegatus.GalVar_scaffold_266699          C 0 C 0
s Gorilla_beringei.k141_3596273                              12201 10 -     32273 TA---GACT-TCC----t
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186334349 10 + 186649187 TA---GACT-TCC----t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   31300  9 +     78134 TG---CACTTAC------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 1
s Hapalemur_alaotrensis.k141_170648                           3714  9 -     19426 TG---GACC-ac-----t
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              8858  9 -     15286 TG---GACC-ac-----t
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             10496  9 +     18253 TG---GACC-ac-----t
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         10599  9 -     41752 TG---GACC-ac-----t
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         10432  9 -     16460 TG---GACC-ac-----t
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               239596  8 +    327341 TG---GACC-AC------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 1
s Hoolock_leuconedys.ctg274                                    431044 10 +    630532 TA---GACT-TCC----t
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  41758  8 +     55795 TG---GACC-AC------
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 1
s Hylobates_agilis.k141_307679                               13978 10 -     15490 TA---GACT-TCC----t
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              55983 10 +     67168 TA---GACT-TCC----t
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189539633 10 - 191637585 TA---GACT-TCC----t
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3332526 10 -  11177569 TA---GACT-TCC----t
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7516563  8 -   7955117 TT---TACA-Ac------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 1
s Indri_indri.k141_3655594                                   19410  9 +     31101 TG---GACC-ac-----t
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8272887  7 -   9596543 TG---TTTT--C------
i Jaculus_jaculus.JH725527.1                             C 0 I 6
s Lemur_catta.scaffold_24                                 15520960  9 -  30322482 TG---GACC-ac-----t
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        4080  9 +     64341 TA---GACT-TC-----t
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           1140  9 +      4941 TA---GACT-TC-----t
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4008  9 +     35603 TA---GACT-TC-----t
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    25438  9 +     38576 TA---GACT-TC-----t
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         22135  9 +     66356 TA---GACT-TC-----t
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          7869  9 -     23766 TG---GACC-ac-----t
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             25816  9 +     45836 TG---GACC-ac-----t
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_320948                            78  9 -      1719 TG---GACC-ac-----t
i Lepilemur_ruficaudatus.k141_320948                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      23871  9 +     54090 TG---GACC-ac-----t
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3039764  8 +   3914936 TG---GACC-AC------
i Leptonychotes_weddellii.KB714746.1                     C 0 I 1
s Lophocebus_aterrimus.ctg367                              1433401 10 +   1826925 TA---GACT-TCC----t
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            2380  9 +     11245 CA---GACC-ac-----t
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1001217  9 +   6120653 CA---GACC-AC-----T
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17952545  8 -  59628241 TG---GACC-ac------
i Lycaon_pictus.CM007581.1                               C 0 I 1
s Macaca_arctoides.k141_2326796                               3222 10 +     40492 TA---GACT-TCC----t
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59672476 10 +  60120075 TA---GACT-TCC----T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  8978 10 -     26193 TA---GACT-TCC----t
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            76774 10 -    114318 TA---GACT-TCC----t
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  2489 10 -     23192 TA---GACT-TCC----t
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                11941 10 -     29190 TA---GACT-TCC----t
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  20509 10 +     37952 TA---GACT-TCC----t
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186835597 10 + 187317192 TA---GACT-TCC----T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25454160 10 -  25927173 TA---GACT-TCC----T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  76358 10 +     89720 TA---GACT-TCC----t
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 3355 10 +     20474 TA---GACT-TCC----t
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   3157 10 -     14993 TA---GACT-TCC----t
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  326028 10 -    668171 TA---GACT-TCC----t
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 1459 10 -     24072 TA---GACT-TCC----t
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               22096 10 -     45290 TA---GACT-TCC----t
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88360  8 +     94391 TG---GACC-AC------
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 1
s Mandrillus_leucophaeus.scaffold280                      23933644 10 -  24302211 TA---GACT-TCC----t
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               347820 10 +    752769 TA---GACT-TCC----t
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              16773  8 +    737560 TG---GACC-Gt------
i Manis_javanica.JSZB01003497.1                          C 0 I 1
s Manis_pentadactyla.KN006162.1                              48158  8 -    317179 TG---AACC-at------
i Manis_pentadactyla.KN006162.1                          C 0 I 1
s Marmota_marmota.CZRN01000018.1                          33098875  8 -  40650429 TT---TACA-Ac------
i Marmota_marmota.CZRN01000018.1                         C 0 I 1
s Megaderma_lyra.MegLyr_scaffold_4542                         7652  7 -    207569 TG---GACC-A-------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 5
s Mellivora_capensis.MelCap_flattened_line_69365              7323  8 +     13704 TG---GACC-AC------
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 1
s Mico_argentatus.k141_1239457                                2220  9 -      7380 TA---GACT-TC-----t
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               1290  9 +     18990 TA---GACT-TC-----t
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      2225  9 -      7356 TA---GACT-TC-----t
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18288343  9 -  93316391 TG---GCCC-AC-----T
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_534055                           5397 10 -     28506 TA---GACT-TCC----t
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         2600  8 -      8324 TG---GACC-AC------
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 1
s Mirza_zaza.k141_952172                                      5913  9 -     37649 TG---GACC-AC-----T
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138677  8 -    366855 TG---AACC-AC------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 1
s Mungos_mungo.MunMun_flattened_line_23663                   32703  8 +     37127 TG---GACC-AC------
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 1
s Mus_caroli.LT608237.1                                   84358175 10 - 120012414 tgtgtgtgt--g------
i Mus_caroli.LT608237.1                                  C 0 I 1
s Mus_musculus.chr8                                       87647157 10 - 129401213 tgtgtgtgt--g------
i Mus_musculus.chr8                                      C 0 I 1
s Mus_pahari.LT608297.1                                   31351412 10 -  89631738 tgtgtgtgt--g------
i Mus_pahari.LT608297.1                                  C 0 I 1
s Mus_spretus.CM004101.1                                  90749224 10 - 130317789 tgtgtgtgt--g------
i Mus_spretus.CM004101.1                                 C 0 I 1
s Muscardinus_avellanarius.MusAve_scaffold_82313              3625  8 +     14296 TG---CACT-GT------
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 1
s Mustela_putorius.JH418006.1                               298506  8 -  14710649 TG---GACC-AC------
i Mustela_putorius.JH418006.1                            C 0 I 1
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186879  8 +    196477 TG---GACC-AC------
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 1 I 1
s Nasalis_larvatus.k141_413338                               11394 10 +     21681 TA---GACT-TCC----t
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    757210  8 +    783361 TG---GACC-AC------
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 1
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146806  8 -   9404916 TG---GACC-ac------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 1
s Nycticebus_bengalensis.LG01                            102576200  9 - 196305487 CA---GACC-AC-----T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             3886  9 +      8486 CA---GACC-ac-----t
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105746627  9 + 199412804 CA---GACC-AC-----T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                              503906  8 -   2017862 TG---GACC-ac------
i Odobenus_rosmarus.KB229312.1                           C 0 I 1
s Otocyon_megalotis.JAEUCK010005147.1                       459560  8 -    559221 TG---GACC-ac------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 1
s Pan_paniscus.KQ411613.1                                    40318 10 +     80009 TA---GACT-TCC----T
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03001836.1                             26242 10 +     51860 TA---GACT-TCC----T
i Pan_troglodytes.NBAG03001836.1                         I 226 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  148479  8 +    230217 TG---GACC-ac------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 1
s Panthera_pardus.KV860321.1                                261686  8 +  18783137 TG---GACC-ac------
i Panthera_pardus.KV860321.1                             C 0 I 1
s Panthera_tigris.KE722367.1                               4718323  8 -   8748460 TG---GACC-AC------
i Panthera_tigris.KE722367.1                             C 0 I 1
s Papio_anubis.CM001495.2                                183439430 10 + 183742232 TA---GATT-TCC----T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             3123 10 +     20448 TA---GATT-TCC----t
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20559928 10 +  20919399 TA---GATT-TCC----t
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   1866 10 +     41871 TA---GATT-TCC----t
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     5152 10 +     27711 TA---GATT-TCC----t
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  5232 10 +      9205 TA---GACT-TCC----t
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9941  8 -     78924 TG---GACC-AC------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 1
s Perodicticus_ibeanus.k141_855320                            6381  9 +     13100 CA---GACC-AC-----T
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             4754  9 +     25941 CA---GACC-AC-----T
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Piliocolobus_badius.k141_1234363                           39906 10 +     62158 TA---GACT-TCC----t
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        34628 10 +     89929 TA---GACT-TCC----t
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            36044 10 +     51399 TA---GACT-TCC----t
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14292282 10 -  14605196 TA---GACT-TCC----T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189127359 10 + 189387572 TA---GACT-TCC----T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9566967 10 +   9816681 TA---GACT-TCC----t
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               69556 10 -     81375 TA---GACT-TCC----t
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              1376 10 +     19060 TA---GACT-TCC----t
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2593612  9 -   4620579 TG---GAAC-AC-----T
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     987608  9 +   2598838 TG---GACC-AC-----T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          25912  9 +     38485 TG---GACC-ac-----t
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             2071  9 +      4256 TG---GACC-ac-----t
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          23431  9 +     35766 TG---GACC-AC-----t
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           1614  8 -     24134 TG---ga-c-ac-----t
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        25426  9 -     67325 TG---GACC-AC-----t
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           1671  9 -      6182 TG---GACC-ac-----t
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            12066  8 -     21811 TG---GACC-AC------
i Pteronotus_parnellii.KE909381.1                        C 0 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_31117         37523  8 +     42204 TA---GACC-ac------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 1
s Pteropus_alecto.KB030862.1                              22974541  8 +  28871421 TG---GACC-AC------
i Pteropus_alecto.KB030862.1                             C 0 I 1
s Pteropus_vampyrus.KN525825.1                             1357631  8 +   4952924 TG---GACC-AC------
i Pteropus_vampyrus.KN525825.1                           C 0 I 1
s Puma_concolor.QAVW01001104.1                            20271605  8 -  38429054 TG---GACC-AC------
i Puma_concolor.QAVW01001104.1                           C 0 I 1
s Pygathrix_cinerea.k141_1153803                             11387 10 -     91421 TA---GACT-TCC----t
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7605515 10 +   7812017 TA---GACT-TCC----t
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11363 10 -     72585 TA---GACT-TCC----t
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53567252 10 +  90668790 tgtgtgtgt--t------
i Rattus_norvegicus.chr16                                I 154 I 1
s Rhinopithecus_bieti.k119_217274                             3071 10 -     11128 TA---GACT-TCC----t
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91232426 10 - 195417433 TA---GACT-TCC----T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7668075 10 +   7961872 TA---GACT-TCC----t
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85542  8 -     96226 TG---GACC-AC------
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 1
s Saguinus_bicolor.k141_2619299                               4336  9 -      8359 TA---CACT-TC-----t
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            10645  9 -     13588 TA---GACT-TC-----t
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              4281  9 -      6207 TA---CACT-TC-----t
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               10008  9 +     13640 TA---GACT-TC-----t
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               4871  9 +      8564 TA---CACT-TC-----t
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209465149  9 + 209938924 TA---CACT-TC-----t
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 4361  9 -      9399 TA---CACT-TC-----t
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 1510  9 +      3421 TA---GACT-TC-----t
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119947709  9 - 121099817 TA---GACT-TC-----T
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       20176  9 +     46362 TA---GACT-TC-----t
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               20271  9 +     45824 TA---GACT-TC-----t
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             36886  9 -     64574 TA---GACT-TC-----T
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_1888710                              19107  9 -     19356 TA---GACT-TC-----T
i Saimiri_sciureus.k141_1888710                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 20164  9 -     61129 TA---GACT-TC-----t
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    152175  4 -    313613 TG---G-T----------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 1
s Semnopithecus_entellus.k141_11662                          15899 10 -     19888 TA---GACT-TCC----t
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      23101 10 +     39453 TA---GACT-TCC----t
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            3627 10 +     27826 TA---GACT-TCC----t
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             3148 10 -     19483 TA---GACT-TCC----t
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      3210 10 +      7198 TA---GACT-TCC----t
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         11470 10 +     15514 TA---GACT-TCC----t
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            188498  9 -    191337 TG---GACTTAC------
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 I 1
s Spermophilus_dauricus.KZ294078.1                         1949649  8 -   3870691 TT---TACA-AC------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 1
s Spilogale_gracilis.SpiGra_flattened_line_13525             28039  8 +     97271 TG---GAGC-AC------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 1
s Suricata_suricatta.SurSur_flattened_line_6629              15609  8 -    196729 TG---TACC-AC------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 1
s Sus_scrofa.JH118708.1                                      32591  8 -     47482 TG---GACC-AC------
i Sus_scrofa.JH118708.1                                  C 0 I 1
s Symphalangus_syndactylus.tarseq_199                      1089675 10 -   1523678 TA---GACT-TCC----t
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 7644  8 +     41958 TG---GACC-AC------
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 1
s Tamandua_tetradactyla.TamTet_scaffold_1782                 70233  8 +    116680 TG---AACC-GC------
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 1 I 1
s Tapirus_indicus.TapInd_scaffold_9301                      116052  8 -    156842 TG---GACC-AG------
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 1
s Tapirus_terrestris.TapTer_scaffold_755                    384503  8 +    539355 TG---GACC-AG------
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 1
s Tarsius_lariang.k141_2201908                               11918  9 +     70052 TG---GACC-AC-----t
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               16223  9 +     25099 TG---GACC-ac-----t
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186424796 10 + 186847797 TA---GACT-TCC----T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   2798  8 +      8208 TA---GGCC-AC------
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 I 1
s Trachypithecus_auratus.k141_722599                          7201 10 -     20410 TA---GACT-TCC----t
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    11396 10 +     15221 TA---GACT-TCC----t
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        7302 10 +     19930 TA---GACT-TCC----t
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       3732 10 -     19997 TA---GACT-TCC----t
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            43851 10 -     60166 TA---GACT-TCC----t
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        11322 10 -     27529 TA---GACT-TCC----t
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     11264 10 -     18194 TA---GACT-TCC----t
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           4999 10 -     21137 TA---GACT-TCC----t
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    3702 10 -     10723 TA---GACT-TCC----t
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         2854 10 +      9834 TA---GACT-TCC----t
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        21173 10 +     32220 TA---GACT-TCC----t
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5935269 10 +   6242583 TA---GACT-TCC----t
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        4516 10 +     20839 TA---GACT-TCC----t
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2151817  8 +   4065304 TA---GACC-AC------
i Tupaia_chinensis.KB320699.1                            C 0 I 1
s Tupaia_tana.TupTan_flattened_line_97126                     5124  8 -     10553 TA---TACC-ac------
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 1
s Uropsilus_gracilis.UroGra_scaffold_12083                   52375  4 -     77625 TG---A-T----------
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 1
s Ursus_maritimus.KK499267.1                               4847768  8 -   5085361 TG---GACC-AC------
i Ursus_maritimus.KK499267.1                             C 0 I 1
s Varecia_rubra.k141_590885                                   8291  9 +     50397 TG---GACC-ac-----t
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              8346  9 +     24756 TG---GACC-ac-----t
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  8220  8 -     43706 CG---GACC-ac------
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 1
s Xerus_inauris.XerIna_scaffold_48378                        21023  8 -     24430 TG---TACA-AC------
i Xerus_inauris.XerIna_scaffold_48378                    C 0 I 1
s Zalophus_californianus.ZalCal_flattened_line_17732          2476  8 +     86975 TG---GACC-AC------
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 1
s Zapus_hudsonius.ZapHud_scaffold_11398                      11901  7 +     63895 CA---TTTT--T------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 6
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519  0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188  0 +      1777 C
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Vicugna_pacos.KN270157.1                                 5369239  0 -   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    10415 29 -     12148 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Psammomys_obesus.NESX01036370.1                             6735 11 -     21651 I
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18190973 11 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    76414 11 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   20908 79 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1359220  0 +   3988456 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11256822 67 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12179627  3 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 29084 11 +    140813 I
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_29171               40558  6 +     43066 I
e Hipposideros_armiger.JXIK01000431.1                       109122  6 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Galagoides_demidoff.k141_31856                              3354  0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Ellobius_talpinus.LOJH01109367.1                            2762 29 -      6299 I
e Ellobius_lutescens.LOEQ01008920.1                          16711 27 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11664308 436 + 224834208 I
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Camelus_ferus.KB017975.1                                  400489  0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2332213  0 -   7040546 C
e Camelus_bactrianus.KN276810.1                            9999749  0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       2976 17 +     62944 atg---gta--tag--------------------------------t-agaaaa---t
s Acinonyx_jubatus.LLWD01001279.1                           824617 11 -   1699592 GCA---GTG--taa--------------------------------t-a---------
i Acinonyx_jubatus.LLWD01001279.1                        I 1 I 3
s Acomys_cahirinus.AcoCah_scaffold_12655                     67504  9 +     87051 gtgtgtgtg-------------------------------------------------
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 1 I 11
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507861 11 -  29979442 ACA---Gtg--taa--------------------------------t-a---------
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 1 I 6
s Ailurus_fulgens.LNAC01001112.1                             76644 11 -    347723 Cca---gtg--taa--------------------------------a-a---------
i Ailurus_fulgens.LNAC01001112.1                         I 1 I 7
s Allenopithecus_nigroviridis.k141_3361533                   10912 11 -     52922 -----------TAG--------------------------------T-AGAAAA---T
i Allenopithecus_nigroviridis.k141_3361533               I 2 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     66558  6 -     89534 GTG---TTG-------------------------------------------------
i Allactaga_bullata.AllBul_scaffold_9566                 I 6 I 27
s Allochrocebus_lhoesti.k141_4309873                         10840 17 -     28001 atg---gta--tag--------------------------------t-agaaaa---t
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          1286 17 -     18505 atg---gta--tag--------------------------------t-agaaaa---t
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           2135 17 -     12518 atg---gta--tag--------------------------------t-agaaaa---t
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_2038611                             23315 16 +     24414 atg---gtg--tta--------------------------------t-agaaa----t
i Alouatta_belzebul.k141_2038611                         C 0 C 0
s Alouatta_caraya.k141_885645                                54076 16 +     54689 atg---gtg--tta--------------------------------t-agaaa----t
i Alouatta_caraya.k141_885645                            C 0 C 0
s Alouatta_discolor.k141_2852575                            124665 16 +    125349 atg---gtg--tta--------------------------------t-agaaa----t
i Alouatta_discolor.k141_2852575                         C 0 C 0
s Alouatta_juara.k141_1509701                                21010 16 +     25266 atg---gtg--tta--------------------------------t-agaaa----t
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                            452 16 +      2906 atg---gtg--tta--------------------------------t-agaaa----t
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            14565 16 -     18578 atg---gtg--tta--------------------------------t-agaaa----t
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_668256                              17269 16 +     18088 atg---gtg--tta--------------------------------t-agaaa----t
i Alouatta_palliata.k141_668256                          C 0 C 0
s Alouatta_puruensis.k141_1766044                            18320 16 -     18677 atg---gtg--tta--------------------------------t-agaaa----t
i Alouatta_puruensis.k141_1766044                        C 0 C 0
s Alouatta_seniculus.k141_117119                             11302 16 +     50774 atg---gtg--tta--------------------------------t-agaaa----t
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  11931 17 -     33861 ATG---GTG--TTA--------------------------------G-AGAAAA---T
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            11952 17 -     34016 ATG---GTG--TTA--------------------------------G-AGAAAA---T
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4294347 17 -   5030052 ATG---Gtg--tta--------------------------------g-agaaaa---t
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             11953 17 -     34685 ATG---GTG--TTA--------------------------------G-AGAAAA---T
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               25074 17 -     47192 ATG---GTG--TTA--------------------------------G-AGAAAA---T
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       8525 10 +     20879 ATG---GTA--TAA--------------------------------C-----------
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 1 I 10
s Arctocebus_calabarensis.k141_288239                        16157 17 +     17124 ATG---ATG--TTC--------------------------------T-GCAGAA---G
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Avahi_laniger.k141_765380                                  50557 17 -     92717 gtg---atg--taa--------------------------------t-gaaaaa---c
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              51186 17 +     85213 gtg---atg--taa--------------------------------t-gaaaaa---c
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             1683 17 -     10423 gtg---gtg--tta--------------------------------t-agaaaa---t
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             21175 17 +     31915 gtg---gtg--tta--------------------------------t-agaaaa---t
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            1650 17 +      5267 gtg---gtg--tta--------------------------------t-agaaaa---t
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23586862 17 - 189096842 GTG---GTG--TTA--------------------------------T-AGAAAA---T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              8394 17 -     12001 gtg---gtg--tta--------------------------------t-agaaaa---t
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                            9999749 10 -  17673402 -tg---gta--taa--------------------------------t-a---------
i Camelus_bactrianus.KN276810.1                          C 0 I 8
s Camelus_dromedarius.KN272107.1                           2332213 10 -   7040546 -tg---gta--taa--------------------------------t-a---------
i Camelus_dromedarius.KN272107.1                         C 0 I 8
s Camelus_ferus.KB017975.1                                  400489 10 -   1652518 -tg---gta--taa--------------------------------t-a---------
i Camelus_ferus.KB017975.1                               C 0 I 8
s CanFam4.chr16                                           17796606 11 -  60362399 gca---gtg--taa--------------------------------t-a---------
i CanFam4.chr16                                          I 1 I 6
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182663 11 -    185531 gca---gtg--taa--------------------------------t-a---------
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 1 I 6
s Canis_lupus_dingo.QKWQ01000480.1                         9032049 11 -   9314153 gca---gtg--taa--------------------------------t-a---------
i Canis_lupus_dingo.QKWQ01000480.1                       I 1 I 6
s Canis_lupus_familiaris.chr16                            17956314 11 -  59632846 gca---gtg--taa--------------------------------t-a---------
i Canis_lupus_familiaris.chr16                           I 1 I 6
s Canis_lupus_orion.HG994398.1                            18497614 11 +  63665305 gca---gtg--taa--------------------------------t-a---------
i Canis_lupus_orion.HG994398.1                           I 1 I 6
s Carlito_syrichta.NW_007259797.1                           142289 17 -    496798 atg---ata--taa--------------------------------t-aaaaaa---t
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    134998 11 +    179628 gtg---gta--taa--------------------------------t-a---------
i Castor_canadensis.CasCan_scaffold_2074                 I 1 I 13
s Catagonus_wagneri.CatWag_scaffold_2839                     90117 11 +    217609 GTG---GTA--AGA--------------------------------T-A---------
i Catagonus_wagneri.CatWag_scaffold_2839                 I 1 I 6
s Cebuella_niveiventris.k141_1251222                          6303 17 -     11392 gtg---gtg--tta--------------------------------t-agaaaa---t
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               2401 17 -      7577 gtg---gtg--tta--------------------------------t-agaaaa---t
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         6200 17 -      8605 atg---ata--taa--------------------------------t-aaaaaa---t
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12228726 11 +  27778364 atg---ata--taa--------------------------------t-a---------
i Ceratotherium_simum.JH767749.1                         I 1 I 6
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          3444 11 -      3715 ATG---Ata--taa--------------------------------t-a---------
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     I 1 I 6
s Cercocebus_atys.KQ010504.1                               4471865 17 +   4669795 GTG---GTA--tag--------------------------------c-agaaaa---t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        10413 17 -     19203 atg---gta--tag--------------------------------c-agaaaa---t
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           4835 17 +      8260 atg---gta--tag--------------------------------c-agaaaa---t
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           5062 17 +     27781 atg---gta--tag--------------------------------c-agaaaa---t
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         5217 17 -     20310 ACg---gta--tag--------------------------------t-agaaaa---t
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           8201 17 +     29689 ACg---gta--tag--------------------------------t-agaaaa---t
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            2629 17 +      9989 atg---gta--tag--------------------------------t-agaaaa---t
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          10878 17 -     27936 atg---gta--taa--------------------------------t-agaaaa---t
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                            10908 17 -     11289 atg---gta--tag--------------------------------t-agaaaa---t
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38813283 17 +  39242232 ACg---gta--tag--------------------------------t-agaaaa---t
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21218979 17 -  21565898 atg---gta--tag--------------------------------t-agaaaa---t
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       36098 17 -     53127 atg---gta--tag--------------------------------t-agaaaa---t
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        3384 17 +      7159 ACg---gta--tag--------------------------------t-agaaaa---t
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       10901 17 -     27947 atg---gta--tag--------------------------------t-agaaaa---t
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         10877 17 +     17596 atg---gta--tag--------------------------------t-agaaaa---t
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         41378 17 -     41420 ATG---GTA--TAG--------------------------------T-AGAAAA---T
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            5639  2 -      6351 TT--------------------------------------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       I 1 C 0
s Cheirogaleus_major.k141_333249                             17979 17 -     52598 AGg---atg--taa--------------------------------t-gaaaaa---t
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           13328 17 +     57038 atg---atg--taa--------------------------------t-gaaaaa---t
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           7320 17 +     11226 atg---gtg--tta--------------------------------c-agaaaa---t
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18424839 17 -  18827391 atg---gta--tag--------------------------------t-agaaaa---t
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       11280 17 -     50209 atg---gta--tag--------------------------------t-agaaaa---t
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135418286 17 + 135778131 ATG---GTa--tag--------------------------------t-agaaaa---t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15967  2 +     19366 TT--------------------------------------------------------
i Choloepus_didactylus.ChoDid_scaffold_45914             I 1 C 0
s Choloepus_hoffmanni.KN194906.1                            171066  2 +    839153 TT--------------------------------------------------------
i Choloepus_hoffmanni.KN194906.1                         I 1 C 0
s Colobus_angolensis.KN981557.1                            1906803 17 +   2368649 ATG---GTA--tag--------------------------------t-agaaaa---t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199946472 17 + 200372422 atg---gta--tag--------------------------------t-agaaaa---t
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              33344 17 +     84244 atg---gta--tag--------------------------------t-agaaaa---t
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17547129  3 -  53390261 ACA-------------------------------------------------------
i Condylura_cristata.JH655891.1                          I 1 I 5
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          11376 10 -     20389 --G---gta--taa--------------------------------tga---------
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 6
s Cricetomys_gambianus.CriGam_scaffold_18520                 47177  9 +     63868 gtgtgtgtg-------------------------------------------------
i Cricetomys_gambianus.CriGam_scaffold_18520             I 1 I 20
s Crocidura_indochinensis.CroInd_scaffold_239572              2145 37 -      5012 ATT---CCA--TAACTTGTTAT--CATGTAAGATGA--C-C-ATTTT-A---------
i Crocidura_indochinensis.CroInd_scaffold_239572         I 5 I 29
s Cryptoprocta_ferox.CryFer_flattened_line_16129             25779 11 -     87169 ACA---GTG--taa--------------------------------t-a---------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 1 I 6
s Dasypus_novemcinctus.JH564415.1                            61947  2 +   2246927 TT--------------------------------------------------------
i Dasypus_novemcinctus.JH564415.1                        I 1 C 0
s Daubentonia_madagascariensis.ctg71                      12534156 17 -  12879189 atg---atg--taa--------------------------------c-gaaaaa---c
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  670579 11 +   1390856 atg---ata--taa--------------------------------t-a---------
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 1 I 6
s Diceros_bicornis.DicBicMic_scaffold_5955                    3334 11 +    198055 ATG---ATA--TAA--------------------------------T-A---------
i Diceros_bicornis.DicBicMic_scaffold_5955               I 1 I 6
s Eidolon_helvum.KE759718.1                                   8280 13 +     11740 gta---atatacaa--------------------------------t-a---------
i Eidolon_helvum.KE759718.1                              I 1 I 6
s Enhydra_lutris.KZ291758.1                               16326625 11 -  41312741 GCA---Gtg--taa--------------------------------t-a---------
i Enhydra_lutris.KZ291758.1                              I 1 I 6
s Equus_asinus.JREZ01000139.1                              1280620 11 +   4378816 gtg---ata--taa--------------------------------t-a---------
i Equus_asinus.JREZ01000139.1                            I 1 I 6
s Equus_caballus.CM000403.2                               18528441 11 -  39960074 gtg---ata--taa--------------------------------t-a---------
i Equus_caballus.CM000403.2                              I 1 I 6
s Equus_przewalskii.KK951119.1                               30456 11 +    498745 gtg---ata--taa--------------------------------t-a---------
i Equus_przewalskii.KK951119.1                           I 1 I 6
s Erythrocebus_patas.Contig38                             21201481 17 -  21539334 atg---gta--tag--------------------------------t-agaaaa---t
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              10660 17 -     14127 gtg---atg--taa--------------------------------t-gaaaaa---c
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                3358 17 -     16928 gtg---atg--taa--------------------------------t-gaaaaa---c
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              12391 17 -     25546 gtg---atg--taa--------------------------------t-gaaaaa---c
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             9576 17 +     26330 gtg---atg--taa--------------------------------t-gaaaaa---c
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 10832 17 +     23973 gtg---atg--taa--------------------------------t-gaaaaa---c
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 9576 17 +     75513 gtg---atg--taa--------------------------------t-gaaaaa---c
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  7527 17 +     97555 gtg---atg--taa--------------------------------t-gaaaaa---c
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            10455 17 +     26496 gtg---atg--taa--------------------------------t-gaaaaa---a
i Eulemur_rubriventer.k141_571033                        I 1 C 0
s Eulemur_rufus.k141_1476633                                  1060 17 -     17153 gtg---atg--taa--------------------------------t-gaaaaa---c
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              10635 17 +    111500 gtg---atg--taa--------------------------------t-gaaaaa---c
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20234482 11 + 206538554 gca---gtg--taa--------------------------------t-a---------
i Felis_catus.CM001381.2                                 I 1 I 3
s Felis_catus_fca126.CM031415.1                           20193327 11 + 205367284 gca---gtg--taa--------------------------------t-a---------
i Felis_catus_fca126.CM031415.1                          I 1 I 3
s Felis_nigripes.FelNig_flattened_line_20823                  6839 11 -     36744 GCA---Gtg--taa--------------------------------t-a---------
i Felis_nigripes.FelNig_flattened_line_20823             I 1 I 3
s Galeopterus_variegatus.GalVar_scaffold_266699                880 20 +      2098 atg---gtg--taa--------------------------------t-aaaaaaatat
i Galeopterus_variegatus.GalVar_scaffold_266699          C 0 I 244
s Gorilla_beringei.k141_3596273                              12211 17 -     32273 atg---gta--tag--------------------------------t-agaaaa---t
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186334359 17 + 186649187 atg---gta--tag--------------------------------t-agaaaa---t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   31310 10 +     78134 ATG---GTA--TAA--------------------------------T-----------
i Graphiurus_murinus.GraMur_scaffold_10447               I 1 I 10
s Hapalemur_alaotrensis.k141_170648                           3723 17 -     19426 gtg---atg--taa--------------------------------t-gaaaaa---c
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              8867 17 -     15286 gtg---atg--taa--------------------------------t-gaaaaa---c
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             10505 17 +     18253 gtg---atg--taa--------------------------------t-gaaaaa---c
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         10608 17 -     41752 gtg---atg--taa--------------------------------t-gaaaaa---c
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         10441 17 -     16460 gtg---atg--taa--------------------------------t-gaaaaa---c
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               239605 11 +    327341 GCA---GTG--taa--------------------------------t-a---------
i Helogale_parvula.HelPar_flattened_line_2585            I 1 I 6
s Hoolock_leuconedys.ctg274                                    431054 17 +    630532 atg---gca--tag--------------------------------t-agaaaa---t
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  41767 11 +     55795 ACA---GTG--taa--------------------------------t-a---------
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 1 I 6
s Hylobates_agilis.k141_307679                               13988 17 -     15490 atg---gca--tag--------------------------------t-agaaaa---t
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              55993 17 +     67168 atg---gca--tag--------------------------------t-agaaaa---t
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189539643 17 - 191637585 atg---gca--tag--------------------------------t-agaaaa---t
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3332536 17 -  11177569 atg---gca--tag--------------------------------t-agaaaa---t
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7516572 10 -   7955117 gtg---gtt--ata--------------------------------t-----------
i Ictidomys_tridecemlineatus.JH393364.1                  I 1 I 10
s Indri_indri.k141_3655594                                   19419 17 +     31101 atg---atg--taa--------------------------------t-gaaaaa---c
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8272900  6 -   9596543 gtg---ttg-------------------------------------------------
i Jaculus_jaculus.JH725527.1                             I 6 I 52
s Lemur_catta.scaffold_24                                 15520969 17 -  30322482 gtg---atg--taa--------------------------------t-gaaaaa---c
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        4089 17 +     64341 atg---gtg--tta--------------------------------c-agaaaa---t
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           1149 17 +      4941 atg---gtg--tta--------------------------------c-agaaaa---t
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4017 17 +     35603 atg---gtg--tta--------------------------------c-agaaaa---t
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    25447 17 +     38576 atg---gtg--tta--------------------------------t-agaaaa---t
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         22144 17 +     66356 atg---gtg--tta--------------------------------t-agaaaa---t
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          7878 17 -     23766 atg---ata--taa--------------------------------c-gaaaaa---c
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             25825 17 +     45836 atg---ata--taa--------------------------------t-gaaaaa---c
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_320948                            87 17 -      1719 atg---atg--taa--------------------------------t-gaaaaa---c
i Lepilemur_ruficaudatus.k141_320948                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      23880 17 +     54090 atg---ata--taa--------------------------------t-gaaaaa---c
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3039773  9 +   3914936 GCA---Gtg--taa--------------------------------------------
i Leptonychotes_weddellii.KB714746.1                     I 1 I 7
s Lophocebus_aterrimus.ctg367                              1433411 17 +   1826925 atg---gta--tag--------------------------------c-agaaaa---t
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            2389 17 +     11245 atg---atg--tac--------------------------------t-aaagaa---g
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1001226 17 +   6120653 ATG---ATG--TAC--------------------------------T-AAAGAA---G
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17952554 11 -  59628241 gca---gtg--taa--------------------------------t-a---------
i Lycaon_pictus.CM007581.1                               I 1 I 6
s Macaca_arctoides.k141_2326796                               3232 17 +     40492 atg---gta--tgg--------------------------------t-agaaaa---t
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59672486 17 +  60120075 ATG---GCA--TGG--------------------------------T-AGAAAA---T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  8988 17 -     26193 atg---gta--tgg--------------------------------t-agaaaa---t
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            76784 17 -    114318 atg---gta--tgg--------------------------------t-agaaaa---t
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  2499 17 -     23192 atg---gta--tgg--------------------------------t-agaaaa---t
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                11951 17 -     29190 atg---gta--tgg--------------------------------t-agaaaa---t
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  20519 17 +     37952 atg---gta--tgg--------------------------------t-agaaaa---t
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186835607 17 + 187317192 ATG---GTA--tgg--------------------------------t-agaaaa---t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25454170 17 -  25927173 ATG---GTA--tgg--------------------------------t-agaaaa---t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  76368 17 +     89720 atg---gta--tgg--------------------------------t-agaaaa---t
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 3365 17 +     20474 atg---gta--tgg--------------------------------t-agaaaa---t
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   3167 17 -     14993 atg---gta--tgg--------------------------------t-agaaaa---t
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  326038 17 -    668171 atg---gta--tgg--------------------------------t-agaaaa---t
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 1469 17 -     24072 atg---gta--tgg--------------------------------t-agaaaa---t
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               22106 17 -     45290 atg---gta--tgg--------------------------------t-agaaaa---t
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88369 13 +     94391 GTG---GTATATAA--------------------------------T-A---------
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 1 I 6
s Mandrillus_leucophaeus.scaffold280                      23933654 17 -  24302211 atg---gta--tag--------------------------------c-agaaaa---t
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               347830 17 +    752769 atg---gta--tag--------------------------------c-agaaaa---t
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              16782 11 +    737560 gtg---gta--taa--------------------------------t-a---------
i Manis_javanica.JSZB01003497.1                          I 1 I 5
s Manis_pentadactyla.KN006162.1                              48167 11 -    317179 gtg---gta--taa--------------------------------t-a---------
i Manis_pentadactyla.KN006162.1                          I 1 I 5
s Marmota_marmota.CZRN01000018.1                          33098884 10 -  40650429 gtg---gtt--ata--------------------------------t-----------
i Marmota_marmota.CZRN01000018.1                         I 1 I 10
s Mellivora_capensis.MelCap_flattened_line_69365              7332 11 +     13704 GCA---Gtg--taa--------------------------------t-a---------
i Mellivora_capensis.MelCap_flattened_line_69365         I 1 I 6
s Mico_argentatus.k141_1239457                                2229 17 -      7380 gtg---gtg--tta--------------------------------t-agaaaa---t
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               1299 17 +     18990 gtg---gtg--tta--------------------------------t-agaaaa---t
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      2234 17 -      7356 gtg---gtg--tta--------------------------------t-agaaaa---t
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18288352 17 -  93316391 ACG---ATG--TAA--------------------------------T-GAAAAA---C
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_534055                           5407 17 -     28506 atg---gta--tag--------------------------------t-agaaaa---t
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         2609 11 -      8324 GCA---Gtg--taa--------------------------------t-a---------
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 1 I 6
s Mirza_zaza.k141_952172                                      5922 17 -     37649 ACg---atg--taa--------------------------------t-gaaaaa---c
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138686 11 -    366855 gtg---aca--caa--------------------------------t-a---------
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 1 I 6
s Mungos_mungo.MunMun_flattened_line_23663                   32712 11 +     37127 ACG---Gtg--taa--------------------------------t-a---------
i Mungos_mungo.MunMun_flattened_line_23663               I 1 I 6
s Mus_caroli.LT608237.1                                   84358186  7 - 120012414 gtgtgtg---------------------------------------------------
i Mus_caroli.LT608237.1                                  I 1 I 7
s Mus_musculus.chr8                                       87647168  9 - 129401213 gtgtgtgtg-------------------------------------------------
i Mus_musculus.chr8                                      I 1 I 11
s Mus_pahari.LT608297.1                                   31351423  9 -  89631738 gtgtgtgtg-------------------------------------------------
i Mus_pahari.LT608297.1                                  I 1 I 11
s Mus_spretus.CM004101.1                                  90749235  9 - 130317789 gtgtgtgtg-------------------------------------------------
i Mus_spretus.CM004101.1                                 I 1 I 23
s Muscardinus_avellanarius.MusAve_scaffold_82313              3634 10 +     14296 ATG---GTA--TAa--------------------------------t-----------
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 1 I 10
s Mustela_putorius.JH418006.1                               298515 11 -  14710649 GCA---Gtg--taa--------------------------------t-a---------
i Mustela_putorius.JH418006.1                            I 1 I 6
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186888  2 +    196477 TT--------------------------------------------------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 1 C 0
s Nasalis_larvatus.k141_413338                               11404 17 +     21681 gtg---gta--tag--------------------------------t-agaaaa---t
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    757219 11 +    783361 gtg---ata--taa--------------------------------t-a---------
i Noctilio_leporinus.NocLep_scaffold_251                 I 1 I 8
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146815 11 -   9404916 gca---gtg--taa--------------------------------t-a---------
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 1 I 6
s Nycticebus_bengalensis.LG01                            102576209 17 - 196305487 ATG---ATG--TAC--------------------------------T-GAAGAA---G
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             3895 17 +      8486 atg---atg--tac--------------------------------t-gaagaa---g
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105746636 17 + 199412804 ATG---ATG--TAC--------------------------------T-GAAGAA---G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                              503915 11 -   2017862 gca---gtg--taa--------------------------------t-a---------
i Odobenus_rosmarus.KB229312.1                           I 1 I 6
s Otocyon_megalotis.JAEUCK010005147.1                       459569 11 -    559221 gca---gtg--taa--------------------------------t-a---------
i Otocyon_megalotis.JAEUCK010005147.1                    I 1 I 6
s Pan_paniscus.KQ411613.1                                    40328 17 +     80009 ATG---GTA--tag--------------------------------t-agaaaa---t
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03001836.1                             26252 17 +     51860 ATG---GTA--tag--------------------------------t-agaaaa---t
i Pan_troglodytes.NBAG03001836.1                         C 0 I 183
s Panthera_onca.PanOnc_flattened_line_3271                  148488 11 +    230217 gca---gtg--taa--------------------------------t-a---------
i Panthera_onca.PanOnc_flattened_line_3271               I 1 I 6
s Panthera_pardus.KV860321.1                                261695 11 +  18783137 gca---gtg--taa--------------------------------t-a---------
i Panthera_pardus.KV860321.1                             I 1 I 6
s Panthera_tigris.KE722367.1                               4718332 11 -   8748460 GCA---Gtg--taa--------------------------------t-a---------
i Panthera_tigris.KE722367.1                             I 1 I 6
s Papio_anubis.CM001495.2                                183439440 17 + 183742232 ATG---GTA--tag--------------------------------c-agaaaa---t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             3133 17 +     20448 atg---gta--tag--------------------------------c-agaaaa---t
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20559938 17 +  20919399 atg---gta--tag--------------------------------c-agaaaa---t
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   1876 17 +     41871 atg---gta--tag--------------------------------c-agaaaa---t
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     5162 17 +     27711 atg---gta--tag--------------------------------c-agaaaa---t
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  5242 17 +      9205 atg---gta--tag--------------------------------c-agaaaa---t
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9950 11 -     78924 ACA---GTG--taa--------------------------------t-a---------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 1 I 6
s Perodicticus_ibeanus.k141_855320                            6390 17 +     13100 ATG---ATG--TTC--------------------------------T-GCAGAA---G
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             4763 17 +     25941 ATG---ATG--TTC--------------------------------T-GCAGAA---G
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Piliocolobus_badius.k141_1234363                           39916 17 +     62158 atg---gta--tag--------------------------------t-agaaaa---t
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        34638 17 +     89929 atg---gta--tag--------------------------------t-agaaaa---t
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            36054 17 +     51399 atg---gta--tag--------------------------------t-agaaaa---t
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14292292 17 -  14605196 ATG---GTA--tag--------------------------------t-agaaaa---t
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189127369 17 + 189387572 ATG---GCA--tag--------------------------------t-agaaaa---t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9566977 17 +   9816681 atg---gca--tag--------------------------------t-agaaaa---t
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               69566 17 -     81375 gtg---gta--tag--------------------------------t-agaaaa---t
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              1386 17 +     19060 gtg---gta--tag--------------------------------t-agaaaa---t
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2593621 17 -   4620579 GTG---ATG--TAA--------------------------------T-GAAAAA---C
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     987617 17 +   2598838 GTG---ATG--TAA--------------------------------T-GAAAAA---C
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          25921 17 +     38485 gtg---atg--taa--------------------------------t-gaaaaa---c
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             2080 17 +      4256 gcg---atg--taa--------------------------------t-gaaaaa---c
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          23440 17 +     35766 gcg---atg--taa--------------------------------t-gaaaaa---c
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           1622 17 -     24134 gtg---atg--taa--------------------------------t-gaaaaa---c
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        25435 17 -     67325 gtg---atg--taa--------------------------------t-gaaaaa---c
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           1680 17 -      6182 gtg---atg--taa--------------------------------t-gaaaaa---c
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            12075 12 -     21811 gtg---ata--caa-------------------------------ct-a---------
i Pteronotus_parnellii.KE909381.1                        I 1 I 6
s Pteronura_brasiliensis.PteBra_flattened_line_31117         37532 11 +     42204 gca---gtg--taa--------------------------------t-a---------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 1 I 6
s Pteropus_alecto.KB030862.1                              22974550 13 +  28871421 gta---gtatataa--------------------------------t-a---------
i Pteropus_alecto.KB030862.1                             I 1 I 6
s Pteropus_vampyrus.KN525825.1                             1357640 13 +   4952924 GTG---gtatgtaa--------------------------------t-a---------
i Pteropus_vampyrus.KN525825.1                           I 1 I 6
s Puma_concolor.QAVW01001104.1                            20271614 11 -  38429054 GCA---Gtg--taa--------------------------------t-a---------
i Puma_concolor.QAVW01001104.1                           I 1 I 3
s Pygathrix_cinerea.k141_1153803                             11397 17 -     91421 gtg---gta--tag--------------------------------t-agaaaa---t
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7605525 17 +   7812017 gtg---gta--tag--------------------------------t-agaaaa---t
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11373 17 -     72585 gtg---gta--tag--------------------------------t-agaaaa---t
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53567263  9 +  90668790 gtgtgtctg-------------------------------------------------
i Rattus_norvegicus.chr16                                I 1 I 11
s Rhinopithecus_bieti.k119_217274                             3081 17 -     11128 gtg---gta--tag--------------------------------t-agaaaa---t
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91232436 17 - 195417433 GTG---GTA--tag--------------------------------t-agaaaa---t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7668085 17 +   7961872 gtg---gca--tag--------------------------------t-agaaaa---t
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85551 13 -     96226 GTG---ATATATAA--------------------------------T-T---------
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 1 I 5
s Saguinus_bicolor.k141_2619299                               4345 17 -      8359 atg---gtg--tta--------------------------------c-agaaaa---t
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            10654 17 -     13588 atg---gtg--tta--------------------------------c-agaaaa---t
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              4290 17 -      6207 atg---gtg--tta--------------------------------c-agaaaa---t
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               10017 17 +     13640 atg---gtg--tta--------------------------------c-agaaaa---t
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               4880 17 +      8564 atg---gtg--tta--------------------------------c-ggaaaa---t
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209465158 17 + 209938924 atg---gtg--tta--------------------------------c-agaaaa---t
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 4370 17 -      9399 atg---gtg--tta--------------------------------c-agaaaa---t
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 1519 17 +      3421 atg---gtg--tta--------------------------------c-agaaaa---t
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119947718 17 - 121099817 ATG---GTG--Tta--------------------------------c-agaaaa---t
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       20185 17 +     46362 atg---gtg--tta--------------------------------c-agaaaa---t
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               20280 17 +     45824 atg---gtg--tta--------------------------------c-agaaaa---t
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             36895 17 -     64574 ATG---GTG--TTA--------------------------------C-AGAAAA---T
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_1888710                              19116 17 -     19356 ATG---GTG--TTA--------------------------------C-AGAAAA---T
i Saimiri_sciureus.k141_1888710                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 20173 17 -     61129 atg---gtg--tta--------------------------------c-agaaaa---t
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    152180  3 -    313613 ACA-------------------------------------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 1 I 10
s Semnopithecus_entellus.k141_11662                          15909 17 -     19888 gtg---gta--tag--------------------------------t-agaaaa---t
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      23111 17 +     39453 gtg---gta--tag--------------------------------t-agaaaa---t
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            3637 17 +     27826 gtg---gta--tag--------------------------------t-agaaaa---t
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             3158 17 -     19483 gtg---gta--tag--------------------------------t-agaaaa---t
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      3220 17 +      7198 gtg---gta--tag--------------------------------t-agaaaa---t
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         11480 17 +     15514 gtg---gta--tag--------------------------------t-agaaaa---t
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            188508 36 -    191337 ATT---ATA--TAA--A-TTATTTTAT---CG-TGGTACACTATTAT-G---------
i Solenodon_paradoxus.SolPar_flattened_line_5840         I 1 I 6
s Spermophilus_dauricus.KZ294078.1                         1949658 10 -   3870691 gtg---gtt--ata--------------------------------t-----------
i Spermophilus_dauricus.KZ294078.1                       I 1 I 8
s Spilogale_gracilis.SpiGra_flattened_line_13525             28048 11 +     97271 GCA---GTG--taa--------------------------------t-a---------
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 1 I 6
s Suricata_suricatta.SurSur_flattened_line_6629              15618 11 -    196729 ACA---GTG--taa--------------------------------t-a---------
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 I 6
s Sus_scrofa.JH118708.1                                      32600 11 -     47482 gtg---gta--aga--------------------------------t-a---------
i Sus_scrofa.JH118708.1                                  I 1 I 6
s Symphalangus_syndactylus.tarseq_199                      1089685 17 -   1523678 atg---gca--tag--------------------------------t-agaaaa---t
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 7653 11 +     41958 ATG---GTA--TAA--------------------------------T-A---------
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 1 I 6
s Tamandua_tetradactyla.TamTet_scaffold_1782                 70242  2 +    116680 TT--------------------------------------------------------
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 1 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      116061 11 -    156842 ata---ata--taa--------------------------------t-a---------
i Tapirus_indicus.TapInd_scaffold_9301                   I 1 I 6
s Tapirus_terrestris.TapTer_scaffold_755                    384512 11 +    539355 atg---ata--taa--------------------------------t-a---------
i Tapirus_terrestris.TapTer_scaffold_755                 I 1 I 5
s Tarsius_lariang.k141_2201908                               11927 17 +     70052 atg---ata--taa--------------------------------t-aaaaaa---t
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               16232 17 +     25099 atg---ata--taa--------------------------------t-aaaaaa---t
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186424806 17 + 186847797 ATG---GTA--tag--------------------------------c-agaaaa---t
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   2807  2 +      8208 TT--------------------------------------------------------
i Tolypeutes_matacus.TolMat_scaffold_228639              I 1 C 0
s Trachypithecus_auratus.k141_722599                          7211 17 -     20410 gtg---gta--tag--------------------------------t-agaaaa---t
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    11406 17 +     15221 gtg---gta--tag--------------------------------t-agaaaa---t
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        7312 17 +     19930 gtg---gta--tag--------------------------------t-agaaaa---t
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       3742 17 -     19997 gtg---gta--tag--------------------------------t-agaaaa---t
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            43861 17 -     60166 gtg---gta--tag--------------------------------t-agaaaa---t
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        11332 17 -     27529 gtg---gta--tag--------------------------------t-agaaaa---t
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     11274 17 -     18194 gtg---gta--tag--------------------------------t-agaaaa---t
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           5009 17 -     21137 gtg---gta--tag--------------------------------t-agaaaa---t
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    3712 17 -     10723 gtg---gta--tag--------------------------------t-agaaaa---t
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         2864 17 +      9834 gtg---gta--tag--------------------------------t-agaaaa---t
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        21183 17 +     32220 gtg---gta--tag--------------------------------t-agaaaa---t
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5935279 17 +   6242583 gtg---gta--tag--------------------------------t-agaaaa---t
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        4526 17 +     20839 gtg---gta--tag--------------------------------t-agaaaa---t
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2151826 11 +   4065304 atg---gta--taa--------------------------------t-g---------
i Tupaia_chinensis.KB320699.1                            I 1 I 6
s Tupaia_tana.TupTan_flattened_line_97126                     5133 11 -     10553 atg---gta--taa--------------------------------t-g---------
i Tupaia_tana.TupTan_flattened_line_97126                I 1 I 6
s Uropsilus_gracilis.UroGra_scaffold_12083                   52380  3 -     77625 ACT-------------------------------------------------------
i Uropsilus_gracilis.UroGra_scaffold_12083               I 1 I 9
s Ursus_maritimus.KK499267.1                               4847777 11 -   5085361 ACA---GGg--taa--------------------------------t-a---------
i Ursus_maritimus.KK499267.1                             I 1 I 6
s Varecia_rubra.k141_590885                                   8300 17 +     50397 gtg---atg--taa--------------------------------t-gaaaaa---c
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              8355 17 +     24756 gtg---atg--taa--------------------------------t-gaaaaa---c
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5369239 10 -   5488506 -tg---gta--taa--------------------------------t-a---------
i Vicugna_pacos.KN270157.1                               C 0 I 6
s Vulpes_lagopus.VulLag_flattened_line_30954                  8229 11 -     43706 gca---gtg--taa--------------------------------t-a---------
i Vulpes_lagopus.VulLag_flattened_line_30954             I 1 I 6
s Xerus_inauris.XerIna_scaffold_48378                        21032 10 -     24430 ATG---GCT--GTA--------------------------------T-----------
i Xerus_inauris.XerIna_scaffold_48378                    I 1 I 10
s Zalophus_californianus.ZalCal_flattened_line_17732          2485 11 +     86975 GCA---GTG--taa--------------------------------t-a---------
i Zalophus_californianus.ZalCal_flattened_line_17732     I 1 I 6
s Zapus_hudsonius.ZapHud_scaffold_11398                      11914  6 +     63895 GTG---TTG-------------------------------------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 6 I 10
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519  0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188  0 +      1777 C
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    10415 29 -     12148 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Psammomys_obesus.NESX01036370.1                             6735 11 -     21651 I
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18190973 11 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    76414 11 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   20908 79 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1359220  0 +   3988456 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11256822 67 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12179627  3 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 29084 11 +    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                         7659  5 -    207569 I
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_29171               40558  6 +     43066 I
e Hipposideros_armiger.JXIK01000431.1                       109122  6 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Galagoides_demidoff.k141_31856                              3354  0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Ellobius_talpinus.LOJH01109367.1                            2762 29 -      6299 I
e Ellobius_lutescens.LOEQ01008920.1                          16711 27 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11664308 436 + 224834208 I
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       2993 2 +     62944 at
s Acinonyx_jubatus.LLWD01001279.1                           824631 2 -   1699592 gt
i Acinonyx_jubatus.LLWD01001279.1                        I 3 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     67524 2 +     87051 gt
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 11 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507878 2 -  29979442 at
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 6 C 0
s Ailurus_fulgens.LNAC01001112.1                             76662 2 -    347723 at
i Ailurus_fulgens.LNAC01001112.1                         I 7 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     66591 2 -     89534 CT
i Allactaga_bullata.AllBul_scaffold_9566                 I 27 C 0
s Allenopithecus_nigroviridis.k141_3361533                   10923 2 -     52922 at
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         10857 2 -     28001 at
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          1303 2 -     18505 at
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           2152 2 -     12518 at
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_2038611                             23331 2 +     24414 ac
i Alouatta_belzebul.k141_2038611                         C 0 C 0
s Alouatta_caraya.k141_885645                                54092 2 +     54689 ac
i Alouatta_caraya.k141_885645                            C 0 C 0
s Alouatta_discolor.k141_2852575                            124681 2 +    125349 ac
i Alouatta_discolor.k141_2852575                         C 0 C 0
s Alouatta_juara.k141_1509701                                21026 2 +     25266 ac
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                            468 2 +      2906 ac
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            14581 2 -     18578 ac
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_668256                              17285 2 +     18088 ac
i Alouatta_palliata.k141_668256                          C 0 C 0
s Alouatta_puruensis.k141_1766044                            18336 2 -     18677 ac
i Alouatta_puruensis.k141_1766044                        C 0 C 0
s Alouatta_seniculus.k141_117119                             11318 2 +     50774 ac
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  11948 2 -     33861 ac
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            11969 2 -     34016 at
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4294364 2 -   5030052 at
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             11970 2 -     34685 ac
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               25091 2 -     47192 ac
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       8545 2 +     20879 at
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 10 C 0
s Arctocebus_calabarensis.k141_288239                        16174 2 +     17124 Gt
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Avahi_laniger.k141_765380                                  50574 2 -     92717 ag
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              51203 2 +     85213 ag
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             1700 2 -     10423 ac
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             21192 2 +     31915 ac
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            1667 2 +      5267 ac
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23586879 2 - 189096842 AC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              8411 2 -     12001 ac
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s CanFam4.chr16                                           17796623 2 -  60362399 gt
i CanFam4.chr16                                          I 6 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182680 2 -    185531 gt
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 6 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9032066 2 -   9314153 gt
i Canis_lupus_dingo.QKWQ01000480.1                       I 6 C 0
s Canis_lupus_familiaris.chr16                            17956331 2 -  59632846 gt
i Canis_lupus_familiaris.chr16                           I 6 C 0
s Canis_lupus_orion.HG994398.1                            18497631 2 +  63665305 gt
i Canis_lupus_orion.HG994398.1                           I 6 C 0
s Carlito_syrichta.NW_007259797.1                           142306 2 -    496798 at
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     90134 2 +    217609 AT
i Catagonus_wagneri.CatWag_scaffold_2839                 I 6 C 0
s Cebuella_niveiventris.k141_1251222                          6320 2 -     11392 ac
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               2418 2 -      7577 ac
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         6217 2 -      8605 at
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12228743 2 +  27778364 at
i Ceratotherium_simum.JH767749.1                         I 6 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          3461 2 -      3715 at
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     I 6 C 0
s Cercocebus_atys.KQ010504.1                               4471882 2 +   4669795 at
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        10430 2 -     19203 at
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           4852 2 +      8260 at
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           5079 2 +     27781 ag
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         5234 2 -     20310 at
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           8218 2 +     29689 at
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            2646 2 +      9989 at
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          10895 2 -     27936 at
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                            10925 2 -     11289 at
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38813300 2 +  39242232 at
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21218996 2 -  21565898 at
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       36115 2 -     53127 at
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        3401 2 +      7159 at
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       10918 2 -     27947 at
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         10894 2 +     17596 at
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         41395 2 -     41420 AT
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Cheirogaleus_major.k141_333249                             17996 2 -     52598 ag
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           13345 2 +     57038 ag
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           7337 2 +     11226 ac
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18424856 2 -  18827391 at
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       11297 2 -     50209 at
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135418303 2 + 135778131 at
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1906820 2 +   2368649 at
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199946489 2 + 200372422 at
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              33361 2 +     84244 at
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          11392 2 -     20389 at
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 6 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 47206 2 +     63868 gt
i Cricetomys_gambianus.CriGam_scaffold_18520             I 20 C 0
s Crocidura_indochinensis.CroInd_scaffold_419916               467 2 +      2842 AT
i Crocidura_indochinensis.CroInd_scaffold_419916         I 289 n 29
s Cryptoprocta_ferox.CryFer_flattened_line_16129             25796 2 -     87169 at
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 6 C 0
s Daubentonia_madagascariensis.ctg71                      12534173 2 -  12879189 at
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  670596 2 +   1390856 at
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 6 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    3351 2 +    198055 at
i Diceros_bicornis.DicBicMic_scaffold_5955               I 6 C 0
s Eidolon_helvum.KE759718.1                                   8299 2 +     11740 tt
i Eidolon_helvum.KE759718.1                              I 6 C 0
s Ellobius_lutescens.LOEQ01008920.1                          16738 2 -    110024 gt
i Ellobius_lutescens.LOEQ01008920.1                      I 27 C 0
s Ellobius_talpinus.LOJH01109367.1                            2791 2 -      6299 gt
i Ellobius_talpinus.LOJH01109367.1                       I 29 C 0
s Enhydra_lutris.KZ291758.1                               16326642 2 -  41312741 at
i Enhydra_lutris.KZ291758.1                              I 6 C 0
s Equus_asinus.JREZ01000139.1                              1280637 2 +   4378816 at
i Equus_asinus.JREZ01000139.1                            I 6 C 0
s Equus_caballus.CM000403.2                               18528458 2 -  39960074 at
i Equus_caballus.CM000403.2                              I 6 C 0
s Equus_przewalskii.KK951119.1                               30473 2 +    498745 at
i Equus_przewalskii.KK951119.1                           I 6 C 0
s Erythrocebus_patas.Contig38                             21201498 2 -  21539334 at
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              10677 2 -     14127 ag
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                3375 2 -     16928 ag
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              12408 2 -     25546 ag
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             9593 2 +     26330 ag
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 10849 2 +     23973 ag
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 9593 2 +     75513 ag
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  7544 2 +     97555 ag
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            10472 2 +     26496 ag
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  1077 2 -     17153 ag
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              10652 2 +    111500 ag
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20234496 2 + 206538554 gt
i Felis_catus.CM001381.2                                 I 3 C 0
s Felis_catus_fca126.CM031415.1                           20193341 2 + 205367284 gt
i Felis_catus_fca126.CM031415.1                          I 3 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  6853 2 -     36744 gt
i Felis_nigripes.FelNig_flattened_line_20823             I 3 C 0
s Galeopterus_variegatus.GalVar_scaffold_266699               1144 2 +      2098 at
i Galeopterus_variegatus.GalVar_scaffold_266699          I 244 C 0
s Gorilla_beringei.k141_3596273                              12228 2 -     32273 at
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186334376 2 + 186649187 at
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   31330 2 +     78134 at
i Graphiurus_murinus.GraMur_scaffold_10447               I 10 C 0
s Hapalemur_alaotrensis.k141_170648                           3740 2 -     19426 ag
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              8884 2 -     15286 ag
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             10522 2 +     18253 ag
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         10625 2 -     41752 ag
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         10458 2 -     16460 ag
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               239622 2 +    327341 at
i Helogale_parvula.HelPar_flattened_line_2585            I 6 C 0
s Hipposideros_armiger.JXIK01000431.1                       109128 2 +   1711038 at
i Hipposideros_armiger.JXIK01000431.1                    I 6 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               40564 2 +     43066 gt
i Hipposideros_galeritus.HipGal_scaffold_29171           I 6 C 0
s Hoolock_leuconedys.ctg274                                    431071 2 +    630532 at
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  41784 2 +     55795 at
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 6 C 0
s Hylobates_agilis.k141_307679                               14005 2 -     15490 at
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              56010 2 +     67168 at
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189539660 2 - 191637585 at
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3332553 2 -  11177569 at
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7516592 2 -   7955117 tt
i Ictidomys_tridecemlineatus.JH393364.1                  I 10 C 0
s Indri_indri.k141_3655594                                   19436 2 +     31101 ag
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8272958 2 -   9596543 gt
i Jaculus_jaculus.JH725527.1                             I 52 C 0
s Lemur_catta.scaffold_24                                 15520986 2 -  30322482 ag
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        4106 2 +     64341 ac
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           1166 2 +      4941 ac
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4034 2 +     35603 ac
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    25464 2 +     38576 ac
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         22161 2 +     66356 ac
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          7895 2 -     23766 ag
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             25842 2 +     45836 ag
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_320948                           104 2 -      1719 ag
i Lepilemur_ruficaudatus.k141_320948                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      23897 2 +     54090 ag
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3039789 2 +   3914936 at
i Leptonychotes_weddellii.KB714746.1                     I 7 C 0
s Lophocebus_aterrimus.ctg367                              1433428 2 +   1826925 at
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            2406 2 +     11245 gt
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1001243 2 +   6120653 Gt
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17952571 2 -  59628241 gt
i Lycaon_pictus.CM007581.1                               I 6 C 0
s Macaca_arctoides.k141_2326796                               3249 2 +     40492 at
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59672503 2 +  60120075 at
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  9005 2 -     26193 at
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            76801 2 -    114318 at
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  2516 2 -     23192 at
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                11968 2 -     29190 at
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  20536 2 +     37952 at
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186835624 2 + 187317192 at
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25454187 2 -  25927173 at
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  76385 2 +     89720 at
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 3382 2 +     20474 at
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   3184 2 -     14993 at
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  326055 2 -    668171 at
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 1486 2 -     24072 at
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               22123 2 -     45290 at
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88388 2 +     94391 GT
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 6 C 0
s Mandrillus_leucophaeus.scaffold280                      23933671 2 -  24302211 at
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               347847 2 +    752769 at
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              16798 2 +    737560 at
i Manis_javanica.JSZB01003497.1                          I 5 C 0
s Manis_pentadactyla.KN006162.1                              48183 2 -    317179 at
i Manis_pentadactyla.KN006162.1                          I 5 C 0
s Marmota_marmota.CZRN01000018.1                          33098904 2 -  40650429 tt
i Marmota_marmota.CZRN01000018.1                         I 10 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         7664 2 -    207569 at
i Megaderma_lyra.MegLyr_scaffold_4542                    I 5 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              7349 2 +     13704 at
i Mellivora_capensis.MelCap_flattened_line_69365         I 6 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 29095 2 +    140813 GT
i Meriones_unguiculatus.MerUng_scaffold_7390             I 11 C 0
s Mesocricetus_auratus.KB708134.1                         12179630 2 -  29670104 GT
i Mesocricetus_auratus.KB708134.1                        I 3 C 0
s Mico_argentatus.k141_1239457                                2246 2 -      7380 ac
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               1316 2 +     18990 ac
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      2251 2 -      7356 ac
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18288369 2 -  93316391 AG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11256889 2 -  27267610 gt
i Microtus_ochrogaster.CM001695.1                        I 67 C 0
s Miopithecus_ogouensis.k141_534055                           5424 2 -     28506 at
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         2626 2 -      8324 at
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 6 C 0
s Mirza_zaza.k141_952172                                      5939 2 -     37649 ag
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138703 2 -    366855 at
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 6 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   32729 2 +     37127 at
i Mungos_mungo.MunMun_flattened_line_23663               I 6 C 0
s Mus_caroli.LT608237.1                                   84358200 2 - 120012414 gt
i Mus_caroli.LT608237.1                                  I 7 C 0
s Mus_musculus.chr8                                       87647188 2 - 129401213 gt
i Mus_musculus.chr8                                      I 11 C 0
s Mus_pahari.LT608297.1                                   31351443 2 -  89631738 gt
i Mus_pahari.LT608297.1                                  I 11 I 26
s Mus_spretus.CM004101.1                                  90749267 2 - 130317789 at
i Mus_spretus.CM004101.1                                 I 23 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              3654 2 +     14296 tt
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 10 C 0
s Mustela_putorius.JH418006.1                               298532 2 -  14710649 at
i Mustela_putorius.JH418006.1                            I 6 C 0
s Nasalis_larvatus.k141_413338                               11421 2 +     21681 at
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    757238 2 +    783361 ac
i Noctilio_leporinus.NocLep_scaffold_251                 I 8 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146832 2 -   9404916 gt
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 6 C 0
s Nycticebus_bengalensis.LG01                            102576226 2 - 196305487 Gt
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             3912 2 +      8486 gt
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105746653 2 + 199412804 Gt
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                              503932 2 -   2017862 at
i Odobenus_rosmarus.KB229312.1                           I 6 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   20987 2 +     28053 gt
i Ondatra_zibethicus.OndZib_scaffold_46174               I 79 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    76425 2 +    102263 GT
i Onychomys_torridus.OnyTor_scaffold_2986                I 11 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       459586 2 -    559221 gt
i Otocyon_megalotis.JAEUCK010005147.1                    I 6 C 0
s Pan_paniscus.KQ411613.1                                    40345 2 +     80009 at
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189139237 2 + 189151597 at
i Pan_troglodytes.CM009242.2                             I 27 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  148505 2 +    230217 gt
i Panthera_onca.PanOnc_flattened_line_3271               I 6 C 0
s Panthera_pardus.KV860321.1                                261712 2 +  18783137 gt
i Panthera_pardus.KV860321.1                             I 6 C 0
s Panthera_tigris.KE722367.1                               4718349 2 -   8748460 gt
i Panthera_tigris.KE722367.1                             I 6 C 0
s Papio_anubis.CM001495.2                                183439457 2 + 183742232 at
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             3150 2 +     20448 at
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20559955 2 +  20919399 at
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   1893 2 +     41871 at
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     5179 2 +     27711 at
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  5259 2 +      9205 at
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9967 2 -     78924 at
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 6 C 0
s Perodicticus_ibeanus.k141_855320                            6407 2 +     13100 Gt
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             4780 2 +     25941 Gt
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18190984 2 -  18517816 gt
i Peromyscus_maniculatus.KI615324.1                      I 11 C 0
s Piliocolobus_badius.k141_1234363                           39933 2 +     62158 at
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        34655 2 +     89929 at
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            36071 2 +     51399 at
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14292309 2 -  14605196 at
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189127386 2 + 189387572 at
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9566994 2 +   9816681 at
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               69583 2 -     81375 at
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              1403 2 +     19060 at
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2593638 2 -   4620579 AG
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     987634 2 +   2598838 AG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          25938 2 +     38485 ag
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             2097 2 +      4256 ag
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          23457 2 +     35766 ag
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           1639 2 -     24134 ag
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        25452 2 -     67325 ag
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           1697 2 -      6182 ag
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             6746 2 -     21651 gt
i Psammomys_obesus.NESX01036370.1                        I 11 C 0
s Pteronotus_parnellii.KE909381.1                            12093 2 -     21811 at
i Pteronotus_parnellii.KE909381.1                        I 6 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         37549 2 +     42204 at
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 6 C 0
s Pteropus_alecto.KB030862.1                              22974569 2 +  28871421 gt
i Pteropus_alecto.KB030862.1                             I 6 C 0
s Pteropus_vampyrus.KN525825.1                             1357659 2 +   4952924 gt
i Pteropus_vampyrus.KN525825.1                           I 6 C 0
s Puma_concolor.QAVW01001104.1                            20271628 2 -  38429054 gt
i Puma_concolor.QAVW01001104.1                           I 3 C 0
s Pygathrix_cinerea.k141_1153803                             11414 2 -     91421 at
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7605542 2 +   7812017 at
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11390 2 -     72585 at
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53567283 2 +  90668790 gt
i Rattus_norvegicus.chr16                                I 11 C 0
s Rhinopithecus_bieti.k119_217274                             3098 2 -     11128 at
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91232453 2 - 195417433 at
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7668102 2 +   7961872 at
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85569 2 -     96226 GT
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 5 C 0
s Saguinus_bicolor.k141_2619299                               4362 2 -      8359 ac
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            10671 2 -     13588 ac
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              4307 2 -      6207 ac
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               10034 2 +     13640 ac
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               4897 2 +      8564 ac
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209465175 2 + 209938924 ac
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 4387 2 -      9399 ac
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 1536 2 +      3421 ac
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119947735 2 - 121099817 gc
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       20202 2 +     46362 gc
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               20297 2 +     45824 gc
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             36912 2 -     64574 GC
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_1888710                              19133 2 -     19356 GC
i Saimiri_sciureus.k141_1888710                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 20190 2 -     61129 gc
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          15926 2 -     19888 at
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      23128 2 +     39453 at
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            3654 2 +     27826 at
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             3175 2 -     19483 at
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      3237 2 +      7198 at
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         11497 2 +     15514 at
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    10444 2 -     12148 GT
i Sigmodon_hispidus.SigHis_scaffold_60841                I 29 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            188550 2 -    191337 ac
i Solenodon_paradoxus.SolPar_flattened_line_5840         I 6 C 0
s Spermophilus_dauricus.KZ294078.1                         1949676 2 -   3870691 tt
i Spermophilus_dauricus.KZ294078.1                       I 8 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             28065 2 +     97271 at
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 6 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              15635 2 -    196729 ac
i Suricata_suricatta.SurSur_flattened_line_6629          I 6 C 0
s Sus_scrofa.JH118708.1                                      32617 2 -     47482 gc
i Sus_scrofa.JH118708.1                                  I 6 C 0
s Symphalangus_syndactylus.tarseq_199                      1089702 2 -   1523678 at
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 7670 2 +     41958 at
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 6 I 360
s Tapirus_indicus.TapInd_scaffold_9301                      116078 2 -    156842 at
i Tapirus_indicus.TapInd_scaffold_9301                   I 6 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    384528 2 +    539355 ac
i Tapirus_terrestris.TapTer_scaffold_755                 I 5 C 0
s Tarsius_lariang.k141_2201908                               11944 2 +     70052 at
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               16249 2 +     25099 at
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186424823 2 + 186847797 at
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          7228 2 -     20410 at
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    11423 2 +     15221 at
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        7329 2 +     19930 at
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       3759 2 -     19997 at
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            43878 2 -     60166 at
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        11349 2 -     27529 at
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     11291 2 -     18194 at
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           5026 2 -     21137 at
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    3729 2 -     10723 at
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         2881 2 +      9834 at
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        21200 2 +     32220 at
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5935296 2 +   6242583 at
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        4543 2 +     20839 at
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2151843 2 +   4065304 at
i Tupaia_chinensis.KB320699.1                            I 6 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     5150 2 -     10553 at
i Tupaia_tana.TupTan_flattened_line_97126                I 6 C 0
s Ursus_maritimus.KK499267.1                               4847794 2 -   5085361 at
i Ursus_maritimus.KK499267.1                             I 6 C 0
s Varecia_rubra.k141_590885                                   8317 2 +     50397 ag
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              8372 2 +     24756 ag
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5369255 2 -   5488506 at
i Vicugna_pacos.KN270157.1                               I 6 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  8246 2 -     43706 at
i Vulpes_lagopus.VulLag_flattened_line_30954             I 6 C 0
s Xerus_inauris.XerIna_scaffold_48378                        21052 2 -     24430 at
i Xerus_inauris.XerIna_scaffold_48378                    I 10 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          2502 2 +     86975 at
i Zalophus_californianus.ZalCal_flattened_line_17732     I 6 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      11930 2 +     63895 GG
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 10 C 0
e Sapajus_macrocephalus.k141_351809                          54316 0 -     80660 C
e Sapajus_apella.ctg103                                    5419275 0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519 0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188 0 +      1777 C
e Cebus_albifrons.Contig27                                25650611 0 +  26074798 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906 0 -     10935 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383 9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553 7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   2809 0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937 0 +    114563 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 70244 0 +    116680 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10240 0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823 1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813 0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1359220 0 +   3988456 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805 0 +       996 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186890 0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33016 1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456 1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390 1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692 1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520 1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686 0 +   8254450 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009 7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Loxodonta_africana.GL010049.1                            4214777 0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547 0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491 0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Galagoides_demidoff.k141_31856                              3354 0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447 1 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1089268 0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084 0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495 7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            61949 0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11664308 436 + 224834208 I
e Condylura_cristata.JH655891.1                           17547132 5 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            171068 0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15969 0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498 0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            5641 0 -      6351 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157 0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    135009 13 +    179628 I
e Carollia_perspicillata.CarPer_scaffold_92756                3465 7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Camelus_ferus.KB017975.1                                  400499 8 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2332223 8 -   7040546 I
e Camelus_bactrianus.KN276810.1                            9999759 8 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102 7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691 7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       2995 1 +     62944 a
s Acinonyx_jubatus.LLWD01001279.1                           824633 1 -   1699592 a
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     67526 1 +     87051 g
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507880 1 -  29979442 a
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             76664 1 -    347723 a
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     66593 1 -     89534 G
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   10925 1 -     52922 a
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         10859 1 -     28001 a
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          1305 1 -     18505 a
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           2154 1 -     12518 a
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_2038611                             23333 1 +     24414 a
i Alouatta_belzebul.k141_2038611                         C 0 C 0
s Alouatta_caraya.k141_885645                                54094 1 +     54689 a
i Alouatta_caraya.k141_885645                            C 0 C 0
s Alouatta_discolor.k141_2852575                            124683 1 +    125349 a
i Alouatta_discolor.k141_2852575                         C 0 C 0
s Alouatta_juara.k141_1509701                                21028 1 +     25266 a
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                            470 1 +      2906 a
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            14583 1 -     18578 a
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_668256                              17287 1 +     18088 a
i Alouatta_palliata.k141_668256                          C 0 C 0
s Alouatta_puruensis.k141_1766044                            18338 1 -     18677 a
i Alouatta_puruensis.k141_1766044                        C 0 C 0
s Alouatta_seniculus.k141_117119                             11320 1 +     50774 a
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  11950 1 -     33861 a
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            11971 1 -     34016 a
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4294366 1 -   5030052 a
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             11972 1 -     34685 a
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               25093 1 -     47192 a
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       8547 1 +     20879 a
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        16176 1 +     17124 a
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Avahi_laniger.k141_765380                                  50576 1 -     92717 a
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              51205 1 +     85213 a
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             1702 1 -     10423 a
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             21194 1 +     31915 a
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            1669 1 +      5267 a
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23586881 1 - 189096842 A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              8413 1 -     12001 a
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s CanFam4.chr16                                           17796625 1 -  60362399 a
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182682 1 -    185531 a
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9032068 1 -   9314153 a
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17956333 1 -  59632846 a
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18497633 1 +  63665305 a
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           142308 1 -    496798 a
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     90136 1 +    217609 T
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          6322 1 -     11392 a
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               2420 1 -      7577 a
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         6219 1 -      8605 a
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12228745 1 +  27778364 a
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          3463 1 -      3715 a
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4471884 1 +   4669795 a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        10432 1 -     19203 a
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           4854 1 +      8260 a
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           5081 1 +     27781 a
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         5236 1 -     20310 a
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           8220 1 +     29689 a
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            2648 1 +      9989 a
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          10897 1 -     27936 a
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                            10927 1 -     11289 a
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38813302 1 +  39242232 a
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21218998 1 -  21565898 a
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       36117 1 -     53127 a
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        3403 1 +      7159 a
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       10920 1 -     27947 a
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         10896 1 +     17596 a
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         41397 1 -     41420 A
i Cercopithecus_roloway.k141_3180641                     C 0 C 0
s Cheirogaleus_major.k141_333249                             17998 1 -     52598 a
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           13347 1 +     57038 a
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           7339 1 +     11226 a
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18424858 1 -  18827391 a
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       11299 1 -     50209 a
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135418305 1 + 135778131 a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1906822 1 +   2368649 a
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199946491 1 + 200372422 a
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              33363 1 +     84244 a
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          11394 1 -     20389 a
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 47208 1 +     63868 g
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_287352              1345 1 +      4208 A
i Crocidura_indochinensis.CroInd_scaffold_287352         I 55 I 74
s Cryptoprocta_ferox.CryFer_flattened_line_16129             25798 1 -     87169 a
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12534175 1 -  12879189 a
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  670598 1 +   1390856 a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    3353 1 +    198055 a
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE759718.1                                   8301 1 +     11740 a
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          16740 1 -    110024 a
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01109367.1                            2793 1 -      6299 g
i Ellobius_talpinus.LOJH01109367.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16326644 1 -  41312741 a
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1280639 1 +   4378816 a
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18528460 1 -  39960074 a
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               30475 1 +    498745 a
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21201500 1 -  21539334 a
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              10679 1 -     14127 a
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                3377 1 -     16928 a
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              12410 1 -     25546 a
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             9595 1 +     26330 a
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 10851 1 +     23973 a
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 9595 1 +     75513 a
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  7546 1 +     97555 a
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            10474 1 +     26496 a
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  1079 1 -     17153 a
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              10654 1 +    111500 a
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20234498 1 + 206538554 a
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20193343 1 + 205367284 a
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  6855 1 -     36744 a
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_266699               1146 1 +      2098 a
i Galeopterus_variegatus.GalVar_scaffold_266699          C 0 I 2
s Gorilla_beringei.k141_3596273                              12230 1 -     32273 a
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186334378 1 + 186649187 a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   31332 1 +     78134 a
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 124
s Hapalemur_alaotrensis.k141_170648                           3742 1 -     19426 a
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              8886 1 -     15286 a
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             10524 1 +     18253 a
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         10627 1 -     41752 a
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         10460 1 -     16460 a
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               239624 1 +    327341 a
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       109130 1 +   1711038 a
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               40566 1 +     43066 a
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    431073 1 +    630532 a
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  41786 1 +     55795 a
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_307679                               14007 1 -     15490 a
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              56012 1 +     67168 a
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189539662 1 - 191637585 a
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3332555 1 -  11177569 a
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_3655594                                   19438 1 +     31101 a
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8272960 1 -   9596543 g
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lemur_catta.scaffold_24                                 15520988 1 -  30322482 a
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        4108 1 +     64341 a
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           1168 1 +      4941 a
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4036 1 +     35603 a
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    25466 1 +     38576 a
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         22163 1 +     66356 a
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          7897 1 -     23766 a
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             25844 1 +     45836 a
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_320948                           106 1 -      1719 a
i Lepilemur_ruficaudatus.k141_320948                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      23899 1 +     54090 a
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3039791 1 +   3914936 t
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                              1433430 1 +   1826925 a
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            2408 1 +     11245 a
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1001245 1 +   6120653 a
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17952573 1 -  59628241 a
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               3251 1 +     40492 a
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59672505 1 +  60120075 a
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  9007 1 -     26193 a
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            76803 1 -    114318 a
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  2518 1 -     23192 a
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                11970 1 -     29190 a
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  20538 1 +     37952 a
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186835626 1 + 187317192 a
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25454189 1 -  25927173 a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  76387 1 +     89720 a
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 3384 1 +     20474 a
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   3186 1 -     14993 a
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  326057 1 -    668171 a
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 1488 1 -     24072 a
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               22125 1 -     45290 a
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88390 1 +     94391 A
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23933673 1 -  24302211 a
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               347849 1 +    752769 a
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              16800 1 +    737560 a
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              48185 1 -    317179 a
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         7666 1 -    207569 a
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              7351 1 +     13704 g
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 29097 1 +    140813 G
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12179632 1 -  29670104 T
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                2248 1 -      7380 a
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               1318 1 +     18990 a
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      2253 1 -      7356 a
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18288371 1 -  93316391 A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11256891 1 -  27267610 a
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miopithecus_ogouensis.k141_534055                           5426 1 -     28506 a
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         2628 1 -      8324 t
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      5941 1 -     37649 a
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138705 1 -    366855 a
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   32731 1 +     37127 a
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Mus_caroli.LT608237.1                                   84358202 1 - 120012414 g
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87647190 1 - 129401213 g
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31351471 1 -  89631738 g
i Mus_pahari.LT608297.1                                  I 26 C 0
s Mus_spretus.CM004101.1                                  90749269 1 - 130317789 g
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              3656 1 +     14296 a
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               298534 1 -  14710649 a
i Mustela_putorius.JH418006.1                            C 0 C 0
s Nasalis_larvatus.k141_413338                               11423 1 +     21681 a
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    757240 1 +    783361 a
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146834 1 -   9404916 a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102576228 1 - 196305487 a
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             3914 1 +      8486 a
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105746655 1 + 199412804 a
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                              503934 1 -   2017862 a
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   20989 1 +     28053 g
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    76427 1 +    102263 G
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       459588 1 -    559221 a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Pan_paniscus.KQ411613.1                                    40347 1 +     80009 a
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189139239 1 + 189151597 a
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  148507 1 +    230217 a
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                261714 1 +  18783137 a
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4718351 1 -   8748460 a
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183439459 1 + 183742232 a
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             3152 1 +     20448 a
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20559957 1 +  20919399 a
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   1895 1 +     41871 a
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     5181 1 +     27711 a
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  5261 1 +      9205 a
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9969 1 -     78924 a
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            6409 1 +     13100 a
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             4782 1 +     25941 a
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18190986 1 -  18517816 g
i Peromyscus_maniculatus.KI615324.1                      C 0 I 40
s Piliocolobus_badius.k141_1234363                           39935 1 +     62158 a
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        34657 1 +     89929 a
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            36073 1 +     51399 a
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14292311 1 -  14605196 a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189127388 1 + 189387572 a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9566996 1 +   9816681 a
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               69585 1 -     81375 a
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              1405 1 +     19060 a
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2593640 1 -   4620579 A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     987636 1 +   2598838 A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          25940 1 +     38485 a
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             2099 1 +      4256 a
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          23459 1 +     35766 a
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           1641 1 -     24134 a
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        25454 1 -     67325 a
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           1699 1 -      6182 a
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             6748 1 -     21651 g
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            12095 1 -     21811 a
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         37551 1 +     42204 a
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22974571 1 +  28871421 a
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1357661 1 +   4952924 a
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20271630 1 -  38429054 a
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             11416 1 -     91421 a
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7605544 1 +   7812017 a
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11392 1 -     72585 a
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53567285 1 +  90668790 g
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             3100 1 -     11128 a
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91232455 1 - 195417433 a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7668104 1 +   7961872 a
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85571 1 -     96226 A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               4364 1 -      8359 a
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            10673 1 -     13588 a
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              4309 1 -      6207 a
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               10036 1 +     13640 a
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               4899 1 +      8564 a
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209465177 1 + 209938924 a
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 4389 1 -      9399 a
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 1538 1 +      3421 a
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119947737 1 - 121099817 a
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       20204 1 +     46362 a
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               20299 1 +     45824 a
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             36914 1 -     64574 a
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_1888710                              19135 1 -     19356 a
i Saimiri_sciureus.k141_1888710                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 20192 1 -     61129 a
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          15928 1 -     19888 a
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      23130 1 +     39453 a
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            3656 1 +     27826 a
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             3177 1 -     19483 a
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      3239 1 +      7198 a
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         11499 1 +     15514 a
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    10446 1 -     12148 G
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            188552 1 -    191337 a
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             28067 1 +     97271 a
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              15637 1 -    196729 a
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.JH118708.1                                      32619 1 -     47482 a
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1089704 1 -   1523678 a
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 8032 1 +     41958 a
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 360 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      116080 1 -    156842 a
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    384530 1 +    539355 a
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               11946 1 +     70052 a
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               16251 1 +     25099 a
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186424825 1 + 186847797 a
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          7230 1 -     20410 a
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    11425 1 +     15221 a
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        7331 1 +     19930 a
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       3761 1 -     19997 a
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            43880 1 -     60166 a
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        11351 1 -     27529 a
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     11293 1 -     18194 a
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           5028 1 -     21137 a
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    3731 1 -     10723 a
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         2883 1 +      9834 a
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        21202 1 +     32220 a
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5935298 1 +   6242583 a
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        4545 1 +     20839 a
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2151845 1 +   4065304 g
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     5152 1 -     10553 g
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4847796 1 -   5085361 a
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   8319 1 +     50397 a
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              8374 1 +     24756 a
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5369257 1 -   5488506 a
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  8248 1 -     43706 a
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          2504 1 +     86975 a
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      11932 1 +     63895 G
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Sapajus_macrocephalus.k141_351809                          54316 0 -     80660 C
e Sapajus_apella.ctg103                                    5419275 0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519 0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188 0 +      1777 C
e Cebus_albifrons.Contig27                                25650611 0 +  26074798 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906 0 -     10935 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Xerus_inauris.XerIna_scaffold_48378                        21054 0 -     24430 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383 9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553 7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   2809 0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937 0 +    114563 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 70244 0 +    116680 C
e Spermophilus_dauricus.KZ294078.1                         1949678 0 -   3870691 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10240 0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823 1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813 0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1359220 0 +   3988456 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805 0 +       996 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186890 0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33016 1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456 1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390 1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692 1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520 1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686 0 +   8254450 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009 7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Marmota_marmota.CZRN01000018.1                          33098906 0 -  40650429 C
e Loxodonta_africana.GL010049.1                            4214777 0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Ictidomys_tridecemlineatus.JH393364.1                    7516594 0 -   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547 0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491 0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Galagoides_demidoff.k141_31856                              3354 0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447 1 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1089268 0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084 0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495 7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            61949 0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11664308 436 + 224834208 I
e Condylura_cristata.JH655891.1                           17547132 5 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            171068 0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15969 0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498 0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            5641 0 -      6351 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157 0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    135009 13 +    179628 I
e Carollia_perspicillata.CarPer_scaffold_92756                3465 7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Camelus_ferus.KB017975.1                                  400499 8 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2332223 8 -   7040546 I
e Camelus_bactrianus.KN276810.1                            9999759 8 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102 7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691 7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       2996 2 +     62944 tt
s Acinonyx_jubatus.LLWD01001279.1                           824634 2 -   1699592 tt
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     67527 2 +     87051 ct
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 22
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507881 2 -  29979442 tt
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             76665 2 -    347723 tt
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     66594 2 -     89534 TT
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 1
s Allenopithecus_nigroviridis.k141_3361533                   10926 2 -     52922 tt
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         10860 2 -     28001 tt
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          1306 2 -     18505 tt
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           2155 2 -     12518 tt
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_2038611                             23334 2 +     24414 tt
i Alouatta_belzebul.k141_2038611                         C 0 C 0
s Alouatta_caraya.k141_885645                                54095 2 +     54689 tt
i Alouatta_caraya.k141_885645                            C 0 C 0
s Alouatta_discolor.k141_2852575                            124684 2 +    125349 tt
i Alouatta_discolor.k141_2852575                         C 0 C 0
s Alouatta_juara.k141_1509701                                21029 2 +     25266 tt
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                            471 2 +      2906 tt
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            14584 2 -     18578 tt
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_668256                              17288 2 +     18088 tt
i Alouatta_palliata.k141_668256                          C 0 C 0
s Alouatta_puruensis.k141_1766044                            18339 2 -     18677 tt
i Alouatta_puruensis.k141_1766044                        C 0 C 0
s Alouatta_seniculus.k141_117119                             11321 2 +     50774 tt
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  11951 2 -     33861 tt
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            11972 2 -     34016 tt
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4294367 2 -   5030052 tt
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             11973 2 -     34685 tt
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               25094 2 -     47192 tt
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       8548 2 +     20879 ct
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        16177 2 +     17124 tt
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Avahi_laniger.k141_765380                                  50577 2 -     92717 tt
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              51206 2 +     85213 tt
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             1703 2 -     10423 tt
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             21195 2 +     31915 tt
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            1670 2 +      5267 tt
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23586882 2 - 189096842 TT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              8414 2 -     12001 tt
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s CanFam4.chr16                                           17796626 2 -  60362399 tt
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182683 2 -    185531 tt
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9032069 2 -   9314153 tt
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17956334 2 -  59632846 tt
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18497634 2 +  63665305 tt
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           142309 2 -    496798 tt
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     90137 2 +    217609 CT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          6323 2 -     11392 tt
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               2421 2 -      7577 tt
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         6220 2 -      8605 tt
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12228746 2 +  27778364 tt
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          3464 2 -      3715 tt
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4471885 2 +   4669795 tt
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        10433 2 -     19203 tt
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           4855 2 +      8260 tt
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           5082 2 +     27781 tt
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         5237 2 -     20310 tt
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           8221 2 +     29689 tt
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            2649 2 +      9989 tt
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          10898 2 -     27936 tt
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                            10928 2 -     11289 tt
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38813303 2 +  39242232 tt
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21218999 2 -  21565898 tt
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       36118 2 -     53127 tt
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        3404 2 +      7159 tt
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       10921 2 -     27947 tt
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         10897 2 +     17596 tt
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_3180641                         41398 2 -     41420 TT
i Cercopithecus_roloway.k141_3180641                     C 0 N 0
s Cheirogaleus_major.k141_333249                             17999 2 -     52598 tt
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           13348 2 +     57038 tt
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           7340 2 +     11226 tt
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18424859 2 -  18827391 tt
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       11300 2 -     50209 tt
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135418306 2 + 135778131 tt
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1906823 2 +   2368649 tt
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199946492 2 + 200372422 tt
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              33364 2 +     84244 tt
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          11395 1 -     20389 t-
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 29
s Cricetomys_gambianus.CriGam_scaffold_18520                 47209 2 +     63868 tT
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 22
s Crocidura_indochinensis.CroInd_scaffold_807070               858 2 +      1402 TT
i Crocidura_indochinensis.CroInd_scaffold_807070         I 283 I 225
s Cryptoprocta_ferox.CryFer_flattened_line_16129             25799 2 -     87169 ct
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12534176 2 -  12879189 at
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  670599 2 +   1390856 tt
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    3354 2 +    198055 tt
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE759718.1                                   8302 2 +     11740 tt
i Eidolon_helvum.KE759718.1                              C 0 I 1
s Ellobius_lutescens.LOEQ01008920.1                          16741 2 -    110024 tt
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01109367.1                            2794 2 -      6299 tt
i Ellobius_talpinus.LOJH01109367.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16326645 2 -  41312741 tt
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1280640 2 +   4378816 tt
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18528461 2 -  39960074 tt
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               30476 2 +    498745 tt
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21201501 2 -  21539334 tt
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              10680 2 -     14127 tt
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                3378 2 -     16928 tt
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              12411 2 -     25546 tt
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             9596 2 +     26330 tt
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 10852 2 +     23973 tt
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 9596 2 +     75513 tt
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  7547 2 +     97555 tt
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            10475 2 +     26496 tt
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  1080 2 -     17153 tt
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              10655 2 +    111500 tt
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20234499 2 + 206538554 tt
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20193344 2 + 205367284 ct
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  6856 2 -     36744 tt
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_197845                903 2 -      3123 tt
i Galeopterus_variegatus.GalVar_scaffold_197845          I 296 I 88
s Gorilla_beringei.k141_3596273                              12231 2 -     32273 tt
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186334379 2 + 186649187 tt
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           3743 2 -     19426 tt
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              8887 2 -     15286 tt
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             10525 2 +     18253 tt
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         10628 2 -     41752 tt
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         10461 2 -     16460 tt
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               239625 2 +    327341 cc
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       109131 2 +   1711038 tt
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 1
s Hipposideros_galeritus.HipGal_scaffold_29171               40567 2 +     43066 tt
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 I 1
s Hoolock_leuconedys.ctg274                                    431074 2 +    630532 tt
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  41787 2 +     55795 ct
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 14
s Hylobates_agilis.k141_307679                               14008 2 -     15490 tt
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              56013 2 +     67168 ta
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189539663 2 - 191637585 tt
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3332556 2 -  11177569 tt
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_3655594                                   19439 2 +     31101 tt
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8272961 2 -   9596543 tt
i Jaculus_jaculus.JH725527.1                             C 0 I 1
s Lemur_catta.scaffold_24                                 15520989 2 -  30322482 tt
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        4109 2 +     64341 tt
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           1169 2 +      4941 tt
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4037 2 +     35603 tt
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    25467 2 +     38576 tt
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         22164 2 +     66356 tt
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          7898 2 -     23766 tt
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             25845 2 +     45836 tt
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_320948                           107 2 -      1719 tt
i Lepilemur_ruficaudatus.k141_320948                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      23900 2 +     54090 tt
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3039792 2 +   3914936 tt
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                              1433431 2 +   1826925 tt
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            2409 2 +     11245 tt
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1001246 2 +   6120653 tt
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17952574 2 -  59628241 tt
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               3252 2 +     40492 tt
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59672506 2 +  60120075 tt
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  9008 2 -     26193 tt
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            76804 2 -    114318 tt
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  2519 2 -     23192 tt
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                11971 2 -     29190 tt
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  20539 2 +     37952 tt
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186835627 2 + 187317192 tt
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25454190 2 -  25927173 tt
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  76388 2 +     89720 tt
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 3385 2 +     20474 tt
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   3187 2 -     14993 tt
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  326058 2 -    668171 tt
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 1489 2 -     24072 tt
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               22126 2 -     45290 tt
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88391 2 +     94391 tt
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 1
s Mandrillus_leucophaeus.scaffold280                      23933674 2 -  24302211 tt
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               347850 2 +    752769 tt
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              16801 2 +    737560 tt
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              48186 2 -    317179 tt
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         7667 2 -    207569 tt
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 35
s Mellivora_capensis.MelCap_flattened_line_69365              7352 2 +     13704 tt
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 29098 2 +    140813 tt
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 22
s Mesocricetus_auratus.KB708134.1                         12179633 2 -  29670104 tt
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                2249 2 -      7380 tt
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               1319 2 +     18990 tt
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      2254 2 -      7356 tt
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18288372 2 -  93316391 TT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11256892 2 -  27267610 tt
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miopithecus_ogouensis.k141_534055                           5427 2 -     28506 tt
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         2629 2 -      8324 tt
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      5942 2 -     37649 tt
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138706 2 -    366855 tt
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   32732 2 +     37127 ct
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Mus_caroli.LT608237.1                                   84358203 2 - 120012414 tt
i Mus_caroli.LT608237.1                                  C 0 I 22
s Mus_musculus.chr8                                       87647191 2 - 129401213 tt
i Mus_musculus.chr8                                      C 0 I 22
s Mus_pahari.LT608297.1                                   31351472 2 -  89631738 tt
i Mus_pahari.LT608297.1                                  C 0 I 22
s Mus_spretus.CM004101.1                                  90749270 2 - 130317789 tt
i Mus_spretus.CM004101.1                                 C 0 I 22
s Muscardinus_avellanarius.MusAve_scaffold_82313              3657 2 +     14296 tt
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 50
s Mustela_putorius.JH418006.1                               298535 2 -  14710649 tt
i Mustela_putorius.JH418006.1                            C 0 C 0
s Nasalis_larvatus.k141_413338                               11424 2 +     21681 tt
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    757241 2 +    783361 tt
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146835 2 -   9404916 tt
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102576229 2 - 196305487 tt
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             3915 2 +      8486 tt
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105746656 2 + 199412804 tt
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                              503935 2 -   2017862 tt
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   20990 2 +     28053 tt
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    76428 2 +    102263 tt
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       459589 2 -    559221 tt
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Pan_paniscus.KQ411613.1                                    40348 2 +     80009 tt
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189139240 2 + 189151597 tt
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  148508 2 +    230217 tt
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                261715 2 +  18783137 tt
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4718352 2 -   8748460 tt
i Panthera_tigris.KE722367.1                             C 0 I 10
s Papio_anubis.CM001495.2                                183439460 2 + 183742232 tt
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             3153 2 +     20448 tt
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20559958 2 +  20919399 tt
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   1896 2 +     41871 tt
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     5182 2 +     27711 tt
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  5262 2 +      9205 tt
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9970 2 -     78924 tt
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            6410 2 +     13100 tt
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             4783 2 +     25941 tt
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18191027 2 -  18517816 tt
i Peromyscus_maniculatus.KI615324.1                      I 40 C 0
s Piliocolobus_badius.k141_1234363                           39936 2 +     62158 tt
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        34658 2 +     89929 tt
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            36074 2 +     51399 tt
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14292312 2 -  14605196 tt
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189127389 2 + 189387572 tt
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9566997 2 +   9816681 tt
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               69586 2 -     81375 tt
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              1406 2 +     19060 tt
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2593641 2 -   4620579 TT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     987637 2 +   2598838 TT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          25941 2 +     38485 tt
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             2100 2 +      4256 tt
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          23460 2 +     35766 tt
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           1642 2 -     24134 tt
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        25455 2 -     67325 tt
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           1700 2 -      6182 tt
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             6749 2 -     21651 tt
i Psammomys_obesus.NESX01036370.1                        C 0 I 22
s Pteronotus_parnellii.KE909381.1                            12096 2 -     21811 tt
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         37552 2 +     42204 tt
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22974572 2 +  28871421 tt
i Pteropus_alecto.KB030862.1                             C 0 I 1
s Pteropus_vampyrus.KN525825.1                             1357662 2 +   4952924 tt
i Pteropus_vampyrus.KN525825.1                           C 0 I 1
s Puma_concolor.QAVW01001104.1                            20271631 2 -  38429054 tt
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             11417 2 -     91421 tt
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7605545 2 +   7812017 tt
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11393 2 -     72585 tt
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53567286 2 +  90668790 tt
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             3101 2 -     11128 tt
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91232456 2 - 195417433 tt
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7668105 2 +   7961872 tt
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85572 2 -     96226 TT
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 1
s Saguinus_bicolor.k141_2619299                               4365 2 -      8359 tt
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            10674 2 -     13588 tt
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              4310 2 -      6207 tt
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               10037 2 +     13640 tt
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               4900 2 +      8564 tt
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209465178 2 + 209938924 tt
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 4390 2 -      9399 tt
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 1539 2 +      3421 tt
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119947738 2 - 121099817 tt
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       20205 2 +     46362 tt
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               20300 2 +     45824 tt
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             36915 2 -     64574 tt
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_1888710                              19136 2 -     19356 tt
i Saimiri_sciureus.k141_1888710                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 20193 2 -     61129 tt
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          15929 2 -     19888 tt
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      23131 2 +     39453 tt
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            3657 2 +     27826 tt
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             3178 2 -     19483 tt
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      3240 2 +      7198 tt
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         11500 2 +     15514 tt
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    10447 2 -     12148 TT
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            188553 2 -    191337 gt
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             28068 2 +     97271 tt
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              15638 2 -    196729 ct
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 13
s Sus_scrofa.JH118708.1                                      32620 2 -     47482 ct
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1089705 2 -   1523678 tt
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 8033 2 +     41958 tt
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      116081 2 -    156842 tt
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    384531 2 +    539355 tt
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               11947 2 +     70052 tt
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               16252 2 +     25099 tt
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186424826 2 + 186847797 tt
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          7231 2 -     20410 tt
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    11426 2 +     15221 tt
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        7332 2 +     19930 tt
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       3762 2 -     19997 tt
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            43881 2 -     60166 tt
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        11352 2 -     27529 tt
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     11294 2 -     18194 tt
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           5029 2 -     21137 tt
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    3732 2 -     10723 tt
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         2884 2 +      9834 tt
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        21203 2 +     32220 tt
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5935299 2 +   6242583 tt
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        4546 2 +     20839 tt
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2151846 2 +   4065304 tt
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     5153 2 -     10553 tt
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4847797 2 -   5085361 tt
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   8320 2 +     50397 tt
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              8375 2 +     24756 tt
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5369258 2 -   5488506 tt
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  8249 2 -     43706 tt
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          2505 2 +     86975 tt
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      11933 2 +     63895 GG
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 1
e Sapajus_macrocephalus.k141_351809                          54316 0 -     80660 C
e Sapajus_apella.ctg103                                    5419275 0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519 0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188 0 +      1777 C
e Cebus_albifrons.Contig27                                25650611 0 +  26074798 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906 0 -     10935 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Xerus_inauris.XerIna_scaffold_48378                        21054 0 -     24430 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383 9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553 7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   2809 0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937 0 +    114563 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 70244 0 +    116680 C
e Spermophilus_dauricus.KZ294078.1                         1949678 0 -   3870691 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10240 0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823 1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813 0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1359220 0 +   3988456 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805 0 +       996 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186890 0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33016 1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456 1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390 1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692 1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520 1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686 0 +   8254450 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009 7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Marmota_marmota.CZRN01000018.1                          33098906 0 -  40650429 C
e Loxodonta_africana.GL010049.1                            4214777 0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Ictidomys_tridecemlineatus.JH393364.1                    7516594 0 -   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547 0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491 0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   31333 124 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Galagoides_demidoff.k141_31856                              3354 0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447 1 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1089268 0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084 0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495 7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            61949 0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11664308 436 + 224834208 I
e Condylura_cristata.JH655891.1                           17547132 5 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            171068 0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15969 0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498 0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            5641 0 -      6351 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157 0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    135009 13 +    179628 I
e Carollia_perspicillata.CarPer_scaffold_92756                3465 7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Camelus_ferus.KB017975.1                                  400499 8 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2332223 8 -   7040546 I
e Camelus_bactrianus.KN276810.1                            9999759 8 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102 7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691 7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       2998 38 +     62944 t--g-atca--tt--gaca----c--tggttcctggcat-a--gagttc-------ct-------------aaa
s Acinonyx_jubatus.LLWD01001279.1                           824636 41 -   1699592 tggg-atttt-t-t----ttt--cc-tagttcatagcac-a--gagctc--------c-------t-----aca
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     67551 17 +     87051 --------------------------------------------------------gcaca-aggttccttaaa
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 22 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507883 38 -  29979442 tggg-ctttt-t------t----cc-tagttcattgcac-a--gagctc--------c-------t-----aaa
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             76667 37 -    347723 tggg-ctttt-t------t----cc-tagttcacagcac-a--gagctc--------c-------t-----aa-
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   10928 38 -     52922 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         10862 38 -     28001 t--g-atca--tt--gaca----t--gggttcctggcat-a--gagctc-------ct-------------aaa
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          1308 38 -     18505 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           2157 38 -     12518 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_2038611                             23336 38 +     24414 t--g-atca--ct--gaca----c--tggttcctggcat-a--gagctc-------tt-------------gaa
i Alouatta_belzebul.k141_2038611                         C 0 C 0
s Alouatta_caraya.k141_885645                                54097 38 +     54689 t--g-atca--ct--gaca----c--tgggtcctggcat-a--gagctc-------ct-------------gaa
i Alouatta_caraya.k141_885645                            C 0 C 0
s Alouatta_discolor.k141_2852575                            124686 38 +    125349 t--g-atca--ct--gaca----c--tggttcctggcat-a--gagctc-------tt-------------gaa
i Alouatta_discolor.k141_2852575                         C 0 C 0
s Alouatta_juara.k141_1509701                                21031 38 +     25266 t--g-atca--ct--gaca----c--tggttcctggcat-a--gagctc-------ct-------------gaa
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                            473 38 +      2906 t--g-atca--ct--gaca----c--tggttcctggcat-a--gagctc-------ct-------------gaa
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            14586 38 -     18578 t--g-atca--ct--gaca----c--tggttcctggcat-a--gagctc-------ct-------------gaa
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_668256                              17290 38 +     18088 t--g-atca--ct--gaca----c--tggttcctggcat-a--gagctc-------ct-------------gaa
i Alouatta_palliata.k141_668256                          C 0 C 0
s Alouatta_puruensis.k141_1766044                            18341 38 -     18677 t--g-atca--ct--gaca----c--tggttcctggcat-a--gagctc-------ct-------------gaa
i Alouatta_puruensis.k141_1766044                        C 0 C 0
s Alouatta_seniculus.k141_117119                             11323 38 +     50774 t--g-atca--ct--gaca----c--tggttcctggcat-a--gagctc-------ct-------------gaa
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  11953 38 -     33861 t--g-gtcg--ct--gaca----c--tggttcccggcat-a--cagctc-------cc-------------gaa
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            11974 38 -     34016 t--g-gtcg--ct--gaca----c--tggttcccggcat-a--cagctc-------cc-------------gaa
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4294369 38 -   5030052 t--g-gtcG--CT--GACA----C--TGGTTCCCAGCAT-A--CAGCTC-------CC-------------GAA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             11975 38 -     34685 t--g-gtcg--ct--gaca----c--tggttcccggcat-a--cagctc-------cc-------------gaa
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               25096 38 -     47192 t--g-gtcg--ct--gaca----c--tggttcccggcat-a--cagctc-------cc-------------gaa
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       8550 20 +     20879 t--a-gtcc--tt--gaca----t--t--tttctt---------------------------------------
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 6
s Arctocebus_calabarensis.k141_288239                        16179 42 +     17124 t--c-gtct--ta--gaca----t--tagctcctgg---Na--gaga-ctttctttct-------------aaa
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Avahi_laniger.k141_765380                                  50579 38 -     92717 t--g-gtct--tt--gaca----g--tggttcctggcac-a--gagctc-------ct-------------aaa
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              51208 38 +     85213 t--g-gtct--tt--gaca----g--tggttcctggcac-a--gagctc-------ct-------------aaa
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             1705 38 -     10423 t--g-gtcg--ct--gaca----c--tggttcctggcgt-a--gagctc-------tg-------------gaa
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             21197 38 +     31915 t--g-gtcg--ct--gaca----c--tggttcctggcat-a--gagctc-------ct-------------gaa
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            1672 38 +      5267 t--g-gtca--ct--gaca----c--tggttcctggcgt-a--gagctc-------cg-------------gaa
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23586884 38 - 189096842 T--G-GTCA--CT--GACA----C--TGGTTCCTGGCGT-A--GAGCTC-------CG-------------Gaa
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              8416 38 -     12001 t--g-gtca--ct--gaca----c--tggttcctggcgt-a--gagctc-------cg-------------gaa
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                            9999767 33 -  17673402 ---g-cttt--c------t----ccccagttcttggcac-a----actc--------c-------t-----aaa
i Camelus_bactrianus.KN276810.1                          I 8 C 0
s Camelus_dromedarius.KN272107.1                           2332231 33 -   7040546 ---g-cttt--c------t----ccccagttcttggcac-a----actc--------c-------t-----aaa
i Camelus_dromedarius.KN272107.1                         I 8 C 0
s Camelus_ferus.KB017975.1                                  400507 33 -   1652518 ---g-cttt--c------t----ccccagttcttggcac-a----actc--------c-------t-----aaa
i Camelus_ferus.KB017975.1                               I 8 C 0
s CanFam4.chr16                                           17796628 38 -  60362399 tgtg-cttt-ct------t----cc-tagttcatagcac-a--gagctc--------c-------t-----aaa
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182685 38 -    185531 tgtg-cttt-ct------t----cc-tagttcatagcac-a--gagctc--------c-------t-----aaa
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9032071 38 -   9314153 tgtg-cttt-ct------t----cc-tagttcatagcac-a--gagctc--------c-------t-----aaa
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17956336 38 -  59632846 tgtg-cttt-ct------t----cc-tagttcatagcac-a--gagctc--------c-------t-----aaa
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18497636 38 +  63665305 tgtg-cttt-ct------t----cc-tagttcatagcac-a--gagctc--------c-------t-----aaa
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           142311 38 -    496798 t--g-gtca--TT--GATA----C--TGATTGCTGGCAT-A--GAGCTC-------CT-------------AAG
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    135022 22 +    179628 t--a-gtct--tt--gact----c--tggttcctt---------------------------------------
i Castor_canadensis.CasCan_scaffold_2074                 I 13 I 16
s Catagonus_wagneri.CatWag_scaffold_2839                     90139 32 +    217609 TGGG-CTTT--T------T----C-CCAGTTCTTGGCAT-A--GAGTTG-------------------------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 1
s Cebuella_niveiventris.k141_1251222                          6325 38 -     11392 t--g-gtcg--ct--gaca----c--tggttcctggcgt-a--gagctc-------tg-------------gaa
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               2423 38 -      7577 t--g-gtcg--ct--gata----c--tggttcctggcgt-a--gagctc-------tg-------------gaa
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         6222 38 -      8605 t--g-gtca--tt--gata----c--tgattgctggcac-a--gagctc-------ct-------------aag
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12228748 37 +  27778364 tggg-cctt--t------t----cc-tggtttttagcac-a--gaactc--------c-------t-----aaa
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          3466 37 -      3715 tggg-cctt--t------t----cc-tggtttttagcac-a--gaactc--------c-------t-----aaa
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4471887 38 +   4669795 t--g-atca--tT--GACA----T--GGGTTCCCGGCat-a--gagctc-------ct-------------aaa
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        10435 38 -     19203 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           4857 38 +      8260 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           5084 38 +     27781 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctt-------ct-------------aaa
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         5239 38 -     20310 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           8223 38 +     29689 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            2651 38 +      9989 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          10900 38 -     27936 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                            10930 38 -     11289 t--g-atca--tt--gaca----a--gggttcccggcat-a--gagctc-------ct-------------aaa
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38813305 38 +  39242232 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21219001 38 -  21565898 t--g-atca--tt--gaca----a--gggttcccggcat-a--gagctc-------ct-------------aaa
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       36120 38 -     53127 t--g-atca--tt--gaca----a--gggttcccggcat-a--gagctc-------ct-------------aaa
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        3406 38 +      7159 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       10923 38 -     27947 t--g-atca--tt--gaca----a--gggttcccggcat-a--gagctc-------ct-------------aaa
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         10899 38 +     17596 t--g-atca--tt--gaca----a--gggttcccggcat-a--gagctc-------ct-------------aaa
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                           121 38 +     26000 t--g-atca--tt--gaca----t--gggttcctggcat-a--gagctc-------ct-------------aaa
i Cercopithecus_roloway.k141_2567858                     N 0 C 0
s Cheirogaleus_major.k141_333249                             18001 38 -     52598 t--g-gtct--tt--gaca----g--tggttcctggcac-a--gagatc-------ct-------------aaa
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           13350 38 +     57038 t--g-gtct--tt--gaca----g--tggttcctggcac-a--gagctc-------ct-------------aaa
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           7342 38 +     11226 t--g-gtcg--ct--gaca----c--tgcttcctggcat-a--gagctc-------ct-------------gaa
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18424861 38 -  18827391 t--a-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       11302 38 -     50209 t--a-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135418308 38 + 135778131 t--a-atca--tt--gACA----T--GGGTTCCCAGCat-a--gagctc-------ct-------------aaa
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1906825 38 +   2368649 t--g-atca--tT--GACA----T--GGGTTCCCAGCat-a--gagctc-------ct-------------aaa
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199946494 38 + 200372422 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              33366 38 +     84244 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          11425  2 -     20389 ------------------------------------------------------------------------aa
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 29 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 47233 17 +     63868 --------------------------------------------------------gcacagag-ttcattaaa
i Cricetomys_gambianus.CriGam_scaffold_18520             I 22 C 0
s Crocidura_indochinensis.CroInd_scaffold_239572              2211 25 -      5012 -----------------------C--TGGTTCTCAACCC-A--GAGCTC--------A------------CA-A
i Crocidura_indochinensis.CroInd_scaffold_239572         I 29 I 930
s Cryptoprocta_ferox.CryFer_flattened_line_16129             25801 40 -     87169 ttgg-ctttt-t------tt--ccc-tagttcatagcac-a--gagttc--------c-------t-----aaa
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12534178 37 -  12879189 t--g-gtct--tt--gaca----g--tggttcctggaa--a--gagctc-------ct-------------aaa
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  670601 36 +   1390856 tggg-cct---t------t----cc-tggtttttagcac-a--gaactc--------c-------t-----aaa
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    3356 37 +    198055 tggg-cctt--t------t----cc-tggtttttagcac-a--gaactc--------c-------t-----aaa
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE759718.1                                   8305  2 +     11740 ------------------------------------------------------------------------ga
i Eidolon_helvum.KE759718.1                              I 1 C 0
s Ellobius_lutescens.LOEQ01008920.1                          16743 20 -    110024 t--a-gt----ct--gatt----t--tgattgctt---------------------------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 10
s Ellobius_talpinus.LOJH01109367.1                            2796 20 -      6299 t--a-gt----ct--gatt----t--tgattactt---------------------------------------
i Ellobius_talpinus.LOJH01109367.1                       C 0 I 10
s Enhydra_lutris.KZ291758.1                               16326647 38 -  41312741 gagg-ctttt-t------t----cc-tagttcataacac-a--gacccc--------c-------t-----aaa
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1280642 37 +   4378816 tggg-cttt--t------t----cc-cagttcttagcac-a--gagctt--------c-------t-----aaa
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18528463 37 -  39960074 tggg-cttt--t------t----cc-cagttcttagcac-a--gagctt--------c-------t-----aaa
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               30478 37 +    498745 tggg-cttt--t------t----cc-cagttcttagcac-a--gagctt--------c-------t-----aaa
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21201503 38 -  21539334 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              10682 40 -     14127 t--g-gtct--tt--gaca----g--tggttcctggcac-acagagctc-------ct-------------aaa
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                3380 40 -     16928 t--g-gtct--tt--gaca----g--tggttcctggcac-acagagctc-------ct-------------aaa
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              12413 40 -     25546 t--g-gtct--tt--gaca----g--tggttcctggcac-acagagctc-------ct-------------aaa
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             9598 40 +     26330 t--g-gtct--tt--gaca----g--tggttcctggcac-acagagctc-------ct-------------aaa
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 10854 40 +     23973 t--g-gtct--tt--gaca----g--tggttcctggcac-acagagctc-------ct-------------aaa
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 9598 40 +     75513 t--g-gtct--tt--gaca----g--tggttcctggcac-acagagctc-------ct-------------aaa
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  7549 40 +     97555 t--g-gtct--tt--gaca----g--tggttcctggcac-acagagctc-------ct-------------aaa
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            10477 40 +     26496 t--g-gtct--tt--gaca----g--tggttcctggcac-acagagctc-------ct-------------aaa
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  1082 40 -     17153 t--g-gtct--tt--gaca----g--tggttcctggcac-acagagctc-------ct-------------aaa
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              10657 40 +    111500 t--g-gtct--tt--gaca----g--tggttcctggcac-acagagctc-------ct-------------aaa
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20234501 41 + 206538554 tggg-atttt-t-t----ttt--cc-tagttcatagcac-a--gagctc--------c-------t-----aca
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20193346 41 + 205367284 tggg-atttt-t-t----ttt--cc-tagttcatagcac-a--gagctc--------c-------t-----aca
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  6858 41 -     36744 tggg-atttt-t-t----ttt--cc-tagttcatagcac-a--gagctc--------c-------t-----aca
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_266699               1149 39 +      2098 t--a-gtca--tt--aaca----c--tagttcctggcac-a--gagctc-------ct-------t-----aaa
i Galeopterus_variegatus.GalVar_scaffold_266699          I 2 C 0
s Gorilla_beringei.k141_3596273                              12233 38 -     32273 t--g-atca--tt--gaca----a--gggttcctggcat-a--gagttc-------ct-------------aaa
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186334381 38 + 186649187 t--g-atca--tt--gaca----a--gggttcctggcat-a--gagttc-------ct-------------aaa
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   31457 22 +     78134 T--A-TTTC--tt--gact----c--tggtccctt---------------------------------------
i Graphiurus_murinus.GraMur_scaffold_10447               I 124 I 6
s Hapalemur_alaotrensis.k141_170648                           3745 38 -     19426 t--a-gtct--tt--gaca----g--tggttcctggcac-a--gagctc-------ct-------------aaa
i Hapalemur_alaotrensis.k141_170648                      C 0 I 37
s Hapalemur_gilberti.k141_488810                              8889 38 -     15286 t--a-gtct--tt--gaca----g--tggttcctggcac-a--gagctc-------ct-------------aaa
i Hapalemur_gilberti.k141_488810                         C 0 I 37
s Hapalemur_griseus.k141_1511508                             10527 38 +     18253 t--a-gtct--tt--gaca----g--tggttcctggcac-a--gagctc-------ct-------------aaa
i Hapalemur_griseus.k141_1511508                         C 0 I 37
s Hapalemur_meridionalis.k141_248335                         10630 38 -     41752 t--g-gtct--tt--gaca----g--tggttcctggcac-a--gagctc-------ct-------------aaa
i Hapalemur_meridionalis.k141_248335                     C 0 I 37
s Hapalemur_occidentalis.k141_907772                         10463 38 -     16460 t--g-gtct--tt--gaca----g--tggttcctggcac-a--gagctc-------ct-------------aaa
i Hapalemur_occidentalis.k141_907772                     C 0 I 37
s Helogale_parvula.HelPar_flattened_line_2585               239627 42 +    327341 tggg-ctttt-t------ttttccc-tagttcatagcac-g--gagctc--------c-------t-----aaa
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       109134  2 +   1711038 ------------------------------------------------------------------------aa
i Hipposideros_armiger.JXIK01000431.1                    I 1 I 34
s Hipposideros_galeritus.HipGal_scaffold_29171               40570  2 +     43066 ------------------------------------------------------------------------aa
i Hipposideros_galeritus.HipGal_scaffold_29171           I 1 I 32
s Hoolock_leuconedys.ctg274                                    431076 38 +    630532 t--g-atca--tt--gaca----c--gggttcctggcat-a--gagctc-------ct-------------aaa
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  41803 25 +     55795 --------------------------tagtttatagccc-a--gagctc--------c-------t-----aaa
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 14 C 0
s Hylobates_agilis.k141_307679                               14010 38 -     15490 t--g-atca--tt--gaca----c--gggttcctggcat-a--gagctc-------ct-------------aaa
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              56015 38 +     67168 t--g-atca--tt--gaca----c--gggttcctggcat-a--gagctc-------ct-------------aaa
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189539665 38 - 191637585 t--g-atca--tt--gaca----c--gggttcctggcat-a--gagctc-------ct-------------aaa
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3332558 38 -  11177569 t--g-atca--tt--gaca----c--gggttcctggcat-a--gagctc-------ct-------------aaa
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7516594 21 -   7955117 ---a-gtat--tt--catt----c--tagtttctt---------------------------------------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 6
s Indri_indri.k141_3655594                                   19441 38 +     31101 t--g-gtct--tt--gaca----g--tggttcctgacac-a--gagctc-------ct-------------aaa
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15520991 39 -  30322482 t--g-gtct--tt--gaca----g--tggttcctggcac-a--gagctc-------ct-----g-------aaa
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        4111 38 +     64341 t--g-gtcg--ct--gaca----c--tggttcctggcat-a--gatctc-------ct-------------gaa
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           1171 38 +      4941 t--g-gtcg--ct--gaca----c--tggttcctggcat-a--gatctc-------ct-------------gaa
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4039 38 +     35603 t--g-gtcg--ct--gaca----c--tggttcctggcat-a--gagctc-------ct-------------gaa
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    25469 37 +     38576 t--g-gtca--ct--gaca----c--tggttcctggcat-a--gagctc-------c--------------gga
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         22166 37 +     66356 t--g-gtca--ct--gaca----c--tggttcctggcat-a--gagctc-------c--------------gga
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          7900 38 -     23766 t--g-attt--tt--gaca----g--tggttcttggcac-a--gagctc-------ct-------------aaa
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             25847 38 +     45836 t--g-attt--tt--gaca----g--tggttcttggcac-a--gagctc-------ct-------------aaa
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_320948                           109 38 -      1719 t--g-gttt--tt--gaca----g--tggttcttgacac-a--gagctc-------ct-------------aaa
i Lepilemur_ruficaudatus.k141_320948                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      23902 38 +     54090 t--g-attt--tt--aaca----g--tggttcttggcac-a--gagctc-------ct-------------aaa
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3039794 36 +   3914936 gggg-ctttt-t------t----cc-tagttcatagcag-a--gagctc--------c-------t-----g--
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                              1433433 38 +   1826925 t--g-atca--tt--gaca----t--gggttcccagcat-a--gagctc-------ct-------------aaa
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            2411 35 +     11245 t--g-gtct--tg--gaca----g--tggttcctgg---Na--gaga-c-------ct-------------caa
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1001248 35 +   6120653 t--g-gtct--tg--gaca----g--tggttcctgg---Na--gaga-c-------ct-------------caa
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17952576 38 -  59628241 tgtg-cttt-ct------t----cc-tagttcatagcac-a--gagctc--------c-------t-----aaa
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               3254 38 +     40492 t--g-atca--tt--gaca----t--gggttcctggcat-a--gagctc-------ct-------------aaa
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59672508 38 +  60120075 t--g-atca--tt--gaca----t--gggttcccagcat-a--gagctc-------ct-------------aaa
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  9010 38 -     26193 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            76806 38 -    114318 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  2521 38 -     23192 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                11973 38 -     29190 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  20541 38 +     37952 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186835629 38 + 187317192 t--g-atca--tT--GACA----T--GGGTTCCCGGCat-a--gagctc-------ct-------------aaa
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25454192 38 -  25927173 t--g-atca--tT--GACA----T--GGGTTCCTGGCat-a--gagctc-------ct-------------aaa
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  76390 38 +     89720 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 3387 38 +     20474 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   3189 38 -     14993 t--g-atca--tt--gaca----t--gggttcctggcat-a--gagctc-------ct-------------aaa
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  326060 38 -    668171 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 1491 38 -     24072 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               22128 38 -     45290 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88394  2 +     94391 ------------------------------------------------------------------------ga
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 1 C 0
s Mandrillus_leucophaeus.scaffold280                      23933676 38 -  24302211 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               347852 38 +    752769 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              16803 36 +    737560 tggg-cat---t------t----cc-cagttattagcac-a--gagttc--------c-------t-----aaa
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              48188 36 -    317179 tggg-cat---t------t----cc-aagttattagcac-a--gagctc--------c-------t-----aaa
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         7704  2 -    207569 ------------------------------------------------------------------------aa
i Megaderma_lyra.MegLyr_scaffold_4542                    I 35 C 0
s Marmota_marmota.CZRN01000018.1                          33098906 21 -  40650429 ---a-gtat--tt--catt----c--tagtttctt---------------------------------------
i Marmota_marmota.CZRN01000018.1                         C 0 I 6
s Mellivora_capensis.MelCap_flattened_line_69365              7354 38 +     13704 gagg-ctttttt------t----cc-tagttcataacac-a--gacc-c--------c-------t-----aaa
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 29122 17 +    140813 --------------------------------------------------------acacagag-ttccttaaa
i Meriones_unguiculatus.MerUng_scaffold_7390             I 22 C 0
s Mesocricetus_auratus.KB708134.1                         12179635 22 -  29670104 c--a-gt----ctttggat----t--tgatttctt---------------------------------------
i Mesocricetus_auratus.KB708134.1                        C 0 I 10
s Mico_argentatus.k141_1239457                                2251 38 -      7380 t--g-gtcg--ct--gaca----c--tggttcctggcgt-a--gagctc-------cg-------------gaa
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               1321 38 +     18990 t--g-gtcg--ct--gaca----c--tggttcctggcgt-a--gagctc-------tg-------------gaa
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      2256 38 -      7356 t--g-gtcg--ct--gaca----c--tggttcctggcgt-a--gagctc-------cg-------------gaa
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18288374 38 -  93316391 T--G-GTCT--TT--GACa----g--tggttcctggcac-a--gagctc-------ct-------------aaa
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11256894 20 -  27267610 t--a-gt----ct--gatt----t--tgattactt---------------------------------------
i Microtus_ochrogaster.CM001695.1                        C 0 I 12
s Miopithecus_ogouensis.k141_534055                           5429 38 -     28506 t--g-atca--tt--gaca----t--gggttcccggcgt-a--gagctc-------ct-------------aaa
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         2631 36 -      8324 tggg-ctttt-t------t----cc-tagttcatagcag-a--gtgctc--------c-------t-----g--
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      5944 38 -     37649 t--g-gtct--tt--gaca----g--cggttcctggcac-a--gagctc-------ct-------------aaa
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138708 37 -    366855 ttag-cttt--c------t----c-tcagttcttggcat-a--gagctc--------c-------t-----aaa
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   32734 44 +     37127 tggg-ctttt-t-tt---ttttcc-ttagttcatagccc-g--gagctc--------c-------t-----aaa
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Mus_caroli.LT608237.1                                   84358227 17 - 120012414 --------------------------------------------------------gcacagag-ttacttaaa
i Mus_caroli.LT608237.1                                  I 22 C 0
s Mus_musculus.chr8                                       87647215 17 - 129401213 --------------------------------------------------------gcacagag-ttacttaaa
i Mus_musculus.chr8                                      I 22 C 0
s Mus_pahari.LT608297.1                                   31351496 17 -  89631738 --------------------------------------------------------gcacatag-ttacttaaa
i Mus_pahari.LT608297.1                                  I 22 C 0
s Mus_spretus.CM004101.1                                  90749294 17 - 130317789 --------------------------------------------------------gcacagag-ttacttaaa
i Mus_spretus.CM004101.1                                 I 22 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              3709 22 +     14296 t--g-tttc--tt--tact----c--tagtccctc---------------------------------------
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 50 I 6
s Mustela_putorius.JH418006.1                               298537 38 -  14710649 gagg-ctttt-t------t----cc-tagttcataacac-a--gacccc--------c-------t-----aaa
i Mustela_putorius.JH418006.1                            C 0 C 0
s Nasalis_larvatus.k141_413338                               11426 38 +     21681 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    757243 37 +    783361 ttag-cttt--g------t----cc-gagttcttggcac-g--aggctc--------c-------t-----aaa
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146837 38 -   9404916 tgtg-cttt-ct------t----cc-tagttcatagcac-a--gagctc--------c-------t-----aaa
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102576231 35 - 196305487 t--g-gtct--tg--gaca----g--tggttcctgg---Na--gaga-c-------ct-------------caa
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             3917 35 +      8486 t--g-gtct--tg--gaca----g--tggttcctgg---Na--gaga-c-------ct-------------caa
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105746658 35 + 199412804 t--g-gtct--tg--gaca----g--tggttcctgg---Na--gaga-c-------ct-------------cta
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                              503937 36 -   2017862 tgga-ctttt-t------t----c-ttagttcatagcag-a--cagctc--------c-------t-----g--
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   20992 20 +     28053 t--a-gt----ct--gatt----t--tgattactt---------------------------------------
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 10
s Onychomys_torridus.OnyTor_scaffold_2986                    76430 22 +    102263 c--a-gtct--tt--gatt----t--tgattgctt---------------------------------------
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 10
s Otocyon_megalotis.JAEUCK010005147.1                       459591 38 -    559221 tgtg-cttt-ct------t----cc-tagttcatagcac-a--gagctc--------c-------t-----aaa
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Pan_paniscus.KQ411613.1                                    40350 38 +     80009 t--g-atca--tT--GACA----C--AGGttcctggcat-a--gagttc-------ct-------------aag
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189139242 38 + 189151597 t--g-atca--tT--GACA----C--Gggttcctggcat-a--gagttc-------ct-------------aaa
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  148510 41 +    230217 gggg-atttt-t-t----ttt--cc-tagttcatagcac-a--gagctc--------c-------t-----aca
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                261717 41 +  18783137 gggg-atttt-t-t----ttt--cc-tagttcatagcac-a--gagctc--------c-------t-----aca
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4718364 30 -   8748460 ------------------ttt--cc-tagttcatagcac-a--gagctc--------c-------t-----aca
i Panthera_tigris.KE722367.1                             I 10 C 0
s Papio_anubis.CM001495.2                                183439462 38 + 183742232 t--g-atca--tT--GACA----T--GGGTTCCCAGCat-a--gagctc-------ct-------------aaa
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             3155 38 +     20448 t--g-atca--tt--gaca----t--gggttcccagcat-a--gagctc-------ct-------------aaa
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20559960 38 +  20919399 t--g-atca--tt--gaca----t--gggttcccagcat-a--gagctc-------ct-------------aaa
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   1898 38 +     41871 t--g-atca--tt--gaca----t--gggttcccagcat-a--gagctc-------ct-------------aaa
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     5184 38 +     27711 t--g-atca--tt--gaca----t--gggttcccagcat-a--gagctc-------ct-------------aaa
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  5264 38 +      9205 t--g-atca--tt--gaca----t--gggttcccagcat-a--gagctc-------ct-------------aaa
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272      9972 40 -     78924 tggg-ctttt-t------tt--ccc-taggtcgtagccc-a--gagctc--------c-------t-----aaa
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            6412 42 +     13100 t--g-gtct--ta--gaca----t--tgactcctgg---Na--gaga-ctttctttct-------------aaa
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             4785 42 +     25941 t--g-gtct--ta--gaca----t--tggctcctgg---Na--gaga-ctttctttct-------------aaa
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18191029 22 -  18517816 c--a-gtct--ct--gatt----t--tgattgctg---------------------------------------
i Peromyscus_maniculatus.KI615324.1                      C 0 I 10
s Piliocolobus_badius.k141_1234363                           39938 38 +     62158 t--g-atca--tt--gaca----t--gggttcccggtat-a--gagctc-------ct-------------aaa
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        34660 38 +     89929 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            36076 38 +     51399 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14292314 38 -  14605196 t--g-atca--tT--GACA----T--GGGTTCCCGGCat-a--gagctc-------ct-------------aaa
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189127391 38 + 189387572 t--g-atca--tT--GACA----C--GGGTTCCTGGCat-a--gagctc-------ct-------------aaa
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9566999 38 +   9816681 t--g-atca--tt--gaca----c--gggttcctggcat-a--gagctc-------ct-------------aaa
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               69588 38 -     81375 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              1408 38 +     19060 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2593643 38 -   4620579 T--G-GTCT--TT--GACa----g--tggttcctggcac-a--gagctc-------ct-------------aaa
i Prolemur_simus.MPIZ01000396.1                          C 0 I 37
s Propithecus_coquerelli.NW_012148875.1                     987639 38 +   2598838 T--G-GTCT--TT--GACa----g--tggttcctggcac-a--gagctc-------ct-------------aaa
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          25943 38 +     38485 t--g-gtct--tt--gaca----g--tggttcctggcac-a--gagctc-------ct-------------aaa
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             2102 38 +      4256 t--g-gtct--tt--gaca----g--tggttcctggcac-a--gagctc-------ct-------------aaa
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          23462 38 +     35766 t--g-gtct--tt--gaca----g--tggttcctggcac-a--gagctc-------ct-------------aaa
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           1644 38 -     24134 t--g-gtct--tt--gaca----g--tggttcctggcac-a--gagctc-------ct-------------aaa
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        25457 38 -     67325 t--g-gtct--tt--gaca----g--tggttcctggcac-a--gagctc-------ct-------------aaa
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           1702 38 -      6182 t--g-gtct--tt--gaca----g--tggttcctggcac-a--gagcac-------ct-------------aaa
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             6773 17 -     21651 --------------------------------------------------------acacagag-ttccttaaa
i Psammomys_obesus.NESX01036370.1                        I 22 C 0
s Pteronotus_parnellii.KE909381.1                            12098 37 -     21811 ttag-ctcc--t------t----cc-cagttcttggctc-a--gagctc--------c-------t-----gaa
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         37554 38 +     42204 gagg-ctttt-t------t----cc-tagttcataacac-a--gacccc--------c-------t-----aaa
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22974575  2 +  28871421 ------------------------------------------------------------------------ga
i Pteropus_alecto.KB030862.1                             I 1 C 0
s Pteropus_vampyrus.KN525825.1                             1357665  2 +   4952924 ------------------------------------------------------------------------ga
i Pteropus_vampyrus.KN525825.1                           I 1 C 0
s Puma_concolor.QAVW01001104.1                            20271633 41 -  38429054 tggg-atttt-t-t----ttt--cc-tagttcatagcac-a--gatctc--------c-------t-----aca
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             11419 38 -     91421 t--g-atca--tt--ggca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7605547 38 +   7812017 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11395 38 -     72585 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53567288 22 +  90668790 c--a-gtct--tt--gatt----t--tggctcctt---------------------------------------
i Rattus_norvegicus.chr16                                C 0 I 17
s Rhinopithecus_bieti.k119_217274                             3103 38 -     11128 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91232458 38 - 195417433 t--g-atca--tT--GACA----T--GGGTTCCCGGCat-a--gagctc-------ct-------------aaa
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7668107 38 +   7961872 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85575  2 -     96226 ------------------------------------------------------------------------GA
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 1 C 0
s Saguinus_bicolor.k141_2619299                               4367 38 -      8359 t--g-gtcg--ct--gaca----c--tgcttcctggcat-a--gagctc-------ct-------------gaa
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            10676 38 -     13588 t--g-gtcg--ct--gaca----c--tggttcctggcat-a--gagctc-------ct-------------gaa
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              4312 38 -      6207 t--g-gttg--ct--gaca----c--tggttcctggcat-a--gagctc-------ct-------------gaa
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               10039 38 +     13640 t--g-gttg--ct--gaca----c--tggttcctggcat-a--gagctc-------ct-------------gaa
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               4902 38 +      8564 t--g-gttg--ct--gaca----c--tggttcctggcat-a--gagctc-------ct-------------gaa
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209465180 38 + 209938924 t--g-gtcg--ct--gaca----c--tggttcctggcat-a--gagctc-------ct-------------gaa
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 4392 38 -      9399 t--g-gttg--ct--gaca----c--tggttcctggcat-a--gagctc-------ct-------------gaa
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 1541 38 +      3421 t--g-gtcg--ct--gaca----c--tggttcctggcat-a--gagctc-------ct-------------gaa
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119947740 38 - 121099817 t--g-atcG--CT--GACA----A--TGGTTCCTGGCAT-A--GAGCTC-------CT-------------GAA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       20207 38 +     46362 t--g-atcg--ct--gaca----a--tggttcctggcat-a--gagctc-------ct-------------gaa
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               20302 38 +     45824 t--g-atcg--ct--gaca----a--tggttcctggcat-a--gagctc-------ct-------------gaa
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             36917 38 -     64574 t--g-attg--ct--gaca----a--tggttcctggcat-a--gagctc-------ct-------------gaa
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_1888710                              19138 38 -     19356 t--g-attg--ct--gaca----a--tggttcctggcat-a--gagctc-------ct-------------gaa
i Saimiri_sciureus.k141_1888710                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 20195 38 -     61129 t--g-atcg--ct--gaca----a--tggttcctggcat-a--gagctc-------ct-------------gaa
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          15931 38 -     19888 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      23133 38 +     39453 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            3659 38 +     27826 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             3180 38 -     19483 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      3242 38 +      7198 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         11502 38 +     15514 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    10449 22 -     12148 C--A-TTCT--TT--GATT----T--TGATTTCTT---------------------------------------
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 I 10
s Solenodon_paradoxus.SolPar_flattened_line_5840            188555 38 -    191337 tagatttctt-t------c----c--tggtttttggcac-a--gcgctt--------c-------t-----aaa
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1949678 21 -   3870691 ---a-gtat--tt--catt----c--taatttctt---------------------------------------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 6
s Spilogale_gracilis.SpiGra_flattened_line_13525             28070 38 +     97271 tggg-ctttt-t------t----cc-tggttcttagcac-a--gagctc--------c-------t-----aaa
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              15653 27 -    196729 -----------------------cc-tagttcatagcac-g--gagctc--------c-------t-----aaa
i Suricata_suricatta.SurSur_flattened_line_6629          I 13 C 0
s Sus_scrofa.JH118708.1                                      32622 37 -     47482 tagg-cttt--t------t----cc-ctgttcttggcat-a--gagctt--------c-------t-----aaa
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1089707 38 -   1523678 t--g-atca--tt--gaca----c--aggttcctggcat-a--gagctc-------ct-------------aaa
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 8035 37 +     41958 tgag-cttt--t------t----cc-cagatattgacac-a--gagctc--------c-------t-----aaa
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      116083 37 -    156842 tggg-cttt--t------t----cc-aggtttttagcac-a--gaactt--------c-------t-----aaa
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    384533 37 +    539355 tggg-cttt--t------t----cc-acgtttttagcac-a--gaactt--------c-------t-----aaa
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               11949 38 +     70052 t--g-gtca--tt--gaca----c--tgactgctggcat-a--gagttc-------ct-------------aaa
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               16254 38 +     25099 t--g-gtca--tt--gaca----c--tgactgctggcat-a--gagttc-------ct-------------aaa
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186424828 38 + 186847797 t--g-atca--tT--GACA----T--GGGTTCCCGGCat-a--gagctc-------ct-------------aaa
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          7233 38 -     20410 t--g-atca--tt--gaca----t--gggttcctggcat-a--gagctc-------ct-------------aaa
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    11428 38 +     15221 t--g-atca--tt--gaca----t--gggttcctggcat-a--gagctc-------ct-------------aaa
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        7334 38 +     19930 t--g-atca--tt--gaca----t--gggttcctggcat-a--gagctc-------ct-------------aaa
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       3764 38 -     19997 t--g-atca--tt--gaca----t--gggttcctggcat-a--gagctc-------ct-------------aaa
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            43883 38 -     60166 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        11354 38 -     27529 t--g-atca--tt--gaca----t--gggttcctggcat-a--gagctc-------ct-------------aaa
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     11296 38 -     18194 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           5031 38 -     21137 t--g-atca--tt--gaca----t--gggttcctggcat-a--gagctc-------ct-------------aaa
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    3734 38 -     10723 t--g-atca--tt--gaca----t--gggttcctggcat-a--gagctc-------ct-------------aaa
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         2886 38 +      9834 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        21205 38 +     32220 t--g-atca--tt--gaca----t--gggttcctggcat-a--gagctc-------ct-------------aaa
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5935301 38 +   6242583 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        4548 38 +     20839 t--g-atca--tt--gaca----t--gggttcccggcat-a--gagctc-------ct-------------aaa
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2151848 38 +   4065304 t--g-gtca--tt--gacg----c--cgatttatggcac-a--gaactc-------ca-------------aaa
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     5155 38 -     10553 t--g-gtca--tt--gacg----c--tggtttatggcac-a--gaactc-------ca-------------aaa
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4847799 38 -   5085361 tggg-ctttt-t------t----cc-tagttcattgcac-a--gagctc--------c-------t-----aaa
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   8322 38 +     50397 t--g-gtct--tt--gaca----g--tggttcctggcac-a--gatctc-------ct-------------aaa
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              8377 38 +     24756 t--g-gtct--tt--gacc----g--tggttcctggcac-a--gagctc-------ct-------------aaa
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5369260 38 -   5488506 tgga-attt--c------t----ccccagttcttggcac-a--aaactc--------c-------t-----aaa
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  8251 38 -     43706 tgtg-cttt-ct------t----cc-tagttcatagcac-a--gagctc--------c-------t-----aaa
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        21054 20 -     24430 ---a--tcc--tt--gact----c--tggtttctt---------------------------------------
i Xerus_inauris.XerIna_scaffold_48378                    C 0 I 6
s Zalophus_californianus.ZalCal_flattened_line_17732          2507 36 +     86975 tggg-ctttt-t------t----c-ttagttcatagcag-a--cagctc--------c-------t-----g--
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519  0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188  0 +      1777 C
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      11935  1 +     63895 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383  9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   2809  0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 70244  0 +    116680 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1359220  0 +   3988456 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186890  0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8272963  1 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Galagoides_demidoff.k141_31856                              3354  0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            61949  0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11664308 436 + 224834208 I
e Condylura_cristata.JH655891.1                           17547132  5 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            171068  0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15969  0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            5641  0 -      6351 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     66596  1 -     89534 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       3036 41 +     62944 a-cccttggcatt-tctg-----gagtga-t--------agg-agt-atc---t-t--tt-g-ttac
s Acinonyx_jubatus.LLWD01001279.1                           824677 41 -   1699592 a-cccttggaatt-tcct-----gagtga-t--------ag-gagt-ttc---t-t--tc-a-tttt
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     67568 19 +     87051 a-ccctttgaatt-tgct-----gtg-----------------------------------------
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 6
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507921 41 -  29979442 a-ccctaggaatt-tcct-----gagtga-c--------ag-gagt-atc---t-t--tc-a-tttt
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             76704 41 -    347723 a-cccttggaatt-tcct-----gagtga-t--------ag-gagt-gtc---t-t--tc-a-tttt
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   10966 41 -     52922 a-cccttggaatt-tctg-----gagtga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         10900 41 -     28001 a-cctttggaatt-tctg-----gagtga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          1346 41 -     18505 a-cctttggaatt-tctg-----gagtga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           2195 41 -     12518 a-cctttggaatt-tctg-----gagtga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_2038611                             23374 40 +     24414 g-ccct-gggatt-tctg-----aagtga-t--------agg-agt-gtc---t-t--ct-g-ttgc
i Alouatta_belzebul.k141_2038611                         C 0 C 0
s Alouatta_caraya.k141_885645                                54135 40 +     54689 g-ccct-gggatt-tctg-----aagtga-t--------agg-agt-gtc---t-t--ct-g-ttgc
i Alouatta_caraya.k141_885645                            C 0 C 0
s Alouatta_discolor.k141_2852575                            124724 40 +    125349 g-ccct-gggatt-tctg-----aagtga-t--------agg-agt-gtc---t-t--ct-g-ttgc
i Alouatta_discolor.k141_2852575                         C 0 C 0
s Alouatta_juara.k141_1509701                                21069 40 +     25266 g-ccct-gggatt-tctg-----aggtga-t--------agg-agt-gtc---t-t--ct-g-ttGC
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                            511 40 +      2906 g-ccct-gggatt-tctg-----aagtga-t--------agg-agt-gtc---t-t--ct-g-ttgc
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            14624 40 -     18578 g-ccct-gggatt-tctg-----aagtga-t--------agg-agt-gtc---t-t--ct-g-ttgc
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_668256                              17328 40 +     18088 g-ccct-gggatt-tctg-----aagtga-t--------agg-agt-gtc---t-t--ct-g-ttgc
i Alouatta_palliata.k141_668256                          C 0 C 0
s Alouatta_puruensis.k141_1766044                            18379 40 -     18677 g-ccct-gggatt-tctg-----aggtga-t--------agg-agt-gtc---t-t--ct-g-ttGC
i Alouatta_puruensis.k141_1766044                        C 0 C 0
s Alouatta_seniculus.k141_117119                             11361 40 +     50774 g-ccct-gggatt-tctg-----aggtga-t--------agg-agt-gtc---t-t--ct-g-ttGC
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  11991 40 -     33861 g-ccct-ggtatt-tctg-----aagtga-t--------agg-agt-gtc---t-t--ct-g-ttgc
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            12012 40 -     34016 g-ccct-ggtatt-tctg-----aagtga-t--------agg-agt-gtc---t-t--ct-g-ttgc
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4294407 40 -   5030052 G-CCCT-GGTATT-TCTG-----AAGTGA-T--------AGG-AGT-GTC---T-T--CT-G-TTGC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             12013 40 -     34685 g-ccct-ggtatt-tctg-----aagtga-t--------agg-agt-gtc---t-t--ct-g-ttgc
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               25134 40 -     47192 g-ccct-ggtatt-tctg-----aagtga-t--------agg-agt-gtc---t-t--ct-g-ttgc
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       8576 42 +     20879 a-cccttggaatt-tctt-----gaatga-c--------ag-gact-gtc---ttt--tt-g-ttac
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 6 C 0
s Arctocebus_calabarensis.k141_288239                        16221 41 +     17124 a-tccctgggaat-tcta-----gagtgg-c--------agg-ggt-atc---t-t--tt-g-ttat
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Avahi_laniger.k141_765380                                  50617 41 -     92717 a-cccttgggatt-tcct-----gggtga-c--------aag-agt-gtc---t-t--ct-g-ttgt
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              51246 41 +     85213 a-cccttgggatt-tcct-----gagtga-c--------agg-agt-gtc---t-t--ct-g-ttgt
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             1743 40 -     10423 g-ccct-gggatt-tctg-----aagtga-t--------agg-agt-gtc---t-t--ct-g-ttgc
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             21235 40 +     31915 g-ccct-gggatt-tctg-----aagtga-t--------agg-agt-gtc---t-t--ct-g-ctGC
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            1710 40 +      5267 g-ccct-gggatt-tctg-----aagtga-t--------agg-agt-gtc---t-t--ct-g-ttgc
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23586922 40 - 189096842 g-ccct-gggatt-tCTg-----aagtga-t--------agg-agt-gtc---t-t--CT-G-TTGC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              8454 40 -     12001 g-ccct-gggatt-tctg-----aagtga-t--------agg-agt-gtc---t-t--ct-g-ttgc
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                            9999800 36 -  17673402 a-cccttggaact-tcct-----gagtga-t--------ag-aagt-gtc---t-t--tt-------
i Camelus_bactrianus.KN276810.1                          C 0 I 2
s Camelus_dromedarius.KN272107.1                           2332264 36 -   7040546 a-cccttggaact-tcct-----gagtga-t--------ag-aagt-gtc---t-t--tt-------
i Camelus_dromedarius.KN272107.1                         C 0 I 2
s Camelus_ferus.KB017975.1                                  400540 36 -   1652518 a-cccttggaact-tcct-----gagtga-t--------ag-aagt-gtc---t-t--tt-------
i Camelus_ferus.KB017975.1                               C 0 I 2
s CanFam4.chr16                                           17796666 41 -  60362399 a-gcattggaatt-tcct-----gagtga-t--------ag-gagt-gtc---t-t--tt-a-tttt
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182723 41 -    185531 a-gcattggaatt-tcct-----gagtga-t--------ag-gagt-gtc---t-t--tt-a-tttt
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9032109 41 -   9314153 a-gcattggaatt-tcct-----gagtga-t--------ag-gagt-gtc---t-t--tt-a-tttt
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17956374 41 -  59632846 a-gcattggaatt-tcct-----gagtga-t--------ag-gagt-gtc---t-t--tt-a-tttt
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18497674 41 +  63665305 a-gcattggaatt-tcct-----gagtga-t--------ag-gagt-gtc---t-t--tt-a-tttt
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           142349 40 -    496798 T-CCCTTGGAATT-TATT-----GAGGca-t--------aga-agt-ct----t-t--tt-t-tttt
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    135060 42 +    179628 a-cccttggaattttcct-----gagtga-t--------ag-gagc-atc---c-t--tt-g-ttat
i Castor_canadensis.CasCan_scaffold_2074                 I 16 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     90172 34 +    217609 A-TGATAG--------AA-----GAATGA-T--------AG-AACT-GTC---T-T--CT-A-TTAT
i Catagonus_wagneri.CatWag_scaffold_2839                 I 1 C 0
s Cebuella_niveiventris.k141_1251222                          6363 40 -     11392 g-ccct-gggatt-tctg-----aagtga-t--------agg-agt-gtc---t-t--ct-g-ttgc
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               2461 40 -      7577 g-ccct-gggatt-tctg-----aagtga-t--------agg-agt-gtc---t-t--ct-g-ttgc
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         6260 40 -      8605 t-cccttggaatt-tatt-----gaggca-t--------agg-agt-ct----t-t--tt-t-tttt
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12228785 41 +  27778364 a-tctttggaatt-tcat-----gagtca-t--------ag-gagtgt-c---t-t--tt-g-ttat
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          3503 41 -      3715 a-tctttggaatt-tcat-----gagtca-t--------ag-gagtgt-c---t-t--tt-g-ttat
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4471925 41 +   4669795 a-cccttggaatt-tctg-----GAGTGA-T--------AGG-AGT-GTC---T-T--TT-G-TTAC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        10473 41 -     19203 a-cccttggaatt-tctg-----gagtga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           4895 41 +      8260 a-cccttggaatt-tctg-----gagtga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           5122 41 +     27781 a-cccttggaatt-tctg-----gagtga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         5277 41 -     20310 a-cccttggaatt-tctg-----gagtga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           8261 41 +     29689 a-cccttggaatt-tctg-----gagtga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            2689 41 +      9989 a-cccttggaatt-tctg-----gagtga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          10938 41 -     27936 a-cccttggaatt-tctg-----gagtga-c--------agg-agt-gtc---t-t--tt-g-ttac
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                            10968 41 -     11289 a-cccttggaatt-tctg-----gagtga-c--------agg-agt-gtc---t-t--tt-g-ttac
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38813343 41 +  39242232 a-cccttggaatt-tctg-----gagtga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21219039 41 -  21565898 a-cccttggaatt-tctg-----gagtga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       36158 41 -     53127 a-cccttggaatt-tctg-----gagtga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        3444 41 +      7159 a-ccctcggaatt-tctg-----gagtga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       10961 41 -     27947 a-cccttggaatt-tctg-----gagtga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         10937 41 +     17596 a-cccttggaatt-tctg-----gagtga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                           159 41 +     26000 a-cccttggaatt-tctg-----gagtga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             18039 41 -     52598 a-cccttgggatt-tcct-----gagtga-c--------agg-agt-gtc---t-t--tt-g-ttat
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           13388 41 +     57038 a-cccttgggatt-tcct-----gagtga-t--------agg-agt-gtc---t-t--tt-g-ttat
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           7380 40 +     11226 g-ccct-gggatt-tctg-----aagtga-c--------agg-aat-gtc---t-t--ct-g-ctgc
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18424899 41 -  18827391 a-cccttggaatt-tctg-----gagtga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       11340 41 -     50209 a-cccttggaatt-tctg-----gagtga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135418346 41 + 135778131 a-cccttggaatt-tctg-----GAGTGA-T--------AGG-AGT-GTC---T-T--TT-G-TTAC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1906863 23 +   2368649 a-cccttggaatt-tctg-----TAGAGA-T------------------------------------
i Colobus_angolensis.KN981557.1                          C 0 I 15
s Colobus_guereza.LG01                                   199946532 41 + 200372422 a-cccttggaatt-tctg-----tagaga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              33404 41 +     84244 a-cccttggaatt-tctg-----tagaga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          11427 31 -     20389 g-cccttgaaatt-tcct-----gagtga-t--------aa-gagt-gt------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 47250 38 +     63868 a-ccttctgaatt-tcct-----attgga-t--------ag-gagc-atc---t-t--tt-g-t---
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_374261               128 39 +      3208 A-GC---AGAATA-TTCT-----GAAGAA-T----GGGGG--C--T-GTC---T-T--TA-G-ATGC
i Crocidura_indochinensis.CroInd_scaffold_374261         n 930 n 930
s Cryptoprocta_ferox.CryFer_flattened_line_16129             25841 41 -     87169 a-cccttggaatt-ccct-----gagtga-t--------ag-aggt-gtc---t-t--tc-a-attt
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12534215 41 -  12879189 a-cccttggcatt-tcct-----gagtga-c--------agg-act-gtt---t-t--ct-g-ctat
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  670637 41 +   1390856 a-tctttggaatt-tcat-----gagtca-t--------ag-gagtgt-c---t-t--tt-g-ttat
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    3393 41 +    198055 a-tctttggaatt-tcat-----gagtca-t--------ag-gagtgt-c---t-t--tt-g-ttat
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE759718.1                                   8307 42 +     11740 g-cccttggaatt-tcct-----gagtgatt--------ag-aggt-gtc---c-t--tt-g-ttAT
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          16773 38 -    110024 a-ccctttgaatt-tgct-----gtgtga-c--------at-gaac-atc---t-t--ct-g-t---
i Ellobius_lutescens.LOEQ01008920.1                      I 10 C 0
s Ellobius_talpinus.LOJH01109367.1                            2826 38 -      6299 a-ccctttgaatt-tgat-----gtgtga-c--------at-gaac-atc---t-t--ct-g-t---
i Ellobius_talpinus.LOJH01109367.1                       I 10 C 0
s Enhydra_lutris.KZ291758.1                               16326685 41 -  41312741 a-cccttggaatt-tcct-----gagtga-t--------ag-gagt-gtc---t-t--tc-a-cttt
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1280679 39 +   4378816 a-tctttggaatt-tcct-----gagtga-t--------ag-aagt---c---c-c--tt-g-ttat
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18528500 39 -  39960074 a-tctttggaatt-tcct-----gagtga-t--------ag-aagt---c---c-c--tt-g-ttat
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               30515 39 +    498745 a-tctttggaatt-tcct-----gagtga-t--------ag-aagt---c---c-c--tt-g-ttat
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21201541 41 -  21539334 a-cccttggaatt-tctg-----gagtga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              10722 41 -     14127 a-cccttgggatt-tcct-----gagtga-c--------agg-agt-gtc---t-t--tc-g-ttgt
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                3420 41 -     16928 a-cccttgggatt-tcct-----gagtga-c--------agg-agt-gtc---t-t--tc-g-ttgt
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              12453 41 -     25546 a-cccttgggatt-tcct-----gggtga-c--------agg-agt-gtc---t-t--tc-g-ttgt
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             9638 41 +     26330 a-cccttgggatt-tcct-----gggtga-c--------agg-agt-gtc---t-t--tc-g-ttgt
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 10894 41 +     23973 a-cccttgggatt-tcct-----gagtga-c--------agg-agt-gtc---t-t--tc-g-ttgt
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 9638 41 +     75513 a-cccttgggatt-tcct-----gggtga-c--------agg-agt-gtc---t-t--tc-g-ttgt
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  7589 41 +     97555 a-cccttgggatt-tcct-----gagtga-c--------agg-agt-gtc---t-t--tc-g-ttgt
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            10517 41 +     26496 a-cccttgggatt-tcct-----gagtga-c--------agg-agt-gtc---t-t--tc-g-ttgt
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  1122 41 -     17153 a-cccttgggatt-tcct-----gagtga-c--------agg-agt-gtc---t-t--tc-g-ttgt
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              10697 42 +    111500 a-cccttgggatt-tcct-----gagtga-c--------agg-agt-gtc---t-t--tc-agttgt
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20234542 41 + 206538554 a-cccttggaatt-tcct-----gagtga-t--------ag-gagt-ttc---t-t--tc-a-tttt
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20193387 41 + 205367284 a-cccttggaatt-tcct-----aagtga-t--------ag-gagt-ttc---t-t--tc-a-tttt
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  6899 41 -     36744 a-cccttggaatt-tcct-----gagtga-t--------ag-gagt-ttc---t-t--tc-a-tttt
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_266699               1188 40 +      2098 a-cccttggaatt-tctt-----gagtga-t--------tg--agt-agt---t-t--tt-t-ttat
i Galeopterus_variegatus.GalVar_scaffold_266699          C 0 C 0
s Gorilla_beringei.k141_3596273                              12271 41 -     32273 a-cccttggcatt-tctg-----gagtga-t--------agg-agt-atc---t-t--tt-g-ttac
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186334419 41 + 186649187 a-cccttggcatt-tctg-----gagtga-t--------agg-agt-atc---t-t--tt-g-ttac
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   31485 23 +     78134 a-ctcttggaatt-tctt-----gaatga-t------------------------------------
i Graphiurus_murinus.GraMur_scaffold_10447               I 6 I 18
s Hapalemur_alaotrensis.k141_1720546                         42651 32 +     55949 a-cccgtggaact-tcct-----aaatga-t--------aaa-ggt-gat-----------------
i Hapalemur_alaotrensis.k141_1720546                     n 37 I 3
s Hapalemur_gilberti.k141_339145                             25353 32 +     40576 a-cccgtggaact-tcct-----aaatga-t--------aaa-ggt-gat-----------------
i Hapalemur_gilberti.k141_339145                         n 37 I 183
s Hapalemur_griseus.k141_305293                              17271 32 +     29761 a-cccgtggaact-tcct-----aaatga-t--------aaa-ggt-gat-----------------
i Hapalemur_griseus.k141_305293                          n 37 I 183
s Hapalemur_meridionalis.k141_659797                         42667 32 -     73828 a-cccgtggaact-tcct-----aaatga-t--------aaa-ggt-gat-----------------
i Hapalemur_meridionalis.k141_659797                     n 37 I 184
s Hapalemur_occidentalis.k141_380049                         31442 32 -     62596 a-cccgtggaact-tcct-----aaatga-t--------aaa-ggt-gat-----------------
i Hapalemur_occidentalis.k141_380049                     n 37 I 3
s Helogale_parvula.HelPar_flattened_line_2585               239669 41 +    327341 a-cccatggaatt-ccct-----gagtaa-t--------ag-aggt-gtc---t-t--tc-a-tttt
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       109170 41 +   1711038 g-cccttgaaatt-tcct-----gagtga-c--------ag-gagt-gtc---t-t--ct-g-ttat
i Hipposideros_armiger.JXIK01000431.1                    I 34 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               40604 41 +     43066 g-cccttgaaatg-tcct-----gagtga-c--------ag-gagt-atc---t-t--ct-g-ttat
i Hipposideros_galeritus.HipGal_scaffold_29171           I 32 C 0
s Hoolock_leuconedys.ctg274                                    431114 41 +    630532 a-cccttggaatt-tctg-----gagtga-t--------agg-agt-atc---t-t--tt-g-ttac
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  41828 41 +     55795 a-cccttggaatt-ccct-----gagtga-t--------ac-aagt-gtc---t-t--tc-a-tttt
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_307679                               14048 32 -     15490 a-cccttggaatt-tctg-----gagtga-c--------agg-agt-atc-----------------
i Hylobates_agilis.k141_307679                           C 0 I 8
s Hylobates_klossii.k141_282416                              56053 41 +     67168 a-cccttggaatt-tctg-----gagtga-t--------agg-agt-atc---t-t--tt-g-ttac
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189539703 41 - 191637585 a-cccttggaatt-tctg-----gagtga-t--------agg-agt-atc---t-t--tt-g-ttac
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3332596 41 -  11177569 a-cccttggaatt-tctg-----gagtga-t--------agg-agt-atc---t-t--tt-g-ttac
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7516621 22 -   7955117 a-tccctggaatt-tctt-----gaatga--------------------------------------
i Ictidomys_tridecemlineatus.JH393364.1                  I 6 I 26
s Indri_indri.k141_3655594                                   19479 41 +     31101 a-cccttgggatt-tcct-----gagtga-c--------agg-agt-gtc---t-t--tt-g-ttgt
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15521030 22 -  30322482 a-cccttggaatt-tcct-----gacaga--------------------------------------
i Lemur_catta.scaffold_24                                C 0 I 15
s Leontocebus_fuscicollis.k141_1820339                        4149 40 +     64341 g-ccct-gggatt-tctg-----aagtga-t--------agg-agt-gtc---c-t--ct-g-ttgc
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           1209 40 +      4941 g-ccct-gggatt-tctg-----aagtga-t--------agg-agt-gtc---c-t--ct-g-ttgc
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4077 40 +     35603 g-ccct-ggtatt-tctg-----aagtga-t--------agg-agt-gtc---c-t--ct-g-ttgc
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    25506 40 +     38576 g-ccct-gggatt-tctg-----aagtga-a--------agg-agt-gtc---t-t--ct-g-ttgc
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         22203 40 +     66356 g-ccct-gggatt-tctg-----aagtga-a--------agg-agt-gtc---t-t--ct-g-ttgc
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          7938 11 -     23766 a-ccctttgggg-------------------------------------------------------
i Lepilemur_ankaranensis.k141_596936                     C 0 I 9
s Lepilemur_dorsalis.k141_577674                             25885 11 +     45836 a-ccctttgggg-------------------------------------------------------
i Lepilemur_dorsalis.k141_577674                         C 0 I 9
s Lepilemur_ruficaudatus.k141_320948                           147 41 -      1719 a-ccctttggatt-tcct-----gagtga-c--------agg-ggt-gtc---a-c--ct-g-ttgt
i Lepilemur_ruficaudatus.k141_320948                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      23940 11 +     54090 a-ccctttgggg-------------------------------------------------------
i Lepilemur_septentrionalis.k141_185316                  C 0 I 9
s Leptonychotes_weddellii.KB714746.1                       3039830 40 +   3914936 --ttttaggaatt-tcct-----gagtga-t--------ag-gagt-gtc---t-t--tc-a-tttt
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                              1433471 41 +   1826925 a-cccttggaatt-tctg-----gagtga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            2446 41 +     11245 a-tctctgggatt-tctg-----gagtgg-c--------aag-ggt-gtc---t-t--tt-g-ttat
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1001283 41 +   6120653 a-tctctgggatt-tctg-----gagtgg-c--------aag-ggt-gtc---t-t--tt-g-ttat
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17952614 41 -  59628241 a-gcattggaatt-tcct-----gagtga-t--------ag-gagt-gtc---t-t--tt-a-tttt
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               3292 41 +     40492 a-cccttggaatt-tctg-----gagtga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59672546 41 +  60120075 a-cccttggaatt-tctg-----gagtga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  9048 41 -     26193 a-cccttggaatt-tctg-----gagtga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            76844 41 -    114318 a-cccttggaatt-tctg-----gagtga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  2559 41 -     23192 a-cccttggaatt-tctg-----gagtga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                12011 41 -     29190 a-cccttggaatt-tctg-----gagtga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  20579 41 +     37952 a-cccttggaatt-tctg-----gagtga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186835667 41 + 187317192 a-cccttggaatt-tctg-----gagtga-t--------agg-agt-gtc---t-t--tt-g-ttAC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25454230 41 -  25927173 a-cccttggaatt-tctg-----GAGTGA-T--------AGG-AGT-GTC---T-t--tt-g-ttac
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  76428 41 +     89720 a-cccttggaatt-tctg-----gagtga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 3425 41 +     20474 a-cccttggaatt-tctg-----gagtga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   3227 41 -     14993 a-cccttggaatt-tctg-----gagtga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  326098 40 -    668171 a-cccttggaatt-tctg-----gagtga-t--------agg-agt-gtc---t-t--t--g-ttac
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 1529 41 -     24072 a-cccttggaatt-tctg-----gagtga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               22166 41 -     45290 a-cccttggaatt-tctg-----gagtga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88396 42 +     94391 g-cccttggaatt-tcct-----gagtggtt--------ag-gggt-gtc---c-t--tt-g-ttat
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23933714 41 -  24302211 a-cccttggaatt-tctg-----gagtga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               347890 41 +    752769 a-cccttggaatt-tctg-----gagtga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              16839 35 +    737560 a-tacttgggatt-tcct-----gagtga-t--------gg-aagt-atc---t-g--t--------
i Manis_javanica.JSZB01003497.1                          C 0 I 3
s Manis_pentadactyla.KN006162.1                              48224 35 -    317179 a-tccttgggatt-tcct-----gagtga-t--------gg-aagt-atc---t-g--t--------
i Manis_pentadactyla.KN006162.1                          C 0 I 3
s Marmota_marmota.CZRN01000018.1                          33098933 22 -  40650429 a-tccctggaatt-tctt-----gaatga--------------------------------------
i Marmota_marmota.CZRN01000018.1                         I 6 I 26
s Megaderma_lyra.MegLyr_scaffold_4542                         7706 42 -    207569 g-cccttggaatt-tcct-----gagtga-t--------at-ggtt-gtc---t-t--tttt-ttat
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              7392 41 +     13704 a-cccttggaatt-tccc-----aagtga-t--------ag-gagt-gtc---t-t--tc-a-cttt
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 29139 38 +    140813 g-ctctttgaatt-ttct-----gaatga-c--------ag-ga----tcatat-t--tt-g-t---
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12179667 38 -  29670104 a-tcctttgaatt-tgct-----gtgtga-t--------at-gatc-atc---t-t--gt-g-t---
i Mesocricetus_auratus.KB708134.1                        I 10 C 0
s Mico_argentatus.k141_1239457                                2289 40 -      7380 g-ccct-gggatt-tctg-----aagtga-t--------agg-agt-gtc---t-t--ct-g-ttgc
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               1359 40 +     18990 g-ccct-gggatt-tctg-----aagtga-t--------agg-agt-gtc---t-t--ct-g-ttgc
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      2294 40 -      7356 g-ccct-gggatt-tctg-----aagtga-t--------agg-agt-gtc---t-t--ct-g-ttgc
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18288412 41 -  93316391 a-cccttgggatt-tcct-----gagtga-c--------agg-agt-gtc---t-t--tt-g-ttat
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11256926 38 -  27267610 a-ccctttgaatt-tgct-----gtgtga-c--------at-gagc-atc---t-t--ct-g-t---
i Microtus_ochrogaster.CM001695.1                        I 12 C 0
s Miopithecus_ogouensis.k141_534055                           5467 41 -     28506 a-cccttggaatt-tctg-----gagtga-t--------ggg-agt-gtc---t-t--tt-g-ttac
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         2667 40 -      8324 --ttttaggaatt-tcct-----gagtga-t--------aa-gagt-gtc---t-t--tc-a-tttt
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      5982 41 -     37649 a-cccttgggatt-tcct-----gagtga-c--------atg-agg-gtc---t-t--tt-g-ttat
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138745 36 -    366855 g-ctcttgaaatt-tcct-----gagtga-t--------gg-gcat-gtc---t-t--tt-------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   32778 41 +     37127 a-cccttggaatt-ccct-----gagtaa-t--------ag-aggt-gtc---t-t--tc-a-gttt
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Mus_caroli.LT608237.1                                   84358244 35 - 120012414 g-ccctttgaatc-tgct-----gtgtaa-t--------ag-aat----c---t-t--ta-g-t---
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87647232 35 - 129401213 g-ccctttgaatc-tgct-----gtgtaa-t--------ag-aat----c---t-t--ta-g-t---
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31351513 39 -  89631738 g-ccctttgaatt-tgct-----gtgtag-t--------ag-aatctatc---t-t--tt-g-t---
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90749311 35 - 130317789 g-ccctttgaatc-tgct-----gtgtaa-t--------ag-aat----c---t-t--ta-g-t---
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              3737 48 +     14296 a-cccttggaatt-cctt-----taacga-tcagagtgca--gagt-gac---t-t--tt-g-ttat
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 6 C 0
s Mustela_putorius.JH418006.1                               298575 40 -  14710649 g-cccttggaatt-tcct-----gagtaa-t--------ag-gagt-gtc---t-t--tc-a-ctt-
i Mustela_putorius.JH418006.1                            C 0 C 0
s Nasalis_larvatus.k141_413338                               11464 41 +     21681 a-cccttggaatt-tctg-----gagaga-c--------agg-agt-gtc---t-t--tt-g-ttac
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    757280 46 +    783361 g-cccttaaaatt-tccttcactacacga-c--------at-gagt-gtc---t-t--tt-g-ttat
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146875 41 -   9404916 a-gcattggaatt-tcct-----gagtga-t--------ag-gagt-gtc---t-t--tc-a-tttt
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102576266 41 - 196305487 a-cccctgggatt-tctg-----gagtgg-c--------agg-ggt-ctc---t-t--tt-g-ttat
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             3952 41 +      8486 a-cccctgggatt-tctg-----gagtgg-c--------agg-ggt-ctc---t-t--tt-g-ttat
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105746693 41 + 199412804 a-cccctgggatt-tctg-----gagtgg-c--------agg-ggt-ctc---t-t--tt-g-ttat
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1359220  9 +   3988456 ------------------------------------------------AC---T-T--CT-G-TG--
i Ochotona_princeps.JH802162.1                           C 0 I 220
s Odobenus_rosmarus.KB229312.1                              503973 40 -   2017862 --ttctaggaaat-tcct-----gagtga-t--------ag-gagt-gtc---t-t--tc-a-tttt
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   21022 38 +     28053 a-cccttTGAATT-TGCT-----GTGTGA-C--------AT-GAGC-ATC---T-T--CT-G-T---
i Ondatra_zibethicus.OndZib_scaffold_46174               I 10 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    76462 38 +    102263 a-tcctttgattt-tgct-----gtgtga-t--------at-gagc-atc---t-t--tt-g-t---
i Onychomys_torridus.OnyTor_scaffold_2986                I 10 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       459629 41 -    559221 a-gcactggaatt-tcct-----gagtga-t--------ag-gagt-gtc---t-t--tt-a-tttt
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Pan_paniscus.KQ411613.1                                    40388 41 +     80009 a-ccgttggcatt-tctg-----gagtga-t--------agg-agt-atc---t-t--tt-g-ttac
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189139280 41 + 189151597 a-ccgttggcatt-tctg-----gagtga-t--------agg-agt-atc---t-t--tt-g-ttac
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  148551 41 +    230217 a-cccttggaatt-tcct-----gagtaa-t--------ag-gagt-ttc---t-t--tc-a-tttt
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                261758 41 +  18783137 a-cccttggaatt-tcct-----gagtaa-t--------ag-gagt-ttc---t-t--tc-a-tttt
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4718394 41 -   8748460 a-cccttggaatt-tcct-----gagtaa-t--------ag-gagt-ttc---t-t--tc-a-tttt
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183439500 41 + 183742232 a-cccttggaatt-tctg-----gagtga-t--------agg-agt-gtc---t-t--tt-g-tTAC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             3193 41 +     20448 a-cccttggaatt-tctg-----gagtga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20559998 41 +  20919399 a-cccttggaatt-tctg-----gagtga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   1936 41 +     41871 a-cccttggaatt-tctg-----gagtga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     5222 41 +     27711 a-cccttggaatt-tctg-----gagtga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  5302 41 +      9205 a-cccttggaatt-tctg-----gagtga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10012 41 -     78924 a-tccttggaatt-tccc-----gagtga-t--------ag-gagt-gtc---t-t--tc-a-tttt
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            6454 41 +     13100 a-cccctgggaat-tctg-----gagtgg-a--------agg-gat-gtc---t-t--tt-g-ttat
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             4827 41 +     25941 a-cccctgggaat-tctg-----gagtgg-t--------agg-gat-gtc---t-t--tt-g-ttat
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18191061 38 -  18517816 a-ccctttgatct-tgct-----gtgtga-t--------ac-gaac-atc---t-t--tt-g-t---
i Peromyscus_maniculatus.KI615324.1                      I 10 C 0
s Piliocolobus_badius.k141_1234363                           39976 41 +     62158 a-cccttggaatt-tctg-----tagaga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        34698 41 +     89929 a-cccttggaatt-tctg-----tagaga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            36114 41 +     51399 a-cccttggaatt-tctg-----tagaga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14292352 41 -  14605196 a-cccttggaatt-tctg-----tagaga-t--------agg-agt-gtc---t-t--tt-g-ttaC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189127429 41 + 189387572 a-cccttggaatt-tctg-----GAGTGA-T--------AGG-AGT-ATC---T-T--TT-G-TTAC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9567037 41 +   9816681 a-cccttagaatt-tctg-----gagtga-t--------agg-agt-atc---t-t--tt-g-ttac
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               69626 41 -     81375 a-cccttggaatt-tctg-----gagaga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              1446 41 +     19060 a-cccttggaatt-tctg-----gagaga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000849.1                            3563471 32 -   3616207 A-CCCTTGGAACT-TCCT-----AAATGA-T--------AAA-GGT-GAT-----------------
i Prolemur_simus.MPIZ01000849.1                          n 37 I 185
s Propithecus_coquerelli.NW_012148875.1                     987677 40 +   2598838 a-cccttgggaTT-TCCT-----GAGTGA-C--------GAG-AGT-GTC---T-T---T-G-TTGT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          25981 40 +     38485 a-cccttgggatt-tcct-----gagtga-c--------gag-agt-gtc---t-t---t-g-ttgt
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             2140 40 +      4256 a-cccttgggatt-tcct-----gagtga-c--------gag-agt-gtc---t-t---t-g-ttgt
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          23500 40 +     35766 a-cccttgggatt-tcct-----gagtga-c--------gag-agt-gtc---t-t---t-g-ttgt
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           1682 40 -     24134 a-cccttgggatt-tcct-----gagtga-c--------gag-agt-gtc---t-t---t-g-ttgt
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        25495 40 -     67325 a-cccttgggatt-tcct-----gagtga-c--------gag-agt-gtc---t-t---t-g-ttgt
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           1740 40 -      6182 a-cccttgggatt-tcct-----gagtga-c--------gag-agt-gtc---t-t---t-g-ttgt
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             6790 38 -     21651 g-ctctttgaatt-ttct-----gagtga-c--------ag-ga----tcatat-t--tt-g-t---
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            12135 41 -     21811 g-cccttgaaatt-tcct-----gaataa-c--------gg-gcct-gtc---t-t--tt-g-ttat
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         37592 41 +     42204 a-cccttggaatt-tcct-----gagtga-t--------ag-gagt-gtc---t-t--tc-a-cttc
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22974577 42 +  28871421 g-cccttggaatt-tcct-----gagtggtT--------AG-GGAT-GTC---C-T--TT-G-TTAT
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1357667 42 +   4952924 g-ccCTTAGAATT-TCCT-----GAGTGGTT--------AG-GGAT-GTC---C-T--TT-G-TTAT
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20271674 41 -  38429054 a-cccttggaatt-tcct-----gagtga-t--------ag-gagt-ttc---t-t--tc-a-tttt
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             11457 41 -     91421 a-cccttggaatt-tctg-----gagaga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7605585 41 +   7812017 a-cccttggaatt-tctg-----gagaga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11433 41 -     72585 a-cccttggaatt-tctg-----gagaga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53567327 38 +  90668790 g-ccctttgaatt-tgct-----gtgtaa-c--------ag-gaac-atc---t-t--tt-g-t---
i Rattus_norvegicus.chr16                                I 17 C 0
s Rhinopithecus_bieti.k119_217274                             3141 41 -     11128 a-cccttggaatt-tctg-----gagaga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91232496 41 - 195417433 a-cccttggaatt-tctg-----GAGAga-t--------agg-agt-gtc---t-t--tt-g-ttAC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7668145 41 +   7961872 a-cccttggaatt-tctg-----gagaga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85577 41 -     96226 G-CTCTTGGAATT-TCCT-----GAGTGGTT--------AG-GGGT-GTC---C-T--TT-G-TTA-
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               4405 40 -      8359 g-ccct-gggatt-tctg-----aagtga-c--------agg-aat-gtc---t-t--ct-g-ctgc
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            10714 40 -     13588 g-ccct-ggtatt-tctg-----aagtgg-c--------agg-agt-gtc---t-t--ct-g-ttgc
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              4350 40 -      6207 g-ccct-ggtatt-tctg-----aagtga-c--------agg-agt-gtc---t-t--ct-g-ttgc
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               10077 40 +     13640 g-ccct-ggtatt-tctg-----aagtga-c--------agg-agt-gtc---t-t--ct-g-ttgc
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               4940 40 +      8564 g-ccct-ggtatt-tctg-----aagtga-c--------agg-agt-gtc---t-t--ct-g-ttgc
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209465218 40 + 209938924 g-ccct-gggatt-tctg-----aagtga-c--------agg-aat-gtc---t-t--ct-g-ttgc
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 4430 40 -      9399 g-ccct-ggtatt-tctg-----aagtga-c--------agg-agt-gtc---t-t--ct-g-ttgc
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 1579 40 +      3421 g-ccct-ggtatt-tctg-----aagtgg-c--------agg-agt-gtc---t-t--ct-g-ttgc
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119947778 40 - 121099817 G-CCCT-GGGATT-TCTG-----AAGTGC-T--------AGG-AGT-GTC---T-T--CT-G-TGGC
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       20245 40 +     46362 g-ccct-gggatt-tctg-----aagtgc-t--------agg-agt-gtc---t-t--ct-g-tggc
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               20340 40 +     45824 g-ccct-gggatt-tctg-----aagtgc-t--------agg-agt-gtc---t-t--ct-g-tggc
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             36955 40 -     64574 g-ccct-gggatt-tctg-----aagtgc-t--------agg-agt-gtc---t-t--ct-g-tggc
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_1888710                              19176 40 -     19356 g-ccct-gggatt-tctg-----aagtgc-t--------agg-agt-gtc---t-t--ct-g-tggc
i Saimiri_sciureus.k141_1888710                          C 0 N 0
s Saimiri_ustus.k141_1484609                                 20233 40 -     61129 g-ccct-gggatt-tctg-----aagtgc-t--------agg-agt-gtc---c-t--ct-g-tggc
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          15969 41 -     19888 a-cccttggaatt-tctg-----gagaga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      23171 41 +     39453 a-cccttggaatt-tctg-----gagaga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            3697 41 +     27826 a-cccttggaatt-tctg-----gagaga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             3218 41 -     19483 a-cccttggaatt-tctg-----gagaga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      3280 41 +      7198 a-cccttggaatt-tctg-----gagaga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         11540 41 +     15514 a-cccttggaatt-tctg-----gagaga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    10481 38 -     12148 A-CCTTTTGAATA-TGCT-----GTGTGA-T--------AT-GATC-ATC---T-T--TT-G-T---
i Sigmodon_hispidus.SigHis_scaffold_60841                I 10 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            188593 43 -    191337 a-cccttggaatt-tcct-----gaggga-t--------aa-aact-gta---t-ttgtt-a-tgat
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1949705 22 -   3870691 a-tccctggaatt-tctt-----gaatga--------------------------------------
i Spermophilus_dauricus.KZ294078.1                       I 6 I 26
s Spilogale_gracilis.SpiGra_flattened_line_13525             28108 41 +     97271 a-ccctcggaatt-tcct-----cagtga-t--------ag-gagt-gtc---t-t--tc-a-ttct
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              15680 36 -    196729 a-ccct-----tt-cccc-----gagtaa-t--------ag-aggt-gtc---t-t--tc-a-gttt
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.JH118708.1                                      32659 41 -     47482 a-cccttggaatt-tccc-----aaatga-t--------ag-aagt-gtc---t-t--ct-g-ttat
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1089745 41 -   1523678 a-cccttggaatt-tctg-----gagtga-t--------agg-agt-atc---t-t--tt-g-ttac
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 8072 41 +     41958 g-cccttggaatt-tcct-----gagtga-t--------gc-gact-gtc---t-t--tt-g-ttat
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      116120 41 -    156842 a-tctttggaatt-tcct-----gagtga-t--------ag-gagtgt-c---t-t--tt-g-ttat
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    384570 41 +    539355 a-tctttggaatt-tcct-----gagtga-t--------ag-gagtgt-c---t-t--tt-g-ttat
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               11987 42 +     70052 gtcccttggaatt-tatt-----gaggca-t--------agg-agt-gtc---t-t--tt-t-tttt
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               16292 42 +     25099 gtcccttggaatt-tatt-----gaggca-t--------agg-agt-gtc---t-t--tt-t-tttt
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186424866 41 + 186847797 a-cccttggaatt-tctg-----gagtga-t--------agg-agt-gtc---t-t--tt-g-tTAC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          7271 41 -     20410 a-cccttggaatt-tctg-----gagaga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    11466 41 +     15221 a-cccttggaatt-tctg-----gagaga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        7372 41 +     19930 a-cccttggaatt-tctg-----gagaga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       3802 41 -     19997 a-cccttggaatt-tctg-----gagaga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            43921 41 -     60166 a-cccttggaatt-tctg-----gagaga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        11392 41 -     27529 a-cccttggaatt-tctg-----gagaga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     11334 41 -     18194 a-cccttggaatt-tctg-----gagata-t--------agg-agt-gtc---t-t--tt-g-ttac
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           5069 41 -     21137 a-cccttggaatt-tctg-----gagaga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    3772 41 -     10723 a-cccttggaatt-tctg-----gagaga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         2924 41 +      9834 a-cccttggaatt-tctg-----gagaga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        21243 41 +     32220 a-cccttggaatt-tctg-----gagaga-t--------agg-agt-ctc---t-t--tt-g-ttac
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5935339 41 +   6242583 a-cccttggaatt-tctg-----gagaga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        4586 41 +     20839 a-cccttggaatt-tctg-----gagaga-t--------agg-agt-gtc---t-t--tt-g-ttac
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2151886 12 +   4065304 g-cccttggaatt------------------------------------------------------
i Tupaia_chinensis.KB320699.1                            C 0 I 10
s Tupaia_tana.TupTan_flattened_line_97126                     5193 12 -     10553 g-cccttggaatt------------------------------------------------------
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4847837 41 -   5085361 a-ccctaggaatt-tcct-----gagtga-t--------ag-gagt-atc---t-t--tc-a-tttt
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   8360 41 +     50397 a-cccctgggatt-tcct-----gagtga-c--------agg-agt-gcc---t-t--tc-a-ttgt
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              8415 41 +     24756 a-cccctgggatt-tcct-----gagtga-c--------agg-agt-gtc---t-t--tt-g-ttgt
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5369298 41 -   5488506 a-cccttggaact-tcct-----gagtga-t--------ag-aagt-gtc---t-t--tt-a-ttat
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  8289 37 -     43706 a-gcattggaatt-tcct-----ga-----t--------ag-gagt-gtc---t-t--tt-a-tttt
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        21080 22 -     24430 a-ccattggaatt-tctt-----gaatga--------------------------------------
i Xerus_inauris.XerIna_scaffold_48378                    I 6 I 26
s Zalophus_californianus.ZalCal_flattened_line_17732          2543 40 +     86975 --ttttaggaatt-tcct-----gagtga-t--------ag-gagt-gtc---t-t--tc-a-tttt
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519  0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188  0 +      1777 C
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      11935  1 +     63895 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383  9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   2809  0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 70244  0 +    116680 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186890  0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8272963  1 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Galagoides_demidoff.k141_31856                              3354  0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            61949  0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11664308 436 + 224834208 I
e Condylura_cristata.JH655891.1                           17547132  5 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            171068  0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15969  0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            5641  0 -      6351 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     66596  1 -     89534 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       3077  8 +     62944 t--cat-----aa----ta
s Acinonyx_jubatus.LLWD01001279.1                           824718  8 -   1699592 t--ggt-----ta----ta
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507962  8 -  29979442 t--ggt-----aa----tg
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             76745  8 -    347723 t--gat-----aa----tg
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   11007  8 -     52922 t--cat-----aa----ta
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         10941  8 -     28001 t--cat-----aa----ta
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          1387  8 -     18505 t--cat-----aa----ta
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           2236  8 -     12518 t--cat-----aa----ta
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_2038611                             23414  8 +     24414 t--tgt-----ga----TA
i Alouatta_belzebul.k141_2038611                         C 0 C 0
s Alouatta_caraya.k141_885645                                54175  8 +     54689 t--tgt-----ga----TA
i Alouatta_caraya.k141_885645                            C 0 C 0
s Alouatta_discolor.k141_2852575                            124764  8 +    125349 t--tgt-----ga----TA
i Alouatta_discolor.k141_2852575                         C 0 C 0
s Alouatta_juara.k141_1509701                                21109  8 +     25266 T--TGT-----GA----TA
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                            551  8 +      2906 t--tgt-----ga----TA
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            14664  8 -     18578 t--tgt-----ga----TA
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_668256                              17368  8 +     18088 t--tgt-----ga----TA
i Alouatta_palliata.k141_668256                          C 0 C 0
s Alouatta_puruensis.k141_1766044                            18419  8 -     18677 T--TGT-----GA----TA
i Alouatta_puruensis.k141_1766044                        C 0 C 0
s Alouatta_seniculus.k141_117119                             11401  8 +     50774 T--TGT-----GA----TA
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  12031  8 -     33861 t--cat-----ga----ta
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            12052  8 -     34016 t--cat-----ga----ta
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4294447  8 -   5030052 T--CAT-----GA----TA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             12053  8 -     34685 t--cat-----ga----ta
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               25174  8 -     47192 t--cat-----ga----ta
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       8618  6 +     20879 t--t-------at----tt
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        16262  8 +     17124 t--caa-----aa----tg
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Avahi_laniger.k141_765380                                  50658  8 -     92717 t--gac-----aa----tg
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              51287  8 +     85213 t--gac-----aa----tg
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             1783  8 -     10423 t--cat-----ga----ta
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             21275  8 +     31915 T--CCT-----GA----TA
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            1750  8 +      5267 t--cat-----ga----ta
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23586962  8 - 189096842 T--CAT-----GA----TA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              8494  8 -     12001 t--cat-----ga----ta
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                            9999838  8 -  17673402 t--cac-----aa----tg
i Camelus_bactrianus.KN276810.1                          I 2 C 0
s Camelus_dromedarius.KN272107.1                           2332302  8 -   7040546 t--cac-----aa----tg
i Camelus_dromedarius.KN272107.1                         I 2 C 0
s Camelus_ferus.KB017975.1                                  400578  8 -   1652518 t--cac-----aa----tg
i Camelus_ferus.KB017975.1                               I 2 C 0
s CanFam4.chr16                                           17796707  8 -  60362399 t--ggt-----aa----tg
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182764  8 -    185531 t--ggt-----aa----tg
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9032150  8 -   9314153 t--ggt-----aa----tg
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17956415  8 -  59632846 t--ggt-----aa----tg
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18497715  8 +  63665305 t--ggt-----aa----tg
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           142389 15 -    496798 tttaagtgagaaa----tc
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    135102  3 +    179628 t--ca--------------
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 1
s Catagonus_wagneri.CatWag_scaffold_2839                     90206  8 +    217609 T--CAC-----AA----TG
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          6403  8 -     11392 t--cat-----ga----ta
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               2501  8 -      7577 t--cat-----ga----ta
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         6300 13 -      8605 t--aagtgagaaa----tc
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12228826  8 +  27778364 t--tat-----aa----tg
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          3544  8 -      3715 t--tat-----aa----tg
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4471966  8 +   4669795 T--CAT-----AA----TA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        10514  8 -     19203 t--cat-----aa----ta
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           4936  8 +      8260 t--cat-----aa----ta
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           5163  8 +     27781 t--cat-----aa----ta
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         5318  8 -     20310 t--cat-----aa----ta
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           8302  8 +     29689 t--cat-----aa----ta
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            2730  8 +      9989 t--cat-----aa----ta
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          10979  8 -     27936 t--cat-----aa----ta
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                            11009  8 -     11289 t--cat-----aa----ta
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38813384  8 +  39242232 t--cat-----aa----ta
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21219080  8 -  21565898 t--cat-----aa----ta
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       36199  8 -     53127 t--cat-----aa----ta
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        3485  8 +      7159 t--cat-----aa----ta
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       11002  8 -     27947 t--cat-----aa----ta
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         10978  8 +     17596 t--cat-----aa----ta
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                           200  8 +     26000 t--cat-----aa----ta
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             18080  8 -     52598 t--ctt-----aa----tg
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           13429  8 +     57038 t--ctt-----aa----tg
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           7420  8 +     11226 t--cat-----ga----ta
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18424940  8 -  18827391 t--cat-----aa----ta
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       11381  8 -     50209 t--cat-----aa----ta
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135418387  8 + 135778131 T--CAT-----AA----TA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1906901  8 +   2368649 T--CAT-----AA----TA
i Colobus_angolensis.KN981557.1                          I 15 C 0
s Colobus_guereza.LG01                                   199946573  8 + 200372422 t--cat-----aa----ta
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              33445  8 +     84244 t--cat-----aa----ta
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          11458  7 -     20389 ---cat-----aa----tg
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 47288  8 +     63868 t--cct-----at----tg
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_287352              1420  8 +      4208 T--TTG-----AA----AG
i Crocidura_indochinensis.CroInd_scaffold_287352         I 74 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             25882  8 -     87169 t--ggt-----ac----ta
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12534256  8 -  12879189 t--cat-----aa----tg
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  670678  8 +   1390856 t--tat-----aa----tg
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    3434  8 +    198055 t--tat-----aa----tg
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE759718.1                                   8349  8 +     11740 T--TAT-----AA----TG
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          16811  8 -    110024 t--cat-----at----tg
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01109367.1                            2864  8 -      6299 t--cat-----ag----tg
i Ellobius_talpinus.LOJH01109367.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16326726  8 -  41312741 t--ggt-----aa----tg
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1280718  8 +   4378816 t--tac-----aa----tg
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18528539  8 -  39960074 t--tac-----aa----tg
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               30554  8 +    498745 t--tac-----aa----tg
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21201582  8 -  21539334 t--cat-----aa----ta
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              10763  8 -     14127 t--ctt-----aa----tg
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                3461  8 -     16928 t--ctt-----aa----tg
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              12494  8 -     25546 t--ctt-----aa----tg
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             9679  8 +     26330 t--ctt-----aa----tg
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 10935  8 +     23973 t--ctt-----aa----tg
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 9679  8 +     75513 t--ctt-----aa----tg
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  7630  8 +     97555 t--ctt-----aa----tg
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            10558  8 +     26496 t--ctt-----aa----tg
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  1163  8 -     17153 t--ctt-----aa----tg
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              10739  8 +    111500 t--ctt-----aa----tg
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20234583  8 + 206538554 t--ggt-----ta----ta
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20193428  8 + 205367284 t--agt-----ta----ta
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  6940  8 -     36744 t--ggt-----ta----ta
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_266699               1228  8 +      2098 t--cat-----aa----tg
i Galeopterus_variegatus.GalVar_scaffold_266699          C 0 C 0
s Gorilla_beringei.k141_3596273                              12312  8 -     32273 t--cat-----aa----ta
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186334460  8 + 186649187 t--cat-----aa----ta
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   31526  8 +     78134 t--tgt-----ac----tg
i Graphiurus_murinus.GraMur_scaffold_10447               I 18 C 0
s Hapalemur_alaotrensis.k141_170648                           3820  8 -     19426 t--ctt-----aa----tg
i Hapalemur_alaotrensis.k141_170648                      I 37 I 1
s Hapalemur_gilberti.k141_488810                              8964  8 -     15286 t--ctt-----aa----tg
i Hapalemur_gilberti.k141_488810                         I 37 C 0
s Hapalemur_griseus.k141_1511508                             10602  8 +     18253 t--ctt-----aa----tg
i Hapalemur_griseus.k141_1511508                         I 37 C 0
s Hapalemur_meridionalis.k141_248335                         10705  8 -     41752 t--ctt-----aa----tg
i Hapalemur_meridionalis.k141_248335                     I 37 C 0
s Hapalemur_occidentalis.k141_907772                         10538  8 -     16460 t--ctt-----aa----tg
i Hapalemur_occidentalis.k141_907772                     I 37 I 1
s Helogale_parvula.HelPar_flattened_line_2585               239710  8 +    327341 t--ggt-----ac----ta
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       109211  8 +   1711038 t--cat-----aa----tg
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 400
s Hipposideros_galeritus.HipGal_scaffold_29171               40645  8 +     43066 t--cat-----aa----tg
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 I 390
s Hoolock_leuconedys.ctg274                                    431155  8 +    630532 t--cat-----aa----ta
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  41869  8 +     55795 t--agt-----aa----ta
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_307679                               14088  8 -     15490 t--cat-----aa----ta
i Hylobates_agilis.k141_307679                           I 8 C 0
s Hylobates_klossii.k141_282416                              56094  8 +     67168 t--cat-----aa----ta
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189539744  8 - 191637585 t--cat-----aa----ta
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3332637  8 -  11177569 t--cat-----aa----ta
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7516669  8 -   7955117 t--tat-----at----tg
i Ictidomys_tridecemlineatus.JH393364.1                  I 26 C 0
s Indri_indri.k141_3655594                                   19520  8 +     31101 t--ctt-----aa----gg
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15521067  8 -  30322482 t--ctt-----aa----tg
i Lemur_catta.scaffold_24                                I 15 C 0
s Leontocebus_fuscicollis.k141_1820339                        4189  8 +     64341 t--cat-----ga----ta
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           1249  8 +      4941 t--cat-----ga----ta
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4117  8 +     35603 t--cat-----ga----ta
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    25546  8 +     38576 t--cat-----ga----ta
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         22243  8 +     66356 t--cat-----TG----TA
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          7958 12 -     23766 t--cat-----aatgagtg
i Lepilemur_ankaranensis.k141_596936                     I 9 C 0
s Lepilemur_dorsalis.k141_577674                             25905 12 +     45836 t--cat-----aatgagtg
i Lepilemur_dorsalis.k141_577674                         I 9 C 0
s Lepilemur_ruficaudatus.k141_320948                           188 12 -      1719 t--cat-----aatgagtg
i Lepilemur_ruficaudatus.k141_320948                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      23960 12 +     54090 t--cat-----aatgagtg
i Lepilemur_septentrionalis.k141_185316                  I 9 C 0
s Leptonychotes_weddellii.KB714746.1                       3039870  8 +   3914936 t--ggt-----aa----tg
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                              1433512  8 +   1826925 t--cat-----aa----ta
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            2487  8 +     11245 t--caa-----aa----tg
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1001324  8 +   6120653 t--caa-----aa----tg
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17952655  8 -  59628241 t--ggt-----aa----tg
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               3333  8 +     40492 t--cat-----aa----ta
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59672587  8 +  60120075 t--cat-----aa----ta
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  9089  8 -     26193 t--cat-----aa----ta
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            76885  8 -    114318 t--cat-----aa----ta
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  2600  8 -     23192 t--cat-----aa----ta
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                12052  8 -     29190 t--cat-----aa----ta
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  20620  8 +     37952 t--cat-----aa----ta
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186835708  8 + 187317192 T--CAT-----AA----TA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25454271  8 -  25927173 t--cat-----aa----ta
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  76469  8 +     89720 t--cat-----aa----ta
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 3466  8 +     20474 t--cat-----aa----ta
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   3268  8 -     14993 t--cat-----aa----ta
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  326138  8 -    668171 t--cat-----aa----ta
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 1570  8 -     24072 t--cat-----aa----ta
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               22207  8 -     45290 t--cat-----aa----ta
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88438  8 +     94391 t--tat-----aa----ta
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 1
s Mandrillus_leucophaeus.scaffold280                      23933755  8 -  24302211 t--cat-----aa----ta
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               347931  8 +    752769 t--cat-----aa----ta
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              16877  8 +    737560 t--tat-----aa----tt
i Manis_javanica.JSZB01003497.1                          I 3 C 0
s Manis_pentadactyla.KN006162.1                              48262  8 -    317179 t--tat-----aa----tg
i Manis_pentadactyla.KN006162.1                          I 3 C 0
s Marmota_marmota.CZRN01000018.1                          33098981  8 -  40650429 t--tat-----at----tg
i Marmota_marmota.CZRN01000018.1                         I 26 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         7748  8 -    207569 t--cat-----ta----tg
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              7433  8 +     13704 t--ggt-----aa----tg
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 29177  8 +    140813 t--cat-----ac----tg
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12179705  8 -  29670104 t--cat-----at----tg
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                2329  8 -      7380 t--cat-----ga----ta
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               1399  8 +     18990 t--cat-----ga----ta
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      2334  8 -      7356 t--cat-----ga----ta
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18288453  8 -  93316391 t--ctt-----AA----TG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11256964  8 -  27267610 t--cat-----at----tg
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miopithecus_ogouensis.k141_534055                           5508  8 -     28506 t--cat-----aa----ta
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         2707  8 -      8324 t--ggt-----aa----tg
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      6023  8 -     37649 t--ctt-----aa----tg
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138781  1 -    366855 ------------------g
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   32819  8 +     37127 t--ggt-----ac----ta
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Mus_caroli.LT608237.1                                   84358279  8 - 120012414 t--cat-----at----tg
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87647267  8 - 129401213 t--cat-----at----tg
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31351552  8 -  89631738 t--cat-----at----tg
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90749346  8 - 130317789 t--cat-----at----tg
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              3785  8 +     14296 t--tgt-----ac----tg
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               298615  8 -  14710649 t--ggt-----aa----tg
i Mustela_putorius.JH418006.1                            C 0 C 0
s Nasalis_larvatus.k141_413338                               11505  8 +     21681 t--cat-----aa----ta
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    757326  8 +    783361 t--cct-----aa----tg
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146916  8 -   9404916 t--ggt-----aa----tg
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102576307  8 - 196305487 t--caa-----aa----tg
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             3993  8 +      8486 t--caa-----aa----tg
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105746734  8 + 199412804 t--caa-----aa----tg
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1359449  8 +   3988456 t--aat-----at----gg
i Ochotona_princeps.JH802162.1                           I 220 C 0
s Odobenus_rosmarus.KB229312.1                              504013  8 -   2017862 t--ggt-----aa----tg
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   21060  8 +     28053 T--CAT-----AT----TG
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    76500  8 +    102263 t--cat-----at----tg
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       459670  8 -    559221 t--ggt-----aa----tg
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Pan_paniscus.KQ411613.1                                    40429  8 +     80009 t--cat-----aa----ta
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189139321  8 + 189151597 t--cat-----aa----ta
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  148592  8 +    230217 t--gct-----ta----ta
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                261799  8 +  18783137 t--gct-----ta----ta
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4718435  8 -   8748460 t--gct-----ta----ta
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183439541  8 + 183742232 T--CAT-----AA----TA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             3234  8 +     20448 t--cat-----aa----ta
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20560039  8 +  20919399 t--cat-----aa----ta
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   1977  8 +     41871 t--cat-----aa----ta
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     5263  8 +     27711 t--cat-----aa----ta
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  5343  8 +      9205 t--cat-----aa----ta
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10053  8 -     78924 c--agt-----aa----ta
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            6495  8 +     13100 t--caa-----aa----tg
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             4868  8 +     25941 t--caa-----aa----tg
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18191099  8 -  18517816 t--cat-----at----tg
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Piliocolobus_badius.k141_1234363                           40017  8 +     62158 t--cat-----aa----ta
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        34739  8 +     89929 t--cat-----aa----ta
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            36155  8 +     51399 t--cat-----aa----ta
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14292393  8 -  14605196 T--CAT-----AA----TA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189127470  8 + 189387572 T--CAT-----AA----TA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9567078  8 +   9816681 t--cat-----aa----ta
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               69667  8 -     81375 t--cat-----aa----ca
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              1487  8 +     19060 t--cat-----aa----ca
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2593718  8 -   4620579 T--CTT-----AA----TG
i Prolemur_simus.MPIZ01000396.1                          I 37 C 0
s Propithecus_coquerelli.NW_012148875.1                     987717  8 +   2598838 T--CAT-----AA----TG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          26021  8 +     38485 t--cat-----aa----tg
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             2180  8 +      4256 t--cat-----aa----tg
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          23540  8 +     35766 t--cat-----aa----tg
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           1722  8 -     24134 t--cat-----aa----tg
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        25535  8 -     67325 t--cat-----aa----tg
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           1780  8 -      6182 t--cat-----aa----tg
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             6828  8 -     21651 t--cat-----at----tg
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            12176  8 -     21811 t--cat-----aa----tg
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         37633  8 +     42204 t--ggt-----aa----tg
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22974619  8 +  28871421 T--TAT-----AA----TG
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1357709  8 +   4952924 T--TAT-----AA----TG
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20271715  8 -  38429054 t--ggt-----ta----ta
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             11498  8 -     91421 t--cat-----aa----ta
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7605626  8 +   7812017 t--cat-----aa----ta
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11474  8 -     72585 t--cat-----aa----ta
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53567365  8 +  90668790 c--cat-----at----tg
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             3182  8 -     11128 t--cat-----aa----ta
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91232537  8 - 195417433 T--CAT-----AA----TA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7668186  8 +   7961872 t--cat-----aa----ta
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85618  2 -     96226 -----------------TG
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               4445  8 -      8359 t--cat-----ga----ta
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            10754  8 -     13588 t--cat-----ga----ta
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              4390  8 -      6207 t--cat-----ga----ta
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               10117  8 +     13640 t--cat-----ga----ta
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               4980  8 +      8564 t--cat-----ga----ta
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209465258  8 + 209938924 t--cat-----ga----ta
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 4470  8 -      9399 t--cat-----ga----ta
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 1619  8 +      3421 t--cat-----ga----ta
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119947818  8 - 121099817 T--CAT-----GA----TA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       20285  8 +     46362 t--cat-----ga----TA
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               20380  8 +     45824 t--cat-----ga----ta
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             36995  8 -     64574 t--cat-----ga----ta
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                                  1  8 -     23631 T--CAT-----GA----TA
i Saimiri_sciureus.k141_2278166                          N 0 C 0
s Saimiri_ustus.k141_1484609                                 20273  8 -     61129 t--cat-----ga----ta
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          16010  8 -     19888 t--cat-----aa----ta
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      23212  8 +     39453 t--cat-----aa----ta
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            3738  8 +     27826 t--cat-----aa----ta
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             3259  8 -     19483 t--cat-----aa----ta
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      3321  8 +      7198 t--cat-----aa----ta
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         11581  8 +     15514 t--cat-----aa----ta
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    10519  8 -     12148 T--CAT-----AT----TG
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            188636  8 -    191337 t--cac-----aa----tg
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1949753  8 -   3870691 t--tat-----at----tg
i Spermophilus_dauricus.KZ294078.1                       I 26 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             28149  8 +     97271 t--ggt-----aa----tg
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              15716  8 -    196729 t--ggt-----ac----ta
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.JH118708.1                                      32700  8 -     47482 c--cac-----aa----tg
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1089786  8 -   1523678 t--cat-----aa----ta
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 8113  8 +     41958 t--cat-----aa----tg
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      116161  8 -    156842 t--tat-----aa----tg
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    384611  8 +    539355 t--tat-----aa----tg
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               12029 13 +     70052 t--aagtgagaaa----tc
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               16334 13 +     25099 t--aagtgagaaa----tc
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186424907  8 + 186847797 T--CAT-----AA----TA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          7312  8 -     20410 t--cat-----aa----ta
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    11507  8 +     15221 t--cat-----aa----ta
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        7413  8 +     19930 t--cat-----aa----ta
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       3843  8 -     19997 t--cat-----aa----ta
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            43962  8 -     60166 t--cat-----aa----ta
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        11433  8 -     27529 t--cat-----aa----ta
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     11375  8 -     18194 t--cat-----aa----ta
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           5110  8 -     21137 t--cat-----aa----ta
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    3813  8 -     10723 t--cat-----aa----ta
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         2965  8 +      9834 t--cat-----aa----ta
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        21284  8 +     32220 t--cat-----aa----ta
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5935380  8 +   6242583 t--cat-----aa----ta
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        4627  8 +     20839 t--cat-----aa----ta
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Ursus_maritimus.KK499267.1                               4847878  8 -   5085361 t--ggt-----aa----tg
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   8401  8 +     50397 t--ctt-----aa----tg
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              8456  8 +     24756 t--ctt-----aa----tg
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5369339  8 -   5488506 t--cac-----aa----tg
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  8326  8 -     43706 t--ggt-----aa----tg
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        21128  8 -     24430 t--tat-----at----tg
i Xerus_inauris.XerIna_scaffold_48378                    I 26 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          2583  8 +     86975 t--ggt-----aa----tg
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519  0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188  0 +      1777 C
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      11935  1 +     63895 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383  9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     5205  0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2151898 10 +   4065304 I
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   2809  0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 70244  0 +    116680 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186890  0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8272963  1 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Galagoides_demidoff.k141_31856                              3354  0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            61949  0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11664308 436 + 224834208 I
e Condylura_cristata.JH655891.1                           17547132  5 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            171068  0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15969  0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            5641  0 -      6351 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     66596  1 -     89534 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     67587  6 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       3085 1 +     62944 a
s Acinonyx_jubatus.LLWD01001279.1                           824726 1 -   1699592 a
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507970 1 -  29979442 a
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             76753 1 -    347723 a
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   11015 1 -     52922 a
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         10949 1 -     28001 a
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          1395 1 -     18505 a
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           2244 1 -     12518 a
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_2038611                             23422 1 +     24414 A
i Alouatta_belzebul.k141_2038611                         C 0 C 0
s Alouatta_caraya.k141_885645                                54183 1 +     54689 A
i Alouatta_caraya.k141_885645                            C 0 C 0
s Alouatta_discolor.k141_2852575                            124772 1 +    125349 A
i Alouatta_discolor.k141_2852575                         C 0 C 0
s Alouatta_juara.k141_1509701                                21117 1 +     25266 A
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                            559 1 +      2906 A
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            14672 1 -     18578 A
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_668256                              17376 1 +     18088 A
i Alouatta_palliata.k141_668256                          C 0 C 0
s Alouatta_puruensis.k141_1766044                            18427 1 -     18677 A
i Alouatta_puruensis.k141_1766044                        C 0 C 0
s Alouatta_seniculus.k141_117119                             11409 1 +     50774 A
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  12039 1 -     33861 a
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            12060 1 -     34016 a
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4294455 1 -   5030052 A
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             12061 1 -     34685 a
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               25182 1 -     47192 a
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       8624 1 +     20879 a
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        16270 1 +     17124 a
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Avahi_laniger.k141_765380                                  50666 1 -     92717 a
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              51295 1 +     85213 a
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             1791 1 -     10423 a
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             21283 1 +     31915 A
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            1758 1 +      5267 a
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23586970 1 - 189096842 A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              8502 1 -     12001 a
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                            9999846 1 -  17673402 a
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2332310 1 -   7040546 a
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  400586 1 -   1652518 a
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17796715 1 -  60362399 a
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182772 1 -    185531 a
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9032158 1 -   9314153 a
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17956423 1 -  59632846 a
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18497723 1 +  63665305 a
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           142404 1 -    496798 a
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     90214 1 +    217609 A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          6411 1 -     11392 a
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               2509 1 -      7577 a
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         6313 1 -      8605 a
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12228834 1 +  27778364 a
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          3552 1 -      3715 a
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4471974 1 +   4669795 A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        10522 1 -     19203 a
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           4944 1 +      8260 a
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           5171 1 +     27781 a
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         5326 1 -     20310 a
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           8310 1 +     29689 a
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            2738 1 +      9989 a
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          10987 1 -     27936 a
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                            11017 1 -     11289 a
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38813392 1 +  39242232 a
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21219088 1 -  21565898 a
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       36207 1 -     53127 a
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        3493 1 +      7159 a
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       11010 1 -     27947 a
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         10986 1 +     17596 a
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                           208 1 +     26000 a
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             18088 1 -     52598 a
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           13437 1 +     57038 a
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           7428 1 +     11226 a
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18424948 1 -  18827391 a
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       11389 1 -     50209 a
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135418395 1 + 135778131 A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1906909 1 +   2368649 A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199946581 1 + 200372422 a
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              33453 1 +     84244 a
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          11465 1 -     20389 a
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 370
s Cricetomys_gambianus.CriGam_scaffold_18520                 47296 1 +     63868 a
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 12
s Crocidura_indochinensis.CroInd_scaffold_287352              1428 1 +      4208 A
i Crocidura_indochinensis.CroInd_scaffold_287352         C 0 I 186
s Cryptoprocta_ferox.CryFer_flattened_line_16129             25890 1 -     87169 a
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12534264 1 -  12879189 a
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  670686 1 +   1390856 a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    3442 1 +    198055 a
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE759718.1                                   8357 1 +     11740 A
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          16819 1 -    110024 a
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 11
s Ellobius_talpinus.LOJH01109367.1                            2872 1 -      6299 a
i Ellobius_talpinus.LOJH01109367.1                       C 0 I 12
s Enhydra_lutris.KZ291758.1                               16326734 1 -  41312741 a
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1280726 1 +   4378816 a
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18528547 1 -  39960074 a
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               30562 1 +    498745 a
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21201590 1 -  21539334 a
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              10771 1 -     14127 a
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                3469 1 -     16928 a
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              12502 1 -     25546 a
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             9687 1 +     26330 a
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 10943 1 +     23973 a
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 9687 1 +     75513 a
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  7638 1 +     97555 a
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            10566 1 +     26496 a
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  1171 1 -     17153 a
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              10747 1 +    111500 a
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20234591 1 + 206538554 a
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20193436 1 + 205367284 a
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  6948 1 -     36744 a
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_266699               1236 1 +      2098 a
i Galeopterus_variegatus.GalVar_scaffold_266699          C 0 I 37
s Gorilla_beringei.k141_3596273                              12320 1 -     32273 a
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186334468 1 + 186649187 a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   31534 1 +     78134 a
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_1720546                         42686 1 +     55949 a
i Hapalemur_alaotrensis.k141_1720546                     I 3 I 179
s Hapalemur_gilberti.k141_488810                              8972 1 -     15286 a
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             10610 1 +     18253 a
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         10713 1 -     41752 a
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_380049                         31477 1 -     62596 a
i Hapalemur_occidentalis.k141_380049                     I 3 I 179
s Helogale_parvula.HelPar_flattened_line_2585               239718 1 +    327341 a
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       109619 1 +   1711038 t
i Hipposideros_armiger.JXIK01000431.1                    I 400 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               41043 1 +     43066 t
i Hipposideros_galeritus.HipGal_scaffold_29171           I 390 C 0
s Hoolock_leuconedys.ctg274                                    431163 1 +    630532 a
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  41877 1 +     55795 a
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_307679                               14096 1 -     15490 a
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              56102 1 +     67168 a
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189539752 1 - 191637585 a
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3332645 1 -  11177569 a
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7516677 1 -   7955117 a
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   19528 1 +     31101 a
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15521075 1 -  30322482 a
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        4197 1 +     64341 a
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           1257 1 +      4941 a
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4125 1 +     35603 a
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    25554 1 +     38576 a
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         22251 1 +     66356 A
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          7970 1 -     23766 a
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             25917 1 +     45836 a
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_320948                           200 1 -      1719 a
i Lepilemur_ruficaudatus.k141_320948                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      23972 1 +     54090 a
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3039878 1 +   3914936 a
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                              1433520 1 +   1826925 a
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            2495 1 +     11245 a
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1001332 1 +   6120653 a
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17952663 1 -  59628241 a
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               3341 1 +     40492 a
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59672595 1 +  60120075 a
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  9097 1 -     26193 a
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            76893 1 -    114318 a
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  2608 1 -     23192 a
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                12060 1 -     29190 a
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  20628 1 +     37952 a
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186835716 1 + 187317192 A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25454279 1 -  25927173 a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  76477 1 +     89720 a
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 3474 1 +     20474 a
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   3276 1 -     14993 a
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  326146 1 -    668171 a
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 1578 1 -     24072 a
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               22215 1 -     45290 a
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88447 1 +     94391 a
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 1 C 0
s Mandrillus_leucophaeus.scaffold280                      23933763 1 -  24302211 a
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               347939 1 +    752769 a
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              16885 1 +    737560 a
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              48270 1 -    317179 a
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33098989 1 -  40650429 a
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         7756 1 -    207569 a
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 420
s Mellivora_capensis.MelCap_flattened_line_69365              7441 1 +     13704 a
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 29185 1 +    140813 a
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 12
s Mesocricetus_auratus.KB708134.1                         12179713 1 -  29670104 a
i Mesocricetus_auratus.KB708134.1                        C 0 I 11
s Mico_argentatus.k141_1239457                                2337 1 -      7380 a
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               1407 1 +     18990 a
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      2342 1 -      7356 a
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18288461 1 -  93316391 A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11256972 1 -  27267610 a
i Microtus_ochrogaster.CM001695.1                        C 0 I 12
s Miopithecus_ogouensis.k141_534055                           5516 1 -     28506 a
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         2715 1 -      8324 a
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      6031 1 -     37649 a
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138782 1 -    366855 a
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   32827 1 +     37127 a
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Mus_caroli.LT608237.1                                   84358287 1 - 120012414 a
i Mus_caroli.LT608237.1                                  C 0 I 12
s Mus_musculus.chr8                                       87647275 1 - 129401213 a
i Mus_musculus.chr8                                      C 0 I 12
s Mus_pahari.LT608297.1                                   31351560 1 -  89631738 a
i Mus_pahari.LT608297.1                                  C 0 I 12
s Mus_spretus.CM004101.1                                  90749354 1 - 130317789 a
i Mus_spretus.CM004101.1                                 C 0 I 12
s Muscardinus_avellanarius.MusAve_scaffold_82313              3793 1 +     14296 a
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               298623 1 -  14710649 a
i Mustela_putorius.JH418006.1                            C 0 C 0
s Nasalis_larvatus.k141_413338                               11513 1 +     21681 a
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    757334 1 +    783361 a
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146924 1 -   9404916 a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102576315 1 - 196305487 a
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             4001 1 +      8486 a
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105746742 1 + 199412804 a
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1359457 1 +   3988456 a
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              504021 1 -   2017862 a
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   21068 1 +     28053 A
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 11
s Onychomys_torridus.OnyTor_scaffold_2986                    76508 1 +    102263 a
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 12
s Otocyon_megalotis.JAEUCK010005147.1                       459678 1 -    559221 a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Pan_paniscus.KQ411613.1                                    40437 1 +     80009 a
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189139329 1 + 189151597 a
i Pan_troglodytes.CM009242.2                             C 0 I 36
s Panthera_onca.PanOnc_flattened_line_3271                  148600 1 +    230217 a
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                261807 1 +  18783137 a
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4718443 1 -   8748460 a
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183439549 1 + 183742232 A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             3242 1 +     20448 a
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20560047 1 +  20919399 a
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   1985 1 +     41871 a
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     5271 1 +     27711 a
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  5351 1 +      9205 a
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10061 1 -     78924 a
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            6503 1 +     13100 a
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             4876 1 +     25941 a
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18191107 1 -  18517816 a
i Peromyscus_maniculatus.KI615324.1                      C 0 I 12
s Piliocolobus_badius.k141_1234363                           40025 1 +     62158 a
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        34747 1 +     89929 a
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            36163 1 +     51399 a
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14292401 1 -  14605196 A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189127478 1 + 189387572 A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9567086 1 +   9816681 a
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               69675 1 -     81375 a
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              1495 1 +     19060 a
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2593726 1 -   4620579 A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     987725 1 +   2598838 A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          26029 1 +     38485 a
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             2188 1 +      4256 a
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          23548 1 +     35766 a
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           1730 1 -     24134 a
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        25543 1 -     67325 a
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           1788 1 -      6182 a
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             6836 1 -     21651 a
i Psammomys_obesus.NESX01036370.1                        C 0 I 12
s Pteronotus_parnellii.KE909381.1                            12184 1 -     21811 a
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         37641 1 +     42204 a
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22974627 1 +  28871421 A
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1357717 1 +   4952924 A
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20271723 1 -  38429054 a
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             11506 1 -     91421 a
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7605634 1 +   7812017 a
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11482 1 -     72585 a
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53567373 1 +  90668790 a
i Rattus_norvegicus.chr16                                C 0 I 8
s Rhinopithecus_bieti.k119_217274                             3190 1 -     11128 a
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91232545 1 - 195417433 A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7668194 1 +   7961872 a
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85620 1 -     96226 A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               4453 1 -      8359 a
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            10762 1 -     13588 a
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              4398 1 -      6207 a
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               10125 1 +     13640 a
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               4988 1 +      8564 a
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209465266 1 + 209938924 a
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 4478 1 -      9399 a
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 1627 1 +      3421 a
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119947826 1 - 121099817 A
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       20293 1 +     46362 A
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               20388 1 +     45824 a
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             37003 1 -     64574 a
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                                  9 1 -     23631 A
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 20281 1 -     61129 a
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          16018 1 -     19888 a
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      23220 1 +     39453 a
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            3746 1 +     27826 a
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             3267 1 -     19483 a
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      3329 1 +      7198 a
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         11589 1 +     15514 a
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    10527 1 -     12148 A
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 I 2
s Solenodon_paradoxus.SolPar_flattened_line_5840            188644 1 -    191337 a
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1949761 1 -   3870691 a
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             28157 1 +     97271 a
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              15724 1 -    196729 a
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.JH118708.1                                      32708 1 -     47482 a
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1089794 1 -   1523678 a
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 8121 1 +     41958 a
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      116169 1 -    156842 a
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    384619 1 +    539355 a
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               12042 1 +     70052 a
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               16347 1 +     25099 a
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186424915 1 + 186847797 A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          7320 1 -     20410 a
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    11515 1 +     15221 a
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        7421 1 +     19930 a
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       3851 1 -     19997 a
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            43970 1 -     60166 a
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        11441 1 -     27529 a
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     11383 1 -     18194 a
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           5118 1 -     21137 a
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    3821 1 -     10723 a
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         2973 1 +      9834 a
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        21292 1 +     32220 a
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5935388 1 +   6242583 a
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        4635 1 +     20839 a
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Ursus_maritimus.KK499267.1                               4847886 1 -   5085361 a
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   8409 1 +     50397 a
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              8464 1 +     24756 a
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5369347 1 -   5488506 a
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  8334 1 -     43706 a
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        21136 1 -     24430 a
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          2591 1 +     86975 a
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Sapajus_macrocephalus.k141_351809                          54316 0 -     80660 C
e Sapajus_apella.ctg103                                    5419275 0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519 0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188 0 +      1777 C
e Cebus_albifrons.Contig27                                25650611 0 +  26074798 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906 0 -     10935 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      11935 1 +     63895 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383 9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     5205 0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2151898 10 +   4065304 I
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553 7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   2809 0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937 0 +    114563 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 70244 0 +    116680 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10240 0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823 1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813 0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Oryctolagus_cuniculus.CM000791.1                        67144556 0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805 0 +       996 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186890 0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33016 1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456 1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390 1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692 1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520 1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686 0 +   8254450 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009 7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Loxodonta_africana.GL010049.1                            4214777 0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3712 0 -     14121 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8272963 1 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547 0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491 0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Galagoides_demidoff.k141_31856                              3354 0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447 1 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1089268 0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084 0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495 7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            61949 0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11664308 436 + 224834208 I
e Condylura_cristata.JH655891.1                           17547132 5 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            171068 0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15969 0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498 0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            5641 0 -      6351 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157 0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    135105 1 +    179628 I
e Carollia_perspicillata.CarPer_scaffold_92756                3465 7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102 7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691 7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     66596 1 -     89534 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     67587 6 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       3086 36 +     62944 gcc-cttt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
s Acinonyx_jubatus.LLWD01001279.1                           824727 37 -   1699592 acc-cc-t-tcaacaat---act-t------gag-----tt--tac------t--ga--------t----agcgaga
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 6
s Acomys_cahirinus.AcoCah_scaffold_12655                     67593 20 +     87051 ---------------------------------------ca-----------t--ac--cca-agttt--aaggaag
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 6 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9507971 36 -  29979442 g-c-cc-t-tcaaatat---act-t------gag-----tt--tac------t--ga--------t----agcgagg
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 6
s Ailurus_fulgens.LNAC01001112.1                             76754 37 -    347723 ggc-cc-t-tcaacaat---act-t------cag-----tt--tac------t--ga--------t----agcgagg
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 6
s Allenopithecus_nigroviridis.k141_3361533                   11016 36 -     52922 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         10950 36 -     28001 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          1396 36 -     18505 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aagaagg
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           2245 36 -     12518 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_2038611                             23423 36 +     24414 GCC-CCTT-TCAA-CAA---TAC-T------GAG-----TC-----------T--AA--------GTT--AAGAAGG
i Alouatta_belzebul.k141_2038611                         C 0 C 0
s Alouatta_caraya.k141_885645                                54184 36 +     54689 GCC-CCTT-TCAA-CAA---TAC-T------GAG-----TC-----------T--AA--------GTT--AAGAAGG
i Alouatta_caraya.k141_885645                            C 0 C 0
s Alouatta_discolor.k141_2852575                            124773 36 +    125349 GCC-CCTT-TCAA-CAA---TAC-T------GAG-----TC-----------T--AA--------GTT--AAGAAGG
i Alouatta_discolor.k141_2852575                         C 0 C 0
s Alouatta_juara.k141_1509701                                21118 36 +     25266 GCC-CCTT-TCAA-CAA---TAC-T------GAG-----TC-----------T--AA--------CTT--AAGAAGG
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                            560 36 +      2906 GCC-CCTT-TCAA-CAA---TAC-T------GAG-----TC-----------T--AA--------GTT--AAGAAGG
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            14673 36 -     18578 GCC-CCTT-CCAA-CAA---TAC-T------GAG-----TC-----------T--AA--------GTT--AAGAAGG
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_668256                              17377 36 +     18088 GCC-CCTT-TCAA-CAA---TAC-T------GAG-----TC-----------T--AA--------GTT--AAGAAGG
i Alouatta_palliata.k141_668256                          C 0 C 0
s Alouatta_puruensis.k141_1766044                            18428 36 -     18677 GCC-CCTT-TCAA-CAA---TAC-T------GAG-----TC-----------T--AA--------CTT--AAGAAGG
i Alouatta_puruensis.k141_1766044                        C 0 C 0
s Alouatta_seniculus.k141_117119                             11410 36 +     50774 GCC-CCTT-TCAA-CAA---TAC-T------GAG-----TC-----------T--AA--------CTT--AAGAAGG
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  12040 36 -     33861 gcc-cctt-tcaa-cac---tac-t------gag-----tc-----------t--ga--------gtt--aaggagg
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            12061 36 -     34016 gcc-cctt-tcaa-cac---tac-t------gag-----tc-----------t--aa--------gtt--aaggagg
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4294456 36 -   5030052 GCC-CCTT-TCCA-CAC---TAC-T------GAG-----TC-----------T--GA--------GTT--AAGGAGG
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             12062 36 -     34685 gcc-cctt-tcaa-cac---tac-t------gag-----tc-----------t--ga--------gtt--aaggagg
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               25183 36 -     47192 gcc-cctt-tcaa-cac---tac-t------gag-----tc-----------t--ga--------gtt--aaggagg
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       8625 22 +     20879 gcc-cctt-tcaatcag---ac-ct------gag-------------------------------------------
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 10
s Arctocebus_calabarensis.k141_288239                        16271  6 +     17124 ggc-agt----------------------------------------------------------------------
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Avahi_laniger.k141_765380                                  50667 36 -     92717 gcc-cctt-tcca-cac---ctc-t------gag-----tt-----------t--ac--------gct--aatgagg
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              51296 36 +     85213 gcc-cctt-tcca-cat---ctc-t------gag-----tt-----------t--ac--------gct--aatgagg
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             1792 36 -     10423 gcc-cctt-tcaa-cac---tac-t------gag-----tc-----------t--aa--------gtt--aagaagg
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             21284 36 +     31915 GCC-CCTT-TCAA-CAC---TAC-T------GAG-----TC-----------T--AA--------GTT--AAGAAGG
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            1759 36 +      5267 gcc-tctt-tcaa-cac---tac-t------gag-----tc-----------t--aa--------gtt--aagaagg
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23586971 36 - 189096842 GCC-TCTT-TCAA-CAC---TAC-T------GAG-----TC-----------T--AA--------GTT--AAGAAGG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              8503 36 -     12001 gcc-tctt-tcaa-cac---tac-t------gag-----tc-----------t--aa--------gtt--aagaagg
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                            9999847 17 -  17673402 ---------------------------------g-----gc-----------t--ga---ctc--a----agtgagc
i Camelus_bactrianus.KN276810.1                          C 0 I 6
s Camelus_dromedarius.KN272107.1                           2332311 17 -   7040546 ---------------------------------g-----gc-----------t--ga---ctc--a----agtgagc
i Camelus_dromedarius.KN272107.1                         C 0 I 6
s Camelus_ferus.KB017975.1                                  400587 17 -   1652518 ---------------------------------g-----gc-----------t--ga---ctc--a----agtgagc
i Camelus_ferus.KB017975.1                               C 0 I 6
s CanFam4.chr16                                           17796716 37 -  60362399 gcc-cc-t-tcaatgat---act-t------gag-----tt--tac------t--ga--------t----agcaagt
i CanFam4.chr16                                          C 0 I 6
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182773 37 -    185531 gcc-cc-t-tcaatgat---act-t------gag-----tt--tac------t--ga--------t----agcaagt
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 I 6
s Canis_lupus_dingo.QKWQ01000480.1                         9032159 37 -   9314153 gcc-cc-t-tcaatgat---act-t------gag-----tt--tac------t--ga--------t----agcaagt
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 6
s Canis_lupus_familiaris.chr16                            17956424 37 -  59632846 gcc-cc-t-tcaatgat---act-t------gag-----tt--tac------t--ga--------t----agcaagt
i Canis_lupus_familiaris.chr16                           C 0 I 6
s Canis_lupus_orion.HG994398.1                            18497724 37 +  63665305 gcc-cc-t-tcaatgat---act-t------gag-----tt--tac------t--ga--------t----agcaagt
i Canis_lupus_orion.HG994398.1                           C 0 I 6
s Carlito_syrichta.NW_007259797.1                           142405 41 -    496798 gga-ttta-ttga-gaa---gac-a------gaaaagttcc-----------c--at--------agC--AGGAGGG
i Carlito_syrichta.NW_007259797.1                        C 0 I 32
s Castor_canadensis.CasCan_scaffold_2074                    135106 15 +    179628 ----------cca---t---ac-ct------gag-----tt-----------t--a---------------------
i Castor_canadensis.CasCan_scaffold_2074                 I 1 I 4
s Catagonus_wagneri.CatWag_scaffold_2839                     90215  1 +    217609 ---------------------------------C-------------------------------------------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          6412 36 -     11392 gcc-cctt-tcaa-cac---tac-t------gag-----tc-----------t--aa--------gtt--aagaagg
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               2510 36 -      7577 gcc-cctt-tcaa-cac---tac-t------gag-----ta-----------t--aa--------gtt--aagaagg
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         6314 41 -      8605 ggA-ttta-ttga-gaa---gac-a------gaaaagctcc-----------c--at--------agc--aggaggg
i Cephalopachus_bancanus.k141_2037105                    C 0 I 32
s Ceratotherium_simum.JH767749.1                          12228835 35 +  27778364 gat-cc-t-tcaaccat---act-t------gag-----t---ta-------c--aa--------t----agtgagg
i Ceratotherium_simum.JH767749.1                         C 0 I 6
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          3553 35 -      3715 gac-cc-t-tcaaccat---act-t------gag-----t---ta-------c--aa--------t----agtgagg
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 I 6
s Cercocebus_atys.KQ010504.1                               4471975 36 +   4669795 GCC-ATTT-TCAA-CAA---Tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        10523 36 -     19203 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           4945 36 +      8260 gcc-attt-tcaa-caa---tat-t------gag-----tc-----------t--at--------gtt--aaggagg
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           5172 36 +     27781 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         5327 36 -     20310 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           8311 36 +     29689 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            2739 36 +      9989 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          10988 36 -     27936 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                            11018 36 -     11289 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38813393 36 +  39242232 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21219089 36 -  21565898 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       36208 36 -     53127 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        3494 36 +      7159 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       11011 36 -     27947 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         10987 36 +     17596 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                           209 36 +     26000 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             18089 36 -     52598 gcc-cctt-tcca-ctc---acc-t------gag-----tt-----------t--ac--------act--aatgagg
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           13438 36 +     57038 gcc-cctt-tcca-ctc---acc-a------gag-----tt-----------t--ac--------act--aatgagg
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           7429 36 +     11226 gcc-cctt-tcaa-cac---tac-t------gag-----tc-----------t--aa--------gtt--aagaagg
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18424949 36 -  18827391 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       11390 36 -     50209 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135418396 36 + 135778131 GCC-ATTT-TCAA-CAA---TAC-t------gag-----tc-----------t--at--------gtt--aaggagg
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1906910 36 +   2368649 GCC-ATTT-TCAA-CAA---TAc-t------gag-----tc-----------t--at--------gtt--aaggagg
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199946582 36 + 200372422 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              33454 36 +     84244 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Colobus_polykomos.k141_906115                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 47309 20 +     63868 ---------------------------------------ta-----------t--acctg-a-g-ctt--aAGGAGG
i Cricetomys_gambianus.CriGam_scaffold_18520             I 12 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          11836  1 -     20389 t----------------------------------------------------------------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 370 C 0
s Crocidura_indochinensis.CroInd_scaffold_283822              3735 34 +      4330 ACA-ct-t-ttagccac---tac-t------ggg-----tc-----------t--ga--------g--aatgagg--
i Crocidura_indochinensis.CroInd_scaffold_283822         I 846 n 186
s Cryptoprocta_ferox.CryFer_flattened_line_16129             25891 37 -     87169 act-cc-t-tcattagc---acg-t------gag-----tt--tac------t--ga--------t----agtgagg
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 6
s Daubentonia_madagascariensis.ctg71                      12534265 35 -  12879189 gcc-cttt-ccac-tgc---acc-t------gag-----tt-----------t--ac--------acc--aatgag-
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  670687 36 +   1390856 gac-cc-t-tcaaccat---act-t------gag-----tt--ta-------c--aa--------t----agtgagg
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 6
s Diceros_bicornis.DicBicMic_scaffold_5955                    3443 36 +    198055 gac-cc-t-tcaaccat---act-t------gag-----tt--ta-------c--aa--------t----agtgagg
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 6
s Ellobius_lutescens.LOEQ01008920.1                          16831 20 -    110024 ---------------------------------------ca-----------t--acctg-a-g-ttt--aaggaga
i Ellobius_lutescens.LOEQ01008920.1                      I 11 C 0
s Ellobius_talpinus.LOJH01109367.1                            2885 20 -      6299 ---------------------------------------ca-----------t--acctg-a-g-ttt--aaggaga
i Ellobius_talpinus.LOJH01109367.1                       I 12 C 0
s Eidolon_helvum.KE759718.1                                   8358 16 +     11740 CCT-CC-T-TCAATCAT---AT-------------------------------------------------------
i Eidolon_helvum.KE759718.1                              C 0 I 9
s Enhydra_lutris.KZ291758.1                               16326735 37 -  41312741 ggc-cc-t-tcagcaat---act-t------gag-----tt--tac------t--ga--------t----agcgcgg
i Enhydra_lutris.KZ291758.1                              C 0 I 6
s Equus_asinus.JREZ01000139.1                              1280727 36 +   4378816 gtc-cc-g-tcaactat---acc-t------gag-----tt--ta-------t--ga--------t----agtgaag
i Equus_asinus.JREZ01000139.1                            C 0 I 6
s Equus_caballus.CM000403.2                               18528548 36 -  39960074 gtc-cc-g-tcaactat---acc-t------gag-----tt--ta-------c--ga--------t----agtgaag
i Equus_caballus.CM000403.2                              C 0 I 6
s Equus_przewalskii.KK951119.1                               30563 36 +    498745 gtc-cc-g-tcaactat---acc-t------gag-----tt--ta-------c--ga--------t----agtgaag
i Equus_przewalskii.KK951119.1                           C 0 I 6
s Erythrocebus_patas.Contig38                             21201591 36 -  21539334 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              10772 36 -     14127 gcc-cctt-tcca-cac---acc-t------gag-----ct-----------t--ac--------gct--aatgagg
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                3470 36 -     16928 gcc-cctt-tcca-cac---acc-t------gag-----ct-----------t--ac--------gct--aatgagg
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              12503 36 -     25546 gcc-cctt-tcca-cac---acc-t------gag-----ct-----------t--ac--------gct--aatgagg
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             9688 36 +     26330 gcc-cctt-tcca-cac---acc-t------gag-----ct-----------t--ac--------gct--aatgagg
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 10944 26 +     23973 gcc-cctt-tcca-cac---acc-t------gag-----ct-----------t--ac--------------------
i Eulemur_fulvus.k141_544389                             C 0 I 2
s Eulemur_macaco.k141_1562045                                 9688 36 +     75513 gcc-cctt-tcca-cac---acc-t------gag-----ct-----------t--ac--------gct--aatgagg
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  7639 36 +     97555 gcc-cctt-tcca-cac---acc-t------gag-----ct-----------t--ac--------gct--aatgagg
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            10567 36 +     26496 gcc-cctt-tcca-cac---acc-t------gag-----ct-----------t--ac--------gct--aatgagg
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  1172 36 -     17153 gcc-cctt-tcca-cac---acc-t------gag-----ct-----------t--ac--------gct--aatgagg
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              10748 36 +    111500 gcc-cctt-tcca-cac---acc-t------gag-----ct-----------t--ac--------gct--aatgagg
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20234592 37 + 206538554 acc-cc-t-tcaacaat---act-t------gag-----tt--tac------t--ga--------t----agcgaga
i Felis_catus.CM001381.2                                 C 0 I 6
s Felis_catus_fca126.CM031415.1                           20193437 37 + 205367284 acc-cc-t-tcaacaat---act-t------gag-----tt--tac------t--ga--------t----agcgaga
i Felis_catus_fca126.CM031415.1                          C 0 I 6
s Felis_nigripes.FelNig_flattened_line_20823                  6949 37 -     36744 acc-cc-t-tcaacaat---act-t------gag-----tt--tac------t--ga--------t----agcgaga
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 6
s Galeopterus_variegatus.GalVar_scaffold_197845                993 37 -      3123 gct-cctt-tcaatcat---acc-t------gag-----tg-----------t--at--------gct--aatgagg
i Galeopterus_variegatus.GalVar_scaffold_197845          I 88 I 181
s Gorilla_beringei.k141_3596273                              12321 36 -     32273 gcc-cttt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gat--aaggagg
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186334469 36 + 186649187 gcc-cctt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gct--aaggagg
i Gorilla_gorilla.LT578341.1                             C 0 I 139
s Graphiurus_murinus.GraMur_scaffold_10447                   31535 42 +     78134 gcc-cctttccaa---ccatac-ct------aag-----tt-----------t--aa-tgg--g-ttt--aatgaga
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           3829 36 -     19426 gac-ccgt-tcca-cac---acc-t------gag-----ct-----------t--at--------gct--aatgagg
i Hapalemur_alaotrensis.k141_170648                      I 1 C 0
s Hapalemur_gilberti.k141_488810                              8973 36 -     15286 gac-ccgt-tcca-cac---acc-t------gag-----ct-----------t--at--------gct--aatgagg
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             10611 36 +     18253 gac-ccgt-tcca-cac---acc-t------gag-----ct-----------t--at--------gct--aatgagg
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         10714 36 -     41752 gac-ccgt-tcca-cac---acc-t------gag-----ct-----------t--at--------gct--aatgagg
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         10547 36 -     16460 gac-ccgt-tcca-cac---acc-t------gag-----ct-----------t--at--------gct--aatgagg
i Hapalemur_occidentalis.k141_907772                     I 1 C 0
s Helogale_parvula.HelPar_flattened_line_2585               239719 37 +    327341 ccc-cc-t-tcaataac---aca-c------gag-----tt--ta-t-----g--ga--------t----aacgagg
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 6
s Hipposideros_armiger.JXIK01000431.1                       109620  1 +   1711038 t----------------------------------------------------------------------------
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               41044  1 +     43066 t----------------------------------------------------------------------------
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    431164 36 +    630532 gcc-cttt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  41878 37 +     55795 acc-tc-t-tcaacaat---atg-t------gac-----tt--tac------t--ga--------t----agtgatg
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 6
s Hylobates_agilis.k141_307679                               14097 36 -     15490 gcc-cttt-ccaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              56103 36 +     67168 gcc-cttt-ccaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189539753 36 - 191637585 gcc-cttt-ccaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3332646 36 -  11177569 gcc-cttt-ccaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7516678 41 -   7955117 gcc-cctt-tcaatcat---ac-ct------gag-----tt-----------t--aa-tg-a-g-ttt--aacgaga
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   19529 34 +     31101 gcc-ccct-tc---cac---acc-t------gaa-----tt-----------t--ac--------gct--aatgagg
i Indri_indri.k141_3655594                               C 0 I 25
s Lemur_catta.scaffold_24                                 15521076 36 -  30322482 gcc-gcgt-tcca-cac---acc-t------gag-----ct-----------t--at--------gct--aatgagg
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        4198 36 +     64341 gcc-cctt-tcaa-cac---tac-t------gag-----tc-----------t--aa--------gtt--aagaagg
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           1258 36 +      4941 gcc-cctt-tcaa-cac---tac-t------gag-----tc-----------t--aa--------gtt--aagaagg
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4126 36 +     35603 gcc-cctt-tcaa-cac---tac-t------gag-----tc-----------t--aa--------gtt--aagaagg
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    25555 36 +     38576 gcc-cctt-tcaa-cac---tac-t------gag-----tc-----------t--aa--------gtt--aagaagg
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         22252 36 +     66356 GCC-CATT-CCAA-CAC---TAC-T------GAG-----TC-----------T--AA--------GTT--AAGAAGG
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          7971 36 -     23766 gcc-cctt-ttca-caa---atc-t------gaa-----tt-----------t--at--------act--aatgaga
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             25918 36 +     45836 gcc-cctt-ttta-caa---atc-t------gaa-----tt-----------t--at--------act--aatgaga
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_320948                           201 36 -      1719 gcc-cctt-ttca-caa---atc-t------gag-----tt-----------t--ac--------act--aatgaga
i Lepilemur_ruficaudatus.k141_320948                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      23973 36 +     54090 gcc-cctt-ttca-caa---atc-t------gaa-----tt-----------t--at--------act--aatgaga
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3039879 36 +   3914936 ggc-cc-t-tcaacaat---act-t------gag-----tt--tac------t--ga--------t----agcgag-
i Leptonychotes_weddellii.KB714746.1                     C 0 I 6
s Lophocebus_aterrimus.ctg367                              1433521 36 +   1826925 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            2496  6 +     11245 ggc-agt----------------------------------------------------------------------
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1001333  6 +   6120653 ggc-agt----------------------------------------------------------------------
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17952664 37 -  59628241 gcc-cc-t-tcaatgat---act-t------gag-----tt--tac------t--ga--------t----agcaagt
i Lycaon_pictus.CM007581.1                               C 0 I 6
s Macaca_arctoides.k141_2326796                               3342 36 +     40492 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--gt--------gtt--aaggagg
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59672596 36 +  60120075 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  9098 36 -     26193 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            76894 36 -    114318 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  2609 36 -     23192 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                12061 36 -     29190 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  20629 36 +     37952 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186835717 36 + 187317192 GCC-ATTT-TCAA-CAA---TAC-T------GAG-----tc-----------t--at--------gtt--aaggagg
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25454280 36 -  25927173 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  76478 36 +     89720 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 3475 36 +     20474 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   3277 36 -     14993 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  326147 36 -    668171 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggaga
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 1579 36 -     24072 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               22216 36 -     45290 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88448  7 +     94391 tgt-cc-t-t-------------------------------------------------------------------
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 4
s Mandrillus_leucophaeus.scaffold280                      23933764 36 -  24302211 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               347940 36 +    752769 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              16886 36 +    737560 gtc-tc-t-tcaaccat---act-t------gag-----tt--ta-------t--ga--------t----agtaaag
i Manis_javanica.JSZB01003497.1                          C 0 I 6
s Manis_pentadactyla.KN006162.1                              48271 36 -    317179 gtc-tc-t-tcaaccat---act-t------gag-----tt--ta-------t--ga--------t----agtgaag
i Manis_pentadactyla.KN006162.1                          C 0 I 6
s Marmota_marmota.CZRN01000018.1                          33098990 41 -  40650429 gcc-cctt-tcaatcat---ac-ct------gag-----tt-----------t--aa-tg-a-g-ttt--aaggaga
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         8177  1 -    207569 c----------------------------------------------------------------------------
i Megaderma_lyra.MegLyr_scaffold_4542                    I 420 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              7442 37 +     13704 ggc-cc-t-tcaacaat---act-t------gaa-----tt--tac------t--ga--------c----agcgaga
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 6
s Meriones_unguiculatus.MerUng_scaffold_7390                 29198 20 +    140813 ---------------------------------------ca-----------t--acctg-a-g-ctt--aaggaaa
i Meriones_unguiculatus.MerUng_scaffold_7390             I 12 C 0
s Mesocricetus_auratus.KB708134.1                         12179725 20 -  29670104 ---------------------------------------ca-----------t--ccctg-a-g-ctc--aaggaga
i Mesocricetus_auratus.KB708134.1                        I 11 C 0
s Mico_argentatus.k141_1239457                                2338 36 -      7380 gcc-cctt-tcaa-cat---tac-t------gag-----tc-----------t--aa--------gta--gagaagg
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               1408 36 +     18990 gcc-cctt-tcaa-cac---tac-t------gag-----tc-----------t--aa--------gtt--aagaagg
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      2343 36 -      7356 gcc-cctt-tcaa-cat---tac-t------gag-----tc-----------t--aa--------gta--gagaagg
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18288462 36 -  93316391 CCC-CCTT-TCCA-CTC---ACC-T------GAG-----TT-----------T--AC--------GCT--CATGAGG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11256985 20 -  27267610 ---------------------------------------ca-----------t--acctg-a-g-ctt--aaggaga
i Microtus_ochrogaster.CM001695.1                        I 12 C 0
s Miopithecus_ogouensis.k141_534055                           5517 36 -     28506 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         2716 36 -      8324 ggc-cc-t-tcaacaat---act-t------gag-----tt--tac------t--ga--------t----agcgag-
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 6
s Mirza_zaza.k141_952172                                      6032 36 -     37649 gcc-cctt-tcca-ctt---acc-t------gag-----tt-----------t--ac--------gct--catgagg
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138783 36 -    366855 ccc-cc-t-tcaaccac---acc-t------gag-----ta-----------tagga--------t----agtgagg
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 6
s Mungos_mungo.MunMun_flattened_line_23663                   32828 37 +     37127 acc-cc-t-tcaagaac---aca-t------gag-----tt--ta-t-----g--ga--------t----aacgagg
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 6
s Mus_caroli.LT608237.1                                   84358300 20 - 120012414 ---------------------------------------ca-----------t--ac-caga-g-ctt--aaggaga
i Mus_caroli.LT608237.1                                  I 12 C 0
s Mus_musculus.chr8                                       87647288 20 - 129401213 ---------------------------------------ca-----------t--ac-caga-g-ctt--aaggaga
i Mus_musculus.chr8                                      I 12 C 0
s Mus_pahari.LT608297.1                                   31351573 20 -  89631738 ---------------------------------------ca-----------t--acctg-a-g-ctt--aaggaga
i Mus_pahari.LT608297.1                                  I 12 C 0
s Mus_spretus.CM004101.1                                  90749367 20 - 130317789 ---------------------------------------ca-----------t--ac---cacagctt--aaggaga
i Mus_spretus.CM004101.1                                 I 12 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              3794 38 +     14296 gcc-tctt-ccaa---c---ac-ct------gag-----tt-----------t--at-tgg--g-ttt--catgaga
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               298624 37 -  14710649 ggc-cc-t-tcagcaat---act-t------gag-----tt--tac------t--ga--------t----agcgagg
i Mustela_putorius.JH418006.1                            C 0 I 6
s Nasalis_larvatus.k141_413338                               11514 36 +     21681 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    757335 36 +    783361 tcc-cc-t-tcaaccat---agc-t------gag-----tt-----------taggg--------t----agtgcag
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 6
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146925 37 -   9404916 gcc-cc-t-tcaatgat---act-t------gag-----tt--tac------t--ga--------t----agcaagt
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 6
s Nycticebus_bengalensis.LG01                            102576316  6 - 196305487 ggt-agt----------------------------------------------------------------------
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             4002  6 +      8486 ggt-agt----------------------------------------------------------------------
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105746743  6 + 199412804 ggc-agt----------------------------------------------------------------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1359458 49 +   3988456 agc-tctc-taaatccc---act-tcttagaggt-----tt-----------t--aa-tggaca-ttt--aatgaga
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              504022 36 -   2017862 ggc-cc-t-tcaacaat---act-t------gag-----tt--tac------t--ga--------t----agtgag-
i Odobenus_rosmarus.KB229312.1                           C 0 I 6
s Ondatra_zibethicus.OndZib_scaffold_46174                   21080 20 +     28053 ---------------------------------------CA-----------T--AC--CTGAG-CTT--AAGGAGA
i Ondatra_zibethicus.OndZib_scaffold_46174               I 11 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    76521 20 +    102263 ---------------------------------------ca-----------t--acctg-a-g-ctt--aaggaga
i Onychomys_torridus.OnyTor_scaffold_2986                I 12 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       459679 37 -    559221 gcc-ca-t-tccatgat---act-t------gag-----tt--tac------t--ga--------t----agcaagt
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 6
s Pan_paniscus.KQ411613.1                                    40438 36 +     80009 gcc-cttt-tcAA-CAA---TAC-T------GAG-----Tc-----------t--at--------gtt--aaggagg
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.KZ622849.1                                 18616 36 +    110857 gcc-cttt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Pan_troglodytes.KZ622849.1                             I 544 I 100
s Panthera_onca.PanOnc_flattened_line_3271                  148601 37 +    230217 acc-cc-t-tcaacaat---act-t------gag-----tt--tac------t--ga--------t----agtgaaa
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 6
s Panthera_pardus.KV860321.1                                261808 37 +  18783137 acc-cc-t-tcaacaat---act-t------gag-----tt--tac------t--ga--------t----agtgaaa
i Panthera_pardus.KV860321.1                             C 0 I 6
s Panthera_tigris.KE722367.1                               4718444 37 -   8748460 acc-cc-t-tcaacaat---act-t------gag-----tt--tac------t--ga--------t----agtgaaa
i Panthera_tigris.KE722367.1                             C 0 I 6
s Papio_anubis.CM001495.2                                183439550 36 + 183742232 GCC-ATTT-TCAA-CAA---TAC-T------GAG-----tc-----------t--at--------gtt--aaggagg
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             3243 36 +     20448 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20560048 36 +  20919399 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   1986 36 +     41871 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     5272 36 +     27711 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  5352 36 +      9205 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10062 37 -     78924 atc-cc-t-tcaacaat---act-t------gag-----tt--ta---a---t--ga--------t----agcaagg
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 6
s Peromyscus_maniculatus.KI615324.1                       18191120 20 -  18517816 ---------------------------------------ca-----------c--acctg-a-g-ctt--aaggaga
i Peromyscus_maniculatus.KI615324.1                      I 12 C 0
s Perodicticus_ibeanus.k141_855320                            6504  6 +     13100 ggc-agt----------------------------------------------------------------------
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             4877  6 +     25941 ggc-agt----------------------------------------------------------------------
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Piliocolobus_badius.k141_1234363                           40026 36 +     62158 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        34748 36 +     89929 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            36164 36 +     51399 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14292402 36 -  14605196 GCC-ATTT-TCAA-CAA---TAc-t------gag-----tc-----------t--at--------gtt--aaggagg
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189127479 20 + 189387572 GCC-CTTT-TCAA-CAA---TAC-T------GA--------------------------------------------
i Pongo_abelii.CM009266.2                                C 0 I 10
s Pongo_pygmaeus.ctg66                                     9567087 20 +   9816681 gcc-cttt-tcaa-caa---tac-t------ga--------------------------------------------
i Pongo_pygmaeus.ctg66                                   C 0 I 10
s Presbytis_comata.k141_677006                               69676 36 -     81375 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              1496 36 +     19060 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2593727 36 -   4620579 GCC-CCGT-TCCA-CAC---ACC-T------GAG-----CT-----------T--AT--------ACT--AATGAGG
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     987726 36 +   2598838 GCC-CCTT-TCCA-CAC---CTC-T------GAG-----TT-----------T--AC--------GCT--AATGAGG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          26030 36 +     38485 gcc-cctt-tcca-cac---ctc-t------gag-----tt-----------t--ac--------gct--aatgagg
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             2189 36 +      4256 gcc-cctt-tcca-cac---ctc-t------gag-----tt-----------t--ac--------gct--aatgagg
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          23549 36 +     35766 gcc-cctt-tcca-cac---ctc-t------gag-----tt-----------t--ac--------gct--aatgagg
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           1731 36 -     24134 gcc-cctt-tcca-cac---ctc-t------aag-----tt-----------t--at--------gct--aatgagg
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        25544 36 -     67325 gcc-cctt-tcca-cac---ctc-t------gag-----tt-----------t--ac--------gct--aatgagg
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           1789 36 -      6182 gcc-cctt-tcca-cac---ctc-t------gag-----tt-----------t--ac--------gct--aatgagg
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             6849 20 -     21651 ---------------------------------------ca-----------t--acctg-a-g-ctt--aaggaaa
i Psammomys_obesus.NESX01036370.1                        I 12 C 0
s Pteronotus_parnellii.KE909381.1                            12185 36 -     21811 ccc-cc-t-tcaaccac---acc-t------gag-----tt-----------tagga--------t----agtgagg
i Pteronotus_parnellii.KE909381.1                        C 0 I 6
s Pteronura_brasiliensis.PteBra_flattened_line_31117         37642 37 +     42204 ggc-cc-t-tcagcaat---act-t------gag-----tt--tac------t--ga--------t----agcgagg
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 6
s Pteropus_alecto.KB030862.1                              22974628 16 +  28871421 CCT-CC-T-TCAACCAT---AC-------------------------------------------------------
i Pteropus_alecto.KB030862.1                             C 0 I 14
s Pteropus_vampyrus.KN525825.1                             1357718 16 +   4952924 CCT-CC-T-TCAACCAT---AC-------------------------------------------------------
i Pteropus_vampyrus.KN525825.1                           C 0 I 14
s Puma_concolor.QAVW01001104.1                            20271724 37 -  38429054 acc-cc-t-tcaacaat---act-t------gag-----tt--tac------t--ga--------t----agcgaga
i Puma_concolor.QAVW01001104.1                           C 0 I 6
s Pygathrix_cinerea.k141_1153803                             11507 36 -     91421 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7605635 36 +   7812017 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11483 36 -     72585 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53567382 20 +  90668790 ---------------------------------------ca-----------t--ac--cta-agctt--aaggaga
i Rattus_norvegicus.chr16                                I 8 C 0
s Rhinopithecus_bieti.k119_217274                             3191 36 -     11128 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91232546 36 - 195417433 GCC-ATTT-TCAA-CAA---TAc-t------gag-----tc-----------t--at--------gtt--aaggagg
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7668195 36 +   7961872 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85621 16 -     96226 CCT-CC-T-GCAACTGT---AC-------------------------------------------------------
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 14
s Saguinus_bicolor.k141_2619299                               4454 36 -      8359 gcc-cctt-tcaa-cac---tac-t------gag-----tc-----------t--aa--------gtt--aagaagg
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            10763 36 -     13588 gcc-cctt-tcaa-cac---tac-t------gag-----tc-----------t--aa--------gtt--aagaagg
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              4399 36 -      6207 gcc-cctt-tcaa-cac---tac-t------gag-----tc-----------t--aa--------gtt--aagaagg
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               10126 36 +     13640 gcc-cctt-tcaa-cac---tac-t------gag-----tc-----------t--aa--------gta--aagaagg
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               4989 36 +      8564 gcc-cctt-tcaa-cac---tac-t------gag-----tc-----------t--aa--------gtt--aagaagg
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209465267 36 + 209938924 gcc-cctt-tcaa-cac---tac-t------gag-----tc-----------t--aa--------gtt--aagaagg
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 4479 36 -      9399 gcc-cctt-tcaa-cac---tac-t------gag-----tc-----------t--aa--------gtt--aagaagg
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 1628 36 +      3421 gcc-cctt-tcaa-cac---tac-t------gag-----tc-----------t--aa--------gtt--aagaagg
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119947827 36 - 121099817 GCC-CCGT-TCAA-CAC---TGC-T------GAG-----TC-----------T--AA--------GTT--AAGGAGG
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       20294 36 +     46362 GCC-CCAT-TCAA-CAC---TGC-T------GAG-----TC-----------T--AA--------GTT--AAGGAGG
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               20389 36 +     45824 gcc-ccgt-tcaa-cac---tgc-t------gag-----tc-----------t--aa--------gtt--agggagg
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             37004 36 -     64574 gcc-ccgt-tcaa-cac---tgc-t------gag-----tc-----------t--aa--------gtt--aaggagg
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                                 10 36 -     23631 GCC-CCGT-TCAA-CAC---TGC-T------GAG-----TC-----------T--AA--------GTT--AAGGAGG
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 20282 36 -     61129 gcc-ccgt-tcaa-cac---tgc-t------gag-----tc-----------t--aa--------gtt--aaggagg
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          16019 36 -     19888 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      23221 36 +     39453 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            3747 36 +     27826 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             3268 36 -     19483 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      3330 36 +      7198 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         11590 36 +     15514 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    10530 12 -     12148 GCC-CCTT-TCAT---C------------------------------------------------------------
i Sigmodon_hispidus.SigHis_scaffold_60841                I 2 I 20
s Solenodon_paradoxus.SolPar_flattened_line_5840            188645 36 -    191337 gac-tt-t-tcagctac---acc-t------gag-----tt-----------t--aa--------g--atagtggtt
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 I 6
s Spermophilus_dauricus.KZ294078.1                         1949762 41 -   3870691 gcc-cctt-tcaatcat---ac-ct------gag-----tt-----------t--aa-cg-a-g-ttt--aatgaga
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             28158 45 +     97271 ggc-cc-t-tcaacaat---act-t------gag-----ttgatactgatact--aa--------t----agtgagg
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 6
s Suricata_suricatta.SurSur_flattened_line_6629              15725 37 -    196729 acc-cc-t-tcaataac---aca-t------gag-----tt--ta-t-----g--ga--------t----aatgaag
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 6
s Sus_scrofa.JH118708.1                                      32709  1 -     47482 ---------------------------------c-------------------------------------------
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1089795 36 -   1523678 gcc-cttt-ccaa-caa---tac-t------gag-----tc-----------t--at--------gct--aaggagg
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 8122 35 +     41958 ccc-cc-t-tcaaccat---ac--t------gag-----tt-----------tagga--------t----agtgagg
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 8
s Tapirus_indicus.TapInd_scaffold_9301                      116170 35 -    156842 g-c-cc-c-tcaaccat---act-t------gag-----tt--ta-------t--gg--------t----agtgagg
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 6
s Tapirus_terrestris.TapTer_scaffold_755                    384620 35 +    539355 g-c-cc-t-tcaaccat---act-t------gag-----tt--ta-------t--gg--------t----agtgagg
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 6
s Tarsius_lariang.k141_2201908                               12043 41 +     70052 gga-ttta-ttga-gaa---gac-a------gaaaagctcc-----------c--at--------aGC--AGgaggg
i Tarsius_lariang.k141_2201908                           C 0 I 32
s Tarsius_wallacei.k141_780063                               16348 41 +     25099 gga-ttta-ttga-gaa---gac-a------gaaaagctcc-----------c--at--------agc--aggaggg
i Tarsius_wallacei.k141_780063                           C 0 I 32
s Theropithecus_gelada.CM009954.1                        186424916 36 + 186847797 GCC-ATTT-TCAA-CAA---TAC-T------GAG-----tc-----------t--gt--------gtt--aaggagg
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          7321 36 -     20410 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    11516 36 +     15221 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        7422 36 +     19930 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       3852 36 -     19997 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            43971 36 -     60166 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggaag
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        11442 36 -     27529 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     11384 36 -     18194 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           5119 36 -     21137 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    3822 36 -     10723 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         2974 36 +      9834 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        21293 36 +     32220 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5935389 36 +   6242583 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggagg
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        4636 36 +     20839 gcc-attt-tcaa-caa---tac-t------gag-----tc-----------t--at--------gtt--aaggaag
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2151908 17 +   4065304 -------------------------------ccg-----tc-----------c--a---------tct--aacaaag
i Tupaia_chinensis.KB320699.1                            I 10 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     5205 29 -     10553 ---------tcaatcat---atc-t------cca-----tc-----------c--a---------tct--aatgaag
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4847887 37 -   5085361 gcc-cc-t-tcaaaaat---act-t------gag-----tt--tac------t--ga--------t----agcgagg
i Ursus_maritimus.KK499267.1                             C 0 I 6
s Varecia_rubra.k141_590885                                   8410 36 +     50397 gcc-cctt-tcca-cac---acc-t------gag-----ct-----------t--ac--------gct--aatgagg
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              8465 36 +     24756 gcc-cctt-tcca-cac---acc-t------gag-----ct-----------t--ac--------gct--aatgagg
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5369348 17 -   5488506 ---------------------------------g-----gc-----------t--ga---ctc--a----agtgagc
i Vicugna_pacos.KN270157.1                               C 0 I 6
s Vulpes_lagopus.VulLag_flattened_line_30954                  8335 37 -     43706 gcc-cc-t-tcaatgat---act-t------gag-----tt--tac------t--ga--------t----agcaagt
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 6
s Xerus_inauris.XerIna_scaffold_48378                        21137 41 -     24430 gcc-cttt-tcaatcat---ac-ct------gaa-----tt-----------t--aa-tg-a-g-ttt--aatgagg
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          2592 36 +     86975 ggc-cc-t-tcaacaat---act-t------gag-----tt--tac------t--ga--------t----agtgag-
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 6
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519  0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188  0 +      1777 C
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      11935  1 +     63895 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383  9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   2809  0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 70244  0 +    116680 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186890  0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8272963  1 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Galagoides_demidoff.k141_31856                              3354  0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            61949  0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11664308 436 + 224834208 I
e Condylura_cristata.JH655891.1                           17547132  5 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            171068  0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15969  0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            5641  0 -      6351 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     66596  1 -     89534 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       3122 54 +     62944 tgactcttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
s Acinonyx_jubatus.LLWD01001279.1                           824770 48 -   1699592 ------------------g----------a--gc-t-ggg-tccct---------aggt----atct-tcg--------ggatg-ggg-g--c-t----ggttg---------------cca-gagg---c
i Acinonyx_jubatus.LLWD01001279.1                        I 6 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     67613 50 +     87051 tgagtattattggg-g-ct----------a---------------t---------agat----agct-tca--------ggatggg-a-g--c-t----gagtg---------------cca--t------
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 6
s Ailuropoda_melanoleuca.LNAT01000098.1                    9508013 47 -  29979442 ------------------g----------a--gt-t-ggg-ccctc---------agat----gtct-tca---------gatg-gtg-g--c-t----agttg---------------tca-gaag---a
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 6 C 0
s Ailurus_fulgens.LNAC01001112.1                             76797 48 -    347723 ------------------a----------a--gt-t-ggg-cccct---------agat----gtct-tca--------ggatg-gtg-g--c-t----ggttg---------------cca-gaag---a
i Ailurus_fulgens.LNAC01001112.1                         I 6 C 0
s Allenopithecus_nigroviridis.k141_3361533                   11052 54 -     52922 tgactgttgctg-ggc-cc----------c---------------c---------agat----ggat-tca--------tgata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         10986 54 -     28001 tgactgttgctg-ggc-cc----------c---------------c---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          1432 54 -     18505 tgactgttgctg-ggc-cc----------c---------------c---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           2281 54 -     12518 tgactgttgctg-ggc-cc----------c---------------c---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_2038611                             23459 22 +     24414 TGACTCTTGCTG-GGC-CC----------C---------------t---------aga-------------------------------------------------------------------------
i Alouatta_belzebul.k141_2038611                         C 0 C 0
s Alouatta_caraya.k141_885645                                54220 22 +     54689 TGACTCTTGCTG-GGC-CC----------C---------------t---------aga-------------------------------------------------------------------------
i Alouatta_caraya.k141_885645                            C 0 C 0
s Alouatta_discolor.k141_2852575                            124809 22 +    125349 TGACTCTTGCTG-GGC-CC----------C---------------t---------aga-------------------------------------------------------------------------
i Alouatta_discolor.k141_2852575                         C 0 C 0
s Alouatta_juara.k141_1509701                                21154 22 +     25266 TGACTCTTGCTG-GGC-CC----------C---------------t---------aga-------------------------------------------------------------------------
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                            596 22 +      2906 TGACTCTTGCTG-GGC-CC----------C---------------t---------aga-------------------------------------------------------------------------
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            14709 22 -     18578 TGACTCTTGCTG-GGC-CC----------C---------------t---------aga-------------------------------------------------------------------------
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_668256                              17413 22 +     18088 TGACTCTTGCTG-GGC-CC----------C---------------C---------aga-------------------------------------------------------------------------
i Alouatta_palliata.k141_668256                          C 0 C 0
s Alouatta_puruensis.k141_1766044                            18464 22 -     18677 TGACTCTTGCTG-GGC-CC----------C---------------t---------aga-------------------------------------------------------------------------
i Alouatta_puruensis.k141_1766044                        C 0 C 0
s Alouatta_seniculus.k141_117119                             11446 22 +     50774 TGACTCTTGCTG-GGC-CC----------C---------------t---------aga-------------------------------------------------------------------------
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  12076 22 -     33861 tgactcttgctg-ggc-cc----------c---------------t---------aga-------------------------------------------------------------------------
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            12097 22 -     34016 tgactcttgctg-ggc-cc----------c---------------t---------aga-------------------------------------------------------------------------
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4294492 22 -   5030052 TGACTCTTGCTG-GGC-CC----------C---------------T---------AGA-------------------------------------------------------------------------
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             12098 22 -     34685 tgactcttgctg-ggc-cc----------c---------------t---------aga-------------------------------------------------------------------------
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               25219 22 -     47192 tgactcttgctg-ggc-cc----------c---------------t---------aga-------------------------------------------------------------------------
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       8657 54 +     20879 taagtattgatggg-a-cc----------c---------------t---------agat----agct-tca--------agatg-g-g-g-aa-a----ggttg---------------cca-aagg---a
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 10 C 0
s Arctocebus_calabarensis.k141_288239                        16277 29 +     17124 --------------------------------------------------------------------------------gcta-g-g-gg-a-c----taggg-c--------tggtccca-gagg---a
i Arctocebus_calabarensis.k141_288239                    C 0 I 8
s Avahi_laniger.k141_765380                                  50703 54 -     92717 ggagtgctggtg-ggc-cc----------c---------------c---------agac----agct-tca--------ggatg-g-g-gg-c-t----ggtgg---------------cca-gagc---a
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              51332 54 +     85213 ggagtgctggtg-ggc-cc----------c---------------c---------agac----agct-tca--------ggatg-g-g-gg-c-t----ggtgg---------------cca-gagc---a
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             1828 22 -     10423 tgactcttgctg-ggc-cc----------c---------------t---------aga-------------------------------------------------------------------------
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             21320 22 +     31915 TGACTCTTGGTG-GGC-CC----------C---------------t---------aga-------------------------------------------------------------------------
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            1795 22 +      5267 tgactcttgctg-ggc-cc----------c---------------t---------aga-------------------------------------------------------------------------
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23587007 22 - 189096842 TGACTCTTGCTG-GGC-CC----------C---------------T---------AGA-------------------------------------------------------------------------
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              8539 22 -     12001 tgactcttgctg-ggc-cc----------c---------------t---------aga-------------------------------------------------------------------------
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                            9999870 40 -  17673402 -----------------------------at-gg-a-ggg-cccct---------aaat----atct-tca--------ggaaggg-a-g--c-t----ggtta---------------------------
i Camelus_bactrianus.KN276810.1                          I 6 C 0
s Camelus_dromedarius.KN272107.1                           2332334 40 -   7040546 -----------------------------at-gg-a-ggg-cccct---------aaat----atct-tca--------ggaaggg-a-g--c-t----ggtta---------------------------
i Camelus_dromedarius.KN272107.1                         I 6 C 0
s Camelus_ferus.KB017975.1                                  400610 40 -   1652518 -----------------------------at-gg-a-ggg-cccct---------aaat----atct-tca--------ggaaggg-a-g--c-t----ggtta---------------------------
i Camelus_ferus.KB017975.1                               I 6 C 0
s CanFam4.chr16                                           17796759 48 -  60362399 ------------------g----------at--t-t-ggg-cccct---------agat----gtct-tca--------ggatg-gtg-g--c-t----ggttg---------------cca-gaca---a
i CanFam4.chr16                                          I 6 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182816 48 -    185531 ------------------g----------at--t-t-ggg-cccct---------agat----gtct-tca--------ggatg-gtg-g--c-t----ggttg---------------cca-gaca---a
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 6 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9032202 48 -   9314153 ------------------g----------at--t-t-ggg-cccct---------agat----gtct-tca--------ggatg-gtg-g--c-t----ggttg---------------cca-gaca---a
i Canis_lupus_dingo.QKWQ01000480.1                       I 6 C 0
s Canis_lupus_familiaris.chr16                            17956467 48 -  59632846 ------------------g----------at--t-t-ggg-cccct---------agat----gtct-tca--------ggatg-gtg-g--c-t----ggttg---------------cca-gaca---a
i Canis_lupus_familiaris.chr16                           I 6 C 0
s Canis_lupus_orion.HG994398.1                            18497767 48 +  63665305 ------------------g----------at--t-t-ggg-cccct---------agat----gtct-tca--------ggatg-gtg-g--c-t----ggttg---------------cca-gata---a
i Canis_lupus_orion.HG994398.1                           I 6 C 0
s Carlito_syrichta.NW_007259797.1                           142478 86 -    496798 ttactcataatg-aac-cc----------t---------------tttcagtcttacct----gggt-ttgtgccaatgaggta-g-g-tg-t-t----ggtgggcccTTGGATAACTTCGA-GAGG---G
i Carlito_syrichta.NW_007259797.1                        I 32 I 4
s Castor_canadensis.CasCan_scaffold_2074                    135125 54 +    179628 tgaatattggtggt-c-cc----------c---------------g---------aaat----agct-tca--------agatg-g-g-g-gc-c----actta---------------ccag-aga---a
i Castor_canadensis.CasCan_scaffold_2074                 I 4 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     90216 22 +    217609 ----------------------------------------------------------------TAT-tca--------ggatg-g-g-a--gct----ggtta---------------------------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          6448 22 -     11392 tgactcttgctg-ggc-cc----------c---------------t---------aga-------------------------------------------------------------------------
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               2546 22 -      7577 tgactcttgctg-ggc-cc----------c---------------t---------ata-------------------------------------------------------------------------
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         6387 86 -      8605 ttactcataatg-aAC-CC----------T---------------TTTCAATCTTACCT----GGGt-ttatgccaatgaggta-c-g-tg-t-t----ggtggacccttggataacttcaa-gagg---g
i Cephalopachus_bancanus.k141_2037105                    I 32 I 4
s Ceratotherium_simum.JH767749.1                          12228876 47 +  27778364 ------------------a----------t--gg-t-gaa-tccct---------agat----atcaacca--------accaa-g-g-g--c-t----ggttg---------------c-a-gagg---a
i Ceratotherium_simum.JH767749.1                         I 6 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          3594 47 -      3715 ------------------a----------t--gg-t-gaa-tccct---------agat----atcaacca--------accaa-g-g-g--c-t----ggttg---------------c-a-gagg---a
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     I 6 C 0
s Cercocebus_atys.KQ010504.1                               4472011 54 +   4669795 tgactcttgctg-ggc-cc----------c---------------c---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        10559 54 -     19203 tgactcttgctg-ggc-cc----------c---------------c---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           4981 54 +      8260 tgactcttgctg-ggc-cc----------c---------------c---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           5208 54 +     27781 tgactcttgctg-ggc-cc----------c---------------c---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         5363 54 -     20310 tgactgttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           8347 54 +     29689 tgactgttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            2775 54 +      9989 tgactgttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          11024 54 -     27936 tgactgttgctt-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                            11054 54 -     11289 tgactgttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38813429 54 +  39242232 tgactgttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21219125 54 -  21565898 tgactgttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       36244 54 -     53127 tgactgttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        3530 54 +      7159 tgactgttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       11047 54 -     27947 tgactgttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         11023 54 +     17596 tgactgttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-c-gg-c-t----ggttg---------------cca-gagg---a
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                           245 54 +     26000 tgactgttgccg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             18125 52 -     52598 ggagtgctggtg-gac-ct----------c---------------c---------agac----agct-t----------ggatg-g-g-gg-c-t----ggtga---------------cca-gagc---a
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           13474 52 +     57038 ggagtgctggtg-gac-ct----------c---------------c---------agac----agct-t----------ggatg-g-g-gg-c-t----ggtga---------------cca-gagc---a
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           7465 22 +     11226 tgactcttgctg-ggc-cc----------c---------------t---------aga-------------------------------------------------------------------------
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18424985 54 -  18827391 tgactgttgctg-ggc-cc----------c---------------c---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       11426 54 -     50209 tgactgttgctg-ggc-cc----------c---------------c---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135418432 54 + 135778131 tgactgttgctg-ggc-cc----------c---------------c---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1906946 54 +   2368649 tgactgttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199946618 54 + 200372422 tgactgttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              33490 54 +     84244 tgactgttgctg-gga-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Colobus_polykomos.k141_906115                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 47329 49 +     63868 TGAGTACTAGTAGG-C-CC----------A---------------T---------AGAT----AGCT-TCA--------GGATG-G-A-G--T-T----GATTT---------------TCA--T------
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 6
s Crocidura_indochinensis.CroInd_scaffold_746348              1013 38 +      1526 ------------------a----------a---------------c---------agtc----atct-tca--------ggatg-g-g-g-ac-t----tgtca---------------gca-gagg---a
i Crocidura_indochinensis.CroInd_scaffold_746348         n 186 n 186
s Cryptoprocta_ferox.CryFer_flattened_line_16129             25934 49 -     87169 ------------------g----------a--gc-t-ggg-cccct---------acca----tcct-gaa--------ggttg-ggg-g--c-t----ggttg---------------ccaagagg---c
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 6 C 0
s Daubentonia_madagascariensis.ctg71                      12534300 54 -  12879189 gcagtgctggtg-ggg-ca----------g---------------c---------agac----agct-tca--------aaatg-g-g-gg-c-t----ggtgg---------------cca-gagg---a
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  670729 46 +   1390856 ------------------a----------t--gg-t-gga-tccct---------agat----atcaacca--------acc-g-g-g-g--c-t----ggttg---------------c-a-gagg---a
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 6 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    3485 47 +    198055 ------------------a----------t--gg-t-gga-tccct---------agat----atcaacca--------accag-g-g-g--c-t----ggttg---------------c-a-gagg---a
i Diceros_bicornis.DicBicMic_scaffold_5955               I 6 C 0
s Ellobius_lutescens.LOEQ01008920.1                          16851 41 -    110024 ctagtattaatgta-g-tt----------a---------------t---------agct----agct-tca--------gattggg-a-g--c-t------------------------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 4
s Ellobius_talpinus.LOJH01109367.1                            2905 41 -      6299 ctagtattaatgga-g-tc----------a---------------t---------agct----agct-tca--------gattggg-a-g--c-t------------------------------------
i Ellobius_talpinus.LOJH01109367.1                       C 0 I 4
s Enhydra_lutris.KZ291758.1                               16326778 47 -  41312741 ------------------g----------a--gt-t-gg--cccct---------agat----gtct-tca--------ggatg-gtg-g--c-t----ggatg---------------cca-gaag---a
i Enhydra_lutris.KZ291758.1                              I 6 C 0
s Equus_asinus.JREZ01000139.1                              1280769 48 +   4378816 ------------------a----------t--g--a-tggacccct---------agat----atcttcag--------gagag-g-g-t--c-t----ggctg---------------cca-gagg---a
i Equus_asinus.JREZ01000139.1                            I 6 C 0
s Equus_caballus.CM000403.2                               18528590 48 -  39960074 ------------------a----------t--g--a-tggacccct---------agat----atcttcag--------gagag-g-g-g--c-t----ggctg---------------cca-gagg---a
i Equus_caballus.CM000403.2                              I 6 C 0
s Equus_przewalskii.KK951119.1                               30605 48 +    498745 ------------------a----------t--g--a-tggacccct---------agat----atcttcag--------gagag-g-g-g--c-t----ggctg---------------cca-gagg---a
i Equus_przewalskii.KK951119.1                           I 6 C 0
s Erythrocebus_patas.Contig38                             21201627 54 -  21539334 tgactgttgctg-ggc-cc----------c---------------c---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              10808 54 -     14127 ggagtaatggtg-ggc-cc----------c---------------c---------agac----agct-tca--------ggatg-g-g-gg-c-t----ggtgg---------------cca-gagc---a
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                3506 54 -     16928 ggagtaatggtg-gtc-cc----------c---------------c---------agac----agct-tca--------ggatg-g-g-gg-c-t----ggtgg---------------cca-gagc---a
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              12539 54 -     25546 ggagtaatggtg-ggc-cc----------c---------------c---------agac----agct-tca--------ggatg-g-g-gg-c-t----ggtgg---------------cca-gagc---a
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             9724 54 +     26330 ggagtaatggtg-ggc-cc----------c---------------c---------agac----agct-tca--------ggatg-g-g-gg-c-t----ggtgg---------------cca-gagc---a
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 10972 54 +     23973 ggagtaatggtg-ggc-cc----------c---------------c---------agac----agct-tca--------ggatg-g-g-tg-c-t----ggtgg---------------cca-gagc---a
i Eulemur_fulvus.k141_544389                             I 2 C 0
s Eulemur_macaco.k141_1562045                                 9724 54 +     75513 ggagtaatggtg-ggt-cc----------c---------------c---------agac----agct-tca--------ggatg-g-g-gg-c-t----ggtgg---------------cca-gagc---a
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  7675 54 +     97555 ggagtaatggtg-ggc-cc----------c---------------c---------agac----agct-tca--------ggatg-g-g-gg-c-t----ggtgg---------------cca-gagc---a
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            10603 54 +     26496 ggagtaatggtg-ggc-cc----------c---------------c---------agac----agct-tca--------ggatg-g-g-gg-c-t----ggtgg---------------cca-gagc---a
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  1208 54 -     17153 ggagtaatggtg-ggc-cc----------c---------------c---------agac----agct-tca--------ggatg-g-g-gg-c-t----ggtgg---------------cca-gagc---a
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              10784 54 +    111500 ggagtaatggtg-ggc-cc----------c---------------c---------agac----agct-tca--------ggatg-g-g-gg-c-t----ggtgg---------------cca-gagc---a
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20234635 49 + 206538554 ------------------g----------a--gc-t-ggg-tccct---a-----aggt----atct-tcg--------ggatg-ggg-g--c-t----ggttg---------------tca-gagg---c
i Felis_catus.CM001381.2                                 I 6 C 0
s Felis_catus_fca126.CM031415.1                           20193480 48 + 205367284 ------------------g----------a--gc-t-ggg-tccct---------aggt----atct-tcg--------ggatg-ggg-g--c-t----ggttg---------------tca-gagg---c
i Felis_catus_fca126.CM031415.1                          I 6 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  6992 48 -     36744 ------------------g----------a--gc-t-ggg-tccct---------aggt----atct-tcg--------ggatg-ggg-g--c-t----ggttg---------------tca-gagg---c
i Felis_nigripes.FelNig_flattened_line_20823             I 6 C 0
s Galeopterus_variegatus.GalVar_scaffold_266699               1274 52 +      2098 tgagtattgatg-g-c-ca----------c---------------t---------agat----aact-tca--------agatg-g-t-g--c-t----ggttg---------------cca-gagg---a
i Galeopterus_variegatus.GalVar_scaffold_266699          I 37 C 0
s Gorilla_beringei.k141_3596273                              12357 54 -     32273 tgactcttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.CYUI03001814.1                             28866 54 -     31004 tgactcttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Gorilla_gorilla.CYUI03001814.1                         I 780 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   31577 54 +     78134 agagtatcagtggg-g-ca----------c---------------t---------acaa----agct-tca--------aggtg-g-g-g-ac-t----ggttg---------------ccag-agg---a
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           3865 54 -     19426 tgactgttggtg-ggc-cc----------c---------------c---------agac----agct-tca--------ggatg-g-g-ga-c-t----tgtga---------------cca-gagc---a
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              9009 54 -     15286 tgactgttggtg-ggc-cc----------c---------------c---------agac----agct-tca--------ggatg-g-g-gg-c-t----tgtgg---------------cca-gagc---a
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             10647 54 +     18253 tgactgttggtg-ggc-cc----------c---------------c---------agac----agct-tca--------ggatg-g-g-gg-c-t----tgtgg---------------cca-gagc---a
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         10750 54 -     41752 tgactgttggtg-ggc-cc----------c---------------c---------agac----agct-tca--------ggatg-g-g-gg-c-t----tgtgg---------------cca-gagc---a
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         10583 54 -     16460 tgactgttggtg-ggc-cc----------c---------------c---------agac----agct-tca--------ggatg-g-g-gg-c-t----tgtgg---------------cca-gagc---a
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               239762 48 +    327341 ------------------g----------a--gc-t-gga-ctcct---------acat----acct-tca--------ggatg-ggg-g--c-t----ggctg---------------cca-gagg---t
i Helogale_parvula.HelPar_flattened_line_2585            I 6 C 0
s Hoolock_leuconedys.ctg274                                    431200 54 +    630532 tgactcttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  41921 48 +     55795 ------------------g----------a--gc-g-ggg-cccct---------acat----acct-tca--------ggatg-ggg-g--c-t----ggttg---------------tca-gagt---t
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 6 C 0
s Hylobates_agilis.k141_307679                               14133 54 -     15490 tgactcttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              56139 54 +     67168 tgactcttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189539789 54 - 191637585 tgactcttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3332682 54 -  11177569 tgactcttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7516719 51 -   7955117 tg---atccatggg-g-cc----------c---------------a---------agat----agct-gaa--------agaca-g-a-g-ac-a----ggttg---------------cca-aagg---a
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   19588 23 +     31101 --------------------------------------------------------------------------------gatg-t-g-gg-t-t----ggtgg---------------cca-gagc---a
i Indri_indri.k141_3655594                               I 25 C 0
s Lemur_catta.scaffold_24                                 15521112 54 -  30322482 tgactgttggtg-ggc-cc----------c---------------c---------agac----agct-tca--------ggatg-g-g-gg-c-t----ggtag---------------cca-gagc---a
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        4234 22 +     64341 tgactcttgctg-ggc-cc----------c---------------t---------aga-------------------------------------------------------------------------
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           1294 22 +      4941 tgactcttgctg-ggc-cc----------c---------------t---------aga-------------------------------------------------------------------------
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4162 22 +     35603 tgactcttgctg-ggc-cc----------c---------------t---------aga-------------------------------------------------------------------------
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    25591 22 +     38576 tgactcttgctg-ggc-cc----------c---------------t---------aga-------------------------------------------------------------------------
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         22288 22 +     66356 TGACTCTTGCTG-GGC-CC----------C---------------t---------aga-------------------------------------------------------------------------
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          8007 54 -     23766 ggagtgctggtg-ggc-cc----------c---------------c---------agac----agct-tca--------ggatg-g-g-gg-c-t----ggtgg---------------cca-gagc---a
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             25954 54 +     45836 ggagtgctggtg-ggc-cc----------c---------------c---------agac----agct-tca--------ggatg-g-g-gg-c-t----ggtgg---------------cca-gagc---a
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_320948                           237 54 -      1719 ggagtgctagtg-ggc-cc----------c---------------c---------agcc----agct-tca--------ggatg-g-g-gg-c-t----ggtgg---------------cca-gagc---a
i Lepilemur_ruficaudatus.k141_320948                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      24009 54 +     54090 ggagtgctggtg-ggc-cc----------c---------------c---------agac----agct-tca--------ggatg-g-g-gg-c-t----ggtgg---------------cca-gagc---a
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3039921 36 +   3914936 ---------------------------------------------t---------agat----ttct-tca--------ggatg-gtg-g--c-a----ggttg---------------cca-g---aaga
i Leptonychotes_weddellii.KB714746.1                     I 6 C 0
s Lophocebus_aterrimus.ctg367                              1433557 54 +   1826925 tgactcttgctg-ggc-cc----------c---------------c---------agat----ggat-tca--------cgata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            2502 29 +     11245 --------------------------------------------------------------------------------gctg-g-g-gg-a-g----tgggg---------ttggtccca-gagg---a
i Loris_lydekkerianus.k141_2539221                       C 0 I 8
s Loris_tardigradus.ctg83                                  1001339 29 +   6120653 --------------------------------------------------------------------------------gctg-g-g-gg-a-a----tgggg---------ttggtccca-gagg---a
i Loris_tardigradus.ctg83                                C 0 I 8
s Lycaon_pictus.CM007581.1                                17952707 48 -  59628241 ------------------g----------at--t-t-ggg-cccct---------agat----gtct-tca--------ggatg-gtg-g--c-t----ggttg---------------gca-gaca---a
i Lycaon_pictus.CM007581.1                               I 6 C 0
s Macaca_arctoides.k141_2326796                               3378 54 +     40492 tgactcttgctg-ggc-cc----------c---------------c---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59672632 54 +  60120075 tgactcttgctg-ggc-cc----------c---------------c---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  9134 54 -     26193 tgactcttgctg-ggc-cc----------c---------------c---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            76930 54 -    114318 tgactcttgctg-ggc-cc----------c---------------c---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  2645 54 -     23192 taactcttgctg-ggc-cc----------c---------------c---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                12097 54 -     29190 tgactcttgctg-ggc-cc----------c---------------c---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  20665 54 +     37952 tgactcttgctg-ggc-cc----------c---------------c---------agat----ggat-tca--------gaaca-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186835753 54 + 187317192 tgactcttgctg-ggc-cc----------c---------------c---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25454316 54 -  25927173 tgactcttgctg-ggc-cc----------c---------------c---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  76514 54 +     89720 tgactcttgctg-ggc-cc----------c---------------c---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 3511 54 +     20474 tgactcttgctg-ggc-cc----------c---------------c---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   3313 54 -     14993 tgactcttgctg-ggc-cc----------c---------------c---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  326183 54 -    668171 tgactcttgctg-ggc-cc----------c---------------c---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 1615 54 -     24072 tgactcttgctg-ggc-cc----------c---------------c---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               22252 54 -     45290 tgactcttgctg-ggc-cc----------c---------------c---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23933800 54 -  24302211 tgactcttgctg-ggc-cc----------c---------------c---------agat----ggat-tca--------ggtta-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               347976 54 +    752769 tgactcttgctg-ggc-cc----------c---------------c---------agat----ggat-tca--------ggtta-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              16928 29 +    737560 ------------------a----------g--g--atggg-ccctt---------agaa----attt-tta--------ggaca-----------------------------------------------
i Manis_javanica.JSZB01003497.1                          I 6 I 17
s Manis_pentadactyla.KN006162.1                              48313 29 -    317179 ------------------a----------g--g--atggg-ccctt---------agat----attt-tta--------ggaca-----------------------------------------------
i Manis_pentadactyla.KN006162.1                          I 6 I 17
s Marmota_marmota.CZRN01000018.1                          33099031 51 -  40650429 tg---atccatggg-g-cc----------c---------------t---------agat----agct-gaa--------agaca-g-a-g-ac-a----ggttg---------------cca-aagg---a
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              7485 47 +     13704 ------------------g----------a--gt-t-gg--cccct---------agat----gtct-tca--------ggatg-gtg-g--c-t----ggatg---------------cca-gaag---a
i Mellivora_capensis.MelCap_flattened_line_69365         I 6 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 29218 50 +    140813 tgagtattagtggg-c-cc----------a---------------c---------agac----agct-tca--------gaatgga-a-a--c-t----tatcg---------------cca--t------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 6
s Mesocricetus_auratus.KB708134.1                         12179745 39 -  29670104 tta------gtgat-c-tc----------a---------------t---------agatatatagat-tca--------ggatggg-a-g--c-t------------------------------------
i Mesocricetus_auratus.KB708134.1                        C 0 I 15
s Mico_argentatus.k141_1239457                                2374 22 -      7380 tgactcttgctg-ggc-cc----------c---------------t---------aga-------------------------------------------------------------------------
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               1444 22 +     18990 tgactcttgctg-ggc-cc----------c---------------t---------aga-------------------------------------------------------------------------
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      2379 22 -      7356 tgactcttgctg-ggc-cc----------c---------------t---------aga-------------------------------------------------------------------------
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18288498 54 -  93316391 GGAGTGCTGGTG-GAC-CC----------C---------------C---------AGAC----AGCT-T--------CAGGATC-A-G-GG-T-T----GGTGG---------------CCA-GAGc---a
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11257005 41 -  27267610 ctagtattaatggg-g-tc----------a---------------t---------agaa----aagt-tca--------gaatggg-a-g--c-t------------------------------------
i Microtus_ochrogaster.CM001695.1                        C 0 I 4
s Miopithecus_ogouensis.k141_534055                           5553 54 -     28506 tgactgttgctg-ggc-cc----------c---------------c---------agat----ggat-tca--------ggaaa-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         2758 36 -      8324 ---------------------------------------------t---------agat----ttct-tca--------ggatg-gtg-g--c-a----ggttg---------------cca-g---aaga
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 6 C 0
s Mirza_zaza.k141_952172                                      6068 54 -     37649 ggaatgctggcg-gac-cc----------c---------------c---------agac----agtt-t----c-a---ggatc-a-g-gg-c-t----gatgg---------------cca-gagc---a
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138825 25 -    366855 ------------------g----------gttggta-g---c---t---------AATG----AC---TAA--------TGATG-----------------------------------------------
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 6 I 2
s Mungos_mungo.MunMun_flattened_line_23663                   32871 48 +     37127 ------------------g----------a--gc-t-gga-ctcct---------acat----acct-tca--------ggatg-ggg-g--a-t----ggttg---------------cca-gagg---t
i Mungos_mungo.MunMun_flattened_line_23663               I 6 C 0
s Mus_caroli.LT608237.1                                   84358320 50 - 120012414 tgagtgttagtgag-a-cc----------a---------------t---------agat----agct-tca--------ggatggg-a-g--c-t----ggttg---------------cca--t------
i Mus_caroli.LT608237.1                                  C 0 I 6
s Mus_musculus.chr8                                       87647308 50 - 129401213 tgagtgttagtgag-t-cc----------a---------------t---------agat----agct-tca--------ggatggg-a-g--c-t----ggttg---------------cca--t------
i Mus_musculus.chr8                                      C 0 I 6
s Mus_pahari.LT608297.1                                   31351593 50 -  89631738 tgagtattagtgag-t-cc----------a---------------t---------agat----agct-tca--------ggatggg-a-g--c-t----ggttc---------------tca--t------
i Mus_pahari.LT608297.1                                  C 0 I 6
s Mus_spretus.CM004101.1                                  90749387 50 - 130317789 tgagtgttggtgag-t-cc----------a---------------t---------agat----agct-tca--------ggatggg-a-g--c-t----ggttg---------------cca--t------
i Mus_spretus.CM004101.1                                 C 0 I 6
s Muscardinus_avellanarius.MusAve_scaffold_82313              3832 53 +     14296 acagaatcagtggg-g-tg----------t---------------t---------acat----ggct-ttg--------aggtg-g-g-g-tc-t----ggttg---------------aca--agg---a
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               298667 47 -  14710649 ------------------g----------a--gt-t-gg--cccct---------agat----gtct-tca--------ggatg-gtg-g--c-t----ggatg---------------cca-gaag---a
i Mustela_putorius.JH418006.1                            I 6 C 0
s Nasalis_larvatus.k141_413338                               11550 53 +     21681 tgac-gttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    757377 17 +    783361 ------------------a----------g---------------c---------agta----ac---taa--------tggtg-----------------------------------------------
i Noctilio_leporinus.NocLep_scaffold_251                 I 6 I 1
s Nyctereutes_procyonoides.CAJHUB010000658.1               9146968 48 -   9404916 ------------------g----------at--t-t-ggg-cccct---------agat----gtct-tca--------ggatg-gtg-g--c-t----gattg---------------cca-gaca---a
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 6 C 0
s Nycticebus_bengalensis.LG01                            102576322 23 - 196305487 --------------------------------------------------------------------------------gctg-g-g-gg-a-g----tgggg---------------cca-gagg---a
i Nycticebus_bengalensis.LG01                            C 0 I 8
s Nycticebus_coucang.k141_5327727                             4008 23 +      8486 --------------------------------------------------------------------------------gctg-g-g-gg-a-g----tgggg---------------cca-gagg---a
i Nycticebus_coucang.k141_5327727                        C 0 I 8
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105746749 23 + 199412804 --------------------------------------------------------------------------------gctg-g-g-gg-a-g----tgggg---------------cca-gagg---a
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 8
s Odobenus_rosmarus.KB229312.1                              504064 36 -   2017862 ---------------------------------------------t---------agat----ttct-tca--------ggatg-gtg-g--c-a----ggttg---------------cca-gaag---a
i Odobenus_rosmarus.KB229312.1                           I 6 C 0
s Ochotona_princeps.JH802162.1                             1359507 10 +   3988456 taggtatagt-------------------------------------------------------------------------------------------------------------------------
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   21100 41 +     28053 CTAGTATTAATggg-g-tc----------a---------------t---------agat----agct-tca--------ggatggg-a-a--c-t------------------------------------
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 4
s Onychomys_torridus.OnyTor_scaffold_2986                    76541 50 +    102263 tgagcattaatggg-c-tc----------a---------------t---------agat----agcc-tca--------ggatggg-a-g--c-t----gattg---------------cca--t------
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 6
s Otocyon_megalotis.JAEUCK010005147.1                       459722 48 -    559221 ------------------g----------at--t-t-ggg-cccct---------agat----gtct-tca--------ggatg-gtg-g--c-t----ggttg---------------cca-gaca---a
i Otocyon_megalotis.JAEUCK010005147.1                    I 6 C 0
s Pan_paniscus.KQ411613.1                                    40474 54 +     80009 tgactcttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189139366 54 + 189151597 tgactcttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Pan_troglodytes.CM009242.2                             I 36 I 86
s Panthera_onca.PanOnc_flattened_line_3271                  148644 48 +    230217 ------------------g----------a--gc-t-ggg-tccct---------aggt----atct-tca--------ggatg-ggg-g--c-t----ggttg---------------cca-gagg---c
i Panthera_onca.PanOnc_flattened_line_3271               I 6 C 0
s Panthera_pardus.KV860321.1                                261851 48 +  18783137 ------------------g----------a--gc-t-ggg-tccct---------aggt----atct-tca--------ggatg-ggg-g--c-t----ggttg---------------cca-gagg---c
i Panthera_pardus.KV860321.1                             I 6 C 0
s Panthera_tigris.KE722367.1                               4718487 48 -   8748460 ------------------g----------a--gc-t-ggg-tccct---------aggt----atct-tca--------ggatg-ggg-g--c-t----ggttg---------------cca-gagg---c
i Panthera_tigris.KE722367.1                             I 6 C 0
s Papio_anubis.CM001495.2                                183439586 54 + 183742232 tgactcttgctg-ggc-tc----------c---------------c---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             3279 54 +     20448 tgactcttgctg-ggc-cc----------c---------------c---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20560084 54 +  20919399 tgactcttgctg-ggc-tc----------c---------------c---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   2022 54 +     41871 tgactcttgctg-ggc-cc----------c---------------c---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     5308 54 +     27711 tgactcttgctg-ggc-cc----------c---------------c---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  5388 54 +      9205 tgactcttgctg-ggc-cc----------c---------------c---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Papio_ursinus.k141_3428135                             C 0 I 8
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10105 48 -     78924 ------------------g----------a--gc-t-ggg-cccct---------agat----tcct-tca--------ggatg-ggg-g--c-t----ggttg---------------cca-gagg---t
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 6 C 0
s Perodicticus_ibeanus.k141_855320                            6510 29 +     13100 --------------------------------------------------------------------------------gctg-g-g-gg-a-c----tgggg-c--------tggtccca-gagg---a
i Perodicticus_ibeanus.k141_855320                       C 0 I 8
s Perodicticus_potto.k141_1092580                             4883 29 +     25941 --------------------------------------------------------------------------------gctg-g-g-gg-a-c----tgggg-c--------tggtccca-gagg---a
i Perodicticus_potto.k141_1092580                        C 0 I 8
s Peromyscus_maniculatus.KI615324.1                       18191140 50 -  18517816 tgagcattaatgag-c-tc----------a---------------t---------agat----agct-tca--------ggatggg-a-g--c-t----ggttg---------------cca--t------
i Peromyscus_maniculatus.KI615324.1                      C 0 I 6
s Piliocolobus_badius.k141_1234363                           40062 54 +     62158 tgactgttgctg-ggc-cc----------c---------------t---------agat----ggat-tcg--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        34784 54 +     89929 tgactgttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            36200 54 +     51399 tgactgttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14292438 54 -  14605196 tgactgttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189127509 53 + 189387572 TGACTCTT-ctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggatt-g-g-gg-c-t----ggttg---------------cca-gaag---a
i Pongo_abelii.CM009266.2                                I 10 C 0
s Pongo_pygmaeus.ctg66                                     9567117 53 +   9816681 tgactctt-ctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggatt-g-g-gg-c-t----ggttg---------------cca-gaag---a
i Pongo_pygmaeus.ctg66                                   I 10 C 0
s Presbytis_comata.k141_677006                               69712 54 -     81375 tgactgttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              1532 54 +     19060 tgactgttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2593763 54 -   4620579 TGACTGTTGGTG-GTC-CC----------C---------------C---------Agac----agct-tca--------ggatg-g-g-gg-c-t----tgTGG---------------CCA-GAgc---a
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     987762 36 +   2598838 GGCTTGCTGGTG-GGC-CC----------C---------------C---------AGAC----AGCT-TCA--------GGATG-G---------------------------------------------
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 11
s Propithecus_coronatus.k141_347390                          26066 54 +     38485 ggcttgctggtg-ggc-ac----------c---------------c---------agac----agct-tca--------ggatg-g-g-gg-c-t----ggtgg---------------cca-gagc---a
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             2225 54 +      4256 ggtgtgttggtg-ggc-cc----------c---------------c---------agac----agct-tca--------ggatg-g-g-gg-t-t----ggtga---------------cca-gagc---a
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          23585 54 +     35766 ggtgtgctggtg-ggc-cc----------c---------------c---------agac----agct-tca--------ggatg-g-g-gg-t-t----ggtga---------------cca-gagc---a
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           1767 54 -     24134 ggtgtgctggtg-ggc-cc----------c---------------c---------agac----agct-tca--------ggatg-g-g-gg-c-t----ggtgg---------------cca-gagc---a
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        25580 54 -     67325 ggcgtgctggtg-ggc-cc----------c---------------c---------agac----agct-tca--------ggatg-g-g-gg-c-t----ggtgg---------------cca-gagc---a
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           1825 36 -      6182 ggcttgctggtg-ggc-cc----------c---------------c---------agac----agct-tca--------ggatg-g---------------------------------------------
i Propithecus_verreauxi.k141_956661                      C 0 I 11
s Psammomys_obesus.NESX01036370.1                             6869 50 -     21651 tgagtattagtggg-c-cc----------a---------------t---------agac----agct-tca--------gaatggg-a-a--c-t----gattg---------------cca--t------
i Psammomys_obesus.NESX01036370.1                        C 0 I 6
s Pteronotus_parnellii.KE909381.1                            12227 17 -     21811 ------------------t----------g---------------g---------agta----ac---tca--------tggtg-----------------------------------------------
i Pteronotus_parnellii.KE909381.1                        I 6 I 2
s Pteronura_brasiliensis.PteBra_flattened_line_31117         37685 47 +     42204 ------------------g----------a--gt-t-gg--cccct---------agat----gtct-tca--------ggatg-gtg-g--c-t----ggatg---------------cca-gaag---a
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 6 C 0
s Puma_concolor.QAVW01001104.1                            20271767 48 -  38429054 ------------------g----------a--gc-t-ggg-tccct---------aggt----atct-tcg--------ggatg-gga-g--c-t----ggttg---------------cca-gagg---c
i Puma_concolor.QAVW01001104.1                           I 6 C 0
s Pygathrix_cinerea.k141_1153803                             11543 54 -     91421 tgactgttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7605671 54 +   7812017 tgactgttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11519 54 -     72585 tgactgttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53567402 50 +  90668790 tgaatattagtggg-t-ac----------a---------------t---------agat----agct-tca--------ggatggg-a-g--c-t----ggttg---------------cta--t------
i Rattus_norvegicus.chr16                                C 0 I 6
s Rhinopithecus_bieti.k119_217274                             3227 54 -     11128 tgactgttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91232582 54 - 195417433 tgactgttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7668231 54 +   7961872 tgactgttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_2619299                               4490 22 -      8359 tgactcttgctg-ggc-cc----------c---------------t---------aga-------------------------------------------------------------------------
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            10799 22 -     13588 tgactcttgctg-ggc-cc----------c---------------t---------aga-------------------------------------------------------------------------
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              4435 22 -      6207 tgactcttgctg-ggc-cc----------c---------------t---------gga-------------------------------------------------------------------------
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               10162 22 +     13640 tgactcttgctg-ggc-cc----------c---------------t---------aga-------------------------------------------------------------------------
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               5025 22 +      8564 tgactcttgctg-ggc-cc----------c---------------t---------aga-------------------------------------------------------------------------
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209465303 22 + 209938924 tgactcttgctg-ggc-cc----------c---------------t---------aga-------------------------------------------------------------------------
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 4515 22 -      9399 tgactcttgctg-ggc-cc----------c---------------t---------aga-------------------------------------------------------------------------
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 1664 22 +      3421 tgactcttgctg-ggc-cc----------c---------------t---------aga-------------------------------------------------------------------------
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119947863 22 - 121099817 TGACTCTTGCTG-AGC-CC----------C---------------T---------AGA-------------------------------------------------------------------------
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       20330 22 +     46362 TGACTCTTGCTG-AGC-CC----------C---------------t---------aga-------------------------------------------------------------------------
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               20425 22 +     45824 tgactcttgctg-agc-cc----------c---------------t---------aga-------------------------------------------------------------------------
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             37040 22 -     64574 tgactcttgctg-agc-cc----------c---------------t---------aga-------------------------------------------------------------------------
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                                 46 22 -     23631 TGACTCTTGCTG-AGC-CC----------C---------------t---------aga-------------------------------------------------------------------------
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 20318 22 -     61129 tgactcttgctg-agc-cc----------c---------------t---------aga-------------------------------------------------------------------------
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          16055 54 -     19888 tgacggttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      23257 54 +     39453 tgacggttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            3783 54 +     27826 tgacggttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             3304 54 -     19483 tgacggttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      3366 54 +      7198 tgacggttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         11626 54 +     15514 tgacggttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    10562 50 -     12148 TGAGTATTACTGgg-c-tc----------a---------------t---------aggt----agct-cca--------gaatggg-g-a--c-t----gattg---------------cca--t------
i Sigmodon_hispidus.SigHis_scaffold_60841                I 20 I 6
s Solenodon_paradoxus.SolPar_flattened_line_5840            188687 47 -    191337 ------------------atggtgggtccc---------------c---------agat----agct-cca--------agata-g-g-g--c-t----ggttg---------------gga-aggg---a
i Solenodon_paradoxus.SolPar_flattened_line_5840         I 6 C 0
s Spermophilus_dauricus.KZ294078.1                         1949803 51 -   3870691 tg---atccatggg-g-cc----------c---------------t---------agat----agct-gaa--------agaca-g-a-g-ac-a----ggttg---------------cca-aagg---a
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             28209 48 +     97271 ------------------g----------a--gt-a-gga-cccct---------agat----gcct-tca--------ggatg-gtg-g--c-t----ggtta---------------cca-gaag---a
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 6 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              15768 48 -    196729 ------------------g----------a--gc-t-gga-ctcct---------acat----acct-cca--------ggatg-ggg-g--c-t----ggttg---------------cca-gagg---t
i Suricata_suricatta.SurSur_flattened_line_6629          I 6 C 0
s Sus_scrofa.JH118708.1                                      32710 26 -     47482 ----------------------------------------------------------------tct-tca--------ggatg-g-g-a--gttggttggtta---------------------------
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1089831 54 -   1523678 tgactcttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 8165 14 +     41958 -------------------------------------------------------ggta----ac---taa--------tgctg-----------------------------------------------
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 8 I 2
s Tapirus_indicus.TapInd_scaffold_9301                      116211 48 -    156842 ------------------a----------t--gg-t-ggg-cccct---------agag----atcaacca--------acaag-g-g-g--c-t----ggttg---------------cta-gagg---a
i Tapirus_indicus.TapInd_scaffold_9301                   I 6 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    384661 48 +    539355 ------------------a----------t--gg-t-gga-cccct---------agat----atcaacca--------acaag-g-g-g--c-t----ggttg---------------cca-gagg---a
i Tapirus_terrestris.TapTer_scaffold_755                 I 6 C 0
s Tarsius_lariang.k141_2201908                               12116 86 +     70052 ttactcataata-aaC-AC----------T---------------TTTCAATCTTACCT----GGGt-ttatgccaatgaggta-a-g-tg-t-t----ggtgggcccttggatagcttcag-gagg---g
i Tarsius_lariang.k141_2201908                           I 32 I 4
s Tarsius_wallacei.k141_780063                               16421 86 +     25099 ttactcataata-aac-ac----------T---------------TTTCAATCTTACCT----GGGt-ttatgccaatgaggta-a-g-tg-t-t----ggtgggcccttggatagcttcag-gagg---g
i Tarsius_wallacei.k141_780063                           I 32 I 4
s Theropithecus_gelada.CM009954.1                        186424952 54 + 186847797 cgactcttgctg-ggc-cc----------c---------------c---------agat----ggat-tca--------ggata-g-g-gg-g-t----ggttg---------------cca-gagg---a
i Theropithecus_gelada.CM009954.1                        C 0 I 8
s Trachypithecus_auratus.k141_722599                          7357 54 -     20410 tgacggttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    11552 54 +     15221 tgacggttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        7458 54 +     19930 tgacggttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       3888 54 -     19997 tgacggttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            44007 54 -     60166 tgacagttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        11478 54 -     27529 tgacggttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     11420 54 -     18194 tgacggttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           5155 54 -     21137 tgacggttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    3858 54 -     10723 tgacggttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         3010 54 +      9834 tgacggttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        21329 54 +     32220 tgacggttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Trachypithecus_obscurus.k141_190785                    C 0 I 6
s Trachypithecus_phayrei.ctg124                            5935425 54 +   6242583 tgacggttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        4672 54 +     20839 tgacggttgctg-ggc-cc----------c---------------t---------agat----ggat-tca--------ggata-g-g-gg-c-t----ggttg---------------cca-gagg---a
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2151925 44 +   4065304 ----------tg-a-gtcc----------t---------------t---------ggat----agct-tta--------gactg-a-gtg--c-t----ggtta---------------cca-gagg---g
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     5234 54 -     10553 tacatgttggtg-a-gtcc----------t---------------t---------ggat----agct-tta--------gacta-t-gca--c-t----ggtta---------------cca-gagg---g
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4847930 46 -   5085361 ------------------g----------a--gt-t-gg--cccta---------agat----gtct-tca---------gatg-gtg-g--c-t----agttg---------------tca-gaag---a
i Ursus_maritimus.KK499267.1                             I 6 C 0
s Varecia_rubra.k141_590885                                   8446 54 +     50397 ggcataatggtg-ggc-cc----------c---------------c---------agac----agct-tca--------gggag-g-g-gg-c-t----ggtgg---------------cca-gtgc---a
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              8501 54 +     24756 ggcataatggtg-ggc-cc----------c---------------c---------agac----agct-tca--------gggtg-g-g-gg-c-t----ggtgg---------------cca-gtgc---a
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5369371 39 -   5488506 -----------------------------at-gg-a-ggg-cccct---------aaat----atct-tca--------ggaag-g-a-g--c-t----ggtta---------------------------
i Vicugna_pacos.KN270157.1                               I 6 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  8378 48 -     43706 ------------------g----------at--t-t-ggg-cccct---------agat----gtct-tca--------ggatg-gtg-g--c-t----ggttg---------------cca-gaca---a
i Vulpes_lagopus.VulLag_flattened_line_30954             I 6 C 0
s Xerus_inauris.XerIna_scaffold_48378                        21178 54 -     24430 tgaatattgatggg-t-ct----------c---------------t---------agat----agct-gaa--------agatg-g-a-g-ac-t----ggttg---------------cca-gaag---a
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          2634 33 +     86975 ---------------------------------------------t---------agat----ttct-tca--------ggata-gtg-g--c-a----ggttg---------------cca-g------a
i Zalophus_californianus.ZalCal_flattened_line_17732     I 6 C 0
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519  0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188  0 +      1777 C
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      11935  1 +     63895 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383  9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   2809  0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 70244  0 +    116680 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                85637 14 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Pteropus_vampyrus.KN525825.1                             1357734 14 +   4952924 I
e Pteropus_alecto.KB030862.1                              22974644 14 +  28871421 I
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186890  0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Megaderma_lyra.MegLyr_scaffold_4542                         8178  0 -    207569 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 88455  4 +     94391 I
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8272963  1 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_29171               41045  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       109621  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Galagoides_demidoff.k141_31856                              3354  0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Eidolon_helvum.KE759718.1                                   8374  9 +     11740 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            61949  0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11664308 436 + 224834208 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          11837  0 -     20389 C
e Condylura_cristata.JH655891.1                           17547132  5 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            171068  0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15969  0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            5641  0 -      6351 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     66596  1 -     89534 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       3176 45 +     62944 a-ccaacca-----a-------gcggt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----t-----gg-----ac-t-t--c------cc
s Acinonyx_jubatus.LLWD01001279.1                           824818 46 -   1699592 a-tcaaccacgt--g-------a---t-------------t---a---g-aag-gctggaaa---t-ttcag--------c----c-----tt-----cc-c-c-ac------at
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     67669 38 +     87051 -----------------------tcaccacgtt---at--g---a---a-agt-ataagt-a--c----cag--------c----c-----cc-----ac-t-g--c--------
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 6 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9508060 48 -  29979442 a-ccaaccatgt--g-------a---t-------------t---a---g-agg-gctggaaa---t-tttgg--------c----c-----tc--aggtc-c-c--c------ac
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             76845 45 -    347723 a-ccaaccatgt--a-------g---t-------------t---a---g-agg-gctggaaa---t-tttgg--------c----c-----tc-----cc-c-g--c------ac
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   11106 45 -     52922 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----t-----gg-----ac-t-t--c------cc
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         11040 45 -     28001 a-ccaacca-----c-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-t-t--c------cc
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          1486 45 -     18505 a-ccaacca-----c-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-t-t--c------cc
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           2335 45 -     12518 a-ccaacca-----c-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-t-t--c------cc
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_2038611                             23481 27 +     24414 ---------------------------------------------------ag-attgac-a--ct-ttcag--------c----c-----cg-----ac-t-t--c------cc
i Alouatta_belzebul.k141_2038611                         C 0 C 0
s Alouatta_caraya.k141_885645                                54242 27 +     54689 ---------------------------------------------------ag-gctgac-a--ct-ttcag--------c----c-----cg-----ac-t-t--c------cc
i Alouatta_caraya.k141_885645                            C 0 C 0
s Alouatta_discolor.k141_2852575                            124831 27 +    125349 ---------------------------------------------------ag-attgac-a--ct-ttcag--------c----c-----cg-----ac-t-t--c------cc
i Alouatta_discolor.k141_2852575                         C 0 C 0
s Alouatta_juara.k141_1509701                                21176 27 +     25266 ---------------------------------------------------ag-gttgac-a--ct-ttcag--------c----c-----cg-----ac-t-t--c------cc
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                            618 27 +      2906 ---------------------------------------------------ag-gttgac-a--ct-ttcag--------c----c-----ca-----ac-t-t--c------cc
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            14731 27 -     18578 ---------------------------------------------------ag-gttgac-a--ct-ttcag--------c----c-----ca-----ac-t-t--c------cc
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_668256                              17435 27 +     18088 ---------------------------------------------------ag-gttgac-a--ct-ttcag--------c----c-----cg-----ac-t-t--c------cc
i Alouatta_palliata.k141_668256                          C 0 C 0
s Alouatta_puruensis.k141_1766044                            18486 27 -     18677 ---------------------------------------------------ag-gttgac-a--ct-ttcag--------c----c-----cg-----ac-t-t--c------cc
i Alouatta_puruensis.k141_1766044                        C 0 C 0
s Alouatta_seniculus.k141_117119                             11468 27 +     50774 ---------------------------------------------------ag-gttgac-a--ct-ttcag--------c----c-----cg-----ac-t-t--c------cc
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  12098 27 -     33861 ---------------------------------------------------ag-gttgac-a--ct-ttcag--------c----c-----cg-----ac-t-t--c------tc
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            12119 27 -     34016 ---------------------------------------------------ag-gttgac-a--ct-ttcag--------c----c-----cg-----ac-t-t--c------tc
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4294514 27 -   5030052 ---------------------------------------------------AG-GTTGAC-A--CT-TTCAG--------C----C-----CG-----AC-T-T--C------TC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             12120 27 -     34685 ---------------------------------------------------ag-gttgac-a--ct-ttcag--------c----c-----cg-----ac-t-t--c------tc
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               25241 27 -     47192 ---------------------------------------------------ag-gttgac-a--ct-ttcag--------c----c-----cg-----ac-t-t--c------tc
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       8711 45 +     20879 c-aaaacta-----t-------gtgat-------------t---a---t-att-gtcaga-a--tg-ttggg--------t----t-----cc-----ac-t-c--c------ct
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        16314 30 +     17124 ----------------------gtgat-------------t--gg---g---g-gttgga-a--cc-tgcag--------ccccac-----------------------------
i Arctocebus_calabarensis.k141_288239                    I 8 I 5
s Avahi_laniger.k141_765380                                  50757 45 -     92717 a-ccaacca-----t-------gtgat-------------t---a---g-agg-gtcaga-a--ct-ttaag--------c----c-----cc-----ac-t-c--t------cc
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              51386 45 +     85213 a-ccaacca-----t-------gtgat-------------t---a---g-agg-gtcaga-a--ct-ttagg--------c----c-----cc-----ac-t-c--t------cc
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             1850 32 -     10423 ---------------------------------------------------ag-gttgac-a--tt-ttcag--------c----tgtctata-----gc-t-t--c------ct
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             21342 27 +     31915 ---------------------------------------------------ag-gttgac-a--tt-ttcag--------c----c-----tg-----ac-t-t--c------cc
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            1817 32 +      5267 ---------------------------------------------------ag-gttgac-a--tt-ttcag--------c----tgtctata-----gc-t-t--c------cc
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23587029 32 - 189096842 ---------------------------------------------------AG-GTTGAC-A--TT-TTCAG--------C----TGTCTATA-----GC-T-T--C------cc
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              8561 32 -     12001 ---------------------------------------------------ag-gttgac-a--tt-ttcag--------c----tgtctata-----gc-t-t--c------cc
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                            9999910 40 -  17673402 ------ccatgt--g-------a---t-------------c---a---g-agg-gctgga-a---ttttctg--------c----c-----tc-----cc-t-c--c------at
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2332374 40 -   7040546 ------ccatgt--g-------a---t-------------c---a---g-agg-gctgga-a---ttttctg--------c----c-----tc-----cc-t-c--c------at
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  400650 40 -   1652518 ------ccatgt--g-------a---t-------------c---a---g-agg-gctgga-a---ttttctg--------c----c-----tc-----cc-t-c--c------at
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17796807 47 -  60362399 a-ccaaccatgtagg-------a---t-------------t---a---g-agg-gctggaaa---t-ttcag--------c----t-----tc-----cc-t-c--t------at
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182864 47 -    185531 a-ccaaccatgtagg-------a---c-------------t---a---g-agg-gctggaaa---t-ttcag--------c----t-----tc-----cc-t-c--t------at
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9032250 47 -   9314153 a-ccaaccatgtagg-------a---t-------------t---a---g-agg-gctggaaa---t-ttcag--------c----t-----tc-----cc-t-c--t------at
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17956515 47 -  59632846 a-ccaaccatgtagg-------a---c-------------t---a---g-agg-gctggaaa---t-ttcag--------c----t-----tc-----cc-t-c--t------at
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18497815 47 +  63665305 a-ccaaccatgtagg-------a---c-------------t---a---g-agg-gctggaaa---t-ttcag--------c----t-----tc-----cc-t-c--t------at
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           142568 45 -    496798 A-TCAACTA-----T-------GTGAT-------------T---A---G-AGG-ATTGAA-A--TT-TTCAG--------C----C-----TC-----AC-T-C--T------CC
i Carlito_syrichta.NW_007259797.1                        I 4 C 0
s Castor_canadensis.CasCan_scaffold_2074                    135179 44 +    179628 a-ccaacca-----t-------gtgat-------------t---a---g-agg-atcaga-g--ct-ttcag--------c----c-----cc-----ac-t-a--t-------c
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     90238 39 +    217609 ------ccatg--cg-------a---t-------------c---a---g-agg-gccgag-a---t-ttctg--------c----c-----tc-----cc-t-c--c------at
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          6470 32 -     11392 ---------------------------------------------------ag-gttgac-a--tt-ttcag--------c----tgtctata-----gc-t-t--c------cc
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               2568 32 -      7577 ---------------------------------------------------ag-gttgac-a--tt-ttcag--------c----tgtctata-----gc-t-t--c------cc
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         6477 45 -      8605 a-tcaacta-----t-------gtgat-------------t---a---g-agg-gttgaa-a--tt-ttcag--------c----c-----tc-----ac-t-c--t------cc
i Cephalopachus_bancanus.k141_2037105                    I 4 C 0
s Ceratotherium_simum.JH767749.1                          12228923 44 +  27778364 a-c-aatcatgt--g-------a---t-------------t---a---c-agg-gttggacc---t-ttctt--------c----c-----tc-----cc-t-c--c------at
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_247804          3641 44 -      3715 a-c-aatcatgt--g-------a---t-------------t---a---c-agg-gttggacc---t-ttctt--------c----c-----tc-----cc-t-c--c------at
i Ceratotherium_simum_cottoni.CerCot_scaffold_247804     C 0 N 0
s Cercocebus_atys.KQ010504.1                               4472065 45 +   4669795 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----AC-T-T--C------CC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        10613 45 -     19203 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-t-t--c------cc
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           5035 45 +      8260 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-t-t--c------cc
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           5262 45 +     27781 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-t-t--c------cc
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         5417 45 -     20310 a-ccaacca-----c-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-t-t--c------cc
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           8401 45 +     29689 a-ccaacca-----c-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-t-t--c------cc
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            2829 45 +      9989 a-ccaacca-----c-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-t-t--c------cc
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          11078 45 -     27936 a-ccaacca-----c-------gcagt-------------t---a---g-acg-gttgga-a--ct-ttcag--------c----c-----gg-----ac-t-t--c------cc
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                            11108 45 -     11289 a-cgaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-t-t--c------cc
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38813483 45 +  39242232 a-ccaacca-----c-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-t-t--c------cc
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21219179 45 -  21565898 a-cgaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-t-t--c------cc
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       36298 45 -     53127 a-cgaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-t-t--c------cc
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        3584 45 +      7159 a-ccaacca-----c-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-t-t--c------cc
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       11101 45 -     27947 a-cgaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-t-t--c------cc
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         11077 45 +     17596 a-cgaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-t-t--c------cc
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                           299 45 +     26000 a-ccaacca-----c-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-t-t--c------cc
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             18177 45 -     52598 a-ccaacca-----t-------gtgat-------------t---a---t-ggg-gtcaga-a--ct-tttgg--------c----c-----cc-----ac-t-c--t------cc
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           13526 45 +     57038 a-ccaacca-----t-------gtgat-------------t---a---t-ggg-gtcaga-a--ct-tttgg--------c----c-----cc-----ac-t-c--t------cc
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           7487 27 +     11226 ---------------------------------------------------ag-gttgac-a--tt-ttcag--------c----c-----ca-----ac-t-t--c------cc
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18425039 45 -  18827391 a-ccaacca-----c-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-t-t--c------cc
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       11480 45 -     50209 a-ccaacca-----c-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----t-----gg-----ac-t-t--c------cc
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135418486 45 + 135778131 a-ccaacca-----c-------gCAGT-------------T---A---G-aag-gttgga-a--ct-ttcag--------c----c-----ag-----AC-T-T--C------CC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1907000 45 +   2368649 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----ag-----AC-C-T--C------CC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199946672 45 + 200372422 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-c-t--c------cc
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              33544 45 +     84244 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-c-t--c------cc
i Colobus_polykomos.k141_906115                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 47384 33 +     63868 -----------------------TCTC-------------A---A---A-AGT-ATAAGA-A--AT-TTCAG--------C----C-----GC-----TC-T-C--C--------
i Cricetomys_gambianus.CriGam_scaffold_18520             I 6 C 0
s Cricetulus_griseus.LT883664.1                           11664744  7 + 224834208 -------------------------------------------------------------------------------------------CC-----AC-T-C--T--------
i Cricetulus_griseus.LT883664.1                          I 436 C 0
s Crocidura_indochinensis.CroInd_scaffold_109268              8506 49 +      9948 agccaacct-----g-------g---t-------------t---a---g-agg-cgtcag-c---t-ttctc--------c----c-----tctcctgcc-c-accc------ac
i Crocidura_indochinensis.CroInd_scaffold_109268         I 355 n 186
s Cryptoprocta_ferox.CryFer_flattened_line_16129             25983 45 -     87169 g-tcaacca--catg-------a---t-------------t---a---g-agg-gctggaaa---t-ttcac--------c----c-----tc-----cc-t-g--c------ac
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12534354 33 -  12879189 a-tcaacca-----t-------gtgat-------------t---a---g---g-attggc-a--ct-ttcag--------c----------------------------------
i Daubentonia_madagascariensis.ctg71                     C 0 I 6
s Dicerorhinus_sumatrensis.PEKH010002091.1                  670775 44 +   1390856 a-c-aatcatgt--g-------a---t-------------t---a---c-agg-gttggacc---t-ttctt--------c----c-----tc-----cc-t-c--c------at
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    3532 44 +    198055 a-c-aatcatgt--g-------a---t-------------t---a---c-agg-gttggacc---t-ttctt--------c----c-----tc-----cc-t-c--c------at
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          16896 41 -    110024 -----------------------atgtcacatt---at--a---a---g-aat-ataaga-a--ct-ttcag--------c----c-----cc-----ac-t-c--t--------
i Ellobius_lutescens.LOEQ01008920.1                      I 4 C 0
s Ellobius_talpinus.LOJH01109367.1                            2950 41 -      6299 -----------------------acgtcacatt---at--g---a---a-aat-ataaga-a--ct-ttcag--------c----c-----cc-----ac-t-c--t--------
i Ellobius_talpinus.LOJH01109367.1                       I 4 C 0
s Enhydra_lutris.KZ291758.1                               16326825 45 -  41312741 a-ccaaccatgt--g-------a---t-------------t---a---g-aga-gctggaaa---t-ttcag--------c----c-----tc-----cc-c-t--c------ac
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1280817 44 +   4378816 a-ccaaccatgt--g-------a---t-------------t---a---g-aga-gctggaac---t-ttctt--------c----c-----tc------c-c-a--t------at
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18528638 44 -  39960074 a-ccaaccatgt--g-------a---t-------------t---a---g-aga-gctggaac---t-ttctt--------c----c-----tc------c-c-a--t------at
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               30653 44 +    498745 a-ccaaccatgt--g-------a---t-------------t---a---g-aga-gctggaac---t-ttctt--------c----c-----tc------c-c-a--t------at
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21201681 45 -  21539334 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-t-t--c------cc
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              10862 45 -     14127 a-ccaacca-----t-------gtgat-------------t---a---g-agg-gtcaga-a--ct-ttcaa--------c----c-----cc-----ac-t-c--c------ct
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                3560 45 -     16928 a-ccaacca-----t-------gtgat-------------t---a---g-agg-gtcaga-a--ct-ttcaa--------c----c-----cc-----ac-t-c--c------ct
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              12593 45 -     25546 a-ccaacca-----t-------gtgat-------------t---a---g-agg-gtcaga-a--ct-ttcaa--------c----c-----cc-----ac-t-c--c------cg
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             9778 45 +     26330 a-ccaacca-----t-------gtgat-------------t---a---g-agg-gtcaga-a--ct-ttcaa--------t----c-----cc-----ac-t-c--c------ct
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 11026 45 +     23973 a-ccaacca-----t-------gtgat-------------t---a---g-agg-gtcaga-a--ct-ttcaa--------c----c-----cc-----ac-t-c--c------ct
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 9778 45 +     75513 a-ccaacca-----t-------gtgat-------------t---a---g-agg-gtcaga-a--ct-ttcaa--------t----c-----cc-----ac-t-c--c------ct
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  7729 45 +     97555 a-ccaacca-----t-------gtgat-------------t---a---g-agg-gtcaga-a--ct-ttcaa--------t----c-----cc-----ac-t-c--c------ct
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            10657 45 +     26496 a-ccaacca-----t-------gtgat-------------t---a---g-agg-gtcaga-a--ct-ttcaa--------c----c-----tc-----ac-t-c--c------ct
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  1262 45 -     17153 a-ccaacca-----t-------gtgat-------------t---a---g-agg-gtcaga-a--ct-ttcaa--------c----c-----cc-----ac-t-c--c------ct
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              10838 45 +    111500 a-ccaacca-----t-------gtgat-------------t---a---g-agg-gtcaga-a--ct-ttcaa--------t----c-----cc-----ac-t-c--c------ct
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20234684 46 + 206538554 a-tcaaccacgt--g-------a---t-------------t---a---g-agg-gctggaaa---t-ttcag--------c----c-----tt-----cc-c-c-ac------at
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20193528 46 + 205367284 a-tcaaccacgt--g-------a---t-------------t---a---g-agg-gctggaaa---t-ttcag--------c----c-----tt-----cc-c-c-ac------at
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  7040 46 -     36744 a-tcaaccacgt--g-------a---t-------------t---a---g-agg-gctggaaa---t-ttcag--------c----c-----tt-----cc-c-c-ac------at
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_266699               1326 45 +      2098 a-cccacca-----g-------gtgat-------------t---a---g-agg-gttggt-a--ct-ttcaa--------c----c-----tc-----ac-t-c--c------cc
i Galeopterus_variegatus.GalVar_scaffold_266699          C 0 C 0
s Gorilla_beringei.k141_3596273                              12411 45 -     32273 a-ccaacca-----a-------gtggt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----t-----gg-----ac-t-t--c------cc
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.CYUI03001814.1                             28920 45 -     31004 a-ccaacca-----a-------gcggt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----t-----gg-----ac-t-t--c------cc
i Gorilla_gorilla.CYUI03001814.1                         C 0 I 168
s Graphiurus_murinus.GraMur_scaffold_10447                   31631 44 +     78134 a-tcaacct-----t-------gtgat-------------t---a---g-agg-gtcaga-a--ct--tcag--------c----c-----ac-----ac-tct--t-------c
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           3919 45 -     19426 a-ccaacca-----t-------gtgat-------------t---a---g-agg-gtcaga-a--ct-ttcaa--------c----c-----cc-----ac-t-c--c------ct
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              9063 45 -     15286 a-ccaacca-----t-------gtgat-------------t---a---g-agg-gtcaga-a--ct-ttcaa--------c----c-----cc-----ac-t-c--c------ct
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             10701 45 +     18253 a-ccaacca-----t-------gtgat-------------t---a---g-agg-gtcaga-a--ct-ttcaa--------c----c-----cc-----ac-t-c--c------ct
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         10804 45 -     41752 a-ccaacca-----t-------gtgat-------------t---a---g-agg-gtcaga-a--ct-ttcaa--------c----c-----cc-----ac-t-c--c------ct
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         10637 45 -     16460 a-ccaacca-----t-------gtgat-------------t---a---g-agg-gtcaga-a--ct-ttcaa--------c----c-----cc-----ac-t-c--c------ct
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               239810 52 +    327341 g-tcaaccat--atg-------a---t-------------t---a---g-agg-gctggaaa---t-ttcac--------c----c-----tc-----cacc-c--ccccttttt
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hoolock_leuconedys.ctg274                                    431254 44 +    630532 a-acaacca-----a-------gcggt-------------t---a---g-aag-gttgga-a--ct-t-cag--------c----c-----gg-----ac-t-t--c------cc
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  41969 45 +     55795 g-tcagccacgt--g-------a---t-------------t---a---g-agg-gctggaaa---t-ttcgg--------c----c-----tc-----cc-c-c--c------ac
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_307679                               14187 45 -     15490 a-acaacca-----a-------gcggt-------------t---a---g-aag-gttgga-a--ct-ttccg--------c----c-----gg-----ac-t-t--c------cc
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              56193 45 +     67168 a-acaacca-----a-------gcggt-------------t---a---g-aag-gttgga-a--ct-ttccg--------c----c-----gg-----ac-t-t--c------cc
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189539843 45 - 191637585 a-acaacca-----a-------gcggt-------------t---a---g-aag-gttgga-a--ct-ttccg--------c----c-----gg-----ac-t-t--c------cc
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3332736 45 -  11177569 a-acaacca-----a-------gcggt-------------t---a---g-aag-gttgga-a--ct-ttccg--------c----c-----gg-----ac-t-t--c------cc
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7516770 44 -   7955117 a--aaacta-----c-------atgat-------------t---a---t-agt-accaga-a--tt-tttgg--------t----c-----cc-----ac-t-t--c------cc
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   19611 45 +     31101 a-ccaagca-----t-------gtgag-------------t---a---g-agg-gtcaga-a--ct-ttcgg--------c----c-----cc-----ac-t-c--t------cc
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15521166 45 -  30322482 a-ccaacca-----t-------gtgat-------------t---a---g-agg-gtcaga-a--ct-ttcaa--------c----c-----cc-----ac-t-c--c------ct
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        4256 27 +     64341 ---------------------------------------------------ag-gttgac-a--tt-ttcag--------c----c-----ca-----aa-t-t--c------cc
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           1316 27 +      4941 ---------------------------------------------------ag-gttgac-a--tt-ttcag--------c----c-----ca-----aa-t-t--c------cc
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4184 27 +     35603 ---------------------------------------------------ag-gttgac-a--tt-ttcag--------c----c-----ca-----aa-t-t--c------cc
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    25613 27 +     38576 ---------------------------------------------------ag-gttgac-a--tt-ttcag--------c----c-----cg-----ac-t-t--c------cc
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         22310 27 +     66356 ---------------------------------------------------ag-gttgac-a--tt-ttcag--------c----c-----cg-----ac-t-t--c------cc
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          8061 45 -     23766 a-acaacca-----t-------gtgat-------------t---a---g-agg-gttgga-a--ct-ttcag--------c----c-----cc-----ac-t-c--c------ct
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             26008 45 +     45836 a-acaacca-----t-------gtgat-------------t---a---g-agg-gttgga-a--ct-ttcag--------c----c-----cc-----ac-t-c--c------ct
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_320948                           291 45 -      1719 a-ccaacca-----t-------gtgat-------------t---a---g-agg-gtcgga-a--ct-ttcag--------c----c-----ct-----ac-t-c--c------ct
i Lepilemur_ruficaudatus.k141_320948                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      24063 45 +     54090 a-acaacca-----t-------gtgat-------------t---a---g-agg-gttgga-a--ct-ttcag--------c----c-----cc-----ac-t-c--c------ct
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3039957 45 +   3914936 a-ccaaccatgt--g-------a---t-------------t---a---g-agg-actggaaa---t-ttcag--------c----c-----tc-----tc-c-c--t------ac
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                              1433611 45 +   1826925 a-ccaacca-----a-------gcagt-------------c---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-t-t--c------cc
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            2539 30 +     11245 ----------------------ctgat-------------t--ag---g---g-gttgga-a--cc-tttag--------ccccac-----------------------------
i Loris_lydekkerianus.k141_2539221                       I 8 I 5
s Loris_tardigradus.ctg83                                  1001376 30 +   6120653 ----------------------ctgat-------------t--ag---g---g-gttgga-a--cc-tttag--------ccccac-----------------------------
i Loris_tardigradus.ctg83                                I 8 I 5
s Lycaon_pictus.CM007581.1                                17952755 47 -  59628241 a-ccaaccatgtagg-------a---t-------------t---a---g-agg-gctggaaa---t-ttcag--------c----t-----tc-----cc-t-c--t------at
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               3432 45 +     40492 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----at-t-t--c------cc
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59672686 45 +  60120075 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-t-t--c------cc
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  9188 45 -     26193 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-t-t--c------cc
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            76984 45 -    114318 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-t-t--c------cc
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  2699 45 -     23192 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-t-t--c------cc
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                12151 45 -     29190 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-t-t--c------cc
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  20719 45 +     37952 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-t-t--c------cc
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186835807 45 + 187317192 a-ccaacca-----a-------gcagt-------------t---a---G-aag-gttgga-a--ct-ttcag--------c----c-----gg-----AC-T-T--C------CC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25454370 45 -  25927173 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------t----c-----gg-----ac-t-t--c------cc
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  76568 45 +     89720 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-t-t--c------cc
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 3565 45 +     20474 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-t-t--c------cc
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   3367 45 -     14993 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-tccag--------c----c-----gg-----ac-t-t--c------cc
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  326237 45 -    668171 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-t-t--c------cc
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 1669 45 -     24072 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-t-t--c------cc
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               22306 45 -     45290 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-t-t--c------cc
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23933854 45 -  24302211 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-t-t--c------cc
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               348030 45 +    752769 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-t-t--c------cc
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              16974 45 +    737560 a-ccaaccatgt--g-------a---t-------------t---a---g-aat-gctggaat---t-ttcag--------c----a-----tc-----cc-c-a--c------ac
i Manis_javanica.JSZB01003497.1                          I 17 C 0
s Manis_pentadactyla.KN006162.1                              48359 45 -    317179 a-ccaaccatgt--g-------a---t-------------t---a---g-aat-gctggaat---t-ttcag--------c----a-----tc-----cc-c-a--c------ac
i Manis_pentadactyla.KN006162.1                          I 17 C 0
s Marmota_marmota.CZRN01000018.1                          33099082 44 -  40650429 a--aaacta-----t-------atgat-------------t---a---t-agt-accaga-a--tt-tttgg--------t----c-----cc-----ac-t-t--c------cc
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              7532 45 +     13704 a-ccaactatgt--g-------a---t-------------t---a---g-aga-gctggaaa---t-ttcgg--------c----c-----tc-----cc-c-t--c------ac
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 29274 41 +    140813 -----------------------tcacca--t-gt--tatg---g---a-agt-agaaga-a--ct-ttcag--------c----c-----cc-----gc-c-c--c--------
i Meriones_unguiculatus.MerUng_scaffold_7390             I 6 C 0
s Mesocricetus_auratus.KB708134.1                         12179799 41 -  29670104 -----------------------tcatcacatt---at--g---a---a-agt-ataaca-a--tt-ttcag--------c----c-----ct-----at-t-c--T--------
i Mesocricetus_auratus.KB708134.1                        I 15 C 0
s Mico_argentatus.k141_1239457                                2396 32 -      7380 ---------------------------------------------------ag-gttgac-a--tt-ttcag--------c----tgtctata-----gc-t-t--c------ct
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               1466 32 +     18990 ---------------------------------------------------ag-gttgac-a--tt-ttcag--------c----tgtctata-----gc-t-t--c------ct
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      2401 32 -      7356 ---------------------------------------------------ag-gttgac-a--tt-ttcag--------c----tgtctata-----gc-t-t--c------ct
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18288552 45 -  93316391 a-ccaacca-----t-------gtgat-------------t---a---g-agg-gtCAGA-A--CT-TTTGG--------C----C-----CC-----AC-T-C--A------CC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11257050 41 -  27267610 -----------------------acatcacatt---at--g---a---a-aat-ataaga-a--ct-ttcag--------t----c-----cc-----ac-t-c--t--------
i Microtus_ochrogaster.CM001695.1                        I 4 C 0
s Miopithecus_ogouensis.k141_534055                           5607 45 -     28506 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-t-t--c------cc
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         2794 45 -      8324 a-ccaaccatgt--g-------a---t-------------t---a---g-agg-actggaaa---t-ttcag--------c----c-----tc-----tc-c-c--t------ac
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      6122 45 -     37649 a-ccaacca-----t-------gtgat-------------t---a---g-agg-gtcaga-a--ct-tttgg--------c----c-----cc-----ac-t-c--t------cc
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138852 10 -    366855 ------CCC--CTAG-------A---T-------------A--------------------------------------------------------------------------
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 2 I 1
s Mungos_mungo.MunMun_flattened_line_23663                   32919 45 +     37127 g-tcaacca--catg-------a---t-------------t---a---g-agg-gttggaaa---t-ttcac--------a----c--c--ct-----ccct-t--c--------
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 2
s Mus_caroli.LT608237.1                                   84358376 41 - 120012414 -----------------------tctcca--t-g--ctatc---a---a-cat-acatga-a--ct-ttcag--------c----c-----ct-----ac-t-t--c--------
i Mus_caroli.LT608237.1                                  I 6 C 0
s Mus_musculus.chr8                                       87647364 41 - 129401213 -----------------------tcacca--t-g--ctatc---a---a-cat-acatga-a--ct-ttcag--------c----c-----cc-----ac-t-t--c--------
i Mus_musculus.chr8                                      I 6 C 0
s Mus_pahari.LT608297.1                                   31351649 41 -  89631738 -----------------------tcacca--t-g--ctatc---a---a-cat-acatga-a--ct-ttcag--------c----c-----cc-----ac-t-t--c--------
i Mus_pahari.LT608297.1                                  I 6 C 0
s Mus_spretus.CM004101.1                                  90749443 41 - 130317789 -----------------------tcacca--t-g--ctatc---a---a-cat-acatga-a--ct-ttcag--------c----c-----cc-----ac-t-t--c--------
i Mus_spretus.CM004101.1                                 I 6 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              3885 44 +     14296 a-ccaacca-----t-------gtgat-------------t---a---g-agg-gtcaga-a--ct-ttcag--------c----c-----cc-----ac-t-t--c-------c
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               298714 45 -  14710649 a-ccaaccaggt--g-------a---t-------------t---a---g-aga-gctggaaa---t-ttcag--------c----c-----tc-----cc-c-t--c------ac
i Mustela_putorius.JH418006.1                            C 0 C 0
s Nasalis_larvatus.k141_413338                               11603 45 +     21681 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-c-t--c------cc
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    757395 51 +    783361 ------acc-cta-g-------g---c-------------atcta---g-aag-gctgaa-a-c-t-ttctgcaccaccac----c-----cc-----cc-t-t--c------at
i Noctilio_leporinus.NocLep_scaffold_251                 I 1 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9147016 47 -   9404916 a-ccaaccatgtagg-------a---t-------------t---a---g-agg-gctggaaa---t-ttcag--------c----t-----tc-----cc-t-c--t------at
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102576353 30 - 196305487 ----------------------ctgat-------------t--ag---g---g-gttgga-a--cc-tttag--------acccac-----------------------------
i Nycticebus_bengalensis.LG01                            I 8 I 5
s Nycticebus_coucang.k141_5327727                             4039 30 +      8486 ----------------------ctgat-------------t--ag---g---g-gttgga-a--cc-tttag--------acccac-----------------------------
i Nycticebus_coucang.k141_5327727                        I 8 I 5
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105746780 30 + 199412804 ----------------------ctgat-------------t--ag---g---g-gttgga-a--cc-tttag--------acccac-----------------------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 8 I 5
s Odobenus_rosmarus.KB229312.1                              504100 45 -   2017862 a-ccaaccatgt--g-------a---t-------------t---a---g-agg-actggaaa---t-ttcag--------c----c-----tc-----tc-c-c--t------ac
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   21145 41 +     28053 -----------------------acatcacatt---at--g---a---a-aat-atacga-a--ct-ttcag--------c----c-----cc-----ac-t-c--t--------
i Ondatra_zibethicus.OndZib_scaffold_46174               I 4 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    76597 41 +    102263 -----------------------tcatcacat---cat--g---a---a-agt-ataaga-a--ct-ttcag--------c----c-----cc-----ac-c-c--t--------
i Onychomys_torridus.OnyTor_scaffold_2986                I 6 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       459770 47 -    559221 a-ccaaccatgtagg-------a---t-------------t---a---g-agg-gctggaaa---t-ttcag--------c----t-----tc-----cc-t-c--t------at
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Pan_paniscus.KQ411613.1                                    40528 45 +     80009 a-ccaacca-----a-------gcggt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----t-----GG-----AC-T-T--C------CC
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03001836.1                             26452 45 +     51860 a-ccaacca-----A-------GCGGT-------------T---A---g-aag-gttgga-a--ct-ttcag--------c----t-----gG-----AC-T-T--C------CC
i Pan_troglodytes.NBAG03001836.1                         I 183 I 558
s Panthera_onca.PanOnc_flattened_line_3271                  148692 46 +    230217 a-tcaaccacgt--g-------a---t-------------t---a---g-agg-gctggaaa---t-ttcag--------c----c-----tc-----cc-c-c-ac------at
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                261899 46 +  18783137 a-tcaaccacgt--g-------a---t-------------t---a---g-agg-gctggaaa---t-ttcag--------c----c-----tc-----cc-c-c-ac------at
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4718535 46 -   8748460 a-tcaaccacgt--g-------a---t-------------t---a---g-agg-gctggaaa---t-ttcag--------c----c-----tc-----cc-c-c-ac------at
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183439640 45 + 183742232 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----AC-T-T--C------CC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             3333 45 +     20448 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-t-t--c------cc
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20560138 45 +  20919399 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-t-t--c------cc
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   2076 45 +     41871 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-t-t--c------cc
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     5362 45 +     27711 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-t-t--c------cc
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  5450 36 +      9205 ----------------------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-t-t--c------cc
i Papio_ursinus.k141_3428135                             I 8 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10153 45 -     78924 g-tcaacca--catg-------a---t-------------t---a---g-agg-gctggaaa---t-ttcag--------c----c-----tt-----cc-c-c--c------ac
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            6547 30 +     13100 ----------------------gtgat-------------t--gg---g---g-gttgga-a--cc-ttcag--------ccccac-----------------------------
i Perodicticus_ibeanus.k141_855320                       I 8 I 5
s Perodicticus_potto.k141_1092580                             4920 30 +     25941 ----------------------gtgat-------------t--gg---g---g-gttgga-a--cc-ttcag--------ccccac-----------------------------
i Perodicticus_potto.k141_1092580                        I 8 I 5
s Peromyscus_maniculatus.KI615324.1                       18191196 41 -  18517816 -----------------------tcctcacatt---at--g---a---a-agt-aaaaga-a--cc-ttcag--------c----c-----cg-----gc-g-c--t--------
i Peromyscus_maniculatus.KI615324.1                      I 6 C 0
s Piliocolobus_badius.k141_1234363                           40116 45 +     62158 a-ccaagca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-c-t--c------cc
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        34838 45 +     89929 a-ccaagca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-c-t--c------cc
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            36254 45 +     51399 a-ccaagca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-c-t--c------cc
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14292492 45 -  14605196 a-ccaagca-----a-------gcagt-------------t---a---G-aag-gttgga-a--ct-ttcag--------c----c-----gg-----AC-C-T--C------CC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189127562 45 + 189387572 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gctgga-a--ct-ttcag--------c----c-----gg-----ac-t-t--c------tc
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9567170 45 +   9816681 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gctgga-a--ct-ttcag--------c----c-----gg-----ac-t-t--c------tc
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               69766 45 -     81375 a-ccaacca-----a-------gcagt-------------t---g---g-aag-gttgga-a--ct-ttcag--------c----t-----gg-----ac-c-t--c------cc
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              1586 45 +     19060 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----t-----gg-----ac-c-t--c------cc
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2593817 45 -   4620579 a-ccaacca-----t-------gtgat-------------t---a---g-agg-gtcAGA-A--CT-TTCAA--------C----C-----CC-----AC-T-C--C------CT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     987809 45 +   2598838 a-ccaacca-----t-------gtgat-------------t---a---g-agg-gtcaGA-A--CT-TTCGG--------C----C-----CC-----AC-T-C--T------CC
i Propithecus_coquerelli.NW_012148875.1                  I 11 C 0
s Propithecus_coronatus.k141_347390                          26120 45 +     38485 a-ccaacca-----t-------gtgat-------------t---a---g-agg-gtcaga-a--ct-ttcgg--------c----c-----cc-----ac-t-c--t------cc
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             2279 45 +      4256 a-ccaacca-----t-------gtgat-------------t---a---g-agg-gtcaga-a--ct-ttcgg--------c----c-----cc-----ac-t-c--t------cc
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          23639 45 +     35766 a-ccaacca-----t-------gtgat-------------t---a---g-agg-gtcaga-a--ct-ttcgg--------c----c-----cc-----ac-t-c--t------cc
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           1821 45 -     24134 a-ccaacca-----t-------gtgat-------------t---a---g-agg-gtcaga-a--ct-ttcgg--------c----c-----cc-----ac-t-c--t------cc
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        25634 45 -     67325 a-ccaacca-----t-------gtgat-------------t---a---g-agg-gtcaga-a--ct-ttcgg--------c----c-----cc-----ac-t-c--t------ct
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           1872 45 -      6182 a-ccaacca-----t-------gtgat-------------t---a---g-agg-gtcaga-a--ct-ttcgg--------c----c-----cc-----ac-t-c--t------cc
i Propithecus_verreauxi.k141_956661                      I 11 C 0
s Psammomys_obesus.NESX01036370.1                             6925 41 -     21651 -----------------------tcacca--t-gt--tatg---g---a-agt-agaaga-a--cg-ttcag--------c----c-----cc-----ac-c-c--c--------
i Psammomys_obesus.NESX01036370.1                        I 6 C 0
s Pteronotus_parnellii.KE909381.1                            12246 10 -     21811 ------ccc-cta-g-------g---t-------------a--------------------------------------------------------------------------
i Pteronotus_parnellii.KE909381.1                        I 2 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_31117         37732 45 +     42204 a-ccaaccgtgt--g-------a---t-------------t---a---g-aga-gctggaaa---t-ttcag--------c----c-----tc-----cc-c-t--c------ac
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Puma_concolor.QAVW01001104.1                            20271815 46 -  38429054 a-tcaaccacgt--g-------a---t-------------t---a---g-agg-gctggaaa---t-ttcag--------c----c-----tt-----cc-c-c-ac------at
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             11597 45 -     91421 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----ag-----ac-c-t--c------cc
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7605725 45 +   7812017 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-c-t--c------cc
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11573 45 -     72585 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-c-t--c------cc
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53567458 41 +  90668790 -----------------------tcacca--t-g--ctatc---a---a-cat-atgtga-c--ct-ttcag--------c----c-----cc-----ac-c-t--c--------
i Rattus_norvegicus.chr16                                I 6 C 0
s Rhinopithecus_bieti.k119_217274                             3281 45 -     11128 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gctgga-a--ct-ttcag--------c----c-----gg-----ac-c-t--c------cc
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91232636 45 - 195417433 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gctgga-a--ct-ttcag--------c----c-----gg-----ac-c-t--c------cc
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7668285 45 +   7961872 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gctgga-a--ct-ttcag--------c----c-----gg-----ac-c-t--c------cc
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_2619299                               4512 27 -      8359 ---------------------------------------------------ag-gttgac-a--tt-ttcag--------c----c-----ca-----ac-t-t--c------cc
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            10821 27 -     13588 ---------------------------------------------------ag-gttgac-a--tt-ttcag--------c----c-----ca-----ac-t-t--c------cc
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              4457 27 -      6207 ---------------------------------------------------ag-gttgac-a--tt-ttcag--------c----c-----ca-----ac-t-t--c------cc
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               10184 27 +     13640 ---------------------------------------------------ag-gttgac-a--tt-ttcag--------c----c-----ca-----ac-t-t--c------cc
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               5047 27 +      8564 ---------------------------------------------------ag-gttgac-a--tt-ttcag--------c----c-----ca-----ac-t-t--c------cc
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209465325 27 + 209938924 ---------------------------------------------------ag-gttgac-a--tt-ttcag--------c----c-----ca-----ac-t-t--c------cc
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 4537 27 -      9399 ---------------------------------------------------ag-gttgac-a--tt-ttcag--------c----c-----ca-----ac-t-t--c------cc
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 1686 27 +      3421 ---------------------------------------------------ag-gttgac-a--tt-ttcag--------c----c-----ca-----ac-t-t--c------cc
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119947885 27 - 121099817 ---------------------------------------------------AG-GTTGAC-A--CT-TTCAG--------C----C-----CG-----AC-T-T--C------Cc
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       20352 27 +     46362 ---------------------------------------------------ag-gttgac-a--ct-ttcag--------c----c-----cg-----ac-t-t--c------cc
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               20447 27 +     45824 ---------------------------------------------------ag-gttgac-a--ct-ttcag--------c----c-----cg-----ac-t-t--c------cc
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             37062 27 -     64574 ---------------------------------------------------ag-gttgac-a--ct-ttcag--------c----c-----cg-----ac-t-t--c------cc
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                                 68 27 -     23631 ---------------------------------------------------ag-gttgac-a--ct-ttcag--------c----c-----cg-----ac-t-t--c------cc
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 20340 27 -     61129 ---------------------------------------------------ag-gttgac-a--ct-ttcag--------c----c-----cg-----ac-t-t--c------cc
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          16109 45 -     19888 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-c-t--c------cc
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      23311 45 +     39453 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-c-t--c------cc
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            3837 45 +     27826 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-c-t--c------cc
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             3358 45 -     19483 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-c-t--c------cc
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      3420 45 +      7198 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-c-t--c------cc
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         11680 45 +     15514 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-c-t--c------cc
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    10618 43 -     12148 -----------------------tcatcacgttgtgatatg---a---a-agt-at---g-a--ct-ttcaa--------t----c-----cc-----at-t-c--t--------
i Sigmodon_hispidus.SigHis_scaffold_60841                I 6 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            188734 53 -    191337 a-tcaacca-----tgttattaa---t-------------t---a---g-tgg-attgga-a---c-ttttc--------t----t-----gctcattgc-c-a--c------ac
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1949854 44 -   3870691 a--aaacta-----c-------atgat-------------t---a---t-agt-accaga-a--tt-tttgg--------t----c-----cc-----ac-t-t--c------cc
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             28257 45 +     97271 a-caaaccatg-a-g-------a---t-------------t---a---g-agg-gttgaaaa---t-ttcag--------c----c-----tc-----cc-c-t--c------ac
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              15816 46 -    196729 g-tcaacca--catg-------a---t-------------t---a---g-agg-gctggaaa---t-ttcac--------c----c-----ac-----ccct-c--c------cc
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 1
s Sus_scrofa.JH118708.1                                      32736 42 -     47482 ------ccgtg--ca-------a---t-------------c---acggg-aag-gctggg-a---t-ttctg--------c----c-----tc-----cc-t-c--c------ac
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1089885 45 -   1523678 a-acaacca-----a-------gctgt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-t-t--c------cc
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 8181  9 +     41958 ------ccc-cta-g-------a---t----------------------------------------------------------------------------------------
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 2 I 62
s Tapirus_indicus.TapInd_scaffold_9301                      116259 44 -    156842 a-c-agttgtgt--a-------a---t-------------t---a---c-agg-agtagaca---t-ttctt--------c----c-----tc-----tc-c-t--c------at
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    384709 44 +    539355 a-c-aattgtgt--g-------a---t-------------t---a---c-agg-actggacc---t-ttctt--------c----c-----tc-----cc-c-c--c------at
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               12206 45 +     70052 a-tcaacta-----t-------gtgat-------------t---a---g-agg-gttgaa-a--tt-ttcag--------c----c-----tc-----ac-t-c--t------cc
i Tarsius_lariang.k141_2201908                           I 4 C 0
s Tarsius_wallacei.k141_780063                               16511 45 +     25099 a-tcaacta-----t-------gtgat-------------t---a---g-agg-gttgaa-a--tt-ttcag--------c----c-----tc-----ac-t-c--t------cc
i Tarsius_wallacei.k141_780063                           I 4 C 0
s Theropithecus_gelada.CM009954.1                        186425014 36 + 186847797 ----------------------GCAGT-------------C---A---G-aag-gttgga-a--ct-ttcag--------c----c-----gg-----AC-T-T--C------CC
i Theropithecus_gelada.CM009954.1                        I 8 C 0
s Trachypithecus_auratus.k141_722599                          7411 45 -     20410 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-c-t--c------cc
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    11606 45 +     15221 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-c-t--c------cc
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        7512 45 +     19930 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-c-t--c------cc
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       3942 45 -     19997 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----t-----gg-----ac-c-t--c------cc
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            44061 45 -     60166 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-c-t--c------cc
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        11532 45 -     27529 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-c-t--c------cc
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     11474 45 -     18194 a-ctaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-c-t--c------cc
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           5209 45 -     21137 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-c-t--c------cc
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    3912 45 -     10723 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-c-t--c------cc
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         3064 45 +      9834 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-c-t--c------cc
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        21389 35 +     32220 -----------------------cagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-c-t--c------cc
i Trachypithecus_obscurus.k141_190785                    I 6 C 0
s Trachypithecus_phayrei.ctg124                            5935479 45 +   6242583 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-c-t--c------cc
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        4726 45 +     20839 a-ccaacca-----a-------gcagt-------------t---a---g-aag-gttgga-a--ct-ttcag--------c----c-----gg-----ac-c-t--c------cc
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2151969 45 +   4065304 a-ccaacaa-----t-------gtgat-------------t---a---g-ggg-gttgga-c--ct-ttcag--------c----c-----cc-----ag-a-c--t------ca
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     5288 45 -     10553 a-ccaacaa-----t-------gtgat-------------t---a---g-agg-tttgga-a--ct-ttcag--------t----c-----tc-----ag-a-c--t------ca
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4847976 45 -   5085361 a-ccaaccatgt--g-------a---t-------------t---a---g-agg-gctggaaa---t-tttgg--------c----c-----tc-----tc-c-c--c------ac
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   8500 45 +     50397 a-ccaacca-----a-------gtgat-------------t---a---g-agg-gtcaga-a--ct-ttcaa--------c----c-----cc-----ac-t-c--c------ct
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              8555 45 +     24756 a-ccaacca-----a-------gtgat-------------t---a---a-agg-gtcaga-a--ct-ttcaa--------c----c-----cc-----ac-t-c--c------ct
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5369410 40 -   5488506 ------ccatgt--g-------a---t-------------c---a---g-agg-gctgga-a---ttttctg--------c----c-----tc-----cc-t-c--c------at
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  8426 47 -     43706 a-ccaatcatgtagg-------a---t-------------t---a---g-agg-gctggaaa---t-ttcag--------c----t-----tc-----cc-t-t--t------at
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        21232 45 -     24430 a-acaacta-----c-------gtgat-------------t---a---t-agt-gtcaga-a--ta-tttgg--------t----c-----cc-----ac-t-t--c------cc
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          2667 45 +     86975 a-ccaaccatgt--g-------a---t-------------t---a---g-agg-actggaaa---t-ttcag--------c----c-----tc-----tt-c-c--t------ac
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519  0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188  0 +      1777 C
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      11935  1 +     63895 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383  9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   2809  0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 70244  0 +    116680 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                85637 14 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Pteropus_vampyrus.KN525825.1                             1357734 14 +   4952924 I
e Pteropus_alecto.KB030862.1                              22974644 14 +  28871421 I
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1359517  0 +   3988456 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186890  0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Megaderma_lyra.MegLyr_scaffold_4542                         8178  0 -    207569 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 88455  4 +     94391 I
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8272963  1 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_29171               41045  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       109621  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Galagoides_demidoff.k141_31856                              3354  0 -      3432 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Eidolon_helvum.KE759718.1                                   8374  9 +     11740 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            61949  0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834294 44 +   1526836 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          11837  0 -     20389 C
e Condylura_cristata.JH655891.1                           17547132  5 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            171068  0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15969  0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            5641  0 -      6351 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     66596  1 -     89534 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       3221 41 +     62944 c-t-acctctgaaaaggga-a--g-----a-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
s Acinonyx_jubatus.LLWD01001279.1                           824864 39 -   1699592 t-g-atttctg--ga-aag-g--t-g---a-----gaca-tgcta---gg--g-g-tta-a-g--ttt--
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     67707 16 +     87051 ------------aag-gag-gaag-----a-----aatg-g-----------------------------
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9508108 35 -  29979442 t-g-acctctg--ga-gag-g--g-g---a-----gagg-ggctg---gg--g-g-tta-a---------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 3
s Ailurus_fulgens.LNAC01001112.1                             76890 39 -    347723 t-g-accccta--ga-gag-a--g-g---a-----aagg-ggctg---gg--a-g-tta-a-g--ttc--
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   11151 41 -     52922 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-t-g--ttcaa
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         11085 41 -     28001 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcag
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          1531 41 -     18505 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcgg
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           2380 41 -     12518 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcag
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_2038611                             23508 41 +     24414 c-t-acctgtgaaaaggga-a--g-----a-----gggg-c--tg---ga--g-a-ttg-a-g--ttcag
i Alouatta_belzebul.k141_2038611                         C 0 C 0
s Alouatta_caraya.k141_885645                                54269 41 +     54689 c-t-acctctgaaaaggga-a--g-----a-----gggg-c--tg---ga--g-a-ttg-a-g--ttcag
i Alouatta_caraya.k141_885645                            C 0 C 0
s Alouatta_discolor.k141_2852575                            124858 41 +    125349 c-t-acctgtgaaaaggga-a--g-----a-----gggg-c--tg---ga--g-a-ttg-a-g--ttcag
i Alouatta_discolor.k141_2852575                         C 0 C 0
s Alouatta_juara.k141_1509701                                21203 41 +     25266 c-t-acctctgaaaaggga-a--g-----a-----gggg-c--tg---ga--g-a-ttg-a-g--ttcag
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                            645 41 +      2906 c-t-acctctgaaaaggga-a--g-----a-----gggg-c--tg---ga--g-a-ttg-a-g--ttcag
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            14758 41 -     18578 c-t-acctctgaaaaggga-a--g-----a-----gggg-c--tg---ga--g-a-ttg-a-g--ttcag
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_668256                              17462 41 +     18088 c-t-acctctgaaaaggga-a--g-----a-----gggg-c--tg---ga--g-a-ttg-a-g--ttcag
i Alouatta_palliata.k141_668256                          C 0 C 0
s Alouatta_puruensis.k141_1766044                            18513 41 -     18677 c-t-acctctgaaaaggga-a--g-----a-----gggg-c--tg---ga--g-a-ttg-a-g--ttcag
i Alouatta_puruensis.k141_1766044                        C 0 C 0
s Alouatta_seniculus.k141_117119                             11495 41 +     50774 c-t-acctctgaaaaggga-a--g-----a-----gggg-c--tg---ga--g-a-ttg-a-g--ttcag
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  12125 41 -     33861 c-t-acctctgaaaaggga-a--g-----a-----gggg-t--tg---ga--g-a-ttg-a-g--ttcaa
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            12146 41 -     34016 c-t-acctctgaaaaggga-a--g-----a-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4294541 41 -   5030052 C-T-ACCTCTGAAAAGGGA-a--g-----a-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             12147 41 -     34685 c-t-acctctgaaaaggga-a--g-----a-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               25268 41 -     47192 c-t-acctctgaaaaggga-a--g-----a-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       8756 40 +     20879 c-t-acctctgggaa-gag-a--g-----a-----aatg-t--ta---ga--g-a-ttt-a-a--ttcaa
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        16349 46 +     17124 c-t-acctctgagaaaggg-a--gaggaca-----ggga-c--tg---ga--c-a-ttg-a-g--ttcaa
i Arctocebus_calabarensis.k141_288239                    I 5 C 0
s Avahi_laniger.k141_765380                                  50802 41 -     92717 g-t-acctctgggataggg-a--g-----a-----gggg-c--tg---gg--g-a-ttg-a-g--ttcca
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              51431 41 +     85213 g-t-acctctgggataggg-a--g-----a-----gggg-c--tg---gg--g-a-ttg-a-g--ttcca
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             1882 41 -     10423 c-t-gcctctgaaaaggga-a--g-----a-----gggg-c--tg---ca--g-a-ttg-a-g--ttcaa
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             21369 41 +     31915 c-t-gcctctgaaaaggga-a--g-----a-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            1849 41 +      5267 c-t-gcctctgaaaaggga-a--g-----a-----gggg-c--tg---ca--g-a-ttg-a-g--ttcaa
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23587061 41 - 189096842 c-t-gcctctgaaaaggga-a--g-----a-----gggg-c--tg---ca--g-a-ttg-a-g--ttcaa
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              8593 41 -     12001 c-t-gcctctgaaaaggga-a--g-----a-----gggg-c--tg---ca--g-a-ttg-a-g--ttcaa
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                            9999950 41 -  17673402 t-g-acctctg--ga-gaa-g--g-g-agg-----gagg-c--tg---cg--g-g-ata-a-c--ttcga
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2332414 41 -   7040546 t-g-acctctg--ga-gaa-g--g-g-agg-----gagg-c--tg---gg--g-g-ata-a-c--ttcga
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  400690 41 -   1652518 t-g-acctctg--ga-gaa-g--g-g-agg-----gagg-c--tg---gg--g-g-ata-a-c--ttcga
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17796854 38 -  60362399 t-g-atctctg--ga-gag-g--g-g---a-----gagg-ggct----gg--g-g-tta-a-g--ttt--
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182911 38 -    185531 t-g-atctctg--ga-gag-g--g-g---a-----gagg-ggct----gg--g-g-tta-a-g--ttt--
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9032297 38 -   9314153 t-g-atctctg--ga-gag-g--g-g---a-----gagg-ggct----gg--g-g-tta-a-g--ttt--
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17956562 38 -  59632846 t-g-atctctg--ga-gag-g--g-g---a-----gagg-ggct----gg--g-g-tta-a-g--ttt--
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18497862 38 +  63665305 t-g-atctctg--ga-gag-g--g-g---a-----gagg-ggct----gg--g-g-tta-a-g--ttt--
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           142613 35 -    496798 C-T-ACCTCCA------GC-A--G-----A-----GGAA-C--TT---GA--A-A-TCA-A-A--TTCAA
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    135223 40 +    179628 c-t-acatccacgga-agc-a--g-----a-----gagg-c--aa---ga--a-a-ttg-a-g--atcaa
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     90277 16 +    217609 t-g-acctctg--ga-gaa-g--g----------------------------------------------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 11
s Cebuella_niveiventris.k141_1251222                          6502 41 -     11392 c-t-gcctctgaaaaggga-a--g-----a-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               2600 41 -      7577 c-t-gcctctgaaaaggga-a--g-----a-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         6522 35 -      8605 c-t-acctcca------gc-a--g-----a-----ggaa-c--tt---ga--c-a-tca-a-a--ttcaa
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12228967 41 +  27778364 t-t-acctctg--ga-gag-g-gg-----a-----gagg-ggctg---gg--g-g-tta-a-g--ttcaa
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634              0 35 -     25243 --------ctg--ga-gag-g-gg-----a-----gagg-ggctg---gg--g-g-tta-a-g--ttcaa
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      N 0 C 0
s Cercocebus_atys.KQ010504.1                               4472110 42 +   4669795 C-T-ACCTCTGAAAAGGGA-A--G----Gg-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        10658 41 -     19203 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           5080 41 +      8260 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           5307 41 +     27781 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         5462 41 -     20310 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcag
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           8446 41 +     29689 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcag
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            2874 41 +      9989 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcag
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          11123 41 -     27936 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--a-a-ttg-a-g--ttcag
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                            11153 41 -     11289 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcag
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38813528 41 +  39242232 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcag
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21219224 41 -  21565898 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcag
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       36343 41 -     53127 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcag
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        3629 41 +      7159 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcag
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       11146 41 -     27947 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcag
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         11122 41 +     17596 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcag
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                           344 41 +     26000 c-t-acctctgaaaaggga-a--g-----a-----gggg-c--tg---ga--g-a-ttg-a-g--ttcag
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             18222 41 -     52598 c-t-acctctgggaaaggg-a--g-----a-----ggag-c--tg---gg--g-a-ctg-a-g--ttcaa
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           13571 41 +     57038 c-t-acctctgggaaaggg-a--g-----a-----ggag-c--ta---gg--g-a-ctg-a-g--ttcaa
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           7514 41 +     11226 c-t-gcctctgaaaaggga-a--g-----a-----gggg-c--tg---ga--g-a-ttg-a-g--tttaa
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18425084 41 -  18827391 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcag
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       11525 41 -     50209 c-t-acctctgaaaagcga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcag
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135418531 41 + 135778131 C-T-ACCTCTGAAAAGGGA-A--G-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1907045 41 +   2368649 C-T-ACCTCTGAAAAGGGA-A--G-----c-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199946717 41 + 200372422 c-t-acctctgaaaaggga-a--g-----c-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              33589 41 +     84244 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Colobus_polykomos.k141_906115                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 47417 16 +     63868 ------------ATG-GAG-GAAG-----A-----AAAg-g-----------------------------
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_807070              1085 21 +      1402 -----------------------------------gtg--g--tg---gg--gtt-ctg-a-g--tccag
i Crocidura_indochinensis.CroInd_scaffold_807070         I 225 C 0
s Cricetulus_griseus.LT883664.1                           11664751  7 + 224834208 ------------AGG-GAA-G-------------------------------------------------
i Cricetulus_griseus.LT883664.1                          C 0 I 8
s Cryptoprocta_ferox.CryFer_flattened_line_16129             26028 39 -     87169 t-g-atctctg--aa-aag-g--t-g---a-----gaga-ggctg---gg--g-g-cta-a-g--ttc--
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    834338 10 +   1526836 --------------------------------------------------------ACT-A-G--Ttcag
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 44 C 0
s Daubentonia_madagascariensis.ctg71                      12534393 41 -  12879189 t-c-acctctgggaaaggg-a--g-----a-----gggg-c--tg---gg--g-a-ttg-a-g--ttcaa
i Daubentonia_madagascariensis.ctg71                     I 6 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  670819 41 +   1390856 t-t-acctcta--ga-gag-g-gg-----a-----gagg-ggctg---gg--g-g-tta-a-g--ttcaa
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    3576 40 +    198055 t-t-acctctg--ga-gag-g-gg-----a-----gagg-ggttg---g---g-g-tta-a-g--ttcaa
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          16937 16 -    110024 ------------agg-aag-gagg-----a-----aatg-g-----------------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01109367.1                            2991 16 -      6299 ------------agg-aag-gagg-----a-----aatg-g-----------------------------
i Ellobius_talpinus.LOJH01109367.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16326870 38 -  41312741 t-g-atctct---ga-gag-g--g-g---a-----gaag-ggctg---gg--g-g-tta-a-g--ttc--
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1280861 41 +   4378816 t-cttcctctg--ga-gag-g--t-----a-----tagg-ggctg---gg--g-g-tta-a-g--ttcaa
i Equus_asinus.JREZ01000139.1                            C 0 I 7
s Equus_caballus.CM000403.2                               18528682 40 -  39960074 t-g-acctctg--ga-gag-g--t-----a-----tagg-ggctg---gg--g-g-tta-a-g--ttcaa
i Equus_caballus.CM000403.2                              C 0 I 7
s Equus_przewalskii.KK951119.1                               30697 40 +    498745 t-g-acctctg--ga-gag-g--t-----a-----tagg-ggctg---gg--g-g-tta-a-g--ttcaa
i Equus_przewalskii.KK951119.1                           C 0 I 7
s Erythrocebus_patas.Contig38                             21201726 41 -  21539334 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcag
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              10907 41 -     14127 c-t-acctctgggaaaggg-a--g-----a-----gggg-c--ta---gg--g-a-ttg-a-g--ttcaa
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                3605 41 -     16928 c-t-acctctgggaaaggg-a--g-----a-----gggg-c--ta---gg--g-a-ttg-a-g--ttcaa
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              12638 41 -     25546 c-t-acctctgggaaaggg-a--g-----a-----gggg-c--ta---gg--g-a-ttg-a-g--ttcaa
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             9823 41 +     26330 c-t-acctctgggaaaggg-a--g-----a-----gggg-c--ta---gg--g-a-ttg-a-g--ttcaa
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 11071 41 +     23973 c-t-acctctgggaaaggg-a--g-----a-----gggg-c--ta---gg--g-a-ttg-a-g--ttcaa
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 9823 41 +     75513 c-t-acctctgggaaaggg-a--g-----a-----gggg-c--ta---gg--g-a-ttg-a-g--ttcaa
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  7774 41 +     97555 c-t-acctctgggaaaggg-a--g-----a-----gggg-c--ta---gg--g-a-ttg-a-g--ttcaa
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            10702 41 +     26496 c-t-acctctgggaaaggg-a--g-----a-----gggg-c--ta---gg--g-a-ttg-a-g--ttcaa
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  1307 41 -     17153 c-t-acctctgggaaaggg-a--g-----a-----gggg-c--ta---gg--g-a-ttg-a-g--ttcaa
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              10883 41 +    111500 c-t-acctctgggaaaggg-a--g-----a-----gggg-c--ta---gg--g-a-ttg-a-g--ttcaa
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20234730 39 + 206538554 t-g-atttctg--ga-aag-g--t-g---a-----gaca-tgctg---gg--g-g-tta-a-g--ttt--
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20193574 39 + 205367284 t-g-atttctg--ga-aag-g--t-g---a-----gaca-tgctg---gg--g-g-tta-a-g--ttt--
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  7086 39 -     36744 t-g-atttctg--ga-aag-g--t-g---a-----gaca-tgctg---gg--g-g-tta-a-g--ttt--
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galagoides_demidoff.k141_31856                              3354 29 -      3432 --------ctgagaaaatg-a--c-----a--tg-aagg-c--tgtgttg--a-----------------
i Galagoides_demidoff.k141_31856                         C 0 N 0
s Galeopterus_variegatus.GalVar_scaffold_266699               1371 41 +      2098 c-t-acctctgggaaggag-a--g-----a-----agag-c--tg---ga--g-a-tta-a-g--ttcaa
i Galeopterus_variegatus.GalVar_scaffold_266699          C 0 C 0
s Gorilla_beringei.k141_3596273                              12456 40 -     32273 c-t-acctctg-aaaggga-a--g-----a-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.CYUI03002298.1                              6703 41 -      7222 c-t-a-ctctg-aaaggga-a--g-----a-----gggg-c--tg---ga--g-a-ttg-a-gctttcaa
i Gorilla_gorilla.CYUI03002298.1                         n 168 I 45
s Graphiurus_murinus.GraMur_scaffold_10447                   31675 40 +     78134 c-t-acctctgaggg-gag-g--a-----a-----gaag-c--ta---aa--g-a-ttg-a-a--ttcaa
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           3964 41 -     19426 c-t-acctctgggaaaggg-a--g-----a-----gggg-c--ta---gg--g-a-ttg-a-g--ttcaa
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              9108 41 -     15286 c-t-acctctgggaaaggg-a--g-----a-----gggg-c--ta---gg--g-a-ttg-a-g--ttcaa
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             10746 41 +     18253 c-t-acctctgggaaaggg-a--g-----a-----gggg-c--ta---gg--g-a-ttg-a-g--ttcaa
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         10849 41 -     41752 c-t-acctctgggaaaggg-a--g-----a-----gggg-c--ta---gg--g-a-ttg-a-g--ttcaa
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         10682 41 -     16460 c-t-acctctgggaaaggg-a--g-----a-----gggg-c--ta---gg--g-a-ttg-a-g--ttcaa
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               239862 39 +    327341 t-g-atccctg--aa-cag-g--t-g---a-----gaga-agctg---gg--g-g-cta-a-g--ttc--
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hoolock_leuconedys.ctg274                                    431298 41 +    630532 c-t-acctctgaaaaagga-a--g-----a-----gggg-c--tg---ga--c-a-gtg-a-g--tttaa
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  42014 39 +     55795 t-g-atctctg--aa-aag-g--t-g---a-----gaga-ggctg---gg--a-g-cta-a-g--ttc--
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_307679                               14232 41 -     15490 c-t-acctctgaaaaggga-a--g-----a-----gggg-c--tg---ga--g-a-gtg-a-g--ttcaa
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              56238 41 +     67168 c-t-acctctgaaaaggga-a--g-----a-----gggg-c--tg---ga--g-a-gtg-a-g--ttcaa
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189539888 41 - 191637585 c-t-acctctgaaaaggga-a--g-----a-----gggg-c--tg---ga--g-a-gtg-a-g--ttcaa
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3332781 41 -  11177569 c-t-acctctgaaaaggga-a--g-----a-----gggg-c--tg---ga--g-a-gtg-a-g--ttcaa
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7516814 40 -   7955117 t-t-acctctgggaa-gaa-a--g-----a-----atgg-c--ta---ga--g-a-ttt-a-a--ttcaa
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   19656 41 +     31101 c-t-acctctgggaaaggg-a--g-----a-----gggg-c--tg---gg--g-a-ttg-g-c--ttcaa
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15521211 41 -  30322482 c-t-acctctgggaaaggg-a--g-----a-----gggg-c--ta---ag--g-a-ttg-a-g--ttcaa
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        4283 41 +     64341 c-t-gcctctgaaaaggga-a--g-----a-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           1343 41 +      4941 c-t-gcctctgaaaaggga-a--g-----a-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4211 41 +     35603 c-t-gcctctgaaaaggga-a--g-----a-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    25640 41 +     38576 c-t-gcctctgaaaaggga-a--g-----a-----gggg-c--tg---ga--g-a-ttg-a-g--ctcaa
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         22337 41 +     66356 c-t-gcctctgaaaaggga-a--g-----a-----gggg-c--tg---ga--g-a-ttg-a-g--ctcaa
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          8106 41 -     23766 c-t-acctctgggaaaagg-a--g-----a-----gggg-c--tg---gg--c-a-atg-a-a--ttcaa
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             26053 41 +     45836 c-t-acctctgggaaaagg-a--g-----a-----gggg-c--tg---gg--c-a-atg-a-a--ttcaa
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_320948                           336 41 -      1719 c-t-acctctgggaaaagg-a--g-----a-----gggg-c--tg---gg--g-a-ttg-a-g--ttcaa
i Lepilemur_ruficaudatus.k141_320948                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      24108 41 +     54090 c-t-acctctgggaaaagg-a--g-----a-----gggg-c--tg---gg--c-a-atg-a-a--ttcaa
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3040002 39 +   3914936 t-g-atctctg--ga-gag-g--g-g---a-----gacg-ggcta---ga--g-g-tta-a-g--ttc--
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                              1433656 41 +   1826925 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            2574 46 +     11245 t-t-acctctgagaaaggg-a--gaggaca-----gggg-c--tg---gg--g-a-ttg-a-g--ttcaa
i Loris_lydekkerianus.k141_2539221                       I 5 C 0
s Loris_tardigradus.ctg83                                  1001411 46 +   6120653 t-t-acctctgagaaaggg-a--gaggaca-----gggg-c--tg---gg--g-a-ttg-a-g--ttcaa
i Loris_tardigradus.ctg83                                I 5 C 0
s Lycaon_pictus.CM007581.1                                17952802 38 -  59628241 t-g-atctctg--ga-gag-g--g-g---a-----gagg-ggct----gg--g-g-tta-a-g--ttt--
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               3477 41 +     40492 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-t-g--ttcag
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59672731 41 +  60120075 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-t-g--ttcag
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  9233 41 -     26193 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-t-g--ttcag
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            77029 41 -    114318 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-t-g--ttcag
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  2744 41 -     23192 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-t-g--ttcag
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                12196 41 -     29190 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-t-g--ttcag
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  20764 41 +     37952 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-t-g--ttcag
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186835852 41 + 187317192 C-T-ACCTCTGAAAaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-t-g--ttcag
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25454415 41 -  25927173 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-t-g--ttcag
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  76613 41 +     89720 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-t-g--ttcag
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 3610 41 +     20474 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-t-g--ttcag
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   3412 41 -     14993 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-t-g--ttcag
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  326282 41 -    668171 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-t-g--ttcag
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 1714 41 -     24072 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-t-g--ttcag
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               22351 41 -     45290 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-t-g--ttcag
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23933899 41 -  24302211 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               348075 41 +    752769 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              17019 39 +    737560 t-g-acctgtg--ga-gag-g--g-g---a-----gagg-ggcag---gg--g-g-caa-a-g--ttc--
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              48404 39 -    317179 t-g-acctgtg--ga-gag-g--g-g---a-----gagg-ggcag---gg--g-g-caa-a-g--ttc--
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33099126 40 -  40650429 c-t-acctctgggaa-gaa-a--g-----a-----atgg-c--ta---ga--g-a-atc-a-a--ttcaa
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              7577 39 +     13704 t-g-atctctg--ga-gag-g--g-g---a-----gaag-ggctg---gg--g-g-tta-a-g--ttc--
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 29315 16 +    140813 ------------aag-gag-gaag-----a-----aatg-g-----------------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12179840 16 -  29670104 ------------AAG-GAG-GAAG-----A-----AAAG-T-----------------------------
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                2428 41 -      7380 c-t-gcctctgaaaaggga-a--g-----a-----gggg-c--tg---ca--g-a-ttg-a-g--ttcaa
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               1498 41 +     18990 c-t-gcctctgaaaaggga-a--g-----a-----gggg-c--tg---ca--g-a-ttg-a-g--ttcaa
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      2433 41 -      7356 c-t-gcctctgaaaaggga-a--g-----a-----gggg-c--tg---ca--g-a-ttg-a-g--ttcaa
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18288597 41 -  93316391 C-T-ACCtctgggaaaggg-a--g-----a-----ggag-c--TG---GG--G-A-TTG-A-G--ttcaa
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11257091 16 -  27267610 ------------agg-aag-gagg-----a-----aaag-g-----------------------------
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miopithecus_ogouensis.k141_534055                           5652 41 -     28506 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcag
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         2839 39 -      8324 t-g-atctctg--ga-gag-g--g-g---a-----gacg-ggcta---ga--g-g-tta-a-g--ttc--
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      6167 41 -     37649 c-t-acctctgggaaaggg-a--g-----a-----ggag-c--tg---gg--g-a-ttg-a-g--ttcaa
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138863 41 -    366855 T-T-atctctg--ga-gag-g--g-----taaaggc----a--ct---ga--g-g-gtt-aac--ttcaa
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 1 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   32966 38 +     37127 --g-atctctg--aa-cag-g--t-g---a-----gaga-ggctg---gg--g-g-cta-a-g--ttc--
i Mungos_mungo.MunMun_flattened_line_23663               I 2 C 0
s Mus_caroli.LT608237.1                                   84358417 16 - 120012414 ------------aag-gaa-gaag-----a-----aatg-g-----------------------------
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87647405 16 - 129401213 ------------aag-gaa-gaag-----a-----aata-g-----------------------------
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31351690 16 -  89631738 ------------aag-gag-gaag-----a-----aatg-g-----------------------------
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90749484 16 - 130317789 ------------aag-gaa-gaag-----a-----aata-g-----------------------------
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              3929 40 +     14296 c-c-gcctctgaggg-gag-a--g-----g-----gaag-c--ta---aa--g-a-ctg-a-a--ttcaa
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               298759 38 -  14710649 t-g-atctct---ga-gag-g--g-g---a-----gaag-ggctg---gg--g-g-tta-a-g--ttc--
i Mustela_putorius.JH418006.1                            C 0 C 0
s Nasalis_larvatus.k141_413338                               11648 41 +     21681 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-tgg-a-g--ttcaa
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    757446 35 +    783361 t-g-atctctg--ga-gag-g--g-----g-----a----g--ct---ga--g-g-att-a-g--cccaa
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9147063 38 -   9404916 t-g-atctctg--ga-gag-g--g-g---a-----gagg-ggct----gg--g-g-tta-a-g--ttt--
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102576388 46 - 196305487 c-t-acctctgagaaaggg-a--gaggaca-----gggt-c--tg---gg--g-a-ttg-a-g--ttcaa
i Nycticebus_bengalensis.LG01                            I 5 C 0
s Nycticebus_coucang.k141_5327727                             4074 46 +      8486 c-t-acctctgagaaaggg-a--gaggaca-----gggt-c--tg---gg--g-a-ttg-a-g--ttcaa
i Nycticebus_coucang.k141_5327727                        I 5 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105746815 46 + 199412804 c-t-acctctgagaaaggg-a--gaggaca-----gggt-c--tg---gg--g-a-ttg-a-g--ttcaa
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 5 C 0
s Odobenus_rosmarus.KB229312.1                              504145 39 -   2017862 t-g-atctctg--ga-gag-g--g-g---a-----gaca-ggcta---gg--g-g-tta-a-g--ttc--
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   21186 16 +     28053 ------------agg-aag-gagg-----a-----aaag-g-----------------------------
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    76638 16 +    102263 ------------agg-gag-gaag-----a-----aaag-g-----------------------------
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       459817 38 -    559221 t-g-atctctg--ga-gag-g--g-g---a-----gagg-ggct----gg--g-g-tta-a-g--ttt--
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Pan_paniscus.KQ411613.1                                    40573 41 +     80009 C-T-ACCTCTGAAaaggga-a--g-----a-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.KZ622849.1                                 18752 41 +    110857 C-T-ACCTCTGaaaaggga-a--g-----a-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Pan_troglodytes.KZ622849.1                             I 100 I 507
s Panthera_onca.PanOnc_flattened_line_3271                  148738 39 +    230217 t-g-atctctg--ga-aag-g--t-g---a-----gaca-tgctg---gg--g-g-tta-a-g--ttt--
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                261945 39 +  18783137 t-g-atctctg--ga-aag-g--t-g---a-----gaca-tgctg---gg--g-g-tta-a-g--ttt--
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4718581 39 -   8748460 t-g-atctctg--ga-aag-g--t-g---a-----gaca-tgctg---gg--g-g-tta-a-g--ttt--
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183439685 41 + 183742232 C-T-ACCTCTGAAAAGGGA-A--G-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             3378 41 +     20448 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20560183 41 +  20919399 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   2121 41 +     41871 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     5407 41 +     27711 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  5486 41 +      9205 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10198 39 -     78924 t-g-atctctg--ga-gag-g--ta----a-----gaga-ggctg---gg--g-g-tta-a-g--ttc--
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            6582 46 +     13100 c-t-acctctgagaaaggg-a--gaggaca-----ggga-c--tg---ga--c-a-ttg-a-g--ttcaa
i Perodicticus_ibeanus.k141_855320                       I 5 C 0
s Perodicticus_potto.k141_1092580                             4955 46 +     25941 c-t-acctctgagaaaggg-a--gaggaca-----ggga-c--tg---ga--c-a-ttg-a-g--ttcaa
i Perodicticus_potto.k141_1092580                        I 5 C 0
s Peromyscus_maniculatus.KI615324.1                       18191237 16 -  18517816 ------------aga-gag-gaag-----g-----aaag-g-----------------------------
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Piliocolobus_badius.k141_1234363                           40161 41 +     62158 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        34883 41 +     89929 c-t-acctctgaaaaggga-a--g-----g-----aggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            36299 41 +     51399 c-t-acctctgaaaaggga-a--g-----g-----aggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14292537 41 -  14605196 C-T-ACCTCTGAAAAGGGA-A--G-----G-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189127607 41 + 189387572 c-t-acctctgaaaagaga-a--g-----a-----gggg-c--tg---ga--g-a-gtg-a-g--ttcaa
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9567215 41 +   9816681 c-t-acctctgaaaagaga-a--g-----a-----gggg-c--tg---ga--g-a-gtg-a-g--ttcaa
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               69811 41 -     81375 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              1631 41 +     19060 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2593862 41 -   4620579 C-T-ACCtctgggaaaggg-a--g-----a-----gggg-c--TA---GG--G-A-TTG-A-G--Ttcaa
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     987854 41 +   2598838 G-T-ACCtctgggaaaggg-a--g-----a-----gggg-c--TA---GG--G-A-TTG-G-G--TTCAA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          26165 41 +     38485 g-t-acctctgggaaaggg-a--g-----a-----gggg-c--ta---gg--g-a-ttg-g-g--ttcaa
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             2324 41 +      4256 g-t-acctctgggaaaggg-a--c-----a-----gggg-c--tg---gg--g-a-ttg-g-g--ttcaa
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          23684 41 +     35766 g-t-acctctgggaaaggg-a--c-----a-----gggg-c--tg---gg--g-a-ttg-g-g--ttcaa
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           1866 41 -     24134 g-t-acctctgggaaaggg-a--c-----a-----gggg-c--tg---gg--g-a-ttg-g-g--ttcaa
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        25679 41 -     67325 g-t-acctctgggaaaggg-a--g-----a-----gggg-c--tg---gg--g-a-ttg-g-g--ttcaa
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           1917 41 -      6182 g-t-acctctgggaaaggg-a--g-----a-----gggg-c--ta---gg--g-a-ttg-g-g--ttcaa
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             6966 16 -     21651 ------------aag-gag-gaag-----a-----aatg-g-----------------------------
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            12257 41 -     21811 t-g-atctctg--ga-gag-g--g-----gagagga----g--ct---ga--g-g-gtt-aaa--ttcag
i Pteronotus_parnellii.KE909381.1                        I 1 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         37777 38 +     42204 t-g-atctct---ga-gaa-g--g-g---a-----gaag-ggctg---gg--g-g-tta-a-g--ttc--
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Puma_concolor.QAVW01001104.1                            20271861 38 -  38429054 t-g-atttctg--g--aag-g--t-g---a-----gaca-tgcta---gg--g-g-tta-a-g--ttt--
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             11642 41 -     91421 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7605770 41 +   7812017 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11618 41 -     72585 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53567499 16 +  90668790 ------------AAG-GAG-GTAG-----A-----AGTG-G-----------------------------
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             3326 41 -     11128 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91232681 41 - 195417433 c-t-acctCTGAAAAGGGA-A--G-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7668330 41 +   7961872 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_2619299                               4539 41 -      8359 c-t-gcctctgaaaaggga-a--g-----a-----gggg-c--tg---ga--g-a-ttg-a-g--tttaa
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            10848 41 -     13588 c-t-gcctctgaaaaggga-a--g-----a-----gggg-c--tg---ga--g-a-ctg-a-g--tttaa
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              4484 41 -      6207 c-t-gcctctgaaaaggga-a--g-----a-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               10211 41 +     13640 c-t-gcctctgaaaaggga-a--g-----a-----gggg-c--tg---ga--g-a-ttg-a-g--tttaa
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               5074 41 +      8564 c-t-gcctctgaaaaggga-a--g-----a-----ggga-c--tg---ga--g-a-ttg-a-g--ttcaa
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209465352 41 + 209938924 c-t-gcctctgaaaaggga-a--g-----a-----gggg-c--tg---ga--g-a-ttg-a-g--tttaa
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 4564 41 -      9399 c-t-gcctctgaaaaggga-a--g-----a-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 1713 41 +      3421 c-t-gcctctgaaaaggga-a--g-----a-----gggg-c--tg---ga--g-a-ctg-a-g--tttaa
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119947912 41 - 121099817 c-t-gcctctgaaaaggga-a--g-----a-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       20379 41 +     46362 c-t-gcctctgaaaaggga-a--g-----a-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               20474 41 +     45824 c-t-gcctctgaaaaggga-a--g-----a-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             37089 41 -     64574 c-t-gcctctgaaaaggga-a--g-----a-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                                 95 41 -     23631 c-t-gcctctgaaaaggga-a--g-----a-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 20367 41 -     61129 c-t-gcctctgaaaaggga-a--g-----a-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          16154 41 -     19888 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      23356 41 +     39453 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            3882 41 +     27826 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             3403 41 -     19483 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      3465 41 +      7198 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         11725 41 +     15514 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    10661 15 -     12148 ------------agg-gag-gaag-----a-----a-ag-g-----------------------------
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            188787 41 -    191337 t-g-acctctg--ga-gaa-g--ga----a---gagcag-c--ta---ga--a-g-tta-a-g--ttcaa
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1949898 40 -   3870691 c-t-acctctgggaa-gaa-a--g-----a-----atgg-c--ta---ga--g-a-ttt-a-a--ttcaa
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             28302 39 +     97271 t-g-agctctg--ga-gag-g--g-g---a-----aagg-ggctg---gg--a-g-tta-a-g--ttc--
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              15863 28 -    196729 ----atccctg--aa-cag-g--t-g---a-----gaca-ggctg---gg--g-----------------
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 I 7
s Sus_scrofa.JH118708.1                                      32778 16 -     47482 t-g-acctctg--ga-gaa-g--g----------------------------------------------
i Sus_scrofa.JH118708.1                                  C 0 I 11
s Symphalangus_syndactylus.tarseq_199                      1089930 41 -   1523678 c-t-acctctgaaaaggga-a--g-----a-----gggg-c--tg---ga--g-a-gtg-a-g--ttcaa
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 8252 40 +     41958 t-g-a-ctctg--ga-gagag--g-----a-----ggggag--ct---ga--g-g-gttaa-c--ttcaa
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 62 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      116303 41 -    156842 t-g-acctcca--ga-cag-g-gg-----a-----gagg-ggctg---gg--g-g-tta-a-g--ttcaa
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    384753 41 +    539355 t-g-acctctg--ga-gag-g-gg-----a-----gagg-ggcta---gg--g-g-tta-a-g--ttcga
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               12251 35 +     70052 c-t-acctcca------gc-a--g-----a-----ggaa-c--tt---ga--a-a-tcg-a-a--ttcac
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               16556 35 +     25099 c-t-acctcca------gc-a--g-----a-----ggaa-c--tt---ga--a-a-tcg-a-a--ttcac
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186425050 41 + 186847797 C-T-ACCTCTGAAAAGGGA-A--G-----G-----GAGG-C--TG---GA--G-A-TTG-T-G--Ttcaa
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          7456 41 -     20410 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    11651 41 +     15221 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        7557 41 +     19930 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       3987 41 -     19997 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            44106 41 -     60166 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        11577 41 -     27529 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     11519 41 -     18194 c-t-acctctgaaaaggga-a--g-----g-----aggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           5254 41 -     21137 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    3957 41 -     10723 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         3109 41 +      9834 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        21424 41 +     32220 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5935524 41 +   6242583 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        4771 41 +     20839 c-t-acctctgaaaaggga-a--g-----g-----gggg-c--tg---ga--g-a-ttg-a-g--ttcaa
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2152014 41 +   4065304 c-t-gcctcttggcaagag-a--c-----t-----ggat-c--tg---aa--a-a-ttg-a-g--tttag
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     5333 43 -     10553 c-t-gtcttttggcaagag-a--t-----t-----ggat-c--tg---aaaaa-a-ttg-a-g--ttcaa
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4848021 39 -   5085361 t-g-acctctg--ga-gag-g--g-g---a-----gagg-ggctg---gg--g-g-tta-g-g--ttc--
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   8545 41 +     50397 c-t-acctctgggaaaggg-a--g-----a-----gggg-c--ta---gg--g-a-ttg-a-g--ttcaa
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              8600 41 +     24756 c-t-acctctgggaaaggg-a--g-----a-----gggg-c--ta---gg--g-a-ttg-a-g--ttcaa
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5369450 41 -   5488506 t-g-acctctg--ga-gaa-g--g-g-agg-----gagg-c--tg---gg--g-g-ata-a-c--ttcaa
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  8473 39 -     43706 t-g-atctctg--ga-gag-g--g-g---a-----gagg-ggct----gg--g-ggcta-a-g--ttt--
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        21277 40 -     24430 c-t-acctctgggaa-gag-a--g-----a-----aagg-c--ta---ga--g-a-tct-a-a--ttcaa
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          2712 39 +     86975 t-g-atctctg--ga-gag-g--g-g---a-----gaca-ggcta---gg--g-g-tta-a-g--ttc--
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519  0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188  0 +      1777 C
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      11935  1 +     63895 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383  9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   2809  0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 70244  0 +    116680 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                85637 14 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Pteropus_vampyrus.KN525825.1                             1357734 14 +   4952924 I
e Pteropus_alecto.KB030862.1                              22974644 14 +  28871421 I
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1359517  0 +   3988456 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186890  0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Megaderma_lyra.MegLyr_scaffold_4542                         8178  0 -    207569 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 88455  4 +     94391 I
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8272963  1 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_29171               41045  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       109621  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Eidolon_helvum.KE759718.1                                   8374  9 +     11740 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            61949  0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          11837  0 -     20389 C
e Condylura_cristata.JH655891.1                           17547132  5 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            171068  0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15969  0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            5641  0 -      6351 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     66596  1 -     89534 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       3262 25 +     62944 tcaccaa----t-ggttaataat----ttga--t-ca
s Acinonyx_jubatus.LLWD01001279.1                           824903 20 -   1699592 -----ag----t-caccaatgat----gtca--t-ct
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 1
s Ailuropoda_melanoleuca.LNAT01000098.1                    9508146 20 -  29979442 -----aa----t-caccaatgat----ataa--t-ct
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 3 I 1
s Ailurus_fulgens.LNAC01001112.1                             76929 20 -    347723 -----aa----t-caccaatgat----gtaa--t-ct
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 1
s Allenopithecus_nigroviridis.k141_3361533                   11192 25 -     52922 tcaccaa----t-ggtcaataat----ttga--t-ca
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         11126 25 -     28001 tcaccaa----t-ggtcaataat----ttga--t-ca
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          1572 25 -     18505 tcaccaa----t-ggtcaataat----ttga--t-ca
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           2421 25 -     12518 tcaccaa----t-ggtcaataat----ttga--t-ca
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_2038611                             23549 25 +     24414 tcaccaa----t-ggtcaatgct----ttga--t-cc
i Alouatta_belzebul.k141_2038611                         C 0 C 0
s Alouatta_caraya.k141_885645                                54310 25 +     54689 tcaccaa----t-ggtcaatgct----ttga--t-ca
i Alouatta_caraya.k141_885645                            C 0 C 0
s Alouatta_discolor.k141_2852575                            124899 25 +    125349 tcaccaa----t-ggtcaatgct----ttga--t-cc
i Alouatta_discolor.k141_2852575                         C 0 C 0
s Alouatta_juara.k141_1509701                                21244 25 +     25266 tcaccaa----t-ggtcaatgct----ttga--t-ca
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                            686 25 +      2906 tcaccaa----t-ggtcaatgct----ttga--t-ca
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            14799 25 -     18578 tcaccaa----t-ggtcaatgct----ttga--t-ca
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_668256                              17503 25 +     18088 tcaccaa----t-ggtcaatgct----ttga--t-ca
i Alouatta_palliata.k141_668256                          C 0 C 0
s Alouatta_puruensis.k141_1766044                            18554 25 -     18677 tcaccaa----t-ggtcaatgct----ttga--t-ca
i Alouatta_puruensis.k141_1766044                        C 0 C 0
s Alouatta_seniculus.k141_117119                             11536 25 +     50774 tcaccaa----t-ggtcaatgct----ttga--t-ca
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  12166 25 -     33861 tcaccaa----t-ggtcaatact----ttga--t-ca
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            12187 25 -     34016 tcaccaa----t-ggtcaatact----ttga--t-ca
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4294582 25 -   5030052 TCACCAA----T-GGTCAATACT----TTGA--T-CA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             12188 25 -     34685 tcaccaa----t-ggtcaatact----ttga--t-ca
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               25309 25 -     47192 tcaccaa----t-ggtcaatact----ttga--t-ca
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       8796 29 +     20879 tcatcaacaaac-ggccaaatat----ttga--t-ca
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        16395 25 +     17124 tcaccaa----tag-ccaataac----ttga--t-ca
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Avahi_laniger.k141_765380                                  50843 25 -     92717 tcaccaa----t-ggccaataat----ttga--t-ca
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              51472 25 +     85213 tcaccaa----t-ggccaataat----ttga--t-ca
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             1923 25 -     10423 tcaccaa----t-ggtcaatgct----ttga--t-ca
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             21410 25 +     31915 tcaccaa----t-ggtcaatact----ttga--t-ca
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            1890 25 +      5267 tcaccaa----t-ggtcaatgct----ttga--t-ca
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23587102 25 - 189096842 tcaccaa----t-ggtcaatgct----ttga--t-ca
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              8634 25 -     12001 tcaccaa----t-ggtcaatgct----ttga--t-ca
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                            9999991 25 -  17673402 tagccaa----t-ggccaatgat----ttaa--t-ct
i Camelus_bactrianus.KN276810.1                          C 0 I 1
s Camelus_dromedarius.KN272107.1                           2332455 25 -   7040546 tagccaa----t-ggccaatgat----ttaa--t-ct
i Camelus_dromedarius.KN272107.1                         C 0 I 1
s Camelus_ferus.KB017975.1                                  400731 25 -   1652518 tagccaa----t-ggccaatgat----ttaa--t-ct
i Camelus_ferus.KB017975.1                               C 0 I 1
s CanFam4.chr16                                           17796892 20 -  60362399 -----aa----t-caccagtgat----gtaa--t-ct
i CanFam4.chr16                                          C 0 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182949 20 -    185531 -----aa----t-caccagtgat----gtaa--t-ct
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 I 1
s Canis_lupus_dingo.QKWQ01000480.1                         9032335 20 -   9314153 -----aa----t-caccagtgat----gtaa--t-ct
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 1
s Canis_lupus_familiaris.chr16                            17956600 20 -  59632846 -----aa----t-caccagtgat----gtaa--t-ct
i Canis_lupus_familiaris.chr16                           C 0 I 1
s Canis_lupus_orion.HG994398.1                            18497900 20 +  63665305 -----aa----t-caccagtgat----gtaa--t-ct
i Canis_lupus_orion.HG994398.1                           C 0 I 1
s Carlito_syrichta.NW_007259797.1                           142648 24 -    496798 TCACCAG----C-AG-caataat----ttga--t-ta
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    135263 24 +    179628 tcaccag----t-ggccaatgat----ttga--t--a
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     90304 22 +    217609 tcgccaa----t-ggccaatgat----ttaa------
i Catagonus_wagneri.CatWag_scaffold_2839                 I 11 C 0
s Cebuella_niveiventris.k141_1251222                          6543 25 -     11392 tcaccaa----t-ggtcaatact----ttga--t-ca
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               2641 25 -      7577 tcaccaa----t-ggtcaatact----ttga--t-ca
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         6557 24 -      8605 tcaccaa----c-ag-caataat----ttga--t-ta
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12229008 25 +  27778364 ccaccaa----t-aaccaatgat----tcaa--t-ca
i Ceratotherium_simum.JH767749.1                         C 0 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634             35 25 -     25243 ccaccaa----t-aaccaatgat----tcaa--t-ca
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 I 1
s Cercocebus_atys.KQ010504.1                               4472152 25 +   4669795 TCACCAA----T-GGTCAATAAT----TTGA--T-CA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        10699 25 -     19203 tcaccaa----t-ggtcaataat----ttga--t-ca
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           5121 25 +      8260 tcaccaa----t-ggtcaataat----ttga--t-ca
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           5348 25 +     27781 tcaccaa----t-ggtcaataat----ttga--t-ca
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         5503 25 -     20310 tcaccga----t-ggtcaataat----ttga--t-ca
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           8487 25 +     29689 tcaccga----t-ggtcaataat----ttga--t-ca
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            2915 25 +      9989 tcaccaa----t-ggtcaataat----ttga--t-ca
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          11164 25 -     27936 tcaccag----t-ggtcaataat----ttga--t-ca
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                            11194 25 -     11289 tcaccga----t-ggtcaataat----ttga--t-ca
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38813569 25 +  39242232 tcaccaa----t-ggtcaataat----ttga--t-ca
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21219265 25 -  21565898 tcaccga----t-ggtcaataat----ttga--t-ca
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       36384 25 -     53127 tcaccaa----t-ggtcaataat----ttga--t-ca
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        3670 25 +      7159 tcaccaa----t-ggtcaataat----ttga--t-ca
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       11187 25 -     27947 tcaccga----t-ggtcaataat----ttga--t-ca
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         11163 25 +     17596 tcaccga----t-ggtcaataat----ttga--t-ca
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                           385 25 +     26000 tcaccaa----t-ggtcaataat----ttga--t-ca
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             18263 25 -     52598 tcaccaa----t-ggccaataag----ttga--t-ca
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           13612 25 +     57038 tcaccaa----t-ggccagtaag----ttga--t-ca
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           7555 25 +     11226 ccaccaa----t-ggtcaatact----ttga--t-ca
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18425125 25 -  18827391 tcaccaa----t-ggtcaataat----ttga--t-ca
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       11566 25 -     50209 tcaccaa----t-ggtcaataat----ttga--t-ca
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135418572 25 + 135778131 TCACCAA----T-GGTCAATAAT----TTGA--T-CA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1907086 25 +   2368649 TCACCAA----T-GGTCAATAAT----TTGA--T-CA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199946758 25 + 200372422 tcaccaa----t-ggtcaataat----ttga--t-ca
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              33630 25 +     84244 tcaccaa----t-ggtcaataat----ttga--t-ca
i Colobus_polykomos.k141_906115                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_807070              1106 26 +      1402 ttatcaa----g-ggctaatgat----gtgg--tcaa
i Crocidura_indochinensis.CroInd_scaffold_807070         C 0 n 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             26067 20 -     87169 -----ag----t-caccaatgat----gtca--t-cc
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 1
s Ctenodactylus_gundi.CteGun_scaffold_65                    834348 21 +   1526836 tagccaa----t-ggc----aat----ttta--t-ca
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12534434 25 -  12879189 tcaccaa----t-ggctaataat----ttga--t-ca
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  670860 25 +   1390856 ccaccaa----t-aaccaatgat----tcaa--t-ca
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 1
s Diceros_bicornis.DicBicMic_scaffold_5955                    3616 25 +    198055 ccaccaa----t-aaccaatgat----tcaa--t-ca
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 1
s Enhydra_lutris.KZ291758.1                               16326908 20 -  41312741 -----aa----t-caccaatgat----gtaa--t-ct
i Enhydra_lutris.KZ291758.1                              C 0 I 1
s Equus_asinus.JREZ01000139.1                              1280909 25 +   4378816 ctatcaa----t-agccaatgat----ttaa--t-ca
i Equus_asinus.JREZ01000139.1                            I 7 I 1
s Equus_caballus.CM000403.2                               18528729 25 -  39960074 ctatcaa----t-agccaatgat----ttaa--t-ca
i Equus_caballus.CM000403.2                              I 7 I 1
s Equus_przewalskii.KK951119.1                               30744 25 +    498745 ctatcaa----t-agccaattat----ttaa--t-ca
i Equus_przewalskii.KK951119.1                           I 7 I 1
s Erythrocebus_patas.Contig38                             21201767 25 -  21539334 tcaccaa----t-ggtcaataat----ttga--t-ca
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              10948 25 -     14127 tcaccaa----t-agccaataat----ctga--t-ca
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                3646 25 -     16928 tcaccaa----t-agccaataat----ctga--t-ca
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              12679 25 -     25546 tcaccaa----t-agccaataat----ctga--t-ca
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             9864 25 +     26330 tcaccaa----t-agccaataat----ctga--t-ca
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 11112 25 +     23973 tcaccaa----t-agccaataat----ctga--t-ca
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 9864 25 +     75513 tcaccaa----t-agccaataat----ctga--t-ca
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  7815 25 +     97555 tcaccaa----t-agccaataat----ctga--t-ca
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            10743 25 +     26496 tcaccaa----t-agccaataat----ctga--t-ca
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  1348 25 -     17153 tcaccaa----t-agccaataat----ctga--t-ca
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              10924 25 +    111500 tcaccaa----t-agccaataat----ctga--t-ca
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20234769 20 + 206538554 -----ag----t-caccaatgat----gtca--t-ct
i Felis_catus.CM001381.2                                 C 0 I 1
s Felis_catus_fca126.CM031415.1                           20193613 20 + 205367284 -----ag----t-caccaatgat----gtca--t-ct
i Felis_catus_fca126.CM031415.1                          C 0 I 1
s Felis_nigripes.FelNig_flattened_line_20823                  7125 20 -     36744 -----ag----t-caccaatgat----gtca--t-ct
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 1
s Galagoides_demidoff.k141_1959596                            3576 22 +      6795 --accaa----t-g-cccacacc----tagt--t-ca
i Galagoides_demidoff.k141_1959596                       N 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_266699               1412 25 +      2098 tcaccta----t-ggccaatagt----ttga--t-ca
i Galeopterus_variegatus.GalVar_scaffold_266699          C 0 C 0
s Gorilla_beringei.k141_3596273                              12496 25 -     32273 tcaccaa----t-ggtcaataat----ttga--t-ca
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186334644 25 + 186649187 tcaccaa----t-ggtcaataat----ttga--t-ca
i Gorilla_gorilla.LT578341.1                             I 139 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   31715 28 +     78134 tcac-agtgaat-ggccaatgat----ttaa--t-ca
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           4005 25 -     19426 tcaccaa----t-ggccaataat----ctga--t-ca
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              9149 25 -     15286 tcaccaa----t-ggccaataat----ctga--t-ca
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             10787 25 +     18253 tcaccaa----t-ggacaataat----ctga--t-ca
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         10890 25 -     41752 tcaccaa----t-ggacaataat----ctga--t-ca
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         10723 25 -     16460 tcaccaa----t-ggccaataat----ctga--t-ca
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               239901 20 +    327341 -----ag----t-caccaatgat----gtca--t-ct
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 1
s Hoolock_leuconedys.ctg274                                    431339 25 +    630532 tcaccaa----t-ggtcaataat----ttga--t-ca
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  42053 20 +     55795 -----ac----t-catcgatgat----atca--t-ct
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 1
s Hylobates_agilis.k141_307679                               14273 25 -     15490 tcaccaa----t-ggtcaataat----ttga--t-ca
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              56279 25 +     67168 tcaccaa----t-ggtcaataat----ttga--t-ca
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189539929 25 - 191637585 tcaccaa----t-ggtcaataat----ttga--t-ca
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3332822 25 -  11177569 tcaccaa----t-ggtcaataat----ttga--t-ca
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7516854 25 -   7955117 tcatca--a--a-ggccaaatat----tcga--t-ca
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   19697 25 +     31101 tcaccaa----t-ggccaataat----ttga--t-ca
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15521252 25 -  30322482 tcaccaa----t-ggccaataat----ctga--t-ca
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        4324 25 +     64341 tcaccaa----t-ggtcaatact----ttga--t-ca
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           1384 25 +      4941 tcaccaa----t-ggtcaatact----ttga--t-ca
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4252 25 +     35603 tcaccaa----t-ggtcaatact----ttga--t-ca
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    25681 24 +     38576 tcaccag----t-ggtcaatac-----ttga--t-ca
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         22378 24 +     66356 tcaccag----t-ggtcaatac-----ttga--t-ca
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          8147 25 -     23766 ttaccaa----a-ggccaataat----ttga--t-ca
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             26094 25 +     45836 tcaccaa----a-ggccaataat----ttga--t-ca
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_320948                           377 25 -      1719 tcaccga----t-ggccaataat----ttga--t-ca
i Lepilemur_ruficaudatus.k141_320948                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      24149 25 +     54090 tcaccaa----a-ggccaataat----ttga--t-ca
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3040041 20 +   3914936 -----aa----t-caccaatgat----gtaa--t-ct
i Leptonychotes_weddellii.KB714746.1                     C 0 I 1
s Lophocebus_aterrimus.ctg367                              1433697 25 +   1826925 tcaccaa----t-ggtcaataat----ttca--t-ca
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            2620 25 +     11245 tcaccaa----tgg-ccaataac----ttga--t-ca
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1001457 25 +   6120653 tcaccaa----tgg-ccaataac----ttga--t-ca
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17952840 20 -  59628241 -----aa----t-caccagtgat----gtaa--t-ct
i Lycaon_pictus.CM007581.1                               C 0 I 1
s Macaca_arctoides.k141_2326796                               3518 25 +     40492 tcaccaa----t-ggtcaataat----ttga--t-ca
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59672772 25 +  60120075 tcaccaa----t-ggtcagtaat----ttga--t-ca
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  9274 25 -     26193 tcaccaa----t-ggtcaataat----ttga--c-ca
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            77070 25 -    114318 tcaccaa----t-ggtcaataat----ttga--t-ca
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  2785 25 -     23192 tcaccaa----t-ggtcaataat----ttga--t-ca
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                12237 25 -     29190 tcaccaa----t-ggtcaataat----ttga--t-ca
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  20805 25 +     37952 tcaccaa----t-ggtcaataat----ttga--t-ca
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186835893 25 + 187317192 tcaccaa----t-ggtcaataat----ttga--t-ca
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25454456 25 -  25927173 tcaccaa----t-ggtcaataat----ttga--t-ca
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  76654 25 +     89720 tcaccaa----t-ggtcaataat----ttga--t-ca
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 3651 25 +     20474 tcaccaa----t-ggtcaataat----ttga--t-ca
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   3453 25 -     14993 tcaccaa----t-ggtcaataat----ttga--t-ca
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  326323 25 -    668171 tcaccaa----t-ggtcaataat----ttga--t-ca
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 1755 25 -     24072 tcaccaa----t-ggtcaataat----ttga--t-ca
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               22392 25 -     45290 tcaccaa----t-ggtcaataat----ttga--t-ca
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23933940 25 -  24302211 tcaccaa----t-ggtcaataat----ttga--t-ca
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               348116 25 +    752769 tcaccaa----t-ggtcaataat----ttga--t-ca
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              17058 23 +    737560 --atcag----t-gaccagaaat----gtta--t-ct
i Manis_javanica.JSZB01003497.1                          C 0 I 1
s Manis_pentadactyla.KN006162.1                              48443 23 -    317179 --atcag----t-gaccagaaat----gtta--t-ct
i Manis_pentadactyla.KN006162.1                          C 0 I 1
s Marmota_marmota.CZRN01000018.1                          33099166 25 -  40650429 tcacca--a--a-ggccaaatat----tcga--t-ca
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              7616 20 +     13704 -----aa----t-cactaatgat----gtaa--t-ct
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 1
s Mico_argentatus.k141_1239457                                2469 25 -      7380 tcaccaa----t-ggtcaatgct----ttga--t-ca
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               1539 25 +     18990 tcaccaa----t-ggtcaatgct----ttga--t-ca
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      2474 25 -      7356 tcaccaa----t-ggtcaatgct----ttga--t-ca
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18288638 25 -  93316391 tcaccaa----t-ggccaataag----ttga--t-ca
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_534055                           5693 25 -     28506 tcaccca----t-ggtcaataat----ttga--t-ca
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         2878 20 -      8324 -----aa----t-caccaatgat----gtaa--t-ct
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 1
s Mirza_zaza.k141_952172                                      6208 25 -     37649 tcaccaa----t-ggccaataag----ttga--t-ca
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138904 24 -    366855 tca-caa----t-ggccaaggat----ttaa--t-ca
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 1
s Mungos_mungo.MunMun_flattened_line_23663                   33004 20 +     37127 -----ag----t-caccaatgat----gtca--t-ct
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 1
s Muscardinus_avellanarius.MusAve_scaffold_82313              3969 29 +     14296 taaccaatgagt-ggccagttat----ttga--t-ca
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               298797 20 -  14710649 -----aa----t-caccaatgat----gtaa--t-ct
i Mustela_putorius.JH418006.1                            C 0 I 1
s Nasalis_larvatus.k141_413338                               11689 25 +     21681 tcaccaa----t-ggtcaataat----ttga--c-ca
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    757481 29 +    783361 tccgcag----t-ggtcacgcattcattcaa--t-ca
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 1
s Nyctereutes_procyonoides.CAJHUB010000658.1               9147101 20 -   9404916 -----aa----t-caccagtgat----gtaa--t-ct
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 1
s Nycticebus_bengalensis.LG01                            102576434 25 - 196305487 tcaccaa----tgg-ccaataat----ttga--t-ca
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             4120 25 +      8486 tcaccaa----tgg-ccaataat----ttga--t-ca
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105746861 25 + 199412804 tcaccaa----tgg-ccaataac----ttga--t-ca
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1359517 18 +   3988456 -----------t-ggccaaatct----ttga--c-ca
i Ochotona_princeps.JH802162.1                           C 0 I 487
s Odobenus_rosmarus.KB229312.1                              504184 20 -   2017862 -----aa----t-caccaatgat----gtaa--c-ct
i Odobenus_rosmarus.KB229312.1                           C 0 I 1
s Otocyon_megalotis.JAEUCK010005147.1                       459855 20 -    559221 -----aa----t-caccagtgat----gtaa--t-ct
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 1
s Pan_paniscus.KQ411613.1                                    40614 25 +     80009 tCACCAA----T-GGTCAATAAT----TTGA--T-CA
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189139506 25 + 189151597 TCACCAA----T-GGTCAATAAT----TTGA--T-CA
i Pan_troglodytes.CM009242.2                             I 86 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  148777 20 +    230217 -----ag----t-caccaatgat----gtca--t-ct
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 1
s Panthera_pardus.KV860321.1                                261984 20 +  18783137 -----ag----t-caccaattat----gtca--t-ct
i Panthera_pardus.KV860321.1                             C 0 I 1
s Panthera_tigris.KE722367.1                               4718620 20 -   8748460 -----ag----t-caccaatgat----gtca--t-ct
i Panthera_tigris.KE722367.1                             C 0 I 1
s Papio_anubis.CM001495.2                                183439726 25 + 183742232 TCACCAA----T-GGTCAATAAT----TTCA--T-CA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             3419 25 +     20448 tcaccaa----t-ggtcaataat----ttca--t-ca
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20560224 25 +  20919399 tcaccaa----t-ggtcaataat----ttca--t-ca
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   2162 25 +     41871 tcaccaa----t-ggtcaataat----ttca--t-ca
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     5448 25 +     27711 tcaccaa----t-ggtcaataat----ttca--t-ca
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  5527 25 +      9205 tcaccaa----t-ggtcaataat----ttca--t-ca
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10237 20 -     78924 -----ag----t-caccaatgat----ataa--c-ct
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 1
s Perodicticus_ibeanus.k141_855320                            6628 25 +     13100 tcaccaa----tag-ccaataac----ttga--t-ca
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             5001 25 +     25941 tcaccaa----tag-ccaataac----ttga--t-cg
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Piliocolobus_badius.k141_1234363                           40202 25 +     62158 tcaccaa----t-ggtcaataat----ttga--t-cc
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        34924 25 +     89929 tcaccaa----t-ggtcaataat----ttga--t-cc
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            36340 25 +     51399 tcaccaa----t-ggtcaataat----ttga--t-cc
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14292578 25 -  14605196 TCACCAA----T-GGTCAATAAT----TTGA--T-CC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189127648 25 + 189387572 tcaccaa----t-ggtcaataat----ttga--t-ca
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9567256 25 +   9816681 tcaccaa----t-ggtcaataat----ttga--t-ca
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               69852 25 -     81375 tcaccaa----t-ggtcaataat----ttga--t-ca
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              1672 25 +     19060 tcaccaa----t-ggtcaataat----ttga--t-ca
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2593903 25 -   4620579 tcaccaa----t-ggccaataat----ctga--t-ca
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     987895 25 +   2598838 TCACCAG----T-GGCCAGTAAT----Ttga--t-ca
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          26206 25 +     38485 tcaccag----t-ggccagtaat----ttga--t-ca
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             2365 25 +      4256 tcaccaa----t-ggccagtagt----ttga--t-ca
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          23725 25 +     35766 tcaccaa----t-ggccagtagt----ttga--t-ca
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           1907 25 -     24134 tcaccaa----t-ggccagtagt----ttga--t-ca
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        25720 25 -     67325 tcaccaa----t-ggccagtagt----ttga--t-ca
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           1958 25 -      6182 tcaccag----t-ggccagtaat----ttga--t-ca
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            12298 25 -     21811 tcaccaa----t-ggccaaggat----gtaa--t-cc
i Pteronotus_parnellii.KE909381.1                        C 0 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_31117         37815 20 +     42204 -----aa----t-caccaatgat----gtaa--t-ct
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 1
s Puma_concolor.QAVW01001104.1                            20271899 20 -  38429054 -----ag----t-caccaatgat----gtca--t-ct
i Puma_concolor.QAVW01001104.1                           C 0 I 1
s Pygathrix_cinerea.k141_1153803                             11683 25 -     91421 tcaccaa----t-ggtcaataat----ttga--t-ca
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7605811 25 +   7812017 tcaccaa----t-ggtcaataat----ttga--t-ca
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11659 25 -     72585 tcaccaa----t-ggtcaataat----ttga--t-ca
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             3367 25 -     11128 tcaccaa----t-ggtcaataat----ttga--t-ca
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91232722 25 - 195417433 TCACCAA----T-GGTCAATAAT----TTGA--T-CA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7668371 25 +   7961872 tcaccaa----t-ggtcaataat----ttga--t-ca
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_2619299                               4580 25 -      8359 ccaccaa----t-ggtcaatact----ttga--t-ca
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            10889 25 -     13588 tcaccaa----t-ggtcaatact----ttga--t-ca
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              4525 25 -      6207 tcaccaa----t-ggtcaatact----ttga--t-ca
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               10252 25 +     13640 tcaccaa----t-ggtcaatact----ttga--t-ca
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               5115 25 +      8564 tcaccaa----t-ggtcaatact----ttga--t-ca
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209465393 25 + 209938924 ccaccaa----t-ggtcaatact----ttga--t-ca
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 4605 25 -      9399 tcaccaa----t-ggtcaatact----ttga--t-ca
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 1754 25 +      3421 tcaccaa----t-ggtcaatact----ttga--t-ca
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119947953 25 - 121099817 tcaccaa----t-ggtcaatact----ttga--t-cc
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       20420 25 +     46362 tcaccga----t-ggtcaatact----ttga--t-cc
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               20515 25 +     45824 tcaccga----t-ggtcaatact----ttga--t-cc
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             37130 25 -     64574 tcaccga----t-ggtcaatact----ttga--t-cc
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                                136 25 -     23631 tcaccga----t-ggtcaatact----ttga--t-cc
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 20408 25 -     61129 tcaccga----t-ggtcaatact----ttga--t-cc
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          16195 25 -     19888 tcaccaa----t-ggtcaataat----ttga--t-ca
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      23397 25 +     39453 tcaccaa----t-ggtcaataat----ttga--t-ca
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            3923 25 +     27826 tcaccaa----t-ggtcaataat----ttga--t-ca
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             3444 25 -     19483 tcaccaa----t-ggtcaataat----ttga--t-ca
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      3506 25 +      7198 tcaccaa----t-ggtcaataat----ttga--t-ca
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         11766 25 +     15514 tcaccaa----t-ggtcaataat----ttga--t-ca
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            188828 24 -    191337 ttactag----t-ggccaatgtc----ttaa--t-c-
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1949938 25 -   3870691 tcatca--a--a-ggccaaatat----tcga--t-ca
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             28341 20 +     97271 -----aa----t-caccaatgac----ataa--t-ct
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 1
s Suricata_suricatta.SurSur_flattened_line_6629              15898 20 -    196729 -----ag----t-caccaatgat----gtca--t-ct
i Suricata_suricatta.SurSur_flattened_line_6629          I 7 I 1
s Sus_scrofa.JH118708.1                                      32805 25 -     47482 ttgccaa----t-ggccaatgat----ttaa--t-ca
i Sus_scrofa.JH118708.1                                  I 11 I 3
s Symphalangus_syndactylus.tarseq_199                      1089971 25 -   1523678 tcaccaa----t-ggtcaataat----ttga--t-ca
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 8292 25 +     41958 tcaccga----t-ggccaatgat----ttaa--t-ca
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 1
s Tapirus_indicus.TapInd_scaffold_9301                      116344 25 -    156842 ccaccaa----t-aaccaatgat----tcaa--t-ca
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 1
s Tapirus_terrestris.TapTer_scaffold_755                    384794 25 +    539355 caaccaa----t-aaccaatgat----tcaa--t-ca
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 1
s Tarsius_lariang.k141_2201908                               12286 24 +     70052 tcaccaa----t-ag-caataac----ttga--t-ca
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               16591 24 +     25099 tcaccaa----t-ag-caataac----ttga--t-ca
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186425091 25 + 186847797 tcaccaa----t-ggtcaataat----ttca--t-cc
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          7497 25 -     20410 tcaccaa----t-ggtcaataat----ttga--t-ca
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    11692 25 +     15221 tcaccaa----t-ggtcaataat----ttga--t-ca
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        7598 25 +     19930 tcaccaa----t-ggtcaataat----ttga--t-ca
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       4028 25 -     19997 tcaccaa----t-ggtcaataat----ttga--t-ca
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            44147 25 -     60166 tcaccaa----t-ggtcaataat----ttga--t-ca
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        11618 25 -     27529 tcaccaa----t-ggtcaataat----ttga--t-ca
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     11560 25 -     18194 tcaccaa----t-ggtcaataat----ttga--t-ca
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           5295 25 -     21137 tcaccaa----t-ggtcaataat----ttga--t-ca
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    3998 25 -     10723 tcaccaa----t-ggtcaataat----ttga--t-ca
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         3150 25 +      9834 tcaccaa----t-ggtcaataat----ttga--t-ca
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        21465 25 +     32220 tcaccaa----t-ggtcaataat----ttga--t-ca
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5935565 25 +   6242583 tcaccaa----t-ggtcaataat----ttga--t-ca
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        4812 25 +     20839 tcaccaa----t-ggtcaataat----ttga--t-ca
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2152055 25 +   4065304 tctccaa----t-ggccaataat----ttga--t-cc
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     5376 23 -     10553 tctccaa----t-gaccaataat----atga--t---
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 1
s Ursus_maritimus.KK499267.1                               4848060 20 -   5085361 -----aa----t-caccagtgat----ataa--t-ct
i Ursus_maritimus.KK499267.1                             C 0 I 1
s Varecia_rubra.k141_590885                                   8586 25 +     50397 tcaccaa----t-ggccaataat----ctga--t-ca
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              8641 25 +     24756 tcaccaa----t-ggccaataat----ctga--t-ca
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5369491 25 -   5488506 tagctaa----t-ggccaatgat----ttaa--t-ct
i Vicugna_pacos.KN270157.1                               C 0 I 1
s Vulpes_lagopus.VulLag_flattened_line_30954                  8512 20 -     43706 -----aa----t-caccagtgat----gtaa--t-ct
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 1
s Xerus_inauris.XerIna_scaffold_48378                        21317 25 -     24430 tcacca--a--t-ggccaaatat----ttga--t-ca
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          2751 20 +     86975 -----aa----t-caccaatgat----gtaa--t-ct
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 1
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519  0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188  0 +      1777 C
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Mus_pahari.LT608297.1                                   31351706  0 -  89631738 C
e Mus_spretus.CM004101.1                                  90749500  0 - 130317789 C
e Mus_musculus.chr8                                       87647421  0 - 129401213 C
e Mus_caroli.LT608237.1                                   84358433  0 - 120012414 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      11935  1 +     63895 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383  9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   2809  0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 70244  0 +    116680 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    10676  0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                85637 14 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rattus_norvegicus.chr16                                 53567515  0 +  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Pteropus_vampyrus.KN525825.1                             1357734 14 +   4952924 I
e Pteropus_alecto.KB030862.1                              22974644 14 +  28871421 I
e Psammomys_obesus.NESX01036370.1                             6982  0 -     21651 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18191253  0 -  18517816 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Oryctolagus_cuniculus.CM000791.1                        67144556  0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    76654  0 +    102263 C
e Ondatra_zibethicus.OndZib_scaffold_46174                   21202  0 +     28053 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186890  0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11257107  0 -  27267610 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12179856  0 -  29670104 C
e Meriones_unguiculatus.MerUng_scaffold_7390                 29331  0 +    140813 C
e Megaderma_lyra.MegLyr_scaffold_4542                         8178  0 -    207569 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 88455  4 +     94391 I
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3712  0 -     14121 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8272963  1 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_29171               41045  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       109621  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Ellobius_talpinus.LOJH01109367.1                            3007  0 -      6299 C
e Ellobius_lutescens.LOEQ01008920.1                          16953  0 -    110024 C
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Eidolon_helvum.KE759718.1                                   8374  9 +     11740 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            61949  0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Cricetulus_griseus.LT883664.1                           11664758  8 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 47433  0 +     63868 C
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          11837  0 -     20389 C
e Condylura_cristata.JH655891.1                           17547132  5 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            171068  0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15969  0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            5641  0 -      6351 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     66596  1 -     89534 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     67723  0 +     87051 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       3287  9 +     62944 at---tat-gc-ta
s Acinonyx_jubatus.LLWD01001279.1                           824924  9 -   1699592 -t---cat-gccaa
i Acinonyx_jubatus.LLWD01001279.1                        I 1 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9508167  9 -  29979442 -c---cat-gccaa
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 1 C 0
s Ailurus_fulgens.LNAC01001112.1                             76950  9 -    347723 -c---cat-gccaa
i Ailurus_fulgens.LNAC01001112.1                         I 1 C 0
s Allenopithecus_nigroviridis.k141_3361533                   11217  9 -     52922 tt---tat-gc-ta
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         11151  9 -     28001 at---tat-gc-ta
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          1597  9 -     18505 at---tat-gc-ta
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           2446  9 -     12518 at---tat-gc-ta
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_2038611                             23574  9 +     24414 at---tat-gc-tg
i Alouatta_belzebul.k141_2038611                         C 0 C 0
s Alouatta_caraya.k141_885645                                54335  9 +     54689 at---tat-gc-tg
i Alouatta_caraya.k141_885645                            C 0 C 0
s Alouatta_discolor.k141_2852575                            124924  9 +    125349 at---tat-gc-tg
i Alouatta_discolor.k141_2852575                         C 0 C 0
s Alouatta_juara.k141_1509701                                21269  9 +     25266 at---tat-gc-tg
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                            711  9 +      2906 at---tat-gc-tg
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            14824  9 -     18578 at---tat-gc-tg
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_668256                              17528  9 +     18088 at---tat-gc-tg
i Alouatta_palliata.k141_668256                          C 0 C 0
s Alouatta_puruensis.k141_1766044                            18579  9 -     18677 at---tat-gc-tg
i Alouatta_puruensis.k141_1766044                        C 0 C 0
s Alouatta_seniculus.k141_117119                             11561  9 +     50774 at---tat-gc-tg
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  12191  9 -     33861 at---tat-gc-tg
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            12212  9 -     34016 at---tat-gc-tg
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4294607  9 -   5030052 AT---TAT-GC-TG
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             12213  9 -     34685 at---tat-gc-tg
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               25334  9 -     47192 at---tat-gc-tg
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       8825  9 +     20879 at---aa--acatt
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 2
s Arctocebus_calabarensis.k141_288239                        16420  6 +     17124 -------t-gccca
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Avahi_laniger.k141_765380                                  50868 10 -     92717 at---cat-gccta
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              51497 10 +     85213 at---cat-gccta
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             1948  9 -     10423 at---tat-gc-tg
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             21435  9 +     31915 at---tat-gc-tg
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            1915  9 +      5267 at---tat-gc-tg
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23587127  9 - 189096842 at---tat-gc-tg
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              8659  9 -     12001 at---tat-gc-tg
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10000017  9 -  17673402 -t---tat-gctta
i Camelus_bactrianus.KN276810.1                          I 1 C 0
s Camelus_dromedarius.KN272107.1                           2332481  9 -   7040546 -t---tat-gctta
i Camelus_dromedarius.KN272107.1                         I 1 C 0
s Camelus_ferus.KB017975.1                                  400757  9 -   1652518 -t---tat-gctta
i Camelus_ferus.KB017975.1                               I 1 C 0
s CanFam4.chr16                                           17796913  9 -  60362399 -t---cat-gccaa
i CanFam4.chr16                                          I 1 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182970  9 -    185531 -t---cat-gccaa
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 1 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9032356  9 -   9314153 -t---cat-gccaa
i Canis_lupus_dingo.QKWQ01000480.1                       I 1 C 0
s Canis_lupus_familiaris.chr16                            17956621  9 -  59632846 -t---cat-gccaa
i Canis_lupus_familiaris.chr16                           I 1 C 0
s Canis_lupus_orion.HG994398.1                            18497921  9 +  63665305 -t---cat-gccaa
i Canis_lupus_orion.HG994398.1                           I 1 C 0
s Carlito_syrichta.NW_007259797.1                           142672 10 -    496798 at---tat-acatc
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    135287  9 +    179628 at---ta--accta
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     90326  9 +    217609 -t---tgt-gctta
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          6568  9 -     11392 at---tat-gc-tg
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               2666  9 -      7577 at---tat-gc-tg
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         6581 10 -      8605 at---tat-acatc
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12229034  9 +  27778364 -t---cat-gccta
i Ceratotherium_simum.JH767749.1                         I 1 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634             61  9 -     25243 -t---cat-gccta
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 1 C 0
s Cercocebus_atys.KQ010504.1                               4472177  9 +   4669795 AT---TAT-Gc-ta
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        10724  9 -     19203 at---tat-gc-ta
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           5146  9 +      8260 at---tat-gc-ta
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           5373  9 +     27781 at---tat-gc-ta
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         5528  9 -     20310 at---tat-gc-ta
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           8512  9 +     29689 at---tat-gc-ta
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            2940  9 +      9989 at---tat-gc-ta
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          11189  9 -     27936 at---tat-gc-ta
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                            11219  9 -     11289 at---tac-gc-ta
i Cercopithecus_lowei.k141_457449                        C 0 C 0
s Cercopithecus_albogularis.ctg5                                38813594  9 +  39242232 at---tat-gc-ta
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21219290  9 -  21565898 at---tac-gc-ta
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       36409  9 -     53127 at---tac-ac-ta
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        3695  9 +      7159 at---tat-gc-ta
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       11212  9 -     27947 at---tac-gc-ta
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         11188  9 +     17596 at---tac-gc-ta
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                           410  9 +     26000 at---tat-gc-ta
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             18288 10 -     52598 at---cat-gccta
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           13637 10 +     57038 at---cat-gccta
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           7580  9 +     11226 at---tat-gc-tg
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18425150  9 -  18827391 at---tat-gc-ta
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       11591  9 -     50209 at---tat-gc-ta
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135418597  9 + 135778131 AT---TAT-Gc-ta
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1907111  9 +   2368649 AT---TAT-Gc-ta
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199946783  9 + 200372422 at---tat-gc-ta
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              33655  9 +     84244 at---tat-gc-ta
i Colobus_polykomos.k141_906115                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_287352              1615  9 +      4208 -ttgtccc-tc---
i Crocidura_indochinensis.CroInd_scaffold_287352         I 186 n 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             26088  9 -     87169 -t---cat-gctaa
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 1 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    834369  9 +   1526836 at---ca--actta
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12534459 10 -  12879189 at---cat-gccta
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  670886  9 +   1390856 -t---cat-gccta
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 1 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    3642  9 +    198055 -t---cat-gccta
i Diceros_bicornis.DicBicMic_scaffold_5955               I 1 C 0
s Enhydra_lutris.KZ291758.1                               16326929  9 -  41312741 -c---cat-gccaa
i Enhydra_lutris.KZ291758.1                              I 1 C 0
s Equus_asinus.JREZ01000139.1                              1280935  9 +   4378816 -t---cat-gccta
i Equus_asinus.JREZ01000139.1                            I 1 C 0
s Equus_caballus.CM000403.2                               18528755  9 -  39960074 -t---cat-gccta
i Equus_caballus.CM000403.2                              I 1 C 0
s Equus_przewalskii.KK951119.1                               30770  9 +    498745 -t---cat-gccta
i Equus_przewalskii.KK951119.1                           I 1 C 0
s Erythrocebus_patas.Contig38                             21201792  9 -  21539334 at---tat-gc-ta
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              10973 10 -     14127 at---cat-gccta
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                3671 10 -     16928 at---cat-gccta
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              12704 10 -     25546 at---cat-gccta
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             9889 10 +     26330 at---cat-gccta
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 11137 10 +     23973 at---cat-gccta
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 9889 10 +     75513 at---cat-gccta
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  7840 10 +     97555 at---cat-gccta
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            10768 10 +     26496 at---cat-gccta
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  1373 10 -     17153 at---cat-gccta
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              10949 10 +    111500 at---cat-gccta
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20234790  9 + 206538554 -t---cat-gctaa
i Felis_catus.CM001381.2                                 I 1 C 0
s Felis_catus_fca126.CM031415.1                           20193634  9 + 205367284 -t---cat-gctaa
i Felis_catus_fca126.CM031415.1                          I 1 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  7146  9 -     36744 -t---cat-gctaa
i Felis_nigripes.FelNig_flattened_line_20823             I 1 C 0
s Galago_moholi.ctg2040                                     423243  5 -    453645 ---------GCACA
i Galago_moholi.ctg2040                                  N 0 C 0
s Galago_senegalensis.k141_631886                              950  5 +     11339 ---------GCACA
i Galago_senegalensis.k141_631886                        N 0 C 0
s Galagoides_demidoff.k141_1959596                            3598  6 +      6795 -------t-acaaa
i Galagoides_demidoff.k141_1959596                       C 0 I 1151
s Galeopterus_variegatus.GalVar_scaffold_266699               1437 10 +      2098 at---cat-gccta
i Galeopterus_variegatus.GalVar_scaffold_266699          C 0 C 0
s Gorilla_beringei.k141_3596273                              12521  9 -     32273 at---tat-gc-ta
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186334669  9 + 186649187 at---tat-gc-ta
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   31743  9 +     78134 at---ca--acttt
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           4030 10 -     19426 at---cat-gccta
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              9174 10 -     15286 at---cat-gccta
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             10812 10 +     18253 at---cat-gccta
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         10915 10 -     41752 at---cat-gccta
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         10748 10 -     16460 at---cat-gccta
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               239922  9 +    327341 -t---cat-gctaa
i Helogale_parvula.HelPar_flattened_line_2585            I 1 C 0
s Hoolock_leuconedys.ctg274                                    431364  9 +    630532 at---tat-gc-ta
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  42074  9 +     55795 -t---cat-gctaa
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 1 C 0
s Hylobates_agilis.k141_307679                               14298  9 -     15490 at---tat-gc-ta
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              56304  9 +     67168 at---tat-gc-ta
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189539954  9 - 191637585 at---tat-gc-ta
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3332847  9 -  11177569 at---tat-gc-ta
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7516879  9 -   7955117 at---ca--acctt
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   19722 10 +     31101 at---cac-gccta
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15521277 10 -  30322482 at---cat-gccta
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        4349  9 +     64341 at---cat-gc-tg
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           1409  9 +      4941 at---cat-gc-tg
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4277  9 +     35603 at---cat-gc-tg
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    25705  9 +     38576 at---tat-gc-tg
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         22402  9 +     66356 at---tat-gc-tg
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          8172 10 -     23766 gt---cat-gccta
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             26119 10 +     45836 at---cat-gccta
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_320948                           402 10 -      1719 at---cat-gccta
i Lepilemur_ruficaudatus.k141_320948                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      24174 10 +     54090 at---cat-gccta
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3040062  9 +   3914936 -c---cat-gccaa
i Leptonychotes_weddellii.KB714746.1                     I 1 C 0
s Lepus_americanus.LepAme_scaffold_107385                     3712 10 -     14121 ag---tta-accta
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1433722  9 +   1826925 at---tat-gc-ta
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            2645  6 +     11245 -------t-gccca
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1001482  6 +   6120653 -------t-gccca
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17952861  9 -  59628241 -t---cat-gccaa
i Lycaon_pictus.CM007581.1                               I 1 C 0
s Macaca_arctoides.k141_2326796                               3543  9 +     40492 at---tat-gc-ta
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59672797  9 +  60120075 at---tat-gc-ta
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  9299  9 -     26193 at---tat-gc-ta
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            77095  9 -    114318 at---tat-gc-ta
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  2810  9 -     23192 at---tat-gc-ta
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                12262  9 -     29190 at---tat-gc-ta
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  20830  9 +     37952 at---tat-gc-ta
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186835918  9 + 187317192 at---tat-gc-ta
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25454481  9 -  25927173 at---tat-gc-ta
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  76679  9 +     89720 at---tat-gc-ta
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 3676  9 +     20474 at---tat-gc-ta
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   3478  9 -     14993 at---tat-gc-ta
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  326348  9 -    668171 at---tat-gc-ta
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 1780  9 -     24072 at---tat-gc-ta
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               22417  9 -     45290 at---tat-gc-ta
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23933965  9 -  24302211 at---tat-gc-ta
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               348141  9 +    752769 at---tat-gc-ta
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              17082  9 +    737560 -a---cat-gccca
i Manis_javanica.JSZB01003497.1                          I 1 C 0
s Manis_pentadactyla.KN006162.1                              48467  9 -    317179 -a---cat-gccca
i Manis_pentadactyla.KN006162.1                          I 1 C 0
s Marmota_marmota.CZRN01000018.1                          33099191  9 -  40650429 at---ca--acctt
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              7637  9 +     13704 -c---cat-gccaa
i Mellivora_capensis.MelCap_flattened_line_69365         I 1 C 0
s Mico_argentatus.k141_1239457                                2494  9 -      7380 at---tat-gc-tg
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               1564  9 +     18990 at---tat-gc-tg
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      2499  9 -      7356 at---tat-gc-tg
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18288663 10 -  93316391 at---cat-gccta
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_534055                           5718  9 -     28506 at---tat-gc-ta
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         2899  9 -      8324 -c---cat-gccaa
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 1 C 0
s Mirza_zaza.k141_952172                                      6233 10 -     37649 at---cat-gccta
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138929  9 -    366855 -t---cat-gctta
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 1 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   33025  9 +     37127 -t---cat-gctaa
i Mungos_mungo.MunMun_flattened_line_23663               I 1 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              3998  9 +     14296 at---tg--acttt
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               298818  9 -  14710649 -c---cat-gccaa
i Mustela_putorius.JH418006.1                            I 1 C 0
s Nasalis_larvatus.k141_413338                               11714  9 +     21681 at---tat-gc-ta
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    757511  9 +    783361 -t---cat-gctta
i Noctilio_leporinus.NocLep_scaffold_251                 I 1 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9147122  9 -   9404916 -t---cat-gccaa
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 1 C 0
s Nycticebus_bengalensis.LG01                            102576459  6 - 196305487 -------t-gccca
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             4145  6 +      8486 -------t-gccca
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105746886  6 + 199412804 -------t-gccca
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1360022 10 +   3988456 ag---tga-aggag
i Ochotona_princeps.JH802162.1                           I 487 C 0
s Odobenus_rosmarus.KB229312.1                              504205  9 -   2017862 -c---cat-gccaa
i Odobenus_rosmarus.KB229312.1                           I 1 C 0
s Oryctolagus_cuniculus.CM000791.1                        67144556 10 + 174332312 ag---tta-acctt
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       459876  9 -    559221 -t---cat-gccaa
i Otocyon_megalotis.JAEUCK010005147.1                    I 1 C 0
s Otolemur_crassicaudatus.k141_222918                          785  5 +      8798 ---------GCACA
i Otolemur_crassicaudatus.k141_222918                    N 0 C 0
s Otolemur_garnettii.GL873799.1                             692952  5 -   1103335 ---------gcacA
i Otolemur_garnettii.GL873799.1                          N 0 C 0
s Pan_paniscus.KQ411613.1                                    40639  9 +     80009 AT---TAT-GC-ta
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189139531  9 + 189151597 AT---TAT-GC-ta
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  148798  9 +    230217 -t---cat-gctaa
i Panthera_onca.PanOnc_flattened_line_3271               I 1 C 0
s Panthera_pardus.KV860321.1                                262005  9 +  18783137 -t---cat-gctaa
i Panthera_pardus.KV860321.1                             I 1 C 0
s Panthera_tigris.KE722367.1                               4718641  9 -   8748460 -t---cat-gctaa
i Panthera_tigris.KE722367.1                             I 1 C 0
s Papio_anubis.CM001495.2                                183439751  9 + 183742232 AT---TAT-Gc-ta
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             3444  9 +     20448 at---tat-gc-ta
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20560249  9 +  20919399 at---tat-gc-ta
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   2187  9 +     41871 at---tat-gc-ta
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     5473  9 +     27711 at---tat-gc-ta
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  5552  9 +      9205 at---tat-gc-ta
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10258  9 -     78924 -t---cat-gctga
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 1 C 0
s Perodicticus_ibeanus.k141_855320                            6653  6 +     13100 -------t-gccca
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             5026  6 +     25941 -------t-gccca
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Piliocolobus_badius.k141_1234363                           40227  9 +     62158 at---tat-gc-ta
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        34949  9 +     89929 at---tat-gc-ta
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            36365  9 +     51399 at---tat-gc-ta
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14292603  9 -  14605196 AT---TAT-Gc-ta
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189127673  9 + 189387572 at---tat-gc-ta
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9567281  9 +   9816681 at---tat-gc-ta
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               69877  9 -     81375 at---tat-gc-ta
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              1697  9 +     19060 at---tat-gc-ta
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2593928 10 -   4620579 at---cat-gccta
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     987920 10 +   2598838 at---cat-gccta
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          26231 10 +     38485 at---cat-gccta
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             2390 10 +      4256 at---cat-gccta
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          23750 10 +     35766 at---cat-gccta
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           1932 10 -     24134 at---cat-gccta
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        25745 10 -     67325 at---cat-gccta
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           1983 10 -      6182 at---cat-gccta
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            12324  9 -     21811 -t---cat-gctta
i Pteronotus_parnellii.KE909381.1                        I 1 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         37836  9 +     42204 -c---cat-gccaa
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 1 C 0
s Puma_concolor.QAVW01001104.1                            20271920  9 -  38429054 -t---cat-gctaa
i Puma_concolor.QAVW01001104.1                           I 1 C 0
s Pygathrix_cinerea.k141_1153803                             11708  9 -     91421 at---tat-gc-ta
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7605836  9 +   7812017 at---tat-gc-ta
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11684  9 -     72585 at---tat-gc-ta
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             3392  9 -     11128 at---tat-gc-ta
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91232747  9 - 195417433 AT---TAT-Gc-ta
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7668396  9 +   7961872 at---tat-gc-ta
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_2619299                               4605  9 -      8359 at---tat-gc-tg
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            10914  9 -     13588 at---tat-gc-tg
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              4550  9 -      6207 at---tat-gc-tg
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               10277  9 +     13640 at---tat-gc-tg
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               5140  9 +      8564 at---tat-gc-tg
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209465418  9 + 209938924 at---tat-gc-tg
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 4630  9 -      9399 at---tat-gc-tg
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 1779  9 +      3421 at---tat-gc-tg
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119947978  9 - 121099817 at---tat-gc-cG
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       20445  9 +     46362 at---tat-gc-ca
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               20540  9 +     45824 at---tat-gc-cg
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             37155  9 -     64574 at---tat-gc-cg
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                                161  9 -     23631 at---tat-gc-cg
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 20433  9 -     61129 at---tat-gc-ca
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          16220  9 -     19888 at---tat-gc-ta
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      23422  9 +     39453 at---tat-gc-ta
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            3948  9 +     27826 at---tat-gc-ta
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             3469  9 -     19483 at---tat-gc-ta
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      3531  9 +      7198 at---tat-gc-ta
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         11791  9 +     15514 at---tat-gc-ta
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            188852  2 -    191337 ------------ta
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1949963  9 -   3870691 at---ca--acctt
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             28362  9 +     97271 -c---cat-gctaa
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 1 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              15919  9 -    196729 -t---cat-gctaa
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 C 0
s Sus_scrofa.JH118708.1                                      32833  9 -     47482 -t---taa-actta
i Sus_scrofa.JH118708.1                                  I 3 C 0
s Symphalangus_syndactylus.tarseq_199                      1089996  9 -   1523678 at---tat-gc-ta
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 8318  9 +     41958 -t---tat-tctta
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 1 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      116370  9 -    156842 -t---cat-gccaa
i Tapirus_indicus.TapInd_scaffold_9301                   I 1 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    384820  9 +    539355 -t---cat-gccaa
i Tapirus_terrestris.TapTer_scaffold_755                 I 1 C 0
s Tarsius_lariang.k141_2201908                               12310 10 +     70052 at---tat-acatc
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               16615 10 +     25099 at---tat-acatc
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186425116  9 + 186847797 at---tat-gc-ta
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          7522  9 -     20410 at---tat-gc-ta
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    11717  9 +     15221 at---tat-gc-ta
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        7623  9 +     19930 at---tat-gc-ta
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       4053  9 -     19997 at---tat-gc-ta
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            44172  9 -     60166 at---tat-gc-ta
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        11643  9 -     27529 at---tat-gc-ta
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     11585  9 -     18194 at---tat-gc-ta
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           5320  9 -     21137 at---tat-gc-ta
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    4023  9 -     10723 at---tat-gc-ta
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         3175  9 +      9834 at---tat-gc-ta
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        21490  9 +     32220 at---tat-gc-ta
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5935590  9 +   6242583 at---tat-gc-ta
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        4837  9 +     20839 at---tat-gc-ta
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2152080 10 +   4065304 at---cg-tgtctg
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     5400  2 -     10553 ------------tg
i Tupaia_tana.TupTan_flattened_line_97126                I 1 C 0
s Ursus_maritimus.KK499267.1                               4848081  9 -   5085361 -c---cat-gccaa
i Ursus_maritimus.KK499267.1                             I 1 C 0
s Varecia_rubra.k141_590885                                   8611 10 +     50397 at---cat-gccta
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              8666 10 +     24756 at---cat-gccta
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5369517  9 -   5488506 -t---aat-gctta
i Vicugna_pacos.KN270157.1                               I 1 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  8533  9 -     43706 -t---cat-gccaa
i Vulpes_lagopus.VulLag_flattened_line_30954             I 1 C 0
s Xerus_inauris.XerIna_scaffold_48378                        21342  9 -     24430 at---ca--acctt
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          2772  9 +     86975 -c---cat-gccaa
i Zalophus_californianus.ZalCal_flattened_line_17732     I 1 C 0
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519  0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188  0 +      1777 C
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Mus_pahari.LT608297.1                                   31351706  0 -  89631738 C
e Mus_spretus.CM004101.1                                  90749500  0 - 130317789 C
e Mus_musculus.chr8                                       87647421  0 - 129401213 C
e Mus_caroli.LT608237.1                                   84358433  0 - 120012414 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      11935  1 +     63895 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383  9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   2809  0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 70244  0 +    116680 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    10676  0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                85637 14 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rattus_norvegicus.chr16                                 53567515  0 +  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Pteropus_vampyrus.KN525825.1                             1357734 14 +   4952924 I
e Pteropus_alecto.KB030862.1                              22974644 14 +  28871421 I
e Psammomys_obesus.NESX01036370.1                             6982  0 -     21651 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18191253  0 -  18517816 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    76654  0 +    102263 C
e Ondatra_zibethicus.OndZib_scaffold_46174                   21202  0 +     28053 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186890  0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11257107  0 -  27267610 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12179856  0 -  29670104 C
e Meriones_unguiculatus.MerUng_scaffold_7390                 29331  0 +    140813 C
e Megaderma_lyra.MegLyr_scaffold_4542                         8178  0 -    207569 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 88455  4 +     94391 I
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8272963  1 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_29171               41045  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       109621  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Ellobius_talpinus.LOJH01109367.1                            3007  0 -      6299 C
e Ellobius_lutescens.LOEQ01008920.1                          16953  0 -    110024 C
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Eidolon_helvum.KE759718.1                                   8374  9 +     11740 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            61949  0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Cricetulus_griseus.LT883664.1                           11664758  8 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 47433  0 +     63868 C
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          11837  0 -     20389 C
e Condylura_cristata.JH655891.1                           17547132  5 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            171068  0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15969  0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            5641  0 -      6351 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     66596  1 -     89534 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     67723  0 +     87051 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       3296  8 +     62944 tg-t-------aatga
s Acinonyx_jubatus.LLWD01001279.1                           824933  8 -   1699592 ca-c-------aatga
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9508176 15 -  29979442 ca-cctctataagtga
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             76959  8 -    347723 ca-t-------gatga
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   11226  8 -     52922 tg-t-------aatga
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         11160  8 -     28001 tg-t-------aatga
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          1606  8 -     18505 tg-t-------aatga
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           2455  8 -     12518 tg-t-------aatga
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_2038611                             23583  8 +     24414 tg-t-------aatga
i Alouatta_belzebul.k141_2038611                         C 0 I 1
s Alouatta_caraya.k141_885645                                54344  8 +     54689 tg-t-------aatga
i Alouatta_caraya.k141_885645                            C 0 I 1
s Alouatta_discolor.k141_2852575                            124933  8 +    125349 tg-t-------aatga
i Alouatta_discolor.k141_2852575                         C 0 I 1
s Alouatta_juara.k141_1509701                                21278  8 +     25266 tg-t-------aatga
i Alouatta_juara.k141_1509701                            C 0 I 1
s Alouatta_macconnelli.k141_1406484                            720  8 +      2906 tg-t-------aatga
i Alouatta_macconnelli.k141_1406484                      C 0 I 1
s Alouatta_nigerrima.k141_3472759                            14833  8 -     18578 tg-t-------aatga
i Alouatta_nigerrima.k141_3472759                        C 0 I 1
s Alouatta_palliata.k141_668256                              17537  8 +     18088 tg-t-------aatga
i Alouatta_palliata.k141_668256                          C 0 I 1
s Alouatta_puruensis.k141_1766044                            18588  8 -     18677 tg-t-------aatga
i Alouatta_puruensis.k141_1766044                        C 0 I 1
s Alouatta_seniculus.k141_117119                             11570  8 +     50774 tg-t-------aatga
i Alouatta_seniculus.k141_117119                         C 0 I 1
s Aotus_azarae.k141_3104676                                  12200  8 -     33861 tg-t-------aatga
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            12221  8 -     34016 tg-t-------aatga
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4294616  8 -   5030052 TG-T-------AATGA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             12222  8 -     34685 tg-t-------aatga
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               25343  8 -     47192 tg-t-------aatga
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       8836  2 +     20879 --------------ga
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 2 C 0
s Arctocebus_calabarensis.k141_288239                        16426  8 +     17124 tg-t-------aatga
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Avahi_laniger.k141_765380                                  50878  8 -     92717 ca-t-------aatga
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              51507  8 +     85213 ca-t-------aatga
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             1957  8 -     10423 tg-t-------aatga
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             21444  8 +     31915 tg-t-------aatga
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            1924  8 +      5267 tg-t-------aatga
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23587136  8 - 189096842 tg-t-------aatga
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              8668  8 -     12001 tg-t-------aatga
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10000026  8 -  17673402 ca-a-------agtca
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2332490  8 -   7040546 ca-a-------agtca
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  400766  8 -   1652518 ca-a-------agtca
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17796922  8 -  60362399 ta-c-------tatga
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182979  8 -    185531 ta-c-------tatga
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9032365  8 -   9314153 ta-c-------tatga
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17956630  8 -  59632846 ta-c-------tatga
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18497930  8 +  63665305 ta-c-------tatga
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           142682  8 -    496798 tt-c-------aatga
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    135296  8 +    179628 ca-t-------aatga
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 23
s Catagonus_wagneri.CatWag_scaffold_2839                     90335  8 +    217609 ca-a-------actta
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          6577  8 -     11392 tg-t-------aatga
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               2675  8 -      7577 tg-t-------aatga
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         6591  8 -      8605 tt-c-------aatgg
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12229043  8 +  27778364 ca-a-------aatga
i Ceratotherium_simum.JH767749.1                         C 0 I 24
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634             70  8 -     25243 ca-a-------aatga
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 I 24
s Cercocebus_atys.KQ010504.1                               4472186  8 +   4669795 tg-t-------aatga
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        10733  8 -     19203 tg-t-------aatga
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           5155  8 +      8260 tg-t-------aatga
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           5382  8 +     27781 tg-t-------aatga
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         5537  8 -     20310 tg-t-------aatga
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           8521  8 +     29689 tg-t-------aatga
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            2949  8 +      9989 tg-t-------aatga
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          11198  8 -     27936 tg-t-------aatga
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_457449                            11228  8 -     11289 tg-t-------aatga
i Cercopithecus_lowei.k141_457449                        C 0 N 0
s Cercopithecus_albogularis.ctg5                                38813603  8 +  39242232 tg-t-------aatga
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21219299  8 -  21565898 tg-t-------aatga
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       36418  8 -     53127 tg-t-------aatga
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        3704  8 +      7159 tg-t-------aatga
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       11221  8 -     27947 tg-t-------aatga
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         11197  8 +     17596 tg-t-------aatga
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                           419  8 +     26000 tg-t-------aatga
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             18298  8 -     52598 ca-t-------aatga
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           13647  8 +     57038 ta-t-------aatga
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           7589  8 +     11226 tg-t-------agtga
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18425159  8 -  18827391 tg-t-------aatga
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       11600  8 -     50209 tg-t-------aatga
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135418606  8 + 135778131 tg-t-------aatga
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1907120  8 +   2368649 tg-t-------aatga
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199946792  8 + 200372422 tg-t-------aatga
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              33664  8 +     84244 tg-t-------aatga
i Colobus_polykomos.k141_906115                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             26097  8 -     87169 ca-c-------catga
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    834378  8 +   1526836 tg-t-------aatga
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12534469  8 -  12879189 ca-t-------gagga
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  670895  8 +   1390856 ca-a-------aatga
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 24
s Diceros_bicornis.DicBicMic_scaffold_5955                    3651  8 +    198055 ca-a-------aatga
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 24
s Enhydra_lutris.KZ291758.1                               16326938  8 -  41312741 ca-c-------aatga
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1280944  8 +   4378816 ca-a-------aatga
i Equus_asinus.JREZ01000139.1                            C 0 I 24
s Equus_caballus.CM000403.2                               18528764  8 -  39960074 ca-a-------aatga
i Equus_caballus.CM000403.2                              C 0 I 24
s Equus_przewalskii.KK951119.1                               30779  8 +    498745 ca-a-------aatga
i Equus_przewalskii.KK951119.1                           C 0 I 24
s Erythrocebus_patas.Contig38                             21201801  8 -  21539334 tg-g-------aatga
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              10983  8 -     14127 ca-t-------aatga
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                3681  8 -     16928 ca-t-------aatga
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              12714  8 -     25546 ca-t-------aatga
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             9899  8 +     26330 ca-t-------aatga
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 11147  8 +     23973 ca-t-------aatga
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 9899  8 +     75513 ca-t-------aatga
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  7850  8 +     97555 ca-t-------aatga
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            10778  8 +     26496 ca-t-------aatga
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  1383  8 -     17153 ca-t-------aatga
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              10959  8 +    111500 ca-t-------aatga
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20234799  8 + 206538554 ca-c-------aatga
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20193643  8 + 205367284 ca-c-------aatga
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  7155  8 -     36744 ca-c-------aatga
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     423248  8 -    453645 TG-T-------AATGA
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                              955  8 +     11339 TG-T-------AATGA
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1959596                            4755  8 +      6795 gg-t-------aatga
i Galagoides_demidoff.k141_1959596                       I 1151 C 0
s Galeopterus_variegatus.GalVar_scaffold_266699               1447  8 +      2098 tg-t-------aatga
i Galeopterus_variegatus.GalVar_scaffold_266699          C 0 I 83
s Gorilla_beringei.k141_3596273                              12530  8 -     32273 tg-t-------aatga
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186334678  8 + 186649187 tg-t-------aatga
i Gorilla_gorilla.LT578341.1                             C 0 I 84
s Graphiurus_murinus.GraMur_scaffold_10447                   31752  8 +     78134 ct-t-------aatga
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 21
s Hapalemur_alaotrensis.k141_170648                           4040  8 -     19426 ca-t-------aatga
i Hapalemur_alaotrensis.k141_170648                      C 0 I 83
s Hapalemur_gilberti.k141_488810                              9184  8 -     15286 ca-t-------aatga
i Hapalemur_gilberti.k141_488810                         C 0 I 83
s Hapalemur_griseus.k141_1511508                             10822  8 +     18253 ca-t-------aatga
i Hapalemur_griseus.k141_1511508                         C 0 I 83
s Hapalemur_meridionalis.k141_248335                         10925  8 -     41752 ca-t-------aatga
i Hapalemur_meridionalis.k141_248335                     C 0 I 83
s Hapalemur_occidentalis.k141_907772                         10758  8 -     16460 ca-t-------aatga
i Hapalemur_occidentalis.k141_907772                     C 0 I 83
s Helogale_parvula.HelPar_flattened_line_2585               239931  8 +    327341 ca-c-------catga
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hoolock_leuconedys.ctg274                                    431373  8 +    630532 tg-t-------aatga
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  42083  8 +     55795 ca-c-------aatga
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_307679                               14307  8 -     15490 tg-t-------aatga
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              56313  8 +     67168 tg-t-------aatga
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189539963  8 - 191637585 tg-t-------aatga
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3332856  8 -  11177569 tg-t-------aatga
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7516888  8 -   7955117 ca-t-------agtga
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   19732  8 +     31101 ca-t-------aatga
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15521287  8 -  30322482 ca-t-------aagga
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        4358  8 +     64341 cg-t-------aatga
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           1418  8 +      4941 cg-t-------aatga
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4286  8 +     35603 cg-t-------aatga
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    25714  8 +     38576 tg-t-------aatga
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         22411  8 +     66356 tg-t-------aatga
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          8182  8 -     23766 ca-t-------aatga
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             26129  8 +     45836 ca-t-------aatga
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_320948                           412  8 -      1719 ca-t-------aatga
i Lepilemur_ruficaudatus.k141_320948                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      24184  8 +     54090 ca-t-------aatga
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3040071  8 +   3914936 ca-c-------aatga
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     3722  8 -     14121 ta-c-------atgga
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 44
s Lophocebus_aterrimus.ctg367                              1433731  8 +   1826925 tg-t-------aatga
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            2651  8 +     11245 tg-t-------aatga
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1001488  8 +   6120653 tg-t-------aatga
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17952870  8 -  59628241 ta-c-------tatga
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               3552  8 +     40492 tg-t-------aatga
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59672806  8 +  60120075 tg-t-------aatga
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  9308  8 -     26193 tg-t-------aatga
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            77104  8 -    114318 tg-t-------aatga
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  2819  8 -     23192 tg-t-------aatga
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                12271  8 -     29190 tg-t-------aatga
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  20839  8 +     37952 tg-t-------aatga
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186835927  8 + 187317192 tg-t-------aatga
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25454490  8 -  25927173 tg-t-------aatga
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  76688  8 +     89720 tg-t-------aatga
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 3685  8 +     20474 tg-t-------aatga
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   3487  8 -     14993 tg-t-------aatga
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  326357  8 -    668171 tg-t-------aatga
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 1789  8 -     24072 tg-t-------aatga
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               22426  8 -     45290 tg-t-------aatga
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23933974  8 -  24302211 tg-t-------aatga
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               348150  8 +    752769 tg-t-------aatga
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              17091  8 +    737560 ca-t-------aatga
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              48476  8 -    317179 ca-t-------aatga
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33099200  8 -  40650429 ca-t-------agtga
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              7646  8 +     13704 ca-c-------aatga
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mico_argentatus.k141_1239457                                2503  8 -      7380 tg-t-------aatga
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               1573  8 +     18990 tg-t-------aatga
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      2508  8 -      7356 tg-t-------aatga
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18288673  8 -  93316391 ca-t-------aatga
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_534055                           5727  8 -     28506 tg-t-------aatga
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         2908  8 -      8324 ca-c-------aatga
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      6243  8 -     37649 ca-t-------aatga
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138938  8 -    366855 ca-a-------aatac
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   33034  8 +     37127 ca-c-------catga
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              4007  9 +     14296 cttt-------aataa
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 17
s Mustela_putorius.JH418006.1                               298827  8 -  14710649 ca-c-------aatga
i Mustela_putorius.JH418006.1                            C 0 C 0
s Nasalis_larvatus.k141_413338                               11723  8 +     21681 tg-t-------aatga
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    757520  8 +    783361 ca-a-------aatca
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9147131  8 -   9404916 ta-c-------tatga
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102576465  8 - 196305487 ta-t-------aatga
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             4151  8 +      8486 ta-t-------aatga
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105746892  8 + 199412804 tg-t-------aatga
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1360032  8 +   3988456 ca-a-------ataaa
i Ochotona_princeps.JH802162.1                           C 0 I 417
s Odobenus_rosmarus.KB229312.1                              504214  8 -   2017862 ca-c-------aatga
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67144566  8 + 174332312 ta-c-------atgga
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 44
s Otocyon_megalotis.JAEUCK010005147.1                       459885  8 -    559221 ta-c-------tataa
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                          790  8 +      8798 TG-T-------AATGA
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             692957  8 -   1103335 TG-T-------AATGA
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    40648  8 +     80009 tg-t-------aatga
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189139540  8 + 189151597 tg-t-------aatga
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  148807  8 +    230217 cg-c-------aatga
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                262014  8 +  18783137 cg-c-------aatga
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4718650  8 -   8748460 cg-c-------aatga
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183439760  8 + 183742232 tg-t-------aatga
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             3453  8 +     20448 tg-t-------aatga
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20560258  8 +  20919399 tg-t-------aatga
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   2196  8 +     41871 tg-t-------aatga
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     5482  8 +     27711 tg-t-------aatga
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  5561  8 +      9205 tg-t-------aatga
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10267  8 -     78924 ca-c-------aatga
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            6659  8 +     13100 tg-t-------aatga
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             5032  8 +     25941 tg-t-------aataa
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Piliocolobus_badius.k141_1234363                           40236  8 +     62158 tg-t-------aatga
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        34958  8 +     89929 tg-t-------aatga
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            36374  8 +     51399 tg-t-------aatga
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14292612  8 -  14605196 tg-t-------aatga
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189127682  8 + 189387572 tg-t-------aatga
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9567290  8 +   9816681 tg-t-------aatga
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               69886  8 -     81375 tg-t-------aatga
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              1706  8 +     19060 tg-t-------aatga
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2593938  8 -   4620579 ca-t-------aatgc
i Prolemur_simus.MPIZ01000396.1                          C 0 I 83
s Propithecus_coquerelli.NW_012148875.1                     987930  8 +   2598838 ca-t-------aatga
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          26241  8 +     38485 ca-t-------aatga
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             2400  8 +      4256 ca-t-------aatga
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          23760  8 +     35766 ca-t-------aatga
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           1942  8 -     24134 ca-t-------aatga
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        25755  8 -     67325 ca-t-------aatga
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           1993  8 -      6182 ca-t-------aatga
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            12333  8 -     21811 ca-a-------aatac
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         37845  8 +     42204 ca-c-------aatga
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Puma_concolor.QAVW01001104.1                            20271929  8 -  38429054 ca-c-------aatga
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             11717  8 -     91421 tg-t-------aatga
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7605845  8 +   7812017 tg-t-------aatga
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11693  8 -     72585 tg-t-------aatga
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             3401  8 -     11128 tg-t-------aatga
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91232756  8 - 195417433 tg-t-------aatga
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7668405  8 +   7961872 tg-t-------aatga
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_2619299                               4614  8 -      8359 tg-t-------agtga
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            10923  8 -     13588 tg-t-------agtga
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              4559  8 -      6207 tg-t-------agtga
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               10286  8 +     13640 tg-t-------agtga
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               5149  8 +      8564 tg-t-------agtga
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209465427  8 + 209938924 tg-t-------agtga
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 4639  8 -      9399 tg-t-------agtga
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 1788  8 +      3421 tg-t-------agtga
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119947987  8 - 121099817 TA-T-------AATGA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       20454  8 +     46362 ta-t-------aatga
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               20549  8 +     45824 ta-t-------aatga
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             37164  8 -     64574 ta-t-------aatga
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                                170  8 -     23631 ta-t-------aatga
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 20442  8 -     61129 ta-t-------aatga
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          16229  8 -     19888 tg-t-------aatga
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      23431  8 +     39453 tg-t-------aatga
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            3957  8 +     27826 tg-t-------aatga
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             3478  8 -     19483 tg-t-------aatga
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      3540  8 +      7198 tg-t-------aatga
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         11800  8 +     15514 tg-t-------aatga
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            188854  8 -    191337 ct-t-------aatga
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1949972  8 -   3870691 ca-t-------agtga
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             28371  8 +     97271 ca-c-------aatga
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              15928  8 -    196729 ca-c-------aatga
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.JH118708.1                                      32842  8 -     47482 ca-a-------actta
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1090005  8 -   1523678 tg-t-------aatga
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 8327  8 +     41958 ca-a-------aataa
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      116379  8 -    156842 ca-a-------aatgc
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 24
s Tapirus_terrestris.TapTer_scaffold_755                    384829  8 +    539355 ca-a-------aatgc
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 24
s Tarsius_lariang.k141_2201908                               12320  8 +     70052 tt-c-------aatgg
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               16625  8 +     25099 tt-c-------aatgg
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186425125  8 + 186847797 tg-t-------aatga
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          7531  8 -     20410 tg-t-------aatga
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    11726  8 +     15221 tg-t-------aatga
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        7632  8 +     19930 tg-t-------aatga
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       4062  8 -     19997 tg-t-------aatga
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            44181  8 -     60166 tg-t-------aatga
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        11652  8 -     27529 tg-t-------aatga
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     11594  8 -     18194 tg-t-------aatga
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           5329  8 -     21137 tg-t-------aatga
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    4032  8 -     10723 tg-t-------aatga
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         3184  8 +      9834 tg-t-------aatga
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        21499  8 +     32220 tg-t-------aatga
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5935599  8 +   6242583 tg-t-------aatga
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        4846  8 +     20839 tg-t-------aatga
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2152090  8 +   4065304 tg-c-------aatga
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     5402  8 -     10553 tg-c-------aatga
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4848090  8 -   5085361 ca-c-------gatga
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   8621  8 +     50397 ca-t-------aatga
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              8676  8 +     24756 ca-t-------aatga
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5369526  8 -   5488506 ca-a-------agtca
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  8542  8 -     43706 ta-c-------tatga
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        21351  8 -     24430 ca-t-------aatga
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          2781  8 +     86975 ca-c-------aatga
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519  0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188  0 +      1777 C
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Mus_pahari.LT608297.1                                   31351706  0 -  89631738 C
e Mus_spretus.CM004101.1                                  90749500  0 - 130317789 C
e Mus_musculus.chr8                                       87647421  0 - 129401213 C
e Mus_caroli.LT608237.1                                   84358433  0 - 120012414 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      11935  1 +     63895 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383  9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   2809  0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 70244  0 +    116680 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    10676  0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                85637 14 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rattus_norvegicus.chr16                                 53567515  0 +  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Pteropus_vampyrus.KN525825.1                             1357734 14 +   4952924 I
e Pteropus_alecto.KB030862.1                              22974644 14 +  28871421 I
e Psammomys_obesus.NESX01036370.1                             6982  0 -     21651 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18191253  0 -  18517816 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    76654  0 +    102263 C
e Ondatra_zibethicus.OndZib_scaffold_46174                   21202  0 +     28053 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186890  0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11257107  0 -  27267610 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12179856  0 -  29670104 C
e Meriones_unguiculatus.MerUng_scaffold_7390                 29331  0 +    140813 C
e Megaderma_lyra.MegLyr_scaffold_4542                         8178  0 -    207569 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 88455  4 +     94391 I
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8272963  1 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_29171               41045  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       109621  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Ellobius_talpinus.LOJH01109367.1                            3007  0 -      6299 C
e Ellobius_lutescens.LOEQ01008920.1                          16953  0 -    110024 C
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Eidolon_helvum.KE759718.1                                   8374  9 +     11740 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            61949  0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Crocidura_indochinensis.CroInd_scaffold_287352              1624  0 +      4208 I
e Cricetulus_griseus.LT883664.1                           11664758  8 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 47433  0 +     63868 C
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          11837  0 -     20389 C
e Condylura_cristata.JH655891.1                           17547132  5 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            171068  0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15969  0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            5641  0 -      6351 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     66596  1 -     89534 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     67723  0 +     87051 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       3304  84 +     62944 aacctcca--------tt-aa-aa---c---ccata-a----a-ca---atggggtttggagaag------ctccaggc-tgaggagcccatca--ggatg-------cta----------g---a-ag---gg-c----------------------------ggc------acat
s Acinonyx_jubatus.LLWD01001279.1                           824941 102 -   1699592 accctcta--------ta-aa-ta---c---tccta-cac--aaa------aggtctcagagaact--tg-tg---ggt-tgttgaatacatca--agagg-------cagg---------g---a-gggt-gg-ta---a-g----c-c-c-ag-agagggcatag------aag-
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 4
s Ailuropoda_melanoleuca.LNAT01000098.1                    9508191 102 -  29979442 accctcta--------ta-aa-ta---c---cccta-aac--aaa------aggaatcagagaacttc---tg---ggt-tagtgaatacatca--cggtg-------ctgg---------g---a-gggt-gg-tatg--------c-c-c-ag-agaggacatgg------aag-
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 4
s Ailurus_fulgens.LNAC01001112.1                             76967 101 -    347723 accctcta--------ta-aa-tg---c---cccta-aac--aaa------agcggtcaaa-aact---tttg---gat-tggtgaatacatta--aggtg-------ctg---a------a---a-gggt-ag-tatg-acgag---a-----g-ag-gg-catgg------aag-
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 4
s Allenopithecus_nigroviridis.k141_3361533                   11234  84 -     52922 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---atggggttcggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         11168  84 -     28001 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---gtggggttcggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          1614  84 -     18505 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---gtggggttcggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           2463  84 -     12518 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---gtggggttcggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_2038611                             23592  72 +     24414 --------------------a-cc---t---ccata-a----a-tg---atggggtcttgagaac------ctctcgga-tgaggaacccatgg--aggtg-------tta----------g---g-ag---gg-c----------------------------agc------a-ac
i Alouatta_belzebul.k141_2038611                         I 1 C 0
s Alouatta_caraya.k141_885645                                54353  75 +     54689 --------------------a-cc---t---ccata-g----a-cctccatggggtcttgagaac------ctctcgga-tgaggaacccatgg--aggtg-------tta----------g---g-ag---gg-c----------------------------agc------a-ac
i Alouatta_caraya.k141_885645                            I 1 C 0
s Alouatta_discolor.k141_2852575                            124942  72 +    125349 --------------------a-cc---t---ccata-a----a-tg---atggggtcttgagaac------ctctcgga-tgaggaacccttgg--aggtg-------tta----------g---g-ag---gg-c----------------------------agc------a-ac
i Alouatta_discolor.k141_2852575                         I 1 C 0
s Alouatta_juara.k141_1509701                                21287  72 +     25266 --------------------a-cc---t---ccata-a----a-cg---atggggtcttgaaaac------ctctcgga-tgaggaacccatgg--aggtg-------tta----------g---g-ag---gg-c----------------------------agc------a-ac
i Alouatta_juara.k141_1509701                            I 1 C 0
s Alouatta_macconnelli.k141_1406484                            729  72 +      2906 --------------------a-cc---t---ccata-a----a-cg---atggggtcttgaaaac------ctctcgga-tgaggaacccatgg--aggtg-------tta----------g---g-ag---gg-c----------------------------agc------a-ac
i Alouatta_macconnelli.k141_1406484                      I 1 C 0
s Alouatta_nigerrima.k141_3472759                            14842  72 -     18578 --------------------a-cc---t---ccata-a----a-cg---atggggtcttgaaaac------ctctcgga-tgaggaacccatgg--aggtg-------tta----------g---g-ag---gg-c----------------------------agc------a-ac
i Alouatta_nigerrima.k141_3472759                        I 1 C 0
s Alouatta_palliata.k141_668256                              17546  72 +     18088 --------------------a-cc---t---ccata-a----a-cg---gtggggtcttgagaac------ctctcgga-tgaggaacccatgg--aggtg-------tta----------g---g-ag---gg-c----------------------------agc------a-ac
i Alouatta_palliata.k141_668256                          I 1 C 0
s Alouatta_puruensis.k141_1766044                            18597  70 -     18677 --------------------a-cc---t---ccata-a----a-cg---atggggtcttgaaaac------ctctcgga-tgaggaacccatgg--aggtg-------tta----------g---g-ag---gg-c----------------------------agc------a---
i Alouatta_puruensis.k141_1766044                        I 1 N 0
s Alouatta_seniculus.k141_117119                             11579  72 +     50774 --------------------a-cc---t---ccata-a----a-cg---atggggtcttgaaaac------ctctcgga-tgaggaacccatgg--aggtg-------tta----------g---g-ag---gg-c----------------------------agc------a-ac
i Alouatta_seniculus.k141_117119                         I 1 C 0
s Aotus_azarae.k141_3104676                                  12208  75 -     33861 a----------------t-aa-aa---c---tcata-a----a-cg---atggggtcttgagaac------ctctcaga-tgaggaacccatca--aggtg-------cta----------g---g-ag---gg-c----------------------------agc------a-ag
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            12229  75 -     34016 a----------------t-aa-aa---c---ccata-a----a-cg---atggggtcttgagaac------ctctcaga-tgaggaacccatca--aggtg-------cta----------g---g-ag---gg-c----------------------------agc------a-ag
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4294624  75 -   5030052 A----------------T-AA-AA---C---CCATA-A----A-CG---ATGGGGTCTTGAGAAC------CTCTCAGA-TGACGAACCCATCA--AGGTG-------CTA----------G---G-AG---GG-C----------------------------AGC------A-AG
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             12230  75 -     34685 a----------------t-aa-aa---c---tcata-a----a-cg---atggggtcttgagaac------ctctcaga-tgaggaacccatca--aggtg-------cta----------g---g-ag---gg-c----------------------------agc------a-ag
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               25351  75 -     47192 a----------------t-aa-aa---c---tcata-a----a-tg---atggggtcttgagaac------ctctcaga-tgaggaacccatca--aggtg-------cta----------g---g-ag---gg-c----------------------------agc------a-ag
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       8838  90 +     20879 aatatcca--------tt-aa-aa---c---tcttt-a----a-aa---tgcaggcttggagagc------ttccagttttcatgagtacattg--aagaa-------tag----------g---a-aa---gg-t----------------------------ggaataggaata-
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        16434  18 +     17124 aacctctt--------ct-aa-aa---c---cca-----------------------------------------------------------------------------------------------------------------------------------------------
i Arctocebus_calabarensis.k141_288239                    C 0 I 10
s Avahi_laniger.k141_765380                                  50886  83 -     92717 aatttcca--------tt-ga-aa---c---cccta-a----a-ca---atggggttcagagtgc------ttccaggt-tggagagcacatca--cagtt-------cag----------c---a-ag---gg-t----------------------------ggc------aca-
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              51515  83 +     85213 aacctcca--------tt-ga-aa---c---cccta-a----a-ca---atggggttcagagtgc------ttccaggt-tggagagcacatca--cggtg-------cag----------c---a-ag---gg-t----------------------------ggc------aca-
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             1965  83 -     10423 a-------acctccat-t-aa-aa---c---ccata-a----a-cg---atggggccttgagaac------ctgtcgga-tgaggaagccctca--aggtg-------cta----------g---g-cg---gg-c----------------------------agg------a-ac
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             21452  83 +     31915 a-------acctccat-t-aa-aa---c---ccata-a----a-cg---atggggccttgagaac------ctctcgga-tgaggaacccctca--aggtg-------cta----------g---g-cg---gg-c----------------------------agg------a-ac
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            1932  83 +      5267 a-------acctccat-t-aa-aa---t---ccata-a----a-cg---atggggccttgagaac------ctgtcgga-tgaggaagccctca--aggtg-------cta----------g---g-ca---gg-c----------------------------agg------a-ac
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23587144  83 - 189096842 a-------acctccat-t-aa-aa---c---ccata-a----a-CG---ATGGGGCCTTGAGAAC------CTGTCGGA-TGAGGAAGCCCTCA--AGGTG-------CTA----------G---G-CA---GG-C----------------------------AGG------A-AC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              8676  83 -     12001 a-------acctccat-t-aa-aa---c---ccata-a----a-cg---atggggccttgagaac------ctgtcgga-tgaggaagccctca--aggtg-------cta----------g---g-ca---gg-c----------------------------agg------a-ac
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10000034 111 -  17673402 aacttcca--------tt-aa-aa---g---cctta-agc--aac------agggttcagagaac------tg---tgt-tgatgaacacctct--aggtg-------ctgg---------g---c-gagt-gg-catggaagagggcacacctggagagggcatgg------gag-
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2332498 111 -   7040546 aacttcca--------tt-aa-aa---g---cctta-agc--aac------agggttcagagaac------tg---tgt-tgatgaacacctcg--aggtg-------ctgg---------g---a-gagt-gg-catggaagagggcacacctggagagggcatgg------gag-
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  400774 111 -   1652518 aacttcca--------tt-aa-aa---g---cctta-agc--aac------agggttcagagaac------tg---tgt-tgatgaacacctcg--aggtg-------ctgg---------g---c-aagt-gg-catggaagagggcacacctggagagggcatgg------gag-
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17796930 102 -  60362399 gccctcta--------ta-aa-ta---c---cccta-aac--aaa------aggacttagagaacttc---tg---ggt-tggtgaatacatca--agatt-------ctgg---------g---a-ggat-gc-tatg--------c-c-c-ag-aaagggcatgg------aag-
i CanFam4.chr16                                          C 0 I 4
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    182987 102 -    185531 gccctcta--------ta-aa-ta---c---cccta-aac--aaa------aggacttagagaacttc---tg---ggt-tggtgaatacatca--agatt-------ctgg---------g---a-ggat-gc-tatg--------c-c-c-ag-aaagggcatgg------aag-
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 I 4
s Canis_lupus_dingo.QKWQ01000480.1                         9032373 102 -   9314153 gccctcta--------ta-aa-ta---c---cccta-aac--aaa------aggacttagagaacttc---tg---ggt-tggtgaatacatca--agatt-------ctgg---------g---a-ggat-gc-tatg--------c-c-c-ag-aaagggcatgg------aag-
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 4
s Canis_lupus_familiaris.chr16                            17956638 102 -  59632846 gccctcta--------ta-aa-ta---c---cccta-aac--aaa------aggacttagagaacttc---tg---ggt-tggtgaatacatca--agatt-------ctgg---------g---a-ggat-gc-tatg--------c-c-c-ag-aaagggcatgg------aag-
i Canis_lupus_familiaris.chr16                           C 0 I 4
s Canis_lupus_orion.HG994398.1                            18497938 102 +  63665305 gccctcta--------ta-aa-ta---c---cccta-aac--aaa------aggacttagagaacttc---tg---ggt-tggtgaatacatca--agatt-------ctgg---------g---a-ggat-gc-tatg--------c-c-c-ag-aaagggcatgg------aag-
i Canis_lupus_orion.HG994398.1                           C 0 I 4
s Carlito_syrichta.NW_007259797.1                           142690  84 -    496798 tacctcca--------tt-aa-aa---c---tctta-a----a-ta---atggggtttggtgtat------ttccaggt-tggtgagcacatca--aggtg-------cta----------g---a-at---gg-t----------------------------ggc------acac
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    135327  60 +    179628 ---------------------------------------------a---atggggtttggagagc------ttccaggt-tattgagcacat--caaaggg-------cag----------g---a-aa---ga-t----------------------------agc------ata-
i Castor_canadensis.CasCan_scaffold_2074                 I 23 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     90343  97 +    217609 aacctcca--------tt-aa-aa---a---ggtta-agc--aac------agggtttagagaag------tg---ggt-tgaagaaaacactg--aggtg-------cagg---------a---g-aagt-gg-aatggcagag--------tgg------catcg------aag-
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 3
s Cebuella_niveiventris.k141_1251222                          6585  83 -     11392 a-------acctccat-t-aa-aa---c---ccata-a----a-ca---atggggccttgagaac------ctctcaga-tgaggaagccctca--aggtg-------cta----------g---g-cg---gg-c----------------------------agg------a-ac
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               2683  83 -      7577 a-------acctccat-t-aa-aa---c---ccata-a----a-tg---atggggccttgagaac------ctctcaga-tgaggaagccctca--aggcg-------cta----------g---g-cg---gg-c----------------------------agg------a-ac
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         6599  84 -      8605 tacctcca--------tt-aa-aa---c---tctta-a----a-ca---atggggtttggtgtat------ttccaggt-tggtgagcacatca--aagtg-------cta----------g---a-at---gg-t----------------------------ggc------acgc
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12229075  74 +  27778364 --------------------------------------------c------aggtttcagaaaac------tg---ggt-tggtgaacacatcg--aggtg-------ctgg---------g---a-cagt-gg-cgtg--------c-c---tggggagagcatgg------aag-
i Ceratotherium_simum.JH767749.1                         I 24 I 3
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634            102  74 -     25243 --------------------------------------------c------aggtttcagaaaac------tg---ggt-tggtgaacacatcg--aggtg-------ctgg---------g---a-cagt-gg-cgtg--------c-c---tggggagagcatgg------aag-
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 24 I 3
s Cercocebus_atys.KQ010504.1                               4472194  84 +   4669795 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---gtggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        10741  84 -     19203 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---gtggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           5163  84 +      8260 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---gtggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------agc------acat
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           5390  84 +     27781 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---gtggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         5545  84 -     20310 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---gtggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           8529  84 +     29689 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---gtggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            2957  84 +      9989 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---acggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          11206  84 -     27936 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---acggggtttggagaag------ctccaggt-tgaggagcccatca--gggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                              88  84 -     17152 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---gtggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-t----------------------------ggc------acat
i Cercopithecus_lowei.k141_1854285                       N 0 C 0
s Cercopithecus_albogularis.ctg5                                38813611  84 +  39242232 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---gtggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21219307  84 -  21565898 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---gtggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       36426  84 -     53127 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---gtggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        3712  84 +      7159 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---gtggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       11229  84 -     27947 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---gtggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         11205  81 +     17596 aa---cca--------tc-aa-aa---c---ccaca-a----a-ca---gtggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                           427  84 +     26000 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---acggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             18306  83 -     52598 aacctcca--------tt-aa-aa---c---cccta-a----a-ca---atggggtttggagtgc------ttccagat-tggcgagcacatca--gggtg-------ctg----------c---a-ag---gg-t----------------------------ggc------acg-
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           13655  83 +     57038 aacctcca--------tt-aa-aa---c---cccta-a----a-ca---atggggtttggagtgc------ttccagat-tggcgagcacatca--gggtg-------ctg----------c---a-ag---gg-t----------------------------ggc------acg-
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           7597  82 +     11226 a-------acatccat-t-aa-aa---c---ccata-a----a-cg---atggggccttgagaac------ctctcaga-tgaggaacccctca--aggtg-------cta----------g---c--g---gg-c----------------------------agg------a-ac
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18425167  84 -  18827391 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---gtggggttgggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       11608  84 -     50209 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---gtggggttgggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135418614  84 + 135778131 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---gtggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1907128  84 +   2368649 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---atggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-a----------------------------ggc------acat
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199946800  84 + 200372422 aacatcca--------tc-aa-aa---c---ccaca-a----a-ca---atggggtttggagaag------ctccaggt-tgaggagtccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              33672  84 +     84244 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---atggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Colobus_polykomos.k141_906115                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             26105 107 -     87169 accctcta--------ta-aa-ta---c---tcctcaaac--aga------aggtctcaaagaacttc---tg---ggt-tgttgaatacatca--agagg-------gagg---------g---a-gggt-gg-ta---a-g--cccagac-ag-agagggcagag------aag-
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 4
s Ctenodactylus_gundi.CteGun_scaffold_65                    834386  83 +   1526836 aacccctg--------ct-aa-aa---c---tccaa-a----a-ca---atgggactcaaagagc------ttgcaagt-tggggaccctatca--gagag-------caa----------g---a-ag---gg-t----------------------------agt------gtg-
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12534477  83 -  12879189 aacctcca--------tt-aa-aa---c---cccta-a----a-ca---atggggtttggagtgc------ttccaggt-tggtgagcacatca--aggtg-------ctg----------c---a-ag---gg-t----------------------------ggt------gca-
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  670927  74 +   1390856 --------------------------------------------c------aggtttcagaaaac------tg---ggt-tggtgaacacatcg--aggtg-------ctgg---------g---a-cagt-gg-cgtg--------c-c---tggagagagcatgg------aag-
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 24 I 3
s Diceros_bicornis.DicBicMic_scaffold_5955                    3683  74 +    198055 --------------------------------------------c------aggtttcagaaaac------tg---ggt-tggtgaacacatcg--aggtg-------ctgg---------g---a-cagt-gg-cgtg--------c-c---tggggagagcatgg------aag-
i Diceros_bicornis.DicBicMic_scaffold_5955               I 24 I 3
s Enhydra_lutris.KZ291758.1                               16326946 102 -  41312741 actctcta--------ta-aa-ta---c---cccta-aac--aaa------tggggtcaaagaacttc---tg---gtt-aggttaatacatta--aggtg-------ctg---a------a---a-gggt-gg-tatg--------c-c-cat--aaagggcatgg------aag-
i Enhydra_lutris.KZ291758.1                              C 0 I 3
s Equus_asinus.JREZ01000139.1                              1280976  74 +   4378816 --------------------------------------------t------aggcttcagagaac------tg---gag-tggtgaacacatcg--agggg-------ctg-t--------g---a-caat-gg-catg--------c-c---tgaagacagcatgg------aag-
i Equus_asinus.JREZ01000139.1                            I 24 I 3
s Equus_caballus.CM000403.2                               18528796  74 -  39960074 --------------------------------------------t------aggcttcagagaac------tg---gag-tggtgaacacatcg--agggg-------ctg-t--------g---a-caat-gg-catg--------c-c---tgaagacagcatgg------aag-
i Equus_caballus.CM000403.2                              I 24 I 3
s Equus_przewalskii.KK951119.1                               30811  74 +    498745 --------------------------------------------t------aggcttcagagaac------tg---gag-tggtgaacacatcg--agggg-------ctg-t--------g---a-caat-gg-catg--------c-c---tgaagacagcatgg------aag-
i Equus_przewalskii.KK951119.1                           I 24 I 3
s Erythrocebus_patas.Contig38                             21201809  84 -  21539334 aacctcca--------tc-aa-aa---c---gcaca-a----a-ca---gtggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              10991  83 -     14127 aacctcca--------tt-aa-aa---c---caata-a----a-ca---atggggtttggagtgc------ttccagtt-tggagagcccatca--aggtg-------ctg----------c---a-ag---gg-t----------------------------ggc------agg-
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                3689  83 -     16928 aacctcca--------tt-aa-aa---c---cccta-a----a-ca---atggtgtttgaagtgc------ttccagtt-tggagagcccatca--aggtg-------ctg----------c---a-ag---gg-t----------------------------ggc------agg-
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              12722  83 -     25546 aacctcca--------tt-aa-aa---c---cccta-a----c-ca---atggggtttggagggc------ttccagtt-tggagagcccatta--aggtg-------ctg----------c---a-ag---gg-t----------------------------ggc------agg-
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             9907  83 +     26330 aacctcta--------tt-aa-aa---c---cccta-a----a-ca---atggggtttggagtgc------ttccagtt-tggagagcccatca--aggtg-------ctg----------c---a-ag---gg-t----------------------------ggc------agg-
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 11155  83 +     23973 aacctcca--------tt-aa-aa---c---cccta-a----a-ca---atggtgtttgaagtgc------ttccagtt-tggagagcccatca--aggtg-------ctg----------c---a-ag---gg-t----------------------------ggc------agg-
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 9907  83 +     75513 aacctcta--------tt-aa-aa---c---cccta-a----a-ca---atggggtttggagtgc------ttccagtt-tggagagcccatca--aggtg-------ctg----------c---a-ag---gg-t----------------------------ggc------agg-
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  7858  83 +     97555 aacctcca--------tt-aa-aa---c---cccta-a----a-ca---atggggtttggagtgc------ttccagtt-tggagagcccatca--aggtg-------ctg----------c---a-ag---gg-t----------------------------ggc------agg-
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            10786  83 +     26496 aacttctg--------tt-aa-aa---c---ctcta-a----a-ca---atggggtttggagtgc------ttccagtt-tggagagcccatca--aggtg-------ctg----------c---a-ag---gg-t----------------------------ggc------agg-
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  1391  83 -     17153 aacctcca--------tt-aa-aa---c---cccta-a----a-ca---atggtgtttgaagtgc------ttccagtt-tggagagcccatca--aggtg-------ctg----------c---a-ag---gg-t----------------------------ggc------agg-
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              10967  83 +    111500 aacctcca--------tt-aa-aa---c---caata-a----a-ca---atgtggtttggagtgc------ttccagtt-tggagagcccatca--aggtg-------ctg----------c---a-ag---gg-t----------------------------ggc------agg-
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20234807 102 + 206538554 accctcta--------ta-aa-ta---c---tccta-a-aa-aaa------aggtctcagagaact--tg-tg---ggt-tgttgaatacatca--agagg-------cagg---------g---a-gggt-gg-ta---a-g----c-c-c-ag-agagggcatag------aag-
i Felis_catus.CM001381.2                                 C 0 I 4
s Felis_catus_fca126.CM031415.1                           20193651 102 + 205367284 accctcta--------ta-aa-ta---c---tccta-a-aa-aaa------aggtctcagagaact--tg-tg---ggt-tgttgaatacatca--agagg-------cagg---------g---a-gggt-gg-ta---a-g----c-c-c-ag-agagggcatag------aag-
i Felis_catus_fca126.CM031415.1                          C 0 I 4
s Felis_nigripes.FelNig_flattened_line_20823                  7163 102 -     36744 accctcta--------ta-aa-ta---c---tccta-a-aa-aaa------aggtctccaagaact--tg-tg---ggt-tgttgaatacatca--agagg-------cagg---------g---a-gggt-gg-ta---a-g----c-c-c-ag-agagggcatag------aag-
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 4
s Galago_moholi.ctg2040                                     423256  18 -    453645 AACCTCCA--------CT-AA-AA---c---cca-----------------------------------------------------------------------------------------------------------------------------------------------
i Galago_moholi.ctg2040                                  C 0 I 10
s Galago_senegalensis.k141_631886                              963  18 +     11339 AACCTCCA--------CT-AA-Aa---c---cca-----------------------------------------------------------------------------------------------------------------------------------------------
i Galago_senegalensis.k141_631886                        C 0 I 10
s Galagoides_demidoff.k141_1959596                            4763  18 +      6795 aacttcca--------ct-aa-aa---c---cca-----------------------------------------------------------------------------------------------------------------------------------------------
i Galagoides_demidoff.k141_1959596                       C 0 I 10
s Galeopterus_variegatus.GalVar_scaffold_197845               1211  83 -      3123 aacctcca--------tt-aa-aa---c---cccta-a----a-ta---atggggttcagagagc------actcaggt-tggtgagcacatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------agc------aca-
i Galeopterus_variegatus.GalVar_scaffold_197845          I 181 I 377
s Gorilla_beringei.k141_3596273                              12538  84 -     32273 aacctcca--------tt-aa-aa---c---ccata-a----a-ca---atggggtttggagaag------ctccaggc-tgaggagcccatca--agatg-------cta----------g---a-ag---gg-c----------------------------ggc------acat
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.CYUI03002298.1                              6789  88 -      7222 aacctcca---t----tt-aa-aa---c---ccata-a----a-ca---atggggtttggagaag------ctccaggc-tgaggagcccatca--agatg-------cta----------gccca-ag---gg-c----------------------------ggc------acat
i Gorilla_gorilla.CYUI03002298.1                         I 45 n 84
s Graphiurus_murinus.GraMur_scaffold_10447                   31781  57 +     78134 ---------------------------------------------a---atggtgcttgaagagttc-------caggt-tggtgagcacac----aggtg-------cag----------g---a-ag---gg-c----------------------------agc------tta-
i Graphiurus_murinus.GraMur_scaffold_10447               I 21 C 0
s Hapalemur_alaotrensis.k141_1720546                         42866  93 +     55949 aacctcca--------cc-aa-aa---c---ccctc-a----a-ca---atggggtctggacagc------cttcaggc-tggtgagcacctca--agggg-------ctggtgagcacttc---a-ag---gg-t----------------------------ggt------gca-
i Hapalemur_alaotrensis.k141_1720546                     I 179 I 43
s Hapalemur_gilberti.k141_339145                             25568  93 +     40576 aacctcca--------cc-aa-aa---c---ccctc-a----a-ca---atggggtctggacagc------cttcaggc-tggtgagcacctca--agggg-------ctggtgagcacttc---a-ag---gg-t----------------------------ggt------gca-
i Hapalemur_gilberti.k141_339145                         I 183 I 43
s Hapalemur_griseus.k141_305293                              17486  93 +     29761 aacctcca--------cc-aa-aa---c---ccctc-a----a-ca---atggggtctggacagc------cttcaggc-tggtgagcacctca--agggg-------ctggtgagcacttc---a-ag---gg-t----------------------------ggt------gca-
i Hapalemur_griseus.k141_305293                          I 183 I 43
s Hapalemur_meridionalis.k141_659797                         42883  93 -     73828 aacctcca--------cc-aa-aa---c---ccctc-a----a-ca---atggggtctggacagc------cttcaggc-tggtgagcacctca--agggg-------ctggtgagcacttc---a-ag---gg-t----------------------------ggt------gca-
i Hapalemur_meridionalis.k141_659797                     I 184 I 43
s Hapalemur_occidentalis.k141_380049                         31657  93 -     62596 aacctcca--------cc-aa-aa---c---ccctc-a----a-ca---atggggtctggacagc------cttcaggc-tggtgagcacctca--agggg-------ctggtgagcacttc---a-ag---gg-t----------------------------ggt------gca-
i Hapalemur_occidentalis.k141_380049                     I 179 I 54
s Helogale_parvula.HelPar_flattened_line_2585               239939 106 +    327341 accctcta--------ta-aa-ta---c---tcctc-aac--aaa------aggtttcagaaaacttc---tg---ggt-ttttgaatacatca--agagg-------cagg---------g---a-gggg-gg-ta---a-g--cccagac-ag-agagggcagag------aag-
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 4
s Hoolock_leuconedys.ctg274                                    431381  84 +    630532 aacctcca--------tt-aa-aa---c---ccata-a----a-ca---atggggcttggagaag------ctctaggc-tgaggagcccatca--aggtg-------cta----------g---a-ag---gg-c----------------------------agc------acat
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  42091 102 +     55795 accttcta--------ta-aa-ta---c---tccta-aac--aaa------aggtctcagagaacttc---tg---ggt-tgttgaatacatca--agagg-------cagg---------a---a-gggt-gg-ta---a-g----c-c-c-ag-agaaggcagag------aag-
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 4
s Hylobates_agilis.k141_307679                               14315  84 -     15490 aacctcca--------tt-aa-aa---c---ccata-a----a-ca---atggggcttggagaag------ctctaggc-tgaggagcccatca--agggg-------cta----------g---a-ag---gg-c----------------------------agc------acat
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              56321  84 +     67168 aacctcca--------tt-aa-aa---c---ccata-a----a-ca---atggggcttggagaag------ctctaggc-tgaggagcccatca--agggg-------cta----------g---a-ag---gg-c----------------------------agc------acat
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189539971  84 - 191637585 aacctcca--------tt-aa-aa---c---ccata-a----a-ca---atggggcttggagaag------ctctaggc-tgaggagcccatca--aggtg-------cta----------g---a-ag---gg-c----------------------------agc------acat
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3332864  84 -  11177569 aacctcca--------tt-aa-aa---c---ccata-a----a-ca---atggggcttggagaag------ctctaggc-tgaggagcccatca--aggtg-------cta----------g---a-ag---gg-c----------------------------agc------acat
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7516896  83 -   7955117 agcttcca--------tt-aa-aa---c---tcttt-t----a-aa---ataaggtttggaatgt------ttccaggt-cggtgaacacgttg--gggta-------tgg----------g---g-aa---ga-t----------------------------gga------atg-
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   19740  83 +     31101 aacctcca--------tt-aa-aa---c---ctcta-a----a-ca---atggggtttggagtgc------ttgcaggt-tggagagcacatca--cggtg-------cag----------c---a-ag---gg-t----------------------------ggt------aca-
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15521295  83 -  30322482 aacctcca--------tt-aa-aa---c---cccta-a----a-ca---ctggggtttggagtgc------ttccaggt-tggagagcccatca--aggtg-------ctg----------c---a-ag---gg-t----------------------------ggc------agg-
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        4366  83 +     64341 a-------acctccat-g-aa-aa---c---ccata-a----a-cg---atggggccttgagaac------ctctcgga-tgaggagaccctca--aggtg-------cta----------g---g-cg---gg-c----------------------------agg------a-ac
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           1426  83 +      4941 a-------acctccat-g-aa-aa---c---ccata-a----a-cg---atggggccttgagaac------ctctcgga-tgaggaacccctca--aggtg-------cta----------c---g-cg---gg-c----------------------------agg------a-ac
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4294  83 +     35603 a-------acctccat-g-aa-aa---c---ccgta-a----a-cg---atggggccttgagaac------ctctcgga-tgaggaacccctca--aggtg-------cta----------g---g-cg---gg-c----------------------------agg------a-ac
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    25722  83 +     38576 a-------acctccat-t-aa-aa---c---ccata-a----a-cg---atggggtcctgagaac------ctctcaga-tgaggaacccctca--aggtg-------cca----------g---g-cg---gg-c----------------------------agg------a-ac
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         22419  83 +     66356 a-------acctccat-t-aa-aa---c---ccata-a----a-cg---atggggtcctgagaac------ctctcaga-tgaggaacccctca--aggtg-------cca----------g---g-cg---gg-c----------------------------agg------a-ac
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          8190  70 -     23766 aacctgta--------tt-aa-aa---c---cccta-a----a-ca---atggggtttggactgc------ttccaggt-tggagagcacatca--aggtg-------ctg------------------------------------------------------------------
i Lepilemur_ankaranensis.k141_596936                     C 0 I 12
s Lepilemur_dorsalis.k141_577674                             26137  70 +     45836 aacctgta--------tt-aa-aa---c---cccta-a----a-ca---atggggtttggactgc------ttccaggt-tggagagcacatca--aggtg-------ctg------------------------------------------------------------------
i Lepilemur_dorsalis.k141_577674                         C 0 I 12
s Lepilemur_ruficaudatus.k141_320948                           420  70 -      1719 aacctgta--------tt-aa-aa---c---cccta-a----a-ca---atggggtttgtagtgc------ttccaggt-tggagagcacatca--aggtg-------ctg------------------------------------------------------------------
i Lepilemur_ruficaudatus.k141_320948                     C 0 I 12
s Lepilemur_septentrionalis.k141_185316                      24192  70 +     54090 aacctgta--------tt-aa-aa---c---cccta-a----a-ca---atggggtttggactgc------ttccaggt-tggagagcacatca--aggtg-------ctg------------------------------------------------------------------
i Lepilemur_septentrionalis.k141_185316                  C 0 I 12
s Leptonychotes_weddellii.KB714746.1                       3040079 102 +   3914936 atcctcta--------ta-aa-ta---c---tacta-aac--aaa------aagagtcagagaacttc---tg---ggt-tggggaatgcatca--agatg-------ctgg---------g---a-gggt-gg-tatg--------c-c-c-ag-agagggcatgg------aag-
i Leptonychotes_weddellii.KB714746.1                     C 0 I 4
s Lophocebus_aterrimus.ctg367                              1433739  84 +   1826925 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---gtggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            2659  18 +     11245 aaccttca--------ct-aa-aa---c---cca-----------------------------------------------------------------------------------------------------------------------------------------------
i Loris_lydekkerianus.k141_2539221                       C 0 I 10
s Loris_tardigradus.ctg83                                  1001496  18 +   6120653 aaccttca--------ct-aa-aa---c---cca-----------------------------------------------------------------------------------------------------------------------------------------------
i Loris_tardigradus.ctg83                                C 0 I 10
s Lycaon_pictus.CM007581.1                                17952878 102 -  59628241 gccctcta--------ta-aa-ta---c---cccta-aac--aaa------aggacttagagaacttc---tg---ggt-tggtgaatacatca--agatt-------ctgg---------g---a-ggat-gc-tatg--------c-c-c-ag-aaagggcatgg------aag-
i Lycaon_pictus.CM007581.1                               C 0 I 4
s Macaca_arctoides.k141_2326796                               3560  84 +     40492 aatctcca--------tc-aa-aa---c---ccaca-a----a-ca---gtggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59672814  84 +  60120075 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---gtggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  9316  84 -     26193 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---gtggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            77112  84 -    114318 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---gtggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  2827  84 -     23192 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---gtggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                12279  84 -     29190 aacctcca--------tc-aa-aa---c---ccacc-a----a-ca---gtggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  20847  84 +     37952 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---gtggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186835935  84 + 187317192 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---gtggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-t----------------------------ggc------acat
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25454498  84 -  25927173 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---gcagggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  76696  84 +     89720 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---gtggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 3693  84 +     20474 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---gtggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   3495  84 -     14993 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---gtggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  326365  84 -    668171 aacctcca--------tc-aa-aa---c---ccacc-a----a-ca---gtggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 1797  84 -     24072 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---gtggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               22434  84 -     45290 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---gtggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23933982  84 -  24302211 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---gtggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               348158  84 +    752769 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---gtggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              17099 101 +    737560 aacctcca--------ta-aa-aa---c---cccta-aac--aac------agggctctaaaagcttc---tg---aac-tggtgaaggcatca--ag-gg-------ctgg---------g---t-gtgt-gg-catg--------c-c-cc-aaacagg-catgg------aaa-
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              48484 101 -    317179 aacctcca--------ta-aa-aa---c---cccta-aac--aac------agggctctaaaagcttc---tg---aat-tggtgaatgcatca--ag-gg-------ctg---a------g---t-gtgt-gg-catg--------c-c-cc-aaacagg-catgg------aaa-
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33099208  83 -  40650429 agcttcca--------tt-aa-aa---c---tcttt-t----a-aa---ataaggtttggaatgt------ttccaggt-tggtgagcacattg--gggta-------tgg----------g---g-aa---ga-t----------------------------gga------atg-
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              7654 102 +     13704 accctcta--------ta-aa-ta---c---cccta-aac--aaa------aggggtcaaagaacttc---tg---gtt-aggttaatacatca--aggtg-------ctg---a------a---a-gggt-gg-tatg--------c-c-cataga-agg-catgg------aag-
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 3
s Mico_argentatus.k141_1239457                                2511  83 -      7380 a-------acctccat-t-aa-aa---c---ccata-a----a-tg---atggggccttgagaac------ctgtcgga-tgaggaagccctca--aggtg-------cta----------g---g-cg---gg-c----------------------------agg------a-ac
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               1581  83 +     18990 a-------acctccat-t-aa-aa---c---ccata-a----a-cg---atggggccttgagaac------ctgtcgga-tgaggaagacctca--aggtg-------cta----------g---g-cg---gg-c----------------------------agg------a-ac
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      2516  83 -      7356 a-------acctccat-t-aa-aa---c---ccata-a----a-tg---atggggccttgagaac------ctgtcgga-tgaggaagccctca--aggtg-------cta----------g---g-cg---gg-c----------------------------agg------a-ac
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18288681  83 -  93316391 aacctcca--------tt-aa-aa---c---cccta-a----a-ca---atggggtttggagtgc------ttccagat-tggagagcacatca--aggtg-------gtg----------c---a-ag---gg-c----------------------------gGC------ACC-
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_534055                           5735  84 -     28506 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---gtggggttcggagaag------ctccaggt-tgaggagcccacca--aggtg-------ctg----------g---a-ag---gg-t----------------------------ggc------acat
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         2916 102 -      8324 atcctcta--------ta-aa-ta---c---tacta-aac--aaa------aagagtcagagaacttc---tg---ggt-tggggaatgcatca--agatg-------ctgg---------g---a-gggt-gg-tatg--------c-c-c-ag-agagggcatgg------aag-
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 4
s Mirza_zaza.k141_952172                                      6251  83 -     37649 aacctcca--------tt-aa-aa---c---cccta-a----a-ca---atggggtttggagtgc------ttccagat-tggagagcacatca--aggtg-------ttg----------c---a-ag---gg-t----------------------------ggc------acc-
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 138946  99 -    366855 aatttcca--------ta-aa-cc---c---cctta-agca-a-c------agagttcggagtagt-----gg---gtt-ggttgaactcatcc--aggtt-------ctgg---------g---a-gagt-gg-cctg-------tc-----tggagagg-tgtgc------gag-
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 4
s Mungos_mungo.MunMun_flattened_line_23663                   33042 106 +     37127 accctcta--------ta-aa-ca---c---tcctc-aac--aaa------aggtttcagaaaacttc---tg---ggg-ttttgaatacatca--agagg-------cagg---------g---a-gggg-gg-ta---a-g--cccagac-ag-agagggcagag------aag-
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 4
s Muscardinus_avellanarius.MusAve_scaffold_82313              4033  64 +     14296 ---------------------------------------------a---atggtgaattaagagttccaggttccaggt-tggtgagcagac----aggtg-------cag----------g---a-ag---gg-c----------------------------agc------tta-
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 17 C 0
s Mustela_putorius.JH418006.1                               298835 102 -  14710649 accctcta--------ta-aa-ta---c---cccta-aac--aaa------cggggtcaaagaacttc---tg---gtt-aggttactacatca--aggtg-------ctg---a------a---a-gggt-gg-tatg--------c-c-cat--aaagggcatgg------aag-
i Mustela_putorius.JH418006.1                            C 0 I 3
s Nasalis_larvatus.k141_413338                               11731  83 +     21681 aatctcca--------tc-aa-aa---c---caca--a----a-ta---atggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ttg----------g---a-ag---gg-c----------------------------ggc------acat
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    757528 106 +    783361 aatctcca--------ta-aa-ac---c---cccaa-agca-a-c------agcactgggagaagt-----ag---gtt-ggttgaacacatca--aggttctgggttctgg---------g---a-gggt-gg-catg--------c-c-c--ggcgag-ccaggc------aag-
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 3
s Nyctereutes_procyonoides.CAJHUB010000658.1               9147139 102 -   9404916 accctcta--------ta-aa-ta---c---cccta-aac--aaa------aggacttagagaacttc---tg---ggt-tggtgaatacatca--agatt-------ctgg---------g---a-ggat-gc-tatg--------c-c-c-ag-aaagggcatgg------aag-
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 3
s Nycticebus_bengalensis.LG01                            102576473  18 - 196305487 aacgtcca--------ct-aa-aa---c---cca-----------------------------------------------------------------------------------------------------------------------------------------------
i Nycticebus_bengalensis.LG01                            C 0 I 10
s Nycticebus_coucang.k141_5327727                             4159  18 +      8486 aacgtcca--------ct-aa-aa---c---cca-----------------------------------------------------------------------------------------------------------------------------------------------
i Nycticebus_coucang.k141_5327727                        C 0 I 10
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105746900  18 + 199412804 aacctcca--------ct-aa-aa---c---cca-----------------------------------------------------------------------------------------------------------------------------------------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 10
s Ochotona_princeps.JH802162.1                             1360457  26 +   3988456 AATCTCCA--------GT-AT-AA---C---ATTGA-A----A-AA---AT------------------------------------------------------------------------------------------------------------------------------
i Ochotona_princeps.JH802162.1                           I 417 C 0
s Odobenus_rosmarus.KB229312.1                              504222 102 -   2017862 accctcta--------ta-aa-ta---c---tacta-aac--aaa------aagagtcagagaacttc---ta---ggt-tggggaatgcatca--agatg-------ctgg---------g---a-ggat-gg-tatg--------c-c-c-ag-agagggcatgg------aag-
i Odobenus_rosmarus.KB229312.1                           C 0 I 4
s Otocyon_megalotis.JAEUCK010005147.1                       459893 102 -    559221 accctcta--------ta-aa-ta---c---cccta-aac--aaa------aggacttagagaacttc---tg---ggt-tggtgaatacatca--agatt-------ctg---a------g---a-ggat-gc-tatg--------c-c-c-ag-aaagggcatgg------aag-
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 4
s Otolemur_crassicaudatus.k141_222918                          798  18 +      8798 AACCTCCA--------CT-AA-AA---C---CCa-----------------------------------------------------------------------------------------------------------------------------------------------
i Otolemur_crassicaudatus.k141_222918                    C 0 I 10
s Otolemur_garnettii.GL873799.1                             692965  18 -   1103335 AACCTCCA--------CT-AA-AA---C---CCA-----------------------------------------------------------------------------------------------------------------------------------------------
i Otolemur_garnettii.GL873799.1                          C 0 I 10
s Pan_paniscus.KQ411613.1                                    40656  84 +     80009 aacctcca--------tt-aa-aa---c---ccata-a----a-aa---atggggtttggagaag------cttcaggc-tgaggagcccatca--ggatg-------cta----------g---a-ag---gg-t----------------------------ggc------acat
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189139548  84 + 189151597 aacctcca--------tt-aa-aa---c---ccata-a----a-ca---atgggatttggagaag------ctccaggc-tcaggagcccatca--agatg-------cta----------g---a-ag---gg-c----------------------------agc------acaT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  148815 102 +    230217 accctcta--------ta-aa-ta---c---tccta-aac--aaa------aggtctcagagaact--tg-tg---ggt-tgttgaatacatca--agagg-------cagg---------g---a-gggt-gg-ta---a-g----c-c-c-ag-agaggtcatag------aag-
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 4
s Panthera_pardus.KV860321.1                                262022 102 +  18783137 accctcta--------ta-aa-ta---c---tccta-aac--aaa------aggtctcagagaact--tg-tg---ggt-tgttgaatacatca--agagg-------cagg---------g---a-gggt-gg-ta---a-g----c-c-c-ag-agaggtcatag------aag-
i Panthera_pardus.KV860321.1                             C 0 I 4
s Panthera_tigris.KE722367.1                               4718658 102 -   8748460 accctcta--------ta-aa-ta---c---tccta-aac--aaa------aggtctcagagaact--tg-tg---ggt-tgttgaatacatca--agagg-------cagg---------g---a-gggt-gg-ta---a-g----c-c-c-ag-agaggtcatag------aag-
i Panthera_tigris.KE722367.1                             C 0 I 4
s Papio_anubis.CM001495.2                                183439768  84 + 183742232 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---gtggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             3461  84 +     20448 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---gtggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20560266  84 +  20919399 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---gtggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   2204  84 +     41871 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---gtggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     5490  84 +     27711 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---gtggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  5569  84 +      9205 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---gtggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10275 103 -     78924 accctcta--------ta-aa-ta---c---tccta-aac--aaa------aggtctcagagaacttc---tg---ggt-tgttgactacatca--agagg-------cagg---------g---atgggt-gg-ta---a-g----c-c-c-ag-agagggcagag------aag-
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 4
s Perodicticus_ibeanus.k141_855320                            6667  18 +     13100 aacctttt--------ct-aa-aa---c---cca-----------------------------------------------------------------------------------------------------------------------------------------------
i Perodicticus_ibeanus.k141_855320                       C 0 I 10
s Perodicticus_potto.k141_1092580                             5040  18 +     25941 aacctttt--------ct-aa-aa---c---cca-----------------------------------------------------------------------------------------------------------------------------------------------
i Perodicticus_potto.k141_1092580                        C 0 I 10
s Piliocolobus_badius.k141_1234363                           40244  84 +     62158 aacctcca--------tc-aa-aa---t---ccaca-a----a-ca---atggagtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-at---gg-c----------------------------ggc------acat
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        34966  84 +     89929 aacctcca--------tc-aa-aa---t---ccaca-a----a-ca---atggaatttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-at---gg-c----------------------------ggc------acat
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            36382  84 +     51399 aacctcca--------tc-aa-aa---t---ccaca-a----a-ca---atggaatttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-at---gg-c----------------------------ggc------acat
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14292620  84 -  14605196 aacctcca--------tc-aa-aa---t---ccaca-a----a-ca---atggaatttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-at---gg-c----------------------------ggc------acat
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189127690  84 + 189387572 aacctcca--------tt-aa-aa---c---ccata-a----a-ca---atggggattggagaag------ctccaggt-tgaggagcccatcc--aggtg-------cta----------g---a-ag---gg-c----------------------------agc------acat
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9567298  84 +   9816681 aacctcca--------tt-aa-aa---c---ccata-a----a-ca---atggggattggagaag------ctccaggt-tgaggagcccatcc--aggtg-------cta----------g---a-ag---gg-c----------------------------agc------acat
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               69894  84 -     81375 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---atggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              1714  84 +     19060 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---atggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000849.1                            3563688  93 -   3616207 AACCTCCA--------CC-AA-AA---C---CCCTC-A----A-CA---ATGGGGTCTGGAGAGC------TTTCAGGC-TGGTGAGCACCTCA--AGGGG-------CTGATGAGCACTTC---A-AG---GG-T----------------------------GGT------GCA-
i Prolemur_simus.MPIZ01000849.1                          I 185 I 43
s Propithecus_coquerelli.NW_012148875.1                     987938  83 +   2598838 aacctcCA--------TT-GA-AA---C---CCCTA-A----A-CA---ATGGGGTTTGGAGTGC------TTCCAGGT-TGGAGAGCACATCA--CGGTG-------CAG----------C---A-AG---GG-T----------------------------GGC------ACA-
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          26249  83 +     38485 aacctcca--------tt-ga-aa---c---cccta-a----a-ca---atggggtttggagtgc------ttccaggt-tggagagcacatca--cggtg-------cag----------c---a-ag---gg-t----------------------------ggc------aca-
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             2408  83 +      4256 aacctcca--------tt-ga-aa---c---cccta-a----a-ca---acagggtttggagtgc------ttccaggt-tggagagcacatca--cggtg-------cag----------c---a-ag---gg-t----------------------------ggc------aca-
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          23768  83 +     35766 aacctcca--------tt-ga-aa---c---cccta-a----a-ca---acagggtttggagtgc------ttccaggt-tggagagcacatca--cggtg-------cag----------c---a-ag---gg-t----------------------------ggc------aca-
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           1950  83 -     24134 aatctcca--------tt-ga-aa---c---cccta-a----a-ca---acagggtttggagtgc------ttccaggt-tggagagcacatca--cggtg-------cag----------c---a-ag---gg-t----------------------------ggc------aca-
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        25763  83 -     67325 aacctcca--------tt-ga-aa---c---cccta-a----a-ca---acagggtttggagtgc------ttccaggt-tggagagcacatca--cggtg-------cag----------c---a-ag---gg-t----------------------------ggc------aca-
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           2001  83 -      6182 aacctcca--------tt-ga-aa---c---cccta-a----a-ca---atggggtttggagtgc------ttccaggt-tggagagcacatca--cggtg-------cag----------c---a-ag---gg-t----------------------------ggc------aca-
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            12341  99 -     21811 aatttcca--------ta-aa-ct---c---cccta-agcg-g-c------tgggctcggagaagt-----gg---gtt-ggttggacacatgg--aggtc-------ctag---------g---a-ac-tggg-catg--------c-c---tgga-acggtgtac------aag-
i Pteronotus_parnellii.KE909381.1                        C 0 I 4
s Pteronura_brasiliensis.PteBra_flattened_line_31117         37853 102 +     42204 accctcta--------ta-aa-ta---c---cccta-aac--aaa------tggggtcaaagaacttc---tg---gtt-aggttaatacatca--aggtg-------ctg---a------a---a-gggt-gg-tatg--------c-c---tataaagggcatgg------aag-
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 3
s Puma_concolor.QAVW01001104.1                            20271937 102 -  38429054 accctcta--------ta-aa-ta---c---tccta-aac--aaa------aggtctcagagaact--tg-tg---ggt-tgttgaatacatca--agagg-------cagg---------g---a-gggt-gg-ta---a-g----c-c-c-ag-agagggcatag------aag-
i Puma_concolor.QAVW01001104.1                           C 0 I 4
s Pygathrix_cinerea.k141_1153803                             11725  85 -     91421 aacttcca--------tc-aa-aa---c---ccac--a----aaca---atggggtttggagaag------ctccaggt-tgaggagcccatga--aggtg-------ctg----------g---a-ag---gggc----------------------------ggc------acat
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7605853  85 +   7812017 aacttcca--------tc-aa-aa---c---ccac--a----aaca---atggggtttggagaag------ctccaggt-tgaggagcccatga--aggtg-------ctg----------g---a-ag---gggc----------------------------ggc------acat
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11701  85 -     72585 aacttcca--------tc-aa-aa---c---ccac--a----aaca---atggggtttggagaag------ctccaggt-tgaggagcccatga--aggtg-------ctg----------g---a-ag---gggc----------------------------ggc------acat
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             3409  84 -     11128 aacttccc--------tc-aa-aa---c---ccac--a----aaca---atgggatttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-t----------------------------ggc------acat
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91232764  84 - 195417433 aacttccc--------tc-aa-aa---c---ccac--a----aaca---atggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7668413  84 +   7961872 aacttccc--------tc-aa-aa---c---ccac--a----aaca---atggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-t----------------------------ggc------acat
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_2619299                               4622  70 -      8359 a-------acatccat-t-aa-aa---c---ccata-a----a-cg---atggggccttgagaac------ctctcaga-tgaggaacccctca--aggtg-------cta------------------------------------------------------------------
i Saguinus_bicolor.k141_2619299                          C 0 I 12
s Saguinus_geoffroyi.k141_1413670                            10931  70 -     13588 a-------acctccat-g-aa-aa---c---ccata-g----a-cg---atggggccttgagaac------ctctcgga-tgaggaacccctca--aggtg-------cta------------------------------------------------------------------
i Saguinus_geoffroyi.k141_1413670                        C 0 I 12
s Saguinus_imperator.k141_717981                              4567  83 -      6207 a-------acatccat-t-aa-aa---c---ccata-a----a-cg---atggggccttgagaac------ctctcgga-tgaggaacccctca--aggtg-------cta----------g---g-ca---gg-c----------------------------agg------a-ac
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               10294  83 +     13640 a-------acatccat-t-aa-aa---c---ccata-a----a-cg---atggggccttgagaac------ctctcgga-tgaggaacccctca--aggtg-------cta----------g---g-cg---gg-c----------------------------agg------a-ac
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               5157  83 +      8564 a-------acatccat-t-aa-aa---c---ccata-a----a-cg---atggggccttgagaac------ctctcgga-tgaggaacccctca--aggtg-------cta----------g---g-cg---gg-c----------------------------agg------a-ac
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209465435  70 + 209938924 a-------acatccat-t-aa-aa---c---ccata-a----a-cg---atggggccttgagaac------ctctcgga-tgaggaacccctca--aggtg-------cta------------------------------------------------------------------
i Saguinus_midas.LG03                                    C 0 I 12
s Saguinus_mystax.k141_374627                                 4647  83 -      9399 a-------acatccat-t-aa-aa---c---ccata-a----a-cg---atggggccttgagaac------ctctcgga-tgaggaacccctca--aggtg-------cta----------g---g-cg---gg-c----------------------------agg------a-ac
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 1796  70 +      3421 a-------acctccat-g-aa-aa---c---ccata-g----a-cg---atggggccttgagaac------ctctcgga-tgaggaacccctca--aggtg-------cta------------------------------------------------------------------
i Saguinus_oedipus.k141_63850                            C 0 I 12
s Saimiri_boliviensis.NW_024100920.1                     119947995  67 - 121099817 A-------ACCTCCAT-T-AA-AA---T---CCATA-A----A-TG---ATGGAGTCTTGAGAAT------CTCTCGGA-TGAAGAACCCGTCA--AGGTG----------------------------------------------------------------------------
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       20462  67 +     46362 a-------acctccat-t-aa-aa---t---ccata-a----a-tg---atggggtcttgagaat------ctctcgga-tgaagaacccgtca--aggtg----------------------------------------------------------------------------
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               20557  67 +     45824 a-------acctccat-t-aa-aa---t---ccata-a----a-tg---atggggtcttgagaat------ctctcgga-tgaagaacccgtca--aggtg----------------------------------------------------------------------------
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             37172  67 -     64574 a-------acctccat-t-aa-aa---t---ccata-a----a-tg---atggggtcttgagaat------ctctcgga-tgaagaacccgtca--aggtg----------------------------------------------------------------------------
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                                178  67 -     23631 a-------acctccat-t-aa-aa---t---ccata-a----a-cg---atggggtcttgagaat------ctctcgga-tgaagaacccgtca--aggtg----------------------------------------------------------------------------
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 20450  67 -     61129 a-------acctccat-t-aa-aa---t---ccata-a----a-tg---atggggtcttgagaat------ctctcgga-tgaagaacccgtca--aggtg----------------------------------------------------------------------------
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          16237  84 -     19888 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---atggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      23439  84 +     39453 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---atggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            3965  84 +     27826 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---atggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             3486  84 -     19483 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---atggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      3548  84 +      7198 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---atggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         11808  84 +     15514 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---atggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            188862  95 -    191337 aaccttca--------cc-ca-ga---c---ctcta-a----a-c------agggttcagagaac------tg---gat-gagtgaacacgtgg--aggtg-------ctc---a------g---t-gagt-gg-ca-g-ctg-gg--a-----g-aga--acatgg------aCC-
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 I 3
s Spermophilus_dauricus.KZ294078.1                         1949980  83 -   3870691 agcttcca--------tt-aa-aa---c---tcttt-t----a-aa---ataaggtttggaatgt------ttccaggt-tggtgaacacattg--gggta-------tgg----------g---g-aa---ga-t----------------------------gga------atg-
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             28379 102 +     97271 accctcta--------ca-aa-ta---c---cctta-a--agaaa------aggggtaagagaacttc---tg---ggt-tgatgaatacatca--aggtg-------cta---a------a---g-gggt-gg-tatg--------c-c-c-ag-agagggcaggg------aag-
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 4
s Suricata_suricatta.SurSur_flattened_line_6629              15936 106 -    196729 accctcta--------ta-aa-ta---c---tcctc-aac--aaa------aggtttcagaaaacttc---tg---ggt-ttttgaatacatca--agagg-------cagg---------g---a-gggg-gg-taag-cccag---aca-gtg-ag-gg-cagag------aag-
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 4
s Sus_scrofa.JH118708.1                                      32850  97 -     47482 aacctcca--------tt-aa-aa---a---gttta-aac--aac------agggtttagagaag------tg---ggt-tgaagaaaacactg--aggtg-------ctgg---------g---g-gagt-gg-aatgg-------c------ggagtgg-cagag------aag-
i Sus_scrofa.JH118708.1                                  C 0 I 3
s Symphalangus_syndactylus.tarseq_199                      1090013  84 -   1523678 aacctcca--------tt-aa-aa---c---ccata-a----a-ca---atggggcttggagaag------ctctaggc-tgaggagcccatca--aggtg-------cta----------g---a-ag---gg-c----------------------------gtc------acat
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 8335  82 +     41958 aatttcca--------ta-aa-at---c---ctcta-agca-a-c------agggttcagagacg------gg---gct-ggttgagcacagtg--aggct-------ctg----------g---a-cagt-gg-g----------------------------tgg------aag-
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 3
s Tapirus_indicus.TapInd_scaffold_9301                      116411  75 -    156842 --------------------------------------------c------aggtttcagagaac------tg---ggc-tggtgaacacatca--aggtg-------ctgg---------g---a-cagt-gg-cattg-tctg---a-a---g-acag--catgg------aag-
i Tapirus_indicus.TapInd_scaffold_9301                   I 24 I 3
s Tapirus_terrestris.TapTer_scaffold_755                    384861  74 +    539355 --------------------------------------------t------gggtttcagagaac------tg---ggc-tggtgaacacatca--aggtg-------ctgg---------g---a-cagt-gg-catgtctgaag--aca---g-------catgg------aag-
i Tapirus_terrestris.TapTer_scaffold_755                 I 24 I 3
s Tarsius_lariang.k141_2201908                               12328  84 +     70052 tacctcta--------tt-ga-aa---c---tccta-a----a-ca---atggggtttggtgtat------ttctaggt-tggtaagcacatca--aggtg-------cca----------g---a-at---ag-t----------------------------ggc------actc
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               16633  84 +     25099 tacctcta--------tt-ga-aa---c---tccta-a----a-ca---atggggtttggtgtat------ttctaggt-tggtaagcacatca--aggtg-------cca----------g---a-at---ag-t----------------------------ggc------actc
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186425133  84 + 186847797 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---gtggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          7539  83 -     20410 aacctcca--------tc-aa-aa---c---ccac--a----g-ca---atggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    11734  83 +     15221 aacctcca--------tc-aa-aa---c---ccac--a----g-ca---atggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        7640  83 +     19930 aacctcca--------tc-aa-aa---c---ccac--a----g-ca---atggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       4070  83 -     19997 aacctcca--------tc-aa-aa---c---ccac--a----g-ca---atggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            44189  84 -     60166 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---atggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        11660  84 -     27529 aacctcca--------tc-aa-aa---c---ccac-aa----a-ca---atggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     11602  84 -     18194 aacctcca--------tc-aa-aa---c---ccac-aa----a-ca---atggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           5337  83 -     21137 aacctcca--------tc-aa-aa---c---ccac--a----g-ca---atggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    4040  83 -     10723 aacctcca--------tc-aa-aa---c---ccac--a----g-ca---atggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         3192  83 +      9834 aacctcca--------tc-aa-aa---c---ccac--a----g-ca---atggagtttggagaag------ctccaggt-tgaggagcccatca--aagtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        21507  83 +     32220 aacctcca--------tc-aa-aa---c---ccac--a----g-ca---atggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5935607  83 +   6242583 aacctcca--------tc-aa-aa---c---ccac--a----g-ca---atggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        4854  84 +     20839 aacctcca--------tc-aa-aa---c---ccaca-a----a-ca---atggggtttggagaag------ctccaggt-tgaggagcccatca--aggtg-------ctg----------g---a-ag---gg-c----------------------------ggc------acat
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2152098  81 +   4065304 aatctcca--------ta-aa-aa---c---accga-a----c-cg---atgagattcagagagc------ttccaggt-tgctgagtgcatca--aggtg-------ctg----------g---a-gt---gg-t----------------------------ggc------a---
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     5410  82 -     10553 aatctcca--------ta-aaaaa---t---atcga-a----c-cg---atgagattcagagagc------tttcaggt-tgctgagcacatca--aggtg-------ctg----------g---a-gt---gg-t----------------------------ggc------a---
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4848098 101 -   5085361 actctcta--------ta-aa-ta---c---cccta-aac--aaa------aggagtcagagaacttc---tg---ggt-tagtgaatacatca--cagtg-------ctgg---------g---a-gggt-gg-tatg--------c-c---tg-agacggcatgg------aag-
i Ursus_maritimus.KK499267.1                             C 0 I 4
s Varecia_rubra.k141_590885                                   8629  83 +     50397 agcctcca--------tt-aa-aa---c---cccta-a----a-ca---ctggggtttggagggc------ttccagtc-tggagagcccatca--aggtg-------ctg----------c---a-ag---gg-t----------------------------gac------agg-
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              8684  83 +     24756 agcctcca--------tt-aa-aa---c---cccta-a----a-ca---ctggggtttggagggc------ttccagtc-tggagagcccatca--aggtg-------ctg----------c---a-ag---gg-t----------------------------gac------agg-
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5369534 111 -   5488506 aacttcca--------tt-aa-aa---g---cctta-agc--aac------agggttcagagaac------tg---tgt-tgatgaacacctca--aggtg-------ctgg---------g---c-aagt-gg-catggaagagggcacacctggagagggcatgg------gag-
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  8550 102 -     43706 accctcta--------ta-aa-ta---c---cccta-aac--aaa------aggacttagagaaattc---tg---ggt-tggtgaatacatca--agatt-------ctgg---------g---a-ggat-gc-tatg--------c-c-c-ag-aaagggcatag------aag-
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 4
s Xerus_inauris.XerIna_scaffold_48378                        21359  83 -     24430 aacctcca--------tt-aa-aa---c---tcttt-t----a-aa---ataaggtttggagagt------ttccagat-tggtgagcacattg--gggtg-------ggg----------g---a-aa---ga-t----------------------------gta------aaa-
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          2789 102 +     86975 accctcta--------ta-aa-ta---c---tacta-aac--aaa------aagagtcagagaacttc---tg---ggt-tggggaatgcatca--agatg-------ctgg---------g---a-ggat-gg-tatg--------c-c-c-ag-agagagcatgg------aag-
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 4
e Sapajus_macrocephalus.k141_351809                          54316   0 -     80660 C
e Sapajus_apella.ctg103                                    5419275   0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519   0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188   0 +      1777 C
e Cebus_albifrons.Contig27                                25650611   0 +  26074798 C
e Mus_pahari.LT608297.1                                   31351706   0 -  89631738 C
e Mus_spretus.CM004101.1                                  90749500   0 - 130317789 C
e Mus_musculus.chr8                                       87647421   0 - 129401213 C
e Mus_caroli.LT608237.1                                   84358433   0 - 120012414 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906   0 -     10935 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276   0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      11935   1 +     63895 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383   9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584   0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641   0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553   7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   2809   0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937   0 +    114563 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 70244   0 +    116680 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    10676   0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183  10 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                85637  14 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482  20 -   3329780 I
e Rattus_norvegicus.chr16                                 53567515   0 +  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968   0 +     55207 C
e Pteropus_vampyrus.KN525825.1                             1357734  14 +   4952924 I
e Pteropus_alecto.KB030862.1                              22974644  14 +  28871421 I
e Psammomys_obesus.NESX01036370.1                             6982   0 -     21651 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10240   0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090   0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823   1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384   0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813   0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18191253   0 -  18517816 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690  60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385   0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468   0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491   0 +  44047080 C
e Oryctolagus_cuniculus.CM000791.1                        67144574  44 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387               7328  41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345   0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    76654   0 +    102263 C
e Ondatra_zibethicus.OndZib_scaffold_46174                   21202   0 +     28053 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229   0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831   4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422   0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805   0 +       996 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186890   0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33016   1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456   1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390   1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692   1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520   1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379  13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466   0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363   0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686   0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11257107   0 -  27267610 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009   7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961   0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12179856   0 -  29670104 C
e Meriones_unguiculatus.MerUng_scaffold_7390                 29331   0 +    140813 C
e Megaderma_lyra.MegLyr_scaffold_4542                         8178   0 -    207569 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 88455   4 +     94391 I
e Loxodonta_africana.GL010049.1                            4214777   0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344   0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3730  44 -     14121 I
e Lasiurus_borealis.LasBor_scaffold_32767                    12872  41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650   0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8272963   1 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293   0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626   0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547   0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_29171               41045   0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       109621   0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577   3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491   0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051   0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516   0 +     36099 C
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312   0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689   0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752   0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447   1 -  14770903 I
e Ellobius_talpinus.LOJH01109367.1                            3007   0 -      6299 C
e Ellobius_lutescens.LOEQ01008920.1                          16953   0 -    110024 C
e Elephantulus_edwardii.JH947257.1                         1089268   0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347   0 +    607251 C
e Eidolon_helvum.KE759718.1                                   8374   9 +     11740 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175   0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084   0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495   7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076   0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            61949   0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923   0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569   0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Crocidura_indochinensis.CroInd_scaffold_287352              1624   0 +      4208 I
e Cricetulus_griseus.LT883664.1                           11664758   8 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 47433   0 +     63868 C
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          11837   0 -     20389 C
e Condylura_cristata.JH655891.1                           17547132   5 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            171068   0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15969   0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498   0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            5641   0 -      6351 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291   0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417   0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157   0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465   7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030   0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310   0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682   0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014   0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932   0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376   0 +  48749331 C
e Bison_bison.KN261452.1                                    200171   0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115   0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905   0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440   0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102   7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675   0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691   7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192   0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     66596   1 -     89534 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     67723   0 +     87051 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       3388 1 +     62944 c
s Allenopithecus_nigroviridis.k141_3361533                   11318 1 -     52922 c
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         11252 1 -     28001 c
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          1698 1 -     18505 c
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           2547 1 -     12518 c
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_2038611                             23664 1 +     24414 c
i Alouatta_belzebul.k141_2038611                         C 0 C 0
s Alouatta_caraya.k141_885645                                54428 1 +     54689 c
i Alouatta_caraya.k141_885645                            C 0 C 0
s Alouatta_discolor.k141_2852575                            125014 1 +    125349 c
i Alouatta_discolor.k141_2852575                         C 0 C 0
s Alouatta_juara.k141_1509701                                21359 1 +     25266 c
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                            801 1 +      2906 c
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            14914 1 -     18578 c
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_668256                              17618 1 +     18088 c
i Alouatta_palliata.k141_668256                          C 0 C 0
s Alouatta_puruensis.k141_1253230                              432 1 -      3544 c
i Alouatta_puruensis.k141_1253230                        N 0 C 0
s Alouatta_seniculus.k141_117119                             11651 1 +     50774 c
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  12283 1 -     33861 c
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            12304 1 -     34016 c
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4294699 1 -   5030052 C
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             12305 1 -     34685 c
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               25426 1 -     47192 c
i Aotus_vociferans.k141_344750                           C 0 C 0
s Callibella_humilis.k141_1278103                             2048 1 -     10423 c
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             21535 1 +     31915 c
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            2015 1 +      5267 c
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23587227 1 - 189096842 C
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              8759 1 -     12001 c
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Carlito_syrichta.NW_007259797.1                           142774 1 -    496798 c
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Cebuella_niveiventris.k141_1251222                          6668 1 -     11392 c
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               2766 1 -      7577 c
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         6683 1 -      8605 c
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4472278 1 +   4669795 c
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        10825 1 -     19203 c
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           5247 1 +      8260 c
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           5474 1 +     27781 c
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         5629 1 -     20310 c
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           8613 1 +     29689 c
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            3041 1 +      9989 c
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          11290 1 -     27936 c
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                             172 1 -     17152 c
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38813695 1 +  39242232 c
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21219391 1 -  21565898 c
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       36510 1 -     53127 c
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        3796 1 +      7159 c
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       11313 1 -     27947 c
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         11286 1 +     17596 c
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                           511 1 +     26000 c
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Chiropotes_albinasus.k141_2813271                           7679 1 +     11226 c
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18425251 1 -  18827391 c
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       11692 1 -     50209 c
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135418698 1 + 135778131 C
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1907212 1 +   2368649 c
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199946884 1 + 200372422 c
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              33756 1 +     84244 c
i Colobus_polykomos.k141_906115                          C 0 C 0
s Erythrocebus_patas.Contig38                             21201893 1 -  21539334 c
i Erythrocebus_patas.Contig38                            C 0 C 0
s Gorilla_beringei.k141_3596273                              12622 1 -     32273 c
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186334770 1 + 186649187 c
i Gorilla_gorilla.LT578341.1                             I 84 I 26
s Hoolock_leuconedys.ctg274                                    431465 1 +    630532 c
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_307679                               14399 1 -     15490 c
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              56405 1 +     67168 c
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189540055 1 - 191637585 c
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3332948 1 -  11177569 c
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        4449 1 +     64341 c
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           1509 1 +      4941 c
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4377 1 +     35603 c
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    25805 1 +     38576 c
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         22502 1 +     66356 c
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lophocebus_aterrimus.ctg367                              1433823 1 +   1826925 c
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                               3644 1 +     40492 c
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59672898 1 +  60120075 c
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  9400 1 -     26193 c
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            77196 1 -    114318 c
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  2911 1 -     23192 c
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                12363 1 -     29190 c
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  20931 1 +     37952 c
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186836019 1 + 187317192 c
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25454582 1 -  25927173 c
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  76780 1 +     89720 c
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 3777 1 +     20474 c
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   3579 1 -     14993 c
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  326449 1 -    668171 c
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 1881 1 -     24072 c
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               22518 1 -     45290 c
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23934066 1 -  24302211 c
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               348242 1 +    752769 c
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Mico_argentatus.k141_1239457                                2594 1 -      7380 c
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               1664 1 +     18990 c
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      2599 1 -      7356 c
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Miopithecus_ogouensis.k141_534055                           5819 1 -     28506 c
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Nasalis_larvatus.k141_413338                               11814 1 +     21681 c
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Pan_paniscus.KQ411613.1                                    40740 1 +     80009 c
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189139632 1 + 189151597 C
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                183439852 1 + 183742232 c
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             3545 1 +     20448 c
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20560350 1 +  20919399 c
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   2288 1 +     41871 c
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     5574 1 +     27711 c
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  5653 1 +      9205 c
i Papio_ursinus.k141_3428135                             C 0 C 0
s Piliocolobus_badius.k141_1234363                           40328 1 +     62158 c
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        35050 1 +     89929 c
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            36466 1 +     51399 c
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14292704 1 -  14605196 c
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189127774 1 + 189387572 c
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9567382 1 +   9816681 c
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               69978 1 -     81375 c
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              1798 1 +     19060 c
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Pygathrix_cinerea.k141_1153803                             11810 1 -     91421 c
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7605938 1 +   7812017 c
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11786 1 -     72585 c
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             3493 1 -     11128 c
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91232848 1 - 195417433 c
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7668497 1 +   7961872 c
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_2619299                               4704 1 -      8359 c
i Saguinus_bicolor.k141_2619299                          I 12 C 0
s Saguinus_geoffroyi.k141_1413670                            11013 1 -     13588 c
i Saguinus_geoffroyi.k141_1413670                        I 12 C 0
s Saguinus_imperator.k141_717981                              4650 1 -      6207 c
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               10377 1 +     13640 c
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               5240 1 +      8564 c
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209465517 1 + 209938924 c
i Saguinus_midas.LG03                                    I 12 C 0
s Saguinus_mystax.k141_374627                                 4730 1 -      9399 c
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 1878 1 +      3421 c
i Saguinus_oedipus.k141_63850                            I 12 C 0
s Saimiri_boliviensis.NW_024100920.1                     119948062 1 - 121099817 C
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       20529 1 +     46362 c
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               20624 1 +     45824 c
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             37239 1 -     64574 c
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                                245 1 -     23631 c
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 20517 1 -     61129 c
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          16321 1 -     19888 c
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      23523 1 +     39453 c
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            4049 1 +     27826 c
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             3570 1 -     19483 c
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      3632 1 +      7198 c
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         11892 1 +     15514 c
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1090097 1 -   1523678 c
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_2201908                               12412 1 +     70052 c
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               16717 1 +     25099 c
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186425217 1 + 186847797 c
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          7622 1 -     20410 c
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    11817 1 +     15221 c
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        7723 1 +     19930 c
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       4153 1 -     19997 c
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            44273 1 -     60166 c
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        11744 1 -     27529 c
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     11686 1 -     18194 c
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           5420 1 -     21137 c
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    4123 1 -     10723 c
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         3275 1 +      9834 c
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        21590 1 +     32220 c
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5935690 1 +   6242583 c
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        4938 1 +     20839 c
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
e Otolemur_garnettii.GL873799.1                             692983 10 -   1103335 I
e Otolemur_crassicaudatus.k141_222918                          816 10 +      8798 I
e Galago_senegalensis.k141_631886                              981 10 +     11339 I
e Galago_moholi.ctg2040                                     423274 10 -    453645 I
e Sapajus_macrocephalus.k141_351809                          54316 0 -     80660 C
e Sapajus_apella.ctg103                                    5419275 0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519 0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188 0 +      1777 C
e Cebus_albifrons.Contig27                                25650611 0 +  26074798 C
e Mus_pahari.LT608297.1                                   31351706 0 -  89631738 C
e Mus_spretus.CM004101.1                                  90749500 0 - 130317789 C
e Mus_musculus.chr8                                       87647421 0 - 129401213 C
e Mus_caroli.LT608237.1                                   84358433 0 - 120012414 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906 0 -     10935 C
e Loris_tardigradus.ctg83                                  1001514 10 +   6120653 I
e Loris_lydekkerianus.k141_2539221                            2677 10 +     11245 I
e Perodicticus_potto.k141_1092580                             5058 10 +     25941 I
e Perodicticus_ibeanus.k141_855320                            6685 10 +     13100 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      11935 1 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_17732          2891 4 +     86975 I
e Xerus_inauris.XerIna_scaffold_48378                        21442 0 -     24430 C
e Vulpes_lagopus.VulLag_flattened_line_30954                  8652 4 -     43706 I
e Vicugna_pacos.KN270157.1                                 5369645 0 -   5488506 C
e Varecia_variegata.k141_1128296                              8767 0 +     24756 C
e Varecia_rubra.k141_590885                                   8712 0 +     50397 C
e Ursus_maritimus.KK499267.1                               4848199 4 -   5085361 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383 9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     5492 0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2152179 0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553 7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   2809 0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937 0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    384935 3 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      116486 3 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 70244 0 +    116680 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                 8417 3 +     41958 I
e Sus_scrofa.JH118708.1                                      32947 3 -     47482 I
e Suricata_suricatta.SurSur_flattened_line_6629              16042 4 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             28481 4 +     97271 I
e Spermophilus_dauricus.KZ294078.1                         1950063 0 -   3870691 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_5840            188957 3 -    191337 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    10676 0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                85637 14 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rattus_norvegicus.chr16                                 53567515 0 +  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20272039 4 -  38429054 I
e Pteropus_vampyrus.KN525825.1                             1357734 14 +   4952924 I
e Pteropus_alecto.KB030862.1                              22974644 14 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         37955 3 +     42204 I
e Pteronotus_parnellii.KE909381.1                            12440 4 -     21811 I
e Psammomys_obesus.NESX01036370.1                             6982 0 -     21651 C
e Propithecus_verreauxi.k141_956661                           2084 0 -      6182 C
e Propithecus_tattersalli.k141_790011                        25846 0 -     67325 C
e Propithecus_perrieri.k141_1200571                           2033 0 -     24134 C
e Propithecus_edwardsi.k141_1176054                          23851 0 +     35766 C
e Propithecus_diadema.k141_357118                             2491 0 +      4256 C
e Propithecus_coronatus.k141_347390                          26332 0 +     38485 C
e Propithecus_coquerelli.NW_012148875.1                     988021 0 +   2598838 C
e Prolemur_simus.MPIZ01000849.1                            3563781 43 -   3616207 I
e Procavia_capensis.ProCapCap_scaffold_85530                 10240 0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823 1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813 0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18191253 0 -  18517816 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10378 4 -     78924 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4718760 4 -   8748460 I
e Panthera_pardus.KV860321.1                                262124 4 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  148917 4 +    230217 I
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       459995 4 -    559221 I
e Oryctolagus_cuniculus.CM000791.1                        67144574 44 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    76654 0 +    102263 C
e Ondatra_zibethicus.OndZib_scaffold_46174                   21202 0 +     28053 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              504324 4 -   2017862 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1360483 0 +   3988456 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105746918 10 + 199412804 I
e Nycticebus_coucang.k141_5327727                             4177 10 +      8486 I
e Nycticebus_bengalensis.LG01                            102576491 10 - 196305487 I
e Nyctereutes_procyonoides.CAJHUB010000658.1               9147241 3 -   9404916 I
e Noctilio_leporinus.NocLep_scaffold_251                    757634 3 +    783361 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805 0 +       996 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186890 0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33016 1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456 1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390 1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692 1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               298937 3 -  14710649 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4097 0 +     14296 C
e Murina_feae.MurFea_scaffold_85699                           5520 1 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   33148 4 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 139045 4 -    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Mirza_zaza.k141_952172                                      6334 0 -     37649 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         3018 4 -      8324 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686 0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11257107 0 -  27267610 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009 7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Microcebus_murinus.CM007674.1                           18288764 0 -  93316391 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12179856 0 -  29670104 C
e Meriones_unguiculatus.MerUng_scaffold_7390                 29331 0 +    140813 C
e Mellivora_capensis.MelCap_flattened_line_69365              7756 3 +     13704 I
e Megaderma_lyra.MegLyr_scaffold_4542                         8178 0 -    207569 C
e Marmota_marmota.CZRN01000018.1                          33099291 0 -  40650429 C
e Manis_pentadactyla.KN006162.1                              48585 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              17200 0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 88455 4 +     94391 I
e Lycaon_pictus.CM007581.1                                17952980 4 -  59628241 I
e Loxodonta_africana.GL010049.1                            4214777 0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3730 44 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3040181 4 +   3914936 I
e Lepilemur_septentrionalis.k141_185316                      24262 12 +     54090 I
e Lepilemur_ruficaudatus.k141_320948                           490 12 -      1719 I
e Lepilemur_dorsalis.k141_577674                             26207 12 +     45836 I
e Lepilemur_ankaranensis.k141_596936                          8260 12 -     23766 I
e Lemur_catta.scaffold_24                                 15521378 0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8272963 1 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Indri_indri.k141_3655594                                   19823 0 +     31101 C
e Ictidomys_tridecemlineatus.JH393364.1                    7516979 0 -   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547 0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  42193 4 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_29171               41045 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       109621 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491 0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               240045 4 +    327341 I
e Hapalemur_occidentalis.k141_380049                         31750 54 -     62596 I
e Hapalemur_meridionalis.k141_659797                         42976 43 -     73828 I
e Hapalemur_griseus.k141_305293                              17579 43 +     29761 I
e Hapalemur_gilberti.k141_339145                             25661 43 +     40576 I
e Hapalemur_alaotrensis.k141_1720546                         42959 43 +     55949 I
e Graphiurus_murinus.GraMur_scaffold_10447                   31838 0 +     78134 C
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Galeopterus_variegatus.GalVar_scaffold_197845               1294 377 -      3123 I
e Galagoides_demidoff.k141_1959596                            4781 10 +      6795 I
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  7265 4 -     36744 I
e Felis_catus_fca126.CM031415.1                           20193753 4 + 205367284 I
e Eulemur_sanfordi.k141_1122526                              11050 0 +    111500 C
e Eulemur_rufus.k141_1476633                                  1474 0 -     17153 C
e Eulemur_rubriventer.k141_571033                            10869 0 +     26496 C
e Eulemur_mongoz.k141_232305                                  7941 0 +     97555 C
e Eulemur_macaco.k141_1562045                                 9990 0 +     75513 C
e Eulemur_fulvus.k141_544389                                 11238 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                             9990 0 +     26330 C
e Eulemur_coronatus.k141_885031                              12805 0 -     25546 C
e Eulemur_collaris.k141_377015                                3772 0 -     16928 C
e Eulemur_albifrons.k141_342033                              11074 0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Equus_przewalskii.KK951119.1                               30885 3 +    498745 I
e Equus_caballus.CM000403.2                               18528870 3 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1281050 3 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2144447 1 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16327048 3 -  41312741 I
e Ellobius_talpinus.LOJH01109367.1                            3007 0 -      6299 C
e Ellobius_lutescens.LOEQ01008920.1                          16953 0 -    110024 C
e Elephantulus_edwardii.JH947257.1                         1089268 0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Eidolon_helvum.KE759718.1                                   8374 9 +     11740 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084 0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    3757 3 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  671001 3 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8628495 7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Daubentonia_madagascariensis.ctg71                      12534560 0 -  12879189 C
e Dasypus_novemcinctus.JH564415.1                            61949 0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834469 0 +   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129             26212 4 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_287352              1624 0 +      4208 I
e Cricetulus_griseus.LT883664.1                           11664758 8 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 47433 0 +     63868 C
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          11837 0 -     20389 C
e Condylura_cristata.JH655891.1                           17547132 5 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            171068 0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15969 0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498 0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           13738 0 +     57038 C
e Cheirogaleus_major.k141_333249                             18389 0 -     52598 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            5641 0 -      6351 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634            176 3 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99291 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157 0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     90440 3 +    217609 I
e Castor_canadensis.CasCan_scaffold_2074                    135387 0 +    179628 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465 7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18498040 4 +  63665305 I
e Canis_lupus_familiaris.chr16                            17956740 4 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9032475 4 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    183089 4 -    185531 I
e CanFam4.chr16                                           17797032 4 -  60362399 I
e Camelus_ferus.KB017975.1                                  400885 0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2332609 0 -   7040546 C
e Camelus_bactrianus.KN276810.1                           10000145 0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              51598 0 +     85213 C
e Avahi_laniger.k141_765380                                  50969 0 -     92717 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102 7 +     43469 I
e Arctocebus_calabarensis.k141_288239                        16452 10 +     17124 I
e Aplodontia_rufa.AprRuf_scaffold_68852                       8928 0 +     20879 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691 7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     66596 1 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             77068 4 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9508293 4 -  29979442 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     67723 0 +     87051 C
e Acinonyx_jubatus.LLWD01001279.1                           825043 4 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       3389 26 +     62944 cagggagC--ATGT--GGG-AG---CCCCA--------CG-CA
s Acinonyx_jubatus.LLWD01001279.1                           825047  3 -   1699592 ---------------------------------------a-ct
i Acinonyx_jubatus.LLWD01001279.1                        I 4 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9508297  3 -  29979442 ---------------------------------------a-ca
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 4 C 0
s Ailurus_fulgens.LNAC01001112.1                             77072  3 -    347723 ---------------------------------------a-ta
i Ailurus_fulgens.LNAC01001112.1                         I 4 C 0
s Allenopithecus_nigroviridis.k141_3361533                   11319 26 -     52922 cagggaat--gtgt--ggg-ag---cccca--------gg-ca
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         11253 26 -     28001 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          1699 26 -     18505 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           2548 26 -     12518 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_2038611                             23665 26 +     24414 tagggagt--gtgt--gga-ag---gtcca--------tg-ca
i Alouatta_belzebul.k141_2038611                         C 0 N 0
s Alouatta_caraya.k141_885645                                54429 26 +     54689 tagggagt--gtgt--gga-ag---ctcca--------tg-cA
i Alouatta_caraya.k141_885645                            C 0 C 0
s Alouatta_discolor.k141_2852575                            125015 26 +    125349 tagggagt--gtgt--gga-ag---ctcca--------tg-cA
i Alouatta_discolor.k141_2852575                         C 0 N 0
s Alouatta_juara.k141_1509701                                21360 26 +     25266 tagggagt--gtgt--ggc-ag---ctcca--------tg-cA
i Alouatta_juara.k141_1509701                            C 0 I 258
s Alouatta_macconnelli.k141_1406484                            802 26 +      2906 tagggagt--gtgt--ggc-ag---ctcca--------tg-ca
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            14915 26 -     18578 tagggagt--gtgt--ggc-ag---ctcca--------tg-ca
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_668256                              17619 26 +     18088 tagggaga--gtgt--ggc-ag---ctcca--------tg-cA
i Alouatta_palliata.k141_668256                          C 0 N 0
s Alouatta_puruensis.k141_1253230                              433 26 -      3544 cagagagc--gtgt--ggc-ag---ctcca--------tg-ca
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             11652 26 +     50774 tagggagt--gtgt--ggc-ag---ctcca--------tg-ca
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  12284 26 -     33861 cagggagc--gtgt--ggc-ag---ctctg--------tg-ca
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            12305 26 -     34016 cagggagc--gtgt--ggc-ag---ctctg--------tg-ca
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4294700 26 -   5030052 CAGGGAGC--GTGT--GGC-Ag---ctctg--------tg-ca
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             12306 26 -     34685 cagggagc--gtgt--ggc-ag---ctctg--------tg-ca
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               25427 26 -     47192 cagggagc--gtgt--ggc-ag---ctctg--------tg-ca
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       8928 28 +     20879 cctacaga--aggcatgga-ag---ctcca--------tg-ca
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Avahi_laniger.k141_765380                                  50969 21 -     92717 cc-----c--aagc--tcacag---ctcca--------tg-c-
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              51598 21 +     85213 cc-----c--aagc--tcgcag---ctcca--------tg-c-
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             2049 26 -     10423 cagggagc--gtgt--ggc-ag---ctcca--------gg-ca
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             21536 26 +     31915 cagggagt--gtgt--ggc-ag---ctgca--------gg-tg
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            2016 26 +      5267 cagggagc--gtgt--ggc-ag---ctcca--------gg-ca
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23587228 26 - 189096842 CAGGGAGC--GTGT--GGC-AG---CTCCA--------GG-CA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              8760 26 -     12001 cagggagc--gtgt--ggc-ag---ctcca--------gg-ca
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s CanFam4.chr16                                           17797036  3 -  60362399 ---------------------------------------a-ca
i CanFam4.chr16                                          I 4 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    183093  3 -    185531 ---------------------------------------a-ca
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 4 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9032479  3 -   9314153 ---------------------------------------a-ca
i Canis_lupus_dingo.QKWQ01000480.1                       I 4 C 0
s Canis_lupus_familiaris.chr16                            17956744  3 -  59632846 ---------------------------------------a-ca
i Canis_lupus_familiaris.chr16                           I 4 C 0
s Canis_lupus_orion.HG994398.1                            18498044  3 +  63665305 ---------------------------------------a-ca
i Canis_lupus_orion.HG994398.1                           I 4 C 0
s Camelus_bactrianus.KN276810.1                           10000145  2 -  17673402 tc-----------------------------------------
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2332609  2 -   7040546 tc-----------------------------------------
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  400885  2 -   1652518 tc-----------------------------------------
i Camelus_ferus.KB017975.1                               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           142775 26 -    496798 cagagagg--gcat--ggc-aa---cccca--------cg-cA
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    135387 35 +    179628 -ccagaga--ggatatgga-ag---ttccacaagcacaca-ca
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 2
s Catagonus_wagneri.CatWag_scaffold_2839                     90443  3 +    217609 ---------------------------------------g-ca
i Catagonus_wagneri.CatWag_scaffold_2839                 I 3 C 0
s Cebuella_niveiventris.k141_1251222                          6669 26 -     11392 cagggagc--gtgt--ggc-ag---ctcca--------gg-ca
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               2767 26 -      7577 cagggagc--gtgt--ggc-ag---ctcca--------gg-ca
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         6684 26 -      8605 cagagagg--gcat--ggc-aa---cccca--------tg-ca
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12229152  4 +  27778364 ---------------------------------------tgcg
i Ceratotherium_simum.JH767749.1                         I 3 I 2
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634            179  4 -     25243 ---------------------------------------tgcg
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 3 I 2
s Cercocebus_atys.KQ010504.1                               4472279 26 +   4669795 cagggagt--GTGT--GGG-AG---CCCCA--------GG-CA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        10826 26 -     19203 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           5248 26 +      8260 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           5475 26 +     27781 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         5630 26 -     20310 cagggaat--gttt--ggg-ag---cccca--------gg-ca
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           8614 26 +     29689 cagggaat--gtgt--ggg-ag---cccca--------gg-ca
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            3042 26 +      9989 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          11291 26 -     27936 cagggaat--gtgt--ggg-ag---cccca--------gg-ca
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                             173 26 -     17152 cagggaat--gtgt--ggg-ag---cccca--------gg-ta
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38813696 26 +  39242232 cagggaat--gttt--ggg-ag---cccca--------gg-ca
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21219392 26 -  21565898 cagggaat--gtgt--ggg-ag---cccca--------gg-ta
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       36511 26 -     53127 cagggaat--gtgt--ggg-ag---cccca--------gg-ta
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        3797 26 +      7159 cagggaat--gttt--ggg-ag---cccca--------gg-ca
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       11314 26 -     27947 cagggaat--gtgt--ggg-ag---cccca--------gg-ta
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         11287 26 +     17596 cagggaat--gtgt--ggg-ag---cccca--------gg-ta
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                           512 26 +     26000 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             18389 27 -     52598 tgggcagc--aggc--acgcag---ctcca--------tg-ca
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           13738 27 +     57038 tgggcagc--aggc--acgcag---ctcca--------tg-ca
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           7680 26 +     11226 cagggagc--gtgt--ggc-ag---ctcca--------gg-ca
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18425252 26 -  18827391 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       11693 26 -     50209 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135418699 26 + 135778131 CAGGGAGT--GTGT--GGG-AG---CCCCA--------GG-CA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1907213 26 +   2368649 cAGCGAGT--GTGT--GGG-AG---cccca--------gg-ca
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199946885 26 + 200372422 cagcgagt--gtgt--ggg-ag---cccca--------gg-ca
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              33757 26 +     84244 tagcgagt--gtgt--ggg-ag---cccca--------gg-ca
i Colobus_polykomos.k141_906115                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             26216  3 -     87169 ---------------------------------------a-ct
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 4 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    834469 28 +   1526836 tccaaaga--agacacaga-aa---ttcca--------tg-ta
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 2
s Daubentonia_madagascariensis.ctg71                      12534560 27 -  12879189 ctggcagg--aggc--atgcag---ctcca--------tg-ca
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  671004  4 +   1390856 ---------------------------------------tgca
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 3 I 2
s Diceros_bicornis.DicBicMic_scaffold_5955                    3760  4 +    198055 ---------------------------------------tgtg
i Diceros_bicornis.DicBicMic_scaffold_5955               I 3 I 2
s Enhydra_lutris.KZ291758.1                               16327051  3 -  41312741 ---------------------------------------a-ta
i Enhydra_lutris.KZ291758.1                              I 3 C 0
s Equus_asinus.JREZ01000139.1                              1281053  4 +   4378816 ---------------------------------------tgca
i Equus_asinus.JREZ01000139.1                            I 3 I 2
s Equus_caballus.CM000403.2                               18528873  4 -  39960074 ---------------------------------------tgca
i Equus_caballus.CM000403.2                              I 3 I 2
s Equus_przewalskii.KK951119.1                               30888  4 +    498745 ---------------------------------------tgca
i Equus_przewalskii.KK951119.1                           I 3 I 2
s Erythrocebus_patas.Contig38                             21201894 26 -  21539334 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              11074 27 -     14127 caggcagc--aggc--acgcag---ctgca--------tg-ca
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                3772 27 -     16928 caggcagc--aggc--acgcag---ctgca--------tg-ca
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              12805 27 -     25546 caggcagc--aggc--acgcag---ctgca--------cg-cg
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                             9990 27 +     26330 caggcagc--aggc--acgcag---ctgca--------tg-ca
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 11238 27 +     23973 caggcagc--aggc--acgcag---ctgca--------tg-ca
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                 9990 27 +     75513 caggcagc--aggc--acgcag---ctgca--------tg-ca
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  7941 27 +     97555 caggcagc--aggc--acgcag---ctgca--------tg-ca
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            10869 27 +     26496 caggcagc--aggc--acgcag---ctgca--------tg-ca
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  1474 27 -     17153 caggcagc--aggc--acgcag---ctgca--------tg-ca
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              11050 27 +    111500 caggcagc--aggc--acgcag---ctgca--------tg-ca
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20234913  3 + 206538554 ---------------------------------------a-ct
i Felis_catus.CM001381.2                                 I 4 C 0
s Felis_catus_fca126.CM031415.1                           20193757  3 + 205367284 ---------------------------------------a-ct
i Felis_catus_fca126.CM031415.1                          I 4 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  7269  3 -     36744 ---------------------------------------a-ct
i Felis_nigripes.FelNig_flattened_line_20823             I 4 C 0
s Galeopterus_variegatus.GalVar_scaffold_266699               1538 28 +      2098 cctggaga--ggacatgga-ag---ctcca--------tg-ca
i Galeopterus_variegatus.GalVar_scaffold_266699          I 83 C 0
s Gorilla_beringei.k141_3596273                              12623 26 -     32273 cagggagc--gtgt--ggg-ag---cccca--------tg-ca
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.CYUI03001814.1                             29133 27 -     31004 cagggagc--gtgt--ggg-ag-c-cccca--------tg-ca
i Gorilla_gorilla.CYUI03001814.1                         I 168 I 34
s Graphiurus_murinus.GraMur_scaffold_10447                   31838 28 +     78134 cctagaga--aagcaagga-cg---ctccc--------tg-ca
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 7
s Hapalemur_alaotrensis.k141_170648                           4131 27 -     19426 caggcagt--aggc--acgcag---ctgca--------tg-ca
i Hapalemur_alaotrensis.k141_170648                      I 83 C 0
s Hapalemur_gilberti.k141_488810                              9275 27 -     15286 caggcagt--aggc--acgcag---ctgca--------tg-ca
i Hapalemur_gilberti.k141_488810                         I 83 C 0
s Hapalemur_griseus.k141_1511508                             10913 27 +     18253 caggcagt--aggc--acgcag---ctgca--------tg-ca
i Hapalemur_griseus.k141_1511508                         I 83 C 0
s Hapalemur_meridionalis.k141_248335                         11016 27 -     41752 caggcagc--aggc--acgcag---ctgca--------tg-ca
i Hapalemur_meridionalis.k141_248335                     I 83 C 0
s Hapalemur_occidentalis.k141_907772                         10849 27 -     16460 caggcagc--aggc--atacag---ctgca--------tg-ca
i Hapalemur_occidentalis.k141_907772                     I 83 C 0
s Helogale_parvula.HelPar_flattened_line_2585               240049  3 +    327341 ---------------------------------------a-ct
i Helogale_parvula.HelPar_flattened_line_2585            I 4 C 0
s Hoolock_leuconedys.ctg274                                    431466 26 +    630532 cagggagc--atgt--ggg-ag---cccca--------tg-ca
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  42197  3 +     55795 ---------------------------------------a-ct
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 4 C 0
s Hylobates_agilis.k141_307679                               14400 26 -     15490 cagggagc--atgt--ggg-ag---cccca--------cg-ca
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              56406 26 +     67168 cagggagc--atgt--ggg-ag---cccca--------cg-ca
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189540056 26 - 191637585 cagggagc--atgt--ggg-ag---cccca--------cg-ca
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3332949 26 -  11177569 cagggagc--atgt--ggg-ag---cccca--------cg-ca
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7516979 28 -   7955117 cctacaga--aggtataga-ag---ctccc--------tt-cg
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   19823 25 +     31101 t-ggccgc--aaac--tcacag---ctcca--------tg-c-
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15521378 27 -  30322482 caggcagc--aggc--atgcag---ctgca--------tg-ca
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        4450 26 +     64341 cagggagc--gtgt--ggc-ag---ctcca--------gg-ca
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           1510 26 +      4941 cagggagc--gtgt--ggc-ag---ctcca--------gg-ca
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4378 26 +     35603 cagggagc--gtgt--ggc-ag---ctcca--------gg-ca
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    25806 26 +     38576 cagggagc--gtgt--ggc-ag---ctccg--------gg-ca
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         22503 26 +     66356 cagggagc--gtgt--ggc-ag---ctccg--------gg-ca
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          8272 27 -     23766 tgggtagc--aggc--atgaag---ctcca--------tg-ta
i Lepilemur_ankaranensis.k141_596936                     I 12 C 0
s Lepilemur_dorsalis.k141_577674                             26219 27 +     45836 tgggtagc--aggc--atgaag---ctcca--------tg-ta
i Lepilemur_dorsalis.k141_577674                         I 12 C 0
s Lepilemur_ruficaudatus.k141_320948                           502 27 -      1719 cgtgtagc--aggc--ataatg---ctcca--------tg-ta
i Lepilemur_ruficaudatus.k141_320948                     I 12 C 0
s Lepilemur_septentrionalis.k141_185316                      24274 27 +     54090 tgggtagc--aggc--atgaag---ctcca--------tg-ta
i Lepilemur_septentrionalis.k141_185316                  I 12 C 0
s Leptonychotes_weddellii.KB714746.1                       3040185  3 +   3914936 ---------------------------------------a-ca
i Leptonychotes_weddellii.KB714746.1                     I 4 I 11
s Lophocebus_aterrimus.ctg367                              1433824 26 +   1826925 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17952984  3 -  59628241 ---------------------------------------a-ca
i Lycaon_pictus.CM007581.1                               I 4 C 0
s Macaca_arctoides.k141_2326796                               3645 26 +     40492 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59672899 26 +  60120075 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  9401 26 -     26193 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            77197 26 -    114318 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  2912 26 -     23192 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                12364 26 -     29190 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  20932 26 +     37952 cagggagt--gtgt--ggg-ag---tccca--------gg-ca
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186836020 26 + 187317192 cagggagt--gtgt--ggg-ag---cccCA--------GG-CA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25454583 26 -  25927173 cagggagT--GTGT--GGG-AG---CCCCA--------GG-CA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  76781 26 +     89720 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 3778 26 +     20474 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   3580 26 -     14993 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  326450 26 -    668171 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 1882 26 -     24072 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               22519 26 -     45290 cagggagt--gtgt--ggg-ag---tccca--------gg-ca
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23934067 26 -  24302211 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               348243 26 +    752769 cagggagg--gtgt--ggg-ag---cccca--------gg-ca
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              17200  3 +    737560 ccc----------------------------------------
i Manis_javanica.JSZB01003497.1                          C 0 I 3
s Manis_pentadactyla.KN006162.1                              48585  3 -    317179 ccc----------------------------------------
i Manis_pentadactyla.KN006162.1                          C 0 I 3
s Marmota_marmota.CZRN01000018.1                          33099291 28 -  40650429 cctacaga--aggtataga-ag---ctccc--------tt-ca
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              7759  3 +     13704 ---------------------------------------a-ta
i Mellivora_capensis.MelCap_flattened_line_69365         I 3 C 0
s Mico_argentatus.k141_1239457                                2595 26 -      7380 cagggagc--gtgt--ggc-ag---ctcca--------gg-ca
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               1665 26 +     18990 cagggagc--gtgt--ggc-ag---ctcca--------gg-ca
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      2600 26 -      7356 cagggagc--gtgt--ggc-ag---ctcca--------gg-ca
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18288764 27 -  93316391 TGGGCAGC--AGGC--AAGAAG---CTTCA--------TG-CA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_534055                           5820 26 -     28506 caaggagt--gtct--ggg-ag---cccca--------gg-ca
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         3022  3 -      8324 ---------------------------------------a-ca
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 4 I 11
s Mirza_zaza.k141_952172                                      6334 27 -     37649 tgggcagc--aggc--aagaag---cttca--------tg-ca
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 139049  3 -    366855 ---------------------------------------g-cc
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 4 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   33152  3 +     37127 ---------------------------------------a-ct
i Mungos_mungo.MunMun_flattened_line_23663               I 4 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              4097 28 +     14296 tgtagaga--aggtgagaa-ag---ctccc--------tc-ca
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 2
s Mustela_putorius.JH418006.1                               298940  3 -  14710649 ---------------------------------------a-ta
i Mustela_putorius.JH418006.1                            I 3 C 0
s Nasalis_larvatus.k141_413338                               11815 26 +     21681 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    757637  3 +    783361 ---------------------------------------a-ca
i Noctilio_leporinus.NocLep_scaffold_251                 I 3 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9147244  3 -   9404916 ---------------------------------------a-ca
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 3 C 0
s Odobenus_rosmarus.KB229312.1                              504328  3 -   2017862 ---------------------------------------a-ca
i Odobenus_rosmarus.KB229312.1                           I 4 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       459999  3 -    559221 ---------------------------------------a-ca
i Otocyon_megalotis.JAEUCK010005147.1                    I 4 C 0
s Pan_paniscus.KQ411613.1                                    40741 26 +     80009 cAGGGAGC--GTGT--GGG-AG---CCTCA--------TG-CA
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189139633 26 + 189151597 CAGGGAGC--GTGT--GGG-AG---CCCCA--------TG-CA
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  148921  3 +    230217 ---------------------------------------a-ct
i Panthera_onca.PanOnc_flattened_line_3271               I 4 C 0
s Panthera_pardus.KV860321.1                                262128  3 +  18783137 ---------------------------------------a-ct
i Panthera_pardus.KV860321.1                             I 4 C 0
s Panthera_tigris.KE722367.1                               4718764  3 -   8748460 ---------------------------------------a-ct
i Panthera_tigris.KE722367.1                             I 4 C 0
s Papio_anubis.CM001495.2                                183439853 26 + 183742232 cagggagt--gtgt--ggg-ag---cccCA--------GG-CA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             3546 26 +     20448 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20560351 26 +  20919399 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   2289 26 +     41871 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     5575 26 +     27711 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  5654 26 +      9205 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10382  3 -     78924 ---------------------------------------a-ct
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 4 C 0
s Piliocolobus_badius.k141_1234363                           40329 26 +     62158 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        35051 26 +     89929 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            36467 26 +     51399 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14292705 26 -  14605196 cagggagt--gtgt--ggg-ag---cccCA--------GG-CA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189127775 26 + 189387572 cAGGGAGC--GTGT--GGG-AG---CCCCA--------CG-CA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9567383 26 +   9816681 cagggagc--gtgt--ggg-ag---cccca--------cg-ca
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               69979 26 -     81375 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              1799 26 +     19060 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2594029 27 -   4620579 caggcagc--aggc--acGCAG---CTGCA--------TG-CA
i Prolemur_simus.MPIZ01000396.1                          I 83 C 0
s Propithecus_coquerelli.NW_012148875.1                     988021 25 +   2598838 C-GGCAGC--AGGC--TCGCAG---CTCCA--------TG-C-
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          26332 25 +     38485 c-ggcagc--aggc--tcgcag---ctcca--------tg-c-
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             2491 25 +      4256 c-ggcagc--aggc--ttgcag---ctcca--------tg-c-
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          23851 25 +     35766 c-ggcagc--aggc--ttgcag---ctcca--------tg-c-
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           2033 25 -     24134 c-ggcagc--aggc--tcgcag---ctcca--------tg-c-
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        25846 25 -     67325 c-ggcagc--aggc--tcgcag---ctcca--------tg-c-
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           2084 25 -      6182 t-ggcagc--aggc--tcgcag---ctcca--------tg-c-
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            12444  3 -     21811 ---------------------------------------g-ca
i Pteronotus_parnellii.KE909381.1                        I 4 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         37958  3 +     42204 ---------------------------------------a-ta
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 3 C 0
s Puma_concolor.QAVW01001104.1                            20272043  3 -  38429054 ---------------------------------------a-ct
i Puma_concolor.QAVW01001104.1                           I 4 C 0
s Pygathrix_cinerea.k141_1153803                             11811 26 -     91421 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7605939 26 +   7812017 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11787 26 -     72585 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             3494 26 -     11128 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91232849 26 - 195417433 cagGGAGT--GTGT--GGG-AG---CCCCA--------GG-CA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7668498 26 +   7961872 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_2619299                               4705 26 -      8359 cagggagc--gtgt--ggc-ag---ctcca--------gg-ca
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            11014 26 -     13588 cagggagc--gtgt--ggc-ag---ctcca--------gg-ca
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              4651 26 -      6207 cagggagc--gtgt--ggc-ag---ctcca--------gg-ca
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               10378 26 +     13640 cagggagc--gtgt--ggc-ag---ctcta--------gg-ca
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               5241 26 +      8564 cagggagc--gtgt--ggc-ag---ctcca--------gg-ca
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209465518 26 + 209938924 cagggagc--atgt--ggc-ag---ctcca--------gg-ca
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 4731 26 -      9399 cagggagc--gtgt--ggc-ag---ctcca--------gg-ca
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 1879 26 +      3421 cagggagc--gtgt--ggc-ag---ctcca--------gg-ca
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119948063 26 - 121099817 CAGGAAGT--GTGC--GGC-AG---CTCCG--------TG-CA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       20530 26 +     46362 caggaagt--gtgc--ggc-ag---ctccg--------tg-ca
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               20625 26 +     45824 caggaagt--gtgc--ggc-ag---ctccg--------tg-ca
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             37240 26 -     64574 caggaagt--gtgc--ggc-ag---ctccg--------tg-ca
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                                246 26 -     23631 caggaagt--gtgc--ggc-ag---ctccg--------tg-ca
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 20518 26 -     61129 caggaagt--gtgc--ggc-ag---ctccg--------tg-ca
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          16322 26 -     19888 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      23524 26 +     39453 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            4050 26 +     27826 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             3571 26 -     19483 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      3633 26 +      7198 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         11893 26 +     15514 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            188960  3 -    191337 ---------------------------------------G-CA
i Solenodon_paradoxus.SolPar_flattened_line_5840         I 3 C 0
s Spermophilus_dauricus.KZ294078.1                         1950063 28 -   3870691 cctacaga--aggtataga-ag---ctccc--------tt-cg
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             28485  3 +     97271 ---------------------------------------a-ca
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 4 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              16046  3 -    196729 ---------------------------------------a-ct
i Suricata_suricatta.SurSur_flattened_line_6629          I 4 C 0
s Sus_scrofa.JH118708.1                                      32950  3 -     47482 ---------------------------------------g-ca
i Sus_scrofa.JH118708.1                                  I 3 C 0
s Symphalangus_syndactylus.tarseq_199                      1090098 26 -   1523678 cagggagc--atgt--ggg-ag---cccca--------tg-ca
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 8420  3 +     41958 ---------------------------------------g-ca
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 3 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      116489  4 -    156842 ---------------------------------------tgca
i Tapirus_indicus.TapInd_scaffold_9301                   I 3 I 2
s Tapirus_terrestris.TapTer_scaffold_755                    384938  4 +    539355 ---------------------------------------tgca
i Tapirus_terrestris.TapTer_scaffold_755                 I 3 I 2
s Tarsius_lariang.k141_2201908                               12413 26 +     70052 cagagagg--gcat--ggc-aa---tccca--------tg-ca
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               16718 26 +     25099 cagagagg--gcat--ggc-aa---tccca--------tg-ca
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186425218 26 + 186847797 cagggaGT--GTGT--GGG-AG---CCCCA--------GG-CA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          7623 26 -     20410 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    11818 26 +     15221 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        7724 26 +     19930 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       4154 26 -     19997 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            44274 26 -     60166 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        11745 26 -     27529 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     11687 26 -     18194 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           5421 26 -     21137 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    4124 26 -     10723 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         3276 26 +      9834 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        21591 26 +     32220 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5935691 26 +   6242583 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        4939 26 +     20839 cagggagt--gtgt--ggg-ag---cccca--------gg-ca
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2152179 17 +   4065304 -------------tatgga-gt---ctcca--------tg-cc
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     5492 17 -     10553 -------------tatgga-gt---ctcca--------tg-cc
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4848203  3 -   5085361 ---------------------------------------a-ca
i Ursus_maritimus.KK499267.1                             I 4 C 0
s Varecia_rubra.k141_590885                                   8712 27 +     50397 caggcagc--aggc--acgcag---ctgca--------tg-ca
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              8767 27 +     24756 caggcagc--aggc--acgcag---ctgca--------tg-ca
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  8656  3 -     43706 ---------------------------------------a-ca
i Vulpes_lagopus.VulLag_flattened_line_30954             I 4 C 0
s Vicugna_pacos.KN270157.1                                 5369645  2 -   5488506 tc-----------------------------------------
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        21442 28 -     24430 cctgcaga--aggtataga-ag---ttccc--------tt-cg
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          2895  3 +     86975 ---------------------------------------a-ca
i Zalophus_californianus.ZalCal_flattened_line_17732     I 4 C 0
e Otolemur_garnettii.GL873799.1                             692983 10 -   1103335 I
e Otolemur_crassicaudatus.k141_222918                          816 10 +      8798 I
e Galago_senegalensis.k141_631886                              981 10 +     11339 I
e Galago_moholi.ctg2040                                     423274 10 -    453645 I
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519  0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188  0 +      1777 C
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Mus_pahari.LT608297.1                                   31351706  0 -  89631738 C
e Mus_spretus.CM004101.1                                  90749500  0 - 130317789 C
e Mus_musculus.chr8                                       87647421  0 - 129401213 C
e Mus_caroli.LT608237.1                                   84358433  0 - 120012414 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Loris_tardigradus.ctg83                                  1001514 10 +   6120653 I
e Loris_lydekkerianus.k141_2539221                            2677 10 +     11245 I
e Perodicticus_potto.k141_1092580                             5058 10 +     25941 I
e Perodicticus_ibeanus.k141_855320                            6685 10 +     13100 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      11935  1 +     63895 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383  9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   2809  0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 70244  0 +    116680 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    10676  0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                85637 14 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rattus_norvegicus.chr16                                 53567515  0 +  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Pteropus_vampyrus.KN525825.1                             1357734 14 +   4952924 I
e Pteropus_alecto.KB030862.1                              22974644 14 +  28871421 I
e Psammomys_obesus.NESX01036370.1                             6982  0 -     21651 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18191253  0 -  18517816 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Oryctolagus_cuniculus.CM000791.1                        67144574 44 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    76654  0 +    102263 C
e Ondatra_zibethicus.OndZib_scaffold_46174                   21202  0 +     28053 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1360483  0 +   3988456 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105746918 10 + 199412804 I
e Nycticebus_coucang.k141_5327727                             4177 10 +      8486 I
e Nycticebus_bengalensis.LG01                            102576491 10 - 196305487 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186890  0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11257107  0 -  27267610 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12179856  0 -  29670104 C
e Meriones_unguiculatus.MerUng_scaffold_7390                 29331  0 +    140813 C
e Megaderma_lyra.MegLyr_scaffold_4542                         8178  0 -    207569 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 88455  4 +     94391 I
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3730 44 -     14121 I
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8272963  1 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_29171               41045  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       109621  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Galagoides_demidoff.k141_1959596                            4781 10 +      6795 I
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Ellobius_talpinus.LOJH01109367.1                            3007  0 -      6299 C
e Ellobius_lutescens.LOEQ01008920.1                          16953  0 -    110024 C
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Eidolon_helvum.KE759718.1                                   8374  9 +     11740 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            61949  0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Crocidura_indochinensis.CroInd_scaffold_287352              1624  0 +      4208 I
e Cricetulus_griseus.LT883664.1                           11664758  8 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 47433  0 +     63868 C
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          11837  0 -     20389 C
e Condylura_cristata.JH655891.1                           17547132  5 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            171068  0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15969  0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            5641  0 -      6351 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Arctocebus_calabarensis.k141_288239                        16452 10 +     17124 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     66596  1 -     89534 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     67723  0 +     87051 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       3415 18 +     62944 CA--CACA--T-----------------T-c-c----cc----tgatcc
s Acinonyx_jubatus.LLWD01001279.1                           825050 17 -   1699592 tg--a-----c-----------------c-c-c--catt----tcacac
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9508300 17 -  29979442 ta--t-----c-----------------a-c-c--caac----acacac
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             77075 17 -    347723 ta--t-----c-----------------c-c-c--caac----acacac
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   11345 17 -     52922 ca--ctca--t-----------------g-c-c----gc----a-gtcc
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         11279 17 -     28001 ca--caca--t-----------------g-c-c----gc----a-gtcc
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          1725 17 -     18505 ca--caca--t-----------------g-c-c----gc----a-gtcc
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           2574 17 -     12518 ca--caca--t-----------------g-c-c----gc----a-gtcc
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                               179 18 -     27731 cg--caca--c-----------------a-c-c----cc----gagtcc
i Alouatta_belzebul.k141_3238538                         N 0 C 0
s Alouatta_caraya.k141_885645                                54455 18 +     54689 CG--CACA--C-----------------A-C-C----CC----GAGTCC
i Alouatta_caraya.k141_885645                            C 0 N 0
s Alouatta_discolor.k141_743489                                440 18 -     45847 cg--caca--c-----------------a-c-c----cc----gagtcc
i Alouatta_discolor.k141_743489                          N 0 C 0
s Alouatta_juara.k141_1509701                                21644 18 +     25266 cg--caca--c-----------------a-c-c----cc----gagtcc
i Alouatta_juara.k141_1509701                            I 258 C 0
s Alouatta_macconnelli.k141_1406484                            828 18 +      2906 cg--caca--c-----------------a-c-c----cc----gagtcc
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            14941 18 -     18578 cg--caca--c-----------------a-c-c----cc----gagtcc
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                               331 18 +     47717 cg--caca--c-----------------a-c-c----cc----gagtcc
i Alouatta_palliata.k141_2135620                         N 0 C 0
s Alouatta_puruensis.k141_1253230                              459 18 -      3544 cg--caca--c-----------------a-c-c----cc----gagtcc
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             11678 18 +     50774 cg--caca--c-----------------a-c-c----cc----gagtcc
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  12310 18 -     33861 ca--caca--c-----------------a-c-g----cc----gagtcc
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            12331 18 -     34016 ca--caca--c-----------------a-c-g----cc----gagtcc
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4294726 18 -   5030052 ca--caca--c-----------------a-c-g----cc----gAGTCC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             12332 18 -     34685 ca--caca--c-----------------a-c-g----cc----gagtcc
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               25453 18 -     47192 ca--caca--c-----------------a-c-g----cc----gagtcc
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       8956 21 +     20879 ta--caaa--t-----------------c-c-ctgc-tc----caaatc
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Avahi_laniger.k141_765380                                  50990 17 -     92717 ct--caca--c-----------------a-c-g----ct-----gacac
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              51619 17 +     85213 ct--caca--c-----------------a-c-g----ct-----gacac
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             2075 18 -     10423 cg--caca--c-----------------a-c-c----ct----gagtcc
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             21562 18 +     31915 ca--cacg--c-----------------a-c-c----cc----gagtcc
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            2042 18 +      5267 cg--caca--c-----------------a-c-c----ct----gagtcc
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23587254 18 - 189096842 CG--CACA--C-----------------A-C-C----CT----GAGTCC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              8786 18 -     12001 cg--caca--c-----------------a-c-c----ct----gagtcc
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10000147  9 -  17673402 --------------------------------c----tc----ccatac
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2332611  9 -   7040546 --------------------------------c----tc----ccatac
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  400887  9 -   1652518 --------------------------------c----tc----ccatac
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17797039 15 -  60362399 ca--t-----c-----------------c-c-c----at----acacac
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    183096 15 -    185531 ca--t-----c-----------------c-c-c----at----acacac
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9032482 15 -   9314153 ca--t-----c-----------------c-c-c----at----acacac
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17956747 15 -  59632846 ca--t-----c-----------------c-c-c----at----acacac
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18498047 15 +  63665305 ca--t-----c-----------------c-c-c----at----acacac
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           142801 19 -    496798 CA--CAAA--T-----------------A-CTC----CC----TAATAC
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    135424  8 +    179628 -------------------------------------ac----caatac
i Castor_canadensis.CasCan_scaffold_2074                 I 2 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     90446 32 +    217609 ta--c-----ctggagagggcatggaagc-t-c----ac----ccatac
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          6695 18 -     11392 cg--caca--c-----------------a-c-c----ct----gagtcc
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               2793 18 -      7577 cg--caca--c-----------------a-c-c----ct----gagtcc
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         6710 19 -      8605 ca--caaa--t-----------------a-ctc----cc----taatac
i Cephalopachus_bancanus.k141_2037105                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12229158 16 +  27778364 ca--c-----a-----------------cac-c----cc----caaccc
i Ceratotherium_simum.JH767749.1                         I 2 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634            185 16 -     25243 ca--c-----a-----------------cac-c----cc----caaccc
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 2 C 0
s Cercocebus_atys.KQ010504.1                               4472305 17 +   4669795 CA--CACA--T-----------------G-C-C----GC----A-GTCC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        10852 17 -     19203 ca--caca--t-----------------g-c-c----gc----a-gtcc
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           5274 17 +      8260 ca--caca--t-----------------g-c-c----gc----a-gtcc
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           5501 17 +     27781 ca--caca--t-----------------g-c-c----gc----a-gtcc
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         5656 17 -     20310 ca--caca--t-----------------g-c-c----gc----a-gtcc
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           8640 17 +     29689 ca--caca--t-----------------g-c-c----gc----a-gtcc
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            3068 17 +      9989 ca--caca--t-----------------a-c-c----gc----a-gtcc
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          11317 17 -     27936 ca--caca--t-----------------g-c-c----gc----a-gtcc
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                             199 17 -     17152 ca--caca--t-----------------a-c-c----gc----a-gtcc
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38813722 17 +  39242232 ca--caca--t-----------------g-c-c----gc----a-gtcc
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21219418 17 -  21565898 ca--caca--t-----------------a-c-c----gc----a-gtcc
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       36537 17 -     53127 ca--caca--t-----------------a-c-c----gc----a-gtcc
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        3823 17 +      7159 ca--caca--t-----------------g-c-c----gc----a-gtcc
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       11340 17 -     27947 ca--caca--t-----------------a-c-c----gc----a-gtcc
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         11313 17 +     17596 ca--caca--t-----------------a-c-c----gc----a-gtcc
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                           538 17 +     26000 ca--caca--t-----------------a-c-c----gc----a-gtcc
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             18416 18 -     52598 cc--caca--c-----------------acc-c----cc-----gacac
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           13765 19 +     57038 cc--caca--c---------c------cc-c-c----cc-----gacac
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           7706 18 +     11226 cg--caca--g-----------------a-c-c----cc----gagtcc
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18425278 17 -  18827391 ca--caca--t-----------------a-c-c----gc----a-gtcc
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       11719 17 -     50209 ca--caca--t-----------------a-c-c----gc----a-gtcc
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135418725 17 + 135778131 CA--CACA--T-----------------A-C-C----GC----A-GTCC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1907239 17 +   2368649 ca--caca--c-----------------a-c-c----gC----A-GTCC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199946911 17 + 200372422 ca--caca--c-----------------a-c-t----gc----a-gtcc
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              33783 17 +     84244 ca--caca--c-----------------a-c-c----gc----a-gtcc
i Colobus_polykomos.k141_906115                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             26219 17 -     87169 ca--c-----c-----------------c-c-c--atat----atacat
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    834499 15 +   1526836 ----------------------------c-c-ctgcctc----caatac
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 2 C 0
s Daubentonia_madagascariensis.ctg71                      12534587 18 -  12879189 cc--caca--c-----------------a-c-c----cc----caacac
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  671010 16 +   1390856 ca--c-----a-----------------cac-c----cc----caaccc
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 2 I 3
s Diceros_bicornis.DicBicMic_scaffold_5955                    3766 16 +    198055 ca--c-----a-----------------cac-c----cc----caaccc
i Diceros_bicornis.DicBicMic_scaffold_5955               I 2 C 0
s Enhydra_lutris.KZ291758.1                               16327054 17 -  41312741 ta--t-----c-----------------c-c-ct--aac----acacac
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1281059 15 +   4378816 ca--c-----a-----------------c-c-c----cc----caacat
i Equus_asinus.JREZ01000139.1                            I 2 C 0
s Equus_caballus.CM000403.2                               18528879 15 -  39960074 ca--c-----a-----------------c-c-c----cc----caacat
i Equus_caballus.CM000403.2                              I 2 C 0
s Equus_przewalskii.KK951119.1                               30894 15 +    498745 ca--c-----a-----------------c-c-c----cc----caacat
i Equus_przewalskii.KK951119.1                           I 2 C 0
s Erythrocebus_patas.Contig38                             21201920 17 -  21539334 ca--caca--t-----------------a-c-c----gc----a-gtcc
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              11101 17 -     14127 cc--caca--c-----------------a-c-c----ct-----gacac
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                3799 17 -     16928 cc--caca--c-----------------a-c-c----ct-----gacac
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              12832 17 -     25546 cc--caca--c-----------------a-c-c----cc-----gacac
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            10017 17 +     26330 cc--caca--c-----------------a-c-c----cc-----gacac
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 11265 17 +     23973 cc--caca--c-----------------a-c-c----ct-----gacac
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                10017 17 +     75513 cc--caca--c-----------------a-c-c----cc-----gacac
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  7968 17 +     97555 cc--caca--c-----------------a-c-c----ct-----gacac
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            10896 17 +     26496 cc--cata--c-----------------a-c-c----cc-----cacac
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  1501 17 -     17153 cc--caca--c-----------------a-c-c----ct-----gacac
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              11077 17 +    111500 cc--caca--c-----------------a-c-c----ct-----gacac
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20234916 17 + 206538554 tg--a-----c-----------------c-c-c--catt----tcacac
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20193760 17 + 205367284 tg--a-----c-----------------c-c-c--catt----tcacac
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  7272 17 -     36744 tg--a-----c-----------------c-c-c--catt----tcacac
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_266699               1566 18 +      2098 ca--caca--t-----------------a-c-c----cc----aaatac
i Galeopterus_variegatus.GalVar_scaffold_266699          C 0 C 0
s Gorilla_beringei.k141_3596273                              12649 18 -     32273 ca--caca--t-----------------t-c-c----cc----tgatcc
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186334797 18 + 186649187 ca--caca--t-----------------t-c-c----cc----tgatcc
i Gorilla_gorilla.LT578341.1                             I 26 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   31873  8 +     78134 -------------------------------------tc----cagtac
i Graphiurus_murinus.GraMur_scaffold_10447               I 7 C 0
s Hapalemur_alaotrensis.k141_170648                           4158 17 -     19426 cc--caca--c-----------------a-c-c----cc-----gacac
i Hapalemur_alaotrensis.k141_170648                      C 0 I 16
s Hapalemur_gilberti.k141_488810                              9302 17 -     15286 cc--caca--c-----------------a-c-c----cc-----gacac
i Hapalemur_gilberti.k141_488810                         C 0 I 16
s Hapalemur_griseus.k141_1511508                             10940 17 +     18253 cc--caca--c-----------------a-c-c----cc-----gacac
i Hapalemur_griseus.k141_1511508                         C 0 I 16
s Hapalemur_meridionalis.k141_248335                         11043 17 -     41752 cc--caca--c-----------------a-c-c----cc-----gatac
i Hapalemur_meridionalis.k141_248335                     C 0 I 16
s Hapalemur_occidentalis.k141_907772                         10876 17 -     16460 cc--caca--c-----------------a-c-c----cc-----gacac
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               240052 17 +    327341 ca--c-----c-----------------c-c-c--atac----acacac
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hoolock_leuconedys.ctg274                                    431492 18 +    630532 ta--caca--t-----------------a-c-c----cc----taatcc
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  42200 17 +     55795 ca--c-----c-----------------c-c-c--atac----acgtat
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_307679                               14426 18 -     15490 ta--caca--t-----------------a-c-c----cc----taatcc
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              56432 18 +     67168 ta--caca--t-----------------a-c-c----cc----taatcc
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189540082 18 - 191637585 ta--caca--t-----------------a-c-c----cc----taatcc
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3332975 18 -  11177569 ta--caca--t-----------------a-c-c----cc----taatcc
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7517007 21 -   7955117 ta--caaa--t-----------------c-c-ctgc-tc----caacac
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   19848 17 +     31101 cc--cata--c-----------------a-c-c----cc-----gacac
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15521405 17 -  30322482 cc--caca--c-----------------a-c-c----cc-----gacac
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        4476 18 +     64341 cg--catg--c-----------------a-c-c----cc----aagtcc
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           1536 18 +      4941 cg--catg--c-----------------a-c-c----cc----aagtcc
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4404 18 +     35603 cg--catg--c-----------------a-c-c----cc----aagtcc
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    25832 18 +     38576 tg--caca--c-----------------a-c-c----cc----aagtcc
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         22529 18 +     66356 tg--caca--c-----------------a-c-c----cc----aagtcc
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          8299 17 -     23766 cc--caca--c-----------------a-c-c----cc-----aacac
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             26246 17 +     45836 tc--caca--c-----------------a-c-c----cc-----aacac
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_320948                           529 17 -      1719 tc--caca--c-----------------a-c-c----cc-----aacac
i Lepilemur_ruficaudatus.k141_320948                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      24301 17 +     54090 tc--caca--t-----------------a-c-c----cc-----aacac
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3040199  6 +   3914936 -------------------------------------------acacac
i Leptonychotes_weddellii.KB714746.1                     I 11 C 0
s Lophocebus_aterrimus.ctg367                              1433850 17 +   1826925 ca--caca--t-----------------g-c-t----gc----a-gtcc
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17952987 15 -  59628241 ca--t-----c-----------------c-c-c----at----acacac
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               3671 17 +     40492 ca--caca--t-----------------g-c-c----gc----a-gtcc
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59672925 17 +  60120075 ca--caca--t-----------------g-c-c----gc----a-gtcc
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  9427 17 -     26193 ca--caca--t-----------------g-c-c----gc----a-gtcc
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            77223 17 -    114318 ca--caca--t-----------------g-c-c----ac----a-gtcc
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  2938 17 -     23192 ca--caca--t-----------------g-c-c----ac----a-gtcc
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                12390 17 -     29190 ca--caca--t-----------------g-c-c----gc----a-gtcc
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  20958 17 +     37952 ca--caca--t-----------------g-c-c----gc----a-gtcc
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186836046 17 + 187317192 CA--CACA--T-----------------G-C-C----GC----A-GTCC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25454609 17 -  25927173 CA--CACA--T-----------------G-C-C----GC----A-GTCC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  76807 17 +     89720 ca--caca--t-----------------g-c-t----gc----a-gtcc
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 3804 17 +     20474 ca--caca--t-----------------g-c-c----gc----a-gtcc
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   3606 17 -     14993 ca--caca--t-----------------g-c-c----gc----a-gtcc
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  326476 17 -    668171 ca--caca--t-----------------g-c-c----gc----a-gtcc
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 1908 17 -     24072 ca--caca--t-----------------g-c-c----gc----a-gtcc
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               22545 17 -     45290 ca--caca--t-----------------g-c-c----gc----a-gtcc
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23934093 17 -  24302211 ca--caca--t-----------------g-c-c----ac----a-gtcc
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               348269 17 +    752769 ca--caca--t-----------------g-c-c----ac----a-gtcc
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              17206 18 +    737560 c---c-----c-----------------c-a-c----tcctcacaatac
i Manis_javanica.JSZB01003497.1                          I 3 C 0
s Manis_pentadactyla.KN006162.1                              48591 18 -    317179 c---c-----c-----------------c-a-c----tcctcacaatac
i Manis_pentadactyla.KN006162.1                          I 3 C 0
s Marmota_marmota.CZRN01000018.1                          33099319 21 -  40650429 aa--caaa--t-----------------c-c-ctgc-tc----caacac
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              7762 17 +     13704 ta--t-----c-----------------c-c-ct--aac----acacac
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mico_argentatus.k141_1239457                                2621 18 -      7380 cg--caca--c-----------------a-c-c----ct----gagtcc
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               1691 18 +     18990 cg--caca--c-----------------a-c-c----ct----gagtcc
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      2626 18 -      7356 cg--caca--c-----------------a-c-c----ct----gagtct
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18288791 17 -  93316391 CC--CACA--C-----------------A-C-C----CC-----GACAC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_534055                           5846 17 -     28506 ca--caca--t-----------------g-c-c----gc----a-gtcc
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         3036  6 -      8324 -------------------------------------------acacac
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 11 C 0
s Mirza_zaza.k141_952172                                      6361 17 -     37649 cc--caca--c-----------------a-c-c----cc-----gacac
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 139052 15 -    366855 ca--c-----c-----------------c-g-c----tt----ccatac
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   33155 17 +     37127 ca--c-----c-----------------c-c-c--atac----acacac
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              4127  8 +     14296 -------------------------------------cc----cagaac
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 2 C 0
s Mustela_putorius.JH418006.1                               298943 17 -  14710649 ta--t-----c-----------------t-c-ct--aac----acacac
i Mustela_putorius.JH418006.1                            C 0 C 0
s Nasalis_larvatus.k141_413338                               11841 17 +     21681 ca--caca--t-----------------a-c-c----ac----a-gtcc
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    757640 15 +    783361 cc--c-----c-----------------c-g-c----tc----ccctac
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9147247 15 -   9404916 ca--t-----c-----------------c-c-c----at----acacac
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Odobenus_rosmarus.KB229312.1                              504331 17 -   2017862 ta--t-----c-----------------c-c-c--caac----acacac
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       460002 15 -    559221 ca--t-----c-----------------c-g-c----at----acacac
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Pan_paniscus.KQ411613.1                                    40767 18 +     80009 CA--CACA--T-----------------T-C-C----CC----TGATCC
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189139659 18 + 189151597 CA--CACA--T-----------------T-C-C----CC----TGATCC
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  148924 17 +    230217 tg--a-----c-----------------c-c-c--catt----tcacac
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                262131 17 +  18783137 tg--a-----c-----------------c-c-c--catt----tcacac
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4718767 17 -   8748460 tg--a-----c-----------------c-c-c--catt----tcacac
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183439879 17 + 183742232 CA--CACA--T-----------------G-C-T----GC----A-GTCC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             3572 17 +     20448 ca--caca--t-----------------g-c-t----gc----a-gtcc
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20560377 17 +  20919399 ca--caca--t-----------------g-c-t----gc----a-gtcc
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   2315 17 +     41871 ca--caca--t-----------------g-c-t----gc----a-gtcc
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     5601 17 +     27711 ca--caca--t-----------------g-c-t----gc----a-gtcc
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  5680 17 +      9205 ca--caca--t-----------------g-c-t----gc----a-gtcc
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10385 17 -     78924 ca--c-----c-----------------c-c-c--atac----acacat
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Piliocolobus_badius.k141_1234363                           40355 17 +     62158 ca--caca--t-----------------a-c-c----ac----a-gtcc
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        35077 17 +     89929 ca--caca--t-----------------a-c-c----ac----a-gtcc
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            36493 17 +     51399 ca--caca--t-----------------a-c-c----ac----a-gtcc
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14292731 17 -  14605196 CA--CACA--T-----------------A-C-C----AC----A-GTCC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189127801 18 + 189387572 TA--CACA--T-----------------A-C-C----CC----TAATCc
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9567409 18 +   9816681 ta--caca--t-----------------a-c-c----cc----taatcc
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               70005 17 -     81375 ca--caca--t-----------------a-c-c----ac----a-gtcc
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              1825 17 +     19060 ca--caca--t-----------------a-c-c----ac----a-gtcc
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2594056 17 -   4620579 CC--CACA--C-----------------A-C-T----CC-----AACAC
i Prolemur_simus.MPIZ01000396.1                          C 0 I 28
s Propithecus_coquerelli.NW_012148875.1                     988046 17 +   2598838 CC--CACA--C-----------------A-C-C----CC-----GACAC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          26357 17 +     38485 cc--caca--c-----------------a-c-c----cc-----gacac
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             2516 17 +      4256 cc--caca--c-----------------a-c-c----cc-----gacac
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          23876 17 +     35766 cc--caca--c-----------------a-c-t----cc-----gacac
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           2058 17 -     24134 cc--caca--c-----------------a-c-c----cc-----gacac
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        25871 17 -     67325 cc--caca--c-----------------a-c-c----cc-----gacac
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           2109 17 -      6182 cc--caca--c-----------------a-c-c----cc-----gacac
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            12447 15 -     21811 ca--c-----c-----------------c-c-c----ct----ccctac
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         37961 17 +     42204 ta--t-----c-----------------c-c-ct--aac----acacac
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Puma_concolor.QAVW01001104.1                            20272046 17 -  38429054 tg--a-----c-----------------c-c-c--catt----tcacac
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             11837 17 -     91421 ca--caca--t-----------------a-c-c----ac----a-gtcc
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7605965 17 +   7812017 ca--caca--t-----------------a-c-c----ac----a-gtcc
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11813 17 -     72585 ca--caca--t-----------------a-c-c----ac----a-gtcc
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             3520 17 -     11128 ca--caca--t-----------------a-c-c----ac----a-gtcc
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91232875 17 - 195417433 CA--CACA--T-----------------A-C-C----AC----A-GTCC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7668524 17 +   7961872 ca--caca--t-----------------a-c-c----ac----a-gtcc
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_2619299                               4731 18 -      8359 cg--caca--g-----------------a-c-c----cc----gagtcc
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            11040 18 -     13588 cg--cacg--c-----------------a-c-c----cc----aagtcc
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              4677 18 -      6207 cg--caca--g-----------------a-c-c----cc----gagtcc
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               10404 18 +     13640 cg--caca--g-----------------a-c-c----cc----gagtcc
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               5267 18 +      8564 cg--caca--g-----------------a-c-c----cc----gagtcc
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209465544 18 + 209938924 cg--caca--g-----------------a-c-c----cc----gagtcc
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 4757 18 -      9399 cg--caca--g-----------------a-c-c----cc----gagtcc
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 1905 18 +      3421 cg--cacg--c-----------------a-c-c----cc----aagtcc
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119948089 18 - 121099817 CT--CACA--C-----------------A-C-C----CC----AAGTCC
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       20556 18 +     46362 ct--caca--c-----------------a-c-c----cc----gagtcc
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               20651 18 +     45824 ct--caca--c-----------------a-c-c----cc----gagtcc
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             37266 18 -     64574 ct--caca--c-----------------a-c-c----cc----gagtcc
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                                272 18 -     23631 ct--caca--c-----------------a-c-c----cc----aagtcc
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 20544 18 -     61129 ct--caca--c-----------------a-c-c----cc----gagtcc
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          16348 17 -     19888 ca--caca--t-----------------a-c-c----ac----a-gtcc
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      23550 17 +     39453 ca--caca--t-----------------a-c-c----ac----a-gtcc
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            4076 17 +     27826 ca--caca--t-----------------a-c-c----ac----a-gtcc
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             3597 17 -     19483 ca--caca--t-----------------a-c-c----ac----a-gtcc
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      3659 17 +      7198 ca--caca--t-----------------a-c-c----ac----a-gtcc
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         11919 17 +     15514 ca--caca--t-----------------a-c-c----ac----a-gtcc
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            188963 15 -    191337 CT--C-----T-----------------A-C-C----AC----CCAGAG
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1950091 21 -   3870691 ta--taaa--t-----------------c-c-ctgc-tc----caacac
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             28488 17 +     97271 ta--t-----c-----------------c-c-c--caac----atgcac
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              16049 17 -    196729 ca--c-----c-----------------c-c-c--atac----acacac
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.JH118708.1                                      32953 32 -     47482 tt--c-----ctggagagagcatggaagc-g-c----tc----ctatac
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1090124 18 -   1523678 ta--caca--t-----------------a-c-c----cc----taatcc
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 8423 17 +     41958 ca--g---cgc-----------------c-c-c----tc----tcatcc
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      116495 16 -    156842 ca--c-----a-----------------cac-c----cc----caacac
i Tapirus_indicus.TapInd_scaffold_9301                   I 2 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    384944 18 +    539355 cacac-----a-----------------cac-c----cc----caacac
i Tapirus_terrestris.TapTer_scaffold_755                 I 2 C 0
s Tarsius_lariang.k141_2201908                               12439 19 +     70052 ca--caaa--t-----------------a-ctc----cc----taatac
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_780063                               16744 19 +     25099 ca--caaa--t-----------------a-ctc----cc----taatac
i Tarsius_wallacei.k141_780063                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186425244 17 + 186847797 CA--CACA--T-----------------G-C-T----GC----A-GTCC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          7649 17 -     20410 ca--caca--t-----------------a-c-c----ac----a-gtcc
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    11844 17 +     15221 ca--caca--t-----------------a-c-c----ac----a-gtcc
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        7750 17 +     19930 ca--caca--t-----------------a-c-c----ac----a-gtcc
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       4180 17 -     19997 ca--caca--t-----------------a-c-c----ac----a-gtcc
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            44300 17 -     60166 ca--caca--t-----------------a-c-c----ac----a-gtcc
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        11771 17 -     27529 ca--caca--t-----------------a-c-c----ac----a-gtcc
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     11713 17 -     18194 ca--caca--t-----------------a-c-c----ac----a-gtcc
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           5447 17 -     21137 ca--caca--t-----------------a-c-c----ac----a-gtcc
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    4150 17 -     10723 ca--caca--t-----------------a-c-c----ac----a-gtcc
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         3302 17 +      9834 ca--caca--t-----------------a-c-c----ac----a-gtcc
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        21617 17 +     32220 ca--caca--t-----------------a-c-c----ac----a-gtcc
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5935717 17 +   6242583 ca--caca--t-----------------a-c-c----ac----a-gtcc
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        4965 17 +     20839 ca--caca--t-----------------a-c-c----ac----a-gtcc
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2152196 14 +   4065304 c---taca--t-----------------c-c-c----c-------agac
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     5509 14 -     10553 t---taca--c-----------------c-c-c----c-------agac
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4848206 17 -   5085361 ta--t-----c-----------------c-c-c--caat----acacac
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   8739 17 +     50397 tc--caca--c-----------------a-c-c----cc-----gacac
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              8794 17 +     24756 cc--caca--c-----------------a-c-c----cc-----aacac
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5369647  9 -   5488506 --------------------------------c----tc----ccatac
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  8659 15 -     43706 ca--t-----c-----------------c-c-c----at----acacac
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        21470 21 -     24430 ta--caaa--t-----------------c-c-ctgc-tc----caacac
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          2898  6 +     86975 -------------------------------------------acacac
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Otolemur_garnettii.GL873799.1                             692983 10 -   1103335 I
e Otolemur_crassicaudatus.k141_222918                          816 10 +      8798 I
e Galago_senegalensis.k141_631886                              981 10 +     11339 I
e Galago_moholi.ctg2040                                     423274 10 -    453645 I
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519  0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188  0 +      1777 C
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Mus_pahari.LT608297.1                                   31351706  0 -  89631738 C
e Mus_spretus.CM004101.1                                  90749500  0 - 130317789 C
e Mus_musculus.chr8                                       87647421  0 - 129401213 C
e Mus_caroli.LT608237.1                                   84358433  0 - 120012414 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Loris_tardigradus.ctg83                                  1001514 10 +   6120653 I
e Loris_lydekkerianus.k141_2539221                            2677 10 +     11245 I
e Perodicticus_potto.k141_1092580                             5058 10 +     25941 I
e Perodicticus_ibeanus.k141_855320                            6685 10 +     13100 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      11935  1 +     63895 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383  9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   2809  0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 70244  0 +    116680 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    10676  0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                85637 14 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rattus_norvegicus.chr16                                 53567515  0 +  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Pteropus_vampyrus.KN525825.1                             1357734 14 +   4952924 I
e Pteropus_alecto.KB030862.1                              22974644 14 +  28871421 I
e Psammomys_obesus.NESX01036370.1                             6982  0 -     21651 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18191253  0 -  18517816 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Oryctolagus_cuniculus.CM000791.1                        67144574 44 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    76654  0 +    102263 C
e Ondatra_zibethicus.OndZib_scaffold_46174                   21202  0 +     28053 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1360483  0 +   3988456 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105746918 10 + 199412804 I
e Nycticebus_coucang.k141_5327727                             4177 10 +      8486 I
e Nycticebus_bengalensis.LG01                            102576491 10 - 196305487 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186890  0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11257107  0 -  27267610 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12179856  0 -  29670104 C
e Meriones_unguiculatus.MerUng_scaffold_7390                 29331  0 +    140813 C
e Megaderma_lyra.MegLyr_scaffold_4542                         8178  0 -    207569 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 88455  4 +     94391 I
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3730 44 -     14121 I
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8272963  1 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_29171               41045  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       109621  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Galagoides_demidoff.k141_1959596                            4781 10 +      6795 I
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Ellobius_talpinus.LOJH01109367.1                            3007  0 -      6299 C
e Ellobius_lutescens.LOEQ01008920.1                          16953  0 -    110024 C
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Eidolon_helvum.KE759718.1                                   8374  9 +     11740 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            61949  0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Crocidura_indochinensis.CroInd_scaffold_287352              1624  0 +      4208 I
e Cricetulus_griseus.LT883664.1                           11664758  8 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 47433  0 +     63868 C
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          11837  0 -     20389 C
e Condylura_cristata.JH655891.1                           17547132  5 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            171068  0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15969  0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            5641  0 -      6351 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Arctocebus_calabarensis.k141_288239                        16452 10 +     17124 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     66596  1 -     89534 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     67723  0 +     87051 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       3433 11 +     62944 ctta-ccct----gtg
s Acinonyx_jubatus.LLWD01001279.1                           825067  9 -   1699592 gttg-tcca----a--
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 23
s Ailuropoda_melanoleuca.LNAT01000098.1                    9508317  9 -  29979442 cttg-ccca----a--
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 23
s Ailurus_fulgens.LNAC01001112.1                             77092  9 -    347723 ctta-ccca----a--
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 23
s Allenopithecus_nigroviridis.k141_3361533                   11362 11 -     52922 cctg-ccct----gtg
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         11296 11 -     28001 catg-ccct----gtg
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          1742 11 -     18505 cctg-ccct----gtg
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           2591 11 -     12518 cctg-ccct----gtg
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                               197  9 -     27731 ctg---cct----gtg
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                 325  4 +      3134 --------t----gtg
i Alouatta_caraya.k141_1743867                           N 0 C 0
s Alouatta_discolor.k141_743489                                458  9 -     45847 ctg---cct----gtg
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                21662  9 +     25266 ctg---cct----gtg
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                            846  9 +      2906 ctg---cct----gtg
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            14959  9 -     18578 ctg---cct----gtg
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                               349  9 +     47717 ctg---cct----gtg
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                              477  9 -      3544 ctg---cct----gcg
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             11696  9 +     50774 ctg---cct----gtg
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  12328  9 -     33861 ctg---cct----gtg
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            12349  9 -     34016 ctg---cct----gtg
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4294744  9 -   5030052 CTG---CCT----GTG
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             12350  9 -     34685 ctg---cct----gtg
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               25471  9 -     47192 ctg---cct----gtg
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       8977 10 +     20879 ctg--tcct----atg
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Avahi_laniger.k141_765380                                  51007 11 -     92717 agtg-ccat----gtg
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              51636 11 +     85213 agtg-ccat----gtg
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             2093  9 -     10423 ctg---cct----gtc
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             21580  9 +     31915 ctg---ccc----atg
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            2060  9 +      5267 ctg---cct----gtg
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23587272  9 - 189096842 CTG---CCT----GTG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              8804  9 -     12001 ctg---cct----gtg
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10000156  9 -  17673402 cctg-ctca----a--
i Camelus_bactrianus.KN276810.1                          C 0 I 27
s Camelus_dromedarius.KN272107.1                           2332620  9 -   7040546 cctg-ctca----a--
i Camelus_dromedarius.KN272107.1                         C 0 I 27
s Camelus_ferus.KB017975.1                                  400896  9 -   1652518 cctg-ctca----a--
i Camelus_ferus.KB017975.1                               C 0 I 27
s CanFam4.chr16                                           17797054  9 -  60362399 cttg-cccg----a--
i CanFam4.chr16                                          C 0 I 23
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    183111  9 -    185531 cttg-cccg----a--
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 I 23
s Canis_lupus_dingo.QKWQ01000480.1                         9032497  9 -   9314153 cttg-cccg----a--
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 23
s Canis_lupus_familiaris.chr16                            17956762  9 -  59632846 cttg-cccg----a--
i Canis_lupus_familiaris.chr16                           C 0 I 23
s Canis_lupus_orion.HG994398.1                            18498062  9 +  63665305 cttg-cccg----a--
i Canis_lupus_orion.HG994398.1                           C 0 I 23
s Carlito_syrichta.NW_007259797.1                           142820 11 -    496798 TTTA-CCCT----ATg
i Carlito_syrichta.NW_007259797.1                        C 0 I 5359
s Castor_canadensis.CasCan_scaffold_2074                    135432 11 +    179628 cttc-ccca----atg
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     90478  9 +    217609 tttg-ccca----a--
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 27
s Cebuella_niveiventris.k141_1251222                          6713  9 -     11392 ctg---cct----gtg
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               2811  9 -      7577 ctg---cct----gtg
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_2037105                         6729 11 -      8605 ttta-cctt----atg
i Cephalopachus_bancanus.k141_2037105                    C 0 N 0
s Ceratotherium_simum.JH767749.1                          12229174  3 +  27778364 cct-------------
i Ceratotherium_simum.JH767749.1                         C 0 I 27
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634            201  3 -     25243 cct-------------
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 I 27
s Cercocebus_atys.KQ010504.1                               4472322 11 +   4669795 CCTG-CCCT----GTG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        10869 11 -     19203 cctg-ccct----gtg
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           5291 11 +      8260 cctg-ccct----gtg
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           5518 11 +     27781 cctg-ccct----gtg
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         5673 11 -     20310 cctg-ccct----gtg
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           8657 11 +     29689 cctg-ccct----gtg
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            3085 11 +      9989 cctg-ccct----gtg
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          11334 11 -     27936 cctg-ccct----gtg
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                             216  1 -     17152 c---------------
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38813739 11 +  39242232 cctg-ccct----gtg
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21219435 11 -  21565898 catg-ccct----gtg
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       36554 11 -     53127 catg-ccct----gtg
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        3840 11 +      7159 cctg-ccct----gtg
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       11357 11 -     27947 catg-ccct----gtg
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         11330 11 +     17596 catg-ccct----gtg
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                           555 11 +     26000 catg-ccct----gtg
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             18434 11 -     52598 agtg-ccat----gtg
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           13784 11 +     57038 agtg-ccat----gtg
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           7724  9 +     11226 ctg---cct----gtg
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18425295 11 -  18827391 cctg-ccct----gtg
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       11736 11 -     50209 cctg-ccct----gtg
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135418742 11 + 135778131 CCTG-CCCT----GTG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1907256 11 +   2368649 CCTG-CCCT----GTG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199946928 11 + 200372422 cctg-ccct----gtg
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              33800 11 +     84244 cctg-ccct----gtg
i Colobus_polykomos.k141_906115                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             26236  9 -     87169 ctcg-ccca----a--
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 23
s Ctenodactylus_gundi.CteGun_scaffold_65                    834514 11 +   1526836 cttg-gcat----atg
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12534605 11 -  12879189 aatg-ccct----gtg
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  671029  1 +   1390856 -------------g--
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 3 I 26
s Diceros_bicornis.DicBicMic_scaffold_5955                    3782  3 +    198055 cct-------------
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 27
s Enhydra_lutris.KZ291758.1                               16327071  9 -  41312741 cttg-ccca----a--
i Enhydra_lutris.KZ291758.1                              C 0 I 23
s Equus_asinus.JREZ01000139.1                              1281074  9 +   4378816 ctcg-ccca----g--
i Equus_asinus.JREZ01000139.1                            C 0 I 27
s Equus_caballus.CM000403.2                               18528894  9 -  39960074 ctcg-ccca----g--
i Equus_caballus.CM000403.2                              C 0 I 27
s Equus_przewalskii.KK951119.1                               30909  9 +    498745 ctcg-ccca----g--
i Equus_przewalskii.KK951119.1                           C 0 I 27
s Erythrocebus_patas.Contig38                             21201937 11 -  21539334 cctg-cccc----gtg
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              11118 11 -     14127 agtg-ccat----gta
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                3816 11 -     16928 agtg-ccat----gta
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              12849 11 -     25546 agtg-ccat----gtg
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            10034 11 +     26330 agtg-ccat----gtg
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 11282 11 +     23973 agtg-ccat----gta
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                10034 11 +     75513 agtg-ccat----gtg
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  7985 11 +     97555 agtg-ccat----gta
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            10913 11 +     26496 agtg-ccat----gtg
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  1518 11 -     17153 agtg-ccat----gta
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              11094 11 +    111500 agtg-ccat----gta
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20234933  9 + 206538554 gttg-tcca----a--
i Felis_catus.CM001381.2                                 C 0 I 23
s Felis_catus_fca126.CM031415.1                           20193777  9 + 205367284 gttg-tcca----a--
i Felis_catus_fca126.CM031415.1                          C 0 I 23
s Felis_nigripes.FelNig_flattened_line_20823                  7289  9 -     36744 gttg-tcca----a--
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 23
s Galeopterus_variegatus.GalVar_scaffold_266699               1584 11 +      2098 cttg-ctct----att
i Galeopterus_variegatus.GalVar_scaffold_266699          C 0 C 0
s Gorilla_beringei.k141_3596273                              12667 11 -     32273 ctta-ccct----gtg
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186334815 11 + 186649187 ctta-ccct----gtg
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   31881 11 +     78134 ctgg-ccct----ggg
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_1720546                         43002 11 +     55949 cttg-ccct----acg
i Hapalemur_alaotrensis.k141_1720546                     I 43 C 0
s Hapalemur_gilberti.k141_339145                             25704 11 +     40576 cttg-ccct----acg
i Hapalemur_gilberti.k141_339145                         I 43 C 0
s Hapalemur_griseus.k141_305293                              17622 11 +     29761 cttg-ccct----acg
i Hapalemur_griseus.k141_305293                          I 43 C 0
s Hapalemur_meridionalis.k141_659797                         43019 11 -     73828 cttg-ccct----acg
i Hapalemur_meridionalis.k141_659797                     I 43 C 0
s Hapalemur_occidentalis.k141_907772                         10893 15 -     16460 agtg-ccatccatgtg
i Hapalemur_occidentalis.k141_907772                     C 0 I 17
s Helogale_parvula.HelPar_flattened_line_2585               240069  9 +    327341 cttg-tcca----a--
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 23
s Hoolock_leuconedys.ctg274                                    431510 11 +    630532 cttg-ccct----gtg
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  42217  9 +     55795 cttg-tcca----a--
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 23
s Hylobates_agilis.k141_307679                               14444 11 -     15490 cttg-ccct----gtg
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              56450 11 +     67168 cttg-ccct----gtg
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189540100 11 - 191637585 cttg-cccc----gtg
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3332993 12 -  11177569 cttgcccct----gtg
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7517028 11 -   7955117 atgg-ccct----gtg
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   19865 11 +     31101 agtg-ccat----gtg
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15521422 11 -  30322482 agtg-ccat----gtg
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        4494  9 +     64341 ctg---cct----gtg
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           1554  9 +      4941 ctg---cct----gtg
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4422  9 +     35603 ctg---cct----gtg
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    25850  9 +     38576 ctg---cct----gtg
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         22547  9 +     66356 ctg---cct----gtg
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          8316 11 -     23766 agcg-ccat----gtg
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             26263 11 +     45836 agtg-ccat----gtg
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_320948                           546 11 -      1719 agtg-ccat----gtg
i Lepilemur_ruficaudatus.k141_320948                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      24318 11 +     54090 agtg-ccat----gtg
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3040205  9 +   3914936 cttg-ccca----a--
i Leptonychotes_weddellii.KB714746.1                     C 0 I 23
s Lophocebus_aterrimus.ctg367                              1433867 11 +   1826925 cctg-ccct----gtg
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17953002  9 -  59628241 cttg-cccg----a--
i Lycaon_pictus.CM007581.1                               C 0 I 23
s Macaca_arctoides.k141_2326796                               3688 11 +     40492 cctg-ccct----gtg
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59672942 11 +  60120075 cctg-ccct----gtg
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  9444 11 -     26193 cctg-ccct----gtg
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            77240 11 -    114318 cctg-ccct----gtg
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  2955 11 -     23192 cctg-ccct----gtg
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                12407 11 -     29190 cctg-ccct----gtg
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  20975 11 +     37952 cctg-ccct----gtg
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186836063 11 + 187317192 CCTG-CCCT----GTG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25454626 11 -  25927173 CCTG-CCCT----GTG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  76824 11 +     89720 cctg-ccct----gtg
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 3821 11 +     20474 cctg-ccct----gtg
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   3623 11 -     14993 cctg-ccct----gtg
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  326493 11 -    668171 cctg-ccct----gtg
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 1925 11 -     24072 cctg-ccct----gtg
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               22562 11 -     45290 cctg-ccct----gtg
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23934110 11 -  24302211 cctg-ccct----gtg
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               348286 11 +    752769 cctg-ccct----gtg
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              17224  9 +    737560 ttca-cctg----a--
i Manis_javanica.JSZB01003497.1                          C 0 I 19
s Manis_pentadactyla.KN006162.1                              48609  9 -    317179 ttta-cctg----a--
i Manis_pentadactyla.KN006162.1                          C 0 I 19
s Marmota_marmota.CZRN01000018.1                          33099340 11 -  40650429 atgg-ccct----gtg
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              7779  9 +     13704 cttg-ccaa----a--
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 23
s Mico_argentatus.k141_1239457                                2639  9 -      7380 ctg---cct----gtc
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               1709  9 +     18990 ctg---cct----gtc
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      2644  9 -      7356 ctg---cct----gtc
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18288808 11 -  93316391 AGTG-CCAT----GTG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_534055                           5863 11 -     28506 cctg-ccct----gtg
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         3042  9 -      8324 cttg-ccca----a--
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 23
s Mirza_zaza.k141_952172                                      6378 11 -     37649 agtg-ccat----gtg
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 139067  9 -    366855 tttg-tccc----a--
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 23
s Mungos_mungo.MunMun_flattened_line_23663                   33172  9 +     37127 cttg-tcca----a--
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 23
s Muscardinus_avellanarius.MusAve_scaffold_82313              4135 11 +     14296 ctgg-actt----ggg
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               298960  9 -  14710649 ctct-ccca----a--
i Mustela_putorius.JH418006.1                            C 0 I 23
s Nasalis_larvatus.k141_413338                               11858 11 +     21681 cctg-ccct----gtg
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    757655  9 +    783361 cttg-tcca----a--
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 25
s Nyctereutes_procyonoides.CAJHUB010000658.1               9147262  9 -   9404916 cttg-ccca----a--
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 23
s Odobenus_rosmarus.KB229312.1                              504348  9 -   2017862 cttg-ccca----a--
i Odobenus_rosmarus.KB229312.1                           C 0 I 23
s Otocyon_megalotis.JAEUCK010005147.1                       460017  9 -    559221 cttg-ccca----a--
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 23
s Pan_paniscus.KQ411613.1                                    40785 11 +     80009 CTTA-CCCT----GTG
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189139677 11 + 189151597 CTTA-CCCT----GTG
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  148941  9 +    230217 gttg-tcca----a--
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 23
s Panthera_pardus.KV860321.1                                262148  9 +  18783137 gttg-tcca----a--
i Panthera_pardus.KV860321.1                             C 0 I 23
s Panthera_tigris.KE722367.1                               4718784  9 -   8748460 gttg-tcca----a--
i Panthera_tigris.KE722367.1                             C 0 I 23
s Papio_anubis.CM001495.2                                183439896 11 + 183742232 CCTG-CCCT----GTG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             3589 11 +     20448 cctg-ccct----gtg
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20560394 11 +  20919399 cctg-ccct----gtg
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   2332 11 +     41871 cctg-ccct----gtg
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     5618 11 +     27711 cctg-ccct----gtg
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  5697 11 +      9205 cctg-ccct----gtg
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10402  9 -     78924 cttg-tcca----g--
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 23
s Piliocolobus_badius.k141_1234363                           40372 11 +     62158 cctg-ccct----gtg
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        35094 11 +     89929 cctg-ccct----gtg
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            36510 11 +     51399 cctg-ccct----gtg
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14292748 11 -  14605196 CCTG-CCCT----GTG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189127819 11 + 189387572 cttg-ccct----gtg
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9567427 11 +   9816681 cttg-ccct----gtg
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               70022 11 -     81375 cctg-ccct----gtg
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              1842 11 +     19060 cctg-ccct----gtg
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000849.1                            3563824 11 -   3616207 CTTG-CCCT----acg
i Prolemur_simus.MPIZ01000849.1                          I 43 C 0
s Propithecus_coquerelli.NW_012148875.1                     988063 11 +   2598838 AGTG-CCAT----GTG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          26374 11 +     38485 agtg-ccat----gtg
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             2533 11 +      4256 agtg-ccat----gtg
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          23893 11 +     35766 ggtg-ccat----gtg
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           2075 11 -     24134 agtg-ccat----gtg
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        25888 11 -     67325 agtg-ccat----gtg
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           2126 11 -      6182 agtg-ccat----gtg
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            12462  9 -     21811 cttg-cccc----a--
i Pteronotus_parnellii.KE909381.1                        C 0 I 23
s Pteronura_brasiliensis.PteBra_flattened_line_31117         37978  9 +     42204 cttg-ccca----a--
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 23
s Puma_concolor.QAVW01001104.1                            20272063  9 -  38429054 gttg-tcca----a--
i Puma_concolor.QAVW01001104.1                           C 0 I 23
s Pygathrix_cinerea.k141_1153803                             11854 11 -     91421 cctg-ccct----gtg
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7605982 11 +   7812017 cctg-ccct----gtg
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11830 11 -     72585 cctg-ccct----gtg
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             3537 11 -     11128 cctg-tcct----gtg
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91232892 11 - 195417433 CCTG-CCCT----GTG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7668541 11 +   7961872 cctg-tcct----gtg
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_2619299                               4749  9 -      8359 ctg---cct----gtg
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            11058  9 -     13588 ctg---cct----gtg
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              4695  9 -      6207 ctg---cct----gtg
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               10422  9 +     13640 ctg---cct----gtg
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               5285  9 +      8564 ctg---cct----gtg
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209465562  9 + 209938924 ctg---cct----gtg
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 4775  9 -      9399 ctg---cct----gtg
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 1923  9 +      3421 ctg---cct----gtg
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119948107  9 - 121099817 CTG---CCT----GGG
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       20574  9 +     46362 ctg---cct----ggg
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               20669  9 +     45824 ctg---cct----ggg
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             37284  9 -     64574 ctg---cct----ggg
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                                290  9 -     23631 ctg---cct----ggg
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 20562  9 -     61129 ctg---cct----ggg
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          16365 11 -     19888 cctg-ccct----gtg
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      23567 11 +     39453 cctg-ccct----gtg
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            4093 11 +     27826 cctg-ccct----gtg
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             3614 11 -     19483 cctg-ccct----gtg
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      3676 11 +      7198 cctg-ccct----gtg
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         11936 11 +     15514 cctg-ccct----gtg
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_5840            188978  9 -    191337 CTTG-TTCA----C--
i Solenodon_paradoxus.SolPar_flattened_line_5840         C 0 N 0
s Spermophilus_dauricus.KZ294078.1                         1950112 11 -   3870691 atgg-ccct----gtg
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             28505  9 +     97271 cgta-caca----a--
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 21
s Suricata_suricatta.SurSur_flattened_line_6629              16066  9 -    196729 cttg-tcca----a--
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 23
s Sus_scrofa.JH118708.1                                      32985  9 -     47482 cttg-ccca----a--
i Sus_scrofa.JH118708.1                                  C 0 I 27
s Symphalangus_syndactylus.tarseq_199                      1090142 11 -   1523678 cttg-ccct----gtg
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 8440  9 +     41958 cttg-ccca----a--
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 23
s Tapirus_indicus.TapInd_scaffold_9301                      116511  9 -    156842 cttg-ccca----c--
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 25
s Tapirus_terrestris.TapTer_scaffold_755                    384962  9 +    539355 cttg-ccca----c--
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 25
s Tarsius_lariang.k141_2201908                               12458 11 +     70052 tttg-cctt----atg
i Tarsius_lariang.k141_2201908                           C 0 I 5788
s Tarsius_wallacei.k141_780063                               16763 11 +     25099 tttg-cctt----atg
i Tarsius_wallacei.k141_780063                           C 0 I 5787
s Theropithecus_gelada.CM009954.1                        186425261 11 + 186847797 CCTG-CCCT----GTG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          7666 11 -     20410 cctg-ccct----gtg
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    11861 11 +     15221 cctg-ccct----gtg
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        7767 11 +     19930 cctg-ccct----gtg
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       4197 11 -     19997 cctg-ccct----gtg
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            44317 11 -     60166 cctg-ccct----gtg
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        11788 11 -     27529 cctg-ccct----gtg
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     11730 11 -     18194 cctg-ccct----gtg
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           5464 11 -     21137 cctg-ccct----gtg
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    4167 11 -     10723 cctg-ccct----gtg
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         3319 11 +      9834 cctg-ccct----gtg
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        21634 11 +     32220 cctg-ccct----gtg
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5935734 11 +   6242583 cctg-ccct----gtg
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        4982 11 +     20839 cctg-ccct----gtg
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2152210  7 +   4065304 cctg-ccc--------
i Tupaia_chinensis.KB320699.1                            C 0 I 3
s Tupaia_tana.TupTan_flattened_line_97126                     5523  7 -     10553 cctg-ccc--------
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 3
s Ursus_maritimus.KK499267.1                               4848223  9 -   5085361 tttg-ccca----a--
i Ursus_maritimus.KK499267.1                             C 0 I 23
s Varecia_rubra.k141_590885                                   8756 11 +     50397 agtg-ccat----gtg
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              8811 11 +     24756 agtg-ccat----gtg
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5369656  9 -   5488506 cctg-ccca----a--
i Vicugna_pacos.KN270157.1                               C 0 I 27
s Vulpes_lagopus.VulLag_flattened_line_30954                  8674  9 -     43706 cttg-ccca----a--
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 19
s Xerus_inauris.XerIna_scaffold_48378                        21491 11 -     24430 cttt-ctcc----atg
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          2904  9 +     86975 cttg-ccca----a--
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 23
e Otolemur_garnettii.GL873799.1                             692983 10 -   1103335 I
e Otolemur_crassicaudatus.k141_222918                          816 10 +      8798 I
e Galago_senegalensis.k141_631886                              981 10 +     11339 I
e Galago_moholi.ctg2040                                     423274 10 -    453645 I
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519  0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188  0 +      1777 C
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Mus_pahari.LT608297.1                                   31351706  0 -  89631738 C
e Mus_spretus.CM004101.1                                  90749500  0 - 130317789 C
e Mus_musculus.chr8                                       87647421  0 - 129401213 C
e Mus_caroli.LT608237.1                                   84358433  0 - 120012414 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Loris_tardigradus.ctg83                                  1001514 10 +   6120653 I
e Loris_lydekkerianus.k141_2539221                            2677 10 +     11245 I
e Perodicticus_potto.k141_1092580                             5058 10 +     25941 I
e Perodicticus_ibeanus.k141_855320                            6685 10 +     13100 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      11935  1 +     63895 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383  9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   2809  0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 70244  0 +    116680 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    10676  0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                85637 14 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rattus_norvegicus.chr16                                 53567515  0 +  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Pteropus_vampyrus.KN525825.1                             1357734 14 +   4952924 I
e Pteropus_alecto.KB030862.1                              22974644 14 +  28871421 I
e Psammomys_obesus.NESX01036370.1                             6982  0 -     21651 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18191253  0 -  18517816 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Oryctolagus_cuniculus.CM000791.1                        67144574 44 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    76654  0 +    102263 C
e Ondatra_zibethicus.OndZib_scaffold_46174                   21202  0 +     28053 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1360483  0 +   3988456 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105746918 10 + 199412804 I
e Nycticebus_coucang.k141_5327727                             4177 10 +      8486 I
e Nycticebus_bengalensis.LG01                            102576491 10 - 196305487 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186890  0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11257107  0 -  27267610 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12179856  0 -  29670104 C
e Meriones_unguiculatus.MerUng_scaffold_7390                 29331  0 +    140813 C
e Megaderma_lyra.MegLyr_scaffold_4542                         8178  0 -    207569 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 88455  4 +     94391 I
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3730 44 -     14121 I
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8272963  1 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_29171               41045  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       109621  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Galagoides_demidoff.k141_1959596                            4781 10 +      6795 I
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Ellobius_talpinus.LOJH01109367.1                            3007  0 -      6299 C
e Ellobius_lutescens.LOEQ01008920.1                          16953  0 -    110024 C
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Eidolon_helvum.KE759718.1                                   8374  9 +     11740 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            61949  0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Crocidura_indochinensis.CroInd_scaffold_287352              1624  0 +      4208 I
e Cricetulus_griseus.LT883664.1                           11664758  8 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 47433  0 +     63868 C
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          11837  0 -     20389 C
e Condylura_cristata.JH655891.1                           17547132  5 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            171068  0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15969  0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            5641  0 -      6351 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Arctocebus_calabarensis.k141_288239                        16452 10 +     17124 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     66596  1 -     89534 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     67723  0 +     87051 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       3444 5 +     62944 catct
s Allenopithecus_nigroviridis.k141_3361533                   11373 5 -     52922 catct
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         11307 5 -     28001 catct
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          1753 5 -     18505 catct
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           2602 5 -     12518 catct
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                               206 5 -     27731 tacct
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                 329 5 +      3134 tacct
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                                467 5 -     45847 tacct
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                21671 5 +     25266 cacct
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                            855 5 +      2906 cacct
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            14968 5 -     18578 cacct
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                               358 5 +     47717 cacct
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                              486 5 -      3544 cacct
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             11705 5 +     50774 cacct
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  12337 5 -     33861 catct
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            12358 5 -     34016 catct
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4294753 5 -   5030052 CATCT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             12359 5 -     34685 catct
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               25480 5 -     47192 catct
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       8987 5 +     20879 tctct
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Avahi_laniger.k141_765380                                  51018 5 -     92717 tttcg
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              51647 5 +     85213 tttcg
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             2102 5 -     10423 catct
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             21589 5 +     31915 catct
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            2069 5 +      5267 catct
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23587281 5 - 189096842 CATCT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              8813 5 -     12001 catct
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Carlito_syrichta.NW_007259797.1                           148190 5 -    496798 TATTA
i Carlito_syrichta.NW_007259797.1                        I 5359 I 5183
s Castor_canadensis.CasCan_scaffold_2074                    135443 5 +    179628 tatca
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          6722 5 -     11392 catct
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               2820 5 -      7577 catct
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_2057972                         3799 5 -      6281 tatta
i Cephalopachus_bancanus.k141_2057972                    N 0 N 0
s Cercocebus_atys.KQ010504.1                               4472333 5 +   4669795 CATCT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        10880 5 -     19203 catct
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           5302 5 +      8260 catct
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           5529 5 +     27781 catct
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         5684 5 -     20310 catct
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           8668 5 +     29689 catct
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            3096 5 +      9989 catct
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          11345 5 -     27936 catct
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                             217 5 -     17152 tctct
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38813750 5 +  39242232 catct
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21219446 5 -  21565898 cctct
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       36565 5 -     53127 cctct
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        3851 5 +      7159 catct
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       11368 5 -     27947 cctct
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         11341 5 +     17596 cctct
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                           566 5 +     26000 catct
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             18445 5 -     52598 tgtca
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           13795 5 +     57038 tgtcg
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           7733 5 +     11226 agtct
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18425306 5 -  18827391 catct
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       11747 5 -     50209 catct
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135418753 5 + 135778131 CATCT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1907267 5 +   2368649 CATCT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199946939 5 + 200372422 catct
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              33811 5 +     84244 catct
i Colobus_polykomos.k141_906115                          C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    834525 5 +   1526836 cactt
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12534616 5 -  12879189 cgttt
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Erythrocebus_patas.Contig38                             21201948 5 -  21539334 catct
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              11129 5 -     14127 tgtca
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                3827 5 -     16928 tgtca
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              12860 5 -     25546 tgtca
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            10045 5 +     26330 tgtca
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 11293 5 +     23973 tgtca
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                10045 5 +     75513 tgtca
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  7996 5 +     97555 tgtca
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            10924 5 +     26496 tgtca
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  1529 5 -     17153 tgtca
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              11105 5 +    111500 tgtca
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_266699               1595 5 +      2098 catct
i Galeopterus_variegatus.GalVar_scaffold_266699          C 0 C 0
s Gorilla_beringei.k141_3596273                              12678 5 -     32273 catct
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186334826 5 + 186649187 catct
i Gorilla_gorilla.LT578341.1                             C 0 I 13
s Graphiurus_murinus.GraMur_scaffold_10447                   31892 5 +     78134 catct
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_1720546                         43013 5 +     55949 catct
i Hapalemur_alaotrensis.k141_1720546                     C 0 I 33
s Hapalemur_gilberti.k141_339145                             25715 5 +     40576 catct
i Hapalemur_gilberti.k141_339145                         C 0 I 204
s Hapalemur_griseus.k141_305293                              17633 5 +     29761 catct
i Hapalemur_griseus.k141_305293                          C 0 I 204
s Hapalemur_meridionalis.k141_659797                         43030 5 -     73828 catct
i Hapalemur_meridionalis.k141_659797                     C 0 I 204
s Hapalemur_occidentalis.k141_380049                         31804 5 -     62596 catct
i Hapalemur_occidentalis.k141_380049                     I 54 C 0
s Hoolock_leuconedys.ctg274                                    431521 5 +    630532 catct
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_307679                               14455 5 -     15490 catct
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              56461 5 +     67168 catct
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189540111 5 - 191637585 catct
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3333005 5 -  11177569 catct
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7517039 5 -   7955117 cctct
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   19876 5 +     31101 tgtcg
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15521433 5 -  30322482 tgtca
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        4503 5 +     64341 catct
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           1563 5 +      4941 cgtct
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4431 5 +     35603 catct
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    25859 5 +     38576 catct
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         22556 5 +     66356 catct
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          8327 5 -     23766 tatca
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             26274 5 +     45836 tatca
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_320948                           557 5 -      1719 tgtca
i Lepilemur_ruficaudatus.k141_320948                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      24329 5 +     54090 tatca
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Lophocebus_aterrimus.ctg367                              1433878 5 +   1826925 catct
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                               3699 5 +     40492 catct
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59672953 5 +  60120075 catct
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  9455 5 -     26193 catct
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            77251 5 -    114318 catct
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  2966 5 -     23192 catct
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                12418 5 -     29190 catct
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  20986 5 +     37952 catct
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186836074 5 + 187317192 CATCT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25454637 5 -  25927173 CATCT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  76835 5 +     89720 catct
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 3832 5 +     20474 catct
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   3634 5 -     14993 catct
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  326504 5 -    668171 catct
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 1936 5 -     24072 catct
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               22573 5 -     45290 catct
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23934121 5 -  24302211 catct
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               348297 5 +    752769 catct
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33099351 5 -  40650429 cctct
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mico_argentatus.k141_1239457                                2648 5 -      7380 catct
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               1718 5 +     18990 catct
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      2653 5 -      7356 catct
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18288819 5 -  93316391 TGTCG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_534055                           5874 5 -     28506 catct
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirza_zaza.k141_952172                                      6389 5 -     37649 tgtcg
i Mirza_zaza.k141_952172                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              4146 5 +     14296 caact
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Nasalis_larvatus.k141_413338                               11869 5 +     21681 catct
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Pan_paniscus.KQ411613.1                                    40796 5 +     80009 CATCT
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189139688 5 + 189151597 CATCT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                183439907 5 + 183742232 CATCT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             3600 5 +     20448 catct
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20560405 5 +  20919399 catct
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   2343 5 +     41871 catct
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     5629 5 +     27711 catct
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  5708 5 +      9205 catct
i Papio_ursinus.k141_3428135                             C 0 C 0
s Piliocolobus_badius.k141_1234363                           40383 5 +     62158 catct
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        35105 5 +     89929 catct
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            36521 5 +     51399 catct
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14292759 5 -  14605196 CATCT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189127830 5 + 189387572 catct
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9567438 5 +   9816681 catct
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               70033 5 -     81375 catct
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              1853 5 +     19060 catct
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000849.1                            3563835 5 -   3616207 catct
i Prolemur_simus.MPIZ01000849.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     988074 5 +   2598838 TGTCG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          26385 5 +     38485 tgtcg
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             2544 5 +      4256 tgtcg
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          23904 5 +     35766 tgtcg
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           2086 5 -     24134 tgttg
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        25899 5 -     67325 tgtcg
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           2137 5 -      6182 tgtcg
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pygathrix_cinerea.k141_1153803                             11865 5 -     91421 catct
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7605993 5 +   7812017 catct
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11841 5 -     72585 catct
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             3548 5 -     11128 catct
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91232903 5 - 195417433 CATCT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7668552 5 +   7961872 catct
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_2619299                               4758 5 -      8359 agtct
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            11067 5 -     13588 agtct
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              4704 5 -      6207 agtct
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               10431 5 +     13640 agtct
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               5294 5 +      8564 agtct
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209465571 5 + 209938924 agtct
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 4784 5 -      9399 agtct
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 1932 5 +      3421 agtct
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119948116 5 - 121099817 CATCT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       20583 5 +     46362 catct
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               20678 5 +     45824 catct
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             37293 5 -     64574 catct
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                                299 5 -     23631 catct
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 20571 5 -     61129 catct
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          16376 5 -     19888 catct
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      23578 5 +     39453 catct
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            4104 5 +     27826 catct
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             3625 5 -     19483 catct
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      3687 5 +      7198 catct
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         11947 5 +     15514 catct
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1950123 5 -   3870691 cctct
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1090153 5 -   1523678 catct
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_2201908                               18257 5 +     70052 tatta
i Tarsius_lariang.k141_2201908                           I 5788 I 5220
s Tarsius_wallacei.k141_780063                               22561 5 +     25099 tatta
i Tarsius_wallacei.k141_780063                           I 5787 N 0
s Theropithecus_gelada.CM009954.1                        186425272 5 + 186847797 CATCT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          7677 5 -     20410 catct
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    11872 5 +     15221 catct
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        7778 5 +     19930 catct
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       4208 5 -     19997 catct
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            44328 5 -     60166 catct
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        11799 5 -     27529 catct
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     11741 5 -     18194 catct
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           5475 5 -     21137 catct
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    4178 5 -     10723 catct
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         3330 5 +      9834 catct
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        21645 5 +     32220 catct
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5935745 5 +   6242583 catct
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        4993 5 +     20839 catct
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2152220 5 +   4065304 catct
i Tupaia_chinensis.KB320699.1                            I 3 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     5533 5 -     10553 catct
i Tupaia_tana.TupTan_flattened_line_97126                I 3 C 0
s Varecia_rubra.k141_590885                                   8767 5 +     50397 tgtcg
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              8822 5 +     24756 tgtca
i Varecia_variegata.k141_1128296                         C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        21502 5 -     24430 cctct
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
e Otolemur_garnettii.GL873799.1                             692983 10 -   1103335 I
e Otolemur_crassicaudatus.k141_222918                          816 10 +      8798 I
e Galago_senegalensis.k141_631886                              981 10 +     11339 I
e Galago_moholi.ctg2040                                     423274 10 -    453645 I
e Sapajus_macrocephalus.k141_351809                          54316 0 -     80660 C
e Sapajus_apella.ctg103                                    5419275 0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519 0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188 0 +      1777 C
e Cebus_albifrons.Contig27                                25650611 0 +  26074798 C
e Mus_pahari.LT608297.1                                   31351706 0 -  89631738 C
e Mus_spretus.CM004101.1                                  90749500 0 - 130317789 C
e Mus_musculus.chr8                                       87647421 0 - 129401213 C
e Mus_caroli.LT608237.1                                   84358433 0 - 120012414 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906 0 -     10935 C
e Loris_tardigradus.ctg83                                  1001514 10 +   6120653 I
e Loris_lydekkerianus.k141_2539221                            2677 10 +     11245 I
e Perodicticus_potto.k141_1092580                             5058 10 +     25941 I
e Perodicticus_ibeanus.k141_855320                            6685 10 +     13100 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      11935 1 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_17732          2913 23 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                  8683 19 -     43706 I
e Vicugna_pacos.KN270157.1                                 5369665 27 -   5488506 I
e Ursus_maritimus.KK499267.1                               4848232 23 -   5085361 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383 9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553 7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   2809 0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937 0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    384971 25 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      116520 25 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 70244 0 +    116680 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                 8449 23 +     41958 I
e Sus_scrofa.JH118708.1                                      32994 27 -     47482 I
e Suricata_suricatta.SurSur_flattened_line_6629              16075 23 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             28514 21 +     97271 I
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    10676 0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                85637 14 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rattus_norvegicus.chr16                                 53567515 0 +  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20272072 23 -  38429054 I
e Pteropus_vampyrus.KN525825.1                             1357734 14 +   4952924 I
e Pteropus_alecto.KB030862.1                              22974644 14 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         37987 23 +     42204 I
e Pteronotus_parnellii.KE909381.1                            12471 23 -     21811 I
e Psammomys_obesus.NESX01036370.1                             6982 0 -     21651 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10240 0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823 1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813 0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18191253 0 -  18517816 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10411 23 -     78924 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4718793 23 -   8748460 I
e Panthera_pardus.KV860321.1                                262157 23 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  148950 23 +    230217 I
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       460026 23 -    559221 I
e Oryctolagus_cuniculus.CM000791.1                        67144574 44 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    76654 0 +    102263 C
e Ondatra_zibethicus.OndZib_scaffold_46174                   21202 0 +     28053 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              504357 23 -   2017862 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1360483 0 +   3988456 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105746918 10 + 199412804 I
e Nycticebus_coucang.k141_5327727                             4177 10 +      8486 I
e Nycticebus_bengalensis.LG01                            102576491 10 - 196305487 I
e Nyctereutes_procyonoides.CAJHUB010000658.1               9147271 23 -   9404916 I
e Noctilio_leporinus.NocLep_scaffold_251                    757664 25 +    783361 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805 0 +       996 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186890 0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33016 1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456 1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390 1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692 1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               298969 23 -  14710649 I
e Murina_feae.MurFea_scaffold_85699                           5520 1 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   33181 23 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 139076 23 -    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         3051 23 -      8324 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686 0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11257107 0 -  27267610 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009 7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12179856 0 -  29670104 C
e Meriones_unguiculatus.MerUng_scaffold_7390                 29331 0 +    140813 C
e Mellivora_capensis.MelCap_flattened_line_69365              7788 23 +     13704 I
e Megaderma_lyra.MegLyr_scaffold_4542                         8178 0 -    207569 C
e Manis_pentadactyla.KN006162.1                              48618 19 -    317179 I
e Manis_javanica.JSZB01003497.1                              17233 19 +    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_8222                 88455 4 +     94391 I
e Lycaon_pictus.CM007581.1                                17953011 23 -  59628241 I
e Loxodonta_africana.GL010049.1                            4214777 0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3730 44 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3040214 23 +   3914936 I
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8272963 1 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547 0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  42226 23 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_29171               41045 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       109621 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491 0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               240078 23 +    327341 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Galagoides_demidoff.k141_1959596                            4781 10 +      6795 I
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  7298 23 -     36744 I
e Felis_catus_fca126.CM031415.1                           20193786 23 + 205367284 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Equus_przewalskii.KK951119.1                               30918 27 +    498745 I
e Equus_caballus.CM000403.2                               18528903 27 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1281083 27 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2144447 1 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16327080 23 -  41312741 I
e Ellobius_talpinus.LOJH01109367.1                            3007 0 -      6299 C
e Ellobius_lutescens.LOEQ01008920.1                          16953 0 -    110024 C
e Elephantulus_edwardii.JH947257.1                         1089268 0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Eidolon_helvum.KE759718.1                                   8374 9 +     11740 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084 0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    3785 27 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  671030 26 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8628495 7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            61949 0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             26245 23 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_287352              1624 0 +      4208 I
e Cricetulus_griseus.LT883664.1                           11664758 8 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 47433 0 +     63868 C
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          11837 0 -     20389 C
e Condylura_cristata.JH655891.1                           17547132 5 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            171068 0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15969 0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498 0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            5641 0 -      6351 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634            204 27 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99291 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157 0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     90487 27 +    217609 I
e Carollia_perspicillata.CarPer_scaffold_92756                3465 7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18498071 23 +  63665305 I
e Canis_lupus_familiaris.chr16                            17956771 23 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9032506 23 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    183120 23 -    185531 I
e CanFam4.chr16                                           17797063 23 -  60362399 I
e Camelus_ferus.KB017975.1                                  400905 27 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2332629 27 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10000165 27 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102 7 +     43469 I
e Arctocebus_calabarensis.k141_288239                        16452 10 +     17124 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691 7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     66596 1 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             77101 23 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9508326 23 -  29979442 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     67723 0 +     87051 C
e Acinonyx_jubatus.LLWD01001279.1                           825076 23 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       3449 13 +     62944 gtcgca-----tgtg-gct
s Acomys_cahirinus.AcoCah_scaffold_12655                     67723 14 +     87051 ----ctgcttctcat-tgc
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     66597  4 -     89534 -----------GTGG----
i Allactaga_bullata.AllBul_scaffold_9566                 I 1 I 1040
s Allenopithecus_nigroviridis.k141_3361533                   11378 11 -     52922 ctgtca-----tg---gct
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         11312 11 -     28001 ctctca-----tg---gct
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          1758 11 -     18505 ctctca-----tg---gct
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           2607 11 -     12518 ctctca-----tg---gct
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                               211 13 -     27731 cttaga-----tgtg-gct
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                 334 13 +      3134 cttaga-----tgtg-gct
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                                472 13 -     45847 cttgca-----tgtg-gct
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                21676 13 +     25266 cttgca-----tgtg-gct
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                            860 13 +      2906 cttgca-----tgtg-gct
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            14973 13 -     18578 cttgca-----tgtg-gct
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                               363 13 +     47717 cttgca-----tgtg-gct
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                              491 13 -      3544 cttgca-----tgtg-gct
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             11710 13 +     50774 cttgca-----tgtg-gct
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  12342 13 -     33861 cttgca-----tgtg-gct
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            12363 13 -     34016 cttgca-----tgtg-gct
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4294758 13 -   5030052 CTTGCA-----TGTG-GCT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             12364 13 -     34685 cttgca-----tgtg-gct
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               25485 13 -     47192 cttgca-----tgtg-gct
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       8992 13 +     20879 cttcct-----tttg-act
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Avahi_laniger.k141_765380                                  51023 12 -     92717 tttcca-----tctg-gc-
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              51652 12 +     85213 tttcca-----tctg-gc-
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             2107 13 -     10423 cttgca-----tgtg-gct
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             21594 13 +     31915 cttgca-----tgtg-act
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            2074 13 +      5267 cttgca-----tgtg-gct
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23587286 13 - 189096842 CTTGCA-----TGTG-GCT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              8818 13 -     12001 cttgca-----tgtg-gct
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Carlito_syrichta.NW_007259797.1                           153378 13 -    496798 CTTCCA-----TTTG-GCT
i Carlito_syrichta.NW_007259797.1                        I 5183 C 0
s Castor_canadensis.CasCan_scaffold_2074                    135448 13 +    179628 ctttct-----tttg-gct
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          6727 13 -     11392 cttgca-----tgtg-gct
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               2825 13 -      7577 cttgca-----tgtg-gct
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         2877 13 +     31688 cttcca-----tttg-gct
i Cephalopachus_bancanus.k141_1423433                    N 0 C 0
s Cercocebus_atys.KQ010504.1                               4472338 11 +   4669795 CTCTCA-----TG---GCT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        10885 11 -     19203 ctctca-----tg---gct
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           5307 11 +      8260 ctctca-----tg---gct
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           5534 11 +     27781 ctctca-----tg---gct
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         5689 11 -     20310 ctctca-----tg---gct
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           8673 11 +     29689 ctctca-----tg---gct
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            3101 11 +      9989 ctctca-----tg---gct
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          11350 11 -     27936 ctctca-----tg---gct
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                             222 11 -     17152 ctctca-----tg---gct
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38813755 11 +  39242232 ctctca-----tg---gct
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21219451 11 -  21565898 ctctca-----tg---gct
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       36570 11 -     53127 ctctca-----tg---gct
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        3856 11 +      7159 ctctca-----tg---gct
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       11373 11 -     27947 ctctca-----tg---gct
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         11346 11 +     17596 ctctca-----tg---gct
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                           571 11 +     26000 ctctca-----tg---gct
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             18450 12 -     52598 tttcca-----tctg-gc-
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           13800 12 +     57038 tttcca-----tctg-gc-
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           7738 13 +     11226 cttgcg-----tgtg-gct
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18425311 11 -  18827391 ctgtca-----tg---gct
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       11752 11 -     50209 ctgtca-----tg---gct
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135418758 11 + 135778131 CTGTCA-----TG---GCT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1907272 13 +   2368649 CTCGCA-----TATG-GCT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199946944 13 + 200372422 cttgca-----tatg-gct
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              33816 13 +     84244 ctcgca-----tatg-gct
i Colobus_polykomos.k141_906115                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 47433 14 +     63868 ----ctgctgcttgt-tgt
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11664766 14 + 224834208 ----CTGCTAGTAGT-TGt
i Cricetulus_griseus.LT883664.1                          I 8 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    834530 13 +   1526836 ctttct-----tttg-gct
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12534621 13 -  12879189 cttccc-----tttg-gct
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          16953 14 -    110024 ----ttgCAACTCAT-TGc
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01109367.1                            3007 14 -      6299 ----ttgCAACTCAT-Tgc
i Ellobius_talpinus.LOJH01109367.1                       C 0 C 0
s Erythrocebus_patas.Contig38                             21201953 11 -  21539334 ctgtca-----tg---gct
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              11134 12 -     14127 attcca-----tctg-gc-
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                3832 12 -     16928 attcca-----tctg-gc-
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              12865 12 -     25546 atgcca-----tctg-gc-
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            10050 12 +     26330 atgcca-----tctg-gc-
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 11298 12 +     23973 attcca-----tctg-gc-
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                10050 12 +     75513 atgcca-----tctg-gc-
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  8001 12 +     97555 attcca-----tctg-gc-
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            10929 12 +     26496 attcca-----tctg-gc-
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  1534 12 -     17153 attcca-----tctg-gc-
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              11110 12 +    111500 attcca-----tctg-gc-
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_266699               1600 13 +      2098 cttcca-----tttg-gct
i Galeopterus_variegatus.GalVar_scaffold_266699          C 0 C 0
s Gorilla_beringei.k141_3596273                              12683 13 -     32273 gtcgca-----tgtg-gct
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.CYUI03001814.1                             29194 13 -     31004 gttgca-----tgtg-gct
i Gorilla_gorilla.CYUI03001814.1                         I 34 I 105
s Graphiurus_murinus.GraMur_scaffold_10447                   31897 13 +     78134 ctttct-----ttta-gcc
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           4191 12 -     19426 attcca-----tctg-gc-
i Hapalemur_alaotrensis.k141_170648                      I 16 C 0
s Hapalemur_gilberti.k141_488810                              9335 12 -     15286 attcca-----tctg-gc-
i Hapalemur_gilberti.k141_488810                         I 16 C 0
s Hapalemur_griseus.k141_1511508                             10973 12 +     18253 attcca-----tctg-gc-
i Hapalemur_griseus.k141_1511508                         I 16 C 0
s Hapalemur_meridionalis.k141_248335                         11076 12 -     41752 gttcca-----tctg-gc-
i Hapalemur_meridionalis.k141_248335                     I 16 C 0
s Hapalemur_occidentalis.k141_380049                         31809 12 -     62596 cttccg-----tttg-gc-
i Hapalemur_occidentalis.k141_380049                     C 0 I 21
s Hoolock_leuconedys.ctg274                                    431526 13 +    630532 ctcaca-----tgtg-gct
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_307679                               14460 13 -     15490 ctcaca-----tgtg-gct
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              56466 13 +     67168 ctcaca-----tgtg-gct
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189540116 13 - 191637585 ctcaca-----tgtg-gct
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3333010 13 -  11177569 ctcaca-----tgtg-gct
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7517044 13 -   7955117 cttcct-----tttg-gct
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   19881 12 +     31101 tttcca-----tctg-gc-
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8272964  7 -   9596543 -----------ttgt-tgt
i Jaculus_jaculus.JH725527.1                             I 1 I 704
s Lemur_catta.scaffold_24                                 15521438 12 -  30322482 attcca-----tctg-gc-
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        4508 13 +     64341 cttgca-----tgtg-gct
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           1568 13 +      4941 cttgca-----tgtg-gct
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4436 13 +     35603 cttgca-----tgtg-gct
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    25864 13 +     38576 cttgca-----tgtg-act
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         22561 13 +     66356 cttgca-----tgtg-act
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          8332 12 -     23766 tttcca-----tctg-gc-
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             26279 12 +     45836 tttcca-----tctg-gc-
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_320948                           562 12 -      1719 tttcca-----tctg-gc-
i Lepilemur_ruficaudatus.k141_320948                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      24334 12 +     54090 tttcca-----tctg-gc-
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Lophocebus_aterrimus.ctg367                              1433883 11 +   1826925 ctctca-----tg---gct
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                               3704 11 +     40492 ctctca-----tg---gct
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59672958 11 +  60120075 ctctca-----tg---gct
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  9460 11 -     26193 ctctca-----tg---gct
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            77256 11 -    114318 ctctca-----tg---gct
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  2971 11 -     23192 ctctca-----tg---gct
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                12423 11 -     29190 ctctca-----tg---gct
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  20991 11 +     37952 ctctca-----tg---gct
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186836079 11 + 187317192 CTCTCA-----TG---GCT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25454642 11 -  25927173 CTCTCA-----TG---GCT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  76840 11 +     89720 ctctca-----tg---gct
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 3837 11 +     20474 ctctca-----tg---gct
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   3639 11 -     14993 ctctca-----tg---gct
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  326509 11 -    668171 ctctca-----tg---gct
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 1941 11 -     24072 ctctca-----tg---gct
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               22578 11 -     45290 ctctca-----tg---gct
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23934126 11 -  24302211 ctctca-----tg---gct
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               348302 11 +    752769 ctctca-----tg---gct
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33099356 13 -  40650429 cttcct-----tttg-gct
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 29331 14 +    140813 ----ctgctactcat-tgc
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12179856 14 -  29670104 ----TTGTTAGAAGT-TTC
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                2653 13 -      7380 cttgca-----tgtg-gct
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               1723 13 +     18990 cttgca-----tgtg-gct
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      2658 13 -      7356 cttgca-----tgtg-gct
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18288824 12 -  93316391 TTTCCA-----TCTG-GC-
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11257107 14 -  27267610 ----ttgCGACTCAT-Tgc
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miopithecus_ogouensis.k141_534055                           5879 11 -     28506 ctctca-----tg---gct
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirza_zaza.k141_952172                                      6394 12 -     37649 tttcca-----tctg-gc-
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mus_caroli.LT608237.1                                   84358433 14 - 120012414 ----atgctgCttgt-tgc
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87647421 14 - 129401213 ----cTGCTGCttgt-tgc
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31351706 14 -  89631738 ----aagctaCttgt-tgc
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90749500 14 - 130317789 ----ctGCTGCttgt-tgc
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              4151 13 +     14296 cttcct-----tttg-gct
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Nasalis_larvatus.k141_413338                               11874 13 +     21681 ctcaca-----tatg-gct
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   21202 15 +     28053 ----ttgTGACACATTTGt
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    76654 14 +    102263 ----ctgCTACTTAT-TGC
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Pan_paniscus.KQ411613.1                                    40801 13 +     80009 GTCGCA-----TGTG-GCT
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189139693 13 + 189151597 GTCGCA-----TGTG-GCT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                183439912 11 + 183742232 CTCTCA-----TG---GCT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             3605 11 +     20448 ctctca-----tg---gct
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20560410 11 +  20919399 ctctca-----tg---gct
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   2348 11 +     41871 ctctca-----tg---gct
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     5634 11 +     27711 ctctca-----tg---gct
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  5713 11 +      9205 ctctca-----tg---gct
i Papio_ursinus.k141_3428135                             C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18191253 14 -  18517816 ----ccaCTACTTAT-TGC
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Piliocolobus_badius.k141_1234363                           40388 13 +     62158 ctcgca-----tatg-gct
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        35110 13 +     89929 ctcgca-----tatg-gct
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            36526 13 +     51399 ctcgca-----tatg-gct
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14292764 13 -  14605196 CTCGCA-----TATG-GCT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189127835 13 + 189387572 ctCACA-----TGTG-GTT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9567443 13 +   9816681 ctcaca-----tgtg-gtt
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               70038 13 -     81375 ctcaca-----tatg-gct
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              1858 13 +     19060 ctcaca-----tatg-gct
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000849.1                            3563840 12 -   3616207 cttcca-----tttg-gc-
i Prolemur_simus.MPIZ01000849.1                          C 0 I 192
s Propithecus_coquerelli.NW_012148875.1                     988079 12 +   2598838 TTTCCA-----TCTG-GC-
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          26390 12 +     38485 tttcca-----tctg-gc-
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             2549 12 +      4256 tttcca-----tctg-gc-
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          23909 12 +     35766 tttcca-----tctg-gc-
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           2091 12 -     24134 tttcca-----tctg-gc-
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        25904 12 -     67325 tctcca-----tctg-gc-
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           2142 12 -      6182 tttcca-----tctg-gc-
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             6982 14 -     21651 ----ctgCTACTCAT-TGC
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pygathrix_cinerea.k141_1153803                             11870 13 -     91421 ctcgca-----tatg-gct
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7605998 13 +   7812017 ctcgca-----tatg-gct
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11846 13 -     72585 ctcgca-----tatg-gct
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53567515 14 +  90668790 ----ATGCTACTTGT-TGC
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             3553 13 -     11128 ctcgca-----tatg-gct
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91232908 13 - 195417433 CTCGCA-----TATG-GCT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7668557 13 +   7961872 ctcgca-----tatg-gct
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_2619299                               4763 13 -      8359 tttgcg-----tgtg-gct
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            11072 13 -     13588 cttgca-----tgtg-gct
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              4709 13 -      6207 cttgca-----tgtg-gct
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               10436 13 +     13640 cttgca-----tgtg-gct
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               5299 13 +      8564 cttgca-----tgtg-gct
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209465576 13 + 209938924 cttgcg-----tgtg-gct
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 4789 13 -      9399 cttgca-----tgtg-gct
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 1937 13 +      3421 cttgca-----tgtg-gct
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119948121 13 - 121099817 CTTGCC-----TGTG-GCT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       20588 13 +     46362 cttgcc-----tgtg-gct
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               20683 13 +     45824 cttgcc-----tgtg-gct
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             37298 13 -     64574 cttgcc-----tgtg-gct
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                                304 13 -     23631 cttgcc-----tgtg-gct
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 20576 13 -     61129 cttgcc-----tgtg-gct
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          16381 13 -     19888 ctcgca-----tatg-gct
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      23583 13 +     39453 ctcgca-----tatg-gct
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            4109 13 +     27826 ctcgca-----tatg-gct
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             3630 13 -     19483 ctcgca-----tatg-gct
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      3692 13 +      7198 ctcgca-----tatg-gct
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         11952 13 +     15514 ctcgca-----tatg-gct
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    10676 14 -     12148 ----ctgaTACTTGT-TTA
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1950128 13 -   3870691 cttcct-----tttg-gct
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1090158 13 -   1523678 ctcaca-----tgtg-gct
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_2201908                               23482 13 +     70052 cttcca-----tttg-gct
i Tarsius_lariang.k141_2201908                           I 5220 C 0
s Tarsius_wallacei.k141_2029956                               2827 13 +      4644 cttcca-----tttg-gct
i Tarsius_wallacei.k141_2029956                          N 0 C 0
s Theropithecus_gelada.CM009954.1                        186425277 11 + 186847797 CTCTCA-----TG---GCT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          7682 13 -     20410 ctcgca-----tatg-gct
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    11877 13 +     15221 ctcgca-----tatg-gct
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        7783 13 +     19930 ctcgca-----tatg-gct
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       4213 13 -     19997 ctcgca-----tatg-gct
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            44333 13 -     60166 ctcgca-----tatg-gct
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        11804 13 -     27529 ctcgca-----tatg-gct
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     11746 13 -     18194 ctcgca-----tatg-gct
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           5480 13 -     21137 ctcgca-----tatg-gct
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    4183 13 -     10723 ctcgca-----tatg-gct
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         3335 13 +      9834 ctcgca-----tatg-gct
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        21650 13 +     32220 ctcgca-----tatg-gct
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5935750 13 +   6242583 ctcgca-----tatg-gct
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        4998 13 +     20839 ctcgca-----tatg-gct
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2152225 13 +   4065304 cttcca-----cttg-gct
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     5538 13 -     10553 cttcca-----cttg-gct
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Varecia_rubra.k141_590885                                   8772 12 +     50397 tttcca-----tctg-gc-
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              8827 12 +     24756 tttcca-----tctg-gc-
i Varecia_variegata.k141_1128296                         C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        21507 13 -     24430 cttcct-----tttg-gct
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      11936  7 +     63895 -----------TTGT-TGT
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 1 I 277
e Otolemur_garnettii.GL873799.1                             692983 10 -   1103335 I
e Otolemur_crassicaudatus.k141_222918                          816 10 +      8798 I
e Galago_senegalensis.k141_631886                              981 10 +     11339 I
e Galago_moholi.ctg2040                                     423274 10 -    453645 I
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519  0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188  0 +      1777 C
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Loris_tardigradus.ctg83                                  1001514 10 +   6120653 I
e Loris_lydekkerianus.k141_2539221                            2677 10 +     11245 I
e Perodicticus_potto.k141_1092580                             5058 10 +     25941 I
e Perodicticus_ibeanus.k141_855320                            6685 10 +     13100 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zalophus_californianus.ZalCal_flattened_line_17732          2913 23 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                  8683 19 -     43706 I
e Vicugna_pacos.KN270157.1                                 5369665 27 -   5488506 I
e Ursus_maritimus.KK499267.1                               4848232 23 -   5085361 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383  9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   2809  0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    384971 25 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      116520 25 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 70244  0 +    116680 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                 8449 23 +     41958 I
e Sus_scrofa.JH118708.1                                      32994 27 -     47482 I
e Suricata_suricatta.SurSur_flattened_line_6629              16075 23 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             28514 21 +     97271 I
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                85637 14 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20272072 23 -  38429054 I
e Pteropus_vampyrus.KN525825.1                             1357734 14 +   4952924 I
e Pteropus_alecto.KB030862.1                              22974644 14 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         37987 23 +     42204 I
e Pteronotus_parnellii.KE909381.1                            12471 23 -     21811 I
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10411 23 -     78924 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Panthera_tigris.KE722367.1                               4718793 23 -   8748460 I
e Panthera_pardus.KV860321.1                                262157 23 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  148950 23 +    230217 I
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       460026 23 -    559221 I
e Oryctolagus_cuniculus.CM000791.1                        67144574 44 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              504357 23 -   2017862 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1360483  0 +   3988456 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105746918 10 + 199412804 I
e Nycticebus_coucang.k141_5327727                             4177 10 +      8486 I
e Nycticebus_bengalensis.LG01                            102576491 10 - 196305487 I
e Nyctereutes_procyonoides.CAJHUB010000658.1               9147271 23 -   9404916 I
e Noctilio_leporinus.NocLep_scaffold_251                    757664 25 +    783361 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186890  0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               298969 23 -  14710649 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   33181 23 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 139076 23 -    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         3051 23 -      8324 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mellivora_capensis.MelCap_flattened_line_69365              7788 23 +     13704 I
e Megaderma_lyra.MegLyr_scaffold_4542                         8178  0 -    207569 C
e Manis_pentadactyla.KN006162.1                              48618 19 -    317179 I
e Manis_javanica.JSZB01003497.1                              17233 19 +    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_8222                 88455  4 +     94391 I
e Lycaon_pictus.CM007581.1                                17953011 23 -  59628241 I
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3730 44 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3040214 23 +   3914936 I
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  42226 23 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_29171               41045  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       109621  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               240078 23 +    327341 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Galagoides_demidoff.k141_1959596                            4781 10 +      6795 I
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  7298 23 -     36744 I
e Felis_catus_fca126.CM031415.1                           20193786 23 + 205367284 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Equus_przewalskii.KK951119.1                               30918 27 +    498745 I
e Equus_caballus.CM000403.2                               18528903 27 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1281083 27 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16327080 23 -  41312741 I
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Eidolon_helvum.KE759718.1                                   8374  9 +     11740 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    3785 27 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  671030 26 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            61949  0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             26245 23 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_287352              1624  0 +      4208 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          11837  0 -     20389 C
e Condylura_cristata.JH655891.1                           17547132  5 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            171068  0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15969  0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            5641  0 -      6351 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634            204 27 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     90487 27 +    217609 I
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18498071 23 +  63665305 I
e Canis_lupus_familiaris.chr16                            17956771 23 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9032506 23 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    183120 23 -    185531 I
e CanFam4.chr16                                           17797063 23 -  60362399 I
e Camelus_ferus.KB017975.1                                  400905 27 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2332629 27 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10000165 27 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Arctocebus_calabarensis.k141_288239                        16452 10 +     17124 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Ailurus_fulgens.LNAC01001112.1                             77101 23 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9508326 23 -  29979442 I
e Acinonyx_jubatus.LLWD01001279.1                           825076 23 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       3462 20 +     62944 at--tcctgagctacattcatc
s Acinonyx_jubatus.LLWD01001279.1                           825099 12 -   1699592 ---------agttata-cctat
i Acinonyx_jubatus.LLWD01001279.1                        I 23 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     67737  7 +     87051 ---------------atccttt
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9508349 12 -  29979442 ---------agttata-ccttt
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 23 C 0
s Ailurus_fulgens.LNAC01001112.1                             77124 12 -    347723 ---------agttata-ccttt
i Ailurus_fulgens.LNAC01001112.1                         I 23 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     67641 20 -     89534 at--tccacactcacatacttt
i Allactaga_bullata.AllBul_scaffold_9566                 I 1040 C 0
s Allenopithecus_nigroviridis.k141_3361533                   11389 20 -     52922 ac--gcctaagctacactcttt
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         11323 20 -     28001 ac--tcctaagctacattcttt
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          1769 20 -     18505 ac--tcctaagctacattcttt
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           2618 20 -     12518 ac--tcctaagctacattcttt
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                               224 20 -     27731 at--tcctgagccatggctttc
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                 347 20 +      3134 at--tcctgagccatggctttc
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                                485 20 -     45847 at--tcctgagccacggctttc
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                21689 20 +     25266 at--tcctgagccacggctttc
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                            873 20 +      2906 at--tcctgagccacggctttc
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            14986 20 -     18578 at--tcctgagccacggctttc
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                               376 20 +     47717 at--tcctgagccatggctttc
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                              504 20 -      3544 at--tcctgagccacggctttc
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             11723 20 +     50774 at--tcctgagccacggctttc
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  12355 20 -     33861 at--tcctgagccacgtctttc
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            12376 20 -     34016 at--tcctgagccacgtctttc
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4294771 20 -   5030052 AT--CCCTGAGCCACGTCTTTC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             12377 20 -     34685 at--tcctgagccacgtctttc
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               25498 20 -     47192 at--tcctgagccacgtctttc
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       9005 20 +     20879 at--acctgagttgcttctttg
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        16462 13 +     17124 ---------acctatacccttc
i Arctocebus_calabarensis.k141_288239                    I 10 I 115
s Avahi_laniger.k141_765380                                  51035 19 -     92717 -t--tcctgagttgcatccttt
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              51664 19 +     85213 -t--tcctgagttgcatccttt
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             2120 20 -     10423 ct--tcctgagccacatctttc
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             21607 20 +     31915 at--tcctgaaccacatctttc
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            2087 19 +      5267 ct--tcctgagccacatctt-c
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23587299 20 - 189096842 CT--TCCTGAGCCACATCTTTC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              8831 19 -     12001 ct--tcctgagccacatc-ttc
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10000192 15 -  17673402 -------agttcctgttccttt
i Camelus_bactrianus.KN276810.1                          I 27 C 0
s Camelus_dromedarius.KN272107.1                           2332656 15 -   7040546 -------agttcctgttccttt
i Camelus_dromedarius.KN272107.1                         I 27 C 0
s Camelus_ferus.KB017975.1                                  400932 15 -   1652518 -------agttcctgttccttt
i Camelus_ferus.KB017975.1                               I 27 C 0
s CanFam4.chr16                                           17797086 12 -  60362399 ---------agttata-ccttt
i CanFam4.chr16                                          I 23 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    183143 12 -    185531 ---------agttata-ccttt
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 23 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9032529 12 -   9314153 ---------agttata-ccttt
i Canis_lupus_dingo.QKWQ01000480.1                       I 23 C 0
s Canis_lupus_familiaris.chr16                            17956794 12 -  59632846 ---------agttata-ccttt
i Canis_lupus_familiaris.chr16                           I 23 C 0
s Canis_lupus_orion.HG994398.1                            18498094 12 +  63665305 ---------agttata-ccttt
i Canis_lupus_orion.HG994398.1                           I 23 C 0
s Carlito_syrichta.NW_007259797.1                           153391 20 -    496798 GT--CCCTGTGTTGCATCCTTT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    135461 20 +    179628 at--tcctgggttgtgtccttt
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     90514 15 +    217609 -------agttcctgctccttt
i Catagonus_wagneri.CatWag_scaffold_2839                 I 27 C 0
s Cebuella_niveiventris.k141_1251222                          6740 20 -     11392 ct--tcctgagccacatctttc
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               2838 20 -      7577 ct--tcctgagccacatctttc
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         2890 20 +     31688 gt--ccctgtgttgcatccttt
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12229204  2 +  27778364 ---------ag-----------
i Ceratotherium_simum.JH767749.1                         I 27 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634            231  2 -     25243 ---------ag-----------
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 27 C 0
s Cercocebus_atys.KQ010504.1                               4472349 20 +   4669795 AC--TCCTAAGCTACATTCTTT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        10896 20 -     19203 ac--tcctaagctacattcttt
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           5318 20 +      8260 aa--tcctaagctacattcttt
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           5545 20 +     27781 ac--tcctaagctacattcttt
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         5700 20 -     20310 ac--tcctaagctacattcttt
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           8684 20 +     29689 ac--tcctaagctacattcttt
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            3112 20 +      9989 ac--tcctaagctacattcttt
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          11361 20 -     27936 ac--tcctaagctacattcttt
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                             233 20 -     17152 ac--tcctaagctacattcttt
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38813766 20 +  39242232 ac--tcctaagctacattcttt
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21219462 20 -  21565898 ac--tcctaagctacattcttt
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       36581 20 -     53127 ac--tcctaagctacattcttt
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        3867 20 +      7159 ac--tcctaagctacattcttt
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       11384 20 -     27947 ac--tcctaagctacattcttt
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         11357 20 +     17596 ac--tcctaagctacattcttt
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                           582 20 +     26000 ac--tcctaagctacattcttt
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             18462 19 -     52598 -t--tcctgagttgcatccttt
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           13812 19 +     57038 -t--tcctgcgttgcatccttt
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           7751 20 +     11226 at--tcctgagccacgtctttc
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18425322 20 -  18827391 ac--tcctaagctacattcttt
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       11763 20 -     50209 ac--tcctaagctacattcttt
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135418769 20 + 135778131 AC--TCCTAAGCTACATTCTTT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1907285 20 +   2368649 AC--TCCTAAGCTACATTCTTT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199946957 20 + 200372422 ac--tcctaagctacattcttt
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              33829 20 +     84244 ac--tcctaagctacattcttt
i Colobus_polykomos.k141_906115                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 47447  7 +     63868 ---------------acccttt
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11664780  7 + 224834208 ---------------atccttt
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             26268 12 -     87169 ---------agttata-cctac
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 23 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    834543 20 +   1526836 at--tcctgagttgtatcttct
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12534634 20 -  12879189 gt--tcctgagttgcatccttt
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  671056  2 +   1390856 ---------ag-----------
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 26 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    3812  2 +    198055 ---------ag-----------
i Diceros_bicornis.DicBicMic_scaffold_5955               I 27 C 0
s Ellobius_lutescens.LOEQ01008920.1                          16967  7 -    110024 ---------------gtctttt
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01109367.1                            3021  7 -      6299 ---------------atctttt
i Ellobius_talpinus.LOJH01109367.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16327103 12 -  41312741 ---------agttata-ccttt
i Enhydra_lutris.KZ291758.1                              I 23 C 0
s Equus_asinus.JREZ01000139.1                              1281110 13 +   4378816 ---------agttgtatccttt
i Equus_asinus.JREZ01000139.1                            I 27 C 0
s Equus_caballus.CM000403.2                               18528930 13 -  39960074 ---------agttgtatccttt
i Equus_caballus.CM000403.2                              I 27 C 0
s Equus_przewalskii.KK951119.1                               30945 13 +    498745 ---------agttgtatccttt
i Equus_przewalskii.KK951119.1                           I 27 C 0
s Erythrocebus_patas.Contig38                             21201964 20 -  21539334 ac--tcctaagctacattcttt
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              11146 19 -     14127 -t--tcctgagttgcatccttt
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                3844 19 -     16928 -t--tcctgagttgcatccttt
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              12877 19 -     25546 -t--tcctgagttgcatccttt
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            10062 19 +     26330 -t--tcctgagttgcatccttt
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 11310 19 +     23973 -t--tcctgagttgcatccttt
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                10062 19 +     75513 -t--tcctgagttgcatccttt
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  8013 19 +     97555 -t--tcctgagttgcatccttt
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            10941 19 +     26496 -t--tcctgagttgcatccttt
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  1546 19 -     17153 -t--tcctgagttgcatccttt
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              11122 19 +    111500 -t--tcctgagttgcatccttt
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20234965 12 + 206538554 ---------agttata-cctat
i Felis_catus.CM001381.2                                 I 23 C 0
s Felis_catus_fca126.CM031415.1                           20193809 12 + 205367284 ---------agttata-cctat
i Felis_catus_fca126.CM031415.1                          I 23 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  7321 12 -     36744 ---------agttata-cctat
i Felis_nigripes.FelNig_flattened_line_20823             I 23 C 0
s Galago_moholi.ctg2040                                     423284 13 -    453645 ---------acctatacccttc
i Galago_moholi.ctg2040                                  I 10 I 114
s Galago_senegalensis.k141_631886                              991 13 +     11339 ---------acctatacccttc
i Galago_senegalensis.k141_631886                        I 10 I 114
s Galagoides_demidoff.k141_1959596                            4791 13 +      6795 ---------acctatacccttc
i Galagoides_demidoff.k141_1959596                       I 10 I 114
s Galeopterus_variegatus.GalVar_scaffold_266699               1613 20 +      2098 gt--tcctgagttgcatccttt
i Galeopterus_variegatus.GalVar_scaffold_266699          C 0 C 0
s Gorilla_beringei.k141_3596273                              12696 20 -     32273 at--tcctgagctacattcttc
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186334844 20 + 186649187 at--tcctgagctacattcttc
i Gorilla_gorilla.LT578341.1                             I 13 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   31910 20 +     78134 ct--tcctgagtagcatccttt
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           4203 19 -     19426 -t--tcctgagttgcatccttt
i Hapalemur_alaotrensis.k141_170648                      C 0 I 24
s Hapalemur_gilberti.k141_488810                              9347 19 -     15286 -t--tcctgagttgcatccttt
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             10985 19 +     18253 -t--tcctgagttgcatccttt
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         11088 19 -     41752 -t--tcctgagttgcatccttt
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         10925 19 -     16460 -t--tcctgagttgcatccttt
i Hapalemur_occidentalis.k141_907772                     I 17 I 24
s Helogale_parvula.HelPar_flattened_line_2585               240101 12 +    327341 ---------agttata-cccac
i Helogale_parvula.HelPar_flattened_line_2585            I 23 C 0
s Hoolock_leuconedys.ctg274                                    431539 20 +    630532 at--tcctgagctacattcttc
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  42249 12 +     55795 ---------agttata-cctaa
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 23 I 10
s Hylobates_agilis.k141_307679                               14473 20 -     15490 at--tcctgagctacattcttc
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              56479 20 +     67168 at--tcctgagctacattcttc
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189540129 20 - 191637585 at--tcctgagctacatttttc
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3333023 20 -  11177569 at--tcctgagctacatttttc
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7517057 20 -   7955117 gt--ctctgaattccatctttt
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   19893 19 +     31101 -t--tcctgagttgcatccttt
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8273675 20 -   9596543 ga--tccacactcacatacttt
i Jaculus_jaculus.JH725527.1                             I 704 C 0
s Lemur_catta.scaffold_24                                 15521450 19 -  30322482 -t--tcctgagttgcatccttt
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        4521 20 +     64341 at--tcctgagccacgtctttc
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           1581 20 +      4941 at--tcctgagccacgtctttc
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4449 20 +     35603 at--tcctgagccacgtctttc
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    25877 20 +     38576 gt--tcctgagccatgtctttc
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         22574 20 +     66356 gt--tcctgagccatgtctttc
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          8344 19 -     23766 -t--tccttagttgcatccttt
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             26291 19 +     45836 -t--tccttagttgcatccttt
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_320948                           574 19 -      1719 -t--tcctgagtttcatccttt
i Lepilemur_ruficaudatus.k141_320948                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      24346 19 +     54090 -t--tccttagttgcatccttt
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3040237 12 +   3914936 ---------agttata-ccttt
i Leptonychotes_weddellii.KB714746.1                     I 23 C 0
s Lophocebus_aterrimus.ctg367                              1433894 20 +   1826925 ac--tcctaagctacattcttt
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            2687 13 +     11245 ---------acctatacccttc
i Loris_lydekkerianus.k141_2539221                       I 10 I 116
s Loris_tardigradus.ctg83                                  1001524 13 +   6120653 ---------acctatacccttc
i Loris_tardigradus.ctg83                                I 10 I 117
s Lycaon_pictus.CM007581.1                                17953034 12 -  59628241 ---------agttata-ccttt
i Lycaon_pictus.CM007581.1                               I 23 C 0
s Macaca_arctoides.k141_2326796                               3715 20 +     40492 ac--tcctaagctacattcttt
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59672969 20 +  60120075 ac--tcctaagctacattcttt
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  9471 20 -     26193 ac--tcctaagctacattcttt
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            77267 20 -    114318 ac--tcctaagctacattcttt
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  2982 20 -     23192 ac--tcctaagctacattcttt
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                12434 20 -     29190 ac--tcctaagctacattcttt
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  21002 20 +     37952 ac--tcctaagctacattcttt
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186836090 20 + 187317192 AC--TCCTAAGCTACATTCTTT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25454653 20 -  25927173 AC--TCCTAAGCTACATTCTTT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  76851 20 +     89720 ac--tcctaagctacattcttt
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 3848 20 +     20474 ac--tcctaagctacattcttt
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   3650 20 -     14993 ac--tcctaagctacattcttt
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  326520 20 -    668171 ac--tcctaagctacattcttt
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 1952 20 -     24072 ac--tcctaagctacattcttt
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               22589 20 -     45290 ac--tcctaagctacattcttt
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Manis_javanica.JSZB01003497.1                              17252  5 +    737560 -----------------ccttt
i Manis_javanica.JSZB01003497.1                          I 19 C 0
s Manis_pentadactyla.KN006162.1                              48637  5 -    317179 -----------------ccttt
i Manis_pentadactyla.KN006162.1                          I 19 C 0
s Mandrillus_leucophaeus.scaffold280                      23934137  6 -  24302211 ac--tcct--------------
i Mandrillus_leucophaeus.scaffold280                     C 0 I 2
s Mandrillus_sphinx.Contig270                               348313  6 +    752769 ac--tcct--------------
i Mandrillus_sphinx.Contig270                            C 0 I 2
s Marmota_marmota.CZRN01000018.1                          33099369 20 -  40650429 gt--ccttgaattccatctttt
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              7811 12 +     13704 ---------agttata-ccttt
i Mellivora_capensis.MelCap_flattened_line_69365         I 23 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 29345  7 +    140813 ---------------atccttt
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12179870  7 -  29670104 ---------------attcttt
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                2666 20 -      7380 ct--tcctgagccacatctttc
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               1736 20 +     18990 ct--tcctgagccacatctttc
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      2671 20 -      7356 ct--tcctgagccacatctttc
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18288836 19 -  93316391 -T--TTCTGAGTTGCATCCTTT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11257121  7 -  27267610 ---------------atctttt
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miopithecus_ogouensis.k141_534055                           5890 20 -     28506 ac--tcctaagctacattcttt
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         3074 12 -      8324 ---------agttata-ccttt
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 23 C 0
s Mirza_zaza.k141_952172                                      6406 18 -     37649 -t--tcctgagttgcatcctt-
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   33204 12 +     37127 ---------agttata-cccac
i Mungos_mungo.MunMun_flattened_line_23663               I 23 C 0
s Mus_caroli.LT608237.1                                   84358447  7 - 120012414 ---------------atccttt
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87647435  7 - 129401213 ---------------atccttt
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31351720  7 -  89631738 ---------------atccttt
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90749514  7 - 130317789 ---------------atccttt
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 139099  1 -    366855 -------a--------------
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 23 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              4164 20 +     14296 gt--tccagagtagcagttttt
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               298992 12 -  14710649 ---------agttata-ccttt
i Mustela_putorius.JH418006.1                            I 23 C 0
s Nasalis_larvatus.k141_413338                               11887 20 +     21681 ac--tcctaagctacattcttt
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9147294 12 -   9404916 ---------agttata-ccttt
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 23 C 0
s Nycticebus_bengalensis.LG01                            102576501 13 - 196305487 ---------acctatacccttc
i Nycticebus_bengalensis.LG01                            I 10 I 115
s Nycticebus_coucang.k141_5327727                             4187 13 +      8486 ---------acctatacccttc
i Nycticebus_coucang.k141_5327727                        I 10 I 115
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105746928 13 + 199412804 ---------acctatacccttc
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 10 I 115
s Odobenus_rosmarus.KB229312.1                              504380 12 -   2017862 ---------agttatt-ccttt
i Odobenus_rosmarus.KB229312.1                           I 23 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   21217  7 +     28053 ---------------gtctttt
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    76668  6 +    102263 ---------------ATT-ttt
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       460049 12 -    559221 ---------agttata-ccttt
i Otocyon_megalotis.JAEUCK010005147.1                    I 23 C 0
s Otolemur_crassicaudatus.k141_222918                          826  6 +      8798 ---------a-------ccttc
i Otolemur_crassicaudatus.k141_222918                    I 10 I 114
s Otolemur_garnettii.GL873799.1                             692993  6 -   1103335 ---------a-------ccttc
i Otolemur_garnettii.GL873799.1                          I 10 I 114
s Noctilio_leporinus.NocLep_scaffold_251                    757689  1 +    783361 -------t--------------
i Noctilio_leporinus.NocLep_scaffold_251                 I 25 C 0
s Pan_paniscus.KQ411613.1                                    40814 20 +     80009 AT--TCCTGAGCTACATTCTTC
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189139706 20 + 189151597 AT--TCCTGAGCTACATTCTTC
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  148973 12 +    230217 ---------ggttata-cctat
i Panthera_onca.PanOnc_flattened_line_3271               I 23 C 0
s Panthera_pardus.KV860321.1                                262180 12 +  18783137 ---------ggttata-cctat
i Panthera_pardus.KV860321.1                             I 23 C 0
s Panthera_tigris.KE722367.1                               4718816 12 -   8748460 ---------ggttata-cctat
i Panthera_tigris.KE722367.1                             I 23 C 0
s Papio_anubis.CM001495.2                                183439923 20 + 183742232 AC--TCCTAAGCTACATTCTTT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             3616 20 +     20448 ac--tcctaagctacattcttt
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20560421 20 +  20919399 ac--tcctaagctacattcttt
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   2359 20 +     41871 ac--tcctaagctacattcttt
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     5645 20 +     27711 ac--tcctaagctacattcttt
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  5724 20 +      9205 ac--tcctaagctacattcttt
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10434 12 -     78924 ---------agttata-cctat
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 23 C 0
s Perodicticus_ibeanus.k141_855320                            6695 13 +     13100 ---------acctatacccttc
i Perodicticus_ibeanus.k141_855320                       I 10 I 115
s Perodicticus_potto.k141_1092580                             5068 13 +     25941 ---------acctatacccttc
i Perodicticus_potto.k141_1092580                        I 10 I 115
s Peromyscus_maniculatus.KI615324.1                       18191267  7 -  18517816 ---------------atccttt
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Piliocolobus_badius.k141_1234363                           40401 20 +     62158 ac--tcctaagctacattcttt
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        35123 20 +     89929 at--tcctaagctacattcttt
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            36539 20 +     51399 at--tcctaagctacattcttt
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14292777 20 -  14605196 AT--TCCTAAGCTACATTCTTT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189127848 20 + 189387572 AT--TCCTTAGCTACATTCTTC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9567456 20 +   9816681 at--tccttagctacattcttc
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               70051 20 -     81375 ac--tcctaagctacattcttt
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              1871 20 +     19060 ac--tcctaagctacattcttt
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2594101 19 -   4620579 -T--TCCCGAGTTGCATCCTTT
i Prolemur_simus.MPIZ01000396.1                          I 28 C 0
s Propithecus_coquerelli.NW_012148875.1                     988091 19 +   2598838 -T--TCCTGAGTTGCATCCTTT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          26402 19 +     38485 -t--tcctgagttgcatccttt
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             2561 19 +      4256 -t--tcctgagttgcatccttt
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          23921 19 +     35766 -t--tcctgagttgcatccttt
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           2103 19 -     24134 -t--tcctgagttgcatccttt
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        25916 19 -     67325 -t--tcctgagttgcatccttt
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           2154 19 -      6182 -t--tcctgagttgcatccttt
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             6996  7 -     21651 ---------------atccttt
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         38010 12 +     42204 ---------agttata-ccttt
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 23 C 0
s Puma_concolor.QAVW01001104.1                            20272095 12 -  38429054 ---------agttata-cctat
i Puma_concolor.QAVW01001104.1                           I 23 C 0
s Pteronotus_parnellii.KE909381.1                            12494  1 -     21811 -------a--------------
i Pteronotus_parnellii.KE909381.1                        I 23 C 0
s Pygathrix_cinerea.k141_1153803                             11883 20 -     91421 ac--tcctaagctacattcttt
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7606011 20 +   7812017 ac--tcctaagctacattcttt
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11859 20 -     72585 ac--tcctaagctacattcttt
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53567529  7 +  90668790 ---------------GCccttt
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             3566 20 -     11128 ac--tcctaagctacattcttt
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91232921 20 - 195417433 AC--TCCTAAGCTACATTCTTT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7668570 20 +   7961872 ac--tcctaagctacattcttt
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_2619299                               4776 20 -      8359 at--tcctgagccacgtctttc
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            11085 19 -     13588 at--tcctgag-cacgtctgtc
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              4722 20 -      6207 at--tcctgagccacgtctttc
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               10449 20 +     13640 at--tcctgagccacatctttc
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               5312 20 +      8564 at--tcctgagccacgtctttc
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209465589 20 + 209938924 at--tcctgagccacgtctttc
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 4802 20 -      9399 at--tcctgagccacgtctttc
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 1950 19 +      3421 at--tcctgag-cacgtctgtc
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119948134 20 - 121099817 AT--TCCTGAGCCACGTCTTTC
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       20601 20 +     46362 ac--tcctgagccacgtctttc
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               20696 20 +     45824 at--tcctgagccacgtctttc
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             37311 20 -     64574 at--tcctgagccacgtctttc
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                                317 20 -     23631 at--tcctgagccacgtctttc
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 20589 20 -     61129 ac--tcctgagccacgtctttc
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          16394 20 -     19888 ac--tcctaagctacattcttt
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      23596 20 +     39453 ac--tcctaagctacattcttt
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            4122 20 +     27826 ac--tcctaagctacattcttt
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             3643 20 -     19483 ac--tcctaagctacattcttt
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      3705 20 +      7198 ac--tcctaagctacattcttt
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         11965 20 +     15514 ac--tcctaagctacattcttt
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    10690  7 -     12148 ---------------attcttt
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               1633 14 +   1910179 --------cagttgtatctctt
i Solenodon_paradoxus.SolPar_flattened_line_126          N 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1950141 20 -   3870691 gt--ccctaaattccatcattt
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             28535 12 +     97271 ---------agttata-ccttt
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 21 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              16098 12 -    196729 ---------agttata-cccac
i Suricata_suricatta.SurSur_flattened_line_6629          I 23 C 0
s Sus_scrofa.JH118708.1                                      33021 15 -     47482 -------agttcctgttccttt
i Sus_scrofa.JH118708.1                                  I 27 C 0
s Symphalangus_syndactylus.tarseq_199                      1090171 20 -   1523678 gt--tcctgagctacattcttc
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      116545  2 -    156842 ---------ag-----------
i Tapirus_indicus.TapInd_scaffold_9301                   I 25 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    384996  2 +    539355 ---------ag-----------
i Tapirus_terrestris.TapTer_scaffold_755                 I 25 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 8472  1 +     41958 -------a--------------
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 23 C 0
s Tarsius_lariang.k141_2201908                               23495 20 +     70052 gt--tcttgtgttgcatccttt
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_2029956                               2840 20 +      4644 gt--tcttgtgttgcatccttt
i Tarsius_wallacei.k141_2029956                          C 0 C 0
s Theropithecus_gelada.CM009954.1                        186425288 20 + 186847797 AC--TCCTAAGCTACATTCTTT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          7695 20 -     20410 ac--tcctaagctacattcttt
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    11890 20 +     15221 ac--tcctaagctacattcttt
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        7796 20 +     19930 ac--tcctaagctacattcttt
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       4226 20 -     19997 ac--tcctaagctacattcttt
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            44346 20 -     60166 ac--tcctaagctacattcttt
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        11817 20 -     27529 ac--tcctaagctacattcttt
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     11759 20 -     18194 ac--tcctaagctacattcttt
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           5493 20 -     21137 ac--tcctaagctacattcttt
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    4196 20 -     10723 ac--tcctaagctacattcttt
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         3348 20 +      9834 ac--tcctaagctacattcttt
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        21663 20 +     32220 ac--tcctaagctacattcttt
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5935763 20 +   6242583 ac--tcctaagctacattcttt
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        5011 20 +     20839 ac--tcctaagctacattcttt
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2152238 20 +   4065304 gc--tctgacgtcgtatccttt
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     5551 20 -     10553 gc--tctaacatcgtatccttt
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4848255 12 -   5085361 ---------agttata-ccttt
i Ursus_maritimus.KK499267.1                             I 23 C 0
s Varecia_rubra.k141_590885                                   8784 19 +     50397 -t--tcctaagttgcatacttt
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              8839 18 +     24756 -t--tccta-gttgcatacttt
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5369692 15 -   5488506 -------agttcctgttccttt
i Vicugna_pacos.KN270157.1                               I 27 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  8702 12 -     43706 ---------agttata-ccttt
i Vulpes_lagopus.VulLag_flattened_line_30954             I 19 C 0
s Xerus_inauris.XerIna_scaffold_48378                        21520 20 -     24430 gt--ccctgaattgtatctttt
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          2936 12 +     86975 ---------agttatt-ccttt
i Zalophus_californianus.ZalCal_flattened_line_17732     I 23 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      12220 20 +     63895 gt--tcctcatttgaatacttt
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 277 C 0
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519  0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188  0 +      1777 C
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383  9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   2809  0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 70244  0 +    116680 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                85637 14 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Pteropus_vampyrus.KN525825.1                             1357734 14 +   4952924 I
e Pteropus_alecto.KB030862.1                              22974644 14 +  28871421 I
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Oryctolagus_cuniculus.CM000791.1                        67144574 44 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1360483  0 +   3988456 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186890  0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Megaderma_lyra.MegLyr_scaffold_4542                         8178  0 -    207569 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 88455  4 +     94391 I
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3730 44 -     14121 I
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_29171               41045  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       109621  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Eidolon_helvum.KE759718.1                                   8374  9 +     11740 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            61949  0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Crocidura_indochinensis.CroInd_scaffold_287352              1624  0 +      4208 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          11837  0 -     20389 C
e Condylura_cristata.JH655891.1                           17547132  5 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            171068  0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15969  0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            5641  0 -      6351 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       3482 26 +     62944 a-------------t------------ag--taaaccaatca---t----a------GT-----A---A---GT----A--------AT
s Acinonyx_jubatus.LLWD01001279.1                           825111 26 -   1699592 a-------------t------------aa--taaa-t--cag---t----a------atca-t-g---a---gt----g--------aa
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     67744 20 +     87051 a-------------t------------aa--caaa-a--tga---cac--a------at-----c---a--------------------
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9508361 24 -  29979442 a-------------t------------aa--taaa-c--cag---t----a------atgg-t-g---a---gt----a----------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 2
s Ailurus_fulgens.LNAC01001112.1                             77136 33 -    347723 a-------------t------------aa--aaaa-g--tgg---t----a------at-agt-g---a---gt----attttcct-ga
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     67661 21 -     89534 a-------------t------------aa--tcaa-a--tta---ta-atg------gt-----a---a--------------------
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   11409 26 -     52922 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gc----a--------at
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         11343 26 -     28001 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          1789 26 -     18505 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           2638 26 -     12518 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                               244 16 -     27731 a-------------g------------ag--taaaccaatac---t-------------------------------------------
i Alouatta_belzebul.k141_3238538                         C 0 I 10
s Alouatta_caraya.k141_1743867                                 367 16 +      3134 a-------------g------------ag--taaaccaatac---t-------------------------------------------
i Alouatta_caraya.k141_1743867                           C 0 I 10
s Alouatta_discolor.k141_743489                                505 16 -     45847 a-------------g------------ag--taaaccaatac---t-------------------------------------------
i Alouatta_discolor.k141_743489                          C 0 I 10
s Alouatta_juara.k141_1509701                                21709 16 +     25266 a-------------g------------ag--taaaccaatac---t-------------------------------------------
i Alouatta_juara.k141_1509701                            C 0 I 10
s Alouatta_macconnelli.k141_1406484                            893 16 +      2906 a-------------g------------ag--taaaccaatac---t-------------------------------------------
i Alouatta_macconnelli.k141_1406484                      C 0 I 10
s Alouatta_nigerrima.k141_3472759                            15006 16 -     18578 a-------------g------------ag--taaaccaatac---t-------------------------------------------
i Alouatta_nigerrima.k141_3472759                        C 0 I 10
s Alouatta_palliata.k141_2135620                               396 16 +     47717 a-------------g------------ag--taaaccaatac---t-------------------------------------------
i Alouatta_palliata.k141_2135620                         C 0 I 10
s Alouatta_puruensis.k141_1253230                              524 16 -      3544 a-------------g------------ag--taaaccaatac---t-------------------------------------------
i Alouatta_puruensis.k141_1253230                        C 0 I 10
s Alouatta_seniculus.k141_117119                             11743 16 +     50774 a-------------g------------ag--taaaccaatac---t-------------------------------------------
i Alouatta_seniculus.k141_117119                         C 0 I 10
s Aotus_azarae.k141_3104676                                  12375 16 -     33861 a-------------g------------ag--taaaccaatac---t-------------------------------------------
i Aotus_azarae.k141_3104676                              C 0 I 6
s Aotus_griseimembra.k141_2240599                            12396 16 -     34016 a-------------g------------ag--taaaccaatac---t-------------------------------------------
i Aotus_griseimembra.k141_2240599                        C 0 I 6
s Aotus_nancymaae.KZ198451.1                               4294791 16 -   5030052 A-------------G------------AG--TAAACCAATAC---T-------------------------------------------
i Aotus_nancymaae.KZ198451.1                             C 0 I 6
s Aotus_trivirgatus.k141_2152450                             12397 16 -     34685 a-------------g------------ag--taaaccaatac---t-------------------------------------------
i Aotus_trivirgatus.k141_2152450                         C 0 I 6
s Aotus_vociferans.k141_344750                               25518 16 -     47192 a-------------g------------ag--taaaccaatac---t-------------------------------------------
i Aotus_vociferans.k141_344750                           C 0 I 6
s Aplodontia_rufa.AprRuf_scaffold_68852                       9025 18 +     20879 a-------------t------------at--tcaa-t--caa---ta-gta------g-------------------------------
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        16590 25 +     17124 a-------------t------------aa--ggac-cagtaa---c----a------gc-----a---a---gt----g--------aa
i Arctocebus_calabarensis.k141_288239                    I 115 C 0
s Avahi_laniger.k141_765380                                  51054 24 -     92717 a-------------c------------a---taaa-cagtaa---t----a------gt-----a---a---gt----g--------aa
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              51683 24 +     85213 a-------------c------------a---taaa-cagtaa---t----a------gt-----a---a---gt----g--------aa
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             2140 16 -     10423 a-------------g------------ag--taaaccaatac---t-------------------------------------------
i Callibella_humilis.k141_1278103                        C 0 I 6
s Callimico_goeldii.k141_1091182                             21627 16 +     31915 a-------------g------------ag--taaaccaatac---t-------------------------------------------
i Callimico_goeldii.k141_1091182                         C 0 I 10
s Callithrix_geoffroyi.k119_512088                            2106 16 +      5267 a-------------g------------ag--taaaccaatac---t-------------------------------------------
i Callithrix_geoffroyi.k119_512088                       C 0 I 10
s Callithrix_jacchus.pat_scaffold_3                       23587319 16 - 189096842 A-------------G------------AG--TAAACCAATAC---T-------------------------------------------
i Callithrix_jacchus.pat_scaffold_3                      C 0 I 10
s Callithrix_kuhlii.k119_1164682                              8850 16 -     12001 a-------------g------------ag--taaaccaatac---t-------------------------------------------
i Callithrix_kuhlii.k119_1164682                         C 0 I 10
s Camelus_bactrianus.KN276810.1                           10000207 26 -  17673402 a-------------t------------aa--taaa-c--cag---t----a------at-----aatga---gt----g--------aa
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2332671 26 -   7040546 a-------------t------------aa--taaa-c--cag---t----a------at-----aatga---gt----g--------aa
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  400947 26 -   1652518 a-------------t------------aa--taaa-c--cag---t----a------at-----aatga---gt----g--------aa
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17797098 33 -  60362399 a-------------t------------aa--taaa-t--cag---g----a------gt-agt-g---a---gt----attttc-tgga
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    183155 33 -    185531 a-------------t------------aa--taaa-t--cag---g----a------gt-agt-g---a---gt----attttc-tgga
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9032541 33 -   9314153 a-------------t------------aa--taaa-t--cag---g----a------gt-agt-g---a---gt----attttc-tgga
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17956806 33 -  59632846 a-------------t------------aa--taaa-t--cag---g----a------gt-agt-g---a---gt----attttc-tgga
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18498106 33 +  63665305 a-------------t------------aa--taaa-t--cag---g----a------gt-agt-g---a---gt----attttc-tgga
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           153411 26 -    496798 A-------------T------------AA--TAAGctggaaa---t----a------tt-----a---a---at----a--------aa
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    135481 18 +    179628 c-------------t------------aa--tatg----tgg---ta-ata------at------------------------------
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 14
s Catagonus_wagneri.CatWag_scaffold_2839                     90529 29 +    217609 a-------------t------------aa--taaa-c--caa---t----aataataat-----a---a---gt----a--------aa
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          6760 16 -     11392 a-------------g------------ag--taaaccaatac---t-------------------------------------------
i Cebuella_niveiventris.k141_1251222                     C 0 I 10
s Cebuella_pygmaea.k141_1309012                               2858 16 -      7577 a-------------g------------ag--taaaccaatac---t-------------------------------------------
i Cebuella_pygmaea.k141_1309012                          C 0 I 10
s Cephalopachus_bancanus.k141_1423433                         2910 26 +     31688 a-------------t------------aa--taagctggaaa---t----a------tt-----a---a---at----a--------aa
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12229206 37 +  27778364 --------------ttgtgtcctttacaa--taag-c--cag---t----a------at-agt-a---a---gt----a--------aa
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634            233 37 -     25243 --------------ttgtgtcctttacaa--taag-c--cag---t----a------at-agt-a---a---gt----a--------aa
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4472369 26 +   4669795 A-------------T------------AG--TAAACCAATCA---T----A------GT-----A---A---GT----A--------AT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        10916 26 -     19203 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           5338 26 +      8260 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           5565 26 +     27781 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         5720 26 -     20310 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------ac
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           8704 26 +     29689 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------ac
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            3132 26 +      9989 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          11381 26 -     27936 a-------------t------------ag--taaaccaatcg---t----a------gt-----a---a---gt----a--------at
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                             253 26 -     17152 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38813786 26 +  39242232 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21219482 26 -  21565898 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       36601 26 -     53127 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        3887 26 +      7159 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       11404 26 -     27947 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------ac
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         11377 26 +     17596 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                           602 26 +     26000 a-------------t------------ag--taaacaaatca---t----a------gt-----a---a---gt----a--------at
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             18481 24 -     52598 a-------------t------------a---taaa-cagtaa---t----a------gt-----a---a---at----g--------aa
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           13831 24 +     57038 a-------------t------------a---caaa-cagtaa---t----a------gt-----a---a---gt----t--------aa
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           7771 16 +     11226 a-------------g------------ag--taaaccaatac---t-------------------------------------------
i Chiropotes_albinasus.k141_2813271                      C 0 I 10
s Chlorocebus_aethiops.ctg25                              18425342 26 -  18827391 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       11783 26 -     50209 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135418789 26 + 135778131 A-------------T------------AG--TAAACCAATCA---T----A------GT-----A---A---GT----A--------AT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1907305 26 +   2368649 A-------------T------------AG--TAAACCAATCA---T----A------GT-----A---A---GT----C--------AT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199946977 26 + 200372422 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              33849 26 +     84244 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Colobus_polykomos.k141_906115                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 47454 20 +     63868 a-------------t------------aa--tgaa-a--tga---ttc--a------gt-----g---a--------------------
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11664787 20 + 224834208 a-------------t------------ta--taaa-a--tca---aac--a------at-----a---a--------------------
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             26280 26 -     87169 a-------------t------------aa--taaa-c--cag---t----a------at-agt-g---a---gt----c--------aa
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    834563  9 +   1526836 a-------------t------------aa--taag-c----------------------------------------------------
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 22
s Daubentonia_madagascariensis.ctg71                      12534654 25 -  12879189 a-------------t------------aa--taaa-cagtaa---t----a------gt-----a---a---gt----g--------aa
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  671058 37 +   1390856 --------------ttgtgtcctttacaa--taag-c--cag---t----a------at-agt-a---a---gt----a--------aa
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    3814 37 +    198055 --------------ttgtgtcctttacaa--taag-c--cag---t----a------at-agt-a---a---gt----a--------aa
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          16974 19 -    110024 a-------------t------------aa--taaa-a--aga---tac--a------ga-----a------------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01109367.1                            3028 19 -      6299 a-------------t------------aa--taaa-a--aga---tac--a------ga-----a------------------------
i Ellobius_talpinus.LOJH01109367.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16327115 33 -  41312741 a-------------c------------aa--taaa-g--tgg---c----a------at-agt-g---a---gt----attttcct-ga
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1281123 26 +   4378816 a-------------t------------aa--taag-c--aac---t----g------at-agt-a---a---gt----a--------aa
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18528943 26 -  39960074 a-------------t------------aa--taag-c--aac---t----g------at-agt-a---a---gt----a--------aa
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               30958 26 +    498745 a-------------t------------aa--taag-c--aac---t----g------at-agt-a---a---gt----a--------aa
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21201984 26 -  21539334 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              11165 24 -     14127 a-------------t------------a---taaa-cagtaa---t----a------gt-----a---a---gt----g--------aa
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                3863 24 -     16928 a-------------t------------a---taaa-cagtaa---t----a------gt-----a---a---gt----g--------aa
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              12896 24 -     25546 a-------------t------------a---taaa-caataa---t----a------gt-----a---a---gt----g--------aa
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            10081 24 +     26330 a-------------t------------a---taaa-cagtaa---t----a------gt-----a---a---gt----g--------aa
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 11329 24 +     23973 a-------------t------------a---taaa-cagtaa---t----a------gt-----a---a---gt----g--------aa
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                10081 24 +     75513 a-------------t------------a---taaa-cagtaa---t----a------gt-----a---a---gt----g--------aa
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  8032 24 +     97555 a-------------t------------a---taaa-cagtaa---t----a------gt-----a---a---gt----g--------aa
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            10960 24 +     26496 a-------------t------------a---taaa-cagtaa---t----a------gt-----a---a---gt----g--------aa
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  1565 24 -     17153 a-------------t------------a---taaa-cagtaa---t----a------gt-----a---a---gt----g--------aa
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              11141 24 +    111500 a-------------t------------a---taaa-cagtaa---t----a------gt-----a---a---at----g--------aa
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20234977 26 + 206538554 a-------------t------------aa--taaa-t--cag---t----a------atca-t-g---a---gt----g--------aa
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20193821 26 + 205367284 a-------------t------------aa--taaa-t--cag---t----a------atca-t-g---a---gt----g--------aa
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  7333 26 -     36744 a-------------t------------aa--taaa-t--cag---t----a------atca-t-g---a---gt----g--------aa
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     423411 25 -    453645 g-------------t------------aa--ggac-cagtaa---t----a------gc-----a---a---gt----g--------aa
i Galago_moholi.ctg2040                                  I 114 C 0
s Galago_senegalensis.k141_631886                             1118 25 +     11339 g-------------t------------aa--ggac-cagtaa---t----a------gc-----a---a---gt----g--------aa
i Galago_senegalensis.k141_631886                        I 114 C 0
s Galagoides_demidoff.k141_1959596                            4918 25 +      6795 g-------------t------------aa--ggac-cagtaa---t----a------gc-----a---a---gt----g--------aa
i Galagoides_demidoff.k141_1959596                       I 114 C 0
s Galeopterus_variegatus.GalVar_scaffold_266699               1633 23 +      2098 a-------------t------------ag--taaa-c--tgg---t----a------ac-----a---a---at----a--------at
i Galeopterus_variegatus.GalVar_scaffold_266699          C 0 C 0
s Gorilla_beringei.k141_3596273                              12716 26 -     32273 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186334864 26 + 186649187 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   31930 22 +     78134 a-------------t------------aa--taag-c--cag---ta-aca------gt-----t---a---a----------------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 13
s Hapalemur_alaotrensis.k141_1720546                         43051 26 +     55949 a-------------t------------a-atcaac-cagtaa---a----a------gt-----a---a---gt----a--------aa
i Hapalemur_alaotrensis.k141_1720546                     I 33 I 145
s Hapalemur_gilberti.k141_488810                              9366 24 -     15286 a-------------t------------a---taaa-cagtaa---t----a------gt-----a---a---gt----g--------aa
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             11004 24 +     18253 a-------------t------------a---taaa-cagtaa---t----a------gt-----a---a---gt----g--------aa
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         11107 24 -     41752 a-------------t------------a---taaa-cagtaa---t----a------gt-----a---a---gt----g--------aa
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_380049                         31842 26 -     62596 a-------------t------------a-atcaac-cagtaa---a----a------gt-----a---a---gt----a--------aa
i Hapalemur_occidentalis.k141_380049                     I 21 I 145
s Helogale_parvula.HelPar_flattened_line_2585               240113 26 +    327341 a-------------t------------aa--tcaa-c--cag---c----a------ac-agt-g---a---gt----c--------aa
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hoolock_leuconedys.ctg274                                    431559 26 +    630532 a-------------t------------ag--taaaccaatca---c----a------gt-----a---a---gt----a--------at
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  42271 13 +     55795 --------------------------------------------------t------at-agt-g---g---gt----a--------aa
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 10 C 0
s Hylobates_agilis.k141_307679                               14493 26 -     15490 a-------------t------------ag--taaaccaatca---c----a------gt-----g---a---gt----a--------at
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              56499 26 +     67168 a-------------t------------ag--taaaccaatca---c----a------gt-----g---a---gt----a--------at
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189540149 26 - 191637585 a-------------t------------ag--taaaccaatca---c----a------gt-----g---a---gt----a--------at
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3333043 26 -  11177569 a-------------t------------ag--taaaccaatca---c----a------gt-----g---a---gt----a--------at
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7517077 18 -   7955117 a-------------t------------ga--taaa-a--cag---t-tata------g-------------------------------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   19912 23 +     31101 a-------------c------------g---taaa--agtaa---t----a------ga-----a---a---gt----g--------aa
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8273695 21 -   9596543 a-------------t------------aa--tcaa-a--tga---ta-atg------gt-----a---a--------------------
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lemur_catta.scaffold_24                                 15521469 24 -  30322482 a-------------t------------a---taaa-cagtaa---t----a------gt-----a---a---gt----g--------aa
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        4541 16 +     64341 a-------------g------------ag--taaaccaatac---t-------------------------------------------
i Leontocebus_fuscicollis.k141_1820339                   C 0 I 10
s Leontocebus_illigeri.k141_3350179                           1601 16 +      4941 a-------------g------------ag--taaaccaatac---t-------------------------------------------
i Leontocebus_illigeri.k141_3350179                      C 0 I 10
s Leontocebus_nigricollis.k141_4610752                        4469 16 +     35603 a-------------g------------ag--taaaccaatac---t-------------------------------------------
i Leontocebus_nigricollis.k141_4610752                   C 0 I 10
s Leontopithecus_chrysomelas.k141_1519602                    25897 16 +     38576 a-------------g------------ag--taaaccaatac---t-------------------------------------------
i Leontopithecus_chrysomelas.k141_1519602                C 0 I 10
s Leontopithecus_rosalia.k141_464620                         22594 16 +     66356 a-------------g------------ag--taaaccaatac---t-------------------------------------------
i Leontopithecus_rosalia.k141_464620                     C 0 I 10
s Lepilemur_ankaranensis.k141_596936                          8363 18 -     23766 a-------------t------------a---taaa----------t----a------gt-----a---a---gt----g--------aa
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             26310 18 +     45836 a-------------t------------a---taaa----------t----a------gt-----a---a---gt----g--------aa
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_320948                           593 11 -      1719 a-------------t------------a---taaa-cgg--g-----------------------------------------------
i Lepilemur_ruficaudatus.k141_320948                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      24365 18 +     54090 a-------------t------------a---taaa----------t----a------gt-----a---a---gt----g--------aa
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3040249 33 +   3914936 t-------------t------------aa--taaa-c--cag---t----a------ataa-t-g---a---gt----atttccct-ga
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                              1433914 26 +   1826925 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            2816 25 +     11245 g-------------t------------aa--ggac-cagtaa---t----a------gc-----a---a---gt----g--------aa
i Loris_lydekkerianus.k141_2539221                       I 116 C 0
s Loris_tardigradus.ctg83                                  1001654 25 +   6120653 g-------------t------------aa--ggac-cagtaa---t----a------gc-----a---a---gt----g--------aa
i Loris_tardigradus.ctg83                                I 117 C 0
s Lycaon_pictus.CM007581.1                                17953046 33 -  59628241 a-------------t------------aa--taaa-t--cag---g----a------gt-agt-g---a---gt----attttc-tgga
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               3735 26 +     40492 a-------------t------------ag--taaaccaatta---t----a------gt-----a---a---gt----a--------at
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59672989 26 +  60120075 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  9491 26 -     26193 a-------------t------------ag--taaaccaatta---t----a------gt-----a---a---gt----a--------at
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            77287 26 -    114318 a-------------t------------ag--taaaccaatta---t----a------gt-----a---a---gt----a--------at
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  3002 26 -     23192 a-------------t------------ag--taaaccaatta---t----a------gt-----a---a---gt----a--------at
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                12454 26 -     29190 a-------------t------------ag--taaaccaatta---t----a------gt-----a---a---gt----a--------at
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  21022 26 +     37952 a-------------t------------ag--taaaccaatta---t----a------gt-----a---a---gt----a--------at
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186836110 26 + 187317192 A-------------T------------AG--TAAACCAATTA---T----A------GT-----A---A---GT----A--------AT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25454673 26 -  25927173 A-------------T------------AG--TAAACCAATTA---T----A------GT-----A---A---GT----A--------AT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  76871 26 +     89720 a-------------t------------ag--taaaccaatta---t----a------gt-----a---a---gt----a--------at
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 3868 26 +     20474 a-------------t------------ag--taaaccaatta---t----a------gt-----a---a---gt----a--------at
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   3670 26 -     14993 a-------------t------------ag--taaaccaatta---t----a------gt-----a---a---gt----a--------at
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  326540 26 -    668171 a-------------t------------ag--taaaccaatta---t----a------gt-----a---a---gt----a--------at
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 1972 26 -     24072 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               22609 26 -     45290 a-------------t------------ag--taaaccaatta---t----a------gt-----a---a---gt----a--------at
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23934145 26 -  24302211 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Mandrillus_leucophaeus.scaffold280                     I 2 I 43
s Mandrillus_sphinx.Contig270                               348321 26 +    752769 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Mandrillus_sphinx.Contig270                            I 2 C 0
s Manis_javanica.JSZB01003497.1                              17257 26 +    737560 g-------------t------------aa--tgaa-c--caa---g----a------ataa-t-a---a---gt----a--------aa
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              48642 26 -    317179 g-------------t------------aa--tgaa-c--cag---t----a------ataa-t-a---a---gt----a--------aa
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33099389 18 -  40650429 a-------------t------------ga--taaa-a--cag---t-tgta------g-------------------------------
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              7823 33 +     13704 a-------------t------------aa--taaa-g--tag---c----a------at-agt-g---a---gt----attttcct-ga
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 29352 21 +    140813 a-------------t------------aa--taaa-g--taa---ttc--a------gc-----aa--a--------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12179877 20 -  29670104 a-------------t------------ta--taaa-a--tca---aac--a------at-----a---a--------------------
i Mesocricetus_auratus.KB708134.1                        C 0 I 14
s Mico_argentatus.k141_1239457                                2686 16 -      7380 a-------------g------------ag--taaaccaatac---t-------------------------------------------
i Mico_argentatus.k141_1239457                           C 0 I 6
s Mico_humeralifer.k141_1976199                               1756 16 +     18990 a-------------g------------ag--taaaccaatac---t-------------------------------------------
i Mico_humeralifer.k141_1976199                          C 0 I 6
s Mico_schneideri.k141_1950671                                      2691 16 -      7356 a-------------g------------ag--taaaccaatac---t-------------------------------------------
i Mico_schneideri.k141_1950671                                 C 0 I 6
s Microcebus_murinus.CM007674.1                           18288855 18 -  93316391 A-------------T------------G---TAAA-CAGTAA---T----A------GC-----A------------------------
i Microcebus_murinus.CM007674.1                          C 0 I 6
s Microtus_ochrogaster.CM001695.1                         11257128 19 -  27267610 a-------------t------------aa--taaa-a--aga---tac--a------gt-----a------------------------
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miopithecus_ogouensis.k141_534055                           5910 26 -     28506 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         3086 33 -      8324 t-------------t------------aa--taaa-c--cag---t----a------ataa-t-g---a---gt----atttccct-ga
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      6424 24 -     37649 a-------------c------------g---taaa-tagtaa---t----a------gt-----a---a---gt----a--------aa
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 139100 35 -    366855 gttttatcct-ttct------------aa--taaa-c--cac---t----a------at-----c---a---at----a--------ac
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   33216 26 +     37127 a-------------t------------aa--tcaa-c--cag---c----a------ac-agt-g---a---gt----c--------aa
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Mus_caroli.LT608237.1                                   84358454 20 - 120012414 a-------------t------------aa--caaa-a--gga---tac--a------gt-----a---a--------------------
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87647442 20 - 129401213 a-------------t------------aa--taaa-a--tga---tac--a------gt-----a---a--------------------
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31351727 20 -  89631738 a-------------t------------aa--taaa-a--tga---tac--a------gt-----g---a--------------------
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90749521 20 - 130317789 a-------------t------------aa--taaa-a--tga---tac--a------gt-----a---a--------------------
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              4184 22 +     14296 g-------------t------------ga--taaa-c--cag---ta-aca------at-----a---a---a----------------
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 13
s Mustela_putorius.JH418006.1                               299004 33 -  14710649 a-------------c------------aa--taaa-g--tgg---c----a------at-agt-g---a---gt----attttcct-ga
i Mustela_putorius.JH418006.1                            C 0 C 0
s Nasalis_larvatus.k141_413338                               11907 26 +     21681 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    757690 35 +    783361 gttttatc-tgttct------------aa--taaa-c--cag---t----a------at-----a---a---gt----a--------ac
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9147306 33 -   9404916 a-------------t------------aa--taaa-t--cag---g----a------gt-agt-g---a---gt----attttc-tgga
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102576629 24 - 196305487 a-------------t------------aa--ggac-cagtaa---t----a-------c-----a---a---gt----g--------aa
i Nycticebus_bengalensis.LG01                            I 115 C 0
s Nycticebus_coucang.k141_5327727                             4315 24 +      8486 a-------------t------------aa--ggac-cagtaa---t----a-------c-----a---a---gt----g--------aa
i Nycticebus_coucang.k141_5327727                        I 115 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105747056 25 + 199412804 g-------------t------------aa--ggac-cagtaa---t----a------gc-----a---a---gt----g--------aa
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 115 C 0
s Ochotona_princeps.JH802162.1                             1360483 21 +   3988456 --------------T------------TG--TAAG-A--T-G---t----g------gt-----a---a---at----a--------aa
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              504392 33 -   2017862 a-------------t------------aa--taaa-c--cag---t----a------at-agt-g---a---gt----atttccct-ga
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   21224 19 +     28053 a-------------t------------aa--taaa-g--aga---tac--a------gt-----a------------------------
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    76674 22 +    102263 a-------------t------------aa--taaa-a--gga---tacaca------gt-----a---a--------------------
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       460061 33 -    559221 a-------------t------------aa--taaa-t--cag---g----a------gt-agt-g---a---gt----attttc-tgga
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                          946 25 +      8798 G-------------T------------aa--ggac-cagtaa---t----a------gc-----a---a---gt----g--------aa
i Otolemur_crassicaudatus.k141_222918                    I 114 C 0
s Otolemur_garnettii.GL873799.1                             693113 25 -   1103335 G-------------T------------AA--GGAC-CAGTAA---T----A------GC-----A---A---GT----G--------AA
i Otolemur_garnettii.GL873799.1                          I 114 C 0
s Pan_paniscus.KQ411613.1                                    40834 26 +     80009 A-------------T------------AG--TAAACCAATCA---T----A------GT-----A---A---GT----A--------AT
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189139726 26 + 189151597 A-------------T------------AG--TAAACCAATCA---T----A------GT-----A---A---GT----A--------AT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  148985 26 +    230217 a-------------t------------aa--taaa-t--cag---t----a------atca-t-g---a---gt----g--------aa
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                262192 26 +  18783137 a-------------t------------aa--taaa-t--cag---t----a------atca-t-g---a---gt----g--------aa
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4718828 26 -   8748460 a-------------t------------aa--taaa-t--cag---t----a------atca-t-g---a---gt----g--------aa
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183439943 26 + 183742232 A-------------T------------AG--TAAACCAATCA---T----A------GT-----A---A---GT----A--------AT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             3636 26 +     20448 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20560441 26 +  20919399 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   2379 26 +     41871 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     5665 26 +     27711 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  5744 26 +      9205 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10446 26 -     78924 a-------------t------------aa--taca-t--cag---t----a------at-agt-g---a---gt----a--------aa
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            6823 25 +     13100 a-------------t------------aa--ggac-cagtaa---t----a------gc-----a---a---gt----g--------aa
i Perodicticus_ibeanus.k141_855320                       I 115 C 0
s Perodicticus_potto.k141_1092580                             5196 25 +     25941 a-------------t------------aa--ggac-cagtaa---t----a------gc-----a---a---gt----g--------aa
i Perodicticus_potto.k141_1092580                        I 115 C 0
s Peromyscus_maniculatus.KI615324.1                       18191274 20 -  18517816 a-------------t------------aa--taaa-a--tgg---tac--a------gt-----a---a--------------------
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Piliocolobus_badius.k141_1234363                           40421 26 +     62158 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        35143 26 +     89929 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            36559 26 +     51399 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14292797 26 -  14605196 A-------------T------------AG--TAAACCAATCA---T----A------GT-----A---A---GT----A--------AT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189127868 26 + 189387572 A-------------T------------AG--TAAACCAATCA---T----A------GT-----A---A---GT----A--------AT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9567476 26 +   9816681 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               70071 26 -     81375 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              1891 26 +     19060 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2594120 24 -   4620579 A-------------T------------A---TAAA-CAGTAA---T----A------GT-----A---A---GT----G--------AA
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     988110 24 +   2598838 A-------------C------------G---TAAA-CAGTAA---T----A------GT-----A---A---gt----g--------aa
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          26421 24 +     38485 a-------------c------------g---taaa-cagtaa---t----a------gt-----a---a---gt----g--------aa
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             2580 24 +      4256 a-------------c------------g---taaa-cagtaa---t----a------gt-----a---a---gt----g--------aa
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          23940 24 +     35766 a-------------c------------g---taaa-cagtaa---t----a------gt-----a---a---gt----g--------aa
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           2122 24 -     24134 a-------------c------------g---taaa-cagtaa---t----a------gt-----a---a---gt----g--------aa
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        25935 24 -     67325 a-------------c------------g---taaa-cagtaa---t----a------gt-----a---a---gt----g--------aa
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           2173 24 -      6182 a-------------c------------g---taaa-cagtaa---t----a------gt-----a---a---gt----g--------aa
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             7003 21 -     21651 a-------------t------------aa--taaa-g--taa---tac--a------gt-----aa--a--------------------
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            12495 24 -     21811 gttttatcct-ttct------------aa--taaa-c--cac-----------------------------------------------
i Pteronotus_parnellii.KE909381.1                        C 0 I 10
s Pteronura_brasiliensis.PteBra_flattened_line_31117         38022 33 +     42204 a-------------c------------aa--taaa-g--tgg---c----a------at-agt-g---a---gt----attttcct-ga
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Puma_concolor.QAVW01001104.1                            20272107 26 -  38429054 a-------------t------------aa--taaa-t--cag---t----a------atca-t-g---a---gt----g--------aa
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             11903 26 -     91421 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7606031 26 +   7812017 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11879 26 -     72585 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53567536 20 +  90668790 a-------------t------------aa--taaa-a--tga---tac--a------gt-----a---a--------------------
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             3586 26 -     11128 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91232941 26 - 195417433 A-------------T------------AG--TAAACCAATCA---T----A------GT-----A---A---GT----A--------AT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7668590 26 +   7961872 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_2619299                               4796 16 -      8359 a-------------g------------ag--taaaccaatac---t-------------------------------------------
i Saguinus_bicolor.k141_2619299                          C 0 I 10
s Saguinus_geoffroyi.k141_1413670                            11104 16 -     13588 a-------------g------------ag--taaaccaatac---t-------------------------------------------
i Saguinus_geoffroyi.k141_1413670                        C 0 I 10
s Saguinus_imperator.k141_717981                              4742 16 -      6207 a-------------g------------ag--taaaccaatac---t-------------------------------------------
i Saguinus_imperator.k141_717981                         C 0 I 10
s Saguinus_inustus.k141_699149                               10469 16 +     13640 a-------------g------------ag--taaaccaatac---t-------------------------------------------
i Saguinus_inustus.k141_699149                           C 0 I 10
s Saguinus_labiatus.k141_285685                               5332 16 +      8564 a-------------g------------ag--taaaccaatac---t-------------------------------------------
i Saguinus_labiatus.k141_285685                          C 0 I 10
s Saguinus_midas.LG03                                    209465609 16 + 209938924 a-------------g------------ag--taaaccaatac---t-------------------------------------------
i Saguinus_midas.LG03                                    C 0 I 10
s Saguinus_mystax.k141_374627                                 4822 16 -      9399 a-------------g------------ag--taaaccaatac---t-------------------------------------------
i Saguinus_mystax.k141_374627                            C 0 I 11
s Saguinus_oedipus.k141_63850                                 1969 16 +      3421 a-------------g------------ag--taaaccaatac---t-------------------------------------------
i Saguinus_oedipus.k141_63850                            C 0 I 10
s Saimiri_boliviensis.NW_024100920.1                     119948154 16 - 121099817 A-------------G------------AG--TAAACCAATAC---T-------------------------------------------
i Saimiri_boliviensis.NW_024100920.1                     C 0 I 10
s Saimiri_cassiquiarensis.k141_2188234                       20621 16 +     46362 a-------------g------------ag--taaaccaatac---t-------------------------------------------
i Saimiri_cassiquiarensis.k141_2188234                   C 0 I 10
s Saimiri_macrodon.k141_716185                               20716 16 +     45824 a-------------g------------ag--taaaccaatac---t-------------------------------------------
i Saimiri_macrodon.k141_716185                           C 0 I 10
s Saimiri_oerstedii.k141_1487881                             37331 16 -     64574 a-------------g------------ag--taaaccaatac---t-------------------------------------------
i Saimiri_oerstedii.k141_1487881                         C 0 I 10
s Saimiri_sciureus.k141_2278166                                337 16 -     23631 a-------------g------------ag--taaaccaatac---t-------------------------------------------
i Saimiri_sciureus.k141_2278166                          C 0 I 10
s Saimiri_ustus.k141_1484609                                 20609 16 -     61129 a-------------g------------ag--taaaccaatac---t-------------------------------------------
i Saimiri_ustus.k141_1484609                             C 0 I 10
s Semnopithecus_entellus.k141_11662                          16414 26 -     19888 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      23616 26 +     39453 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            4142 26 +     27826 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             3663 26 -     19483 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      3725 26 +      7198 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         11985 26 +     15514 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    10697 20 -     12148 a-------------t------------aa--taaa-a--tga---tac--a------at-----a---a--------------------
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               1647 26 +   1910179 a-------------t------------aa--caaa-c--cac---t----a------at-----a---gtagcc----a--------aa
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1950161 18 -   3870691 a-------------t------------ga--taaa-a--cag---t-tgta------g-------------------------------
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             28547 33 +     97271 a-------------t------------ag--taaa-g--tgg---t----a------at-agt-g---a---at----atttccct-ga
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              16110 26 -    196729 a-------------t------------aa--tcaa-c--cag---c----a------ac-agt-g---a---gt----c--------aa
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.JH118708.1                                      33036 26 -     47482 a-------------t------------aa--taaa-c--cag---t----aata---ag-----a---a---gt----a--------aa
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1090191 26 -   1523678 a-------------t------------ag--taaaccaatca---c----a------gt-----a---a---gt----a--------at
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 8473 38 +     41958 gtgttaccct-ttct------------aa--taat-c--cagcaat----a------gt-----a---a---gt----a--------ac
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      116547 21 -    156842 --------------t------------t------g-c--cag---t----a------at-a-gga---a---gt----t--------aa
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    384998 21 +    539355 --------------t------------t------g-c--cag---t----a------at-a-gga---a---gt----t--------aa
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               23515 26 +     70052 a-------------t------------aa--taaactagaaa---t----a------tt-----a---a---at----a--------aa
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_2029956                               2860 26 +      4644 a-------------t------------aa--taaactagaaa---t----a------tt-----a---a---at----a--------aa
i Tarsius_wallacei.k141_2029956                          C 0 C 0
s Theropithecus_gelada.CM009954.1                        186425308 26 + 186847797 A-------------T------------AG--TAAACCAATCA---T----A------GT-----A---A---GT----A--------AT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          7715 26 -     20410 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    11910 26 +     15221 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        7816 26 +     19930 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       4246 26 -     19997 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            44366 26 -     60166 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        11837 26 -     27529 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     11779 26 -     18194 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           5513 26 -     21137 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    4216 26 -     10723 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         3368 26 +      9834 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        21683 26 +     32220 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5935783 26 +   6242583 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        5031 26 +     20839 a-------------t------------ag--taaaccaatca---t----a------gt-----a---a---gt----a--------at
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2152258 26 +   4065304 a-------------t------------aa--ctat-c--tgg---tgc-ta------at-----c---a---tt----g--------aa
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     5571 26 -     10553 a-------------t------------aa--ttaa-c--tgg---tgc-ta------ac-----a---a---tt----g--------aa
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4848267 24 -   5085361 a-------------t------------aa--taaa-c--cag---t----a------atgg-t-g---a---gt----a----------
i Ursus_maritimus.KK499267.1                             C 0 I 2
s Varecia_rubra.k141_590885                                   8803 24 +     50397 a-------------t------------a---taaa-cagtaa---t----a------gt-----a---a---gt----g--------aa
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              8857 24 +     24756 a-------------t------------a---taaa-cagtaa---t----a------gt-----a---a---gt----g--------aa
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5369707 26 -   5488506 a-------------t------------aa--taaa-c--cag---t----a------at-----aatga---gt----g--------aa
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  8714 33 -     43706 a-------------t------------aa--taaa-t--cag---g----a------gt-agt-g---a---gt----attttc-tgga
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        21540 18 -     24430 g-------------t------------aa--taaa-c--taa---c-tgta------g-------------------------------
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          2948 33 +     86975 a-------------t------------aa--taaa-c--cag---t----a------at-agt-g---a---gt----atttccct-ga
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      12240 21 +     63895 a-------------c------------ag--taaa-a--tga---ta-atg------at-----a---a--------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519  0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188  0 +      1777 C
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383  9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   2809  0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 70244  0 +    116680 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                85637 14 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Pteropus_vampyrus.KN525825.1                             1357734 14 +   4952924 I
e Pteropus_alecto.KB030862.1                              22974644 14 +  28871421 I
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Oryctolagus_cuniculus.CM000791.1                        67144574 44 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186890  0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Megaderma_lyra.MegLyr_scaffold_4542                         8178  0 -    207569 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 88455  4 +     94391 I
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3730 44 -     14121 I
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_29171               41045  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       109621  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Eidolon_helvum.KE759718.1                                   8374  9 +     11740 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            61949  0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Crocidura_indochinensis.CroInd_scaffold_287352              1624  0 +      4208 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          11837  0 -     20389 C
e Condylura_cristata.JH655891.1                           17547132  5 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            171068  0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15969  0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            5641  0 -      6351 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       3508 50 +     62944 GC-TTT-CTCT-GAG------------------TT-A-----TGTGAGT----------------------------CATTCTAGTGA-GTT---T-TG-AAA--CCT---G---------CA----C----A
s Acinonyx_jubatus.LLWD01001279.1                           825137 43 -   1699592 gtattt-tcct-gag------------------tt-c-----tat-agg----------------------------t---ctagcaa-att---a-ct-tta--act---g---------------------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 1
s Acomys_cahirinus.AcoCah_scaffold_12655                     67764 52 +     87051 --------------gggaagtgt-ttccctgagtt-c-----tgtgtgt----------------------------cattgcagtta-att---t-tt-aag--cct---g---------------------
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 12
s Ailuropoda_melanoleuca.LNAT01000098.1                    9508387 39 -  29979442 -----t-tcct-ggg------------------tt-c-----taggagt----------------------------t---ctagcaa-att---a-ct-gaa--cct---g---------------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 2 I 1
s Ailurus_fulgens.LNAC01001112.1                             77169 44 -    347723 gcattt-tcct-gac------------------tt-c-----tatgagt----------------------------t---ctagaaa-att---a-ct-gaa--cct---g---------------------
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 1
s Allactaga_bullata.AllBul_scaffold_9566                     67682 46 -     89534 --------------ttaaagtgt-tttcctgagtt-c-----tgtgagt----------------------------cattctagTGA-TGT---T-TT-T--------------------------------
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 2536
s Allenopithecus_nigroviridis.k141_3361533                   11435 50 -     52922 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------cattctagtga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         11369 50 -     28001 gc-ttt-ctgt-gag------------------tt-c-----taggagt----------------------------cattctagtga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          1815 50 -     18505 gc-ttt-ctgt-gag------------------tt-c-----taggagt----------------------------cattctagtga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           2664 50 -     12518 gc-ttt-ctgt-gag------------------tt-c-----taggagt----------------------------cattctagtga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                               270 50 -     27731 gc-ttt-ctct-gag------------------tt-c-----tgtgagt----------------------------cattctagtga-gct---t-tg-aaa--ccc---g---------ca----c----a
i Alouatta_belzebul.k141_3238538                         I 10 C 0
s Alouatta_caraya.k141_1743867                                 393 50 +      3134 gc-ttt-ctct-gag------------------tt-c-----tgtgagt----------------------------cattctagtga-gct---t-tg-aaa--ccc---g---------ca----c----a
i Alouatta_caraya.k141_1743867                           I 10 C 0
s Alouatta_discolor.k141_743489                                531 50 -     45847 gc-ttt-ctct-gag------------------tt-c-----tgtgagt----------------------------cattctagtga-gct---t-tg-aaa--ccc---g---------ca----c----a
i Alouatta_discolor.k141_743489                          I 10 C 0
s Alouatta_juara.k141_1509701                                21735 50 +     25266 gc-ttt-ctct-gag------------------tt-c-----tgtgagt----------------------------cattctagtga-gct---t-tg-aaa--ccc---g---------ca----c----a
i Alouatta_juara.k141_1509701                            I 10 C 0
s Alouatta_macconnelli.k141_1406484                            919 50 +      2906 gc-ttt-ctct-gag------------------tt-c-----tgtgagt----------------------------cattctagtga-gct---t-tg-aaa--ccc---g---------ca----c----a
i Alouatta_macconnelli.k141_1406484                      I 10 C 0
s Alouatta_nigerrima.k141_3472759                            15032 50 -     18578 gc-ttt-ctct-gag------------------tt-c-----tgtgagt----------------------------cattctagtga-gct---t-tg-aaa--ccc---g---------ca----c----a
i Alouatta_nigerrima.k141_3472759                        I 10 C 0
s Alouatta_palliata.k141_2135620                               422 51 +     47717 gc-ttt-ctct-gag------------------ttcc-----tgtgagt----------------------------cattctagggc-gct---t-tg-aaa--ccc---g---------ca----c----a
i Alouatta_palliata.k141_2135620                         I 10 C 0
s Alouatta_puruensis.k141_1253230                              550 50 -      3544 gc-ttt-ctct-gag------------------tt-c-----tgtgagt----------------------------cattctagtga-gct---t-tg-aaa--ccc---g---------ca----c----a
i Alouatta_puruensis.k141_1253230                        I 10 C 0
s Alouatta_seniculus.k141_117119                             11769 50 +     50774 gc-ttt-ctct-gag------------------tt-c-----tgtgagt----------------------------cattctagtga-gct---t-tg-aaa--ccc---g---------ca----c----a
i Alouatta_seniculus.k141_117119                         I 10 C 0
s Aotus_azarae.k141_3104676                                  12397 50 -     33861 gc-ttt-ttct-gag------------------tt-c-----taggagt----------------------------cattcgagtga-gct---t-tg-aaa--ccc---a---------cg----c----a
i Aotus_azarae.k141_3104676                              I 6 C 0
s Aotus_griseimembra.k141_2240599                            12418 50 -     34016 gc-ttt-ttct-gag------------------tt-c-----taggagt----------------------------cattcgagtga-gct---t-tg-aaa--ccc---a---------ca----c----a
i Aotus_griseimembra.k141_2240599                        I 6 C 0
s Aotus_nancymaae.KZ198451.1                               4294813 50 -   5030052 GC-TTT-TTCT-GAG------------------TT-C-----TAGGAGT----------------------------CATTCGAGTGA-GCT---T-TG-AAA--CCC---A---------CA----T----A
i Aotus_nancymaae.KZ198451.1                             I 6 C 0
s Aotus_trivirgatus.k141_2152450                             12419 50 -     34685 gc-ttt-ttct-gag------------------tt-c-----taggagt----------------------------cattcgagtga-gct---t-tg-aaa--ccc---a---------ca----c----a
i Aotus_trivirgatus.k141_2152450                         I 6 C 0
s Aotus_vociferans.k141_344750                               25540 50 -     47192 gc-ttt-ttct-gag------------------tt-c-----taggagt----------------------------cattcgagtga-gct---t-tg-aaa--ccc---a---------ca----c----a
i Aotus_vociferans.k141_344750                           I 6 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       9043 68 +     20879 ----------a-aagtaaagtgtctttc-tgattt-c-----tgtgcat----------------------------cattttagtga-att---t-tt-gaa--act---cagtggggg-ag---tg----g
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        16615 51 +     17124 gtgttt-ccct-cag------------------tt-c-----tatgatt----------------------------catttttgtga-ctt---t-tc-aaa--ccc---a---------aa----g----a
i Arctocebus_calabarensis.k141_288239                    C 0 C 0
s Avahi_laniger.k141_765380                                  51078 49 -     92717 gtgttt-ccct-gag------------------tt-c-----tgtgagt----------------------------cgttctcatga-att---t-cc-aaa--cat---g---------ag----------
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              51707 49 +     85213 gtgttt-ccct-gag------------------tt-c-----tgtgagt----------------------------cgttctcatga-att---t-cc-aaa--cat---g---------ag----------
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             2162 50 -     10423 ac-ttt-ctct-gag------------------tt-c-----taggagt----------------------------cattctagtga-gct---t-tg-aaa--ccc---g---------ca----t----g
i Callibella_humilis.k141_1278103                        I 6 C 0
s Callimico_goeldii.k141_1091182                             21653 50 +     31915 ac-ttt-ctct-gag------------------tt-c-----taggagt----------------------------cattctagtga-gct---c-tg-aaa--ccc---a---------ca----c----a
i Callimico_goeldii.k141_1091182                         I 10 C 0
s Callithrix_geoffroyi.k119_512088                            2132 50 +      5267 ac-ttt-ctct-gag------------------tt-c-----taggagt----------------------------cattctagtga-gct---t-tg-aaa--ccc---g---------ca----c----g
i Callithrix_geoffroyi.k119_512088                       I 10 C 0
s Callithrix_jacchus.pat_scaffold_3                       23587345 50 - 189096842 AC-TTT-CTCT-GAG------------------TT-C-----TAGGAGT----------------------------CATTCTAGTGA-GCT---T-TG-AAA--CCC---G---------CA----C----G
i Callithrix_jacchus.pat_scaffold_3                      I 10 C 0
s Callithrix_kuhlii.k119_1164682                              8876 50 -     12001 ac-ttt-ctct-gag------------------tt-c-----taggagt----------------------------cattctagtga-gct---t-tg-aaa--ccc---g---------ca----c----g
i Callithrix_kuhlii.k119_1164682                         I 10 C 0
s Camelus_bactrianus.KN276810.1                           10000233 56 -  17673402 gtgttt-tcct-gag------------------tt-c-----tgtgagt----------------------------tgtgctagcaa-atc---a-gt-gaa--cct---g-g-------gg----atgggg
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2332697 56 -   7040546 gtgttt-tcct-gag------------------tt-c-----tgtgagt----------------------------tgtgctagcaa-atc---a-gt-gaa--cct---g-g-------gg----atgggg
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  400973 56 -   1652518 gtgttt-tcct-gag------------------tt-c-----tgtgagt----------------------------tgtgctagcaa-atc---a-gt-gaa--cct---g-g-------gg----atgggg
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17797131 44 -  60362399 gtgttt-tcct-gag------------------tt-c-----tatgagt----------------------------t---ctagcaa-att---a-ct-gaa--cct---g---------------------
i CanFam4.chr16                                          C 0 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    183188 44 -    185531 gtgttt-tcct-gag------------------tt-c-----tatgagt----------------------------t---ctagcaa-att---a-ct-gaa--cct---g---------------------
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 I 1
s Canis_lupus_dingo.QKWQ01000480.1                         9032574 44 -   9314153 gtgttt-tcct-gag------------------tt-c-----tatgagt----------------------------t---ctagcaa-att---a-ct-gaa--cct---g---------------------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 1
s Canis_lupus_familiaris.chr16                            17956839 44 -  59632846 gtgttt-tcct-gag------------------tt-c-----tatgagt----------------------------t---ctagcaa-att---a-ct-gaa--cct---g---------------------
i Canis_lupus_familiaris.chr16                           C 0 I 1
s Canis_lupus_orion.HG994398.1                            18498139 44 +  63665305 gtgttt-tcct-gag------------------tt-c-----tatgagt----------------------------t---ctagcaa-att---a-ct-gaa--cct---g---------------------
i Canis_lupus_orion.HG994398.1                           C 0 I 1
s Carlito_syrichta.NW_007259797.1                           153437 47 -    496798 gCATTT-TCCT-GAG------------------TT-C-----TGCAAGT----------------------------TCTT----TGA-ATT---T-TC-AGA--CGT---G---------AG----G----G
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    135513 25 +    179628 ---------------------------------tt-c-----tctgagt----------------------------catcctagtgagatt-----------------------------------------
i Castor_canadensis.CasCan_scaffold_2074                 I 14 I 21
s Catagonus_wagneri.CatWag_scaffold_2839                     90558 58 +    217609 atgttt-tcct-gag------------------tt-c-----tgtgagt----------------------------tgttctagcaa-agt---a-gtgaaa--ctg---g-ttg---t-gg----g-gg-g
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          6786 50 -     11392 ac-ttt-ctct-gag------------------tt-c-----taggagt----------------------------cattctagtga-gct---t-tg-aat--ccc---g---------ca----c----g
i Cebuella_niveiventris.k141_1251222                     I 10 C 0
s Cebuella_pygmaea.k141_1309012                               2884 50 -      7577 ac-ttt-ctct-gag------------------tt-c-----taggagt----------------------------cattctagtga-gct---t-tg-aat--ccc---g---------ca----c----g
i Cebuella_pygmaea.k141_1309012                          I 10 C 0
s Cephalopachus_bancanus.k141_1423433                         2936 47 +     31688 gcattt-tcct-gag------------------tt-c-----tgcaagt----------------------------tctt----tga-att---t-tc-aga--cct---g---------ag----g----g
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12229243 46 +  27778364 gtgttt-tcct-gag------------------tt-c-----tgtgtgt----------------------------tgtcctagcaa-att---a-tc-aaa--ctt-------------------------
i Ceratotherium_simum.JH767749.1                         C 0 I 6
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634            270 46 -     25243 gtgttt-tcct-gag------------------tt-c-----tgtgtgt----------------------------tgtcctagcaa-att---a-tc-aaa--ctt-------------------------
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 I 6
s Cercocebus_atys.KQ010504.1                               4472395 50 +   4669795 GC-TTT-CTGT-GAG------------------TT-C-----TATGAGT----------------------------CATTCTAGTGA-GTT---T-TG-AAA--CCT---G---------CA----C----A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        10942 50 -     19203 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------cattctagtga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           5364 50 +      8260 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------cattctagtga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           5591 50 +     27781 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------cattctagtga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         5746 50 -     20310 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------cattctagtga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           8730 50 +     29689 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------cattctagtga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            3158 50 +      9989 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------cattctagtga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          11407 50 -     27936 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------cattctagtga-gtt---t-tg-aaa--cct---g---------ta----c----a
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                             279 50 -     17152 gc-ttt-ctgt-cgg------------------tt-c-----tatgagt----------------------------cattctagtga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38813812 50 +  39242232 gc-ttt-ctgt-gag------------------tt-c-----tatgagc----------------------------cattctagtga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21219508 50 -  21565898 gc-ttt-ctgt-cag------------------tt-c-----tatgagt----------------------------cattctagtga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       36627 50 -     53127 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------cattctagtga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        3913 50 +      7159 gc-ttt-ctgt-gag------------------tt-c-----tatgagc----------------------------cattctagtga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       11430 50 -     27947 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------cattctagtga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         11403 50 +     17596 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------cattctagtga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                           628 50 +     26000 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------cattctagtga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             18505 48 -     52598 gtgttt-ccct-gag------------------tt-c-----tgtgagt----------------------------cactcttgtga-att---t-tc-aaa--cct---g---------a-----------
i Cheirogaleus_major.k141_333249                         C 0 I 2
s Cheirogaleus_medius.k141_1055463                           13855 48 +     57038 gtgttt-ccct-gag------------------tt-c-----tgtgagt----------------------------cgctcttgtga-att---t-tc-aaa--cct---g---------a-----------
i Cheirogaleus_medius.k141_1055463                       C 0 I 2
s Chiropotes_albinasus.k141_2813271                           7797 50 +     11226 gc-ttt-ctct-gag------------------tt-c-----taggagt----------------------------cattctagtga-gct---t-tg-aaa--ccc---g---------ca----c----a
i Chiropotes_albinasus.k141_2813271                      I 10 C 0
s Chlorocebus_aethiops.ctg25                              18425368 50 -  18827391 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------cattctagtga-gtt---t-tg-aaa--tct---g---------ca----c----a
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       11809 50 -     50209 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------cattctagtga-gtt---t-tg-aaa--tct---g---------ca----c----a
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135418815 50 + 135778131 GC-TTT-CTGT-GAG------------------TT-C-----TATGAGT----------------------------CATTCTAGTGA-GTT---T-TG-AAA--CCT---G---------CA----C----A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1907331 50 +   2368649 GC-TTT-CTGT-GAG------------------TT-C-----TATGAGT----------------------------GATTCTAGTGA-GTT---T-TG-AAA--CCT---G---------CA----C----A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199947003 50 + 200372422 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------tattctagtga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              33875 50 +     84244 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------tattctagtga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          11837 18 -     20389 ----tt-tcct-gag------------------tt-a-----a------------------------------------tttct-------------------------------------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 9
s Cricetomys_gambianus.CriGam_scaffold_18520                 47474 54 +     63868 --------------ataaagcgt-ttccctgagtt-c-----tgtaagt----------------------------cattccagtga-att---t-tt-gaatacgt---g---------------------
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 9
s Cricetulus_griseus.LT883664.1                           11664807 52 + 224834208 --------------gcaaagtgt-ttccctgtgtt-c-----tgtgagt----------------------------cattacagtga-att---t-tt-gag--cct---g---------------------
i Cricetulus_griseus.LT883664.1                          C 0 I 11
s Cryptoprocta_ferox.CryFer_flattened_line_16129             26306 44 -     87169 gtgttt-tcct-gag------------------tt-c-----tgtgagt----------------------------t---ttagcaa-att---t-ct-gta--att---g---------------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 1
s Ctenodactylus_gundi.CteGun_scaffold_65                    834594 41 +   1526836 ---------------------------------gt-c-----tgtgagt----------------------------cataaaagtga-gtt---t-tt-aaa--cct---gaat----a--g----g----g
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 22 C 0
s Daubentonia_madagascariensis.ctg71                      12534679 51 -  12879189 gtgttt-ccca-ggg------------------tt-c-----tgtgagt----------------------------cattcttgtga-att---t-tc-aaa--cct---g---------ag----c----a
i Daubentonia_madagascariensis.ctg71                     C 0 I 1
s Dicerorhinus_sumatrensis.PEKH010002091.1                  671095 46 +   1390856 gtgttt-tcct-gag------------------tt-c-----tgtgtgt----------------------------tgtcctagcaa-att---a-tc-aaa--ctt-------------------------
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 6
s Diceros_bicornis.DicBicMic_scaffold_5955                    3851 46 +    198055 gtgttt-tcct-gag------------------tt-c-----tgtgtgt----------------------------tgtcctagcaa-att---a-tc-aaa--ctt-------------------------
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 6
s Eidolon_helvum.KE759718.1                                   8383 17 +     11740 ---------------------------------TT-C-----TTTAAGT----------------------------TGTTCTT-------------------------------------------------
i Eidolon_helvum.KE759718.1                              I 9 I 9
s Ellobius_lutescens.LOEQ01008920.1                          16993 52 -    110024 --------------gtaaagtgt-ttcactgagtt-c-----tgtgtgt----------------------------cattacagtga-aat---t-tt-aag--cct---g---------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 13
s Ellobius_talpinus.LOJH01109367.1                            3047 52 -      6299 --------------gtaaattgt-ttcactgagtt-c-----tgtgtgt----------------------------cattacagtga-aat---t-tt-aag--cct---g---------------------
i Ellobius_talpinus.LOJH01109367.1                       C 0 I 13
s Enhydra_lutris.KZ291758.1                               16327148 44 -  41312741 gcattt-tcct-gag------------------tt-c-----tatgagt----------------------------t---ctagcaa-att---a-ct-gaa--cct---g---------------------
i Enhydra_lutris.KZ291758.1                              C 0 I 1
s Equus_asinus.JREZ01000139.1                              1281149 52 +   4378816 gtgtc--tcct-gag------------------tt-c-----tgtgtgt----------------------------tattctagcaa-att---a-tc-aaa--gtt---g-gt------gg----g----g
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18528969 52 -  39960074 gtgtc--tcct-gag------------------tt-c-----tgtgtgt----------------------------tattctagcaa-att---a-tc-aaa--gtt---t-gt------gg----g----g
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               30984 52 +    498745 gtgtc--tcct-gag------------------tt-c-----tgtgtgt----------------------------tattctagcaa-att---a-tc-aaa--gtt---t-gt------gg----g----g
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21202010 50 -  21539334 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------cattctagtga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              11189 48 -     14127 gtgtct-ccct-gag------------------tt-c-----tgtaagt----------------------------cattcctgtga-att---t-tc-aaa--cct---c---------a-----------
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                3887 48 -     16928 gtgtct-ccct-gag------------------tt-c-----tgtaagt----------------------------cattcctgtga-att---t-tc-aaa--cct---c---------a-----------
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              12920 48 -     25546 gtgtct-ccct-gag------------------tt-c-----tgtgagt----------------------------cattcctgtga-att---t-tc-aaa--cct---c---------a-----------
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            10105 48 +     26330 gtgtct-ccct-gag------------------tt-c-----tgtgagt----------------------------cattcttgtga-att---t-tc-aaa--cct---c---------a-----------
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 11353 48 +     23973 gtgtct-ccct-gag------------------tt-c-----tgtaagt----------------------------cattcctgtga-att---t-tc-aaa--cct---c---------a-----------
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                10105 48 +     75513 gtgtct-ccct-gag------------------tt-c-----tgtgagt----------------------------cattcttgtga-att---t-tc-aaa--cct---c---------a-----------
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  8056 48 +     97555 gtgtct-ccct-gag------------------tt-c-----tgtgagt----------------------------cattcctgtga-att---t-tc-aaa--cct---c---------a-----------
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            10984 48 +     26496 gtgtct-ccct-gag------------------tt-c-----tgtgagt----------------------------cattcctgtga-att---t-tc-aaa--cct---c---------a-----------
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  1589 48 -     17153 gtgtct-ccct-gag------------------tt-c-----tgtaagt----------------------------cattcctgtga-att---t-tc-aaa--cct---c---------a-----------
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              11165 48 +    111500 gtgtct-ccct-gag------------------tt-c-----tgtgagt----------------------------cattcctgtga-att---t-tc-aaa--cct---c---------a-----------
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20235003 43 + 206538554 gtattt-tcct-gag------------------tt-c-----tat-agg----------------------------t---ctagcaa-att---a-ct-tta--act---g---------------------
i Felis_catus.CM001381.2                                 C 0 I 1
s Felis_catus_fca126.CM031415.1                           20193847 43 + 205367284 gtattt-tcct-gag------------------tt-c-----tat-agg----------------------------t---ctagcaa-att---a-ct-tta--act---g---------------------
i Felis_catus_fca126.CM031415.1                          C 0 I 1
s Felis_nigripes.FelNig_flattened_line_20823                  7359 43 -     36744 gtattt-tcct-gag------------------tt-c-----tat-aga----------------------------t---ctagcaa-att---a-ct-tta--act---g---------------------
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 1
s Galago_moholi.ctg2040                                     423436 51 -    453645 gtattT-CCCC-CAG------------------TT-C-----TATGAGT----------------------------CATTTTTGTGA-CTT---T-TT-AAA--CCC---A---------AA----G----G
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             1143 51 +     11339 gtattT-CCCC-CAG------------------TT-C-----TATGAGT----------------------------CATTTTTGTGA-CTT---T-TT-AAA--CCC---A---------AA----G----G
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1959596                            4943 51 +      6795 gtattt-cccc-cag------------------tt-c-----tatgagt----------------------------catttttgtga-ctt---t-tc-aaa--ccc---a---------aa----g----g
i Galagoides_demidoff.k141_1959596                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_266699               1656 40 +      2098 gtgttt-ccct-gag------------------tt-c-----t----------------------------------------agtga-att---t-tc-aaa--cct---g-------c-gg----t----g
i Galeopterus_variegatus.GalVar_scaffold_266699          C 0 C 0
s Gorilla_beringei.k141_3596273                              12742 50 -     32273 gc-ttt-ctct-gag------------------tt-a-----tgtgagt----------------------------cattctagtga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186334890 50 + 186649187 gc-ttt-ctct-gag------------------tt-a-----tgtgagt----------------------------cattctagtga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   31965 24 +     78134 ---------------------------------tt-c-----tatgagt----------------------------cattctagtta-att-----------------------------------------
i Graphiurus_murinus.GraMur_scaffold_10447               I 13 I 4
s Hapalemur_alaotrensis.k141_170648                           4246 47 -     19426 -cgtct-ccct-gag------------------tt-c-----tgtgagt----------------------------cattcttgtga-att---t-tc-aaa--cct---g---------a-----------
i Hapalemur_alaotrensis.k141_170648                      I 24 C 0
s Hapalemur_gilberti.k141_488810                              9390 47 -     15286 -tgtct-ccct-gag------------------tt-c-----tgtgagt----------------------------cattcttgtga-att---t-tc-aaa--cct---g---------a-----------
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             11028 47 +     18253 -tgtct-ccct-gag------------------tt-c-----tgtgagt----------------------------cattcttgtga-att---t-tc-aaa--cct---g---------a-----------
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         11131 47 -     41752 -tgtct-ccct-gag------------------tt-c-----tgtgagt----------------------------cattcttgtga-att---t-tc-aaa--cct---g---------a-----------
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         10968 47 -     16460 -tgtct-ccct-gag------------------tt-c-----tgtgagt----------------------------cattcttgtga-att---t-tc-aaa--cct---g---------a-----------
i Hapalemur_occidentalis.k141_907772                     I 24 C 0
s Helogale_parvula.HelPar_flattened_line_2585               240139 44 +    327341 gtgctt-tcct-cag------------------tt-c-----tctgagt----------------------------t---ttagcaa-act---a-ct-gta--act---g---------------------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 1
s Hipposideros_armiger.JXIK01000431.1                       109621 53 +   1711038 ----tt-tcct-aaa------------------tt-c-----tttaagttgttttagcaaa-tcatcaaaccttgtgtgtgcgt-------------------------------------------------
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 12
s Hipposideros_galeritus.HipGal_scaffold_29171               41045 54 +     43066 ----tt-tcct-aaa------------------tt-c-----tttaagttgttttagcaaaatcatcaaatcttgtgtgttttt-------------------------------------------------
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 I 9
s Hoolock_leuconedys.ctg274                                    431585 50 +    630532 gc-ttt-ctct-gag------------------tt-a-----tgtgagt----------------------------cattctagtga-gtt---t-tg-gga--cct---g---------ca----c----a
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  42284 43 +     55795 gtgctt-tcct-gag------------------t--c-----catgagt----------------------------t---ttagcaa-atc---a-ct-gta--act---g---------------------
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 1
s Hylobates_agilis.k141_307679                               14519 50 -     15490 gc-ttt-ctct-gag------------------tt-a-----tgtgagt----------------------------cattctagtga-gtt---t-cg-gga--cct---g---------ca----c----a
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              56525 50 +     67168 gc-ttt-ctct-gag------------------tt-a-----tgtgagt----------------------------cattctagtga-gtt---t-cg-gga--cct---g---------ca----c----a
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189540175 50 - 191637585 gc-ttt-ctct-gag------------------tt-a-----tgtgagt----------------------------cattctagtga-gtt---t-cg-gga--cct---g---------ca----c----a
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3333069 50 -  11177569 gc-ttt-ctct-gag------------------tt-a-----tgtgagt----------------------------cattctagtga-gtt---t-cg-gga--cct---g---------ca----c----a
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7517095 68 -   7955117 ----------ttaaataaagtgtctttc-tgattt-c-----agggagt----------------------------cattttactga-atc---t-tt-gaa--cct---ga-aggaggcag----g----g
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   19935 49 +     31101 gtgttt-ccct-gag------------------tt-c-----tgtgagt----------------------------cgttcttgtga-att---t-tc-aaa--cct---g---------ag----------
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8273716 47 -   9596543 --------------ttaaagtat-ttccctgaata-c-----tgtgaat----------------------------cagtcaagtat-ttt---t-ttgt--------------------------------
i Jaculus_jaculus.JH725527.1                             C 0 I 2322
s Lemur_catta.scaffold_24                                 15521493 47 -  30322482 -tgtct-ccct-gag------------------tt-c-----tgtgagt----------------------------cattcttgtga-att---t-tc-aaa--cct---g---------a-----------
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        4567 50 +     64341 gc-ttt-ctct-gag------------------tt-c-----taggagt----------------------------cattctagtga-gct---t-tg-aaa--ccc---g---------ca----c----a
i Leontocebus_fuscicollis.k141_1820339                   I 10 C 0
s Leontocebus_illigeri.k141_3350179                           1627 50 +      4941 gc-ttt-ctct-gag------------------tt-c-----taggagt----------------------------cattctagtga-gct---t-tg-aaa--ccc---g---------ca----c----a
i Leontocebus_illigeri.k141_3350179                      I 10 C 0
s Leontocebus_nigricollis.k141_4610752                        4495 50 +     35603 gc-ttt-ctct-gag------------------tt-c-----taggagt----------------------------cattctagtga-gct---t-tg-aaa--ccc---g---------ca----c----a
i Leontocebus_nigricollis.k141_4610752                   I 10 C 0
s Leontopithecus_chrysomelas.k141_1519602                    25923 50 +     38576 gc-ttt-ctct-gag------------------tt-c-----taggagt----------------------------cattctagtga-gct---t-tg-aaa--ccc---a---------ca----c----a
i Leontopithecus_chrysomelas.k141_1519602                I 10 C 0
s Leontopithecus_rosalia.k141_464620                         22620 50 +     66356 gc-ttt-ctct-gag------------------tt-c-----taggagt----------------------------cattctagtga-gct---t-tg-aaa--ccc---a---------ca----c----a
i Leontopithecus_rosalia.k141_464620                     I 10 C 0
s Lepilemur_ankaranensis.k141_596936                          8381 48 -     23766 gtgttt-ccct-gag------------------tt-c-----tatgagt----------------------------catttttgtga-att---t-tc-aaa--tct---g---------a-----------
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             26328 48 +     45836 gtgttt-ccct-gag------------------tt-c-----tatgagt----------------------------catttttgtga-att---t-tc-aaa--tct---g---------a-----------
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      24383 48 +     54090 gtgttt-ccct-gag------------------tt-c-----tatgagt----------------------------catttttgtga-att---t-tc-aaa--tct---g---------a-----------
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3040282 44 +   3914936 gtgttt-tcct-gag------------------tt-c-----tatgagt----------------------------t---ctagcaa-att---a-ct-gaa--gct---g---------------------
i Leptonychotes_weddellii.KB714746.1                     C 0 I 1
s Lophocebus_aterrimus.ctg367                              1433940 50 +   1826925 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------cattctagtga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            2841 51 +     11245 gtgttt-cccc-cgg------------------tt-c-----tgtgagt----------------------------catttttgtga-cta---t-tc-aaa--ccc---a---------aa----g----g
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1001679 51 +   6120653 gtgttt-cccc-cgg------------------tt-c-----tatgagt----------------------------catttttgtga-cta---t-tc-aaa--ccc---a---------aa----g----g
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17953079 44 -  59628241 gtgttt-tcct-gag------------------tt-c-----tatgagt----------------------------t---ctagcaa-att---a-cc-gaa--cct---g---------------------
i Lycaon_pictus.CM007581.1                               C 0 I 1
s Macaca_arctoides.k141_2326796                               3761 50 +     40492 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------cattctactga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59673015 50 +  60120075 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------cattctactga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  9517 50 -     26193 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------cattctactga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            77313 50 -    114318 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------cattctactga-gtt---t-cg-aaa--cct---g---------ca----c----a
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  3028 50 -     23192 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------cattctactga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                12480 50 -     29190 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------cattctactga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  21048 50 +     37952 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------cattctactga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186836136 50 + 187317192 GC-TTT-ctgt-gag------------------tt-c-----tgtgagt----------------------------cattctacTGA-GTT---T-TG-AAA--CCT---G---------CA----C----A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25454699 50 -  25927173 GC-TTT-CTGT-GAG------------------TT-C-----TATGAGT----------------------------CATTCTACTGA-GTT---T-TG-AAA--CCT---G---------CA----C----A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  76897 50 +     89720 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------cattctactga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 3894 50 +     20474 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------cattctactga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   3696 50 -     14993 gc-ttt-ctgt-gag------------------tt-c-----catgagt----------------------------cattctactga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  326566 50 -    668171 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------cattctactga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 1998 50 -     24072 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------cattctactga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               22635 50 -     45290 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------cattctactga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88459 17 +     94391 ---------------------------------AT-C-----TTTCAGT----------------------------TGTTCTT-------------------------------------------------
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 4 I 9
s Mandrillus_leucophaeus.scaffold280                      23934214 50 -  24302211 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------cattctagtga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Mandrillus_leucophaeus.scaffold280                     I 43 C 0
s Mandrillus_sphinx.Contig270                               348347 50 +    752769 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------cattctagtga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              17283 59 +    737560 gtgtttttgct-gag------------------tt-c-----tcttagt----------------------------tattctagcaa-att---a-ct-gaa--cct---g-gcagtgg-ga----g----g
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              48668 59 -    317179 gtgtttttgct-gag------------------tt-c-----tctaagt----------------------------tattctagcaa-att---a-gt-gaa--cct---g-gcaatgg-ga----g----g
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33099407 68 -  40650429 ----------ttaaataaagtgtctttc-tgattt-c-----agggagt----------------------------cattttactga-att---t-tt-gaa--cct---ga-aggaggcag----g----g
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         8178 23 -    207569 ----tg-tcct-gca------------------tt-ctttaag------------------------------------tagct-------------------------------------------------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 9
s Mellivora_capensis.MelCap_flattened_line_69365              7856 44 +     13704 gcatct-tcct-gag------------------tt-c-----tatgagt----------------------------t---ctagcaa-att---a-ct-gaa--cct---g---------------------
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 1
s Meriones_unguiculatus.MerUng_scaffold_7390                 29373 52 +    140813 --------------gggaagtgt-tttcttgagtt-t-----tgttagt----------------------------catctcagtga-agt---t-tt-gag--cct---g---------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 12
s Mesocricetus_auratus.KB708134.1                         12179911 18 -  29670104 -----------------------------------------------------------------------------------agtga-att---t-tt-gag--cct---g---------------------
i Mesocricetus_auratus.KB708134.1                        I 14 I 14
s Mico_argentatus.k141_1239457                                2708 50 -      7380 ac-ttt-ctct-gag------------------tt-c-----taggagt----------------------------cattctagtga-gct---t-tg-aaa--ccc---g---------ca----t----g
i Mico_argentatus.k141_1239457                           I 6 C 0
s Mico_humeralifer.k141_1976199                               1778 50 +     18990 ac-ttt-ctct-gag------------------tt-c-----taggagt----------------------------cattctagtga-gct---t-tg-aaa--ccc---g---------ca----t----g
i Mico_humeralifer.k141_1976199                          I 6 C 0
s Mico_schneideri.k141_1950671                                      2713 50 -      7356 ac-ttt-ctct-gag------------------tt-c-----taggagt----------------------------cattctagtga-gct---t-tg-aaa--ccc---g---------ca----t----g
i Mico_schneideri.k141_1950671                                 I 6 C 0
s Microcebus_murinus.CM007674.1                           18288879 48 -  93316391 ATGTTt-acct-gag------------------tt-c-----tgtgagt----------------------------cgtTCTTGTGA-ATT---T-TC-AAA--CCT---G---------A-----------
i Microcebus_murinus.CM007674.1                          I 6 I 1
s Microtus_ochrogaster.CM001695.1                         11257147 52 -  27267610 --------------gtaaagcat-ttcactgagtt-c-----tgtgaat----------------------------cattaaagtga-att---t-tt-aag--cct---g---------------------
i Microtus_ochrogaster.CM001695.1                        C 0 I 368
s Miopithecus_ogouensis.k141_534055                           5936 50 -     28506 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------cattctagtga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         3119 44 -      8324 gtgttt-tcct-gag------------------tt-c-----tatgagt----------------------------t---ctagcaa-att---a-ct-gaa--gct---g---------------------
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 1
s Mirza_zaza.k141_952172                                      6448 48 -     37649 atgttt-acct-gag------------------tt-c-----tgtgagt----------------------------cattcttgtga-att---t-tc-aaa--cct---g---------a-----------
i Mirza_zaza.k141_952172                                 C 0 I 1
s Mormoops_blainvillei.MorMeg_scaffold_1417                 139135 52 -    366855 acattt-tcct-gaa------------------tt-c-----tttaagt----------------------------tgtcctagcaa-att---a-cc-aca--cct---g-g-------ga----a----g
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   33242 44 +     37127 gtgttt-tcct-cag------------------tt-c-----tatgagt----------------------------t---ttagcaa-act---a-ct-gta--act---g---------------------
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 1
s Mus_caroli.LT608237.1                                   84358474 52 - 120012414 --------------gtaaagtgt-ttctctgagct-c-----tgtgagt----------------------------cattccagtga-att---t-tt-gag--cct---g---------------------
i Mus_caroli.LT608237.1                                  C 0 I 13
s Mus_musculus.chr8                                       87647462 53 - 129401213 --------------gtaaagtgt-ttctctgagct-c-----tgtgagt----------------------------cattccagtga-att---tttt-gag--cct---g---------------------
i Mus_musculus.chr8                                      C 0 I 13
s Mus_pahari.LT608297.1                                   31351747 52 -  89631738 --------------gcgaagtgt-ttccctgagct-c-----tgtgagt----------------------------cattccagtga-ctt---t-tt-gag--cct---g---------------------
i Mus_pahari.LT608297.1                                  C 0 I 13
s Mus_spretus.CM004101.1                                  90749541 52 - 130317789 --------------gtaaagtgt-ttctctgagct-c-----tgtgagt----------------------------cattccagtga-att---t-tt-aag--cct---g---------------------
i Mus_spretus.CM004101.1                                 C 0 I 13
s Muscardinus_avellanarius.MusAve_scaffold_82313              4219 24 +     14296 ---------------------------------tt-c-----tacaaat----------------------------cattctagtta-act-----------------------------------------
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 13 I 21
s Mustela_putorius.JH418006.1                               299037 44 -  14710649 gcattt-tcct-gtg------------------tt-c-----tatgagt----------------------------t---ctagcaa-att---a-ct-aaa--act---g---------------------
i Mustela_putorius.JH418006.1                            C 0 I 1
s Nasalis_larvatus.k141_413338                               11933 50 +     21681 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------tattctagtga-gtt---t-tg-aca--cct---g---------ca----c----a
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    757725 52 +    783361 acgttt-tcct-gaa------------------tt-c-----tttaaat----------------------------tgtcctagcaa-att---a-cc-ata--cct---g-g-------ga----a----g
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9147339 44 -   9404916 gtgttt-tcct-gag------------------tt-c-----tatgagt----------------------------t---ctagcaa-att---a-ct-gaa--cct---g---------------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 1
s Nycticebus_bengalensis.LG01                            102576653 51 - 196305487 atgttg-ccct-cag------------------tt-c-----taagagt----------------------------catttttgtga-tta---t-tc-aaa--ccc---a---------aa----a----g
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             4339 51 +      8486 atgttg-ccct-cag------------------tt-c-----taagagt----------------------------catttttgtga-tta---t-tc-aaa--ccc---a---------aa----a----g
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105747081 51 + 199412804 atgttg-ccct-cag------------------tt-c-----tatgagt----------------------------catttttgtga-tta---t-tc-aaa--ccc---a---------aa----a----g
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1360504 45 +   3988456 atgttt-ccct-A------------------AATT-A-----TTCAATT----------------------------TCTTCTAGTGA-GAT---T-TC-AAT--CT--------------------------
i Ochotona_princeps.JH802162.1                           C 0 I 6
s Odobenus_rosmarus.KB229312.1                              504425 44 -   2017862 gtgttt-tcct-gag------------------tt-c-----tatgagt----------------------------t---ctagcaa-att---a-ct-gaa--gct---g---------------------
i Odobenus_rosmarus.KB229312.1                           C 0 I 1
s Ondatra_zibethicus.OndZib_scaffold_46174                   21243 52 +     28053 --------------gtaaagtgt-ttcactgagtt-a-----tgtgaat----------------------------cattaaagtga-att---t-tt-aag--cct---g---------------------
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 389
s Onychomys_torridus.OnyTor_scaffold_2986                    76696 52 +    102263 --------------gtaaagtgt-ctccctgagct-c-----tgtaagt----------------------------catgatagtta-aat---t-tt-gag--ctt---g---------------------
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 13
s Otocyon_megalotis.JAEUCK010005147.1                       460094 44 -    559221 gtgttt-tcct-gag------------------tt-c-----tatgagt----------------------------t---ctagcaa-att---a-ct-gaa--cct---g---------------------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 1
s Otolemur_crassicaudatus.k141_222918                          971 51 +      8798 gtattt-cccc-cag------------------tt-c-----tatgagt----------------------------catttttgtga-ttt---t-tc-aaa--ccc---a---------aa----g----g
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             693138 51 -   1103335 GTATTT-CCCC-CAG------------------TT-C-----TATGAgt----------------------------catttttgtga-ttt---t-tc-aaa--CCC---A---------AA----G----G
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    40860 50 +     80009 GC-TTT-CTCT-GAG------------------TT-A-----TGTGAGT----------------------------CATTCTAGTGA-GTT---T-TG-AAA--CCT---G---------CA----G----A
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189139752 50 + 189151597 GC-TTT-CTCT-GAG------------------TT-A-----TGTGAGT----------------------------CATTCTAGTGA-GTT---T-TG-AAA--CCT---G---------CA----A----A
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  149011 43 +    230217 gtattt-tcct-gag------------------tt-c-----tat-agg----------------------------t---ctagcaa-att---a-ct-tta--act---g---------------------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 1
s Panthera_pardus.KV860321.1                                262218 43 +  18783137 gtattt-tcct-gag------------------tt-c-----tat-agg----------------------------t---ctagcaa-att---a-ct-tta--act---g---------------------
i Panthera_pardus.KV860321.1                             C 0 I 1
s Panthera_tigris.KE722367.1                               4718854 43 -   8748460 gtattt-tcct-gag------------------tt-c-----tat-agg----------------------------t---ctagcaa-att---a-ct-tta--act---g---------------------
i Panthera_tigris.KE722367.1                             C 0 I 1
s Papio_anubis.CM001495.2                                183439969 50 + 183742232 GC-TTT-CTGT-GAG------------------TT-C-----TATGAGT----------------------------CATTCTAGTGA-GTT---T-TG-AAA--CCT---G---------CA----C----A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             3662 50 +     20448 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------cattctagtga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20560467 50 +  20919399 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------cattctagtga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   2405 50 +     41871 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------cattctagtga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     5691 50 +     27711 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------cattctagtga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  5770 50 +      9205 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------cattctagtga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10472 44 -     78924 gtgttt-tcca-gaa------------------tt-c-----tatgagc----------------------------t---ttagcaa-att---a-ct-gta--act---g---------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 1
s Perodicticus_ibeanus.k141_855320                            6848 51 +     13100 gtgttt-ccct-cag------------------tt-c-----tatgatt----------------------------cacttttgtga-ctt---t-tc-aaa--cac---a---------aa----g----g
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             5221 51 +     25941 gtgttt-ccct-cag------------------tt-c-----tatgatt----------------------------cacttttgtga-ctt---t-tc-aaa--cac---a---------aa----g----g
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18191294 52 -  18517816 --------------gtaaagtgt-ttccctcagct-c-----tgtaagt----------------------------cattacagtta-att---t-tt-gag--ccc---a---------------------
i Peromyscus_maniculatus.KI615324.1                      C 0 I 13
s Piliocolobus_badius.k141_1234363                           40447 50 +     62158 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------cattctagtga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        35169 50 +     89929 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------cattctagtga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            36585 50 +     51399 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------cattctagtga-gtt---t-tg-aaa--cct---g---------ca----c----a
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14292823 50 -  14605196 GC-TTT-CTGT-GAG------------------TT-C-----TATGAGT----------------------------CATTCTAGTGA-GTT---T-TG-AAA--CCT---G---------CA----C----A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189127894 50 + 189387572 GC-TTT-CTCT-GAG------------------TT-A-----TGTGAGT----------------------------CATTCTAGTGA-GTT---T-TG-AAA--TCT---G---------CA----C----A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9567502 50 +   9816681 gc-ttt-ctct-gag------------------tt-a-----tgtgaat----------------------------cattctagtga-gtt---t-tg-aaa--tct---g---------ca----c----a
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               70097 50 -     81375 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------tattctagtga-gtt---t-tg-aca--cct---g---------ca----c----a
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              1917 50 +     19060 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------tattctagtga-gtt---t-tg-aca--cct---g---------ca----c----a
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2594144 47 -   4620579 -Tgtct-ccct-gag------------------tt-c-----tgtgagt----------------------------cattcttgTGA-ATT---T-TC-AAA--CCT---G---------A-----------
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     988134 48 +   2598838 gtgttt-ccct-gag------------------tt-c-----tgtgagt----------------------------cgtTCTCACGA-GTT---T-TC-AAA--TCT---G---------A-----------
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          26445 48 +     38485 gtgttt-ccct-gag------------------tt-c-----tgtgagt----------------------------cgttctcacga-gtt---t-tc-aaa--tct---g---------a-----------
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             2604 49 +      4256 gtgttt-ccct-gag------------------tt-c-----tgtgagt----------------------------cgttctcacga-att---t-tc-aaa--cct---g---------aa----------
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          23964 49 +     35766 gtgttt-ccct-gag------------------tt-c-----tgtgagt----------------------------cgttctcacga-att---t-tc-aaa--cct---g---------ag----------
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           2146 49 -     24134 gtgttt-ccct-gag------------------tt-c-----tgtgagt----------------------------cgttctcacga-att---t-tc-aaa--cct---g---------ag----------
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        25959 49 -     67325 gtgttt-ccct-gag------------------tt-c-----tgtgagt----------------------------cgttctcacga-att---t-tc-aaa--cct---g---------ag----------
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           2197 48 -      6182 gtgttt-ccct-gag------------------tt-c-----tgtgagt----------------------------cgttctcacga-gtt---t-tc-aaa--tct---g---------a-----------
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             7024 52 -     21651 --------------gggaagtgt-tttcttgagtt-t-----tattagt----------------------------catctcagtga-agt---t-tt-gag--act---g---------------------
i Psammomys_obesus.NESX01036370.1                        C 0 I 12
s Pteronotus_parnellii.KE909381.1                            12529 52 -     21811 acattt-tcct-gaa------------------tt-c-----tccaagt----------------------------tgtcctagcca-att---a-cc-aca--cca---g-g-------ga----a----g
i Pteronotus_parnellii.KE909381.1                        I 10 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         38055 44 +     42204 gcattt-tcct-gag------------------tt-c-----tatgaat----------------------------t---ctagcaa-att---a-ct-gaa--cct---g---------------------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 1
s Pteropus_alecto.KB030862.1                              22974658 17 +  28871421 ---------------------------------TT-C-----TTTAAGT----------------------------TGTTCTT-------------------------------------------------
i Pteropus_alecto.KB030862.1                             I 14 I 9
s Pteropus_vampyrus.KN525825.1                             1357748 17 +   4952924 ---------------------------------TT-C-----TTTAAGA----------------------------TGTTCTT-------------------------------------------------
i Pteropus_vampyrus.KN525825.1                           I 14 I 9
s Puma_concolor.QAVW01001104.1                            20272133 43 -  38429054 gtattt-tcct-gag------------------tt-c-----tat-agg----------------------------t---ctagcaa-att---a-ct-tta--act---g---------------------
i Puma_concolor.QAVW01001104.1                           C 0 I 1
s Pygathrix_cinerea.k141_1153803                             11929 50 -     91421 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------tattctagtga-gtt---t-tg-aca--cct---c---------ca----c----a
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7606057 50 +   7812017 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------tattctagtga-gtt---t-tg-aca--cct---c---------ca----c----a
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11905 50 -     72585 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------tattctagtga-gtt---t-tg-aca--cct---c---------ca----c----a
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53567556 52 +  90668790 --------------ggcaagtat-ttccttgagct-c-----tgtgagt----------------------------cattccagtaa-att---t-tt-gaa--gca---g---------------------
i Rattus_norvegicus.chr16                                C 0 I 13
s Rhinopithecus_bieti.k119_217274                             3612 50 -     11128 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------tattctagtga-gtt---t-tg-aca--cct---g---------ca----c----a
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91232967 50 - 195417433 GC-TTT-CTGT-GAG------------------TT-C-----TATGAGT----------------------------TATTCTAGTGA-GTT---T-TG-ACA--CCT---G---------CA----C----A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7668616 50 +   7961872 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------tattctagtga-gtt---t-tg-aca--cct---g---------ca----c----a
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85651 17 -     96226 ---------------------------------TT-C-----TTTAAGT----------------------------TGTTCGT-------------------------------------------------
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 14 I 9
s Saguinus_bicolor.k141_2619299                               4822 50 -      8359 gc-ttt-ctct-gag------------------tt-c-----taggagt----------------------------cattctagtga-gct---t-tg-aaa--ccc---g---------ca----c----a
i Saguinus_bicolor.k141_2619299                          I 10 C 0
s Saguinus_geoffroyi.k141_1413670                            11130 50 -     13588 gc-ttt-ctct-gag------------------tt-c-----taggagt----------------------------cattctagtga-gct---t-tg-aaa--cgc---g---------cg----c----a
i Saguinus_geoffroyi.k141_1413670                        I 10 C 0
s Saguinus_imperator.k141_717981                              4768 50 -      6207 gc-ttt-ctct-gag------------------tt-c-----taggagt----------------------------cattctagtga-gct---t-tg-aaa--cct---g---------ca----c----a
i Saguinus_imperator.k141_717981                         I 10 C 0
s Saguinus_inustus.k141_699149                               10495 50 +     13640 gc-ttt-ctct-gag------------------tt-c-----taggagt----------------------------cattctagtga-gct---t-tg-aaa--cct---g---------ca----c----a
i Saguinus_inustus.k141_699149                           I 10 C 0
s Saguinus_labiatus.k141_285685                               5358 50 +      8564 gc-ttt-ctct-gag------------------tt-c-----taggagt----------------------------cattctagtga-gct---t-tg-aaa--cct---g---------ca----c----a
i Saguinus_labiatus.k141_285685                          I 10 C 0
s Saguinus_midas.LG03                                    209465635 50 + 209938924 gc-ttt-ctct-gag------------------tt-c-----taggagt----------------------------cattctagtga-gct---t-tg-aaa--ccc---g---------ca----c----a
i Saguinus_midas.LG03                                    I 10 C 0
s Saguinus_mystax.k141_374627                                 4849 50 -      9399 gc-ttt-ctct-gag------------------tt-c-----taggagt----------------------------cattctagtga-gct---t-tg-aaa--cct---g---------ca----c----a
i Saguinus_mystax.k141_374627                            I 11 C 0
s Saguinus_oedipus.k141_63850                                 1995 50 +      3421 gc-ttt-ctct-gag------------------tt-c-----taggagt----------------------------cattctagtga-gct---t-tg-aaa--cgc---g---------cg----c----a
i Saguinus_oedipus.k141_63850                            I 10 C 0
s Saimiri_boliviensis.NW_024100920.1                     119948180 50 - 121099817 GC-TTT-CTCT-GAG------------------TT-C-----TAGGAGT----------------------------CATTCTAGTGA-GCT---T-TG-AAA--CCC---G---------CA----C----A
i Saimiri_boliviensis.NW_024100920.1                     I 10 C 0
s Saimiri_cassiquiarensis.k141_2188234                       20647 50 +     46362 gc-ttt-ctct-gag------------------tt-c-----taggagt----------------------------cattctagtga-gct---t-tg-aaa--ccc---g---------ca----c----a
i Saimiri_cassiquiarensis.k141_2188234                   I 10 C 0
s Saimiri_macrodon.k141_716185                               20742 50 +     45824 gc-ttt-ctct-gag------------------tt-c-----taggagt----------------------------cattctagtga-gct---t-tg-aaa--ccc---g---------ca----c----a
i Saimiri_macrodon.k141_716185                           I 10 C 0
s Saimiri_oerstedii.k141_1487881                             37357 50 -     64574 gc-ttt-ctct-gag------------------tt-c-----taggagt----------------------------cattctagtga-gct---t-tg-aaa--ccc---g---------ca----c----a
i Saimiri_oerstedii.k141_1487881                         I 10 C 0
s Saimiri_sciureus.k141_2278166                                363 50 -     23631 gc-ttt-ctct-gag------------------tt-c-----taggagt----------------------------cattctagtga-gct---t-tg-aaa--ccc---g---------ca----c----a
i Saimiri_sciureus.k141_2278166                          I 10 C 0
s Saimiri_ustus.k141_1484609                                 20635 50 -     61129 gc-ttt-ctct-gag------------------tt-c-----taggagt----------------------------cattctagtga-gct---t-tg-aaa--ccc---g---------ca----c----a
i Saimiri_ustus.k141_1484609                             I 10 C 0
s Semnopithecus_entellus.k141_11662                          16440 50 -     19888 gc-ttt-ctgt-gag------------------tt-c-----tatgagc----------------------------tattctagtga-gtt---t-tg-aca--cct---g---------ca----c----a
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      23642 50 +     39453 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------tattctagtga-gtt---t-tg-aca--cct---g---------ca----c----a
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            4168 50 +     27826 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------tattctagtga-gtt---t-tg-aca--cct---g---------ca----c----a
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             3689 50 -     19483 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------tattctagtga-gtt---t-tg-aca--cct---g---------ca----c----a
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      3751 50 +      7198 gc-ttt-ctgt-gag------------------tt-c-----tatgagc----------------------------tattctagtga-gtt---t-tg-aca--cct---g---------ca----c----a
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         12011 50 +     15514 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------tattctagtga-gtt---t-tg-aca--cct---g---------ca----c----a
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    10717 52 -     12148 --------------gtaaaatgt-ttccctgagct-c-----tgtgagt----------------------------cattacagaga-att---t-tt-gag--act---g---------------------
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 I 11
s Solenodon_paradoxus.SolPar_flattened_line_126               1673 54 +   1910179 gtattt-tcct-aaa------------------tt-c-----t--gagt----------------------------tattctagcaa-att---a-tc-aaa--cct---ga--------gagaaaa----g
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1950179 68 -   3870691 ----------ttaaataaagtgt-ctttatgattt-c-----agggagt----------------------------cattttactga-att---t-tt-gaa--cct---ga-aggaggcag----g----g
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             28580 44 +     97271 gtgttt-tcct-gag------------------tt-c-----tatgagt----------------------------t---cttgcaa-gtt---a-ct-gaa--att---g---------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 1
s Suricata_suricatta.SurSur_flattened_line_6629              16136 44 -    196729 gtgttt-tcct-cag------------------tt-c-----tatgagt----------------------------t---ttagcaa-act---a-ct-gta--act---g---------------------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 1
s Sus_scrofa.JH118708.1                                      33062 53 -     47482 gtgttt-tcct-gag------------------tt-c-----tgtgagt----------------------------tgttctaatga-agt---a-at-aaa--ctg---g--t------gg----g-g--g
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1090217 50 -   1523678 gc-ttt-ctct-gag------------------tt-a-----tgtgagt----------------------------cattctagtga-gtt---t-tg-gga--cct---g---------ca----c----a
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 8511 52 +     41958 acattt-tcct-gag------------------tt-c-----cctaagt----------------------------tcctctagaaa-atg---c-tc-caa--ctg---g-g-------ga----g----g
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      116568 55 -    156842 ttgttt-ccct-gag------------------tt-c-----tgtgagt----------------------------tcttctagcaa-act---a-tt-g-a--ctt---g-g-----a-gg-agtg----g
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    385019 56 +    539355 gtgttt-ccct-gag------------------tt-c-----tgtgagt----------------------------tcttctagcaa-act---a-tt-gaa--ctt---g-g-----a-gg-agtg----g
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               23541 51 +     70052 gcattt-tcct-gag------------------tt-c-----tgcaagt----------------------------tctttgagtga-att---t-tc-aga--cct---g---------ag----g----g
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_2029956                               2886 51 +      4644 gcattt-tcct-gag------------------tt-c-----tgcaagt----------------------------tctttgagtga-att---t-tc-aga--cct---g---------ag----g----g
i Tarsius_wallacei.k141_2029956                          C 0 C 0
s Theropithecus_gelada.CM009954.1                        186425334 50 + 186847797 GC-TTT-CTGT-GAG------------------TT-C-----TATGAGT----------------------------CATTCTAGTGA-GTT---T-TG-AAA--CCT---G---------CA----C----A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          7741 50 -     20410 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------tattctagtga-gtt---t-tg-aca--cct---g---------ca----c----a
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    11936 50 +     15221 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------tattctagtga-gtt---t-tg-aca--cct---g---------ca----c----a
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        7842 50 +     19930 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------tattctagtga-gtt---t-tg-aca--cct---g---------ca----c----a
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       4272 50 -     19997 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------tattctagtga-gtt---t-tg-aca--cct---g---------ca----c----a
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            44392 50 -     60166 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------tattctagtga-gtt---t-tg-aca--cct---g---------ca----c----a
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        11863 50 -     27529 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------tattctagtga-gtt---t-tg-aca--cct---g---------ca----c----a
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     11805 50 -     18194 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------tattctagtga-gtt---t-tg-aca--cct---g---------ca----c----a
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           5539 50 -     21137 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------tattctagtga-gtt---t-tg-aca--cct---g---------ca----c----a
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    4242 50 -     10723 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------tattctagtga-gtt---t-tg-aca--cct---g---------ca----c----a
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         3394 50 +      9834 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------tattctagtga-gtt---t-tg-aca--cct---g---------ca----c----a
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        21709 50 +     32220 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------tattctagtga-gtt---t-tg-aca--cct---g---------ca----c----a
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5935809 50 +   6242583 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------tattccagtga-gtt---t-tg-aca--cct---g---------ca----c----a
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        5057 50 +     20839 gc-ttt-ctgt-gag------------------tt-c-----tatgagt----------------------------tattctagtga-gtt---t-tg-aca--cct---g---------ca----c----a
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2152284 52 +   4065304 gtgttt-tcct-aag------------------ct-c-----tttgagt----------------------------cagtatagtaa-agt---t-tt-gaa--tct---c-------c-ag----a----g
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     5597 52 -     10553 gtgttt-tcct-gag------------------ct-c-----tgtgagt----------------------------cagtatagtga-agt---t-tt-caa--ttt---c-------c-ag----a----g
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4848293 39 -   5085361 -----t-tcct-ggg------------------tt-c-----taggagt----------------------------t---ctagcaa-att---a-ct-gaa--cct---g---------------------
i Ursus_maritimus.KK499267.1                             I 2 I 1
s Varecia_rubra.k141_590885                                   8827 48 +     50397 gtgtat-ccct-gag------------------tt-c-----tgtgagt----------------------------cattcttgtga-att---t-tc-aaa--cct---g---------a-----------
i Varecia_rubra.k141_590885                              C 0 I 1
s Varecia_variegata.k141_1128296                              8881 48 +     24756 gtgtat-ccct-gag------------------tt-c-----tgtgagt----------------------------cattcttgtga-att---t-tc-aaa--cct---g---------a-----------
i Varecia_variegata.k141_1128296                         C 0 I 1
s Vicugna_pacos.KN270157.1                                 5369733 56 -   5488506 gtgttt-tcct-gag------------------tt-c-----cttgagt----------------------------tgtgctagcaa-atc---a-gt-gaa--cct---g-g-------gg----atgggg
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  8747 44 -     43706 gtgttt-tccg-gag------------------tt-c-----tatgagt----------------------------t---ctagcaa-att---a-ct-gaa--cct---g---------------------
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 1
s Xerus_inauris.XerIna_scaffold_48378                        21558 67 -     24430 ----------t-aagtaaagtgt-ttttctgactt-c-----tgggagt----------------------------cattttgctga-att---t-tt-gaa--act---ga-agcgggcag----g----g
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          2981 44 +     86975 atgttt-tcct-gag------------------tt-c-----tatgagt----------------------------t---ctagcaa-att---a-ct-gaa--gct---g---------------------
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 1
s Zapus_hudsonius.ZapHud_scaffold_11398                      12261 48 +     63895 --------------ttcaagtgt-ttcc-tgagtt-c-----tgtgact----------------------------cattatagtga-tttaGTT-TT-C--------------------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 555
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519  0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188  0 +      1777 C
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383  9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   2809  0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 70244  0 +    116680 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Oryctolagus_cuniculus.CM000791.1                        67144574 44 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186890  0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3730 44 -     14121 I
e Lepilemur_ruficaudatus.k141_320948                           604  0 -      1719 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            61949  0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Crocidura_indochinensis.CroInd_scaffold_287352              1624  0 +      4208 I
e Condylura_cristata.JH655891.1                           17547132  5 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            171068  0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15969  0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            5641  0 -      6351 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       3558  9 +     62944 AGGAG-A---TGT
s Acinonyx_jubatus.LLWD01001279.1                           825181  4 -   1699592 ------c---att
i Acinonyx_jubatus.LLWD01001279.1                        I 1 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     67828  5 +     87051 ------a--catg
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 12 I 1
s Ailuropoda_melanoleuca.LNAT01000098.1                    9508427  4 -  29979442 ------t---gtt
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 1 C 0
s Ailurus_fulgens.LNAC01001112.1                             77214  4 -    347723 ------t---gtt
i Ailurus_fulgens.LNAC01001112.1                         I 1 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     70264  5 -     89534 ------A--CATC
i Allactaga_bullata.AllBul_scaffold_9566                 I 2536 I 1179
s Allenopithecus_nigroviridis.k141_3361533                   11485  9 -     52922 aggag-g---tgt
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         11419  9 -     28001 aggag-g---tgt
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          1865  9 -     18505 aggag-g---tgt
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           2714  9 -     12518 aggag-g---tgt
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                               320  9 -     27731 aggag-a---tgt
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                 443  9 +      3134 aggag-a---tgt
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                                581  9 -     45847 aggag-a---tgt
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                21785  9 +     25266 aggag-a---tgt
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                            969  9 +      2906 aggag-a---tgt
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            15082  9 -     18578 aggag-a---tgt
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                               473  9 +     47717 aggag-a---tgt
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                              600  9 -      3544 aggag-a---tgt
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             11819  9 +     50774 aggag-a---tgt
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  12447  9 -     33861 gggag-a---tat
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            12468  9 -     34016 gggag-a---tgt
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4294863  9 -   5030052 GGGAG-A---TGT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             12469  9 -     34685 gggag-a---tat
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               25590  9 -     47192 gggag-a---tat
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       9111  5 +     20879 ------a-a-aat
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        16666  5 +     17124 aagag--------
i Arctocebus_calabarensis.k141_288239                    C 0 I 3
s Avahi_laniger.k141_765380                                  51127  8 -     92717 -gggg-g---cag
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              51756  8 +     85213 -gggg-g---cag
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             2212  9 -     10423 aggag-a---tgt
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             21703  9 +     31915 aggag-a---tgt
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            2182  9 +      5267 aggag-a---tgt
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23587395  9 - 189096842 AGGAG-A---TGT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              8926  9 -     12001 aggag-a---tgt
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10000289  4 -  17673402 ------c---agt
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2332753  4 -   7040546 ------c---agt
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  401029  4 -   1652518 ------c---agt
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17797176  4 -  60362399 ------t---att
i CanFam4.chr16                                          I 1 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    183233  4 -    185531 ------t---att
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 1 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9032619  4 -   9314153 ------t---att
i Canis_lupus_dingo.QKWQ01000480.1                       I 1 C 0
s Canis_lupus_familiaris.chr16                            17956884  4 -  59632846 ------t---att
i Canis_lupus_familiaris.chr16                           I 1 C 0
s Canis_lupus_orion.HG994398.1                            18498184  4 +  63665305 ------t---att
i Canis_lupus_orion.HG994398.1                           I 1 C 0
s Carlito_syrichta.NW_007259797.1                           153484  8 -    496798 AAG-g-g---tgt
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    135559  5 +    179628 ------gg--gtc
i Castor_canadensis.CasCan_scaffold_2074                 I 21 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     90616  7 +    217609 ------cgagggt
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          6836  9 -     11392 aggag-a---tgt
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               2934  9 -      7577 aggag-a---tgt
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         2983  8 +     31688 aag-g-g---tgt
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12229295  4 +  27778364 ------g---agt
i Ceratotherium_simum.JH767749.1                         I 6 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634            322  4 -     25243 ------g---agt
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 6 C 0
s Cercocebus_atys.KQ010504.1                               4472445  9 +   4669795 AGGAG-G---TGT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        10992  9 -     19203 aggag-g---tgt
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           5414  9 +      8260 aggag-g---tgt
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           5641  9 +     27781 aggag-g---tgt
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         5796  9 -     20310 aggag-g---tgt
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           8780  9 +     29689 aggag-g---tgt
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            3208  9 +      9989 aggag-g---tgt
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          11457  9 -     27936 aggag-g---tgt
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                             329  9 -     17152 aggaa-g---tgt
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38813862  9 +  39242232 aggag-g---tgt
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21219558  9 -  21565898 aggaa-g---tgt
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       36677  9 -     53127 aggaa-g---tgt
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        3963  9 +      7159 aggag-g---tgt
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       11480  9 -     27947 aggaa-g---tgt
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         11453  9 +     17596 aggaa-g---tgt
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                           678  9 +     26000 aggag-g---tgt
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             18555  8 -     52598 -gggg-g---cag
i Cheirogaleus_major.k141_333249                         I 2 C 0
s Cheirogaleus_medius.k141_1055463                           13905  8 +     57038 -gggg-g---cag
i Cheirogaleus_medius.k141_1055463                       I 2 C 0
s Chiropotes_albinasus.k141_2813271                           7847  9 +     11226 agcag-a---tgt
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18425418  9 -  18827391 aggag-g---tgt
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       11859  9 -     50209 aggag-g---tgt
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135418865  9 + 135778131 AGGAG-G---Tgt
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1907381  9 +   2368649 AGGAg-g---tgt
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199947053  9 + 200372422 aggag-g---tgt
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              33925  9 +     84244 aggag-g---tgt
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          11864  3 -     20389 ------t---a-t
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 9 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 47537  1 +     63868 ------a------
i Cricetomys_gambianus.CriGam_scaffold_18520             I 9 C 0
s Cricetulus_griseus.LT883664.1                           11664870  5 + 224834208 ------a--catc
i Cricetulus_griseus.LT883664.1                          I 11 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_16129             26351  4 -     87169 ------c---att
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 1 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    834635  1 +   1526836 ------a------
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 2
s Daubentonia_madagascariensis.ctg71                      12534731  9 -  12879189 acgag-a---gat
i Daubentonia_madagascariensis.ctg71                     I 1 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  671147  4 +   1390856 ------g---agt
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 6 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    3903  4 +    198055 ------g---agt
i Diceros_bicornis.DicBicMic_scaffold_5955               I 6 C 0
s Eidolon_helvum.KE759718.1                                   8409  3 +     11740 ------a---a-t
i Eidolon_helvum.KE759718.1                              I 9 C 0
s Ellobius_lutescens.LOEQ01008920.1                          17058  5 -    110024 ------a--catc
i Ellobius_lutescens.LOEQ01008920.1                      I 13 I 1
s Ellobius_talpinus.LOJH01109367.1                            3112  5 -      6299 ------a--catc
i Ellobius_talpinus.LOJH01109367.1                       I 13 I 1
s Enhydra_lutris.KZ291758.1                               16327193  4 -  41312741 ------t---gtt
i Enhydra_lutris.KZ291758.1                              I 1 C 0
s Equus_asinus.JREZ01000139.1                              1281201  4 +   4378816 ------g---tgt
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18529021  4 -  39960074 ------g---tat
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               31036  4 +    498745 ------g---tat
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21202060  9 -  21539334 aggag-g---tgt
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              11237  9 -     14127 -ggggag---cgg
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                3935  9 -     16928 -ggggag---cgg
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              12968  9 -     25546 -ggggag---tgg
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            10153  9 +     26330 -ggggag---cgg
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 11401  9 +     23973 -ggggag---cgg
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                10153  9 +     75513 -ggggag---cgg
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  8104  9 +     97555 -ggggag---cag
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            11032  9 +     26496 -ggggag---cgg
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  1637  9 -     17153 -ggggag---cgg
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              11213  9 +    111500 -ggggag---cgg
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20235047  4 + 206538554 ------c---att
i Felis_catus.CM001381.2                                 I 1 C 0
s Felis_catus_fca126.CM031415.1                           20193891  4 + 205367284 ------c---att
i Felis_catus_fca126.CM031415.1                          I 1 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  7403  4 -     36744 ------c---att
i Felis_nigripes.FelNig_flattened_line_20823             I 1 C 0
s Galago_moholi.ctg2040                                     423487  5 -    453645 GGGAG--------
i Galago_moholi.ctg2040                                  C 0 I 3
s Galago_senegalensis.k141_631886                             1194  5 +     11339 GGGAG--------
i Galago_senegalensis.k141_631886                        C 0 I 3
s Galagoides_demidoff.k141_1959596                            4994  5 +      6795 gggag--------
i Galagoides_demidoff.k141_1959596                       C 0 I 3
s Galeopterus_variegatus.GalVar_scaffold_266699               1696  9 +      2098 gggga-g---ggt
i Galeopterus_variegatus.GalVar_scaffold_266699          C 0 C 0
s Gorilla_beringei.k141_3596273                              12792  9 -     32273 aagag-a---tgt
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186334940  9 + 186649187 aggag-a---tgt
i Gorilla_gorilla.LT578341.1                             C 0 I 127
s Hapalemur_alaotrensis.k141_170648                           4293 10 -     19426 -gggg-gga-cgg
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              9437 10 -     15286 -gggg-gga-cgg
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             11075 10 +     18253 -gggg-gga-cgg
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         11178 10 -     41752 -gggg-gga-cgg
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         11015 10 -     16460 -gggg-gga-cgg
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               240184  4 +    327341 ------c---att
i Helogale_parvula.HelPar_flattened_line_2585            I 1 C 0
s Hipposideros_armiger.JXIK01000431.1                       109686  3 +   1711038 ------t---g-t
i Hipposideros_armiger.JXIK01000431.1                    I 12 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               41108  3 +     43066 ------t---g-t
i Hipposideros_galeritus.HipGal_scaffold_29171           I 9 C 0
s Hoolock_leuconedys.ctg274                                    431635  9 +    630532 aagag-g---tgt
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  42328  4 +     55795 ------c---att
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 1 C 0
s Hylobates_agilis.k141_307679                               14569  9 -     15490 aagag-g---tgt
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              56575  9 +     67168 aagag-g---tgt
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189540225  9 - 191637585 aagag-g---tgt
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3333119  9 -  11177569 aagag-g---tgt
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7517163  5 -   7955117 ------ag--aat
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   19984  8 +     31101 -tggg-g---tgg
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15521540 10 -  30322482 -gagg-gga-cag
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        4617  9 +     64341 agcag-a---tgt
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           1677  9 +      4941 agcag-a---tgt
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4545  9 +     35603 agcag-a---tgt
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    25973  9 +     38576 aggag-a---tgt
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         22670  9 +     66356 aggag-a---tgt
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          8429  9 -     23766 -gggg-g-a-cgg
i Lepilemur_ankaranensis.k141_596936                     C 0 I 31
s Lepilemur_dorsalis.k141_577674                             26376  9 +     45836 -gggg-g-a-cgg
i Lepilemur_dorsalis.k141_577674                         C 0 I 31
s Lepilemur_septentrionalis.k141_185316                      24431  9 +     54090 -gggg-g-a-cgg
i Lepilemur_septentrionalis.k141_185316                  C 0 I 31
s Leptonychotes_weddellii.KB714746.1                       3040327  4 +   3914936 ------t---gtt
i Leptonychotes_weddellii.KB714746.1                     I 1 C 0
s Lycaon_pictus.CM007581.1                                17953124  4 -  59628241 ------t---att
i Lycaon_pictus.CM007581.1                               I 1 C 0
s Lophocebus_aterrimus.ctg367                              1433990  5 +   1826925 aggag--------
i Lophocebus_aterrimus.ctg367                            C 0 I 4
s Loris_lydekkerianus.k141_2539221                            2892  5 +     11245 gggag--------
i Loris_lydekkerianus.k141_2539221                       C 0 I 3
s Loris_tardigradus.ctg83                                  1001730  5 +   6120653 gggag--------
i Loris_tardigradus.ctg83                                C 0 I 3
s Macaca_arctoides.k141_2326796                               3811  9 +     40492 aggag-g---tgt
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59673065  9 +  60120075 aggag-g---tgt
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  9567  9 -     26193 aggag-g---tgt
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            77363  9 -    114318 aggag-g---tgt
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  3078  9 -     23192 aggag-g---tgt
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                12530  9 -     29190 aggag-g---tgt
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  21098  9 +     37952 aggag-g---tgt
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186836186  9 + 187317192 AGGAG-G---TGT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25454749  9 -  25927173 AGGAG-G---TGT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  76947  9 +     89720 aggag-g---tgt
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 3944  9 +     20474 aggag-g---tgt
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   3746  9 -     14993 aggag-g---tgt
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  326616  9 -    668171 aggag-g---tgt
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 2048  9 -     24072 aggag-g---tgt
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               22685  9 -     45290 aggag-g---tgt
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88485  3 +     94391 ------a---a-t
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 9 C 0
s Mandrillus_leucophaeus.scaffold280                      23934264  9 -  24302211 aggag-g---tgt
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               348397  9 +    752769 aggag-g---tgt
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              17342  4 +    737560 ------g---agt
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              48727  4 -    317179 ------g---agt
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33099475  5 -  40650429 ------ag--aat
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         8210  3 -    207569 ------t---a-t
i Megaderma_lyra.MegLyr_scaffold_4542                    I 9 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              7901  4 +     13704 ------t---gtt
i Mellivora_capensis.MelCap_flattened_line_69365         I 1 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 29437  5 +    140813 ------a--catc
i Meriones_unguiculatus.MerUng_scaffold_7390             I 12 I 1
s Mesocricetus_auratus.KB708134.1                         12179943  5 -  29670104 ------a--catc
i Mesocricetus_auratus.KB708134.1                        I 14 I 1
s Mico_argentatus.k141_1239457                                2758  9 -      7380 aggag-a---tgt
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               1828  9 +     18990 aggag-a---tgt
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      2763  9 -      7356 aggag-a---tgt
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18288928  8 -  93316391 -GGGG-G---TGG
i Microcebus_murinus.CM007674.1                          I 1 C 0
s Microtus_ochrogaster.CM001695.1                         11257567  5 -  27267610 ------A--CATC
i Microtus_ochrogaster.CM001695.1                        I 368 I 1
s Miopithecus_ogouensis.k141_534055                           5986  9 -     28506 aggag-g---tgt
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         3164  4 -      8324 ------t---gtt
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 1 C 0
s Mirza_zaza.k141_952172                                      6497  8 -     37649 -gggg-g---tgg
i Mirza_zaza.k141_952172                                 I 1 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 139187  4 -    366855 ------a---att
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   33287  4 +     37127 ------c---att
i Mungos_mungo.MunMun_flattened_line_23663               I 1 C 0
s Mus_caroli.LT608237.1                                   84358539  5 - 120012414 ------t--catc
i Mus_caroli.LT608237.1                                  I 13 I 1
s Mus_musculus.chr8                                       87647528  5 - 129401213 ------t--catc
i Mus_musculus.chr8                                      I 13 I 1
s Mus_pahari.LT608297.1                                   31351812  5 -  89631738 ------t--catc
i Mus_pahari.LT608297.1                                  I 13 I 1
s Mus_spretus.CM004101.1                                  90749606  5 - 130317789 ------t--catc
i Mus_spretus.CM004101.1                                 I 13 I 1
s Muscardinus_avellanarius.MusAve_scaffold_82313              4264  5 +     14296 ------gg--gtt
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 21 C 0
s Mustela_putorius.JH418006.1                               299082  4 -  14710649 ------t---gtt
i Mustela_putorius.JH418006.1                            I 1 C 0
s Nasalis_larvatus.k141_413338                               11983  9 +     21681 aggag-g---tgt
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    757777  4 +    783361 ------a---att
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9147384  4 -   9404916 ------t---att
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 1 C 0
s Ochotona_princeps.JH802162.1                             1360555  4 +   3988456 ------A---AGT
i Ochotona_princeps.JH802162.1                           I 6 C 0
s Odobenus_rosmarus.KB229312.1                              504470  4 -   2017862 ------t---gtt
i Odobenus_rosmarus.KB229312.1                           I 1 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   21684  5 +     28053 ------a--catc
i Ondatra_zibethicus.OndZib_scaffold_46174               I 389 I 1
s Onychomys_torridus.OnyTor_scaffold_2986                    76761  5 +    102263 ------a--catc
i Onychomys_torridus.OnyTor_scaffold_2986                I 13 I 1
s Otocyon_megalotis.JAEUCK010005147.1                       460139  4 -    559221 ------t---att
i Otocyon_megalotis.JAEUCK010005147.1                    I 1 C 0
s Nycticebus_bengalensis.LG01                            102576704  5 - 196305487 gggag--------
i Nycticebus_bengalensis.LG01                            C 0 I 3
s Nycticebus_coucang.k141_5327727                             4390  5 +      8486 gggag--------
i Nycticebus_coucang.k141_5327727                        C 0 I 3
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105747132  5 + 199412804 gggag--------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 3
s Otolemur_crassicaudatus.k141_222918                         1022  5 +      8798 gggag--------
i Otolemur_crassicaudatus.k141_222918                    C 0 I 3
s Otolemur_garnettii.GL873799.1                             693189  5 -   1103335 GGGAG--------
i Otolemur_garnettii.GL873799.1                          C 0 I 3
s Pan_paniscus.KQ411613.1                                    40910  9 +     80009 AGGAG-A---TGT
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189139802  9 + 189151597 AGGAG-A---TGT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  149055  4 +    230217 ------c---att
i Panthera_onca.PanOnc_flattened_line_3271               I 1 C 0
s Panthera_pardus.KV860321.1                                262262  4 +  18783137 ------c---att
i Panthera_pardus.KV860321.1                             I 1 C 0
s Panthera_tigris.KE722367.1                               4718898  4 -   8748460 ------c---att
i Panthera_tigris.KE722367.1                             I 1 C 0
s Papio_anubis.CM001495.2                                183440019  9 + 183742232 AGGAG-G---TGT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             3712  9 +     20448 aggag-g---tgt
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20560517  9 +  20919399 aggag-g---tgt
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   2455  9 +     41871 aggag-g---tgt
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     5741  9 +     27711 aggag-g---tgt
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  5820  9 +      9205 aggag-g---tgt
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10517  4 -     78924 ------c---att
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 1 C 0
s Peromyscus_maniculatus.KI615324.1                       18191359  5 -  18517816 ------a--catc
i Peromyscus_maniculatus.KI615324.1                      I 13 I 1
s Perodicticus_ibeanus.k141_855320                            6899  5 +     13100 aggag--------
i Perodicticus_ibeanus.k141_855320                       C 0 I 3
s Perodicticus_potto.k141_1092580                             5272  5 +     25941 aggag--------
i Perodicticus_potto.k141_1092580                        C 0 I 3
s Piliocolobus_badius.k141_1234363                           40497  9 +     62158 aggag-g---tgt
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        35219  9 +     89929 aggag-g---tgt
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            36635  9 +     51399 aggag-g---tgt
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14292873  9 -  14605196 AGGag-g---tgt
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189127944  9 + 189387572 AGGAG-G---TGT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9567552  9 +   9816681 aggag-g---tgt
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               70147  9 -     81375 aggag-g---tgt
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              1967  9 +     19060 aggag-g---tgt
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2594191 10 -   4620579 -GGGG-G-GATGG
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     988182  8 +   2598838 -GGGG-G---CGG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          26493  8 +     38485 -gggg-g---cgg
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             2653  8 +      4256 -gggg-g---cgg
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          24013  8 +     35766 -gggg-g---cgg
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           2195  8 -     24134 -gggg-g---cgg
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        26008  8 -     67325 -gggg-g---cag
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           2245  8 -      6182 -gggg-g---cgg
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             7088  5 -     21651 ------a--catc
i Psammomys_obesus.NESX01036370.1                        I 12 I 1
s Pteronotus_parnellii.KE909381.1                            12581  4 -     21811 ------a---agt
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         38100  4 +     42204 ------t---gtt
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 1 C 0
s Pteropus_alecto.KB030862.1                              22974684  3 +  28871421 ------a---a-t
i Pteropus_alecto.KB030862.1                             I 9 C 0
s Pteropus_vampyrus.KN525825.1                             1357774  3 +   4952924 ------a---a-t
i Pteropus_vampyrus.KN525825.1                           I 9 C 0
s Puma_concolor.QAVW01001104.1                            20272177  4 -  38429054 ------c---att
i Puma_concolor.QAVW01001104.1                           I 1 C 0
s Pygathrix_cinerea.k141_1153803                             11979  9 -     91421 aggag-g---tgt
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7606107  9 +   7812017 aggag-g---tgt
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11955  9 -     72585 aggag-g---tgt
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53567621  5 +  90668790 ------a--catc
i Rattus_norvegicus.chr16                                I 13 I 1
s Rhinopithecus_bieti.k119_217274                             3662  9 -     11128 aggag-g---tgt
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91233017  9 - 195417433 AGGAG-G---TGT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7668666  9 +   7961872 aggag-g---tgt
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85677  3 -     96226 ------a---a-t
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 9 C 0
s Saguinus_bicolor.k141_2619299                               4872  9 -      8359 agcag-a---tgt
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            11180  9 -     13588 agcaa-a---tgt
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              4818  9 -      6207 agcag-a---tgt
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               10545  9 +     13640 agcag-a---tgt
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               5408  9 +      8564 agcag-a---tgt
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209465685  9 + 209938924 agcag-a---tgt
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 4899  9 -      9399 agcag-a---tgt
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 2045  9 +      3421 agcaa-a---tgt
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119948230  9 - 121099817 AGGAG-A---TGT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       20697  9 +     46362 aggag-a---tgt
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               20792  9 +     45824 aggag-a---tgt
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             37407  9 -     64574 atgag-a---tgt
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                                413  9 -     23631 aggag-a---tgt
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 20685  9 -     61129 aggag-a---tgt
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          16490  9 -     19888 aggag-g---tgt
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      23692  9 +     39453 aggag-g---tgt
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            4218  9 +     27826 aggag-g---tgt
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             3739  9 -     19483 aggag-g---tgt
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      3801  9 +      7198 aggag-g---tgt
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         12061  9 +     15514 aggag-g---tgt
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    10780  5 -     12148 ------g--catc
i Sigmodon_hispidus.SigHis_scaffold_60841                I 11 I 1
s Solenodon_paradoxus.SolPar_flattened_line_126               1727  4 +   1910179 ------a---gat
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 3
s Spermophilus_dauricus.KZ294078.1                         1950247  5 -   3870691 ------ag--aat
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             28625  4 +     97271 ------t---gtt
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 1 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              16181  4 -    196729 ------c---att
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 C 0
s Sus_scrofa.JH118708.1                                      33115  4 -     47482 ------t---tat
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1090267  9 -   1523678 aagag-g---tgt
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 8563  4 +     41958 ------a---att
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      116623  4 -    156842 ------g---ggt
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    385075  4 +    539355 ------g---ggt
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               23592  8 +     70052 aag-g-g---tgt
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_2029956                               2937  8 +      4644 aag-g-g---tgt
i Tarsius_wallacei.k141_2029956                          C 0 C 0
s Theropithecus_gelada.CM009954.1                        186425384  9 + 186847797 AGGAG-G---TGT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          7791  9 -     20410 aggag-g---tgt
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    11986  9 +     15221 aggag-g---tgt
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        7892  9 +     19930 aggag-g---tgt
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       4322  9 -     19997 aggag-g---tgt
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            44442  9 -     60166 aggag-g---tgt
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        11913  9 -     27529 aggag-g---tgt
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     11855  9 -     18194 aggag-g---tgt
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           5589  9 -     21137 aggag-g---tgt
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    4292  9 -     10723 aggag-g---tgt
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         3444  9 +      9834 aggag-g---tgt
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        21759  9 +     32220 aggag-g---tgt
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5935859  9 +   6242583 aggag-g---tgt
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        5107  9 +     20839 aggag-g---tgt
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2152336  4 +   4065304 ------a---tgt
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     5649  4 -     10553 ------a---tgt
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4848333  4 -   5085361 ------t---gtt
i Ursus_maritimus.KK499267.1                             I 1 C 0
s Varecia_rubra.k141_590885                                   8876  8 +     50397 -gggg-g---cgg
i Varecia_rubra.k141_590885                              I 1 C 0
s Varecia_variegata.k141_1128296                              8930  8 +     24756 -gggg-g---cgg
i Varecia_variegata.k141_1128296                         I 1 C 0
s Vicugna_pacos.KN270157.1                                 5369789  4 -   5488506 ------c---agt
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  8792  4 -     43706 ------t---att
i Vulpes_lagopus.VulLag_flattened_line_30954             I 1 C 0
s Xerus_inauris.XerIna_scaffold_48378                        21625  4 -     24430 ------a---aat
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          3026  4 +     86975 ------t---gtt
i Zalophus_californianus.ZalCal_flattened_line_17732     I 1 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      12864  5 +     63895 ------A--CACC
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 555 I 338
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519  0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188  0 +      1777 C
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383  9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   2809  0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 70244  0 +    116680 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Oryctolagus_cuniculus.CM000791.1                        67144574 44 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186890  0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3730 44 -     14121 I
e Lepilemur_ruficaudatus.k141_320948                           604  0 -      1719 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8273763 2322 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   31989  4 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            61949  0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Crocidura_indochinensis.CroInd_scaffold_287352              1624  0 +      4208 I
e Condylura_cristata.JH655891.1                           17547132  5 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            171068  0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15969  0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            5641  0 -      6351 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       3567 108 +     62944 CA--AG--------G-G-----AA----------------------------CCTCCAGATTTAGGAGATGTCAAGGGAGCCTCC-------A-GA-T--TTGTAGTCAG-CCAGA-C-AAAAAT----GTGG-GTA--GC----------------------------CTGGCAT-C-TGAAAT----GGA--GACA-GTCT-TG--T-GGA-A
s Acinonyx_jubatus.LLWD01001279.1                           825185  96 -   1699592 ca--tg--------g-g-----aa----------------------------tccc-----------------------------------ca-gt-t--ttatagtcag-----g-gcagaaat----gtgggt-a--gt--ct--gag-c-agcccc-cgt--ggggctgg-catc-tgaagt----gaa--gaca-gtc--tt--t-tgata
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     67834  45 +     87051 ----ta--------t-g-----ta----------------------------cctct-----------------------------------c-aa-a--atttatccag-ccagt-c-agaaat----gtaa-gta--g---------------------------------------------------------------------------
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 1 I 93
s Ailuropoda_melanoleuca.LNAT01000098.1                    9508431  99 -  29979442 ca--tg--------a-g-----aa----------------------------tccc-----------------------------------ca-ca-t--ttatagccat-c-agg-gcagaaat----gtgggt-a--gc--ct--gag-t-a-ctcc-attt-gtggctgg-tatc-tgaagt----gga--gaca-gtc--tt--a-tggta
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             77218  99 -    347723 ca--tg--------g-g-----aa----------------------------tccc-----------------------------------ca-aa-t--ttacagccag-c-agg-gcagaaat----gtgggt-a--gc--ct--gag-t-a-cccc-attt-gtggctgg-catc-tgaagt----gga--gata-gtc--tt--a-gagta
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     71448  98 -     89534 ca--ta--------g-g-----ac----------------------------cccct-----------------------------------c-ag-a--ttttatttag-ctaga-c-agaaat----gtag-gta--g-a-ct--gtg-c-a-ccct-attt-gtggctgacct-c-taaagt------a-cagca-gtct-tt--t-ggg-a
i Allactaga_bullata.AllBul_scaffold_9566                 I 1179 C 0
s Allenopithecus_nigroviridis.k141_3361533                   11494  99 -     52922 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-tga-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg--t-gga-a
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         11428  99 -     28001 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-tga-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg--t-gga-a
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          1874  99 -     18505 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-tga-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg--t-gga-a
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           2723  99 -     12518 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-tga-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg--t-gga-a
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                               329  99 -     27731 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttgtagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-c-a-accc-atgt-gtggctgccat-c-tgaagt----gga--ggca-gtct-tg--t-gga-a
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                 452  99 +      3134 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttgtaatcag-ccagg-c-aaaaat----gtgg-gta--gc--cc--ggg-c-a-accc-atgt-gtggctgccat-c-tgaagt----gga--ggca-gtct-tg--t-gga-a
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                                590  99 -     45847 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttgtaatcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-c-a-accc-atgt-gtggctgccat-c-tgaagt----gga--ggca-gtct-tg--t-gga-a
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                21794  99 +     25266 ca--ag--------g-g-----aa----------------------------actcc-----------------------------------a-aa-t--ttgtagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-c-a-accc-atgt-gtggctgccat-c-tgaagt----gga--ggca-gtct-tg--t-gga-a
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                            978  99 +      2906 ca--ag--------g-g-----aa----------------------------actcc-----------------------------------a-aa-t--ttgtagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-c-a-accc-atgt-gtggctgccat-c-tgaagt----gga--ggca-gtct-tg--t-gga-a
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            15091  99 -     18578 ca--ag--------g-g-----aa----------------------------actcc-----------------------------------a-aa-t--ttgtagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-c-a-accc-atgt-gtggctgccat-c-tgaagt----gga--ggca-gtct-tg--t-gga-a
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                               482  97 +     47717 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttgtagtcag-gcagg-c-aaaaat----gtgg-gta--gc--ct--ggg-c-a-accc-gt---gtggctgccat-c-tgaagt----gga--ggca-gtct-tg--t-gga-a
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                              609  99 -      3544 ca--ag--------g-g-----aa----------------------------actcc-----------------------------------a-aa-t--ttgtagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-c-a-accc-atgt-gtggctgccat-c-tgaagt----gga--ggca-gtct-tg--t-gga-a
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             11828  99 +     50774 ca--ag--------g-g-----aa----------------------------actcc-----------------------------------a-aa-t--ttgtagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-c-a-accc-atgt-gtggctgccat-c-tgaagt----gga--ggca-gtct-tg--t-gga-a
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  12456  99 -     33861 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ctgtagtcag-tcagg-c-aaaaat----gtgg-gta--gc--ct--ggg-c-a-accc-attt-gtggctgccat-c-tgaagt----gga--ggca-gtct-tg--t-gga-a
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            12477  99 -     34016 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ctgtagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-c-a-accc-attt-gtggctgccat-c-tgaagt----gga--ggca-gtct-tg--t-gga-a
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4294872  99 -   5030052 CA--AG--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ctgtagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-c-a-accc-attt-gtggctgccat-c-tgaagt----gga--ggca-gtct-tg--t-gga-a
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             12478  99 -     34685 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ctgtagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-c-a-accc-attt-gtggctgccat-c-tgaagt----gga--ggca-gtct-tg--t-gga-a
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               25599  99 -     47192 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ctgtagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-c-a-accc-attt-gtggctgccat-c-tgaagt----gga--ggca-gtct-tg--t-gga-a
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       9116  99 +     20879 ca--ta--------g-g-----ag----------------------------acctt-----------------------------------a-ca-t--ttgtagtcag-ccag-ac-agaaac----atgg-gta--g-c-cc--att-c-a-tcct-ctat-ggggttggcct-c-tgatgt----gga--atcc-aact-tg--t-agg-a
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        16674  98 +     17124 ta--tg--------g-g-----ga----------------------------ccttc-----------------------------------a-ac-t--tagtaaccag-ccatg-a-aaaa-a----gagg-ata--ac--ct--gag-c-a-ctcc-actt-gtacctggcac-c-tgatgt----ggg--caca-gtct-tg--t-gca-a
i Arctocebus_calabarensis.k141_288239                    I 3 C 0
s Avahi_laniger.k141_765380                                  51135  99 -     92717 tt--gt--------g-g-----ga----------------------------acccc-----------------------------------aaaa-t--ttgtagtc-c-ccagg-a-agaaat----gtgg-gta--gc--ct--ggg-c-a-cccc-attt-ggggctggcat-c-tgaagt----ggg--agca-tttt-tg--t-gag-g
i Avahi_laniger.k141_765380                              C 0 I 1
s Avahi_peyrierasi.k141_1424874                              51764  99 +     85213 tt--gt--------g-g-----ga----------------------------acccc-----------------------------------aaaa-t--ttgtagtc-c-ccagg-a-agaaat----gtgg-gta--gc--ct--ggg-c-a-cccc-attt-ggggctggcat-c-tgaagt----ggg--agca-tttt-tg--t-gag-g
i Avahi_peyrierasi.k141_1424874                          C 0 I 1
s Callibella_humilis.k141_1278103                             2221 102 -     10423 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttgttgtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-c-a-acct-gttt-gtg-ctgccat-c-tgaggtggaggga--ggca-gtct-tg--t-gga-a
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             21712 103 +     31915 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttgtggtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-c-a-accc-gttt-gtggctgccat-c-tgaagcggaggga--ggca-gtct-tg--t-gga-a
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            2191 102 +      5267 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttgttgtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-c-a-accc-attt-gtg-ctgccat-c-tgaggtggaggga--ggca-gtct-tg--t-gga-a
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23587404 102 - 189096842 CA--AG--------G-G-----AA----------------------------CCTCC-----------------------------------A-AA-T--TTGTTGTCAG-CCAGG-C-AAAAAT----GTGG-GTA--GC---C--TGG-G-C-AACC-CGTT-TGTGCTGCCAT-C-TGAGGTGGAGGGA--GGCA-GTCT-TG--T-GGA-A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              8935 102 -     12001 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttgttgtcag-caagg-c-aaatat----gtgg-gta--gc--ct--ggg-c-a-accc-gttt-gtg-ctgccat-c-tgaggtggaggga--ggca-gtct-tg--t-gga-a
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10000293  99 -  17673402 ga--tg--------g-g-----aa----------------------------accc-----------------------------------tg-aa-t--ttgtagtcat-c-agg-gcagaagt----gtgggt-a--gc--ct--gag-c-a-tccc-attt-gtggctgg-tgtc-tgaaga----gaa--agca-gtc-ttg--t-ggg-a
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2332757  99 -   7040546 ga--tg--------g-g-----aa----------------------------accc-----------------------------------tg-aa-t--ttgtagtcat-c-agg-gcagaagt----gtgggt-a--gc--ct--gag-c-a-tccc-attt-gtggctgg-tgtc-tgaaga----gaa--agca-gtc-ttg--t-ggg-a
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  401033  99 -   1652518 ga--tg--------g-g-----aa----------------------------accc-----------------------------------tg-aa-t--ttgtagtcat-c-agg-gcagaagt----gtgggt-a--gc--ct--gag-c-a-tccc-attt-gtggctgg-tgtc-tgaaga----gaa--agca-gtc-ttg--t-ggg-a
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17797180  99 -  60362399 ca--tg--------g-g-----aa----------------------------tccc-----------------------------------ca-aa-c--ttatagccag-c-agg-gcaaaaat----gtgggt-a--gc--ct--gag-t-a-cc-tcattt-gtggctgg-catc-tgaagt----gga--gaca-gtc--tt--a-tggta
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    183237  99 -    185531 ca--tg--------g-g-----aa----------------------------tccc-----------------------------------ca-aa-c--ttatagccag-c-agg-gcaaaaat----gtgggt-a--gc--ct--gag-t-a-cc-tcattt-gtggctgg-catc-tgaagt----gga--gaca-gtc--tt--a-tggta
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9032623  99 -   9314153 ca--tg--------g-g-----aa----------------------------tccc-----------------------------------ca-aa-c--ttatagccag-c-agg-gcaaaaat----gtgggt-a--gc--ct--gag-t-a-cc-tcattt-gtggctgg-catc-tgaagt----gga--gaca-gtc--tt--a-tggta
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17956888  99 -  59632846 ca--tg--------g-g-----aa----------------------------tccc-----------------------------------ca-aa-c--ttatagccag-c-agg-gcaaaaat----gtgggt-a--gc--ct--gag-t-a-cc-tcattt-gtggctgg-catc-tgaagt----gga--gaca-gtc--tt--a-tggta
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18498188  99 +  63665305 ca--tg--------g-g-----aa----------------------------tccc-----------------------------------ca-aa-c--ttatagccag-c-agg-gcaaaaat----gtgggt-a--gc--ct--gag-t-a-cc-tcattt-gtggctgg-catc-tgaagt----gga--gaca-gtc--tt--a-tggta
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           153492  99 -    496798 cg--tg--------a-a-----ga----------------------------cctcc-----------------------------------a-aa-t--gtgtaggcat-ccagg-c-aaaaat----gtga-gta--at--ct--g-g-ata-cccc-attt-gtggctggcat-c-tgacgt----GGG--AGAA-ATCT-TG--G-CGG-A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    135564  71 +    179628 at--aa--------g-a-----aa----------------------------tcctc-----------------------------------t-aa-t--ttatagcaaatgtgg--c-agaaat----gtga-ata--g-a-ct--gtg-t-a-tcct-attt-gtggctgg------------------------------------------
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 13
s Catagonus_wagneri.CatWag_scaffold_2839                     90623  98 +    217609 ca--tg--------g-g-----aa----------------------------accc-----------------------------------tg-aa-t--ttgtagtcaa-c-agg-gcagaaat----gtgggt-g--ac--ct--gag-t-a-cccc-attt-atggctgc-ag-c-tgaaga----gaa--aaca-gcc-ttg--t-ggg-a
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          6845 102 -     11392 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttgttgtcag-tcagg-c-aaaaat----gtgg-gta--gc--ct--ggg-c-a-accc-gttt-gtg-ctgccat-c-tgaggtggaggga--ggca-gtct-tg--t-gga-a
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               2943 102 -      7577 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttgttgtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-c-a-acct-gttt-gtg-ctgccat-c-tgaggtggaggga--ggca-gtct-tg--t-gga-a
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         2991  99 +     31688 cg--tg--------a-a-----ga----------------------------cctcc-----------------------------------a-aa-t--gtgtaggcat-ccagg-c-aaaaat----gtga-gta--at--ct--g-g-ata-cccc-attt-gtggctggcat-c-tgacgt----ggg--agaa-atct-tg--g-cgg-a
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12229299  99 +  27778364 ca--ta--------g-g-----aa----------------------------cccc-----------------------------------aa-ag-t--ttgtagtcag-c-agg-gcagaaat----gtgcgt-a--gc--ct--gag-c-a-ctcc-attt-gtggctgg-cgtc-tgacgt----aga--ggca-gtc-tta--t-ggg-a
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634            326  99 -     25243 ca--ta--------g-g-----aa----------------------------cccc-----------------------------------aa-ag-t--ttgtagtcag-c-agg-gcagaaat----gtgcgt-a--gc--ct--gag-c-a-ctcc-attt-gtggctgg-cgtc-tgacgt----aga--ggca-gtc-tta--t-ggg-a
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4472454  98 +   4669795 CA--AG--------G-A-----AA----------------------------CCTCC-----------------------------------A-GA-T--TTATAGTCAG-CCAGG-C-AAAAAT----GTGG-GTA--GC---C--TGG-G-T-GACC-ATTT-GTGGCTGGGAT-C-TGAAGT----GGA--GGCA-GTGC-TG--T-GGA-A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        11001  98 -     19203 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-ga-t--ttatagtcag-tcagg-c-aaaaat----gtgg-gta--gc--ct--ggg-tga-cc---attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg--t-gga-a
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           5423  98 +      8260 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-ga-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-tga-cc---attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg--t-gga-a
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           5650  98 +     27781 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-ga-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-tga-cc---attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg--t-gga-a
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         5805  99 -     20310 ca--ag--------g-g-----aa----------------------------ccttc-----------------------------------a-aa-t--ctatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-tga-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg--t-gga-a
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           8789  99 +     29689 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ctatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-tga-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg--t-gga-a
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            3217  99 +      9989 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-tga-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg--t-gga-a
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          11466  99 -     27936 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-tga-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg--t-gga-a
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                             338  99 -     17152 ca--ag--------g-g-----aa----------------------------ccttc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-tga-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg--t-gga-a
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38813871  99 +  39242232 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--gag-tga-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg--t-gga-a
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21219567  99 -  21565898 ca--ag--------g-g-----aa----------------------------ccttc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-tga-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg--t-gga-a
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       36686  99 -     53127 ca--ag--------g-g-----aa----------------------------ccttc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-tga-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg--t-gga-a
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        3972  99 +      7159 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--gag-tga-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg--t-gga-a
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       11489  99 -     27947 ca--ag--------g-g-----aa----------------------------ccttc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-tga-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg--t-gga-a
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         11462  99 +     17596 ca--ag--------g-g-----aa----------------------------ccttc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtag-gta--gc--ct--ggg-tga-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg--t-gga-a
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                           687  99 +     26000 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-tga-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg--t-gga-a
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             18563  99 -     52598 tt--gc--------g-g-----ga---------------------------accccc-----------------------------------a-aa-t--atgtagac-c-ccaga-a-agaaat----gtgg-gta--gc--ct---tggc-a-cccc-attt-gtggctggcat-c-tgaagt----ggg--agca-gtct-tg--t-ggg-g
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           13913  99 +     57038 tt--gc--------g-g-----ga---------------------------accccc-----------------------------------a-aa-t--atgtagac-c-ccgga-a-agaaat----gtgg-gta--gc--ct--ggg-c-a-cccc-attt-gtggctggcat-c-tgaagt----ggg--agca-gtct-tg--t-ggg-g
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           7856 103 +     11226 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttgttgtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-c-a-accc-gttt-gtggctgccat-c-tgaagtggaggga--ggca-gtct-tg--t-gga-a
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18425427  99 -  18827391 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-tga-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg--t-gga-a
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       11868  99 -     50209 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-tga-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg--t-gga-a
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135418874  99 + 135778131 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-tga-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg--t-gga-A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1907390  94 +   2368649 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gcttca--gtg---a-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tG---------
i Colobus_angolensis.KN981557.1                          C 0 I 3
s Colobus_guereza.LG01                                   199947062  94 + 200372422 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--acttca--gtg---a-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg---------
i Colobus_guereza.LG01                                   C 0 I 3
s Colobus_polykomos.k141_906115                              33934  94 +     84244 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gcttca--gtg---a-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg---------
i Colobus_polykomos.k141_906115                          C 0 I 3
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          11867 104 -     20389 ca--ttcc---caca-g-----ta----------------------------ccct-----------------------------------ca-aa-t--ttgagatcag-t-ggc-gcaggaat----gtagag-c--ct--ct--gag-c-g-cccc-attt-gtggctgg-agtc-tgaagt----gaa--agca-gtga-tg--t-ggg-a
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 47538  45 +     63868 ----ta--------t-t-----ta----------------------------tccct-----------------------------------c-aa-a--atttattcag-ccagc-c-agagat----gtaa-ata--g---------------------------------------------------------------------------
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 90
s Cricetulus_griseus.LT883664.1                           11664876  45 + 224834208 ----ta--------t-g-----ta----------------------------tctct-----------------------------------c-aa-a--atttattcat-tgagt-c-agaaat----ataa-aca--g---------------------------------------------------------------------------
i Cricetulus_griseus.LT883664.1                          I 1 I 90
s Cryptoprocta_ferox.CryFer_flattened_line_16129             26355  99 -     87169 ca--tg--------g-g-----aa----------------------------ttcc-----------------------------------ca-aa-t--ttatagtcag-c-atg-gcagaaac----gtgggt-a--gt--ct--gaa-c-a-ccac-acgt-gtggctgg-catc-tgaagt----gta--gatg-gtc--tt--t-tggta
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    834638  88 +   1526836 ------------------------------------------------------cat-----------------------------------c-ta-a--ttgtagagaa-ccagg-c-aaaaat----atga-gtaaag----t--gta-c-a-tcct-atgt-acaattagcac-c--aaagc----aaa--ggct-gccc-ct--t-ggg-a
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 2 C 0
s Daubentonia_madagascariensis.ctg71                      12534740  99 -  12879189 tg--tg--------g-g-----ga----------------------------cctcc-----------------------------------a-aa-t--ttgtagtcac-ccagg-a-agaaat----gtgg-gta--gc--ct--g-gac-a-cccc-attt-gtggctgacat-c-tgatgt----ggg--agca-gtct-tg--t-ggg-a
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  671151  99 +   1390856 ca--ta--------g-g-----aa----------------------------cccc-----------------------------------aa-ag-t--ttgtagtcag-c-agg-gcagaaat----gtgcgt-a--gc--ct--gag-c-a-ctcc-attt-gtggctgg-tgtc-tgacgt----aga--ggca-gtc-tta--t-ggg-a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    3907  99 +    198055 ca--ta--------g-g-----aa----------------------------cccc-----------------------------------aa-ag-t--ttgtagtcag-c-agg-gcagaaat----gtgcgt-a--gc--ct--gag-c-a-ctcc-attt-gtggctgg-cgtc-tgacgt----aga--ggca-gtc-tta--t-ggg-a
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE759718.1                                   8412  99 +     11740 ca--tg--------a-g-----ag----------------------------ccct-----------------------------------ca-aa-t--ttttagtcag-c-agc-acagaaat----gtgggt-a--gc--ct--gag-c-a-tccc-attt-gcggctgg-agtt-tgaagt----aga--ggta-gcat-ta--t-gaa-a
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          17064  45 -    110024 ----ta--------t-a-----ta----------------------------cctct-----------------------------------c-aa-a--atgtattcat-ctatc-c-agaaat----gcaa-aca--g---------------------------------------------------------------------------
i Ellobius_lutescens.LOEQ01008920.1                      I 1 I 90
s Ellobius_talpinus.LOJH01109367.1                            3118  45 -      6299 ----ta--------t-a-----ta----------------------------cctct-----------------------------------c-aa-a--atgtattcat-ctatc-c-agaaat----gcaa-aca--g---------------------------------------------------------------------------
i Ellobius_talpinus.LOJH01109367.1                       I 1 I 90
s Enhydra_lutris.KZ291758.1                               16327197  95 -  41312741 ca--tg--------g-g-----aa----------------------------tccc-----------------------------------ca-ga-t--ttacagctag-c-agg-acagaaat----gtgggt-a--gc--ct--gag-t-a-cccc-attt-gtggc-----ttc-tgaagt----gga--gacc-gtc--tt--a-gagta
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1281205  99 +   4378816 ta--ta--------t-g-----aa----------------------------cccc-----------------------------------ca-aa-t--ttgtagttgg-c-agg-gcaggaat----gtgggt-a--gc--ct--gaa-c-a-ccac-attt-gtggttgg-cgtc-tgaagt----aga--ggca-gtc-ttg--t-ggg-a
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18529025  99 -  39960074 ta--ta--------t-g-----aa----------------------------cccc-----------------------------------ca-aa-t--ttgtagttgg-c-agg-gcaggaat----gtgggt-a--gc--cc--gaa-c-a-ccgc-attt-gtggttgg-cgtc-tgaagt----aga--ggca-gtc-ttg--t-ggg-a
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               31040  99 +    498745 ta--ta--------t-g-----aa----------------------------cccc-----------------------------------ca-aa-t--ttgtagttgg-c-agg-gcaggaat----gtgggt-a--gc--cc--gaa-c-a-ccgc-attt-gtggttgg-cgtc-tgaagt----aga--ggca-gtc-ttg--t-ggg-a
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21202069  99 -  21539334 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-tga-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg--t-gga-a
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              11246  98 -     14127 tt--tt--------g-g-----ga----------------------------ccccc-----------------------------------a-aa-t--tcataatc-c-ccagg-a-agaaat----gtgg-gta--gc--ct--ggg-c-a-tccc-attt-gtggctggcac-c-tgaagt----agg--agca-gtct-tg--t-ggg-g
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                3944  98 -     16928 tt--tt--------g-g-----ga----------------------------ccccc-----------------------------------a-aa-t--tcataatc-c-ccagg-a-agaaat----gtgg-gta--gc--ct--ggg-c-a-tccc-attt-gtggctggcac-c-tgaagt----agg--agca-gtct-tg--t-ggg-g
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              12977  98 -     25546 tt--tt--------g-g-----ga----------------------------ccccc-----------------------------------a-aa-t--tcataatc-c-ccagg-a-agaaat----gtgg-gta--gc--ct--ggg-c-a-cccc-attt-gtggctggcat-c-tgaagt----agg--agca-gtct-tg--t-ggg-g
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            10162  98 +     26330 tt--tt--------g-g-----ga----------------------------ccccc-----------------------------------a-aa-t--tcataatc-c-ccagg-a-agaaat----gtgg-gta--gc--ct--ggg-c-a-cccc-attt-gtggctggtat-c-tgaagt----agg--agca-gtct-tg--t-ggg-g
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 11410  98 +     23973 tt--tt--------g-g-----ga----------------------------ccccc-----------------------------------a-aa-t--tcataatc-c-ccagg-a-agaaat----gtgg-gta--gc--ct--ggg-c-a-tccc-attt-gtggctggcac-c-tgaagt----agg--agca-gtct-tg--t-ggg-g
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                10162  98 +     75513 tt--tt--------g-g-----ga----------------------------ccccc-----------------------------------a-aa-t--tcataatc-c-ccagg-a-agaaat----gtgg-gta--gc--ct--ggg-c-a-cccc-attt-gtggctggtat-c-tgaagt----agg--agca-gtct-tg--t-ggg-g
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  8113  98 +     97555 tt--tt--------g-g-----ga----------------------------ccccc-----------------------------------a-aa-t--tcataatc-c-ccagg-a-agaaat----gtgg-gta--gc--ct--ggg-c-a-tccc-attt-gtggctggcac-c-tgaagt----agg--agca-gtct-tg--t-ggg-g
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            11041  97 +     26496 tt--tt--------g-g-----ga----------------------------ccccc-----------------------------------a-aa-t--tcataatc-c-ccagg-a-agaaat----gtgg-gta--gc--ct--ggg-c-a-cccc-att--gtggctggcat-c-tgaagt----agg--agca-atct-tg--t-ggg-g
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  1646  98 -     17153 tt--tt--------g-g-----ga----------------------------ccccc-----------------------------------a-aa-t--tcataatc-c-ccagg-a-agaaat----gtgg-gta--gc--ct--ggg-c-a-tccc-attt-gtggctggcac-c-tgaagt----agg--agca-gtct-tg--t-ggg-g
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              11222  98 +    111500 tt--tt--------g-g-----ga----------------------------ccccc-----------------------------------a-aa-t--tcataatc-c-ccagg-a-agaaat----gtgg-gta--gc--ct--ggg-c-a-tccc-attt-gtggctggcac-c-tgaagt----agg--agca-gtct-tg--t-ggg-g
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20235051  96 + 206538554 ca--tg--------g-g-----aa----------------------------tccc-----------------------------------ca-gt-t--ttatagtcag-----g-gcagaaat----gtgggt-a--gt--ct--gag-c-agcccc-cgt--ggggctgg-catc-tgaagt----gaa--gaca-gtc--tt--t-tgata
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20193895  96 + 205367284 ca--tg--------g-g-----aa----------------------------tccc-----------------------------------ca-gt-t--ttatagtcag-----g-gcagaaat----gtgggt-a--gt--ct--gag-c-agcccc-cgt--ggggctgg-catc-tgaagt----gaa--gaca-gtc--tt--t-tgata
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  7407  96 -     36744 ca--tg--------g-g-----aa----------------------------tccc-----------------------------------ca-gt-t--ttatagtcgg-----g-gcagaaat----gtgggt-a--gt--ct--gag-c-agcccccat---ggggctgg-catc-tgaagt----gaa--gaca-gtc--tt--t-tgata
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     423495  88 -    453645 TA--TG--------A-G-----GA----------------------------CCTCC-----------------------------------A-AC-T--TAGTAACCAG-CCGCA-A-AAAAAA----GTGG-ATT--GC---C--TGA-G-C-ACTC-CACT-TTGCCTAGCAC-T-TGATGT----G------CT-GGCC-T----------
i Galago_moholi.ctg2040                                  I 3 I 3
s Galago_senegalensis.k141_631886                             1202  88 +     11339 TA--TG--------A-G-----GA----------------------------CCTCC-----------------------------------A-AC-T--TAGTAACCAG-CCGCA-A-AAAAAA----GTGG-ATC--GC---C--TGA-G-C-ACTC-CACT-TTGCCTGGCAC-T-TGATGT----G------CT-GGCC-T----------
i Galago_senegalensis.k141_631886                        I 3 I 3
s Galagoides_demidoff.k141_1959596                            5002  99 +      6795 ta--tg--------a-g-----ga----------------------------cctcc-----------------------------------a-ac-t--tagtaaccag-ccaca-aaaaaaaa----gtgg-atc--ac--ct--gag-c-a-ctcc-actt--tgcctggcac-t-tgatgt----ggg--cgca-atct-tg--t-ggg-a
i Galagoides_demidoff.k141_1959596                       I 3 C 0
s Galeopterus_variegatus.GalVar_scaffold_266699               1705  99 +      2098 gg--tg--------a-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttgtagtcag-ccaca-c-agaaat----gtgg-gta--gc--ct--ggg-c-a-cc-tgatct-gtggctgccat-c-tgaagt----aag--ggca-gtct-ta--t-agg-a
i Galeopterus_variegatus.GalVar_scaffold_266699          C 0 C 0
s Gorilla_beringei.k141_3596273                              12801 127 -     32273 ca--ag--------g-g-----aa----------------------------cctccagatttaggggatgtcaagggagcctcc-------a-ga-t--ttgtaatcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-cga-ccc--attt-gtggctggcat-c-tgaaat----gga--gaca-gtct-tg--t-gga-a
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.CYUI03001814.1                             29312 127 -     31004 ca--ag--------g-g-----aa----------------------------cctccagatttaggagatgtcaagggagcctcc-------a-ga-t--ttgtagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-c-a-accc-attt-gtggctggcat-c-tgaaat----gga--gaca-gtct-tg--t-gga-a
i Gorilla_gorilla.CYUI03001814.1                         I 105 I 17
s Graphiurus_murinus.GraMur_scaffold_10447                   31993  90 +     78134 ----------------------aa----------------------------cc--c-----------------------------------a-aa-t--ttgtaatcag-ccag--c-agaaat----atgg-gta--g-c-ct--gtg-t-g-tcct-attt-gcagctggtat-a-tgaagt------aaaggca-gtct-ta--t-ggg-a
i Graphiurus_murinus.GraMur_scaffold_10447               I 4 C 0
s Hapalemur_alaotrensis.k141_170648                           4303  98 -     19426 tt--gt--------a-g-----ga----------------------------cccct-----------------------------------a-aa-t--tcaaaatc-c-ccagg-a-agaaat----gtgg-gta--tc--ct--ggg-c-a-cccc-attt-gtggctgacat-c-tgaagt----agg--agca-gtct-tg--t-ggg-g
i Hapalemur_alaotrensis.k141_170648                      C 0 I 52
s Hapalemur_gilberti.k141_488810                              9447  98 -     15286 tt--gt--------a-g-----ga----------------------------cccct-----------------------------------a-aa-t--tcaaaatc-c-ccagg-a-agaaat----gtgg-gta--gc--ct--ggg-c-a-cccc-attt-gtggctgacat-c-tgaagt----agg--acca-gtct-tg--t-ggg-g
i Hapalemur_gilberti.k141_488810                         C 0 I 42
s Hapalemur_griseus.k141_1511508                             11085  98 +     18253 tt--gt--------a-g-----ga----------------------------cccct-----------------------------------a-aa-t--tcaaaatc-c-ccagg-a-agaaat----gtgg-gta--gc--ct--ggg-c-a-cccc-attt-gtggctgacat-c-tgaagt----agg--acca-gtct-tg--t-ggg-g
i Hapalemur_griseus.k141_1511508                         C 0 I 42
s Hapalemur_meridionalis.k141_248335                         11188  98 -     41752 tt--gt--------a-g-----ga----------------------------cccct-----------------------------------a-aa-t--tcaaaatc-c-ccagg-a-agaaat----gtgg-gta--gc--ct--ggg-c-a-cccc-attt-gtggctgacat-c-tgaagt----agg--agca-gtct-tg--t-ggg-g
i Hapalemur_meridionalis.k141_248335                     C 0 I 42
s Hapalemur_occidentalis.k141_907772                         11025  98 -     16460 tt--gt--------a-g-----ga----------------------------cccct-----------------------------------a-aa-t--tcaaaatc-c-ccagg-a-agaaat----gtgg-gta--gc--ct--ggg-c-a-cccc-attt-gtggctgacat-c-tgaagt----agg--agca-gtct-tg--t-ggg-g
i Hapalemur_occidentalis.k141_907772                     C 0 I 53
s Helogale_parvula.HelPar_flattened_line_2585               240188 102 +    327341 ca--tg--------g-ctataaat----------------------------tcct-----------------------------------ca-aa-t--ttatagtcag-a-agg-gcagcagt----gtgggt-a--gt--ct--caa-c-a-ctgt-ggt--atggctgg-catc-cgaagt----gga--ggtg-gtc--t---t-tggta
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       109689  99 +   1711038 ca--tg--------g-g-----aa----------------------------ccct-----------------------------------ca-aa-c--ttgaggtcag-c-agt-gcagaaat----gtgaat-a--gc--ct--gag-c-a-ctcc-atgt-gtggctgg-agtc-tgaagt----gag--ggca-gtct-tg--t-gga-a
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               41111  99 +     43066 ca--tg--------g-g-----aa----------------------------ccct-----------------------------------ca-aa-a--ttgaggtcag-c-agt-acagaaat----gtggat-a--gc--ct--gag-c-a-cccc-atgt-gtggctgg-aggc-tgaagt----ggg--gtca-gtct-tg--t-gga-a
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    431644  99 +    630532 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-ga-t--ctgtagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-cga-ccc--atct-gtggctggcat-c-tgaaat----gga--gaca-gtct-tg--t-gga-a
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  42332  99 +     55795 ca--tt--------g-g-----aa----------------------------tccc-----------------------------------ca-aa-t--ttatagtcat-c-agg-gcagaaat----gtgggt-g--gt--ct--gaa-c-a-cccc-acgc-atggctag-catc-tgaagt----gaa--gatg-gtc--tt--t-tggta
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_307679                               14578  99 -     15490 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-ga-t--ctgtagtcag-ccagg-g-aaaaat----gtgg-gta--gc--ct--ggg-cga-ccc--atct-gtggctggcat-c-tgaaat----gga--gaca-gtct-tg--t-gga-a
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              56584  99 +     67168 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-ga-t--ctgtagtcag-ccagg-g-aaaaat----gtgg-gta--gc--ct--ggg-cga-ccc--atct-gtggctggcat-c-tgaaat----gga--gaca-gtct-tg--t-gga-a
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189540234  99 - 191637585 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-ga-t--ctgtagtcag-ccagg-g-aaaaac----gtgg-gta--gc--ct--ggg-cga-ccc--atct-gtggctggcat-c-tgaaat----gga--gaca-gtct-tg--t-gga-a
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3333128  99 -  11177569 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-ga-t--ctgtagtcag-ccagg-g-aaaaac----gtgg-gta--gc--ct--ggg-cga-ccc--atct-gtggctggcat-c-tgaaat----gga--gaca-gtct-tg--t-gga-a
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7517168  98 -   7955117 ca--ta--------gga-----aa----------------------------gcctc-----------------------------------a-ca-t--gtgtactcag-ccag-ac-agaacc----ctgg-gta--g-c-cc--atg-c-a-tcct-gt---gtggccggcat-c-tgaagt----gga--ggca-atct-tg--t-ggg-a
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   19992  99 +     31101 tt--gc--------a-g-----ga---------------------------actccc-----------------------------------a-aa-t--ttgtagtc-c-ccagg-a-agaaat----gtgg-gta--gc--ct--ggg-c-a-cccc-attt-gtggctggcat-c-tgaagt----ggg--agca-gttt-tg--t-ggg-g
i Indri_indri.k141_3655594                               C 0 I 1
s Jaculus_jaculus.JH725527.1                               8276085 100 -   9596543 CATATA--------G-G-----AA----------------------------CCCCT-----------------------------------A-AA-A--TTCTATTCAA-CTAGG-C-AGAAAT----ATAG-GTA--G-A-CT--ATG-C-A-CCCT-ATTT-GTGATTGACCT-C-TTTAGT------A-CAGCA-ATCC-TT--T-TGG-A
i Jaculus_jaculus.JH725527.1                             I 2322 C 0
s Lemur_catta.scaffold_24                                 15521550  98 -  30322482 tt--gt--------a-g-----ga----------------------------ctcct-----------------------------------a-aa-t--tcaaaatc-c-ccagg-a-agaaat----gcgg-gta--gc--ct--ggg-c-a-cccc-attt-gtggctgacat-c-tgaagt----agg--agca-gtct-tg--t-ggg-g
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        4626  34 +     64341 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttgttgtcaa-ccagg-c-a-----------------------------------------------------------------------------------------------
i Leontocebus_fuscicollis.k141_1820339                   C 0 I 19
s Leontocebus_illigeri.k141_3350179                           1686  34 +      4941 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttgttgtcag-ccagg-c-a-----------------------------------------------------------------------------------------------
i Leontocebus_illigeri.k141_3350179                      C 0 I 19
s Leontocebus_nigricollis.k141_4610752                        4554  34 +     35603 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttgttgtcag-ccagg-c-a-----------------------------------------------------------------------------------------------
i Leontocebus_nigricollis.k141_4610752                   C 0 I 19
s Leontopithecus_chrysomelas.k141_1519602                    25982 102 +     38576 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttgttgtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--g-gac-a-accc-gttt-gtg-ctgccat-c-tgaagtggaggga--ggca-gtct-tg--t-gga-a
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         22679 102 +     66356 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttgttgtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--g-gac-a-accc-gttt-gtg-ctgccat-c-tgaagtggaggga--ggca-gtct-tg--t-gga-a
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          8469  59 -     23766 ----------------------------------------------------------------------------------------------------------------------------------tgg-gta--gt--ct--ggg-c-a-cccc-attt-gtggctggcat-c-tgaagt----ggg--agca-gtct-tg--t-ggg-g
i Lepilemur_ankaranensis.k141_596936                     I 31 C 0
s Lepilemur_dorsalis.k141_577674                             26416  59 +     45836 ----------------------------------------------------------------------------------------------------------------------------------tgg-gta--gt--ct--ggg-c-a-cccc-attt-gtggctggcat-c-tgaagt----ggg--agca-gtct-tg--t-ggg-g
i Lepilemur_dorsalis.k141_577674                         I 31 C 0
s Lepilemur_ruficaudatus.k141_320948                           604  94 -      1719 --------------g-a-----ga---------------------------actccc-----------------------------------a-aa-t--ttgtagtc-c-ccggg-a-agaaat----gtgg-gta--gt--ct--ggg-c-a-cccc-attt-gtggctggcat-c-tgaagt----gg---agca-gtct-tg--t-ggg-g
i Lepilemur_ruficaudatus.k141_320948                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      24471  59 +     54090 ----------------------------------------------------------------------------------------------------------------------------------tgg-gta--gt--ct--ggg-c-a-cccc-attt-gtggctggcat-c-tgaagt----ggg--agca-gtct-tg--t-ggg-g
i Lepilemur_septentrionalis.k141_185316                  I 31 C 0
s Leptonychotes_weddellii.KB714746.1                       3040331  99 +   3914936 ca--cg--------g-g-----aa----------------------------tccc-----------------------------------ca-aa-t--ttatagccaa-c-acg-gcagaaat----gtgggt-a--tt--ct--gag-t-a-cccc-attt-gtggctgg-caac-tgaagt----gga--gaca-gtc--tt--a-cgata
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                              1433999  98 +   1826925 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-ga-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-tga-cc---attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg--t-gga-a
i Lophocebus_aterrimus.ctg367                            I 4 C 0
s Loris_lydekkerianus.k141_2539221                            2900  99 +     11245 ta--tg--------g-a-----gg----------------------------cctcc-----------------------------------a-ac-t--tagtaaccaa-ccgtg-a-aaaaaa----gtgg-ata--ac--ct--gag-c-t-ttcc-actt-gtgcctggcac-c-tgatgt----ggg--cgca-gtct-tg--t-ggg-a
i Loris_lydekkerianus.k141_2539221                       I 3 I 34
s Loris_tardigradus.ctg83                                  1001738  99 +   6120653 ta--tg--------g-a-----gg----------------------------tctcc-----------------------------------a-ac-t--tagtaaccaa-ccatg-a-aaaaaa----gtgg-ata--ac--ct--gag-c-t-ttcc-actt-gtgcctggcac-c-tgatgt----ggg--cgca-gtct-tg--t-ggg-a
i Loris_tardigradus.ctg83                                I 3 I 34
s Lycaon_pictus.CM007581.1                                17953128  99 -  59628241 ca--tg--------g-g-----aa----------------------------tccc-----------------------------------ca-aa-c--ttatagccag-c-agg-gcaaaaat----gtgggt-a--gc--ct--gag-t-a-cc-tcattt-gtggctgg-catc-tgaagt----gga--gaca-gtc--tt--a-tggta
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               3820  98 +     40492 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-ga-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-tga-cc---atct-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg--t-gga-a
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59673074  98 +  60120075 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagttag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-tga-cc---attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg--t-gga-a
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  9576  98 -     26193 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-tga-cc---atct-gtggctgggat-c-tgaagc----gga--ggca-gtgt-tg--t-gga-a
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            77372  98 -    114318 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-tga-cc---attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg--t-gga-a
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  3087  98 -     23192 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-tga-cc---atct-gtggctgggat-c-tgaagc----gga--ggca-gtgt-tg--t-gga-a
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                12539  98 -     29190 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-tga-cc---atct-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg--t-gga-a
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  21107  98 +     37952 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-tga-cc---atct-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg--t-gga-a
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186836195  98 + 187317192 CA--Ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--g-g-g-T-GACC-ATCT-GTGGCTGGGAT-C-TGAAGC----GGA--GGCA-GTGT-TG--T-GGA-A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25454758  98 -  25927173 CA--AG--------G-G-----AA----------------------------CCTCC-----------------------------------A-AA-T--TTATAGTCAG-CCAGG-C-AAAAAT----GTGG-GTA--GC---C--TGG-G-T-GACC-ATCT-GTGGCTGGGAT-C-TGAAGT----GGA--GGCA-GTGT-TG--T-GGA-A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  76956  98 +     89720 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-tga-cc---atct-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg--t-gga-a
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 3953  98 +     20474 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-tga-cc---attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg--t-gga-a
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   3755  98 -     14993 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-tga-cc---atct-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg--t-gga-a
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  326625  98 -    668171 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-tga-cc---atct-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg--t-gga-a
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 2057  98 -     24072 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-tga-cc---attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg--t-gga-a
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               22694  98 -     45290 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-tga-cc---atct-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg--t-gga-a
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88488  99 +     94391 ca--tg--------a-g-----ag----------------------------tcct-----------------------------------ca-aa-t--ttttagttag-c-agc-acagaagt----gtgggt-a--gc--ct--gaa-c-a-tccc-attt-gtggctgg-agtt-tgaagt----aga--ggta-gtgt-ta--t-ggg-a
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23934273  98 -  24302211 cc--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-ga-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-tga-cc---attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-ta--t-gga-a
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               348406  98 +    752769 cc--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-ga-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-tga-cc---attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-ta--t-gga-a
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              17346  85 +    737560 ct--tg--------g-g-----aa----------------------------ccca-----------------------------------ca-aa-c--ttatagtcag-c-agg-gtcaaaat----gtgtgc-a--gc--ct--gag---agcccc-attt-gtagctga-tgtc-tgaagt----gac--g--------------------
i Manis_javanica.JSZB01003497.1                          C 0 I 35
s Manis_pentadactyla.KN006162.1                              48731  85 -    317179 ct--tg--------g-g-----aa----------------------------ccca-----------------------------------ca-aa-c--ttgtagtcag-c-agg-gtcaaaat----gtgtgc-a--gc--ct--gag---agcccc-attt-gtggctga-cgtc-tgaagt----gac--g--------------------
i Manis_pentadactyla.KN006162.1                          C 0 I 35
s Marmota_marmota.CZRN01000018.1                          33099480  98 -  40650429 ca--ta--------gga-----aa----------------------------ccctc-----------------------------------a-ca-t--gtgtactcag-ccag-ac-agaacc----atgg-gta--g-c-cc--atg-c-a-tcct-gt---gtggccggcat-c-tgaagt----gga--ggca-atct-tg--t-ggg-a
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         8213 107 -    207569 ca--aaccttgtacg-a-----ca----------------------------tcct-----------------------------------ca-aa-t--ttgaggtcag-c-agt-gcagaaat----gtagat-a--gc--cg--gag-c-a-cccc-attt-gtggctgg-agtc-agaagt----gga--ggca-atgg-tg--t-ggg-a
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              7905  99 +     13704 ca--tg--------g-g-----aa----------------------------tccc-----------------------------------ca-aa-t--ttatagctag-c-agg-acagaaat----gtgggt-a--gc--ct--gag-c-a-cccc-attt-gtggctgg-tgtc-tgaaat----gga--gaca-gtc--tt--a-gagta
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 29443  52 +    140813 ----ta--t--ca-c-t-----ca----------------------------cctct-----------------------------------c-aa-a--atttatccag-acagt-c-agataaataaataa-ata--g---------------------------------------------------------------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             I 1 I 104
s Mesocricetus_auratus.KB708134.1                         12179949  45 -  29670104 ----ta--------t-g-----ta----------------------------cctct-----------------------------------c-aa-a--atttattcat-ccagt-c-ataaat----gtaa-gca--g---------------------------------------------------------------------------
i Mesocricetus_auratus.KB708134.1                        I 1 I 90
s Mico_argentatus.k141_1239457                                2767 102 -      7380 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttgttgtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-c-a-acct-gttt-gtg-ctgccat-c-tgaggtggaggga--ggca-gtct-tg--t-gga-a
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               1837 102 +     18990 ca--ag--------g-g-----aa----------------------------actcc-----------------------------------a-aa-t--ttgttgtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-c-a-acct-gttt-gtg-ctgccat-c-tgaggtggaggga--ggca-gtct-tg--t-gga-a
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      2772 102 -      7356 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttgttgtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-c-a-acct-gttt-gtg-ctgccat-c-tgaggtggaggga--ggca-gtct-tg--t-gga-a
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18288936  99 -  93316391 TT--GC--------G-G-----GA-----A----------------------ACCCC-----------------------------------A-AA-T--TTGTAGAC-C-CCagg-a-agaaat----gtgg-gta--gc--ct--ggg-c-a-cccc-attt-gtggctggcat-c-ggaagt----ggg--agca-gtct-tg--t-ggg-g
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11257573  46 -  27267610 ----TA--------T-G-----TA----------------------------CCTCT-----------------------------------C-AAAA--ATGTATTCAT-CCATC-c-agaaat----gcaa-aca--g---------------------------------------------------------------------------
i Microtus_ochrogaster.CM001695.1                        I 1 I 90
s Miopithecus_ogouensis.k141_534055                           5995  99 -     28506 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ctatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-tga-ccc--atct-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg--t-gga-a
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         3168  99 -      8324 ca--cg--------g-g-----aa----------------------------tccc-----------------------------------ca-aa-t--ttatagccag-c-aca-gcagaaat----gtgggt-a--tt--ct--gag-t-a-cccc-attt-gtggctgg-cctc-tgaagt----gga--gaca-gtc--tt--a-cgata
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      6505  99 -     37649 tt--gc--------a-g-----ga---------------------------aacccc-----------------------------------a-aa-t--ttgtagac-c-ccagg-a-agaaat----gtgg-gta--gc--tt--gag-c-a-cccc-attt-gtggctggcat-c-tgaagt----ggg--agca-gtct-tg--t-ggg-g
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 139191  98 -    366855 ca--gg--------g-g-----ca----------------------------ctct-----------------------------------ca-tg-t--ttgtagtcag-t-gac-acagaaat----gtgggg-a--gt--ct--gag-c-a-cccc-agtt-gtggctgg-agtc-tgaagt----ggg--ggca-gcc--ta--t-agg-a
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   33291 104 +     37127 ca--tg--------g-ctataaat----------------------------tccc-----------------------------------ca-aa-t--ttatagtcag-c-agg-gcagcaac----atgggt-a--gt--ct--caa-c-a-ctgt-gtgt-gtggctgg-catc-ggaact----gga--ggtg-atc--tt--t-tggta
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Mus_caroli.LT608237.1                                   84358545  45 - 120012414 ----tg--------t-g-----ta----------------------------tctct-----------------------------------c-aa-a--atgtattcag-ccctt-t-ggaaat----gtaa-ata--g---------------------------------------------------------------------------
i Mus_caroli.LT608237.1                                  I 1 I 94
s Mus_musculus.chr8                                       87647534  45 - 129401213 ----tg--------t-g-----ta----------------------------tctct-----------------------------------c-aa-a--atgtattcag-ccctt-t-ggaaat----gtaa-ata--g---------------------------------------------------------------------------
i Mus_musculus.chr8                                      I 1 I 94
s Mus_pahari.LT608297.1                                   31351818  46 -  89631738 ----tg--------t-g-----ta---------------------------atctct-----------------------------------c-aa-a--atgtattcag-tcctt-t-gaaaat----gtaa-ata--g---------------------------------------------------------------------------
i Mus_pahari.LT608297.1                                  I 1 I 95
s Mus_spretus.CM004101.1                                  90749612  45 - 130317789 ----tg--------t-g-----ta----------------------------tcttt-----------------------------------c-aa-a--atgtattcag-ccctt-t-ggaaat----gtaa-ata--g---------------------------------------------------------------------------
i Mus_spretus.CM004101.1                                 I 1 I 94
s Muscardinus_avellanarius.MusAve_scaffold_82313              4269  95 +     14296 cc--ta--------g-a-----aa----------------------------ccctc-----------------------------------a-aa-t--ttgtagtcag-ccag--c-agaaat----gtgg-gta--a-t-gt--gtg---t-cc-t-attt-gcagaagacat-cttgaagt------a--gaca-gtct-ca--c-ggg-a
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               299086  99 -  14710649 ca--tg--------g-g-----aa----------------------------tccc-----------------------------------ca-aa-t--ttatagctag-c-agg-acagaaat----gtaggt-a--gc--ct--gag-c-a-cccc-attt-gtggccgg-tttc-tgaagt----gga--gaca-gtc--tt--a-gagta
i Mustela_putorius.JH418006.1                            C 0 C 0
s Nasalis_larvatus.k141_413338                               11992  94 +     21681 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ctcagtg---a-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg---------
i Nasalis_larvatus.k141_413338                           C 0 I 3
s Noctilio_leporinus.NocLep_scaffold_251                    757781  97 +    783361 ca--tg--------a-g-----aa----------------------------ccct-----------------------------------ca-tg-t--ttgaggtcag-t-gcc-acagaaat----g---gg-g--gc--ct--gaa-t-a-cccc-attt-gtagctgg-agcc-tgtcat----gga--agca-gtc--tacac-agg-a
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9147388  99 -   9404916 ca--tg--------g-g-----aa----------------------------tccc-----------------------------------ca-aa-t--ttctagccag-c-agg-gcaaaaat----gtgggt-c--gc--ct--gag-t-a-cc-tcattt-gtggctgg-catc-tgaagt----gga--gaca-gtc--tt--a-tggta
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102576712  99 - 196305487 ta--tg--------g-a-----gg----------------------------cctcc-----------------------------------a-ac-t--tagtaaccaa-ccatg-a-aaaaaa----gtgg-ata--gc--ct--gag-c-t-ttcc-actt-gtgcctggcac-c-tgattt----ggg--cgca-gtct-tg--t-ggg-a
i Nycticebus_bengalensis.LG01                            I 3 C 0
s Nycticebus_coucang.k141_5327727                             4398  99 +      8486 ta--tg--------g-a-----gg----------------------------cctcc-----------------------------------a-ac-t--tagtaaccaa-ccatg-a-aaaaaa----gtgg-ata--gc--ct--gag-c-t-ttcc-actt-gtgcctggcac-c-tgattt----ggg--cgca-gtct-tg--t-ggg-a
i Nycticebus_coucang.k141_5327727                        I 3 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105747140  98 + 199412804 ta--tg--------g-a-----gg----------------------------cctcc-----------------------------------a-ac-t--tagtaaccaa-ccatg-a-aaaa-a----gtgg-ata--gc--ct--gag-t-t-ttcc-actt-gtgcctggcac-c-tgattt----ggg--caca-gtct-tg--t-ggg-a
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 3 C 0
s Ochotona_princeps.JH802162.1                             1360559  34 +   3988456 TG--TG--------G-G-----AA----------------------------CCCT-----------------------------AGTCGCAA-AA-T--CTGTAAGCAC-T-------------------------------------------------------------------------------------------------------
i Ochotona_princeps.JH802162.1                           C 0 I 56
s Odobenus_rosmarus.KB229312.1                              504474  48 -   2017862 ca--tg--------g-g-----aa----------------------------tccc-----------------------------------ca-aa-t--ttatagccag-c-aca-gcagaaat----gtgggt-a--tc--------------------------------------------------------------------------
i Odobenus_rosmarus.KB229312.1                           C 0 I 51
s Ondatra_zibethicus.OndZib_scaffold_46174                   21690  45 +     28053 ----TA--------T-G-----TA----------------------------CCCCT-----------------------------------C-AA-A--ATGTATTTAT-CCATC-C-AGAAAT----GCAA-ACA--G---------------------------------------------------------------------------
i Ondatra_zibethicus.OndZib_scaffold_46174               I 1 I 90
s Onychomys_torridus.OnyTor_scaffold_2986                    76767  44 +    102263 ----ta--------g-g-----ta-----------------------------cact-----------------------------------t-aa-a--atttgttcat-ccagt-c-agaaat----gtaa-aca--g---------------------------------------------------------------------------
i Onychomys_torridus.OnyTor_scaffold_2986                I 1 I 90
s Otocyon_megalotis.JAEUCK010005147.1                       460143  99 -    559221 ca--tg--------g-g-----aa----------------------------tccc-----------------------------------ca-aa-t--ttatagccag-c-agg-gcaaaaat----gtgggt-a--gc--ct--gag-t-a-cc-tcattt-gtggctgg-catc-tgaagt----aga--gaca-gtc--tt--a-tgata
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         1030  98 +      8798 ta--tg--------a-g-----ga----------------------------cctcc-----------------------------------a-ac-t--tagaaaccag-ccgca-a-aaaaaa----gtgg-atc--gc--ct--gag-c-a-ctcc-actt--tgcctggcac-t-tgatgt----ggg--caca-gtct-ta--t-ggg-a
i Otolemur_crassicaudatus.k141_222918                    I 3 C 0
s Otolemur_garnettii.GL873799.1                             693197  98 -   1103335 TA--TG--------A-G-----GA----------------------------CCTCC-----------------------------------A-AC-T--TAGAAACCAG-CCGCA-A-AAAAaa----gtgg-atc--gc--ct--gag-c-a-c-TC-CACT-TTGCCTGGCAC-T-TGATGT----GGG--CACA-GTCT-TA--T-GGG-A
i Otolemur_garnettii.GL873799.1                          I 3 C 0
s Pan_paniscus.KQ411613.1                                    40919 108 +     80009 CA--AG--------G-G-----AA----------------------------CCTCCAGATTTAGGAGATGTCAAGGGAGCCTCC-------A-GA-T--TTGTAGTCAG-CCAGG-C-AAAAAT----GTGG-GTA--GC----------------------------CTGGCAT-C-TGAAAT----GGA--GACA-GTCT-TG--T-GGA-A
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189139811 127 + 189151597 CA--AG--------G-G-----AA----------------------------CCTCCAGATTTAGGAGATGTCAAgggagcctcc-------a-ga-t--ttgtaatcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-cga-ccc--attt-gtggctggcat-c-tgaaat----gga--gaca-gtCT-TG--T-GGA-A
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  149059  96 +    230217 ca--tg--------g-g-----aa----------------------------tccc-----------------------------------ca-gt-t--ttatagtcag-----g-gcagaaat----gtgggt-a--gt--ct--gag-c-agcccccat---ggggctgg-catc-tgaagt----gaa--gaca-gtc--tt--t-tgata
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                262266  96 +  18783137 ca--tg--------g-g-----aa----------------------------tccc-----------------------------------ca-gt-t--ttatagtcag-----g-gcagaaat----gtgggt-a--gt--ct--gag-c-agcccccat---ggggctgg-catc-tgaagt----gaa--gaca-gtc--tt--t-tgata
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4718902  96 -   8748460 ca--tg--------g-g-----aa----------------------------tccc-----------------------------------ca-gt-t--ttatagacag-----g-gcagaaat----gtgggt-a--gt--ct--gag-c-agcccccat---ggggctgg-catc-tgaagt----gaa--gaca-gtc--tt--t-tgata
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183440028  98 + 183742232 CA--AG--------G-G-----AA----------------------------CCTCC-----------------------------------A-GA-T--TTATAGTCAG-CCAGG-C-AAAAAT----GTGG-GTA--GC---C--TGG-G-T-GACC-ATTT-GTGGCTGGGAT-C-TGAAGT----GGA--GGCA-GTGT-TG--T-GGA-A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             3721  98 +     20448 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-ga-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-tga-cc---attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg--t-gga-a
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20560526  98 +  20919399 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-ga-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-tga-cc---attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg--t-gga-a
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   2464  98 +     41871 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-ga-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-tga-cc---attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg--t-gga-a
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     5750  98 +     27711 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-ga-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-tga-cc---attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg--t-gga-a
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  5829  98 +      9205 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-ga-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-tga-cc---attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg--t-gga-a
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10521 100 -     78924 ca--tg--------g-g-----aa----------------------------ttcc-----------------------------------ca-aa-t--ttatagtcag-t-agg-acagaaat----gtgggt-a--gt--cc--gag-c-a-ctgc-atgt-gtggctgg-catc-tgaagt----gga--gacaggtt--tt--t-tggta
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            6907  98 +     13100 ta--tg--------g-g-----ga----------------------------cctcc-----------------------------------a-ac-t--tagtaaccag-ccatg-a-aaaa-a----gtgg-ata--ac--ct--gag-c-a-ctcc-actt-gtacctggcac-c-tgatgt----cgg--aaca-gtct-tg--t-ggg-a
i Perodicticus_ibeanus.k141_855320                       I 3 C 0
s Perodicticus_potto.k141_1092580                             5280  98 +     25941 ta--tg--------g-g-----ga----------------------------cctcc-----------------------------------a-ac-t--tagtaaccag-ccatg-a-aaaa-a----gtgg-ata--ac--ct--gag-c-a-ctcc-actt-gtacctggcac-c-tgatgt----ggg--aaca-gtct-tg--t-ggg-a
i Perodicticus_potto.k141_1092580                        I 3 C 0
s Peromyscus_maniculatus.KI615324.1                       18191365  45 -  18517816 ----tt--------g-g-----ta----------------------------cctct-----------------------------------t-aa-a--atttattcat-ccagt-c-agaaat----gtaa-ata--g---------------------------------------------------------------------------
i Peromyscus_maniculatus.KI615324.1                      I 1 I 90
s Piliocolobus_badius.k141_1234363                           40506  94 +     62158 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gcttca--gtg---a-ccc--actt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg---------
i Piliocolobus_badius.k141_1234363                       C 0 I 3
s Piliocolobus_gordonorum.k141_381342                        35228  94 +     89929 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gcttca--gtg---a-ccc--actt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg---------
i Piliocolobus_gordonorum.k141_381342                    C 0 I 3
s Piliocolobus_kirkii.k141_448987                            36644  94 +     51399 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gcttca--gtg---a-ccc--actt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg---------
i Piliocolobus_kirkii.k141_448987                        C 0 I 3
s Piliocolobus_tephrosceles.PDMG02000141.1                14292882  94 -  14605196 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gcttca--gtg---a-ccc--actt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tG---------
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 3
s Pongo_abelii.CM009266.2                                189127953  99 + 189387572 Ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-ga-t--ttgtagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-cga-ccc--attt-gtggctggcat-c-tcaaat----gga--gaca-gtcT-TG--T-GGA-A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9567561  99 +   9816681 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-ga-t--ttgtagtcag-tcagg-c-aaaaat----gtgg-gta--gc--ct--ggg-cga-ccc--attt-gtggctggcat-c-tcaaat----gga--gaca-gtct-tg--t-gga-a
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               70156  94 -     81375 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ctcagtg---a-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg---------
i Presbytis_comata.k141_677006                           C 0 I 3
s Presbytis_mitrata.k141_1087752                              1976  94 +     19060 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ctcagtg---a-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg---------
i Presbytis_mitrata.k141_1087752                         C 0 I 3
s Prolemur_simus.MPIZ01000396.1                            2594201  98 -   4620579 TT--GT--------A-G-----GA----------------------------CCCCT-----------------------------------A-AA-T--TCAAAATC-C-ccagg-a-agaaat----gtgg-gta--gc--cc--ggg-c-a-cccc-attt-gtggctgacat-c-tgaagt----agA--AGCA-GTCT-TG--T-GGG-G
i Prolemur_simus.MPIZ01000396.1                          C 0 I 42
s Propithecus_coquerelli.NW_012148875.1                     988190  98 +   2598838 TT--GT--------G-G-----GA----------------------------ACCCC-----------------------------------C-AA-A--TTTTAGTC-C-CCAGG-A-AGAAAT----GTGG-GTA--GC--CT--GGG-C-A-CCCC-ATTT-gtggctggcat-c-tgaagt----ggg--agCA-TTTT-TG--T-GGG-G
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 1
s Propithecus_coronatus.k141_347390                          26501  97 +     38485 tt--gt--------g-g-----ga----------------------------acccc-----------------------------------c-aa-a--ttttagtc-c-ccagg-a-agaaat----gtgg-gta--gc--ct--ggg-c-a-cccc-attt-gtg-ctggcat-c-tgaagt----ggg--agca-tttt-tg--t-ggg-g
i Propithecus_coronatus.k141_347390                      C 0 I 1
s Propithecus_diadema.k141_357118                             2661  98 +      4256 tt--gt--------g-g-----ga----------------------------acccc-----------------------------------c-aa-a--ttttagtc-c-ccagg-a-agaaat----gtgg-gta--gc--ct--ggg-c-a-cccc-attt-gtggctggcat-c-tgaagt----ggg--agca-tttt-cg--t-ggg-g
i Propithecus_diadema.k141_357118                        C 0 I 1
s Propithecus_edwardsi.k141_1176054                          24021  98 +     35766 tt--gt--------g-g-----ga----------------------------acccc-----------------------------------c-aa-a--ttttagtc-c-ccagg-a-agaaat----gtgg-gta--gc--ct--ggg-c-a-cccc-attt-gtggctggcat-c-tgaagt----ggg--agca-tttt-tg--t-ggg-g
i Propithecus_edwardsi.k141_1176054                      C 0 I 1
s Propithecus_perrieri.k141_1200571                           2203  98 -     24134 tt--gt--------g-g-----ga----------------------------acccc-----------------------------------c-aa-a--ttttagtc-c-ccagg-a-agaaat----gtgg-gta--gc--ct--ggg-c-a-cccc-attt-gtggctggcat-c-tgaagt----ggg--agca-tttt-tg--t-ggg-g
i Propithecus_perrieri.k141_1200571                      C 0 I 1
s Propithecus_tattersalli.k141_790011                        26016  98 -     67325 tt--gt--------g-g-----ga----------------------------acccc-----------------------------------c-aa-a--ttttagtc-c-ccagg-a-agaaat----gtgg-gta--gc--ct--ggg-c-a-cccc-attt-gtggctggcat-c-tgaagt----ggg--agca-tttt-tg--t-ggg-g
i Propithecus_tattersalli.k141_790011                    C 0 I 1
s Propithecus_verreauxi.k141_956661                           2253  98 -      6182 tt--gt--------g-g-----ga----------------------------acccc-----------------------------------c-aa-a--ttttagtc-c-ccagg-a-agaaat----gtgg-gta--gc--ct--ggg-c-a-cccc-attt-gtggctggcat-c-tgaagt----ggg--agca-tttt-tg--t-ggg-g
i Propithecus_verreauxi.k141_956661                      C 0 I 1
s Psammomys_obesus.NESX01036370.1                             7094  48 -     21651 ----ta--t--ca-t-t-----ca----------------------------cctct-----------------------------------c-aa-a--atttatctag-ccagc-c-agaaat----gtaa-ata--g---------------------------------------------------------------------------
i Psammomys_obesus.NESX01036370.1                        I 1 I 99
s Pteronotus_parnellii.KE909381.1                            12585  97 -     21811 ca--cg--------g-g-----ca----------------------------ccct-----------------------------------cg-ta-t--ttgcagtcag-t-ggc-ccagaaat----gtgggg-a--gc--ct--gag-c-a-cccc-attt-gtggccag-gc-c-tgaaag----gga--ggca-gcc--ta--g-ggg-a
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         38104  93 +     42204 ca--tg--------g-g-----aa----------------------------tccc-----------------------------------ca-ga-t--ttatagctag-c-agg-acagaaat----gtgggt-a--gc--ct--gag-c-a-cccc-attt-gtggc-----ttc-tgaagt----gga--ga---gtc--tt--a-gagta
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22974687  99 +  28871421 ca--tg--------a-g-----ag----------------------------tcct-----------------------------------ca-aa-t--ttttagtcag-c-agc-acagaaat----ataggt-a--gc--ct--gag-c-a-tccc-attt-atggctgg-agtt-tgaagt----aga--ggta-gagt-ta--t-ggg-a
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1357777  99 +   4952924 ca--tg--------a-g-----ag----------------------------tcct-----------------------------------ca-aa-t--ttttagtcag-c-agc-acagaaat----ataggt-a--gc--ct--gag-c-a-tccc-attt-atggctgg-agtt-tgaagt----aga--ggta-gagt-ta--t-ggg-a
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20272181  96 -  38429054 ca--tg--------g-g-----aa----------------------------tccc-----------------------------------ca-gt-t--ttatagtcag-----g-gcagaaat----gtgggt-a--gt--ct--gag-c-agcccc-cgt--ggggctgg-catc-tgaagt----gaa--gaca-gtc--tt--t-tgata
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             11988  96 -     91421 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-tatttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ctcagtg---a-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg---------
i Pygathrix_cinerea.k141_1153803                         C 0 I 3
s Pygathrix_nigripes_b.ctg100                                 7606116  94 +   7812017 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ctcagtg---a-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg---------
i Pygathrix_nigripes_b.ctg100                               C 0 I 3
s Pygathrix_nigripes_a.k141_215492                             11964  94 -     72585 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ctcagtg---a-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg---------
i Pygathrix_nigripes_a.k141_215492                         C 0 I 3
s Rattus_norvegicus.chr16                                 53567627  45 +  90668790 ----ta--------t-g-----tg----------------------------tctct-----------------------------------c-aa-a--atgtattgag-ccctt-c-ggaaat----gtca-ata--g---------------------------------------------------------------------------
i Rattus_norvegicus.chr16                                I 1 I 83
s Rhinopithecus_bieti.k119_217274                             3671  94 -     11128 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ctcagtg---a-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg---------
i Rhinopithecus_bieti.k119_217274                        C 0 I 3
s Rhinopithecus_roxellana.NC_044550.1                     91233026  94 - 195417433 CA--AG--------G-G-----AA----------------------------CCTtc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ctcagtg---a-ccc--attt-gTGGCTGGGAT-C-TGAAGT----GGA--GGCA-GTGT-TG---------
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 3
s Rhinopithecus_strykeri.ctg102                            7668675  94 +   7961872 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ctcagtg---a-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gtgt-tg---------
i Rhinopithecus_strykeri.ctg102                          C 0 I 3
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85680  99 -     96226 ca--tg--------a-g-----ag----------------------------ccct-----------------------------------ca-aa-t--ttttagtcag-c-agc-acagaaat----gtgggt-a--gc--ct--aag-c-a-tccc-attt-gtggctgg-agtt-tgaagt----aga--ggta-gcgt-ta--t-ggg-a
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               4881 103 -      8359 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttgttgtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-c-a-accc-gttt-gtggctgccat-c-tgaagtggaggga--ggca-gtct-tg--t-gga-a
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            11189 103 -     13588 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttgttgtcag-ccagg-c-agaaat----gtgg-gta--gc--ct--ggg-c-a-accc-gttt-gtggccgccat-c-tgaagtggaggga--ggca-gtct-tg--t-gga-a
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              4827 103 -      6207 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttgttgtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-c-a-accc-gttt-gtggccgccat-c-tgaagtggaggga--ggca-gtct-tg--t-gga-a
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               10554 103 +     13640 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttgttgtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-c-a-accc-gttt-gtggctgccat-c-tgaagtggaggga--ggca-gtct-tg--t-gga-a
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               5417 103 +      8564 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttgttgtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-c-a-accc-gttt-gtggccgccat-c-tgaagtggaggga--ggca-gtct-tg--t-gga-a
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209465694 103 + 209938924 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttgttgtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-c-a-accc-gttt-gtggctgccat-c-tgaagtgggggga--ggca-gtct-tg--t-gga-a
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 4908 103 -      9399 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttgttgtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-c-a-accc-gttt-gtggccgccat-c-tgaagtggaggga--ggca-gtct-tg--t-gga-a
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 2054 103 +      3421 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttgttgtcag-ccagg-c-agaaat----gtgg-gta--gc--ct--ggg-c-a-accg-gttt-gtggccgccat-c-tgaagtggaggga--ggca-gtct-tg--t-gga-a
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119948239  99 - 121099817 CA--GG--------G-G-----AG----------------------------CCTCC-----------------------------------A-Ca-t--ttgcagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-c-a-agcc-attt-ttggctgccat-c-tgaagT----GGA--GGCA-GTCC-TG--T-GGA-A
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       20706  99 +     46362 ca--gg--------g-g-----ag----------------------------cctcc-----------------------------------a-ca-t--ttgcagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-c-a-acct-attt-ttggctgccat-c-tgaagt----gga--ggca-gtcc-tg--t-gga-a
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               20801  99 +     45824 ca--gg--------g-g-----ag----------------------------cctcc-----------------------------------a-ca-t--ttgcagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-c-a-accc-attt-ttggctgccat-c-tgaagt----gga--ggca-gtcc-tg--t-gga-a
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             37416  99 -     64574 ca--gg--------g-g-----ag----------------------------cctcc-----------------------------------a-ca-t--ttgcagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-c-a-accc-attt-ttggctgccat-c-tgaagt----gga--ggca-gtcc-tg--t-gga-a
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                                422  99 -     23631 ca--gg--------g-g-----ag----------------------------cctcc-----------------------------------a-ca-t--ttgcagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-c-a-agcc-attt-ttggctaccat-c-tgaagt----gga--ggca-gtcc-tg--t-gga-a
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 20694  99 -     61129 ca--gg--------g-g-----ag----------------------------cctcc-----------------------------------a-ca-t--ttgcagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ct--ggg-c-a-acct-attt-ttggctgccat-c-tgaagt----gga--ggca-gtcc-tg--t-gga-a
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          16499  94 -     19888 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ctcagtg---a-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gcgt-tg---------
i Semnopithecus_entellus.k141_11662                      C 0 I 3
s Semnopithecus_hypoleucos.k141_1615806                      23701  94 +     39453 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ctcagtg---a-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gcgt-tg---------
i Semnopithecus_hypoleucos.k141_1615806                  C 0 I 3
s Semnopithecus_johnii.k141_670120                            4227  94 +     27826 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ctcagtg---a-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gcgt-tg---------
i Semnopithecus_johnii.k141_670120                       C 0 I 3
s Semnopithecus_priam.k141_638794                             3748  94 -     19483 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ctcagtg---a-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gcgt-tg---------
i Semnopithecus_priam.k141_638794                        C 0 I 3
s Semnopithecus_schistaceus.k141_1584426                      3810  94 +      7198 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ctcagtg---a-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gcgt-tg---------
i Semnopithecus_schistaceus.k141_1584426                 C 0 I 3
s Semnopithecus_vetulus.k141_1200928                         12070  94 +     15514 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ctcagtg---a-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gcgt-tg---------
i Semnopithecus_vetulus.k141_1200928                     C 0 I 3
s Sigmodon_hispidus.SigHis_scaffold_60841                    10786  45 -     12148 ----ta--------c-g-----ta----------------------------cctct-----------------------------------c-aa-a--atttatttat-ccagt-c-agaaat----gtaa-ata--g---------------------------------------------------------------------------
i Sigmodon_hispidus.SigHis_scaffold_60841                I 1 I 76
s Solenodon_paradoxus.SolPar_flattened_line_126               1734  77 +   1910179 -------------------------------------------------------------------------------------------------t--ttatagtctg-c-cgc-a-agaaat----gtga-g-a--gc--ca--aca-c-a-cccc-attt-ttg--tgg-gc-c-caaaat----gga--ggca-gtc--tt--a-cag-a
i Solenodon_paradoxus.SolPar_flattened_line_126          I 3 C 0
s Spermophilus_dauricus.KZ294078.1                         1950252  98 -   3870691 ca--ta--------gga-----aa----------------------------ccctc-----------------------------------a-cg-t--gtgtactcag-ccag-ac-agaacc----atgg-gta--g-c-cc--atg-c-a-tcct-gt---gtggccggcat-c-tgaagt----gga--ggca-atct-tg--t-ggg-a
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             28629  99 +     97271 ca--ca--------g-g-----aa----------------------------tccc-----------------------------------ca-aa-t--ttatagccaa-c-agg-gcagaaat----gtgggt-a--gt--ct--gag-t-a-cccc-attt-gtgactgg-catc-tgaagt----gga--gaca-gtc--tt--a-gggta
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              16185 104 -    196729 ca--tg--------g-ctataaat----------------------------tccc-----------------------------------ca-aa-t--ttatagtcag-c-agg-gcagcaac----atgggt-a--gt--ct--caa-c-a-ctgt-gtgt-gtggctgg-catc-ggaact----gga--ggtg-gtc--tt--t-tggta
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.JH118708.1                                      33119  98 -     47482 ca--tg--------g-g-----aa----------------------------atcc-----------------------------------tg-aa-t--tcgtagtcca-c-agg-gcagaaat----gtgggt-a--ac--ct--gag-t-a-ccct-attt-atggctgc-ag-c-tgaaga----gaa--aaca-gtc-ctg--t-ggg-c
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1090276  99 -   1523678 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-ga-t--ctgtagtcag-ccagg-g-aaaaat----gtgg-gta--ga--ct--ggg-c-a-accc-atct-gtggctggcat-c-tgaaat----gga--gaca-gtct-tg--t-gga-a
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 8567  97 +     41958 ca--tg--------g-g-----aa----------------------------ccct-----------------------------------ca-aa-t---tgtagtcag-c-ggc-acagaaat----gtggag-a--ca--ct--gag-c-a-cccc-attt-gtggctgg-agtc-caaagt----gga--ggtc-gtc--tg--t-ggg-c
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      116627  98 -    156842 cc--ta--------g-g-----aa----------------------------cccc-----------------------------------ca-aa-t--tt-tagtcag-c-agg-gcagaaat----gtgggt-a--gc--ct--gag-c-a-cccc-attt-gtggccag-cgtc-tgaagg----aga--ggca-gtc-ttg--t-ggg-a
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    385079  99 +    539355 cc--tg--------g-g-----aa----------------------------cccc-----------------------------------ca-aa-t--ttgtagtcag-c-agg-acagaaat----ttaggt-a--gc--ct--gag-c-a-cccc-attt-gtggccag-tgtc-tgaagg----aga--ggca-gtc-ttg--t-ggg-a
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               23600  99 +     70052 cg--tg--------a-a-----ga----------------------------cctcc-----------------------------------a-aa-c--gtgtaggcat-ccagg-c-aaaaat----gtga-gta--gc--tt--g-g-ata-cccc-attt-gtagctggcat-c-tgacgt----ggg--agaa-atct-tg--g-cgg-a
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_2029956                               2945  99 +      4644 ca--tg--------a-a-----ga----------------------------cctcc-----------------------------------a-aa-c--gtgtaggcat-ccagg-c-aaaaat----gtga-gta--gc--tt--g-g-ata-cccc-attt-gtggctggcat-c-tgacgt----ggg--agaa-atct-tg--g-cag-a
i Tarsius_wallacei.k141_2029956                          C 0 C 0
s Theropithecus_gelada.CM009954.1                        186425393  98 + 186847797 CA--AG--------G-G-----AA----------------------------CCTCC-----------------------------------A-GA-T--TTATAGTCAG-CCAGG-C-AAAAAT----GTGG-GTA--GC---C--TGG-G-T-GACC-ATTT-GTGGCTGGGAT-C-TGAAGT----GGA--GGCA-GTGT-TG--T-GGA-A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          7800  94 -     20410 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ctcagtg---a-ccc--attt-gtggctgtgat-c-tgaagt----gga--ggca-gcgt-tg---------
i Trachypithecus_auratus.k141_722599                     C 0 I 3
s Trachypithecus_crepusculus.k141_1194022                    11995  94 +     15221 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ctcagtg---a-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gcgt-tg---------
i Trachypithecus_crepusculus.k141_1194022                C 0 I 3
s Trachypithecus_cristatus.k141_580354                        7901  94 +     19930 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ctcagtg---a-ccc--attt-gtggctgtgat-c-tgaagt----gga--ggca-gcgt-tg---------
i Trachypithecus_cristatus.k141_580354                   C 0 I 3
s Trachypithecus_francoisi.k141_1412647                       4331  94 -     19997 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ctcagtg---a-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gcgt-tg---------
i Trachypithecus_francoisi.k141_1412647                  C 0 I 3
s Trachypithecus_geei.k141_277701                            44451  94 -     60166 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ctcagtg---a-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gcgt-tg---------
i Trachypithecus_geei.k141_277701                        C 0 I 3
s Trachypithecus_germaini.k141_912491                        11922  94 -     27529 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ctcagtg---a-ccc--attt-gtggctgtgat-c-tgaagt----gga--ggca-gcgt-tg---------
i Trachypithecus_germaini.k141_912491                    C 0 I 3
s Trachypithecus_hatinhensis.k141_143409                     11864  94 -     18194 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ctcagtg---a-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gcgt-tg---------
i Trachypithecus_hatinhensis.k141_143409                 C 0 I 3
s Trachypithecus_laotum.k141_907409                           5598  94 -     21137 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ctcagtg---a-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gcgt-tg---------
i Trachypithecus_laotum.k141_907409                      C 0 I 3
s Trachypithecus_leucocephalus.k141_587342                    4301  94 -     10723 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ctcagtg---a-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gcgt-tg---------
i Trachypithecus_leucocephalus.k141_587342               C 0 I 3
s Trachypithecus_melamera.k141_434728                         3453  94 +      9834 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ctcagtg---a-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gcgt-tg---------
i Trachypithecus_melamera.k141_434728                    C 0 I 3
s Trachypithecus_obscurus.k141_190785                        21768  94 +     32220 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ctcagtg---a-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gcgt-tg---------
i Trachypithecus_obscurus.k141_190785                    C 0 I 3
s Trachypithecus_phayrei.ctg124                            5935868  94 +   6242583 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ctcagtg---a-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gcgt-tg---------
i Trachypithecus_phayrei.ctg124                          C 0 I 3
s Trachypithecus_pileatus.k141_2007326                        5116  94 +     20839 ca--ag--------g-g-----aa----------------------------cctcc-----------------------------------a-aa-t--ttatagtcag-ccagg-c-aaaaat----gtgg-gta--gc--ctcagtg---a-ccc--attt-gtggctgggat-c-tgaagt----gga--ggca-gcgt-tg---------
i Trachypithecus_pileatus.k141_2007326                   C 0 I 3
s Tupaia_chinensis.KB320699.1                              2152340  92 +   4065304 ct--tg--------g-g-----aa----------------------------ccc-c-----------------------------------a-aa-t--ttgtc----a-ccagg-c-ataaat----gtgg-gtc--act-c---gag---a-gcct--tgtcgtg-ctgacac-c-taacat----gga--ggca-gtcg-cg--t-cag-a
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     5653  92 -     10553 ct--tg--------g-g-----aa----------------------------ccc-c-----------------------------------g-aa-t--ttgtt----a-ccacg-c-ataaag----gtgg-gtc--act-c---gag---a-gcct--tgtcgtg-ctgacac-c-taacat----gaa--ggca-gtca-tg--t-cag-a
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4848337  84 -   5085361 ca--tg--------a-g-----aa----------------------------tccc-----------------------------------ca-ca-t--ttatagccag-c-agg-gcagaaat----gtgggt-a--gc--ct--gag-t-a-ctcc-attt-gtggctgg-tatc-tgaagt----gga-----------------------
i Ursus_maritimus.KK499267.1                             C 0 I 7
s Varecia_rubra.k141_590885                                   8884  97 +     50397 tt--gt--------a-g-----ga----------------------------cccct-----------------------------------a-aa-t--ttgtaatc-c-ccagg-a-agaaat----gtgg-gta--gc--ct--ggg-c-a-cccc-attt-gtggctggcat-c-tgaagt----agg--agca-gtct-tg--tggg---
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              8938  97 +     24756 tt--gt--------a-g-----ga----------------------------cccct-----------------------------------a-aa-t--ttgtaatc-c-ccagg-a-agaaat----gtgg-gta--gc--ct--ggg-c-a-cccc-attt-gtggctggcat-c-tgaagt----agg--agca-gtct-tg--tggg---
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5369793  99 -   5488506 ga--cg--------g-g-----aa----------------------------acct-----------------------------------tg-aa-t--ttgtagtcat-c-ggg-gcagaagt----gtgggt-a--gc--ct--gag-c-a-cccc-attt-gtggctgg-catc-tgaaga----gaa--agca-gtc-ttg--t-ggg-a
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  8796  99 -     43706 ca--tg--------g-g-----aa----------------------------tccc-----------------------------------ca-aa-t--ttatagccag-c-agg-gcaaaaat----gtgggt-a--gc--ct--gag-t-a-cc-tcattt-gtggctgg-catc-tgaagt----gga--gaca-gtc--tt--a-tggta
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        21629  98 -     24430 ca--ta--------gga-----aa----------------------------ccctc-----------------------------------a-ca-t--gtgtactcag-ccag-ac-agaatc----acgg-gta--g-c-cc--atg-c-a-tcct-gt---gtggctggcat-c-tgaagt----gga--ggca-gttt-tg--t-agg-a
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          3030  99 +     86975 ca--tg--------g-g-----aa----------------------------tccc-----------------------------------ca-aa-t--ttatagccag-c-atg-gcagaaat----gtgggt-a--tc--ct--gag-t-a-cccc-attt-gtggctgg-catc-tgaagt----gga--gaca-gtc--tt--a-tgata
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Sapajus_macrocephalus.k141_351809                          54316   0 -     80660 C
e Sapajus_apella.ctg103                                    5419275   0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519   0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188   0 +      1777 C
e Cebus_albifrons.Contig27                                25650611   0 +  26074798 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906   0 -     10935 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276   0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383   9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584   0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641   0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553   7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   2809   0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937   0 +    114563 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 70244   0 +    116680 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183  10 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482  20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968   0 +     55207 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10240   0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090   0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823   1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384   0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813   0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690  60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385   0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468   0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491   0 +  44047080 C
e Oryctolagus_cuniculus.CM000791.1                        67144574  44 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387               7328  41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345   0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229   0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831   4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422   0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805   0 +       996 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186890   0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33016   1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456   1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390   1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692   1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520   1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379  13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466   0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363   0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686   0 +   8254450 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009   7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961   0 +     10310 C
e Loxodonta_africana.GL010049.1                            4214777   0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344   0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3730  44 -     14121 I
e Lasiurus_borealis.LasBor_scaffold_32767                    12872  41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650   0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293   0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626   0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547   0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577   3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491   0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051   0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516   0 +     36099 C
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312   0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689   0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752   0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447   1 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1089268   0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347   0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175   0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084   0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495   7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076   0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            61949   0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923   0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569   0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Crocidura_indochinensis.CroInd_scaffold_287352              1624   0 +      4208 I
e Condylura_cristata.JH655891.1                           17547132   5 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            171068   0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15969   0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498   0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            5641   0 -      6351 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291   0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417   0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157   0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465   7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030   0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310   0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682   0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014   0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932   0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376   0 +  48749331 C
e Bison_bison.KN261452.1                                    200171   0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115   0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905   0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440   0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102   7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675   0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691   7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192   0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       3675 6 +     62944 CCAAGT
s Acinonyx_jubatus.LLWD01001279.1                           825281 6 -   1699592 ctgagc
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 37
s Ailuropoda_melanoleuca.LNAT01000098.1                    9508530 6 -  29979442 ctgagc
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 40
s Ailurus_fulgens.LNAC01001112.1                             77317 6 -    347723 ctgaac
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 40
s Allactaga_bullata.AllBul_scaffold_9566                     71546 6 -     89534 tcatgc
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 33
s Allenopithecus_nigroviridis.k141_3361533                   11593 6 -     52922 ccaagt
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         11527 6 -     28001 ccaagt
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          1973 6 -     18505 ccaagt
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           2822 6 -     12518 ccaagt
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                               428 6 -     27731 ccaagt
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                 551 6 +      3134 ccaagt
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                                689 6 -     45847 ccaagt
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                21893 6 +     25266 ccaagt
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           1077 6 +      2906 ccaagt
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            15190 6 -     18578 ccaagt
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                               579 6 +     47717 ccaagt
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                              708 6 -      3544 ccaagt
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             11927 6 +     50774 ccaagt
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  12555 6 -     33861 ccaagt
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            12576 6 -     34016 ccaagt
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4294971 6 -   5030052 ccaagT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             12577 6 -     34685 ccaagt
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               25698 6 -     47192 ccaagt
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       9215 6 +     20879 ctgagc
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 35
s Arctocebus_calabarensis.k141_288239                        16772 6 +     17124 ctgagc
i Arctocebus_calabarensis.k141_288239                    C 0 I 39
s Avahi_laniger.k141_765380                                  51235 6 -     92717 ctgagc
i Avahi_laniger.k141_765380                              I 1 I 39
s Avahi_peyrierasi.k141_1424874                              51864 6 +     85213 ctgagc
i Avahi_peyrierasi.k141_1424874                          I 1 I 39
s Callibella_humilis.k141_1278103                             2323 6 -     10423 ccaagT
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             21815 6 +     31915 ccaagt
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            2293 6 +      5267 ccaagT
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23587506 6 - 189096842 CCAAGT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              9037 6 -     12001 ccaagT
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10000392 6 -  17673402 ctgagc
i Camelus_bactrianus.KN276810.1                          C 0 I 40
s Camelus_dromedarius.KN272107.1                           2332856 6 -   7040546 ctgagc
i Camelus_dromedarius.KN272107.1                         C 0 I 40
s Camelus_ferus.KB017975.1                                  401132 6 -   1652518 ctgagc
i Camelus_ferus.KB017975.1                               C 0 I 40
s CanFam4.chr16                                           17797279 6 -  60362399 ctgagc
i CanFam4.chr16                                          C 0 I 40
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    183336 6 -    185531 ctgagc
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 I 40
s Canis_lupus_dingo.QKWQ01000480.1                         9032722 6 -   9314153 ctgagc
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 40
s Canis_lupus_familiaris.chr16                            17956987 6 -  59632846 ctgagc
i Canis_lupus_familiaris.chr16                           C 0 I 40
s Canis_lupus_orion.HG994398.1                            18498287 6 +  63665305 ctgagc
i Canis_lupus_orion.HG994398.1                           C 0 I 40
s Carlito_syrichta.NW_007259797.1                           153591 6 -    496798 TTGagG
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    135648 6 +    179628 ccaaac
i Castor_canadensis.CasCan_scaffold_2074                 I 13 I 36
s Catagonus_wagneri.CatWag_scaffold_2839                     90721 6 +    217609 ctgagc
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 40
s Cebuella_niveiventris.k141_1251222                          6947 6 -     11392 ccaagT
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               3045 6 -      7577 ccaagT
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         3090 6 +     31688 ttgggg
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12229398 6 +  27778364 ctgagc
i Ceratotherium_simum.JH767749.1                         C 0 I 40
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634            425 6 -     25243 ctgagc
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 I 40
s Cercocebus_atys.KQ010504.1                               4472552 6 +   4669795 CCAAGT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        11099 6 -     19203 ccaagt
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           5521 6 +      8260 ccaagt
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           5748 6 +     27781 ccaagt
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         5904 6 -     20310 ccaagt
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           8888 6 +     29689 ccaagt
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            3316 6 +      9989 ccaagT
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          11565 6 -     27936 ccaagt
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                             437 6 -     17152 ccaagt
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38813970 6 +  39242232 ccaagt
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21219666 6 -  21565898 ccaagt
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       36785 6 -     53127 ccaagt
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        4071 6 +      7159 ccaagt
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       11588 6 -     27947 ccaagt
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         11561 6 +     17596 ccaagt
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                           786 6 +     26000 ccaagT
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             18662 6 -     52598 ctgagc
i Cheirogaleus_major.k141_333249                         C 0 I 39
s Cheirogaleus_medius.k141_1055463                           14012 6 +     57038 ctgagc
i Cheirogaleus_medius.k141_1055463                       C 0 I 39
s Chiropotes_albinasus.k141_2813271                           7959 6 +     11226 ccaagt
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18425526 6 -  18827391 ccaagt
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       11967 6 -     50209 ccaagt
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135418973 6 + 135778131 CCAAGT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1907487 6 +   2368649 TCAAGT
i Colobus_angolensis.KN981557.1                          I 3 C 0
s Colobus_guereza.LG01                                   199947159 6 + 200372422 tcaagt
i Colobus_guereza.LG01                                   I 3 C 0
s Colobus_polykomos.k141_906115                              34031 6 +     84244 tcaagt
i Colobus_polykomos.k141_906115                          I 3 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          11971 6 -     20389 ctgagc
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 40
s Cryptoprocta_ferox.CryFer_flattened_line_16129             26454 6 -     87169 ctaaga
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 40
s Ctenodactylus_gundi.CteGun_scaffold_65                    834726 6 +   1526836 cagagc
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 36
s Daubentonia_madagascariensis.ctg71                      12534839 6 -  12879189 ctgagc
i Daubentonia_madagascariensis.ctg71                     C 0 I 39
s Dicerorhinus_sumatrensis.PEKH010002091.1                  671250 6 +   1390856 ctgaac
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 40
s Diceros_bicornis.DicBicMic_scaffold_5955                    4006 6 +    198055 ctgagc
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 40
s Eidolon_helvum.KE759718.1                                   8511 6 +     11740 ctgagc
i Eidolon_helvum.KE759718.1                              C 0 I 21
s Enhydra_lutris.KZ291758.1                               16327292 6 -  41312741 ctgacc
i Enhydra_lutris.KZ291758.1                              C 0 I 40
s Equus_asinus.JREZ01000139.1                              1281304 6 +   4378816 ctgagc
i Equus_asinus.JREZ01000139.1                            C 0 I 40
s Equus_caballus.CM000403.2                               18529124 6 -  39960074 ctgagc
i Equus_caballus.CM000403.2                              C 0 I 41
s Equus_przewalskii.KK951119.1                               31139 6 +    498745 ctgagc
i Equus_przewalskii.KK951119.1                           C 0 I 41
s Erythrocebus_patas.Contig38                             21202168 6 -  21539334 ccaagt
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              11344 6 -     14127 ctgaga
i Eulemur_albifrons.k141_342033                          C 0 I 39
s Eulemur_collaris.k141_377015                                4042 6 -     16928 ctgaga
i Eulemur_collaris.k141_377015                           C 0 I 39
s Eulemur_coronatus.k141_885031                              13075 6 -     25546 ctgagc
i Eulemur_coronatus.k141_885031                          C 0 I 39
s Eulemur_flavifrons.k141_1184614                            10260 6 +     26330 ctgagc
i Eulemur_flavifrons.k141_1184614                        C 0 I 39
s Eulemur_fulvus.k141_544389                                 11508 6 +     23973 ctgaga
i Eulemur_fulvus.k141_544389                             C 0 I 39
s Eulemur_macaco.k141_1562045                                10260 6 +     75513 ctgagc
i Eulemur_macaco.k141_1562045                            C 0 I 39
s Eulemur_mongoz.k141_232305                                  8211 6 +     97555 ctgaga
i Eulemur_mongoz.k141_232305                             C 0 I 39
s Eulemur_rubriventer.k141_571033                            11138 6 +     26496 ctgagc
i Eulemur_rubriventer.k141_571033                        C 0 I 39
s Eulemur_rufus.k141_1476633                                  1744 6 -     17153 ctgaga
i Eulemur_rufus.k141_1476633                             C 0 I 39
s Eulemur_sanfordi.k141_1122526                              11320 6 +    111500 ctgaga
i Eulemur_sanfordi.k141_1122526                          C 0 I 39
s Felis_catus.CM001381.2                                  20235147 6 + 206538554 ctgagc
i Felis_catus.CM001381.2                                 C 0 I 37
s Felis_catus_fca126.CM031415.1                           20193991 6 + 205367284 ctgagc
i Felis_catus_fca126.CM031415.1                          C 0 I 37
s Felis_nigripes.FelNig_flattened_line_20823                  7503 6 -     36744 ctgagc
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 37
s Galago_moholi.ctg2040                                     423586 6 -    453645 CTGAGC
i Galago_moholi.ctg2040                                  I 3 I 24
s Galago_senegalensis.k141_631886                             1293 6 +     11339 CTGAGT
i Galago_senegalensis.k141_631886                        I 3 I 24
s Galagoides_demidoff.k141_1959596                            5101 6 +      6795 ctgagc
i Galagoides_demidoff.k141_1959596                       C 0 I 24
s Galeopterus_variegatus.GalVar_scaffold_266699               1804 6 +      2098 ctgagt
i Galeopterus_variegatus.GalVar_scaffold_266699          C 0 I 39
s Gorilla_beringei.k141_3596273                              12928 6 -     32273 ccaagt
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186335076 6 + 186649187 ccaagt
i Gorilla_gorilla.LT578341.1                             I 127 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   32083 6 +     78134 ctgcgc
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 34
s Hapalemur_alaotrensis.k141_1720546                         43222 6 +     55949 ctgagc
i Hapalemur_alaotrensis.k141_1720546                     I 145 I 40
s Hapalemur_gilberti.k141_339145                             25924 6 +     40576 ctgagc
i Hapalemur_gilberti.k141_339145                         I 204 n 42
s Hapalemur_griseus.k141_305293                              17842 6 +     29761 ctgagc
i Hapalemur_griseus.k141_305293                          I 204 n 42
s Hapalemur_meridionalis.k141_659797                         43239 6 -     73828 ctgagc
i Hapalemur_meridionalis.k141_659797                     I 204 n 42
s Hapalemur_occidentalis.k141_380049                         32013 6 -     62596 ctgagc
i Hapalemur_occidentalis.k141_380049                     I 145 I 40
s Helogale_parvula.HelPar_flattened_line_2585               240290 6 +    327341 ctaaga
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 40
s Hipposideros_armiger.JXIK01000431.1                       109788 6 +   1711038 ctgagc
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 39
s Hipposideros_galeritus.HipGal_scaffold_29171               41210 6 +     43066 ctgagc
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 I 39
s Hoolock_leuconedys.ctg274                                    431743 6 +    630532 ccaagt
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  42431 6 +     55795 ctaaga
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 40
s Hylobates_agilis.k141_307679                               14677 6 -     15490 ccaagt
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              56683 6 +     67168 ccaagt
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189540333 6 - 191637585 ccaagt
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3333227 6 -  11177569 ccaagt
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7517266 6 -   7955117 ttgaga
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 36
s Indri_indri.k141_3655594                                   20092 6 +     31101 ctgagc
i Indri_indri.k141_3655594                               I 1 I 39
s Jaculus_jaculus.JH725527.1                               8276185 6 -   9596543 TCATGC
i Jaculus_jaculus.JH725527.1                             C 0 I 31
s Lemur_catta.scaffold_24                                 15521648 6 -  30322482 ctgtac
i Lemur_catta.scaffold_24                                C 0 I 36
s Leontocebus_fuscicollis.k141_1820339                        4679 6 +     64341 CCAagt
i Leontocebus_fuscicollis.k141_1820339                   I 19 C 0
s Leontocebus_illigeri.k141_3350179                           1739 6 +      4941 CCAagt
i Leontocebus_illigeri.k141_3350179                      I 19 C 0
s Leontocebus_nigricollis.k141_4610752                        4607 6 +     35603 CCAagt
i Leontocebus_nigricollis.k141_4610752                   I 19 C 0
s Leontopithecus_chrysomelas.k141_1519602                    26084 6 +     38576 ccaagT
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         22781 6 +     66356 ccaagT
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          8528 6 -     23766 ctgagc
i Lepilemur_ankaranensis.k141_596936                     C 0 I 39
s Lepilemur_dorsalis.k141_577674                             26475 6 +     45836 ctgagc
i Lepilemur_dorsalis.k141_577674                         C 0 I 39
s Lepilemur_ruficaudatus.k141_320948                           698 6 -      1719 ctgagc
i Lepilemur_ruficaudatus.k141_320948                     C 0 I 39
s Lepilemur_septentrionalis.k141_185316                      24530 6 +     54090 ctgagc
i Lepilemur_septentrionalis.k141_185316                  C 0 I 39
s Leptonychotes_weddellii.KB714746.1                       3040430 6 +   3914936 ctgagc
i Leptonychotes_weddellii.KB714746.1                     C 0 I 40
s Lophocebus_aterrimus.ctg367                              1434097 6 +   1826925 ccaagt
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            3033 6 +     11245 ctgagc
i Loris_lydekkerianus.k141_2539221                       I 34 I 38
s Loris_tardigradus.ctg83                                  1001871 6 +   6120653 ctgagc
i Loris_tardigradus.ctg83                                I 34 I 38
s Lycaon_pictus.CM007581.1                                17953227 6 -  59628241 ctgagc
i Lycaon_pictus.CM007581.1                               C 0 I 40
s Macaca_arctoides.k141_2326796                               3918 6 +     40492 ccaagt
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59673172 6 +  60120075 ccaagt
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  9674 6 -     26193 ccaggt
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            77470 6 -    114318 ccaagt
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  3185 6 -     23192 ccaggt
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                12637 6 -     29190 ccaggt
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  21205 6 +     37952 ccaggt
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186836293 6 + 187317192 CCAGGT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25454856 6 -  25927173 CCAGGT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  77054 6 +     89720 ccaggt
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 4051 6 +     20474 ccaagt
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   3853 6 -     14993 ccaggt
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  326723 6 -    668171 ccaggt
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 2155 6 -     24072 ccaagt
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               22792 6 -     45290 ccaggt
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88587 6 +     94391 ctgagc
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 21
s Mandrillus_leucophaeus.scaffold280                      23934371 6 -  24302211 ccaagt
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               348504 6 +    752769 ccaagt
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33099578 6 -  40650429 ttgagc
i Marmota_marmota.CZRN01000018.1                         C 0 I 36
s Megaderma_lyra.MegLyr_scaffold_4542                         8320 6 -    207569 ctaaga
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 42
s Mellivora_capensis.MelCap_flattened_line_69365              8004 6 +     13704 ctgacc
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 40
s Mico_argentatus.k141_1239457                                2869 6 -      7380 ccaagT
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               1939 6 +     18990 ccaagT
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      2874 6 -      7356 ccaagT
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18289035 6 -  93316391 ctgagc
i Microcebus_murinus.CM007674.1                          C 0 I 39
s Miopithecus_ogouensis.k141_534055                           6094 6 -     28506 ccaagt
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         3267 6 -      8324 ctgagc
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 42
s Mirza_zaza.k141_952172                                      6604 6 -     37649 ctgagc
i Mirza_zaza.k141_952172                                 C 0 I 39
s Mormoops_blainvillei.MorMeg_scaffold_1417                 139289 6 -    366855 ccaagt
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 37
s Mungos_mungo.MunMun_flattened_line_23663                   33395 6 +     37127 ctaaga
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 40
s Muscardinus_avellanarius.MusAve_scaffold_82313              4364 6 +     14296 ctgctc
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 29
s Mustela_putorius.JH418006.1                               299185 6 -  14710649 ctgacc
i Mustela_putorius.JH418006.1                            C 0 I 40
s Nasalis_larvatus.k141_413338                               12089 6 +     21681 ccaagt
i Nasalis_larvatus.k141_413338                           I 3 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    757878 6 +    783361 ctgggt
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 35
s Nyctereutes_procyonoides.CAJHUB010000658.1               9147487 6 -   9404916 ctgagc
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 40
s Nycticebus_bengalensis.LG01                            102576811 6 - 196305487 ccgagc
i Nycticebus_bengalensis.LG01                            C 0 I 38
s Nycticebus_coucang.k141_5327727                             4497 6 +      8486 ccgagc
i Nycticebus_coucang.k141_5327727                        C 0 I 38
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105747238 6 + 199412804 ccgagc
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 38
s Odobenus_rosmarus.KB229312.1                              504573 6 -   2017862 ctgagc
i Odobenus_rosmarus.KB229312.1                           I 51 I 40
s Otocyon_megalotis.JAEUCK010005147.1                       460242 6 -    559221 ctgagc
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 40
s Otolemur_crassicaudatus.k141_222918                         1128 6 +      8798 ctgagc
i Otolemur_crassicaudatus.k141_222918                    C 0 I 24
s Otolemur_garnettii.GL873799.1                             693295 6 -   1103335 CTGAGC
i Otolemur_garnettii.GL873799.1                          C 0 I 24
s Pan_paniscus.KQ411613.1                                    41027 6 +     80009 CCAAGT
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189139938 6 + 189151597 CCAAGT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  149155 6 +    230217 ctgagc
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 37
s Panthera_pardus.KV860321.1                                262362 6 +  18783137 ctgagc
i Panthera_pardus.KV860321.1                             C 0 I 37
s Panthera_tigris.KE722367.1                               4718998 6 -   8748460 ctgagc
i Panthera_tigris.KE722367.1                             C 0 I 37
s Papio_anubis.CM001495.2                                183440126 6 + 183742232 CCAAGT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             3819 6 +     20448 ccaagt
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20560624 6 +  20919399 ccaagt
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   2562 6 +     41871 ccaagt
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     5848 6 +     27711 ccaagt
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  5927 6 +      9205 ccaagt
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10621 6 -     78924 ctgagc
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 40
s Perodicticus_ibeanus.k141_855320                            7005 6 +     13100 ctgagc
i Perodicticus_ibeanus.k141_855320                       C 0 I 39
s Perodicticus_potto.k141_1092580                             5378 6 +     25941 ctgagc
i Perodicticus_potto.k141_1092580                        C 0 I 39
s Piliocolobus_badius.k141_1234363                           40603 6 +     62158 ccaagt
i Piliocolobus_badius.k141_1234363                       I 3 C 0
s Piliocolobus_gordonorum.k141_381342                        35325 6 +     89929 ccaagt
i Piliocolobus_gordonorum.k141_381342                    I 3 C 0
s Piliocolobus_kirkii.k141_448987                            36741 6 +     51399 ccaagt
i Piliocolobus_kirkii.k141_448987                        I 3 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14292979 6 -  14605196 CCAAGT
i Piliocolobus_tephrosceles.PDMG02000141.1               I 3 C 0
s Pongo_abelii.CM009266.2                                189128052 6 + 189387572 CCAAGT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9567660 6 +   9816681 ccaagt
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               70253 6 -     81375 ccaagt
i Presbytis_comata.k141_677006                           I 3 C 0
s Presbytis_mitrata.k141_1087752                              2073 6 +     19060 ccaagt
i Presbytis_mitrata.k141_1087752                         I 3 C 0
s Prolemur_simus.MPIZ01000849.1                            3564044 6 -   3616207 ctgagc
i Prolemur_simus.MPIZ01000849.1                          I 192 n 42
s Propithecus_coquerelli.NW_012148875.1                     988289 6 +   2598838 CTGAGC
i Propithecus_coquerelli.NW_012148875.1                  I 1 I 39
s Propithecus_coronatus.k141_347390                          26599 6 +     38485 ctgagc
i Propithecus_coronatus.k141_347390                      I 1 I 39
s Propithecus_diadema.k141_357118                             2760 6 +      4256 ctgagc
i Propithecus_diadema.k141_357118                        I 1 I 39
s Propithecus_edwardsi.k141_1176054                          24120 6 +     35766 ctgagc
i Propithecus_edwardsi.k141_1176054                      I 1 I 39
s Propithecus_perrieri.k141_1200571                           2302 6 -     24134 ctgagc
i Propithecus_perrieri.k141_1200571                      I 1 I 39
s Propithecus_tattersalli.k141_790011                        26115 6 -     67325 ctgagc
i Propithecus_tattersalli.k141_790011                    I 1 I 39
s Propithecus_verreauxi.k141_956661                           2352 6 -      6182 ctgagc
i Propithecus_verreauxi.k141_956661                      I 1 I 39
s Pteronotus_parnellii.KE909381.1                            12682 6 -     21811 ctgagt
i Pteronotus_parnellii.KE909381.1                        C 0 I 36
s Pteronura_brasiliensis.PteBra_flattened_line_31117         38197 6 +     42204 ctgacc
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 40
s Pteropus_alecto.KB030862.1                              22974786 6 +  28871421 ctgagc
i Pteropus_alecto.KB030862.1                             C 0 I 21
s Pteropus_vampyrus.KN525825.1                             1357876 6 +   4952924 ctgagg
i Pteropus_vampyrus.KN525825.1                           C 0 I 20
s Puma_concolor.QAVW01001104.1                            20272277 6 -  38429054 ctgagc
i Puma_concolor.QAVW01001104.1                           C 0 I 37
s Pygathrix_cinerea.k141_1153803                             12087 6 -     91421 ccaagt
i Pygathrix_cinerea.k141_1153803                         I 3 C 0
s Pygathrix_nigripes_b.ctg100                                 7606213 6 +   7812017 ccaagt
i Pygathrix_nigripes_b.ctg100                               I 3 C 0
s Pygathrix_nigripes_a.k141_215492                             12061 6 -     72585 ccaagt
i Pygathrix_nigripes_a.k141_215492                         I 3 C 0
s Rhinopithecus_bieti.k119_217274                             3768 6 -     11128 ccaagt
i Rhinopithecus_bieti.k119_217274                        I 3 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91233123 6 - 195417433 CCAAGT
i Rhinopithecus_roxellana.NC_044550.1                    I 3 C 0
s Rhinopithecus_strykeri.ctg102                            7668772 6 +   7961872 ccaagt
i Rhinopithecus_strykeri.ctg102                          I 3 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85779 6 -     96226 ctgagc
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 21
s Saguinus_bicolor.k141_2619299                               4984 6 -      8359 ccaagt
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            11292 6 -     13588 ccaagt
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              4930 6 -      6207 ccaagt
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               10657 6 +     13640 ccaagt
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               5520 6 +      8564 ccaagt
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209465797 6 + 209938924 ccaagt
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 5011 6 -      9399 ccaagt
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 2157 6 +      3421 ccaagt
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119948338 6 - 121099817 CCAAGT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       20805 6 +     46362 ccaagt
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               20900 6 +     45824 ccaagt
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             37515 6 -     64574 ccaagt
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                                521 6 -     23631 ccaagt
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 20793 6 -     61129 ccaagt
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          16596 6 -     19888 ccaagt
i Semnopithecus_entellus.k141_11662                      I 3 C 0
s Semnopithecus_hypoleucos.k141_1615806                      23798 6 +     39453 ccaagt
i Semnopithecus_hypoleucos.k141_1615806                  I 3 C 0
s Semnopithecus_johnii.k141_670120                            4324 6 +     27826 ccaagt
i Semnopithecus_johnii.k141_670120                       I 3 C 0
s Semnopithecus_priam.k141_638794                             3845 6 -     19483 ccaagt
i Semnopithecus_priam.k141_638794                        I 3 C 0
s Semnopithecus_schistaceus.k141_1584426                      3907 6 +      7198 ccaagt
i Semnopithecus_schistaceus.k141_1584426                 I 3 C 0
s Semnopithecus_vetulus.k141_1200928                         12167 6 +     15514 ccaagt
i Semnopithecus_vetulus.k141_1200928                     I 3 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               1811 6 +   1910179 atgagc
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 28
s Spermophilus_dauricus.KZ294078.1                         1950350 6 -   3870691 ttgagc
i Spermophilus_dauricus.KZ294078.1                       C 0 I 36
s Spilogale_gracilis.SpiGra_flattened_line_13525             28728 6 +     97271 tggaac
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 21
s Suricata_suricatta.SurSur_flattened_line_6629              16289 6 -    196729 ctaaga
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 40
s Sus_scrofa.JH118708.1                                      33217 6 -     47482 ctgagc
i Sus_scrofa.JH118708.1                                  C 0 I 41
s Symphalangus_syndactylus.tarseq_199                      1090375 6 -   1523678 ccaagt
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 8664 6 +     41958 ctgagc
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 12
s Tapirus_indicus.TapInd_scaffold_9301                      116725 6 -    156842 ctgagc
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 40
s Tapirus_terrestris.TapTer_scaffold_755                    385178 6 +    539355 ctgagc
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 40
s Tarsius_lariang.k141_2201908                               23699 6 +     70052 ttgagt
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_2029956                               3044 6 +      4644 ttgagt
i Tarsius_wallacei.k141_2029956                          C 0 C 0
s Theropithecus_gelada.CM009954.1                        186425491 6 + 186847797 CCAAGT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          7897 6 -     20410 ccaagt
i Trachypithecus_auratus.k141_722599                     I 3 C 0
s Trachypithecus_crepusculus.k141_1194022                    12092 6 +     15221 ccaagt
i Trachypithecus_crepusculus.k141_1194022                I 3 C 0
s Trachypithecus_cristatus.k141_580354                        7998 6 +     19930 ccaagt
i Trachypithecus_cristatus.k141_580354                   I 3 C 0
s Trachypithecus_francoisi.k141_1412647                       4428 6 -     19997 ccaagt
i Trachypithecus_francoisi.k141_1412647                  I 3 C 0
s Trachypithecus_geei.k141_277701                            44548 6 -     60166 ccaagt
i Trachypithecus_geei.k141_277701                        I 3 C 0
s Trachypithecus_germaini.k141_912491                        12019 6 -     27529 ccaagt
i Trachypithecus_germaini.k141_912491                    I 3 C 0
s Trachypithecus_hatinhensis.k141_143409                     11961 6 -     18194 ccaagt
i Trachypithecus_hatinhensis.k141_143409                 I 3 C 0
s Trachypithecus_laotum.k141_907409                           5695 6 -     21137 ccaagt
i Trachypithecus_laotum.k141_907409                      I 3 C 0
s Trachypithecus_leucocephalus.k141_587342                    4398 6 -     10723 ccaagt
i Trachypithecus_leucocephalus.k141_587342               I 3 C 0
s Trachypithecus_melamera.k141_434728                         3550 6 +      9834 ccaagt
i Trachypithecus_melamera.k141_434728                    I 3 C 0
s Trachypithecus_obscurus.k141_190785                        21865 6 +     32220 ccaagt
i Trachypithecus_obscurus.k141_190785                    I 3 C 0
s Trachypithecus_phayrei.ctg124                            5935965 6 +   6242583 ccaagt
i Trachypithecus_phayrei.ctg124                          I 3 C 0
s Trachypithecus_pileatus.k141_2007326                        5213 6 +     20839 ccaagt
i Trachypithecus_pileatus.k141_2007326                   I 3 C 0
s Tupaia_chinensis.KB320699.1                              2152432 6 +   4065304 ctgagt
i Tupaia_chinensis.KB320699.1                            C 0 I 20
s Tupaia_tana.TupTan_flattened_line_97126                     5745 6 -     10553 ctgagt
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 20
s Ursus_maritimus.KK499267.1                               4848428 6 -   5085361 ctgagc
i Ursus_maritimus.KK499267.1                             I 7 I 40
s Varecia_rubra.k141_590885                                   8981 2 +     50397 ----gc
i Varecia_rubra.k141_590885                              C 0 I 41
s Varecia_variegata.k141_1128296                              9035 2 +     24756 ----gc
i Varecia_variegata.k141_1128296                         C 0 I 41
s Vicugna_pacos.KN270157.1                                 5369892 6 -   5488506 ctgagc
i Vicugna_pacos.KN270157.1                               C 0 I 40
s Vulpes_lagopus.VulLag_flattened_line_30954                  8895 6 -     43706 ctgagc
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 40
s Xerus_inauris.XerIna_scaffold_48378                        21727 6 -     24430 ttgagc
i Xerus_inauris.XerIna_scaffold_48378                    C 0 I 36
s Zalophus_californianus.ZalCal_flattened_line_17732          3129 6 +     86975 ctgagc
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 40
e Sapajus_macrocephalus.k141_351809                          54316 0 -     80660 C
e Sapajus_apella.ctg103                                    5419275 0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519 0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188 0 +      1777 C
e Cebus_albifrons.Contig27                                25650611 0 +  26074798 C
e Mus_pahari.LT608297.1                                   31351864 95 -  89631738 I
e Mus_spretus.CM004101.1                                  90749657 94 - 130317789 I
e Mus_musculus.chr8                                       87647579 94 - 129401213 I
e Mus_caroli.LT608237.1                                   84358590 94 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906 0 -     10935 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383 9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553 7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   2809 0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937 0 +    114563 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 70244 0 +    116680 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    10831 76 -     12148 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rattus_norvegicus.chr16                                 53567672 83 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Psammomys_obesus.NESX01036370.1                             7142 99 -     21651 I
e Procavia_capensis.ProCapCap_scaffold_85530                 10240 0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823 1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813 0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18191410 90 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Oryctolagus_cuniculus.CM000791.1                        67144574 44 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    76811 90 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   21735 90 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1360593 56 +   3988456 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805 0 +       996 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186890 0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33016 1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456 1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390 1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692 1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520 1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686 0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11257619 90 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009 7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12179994 90 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 29495 104 +    140813 I
e Manis_pentadactyla.KN006162.1                              48816 35 -    317179 I
e Manis_javanica.JSZB01003497.1                              17431 35 +    737560 I
e Loxodonta_africana.GL010049.1                            4214777 0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3730 44 -     14121 I
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547 0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491 0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447 1 -  14770903 I
e Ellobius_talpinus.LOJH01109367.1                            3163 90 -      6299 I
e Ellobius_lutescens.LOEQ01008920.1                          17109 90 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089268 0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084 0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495 7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            61949 0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Crocidura_indochinensis.CroInd_scaffold_287352              1624 0 +      4208 I
e Cricetulus_griseus.LT883664.1                           11664921 90 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 47583 90 +     63868 I
e Condylura_cristata.JH655891.1                           17547132 5 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            171068 0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15969 0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498 0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            5641 0 -      6351 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157 0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465 7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102 7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691 7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     67879 93 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       3681 11 +     62944 GT--CA-G-AATG-----GA
s Acinonyx_jubatus.LLWD01001279.1                           825324  7 -   1699592 gt--ca-g-aa---------
i Acinonyx_jubatus.LLWD01001279.1                        I 37 I 5
s Acomys_cahirinus.AcoCah_scaffold_12655                     67972  7 +     87051 gt--ca-a-aa---------
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 93 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9508576  7 -  29979442 gt--ca-g-aa---------
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 40 I 5
s Ailurus_fulgens.LNAC01001112.1                             77363  7 -    347723 gt--ca-g-aa---------
i Ailurus_fulgens.LNAC01001112.1                         I 40 I 5
s Allactaga_bullata.AllBul_scaffold_9566                     71585  7 -     89534 gt--ta-g-aa---------
i Allactaga_bullata.AllBul_scaffold_9566                 I 33 I 21
s Allenopithecus_nigroviridis.k141_3361533                   11599 11 -     52922 gc--ca-g-aatg-----ga
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         11533 11 -     28001 gc--ca-g-aacg-----ga
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          1979 11 -     18505 gc--ca-g-aatg-----ga
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           2828 11 -     12518 gc--ca-g-aacg-----ga
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                               434 11 -     27731 gt--ca-g-aatg-----ga
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                 557 11 +      3134 gt--ca-g-aatg-----ga
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                                695 11 -     45847 gt--ca-g-aatg-----ga
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                21899 11 +     25266 gt--ca-g-aatg-----ga
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           1083 11 +      2906 gt--ca-g-aatg-----ga
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            15196 11 -     18578 gt--ca-g-aatg-----ga
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                               585 11 +     47717 gt--ca-g-aacg-----ga
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                              714 11 -      3544 gt--ca-g-aatg-----ga
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             11933 11 +     50774 gt--ca-g-aatg-----ga
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  12561 10 -     33861 gt--ca-g-aat------gg
i Aotus_azarae.k141_3104676                              C 0 I 1
s Aotus_griseimembra.k141_2240599                            12582 10 -     34016 gt--ca-g-aaa------gg
i Aotus_griseimembra.k141_2240599                        C 0 I 1
s Aotus_nancymaae.KZ198451.1                               4294977 10 -   5030052 GT--CA-G-AAT------GG
i Aotus_nancymaae.KZ198451.1                             C 0 I 1
s Aotus_trivirgatus.k141_2152450                             12583 10 -     34685 gt--ca-g-aat------gg
i Aotus_trivirgatus.k141_2152450                         C 0 I 1
s Aotus_vociferans.k141_344750                               25704 10 -     47192 gt--ca-g-aat------gg
i Aotus_vociferans.k141_344750                           C 0 I 1
s Aplodontia_rufa.AprRuf_scaffold_68852                       9256  7 +     20879 gt--ga-a-aa---------
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 35 C 0
s Arctocebus_calabarensis.k141_288239                        16817 11 +     17124 gt--ga-a-atta-----ga
i Arctocebus_calabarensis.k141_288239                    I 39 C 0
s Avahi_laniger.k141_765380                                  51280 11 -     92717 at--ca-g-aatt-----ga
i Avahi_laniger.k141_765380                              I 39 C 0
s Avahi_peyrierasi.k141_1424874                              51909 11 +     85213 at--ca-g-aatt-----ga
i Avahi_peyrierasi.k141_1424874                          I 39 C 0
s Callibella_humilis.k141_1278103                             2329 10 -     10423 GT--CA-G-AAT------GG
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             21821 10 +     31915 gt--ca-g-aat------gg
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            2299 10 +      5267 GT--CA-G-AAT------GG
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23587512 10 - 189096842 GT--CA-G-AAT------GG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              9043 10 -     12001 GT--CA-G-AAT------GG
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10000438  7 -  17673402 at--ca-g-aa---------
i Camelus_bactrianus.KN276810.1                          I 40 I 5
s Camelus_dromedarius.KN272107.1                           2332902  7 -   7040546 at--ca-g-aa---------
i Camelus_dromedarius.KN272107.1                         I 40 I 5
s Camelus_ferus.KB017975.1                                  401178  7 -   1652518 at--ca-g-aa---------
i Camelus_ferus.KB017975.1                               I 40 I 5
s CanFam4.chr16                                           17797325  7 -  60362399 gt--ca-g-aa---------
i CanFam4.chr16                                          I 40 I 5
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    183382  7 -    185531 gt--ca-g-aa---------
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 40 I 5
s Canis_lupus_dingo.QKWQ01000480.1                         9032768  7 -   9314153 gt--ca-g-aa---------
i Canis_lupus_dingo.QKWQ01000480.1                       I 40 I 5
s Canis_lupus_familiaris.chr16                            17957033  7 -  59632846 gt--ca-g-aa---------
i Canis_lupus_familiaris.chr16                           I 40 I 5
s Canis_lupus_orion.HG994398.1                            18498333  7 +  63665305 gt--ca-g-aa---------
i Canis_lupus_orion.HG994398.1                           I 40 I 5
s Carlito_syrichta.NW_007259797.1                           153597 11 -    496798 GT--CA-G-AACG-----GA
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    135690  7 +    179628 gt--ca-g-aa---------
i Castor_canadensis.CasCan_scaffold_2074                 I 36 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     90767  7 +    217609 at--ca-g-aa---------
i Catagonus_wagneri.CatWag_scaffold_2839                 I 40 I 5
s Cebuella_niveiventris.k141_1251222                          6953 10 -     11392 GT--CA-G-AAT------GG
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               3051 10 -      7577 GT--CA-G-AAT------GG
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         3096 11 +     31688 gt--cg-g-aatg-----ga
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12229444  7 +  27778364 gt--ca-g-aa---------
i Ceratotherium_simum.JH767749.1                         I 40 I 5
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634            471  7 -     25243 gt--ca-g-aa---------
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 40 I 5
s Cercocebus_atys.KQ010504.1                               4472558 11 +   4669795 GC--AA-G-AATG-----GA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        11105 11 -     19203 gc--ca-g-aatg-----ga
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           5527 11 +      8260 gc--ca-g-aatg-----ga
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           5754 11 +     27781 gc--ca-g-aatg-----ga
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         5910 11 -     20310 gc--ca-g-aatg-----ga
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           8894 11 +     29689 gc--ca-g-aatg-----ga
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            3322 11 +      9989 GC--CA-G-AATG-----GA
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          11571 11 -     27936 gc--ca-g-aatg-----ga
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                             443 11 -     17152 gc--ca-g-aatg-----ga
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38813976 11 +  39242232 gc--ca-g-aatg-----ga
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21219672 11 -  21565898 gc--ca-g-aatg-----ga
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       36791 11 -     53127 gc--ca-g-aatg-----ga
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        4077 11 +      7159 gc--ca-g-aatg-----ga
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       11594 11 -     27947 gc--ca-g-aatg-----ga
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         11567 11 +     17596 gc--ca-g-aatg-----ga
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                           792 11 +     26000 GC--CA-G-AATG-----GA
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             18707 11 -     52598 gt--ca-gaa-tt-----ga
i Cheirogaleus_major.k141_333249                         I 39 C 0
s Cheirogaleus_medius.k141_1055463                           14057  4 +     57038 gt--ca--------------
i Cheirogaleus_medius.k141_1055463                       I 39 I 2
s Chiropotes_albinasus.k141_2813271                           7965 11 +     11226 gt--ca-g-aatg-----ga
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18425532 11 -  18827391 gc--ca-g-aatg-----ga
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       11973 11 -     50209 gc--ca-g-aatg-----ga
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135418979 11 + 135778131 GC--CA-G-AATG-----GA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1907493 11 +   2368649 GC--CA-G-AATG-----GA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199947165 11 + 200372422 gc--ca-g-aatg-----ga
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              34037 11 +     84244 gc--ca-g-aatg-----ga
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          12017  7 -     20389 gt--ca-g-aa---------
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 40 I 5
s Cricetomys_gambianus.CriGam_scaffold_18520                 47673  7 +     63868 gt--ca-g-aa---------
i Cricetomys_gambianus.CriGam_scaffold_18520             I 90 C 0
s Cricetulus_griseus.LT883664.1                           11665011  7 + 224834208 gt--ca-g-aa---------
i Cricetulus_griseus.LT883664.1                          I 90 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             26500  6 -     87169 ga--ca-g-a----------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 40 I 5
s Ctenodactylus_gundi.CteGun_scaffold_65                    834768  7 +   1526836 ct--aa-t-aa---------
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 36 C 0
s Daubentonia_madagascariensis.ctg71                      12534884 11 -  12879189 gt--ca-a-aatt-----ga
i Daubentonia_madagascariensis.ctg71                     I 39 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  671296  7 +   1390856 gt--ca-g-aa---------
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 40 I 5
s Diceros_bicornis.DicBicMic_scaffold_5955                    4052  7 +    198055 gt--ca-g-aa---------
i Diceros_bicornis.DicBicMic_scaffold_5955               I 40 I 5
s Eidolon_helvum.KE759718.1                                   8538  7 +     11740 gt--ca-g-aa---------
i Eidolon_helvum.KE759718.1                              I 21 I 5
s Ellobius_lutescens.LOEQ01008920.1                          17199  7 -    110024 gt--ca-g-aa---------
i Ellobius_lutescens.LOEQ01008920.1                      I 90 C 0
s Ellobius_talpinus.LOJH01109367.1                            3253  7 -      6299 gt--ca-g-aa---------
i Ellobius_talpinus.LOJH01109367.1                       I 90 C 0
s Enhydra_lutris.KZ291758.1                               16327338  7 -  41312741 gt--ca-g-aa---------
i Enhydra_lutris.KZ291758.1                              I 40 I 6
s Equus_asinus.JREZ01000139.1                              1281350  7 +   4378816 gt--ca-g-ag---------
i Equus_asinus.JREZ01000139.1                            I 40 I 5
s Equus_caballus.CM000403.2                               18529171  7 -  39960074 gt--ca-g-ag---------
i Equus_caballus.CM000403.2                              I 41 I 5
s Equus_przewalskii.KK951119.1                               31186  7 +    498745 gt--ca-g-ag---------
i Equus_przewalskii.KK951119.1                           I 41 I 5
s Erythrocebus_patas.Contig38                             21202174 11 -  21539334 gc--ca-g-aatg-----ga
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              11389 11 -     14127 gt--ca-g-aatt-----gg
i Eulemur_albifrons.k141_342033                          I 39 C 0
s Eulemur_collaris.k141_377015                                4087 11 -     16928 gt--ca-g-aatt-----ga
i Eulemur_collaris.k141_377015                           I 39 C 0
s Eulemur_coronatus.k141_885031                              13120 11 -     25546 gt--ca-g-aatt-----ga
i Eulemur_coronatus.k141_885031                          I 39 C 0
s Eulemur_flavifrons.k141_1184614                            10305 11 +     26330 gt--ca-g-aatt-----ga
i Eulemur_flavifrons.k141_1184614                        I 39 C 0
s Eulemur_fulvus.k141_544389                                 11553 11 +     23973 gt--ca-g-aatt-----ga
i Eulemur_fulvus.k141_544389                             I 39 C 0
s Eulemur_macaco.k141_1562045                                10305 11 +     75513 gt--ca-g-aatt-----ga
i Eulemur_macaco.k141_1562045                            I 39 C 0
s Eulemur_mongoz.k141_232305                                  8256 11 +     97555 gt--ca-g-aatt-----ga
i Eulemur_mongoz.k141_232305                             I 39 C 0
s Eulemur_rubriventer.k141_571033                            11183 16 +     26496 gt--ca-g-aattgaattga
i Eulemur_rubriventer.k141_571033                        I 39 C 0
s Eulemur_rufus.k141_1476633                                  1789 11 -     17153 gt--ca-g-aatt-----ga
i Eulemur_rufus.k141_1476633                             I 39 C 0
s Eulemur_sanfordi.k141_1122526                              11365 11 +    111500 gt--ca-g-aatt-----ga
i Eulemur_sanfordi.k141_1122526                          I 39 C 0
s Felis_catus.CM001381.2                                  20235190  7 + 206538554 gt--ca-g-aa---------
i Felis_catus.CM001381.2                                 I 37 I 5
s Felis_catus_fca126.CM031415.1                           20194034  7 + 205367284 gt--ca-g-aa---------
i Felis_catus_fca126.CM031415.1                          I 37 I 5
s Felis_nigripes.FelNig_flattened_line_20823                  7546  7 -     36744 gt--ca-g-aa---------
i Felis_nigripes.FelNig_flattened_line_20823             I 37 I 5
s Galago_moholi.ctg2040                                     423616 11 -    453645 GT--CA-A-AATA-----GA
i Galago_moholi.ctg2040                                  I 24 C 0
s Galago_senegalensis.k141_631886                             1323 11 +     11339 GT--CA-A-AATA-----GA
i Galago_senegalensis.k141_631886                        I 24 C 0
s Galagoides_demidoff.k141_1959596                            5131 11 +      6795 gt--ca-a-aata-----ga
i Galagoides_demidoff.k141_1959596                       I 24 I 6
s Galeopterus_variegatus.GalVar_scaffold_266699               1849 11 +      2098 gt--ca-g-aatc-----aa
i Galeopterus_variegatus.GalVar_scaffold_266699          I 39 C 0
s Gorilla_beringei.k141_3596273                              12934 11 -     32273 gt--ca-g-aatg-----ga
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186335082 11 + 186649187 gt--ca-g-aatg-----ga
i Gorilla_gorilla.LT578341.1                             C 0 I 42
s Graphiurus_murinus.GraMur_scaffold_10447                   32123  7 +     78134 at--ca-a-aa---------
i Graphiurus_murinus.GraMur_scaffold_10447               I 34 C 0
s Hapalemur_alaotrensis.k141_1720546                         43268 11 +     55949 gt--ca-g-aatt-----aa
i Hapalemur_alaotrensis.k141_1720546                     I 40 n 40
s Hapalemur_gilberti.k141_488810                              9587 11 -     15286 at--ca-g-aatt-----ga
i Hapalemur_gilberti.k141_488810                         I 42 C 0
s Hapalemur_griseus.k141_1511508                             11225 11 +     18253 at--ca-g-aatt-----ga
i Hapalemur_griseus.k141_1511508                         I 42 C 0
s Hapalemur_meridionalis.k141_248335                         11328 11 -     41752 at--ca-g-aatt-----ga
i Hapalemur_meridionalis.k141_248335                     I 42 C 0
s Hapalemur_occidentalis.k141_380049                         32059 11 -     62596 gt--ca-g-aatt-----aa
i Hapalemur_occidentalis.k141_380049                     I 40 n 40
s Helogale_parvula.HelPar_flattened_line_2585               240336  7 +    327341 ga--ca-g-ag---------
i Helogale_parvula.HelPar_flattened_line_2585            I 40 I 5
s Hipposideros_armiger.JXIK01000431.1                       109833  7 +   1711038 at--cc-a-aa---------
i Hipposideros_armiger.JXIK01000431.1                    I 39 I 5
s Hipposideros_galeritus.HipGal_scaffold_29171               41255  7 +     43066 ct--cc-a-aa---------
i Hipposideros_galeritus.HipGal_scaffold_29171           I 39 I 5
s Hoolock_leuconedys.ctg274                                    431749 11 +    630532 gt--ca-g-gatg-----ga
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  42477  7 +     55795 gt--ca-g-aa---------
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 40 I 5
s Hylobates_agilis.k141_307679                               14683 11 -     15490 gt--ca-g-aatg-----ga
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              56689 11 +     67168 gt--ca-g-aatg-----ga
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189540339 11 - 191637585 gt--ca-g-aatg-----ga
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3333233 11 -  11177569 gt--ca-g-aatg-----ga
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7517308  7 -   7955117 gt--ca-g-aa---------
i Ictidomys_tridecemlineatus.JH393364.1                  I 36 C 0
s Indri_indri.k141_3655594                                   20137 11 +     31101 at--ca-g-aatt-----ga
i Indri_indri.k141_3655594                               I 39 C 0
s Jaculus_jaculus.JH725527.1                               8276222  7 -   9596543 AT--TC-G-AA---------
i Jaculus_jaculus.JH725527.1                             I 31 I 21
s Lemur_catta.scaffold_24                                 15521690 11 -  30322482 at--ca-g-aatt-----ga
i Lemur_catta.scaffold_24                                I 36 C 0
s Leontocebus_fuscicollis.k141_1820339                        4685 10 +     64341 gt--ca-g-aat------gg
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           1745 10 +      4941 gt--ca-g-aat------gg
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4613 10 +     35603 gt--ca-g-aat------gg
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    26090 10 +     38576 GT--CA-G-AAC------GG
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         22787 10 +     66356 GT--CA-G-AAT------GG
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          8573 11 -     23766 gt--ca-g-aatt-----ga
i Lepilemur_ankaranensis.k141_596936                     I 39 C 0
s Lepilemur_dorsalis.k141_577674                             26520 11 +     45836 gt--ca-g-aatt-----ga
i Lepilemur_dorsalis.k141_577674                         I 39 C 0
s Lepilemur_ruficaudatus.k141_320948                           743 11 -      1719 gt--ca-g-aatt-----ga
i Lepilemur_ruficaudatus.k141_320948                     I 39 C 0
s Lepilemur_septentrionalis.k141_185316                      24575 11 +     54090 gt--ca-g-aatt-----ga
i Lepilemur_septentrionalis.k141_185316                  I 39 C 0
s Leptonychotes_weddellii.KB714746.1                       3040476  7 +   3914936 gt--ca-g-aa---------
i Leptonychotes_weddellii.KB714746.1                     I 40 I 5
s Lophocebus_aterrimus.ctg367                              1434103 11 +   1826925 gc--ca-g-aatg-----ga
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            3077 11 +     11245 gt--ca-a-aata-----ga
i Loris_lydekkerianus.k141_2539221                       I 38 C 0
s Loris_tardigradus.ctg83                                  1001915 11 +   6120653 gt--ca-a-aata-----ga
i Loris_tardigradus.ctg83                                I 38 C 0
s Lycaon_pictus.CM007581.1                                17953273  7 -  59628241 gt--ca-g-aa---------
i Lycaon_pictus.CM007581.1                               I 40 I 5
s Macaca_arctoides.k141_2326796                               3924 11 +     40492 gc--ca-g-aatg-----ga
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59673178 11 +  60120075 gc--ca-g-aatg-----ga
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  9680 11 -     26193 gc--ca-g-aatg-----ga
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            77476 11 -    114318 gc--ca-g-aatg-----ga
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  3191 11 -     23192 gc--ca-g-aatg-----ga
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                12643 11 -     29190 gc--ca-g-aatg-----ga
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  21211 11 +     37952 gc--ca-g-aatg-----ga
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186836299 11 + 187317192 GC--CA-G-AATG-----GA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25454862 11 -  25927173 GC--CA-G-AATG-----GA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  77060 11 +     89720 gc--ca-g-aatg-----ga
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 4057 11 +     20474 gc--ca-g-aatg-----ga
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   3859 11 -     14993 gc--ca-g-aatg-----ga
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  326729 11 -    668171 gc--ca-g-aatg-----ga
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 2161 11 -     24072 gc--ca-g-aatg-----ga
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               22798 11 -     45290 gc--ca-g-aatg-----ga
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88614  7 +     94391 gt--ca-g-aa---------
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 21 I 5
s Mandrillus_leucophaeus.scaffold280                      23934377 11 -  24302211 gc--ca-g-aatg-----ga
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               348510 11 +    752769 gc--ca-g-aatg-----ga
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              17466  7 +    737560 tt--tg-g-aa---------
i Manis_javanica.JSZB01003497.1                          I 35 I 5
s Manis_pentadactyla.KN006162.1                              48851  7 -    317179 tt--ta-g-aa---------
i Manis_pentadactyla.KN006162.1                          I 35 I 5
s Marmota_marmota.CZRN01000018.1                          33099620  7 -  40650429 gt--ca-g-aa---------
i Marmota_marmota.CZRN01000018.1                         I 36 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         8368  7 -    207569 at--ca-g-aa---------
i Megaderma_lyra.MegLyr_scaffold_4542                    I 42 I 5
s Mellivora_capensis.MelCap_flattened_line_69365              8050  7 +     13704 gt--ca-g-aa---------
i Mellivora_capensis.MelCap_flattened_line_69365         I 40 I 6
s Meriones_unguiculatus.MerUng_scaffold_7390                 29599  7 +    140813 GT--CA-G-AA---------
i Meriones_unguiculatus.MerUng_scaffold_7390             I 104 C 0
s Mesocricetus_auratus.KB708134.1                         12180084  7 -  29670104 gt--ca-g-aa---------
i Mesocricetus_auratus.KB708134.1                        I 90 C 0
s Mico_argentatus.k141_1239457                                2875 10 -      7380 GT--CA-G-AAT------GG
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               1945 10 +     18990 GT--CA-G-AAT------GG
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      2880 10 -      7356 GT--CA-G-AAT------GG
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18289080 10 -  93316391 GT--CA-G-A-TT-----GA
i Microcebus_murinus.CM007674.1                          I 39 C 0
s Microtus_ochrogaster.CM001695.1                         11257709  7 -  27267610 gt--ca-g-aa---------
i Microtus_ochrogaster.CM001695.1                        I 90 C 0
s Miopithecus_ogouensis.k141_534055                           6100 11 -     28506 gc--ca-g-aatg-----ga
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         3315  7 -      8324 gt--ca-g-aa---------
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 42 I 5
s Mirza_zaza.k141_952172                                      6649 13 -     37649 gtgtca-g-aatt-----ga
i Mirza_zaza.k141_952172                                 I 39 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 139332  7 -    366855 gt--ca-g-aa---------
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 37 I 5
s Mungos_mungo.MunMun_flattened_line_23663                   33441  7 +     37127 ga--ca-g-aa---------
i Mungos_mungo.MunMun_flattened_line_23663               I 40 I 5
s Mus_caroli.LT608237.1                                   84358684  7 - 120012414 gt--ca-g-aa---------
i Mus_caroli.LT608237.1                                  I 94 C 0
s Mus_musculus.chr8                                       87647673  7 - 129401213 gt--ca-g-aa---------
i Mus_musculus.chr8                                      I 94 C 0
s Mus_pahari.LT608297.1                                   31351959  7 -  89631738 gt--ca-g-aa---------
i Mus_pahari.LT608297.1                                  I 95 C 0
s Mus_spretus.CM004101.1                                  90749751  7 - 130317789 gt--ca-g-aa---------
i Mus_spretus.CM004101.1                                 I 94 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              4399  7 +     14296 gt--gg-c-aa---------
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 29 C 0
s Mustela_putorius.JH418006.1                               299231  7 -  14710649 gt--ca-g-aa---------
i Mustela_putorius.JH418006.1                            I 40 I 6
s Nasalis_larvatus.k141_413338                               12095 11 +     21681 gc--ca-g-aatg-----ga
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    757919  7 +    783361 at--ca-g-aa---------
i Noctilio_leporinus.NocLep_scaffold_251                 I 35 I 5
s Nyctereutes_procyonoides.CAJHUB010000658.1               9147533  7 -   9404916 gt--ca-g-aa---------
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 40 I 5
s Nycticebus_bengalensis.LG01                            102576855 11 - 196305487 gt--ca-a-aata-----ga
i Nycticebus_bengalensis.LG01                            I 38 C 0
s Nycticebus_coucang.k141_5327727                             4541 11 +      8486 gt--ca-a-aata-----ga
i Nycticebus_coucang.k141_5327727                        I 38 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105747282 11 + 199412804 gt--ca-a-aata-----ga
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 38 C 0
s Ochotona_princeps.JH802162.1                             1360649  8 +   3988456 GT--CAAG-AA---------
i Ochotona_princeps.JH802162.1                           I 56 C 0
s Odobenus_rosmarus.KB229312.1                              504619  7 -   2017862 gt--ca-g-aa---------
i Odobenus_rosmarus.KB229312.1                           I 40 I 5
s Ondatra_zibethicus.OndZib_scaffold_46174                   21825  7 +     28053 gt--ca-g-aa---------
i Ondatra_zibethicus.OndZib_scaffold_46174               I 90 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    76901  7 +    102263 gt--ca-g-aa---------
i Onychomys_torridus.OnyTor_scaffold_2986                I 90 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       460288  7 -    559221 gt--ca-g-aa---------
i Otocyon_megalotis.JAEUCK010005147.1                    I 40 I 5
s Otolemur_crassicaudatus.k141_222918                         1158 11 +      8798 gt--ca-a-aatt-----ga
i Otolemur_crassicaudatus.k141_222918                    I 24 C 0
s Otolemur_garnettii.GL873799.1                             693325 11 -   1103335 gt--ca-a-aatt-----ga
i Otolemur_garnettii.GL873799.1                          I 24 C 0
s Pan_paniscus.KQ411613.1                                    41033 11 +     80009 GT--CA-G-AATG-----GA
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189139944 11 + 189151597 Gt--ca-g-aatg-----ga
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  149198  7 +    230217 gt--ca-g-aa---------
i Panthera_onca.PanOnc_flattened_line_3271               I 37 I 5
s Panthera_pardus.KV860321.1                                262405  7 +  18783137 gt--ca-g-aa---------
i Panthera_pardus.KV860321.1                             I 37 I 5
s Panthera_tigris.KE722367.1                               4719041  7 -   8748460 gt--ca-g-aa---------
i Panthera_tigris.KE722367.1                             I 37 I 5
s Papio_anubis.CM001495.2                                183440132 11 + 183742232 GC--CA-G-AATG-----GA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             3825 11 +     20448 gc--ca-g-aatg-----ga
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20560630 11 +  20919399 gc--ca-g-aatg-----ga
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   2568 11 +     41871 gc--ca-g-aatg-----ga
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     5854 11 +     27711 gc--ca-g-aatg-----ga
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  5933 11 +      9205 gc--ca-g-aatg-----ga
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10667  7 -     78924 gt--ca-g-aa---------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 40 I 5
s Perodicticus_ibeanus.k141_855320                            7050 11 +     13100 gt--ca-a-atta-----ga
i Perodicticus_ibeanus.k141_855320                       I 39 C 0
s Perodicticus_potto.k141_1092580                             5423 11 +     25941 gt--ca-a-atta-----ga
i Perodicticus_potto.k141_1092580                        I 39 C 0
s Peromyscus_maniculatus.KI615324.1                       18191500  7 -  18517816 gt--ca-g-aa---------
i Peromyscus_maniculatus.KI615324.1                      I 90 C 0
s Piliocolobus_badius.k141_1234363                           40609 11 +     62158 gc--ca-g-aatg-----ga
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        35331 11 +     89929 gc--ca-g-aatg-----ga
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            36747 11 +     51399 gc--ca-g-aatg-----ga
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14292985 11 -  14605196 GC--CA-G-AATG-----GA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189128058 11 + 189387572 Gt--ca-g-aatg-----ga
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9567666 11 +   9816681 gt--ca-g-aatg-----ga
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               70259 11 -     81375 gc--ca-g-aatg-----ga
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              2079 11 +     19060 gc--ca-g-aatg-----ga
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2594341 11 -   4620579 at--ca-g-aatt-----ga
i Prolemur_simus.MPIZ01000396.1                          I 42 C 0
s Propithecus_coquerelli.NW_012148875.1                     988334 11 +   2598838 at--ca-g-aatt-----ga
i Propithecus_coquerelli.NW_012148875.1                  I 39 C 0
s Propithecus_coronatus.k141_347390                          26644 11 +     38485 at--ca-g-aatt-----ga
i Propithecus_coronatus.k141_347390                      I 39 C 0
s Propithecus_diadema.k141_357118                             2805 11 +      4256 at--ca-g-aatt-----ga
i Propithecus_diadema.k141_357118                        I 39 C 0
s Propithecus_edwardsi.k141_1176054                          24165 11 +     35766 at--ca-g-aatt-----ga
i Propithecus_edwardsi.k141_1176054                      I 39 C 0
s Propithecus_perrieri.k141_1200571                           2347 11 -     24134 at--ca-g-aatt-----ga
i Propithecus_perrieri.k141_1200571                      I 39 C 0
s Propithecus_tattersalli.k141_790011                        26160 11 -     67325 at--ca-g-aatt-----ga
i Propithecus_tattersalli.k141_790011                    I 39 C 0
s Propithecus_verreauxi.k141_956661                           2397 11 -      6182 at--ca-g-aatt-----ga
i Propithecus_verreauxi.k141_956661                      I 39 C 0
s Psammomys_obesus.NESX01036370.1                             7241  7 -     21651 gt--ca-g-aa---------
i Psammomys_obesus.NESX01036370.1                        I 99 C 0
s Pteronotus_parnellii.KE909381.1                            12724  7 -     21811 gt--ca-g-aa---------
i Pteronotus_parnellii.KE909381.1                        I 36 I 5
s Pteronura_brasiliensis.PteBra_flattened_line_31117         38243  7 +     42204 gt--ca-g-aa---------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 40 I 6
s Pteropus_alecto.KB030862.1                              22974813  7 +  28871421 gt--ca-g-aa---------
i Pteropus_alecto.KB030862.1                             I 21 I 5
s Pteropus_vampyrus.KN525825.1                             1357902  7 +   4952924 gt--ca-g-aa---------
i Pteropus_vampyrus.KN525825.1                           I 20 I 5
s Puma_concolor.QAVW01001104.1                            20272320  7 -  38429054 gt--ca-g-aa---------
i Puma_concolor.QAVW01001104.1                           I 37 I 5
s Pygathrix_cinerea.k141_1153803                             12093 11 -     91421 gc--ca-g-aatg-----ga
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7606219 11 +   7812017 gc--ca-g-aatg-----ga
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             12067 11 -     72585 gc--ca-g-aatg-----ga
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53567755  7 +  90668790 gt--ca-g-aa---------
i Rattus_norvegicus.chr16                                I 83 C 0
s Rhinopithecus_bieti.k119_217274                             3774 11 -     11128 gc--ca-g-aatg-----ga
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91233129 11 - 195417433 GC--CA-G-AATG-----GA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7668778 11 +   7961872 gc--ca-g-aatg-----ga
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85806  7 -     96226 gt--ca-g-aa---------
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 21 I 5
s Saguinus_bicolor.k141_2619299                               4990 10 -      8359 gt--ca-g-gat------gg
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            11298 10 -     13588 gt--ca-g-aat------gg
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              4936 10 -      6207 gt--ca-g-aat------gg
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               10663 10 +     13640 gt--ca-a-aat------gg
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               5526 10 +      8564 gt--ca-g-aat------gg
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209465803 10 + 209938924 gt--ca-g-aat------gg
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 5017 10 -      9399 gt--ca-g-aat------gg
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 2163 10 +      3421 gt--ca-g-aat------gg
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119948344 11 - 121099817 GT--CA-G-AATA-----GA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       20811 11 +     46362 gt--ca-g-aata-----ga
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               20906 11 +     45824 gt--ca-g-aata-----ga
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             37521 11 -     64574 gt--ca-g-aata-----ga
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                                527 11 -     23631 gt--ca-g-aata-----ga
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 20799 11 -     61129 gt--ca-g-aata-----ga
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          16602 11 -     19888 gc--ca-g-aatg-----ga
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      23804 11 +     39453 gc--ca-g-aatg-----ga
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            4330 11 +     27826 gc--ca-g-aatg-----ga
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             3851 11 -     19483 gc--ca-g-aatg-----ga
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      3913 11 +      7198 gc--ca-g-aatg-----ga
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         12173 11 +     15514 gc--ca-g-aatg-----ga
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    10907  6 -     12148 -C--CA-G-AA---------
i Sigmodon_hispidus.SigHis_scaffold_60841                I 76 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               1845  7 +   1910179 gt--ca-c-aa---------
i Solenodon_paradoxus.SolPar_flattened_line_126          I 28 C 0
s Spermophilus_dauricus.KZ294078.1                         1950392  7 -   3870691 gt--ca-g-aa---------
i Spermophilus_dauricus.KZ294078.1                       I 36 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             28755  7 +     97271 gt--ca-g-ac---------
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 21 I 5
s Suricata_suricatta.SurSur_flattened_line_6629              16335  7 -    196729 ga--ca-g-aa---------
i Suricata_suricatta.SurSur_flattened_line_6629          I 40 I 5
s Sus_scrofa.JH118708.1                                      33264  7 -     47482 at--ca-g-aa---------
i Sus_scrofa.JH118708.1                                  I 41 I 5
s Symphalangus_syndactylus.tarseq_199                      1090381 11 -   1523678 ga--ca-g-aatg-----ga
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      116771  7 -    156842 at--ca-g-aa---------
i Tapirus_indicus.TapInd_scaffold_9301                   I 40 I 5
s Tapirus_terrestris.TapTer_scaffold_755                    385224  7 +    539355 at--ca-g-aa---------
i Tapirus_terrestris.TapTer_scaffold_755                 I 40 I 5
s Tarsius_lariang.k141_2201908                               23705 11 +     70052 gt--ca-g-aatg-----ga
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_2029956                               3050 11 +      4644 gt--ca-g-aatg-----ga
i Tarsius_wallacei.k141_2029956                          C 0 C 0
s Theropithecus_gelada.CM009954.1                        186425497 11 + 186847797 GC--CA-G-AATG-----GA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          7903 11 -     20410 gc--ca-g-aatg-----ga
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    12098 11 +     15221 gc--ca-g-aatg-----ga
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        8004 11 +     19930 gc--ca-g-aatg-----ga
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       4434 11 -     19997 gc--ca-g-aatg-----ga
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            44554 11 -     60166 gc--ca-g-aatg-----ga
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        12025 11 -     27529 gc--ca-g-aatg-----ga
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     11967 11 -     18194 gc--ca-g-aatg-----ga
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           5701 11 -     21137 gc--ca-g-aatg-----ga
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    4404 11 -     10723 gc--ca-g-aatg-----ga
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         3556 11 +      9834 gc--ca-g-aatg-----ga
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        21871 11 +     32220 gc--ca-g-aatg-----ga
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5935971 11 +   6242583 gc--ca-g-aatg-----ga
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        5219 11 +     20839 gc--ca-g-aatg-----ga
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2152458 11 +   4065304 gg--ct-g-aagt-----ga
i Tupaia_chinensis.KB320699.1                            I 20 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     5771 11 -     10553 gg--ct-g-aagt-----ga
i Tupaia_tana.TupTan_flattened_line_97126                I 20 C 0
s Ursus_maritimus.KK499267.1                               4848474  7 -   5085361 gt--ca-g-aa---------
i Ursus_maritimus.KK499267.1                             I 40 I 5
s Varecia_rubra.k141_590885                                   9024 11 +     50397 gt--ca-g-aatt-----ga
i Varecia_rubra.k141_590885                              I 41 C 0
s Varecia_variegata.k141_1128296                              9078 11 +     24756 gt--ca-g-aatt-----ga
i Varecia_variegata.k141_1128296                         I 41 C 0
s Vicugna_pacos.KN270157.1                                 5369938  7 -   5488506 at--ca-g-ag---------
i Vicugna_pacos.KN270157.1                               I 40 I 5
s Vulpes_lagopus.VulLag_flattened_line_30954                  8941  7 -     43706 gt--ca-g-aa---------
i Vulpes_lagopus.VulLag_flattened_line_30954             I 40 I 5
s Xerus_inauris.XerIna_scaffold_48378                        21769  7 -     24430 gt--ca-g-aa---------
i Xerus_inauris.XerIna_scaffold_48378                    I 36 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          3175  7 +     86975 gt--ca-g-aa---------
i Zalophus_californianus.ZalCal_flattened_line_17732     I 40 I 5
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519  0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188  0 +      1777 C
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383  9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   2809  0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 70244  0 +    116680 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                 8670 12 +     41958 I
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Oryctolagus_cuniculus.CM000791.1                        67144574 44 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186890  0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3730 44 -     14121 I
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            61949  0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Crocidura_indochinensis.CroInd_scaffold_287352              1624  0 +      4208 I
e Condylura_cristata.JH655891.1                           17547132  5 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            171068  0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15969  0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            5641  0 -      6351 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       3692 42 +     62944 ATCGAA----------T-C-----GTTGAAC-A--CTCAGT---T---GA---------------TGTTG--------G--------AGAA-T---T-G---GAGA
s Acinonyx_jubatus.LLWD01001279.1                           825336 30 -   1699592 -ttgaa----------t-t-----gttagac-t--ctctgt---t---gg---------------tgtca--------g---------------------------
i Acinonyx_jubatus.LLWD01001279.1                        I 5 I 11
s Acomys_cahirinus.AcoCah_scaffold_12655                     67979 41 +     87051 -ttgaa----------t-t-----gttgaat-a--cacgga---t---ga---------------tgg--------tgg--------agaa-c---g-a---taga
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9508588 32 -  29979442 -ttgaa----------t-t-----gttagac-acacacagt---t---gg---------------tgaca--------g---------------------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 5 I 11
s Ailurus_fulgens.LNAC01001112.1                             77375 31 -    347723 -ttaaa----------ttt-----gttagac-a--ctcagg---t---gg---------------tgtca--------c---------------------------
i Ailurus_fulgens.LNAC01001112.1                         I 5 I 12
s Allactaga_bullata.AllBul_scaffold_9566                     71613 17 -     89534 -----------------------------------------------------------------TGA--------TAG--------AGAA-T---T-G---AAGA
i Allactaga_bullata.AllBul_scaffold_9566                 I 21 C 0
s Allenopithecus_nigroviridis.k141_3361533                   11610 44 -     52922 attgaa----------t-tca---acagaac-a--ctcagt---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         11544 44 -     28001 attgaa----------t-tca---acagaac-a--ctcagt---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          1990 44 -     18505 attgaa----------t-tca---acagaac-a--ctcagt---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           2839 44 -     12518 attgaa----------t-tca---acagaac-c--ctcagt---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                               445 42 -     27731 attgaa----------c-t-----gttgaac-a--ctcagt---t---gg---------------tg---g-----tgg--------ggaa-t---t-g---gaga
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                 568 42 +      3134 attgaa----------c-t-----gttgaac-a--ctcagt---t---gg---------------tg---g-----tgg--------ggaa-t---t-g---gaga
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                                706 42 -     45847 attgaa----------c-t-----gttgaac-a--ctcagt---t---gg---------------tg---g-----tgg--------ggaa-c---t-g---gaga
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                21910 42 +     25266 attgaa----------c-t-----gttgaac-a--ctcagt---t---gg---------------tg---g-----tgg--------ggaa-t---t-g---gaga
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           1094 42 +      2906 attgaa----------c-t-----gttgaac-a--ctcagt---t---gg---------------tg---g-----tgg--------ggaa-t---t-g---gaga
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            15207 42 -     18578 attgaa----------c-t-----gttgaac-a--ctcagt---t---gg---------------tg---g-----tgg--------ggaa-t---t-g---gaga
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                               596 42 +     47717 attgaa----------c-t-----gttgaac-a--ctcagt---t---gt---------------tg---g-----tgg--------ggaa-t---t-g---gaga
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                              725 42 -      3544 attgaa----------c-t-----gttgaac-a--ctcagt---t---gg---------------tg---g-----tgg--------ggaa-t---t-g---gaga
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             11944 42 +     50774 attgaa----------c-t-----gttgaac-a--ctcagt---t---gg---------------tg---g-----tgg--------ggaa-t---t-g---gaga
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  12572 39 -     33861 attgaa----------t-t-----gttgaac-a--ctcagt---t---gg---------------tg-----------g--------ggaa-t---t-g---gaga
i Aotus_azarae.k141_3104676                              I 1 C 0
s Aotus_griseimembra.k141_2240599                            12593 39 -     34016 attgaa----------t-t-----gttgaac-a--ctcagt---t---gg---------------tg-----------g--------ggaa-t---t-g---gaga
i Aotus_griseimembra.k141_2240599                        I 1 C 0
s Aotus_nancymaae.KZ198451.1                               4294988 39 -   5030052 ATTGAA----------T-T-----GTTGAAC-A--CTCAGT---T---GG---------------TG-----------G--------AGAA-T---T-G---GAGA
i Aotus_nancymaae.KZ198451.1                             I 1 C 0
s Aotus_trivirgatus.k141_2152450                             12594 39 -     34685 attgaa----------t-t-----gttgaac-a--ctcagt---t---gg---------------tg-----------g--------ggaa-t---t-g---gaga
i Aotus_trivirgatus.k141_2152450                         I 1 C 0
s Aotus_vociferans.k141_344750                               25715 39 -     47192 attgaa----------t-t-----gttgaac-a--ctcagt---t---gg---------------tg-----------g--------ggaa-t---t-g---gaga
i Aotus_vociferans.k141_344750                           I 1 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       9263 42 +     20879 -acgaa----------t-t-----gctgaat-a--cccagc---t---gg---------------tgt-------c-ag--------agaaat---t-a---aaac
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_288239                        16828 37 +     17124 attaaa----------t-t-----gttgaac-a--c----T---T---Ga---------------gaaca--------a--------gtga-t---c-c---cat-
i Arctocebus_calabarensis.k141_288239                    C 0 N 0
s Avahi_laniger.k141_765380                                  51291 42 -     92717 accgaa----------t-t-----gttgaac-a--ctcaat---t---gg---------------tgtta--------a--------ggaa-t---t-g---caga
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              51920 42 +     85213 accgaa----------t-t-----gttgaac-a--ctcaat---t---gg---------------tgtta--------a--------ggaa-t---t-g---caga
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             2339 39 -     10423 AGTGAA----------T-T-----ATTGAAC-A--CTCAGT---T---GG---------------TG-----------G--------GGAA-T---T-G---GAGG
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             21831 42 +     31915 attgaa----------t-t-----gttgaac-a--cgcagt---tggtgg---------------tg-----------g--------ggaa-t---t-g---gaga
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            2309 39 +      5267 AGTGAA----------T-T-----ATTGAAC-A--CTCAGT---T---GG---------------TG-----------G--------GGAA-T---T-G---GAGG
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23587522 39 - 189096842 AGTGAA----------T-T-----ATTGAAC-A--CTCAGT---T---GG---------------TG-----------G--------GGAA-T---T-G---GAGG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              9053 39 -     12001 AGTGAA----------T-T-----ATTGAAC-A--CTCAGT---T---GG---------------TG-----------G--------GGAA-T---T-G---GAGG
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10000450 30 -  17673402 -tcaag----------t-t-----gttcgac-a--cccagt---t---gg---------------tatca--------g---------------------------
i Camelus_bactrianus.KN276810.1                          I 5 I 3
s Camelus_dromedarius.KN272107.1                           2332914 30 -   7040546 -tcaag----------t-t-----gttcgac-a--cccagt---t---gg---------------tatca--------g---------------------------
i Camelus_dromedarius.KN272107.1                         I 5 I 3
s Camelus_ferus.KB017975.1                                  401190 30 -   1652518 -tcaag----------t-t-----gttcgac-a--cccagt---t---gg---------------tatca--------g---------------------------
i Camelus_ferus.KB017975.1                               I 5 I 3
s CanFam4.chr16                                           17797337 25 -  60362399 ----------------t-t-----gttggat-a--ctcagt---t---gg---------------tatca--------g---------------------------
i CanFam4.chr16                                          I 5 I 11
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    183394 25 -    185531 ----------------t-t-----gttggat-a--ctcagt---t---gg---------------tatca--------g---------------------------
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 5 I 11
s Canis_lupus_dingo.QKWQ01000480.1                         9032780 25 -   9314153 ----------------t-t-----gttggat-a--ctcagt---t---gg---------------tatca--------g---------------------------
i Canis_lupus_dingo.QKWQ01000480.1                       I 5 I 11
s Canis_lupus_familiaris.chr16                            17957045 25 -  59632846 ----------------t-t-----gttggat-a--ctcagt---t---gg---------------tatca--------g---------------------------
i Canis_lupus_familiaris.chr16                           I 5 I 11
s Canis_lupus_orion.HG994398.1                            18498345 25 +  63665305 ----------------t-t-----gttggat-a--ctcagt---t---gg---------------tatca--------g---------------------------
i Canis_lupus_orion.HG994398.1                           I 5 I 11
s Carlito_syrichta.NW_007259797.1                           153608 42 -    496798 ATTGAA----------T-T-----GTTGAGC-A--CTCAGT---T---GG---------------TGTCA--------G--------AGAA-C---T-G---GAGA
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    135697 41 +    179628 -ctgaa----------t-t-----tttgaac-a--tccact---t---ag---------------tgt--g-g-----g--------agaa-t---t-A---AAGA
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     90779 30 +    217609 -ttgaa----------t-t-----gttcaac-a--cccagt---t---gg---------------tgtca--------g---------------------------
i Catagonus_wagneri.CatWag_scaffold_2839                 I 5 I 3
s Cebuella_niveiventris.k141_1251222                          6963 39 -     11392 AGTGAA----------T-T-----ATTAAAC-A--CTCAGT---T---GG---------------TG-----------G--------GGAA-T---T-G---GAGG
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               3061 39 -      7577 AGTGAA----------T-T-----ATTGAAC-A--CTCAGT---T---GG---------------TG-----------G--------GGAA-T---A-G---GAAG
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         3107 42 +     31688 attgaa----------t-t-----gttgagc-a--ctcagt---t---gg---------------tgtca--------g--------agaa-c---t-g---gaga
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12229456 30 +  27778364 -ttgaa----------t-t-----gttctac-a--cctagt---t---gg---------------tgtca--------g---------------------------
i Ceratotherium_simum.JH767749.1                         I 5 I 11
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634            483 30 -     25243 -ttgaa----------t-t-----gttctac-a--cctagt---t---gg---------------tgtca--------g---------------------------
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 5 I 11
s Cercocebus_atys.KQ010504.1                               4472569 44 +   4669795 ATTGAA----------T-T---CAACAGAAC-A--CTCAGT---T---GA---------------TGTTG--------G--------AGAA-C---T-G---GAGA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        11116 44 -     19203 attgaa----------t-tca---acagaac-a--ctcagt---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           5538 44 +      8260 attgaa----------t-tca---acagaac-a--ctcagt---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           5765 44 +     27781 attgaa----------t-tca---acagaac-a--ctcagt---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         5921 44 -     20310 attgaa----------t-tca---acagaac-a--ctcagt---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           8905 44 +     29689 attgaa----------t-tca---acagaac-a--ctcagt---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            3333 44 +      9989 ATTCAA----------T-T---CAACAGAAC-A--CTCAGT---T---GA---------------TGTTG--------G--------AGAA-C---T-G---GAGA
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          11582 44 -     27936 attgaa----------t-t---ccacagaac-a--ctcagt---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                             454 44 -     17152 attgaa----------t-tca---acagaac-a--ctcagt---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38813987 44 +  39242232 attcaa----------t-tca---acagaac-a--ctcagt---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21219683 44 -  21565898 attgaa----------t-tca---acagaac-a--ctcagt---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       36802 44 -     53127 attgaa----------t-tca---acagaac-a--ctcagt---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        4088 44 +      7159 atttaa----------t-tca---acagaac-a--ctcagt---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       11605 44 -     27947 attgaa----------t-tca---acagaac-a--ctcagt---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         11578 44 +     17596 attgaa----------t-tca---acagaac-a--ctcagt---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                           803 44 +     26000 ATTCAA----------T-T---CAACAGAAC-A--CTCAGT---T---GA---------------TGTTG--------G--------AGAA-C---T-G---GAGA
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             18718 42 -     52598 attgaa----------t-t-----gttgaac-a--ctcagt---t---gg---------------tgtca--------g--------ggaa-t---t-g---caga
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           14063 42 +     57038 attgaa----------t-t-----gttgaac-a--ctcaat---t---gg---------------tgtca--------g--------ggaa-t---t-g---caga
i Cheirogaleus_medius.k141_1055463                       I 2 C 0
s Chiropotes_albinasus.k141_2813271                           7976 44 +     11226 -ttgaa----------t-t-----gttgaac-a--ctcagttgct---gg---------------tg-----------g--------ggaa-ttgat-g---gaga
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18425543 44 -  18827391 attgaa----------t-tca---acagaac-a--ctcagt---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       11984 44 -     50209 attgaa----------t-tca---acagaac-a--ctcagt---t---ga---------------tgttg--------g--------aaaa-c---t-g---gaga
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135418990 44 + 135778131 ATTGAA----------T-T---CAACAGAAC-A--CTCAGT---T---GA---------------TGTTG--------G--------AGAA-C---T-G---GAGA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1907504 44 +   2368649 ATTGAA----------T-T---CAACAGAAC-A--CTCAGT---T---GA---------------TGTTG--------G--------GGAA-C---T-G---GAGA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199947176 44 + 200372422 attgaa----------t-tca---acagaac-a--ctcagt---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              34048 43 +     84244 attgaa----------t-tca---acagaac-a--ctcagt---t----a---------------tgttg--------g--------agaa-c---t-g---gaga
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          12029 41 -     20389 -ctaaa----------t-t-----attcaac-t--tccagt---t---gg---------------tgtca--------g--------agaa-c---tgg----aaa
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 5 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 47680 41 +     63868 -ttaaa----------t-t-----gttgagt-g--cacagc---t---ga---------------tga--------tgg--------agaa-t---t-A---TAGA
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11665018 41 + 224834208 -ttgaa----------t-t-----gttgaat-g--catagc---t---ga---------------taa--------tgg--------agag-t---a-a---aaca
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             26511 30 -     87169 -ttgaa----------t-t-----gttagac-a--ctctgc---t---ca---------------tgtca--------g---------------------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 5 I 11
s Ctenodactylus_gundi.CteGun_scaffold_65                    834775 39 +   1526836 -ttaaa----------t-t-----attgaaa-g--gcCAGT---A---GG---------------GAT----------G--------AGAA-T---T-T---AAAA
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12534895 42 -  12879189 atggaa----------t-t-----gttgtac-a--cccaat---t---gg---------------tatta--------g--------ggaa-t---t-g---gaga
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  671308 30 +   1390856 -ttgaa----------t-t-----gttctac-a--cctagt---t---gg---------------tgtca--------g---------------------------
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 5 I 11
s Diceros_bicornis.DicBicMic_scaffold_5955                    4064 30 +    198055 -ttgaa----------t-t-----gttctac-a--cctagt---t---gg---------------tgtca--------g---------------------------
i Diceros_bicornis.DicBicMic_scaffold_5955               I 5 I 11
s Eidolon_helvum.KE759718.1                                   8550 41 +     11740 -ctgaa----------t-t-----gttcaac-t--cccagg---t---gt---------------tgtca--------g--------agaa-c---tga----aga
i Eidolon_helvum.KE759718.1                              I 5 C 0
s Ellobius_lutescens.LOEQ01008920.1                          17206 41 -    110024 -ttcta----------t-t-----gttgaat-g--tacagc---t---ga---------------tga--------tgg--------aaaa-t---t-a---aaca
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01109367.1                            3260 41 -      6299 -tacta----------t-t-----gttgaat-g--tacagc---t---ga---------------tga--------tgg--------aaaa-t---t-a---aaca
i Ellobius_talpinus.LOJH01109367.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16327351 12 -  41312741 ------------------t-----gttagat-a--ctc--------------------------------------------------------------------
i Enhydra_lutris.KZ291758.1                              I 6 I 20
s Equus_asinus.JREZ01000139.1                              1281362 30 +   4378816 -ttgaa----------t-t-----gttcaac-a--tccagc---t---gg---------------tgtca--------g---------------------------
i Equus_asinus.JREZ01000139.1                            I 5 I 11
s Equus_caballus.CM000403.2                               18529183 30 -  39960074 -ttgaa----------a-t-----gttcaac-a--cccagc---t---gg---------------tgtca--------g---------------------------
i Equus_caballus.CM000403.2                              I 5 I 11
s Equus_przewalskii.KK951119.1                               31198 30 +    498745 -ttgaa----------a-t-----gttcaac-a--cccagc---t---gg---------------tgtca--------g---------------------------
i Equus_przewalskii.KK951119.1                           I 5 I 11
s Erythrocebus_patas.Contig38                             21202185 44 -  21539334 attgaa----------t-tca---acagaac-a--ctcagt---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              11400 42 -     14127 attgaa----------t-t-----gttgaac-a--cgcaat---t---gg---------------tgtta--------g--------ggaa-t---t-g---caga
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                4098 42 -     16928 attgaa----------t-t-----gttgaac-a--cgcaat---t---gg---------------tgtta--------g--------ggaa-t---t-g---caga
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              13131 42 -     25546 attgaa----------t-t-----gttgaac-a--cgcaat---t---gg---------------tgtta--------g--------ggaa-t---t-g---caga
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            10316 47 +     26330 attgaa----------t-tgaattgttgaac-a--cacaat---t---gg---------------tgtta--------g--------ggaa-t---t-g---caga
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 11564 42 +     23973 attgaa----------t-t-----gttgaac-a--cgcaat---t---gg---------------tgtta--------g--------ggaa-t---t-g---caga
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                10316 47 +     75513 attgaa----------t-tgaattgttgaac-a--cataat---t---tg---------------tgtta--------g--------ggaa-t---t-g---caga
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  8267 42 +     97555 attgaa----------t-t-----gttgaac-a--cgcaat---t---gg---------------tgtta--------g--------ggaa-t---t-g---caga
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            11199 42 +     26496 attgaa----------t-t-----gttgaac-a--cgcaat---t---gg---------------tgtta--------c--------ggaa-t---t-g---caga
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  1800 42 -     17153 attgaa----------t-t-----gttgaac-a--cgcaat---t---gg---------------tgtta--------g--------ggaa-t---t-g---caga
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              11376 42 +    111500 attgaa----------t-t-----gttgaac-a--tgcaat---t---gg---------------tgtta--------g--------ggaa-t---t-g---caga
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20235202 30 + 206538554 -ttgaa----------t-t-----gttagac-t--ctctgt---t---gg---------------tgtca--------g---------------------------
i Felis_catus.CM001381.2                                 I 5 I 11
s Felis_catus_fca126.CM031415.1                           20194046 30 + 205367284 -ttgaa----------t-t-----gttagac-t--ctctgt---t---gg---------------tgtca--------g---------------------------
i Felis_catus_fca126.CM031415.1                          I 5 I 11
s Felis_nigripes.FelNig_flattened_line_20823                  7558 30 -     36744 -ttgaa----------t-t-----gttagac-t--ctctgt---t---gg---------------tgtca--------g---------------------------
i Felis_nigripes.FelNig_flattened_line_20823             I 5 I 11
s Galago_moholi.ctg2040                                     423627 42 -    453645 ATTAAA----------T-T-----GTTGAAC-A--CTCAAT---T---GG---------------TGGGA--------A--------GGGA-C---T-G---GAGA
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             1334 42 +     11339 ATTAAA----------T-T-----GTTGAAC-A--CTCAAT---T---GG---------------TGGGA--------A--------GGGA-C---T-G---GAGA
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1959596                            5148 35 +      6795 ------------------t-----gttgaac-a--ctcaat---t---gg---------------tggga--------g--------ggga-c---t-g---gaga
i Galagoides_demidoff.k141_1959596                       I 6 C 0
s Galeopterus_variegatus.GalVar_scaffold_266699               1860 37 +      2098 attgag----------t-t-----gttgaac-a--cccagt---t---gg---------------tactg--------g--------agaa-t---t---------
i Galeopterus_variegatus.GalVar_scaffold_266699          C 0 I 2
s Gorilla_beringei.k141_3596273                              12945 42 -     32273 atcgaa----------t-c-----gttgaac-a--ctcagt---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.CYUI03001814.1                             29456 42 -     31004 attgaa----------t-c-----gttgaac-a--ctcagt---t---ga---------------tgttg--------g--------agaa-t---t-g---gaga
i Gorilla_gorilla.CYUI03001814.1                         I 17 I 290
s Graphiurus_murinus.GraMur_scaffold_10447                   32130 41 +     78134 -ttaaa----------t-t-----gttgaaa-g--cccagt---t---gg---------------tgt--------tag--------agaa-t---t-a---aaga
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           4453 38 -     19426 ----aa----------t-t-----gttaaac-a--cacaat---t---gg---------------tgtta--------g--------ggaa-t---t-g---caga
i Hapalemur_alaotrensis.k141_170648                      I 52 C 0
s Hapalemur_gilberti.k141_488810                              9598 42 -     15286 attgaa----------t-t-----gttaaac-a--cgcaat---t---gg---------------tgtta--------g--------ggaa-t---t-g---caga
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             11236 42 +     18253 attgaa----------t-t-----gttaaac-a--cacaat---t---gg---------------tgtta--------g--------ggaa-t---t-g---caga
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         11339 42 -     41752 attgaa----------t-t-----gttaaac-a--cgcaat---t---gg---------------tgtta--------g--------ggaa-t---t-g---caga
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         11176 42 -     16460 attgaa----------t-t-----gttaaac-a--cacaat---t---gg---------------tgtta--------g--------ggaa-t---t-g---caga
i Hapalemur_occidentalis.k141_907772                     I 53 C 0
s Helogale_parvula.HelPar_flattened_line_2585               240348 44 +    327341 -tggaa----------c-t-----gttag-c-a--ctctgt---t---gagagaactgttCTCTGTTCCA--------G---------------------------
i Helogale_parvula.HelPar_flattened_line_2585            I 5 I 11
s Hipposideros_armiger.JXIK01000431.1                       109845 41 +   1711038 -ctgaa----------t-t-----tttcaac-t--ctgggt---t---gg---------------tgtca--------g--------agaa-c---tgg----aga
i Hipposideros_armiger.JXIK01000431.1                    I 5 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               41267 41 +     43066 -ctgaa----------t-t-----gttcgac-t--ctgggt---t---gg---------------tgtca--------g--------agaa-c---tgg----aga
i Hipposideros_galeritus.HipGal_scaffold_29171           I 5 C 0
s Hoolock_leuconedys.ctg274                                    431760 42 +    630532 attgaa----------t-t-----gttgaac-a--ctcagt---t---ga---------------tgttg--------g--------agaa-t---t-g---gaga
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  42489 30 +     55795 -ttgaa----------t-t-----gttagat-a--ctccgt---t---gg---------------tgtca--------g---------------------------
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 5 I 11
s Hylobates_agilis.k141_307679                               14694 42 -     15490 attgaa----------t-t-----gttgaac-a--ctcagt---t---ga---------------tgttg--------g--------agaa-t---t-g---gaga
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              56700 42 +     67168 attgaa----------t-t-----gttgaac-a--ctcagt---t---ga---------------tgttg--------g--------agaa-t---t-g---gaga
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189540350 42 - 191637585 attgaa----------t-t-----attgaac-a--ctcagt---t---ga---------------tgttg--------g--------agaa-t---t-g---gaga
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3333244 42 -  11177569 attgaa----------t-t-----attgaac-a--ctcagt---t---ga---------------tgttg--------g--------agaa-t---t-g---gaga
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7517315 41 -   7955117 -atgaa----------t-t-----gttggat-a--ttcagt---t---gg---------------tat-------c-ag--------agaa-t---t-a---gaga
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   20148 42 +     31101 attgaa----------t-c-----gctgagc-a--ctcaat---t---gg---------------tgtta--------g--------ggaa-t---c-g---caga
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8276250 17 -   9596543 -----------------------------------------------------------------TGA--------TGG--------AGAA-A---T-G---TAGA
i Jaculus_jaculus.JH725527.1                             I 21 C 0
s Lemur_catta.scaffold_24                                 15521701 42 -  30322482 attgaa----------t-t-----gttaaac-a--cacaat---t---gg---------------tgtta--------g--------ggaa-t---t-g---caga
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        4695 42 +     64341 attgaa----------t-t-----gttgaag-a--ctcagt---tggtgg---------------tg-----------g--------ggaa-t---t-g---gaga
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           1755 42 +      4941 attgaa----------t-t-----gttgaac-a--ctcagt---tggtgg---------------tg-----------g--------ggaa-t---t-g---gaga
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4623 42 +     35603 attgaa----------t-t-----gttgaac-a--ctcagt---tggtgg---------------tg-----------g--------ggaa-t---t-g---gaga
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    26100 19 +     38576 AGTGAA----------T-T-----GTTGAAC-A--CTC--------------------------------------------------------------------
i Leontopithecus_chrysomelas.k141_1519602                C 0 I 19
s Leontopithecus_rosalia.k141_464620                         22797 19 +     66356 AGTGAA----------T-T-----GTTGAAC-A--CTC--------------------------------------------------------------------
i Leontopithecus_rosalia.k141_464620                     C 0 I 19
s Lepilemur_ankaranensis.k141_596936                          8584 41 -     23766 atcgaa----------t-t-----gttgaac-a--ctcaat---t----g---------------tgtta--------g--------ggaa-t---t-g---caga
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             26531 41 +     45836 atcgaa----------t-t-----gttgaac-a--ctcaat---t----g---------------tgtta--------g--------ggaa-t---t-g---caga
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_320948                           754 41 -      1719 tttcaa----------t-t-----gttgaac-a--ctcaat---t----g---------------tgtta--------g--------agaa-t---t-g---caga
i Lepilemur_ruficaudatus.k141_320948                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      24586 41 +     54090 atcgaa----------t-t-----gttgaac-a--ctcaat---t----g---------------tgtta--------g--------ggaa-t---t-g---caga
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3040488 21 +   3914936 -ctgaa----------t-t-----gttagac-a--ctcagt-----------------------------------------------------------------
i Leptonychotes_weddellii.KB714746.1                     I 5 I 19
s Lophocebus_aterrimus.ctg367                              1434114 44 +   1826925 attgaa----------t-tca---acagaac-a--ctccgt---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            3088 46 +     11245 attaaa----------t-t-----gttgaac-a--ttcagt---t---gg---------------GGGGG--------G-GGGT---GTGA-C---T-A---GATA
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1001926 46 +   6120653 attaaa----------t-t-----gttgaac-a--ttcagt---t---gg---------------GGGGG--------G---GT-GTGTGA-C---T-A---GATA
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17953285 25 -  59628241 ----------------t-t-----gttggat-a--ctcagt---t---gg---------------tatca--------g---------------------------
i Lycaon_pictus.CM007581.1                               I 5 I 11
s Macaca_arctoides.k141_2326796                               3935 35 +     40492 attgaa----------t-tca---acagaac-a--ctcagt---t---ga---------------tgttg--------g--------ag-----------------
i Macaca_arctoides.k141_2326796                          C 0 I 1
s Macaca_assamensis.Contig5                               59673189 43 +  60120075 attgaa----------t-tca---acagaac-a--ctcagt---t---ga---------------tgttggagaactgg--------ag-----------------
i Macaca_assamensis.Contig5                              C 0 I 1
s Macaca_cyclopis.k119_18836                                  9691 31 -     26193 attgaa----------t-tca---acagaac-a--ctcagt---t---ga---------------tgtt-------------------------------------
i Macaca_cyclopis.k119_18836                             C 0 I 5
s Macaca_fascicularis.k141_814140                            77487 44 -    114318 attgaa----------t-tca---acagaac-a--ctcagt---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  3202 31 -     23192 attgaa----------t-tca---acagaac-a--ctcagt---t---ga---------------tgtt-------------------------------------
i Macaca_fuscata.k119_255327                             C 0 I 5
s Macaca_leonina.k141_3550399                                12654 31 -     29190 attgaa----------t-tca---acagaac-a--ctcagt---t---ga---------------tgtt-------------------------------------
i Macaca_leonina.k141_3550399                            C 0 I 5
s Macaca_maura.k141_2733130                                  21222 31 +     37952 attgaa----------t-tca---acagaac-a--ctcagt---t---ga---------------tgtt-------------------------------------
i Macaca_maura.k141_2733130                              C 0 I 5
s Macaca_mulatta.NC_041758.1                             186836310 31 + 187317192 ATTGAA----------T-T---CAACAGGAC-A--CTCAGT---T---GA---------------TGTT-------------------------------------
i Macaca_mulatta.NC_041758.1                             C 0 I 5
s Macaca_nemestrina.KQ007038.1                            25454873 31 -  25927173 ATTGAA----------T-T---CAACAGAAC-A--CTCAGT---T---GA---------------TGTT-------------------------------------
i Macaca_nemestrina.KQ007038.1                           C 0 I 5
s Macaca_nigra.k141_1655396                                  77071 31 +     89720 attgaa----------t-tca---acagaac-a--ctcagt---t---ga---------------tgtt-------------------------------------
i Macaca_nigra.k141_1655396                              C 0 I 5
s Macaca_radiata.k141_3680011                                 4068 35 +     20474 attgaa----------t-tca---acagaac-a--ctcagt---t---ga---------------tgttg--------g--------ag-----------------
i Macaca_radiata.k141_3680011                            C 0 I 1
s Macaca_siberu.k141_635500                                   3870 31 -     14993 attgaa----------t-tca---acagaac-a--ctcagt---t---ga---------------tgtt-------------------------------------
i Macaca_siberu.k141_635500                              C 0 I 5
s Macaca_silenus.Contig273                                  326740 31 -    668171 attgaa----------t-tca---acagaac-a--ctcagt---t---ga---------------tgtt-------------------------------------
i Macaca_silenus.Contig273                               C 0 I 5
s Macaca_thibetana.k99_256239                                 2172 43 -     24072 attgaa----------t-tca---acagaac-a--ctcagt---t---ga---------------tgttggagaactgg--------ag-----------------
i Macaca_thibetana.k99_256239                            C 0 I 1
s Macaca_tonkeana.k141_1498238                               22809 31 -     45290 attgaa----------t-tca---acagaac-a--ctcagt---t---ga---------------tgtt-------------------------------------
i Macaca_tonkeana.k141_1498238                           C 0 I 5
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88626 41 +     94391 -ctgaa----------t-t-----gttcaac-t--cccagg---t---gt---------------tgtca--------g--------agaa-c---tgg----aga
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 5 C 0
s Mandrillus_leucophaeus.scaffold280                      23934388 44 -  24302211 attgaa----------t-tca---acagaac-a--ctcagt---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               348521 44 +    752769 attgaa----------t-tca---acagaac-a--ctcagt---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              17478 30 +    737560 -ctgaa----------t-t-----gtcagac-a--cctagc---t---gg---------------tgtca--------g---------------------------
i Manis_javanica.JSZB01003497.1                          I 5 I 11
s Manis_pentadactyla.KN006162.1                              48863 30 -    317179 -ctgaa----------t-t-----gtcagac-a--cctagc---t---gg---------------tgtca--------g---------------------------
i Manis_pentadactyla.KN006162.1                          I 5 I 11
s Marmota_marmota.CZRN01000018.1                          33099627 41 -  40650429 -atgaa----------t-t-----gctggat-a--ttcagt---t---gg---------------tat-------c-ag--------agaa-t---t-a---gaga
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         8380 41 -    207569 -ctgaa----------t-t-----gttggac-c--cccagt---g---gg---------------tctta--------g--------agaa-c---ggg----aga
i Megaderma_lyra.MegLyr_scaffold_4542                    I 5 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              8063 24 +     13704 ------------------t-----gttagat-a--ctcagt---t---gg---------------tgtca--------c---------------------------
i Mellivora_capensis.MelCap_flattened_line_69365         I 6 I 12
s Meriones_unguiculatus.MerUng_scaffold_7390                 29606 41 +    140813 -TTGAA----------C-C-----GCTGAAT-G--CACAGC---T---GA---------------TGA--------TAG--------AAAA-T---T-A---AAGA
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12180091 13 -  29670104 -ttgaa----------t-t-----gTTGAA----------------------------------------------------------------------------
i Mesocricetus_auratus.KB708134.1                        C 0 I 14
s Mico_argentatus.k141_1239457                                2885 39 -      7380 AGTGAA----------T-T-----ATTGAAC-A--CTCAGT---T---GG---------------TG-----------G--------GGAA-T---T-G---GAGG
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               1955 19 +     18990 AGTGAA----------T-T-----ATTGAAC-A--CTC--------------------------------------------------------------------
i Mico_humeralifer.k141_1976199                          C 0 I 16
s Mico_schneideri.k141_1950671                                      2890 39 -      7356 AGTGAA----------T-T-----ATTGAAC-A--CTCAGT---T---GG---------------TG-----------G--------GGAA-T---T-G---GAGG
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18289090 42 -  93316391 ATTGAA----------G-T-----GTCGAAC-A--CTCAAT---T---GG---------------TGTCA--------G--------GGAA-T---T-G---CAGA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11257716 41 -  27267610 -ttcta----------t-t-----gttgaat-g--tacagc---t---ga---------------tga--------tgg--------agaa-t---t-a---aaca
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miopithecus_ogouensis.k141_534055                           6111 44 -     28506 attcaa----------t-tca---acagaac-a--ctcagt---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         3327 21 -      8324 -ctgaa----------t-t-----gttagac-a--ctcagt-----------------------------------------------------------------
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 5 I 19
s Mirza_zaza.k141_952172                                      6662 42 -     37649 attgaa----------t-t-----gttgaac-a--ttcaat---t---gg---------------tatca--------g--------ggaa-t---t-g---caga
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 139344 32 -    366855 -ttgaa----------t-t-----tttcgac-a--cccagt---t---gg---------------tatca--------g--------ag-----------------
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 5 I 1
s Mungos_mungo.MunMun_flattened_line_23663                   33453 45 +     37127 -tggaa----------t-t-----gttagac-a--ctctgt---c---gagagaactgttctccgttcca--------g---------------------------
i Mungos_mungo.MunMun_flattened_line_23663               I 5 I 11
s Mus_caroli.LT608237.1                                   84358691 41 - 120012414 -ctgaa----------t-t-----gttgaat-g--cacttt---t---aa---------------agg--------tgg--------tgaa-t---t-a---aaga
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87647680 41 - 129401213 -ctgaa----------t-t-----gttgaat-g--cacttt---t---aa---------------tgg--------tgg--------tgaa-t---t-a---aaga
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31351966 41 -  89631738 -ctgaa----------t-t-----attgaat-g--catagt---c---aa---------------tgg--------tgg--------tgaa-t---t-a---aaga
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90749758 41 - 130317789 -ctgaa----------t-t-----gTTGAAT-G--CACTTT---T---AA---------------TGG--------TGG--------TGaa-t---a-a---aaga
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              4406 41 +     14296 -ttgaa----------t-t-----gttgaaa-a--cccagt---t---gg---------------tgt--------tag--------agaa-t---t-t---aaaa
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               299244 24 -  14710649 ------------------t-----gttagat-a--ctcagt---t---gg---------------tgtca--------g---------------------------
i Mustela_putorius.JH418006.1                            I 6 I 12
s Nasalis_larvatus.k141_413338                               12106 43 +     21681 attgaa----------t-tca---acagaac-a--ctca-t---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    757931 32 +    783361 -gtaaa----------t-t-----gttctat-a--cccagc---t---gg---------------cgcca--------g--------ag-----------------
i Noctilio_leporinus.NocLep_scaffold_251                 I 5 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9147545 25 -   9404916 ----------------t-t-----gttggat-a--ctcagt---t---gg---------------tatca--------g---------------------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 5 I 11
s Nycticebus_bengalensis.LG01                            102576866 42 - 196305487 attaaa----------t-t-----gttgaac-a--ttcagt---t---gg---------------gggga--------g--------gtga-c---t-g---gata
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             4552 42 +      8486 attaaa----------t-t-----gttgaac-a--ttcagt---t---gg---------------gggga--------g--------gtga-c---t-g---gata
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105747293 42 + 199412804 attaaa----------t-t-----gttgaac-a--ttcagt---t---gg---------------gtgga--------g--------gtga-c---t-g---gata
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1360657 51 +   3988456 -AAGAACTGAATTAAAT-T-----ATCAAAT-G--CCCAGT---T---GC---------------TGT--------TGC--------AGAG-T---A-G---Caga
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              504631 21 -   2017862 -ctgaa----------t-t-----gttagac-a--ctcagt-----------------------------------------------------------------
i Odobenus_rosmarus.KB229312.1                           I 5 I 19
s Ondatra_zibethicus.OndZib_scaffold_46174                   21832 41 +     28053 -ttgta----------t-t-----gttgaat-g--tacagc---t---ga---------------tga--------tgg--------agaa-t---t-a---aaca
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    76908 41 +    102263 -ttgaa----------c-t-----gttgaat-g--cacagc---t---ga---------------tga--------tgg--------agaa-t---t-C---AACA
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       460300 25 -    559221 ----------------t-t-----gttggat-a--ctcagt---t---gg---------------tatca--------g---------------------------
i Otocyon_megalotis.JAEUCK010005147.1                    I 5 I 11
s Otolemur_crassicaudatus.k141_222918                         1169 42 +      8798 attaaa----------t-c-----gttgaac-a--ctcaat---t---gg---------------tggga--------g--------ggga-c---t-g---gaga
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             693336 42 -   1103335 attaaa----------t-t-----gttGAAC-A--CTCAAT---T---GG---------------TGGGA--------G--------GGGA-C---T-G---GAGA
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    41044 42 +     80009 ATCGAA----------T-C-----GTTGAAC-A--CTCAGT---T---GA---------------TGTTG--------G--------AGAA-T---T-G---GAGA
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189139955 42 + 189151597 atcgaa----------t-c-----gttGAAC-A--CTCAGT---T---GA---------------TGTTG--------G--------AGAA-T---T-G---GAGA
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  149210 30 +    230217 -ttgaa----------t-t-----gttagac-t--ctctgt---t---gg---------------tgtca--------g---------------------------
i Panthera_onca.PanOnc_flattened_line_3271               I 5 I 11
s Panthera_pardus.KV860321.1                                262417 30 +  18783137 -ttgaa----------t-t-----gttagac-t--ctctgt---t---gg---------------tgtca--------g---------------------------
i Panthera_pardus.KV860321.1                             I 5 I 11
s Panthera_tigris.KE722367.1                               4719053 30 -   8748460 -ttgaa----------t-t-----gttagac-t--ctctgt---t---gg---------------tgtca--------g---------------------------
i Panthera_tigris.KE722367.1                             I 5 I 11
s Papio_anubis.CM001495.2                                183440143 44 + 183742232 ATTGAA----------T-T---CAACAGAAC-A--CTCCGT---T---GA---------------TGTTG--------G--------AGAA-C---T-G---GAGA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             3836 44 +     20448 attgaa----------t-tca---acagaac-a--ctccgt---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20560641 44 +  20919399 attgaa----------t-tca---acagaac-a--ctccgt---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   2579 44 +     41871 attgaa----------t-tca---acagaac-a--ctccgt---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     5865 44 +     27711 attgaa----------t-tca---acagaac-a--ctccgt---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  5944 44 +      9205 attgaa----------t-tca---acagaac-a--ctccgt---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10679 30 -     78924 -ttgaa----------t-t-----gttagac-a--ctctgt---t---gg---------------tgtca--------g---------------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 5 I 11
s Perodicticus_ibeanus.k141_855320                            7061 37 +     13100 attaaa----------t-t-----gttgaac-a--c----t---c---Ga---------------gaaca--------a--------gtga-t---c-g---cat-
i Perodicticus_ibeanus.k141_855320                       C 0 I 109
s Perodicticus_potto.k141_1092580                             5434 37 +     25941 attaaa----------t-t-----gttgaac-a--c----t---c---ga---------------gaaca--------a--------gtga-t---c-g---cat-
i Perodicticus_potto.k141_1092580                        C 0 I 109
s Peromyscus_maniculatus.KI615324.1                       18191507 41 -  18517816 -ttgaa----------c-t-----gttgaat-g--cacggc---t---gg---------------tga--------tgg--------agaa-t---t-C---AACA
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Piliocolobus_badius.k141_1234363                           40620 44 +     62158 attgaa----------t-tca---acagaac-a--ctcagt---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        35342 44 +     89929 attgaa----------t-tca---acagaac-a--ctcagt---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            36758 44 +     51399 attgaa----------t-tca---acagaac-a--ctcagt---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14292996 44 -  14605196 ATTGAA----------T-T---CAACAGAAC-A--CTCAGT---T---GA---------------TGTTG--------G--------AGAA-C---T-G---GAGA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189128069 42 + 189387572 atcaaa----------t-t-----gttGAAC-A--CTCAGT---T---GA---------------TGTTG--------G--------AGAA-T---T-G---GAGA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9567677 42 +   9816681 atcaaa----------t-t-----gttgaac-a--ctcagt---t---ga---------------tgttg--------g--------agaa-t---t-g---gaga
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               70270 43 -     81375 attgaa----------t-tca---acagaac-a--ctca-t---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              2090 43 +     19060 attgaa----------t-tca---acagaac-a--ctca-t---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2594352 42 -   4620579 attgaa----------t-t-----gttaaAC-A--CGCAAT---T---GG---------------TATTA--------G--------GGAA-T---T-G---CAGA
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     988345 42 +   2598838 attgaa----------t-t-----gttgaAC-A--CTCAAT---T---GG---------------TGTTA--------A--------GGAA-T---T-G---CAGA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          26655 42 +     38485 attgaa----------t-t-----gttgaac-a--ctcaat---t---gg---------------tgtta--------a--------ggaa-t---t-g---caga
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             2816 42 +      4256 attgaa----------t-t-----gttgaac-a--ctcaat---t---gg---------------tgtta--------a--------ggaa-c---t-g---caga
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          24176 42 +     35766 attgaa----------t-t-----gttgaac-a--ctcaat---t---gg---------------tgtta--------a--------ggaa-c---t-g---caga
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           2358 42 -     24134 attgaa----------t-t-----gttgaac-a--ctcaat---t---gg---------------tgtta--------a--------ggaa-t---t-g---caga
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        26171 42 -     67325 attgaa----------t-t-----gttgaac-a--ctcaat---t---gg---------------tgtta--------a--------ggaa-t---t-g---caga
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           2408 42 -      6182 attgaa----------t-t-----gttgaac-a--ctcaat---t---gg---------------tgtta--------a--------ggaa-t---t-g---caga
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             7248 41 -     21651 -ttgaa----------c-c-----gctgaat-g--cacaac---t---ga---------------tga--------tgg--------agaa-t---t-A---AAGA
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            12736 32 -     21811 -ctgaa----------t-t-----gtccgac-t--cccagt---t---gg---------------AACCA--------G--------TG-----------------
i Pteronotus_parnellii.KE909381.1                        I 5 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_31117         38256 24 +     42204 ------------------t-----attagat-a--ctcagt---t---ag---------------tgtca--------c---------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 6 I 12
s Pteropus_alecto.KB030862.1                              22974825 41 +  28871421 -ctgaa----------t-t-----gtttaac-t--cccagg---t---gt---------------tgtca--------g--------aaaa-c---tgg----aga
i Pteropus_alecto.KB030862.1                             I 5 C 0
s Pteropus_vampyrus.KN525825.1                             1357914 41 +   4952924 -ctgaa----------t-t-----gttcaac-t--cccagg---t---gt---------------tgtca--------g--------agaa-c---tgg----aga
i Pteropus_vampyrus.KN525825.1                           I 5 C 0
s Puma_concolor.QAVW01001104.1                            20272332 30 -  38429054 -ttgaa----------t-t-----gttagac-t--ctctgt---t---gg---------------tgtca--------g---------------------------
i Puma_concolor.QAVW01001104.1                           I 5 I 11
s Pygathrix_cinerea.k141_1153803                             12104 43 -     91421 attgaa----------t-tca---acagaac-a--ctca-t---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7606230 43 +   7812017 attgaa----------t-tca---acagaac-a--ctca-t---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             12078 43 -     72585 attgaa----------t-tca---acagaac-a--ctca-t---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53567762 41 +  90668790 -ctgaa----------t-c-----attgaat-g--cacagc---t---aa---------------tga--------tgg--------tgaa-t---t-a---aaga
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             3785 43 -     11128 attgaa----------t-tca---acagaac-a--ctca-t---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91233140 43 - 195417433 ATTGAA----------T-T---CAACAGAAC-A--CTCA-T---T---GA---------------TGTTG--------G--------AGAA-C---T-G---GAGG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7668789 43 +   7961872 attgaa----------t-tca---acagaac-a--ctca-t---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85818 41 -     96226 -ctgaa----------t-t-----gttcaac-t--cccagg---t---gt---------------tgtca--------g--------agaa-c---tgg----aga
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 5 C 0
s Saguinus_bicolor.k141_2619299                               5000 45 -      8359 attgaa----------t-t-----gttgaac-a--ctcagt---tgctgg---------------tg-----------g--------ggaa-t---t-gatggaga
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            11308 45 -     13588 attgaa----------t-t-----gttgaac-a--ctcagt---tggtgg---------------tg-----------g--------ggaa-c---t-gatggaga
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              4946 45 -      6207 attgaa----------t-t-----gttgaac-a--ctcagt---tggtgg---------------tg-----------g--------ggaa-t---t-gatggaga
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               10673 45 +     13640 attgaa----------t-t-----gttgaac-a--ctcagt---tggtgg---------------tg-----------g--------ggaa-t---t-gatggaga
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               5536 45 +      8564 attgaa----------t-t-----gttgaac-a--ctcagt---tggtgg---------------tg-----------g--------ggaa-t---t-gatggaga
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209465813 45 + 209938924 attgaa----------t-t-----gttgaac-a--ctcagt---tggtgg---------------tg-----------g--------ggaa-t---t-gatggaga
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 5027 45 -      9399 attgaa----------t-t-----gttgaac-a--ctcagt---tggtgg---------------tg-----------g--------ggaa-t---t-gatggaga
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 2173 45 +      3421 attgaa----------t-t-----gttgaac-a--ctcagt---tggtgg---------------tg-----------g--------ggaa-c---t-gatggaga
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119948355 42 - 121099817 ATTGAA----------T-T-----GTTGAAC-G--CTCAGTTGGT---GG---------------TG-----------G--------GGAA-C---T-G---GAGA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       20822 42 +     46362 attgaa----------t-t-----gttgaac-g--ctcagttggt---gg---------------tg-----------g--------ggaa-t---t-g---gaga
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               20917 42 +     45824 attgaa----------t-t-----gttgaac-g--ctcagttggt---gg---------------tg-----------g--------ggaa-t---t-g---gaga
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             37532 42 -     64574 attgaa----------t-t-----gttgaac-g--ctcagttggt---gg---------------tg-----------g--------ggaa-c---t-g---gaga
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                                538 42 -     23631 attgaa----------t-t-----gttgaac-g--ctcagttggt---gg---------------tg-----------g--------ggaa-c---t-g---gaga
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 20810 42 -     61129 attgaa----------t-t-----gttgaac-g--ctcagttggt---gg---------------tg-----------g--------ggaa-t---t-g---gaga
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          16613 43 -     19888 attgaa----------t-tca---acagaac-a--ctca-t---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      23815 43 +     39453 attgaa----------t-tca---acagaac-a--ctca-t---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            4341 43 +     27826 attgaa----------t-tca---acagaac-a--ctca-t---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             3862 43 -     19483 attgaa----------t-tca---acagaac-a--ctca-t---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      3924 43 +      7198 attgaa----------t-tca---acagaac-a--ctca-t---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         12184 43 +     15514 attgaa----------t-tca---acagaac-a--ctca-t---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    10913 27 -     12148 -TTAAA----------T-T-----GTTGAAT-G--CACAGC---A---GA---------------TGA--------------------------------------
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 I 13
s Solenodon_paradoxus.SolPar_flattened_line_126               1852 40 +   1910179 -ttgaa----------t-c-----gTTAGACCA--TCCAGT---T---GG---------------TATCA--------GTAAATTG-AG-----------------
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 1
s Spermophilus_dauricus.KZ294078.1                         1950399 41 -   3870691 -atgaa----------t-t-----gctggat-a--ttcagt---t---gg---------------tat-------c-ag--------agaa-t---t-a---gaga
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             28767 30 +     97271 -ttgaa----------t-t-----tttagac-a--ctcaat---t---gg---------------tgtca--------c---------------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 5 I 12
s Suricata_suricatta.SurSur_flattened_line_6629              16347 45 -    196729 -tggaa----------t-t-----gttagac-a--ctcTGT---C---GAGAGAACTGTTCTCTGTTCCA--------G---------------------------
i Suricata_suricatta.SurSur_flattened_line_6629          I 5 I 11
s Sus_scrofa.JH118708.1                                      33276 30 -     47482 -ttgaa----------t-t-----gttcaac-c--ccccgt---t---gg---------------tgtca--------g---------------------------
i Sus_scrofa.JH118708.1                                  I 5 I 3
s Symphalangus_syndactylus.tarseq_199                      1090392 42 -   1523678 attgaa----------t-t-----gttgaac-a--ctcagt---t---ga---------------tgttg--------g--------agaa-t---t-g---gaga
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 8682 30 +     41958 -ATGAA----------C-T-----GTTCAAC-G--CCCAGT---T---GG---------------TGTCA--------G---------------------------
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 12 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      116783 30 -    156842 -ttgaa----------t-t-----gttcgac-a--cccagt---t---gg---------------tgtca--------g---------------------------
i Tapirus_indicus.TapInd_scaffold_9301                   I 5 I 11
s Tapirus_terrestris.TapTer_scaffold_755                    385236 30 +    539355 -ttgaa----------t-t-----gttcaac-a--cccagt---t---gg---------------tgtca--------g---------------------------
i Tapirus_terrestris.TapTer_scaffold_755                 I 5 I 11
s Tarsius_lariang.k141_2201908                               23716 42 +     70052 atggaa----------t-t-----gttgagc-a--ctcagt---t---gg---------------tgtca--------g--------agaa-t---t-g---gaga
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_2029956                               3061 42 +      4644 atggaa----------t-t-----gttgagc-a--ctcagt---t---gg---------------tgtca--------g--------agaa-t---t-g---gaga
i Tarsius_wallacei.k141_2029956                          C 0 C 0
s Theropithecus_gelada.CM009954.1                        186425508 44 + 186847797 ATTGAA----------T-T---CAACAGAAC-A--CTCCGT---T---GA---------------TGTTG--------G--------AGAA-C---T-G---GAGA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          7914 43 -     20410 attgaa----------t-tca---acagaac-a--ctca-t---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    12109 43 +     15221 attgaa----------t-tca---acagaac-a--ctca-t---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        8015 43 +     19930 attgaa----------t-tca---acagaac-a--ctca-t---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       4445 43 -     19997 attgaa----------t-tca---acagaac-a--ctca-t---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            44565 43 -     60166 attgaa----------t-tca---acagaac-a--ctca-t---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        12036 43 -     27529 attgaa----------t-tca---acagaac-a--ctca-t---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     11978 43 -     18194 attgaa----------t-tca---acagaac-a--ctca-t---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           5712 43 -     21137 attgaa----------t-tca---acagaac-a--ctca-t---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    4415 43 -     10723 attgaa----------t-tca---acagaac-a--ctca-t---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         3567 43 +      9834 attgaa----------t-tca---acagaac-a--ctca-t---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        21882 43 +     32220 attgaa----------t-tca---acagaac-a--ctca-t---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5935982 43 +   6242583 attgaa----------t-tca---acagaac-a--ctca-t---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        5230 43 +     20839 attgaa----------t-tca---acagaac-a--ctca-t---t---ga---------------tgttg--------g--------agaa-c---t-g---gaga
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2152469 39 +   4065304 actgaa----------c-t-----g--gaac-a--tccagt---t---gg---------------tgtct--------a--------agaa-c---t-g----aga
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     5782 39 -     10553 cctgaa----------t-t-----g--gaac-a--tccagt---t---gg---------------tgtcT--------A--------AGAA-A---T-G----AGA
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4848486 30 -   5085361 -ttgaa----------t-t-----gttagac-a--cacagt---t---gg---------------tgtca--------g---------------------------
i Ursus_maritimus.KK499267.1                             I 5 I 11
s Varecia_rubra.k141_590885                                   9035 42 +     50397 actgaa----------t-t-----gttgaac-a--tgcaat---t---gg---------------tgtta--------g--------ggaa-t---t-g---caga
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              9089 42 +     24756 actgaa----------t-t-----gttgaac-a--tgcaat---t---gg---------------tgtta--------g--------ggaa-t---t-g---caga
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5369950 30 -   5488506 -tcaag----------t-t-----gttcgac-a--cccagt---t---gg---------------tatca--------g---------------------------
i Vicugna_pacos.KN270157.1                               I 5 I 3
s Vulpes_lagopus.VulLag_flattened_line_30954                  8953 25 -     43706 ----------------t-t-----gttggat-a--ctcagt---t---gg---------------tatca--------g---------------------------
i Vulpes_lagopus.VulLag_flattened_line_30954             I 5 I 11
s Xerus_inauris.XerIna_scaffold_48378                        21776 39 -     24430 -atgaa----------t-t-----gctgggc-a--ctgagt---t---gg---------------cat----------g--------agaa-t---t-c---gaga
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          3187 21 +     86975 -ctgaa----------t-t-----gttagac-a--ctcagt-----------------------------------------------------------------
i Zalophus_californianus.ZalCal_flattened_line_17732     I 5 I 19
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519  0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188  0 +      1777 C
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383  9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   2809  0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 70244  0 +    116680 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Oryctolagus_cuniculus.CM000791.1                        67144574 44 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186890  0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3730 44 -     14121 I
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            61949  0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Crocidura_indochinensis.CroInd_scaffold_287352              1624  0 +      4208 I
e Condylura_cristata.JH655891.1                           17547132  5 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            171068  0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15969  0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            5641  0 -      6351 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       3734  4 +     62944 A--------TCC
s Acinonyx_jubatus.LLWD01001279.1                           825377  4 -   1699592 a--------ttg
i Acinonyx_jubatus.LLWD01001279.1                        I 11 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     68020  4 +     87051 a--------ttt
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9508631  4 -  29979442 a--------ctg
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 11 C 0
s Ailurus_fulgens.LNAC01001112.1                             77418  4 -    347723 a--------ttg
i Ailurus_fulgens.LNAC01001112.1                         I 12 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     71630  4 -     89534 A--------TTC
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   11654  4 -     52922 a--------tcc
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         11588  4 -     28001 a--------tcc
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          2034  4 -     18505 a--------tcc
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           2883  4 -     12518 a--------tcc
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                               487  4 -     27731 a--------tca
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                 610  4 +      3134 a--------tca
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                                748  4 -     45847 a--------tca
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                21952  4 +     25266 a--------tca
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           1136  4 +      2906 a--------tca
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            15249  4 -     18578 a--------tca
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                               638  4 +     47717 a--------tca
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                              767  4 -      3544 a--------tca
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             11986  4 +     50774 a--------tca
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  12611  4 -     33861 a--------tca
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            12632  4 -     34016 a--------tca
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4295027  4 -   5030052 A--------TCA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             12633  4 -     34685 a--------tca
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               25754  4 -     47192 a--------tca
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       9305  1 +     20879 -----------a
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                        7989  4 +     14667 a--------tca
i Arctocebus_calabarensis.k141_2318572                   N 0 C 0
s Avahi_laniger.k141_765380                                  51333  4 -     92717 a--------tta
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              51962  4 +     85213 a--------tta
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             2378  4 -     10423 A--------TCG
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             21873  4 +     31915 a--------tca
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            2348  4 +      5267 A--------TCG
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23587561  4 - 189096842 A--------TCG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              9092  4 -     12001 A--------TCG
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10000483  4 -  17673402 t--------ttg
i Camelus_bactrianus.KN276810.1                          I 3 C 0
s Camelus_dromedarius.KN272107.1                           2332947  4 -   7040546 t--------ttg
i Camelus_dromedarius.KN272107.1                         I 3 C 0
s Camelus_ferus.KB017975.1                                  401223  4 -   1652518 t--------ttg
i Camelus_ferus.KB017975.1                               I 3 C 0
s CanFam4.chr16                                           17797373  4 -  60362399 a--------ttg
i CanFam4.chr16                                          I 11 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    183430  4 -    185531 a--------ttg
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 11 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9032816  4 -   9314153 a--------ttg
i Canis_lupus_dingo.QKWQ01000480.1                       I 11 C 0
s Canis_lupus_familiaris.chr16                            17957081  4 -  59632846 a--------ttg
i Canis_lupus_familiaris.chr16                           I 11 C 0
s Canis_lupus_orion.HG994398.1                            18498381  4 +  63665305 a--------ttg
i Canis_lupus_orion.HG994398.1                           I 11 I 38
s Carlito_syrichta.NW_007259797.1                           153650  3 -    496798 A-------TT--
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    135738  4 +    179628 A--------TTT
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     90812 12 +    217609 actggagaactg
i Catagonus_wagneri.CatWag_scaffold_2839                 I 3 C 0
s Cebuella_niveiventris.k141_1251222                          7002  4 -     11392 A--------TCG
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               3100  4 -      7577 A--------TCG
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         3149  3 +     31688 a-t------t--
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12229497  4 +  27778364 a--------ttg
i Ceratotherium_simum.JH767749.1                         I 11 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634            524  4 -     25243 a--------ttg
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 11 C 0
s Cercocebus_atys.KQ010504.1                               4472613  4 +   4669795 A--------TCC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        11160  4 -     19203 a--------tcc
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           5582  4 +      8260 a--------tcc
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           5809  4 +     27781 a--------tcc
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         5965  4 -     20310 a--------tcc
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           8949  4 +     29689 a--------tcc
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            3377  4 +      9989 A--------TCC
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          11626  4 -     27936 a--------tcc
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                             498  4 -     17152 a--------tcc
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38814031  4 +  39242232 a--------tcc
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21219727  4 -  21565898 a--------tcc
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       36846  4 -     53127 a--------tcc
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        4132  4 +      7159 a--------tcc
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       11649  4 -     27947 a--------tcc
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         11622  4 +     17596 a--------tcc
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                           847  4 +     26000 A--------TCC
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             18760  4 -     52598 a--------ttc
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           14105  4 +     57038 a--------ttc
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           8020  4 +     11226 a--------tga
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18425587  4 -  18827391 a--------tcc
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       12028  4 -     50209 a--------tCC
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135419034  4 + 135778131 A--------TCC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1907548  4 +   2368649 A--------TCC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199947220  4 + 200372422 a--------tcc
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              34091  4 +     84244 a--------tcc
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          12070  4 -     20389 a--------ctg
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 47721  4 +     63868 A--------TTC
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11665059  4 + 224834208 a--------ttc
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             26552  4 -     87169 a--------ttt
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 11 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    834814  4 +   1526836 G--------TTT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12534937  4 -  12879189 a--------tta
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  671349  4 +   1390856 a--------ttg
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 11 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    4105  4 +    198055 a--------ttg
i Diceros_bicornis.DicBicMic_scaffold_5955               I 11 C 0
s Eidolon_helvum.KE759718.1                                   8591  4 +     11740 a--------ttg
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          17247  4 -    110024 c--------ttc
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01109367.1                            3301  4 -      6299 c--------ttc
i Ellobius_talpinus.LOJH01109367.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16327383  4 -  41312741 a--------ttg
i Enhydra_lutris.KZ291758.1                              I 20 C 0
s Equus_asinus.JREZ01000139.1                              1281403  4 +   4378816 a--------ttg
i Equus_asinus.JREZ01000139.1                            I 11 C 0
s Equus_caballus.CM000403.2                               18529224  4 -  39960074 a--------ttg
i Equus_caballus.CM000403.2                              I 11 C 0
s Equus_przewalskii.KK951119.1                               31239  4 +    498745 a--------ttg
i Equus_przewalskii.KK951119.1                           I 11 C 0
s Erythrocebus_patas.Contig38                             21202229  4 -  21539334 a--------tcc
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              11442  4 -     14127 a--------tta
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                4140  4 -     16928 a--------tta
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              13173  4 -     25546 a--------tta
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            10363  4 +     26330 a--------tta
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 11606  4 +     23973 a--------tta
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                10363  4 +     75513 a--------tta
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  8309  4 +     97555 a--------tta
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            11241  4 +     26496 a--------tta
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  1842  4 -     17153 a--------tta
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              11418  4 +    111500 a--------tta
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20235243  4 + 206538554 a--------ttg
i Felis_catus.CM001381.2                                 I 11 C 0
s Felis_catus_fca126.CM031415.1                           20194087  4 + 205367284 a--------ttg
i Felis_catus_fca126.CM031415.1                          I 11 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  7599  4 -     36744 a--------ttg
i Felis_nigripes.FelNig_flattened_line_20823             I 11 C 0
s Galago_moholi.ctg2040                                     423669  4 -    453645 A--------TTA
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             1376  4 +     11339 A--------TTA
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1959596                            5183  4 +      6795 a--------tta
i Galagoides_demidoff.k141_1959596                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_266699               1899  4 +      2098 t--------tta
i Galeopterus_variegatus.GalVar_scaffold_266699          I 2 C 0
s Gorilla_beringei.k141_3596273                              12987  4 -     32273 a--------tcc
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186335135  4 + 186649187 a--------tcc
i Gorilla_gorilla.LT578341.1                             I 42 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   32171  4 +     78134 a--------ttc
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           4491  4 -     19426 a--------tta
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              9640  4 -     15286 a--------tta
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             11278  4 +     18253 a--------tta
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         11381  4 -     41752 a--------tta
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         11218  4 -     16460 a--------tta
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               240403  4 +    327341 A--------TTG
i Helogale_parvula.HelPar_flattened_line_2585            I 11 C 0
s Hipposideros_armiger.JXIK01000431.1                       109886  4 +   1711038 a--------ctg
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               41308  4 +     43066 a--------ctg
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    431802  4 +    630532 a--------tcc
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  42530  4 +     55795 a--------ttg
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 11 C 0
s Hylobates_agilis.k141_307679                               14736  4 -     15490 a--------tcc
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              56742  4 +     67168 a--------tcc
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189540392  4 - 191637585 a--------ttc
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3333286  4 -  11177569 a--------ttc
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7517356  4 -   7955117 a--------ttc
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   20190  4 +     31101 a--------tta
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8276267  4 -   9596543 A--------TTC
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lemur_catta.scaffold_24                                 15521743  4 -  30322482 a--------tta
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        4737  4 +     64341 a--------tca
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           1797  4 +      4941 a--------tca
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4665  4 +     35603 a--------tca
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    26138  4 +     38576 A--------TCA
i Leontopithecus_chrysomelas.k141_1519602                I 19 C 0
s Leontopithecus_rosalia.k141_464620                         22835  4 +     66356 A--------TCA
i Leontopithecus_rosalia.k141_464620                     I 19 C 0
s Lepilemur_ankaranensis.k141_596936                          8625  4 -     23766 a--------tta
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             26572  4 +     45836 a--------tta
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_320948                           795  4 -      1719 a--------tta
i Lepilemur_ruficaudatus.k141_320948                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      24627  4 +     54090 a--------tta
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3040528  4 +   3914936 a--------ttg
i Leptonychotes_weddellii.KB714746.1                     I 19 C 0
s Lophocebus_aterrimus.ctg367                              1434158  4 +   1826925 a--------tcc
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            3134  4 +     11245 A--------TTA
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1001972  4 +   6120653 A--------TTA
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17953321  4 -  59628241 a--------ttg
i Lycaon_pictus.CM007581.1                               I 11 C 0
s Macaca_arctoides.k141_2326796                               3971  4 +     40492 a--------tcc
i Macaca_arctoides.k141_2326796                          I 1 C 0
s Macaca_assamensis.Contig5                               59673233  4 +  60120075 a--------tcc
i Macaca_assamensis.Contig5                              I 1 C 0
s Macaca_cyclopis.k119_18836                                  9727  4 -     26193 a--------tcc
i Macaca_cyclopis.k119_18836                             I 5 C 0
s Macaca_fascicularis.k141_814140                            77531  4 -    114318 a--------tcc
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  3238  4 -     23192 a--------tcc
i Macaca_fuscata.k119_255327                             I 5 C 0
s Macaca_leonina.k141_3550399                                12690  4 -     29190 a--------tcc
i Macaca_leonina.k141_3550399                            I 5 C 0
s Macaca_maura.k141_2733130                                  21258  4 +     37952 a--------tcc
i Macaca_maura.k141_2733130                              I 5 C 0
s Macaca_mulatta.NC_041758.1                             186836346  4 + 187317192 A--------TCC
i Macaca_mulatta.NC_041758.1                             I 5 C 0
s Macaca_nemestrina.KQ007038.1                            25454909  4 -  25927173 A--------TCC
i Macaca_nemestrina.KQ007038.1                           I 5 C 0
s Macaca_nigra.k141_1655396                                  77107  4 +     89720 a--------tcc
i Macaca_nigra.k141_1655396                              I 5 C 0
s Macaca_radiata.k141_3680011                                 4104  4 +     20474 a--------tcc
i Macaca_radiata.k141_3680011                            I 1 C 0
s Macaca_siberu.k141_635500                                   3906  4 -     14993 a--------tcc
i Macaca_siberu.k141_635500                              I 5 C 0
s Macaca_silenus.Contig273                                  326776  4 -    668171 a--------tcc
i Macaca_silenus.Contig273                               I 5 C 0
s Macaca_thibetana.k99_256239                                 2216  4 -     24072 a--------tcc
i Macaca_thibetana.k99_256239                            I 1 C 0
s Macaca_tonkeana.k141_1498238                               22845  4 -     45290 a--------tcc
i Macaca_tonkeana.k141_1498238                           I 5 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88667  4 +     94391 a--------ttg
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23934432  4 -  24302211 a--------tcc
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               348565  4 +    752769 a--------tcc
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              17519  4 +    737560 a--------cta
i Manis_javanica.JSZB01003497.1                          I 11 C 0
s Manis_pentadactyla.KN006162.1                              48904  4 -    317179 a--------cta
i Manis_pentadactyla.KN006162.1                          I 11 C 0
s Marmota_marmota.CZRN01000018.1                          33099668  4 -  40650429 a--------ttc
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         8421  4 -    207569 a--------ctg
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              8099  4 +     13704 a--------ctg
i Mellivora_capensis.MelCap_flattened_line_69365         I 12 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 29647  4 +    140813 A--------TTT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12180118  4 -  29670104 A--------TTC
i Mesocricetus_auratus.KB708134.1                        I 14 C 0
s Mico_argentatus.k141_1239457                                2924  4 -      7380 A--------TCG
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               1990  4 +     18990 A--------TCG
i Mico_humeralifer.k141_1976199                          I 16 C 0
s Mico_schneideri.k141_1950671                                      2929  4 -      7356 A--------TCG
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18289132  4 -  93316391 A--------TTA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11257757  4 -  27267610 c--------ttc
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miopithecus_ogouensis.k141_534055                           6155  4 -     28506 a--------tcc
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         3367  4 -      8324 a--------ttg
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 19 C 0
s Mirza_zaza.k141_952172                                      6704  4 -     37649 a--------tta
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 139377  4 -    366855 a--------ttg
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 1 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   33509  4 +     37127 a--------ttg
i Mungos_mungo.MunMun_flattened_line_23663               I 11 C 0
s Mus_caroli.LT608237.1                                   84358732  4 - 120012414 a--------ttt
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87647721  4 - 129401213 a--------ttt
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31352007  4 -  89631738 a--------ttt
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90749799  4 - 130317789 a--------ttt
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              4447  4 +     14296 t--------ttc
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               299280  4 -  14710649 a--------ttg
i Mustela_putorius.JH418006.1                            I 12 C 0
s Nasalis_larvatus.k141_413338                               12149  4 +     21681 a--------tcc
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9147581  4 -   9404916 a--------ctg
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 11 C 0
s Nycticebus_bengalensis.LG01                            102576908  4 - 196305487 a--------tta
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             4594  4 +      8486 a--------tta
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105747335  4 + 199412804 a--------tta
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1360708  4 +   3988456 a--------ttc
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              504671  4 -   2017862 a--------ttg
i Odobenus_rosmarus.KB229312.1                           I 19 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   21873  4 +     28053 c--------ttc
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    76949  4 +    102263 A--------TTC
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       460336  4 -    559221 a--------ttg
i Otocyon_megalotis.JAEUCK010005147.1                    I 11 C 0
s Otolemur_crassicaudatus.k141_222918                         1211  4 +      8798 a--------tta
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             693378  4 -   1103335 A--------TTA
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    41086  4 +     80009 A--------TCC
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189139997  4 + 189151597 A--------TCC
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  149251  4 +    230217 a--------ttg
i Panthera_onca.PanOnc_flattened_line_3271               I 11 C 0
s Panthera_pardus.KV860321.1                                262458  4 +  18783137 a--------ttg
i Panthera_pardus.KV860321.1                             I 11 C 0
s Panthera_tigris.KE722367.1                               4719094  4 -   8748460 a--------ttg
i Panthera_tigris.KE722367.1                             I 11 C 0
s Papio_anubis.CM001495.2                                183440187  4 + 183742232 A--------TCC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             3880  4 +     20448 a--------tcc
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20560685  4 +  20919399 a--------tcc
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   2623  4 +     41871 a--------tcc
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     5909  4 +     27711 a--------tcc
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  5988  4 +      9205 a--------tcc
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10720  4 -     78924 a--------ttg
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 11 C 0
s Perodicticus_ibeanus.k141_855320                            7207  4 +     13100 a--------tca
i Perodicticus_ibeanus.k141_855320                       I 109 C 0
s Perodicticus_potto.k141_1092580                             5580  4 +     25941 a--------tca
i Perodicticus_potto.k141_1092580                        I 109 C 0
s Peromyscus_maniculatus.KI615324.1                       18191548  4 -  18517816 A--------TTC
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Piliocolobus_badius.k141_1234363                           40664  4 +     62158 a--------tcc
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        35386  4 +     89929 a--------tcc
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            36802  4 +     51399 a--------tcc
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14293040  4 -  14605196 A--------TCC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189128111  4 + 189387572 A--------TCC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9567719  4 +   9816681 a--------tcc
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               70313  4 -     81375 a--------tcc
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              2133  4 +     19060 a--------tcc
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2594394  4 -   4620579 A--------TTA
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     988387  4 +   2598838 A--------TTA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          26697  4 +     38485 a--------tta
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             2858  4 +      4256 a--------tta
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          24218  4 +     35766 a--------tta
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           2400  4 -     24134 a--------tta
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        26213  4 -     67325 a--------tta
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           2450  4 -      6182 a--------tta
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             7289  4 -     21651 A--------TTT
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            12769  4 -     21811 A--------TTG
i Pteronotus_parnellii.KE909381.1                        I 1 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         38292  4 +     42204 a--------ttg
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 12 C 0
s Pteropus_alecto.KB030862.1                              22974866  4 +  28871421 a--------ttg
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1357955  4 +   4952924 a--------ttg
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20272373  4 -  38429054 a--------ttg
i Puma_concolor.QAVW01001104.1                           I 11 C 0
s Pygathrix_cinerea.k141_1153803                             12147  4 -     91421 a--------tcc
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7606273  4 +   7812017 a--------tcc
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             12121  4 -     72585 a--------tcc
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53567803  4 +  90668790 a--------ttt
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             3828  4 -     11128 a--------tcc
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91233183  4 - 195417433 A--------TCC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7668832  4 +   7961872 a--------tcc
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85859  4 -     96226 a--------ttg
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               5045  4 -      8359 a--------tga
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            11353  4 -     13588 a--------tca
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              4991  4 -      6207 a--------tca
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               10718  4 +     13640 a--------tca
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               5581  4 +      8564 a--------tca
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209465858  4 + 209938924 a--------tca
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 5072  4 -      9399 a--------tca
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 2218  4 +      3421 a--------tca
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119948397  4 - 121099817 A--------TCA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       20864  4 +     46362 a--------tca
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               20959  4 +     45824 a--------tca
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             37574  4 -     64574 a--------tca
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                                580  4 -     23631 a--------tca
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 20852  4 -     61129 a--------tca
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          16656  4 -     19888 a--------acc
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      23858  4 +     39453 a--------tcc
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            4384  4 +     27826 a--------tcc
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             3905  4 -     19483 a--------tcc
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      3967  4 +      7198 a--------acc
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         12227  4 +     15514 a--------tcc
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    10953  4 -     12148 A--------TTC
i Sigmodon_hispidus.SigHis_scaffold_60841                I 13 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               1893  4 +   1910179 A--------TTG
i Solenodon_paradoxus.SolPar_flattened_line_126          I 1 C 0
s Spermophilus_dauricus.KZ294078.1                         1950440  4 -   3870691 a--------ttc
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             28809  4 +     97271 a--------ttg
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 12 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              16403  4 -    196729 A--------TTG
i Suricata_suricatta.SurSur_flattened_line_6629          I 11 C 0
s Sus_scrofa.JH118708.1                                      33309 12 -     47482 cctggagaactg
i Sus_scrofa.JH118708.1                                  I 3 C 0
s Symphalangus_syndactylus.tarseq_199                      1090434  4 -   1523678 a--------tcc
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 8712  3 +     41958 ---------CTG
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      116824  4 -    156842 a--------ttg
i Tapirus_indicus.TapInd_scaffold_9301                   I 11 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    385277  4 +    539355 a--------ttg
i Tapirus_terrestris.TapTer_scaffold_755                 I 11 C 0
s Tarsius_lariang.k141_2201908                               23758  2 +     70052 a--------t--
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_2029956                               3103  2 +      4644 a--------t--
i Tarsius_wallacei.k141_2029956                          C 0 C 0
s Theropithecus_gelada.CM009954.1                        186425552  4 + 186847797 A--------TCC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          7957  4 -     20410 a--------tcc
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    12152  4 +     15221 a--------tcc
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        8058  4 +     19930 a--------tcc
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       4488  4 -     19997 a--------tcc
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            44608  4 -     60166 a--------tcc
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        12079  4 -     27529 a--------tcc
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     12021  4 -     18194 a--------tcc
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           5755  4 -     21137 a--------tcc
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    4458  4 -     10723 a--------tcc
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         3610  4 +      9834 a--------tcc
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        21925  4 +     32220 a--------tcc
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5936025  4 +   6242583 a--------tcc
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        5273  4 +     20839 a--------tcc
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2152508  4 +   4065304 a--------tta
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     5821  4 -     10553 A--------TTA
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4848527  4 -   5085361 a--------ttg
i Ursus_maritimus.KK499267.1                             I 11 C 0
s Varecia_rubra.k141_590885                                   9077  4 +     50397 a--------tta
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              9131  4 +     24756 a--------tta
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5369983  4 -   5488506 t--------ttg
i Vicugna_pacos.KN270157.1                               I 3 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  8989  4 -     43706 a--------ttg
i Vulpes_lagopus.VulLag_flattened_line_30954             I 11 C 0
s Xerus_inauris.XerIna_scaffold_48378                        21815  4 -     24430 a--------ttc
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          3227  4 +     86975 a--------ttg
i Zalophus_californianus.ZalCal_flattened_line_17732     I 19 C 0
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519  0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188  0 +      1777 C
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383  9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   2809  0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 70244  0 +    116680 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Oryctolagus_cuniculus.CM000791.1                        67144574 44 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    757963  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186890  0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3730 44 -     14121 I
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            61949  0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Crocidura_indochinensis.CroInd_scaffold_287352              1624  0 +      4208 I
e Condylura_cristata.JH655891.1                           17547132  5 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            171068  0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15969  0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            5641  0 -      6351 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       3738  3 +     62944 A--------TG
s Acinonyx_jubatus.LLWD01001279.1                           825381  3 -   1699592 g--------tg
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9508635  3 -  29979442 g--------tg
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             77422  3 -    347723 g--------ta
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     71634  3 -     89534 A--------TT
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   11658  3 -     52922 a--------tg
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         11592  3 -     28001 a--------ta
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          2038  3 -     18505 a--------ta
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           2887  3 -     12518 a--------ta
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                               491  3 -     27731 g--------tg
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                 614  3 +      3134 g--------tg
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                                752  3 -     45847 g--------tg
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                21956  3 +     25266 g--------tg
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           1140  3 +      2906 g--------tg
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            15253  3 -     18578 g--------tg
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                               642  3 +     47717 g--------tg
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                              771  3 -      3544 g--------tg
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             11990  3 +     50774 g--------tg
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  12615  3 -     33861 g--------tg
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            12636  3 -     34016 g--------tg
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4295031  3 -   5030052 G--------TG
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             12637  3 -     34685 g--------tg
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               25758  3 -     47192 g--------tg
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       9306  3 +     20879 a--------tc
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                        7993  3 +     14667 a--------aa
i Arctocebus_calabarensis.k141_2318572                   C 0 I 148
s Avahi_laniger.k141_765380                                  51337  3 -     92717 a--------tg
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              51966  3 +     85213 a--------tg
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             2382  3 -     10423 G--------TG
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             21877  3 +     31915 g--------tg
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            2352  3 +      5267 G--------TG
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23587565  3 - 189096842 G--------TG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              9096  3 -     12001 G--------TG
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10000487 11 -  17673402 cagaactggtg
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2332951 11 -   7040546 cagaactggtg
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  401227 11 -   1652518 cagaactggtg
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17797377  3 -  60362399 g--------tg
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    183434  3 -    185531 g--------tg
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9032820  3 -   9314153 g--------tg
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17957085  3 -  59632846 g--------tg
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18498423  3 +  63665305 g--------tg
i Canis_lupus_orion.HG994398.1                           I 38 C 0
s Castor_canadensis.CasCan_scaffold_2074                    135742  3 +    179628 C--------TT
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     90824  3 +    217609 g--------tg
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          7006  3 -     11392 G--------TG
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               3104  3 -      7577 G--------TG
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Ceratotherium_simum.JH767749.1                          12229501  3 +  27778364 g--------tg
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634            528  3 -     25243 g--------tg
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4472617  3 +   4669795 A--------TG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        11164  3 -     19203 a--------tg
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           5586  3 +      8260 a--------tg
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           5813  3 +     27781 a--------tg
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         5969  3 -     20310 a--------tg
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           8953  3 +     29689 a--------tg
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            3381  3 +      9989 A--------TA
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          11630  3 -     27936 a--------ta
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                             502  3 -     17152 a--------tg
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38814035  3 +  39242232 a--------tg
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21219731  3 -  21565898 a--------tg
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       36850  3 -     53127 a--------tg
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        4136  3 +      7159 a--------tg
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       11653  3 -     27947 a--------tg
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         11626  3 +     17596 a--------tg
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                           851  3 +     26000 A--------TA
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             18764  3 -     52598 a--------tg
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           14109  3 +     57038 g--------tg
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           8024  3 +     11226 g--------tg
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18425591  3 -  18827391 a--------ta
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       12032  3 -     50209 A--------TA
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135419038  3 + 135778131 A--------TA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1907552  3 +   2368649 A--------TG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199947224  3 + 200372422 a--------tg
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              34095  3 +     84244 a--------tg
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          12074  3 -     20389 t--------ta
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             26556  3 -     87169 g--------ta
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    834818  3 +   1526836 G--------TT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12534941  3 -  12879189 a--------tg
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  671353  3 +   1390856 g--------tg
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    4109  3 +    198055 g--------tg
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE759718.1                                   8595  3 +     11740 c--------ta
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Enhydra_lutris.KZ291758.1                               16327387  3 -  41312741 g--------ta
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1281407  3 +   4378816 g--------tg
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18529228  3 -  39960074 g--------tg
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               31243  3 +    498745 g--------tg
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21202233  3 -  21539334 a--------tg
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              11446  3 -     14127 a--------tg
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                4144  3 -     16928 a--------tg
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              13177  3 -     25546 a--------tg
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            10367  3 +     26330 a--------tg
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 11610  3 +     23973 a--------tg
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                10367  3 +     75513 a--------tg
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  8313  3 +     97555 a--------tg
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            11245  3 +     26496 a--------tg
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  1846  3 -     17153 a--------tg
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              11422  3 +    111500 a--------tg
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20235247  3 + 206538554 g--------tg
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20194091  3 + 205367284 g--------tg
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  7603  3 -     36744 g--------tg
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     423673  3 -    453645 A--------GG
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             1380  3 +     11339 A--------GG
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1959596                            5187  3 +      6795 a--------gg
i Galagoides_demidoff.k141_1959596                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_266699               1903  3 +      2098 g--------tg
i Galeopterus_variegatus.GalVar_scaffold_266699          C 0 C 0
s Gorilla_beringei.k141_3596273                              12991  3 -     32273 a--------tg
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186335139  3 + 186649187 a--------tg
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   32175  3 +     78134 a--------tt
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           4495  3 -     19426 a--------tg
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              9644  3 -     15286 a--------tg
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             11282  3 +     18253 a--------tg
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         11385  3 -     41752 a--------tg
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         11222  3 -     16460 a--------tg
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               240407  3 +    327341 G--------TG
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       109890  3 +   1711038 c--------ta
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               41312  3 +     43066 c--------tg
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    431806  3 +    630532 a--------tg
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  42534  3 +     55795 g--------tg
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_307679                               14740  3 -     15490 a--------tg
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              56746  3 +     67168 a--------tg
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189540396  3 - 191637585 a--------tg
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3333290  3 -  11177569 a--------tg
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7517360  3 -   7955117 a--------cc
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   20194  3 +     31101 a--------cg
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8276271  3 -   9596543 A--------TT
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lemur_catta.scaffold_24                                 15521747  3 -  30322482 a--------tg
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        4741  3 +     64341 g--------tg
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           1801  3 +      4941 g--------tg
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4669  3 +     35603 g--------tg
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    26142  3 +     38576 G--------TG
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         22839  3 +     66356 G--------TG
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          8629  3 -     23766 a--------tg
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             26576  3 +     45836 a--------tg
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_320948                           799  3 -      1719 a--------tg
i Lepilemur_ruficaudatus.k141_320948                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      24631  3 +     54090 a--------tg
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3040532  3 +   3914936 g--------ta
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                              1434162  3 +   1826925 a--------tg
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            3138  3 +     11245 A--------TA
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1001976  3 +   6120653 A--------TA
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17953325  3 -  59628241 g--------tg
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               3975  3 +     40492 a--------tg
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59673237  3 +  60120075 a--------tg
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  9731  3 -     26193 a--------tg
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            77535  3 -    114318 a--------tg
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  3242  3 -     23192 a--------tg
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                12694  3 -     29190 a--------tg
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  21262  3 +     37952 a--------tg
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186836350  3 + 187317192 A--------TG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25454913  3 -  25927173 A--------TG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  77111  3 +     89720 a--------tg
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 4108  3 +     20474 a--------tg
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   3910  3 -     14993 a--------tg
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  326780  3 -    668171 a--------tg
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 2220  3 -     24072 a--------tg
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               22849  3 -     45290 a--------tg
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88671  3 +     94391 c--------tg
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23934436  3 -  24302211 a--------tg
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               348569  3 +    752769 a--------tg
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              17523  3 +    737560 c--------tg
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              48908  3 -    317179 c--------tg
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33099672  3 -  40650429 a--------cc
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         8425  3 -    207569 c--------cg
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              8103  3 +     13704 g--------tg
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mico_argentatus.k141_1239457                                2928  3 -      7380 G--------TG
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               1994  3 +     18990 G--------TG
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      2933  3 -      7356 G--------TG
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18289136  3 -  93316391 A--------TG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_534055                           6159  3 -     28506 a--------tg
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         3371  3 -      8324 G--------TA
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      6708  3 -     37649 a--------tg
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 139381  3 -    366855 c--------ta
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   33513  3 +     37127 g--------tg
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              4451  3 +     14296 a--------tt
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               299284  3 -  14710649 g--------ta
i Mustela_putorius.JH418006.1                            C 0 C 0
s Nasalis_larvatus.k141_413338                               12153  3 +     21681 a--------tg
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9147585  3 -   9404916 g--------tg
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102576912  3 - 196305487 a--------ta
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             4598  3 +      8486 a--------ta
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105747339  3 + 199412804 a--------ta
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1360712  2 +   3988456 a--------t-
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              504675  3 -   2017862 g--------ta
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       460340  3 -    559221 g--------tg
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         1215  3 +      8798 a--------gg
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             693382  3 -   1103335 A--------GG
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    41090  3 +     80009 A--------TG
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189140001  3 + 189151597 A--------TG
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  149255  3 +    230217 g--------tg
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                262462  3 +  18783137 g--------tg
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4719098  3 -   8748460 g--------tg
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183440191  3 + 183742232 A--------TG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             3884  3 +     20448 a--------tg
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20560689  3 +  20919399 a--------tg
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   2627  3 +     41871 a--------tg
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     5913  3 +     27711 a--------tg
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  5992  3 +      9205 a--------tg
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10724  3 -     78924 g--------tg
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            7211  3 +     13100 a--------aa
i Perodicticus_ibeanus.k141_855320                       C 0 I 148
s Perodicticus_potto.k141_1092580                             5584  3 +     25941 a--------aa
i Perodicticus_potto.k141_1092580                        C 0 I 148
s Piliocolobus_badius.k141_1234363                           40668  3 +     62158 a--------tg
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        35390  3 +     89929 a--------tg
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            36806  3 +     51399 a--------tg
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14293044  3 -  14605196 A--------TG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189128115  3 + 189387572 A--------TG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9567723  3 +   9816681 a--------tg
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               70317  3 -     81375 a--------tg
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              2137  3 +     19060 a--------tg
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2594398  3 -   4620579 A--------TG
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     988391  3 +   2598838 A--------TG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          26701  3 +     38485 a--------tg
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             2862  3 +      4256 a--------tg
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          24222  3 +     35766 a--------tg
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           2404  3 -     24134 a--------tg
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        26217  3 -     67325 a--------tg
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           2454  3 -      6182 a--------tg
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            12773  3 -     21811 C--------TG
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         38296  3 +     42204 g--------ta
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22974870  3 +  28871421 c--------ta
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1357959  3 +   4952924 c--------ta
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20272377  3 -  38429054 g--------tg
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             12151  3 -     91421 a--------tg
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7606277  3 +   7812017 a--------tg
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             12125  3 -     72585 a--------tg
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             3832  3 -     11128 a--------tg
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91233187  3 - 195417433 A--------TG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7668836  3 +   7961872 a--------tg
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85863  3 -     96226 c--------ta
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               5049  3 -      8359 g--------tg
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            11357  3 -     13588 g--------tg
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              4995  3 -      6207 g--------tg
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               10722  3 +     13640 g--------tg
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               5585  3 +      8564 g--------tg
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209465862  3 + 209938924 g--------tg
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 5076  3 -      9399 g--------tg
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 2222  3 +      3421 g--------tg
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119948401  3 - 121099817 G--------TG
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       20868  3 +     46362 g--------tg
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               20963  3 +     45824 g--------tg
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             37578  3 -     64574 g--------cg
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                                584  3 -     23631 g--------tg
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 20856  3 -     61129 g--------tg
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          16660  3 -     19888 a--------tg
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      23862  3 +     39453 a--------tg
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            4388  3 +     27826 a--------tg
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             3909  3 -     19483 a--------tg
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      3971  3 +      7198 a--------tg
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         12231  3 +     15514 a--------tg
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               1897  3 +   1910179 G--------TC
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1950444  3 -   3870691 a--------cc
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             28813  3 +     97271 g--------ta
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              16407  3 -    196729 G--------TG
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.JH118708.1                                      33321  3 -     47482 a--------tg
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1090438  3 -   1523678 a--------tg
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 8715  3 +     41958 C--------TG
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      116828  3 -    156842 g--------tg
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    385281  3 +    539355 g--------tg
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Theropithecus_gelada.CM009954.1                        186425556  3 + 186847797 A--------TG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          7961  3 -     20410 a--------cg
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    12156  3 +     15221 a--------tg
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        8062  3 +     19930 a--------cg
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       4492  3 -     19997 a--------tg
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            44612  3 -     60166 a--------tg
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        12083  3 -     27529 a--------cg
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     12025  3 -     18194 a--------tg
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           5759  3 -     21137 a--------tg
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    4462  3 -     10723 a--------tg
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         3614  3 +      9834 a--------tg
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        21929  3 +     32220 a--------tg
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5936029  3 +   6242583 a--------tg
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        5277  3 +     20839 a--------tg
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2152512  3 +   4065304 g--------tg
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     5825  3 -     10553 C--------TG
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4848531  3 -   5085361 g--------tg
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   9081  3 +     50397 a--------tg
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              9135  3 +     24756 a--------tg
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5369987 11 -   5488506 gagaactggtg
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  8993  3 -     43706 g--------tg
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        21819  3 -     24430 a--------ac
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          3231  3 +     86975 g--------ta
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519  0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188  0 +      1777 C
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Mus_pahari.LT608297.1                                   31352011  0 -  89631738 C
e Mus_spretus.CM004101.1                                  90749803  0 - 130317789 C
e Mus_musculus.chr8                                       87647725  0 - 129401213 C
e Mus_caroli.LT608237.1                                   84358736  0 - 120012414 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383  9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   2809  0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Tarsius_wallacei.k141_2029956                               3105  0 +      4644 C
e Tarsius_lariang.k141_2201908                               23760  0 +     70052 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 70244  0 +    116680 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    10957  0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rattus_norvegicus.chr16                                 53567807  0 +  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Psammomys_obesus.NESX01036370.1                             7293  0 -     21651 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18191552  0 -  18517816 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Oryctolagus_cuniculus.CM000791.1                        67144574 44 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    76953  0 +    102263 C
e Ondatra_zibethicus.OndZib_scaffold_46174                   21877  0 +     28053 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    757963  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186890  0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11257761  0 -  27267610 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12180122  0 -  29670104 C
e Meriones_unguiculatus.MerUng_scaffold_7390                 29651  0 +    140813 C
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3730 44 -     14121 I
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Ellobius_talpinus.LOJH01109367.1                            3305  0 -      6299 C
e Ellobius_lutescens.LOEQ01008920.1                          17251  0 -    110024 C
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            61949  0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Crocidura_indochinensis.CroInd_scaffold_287352              1624  0 +      4208 I
e Cricetulus_griseus.LT883664.1                           11665063  0 + 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_18520                 47725  0 +     63868 C
e Condylura_cristata.JH655891.1                           17547132  5 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            171068  0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15969  0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            5641  0 -      6351 C
e Cephalopachus_bancanus.k141_1423433                         3152  0 +     31688 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Carlito_syrichta.NW_007259797.1                           153653  0 -    496798 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     68024  0 +     87051 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       3741  9 +     62944 CTGA-------AAAAG
s Acinonyx_jubatus.LLWD01001279.1                           825384  8 -   1699592 t-ga-------aaagg
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9508638  8 -  29979442 t-ga-------aaagg
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             77425  8 -    347723 t-ga-------aaagg
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     71637  8 -     89534 TT-G-------GGCAA
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   11661  9 -     52922 ctga-------aaaag
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         11595  9 -     28001 ctga-------aaaag
i Allochrocebus_lhoesti.k141_4309873                     C 0 I 2
s Allochrocebus_preussi.k141_1442296                          2041  9 -     18505 ctga-------aaaag
i Allochrocebus_preussi.k141_1442296                     C 0 I 2
s Allochrocebus_solatus.k141_166128                           2890  9 -     12518 ctga-------aaaag
i Allochrocebus_solatus.k141_166128                      C 0 I 2
s Alouatta_belzebul.k141_3238538                               494  9 -     27731 ctga-------aaaag
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                 617  9 +      3134 ctga-------aaaag
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                                755  9 -     45847 ctga-------aaaag
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                21959  9 +     25266 ctga-------aaaag
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           1143  9 +      2906 ctga-------aaaag
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            15256  9 -     18578 ctga-------aaaag
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                               645  9 +     47717 ctga-------aaaag
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                              774  9 -      3544 ctga-------aaaag
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             11993  9 +     50774 ctga-------aaaag
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  12618  9 -     33861 ctga-------aaaac
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            12639  9 -     34016 ctgg-------aaaac
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4295034  9 -   5030052 CTGA-------AAAAC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             12640  9 -     34685 ctga-------aaaac
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               25761  9 -     47192 ctga-------aaaac
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       9309  9 +     20879 ttgg-------aaaag
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                        8144  9 +     14667 ttgg-------acaat
i Arctocebus_calabarensis.k141_2318572                   I 148 C 0
s Avahi_laniger.k141_765380                                  51340  8 -     92717 t-gg-------aaaat
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              51969  8 +     85213 t-gg-------aaaat
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             2385  9 -     10423 CGGA-------AAAAC
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             21880  9 +     31915 ctga-------aaaac
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            2355  9 +      5267 CCGA-------AAAAC
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23587568  9 - 189096842 CCGA-------AAAAC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              9099  9 -     12001 CTGA-------AAAAC
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10000498  8 -  17673402 t-ag-------aaaag
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2332962  8 -   7040546 t-ag-------aaaag
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  401238  8 -   1652518 t-ag-------aaaag
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17797380  8 -  60362399 t-ga-------aaagg
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    183437  8 -    185531 t-ga-------aaagg
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9032823  8 -   9314153 t-ga-------aaagg
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17957088  8 -  59632846 t-ga-------aaagg
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18498426  8 +  63665305 t-ga-------aaAGG
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           153653  8 -    496798 -TGG-------GAAAG
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    135745  9 +    179628 TTAA-------AAACA
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     90827  8 +    217609 t-ag-------aaaag
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          7009  9 -     11392 CCGA-------AAAAC
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               3107  9 -      7577 CCGA-------AAAAC
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         3152  8 +     31688 -tgg-------gaaag
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12229504  8 +  27778364 t-gg-------gaaag
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634            531  8 -     25243 t-gg-------gaaag
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4472620  9 +   4669795 CTGA-------AAAAG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        11167  9 -     19203 ctga-------aaaag
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           5589  9 +      8260 ctga-------aaaag
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           5816  9 +     27781 ctga-------aaaag
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         5972  9 -     20310 ctga-------aaaag
i Cercopithecus_ascanius.k141_1024104                    C 0 I 5
s Cercopithecus_cephus.k141_1078548                           8956  9 +     29689 ctga-------aaaag
i Cercopithecus_cephus.k141_1078548                      C 0 I 2
s Cercopithecus_diana.k141_2427854                            3384  9 +      9989 CTGA-------AAAAG
i Cercopithecus_diana.k141_2427854                       C 0 I 2
s Cercopithecus_hamlyni.k141_187466                          11633  9 -     27936 ctga-------aaaag
i Cercopithecus_hamlyni.k141_187466                      C 0 I 2
s Cercopithecus_lowei.k141_1854285                             505  9 -     17152 ctga-------aaaag
i Cercopithecus_lowei.k141_1854285                       C 0 I 5
s Cercopithecus_albogularis.ctg5                                38814038  9 +  39242232 ctga-------aaaag
i Cercopithecus_albogularis.ctg5                               C 0 I 2
s Cercopithecus_mona.ctg39                                21219734  9 -  21565898 ctga-------aaaag
i Cercopithecus_mona.ctg39                               C 0 I 5
s Cercopithecus_neglectus.k141_2526306                       36853  9 -     53127 ctga-------aaaag
i Cercopithecus_neglectus.k141_2526306                   C 0 I 5
s Cercopithecus_nictitans.k141_3278028                        4139  9 +      7159 ctga-------aaaag
i Cercopithecus_nictitans.k141_3278028                   C 0 I 2
s Cercopithecus_petaurista.k141_807961                       11656  9 -     27947 ctga-------aaaag
i Cercopithecus_petaurista.k141_807961                   C 0 I 5
s Cercopithecus_pogonias.k141_822820                         11629  9 +     17596 ctga-------aaaag
i Cercopithecus_pogonias.k141_822820                     C 0 I 5
s Cercopithecus_roloway.k141_2567858                           854  9 +     26000 CTGA-------AAAAG
i Cercopithecus_roloway.k141_2567858                     C 0 I 2
s Cheirogaleus_major.k141_333249                             18767  9 -     52598 ttgg-------aaaag
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           14112  9 +     57038 ttgg-------aaaag
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           8027  9 +     11226 ctga-------aaaac
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18425594  9 -  18827391 ctga-------aaaag
i Chlorocebus_aethiops.ctg25                             C 0 I 5
s Chlorocebus_pygerythrus.k141_1025673                       12035  9 -     50209 CTGA-------AAAAG
i Chlorocebus_pygerythrus.k141_1025673                   C 0 I 2
s Chlorocebus_sabaeus.CM001947.1                         135419041  9 + 135778131 CTGA-------AAAAG
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 2
s Colobus_angolensis.KN981557.1                            1907555  9 +   2368649 CTGA-------AAAAG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199947227  9 + 200372422 ctga-------aaaag
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              34098  9 +     84244 ctga-------aaaag
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          12077  8 -     20389 c-gg-------aaaag
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             26559  7 -     87169 --aa-------aaaga
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    834821  9 +   1526836 ATGA-------AACAG
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12534944  9 -  12879189 ttgg-------aaaag
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  671356  8 +   1390856 t-gg-------gaaaa
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    4112  8 +    198055 t-gg-------gaaag
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE759718.1                                   8598  8 +     11740 t-gg-------aaaag
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Enhydra_lutris.KZ291758.1                               16327390  8 -  41312741 t-ga-------aaagg
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1281410  8 +   4378816 t-gg-------aaaag
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18529231  8 -  39960074 t-gg-------aaaag
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               31246  8 +    498745 t-gg-------aaaag
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21202236  9 -  21539334 ctga-------aaaag
i Erythrocebus_patas.Contig38                            C 0 I 2
s Eulemur_albifrons.k141_342033                              11449  9 -     14127 ttgg-------aaaag
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                4147  9 -     16928 ttgg-------aagag
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              13180  9 -     25546 ttgg-------aaaag
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            10370  9 +     26330 ttgg-------aaaag
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 11613  9 +     23973 ttgg-------aaaag
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                10370  9 +     75513 ttgg-------aaaag
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  8316  9 +     97555 ttgg-------aaaag
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            11248  9 +     26496 ttgg-------aaaag
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  1849  9 -     17153 ttgg-------aaaag
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              11425  9 +    111500 ttgg-------aaaag
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20235250  8 + 206538554 t-ga-------aaagg
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20194094  8 + 205367284 t-ga-------aaagg
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  7606  8 -     36744 t-ga-------aaagg
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     423676  9 -    453645 TTGG-------AAAAA
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             1383  9 +     11339 TTGG-------AAAAA
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1959596                            5190  9 +      6795 ttag-------aaaag
i Galagoides_demidoff.k141_1959596                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_266699               1906  9 +      2098 ttgg-------gaaag
i Galeopterus_variegatus.GalVar_scaffold_266699          C 0 I 29
s Gorilla_beringei.k141_3596273                              12994  9 -     32273 ctga-------aaaag
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186335142  9 + 186649187 ctga-------aaaag
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   32178  9 +     78134 ttga-------aaaag
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           4498  9 -     19426 ttgg-------aaaag
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              9647  9 -     15286 ttgg-------aaaag
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             11285  9 +     18253 ttgg-------aaaag
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         11388  9 -     41752 ttgg-------aaaag
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         11225  9 -     16460 ttgg-------aaaag
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               240410  8 +    327341 T-GA-------AGAGG
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       109893  8 +   1711038 t-gg-------aaaag
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               41315  8 +     43066 c-gg-------aaaag
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    431809  9 +    630532 ctga-------aaaag
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  42537  8 +     55795 t-ga-------aaagg
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_307679                               14743  9 -     15490 ctga-------aaaag
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              56749  9 +     67168 ctga-------aaaag
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189540399  9 - 191637585 ctga-------aaaag
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3333293  9 -  11177569 ctga-------aaaag
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7517363  9 -   7955117 atgg-------aaaag
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   20197  8 +     31101 t-gg-------aaaac
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8276274  8 -   9596543 TC-A-------GACAA
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lemur_catta.scaffold_24                                 15521750  9 -  30322482 ttgg-------aaaag
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        4744  9 +     64341 ctga-------aaaac
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           1804  9 +      4941 ctga-------aaaac
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4672  9 +     35603 ctga-------aaaac
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    26145  9 +     38576 CTGA-------AAAAT
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         22842  9 +     66356 CTGA-------AAAAT
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          8632  9 -     23766 ttgg-------aaaag
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             26579  9 +     45836 ttgg-------aaaag
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_320948                           802  9 -      1719 ttgg-------aaaag
i Lepilemur_ruficaudatus.k141_320948                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      24634  9 +     54090 ttgg-------aaaag
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3040535  8 +   3914936 t-ga-------aaagg
i Leptonychotes_weddellii.KB714746.1                     C 0 I 1020
s Lophocebus_aterrimus.ctg367                              1434165  9 +   1826925 ctga-------aaaag
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            3141  9 +     11245 TTGG-------AAAAG
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1001979  9 +   6120653 TTGG-------AAAAG
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17953328  8 -  59628241 t-ga-------aaagg
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               3978  9 +     40492 ctga-------aaaag
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59673240  9 +  60120075 ctga-------aaaag
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  9734  9 -     26193 ctga-------aaaag
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            77538  9 -    114318 ctga-------aaaag
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  3245  9 -     23192 ctga-------aaaag
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                12697  9 -     29190 ctga-------aaaag
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  21265  9 +     37952 ctga-------aaaag
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186836353  9 + 187317192 CTGA-------AAAAG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25454916  9 -  25927173 CTAA-------AAAAG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  77114  9 +     89720 ctga-------aaaag
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 4111  9 +     20474 ctga-------aaaag
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   3913  9 -     14993 ctga-------aaaag
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  326783  9 -    668171 ctga-------aaaag
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 2223  9 -     24072 ctga-------aaaag
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               22852  9 -     45290 ctga-------aaaag
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88674  8 +     94391 t-gg-------aaaag
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23934439  9 -  24302211 ctga-------aaaag
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               348572  9 +    752769 ctga-------aaaag
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              17526  8 +    737560 t-gg-------aaaac
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              48911  8 -    317179 t-gg-------aaaac
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33099675  9 -  40650429 atgg-------aaaag
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         8428  8 -    207569 t-gg-------aaaag
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              8106  8 +     13704 t-ga-------aaagg
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mico_argentatus.k141_1239457                                2931  9 -      7380 CGGA-------AAAAC
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               1997  9 +     18990 CGGA-------AAAAC
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      2936  9 -      7356 CGGA-------AAAAC
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18289139  9 -  93316391 TTGG-------AAAAG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_534055                           6162  9 -     28506 ctga-------aaaag
i Miopithecus_ogouensis.k141_534055                      C 0 I 2
s Mirounga_angustirostris.MirAng_flattened_line_93702         3374  8 -      8324 T-GA-------AAAGG
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 216
s Mirza_zaza.k141_952172                                      6711  9 -     37649 ttgg-------aaaag
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 139384  8 -    366855 t-gg-------aaaag
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   33516  8 +     37127 t-ga-------aaagg
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              4454  9 +     14296 ttgg-------aaaag
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               299287  8 -  14710649 t-ga-------aaagg
i Mustela_putorius.JH418006.1                            C 0 C 0
s Nasalis_larvatus.k141_413338                               12156  9 +     21681 ctga-------aaaag
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    757963  5 +    783361 -----------aaAAG
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9147588  8 -   9404916 t-ga-------aaagg
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102576915  9 - 196305487 ttgg-------aaaag
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             4601  9 +      8486 ttgg-------aaaag
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105747342  9 + 199412804 ttgg-------aaaag
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1360714 13 +   3988456 ---tccttttttttaa
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              504678  8 -   2017862 t-ga-------aaagg
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       460343  8 -    559221 t-ga-------aaagg
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         1218  9 +      8798 ttgg-------aaaaa
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             693385  9 -   1103335 TTGG-------AAAAA
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    41093  9 +     80009 CTGA-------AAAAG
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189140004  9 + 189151597 CTGA-------AAAAG
i Pan_troglodytes.CM009242.2                             C 0 I 23
s Panthera_onca.PanOnc_flattened_line_3271                  149258  8 +    230217 t-ga-------aaagg
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                262465  8 +  18783137 t-ga-------aaagg
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4719101  8 -   8748460 t-ga-------aaagg
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183440194  9 + 183742232 CTGA-------AAAAG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             3887  9 +     20448 ctga-------aaaag
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20560692  9 +  20919399 ctga-------aaaag
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   2630  9 +     41871 ctga-------aaaag
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     5916  9 +     27711 ctga-------aaaag
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  5995  9 +      9205 ctga-------aaaag
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10727  8 -     78924 t-ga-------aaagg
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            7362  9 +     13100 ttgg-------agaat
i Perodicticus_ibeanus.k141_855320                       I 148 C 0
s Perodicticus_potto.k141_1092580                             5735  9 +     25941 ttgg-------agaat
i Perodicticus_potto.k141_1092580                        I 148 C 0
s Piliocolobus_badius.k141_1234363                           40671  9 +     62158 ctga-------aaaag
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        35393  9 +     89929 ctga-------aaaag
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            36809  9 +     51399 ctga-------aaaag
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14293047  9 -  14605196 CTGA-------AAAAG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189128118  9 + 189387572 CTGA-------AAAAG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9567726  9 +   9816681 ctga-------aaaag
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               70320  9 -     81375 ctga-------aaaag
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              2140  9 +     19060 ctga-------aaaag
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2594401  9 -   4620579 TTGG-------AAAAG
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     988394  8 +   2598838 T-GG-------AAAAC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          26704  8 +     38485 t-gg-------aaaac
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             2865  8 +      4256 t-gg-------aaaac
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          24225  8 +     35766 t-gg-------aaaac
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           2407  8 -     24134 t-gg-------aaaac
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        26220  8 -     67325 t-ga-------aaaac
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           2457  8 -      6182 t-gg-------aaaac
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            12776  8 -     21811 C-AG-------AAAAG
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         38299  8 +     42204 t-ga-------aaagg
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22974873  8 +  28871421 t-gg-------aaaag
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1357962  8 +   4952924 t-gg-------aaaag
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20272380  8 -  38429054 t-ga-------aaagg
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             12154  9 -     91421 ctga-------aaaag
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7606280  9 +   7812017 ctga-------aaaag
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             12128  9 -     72585 ctga-------aaaag
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             3835  9 -     11128 ctga-------aaaag
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91233190  9 - 195417433 CTGA-------AAAAG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7668839  9 +   7961872 ctga-------aaaag
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85866  8 -     96226 t-gg-------aaaag
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               5052  9 -      8359 ctga-------aaaac
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            11360  9 -     13588 ctga-------aaaac
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              4998  9 -      6207 ctga-------aaaac
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               10725  9 +     13640 ctga-------aaaac
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               5588  9 +      8564 ctga-------aaaac
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209465865  9 + 209938924 ctga-------aaaac
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 5079  9 -      9399 ctga-------aaacc
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 2225  9 +      3421 ctga-------aaaac
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119948404  9 - 121099817 CTGA-------AAAAC
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       20871  9 +     46362 ctga-------aaaac
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               20966  9 +     45824 ctga-------aaaac
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             37581  9 -     64574 ctga-------aaaac
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                                587  9 -     23631 ctga-------aaaac
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 20859  9 -     61129 ctga-------aaaac
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          16663  9 -     19888 ctga-------aaaag
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      23865  9 +     39453 ctga-------aaaag
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            4391  9 +     27826 ctga-------aaaag
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             3912  9 -     19483 ctga-------aaaag
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      3974  9 +      7198 ctga-------aaaag
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         12234  9 +     15514 ctga-------aaaag
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               1900  8 +   1910179 T-AA-------GAAAG
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1950447  9 -   3870691 atgg-------aaaag
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             28816  8 +     97271 t-ga-------aaagg
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              16410  8 -    196729 T-GA-------AAAGG
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.JH118708.1                                      33324  8 -     47482 t-ag-------acaag
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1090441  9 -   1523678 ctga-------aaaag
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 8718  8 +     41958 T-GG-------AGAAG
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      116831  8 -    156842 t-gg-------aaaag
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    385284  8 +    539355 t-gg-------aaaat
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               23760  8 +     70052 -tgg-------gaaag
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_2029956                               3105  8 +      4644 -tgg-------gaaag
i Tarsius_wallacei.k141_2029956                          C 0 C 0
s Theropithecus_gelada.CM009954.1                        186425559  9 + 186847797 CTGA-------AAAAG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          7964  9 -     20410 ctga-------aaaag
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    12159  9 +     15221 ctga-------aaaag
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        8065  9 +     19930 ctga-------aaaag
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       4495  9 -     19997 ctga-------aaaag
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            44615  9 -     60166 ctga-------aaaag
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        12086  9 -     27529 ctga-------aaaag
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     12028  9 -     18194 ctga-------aaaag
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           5762  9 -     21137 ctga-------aaaag
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    4465  9 -     10723 ctga-------aaaag
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         3617  9 +      9834 ctga-------aaaag
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        21932  9 +     32220 ctga-------aaaag
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5936032  9 +   6242583 ctga-------aaaag
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        5280  9 +     20839 ctga-------aaaag
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2152515  9 +   4065304 ttgg-------aaaag
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     5828  9 -     10553 TTGG-------AAAAG
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4848534  8 -   5085361 t-ga-------aaagg
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   9084  9 +     50397 ttgg-------gaaaa
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              9138  9 +     24756 ttgg-------gaaaa
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5369998  8 -   5488506 t-ag-------aaaag
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  8996  8 -     43706 t-ga-------aaagg
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        21822  9 -     24430 atgg-------aaaag
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          3234  8 +     86975 t-ga-------aaagg
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519  0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188  0 +      1777 C
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Mus_pahari.LT608297.1                                   31352011  0 -  89631738 C
e Mus_spretus.CM004101.1                                  90749803  0 - 130317789 C
e Mus_musculus.chr8                                       87647725  0 - 129401213 C
e Mus_caroli.LT608237.1                                   84358736  0 - 120012414 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383  9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   2809  0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 70244  0 +    116680 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    10957  0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rattus_norvegicus.chr16                                 53567807  0 +  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Psammomys_obesus.NESX01036370.1                             7293  0 -     21651 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18191552  0 -  18517816 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Oryctolagus_cuniculus.CM000791.1                        67144574 44 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    76953  0 +    102263 C
e Ondatra_zibethicus.OndZib_scaffold_46174                   21877  0 +     28053 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186890  0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11257761  0 -  27267610 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12180122  0 -  29670104 C
e Meriones_unguiculatus.MerUng_scaffold_7390                 29651  0 +    140813 C
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3730 44 -     14121 I
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Ellobius_talpinus.LOJH01109367.1                            3305  0 -      6299 C
e Ellobius_lutescens.LOEQ01008920.1                          17251  0 -    110024 C
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            61949  0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Crocidura_indochinensis.CroInd_scaffold_287352              1624  0 +      4208 I
e Cricetulus_griseus.LT883664.1                           11665063  0 + 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_18520                 47725  0 +     63868 C
e Condylura_cristata.JH655891.1                           17547132  5 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            171068  0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15969  0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            5641  0 -      6351 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     68024  0 +     87051 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       3750 24 +     62944 AT-----AC-C----AC-----ATCTTTGG-TGTC---AGGG---G
s Acinonyx_jubatus.LLWD01001279.1                           825392 24 -   1699592 a-c----ac-c----ac-----attttcaa-cgtc---agaa---g
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     68024 17 +     87051 ----------------------atatttga-tgta---aaga---g
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9508646 24 -  29979442 a-c----ac-t----ac-----atatttga-catc---ggga---g
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             77433 24 -    347723 a-c----ac-t----at-----atattcga-catc---agga---g
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     71645 24 -     89534 A-----TAC-C----AC-----ATATTTGG-TGTT---AAGG---G
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   11670 23 -     52922 at-----ac-c----ac-----atctttgg-tgtc---agG----G
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         11606 21 -     28001 ---------------ac--cacatctttgg-tgtc---agG----G
i Allochrocebus_lhoesti.k141_4309873                     I 2 C 0
s Allochrocebus_preussi.k141_1442296                          2052 21 -     18505 ---------------ac--cacatctttgg-tgtc---agG----G
i Allochrocebus_preussi.k141_1442296                     I 2 C 0
s Allochrocebus_solatus.k141_166128                           2901 21 -     12518 ---------------ac--cacatctttgg-tgtc---agG----G
i Allochrocebus_solatus.k141_166128                      I 2 C 0
s Alouatta_belzebul.k141_3238538                               503 22 -     27731 gt-----ac-c----ac-----atgtttgg-tgtt-----ag---G
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                 626 22 +      3134 gt-----ac-c----ac-----atctttgg-tgtt-----ag---G
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                                764 22 -     45847 gt-----ac-c----ac-----atgtttgg-tgtt-----ag---G
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                21968 22 +     25266 gt-----ac-c----ac-----atctttgg-tgtt-----ag---G
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           1152 22 +      2906 gt-----ac-c----ac-----atctttgg-tgtt-----ag---G
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            15265 22 -     18578 gt-----ac-c----ac-----atctttgg-tgtt-----ag---G
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                               654 22 +     47717 gt-----ac-c----ac-----atctttgg-tgtT-----GG---G
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                              783 22 -      3544 gt-----ac-c----ac-----atctttgg-tgtt-----ag---G
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             12002 22 +     50774 gt-----ac-c----ac-----atctttgg-tgtt-----ag---G
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  12627 22 -     33861 at-----ac-c----ac-----atctttgg-tgtc-----gg---g
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            12648 22 -     34016 at-----ac-c----ac-----atctttgg-tgtT-----GG---G
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4295043 22 -   5030052 AT-----AC-C----AC-----ATCTTTGG-TGTC-----GG---G
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             12649 22 -     34685 at-----ac-c----ac-----atctttgg-tgtc-----gg---g
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               25770 22 -     47192 at-----ac-c----ac-----atctttgg-tgtc-----gg---g
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       9318 24 +     20879 a-----tac-c----ac-----atatttag-tgtc---agGG---G
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                        8153 27 +     14667 ac-----tc-agagaaA-----GAATTTGG-TGAC---AGGG----
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Avahi_laniger.k141_765380                                  51348 23 -     92717 gc-----ac-c----ac-----gtatttgg-tgtt---agGG----
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              51977 23 +     85213 gc-----ac-c----at-----gtatttgg-tgtt---agGG----
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             2394 19 -     10423 AT-----CC-C----AC-----ATCTTTGG-TGTC-----------
i Callibella_humilis.k141_1278103                        C 0 I 1
s Callimico_goeldii.k141_1091182                             21889 21 +     31915 gt-----ac-c----ac-----atctttgg-tgtc-----ag----
i Callimico_goeldii.k141_1091182                         C 0 I 1
s Callithrix_geoffroyi.k119_512088                            2364 19 +      5267 GT-----CC-C----AC-----ATCTTTGG-TGTC-----------
i Callithrix_geoffroyi.k119_512088                       C 0 I 1
s Callithrix_jacchus.pat_scaffold_3                       23587577 19 - 189096842 GT-----CC-C----AC-----ATCTTTGG-TGTC-----------
i Callithrix_jacchus.pat_scaffold_3                      C 0 I 1
s Callithrix_kuhlii.k119_1164682                              9108 19 -     12001 AT-----CC-C----AC-----ATCTTTGG-TGTC-----------
i Callithrix_kuhlii.k119_1164682                         C 0 I 1
s Camelus_bactrianus.KN276810.1                           10000506 24 -  17673402 a-c----ac-a----at-----gtatttgg-tTTC---CGTG---G
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2332970 24 -   7040546 a-c----ac-a----at-----gtatttgg-tTTC---CGTG---G
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  401246 24 -   1652518 a-c----ac-a----at-----gtatttgg-tTTC---CGTG---G
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17797388 24 -  60362399 g-c----ag-t----ac-----atattcga-catc---agga---g
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    183445 24 -    185531 g-c----ag-t----ac-----atattcga-catc---agga---g
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9032831 24 -   9314153 g-c----ag-t----ac-----atattcga-catc---agga---g
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17957096 24 -  59632846 g-c----ag-t----ac-----atattcga-catc---agga---g
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18498434 24 +  63665305 G-----CAG-T----AC-----ATATTCGa-catc---agga---g
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           153661 24 -    496798 AC-----AC-C----AC-----ATATTGGG-TATT---aggg---g
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    135754 24 +    179628 A-----CAT-C----GA-----ATGCTTGA-TGTC---CCAA---G
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     90835 25 +    217609 a-c----ac-c----at-----gtatttggtgacT---ATGA---A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          7018 19 -     11392 GT-----CC-C----AC-----ATCTTTGA-TGTC-----------
i Cebuella_niveiventris.k141_1251222                     C 0 I 1
s Cebuella_pygmaea.k141_1309012                               3116 19 -      7577 AT-----CC-C----AC-----ATCTTTGA-TGTC-----------
i Cebuella_pygmaea.k141_1309012                          C 0 I 1
s Cephalopachus_bancanus.k141_1423433                         3160 24 +     31688 ac-----ac-c----ac-----atattggg-tgtt---agGG---G
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12229512 23 +  27778364 a-c----ac-c----at-----acatttgg-tgtc---a-gg---g
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634            539 23 -     25243 a-c----ac-c----at-----acatttgg-tgtc---a-gG---G
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4472629 23 +   4669795 AT-----AC-C----AC-----ATCTTTGG-TGTC---AGG----G
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        11176 23 -     19203 at-----ac-c----ac-----atctttgg-tgtc---agG----G
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           5598 23 +      8260 at-----ac-c----ac-----atctttgg-tgtc---agG----G
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           5825 23 +     27781 at-----ac-c----ac-----atctttgg-tgtc---agG----G
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         5986 18 -     20310 ---------------ac-----atctttgg-tgtc---agG----G
i Cercopithecus_ascanius.k141_1024104                    I 5 C 0
s Cercopithecus_cephus.k141_1078548                           8967 18 +     29689 ---------------ac-----atctttgg-tgtc---agG----G
i Cercopithecus_cephus.k141_1078548                      I 2 C 0
s Cercopithecus_diana.k141_2427854                            3395 18 +      9989 ---------------AC-----ATCTTTGG-TGTC---AGG----G
i Cercopithecus_diana.k141_2427854                       I 2 C 0
s Cercopithecus_hamlyni.k141_187466                          11644 18 -     27936 ---------------ac-----atctttgg-tgtc---agG----G
i Cercopithecus_hamlyni.k141_187466                      I 2 C 0
s Cercopithecus_lowei.k141_1854285                             519 18 -     17152 ---------------ac-----atctttgg-tgtc---agG----G
i Cercopithecus_lowei.k141_1854285                       I 5 C 0
s Cercopithecus_albogularis.ctg5                                38814049 18 +  39242232 ---------------ac-----atctttgg-tgtc---agG----G
i Cercopithecus_albogularis.ctg5                               I 2 C 0
s Cercopithecus_mona.ctg39                                21219748 18 -  21565898 ---------------ac-----atctttgg-tgtc---agG----G
i Cercopithecus_mona.ctg39                               I 5 C 0
s Cercopithecus_neglectus.k141_2526306                       36867 18 -     53127 ---------------ac-----atctttgg-tgtc---agG----G
i Cercopithecus_neglectus.k141_2526306                   I 5 C 0
s Cercopithecus_nictitans.k141_3278028                        4150 18 +      7159 ---------------ac-----atctttgg-tgtc---agG----G
i Cercopithecus_nictitans.k141_3278028                   I 2 C 0
s Cercopithecus_petaurista.k141_807961                       11670 18 -     27947 ---------------ac-----atctttgg-tgtc---agG----G
i Cercopithecus_petaurista.k141_807961                   I 5 C 0
s Cercopithecus_pogonias.k141_822820                         11643 18 +     17596 ---------------ac-----atctttgg-tgtc---agG----G
i Cercopithecus_pogonias.k141_822820                     I 5 C 0
s Cercopithecus_roloway.k141_2567858                           865 18 +     26000 ---------------AT-----ATCTTTGG-TGTC---AGG----G
i Cercopithecus_roloway.k141_2567858                     I 2 C 0
s Cheirogaleus_major.k141_333249                             18776 10 -     52598 ac-----ac-c----aT-----GTA---------------------
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           14121 10 +     57038 ac-----ac-c----aT-----GTA---------------------
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           8036 23 +     11226 gt-----ac-c----ac-----atctttgg-tgtc--g--gG---G
i Chiropotes_albinasus.k141_2813271                      C 0 I 1
s Chlorocebus_aethiops.ctg25                              18425608 18 -  18827391 ---------------ac-----atctttgg-tgtc---agG----G
i Chlorocebus_aethiops.ctg25                             I 5 C 0
s Chlorocebus_pygerythrus.k141_1025673                       12046 18 -     50209 ---------------AT-----ATCTTTGG-TGTC---AGG----G
i Chlorocebus_pygerythrus.k141_1025673                   I 2 C 0
s Chlorocebus_sabaeus.CM001947.1                         135419052 18 + 135778131 ---------------AT-----ATCTTTGG-TGTC---AGG----G
i Chlorocebus_sabaeus.CM001947.1                         I 2 C 0
s Colobus_angolensis.KN981557.1                            1907564 24 +   2368649 AT-----AC-C----AC-----ATCTTTGG-tgtc---aggg---g
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199947236 24 + 200372422 at-----ac-c----ac-----atctttgg-tgtc---agGG---G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              34107 24 +     84244 at-----ac-c----ac-----atctttgg-tgtc---agGG---G
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          12085 27 -     20389 a-c----ac-c----ac-----atatttgg-GGGG---GTGGGGGG
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 4
s Cricetomys_gambianus.CriGam_scaffold_18520                 47725 17 +     63868 ----------------------ATATTTGA-TGCC---TAGG---G
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11665063 17 + 224834208 ----------------------atatttgg-tgtc---aaga---g
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             26566 24 -     87169 a-c----ac-c----at-----gtcttcaa-cgtc---agga---g
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    834830 24 +   1526836 A-----TAC-C----AT-----ATATTTGA-TATC---AAGG---G
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12534953 24 -  12879189 ac-----ac-a----at-----gtatttgg-tgtc---agGG---G
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  671364 23 +   1390856 a-c----ac-t----at-----acatttgg-tgtc---a-gg---g
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    4120 23 +    198055 a-c----ac-c----at-----acatttgg-tgtc---a-gG---G
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE759718.1                                   8606 24 +     11740 a-c----ac-c----ac-----atatttgg-tgtc---agGG---T
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          17251 17 -    110024 ----------------------gtatctgg-TATT---AAGA---G
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01109367.1                            3305 17 -      6299 ----------------------atatctgg-tatt---aaga---g
i Ellobius_talpinus.LOJH01109367.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16327398 24 -  41312741 a-c----ac-t----ac-----acattcga-ggtc---agga---g
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1281418 24 +   4378816 a-----tac-c----ac-----gtatttgg-tgtc---agGG---G
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18529239 24 -  39960074 a-----tac-c----ac-----gtatttgg-tgtc---agGG---G
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               31254 24 +    498745 a-----tac-c----ac-----gtatttgg-tgtc---agGG---G
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21202247 18 -  21539334 ---------------ac-----atctttgg-tgtc---agG----G
i Erythrocebus_patas.Contig38                            I 2 C 0
s Eulemur_albifrons.k141_342033                              11458 22 -     14127 ac-----ac-c----at-----gtatttgg-tgtc---TTT-----
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                4156 22 -     16928 ac-----ac-c----at-----gtatttgg-tgtc---TTT-----
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              13189 24 -     25546 ac-----ac-c----at-----gtatttgg-tgtc---agGG---G
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            10379 24 +     26330 ac-----ac-c----at-----gtatttgg-tgtc---agGG---G
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 11622 22 +     23973 ac-----ac-c----at-----gtatttgg-tgtc---TTT-----
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                10379 24 +     75513 ac-----ac-c----at-----gtatttgg-tgtc---agGG---G
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  8325 22 +     97555 ac-----ac-c----at-----gtatttgg-tgtc---TTT-----
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            11257 24 +     26496 ac-----ac-c----at-----gtatttgg-tgtc---agGG---A
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  1858 22 -     17153 ac-----ac-c----at-----gtatttgg-tgtc---TTT-----
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              11434 22 +    111500 ac-----ac-c----at-----gtatttgg-tgtc---TTT-----
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20235258 24 + 206538554 a-c----ac-c----ac-----attttcaa-cgtc---agaa---g
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20194102 24 + 205367284 a-c----ac-c----ac-----attttcaa-cgtc---agaa---g
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  7614 24 -     36744 a-c----ac-c----ac-----attttcaa-cgtc---agaa---g
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     423685 23 -    453645 AC-----AC-C----AA-----ATATTTGG-TGAC---AGGG----
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             1392 23 +     11339 AC-----AC-C----AA-----ATATTTGG-TGAC---AGGG----
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1959596                            5199 23 +      6795 ac-----ac-c----aa-----atatttgg-tgac---agGG----
i Galagoides_demidoff.k141_1959596                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_197845               1671 29 -      3123 atccaacac-c----at-----gtacttgg-tgtc---aggg---g
i Galeopterus_variegatus.GalVar_scaffold_197845          I 377 I 80
s Gorilla_beringei.k141_3596273                              13003 24 -     32273 at-----ac-c----ac-----atctttgg-tgtc---agGG---G
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186335151 24 + 186649187 at-----ac-c----ac-----atctttgg-tgtc---agGG---G
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   32187 24 +     78134 a-c----ac-c----at-----atatttgg-tgtc---aCAG---T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           4507 24 -     19426 ac-----ac-c----at-----gtatttgg-tgtc---agGG---G
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              9656 24 -     15286 ac-----ac-c----at-----gtatttgg-tgtc---agGG---G
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             11294 24 +     18253 ac-----ac-c----at-----gtatttgg-tgtc---agGG---G
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         11397 24 -     41752 ac-----ac-c----at-----gtatttgg-tgtc---agGG---G
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         11234 24 -     16460 ac-----ac-c----at-----gtatttgg-tgtc---agGG---G
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               240418 24 +    327341 A-----CAC-C----AT-----GTTTTCAA-CATC---AGGA---G
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       109901 24 +   1711038 a-c----ac-c----ac-----atatttga-tgcc---ggGG---G
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               41323 24 +     43066 a-c----ac-c----ac-----atatttga-tgtc---aAGG---G
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    431818 24 +    630532 at-----ac-c----ac-----acgtttgg-tgtc---agag---g
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  42545 24 +     55795 a-c----ac-c----ac-----gttttcaa-tctc---agga---g
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_307679                               14752 24 -     15490 at-----ac-c----ac-----atctttgg-tgtc---agag---g
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              56758 24 +     67168 at-----ac-c----ac-----atctttgg-tgtc---agag---g
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189540408 24 - 191637585 at-----ac-c----ac-----atctttgg-tgtc---agag---g
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3333302 24 -  11177569 at-----ac-c----ac-----atctttgg-tgtc---agag---g
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7517372 24 -   7955117 a-----tac-c----ac-----atacttag-tgcc---aAGG---G
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   20205 23 +     31101 ac-----ac-c----ac-----gtatttgg-ggtc---agGG----
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8276282 24 -   9596543 A-----TAC-C----AT-----ATATTTGG-TGTT---AGGG---A
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lemur_catta.scaffold_24                                 15521759 24 -  30322482 ac-----ac-c----at-----gtatttgg-tgtc---agGG---G
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        4753 22 +     64341 at-----ac-c----ac-----atctttgg-tgtc-----ag---G
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           1813 22 +      4941 at-----ac-c----ac-----atctttgg-tgtc-----ag---G
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4681 22 +     35603 gt-----ac-c----ac-----atctttgg-tgtT-----GG---G
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    26154 21 +     38576 -T-----AC-C----AC-----ATCTTTGG-TGTC-----GG---A
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         22851 21 +     66356 -T-----AC-C----AC-----ATCTTTGG-TGTC-----GG---A
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          8641 23 -     23766 at-----ac-t----at-----gtatttgc-tgtc---ggGG----
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             26588 23 +     45836 ac-----ac-c----at-----gtatttgg-tgtc---GAGG----
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_320948                           811 23 -      1719 ac-----ac-c----at-----gtatttgg-tgtc---agCG----
i Lepilemur_ruficaudatus.k141_320948                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      24643 23 +     54090 ac-----ac-c----at-----gtatttgg-tgtc---GAGG----
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.APMU01168965.1                       184 24 -      1094 a-c----ac-T----AC-----ATATTTGA-CGTC---AGGA---G
i Leptonychotes_weddellii.APMU01168965.1                 n 1020 C 0
s Lophocebus_aterrimus.ctg367                              1434174 23 +   1826925 at-----ac-c----ac-----atctttgg-tgtc---agG----G
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            3150 23 +     11245 AT-----AC-C----AA-----GGATTTGG-TAAC---AGGG----
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1001988 23 +   6120653 AT-----AC-C----AA-----GGATTTGG-TAAC---AGGG----
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17953336 24 -  59628241 g-c----ag-t----ac-----atattcga-catc---agga---g
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               3987 23 +     40492 at-----ac-c----ac-----atctttgg-tgtc---agG----G
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59673249 23 +  60120075 at-----ac-c----ac-----atctttgg-tgtc---agG----G
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  9743 23 -     26193 at-----ac-c----ac-----atctttgg-tgtc---agG----G
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            77547 23 -    114318 at-----ac-c----ac-----atctttgg-tgtc---agG----G
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  3254 23 -     23192 at-----ac-c----ac-----atctttgg-tgtc---agG----G
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                12706 23 -     29190 at-----ac-c----ac-----atctttgg-tgtc---agG----G
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  21274 23 +     37952 at-----ac-c----ac-----atctttgg-tgtc---agG----G
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186836362 23 + 187317192 AT-----AC-C----AC-----ATCTTTGG-TGTC---AGG----G
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25454925 23 -  25927173 AT-----AC-C----AC-----ATCTTTGG-TGTC---AGG----G
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  77123 23 +     89720 at-----ac-c----ac-----atctttgg-tgtc---agG----G
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 4120 23 +     20474 at-----ac-c----ac-----atctttgg-tgtc---agG----G
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   3922 23 -     14993 at-----ac-c----ac-----atctttgg-tgtc---agG----G
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  326792 23 -    668171 at-----ac-c----ac-----atctttgg-tgtc---agG----G
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 2232 23 -     24072 at-----ac-c----ac-----atctttgg-tgtc---agG----G
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               22861 23 -     45290 at-----ac-c----ac-----atctttgg-tgtc---agG----G
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88682 24 +     94391 a-c----ac-c----ac-----atatttgg-tgtc---aTTG---G
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23934448 23 -  24302211 at-----ac-c----ac-----atctttgg-tgtc---agG----G
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               348581 23 +    752769 at-----ac-c----ac-----atctttgg-tgtc---agG----G
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              17534 24 +    737560 a-c----at-g----aa-----gtattttg-tgtc---aggg---g
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              48919 24 -    317179 a-c----at-g----aa-----gtattttg-tgtc---aggg---g
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33099684 24 -  40650429 a-----tac-c----ac-----atatttag-tgcc---aAGG---G
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         8436 24 -    207569 a-c----ac-c----ac-----atattctg-tgtc---ggGG---G
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 12
s Mellivora_capensis.MelCap_flattened_line_69365              8114 24 +     13704 a-c----ac-t----ac-----atattcaa-ggtc---agga---g
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 29651 17 +    140813 ----------------------ATATCTGA-TGTC---AAGA---G
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12180122 17 -  29670104 ----------------------ATATTTGG-TGTC---AAGA---G
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                2940 19 -      7380 AT-----CC-C----AC-----ATCTTTGG-TGTC-----------
i Mico_argentatus.k141_1239457                           C 0 I 1
s Mico_humeralifer.k141_1976199                               2006 19 +     18990 AT-----CC-C----AC-----ATCTTTGG-TGTC-----------
i Mico_humeralifer.k141_1976199                          C 0 I 1
s Mico_schneideri.k141_1950671                                      2945 19 -      7356 AT-----CC-C----AC-----ATCTTTGG-TGTC-----------
i Mico_schneideri.k141_1950671                                 C 0 I 1
s Microcebus_murinus.CM007674.1                           18289148 22 -  93316391 AC-----AC-T----GT-----GTATTTAG-TGTC---A-TG----
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11257761 17 -  27267610 ----------------------atatctgg-tatt---aaga---g
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miopithecus_ogouensis.k141_534055                           6173 18 -     28506 ---------------ac-----atctttgg-tgtc---agG----G
i Miopithecus_ogouensis.k141_534055                      I 2 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         3598 24 -      8324 A-----CAC-T----AC-----ATATTTGA-CGTC---AGGA---G
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 216 C 0
s Mirza_zaza.k141_952172                                      6720 22 -     37649 ac-----ac-c----gt-----gtatttag-cgtc---a-TG----
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 139392 17 -    366855 a-c----gc-c----ac-----aGG-------GGT---AGG----A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   33524 24 +     37127 a-c----ac-c----at-----gttttcaa-cgtc---agga---g
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Mus_caroli.LT608237.1                                   84358736 17 - 120012414 ----------------------atatttga-tgtc---aagg---g
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87647725 17 - 129401213 ----------------------atatttga-tgtc---aagg---g
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31352011 17 -  89631738 ----------------------atatttga-tgcc---aagg---g
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90749803 17 - 130317789 ----------------------atatttGA-TGTC---AAGG---G
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              4463 24 +     14296 a-c----ac-t----at-----atattttg-tgta---agGG---G
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               299295 24 -  14710649 a-c----ac-t----ac-----acattcga-ggtc---agga---g
i Mustela_putorius.JH418006.1                            C 0 C 0
s Nasalis_larvatus.k141_413338                               12165 24 +     21681 at-----ac-c----ac-----atctttgg-tgtc---agGG---G
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    757968 24 +    783361 G-----CAC-C----AC-----ATATTTGG-AATC---AGGA---G
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9147596 23 -   9404916 g-c----ag-t----ac-----atatttga-catc---agga----
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102576924 23 - 196305487 ac-----ac-c----aa-----agatttgg-tgac---agGG----
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             4610 23 +      8486 ac-----ac-c----aa-----agatttgg-tgac---agGG----
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105747351 23 + 199412804 ac-----ac-c----aa-----agatttgg-tgac---agGG----
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1360727 27 +   3988456 a-----tgc-c----ac-----atGTTTGG-TGTTGAGAAGG---G
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              504686 24 -   2017862 a-c----ac-t----at-----atatttga-catc---agga---g
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   21877 17 +     28053 ----------------------atagttgg-tgtt---aaga---g
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    76953 17 +    102263 ----------------------ATATTTGG-TGTC---AAGA---G
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       460351 24 -    559221 g-c----ag-t----ac-----gtattcga-catc---agga---g
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         1227 23 +      8798 ac-----ac-c----aa-----atatttgg-tgac---aagg----
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             693394 23 -   1103335 AC-----AC-C----AA-----ATATTTGg-tgac---aagg----
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    41102 24 +     80009 AT-----AC-C----AC-----ATCTTTGG-TGTC---AGAG---G
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.KZ622849.1                                 19300 24 +    110857 AT-----AC-C----AC-----ATCTTTGG-TGTC---AGGG---G
i Pan_troglodytes.KZ622849.1                             I 507 I 901
s Panthera_onca.PanOnc_flattened_line_3271                  149266 24 +    230217 a-c----ac-c----gc-----attttcaa-cgtc---agaa---g
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                262473 24 +  18783137 a-c----ac-c----gc-----attttcaa-cgtc---agaa---g
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4719109 24 -   8748460 a-c----ac-c----gc-----attttcaa-cgtc---agaa---g
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183440203 23 + 183742232 AT-----AC-C----AC-----ATCTTTGG-TGTC---AGG----G
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             3896 22 +     20448 at-----ac-c----ac-----atctttgg-tgtc---a-g----G
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20560701 23 +  20919399 at-----ac-c----ac-----atctttgg-tgtc---agG----G
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   2639 23 +     41871 at-----ac-c----ac-----atctttgg-tgtc---agG----G
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     5925 23 +     27711 at-----ac-c----ac-----atctttgg-tgtc---agG----G
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  6004 23 +      9205 at-----ac-c----ac-----atctttgg-tgtc---agG----G
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10735 24 -     78924 a-c----ac-c----at-----gttttcaa-tgtc---agga---g
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            7371 27 +     13100 ac-----tc-agagaaA-----GAATTTGG-TGAC---AGGG----
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             5744 27 +     25941 ac-----tc-agagaaA-----GAATTTGG-TGAC---AGGG----
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18191552 17 -  18517816 ----------------------ATATTTGG-TGTC---AAGA---G
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Piliocolobus_badius.k141_1234363                           40680 24 +     62158 ac-----ac-c----ac-----atctttgg-tgtc---agGG---G
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        35402 24 +     89929 at-----ac-c----ac-----atctttgg-tgtc---agGG---G
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            36818 24 +     51399 at-----ac-c----ac-----atctttgg-tgtc---agGG---G
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14293056 24 -  14605196 AT-----AC-C----AC-----ATCTTTGG-tgtc---aggg---g
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189128127 24 + 189387572 AT-----AC-C----AC-----ATCTTTGg-tatc---aggg---g
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9567735 24 +   9816681 at-----ac-c----ac-----atctttgg-tatc---agGG---G
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               70329 24 -     81375 at-----ac-c----ac-----atctttgg-tgtc---agga---g
i Presbytis_comata.k141_677006                           C 0 I 1
s Presbytis_mitrata.k141_1087752                              2149 24 +     19060 at-----ac-c----ac-----atctttgg-tgtc---agga---g
i Presbytis_mitrata.k141_1087752                         C 0 I 1
s Prolemur_simus.MPIZ01000396.1                            2594410 24 -   4620579 AC-----AC-C----AT-----GTATTTGG-tgtc---aggg---g
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     988402 23 +   2598838 GC-----AC-C----AA-----GTATTTGG-TGTC---AGGG----
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          26712 23 +     38485 gc-----ac-c----aa-----gtatttgg-tgtc---agGG----
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             2873 23 +      4256 gc-----ac-c----ac-----gtatttga-tgtc---agGG----
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          24233 23 +     35766 gc-----ac-c----ac-----gtatttga-tgtc---agGG----
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           2415 23 -     24134 gc-----ac-c----ac-----gtatttga-tgtc---agGG----
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        26228 23 -     67325 gc-----ac-c----ac-----gtatttgg-tgtc---agGG----
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           2465 23 -      6182 gc-----ac-c----aa-----gtatttgg-tgtc---agGG----
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             7293 17 -     21651 ----------------------ATATTTGA-TGTC---AAGA---G
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            12784 16 -     21811 A-----CAC-C----AG-----AGA-------AGC---G-G----G
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         38307 24 +     42204 a-c----ac-t----ac-----acattcga-gatc---agga---g
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22974881 24 +  28871421 a-c----ac-c----ac-----atatttga-tgtc---agGG---G
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1357970 24 +   4952924 a-c----ac-c----ac-----atatttga-tgtc---agGG---G
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20272388 24 -  38429054 a-c----ac-c----ac-----attttcaa-cgtc---agaa---g
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             12163 24 -     91421 at-----ac-c----ac-----atctttgg-tgtc---agGG---G
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7606289 24 +   7812017 at-----ac-c----ac-----atctttgg-tgtc---agGG---G
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             12137 24 -     72585 at-----ac-c----ac-----atctttgg-tgtc---agGG---G
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53567807 17 +  90668790 ----------------------gtatttga-tgtc---aagg---g
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             3844 24 -     11128 at-----ac-c----ac-----atctttgg-tgtc---agGG---G
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91233199 24 - 195417433 AT-----AC-C----AC-----ATCTTTGG-TGTC---AGGG---G
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7668848 24 +   7961872 at-----ac-c----ac-----atctttgg-tgtc---agGG---G
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85874 24 -     96226 a-c----ac-c----ac-----atatttgg-tgtc---agGG---G
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               5061 22 -      8359 gt-----ac-c----ac-----atctttgg-tgtc-----gg---G
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            11369 22 -     13588 gt-----ac-c----ac-----atctttgg-tgtc-----gg---G
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              5007 22 -      6207 gt-----ac-c----ac-----atctttgg-tgtc-----gg---G
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               10734 22 +     13640 gt-----ac-c----ac-----atctttgg-tgtc-----gg---G
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               5597 22 +      8564 gt-----ac-c----ac-----atctttag-tgtc-----gg---G
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209465874 22 + 209938924 gt-----ac-c----ac-----atctttgg-tgtT-----GG---G
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 5088 22 -      9399 gt-----ac-c----ac-----atctttgg-tgtc-----gg---G
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 2234 22 +      3421 gt-----ac-c----ac-----atctttgg-tgtc-----gg---G
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119948413 22 - 121099817 GT-----AC-C----AC-----ATCTTTGG-TGTC-----GG---G
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       20880 22 +     46362 gt-----ac-c----ac-----atctttgg-tgtc-----gg---G
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               20975 22 +     45824 gt-----ac-c----ac-----atctttgg-tgtc-----gg---G
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             37590 22 -     64574 gt-----ac-c----ac-----atctttgg-tgtc-----gg---G
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                                596 22 -     23631 gt-----ac-c----ac-----atctttgg-tgtc-----gg---G
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 20868 22 -     61129 gt-----ac-c----ac-----atctttgg-tgtc-----ag---G
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          16672 24 -     19888 at-----ac-c----ac-----atctttgg-tgtc---ggGG---A
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      23874 24 +     39453 at-----ac-c----ac-----atctttgg-tgtc---agGG---G
i Semnopithecus_hypoleucos.k141_1615806                  C 0 I 1
s Semnopithecus_johnii.k141_670120                            4400 24 +     27826 at-----ac-c----ac-----atctttgg-tgtc---agGG---G
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             3921 24 -     19483 at-----ac-c----ac-----atctttgg-tgtc---ggGG---A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      3983 24 +      7198 at-----ac-c----ac-----atctttgg-tgtc---ggGG---A
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         12243 24 +     15514 at-----ac-c----ac-----atctttgg-tgtc---agGG---G
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    10957 17 -     12148 ----------------------ATATTTGG-TATA---AAAA---G
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               1908 24 +   1910179 A-----TAC-C----AT-----ATATTTGA-TGTT---ATGG---G
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 1
s Spermophilus_dauricus.KZ294078.1                         1950456 25 -   3870691 a-----taccc----ac-----atacttag-tgcc---aAGG---G
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             28824 24 +     97271 a-c----ac-t----at-----gtattcga-cgtc---agga---g
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              16418 24 -    196729 A-----CAC-C----AT-----GTTTTCAA-CATC---AGGA---G
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.JH118708.1                                      33332 25 -     47482 a-c----ac-c----ac-----atatttgatgacc---agga---g
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1090450 24 -   1523678 at-----ac-c----ac-----atctttgg-tgtc---agag---g
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 8726 25 +     41958 A-----CTC-C----ACTATTT------GG-AGTC---AGGG-AAG
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      116839 24 -    156842 a-c----ac-c----at-----atatctgg-tgTG---AAGG---G
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    385292 24 +    539355 a---a--ac-c----at-----acatctgg-tatc---aAGG---G
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               23768 24 +     70052 ac-----ac-c----ac-----atatttgg-tgtt---agGG---G
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_2029956                               3113 24 +      4644 ac-----ac-c----ac-----atatttgg-tgtt---agGG---G
i Tarsius_wallacei.k141_2029956                          C 0 C 0
s Theropithecus_gelada.CM009954.1                        186425568 23 + 186847797 AT-----AC-C----AC-----ATCTTTGG-TGTC---AGG----G
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          7973 24 -     20410 at-----ac-c----ac-----atctttgg-tgtc---agGG---G
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    12168 24 +     15221 at-----ac-c----ac-----atctttgg-tgtc---agGG---G
i Trachypithecus_crepusculus.k141_1194022                C 0 I 1
s Trachypithecus_cristatus.k141_580354                        8074 24 +     19930 at-----ac-c----ac-----atctttgg-tgtc---agGG---G
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       4504 24 -     19997 at-----ac-c----ac-----atctttgg-tgtc---agGG---G
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            44624 24 -     60166 at-----ac-c----ac-----atctttgg-tgtc---agGG---G
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        12095 24 -     27529 at-----ac-c----ac-----atctttgg-tgtc---agGG---G
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     12037 24 -     18194 at-----ac-c----ac-----atctttgg-tgtc---agGG---G
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           5771 24 -     21137 at-----ac-c----ac-----atctttgg-tgtc---agGG---G
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    4474 24 -     10723 at-----ac-c----ac-----atctttgg-tgtc---agGG---G
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         3626 24 +      9834 at-----ac-c----ac-----atctttgg-tgtc---agGG---G
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        21941 24 +     32220 at-----ac-c----ac-----atctttgg-tgtc---agGG---G
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5936041 24 +   6242583 at-----ac-c----ac-----atctttgg-tgtc---agGG---G
i Trachypithecus_phayrei.ctg124                          C 0 I 1
s Trachypithecus_pileatus.k141_2007326                        5289 24 +     20839 at-----ac-c----ac-----atctttgg-tgtc---agGG---G
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2152524 24 +   4065304 g-c----ac-c----ag-----gtatttgg-tgtc---agGG---A
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     5837 24 -     10553 A-----CAC-C----AG-----GTATTTGA-TGTC---AGGG---A
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4848542 24 -   5085361 a-c----ac-t----ac-----atatttga-cgtc---ggga---g
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   9093 24 +     50397 ac-----at-c----at-----atatttgg-tggc---agGG---G
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              9147 24 +     24756 ac-----at-c----at-----gtatttgg-tggc---agGG---G
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5370006 24 -   5488506 a-c----ac-a----ac-----atatttgg-tTTC---TGTG---G
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  9004 24 -     43706 g-c----ag-t----ac-----atattcga-catc---agga---g
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        21831 24 -     24430 a-----tac-c----ac-----atatttag-tgtc---agGG---G
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          3242 24 +     86975 a-c----ac-t----ac-----atatttga-catc---agga---g
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519  0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188  0 +      1777 C
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383  9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   2809  0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 70244  0 +    116680 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Oryctolagus_cuniculus.CM000791.1                        67144574 44 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186890  0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3730 44 -     14121 I
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            61949  0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Crocidura_indochinensis.CroInd_scaffold_287352              1624  0 +      4208 I
e Condylura_cristata.JH655891.1                           17547132  5 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            171068  0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15969  0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            5641  0 -      6351 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       3774 4 +     62944 G--G-AA
s Allenopithecus_nigroviridis.k141_3361533                   11693 3 -     52922 G--A-A-
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         11627 3 -     28001 G--A-A-
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          2073 3 -     18505 G--A-A-
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           2922 3 -     12518 G--A-A-
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                               525 2 -     27731 G--G---
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                 648 2 +      3134 G--G---
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                                786 2 -     45847 G--G---
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                21990 2 +     25266 G--G---
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           1174 2 +      2906 G--G---
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            15287 2 -     18578 G--G---
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                               676 2 +     47717 G--A---
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                              805 2 -      3544 G--G---
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             12024 2 +     50774 G--G---
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  12649 2 -     33861 g--a---
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            12670 2 -     34016 G--A---
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4295065 2 -   5030052 G--A---
i Aotus_nancymaae.KZ198451.1                             C 0 I 1
s Aotus_trivirgatus.k141_2152450                             12671 2 -     34685 g--a---
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               25792 2 -     47192 g--a---
i Aotus_vociferans.k141_344750                           C 0 C 0
s Arctocebus_calabarensis.k141_2318572                        8180 2 +     14667 ---A-A-
i Arctocebus_calabarensis.k141_2318572                   C 0 I 1
s Avahi_laniger.k141_765380                                  51371 3 -     92717 A--A-A-
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              52000 3 +     85213 A--A-A-
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             2414 4 -     10423 GGAA---
i Callibella_humilis.k141_1278103                        I 1 C 0
s Callimico_goeldii.k141_1091182                             21911 4 +     31915 GGAA---
i Callimico_goeldii.k141_1091182                         I 1 C 0
s Callithrix_geoffroyi.k119_512088                            2384 4 +      5267 GGAA---
i Callithrix_geoffroyi.k119_512088                       I 1 C 0
s Callithrix_jacchus.pat_scaffold_3                       23587597 4 - 189096842 GGAA---
i Callithrix_jacchus.pat_scaffold_3                      I 1 I 1
s Callithrix_kuhlii.k119_1164682                              9128 4 -     12001 GGAA---
i Callithrix_kuhlii.k119_1164682                         I 1 C 0
s Carlito_syrichta.NW_007259797.1                           153685 3 -    496798 a--a-a-
i Carlito_syrichta.NW_007259797.1                        C 0 I 2
s Cebuella_niveiventris.k141_1251222                          7038 4 -     11392 GGAA---
i Cebuella_niveiventris.k141_1251222                     I 1 C 0
s Cebuella_pygmaea.k141_1309012                               3136 4 -      7577 GGAA---
i Cebuella_pygmaea.k141_1309012                          I 1 C 0
s Cephalopachus_bancanus.k141_1423433                         3184 3 +     31688 A--A-A-
i Cephalopachus_bancanus.k141_1423433                    C 0 I 2
s Cercocebus_atys.KQ010504.1                               4472652 3 +   4669795 G--A-A-
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        11199 3 -     19203 G--A-A-
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           5621 3 +      8260 G--A-A-
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           5848 3 +     27781 G--A-A-
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         6004 3 -     20310 G--A-A-
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           8985 3 +     29689 G--A-A-
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            3413 3 +      9989 G--A-A-
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          11662 3 -     27936 G--A-A-
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                             537 3 -     17152 G--A-A-
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38814067 3 +  39242232 G--A-A-
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21219766 3 -  21565898 G--A-A-
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       36885 3 -     53127 G--A-A-
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        4168 3 +      7159 G--A-A-
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       11688 3 -     27947 G--A-A-
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         11661 3 +     17596 G--A-A-
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                           883 3 +     26000 G--A-A-
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             18786 2 -     52598 ---A-A-
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           14131 2 +     57038 ---A-A-
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           8060 1 +     11226 -----A-
i Chiropotes_albinasus.k141_2813271                      I 1 C 0
s Chlorocebus_aethiops.ctg25                              18425626 3 -  18827391 G--A-A-
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       12064 3 -     50209 G--A-A-
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135419070 3 + 135778131 G--A-A-
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1907588 3 +   2368649 a--a-a-
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199947260 3 + 200372422 A--A-A-
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              34131 3 +     84244 A--A-A-
i Colobus_polykomos.k141_906115                          C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12534977 3 -  12879189 A--A-A-
i Daubentonia_madagascariensis.ctg71                     C 0 I 1
s Erythrocebus_patas.Contig38                             21202265 3 -  21539334 G--A-A-
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              11480 2 -     14127 ---A-A-
i Eulemur_albifrons.k141_342033                          C 0 I 2
s Eulemur_collaris.k141_377015                                4178 2 -     16928 ---A-A-
i Eulemur_collaris.k141_377015                           C 0 I 2
s Eulemur_coronatus.k141_885031                              13213 3 -     25546 A--A-A-
i Eulemur_coronatus.k141_885031                          C 0 I 2
s Eulemur_flavifrons.k141_1184614                            10403 3 +     26330 A--A-A-
i Eulemur_flavifrons.k141_1184614                        C 0 I 2
s Eulemur_fulvus.k141_544389                                 11644 2 +     23973 ---A-A-
i Eulemur_fulvus.k141_544389                             C 0 I 2
s Eulemur_macaco.k141_1562045                                10403 3 +     75513 A--A-A-
i Eulemur_macaco.k141_1562045                            C 0 I 2
s Eulemur_mongoz.k141_232305                                  8347 2 +     97555 ---A-A-
i Eulemur_mongoz.k141_232305                             C 0 I 2
s Eulemur_rubriventer.k141_571033                            11281 3 +     26496 A--A-A-
i Eulemur_rubriventer.k141_571033                        C 0 I 2
s Eulemur_rufus.k141_1476633                                  1880 2 -     17153 ---A-A-
i Eulemur_rufus.k141_1476633                             C 0 I 2
s Eulemur_sanfordi.k141_1122526                              11456 2 +    111500 ---A-A-
i Eulemur_sanfordi.k141_1122526                          C 0 I 2
s Galago_moholi.ctg2040                                     423708 2 -    453645 ---A-A-
i Galago_moholi.ctg2040                                  C 0 I 1
s Galago_senegalensis.k141_631886                             1415 2 +     11339 ---A-A-
i Galago_senegalensis.k141_631886                        C 0 I 1
s Galagoides_demidoff.k141_1959596                            5222 2 +      6795 ---A-A-
i Galagoides_demidoff.k141_1959596                       C 0 I 1
s Galeopterus_variegatus.GalVar_scaffold_266699               1944 3 +      2098 t--g-A-
i Galeopterus_variegatus.GalVar_scaffold_266699          I 29 I 1
s Gorilla_beringei.k141_3596273                              13027 4 -     32273 G--G-AA
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186335175 4 + 186649187 G--G-AA
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           4531 3 -     19426 A--A-A-
i Hapalemur_alaotrensis.k141_170648                      C 0 I 1
s Hapalemur_gilberti.k141_488810                              9680 3 -     15286 A--A-A-
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             11318 3 +     18253 A--A-A-
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         11421 3 -     41752 A--A-A-
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         11258 3 -     16460 A--A-A-
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Hoolock_leuconedys.ctg274                                    431842 3 +    630532 G--A-A-
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_307679                               14776 3 -     15490 G--A-A-
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              56782 3 +     67168 G--A-A-
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189540432 3 - 191637585 G--A-A-
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3333326 3 -  11177569 G--A-A-
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_3655594                                   20228 3 +     31101 A--A-A-
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15521783 3 -  30322482 G--A-A-
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        4775 4 +     64341 GGAA---
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           1835 4 +      4941 GGAA---
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4703 4 +     35603 GGAA---
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    26175 4 +     38576 GGAA---
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         22872 4 +     66356 GGAA---
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          8664 3 -     23766 A--A-A-
i Lepilemur_ankaranensis.k141_596936                     C 0 I 3
s Lepilemur_dorsalis.k141_577674                             26611 3 +     45836 A--A-A-
i Lepilemur_dorsalis.k141_577674                         C 0 I 3
s Lepilemur_ruficaudatus.k141_320948                           834 3 -      1719 G--G-A-
i Lepilemur_ruficaudatus.k141_320948                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      24666 3 +     54090 A--A-A-
i Lepilemur_septentrionalis.k141_185316                  C 0 I 3
s Lophocebus_aterrimus.ctg367                              1434197 3 +   1826925 G--A-A-
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            3173 2 +     11245 ---A-A-
i Loris_lydekkerianus.k141_2539221                       C 0 I 1
s Loris_tardigradus.ctg83                                  1002011 2 +   6120653 ---A-A-
i Loris_tardigradus.ctg83                                C 0 I 1
s Macaca_arctoides.k141_2326796                               4010 3 +     40492 G--A-A-
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59673272 3 +  60120075 G--A-A-
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  9766 3 -     26193 G--A-A-
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            77570 3 -    114318 G--A-A-
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  3277 3 -     23192 G--A-A-
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                12729 3 -     29190 G--A-A-
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  21297 3 +     37952 G--A-A-
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186836385 3 + 187317192 G--A-A-
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25454948 3 -  25927173 G--A-A-
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  77146 3 +     89720 G--A-A-
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 4143 3 +     20474 G--A-A-
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   3945 3 -     14993 G--A-A-
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  326815 3 -    668171 G--A-A-
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 2255 3 -     24072 G--A-A-
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               22884 3 -     45290 G--A-A-
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23934471 3 -  24302211 G--A-A-
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               348604 3 +    752769 G--A-A-
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Mico_argentatus.k141_1239457                                2960 4 -      7380 GGAA---
i Mico_argentatus.k141_1239457                           I 1 C 0
s Mico_humeralifer.k141_1976199                               2026 4 +     18990 GGAA---
i Mico_humeralifer.k141_1976199                          I 1 C 0
s Mico_schneideri.k141_1950671                                      2965 4 -      7356 GGAA---
i Mico_schneideri.k141_1950671                                 I 1 C 0
s Microcebus_murinus.CM007674.1                           18289170 2 -  93316391 ---A-A-
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_534055                           6191 3 -     28506 G--A-A-
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirza_zaza.k141_952172                                      6742 3 -     37649 A--A-A-
i Mirza_zaza.k141_952172                                 C 0 I 1
s Nasalis_larvatus.k141_413338                               12189 3 +     21681 A--A-A-
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nycticebus_bengalensis.LG01                            102576947 2 - 196305487 ---A-A-
i Nycticebus_bengalensis.LG01                            C 0 I 1
s Nycticebus_coucang.k141_5327727                             4633 2 +      8486 ---A-A-
i Nycticebus_coucang.k141_5327727                        C 0 I 1
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105747374 2 + 199412804 ---A-A-
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 1
s Otolemur_crassicaudatus.k141_222918                         1250 2 +      8798 ---a-a-
i Otolemur_crassicaudatus.k141_222918                    C 0 I 1
s Otolemur_garnettii.GL873799.1                             693417 2 -   1103335 ---a-a-
i Otolemur_garnettii.GL873799.1                          C 0 I 1
s Pan_paniscus.KQ411613.1                                    41126 4 +     80009 G--G-AA
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189140036 4 + 189151597 G--G-AA
i Pan_troglodytes.CM009242.2                             I 23 C 0
s Papio_anubis.CM001495.2                                183440226 3 + 183742232 G--A-A-
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             3918 3 +     20448 G--A-A-
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20560724 3 +  20919399 G--A-A-
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   2662 3 +     41871 G--A-A-
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     5948 3 +     27711 G--A-A-
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  6027 3 +      9205 G--A-A-
i Papio_ursinus.k141_3428135                             C 0 C 0
s Perodicticus_ibeanus.k141_855320                            7398 2 +     13100 ---A-A-
i Perodicticus_ibeanus.k141_855320                       C 0 I 1
s Perodicticus_potto.k141_1092580                             5771 2 +     25941 ---A-A-
i Perodicticus_potto.k141_1092580                        C 0 I 1
s Piliocolobus_badius.k141_1234363                           40704 3 +     62158 A--A-A-
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        35426 3 +     89929 A--A-A-
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            36842 3 +     51399 A--A-A-
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14293080 3 -  14605196 a--a-a-
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189128151 4 + 189387572 a--a-aa
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9567759 4 +   9816681 A--A-AA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               70354 1 -     81375 -----A-
i Presbytis_comata.k141_677006                           I 1 C 0
s Presbytis_mitrata.k141_1087752                              2174 1 +     19060 -----A-
i Presbytis_mitrata.k141_1087752                         I 1 C 0
s Prolemur_simus.MPIZ01000396.1                            2594434 3 -   4620579 a--a-a-
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     988425 3 +   2598838 A--A-A-
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          26735 3 +     38485 A--A-A-
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             2896 3 +      4256 A--A-A-
i Propithecus_diadema.k141_357118                        C 0 I 2
s Propithecus_edwardsi.k141_1176054                          24256 3 +     35766 A--A-A-
i Propithecus_edwardsi.k141_1176054                      C 0 I 2
s Propithecus_perrieri.k141_1200571                           2438 3 -     24134 A--A-A-
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        26251 3 -     67325 A--A-A-
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           2488 3 -      6182 A--A-A-
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pygathrix_cinerea.k141_1153803                             12187 3 -     91421 A--A-A-
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7606313 3 +   7812017 A--A-A-
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             12161 3 -     72585 A--A-A-
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             3868 3 -     11128 A--A-A-
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91233223 3 - 195417433 A--A-A-
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7668872 3 +   7961872 A--A-A-
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_2619299                               5083 4 -      8359 GGAA---
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            11391 4 -     13588 GGAA---
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              5029 4 -      6207 GGAA---
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               10756 4 +     13640 GGAA---
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               5619 4 +      8564 GGAA---
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209465896 4 + 209938924 GGAA---
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 5110 4 -      9399 GGAA---
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 2256 4 +      3421 GGAA---
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119948435 2 - 121099817 G--G---
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       20902 2 +     46362 G--G---
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               20997 2 +     45824 G--G---
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             37612 2 -     64574 G--G---
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                                618 2 -     23631 G--G---
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 20890 2 -     61129 G--G---
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          16696 3 -     19888 A--A-A-
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      23899 3 +     39453 A--A-A-
i Semnopithecus_hypoleucos.k141_1615806                  I 1 C 0
s Semnopithecus_johnii.k141_670120                            4424 4 +     27826 A--AAA-
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             3945 3 -     19483 A--A-A-
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      4007 3 +      7198 A--A-A-
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         12267 3 +     15514 A--A-A-
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1090474 3 -   1523678 G--A-A-
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_2201908                               23792 3 +     70052 A--A-A-
i Tarsius_lariang.k141_2201908                           C 0 I 2
s Tarsius_wallacei.k141_2029956                               3137 3 +      4644 A--A-A-
i Tarsius_wallacei.k141_2029956                          C 0 I 2
s Theropithecus_gelada.CM009954.1                        186425591 3 + 186847797 G--A-A-
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          7997 3 -     20410 A--A-A-
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    12193 1 +     15221 -----A-
i Trachypithecus_crepusculus.k141_1194022                I 1 C 0
s Trachypithecus_cristatus.k141_580354                        8098 3 +     19930 A--A-A-
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       4528 3 -     19997 A--A-A-
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            44648 3 -     60166 A--A-A-
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        12119 3 -     27529 A--A-A-
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     12061 3 -     18194 A--A-A-
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           5795 3 -     21137 A--A-A-
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    4498 3 -     10723 A--A-A-
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         3650 3 +      9834 A--A-A-
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        21965 3 +     32220 A--A-A-
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5936066 1 +   6242583 -----A-
i Trachypithecus_phayrei.ctg124                          I 1 C 0
s Trachypithecus_pileatus.k141_2007326                        5313 3 +     20839 A--A-A-
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Varecia_rubra.k141_590885                                   9117 3 +     50397 G--A-A-
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              9171 3 +     24756 G--A-A-
i Varecia_variegata.k141_1128296                         C 0 C 0
e Sapajus_macrocephalus.k141_351809                          54316 0 -     80660 C
e Sapajus_apella.ctg103                                    5419275 0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519 0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188 0 +      1777 C
e Cebus_albifrons.Contig27                                25650611 0 +  26074798 C
e Mus_pahari.LT608297.1                                   31352028 0 -  89631738 C
e Mus_spretus.CM004101.1                                  90749820 0 - 130317789 C
e Mus_musculus.chr8                                       87647742 0 - 129401213 C
e Mus_caroli.LT608237.1                                   84358753 0 - 120012414 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906 0 -     10935 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_17732          3266 0 +     86975 C
e Xerus_inauris.XerIna_scaffold_48378                        21855 0 -     24430 C
e Vulpes_lagopus.VulLag_flattened_line_30954                  9028 0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5370030 0 -   5488506 C
e Ursus_maritimus.KK499267.1                               4848566 0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383 9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     5861 0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2152548 0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553 7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   2809 0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937 0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    385316 0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      116863 0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 70244 0 +    116680 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                 8751 0 +     41958 C
e Sus_scrofa.JH118708.1                                      33357 0 -     47482 C
e Suricata_suricatta.SurSur_flattened_line_6629              16442 0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             28848 0 +     97271 C
e Spermophilus_dauricus.KZ294078.1                         1950481 0 -   3870691 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               1932 1 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    10974 0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                85898 0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rattus_norvegicus.chr16                                 53567824 0 +  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20272412 0 -  38429054 C
e Pteropus_vampyrus.KN525825.1                             1357994 0 +   4952924 C
e Pteropus_alecto.KB030862.1                              22974905 0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         38331 0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            12800 0 -     21811 C
e Psammomys_obesus.NESX01036370.1                             7310 0 -     21651 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10240 0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823 1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813 0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18191569 0 -  18517816 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10759 0 -     78924 C
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4719133 0 -   8748460 C
e Panthera_pardus.KV860321.1                                262497 0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  149290 0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       460375 0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                        67144574 44 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    76970 0 +    102263 C
e Ondatra_zibethicus.OndZib_scaffold_46174                   21894 0 +     28053 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              504710 0 -   2017862 C
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1360754 0 +   3988456 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9147619 0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    757992 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805 0 +       996 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186890 0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33016 1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456 1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390 1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692 1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               299319 0 -  14710649 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              4487 0 +     14296 C
e Murina_feae.MurFea_scaffold_85699                           5520 1 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   33548 0 +     37127 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 139409 0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         3622 0 -      8324 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686 0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11257778 0 -  27267610 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009 7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12180139 0 -  29670104 C
e Meriones_unguiculatus.MerUng_scaffold_7390                 29668 0 +    140813 C
e Mellivora_capensis.MelCap_flattened_line_69365              8138 0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                         8460 12 -    207569 I
e Marmota_marmota.CZRN01000018.1                          33099708 0 -  40650429 C
e Manis_pentadactyla.KN006162.1                              48943 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              17558 0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 88706 0 +     94391 C
e Lycaon_pictus.CM007581.1                                17953360 0 -  59628241 C
e Loxodonta_africana.GL010049.1                            4214777 0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3730 44 -     14121 I
e Leptonychotes_weddellii.APMU01168965.1                       208 0 -      1094 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276306 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Ictidomys_tridecemlineatus.JH393364.1                    7517396 0 -   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547 0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  42569 0 +     55795 C
e Hipposideros_galeritus.HipGal_scaffold_29171               41347 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       109925 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491 0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               240442 0 +    327341 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32211 0 +     78134 C
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  7638 0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20194126 0 + 205367284 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Equus_przewalskii.KK951119.1                               31278 0 +    498745 C
e Equus_caballus.CM000403.2                               18529263 0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1281442 0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2144447 1 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16327422 0 -  41312741 C
e Ellobius_talpinus.LOJH01109367.1                            3322 0 -      6299 C
e Ellobius_lutescens.LOEQ01008920.1                          17268 0 -    110024 C
e Elephantulus_edwardii.JH947257.1                         1089268 0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Eidolon_helvum.KE759718.1                                   8630 0 +     11740 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084 0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    4143 0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  671387 0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8628495 7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            61949 0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    834854 0 +   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129             26590 0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_287352              1624 0 +      4208 I
e Cricetulus_griseus.LT883664.1                           11665080 0 + 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_18520                 47742 0 +     63868 C
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          12112 4 -     20389 I
e Condylura_cristata.JH655891.1                           17547132 5 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            171068 0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15969 0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498 0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            5641 0 -      6351 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634            562 0 -     25243 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157 0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     90860 0 +    217609 C
e Castor_canadensis.CasCan_scaffold_2074                    135778 0 +    179628 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465 7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18498458 0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17957120 0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9032855 0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    183469 0 -    185531 C
e CanFam4.chr16                                           17797412 0 -  60362399 C
e Camelus_ferus.KB017975.1                                  401270 0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2332994 0 -   7040546 C
e Camelus_bactrianus.KN276810.1                           10000530 0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102 7 +     43469 I
e Aplodontia_rufa.AprRuf_scaffold_68852                       9342 0 +     20879 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691 7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     71669 0 -     89534 C
e Ailurus_fulgens.LNAC01001112.1                             77457 0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9508670 0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     68041 0 +     87051 C
e Acinonyx_jubatus.LLWD01001279.1                           825416 0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       3778 1 +     62944 T
s Acinonyx_jubatus.LLWD01001279.1                           825416 1 -   1699592 a
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     68041 1 +     87051 a
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     71669 1 -     89534 A
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   11696 1 -     52922 A
i Allenopithecus_nigroviridis.k141_3361533               C 0 I 1
s Allochrocebus_lhoesti.k141_4309873                         11630 1 -     28001 A
i Allochrocebus_lhoesti.k141_4309873                     C 0 I 1
s Allochrocebus_preussi.k141_1442296                          2076 1 -     18505 A
i Allochrocebus_preussi.k141_1442296                     C 0 I 1
s Allochrocebus_solatus.k141_166128                           2925 1 -     12518 A
i Allochrocebus_solatus.k141_166128                      C 0 I 1
s Aplodontia_rufa.AprRuf_scaffold_68852                       9342 1 +     20879 A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                        8183 1 +     14667 A
i Arctocebus_calabarensis.k141_2318572                   I 1 C 0
s Camelus_bactrianus.KN276810.1                           10000530 1 -  17673402 T
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2332994 1 -   7040546 T
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  401270 1 -   1652518 T
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17797412 1 -  60362399 A
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    183469 1 -    185531 A
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9032855 1 -   9314153 a
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17957120 1 -  59632846 a
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18498458 1 +  63665305 a
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           153690 1 -    496798 a
i Carlito_syrichta.NW_007259797.1                        I 2 C 0
s Castor_canadensis.CasCan_scaffold_2074                    135778 1 +    179628 A
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     90860 1 +    217609 G
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         3189 1 +     31688 A
i Cephalopachus_bancanus.k141_1423433                    I 2 C 0
s Ceratotherium_simum.JH767749.1                          12229535 1 +  27778364 a
i Ceratotherium_simum.JH767749.1                         C 0 I 6
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634            562 1 -     25243 A
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 I 6
s Cercocebus_atys.KQ010504.1                               4472655 1 +   4669795 A
i Cercocebus_atys.KQ010504.1                             C 0 I 1
s Cercocebus_chrysogaster.k141_393940                        11202 1 -     19203 A
i Cercocebus_chrysogaster.k141_393940                    C 0 I 1
s Cercocebus_lunulatus.k141_3846941                           5624 1 +      8260 A
i Cercocebus_lunulatus.k141_3846941                      C 0 I 1
s Cercocebus_torquatus.k141_3057011                           5851 1 +     27781 A
i Cercocebus_torquatus.k141_3057011                      C 0 I 1
s Cercopithecus_ascanius.k141_1024104                         6007 1 -     20310 A
i Cercopithecus_ascanius.k141_1024104                    C 0 I 1
s Cercopithecus_cephus.k141_1078548                           8988 1 +     29689 A
i Cercopithecus_cephus.k141_1078548                      C 0 I 1
s Cercopithecus_diana.k141_2427854                            3416 1 +      9989 A
i Cercopithecus_diana.k141_2427854                       C 0 I 1
s Cercopithecus_hamlyni.k141_187466                          11665 1 -     27936 A
i Cercopithecus_hamlyni.k141_187466                      C 0 I 1
s Cercopithecus_lowei.k141_1854285                             540 1 -     17152 A
i Cercopithecus_lowei.k141_1854285                       C 0 I 1
s Cercopithecus_albogularis.ctg5                                38814070 1 +  39242232 A
i Cercopithecus_albogularis.ctg5                               C 0 I 1
s Cercopithecus_mona.ctg39                                21219769 1 -  21565898 A
i Cercopithecus_mona.ctg39                               C 0 I 1
s Cercopithecus_neglectus.k141_2526306                       36888 1 -     53127 A
i Cercopithecus_neglectus.k141_2526306                   C 0 I 1
s Cercopithecus_nictitans.k141_3278028                        4171 1 +      7159 A
i Cercopithecus_nictitans.k141_3278028                   C 0 I 1
s Cercopithecus_petaurista.k141_807961                       11691 1 -     27947 A
i Cercopithecus_petaurista.k141_807961                   C 0 I 1
s Cercopithecus_pogonias.k141_822820                         11664 1 +     17596 A
i Cercopithecus_pogonias.k141_822820                     C 0 I 1
s Cercopithecus_roloway.k141_2567858                           886 1 +     26000 A
i Cercopithecus_roloway.k141_2567858                     C 0 I 1
s Chiropotes_albinasus.k141_2813271                           8061 1 +     11226 A
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18425629 1 -  18827391 A
i Chlorocebus_aethiops.ctg25                             C 0 I 1
s Chlorocebus_pygerythrus.k141_1025673                       12067 1 -     50209 A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 I 1
s Chlorocebus_sabaeus.CM001947.1                         135419073 1 + 135778131 A
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 1
s Colobus_angolensis.KN981557.1                            1907591 1 +   2368649 a
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199947263 1 + 200372422 A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              34134 1 +     84244 A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          12116 1 -     20389 C
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 4 I 13
s Cricetomys_gambianus.CriGam_scaffold_18520                 47742 1 +     63868 A
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11665080 1 + 224834208 A
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             26590 1 -     87169 A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    834854 1 +   1526836 A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 1
s Daubentonia_madagascariensis.ctg71                      12534981 1 -  12879189 A
i Daubentonia_madagascariensis.ctg71                     I 1 I 8
s Dicerorhinus_sumatrensis.PEKH010002091.1                  671387 1 +   1390856 a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 6
s Diceros_bicornis.DicBicMic_scaffold_5955                    4143 1 +    198055 A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 6
s Eidolon_helvum.KE759718.1                                   8630 1 +     11740 G
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          17268 1 -    110024 A
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01109367.1                            3322 1 -      6299 a
i Ellobius_talpinus.LOJH01109367.1                       C 0 C 0
s Equus_asinus.JREZ01000139.1                              1281442 1 +   4378816 A
i Equus_asinus.JREZ01000139.1                            C 0 I 5
s Equus_caballus.CM000403.2                               18529263 1 -  39960074 A
i Equus_caballus.CM000403.2                              C 0 I 5
s Equus_przewalskii.KK951119.1                               31278 1 +    498745 A
i Equus_przewalskii.KK951119.1                           C 0 I 5
s Erythrocebus_patas.Contig38                             21202268 1 -  21539334 A
i Erythrocebus_patas.Contig38                            C 0 I 1
s Felis_catus.CM001381.2                                  20235282 1 + 206538554 a
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20194126 1 + 205367284 a
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  7638 1 -     36744 A
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     423711 1 -    453645 A
i Galago_moholi.ctg2040                                  I 1 C 0
s Galago_senegalensis.k141_631886                             1418 1 +     11339 A
i Galago_senegalensis.k141_631886                        I 1 C 0
s Galagoides_demidoff.k141_1959596                            5225 1 +      6795 A
i Galagoides_demidoff.k141_1959596                       I 1 C 0
s Galeopterus_variegatus.GalVar_scaffold_266699               1948 1 +      2098 A
i Galeopterus_variegatus.GalVar_scaffold_266699          I 1 C 0
s Gorilla_beringei.k141_3596273                              13031 1 -     32273 T
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186335179 1 + 186649187 T
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   32211 1 +     78134 A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               240442 1 +    327341 A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       109925 1 +   1711038 G
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 10
s Hipposideros_galeritus.HipGal_scaffold_29171               41347 1 +     43066 G
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 I 11
s Hoolock_leuconedys.ctg274                                    431845 1 +    630532 A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  42569 1 +     55795 A
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_307679                               14779 1 -     15490 A
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              56785 1 +     67168 A
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189540435 1 - 191637585 A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3333329 1 -  11177569 A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7517396 1 -   7955117 A
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Jaculus_jaculus.JH725527.1                               8276306 1 -   9596543 A
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lophocebus_aterrimus.ctg367                              1434200 1 +   1826925 A
i Lophocebus_aterrimus.ctg367                            C 0 I 1
s Loris_lydekkerianus.k141_2539221                            3176 1 +     11245 A
i Loris_lydekkerianus.k141_2539221                       I 1 C 0
s Loris_tardigradus.ctg83                                  1002014 1 +   6120653 A
i Loris_tardigradus.ctg83                                I 1 C 0
s Lycaon_pictus.CM007581.1                                17953360 1 -  59628241 a
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               4013 1 +     40492 A
i Macaca_arctoides.k141_2326796                          C 0 I 1
s Macaca_assamensis.Contig5                               59673275 1 +  60120075 A
i Macaca_assamensis.Contig5                              C 0 I 1
s Macaca_cyclopis.k119_18836                                  9769 1 -     26193 A
i Macaca_cyclopis.k119_18836                             C 0 I 1
s Macaca_fascicularis.k141_814140                            77573 1 -    114318 A
i Macaca_fascicularis.k141_814140                        C 0 I 1
s Macaca_fuscata.k119_255327                                  3280 1 -     23192 A
i Macaca_fuscata.k119_255327                             C 0 I 1
s Macaca_leonina.k141_3550399                                12732 1 -     29190 A
i Macaca_leonina.k141_3550399                            C 0 I 1
s Macaca_maura.k141_2733130                                  21300 1 +     37952 A
i Macaca_maura.k141_2733130                              C 0 I 1
s Macaca_mulatta.NC_041758.1                             186836388 1 + 187317192 A
i Macaca_mulatta.NC_041758.1                             C 0 I 1
s Macaca_nemestrina.KQ007038.1                            25454951 1 -  25927173 A
i Macaca_nemestrina.KQ007038.1                           C 0 I 1
s Macaca_nigra.k141_1655396                                  77149 1 +     89720 A
i Macaca_nigra.k141_1655396                              C 0 I 1
s Macaca_radiata.k141_3680011                                 4146 1 +     20474 A
i Macaca_radiata.k141_3680011                            C 0 I 1
s Macaca_siberu.k141_635500                                   3948 1 -     14993 A
i Macaca_siberu.k141_635500                              C 0 I 1
s Macaca_silenus.Contig273                                  326818 1 -    668171 A
i Macaca_silenus.Contig273                               C 0 I 1
s Macaca_thibetana.k99_256239                                 2258 1 -     24072 A
i Macaca_thibetana.k99_256239                            C 0 I 1
s Macaca_tonkeana.k141_1498238                               22887 1 -     45290 A
i Macaca_tonkeana.k141_1498238                           C 0 I 1
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88706 1 +     94391 A
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23934474 1 -  24302211 A
i Mandrillus_leucophaeus.scaffold280                     C 0 I 1
s Mandrillus_sphinx.Contig270                               348607 1 +    752769 A
i Mandrillus_sphinx.Contig270                            C 0 I 1
s Manis_javanica.JSZB01003497.1                              17558 1 +    737560 a
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              48943 1 -    317179 a
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33099708 1 -  40650429 A
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 29668 1 +    140813 A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12180139 1 -  29670104 A
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11257778 1 -  27267610 a
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miopithecus_ogouensis.k141_534055                           6194 1 -     28506 A
i Miopithecus_ogouensis.k141_534055                      C 0 I 1
s Mormoops_blainvillei.MorMeg_scaffold_1417                 139409 1 -    366855 G
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 4
s Mungos_mungo.MunMun_flattened_line_23663                   33548 1 +     37127 A
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 9
s Mus_caroli.LT608237.1                                   84358753 1 - 120012414 a
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87647742 1 - 129401213 a
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31352028 1 -  89631738 a
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90749820 1 - 130317789 A
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              4487 1 +     14296 A
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Nasalis_larvatus.k141_413338                               12192 1 +     21681 A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    757992 1 +    783361 T
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 20
s Nyctereutes_procyonoides.CAJHUB010000658.1               9147619 1 -   9404916 a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102576950 1 - 196305487 A
i Nycticebus_bengalensis.LG01                            I 1 C 0
s Nycticebus_coucang.k141_5327727                             4636 1 +      8486 A
i Nycticebus_coucang.k141_5327727                        I 1 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105747377 1 + 199412804 A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 1 C 0
s Ochotona_princeps.JH802162.1                             1360754 1 +   3988456 G
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   21894 1 +     28053 a
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    76970 1 +    102263 A
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       460375 1 -    559221 a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 7
s Otolemur_crassicaudatus.k141_222918                         1253 1 +      8798 A
i Otolemur_crassicaudatus.k141_222918                    I 1 C 0
s Otolemur_garnettii.GL873799.1                             693420 1 -   1103335 a
i Otolemur_garnettii.GL873799.1                          I 1 C 0
s Pan_paniscus.KQ411613.1                                    41130 1 +     80009 T
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189140040 1 + 189151597 T
i Pan_troglodytes.CM009242.2                             C 0 I 34
s Panthera_onca.PanOnc_flattened_line_3271                  149290 1 +    230217 A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                262497 1 +  18783137 g
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4719133 1 -   8748460 a
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183440229 1 + 183742232 A
i Papio_anubis.CM001495.2                                C 0 I 1
s Papio_cynocephalus.k141_4307930                             3921 1 +     20448 A
i Papio_cynocephalus.k141_4307930                        C 0 I 1
s Papio_hamadryas.Contig39                                20560727 1 +  20919399 A
i Papio_hamadryas.Contig39                               C 0 I 1
s Papio_kindae.k141_1936966                                   2665 1 +     41871 A
i Papio_kindae.k141_1936966                              C 0 I 1
s Papio_papio.k141_802527                                     5951 1 +     27711 A
i Papio_papio.k141_802527                                C 0 I 1
s Papio_ursinus.k141_3428135                                  6030 1 +      9205 A
i Papio_ursinus.k141_3428135                             C 0 I 1
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10759 1 -     78924 A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 7
s Perodicticus_ibeanus.k141_855320                            7401 1 +     13100 A
i Perodicticus_ibeanus.k141_855320                       I 1 C 0
s Perodicticus_potto.k141_1092580                             5774 1 +     25941 A
i Perodicticus_potto.k141_1092580                        I 1 C 0
s Peromyscus_maniculatus.KI615324.1                       18191569 1 -  18517816 A
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Piliocolobus_badius.k141_1234363                           40707 1 +     62158 A
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        35429 1 +     89929 A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            36845 1 +     51399 A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14293083 1 -  14605196 a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189128155 1 + 189387572 a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9567763 1 +   9816681 A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               70355 1 -     81375 A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              2175 1 +     19060 A
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                             7310 1 -     21651 A
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            12800 1 -     21811 G
i Pteronotus_parnellii.KE909381.1                        C 0 I 4
s Pteropus_alecto.KB030862.1                              22974905 1 +  28871421 A
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1357994 1 +   4952924 A
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20272412 1 -  38429054 a
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             12190 1 -     91421 A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7606316 1 +   7812017 A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             12164 1 -     72585 A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53567824 1 +  90668790 a
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             3871 1 -     11128 A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91233226 1 - 195417433 A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7668875 1 +   7961872 A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85898 1 -     96226 A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Semnopithecus_entellus.k141_11662                          16699 1 -     19888 A
i Semnopithecus_entellus.k141_11662                      C 0 I 1
s Semnopithecus_hypoleucos.k141_1615806                      23902 1 +     39453 A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 I 1
s Semnopithecus_johnii.k141_670120                            4428 1 +     27826 A
i Semnopithecus_johnii.k141_670120                       C 0 I 1
s Semnopithecus_priam.k141_638794                             3948 1 -     19483 A
i Semnopithecus_priam.k141_638794                        C 0 I 1
s Semnopithecus_schistaceus.k141_1584426                      4010 1 +      7198 A
i Semnopithecus_schistaceus.k141_1584426                 C 0 I 1
s Semnopithecus_vetulus.k141_1200928                         12270 1 +     15514 A
i Semnopithecus_vetulus.k141_1200928                     C 0 I 1
s Sigmodon_hispidus.SigHis_scaffold_60841                    10974 1 -     12148 A
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               1933 1 +   1910179 A
i Solenodon_paradoxus.SolPar_flattened_line_126          I 1 C 0
s Spermophilus_dauricus.KZ294078.1                         1950481 1 -   3870691 A
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              16442 1 -    196729 A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 9
s Sus_scrofa.JH118708.1                                      33357 1 -     47482 G
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1090477 1 -   1523678 A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 8751 1 +     41958 A
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 2
s Tapirus_indicus.TapInd_scaffold_9301                      116863 1 -    156842 A
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 6
s Tapirus_terrestris.TapTer_scaffold_755                    385316 1 +    539355 G
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 6
s Tarsius_lariang.k141_2201908                               23797 1 +     70052 A
i Tarsius_lariang.k141_2201908                           I 2 C 0
s Tarsius_wallacei.k141_2029956                               3142 1 +      4644 A
i Tarsius_wallacei.k141_2029956                          I 2 C 0
s Theropithecus_gelada.CM009954.1                        186425594 1 + 186847797 A
i Theropithecus_gelada.CM009954.1                        C 0 I 1
s Trachypithecus_auratus.k141_722599                          8000 1 -     20410 A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    12194 1 +     15221 A
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        8101 1 +     19930 A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       4531 1 -     19997 A
i Trachypithecus_francoisi.k141_1412647                  C 0 I 1
s Trachypithecus_geei.k141_277701                            44651 1 -     60166 A
i Trachypithecus_geei.k141_277701                        C 0 I 1
s Trachypithecus_germaini.k141_912491                        12122 1 -     27529 A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     12064 1 -     18194 A
i Trachypithecus_hatinhensis.k141_143409                 C 0 I 1
s Trachypithecus_laotum.k141_907409                           5798 1 -     21137 A
i Trachypithecus_laotum.k141_907409                      C 0 I 1
s Trachypithecus_leucocephalus.k141_587342                    4501 1 -     10723 A
i Trachypithecus_leucocephalus.k141_587342               C 0 I 1
s Trachypithecus_melamera.k141_434728                         3653 1 +      9834 A
i Trachypithecus_melamera.k141_434728                    C 0 I 2
s Trachypithecus_obscurus.k141_190785                        21968 1 +     32220 A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5936067 1 +   6242583 A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        5316 1 +     20839 A
i Trachypithecus_pileatus.k141_2007326                   C 0 I 1
s Tupaia_chinensis.KB320699.1                              2152548 1 +   4065304 A
i Tupaia_chinensis.KB320699.1                            C 0 I 1
s Tupaia_tana.TupTan_flattened_line_97126                     5861 1 -     10553 A
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Vicugna_pacos.KN270157.1                                 5370030 1 -   5488506 T
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  9028 1 -     43706 A
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        21855 1 -     24430 A
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
e Sapajus_macrocephalus.k141_351809                          54316 0 -     80660 C
e Sapajus_apella.ctg103                                    5419275 0 -   5703754 C
e Saimiri_ustus.k141_1484609                                 20892 0 -     61129 C
e Saimiri_sciureus.k141_2278166                                620 0 -     23631 C
e Saimiri_oerstedii.k141_1487881                             37614 0 -     64574 C
e Saimiri_macrodon.k141_716185                               20999 0 +     45824 C
e Saimiri_cassiquiarensis.k141_2188234                       20904 0 +     46362 C
e Saimiri_boliviensis.NW_024100920.1                     119948437 0 - 121099817 C
e Saguinus_oedipus.k141_63850                                 2260 0 +      3421 C
e Saguinus_mystax.k141_374627                                 5114 0 -      9399 C
e Saguinus_midas.LG03                                    209465900 0 + 209938924 C
e Saguinus_labiatus.k141_285685                               5623 0 +      8564 C
e Saguinus_inustus.k141_699149                               10760 0 +     13640 C
e Saguinus_imperator.k141_717981                              5033 0 -      6207 C
e Saguinus_geoffroyi.k141_1413670                            11395 0 -     13588 C
e Saguinus_bicolor.k141_2619299                               5087 0 -      8359 C
e Mico_schneideri.k141_1950671                                      2969 0 -      7356 C
e Mico_humeralifer.k141_1976199                               2030 0 +     18990 C
e Mico_argentatus.k141_1239457                                2964 0 -      7380 C
e Leontopithecus_rosalia.k141_464620                         22876 0 +     66356 C
e Leontopithecus_chrysomelas.k141_1519602                    26179 0 +     38576 C
e Leontocebus_nigricollis.k141_4610752                        4707 0 +     35603 C
e Leontocebus_illigeri.k141_3350179                           1839 0 +      4941 C
e Leontocebus_fuscicollis.k141_1820339                        4779 0 +     64341 C
e Cebus_unicolor.k141_544048                                 48519 0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188 0 +      1777 C
e Cebus_albifrons.Contig27                                25650611 0 +  26074798 C
e Cebuella_pygmaea.k141_1309012                               3140 0 -      7577 C
e Cebuella_niveiventris.k141_1251222                          7042 0 -     11392 C
e Callithrix_kuhlii.k119_1164682                              9132 0 -     12001 C
e Callithrix_jacchus.pat_scaffold_3                       23587601 1 - 189096842 I
e Callithrix_geoffroyi.k119_512088                            2388 0 +      5267 C
e Callimico_goeldii.k141_1091182                             21915 0 +     31915 C
e Callibella_humilis.k141_1278103                             2418 0 -     10423 C
e Aotus_vociferans.k141_344750                               25794 0 -     47192 C
e Aotus_trivirgatus.k141_2152450                             12673 0 -     34685 C
e Aotus_nancymaae.KZ198451.1                               4295067 1 -   5030052 I
e Aotus_griseimembra.k141_2240599                            12672 0 -     34016 C
e Aotus_azarae.k141_3104676                                  12651 0 -     33861 C
e Alouatta_seniculus.k141_117119                             12026 0 +     50774 C
e Alouatta_puruensis.k141_1253230                              807 0 -      3544 C
e Alouatta_palliata.k141_2135620                               678 0 +     47717 C
e Alouatta_nigerrima.k141_3472759                            15289 0 -     18578 C
e Alouatta_macconnelli.k141_1406484                           1176 0 +      2906 C
e Alouatta_juara.k141_1509701                                21992 0 +     25266 C
e Alouatta_discolor.k141_743489                                788 0 -     45847 C
e Alouatta_caraya.k141_1743867                                 650 0 +      3134 C
e Alouatta_belzebul.k141_3238538                               527 0 -     27731 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906 0 -     10935 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_17732          3266 0 +     86975 C
e Varecia_variegata.k141_1128296                              9174 0 +     24756 C
e Varecia_rubra.k141_590885                                   9120 0 +     50397 C
e Ursus_maritimus.KK499267.1                               4848566 0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383 9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553 7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   2809 0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937 0 +    114563 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 70244 0 +    116680 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             28848 0 +     97271 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         38331 0 +     42204 C
e Propithecus_verreauxi.k141_956661                           2491 0 -      6182 C
e Propithecus_tattersalli.k141_790011                        26254 0 -     67325 C
e Propithecus_perrieri.k141_1200571                           2441 0 -     24134 C
e Propithecus_edwardsi.k141_1176054                          24259 2 +     35766 I
e Propithecus_diadema.k141_357118                             2899 2 +      4256 I
e Propithecus_coronatus.k141_347390                          26738 0 +     38485 C
e Propithecus_coquerelli.NW_012148875.1                     988428 0 +   2598838 C
e Prolemur_simus.MPIZ01000396.1                            2594437 0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10240 0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823 1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813 0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Oryctolagus_cuniculus.CM000791.1                        67144574 44 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              504710 0 -   2017862 C
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805 0 +       996 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186890 0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33016 1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456 1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390 1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692 1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               299319 0 -  14710649 C
e Murina_feae.MurFea_scaffold_85699                           5520 1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Mirza_zaza.k141_952172                                      6745 1 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         3622 0 -      8324 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686 0 +   8254450 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009 7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Microcebus_murinus.CM007674.1                           18289172 0 -  93316391 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Mellivora_capensis.MelCap_flattened_line_69365              8138 0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                         8460 12 -    207569 I
e Loxodonta_africana.GL010049.1                            4214777 0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3730 44 -     14121 I
e Leptonychotes_weddellii.APMU01168965.1                       208 0 -      1094 C
e Lepilemur_septentrionalis.k141_185316                      24669 3 +     54090 I
e Lepilemur_ruficaudatus.k141_320948                           837 0 -      1719 C
e Lepilemur_dorsalis.k141_577674                             26614 3 +     45836 I
e Lepilemur_ankaranensis.k141_596936                          8667 3 -     23766 I
e Lemur_catta.scaffold_24                                 15521786 0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Indri_indri.k141_3655594                                   20231 0 +     31101 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547 0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491 0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Hapalemur_occidentalis.k141_907772                         11261 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                         11424 0 -     41752 C
e Hapalemur_griseus.k141_1511508                             11321 0 +     18253 C
e Hapalemur_gilberti.k141_488810                              9683 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           4534 1 -     19426 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eulemur_sanfordi.k141_1122526                              11458 2 +    111500 I
e Eulemur_rufus.k141_1476633                                  1882 2 -     17153 I
e Eulemur_rubriventer.k141_571033                            11284 2 +     26496 I
e Eulemur_mongoz.k141_232305                                  8349 2 +     97555 I
e Eulemur_macaco.k141_1562045                                10406 2 +     75513 I
e Eulemur_fulvus.k141_544389                                 11646 2 +     23973 I
e Eulemur_flavifrons.k141_1184614                            10406 2 +     26330 I
e Eulemur_coronatus.k141_885031                              13216 2 -     25546 I
e Eulemur_collaris.k141_377015                                4180 2 -     16928 I
e Eulemur_albifrons.k141_342033                              11482 2 -     14127 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447 1 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16327422 0 -  41312741 C
e Elephantulus_edwardii.JH947257.1                         1089268 0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084 0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495 7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            61949 0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Crocidura_indochinensis.CroInd_scaffold_287352              1624 0 +      4208 I
e Condylura_cristata.JH655891.1                           17547132 5 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            171068 0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 15969 0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498 0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           14133 0 +     57038 C
e Cheirogaleus_major.k141_333249                             18788 0 -     52598 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            5641 0 -      6351 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157 0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465 7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              52003 0 +     85213 C
e Avahi_laniger.k141_765380                                  51374 0 -     92717 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102 7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691 7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Ailurus_fulgens.LNAC01001112.1                             77457 0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9508670 0 -  29979442 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       3779 34 +     62944 G-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
s Acinonyx_jubatus.LLWD01001279.1                           825417 36 -   1699592 a-a-a-------------aaaaa-----tctct--cagct-------ACA-TGA--ACT----TT-A----GC-----------AATT-----
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     68042 36 +     87051 a-a-a-----------------T-----GCTCT--CACCCGTATGT---A-TGA--ACTTTAATA-A----TC--------------------
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9508670 38 -  29979442 --A-AA----------G-A--AA-----CCTCTTGCAAGT-------ACA-TGA--ATT----TT-A----GC-----------AATT----C
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             77457 38 -    347723 --a-a-------------aaaaa-----ccttTTGCAACT-------TTG-TGA--ATT----TT-A----GC-----------ATTT----C
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     71670 36 -     89534 A-A-A-----------------T-----CTCCT--CCTAT--A-CACAAA-TGA--ACT----CA-GTTATTC--------------------
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   11698 34 -     52922 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Allenopithecus_nigroviridis.k141_3361533               I 1 C 0
s Allochrocebus_lhoesti.k141_4309873                         11632 34 -     28001 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Allochrocebus_lhoesti.k141_4309873                     I 1 C 0
s Allochrocebus_preussi.k141_1442296                          2078 34 -     18505 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Allochrocebus_preussi.k141_1442296                     I 1 C 0
s Allochrocebus_solatus.k141_166128                           2927 34 -     12518 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Allochrocebus_solatus.k141_166128                      I 1 C 0
s Alouatta_belzebul.k141_3238538                               527 39 -     27731 A-A-A-----------------AA---ACCTCG--TAACC--A-CATACA-TGA--ACT----TC-A----AC-----------AATT----C
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                 650 39 +      3134 A-A-A-----------------AA---ACCTCG--TAACC--A-CATACA-TGA--ACT----TC-A----AC-----------AATT----C
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                                788 39 -     45847 A-A-A-----------------AA---ACCTCG--TAACC--A-CATACA-TGA--ACT----TC-A----AC-----------AATT----C
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                21992 39 +     25266 A-A-A-----------------AA---ACCTTG--TAACC--A-CATACA-TGA--ACT----TC-A----AC-----------AATT----C
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           1176 39 +      2906 A-A-A-----------------AA---ACCTCG--TAACC--A-CATACA-TGA--ACT----TC-A----AC-----------AATT----C
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            15289 39 -     18578 A-A-A-----------------AA---ACCTCG--TAACC--A-CATACA-TGA--ACT----TC-A----AC-----------AATT----C
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                               678 37 +     47717 A-A-A-----------------A-----CCTCG--TAACC--A-CATACA-TGA--ACT----TC-C----AC-----------AATT----C
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                              807 39 -      3544 A-A-A-----------------AA---ACCTTG--TAACC--A-CATACA-TGA--ACT----TC-A----AC-----------AATT----C
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             12026 39 +     50774 A-A-A-----------------AA---ACCTTG--TAACC--A-GATACA-TGA--ACT----TT-A----AC-----------AATT----C
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  12651 37 -     33861 a-a-a-----------------a----acctca--t-acC--A-CATACA-TGA--ACT----TC-A----AC-----------AATT----C
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            12672 37 -     34016 A-A-A-----------------A----ACCTCA--T-ACC--A-CATACA-TGA--ACT----TC-A----AC-----------AATT----C
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4295068 37 -   5030052 A-A-A-----------------A----ACCTCA--T-ACC--A-CATACA-TGA--ACT----TC-A----AC-----------AATT----C
i Aotus_nancymaae.KZ198451.1                             I 1 C 0
s Aotus_trivirgatus.k141_2152450                             12673 37 -     34685 a-a-a-----------------a----acctca--t-acC--A-CATACA-TGA--ACT----TC-A----AC-----------AATT----C
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               25794 37 -     47192 a-a-a-----------------a----acctca--t-acC--A-CATACA-TGA--ACT----TC-A----AC-----------AATT----C
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       9343 32 +     20879 A-G-A-----------------A-----CCTCT--CAACC--A-CACACA-TGA--ATT----TT-A----AC--------------------
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                        8184 38 +     14667 A-A-A-----------------G----TTGTCT--CAACC--AT-ATAGAAGGA--ACT----TT-G----GC-----------AATT-----
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Avahi_laniger.k141_765380                                  51374 38 -     92717 A-A-A-----------------A----ACTTCT--TAACC--A-CACATA-AGA--ACT----TT-A----AC-----------AATT----C
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              52003 38 +     85213 A-A-A-----------------A----ACTTCT--TAACC--A-CACATA-AGA--ACT----TT-A----AC-----------AATT----C
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             2418 38 -     10423 A-A-A-----------------A----ACCTCG--TAACC--A-CATACA-TGA--GCT----TC-A----AC-----------AATT----C
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             21915 37 +     31915 --A-A-----------------A----GCCTCG--TAACC--A-CATACA-TGA--GCT----TC-A----AC-----------AATT----C
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            2388 38 +      5267 A-A-A-----------------A----ACCTCG--TAACC--A-CATACA-TGA--GCT----TC-A----AC-----------AATT----C
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23587602 38 - 189096842 A-A-A-----------------A----ACCTCG--TAACC--A-CATACA-TGA--GCT----TC-A----AT-----------AATT----C
i Callithrix_jacchus.pat_scaffold_3                      I 1 C 0
s Callithrix_kuhlii.k119_1164682                              9132 38 -     12001 A-A-A-----------------A----ACCTCG--TAACC--A-CATACA-TGA--GCT----TC-A----AC-----------AATT----C
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10000531 20 -  17673402 T-A-AAAAA-------------A-----CCTCT--CATCC-------AC--------------------------------------------
i Camelus_bactrianus.KN276810.1                          C 0 I 4
s Camelus_dromedarius.KN272107.1                           2332995 20 -   7040546 T-A-AAAAA-------------A-----CCTCT--CATCC-------AC--------------------------------------------
i Camelus_dromedarius.KN272107.1                         C 0 I 4
s Camelus_ferus.KB017975.1                                  401271 20 -   1652518 T-A-AAAAA-------------A-----CCTCT--CATCC-------AC--------------------------------------------
i Camelus_ferus.KB017975.1                               C 0 I 4
s CanFam4.chr16                                           17797413 39 -  60362399 A-A-AAAAA-------------A-----CCTCTTGTGACT-------ACA-TGA--ACT----TT-A----GG-----------AAAT----C
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    183470 39 -    185531 A-A-AAAAA-------------A-----CCTCTTGTGACT-------ACA-TGA--ACT----TT-A----GG-----------AAAT----C
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9032856 39 -   9314153 a-a-a-------------aaaaa-----cctcttgtgACT-------ACA-TGA--ACT----TT-A----GG-----------AAAT----C
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17957121 39 -  59632846 a-a-a-------------aaaaa-----cctcttgtgACT-------ACA-TGA--ACT----TT-A----GG-----------AAAT----C
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18498459 39 +  63665305 a-a-a-------------aaaaa-----cctcttgtgACT-------ACA-TGA--ACT----TT-A----GG-----------AAAT----C
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           153691 37 -    496798 a-a-a-----------------a----acctct--caaCC--A-CACATA-CGA--ATT----TT-A----GC-----------AATT-----
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    135779 32 +    179628 A-A-A-----------------A-----CCTTT--CAATC--A-CACATA-TGA--ACT----TT-A----AC--------------------
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 4
s Catagonus_wagneri.CatWag_scaffold_2839                     90861 26 +    217609 G-A-AAAAACTTATCTGCATTCT-----CCTGC------------------------------------------------------------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 259
s Cebuella_niveiventris.k141_1251222                          7042 38 -     11392 A-A-A-----------------A----ACCTCG--TAACC--A-CATACA-TGA--GCT----TC-A----AC-----------AATT----C
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               3140 38 -      7577 A-A-A-----------------A----ACCTCG--TAACC--A-CATACA-TGA--GCT----TC-A----AC-----------AATT----C
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         3190 37 +     31688 A-A-A-----------------A----ACCTCT--CAACC--A-CACATA-CGA--ATT----TT-A----GC-----------AATT-----
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12229542 30 +  27778364 ----------------------a-----cctct--caacc-------ACA-TGA--AGT----TT-A----AC-----------AATT----C
i Ceratotherium_simum.JH767749.1                         I 6 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634            569 30 -     25243 ----------------------A-----CCTCT--CAACC-------ACA-TGA--AGT----TT-A----AC-----------AATT----C
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 6 C 0
s Cercocebus_atys.KQ010504.1                               4472657 34 +   4669795 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Cercocebus_atys.KQ010504.1                             I 1 C 0
s Cercocebus_chrysogaster.k141_393940                        11204 34 -     19203 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Cercocebus_chrysogaster.k141_393940                    I 1 C 0
s Cercocebus_lunulatus.k141_3846941                           5626 34 +      8260 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Cercocebus_lunulatus.k141_3846941                      I 1 C 0
s Cercocebus_torquatus.k141_3057011                           5853 34 +     27781 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Cercocebus_torquatus.k141_3057011                      I 1 C 0
s Cercopithecus_ascanius.k141_1024104                         6009 34 -     20310 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Cercopithecus_ascanius.k141_1024104                    I 1 C 0
s Cercopithecus_cephus.k141_1078548                           8990 34 +     29689 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Cercopithecus_cephus.k141_1078548                      I 1 C 0
s Cercopithecus_diana.k141_2427854                            3418 34 +      9989 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Cercopithecus_diana.k141_2427854                       I 1 C 0
s Cercopithecus_hamlyni.k141_187466                          11667 34 -     27936 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Cercopithecus_hamlyni.k141_187466                      I 1 C 0
s Cercopithecus_lowei.k141_1854285                             542 34 -     17152 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Cercopithecus_lowei.k141_1854285                       I 1 C 0
s Cercopithecus_albogularis.ctg5                                38814072 34 +  39242232 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Cercopithecus_albogularis.ctg5                               I 1 C 0
s Cercopithecus_mona.ctg39                                21219771 34 -  21565898 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Cercopithecus_mona.ctg39                               I 1 C 0
s Cercopithecus_neglectus.k141_2526306                       36890 34 -     53127 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Cercopithecus_neglectus.k141_2526306                   I 1 C 0
s Cercopithecus_nictitans.k141_3278028                        4173 34 +      7159 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Cercopithecus_nictitans.k141_3278028                   I 1 C 0
s Cercopithecus_petaurista.k141_807961                       11693 34 -     27947 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Cercopithecus_petaurista.k141_807961                   I 1 C 0
s Cercopithecus_pogonias.k141_822820                         11666 34 +     17596 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Cercopithecus_pogonias.k141_822820                     I 1 C 0
s Cercopithecus_roloway.k141_2567858                           888 34 +     26000 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Cercopithecus_roloway.k141_2567858                     I 1 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            5641 34 -      6351 ----A-----------------A-----CTCTG--AAATG-------AGG-TAA--ACT-GAGTT-A----AC-----------AATT----A
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             18788 38 -     52598 A-A-A-----------------A----ACTTCT--TAACC--A-CACATA-GGA--ACT----TT-A----AC-----------AATT----C
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           14133 38 +     57038 A-A-A-----------------A----ACTTCT--TAACC--A-CACATA-GGA--ACT----TT-A----AC-----------AATT----C
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           8062 38 +     11226 A-G-A-----------------A----ACCTTG--TAACC--A-CATACA-TGA--GCT----TC-A----AC-----------AATT----C
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18425631 34 -  18827391 A-A-A-----------------A----ACGTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Chlorocebus_aethiops.ctg25                             I 1 C 0
s Chlorocebus_pygerythrus.k141_1025673                       12069 34 -     50209 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Chlorocebus_pygerythrus.k141_1025673                   I 1 C 0
s Chlorocebus_sabaeus.CM001947.1                         135419075 34 + 135778131 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Chlorocebus_sabaeus.CM001947.1                         I 1 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 15969 34 +     19366 ----A-----------------A-----CTTTG--AAATT-------AGG-TAA--ATT-GAGTA-A----AC-----------AATC----C
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            171068 34 +    839153 ----A-----------------A-----CTTTG--AAATT-------AGG-TAA--ATT-GAGTA-A----AC-----------AATC----C
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1907592 33 +   2368649 --a-a-----------------a----acctct--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199947264 33 + 200372422 --A-A-----------------A----ACCTCT--C-AGC------CACA-TGC--ACT----TC-A----AC-----------AATT----T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              34135 33 +     84244 --A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          12130 22 -     20389 -------------------------------------GTT-------ACG-TGA--ACT----TC-A----GC-----------AATT----C
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 13 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 47743 36 +     63868 A-A-A-----------------T-----GCTCT--CACCTGCATGC---A-TGA--ACTTTAATA-G----TC--------------------
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11665081 36 + 224834208 A-A-A-----------------T-----GCTCT--CACCTGCATGC---A-TGA--ACTTTAATA-A----TT--------------------
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             26591 38 -     87169 A-A-AAAAA---A---------A-----CCTTT--CAATT-------ACA-TGA--ACT----TT-A----GC-----------AATT----C
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 1
s Ctenodactylus_gundi.CteGun_scaffold_65                    834856 28 +   1526836 ----A-----------------A-----CATCT--CAATC--A-CAAACG-TAAGCATT----T-----------------------------
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 1 C 0
s Dasypus_novemcinctus.JH564415.1                            61949 34 +   2246927 ----A-----------------A-----CTTTG--AAATG-------AAG-TAA--ACT-GAGTA-A----AT-----------AATT----A
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12534990 36 -  12879189 ----A-----------------A----ACTTCT--TAACC--A-CACACA-GGA--ACT----TT-A----AC-----------AATT----C
i Daubentonia_madagascariensis.ctg71                     I 8 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  671394 30 +   1390856 ----------------------a-----cctct--caact-------ACA-TGA--AGT----TT-A----AC-----------AATT----C
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 6 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    4150 30 +    198055 ----------------------A-----CCTCT--CAACC-------ACA-TGA--AGT----TT-A----AC-----------AATT----C
i Diceros_bicornis.DicBicMic_scaffold_5955               I 6 C 0
s Eidolon_helvum.KE759718.1                                   8631 37 +     11740 C-A-AAAAA-------------A-----CCTCT--CAACT-------ACA-TGA--ACT----TG-A----AC-----------AATT----C
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          17269 36 -    110024 A-A-A-----------------T-----GCTCT--CACCTGCATGC---A-TGA--ACTTTAATA-A----TC--------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01109367.1                            3323 36 -      6299 a-a-a-----------------t-----gctct--cacCTGCATGC---A-TGA--ACTTTAATA-A----TC--------------------
i Ellobius_talpinus.LOJH01109367.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16327422 38 -  41312741 --A-AAAAA-------------A-----CCTCTTGCCAGT-------TTG-TGA--ATT----TT-A----GC-----------AATT----C
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1281448 30 +   4378816 ----------------------A-----CCTCT--CAACT-------ACA-TGA--ACT----TT-A----AC-----------AATT----C
i Equus_asinus.JREZ01000139.1                            I 5 C 0
s Equus_caballus.CM000403.2                               18529269 30 -  39960074 ----------------------A-----CCTCT--CAACT-------ACA-TGA--ACT----TT-A----AC-----------AATT----C
i Equus_caballus.CM000403.2                              I 5 C 0
s Equus_przewalskii.KK951119.1                               31284 30 +    498745 ----------------------A-----CCTCT--CAACT-------ACA-TGA--ACT----TT-A----AC-----------AATT----C
i Equus_przewalskii.KK951119.1                           I 5 C 0
s Erythrocebus_patas.Contig38                             21202270 34 -  21539334 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Erythrocebus_patas.Contig38                            I 1 C 0
s Eulemur_albifrons.k141_342033                              11484 36 -     14127 ----------------------AA---ACTTCT--TAACC--A-CACATA-GGA--ACT----TC-A----AC-----------AATT----C
i Eulemur_albifrons.k141_342033                          I 2 C 0
s Eulemur_collaris.k141_377015                                4182 36 -     16928 ----------------------AA---ACTTCT--TAACC--A-CACATA-GGA--ACT----TC-A----AC-----------AATT----C
i Eulemur_collaris.k141_377015                           I 2 C 0
s Eulemur_coronatus.k141_885031                              13218 36 -     25546 ----------------------A--T-ACTTCT--TAACC--A-CACATA-GGA--ACT----TC-A----AC-----------AATT----C
i Eulemur_coronatus.k141_885031                          I 2 C 0
s Eulemur_flavifrons.k141_1184614                            10408 36 +     26330 ----------------------AA---ACTTCT--TAACC--A-CACATA-GGA--ACT----TC-A----AC-----------AATT----C
i Eulemur_flavifrons.k141_1184614                        I 2 C 0
s Eulemur_fulvus.k141_544389                                 11648 36 +     23973 ----------------------AA---ACTTCT--TAACC--A-CACATA-GGA--ACT----TC-A----AC-----------AATT----C
i Eulemur_fulvus.k141_544389                             I 2 C 0
s Eulemur_macaco.k141_1562045                                10408 36 +     75513 ----------------------AA---ACTTCT--TAACC--A-CACATA-GGA--ACT----TC-A----AC-----------AATT----C
i Eulemur_macaco.k141_1562045                            I 2 C 0
s Eulemur_mongoz.k141_232305                                  8351 36 +     97555 ----------------------AA---ACTTCT--TAACC--A-CACATA-GGA--ACT----TC-A----AC-----------AATT----C
i Eulemur_mongoz.k141_232305                             I 2 C 0
s Eulemur_rubriventer.k141_571033                            11286 36 +     26496 ----------------------AA---ACTTCT--TAACC--A-CACATA-GGA--ACT----TC-A----AC-----------AATT----C
i Eulemur_rubriventer.k141_571033                        I 2 C 0
s Eulemur_rufus.k141_1476633                                  1884 36 -     17153 ----------------------AA---ACTTCT--TAACC--A-CACATA-GGA--ACT----TC-A----AC-----------AATT----C
i Eulemur_rufus.k141_1476633                             I 2 C 0
s Eulemur_sanfordi.k141_1122526                              11460 36 +    111500 ----------------------AA---ACTTCT--TAACC--A-CACATA-GGA--ACT----TC-A----AC-----------AATT----C
i Eulemur_sanfordi.k141_1122526                          I 2 C 0
s Felis_catus.CM001381.2                                  20235283 41 + 206538554 a-a-a--------aaaaaaaaaa-----cctct--cagct-------ACA-TGA--ACT----TT-A----GC-----------AATT-----
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20194127 40 + 205367284 a-a-a---------aaaaaaaaa-----cctct--cagct-------ACA-TGA--ACT----TT-A----GC-----------AATT-----
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  7639 42 -     36744 A-A-AAAAA---A-----AAAAAA----CCTCT--CAGCT-------ACA-TGA--ACT----TT-A----GC-----------AATT-----
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     423712 39 -    453645 A-A-A-----------------G----TCATCC--CAACC--A-CATACAAGGA--ACT----TT-G----AC-----------AATT----C
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             1419 39 +     11339 A-A-A-----------------G----TCATCC--CAACC--A-CATACAAGGA--ACT----TT-G----AC-----------AATT----C
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1959596                            5226 39 +      6795 A-A-A-----------------G----TTATCC--CAACC--AT-ATACAAGGA--ACT----TT-G----AC-----------AATT----C
i Galagoides_demidoff.k141_1959596                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_266699               1949 37 +      2098 A-A-A-----------------A-----CCTCT--TAACC--A-CACACA-TGA--GCT----TT-A----AC-----------AGTT----C
i Galeopterus_variegatus.GalVar_scaffold_266699          C 0 C 0
s Gorilla_beringei.k141_3596273                              13032 34 -     32273 G-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186335180 34 + 186649187 G-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   32212 32 +     78134 A-A-G-----------------A-----CTTCT--CAATC--A-CACACG-TGA--ATT----TT-A----AC--------------------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           4535 39 -     19426 A-A-A-----------------AA---ACTTCT--TAACC--A-CACATA-GGA--ACT----TC-A----AC-----------AATT----C
i Hapalemur_alaotrensis.k141_170648                      I 1 C 0
s Hapalemur_gilberti.k141_488810                              9683 40 -     15286 A-A-A-----------------AAA--ACTTCT--TAACC--A-CACATA-GGA--ACT----TC-A----AC-----------AATT----C
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             11321 41 +     18253 A-A-A-----------------AAA--ACTTCT--TAACC--A-CACATA-GGA--ACT----TCAA----AC-----------AATT----C
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         11424 39 -     41752 A-A-A-----------------AA---GCTTCT--TAACC--A-CACATA-GGA--ACT----TC-A----AC-----------AATT----C
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         11261 40 -     16460 A-A-A-----------------AAA--ACTTCT--TAACC--A-CACATA-GGA--ACT----TC-A----AC-----------AATT----C
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               240443 36 +    327341 A-A-AAAAA---A---------A-----AC--T--CAATT-------ACA-TGA--ATT----TT-T----GC-----------AATT----C
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 1
s Hipposideros_armiger.JXIK01000431.1                       109936 22 +   1711038 -------------------------------------GTT-------ACA-TAA--ACT----TT-A----AC-----------AATT----C
i Hipposideros_armiger.JXIK01000431.1                    I 10 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               41359 22 +     43066 -------------------------------------GTT-------ACA-TAA--ACT----TT-A----AC-----------AATT----C
i Hipposideros_galeritus.HipGal_scaffold_29171           I 11 C 0
s Hoolock_leuconedys.ctg274                                    431846 34 +    630532 A-A-A-----------------A----ACCTCC--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  42570 38 +     55795 A-A-AAAAA---A---------A-----CCTTC--CAATT-------ACA-TGA--ACT----TT-A----GC-----------AATT----C
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 1
s Hylobates_agilis.k141_307679                               14780 34 -     15490 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              56786 34 +     67168 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189540436 34 - 191637585 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3333330 34 -  11177569 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7517397 32 -   7955117 A-G-A-----------------A-----TCTCT--CAGAC--A-CATACA-TGA--ATT----TT-A----GC--------------------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   20231 38 +     31101 A-A-A-----------------A----ACTTCT--TAACT--A-CACATA-GGA--ATT----TT-A----AC-----------AATT----C
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8276307 36 -   9596543 A-A-T-----------------T-----CCTCT--CCTAT--A-CACAAA-TGA--ACT----CA-ATTATTC--------------------
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lemur_catta.scaffold_24                                 15521786 39 -  30322482 A-A-A-----------------AA---ACTTCT--TAACC--A-CACATA-GGA--ACT----TC-A----AC-----------AATT----C
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        4779 38 +     64341 A-G-A-----------------A----ACCTTG--TAACC--A-CATATA-TGA--GCT----TC-A----AC-----------AATT----C
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           1839 38 +      4941 A-G-A-----------------A----ACCTTG--TAACC--A-CATATA-TGA--GCT----TC-A----AC-----------AATT----C
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4707 38 +     35603 A-G-A-----------------A----ACCTTG--TAACC--A-CATATA-TGA--GCT----TC-A----AC-----------AATT----C
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    26179 38 +     38576 A-A-A-----------------A----ACCTCA--TAACC--ACG-TACA-TGA--GCT----TC-A----AC-----------AACT----C
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         22876 38 +     66356 A-A-A-----------------A----ACCTCG--TAACC--ACG-TACA-TGA--GCT----TC-A----AC-----------AACT----C
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          8670 34 -     23766 ---------------------------ACTTCT--TAACC--A-CATATA-GGT--ATT----TT-A----AC-----------AATT----C
i Lepilemur_ankaranensis.k141_596936                     I 3 C 0
s Lepilemur_dorsalis.k141_577674                             26617 34 +     45836 ---------------------------ACTTCT--TAACC--A-CATATA-GGT--ATT----TT-A----AC-----------AATT----C
i Lepilemur_dorsalis.k141_577674                         I 3 C 0
s Lepilemur_ruficaudatus.k141_320948                           837 38 -      1719 A-A-A-----------------A----ACTTCT--TAACC--A-CACACA-GGT--ATT----TT-A----AC-----------AATT----C
i Lepilemur_ruficaudatus.k141_320948                     C 0 I 4
s Lepilemur_septentrionalis.k141_185316                      24672 34 +     54090 ---------------------------ACTTCT--TAACC--A-CATATA-GGT--ATT----TT-A----AC-----------AATT----C
i Lepilemur_septentrionalis.k141_185316                  I 3 C 0
s Leptonychotes_weddellii.APMU01168965.1                       208 37 -      1094 --A-AAAAA-------------A-----CCTCTCGCAAAT-------ACA-TGA--ACT----TG-A----GC-----------AATT-----
i Leptonychotes_weddellii.APMU01168965.1                 C 0 C 0
s Lophocebus_aterrimus.ctg367                              1434202 34 +   1826925 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Lophocebus_aterrimus.ctg367                            I 1 C 0
s Loris_lydekkerianus.k141_2539221                            3177 39 +     11245 A-A-A-----------------G----TCATCT--CAACC--A-CATGGAAGGA--ACT----TT-G----AC-----------AATT----C
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1002015 39 +   6120653 A-A-A-----------------G----TCATCT--CAACC--A-CATGGAAGGA--ACT----TT-G----AC-----------AATT----C
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17953361 39 -  59628241 a-a-a-------------aaaaa-----cctcttgtgACT-------ACA-TGA--ACT----TT-A----GG-----------AAAT----C
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               4015 34 +     40492 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Macaca_arctoides.k141_2326796                          I 1 C 0
s Macaca_assamensis.Contig5                               59673277 34 +  60120075 A-A-A-----------------A----GCCTCT--C-AAC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Macaca_assamensis.Contig5                              I 1 C 0
s Macaca_cyclopis.k119_18836                                  9771 34 -     26193 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Macaca_cyclopis.k119_18836                             I 1 C 0
s Macaca_fascicularis.k141_814140                            77575 34 -    114318 A-A-A-----------------A----GCCTCT--C-AAC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Macaca_fascicularis.k141_814140                        I 1 C 0
s Macaca_fuscata.k119_255327                                  3282 34 -     23192 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Macaca_fuscata.k119_255327                             I 1 C 0
s Macaca_leonina.k141_3550399                                12734 34 -     29190 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Macaca_leonina.k141_3550399                            I 1 C 0
s Macaca_maura.k141_2733130                                  21302 34 +     37952 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Macaca_maura.k141_2733130                              I 1 C 0
s Macaca_mulatta.NC_041758.1                             186836390 34 + 187317192 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Macaca_mulatta.NC_041758.1                             I 1 C 0
s Macaca_nemestrina.KQ007038.1                            25454953 34 -  25927173 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Macaca_nemestrina.KQ007038.1                           I 1 C 0
s Macaca_nigra.k141_1655396                                  77151 34 +     89720 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Macaca_nigra.k141_1655396                              I 1 C 0
s Macaca_radiata.k141_3680011                                 4148 34 +     20474 A-A-A-----------------A----GCCTCT--C-AAC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Macaca_radiata.k141_3680011                            I 1 C 0
s Macaca_siberu.k141_635500                                   3950 34 -     14993 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Macaca_siberu.k141_635500                              I 1 C 0
s Macaca_silenus.Contig273                                  326820 34 -    668171 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Macaca_silenus.Contig273                               I 1 C 0
s Macaca_thibetana.k99_256239                                 2260 34 -     24072 A-A-A-----------------A----GCCTCT--C-AAC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Macaca_thibetana.k99_256239                            I 1 C 0
s Macaca_tonkeana.k141_1498238                               22889 34 -     45290 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Macaca_tonkeana.k141_1498238                           I 1 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88707 37 +     94391 C-A-AAAAA-------------A-----CCTCT--CAACT-------ACA-TGA--ACC----TG-A----AC-----------AATT----C
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23934476 34 -  24302211 A-A-A-----------------A----ACCTCT--C-AGC------CACA-CGA--ACT----TC-A----AC-----------AATT----T
i Mandrillus_leucophaeus.scaffold280                     I 1 C 0
s Mandrillus_sphinx.Contig270                               348609 34 +    752769 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Mandrillus_sphinx.Contig270                            I 1 C 0
s Manis_javanica.JSZB01003497.1                              17559 37 +    737560 a-a-a-------------aaaaa-----cctgg--taACT-------ACA-TGA--ACT----TT-A----AC-----------AATT----C
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              48944 38 -    317179 a-a-a------------aaaaaa-----cctgg--taaCT-------ACA-TGA--ACT----TT-A----AC-----------AATT----C
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33099709 32 -  40650429 A-G-A-----------------A-----TCTCT--CAGAC--A-CATACA-TGA--ATT----TT-A----GC--------------------
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         8472 22 -    207569 -------------------------------------GTT-------ACA-TGA--ACT----TT-A----AT-----------AATT----C
i Megaderma_lyra.MegLyr_scaffold_4542                    I 12 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              8138 38 +     13704 --A-AAAAA-------------A-----CCTCTTGCCAGT-------TCA-TGA--ATT----TT-A----GC-----------AATT----C
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 29669 36 +    140813 A-A-A-----------------T-----GCTCT--CACCTGGATGC---A-TGA--ACTTTAAGA-A----TC--------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12180140 37 -  29670104 AAA-A-----------------T-----GTTCT--CACCTACATGC---A-TGA--ACTTTAATA-A----TC--------------------
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                2964 38 -      7380 A-A-A-----------------A----ACCTCG--TAACC--A-CATACA-TGA--GCT----TC-A----AC-----------AATT----C
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               2030 38 +     18990 A-A-A-----------------A----ACCTCA--TAACC--A-CATACA-TGA--GCT----TC-A----AC-----------AATT----C
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      2969 38 -      7356 A-A-A-----------------A----ACCTCG--TAACC--A-CATACA-TGA--GCT----TC-A----AC-----------AATT----C
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18289172 38 -  93316391 A-A-A-----------------A----ACTTCT--TAACTGCA---CATA-GGA--ACT----TT-A----AC-----------AATT----C
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11257779 36 -  27267610 a-a-a-----------------T-----GCTCT--CTCCTGCATGC---A-TGA--ACTTTAATA-A----TC--------------------
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miopithecus_ogouensis.k141_534055                           6196 34 -     28506 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Miopithecus_ogouensis.k141_534055                      I 1 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         3622 37 -      8324 --A-AAAAA-------------A-----CCTCTCACAAAT-------ACA-TGA--ACT----TG-A----GC-----------AATT-----
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      6746 37 -     37649 --A-A-----------------A----ACTTCT--TAACTGCA---CGTA-GGA--ACT----TT-A----AC-----------AATT----C
i Mirza_zaza.k141_952172                                 I 1 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 139414 21 -    366855 ----------------------------TCTCT--CAACT-------ACA-TGA--ACT----TG----------------------------
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 4 I 8
s Mungos_mungo.MunMun_flattened_line_23663                   33558 28 +     37127 -----------------------------CTTT--CAATT-------ACA-TGA--ACT----TT-A----GC-----------AATT----C
i Mungos_mungo.MunMun_flattened_line_23663               I 9 I 1
s Mus_caroli.LT608237.1                                   84358754 36 - 120012414 a-a-a-----------------t-----gctct--cacCTGAATCC---A-TGA--ACTTTAATA-A----TC--------------------
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87647743 36 - 129401213 a-a-a-----------------t-----gctct--cacCTGAATCC---A-TGA--ACTTTAATA-A----TC--------------------
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31352029 36 -  89631738 a-a-a-----------------t-----gctct--cacCTGAATCC---A-TGA--ACTTTAATA-A----TC--------------------
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90749821 36 - 130317789 A-A-A-----------------T-----GCTCT--CACCTGAATCC---A-TGA--ACTTTAATA-A----TC--------------------
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              4488 36 +     14296 A-A-A-----------------AAATC-CCTCT--AAATC--A-CACATG-TGA--ACT----TT-A----AC--------------------
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               299319 38 -  14710649 --A-AAAAA-------------A-----CCTCTTGTCGGT-------TTG-TGA--ATT----TT-A----GC-----------AATT----C
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186890 34 +    196477 ----A-----------------A-----CTTTG--AAATA-------AAG-TAA--ACT-GAGTA-A----AC-----------AATT----C
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nasalis_larvatus.k141_413338                               12193 33 +     21681 --A-A-----------------A----ACCTCT--C-AGC------CACG-TGA--ACT----TC-A----AC-----------AATT----T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    758013 28 +    783361 -----------------------------CCTT--CAACT-------GCA-TAA--ACA----TG-G----AC-----------AATT----C
i Noctilio_leporinus.NocLep_scaffold_251                 I 20 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9147620 38 -   9404916 a-a-a-------------aaaaa-----cctct-gtgaCT-------ACA-TGA--ACT----TT-A----GG-----------AAAT----C
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102576951 39 - 196305487 A-A-A-----------------G----TCATCT--CAACC--A-CATAGAAGGA--ACT----TT-G----AC-----------AATT----C
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             4637 39 +      8486 A-A-A-----------------G----TCATCT--CAACC--A-CATAGAAGGA--ACT----TT-G----AC-----------AATT----C
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105747378 39 + 199412804 A-A-A-----------------G----TCATCT--CAACC--A-CATAGAAGGA--ACT----TT-G----AC-----------AATT----C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1360755 32 +   3988456 A-G-G-----------------G-----GATCT--CAACTGCA---TGCA-AGA--CCT----TT-A----GC--------------------
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              504710 37 -   2017862 --A-AAAAA-------------A-----CCTCTTGCAAAT-------ACA-TGA--ACT----TG-A----GC-----------AATT-----
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   21895 36 +     28053 a-a-a-----------------t-----gctct--cacctgcatGC---A-TGA--ACTTTAATA-A----TC--------------------
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    76971 36 +    102263 A-A-A-----------------T-----GCTCT--CACCTGCATGC---A-TGA--ACTTTAATA-A----TC--------------------
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       460383 31 -    559221 ----------------------------cctctTGTGACT-------ACA-TGA--ACT----TT-A----GG-----------AAAT----C
i Otocyon_megalotis.JAEUCK010005147.1                    I 7 C 0
s Otolemur_crassicaudatus.k141_222918                         1254 39 +      8798 A-A-A-----------------G----TCATCC--CAACC-T--CATACAAGGA--ACT----TT-G----AC-----------AATT----C
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             693421 39 -   1103335 a-a-a-----------------g----tcatcC--CAACC-T--CATACAAGGA--ACT----TT-G----AC-----------AATT----C
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    41131 34 +     80009 G-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03001836.1                             27055 34 +     51860 G-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Pan_troglodytes.NBAG03001836.1                         I 558 I 324
s Panthera_onca.PanOnc_flattened_line_3271                  149291 42 +    230217 A-A-AAAAA---A----AAAAAA-----CCTCT--CAGCT-------ACA-TGA--ACT----TT-A----GC-----------AATT-----
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                262498 40 +  18783137 a-a-a---------aaaaaaaaa-----cctct--cagct-------ACA-TGA--ACT----TT-A----GC-----------AATT-----
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4719134 41 -   8748460 a-a-a--------aaaaaaaaaa-----cctct--cagct-------ACA-TGA--ACT----TT-A----GC-----------AATT-----
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183440231 34 + 183742232 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Papio_anubis.CM001495.2                                I 1 C 0
s Papio_cynocephalus.k141_4307930                             3923 34 +     20448 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Papio_cynocephalus.k141_4307930                        I 1 C 0
s Papio_hamadryas.Contig39                                20560729 34 +  20919399 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Papio_hamadryas.Contig39                               I 1 C 0
s Papio_kindae.k141_1936966                                   2667 34 +     41871 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Papio_kindae.k141_1936966                              I 1 C 0
s Papio_papio.k141_802527                                     5953 34 +     27711 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Papio_papio.k141_802527                                I 1 C 0
s Papio_ursinus.k141_3428135                                  6032 34 +      9205 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Papio_ursinus.k141_3428135                             I 1 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10767 28 -     78924 -----------------------------CTCT--CAATT-------ACA-TGA--ACT----TT-A----GC-----------AATT----C
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 7 I 1
s Perodicticus_ibeanus.k141_855320                            7402 38 +     13100 A-A-A-----------------G----TTGTCT--CAACC--AT-ACAGAAGGA--ACT----TT-G----AC-----------AATT-----
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             5775 38 +     25941 A-A-A-----------------G----TTGTCT--CAACC--AT-ACAGAAGGA--ACT----TT-G----AC-----------AATT-----
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18191570 36 -  18517816 A-A-T-----------------C-----GCTCT--CACCTGCATGC---A-TGA--ACTTTAATA-A----TC--------------------
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Piliocolobus_badius.k141_1234363                           40708 33 +     62158 --A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        35430 33 +     89929 --A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            36846 33 +     51399 --A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14293084 33 -  14605196 --a-a-----------------a----acctct--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189128156 34 + 189387572 a-a-a-----------------a----acctct--c-agc------cACA-TGA--ACT----TC-A----AC-----------AATT----T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9567764 34 +   9816681 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               70356 33 -     81375 --A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              2176 33 +     19060 --A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2594437 38 -   4620579 a-a-a-----------------a----ccttct--TAGCC--A-CACATA-GGA--ACT----TC-A----AC-----------AATT----C
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     988428 38 +   2598838 A-A-A-----------------A----ACTTCT--TAACC--A-CACATA-AGA--ACT----TT-A----AC-----------AATT----C
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          26738 38 +     38485 A-A-A-----------------A----ACTTCT--TAACC--A-CACATA-AGA--ACT----TT-A----AC-----------AATT----C
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             2901 35 +      4256 ----------------------A----ACTTCT--TAACC--A-CACATA-AGA--ACT----TT-A----AC-----------AATT----C
i Propithecus_diadema.k141_357118                        I 2 C 0
s Propithecus_edwardsi.k141_1176054                          24261 35 +     35766 ----------------------A----ACTTCT--TAACC--A-CACATA-AGA--ACT----TT-A----AC-----------AATT----C
i Propithecus_edwardsi.k141_1176054                      I 2 C 0
s Propithecus_perrieri.k141_1200571                           2441 38 -     24134 A-A-A-----------------A----ACTTCT--TAACC--A-CACATA-AGA--ACT----TT-A----AC-----------AATT----C
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        26254 38 -     67325 A-A-A-----------------A----ACTTCT--TAACC--A-CACATA-AGA--ACT----TT-A----AC-----------AATT----C
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           2491 38 -      6182 A-A-A-----------------A----ACTTCT--TAACC--A-CACATA-AGA--ACT----TT-A----AC-----------AATT----C
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             7311 36 -     21651 A-A-A-----------------C-----GCTTT--CACCTGGATGC---A-TGA--ACTTTAAGA-A----TC--------------------
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            12805 21 -     21811 ----------------------------CCTCT--TAACT-------ACA-TGA--ACC----TG----------------------------
i Pteronotus_parnellii.KE909381.1                        I 4 I 8
s Pteronura_brasiliensis.PteBra_flattened_line_31117         38331 38 +     42204 --A-AAAAA-------------A-----CCTCTTGCCAGT-------TTG-TGA--ATT----TT-A----AC-----------AATT----C
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22974906 37 +  28871421 C-A-AAAAA-------------A-----CCTCT--CAACT-------ACA-TGG--ATT----TT-A----AC-----------AATT----C
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1357995 37 +   4952924 C-A-AAAAA-------------A-----CCTCT--CAACT-------ACA-TGG--ACT----TG-A----AC-----------AATT----C
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20272413 39 -  38429054 a-a-a----------aaaaaaaa-----cctct--cagct-------ACA-TGA--ACT----TT-A----GC-----------AATT-----
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             12191 33 -     91421 --A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7606317 33 +   7812017 --A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             12165 33 -     72585 --A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53567825 36 +  90668790 a-a-a-----------------t-----gctct--cacCTGAACGC---A-TGA--ACTTTAATA-A----TC--------------------
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             3872 33 -     11128 --A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------TATT----T
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91233227 33 - 195417433 --A-A-----------------C----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7668876 33 +   7961872 --A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------TATT----T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85899 37 -     96226 C-G-AAAAA-------------A-----CCTCT--CAACT-------ACA-Tga--aat----tg-a----ac-----------aatt----c
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               5087 38 -      8359 A-G-A-----------------A----ACCTTG--TAACC--A-CATACA-TGA--GCT----TC-A----AC-----------AATT----C
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            11395 38 -     13588 A-G-A-----------------A----ACCTTA--TAACC--A-CATACA-TGA--GCT----TC-A----AC-----------AATT----C
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              5033 38 -      6207 A-G-A-----------------A----ACCTTG--TAACC--A-CATACA-TGA--GCT----TC-A----AC-----------AATT----C
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               10760 38 +     13640 A-G-A-----------------A----ACCTTG--TAACC--A-CATACA-TGA--GCT----TC-A----AC-----------AATT----C
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               5623 38 +      8564 A-G-A-----------------A----ACCTTG--TAACC--A-CATACA-TGA--GCT----TC-A----AC-----------AATT----C
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209465900 38 + 209938924 A-G-A-----------------A----ACCTTG--TAACC--A-CATACA-TGA--GCT----TC-A----AC-----------AATT----C
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 5114 38 -      9399 A-G-A-----------------A----ACCTTG--TAACC--A-CATACA-TGA--GCT----TC-A----AC-----------AATT----C
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 2260 38 +      3421 A-G-A-----------------A----ACCTTA--TAACC--A-CATACA-TGA--GCT----TC-A----AC-----------AATT----C
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119948437 39 - 121099817 ACA-A-----------------A----ACCTCT--TAACC--A-CATACA-TGA--ACT----TC-A----AC-----------AATT----G
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       20904 39 +     46362 ACA-A-----------------A----ACCTCG--TAACC--A-CATACA-TGA--ACT----TC-A----AC-----------AATT----G
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               20999 39 +     45824 ACA-A-----------------A----ACCTCG--TAACC--A-CATACA-TGA--ACT----TC-A----AC-----------AATT----G
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             37614 39 -     64574 ACA-A-----------------A----ACCTCG--TAACC--A-CATACA-TGA--ACT----TC-A----AC-----------AATT----G
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                                620 39 -     23631 ACA-A-----------------A----ACCTCT--TAACC--A-CATACA-TGA--ACT----TC-A----AC-----------AATT----G
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 20892 39 -     61129 ACA-A-----------------A----ACCTCG--TAACC--A-CATACA-TGA--ACT----TC-A----AC-----------AATT----G
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          16701 31 -     19888 ----------------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Semnopithecus_entellus.k141_11662                      I 1 C 0
s Semnopithecus_hypoleucos.k141_1615806                      23904 31 +     39453 ----------------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Semnopithecus_hypoleucos.k141_1615806                  I 1 C 0
s Semnopithecus_johnii.k141_670120                            4430 31 +     27826 ----------------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Semnopithecus_johnii.k141_670120                       I 1 C 0
s Semnopithecus_priam.k141_638794                             3950 31 -     19483 ----------------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Semnopithecus_priam.k141_638794                        I 1 C 0
s Semnopithecus_schistaceus.k141_1584426                      4012 31 +      7198 ----------------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Semnopithecus_schistaceus.k141_1584426                 I 1 C 0
s Semnopithecus_vetulus.k141_1200928                         12272 31 +     15514 ----------------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Semnopithecus_vetulus.k141_1200928                     I 1 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    10975 36 -     12148 A-A-A-----------------T-----GTTCT--CACTTACATGC---A-TAA--ACTTTTATA-A----TC--------------------
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               1934 37 +   1910179 A-A-AAAA-C------------A-----CTTCT--CAACT-------CCA-TGA--ACT----TT-A----AT-----------AATC----C
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1950482 32 -   3870691 A-G-A-----------------A-----TCTCT--CAGAC--A-CATACA-TGA--ATT----TT-A----GC--------------------
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             28848 40 +     97271 --G-AAAAA---A-----A---A-----AACTTTGCAACT-------TCA-TGA--ATT----TT-A----GC-----------AATT----T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              16452 28 -    196729 -----------------------------CTTA--GAATT-------ACA-TGA--ACT----TT-A----GC-----------AATT----C
i Suricata_suricatta.SurSur_flattened_line_6629          I 9 I 1
s Sus_scrofa.JH118708.1                                      33358 26 -     47482 A-A-AGAAACTTATCTGCATACC-----CCTGC------------------------------------------------------------
i Sus_scrofa.JH118708.1                                  C 0 I 299
s Symphalangus_syndactylus.tarseq_199                      1090478 34 -   1523678 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 8754 30 +     41958 ----------------------A-----CTTCT--CAACT-------ACA-TGC--ACT----TG-A----AC-----------AATT----C
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 2 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 70244 34 +    116680 ----A-----------------A-----CTTTG--AAATA-------AGG-TAA--ACT-GAGTA-A----AC-----------AATT----C
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      116870 30 -    156842 ----------------------A-----CCTCT--CAACT-------ACG-TGA--ACC----TT-A----AC-----------AATT----C
i Tapirus_indicus.TapInd_scaffold_9301                   I 6 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    385323 30 +    539355 ----------------------A-----CCTCT--CAACT-------ACA-TGA--ATT----TT-A----AC-----------AATT----C
i Tapirus_terrestris.TapTer_scaffold_755                 I 6 C 0
s Tarsius_lariang.k141_2201908                               23798 38 +     70052 A-A-A-----------------A----ACCTCT--CAACC--A-CACATA-TGA--ATT----TT-A----GC-----------AATT----C
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_2029956                               3143 38 +      4644 A-A-A-----------------A----ACCTCT--CAACC--A-CACATA-TGA--ATT----TT-A----GC-----------AATT----C
i Tarsius_wallacei.k141_2029956                          C 0 C 0
s Theropithecus_gelada.CM009954.1                        186425596 34 + 186847797 A-A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Theropithecus_gelada.CM009954.1                        I 1 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   2809 34 +      8208 ----C-----------------A-----CTTTG--AAACG-------AGG-CAA--ACT-GAGTA-A----AC-----------AATT----A
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Trachypithecus_auratus.k141_722599                          8001 33 -     20410 --A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    12195 33 +     15221 --A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        8102 33 +     19930 --A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       4533 31 -     19997 ----------------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Trachypithecus_francoisi.k141_1412647                  I 1 C 0
s Trachypithecus_geei.k141_277701                            44653 31 -     60166 ----------------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Trachypithecus_geei.k141_277701                        I 1 C 0
s Trachypithecus_germaini.k141_912491                        12123 33 -     27529 --A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     12066 32 -     18194 ----------------------AA---ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Trachypithecus_hatinhensis.k141_143409                 I 1 C 0
s Trachypithecus_laotum.k141_907409                           5800 31 -     21137 ----------------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Trachypithecus_laotum.k141_907409                      I 1 C 0
s Trachypithecus_leucocephalus.k141_587342                    4503 31 -     10723 ----------------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Trachypithecus_leucocephalus.k141_587342               I 1 C 0
s Trachypithecus_melamera.k141_434728                         3656 30 +      9834 ---------------------------ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Trachypithecus_melamera.k141_434728                    I 2 C 0
s Trachypithecus_obscurus.k141_190785                        21969 33 +     32220 --A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5936068 33 +   6242583 --A-A-----------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        5318 31 +     20839 ----------------------A----ACCTCT--C-AGC------CACA-TGA--ACT----TC-A----AC-----------AATT----T
i Trachypithecus_pileatus.k141_2007326                   I 1 C 0
s Tupaia_chinensis.KB320699.1                              2152550 35 +   4065304 ----A-----------------A-----AACCT--CAGTC--A-CACACG-TAA--ACT----TT-A----AC-----------AATT----G
i Tupaia_chinensis.KB320699.1                            I 1 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     5862 37 -     10553 A-A-A-----------------A-----AACCT--TAGTC--A-CACACA-TGA--ACT----TT-A----AC-----------AATT----G
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 301
s Ursus_maritimus.KK499267.1                               4848566 38 -   5085361 --A-AAAAA-------------A-----CCTCTTGCAACT-------ACA-TGA--ATT----TT-A----GC-----------AATT----C
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   9120 38 +     50397 A-A-A-----------------A----ACTTCT--TAACC--A-CACATA-GGA--ACT----TT-A----AC-----------AACT----C
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              9174 38 +     24756 A-A-A-----------------A----ACTTCT--TAATC--A-CACATA-GGA--ACT----TT-A----AC-----------AACT----C
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5370031 20 -   5488506 T-A-AAAAA-------------A-----CCTCT--CATCC-------AC--------------------------------------------
i Vicugna_pacos.KN270157.1                               C 0 I 4
s Vulpes_lagopus.VulLag_flattened_line_30954                  9029 34 -     43706 A-A-AAAAA-------------A-----CCTCTTGTGACT-------ACA-TGA--ACT----TT-A----GG--------------------
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 5
s Xerus_inauris.XerIna_scaffold_48378                        21856 32 -     24430 A-A-A-----------------A-----CCTCT--CAGAC--A-CACACA-TGA--ATT----TC-A----AC--------------------
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          3266 37 +     86975 --A-AAAAA-------------A-----CCTCTTGCAAAT-------ACA-TGA--ACT----TG-A----GC-----------AATT-----
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519  0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188  0 +      1777 C
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  0 -     10935 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383  9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10240  0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Oryctolagus_cuniculus.CM000791.1                        67144574 44 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Loxodonta_africana.GL010049.1                            4214777  0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3730 44 -     14121 I
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491  0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1089268  0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Crocidura_indochinensis.CroInd_scaffold_287352              1624  0 +      4208 I
e Condylura_cristata.JH655891.1                           17547132  5 -  53390261 I
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       3813 4 +     62944 TCC---T
s Acomys_cahirinus.AcoCah_scaffold_12655                     68078 4 +     87051 GTC---T
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9508708 4 -  29979442 CCC---T
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             77495 4 -    347723 CTC---T
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     71706 4 -     89534 CCC---T
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   11732 4 -     52922 TCC---T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         11666 4 -     28001 TCC---T
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          2112 4 -     18505 TCC---T
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           2961 4 -     12518 TCC---T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                               566 4 -     27731 TCC---T
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                 689 4 +      3134 TCC---T
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                                827 4 -     45847 TCC---T
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                22031 4 +     25266 TCC---T
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           1215 4 +      2906 TCC---T
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            15328 4 -     18578 TCC---T
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                               715 4 +     47717 TCC---T
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                              846 4 -      3544 TCC---T
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             12065 4 +     50774 TCC---T
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  12688 4 -     33861 CCT---T
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            12709 4 -     34016 CCC---T
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4295105 4 -   5030052 CCC---T
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             12710 4 -     34685 CCC---T
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               25831 4 -     47192 CCC---T
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       9375 2 +     20879 CC-----
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                        8222 4 +     14667 TTC---C
i Arctocebus_calabarensis.k141_2318572                   C 0 I 293
s Avahi_laniger.k141_765380                                  51412 1 -     92717 T------
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              52041 1 +     85213 T------
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             2456 4 -     10423 CCC---T
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             21952 4 +     31915 CCC---T
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            2426 4 +      5267 CCC---T
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23587640 4 - 189096842 CCC---T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              9170 4 -     12001 CCC---T
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10000555 4 -  17673402 CCT---T
i Camelus_bactrianus.KN276810.1                          I 4 C 0
s Camelus_dromedarius.KN272107.1                           2333019 4 -   7040546 CCT---T
i Camelus_dromedarius.KN272107.1                         I 4 C 0
s Camelus_ferus.KB017975.1                                  401295 4 -   1652518 CCT---T
i Camelus_ferus.KB017975.1                               I 4 C 0
s CanFam4.chr16                                           17797452 4 -  60362399 TCC---T
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    183509 4 -    185531 TCC---T
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9032895 4 -   9314153 TCC---T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17957160 4 -  59632846 TCC---T
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18498498 4 +  63665305 TCC---T
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           153728 5 -    496798 --CTCCT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    135815 4 +    179628 TCC---T
i Castor_canadensis.CasCan_scaffold_2074                 I 4 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     91146 4 +    217609 CCC---T
i Catagonus_wagneri.CatWag_scaffold_2839                 I 259 C 0
s Cebuella_niveiventris.k141_1251222                          7080 4 -     11392 CCC---T
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               3178 4 -      7577 CCC---T
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         3227 2 +     31688 --C---T
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12229572 4 +  27778364 CTC---T
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634            599 4 -     25243 CTC---T
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4472691 4 +   4669795 TCC---T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        11238 4 -     19203 TCC---T
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           5660 4 +      8260 TCC---T
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           5887 4 +     27781 TCC---T
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         6043 4 -     20310 TCC---T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           9024 4 +     29689 TCC---T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            3452 4 +      9989 TCC---T
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          11701 4 -     27936 TCC---T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                             576 4 -     17152 TCC---T
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38814106 4 +  39242232 TCC---T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21219805 4 -  21565898 TCC---T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       36924 4 -     53127 TCC---T
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        4207 4 +      7159 TCC---T
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       11727 4 -     27947 TCC---T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         11700 4 +     17596 TCC---T
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                           922 4 +     26000 TCC---T
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            5675 4 -      6351 CTC---T
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 I 37
s Cheirogaleus_major.k141_333249                             18826 4 -     52598 TCC---T
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           14171 4 +     57038 TCC---T
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           8100 4 +     11226 CCC---T
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18425665 4 -  18827391 TCC---T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       12103 4 -     50209 TCC---T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135419109 4 + 135778131 TCC---T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 16003 4 +     19366 CTC---T
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            171102 4 +    839153 CTC---T
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1907625 4 +   2368649 TCC---T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199947297 4 + 200372422 TCC---T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              34168 4 +     84244 TCC---T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          12152 4 -     20389 CCC---T
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 47779 4 +     63868 CTC---T
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11665117 4 + 224834208 CTC---T
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             26630 3 -     87169 -CC---T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 1 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    834884 3 +   1526836 -CC---T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            61983 4 +   2246927 CTC---T
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12535026 2 -  12879189 TC-----
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  671424 4 +   1390856 CTC---T
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    4180 4 +    198055 CTC---T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE759718.1                                   8668 4 +     11740 CCC---T
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          17305 4 -    110024 CTC---T
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01109367.1                            3359 4 -      6299 CTC---T
i Ellobius_talpinus.LOJH01109367.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16327460 4 -  41312741 CTC---T
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1281478 4 +   4378816 CCC---T
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18529299 4 -  39960074 CCC---T
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               31314 4 +    498745 CCC---T
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21202304 4 -  21539334 TCC---T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              11520 4 -     14127 TCC---T
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                4218 4 -     16928 TCC---T
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              13254 4 -     25546 TCC---T
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            10444 4 +     26330 TCC---T
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 11684 4 +     23973 TCC---T
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                10444 4 +     75513 TCC---T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  8387 4 +     97555 TCC---T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            11322 4 +     26496 TCC---T
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  1920 4 -     17153 TCC---T
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              11496 4 +    111500 TCC---T
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Galago_moholi.ctg2040                                     423751 4 -    453645 TCC---C
i Galago_moholi.ctg2040                                  C 0 I 303
s Galago_senegalensis.k141_631886                             1458 4 +     11339 TCC---C
i Galago_senegalensis.k141_631886                        C 0 I 303
s Galagoides_demidoff.k141_1959596                            5265 4 +      6795 TCC---C
i Galagoides_demidoff.k141_1959596                       C 0 I 303
s Galeopterus_variegatus.GalVar_scaffold_266699               1986 4 +      2098 CTC---T
i Galeopterus_variegatus.GalVar_scaffold_266699          C 0 n 0
s Gorilla_beringei.k141_3596273                              13066 4 -     32273 TCC---T
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186335214 4 + 186649187 TCC---T
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   32244 4 +     78134 CCC---T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           4574 4 -     19426 TCC---T
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              9723 4 -     15286 TCC---T
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             11362 4 +     18253 TCC---T
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         11463 4 -     41752 TCC---T
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         11301 4 -     16460 TCC---T
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               240480 3 +    327341 -CC---T
i Helogale_parvula.HelPar_flattened_line_2585            I 1 C 0
s Hipposideros_armiger.JXIK01000431.1                       109958 4 +   1711038 CTC---T
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               41381 4 +     43066 CTC---T
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    431880 4 +    630532 TCC---T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  42609 3 +     55795 -CC---T
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 1 C 0
s Hylobates_agilis.k141_307679                               14814 4 -     15490 TCC---T
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              56820 4 +     67168 TCC---T
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189540470 4 - 191637585 TCC---T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3333364 4 -  11177569 TCC---T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7517429 4 -   7955117 CCT---T
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   20269 1 +     31101 T------
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8276343 4 -   9596543 CCC---T
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lemur_catta.scaffold_24                                 15521825 4 -  30322482 TCC---T
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        4817 4 +     64341 CCC---T
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           1877 4 +      4941 CCC---T
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4745 4 +     35603 CCC---T
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    26217 4 +     38576 CCC---T
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         22914 4 +     66356 CCC---T
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          8704 4 -     23766 TCC---T
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             26651 4 +     45836 TCC---T
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_667017                          1307 4 -      2151 TCC---T
i Lepilemur_ruficaudatus.k141_667017                     n 4 I 548
s Lepilemur_septentrionalis.k141_185316                      24706 4 +     54090 TCC---T
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.APMU01168965.1                       245 4 -      1094 ACC---T
i Leptonychotes_weddellii.APMU01168965.1                 C 0 C 0
s Lophocebus_aterrimus.ctg367                              1434236 4 +   1826925 TCC---T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            3216 4 +     11245 TCT---G
i Loris_lydekkerianus.k141_2539221                       C 0 I 295
s Loris_tardigradus.ctg83                                  1002054 4 +   6120653 TCT---G
i Loris_tardigradus.ctg83                                C 0 I 295
s Lycaon_pictus.CM007581.1                                17953400 4 -  59628241 TCC---T
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               4049 4 +     40492 TCC---T
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59673311 4 +  60120075 TCC---T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  9805 4 -     26193 TCC---T
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            77609 4 -    114318 TCC---T
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  3316 4 -     23192 TCC---T
i Macaca_fuscata.k119_255327                             C 0 I 52
s Macaca_leonina.k141_3550399                                12768 4 -     29190 TCC---T
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  21336 4 +     37952 TCC---T
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186836424 4 + 187317192 TCC---T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25454987 4 -  25927173 TCC---T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  77185 4 +     89720 TCC---T
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 4182 4 +     20474 TCC---T
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   3984 4 -     14993 TCC---T
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  326854 4 -    668171 TCC---T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 2294 4 -     24072 TCC---T
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               22923 4 -     45290 TCC---T
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88744 4 +     94391 CCC---T
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23934510 4 -  24302211 TCC---T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               348643 4 +    752769 TCC---T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              17596 4 +    737560 CCC---T
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              48982 4 -    317179 CCC---T
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33099741 4 -  40650429 CCT---T
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         8494 4 -    207569 CCT---C
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              8176 4 +     13704 CTC---T
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 29705 4 +    140813 TTC---T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12180177 4 -  29670104 CTC---T
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                3002 4 -      7380 CCC---T
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               2068 4 +     18990 CCC---T
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      3007 4 -      7356 CCC---T
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18289210 4 -  93316391 TCC---T
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11257815 4 -  27267610 CTC---T
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miopithecus_ogouensis.k141_534055                           6230 4 -     28506 TCC---T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         3659 4 -      8324 ACT---T
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      6783 4 -     37649 TCC---T
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 139443 4 -    366855 CCC---A
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 8 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   33587 3 +     37127 -CC---T
i Mungos_mungo.MunMun_flattened_line_23663               I 1 C 0
s Mus_caroli.LT608237.1                                   84358790 4 - 120012414 CTC---T
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87647779 4 - 129401213 CTC---T
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31352065 4 -  89631738 CTC---T
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90749857 4 - 130317789 CTC---T
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              4524 4 +     14296 CCC---T
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               299357 4 -  14710649 CTC---T
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186924 4 +    196477 CTC---T
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nasalis_larvatus.k141_413338                               12226 4 +     21681 TCC---T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    758041 4 +    783361 CCC---T
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9147658 4 -   9404916 TCC---T
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102576990 4 - 196305487 TCC---G
i Nycticebus_bengalensis.LG01                            C 0 I 276
s Nycticebus_coucang.k141_5327727                             4676 4 +      8486 TCC---G
i Nycticebus_coucang.k141_5327727                        C 0 I 276
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105747417 4 + 199412804 TCT---G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 276
s Ochotona_princeps.JH802162.1                             1360787 2 +   3988456 TT-----
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              504747 4 -   2017862 ACC---T
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   21931 4 +     28053 CTC---T
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    77007 4 +    102263 CTC---T
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       460414 4 -    559221 TCC---T
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         1293 4 +      8798 TCC---C
i Otolemur_crassicaudatus.k141_222918                    C 0 I 303
s Otolemur_garnettii.GL873799.1                             693460 4 -   1103335 TCC---C
i Otolemur_garnettii.GL873799.1                          C 0 I 303
s Pan_paniscus.KQ411613.1                                    41165 4 +     80009 TCC---T
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189140075 4 + 189151597 TCC---T
i Pan_troglodytes.CM009242.2                             I 34 C 0
s Papio_anubis.CM001495.2                                183440265 4 + 183742232 TCC---T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             3957 4 +     20448 TCC---T
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20560763 4 +  20919399 TCC---T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   2701 4 +     41871 TCC---T
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     5987 4 +     27711 TCC---T
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  6066 4 +      9205 TCC---T
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10796 3 -     78924 -CC---T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 1 C 0
s Perodicticus_ibeanus.k141_855320                            7440 4 +     13100 TTC---C
i Perodicticus_ibeanus.k141_855320                       C 0 I 295
s Perodicticus_potto.k141_1092580                             5813 4 +     25941 TTC---C
i Perodicticus_potto.k141_1092580                        C 0 I 295
s Peromyscus_maniculatus.KI615324.1                       18191606 4 -  18517816 CTC---T
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Piliocolobus_badius.k141_1234363                           40741 4 +     62158 TCC---T
i Piliocolobus_badius.k141_1234363                       C 0 I 48
s Piliocolobus_gordonorum.k141_381342                        35463 4 +     89929 TCC---T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            36879 4 +     51399 TCC---T
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14293117 4 -  14605196 TCC---T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189128190 4 + 189387572 TCC---T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9567798 4 +   9816681 TCC---T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               70389 4 -     81375 TCC---T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              2209 4 +     19060 TCC---T
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2594475 4 -   4620579 TCC---T
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     988466 1 +   2598838 T------
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          26776 1 +     38485 T------
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             2936 1 +      4256 T------
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          24296 1 +     35766 T------
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           2479 1 -     24134 T------
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        26292 1 -     67325 T------
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           2529 1 -      6182 T------
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             7347 4 -     21651 TTC---T
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            12834 4 -     21811 CCC---T
i Pteronotus_parnellii.KE909381.1                        I 8 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         38369 4 +     42204 CTC---T
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22974943 4 +  28871421 TCC---T
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1358032 4 +   4952924 CCC---T
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             12224 4 -     91421 TCC---T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7606350 4 +   7812017 TCC---T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             12198 4 -     72585 TCC---T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53567861 4 +  90668790 TTT---T
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             3905 4 -     11128 TCC---T
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91233260 4 - 195417433 TCC---T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7668909 4 +   7961872 TCC---T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85936 4 -     96226 ccc---t
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               5125 4 -      8359 CCC---T
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            11433 4 -     13588 CCC---T
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              5071 4 -      6207 CCC---T
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               10798 4 +     13640 CCC---T
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               5661 4 +      8564 CCC---T
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209465938 4 + 209938924 CCC---T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 5152 4 -      9399 CCC---T
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 2298 4 +      3421 CCC---T
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119948476 4 - 121099817 CCC---T
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       20943 4 +     46362 CCC---T
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               21038 4 +     45824 CCC---T
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             37653 4 -     64574 CCC---T
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                                659 4 -     23631 CCC---T
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 20931 4 -     61129 CCC---T
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          16732 4 -     19888 TCC---T
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      23935 4 +     39453 TCC---T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            4461 4 +     27826 TCC---T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             3981 4 -     19483 TCC---T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      4043 4 +      7198 TCC---T
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         12303 4 +     15514 TCC---T
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11011 4 -     12148 TTC---T
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               1971 4 +   1910179 CCC---T
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1950514 4 -   3870691 CCT---T
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             28888 4 +     97271 TTC---T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              16481 3 -    196729 -CC---T
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 C 0
s Sus_scrofa.JH118708.1                                      33683 2 -     47482 --c---t
i Sus_scrofa.JH118708.1                                  I 299 C 0
s Symphalangus_syndactylus.tarseq_199                      1090512 4 -   1523678 TCC---T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 8784 4 +     41958 CCC---T
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 5
s Tamandua_tetradactyla.TamTet_scaffold_1782                 70278 4 +    116680 CTC---T
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      116900 4 -    156842 CCT---T
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    385353 4 +    539355 CCT---T
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               23836 4 +     70052 TCC---T
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_2029956                               3181 4 +      4644 TCC---T
i Tarsius_wallacei.k141_2029956                          C 0 C 0
s Theropithecus_gelada.CM009954.1                        186425630 4 + 186847797 TCC---T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   2843 4 +      8208 CTC---T
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Trachypithecus_auratus.k141_722599                          8034 4 -     20410 TCC---T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    12228 4 +     15221 TCC---T
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        8135 4 +     19930 TCC---T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       4564 4 -     19997 TCC---T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            44684 4 -     60166 TCC---T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        12156 4 -     27529 TCC---T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     12098 4 -     18194 TCC---T
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           5831 4 -     21137 TCC---T
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    4534 4 -     10723 TCC---T
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         3686 4 +      9834 TCC---T
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        22002 4 +     32220 TCC---T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5936101 4 +   6242583 TCC---T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        5349 4 +     20839 TCC---T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2152585 4 +   4065304 CCC---T
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     6200 4 -     10553 CCC---T
i Tupaia_tana.TupTan_flattened_line_97126                I 301 C 0
s Ursus_maritimus.KK499267.1                               4848604 4 -   5085361 CCC---T
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   9158 4 +     50397 TCC---T
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              9212 4 +     24756 TCC---T
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5370055 4 -   5488506 CCT---T
i Vicugna_pacos.KN270157.1                               I 4 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  9068 4 -     43706 TCC---T
i Vulpes_lagopus.VulLag_flattened_line_30954             I 5 C 0
s Xerus_inauris.XerIna_scaffold_48378                        21888 4 -     24430 CCT---T
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          3303 4 +     86975 ACC---T
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Sapajus_macrocephalus.k141_351809                          54316 0 -     80660 C
e Sapajus_apella.ctg103                                    5419275 0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519 0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188 0 +      1777 C
e Cebus_albifrons.Contig27                                25650611 0 +  26074798 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906 0 -     10935 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383 9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553 7 +    610378 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937 0 +    114563 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20272452 0 -  38429054 C
e Procavia_capensis.ProCapCap_scaffold_85530                 10240 0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823 1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813 0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4719175 0 -   8748460 C
e Panthera_pardus.KV860321.1                                262538 0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  149333 0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Oryctolagus_cuniculus.CM000791.1                        67144574 44 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387               7328 41 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805 0 +       996 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016 1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456 1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390 1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692 1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520 1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686 0 +   8254450 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009 7 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    15899 218 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Loxodonta_africana.GL010049.1                            4214777 0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     3730 44 -     14121 I
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547 0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_383740                 491 0 +       961 C
e Heterocephalus_glaber.JH602082.1                        20660051 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  7681 0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20194167 0 + 205367284 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447 1 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1089268 0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084 0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495 7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Crocidura_indochinensis.CroInd_scaffold_287352              1624 0 +      4208 I
e Condylura_cristata.JH655891.1                           17547132 5 -  53390261 I
e Chinchilla_lanigera.JH722012.1                           1251498 0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157 0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465 7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102 7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691 7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Acinonyx_jubatus.LLWD01001279.1                           825453 0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       3817 135 +     62944 GCCATTCCAG--AGTC-AGTTCTGCTTTTAGA-TATGAG-AAATAC--TAA-TAAC----AC-CTAAAGG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-C--CCCTCT-GAGA-TT--TAGC----ATGAACCACATTAT--ATTGC-A----A---T-TGT----ATTTA----T-T-G---GT
s Acinonyx_jubatus.LLWD01001279.1                           825453 137 -   1699592 -CCATTTCAG--AGT-TCATTCTGCTTTTAGA-CATGAG-AAATAT--GAT-CAAA----AG-CCAAAAG-TTT-CT-ATGCTAAAC-TG------------------ATCAGCTATT-cc--tcctct-gaga-tt--cagt----tttgaccatattat--attac-a----act-t-tct----gatta----t-t-g---at
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     68082 121 +     87051 GACACTCCAT--GGTC-AGTTTTGCTTTCAAA-TATTAG-AAATAC--TA--TCAA----TAACAAAA-G-TT-TCC-ATGCTGAGC-TA------------------ATTAGCTGTCC-T--TTAGCT-GAGATT---TAGT----GCTTATCATAATAA--ATTGC-T----A-------------------------------
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 6
s Ailuropoda_melanoleuca.LNAT01000098.1                    9508712 137 -  29979442 GCCATTC--G--ATT-TCATTCTACTTTTAGA-TATGAG-AAATAT--TAT-CAAA----AG-CCAAAGG-TTT-CT-ATGCTAAAC-TG------------------ATTAGCCATT-TC--TCCTCT-GAGA-TT--tagt----atttaccacattat--tttgc-a----att-t-tct----gttta----ttg-c---tc
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             77499 120 -    347723 GCCATTCCAG--AGT-TCATTCTACTTTTAGA-TATGAG-AAATAT--TAT-CAAA----AG-CCAAAGg-ttt-ct-atgctaaac-tg------------------attatccatt-cc--tcttct-gaga-tt--tagt----atttactacattat--atttt--------------------------------------
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 20
s Allactaga_bullata.AllBul_scaffold_9566                     71710 138 -     89534 GCCATTCCAC--AGTC-AGCTACACATTTAGA-TAGAAT-AAATGT--TA--TGAG----TAGCACAAGA-TGT-GC-ACACAAAAT-TT------------------ATTAGCTATTC-C--TTACAT-GAGATT---TAGT----GTTTATCGCCATAC--ATTGC-A----A-TCT-T-T--TTGTT-A----T-T-G---GT
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   11736 135 -     52922 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-ATGCCGAAC-TG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         11670 135 -     28001 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAATGG-CCT--C-ATGCCGAAC-TG------------------CGTAGCCATTC-T--CCCTCT-GAGA-C-TT-AGC----ATGAACCACATTAT--ACTGC-C----A---T-TAT----GTGTA----T-T-G---GT
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          2116 135 -     18505 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-ATGCCGAAC-TG------------------CGTAGCCATTC-T--CCCTCT-GAGA-C-TT-AGC----ATGAACCACATTAT--ACTGC-C----A---T-TGT----GTGTA----T-T-G---GT
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           2965 135 -     12518 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-ATGCCGAAC-TG------------------CGTAGCCATTC-T--CCCTCT-GAAA-C-TT-AGC----ATGAACCACATTAT--ACTGC-C----A---T-TGT----GTGTA----T-T-G---GT
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                               570 134 -     27731 GCCATTCCAG--AGTT-ACTTCTACCTTTAGA-TATGGG-GAATAC--TGC-TAAC----AC-CTCA-GG-CCT--C-ACGCTGAAC-TG------------------ATCAGCCATTC-C--TCCTCT-GAGA-TT--TAGC----ACGAACCACATTCT--ATTGC-A----A---T-TGT----GATTA----T-T-G---GT
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                 693 134 +      3134 GCCATTCCAG--AGTT-ACTTCTACCTTTAGA-TATGGG-GAATAC--TGC-TAAC----AC-CTCA-GG-CCT--C-ACGCTGAAC-TG------------------ATCAGCCATTC-C--TCCTCT-GAGA-TT--TAGC----ATGAACCACATTCT--ATTGC-A----A---T-TGT----GATTA----T-T-G---GT
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                                831 134 -     45847 GCCATTCCAG--AGTT-ACTTCTACCTTTAGA-TATGGG-GAATAC--TGC-TAAC----AC-CTCA-GG-CCT--C-ACGCTGAAC-GG------------------ATCAGCCATTC-C--TCCTCT-GAGA-TT--TAGC----ACAAACCACATTCT--ATTGC-A----A---T-TGT----GATTA----T-T-G---GT
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                22035 134 +     25266 GCCATTCCAG--AGTT-ACTTCTACCTTTATA-TATGGG-GAATAC--TGC-TAAC----AC-CTCA-GG-CCT--C-ACGCTGAAC-TG------------------ATCAGCCATTC-C--TCCTCT-GAGA-TT--TAGC----ATGAACCACATTCT--ATTGC-A----A---T-TGT----GATTA----T-T-G---GT
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           1219 134 +      2906 GCCATTCCAG--AGTT-ACTTCTACCTTTAGA-TATGGG-GAATAC--TGC-TAAC----AC-CTCA-GG-CCT--C-ACGCTGAAC-TG------------------ATCAGCCATTC-C--TCCTCT-GAGA-TT--TAGC----ATGAACCACATTCT--ATTGC-A----A---T-TGT----GATTA----T-T-G---GT
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            15332 134 -     18578 GCCATTCCAG--AGTT-ACTTCTACCTTTAGA-TATGGG-GAATAC--TGC-TAAC----AC-CTCA-GG-CCT--C-ACGCTGAAC-TG------------------ATCAGCCATTC-C--TCCTCT-GAGA-TT--TAGC----ATGAACCACATTCT--ATTGC-A----A---T-TGT----GATTA----T-T-G---GT
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                               719 134 +     47717 GCCATTCCAG--AGTT-ACTTCTACCTTTAGA-TATGGG-GAATAC--TGC-TAAC----AC-CTCA-GG-CCT--C-ACGCTGAAC-TG------------------ATCAGCCATTC-C--TCCTCT-GAGA-TT--TAGC----ATGAACCACATTCT--ATTGC-A----A---T-TGT----GATTA----T-T-G---GT
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                              850 134 -      3544 GCCATTCCAG--AGTT-ACTTCTACCTTTAGA-TATGGG-GAATAC--TGC-TAAC----AC-CTCA-GG-CCT--C-ACGCTGAAC-TG------------------ATCAGCCATTC-C--TCCTCT-GAGA-TT--TAGC----ATGAACCACATTCT--ATTGC-A----A---T-TGT----GATTA----T-T-G---GT
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             12069 134 +     50774 GCCATTCCAG--AGTT-ACTTCTACCTTTATA-TATGGG-GAATAC--TGC-TAAC----AC-CTCA-GG-CCT--C-ACGCTGAAC-TG------------------ATCAGCCATTC-C--TCCTCT-GAGA-TT--TAGC----ATGAACCACATTCT--ATTGC-A----A---T-TGT----GATTA----T-T-G---GT
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  12692 134 -     33861 GCCATTCCAG--AGTC-ACTTATGCCTTTAGA-TATGGG-GAATAC--TGC-TAAC----AA-CTCA-GG-CCT--C-ATGCTGAAC-TG------------------ATCAGCCATTC-C--TCCTCT-GAGA-TT--TAGC----ATGAACCGCATTCT--ATTGC-A----A---T-TGT----GATTA----T-T-G---GT
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            12713 134 -     34016 GCCATTCCAG--AGTC-ACTTATGCCTTTACA-TATGGG-GAATAC--TGC-TAAC----AA-CTCA-GG-CCT--C-ATGCTGAAC-TG------------------ATCAGCCATTC-C--TCCTCT-GAGA-TT--TAGC----ATGAACCACATTCT--ATTGC-A----A---T-TGT----GATTA----T-T-G---GT
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4295109 134 -   5030052 GCCATTCCAG--AGTC-ACTTATGCCTTTAGA-TATGGG-GAATAC--TGC-TAAC----AA-CTCA-GG-CCT--C-ATGCTGAAC-TG------------------ATCAGCCATTC-C--TCCTCT-GAGA-TT--TAGC----ATGAACCGCATTCT--ATTGC-A----A---T-TGT----GATTA----T-T-G---GT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             12714 134 -     34685 GCCATTCCAG--AGTC-ACTTATGCCTTTAGA-TATGGG-GAATAC--TGC-TAAC----AA-CTCA-GG-CCT--C-ATGCTGAAC-TG------------------ATCAGCCATTC-C--TCCTCT-GAGA-TT--TAGC----ATGAACCGCATTCT--ATTGC-A----A---T-TGT----GATTA----T-T-G---GT
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               25835 134 -     47192 GCCATTCCAG--AGTC-ACTTATGCCTTTAGA-TATGGG-GAATAC--TGC-TAAC----AA-CTCA-GG-CCT--C-ATGCTGAAC-TG------------------ATCAGCCATTC-C--TCCTCT-GAGA-TT--TAGC----ATGAACCGCATTCT--ATTGC-A----A---T-TGT----GATTA----T-T-G---GT
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       9377 130 +     20879 -----TGCAG--AGTT-TGCTCTGCCTTTAGA-TAAGAA-TAGTAC--TAT-CAGT----AG-CTAAAGG-TAA-CC-ACATTAAAT-TT------------------ATCAGTAATTT-C--TCCTCT-GGAA-TT--TACT----ATCTGCCACAATAT--CTTGC-A----A-TTG-T-T-TTCATTCA--------------
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 1
s Arctocebus_calabarensis.k141_2318572                        8519  90 +     14667 --CACTGCAACCGACC-AGTTCTGCTTTCAGA-TAGGAG-AAATAC--AAT-GAAC----AG-CAAAAGA-CCT-CC-TTGCCAAAT-TC------------------ATCAGCTATTT-C--TCCTC------------------------------------------------------------------------------
i Arctocebus_calabarensis.k141_2318572                   I 293 I 615
s Avahi_laniger.k141_765380                                  51413 137 -     92717 GTCATTCCAG--AGTC-AGTTCTATTTTTAAAATTGGAG-AAATAC--TAT-GAAC----AG-CTAAAGG-CCT-CC-ACACTAAAT-TG------------------ATTAGCCATTC-C--TCCTCT-GAGA-TT--tagt----atttacc--attat--attgc-a----atttt-t-t----gttta----t-t-g---gt
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              52042 137 +     85213 GTCATTCCAG--AGTC-AGTTCTATTTTTAAAATTGCAG-AAATAC--TAT-GAAC----AG-CTAAAGG-CCT-CC-ACACTAAAT-TG------------------ATTAGCCATTC-C--TCCTCT-GAGA-TT--TAGT----ATTTACC--ATTAT--ATTGC-A----atttt-t-t----gttta----t-t-g---gt
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             2460  80 -     10423 GCCATTCCAG--AGTC-ACTTCTGCCTTCAGA-TATGGA-GAATAC--AGC-TAAC----AC-CTCA-GG-CCT--C-ACGCTGAAC-AG------------------ATCAGCCAC-----------------------------------------------------------------------------------------
i Callibella_humilis.k141_1278103                        C 0 I 51
s Callimico_goeldii.k141_1091182                             21956 134 +     31915 GCCATTCCGG--AATC-ACTTCTGCCTTTAGA-TATGGG-GAATGC--TGC-TCAC----AC-CTCA-GG-CCT--C-ATGCTGAAC-GG------------------ATCAGCCACTC-C--TCCTCT-GAGG-TT--CAGC----ATGAACCACATTCT--CTTGC-A----G---T-TGT----GATTA----T-T-G---GT
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            2430  80 +      5267 GCCATTCCAG--AGTC-ACTTCTGCCTTCAGA-TATGGG-GAATAC--AGC-TAAC----AC-CTCA-GG-CCT--C-ACGCTGAAC-GG------------------ATCAGCCAC-----------------------------------------------------------------------------------------
i Callithrix_geoffroyi.k119_512088                       C 0 I 51
s Callithrix_jacchus.pat_scaffold_3                       23587644  80 - 189096842 GCCATTCCAG--AGTC-ACTTCTGCCTTCAGA-TATGGG-GAATAC--AGC-TAAC----AC-CTCA-GG-CCT--C-ACGCTGAAC-GG------------------ATCAGCCAC-----------------------------------------------------------------------------------------
i Callithrix_jacchus.pat_scaffold_3                      C 0 I 51
s Callithrix_kuhlii.k119_1164682                              9174  80 -     12001 GCCATTCCAG--AGTC-ACTTCTGCCTTCAGA-TATGGG-GAATAC--AGC-TAAC----AC-CTCA-GG-CCT--C-ACGCTGAAC-GG------------------ATCAGCCAC-----------------------------------------------------------------------------------------
i Callithrix_kuhlii.k119_1164682                         C 0 I 51
s Camelus_bactrianus.KN276810.1                           10000559 137 -  17673402 GCCATTCCAG--AGT-TGGTTCTGCTTTTTGT-TATGAG-AAATAC--TAT-CAAG----AG-CTAAAGg-ttt-cc-atgctaaac-tg------------------attatccatt--c--tccttt-gaga-tt--tagt----atttaccagattat--gctgc-a----att-t-tct----attta----t-t-g---gc
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2333023 137 -   7040546 GCCATTCCAG--AGT-TGGTTCTGCTTTTTGT-TATGAG-AAATAC--TAT-CAAG----AG-CTAAAGg-ttt-cc-atgctaaac-tg------------------attatccatt--c--tccttt-gaga-tt--tagt----atttaccagattat--gctgc-a----att-t-tct----attta----t-t-g---gc
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  401299 137 -   1652518 GCCATTCCAG--AGT-TGGTTCTGCTTTTTGT-TATGAG-AAATAC--TAT-CAAG----AG-CTAAAGg-ttt-cc-atgctaaac-tg------------------attatccatt--c--tccttt-gaga-tt--tagt----atttaccagattat--gctgc-a----att-t-tct----attta----t-t-g---gc
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17797456 138 -  60362399 GCTGTGCCAG--AGT-TCATTCTACTTTTAGA-TATGAG-AAATAT--TAT-CAAA----AG-CCAAAGG-TTT-CT-ATGCTAAAC-TG------------------ATTAGCCGTT-CC--TCCTCT-GAGA-TT--TAGT----ATTTGCCACAttat--attac-a----att-t-tct----gttta----t-t-t---at
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    183513 138 -    185531 GCTGTGCCAG--AGT-TCATTCTACTTTTAGA-TATGAG-AAATAT--TAT-CAAA----AG-CCAAAGG-TTT-CT-ATGCTAAAC-TG------------------ATTAGCCGTT-CC--TCCTCT-GAGA-TT--TAGT----ATTTGCCACAttat--attac-a----att-t-tct----gttta----t-t-t---at
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9032899 138 -   9314153 GCTGTGCCAG--AGT-TCATTCTACTTTTAGA-TATGAG-AAATAT--TAT-CAAA----AG-CCAAAGG-TTT-CT-ATGCTAAAC-TG------------------ATTAGCCGTT-CC--TCCTCT-GAGA-TT--TAGT----ATTTGCCACAttat--attac-a----att-t-tct----gttta----t-t-t---at
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17957164 138 -  59632846 GCTGTGCCAG--AGT-TCATTCTACTTTTAGA-TATGAG-AAATAT--TAT-CAAA----AG-CCAAAGG-TTT-CT-ATGCTAAAC-TG------------------ATTAGCCGTT-CC--TCCTCT-GAGA-TT--TAGT----ATTTGCCACAttat--attac-a----att-t-tct----gttta----t-t-t---at
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18498502 138 +  63665305 GCTGTGCCAG--AGT-TCATTCTACTTTTAGA-TATGAG-AAATAT--TAT-CAAA----AG-CCAAAGG-TTT-CT-ATGCTAAAC-TG------------------ATTAGCCGTT-CC--TCCTCT-GAGA-TT--TAGT----ATTTGCCACAttat--attac-a----att-t-tct----gttta----t-t-t---at
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           153733 138 -    496798 GTTGTTCCAG--AGTC-AGTTTGACTTTTAGA-CATGag-aaatac--tat-gaac----aa-ctaaACA-CTT-GC-ACTCTAAAT-CG------------------ATTGGCCTTTC-C--TTCTCT-GAGA-TG--TGGT----ATTAGTCACATTGT--Gttgc-a----att-t-ttt----gttta----t-t-g---gt
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    135819 140 +    179628 GCCATTGCAG--AGCC-AACTCTGCTTTTAGA-TAGGAG-AA------TA--GAATTAACTA-TGCAAAG-ATA-CC-ACAATAAAC-AT------------------ATTAGCCTTTC-C--TCTTCT-GAGA-T-T-TAAT----ATTTACCACAttat--attgc-a----gct-t-t-t----cttttctttt-t-g---gt
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     91150 135 +    217609 GCCATTCCAG--GGT-TAGTTCAGCTTTTTTA-TATGAG--AATAT--TAT-TAAG----AG-CAA-AAG-TTT-CT-ATGCTAAAC-TG------------------ATCAGCCATT--C--TCCTCT-GAGA-TT--TAAT----ATTTATCAGATTAT--ATTGC-A----G-TTT-TCT----GTTTA----T-T-A---CT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          7084  80 -     11392 GCCATTCCAG--AGTC-ACTTCTGCCTTCAGA-TGTGGG-GAATAC--AGC-TAAC----AC-CTCA-GG-CCT--C-ACGCTGAAC-GG------------------ATCAGCCAC-----------------------------------------------------------------------------------------
i Cebuella_niveiventris.k141_1251222                     C 0 I 51
s Cebuella_pygmaea.k141_1309012                               3182  80 -      7577 GCCATTCCAG--AGTC-ACTTCTGCCTTCAGA-TATGGG-GAATAC--AGC-TAAC----AC-CTCA-GG-CTT--C-ACGCTGAAC-GG------------------ATCAGCCAC-----------------------------------------------------------------------------------------
i Cebuella_pygmaea.k141_1309012                          C 0 I 51
s Cephalopachus_bancanus.k141_1423433                         3229 138 +     31688 GTTGTTCCAG--AGTC-AGTTTGGCTTTTAGA-TATGAG-AAATAC--TAT-GAAC----AG-CTAAACA-CTT-GC-ACTCTAAAT-CG------------------ATTGGCCTTTC-C--TTCTCT-GAGA-TG--TGGT----ATTAGCCACATTGT--GTTGC-A----att-t-ttt----gttta----t-t-g---gt
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12229576 137 +  27778364 GCCATTCTAG--TGT-TGGTTATGCTTTTAGA-TATGAG-AAATAT--TAT-CAAA----AG-CTAAAGG-TTT-CT-CTGCTAAAC-TG------------------ATTAGC-ATT-CC--TCCACT-GAGA-TT--TAGT----GTATACCACAttat--attga-a----att-t-tct----atttt----t-g-g---at
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634            603 137 -     25243 GCCATTCTAG--TGT-TGGTTATGCTTTTAGA-TATGAG-AAATAT--TAT-CAAA----AG-CTAAAGG-TTT-CT-CTGCTAAAC-TG------------------ATTAGC-ATT-CC--TCCACT-GAGA-TT--TAGT----GTATACCACATTAT--ATTGA-A----A-TTT-TCT----ATTTT----T-G-G---AT
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4472695 135 +   4669795 GCCATTCCAG--AGTC-AGTTCTGCCTGTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-ATGCCGAAC-CG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCGCATTAC--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        11242 135 -     19203 GCCATTCCAG--AGTC-AGTTCTGCCTGTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-ATGCCGAAC-CG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCGCATTAC--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           5664 135 +      8260 GCCATTCCAG--AGTC-AGTTCTGCCTGTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-ATGCCGAAC-CG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCGCATTAC--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           5891 135 +     27781 GCCATTCCAG--AGTC-AGTTCTGCCTGTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-ATGCCGAAC-CG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCGCATTAC--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         6047 135 -     20310 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAGTAC--TAC-GAAC----TC-CTAACGG-CCT--C-ATGCCAAAC-TG------------------AGTAGCCATTC-T--CCCTCC-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           9028 133 +     29689 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----TC-CTAACGG-CCT--C-ATGCTGAAC-CG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTG------T-T-G---GT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            3456 135 +      9989 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          11705 135 -     27936 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----TC-CTAACGG-TCT--C-ATGCTGAAC-CG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAAATACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                             580 135 -     17152 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----TC-CTAATGG-CCT--C-ATGCCAAAC-TG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----G---T-TGT----GTGTA----T-T-G---GT
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38814110 135 +  39242232 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----TC-CTAACGG-CCT--C-ATGCCGAAC-TG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----GTGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21219809 135 -  21565898 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----TC-CTAATGG-CCT--C-ATGCCAAAC-TG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----G---T-TGT----GTGTA----T-T-G---GT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       36928 135 -     53127 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----TC-CTAATGG-CCT--C-ATGCCAAAC-TG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        4211 133 +      7159 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----TC-CTAACGG-CCT--C-ATGCCGAAC-TG------------------AGTAGCCATTC-T--CCCTCC-GAGA-CT--TAGC----GTGAACCACATTAT--ACTGC-A----A---T-TGT----GTG------T-T-G---GT
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       11731 135 -     27947 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----TC-CTAATGG-CCT--C-ATGCCAAAC-TG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----G---T-TGT----GTGTA----T-T-G---GT
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         11704 135 +     17596 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----TC-CTAATGG-CCT--C-ATGCCAAAC-TG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----G---T-TGT----GTGTA----T-T-G---GT
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                           926 135 +     26000 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACAGTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            5716  82 -      6351 -------------------------------------------------------------G-TCAAATG-CCT-CA-ACTCTAAAC-TG------------------GC-AGAGGTTC-C--TCCTCA-GAGC-T---TCCC----ATTTACAA-----T--ATTGG-A----A-TTG-TCT----GTTTA----T-T-T---GA
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       I 37 C 0
s Cheirogaleus_major.k141_333249                             18830 136 -     52598 GCCATTCCAG--AATC-AGCTCTACTTTTAGA-TAGGAG-AAATAC--TAT-GAAC----AG-CTAAAGG-CCT-CC-ATATTAAAT-TG------------------ATTAGCCATTC-C--TCCTCT-GAGA-TT--TAGT----ATTTACC--ATTAT--ATTGC-A----atttt-t-t----gttta----t-t-g---gt
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           14175 136 +     57038 GCCATTCCAG--AATC-AGCTCCACTTTTAGA-TAGGAG-AAATAC--TAT-GAAC----AG-CTAAAGG-CCT-CC-ACACTAAAT-TG------------------ATTAGCCATTC-C--TCCTCT-GAGA-Tt--tact----atttacc--attat--attgc-a----atttt-t-t----gttta----t-t-g---gt
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           8104 134 +     11226 GCCATTCCAG--AGTC-ACTTCTGCCTTTAGA-TATGGG-GAATAC--TGC-TAAC----AC-CTCA-GG-TCT--C-ATGCTGAAT-GG------------------ATCAGCCACTC-C--TTCTCT-GAGA-TT--TAGC----ATGAACCACATTCT--ATTGC-A----A---T-TGT----GATTA----T-T-G---GT
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18425669 133 -  18827391 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-ATGCCGAAC-TG------------------CGTAGCCATTC-T--CCCTCT-GAGA-C----AGC----ATGAACCACATTAT--ACTGC-C----A---T-TGT----GTGTA----T-T-G---GT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       12107 133 -     50209 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-ATGCCGAAC-TG------------------CGTAGCCATTC-T--CCCTCT-GAGA-C----AGC----ATGAACCACATTAT--ACTGC-C----A---T-TGT----GTGTA----T-T-G---GT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135419113 135 + 135778131 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-GTGCCGAAC-TG------------------CGTAGCCATTC-T--CCCTCT-GAGA-C-TT-AGC----ATGAACCACATTAT--ACTGC-C----A---T-TGT----GTGTA----T-T-G---GT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 16007 136 +     19366 GCCATGTCAA--ATT-CAATTCTGCTTTTTGA-TATGAG-AAATAC--TGT-CAAA----AG-TTAAAGG-TGT-CA-ACTCTCAAC-TG------------------AT-AGTCATTC-C--TTCTCA-GATA-T---TTAG----ATttaccaactaat--attgg-a----att-g-tct----gtttt----t-t-t---ga
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            171106 136 +    839153 GCCATGTCAA--ATT-CAGTTCTGCTTTTTGA-TATGAG-AAATAC--TGT-CAAA----AG-Ttaaagg-tgt-ca-actctcaac-TG------------------AT-AGTCATTC-C--TTCTCA-GATA-T---TTAG----ATttaccaactaat--attgg-a----att-g-tct----gtttt----t-t-t---ga
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_172426               9906  41 -     10935 --------------------------------------G-AAATAT--TAT-CAAA----AG-CTAAAGG-TTT-CA-ACTCTAAGC-TG------------------AT------------------------------------------------------------------------------------------------
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          C 0 I 50
s Colobus_angolensis.KN981557.1                            1907629 135 +   2368649 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-T---GT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199947301 135 + 200372422 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-C---GT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              34172 135 +     84244 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-C---GT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          12156 137 -     20389 GCCATTCCAG--AGCC-AGTTCTGCTTTTAGA-TATATG-AAATAT--TAT-TGAA----AG-CTGAAGG-TTT-CT-ATGCTACCC-TG------------------ATTAGTCATT--C--AACTCA-AAGA-TT--TTGT----ATTTACCACAtt--atgttac-a----gtt-t-tct----gttta----t-t-g---gt
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 47783 120 +     63868 GACATACCAT--AGTC-AGTTCTCCTTTCAGA-T--TAG-AAATAG--CA--TCAA----CAGCAAAAGG-TT-TCC-ACACTGAAC-TT------------------ATTAGTCATAC-T--TTAATC-AAGACT---TAGT----ACTTAACATAGTAC--ATTGC-T----A-------------------------------
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 6
s Cricetulus_griseus.LT883664.1                           11665121 122 + 224834208 GACATTCCAG--AGTC-AGTTCTGTTTTCAGA-TTTTAG-AAATGC--CA--TCAA----CAGCAAGAGG-TT-TTC-TGGCCGAAT-TT------------------ATTAGCCATCC-T--TTAGGT-GAGAGT---TTGC----ACTTGTCATAGTAT--ATTAC-T----A-------------------------------
i Cricetulus_griseus.LT883664.1                          C 0 I 6
s Cryptoprocta_ferox.CryFer_flattened_line_16129             26633 138 -     87169 GCCATTTCAG--AGT-TCATTCTAGTTTTAGA-TATGAG-AAATAT--TAT-CAAA----AG-CCAAAAG-TTT-CT-ATGCTAAAC-TG------------------ATTGGCTATT-cc--tcctct-gaga-tt--tagt----attgaccatattat--atttc-a----att-t-tct----gatta----t-t-g---at
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    834887 137 +   1526836 GTTATTCTAG--AATC-AGTTCTGCTTTTCCA-TAGATA-AAACAG--CAT-TAAT----AG-TTTAAAA-TTAT-C-ATGTTAAAC-CT------------------ATTAGCCATTC-A--CCCTTT-GGGA-TT--TAGT-----TATAACATATCAt--attat-a----att-t-t--tt--gttaa----t-t-g---ct
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            61987 136 +   2246927 TCCATGCCAA--AGT-CAGTTCTGCTTTTGGA-TATAAG-AAATAT--TAT-TGAA----AA-CCAAATG-CCT-CA-ACCCTAAAT-CA------------------AT-AGGGGTTc-c--tcctca-gaga-t---ttca----atttacagtgttat--actgg-a----att-g-tct----gatta----t-t-t---ga
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12535028 141 -  12879189 -CCATTCCAG--AGTC-AGTTCTGCTTTTAGA-TAGGAG-AAATACTATAT-GAAC----TG-CTAAAGG-CCT-CA-ACACTAAAT-TA------------------ATTAGCCATTc-c--tcctct-gaga-tt--tagtgtttatttacc--attat--attgt-a----att-t-ttt----gttta----t-t-g---gt
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  671428 137 +   1390856 GCCATTCTAG--TGT-TGGTTATGCCtttaaa-tatgag-aaatat--tAT-CAAA----AG-CTAAAGG-TTT-CT-CTGCTAAAC-TG------------------ATTAGC-ATT-CC--TCCACT-GAGA-TT--TAGT----GTATACCACAttat--attga-a----att-t-tct----atttt----t-g-g---at
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    4184 137 +    198055 GCCATTCTAG--TGT-TGGTTATGCTTTTAGA-TATGAG-AAATAT--TAT-CAAA----AG-CTAAAGG-TTT-CT-CTGCTAAAC-TG------------------ATTAGC-ATT-CC--TCCTCT-GAGA-TT--TAGT----GTATACCACATTAt--attga-a----att-t-tct----atttt----t-g-g---at
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE759718.1                                   8672 140 +     11740 GCCATTTCTG--AGTC-AGTTGTGCTTTTAGA-TACAGG-AAATGT--CAT-AGAA----GG-CTGAAGG-TTT-CT-ATGCTACAC-Tg------------------attagccatt--c--tcctct-gaga-tt--tagt----atttatcacattat--gttac-a----att-t-tct----gttga----c-t-ggtggt
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1089268  91 +  10337057 --------------------------------------G-AAATAT--CAT-TCAA----AG-CTAACGG-TCT-CA-ACTCTAAAC-AA------------------ATTAGCCATTC-ATA--CTCT-GAGA-T--ATAGA----ACATACCACA-------TTCT-A----A-TTA-CTT----AT-----------------
i Elephantulus_edwardii.JH947257.1                       C 0 I 5
s Ellobius_lutescens.LOEQ01008920.1                          17309 123 -    110024 GACATTCCAG--AGCC-GGTTCTGCTTTCAGG-TTTTAG-AAATAC--CA--TAAA----CTGCAAAAGG-TT-TCCATGGCTGAAT-TT------------------ATTAGCTATCC-T--TTAGCT-GAGAAT---TAGC----ACGCGTTATATTAT--GTTGT-T----A-------------------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 6
s Ellobius_talpinus.LOJH01109367.1                            3363 123 -      6299 GACATTCCAG--AGCC-AGTTCTGCTTTCAGA-TTTTAG-AAATAC--CA--TCAA----CTGCAAAAGG-TT-TCCATGGCTGAAT-TT------------------ATTAGCTATCC-T--TTAGCT-GAGAAT---TAGC----ACGCATTATATTAT--GTTGT-T----A-------------------------------
i Ellobius_talpinus.LOJH01109367.1                       C 0 I 6
s Enhydra_lutris.KZ291758.1                               16327464 140 -  41312741 GCCATTCCAG--AGT-TCAATCTACTTTTAGA-TATAAG-AAATAT--TAT-CAAA----AG-CCAAAGG-TTC-CT-ATGCTAAAC-TG------------------ATTAGCCATT-CC--TCctct-gag--tt--tagt----atttattgcattat--attat-g----att-t-tct----gttta----t-t-ggctcc
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1281482 138 +   4378816 GCCATTCTAG--TGT-TGGTTCTGCTTTTAGA-TGTGAG-AAATAT--TCT-CAAA----AG-CTAAAGG-TTT-CT-ATGCTAGAC-TG------------------ATTAGCCATT-CC--TCCTTT-GAGA-TT--TAGT----ATATACCACAttct--actga-a----att-t-tct----gttta----t-t-g---gt
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18529303 138 -  39960074 GCCATTCTAG--TGT-TGGTTCTGCTTTTAGA-TGTGAG-AAATAT--TCT-CAAA----AG-CTAAAGG-TTT-CT-ATGCTAGAC-TG------------------ATTAGCCATT-CC--TCCTTT-GAGA-TT--TAGT----ATATACCACAttct--actga-a----att-t-tct----gttta----t-t-g---gt
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               31318 138 +    498745 GCCATTCTAG--TGT-TGGTTCTGCTTTTAGA-TGTGAG-AAATAT--TCT-CAAA----AG-CTAAAGG-TTT-CT-ATGCTAGAC-TG------------------ATTAGCCATT-CC--TCCTTT-GAGA-TT--TAGT----ATATACCACAttct--actga-a----att-t-tct----gttta----t-t-g---gt
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21202308 130 -  21539334 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-ATGCCGAAC-TG------------------CGTAGCCATTC-T--CCCTCT-GAGA-C----AGC----ATGAACCACAT-----ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              11524 134 -     14127 GCTATTCCAG--AATC-AGCTCTACTTTTAGT-TAGGAG-AAATAC--TAT-GAAC----AG-CTAAAGG-CCT-CC-ACACTAA-T-TG------------------ATTAGCCATTC-C--TCCTCT-GAGA-TT--TAGT----ATTTGCC--ATTAT--ATTGC-A----A-TTT-T-T----GTTTA----T-T-G---GT
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                4222 134 -     16928 GCTATTCCAG--AATC-AGCTCTACTTTTAGT-TAGGAG-AAATAC--TAT-GAAC----AG-CTAAAGG-CCT-CC-ACACTAA-T-TG------------------ATTAGCCATTC-C--TCCTCT-GAGA-TT--TAGT----ATTTGGC--ATTAT--ATTGC-A----A-TTT-T-T----GTTTA----T-T-G---GT
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              13258 135 -     25546 GCTATTCCAG--AATC-AGCTCTACTTTTAGA-TAGGAG-AAATAC--TAT-GAAC----AG-CTAAAGG-CCT-CC-ACACTAAAT-TG------------------ATTAGCCATTC-C--TCCTCT-GAGA-TT--TAGT----ATTTGTC--ATTAT--ATTAC-A----A-TTT-T-T----GTTTA----T-T-G---GT
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            10448 135 +     26330 GCTCTTCCAG--AATC-AGCTCTACTTTTAGA-TAGGAG-AAATAC--TAT-GAAC----AG-CTAAAGG-CCT-CC-ACACTAAAT-TG------------------ATTAGCCATTC-C--TCCTCT-GAGA-TT--TAGT----ATTTGCC--ATTAT--ATTGC-A----A-TTT-T-T----GTTTA----T-T-G---GT
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 11688 134 +     23973 GCTATTCCAG--AATC-AGCTCTACTTTTAGT-TAGGAG-AAATAC--TAT-GAAC----AG-CTAAAGG-CCT-CC-ACACTAA-T-TG------------------ATTAGCCATTC-C--TCCTCT-GAGA-TT--TAGT----ATTTGGC--ATTAT--ATTGC-A----A-TTT-T-T----GTTTA----T-T-G---GT
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                10448 135 +     75513 GCTCTTCCAG--AATC-AGCTCTACTTTTAGA-TAGGAG-AAATAC--TAT-GAAC----AG-CTAAAGG-CCT-CC-ACACTAAAT-TG------------------ATTAGCCATTc-c--tcctct-gaga-tt--tagt----atttgcc--attat--attgc-a----att-t-t-t----gttta----t-t-g---gt
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  8391 134 +     97555 GCTATTCCAG--AATC-AGCTCTACTTTTAGT-TAGGAG-AAATAC--TAT-GAAC----AG-CTAAAGG-CCT-CC-ACACTAA-T-TG------------------ATTAGCCATTc-c--tcctct-gaga-tt--tagt----atttgcc--attat--attgc-a----att-t-t-t----gttta----t-t-g---gt
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            11326 135 +     26496 GCTATTCCAG--AATC-AGCTCTACTTTTAGA-TAGGAG-AAATAC--TAT-GAAT----AG-CTAAAGG-CCT-CC-ACACTAAAT-TG------------------ATTAGCCATTC-C--TCCTCT-GAGA-TT--TAGT----ATTTGCC--ATTAT--ATTGC-A----A-TTT-T-T----GTTTA----T-T-G---GT
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  1924 134 -     17153 GCTATTCCAG--AATC-AGCTCTACTTTTAGT-TAGGAG-AAATAC--TAT-GAAC----AG-CTAAAGG-CCT-CC-ACACTAA-T-TG------------------ATTAGCCATTC-C--TCCTCT-GAGA-TT--TAGT----ATTTGGC--ATTAT--ATTGC-A----A-TTt-t-t----gttta----t-t-g---gt
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              11500 134 +    111500 GCTATTCCAG--AATC-AGCTCTACTTTTAGT-TAGGAG-AAATAC--TAT-GAAC----AG-CTAAAGG-CCT-CC-ACACTAA-T-TG------------------ATTAGCCATTc-c--tcctct-gaga-tt--tagt----atttacc--attat--attgc-a----att-t-t-t----gttta----t-t-g---gt
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20235324 137 + 206538554 -CCATTTCAG--AGT-TCATTCTGCTTTTAGA-CATGAG-AAATAT--GAT-CAAA----AG-CCAAAAG-TTT-CT-ATGTTAAAC-TG------------------ATCAGCTATT-cc--tcctct-gaga-tt--cagt----attgaccatattat--attac-a----att-t-tct----gatta----t-t-g---at
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20194167 137 + 205367284 -CCATTTCAG--AGT-TCATTCTGCTTTTAGA-CATGAG-AAATAT--GAT-CAAA----AG-CCAAAAG-TTT-CT-ATGTTAAAC-TG------------------ATCAGCTATT-CC--TCCTCT-GAGA-TT--CAGA----ATTGACCATATTAT--ATTAC-A----A-TTT-TCT----GATTA----T-T-G---AT
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  7681 137 -     36744 -CCATTTCAG--AGT-TCATTCTGCTTTTAGA-CATGAG-AAATAT--GAT-CAAA----AG-CCAAAAG-TTT-CT-ATGTTAAAC-TG------------------ATCAGCTATT-CC--TCCTCT-GAGA-TT--CAGT----ATTGACCATATTAT--ATTAC-A----A-TTT-TCT----GATTA----T-T-G---AT
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     424058 138 -    453645 gccaccgcAGCTAATC-AGTTCTGCTTTTAAA--AGGAG-AAATAC--TAT-GAAT----AG-CAAAAGA-CCT-CC-ATGCCAAAT-TG------------------ATCAGCTATTT-C--TTCTCT-GAGA-TT--tagc----atttatc--attac--atcac-a----act-t-tttt---gttca----t-t-g---gt
i Galago_moholi.ctg2040                                  I 303 C 0
s Galago_senegalensis.k141_631886                             1765 138 +     11339 gccaccgcAGCTAATC-AGTTCTGCTTTTAAA--AGGAG-AAATAC--TAT-GAAT----AG-CAAAAGA-CCT-CC-GTGCCAAAT-TG------------------ATCAGCTATTT-C--TTCTCT-GAGA-TT--TAGC----ATTTATC--ATTAC--ATCAC-A----A-CTT-TTT---TGTTCA----T-T-G---GT
i Galago_senegalensis.k141_631886                        I 303 C 0
s Galagoides_demidoff.k141_1959596                            5572 138 +      6795 gccactgcAGCCAATC-AGTTCTGCTTTTAGA--AGGAG-AAATAC--TAT-AAAT----AG-CAAAAGG-CCT-CC-ATGCCAAAC-TG------------------ATCAGCTATTT-C--TTCGCT-GAGA-CT--TAGT----ATTTATC--ATTAC--ATCGC-A----A-CTT-TTT---TGTTTA----T-T-G---AT
i Galagoides_demidoff.k141_1959596                       I 303 C 0
s Galeopterus_variegatus.GalVar_scaffold_197845               1780 103 -      3123 ----------------------------------------AAATGC--TAT-CAAC----AG-CTAAAGG-TCT-CC-ACACTAAAC-CA------------------ATTAGTCATTC-C--TCCTCT-GAAA-TG--TAGT----ATTTACCACATTAC--ATTGA-A----A-TTT-TTT----GTTTA----T-T-G---GT
i Galeopterus_variegatus.GalVar_scaffold_197845          I 80 C 0
s Gorilla_beringei.k141_3596273                              13070 135 -     32273 GCCATTCCAG--AGTC-AGTTCTGCTTTTAGA-TATGAG-AAATAC--TAA-TAAC----AC-TTAAAGG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-C--CCCTCT-GAGA-TT--TAGC----ATGAACCACATTAT--ATTGC-A----A---T-TGT----ATTTA----T-T-G---GT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186335218 135 + 186649187 GCCATTCCAG--AGTC-AGTTCTGCTTTTAGA-TATGAG-AAATAC--TAA-TAAC----AC-TTAAAGG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCattc-c--ccctct-gaga-tt--tagc----atgaaccacattat--attgc-a----a---t-tgt----attta----t-t-g---gt
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   32248 126 +     78134 GCCATTCCCA--AGTC-TGTTCT------------GGAG-AATTAC--TA-CCAAT----CA-TTGAAGG-TTA-CC-ACACTAAAC-TT------------------ATTAGCCATTT-C--TCCTCC-GAAA-T-T-TAGT----ATCTGTCACATTAT--CTGGC-A----A-CTT-T-T----GTCGA----C-T-G---GT
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           4578 134 -     19426 GCTGTTCCAG--AATT-AGCTCTACTTTTAGA-TAGGAG-AAATAC--TTT-GAAC----AG-CTAAAGC-CCT-CC-ACACTAAAT-TG------------------ATT-GTCATTC-C--TCCTCT-GAGA-TT--TAGT----ATTTACC--ATTAT--ATTGC-A----A-TTT-T-T----GTTTA----T-T-G---GT
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              9727 134 -     15286 GCTGTTCCAG--AATC-AGCTCTACTTTTAGG-TAGGAG-AAATAC--TTT-GAAC----AG-CTAAAGC-CCT-CC-ACACTAAAT-TG------------------ATT-GTCATTC-C--TCCTCT-GAGA-TT--TAGT----ATTTACC--ATTAT--ATTGC-A----A-TTT-T-T----GTTTA----T-T-G---GT
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             11366 134 +     18253 GCTGTTCCAG--AATT-AGCTCTACTTTTAGA-TAGGAG-AAATCC--TTT-GAAC----AG-CTAAAGC-CCT-CC-ACACTAAAT-TG------------------ATT-GTCATTC-C--TCCTCT-GAGA-TT--TAGT----ATTTACC--ATTAT--ATTGC-A----A-TTT-T-T----GTTTA----T-T-G---GT
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         11467 134 -     41752 GCTGTTCCAG--AATC-AGCTCTACTTTTAGA-TAGGAG-AAATAC--TTT-GAAC----AG-CTAAAGC-CCT-CC-ACACTAAAT-TG------------------ATT-GTCATTC-C--TCCTCT-GAGA-TT--TAGT----ATTTACC--ATTAT--ATTGC-A----A-TTT-T-T----GTTTA----T-T-G---GT
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         11305 134 -     16460 GCTGTTCCAG--AATT-AGCTCTACTTTTAGA-TAGGAG-AAATAC--TTT-GAAC----AG-CTAAAGC-CCT-CC-ACACTAAAT-TG------------------ATT-GTCATTC-C--TCCTCT-GAGA-TT--TAGT----ATTTACC--ATTAT--ATTGC-A----A-TTT-T-T----GTTTA----T-T-G---GT
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               240483 138 +    327341 GCCATTTCAG--ACT-TCATTCTACTTTCAGA-CATGAG-AAATAT--TAT-CAAA----AG-CCAAAAG-TTT-CT-ATGCTAAAC-TG------------------ATTGGCTATT-CC--TCCTCT-GAGA-TT--TAGT----ATTGACCATATTAT--ATTTC-A----A-TTT-TCT----GATTA----T-T-G---AT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 491 103 +       961 --------------------------------------A-AAATAT--TAT-CAAA----AG-CTAAGGG-TCT-CA-GTGCTAAAC-TG------------------ATTACTCATTC-C----TCCTTGAGACT---TAGA----ATTTACCACGTTAT--ATGTt-a----act-g-ttt----gttta----t-t-a---gt
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       109962 136 +   1711038 GCCATTCCAG--AGCC-AGCTctgcttttaaa-tatatg-aacTAT--TAT-TGAA----AG-CTGAAGG-T-T-CT-ATGCAACAC-TG------------------ACTAGCCATT--C--TCCTCT-GAGA-TT--tagt----atttaccatgtt--atattac-a----at-at-ttg----gttta----t-c-g---gt
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               41385 136 +     43066 GCCATTCCAG--AGCT-AGCTCTGCTTTTAGA-TATACG-AACTAT--TAT-TGAA----AG-CTGAAGG-T-T-CT-ATGCAACAC-TG------------------ACTAGCCATT--C--TCCAAT-AAGA-TT--TAGT----ATTTACCATGCT--ATATTAC-A----A-TAT-TCG----GTTTA----T-C-G---GT
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    431884 132 +    630532 GCCATTCCAG--AGTC-AGTTCTGCTTTTAGA-TATGAG-AAATAC--TA----AC----AC-CTAAAGG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-C--CCCTCT-GAGA-TT--TAGC----ATGAACCACACTAT--ATTGC-A----G---T-TGT----ATTTA----T-T-G---GT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  42612 135 +     55795 GTCATTTCAG--AGT-TCATTCTACTTTTAGA-TAGGAG-AAATTT--TAT-CAAA----AG-CCATAAG-TTT-CT-ATGCTAAAC-TG------------------ATTGGCTATT-TT--GCCTCT-GAGA-TT--TAGT----ATCGACCATA---T--ATTTC-A----C-TTT-TCT----GATTA----T-T-G---AT
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_307679                               14818 135 -     15490 GCCATTCCAG--AGTC-AGTTCTGCTTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAAAGG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-C--CCCTCT-GAGA-TT--TAGC----ATGAACCACATTAT--ATTGC-A----A---T-TGT----ATTTA----T-T-G---GT
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              56824 135 +     67168 GCCATTCCAG--AGTC-AGTTCTGCTTTTAGA-TATGAG-AAATAC--TAC-TAAC----AT-CTAAAGG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-C--CCCTCT-GAGA-TT--TAGC----ATGAACCACATTAT--ATTGC-A----A---T-TGT----ATTTA----T-T-G---GT
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189540474 135 - 191637585 GGCATTCCAG--AGTC-AGTTCTGCTTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAAAGG-CCT--C-GTGCTGAAC-TG------------------AGTAGCCATTC-C--CCCTCT-GAGA-TT--TAGC----ATGAACCACATTAT--ATTGC-A----A---T-TGT----ATTTA----T-T-G---GT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3333368 135 -  11177569 GCCATTCCAG--AGTC-AGTTCTGCTTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAAAGG-CCT--C-GTGCTGAAC-TG------------------AGTAGCCATTC-C--CCCTCT-GAGA-TT--TAGC----ATGAACCACATTAT--ATTGC-A----A---T-TGT----ATTTA----T-T-G---GT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7517433 141 -   7955117 GCCACTCCAG--AGTC-TGTTCTGCATctagt-taaaaa-taatac--tat-CAAT----AG-CTAAGGA-TTAT-C-ACACTAAAT-TT------------------ATTAGCCATCC-C--TCCTCT-GAGA-TT--tagt----atctatcatactat--cttat-a----att-ttt-ttt-cattta----t-t-g---gt
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   20270 136 +     31101 GCCATTCCAG--AGTC-AGTTCTACTTTTGAA-TTGGAG-AAATAC--TAT-GAAC----AG-CTAAAGG-CCT-CC-ACACTAAAT-TG------------------ATTAGCCATTC-C--TCCTCT-GAGA-TT--TAGT----ATTTACC--ATTAT--ATTGC-A----atttt-t-t----gttta----t-t-g---gt
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8276347 135 -   9596543 GCCATTCCA-----TC-AGCTGTGCATGTAGA-TAGAAG-AAATGT--TA--TGAG----CAGCACAAAA-TGT-GC-ACACAAAAT-GT------------------ATTAGCCATTC-C--TTGTCT-GAGATG---TAGT----GTTTGCGACAGCAC--ATCAC-A----A-TTT-T-T--CAGTT-A----T-T-G---TT
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lemur_catta.scaffold_24                                 15521829 134 -  30322482 GCTGTTCCAG--AATC-AGCTCTACTTTTAGA-TAGGAG-AAATAC--TTT-GAAC----AG-CTAAAGC-CCT-CC-ACACTAAAT-TG------------------ATT-GTCATTc-c--tcctct-gaga-tt--tagt----atttacc--attat--attgc-a----att-t-t-t----gttta----t-t-g---gt
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        4821 134 +     64341 GCCATTCCAG--AGTC-ACTTCTGCCTTTAGA-TATGGG-GAATAC--TGC-TAAC----AC-CTCA-GG-TCT--C-ATGCTGAAC-GG------------------ATCAGCCACTC-C--TCCTCT-GAGA-TT--TAGC----ATGAGCCACATTCT--ATTGC-A----A---T-TGT----GATTA----T-T-G---GT
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           1881 134 +      4941 GCCATTCCAG--AGTC-ACTTCTGCCTTTACA-TATGGG-GAATAC--TGC-TAAC----AC-CTCA-GG-TCT--C-ATGCTGAAC-GG------------------ATCAGCCACTC-C--TCCTCT-GAGA-TT--TAGC----ATGAACCACATTCT--ATTGC-A----A---T-TGT----GATTA----T-T-G---GT
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4749 134 +     35603 GCCATTCCAG--AGTC-ACTTCTGCCTTTAGA-TAGGGG-GAATAC--TGC-TAAC----AC-CTCA-GG-TCT--C-ATGCTGAAC-AG------------------ATCAGCCACTC-C--TCCTCT-GAGA-TT--TAGC----ATGAACCACATTCT--ATTGC-A----A---T-TGT----GATTA----T-T-G---GT
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    26221 134 +     38576 GCCATTCCAG--AGTC-ACCTCTGCCTTTAGA-TATGAG-GAATAC--TGC-TAAC----AC-CTCA-GG-CCT--C-ATGCTGAAC-AG------------------ATCAGCCACTC-C--TCCTCT-GAGG-TT--CAGC----ATGAACCACATTCT--CTTGC-G----A---T-TGT----GATTA----T-T-G---GT
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         22918 134 +     66356 GCCATTCCAG--AGTC-ACCTCTGCCTTTAGA-TATGAG-GAATAC--TGC-TAAC----AC-CTCA-GG-CCT--C-ATGCTGAAC-AG------------------ATCAGCCACTC-C--TCCTCT-GAGG-TT--CAGC----ATGAACCACATTCT--CTTGC-G----A---T-TGT----GATTA----T-T-G---GT
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          8708 136 -     23766 GCCATTCCAG--AATC-AGCTCTATTTTTAGA-TAGGAG-AAATAC--TAT-GAAC----AG-CTAAAGG-CCTT-C-ACACTAAAT-TG------------------ATTAGCCATTC-C--TCCTCT-GAGA-TT--TAGT----ATTTACC--ATTAT--ATTGC-A----ATTTT-T-T----GTTTA----T-T-G---GT
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             26655 136 +     45836 GCCATTCCAG--AATC-AGCTCTATTTTTAGA-TAGGAG-AAATAC--TAT-GAAC----AG-CTAAAGG-CCTT-C-ACACTAAAT-TG------------------ATTAGCCATTC-C--TCCTCT-GAGA-TT--TAGT----ATTTACC--ATTAT--ATTGC-A----ATTTT-T-T----GTTTA----T-T-G---GT
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_320948                           879 136 -      1719 GCCATTCCAG--AATC-AGCTCTACTTTTAGA-TAGGAA-AAATAC--TAT-GAAC----AG-CTAAAGG-CCTT-C-ACACTAAAT-TG------------------ATTAGCCATTC-C--TCCTCT-GAGA-TT--TAGT----ATTTACC--ATTAT--Attgc-a----atttt-t-t----gttta----t-t-g---gt
i Lepilemur_ruficaudatus.k141_320948                     I 4 C 0
s Lepilemur_septentrionalis.k141_185316                      24710 136 +     54090 GCCATTCCAG--AATC-AGCTCTATTTTTAGA-TAGGAG-AAATAC--TAT-GAAC----AG-CTAAAGG-CCTT-C-ACACTAAAT-TG------------------ATTAGCCATTC-C--TCCTCT-GAGA-TT--TAGT----ATTTACC--ATTAT--ATTGC-A----ATTTT-T-T----GTTTA----T-T-G---GT
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.APMU01168965.1                       249 138 -      1094 GCCATTCCAG--AGT-TCATTCTACTCTTAGA-TATGAG-AAATAT--TAT-CAAA----AG-CCAAAGG-TTT-CT-ATGATAAAC-TG------------------ATTAGCCATT-CT--TCCTTT-GAGA-TT--TAGT----ATATACCACACtat--attgc-a----att-t-tct----gttta----t-t-g---ct
i Leptonychotes_weddellii.APMU01168965.1                 C 0 I 4
s Lepus_americanus.LepAme_scaffold_107385                     3774  70 -     14121 ---------------------------------------------------------------------------------CTAACT-TG------------------ATGAGCCATTC-C--TCTTCT-GAGA-TC--TAGT----ATTCAATGCATTTT--ATTGT-G----T-TTT-TTT---T----A----T-T-G---GT
i Lepus_americanus.LepAme_scaffold_107385                I 44 C 0
s Lophocebus_aterrimus.ctg367                              1434240 135 +   1826925 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-GTGCCGAAC-CG------------------AGTAGCCATTC-T--CCCCCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            3515 120 +     11245 gccattacagctgacc-AGTTCTGCTTTTAGA-TAGGAG-AAATAC--TAT-GAAC----AG-CAAAAGG-CCT-CC-TTGCCAAAT-TG------------------ATCAGCTATTT-C--TCCTCT-GAGA-TT--TAGT----ATTTATC--ATTAC--ACTAC--------------------------------------
i Loris_lydekkerianus.k141_2539221                       I 295 I 17
s Loris_tardigradus.ctg83                                  1002353 120 +   6120653 gccactacagctgacc-AGTTCTGCTTTTAGA-TAGGAG-AAATAC--TAT-GAAC----AA-CAAAAGG-CCT-CC-TTGCCAAAT-TG------------------ATCAGCTATTT-C--TCCTCT-GAGA-TT--TAGT----ATTTATC--ATTAC--ACTAC--------------------------------------
i Loris_tardigradus.ctg83                                I 295 I 17
s Loxodonta_africana.GL010049.1                            4214777 102 -  43346337 --------------------------------------G-AAATAC--TAC-CAAA----AG-CTAACGG-CCT-CA-ACTCTAAAG-TG------------------ATTATTCATTC-C----CTCTAGAGA-T---TAGG----ATTCACCACAttac--attgt-a----att-g-tct----gttta----t-t-g---gt
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17953404 138 -  59628241 GCTGTGCCAG--AGT-TCATTCTACTTTTAGA-TATGAG-AAATAT--TAT-CAAA----AG-CCAAAGG-TTT-CT-ATGCTAAAC-TG------------------ATTAGCTGTT-CC--TCCTCT-GAGA-TT--TAGT----ATTTGCCACAttat--attac-a----att-t-tct----gttta----t-t-t---at
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               4053 135 +     40492 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TGC-TAAC----AC-CTAACGG-CCT--C-ATGCCGAAC-CG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59673315 135 +  60120075 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-ATGCCGAAC-CG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  9809 135 -     26193 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TGC-TAAC----AC-CTAACGG-CCT--C-ATGCCGAAC-CG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAAC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            77613 135 -    114318 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAATGG-CCT--C-ATGCCGAAC-CG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  3372  75 -     23192 ----------------------------------------------------------------------------C-ATGCCGAAC-CA------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Macaca_fuscata.k119_255327                             I 52 C 0
s Macaca_leonina.k141_3550399                                12772 135 -     29190 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TGC-TAAC----AC-CTAACGG-CCT--C-ATGCCGAAC-CG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  21340 135 +     37952 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TGC-TAAC----AC-CTAACGG-CCT--C-ATGCCGAAC-CG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAG--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186836428 135 + 187317192 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TGC-TAAC----AC-CTAACGG-CCT--C-ATGCCGAAC-CG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25454991 135 -  25927173 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TGC-TAAC----AC-CTAACGG-CCT--C-ATGCCGAAC-CG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TTT----GTGTA----T-T-G---GT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  77189 135 +     89720 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TGC-TAAC----AC-CTAACGG-CCT--C-ATGCCGAAC-CG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAG--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 4186 135 +     20474 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-ATGCCGAAC-CG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACTTTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   3988 135 -     14993 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TGC-TAAC----AC-CTAACGG-CCT--C-ATGCCGAAC-CG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  326858 135 -    668171 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TGC-TAAC----AC-CTAACGG-CCT--C-ATGCCGAAC-CG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAG--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 2298 135 -     24072 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-ATGCCGAAC-CG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               22927 135 -     45290 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TGC-TAAC----AC-CTAACGG-CCT--C-ATGCCGAAC-CG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAG--ACTGC-A----A---T-TGT----GTGTA----T-T-G---TT
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88748 138 +     94391 GCCATTTCTG--AGTC-AGTTCTGCTTTTAGA-TACAGA-AAATGT--CAT-AGAA----AG-CTGAAGG-TTT-CT-ATGTGACAC-TG------------------ATTAGCCATT--C--TCCTTT-GAGA-TT--TAGT----ATTTACCACATT----GTTAC-A----A-TCT-TCT----TTTTA----C-T-GGTGGT
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23934514 135 -  24302211 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TAGGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-ATGCCGAAC-CG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--GAGC----ATGAACCGCATTAC--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               348647 135 +    752769 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TAGGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-ATGCCGAAC-CG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--GAGC----ATGAACCGCATTAC--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              17600 140 +    737560 GCCATTCCAG--AGT-CGGTTCtccttttaaa-tattag-aaatat--caT-CAAA----AG-CTAAAGG-TTT-CC-ATGCTAAAT-TG------------------ATTAGCCATT-CC--TCCTCT-GATA-TT--TAGA----ATTTAGGCCA-tgt--atcgc-a----at-at-tct----gtttg-ttgt-t-g---gt
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              48986 140 -    317179 GCCATTCCAG--AGT-CGGTTCtccttttaaa-tatgag-aaatat--cAT-CAAA----AG-GTAAAGG-TTT-CC-ATGCTAAAT-TG------------------ATTAGCTATT-CC--TCCTCT-GATA-TT--TAGA----ATTTAGGCCA-tgt--atcgc-a----at-at-tct----gtttg-ttgt-t-g---gt
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33099745 140 -  40650429 GCCACTCCAG--AGTC-TGTTCTGCATctagt-taaaaa-taatac--tat-caAT----AG-CTAAGAA-TTAT-C-ACACTAAAT-TT------------------Attagacatcc-c--tcctct-gaga-tt--tagt----atctatcatactat--cttat-a----att-t-t-ttt-cattta----t-t-g---gt
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         8498 137 -    207569 ACCTTTCCAG--AGCC-AGTTCTGCTTTTAGA-TATGTG-AAATAT--TGT-TGAA----AG-TTAAAGG-TGT-CT-ATGCTACAC-Tg------------------attagccatt--c--tcctca-gaga-gt--tcgt----atttaccacatt--atgttac-a----att-t-tct----gttta----t-t-g---gt
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              8180 141 +     13704 GCCATTCCAG--AGT-TCAATCTTCTTTTAGA-TATGAG-AAATAT--TAT-CAAA----AG-CCAAAGG-TTT-CT-ATGCTAAAC-TG------------------ATTAGCCATT-CC--TCCTCT-GAGA-TT--tagt----atttaccacattat--attat-g----att-t-tct----gttta----t-t-ggctcc
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 29709 120 +    140813 GACATTCCAG--AGTC-AGTTCTGCTTTCAAG-TTTTAG-AAAGAC--CA--GCAA----AAGCAAAA-GGTT-TCC-CCACTGGAC-TA------------------ATTAGCCATAC-T--TGAGC---AGATT---TAGT----GTCGTTCATAGTAC--ATTGC-T----T-------------------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 2
s Mesocricetus_auratus.KB708134.1                         12180181 122 -  29670104 GACATTCCAG--AGTC-AGTTCTGCTTTCAGA-TTTCAG-AAATGT--CA--TCAA----TAGCAAAAGG-TT-TTC-TGACCAAAT-GT------------------ATTAGCCATCC-T--GTAAGT-GAGAGT---TTGC----ACTTGTCATAATAC--CATGA-T----A-------------------------------
i Mesocricetus_auratus.KB708134.1                        C 0 I 6
s Mico_argentatus.k141_1239457                                3006  80 -      7380 GCCATTCCAG--AGTC-ACTTCTGCCTTCAGA-TATGGG-GAATAC--AGC-TAAC----AC-CTCA-GG-CCT--C-ACGCTGAAC-GG------------------ATCAGCCAC-----------------------------------------------------------------------------------------
i Mico_argentatus.k141_1239457                           C 0 I 51
s Mico_humeralifer.k141_1976199                               2072  80 +     18990 GCCATTCCAG--AGTC-ACTTCTGCCTTCAGA-TATGGA-GAATAC--AGC-TAAC----AC-CTCA-GG-CCT--C-ACGCTGAAT-GG------------------ATCAGCCAC-----------------------------------------------------------------------------------------
i Mico_humeralifer.k141_1976199                          C 0 I 51
s Mico_schneideri.k141_1950671                                      3011  80 -      7356 GCCATTCCAG--AGTC-ACTTCTGCCTTCAGA-TATGGG-GAATAC--AGC-TAAC----AC-CTCA-GG-CCT--C-ACGCTGAAC-GG------------------ATCAGCCAC-----------------------------------------------------------------------------------------
i Mico_schneideri.k141_1950671                                 C 0 I 51
s Microcebus_murinus.CM007674.1                           18289214 136 -  93316391 GCCATTCCAG--AATC-AGCTCTACTTTTAGA-TAGGAG-AAATAC--TAT-GAAC----AG-CTAAAGG-CCTT-T-ACACTAAAT-TG------------------ATTAGCCATTT-C--TCCTCT-GAGA-TT--TAGT----ATTTACc--attat--attgt-a----atttt-t-t----gttta----t-t-g---gt
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    16117  39 -    145209 ---------------------------------------------------------------------------------------------------------------------------------------T---TACA----ATGTA---GATTAT--AGTGC-A----A-TTA-TCT----GTTTA----T-T-A---CT
i Microgale_talazaci.MicTal_scaffold_6613                I 218 C 0
s Microtus_ochrogaster.CM001695.1                         11257819 123 -  27267610 GACATTCCAG--AGCC-AGTTCTGCTTTCAAA-TTTTAG-AAATAC--CA--TCAT----CTGCAAAAGG-TT-ACCGTGGCTGAAT-TT------------------ATTAGCTCTCC-T--TTAGCT-GAGAGT---TACC----ATGCATTACAGTAT--GTTGT-T----A-------------------------------
i Microtus_ochrogaster.CM001695.1                        C 0 I 6
s Miopithecus_ogouensis.k141_534055                           6234 135 -     28506 GCCATTCCAG--AGTC-TGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAATGG-CCT--C-ATGCTGAAC-CG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGGACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         3663 138 -      8324 GCCATTCCAG--AGT-TCATTCTACTCTTAGA-TATGAG-AAATAT--TAT-CAAA----AG-CCAAAGG-TTT-CT-ATGATAAAC-TG------------------ATTAGCCATT-CC--TCCTCT-GAGA-CT--TAGT----ATATACCACACtat--attgc-a----att-t-tct----gttta----t-t-g---ct
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 4
s Mirza_zaza.k141_952172                                      6787 136 -     37649 GCCATTCCAG--AATC-GGCTCTACTTTTAGA-TAGGAG-AAATAC--TAT-GAAC----AG-CTAAAGG-CCTT-T-ACACTAAAT-TG------------------ATTAGCCATTc-c--tcctct-gaga-tt--tagt----atttacc--attat--attgt-a----atttt-t-a----gttta----t-t-g---gt
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 139447 136 -    366855 TCCATTCCAG--AGT--GGTGTTACTTTTAGA-TACAGGAA-ATAT--TAT-CAAA----AGC-TGAAGG-TTT-AT-ATGCTGCAC-TG------------------ATTAGCCATT--C--TCCTCT-GAGA-TT--TAGT----ATTTACTACATTAT--GTGGC-A----A-TTT-TAT----GTTTA----T-T-G---GT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   33590 138 +     37127 ACCATTTCAG--ACT-TCATTCTACTTTCAGA-CATGAG-AAATAT--TAT-CAAA----AG-CCAAAAG-TTT-GT-ATGCTAACC-CG------------------ATTGGCTATT-CC--TCCTCT-GAGA-TT--TAGT----ATTGACCATATTAT--ATTTC-A----A-GTT-TCT----GATTA----T-T-G---AT
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Mus_caroli.LT608237.1                                   84358794 122 - 120012414 GACATTCCAG--AGTC-CCTCCTGCTTTCAAT-TTTTAG-AAATAC--CA--TCAA----CAATAAGAGG-TT-TCC-ACACTGAAC-TA------------------ATTAGCTCTCC-T--TTAGCT-GAGACT---AAGT----GCTTAGCATAGCAC--ATTGC-T----A-------------------------------
i Mus_caroli.LT608237.1                                  C 0 I 6
s Mus_musculus.chr8                                       87647783 122 - 129401213 GACATTCTAG--AGTC-CCTCCTGCTTTCAAT-TTTTAG-AAATAC--CA--TCAA----CAATAAGAGG-TT-TCC-ACGCTGAAC-TA------------------AATAGCTCTCC-T--TTAGCT-GAGACT---AAGT----GCTTAGCATAGCAC--ATTGC-T----A-------------------------------
i Mus_musculus.chr8                                      C 0 I 6
s Mus_pahari.LT608297.1                                   31352069  56 -  89631738 GACATTCCAG--AGCC-CCTCCTGCTTTCAAT-TTTTAG-AAATAT--CA--TCAA----CAATAAAAG-----------------------------------------------------------------------------------------------------------------------------------------
i Mus_pahari.LT608297.1                                  C 0 I 64
s Mus_spretus.CM004101.1                                  90749861 122 - 130317789 GACATTCCAG--AGTC-CCTCCTGCTTTCAAT-TTTTAG-AAATAC--CA--TCAA----CAATAAGAGG-TT-TCC-ACGCTGAAC-TA------------------AATAGCTCTCC-T--TTAGCT-GAGACT---AAGT----GCTTAGCATAGCAC--ATTGC-T----A-------------------------------
i Mus_spretus.CM004101.1                                 C 0 I 6
s Muscardinus_avellanarius.MusAve_scaffold_82313              4528 135 +     14296 GCTATTCCAG--AGTC-TTTTCTACTTTTAGA-TAGGAG-AAATAC--TG--CAAT----CA-CTGAAAG-TTA-CC-ATGCTAAAC-TT------------------ATTAGCCATTC-C--TCCTTT-GAGA-T---TAAT----ATATGCCACATTAT--TTGGT-A----A-CTT-C-T----GTTGA----A-T-G---TT
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               299361 141 -  14710649 GCCATTCCAG--AGT-TCAATCTACTTTTAGA-TATAAG-AAATAT--TAT-CAAA----AG-CCAAAGG-TTT-CT-ATGCTAAAC-TG------------------ATTAGCCATT-TC--TCCTCT-GAGA-TT--tagt----atttaccacattat--attat-g----att-t-tct----gttta----t-t-ggctct
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              186928 136 +    196477 GCCACACCAA--GAT-CAGTTCTGCTTTTTGA-TATGAG-AAATAT--TAC-CAAA----AG-CTAAATG-TCT-CA-ACTCTAAAC-TG------------------AC-AGCCACTC-C--ACCTCA-GAGA-T---TTAG----ATTTACCACcttat--gtagg-a----att-g-tct----gttta----t-t-t---ga
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nasalis_larvatus.k141_413338                               12230 135 +     21681 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACAG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    758045 137 +    783361 GTCATTCCAG--AGT--GGTGTAAATTTTAAA-GACAGG-AAATAT--TAT-CAAG----GG-CTGAAGG-TTT-AT-ATGCTACACTTG------------------ATCAGCCATT--C--TCCTCT-GAGA-TT--GAAT----ATTTACCATATTAT--GTGAC-C----A-TTT-TCT----GTTTA----T-T-G---GT
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9147662 138 -   9404916 GCTGTGCCAG--AGT-TCATTCTACTTTTAGA-TATGAG-AAATAT--TAT-CAAA----AG-CCAAAGG-TTT-CT-ATGCTAAAC-TG------------------ATTAGCCGTT-CC--TCCTCT-GAGA-TT--TAGT----ATTTCCCACAttat--attac-a----att-t-tct----gttta----t-t-t---at
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102577270 143 - 196305487 gccactgcagccgacc-aGTTCTGCTTTTAGA-TAGGAG-AAATAC--TAT-GAAA----AA-CAAAAAG-CCT-CC-ATGCCAAAT-TG------------------ATTAGCTATTT-C--TCCTCT-GAGA-TT--tagt----atttatc--attac--attac-attacatt-t-tttt---gttta----t-c-g---gt
i Nycticebus_bengalensis.LG01                            I 276 C 0
s Nycticebus_coucang.k141_5327727                             4956 143 +      8486 gccactgcagccgacc-agttctGCTTTTAGA-TAGGAG-AAATAC--TAT-GAAA----AA-CAAAAAG-CCT-CC-ATGCCAAAT-TG------------------ATTAGCTATTT-C--TCCTCT-GAGA-TT--tagt----atttatc--attac--attac-attacatt-t-tttt---gttta----t-c-g---gt
i Nycticebus_coucang.k141_5327727                        I 276 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105747697 143 + 199412804 gccactgcagccgacc-AGTTCTGCTTTTAGA-TAGGAG-AAATAC--TAT-GAAC----AA-CAAAAGG-CCT-CC-ATGCCAAAT-TG------------------ATTAGCTATTT-C--TCCTCT-GAGA-TT--tagt----atttatc--attac--attac-attacatt-t-tttt---gttta----t-c-g---gt
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 276 C 0
s Ochotona_princeps.JH802162.1                             1360789 138 +   3988456 ----TCCCAG--AGTC-AGCCCTACTTTGGGA-AGTGAA-AGCCGC--TGT-TAAC----CG-GAATACA-TTC-CC-ACTCTCAAC-AG------------------ATGAGCTACTC-C--TCTTTT-GAGG-TC--TAGC----ATTCAGTGCattgt--attat-a----att-t-ttttttcattga----t-t-g---gt
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              504751 138 -   2017862 GCCATTCCAG--AGT-TCATTCTACTCTTAGA-TATGAG-AAATAT--TAT-CAAA----AG-CCAAAGG-TTT-CT-ATGCTAAAC-TG------------------ATTAGCCATT-CT--TCCTCT-GAGA-TT--TAGT----ATTTACCACACTAT--ATTGC-A----A-TTT-TCT----GTTTA----T-C-A---CC
i Odobenus_rosmarus.KB229312.1                           C 0 I 4
s Ondatra_zibethicus.OndZib_scaffold_46174                   21935 123 +     28053 AATATTCCAG--AGCC-AGTTCTGTTTTCAGA-TTTTAG-AAATAC--CA--TCAA----CTGCAAAAGG-TT-TCCATGGCTGAAT-TT------------------ATTAGCCATCC-T--TTAGCT-GAGAGT---TAGC----ACGCATTATATTAT--GTTGT-T----A-------------------------------
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 6
s Onychomys_torridus.OnyTor_scaffold_2986                    77011 121 +    102263 GACATTCCAG--ACTC-AGTTCTGCTTTCAGA-TTTTAG-AAATGT--CA--TCAA----CAGCAAAAGG-TT-CCC-AGGCTGAAT-TC------------------ATTAG-CATCC-T--TTAACT-GAGGGT---TAGC----ACTTATCATAGTAC--ACTGC-A----A-------------------------------
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 6
s Orycteropus_afer.OryAfe_flattened_line_144387               7369  42 -     18566 ---------------------------------------------------------------------------------------------------------------------------------------T---TAGA----ATTtaccacattat--attgc-a----gtt-g-tct----gctca----t-t-a---gt
i Orycteropus_afer.OryAfe_flattened_line_144387          I 41 C 0
s Oryctolagus_cuniculus.CM000791.1                        67144618  71 + 174332312 ---------------------------------------------------------------------------------cTAAAC-TG------------------ATGAGCCATTC-C--TCCTCT-GAGA-TC--TAGT----ATTCAATGcattgt--attgt-a----ttt-tttttt-------a----t-t-g---gt
i Oryctolagus_cuniculus.CM000791.1                       I 44 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       460418 138 -    559221 GCTGTGCCAG--AGT-TCATTCTACTTTTAGA-TATGAG-AAATAT--TAT-CAAA----AG-CCAAAGG-TTT-CT-ATGCTAAAC-TG------------------ATTAGCCGTT-CC--TCCTCT-GAGA-TT--TAGT----ATTTGCCACAttat--attac-a----att-t-tct----gttta----t-t-t---at
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         1600 138 +      8798 gccaccgcAGCTAATC-AGTTCTGCTTTTAAA--AGGAG-AAATAC--TAT-GAAT----AG-CAAAAGA-CCT-CC-ATGCCAAAT-TG------------------ATCAGCTATTT-C--TTCTCT-GAGA-TT--TAGT----ATTTATC--ATTAC--ATCAC-A----A-CTT-TTT---TGTTTA----T-T-G---GT
i Otolemur_crassicaudatus.k141_222918                    I 303 C 0
s Otolemur_garnettii.GL873799.1                             693767 138 -   1103335 gccaccgcagcTAATC-AGTTCtgcttttaaa--aggag-aaatac--tAT-GAAT----AG-CAAAAGA-CCT-CC-ATGCCAAAT-TG------------------atcagctattt-c--ttctct-gaGA-TT--TAGT----ATTTATC--ATTAC--ATCAC-a----act-t-tttt---gttta----t-t-g---gt
i Otolemur_garnettii.GL873799.1                          I 303 C 0
s Pan_paniscus.KQ411613.1                                    41169 135 +     80009 GCCATTCCAG--AGTC-AGTTCTGCTTTTAGA-TATGAG-AAACAC--TAA-TAAC----AC-CTAAAGG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-C--CCCTCT-GAGA-TT--TAGC----ATGAACCACATTAT--ATTGC-A----A---T-TAT----ATTTA----T-T-G---GT
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189140079 135 + 189151597 GCCATTCCAG--AGTC-AGTTCTGCTTTTAGA-TATGAG-AAATAC--TAA-TAAC----AC-CTAAAGG-TCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-C--CCCTCT-GAGA-TT--TAGC----ATGAACCACATTAT--ATTGC-A----A---T-TGT----ATTTA----T-T-G---GT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  149333 137 +    230217 -CCATTTCAG--AGT-TCATTCTGCTTTTAGA-CATGAG-AAATAT--GAT-CAAA----AG-CCAAAAG-TTG-CT-ATGCTAAAC-CG------------------ATTAGCTATT-cc--tcctct-gaga-tt--cagt----attgaccatattat--attac-a----att-t-tct----gatta----t-t-g---at
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                262538 137 +  18783137 -CCATTTCAG--AGT-TCATTCTGCTTTTAGA-CATGAG-AAATAT--GAT-CAAA----AG-CCAAAAG-TTT-CT-ATGCTAAAC-TG------------------ATCAGCTATT-cc--tcctct-gaga-tt--cagt----attgaccatattat--attac-a----att-t-tct----gatta----t-t-g---at
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4719175 137 -   8748460 -CCATTTCAG--AGT-TCATTCTGCTTTTAGA-CATGAG-AAATAT--GAT-CAAA----AG-CCAAAAG-TTT-CT-ATGCTAAAC-TG------------------ATTAGCTATT-cc--tcctct-gaga-tt--cagt----attgaccatattat--attac-a----att-t-tct----gatta----t-t-g---at
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183440269 134 + 183742232 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-GTGCCGAAC-CG------------------AGTAGCCATTC-T--CTCTCT-GAGA-CT--TAGC----ATGA-CCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             3961 135 +     20448 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-GTGCCGAAC-CG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGC----GTGTA----T-T-G---GT
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20560767 135 +  20919399 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-GTGCCGAAC-CG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   2705 135 +     41871 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-GTGCCGAAC-CG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     5991 135 +     27711 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TGC-TAAC----AC-CTAACGG-CCT--C-GTGCCGAAC-CG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  6070 135 +      9205 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-GTGCCGAAC-CG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10799 138 -     78924 GCCATTTCAG--AGT-TCATTCTGCTTTTAGA-TATGAG-AAATAT--TAT-CAAA----AG-TCAAAAG-TTT-CT-ATACTAAAC-Tg------------------attagccatc-cc--tcctct-gaga-tt--tagt----attgaccatattat--attac-a----att-t-tct----gatta----t-t-g---gt
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            7739  87 +     13100 gccactgcagccgacc-AGTTCTGCTTTCAGA-TAGGAG-AAATAC--AAT-GAAC----AG-CAAAAGG-CCT-CC-ATGCCAAAT-TC------------------ATCA-----TT-C--TCCTC------------------------------------------------------------------------------
i Perodicticus_ibeanus.k141_855320                       I 295 I 39
s Perodicticus_potto.k141_1092580                             6112  92 +     25941 accactgcagccgacc-AGTTCTGCTTTCAGA-TAGGAG-AAATAC--AAT-GAAC----AG-CAAAAGG-CCT-CC-ATGCCAAAT-TC------------------ATCAGCtattt-c--tcctc------------------------------------------------------------------------------
i Perodicticus_potto.k141_1092580                        I 295 I 39
s Peromyscus_maniculatus.KI615324.1                       18191610 121 -  18517816 GACATTCCAG--ACTC-AGTTCTGCTTTCAGA-TTTTAG-AAATGT--CA--CCAA----CAGCAAAAGG-TT-CCC-AGGCTGAAT-TT------------------ATTAG-CATCC-T--TTAGCT-GAGAGT---TCGC----ACTTATCGTAGTAC--ATTGC-A----A-------------------------------
i Peromyscus_maniculatus.KI615324.1                      C 0 I 6
s Piliocolobus_badius.k141_1234363                           40793  80 +     62158 --------------------------------------------------------------------GG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAGCCACATTGT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Piliocolobus_badius.k141_1234363                       I 48 C 0
s Piliocolobus_gordonorum.k141_381342                        35467 135 +     89929 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAGCCACATTGT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            36883 135 +     51399 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAGCCACATTGT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14293121 135 -  14605196 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAGCCACATTGT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189128194 135 + 189387572 ACCATTCCAG--AGTC-AGTTCTGCTTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAAAGG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-C--CCCTCT-GAGA-TT--TAGC----ATGAACCACATTAT--ATTGC-A----A---T-TGT----ATTTA----T-T-G---GT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9567802 135 +   9816681 ACCATTCCAG--AGTC-AGTTCTGCTTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAAAGG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-C--CCCTCT-GAGA-TT--TAGC----ATGAACCACATTAT--ATTGC-A----A---T-TGT----ATTTA----T-T-G---GT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               70393 135 -     81375 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              2213 135 +     19060 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAATGG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 10240 103 -     22811 --------------------------------------A-AAATAT--TAT-CAAA----AG-CTAAGGG-TCT-CA-GTGCTAAAC-TA------------------ATTACTCATTC-C----TCCTTGAGACT---TAGA----ATTTACCACATTAT--ATGTt-a----act-g-ttt----gttta----t-t-a---gt
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2594479 134 -   4620579 GCTGTTCCAG--AATC-AGCTCTACTTTTAGA-TAGGAG-AAATAC--TTT-GAAC----AG-CTAAAGC-CCT-CC-ACACTAAAT-TG------------------ATT-GTCATTC-C--TCCTCT-GAGA-TT--TAGT----ATTTACC--ATTGT--ATtgc-a----att-t-t-t----gttta----t-t-g---at
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     988467 137 +   2598838 GCCATTCCAG--AGTc-agttctacttttaaaattggaG-AAATAC--TAT-GAAC----AG-CTAAAGG-CCT-CC-ACGCTAAAT-TG------------------ATTAGCCATTC-C--TCCTCT-GAGA-TT--TAGT----ATTTACC--ATTAT--ACTGC-A----AATTT-T-T----GTTGA----T-T-G---GT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          26777 137 +     38485 GCCATTCCAG--AGTC-AGTTCTACTTTTAAAATTGGAG-AAATAC--TAT-GAAC----AG-CTAAAGG-CCT-CC-ACGCTAAAT-TG------------------ATTAGCCATTC-C--TCCTCT-GAGA-TT--TAGT----ATTTACC--ATTAT--ACTGCAA----A-TTT-T-T----GTTGA----T-T-G---GT
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             2937 137 +      4256 GCCATTCCAG--AGTC-AGTTCTACTTTTAAAATTGGAG-AAATAC--TAT-GAAC----AG-CTAAAGG-CCT-CC-ACGCTAAAT-TG------------------ATTAGCCATTC-C--TCCTCT-GAGA-TT--tagt----atttacc--attat--actgc-a----atttt-t-t----gttga----t-t-g---gt
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          24297 137 +     35766 GCCATTCCAG--AGTC-AGTTCTACTTTTAAAATTGGAG-AAATAC--TAT-GAAC----AG-CTAAAGG-CCT-CC-ACGCTAAAT-TG------------------ATTAGCCATTC-C--TCCTCT-GAGA-TT--TAGT----ATTTACC--ATTAT--ACTGC-A----ATTTT-T-T----GTTGA----T-T-G---GT
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           2480 137 -     24134 GCCATTCCAG--AGTC-AGTTCTACTTTTAAAATTGGAG-AAATAC--TAT-GAAC----AG-CTAAAGG-CCT-CC-ACGCTAAAC-TG------------------ATTAGCCATTC-C--TCCTCT-GAGA-TT--TAGT----ATTTACC--ATTAT--ACTGC-A----ATTTT-T-T----GTTGA----T-T-G---GT
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        26293 138 -     67325 GCCATTCCAG--AGTC-AGTTCTACTTTTAAAATTGGAG-AAATAC--TAT-GAAC----AG-CTAAAGG-CCT-CC-ACGCTAAAT-TG------------------ATTAGCCATTC-C--TCCTCT-GAGA-TT--tagt----attcacc--attat--actgc-a----att-t-t-ttt--gttga----t-t-g---gt
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           2530 137 -      6182 GCCATTCCAG--AGTC-AGTTCTACTTTTAAAATTGGAG-AAATAC--TAT-GAAC----AG-CTAAAGG-CCT-CC-ACGCTAAAT-TG------------------ATTAGCCATTC-C--TCCTCT-GAGA-TT--TAGT----ATTTACC--ATTAT--ACTGC-A----AATTT-T-T----GTTGA----T-T-G---GT
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             7351 118 -     21651 GACATTCCAG--AGTC-AGTTCTGCTTTCAAG-TTTTAG-AAAGAC--CA--TCAA----TAGCAAAA-G-T--TCC-ACACTGGAC-TA------------------ATTAGCCATAC-T--TTAGC---AGATT---TAGT----GCCGTTCATAGTAC--ATTGC-T----A-------------------------------
i Psammomys_obesus.NESX01036370.1                        C 0 I 2
s Pteronotus_parnellii.KE909381.1                            12838 136 -     21811 GCCATTCCAA--GGT--GGTGTTAACTTTAGA-TACAGGAA-ATAT--TAT-CGAA----AGC-TAGAGG-TTT-AT-ATGTTACAC-Tg------------------attggccatt--c--tcctct-gaga-tt--tagt----attgaccacattat--ggggc-a----att-t-tct----gttta----t-t-g---gt
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         38373 141 +     42204 GCTATTCCAG--AGT-TCAATCTACTTTTAGA-TATAAG-AAATAT--TAT-CAAA----AG-CCAAAGG-TTT-CT-ATGCTAAAC-TG------------------ATTAGCCATT-cc--tcctct-gaga-tt--tagt----atttactgcattat--attat-g----att-t-tct----gttta----t-a-ggctcc
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22974947  71 +  28871421 GCCATTTCTG--AGTC-AGTTCTGCTTTTAGA-TACAGG-AAATGT--CAT-AGAA----AG-CTGAAGG-TTT-CT-ATGCTACAC-----------------------------------------------------------------------------------------------------------------------
i Pteropus_alecto.KB030862.1                             C 0 I 61
s Pteropus_vampyrus.KN525825.1                             1358036  71 +   4952924 GCCATTTCTG--AGTC-AGTTCTGCTTTTAGA-TACAGG-AAATGT--CAT-AGAA----AG-CTGAAGG-TTT-CT-ATGCTACAC-----------------------------------------------------------------------------------------------------------------------
i Pteropus_vampyrus.KN525825.1                           C 0 I 61
s Puma_concolor.QAVW01001104.1                            20272452 137 -  38429054 -CCATTTCAG--AAT-TCATTCTGCTTTTAGA-CATGAG-AAATAT--GAT-CAAA----AG-CCAAAAG-TTT-CT-ATGCTAAAC-TG------------------ATCAGCTATT-CC--TCCTCT-GAGA-TT--CAGT----ATTGACCATAttat--attac-a----act-t-tct----gatta----t-t-g---at
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             12228 135 -     91421 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACAG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7606354 135 +   7812017 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACAG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             12202 135 -     72585 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACAG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53567865 122 +  90668790 GACATTCCAG--AGTC-CCTTCTGCTTTCAAT-TTTTAG-AAATAC--CA--TCAA----CTACAGAAGG-TT-TCC-ACACTGAAC-TA------------------ATTAGCTCTCC-T--TTAGCT-GAGATG---AAGT----GCTTATCATAGTAC--ATTGC-T----A-------------------------------
i Rattus_norvegicus.chr16                                C 0 I 7
s Rhinopithecus_bieti.k119_217274                             3909 135 -     11128 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACAG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91233264 135 - 195417433 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACAG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7668913 135 +   7961872 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACAG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                85940 140 -     96226 gccatttctg--agtc-agttctGCTTTTAGA-TATAGG-AAATGT--CAT-AGAA----AG-CTGAAGA-TTT-CT-ATGCTACAC-Tg------------------attagccatt--c--tcctct-gaga-tt--tagt----atttaccacattat--gttac-a----att-t-tct----gttta----c-t-ggtagt
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               5129 134 -      8359 GCCATTCCAG--AGTC-ACTTCTGCCTTTAGA-TATGGG-GAATAC--TGC-TAAC----AC-CTCA-GG-TCT--C-ATGCTGAAT-GG------------------ATCAGCCACTC-C--TTCTCT-GAGA-TT--TAGC----ATGAACCACATTCT--ATTGC-A----A---T-TGT----GATTA----T-T-G---GT
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            11437 134 -     13588 GCCATTCCAG--AGTC-ACTTCTGCATTTAGA-TATGGG-GAATAC--TGC-TAAC----AC-CTCA-GG-TCT--C-ATGCTGAAC-GG------------------ATCAGCCACTC-C--TCCTCT-GAGA-TT--TAGC----ATGAACCACATTCT--ATTGC-A----A---T-TGT----GATTA----T-T-G---GT
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              5075 134 -      6207 GCCATTCCAG--AGTC-ACTTCTGCCTTTAGA-TATGGG-GAATAC--TGC-TAAC----AC-CTCA-GG-TCT--C-ATGCTGAAC-GG------------------ATCAGCCACTC-C--TCCTCT-GAGA-TT--TAGC----ATGAACCACATTCT--ATTGC-A----A---T-TGT----GATTA----T-T-G---GT
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               10802 134 +     13640 GCCATTCCAG--AGTC-ACTTCTGCCTTTAGA-TATGGG-GAATAC--TGC-TAAC----AC-CTCA-GG-TCT--C-ATGCTGAAC-GG------------------ATCAGCCACTC-C--TCCTCT-GAGA-TT--TAGC----ATGAACCACATTCT--ATTGC-A----A---T-TGT----GATTA----T-T-G---GT
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               5665 134 +      8564 GCCATTCCAG--AGTC-ACTTCTGCCTTTAGA-TATGGG-GAATAC--TGC-TAAC----AC-CTCA-GG-TCT--C-ATGCTGAAC-GG------------------ATCAGTCACTC-C--TCCTCT-GAGA-TT--TAGC----ATGAACCACATTCT--ATTGC-A----A---T-TGT----GATTA----T-T-G---GT
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209465942 134 + 209938924 GCCATTCCAG--AGTC-ACTTCTGCCTTTAGA-TATGGG-GAATAC--TGC-TAAC----AC-CTCA-GG-TCT--C-ATGCTGAAT-GG------------------ATCAGCCACTC-C--TTCTCT-GAGA-TT--TAGC----ATGAACCACATTCT--ATTGC-A----A---T-TGT----GATTA----T-T-G---GT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 5156 134 -      9399 GCCATTCCAG--AGTC-ACTTCTGCCTTTAGA-TATGGG-GAATAC--TGC-TAAC----AC-CTCA-GG-TCT--C-ATGCTGAAC-GG------------------ATCAGCCACTC-C--TCCTCT-GAGA-TT--TAGC----ATGAACCACATTCT--ATTGC-A----A---T-TGT----GATTA----T-T-G---GT
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 2302 134 +      3421 GCCATTCCAG--AGTC-ACTTCTGCATTTAGA-TATGGG-GAATAC--TGC-TAAC----AC-CTCA-GG-TCT--C-ATGCTGAAC-GG------------------ATCAGCCACTC-C--TCCTCT-GAGA-TT--TAGC----ATGAACCACATTCT--ATTGC-A----A---T-TGT----GATTA----T-T-G---GT
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119948480 134 - 121099817 GCCATTCCAG--AGTC-ACTTCTGCCTTTAGA-TATGGG-GCGTAC--TGC-TAAC----AC-CTCA-GG-CCT--C-ATGCTGAAC-TG------------------ACCGGCCATTC-C--CCCTCT-GAGA-TT--CAGC----ATGAACCGCATTCC--ATTGC-A----A---T-TGT----GATTA----T-G-G---GT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       20947 134 +     46362 GCCATTCCAG--AGTC-ACTTCTGCCTTTAGA-TATGGG-GCGTAC--TGC-TAAC----AC-CTCA-GG-CCT--C-ATGCTGAAC-TG------------------ACCGGCCATTC-C--CCCTCT-GAGA-TT--CAGC----ATGAACCGCATTCC--ATTGC-A----A---T-TGT----GATTA----T-G-G---GT
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               21042 134 +     45824 GCCATTCCAG--AGTC-ACTTCTGCCTTTAGA-TATGGG-GCCTAC--TGC-TAAC----AC-CTCA-GG-CCT--C-ATGCTGAAC-TG------------------ACCGGCCATTC-C--CCCTCT-GAGA-TT--CAGC----ATGAACCGCATTCC--ATTGC-A----A---T-TGT----GATTA----T-G-G---GT
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             37657 134 -     64574 GCCATTCCAG--AGTC-ACTTCTGCCTTTAGA-TATGGG-GCGTAC--TGC-TAAC----AC-CTCA-GG-CCT--C-ATGCTGAAC-TG------------------ACCGGCCATTC-C--CCCTCT-GAGA-TT--CAGC----ATGAACCGCATTCC--ATTGC-A----A---T-TGT----GATTA----T-G-G---GT
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                                663 134 -     23631 GCCATTCCAG--AGTC-ACTTCTGCCTTTAGA-TATGGG-GCGTAC--TGC-TAAC----AC-CTCA-GG-CCT--C-ATGCTGAAC-TG------------------ACCGGCCATTC-C--CCCTCT-GAGA-TT--CAGC----ATGAACCGCATTCC--ATTGC-A----A---T-TGT----GATTA----T-G-G---GT
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 20935 134 -     61129 GCCATTCCAG--AGTC-ACTTCTGCCTTTAGA-TATGGG-GCGTAC--TGC-TAAC----AC-CTCA-GG-CCT--C-ATGCTGAAC-TG------------------ACCGGCCATTC-C--CCCTCT-GAGA-TT--CAGC----ATGAACCGCATTCC--ATTGC-A----A---T-TGT----GATTA----T-G-G---GT
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          16736 135 -     19888 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAATGG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      23939 135 +     39453 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            4465 135 +     27826 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAGCCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             3985 135 -     19483 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAGCCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      4047 135 +      7198 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAATGG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         12307 135 +     15514 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11015 122 -     12148 GACATTCCAG--AGTC-AGTTATGCTTTAAGA-TTTTAG-AAATAT--AT--TCAA----CAGCAAAAGG-TT-TTT-AGACTGAAT-TT------------------ATTAGCAAACC-T--TTAGCT-GAGAGT---TAGA----ACTTATCAGAATAC--ATTGC-T----A-------------------------------
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 I 6
s Solenodon_paradoxus.SolPar_flattened_line_126               1975  58 +   1910179 GCCACTCCAG--GGT-CAGTTCTGCTTTTAGA-GATAAC-AAATAG--TAT-CAAA----AG-CTAAAGG-T--------------------------------------------------------------------------------------------------------------------------------------
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 69
s Spermophilus_dauricus.KZ294078.1                         1950518 140 -   3870691 GCCACTCCAG--AGTC-TGTTCTGCATctagt-taaaaa-taatac--tat-cAAT----AG-CTAAGGA-TTAT-C-ACACTAAAT-TT------------------ATCAGCCATCC-C--TCCTCT-GAGA-TT--tagt----atctatcatactat--cttat-a----att-t-t-ttt-cattta----t-t-g---gt
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             28892 137 +     97271 GCCATTCCAG--AGC-TCATTCTACTTTTAGA-TATGAG-AAATAT--TAC-CAAA----AG-CCAAAGG-TTT-CT-ATACTAAAC-Tg------------------atcagccatt-ct--tcctct-gaga-tt--tagt----atttaccacattat--attgc-a----att-t-tct----gctta----t-t-g----c
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              16484 138 -    196729 ACCATTTCAG--ACT-TCATTCTACTTTCAGA-CATGAG-AAATAT--TAT-CAAA----AG-CCAAAAG-TTT-CT-ATGCTAAAC-TG------------------ATTAGCtatt-cc--tcctct-gaga-tt--tagt----attgaccgtattgt--atttc-a----att-t-tct----gacta----a-t-g---at
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.JH118708.1                                      33685 135 -     47482 gccatTCCAG--GGT-TGGTTCAGCTTTTTGA-TATGAG--AATAT--TAT-CAAG----AG-TAA-AAG-TTT-CT-ATGCTAAAC-TG------------------ATCAGCCATT--C--TCCTCT-GAGA-TT--TAAT----ATTTACCAGAttat--attgc-a----att-t-tct----gttta----t-t-g---ct
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1090516 135 -   1523678 GCCATTCCAG--AGTC-AGTTCTGCTTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAAAGG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-C--TCCTCT-GAGA-TT--TAGC----ATGAACCACATTAT--ATTGC-A----A---T-TGT----ATTTA----T-T-G---GT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 8793 122 +     41958 ------------------GTGCTGCTTTTAGA-CACAGG-AAATAT--TAT-CAAA----AG-CTGAAAG-TTT-CT-ATGCTACAA-Tg------------------attagccatt--c--tcctct-gaga-tt--tggt----attaaccacattat--gtcac-a----att-t-tct----gttta----t-t-g---gt
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 5 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 70282 136 +    116680 GCCACACTGA--GGT-CAGTTCTGCTTTTTGA-TATGAG-AAATAT--TAC-CAGA----AG-CTAAACA-TCT-CA-ACTCTAAAC-TG------------------AC-AGTCACGC-C--ACCTCA-GAGA-T---TTAG----ATTTACCACcttat--atagg-a----att-g-tct----gttta----t-t-t---ga
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      116904 133 -    156842 GCCATTCTAG--TCT-TGGTTTCCTTTTTTA-----GAG-AAATAT--TAT-CAAA----AG--TAAAAG-TTT-CT-ATGCTAAAC-TG------------------ATTAGCTATT-Tc--tcctct-gaca-tt--tagt----gtataccatattat--actga-a----att-t-tct----gttta----t-t-g---gt
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    385357 133 +    539355 GCCATTCTAG--TCT-TGGTTTCCTTTTTTA-----GAG-AAATAT--TAT-CAAA----GG--TAAAGG-TTT-CT-ATGCTAAAC-TG------------------ATTAGCCATT-cc--tcctct-gaca-tt--tagt----gtataccatattat--actga-a----att-t-tct----gttta----t-t-g---gt
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               23840 138 +     70052 GTTGTTCCAG--AGTC-AGTTCGGCTTTCAGA-TATGAG-AAATAC--TAT-AAAC----AG-CTAAACA-TTT-GC-ACGCTAAAT-TG------------------ATTGGCCTTTC-C--TTCTCT-GAGA-TG--TAGT----ATTAGCCACAttgt--gttgc-a----at-gt-ttt----gttta----t-t-g---gc
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_2029956                               3185 138 +      4644 GTTGTTCCAG--AGTC-AGTTCGGCTTTCAGA-TATGAG-AAATAC--TAT-AAAC----AG-CTAAACA-TTT-GC-ACGCTAAAT-TG------------------ATTGGCCTTTC-C--TTCTCT-GAGA-TG--TAGT----ATTAGCCACAttgt--gttgc-a----att-t-ttt----gttta----t-t-g---gc
i Tarsius_wallacei.k141_2029956                          C 0 C 0
s Theropithecus_gelada.CM009954.1                        186425634 134 + 186847797 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-ATGCCGAAC-CG------------------A-TAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   2847 136 +      8208 TCCATGTCAA--AAC-CAGTTCTGCTTTTTGA-TATAAG-AAATAT--TAC-CAAA----AG-CCAAGTG-CCT-CA-ACTCTAAAC-TG------------------AG-AGTGATTC-C--TCCTCA-GAGA-T---TTCG----ATTTACCACGttct--gttgg-a----att-g-tct----gttta----t-t-t---ga
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Trachypithecus_auratus.k141_722599                          8038 135 -     20410 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    12232 135 +     15221 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        8139 135 +     19930 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       4568 135 -     19997 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            44688 135 -     60166 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        12160 135 -     27529 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-T--CCCTCT-GGGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     12102 135 -     18194 GCCATTCCAG--AGTC-AGTTTTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           5835 135 -     21137 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    4538 135 -     10723 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTTT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         3690 135 +      9834 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        22006 135 +     32220 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5936105 135 +   6242583 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        5353 135 +     20839 GCCATTCCAG--AGTC-AGTTCTGCCTTTAGA-TATGAG-AAATAC--TAC-TAAC----AC-CTAACGG-CCT--C-ATGCTGAAC-TG------------------AGTAGCCATTC-T--CCCTCT-GAGA-CT--TAGC----ATGAACCACATTAT--ACTGC-A----A---T-TGT----GTGTA----T-T-G---GT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2152589 138 +   4065304 GCTAGTCCGG--AGTC-ACTTCTGCCCCTAGA-TATGAG-AAATAC--TAT-CAAC----AG-CTAAATG-TCT-CC-ATGCTAAAC-TA------------------GTAAGTCACTC-C--TCCTCA-GAGA-TG--TAGT----ATTTACCATATTAT--ATGAC-A----A-AGT-TTT----GTTCA----T-T-G---GT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     6204 138 -     10553 GCTAGTCCGG--AGTC-ACTTCTGCACCTAGA-TATGAG-AAATAC--TAT-CAAC----AG-CTAAATG-TCT-CC-ATGCTAAAC-TA------------------ATAAGTCACTC-C--TCCTCA-GAGT-TG--TAGT----ATTTACCATATTAT--ATTAC-A----A-AGT-TTT----GTTCA----C-T-T---GT
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4848608 128 -   5085361 GCCATTC--G--ATT-TCATTCTACTTTTAGA-TATGAG-AAATAT--TAT-CAAA----AG-CCAAAGG-TTT-CT-ATGCTAAAC-TG------------------ATTAGCCATT--C--TCCTCT-GAGA-TT--TAGT----ATTTACCAcattat--tttgc-a----att-t-ttt----ttt----------------
i Ursus_maritimus.KK499267.1                             C 0 I 7
s Varecia_rubra.k141_590885                                   9162 134 +     50397 GCTATTCCAG--AATC-AGCTCTACTTTTAGA-TAGGAG-AAATAC--TAT-GAAC----AG-CTAAAGG-CCT-CC-ACACTAAAT-TG------------------ATT-GTCATTC-C--TCCTCT-GAGA-TT--TAGT----ATTTACC--ATTAT--ATTGC-A----A-TTt-t-t----gttta----t-t-g---gt
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              9216 134 +     24756 GCTATTCCAG--AATC-AGCTCTACTTTTAGA-TAGGAG-AAATAC--TAT-GAAC----AG-CTAAAGG-CCT-CC-ACACTAAAT-TG------------------ATT-GTCATTC-C--TCCTCT-GAGA-TT--TAGT----ATTTACC--ATTAT--ATTGC-A----A-TTt-t-t----gttta----t-t-g---gt
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5370059 137 -   5488506 GCCATTCCAG--AGC-TGGTTCTGCTTTTTGT-TATGAG-AAATAC--TAT-CAAG----AG-CTAACGg-ttt-cc-atgctaaac-tg------------------attatccatt--c--tccttt-gaga-tt--tagt----atttaccagattat--actgc-a----att-t-tct----attta----t-t-g---gc
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  9072 138 -     43706 GCTGTGCCAG--AGT-TCATTCTACTTTTAGA-TATGAG-AAATAT--TAT-CAAA----AG-CCAAAGG-TTT-CT-ATGCTAAAC-TG------------------ATTAGCCGTT-CC--TCCTCT-GAGA-TT--TAGT----ATTTGCCACAttat--attac-a----att-t-tct----gttta----t-t-t---at
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        21892 139 -     24430 GCCACTCCAG--AATC-TGTTCGGCATCTAGT-TAAGAA-TAACAC--TAT-CAAT----AG-CTACAGA-TTAT-C-ACACTAAAC-TT------------------ATTAGCCATTC-C--TCCTCT-GAGA-TT--TAGT----ATCTATCATATTAT--CTTCT-A----A-TTT---T-TTCATTTA----T-T-G---GT
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          3307 138 +     86975 GCCATTCCAG--AGT-TCATTCTACTCTTAGA-TATGAG-AAATAT--TAT-CAAA----AG-CCAAAGG-TTT-CT-ATGCTAAAC-TG------------------ATTAGCCATT-CC--TCCTCT-GAGA-TT--tagt----atttaccacactat--attgc-a----att-t-tct----gttta----t-c-c---cc
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 4
e Sapajus_macrocephalus.k141_351809                          54316   0 -     80660 C
e Sapajus_apella.ctg103                                    5419275   0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519   0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188   0 +      1777 C
e Cebus_albifrons.Contig27                                25650611   0 +  26074798 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276   0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383   9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584   0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641   0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553   7 +    610378 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937   0 +    114563 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183  10 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482  20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968   0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090   0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823   1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384   0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813   0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690  60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385   0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468   0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491   0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345   0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229   0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831   4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422   0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805   0 +       996 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016   1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456   1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390   1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692   1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520   1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379  13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466   0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363   0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686   0 +   8254450 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009   7 -     19307 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961   0 +     10310 C
e Lipotes_vexillifer.KE559953.1                             268344   0 -    662738 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872  41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650   0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293   0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626   0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547   0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577   3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051   0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516   0 +     36099 C
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312   0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689   0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752   0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447   1 -  14770903 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347   0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175   0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084   0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495   7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076   0 +  35494412 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923   0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569   0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Crocidura_indochinensis.CroInd_scaffold_287352              1624   0 +      4208 I
e Condylura_cristata.JH655891.1                           17547132   5 -  53390261 I
e Chinchilla_lanigera.JH722012.1                           1251498   0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291   0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417   0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157   0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465   7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030   0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310   0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682   0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014   0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932   0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376   0 +  48749331 C
e Bison_bison.KN261452.1                                    200171   0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115   0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905   0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440   0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102   7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675   0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691   7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192   0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       3952 12 +     62944 CCAC---------------------C--T-C-CCT--C-A
s Acinonyx_jubatus.LLWD01001279.1                           825590 11 -   1699592 ccac---------------------c--t-c-c-c--t-c
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 7
s Acomys_cahirinus.AcoCah_scaffold_12655                     68209 12 +     87051 CCAT---------------------C--C-C-ACC--T-A
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 6 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9508849  9 -  29979442 --cc---------------------c--c-c-g-c--c-c
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 7
s Ailurus_fulgens.LNAC01001112.1                             77639  5 -    347723 ccac---------------------c--------------
i Ailurus_fulgens.LNAC01001112.1                         I 20 I 10
s Allactaga_bullata.AllBul_scaffold_9566                     71848 11 -     89534 CCAT---------------------C--A-C-CTC--T--
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   11871 12 -     52922 CCAT---------------------C--T-C-CCT--C-A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         11805 12 -     28001 CCAT---------------------C--T-C-CCT--C-A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          2251 12 -     18505 CCAT---------------------C--T-C-CCT--C-A
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           3100 12 -     12518 CCAT---------------------C--T-C-CCT--C-A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                               704 12 -     27731 CTAT---------------------C--T-C-TCC--C-A
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                 827 12 +      3134 CTAT---------------------C--T-C-TCC--C-A
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                                965 12 -     45847 CTAT---------------------C--T-C-TCC--C-A
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                22169 12 +     25266 CTAT---------------------C--T-C-TCC--C-A
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           1353 12 +      2906 CTAT---------------------C--T-C-TCC--C-A
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            15466 12 -     18578 CTAT---------------------C--T-C-TCC--C-A
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                               853 12 +     47717 CTAT---------------------C--T-C-TCC--C-A
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                              984 12 -      3544 CTAT---------------------C--T-C-TCC--C-A
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             12203 12 +     50774 CTAT---------------------C--T-C-TCC--C-A
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  12826 12 -     33861 CCAG---------------------C--T-C-CCT--A-C
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            12847 12 -     34016 CCAT---------------------C--T-C-TCC--C-A
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4295243 12 -   5030052 CCAT---------------------C--T-C-TCT--G-C
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             12848 12 -     34685 CCAT---------------------C--T-C-CCT--A-C
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               25969 12 -     47192 CCAT---------------------C--T-C-CCT--A-C
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       9508 12 +     20879 AAAT---------------------G--T-T-CTC--C-A
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 1 C 0
s Arctocebus_calabarensis.k141_2318572                        9224  9 +     14667 CCTT---------------------C--T-C-CA------
i Arctocebus_calabarensis.k141_2318572                   I 615 C 0
s Avahi_laniger.k141_765380                                  51550 12 -     92717 ccat---------------------c--t-a-ccc--c-a
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              52179 12 +     85213 ccat---------------------c--t-a-ccc--c-a
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             2591 12 -     10423 CCAT---------------------C--T-C-TCC--C-A
i Callibella_humilis.k141_1278103                        I 51 C 0
s Callimico_goeldii.k141_1091182                             22090 12 +     31915 CCAT---------------------C--T-C-TCC--C-A
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            2561 12 +      5267 CCAT---------------------C--T-C-TCC--C-A
i Callithrix_geoffroyi.k119_512088                       I 51 C 0
s Callithrix_jacchus.pat_scaffold_3                       23587775 12 - 189096842 CCAT---------------------C--T-C-TCC--C-A
i Callithrix_jacchus.pat_scaffold_3                      I 51 C 0
s Callithrix_kuhlii.k119_1164682                              9305 12 -     12001 CCAT---------------------C--T-C-TCC--C-A
i Callithrix_kuhlii.k119_1164682                         I 51 C 0
s Camelus_bactrianus.KN276810.1                           10000696 12 -  17673402 tcat---------------------g--t-c-c-c--cca
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2333160 12 -   7040546 tcat---------------------g--t-c-c-c--cca
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  401436 12 -   1652518 tcat---------------------g--t-c-c-c--cca
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17797594 11 -  60362399 ccac---------------------c--a-c-a-c--c-c
i CanFam4.chr16                                          C 0 I 7
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    183651 11 -    185531 ccac---------------------c--a-c-a-c--c-c
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 I 7
s Canis_lupus_dingo.QKWQ01000480.1                         9033037 11 -   9314153 ccac---------------------c--a-c-a-c--c-c
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 7
s Canis_lupus_familiaris.chr16                            17957302 11 -  59632846 ccac---------------------c--a-c-a-c--c-c
i Canis_lupus_familiaris.chr16                           C 0 I 7
s Canis_lupus_orion.HG994398.1                            18498640 11 +  63665305 ccac---------------------c--a-c-a-c--c-c
i Canis_lupus_orion.HG994398.1                           C 0 I 7
s Carlito_syrichta.NW_007259797.1                           153871 12 -    496798 cCAT---------------------C--T-C-TCA--C-A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    135959 12 +    179628 tcat---------------------c--t-c-ttc--c-a
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     91285 12 +    217609 TTAT---------------------G--TTC-C-C--C-A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          7215 12 -     11392 CCAT---------------------C--T-C-TCC--C-G
i Cebuella_niveiventris.k141_1251222                     I 51 C 0
s Cebuella_pygmaea.k141_1309012                               3313 12 -      7577 CCAT---------------------C--T-C-TCC--C-G
i Cebuella_pygmaea.k141_1309012                          I 51 C 0
s Cephalopachus_bancanus.k141_1423433                         3367 12 +     31688 ccat---------------------c--t-c-tcc--c-a
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12229713 11 +  27778364 ccat---------------------g--t-c-c-c--c-t
i Ceratotherium_simum.JH767749.1                         C 0 I 3
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634            740 11 -     25243 CCAT---------------------G--T-C-C-C--C-T
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 I 3
s Cercocebus_atys.KQ010504.1                               4472830 12 +   4669795 CCAT---------------------C--T-C-CCT--C-A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        11377 12 -     19203 CCAT---------------------C--T-C-CCT--C-A
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           5799 12 +      8260 CCAT---------------------C--T-C-CCT--C-A
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           6026 12 +     27781 CCAT---------------------C--T-C-CCT--C-A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         6182 12 -     20310 CCAT---------------------C--T-C-CCT--C-A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           9161 12 +     29689 CCAT---------------------C--T-C-CCT--C-A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            3591 12 +      9989 CCAT---------------------C--T-C-CCT--C-A
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          11840 12 -     27936 CCAT---------------------C--T-C-CCT--C-A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                             715 12 -     17152 CCAT---------------------C--T-C-CCT--C-A
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38814245 12 +  39242232 CCAT---------------------C--T-C-CCT--C-A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21219944 12 -  21565898 CCAT---------------------C--T-C-CCT--C-A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       37063 12 -     53127 CCAT---------------------C--T-C-CCT--C-A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        4344 12 +      7159 CCAT---------------------C--T-C-CCT--C-A
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       11866 12 -     27947 CCAT---------------------C--T-C-CCT--C-A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         11839 12 +     17596 CCAT---------------------C--T-C-CCT--C-A
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          1061 12 +     26000 CCAT---------------------C--T-C-CCT--C-A
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            5798 10 -      6351 CCAT---------------------C--T-C-C----C-A
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             18966 12 -     52598 ccat---------------------c--t-c-ccc--c-a
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           14311 12 +     57038 ccat---------------------c--t-c-ccc--c-a
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           8238 12 +     11226 CCAT---------------------C--T-C-TCC--C-A
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18425802 12 -  18827391 CCAT---------------------C--T-C-CCT--C-A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       12240 12 -     50209 CCAT---------------------C--T-C-CCT--C-A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135419248 12 + 135778131 CCAT---------------------C--T-C-CCT--C-A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 16143 12 +     19366 cctt---------------------c--t-c-tcc--c-g
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            171242 12 +    839153 cctt---------------------c--t-c-tcc--c-t
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1907764 12 +   2368649 CCAT---------------------C--T-C-CCT--C-A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199947436 12 + 200372422 CCAT---------------------C--T-C-CCT--C-A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              34307 12 +     84244 CCAT---------------------C--T-C-CCT--C-A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          12293 12 -     20389 ccat---------------------g--t-t-c-cc-c-a
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 47909 12 +     63868 CCAT---------------------C--C-C-ATC--C-A
i Cricetomys_gambianus.CriGam_scaffold_18520             I 6 C 0
s Cricetulus_griseus.LT883664.1                           11665249 12 + 224834208 CCAC---------------------C--C-G-ATC--C-A
i Cricetulus_griseus.LT883664.1                          I 6 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             26771  6 -     87169 ccac---------------------c--t-----------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 8
s Ctenodactylus_gundi.CteGun_scaffold_65                    835024 12 +   1526836 tcat---------------------c--t-c-ccc--c-a
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            62123 12 +   2246927 ccat---------------------g--t-c-ccc--c-a
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12535169 12 -  12879189 ccat---------------------c--t-c-ccc--c-a
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  671565 11 +   1390856 ccac---------------------g--t-c-c-c--c-t
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 3
s Diceros_bicornis.DicBicMic_scaffold_5955                    4321 11 +    198055 ccat---------------------g--t-c-c-c--c-t
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 3
s Eidolon_helvum.KE759718.1                                   8812 13 +     11740 ctgt---------------------g--t-c-c-ccac-a
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1089364  2 +  10337057 -------------------------------------C-T
i Elephantulus_edwardii.JH947257.1                       I 5 C 0
s Ellobius_lutescens.LOEQ01008920.1                          17438 12 -    110024 CAGT---------------------C--C-T-GAC--C-A
i Ellobius_lutescens.LOEQ01008920.1                      I 6 C 0
s Ellobius_talpinus.LOJH01109367.1                            3492 11 -      6299 CAA----------------------C--C-T-GAC--C-A
i Ellobius_talpinus.LOJH01109367.1                       I 6 C 0
s Enhydra_lutris.KZ291758.1                               16327604 13 -  41312741 ccac---------------------ccct-a-c-c--c-c
i Enhydra_lutris.KZ291758.1                              C 0 I 7
s Equus_asinus.JREZ01000139.1                              1281620 11 +   4378816 ccat---------------------g--t-c-c-c--a-t
i Equus_asinus.JREZ01000139.1                            C 0 I 3
s Equus_caballus.CM000403.2                               18529441 11 -  39960074 acat---------------------g--t-c-c-c--g-c
i Equus_caballus.CM000403.2                              C 0 I 3
s Equus_przewalskii.KK951119.1                               31456 11 +    498745 acat---------------------g--t-c-c-c--g-c
i Equus_przewalskii.KK951119.1                           C 0 I 3
s Erythrocebus_patas.Contig38                             21202438 12 -  21539334 CCAT---------------------C--T-C-CCT--C-A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              11658 12 -     14127 CCAT---------------------C--T-C-CCC--C-A
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                4356 12 -     16928 CCAT---------------------C--T-C-CCC--C-A
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              13393 12 -     25546 CCAT---------------------C--T-C-CCC--C-A
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            10583 12 +     26330 CCAT---------------------C--T-C-CCC--C-A
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 11822 12 +     23973 CCAT---------------------C--T-C-CCC--C-A
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                10583 12 +     75513 ccat---------------------c--t-c-ccc--c-a
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  8525 12 +     97555 ccat---------------------c--t-c-ccc--c-a
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            11461 12 +     26496 CCAT---------------------C--T-C-CCC--C-A
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  2058 12 -     17153 ccgt---------------------c--t-c-ccc--c-a
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              11634 12 +    111500 ccat---------------------c--t-c-ccc--c-a
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20235461 11 + 206538554 ccac---------------------c--t-c-c-c--t-c
i Felis_catus.CM001381.2                                 C 0 I 7
s Felis_catus_fca126.CM031415.1                           20194304 11 + 205367284 CCAC---------------------C--T-C-C-C--T-C
i Felis_catus_fca126.CM031415.1                          C 0 I 7
s Felis_nigripes.FelNig_flattened_line_20823                  7818 11 -     36744 CCAC---------------------C--T-C-C-C--T-C
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 7
s Galago_moholi.ctg2040                                     424196  9 -    453645 cctt---------------------c--t-c-ca------
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             1903  9 +     11339 CCTT---------------------C--T-C-CA------
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1959596                            5710  9 +      6795 CCTT---------------------C--T-C-CA------
i Galagoides_demidoff.k141_1959596                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_197845               1883 33 -      3123 CCATAAACAAtgtttttgtttattgc--a-c-ccc--c-a
i Galeopterus_variegatus.GalVar_scaffold_197845          C 0 C 0
s Gorilla_beringei.k141_3596273                              13205 12 -     32273 CCAC---------------------C--T-C-CCT--C-A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186335353 12 + 186649187 ccac---------------------c--t-c-cct--c-a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   32374 12 +     78134 CCAT---------------------C--T-C-CTC--C-A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           4712 12 -     19426 CCAT---------------------C--T-C-CCC--C-A
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              9861 12 -     15286 CCAT---------------------C--T-C-CCC--C-A
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             11500 12 +     18253 CCAT---------------------C--T-C-CCC--C-A
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         11601 12 -     41752 CCAT---------------------C--T-C-CCC--C-A
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         11439 12 -     16460 CCAT---------------------C--T-C-CCC--C-A
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               240621  6 +    327341 CCAC---------------------C--T-----------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 8
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 594 12 +       961 ccat---------------------c--t-c-cca--c-a
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       110098 12 +   1711038 ccat---------------------g--t-a-c-cc-c-a
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               41521 12 +     43066 CCAT---------------------G--T-A-C-G-CC-A
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    432016 12 +    630532 CCAC---------------------C--T-C-CCT--C-A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  42747  6 +     55795 CCAC---------------------C--T-----------
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 8
s Hylobates_agilis.k141_307679                               14953 12 -     15490 CCAC---------------------C--T-C-CCT--C-A
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              56959 12 +     67168 CCAC---------------------C--T-C-CCT--C-A
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189540609 12 - 191637585 CCAC---------------------C--T-C-CCT--C-A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3333503 12 -  11177569 CCAC---------------------C--T-C-CCT--C-A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7517574 12 -   7955117 tcat---------------------c--t-c-ctg--c-a
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   20406 12 +     31101 ccat---------------------c--t-c-ccc--g-a
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8276482 11 -   9596543 TTAT---------------------C--A-C-ATT--T--
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lemur_catta.scaffold_24                                 15521963 12 -  30322482 ccat---------------------c--t-c-ccc--c-a
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        4955 12 +     64341 CCAT---------------------C--T-C-TCC--C-A
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           2015 12 +      4941 CCAT---------------------C--T-C-TCC--C-A
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4883 12 +     35603 CCAT---------------------C--T-C-TCC--C-A
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    26355 12 +     38576 CCAT---------------------C--T-C-TCC--C-A
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         23052 12 +     66356 CCAT---------------------C--T-C-TCC--C-A
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          8844 12 -     23766 CCAC---------------------C--T-C-CCC--A-A
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             26791 12 +     45836 CCAC---------------------C--T-C-CCC--A-A
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_320948                          1015 12 -      1719 ccac---------------------c--t-c-ccc--c-a
i Lepilemur_ruficaudatus.k141_320948                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      24846 12 +     54090 CCAC---------------------C--T-C-CCC--A-A
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.APMU01168965.1                       391  4 -      1094 --------------------------------c-a--c-c
i Leptonychotes_weddellii.APMU01168965.1                 I 4 I 7
s Lepus_americanus.LepAme_scaffold_107385                     3844 12 -     14121 CCAC---------------------C--T-T-TCC--T-C
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1434375 12 +   1826925 CCAT---------------------C--T-C-CCT--C-A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            3652  9 +     11245 CCTT---------------------C--T-C-CA------
i Loris_lydekkerianus.k141_2539221                       I 17 C 0
s Loris_tardigradus.ctg83                                  1002490  9 +   6120653 CCTT---------------------C--T-C-CA------
i Loris_tardigradus.ctg83                                I 17 C 0
s Loxodonta_africana.GL010049.1                            4214879 12 -  43346337 ccat---------------------c--t-c-cca--c-a
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17953542 11 -  59628241 ccac---------------------c--a-c-a-c--c-c
i Lycaon_pictus.CM007581.1                               C 0 I 7
s Macaca_arctoides.k141_2326796                               4188 12 +     40492 CCAT---------------------C--T-C-CCT--C-A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59673450 12 +  60120075 CCAT---------------------C--T-C-CCT--C-A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  9944 12 -     26193 CCAT---------------------C--T-C-CCT--C-A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            77748 12 -    114318 CCAT---------------------C--T-C-CCT--C-A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  3447 12 -     23192 CCAT---------------------C--T-C-CCT--C-A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                12907 12 -     29190 CCAT---------------------C--T-C-CCT--C-A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  21475 12 +     37952 CCAT---------------------C--T-C-CCT--C-A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186836563 12 + 187317192 CCAT---------------------C--T-C-CCT--C-A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25455126 12 -  25927173 CCAT---------------------C--T-C-CCT--C-A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  77324 12 +     89720 CCAT---------------------C--T-C-CCT--C-A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 4321 12 +     20474 CCAT---------------------C--T-C-CCT--C-A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   4123 12 -     14993 CCAT---------------------C--T-C-CCT--C-A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  326993 12 -    668171 CCAT---------------------C--T-C-CCT--C-A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 2433 12 -     24072 CCAT---------------------C--T-C-CCT--C-A
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               23062 12 -     45290 CCAT---------------------C--T-C-CCT--C-A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88886 13 +     94391 CTAT---------------------G--T-C-C-CCAC-A
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23934649 12 -  24302211 CCAT---------------------C--T-C-CCT--C-A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               348782 12 +    752769 CCAT---------------------C--T-C-CCT--C-A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              17740 11 +    737560 ccat---------------------c--t-c-t-c--c-a
i Manis_javanica.JSZB01003497.1                          C 0 I 7
s Manis_pentadactyla.KN006162.1                              49126 11 -    317179 ccat---------------------c--t-c-t-c--c-a
i Manis_pentadactyla.KN006162.1                          C 0 I 7
s Marmota_marmota.CZRN01000018.1                          33099885 12 -  40650429 tcat---------------------c--t-c-ctc--c-a
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         8635 12 -    207569 tcgt---------------------a--t-c-t-cc-c-a
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              8321 13 +     13704 ccac---------------------cccc-a-c-c--c-c
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 7
s Meriones_unguiculatus.MerUng_scaffold_7390                 29831 12 +    140813 CCAT---------------------C--C-C-ATC--C-A
i Meriones_unguiculatus.MerUng_scaffold_7390             I 2 C 0
s Mesocricetus_auratus.KB708134.1                         12180309 12 -  29670104 CCAT---------------------C--C-C-ATC--C-A
i Mesocricetus_auratus.KB708134.1                        I 6 C 0
s Mico_argentatus.k141_1239457                                3137 12 -      7380 CCAT---------------------C--T-C-TCC--C-A
i Mico_argentatus.k141_1239457                           I 51 C 0
s Mico_humeralifer.k141_1976199                               2203 12 +     18990 CCAT---------------------C--T-C-TCC--C-A
i Mico_humeralifer.k141_1976199                          I 51 C 0
s Mico_schneideri.k141_1950671                                      3142 12 -      7356 CCAT---------------------C--T-C-TCC--C-A
i Mico_schneideri.k141_1950671                                 I 51 C 0
s Microcebus_murinus.CM007674.1                           18289350 12 -  93316391 cCAT---------------------C--T-C-CCC--T-A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    16156 12 -    145209 CCAC---------------------C--T-C-CCT--C-A
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 738
s Microtus_ochrogaster.CM001695.1                         11257948 12 -  27267610 CAAT---------------------C--C-T-GAC--C-A
i Microtus_ochrogaster.CM001695.1                        I 6 C 0
s Miopithecus_ogouensis.k141_534055                           6369 12 -     28506 CCAT---------------------C--T-C-CCT--C-A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         3805  4 -      8324 --------------------------------c-a--c-c
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 4 I 7
s Mirza_zaza.k141_952172                                      6923 12 -     37649 ccat---------------------c--t-c-ccc--c-a
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 139583 10 -    366855 CCAT---------------------G--T-CCT-G-----
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 1
s Mungos_mungo.MunMun_flattened_line_23663                   33728  6 +     37127 CCAC---------------------C--T-----------
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 8
s Mus_caroli.LT608237.1                                   84358922  7 - 120012414 ----------------------------C-C-ATC--C-A
i Mus_caroli.LT608237.1                                  I 6 C 0
s Mus_musculus.chr8                                       87647911  7 - 129401213 ----------------------------C-C-ATC--C-G
i Mus_musculus.chr8                                      I 6 C 0
s Mus_pahari.LT608297.1                                   31352189  7 -  89631738 ----------------------------T-C-ATC--C-A
i Mus_pahari.LT608297.1                                  I 64 C 0
s Mus_spretus.CM004101.1                                  90749989  7 - 130317789 ----------------------------C-C-ATC--C-A
i Mus_spretus.CM004101.1                                 I 6 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              4663 12 +     14296 CCAT---------------------C--T-C-CTC--C-A
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 1492
s Mustela_putorius.JH418006.1                               299502 13 -  14710649 ccac---------------------cccc-a-c-c--c-c
i Mustela_putorius.JH418006.1                            C 0 I 7
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187064 12 +    196477 actt---------------------c--t-t-tcc--c-a
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nasalis_larvatus.k141_413338                               12365 12 +     21681 CCAT---------------------C--T-C-CCT--C-A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    758182  1 +    783361 C---------------------------------------
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9147800 11 -   9404916 ccac---------------------c--a-c-a-c--c-c
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 7
s Nycticebus_bengalensis.LG01                            102577413  9 - 196305487 cctt---------------------c--t-c-ca------
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             5099  9 +      8486 cctt---------------------c--t-c-ca------
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105747840  9 + 199412804 cctt---------------------c--t-c-ca------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1360927 12 +   3988456 ccac---------------------c--t-t-tcc--c-c
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              504893  4 -   2017862 --------------------------------C-C--C-T
i Odobenus_rosmarus.KB229312.1                           I 4 I 69
s Ondatra_zibethicus.OndZib_scaffold_46174                   22064 12 +     28053 CAAT---------------------C--C-T-GAC--C-A
i Ondatra_zibethicus.OndZib_scaffold_46174               I 6 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    77138 12 +    102263 CCAC---------------------C--C-C-ATC--C-A
i Onychomys_torridus.OnyTor_scaffold_2986                I 6 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               7411 12 -     18566 tcat---------------------c--t-c-ccc--c-a
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67144689 12 + 174332312 ccac---------------------c--t-t-tct--t-c
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       460556 11 -    559221 ccac---------------------c--a-c-a-c--c-c
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 7
s Otolemur_crassicaudatus.k141_222918                         1738  9 +      8798 CCTT---------------------C--T-C-CA------
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             693905  9 -   1103335 CCTT---------------------C--T-C-CA------
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    41304 12 +     80009 CCAC---------------------C--T-C-CCT--C-A
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189140214 12 + 189151597 CCAC---------------------C--T-C-CCT--C-A
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  149470 11 +    230217 ccac---------------------c--t-c-c-c--t-c
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 7
s Panthera_pardus.KV860321.1                                262675 11 +  18783137 ccac---------------------c--t-c-c-c--t-c
i Panthera_pardus.KV860321.1                             C 0 I 7
s Panthera_tigris.KE722367.1                               4719312 11 -   8748460 ccac---------------------c--t-c-c-c--t-c
i Panthera_tigris.KE722367.1                             C 0 I 7
s Papio_anubis.CM001495.2                                183440403 12 + 183742232 CCAT---------------------C--T-C-CCT--C-A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             4096 12 +     20448 CCAT---------------------C--T-C-CCT--C-A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20560902 12 +  20919399 CCAT---------------------C--T-C-CCT--C-A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   2840 12 +     41871 CCAT---------------------C--T-C-CCT--C-A
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     6126 12 +     27711 CCAT---------------------C--T-C-CCT--C-A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  6205 12 +      9205 CCAT---------------------C--T-C-CTT--C-A
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10937  6 -     78924 ccac---------------------c--c-----------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 8
s Perodicticus_ibeanus.k141_855320                            7865  9 +     13100 CCTT---------------------C--T-C-CA------
i Perodicticus_ibeanus.k141_855320                       I 39 C 0
s Perodicticus_potto.k141_1092580                             6243  9 +     25941 cctt---------------------c--t-c-ca------
i Perodicticus_potto.k141_1092580                        I 39 C 0
s Peromyscus_maniculatus.KI615324.1                       18191737 12 -  18517816 CCAC---------------------C--C-C-ATG--C-A
i Peromyscus_maniculatus.KI615324.1                      I 6 C 0
s Piliocolobus_badius.k141_1234363                           40873 12 +     62158 CCAT---------------------C--T-C-CCT--C-A
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        35602 12 +     89929 CCAT---------------------C--T-C-CCT--C-A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            37018 12 +     51399 CCAT---------------------C--T-C-CCT--C-A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14293256 12 -  14605196 CCAT---------------------C--T-C-CCT--C-A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189128329 12 + 189387572 CCAC---------------------C--T-C-CCT--C-A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9567937 12 +   9816681 CCAC---------------------C--T-C-CCT--C-A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               70528 12 -     81375 CCAT---------------------C--T-C-CCT--C-A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              2348 12 +     19060 CCAT---------------------C--T-C-CCT--C-A
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 10343 12 -     22811 ccat---------------------c--t-c-cca--c-a
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2594613 12 -   4620579 ccAT---------------------C--T-C-CCC--C-A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     988604 12 +   2598838 CCAT---------------------C--T-A-CCC--C-A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          26914 12 +     38485 CCAT---------------------C--T-A-CCC--C-A
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             3074 12 +      4256 ccat---------------------c--t-a-ccc--c-a
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          24434 12 +     35766 CCAT---------------------C--T-A-CCC--C-A
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           2617 12 -     24134 CCAT---------------------C--T-A-CCC--C-A
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        26431 12 -     67325 ccat---------------------c--t-a-ccc--c-a
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           2667 12 -      6182 CCAT---------------------C--T-A-CCC--C-A
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             7471 12 -     21651 CCAT---------------------C--c-c-atc--c-a
i Psammomys_obesus.NESX01036370.1                        I 2 C 0
s Pteronotus_parnellii.KE909381.1                            12974 10 -     21811 ccat---------------------a--t-ccc-c-----
i Pteronotus_parnellii.KE909381.1                        C 0 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_31117         38514 13 +     42204 ccac---------------------cccc-a-c-c--c-c
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 7
s Pteropus_alecto.KB030862.1                              22975079 13 +  28871421 ctat---------------------g--t-c-c-ccac-a
i Pteropus_alecto.KB030862.1                             I 61 C 0
s Pteropus_vampyrus.KN525825.1                             1358168 13 +   4952924 ctat---------------------g--t-c-c-ccac-a
i Pteropus_vampyrus.KN525825.1                           I 61 C 0
s Puma_concolor.QAVW01001104.1                            20272589 11 -  38429054 ccac---------------------c--t-c-c-c--t-c
i Puma_concolor.QAVW01001104.1                           C 0 I 7
s Pygathrix_cinerea.k141_1153803                             12363 12 -     91421 CCAT---------------------C--T-C-CCT--C-A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7606489 12 +   7812017 CCAT---------------------C--T-C-CCT--C-A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             12337 12 -     72585 CCAT---------------------C--T-C-CCT--C-A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53567994  7 +  90668790 ----------------------------C-C-ATC--C-T
i Rattus_norvegicus.chr16                                I 7 C 0
s Rhinopithecus_bieti.k119_217274                             4044 12 -     11128 CCAT---------------------C--T-C-CCT--C-A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91233399 12 - 195417433 CCAT---------------------C--T-C-CCT--C-A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7669048 12 +   7961872 CCAT---------------------C--T-C-CCT--C-A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                86080 13 -     96226 ctat---------------------g--t-c-c-ccac-a
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               5263 12 -      8359 CCAT---------------------C--T-C-TCC--C-A
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            11571 12 -     13588 CCAT---------------------C--T-C-TCC--C-A
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              5209 12 -      6207 CCAC---------------------C--T-C-TCC--C-A
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               10936 12 +     13640 CCAC---------------------C--T-C-TCC--C-A
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               5799 12 +      8564 CCAC---------------------C--T-C-TCC--C-A
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209466076 12 + 209938924 CCAT---------------------C--T-C-TCC--C-A
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 5290 12 -      9399 CCAC---------------------C--T-C-TCC--C-A
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 2436 12 +      3421 CCAT---------------------C--T-C-TCC--C-A
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119948614 12 - 121099817 CCAC---------------------C--T-C-TCC--C-A
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       21081 12 +     46362 CCAC---------------------C--T-C-TCC--C-A
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               21176 12 +     45824 CCAC---------------------C--T-C-TCC--C-A
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             37791 12 -     64574 CCAC---------------------C--T-C-TCC--C-A
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                                797 12 -     23631 CCAC---------------------C--T-C-TCC--C-A
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 21069 12 -     61129 CCAC---------------------C--T-C-TCC--C-A
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          16871 12 -     19888 CCAT---------------------C--T-C-CCT--C-A
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      24074 12 +     39453 CCAT---------------------C--T-C-CCT--C-A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            4600 12 +     27826 CCAT---------------------C--T-C-CCT--C-A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             4120 12 -     19483 CCAT---------------------C--T-C-CCT--C-A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      4182 12 +      7198 CCAT---------------------C--T-C-CCT--C-A
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         12442 12 +     15514 CCAT---------------------C--T-C-CCT--C-A
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11143 12 -     12148 TCAT---------------------C--C-C-ATC--C-A
i Sigmodon_hispidus.SigHis_scaffold_60841                I 6 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               2102 11 +   1910179 tcat---------------------c--t-a-c-c--c-a
i Solenodon_paradoxus.SolPar_flattened_line_126          I 69 C 0
s Spermophilus_dauricus.KZ294078.1                         1950658 12 -   3870691 tcat---------------------c--t-c-ctg--c-a
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             29029 13 +     97271 ccac---------------------cccc-a-c-t--g-c
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 7
s Suricata_suricatta.SurSur_flattened_line_6629              16622  6 -    196729 ccac---------------------c--t-----------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 8
s Sus_scrofa.JH118708.1                                      33820 11 -     47482 ttat---------------------g--t-c-t-c--c-a
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1090651 12 -   1523678 CCAC---------------------C--T-C-CCT--C-A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 8915 12 +     41958 ccat---------------------g--t-c-t-cc-c-a
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 70418 12 +    116680 actt---------------------c--t-t-tcc--c-a
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      117037 11 -    156842 ccat---------------------g--t-c-c-c--c-c
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 3
s Tapirus_terrestris.TapTer_scaffold_755                    385490 11 +    539355 ccat---------------------g--t-c-c-c--c-c
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 3
s Tarsius_lariang.k141_2201908                               23978 12 +     70052 ccat---------------------c--t-c-tcc--c-a
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_2029956                               3323 12 +      4644 ccat---------------------c--t-c-tcc--c-a
i Tarsius_wallacei.k141_2029956                          C 0 C 0
s Theropithecus_gelada.CM009954.1                        186425768 12 + 186847797 CCAT---------------------C--T-C-CCT--C-A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   2983 12 +      8208 ccat---------------------c--t-c-cct--c-a
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Trachypithecus_auratus.k141_722599                          8173 12 -     20410 CCAT---------------------C--T-C-CCT--C-A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    12367 12 +     15221 CCAT---------------------C--T-C-CCT--C-A
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        8274 12 +     19930 CCAT---------------------C--T-C-CCT--C-A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       4703 12 -     19997 CCAT---------------------C--T-C-CCT--C-A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            44823 12 -     60166 CCAT---------------------C--T-C-CCT--T-A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        12295 12 -     27529 CCAT---------------------C--T-C-CCT--C-A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     12237 12 -     18194 CCAT---------------------C--T-C-CCT--C-A
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           5970 12 -     21137 CCAT---------------------C--T-C-CCT--C-A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    4673 12 -     10723 CCAT---------------------C--T-C-CCT--C-A
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         3825 12 +      9834 CCAT---------------------C--T-C-CCT--C-A
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        22141 12 +     32220 CCAT---------------------C--T-C-CCT--C-A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5936240 12 +   6242583 CCAT---------------------C--T-C-CCT--C-A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        5488 12 +     20839 CCAT---------------------C--T-C-CCT--C-A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2152727 12 +   4065304 TCCT---------------------C--T-C-CCT--G-A
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     6342 12 -     10553 TCCT---------------------C--T-C-CCT--G-A
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Varecia_rubra.k141_590885                                   9296 12 +     50397 ccat---------------------c--t-c-ccc--c-a
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              9350 12 +     24756 ccat---------------------c--t-c-ccc--c-a
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5370196 12 -   5488506 tcat---------------------g--t-c-c-c--cca
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  9210 11 -     43706 ccac---------------------c--a-c-a-c--c-c
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 7
s Xerus_inauris.XerIna_scaffold_48378                        22031 12 -     24430 ACAT---------------------C--T-C-TTC--C-A
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          3449  4 +     86975 --------------------------------c-c--c-c
i Zalophus_californianus.ZalCal_flattened_line_17732     I 4 I 7
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519  0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188  0 +      1777 C
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9947 50 -     10935 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Ursus_maritimus.KK499267.1                               4848736  7 -   5085361 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383  9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Crocidura_indochinensis.CroInd_scaffold_287352              1624  0 +      4208 I
e Condylura_cristata.JH655891.1                           17547132  5 -  53390261 I
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       3964 3 +     62944 CAG
s Acinonyx_jubatus.LLWD01001279.1                           825608 3 -   1699592 gga
i Acinonyx_jubatus.LLWD01001279.1                        I 7 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     68221 3 +     87051 CAA
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9508865 3 -  29979442 gga
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 7 C 0
s Ailurus_fulgens.LNAC01001112.1                             77654 3 -    347723 gga
i Ailurus_fulgens.LNAC01001112.1                         I 10 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     71859 1 -     89534 --G
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   11883 3 -     52922 CAG
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         11817 3 -     28001 CAG
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          2263 3 -     18505 CAG
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           3112 3 -     12518 CAG
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                               716 3 -     27731 CAG
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                 839 3 +      3134 CAG
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                                977 3 -     45847 CAG
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                22181 3 +     25266 CAG
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           1365 3 +      2906 CAG
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            15478 3 -     18578 CAG
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                               865 3 +     47717 CAG
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                              996 3 -      3544 CAG
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             12215 3 +     50774 CAG
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  12838 3 -     33861 CAG
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            12859 3 -     34016 CAG
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4295255 3 -   5030052 CAG
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             12860 3 -     34685 CAG
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               25981 3 -     47192 CAG
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       9520 3 +     20879 CAG
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                        9233 2 +     14667 -AT
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Avahi_laniger.k141_765380                                  51562 3 -     92717 cag
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              52191 3 +     85213 cag
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             2603 3 -     10423 CAG
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             22102 3 +     31915 CAG
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            2573 3 +      5267 CAG
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23587787 3 - 189096842 CAG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              9317 3 -     12001 CAG
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10000708 3 -  17673402 taa
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2333172 3 -   7040546 taa
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  401448 3 -   1652518 taa
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17797612 3 -  60362399 gga
i CanFam4.chr16                                          I 7 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    183669 3 -    185531 gga
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 7 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9033055 3 -   9314153 gga
i Canis_lupus_dingo.QKWQ01000480.1                       I 7 C 0
s Canis_lupus_familiaris.chr16                            17957320 3 -  59632846 gga
i Canis_lupus_familiaris.chr16                           I 7 C 0
s Canis_lupus_orion.HG994398.1                            18498658 3 +  63665305 gga
i Canis_lupus_orion.HG994398.1                           I 7 C 0
s Carlito_syrichta.NW_007259797.1                           153883 3 -    496798 CAA
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    135971 3 +    179628 cag
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     91297 3 +    217609 TAA
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          7227 3 -     11392 CAG
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               3325 3 -      7577 CAG
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         3379 3 +     31688 caa
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12229727 3 +  27778364 gga
i Ceratotherium_simum.JH767749.1                         I 3 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634            754 3 -     25243 GGA
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 3 C 0
s Cercocebus_atys.KQ010504.1                               4472842 3 +   4669795 CAG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        11389 3 -     19203 CAG
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           5811 3 +      8260 CAG
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           6038 3 +     27781 CAG
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         6194 3 -     20310 CAG
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           9173 3 +     29689 CAG
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            3603 3 +      9989 CAG
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          11852 3 -     27936 CAG
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                             727 3 -     17152 CAG
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38814257 3 +  39242232 CAG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21219956 3 -  21565898 CAG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       37075 3 -     53127 CAG
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        4356 3 +      7159 CAG
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       11878 3 -     27947 CAG
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         11851 3 +     17596 CAG
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          1073 3 +     26000 CAG
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            5808 3 -      6351 GAG
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             18978 3 -     52598 cag
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           14323 3 +     57038 cag
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           8250 3 +     11226 CAG
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18425814 3 -  18827391 CAG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       12252 3 -     50209 CAG
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135419260 3 + 135778131 CAG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 16155 3 +     19366 cag
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            171254 3 +    839153 cag
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1907776 3 +   2368649 CAG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199947448 3 + 200372422 CAG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              34319 3 +     84244 CAG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          12305 3 -     20389 cgg
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 47921 3 +     63868 CAA
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11665261 3 + 224834208 CAA
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             26785 3 -     87169 gga
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 8 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    835036 3 +   1526836 cag
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            62135 3 +   2246927 cag
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12535181 3 -  12879189 cag
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  671579 3 +   1390856 gga
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 3 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    4335 3 +    198055 gga
i Diceros_bicornis.DicBicMic_scaffold_5955               I 3 C 0
s Eidolon_helvum.KE759718.1                                   8825 3 +     11740 cag
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1089366 3 +  10337057 TAG
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          17450 3 -    110024 TGA
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01109367.1                            3503 3 -      6299 TGA
i Ellobius_talpinus.LOJH01109367.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16327624 3 -  41312741 gga
i Enhydra_lutris.KZ291758.1                              I 7 C 0
s Equus_asinus.JREZ01000139.1                              1281634 3 +   4378816 ggt
i Equus_asinus.JREZ01000139.1                            I 3 C 0
s Equus_caballus.CM000403.2                               18529455 3 -  39960074 ggt
i Equus_caballus.CM000403.2                              I 3 C 0
s Equus_przewalskii.KK951119.1                               31470 3 +    498745 ggt
i Equus_przewalskii.KK951119.1                           I 3 C 0
s Erythrocebus_patas.Contig38                             21202450 3 -  21539334 CAG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              11670 3 -     14127 CAG
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                4368 3 -     16928 CAG
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              13405 3 -     25546 CAG
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            10595 3 +     26330 CAG
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 11834 3 +     23973 CAG
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                10595 3 +     75513 cag
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  8537 3 +     97555 cag
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            11473 3 +     26496 CAG
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  2070 3 -     17153 cag
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              11646 3 +    111500 cag
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20235479 3 + 206538554 gga
i Felis_catus.CM001381.2                                 I 7 C 0
s Felis_catus_fca126.CM031415.1                           20194322 3 + 205367284 GGA
i Felis_catus_fca126.CM031415.1                          I 7 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  7836 3 -     36744 GGA
i Felis_nigripes.FelNig_flattened_line_20823             I 7 C 0
s Galago_moholi.ctg2040                                     424205 2 -    453645 -at
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             1912 2 +     11339 -AT
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1959596                            5719 2 +      6795 -AT
i Galagoides_demidoff.k141_1959596                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_197845               1916 3 -      3123 tag
i Galeopterus_variegatus.GalVar_scaffold_197845          C 0 C 0
s Gorilla_beringei.k141_3596273                              13217 3 -     32273 CAG
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186335365 3 + 186649187 cag
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   32386 3 +     78134 CAA
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           4724 3 -     19426 CAG
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              9873 3 -     15286 CAG
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             11512 3 +     18253 CAG
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         11613 3 -     41752 CAG
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         11451 3 -     16460 CAG
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               240635 3 +    327341 GGA
i Helogale_parvula.HelPar_flattened_line_2585            I 8 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 606 3 +       961 taa
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       110110 3 +   1711038 cag
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               41533 3 +     43066 TAG
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    432028 3 +    630532 CAG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  42761 3 +     55795 GGA
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 8 C 0
s Hylobates_agilis.k141_307679                               14965 3 -     15490 CAG
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              56971 3 +     67168 CAG
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189540621 3 - 191637585 CAG
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3333515 3 -  11177569 CAG
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7517586 3 -   7955117 cag
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   20418 3 +     31101 cag
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15521975 3 -  30322482 cag
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        4967 3 +     64341 CAG
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           2027 3 +      4941 CAG
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4895 3 +     35603 CAG
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    26367 3 +     38576 CAG
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         23064 3 +     66356 CAG
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          8856 3 -     23766 CAG
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             26803 3 +     45836 CAG
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_320948                          1027 3 -      1719 cag
i Lepilemur_ruficaudatus.k141_320948                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      24858 3 +     54090 CAG
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.APMU01168965.1                       402 3 -      1094 gga
i Leptonychotes_weddellii.APMU01168965.1                 I 7 C 0
s Lepus_americanus.LepAme_scaffold_107385                     3856 3 -     14121 CAG
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1434387 3 +   1826925 CAG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            3661 2 +     11245 -AT
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1002499 2 +   6120653 -AT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214891 3 -  43346337 tag
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17953560 3 -  59628241 gga
i Lycaon_pictus.CM007581.1                               I 7 C 0
s Macaca_arctoides.k141_2326796                               4200 3 +     40492 CAG
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59673462 3 +  60120075 CAG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  9956 3 -     26193 CAG
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            77760 3 -    114318 CAG
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  3459 3 -     23192 CAG
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                12919 3 -     29190 CAG
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  21487 3 +     37952 CAG
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186836575 3 + 187317192 CAG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25455138 3 -  25927173 CAG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  77336 3 +     89720 CAG
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 4333 3 +     20474 CAG
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   4135 3 -     14993 CAG
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  327005 3 -    668171 CAG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 2445 3 -     24072 CAG
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               23074 3 -     45290 CAG
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88899 3 +     94391 GAG
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23934661 3 -  24302211 CAG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               348794 3 +    752769 CAG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              17758 3 +    737560 tga
i Manis_javanica.JSZB01003497.1                          I 7 C 0
s Manis_pentadactyla.KN006162.1                              49144 3 -    317179 tga
i Manis_pentadactyla.KN006162.1                          I 7 C 0
s Marmota_marmota.CZRN01000018.1                          33099897 3 -  40650429 cag
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         8647 3 -    207569 cag
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              8341 3 +     13704 gga
i Mellivora_capensis.MelCap_flattened_line_69365         I 7 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 29843 3 +    140813 TAA
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12180321 3 -  29670104 CAA
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                3149 3 -      7380 CAG
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               2215 3 +     18990 CAG
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      3154 3 -      7356 CAG
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18289362 3 -  93316391 CAG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    16906 3 -    145209 cag
i Microgale_talazaci.MicTal_scaffold_6613                I 738 C 0
s Microtus_ochrogaster.CM001695.1                         11257960 3 -  27267610 CGA
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miopithecus_ogouensis.k141_534055                           6381 3 -     28506 CAG
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         3816 3 -      8324 gga
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 7 C 0
s Mirza_zaza.k141_952172                                      6935 3 -     37649 cag
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 139594 2 -    366855 -AC
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 1 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   33742 3 +     37127 GGA
i Mungos_mungo.MunMun_flattened_line_23663               I 8 C 0
s Mus_caroli.LT608237.1                                   84358929 3 - 120012414 CAA
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87647918 3 - 129401213 CAA
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31352196 3 -  89631738 CAA
i Mus_pahari.LT608297.1                                  C 0 I 390
s Mus_spretus.CM004101.1                                  90749996 3 - 130317789 CAA
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              6167 3 +     14296 CAG
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 1492 T 1492
s Mustela_putorius.JH418006.1                               299522 3 -  14710649 gga
i Mustela_putorius.JH418006.1                            I 7 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187076 3 +    196477 cag
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nasalis_larvatus.k141_413338                               12377 3 +     21681 CAG
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9147818 3 -   9404916 gga
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 7 C 0
s Nycticebus_bengalensis.LG01                            102577422 2 - 196305487 -at
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             5108 2 +      8486 -at
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105747849 2 + 199412804 -at
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1360939 3 +   3988456 tgg
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              504966 3 -   2017862 aga
i Odobenus_rosmarus.KB229312.1                           I 69 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   22076 3 +     28053 CAA
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    77150 3 +    102263 CAA
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               7423 3 -     18566 cag
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67144701 3 + 174332312 cag
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       460574 3 -    559221 gga
i Otocyon_megalotis.JAEUCK010005147.1                    I 7 C 0
s Otolemur_crassicaudatus.k141_222918                         1747 2 +      8798 -AT
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             693914 2 -   1103335 -AT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    41316 3 +     80009 CAG
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189140226 3 + 189151597 CAG
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  149488 3 +    230217 gga
i Panthera_onca.PanOnc_flattened_line_3271               I 7 C 0
s Panthera_pardus.KV860321.1                                262693 3 +  18783137 gga
i Panthera_pardus.KV860321.1                             I 7 C 0
s Panthera_tigris.KE722367.1                               4719330 3 -   8748460 gga
i Panthera_tigris.KE722367.1                             I 7 C 0
s Papio_anubis.CM001495.2                                183440415 3 + 183742232 CAG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             4108 3 +     20448 CAG
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20560914 3 +  20919399 CAG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   2852 3 +     41871 CAG
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     6138 3 +     27711 CAG
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  6217 3 +      9205 CAG
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10951 3 -     78924 gga
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 8 C 0
s Perodicticus_ibeanus.k141_855320                            7874 2 +     13100 -AT
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             6252 2 +     25941 -at
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18191749 3 -  18517816 CAA
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Piliocolobus_badius.k141_1234363                           40885 3 +     62158 CAG
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        35614 3 +     89929 CAG
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            37030 3 +     51399 CAG
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14293268 3 -  14605196 CAG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189128341 3 + 189387572 CAG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9567949 3 +   9816681 CAG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               70540 3 -     81375 CAG
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              2360 3 +     19060 CAG
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 10355 3 -     22811 taa
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2594625 3 -   4620579 CAG
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     988616 3 +   2598838 CAG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          26926 3 +     38485 CAG
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             3086 3 +      4256 cag
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          24446 3 +     35766 CAG
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           2629 3 -     24134 CAG
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        26443 3 -     67325 cag
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           2679 3 -      6182 CAG
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             7483 3 -     21651 taa
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            12985 2 -     21811 -at
i Pteronotus_parnellii.KE909381.1                        I 1 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         38534 3 +     42204 gga
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 7 C 0
s Pteropus_alecto.KB030862.1                              22975092 3 +  28871421 cag
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1358181 3 +   4952924 cag
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20272607 3 -  38429054 gga
i Puma_concolor.QAVW01001104.1                           I 7 C 0
s Pygathrix_cinerea.k141_1153803                             12375 3 -     91421 CAG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7606501 3 +   7812017 CAG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             12349 3 -     72585 CAG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53568001 3 +  90668790 CAA
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             4056 3 -     11128 CAG
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91233411 3 - 195417433 CAG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7669060 3 +   7961872 CAG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                86093 3 -     96226 cag
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               5275 3 -      8359 CAG
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            11583 3 -     13588 CAG
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              5221 3 -      6207 CAG
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               10948 3 +     13640 CAG
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               5811 3 +      8564 CAG
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209466088 3 + 209938924 CAG
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 5302 3 -      9399 CAG
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 2448 3 +      3421 CAG
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119948626 3 - 121099817 CAG
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       21093 3 +     46362 CAG
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               21188 3 +     45824 CAG
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             37803 3 -     64574 CAG
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                                809 3 -     23631 CAG
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 21081 3 -     61129 CAG
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          16883 3 -     19888 CAG
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      24086 3 +     39453 CAG
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            4612 3 +     27826 CAG
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             4132 3 -     19483 CAG
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      4194 3 +      7198 CAG
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         12454 3 +     15514 CAG
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11155 3 -     12148 CAA
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               2113 3 +   1910179 cgt
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1950670 3 -   3870691 cag
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             29049 3 +     97271 gga
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 7 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              16636 3 -    196729 gga
i Suricata_suricatta.SurSur_flattened_line_6629          I 8 C 0
s Sus_scrofa.JH118708.1                                      33831 3 -     47482 taa
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1090663 3 -   1523678 CAG
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 8927 3 +     41958 cag
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 70430 3 +    116680 cag
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      117051 3 -    156842 gaa
i Tapirus_indicus.TapInd_scaffold_9301                   I 3 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    385504 3 +    539355 gaa
i Tapirus_terrestris.TapTer_scaffold_755                 I 3 C 0
s Tarsius_lariang.k141_2201908                               23990 3 +     70052 cag
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_2029956                               3335 3 +      4644 cag
i Tarsius_wallacei.k141_2029956                          C 0 C 0
s Theropithecus_gelada.CM009954.1                        186425780 3 + 186847797 CAG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   2995 3 +      8208 cag
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Trachypithecus_auratus.k141_722599                          8185 3 -     20410 CAG
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    12379 3 +     15221 CAG
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        8286 3 +     19930 CAG
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       4715 3 -     19997 CAG
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            44835 3 -     60166 CAG
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        12307 3 -     27529 CAG
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     12249 3 -     18194 CAG
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           5982 3 -     21137 CAG
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    4685 3 -     10723 CAG
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         3837 3 +      9834 CAG
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        22153 3 +     32220 CAG
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5936252 3 +   6242583 CAG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        5500 3 +     20839 CAG
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2152739 3 +   4065304 CAG
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     6354 3 -     10553 CAG
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4848743 3 -   5085361 ggA
i Ursus_maritimus.KK499267.1                             I 7 C 0
s Varecia_rubra.k141_590885                                   9308 3 +     50397 cag
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              9362 3 +     24756 cag
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5370208 3 -   5488506 taa
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  9228 3 -     43706 gga
i Vulpes_lagopus.VulLag_flattened_line_30954             I 7 C 0
s Xerus_inauris.XerIna_scaffold_48378                        22043 3 -     24430 CAG
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          3460 3 +     86975 gta
i Zalophus_californianus.ZalCal_flattened_line_17732     I 7 C 0
e Sapajus_macrocephalus.k141_351809                          54316 0 -     80660 C
e Sapajus_apella.ctg103                                    5419275 0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519 0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188 0 +      1777 C
e Cebus_albifrons.Contig27                                25650611 0 +  26074798 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9947 50 -     10935 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383 9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553 7 +    610378 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937 0 +    114563 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823 1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813 0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805 0 +       996 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016 1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456 1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390 1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692 1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520 1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686 0 +   8254450 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009 7 -     19307 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547 0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447 1 -  14770903 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084 0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495 7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Crocidura_indochinensis.CroInd_scaffold_287352              1624 0 +      4208 I
e Condylura_cristata.JH655891.1                           17547132 5 -  53390261 I
e Chinchilla_lanigera.JH722012.1                           1251498 0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157 0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465 7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102 7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691 7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       3967 5 +     62944 G----AAC--A
s Acinonyx_jubatus.LLWD01001279.1                           825611 3 -   1699592 a----t----a
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     68224 5 +     87051 G----AAC--A
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9508868 3 -  29979442 a----t----c
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             77657 3 -    347723 a----t----c
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     71860 5 -     89534 G----AAC--A
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   11886 5 -     52922 G----AAC--C
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         11820 5 -     28001 G----AAC--C
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          2266 5 -     18505 G----AAC--C
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           3115 5 -     12518 G----AAC--C
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                               719 5 -     27731 G----AGC--A
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                 842 5 +      3134 G----AGC--A
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                                980 5 -     45847 G----AGC--A
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                22184 5 +     25266 G----AGC--A
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           1368 5 +      2906 G----AGC--A
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            15481 5 -     18578 G----AGC--A
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                               868 5 +     47717 G----AGC--A
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                              999 5 -      3544 G----AGC--A
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             12218 5 +     50774 G----AGC--A
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  12841 5 -     33861 G----AGC--A
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            12862 5 -     34016 G----AGC--A
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4295258 5 -   5030052 G----AGC--A
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             12863 5 -     34685 G----AGC--A
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               25984 5 -     47192 G----AGC--A
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       9523 5 +     20879 G----AGC--A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                        9235 5 +     14667 A----AAT--G
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Avahi_laniger.k141_765380                                  51565 5 -     92717 g----aac--a
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              52194 5 +     85213 g----aac--a
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             2606 5 -     10423 G----AAC--A
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             22105 5 +     31915 G----AGC--A
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            2576 5 +      5267 G----AGC--A
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23587790 5 - 189096842 G----AGC--A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              9320 5 -     12001 G----AGC--A
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10000711 3 -  17673402 a----a----a
i Camelus_bactrianus.KN276810.1                          C 0 I 2
s Camelus_dromedarius.KN272107.1                           2333175 3 -   7040546 a----a----a
i Camelus_dromedarius.KN272107.1                         C 0 I 2
s Camelus_ferus.KB017975.1                                  401451 3 -   1652518 a----a----a
i Camelus_ferus.KB017975.1                               C 0 I 2
s CanFam4.chr16                                           17797615 3 -  60362399 a----c----c
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    183672 3 -    185531 a----c----c
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9033058 3 -   9314153 a----c----c
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17957323 3 -  59632846 a----c----c
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18498661 3 +  63665305 a----c----c
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           153886 3 -    496798 G----AA----
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    135974 5 +    179628 g----aac--a
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     91300 3 +    217609 G----A----A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          7230 5 -     11392 G----AGC--A
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               3328 5 -      7577 G----AGC--A
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         3382 5 +     31688 g----aac--a
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12229730 3 +  27778364 a----c----a
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634            757 3 -     25243 A----C----A
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4472845 5 +   4669795 G----AAC--C
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        11392 5 -     19203 G----AAC--C
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           5814 5 +      8260 G----AAC--C
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           6041 5 +     27781 G----AAC--C
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         6197 5 -     20310 G----AAC--C
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           9176 5 +     29689 G----AAC--C
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            3606 5 +      9989 G----AAC--C
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          11855 5 -     27936 G----AAC--C
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                             730 5 -     17152 G----AAC--C
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38814260 5 +  39242232 G----AAC--C
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21219959 5 -  21565898 G----AAC--C
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       37078 5 -     53127 G----AAC--C
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        4359 5 +      7159 G----AAC--C
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       11881 5 -     27947 G----AAC--C
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         11854 5 +     17596 G----AAC--C
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          1076 5 +     26000 G----AAC--C
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            5811 5 -      6351 G----GAT--A
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             18981 5 -     52598 g----aac--a
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           14326 5 +     57038 g----aac--a
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           8253 5 +     11226 G----AGC--A
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18425817 5 -  18827391 G----AAC--C
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       12255 5 -     50209 G----AAC--C
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135419263 5 + 135778131 G----AAC--C
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 16158 5 +     19366 g----aaa--a
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            171257 5 +    839153 g----aaa--a
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1907779 5 +   2368649 G----AAC--C
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199947451 5 + 200372422 G----AAC--C
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              34322 5 +     84244 G----AAC--C
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          12308 5 -     20389 g----aac--a
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 47924 5 +     63868 G----AAC--A
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11665264 4 + 224834208 -----AAT--A
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             26788 3 -     87169 a----c----a
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    835039 5 +   1526836 t----aac--a
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            62138 5 +   2246927 g----aat--a
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12535184 5 -  12879189 g----aac--a
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  671582 3 +   1390856 a----c----a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    4338 3 +    198055 a----c----a
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE759718.1                                   8828 5 +     11740 g----aac--a
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1089369 5 +  10337057 A----AGC--A
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          17453 4 -    110024 -----AAC--A
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01109367.1                            3506 4 -      6299 -----AAC--A
i Ellobius_talpinus.LOJH01109367.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16327627 3 -  41312741 a----t----c
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1281637 3 +   4378816 a----c----a
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18529458 3 -  39960074 a----c----a
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               31473 3 +    498745 a----c----a
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21202453 5 -  21539334 G----AAC--C
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              11673 5 -     14127 G----AAC--A
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                4371 5 -     16928 G----AAC--A
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              13408 5 -     25546 G----AAC--A
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            10598 5 +     26330 G----AAC--A
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 11837 5 +     23973 G----AAC--A
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                10598 5 +     75513 g----aac--a
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  8540 5 +     97555 g----aac--a
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            11476 5 +     26496 G----AAC--A
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  2073 5 -     17153 g----aac--a
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              11649 5 +    111500 g----aac--a
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20235482 3 + 206538554 a----c----a
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20194325 3 + 205367284 A----C----A
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  7839 3 -     36744 A----C----A
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     424207 5 -    453645 a----aac--a
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             1914 5 +     11339 A----AAC--A
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1959596                            5721 5 +      6795 A----AAC--A
i Galagoides_demidoff.k141_1959596                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_197845               1919 5 -      3123 g----aac--a
i Galeopterus_variegatus.GalVar_scaffold_197845          C 0 C 0
s Gorilla_beringei.k141_3596273                              13220 5 -     32273 G----AAC--A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186335368 5 + 186649187 g----aac--a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   32389 5 +     78134 G----AAC--A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           4727 5 -     19426 G----AAC--A
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              9876 5 -     15286 G----AAC--A
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             11515 5 +     18253 G----AAC--A
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         11616 5 -     41752 G----AAC--A
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         11454 5 -     16460 G----AAC--A
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               240638 3 +    327341 A----C----A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 609 5 +       961 g----aac--a
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       110113 5 +   1711038 a----aac--a
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               41536 5 +     43066 A----AAC--A
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    432031 5 +    630532 G----AAC--A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  42764 3 +     55795 A----C----G
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_307679                               14968 5 -     15490 G----AAC--A
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              56974 5 +     67168 G----AAC--A
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189540624 5 - 191637585 G----AAC--A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3333518 5 -  11177569 G----AAC--A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7517589 5 -   7955117 g----acc--a
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   20421 5 +     31101 g----aac--a
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15521978 5 -  30322482 g----aac--a
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        4970 5 +     64341 G----AGC--A
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           2030 5 +      4941 G----AGC--A
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4898 5 +     35603 G----AGC--A
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    26370 5 +     38576 G----AGC--A
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         23067 5 +     66356 G----AGC--A
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          8859 5 -     23766 G----AAC--A
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             26806 5 +     45836 G----AAC--A
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_320948                          1030 5 -      1719 g----aac--a
i Lepilemur_ruficaudatus.k141_320948                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      24861 5 +     54090 G----AAC--A
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.APMU01168965.1                       405 3 -      1094 a----c----c
i Leptonychotes_weddellii.APMU01168965.1                 C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     3859 5 -     14121 A----AAC--T
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1434390 5 +   1826925 G----AAC--C
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            3663 5 +     11245 A----AAT--A
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1002501 5 +   6120653 A----AAT--A
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214894 5 -  43346337 g----aac--a
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17953563 3 -  59628241 a----c----c
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               4203 5 +     40492 G----AAC--C
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59673465 5 +  60120075 G----AAC--C
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  9959 5 -     26193 G----AAC--C
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            77763 5 -    114318 G----AAC--C
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  3462 5 -     23192 G----AAC--C
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                12922 5 -     29190 G----AAC--C
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  21490 5 +     37952 G----AAC--C
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186836578 5 + 187317192 G----AAC--C
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25455141 5 -  25927173 G----AAC--C
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  77339 5 +     89720 G----AAC--C
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 4336 5 +     20474 G----AAC--C
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   4138 5 -     14993 G----AAC--C
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  327008 5 -    668171 G----AAC--C
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 2448 5 -     24072 G----AAC--C
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               23077 5 -     45290 G----AAC--C
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88902 5 +     94391 G----AAC--A
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23934664 5 -  24302211 G----AAC--C
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               348797 5 +    752769 G----AAC--C
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              17761 3 +    737560 g----c----c
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              49147 3 -    317179 g----c----c
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33099900 5 -  40650429 g----acc--a
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         8650 5 -    207569 g----atc--g
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              8344 3 +     13704 a----t----c
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 29846 5 +    140813 A----AAC--A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 682
s Mesocricetus_auratus.KB708134.1                         12180324 4 -  29670104 -----TAT--A
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                3152 5 -      7380 G----AGC--A
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               2218 5 +     18990 G----AGC--A
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      3157 5 -      7356 G----AGC--A
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18289365 5 -  93316391 G----AAC--A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    16909 5 -    145209 g----agt--a
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11257963 4 -  27267610 -----AAC--A
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miopithecus_ogouensis.k141_534055                           6384 5 -     28506 G----AAC--C
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         3819 3 -      8324 a----c----c
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      6938 5 -     37649 g----aac--a
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 139596 7 -    366855 G----GGAACT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   33745 3 +     37127 A----C----A
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Mus_caroli.LT608237.1                                   84358932 5 - 120012414 G----AAC--A
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87647921 5 - 129401213 G----AAC--A
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31352589 5 -  89631738 g----aac--a
i Mus_pahari.LT608297.1                                  I 390 C 0
s Mus_spretus.CM004101.1                                  90749999 5 - 130317789 G----AAC--A
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              4678 5 +     14296 G----AAC--A
i Muscardinus_avellanarius.MusAve_scaffold_82313         T 1492 C 0
s Mustela_putorius.JH418006.1                               299525 3 -  14710649 a----t----c
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187079 5 +    196477 g----agt--a
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nasalis_larvatus.k141_413338                               12380 5 +     21681 G----AAC--C
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9147821 3 -   9404916 a----c----c
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102577424 5 - 196305487 a----aat--a
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             5110 5 +      8486 a----aat--a
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105747851 5 + 199412804 a----aat--a
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1360942 5 +   3988456 a----aac--t
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              504969 3 -   2017862 c----a----c
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   22079 4 +     28053 -----AAC--A
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    77153 4 +    102263 -----AAC--A
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               7426 5 -     18566 g----aat--a
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67144704 5 + 174332312 a----aac--t
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       460577 3 -    559221 a----c----c
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         1749 5 +      8798 A----AAC--A
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             693916 5 -   1103335 A----AAC--A
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    41319 5 +     80009 G----AAC--A
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189140229 5 + 189151597 G----AAC--A
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  149491 3 +    230217 a----c----a
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                262696 3 +  18783137 a----c----a
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4719333 3 -   8748460 a----c----a
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183440418 5 + 183742232 G----AAC--C
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             4111 5 +     20448 G----AAC--C
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20560917 5 +  20919399 G----AAC--C
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   2855 5 +     41871 G----AAC--C
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     6141 5 +     27711 G----AAC--C
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  6220 5 +      9205 G----AAC--C
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10954 3 -     78924 a----t----g
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            7876 5 +     13100 A----AAC--G
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             6254 5 +     25941 a----aac--g
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18191752 4 -  18517816 -----AAC--A
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Piliocolobus_badius.k141_1234363                           40888 5 +     62158 G----AAC--C
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        35617 5 +     89929 G----AAC--C
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            37033 5 +     51399 G----AAC--C
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14293271 5 -  14605196 G----AAC--C
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189128344 5 + 189387572 G----AAC--A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9567952 5 +   9816681 G----AAC--A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               70543 5 -     81375 G----AAC--C
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              2363 5 +     19060 G----AAC--C
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 10358 5 -     22811 g----aac--a
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2594628 5 -   4620579 G----AAC--A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     988619 5 +   2598838 G----AAC--A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          26929 5 +     38485 G----AAC--A
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             3089 5 +      4256 g----aac--a
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          24449 5 +     35766 G----AAC--A
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           2632 5 -     24134 G----AAC--A
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        26446 5 -     67325 g----aac--a
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           2682 5 -      6182 G----AAC--A
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             7486 5 -     21651 a----aac--a
i Psammomys_obesus.NESX01036370.1                        C 0 I 684
s Pteronotus_parnellii.KE909381.1                            12987 7 -     21811 g----ggacct
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         38537 3 +     42204 a----t----c
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22975095 5 +  28871421 g----gac--a
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1358184 5 +   4952924 g----gac--a
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20272610 3 -  38429054 a----c----a
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             12378 5 -     91421 G----AAC--C
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7606504 5 +   7812017 G----AAC--C
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             12352 5 -     72585 G----AAC--C
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53568004 5 +  90668790 G----AAC--A
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             4059 5 -     11128 G----AAC--C
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91233414 5 - 195417433 G----AAC--C
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7669063 5 +   7961872 G----AAC--C
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                86096 5 -     96226 g----aat--a
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               5278 5 -      8359 G----AGC--A
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            11586 5 -     13588 G----AGC--A
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              5224 5 -      6207 G----AGC--A
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               10951 5 +     13640 G----AGC--A
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               5814 5 +      8564 G----AGC--A
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209466091 5 + 209938924 G----AGC--A
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 5305 5 -      9399 G----AGC--A
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 2451 5 +      3421 G----AGC--A
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119948629 5 - 121099817 G----AAC--A
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       21096 5 +     46362 G----AAC--A
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               21191 5 +     45824 G----AAC--A
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             37806 5 -     64574 G----AAC--A
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                                812 5 -     23631 G----AAC--A
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 21084 5 -     61129 G----AAC--A
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          16886 5 -     19888 G----AAC--C
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      24089 5 +     39453 G----AAC--C
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            4615 5 +     27826 G----AAC--C
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             4135 5 -     19483 G----AAC--C
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      4197 5 +      7198 G----AAC--C
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         12457 5 +     15514 G----AAC--C
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11158 4 -     12148 -----AAC--A
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               2116 7 +   1910179 gggtaa----g
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1950673 5 -   3870691 g----acc--a
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             29052 3 +     97271 a----t----c
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              16639 3 -    196729 a----c----a
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.JH118708.1                                      33834 3 -     47482 g----a----g
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1090666 5 -   1523678 G----AAC--A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 8930 5 +     41958 g----gac--t
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 70433 5 +    116680 g----aat--a
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      117054 3 -    156842 a----t----g
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    385507 3 +    539355 a----t----g
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               23993 5 +     70052 g----aat--a
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_2029956                               3338 5 +      4644 g----aat--a
i Tarsius_wallacei.k141_2029956                          C 0 C 0
s Theropithecus_gelada.CM009954.1                        186425783 5 + 186847797 G----AAC--C
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   2998 5 +      8208 g----aat--a
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Trachypithecus_auratus.k141_722599                          8188 5 -     20410 G----AAC--C
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    12382 5 +     15221 G----AAC--C
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        8289 5 +     19930 G----AAC--C
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       4718 5 -     19997 G----AAC--C
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            44838 5 -     60166 G----AAC--C
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        12310 5 -     27529 G----AAC--C
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     12252 5 -     18194 G----AAC--C
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           5985 5 -     21137 G----AAC--C
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    4688 5 -     10723 G----AAC--C
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         3840 5 +      9834 G----AAC--C
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        22156 5 +     32220 G----AAC--C
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5936255 5 +   6242583 G----AAC--C
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        5503 5 +     20839 G----AAC--C
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2152742 5 +   4065304 G----AGC--G
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     6357 5 -     10553 G----AGC--A
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4848746 3 -   5085361 A----C----C
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   9311 5 +     50397 g----aac--a
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              9365 5 +     24756 g----aac--a
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5370211 3 -   5488506 a----a----a
i Vicugna_pacos.KN270157.1                               C 0 I 2
s Vulpes_lagopus.VulLag_flattened_line_30954                  9231 3 -     43706 a----c----c
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        22046 5 -     24430 G----AAC--A
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          3463 3 +     86975 a----c----c
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Sapajus_macrocephalus.k141_351809                          54316 0 -     80660 C
e Sapajus_apella.ctg103                                    5419275 0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519 0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188 0 +      1777 C
e Cebus_albifrons.Contig27                                25650611 0 +  26074798 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9947 50 -     10935 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383 9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553 7 +    610378 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937 0 +    114563 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823 1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813 0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805 0 +       996 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016 1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456 1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390 1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692 1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520 1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686 0 +   8254450 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009 7 -     19307 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547 0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447 1 -  14770903 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084 0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495 7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Crocidura_indochinensis.CroInd_scaffold_287352              1624 0 +      4208 I
e Condylura_cristata.JH655891.1                           17547132 5 -  53390261 I
e Chinchilla_lanigera.JH722012.1                           1251498 0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157 0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465 7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102 7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691 7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       3972 3 +     62944 T-GA
s Acinonyx_jubatus.LLWD01001279.1                           825614 3 -   1699592 t-ga
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     68229 3 +     87051 C-AA
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9508871 3 -  29979442 t-ga
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             77660 3 -    347723 t-ga
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     71865 3 -     89534 T-GA
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   11891 3 -     52922 T-GA
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         11825 3 -     28001 T-GA
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          2271 3 -     18505 T-GA
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           3120 3 -     12518 T-GA
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                               724 3 -     27731 T-GA
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                 847 3 +      3134 T-GA
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                                985 3 -     45847 T-GA
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                22189 3 +     25266 T-GA
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           1373 3 +      2906 T-GA
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            15486 3 -     18578 T-GA
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                               873 3 +     47717 T-GA
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             1004 3 -      3544 T-GA
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             12223 3 +     50774 T-GA
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  12846 3 -     33861 T-GA
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            12867 3 -     34016 T-GA
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4295263 3 -   5030052 T-GA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             12868 3 -     34685 T-GA
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               25989 3 -     47192 T-GA
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       9528 3 +     20879 T-GA
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                        9240 3 +     14667 T-GA
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Avahi_laniger.k141_765380                                  51570 3 -     92717 t-ga
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              52199 3 +     85213 t-ga
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             2611 3 -     10423 T-GA
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             22110 3 +     31915 T-GA
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            2581 3 +      5267 T-GA
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23587795 3 - 189096842 T-GA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              9325 3 -     12001 T-GA
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10000716 3 -  17673402 t-ga
i Camelus_bactrianus.KN276810.1                          I 2 C 0
s Camelus_dromedarius.KN272107.1                           2333180 3 -   7040546 t-ga
i Camelus_dromedarius.KN272107.1                         I 2 C 0
s Camelus_ferus.KB017975.1                                  401456 3 -   1652518 t-ga
i Camelus_ferus.KB017975.1                               I 2 C 0
s CanFam4.chr16                                           17797618 3 -  60362399 t-ga
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    183675 3 -    185531 t-ga
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9033061 3 -   9314153 t-ga
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17957326 3 -  59632846 t-ga
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18498664 3 +  63665305 t-ga
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    135979 3 +    179628 t-ga
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     91303 3 +    217609 T-AA
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          7235 3 -     11392 T-GA
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               3333 3 -      7577 T-GA
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         3387 3 +     31688 t-ga
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12229733 3 +  27778364 t-aa
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634            760 3 -     25243 T-AA
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4472850 3 +   4669795 T-GA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        11397 3 -     19203 T-GA
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           5819 3 +      8260 T-GA
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           6046 3 +     27781 T-GA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         6202 3 -     20310 T-GA
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           9181 3 +     29689 T-GA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            3611 3 +      9989 T-GA
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          11860 3 -     27936 T-GA
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                             735 3 -     17152 T-GA
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38814265 3 +  39242232 T-GA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21219964 3 -  21565898 T-GA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       37083 3 -     53127 T-GA
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        4364 3 +      7159 T-GA
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       11886 3 -     27947 T-GA
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         11859 3 +     17596 T-GA
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          1081 4 +     26000 TTGA
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            5816 3 -      6351 C-GA
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             18986 3 -     52598 t-ga
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           14331 3 +     57038 t-ga
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           8258 3 +     11226 T-GA
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18425822 3 -  18827391 T-GA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       12260 3 -     50209 T-GA
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135419268 3 + 135778131 T-GA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 16163 3 +     19366 t-aa
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            171262 3 +    839153 t-aa
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1907784 3 +   2368649 T-GA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199947456 3 + 200372422 T-GA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              34327 3 +     84244 T-GA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          12313 3 -     20389 t-gg
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 47929 3 +     63868 C-AA
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11665268 3 + 224834208 C-AA
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             26791 3 -     87169 t-ga
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    835044 3 +   1526836 t-ga
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            62143 3 +   2246927 t-ga
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12535189 3 -  12879189 t-aa
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  671585 3 +   1390856 c-aa
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    4341 3 +    198055 t-aa
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE759718.1                                   8833 3 +     11740 t-gg
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1089374 3 +  10337057 T-GA
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          17457 3 -    110024 C-AA
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01109367.1                            3510 3 -      6299 C-AA
i Ellobius_talpinus.LOJH01109367.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16327630 3 -  41312741 t-ga
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1281640 3 +   4378816 t-aa
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18529461 3 -  39960074 t-aa
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               31476 3 +    498745 t-aa
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21202458 3 -  21539334 T-GA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              11678 3 -     14127 T-GG
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                4376 3 -     16928 T-GA
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              13413 3 -     25546 T-GA
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            10603 3 +     26330 T-GA
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 11842 3 +     23973 T-GA
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                10603 3 +     75513 t-ga
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  8545 3 +     97555 t-ga
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            11481 3 +     26496 T-GA
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  2078 3 -     17153 t-ga
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              11654 3 +    111500 t-gg
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20235485 3 + 206538554 t-ga
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20194328 3 + 205367284 T-GA
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  7842 3 -     36744 T-GA
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     424212 3 -    453645 g-ga
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             1919 3 +     11339 G-GA
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1959596                            5726 3 +      6795 G-GA
i Galagoides_demidoff.k141_1959596                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_197845               1924 3 -      3123 t-ga
i Galeopterus_variegatus.GalVar_scaffold_197845          C 0 C 0
s Gorilla_beringei.k141_3596273                              13225 3 -     32273 T-GA
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186335373 3 + 186649187 t-ga
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   32394 3 +     78134 T-GA
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           4732 3 -     19426 T-GA
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              9881 3 -     15286 T-GA
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             11520 3 +     18253 T-GA
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         11621 3 -     41752 T-GA
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         11459 3 -     16460 T-GA
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               240641 3 +    327341 T-GA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 614 3 +       961 t-ga
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       110118 3 +   1711038 t-gg
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               41541 3 +     43066 T-GG
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    432036 3 +    630532 T-GA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  42767 3 +     55795 T-GA
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_307679                               14973 3 -     15490 T-GA
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              56979 3 +     67168 T-GA
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189540629 3 - 191637585 T-GA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3333523 3 -  11177569 T-GA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7517594 3 -   7955117 a-ga
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   20426 3 +     31101 t-ga
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15521983 3 -  30322482 t-ga
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        4975 3 +     64341 T-GA
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           2035 3 +      4941 T-GA
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4903 3 +     35603 T-GA
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    26375 2 +     38576 T--A
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         23072 2 +     66356 T--A
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          8864 3 -     23766 T-GA
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             26811 3 +     45836 T-GA
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_320948                          1035 3 -      1719 t-ga
i Lepilemur_ruficaudatus.k141_320948                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      24866 3 +     54090 T-GA
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.APMU01168965.1                       408 3 -      1094 t-ga
i Leptonychotes_weddellii.APMU01168965.1                 C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     3864 3 -     14121 T-AA
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1434395 3 +   1826925 T-GA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            3668 3 +     11245 T-GA
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1002506 3 +   6120653 T-GA
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214899 3 -  43346337 c-ga
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17953566 3 -  59628241 t-ga
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               4208 3 +     40492 T-GA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59673470 3 +  60120075 T-GA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  9964 3 -     26193 T-GA
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            77768 3 -    114318 T-GA
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  3467 3 -     23192 T-GA
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                12927 3 -     29190 T-GA
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  21495 3 +     37952 T-GA
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186836583 3 + 187317192 T-GA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25455146 3 -  25927173 T-GA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  77344 3 +     89720 T-GA
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 4341 3 +     20474 T-GA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   4143 3 -     14993 T-GA
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  327013 3 -    668171 T-GA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 2453 3 -     24072 T-GA
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               23082 3 -     45290 T-GA
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88907 3 +     94391 T-GG
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23934669 3 -  24302211 T-GG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               348802 3 +    752769 T-GA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33099905 3 -  40650429 a-ga
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         8655 3 -    207569 t-gg
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              8347 3 +     13704 t-ga
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 30533 3 +    140813 C-AA
i Meriones_unguiculatus.MerUng_scaffold_7390             I 682 C 0
s Mesocricetus_auratus.KB708134.1                         12180328 3 -  29670104 C-AA
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                3157 3 -      7380 T-GA
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               2223 3 +     18990 T-GA
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      3162 3 -      7356 T-GA
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18289370 3 -  93316391 T-AA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    16914 3 -    145209 g-aa
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 560
s Microtus_ochrogaster.CM001695.1                         11257967 3 -  27267610 C-AA
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miopithecus_ogouensis.k141_534055                           6389 3 -     28506 T-GA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         3822 3 -      8324 t-ga
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      6943 3 -     37649 t-ga
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 139603 3 -    366855 T-AG
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   33748 3 +     37127 T-GA
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Mus_caroli.LT608237.1                                   84358937 3 - 120012414 A-AA
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87647926 3 - 129401213 C-AA
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31352594 3 -  89631738 C-AA
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90750004 3 - 130317789 C-AA
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              4683 3 +     14296 C-AA
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               299528 3 -  14710649 t-ga
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187084 3 +    196477 t-ag
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nasalis_larvatus.k141_413338                               12385 3 +     21681 T-GA
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9147824 3 -   9404916 t-ga
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102577429 3 - 196305487 t-ga
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             5115 3 +      8486 t-ga
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105747856 3 + 199412804 t-ga
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1360947 3 +   3988456 t-ga
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              504972 3 -   2017862 t-ga
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   22083 3 +     28053 C-AA
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    77157 3 +    102263 C-AG
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               7431 3 -     18566 t-ga
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 I 6
s Oryctolagus_cuniculus.CM000791.1                        67144709 3 + 174332312 t-ga
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       460580 3 -    559221 t-ga
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         1754 3 +      8798 G-GA
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             693921 3 -   1103335 G-GA
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    41324 3 +     80009 T-GA
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189140234 3 + 189151597 T-GA
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  149494 3 +    230217 t-ga
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                262699 3 +  18783137 t-ga
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4719336 3 -   8748460 t-ga
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183440423 3 + 183742232 T-GA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             4116 3 +     20448 T-GA
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20560922 3 +  20919399 T-GA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   2860 3 +     41871 T-GA
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     6146 3 +     27711 T-GA
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  6225 3 +      9205 T-GA
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10957 3 -     78924 t-aa
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            7881 3 +     13100 T-GA
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             6259 3 +     25941 t-ga
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18191756 3 -  18517816 C-AA
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Piliocolobus_badius.k141_1234363                           40893 3 +     62158 T-GA
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        35622 3 +     89929 T-GA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            37038 3 +     51399 T-GA
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14293276 3 -  14605196 T-GA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189128349 3 + 189387572 T-GA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9567957 3 +   9816681 T-GA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               70548 3 -     81375 T-GA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              2368 3 +     19060 T-GA
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 10363 3 -     22811 t-ga
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2594633 3 -   4620579 T-GA
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     988624 3 +   2598838 T-GA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          26934 3 +     38485 T-GA
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             3094 3 +      4256 t-ga
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          24454 3 +     35766 T-GA
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           2637 3 -     24134 T-GA
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        26451 3 -     67325 t-ga
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           2687 3 -      6182 T-GA
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             8175 3 -     21651 C-AA
i Psammomys_obesus.NESX01036370.1                        I 684 C 0
s Pteronotus_parnellii.KE909381.1                            12994 3 -     21811 t-ag
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         38540 3 +     42204 t-ga
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22975100 2 +  28871421 t-a-
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1358189 2 +   4952924 t-g-
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20272613 3 -  38429054 t-ga
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             12383 3 -     91421 T-GA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7606509 3 +   7812017 T-GA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             12357 3 -     72585 T-GA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53568009 3 +  90668790 C-AA
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             4064 3 -     11128 T-GA
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91233419 3 - 195417433 T-GA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7669068 3 +   7961872 T-GA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                86101 3 -     96226 t-gg
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               5283 3 -      8359 T-GA
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            11591 3 -     13588 T-GA
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              5229 3 -      6207 T-GA
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               10956 3 +     13640 T-GA
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               5819 3 +      8564 T-GA
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209466096 3 + 209938924 T-GA
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 5310 3 -      9399 T-GA
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 2456 3 +      3421 T-GA
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119948634 3 - 121099817 T-GA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       21101 3 +     46362 T-GA
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               21196 3 +     45824 T-GA
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             37811 3 -     64574 T-GA
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                                817 3 -     23631 T-GA
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 21089 3 -     61129 T-GA
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          16891 3 -     19888 T-GA
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      24094 3 +     39453 T-GA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            4620 3 +     27826 T-GA
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             4140 3 -     19483 T-GA
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      4202 3 +      7198 T-GA
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         12462 3 +     15514 T-GA
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11162 3 -     12148 C-AA
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               2123 3 +   1910179 t-aa
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1950678 3 -   3870691 a-ga
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             29055 3 +     97271 t-ga
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              16642 3 -    196729 t-ga
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.JH118708.1                                      33837 3 -     47482 t-aa
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1090671 3 -   1523678 T-GA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 8935 3 +     41958 t-gg
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 70438 3 +    116680 t-ag
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      117057 3 -    156842 t-aa
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    385510 3 +    539355 t-aa
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               23998 3 +     70052 t-ga
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_2029956                               3343 3 +      4644 t-ga
i Tarsius_wallacei.k141_2029956                          C 0 C 0
s Theropithecus_gelada.CM009954.1                        186425788 3 + 186847797 T-GA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   3003 3 +      8208 c-ga
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Trachypithecus_auratus.k141_722599                          8193 3 -     20410 T-GA
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    12387 3 +     15221 T-GA
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        8294 3 +     19930 T-GA
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       4723 3 -     19997 T-GA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            44843 3 -     60166 T-GA
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        12315 3 -     27529 T-GA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     12257 3 -     18194 T-GA
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           5990 3 -     21137 T-GA
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    4693 3 -     10723 T-GA
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         3845 3 +      9834 T-GA
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        22161 3 +     32220 T-GA
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5936260 3 +   6242583 T-GA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        5508 3 +     20839 T-GA
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2152747 3 +   4065304 T-GA
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     6362 3 -     10553 T-GA
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4848749 3 -   5085361 t-ga
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   9316 3 +     50397 t-ga
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              9370 3 +     24756 t-ga
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5370216 3 -   5488506 t-ga
i Vicugna_pacos.KN270157.1                               I 2 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  9234 3 -     43706 t-ga
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        22051 3 -     24430 A-GA
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          3466 3 +     86975 t-ga
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Sapajus_macrocephalus.k141_351809                          54316 0 -     80660 C
e Sapajus_apella.ctg103                                    5419275 0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519 0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188 0 +      1777 C
e Cebus_albifrons.Contig27                                25650611 0 +  26074798 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9947 50 -     10935 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383 9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553 7 +    610378 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937 0 +    114563 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823 1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813 0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805 0 +       996 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016 1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456 1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390 1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692 1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520 1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686 0 +   8254450 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009 7 -     19307 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Manis_pentadactyla.KN006162.1                              49150 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              17764 0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547 0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447 1 -  14770903 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084 0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495 7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Crocidura_indochinensis.CroInd_scaffold_287352              1624 0 +      4208 I
e Condylura_cristata.JH655891.1                           17547132 5 -  53390261 I
e Chinchilla_lanigera.JH722012.1                           1251498 0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157 0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465 7 -     11696 I
e Carlito_syrichta.NW_007259797.1                           153889 0 -    496798 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102 7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691 7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       3975 32 +     62944 ATTCCCAGAAG-------GCAGGAATCAC-------ATG-TTATTT--------------G
s Acinonyx_jubatus.LLWD01001279.1                           825617 24 -   1699592 attcctgaaag-------gtaggaatcat-------gt-----------------------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 8
s Acomys_cahirinus.AcoCah_scaffold_12655                     68232 16 +     87051 ATTTTGTAATG-------ATGTG--------------------------------------
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9508874 24 -  29979442 attcctagaag-------gtatgaatcat-------gt-----------------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 8
s Ailurus_fulgens.LNAC01001112.1                             77663 24 -    347723 gttcctggaag-------gtaggaatcat-------gt-----------------------
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 8
s Allactaga_bullata.AllBul_scaffold_9566                     71868 16 -     89534 ATTGCTAGAAG-------GTGGG--------------------------------------
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   11894 32 -     52922 AATCCCAGAAG-------GCAGGAATCAG-------GTG-TTATTT--------------G
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         11828 32 -     28001 ATTCCCAGAAG-------GCAGGAATCAG-------GTG-TTATCT--------------G
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          2274 32 -     18505 AATCCCAGAAG-------GCAGGAATCAG-------GTG-TTATCT--------------G
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           3123 32 -     12518 AATCCCAGAAG-------GCAGGAATCAG-------GTG-TTATCT--------------G
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                               727 32 -     27731 ATTCCCAGTAG-------GCAGGAATCAA-------GTG-TTATTT--------------A
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                 850 32 +      3134 ATTCCTGGTAG-------GCAGGAATCAA-------GTG-TTATTT--------------A
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                                988 32 -     45847 ATTCCCAGTAG-------GCAGGAATCAA-------GTG-TTATTT--------------A
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                22192 32 +     25266 ATTCCCGGTAG-------GCAGGAATCAA-------GTG-TTATTT--------------A
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           1376 32 +      2906 ATTCCCGGTAG-------GCAGGAATCAA-------GTG-TTATTT--------------A
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            15489 32 -     18578 ATTCCCGGTAG-------GCAGGAATCAA-------GTG-TTATTT--------------A
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                               876 32 +     47717 ATTCCCGGTAG-------GCAGGAATCAA-------GTG-TTATTT--------------A
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             1007 32 -      3544 ATTCCCGGTAG-------GCAGGAATCAA-------GTG-TTATTT--------------A
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             12226 32 +     50774 ATTCCCGGTAG-------GCAGGAATCAA-------GTG-TTATTT--------------A
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  12849 32 -     33861 ATTCCTGGTAG-------GCAGGAATCAG-------GTG-TTATTT--------------A
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            12870 32 -     34016 ATTCCTGGTAG-------GCAGGAATCAG-------GTG-TTATTT--------------A
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4295266 32 -   5030052 ATTCCTGGTAG-------GCAGGAATCAG-------GTG-TTATTT--------------A
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             12871 32 -     34685 ATTCCTGGTAG-------GCAGGAATCAG-------GTG-TTATTT--------------A
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               25992 32 -     47192 ATTCCTGGTAG-------GCAGGAATCAG-------GTG-TTATTT--------------A
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       9531 46 +     20879 ATTTCTAGAAG-------CCGGGTGCCAT-------AGT-TTGGAAATGAAGTACCCTCTA
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 316
s Arctocebus_calabarensis.k141_2318572                        9243 32 +     14667 ATTCCTGGAAG-------GCAGAAATCAG-------GTG-TGATTT--------------A
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Avahi_laniger.k141_765380                                  51573 32 -     92717 attcctagaag-------gcaggaatcag-------gtg-tgattt--------------a
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              52202 32 +     85213 attcctagaag-------gcaggaaTCAG-------GTG-TGATTT--------------A
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             2614 31 -     10423 ATTCCAGGTAC-------ACAGGAATCAC-------G-G-TTATTT--------------A
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             22113 32 +     31915 ATTCCCGGTAG-------GCAGGAATCAG-------GTG-TTATTT--------------A
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            2584 31 +      5267 ATTCCCGGTAC-------GCAGGAATCAG-------G-G-TTATTT--------------A
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23587798 31 - 189096842 ATTCCCGGTAC-------GCAGGAATCAG-------G-G-TTATTT--------------A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              9328 31 -     12001 ATTCCCGGTAC-------GCAGGAATCAG-------G-G-TTATTT--------------A
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10000719 24 -  17673402 atccccagaac-------gtaggaatcat-------gt-----------------------
i Camelus_bactrianus.KN276810.1                          C 0 I 8
s Camelus_dromedarius.KN272107.1                           2333183 24 -   7040546 atccccagaac-------gtaggaatcat-------gt-----------------------
i Camelus_dromedarius.KN272107.1                         C 0 I 8
s Camelus_ferus.KB017975.1                                  401459 24 -   1652518 atccccagaac-------gtaggaatcat-------gt-----------------------
i Camelus_ferus.KB017975.1                               C 0 I 8
s CanFam4.chr16                                           17797621 24 -  60362399 attcctagaag-------gtacaaatcat-------gt-----------------------
i CanFam4.chr16                                          C 0 I 8
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    183678 24 -    185531 attcctagaag-------gtacaaatcat-------gt-----------------------
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 I 8
s Canis_lupus_dingo.QKWQ01000480.1                         9033064 24 -   9314153 attcctagaag-------gtacaaatcat-------gt-----------------------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 8
s Canis_lupus_familiaris.chr16                            17957329 24 -  59632846 attcctagaag-------gtacaaatcat-------gt-----------------------
i Canis_lupus_familiaris.chr16                           C 0 I 8
s Canis_lupus_orion.HG994398.1                            18498667 24 +  63665305 attcctagaag-------gtacaaatcat-------gt-----------------------
i Canis_lupus_orion.HG994398.1                           C 0 I 8
s Carlito_syrichta.NW_007259797.1                           153889 22 -    496798 ----------G-------GCAAGAATCAG-------ATG-TTGTTT--------------G
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    135982 31 +    179628 attcatggaag-------gtaggaattag-------gta-tgattt---------------
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 1
s Catagonus_wagneri.CatWag_scaffold_2839                     91306 24 +    217609 ATTCCTGGAAG-------TTAGAAATCAC-------TT-----------------------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 1
s Cebuella_niveiventris.k141_1251222                          7238 31 -     11392 ACTCCCGGTAG-------GCAGGAATCAG-------G-G-TTATTT--------------A
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               3336 31 -      7577 ACTCCCGGTAC-------GCAGGAATCAG-------G-G-TTATTT--------------A
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         3390 32 +     31688 attcctggaag-------gcaagaatcag-------atg-ttgttt--------------g
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12229736 24 +  27778364 attcctggaag-------gtaagaatcat-------at-----------------------
i Ceratotherium_simum.JH767749.1                         C 0 I 8
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634            763 24 -     25243 ATTCCTGGAAG-------GTAAGAATCAT-------AT-----------------------
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 I 8
s Cercocebus_atys.KQ010504.1                               4472853 32 +   4669795 AATCCCAGAAG-------GCAGGAATCAG-------GTG-TTATTT--------------G
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        11400 32 -     19203 AATCCCAGAAG-------GCAGGAATCAG-------GTG-TTATTT--------------G
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           5822 32 +      8260 AATCCCAGAAG-------GCAGGAATCAG-------GTG-TTATTT--------------G
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           6049 32 +     27781 AATCCCAGAAG-------GCAGGAATCAG-------GTG-TTATTT--------------G
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         6205 32 -     20310 ATTCCCAGAAG-------GCAGGAATCAG-------GTG-TTATCT--------------G
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           9184 32 +     29689 ATTCCCAGAAG-------GCAGGAATCAG-------GTG-TTATCT--------------G
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            3614 32 +      9989 ATTCCCAGAAG-------GCAGGAATCAG-------GTG-TTATCT--------------G
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          11863 32 -     27936 ATTCCCAGAAG-------GCAGGAATCAG-------GTG-TTATCT--------------G
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                             738 32 -     17152 ATTCCCAGAAG-------GCAGGAATCAG-------GTG-TTATCT--------------G
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38814268 32 +  39242232 ATTCCCAGAAG-------GCAGGAATCAG-------GTG-TTATCT--------------G
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21219967 32 -  21565898 ATTCCCAGAAG-------GCAGGAATCAG-------GTG-TTATCT--------------G
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       37086 32 -     53127 ATTCCCAGAAG-------GCAGGAATCAG-------GTG-TTATCT--------------G
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        4367 32 +      7159 ATTCCCAGAAG-------GCAGGAATCAG-------GTG-TTATCT--------------G
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       11889 32 -     27947 ATTCCCAGAAG-------GCAGGAATCAG-------GTG-TTACCT--------------G
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         11862 32 +     17596 ATTCCCAGAAG-------GCAGGAATCAG-------GTG-TTATCT--------------G
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          1085 32 +     26000 ATTCCCAGAAG-------GCAGGAATCAG-------GTG-TCATCT--------------G
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            5819 32 -      6351 ATTGCTGCTAG-------GCAGGAAAAGT-------GCA-TTGTTT--------------G
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             18989 32 -     52598 atttctggaag-------gcagCAATCAG-------GTG-TGATTT--------------A
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           14334 32 +     57038 atttctggaag-------gcaggaaTCAG-------GTG-TGATTT--------------A
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           8261 32 +     11226 ATTCCCGGTAG-------GCAGGTATCAG-------GTG-TTATTT--------------A
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18425825 32 -  18827391 ATTCCCAGGAG-------GCAGGAATCAG-------GTG-TTATCT--------------G
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       12263 32 -     50209 ATTCCCAGGAG-------GCAGGAATCAG-------GTG-TTATCT--------------G
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135419271 32 + 135778131 ATTCCCAGGAG-------GCAGGAATCAG-------GTG-TTATCT--------------G
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 16166 30 +     19366 attgctgcaaa-------gcatgaaag---------gtg-ttgttt--------------g
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            171265 30 +    839153 attgctgcaaa-------gcatgaaag---------gtg-ttgttt--------------g
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1907787 32 +   2368649 ATtcccagaag-------gaaggaattag-------GTG-TTATTT--------------G
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199947459 32 + 200372422 ATTCCCAGAAG-------GAAGGAATTAG-------GTG-TTATTT--------------G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              34330 32 +     84244 ATTCCCAGAAG-------GAAGGAATTAG-------GTG-TTATTT--------------G
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          12316 32 -     20389 attcctggaag-------gtagggatcgt-------gtg-ttattt--------------g
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 47932 16 +     63868 ACTTCTGAATG-------GCAAG--------------------------------------
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11665271 16 + 224834208 ATTTCCTAATG-------GCAAG--------------------------------------
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             26794 24 -     87169 attcctagaag-------gtaggaatcat-------gt-----------------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 8
s Ctenodactylus_gundi.CteGun_scaffold_65                    835047 37 +   1526836 attcttagaaggtgaag-ataaggatcag-------gtg-ttac-t--------------a
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 1
s Dasypus_novemcinctus.JH564415.1                            62146 32 +   2246927 attgctgcaca-------gcaggaaactt-------gta-ttgttt--------------g
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12535192 32 -  12879189 attcctggaag-------gcaggtatcag-------gtg-tgattt--------------g
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  671588 24 +   1390856 attcctggaag-------gtaagaatcat-------at-----------------------
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 8
s Diceros_bicornis.DicBicMic_scaffold_5955                    4344 24 +    198055 attcctggaag-------gtaagaatcat-------at-----------------------
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 8
s Eidolon_helvum.KE759718.1                                   8836 32 +     11740 attcctggaag-------ttaggaatcat-------gca-ttattt--------------g
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1089377 30 +  10337057 ATTCTTAGAAG-------GCA--AATCAT-------GTG-TTATTT--------------G
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          17460 16 -    110024 ATTTCTGAATA-------GTAAG--------------------------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01109367.1                            3513 16 -      6299 ATTTCTGAATA-------GTAAG--------------------------------------
i Ellobius_talpinus.LOJH01109367.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16327633 22 -  41312741 attcctggaag-------gtaggaatcat--------------------------------
i Enhydra_lutris.KZ291758.1                              C 0 I 8
s Equus_asinus.JREZ01000139.1                              1281643 24 +   4378816 attcctggaag-------gaaagaatcat-------at-----------------------
i Equus_asinus.JREZ01000139.1                            C 0 I 8
s Equus_caballus.CM000403.2                               18529464 24 -  39960074 attcctggaag-------gaaagaatcat-------at-----------------------
i Equus_caballus.CM000403.2                              C 0 I 8
s Equus_przewalskii.KK951119.1                               31479 24 +    498745 attcctggaag-------gaaagaatcat-------at-----------------------
i Equus_przewalskii.KK951119.1                           C 0 I 8
s Erythrocebus_patas.Contig38                             21202461 32 -  21539334 ATTCCCAGAAG-------GCAGGAATCAG-------GTG-TTATCT--------------G
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              11681 32 -     14127 ATTCCTGGAAG-------GCACGAATCAG-------GTG-TGATTT--------------G
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                4379 32 -     16928 ATTCCTGGAAG-------GCACGAATCAG-------GTG-TGATTT--------------G
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              13416 32 -     25546 ATTCCTGGAAG-------GCACGAATCAG-------GTG-TGATTT--------------G
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            10606 32 +     26330 ATTCCTGGAAG-------GCACGAATCAG-------GTG-TGATTT--------------G
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 11845 32 +     23973 ATTCCTGGAAG-------GCACGAATCAG-------GTG-TGATTT--------------G
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                10606 32 +     75513 attcctggaag-------gcacgaatcag-------gtg-tgattt--------------g
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  8548 32 +     97555 attcctggaag-------gcacgaatcag-------gtg-tgattt--------------g
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            11484 32 +     26496 ATTCCTGGAAG-------GCACAAATCAG-------GTG-TGATTT--------------G
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  2081 32 -     17153 attcctggaag-------gcaCAAATCAG-------GTG-TGATTT--------------G
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              11657 32 +    111500 attcctggaag-------gcacgaatcag-------gtg-tgattt--------------g
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20235488 24 + 206538554 attcctgaaag-------gtaggaatcat-------gt-----------------------
i Felis_catus.CM001381.2                                 C 0 I 8
s Felis_catus_fca126.CM031415.1                           20194331 24 + 205367284 ATTCCTGAAAG-------GTAGGAATCAT-------GT-----------------------
i Felis_catus_fca126.CM031415.1                          C 0 I 8
s Felis_nigripes.FelNig_flattened_line_20823                  7845 24 -     36744 ATTCCTGAAAG-------GTAGGAATCAT-------GT-----------------------
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 8
s Galago_moholi.ctg2040                                     424215 32 -    453645 attcctggaag-------gcagaagtcag-------gtg-tgattt--------------a
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             1922 32 +     11339 ATTCCTGGAAG-------GCAGAAGTCAG-------GTG-TGATTT--------------A
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1959596                            5729 32 +      6795 ATTCCTGGAAG-------GCAGAGTTCAG-------GTG-TGATTT--------------A
i Galagoides_demidoff.k141_1959596                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_197845               1927 32 -      3123 attcctggaag-------gcaggaatcag-------atg-ttattt--------------g
i Galeopterus_variegatus.GalVar_scaffold_197845          C 0 C 0
s Gorilla_beringei.k141_3596273                              13228 32 -     32273 ATTCCCAGAAG-------GCAGGAATCAC-------ATG-TTATTT--------------G
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186335376 32 + 186649187 attcccagaag-------gcaggaatcac-------atg-ttattt--------------g
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   32397 46 +     78134 ATCCTTGGAAG-------CCAGGCATtat-------gga-ttggatctaaagtgtgcccca
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 22
s Hapalemur_alaotrensis.k141_170648                           4735 32 -     19426 ATTCCTGGAAG-------GCATGAATCAG-------GTG-TGATTT--------------G
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              9884 32 -     15286 ATTCCTGGAAG-------GCATGAATCAG-------GTG-TGATTT--------------G
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             11523 32 +     18253 ATTCCTGGAAG-------GCATGAATCAG-------GTG-TGATTT--------------G
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         11624 32 -     41752 ATTCCTGGAAG-------GCATGAATCAG-------GTG-TGATTT--------------G
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         11462 32 -     16460 ATTCCTGGAAG-------GCATGAATCAG-------GTG-TGATTT--------------G
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               240644 23 +    327341 ATTCCTG-AAC-------ATAGGAATCAT-------GC-----------------------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 8
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 617 32 +       961 actcctggaag-------gcagaaatcat-------gtG-CCATTC--------------A
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       110121 32 +   1711038 attcctggaag-------gtaggaatgat-------gtg-ttattt--------------g
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               41544 32 +     43066 ATTCCTGGAAG-------GTAGGAATGAT-------GTG-TTGTTT--------------G
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    432039 32 +    630532 ATTCCCAGAAG-------GCAGGAATCAC-------ATG-TTATTT--------------G
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  42770 24 +     55795 ATTCCTGGAAG-------TTTGGAAtcat-------gt-----------------------
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 8
s Hylobates_agilis.k141_307679                               14976 32 -     15490 ATTCCCAGAAG-------GCAGGAATCAC-------ATG-TTATTT--------------G
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              56982 32 +     67168 ATTCCCAGAAG-------GCAGGAATCAC-------ATG-TTATTT--------------G
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189540632 32 - 191637585 ATTCCCAGAAG-------GCAGGAATCAC-------ATG-TTATTT--------------G
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3333526 32 -  11177569 ATTCCCAGAAG-------GCAGGAATCAC-------ATG-TTATTT--------------G
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7517597 46 -   7955117 attcttagaaa-------gtagatgtcat-------ggt-ttgggaataaagtgtccccta
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 392
s Indri_indri.k141_3655594                                   20429 32 +     31101 attcctggaag-------gcaggaaTCAG-------GTG-TGATTT--------------G
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15521986 32 -  30322482 attcctggaag-------gcatgaatcag-------gtg-tgattt--------------g
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        4978 32 +     64341 ATTCCCGGTAG-------GCAGGAATCAG-------GTG-TTATTT--------------A
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           2038 32 +      4941 ATTCCCGGTAG-------GCAGGAATCAG-------GTG-TTATTT--------------A
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4906 32 +     35603 ATTCCTGGTAG-------GCAGGAATCAG-------GTG-TTATTT--------------A
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    26377 32 +     38576 ATTCCCAGTAG-------GCAGGAATCAG-------GTG-TTATTT--------------A
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         23074 32 +     66356 ATTCCCAGTAG-------GCAGGAATCAG-------GTG-TTATTT--------------A
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          8867 32 -     23766 ATTTCTGGAAG-------GCAGGAATCAG-------GTG-TGATTT--------------G
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             26814 32 +     45836 ATTTCTGGAAG-------GCAGGAATCAG-------GTG-TGATTT--------------G
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_320948                          1038 32 -      1719 attcctggaag-------gcaggaatcag-------gtg-tgattt--------------a
i Lepilemur_ruficaudatus.k141_320948                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      24869 32 +     54090 ATTTCTGGAAG-------GCAGGAATCAG-------GTG-TGATTT--------------G
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.APMU01168965.1                       411 24 -      1094 attcctggaag-------atacgaatcat-------gt-----------------------
i Leptonychotes_weddellii.APMU01168965.1                 C 0 I 8
s Lepus_americanus.LepAme_scaffold_107385                     3867 32 -     14121 ATTTCTGGAAA-------ATAGGAAACAT-------GTC-TCATTT--------------G
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1434398 32 +   1826925 AATCCCAGAAG-------GCAGGAATCAG-------GTG-TTATTT--------------G
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            3671 32 +     11245 ATTCTTAGAAG-------GCAGAAATTAG-------GTG-TGATTT--------------A
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1002509 32 +   6120653 ATTCTTAGAAG-------GCAGAAATTAG-------GTG-TGATTT--------------A
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214902 32 -  43346337 attcctggaag-------acagaaatcat-------gtg-ctattt--------------g
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17953569 24 -  59628241 attcctagaag-------gtacaaatcat-------gt-----------------------
i Lycaon_pictus.CM007581.1                               C 0 I 8
s Macaca_arctoides.k141_2326796                               4211 32 +     40492 AATCCCAGAAG-------GCAGGAATCAG-------GTG-TTATTT--------------G
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59673473 32 +  60120075 AATCCCAGAAG-------GCAGGAATCAG-------GTG-TTATTT--------------G
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  9967 32 -     26193 AATCCCAGAAG-------GCAGGAATCAG-------GTG-TTATTT--------------G
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            77771 32 -    114318 AATCCCAGAAG-------GCAGGAATCAG-------GTG-TTATTT--------------G
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  3470 32 -     23192 AATCCCAGAAG-------GCAGGAATCAG-------GTG-TTATTT--------------G
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                12930 32 -     29190 AATCCCAGAAG-------GCAGGAATCAG-------GTG-TTATTT--------------G
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  21498 32 +     37952 AATCCCAGAAG-------GCAGGAATCAG-------GTG-TTATTT--------------G
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186836586 32 + 187317192 AATCCCAGAAG-------GCAGGAATCAG-------GTG-TTATTT--------------G
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25455149 32 -  25927173 AATCCCAGAAG-------GCAGGAATCAG-------GTG-TTATTT--------------G
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  77347 32 +     89720 AATCCCAGAAG-------GCAGGAATCAG-------GTG-TTATTT--------------G
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 4344 32 +     20474 AATCCCAGAAG-------GCAGGAATCAG-------GTG-TTATTT--------------G
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   4146 32 -     14993 AATCCCAGAAG-------GCAGGAATCAG-------GTG-TTATTT--------------G
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  327016 32 -    668171 AATCCCAGAAG-------GCAGGAATCAG-------GTG-TTATTT--------------G
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 2456 32 -     24072 AATCCCAGAAG-------GCAGGAATCAG-------GTG-TTATTT--------------G
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               23085 32 -     45290 AATCCCAGAAG-------GCAGGAATCAG-------GTG-TTATTT--------------G
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88910 32 +     94391 ATTCCCAGAAG-------GTAGGAATCAT-------GCA-TAATTT--------------G
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23934672 32 -  24302211 AATCCCAGAAG-------GCAGGAATCAG-------GTG-TTATCT--------------G
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               348805 32 +    752769 AATCCCAGAAG-------GCAGGAATCAG-------GTG-TTATCT--------------G
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              17764 22 +    737560 --tcttggaag-------gtaggaattgt-------gt-----------------------
i Manis_javanica.JSZB01003497.1                          C 0 I 7
s Manis_pentadactyla.KN006162.1                              49150 22 -    317179 --tcttggaag-------gtaggaattgt-------gt-----------------------
i Manis_pentadactyla.KN006162.1                          C 0 I 7
s Marmota_marmota.CZRN01000018.1                          33099908 46 -  40650429 attcctagaaa-------gtagAtgtcat-------ggt-ttgggaataaagtgtccccta
i Marmota_marmota.CZRN01000018.1                         C 0 I 389
s Megaderma_lyra.MegLyr_scaffold_4542                         8658 31 -    207569 at-cctggaag-------gtgggaatcgt-------gtg-ttattt--------------g
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              8350 24 +     13704 attcctggaag-------gtaggaatcct-------gt-----------------------
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 8
s Meriones_unguiculatus.MerUng_scaffold_7390                 30536 16 +    140813 ATTTCTTAATG-------GCATG--------------------------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12180331 16 -  29670104 ATTTCCTAATG-------GCAAT--------------------------------------
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                3160 31 -      7380 ATTCCAGGTAC-------GCAGGAATCAC-------G-G-TTATTT--------------A
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               2226 31 +     18990 ATTCCAGGTAC-------GCAGGAATCAC-------G-G-TTATTT--------------A
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      3165 31 -      7356 ATTCCAGGTAC-------GCAGGAATCAC-------G-G-TTATTT--------------A
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18289373 32 -  93316391 ATTTCTGGAAG-------GCAGGAATCAG-------GTG-TGATTT--------------G
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    17477 19 -    145209 ---------------------GGATTCCT-------GTAAGTATTT--------------A
i Microgale_talazaci.MicTal_scaffold_6613                I 560 C 0
s Microtus_ochrogaster.CM001695.1                         11257970 16 -  27267610 ATTTCTGAATA-------GCAAG--------------------------------------
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miopithecus_ogouensis.k141_534055                           6392 32 -     28506 AATCCCAGAAG-------GCAGGAATCAG-------GTG-TTATTT--------------G
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         3825 24 -      8324 attcctggaag-------atacgaatcat-------gt-----------------------
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 8
s Mirza_zaza.k141_952172                                      6946 32 -     37649 atttctggaag-------gcaggaatcag-------gtg-tgattt--------------g
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 139606 30 -    366855 ATTCCTAGAAG-------GTAGGAATCACGCATTGTG------------------------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 2
s Mungos_mungo.MunMun_flattened_line_23663                   33751 23 +     37127 ATTCCTG-AAG-------GTAGGAATCAT-------GT-----------------------
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 8
s Mus_caroli.LT608237.1                                   84358940 16 - 120012414 AATTCTTAATG-------GCAAG--------------------------------------
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87647929 16 - 129401213 AATTCTTAATG-------GCAAG--------------------------------------
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31352597 16 -  89631738 AATTCTTAATG-------ACAAG--------------------------------------
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90750007 16 - 130317789 AATTCTTAATG-------GCAAG--------------------------------------
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              4686 46 +     14296 GTCCTTGGAAG-------CCAGGtgttct-------gga-ttagatgtaaagtgttcccca
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 13
s Mustela_putorius.JH418006.1                               299531 22 -  14710649 attcctgtaag-------gtaggaatcat--------------------------------
i Mustela_putorius.JH418006.1                            C 0 I 8
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187087 32 +    196477 aatgttacaag-------gcaggcatcac-------atg-ttgttt--------------g
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nasalis_larvatus.k141_413338                               12388 32 +     21681 ATTCGCAGAAG-------GAAGGAATTAG-------GTG-TTATTT--------------G
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9147827 24 -   9404916 attcctagaag-------gtacaaatcat-------gt-----------------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 8
s Nycticebus_bengalensis.LG01                            102577432 32 - 196305487 attcttggaag-------gcagaaatcag-------gag-tgattt--------------a
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             5118 32 +      8486 attcttggaag-------gcagaaatcag-------gag-tgattt--------------a
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105747859 32 + 199412804 attcttggaag-------gcagaaatcag-------gtg-tgattt--------------a
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1360950 32 +   3988456 attcctggaaa-------ataggagttat-------gtt-ttattt--------------g
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              504975 24 -   2017862 attcctggaag-------atacgaatcat-------gc-----------------------
i Odobenus_rosmarus.KB229312.1                           C 0 I 8
s Ondatra_zibethicus.OndZib_scaffold_46174                   22086 16 +     28053 ATTTCTGAATA-------GAAAG--------------------------------------
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    77160 16 +    102263 ATTTATGAGTG-------CCAAG--------------------------------------
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               7440 18 -     18566 ---------------------ggaATCAT-------GTG-TCATTT--------------G
i Orycteropus_afer.OryAfe_flattened_line_144387          I 6 C 0
s Oryctolagus_cuniculus.CM000791.1                        67144712 32 + 174332312 attcctggaaa-------ataggaaacat-------gtc-ttattt--------------g
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       460583 24 -    559221 attcctagaag-------gtacaaatcat-------gt-----------------------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 8
s Otolemur_crassicaudatus.k141_222918                         1757 32 +      8798 ATTCCTGGAAG-------GCCGAAGTCAG-------GTG-TGATTT--------------A
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             693924 32 -   1103335 ATCCCTGGAAG-------GCCAAAGTCAG-------GTG-TGATTT--------------A
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    41327 22 +     80009 ATTCCCAGAAG-------GCAGGAATCAC--------------------------------
i Pan_paniscus.KQ411613.1                                C 0 I 8
s Pan_troglodytes.CM009242.2                             189140237 32 + 189151597 ATTCCCAGAAG-------GCAGGAATCAC-------ATG-TTATTT--------------G
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  149497 24 +    230217 attcctgaaag-------gtaggaatcat-------gt-----------------------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 8
s Panthera_pardus.KV860321.1                                262702 24 +  18783137 attcctgaaag-------gtaggaatcat-------gt-----------------------
i Panthera_pardus.KV860321.1                             C 0 I 8
s Panthera_tigris.KE722367.1                               4719339 24 -   8748460 attcctgaaag-------gtaggaatcat-------gt-----------------------
i Panthera_tigris.KE722367.1                             C 0 I 8
s Papio_anubis.CM001495.2                                183440426 32 + 183742232 AATCCCAGAAG-------GCAGGAATCAG-------GTG-TTATTT--------------G
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             4119 32 +     20448 AATCCCAGAAG-------GCAGAAATCAG-------GTG-TTATTT--------------G
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20560925 32 +  20919399 AATCCCAGAAG-------GCAGGAATCAG-------GTG-TTATTT--------------G
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   2863 32 +     41871 AATCCCAGAAG-------GCAGGAATCAG-------GTG-TTATTT--------------G
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     6149 32 +     27711 AATCCCAGAAG-------GCAGGAATCAG-------GTG-TTATTT--------------G
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  6228 32 +      9205 AATCCCAGAAG-------GCAGGAATCAG-------GTG-TTATTT--------------G
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10960 24 -     78924 attcctgtaag-------gtaggagtcat-------gt-----------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 8
s Perodicticus_ibeanus.k141_855320                            7884 32 +     13100 ATTCCTGGAAG-------GCAGAAATCAG-------GTG-TGATTT--------------A
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             6262 32 +     25941 tttcctggaag-------gcagaaatcag-------gtg-tgattt--------------a
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18191759 16 -  18517816 ATTTATGAGTG-------GCAAG--------------------------------------
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Piliocolobus_badius.k141_1234363                           40896 32 +     62158 ATTCCCAGAAG-------GAAGGAATTAG-------GTG-TTATTT--------------G
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        35625 32 +     89929 ATTCCCAGAAG-------GAAGGAATTAG-------GTG-TTATTT--------------G
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            37041 32 +     51399 ATTCCCAGAAG-------GAAGGAATTAG-------GTG-TTATTT--------------G
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14293279 32 -  14605196 ATtcccagaag-------gaaggaattag-------GTG-TTATTT--------------G
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189128352 32 + 189387572 ATTCCCAGAAG-------GCAGGAATCAC-------ATG-TTATTT--------------G
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9567960 32 +   9816681 ATTCCCAGAAG-------GCAGGAATCAC-------ATG-TTATTT--------------G
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               70551 32 -     81375 ATTCCCAGAAG-------GAAGGAATTAG-------GTG-TTATTT--------------G
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              2371 32 +     19060 ATTCCCAGAAG-------GAAGGAATTAG-------GTG-TTATTT--------------G
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 10366 32 -     22811 actcctagaag-------gcagaaatcat-------gtG-CCATTC--------------A
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2594636 32 -   4620579 ATTCCTGGAAG-------GCATGAATCAG-------GTG-TGATTT--------------G
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     988627 32 +   2598838 ATTCCTGGAAG-------GCAGGAATCAG-------GTG-TGATTT--------------A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          26937 32 +     38485 ATTCCTGGAAG-------GCAGGAATCAG-------GTG-TGATTT--------------A
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             3097 32 +      4256 attcctggaag-------gcaggaatcag-------gtg-tgattt--------------a
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          24457 32 +     35766 ATTCCTGGAAG-------GTAGGAATCAA-------GTG-TGATTT--------------A
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           2640 32 -     24134 ATTCCTGGAAG-------GTAGTAATCAG-------GTG-TGATTT--------------A
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        26454 32 -     67325 attcctggaag-------gcaggaatcag-------gtg-tgattt--------------a
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           2690 32 -      6182 ATTCCTGGAAG-------GCAGGAATCAG-------GTG-TGATTT--------------A
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             8178 16 -     21651 ATTTCTTAATG-------GCATG--------------------------------------
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            12997 30 -     21811 attcctggaag-------gtagggatcatgaattgta------------------------
i Pteronotus_parnellii.KE909381.1                        C 0 I 2
s Pteronura_brasiliensis.PteBra_flattened_line_31117         38543 22 +     42204 attcctggaag-------gtaggaatcat--------------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 8
s Pteropus_alecto.KB030862.1                              22975102 25 +  28871421 -------gaag-------ctaggaatcat-------gca-ttgttt--------------g
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1358191 25 +   4952924 -------gaag-------ctaggaatcat-------gca-ttgttt--------------g
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20272616 24 -  38429054 attcctgaaag-------gtaggaatcat-------gt-----------------------
i Puma_concolor.QAVW01001104.1                           C 0 I 8
s Pygathrix_cinerea.k141_1153803                             12386 32 -     91421 ATTCCCAGAAG-------GAAGGAATTAG-------GTG-TTATTT--------------G
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7606512 32 +   7812017 ATTCCCAGAAG-------GAAGGAATTAG-------GTG-TTATTT--------------G
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             12360 32 -     72585 ATTCCCAGAAG-------GAAGGAATTAG-------GTG-TTATTT--------------G
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53568012 16 +  90668790 AATTCTTAATG-------GCAAG--------------------------------------
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             4067 32 -     11128 ATTCCCAGAAG-------GAAGGAATTAG-------GTG-TTATTT--------------G
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91233422 32 - 195417433 Attcccagaag-------gaaggaattag-------GTG-TTATTT--------------G
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7669071 32 +   7961872 ATTCCCAGAAG-------GAAGGAATTAG-------GTG-TTATTT--------------G
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                86104 32 -     96226 attcctggaag-------gtaggaatcgt-------gaa-ttattt--------------g
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               5286 32 -      8359 ATTCCCGGTAG-------GCAGGTATCAG-------GTG-TTATTT--------------A
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            11594 32 -     13588 ATTCCCGGTAG-------GCAGGAATCAG-------GTG-TTATTT--------------A
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              5232 32 -      6207 ATTCCCAGTAG-------GCAGGAATCAG-------GTG-TTATTT--------------A
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               10959 32 +     13640 ATTCCTGGTAG-------GCAGGAATCAG-------GTG-TTATTT--------------A
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               5822 32 +      8564 ATTCCCAGTAG-------GCAGGAATCAG-------GTG-TTATTT--------------A
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209466099 32 + 209938924 ATTCCCGGTAG-------GCAGGTATCAG-------GTG-TTATTT--------------A
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 5313 32 -      9399 ATTCCCAATAG-------GCAGGAATCAG-------GTG-TTATTT--------------A
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 2459 32 +      3421 ATTCCCGGTAG-------GCAGGAATCAG-------GTG-TTATTT--------------A
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119948637 32 - 121099817 ATTCCCAGCAG-------GCAGGAATCAG-------GTG-TTATTT--------------A
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       21104 32 +     46362 ATTCCCAGCAG-------GCAGGAATCAG-------GTG-TTATTT--------------A
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               21199 32 +     45824 ATTCCCAGCAG-------GCAGGAATCAG-------GTG-TTATTT--------------A
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             37814 32 -     64574 ATTCCCAGCAG-------GCAGGAATCAG-------GTG-TTATTT--------------A
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                                820 32 -     23631 ATTCCCAGCAG-------GCAGGAATCAG-------GTG-TTATTT--------------A
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 21092 32 -     61129 ATTCCCAGCAG-------GCAGGAATCAG-------GTG-TTATTT--------------A
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          16894 32 -     19888 ATTCCCAGAAG-------GAAGGAATTAG-------GTG-TTATTT--------------G
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      24097 32 +     39453 ATTCCCAGAAG-------GAAGGAATTAG-------GTG-TTATTT--------------G
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            4623 32 +     27826 ATTCCCAGAAG-------GAAGGAATTAG-------GTG-TTATTT--------------G
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             4143 32 -     19483 ATTCCCAGAAG-------GAAGGAATTAG-------GTG-TTATTT--------------G
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      4205 32 +      7198 ATTCCCAGAAG-------GAAGGAATTAG-------GTG-TTATTT--------------G
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         12465 32 +     15514 ATTCCCAGAAG-------GAAGGAATTAG-------GTG-TTATTT--------------G
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11165 16 -     12148 ATTTCTGAATG-------ACAAG--------------------------------------
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               2126 23 +   1910179 attcctggaa--------gttggaatcat-------gt-----------------------
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 8
s Spermophilus_dauricus.KZ294078.1                         1950681 46 -   3870691 attcctagaaa-------gtagAtgtcat-------ggt-ttggaaataaagtgtccccta
i Spermophilus_dauricus.KZ294078.1                       C 0 I 504
s Spilogale_gracilis.SpiGra_flattened_line_13525             29058 24 +     97271 attcctggaag-------gtaggaatcat-------gt-----------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 8
s Suricata_suricatta.SurSur_flattened_line_6629              16645 23 -    196729 attcctg-aac-------gtaggaatcat-------gc-----------------------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 8
s Sus_scrofa.JH118708.1                                      33840 24 -     47482 attcctggaag-------ttagaaatcat-------tt-----------------------
i Sus_scrofa.JH118708.1                                  C 0 I 1
s Symphalangus_syndactylus.tarseq_199                      1090674 32 -   1523678 ATTCCCAGAAG-------GCAGGAATCAC-------ATG-TTATTT--------------G
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 8938 32 +     41958 atccctggaag-------ggaggaatcat-------gtg-ttagtt--------------g
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 70441 32 +    116680 aatgctgcaag-------gcaggcatcac-------atg-ttgttT--------------G
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      117060 24 -    156842 attcctggaag-------gtaagaatcat-------at-----------------------
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 8
s Tapirus_terrestris.TapTer_scaffold_755                    385513 24 +    539355 attcctggaag-------gtaagaatcat-------at-----------------------
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 8
s Tarsius_lariang.k141_2201908                               24001 32 +     70052 attcctggaag-------gcaagaatcag-------atg-ttattt--------------g
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_2029956                               3346 32 +      4644 attcctagaag-------gcaagaatcag-------atg-ttattt--------------g
i Tarsius_wallacei.k141_2029956                          C 0 C 0
s Theropithecus_gelada.CM009954.1                        186425791 32 + 186847797 AATCCCAGAAG-------GCAGGAATCAG-------GTG-TTATTT--------------G
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   3006 32 +      8208 attgctgcaag-------gcaggaaactt-------gta-ttgttt--------------g
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Trachypithecus_auratus.k141_722599                          8196 32 -     20410 ATTCCCAGAAG-------GAAGGAATTAG-------GTG-TTATTT--------------G
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    12390 32 +     15221 ATTCCCAGAAG-------GAAGGAATTAG-------GTG-TTATTT--------------G
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        8297 32 +     19930 ATTCCCAGAAG-------GAAGGAATTAG-------GTG-TTATTT--------------G
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       4726 32 -     19997 ATTCCCAGAAG-------GAAGGAATTAG-------GTG-TTATTT--------------G
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            44846 32 -     60166 ATTCCCAGAAG-------GAAGGAATTAG-------GTG-TTATTT--------------G
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        12318 32 -     27529 ATTCCCAGAAG-------GAAGGAATTAG-------GTG-TTATTT--------------G
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     12260 32 -     18194 ATTCCCAGAAG-------GAAGGAATTAG-------GTG-TTATTT--------------G
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           5993 32 -     21137 ATTCCCAGAAG-------GAAGGAATTAG-------GTG-TTATTT--------------G
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    4696 32 -     10723 ATTCCCAGAAG-------GAAGGAATTAG-------GTG-TTATTT--------------G
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         3848 32 +      9834 ATTCCCAGAAG-------GAAGGAATTAG-------GTG-TTATTT--------------G
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        22164 32 +     32220 ATTCCCAGAAG-------GAAGGAATTAG-------GTG-TTATTT--------------G
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5936263 32 +   6242583 ATTCCCAGAAG-------GAAGGAATTAG-------GTG-TTATTT--------------G
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        5511 32 +     20839 ATTCCCAGAAG-------GAAGGAATTAG-------GTG-TTATTT--------------G
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2152750 32 +   4065304 GTCCCTGGAAG-------GCCAGAATCAA-------CAG-TTATTT--------------G
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     6365 32 -     10553 GTCCCTGGAAG-------GCCAGAATCAA-------TGG-TTATTT--------------G
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4848752 24 -   5085361 attcctagaag-------gtatgaatcat-------gt-----------------------
i Ursus_maritimus.KK499267.1                             C 0 I 8
s Varecia_rubra.k141_590885                                   9319 32 +     50397 attcctggaag-------gcaggaatcag-------gtg-tgattt--------------g
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              9373 32 +     24756 attcctggaag-------gcaggaatcag-------gtg-tgattt--------------g
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5370219 24 -   5488506 atccccagaac-------gtaggaatcat-------gt-----------------------
i Vicugna_pacos.KN270157.1                               C 0 I 8
s Vulpes_lagopus.VulLag_flattened_line_30954                  9237 24 -     43706 attcctagaag-------gtacaaatcat-------gt-----------------------
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 8
s Xerus_inauris.XerIna_scaffold_48378                        22054 46 -     24430 ATTCCTAGAAA-------GTAGAtgtcat-------ggt-ttggaaatgaagtgtccccta
i Xerus_inauris.XerIna_scaffold_48378                    C 0 I 377
s Zalophus_californianus.ZalCal_flattened_line_17732          3469 24 +     86975 attcctggaag-------atacgaatcat-------gt-----------------------
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 8
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519  0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188  0 +      1777 C
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9947 50 -     10935 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383  9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Crocidura_indochinensis.CroInd_scaffold_287352              1624  0 +      4208 I
e Condylura_cristata.JH655891.1                           17547132  5 -  53390261 I
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       4007  8 +     62944 TATTTGT------------------C
s Acinonyx_jubatus.LLWD01001279.1                           825649  8 -   1699592 aatttgc------------------c
i Acinonyx_jubatus.LLWD01001279.1                        I 8 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9508906  8 -  29979442 catttgc------------------c
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 8 C 0
s Ailurus_fulgens.LNAC01001112.1                             77695  8 -    347723 tatttgt------------------c
i Ailurus_fulgens.LNAC01001112.1                         I 8 C 0
s Allenopithecus_nigroviridis.k141_3361533                   11926  8 -     52922 TATTTGT------------------C
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         11860  8 -     28001 TATTTGT------------------C
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          2306  8 -     18505 TATTTGT------------------C
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           3155  8 -     12518 TATTTGT------------------C
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                               759  8 -     27731 TATTTGT------------------C
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                 882  8 +      3134 TATTTGT------------------C
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               1020  8 -     45847 TATTTGT------------------C
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                22224  8 +     25266 TATTTGT------------------C
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           1408  8 +      2906 TATTTGT------------------C
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            15521  8 -     18578 TATTTGT------------------C
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                               908  8 +     47717 TATTTGT------------------C
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             1039  8 -      3544 TATTTGT------------------C
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             12258  8 +     50774 TATTTGT------------------C
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  12881  8 -     33861 TATTTGT------------------C
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            12902  8 -     34016 TATTTGT------------------C
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4295298  8 -   5030052 TATTTGT------------------C
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             12903  8 -     34685 TATTTGT------------------C
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               26024  8 -     47192 TATTTGT------------------C
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       9893  8 +     20879 TATGTGT------------------T
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 316 C 0
s Arctocebus_calabarensis.k141_2318572                        9275  8 +     14667 TATTTAT------------------C
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Avahi_laniger.k141_765380                                  51605  8 -     92717 tatttgt------------------c
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              52234  8 +     85213 TATTTGT------------------C
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             2645  8 -     10423 TAGCTGT------------------C
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             22145  8 +     31915 GATCTGT------------------C
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            2615  8 +      5267 TAGCTGT------------------C
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23587829  8 - 189096842 TAGCTGT------------------C
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              9359  8 -     12001 TAGCTGT------------------C
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10000751  8 -  17673402 tatttga------------------c
i Camelus_bactrianus.KN276810.1                          I 8 C 0
s Camelus_dromedarius.KN272107.1                           2333215  8 -   7040546 tatttga------------------c
i Camelus_dromedarius.KN272107.1                         I 8 C 0
s Camelus_ferus.KB017975.1                                  401491  8 -   1652518 tatttga------------------c
i Camelus_ferus.KB017975.1                               I 8 C 0
s CanFam4.chr16                                           17797653  8 -  60362399 catttgc------------------c
i CanFam4.chr16                                          I 8 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    183710  8 -    185531 catttgc------------------c
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 8 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9033096  8 -   9314153 catttgc------------------c
i Canis_lupus_dingo.QKWQ01000480.1                       I 8 C 0
s Canis_lupus_familiaris.chr16                            17957361  8 -  59632846 catttgc------------------c
i Canis_lupus_familiaris.chr16                           I 8 C 0
s Canis_lupus_orion.HG994398.1                            18498699  8 +  63665305 catttgc------------------c
i Canis_lupus_orion.HG994398.1                           I 8 C 0
s Carlito_syrichta.NW_007259797.1                           153911  8 -    496798 TATTTGT------------------C
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    136014  8 +    179628 tatttgt------------------C
i Castor_canadensis.CasCan_scaffold_2074                 I 1 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     91331  8 +    217609 TATTTGC------------------C
i Catagonus_wagneri.CatWag_scaffold_2839                 I 1 C 0
s Cebuella_niveiventris.k141_1251222                          7269  8 -     11392 TAGCTGT------------------C
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               3367  8 -      7577 TAGCTGT------------------C
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         3422  8 +     31688 tatttgt------------------C
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12229768  8 +  27778364 tatttgc------------------c
i Ceratotherium_simum.JH767749.1                         I 8 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634            795  8 -     25243 tatttgc------------------c
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 8 C 0
s Cercocebus_atys.KQ010504.1                               4472885  8 +   4669795 TATTTGT------------------C
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        11432  8 -     19203 TATTTGT------------------C
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           5854  8 +      8260 TATTTGT------------------C
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           6081  8 +     27781 TATTTGT------------------C
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         6237  8 -     20310 TATTTGT------------------C
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           9216  8 +     29689 TATTTGT------------------C
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            3646  8 +      9989 TATTTGT------------------C
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          11895  8 -     27936 TATTTGT------------------C
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                             770  8 -     17152 TATTTGT------------------C
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38814300  8 +  39242232 TATTTGT------------------C
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21219999  8 -  21565898 TATTTGT------------------C
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       37118  8 -     53127 TATTTGT------------------C
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        4399  8 +      7159 TATTTGT------------------C
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       11921  8 -     27947 TATTTGT------------------C
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         11894  8 +     17596 TATTTGT------------------C
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          1117  8 +     26000 TATTTGT------------------C
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            5851  8 -      6351 TATTTGC------------------C
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             19021  8 -     52598 TATTTGT------------------C
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           14366  8 +     57038 TATTTGT------------------C
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           8293  8 +     11226 TATCTGT------------------C
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18425857  8 -  18827391 TATTTGT------------------C
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       12295  8 -     50209 TATTTGT------------------C
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135419303  8 + 135778131 TATTTGT------------------C
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 16196  8 +     19366 tatttgc------------------c
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            171295  8 +    839153 tatttgc------------------c
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1907819  8 +   2368649 TATTTGT------------------C
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199947491  8 + 200372422 TATTTGT------------------C
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              34362  8 +     84244 TATTTGT------------------C
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          12348  8 -     20389 tatttgt------------------c
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             26826  8 -     87169 catttgc------------------c
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 8 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    835085  8 +   1526836 tatcttt------------------c
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 1 C 0
s Dasypus_novemcinctus.JH564415.1                            62178  8 +   2246927 tatttgc------------------c
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12535224  8 -  12879189 tatttgt------------------c
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  671620  8 +   1390856 tatttgc------------------c
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 8 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    4376  8 +    198055 tatttgc------------------c
i Diceros_bicornis.DicBicMic_scaffold_5955               I 8 C 0
s Eidolon_helvum.KE759718.1                                   8868  8 +     11740 tatttgt------------------c
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1089407  8 +  10337057 TTTTGAG------------------T
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16327663  8 -  41312741 cacttga------------------c
i Enhydra_lutris.KZ291758.1                              I 8 C 0
s Equus_asinus.JREZ01000139.1                              1281675  8 +   4378816 tatttgc------------------c
i Equus_asinus.JREZ01000139.1                            I 8 C 0
s Equus_caballus.CM000403.2                               18529496  8 -  39960074 tatttgc------------------c
i Equus_caballus.CM000403.2                              I 8 C 0
s Equus_przewalskii.KK951119.1                               31511  8 +    498745 tatttgc------------------c
i Equus_przewalskii.KK951119.1                           I 8 C 0
s Erythrocebus_patas.Contig38                             21202493  8 -  21539334 TATTTGT------------------C
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              11713  8 -     14127 TATTTGT------------------C
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                4411  8 -     16928 TATCTGT------------------C
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              13448  8 -     25546 TATTTGT------------------C
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            10638  8 +     26330 TATTTGT------------------C
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 11877  8 +     23973 TATTTGT------------------C
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                10638  8 +     75513 tATTTGT------------------C
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  8580  8 +     97555 tATTTGT------------------C
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            11516  8 +     26496 TATTTGT------------------C
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  2113  8 -     17153 TATTTGT------------------C
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              11689  8 +    111500 tATTTGT------------------C
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20235520  8 + 206538554 catttgc------------------c
i Felis_catus.CM001381.2                                 I 8 C 0
s Felis_catus_fca126.CM031415.1                           20194363  8 + 205367284 CATTTGC------------------C
i Felis_catus_fca126.CM031415.1                          I 8 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  7877  8 -     36744 CATTTGC------------------C
i Felis_nigripes.FelNig_flattened_line_20823             I 8 C 0
s Galago_moholi.ctg2040                                     424247  8 -    453645 tacttat------------------c
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             1954  8 +     11339 TACTTAT------------------C
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1959596                            5761  8 +      6795 TACTTAT------------------C
i Galagoides_demidoff.k141_1959596                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_197845               1959 26 -      3123 tatttttacaaatacaatgtattttt
i Galeopterus_variegatus.GalVar_scaffold_197845          C 0 C 0
s Gorilla_beringei.k141_3596273                              13260  8 -     32273 TATTTGT------------------C
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186335408  8 + 186649187 tatttgt------------------c
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   32465  4 +     78134 ----ggt------------------c
i Graphiurus_murinus.GraMur_scaffold_10447               I 22 I 218
s Hapalemur_alaotrensis.k141_170648                           4767  8 -     19426 TATTTGT------------------C
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              9916  8 -     15286 TATTTGT------------------C
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             11555  8 +     18253 TATTTGT------------------C
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         11656  8 -     41752 TATTTGT------------------C
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         11494  8 -     16460 TATTTGT------------------C
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               240675  8 +    327341 CATTTGT------------------C
i Helogale_parvula.HelPar_flattened_line_2585            I 8 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 649  8 +       961 TATTTGC------------------T
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       110153  8 +   1711038 tgtttgt------------------c
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               41576  8 +     43066 TGTTTGT------------------C
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    432071  8 +    630532 TATTTGT------------------C
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  42802  8 +     55795 catttgc------------------c
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 8 C 0
s Hylobates_agilis.k141_307679                               15008  8 -     15490 TATTTGT------------------C
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              57014  8 +     67168 TATTTGT------------------C
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189540664  8 - 191637585 TATTTGT------------------C
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3333558  8 -  11177569 TATTTGT------------------C
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7518035  8 -   7955117 catttgt------------------c
i Ictidomys_tridecemlineatus.JH393364.1                  I 392 C 0
s Indri_indri.k141_3655594                                   20461  8 +     31101 TATTTGT------------------C
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15522018  8 -  30322482 tATTTGT------------------C
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        5010  8 +     64341 TATCTGT------------------C
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           2070  8 +      4941 TATCTGT------------------C
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4938  8 +     35603 TATCTGT------------------C
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    26409  8 +     38576 TATCTGT------------------C
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         23106  8 +     66356 TATCTGT------------------C
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          8899  8 -     23766 TATTTGT------------------C
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             26846  8 +     45836 TATTTGT------------------C
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_320948                          1070  8 -      1719 tATTTGT------------------C
i Lepilemur_ruficaudatus.k141_320948                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      24901  8 +     54090 TATTTGT------------------C
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.APMU01168965.1                       443  8 -      1094 catttgc------------------c
i Leptonychotes_weddellii.APMU01168965.1                 I 8 C 0
s Lepus_americanus.LepAme_scaffold_107385                     3899  8 -     14121 TATTTAT------------------C
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1434430  8 +   1826925 TATTTGT------------------C
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            3703  8 +     11245 TATTTAT------------------C
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1002541  8 +   6120653 TATTTAT------------------C
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214934  8 -  43346337 tatttgc------------------t
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17953601  8 -  59628241 catttgc------------------c
i Lycaon_pictus.CM007581.1                               I 8 C 0
s Macaca_arctoides.k141_2326796                               4243  8 +     40492 TATTTGT------------------C
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59673505  8 +  60120075 TATTTGT------------------C
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                  9999  8 -     26193 TATTTGT------------------C
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            77803  8 -    114318 TATTTGT------------------C
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  3502  8 -     23192 TATTTGT------------------C
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                12962  8 -     29190 TATTTGT------------------C
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  21530  8 +     37952 TATTTGT------------------C
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186836618  8 + 187317192 TATTTGT------------------C
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25455181  8 -  25927173 TATTTGT------------------C
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  77379  8 +     89720 TATTTGT------------------C
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 4376  8 +     20474 TATTTGT------------------C
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   4178  8 -     14993 TATTTGT------------------C
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  327048  8 -    668171 TATTTGT------------------C
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 2488  8 -     24072 TATTTGT------------------C
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               23117  8 -     45290 TATTTGT------------------C
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88942  8 +     94391 TATTTGT------------------C
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23934704  8 -  24302211 TATTTGT------------------C
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               348837  8 +    752769 TATTTGT------------------C
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              17793  8 +    737560 tatttac------------------c
i Manis_javanica.JSZB01003497.1                          I 7 C 0
s Manis_pentadactyla.KN006162.1                              49179  8 -    317179 tatttac------------------c
i Manis_pentadactyla.KN006162.1                          I 7 C 0
s Marmota_marmota.CZRN01000018.1                          33100343  8 -  40650429 catttgt------------------c
i Marmota_marmota.CZRN01000018.1                         I 389 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         8689  8 -    207569 tatttgt------------------a
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              8382  8 +     13704 cacttga------------------c
i Mellivora_capensis.MelCap_flattened_line_69365         I 8 C 0
s Mico_argentatus.k141_1239457                                3191  8 -      7380 TAGCTGT------------------C
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               2257  8 +     18990 TAGCTGT------------------C
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      3196  8 -      7356 TAGCTGT------------------C
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18289405  8 -  93316391 TATTTGT------------------C
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    17496  8 -    145209 TATTTGC------------------T
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Miopithecus_ogouensis.k141_534055                           6424  8 -     28506 TATTTGT------------------C
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         3857  8 -      8324 catttgc------------------c
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 8 C 0
s Mirza_zaza.k141_952172                                      6978  8 -     37649 tatttgt------------------c
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 139638  8 -    366855 TATTTGC------------------C
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 2 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   33782  8 +     37127 CATTTGC------------------C
i Mungos_mungo.MunMun_flattened_line_23663               I 8 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              4745  4 +     14296 ----ggt------------------c
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 13 I 286
s Mustela_putorius.JH418006.1                               299561  8 -  14710649 cacttga------------------c
i Mustela_putorius.JH418006.1                            I 8 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187119  8 +    196477 tacctgc------------------c
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nasalis_larvatus.k141_413338                               12420  8 +     21681 TATTTGT------------------C
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9147859  8 -   9404916 catttgc------------------c
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 8 C 0
s Nycticebus_bengalensis.LG01                            102577464  8 - 196305487 tatttat------------------C
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             5150  8 +      8486 tatttat------------------C
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105747891  8 + 199412804 tatttat------------------C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1360982  8 +   3988456 catatat------------------c
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              505007  8 -   2017862 aatttgc------------------c
i Odobenus_rosmarus.KB229312.1                           I 8 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               7458  8 -     18566 TTTTTGC------------------T
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67144744  8 + 174332312 tatttat------------------C
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       460615  8 -    559221 catttgc------------------c
i Otocyon_megalotis.JAEUCK010005147.1                    I 8 C 0
s Otolemur_crassicaudatus.k141_222918                         1789  8 +      8798 TACTTAT------------------C
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             693956  8 -   1103335 TACTTAT------------------C
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    41357  8 +     80009 TATTTGT------------------C
i Pan_paniscus.KQ411613.1                                I 8 C 0
s Pan_troglodytes.CM009242.2                             189140269  8 + 189151597 TATTTGT------------------C
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  149529  8 +    230217 catttgc------------------c
i Panthera_onca.PanOnc_flattened_line_3271               I 8 C 0
s Panthera_pardus.KV860321.1                                262734  8 +  18783137 catttgc------------------c
i Panthera_pardus.KV860321.1                             I 8 C 0
s Panthera_tigris.KE722367.1                               4719371  8 -   8748460 catttgc------------------c
i Panthera_tigris.KE722367.1                             I 8 C 0
s Papio_anubis.CM001495.2                                183440458  8 + 183742232 TATTTGT------------------C
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             4151  8 +     20448 TATTTGT------------------C
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20560957  8 +  20919399 TATTTGT------------------C
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   2895  8 +     41871 TATTTGT------------------C
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     6181  8 +     27711 TATTTGT------------------C
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  6260  8 +      9205 TATTTGT------------------C
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10992  8 -     78924 catttgc------------------c
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 8 C 0
s Perodicticus_ibeanus.k141_855320                            7916  8 +     13100 TATTTAT------------------T
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             6294  8 +     25941 tatttat------------------c
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Piliocolobus_badius.k141_1234363                           40928  8 +     62158 TATTTGT------------------C
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        35657  8 +     89929 TATTTGT------------------C
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            37073  8 +     51399 TATTTGT------------------C
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14293311  8 -  14605196 TATTTGT------------------C
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189128384  8 + 189387572 TATTTGT------------------C
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9567992  8 +   9816681 TATTTGT------------------C
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               70583  8 -     81375 TATTTGT------------------C
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              2403  8 +     19060 TATTTGT------------------C
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 10398  8 -     22811 TATTTGC------------------T
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2594668  8 -   4620579 TATTAGT------------------C
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     988659  8 +   2598838 TATTTGT------------------C
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          26969  8 +     38485 TATTTGT------------------C
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             3129  8 +      4256 tatttgt------------------c
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          24489  8 +     35766 TATTTGT------------------C
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           2672  8 -     24134 TATTTGT------------------C
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        26486  8 -     67325 tatttgt------------------c
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           2722  8 -      6182 TATTTGT------------------C
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            13029  8 -     21811 tatttgc------------------c
i Pteronotus_parnellii.KE909381.1                        I 2 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         38573  8 +     42204 cactcga------------------c
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 8 C 0
s Pteropus_alecto.KB030862.1                              22975127  8 +  28871421 tatttgt------------------c
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1358216  8 +   4952924 tatttgt------------------c
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20272648  8 -  38429054 aatttgc------------------c
i Puma_concolor.QAVW01001104.1                           I 8 C 0
s Pygathrix_cinerea.k141_1153803                             12418  8 -     91421 TATTTGT------------------C
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7606544  8 +   7812017 TATTTGT------------------C
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             12392  8 -     72585 TATTTGT------------------C
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             4099  8 -     11128 TATTTGT------------------C
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91233454  8 - 195417433 TATTTGT------------------C
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7669103  8 +   7961872 TATTTGT------------------C
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                86136  8 -     96226 tatttgt------------------c
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               5318  8 -      8359 TATCTGT------------------C
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            11626  8 -     13588 TATCTGT------------------C
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              5264  8 -      6207 TATCTGT------------------C
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               10991  8 +     13640 TATCTGT------------------C
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               5854  8 +      8564 TATCTGT------------------C
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209466131  8 + 209938924 TATCTGT------------------C
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 5345  8 -      9399 TATCTGT------------------C
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 2491  8 +      3421 TATCTGT------------------C
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119948669  8 - 121099817 TATTTGC------------------C
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       21136  8 +     46362 TATTTGC------------------C
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               21231  8 +     45824 TATTTGC------------------C
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             37846  8 -     64574 TATTTGC------------------C
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                                852  8 -     23631 TATTTGC------------------C
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 21124  8 -     61129 TATTTGC------------------C
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          16926  8 -     19888 TATTTGT------------------C
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      24129  8 +     39453 TATTTGT------------------C
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            4655  8 +     27826 TATTTGT------------------C
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             4175  8 -     19483 TATTTGT------------------C
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      4237  8 +      7198 TATTTGT------------------C
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         12497  8 +     15514 TATTTGT------------------C
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               2157  8 +   1910179 tacttga------------------c
i Solenodon_paradoxus.SolPar_flattened_line_126          I 8 C 0
s Spermophilus_dauricus.KZ294078.1                         1951231  8 -   3870691 CATTTGT------------------C
i Spermophilus_dauricus.KZ294078.1                       I 504 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             29090  8 +     97271 catttga------------------c
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 8 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              16676  8 -    196729 catttgc------------------c
i Suricata_suricatta.SurSur_flattened_line_6629          I 8 C 0
s Sus_scrofa.JH118708.1                                      33865  8 -     47482 tatttgc------------------c
i Sus_scrofa.JH118708.1                                  I 1 C 0
s Symphalangus_syndactylus.tarseq_199                      1090706  8 -   1523678 TATTTGT------------------C
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 8970  8 +     41958 tattcgc------------------c
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 70473  8 +    116680 TACCTGC------------------C
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      117092  8 -    156842 tatttgc------------------c
i Tapirus_indicus.TapInd_scaffold_9301                   I 8 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    385545  8 +    539355 tatttgc------------------c
i Tapirus_terrestris.TapTer_scaffold_755                 I 8 C 0
s Tarsius_lariang.k141_2201908                               24033  8 +     70052 tatttgt------------------c
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_2029956                               3378  8 +      4644 tatttgt------------------c
i Tarsius_wallacei.k141_2029956                          C 0 C 0
s Theropithecus_gelada.CM009954.1                        186425823  8 + 186847797 TATTTGT------------------C
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   3038  8 +      8208 tatttgC------------------C
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Trachypithecus_auratus.k141_722599                          8228  8 -     20410 TATTTGT------------------C
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    12422  8 +     15221 TATTTGT------------------C
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        8329  8 +     19930 TATTTGT------------------C
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       4758  8 -     19997 TATTTGT------------------C
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            44878  8 -     60166 TATTTGT------------------C
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        12350  8 -     27529 TATTTGT------------------C
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     12292  8 -     18194 TATTTGT------------------C
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           6025  8 -     21137 TATTTGT------------------C
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    4728  8 -     10723 TATTTGT------------------C
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         3880  8 +      9834 TATTTGT------------------C
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        22196  8 +     32220 TATTTGT------------------C
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5936295  8 +   6242583 TATTTGT------------------C
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        5543  8 +     20839 TATTTGT------------------C
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2152782  8 +   4065304 CATTTAT------------------C
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     6397  8 -     10553 CATTTAT------------------C
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4848784  8 -   5085361 catttgc------------------c
i Ursus_maritimus.KK499267.1                             I 8 C 0
s Varecia_rubra.k141_590885                                   9351  8 +     50397 tATTTGT------------------C
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              9405  8 +     24756 tATTTGT------------------C
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5370251  8 -   5488506 tatttga------------------c
i Vicugna_pacos.KN270157.1                               I 8 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  9269  8 -     43706 catttgc------------------c
i Vulpes_lagopus.VulLag_flattened_line_30954             I 8 C 0
s Xerus_inauris.XerIna_scaffold_48378                        22477  8 -     24430 TATTTGT------------------C
i Xerus_inauris.XerIna_scaffold_48378                    I 377 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          3501  8 +     86975 aatttgc------------------c
i Zalophus_californianus.ZalCal_flattened_line_17732     I 8 C 0
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519  0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188  0 +      1777 C
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Mus_pahari.LT608297.1                                   31352613  0 -  89631738 C
e Mus_spretus.CM004101.1                                  90750023  0 - 130317789 C
e Mus_musculus.chr8                                       87647945  0 - 129401213 C
e Mus_caroli.LT608237.1                                   84358956  0 - 120012414 C
e Chrysochloris_asiatica.ChrAsi_scaffold_172426               9947 50 -     10935 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383  9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11181  0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rattus_norvegicus.chr16                                 53568028  0 +  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Psammomys_obesus.NESX01036370.1                             8194  0 -     21651 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18191775  0 -  18517816 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    77176  0 +    102263 C
e Ondatra_zibethicus.OndZib_scaffold_46174                   22102  0 +     28053 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11257986  0 -  27267610 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12180347  0 -  29670104 C
e Meriones_unguiculatus.MerUng_scaffold_7390                 30552  0 +    140813 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Ellobius_talpinus.LOJH01109367.1                            3529  0 -      6299 C
e Ellobius_lutescens.LOEQ01008920.1                          17476  0 -    110024 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Crocidura_indochinensis.CroInd_scaffold_287352              1624  0 +      4208 I
e Cricetulus_griseus.LT883664.1                           11665287  0 + 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_18520                 47948  0 +     63868 C
e Condylura_cristata.JH655891.1                           17547132  5 -  53390261 I
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     71884  0 -     89534 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     68248  0 +     87051 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       4015 10 +     62944 ATA------------------------TGATAGG
s Acinonyx_jubatus.LLWD01001279.1                           825657 10 -   1699592 aca------------------------taatggg
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     68248  9 +     87051 -AA------------------------TTATAGG
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9508914 10 -  29979442 aca------------------------taatggg
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             77703 10 -    347723 aca------------------------taatggg
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     71884 33 -     89534 -GATACATTGCAATTTGTATTTTCACCTTATTGG
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   11934 10 -     52922 ATA------------------------TGTTAGG
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         11868 10 -     28001 ATA------------------------TGTTAGG
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          2314 10 -     18505 ATA------------------------TGTTAGG
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           3163 10 -     12518 ATA------------------------TGTTAGG
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                               767 10 -     27731 ATA------------------------TTGTAGG
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                 890 10 +      3134 ATA------------------------TTGTAGG
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               1028 10 -     45847 ATA------------------------TTGTAGG
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                22232 10 +     25266 ATA------------------------TTGTAGG
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           1416 10 +      2906 ATA------------------------TTGTAGG
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            15529 10 -     18578 ATA------------------------TTGTAGG
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                               916 10 +     47717 ATA------------------------TTGTAGG
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             1047 10 -      3544 ATA------------------------TTGTAGG
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             12266 10 +     50774 ATA------------------------TTGTAGG
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  12889 10 -     33861 ATA------------------------TTATAGG
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            12910 10 -     34016 ATA------------------------TTATAGG
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4295306 10 -   5030052 ATA------------------------TTATAGG
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             12911 10 -     34685 ATA------------------------TTAAAGG
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               26032 10 -     47192 ATA------------------------TTATAGG
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       9901 10 +     20879 GCA------------------------TTTTAGG
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                        9283 10 +     14667 ATA------------------------TTATAGG
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Avahi_laniger.k141_765380                                  51613 10 -     92717 aca------------------------ttatagg
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              52242 10 +     85213 ACA------------------------TTATAGA
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             2653 10 -     10423 ATA------------------------GTCTAGG
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             22153 10 +     31915 ATA------------------------TTCTAGG
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            2623 10 +      5267 ATA------------------------GTCTCGG
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23587837 10 - 189096842 ATA------------------------GTCTAGG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              9367 10 -     12001 ATA------------------------GTCTAGG
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10000759 10 -  17673402 aca------------------------ttatggg
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2333223 10 -   7040546 aca------------------------ttatggg
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  401499 10 -   1652518 aca------------------------ttatggg
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17797661 10 -  60362399 aca------------------------taatggg
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    183718 10 -    185531 aca------------------------taatggg
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9033104 10 -   9314153 aca------------------------taatggg
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17957369 10 -  59632846 aca------------------------taatggg
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18498707 10 +  63665305 aca------------------------taatggg
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           153919 10 -    496798 ACA------------------------TTATGTt
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    136022 10 +    179628 ACA------------------------TTATAGA
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     91339 10 +    217609 ACA------------------------TTATGGG
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          7277 10 -     11392 ATA------------------------GTCTAGG
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               3375 10 -      7577 ATA------------------------GTCTAGG
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         3430 10 +     31688 ACA------------------------TTATGTT
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12229776 10 +  27778364 aca------------------------caatggg
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634            803 10 -     25243 aca------------------------caatggg
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4472893 10 +   4669795 ATA------------------------TGTTAGG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        11440 10 -     19203 ATA------------------------TGTTAGG
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           5862 10 +      8260 ATA------------------------TGTTAGG
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           6089 10 +     27781 ATA------------------------TGTTAGG
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         6245 10 -     20310 ATA------------------------TGTTAGG
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           9224 10 +     29689 ATA------------------------TGTTAGG
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            3654 10 +      9989 ATA------------------------TGTTAGG
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          11903 10 -     27936 ATA------------------------TGTTAGG
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                             778 10 -     17152 ATA------------------------TGTTAGG
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38814308 10 +  39242232 ATA------------------------TGTTAGG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21220007 10 -  21565898 ATA------------------------TGTTAGG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       37126 10 -     53127 ATA------------------------TGTTAGG
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        4407 10 +      7159 ATA------------------------TGTTAGG
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       11929 10 -     27947 ATA------------------------TGTTAGG
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         11902 10 +     17596 ATA------------------------TGTTAGG
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          1125 10 +     26000 ATA------------------------TGTTAGG
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            5859 10 -      6351 ACA------------------------CAATGAA
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             19029 10 -     52598 ACA------------------------TTATAGG
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           14374 10 +     57038 ACA------------------------TTATAGG
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           8301 10 +     11226 ATA------------------------TTCTAGG
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18425865 10 -  18827391 ATA------------------------TGTTAGG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       12303 10 -     50209 ATA------------------------TGTTAGG
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135419311 10 + 135778131 ATA------------------------TGTTAGG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 16204 10 +     19366 aca------------------------caatgaa
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            171303 10 +    839153 aca------------------------caatgaa
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_172426               9997  9 -     10935 -ca------------------------ttatagg
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          I 50 I 448
s Colobus_angolensis.KN981557.1                            1907827 10 +   2368649 ATA------------------------TGTTAGG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199947499 10 + 200372422 ATA------------------------TGTTAGG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              34370  5 +     84244 ATG------------------------GG-----
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          12356 10 -     20389 ata------------------------taatggg
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 47948  9 +     63868 -AA------------------------TTACAGG
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11665287  9 + 224834208 -AA------------------------TTATAGG
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             26834 10 -     87169 aca------------------------taatggg
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    835093 10 +   1526836 aca------------------------gagtagg
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            62186  8 +   2246927 aca------------------------caat--a
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12535232 10 -  12879189 aca------------------------ttatggg
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  671628 10 +   1390856 aca------------------------caatggg
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    4384 10 +    198055 aca------------------------caatggg
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE759718.1                                   8876 10 +     11740 aca------------------------taatggg
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1089415 10 +  10337057 GCA------------------------TAATAGA
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          17476  9 -    110024 -AA------------------------TTAAAGG
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01109367.1                            3529  9 -      6299 -AA------------------------TTAAAGG
i Ellobius_talpinus.LOJH01109367.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16327671 10 -  41312741 aca------------------------taatggg
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1281683 10 +   4378816 aca------------------------taatggg
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18529504 10 -  39960074 aca------------------------taatggg
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               31519 10 +    498745 aca------------------------taatggg
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21202501 10 -  21539334 ATA------------------------TGTTAGG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              11721 10 -     14127 GCA------------------------TTATAGG
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                4419 10 -     16928 GCA------------------------TTATAGG
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              13456 10 -     25546 GCA------------------------TTATAGG
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            10646 10 +     26330 GCA------------------------TTATAGG
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 11885 10 +     23973 GCA------------------------TTATAGG
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                10646 10 +     75513 GCA------------------------TTATAGG
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  8588 10 +     97555 GCA------------------------TTATAGG
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            11524 10 +     26496 GCA------------------------TTATAGG
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  2121 10 -     17153 GCA------------------------TTATAGG
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              11697 10 +    111500 GCA------------------------TTATAGG
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20235528 10 + 206538554 aca------------------------taatggg
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20194371 10 + 205367284 ACA------------------------TAATGGG
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  7885 10 -     36744 ACA------------------------TAATGGG
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     424255  9 -    453645 ata-------------------------tatagg
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             1962  9 +     11339 ATA-------------------------TATAGG
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1959596                            5769  9 +      6795 ATA-------------------------TATAGG
i Galagoides_demidoff.k141_1959596                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_197845               1985 10 -      3123 aca------------------------ttacagg
i Galeopterus_variegatus.GalVar_scaffold_197845          C 0 I 28
s Gorilla_beringei.k141_3596273                              13268 10 -     32273 ATA------------------------TGATAGG
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186335416 10 + 186649187 ata------------------------tgatagg
i Gorilla_gorilla.LT578341.1                             C 0 I 28
s Hapalemur_alaotrensis.k141_170648                           4775 10 -     19426 GCA------------------------TTATAGG
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              9924 10 -     15286 ACA------------------------TTATAGG
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             11563 10 +     18253 GCA------------------------TTATAGG
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         11664 10 -     41752 GCA------------------------TTATAGG
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         11502 10 -     16460 GCA------------------------TTATAGG
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               240683 10 +    327341 ACA------------------------TAATGGG
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 657 10 +       961 AAA------------------------TAATAGG
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       110161 10 +   1711038 aca------------------------taatggg
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               41584 10 +     43066 ACA------------------------TAATGGG
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 I 28
s Hoolock_leuconedys.ctg274                                    432079 10 +    630532 ATA------------------------TGATAGG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  42810 10 +     55795 aca------------------------taatggg
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_307679                               15016 10 -     15490 ATA------------------------TGATAGG
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              57022 10 +     67168 ATA------------------------TGATAGG
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189540672 10 - 191637585 ATA------------------------TGATAGG
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3333566 10 -  11177569 ATA------------------------TGATAGG
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7518043 10 -   7955117 aca------------------------tcatagg
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   20469 10 +     31101 GCA------------------------TTATAGG
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15522026 10 -  30322482 GCA------------------------TTATAGG
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        5018 10 +     64341 ATA------------------------TTCTAGG
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           2078 10 +      4941 ATA------------------------TTCTAGG
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4946 10 +     35603 ATA------------------------TTCTAGG
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    26417 10 +     38576 ATA------------------------TTCTAGG
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         23114 10 +     66356 ATA------------------------TTCTAGG
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          8907 10 -     23766 ACA------------------------TTATAGG
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             26854 10 +     45836 ACA------------------------TTATAGG
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_320948                          1078 10 -      1719 GCA------------------------TTATAGG
i Lepilemur_ruficaudatus.k141_320948                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      24909 10 +     54090 ACA------------------------TTATAGG
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.APMU01168965.1                       451 10 -      1094 aca------------------------taatggg
i Leptonychotes_weddellii.APMU01168965.1                 C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     3907 10 -     14121 ACA------------------------CTACAGG
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1434438 10 +   1826925 ATA------------------------TGTTAGG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            3711 10 +     11245 ATA------------------------TTATAAG
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1002549 10 +   6120653 ATA------------------------TTATAAG
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214942 10 -  43346337 aaa------------------------taataga
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17953609 10 -  59628241 aca------------------------taatggg
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               4251 10 +     40492 ATA------------------------TGTTAGG
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59673513 10 +  60120075 ATA------------------------TGTTAGG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 10007 10 -     26193 ATA------------------------TGTTAGG
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            77811 10 -    114318 ATA------------------------TGTTAGG
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  3510 10 -     23192 ATA------------------------TGTTAGG
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                12970 10 -     29190 ATA------------------------TGTTAGG
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  21538 10 +     37952 ATA------------------------TGTTAGG
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186836626 10 + 187317192 ATA------------------------TGTTAGG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25455189 10 -  25927173 ATA------------------------TGTTAGG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  77387 10 +     89720 ATA------------------------TGTTAGG
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 4384 10 +     20474 ATA------------------------TGTTAGG
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   4186 10 -     14993 ATA------------------------TGTTAGG
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  327056 10 -    668171 ATA------------------------TGTTAGG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 2496 10 -     24072 ATA------------------------TGTTAGG
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               23125 10 -     45290 ATA------------------------TGTTAGG
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88950 10 +     94391 ACA------------------------TAATGGG
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23934712 10 -  24302211 ATA------------------------TGTTAGG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               348845 10 +    752769 ATA------------------------TGTTAGG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              17801 10 +    737560 aca------------------------taatgag
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              49187 10 -    317179 aca------------------------taatgag
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33100351 10 -  40650429 aca------------------------tcatagg
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         8697  6 -    207569 t----------------------------TTGGG
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              8390 10 +     13704 aca------------------------taatggg
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 30552  8 +    140813 --A------------------------TTATAGG
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12180347  9 -  29670104 -GA------------------------TTATAGG
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                3199 10 -      7380 ATA------------------------GTCTAGG
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               2265 10 +     18990 ATA------------------------GTCTAGG
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      3204 10 -      7356 ATA------------------------GTCTAGG
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18289413 10 -  93316391 ACA------------------------TTatagg
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    17504  4 -    145209 ACA------------------------T------
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 6
s Microtus_ochrogaster.CM001695.1                         11257986  9 -  27267610 -AA------------------------TTAAAGG
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miopithecus_ogouensis.k141_534055                           6432 10 -     28506 ATA------------------------TGTTAGG
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         3865 10 -      8324 aca------------------------taatggg
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      6986 10 -     37649 gca------------------------ttataag
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 139646 10 -    366855 ACA------------------------TAACGGG
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   33790 10 +     37127 ACA------------------------TAATGGG
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Mus_caroli.LT608237.1                                   84358956  9 - 120012414 -AA------------------------TTATAGG
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87647945  9 - 129401213 -AA------------------------TTATAGG
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31352613  9 -  89631738 -AA------------------------TTATAGG
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90750023  9 - 130317789 -AA------------------------TTATAGG
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               299569 10 -  14710649 ata------------------------ttatggg
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187127 10 +    196477 ata------------------------caatgaa
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nasalis_larvatus.k141_413338                               12428 10 +     21681 ATA------------------------TGTTAGG
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9147867 10 -   9404916 aca------------------------taatggg
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102577472 10 - 196305487 ATA------------------------TTATAGG
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             5158 10 +      8486 ATA------------------------TTATAGG
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105747899 10 + 199412804 ATA------------------------TTATAGG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1360990 10 +   3988456 aca------------------------tcacgag
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              505015 10 -   2017862 aca------------------------taatggg
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   22102  9 +     28053 -AA------------------------TTAAAAG
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    77176  9 +    102263 -AA------------------------TTGTAGG
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               7466 10 -     18566 ACA------------------------TTATAGA
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67144752 10 + 174332312 ACA------------------------CTACAGG
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       460623 10 -    559221 aca------------------------taatggg
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         1797  9 +      8798 ATA-------------------------TATAGG
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             693964  9 -   1103335 ATA-------------------------TATAGG
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    41365 10 +     80009 ATA------------------------TGATAGG
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189140277 10 + 189151597 ATA------------------------TGATAGG
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  149537 10 +    230217 aca------------------------taatggg
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                262742 10 +  18783137 aca------------------------taatggg
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4719379 10 -   8748460 aca------------------------taatggg
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183440466 10 + 183742232 ATA------------------------TGTTAGG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             4159 10 +     20448 ATA------------------------TGTTAGG
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20560965 10 +  20919399 ATA------------------------TGTTAGG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   2903 10 +     41871 ATA------------------------TGTTAGG
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     6189 10 +     27711 ATA------------------------TGTTAGG
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  6268 10 +      9205 ATA------------------------TGTTAGG
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11000 10 -     78924 aca------------------------taatggg
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            7924 10 +     13100 GTA------------------------TTATAGG
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             6302 10 +     25941 gta------------------------ttatagg
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18191775  9 -  18517816 -AA------------------------CTATAGA
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Piliocolobus_badius.k141_1234363                           40936 10 +     62158 ATA------------------------TGTTAGG
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        35665 10 +     89929 ATA------------------------TGTTAGG
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            37081 10 +     51399 ATA------------------------TGTTAGG
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14293319 10 -  14605196 ATA------------------------TGTTAGG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189128392 14 + 189387572 ATAT-----G-A-T-------------TGATAGG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9568000 14 +   9816681 ATAT-----G-A-T-------------TGATAGG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               70591 10 -     81375 ATA------------------------TGTTAGG
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              2411 10 +     19060 ATA------------------------TGTTAGG
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 10406 10 -     22811 AAA------------------------TAATAGG
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2594676 10 -   4620579 ACA------------------------TTATAGG
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     988667 10 +   2598838 GCA------------------------TTATAGG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          26977 10 +     38485 GCA------------------------TTATAGG
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             3137 10 +      4256 aca------------------------ttatagg
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          24497 10 +     35766 GCA------------------------TTATAGG
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           2680 10 -     24134 ACA------------------------TTATAGG
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        26494 10 -     67325 gca------------------------ttatagg
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           2730 10 -      6182 GCA------------------------TTATAGG
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             8194  8 -     21651 --A------------------------TTATAGG
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            13037 10 -     21811 aca------------------------taacagg
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         38581 10 +     42204 aca------------------------taatggg
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22975135 10 +  28871421 aca------------------------taatgag
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1358224 10 +   4952924 aca------------------------taatgag
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20272656 10 -  38429054 aca------------------------taatggg
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             12426 10 -     91421 ATA------------------------GGTTAGG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7606552 10 +   7812017 ATA------------------------GGTTAGG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             12400 10 -     72585 ATA------------------------GGTTAGG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53568028  9 +  90668790 -AA------------------------TTATAAG
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             4107 10 -     11128 ATA------------------------TGTTAGG
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91233462 10 - 195417433 ATA------------------------TGTTAGG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7669111 10 +   7961872 ATA------------------------TGTTAGG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                86144 10 -     96226 aca------------------------tgatggg
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               5326 10 -      8359 ATA------------------------TTCTAGG
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            11634 10 -     13588 ATA------------------------TTCTAGG
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              5272 10 -      6207 ATA------------------------TTCTAGG
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               10999 10 +     13640 ATA------------------------TTCTAGG
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               5862 10 +      8564 ATA------------------------TTCTAGG
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209466139 10 + 209938924 ATA------------------------TTCTAGG
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 5353 10 -      9399 ATA------------------------TTCTAGG
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 2499 10 +      3421 ATA------------------------TTCTAGG
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119948677 10 - 121099817 ATA------------------------TTATAGG
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       21144 10 +     46362 ATA------------------------TTATAGG
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               21239 10 +     45824 ATA------------------------TTATAGG
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             37854 10 -     64574 ATA------------------------TTATAGG
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                                860 10 -     23631 ATA------------------------TTATAGG
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 21132 10 -     61129 ATA------------------------TTATAGG
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          16934 10 -     19888 ATA------------------------TGTTAGG
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      24137 10 +     39453 ATA------------------------TGTTAGG
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            4663 10 +     27826 ATA------------------------TGTTAGG
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             4183 10 -     19483 ATA------------------------TGTTAGG
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      4245 10 +      7198 ATA------------------------TGTTAGG
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         12505 10 +     15514 ATA------------------------TGTTAGG
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11181  9 -     12148 -AA------------------------GTATAGG
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               2165 10 +   1910179 aca------------------------taatggg
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1951239 10 -   3870691 ACA------------------------ACAAAGG
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             29098 10 +     97271 aca------------------------taatggg
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              16684 10 -    196729 aca------------------------taatggg
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.JH118708.1                                      33873 10 -     47482 aca------------------------ttatggg
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1090714 10 -   1523678 ATA------------------------TGATAGG
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 8978 10 +     41958 ATG------------------------TAATGTG
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 70481 10 +    116680 ATA------------------------CAACGAA
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      117100 10 -    156842 aca------------------------taatggg
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    385553 10 +    539355 aca------------------------taatggg
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               24041 10 +     70052 aca------------------------ttatggt
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_2029956                               3386 10 +      4644 aca------------------------ttatggt
i Tarsius_wallacei.k141_2029956                          C 0 C 0
s Theropithecus_gelada.CM009954.1                        186425831 10 + 186847797 ATA------------------------TGTTAGG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   3046 10 +      8208 ACA------------------------CAATAAA
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Trachypithecus_auratus.k141_722599                          8236 10 -     20410 ATA------------------------TGTTAGG
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    12430 10 +     15221 ATA------------------------TGTTAGG
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        8337 10 +     19930 ATA------------------------TGTTAGG
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       4766 10 -     19997 ATA------------------------TGTTAGG
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            44886 10 -     60166 ATA------------------------TGTTAGG
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        12358 10 -     27529 ATA------------------------TGTTAGG
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     12300 10 -     18194 ATA------------------------TGTTAGG
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           6033 10 -     21137 ATA------------------------TGTTAGG
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    4736 10 -     10723 ATA------------------------TGTTAGG
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         3888 10 +      9834 ATA------------------------TGTTAGG
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        22204 10 +     32220 ATA------------------------TGTTAGG
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5936303 10 +   6242583 ATA------------------------TGTTAGG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        5551 10 +     20839 ATA------------------------TGTTAGG
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2152790  1 +   4065304 T---------------------------------
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     6405  1 -     10553 T---------------------------------
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4848792 10 -   5085361 aca------------------------taatggg
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   9359 10 +     50397 ACA------------------------TTATAGG
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              9413 10 +     24756 ACA------------------------TTATAGG
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5370259 10 -   5488506 aca------------------------ttatggg
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  9277 10 -     43706 aca------------------------taatggg
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        22485 10 -     24430 ACA------------------------TTATAGG
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          3509 10 +     86975 aca------------------------taatggg
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519  0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188  0 +      1777 C
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383  9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Crocidura_indochinensis.CroInd_scaffold_287352              1624  0 +      4208 I
e Condylura_cristata.JH655891.1                           17547132  5 -  53390261 I
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       4025 28 +     62944 CGATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
s Acinonyx_jubatus.LLWD01001279.1                           825667 28 -   1699592 caatca--ataaa----ta-ctg----gt-----t-tagt-a-aaa----g
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     68257 26 +     87051 TAATAG--GTAAA----TA-TTA----GC-----T-TAAT-A-AA------
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9508924 28 -  29979442 caatca--ataaa----ta-ctg----gt-----t-taat-a-aaa----g
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             77713 28 -    347723 caatca--ataaa----ta-ctg----gt-----t-taat-a-aaa----g
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     71917 28 -     89534 CAATCA--ATAAA----TA-TTG----CT-----T-TAAT-G-AAA----G
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 5
s Allenopithecus_nigroviridis.k141_3361533                   11944 28 -     52922 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         11878 28 -     28001 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          2324 28 -     18505 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           3173 28 -     12518 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                               777 28 -     27731 CAATCA--GTCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                 900 28 +      3134 CAATCA--GTCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               1038 28 -     45847 CAATCA--GTCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                22242 28 +     25266 CAATCA--GTCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           1426 28 +      2906 CAATCA--GTCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            15539 28 -     18578 CAATCA--GTCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                               926 28 +     47717 CAATCA--GTCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             1057 28 -      3544 CAATCA--GTCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             12276 28 +     50774 CAATCG--GTCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  12899 28 -     33861 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            12920 28 -     34016 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4295316 28 -   5030052 CAATCA--ATCAA----TA-TTg----gt-----t-taat-a-aaa----g
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             12921 28 -     34685 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               26042 28 -     47192 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       9911 32 +     20879 CAACCA--ATAAA----TA-TTA----GT-----T-CAAT-G-AAAGCAAG
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                        9293 28 +     14667 CAATCA--ATAAA----TG-TCA----GC-----T-TCAT-A-AAG----G
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Avahi_laniger.k141_765380                                  51623 26 -     92717 caatca--ataaa----ta-ttg----gc-----t-taatga-a-------
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              52252 26 +     85213 CAATCA--ATAAA----TA-TTG----GC-----T-TAATGA-A-------
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             2663 28 -     10423 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             22163 28 +     31915 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            2633 28 +      5267 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23587847 28 - 189096842 CAGTCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              9377 28 -     12001 CAGTCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10000769 28 -  17673402 caatta--ataaa----ta-ctg----gc-----t-taat-t-aaa----a
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2333233 28 -   7040546 caatta--ataaa----ta-ctg----gc-----t-taat-t-aaa----a
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  401509 28 -   1652518 caatta--ataaa----ta-ctg----gc-----t-taat-t-aaa----a
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17797671 28 -  60362399 caatca--ataaa----ta-ctg----gt-----t-taat-a-aaA----G
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    183728 28 -    185531 caatca--ataaa----ta-ctg----gt-----t-taat-a-aaA----G
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9033114 28 -   9314153 caatca--ataaa----ta-ctg----gt-----t-taat-a-aaa----g
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17957379 28 -  59632846 caatca--ataaa----ta-ctg----gt-----t-taat-a-aaa----g
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18498717 28 +  63665305 caatca--ataaa----ta-ctg----gt-----t-taat-a-aaa----g
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           153929 28 -    496798 caatca--ataaa----ta-ttg----gt-----t-taat-g-aaa----g
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    136032 25 +    179628 TAATA------AA----TA-CTA----GT-----T-TAAT-GAAAA----G
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 4
s Catagonus_wagneri.CatWag_scaffold_2839                     91349 28 +    217609 CACTTA--ATAAA----TA-TTG----GT-----T-TAAT-C-AAA----A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          7287 28 -     11392 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               3385 28 -      7577 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         3440 28 +     31688 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-G-AAA----G
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12229786 28 +  27778364 caatca--ataaa----ta-ttg----at-----t-taat-g-aaa----g
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634            813 28 -     25243 caatca--ataaa----ta-ttg----at-----t-taat-g-aaA----G
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4472903 28 +   4669795 CAATCA--ATCAA----TA-TTG----gt-----t-taat-a-aaa----g
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        11450 28 -     19203 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           5872 28 +      8260 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           6099 28 +     27781 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         6255 28 -     20310 CAATCA--ATCAA----TA-TCG----GT-----T-TAAT-A-AAA----G
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           9234 28 +     29689 CAATCA--ATCAA----TA-TCG----GT-----T-TAAT-A-AAA----G
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            3664 28 +      9989 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          11913 28 -     27936 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                             788 28 -     17152 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38814318 28 +  39242232 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21220017 28 -  21565898 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       37136 28 -     53127 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        4417 28 +      7159 CAATCA--ATCAA----TA-TCG----GT-----T-TAAT-A-AAA----G
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       11939 28 -     27947 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         11912 28 +     17596 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          1135 28 +     26000 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            5869 21 -      6351 TGACCA--CTAAC----TA-TCT----GT-----T-TA-------------
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 I 3
s Cheirogaleus_major.k141_333249                             19039 26 -     52598 CAATCA--ATAAA----TA-TTG----GC-----T-TAATGA-A-------
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           14384 26 +     57038 CAATCA--ATAAA----TA-TTG----GC-----T-TAATGA-A-------
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           8311 28 +     11226 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18425875 28 -  18827391 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       12313 28 -     50209 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135419321 28 + 135778131 CAATCA--ATCAA----TA-TTG----Gt-----t-taat-a-aaa----g
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 16214 28 +     19366 caacca--ataaa----ta-ttt----gt-----t-taat-g-aaa----g
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            171313 28 +    839153 caacca--ataaa----ta-ttt----gt-----t-taat-g-aaa----g
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_172426              10454 24 -     10935 CAAT----A--AA----TA-TTT----GT-----T-TAAT-G-AAA----T
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          I 448 C 0
s Colobus_angolensis.KN981557.1                            1907837 28 +   2368649 CAATCA--ATCAA----TA-TTG----gt-----t-taat-a-aaa----g
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199947509 32 + 200372422 CAATCA--ATCAATCAATA-TTG----GT-----T-TAAT-A-AAA----G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              34375 28 +     84244 ----CA--ATCAATCAATA-TTG----GT-----T-TAAT-A-AAA----G
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          12366 28 -     20389 caagca--ataaa----ta-ttg----gt-----t-tagt-g-gaA----G
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 47957 26 +     63868 TAATAG--ATAAA----TA-CTG----GT-----T-TAAC-A-AA------
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11665296 22 + 224834208 TAATAG--ATAaa----ta-tta----gt-----t-taa------------
i Cricetulus_griseus.LT883664.1                          C 0 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_16129             26844 28 -     87169 caatca--ataaa----ta-ctg----gt-----t-taat-a-aaa----g
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    835103 32 +   1526836 ttatca--gtaaa----tg-ttggttggt-----t-taat-g-aaA----G
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            62194 21 +   2246927 cgatca--ataaa----ta-ttt----gt-----t-ta-------------
i Dasypus_novemcinctus.JH564415.1                        C 0 I 3
s Daubentonia_madagascariensis.ctg71                      12535242 29 -  12879189 caatca--ataaa----ta-ttg----gc-----t-taatga-aAA----G
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  671638 28 +   1390856 caatca--ataaa----ta-ttg----at-----t-taat-g-aaa----g
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    4394 28 +    198055 caatca--ataaa----ta-ttg----at-----t-taat-g-aaA----G
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE759718.1                                   8886 28 +     11740 caagca--ataaa----ta-ttg----gt-----t-taat-g-gaa----g
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1089425 15 +  10337057 Caatca-----aa----ta-ttt----at----------------------
i Elephantulus_edwardii.JH947257.1                       C 0 I 9
s Ellobius_lutescens.LOEQ01008920.1                          17485 22 -    110024 TAATAG--Ataaa----ta-tta----gt-----t-taa------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 1
s Ellobius_talpinus.LOJH01109367.1                            3538 22 -      6299 TAATAG--Ataaa----ta-tta----gt-----t-taa------------
i Ellobius_talpinus.LOJH01109367.1                       C 0 I 1
s Enhydra_lutris.KZ291758.1                               16327681 28 -  41312741 cactca--atata----tg-ctg----gt-----t-taat-a-aaa----g
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1281693 28 +   4378816 aaatca--ataaa----ta-ttg----at-----t-taat-g-aaa----g
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18529514 28 -  39960074 aaatca--ataaa----ta-ttg----at-----t-taat-g-aaa----g
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               31529 28 +    498745 aaatca--ataaa----ta-ttg----at-----t-taat-g-aaa----g
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21202511 28 -  21539334 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              11731 26 -     14127 CAATTA--ATAAA----CA-TTG----GC-----T-TAATGA-A-------
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                4429 26 -     16928 CAATTA--ATAAA----CA-TTG----GC-----T-TAATGA-A-------
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              13466 26 -     25546 CAATTA--ATAAA----CA-TTG----GC-----T-TAATGA-A-------
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            10656 26 +     26330 CAATTA--ATAAA----CA-TTG----GC-----T-TAATGA-A-------
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 11895 26 +     23973 CAATTA--ATAAA----CA-TTG----GC-----T-TAATGA-A-------
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                10656 26 +     75513 CAATTA--ATAAA----CA-TTG----GC-----T-TAATGA-A-------
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  8598 26 +     97555 CAATTA--ATAAA----CA-TTG----GC-----T-TAATGA-A-------
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            11534 26 +     26496 CAATTA--ATAAA----CA-TTG----GC-----T-TAATGA-A-------
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  2131 26 -     17153 CAATTA--ATAAA----CA-TTG----GC-----T-TAATGA-A-------
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              11707 26 +    111500 CAATTA--ATAAA----CA-TTG----GC-----T-TAATGA-A-------
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20235538 28 + 206538554 caatca--ataaa----ta-ctg----gt-----t-tagt-a-aaa----g
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20194381 28 + 205367284 CAATCA--ATAAA----TA-CTG----GT-----t-tagt-a-aaa----g
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  7895 28 -     36744 CAATCA--ATAAA----TA-CTG----GT-----T-TAGT-A-AAA----G
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     424264 28 -    453645 aaatca--ataaa----ta-tct----gc-----t-taat-a-aag----g
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             1971 28 +     11339 AAATCA--ATAAA----TA-TCT----GC-----T-TAAT-A-AAG----G
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1959596                            5778 28 +      6795 AAATCA--ATAAA----TA-TCT----GC-----T-TAAT-A-AAG----G
i Galagoides_demidoff.k141_1959596                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_416291                 70 28 +      1204 CAATCA--ATAAA----TA-TTG----GT-----T-TAAT-G-AAA----G
i Galeopterus_variegatus.GalVar_scaffold_416291          n 28 I 319
s Gorilla_beringei.k141_3596273                              13278 28 -     32273 CAATCA--ATCAC----TA-TTG----GT-----T-TCAT-A-AAA----G
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.CYUI03001814.1                             29788 28 -     31004 caatca--atcaa----ta-ttg----gt-----t-taat-a-aaa----g
i Gorilla_gorilla.CYUI03001814.1                         I 290 I 329
s Hapalemur_alaotrensis.k141_170648                           4785 26 -     19426 CAATCA--ACAAA----CA-TTG----GC-----T-TAATGA-A-------
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              9934 26 -     15286 CAATCA--ACAAA----CA-TTG----GC-----T-TAATGA-A-------
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             11573 26 +     18253 CAATCA--ACAAA----CA-TTG----GC-----T-TAATGA-A-------
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         11674 26 -     41752 CAATCA--ACAAA----CA-TTG----GC-----T-TAATGA-A-------
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         11512 26 -     16460 CAATCA--ACAAA----CA-TTG----GC-----T-TAATGA-A-------
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               240693 24 +    327341 AAATCA--AT--------A-CTT----GT-----T-TAAT-A-AAA----G
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 667 28 +       961 CCATCAATA--AA----TA-TTT----GT-----T-TCAC-A-AAA----C
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       110171 28 +   1711038 caagaa--ataaa----ta-ttg----gt-----t-taat-g-taa----g
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_216130                240 28 -      1713 CAAGAA--ATAAA----TA-TTG----GT-----T-TAAT-G-TAA----G
i Hipposideros_galeritus.HipGal_scaffold_216130          n 28 I 137
s Hoolock_leuconedys.ctg274                                    432089 28 +    630532 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  42820 28 +     55795 caatca--ataaa----tg-ctg----gt-----t-taat-a-gaa----g
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_307679                               15026 28 -     15490 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              57032 28 +     67168 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189540682 28 - 191637585 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3333576 28 -  11177569 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7518053 32 -   7955117 caatca--attaa----ta-ttg----gt-----t-taat-g-aaagcaag
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   20479 26 +     31101 CAATCA--ATAAA----TA-TTG----GC-----T-TAATGA-A-------
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15522036 26 -  30322482 CAATCA--ATAAA----CA-TTG----GC-----T-TAATGA-A-------
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        5028 28 +     64341 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           2088 28 +      4941 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4956 28 +     35603 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    26427 28 +     38576 CAGTCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         23124 28 +     66356 CAGTCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          8917 26 -     23766 CAATCA--GTAAA----TA-TTG----GC-----T-TAATGA-A-------
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             26864 26 +     45836 CAATCA--GTAAA----TA-TTG----GC-----T-TAATGA-A-------
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_320948                          1088 26 -      1719 CAATCA--ATAAA----TA-TTG----GC-----T-TAATGA-A-------
i Lepilemur_ruficaudatus.k141_320948                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      24919 26 +     54090 CAATCA--GTAAA----TA-TTG----GC-----T-TAATGA-A-------
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.APMU01168965.1                       461 28 -      1094 caatca--ataaa----ta-ctg----gt-----t-taat-a-aaa----g
i Leptonychotes_weddellii.APMU01168965.1                 C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     3917 28 -     14121 TAATCA--ATACA----TA-TTG----GT-----G-TGAT-T-AAA----G
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1434448 28 +   1826925 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            3721 28 +     11245 CAATCA--ATAAA----TA-TCG----GC-----T-TCAT-A-AAG----G
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1002559 28 +   6120653 CAATCA--ATAAA----TA-TCG----GC-----T-TCAT-A-AAG----G
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214952 28 -  43346337 caatcaata--aa----ta-ttt----gt-----t-taat-g-aaa----c
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17953619 28 -  59628241 caatca--ataaa----ta-ctg----gt-----t-taat-a-aaa----g
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               4261 28 +     40492 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59673523 28 +  60120075 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 10017 28 -     26193 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            77821 28 -    114318 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  3520 28 -     23192 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                12980 28 -     29190 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  21548 28 +     37952 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186836636 28 + 187317192 CAATCA--ATCAA----TA-TTG----gt-----t-taat-a-aaa----g
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25455199 28 -  25927173 CAATCA--ATCAA----TA-TTG----gt-----t-taat-a-aaa----g
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  77397 28 +     89720 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 4394 28 +     20474 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   4196 28 -     14993 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  327066 28 -    668171 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 2506 28 -     24072 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               23135 28 -     45290 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88960 28 +     94391 CAAGCA--ATACA----TA-TTG----GT-----T-TAAT-G-GAA----G
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23934722 28 -  24302211 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               348855 28 +    752769 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              17811 26 +    737560 caatca--ataaa----ta-ttg----at-----t-taac-a-aa------
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              49197 26 -    317179 caatca--ataaa----ta-ttg----at-----t-taac-a-aa------
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33100361 32 -  40650429 caatca--atgaa----ta-ttg----gt-----t-taat-g-aaagcaag
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         8703 28 -    207569 CAAGCA--ATAAA----TA-TCG----GT-----T-CAAT-G-GAA----G
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              8400 28 +     13704 cactca--ataaa----tg-ctg----gt-----t-taat-a-aaA----G
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 30560 26 +    140813 TAATAG--ATAAA----TA-TTA----GT-----T-TATT-T-TT------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12180356 22 -  29670104 TAATag--gtaaa----ta-ttt----gt-----t-taa------------
i Mesocricetus_auratus.KB708134.1                        C 0 I 1
s Mico_argentatus.k141_1239457                                3209 28 -      7380 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               2275 28 +     18990 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      3214 28 -      7356 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18289423 26 -  93316391 caatca--ataaa----ta-ttg----gc-----t-taatga-a-------
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    17514 25 -    145209 CCAC----A--AA----TA-TTT----TT-----TCTAAT-G-AAA----C
i Microgale_talazaci.MicTal_scaffold_6613                I 6 C 0
s Microtus_ochrogaster.CM001695.1                         11257995 22 -  27267610 AAATAG--ATaaa----tc-cta----ta-----g-caa------------
i Microtus_ochrogaster.CM001695.1                        C 0 I 542
s Miopithecus_ogouensis.k141_534055                           6442 28 -     28506 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         3875 28 -      8324 caacca--ataaa----ta-ctg----gt-----t-taat-a-aaA----G
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      6996 26 -     37649 caatca--ataaa----ta-ttg----gc-----t-taatga-a-------
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 139656 28 -    366855 TAATCA--ATAAA----TG-CTG----GT-----T-TAAC-A-AAA----G
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   33800 24 +     37127 CAATCA--AT--------A-CTT----GT-----T-TAAT-A-AAA----G
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Mus_caroli.LT608237.1                                   84358965 31 - 120012414 TAATAg--ataaa----ta-tta----gtaaatat-aaat-a-tt------
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87647954 26 - 129401213 TAATAG--ATAAA----ta-tta----gt-----t-taat-t-tt------
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31352622 26 -  89631738 TAATAG--ATAAA----TA-TTA----GT-----T-TAAG-T-TT------
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90750032 26 - 130317789 TAATAG--ATAaa----ta-tta----gt-----t-taat-t-tt------
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               299579 28 -  14710649 cactca--ataaa----tg-ctg----gt-----t-taat-a-aaa----g
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187137 27 +    196477 caagca--ataaa----tt-ttt-----t-----t-taat-g-aaA----G
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nasalis_larvatus.k141_413338                               12438 28 +     21681 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9147877 28 -   9404916 caatca--ataaa----ta-ctg----gt-----t-taat-a-aaa----g
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102577482 28 - 196305487 CAATCC--CTAAA----TA-TCA----GC-----T-TCAT-A-AAG----G
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             5168 28 +      8486 CAATCC--CTAAA----TA-TCA----GC-----T-TCAT-A-AAG----G
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105747909 28 + 199412804 CAATCC--CTAAA----TA-TCA----GC-----T-TCAT-A-AAG----G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1361000 28 +   3988456 caatca--ataaa----ta-ttg----gt-----t-taat-g-aaA----G
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              505025 28 -   2017862 caatca--ataaa----ta-ctg----gt-----t-taat-a-aaa----g
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   22111 22 +     28053 TAATAG--ATAAA----TG-TTT----GT-----T-TAA------------
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 1
s Onychomys_torridus.OnyTor_scaffold_2986                    77185 26 +    102263 TAATGG--ATAAA----TA-TTA----GT-----T-TAAT-A-AT------
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               7476 24 -     18566 TAAT----A--AA----TA-CTT----GT-----T-TAAT-G-AAG----T
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67144762 28 + 174332312 TAATCA--ATATA----TA-TTG----GT-----G-TGAT-G-AAA----G
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       460633 28 -    559221 caatca--ataaa----ta-ctg----gt-----t-taat-a-aaa----g
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         1806 28 +      8798 AAATCA--ATAAA----TA-TCT----GC-----T-TAAT-A-AAA----G
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             693973 28 -   1103335 AAATCA--ATAAA----TA-TCT----gc-----t-taat-a-aaa----g
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    41375 28 +     80009 CAATCA--ATCAA----TA-TTG----GT-----t-taat-a-aaa----g
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189140287 28 + 189151597 CAATCA--ATCAA----TA-TTG----Gt-----t-taat-a-aaa----g
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  149547 28 +    230217 caatca--ataaa----ta-ctg----gt-----t-tagt-a-aaA----G
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                262752 28 +  18783137 caatca--ataaa----ta-ctg----gt-----t-tagt-a-aaa----g
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4719389 28 -   8748460 caatca--ataaa----ta-ctg----gt-----t-tagt-a-aaa----g
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183440476 28 + 183742232 CAATCA--ATCAA----TA-TTG----gt-----t-taat-a-aaa----g
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             4169 28 +     20448 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20560975 28 +  20919399 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   2913 28 +     41871 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     6199 28 +     27711 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  6278 28 +      9205 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11010 28 -     78924 caatca--attaa----ta-ctg----gt-----t-taat-a-aaa----g
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            7934 28 +     13100 CAATCA--ATAAA----TG-TCA----GC-----T-TCAT-A-AAG----G
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             6312 28 +     25941 caatca--ataaa----tg-tca----gc-----t-tcat-a-aag----g
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18191784 26 -  18517816 TAATGG--ATAAA----TA-TTA----Gc-----t-tgat-a-aa------
i Peromyscus_maniculatus.KI615324.1                      C 0 I 1
s Piliocolobus_badius.k141_1234363                           40946 28 +     62158 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        35675 28 +     89929 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            37091 28 +     51399 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14293329 28 -  14605196 CAATCA--ATCAA----TA-TTG----Gt-----t-taat-a-aaa----g
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189128406 28 + 189387572 CAATAA--ATCAA----TA-TTG----Gt-----t-taat-a-aaa----g
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9568014 28 +   9816681 CAATAA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               70601 28 -     81375 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              2421 28 +     19060 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 10416 28 -     22811 CCATCAATA--AA----TA-TTT----GT-----T-TCAC-A-AAA----C
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2594686 26 -   4620579 CAATCA--ACAAA----CA-TTG----GC-----T-taatga-a-------
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     988677 26 +   2598838 CGATCA--ATAAA----TA-TTG----GC-----t-taatga-a-------
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          26987 26 +     38485 CGATCA--ATAAA----TA-TTG----GC-----T-TAATGA-A-------
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             3147 26 +      4256 cgatca--ataaa----ta-ttg----gc-----t-taatga-a-------
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          24507 26 +     35766 CAATGA--ATAAA----TA-TTG----GC-----T-TAATGA-A-------
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           2690 26 -     24134 CAATGA--ATAAA----TA-TTG----GC-----T-TAATGA-A-------
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        26504 26 -     67325 cgatca--ataaa----ta-ttg----gc-----t-taatga-a-------
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           2740 26 -      6182 CGATCA--ATAAA----TA-TTG----GC-----T-TAATGA-A-------
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             8202 26 -     21651 TAATAG--ataaa----ta-tta----gt-----t-tatt-t-tt------
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            13047 28 -     21811 caatca--ataaa----ta-ctg----gt-----t-taac-c-aaa----g
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         38591 28 +     42204 cactca--ataaa----tg-ctg----gt-----t-taat-a-aaA----G
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22975145 28 +  28871421 caaaca--ataaa----ta-ttg----gt-----t-taat-g-gaa----g
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1358234 28 +   4952924 caagca--ataaa----ta-tta----gt-----t-taat-g-gaa----g
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20272666 28 -  38429054 caatca--ataaa----ta-ctg----gt-----t-tagt-a-aaa----g
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             12436 28 -     91421 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7606562 28 +   7812017 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             12410 28 -     72585 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53568037 26 +  90668790 TAACAG--ATAAA----ta-tta----gt-----t-taat-t-tt------
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             4117 28 -     11128 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91233472 28 - 195417433 CAATCA--ATCAA----TA-TTG----GT-----T-taat-a-aaa----g
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7669121 28 +   7961872 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                86154 28 -     96226 caagca--ataaa----ta-ttg----gt-----t-taat-g-gaa----g
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               5336 28 -      8359 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            11644 28 -     13588 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              5282 28 -      6207 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               11009 28 +     13640 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               5872 28 +      8564 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209466149 28 + 209938924 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 5363 28 -      9399 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 2509 28 +      3421 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119948687 28 - 121099817 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----C
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       21154 20 +     46362 CAATCA--ATCAA----TA-TTG----GT-----T-T--------------
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               21249 20 +     45824 CAATCA--ATCAA----TA-TTG----GT-----T-T--------------
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             37864 28 -     64574 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----C
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                                870 28 -     23631 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----C
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 21142 23 -     61129 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-----------
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          16944 28 -     19888 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      24147 28 +     39453 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            4673 28 +     27826 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             4193 28 -     19483 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      4255 28 +      7198 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         12515 28 +     15514 CAATCA--ATTAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11190 25 -     12148 TAATTA--ACAAA----TA-TTA----GT-----T-TAGT-T-T-------
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 I 1
s Solenodon_paradoxus.SolPar_flattened_line_126               2175 27 +   1910179 gaatca--ataaa----ta-ttt----at-----t-taat-a-aaA-----
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1951249 32 -   3870691 AAATCA--ATTAA----TA-TTG----GT-----T-Taat-g-aaagcaag
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             29108 28 +     97271 caacca--gtaaa----ta-atg----gt-----t-tgat-a-aaA----G
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              16694 24 -    196729 caatca--at--------a-ctt----gt-----t-taat-a-aaa----g
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.JH118708.1                                      33883 28 -     47482 caatta--ataaa----ta-ttg----gt-----t-taat-c-aaa----a
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1090724 28 -   1523678 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 8988 28 +     41958 CAAGCA--ATGAG----TA-TTG----GT-----C-TAAT-G-AAA----G
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 70491 27 +    116680 CAACCA--ATAAC----TT-TTT-----T-----T-TAAT-G-AAA----G
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      117110 28 -    156842 caatca--ataaa----ta-ttg----at-----t-taat-g-aaA----G
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    385563 28 +    539355 caatca--ataaa----ta-ttg----at-----t-taat-g-aaA----G
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               24051 28 +     70052 caatca--ataaa----ta-tca----gt-----t-taat-g-aaA----G
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_2029956                               3396 28 +      4644 caatca--ataaa----ta-tca----gt-----t-taat-g-aaA----G
i Tarsius_wallacei.k141_2029956                          C 0 C 0
s Theropithecus_gelada.CM009954.1                        186425841 28 + 186847797 CAATCA--ATCAA----TA-TTG----gt-----t-taat-a-aaa----g
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   3056 21 +      8208 CGACCA--ATAAA----TA-TTT----GT-----T-TA-------------
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 I 7
s Trachypithecus_auratus.k141_722599                          8246 28 -     20410 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    12440 28 +     15221 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        8347 28 +     19930 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       4776 28 -     19997 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            44896 28 -     60166 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        12368 28 -     27529 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     12310 28 -     18194 CAATCA--ATCAA----TA-TTA----GT-----T-TAAT-A-AAA----G
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           6043 28 -     21137 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    4746 28 -     10723 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         3898 28 +      9834 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        22214 28 +     32220 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5936313 28 +   6242583 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        5561 28 +     20839 CAATCA--ATCAA----TA-TTG----GT-----T-TAAT-A-AAA----G
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2152791 29 +   4065304 AAATCA--ACAAA----TAATTG----gt-----t-taat-g-aaa----g
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     6406 28 -     10553 AAATCA--ACAAA----TA-TTG----GT-----T-TAAT-G-AAA----G
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4848802 28 -   5085361 caatca--ataaa----ta-ctg----gt-----t-taat-a-aaa----g
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   9369 26 +     50397 CAATTA--ATAAA----TA-TTG----GC-----T-TAATGA-A-------
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              9423 26 +     24756 CAATTA--ATAAA----TA-TTG----GC-----T-TAATGA-A-------
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5370269 28 -   5488506 caatta--ataaa----ta-ctg----gc-----t-taat-t-aaa----a
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  9287 28 -     43706 caatca--ataaa----ta-ctg----gt-----t-taat-a-aaA----G
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        22495 32 -     24430 CAATCA--AAAAA----TA-TTG----GT-----T-TAAT-G-AAAGCAAG
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          3519 28 +     86975 caatca--ataaa----ta-ctg----gt-----t-taat-a-aaA----G
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Cebus_unicolor.k141_544048                                 48519  0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188  0 +      1777 C
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383  9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Crocidura_indochinensis.CroInd_scaffold_287352              1624  0 +      4208 I
e Condylura_cristata.JH655891.1                           17547132  5 -  53390261 I
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       4053 3 +     62944 GA----A
s Allenopithecus_nigroviridis.k141_3361533                   11972 3 -     52922 GA----A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         11906 3 -     28001 GA----A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          2352 3 -     18505 GA----A
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           3201 3 -     12518 GA----A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                               805 3 -     27731 GA----A
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                 928 3 +      3134 GA----A
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               1066 3 -     45847 GA----A
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                22270 3 +     25266 GA----A
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           1454 3 +      2906 CA----A
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            15567 3 -     18578 CA----A
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                               954 3 +     47717 GA----A
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             1085 3 -      3544 GA----A
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             12304 3 +     50774 GA----A
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  12927 2 -     33861 GA-----
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            12948 2 -     34016 GA-----
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4295344 2 -   5030052 ga-----
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             12949 2 -     34685 GA-----
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               26070 2 -     47192 GA-----
i Aotus_vociferans.k141_344750                           C 0 C 0
s Arctocebus_calabarensis.k141_2318572                        9321 3 +     14667 AA----A
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Avahi_laniger.k141_765380                                  51649 2 -     92717 -G----G
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              52278 2 +     85213 -G----G
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             2691 2 -     10423 GA-----
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             22191 2 +     31915 GA-----
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            2661 2 +      5267 GA-----
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23587875 2 - 189096842 GA-----
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              9405 2 -     12001 GA-----
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10000797 3 -  17673402 ga----a
i Camelus_bactrianus.KN276810.1                          C 0 I 1
s Camelus_dromedarius.KN272107.1                           2333261 3 -   7040546 ga----a
i Camelus_dromedarius.KN272107.1                         C 0 I 1
s Camelus_ferus.KB017975.1                                  401537 3 -   1652518 ga----a
i Camelus_ferus.KB017975.1                               C 0 I 1
s Carlito_syrichta.NW_007259797.1                           153957 3 -    496798 gt----a
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     91377 3 +    217609 GA----A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 1
s Cebuella_niveiventris.k141_1251222                          7315 2 -     11392 GA-----
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               3413 2 -      7577 GA-----
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         3468 3 +     31688 GT----A
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12229814 3 +  27778364 ga----a
i Ceratotherium_simum.JH767749.1                         C 0 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634            841 3 -     25243 GA----A
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 I 1
s Cercocebus_atys.KQ010504.1                               4472931 3 +   4669795 ga----a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        11478 3 -     19203 GA----A
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           5900 3 +      8260 GA----A
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           6127 3 +     27781 GA----A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         6283 3 -     20310 GA----A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           9262 3 +     29689 GA----A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            3692 3 +      9989 GA----A
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          11941 3 -     27936 GA----A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                             816 3 -     17152 GA----A
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38814346 3 +  39242232 GA----A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21220045 3 -  21565898 GA----A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       37164 3 -     53127 GA----A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        4445 3 +      7159 GA----A
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       11967 3 -     27947 GA----A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         11940 3 +     17596 GA----A
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          1163 3 +     26000 GA----A
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            5893 3 -      6351 AA----A
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       I 3 C 0
s Cheirogaleus_major.k141_333249                             19065 2 -     52598 -G----G
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           14410 2 +     57038 -A----G
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           8339 3 +     11226 GA----A
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18425903 3 -  18827391 GA----A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       12341 3 -     50209 GA----A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135419349 3 + 135778131 ga----a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 16242 3 +     19366 aa----A
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 I 1
s Choloepus_hoffmanni.KN194906.1                            171341 3 +    839153 aa----a
i Choloepus_hoffmanni.KN194906.1                         C 0 I 1
s Chrysochloris_asiatica.ChrAsi_scaffold_172426              10478 3 -     10935 GA----A
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          C 0 I 1
s Colobus_angolensis.KN981557.1                            1907865 3 +   2368649 ga----a
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199947541 3 + 200372422 GA----A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              34403 3 +     84244 GA----A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          12394 3 -     20389 GA----A
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 1
s Dasypus_novemcinctus.JH564415.1                            62218 3 +   2246927 aa----a
i Dasypus_novemcinctus.JH564415.1                        I 3 I 1
s Daubentonia_madagascariensis.ctg71                      12535271 3 -  12879189 AA----G
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  671666 3 +   1390856 ga----a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 1
s Diceros_bicornis.DicBicMic_scaffold_5955                    4422 3 +    198055 GA----A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 1
s Eidolon_helvum.KE759718.1                                   8914 3 +     11740 ga----a
i Eidolon_helvum.KE759718.1                              C 0 I 1
s Elephantulus_edwardii.JH947257.1                         1089449 3 +  10337057 aa----a
i Elephantulus_edwardii.JH947257.1                       I 9 I 1
s Equus_asinus.JREZ01000139.1                              1281721 3 +   4378816 ga----a
i Equus_asinus.JREZ01000139.1                            C 0 I 1
s Equus_caballus.CM000403.2                               18529542 3 -  39960074 ga----a
i Equus_caballus.CM000403.2                              C 0 I 1
s Equus_przewalskii.KK951119.1                               31557 3 +    498745 ga----a
i Equus_przewalskii.KK951119.1                           C 0 I 1
s Erythrocebus_patas.Contig38                             21202539 3 -  21539334 GA----A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              11757 2 -     14127 -G----G
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                4455 2 -     16928 -G----G
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              13492 2 -     25546 -G----G
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            10682 2 +     26330 -G----G
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 11921 2 +     23973 -G----G
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                10682 2 +     75513 -G----G
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  8624 2 +     97555 -G----G
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            11560 2 +     26496 -G----G
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  2157 2 -     17153 -G----G
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              11733 2 +    111500 -G----G
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Galago_moholi.ctg2040                                     424292 3 -    453645 aa----A
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             1999 3 +     11339 AA----A
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1959596                            5806 3 +      6795 AA----A
i Galagoides_demidoff.k141_1959596                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_197845               2023 3 -      3123 GA----A
i Galeopterus_variegatus.GalVar_scaffold_197845          I 28 I 1
s Gorilla_beringei.k141_3596273                              13306 3 -     32273 GA----A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186335454 3 + 186649187 ga----a
i Gorilla_gorilla.LT578341.1                             I 28 C 0
s Hapalemur_alaotrensis.k141_170648                           4811 2 -     19426 -G----G
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              9960 2 -     15286 -G----G
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             11599 2 +     18253 -G----G
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         11700 2 -     41752 -G----G
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         11538 2 -     16460 -G----G
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 695 3 +       961 AA----A
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 I 1
s Hipposideros_armiger.JXIK01000431.1                       110199 3 +   1711038 ga----a
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 1
s Hipposideros_galeritus.HipGal_scaffold_29171               41622 3 +     43066 GA----A
i Hipposideros_galeritus.HipGal_scaffold_29171           I 28 I 1
s Hoolock_leuconedys.ctg274                                    432117 3 +    630532 GA----A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_307679                               15054 3 -     15490 GA----A
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              57060 3 +     67168 GA----A
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189540710 3 - 191637585 GA----A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3333604 3 -  11177569 GA----A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_3655594                                   20505 2 +     31101 -G----G
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15522062 2 -  30322482 -G----G
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        5056 2 +     64341 GA-----
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           2116 2 +      4941 GA-----
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4984 2 +     35603 GA-----
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    26455 2 +     38576 GA-----
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         23152 2 +     66356 GA-----
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          8943 2 -     23766 -G----G
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             26890 2 +     45836 -G----G
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_320948                          1114 2 -      1719 -G----G
i Lepilemur_ruficaudatus.k141_320948                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      24945 2 +     54090 -G----G
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     3945 3 -     14121 AA----A
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 1
s Lophocebus_aterrimus.ctg367                              1434476 3 +   1826925 GA----A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            3749 3 +     11245 AA----A
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1002587 3 +   6120653 AA----A
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214980 3 -  43346337 aa----a
i Loxodonta_africana.GL010049.1                          C 0 I 1
s Macaca_arctoides.k141_2326796                               4289 3 +     40492 GA----A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59673551 3 +  60120075 GA----A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 10045 3 -     26193 GA----A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            77849 3 -    114318 GA----A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  3548 3 -     23192 GA----A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                13008 3 -     29190 GA----A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  21576 3 +     37952 GA----A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186836664 3 + 187317192 ga----a
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25455227 3 -  25927173 ga----a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  77425 3 +     89720 GA----A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 4422 3 +     20474 GA----A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   4224 3 -     14993 GA----A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  327094 3 -    668171 GA----A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 2534 3 -     24072 GA----A
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               23163 3 -     45290 GA----A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88988 3 +     94391 GA----A
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 1
s Mandrillus_leucophaeus.scaffold280                      23934750 3 -  24302211 GA----A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               348883 3 +    752769 GA----A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         8731 3 -    207569 GA----A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 1
s Mico_argentatus.k141_1239457                                3237 2 -      7380 GA-----
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               2303 2 +     18990 GA-----
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      3242 2 -      7356 GA-----
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18289449 2 -  93316391 -g----g
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    17539 3 -    145209 AA----A
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 1
s Miopithecus_ogouensis.k141_534055                           6470 3 -     28506 GA----A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirza_zaza.k141_952172                                      7022 2 -     37649 -G----G
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 139684 3 -    366855 GG----A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 1
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187164 3 +    196477 CA----A
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 I 1
s Nasalis_larvatus.k141_413338                               12466 3 +     21681 GA----A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nycticebus_bengalensis.LG01                            102577510 3 - 196305487 AA----A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             5196 3 +      8486 AA----A
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105747937 3 + 199412804 AA----A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1361028 3 +   3988456 GA----g
i Ochotona_princeps.JH802162.1                           C 0 I 1
s Orycteropus_afer.OryAfe_flattened_line_144387               7500 3 -     18566 GA----A
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 I 1
s Oryctolagus_cuniculus.CM000791.1                        67144790 3 + 174332312 GA----A
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 1
s Otolemur_crassicaudatus.k141_222918                         1834 3 +      8798 AA----A
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             694001 3 -   1103335 aa----a
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    41403 3 +     80009 ga----a
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189140315 3 + 189151597 ga----a
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                183440504 3 + 183742232 ga----a
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             4197 3 +     20448 GA----A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20561003 3 +  20919399 GA----A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   2941 3 +     41871 GA----A
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     6227 3 +     27711 GA----A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  6306 3 +      9205 GA----A
i Papio_ursinus.k141_3428135                             C 0 C 0
s Perodicticus_ibeanus.k141_855320                            7962 3 +     13100 AA----A
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             6340 3 +     25941 aa----A
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Piliocolobus_badius.k141_1234363                           40974 3 +     62158 GA----A
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        35703 3 +     89929 GA----A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            37119 3 +     51399 GA----A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14293357 3 -  14605196 ga----a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189128434 3 + 189387572 ga----a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9568042 3 +   9816681 GA----A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               70629 3 -     81375 GA----A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              2449 3 +     19060 GA----A
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 10444 3 -     22811 AA----A
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 I 1
s Prolemur_simus.MPIZ01000396.1                            2594712 2 -   4620579 -g----g
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     988703 2 +   2598838 -g----g
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          27013 2 +     38485 -G----G
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             3173 2 +      4256 -G----G
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          24533 2 +     35766 -G----G
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           2716 2 -     24134 -G----G
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        26530 2 -     67325 -G----G
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           2766 2 -      6182 -G----G
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            13075 3 -     21811 aa----a
i Pteronotus_parnellii.KE909381.1                        C 0 I 1
s Pteropus_alecto.KB030862.1                              22975173 3 +  28871421 ga----a
i Pteropus_alecto.KB030862.1                             C 0 I 1
s Pteropus_vampyrus.KN525825.1                             1358262 3 +   4952924 ga----a
i Pteropus_vampyrus.KN525825.1                           C 0 I 1
s Pygathrix_cinerea.k141_1153803                             12464 3 -     91421 GA----A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7606590 3 +   7812017 GA----A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             12438 3 -     72585 GA----A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             4145 3 -     11128 GA----A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91233500 3 - 195417433 gc----a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7669149 3 +   7961872 GA----A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                86182 7 -     96226 aaACAAA
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 1
s Saguinus_bicolor.k141_2619299                               5364 2 -      8359 GA-----
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            11672 2 -     13588 GA-----
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              5310 2 -      6207 GA-----
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               11037 2 +     13640 GA-----
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               5900 2 +      8564 GA-----
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209466177 2 + 209938924 GA-----
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 5391 2 -      9399 GA-----
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 2537 2 +      3421 GA-----
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119948715 2 - 121099817 GA-----
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_oerstedii.k141_1487881                             37892 2 -     64574 GA-----
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                                898 2 -     23631 GA-----
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Semnopithecus_entellus.k141_11662                          16972 3 -     19888 GA----A
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      24175 3 +     39453 GA----A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            4701 3 +     27826 GA----A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             4221 3 -     19483 GA----A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      4283 3 +      7198 GA----A
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         12543 3 +     15514 GA----A
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               2202 1 +   1910179 ------A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 1
s Sus_scrofa.JH118708.1                                      33911 3 -     47482 ga----a
i Sus_scrofa.JH118708.1                                  C 0 I 1
s Symphalangus_syndactylus.tarseq_199                      1090752 3 -   1523678 GA----A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 9016 3 +     41958 GG----A
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 1
s Tamandua_tetradactyla.TamTet_scaffold_1782                 70518 3 +    116680 AA----A
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 I 1
s Tapirus_indicus.TapInd_scaffold_9301                      117138 3 -    156842 GA----A
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 1
s Tapirus_terrestris.TapTer_scaffold_755                    385591 3 +    539355 GA----A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 1
s Tarsius_lariang.k141_2201908                               24079 3 +     70052 GT----A
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_2029956                               3424 3 +      4644 GT----A
i Tarsius_wallacei.k141_2029956                          C 0 C 0
s Theropithecus_gelada.CM009954.1                        186425869 3 + 186847797 ga----a
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   3084 3 +      8208 AA----A
i Tolypeutes_matacus.TolMat_scaffold_228639              I 7 I 1
s Trachypithecus_auratus.k141_722599                          8274 3 -     20410 GA----A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    12468 3 +     15221 GA----A
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        8375 3 +     19930 GA----A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       4804 3 -     19997 GA----A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            44924 3 -     60166 GA----A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        12396 3 -     27529 GA----A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     12338 3 -     18194 GA----A
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           6071 3 -     21137 GA----A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    4774 3 -     10723 GA----A
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         3926 3 +      9834 GA----A
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        22242 3 +     32220 GA----A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5936341 3 +   6242583 GA----A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        5589 3 +     20839 GA----A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2152820 3 +   4065304 aa----a
i Tupaia_chinensis.KB320699.1                            C 0 I 289
s Tupaia_tana.TupTan_flattened_line_97126                     6434 3 -     10553 AA----A
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 294
s Varecia_rubra.k141_590885                                   9395 2 +     50397 -G----G
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              9449 2 +     24756 -G----G
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5370297 3 -   5488506 ga----a
i Vicugna_pacos.KN270157.1                               C 0 I 1
e Sapajus_macrocephalus.k141_351809                          54316 0 -     80660 C
e Sapajus_apella.ctg103                                    5419275 0 -   5703754 C
e Saimiri_ustus.k141_1484609                                 21165 0 -     61129 C
e Saimiri_macrodon.k141_716185                               21269 0 +     45824 C
e Saimiri_cassiquiarensis.k141_2188234                       21174 0 +     46362 C
e Cebus_unicolor.k141_544048                                 48519 0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188 0 +      1777 C
e Cebus_albifrons.Contig27                                25650611 0 +  26074798 C
e Mus_pahari.LT608297.1                                   31352648 0 -  89631738 C
e Mus_spretus.CM004101.1                                  90750058 0 - 130317789 C
e Mus_musculus.chr8                                       87647980 0 - 129401213 C
e Mus_caroli.LT608237.1                                   84358996 0 - 120012414 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_17732          3547 0 +     86975 C
e Xerus_inauris.XerIna_scaffold_48378                        22527 0 -     24430 C
e Vulpes_lagopus.VulLag_flattened_line_30954                  9315 0 -     43706 C
e Ursus_maritimus.KK499267.1                               4848830 0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383 9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553 7 +    610378 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937 0 +    114563 C
e Suricata_suricatta.SurSur_flattened_line_6629              16718 0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             29136 0 +     97271 C
e Spermophilus_dauricus.KZ294078.1                         1951281 0 -   3870691 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11215 1 -     12148 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rattus_norvegicus.chr16                                 53568063 0 +  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20272694 0 -  38429054 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         38619 0 +     42204 C
e Psammomys_obesus.NESX01036370.1                             8228 0 -     21651 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823 1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813 0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18191810 1 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11038 0 -     78924 C
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4719417 0 -   8748460 C
e Panthera_pardus.KV860321.1                                262780 0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  149575 0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       460661 0 -    559221 C
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    77211 0 +    102263 C
e Ondatra_zibethicus.OndZib_scaffold_46174                   22133 1 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              505053 0 -   2017862 C
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Nyctereutes_procyonoides.CAJHUB010000658.1               9147905 0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805 0 +       996 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016 1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456 1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390 1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692 1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               299607 0 -  14710649 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           5520 1 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   33824 0 +     37127 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         3903 0 -      8324 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686 0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11258017 542 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009 7 -     19307 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12180378 1 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 30586 0 +    140813 C
e Mellivora_capensis.MelCap_flattened_line_69365              8428 0 +     13704 C
e Marmota_marmota.CZRN01000018.1                          33100393 0 -  40650429 C
e Manis_pentadactyla.KN006162.1                              49223 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              17837 0 +    737560 C
e Lycaon_pictus.CM007581.1                                17953647 0 -  59628241 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Leptonychotes_weddellii.APMU01168965.1                       489 0 -      1094 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Ictidomys_tridecemlineatus.JH393364.1                    7518085 0 -   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547 0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  42848 0 +     55795 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               240717 0 +    327341 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  7923 0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20194409 0 + 205367284 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447 1 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16327709 0 -  41312741 C
e Ellobius_talpinus.LOJH01109367.1                            3560 1 -      6299 I
e Ellobius_lutescens.LOEQ01008920.1                          17507 1 -    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084 0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495 7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    835135 0 +   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129             26872 0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_287352              1624 0 +      4208 I
e Cricetulus_griseus.LT883664.1                           11665318 1 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 47983 0 +     63868 C
e Condylura_cristata.JH655891.1                           17547132 5 -  53390261 I
e Chinchilla_lanigera.JH722012.1                           1251498 0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157 0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    136057 4 +    179628 I
e Carollia_perspicillata.CarPer_scaffold_92756                3465 7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18498745 0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17957407 0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9033142 0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    183756 0 -    185531 C
e CanFam4.chr16                                           17797699 0 -  60362399 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102 7 +     43469 I
e Aplodontia_rufa.AprRuf_scaffold_68852                       9943 0 +     20879 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691 7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     71945 5 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             77741 0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9508952 0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     68283 0 +     87051 C
e Acinonyx_jubatus.LLWD01001279.1                           825695 0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       4056 2 +     62944 G-A
s Acinonyx_jubatus.LLWD01001279.1                           825695 2 -   1699592 g-a
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9508952 2 -  29979442 g-a
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             77741 2 -    347723 g-a
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   11975 2 -     52922 G-A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         11909 2 -     28001 G-A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          2355 2 -     18505 G-A
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           3204 2 -     12518 G-A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                               808 2 -     27731 A-A
i Alouatta_belzebul.k141_3238538                         C 0 I 1
s Alouatta_caraya.k141_1743867                                 931 2 +      3134 A-A
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               1069 2 -     45847 A-A
i Alouatta_discolor.k141_743489                          C 0 I 1
s Alouatta_juara.k141_1509701                                22273 2 +     25266 A-A
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           1457 2 +      2906 A-A
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            15570 2 -     18578 A-A
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                               957 2 +     47717 A-A
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             1088 2 -      3544 A-A
i Alouatta_puruensis.k141_1253230                        C 0 I 2
s Alouatta_seniculus.k141_117119                             12307 2 +     50774 A-A
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  12929 3 -     33861 AAA
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            12950 2 -     34016 A-A
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4295346 3 -   5030052 aaa
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             12951 3 -     34685 AAA
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               26072 3 -     47192 AAA
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       9943 1 +     20879 --A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                        9324 2 +     14667 G-A
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Avahi_laniger.k141_765380                                  51651 2 -     92717 G-A
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              52280 2 +     85213 G-A
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             2693 2 -     10423 A-A
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             22193 2 +     31915 A-A
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            2663 2 +      5267 A-A
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23587877 2 - 189096842 A-A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              9407 2 -     12001 A-A
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10000801 2 -  17673402 g-a
i Camelus_bactrianus.KN276810.1                          I 1 C 0
s Camelus_dromedarius.KN272107.1                           2333265 2 -   7040546 g-a
i Camelus_dromedarius.KN272107.1                         I 1 C 0
s Camelus_ferus.KB017975.1                                  401541 2 -   1652518 g-a
i Camelus_ferus.KB017975.1                               I 1 C 0
s CanFam4.chr16                                           17797699 2 -  60362399 G-A
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    183756 2 -    185531 G-A
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9033142 2 -   9314153 g-a
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17957407 2 -  59632846 g-a
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18498745 2 +  63665305 g-a
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           153960 2 -    496798 g-a
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     91381 2 +    217609 G-A
i Catagonus_wagneri.CatWag_scaffold_2839                 I 1 C 0
s Cebuella_niveiventris.k141_1251222                          7317 2 -     11392 A-A
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               3415 2 -      7577 A-A
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         3471 2 +     31688 G-A
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12229818 2 +  27778364 g-a
i Ceratotherium_simum.JH767749.1                         I 1 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634            845 2 -     25243 G-A
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 1 C 0
s Cercocebus_atys.KQ010504.1                               4472934 2 +   4669795 g-a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        11481 2 -     19203 G-A
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           5903 2 +      8260 G-A
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           6130 2 +     27781 G-A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         6286 2 -     20310 G-A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           9265 2 +     29689 G-A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            3695 2 +      9989 G-A
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          11944 2 -     27936 G-A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                             819 2 -     17152 G-A
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38814349 2 +  39242232 G-A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21220048 2 -  21565898 G-A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       37167 2 -     53127 G-A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        4448 2 +      7159 G-A
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       11970 2 -     27947 G-A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         11943 2 +     17596 G-A
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          1166 2 +     26000 G-A
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             19067 2 -     52598 G-A
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           14412 2 +     57038 G-A
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           8342 2 +     11226 A-A
i Chiropotes_albinasus.k141_2813271                      C 0 I 3
s Chlorocebus_aethiops.ctg25                              18425906 2 -  18827391 G-A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       12344 2 -     50209 G-A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135419352 2 + 135778131 g-a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 16246 2 +     19366 G-A
i Choloepus_didactylus.ChoDid_scaffold_45914             I 1 C 0
s Choloepus_hoffmanni.KN194906.1                            171345 2 +    839153 g-a
i Choloepus_hoffmanni.KN194906.1                         I 1 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_172426              10482 2 -     10935 A-A
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          I 1 C 0
s Colobus_angolensis.KN981557.1                            1907868 2 +   2368649 g-a
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199947544 2 + 200372422 G-A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              34406 2 +     84244 G-A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             26872 2 -     87169 a-a
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    835135 1 +   1526836 --A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            62222 2 +   2246927 G-A
i Dasypus_novemcinctus.JH564415.1                        I 1 C 0
s Daubentonia_madagascariensis.ctg71                      12535274 2 -  12879189 G-A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  671670 2 +   1390856 g-a
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 1 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    4426 2 +    198055 G-A
i Diceros_bicornis.DicBicMic_scaffold_5955               I 1 C 0
s Eidolon_helvum.KE759718.1                                   8918 2 +     11740 a-a
i Eidolon_helvum.KE759718.1                              I 1 C 0
s Elephantulus_edwardii.JH947257.1                         1089453 2 +  10337057 g-a
i Elephantulus_edwardii.JH947257.1                       I 1 C 0
s Enhydra_lutris.KZ291758.1                               16327709 2 -  41312741 g-a
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1281725 2 +   4378816 g-a
i Equus_asinus.JREZ01000139.1                            I 1 C 0
s Equus_caballus.CM000403.2                               18529546 2 -  39960074 g-a
i Equus_caballus.CM000403.2                              I 1 C 0
s Equus_przewalskii.KK951119.1                               31561 2 +    498745 g-a
i Equus_przewalskii.KK951119.1                           I 1 C 0
s Erythrocebus_patas.Contig38                             21202542 2 -  21539334 G-A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              11759 2 -     14127 C-A
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                4457 2 -     16928 C-A
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              13494 2 -     25546 C-A
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            10684 2 +     26330 C-A
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 11923 2 +     23973 C-A
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                10684 2 +     75513 C-A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  8626 2 +     97555 C-A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            11562 2 +     26496 C-A
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  2159 2 -     17153 C-A
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              11735 2 +    111500 C-A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20235566 2 + 206538554 g-a
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20194409 2 + 205367284 g-a
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  7923 2 -     36744 G-A
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     424295 2 -    453645 G-A
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             2002 2 +     11339 G-A
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1959596                            5809 2 +      6795 G-A
i Galagoides_demidoff.k141_1959596                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_197845               2027 2 -      3123 G-A
i Galeopterus_variegatus.GalVar_scaffold_197845          I 1 C 0
s Gorilla_beringei.k141_3596273                              13309 2 -     32273 G-A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186335457 2 + 186649187 g-a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           4813 2 -     19426 G-A
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              9962 2 -     15286 G-A
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             11601 2 +     18253 G-A
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         11702 2 -     41752 G-A
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         11540 2 -     16460 G-A
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               240717 2 +    327341 A-A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 699 2 +       961 G-A
i Heterohyrax_brucei.HetBruBak_scaffold_383740           I 1 C 0
s Hoolock_leuconedys.ctg274                                    432120 2 +    630532 G-A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  42848 2 +     55795 a-T
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_307679                               15057 2 -     15490 G-A
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              57063 2 +     67168 G-A
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189540713 2 - 191637585 G-A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3333607 2 -  11177569 G-A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7518085 1 -   7955117 --a
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 1
s Indri_indri.k141_3655594                                   20507 2 +     31101 G-A
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15522064 2 -  30322482 G-A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        5058 2 +     64341 A-A
i Leontocebus_fuscicollis.k141_1820339                   C 0 I 2
s Leontocebus_illigeri.k141_3350179                           2118 2 +      4941 A-A
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4986 2 +     35603 A-A
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    26457 2 +     38576 A-A
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         23154 2 +     66356 A-A
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          8945 2 -     23766 G-A
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             26892 2 +     45836 G-A
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_320948                          1116 2 -      1719 G-A
i Lepilemur_ruficaudatus.k141_320948                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      24947 2 +     54090 G-A
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.APMU01168965.1                       489 2 -      1094 g-a
i Leptonychotes_weddellii.APMU01168965.1                 C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     3949 2 -     14121 C-A
i Lepus_americanus.LepAme_scaffold_107385                I 1 C 0
s Lophocebus_aterrimus.ctg367                              1434479 2 +   1826925 G-A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            3752 2 +     11245 G-A
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1002590 2 +   6120653 G-A
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214984 2 -  43346337 g-a
i Loxodonta_africana.GL010049.1                          I 1 C 0
s Lycaon_pictus.CM007581.1                                17953647 2 -  59628241 g-a
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               4292 2 +     40492 G-A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59673554 2 +  60120075 G-A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 10048 2 -     26193 G-A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            77852 2 -    114318 G-A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  3551 2 -     23192 G-A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                13011 2 -     29190 G-A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  21579 2 +     37952 G-A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186836667 2 + 187317192 g-a
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25455230 2 -  25927173 g-a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  77428 2 +     89720 G-A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 4425 2 +     20474 G-A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   4227 2 -     14993 G-A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  327097 2 -    668171 G-A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 2537 2 -     24072 G-A
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               23166 2 -     45290 G-A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88992 2 +     94391 A-A
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 1 C 0
s Mandrillus_leucophaeus.scaffold280                      23934753 2 -  24302211 G-A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               348886 2 +    752769 G-A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33100393 1 -  40650429 --a
i Marmota_marmota.CZRN01000018.1                         C 0 I 1
s Mellivora_capensis.MelCap_flattened_line_69365              8428 2 +     13704 G-A
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mico_argentatus.k141_1239457                                3239 2 -      7380 A-A
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               2305 2 +     18990 A-A
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      3244 2 -      7356 A-A
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18289451 2 -  93316391 g-a
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    17543 2 -    145209 G-A
i Microgale_talazaci.MicTal_scaffold_6613                I 1 I 1
s Miopithecus_ogouensis.k141_534055                           6473 2 -     28506 G-A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         3903 2 -      8324 G-A
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      7024 2 -     37649 G-A
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 139688 2 -    366855 G-C
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 1 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   33824 2 +     37127 A-A
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Mustela_putorius.JH418006.1                               299607 2 -  14710649 g-a
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187168 2 +    196477 G-A
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 1 C 0
s Nasalis_larvatus.k141_413338                               12469 2 +     21681 G-A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9147905 2 -   9404916 g-a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102577513 2 - 196305487 G-A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             5199 2 +      8486 G-A
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105747940 2 + 199412804 G-A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1361032 2 +   3988456 g-c
i Ochotona_princeps.JH802162.1                           I 1 C 0
s Odobenus_rosmarus.KB229312.1                              505053 2 -   2017862 g-a
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               7504 2 -     18566 G-A
i Orycteropus_afer.OryAfe_flattened_line_144387          I 1 I 39
s Oryctolagus_cuniculus.CM000791.1                        67144794 2 + 174332312 C-A
i Oryctolagus_cuniculus.CM000791.1                       I 1 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       460661 2 -    559221 g-a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         1837 2 +      8798 G-A
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Pan_paniscus.KQ411613.1                                    41406 2 +     80009 g-a
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189140318 2 + 189151597 g-a
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  149575 2 +    230217 G-A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                262780 2 +  18783137 g-a
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4719417 2 -   8748460 g-a
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183440507 2 + 183742232 g-a
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             4200 2 +     20448 G-A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20561006 2 +  20919399 G-A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   2944 2 +     41871 G-A
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     6230 2 +     27711 G-A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  6309 2 +      9205 G-A
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11038 2 -     78924 a-a
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            7965 2 +     13100 A-A
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             6343 2 +     25941 A-A
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Piliocolobus_badius.k141_1234363                           40977 2 +     62158 G-A
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        35706 2 +     89929 G-A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            37122 2 +     51399 G-A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14293360 2 -  14605196 g-a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189128437 2 + 189387572 g-a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9568045 2 +   9816681 G-A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               70632 2 -     81375 G-A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              2452 2 +     19060 G-A
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 10448 2 -     22811 G-A
i Procavia_capensis.ProCapCap_scaffold_85530             I 1 C 0
s Prolemur_simus.MPIZ01000396.1                            2594714 2 -   4620579 g-a
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     988705 2 +   2598838 g-a
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          27015 2 +     38485 G-A
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             3175 2 +      4256 G-A
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          24535 2 +     35766 G-A
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           2718 2 -     24134 G-A
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        26532 2 -     67325 G-A
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           2768 2 -      6182 G-A
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            13079 2 -     21811 g-a
i Pteronotus_parnellii.KE909381.1                        I 1 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         38619 2 +     42204 G-A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22975177 2 +  28871421 a-a
i Pteropus_alecto.KB030862.1                             I 1 C 0
s Pteropus_vampyrus.KN525825.1                             1358266 2 +   4952924 a-a
i Pteropus_vampyrus.KN525825.1                           I 1 C 0
s Puma_concolor.QAVW01001104.1                            20272694 2 -  38429054 g-a
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             12467 2 -     91421 G-A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7606593 2 +   7812017 G-A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             12441 2 -     72585 G-A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             4148 2 -     11128 G-A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91233503 2 - 195417433 g-a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7669152 2 +   7961872 G-A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                86190 2 -     96226 A-A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 1 C 0
s Saguinus_bicolor.k141_2619299                               5366 2 -      8359 A-A
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            11674 2 -     13588 A-A
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              5312 2 -      6207 A-A
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               11039 2 +     13640 A-A
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               5902 2 +      8564 A-A
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209466179 2 + 209938924 A-A
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 5393 2 -      9399 A-A
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 2539 2 +      3421 A-A
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119948717 1 - 121099817 --A
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_oerstedii.k141_1487881                             37894 1 -     64574 --A
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                                900 1 -     23631 --A
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Semnopithecus_entellus.k141_11662                          16975 2 -     19888 G-A
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      24178 2 +     39453 G-A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            4704 2 +     27826 G-A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             4224 2 -     19483 G-A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      4286 2 +      7198 G-A
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         12546 2 +     15514 G-A
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               2204 2 +   1910179 G-A
i Solenodon_paradoxus.SolPar_flattened_line_126          I 1 C 0
s Spermophilus_dauricus.KZ294078.1                         1951281 1 -   3870691 --a
i Spermophilus_dauricus.KZ294078.1                       C 0 I 1
s Spilogale_gracilis.SpiGra_flattened_line_13525             29136 2 +     97271 G-A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              16718 2 -    196729 a-a
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.JH118708.1                                      33915 2 -     47482 g-a
i Sus_scrofa.JH118708.1                                  I 1 C 0
s Symphalangus_syndactylus.tarseq_199                      1090755 2 -   1523678 G-A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 70522 2 +    116680 G-A
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 1 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      117142 2 -    156842 G-A
i Tapirus_indicus.TapInd_scaffold_9301                   I 1 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    385595 2 +    539355 G-A
i Tapirus_terrestris.TapTer_scaffold_755                 I 1 C 0
s Tarsius_lariang.k141_2201908                               24082 2 +     70052 G-A
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_2029956                               3427 2 +      4644 G-A
i Tarsius_wallacei.k141_2029956                          C 0 C 0
s Theropithecus_gelada.CM009954.1                        186425872 2 + 186847797 g-a
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   3088 2 +      8208 G-A
i Tolypeutes_matacus.TolMat_scaffold_228639              I 1 C 0
s Trachypithecus_auratus.k141_722599                          8277 2 -     20410 G-A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    12471 2 +     15221 G-A
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        8378 2 +     19930 G-A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       4807 2 -     19997 G-A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            44927 2 -     60166 G-A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        12399 2 -     27529 G-A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     12341 2 -     18194 G-A
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           6074 2 -     21137 G-A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    4777 2 -     10723 G-A
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         3929 2 +      9834 G-A
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        22245 2 +     32220 G-A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5936344 2 +   6242583 G-A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        5592 2 +     20839 G-A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2153112 2 +   4065304 g-a
i Tupaia_chinensis.KB320699.1                            I 289 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     6731 2 -     10553 G-A
i Tupaia_tana.TupTan_flattened_line_97126                I 294 C 0
s Ursus_maritimus.KK499267.1                               4848830 2 -   5085361 g-a
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   9397 2 +     50397 G-A
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              9451 2 +     24756 G-A
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5370301 2 -   5488506 g-a
i Vicugna_pacos.KN270157.1                               I 1 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  9315 2 -     43706 G-A
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        22527 1 -     24430 --A
i Xerus_inauris.XerIna_scaffold_48378                    C 0 I 1
s Zalophus_californianus.ZalCal_flattened_line_17732          3547 2 +     86975 G-A
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Otolemur_garnettii.GL873799.1                             694004 0 -   1103335 C
e Sapajus_macrocephalus.k141_351809                          54316 0 -     80660 C
e Sapajus_apella.ctg103                                    5419275 0 -   5703754 C
e Saimiri_ustus.k141_1484609                                 21165 0 -     61129 C
e Saimiri_macrodon.k141_716185                               21269 0 +     45824 C
e Saimiri_cassiquiarensis.k141_2188234                       21174 0 +     46362 C
e Cebus_unicolor.k141_544048                                 48519 0 -     74725 C
e Cebus_olivaceus.k141_398305                                  188 0 +      1777 C
e Cebus_albifrons.Contig27                                25650611 0 +  26074798 C
e Mus_pahari.LT608297.1                                   31352648 0 -  89631738 C
e Mus_spretus.CM004101.1                                  90750058 0 - 130317789 C
e Mus_musculus.chr8                                       87647980 0 - 129401213 C
e Mus_caroli.LT608237.1                                   84358996 0 - 120012414 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383 9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553 7 +    610378 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937 0 +    114563 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                 9019 1 +     41958 I
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11215 1 -     12148 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rattus_norvegicus.chr16                                 53568063 0 +  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Psammomys_obesus.NESX01036370.1                             8228 0 -     21651 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823 1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813 0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18191810 1 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    77211 0 +    102263 C
e Ondatra_zibethicus.OndZib_scaffold_46174                   22133 1 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805 0 +       996 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016 1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456 1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390 1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692 1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           5520 1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686 0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11258017 542 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009 7 -     19307 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12180378 1 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 30586 0 +    140813 C
e Megaderma_lyra.MegLyr_scaffold_4542                         8734 1 -    207569 I
e Manis_pentadactyla.KN006162.1                              49223 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              17837 0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547 0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_29171               41625 1 +     43066 I
e Hipposideros_armiger.JXIK01000431.1                       110202 1 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447 1 -  14770903 I
e Ellobius_talpinus.LOJH01109367.1                            3560 1 -      6299 I
e Ellobius_lutescens.LOEQ01008920.1                          17507 1 -    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084 0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495 7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Crocidura_indochinensis.CroInd_scaffold_287352              1624 0 +      4208 I
e Cricetulus_griseus.LT883664.1                           11665318 1 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 47983 0 +     63868 C
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          12397 1 -     20389 I
e Condylura_cristata.JH655891.1                           17547132 5 -  53390261 I
e Chinchilla_lanigera.JH722012.1                           1251498 0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            5896 0 -      6351 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157 0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    136057 4 +    179628 I
e Carollia_perspicillata.CarPer_scaffold_92756                3465 7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102 7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691 7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     71945 5 -     89534 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     68283 0 +     87051 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       4058 50 +     62944 A-A-A-A-ATTTC---------------TAATAGGAGCTGTA-ATTAAT---TCCTTTGCTCTA-AGCAGAAGC
s Acinonyx_jubatus.LLWD01001279.1                           825697 46 -   1699592 a-g-a-a-atttc---------------tgATGGGAAC-----CCTAAC---ATCTTAGCTCTA-AGCAGAAGC
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     68283 34 +     87051 ----G-A-AAATC---------------CAATAGGAAA-----GGTAAC---GTCTTA--------GCAGA---
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9508954 46 -  29979442 a-g-a-a-atctc---------------TGATCAGAAC-----AGTAAT---GTCTTAGCTCTA-AGCAGAAGC
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             77743 46 -    347723 a-g-a-a-atctc---------------TGATCGGAAC-----AGTAAT---GGCTTAGCTCTA-AGCAGAAGC
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     71950 47 -     89534 AAG-A-A-AATTA---------------TAATGAGAAT-----GGGAAT---GTCTTAGTGCTA-AACATAAGT
i Allactaga_bullata.AllBul_scaffold_9566                 I 5 C 0
s Allenopithecus_nigroviridis.k141_3361533                   11977 49 -     52922 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         11911 49 -     28001 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          2357 49 -     18505 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           3206 49 -     12518 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                               811 46 -     27731 ----A-A---TTC---------------TAATAGAAGCTTTA-ATTAAT---GCCTTTGCTGTA-AGCAGAAGC
i Alouatta_belzebul.k141_3238538                         I 1 C 0
s Alouatta_caraya.k141_1743867                                 933 49 +      3134 AAA-A-A---TTC---------------TAATAGAAGCTTTA-ATTAAT---GCCTTTGCTGTA-AGCAGAAGC
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               1072 46 -     45847 ----A-A---TTC---------------TAATAGAAGCTTTA-ATTAAT---GCCTTTGCTGTA-AGCAGAAGC
i Alouatta_discolor.k141_743489                          I 1 C 0
s Alouatta_juara.k141_1509701                                22275 48 +     25266 A-A-A-A---TTC---------------TAATAGAAGCTTTA-ATTAAT---GCCTTTGCTGTA-AGCAGAAGC
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           1459 48 +      2906 A-A-A-A---TTC---------------TAATAGAAGCTTTA-ATTAAT---GCCTTTGCTGTA-AGCAGAAGC
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            15572 48 -     18578 A-A-A-A---TTC---------------TAATAGAAGCTTTA-ATTAAT---GCCTTTGCTGTA-AGCAGAAGC
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                               959 48 +     47717 A-A-A-A---TTC---------------TAATAGAAGCTTTA-ATTAAT---GCCTTTGCTGTA-AGCAGAAGC
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             1092 45 -      3544 ------A---TTC---------------TAATAGAAGCTTTA-ATTAAT---GCCTTTGCTGTA-AGCAGAAGC
i Alouatta_puruensis.k141_1253230                        I 2 C 0
s Alouatta_seniculus.k141_117119                             12309 48 +     50774 A-A-A-A---TTC---------------TAATAGAAGCTTTA-ATTAAT---GCCTTTGCTGTA-AGCAGAAGC
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  12932 48 -     33861 A-A-A-A---TTC---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGATCTA-AGCAGAAGC
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            12952 48 -     34016 A-A-A-A---TTC---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4295349 48 -   5030052 a-a-a-a---ttc---------------taatagaaGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             12954 48 -     34685 A-A-A-A---TTC---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               26075 48 -     47192 A-A-A-A---TTC---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       9944 46 +     20879 A-G-A-A-AATTC---------------TAATCAGAAG-----GATTAT---GCCTTTGCTCTA-GGCAAAAGT
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                        9326 46 +     14667 A-G-A-A-AATTC---------------TAGTAGACCT-----GATGAT---GTCTGAGCTCTA-AGCAGAAGA
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Avahi_laniger.k141_765380                                  51653 46 -     92717 A-A-A-A-AATTC---------------TAATAGAAAT-----GATAAT---GTCTTAGCTCTA-AGCAGAAGC
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              52282 46 +     85213 A-A-A-A-AATTC---------------TAATAGAAAT-----GATAAT---GTCTTAGCTCTA-AGCAGAAGT
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             2695 48 -     10423 A-A-A-G---TTC---------------TAATAGAAGCTGTA-ACTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             22195 48 +     31915 A-A-A-A---TTC---------------TAATAGAAGCTGTA-ACTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            2665 48 +      5267 A-A-A-G---TTC---------------TAATAGAAGCTGTA-ACTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23587879 48 - 189096842 A-A-A-G---TTC---------------TAATAGAAGCTGTA-ACTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              9409 48 -     12001 A-A-A-G---TTC---------------TAATAGAAGCTGTA-ACTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10000803 39 -  17673402 a-g-a-a-a----------------------taggaaC-----TGCAAT---GTCTTAGCTCTA-AACAGAAGC
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2333267 33 -   7040546 a-g-a-a-a----------------------tagga-----------aT---GTCTTAGCTCTA-AACAGAAGC
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  401543 39 -   1652518 a-g-a-a-a----------------------taggaaC-----TGCAAT---GTCTTAGCTCTA-AACAGAAGC
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17797701 46 -  60362399 A-G-A-A-ATCTC---------------TGATGGAAAC-----AGTAAT---GTCTCAGCTCAA-AGCACAAGC
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    183758 46 -    185531 A-G-A-A-ATCTC---------------TGATGGAAAC-----AGTAAT---GTCTCAGCTCAA-AGCACAAGC
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9033144 46 -   9314153 a-g-a-a-atctc---------------tGATGGAAAC-----AGTAAT---GTCTCAGCTCAA-AGCACAAGC
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17957409 46 -  59632846 a-g-a-a-atctc---------------tGATGGAAAC-----AGTAAT---GTCTCAGCTCAa-agcacaagc
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18498747 46 +  63665305 a-g-a-a-atctc---------------tGATGGAAAC-----AGTAAT---GTCTCAGCTCAA-AGCACAAGC
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           153962 45 -    496798 a-a-a-a-at-ta---------------taataagaat-----AGTAAT---GTCTTAGCTCTA-AGCAGAAGC
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    136061 43 +    179628 ----A-A-GATTC---------------TAAAG-GAAT-----AGTAAT---GTCTTGGCTGCA-AGAAAAAGT
i Castor_canadensis.CasCan_scaffold_2074                 I 4 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     91383 61 +    217609 A-G-A-A-ATTTCTAAGGAAGAAATTTCTAATAAGAAC-----TATAAC---ATCCTAGCGTTA-AACAGAAGC
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          7319 48 -     11392 A-A-T-G---TTC---------------TAATAGAAGCTGTA-ACTAAT---GTCTTTGCTCTA-AGCAGAAGC
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               3417 48 -      7577 A-A-A-G---TTC---------------TAATAGAAGCTGTA-ACTAAT---GTCTTTGCTCTA-AGCAGAAGC
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_olivaceus.k141_1000828                                1396  7 -      2944 -------------------------------------------------------------------CAGAAGC
i Cebus_olivaceus.k141_1000828                           n 0 C 0
s Cebus_unicolor.k141_219506                                 14889  6 -     16904 --------------------------------------------------------------------ggtagt
i Cebus_unicolor.k141_219506                             n 0 C 0
s Cephalopachus_bancanus.k141_1423433                         3473 45 +     31688 A-A-A-A-AT-TA---------------TAATAAGAAT-----AGTAAT---GTCTTAGCTCTA-AGCAGAAGC
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12229820 46 +  27778364 a-g-a-a-atttc---------------tgATAGGAGC-----AGCAAT---GTCTTAGCTCCA-AGCAGAAGC
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634            847 46 -     25243 A-G-A-A-ATTTC---------------TGATAGGAGC-----AGCAAT---GTCTTAGCTCCA-AGCAGAAGC
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4472936 49 +   4669795 a-a-a-a-att-c---------------taaTAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        11483 49 -     19203 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           5905 49 +      8260 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           6132 49 +     27781 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         6288 49 -     20310 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           9267 49 +     29689 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            3697 49 +      9989 A-A-A-A-TTT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          11946 49 -     27936 A-A-A-A-TTT-C---------------TAATAGAAGCTGGA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                             821 49 -     17152 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38814351 49 +  39242232 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21220050 49 -  21565898 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       37169 49 -     53127 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        4450 49 +      7159 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       11972 49 -     27947 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         11945 49 +     17596 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          1168 49 +     26000 A-A-A-A-TTT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            5896 32 -      6351 ---------------------------------GGAA-----TGGAGAT---GTCAGAGCTCTC-AGCAGCAGA
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             19069 46 -     52598 A-G-A-A-AATTC---------------TAATAGGAAT-----GATAAT---GTCTTAGCTCTA-AGCAGAAGC
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           14414 46 +     57038 A-G-A-A-AATTC---------------TAATAGGAAT-----GATAAT---GTCTTAGCTCTA-AGCAGAAGC
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           8347 44 +     11226 ----------TTC---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Chiropotes_albinasus.k141_2813271                      I 3 C 0
s Chlorocebus_aethiops.ctg25                              18425908 49 -  18827391 A-A-A-A-CTT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       12346 49 -     50209 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135419354 49 + 135778131 a-a-a-a-att-c---------------taaTAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 16248 45 +     19366 G-A-A-A-TA-TC---------------TAATAGGAA-----TGGTAAT---GTCTTAGCTCTA-AGCAGAAGC
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            171347 45 +    839153 g-a-a-a-ta-tc---------------TAATAGGAA-----TGGTAAT---GTCTTAGCTCTA-AGCAGAAGC
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_172426              10484  1 -     10935 A-------------------------------------------------------------------------
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          C 0 I 1
s Colobus_angolensis.KN981557.1                            1907870 49 +   2368649 a-a-a-a-ttt-c---------------taaTAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGGAGAAGC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199947546 49 + 200372422 A-A-A-A-TTT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCGCTA-AGGAGAAGC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              34408 49 +     84244 A-A-A-A-TTT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGGAGAAGC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          12398 27 -     20389 -------------------------------------------TGTAAT---GTCTAAGCTTTA-AGCAGAAGC
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 1 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 47983 41 +     63868 ----A-A-AATTC---------------CAATAGACAA-----AGTAAT---GTCATAGTTCTA-AGCAGA---
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11665319 42 + 224834208 ----aaa-aaatc---------------CAGTAGGAAT-----AGCAAT---GTCTTAGTTCTA-AGTAGA---
i Cricetulus_griseus.LT883664.1                          I 1 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             26874 46 -     87169 A-T-A-A-ATTTC---------------TGATGGGAAC-----CATAAC---ATCTTAGCACTA-AGCAGAAGC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    835136 46 +   1526836 A-A-A-A-AATTC---------------TAATAAGAAA-----AGTAAT---ATCTTAGTTTTA-AGTAGAAGT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            62224 45 +   2246927 G-A-A-A-CG-AC---------------TAACAGGAA-----TAGTGAG---GTTGTAGCTCTG-AGCAGAAGT
i Dasypus_novemcinctus.JH564415.1                        C 0 I 7
s Daubentonia_madagascariensis.ctg71                      12535276 46 -  12879189 A-G-A-A-AATTC---------------TGATAGGAAT-----GGTAAC---GTCTTAACTCTA-ATCAGAAGC
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  671672 46 +   1390856 a-g-a-a-atttc---------------tGATAGGAGC-----AGCAAT---GTCTTAGCTCCA-AGCAGAAGC
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    4428 46 +    198055 A-G-A-A-ATTTC---------------TGATAGGAGC-----AGCAAT---GTCTTAGCTCCA-AGCAGAAGC
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE759718.1                                   8920 43 +     11740 a-g-a-a-atttc---------------tggTAAGAAT-----GG---T---GTCTTAGCTCTC-AGCAGAAGC
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          17508 42 -    110024 ----aaa-aaatc---------------CAATAAGAAT-----GGCAAT---ACCATAGTCCTA-AGCAGA---
i Ellobius_lutescens.LOEQ01008920.1                      I 1 C 0
s Ellobius_talpinus.LOJH01109367.1                            3561 43 -      6299 ----aaaaaaatc---------------caataagAAT-----GGCAAT---ATCGTAGTCCTA-AGCAGA---
i Ellobius_talpinus.LOJH01109367.1                       I 1 C 0
s Elephantulus_edwardii.JH947257.1                         1089455  1 +  10337057 a-------------------------------------------------------------------------
i Elephantulus_edwardii.JH947257.1                       C 0 I 1
s Enhydra_lutris.KZ291758.1                               16327711 46 -  41312741 a-g-a-a-atctc---------------TGATCGGAGC-----AGTAAT---GGCTTAGCTCTA-AGCAGAAGC
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1281727 46 +   4378816 a-g-a-a-atttc---------------tgATAGGAGC-----ACTAAT---GTCTTAGCTCTA-AGCAGAAGT
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18529548 46 -  39960074 a-g-a-a-atttc---------------tgATAGGAGC-----ACTAAT---GTCTTAGCTCTA-AGCAGAGGT
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               31563 46 +    498745 a-g-a-a-atttc---------------tgATAGGAGC-----ACTAAT---GTCTTAGCTCTA-AGCAGAGGT
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21202544 49 -  21539334 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              11761 46 -     14127 A-G-A-A-AATTC---------------TAATAGGAAT-----GATAAT---GTCTTAGCTCTA-AGCAGAAGC
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                4459 46 -     16928 A-G-A-A-AATTC---------------TAATAGGAAT-----GATAAT---GTCTTAGCTCTA-AGCAGAAGC
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              13496 46 -     25546 A-G-A-A-AATTC---------------TAATAGGAAT-----GATAAT---GTCTTAGCTCTA-AGCAGAAGC
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            10686 46 +     26330 A-G-A-A-AATTC---------------TAATAGGAAT-----GATAAT---GTCTTAGCTCTA-AGCAGAAGC
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 11925 46 +     23973 A-G-A-A-AATTC---------------TAATAGGAAT-----GATAAT---GTCTTAGCTCTA-AGCAGAAGC
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                10686 46 +     75513 A-G-A-A-AATTC---------------TAATAGGAAT-----GATAAT---GTCTTAGCTCTA-AGCAGAAGC
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  8628 46 +     97555 A-G-A-A-AATTC---------------TAATAGGAAT-----GATAAT---GTCTTAGCTCTA-AGCAGAAGC
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            11564 46 +     26496 A-G-A-A-AATTC---------------TAATAGGAAT-----GATAAT---GTCTTAGCTCTA-AGCAGAAGC
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  2161 46 -     17153 A-G-A-A-AATTC---------------TAATAGGAAT-----GATAAT---GTCTTAGCTCTA-AGCAGAAGC
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              11737 46 +    111500 A-G-A-A-AATTC---------------TAATAGGAAT-----GATAAT---GTCTTAGCTCTA-AGCAGAAGC
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20235568 46 + 206538554 a-g-a-a-atttg---------------tgATGGGAAC-----CCTAAC---ATCTTAGCTCTA-AGCAGAAGC
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20194411 46 + 205367284 a-g-a-a-atttg---------------tgATGGGAAC-----CCTAAC---ATCTTAGCTCTA-AGCAGAAGC
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  7925 46 -     36744 A-G-A-A-ATTTG---------------TGATGGGAAC-----CCTAAC---ATCTTAGCTCTA-AGCAGAAGC
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     424297 46 -    453645 A-G-A-A-ATTTC---------------TAGTAGGCCT-----GGTGAT---TTCTGAGCTCTA-AGCAGAAGC
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             2004 46 +     11339 A-G-A-A-ATTTC---------------TAGTAGGCCT-----GGTGAT---TTCTGAGCTCTA-AGCAGAATC
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1959596                            5811 46 +      6795 A-G-A-A-AATTC---------------TAGTAGGCCT-----GGTGAT---TTCTGAGCTCTA-AGCAGAAGA
i Galagoides_demidoff.k141_1959596                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_197845               2029 46 -      3123 A-G-A-C-AATTC---------------TAACAGAAAT-----GGTAAT---ATCTTAGCTCTA-AGTAGACGT
i Galeopterus_variegatus.GalVar_scaffold_197845          C 0 C 0
s Gorilla_beringei.k141_3596273                              13311 50 -     32273 A-A-A-A-ATTTC---------------TAATAGAAGCTGTA-ATTAAT---TCCTTTGCTCTA-AGCAGAAGC
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186335459 50 + 186649187 a-a-a-a-atttc---------------taatagAAGCTGTA-ATTAAT---TCCTTTGCTCTA-AGCAGAAGC
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           4815 46 -     19426 A-G-A-A-AATTC---------------TAATAGGAAT-----GATAAT---GTCTTAGCTCTA-AGCAGAAGC
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                              9964 46 -     15286 A-G-A-A-AATTC---------------TAATAGGAAT-----GATAAT---GTCTTAGCTCTA-AGCAGAAGC
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             11603 46 +     18253 A-G-A-A-AATTC---------------TAATAGGAAT-----GATAAT---GTCTTAGCTCTA-AGCAGAAGC
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         11704 46 -     41752 A-G-A-A-AATTC---------------TAATAGGAAT-----GATAAT---GTCTTAGCTCTA-AGCAGAAGC
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         11542 46 -     16460 A-G-A-A-AATTC---------------TAATAGGAAT-----GATAAT---GTCTTAGCTCTA-AGCAGAAGC
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               240719 46 +    327341 A-C-A-A-ATTTC---------------TGATGGGAAC-----CATAAT---GTCTTAGCTCTA-AGCAGAAGC
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       110203 27 +   1711038 -------------------------------------------TGTAAT---GCCTTAGCTCTA-AGCAGAAGC
i Hipposideros_armiger.JXIK01000431.1                    I 1 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               41626 27 +     43066 -------------------------------------------TGTAAT---GCCTTAGCTCTA-AGCAGAAGC
i Hipposideros_galeritus.HipGal_scaffold_29171           I 1 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 701  1 +       961 A-------------------------------------------------------------------------
i Heterohyrax_brucei.HetBruBak_scaffold_383740           C 0 I 1
s Hoolock_leuconedys.ctg274                                    432122 50 +    630532 A-A-A-A-ATTTC---------------TAACAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  42850 46 +     55795 A-T-A-A-ATTTC---------------CGATGGGAAC-----CATAAC---GTCTTAGCTCTA-AGCAAAAGC
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_307679                               15059 50 -     15490 A-A-A-A-ATTTC---------------TAAAAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              57065 50 +     67168 A-A-A-A-ATTTC---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189540715 50 - 191637585 A-A-A-A-ATTTC---------------TAATAGAAGCTGTA-ATTAAT---GCCTTAGCTCTA-AGCAGAAGC
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3333609 50 -  11177569 A-A-A-A-ATTTC---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7518087 45 -   7955117 a-g-a-a-aattc---------------taatcgGA-G-----GATAAT---GTTTTGGCTCTA-GGAAGAAGT
i Ictidomys_tridecemlineatus.JH393364.1                  I 1 C 0
s Indri_indri.k141_3655594                                   20509 46 +     31101 A-A-A-A-AATTC---------------TAATAGGAAT-----GATAAT---GTCTTAGCTCTA-AGCAGAAGT
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15522066 46 -  30322482 A-G-A-A-AATCC---------------TAATAGGAAT-----GATAAT---GTCTTAGCTCTA-AGCAGAAAC
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        5062 45 +     64341 ------A---TTC---------------CAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Leontocebus_fuscicollis.k141_1820339                   I 2 C 0
s Leontocebus_illigeri.k141_3350179                           2120 48 +      4941 A-A-A-A---TTC---------------CAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        4988 48 +     35603 A-A-A-A---TTC---------------CAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    26459 48 +     38576 A-A-A-A---TTC---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         23156 48 +     66356 A-A-A-A---TTC---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          8947 46 -     23766 A-G-A-A-AATTC---------------TAATAGGAAT-----GATAAT---GTCTTAGCTCTA-AGCAGAAGC
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             26894 46 +     45836 A-G-A-A-AATTC---------------TAATAGGAAT-----GATAAT---GTCTTAGCTCTA-AGCAGAAGC
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_320948                          1118 46 -      1719 A-G-A-A-AATTC---------------TAATAGGAAT-----GATAAT---GTCTTAGCTCTA-AGCAGAAGC
i Lepilemur_ruficaudatus.k141_320948                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      24949 46 +     54090 A-G-A-A-AATTC---------------TAATAGGAAT-----GATAAT---GTCTTAGCTCTA-AGCAGAAGC
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.APMU01168965.1                       491 46 -      1094 a-g-a-a-atctc---------------tGATGGGAAC-----AGTAAT---GTCTTAGCTCTA-AGCAGAAGC
i Leptonychotes_weddellii.APMU01168965.1                 C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     3951 44 -     14121 ----A-A-AATTG---------------TAATAAGAAT-----GGTAAT---GGCTTAGCTCTA-AGAGAAAGC
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1434481 49 +   1826925 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            3754 46 +     11245 A-G-A-A-AATTC---------------TAGTAGGCCT-----AGTGAT---GTCTGAGCTCTA-AGCAGAAGC
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1002592 46 +   6120653 A-G-A-A-AATTC---------------TAGTAGGCCT-----AGTGAT---GTCTGAGCTCTA-AGCAGAAGC
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214986  1 -  43346337 a-------------------------------------------------------------------------
i Loxodonta_africana.GL010049.1                          C 0 I 1
s Lycaon_pictus.CM007581.1                                17953649 46 -  59628241 a-g-a-a-atctc---------------tGATGGAAAC-----AGTAAT---GTCTCAGCTCAa-agcacaagc
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               4294 49 +     40492 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTCGCTCTA-AGCAGAAGC
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59673556 49 +  60120075 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 10050 49 -     26193 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            77854 49 -    114318 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  3553 49 -     23192 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                13013 49 -     29190 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  21581 49 +     37952 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186836669 49 + 187317192 a-a-a-a-att-c---------------taaTAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25455232 49 -  25927173 a-a-a-a-att-c---------------taatAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  77430 49 +     89720 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 4427 49 +     20474 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   4229 49 -     14993 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  327099 49 -    668171 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 2539 49 -     24072 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               23168 49 -     45290 A-A-A-A-ATT-C---------------TAACAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 88994 43 +     94391 A-G-A-A-ATTTC---------------TGGTAAGAAC-----AG---T---GTCTTAGCTCTC-AGCAGAAGC
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23934755 49 -  24302211 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               348888 49 +    752769 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              17837 45 +    737560 a-g-a-a-atgtc---------------TCATGGCAGT-----GGTAAT---GTCTtaactcta-agaagaaa-
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              49223 45 -    317179 a-g-a-a-atgtc---------------tCATGGCAGT-----GGTAAT---GTCTtaactcta-agaagaaa-
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33100395 45 -  40650429 a-g-a-a-aattc---------------taatcGGA-G-----GATAAT---GTTTTGGCTCTA-GGAAGAAGT
i Marmota_marmota.CZRN01000018.1                         I 1 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         8735 27 -    207569 -------------------------------------------TGTAAT---GGCTCAGGTTTA-AGCAGAAGC
i Megaderma_lyra.MegLyr_scaffold_4542                    I 1 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              8430 46 +     13704 A-G-A-A-ATCTC---------------TGATCAGAAC-----AGTAAT---GGCTTAGCTCTA-AGCAGAAGC
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 30586 39 +    140813 --------AAATG---------------CAATAAAAGT-----GGTAAC---ATCTTAGTTCTA-AGCAGA---
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12180379 42 -  29670104 ----aaa-aaatc---------------CAGTAGGAAT-----GACAAT---GTCTTACTTCTA-AGAAGA---
i Mesocricetus_auratus.KB708134.1                        I 1 C 0
s Mico_argentatus.k141_1239457                                3241 48 -      7380 A-A-A-G---TTC---------------TAATAGAAGCTGTA-ACTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               2307 48 +     18990 A-A-A-G---TTC---------------TAATAGAAGCTGTA-ACTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      3246 48 -      7356 A-A-A-G---TTC---------------TAATAGAAGCTGTA-ACTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18289453 46 -  93316391 a-g-a-a-aattc---------------TAATAGGAAT-----GATAAT---GTCTTAGCTCTA-AGCAGAAGC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    17546  1 -    145209 -------------------------------------------------------------------------A
i Microgale_talazaci.MicTal_scaffold_6613                I 1 I 32
s Microtus_ochrogaster.CM001695.1                         11258559 42 -  27267610 ----aaa-aaaat---------------caataagaat-----ggCAAT---ATCTTAGTCCTA-AGCAGA---
i Microtus_ochrogaster.CM001695.1                        I 542 C 0
s Miopithecus_ogouensis.k141_534055                           6475 49 -     28506 A-A-A-A-ATT-C---------------TGATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         3905 46 -      8324 A-G-A-A-ATCTC---------------TGATGGGAAC-----AGTAAT---GTCTTAGCTCTA-AGCAGAAGC
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      7026 46 -     37649 A-G-A-A-AATTC---------------TAATAGGAAT-----GATAAT---GTCTTAGCTCTA-AGCAGAAGC
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 139690 46 -    366855 A-G-A-A-ATTTC---------------TGGTAGGAAC-----AGAAAT---GTCTCAGTTCTA-AGCAGAAGC
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   33826 46 +     37127 A-T-A-A-ATTTC---------------TGATGGGAAC-----CATAAT---GTCTTAGCTCTA-AGCAGAAGC
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Mus_caroli.LT608237.1                                   84358996 42 - 120012414 ----t-a-aaacc---------------caATGAGAAT-----TGAAAT---ACCTTAGTTCTAAAGCAGA---
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87647980 42 - 129401213 ----t-a-aaacc---------------caaTGAGAAT-----TGAAAT---ACCTTAgttctaaagcaga---
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31352648 36 -  89631738 ----A-A-A---------------------ATGAGAAT-----TGGAAT---GCCTTAGTTCTAAAGCAGA---
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90750058 42 - 130317789 ----t-a-aaacc---------------caaTGAGAAT-----GGAAAT---ACCTTAGTTCTAAAGCAGA---
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               299609 41 -  14710649 a-g-a-a-atctc---------------tGATCGGAAC-----AGTAAT---GG-----CTCTT-AGCAGAAGC
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187170 45 +    196477 G-A-A-A-TA-TC---------------TAATAGGAA-----TAGTAAC---AACTTAGCTCCA-AGTAGAAGC
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nasalis_larvatus.k141_413338                               12471 49 +     21681 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9147907 46 -   9404916 a-g-a-a-atctc---------------tGATGGAAAC-----AGTAAT---GTCTCAGCTCAA-AGCACAAGC
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102577515 46 - 196305487 A-G-A-A-AATTC---------------CAGTAGGCCT-----AGTGAT---GTCTGAGCTCTA-AGCAGAAGC
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             5201 46 +      8486 A-G-A-A-AATTC---------------CAGTAGGCCT-----AGTGAT---GTCTGAGCTCTA-AGCAGAAGC
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105747942 46 + 199412804 A-G-A-A-AATTC---------------TAGTAGGCCT-----AGTGAT---GTCTGAGCTCTA-AGCAGAAGC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1361034 46 +   3988456 a-g-a-a-aaata---------------taaaaagaat-----attaat---gtCTTAGCTTCA-AGCAGAAGC
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              505055 46 -   2017862 a-g-a-a-atctc---------------TGATGGGAAC-----AGTAAT---GTCTTAGCTCTA-AGCAGAAGC
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   22134 42 +     28053 ----AAA-AAATC---------------CAATAAGAAT-----GGCAAT---ATCATAGTCCTA-AGCAGA---
i Ondatra_zibethicus.OndZib_scaffold_46174               I 1 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    77211 42 +    102263 ----AAA-AAATC---------------CAATAGGAAT-----GGCAAT---ATCTTGGTTCTA-AGCTGC---
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               7545  1 -     18566 -------------------------------------------------------------------------C
i Orycteropus_afer.OryAfe_flattened_line_144387          I 39 C 0
s Oryctolagus_cuniculus.CM000791.1                        67144796 44 + 174332312 ----A-A-AATTG---------------TAATAAGAAT-----AGTAAT---GGCTTATCTCTA-AGCGAAAGC
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       460663 46 -    559221 a-g-a-a-atctc---------------TGATGGAAAC-----AGTAAT---GTCTCAGCTCAA-AGCACAAGC
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         1839 46 +      8798 A-G-A-A-AATTC---------------TAGTAGGCCT-----GGTGAT---TTCTGAGCTCTA-AGCAGAAGC
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             694004 45 -   1103335 --g-a-a-aattc---------------tagtaGGCCT-----GGTGAT---TTCTGAGCTCTA-AGCAGAAGC
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    41408 50 +     80009 g-a-a-a-atttc---------------tAATAGAAGCTGTA-ATTAAT---TCCTTTGCTCTA-AGCAGAAGC
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189140320 50 + 189151597 a-a-a-a-atttc---------------taataGAAGCTGTA-ATTAAT---TCCTTTGCTCTA-AGCAGAAGC
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  149577 46 +    230217 A-G-A-A-ATTTC---------------TGATGGGAAC-----CCTAAC---ATCTTAGCTCTA-AGCAGAAGC
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                262782 46 +  18783137 a-g-a-a-atttc---------------tgATGGGAAC-----CCTAAC---ATCTTAGCTCTA-AGCAGAAGC
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4719419 46 -   8748460 a-g-a-a-atttc---------------tgATGGGAAC-----CCTAAC---ATCTTAGCTCTA-AGCAGAAGC
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183440509 49 + 183742232 a-a-a-a-att-c---------------taaTAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             4202 49 +     20448 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20561008 49 +  20919399 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   2946 49 +     41871 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     6232 49 +     27711 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  6311 49 +      9205 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11040 46 -     78924 A-G-A-A-ATTTC---------------TGATGGGAAC-----CATAAT---GTCTTAGCTCTA-AGCAGAAGC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            7967 46 +     13100 A-G-A-A-AATTC---------------TAGTAGGCCT-----GGTGAT---GTCTGAGCTCTA-AGCAGAAGA
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             6345 46 +     25941 A-G-A-A-AATTC---------------TAGTAGGCCT-----GGTGAT---GTCTGAGCTCTA-AGCAGAAGA
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18191811 40 -  18517816 ------a-aaaac---------------caataggAAT-----GGCAGT---GTCTTAGTTCTA-AGCTGA---
i Peromyscus_maniculatus.KI615324.1                      I 1 C 0
s Piliocolobus_badius.k141_1234363                           40979 48 +     62158 A-A-A-A--TT-C---------------TAATAGAAGTTGTA-ATTAAT---GCCTTTGCTCTA-AGGAGAAGC
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        35708 49 +     89929 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGGAGAAGC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            37124 49 +     51399 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGGAGAAGC
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14293362 49 -  14605196 a-a-a-a-att-c---------------taaTAGAAGTTGTA-ATTAAT---GCCTTTGCTCTA-AGGAGAAGC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189128439 50 + 189387572 a-a-a-a-atttc---------------taaTAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9568047 50 +   9816681 A-A-A-A-ATTTC---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               70634 49 -     81375 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              2454 49 +     19060 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 10450  1 -     22811 A-------------------------------------------------------------------------
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 I 1
s Prolemur_simus.MPIZ01000396.1                            2594716 46 -   4620579 a-g-a-a-aattc---------------taATAGGAAT-----GATAAT---GTCTTAGCTCTA-AGCAGAAGC
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     988707 46 +   2598838 a-a-a-a-aattc---------------taataggAAT-----GATAAT---GTCTTAGCTCTA-AGCAGAAGC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          27017 46 +     38485 A-A-A-A-AATTC---------------TAATAGGAAT-----GATAAT---GTCTTAGCTCTA-AGCAGAAGC
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             3177 46 +      4256 A-A-A-A-AATTC---------------TAATAGGAAT-----GATAAT---GTCTTAGCTCTA-AGCAGAAGC
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          24537 46 +     35766 A-A-A-A-AATTC---------------TAATAGGAAT-----GATAAT---GTCTTAGCTCTA-AGCAGAAGC
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           2720 46 -     24134 A-A-A-A-AATTC---------------TAATAGGAAT-----GATAAT---GTCTTAGCTCTA-AGCAGAAGC
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        26534 46 -     67325 A-A-A-A-AATTC---------------TAATAGGAAT-----GATAAT---GTCTTAGCTCTA-AGCAGAAGC
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           2770 46 -      6182 A-A-A-A-AATTC---------------TAATAGGAAT-----GATAAT---GTCTTAGCTCTA-AGCAGAAGC
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             8228 39 -     21651 --------aaatg---------------caataaAAGT-----GGTAAC---ATCGTAGTTCTA-AGCAGA---
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            13081 46 -     21811 a-a-a-a-atttc---------------tGATAGTAAC-----GGTAAT---GTCTTAGTTCTA-AGCAGAGGC
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         38621 46 +     42204 A-G-A-A-ATCTC---------------TGATCGGAGC-----AGTAAT---GGCTTAGCTCTA-AGCAGAAGC
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22975179 46 +  28871421 a-g-a-a-atttc---------------tgataAGAAC-----GG---TAACGTCTTAGCTCTC-AGCAGAAGC
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1358268 46 +   4952924 a-g-a-a-atttc---------------tgataAGAAC-----GG---TAATGTCTTAGCTCTC-AGCAGAAGC
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20272696 46 -  38429054 a-g-a-a-atttc---------------tgATGGGAAC-----CCTAAC---ATCTTAGCTCTA-AGCAGAAGC
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             12469 49 -     91421 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7606595 49 +   7812017 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             12443 49 -     72585 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53568063 42 +  90668790 ----a-a-aagcc---------------cAATAGGAAT-----GGTAAT---GTTTTagttgtaaaacaaa---
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             4150 49 -     11128 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91233505 49 - 195417433 a-a-a-a-att-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7669154 49 +   7961872 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                86192 43 -     96226 A-G-A-A-ATTTC---------------TGATAATAAC-----AG---T---GTCTTACCTCTC-AGCAGAAGC
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               5368 48 -      8359 A-A-A-A---TTC---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            11676 48 -     13588 A-A-A-A---TTC---------------TGATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              5314 48 -      6207 A-A-A-A---TTC---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               11041 48 +     13640 A-A-A-A---TTC---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               5904 48 +      8564 A-A-A-A---TTC---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209466181 49 + 209938924 A-AAA-A---TTC---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 5395 48 -      9399 A-A-A-A---TTC---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 2541 48 +      3421 A-A-A-A---TTC---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119948718 48 - 121099817 A-A-A-A---TTG---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGTGGAAGC
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       21174 46 +     46362 ----A-A---TTG---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGTGGAAGC
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               21269 46 +     45824 ----A-A---TTG---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGTGGAAGC
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             37895 48 -     64574 A-A-A-A---TTG---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGTGGAAGC
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                                901 48 -     23631 A-A-A-A---TTG---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGTGGAAGC
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 21165 43 -     61129 -----------TG---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGTGGAAGC
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          16977 49 -     19888 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      24180 49 +     39453 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            4706 49 +     27826 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             4226 49 -     19483 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      4288 49 +      7198 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         12548 49 +     15514 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11216 33 -     12148 ------A-AAATC---------------CAATAGGAAT-----GGCAAT---GTC-------TA-AGCAGA---
i Sigmodon_hispidus.SigHis_scaffold_60841                I 1 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               2206 44 +   1910179 A-A-A-T-A-GTC---------------TAACAGGAT------TTTAAT---GCCATAGATCTA-AGCAGAAGA
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1951283 45 -   3870691 a-g-a-a-aattc---------------taatcaGA-G-----GATAAT---GTTTTGGCTCTA-GGAAGAAGT
i Spermophilus_dauricus.KZ294078.1                       I 1 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             29138 46 +     97271 A-G-A-A-ATCTC---------------TGATCAGAAC-----AGTAAT---GGCTTAGCTCTA-AGCAGAAGC
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              16720 46 -    196729 a-t-a-a-atTTC---------------TGATGGGAAC-----CATAAT---GCCTTAGCTCTA-AGCAGAAGC
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.JH118708.1                                      33917 46 -     47482 a-g-a-a-atttc---------------tAATAAGAGC-----TATAAT---GTCTTAGCTCTA-AACAGAAGC
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1090757 50 -   1523678 A-A-A-A-ATTTC---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 9020 44 +     41958 ----G-A-ATTTC---------------CAACAGCAAC-----AGTAAT---GTCTCAGTTCTA-CGCAGAAGC
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 1 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 70524 45 +    116680 G-A-A-A-TA-TC---------------TAATAGGAA-----TGGTAAT---AGCTTGGCTCCA-AGTAGAAAC
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      117144 46 -    156842 A-G-A-A-ATTTC---------------TGATAGGAGC-----AGTAAT---GTCTTAGCTCTA-AGCAAAAGC
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    385597 46 +    539355 A-G-A-A-ATTTC---------------TGATAGGAGC-----AGTAAT---GTCTTAGCTCTA-AGCAAAAGC
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               24084 45 +     70052 A-A-A-A-AT-TA---------------TAATAAGAAT-----AGTAAT---GTCTTAGCTCTA-AGCGGAATC
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_2029956                               3429 40 +      4644 A-A-A-A-AT-TA--------------------AGAAT-----AGTAAT---GTCTTAGCTCTA-AGCGGAAGC
i Tarsius_wallacei.k141_2029956                          C 0 C 0
s Theropithecus_gelada.CM009954.1                        186425874 49 + 186847797 a-a-a-a-att-c---------------taaTAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   3090 45 +      8208 G-A-A-A-CA-TC---------------TAATAGGAA-----TGGTGAC---ATCGTAGCTCT-AAGCAGAAGC
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Trachypithecus_auratus.k141_722599                          8279 49 -     20410 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    12473 49 +     15221 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GTCTTTGCTCTA-AGCAGAAGC
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        8380 49 +     19930 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       4809 49 -     19997 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GTCTTTGCTCTA-AGCAGAAGC
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            44929 49 -     60166 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        12401 49 -     27529 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     12343 49 -     18194 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           6076 49 -     21137 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GTCTTTGCTCTA-AGCAGAAGC
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    4779 49 -     10723 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GTCTTTGCTCTA-AGCAGAAGC
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         3931 49 +      9834 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GTCTTTGCTCTA-AGCAGAAGC
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        22247 49 +     32220 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GTCTTTGCTCTA-AGCAGAAGC
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5936346 49 +   6242583 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GTCTTTGCTCTA-AGCAGAAGC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        5594 49 +     20839 A-A-A-A-ATT-C---------------TAATAGAAGCTGTA-ATTAAT---GCCTTTGCTCTA-AGCAGAAGC
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2153114 46 +   4065304 a-a-aaa-aattc---------------taattggACT-----GGTAA----ATCTTAGCTTTA-AGCAGAGGA
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     6733 45 -     10553 A-A-A-A-AACTC---------------TAATTGGACT-----GGTAA----ATCTTAGCTTAA-AGCAGAAGA
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4848832 46 -   5085361 a-g-a-a-atctc---------------TGATCAGAAC-----AGTAAT---GTCTTAGCTCTA-AGCAGAAGC
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   9399 46 +     50397 A-G-A-A-AATTC---------------TAATAGGAAT-----GATAAT---GTCTTAGCTCTA-AGCAGAAGC
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              9453 46 +     24756 A-G-A-A-AATTC---------------TAATAGGAAT-----GATAAT---GTCTTAGCTCTA-AGCAGAAGC
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5370303 25 -   5488506 a-g-a-a-g----------------------taggAAC-----TGCAAT---GTCTTAG---------------
i Vicugna_pacos.KN270157.1                               C 0 I 1
s Vulpes_lagopus.VulLag_flattened_line_30954                  9317 46 -     43706 A-G-A-A-ATCTC---------------TGATGGAAAC-----AGTAAT---GTCTCAGCTCAA-AGCACAAGC
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        22529 46 -     24430 A-G-A-A-AATTC---------------TAATCAGAAG-----GATAAT---GTTTTAGCTCTA-GGCAGAAGT
i Xerus_inauris.XerIna_scaffold_48378                    I 1 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          3549 46 +     86975 A-G-A-A-ATCTC---------------TGATGGGAAC-----AGTAAT---GTCTTAGCTCTA-AGCAGAAGC
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383  9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Crocidura_indochinensis.CroInd_scaffold_287352              1624  0 +      4208 I
e Condylura_cristata.JH655891.1                           17547132  5 -  53390261 I
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       4108 31 +     62944 AAATAATGA-TTTCC-ATA-------ACACTAACCTGTCC
s Acinonyx_jubatus.LLWD01001279.1                           825743 31 -   1699592 AAATTATCA-TTTAC-ATA-------ATCATAACCTCTCC
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     68317 30 +     87051 -AATAATGG-TTAGC-ATA-------ACCTTAACCTGGCC
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9509000 31 -  29979442 AAATTATCT-TTTGC-ATA-------ACCACAACTTCTCC
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             77789 31 -    347723 AAATTATCA-TTTGC-ATA-------ACCATAACCTCTCC
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     71997 38 -     89534 AAATAATGA-TTTGC-ATAGTTGCATAAGCTAATCTGTCC
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   12026 31 -     52922 AAATAATGA-TTTCC-GTA-------GCAGCAACCTCTCC
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         11960 31 -     28001 AAATAACGA-TTTCC-ATA-------GCAGCAACCTCTCC
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          2406 31 -     18505 AAATAACGA-TTTCC-ATA-------GCAGCAACCTCTCC
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           3255 31 -     12518 AAATAACGA-TTTCC-ATA-------GCAGCAACCTCTCC
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                               857 31 -     27731 AAATAATGA-TTTTC-CTA-------ACACTAATCTGTCC
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                 982 31 +      3134 AAATAATGA-TTTTC-CTA-------ACACTAATCTGTCC
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               1118 31 -     45847 AAATAATGA-TTTTC-CTA-------ACACTAATCTGTCC
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                22323 31 +     25266 AAATAATGA-TTTTC-CTA-------ACACTAATCTGTCC
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           1507 31 +      2906 AAATAATGA-TTTTC-CTA-------ACACTAATCTGTCC
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            15620 31 -     18578 AAATAATGA-TTTTC-CTA-------ACACTAATCTGTCC
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              1007 31 +     47717 AAATAATGA-TTTTC-CTA-------ACACTAATCTGTCC
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             1137 31 -      3544 AAATAATGA-TTTTC-CTA-------ACACTAATCTGTCC
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             12357 31 +     50774 AAATAATGA-TTTTC-CTA-------ACACTAATCTGTCC
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  12980 31 -     33861 AAATAATGA-TTTGC-CTA-------ACACTAACCTGTCC
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            13000 31 -     34016 AAATAATGA-TTTGC-CTA-------ACACTAACCTGTCC
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4295397 31 -   5030052 AAATAATGA-TTTGC-CTA-------ACACTAACCTGTCC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             13002 31 -     34685 AAATAATGA-TTTGC-CTA-------ACACTAACCTGTCC
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               26123 31 -     47192 AAATAATGA-TTTGC-CTA-------ACACTAACCTGTCC
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                       9990 27 +     20879 AAATA---A-CTTGC-ACA-------ACACTAACCTGTT-
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 1
s Arctocebus_calabarensis.k141_2318572                        9372 31 +     14667 AAATAATGA-TTTTT-ATA-------ACACTAACCTGTCC
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Avahi_laniger.k141_765380                                  51699 31 -     92717 AAATAATGA-TTTGC-ATA-------AACTTAACCTGTCC
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              52328 31 +     85213 AAATAATGA-TTTGC-ATA-------ACCCTAACCTGTCC
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             2743 31 -     10423 AAATAATGA-TTTGC-CTA-------ACACTAACCTGTCC
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             22243 31 +     31915 AAATAATGA-TTCGC-CTA-------ACACTAACCTGTCC
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            2713 31 +      5267 AAATAATGA-TTTGC-CAA-------ACACTAACCTGTCC
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23587927 31 - 189096842 AAATAATGA-TTTGC-CAA-------ACACTAACCTGTCC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              9457 31 -     12001 AAATAATGA-TTTGC-CAA-------ACACTAACCTGTCC
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10000842 31 -  17673402 AAATTATCA-TTTGC-ATA-------GCCCTAACCTCTCC
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2333300 31 -   7040546 AAATTATCA-TTTGC-ATA-------GCCCTAACCTCTCC
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  401582 31 -   1652518 AAATTATCA-TTTGC-ATA-------GCCCTAACCTCTCC
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17797747 31 -  60362399 AAATTATCA-TTTGC-ATA-------ACCATAACCTCTCC
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    183804 31 -    185531 AAATTATCA-TTTGC-ATA-------ACCATAACCTCTCC
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9033190 31 -   9314153 AAATTATCA-TTTGC-ATA-------ACCATAACCTCTCC
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17957455 31 -  59632846 aaattatca-tttgc-ata-------accataacctctcc
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18498793 31 +  63665305 AAATTATCA-TTTGC-ATA-------ACCATAACCTCTCC
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           154007 31 -    496798 AAACAATGA-TTTAC-CTA-------ACCCTAACCTGTCC
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    136104 29 +    179628 AA--CATAA-TTTGC-ATA-------ACCCTAACCTGTCC
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     91444 31 +    217609 AAATTATCA-TCTGC-ATG-------ACCCTAACCTCTCC
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          7367 31 -     11392 AAATAATGA-TTTGC-CAA-------ACACTAACCTGTCC
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               3465 31 -      7577 AAATAATGA-TTTGC-CAA-------ACACTAACCTGTCC
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_olivaceus.k141_1000828                                1403 31 -      2944 ATATAATGA-TTTGC-CTA-------ACATGAACCTGTCC
i Cebus_olivaceus.k141_1000828                           C 0 C 0
s Cebus_unicolor.k141_219506                                 14895  8 -     16904 atatcctg--------------------------------
i Cebus_unicolor.k141_219506                             C 0 n 0
s Cephalopachus_bancanus.k141_1423433                         3518 31 +     31688 AAACAGTGA-TTTAC-CTA-------ACCCTAACCTGTCC
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12229866 31 +  27778364 AAATTATCA-TTTGC-ATA-------ACCCTATCTTCTCC
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634            893 31 -     25243 AAATTATCA-TTTGC-ATA-------ACCCTATCTTCTCC
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4472985 31 +   4669795 AAATAATGA-TTTCC-GTA-------ACAGCAACCTGTCC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        11532 31 -     19203 AAATAATGA-TTTCC-GTA-------ACAGCAACCTGTCC
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           5954 31 +      8260 AAATAATGA-TTTCC-GTA-------ACAGCAACCTGTCC
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           6181 31 +     27781 AAATAATGA-TTTCC-GTA-------ACAGCAACCTGTCC
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         6337 31 -     20310 AAATAACGA-TTTCC-GTA-------GCAGCAACCTCTCC
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           9316 31 +     29689 AAATAACGA-TTTCC-GTA-------GCAGCAACCTCTCC
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            3746 31 +      9989 AAATAACGA-TTTCC-GTA-------GCAGCAACCTCTCC
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          11995 31 -     27936 AAATAATGA-TTTCT-GTA-------GCAGCAACCTCTCC
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                             870 31 -     17152 AAATAATGA-TTTCC-ATA-------GCAGCAACCTCTCC
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38814400 31 +  39242232 AAATAATGA-TTTCC-GTA-------GCAGCAACCTCTCC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21220099 31 -  21565898 AAATAATGA-TTTCC-ATA-------GCAGCAACCTCTCC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       37218 31 -     53127 AAATAATGA-TTTCC-ATA-------GCAGCAACCTCTCC
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        4499 31 +      7159 AAATAACGA-TTTCC-GTA-------GCAGCAACCTCTCC
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       12021 31 -     27947 AAATAATGA-TTTCC-ATA-------GCAGCAACCTCTCC
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         11994 31 +     17596 AAATAATGA-TTTCC-ATA-------GCAGCAACCTCTCC
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          1217 31 +     26000 AAATAACGA-TTTCC-GTA-------GCAGCAACCTCTCC
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            5928 31 -      6351 GAGGGAACG-TTTGC-ATA-------ACCCTAACCTCTCC
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 C 0
s Cheirogaleus_major.k141_333249                             19115 31 -     52598 AAATAATGA-TTTGC-ATA-------ACCCTAACCTGTCC
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           14460 31 +     57038 AAATAATGA-TTTGC-ATA-------ACCCTAACCTGTCC
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           8391 31 +     11226 AAATAATGA-TTTGC-CTA-------ACACTAACCTGTCC
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18425957 31 -  18827391 AAATAACGA-TTTCC-GTA-------GCAGCAACCTCTCC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       12395 31 -     50209 AAATAACGA-TTTCC-GTA-------GCAGCAACCTCTCC
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135419403 31 + 135778131 AAATAACGA-TTTCC-GTA-------GCAGCAACCTCTCC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 16293 31 +     19366 AAATTAACA-TTTGC-ATA-------ACCCTAACCTCTCC
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            171392 31 +    839153 AAATTAACA-TTTGC-ATA-------ACCCtaacctctcc
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_172426              10486 31 -     10935 AAATTAACA-TTTAT-ACC-------ACCCTAACCTCTCC
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          I 1 I 209
s Colobus_angolensis.KN981557.1                            1907919 31 +   2368649 AAATAATGA-TTTCC-GTA-------ACAGTTACCTGTCC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199947595 31 + 200372422 AAATAATGA-TTTCC-GTA-------ACAGTTATCTGTCC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              34457 31 +     84244 AAATAATGA-TTTCC-GTA-------ACAGTAACCTGTCC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          12425 32 -     20389 AAATTATCA-TTTTCTATA-------ACCTTAACTTCTCC
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 48024 30 +     63868 -AATAATGA-TTTGC-ATA-------ATCCTCAACTATCC
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 7
s Cricetulus_griseus.LT883664.1                           11665361 30 + 224834208 -AATAATGA-TTTTT-GTA-------ATCCTAACCTGTCC
i Cricetulus_griseus.LT883664.1                          C 0 I 14
s Cryptoprocta_ferox.CryFer_flattened_line_16129             26920 31 -     87169 AAATTATCA-TTTGC-ATA-------ACCATAACCTCTCC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    835182 31 +   1526836 AAACAAAGA-TTCAA-ACA-------ACCCTAACTTGCTA
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            62276  7 +   2246927 -----------------TA-------ACAct---------
i Dasypus_novemcinctus.JH564415.1                        I 7 I 174
s Daubentonia_madagascariensis.ctg71                      12535322 31 -  12879189 AAATAATGA-TTTGC-ATA-------ACACTAACCTTTCC
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  671718 31 +   1390856 AAATTATCA-TTTGC-ATA-------ACCCTAACCTCTCC
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    4474 31 +    198055 AAATTATCA-TTTGC-ATA-------ACCCTATCCTCTCC
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE759718.1                                   8963 31 +     11740 AAATTATCA-TTTGC-ATA-------ACCATAATTTCTCC
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1089457  9 +  10337057 actt----tTTTT---------------------------
i Elephantulus_edwardii.JH947257.1                       I 1 I 1162
s Ellobius_lutescens.LOEQ01008920.1                          17550 30 -    110024 -AATAATGA-TTTTC-CTA-------AGCCTACCTTGTCC
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01109367.1                            3604 30 -      6299 -AATAATGA-TTTGC-CTA-------AGCCTACCTTGTCC
i Ellobius_talpinus.LOJH01109367.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16327757 31 -  41312741 AAATTATCA-TTTGC-ATA-------ACCATAACCTCTCC
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1281773 31 +   4378816 AAATCATCA-TTTGT-ATA-------ACCCTAACCTCTCC
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18529594 31 -  39960074 AAATCATCA-TTTGT-ATA-------ACCCTAACCTCTCC
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               31609 31 +    498745 AAATCATCA-TTTGT-ATA-------ACCCTAACCTCTCC
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21202593 31 -  21539334 AAATAATGA-TTTCC-GTA-------GCAGCAACCTCTCC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              11807 31 -     14127 AAATAATGA-TTTGC-ATA-------ACCCTAACCTGTCC
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                4505 31 -     16928 AAATAATGA-TTTGC-ATA-------ACCCTAACCTGTCC
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              13542 31 -     25546 AAATAATGA-TTTAC-ATA-------ACCCTAACCTGTCC
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            10732 31 +     26330 AAATAATGA-TTTGC-ATA-------ACCCTAACCTGTCC
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 11971 31 +     23973 AAATAATGA-TTTGC-ATA-------ACCCTAACCTGTCC
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                10732 31 +     75513 AAATAATGA-TTTGC-ATA-------ACCCTAACCTATCC
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  8674 31 +     97555 AAATAATGA-TTTGC-ATA-------ACCCTAACCTGTCC
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            11610 31 +     26496 AAATAATGA-TTTGC-ATA-------ACCCTAACCTGTCC
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  2207 31 -     17153 AAATAATGA-TTTGC-ATA-------ACCCTAACCTGTCC
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              11783 31 +    111500 AAATAATGA-TTTGC-ATA-------ACCCTAACCTGTCC
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20235614 31 + 206538554 AAATTATCA-TTTAC-ATA-------ATCATAACCTCTCC
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20194457 31 + 205367284 AAATTATCA-TTTAC-ATA-------ATCATAACCTCTCC
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  7971 31 -     36744 AAATTATCA-TTTAC-ATA-------ATCATAACCTCTCC
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     424343 30 -    453645 AAATAATGA--TTGC-ATA-------ACCCTAACCTATCC
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             2050 30 +     11339 AAATAATGA--TTGC-ATA-------ACCCTAACCTATCC
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1959596                            5857 31 +      6795 AAATAATGA-TTTGC-ATA-------ACCCTAACCTATCC
i Galagoides_demidoff.k141_1959596                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_197845               2075 31 -      3123 AAATAATGA-TTTGC-ATA-------ACCCTAACCTGTCG
i Galeopterus_variegatus.GalVar_scaffold_197845          C 0 C 0
s Gorilla_beringei.k141_3596273                              13361 31 -     32273 AAATAATGA-TTTCC-GTA-------ACACTAACCTGTCC
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186335509 31 + 186649187 AAATAATGA-TTTCC-GTA-------ACACTAACCTGTCC
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           4861 31 -     19426 AAATAATGA-TTTGC-ATA-------ACCCTAACCTGTCC
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             10010 31 -     15286 AAATAATGA-TTTGC-ATA-------ACCCTAACCTGTCC
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             11649 31 +     18253 AAATAATGA-TTTGC-ATA-------ACCCTAACCTGTCC
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         11750 31 -     41752 AAATAATGA-TTTGC-ATA-------ACCCTAACCTGTCC
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         11588 31 -     16460 AAATAATGA-TTTGC-ATA-------ACCCTAACCTGTCC
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               240765 31 +    327341 AAATTATAA-TTTGC-ATA-------ACCATAACCTCTCC
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_383740                 703  8 +       961 AAAA----A-TTT---------------------------
i Heterohyrax_brucei.HetBruBak_scaffold_383740           I 1 N 0
s Hipposideros_armiger.JXIK01000431.1                       110230 31 +   1711038 AAATTATCA-TTTGC-AAA-------ACCTTAACCTCTCC
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               41653 31 +     43066 TAATTATCA-TTTGT-GAA-------ACCTTAACCTCTCC
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    432172 31 +    630532 AAATAATGA-TTTCC-GTA-------ACACTAACCTGTCC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  42896 30 +     55795 AAATTATCA-TTTGC-ATA-------ACCATAACCT-TCC
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_307679                               15109 31 -     15490 AAATAATGA-TTTCC-GTA-------ACACTAACCTGTCC
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              57115 31 +     67168 AAATAATGA-TTTCC-GTA-------ACACTAACCTGTCC
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189540765 31 - 191637585 AAATAATGA-TTTCC-GTA-------ACACTAACCTGTCC
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3333659 31 -  11177569 AAATAATGA-TTTCC-GTA-------ACACTAACCTGTCC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7518132 31 -   7955117 AAATAATAA-CTTCC-ATG-------ATATTAATCTGCCC
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   20555 31 +     31101 AAATAATGA-TTTGC-ATA-------ACCCTAACTTGTCC
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15522112 31 -  30322482 AAATAATGA-TTTGC-ATA-------ACCCTAACCTGTCC
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        5107 31 +     64341 AAATAATGA-TTTGC-CTA-------ACACTAACCTGTCC
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           2168 31 +      4941 AAATAATGA-TTTGC-CTA-------ACACTAACCTGTCC
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        5036 31 +     35603 AAATAATGA-TTTGC-CTA-------ACACTAACCTGTCC
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    26507 31 +     38576 AAATAATGA-TTTCC-ATA-------ACACTAACCTGTCC
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         23204 31 +     66356 AAATAATGA-TTTCC-ATA-------ACACTAACCTGTCC
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          8993 31 -     23766 AAATAATGA-TTTAC-GTA-------ACCCTAACCTGTCC
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             26940 31 +     45836 AAATAATGA-TTTAC-ATA-------ACCCTAACCTGTCC
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_320948                          1164 31 -      1719 AAATAATGA-TTTAC-ATA-------ACCCTAACCTGTCC
i Lepilemur_ruficaudatus.k141_320948                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      24995 31 +     54090 AAATAATGA-TTTAC-ATA-------ACCCTAACCTGTCC
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.APMU01168965.1                       537 31 -      1094 AAATTATCA-TTTGC-ATA-------ACCATAACCTCTCC
i Leptonychotes_weddellii.APMU01168965.1                 C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     3995 31 -     14121 AAATAATGG-TTTGT-ATA-------TCTCTAATCTGTTC
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1434530 31 +   1826925 AAATAATGA-TTTCC-GTA-------ACAGCAACCTGTCC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            3800 31 +     11245 AAATAATGA-TTTGC-ATA-------ACCCTAACCTGTCC
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1002638 31 +   6120653 AAATAATGA-TTTGC-ATA-------ACCCTAACCTGTCC
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4214988  8 -  43346337 aaaa----a-ttt---------------------------
i Loxodonta_africana.GL010049.1                          I 1 I 448
s Lycaon_pictus.CM007581.1                                17953695 31 -  59628241 aaattatca-tttgc-ata-------accataacctctcc
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               4343 31 +     40492 AAATAATGA-TTTCC-ATA-------ACAGCAACCTGTCC
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59673605 31 +  60120075 AAATAATGA-TTTCC-GTA-------ACAGCAACCTGTCC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 10099 31 -     26193 AAATAATGA-TTTCC-ATA-------ACAGCAACCTGTCC
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            77903 31 -    114318 AAATAATGA-TTTCC-GTA-------ACAGCAACCTGTCC
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  3602 31 -     23192 AAATAATGA-TTTCC-ATA-------ACAGCAACCTGTCC
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                13062 31 -     29190 AAATAATGA-TTTCC-ATA-------ACAGCAACCTGTCC
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  21630 31 +     37952 AAATAATGA-TTTCC-ATA-------ACAGCAACCTGTCC
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186836718 31 + 187317192 AAATAATGA-TTTCC-ATA-------ACAGCAACCTGTCC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25455281 31 -  25927173 AAATAATGA-TTTCC-ATA-------ACAGCAACCTGTCC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  77479 31 +     89720 AAATAATGA-TTTCC-ATA-------ACAGCAACCTGTCC
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 4476 31 +     20474 AAATAATGA-TTTCC-ATA-------ACAGCAACCTGTCC
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   4278 31 -     14993 AAATAATGA-TTTCC-ATA-------ACAGCAACCTGTCC
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  327148 31 -    668171 AAATAATGA-TTTCC-ATA-------ACAGCAACCTGTCC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 2588 31 -     24072 AAATAATGA-TTTCC-GTA-------ACAGCAACCTGTCC
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               23217 31 -     45290 AAATAATGA-TTTCC-ATA-------ACAGCAACCTGTCC
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 89037 31 +     94391 AAAGTATCA-TTTGC-ATA-------ACCATAATTTCTCC
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23934804 31 -  24302211 AAATAATGA-TTTCC-GTA-------ACAGCAACCTGTCC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               348937 31 +    752769 AAATAATGA-TTTCC-GTA-------ACAGCAACCTGTCC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              17882 31 +    737560 aaattgtaa-tTTGC-ATA-------AACCTAACCTCTCC
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              49268 31 -    317179 aaattgtaa-tttgC-ATA-------AACCTAACCTCTCC
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33100440 31 -  40650429 AAATAATAA-CTTCC-ATG-------ACATTAATCTGCCC
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         8762 31 -    207569 AAATTATTA-TTTGC-ATA-------ACCTTAACCTCTCC
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              8476 30 +     13704 AAATTATCA-TTTGC-ATA-------ACCATAATCTCTT-
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 30625 30 +    140813 -AATAATAA-TTAGC-ATA-------GTCCTAACCTGTCC
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12180421 30 -  29670104 -AATAATGA-TTTtc-cta-------atcctaacctgtcc
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                3289 31 -      7380 AAATAATGA-TTTGC-CTA-------ACACTAACCTGTCC
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               2355 31 +     18990 AAATAATGA-TTTGC-CTA-------ACACTAACCTGTCC
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      3294 31 -      7356 AAATAATGA-TTTGC-CTA-------ACACTAACCTGTCC
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18289499 31 -  93316391 AAATAATGA-TTTGC-ATA-------ACCCTAACCTGCCC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    17579 31 -    145209 AAATAAATG-TTTGC-ACA-------ACACTTACATCTCT
i Microgale_talazaci.MicTal_scaffold_6613                I 32 I 173
s Microtus_ochrogaster.CM001695.1                         11258601 30 -  27267610 -AATAATGA-TTTGC-CTA-------AACCTACCTTGTCC
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miopithecus_ogouensis.k141_534055                           6524 31 -     28506 AAATAATGA-TTTCC-GTA-------GCAGCAACCTCTCC
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         3951 31 -      8324 AAATTATCA-TTTGC-ATA-------ACCATAACCTCTCC
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      7072 31 -     37649 AAATAATGA-TTTGC-ATA-------ACCCTAACCTGCCC
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 139736 31 -    366855 AAGTTATCA-TTTGC-TTA-------ACCTTAACCTCTCC
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 5
s Mungos_mungo.MunMun_flattened_line_23663                   33872 31 +     37127 AAATTATCA-TTTGC-ATA-------ACCATAACCTCTAC
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Mus_caroli.LT608237.1                                   84359038 30 - 120012414 -AATAATGA-TTTAC-GTA-------ATCCTAACCTGTCC
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87648022 30 - 129401213 -aataataa-ttTAC-GTA-------ATCCTAACCTGTCC
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31352684 30 -  89631738 -AATCATGA-TTTAC-ATA-------ATCCTAACCTGCCC
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90750100 30 - 130317789 -AATAATGA-TTTAC-ATA-------ATCCTAACCTGTCC
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               299650 31 -  14710649 AAATTATCA-TTTGC-ATA-------ACCATAACCTCTCC
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187215 31 +    196477 AAATTAAAG-TTTGC-ATA-------GCCCTAACCACTCC
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nasalis_larvatus.k141_413338                               12520 31 +     21681 AAATAATGA-TTTCT-GTA-------ACAGTAACCTGTCC
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9147953 31 -   9404916 AAATTATCA-TTTGC-ATA-------ACCATAACCTCTCC
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102577561 31 - 196305487 AAATAATGA-TTTGA-ATA-------ACCCTAACCTGTCC
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             5247 31 +      8486 AAATAATGA-TTTGA-ATA-------ACCCTAACCTGTCC
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105747988 31 + 199412804 AAATAATGA-TTTGA-ATA-------ACCCTAACCTGTCC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1361080 31 +   3988456 AAATAATAA-TTTGC-ATA-------ATTCTAAGCTGTTC
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              505101 31 -   2017862 AAATTATCA-TTTGC-ATA-------ACCATAACCTCTCC
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   22176 30 +     28053 -AATAATGA-TTTGC-CTA-------AGCCTACCTTGTCC
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 1
s Onychomys_torridus.OnyTor_scaffold_2986                    77253 30 +    102263 -AATAATGA-CTTGC-ACA-------GTCCTAACCTGTCC
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               7546 31 -     18566 AAATTAACA-TTTAT-ATA-------ACTGTAACCTCTCC
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 I 1418
s Oryctolagus_cuniculus.CM000791.1                        67144840 31 + 174332312 AAATAATGT-TTTGT-ATA-------TCTCTAATCTGTTC
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       460709 31 -    559221 AAATTATCA-TTTGC-ATA-------ACCATAACCTCTCC
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         1885 30 +      8798 AAATAATGA--TTGC-ATA-------ACCCTAACCTATCC
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             694049 30 -   1103335 AAATAATGA--TTGC-ATA-------ACCCTAACCTATCC
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    41458 31 +     80009 AGATAATGA-TTTCC-ATA-------ACACTAACCTGTCC
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189140370 31 + 189151597 AAATAATGA-TTTCC-GTA-------ACACTAACCTGTCC
i Pan_troglodytes.CM009242.2                             C 0 I 84
s Panthera_onca.PanOnc_flattened_line_3271                  149623 30 +    230217 AAATTATCA-TTTAC-ATA-------ATCATAACC-CTCC
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                262828 31 +  18783137 ACATTATCA-TTTAC-ATA-------ATCATAACCTCTCC
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4719465 31 -   8748460 AAATTATCA-TTTAC-ATA-------ATCATAACCTCTCC
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183440558 31 + 183742232 AAATAATGA-TTTCT-GTA-------ACAGCAACCTGTCC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             4251 31 +     20448 AAATAATGA-TTTTC-GTA-------ACAGCAACCTGTCC
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20561057 31 +  20919399 AAATAATGA-TTTCC-GTA-------ACAGCAACCTGTCC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   2995 31 +     41871 AAATAATGA-TTTCC-GTA-------ACAGCAACCTGTCC
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     6281 31 +     27711 AAATAATGA-TTTCC-GTA-------ACAGCAACCTGTCC
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  6360 31 +      9205 AAATAATGA-TTTCC-GTA-------ACAGCAACCTGTCC
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11086 31 -     78924 AAATTATCA-TTTGC-ATA-------ACCATAACCTCTCT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            8013 31 +     13100 AAATAATGA-TTTGT-ATA-------ACCCTAACCTGTCC
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             6391 31 +     25941 AAATAATGA-TTTGT-ATA-------ACCCTAACCTGTCC
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18191851 30 -  18517816 -AATAATGA-CTTGC-ATA-------GTCCTAACCTGTCT
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Piliocolobus_badius.k141_1234363                           41027 30 +     62158 AAAT-ATGA-TTTCC-GTA-------ACAGTAACCTGTCC
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        35757 30 +     89929 AAAT-ATGA-TTTCC-GTA-------ACAGTAACCTGTCC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            37173 30 +     51399 AAAT-ATGA-TTTCC-GTA-------ACAGTAACCTGTCC
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14293411 30 -  14605196 AAAT-ATGA-TTTCC-GTA-------ACAGTAACCTGTCC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189128489 31 + 189387572 AAATAATGA-TTTCT-GTA-------ACACTAACCTGTCC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9568097 31 +   9816681 AAATAATGA-TTTCT-GTA-------ACACTAACCTGTCC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               70683 31 -     81375 AAATAATGA-TTTCC-ATA-------ACAGTAACCTGTCC
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              2503 31 +     19060 AAATAATGA-TTTCC-ATA-------ACAGTAACCTGTCC
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 10452  8 -     22811 AAAA----A-TTT---------------------------
i Procavia_capensis.ProCapCap_scaffold_85530             I 1 I 688
s Prolemur_simus.MPIZ01000396.1                            2594762 31 -   4620579 AAATAATGA-TTTGC-ATA-------ACCCTAACCTGTCC
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     988753 31 +   2598838 AAATAATGA-TTTGC-ATA-------ACCCTAACCTGTCC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          27063 31 +     38485 AAATAATGA-TTTGC-ATA-------ACCCTAACCTGTCC
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             3223 31 +      4256 AAATAATGA-TTTGC-ATA-------ACCCTAACCTGTCC
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          24583 24 +     35766 A-------A-TTTGC-ATA-------ACCCTAACCTGTCC
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           2766 24 -     24134 A-------A-TTTGC-ATA-------ACCCTAACCTGTCC
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        26580 31 -     67325 AAATAATGA-TTTGC-ATA-------ACCCTAACCTGTCC
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           2816 31 -      6182 AAATAATGA-TTTGC-ATA-------ACCCTAACCTGTCC
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             8267 30 -     21651 -AATAATAA-TTAGC-ATA-------GTCCTAACTTGTCC
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            13127 31 -     21811 AAGTTATCA-TTTGC-ATA-------ACCTTAGCCTCTCC
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         38667 31 +     42204 AAAGTATCA-TTTGC-ATA-------ACCATAACCTCTCC
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22975225 31 +  28871421 AAATTATCA-TTTGC-ATA-------ACCATAATTTCACC
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1358314 31 +   4952924 GAATTATCA-TTTGC-ATA-------ACCGTAATTTCACC
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20272742 31 -  38429054 AAATTATCA-TTTAC-ATA-------ATCATAACCTCTCC
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             12518 31 -     91421 AAATAATGA-TTTCT-GTA-------ACAGTAACCTGTCC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7606644 31 +   7812017 AAATAATGA-TTTCT-GTA-------ACAGTAACCTGTCC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             12492 31 -     72585 AAATAATGA-TTTCT-GTA-------ACAGTAACCTGTCC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53568105 30 +  90668790 -aataatga-tttgT-GTA-------ATCCTAGCCTGTTC
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             4199 31 -     11128 AAATAATGA-TTTCT-GTA-------ACAGTAACCTGTCC
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91233554 31 - 195417433 AAATAATGA-TTTCT-GTA-------ACAGTAACCTGTCC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7669203 31 +   7961872 AAATAATGA-TTTCT-GTA-------ACAGTAACCTGTCC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                86235 31 -     96226 AAATTATCA-TTTGC-ATA-------ACCATAATTTCTCC
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               5416 31 -      8359 AAATAATGA-TTTGC-CTA-------ACACTAACCTGTCC
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            11724 31 -     13588 AAATAATGA-TTTGC-CTA-------ACACTAACCTGTCC
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              5362 31 -      6207 AAATAATGA-TTTGC-CTA-------ACACTAACCTGTCC
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               11089 31 +     13640 AAATAATGA-TTTGC-CTA-------ACACTAACCTGTCC
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               5952 31 +      8564 AAATAATGA-TTTGC-CTA-------ACAGTAACCTGTCC
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209466230 31 + 209938924 AAATAATGA-TTTGC-CTA-------ACACTAACCTGTCC
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 5443 31 -      9399 AAATAATGA-TTTGC-CTA-------ACACTAACCTGTCC
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 2589 31 +      3421 AAATAATGA-TTTGC-CTA-------ACACTAACCTGTCC
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119948766 31 - 121099817 ATATAATGA-TTTGC-GTA-------ACACTAACCTGTCC
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       21220 31 +     46362 ATATAATGA-TTTGC-GTA-------ACACTAACCTGTCC
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               21315 31 +     45824 ATATAATGA-TTTGC-GTA-------ACACTAACCTGTCC
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             37943 31 -     64574 ATATAATGA-TTTGC-GTA-------ACACTAACCTGTCC
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                                949 31 -     23631 ATATAATGA-TTTGC-GTA-------ACACTAACCTGTCC
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 21208 31 -     61129 ATATAATGA-TTTGC-GTA-------ACACTAACCTGTCC
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          17026 31 -     19888 AAATAATGA-TTTCC-ATA-------ACAGTAACCTGTCC
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      24229 31 +     39453 AAATAATGA-TTTCC-GTA-------ACAGTAACCTGTCC
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            4755 31 +     27826 AAATAATGA-TTTCC-GTA-------ACAGTAACCTGTCC
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             4275 31 -     19483 AAATAATGA-TTTCC-GTA-------ACAGTAACCTGTCC
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      4337 31 +      7198 AAATAATGA-TTTCC-ATA-------ACAGTAACCTGTCC
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         12597 31 +     15514 AAATAATGA-TTTCC-GTA-------ACAGTAACCTGTCC
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11249 30 -     12148 -AATAATAA-TTTGT-AAA-------ATGCTAACCTGTCC
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               2250 31 +   1910179 AAGTGACCA-TTTGC-ATA-------ACCCTAACTTCTCC
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1951328 31 -   3870691 AAATAATAA-CTTCC-ATG-------ACATTAATCTGCCC
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             29184 31 +     97271 AAATTCTAA-TTTGT-ATA-------ACCATAACCTTTCC
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              16766 31 -    196729 AAATTATCA-TTTGC-ATA-------GCCATAACCTCTCC
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.JH118708.1                                      33963 31 -     47482 AAATTATCA-TTTGC-ATA-------ACCCTAACCTCTCC
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1090807 31 -   1523678 AAATAATGA-TTTCC-GTA-------ACACTAACCTGTCC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 9064 31 +     41958 AAATGATCA-TTTGC-ATA-------ACCTTAACCTCTCC
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 70569 31 +    116680 AAATTAATG-TTTGC-ATA-------GCCCTAACCTCTCC
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      117190 31 -    156842 AAATTATCA-TTTGC-ACA-------ACTCTAACCTCTCC
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    385643 31 +    539355 AAATTATCA-TTTGC-ACA-------ACTCTAACCTCTCC
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               24129 31 +     70052 AAATAATGA-TTTAC-CTA-------ACCCTAACCTGTCC
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_2029956                               3469 31 +      4644 AAATAATGA-TTTAC-CTA-------ACCCTAACCTGTCC
i Tarsius_wallacei.k141_2029956                          C 0 C 0
s Theropithecus_gelada.CM009954.1                        186425923 31 + 186847797 AAATAATGA-TTTCC-GTA-------ACAGCAACCTGTCC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   3135 31 +      8208 GAATTAGCA-TTTGC-AGA-------TCCCTAACCTCTCC
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Trachypithecus_auratus.k141_722599                          8328 31 -     20410 AAATAATGA-TTTCC-GTA-------ACAGTAACCTGTCC
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    12522 31 +     15221 AAATAATGA-TTTCC-GTA-------ACAGTAACCTGTCC
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        8429 31 +     19930 AAATAATGA-TTTCC-GTA-------ACAGTAACCTGTCC
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       4858 31 -     19997 AAATAATGA-TTTCC-GTA-------ACAGTAACCTGTCC
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            44978 31 -     60166 AAATAATGA-TTTCC-GTA-------ACAGTAACCTGTCC
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        12450 31 -     27529 AAATAATGA-TTTCC-GTA-------ACAGTAACCTGTCC
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     12392 31 -     18194 AAATAATGA-TTTCC-TTA-------ACAGTAACCTGTCC
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           6125 31 -     21137 AAATAATGA-TTTCC-GTA-------ACAGTAACCTGTCC
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    4828 31 -     10723 AAATAATGA-TTTCC-GTA-------ACAGTAACCTGTCC
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         3980 31 +      9834 AAATAATGA-TTTCC-GTA-------ACAGTAACCTGTCC
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        22296 31 +     32220 AAATAATGA-TTTCC-GTA-------ACAGTAACCTGTCC
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5936395 31 +   6242583 AAATAATGA-TTTCC-GTA-------ACAGTAACCTGTCC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        5643 31 +     20839 AAATAATGA-TTTCC-GTA-------ACAGTAACCTGTCC
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2153160 31 +   4065304 AAATGATGA-TTTGC-AAA-------ACCCTAACCTGGTC
i Tupaia_chinensis.KB320699.1                            C 0 I 35
s Tupaia_tana.TupTan_flattened_line_97126                     6778 31 -     10553 AAATAATGA-TTTGC-AAA-------ACTCTAACCTGGCC
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 35
s Ursus_maritimus.KK499267.1                               4848878 31 -   5085361 AAATTATCT-TTTGC-ATA-------ACCATAACCTCTCC
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   9445 31 +     50397 AAATAATGA-TTTGC-ACA-------ACCCTAAACTGTCC
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              9499 31 +     24756 AAATAATGA-TTTGC-ATA-------ACCCTAAACTGTCC
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5370329 31 -   5488506 AAATTATCA-CTTGC-ATA-------GCCCTAACCTCTCC
i Vicugna_pacos.KN270157.1                               I 1 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  9363 31 -     43706 AAATTATCA-TTTGC-ATA-------ACCATAACCTCTCC
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        22575 31 -     24430 AAATAATAA-CTTGC-ATG-------ACACTAATCTGTCC
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          3595 31 +     86975 AAATTATCA-TTTGC-ATA-------ACCATAATCTCTCC
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52383  9 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Sorex_araneus.JH798187.1                                13648689 801 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152183 10 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Crocidura_indochinensis.CroInd_scaffold_287352              1624  0 +      4208 I
e Condylura_cristata.JH655891.1                           17547132  5 -  53390261 I
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       4139 84 +     62944 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGGCC---AT-AATAATAA--TTCTCT--GCA--GCTGGACAG---AAC---CCA---C-A----AGGTT
s Acinonyx_jubatus.LLWD01001279.1                           825774 82 -   1699592 TTC-A-AAC-TGT---AATGAAA-ATTGAACT---------------AG--AG-AA--GATGTGGAA-TG-CC---AC-AAT---AA--CTCTTT--GCA--CCTGGGCAG---AAC---CTA---T-A----AGACT
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     68347 73 +     87051 ----T-AAA-TATTAAAAAAAAA-ATTGAGCT---------------AC--A-GGAA-ACTTAG-GG-TGCTCAC-TA-AA----------CTCT--GCA--GTTAGATGA---GTC---CCA---------------
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9509031 82 -  29979442 TTC-A-AAC-TAT---AATGAAA-ATTGAACT---------------GG--AG-AA--GATTTGGAA-TA-CC---AC-AAT---AA--CTCTTT--GCA--CCTAGGAAG---AAC---CTA---T-A----AGGCT
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             77820 82 -    347723 TTC-A-AAC-TAT---AATGATA-ATTGAACT---------------GG--AG-AA--GATTTGGAA-TG-GC---AC-AAT---AA--CTTTCT--GCA--GCTGGGCAG---TAC---CTA---C-A----AGGCT
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     72035 79 -     89534 TTC-T-AAC-TGT---AGTGAAA-ATTGACCT---------------AGAGA--AA--ATTTCA-AC-TAGTC-CTAATAA----------TTCT--ATAGCTCTGAATAG---GATGTACAA---------------
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   12057 84 -     52922 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCA--GCTGGACAG---AAC---TCA---C-A----AAGTT
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         11991 84 -     28001 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------GG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCA--GCTGAACAG---AAC---CCA---C-A----AAGTT
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          2437 84 -     18505 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCA--GCTGAACAG---AAC---CCA---C-A----AAGTT
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           3286 84 -     12518 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------GG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCA--GCTGAACAG---AAC---CCA---C-A----AAGTT
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                               888 84 -     27731 TCC-G-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GAGCTG-GATTGGCT---AT-AATAATAA--CTCTCT--ACA--GCTGGACAG---ACC---CAA---C-A----AAGCT
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                1013 84 +      3134 TCC-G-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GAGCTG-GATTGGCT---AT-AATAATAA--CTCTCT--ACA--GCTGGACAG---ACC---CAA---C-A----AAGCT
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               1149 83 -     45847 TCC-G-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GAGCTG-GATTGGCT---AT-AAT-ATAA--CTCTCT--ACA--GCTGGACAG---ACC---CAA---C-A----AAGCT
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                22354 84 +     25266 TCC-G-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GAGCTG-GATTGGCT---AT-AATAATAA--CTCTCT--ACA--GCTGGACAG---ACC---CAA---C-A----AAGCT
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           1538 84 +      2906 TCC-G-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GAGCTG-GATTGGCT---AT-AATAATAA--CTCTCT--ACA--GCTGGACAG---ACC---CAA---C-A----AAGCT
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            15651 84 -     18578 TCC-G-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GAGCTG-GATTGGCT---AT-AATAATAA--CTCTCT--ACA--GCTGGACAG---ACC---CAA---C-A----AAGCT
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              1038 84 +     47717 TCC-G-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GAGCTG-GATTGGCT---AT-AATAATAA--CTCTCT--ACA--GCTGGACAG---ACC---CAA---C-A----AAGCT
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             1168 84 -      3544 TCC-G-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GAGCTG-GATTGGCT---AT-AATAATAA--CTCTCT--ACA--GCTGGACAG---ACC---CAA---C-A----AAGCT
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             12388 84 +     50774 TCC-G-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GAGCTG-GATTGGCT---AT-AATAATAA--CTCTCT--ACA--GCTGGACAG---ACC---CAA---C-A----AAGCT
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  13011 84 -     33861 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GAGCTG-GATTGGCT---AT-AATAATAA--CTCTCT--GCC--CCTGGACAG---ACC---CAA---C-A----AAGCT
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            13031 84 -     34016 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GAGCTG-GATTGGCT---AT-AATAATAA--CTCTCT--GCC--CCTGGACAG---ACC---CAA---C-A----AAGCT
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4295428 84 -   5030052 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GAGCTG-GATTGGCT---AT-AATAATAA--CTCTCT--GCC--CCTGGACAG---ACC---CAG---C-A----Aagct
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             13033 84 -     34685 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GAGCTG-GATTGGCT---AT-AATAATAA--CTCTCT--GCC--CCTGGACAG---ACC---CAG---C-A----AAGCT
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               26154 84 -     47192 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GAGCTG-GATTGGCT---AT-AATAATAA--CTCTCT--GCC--CCTGGACAG---ACC---CAA---C-A----AAGCT
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      10018 73 +     20879 ----------------AAGGAAC-ACTGAACT---------------AG--AT-AAA-ATTTGT-TT-TGGCT---AC-AAC---AA--CTCTTT--GTG--CTTGGATAA---AAC---CAA---TGA-----GACT
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 1 C 0
s Arctocebus_calabarensis.k141_2318572                        9403 83 +     14667 TTATA-GCC-TAT---AGTGAAA-ATTAGGCT---------------AC--AA-A--G-CTTTA-GAATAGCC---AT-AAT---AA--TTCTTT--GCA--CCTAAACAG---AAC---CCA---C-A----AGTTT
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Avahi_laniger.k141_765380                                  51730 83 -     92717 TGC-A-AAC-TAT---AATGAAA-ATTAATCT---------------AT--AG-AA--GACTTG-GATTGGCC---AC-AGT---AA--CTCTTT--GTA--CCTGGATAG---AAC---CCA---C-A----AGTCT
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              52359 83 +     85213 TGC-A-AAC-TAT---AATGAAA-ATTAATCT---------------AT--AG-AA--GACTTG-GATTGGCC---AC-AGT---AA--CTCTTT--GTA--CCTGGATAG---AAC---CCA---C-A----AGTCT
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             2774 84 -     10423 TCA-G-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GAGCTG-GATTGGCC---AT-AATAATAA--CTCTCT--GCA--GCTGGACAG---ACC---CAA---C-A----AAGCT
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             22274 84 +     31915 TCG-G-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GAGCTG-GGTTGGCT---AT-AATGATAA--CTCTCT--GCA--GCTGGACAG---ACC---CAA---C-A----AAGGT
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            2744 84 +      5267 TCA-G-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GAGCTG-GATTGGCC---AT-AATAATAA--CTCTCT--GCA--GCTGGACAG---ACC---CAA---C-A----AAGCT
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23587958 84 - 189096842 TCA-G-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GAGCTG-GATTGGCC---AT-AATAATAG--CTCTCT--GCA--GCTGGACGG---ACC---CAA---C-A----AAGCT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              9488 84 -     12001 TCA-G-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GAGCTG-GATTGGCC---AT-AATAATAG--CTCTCT--GCA--GCTGGACGG---ACC---CAA---C-A----AAGCT
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10000873 84 -  17673402 TCC-AAAAC-TGT---AATGGAA-TCTGACCT---------------AG--AG-AA--GATTTGGAA-TGGCC---AC-AGT---AA--GTCTTA--AAG--CCAGGGCAT---GTC---CTA---C-A----AGACT
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2333331 84 -   7040546 TCC-AAAAC-TGT---AATGGAA-TCTGACCT---------------AG--AG-AA--GATTTGGAA-TGGCC---AC-AGT---AA--GTCTTA--AAG--CCAGGGCAT---GTC---CTA---C-A----AGACT
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  401613 84 -   1652518 TCC-AAAAC-TGT---AATGGAA-TCTGACCT---------------AG--AG-AA--GATTTGGAA-TGGCC---AC-AGT---AA--GTCTTA--AAG--CCAGGGCAT---GTC---CTA---C-A----AGACT
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17797778 82 -  60362399 TTC-A-AAT-TGT---AATGAAA-ATTGAGCT---------------GG--AG-AA--GATTTGGAA-TG-CC---AC-AAT---AA--CTCTTT--GCA--CCTGGGTAG---AAC---CTA---T-A----AGGCT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    183835 82 -    185531 TTC-A-AAT-TGT---AATGAAA-ATTGAGCT---------------GG--AG-AA--GATTTGGAA-TG-CC---AC-AAT---AA--CTCTTT--GCA--CCTGGGTAG---AAC---CTA---T-A----AGGCT
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9033221 82 -   9314153 TTC-A-AAT-TGT---AATGAAA-ATTGAGCT---------------GG--AG-AA--GATTTGGAA-TG-CC---AC-AAT---AA--CTCTTT--GCA--CCTGGGTAG---AAC---CTA---T-A----AGGCT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17957486 82 -  59632846 ttc-a-aat-tgt---aatgaaa-attgagct---------------gg--ag---aagatttggaa-tg-cc---ac-aat---aa--ctcttt--gca--cctgggtag---aac---cta---t-a----aggct
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18498824 82 +  63665305 TTC-A-AAT-TGT---AATGAAA-ATTGAGCT---------------GG--AG-AA--GATTTGGAA-TG-CC---AC-AAT---AA--CTCTTT--GCA--CCTGGGTAG---AAC---CTA---T-A----AGGCT
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           154038 83 -    496798 ttc-a-aat-tat---aatgaaa-attgaGCT---------------AG--AG-A--TGATTTG-TATTGGCC---CT-AAT---AA--CCCTTT--GTA--CCTGGACAG---GAC---CCA---C-A----AGCCT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    136133 82 +    179628 TCA-G-AAC-TCT---GGTGAAA-ACTGAGTT---------------GG--A-GAA--ATTTAG-AC-TTGATAC-AA---T---AA--CTCTCT--ACA--CAGGGATAG---GAC---CCA---CAA-----AACT
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     91475 83 +    217609 TTC-A-AAT-TAT---AAAGAAA-TTTGAGCT---------------AG--AG-AA--GATTTGGAA-TGGCC---AC-AGT---AT--GTCTTT--AAA--CCTGGGCAT---GAC---CTA---T-A----AGGCT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          7398 84 -     11392 TCA-G-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GAGCTG-GATTGGCC---AT-AATAATAA--CTCTCT--GCA--GCTGGACAG---ACC---CAA---C-A----AAGCT
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               3496 84 -      7577 TCA-G-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GAGCTG-GATTGGCC---AT-AATAATAA--CTCTCT--GCA--GCTGGACAG---ACC---CAA---C-A----AAGCT
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_olivaceus.k141_1000828                                1434 84 -      2944 TCC-G-AGC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GAGCCG-GACTGGCT---GT-CATAATAA--ATCTCT--GCA--GCTGGACAG---ACC---CAA---C-A----AAGCT
i Cebus_olivaceus.k141_1000828                           C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         3549 83 +     31688 TTC-A-AAT-TAT---AATGAAA-ATTGAGCT---------------AG--AG-A--CGATTTG-TATTGGCC---CT-AAT---AA--CTCTTT--GTA--CCTGGACAG---GAC---CCA---C-A----AGCCT
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12229897 84 +  27778364 TCC-AAAAC-TGT---AATGAAA-ATTGAGCT---------------AG--AG-AA--GATTTGGAA-TGGCC---AC-ACT---AA--CTCTTT--GTA--CCGGGGTAG---GAC---CTA---C-A----AGACT
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634            924 84 -     25243 TCC-AAAAC-TGT---AATGAAA-ATTGAGCT---------------AG--AG-AA--GATTTGGAA-TGGCC---AC-ACT---AA--CTCTTT--GTA--CCGGGGTAG---GAC---CTA---C-A----AGACT
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4473016 84 +   4669795 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCG--GCGGGACAG---AAC---CCA---C-a----aagtt
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        11563 84 -     19203 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCG--GCGGGACAG---AAC---CCA---C-A----AAGTT
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           5985 84 +      8260 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCG--GCGGGACAG---AAC---CCA---C-A----AAGTT
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           6212 84 +     27781 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCG--GCGGGACAG---AAC---CCA---C-A----AAGTT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         6368 84 -     20310 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCA--GCGGGACAG---AAC---TCA---C-A----AAGTT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           9347 84 +     29689 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCA--GCGGGACAG---AAC---TCA---C-A----AAGTT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            3777 84 +      9989 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCA--GCTGGACAG---AAC---CCA---C-A----AAGTT
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          12026 84 -     27936 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCA--GCGGGACAG---AAC---CCA---C-A----AAGTT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                             901 84 -     17152 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCA--GCGGGACAG---AAC---TCA---C-A----AAGTT
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38814431 82 +  39242232 TCC-A-AAC-TAT---AATGAAA-A-TGAGCT---------------GG--AG-----GATTTG-GATTGACT---GT-AGTAACAA---TCTTT--GCA--GTGGGACAG---AAC---CCA---C-A----AAGTT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21220130 84 -  21565898 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCA--GCGGGACAG---AAC---TCA---C-A----AAGTT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       37249 84 -     53127 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCA--GCGGGACAG---AAC---TCA---C-A----AAGTT
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        4530 84 +      7159 TCC-A-AAC-TAT---AATGAGA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTC--GCA--GCGGGACAG---AAC---CCA---C-A----AAGTT
i Cercopithecus_nictitans.k141_3278028                   C 0 I 7
s Cercopithecus_petaurista.k141_807961                       12052 84 -     27947 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCA--GTGGGACAG---AAC---TCA---C-A----AAGTT
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         12025 84 +     17596 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCA--GCGGGACAG---AAC---TCA---C-A----AAGTT
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          1248 84 +     26000 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCA--GCTGGACAG---AAC---CCA---C-A----AAGTT
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            5959 61 -      6351 TTC-C-AAT-TGT---AATAAAA-ATTAAGCT---------------CA--AG-AA--AAATTTGAA-TGGCC---AC-AAT---AA--CTCTTT--GTG--------------------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 I 17
s Cheirogaleus_major.k141_333249                             19146 83 -     52598 TGC-A-AAC-TAT---AATGAAA-ATTAATCT---------------AT--GG-AA--GACTTG-GATTGGCC---AC-AGT---AA--CTCTTT--GCA--CCTAGATAG---GAC---CCA---C-A----AGTCT
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           14491 83 +     57038 TGC-A-AAC-TAT---AATGAAA-ATTAATCT---------------AC--CG-AA--GACTTG-GATTGGCC---AC-AGT---AA--CTCTTT--GCA--CCTAGACAG---GAC---CCA---C-A----AGTCT
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           8422 29 +     11226 TCA-G-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-------------------------------------------------------------------------------------
i Chiropotes_albinasus.k141_2813271                      C 0 I 841
s Chlorocebus_aethiops.ctg25                              18425988 84 -  18827391 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCA--GCTGGACAG---AAC---CCA---C-A----AAGTT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       12426 84 -     50209 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCA--GCTGGACAG---AAC---CCA---C-A----AAGTT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135419434 84 + 135778131 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCA--GCTGGACAG---AAC---CCA---C-a----aagtt
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 16324 83 +     19366 TTC-A-AAT-TGT---AAAAAAA-ATTAAGCT---------------AG--GG-AA--AAATTAGAA-TGGCC---AC-AAT---AA--ATCTTT--GTA--CCTGAGCAG---GAC---CCA---C-A----AGGTT
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            171423 83 +    839153 ttc-a-aat-tgt---aaaaaaa-attaagct---------------aG--GG-AA--AAATTAGAA-TGGCC---AC-AAT---AA--ATCTTT--GTA--CCTGAGCAG---GAC---CCA---C-A----AGGTT
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_172426              10726 60 -     10935 ------------------------------CT---------------AG--AG-AA--AATTTGGAA-TAGCT---GT-AGT---AA--TACTTA--AAA--CCTGGGCAG---GTA---CCA---C-A----AGGGT
i Chrysochloris_asiatica.ChrAsi_scaffold_172426          I 209 N 0
s Colobus_angolensis.KN981557.1                            1907950 84 +   2368649 TCC-A-AAC-TAT---AATGAAA-ATTGGGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAGCAA--TTCTTT--GCA--GCTGGACAG---AAC---CCA---C-a----aagtt
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199947626 84 + 200372422 TCC-A-AAC-TAT---AATGAAA-ATTGGGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAGCAA--TTCTTT--GCA--GCTGGACAG---AAC---CCA---C-A----AAGTT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              34488 84 +     84244 TAC-A-AAC-TAT---AATGAAA-ATTGGGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAGCAA--TTCTTT--GCA--GCTGGACAG---AAC---CCA---C-A----AAGTT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17547137 27 -  53390261 --------------------------------------------------------------------------------------------------------TGGGC--CA-GAC---CTATAAG-ACAATGTACT
i Condylura_cristata.JH655891.1                          I 5 I 21
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          12457 57 -     20389 TCC-AAAAT-TGT---AATGAA-AATTGAGCA---------------AG--AG-AA--GATTTGGAA-TGGCC---AC-AAT---AA--CTCT---------------------------------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 27
s Cricetomys_gambianus.CriGam_scaffold_18520                 48061 46 +     63868 -----------------------------------------------AC--A-GAAA-AC--AG-GG-TAGTCAC-AA-AA----------CTCT--GCA--TCTAGGTAG---GCC---CCA---------------
i Cricetomys_gambianus.CriGam_scaffold_18520             I 7 C 0
s Cricetulus_griseus.LT883664.1                           11665405 40 + 224834208 ----------------------------------------------------------G-TTAG-GG-TGGTCAC-AA-AA----------CTCT--GCA--TCCAAATAA---GCC---ACA---------------
i Cricetulus_griseus.LT883664.1                          I 14 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               1456 24 -     19598 --------------------------------------------------------------------------------------------------TA--CCTGAAC--AA-GAA---CTA---A-A----ATACT
i Crocidura_indochinensis.CroInd_scaffold_37019          n 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             26951 80 -     87169 TTC-A-AAC---T---AATGAAA-ATTGAGCT---------------AG--AG-AA--GATTTGGAA-TG-CC---AT-AAT---AA--CTCTTT--GCA--CCTGGGCAG---AAC---CTG---T-A----AGACT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    835213 81 +   1526836 TTC-G-AGC-GGT---AATGAAA-ATTGATCT---------------AG--GA-AA--AGTTTC-AA-TGGCC---AA-AAT---AA--TTGCCT--GCA--CCTGTACAG---GAC---CCA---A-G-----TGCT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12535353 83 -  12879189 TGC-A-AAC-TAT---AATGAAA-ATTAAGCT---------------AC--AG-AA--GATTTG-GATTAGCC---AC-AAT---AA--CTCTTT--GCA--CCTGGACAG---GAC---CCA---C-A----AGTCT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  671749 84 +   1390856 TCC-AAAAC-TGG---AAGGAAA-ATTGAGCT---------------AG--AG-AA--GATTTGGAA-TGGCC---AC-ACT---AA--CTCTTT--GTA--CCGGGGTAA---GAC---CTA---C-A----AGACT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    4505 84 +    198055 TCC-AAAAC-TGT---AATGAAA-ATTGAGCT---------------AG--AG-AA--GATTTGGAA-TGGCC---AC-ACT---AA--CTCTTT--GTA--CCGGGGTAT---GAC---CTA---C-A----AGACT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Echinops_telfairi.JH980293.1                            48777943 83 + 111700974 TAC-A-AGC-TGT---AATGAAA-ATTGATCT---------------AG--AG-AA--AATTTGGAA-TAACT---GC-AAT---AA--TTCTTT--GAA--CCTGGGCAA---CAC---TCA---C-A----AGGTT
i Echinops_telfairi.JH980293.1                           N 0 C 0
s Eidolon_helvum.KE759718.1                                   8994 57 +     11740 TCC-AAAAC-TGT---AATGAAA-ATTGAGCA---------------AG--AG-AA--GATTTGGAA-CGGCC---AC-AAT---AA--CTCT---------------------------------------------
i Eidolon_helvum.KE759718.1                              C 0 I 14
s Ellobius_lutescens.LOEQ01008920.1                          17580 69 -    110024 ----T-AAC-CAT---AATGAAA-ATTGAGCT---------------AC--A-GAAA-A-CTAG-GG-TGGTCAC-AA-AA----------CCCT--GCA--GCCACCTAG---GCC---CCA---------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01109367.1                            3634 69 -      6299 ----T-ACC-CAT---AATGAAA-ATTGAGCT---------------AC--A-GAAA-A-TTAG-GG-TGGTCAC-AA-AA----------CTCT--GAA--GCCACCTAG---GCC---CCA---------------
i Ellobius_talpinus.LOJH01109367.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16327788 82 -  41312741 TTT-A-AAC-TAT---AGTGATA-ATTGAACT---------------GA--AG-AA--GATTTGGAA-TG-AC---AC-AAT---AA--CTTTCT--GCA--CCTGGGCAG---TAC---CTA---C-A----AGGCA
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1281804 87 +   4378816 TCT-AAAAT-TGT---AATGAAA-ATTGAgctcaagaagattgaaatcg--aG-AA--GATTTGGAA-CGG-C---AC-ACT---AA--CCCTTC--GTA--CTGGGGCAG---GA----------------------
i Equus_asinus.JREZ01000139.1                            C 0 I 2
s Equus_caballus.CM000403.2                               18529625 87 -  39960074 TCT-AAAAT-TGT---AATGAAA-ATTGAgctcaagaagattgaaatcg--aG-AA--GATTTGGAA-CGG-C---AC-ACT---AA--CCCTTC--GTA--CTGGGGCAG---GA----------------------
i Equus_caballus.CM000403.2                              C 0 I 2
s Equus_przewalskii.KK951119.1                               31640 87 +    498745 TCT-AAAAT-TGT---AATGAAA-ATTGAgctcaagaagattgaaatcg--aG-AA--GATTTGGAA-CGG-C---AC-ACT---AA--CCCTTC--GTA--CTGGGGCAG---GA----------------------
i Equus_przewalskii.KK951119.1                           C 0 I 2
s Erythrocebus_patas.Contig38                             21202624 84 -  21539334 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCA--GCTGGACAG---AAC---CCA---C-A----AAGTT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              11838 83 -     14127 TGC-A-AAC-TAT---AATGAAA-ATTAATCT---------------AC--AG-AA--GACTTG-GATTGGCC---AC-AGT---AA--CTCTTT--GCA--CCTGGACAG---GAC---CCA---C-A----AGTAC
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                4536 83 -     16928 TGC-A-AAC-TAT---AATGAAA-ATTAATCT---------------AC--AG-AA--GACTTG-GATTGGCC---AC-AGT---AA--CTCTTT--GCA--CCTGGACAG---GAC---CCA---C-A----AGTAC
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              13573 83 -     25546 TGC-A-AAC-TAT---AAAGAAA-ATTAATCT---------------AC--AG-AA--GACTTG-GATTGGCC---AC-AGT---AA--CTCTTT--GCA--CCTGGACAG---GAC---CCA---C-A----AGTCC
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            10763 83 +     26330 TGA-A-AAC-TAT---AATGAAA-ATTAATCT---------------AC--AG-AA--GACTTG-GATTGGCC---AC-AGT---AA--CTCTTT--GCA--CCTGGACAG---GAC---CCA---C-A----AGTCC
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 12002 83 +     23973 TGC-A-AAC-TAT---AATGAAA-ATTAATCT---------------AC--AG-AA--GACTTG-GATTGGCC---AC-AGT---AA--CTCTTT--GTA--CCTGGACAG---GAC---CCA---C-A----AGTAC
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                10763 83 +     75513 TGA-A-AAC-TAT---AATGAAA-ATTAATCT---------------AC--AG-AA--GACTTG-GATTGGCC---AC-AGT---AA--CTCTTT--GCA--CCTGGACAG---GAC---CCA---C-A----AGTCC
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  8705 83 +     97555 TGC-A-AAC-TAT---AATGAAA-ATTAATCT---------------AC--AG-AA--GACTTG-GATTGGCC---AC-AGT---AA--CTCTTT--GCA--CCTGGACAG---GAC---CCA---C-A----AGTAC
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            11641 83 +     26496 TGC-A-AAC-TAT---AATGAAA-ATTAATCT---------------AC--AG-AA--GACTTG-GATTGGCC---AC-AGT---AA--CTCTTT--GCA--CCTGGACAG---GAC---CCA---C-A----GGTCC
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  2238 83 -     17153 TGC-A-AAC-TAT---AATGAAA-ATTAATCT---------------AC--AG-AA--GACTTG-GATTGGCC---AC-AGT---AA--CTCTTT--GCA--CCTGGACAG---GAC---CCA---C-A----AGTAC
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              11814 83 +    111500 TGC-A-AAC-TAT---AATGAAA-ATTAATCT---------------AC--AG-AA--GACTTG-GATTGGCC---AC-AGT---AA--CTCTTT--GCA--CCTGGACAG---GAC---CCA---C-A----AGTAC
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20235645 82 + 206538554 TTC-A-AAC-TGT---AATGAAA-ACTGAACT---------------AG--AG-AA--GATCTGGAA-TG-CC---AC-AAT---AA--CTCTTT--GCA--CCTGGGCAG---AAC---CTA---T-A----AGACT
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20194488 82 + 205367284 TTC-A-AAC-TGT---AATGAAA-ACTGAACT---------------AG--AG-AA--GATCTGGAA-TG-CC---AC-AAT---AA--CTCTTT--GCA--CCTGGGCAG---AAC---CTA---T-A----AGACT
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  8002 82 -     36744 TTC-A-AAC-TGT---AATGAAA-ACTGAACT---------------AG--AG-AA--GATCTGGAA-TG-CC---AC-AAT---AA--CTCTTT--GCA--CCTGGGCAG---AAC---CTA---T-A----AGACT
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     424373 83 -    453645 TTC-A-AAC-TAT---TGTGAAA-ATTAGGCT---------------AT--AA-AA--ACTTTA-GAATGCCC---AT-AAT---AA--TTCTTT--GCA--CCTAGACAG---GAA---CCA---C-A----AGTTT
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             2080 83 +     11339 TTC-A-AAC-TAT---TGTGAAA-ATTAGGCT---------------AT--AA-AA--ACTTTA-GAATACCC---AT-AAT---AA--TTCTTT--GCA--CCTAGACAG---GAA---CCA---C-A----AGTTT
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1959596                            5888 83 +      6795 TCT-A-AAC-TAT---TGTGAAA-ACTAGGCT---------------AT--AA-AA--ACTTTA-GAATAGCC---AT-AAT---AA--TTCTTT--GTA--CCTAGACAG---GAC---CCA---C-A----AGTTT
i Galagoides_demidoff.k141_1959596                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_197845               2106 83 -      3123 TCC-A-AAC-TGT---AATGAAA-ATTGAACT---------------AA--AG-AA--GATTTG-AACTGGCC---AC-AAT---AA--CTCTTT--GAA--CCTAGACAG---GAC---CCA---C-A----AGGCT
i Galeopterus_variegatus.GalVar_scaffold_197845          C 0 C 0
s Gorilla_beringei.k141_3596273                              13392 84 -     32273 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGGCC---AT-AATAATAA--TTCTCT--GCA--GCTGGACAG---AAC---CCA---C-A----AGGTT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186335540 84 + 186649187 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGGCC---AT-AATAATAA--TTCTCT--GCA--GCTGGACAG---AAC---CCA---C-A----aggtt
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           4892 83 -     19426 TGC-A-AAC-TAT---AATGAAA-ATTAATCT---------------AC--AG-AA--GACTTG-GATTGGCC---AC-AAT---AA--CTCTTT--GCA--CCTGGACAG---GAC---CCA---C-A----AGTCT
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             10041 83 -     15286 TGC-A-AAC-TAT---AATGAAA-ATTAATCT---------------AC--AG-AA--GACTTG-GATTGGCC---AC-AAT---AA--CTCTTT--GCA--CCTGGACAA---GAT---CCA---C-A----AGTCT
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             11680 83 +     18253 TGC-A-AAC-TAT---AATGAAA-ATTAATCT---------------AC--AG-AA--GACTTG-GATTGGCC---AC-AAT---AA--CTCTTT--GCA--CCTGGACAG---GAC---CCA---C-A----AGTCT
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         11781 83 -     41752 TGC-A-AAC-TAT---AATGAAA-ATTAATCT---------------AC--AG-AA--GACTTG-GATTGGCC---AC-AAT---AA--CTCTTT--GCA--CCTGGACAG---GAC---CCA---C-A----AGTCT
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         11619 83 -     16460 TGC-A-AAC-TAT---AATGAAA-ATTAATCT---------------AC--AG-AA--GACTTG-GATTGGCC---AC-AAT---AA--CTCTTT--GCA--CCTGGACAG---GAC---CCA---C-A----AGTCT
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               240796 80 +    327341 TTC-A-AGC---T---AATGAAA-ACTGAGCT---------------AG--AG-AA--GATTTGAAG-TG-CC---AC-AAT---AA--CTCTTT--ACA--CCTGGGTAG---AAC---CTT---T-A----AGACT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_403422                 155 55 -       893 ----------------------------------------------------G-AA--AATTTGGAA-TGGCA---GC-AAG---AA--CTCTTT--GAA--GCCAGGTAA---GAT---CCA---C-A----AGACT
i Heterohyrax_brucei.HetBruBak_scaffold_403422           N 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       110261 57 +   1711038 tcc-aaaac-tga---aatgaa-aattgagCA---------------AG--AG-AA--GATTTGGAA-TGGCC---AC-AAT---AA--CTCT---------------------------------------------
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 18
s Hipposideros_galeritus.HipGal_scaffold_29171               41684 57 +     43066 TCC-AAAAT-TGA---AATGAA-AATTGAGCA---------------AG--AG-AA--GATTTGGAA-TGGCC---AC-AAT---AA--CTCT---------------------------------------------
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 I 85
s Hoolock_leuconedys.ctg274                                    432203 84 +    630532 TCC-A-AAC-TGT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGGTT---AC-AATAATAA--TTCTCT--GCA--GCTGGACAG---AAC---CCA---C-A----AGGTT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  42926 82 +     55795 TTC-A-AAC-TGT---AATGAAA-ATTGAGCT---------------AG--AG-AA--GATTTGGAA-TG-CC---AA-AAT---AA--CCCTTT--GCA--CCTGGGCAG---AAC---CTA---G-A----AGACT
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_307679                               15140 84 -     15490 TCC-A-AAC-TGT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGGCT---AC-AATAATAA--TTCTCT--GCA--GCTGGACAG---AAC---CCA---C-A----AGGTT
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              57146 84 +     67168 TCC-A-AAC-TGT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGGCT---AC-AATAATAA--TTCTCT--GCA--GCTGGACAG---AAC---CCA---C-A----AGGTT
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189540796 84 - 191637585 TCC-A-AAC-TGT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGGCT---AC-AATAATAA--TTCTCT--GCA--GCTGGACAG---AAC---CCA---C-A----AGGTT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3333690 84 -  11177569 TCC-A-AAC-TGT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGGCT---AC-AATAATAA--TTCTCT--GCA--GCTGGACAG---AAC---CCA---C-A----AGGTT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7518163 83 -   7955117 Ttt-g-aac-tga---aatgaaa-attaaact---------------ag--AG-AAA-ATTTGT-CC-TGGCT---AC-TGT---AA--CTCTTT--GCA--CTTGGATAA---GAC---CAA---TGG-----GACT
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   20586 83 +     31101 TGC-A-AAC-TAT---AATGAAA-ATTAATCT---------------AT--GG-AA--GACTTG-GATTGGCC---AC-AGT---AA--CTCTTT--GCA--TCTGGACGG---GAC---CCA---C-A----AGTCT
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15522143 83 -  30322482 TGC-A-AAC-TAT---AATGAAA-ATTAATCT---------------AC--AG-AA--GACTTG-GATTGGCC---AC-AAT---AA--CTCTTT--GCA--CCTGGACAG---GAC---CCA---C-A----AGTCT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        5138 84 +     64341 TCA-G-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GAGCTC-AATTGGCT---AT-CATAATAA--CTCTCT--GCA--GCTGGACAG---ACC---CAA---C-A----AAGCT
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           2199 84 +      4941 TCA-G-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GAGCTC-AATTGGCT---AT-CATAATAA--CTCTCT--GCA--GCTGGACAG---ACC---CAA---C-A----AAGCT
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        5067 82 +     35603 TCA-G-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GAGCTC-GATTGGCT---AT-CATAATAA----CTCT--GCA--GCTGGACAA---ACC---CAA---C-A----AAGCT
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    26538 84 +     38576 TCA-G-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GAGCTG-GATTGGCT---GT-AATAATAA--CTCTCT--GCA--GCTGGACAG---ACA---CAG---C-A----AAGCT
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         23235 84 +     66356 TCA-G-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GAGCTG-GATTGGCT---GT-GATAATAA--CTCTCT--GCA--GCTGGACAG---ACA---CAG---C-A----AAGCT
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          9024 83 -     23766 TGC-A-AAC-TAT---AATGAAA-ATTAATCT---------------AC--GG-AA--GACTTG-GATTGGCC---AC-AGT---AA--CTCTTT--GCA--CCAGGACAG---GAC---CCA---C-A----AGTCT
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             26971 83 +     45836 TGC-A-AAC-TAT---AATGAAA-ATTAATCT---------------AC--GG-AA--GACTTG-GATTGGCC---AC-AGT---AA--CTCTTT--GCA--CCAGGACAG---GAC---CCA---C-A----AGTCT
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_320948                          1195 83 -      1719 TGC-A-AAC-TAT---AATGAAA-ATTAATCT---------------AC--GG-AA--GACTTG-GATTGGCC---AC-AGT---AA--CTCTTT--GCA--CCAGGACAG---GAC---CCA---C-A----AGTCT
i Lepilemur_ruficaudatus.k141_320948                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      25026 83 +     54090 TGC-A-AAC-TAT---AATGAAA-ATTAATCT---------------AC--AG-AA--GACTTG-GATTGGCC---AC-AGT---AA--CTCTTT--GCA--CCAGGACAG---GAC---CCA---C-A----AGTCT
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.APMU01168965.1                       568 82 -      1094 TTC-A-AAC-TAT---AATGAAT-ATTGAACT---------------GG--AG-AA--GATTTGGAA-TG-CC---AC-AAT---AA--CT--CTTTGCA--CCTGGGCAG---AAC---CTA---T-A----AGGGT
i Leptonychotes_weddellii.APMU01168965.1                 C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     4026 39 -     14121 TTT-A-ACT-TGT---ATTGAAA-ATGGAGCT---------------AT--AG-AA--ATTTTG-AA-----------------------------------------------------------------------
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 22
s Lophocebus_aterrimus.ctg367                              1434561 84 +   1826925 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCG--GTGGGACAG---AAC---CCA---C-A----AAGTT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            3831 81 +     11245 TCC-A-AAC-TAT---AGTGAAA-ATTAGGCC---------------AT--AA-AA--GCTTTA-AAATAGCT---AT-AAT---AA--T--TTT--GCA--TCTAGACAG---AAC---CCA---C-A----AGTTT
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1002669 81 +   6120653 TCC-A-AAC-TAT---AGTGAAA-ATTAGGCC---------------AT--AA-AA--GCTTTA-AAATAGCT---AT-AAT---AA--T--TTT--GCA--TCTAGACAG---AAC---CCA---C-A----AGTTT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4215444 83 -  43346337 tTC-A-AAC-TGT---AATGAAA-ATTGTGCT---------------AG--AG-AA--AATTTGGAA-TGGCT---GC-AAA---AA--TTCTTT--GAA--CCTGGGCAA---GAC---CCA---C-A----AGGGC
i Loxodonta_africana.GL010049.1                          I 448 C 0
s Lycaon_pictus.CM007581.1                                17953726 82 -  59628241 ttc-a-aat-tgt---aatgaaa-attgagct---------------gg--ag---aagatttggaa-tg-cc---ac-aat---aa--ctcttt--gca--cctgggtag---aac---cta---t-a----aggct
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               4374 84 +     40492 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCA--GCGGGACAG---AAC---CCA---C-A----AAGTT
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59673636 84 +  60120075 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCA--GCGGGACAG---AAC---CCA---C-A----AAGTT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 10130 84 -     26193 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCA--GCGGGACAG---AAC---CCA---C-A----AAGTT
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            77934 84 -    114318 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCA--GCGGGACAG---AAC---CCA---C-A----AAGTT
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  3633 84 -     23192 TCC-A-AAG-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCA--GCGGGACAG---AAC---CCA---C-A----AAGTT
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                13093 84 -     29190 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCA--GCGGGACAG---AAC---CCA---C-A----AAGTT
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  21661 84 +     37952 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCA--GCGGGACAG---AAC---CCA---C-A----AAGTT
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186836749 84 + 187317192 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCA--GCGGGACAG---AAC---CCA---C-a----aagtt
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25455312 84 -  25927173 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCA--GCGGGACAG---AAC---CCA---C-a----aagtt
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  77510 84 +     89720 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCA--GCGGGACAG---AAC---CCA---C-A----AAGTT
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 4507 84 +     20474 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCA--GCGGGACAG---AAC---CCA---C-A----AAGTT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   4309 84 -     14993 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTCACAA--TTCTTT--GCA--GCGGGACAG---AAC---CCA---C-A----AAGTT
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  327179 84 -    668171 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCA--GCGGGACAG---AAC---CCA---C-A----AAGTT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 2619 84 -     24072 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCA--GCGGGACAG---AAC---CCA---C-A----AAGTT
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               23248 84 -     45290 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCA--GCGGGACAG---AAC---CCA---C-A----AAGTT
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 89068 56 +     94391 TCC-AAAAC-TGT---AATGAA--ATTGAGCA---------------AG--AG-AA--GATTTGGAA-TGGCC---AC-AAT---AA--CTCT---------------------------------------------
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 14
s Mandrillus_leucophaeus.scaffold280                      23934835 84 -  24302211 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCG--GCGGGACAG---AAC---CCA---C-A----AAGTT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               348968 84 +    752769 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCG--GCGGGACAG---AAC---CCA---C-A----AAGTT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              17913 85 +    737560 TCC-A-AAC-TGT---AGTGAAA-ACTGAGCC---------------AC--AG-AA--GATTTGAAA-TGGCC---AC-AAT---AACACTCCTT--ATG--CCTGTGCAG---GAC---CTA---T-A----AGACT
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              49299 83 -    317179 TCC-A-AAC-TGT---AGTGAAA-ACTGAGCC---------------AC--AG-AA--GATTTGAAA-TGGCC---AC-AAT---AA--CTCCTT--ATG--CCTGTGCAG---GAC---CTA---T-A----AGACT
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33100471 83 -  40650429 TTt-g-aac-tga---aatgaaa-attaaact---------------ag--AG-AAA-ATTTGT-CC-TGGCT---AC-TGT---AA--CTCTTT--GCA--TTTGGATAA---GAC---CAA---TGG-----GACT
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         8793 57 -    207569 TCC-AAAAT-GGT---AATGAA-AGTTGAGCA---------------AG--AG-AA--GATTTTAAA-TGGCC---TC-AGT---AA--CGCT---------------------------------------------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 27
s Mellivora_capensis.MelCap_flattened_line_69365              8506 82 +     13704 TTT-A-AAC-TAT---AATGATA-ATTGAACT---------------GA--AG-AA--GATTTGGAA-TG-GC---AC-AAT---AA--CTTTCT--GCA--CCTGGGCAG---TCC---CTA---C-A----AGTCT
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 30655 70 +    140813 ----T-AAC-CAT---AATGAAA-ATTGAGCT---------------AT--A-TAAA-ACTTAG-GG-TGGTCAT-GA-AA----------ATCT--ATA--TCCAGATAG---GTC---TCA---------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12180451 60 -  29670104 ----t-aac-cat---aatGAAA-ATTGAGCT---------------AC--A-GAAAAG-GTAG-GG-TGGTCAC-AA-AA----------CTCT--ACA--TCCAG-------------------------------
i Mesocricetus_auratus.KB708134.1                        C 0 I 9
s Mico_argentatus.k141_1239457                                3320 84 -      7380 TCA-G-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GAGCTG-GATTGGCC---AT-AATAATAA--CTCTCT--GCA--GCTGGACAG---ACC---CAA---C-A----AAGCT
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               2386 84 +     18990 TCA-G-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GAGCTG-GATTGGCC---AT-AATAATAA--CTCTCT--GCA--GCTGGACAG---ACC---CAA---C-A----AAGCT
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      3325 84 -      7356 TCA-G-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GAGCTG-GATTGGCC---AT-AATAATAA--CTCTCT--GCA--GCTGGACAG---ACC---CAA---C-A----AAGCT
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18289530 83 -  93316391 TGC-A-AAc-tat---aatgaaa-attaatct---------------aT--GA-AA--GACTTG-GATTGGCC---AC-AGT---AA--CTCTTT--GCA--CCTGGACAG---GAC---CCA---C-A----Agtct
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    17783 83 -    145209 TAC-A-AGC-TGT---AATGGAA-ATTGATCT---------------AG--AG-AA--AAATTGGAA-TAGCT---GC-AAT---AA--TTCTTT--GAA--CCTGAGCAA---CAC---TCA---C-A----GGGTT
i Microgale_talazaci.MicTal_scaffold_6613                I 173 C 0
s Microtus_ochrogaster.CM001695.1                         11258631 69 -  27267610 ----T-AAC-CAT---AATGAAT-ATTGAGCT---------------AC--A--AAAAG-CTAG-GG-TGGTCAC-AA-AA----------CTCT--GCA--GCCAGCTAG---GCC---CCA---------------
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miopithecus_ogouensis.k141_534055                           6555 84 -     28506 TCC-A-AAC-TAC---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCA--GCTGGACAG---AAC---CCA---C-A----AAGTT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         3982 82 -      8324 TTC-A-AAC-TAT---AATGAAT-ATTGAACT---------------GG--AG-AA--GATTTGGAA-TG-CC---AC-AAT---AA--CT--CTTTGCA--CCTGGGCAG---AAC---CTA---T-A----AGGGT
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      7103 83 -     37649 TGC-A-AAC-TAT---AATGAAA-ATTAATCT---------------AT--GG-AA--GACTTG-GATTGGCC---GC-AGT---AA--CTCTTT--GTA--CCTGGACTG---GGC---CCA---C-A----AGTCT
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 139772 72 -    366855 ----------------AATGAAA-ACTGAACT---------------AG--AG-AA--GATTTGGAA-TG-CC---AC-AAT---AA--CTCTTT--GCA--CCTGGACAA---GAC---CTA---C-G----ACACT
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 5 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   33903 80 +     37127 TAC-A-AAC---T---AATGAAA-ACTGAGCT---------------AG--AG-AA--GATTTGGAA-TG-CC---AC-AAT---AA--CTCTTT--ACA--CCTGGGTAG---AAC---CTT---T-A----AGACT
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Mus_caroli.LT608237.1                                   84359068 70 - 120012414 ----T-AAC-CAT---AATGAAA-ATTGAGCT---------------AC--A-GAAA-ACTTAG-AG-TGGTCAC-AA-AC----------CCTT--GGA--TCCAAACAT---GTC---CCA---------------
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87648052 70 - 129401213 ----T-AAC-CAT---AATGAAA-ATTGAGCT---------------AC--A-GAAA-ACTTAG-GG-TGGTCAC-AA-AC----------CCTT--GGA--TCCAAACAT---GTC---CCA---------------
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31352714 70 -  89631738 ----T-AAC-CAT---AATGAAA-ATTGAGCT---------------AC--A-GAAA-ACTTAC-AG-TGGTCAC-AA-AA----------CTCT--GGA--TCCAAACAG---GTC---CCA---------------
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90750130 70 - 130317789 ----T-AAC-CAT---AATGAAA-ATTGAGCT---------------AC--A-GAAA-ACTTAG-GG-TGGTCAC-AA-AC----------CCTT--GGA--TCCAAACAT---GTC---CCG---------------
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               299681 82 -  14710649 TTT-A-AAC-TAC---AATGATA-ATTGAACT---------------GA--AG-AA--GATTTGGAA-TG-GC---AC-AAT---AA--CTTTCT--GCA--CTTGGGCAG---TAC---CTA---C-A----AGGCT
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187246 84 +    196477 TTC-A-AAT-TAT---AATAAAA-ATTAAGCT---------------CG--GA-AAA-AAATTAGAA-ATGTC---AC-AAT---AA--TTCTTT--GTA--CCTAAGCAG---GAC---CTA---C-A----AGGCT
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nasalis_larvatus.k141_413338                               12551 84 +     21681 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---CT-AGTAACAA--TTCTTT--GCA--GCTGGACAG---AAC---CCA---C-A----AAGTT
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9147984 82 -   9404916 TTC-A-AAT-TGT---AATGAAA-ATTGAGCT---------------AG--AG-AA--GATTTGGAA-TG-CC---AC-AAT---AA--CTCTTT--GCA--CCTGGGTAG---AAC---CTA---T-A----AGGCT
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102577592 83 - 196305487 TCC-A-AAC-CAT---AGTGAAA-ATTAGGCC---------------AT--AA-AA--TCTTTA-GAATAGCC---GT-AAT---AA--TTCTTT--GCA--CCTAGACAG---AAC---CCA---C-A----AGTTT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             5278 83 +      8486 TCC-A-AAC-CAT---AGTGAAA-ATTAGGCC---------------AT--AA-AA--TCTTTA-GAATAGCC---GT-AAT---AA--TTCTTT--GCA--CCTAGACAG---AAC---CCA---C-A----AGTTT
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105748019 83 + 199412804 TCC-A-AAC-CAC---AGTGAAA-ATTAGGCC---------------AT--AA-AA--TCTTTA-GAATAGCC---AT-AAT---AA--TTCTTT--GCA--CCTAGACAG---AAC---CCA---C-A----AGTTT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1361111 39 +   3988456 TTC-A-ACC-TAT---AATGAAA-ATTGAGTT---------------AC--AG-AA--AATTTG-AA-----------------------------------------------------------------------
i Ochotona_princeps.JH802162.1                           C 0 I 21
s Odobenus_rosmarus.KB229312.1                              505132 80 -   2017862 TTC-A-AAC-TAT---AATGAAT-ATTGAACT---------------GG--AG-AA--GATTTGGAA-TG-TC---AC-AAT---AA--CT--CT--GTA--CCTGGGCAG---AAC---CTA---T-A----AGGGT
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   22207 59 +     28053 -------------------GAAA-ATTGAGCT---------------AC--A-GAAA-A-CTAG-GG-TGGTCAC-AA-AA----------CTCT--ACA--GCCAGCTAG---GCC---CCA---------------
i Ondatra_zibethicus.OndZib_scaffold_46174               I 1 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    77283 65 +    102263 ----A-AAC-CCT---AGTGAAA-ACTGAGCT---------------GC--A-GAAA-ACCTAG-GG-CAGTCAC-AA-AA----------CTCT--GCA--GCT-----G---GCC---CCA---------------
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67144871 39 + 174332312 TTC-A-ACG-TAT---AATGAAA-ATGGAGTT---------------AT--AG-AA--ATTTTG-AA-----------------------------------------------------------------------
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 22
s Otocyon_megalotis.JAEUCK010005147.1                       460740 78 -    559221 TTC-A-AAT-TGT---GATGAAA-ATTGAGCT---------------GG--AG-AA--GATTTGGAA-TG-CC---AC-AAT---AA--CT------GCA--CCTGGGTAG---AAC---CTA---t-a----aggct
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 212
s Otolemur_crassicaudatus.k141_222918                         1915 83 +      8798 TTC-A-AAC-TAT---TGTGAAA-ATTAGGCT---------------AT--AA-AA--ACTTTA-GAATAGCC---AT-AAT---AA--TTCTTT--GCA--CCTAGACAG---GAC---CCA---C-A----AGTTT
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             694079 83 -   1103335 TTC-A-AAC-TAT---TGTGAAA-ATTAGGCT---------------AT--AA-AA--ACTTTA-GAATAGCC---AT-AAT---AA--TTCTTT--GCA--CCTAGACAG---GAC---CCA---C-A----AGTTT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    41489 84 +     80009 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGGCC---AT-AATAATAA--TTCTCT--GCA--GCTGGACAG---AAC---ACA---C-A----aggtt
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03001836.1                             27413 84 +     51860 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGGCC---AT-AATAATAA--TTCTCT--GCA--GCTGGACAG---AAC---CCA---C-A----aggtt
i Pan_troglodytes.NBAG03001836.1                         I 324 I 68
s Panthera_onca.PanOnc_flattened_line_3271                  149653 82 +    230217 TTC-A-AAT-TGT---AATGAAA-ATTGAACT---------------AG--AG-AA--CATTTGGAA-TG-CC---AC-AAT---AA--CTCTTT--GCA--CCTGGGCAG---AAC---CTA---T-A----AGACT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                262859 82 +  18783137 TTC-A-AAC-TGT---AATGAAA-ATTGAACT---------------AC--AG-AA--CATTTGGAA-TG-CC---AC-AAT---AA--CTCTTT--GCA--CCTGGGCAG---AAC---CTA---T-A----AGACT
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4719496 82 -   8748460 TTC-A-AAC-TGT---AATGAAA-ATTGAACT---------------AG--AG-AA--CATTTGGAA-TG-CC---AC-AAT---AA--CTCTTT--GCA--CCTGGGCAG---AAC---CTA---T-A----AGACT
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183440589 84 + 183742232 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCG--GCGGGACAG---AAC---CCA---C-a----aagtt
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             4282 84 +     20448 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCG--GCGGGACAG---AAC---CCA---C-A----AAGTT
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20561088 84 +  20919399 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCG--GCGGGACAG---AAC---CCA---C-A----AAGTT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   3026 84 +     41871 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCG--GCGGGACAG---AAC---CCA---C-A----AAGTT
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     6312 84 +     27711 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCG--GCGGGACAG---AAC---CCA---C-A----AAGTT
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  6391 84 +      9205 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCG--GCGGGACAG---AAC---CCA---C-A----AAGTT
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11117 82 -     78924 TTC-C-AAG-TAT---AATGAAA-ATTGAGCT---------------AG--AG-AA--TATTTAGAA-GG-CC---AC-AAT---AA--CTCTCT--GCA--CCTGGGCAG---AAC---CTA---T-A----AGACT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 23
s Perodicticus_ibeanus.k141_855320                            8044 83 +     13100 TTC-A-AAC-TAT---AGTGAAA-ATTAGGCT---------------AT--AA-AA--GCTTTA-GAATAGCC---AT-AAT---AA--TTCTTT--GCA--CCTAAATAG---AAC---CCA---C-A----AGTTT
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             6422 83 +     25941 TTC-A-AAC-TAT---AGTGAAA-ATTAGGCT---------------AT--AA-AA--GCTTTA-GAATAGCC---AT-AAT---AA--TTCTTT--GCA--CCTAAATAG---AAC---CCA---C-A----AGTTT
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18191881 70 -  18517816 ----T-AAC-CAT---AACAAAA-ATTGAGCT---------------GC--A-GAAA-ACTTAG-GG-TGGTCAC-AA-AA----------CTCT--GCA--GCCAGATAG---GCC---CTA---------------
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Piliocolobus_badius.k141_1234363                           41057 84 +     62158 TCC-A-AAC-TAC---AACGAAA-ACTGGGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAGCAA--TTCTTT--GCA--GCTGGACAG---AAC---CCA---C-A----AAGTT
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        35787 84 +     89929 TCC-A-AAC-TAC---AACGAAA-ACTGGGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAGCAA--TTCTTT--GCA--GCTGGACAG---AAC---CCA---C-A----AAGTT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            37203 84 +     51399 TCC-A-AAC-TAC---AACGAAA-ACTGGGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAGCAA--TTCTTT--GCA--GCTGGACAG---AAC---CCA---C-A----AAGTT
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14293441 84 -  14605196 TCC-A-AAC-TAC---AACGAAA-ACTGGGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAGCAA--TTCTTT--GCA--GCTGGACAG---AAC---CCa---c-a----aagtt
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189128520 84 + 189387572 TCC-A-AAC-TAT---AATGAAA-ATTGTGCT---------------AG--AG-----GATTTG-GATTGGCT---AC-AATAATAA--TTCTCT--GCA--GCTGGACAG---AAC---CCA---C-T----AGGTT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9568128 84 +   9816681 TCC-A-AAC-TAT---AATGAAA-ATTGTGCT---------------AG--AA-----GATTTG-GATTGGCT---AC-AATAATAA--TTCTCT--GCA--GCTGGACAG---AAC---CCA---C-T----AGGTT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               70714 84 -     81375 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---CT-AGTAACAA--TTCTTT--GCA--GCTGGACAG---AAC---CCA---C-A----AAGTT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              2534 84 +     19060 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---CT-AGTAACAA--TTCTTT--GCA--GCTGGACAG---AAC---CCA---C-A----AAGTT
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 11148 55 -     22811 ----------------------------------------------------G-AA--AATTTGGAA-TGGCA---GC-AAG---AA--CTCTTT--GAA--GCCAGGTAA---GAT---CCA---C-A----AGACT
i Procavia_capensis.ProCapCap_scaffold_85530             I 688 C 0
s Prolemur_simus.MPIZ01000396.1                            2594793 83 -   4620579 TGC-A-AAC-TAT---AATGAAA-ATTAATCT---------------AC--AG-AA--GACTTG-GATTGGCC---AC-AAT---AA--CTCTTT--GCA--CCTGGACAG---GAC---CCA---C-A----agtct
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     988784 83 +   2598838 TGC-A-AAC-TAT---AATGAAA-ATTAATCT---------------AT--AG-AA--GACTTG-GATTGGCC---AC-AGT---AA--CTCTTT--GCA--CCTGGACAG---GAC---CCA---C-A----Agtct
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          27094 83 +     38485 TGC-A-AAC-TAT---AATGAAA-ATTAATCT---------------AT--AG-AA--GACTTG-GATTGGCC---AC-AGT---AA--CTCTTT--GCA--CCTGGACAG---GAC---CCA---C-A----AGTCT
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             3254 83 +      4256 TGC-A-AAC-TAT---AATGAAA-ATTAATCT---------------AT--AG-AA--GACTTG-GATTGGCC---AC-AGT---AA--CTCTTT--GCA--CCTGGACAG---GAC---CCA---C-A----AGTCT
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          24607 83 +     35766 TGC-A-AAC-TAT---AATGAAA-ATTAATCT---------------AT--AG-AA--GACTTG-GATTGGCC---AC-AGT---AA--CTCTTT--GCA--CCTGGACAG---GAC---CCA---C-A----AGTCT
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           2790 83 -     24134 TGC-A-AAC-TAT---AATGAAA-ATTAATCT---------------AT--AG-AA--GACTTG-GATTGGCC---AC-AGT---AA--CTCTTT--GCA--CCTGGACAG---GAC---CCA---C-A----AGTCT
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        26611 83 -     67325 TGC-A-AAC-TAT---AATGAAA-ATTAATCT---------------AT--AG-AA--GACTTG-GATTGGCC---AC-AGT---AA--CTCTTT--GCA--CCTGGACAG---GAC---CCA---C-A----AGTCT
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           2847 83 -      6182 TGC-A-AAC-TAT---AATGAAA-ATTAATCT---------------AT--AG-AA--GACTTG-GATTGGCC---AC-AGT---AA--CTCTTT--GCA--CCTGGACAG---GAC---CCA---C-A----AGTCT
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             8297 70 -     21651 ----T-AAT-CAT---AATGAAA-ATTGAGCT---------------AC--A-TAAA-ACTTAG-GG-TGGTCAT-GA-AA----------TTCT--ATA--TCCAGATAG---GCC---CCA---------------
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            13158 84 -     21811 TTC-AAAAC-TGA---AATGAAG-GTTGAACT---------------AG--AG-AA--GATTTGGAA-TGGCC---AC-AAC---AC--CTCCTT--ATA--CCTGGACAG---GAC---CTA---A-G----GCACT
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         38698 82 +     42204 TTT-A-AAC-TAT---AATGATA-ATTGAACT---------------GA--AG-AA--GATTTGGAA-TG-GC---AC-AAT---AA--CTTTCT--GCA--CCTGGGCAG---TAC---CTA---C-A----AGGCT
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22975256 57 +  28871421 TCA-AAAAC-GGT---AATGAAA-ATTGAGCA---------------AG--AG-AA--GATTTGGAA-TGGCT---AC-AAT---AA--CTCT---------------------------------------------
i Pteropus_alecto.KB030862.1                             C 0 I 14
s Pteropus_vampyrus.KN525825.1                             1358345 57 +   4952924 TCA-AAAAC-GGT---AATGAAA-ATTGAGCA---------------AG--AG-AA--GATTTGGAA-TGGCT---AC-AAT---AA--CTCT---------------------------------------------
i Pteropus_vampyrus.KN525825.1                           C 0 I 14
s Puma_concolor.QAVW01001104.1                            20272773 82 -  38429054 TTC-A-AAC-TGT---AATGAAA-ATTGAACT---------------AG--AG-AA--GATCTGGAA-TG-CC---AC-AAT---AA--CTCTTT--GCA--CCTGGGCAG---AAC---CTA---T-A----AGACT
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             12549 84 -     91421 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---CT-AGTAACAA--TTCTTT--GCA--GCTGGACAG---AAC---CCA---C-A----AAGTT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7606675 84 +   7812017 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---CT-AGTAACAA--TTCTTT--GCA--GCTGGACAG---AAC---CCA---C-A----AAGTT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             12523 84 -     72585 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---CT-AGTAACAA--TTCTTT--GCA--GCTGGACAG---AAC---CCA---C-A----AAGTT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53568135 70 +  90668790 ----T-AAC-CAT---AATGAAA-ATTGAGCT---------------GC--A-GAAA-GCTTAG-AG-TGGTCAC-AA-AA----------CTCT--GGA--TCCAGACAG---GTC---CCA---------------
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             4230 84 -     11128 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---CT-AGTAACAA--TTCTTT--GCA--GCTGGACAG---AAC---CCA---C-A----AAGTT
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91233585 84 - 195417433 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---CT-AGTAACAA--TTCTTT--GCA--GCTGGACAG---AAC---CCA---C-a----aagtt
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7669234 84 +   7961872 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---CT-AGTAACAA--TTCTTT--GCA--GCTGGACAG---AAC---CCA---C-A----AAGTT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                86266 57 -     96226 TCC-AAAAC-TGT---AATGAAA-ATTGAGCA---------------AA--AG-AA--GATTTGGGA-TGGCC---AC-AAT---AA--CTCT---------------------------------------------
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 14
s Saguinus_bicolor.k141_2619299                               5447 84 -      8359 TCA-G-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GAGCTC-GATTGGCT---AT-CATCATAA--CTCTCT--GCA--GCTGGACAG---ACC---CAA---C-A----AAGCT
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            11755 84 -     13588 TCA-G-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GAGCTC-GATTGGCT---AT-CATAATAA--CTCTCT--GCA--GCTGGACAA---ACC---CAA---C-A----AAGCT
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              5393 84 -      6207 TCA-G-AAC-TAT---AATGAAA-ATTGGGCT---------------AG--AG-----GAGCTC-GATTGGCT---AT-CATCATAA--CTCTCT--GCA--GCTGGACAG---ACC---CAA---C-A----AAGCT
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               11120 84 +     13640 TCA-G-AAC-TAT---AATGAAA-ATTGGGCT---------------AG--AG-----GAGCTC-GATTGGCT---AT-CATCATAA--CTCTCT--GCA--GCTGGACAG---ACC---CAA---C-A----AAGCT
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               5983 84 +      8564 TCA-G-AAC-TAT---AATGAAA-ATTGGGCT---------------AG--AG-----GAGCTC-GATTGGCT---AT-CATCATAA--CTCTCT--GCA--GCTGGACAG---ACC---CAA---C-A----AAGCT
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209466261 84 + 209938924 TCA-G-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GAGCTC-GATTGGCT---AT-CATCATAA--CTCTCT--GCA--GCTGGACAG---ACC---CAA---C-A----AAGCT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 5474 81 -      9399 TCA-G-AAC-TAT---AATGAAA-ATTGGGCT---------------AG--AG-----GAGCTC-GATTGGCT---AT-CAT---AA--CTCTCT--GCA--GCTGGACAG---ACC---CAA---C-A----AAGCT
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 2620 84 +      3421 TCA-G-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GAGCTC-GATTGGCT---AT-CATAATAA--CTCTCT--GCA--GCTGGACAG---ACC---CAA---C-A----AAGCT
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119948797 84 - 121099817 TCC-G-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--GG-----GAGCTG-GATTGGCT---AC-CATAATAA--CTCTCT--GCA--GCTGGACAG---ACC---CAA---C-A----AAgct
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       21251 84 +     46362 TCC-G-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--GG-----GAGCTG-GATTGGCT---AC-CATAATAA--CTCTCT--GCA--GCTGGACAG---ACC---CAA---C-A----AAGCT
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               21346 84 +     45824 TCC-G-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--GG-----GAGCTG-GATTGGCT---AC-CATAATAA--CTCTCT--GCA--GCTGGACAG---ACC---CAA---C-A----AAGCT
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             37974 84 -     64574 TCT-G-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--GG-----GAGCTG-GATTGGCT---AC-CATAATAA--CTCTCT--GCA--GCTGGACAG---ACC---CAA---C-A----AAGCT
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                                980 84 -     23631 TCC-G-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--GG-----GAGCTG-GATTGGCT---AC-CATAATAA--CTCTCT--GCA--GCTGGACAG---ACC---CAA---C-A----AAGCT
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 21239 84 -     61129 TCC-G-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--GG-----GAGCTG-GATTGGCT---AC-CATAATAA--CTCTCT--GCA--GCTGGACAG---ACC---CAA---C-A----AAGCT
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    152193 32 -    313613 -------------------------------------------------------------------------------------------------GCA--CCTACGC--AA-GAC---CTACAAG-ACTTTTTACT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 10 I 17
s Semnopithecus_entellus.k141_11662                          17057 84 -     19888 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---CT-AGTAACAA--TTCTTT--GCA--GCTGGACAG---AAC---CCA---C-A----AAGTT
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      24260 84 +     39453 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---CT-AGTAACAA--TTCTTT--GCA--GCTGGACAG---AAC---CCA---C-G----AAGTT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            4786 84 +     27826 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---CT-AGTAACAA--TTCTTT--GCA--GCTGGACAG---AAC---CCA---C-A----AAGTT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             4306 84 -     19483 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---CT-AGTAACAA--TTCTTT--GCA--GCTGGACAG---AAC---CCA---C-A----AAGTT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      4368 84 +      7198 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---CT-AGTAACAA--TTCTTT--GCA--GCTGGACAG---AAC---CCA---C-A----AAGTT
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         12628 84 +     15514 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---CT-AGTAACAA--TTCTTT--GCA--GCTGGACAG---AAC---CCA---C-A----AAGTT
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11279 25 -     12148 ----T-AAG-CAT---AATGAAA-ATTGAGCT---------------AC--A--------------------------------------------------------------------------------------
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               2281 72 +   1910179 ------AAG-TGT---AATAAAA-ACTGAACT---------------AG--AG-AA--AATTCA-AA-GGACT---AG-AAT---GA--CT------GCA--CATGGTC-----GAC---TTA---A-A----TTACT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13649490 24 -  18376816 --------------------------------------------------------------------------------------------------TT--CTAGGAC---AGGCA---CTA---C-A----AAACT
i Sorex_araneus.JH798187.1                               I 801 C 0
s Spermophilus_dauricus.KZ294078.1                         1951359 83 -   3870691 Ttt-g-aac-tga---aatgaaa-attaaact---------------ag--AG-AAA-ATTTGT-CC-TGGCT---AC-TGT---AA--CTCTTT--GCA--CTTGGATAA---GAC---CAA---TGG-----GACT
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             29215 80 +     97271 TTC-A-AAC-TAT---AATGAAA-ATTGAACT---------------GG--AG-AA--GATTTGGAA-TG-GC---AC-AAT---AA--CTTTCT--GCA--CCTG--CAG---TAT---CTA---C-A----AGGCT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              16797 80 -    196729 TTC-A-AAC---T---AATGAAA-ACTGAGCT---------------AG--AG-AA--GATCTGGAA-TG-CC---AC-AAT---AC--CTCTTT--ACA--CCTGGGTAG---AAG---CTT---T-A----AGACT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.JH118708.1                                      33994 83 -     47482 TCC-A-AAT-TGT---AATGAAA-TTTGAGCT---------------AG--AG-AA--GATTTGGAA-TGGCC---AC-AGT---AT--GTCTTT--AAA--TCTGAGCAT---GAC---CTA---T-A----AGACT
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1090838 84 -   1523678 TCC-A-AAC-TGT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGGCT---AC-AATAATAA--TTCTCT--GCA--GCTGGACAG---AAC---CCA---C-A----AGGTT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 9095 84 +     41958 TCC-A-AAGTTCT---AATGAAA-ATTGAGCT---------------GG--AG-AA--GATTTGGAA-TGGCC---AC-AAT---AA--CTCTTT--GCC--CCTGGACAG---GAC---CTA---C-A----ACACT
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 70600 84 +    116680 TTC-G-AAT-TAT---AATAAAA-ATTAAGCT---------------CG--GA-AAA-AAAATAGAA-AGGTC---AC-AAT---AA--TTCTTT--GTA--CCTAAGCAG---GAC---CTA---C-A----AGGCT
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      117221 83 -    156842 TCC-AAAAC-CGC---AATGAAA-ATTGAGCT---------------AG--AG-AA--GATTTGGAA-TGACC---AC-ACT---AA--CTCTTT--GTA--C-TGGGCAG---GAC---CTA---C-A----AGACT
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    385674 83 +    539355 TCC-AAAAC-CGT---AATGAAA-ATTGAGCT---------------AG--AG-AA--GATTTGGAA-TGACC---AC-ACT---AA--CTCTTT--GTA--C-TGGGGAG---GAC---CTA---C-A----AGACT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               24160 83 +     70052 TTC-A-AAT-TAT---AATGAAA-ATTGAGCT---------------AG--AGGA---GATTTG-TATTGGCC---CT-AAT---AA--CTCTTT--GTA--CCTGGACAG---GAC---CCA---C-A----AGCCT
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_2029956                               3500 83 +      4644 TTC-A-AAT-TAT---AATGAAA-ATTGAGCT---------------AG--AGGA---GATTTG-TATTGGCC---CT-AAT---AA--CTCTTT--GTA--CCTGGACAG---GAC---CCA---C-A----AGCCT
i Tarsius_wallacei.k141_2029956                          C 0 C 0
s Theropithecus_gelada.CM009954.1                        186425954 84 + 186847797 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---GT-AGTAACAA--TTCTTT--GCG--GCGGGACAG---AAC---CCA---C-a----aagtt
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   3166 83 +      8208 TTC-A-AAC-TGT---AATAAAA-ACTAAGCT---------------TG--AGGA---AAATGTGAA-TGGCC---AC-AAT---GA--CTCTTT--GTA--GCTGAGCAG---GAC---CCA---C-G----AGGCG
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Trachypithecus_auratus.k141_722599                          8359 84 -     20410 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---CT-AGTAACAA--TTCTTT--GCA--GCTGGACAG---AAC---CCA---C-A----AAGTT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    12553 84 +     15221 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---CT-AATAACAA--TTCTTT--GCA--GCTGGACAG---AAC---CCA---C-A----AAGTT
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        8460 84 +     19930 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---CT-AGTAACAA--TTCTTT--GCA--GCTGGACAG---AAC---CCA---C-A----AAGTT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       4889 84 -     19997 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---CT-AATAACAA--TTCTTT--GCA--GCTGGACAG---AAC---CCA---C-A----AAGTT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            45009 84 -     60166 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---CT-AGTAACAA--TTCTTT--GCA--GCTGGACAG---AAC---CCA---C-A----AAGTT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        12481 84 -     27529 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---CT-AGTAACAA--TTCTTT--GCA--GCTGGACAG---AAC---CCA---C-A----AAGTT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     12423 84 -     18194 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---CT-AGTAACAA--TTCTTT--GCA--GCTGGACAG---AAC---CCA---C-A----AAGTT
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           6156 84 -     21137 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---CT-AATAACAA--TTCTTT--GCA--GCTGGACAG---AAC---CCA---C-A----AAGTT
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    4859 84 -     10723 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---CT-AATAACAA--TTCTTT--GCA--GCTGGACAG---AAC---CCA---C-A----AAGTT
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         4011 84 +      9834 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---CT-AATAACAA--TTCTTT--GCA--GCTGGACAG---AAC---CCA---C-A----AAGTT
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        22327 84 +     32220 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---CT-AGTAACAA--TTCTTT--GCA--GCTGGACAG---AAC---CCA---C-A----AAGTT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5936426 84 +   6242583 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---CT-AATAACAA--TTCTTT--GCA--GCTGGACAG---AAC---CCA---C-A----AAGTT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        5674 84 +     20839 TCC-A-AAC-TAT---AATGAAA-ATTGAGCT---------------AG--AG-----GATTTG-GATTGACT---CT-AGTAACAA--TTCTTT--GCA--GCTGGACAG---AAC---CCA---C-A----AAGTT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2153226 43 +   4065304 --------------------------------------------------------------------TGGCC---TT-AAT---AA--CTCTTT--ACA--CCTGGACAA---GAC---TCG---C-A----CGgct
i Tupaia_chinensis.KB320699.1                            I 35 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     6844 43 -     10553 --------------------------------------------------------------------TGGCC---TC-AAT---AA--CTCTTT--ACA--CCTGGACAA---GAC---TCA---C-A----AGGCT
i Tupaia_tana.TupTan_flattened_line_97126                I 35 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   52392 29 -     77625 -------------------------------------------------------------------------------------------------ACA--CTTGGTC--AA-GAC---CTA---A-GCTATTTACT
i Uropsilus_gracilis.UroGra_scaffold_12083               I 9 I 17
s Ursus_maritimus.KK499267.1                               4848909 82 -   5085361 TTC-A-AAC-TAT---AATGAAA-ATTGAACT---------------GG--AG-AA--GATTTGGAA-TG-CC---AC-AAT---AA--CTCTTT--GCA--CCTGGGAAG---AAC---CTA---T-A----AGGCT
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   9476 83 +     50397 TGC-A-AAC-TAT---AATGAAA-ATTAATCT---------------AC--GG-AA--GACTTG-GATTGGCC---AC-AAT---AA--CTCTTT--GCA--CCTGGAAAG---GAC---CCA---C-A----AGTCT
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              9530 83 +     24756 TGC-A-AAC-TAT---AATGAAA-ATTAATCT---------------AC--GG-AA--GACTTG-GATTGGCC---AC-AAT---AA--CTCTTT--GCA--CCTGGACAG---GAC---CCA---C-A----AGTCT
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5370360 84 -   5488506 TCC-AAAAC-TGC---AATGGAA-TCTGACCT---------------AG--AG-AA--GATTTGGAA-CGGCC---AC-AGT---AA--GTCTTA--AAG--CCAGGGCAT---GTC---CTA---C-A----AGACT
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  9394 82 -     43706 TTC-A-AAT-TGT---AATGAAA-ATTGAGCT---------------GG--AG-AA--GATTTGGAA-TG-CC---AC-AAT---AA--CTCTTT--GCA--CCTGGGTAG---AAC---CTA---T-A----AGGCT
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        22606 83 -     24430 TTC-A-AAC-TGT---AATGAAA-ATTGAACT---------------AG--AG-AAA-ATTTGT-TC-TGGCT---AC-AGT---AA--CTCTTT--GCA--CTTGGATAA---GAC---CAA---TGG-----GGCT
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          3626 80 +     86975 TTC-A-AAC-TAT---AATGAAT-ATTGAACT---------------GG--AG-AA--GATTTGGAA-TG-TC---AC-AAT---AA--CT--CT--GTA--CCTGGGCAG---AAC---CCA---T-A----AGGGT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Cebus_unicolor.k141_219506                                 14903  0 -     16904 I
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7577 1418 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1089466 1162 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            62283 174 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       4223 68 +     62944 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--AGA-----A-TACTAattaaatttataatacgtggaaaata---c--c--------aaatgc
s Acinonyx_jubatus.LLWD01001279.1                           825856 64 -   1699592 GTT------TACAA---------------TATCT-G-AAA-A-A--GT--T--ATAGA-----A-TAT---TTACGTCTATAATGCactgaaaata---c--t--------aaatgc
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     68420 34 +     87051 ---------T----GGACTG-TTTATAAA-ATTT-A-AGA-A-A--ATCATGT--AA------------------------------------------------------------
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9509113 60 -  29979442 ATT------TATAG---------------TATCt-g-aaa-a-a--gt--t--ataaa-----a-cattaattacatttataatatgctgaaaata---c-----------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 6
s Ailurus_fulgens.LNAC01001112.1                             77902 66 -    347723 ATT------TACAA---------------TATCt-g-aaa-a-a--gt--t--ataaa-----a-cagaaattacatttataat-tgctaaaaata---c--t--------aaatgc
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     72114 25 -     89534 ---------T------A-T-----A-A-T-ATTT-G-AGA-A-C--GGCATAG--TA------------------------------------------------------------
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 576
s Allenopithecus_nigroviridis.k141_3361533                   12141 68 -     52922 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAATATGGGgaaaata---c--c--------aaatgc
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         12075 76 -     28001 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAGTTAAATTTATAATATGGGGAAAATA---C--CCATATTATaaatgc
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          2521 76 -     18505 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAGTTAAATTTATAATATGGGGAAAATA---C--CCATATTATaaatgc
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           3370 76 -     12518 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAGTTAAATTTATAATATGGGGAAAATA---C--CCATATTATaaatgc
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                               972 68 -     27731 ATA------CATAA---------------TATTCGA-AAC-A-A--AG--TAT--AGA-----A-TATTAATTAAATTTACAATACGTGgaaaata---c--t--------gaatga
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                1097 68 +      3134 ATA------CATAA---------------TATTCGA-AAC-A-A--AG--TAT--AGA-----A-TATTAATTAAATTTACAATACGTGgaaaata---c--t--------gaatga
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               1232 68 -     45847 ATA------CATAA---------------TATTCGA-AAC-A-A--AG--TAT--AGA-----A-TATTAATTAAATTTACAATACGTGgaaaata---c--t--------gaatga
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                22438 68 +     25266 ATA------CATAA---------------TATTTGA-AAC-A-A--AG--TAT--AGA-----A-TATTAATTAAATTTACAATACGTGgaaaata---c--t--------gaatga
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           1622 68 +      2906 ATA------CATAA---------------TATTTGA-AAC-A-A--AA--TAT--AGA-----A-CATTAATTAAATTTACAATACGTGgaaaata---c--t--------gaatga
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            15735 68 -     18578 ATA------CATAA---------------TATTTGA-AAC-A-A--AA--TAT--AGA-----A-CATTAATTAAATTTACAATACGTGgaaaata---c--t--------gaatga
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              1122 68 +     47717 ATA------CATAA---------------CATTTGA-AAC-A-A--AG--TAT--AGA-----A-TATTAATTAAATTTACAATACGTGgaaaata---c--t--------gaatga
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             1252 68 -      3544 ATA------CATAA---------------TATTTGA-AAC-A-A--AG--TAT--AGA-----A-TATTAATTAAATTTACAATACGTGgaaaata---c--t--------gaatga
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             12472 68 +     50774 ATA------CATAA---------------TATTTGA-AAC-A-A--AG--TAT--AGA-----A-TATTAATTAAATTTACAATACGTGgaaaata---c--t--------gaatga
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  13095 68 -     33861 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--TAT--AGA-----A-TATTAATTAAATTTACAATACGTGgaaaata---c--c--------gaatga
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            13115 68 -     34016 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--TAT--AGA-----A-TATTAATTAAATTTACAATACGTGgaaaata---g--c--------gaatga
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4295512 68 -   5030052 ata------tataa---------------tatttga-aac-a-a--tg--tat--aga-----a-tattaattaaatttacaATACGTGGAAAATA---C--C--------GAATGA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             13117 68 -     34685 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--TAT--AGA-----A-TATTAATTAAATTTACAATACGTGgaaaata---c--c--------gaatga
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               26238 68 -     47192 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--TAT--AGA-----A-TATTAATTAAATTTACAATACGTGgaaaata---c--c--------gaatga
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      10091 26 +     20879 ATT-CATAAT--------------------ATTT-G-AAA-A-A--TG--TGC--AA------------------------------------------------------------
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 439
s Arctocebus_calabarensis.k141_2318572                        9486 63 +     14667 ATT------TAGAA---------------TGTTT-G-AAA-A-A--AT--AAT--AGA-----A-----AATGAAATTTGCAATATGCTAAAGAGT---C--C--------AAGTTC
i Arctocebus_calabarensis.k141_2318572                   C 0 I 7
s Avahi_laniger.k141_765380                                  51813 67 -     92717 ATT------TATAA---------------TATTT-G-AAA-A-A--GG--CAC--AGA-----A-CAGTAATtaaatttacaatatgctgaaaatt---c--c--------aaatgc
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              52442 67 +     85213 ATT------TATAA---------------TATTT-G-AAA-A-A--GG--CAC--AGA-----A-CAGTAATtaaatttacaatatgctgaaaatt---c--c--------aaatgc
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             2858 68 -     10423 ATA------TATAA---------------TATTTGA-AAC-G-G--TG--TAT--AGA-----A-TATTGATTAAATTTACAATACGTggaagata---c--c--------aaataa
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             22358 68 +     31915 ATA------TGTAA---------------TATTTGA-AAC-G-G--TG--TAt--aga-----a-tgttaattaaatttacaatacgtggaaaata---c--c--------aaatga
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            2828 68 +      5267 ATA------TATAA---------------TATTTGA-AAC-G-G--TG--TAT--AGA-----A-TATTGATTAAATTTACAATACGTGgaaaata---c--c--------gaatga
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23588042 68 - 189096842 ATA------TATAA---------------TATTTGA-AAC-G-G--TG--TAT--AGA-----A-TATTGATTAAATTTACAATACGTggaaaata---c--c--------gaatga
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              9572 68 -     12001 ATA------TATAA---------------TATTTGA-AAC-G-G--TG--TAT--AGA-----A-TATTGATTAAATTTACAATACGTGgaaaata---c--c--------gaatga
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10000957 64 -  17673402 ATT------AACAA---------------TACAT-G-AAA-A-A--GA--T----AG------a-tattaattaaatgtataatatcctgaaaata---t--c--------aaaaac
i Camelus_bactrianus.KN276810.1                          C 0 I 28
s Camelus_dromedarius.KN272107.1                           2333415 64 -   7040546 ATT------AACAA---------------TACAT-G-AAA-A-A--GA--T----AG------a-tattaattaaatgtataatatcctgaaaata---t--c--------aaaaac
i Camelus_dromedarius.KN272107.1                         C 0 I 28
s Camelus_ferus.KB017975.1                                  401697 64 -   1652518 ATT------AACAA---------------TACAT-G-AAA-A-A--GA--T----AG------a-tattaattaaatgtataatatcctgaaaata---t--c--------aaaaac
i Camelus_ferus.KB017975.1                               C 0 I 28
s CanFam4.chr16                                           17797860 67 -  60362399 ATT------CACAA---------------TATCT-G-AAA-A-A--GT--T--ATAAA-----A-CATTAATTACACTTATAATATGGtgaaaata---c--t--------aaatgc
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    183917 67 -    185531 ATT------CACAA---------------TATCT-G-AAA-A-A--GT--T--ATAAA-----A-CATTAATTACACTTATAATATGGtgaaaata---c--t--------aaatgc
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9033303 67 -   9314153 ATT------CACAA---------------TATCT-G-AAA-A-A--GT--T--ATAAA-----A-CATTAATTACACTTATAATATGGtgaaaata---c--t--------aaatgc
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17957568 67 -  59632846 att------cacaA---------------TATCT-G-AAA-A-A--GT--T--ATAAA-----A-CATTAATTACACTTATAATATGGtgaaaata---c--t--------aaatgc
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18498906 67 +  63665305 ATT------CACAA---------------TATCT-G-AAA-A-A--GT--T--ATAAA-----A-CATTAATTACACTTATAATATGGtgaaaata---c--t--------aaatgc
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           154121 64 -    496798 ACT------TAC-------------------TGGgg-aaa-a-a--ag--cat--caa-----a-taatgattaaattttaaatatgctgAAAATA---C--C--------AAATTC
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    136215 28 +    179628 ATT------T------A-T-----A-A-T-ATTA-T-CTA-A-A--GGCATAG--ag------------------------------------------------------------
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     91558 66 +    217609 ATT------AATAG---------------TATAT-G-GAA-AAA--GT--A----TGG-----A-CATTAATTaaatttacaacaacctgaaaatg---c--c--------aaatgt
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 28
s Cebuella_niveiventris.k141_1251222                          7482 68 -     11392 ATA------TATAA---------------TATTTGA-AAC-G-G--TG--TAT--AGA-----A-TATTGATTAAATTTACAATACGTggaaaata---c--g--------gaatga
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               3580 68 -      7577 ATA------TATAA---------------TATTTGA-AAC-G-G--TG--TAT--AGA-----A-TATTGATTAAATTTACAATACGTggaaaata---c--g--------gaatga
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_olivaceus.k141_1000828                                1518 68 -      2944 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--TAT--AGA-----A-TATTAATTAAATTTACAATATGTGGAAAATA---C--C--------GAATGA
i Cebus_olivaceus.k141_1000828                           C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         3632 64 +     31688 ACT------TAC-------------------TGGGG-AAA-A-A--AG--CAT--CAA-----A-Tagtgattaaatttcaaatatgctgaaaata---c--c--------aaattc
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12229981 67 +  27778364 ATT------TACGA---------------TATCT-G-AAA-A-A--GG--C--ATAGA-----A-TATCAATTAAATCTACAGTATGctgaaaatg---c--c--------aaatgc
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1008 67 -     25243 ATT------TATGA---------------TATCT-G-AAA-A-A--GG--C--ATAGA-----A-TATCAATTAAATCTACAGTATGctgaaaatg---c--c--------aaatgc
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4473100 68 +   4669795 ata------tataa---------------tatttga-aac-a-a--tg--cat--ata-----a-tattaattaaatttataatatggggaaaata---c--c--------aaatgc
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        11647 68 -     19203 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAATATGGGgaaaata---c--c--------aaatgc
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           6069 68 +      8260 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAATATGGGgaaaata---c--c--------aaatgc
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           6296 68 +     27781 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAATATGGGgaaaata---c--c--------aaatgc
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         6452 68 -     20310 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAATATGGGgaaaata---c--c--------aaatgc
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           9431 68 +     29689 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAATATGGGgaaaata---c--c--------aaatgc
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            3861 68 +      9989 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAGTATGGGgaaaata---c--c--------aaatgc
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          12110 67 -     27936 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAATATGGGGAaa-ta---c--g--------aaatgc
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                             985 68 -     17152 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAATATGGGgaaaata---c--c--------aaatgc
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38814513 68 +  39242232 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAATATGGGgaaaata---c--c--------aaatgc
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21220214 68 -  21565898 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAATATGGGgaaaata---c--c--------aaatgc
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       37333 68 -     53127 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----T-TATTAATTAAATTTATAATATGGGgaaaata---c--c--------aaatgc
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        4621 40 +      7159 ---------------------------------------------------------------A-TATTAATTAAATTTATAATATGGGgaaaata---c--c--------aaatgc
i Cercopithecus_nictitans.k141_3278028                   I 7 C 0
s Cercopithecus_petaurista.k141_807961                       12136 68 -     27947 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAATATGGGgaaaata---c--c--------aaatgc
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         12109 68 +     17596 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAATATGGGgaaaata---c--c--------aaatgc
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          1332 68 +     26000 ATA------CATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAATATGGGgaaaata---c--c--------aaatgc
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            6037 66 -      6351 ATC------CACCG--A-TG-AGT--GCCTAGCT-G-AAA-A-A--GA--CAC--AGG-----C--TCCAACTCAGCT--CAGTGTGCGGACAGTG---C-----------------
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       I 17 I 6
s Cheirogaleus_major.k141_333249                             19229 67 -     52598 ATT------TATAG---------------TATTT-G-AAA-A-A--GG--CAT--AGA-----A-TAGTAATTAAATTTACCGTATGctgaaaatt---c--c--------aaatgc
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           14574 67 +     57038 ATT------TATAA---------------TATTT-G-AAA-A-A--GG--CAT--AGA-----A-TAGTAATTAAATTTACCGTATGctgaaaatt---c--c--------aaatgc
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chlorocebus_aethiops.ctg25                              18426072 76 -  18827391 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAGTTAAATTTATAATATGGGGAAAATA---C--CCATATTATaaatgc
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       12510 76 -     50209 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAGTTAAATTTATAATATGGGGAAAATA---C--CCATATTATaaatgc
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135419518 68 + 135778131 ata------tataa---------------tatttga-aac-a-a--tG--CAT--ATA-----A-TATTAGTTAAATTTATAATATGGGGAAaata---c--c--------aaatgc
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 16407 69 +     19366 ATT------CACCAATA-AG-TGT----CTCTCT-G-AAA-A-A--Ga--cac--att-----a-tattaactaaattcacaatatgctgacagta---t-----------------
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 I 6
s Choloepus_hoffmanni.KN194906.1                            171506 69 +    839153 ATT------CACCAATA-AG-TGT----CTCTCT-G-AAA-A-A--Ga--cac--att-----a-tattaactaaattcacaatatgctgacagta---t-----------------
i Choloepus_hoffmanni.KN194906.1                         C 0 I 6
s Chrysochloris_asiatica.ChrAsi_scaffold_1271534                50 72 -      1204 ATT------CACCAG---TG---AAT-GCCATCT-G-AAA-A-A--G-----T--cta-----t-tatgaattaaatttacaatatgctggtgata---c--c--------aaattc
i Chrysochloris_asiatica.ChrAsi_scaffold_1271534         N 0 I 94
s Colobus_angolensis.KN981557.1                            1908034 68 +   2368649 ata------tataa---------------tatttga-aac-a-a--tg--cat--ata-----a-tattaattaaatttataatatgaGGAAAATa---t--c--------aaatgc
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199947710 68 + 200372422 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAATATGAGgaaaata---c--c--------aaatgc
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              34572 68 +     84244 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAATATGAGgaaaata---c--c--------aaatgc
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17547185 37 -  53390261 ---------------------------------------------------------a-----a-tat----tcaatttaCAATATGACgataata---c--c--------aactat
i Condylura_cristata.JH655891.1                          I 21 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          12541 58 -     20389 ATT------TACAA---------------TATCT-G-AAA-A-A--GG--CAT--AGT-----A-TATTAATtaaatttataatatgctgaaaat----------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 27 I 9
s Cricetomys_gambianus.CriGam_scaffold_18520                 48107 34 +     63868 ---------T----AGATTG-TTTATAAA-ATTT-A-AGG-A-A--GTCATGT--AA------------------------------------------------------------
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11665445 23 + 224834208 ---------T----AGACT--TT-ATAA--AGTT-A-AGA-a-a--g----------------------------------------------------------------------
i Cricetulus_griseus.LT883664.1                          C 0 I 2
s Crocidura_indochinensis.CroInd_scaffold_37019               1480 63 -     19598 GTT------TACAG---------------AAACT-T-GAA-A-A--AT---CC--TTA-----ACTCT----TGAACTTGCACTATTCAGAAAATA---T--C--------AAATAC
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27031 64 -     87169 ATT------TACAG---------------TATCT-G-AAA-A-C--AT--T--ATAAA-----A-TAT---TTACATTTATAATACGctgaaaata---c--t--------aaatgc
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    835294 21 +   1526836 ATT------T--------------------ATTT-G-GAA-A-A--AG--TAT--AA------------------------------------------------------------
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12535436 67 -  12879189 ATT------TATAA---------------TATTT-G-AAA-A-A--GG--CAt--aga-----a-tattaattaaatttacaatatgctgaaaatt---c--c--------aaatgc
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  671833 66 +   1390856 ATT------TACAA---------------TATCT-G-AAA-A-A--GG--C--ATAGA-----A-TATCAATTAAATCTACAGTATGctgaaaatg---c--c--------a-atgc
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    4589 67 +    198055 ATT------TACAA---------------TATCT-G-AAA-A-A--GG--C--ATAGA-----A-TATCAATTAAATCTACAGTATGctgaaaata---c--c--------aaatgc
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Echinops_telfairi.JH980293.1                            48778026 76 + 111700974 ATT------TACCA--A-T---AAATGTCCATCT-G-AGA-G-A--GC--TAT--Aca-----t-taggagtaaaatttataatatgctgataata---t--a--------aaatgc
i Echinops_telfairi.JH980293.1                           C 0 I 16
s Eidolon_helvum.KE759718.1                                   9065 68 +     11740 ATT------TAcaa---------------tatgt-g-aaa-a-a-aag--cat--aga-----a-tattaattaaattgaCAATATGctgaaaata---c--t--------gaatgc
i Eidolon_helvum.KE759718.1                              I 14 C 0
s Ellobius_lutescens.LOEQ01008920.1                          17649  1 -    110024 ---------T-----------------------------------------------------------------------------------------------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 7
s Ellobius_talpinus.LOJH01109367.1                            3703  1 -      6299 ---------C-----------------------------------------------------------------------------------------------------------
i Ellobius_talpinus.LOJH01109367.1                       C 0 I 7
s Enhydra_lutris.KZ291758.1                               16327870 67 -  41312741 ATT------TACAA---------------TATCT-G-AAA-A-A--GT--T--ATAAA-----A-CATTAATTACGTTTATAATACGctgaaaata---c--t--------aaatgc
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1281893 67 +   4378816 ATT------TACAA---------------TATCT-G-AAA-A-G--GG--C--ATAGA-----A-TATCAATTaaatttacaatacgttgaaaaca---c--c--------aaatgc
i Equus_asinus.JREZ01000139.1                            I 2 C 0
s Equus_caballus.CM000403.2                               18529714 67 -  39960074 ATT------TACAA---------------TATCT-G-AAA-A-G--GG--C--ATAGA-----A-TATCAATTAAATTTACAATATGctgaaaaca---c--c--------aaatgc
i Equus_caballus.CM000403.2                              I 2 C 0
s Equus_przewalskii.KK951119.1                               31729 67 +    498745 ATT------TACAA---------------TATCT-G-AAA-A-G--GG--C--ATAGA-----A-TATCAATTAAATTTACAATATGctgaaaaca---c--c--------aaatgc
i Equus_przewalskii.KK951119.1                           I 2 C 0
s Erythrocebus_patas.Contig38                             21202708 68 -  21539334 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAGTTAAATTTATAATATGGGgaaaata---c--c--------aaatgc
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              11921 67 -     14127 ATT------TATAA---------------TATTT-G-AAA-A-A--GC--CAT--AGC-----A-TAGTAATTAAATTTATCGTATGctgaaaatt---c--c--------aaatgc
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                4619 67 -     16928 ATT------TATAA---------------TATTT-G-AAA-A-A--GC--CAT--AGC-----A-TAGTAATTAAATTTATCGTATGctgaaaatt---c--c--------aaatgc
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              13656 67 -     25546 ATT------TATAA---------------TATTT-G-AAA-A-A--GG--CAT--AGC-----A-TAGTAATTAAATTTATCGTATGctgaaaatt---c--c--------aaatgc
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            10846 67 +     26330 ATT------TATAA---------------TATTT-G-AAA-A-A--GG--CAT--AGC-----A-TAGTAATTAAATTTATTGTATGctgaaaatt---c--c--------aaatgc
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 12085 67 +     23973 ATT------TATAA---------------TATTT-G-AAA-A-A--GC--CAT--AGC-----A-TAGTAATTAAATTTATCGTATGctgaaaatt---c--c--------aaatgc
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                10846 67 +     75513 ATT------TATAA---------------TATTT-G-AAA-A-A--GG--CAT--AGC-----A-TAGTAATTAAATTTATTGTATGctgaaaatt---c--c--------aaatgc
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  8788 67 +     97555 ATT------TATAA---------------TATTT-G-AAA-A-A--GC--CAT--AGC-----A-TAGTAATTAAATTTATCGTATGctgaaaatt---c--c--------aaatgc
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            11724 67 +     26496 ATT------TATAA---------------TATTT-G-AAA-A-A--GG--CAT--AGC-----A-TAGTAATTAAATTTATCATATGctgaaaatt---c--c--------aaatgc
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  2321 67 -     17153 ATT------TATAA---------------TATTT-G-AAA-A-A--GC--CAT--AGC-----A-TAGTAATTAAATTTATCGTATGctgaaaatt---c--c--------aaatgc
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              11897 67 +    111500 ATT------TATAA---------------TATTT-G-AAA-A-A--GC--CAT--AGC-----A-TAGTAATTAAATTTATCGTATGctgaaaatt---c--c--------aaatgc
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20235727 64 + 206538554 ATT------TACAA---------------TATCT-G-AAA-A-A--GT--T--ATAGA-----A-TAT---TTACGTCTATAATGCactgaaaata---c--t--------aaatgc
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20194570 64 + 205367284 ATT------TACAA---------------TATCT-G-AAA-A-A--GT--T--ACAGA-----A-TAT---TTACGTCTATAAGGCactgaaaata---c--t--------aaatgc
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  8084 64 -     36744 ATT------TACAA---------------TATCT-G-AAA-A-A--GT--T--ATAGA-----A-TAT---TTACGTCTATAATGCactgaaaata---c--t--------aaatgc
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     424456 63 -    453645 ATT------TCGAA---------------TATTT-T-AAA-A-A--GG--TAT--AGA-----A-----AATGAAATTTAGAATATGCTATAGAGT---C--C--------AGGTTC
i Galago_moholi.ctg2040                                  C 0 I 30
s Galago_senegalensis.k141_631886                             2163 63 +     11339 ATT------TCGAA---------------TATTT-T-TAA-A-A--GG--TAT--AGA-----A-----AATGAAATTTAGAATATGCTATAGAGT---C--C--------AGGTTC
i Galago_senegalensis.k141_631886                        C 0 I 30
s Galagoides_demidoff.k141_1959596                            5971 63 +      6795 ATT------TAGAA---------------TATTT-T-AAA-A-A--GG--TAT--ATA-----A-----AATGAAATTTAGAATATGCTAAAGAGT---C--C--------AAGTTC
i Galagoides_demidoff.k141_1959596                       C 0 I 30
s Galeopterus_variegatus.GalVar_scaffold_197845               2189 68 -      3123 ATT------TGTAA---------------TATTT-G-AAA-A-A--GG--CAA--AGA-----A-TATTAATtaaatttacaacatgctgaaaata---c--c-------aaaatgc
i Galeopterus_variegatus.GalVar_scaffold_197845          C 0 C 0
s Gorilla_beringei.k141_3596273                              13476 68 -     32273 ATA------TATAA---------------TATTTGA-AAC-A-G--TG--CAT--AGA-----A-TACTAATTAAATTTATAATACGTGgaaaata---c--c--------aaatgc
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186335624 68 + 186649187 ata------tataa---------------tatttga-aac-A-A--TG--CAT--AGA-----A-Tactaattaaatttataatacgtggaaaata---c--c--------aaatgc
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           4975 67 -     19426 ATT------TATAA---------------TATTT-G-AAA-A-A--GG--CAT--AGC-----A-TAGTAATTAAATTTACTGTATGctgaaaatt---c--c--------aaatgc
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             10124 67 -     15286 ATT------TATAA---------------TATTT-G-AAA-A-A--GG--CAT--AGC-----A-TAGTAATTAAATTTACTGTATGctgaaaatt---c--c--------aaatgc
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             11763 67 +     18253 ATT------TATAA---------------TATTT-G-AAA-A-A--GG--CAT--AGC-----A-TAGTAATTAAATTTACTGTATGctgaaaatt---c--c--------aaatgc
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         11864 67 -     41752 ATT------TATAA---------------TATTT-G-AAA-A-A--GG--CAT--AGC-----A-TAGTAATTAAATTTACTGTATGctgaaaatt---c--c--------aaatgc
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         11702 67 -     16460 ATT------TATAA---------------TATTT-T-AAA-A-A--GG--CAT--AGC-----A-TAGTAATTAAATTTACTGTATGctgaaaatt---c--c--------aaatgc
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               240876 64 +    327341 ATT------TACAA---------------TATCT-G-AAA-A-C--AT--T--ATAAA-----A-TAT---TTACATTTATAATACGctgaaaata---c--t--------aaatgc
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_403422                 210 72 -       893 GTT------TACCAG---T-----AT--CCATCT-G-AAA-A-A--GA--CAT--ATA-----C-CATGAATTCAGtttacaatatgctgacaata---c--c--------aaatgc
i Heterohyrax_brucei.HetBruBak_scaffold_403422           C 0 I 17
s Hipposideros_armiger.JXIK01000431.1                       110336 67 +   1711038 ATT------TACAA---------------TTTCT-G-AAA-A-A--GG--CAT--AGA-----A-TATTAATTCAACTTACAATATGctaaaaata---c--c--------aaatgc
i Hipposideros_armiger.JXIK01000431.1                    I 18 C 0
s Hipposideros_galeritus.HipGal_scaffold_216130                405 67 -      1713 ATT------TACAA---------------TTTCT-G-AAA-A-A--GG--CAT--AGA-----A-TATTAATTCAACTTACAATATGctgaaacta---c--c--------aaatgc
i Hipposideros_galeritus.HipGal_scaffold_216130          I 137 I 117
s Hoolock_leuconedys.ctg274                                    432287 68 +    630532 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--AGA-----A-TATTAATGAAATTTATAATATGTGgaaaata---c--c--------aaatgc
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  43008 64 +     55795 ACT------TACAA---------------TATCT-G-AAG-A-C--AT--T--ATAAA-----A-TAT---TTACATTTATAATACactgaaaata---c--t--------aaatgt
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_307679                               15224 68 -     15490 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--AGA-----A-TATTAATGAAATTTATAATATGTGgaaaata---c--c--------aaatgc
i Hylobates_agilis.k141_307679                           C 0 C 0
s Hylobates_klossii.k141_282416                              57230 68 +     67168 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--AGA-----A-TATTAATGAAATTTATAATATGTGgaaaata---c--c--------aaatgc
i Hylobates_klossii.k141_282416                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189540880 68 - 191637585 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--AGA-----A-TATTAATGAAATTTATAATATGTGgaaaata---c--c--------aaatgc
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3333774 68 -  11177569 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--AGA-----A-TATTAATGAAATTTATAATATGTGgaaaata---c--c--------aaatgc
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7518246 26 -   7955117 ATT-CCTTAT--------------------ATTT-G-AAA-A-A--GG--CTT--AG------------------------------------------------------------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 302
s Indri_indri.k141_3655594                                   20669 67 +     31101 ATT------TATAA---------------TATTT-G-AAA-A-A--GG--CAT--AGA-----A-TAGTAATTAAATTTACCGCATGctgaaaatt---c--c--------aaatgc
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15522226 67 -  30322482 ATT------TATAA---------------TATTT-G-AAA-A-A--GG--CAT--AGC-----A-TAGTAATTAAATTTACTGTATGctgaaaatt---c--c--------aaatgc
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        5222 68 +     64341 ATA------TATAA---------------TATTTGA-AAC-A-G--TG--TAT--AGA-----A-TATTAATTAAATTTATAATACGTGGAGAATA---C--G--------GAATGA
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           2283 68 +      4941 ATA------TATAA---------------TATTTGA-AAC-A-G--TG--TAT--AGA-----A-TATTAATTAAATTTATAATACGTGGAGAATA---C--G--------GAATGA
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        5149 68 +     35603 ATA------TATAA---------------TATTTGA-AAC-A-G--TG--TAT--AGA-----A-TATtaattaaatttacaatacgtggagaata---c--g--------gaatga
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    26622 68 +     38576 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--TAT--AGA-----A-TATTAATTAAATTTACAATACGTGGAAAATA---T--G--------GAATGA
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         23319 68 +     66356 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--TAT--AGA-----A-TATTAATTAAATTTATAATACGTGGAAAATA---C--G--------GAATGA
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          9107 67 -     23766 GTT------TATAA---------------TATTT-G-AAA-A-A--GG--CAT--AGA-----A-TAGTAATTAAATTTACTATATGctaaaaatt---c--c--------acatgc
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             27054 67 +     45836 GTT------TATAA---------------TATTT-G-AAA-A-A--GG--CAT--AGA-----A-TAGTAATTAAATTTACTATATGCTAAAAATT---C--C--------ACATGC
i Lepilemur_dorsalis.k141_577674                         C 0 I 118
s Lepilemur_ruficaudatus.k141_320948                          1278 67 -      1719 ATT------TATAA---------------TATTT-G-AAA-A-A--GG--AAT--AGA-----A-TAGTAATTAAATTTACTGTATGctgaaaatt---c--c--------acattc
i Lepilemur_ruficaudatus.k141_320948                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      25109 67 +     54090 GTT------TATAA---------------TATTT-G-AAA-A-A--GG--CAT--AGA-----A-TAGTAATTAAATTTACTGTATGctaaaaatt---c--c--------acatgc
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.APMU01168965.1                       650 67 -      1094 ATT------TACTA---------------TATTT-G-AAA-A-A--GT--T--CTAAA-----a-cattaattacatttataatatgCTTAAaata---c--t--------aaatgc
i Leptonychotes_weddellii.APMU01168965.1                 C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     4087 57 -     14121 ATT------TATAA---------------TATTT-G-AAA-A-A--GG--CAC--AGA-----A-AATTAATTacattttcaacatgccaaaaa-----------------------
i Lepus_americanus.LepAme_scaffold_107385                I 22 C 0
s Lophocebus_aterrimus.ctg367                              1434645 68 +   1826925 ACA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAATATGGGgaaaata---c--c--------aaatgc
i Lophocebus_aterrimus.ctg367                            C 0 I 7
s Loris_lydekkerianus.k141_2539221                            3912 63 +     11245 ACT------TAGAA---------------TATTT-G-AAA-A-A--AT--TAT--AGA-----A-----AATGAAATTTACAATATGCTAAAGAGT---C--C--------AAGTTC
i Loris_lydekkerianus.k141_2539221                       C 0 I 7
s Loris_tardigradus.ctg83                                  1002750 63 +   6120653 ACT------TAGAA---------------TATTT-G-AAA-A-A--AT--TAT--AGA-----A-----AATGAAATTTACAATATGCTAAAGAGT---C--C--------AAGTTC
i Loris_tardigradus.ctg83                                C 0 I 7
s Loxodonta_africana.GL010049.1                            4215527 78 -  43346337 ATT------TACTG--A-T---AAATGCCTATCT-G-Aaa-a-ttggt--ttt--ttt-----t-aatgaattaaactTATAATGtgctgacaaca---c--c--------aaatgt
i Loxodonta_africana.GL010049.1                          C 0 I 17
s Lycaon_pictus.CM007581.1                                17953808 67 -  59628241 att------cacaA---------------CATCt-g-aaa-a-a--gt--t--ataaa-----a-cattAATTACACTTATAATATGGCgaaaata---c--t--------aaatgc
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               4458 68 +     40492 GTA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAATATGGGgaaaata---c--c--------aaatgc
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59673720 68 +  60120075 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAATATGGGgaaaata---c--c--------aaatgc
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 10214 68 -     26193 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAATATGGGgaaaata---c--c--------aaatgc
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            78018 68 -    114318 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAATATGGGgaaaata---c--c--------aaatgc
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  3717 68 -     23192 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAATATGGGgaaaata---c--c--------aaatgc
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                13177 68 -     29190 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAATATGGGgaaaata---c--c--------aaatgc
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  21745 68 +     37952 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAC--ATA-----A-TATTAATTAAATTTATAATATGGGgaaaata---c--c--------aaatgc
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186836833 68 + 187317192 ata------tataa---------------tatttga-aac-a-a--tg--cat--ata-----a-tattaattaaatttataatatggggaaaata---c--c--------aaatgc
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25455396 68 -  25927173 ata------tataa---------------tatttga-aac-a-a--tg--cac--ata-----a-tattaattaaatttataatatggggaaaata---c--c--------aaatgc
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  77594 68 +     89720 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAC--ATA-----A-TATTAATTAAATTTATAATATGGGgaaaata---c--c--------aaatgc
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 4591 68 +     20474 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAATATGGGgaaaata---c--c--------aaatgc
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   4393 68 -     14993 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAATATGGGgaaaata---c--c--------aaatgc
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  327263 68 -    668171 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAC--ATA-----A-TATTAATTAAATTTATAATATGGGgaaaata---c--c--------aaatgc
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 2703 68 -     24072 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAATATGGGgaaaata---c--c--------aaatgc
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               23332 68 -     45290 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAC--ATA-----A-TATTAATTAAATTTATAATATGGGgaaaata---c--c--------aaatgc
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 89138 69 +     94391 ATT------TACAA---------------TATAT-TTTTA-A-A-AAG--CAT--AGA-----A-TATTAATTAAATTGACATTATGctgaaaata---t--t--------gaatgc
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 14 C 0
s Mandrillus_leucophaeus.scaffold280                      23934919 68 -  24302211 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAATATGGGgaaaata---c--c--------aaatgc
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               349052 68 +    752769 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAATATGGGgaaaata---c--c--------aaatgc
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              17998 67 +    737560 ATT------TACAA---------------TATCA-G-AAA-A-A--GG--C--ATCGA-----A-TATtgattaaatttacaatatgctgaaaata---c--c--------aaatgc
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              49382 67 -    317179 ATT------TATAA---------------TATCA-G-AAA-A-A--GG--C--Ataga-----a-tattgattaaatttacaatatgctgaaaata---c--c--------aaatgc
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33100554 26 -  40650429 ATT-CCTTAT--------------------ATTT-G-AAA-A-A--GG--CTT--AG------------------------------------------------------------
i Marmota_marmota.CZRN01000018.1                         C 0 I 298
s Megaderma_lyra.MegLyr_scaffold_4542                         8877 58 -    207569 ATT------TATAA---------------TACCT-A-AAA-T-A--GG--CAT--AGA-----A-TATTAATTAAATTTATAATATGctgaaaat----------------------
i Megaderma_lyra.MegLyr_scaffold_4542                    I 27 I 9
s Mellivora_capensis.MelCap_flattened_line_69365              8588 67 +     13704 ATT------TACAA---------------TATCT-G-AAA-A-A--GT--T--ATAAA-----A-CATTAATTACATTTAGAATACGctgaaaata---c--t--------aaatgc
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 30725 34 +    140813 ---------T----AGTGTG-TGTATAAA-ATTT-A-AGA-A-A--GTCATAT--AA------------------------------------------------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12180520 12 -  29670104 ------------------------------ATTC-ATATA-a-t--g----------------------------------------------------------------------
i Mesocricetus_auratus.KB708134.1                        I 9 I 2
s Mico_argentatus.k141_1239457                                3404 68 -      7380 ATA------TATAA---------------TATTTGA-AAC-G-G--TG--TAT--AGA-----A-TATTGATTAAATTTACAATACGTggaagata---c--c--------aaataa
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               2470 68 +     18990 ATA------TATAA---------------TATTTGA-AAC-G-G--TG--TAt--aga-----a-tattgattaaatttacaatacgtggaaaata---c--c--------aaataa
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      3409 68 -      7356 ATA------TATAA---------------TATTTGA-AAC-G-G--TG--TAT--AGA-----A-TATTGATTAAATTTACAATACGTggaagata---c--c--------aaataa
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18289613 67 -  93316391 att------tataa---------------tattt-g-aaa-a-a--gg--cAT--AGA-----A-TAGTAATTAAATTTACTGTACGCTGAAAATT---c--c--------aaatgc
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    17866 76 -    145209 ATT------TACCA--A-T---AAATGTCTATCT-G-AGG-G-A--GC--TAT--ATA-----T-TATGAGTAAAATTTATATTATGCTGATAACA---T--A--------AAATGC
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 16
s Microtus_ochrogaster.CM001695.1                         11258700  1 -  27267610 ---------T-----------------------------------------------------------------------------------------------------------
i Microtus_ochrogaster.CM001695.1                        C 0 I 7
s Miopithecus_ogouensis.k141_534055                           6639 68 -     28506 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAATATGGGgaaaata---c--t--------aaatgc
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         4064 67 -      8324 ATT------TACTA---------------TATTT-G-AAA-A-A--GT--T--CTAAA-----A-CATTAATTACATTTATAATATGCTTAAaata---c--t--------aaatgc
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      7186 67 -     37649 ATT------TATAA---------------TATTT-G-AAA-A-A--GG--CAt--aga-----a-tagtaactaaatttaccatatgctgaaaatt---c--c--------aaatgc
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 139844 67 -    366855 ATT------CATAG---------------TATCT-G-AAA-A-A--Gc----aataga-----a-tgttaattaaatttacaatatgctgaaaata---c--c--------aaatgc
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   33983 64 +     37127 ATT------TACAA---------------TATCT-A-AAA-A-C--AT--T--ATAAA-----A-TAT---TTACATTTATAATACGctgaaaata---c--t--------aaatgc
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Mus_caroli.LT608237.1                                   84359138 34 - 120012414 ---------T----AGACTG-gttataaa-attt-a-aga-a-a--gtcatat--aa------------------------------------------------------------
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87648122 34 - 129401213 ---------T----AGACTg-tttataaa-aatt-a-aga-a-a--gtcatat--aa------------------------------------------------------------
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31352784 34 -  89631738 ---------T----AGACtg-tttataaa-attt-a-aga-a-a--gtcaaat--aa------------------------------------------------------------
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90750200 34 - 130317789 ---------T----AGACtg-tttataaa-aatt-a-aga-a-a--gtcatat--aa------------------------------------------------------------
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               299763 67 -  14710649 ATT------TACAA---------------AATCT-G-AAA-A-A--GT--T--Ataca-----a-tatttattatgtttataataCAGtgaaaata---c--t--------aaatgt
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187330 69 +    196477 ATT------CACCAATA-AG-TGT----CTATCT-G-AAA-A-A--AG--CAA--ATT-----A-TATTAATTAAATTCACACTATGctaacagca---c-----------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 I 6
s Nasalis_larvatus.k141_413338                               12635 68 +     21681 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TGTTAATTAAATTTATAACACGGGgaaaata---c--c--------aaatgc
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9148066 67 -   9404916 ATT------CACAA---------------TATCT-G-AAA-A-A--GT--T--ATAAA-----A-CATTAATTACACTTATAATATGGtgaaaata---c--t--------aaatgc
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102577675 63 - 196305487 ATT------TAGAA---------------TATCT-G-AAA-A-A--AA--TAC--AGA-----A-----AATGAAATTTACAATATGCTAAAGAGT---C--C--------AAGTTC
i Nycticebus_bengalensis.LG01                            C 0 I 7
s Nycticebus_coucang.k141_5327727                             5361 63 +      8486 ATT------TAGAA---------------TATCT-G-AAA-A-A--AA--TAC--AGA-----A-----AATGAAATTTACAATATGCTAAAGAGT---C--C--------AAGTTC
i Nycticebus_coucang.k141_5327727                        C 0 I 7
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105748102 63 + 199412804 ATT------TAGAA---------------TATCT-G-AAA-A-A--AT--TAT--AGA-----A-----AATGAAATTTACAATATGCTAAAGAGT---C--C--------AAGTTC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 7
s Ochotona_princeps.JH802162.1                             1361171 56 +   3988456 GAT------TTTAA---------------TATTC-C-AAA-A-A---A--CAT--Ata-----c-aattaattaaaattttaatatgctGAAAA-----------------------
i Ochotona_princeps.JH802162.1                           I 21 C 0
s Odobenus_rosmarus.KB229312.1                              505212 67 -   2017862 ATT------TACTA---------------TATTT-G-AAA-A-A--GT--T--CTAAA-----a-cattaattacatttataatatgCTTAAaata---c--t--------aaatgc
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   22266  1 +     28053 ---------T-----------------------------------------------------------------------------------------------------------
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 24
s Onychomys_torridus.OnyTor_scaffold_2986                    77348 34 +    102263 ---------T----AGA-TGGTTTATAAC-ATTT-A-AGA-A-A--GTCATAT--AA------------------------------------------------------------
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67144932 57 + 174332312 att------tataa---------------tattt-g-aaa-a-a--gg--cac--aga-----a-aattaattacattttcaaCATGCCAAAAA-----------------------
i Oryctolagus_cuniculus.CM000791.1                       I 22 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       461030 67 -    559221 ATT------CACAA---------------TATct-g-aaa-a-a--gt--t--ataaa-----a-tattaatcacaCTTATAATATGGCgaaaata---c--t--------aaatgc
i Otocyon_megalotis.JAEUCK010005147.1                    I 212 I 10
s Otolemur_crassicaudatus.k141_222918                         1998 63 +      8798 ATT------TCGAA---------------TATTT-T-AAA-A-A--GG--TAT--AGA-----A-----AATGAAATTTAGAATATTCTATAGAGT---C--C--------AGGTTC
i Otolemur_crassicaudatus.k141_222918                    C 0 I 30
s Otolemur_garnettii.GL873799.1                             694162 63 -   1103335 ATT------tcgaa---------------taatt-t-taa-a-a--gg--tat--aga-----a-----aatgaaatttagaatatTCTATAGAGT---C--C--------AGGTTC
i Otolemur_garnettii.GL873799.1                          C 0 I 30
s Pan_paniscus.KQ411613.1                                    41573 68 +     80009 ata------tataa---------------tatttga-aac-a-a--tG--CAT--AGA-----A-Tactaattaaatttataatacgtggaaaata---c--c--------aaatgc
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189140485 68 + 189151597 ata------tataa---------------tatttga-aac-A-A--TG--CAT--AGA-----A-Tactaattaaatttataatatgtggaaaata---c--c--------aaatgc
i Pan_troglodytes.CM009242.2                             I 84 I 81
s Panthera_onca.PanOnc_flattened_line_3271                  149735 64 +    230217 ATT------TACAA---------------TATCT-G-AAA-A-A--GT--G--ATAGA-----A-TAT---TTACGTCTATAATGCactgaaaata---c--t--------aaatgc
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                262941 66 +  18783137 ATT------TACAA---------------TATCT-G-AAA-A-A--GT--T--ATAGA-----A-TAT---TTACGTCTATAATGCactgaaaata---catt--------aaatgc
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4719578 64 -   8748460 ATT------TACAA---------------TATCT-G-AAA-A-A--GT--T--ATAGA-----A-TAT---TTATGTCTATAATGCactgaaaata---c--t--------aaatgc
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183440673 68 + 183742232 ata------tataa---------------tatttga-aac-a-a--tg--tat--ata-----a-tattaattaaatttataatatggggaaaata---c--c--------aaatgc
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             4366 68 +     20448 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--TAT--ATA-----A-TATTAATTAAATTTATAATATGGGgaaaata---c--c--------aaatgc
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20561172 68 +  20919399 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAATATGGGgaaaata---c--c--------aaatgc
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   3110 68 +     41871 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--TAT--ATA-----A-TATTAATTAAATTTATAATATGGGgaaaata---c--c--------aaatgc
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     6396 68 +     27711 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--TAT--ATA-----A-TATTAATTAAATTTATAATATGGGgaaaata---c--c--------aaatgc
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  6475 68 +      9205 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAATATGGGgaaaata---c--c--------aaatgc
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11222 36 -     78924 -----------------------------------------------------------------TAT---TTACATTTATAATACattgaaaata---c--t--------aaattc
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 23 C 0
s Perodicticus_ibeanus.k141_855320                            8127 62 +     13100 ATT------TAGAA---------------TATTT---AAA-A-A--AT--AAT--AGA-----A-----AATGAAATTTACAATATGCTAAAGAGT---C--C--------AAGTTC
i Perodicticus_ibeanus.k141_855320                       C 0 I 7
s Perodicticus_potto.k141_1092580                             6505 62 +     25941 ATT------TAGAA---------------TATTT---AAA-A-A--AT--AAT--AGA-----A-----AATGAAATTTACAATATGCTAAAGAGT---C--C--------AAGTTC
i Perodicticus_potto.k141_1092580                        C 0 I 7
s Peromyscus_maniculatus.KI615324.1                       18191951 34 -  18517816 ---------T----AGACTg-tttataaa-attt-a-aga-a-a--gtcATAT--AA------------------------------------------------------------
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Piliocolobus_badius.k141_1234363                           41141 68 +     62158 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAATACGGGgaaagta---t--c--------aaatgc
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        35871 68 +     89929 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAATACGGGgaaagta---t--c--------aaatgc
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            37287 68 +     51399 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAATACGGGgaaagta---t--c--------aaatgc
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14293525 68 -  14605196 ata------tataa---------------tatttga-aac-a-a--tg--cat--ata-----a-tattaattaaatttataatacgGGGAAAGGa---t--c--------aaatgc
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189128604 68 + 189387572 ATA------TATAA---------------CATTTGA-AAC-A-A--TG--CAT--AGa-----a-tattaatgaaattaataatatgtggaaaata---c--c--------aaatgc
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9568212 68 +   9816681 ATA------TATAA---------------CATTTGA-AAC-A-A--TG--CAT--AGA-----A-TATTAAtgaaattaataatatgtggaaaata---c--c--------aaatgc
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               70798 68 -     81375 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATCAAATTTATAACACGGGgaaaata---c--c--------aaatgc
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              2618 68 +     19060 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATCAAATTTATAACACGGGgaaaata---c--c--------aaatgc
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 11203 72 -     22811 GTT------TACCAG---T-----AT--CCATCT-G-AAA-A-A--GA--CAT--ACA-----C-CATGAATTCAGtttacaatatgctgacaata---c--c--------aaatgc
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 I 17
s Prolemur_simus.MPIZ01000396.1                            2594876 67 -   4620579 att------tataa---------------tattt-g-aag-A-A--GG--CAT--AGC-----A-TAGTAATTAAATTTACTGTATGCTGAAAAtt---c--c--------aaatgc
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     988867 67 +   2598838 att------tataa---------------tattt-g-aaa-a-a--gg--cAT--AGA-----A-CAGTAATTAAATTTACCGTATGCTGAAAAtt---c--c--------aaatgc
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          27177 67 +     38485 ATT------TATAA---------------TATTT-G-AAA-A-A--GG--CAT--AGA-----A-CAGTAATTAAATTTACCGTATGctgaaaatt---c--c--------aaatgc
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             3337 67 +      4256 ATT------TATAA---------------TATTT-G-AAA-A-A--GG--CAT--AGA-----A-CAGTAATTAAATTTACCGTATGctgaaaatt---c--c--------aaatgc
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          24690 67 +     35766 ATT------TATAA---------------TATTT-G-AAA-A-A--GG--CAT--AGA-----A-CAGTAATTAAATTTACCGTATGctgaaaatt---c--c--------aaatgc
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           2873 67 -     24134 ATT------TATAA---------------TATTT-G-AAA-A-A--GG--CAT--AGA-----A-CAGTAATTAAATTTACCGTATGctgaaaatt---c--c--------aaatgc
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        26694 67 -     67325 ATT------TATAA---------------TATTT-G-AAA-A-A--GG--CAT--AGA-----A-CAGTAATTAAATTTACTGTATGctgaaaatt---c--c--------aaatgc
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           2930 67 -      6182 ATT------TATAA---------------TATTT-G-AAA-A-A--GG--CAT--AGA-----A-CAGTAATTAAATTTACCGTATGctgaaaatt---c--c--------aaatgc
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             8367 34 -     21651 ---------T----agtgtg-tgtataaa-attt-a-aGA-A-G--GTCATAT--Aa------------------------------------------------------------
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            13242 67 -     21811 ATT------TATAG---------------TATCT-G-AAA-A-G--GG----AATAGa-----a-tattaattacatttgcaatatgttgaaaata---a--c--------aaatgc
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         38780 67 +     42204 ATT------TACAA---------------TATCT-G-AAA-A-A--GT--T--ATAAA-----A-CATTAATTACGTTTATAATATGctgaaaata---c--t--------aaatgc
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22975327 68 +  28871421 ATt------tacaa---------------tatat-g-aaa-a-a-aag--cat--aga-----a-tattaattaaattgaCAATATGctgaaaata---c--t--------gaatgt
i Pteropus_alecto.KB030862.1                             I 14 C 0
s Pteropus_vampyrus.KN525825.1                             1358416 68 +   4952924 ATt------tacaa---------------tatat-g-aaa-a-a-aag--cat--aga-----a-tattaattaaattgaCAATATGctgaaaata---c--t--------caatgt
i Pteropus_vampyrus.KN525825.1                           I 14 C 0
s Puma_concolor.QAVW01001104.1                            20272855 63 -  38429054 GTT------TACAA---------------TATCT-G--AA-A-A--GT--T--ATAGA-----A-TAT---TTACGTCTATAATGCactgaaaata---c--t--------aaatgc
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             12633 68 -     91421 ATA------TATAA---------------TATTTGA-AAT-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAACACGGGgaaaata---c--c--------gaatgc
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7606759 68 +   7812017 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAACACGGGgaaaata---c--c--------aaatgc
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             12607 68 -     72585 ATA------TATAA---------------TATTTGA-AAT-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAACACGGGgaaaata---c--c--------gaatgc
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53568205 34 +  90668790 ---------C----GGACCA-TTTATGAA-ATTT-A-AGA-A-A--GTCACAC--AA------------------------------------------------------------
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             4314 68 -     11128 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAACGCGGGgaaaata---c--c--------aaatgc
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91233669 68 - 195417433 ata------tataa---------------tatttga-aac-a-a--tg--cat--ata-----a-tattaattaaatttataacATGGGGAAaata---c--c--------aaatgc
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7669318 68 +   7961872 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAACGCGGGgaaaata---c--c--------aaatgc
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                86337 68 -     96226 ATT------TACAA---------------TGTAT-G-AAA-A-A-AAG--CAT--AGA-----A-TATTAATTAAATTGACAATATGctgaaaata---c--c--------gaatgc
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 14 C 0
s Saguinus_bicolor.k141_2619299                               5531 68 -      8359 ACA------TATAA---------------TATTTGA-AAC-A-G--TG--TAT--AGA-----A-TATTAATTaaatttacaatacgtggagaata---c--g--------gaatga
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            11839 68 -     13588 ATA------TATAA---------------TATTTGA-AAC-A-G--TG--TAT--AGA-----A-TATTAATTAAATTTACAATACGTGGAGAATA---T--G--------GAATGA
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              5477 68 -      6207 GCA------TATAA---------------TATTTGA-AAC-A-G--TG--TAT--AGA-----A-TATTAATTAAATTTACAATATGTGgagaata---c--g--------gaatga
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               11204 68 +     13640 GCA------TATAA---------------TATTTGA-AAC-A-G--TG--TAT--AGA-----A-TATTAATTAAATTTACAATATGTGgagaata---c--g--------gaatga
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               6067 68 +      8564 GCA------TATAA---------------TATTTGA-AAC-A-G--TG--TAT--AGA-----A-TATTAATTAAATTTACAATATGTGgagaata---c--g--------gaatga
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209466345 68 + 209938924 ACA------TATAA---------------TATTTGA-AAC-A-G--TG--TAT--AGA-----A-TATTAATTaaatttacaatacgtggagaata---c--g--------gaatga
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 5555 68 -      9399 GCA------TATAA---------------TATTTGA-AAC-A-G--TG--TAT--AGA-----A-TATTAATTAAATTTACAATATGTGgagaata---c--g--------gaatga
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 2704 68 +      3421 ATA------TATAA---------------TATTTGA-AAC-A-G--TG--TAT--AGA-----A-TATTAATTAAATTTACAATACGTGGAGAATA---T--G--------GAATGA
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119948881 68 - 121099817 ata------tataa---------------tatttga-aac-a-a--tg--tat--aga-----a-tattaattaaatttacaatatttggaaaata---c--t--------gaaTGA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       21335 68 +     46362 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--TAT--AGA-----A-TATTAATTaaatttacaatatttggaaaata---c--c--------aaatga
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               21430 68 +     45824 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--TAT--AGA-----A-TATTAATTAAATTTACAATATTTGgaaaata---t--c--------gaatga
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             38058 68 -     64574 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--TAT--AGA-----A-TATTAATTAAATTTACAATATTTGgaaaata---c--c--------gaatga
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               1064 68 -     23631 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--TAT--AGA-----A-TATTAATTAAATTTACAATATTTGgaaaata---c--c--------gaatga
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 21323 68 -     61129 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--TAT--AGA-----A-TATTAATTaaatttacaatatttggaaaata---c--c--------aaatga
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    152242 45 -    313613 -----------------------------------------A-A--AA---AA--AAA-----A-AAA----TCAATTTACAATATattgagaata---c--c--------aactgc
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 17 C 0
s Semnopithecus_entellus.k141_11662                          17141 68 -     19888 ATA------CATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAACACGGGgaaaata---c--c--------aaatgc
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      24344 68 +     39453 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAACACGGGgaaaata---c--c--------aaatgc
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            4870 68 +     27826 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAACACAGGgaaaata---c--c--------aaatgc
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             4390 68 -     19483 ATA------CATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAACACGGGgaaaata---c--c--------aaatgc
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      4452 68 +      7198 ATA------CATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAACACGGGgaaaata---c--c--------aaatgc
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         12712 68 +     15514 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAACACGGGgaaaata---c--c--------aaatgc
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               2353 62 +   1910179 AAT------GACAA---------------TATCT-A-GAA-A-A--AT---AC--TGA-----A-TAT----TAAATTTGCACTATGctgaaaata---a--c--------aaatgc
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13649514 63 -  18376816 ATC------TACAG---------------TATCC-A-AAA-A-A--TA---CC--TTA-----ACTAT----TGCATTCACACTGTATAGAAAATA---C--C--------AAGTGC
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1951442 26 -   3870691 ATT-CCTTAT--------------------ATTT-G-AAA-A-A--GG--CTT--AG------------------------------------------------------------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 299
s Spilogale_gracilis.SpiGra_flattened_line_13525             29295 66 +     97271 ATT------TACAA---------------TATCT-G-AA--A-A--GT--T--ATAAA-----A-TATTAGCTACATTTATAATATGctgaaaata---c--t--------aaacgc
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              16877 64 -    196729 ATT------TACAA---------------TATCT-G-AAA-A-C--AT--T--ATAAA-----A-TAT---TTACATTTATAATACGctgaaaata---c--t--------aaatgc
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.JH118708.1                                      34077 65 -     47482 ATT------AAtgg---------------tatat-g--aa-aaa--ga--a----tgt-----a-tattaattaaatttacaacaacctgaaaata---c--c--------aaatgt
i Sus_scrofa.JH118708.1                                  C 0 I 28
s Symphalangus_syndactylus.tarseq_199                      1090922 68 -   1523678 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--AGA-----A-TATTAATGAAATTTATAATATGTGgaaaata---c--c--------aaatgc
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 9179 66 +     41958 ATT------TAT-A---------------TATCT-G-AAA-A-A--GG--CAG--AGA-----A-AATTCATtaaatttacaataggctgaaaata---c--c--------aaaagc
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 70684 69 +    116680 ATT------CACCACTA-TG-TGT----CTATCT-G-AAA-A-A--GA--CAA--ATT-----A-TATTAATTAAATTCACACTATGctaacagta---c-----------------
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 I 6
s Tapirus_indicus.TapInd_scaffold_9301                      117304 67 -    156842 ATT------TGCAA---------------TATCT-A-AAA-A-A--GA--C--ATAGA-----A-TATCAATTAAATTTACAATATGctgaaaatg---c--c--------aaatgt
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    385757 67 +    539355 ATT------TGCAA---------------TATCT-A-AAA-A-A--GG--C--ATAGA-----A-TATCAATTAAATTTACAATATGctgaaaatg---c--c--------aaatgt
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               24243 64 +     70052 ACT------TAC-------------------TGGGG-AAA-A-A--AG--CAT--CAA-----A-TTGtgattaaatttaaaatatgctgaaaata---c--c--------aaattc
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_2029956                               3583 64 +      4644 ACT------TAC-------------------TGGGG-AAA-A-A--AG--CAT--CAA-----A-TTGtgattaaatttaaaatatgctgaaaata---c--c--------aaattc
i Tarsius_wallacei.k141_2029956                          C 0 C 0
s Theropithecus_gelada.CM009954.1                        186426038 68 + 186847797 ata------tataa---------------tatttga-aac-a-a--tg--cat--ata-----a-tattaattaaatttataatatggGGAAAATA---C--C--------AAATGC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   3249 69 +      8208 ATT------CACCC--A-TG-AGTGT--GTAGCT-G-AAA-A-A--GA--CAC--AGG-----A-CATGAGTTCAGTTCCCaagatgctgacggtg---c-----------------
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 I 6
s Trachypithecus_auratus.k141_722599                          8443 68 -     20410 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAACACGGGgaaaata---c--c--------aaatgc
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    12637 68 +     15221 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAACACGGGgaaaata---c--c--------aaatgc
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        8544 68 +     19930 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAACACGGGgaaaata---c--c--------aaatgc
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       4973 68 -     19997 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAACACGGGgaaaata---c--c--------aaatgc
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            45093 68 -     60166 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAACACGGGgaaaata---c--c--------aaatgc
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        12565 69 -     27529 ATA------TATAA---------------TATTTGA-AACAA-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAACACGGGgaaaata---c--c--------aaatgc
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     12507 68 -     18194 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAACACGGGgaaaata---c--c--------aaatgc
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           6240 68 -     21137 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAACACGGGgaaaata---c--c--------aaatgc
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    4943 68 -     10723 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAACACGGGgaaaata---c--c--------aaatgc
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         4095 68 +      9834 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAACACGGGgaaaata---c--c--------aaatgc
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        22411 68 +     32220 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAACACGGGgaaaata---c--c--------aaatgc
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5936510 68 +   6242583 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAACACGGGgaaaata---c--c--------aaatgc
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        5758 68 +     20839 ATA------TATAA---------------TATTTGA-AAC-A-A--TG--CAT--ATA-----A-TATTAATTAAATTTATAACACGGGgaaaata---c--c--------aaatgc
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2153269 67 +   4065304 att------tgtaa---------------tattt-t-aaa-a-a--ga--cat--aga-----a-ttttaatttaatttataatatgtGgaaaata---c--c--------aaatgc
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     6887 67 -     10553 ATT------TGTAA---------------TATTT-T-AAA-A-A--GA--CAT--AGA-----A-TTTTAACTTAATTTATAATATGTGgaaaata---c--c--------aaatgc
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   52438 50 -     77625 -----------------------------------------A-A--AA---AA--AAAATTAAA-TAT----TAAGTGTACAATATGTtgagaata---t--c--------aacagc
i Uropsilus_gracilis.UroGra_scaffold_12083               I 17 C 0
s Ursus_maritimus.KK499267.1                               4848991 51 -   5085361 ATT------TATAG---------------TATCt-g-aaa-a-a--gt--t--ataaa-----a-cattaa---------taatatgctgaaaata---c-----------------
i Ursus_maritimus.KK499267.1                             C 0 I 6
s Varecia_rubra.k141_590885                                   9559 67 +     50397 ATT------AATAA---------------TATTT-G-AAA-A-A--GG--CAT--AGA-----A-CAGTAATTAAATTTACTGTATGctgaaaatt---c--c--------aaatgc
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              9613 67 +     24756 ATT------AATAA---------------TATTT-G-AAA-A-A--GG--CAT--AGA-----A-CAGTAATTAAATTTACTGTATGctgaaaatt---c--c--------aaatgc
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5370444 64 -   5488506 ATT------AACAG---------------TACAT-G-AAA-A-A--GA--T----AG------A-Tattaattaaatgtataatatcctgaaaata---t--c--------aaaaac
i Vicugna_pacos.KN270157.1                               C 0 I 28
s Vulpes_lagopus.VulLag_flattened_line_30954                  9476 67 -     43706 ATT------CACAA---------------TATCT-G-AAA-A-A--GT--T--ATAAA-----A-CATTAATTACACTTAtaatatggcgaaaata---c--t--------aaatgc
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        22689 26 -     24430 ATT-CATAAT--------------------ATTT-G-AAA-A-A--GG--CTT--AG------------------------------------------------------------
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          3706 67 +     86975 ATT------TACTA---------------TATTT-G-AAA-A-A--GT--T--CTAAA-----A-CATTAATTACATTTATAATATGCTTAAaata---c--t--------aaatgc
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Chiropotes_albinasus.k141_2813271                           8451 841 +     11226 I
e Cebus_unicolor.k141_219506                                 14903  0 -     16904 I
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79553  7 +    610378 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Sigmodon_hispidus.SigHis_scaffold_60841                    11304  0 -     12148 C
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7577 1418 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                14009  7 -     19307 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1089466 1162 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Desmodus_rotundus.KZ672289.1                             8628495  7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            62283 174 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                3465  7 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3102  7 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183691  7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       4291 81 +     62944 tgatgag---------gatgag-------------------gagt---a-act-ggaattct--cat--aaattgc-ttgtag-gaa-tgc---a---ag---atggtataacc--------a-ct-----ttgga-a-----acag------t--t-----t
s Acinonyx_jubatus.LLWD01001279.1                           825920 82 -   1699592 taatgag--c-ctaa-gg--ag-------------------t------g-agt-gcaagt----ctcataaactgc-tggaag-aag-tac---aaaatg---g---tgtaacc--------a-ct-----tttga-aaa--ca--g------t--t-----t
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 4
s Ailuropoda_melanoleuca.LNAT01000098.1                    9509179 81 -  29979442 tagtaagcatg-a---gg--ag-------------------t------g-acc--aaagt----ctcataaactgc-tggtgg-gag-tgc---aacatg---g---tgtggcc--------a-ct-----tttga-aaa--ca--g------t--t-----t
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 6 I 4
s Ailurus_fulgens.LNAC01001112.1                             77968 79 -    347723 taatgaacatg-a---gg--ag-------------------t------g-act--gaagt----ctc--aaactgc-tggtaa-gaa-tgc---aaaatg---g---tgtgacc--------a-ct-----tttga-aaa--ca--g------t--t-----t
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 4
s Allenopithecus_nigroviridis.k141_3361533                   12209 79 -     52922 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ctgtag-gaa-tgc---a---ac---atggtagaacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         12151 79 -     28001 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ctgtag-gaa-tgc---a---ag---atggtataacc--------a-ct-----ttgga-a-----a--g------t--t-----c
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          2597 79 -     18505 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ctgtag-gaa-tgc---a---ag---atggtatagcc--------a-ct-----ttgga-a-----a--g------t--t-----c
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           3446 79 -     12518 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ctgtag-gaa-tgc---a---ag---atggtatagcc--------a-ct-----ttgga-a-----a--g------t--t-----c
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                              1040 54 -     27731 tgctgag---------gatgag-------------------gagt---a-act-ggaattct--cat--aaattgc-ttgtag-gac-tgc---a---ag---------------------------------------------------------------
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                1165 54 +      3134 tgctgag---------gatgag-------------------gagt---a-act-ggaattct--cat--aaattgc-ttgtag-gac-tgc---a---ag---------------------------------------------------------------
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               1300 54 -     45847 tgctgag---------gatgag-------------------gagt---a-act-ggaattct--cat--aaattgc-ttgtag-gac-tgc---a---ag---------------------------------------------------------------
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                22506 54 +     25266 tgctgag---------gatgag-------------------gagt---a-act-ggaattct--cat--aaattgc-ttgtag-gac-tgc---a---ag---------------------------------------------------------------
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           1690 54 +      2906 tgctgag---------gatgag-------------------gagt---a-act-ggaattct--cac--aaattgc-ttgtag-gac-tgc---a---ag---------------------------------------------------------------
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            15803 54 -     18578 tgctgag---------gatgag-------------------gagt---a-act-ggaattct--cat--aaattgc-ttgtag-gac-tgc---a---ag---------------------------------------------------------------
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              1190 54 +     47717 tgctgag---------gatgag-------------------gagt---a-act-ggaattct--cat--aaattgc-ttgtag-gac-tgc---a---ag---------------------------------------------------------------
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             1320 54 -      3544 tgctgag---------gatgag-------------------gagt---a-act-ggaattct--cat--aaattgc-ttgtag-gac-tgc---a---ag---------------------------------------------------------------
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             12540 54 +     50774 tgctgag---------gatgag-------------------gagt---a-act-ggaattct--cat--aaattgc-ttgtag-gac-tgc---a---ag---------------------------------------------------------------
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183698 77 +    412891 ------gga-tta---gg--aa-------------------c------a-act-ggaact----ctcctaaattgc-tggtaa-gag-tac--caaaata---g---tatgacc--------a-ct-----ttgga-aaa--ca--a------t--t-----t
i Anoura_caudifer.AnoCau_scaffold_1412                   I 7 I 4
s Aotus_azarae.k141_3104676                                  13163 54 -     33861 tgctgag---------gatgag-------------------gagt---a-act-ggaattct--cat--aaattgc-ttgtag-gac-tgc---a---ag---------------------------------------------------------------
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            13183 54 -     34016 tgctgag---------gatgag-------------------gagt---a-act-ggaattct--cat--aaattgc-ttgtag-gac-tgc---a---ag---------------------------------------------------------------
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4295580 54 -   5030052 TGCTGAG---------GATGAG-------------------GAGT---A-ACT-GGAATTCT--CAT--AAATTGC-TTGTAG-GAC-TGC---A---AG---------------------------------------------------------------
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             13185 54 -     34685 tgctgag---------gatgag-------------------gagt---a-act-ggaattct--cat--aaattgc-ttgtag-gac-tgc---a---ag---------------------------------------------------------------
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               26306 54 -     47192 tgctgag---------gatgag-------------------gagt---a-act-ggaattct--cat--aaattgc-ttgtag-gac-tgc---a---ag---------------------------------------------------------------
i Aotus_vociferans.k141_344750                           C 0 C 0
s Arctocebus_calabarensis.k141_2318572                        9556 71 +     14667 --------------------------------------------c---a-act-ggaacacc--cac--aaattgc-tggtag-aag-aga---a---aa---atggtCTGAGC--------T-CTTCAACTTTGt-gaa--ta--a------a--t-----t
i Arctocebus_calabarensis.k141_2318572                   I 7 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3109 78 +     43469 ------gga-tca---gg--gg-------------------c------a-act-agaact----ctcctaagtcac-tggtaa-gagatac--caaaata---g---tatgacc--------a-ct-----ctgga-aaa--ca--g------t--t-----t
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 7 I 4
s Avahi_laniger.k141_765380                                  51880 82 -     92717 tgatgag---------gatgag-------------------gagc---a-act-agaactct--cat--aaattgc-tggtag-gag-ttt---a---aa---atggtatgaca--------t-ct----t-ttca-aaa--ta--g------t--t-----t
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              52509 82 +     85213 tgatgag---------gatgag-------------------gagc---a-act-agaactct--cat--aaattgc-tggtag-gag-ttt---a---aa---atggtatgaca--------t-ct----t-ttca-aaa--ta--g------t--t-----t
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             2926 54 -     10423 tgatgag---------gatgag-------------------gagt---a-act-ggaattct--cat--aaattgc-ttgtag-gac-tgc---a---ag---------------------------------------------------------------
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             22426 54 +     31915 tgctgag---------gatgag-------------------gagt---a-act-ggaattct--cat--aaattgc-ttgtag-gac-tgc---a---ag---------------------------------------------------------------
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            2896 54 +      5267 tgctgag---------gatgag-------------------gagt---a-act-ggaattct--cat--aaattgc-ttgtag-gac-tgc---a---ag---------------------------------------------------------------
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23588110 54 - 189096842 tgctgag---------gatgag-------------------gagt---a-act-ggaattct--cat--aaattgc-ttgtag-gac-tgc---a---ag---------------------------------------------------------------
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              9640 54 -     12001 tgctgag---------gatgag-------------------gagt---a-act-ggaattct--cat--aaattgc-ttgtag-gac-tgc---a---ag---------------------------------------------------------------
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10001049 50 -  17673402 ---------------------------------------------------------------------aaattgc-aggtag-ggg-taa---aaaatg---g---tatgacc--------t-ct-----ttgca-aaa--ca--g------t--t-----t
i Camelus_bactrianus.KN276810.1                          I 28 I 4
s Camelus_dromedarius.KN272107.1                           2333507 50 -   7040546 ---------------------------------------------------------------------aaattgc-aggtag-ggg-taa---aaaatg---g---tatgacc--------t-ct-----ttgca-aaa--ca--g------t--t-----t
i Camelus_dromedarius.KN272107.1                         I 28 I 4
s Camelus_ferus.KB017975.1                                  401789 50 -   1652518 ---------------------------------------------------------------------aaattgc-aggtag-ggg-taa---aaaatg---g---tatgacc--------t-ct-----ttgca-aaa--ca--g------t--t-----t
i Camelus_ferus.KB017975.1                               I 28 I 4
s CanFam4.chr16                                           17797927 79 -  60362399 taataag--c--a-t--g--ag-------------------t------g-act-agaagt----ctcacaaaccgc-tggtag-gag-tgc---aaaatg---g---tgtgacc--------a-ct-----tttga-gaa--ca--g------t--t-----t
i CanFam4.chr16                                          C 0 I 4
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    183984 79 -    185531 taataag--c--a-t--g--ag-------------------t------g-act-agaagt----ctcacaaaccgc-tggtag-gag-tgc---aaaatg---g---tgtgacc--------a-ct-----tttga-gaa--ca--g------t--t-----t
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 I 4
s Canis_lupus_dingo.QKWQ01000480.1                         9033370 79 -   9314153 taataag--c--a-t--g--ag-------------------t------g-act-agaagt----ctcacaaaccgc-tggtag-gag-tgc---aaaatg---g---tgtgacc--------a-ct-----tttga-gaa--ca--g------t--t-----t
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 4
s Canis_lupus_familiaris.chr16                            17957635 79 -  59632846 taataag--c--a-t--g--ag-------------------t------g-act-agaagt----ctcacaaaccgc-tggtag-gag-tgc---aaaatg---g---tgtgacc--------a-ct-----tttga-gaa--ca--g------t--t-----t
i Canis_lupus_familiaris.chr16                           C 0 I 4
s Canis_lupus_orion.HG994398.1                            18498973 79 +  63665305 taataag--c--a-t--g--ag-------------------t------g-act-agaagt----ctcacaaaccgc-tggtag-gag-tgc---aaaatg---g---tgtgacc--------a-ct-----tttga-gaa--ca--g------t--t-----t
i Canis_lupus_orion.HG994398.1                           C 0 I 4
s Carlito_syrichta.NW_007259797.1                           154185 46 -    496798 TGATGAA---------GATGAG-------------------GAAT---A-ACT-GAAACTCT--CCT--ATATTGC-TGATGG-A------------------------------------------------------------------------------
i Carlito_syrichta.NW_007259797.1                        C 0 I 31
s Carollia_perspicillata.CarPer_scaffold_92756                3472 77 -     11696 ------gga-tca---ga--ag-------------------c------a-act-ggaact----ctcctaaattgc-tggtaa-gag-tac--caaaata---g---gatgacc--------a-ct-----ttgga-aaa--ca--g------t--t-----t
i Carollia_perspicillata.CarPer_scaffold_92756           I 7 I 4
s Catagonus_wagneri.CatWag_scaffold_2839                     91652 50 +    217609 ---------------------------------------------------------------------aaattgc-tggtag-gag-tac---aaagtg---t---tatgacc--------a-ct-----ttaga-aaa--ca--g------t--t-----t
i Catagonus_wagneri.CatWag_scaffold_2839                 I 28 I 4
s Cebuella_niveiventris.k141_1251222                          7550 54 -     11392 tgatgag---------gatgag-------------------gagt---a-act-agaattct--cat--aaattgc-ttgtag-gac-tgc---a---ag---------------------------------------------------------------
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               3648 54 -      7577 tgatgag---------gatgag-------------------gagt---a-act-ggaattct--cat--aaattgc-ttgtag-gac-tgc---a---ag---------------------------------------------------------------
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_olivaceus.k141_1000828                                1586 54 -      2944 TGCTGAG---------GACGAG-------------------GAGT---A-ACT-GGAATTCT--CAT--AAATTGC-TTGTAG-GAC-TGC---A---AG---------------------------------------------------------------
i Cebus_olivaceus.k141_1000828                           C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         3696 46 +     31688 tgatgaa---------gatgaa-------------------gaac---a-act-gaaactct--cct--atattgc-tgatgg-a------------------------------------------------------------------------------
i Cephalopachus_bancanus.k141_1423433                    C 0 I 31
s Ceratotherium_simum.JH767749.1                          12230048 82 +  27778364 tgacaaggatg--g--gg--ag-------------------c------a-act-ggaact----ctcataaagtgc-tggtag-gag-tac---aaattg---g---tatgacc--------a-ct-----ttgga-aaa--ca--g------t--t-----t
i Ceratotherium_simum.JH767749.1                         C 0 I 4
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1075 82 -     25243 tgacaaggatg--g--gg--ag-------------------c------a-act-ggaact----ctcataaagtgc-tggtag-gag-tac---aaattg---g---tatgacc--------a-ct-----ttgga-aaa--ca--g------t--t-----t
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 I 4
s Cercocebus_atys.KQ010504.1                               4473168 79 +   4669795 tgatgag---------gatgag-------------------GAGT---A-ATT-GGAATTCT--CAT--AAATTGC-CTGTAG-GAA-TGC---A---AG---atggtataacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        11715 79 -     19203 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ctgtag-gaa-tgc---a---ag---atggtataacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           6137 79 +      8260 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ctgtag-gaa-tgc---a---ag---atggtataacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           6364 79 +     27781 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ctgtag-gaa-tgc---a---ag---atggtataacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         6520 78 -     20310 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ctgtag-gaa-tgc---a---ag---atggtataacc--------a-ct-----ttgga-a--------g------t--t-----t
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           9499 78 +     29689 cgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ctgtag-gaa-tgc---a---ag---atggtataacc--------a-ct-----ttgga-a--------g------t--t-----t
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            3929 79 +      9989 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ctgtag-gaa-tgc---c---ag---atggtataacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          12177 79 -     27936 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ctgtag-gaa-tgc---a---ag---atggtataacc--------t-ct-----ttgga-a-----a--g------t--t-----t
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            1053 79 -     17152 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ctgtag-gaa-tgc---a---ag---atggtataacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38814581 79 +  39242232 cgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ctgtag-gaa-tgc---a---ag---atggtataacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21220282 79 -  21565898 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ctgtag-gaa-tgc---a---ag---atggtataacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       37401 79 -     53127 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ctgtag-gaa-tgc---a---ag---atggtataacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        4661 79 +      7159 cgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ctgtag-gaa-tgc---a---ag---atggtataacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       12204 79 -     27947 cgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ctgtag-gaa-tgc---a---ag---atggtataacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         12177 79 +     17596 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ctgtag-gga-tgc---a---ag---atggtataacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          1400 79 +     26000 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ctgtag-gaa-tgc---a---ag---atggtataacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            6109 18 -      6351 TGGAGAG---GCGGT-GG--GG-------------------C------C------------------------------------------------------------------------------------------------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       I 6 I 40
s Cheirogaleus_major.k141_333249                             19296 82 -     52598 tggtgag---------gatgag-------------------aagc---a-act-agaactct--cat--aaattgc-tggtag-gag-ttt---a---aa---atggtatgacc--------t-ct----t-ttca-aaa--ta--g------t--t-----t
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           14641 82 +     57038 tggtgag---------gatgag-------------------aagc---a-act-agaactct--cat--aaattgc-tggtag-gag-ttt---a---aa---atggtatgacc--------t-ct----t-ttca-aaa--ta--g------t--t-----t
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chlorocebus_aethiops.ctg25                              18426148 79 -  18827391 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ctgtag-gaa-tgc---a---ag---atggtataacc--------a-ct-----ttgga-a-----a--g------t--t-----c
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       12586 79 -     50209 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ctgtag-gaa-tgc---a---ag---atggtataacc--------a-ct-----ttgga-a-----a--g------t--t-----c
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135419586 79 + 135778131 tgatgag---------gatgag-------------------GAGT---A-ATT-GGAATTCT--CAT--AAATTGC-CTGTAG-GAA-TGC---A---AG---ATgctataacc--------a-ct-----ttgga-a-----a--g------t--t-----C
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 16482 52 +     19366 tgataaggatg---t-ga--ag-------------------c------a-acc-ggcact----gtcataaattgt-tggtgg-gaa-ggc---a--------------------------------------------------------------------
i Choloepus_didactylus.ChoDid_scaffold_45914             I 6 I 22
s Choloepus_hoffmanni.KN194906.1                            171581 52 +    839153 tgataaggatg---t-ga--ag-------------------c------a-acc-ggcact----gtcataaattgt-tggtgg-gaa-ggc---a--------------------------------------------------------------------
i Choloepus_hoffmanni.KN194906.1                         I 6 I 22
s Chrysochloris_asiatica.ChrAsi_scaffold_2561901               138 66 -       464 ------------------------------------------------a-act-gaaatt----ctcataaattgc-tggtgg-aaa-tac---aaaatg---t---taaggcc--------a-ca-----ttgga-aaaa-ta--a------t--t-----t
i Chrysochloris_asiatica.ChrAsi_scaffold_2561901         n 94 I 4
s Colobus_angolensis.KN981557.1                            1908102 79 +   2368649 tgatgag---------gatgag-------------------GAGT---A-ATT-GGAATTCT--CAT--AAATTGC-TTGTAG-GAA-TGC---A---AG---Atggtataacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199947778 79 + 200372422 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ttgtag-gaa-tgc---a---ag---atggtataacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              34640 79 +     84244 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ttgtag-gaa-tgc---a---ag---atggtataacc--------a-ct-----ttgga-g-----a--g------t--t-----t
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17547222 52 -  53390261 tgatgagaatg-a---gg--ag-------------------c------a-act-agaata----ttcataaattgc-tgacag-gta-tgc---a--------------------------------------------------------------------
i Condylura_cristata.JH655891.1                          C 0 I 30
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          12608 80 -     20389 tgatgaggatg-a---gg--ag-------------------c------a-acg-ggaact------cataaatttc-tgggaa-gaa-tag---aaaata---g---tatgact--------a-ct-----ttgta-aaa--ca--g------c--t-----g
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 9 I 4
s Crocidura_indochinensis.CroInd_scaffold_37019               1543 34 -     19598 TTATGAA---GATTA-AG--AC-------------------C------T-ACTAGAAATG----TTC--GAA-------------------------------------------------------------------------------------------
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 I 2
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27095 82 -     87169 taatgag--cata-a-gg--ag-------------------t------g-agt-ggaagt----ctcataaactgc-tggaag-gag-tac---aaaatg---g---tataacc--------a-ct-----tttga-aaa--ca--g------t--t-----t
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 4
s Daubentonia_madagascariensis.ctg71                      12535503 82 -  12879189 tgacgag---------gatgag-------------------gagc---a-act-ggaactct--cat--aaatcgc-tggtag-gag-tgc---a---aa---gtggtgtgacc--------t-ct----t-ttga-aaa--ta--g------t--t-----t
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8628502 77 +  20541912 ------gga-tca---gg--ag-------------------c------a-act-ggaact----ctcccaaattgc-tggtaa-ggg-tac--taagata---g---tatgacc--------a-ct-----ttgga-aaa--ca--g------t--t-----t
i Desmodus_rotundus.KZ672289.1                           I 7 I 4
s Dicerorhinus_sumatrensis.PEKH010002091.1                  671899 82 +   1390856 tgatgaggatg-a---gg--ag-------------------c------a-act-ggaaca----ctcataaattgc-tggaag-gag-tac---aaattg---g---tatgacc--------a-ct-----ttgga-aaa--ca--g------t--t-----t
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 4
s Diceros_bicornis.DicBicMic_scaffold_5955                    4656 82 +    198055 tgacgaggatg--g--gg--ag-------------------c------a-act-ggaact----ctcataaattgc-tggtag-gag-tac---aaattg---g---tatgacc--------a-ct-----ttgga-aaa--ca--g------t--t-----t
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 4
s Echinops_telfairi.JH980293.1                            48778118 63 + 111700974 ------------------------------------------------a-atc-agaa------ctcataatttt---ggtga-aaa-tgt---aaaatg---c---tatgacc--------a-cc-----tgggggaaaaa-a--a------t--t-----t
i Echinops_telfairi.JH980293.1                           I 16 I 8
s Eidolon_helvum.KE759718.1                                   9133 81 +     11740 taataaggacg-a---ag--ag-------------------c------a-act-ggaact----ctcata-attgc-tggtag-gag-tac---aaaata---g---tatgacc--------a-ct-----ttgga-aaa--ca--g------a--t-----g
i Eidolon_helvum.KE759718.1                              C 0 I 4
s Enhydra_lutris.KZ291758.1                               16327937 79 -  41312741 taacgagtatg-a---gg--aa-------------------t------g-act--gaaat----ctc--aaactgc-tgatag-gag-tgc---aaaacg---g---tgtgacc--------a-ct-----tctga-aaa--ca--g------t--t-----t
i Enhydra_lutris.KZ291758.1                              C 0 I 4
s Equus_asinus.JREZ01000139.1                              1281960 82 +   4378816 tgatggggatg-a---gg--ag-------------------c------a-aat-ggaact----ctcataaattac-tggtag-gag-tac---aaatta---g---tataacc--------a-ct-----ttgga-aaa--ca--g------t--t-----c
i Equus_asinus.JREZ01000139.1                            C 0 I 4
s Equus_caballus.CM000403.2                               18529781 82 -  39960074 tgatggggatg-a---gg--ag-------------------c------a-aat-ggaact----ctcataaattac-tggtag-gag-tac---aaattg---g---tataacc--------a-ct-----ttgga-aaa--ca--g------t--t-----c
i Equus_caballus.CM000403.2                              C 0 I 4
s Equus_przewalskii.KK951119.1                               31796 82 +    498745 tgatggggatg-a---gg--ag-------------------c------a-aat-ggaact----ctcataaattac-tggtag-gag-tac---aaattg---g---tataacc--------a-ct-----ttgga-aaa--ca--g------t--t-----c
i Equus_przewalskii.KK951119.1                           C 0 I 4
s Erythrocebus_patas.Contig38                             21202776 79 -  21539334 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ctgtag-gaa-tgc---a---ag---atggtataacc--------a-ct-----ttgga-a-----a--g------t--t-----c
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              11988 82 -     14127 tgatgag---------gatgag-------------------gagc---a-act-agaactct--cat--aaattgc-tggtag-gag-ttt---a---aa---atggtatgacc--------t-ct----t-ttca-aaa--ta--g------t--t-----t
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                4686 82 -     16928 tgatgag---------gatgag-------------------gagc---a-act-agaactct--cat--aaattgc-tggtag-gag-ttt---a---aa---atggtatgacc--------t-ct----t-ttca-aaa--ta--g------t--t-----t
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              13723 82 -     25546 tgatgag---------aatgag-------------------gagc---a-act-agaactct--cat--aaattgc-tggtag-gag-ttt---a---aa---atggtatgacc--------t-ct----t-ttca-aaa--ta--g------t--t-----t
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            10913 82 +     26330 tgatgag---------gatgag-------------------gagc---a-act-agaactct--cat--aaattgc-tggtag-gag-ttt---a---aa---atggtatgacc--------t-ct----t-ttca-aa--cta--g------t--t-----t
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 12152 82 +     23973 tgatgag---------gatgag-------------------gagc---a-act-agaactct--cat--aaattgc-tggtag-gag-ttt---a---aa---atggtatgacc--------t-ct----t-ttca-aaa--ta--g------t--t-----t
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                10913 82 +     75513 tgatgag---------gatgag-------------------gagc---a-act-agaactct--cat--aaattgc-tggtag-gag-ttt---a---aa---atggtatgacc--------t-ct----t-ttca-aa--cta--g------t--t-----t
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  8855 82 +     97555 tgatgag---------gatgag-------------------gagc---a-act-agaactct--cat--aaattgc-tggtag-gag-ttt---a---aa---atggtatgacc--------t-tt----t-ttca-aaa--ta--g------t--t-----t
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            11791 82 +     26496 tgatgag---------gatgag-------------------gagc---a-act-agaactct--cat--aaattgc-tggtag-gag-ttt---a---aa---atggtatgacc--------t-ct----t-ttca-gaa--ta--g------t--t-----t
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  2388 82 -     17153 tgatgag---------gatgag-------------------gagc---a-act-agaactct--cat--aaattgc-tggtag-gag-ttt---a---aa---atggtatgacc--------t-ct----t-ttca-aaa--ta--g------t--t-----t
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              11964 82 +    111500 tgatgag---------gatgag-------------------gagc---a-act-agaactct--cat--aaattgc-tggtag-gag-ttt---a---aa---atggtatgacc--------t-ct----t-ttca-aaa--ta--g------t--t-----t
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20235791 80 + 206538554 taatgag--c-ctaa-gg--ag-------------------t------g-agt-gcaagt----ctc--aaactgc-tggaag-aag-tac---aaaatg---g---tgtaacc--------a-ct-----tttga-aaa--ca--g------t--t-----t
i Felis_catus.CM001381.2                                 C 0 I 4
s Felis_catus_fca126.CM031415.1                           20194634 80 + 205367284 taatgag--c-ctaa-gg--ag-------------------t------g-agt-gcaagt----ctc--aaactgc-tggaag-aag-tgc---aaaatg---g---tgtaacc--------a-ct-----tttga-aaa--ca--g------t--t-----t
i Felis_catus_fca126.CM031415.1                          C 0 I 4
s Felis_nigripes.FelNig_flattened_line_20823                  8148 80 -     36744 taatgag--c-ctaa-gg--ag-------------------t------g-agt-gcaagt----ctc--aaactgc-tggaag-aag-tac---aaaatg---g---tgtaacc--------a-ct-----tttga-aaa--ca--g------t--t-----t
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 4
s Galago_moholi.ctg2040                                     424549 45 -    453645 --------------------------------------------------------------------------------TAG-AAG-AGA---A---AA---ATGGTCTGACC--------T-CTTTAACTTTat-aaa--ta--a------a--t-----t
i Galago_moholi.ctg2040                                  I 30 C 0
s Galago_senegalensis.k141_631886                             2256 45 +     11339 --------------------------------------------------------------------------------TAG-AAG-AGA---A---AA---ATGGTCTGACC--------T-CTTTAACTTTat-aaa--ta--a------a--t-----t
i Galago_senegalensis.k141_631886                        I 30 C 0
s Galagoides_demidoff.k141_1959596                            6064 45 +      6795 --------------------------------------------------------------------------------tag-aag-aga---a---aa---atggtccgacc--------t-ctttAACTTTGt-gaa--ta--a------a--t-----t
i Galagoides_demidoff.k141_1959596                       I 30 C 0
s Galeopterus_variegatus.GalVar_scaffold_197845               2257 76 -      3123 tgatgag---------gctgag-------------------g------a-act-ggaactct--cat--aagttgc-tggtag-gag-tgc---a---ga---c---tacgacc--------a-ct-----tttga-aaa--ca--g------t--t-----t
i Galeopterus_variegatus.GalVar_scaffold_197845          C 0 C 0
s Gorilla_beringei.k141_3596273                              13544 81 -     32273 tgatcag---------gatgag-------------------gaat---a-act-ggaattct--cat--aaattgc-ttgtag-gaa-tgc---a---ag---atggtataacc--------a-ct-----ttgga-a-----acag------t--t-----t
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186335692 81 + 186649187 tgatgag---------gatgag-------------------gagt---a-act-ggaattct--cat--aaattgc-ttgtag-gaa-tgc---a---ag---atggtataacc--------a-ct-----ttgga-a-----acag------t--t-----t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           5042 82 -     19426 tgatgag---------gatgag-------------------gagc---a-act-agaactct--cat--atattgc-tggtag-gag-ttt---a---aa---atggtatgaac--------t-ct----t-ttca-aaa--ta--g------t--t-----t
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             10191 82 -     15286 tgatgag---------gatgag-------------------gagc---a-act-agaactct--cat--atattgc-tggtag-gag-ttt---a---aa---atggtatgacc--------t-ct----t-ttca-aaa--ta--g------t--t-----t
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             11830 82 +     18253 tgatgag---------gatgag-------------------gagc---a-act-agaactct--cat--atattgc-tggtag-gag-ttt---a---aa---atggtatgacc--------t-ct----t-ttca-aaa--ta--g------t--t-----t
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         11931 82 -     41752 tgatgag---------gatgag-------------------gagg---a-act-agaactct--cat--atattgc-tggtaa-gag-ttt---a---aa---atggtatgacc--------t-ct----t-ttca-aaa--ta--g------t--t-----t
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         11769 82 -     16460 tgatgag---------gatgag-------------------gagc---a-act-agaactct--cat--atattgc-tggtag-gag-ttt---a---aa---atggtatgacc--------t-ct----t-ttca-aaa--ta--g------t--t-----t
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               240940 82 +    327341 taaggagca-tca---gg--aa-------------------t------g-agc-caaagt----ctcataaactgc-tggaag-gag-tac---aaaatg---g---tataatc--------a-ct-----tttga-aaa--ca--g------t--t-----t
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 4
s Heterohyrax_brucei.HetBruBak_scaffold_403422                 299 67 -       893 ------------------------------------------------a-acc-agacgc----ctcatgaactgc-tggtgg-gga-tgt---gaaatg---c---tatgacc--------a-ct-----ttgga-aaaaaga--g------c--t-----t
i Heterohyrax_brucei.HetBruBak_scaffold_403422           I 17 I 4
s Hipposideros_armiger.JXIK01000431.1                       110403 82 +   1711038 tgacgaggatg-a---gg--ag-------------------c------a-act-gtaatt----ctcataaatttc-tggcag-gag-cat---aaaaga---g---tgtgatt--------a-tg-----ttaaa-aaa--ta--g------t--t-----a
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 4
s Hipposideros_galeritus.HipGal_scaffold_29171               41826 82 +     43066 tgatgaggatg-a---gg--ag-------------------c------a-act-gtcatt----ctcataaatatc-tggcag-gag-tat---aaaata---g---tgtgatt--------a-tg-----ttaaa-aaa--ca--g------c--t-----a
i Hipposideros_galeritus.HipGal_scaffold_29171           I 85 I 8
s Hoolock_leuconedys.ctg274                                    432355 81 +    630532 tgatgag---------gatgag-------------------gagt---a-act-ggaattct--cat--aaattgc-ttgtag-gaa-tgc---a---ag---atggtataacc--------a-ct-----ttgga-a-----acag------t--t-----t
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  43072 82 +     55795 taatgaa--cata-a-gg--ag-------------------t------t-agt-ggaagt----ctcataaactgc-tggaag-gag-tac---aaaatg---g---tataacc--------a-at-----tttga-aaa--ca--g------g--t-----t
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 4
s Hylobates_agilis.k141_307679                               15292 60 -     15490 tgatgag---------gatgag-------------------gagt---a-act-ggaattct--cat--aaattgc-ttgtag-gaa-tgc---a---ag---atggta------------------------------------------------------
i Hylobates_agilis.k141_307679                           C 0 N 0
s Hylobates_klossii.k141_282416                              57298 55 +     67168 tgatgag---------gatgag-------------------gagt---a-act-ggaattct--cat--aaattgc-ttgtag-gaa-tgc---a---ag---a-----------------------------------------------------------
i Hylobates_klossii.k141_282416                          C 0 N 0
s Hylobates_pileatus_b.LG02                                     189540948 81 - 191637585 tgatgag---------gatgag-------------------gagt---a-act-ggaattct--cat--aaattgc-ttgtag-gaa-tgc---a---ag---atggtataacc--------a-ct-----ttgga-a-----acag------t--t-----t
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3333842 81 -  11177569 tgatgaa---------gatgag-------------------gagt---a-act-ggaattct--cat--aaattgc-ttgtag-gaa-tgc---a---ag---atggtataacc--------a-ct-----ttgga-a-----acag------t--t-----t
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_3655594                                   20736 82 +     31101 tgatgag---------gatgag-------------------gagc---a-act-agaactct--cat--aaattgc-tggtag-gag-ttt---a---aa---atggtatgacc--------t-gt----t-ttca-aaa--ta--g------t--t-----t
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15522293 39 -  30322482 tgatgag---------gatgag-------------------gagc---a-act-agaactct--cat--atattgc---------------------------------------------------------------------------------------
i Lemur_catta.scaffold_24                                C 0 I 27
s Leontocebus_fuscicollis.k141_1820339                        5290 54 +     64341 TGCTGAG---------GATGAG-------------------GAGT---A-ACT-GGAATTCT--CAT--AAATTGC-TTGTAG-GAC-TGC---a---aa---------------------------------------------------------------
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           2351 54 +      4941 TGCTGAG---------GATGAG-------------------GAGT---A-ACT-GGAATTCT--CAT--AAATTGC-TTGTAG-GAC-TGC---A---aa---------------------------------------------------------------
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        5217 54 +     35603 tgctgag---------gatgag-------------------gagt---a-act-ggaattct--cat--aaattgc-ttgtag-gac-tgc---a---ag---------------------------------------------------------------
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    26690 54 +     38576 TGCTGAG---------GATGAG-------------------GAGT---A-ACT-GGAATTCT--CAT--AAATTGC-TTGTAG-GAC-TGC---a---ag---------------------------------------------------------------
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         23387 54 +     66356 TGCTGAG---------GATGAG-------------------GAGT---A-ACT-GGAATTCT--CAT--AAATTGC-TTGTAG-GAC-TGC---a---ag---------------------------------------------------------------
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          9174 82 -     23766 tgatgag---------gatgag-------------------gagc---a-aca-agacctct--cat--aaattgt-tggtag-gag-ttt---a---aa---atcacatgacc--------t-ct----t-ttca-aaa--ta--g------t--t-----t
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             27239 82 +     45836 tgatgag---------gatgag-------------------gagc---a-aca-agacctct--cat--aaattgt-tggtag-gag-ttt---a---aa---atcacatgacc--------t-ct----t-ttca-aaa--ta--g------t--t-----t
i Lepilemur_dorsalis.k141_577674                         I 118 C 0
s Lepilemur_ruficaudatus.k141_320948                          1345 82 -      1719 tgatgag---------gatgag-------------------gagc---a-act-agacctct--cat--aaattgc-tggtag-gag-ttt---a---aa---atggtatgacc--------t-ct----t-ttca-aaa--ta--g------t--t-----t
i Lepilemur_ruficaudatus.k141_320948                     C 0 I 10
s Lepilemur_septentrionalis.k141_185316                      25176 82 +     54090 tgatgag---------gatgag-------------------gagc---a-aca-agacctct--cat--aaattgt-tggtag-gag-ttt---a---aa---atcacatgacc--------t-ct----t-ttca-aaa--ta--g------t--t-----t
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.APMU01168965.1                       717 81 -      1094 taatgagcatg-a---gg--ag-------------------t------g-act--gaagt----ctcataagctgc-tgatag-gag-tgc---aaaatg---g---tgtgacc--------a-ct-----tttga-aaa--ca--g------t--t-----t
i Leptonychotes_weddellii.APMU01168965.1                 C 0 I 228
s Lepus_americanus.LepAme_scaffold_107385                     4144 90 -     14121 ---------------------cactaaatgaggttgagaagg------a-act-gaaact----caa--aaatcactttgtag-aag-tga---a---taatgg---tatgaac--------a-ct-----tttga-aaa--ca--g------t--tttctaa
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1434720 72 +   1826925 ----------------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ctgtag-gaa-tgc---a---ag---atggtataacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Lophocebus_aterrimus.ctg367                            I 7 C 0
s Loris_lydekkerianus.k141_2539221                            3982 71 +     11245 --------------------------------------------c---a-act-ggaacacc--cac--aaattgc-tggtag-aag-aga---a---aa---atggtctgacc--------t-cttCAACTTTGt-gaa--ta--a------a--t-----t
i Loris_lydekkerianus.k141_2539221                       I 7 C 0
s Loris_tardigradus.ctg83                                  1002820 72 +   6120653 --------------------------------------------C---A-ACT-GGAACACC--CAC--AAATTGC-TGGTAGAAAG-AGA---A---AA---ATGGTCTGACC--------T-CTTCAACTTTGT-Gaa--ta--a------a--t-----t
i Loris_tardigradus.ctg83                                I 7 C 0
s Loxodonta_africana.GL010049.1                            4215622 66 -  43346337 ------------------------------------------------a-aat-ggaact----ctcagaaattgc-tggtgg-aaa-tgt---aaaatg---c---tgtgacc--------a-ct-----ttgga-aaaa-ta--g------t--t-----g
i Loxodonta_africana.GL010049.1                          I 17 I 4
s Lycaon_pictus.CM007581.1                                17953875 79 -  59628241 taataag--c--a-t--g--ag-------------------t------g-act-agaagt----ctcacaaaccgc-tggtag-gag-tgc---aaaatg---g---tgtgacc--------a-ct-----tttga-gaa--ca--g------t--t-----t
i Lycaon_pictus.CM007581.1                               C 0 I 4
s Macaca_arctoides.k141_2326796                               4526 79 +     40492 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ctgtag-gaa-tgc---a---ag---atggtatagcc--------a-ct-----ttgga-a-----a--g------t--a-----t
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59673788 79 +  60120075 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ctgtag-gaa-tgc---a---ag---atggtatagcc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 10282 79 -     26193 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ctgtag-gaa-tgc---a---ag---atggtatagcc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            78086 79 -    114318 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ctgtag-gaa-tgc---a---ag---atggtatagcc--------a-ct-----ttgga-a-----a--g------t--c-----t
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  3785 79 -     23192 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ctgtag-gaa-tgc---a---ag---atggtatagcc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                13245 79 -     29190 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ctgtag-gaa-tgc---a---ag---atggtgtagcc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  21813 79 +     37952 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ctgtag-gaa-tgc---a---ag---atggtgtagcc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186836901 79 + 187317192 tgatgag---------gatgag-------------------GAGT---A-ATT-GGAATTCT--CAT--AAATTGC-CTGTAG-GAA-TGC---A---ag---atggtatagcc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25455464 79 -  25927173 tgatgag---------gatgag-------------------GAGT---A-ATT-GGAATTCT--CAT--AAATTGC-CTGTAG-GAA-TGC---A---ag---atggtatagcc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  77662 79 +     89720 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ctgtag-gaa-tgc---a---ag---atggtgtagcc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 4659 79 +     20474 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ctgtag-gaa-tgc---a---ag---atggtatagcc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   4461 79 -     14993 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ctgtag-gaa-tgc---a---ag---atggtatagcc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  327331 79 -    668171 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ctgtag-gaa-tgc---a---ag---atggtgtagcc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 2771 79 -     24072 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ctgtag-gaa-tgc---a---ag---atggtatagcc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               23400 79 -     45290 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ctgtag-gaa-tgc---a---ag---atggtgtagcc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 89207 82 +     94391 tgataaggacg-a---ag--ag-------------------c------a-act-ggaact----ctcataaattgt-tggtag-gag-tac---aaaata---g---tatgacc--------a-ct-----ttgga-aaa--ca--g------a--t-----g
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 4
s Mandrillus_leucophaeus.scaffold280                      23934987 79 -  24302211 tgatggg---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ctgtag-gaa-tgc---a---ag---atggtataacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               349120 79 +    752769 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ctgtag-gaa-tgc---a---ag---atggtataacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              18065 82 +    737560 tgatgag--c-aaga-gg--aa-------------------c------a-act-ggaacg----ctcataaattgc-tccaag-gtg-cac---aaaatg---g---tatgacc--------a-ct-----tttga-aca--ta--g------t--t-----t
i Manis_javanica.JSZB01003497.1                          C 0 I 4
s Manis_pentadactyla.KN006162.1                              49449 82 -    317179 tgatgag--c-aaga-gg--aa-------------------c------a-act-ggaatg----ctcataaattgc-tccaag-gtg-cgc---aaaatg---g---tctgacc--------a-ct-----tttga-aca--ta--g------t--t-----t
i Manis_pentadactyla.KN006162.1                          C 0 I 4
s Megaderma_lyra.MegLyr_scaffold_4542                         8944 82 -    207569 tgatgaggatg-a---gg--ag-------------------c------a-acc-agaact----ctcataaatttc-tggtgg-gag-taa---aaaata---g---tatgact--------a-ct-----ttgga-aaa--ca--c------c--t-----c
i Megaderma_lyra.MegLyr_scaffold_4542                    I 9 I 4
s Mellivora_capensis.MelCap_flattened_line_69365              8655 79 +     13704 taatgagtatg-a---gg--aa-------------------t------g-act--gaaat----ctc--aaacggc-tggtag-gag-tgc---aaaatg---g---tgtgacc--------a-ct-----tctga-aaa--ca--g------t--t-----t
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 4
s Mico_argentatus.k141_1239457                                3472 54 -      7380 tgatgag---------gatgag-------------------gagt---a-act-ggaattct--cat--aaattgc-ttgtag-gac-tgc---a---ag---------------------------------------------------------------
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               2538 54 +     18990 tgatgag---------gatgag-------------------gagt---a-act-ggaattct--cat--aaattgc-ttgtag-gac-tgc---a---ag---------------------------------------------------------------
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      3477 54 -      7356 tgatgag---------gatgag-------------------gagt---a-act-ggaattct--cat--aaattgc-ttgtag-gac-tgc---a---ag---------------------------------------------------------------
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18289680 82 -  93316391 cagtgag---------gatgag-------------------aagc---a-act-agaacttt--cat--aaattgt-tggtag-gag-ttt---a---aa---atggtatgacc--------t-ct----t-ttca-aaa--ta--g------t--t-----t
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    17958 64 -    145209 ------------------------------------------------A-ATC-AGAA------CTCATAATTTTC-AGGTGC-AAA-TGT---AAAATG---T---TATGAAT--------G-CC-----TGGGG-A-GGGAA--A------T--C-----T
i Microgale_talazaci.MicTal_scaffold_6613                I 16 I 15
s Micronycteris_hirsuta.MicHir_scaffold_52381                14016 77 -     19307 ------gga-tca---gg--ag-------------------c------a-act-ggaact----gtcctaaactgc-tggtaa-gaa-tgc--caaaata---g---tgtgacc--------a-ct-----ttgga-aaa--ca--g------t--t-----t
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 7 I 4
s Miopithecus_ogouensis.k141_534055                           6707 79 -     28506 tgatgag---------ggtgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ctgtag-gaa-tgc---a---ag---atggtataacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         4131 81 -      8324 taatgagcatg-a---gg--ag-------------------t------g-act--gaagt----ctcataagctgc-tgatag-gag-tgc---aaaatg---g---tgtgacc--------a-ct-----tttga-aaa--ca--g------t--t-----t
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 213
s Mirza_zaza.k141_952172                                      7253 82 -     37649 cggtgag---------gatgag-------------------aagc---a-act-agaacttt--cat--aaattgt-tggtaa-gag-ttt---a---aa---atggtatgacc--------t-ct----t-ttcg-aaa--ta--g------t--t-----t
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 139911 40 -    366855 tgatgaggatg-a--------g-------------------c------a-gct-ggaact----ctcgtaaactcc-tggt----------------------------------------------------------------------------------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 27
s Mungos_mungo.MunMun_flattened_line_23663                   34047 82 +     37127 taaggagca-tca---ag--ga-------------------t------g-agc-caaagt----ctcataaactgc-tggaag-gag-tac---aaaatg---g---tataatc--------a-ct-----tttga-aaa--ca--g------t--t-----t
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 4
s Mustela_putorius.JH418006.1                               299830 79 -  14710649 taatgagtatg-a---gg--aa-------------------t------g-act--gaaat----ctc--aaactgc-tggtag-gag-tgc---aaaacg---g---tgtgacc--------a-ct-----tctga-aaa--ca--g------t--t-----t
i Mustela_putorius.JH418006.1                            C 0 I 4
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187405 52 +    196477 tgatgaggatg---t-gg--ag-------------------a------a-acc-ggaact----cttattaattgc-tgatgg-gag-ggc---a--------------------------------------------------------------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 6 I 22
s Nasalis_larvatus.k141_413338                               12703 79 +     21681 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ttgtag-gaa-tgc---a---ag---atggtgtaacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9148133 79 -   9404916 taataag--c--a-t--g--ag-------------------t------g-act-agaagt----ctcataaaccgc-tggtag-gag-tgc---aaaatg---g---tgtgacc--------a-ct-----tttga-gaa--ca--g------t--t-----t
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 4
s Nycticebus_bengalensis.LG01                            102577745 68 - 196305487 --------------------------------------------C---A-ACT-GGAACACC--CAC--AAATTGC-GGGTAG-AAG-AGA---A---AA---A---TCTGACC--------T-CTTCAACTTTGT-Gaa--ta--a------a--t-----t
i Nycticebus_bengalensis.LG01                            I 7 C 0
s Nycticebus_coucang.k141_5327727                             5431 68 +      8486 --------------------------------------------C---A-ACT-GGAACACC--CAC--AAATTGC-GGGTAG-AAG-AGA---A---AA---A---TCTGACC--------T-CTTCAACTTTGt-gaa--ta--a------a--t-----t
i Nycticebus_coucang.k141_5327727                        I 7 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105748172 68 + 199412804 --------------------------------------------C---A-ACT-GGAACACC--CAC--AAATTGC-AGGTAG-AAG-AGA---A---AA---A---TCTGACC--------T-CTTCAACTTTGT-Gaa--ta--a------a--t-----t
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 7 C 0
s Ochotona_princeps.JH802162.1                             1361227 68 +   3988456 ---------------------C-------------------c------a-agt-gaaact--ctcaa--aaattga-ctgcaa-aat-aga---a---aagtgg---aatgaat--------atct-----tttga-aaa--ta--g------t--t-----g
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              505279 81 -   2017862 taatgagcatg-a---gg--ag-------------------t------g-act--gaagt----ctcataaactgc-tggtag-gag-tgc---aaaatg---g---tgtgacc--------a-ct-----tttga-aaa--ca--g------t--t-----t
i Odobenus_rosmarus.KB229312.1                           C 0 I 4
s Oryctolagus_cuniculus.CM000791.1                        67144989 90 + 174332312 ---------------------CACTAAATgaggttgagaagg------a-act-gaaact----caa--aaatcactttgtag-aag-tga---a---taatgc---tatgaac--------a-ct-----tttga-aaa--ga--g------t--tttctaa
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       461107 69 -    559221 -----------------g--ag-------------------t------g-act-agaagt----ctcataaaccac-tggtag-gag-tgc---aaaatg---g---tgtgacc--------a-ct-----tttga-gaa--ca--g------t--t-----t
i Otocyon_megalotis.JAEUCK010005147.1                    I 10 I 4
s Otolemur_crassicaudatus.k141_222918                         2091 45 +      8798 --------------------------------------------------------------------------------TAG-AAG-AGA---A---AA---ATGGTCTGACC--------T-CTTTAACTTTGt-aaa--ta--a------a--t-----t
i Otolemur_crassicaudatus.k141_222918                    I 30 C 0
s Otolemur_garnettii.GL873799.1                             694255 45 -   1103335 --------------------------------------------------------------------------------tag-aag-aga---a---aa---atggtCTGACC--------T-CTTTAACTTTgt-aaa--ta--a------a--t-----t
i Otolemur_garnettii.GL873799.1                          I 30 C 0
s Pan_paniscus.KQ411613.1                                    41641 81 +     80009 tgatgag---------gatgag-------------------GAGT---A-ACT-GGAATTCT--CAT--AAATTGC-TTGTAG-GAG-TGC---A---AG---atggtataacc--------a-ct-----ttgga-a-----acag------t--t-----t
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03001836.1                             27565 81 +     51860 tgatgag---------gatgag-------------------GAGT---A-ACT-GGAATTCT--CAT--AAATTGC-TTGTAG-GAG-TGC---A---AG---atggtataacc--------a-ct-----ttgga-a-----acag------t--t-----t
i Pan_troglodytes.NBAG03001836.1                         I 68 I 294
s Panthera_onca.PanOnc_flattened_line_3271                  149799 82 +    230217 taatgag--cata-a-gg--ag-------------------t------g-agt-gaaagt----ctcacaaactgc-tggaag-aag-tac---aaaatg---g---tgcaacc--------a-ct-----tttga-aaa--ca--g------t--t-----t
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 4
s Panthera_pardus.KV860321.1                                263007 82 +  18783137 taatgag--cata-a-gg--ag-------------------t------g-agt-gaaagt----ctcacaaactgc-tggaag-aag-tac---aaaatg---g---tgcaacc--------a-ct-----tttga-aaa--ca--g------t--t-----t
i Panthera_pardus.KV860321.1                             C 0 I 4
s Panthera_tigris.KE722367.1                               4719642 82 -   8748460 taatgag--cata-a-gg--ag-------------------t------g-agt-gaaagt----ctcacaaactgc-tggaag-aag-tac---aaaatg---g---tgcaacc--------a-ct-----tttga-aaa--ca--g------t--t-----t
i Panthera_tigris.KE722367.1                             C 0 I 4
s Papio_anubis.CM001495.2                                183440741 79 + 183742232 tgatgag---------gatgag-------------------GAGT---A-ATT-GGAATTCT--CAT--AAATTGC-CTGTAG-GAA-TGC---A---AG---atggtataacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             4434 79 +     20448 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ctgtag-gaa-tgc---a---ag---atggtataacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20561240 79 +  20919399 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ctgtag-gaa-tgc---a---ag---atggtataacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   3178 79 +     41871 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ctgtag-gaa-tgc---a---ag---atggtataacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     6464 79 +     27711 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ctgtag-gaa-tgc---a---ag---atggtataacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  6543 79 +      9205 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ctgtag-gaa-tgc---a---ag---atggtataacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11258 82 -     78924 taatgag--cata-a-gg--ag-------------------a------g-agt-ggaagt----ctcgtaaattgc-tggaag-gag-tac---aaaatg---g---agtaaac--------a-ct-----tttga-aaa--ca--g------t--t-----t
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 4
s Perodicticus_ibeanus.k141_855320                            8196 71 +     13100 --------------------------------------------c---a-act-ggaacact--cac--aaattgc-tggtag-aag-aga---a---aa---atggtctgacc--------t-cttCAACTTTGt-gaa--ta--a------a--t-----t
i Perodicticus_ibeanus.k141_855320                       I 7 C 0
s Perodicticus_potto.k141_1092580                             6574 71 +     25941 --------------------------------------------c---a-act-ggaacact--cac--aaattgc-tggcag-aag-aga---a---aa---atggtctgacc--------t-cttCAACTTTGt-gaa--ta--a------a--t-----t
i Perodicticus_potto.k141_1092580                        I 7 C 0
s Piliocolobus_badius.k141_1234363                           41209 79 +     62158 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ttgtag-gaa-tgc---a---ag---atggtataacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        35939 79 +     89929 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ttgtag-gaa-tgc---a---ag---atggtacaacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            37355 79 +     51399 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ttgtag-gaa-tgc---a---ag---atggtacaacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14293593 79 -  14605196 tgatgag---------gatgag-------------------GAGT---A-ATT-GGAATTCT--CAT--AAATTGC-TTGTAG-GAA-TGC---A---ag---atggtacaacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189128672 81 + 189387572 tgatgag---------gatgag-------------------GAAT---A-ACT-GGAATTCT--CAT--AAATTGC-TTGTAG-GAA-TGC---A---AG---Atggtataacc--------a-ct-----ttgga-a-----acag------t--t-----t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9568280 81 +   9816681 tgatgag---------gatgag-------------------gaat---a-act-ggaattct--cat--aaattgc-ttgtag-gaa-tgc---a---ag---atggtataacc--------a-ct-----ttgga-a-----acag------t--t-----t
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               70866 79 -     81375 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ttgtag-gaa-tgc---a---ag---atggtgtaacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              2686 79 +     19060 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ttgtag-gaa-tgc---a---ag---atggtgtaacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 11292 67 -     22811 ------------------------------------------------a-acc-agacgc----ctcacgaactgc-tggtgg-gga-tgt---gaaatg---c---tatgacc--------a-ct-----ttgga-aaaaaga--g------c--t-----t
i Procavia_capensis.ProCapCap_scaffold_85530             I 17 I 4
s Prolemur_simus.MPIZ01000396.1                            2594943 82 -   4620579 tgatgag---------gatgag-------------------gagc---a-act-agaactct--cat--atattgc-tggtag-gaG-TTT---A---AA---ATGGTATGACC--------T-CTT-----TTCA-A--AATA--G------T--T-----T
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     988934 82 +   2598838 tgatgag---------gatgag-------------------gagc---a-act-agaactct--taT--AAATTGC-TGGTGG-GAG-TTT---A---AA---ATGGTATGACA--------C-CTT-----TTCA-A--AATA--G------T--C-----T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          27244 82 +     38485 tgatgag---------gatgag-------------------gagc---a-act-agaactct--tat--aaattgc-tggtgg-gag-ttt---a---aa---atggtatgaca--------c-ct----t-ttca-aaa--ta--g------t--c-----t
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             3404 82 +      4256 tgatgag---------gatgag-------------------gagc---a-act-agaactct--tat--aaattgc-tggtgg-gag-ttt---a---aa---atggtatgaca--------c-ct----t-ttca-aaa--ta--g------t--t-----t
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          24757 82 +     35766 tgatgag---------gatgag-------------------gagc---a-act-agaactct--tat--aaattgc-tggtgg-gag-ttt---a---aa---atggtatgaca--------c-ct----t-ttca-aaa--ta--g------t--t-----t
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           2940 82 -     24134 tgatgag---------gatgag-------------------gagc---a-act-agaactct--tat--aaattgc-tggtgg-gag-ttt---a---aa---atggtatgaca--------c-ct----t-ttca-aaa--ta--g------t--t-----t
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        26761 82 -     67325 tgatgag---------gatgag-------------------gagc---a-act-agaactct--tat--aaattgc-tggtgg-gag-ttt---a---aa---atggtatgaca--------c-ct----t-ttca-aaa--ta--g------t--t-----t
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           2997 82 -      6182 tgatgag---------gatgag-------------------gagc---a-act-agaactct--tat--aaattgc-tggtgg-gag-ttt---a---aa---atggtatgaca--------c-ct----t-ttca-aaa--ta--g------t--c-----t
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            13309 80 -     21811 tgatgagaatg-a---gg--ag-------------------c------a-act-ggaaat----ctcataaattgc-tggtag-gag-tac--caaaata---g---tatgacc--------a-ct-----ttgga-aaa--ct--g----------------
i Pteronotus_parnellii.KE909381.1                        C 0 I 5
s Pteronura_brasiliensis.PteBra_flattened_line_31117         38847 79 +     42204 taatgagtatg-a---gg--aa-------------------t------g-act--gaaat----ctc--aaactgc-tgatag-ggg-tgc---aaaatg---g---tgtgacc--------a-ct-----tctga-aaa--ca--g------t--t-----t
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 4
s Pteropus_alecto.KB030862.1                              22975395 82 +  28871421 tgataaggacg-a---aa--ag-------------------c------a-act-gaaact----ctcataaattgc-tggtag-gag-tac---aaaata---g---tatgacc--------a-ct-----ttcga-aaa--ca--g------a--t-----g
i Pteropus_alecto.KB030862.1                             C 0 I 4
s Pteropus_vampyrus.KN525825.1                             1358484 82 +   4952924 tgataaggacg-a---ag--ag-------------------c------a-acc-gaaact----ctcataaattgc-tggtag-gag-cac---aaaata---g---tatgacc--------a-ct-----ttcga-aaa--ca--g------a--t-----g
i Pteropus_vampyrus.KN525825.1                           C 0 I 4
s Puma_concolor.QAVW01001104.1                            20272918 82 -  38429054 taatgag--c-ctaa-gg--ag-------------------t------g-agt-gcaagt----ctcataaactgc-tggaag-aag-tac---aaaatg---g---tgtaacc--------a-ct-----tttga-aaa--ca--g------t--t-----t
i Puma_concolor.QAVW01001104.1                           C 0 I 4
s Pygathrix_cinerea.k141_1153803                             12701 79 -     91421 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ttgtag-gaa-tgc---a---ag---atggtgtaacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7606827 79 +   7812017 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ttgtag-gaa-tgc---a---ag---atggtgtaacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             12675 79 -     72585 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ttgtag-gaa-tgc---a---ag---atggtgtaacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             4382 79 -     11128 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ttgtag-gaa-tgc---a---ag---atggtgtaacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91233737 79 - 195417433 tgatgag---------gatgag-------------------GAGT---A-ATT-GGAATTCT--CAT--AAATTGC-TTGTAG-GAA-TGC---A---AG---ATGGTGTAACC--------A-CT-----TTGGA-A-----A--G------T--T-----T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7669386 79 +   7961872 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ttgtag-gaa-tgc---a---ag---atggtgtaacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                86405 82 -     96226 tgataaggac--a-t-ag--ag-------------------c------a-act-ggaact----ctcgtaaactgc-tggtag-gag-taa---aaaata---g---tatgacc--------a-ct-----ttgga-aaa--ca--g------a--t-----g
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 4
s Saguinus_bicolor.k141_2619299                               5599 54 -      8359 tgctgag---------gatgag-------------------gagt---a-act-ggaattct--cat--aaattgc-ttgtag-gac-tgc---a---ag---------------------------------------------------------------
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            11907 49 -     13588 TGCTGAG---------GATGAG-------------------GAGT---A-ACT-GGAATTCT--CAT--AAATTGC-TTGTAG-GAC-T--------------------------------------------------------------------------
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              5545 54 -      6207 tgctgag---------gatgag-------------------gagt---a-act-ggaattct--cat--aaattgc-ttgtag-gac-tgc---a---ag---------------------------------------------------------------
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               11272 54 +     13640 tgctgag---------gatgag-------------------gagt---a-act-ggaattct--cat--aaattgc-ttgtag-gac-tgc---a---ag---------------------------------------------------------------
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               6135 54 +      8564 tgctgag---------gatgag-------------------gagt---a-act-ggaattct--cat--aaattgc-ttgtag-gat-tgc---a---ag---------------------------------------------------------------
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209466413 54 + 209938924 tgctgag---------gatgag-------------------gagt---a-act-ggaattct--cat--aaattgc-ttgtag-gac-tgc---a---ag---------------------------------------------------------------
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 5623 54 -      9399 tgctgag---------gatgag-------------------gagt---a-act-ggaattct--cat--aaattgc-ttgtag-gac-tgc---a---ag---------------------------------------------------------------
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 2772 49 +      3421 TGCTGAG---------GATGAG-------------------GAGT---A-ACT-GGAATTCT--CAT--AAATTGC-TTGTAG-GAC-T--------------------------------------------------------------------------
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119948949 54 - 121099817 TGCTGAG---------GATGAG-------------------AAGT---A-ACT-GGAATTCT--CAT--AAATTGC-TTGTAG-GAC-TGC---A---AG---------------------------------------------------------------
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       21403 54 +     46362 tgctgag---------gatgag-------------------aagt---a-act-ggaattct--cat--aaattgc-ttgtag-gac-tgc---a---ag---------------------------------------------------------------
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               21498 54 +     45824 tgctgag---------gatgag-------------------aagt---a-act-ggaattct--cat--aaattgc-ttgtag-gac-tgc---a---ag---------------------------------------------------------------
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             38126 54 -     64574 tgctgag---------gatgag-------------------aagt---a-act-ggaattct--cat--aaattgc-ttgtag-gac-tgc---a---ag---------------------------------------------------------------
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               1132 54 -     23631 tgctgag---------gatgag-------------------aagt---a-act-ggaattct--cat--aaattgc-ttgtag-gac-tgc---a---ag---------------------------------------------------------------
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 21391 54 -     61129 tgctgag---------gatgag-------------------aagt---a-act-ggaattct--cat--aaattgc-ttgtag-gac-tgc---a---ag---------------------------------------------------------------
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    152287 52 -    313613 tgatgagattg-a---gg--ag-------------------c------a-act-ggaatg----ctcataaattgc-caacag-gag-tgc---a--------------------------------------------------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 34
s Semnopithecus_entellus.k141_11662                          17209 79 -     19888 tgatgag---------gatgag-------------------gagt---a-act-ggaattct--cat--aaattgc-ttgtag-gaa-tgc---a---ag---atggtgtaacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      24412 79 +     39453 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ttgtag-gaa-tgc---a---ag---atggtgtaacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            4938 79 +     27826 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ttgtag-gaa-tgc---a---ag---atggtgtaacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             4458 79 -     19483 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ttgtag-gaa-tgc---a---ag---atggtgtaacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      4520 79 +      7198 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ttgtag-gaa-tgc---a---ag---atggtgtaacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         12780 79 +     15514 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ttgtag-gaa-tgc---a---ag---atggtgtaacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               2415 80 +   1910179 tactgagaatg-a---gg--ag-------------------c------a-act-gatact----ctc--aaattgc-tgacag-gag-tgc---acaaga---g---tgtgacc--------t-ct-----ttaga-aaa--ca--g------c--t-----t
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13649577 32 -  18376816 TTCTTAG---GGTTG-GG--AG-------------------C------A-ACT-GTAATG----TT---AAA-------------------------------------------------------------------------------------------
i Sorex_araneus.JH798187.1                               C 0 I 2
s Spilogale_gracilis.SpiGra_flattened_line_13525             29361 77 +     97271 tgatgagcatg-a---tg--ag-------------------t------g-att--gaagt----ctc--aaactgc-tggtaa-gag-tgc---aaaatg---g---tgtgacc--------a-ct-----tttga-aaa--ca--g------t---------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 5
s Suricata_suricatta.SurSur_flattened_line_6629              16941 81 -    196729 taaggagca-tca---gg--aa-------------------t------g-agc-caaagt----ctcataaactgc--ggaag-gag-tac---aaaatg---g---tataatc--------a-ct-----tttga-aaa--ca--g------t--t-----t
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 4
s Sus_scrofa.JH118708.1                                      34170 50 -     47482 ---------------------------------------------------------------------aaattgc-tgacag-gag-tac---aaaacg---t---tatgacc--------a-ct-----ttaga-aaa--ca--g------t--t-----t
i Sus_scrofa.JH118708.1                                  I 28 I 4
s Symphalangus_syndactylus.tarseq_199                      1090990 81 -   1523678 tgatgag---------gatgag-------------------gagt---a-act-ggaattct--cat--aaattgc-ttgtgg-gaa-tgc---a---ag---atggtataacc--------a-ct-----ttgga-a-----acag------t--t-----t
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 9245 83 +     41958 tgataaggatg-a---gg--ag-------------------c------a-act-ggaact----ctcatacattgc-tgatag-gagggaa---aaaata---g---tatgacc--------a-ct-----ttgga-aaa--ca--g------c--t-----g
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 4
s Tamandua_tetradactyla.TamTet_scaffold_1782                 70759 52 +    116680 tgatgaggatg---t-gg--ag-------------------a------a-acc-cgaatt----cttataaattgc-tgatgg-gag-ggc---a--------------------------------------------------------------------
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 6 I 22
s Tapirus_indicus.TapInd_scaffold_9301                      117371 82 -    156842 tgatgagattg-a---gc--aa-------------------c------a-att-tgaact----ctcataaattgc-tggtag-gag-tac---gaattg---g---tgtgacc--------a-ct-----ttgga-aaa--ca--g------t--t-----t
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 4
s Tapirus_terrestris.TapTer_scaffold_755                    385824 82 +    539355 tgatgagattg-a---gg--aa-------------------c------a-tct-tgagct----ctcataaattgc-tggtag-gag-tac---aaattg---g---tgtgacc--------a-ct-----ttgga-aaa--ca--g------t--t-----t
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 4
s Tarsius_lariang.k141_2201908                               24307 46 +     70052 tgatgaa---------gatgaa-------------------gaat---a-act-gaaactct--cct--atattgc-tgatgg-a------------------------------------------------------------------------------
i Tarsius_lariang.k141_2201908                           C 0 I 31
s Tarsius_wallacei.k141_2029956                               3647 46 +      4644 tgatgaa---------gatgaa-------------------gaat---a-act-gaaactct--cct--atattgc-tgatgg-a------------------------------------------------------------------------------
i Tarsius_wallacei.k141_2029956                          C 0 I 31
s Theropithecus_gelada.CM009954.1                        186426106 79 + 186847797 TGATGTA---------GATGAG-------------------GAGT---A-ATT-GGAATTCT--CAT--AAATTGC-CTGTAG-GAA-TGC---A---AG---atggtataacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   3324 50 +      8208 tg-atgg---gcggt-gg--ag-------------------c------acaga-agga------ctcctaaactgc-tggtgg-gaa-ggc---a--------------------------------------------------------------------
i Tolypeutes_matacus.TolMat_scaffold_228639              I 6 I 33
s Tonatia_saurophila.TonSau_scaffold_294                     79560 75 +    610378 ------gga-tc-g--gg--ag-------------------c------a-cct-ggaatt----ctcctaagctgc-tggcaa-gag-aac--caaaata---g---tatgacc--------a-ct-----ttgga-aaa--ca--g------c---------
i Tonatia_saurophila.TonSau_scaffold_294                 I 7 I 5
s Trachypithecus_auratus.k141_722599                          8511 79 -     20410 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ttgtag-gaa-tgc---a---ag---atggtgtaacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    12705 79 +     15221 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ttgtag-gaa-tgc---a---ag---atggtgtaacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        8612 79 +     19930 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ttgtag-gaa-tgc---a---ag---atggtgtaacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       5041 79 -     19997 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ttgtag-gaa-tgc---a---ag---atggtgtaacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            45161 79 -     60166 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ttgtag-gaa-tgc---a---ag---atggtgtaacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        12634 79 -     27529 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ttgtag-gaa-tgc---a---ag---atggtgtaacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     12575 79 -     18194 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ttgtag-gaa-tgc---a---ag---atggtgtaacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           6308 79 -     21137 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ttgtag-gaa-tgc---a---ag---atggtgtaacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    5011 79 -     10723 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ttgtag-gaa-tgc---a---ag---atggtgtaacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         4163 79 +      9834 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ttgtag-gaa-tgc---a---ag---atggtgtaacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        22479 79 +     32220 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ttgtag-gaa-tgc---a---ag---atggtgtaacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5936578 79 +   6242583 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ttgtag-gaa-tgc---a---ag---atggtgtaacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        5826 79 +     20839 tgatgag---------gatgag-------------------gagt---a-att-ggaattct--cat--aaattgc-ttgtag-gaa-tgc---a---ag---atggtgtaacc--------a-ct-----ttgga-a-----a--g------t--t-----t
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2153336 80 +   4065304 tattgag---------aa--ag-------------------g---acca-gtg-ggaactct--aat--gagtggc-tggtag-tag-tgtgaga---tg---g---tatgacc--------a-cg-----tttga-aaa--ca--g------t--t-----t
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     6954 80 -     10553 tattgag---------aa--ag-------------------g---acca-gtg-ggaactct--aac--gagttgc-tcgtag-tag-tgtgaga---tg---g---tatgacc--------a-cg-----tctga-aaa--ca--g------t--g-----t
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   52488 52 -     77625 tgaggagaatg-a---gg--ag-------------------c------a-act-ggaatg----ctcataaattgc-tgacag-aag-tat---a--------------------------------------------------------------------
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 11
s Ursus_maritimus.KK499267.1                               4849048 78 -   5085361 tagtaag--c--atg-----ag-------------------t------g-acc--aaagt----ctcataaactgc-tggtgg-gag-tgc---aacatg---g---tgtggcc--------a-ct-----tttca-aaa--ca--g------t--t-----t
i Ursus_maritimus.KK499267.1                             I 6 I 4
s Varecia_rubra.k141_590885                                   9626 82 +     50397 tgatgag---------gatgag-------------------gagc---a-act-agaactct--cat--aaattga-tggtag-gag-ttt---a---aa---atggtatgacc--------t-ct----t-ttca-aaa--ta--g------t--t-----t
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              9680 82 +     24756 tgatgag---------gatgag-------------------gagc---a-act-agaactct--cat--aaattga-tggtag-gag-ttt---a---aa---atggtatgacc--------t-ct----t-ttca-aaa--ta--g------t--t-----t
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5370536 50 -   5488506 ---------------------------------------------------------------------aaactcc-tggtag-ggg-tac---aaaatg---c---tatgacc--------t-ct-----ttgca-aaa--ca--g------t--t-----t
i Vicugna_pacos.KN270157.1                               I 28 I 4
s Vulpes_lagopus.VulLag_flattened_line_30954                  9543 79 -     43706 taataag--c--a-t--g--ag-------------------t------g-act-agaagt----ctcataaaccgc-tggtag-gag-tgc---aaaatg---g---tgtgacc--------a-ct-----tttga-gaa--ca--g------t--t-----t
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 4
s Zalophus_californianus.ZalCal_flattened_line_17732          3773 81 +     86975 taatgagcatg-a---gg--ag-------------------t------g-act--gaagt----ctcataaactgc-tggtag-gag-tgc---aaaatg---g---tgtaacc--------a-ct-----tttga-aaa--ca--g------t--t-----t
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 4
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Chiropotes_albinasus.k141_2813271                           8451 841 +     11226 I
e Cebus_unicolor.k141_219506                                 14903  0 -     16904 I
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Mus_pahari.LT608297.1                                   31352818  0 -  89631738 C
e Mus_spretus.CM004101.1                                  90750234  0 - 130317789 C
e Mus_musculus.chr8                                       87648156  0 - 129401213 C
e Mus_caroli.LT608237.1                                   84359172  0 - 120012414 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Xerus_inauris.XerIna_scaffold_48378                        22715  0 -     24430 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Spermophilus_dauricus.KZ294078.1                         1951468 299 -   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11304  0 -     12148 C
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rattus_norvegicus.chr16                                 53568239  0 +  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Psammomys_obesus.NESX01036370.1                             8401  0 -     21651 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18191985  0 -  18517816 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7577 1418 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    77382  0 +    102263 C
e Ondatra_zibethicus.OndZib_scaffold_46174                   22267 24 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11258701  7 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12180532  2 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 30759  0 +    140813 C
e Marmota_marmota.CZRN01000018.1                          33100580 298 -  40650429 I
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Ictidomys_tridecemlineatus.JH393364.1                    7518272 302 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Ellobius_talpinus.LOJH01109367.1                            3704  7 -      6299 I
e Ellobius_lutescens.LOEQ01008920.1                          17650  7 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089466 1162 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            62283 174 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    835315  0 +   1526836 C
e Cricetulus_griseus.LT883664.1                           11665468  2 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 48141  0 +     63868 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    136243  0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      10117 439 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     72139 576 -     89534 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     68454  0 +     87051 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       4372 10 +     62944 gtc-agttt-----ct
s Acinonyx_jubatus.LLWD01001279.1                           826006  6 -   1699592 g-----ttt-----ct
i Acinonyx_jubatus.LLWD01001279.1                        I 4 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9509264  6 -  29979442 g-----ttt-----tt
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 4 C 0
s Ailurus_fulgens.LNAC01001112.1                             78051  6 -    347723 g-----ttt-----ct
i Ailurus_fulgens.LNAC01001112.1                         I 4 C 0
s Allenopithecus_nigroviridis.k141_3361533                   12288 10 -     52922 gtc-agttt-----ct
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         12230 10 -     28001 gtc-aattt-----ct
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          2676 10 -     18505 gtc-aattt-----ct
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           3525 10 -     12518 gtc-aattt-----ct
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183779  6 +    412891 g-----ttt-----ct
i Anoura_caudifer.AnoCau_scaffold_1412                   I 4 C 0
s Arctocebus_calabarensis.k141_2318572                        9627 10 +     14667 gtg-ataca-----tt
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3191  6 +     43469 g-----ttt-----ct
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 4 C 0
s Avahi_laniger.k141_765380                                  51962 10 -     92717 gtc-aatgt-----ct
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              52591 10 +     85213 gtc-aatgt-----ct
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Camelus_bactrianus.KN276810.1                           10001103  6 -  17673402 g-----ttt-----ct
i Camelus_bactrianus.KN276810.1                          I 4 C 0
s Camelus_dromedarius.KN272107.1                           2333561  6 -   7040546 g-----ttt-----ct
i Camelus_dromedarius.KN272107.1                         I 4 C 0
s Camelus_ferus.KB017975.1                                  401843  6 -   1652518 g-----ttt-----ct
i Camelus_ferus.KB017975.1                               I 4 C 0
s CanFam4.chr16                                           17798010  6 -  60362399 g-----ttt-----ct
i CanFam4.chr16                                          I 4 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184067  6 -    185531 g-----ttt-----ct
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 4 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9033453  6 -   9314153 g-----ttt-----ct
i Canis_lupus_dingo.QKWQ01000480.1                       I 4 C 0
s Canis_lupus_familiaris.chr16                            17957718  6 -  59632846 g-----ttt-----ct
i Canis_lupus_familiaris.chr16                           I 4 C 0
s Canis_lupus_orion.HG994398.1                            18499056  6 +  63665305 g-----ttt-----ct
i Canis_lupus_orion.HG994398.1                           I 4 I 174
s Carlito_syrichta.NW_007259797.1                           154262  6 -    496798 gt-----tt-----tt
i Carlito_syrichta.NW_007259797.1                        I 31 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                3553  6 -     11696 g-----ttt-----ct
i Carollia_perspicillata.CarPer_scaffold_92756           I 4 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     91706  6 +    217609 c-----ctt-----ct
i Catagonus_wagneri.CatWag_scaffold_2839                 I 4 C 0
s Cephalopachus_bancanus.k141_1423433                         3773  6 +     31688 gt-----tt-----tt
i Cephalopachus_bancanus.k141_1423433                    I 31 C 0
s Ceratotherium_simum.JH767749.1                          12230134  6 +  27778364 g-----ttt-----ct
i Ceratotherium_simum.JH767749.1                         I 4 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1161  6 -     25243 g-----ttt-----ct
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 4 C 0
s Cercocebus_atys.KQ010504.1                               4473247 10 +   4669795 gtc-agttt-----ct
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        11794 10 -     19203 gtc-agttt-----ct
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           6216 10 +      8260 gtc-agttt-----ct
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           6443 10 +     27781 gtc-agttt-----ct
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         6598 10 -     20310 gtc-agttt-----ct
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           9577 10 +     29689 gtc-agttt-----ct
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            4008 10 +      9989 gtc-agttt-----ct
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          12256 10 -     27936 gtc-agttt-----ct
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            1132 10 -     17152 gtc-agttt-----ct
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38814660 10 +  39242232 gtc-agttt-----ct
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21220361 10 -  21565898 gtc-agttt-----ct
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       37480 10 -     53127 gtc-agttt-----ct
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        4740 10 +      7159 gtc-agttt-----ct
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       12283 10 -     27947 gtc-agttt-----ct
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         12256 10 +     17596 gtc-agttt-----ct
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          1479 10 +     26000 gtc-agttt-----ct
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            6167  6 -      6351 C-----TTT-----CC
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       I 40 I 18
s Cheirogaleus_major.k141_333249                             19378 10 -     52598 gtc-aatgt-----ct
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           14723 10 +     57038 gtc-aatgt-----ct
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chlorocebus_aethiops.ctg25                              18426227 10 -  18827391 gtc-agttt-----ct
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       12665 10 -     50209 gtc-agttt-----ct
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135419665 10 + 135778131 GTC-AGTTT-----CT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 16556  6 +     19366 g-----ttt-----tc
i Choloepus_didactylus.ChoDid_scaffold_45914             I 22 C 0
s Choloepus_hoffmanni.KN194906.1                            171655  6 +    839153 g-----ttt-----tc
i Choloepus_hoffmanni.KN194906.1                         I 22 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_2561901               208  6 -       464 g-----ttt-----ct
i Chrysochloris_asiatica.ChrAsi_scaffold_2561901         I 4 I 52
s Colobus_angolensis.KN981557.1                            1908181 10 +   2368649 gtc-agttt-----ct
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199947857 10 + 200372422 gtc-agttt-----ct
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              34719 10 +     84244 gtc-agttt-----ct
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17547304  6 -  53390261 a-----att-----cc
i Condylura_cristata.JH655891.1                          I 30 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          12692  6 -     20389 t-----ttt-----ct
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 4 I 21
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27181  6 -     87169 g-----ttt-----ct
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 4 C 0
s Daubentonia_madagascariensis.ctg71                      12535585 10 -  12879189 gtc-agtgt-----ct
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8628583  6 +  20541912 g-----ttt-----ct
i Desmodus_rotundus.KZ672289.1                           I 4 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  671985  6 +   1390856 g-----ttt-----ct
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 4 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    4742  6 +    198055 g-----ttt-----ct
i Diceros_bicornis.DicBicMic_scaffold_5955               I 4 C 0
s Echinops_telfairi.JH980293.1                            48778189  6 + 111700974 g-----ttt-----ct
i Echinops_telfairi.JH980293.1                           I 8 I 2
s Eidolon_helvum.KE759718.1                                   9218  6 +     11740 t-----ttt-----ct
i Eidolon_helvum.KE759718.1                              I 4 C 0
s Enhydra_lutris.KZ291758.1                               16328020  6 -  41312741 g-----ttt-----ct
i Enhydra_lutris.KZ291758.1                              I 4 C 0
s Equus_asinus.JREZ01000139.1                              1282046  6 +   4378816 g-----ttt-----ct
i Equus_asinus.JREZ01000139.1                            I 4 C 0
s Equus_caballus.CM000403.2                               18529867  6 -  39960074 g-----ttt-----ct
i Equus_caballus.CM000403.2                              I 4 C 0
s Equus_przewalskii.KK951119.1                               31882  6 +    498745 g-----ttt-----ct
i Equus_przewalskii.KK951119.1                           I 4 C 0
s Erythrocebus_patas.Contig38                             21202855 10 -  21539334 gtc-agttt-----ct
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              12070 10 -     14127 gtc-aatgt-----ct
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                4768 10 -     16928 gtc-aatgt-----ct
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              13805 10 -     25546 gtc-aatgt-----ct
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            10995 10 +     26330 gtc-aatgt-----ct
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 12234 10 +     23973 gtc-aatgt-----ct
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                10995 10 +     75513 gtc-aatgt-----ct
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  8937 10 +     97555 gtc-aatgt-----ct
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            11873 10 +     26496 gtc-aatgt-----ct
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  2470 10 -     17153 gtc-aatgt-----ct
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              12046 10 +    111500 gtc-aatgt-----ct
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20235875  6 + 206538554 g-----ttt-----ct
i Felis_catus.CM001381.2                                 I 4 C 0
s Felis_catus_fca126.CM031415.1                           20194718  6 + 205367284 g-----ttt-----ct
i Felis_catus_fca126.CM031415.1                          I 4 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  8232  6 -     36744 g-----ttt-----ct
i Felis_nigripes.FelNig_flattened_line_20823             I 4 C 0
s Galago_moholi.ctg2040                                     424594 10 -    453645 gtg-ataca-----ct
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             2301 10 +     11339 gtg-ataca-----ct
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1959596                            6109 10 +      6795 gtg-ataca-----gt
i Galagoides_demidoff.k141_1959596                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_197845               2333 10 -      3123 gtc-cgttt-----ct
i Galeopterus_variegatus.GalVar_scaffold_197845          C 0 I 100
s Gorilla_beringei.k141_3596273                              13625 10 -     32273 gtc-agttt-----ct
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186335773 10 + 186649187 gtc-agttt-----ct
i Gorilla_gorilla.LT578341.1                             C 0 I 82
s Hapalemur_alaotrensis.k141_170648                           5124 10 -     19426 gtc-aatgt-----ct
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             10273 10 -     15286 gtc-aatgt-----ct
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             11912 10 +     18253 gtc-aatgt-----ct
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         12013 10 -     41752 gtc-aatgt-----ct
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         11851 10 -     16460 gtc-aatgt-----ct
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               241026  6 +    327341 g-----ttt-----ct
i Helogale_parvula.HelPar_flattened_line_2585            I 4 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_403422                 370  5 -       893 g-----ctt-----c-
i Heterohyrax_brucei.HetBruBak_scaffold_403422           I 4 I 2
s Hipposideros_armiger.JXIK01000431.1                       110489  6 +   1711038 c-----ttt-----at
i Hipposideros_armiger.JXIK01000431.1                    I 4 I 21
s Hipposideros_galeritus.HipGal_scaffold_29171               41916  6 +     43066 c-----ttt-----at
i Hipposideros_galeritus.HipGal_scaffold_29171           I 8 I 80
s Hoolock_leuconedys.ctg274                                    432436 10 +    630532 gtc-agttt-----ct
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  43158  6 +     55795 g-----ttt-----ct
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 4 C 0
s Hylobates_agilis.k141_232023                                 202 10 -     12752 gtc-agttt-----ct
i Hylobates_agilis.k141_232023                           N 0 C 0
s Hylobates_klossii.k141_240831                                246 10 +     14092 gtc-agttt-----ct
i Hylobates_klossii.k141_240831                          N 0 C 0
s Hylobates_pileatus_b.LG02                                     189541029 10 - 191637585 gtc-agttt-----ct
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3333923 10 -  11177569 gtc-agttt-----ct
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_3655594                                   20818 10 +     31101 gtc-aatgt-----ct
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15522359 10 -  30322482 gtc-aatgt-----ct
i Lemur_catta.scaffold_24                                I 27 C 0
s Lepilemur_ankaranensis.k141_596936                          9256 10 -     23766 gtc-aaggt-----ct
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             27321 10 +     45836 gtc-aaggt-----ct
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_667017                          1859 10 -      2151 gtc-aaggt-----ct
i Lepilemur_ruficaudatus.k141_667017                     I 548 I 80
s Lepilemur_septentrionalis.k141_185316                      25258 10 +     54090 gtc-aaggt-----ct
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.APMU01168965.1                      1026  6 -      1094 g-----ttt-----ct
i Leptonychotes_weddellii.APMU01168965.1                 I 228 n 228
s Lepus_americanus.LepAme_scaffold_107385                     4234  6 -     14121 g-----ttt-----ct
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1434792 10 +   1826925 gtc-agttt-----ct
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            4053 10 +     11245 gtg-ataca-----tt
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1002892 10 +   6120653 gtg-ataca-----tt
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4215692  6 -  43346337 g-----tct-----ct
i Loxodonta_africana.GL010049.1                          I 4 I 2
s Lycaon_pictus.CM007581.1                                17953958  6 -  59628241 g-----ttt-----ct
i Lycaon_pictus.CM007581.1                               I 4 C 0
s Macaca_arctoides.k141_2326796                               4605 10 +     40492 gtc-agttt-----ct
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59673867 10 +  60120075 gtc-agttt-----ct
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 10361 10 -     26193 gtc-agttt-----ct
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            78165 10 -    114318 gtc-agttt-----ct
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  3864 10 -     23192 gtc-agttt-----ct
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                13324 10 -     29190 gtc-agttt-----ct
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  21892 10 +     37952 gtc-agttt-----ct
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186836980 10 + 187317192 gtc-agttt-----ct
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25455543 10 -  25927173 gtc-agttt-----ct
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  77741 10 +     89720 gtc-agttt-----ct
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 4738 10 +     20474 gtc-agttt-----ct
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   4540 10 -     14993 gtc-agttt-----ct
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  327410 10 -    668171 gtc-agttt-----ct
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 2850 10 -     24072 gtc-agttt-----ct
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               23479 10 -     45290 gtc-agttt-----ct
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 89293  6 +     94391 t-----ttt-----ct
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 4 C 0
s Mandrillus_leucophaeus.scaffold280                      23935066 10 -  24302211 gtc-agttt-----ct
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               349199 10 +    752769 gtc-agttt-----ct
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              18151  6 +    737560 a-----ttt-----ct
i Manis_javanica.JSZB01003497.1                          I 4 C 0
s Manis_pentadactyla.KN006162.1                              49535  6 -    317179 a-----ttt-----ct
i Manis_pentadactyla.KN006162.1                          I 4 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         9030  6 -    207569 t-----ttt-----ct
i Megaderma_lyra.MegLyr_scaffold_4542                    I 4 I 4285
s Mellivora_capensis.MelCap_flattened_line_69365              8738  6 +     13704 a-----ttt-----ct
i Mellivora_capensis.MelCap_flattened_line_69365         I 4 C 0
s Microcebus_murinus.CM007674.1                           18289762 10 -  93316391 gtc-aatgT-----CT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    18037  6 -    145209 G-----TTT-----CT
i Microgale_talazaci.MicTal_scaffold_6613                I 15 I 2
s Micronycteris_hirsuta.MicHir_scaffold_52381                14097  6 -     19307 g-----ttt-----ct
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 4 C 0
s Miopithecus_ogouensis.k141_534055                           6786 10 -     28506 gtc-agttt-----ct
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         4425  6 -      8324 g-----ttt-----ct
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 213 C 0
s Mirza_zaza.k141_952172                                      7335 10 -     37649 gtc-aatgt-----ct
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 139978  6 -    366855 g-----ttt-----ct
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 27 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   34133  6 +     37127 g-----ttt-----ct
i Mungos_mungo.MunMun_flattened_line_23663               I 4 C 0
s Mustela_putorius.JH418006.1                               299913  6 -  14710649 g-----ttt-----ct
i Mustela_putorius.JH418006.1                            I 4 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187479  6 +    196477 g-----ttt-----cc
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 22 C 0
s Nasalis_larvatus.k141_413338                               12782 10 +     21681 gtc-agttt-----at
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9148216  6 -   9404916 g-----ttt-----ct
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 4 C 0
s Nycticebus_bengalensis.LG01                            102577813 10 - 196305487 gcg-ataca-----tt
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             5499 10 +      8486 gcg-ataca-----tt
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105748240 10 + 199412804 ggg-ataca-----tt
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1361295  6 +   3988456 g-----ttt-----ct
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              505364  6 -   2017862 g-----ttt-----ct
i Odobenus_rosmarus.KB229312.1                           I 4 C 0
s Oryctolagus_cuniculus.CM000791.1                        67145079  6 + 174332312 g-----ttt-----ct
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       461180  6 -    559221 g-----ttt-----ct
i Otocyon_megalotis.JAEUCK010005147.1                    I 4 C 0
s Otolemur_crassicaudatus.k141_222918                         2136 10 +      8798 gtg-ataca-----gt
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             694300 10 -   1103335 gtg-ataca-----gT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    41722 10 +     80009 gtc-agttt-----ct
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189140634 10 + 189151597 gtc-agttt-----ct
i Pan_troglodytes.CM009242.2                             I 81 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  149885  6 +    230217 g-----ttt-----ct
i Panthera_onca.PanOnc_flattened_line_3271               I 4 C 0
s Panthera_pardus.KV860321.1                                263093  6 +  18783137 g-----ttt-----ct
i Panthera_pardus.KV860321.1                             I 4 C 0
s Panthera_tigris.KE722367.1                               4719728  6 -   8748460 g-----ttt-----ct
i Panthera_tigris.KE722367.1                             I 4 C 0
s Papio_anubis.CM001495.2                                183440820 10 + 183742232 gtc-agttt-----ct
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             4513 10 +     20448 gtc-agttt-----ct
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20561319 10 +  20919399 gtc-agttt-----ct
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   3257 10 +     41871 gtc-agttt-----ct
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     6543 10 +     27711 gtc-agttt-----ct
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  6622 10 +      9205 gtc-agttt-----ct
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11344  8 -     78924 g-----ttt-tt--tt
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 4 C 0
s Perodicticus_ibeanus.k141_855320                            8267 10 +     13100 gtg-ataca-----tt
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             6645 10 +     25941 gtg-atata-----tt
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Piliocolobus_badius.k141_1234363                           41288 10 +     62158 gtc-agttt-----ct
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        36018 10 +     89929 gtc-agttt-----ct
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            37434 10 +     51399 gtc-agttt-----ct
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14293672 10 -  14605196 gtc-agttt-----ct
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189128753 10 + 189387572 gtc-agttt-----ct
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9568361 10 +   9816681 gtc-agttt-----ct
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               70945 15 -     81375 gtc-agtttattatat
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              2765 15 +     19060 gtc-agtttattatat
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 11363  5 -     22811 g-----ctt-----c-
i Procavia_capensis.ProCapCap_scaffold_85530             I 4 I 2
s Prolemur_simus.MPIZ01000396.1                            2595025 10 -   4620579 GTC-AATGT-----CT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     989016 10 +   2598838 GTC-AATGT-----CT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          27326 10 +     38485 gtc-aatgt-----ct
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             3486 10 +      4256 gtc-aatgt-----ct
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          24839 10 +     35766 gtc-aatgt-----ct
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           3022 10 -     24134 gtc-aatgt-----ct
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        26843 10 -     67325 atc-aatgt-----ct
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           3079 10 -      6182 gtc-aatgt-----ct
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            13394  6 -     21811 g-----ttt-----ct
i Pteronotus_parnellii.KE909381.1                        I 5 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         38930  6 +     42204 g-----ttt-----ct
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 4 C 0
s Pteropus_alecto.KB030862.1                              22975481  6 +  28871421 t-----ttt-----ct
i Pteropus_alecto.KB030862.1                             I 4 C 0
s Pteropus_vampyrus.KN525825.1                             1358570  6 +   4952924 t-----ttt-----ct
i Pteropus_vampyrus.KN525825.1                           I 4 C 0
s Puma_concolor.QAVW01001104.1                            20273004  6 -  38429054 g-----ttt-----ct
i Puma_concolor.QAVW01001104.1                           I 4 C 0
s Pygathrix_cinerea.k141_1153803                             12780 10 -     91421 gtc-agttt-----at
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7606906 10 +   7812017 gtc-agttt-----at
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             12754 10 -     72585 gtc-agttt-----at
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             4461 10 -     11128 gtc-agttt-----at
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91233816 10 - 195417433 GTC-AGTTT-----AT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7669465 10 +   7961872 gtc-agttt-----at
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                86491  6 -     96226 t-----ttt-----ct
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 4 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    152373  6 -    313613 g-----ttt-----ct
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 34 C 0
s Semnopithecus_entellus.k141_11662                          17288 10 -     19888 gtc-agttt-----at
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      24491 10 +     39453 gtc-agttt-----at
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            5017 10 +     27826 gtc-agttt-----at
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             4537 10 -     19483 gtc-agttt-----at
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      4599 10 +      7198 gtc-agttt-----at
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         12859 10 +     15514 gtc-agttt-----at
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               2495  6 +   1910179 g-----ttt-----ct
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             29443  6 +     97271 a-----ttt-----ct
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 5 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              17026  6 -    196729 g-----ttt-----ct
i Suricata_suricatta.SurSur_flattened_line_6629          I 4 C 0
s Sus_scrofa.JH118708.1                                      34224  6 -     47482 a-----ctt-----ct
i Sus_scrofa.JH118708.1                                  I 4 C 0
s Symphalangus_syndactylus.tarseq_199                      1091071 10 -   1523678 gtc-agttt-----ct
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 9332  6 +     41958 g-----ttc-----ct
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 4 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 70833  6 +    116680 g-----ttt-----cc
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 22 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      117457  6 -    156842 g-----ttt-----ct
i Tapirus_indicus.TapInd_scaffold_9301                   I 4 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    385910  6 +    539355 g-----ttt-----ct
i Tapirus_terrestris.TapTer_scaffold_755                 I 4 C 0
s Tarsius_lariang.k141_2201908                               24384  6 +     70052 gt-----tt-----tt
i Tarsius_lariang.k141_2201908                           I 31 C 0
s Tarsius_wallacei.k141_2029956                               3724  6 +      4644 gt-----tt-----tt
i Tarsius_wallacei.k141_2029956                          I 31 C 0
s Theropithecus_gelada.CM009954.1                        186426185 10 + 186847797 gtc-agttt-----ct
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   3407  6 +      8208 a-----ttg-----cc
i Tolypeutes_matacus.TolMat_scaffold_228639              I 33 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     79640  6 +    610378 g-----ttc-----ct
i Tonatia_saurophila.TonSau_scaffold_294                 I 5 C 0
s Trachypithecus_auratus.k141_722599                          8590 10 -     20410 gtc-agttt-----at
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    12784 10 +     15221 gtc-agttt-----at
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        8691 10 +     19930 gtc-agttt-----at
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       5120 10 -     19997 gtc-agttt-----at
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            45240 10 -     60166 gtc-agttt-----at
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        12713 10 -     27529 gtc-agttt-----at
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     12654 10 -     18194 gtc-agttt-----at
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           6387 10 -     21137 gtc-agttt-----at
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    5090 10 -     10723 gtc-agttt-----at
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         4242 10 +      9834 gtc-agttt-----at
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        22558 10 +     32220 gac-agttt-----at
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5936657 10 +   6242583 gtc-agttt-----at
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        5905 10 +     20839 gtc-agttt-----at
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2153416 10 +   4065304 ctc-tgtct-----ct
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     7034 11 -     10553 ctcttgtct-----ct
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   52551  6 -     77625 c-----ttt-----ct
i Uropsilus_gracilis.UroGra_scaffold_12083               I 11 C 0
s Ursus_maritimus.KK499267.1                               4849130  6 -   5085361 g-----ttt-----ct
i Ursus_maritimus.KK499267.1                             I 4 C 0
s Varecia_rubra.k141_590885                                   9708 10 +     50397 gtc-gatgc-----ct
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              9762 10 +     24756 gtc-aatgc-----ct
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5370590  6 -   5488506 g-----ttt-----ct
i Vicugna_pacos.KN270157.1                               I 4 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  9626  6 -     43706 g-----ttt-----ct
i Vulpes_lagopus.VulLag_flattened_line_30954             I 4 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          3858  6 +     86975 g-----ttt-----ct
i Zalophus_californianus.ZalCal_flattened_line_17732     I 4 C 0
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Saimiri_ustus.k141_1484609                                 21445  0 -     61129 C
e Saimiri_sciureus.k141_2278166                               1186  0 -     23631 C
e Saimiri_oerstedii.k141_1487881                             38180  0 -     64574 C
e Saimiri_macrodon.k141_716185                               21552  0 +     45824 C
e Saimiri_cassiquiarensis.k141_2188234                       21457  0 +     46362 C
e Saimiri_boliviensis.NW_024100920.1                     119949003  0 - 121099817 C
e Saguinus_oedipus.k141_63850                                 2821  0 +      3421 C
e Saguinus_mystax.k141_374627                                 5677  0 -      9399 C
e Saguinus_midas.LG03                                    209466467  0 + 209938924 C
e Saguinus_labiatus.k141_285685                               6189  0 +      8564 C
e Saguinus_inustus.k141_699149                               11326  0 +     13640 C
e Saguinus_imperator.k141_717981                              5599  0 -      6207 C
e Saguinus_geoffroyi.k141_1413670                            11956  0 -     13588 C
e Saguinus_bicolor.k141_2619299                               5653  0 -      8359 C
e Mico_schneideri.k141_1950671                                      3531  0 -      7356 C
e Mico_humeralifer.k141_1976199                               2592  0 +     18990 C
e Mico_argentatus.k141_1239457                                3526  0 -      7380 C
e Leontopithecus_rosalia.k141_464620                         23441  0 +     66356 C
e Leontopithecus_chrysomelas.k141_1519602                    26744  0 +     38576 C
e Leontocebus_nigricollis.k141_4610752                        5271  0 +     35603 C
e Leontocebus_illigeri.k141_3350179                           2405  0 +      4941 C
e Leontocebus_fuscicollis.k141_1820339                        5344  0 +     64341 C
e Chiropotes_albinasus.k141_2813271                           8451 841 +     11226 I
e Cebus_unicolor.k141_219506                                 14903  0 -     16904 I
e Cebus_olivaceus.k141_1000828                                1640  0 -      2944 C
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Cebuella_pygmaea.k141_1309012                               3702  0 -      7577 C
e Cebuella_niveiventris.k141_1251222                          7604  0 -     11392 C
e Callithrix_kuhlii.k119_1164682                              9694  0 -     12001 C
e Callithrix_jacchus.pat_scaffold_3                       23588164  0 - 189096842 C
e Callithrix_geoffroyi.k119_512088                            2950  0 +      5267 C
e Callimico_goeldii.k141_1091182                             22480  0 +     31915 C
e Callibella_humilis.k141_1278103                             2980  0 -     10423 C
e Aotus_vociferans.k141_344750                               26360  0 -     47192 C
e Aotus_trivirgatus.k141_2152450                             13239  0 -     34685 C
e Aotus_nancymaae.KZ198451.1                               4295634  0 -   5030052 C
e Aotus_griseimembra.k141_2240599                            13237  0 -     34016 C
e Aotus_azarae.k141_3104676                                  13217  0 -     33861 C
e Alouatta_seniculus.k141_117119                             12594  0 +     50774 C
e Alouatta_puruensis.k141_1253230                             1374  0 -      3544 C
e Alouatta_palliata.k141_2135620                              1244  0 +     47717 C
e Alouatta_nigerrima.k141_3472759                            15857  0 -     18578 C
e Alouatta_macconnelli.k141_1406484                           1744  0 +      2906 C
e Alouatta_juara.k141_1509701                                22560  0 +     25266 C
e Alouatta_discolor.k141_743489                               1354  0 -     45847 C
e Alouatta_caraya.k141_1743867                                1219  0 +      3134 C
e Alouatta_belzebul.k141_3238538                              1094  0 -     27731 C
e Mus_pahari.LT608297.1                                   31352818  0 -  89631738 C
e Mus_spretus.CM004101.1                                  90750234  0 - 130317789 C
e Mus_musculus.chr8                                       87648156  0 - 129401213 C
e Mus_caroli.LT608237.1                                   84359172  0 - 120012414 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Xerus_inauris.XerIna_scaffold_48378                        22715  0 -     24430 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Spermophilus_dauricus.KZ294078.1                         1951468 299 -   3870691 I
e Sorex_araneus.JH798187.1                                13649609  2 -  18376816 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11304  0 -     12148 C
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rattus_norvegicus.chr16                                 53568239  0 +  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Psammomys_obesus.NESX01036370.1                             8401  0 -     21651 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18191985  0 -  18517816 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7577 1418 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    77382  0 +    102263 C
e Ondatra_zibethicus.OndZib_scaffold_46174                   22267 24 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11258701  7 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12180532  2 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 30759  0 +    140813 C
e Marmota_marmota.CZRN01000018.1                          33100580 298 -  40650429 I
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Ictidomys_tridecemlineatus.JH393364.1                    7518272 302 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Ellobius_talpinus.LOJH01109367.1                            3704  7 -      6299 I
e Ellobius_lutescens.LOEQ01008920.1                          17650  7 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089466 1162 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            62283 174 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    835315  0 +   1526836 C
e Crocidura_indochinensis.CroInd_scaffold_37019               1577  2 -     19598 I
e Cricetulus_griseus.LT883664.1                           11665468  2 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 48141  0 +     63868 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    136243  0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      10117 439 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     72139 576 -     89534 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     68454  0 +     87051 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       4382 82 +     62944 tatac-ggttt-aacgtatat-------t-----------------t------------cc-tgt-aag----ac-ttagcaatcaca-ctcctgg-at-agttgcccaag--agaaatgaa-aa-----ca-t--atgta
s Acinonyx_jubatus.LLWD01001279.1                           826012 81 -   1699592 tatca-agttt-aac-----atat--tgt-----------------t------------ac-cat-aaa----ac-tcagcaaccaca-ctcctg--tt-atttacccaac--agaaacgaa-aa-----ta-t--atata
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9509270 81 -  29979442 tatga-agttt-aaa-----atata--gt-----------------t------------ac-cat-aaa----ac-ccagcagtcaca-ctactg--gt-atttacccaag--agaaacgaa-aa-----ta-t--acgca
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             78057 81 -    347723 tataa-agttt-aac-----atgta--gg-----------------t------------ac-cat-aaa----ac-ccagcaatcaca-ctcctg--gt-atttaccgaag--agaaatgaa-aa-----ca-t--atgca
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   12298 82 -     52922 tctat-ggttt-aatgtatat-------t-----------------t------------cc-cgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         12240 82 -     28001 tctat-ggttt-aatgtatat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          2686 82 -     18505 tctat-ggttt-aatgtatat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           3535 82 -     12518 tctat-ggttt-aatgtatat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                              1094 83 -     27731 ---at-ggttt-aaaaaatat-------t-----------------t------------cc-cgc-aagacttac-ttagcaatcaca-ctagcgg-at-agttgcccgag--agaaatgaa-aa-----cg-t--gtgta
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                1219 83 +      3134 ---at-ggttt-aacaaatat-------t-----------------t------------cc-cgc-aagacttac-ttagcaatcaca-ctagcgg-at-agttgcccgag--agaaatgaa-aa-----cg-t--gtgta
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               1354 83 -     45847 ---at-ggttt-aaaaaatat-------t-----------------t------------cc-cgc-aagacttac-ttagcaatcaca-ctaccgg-at-agttgcccgag--agaaatgaa-aa-----cg-t--gtgta
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                22560 83 +     25266 ---at-ggttt-aacaaatat-------t-----------------t------------cc-cgc-aagacttac-ttagcaatcaca-ctaccgg-at-agttgcccgag--agaaatgaa-aa-----cg-t--gtgta
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           1744 83 +      2906 ---at-ggttt-aacaaatat-------t-----------------t------------cc-cgc-aagacttac-ttagcaatcaca-ctaccgg-at-agttgcccgag--agaaatgaa-aa-----cg-t--gtgta
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            15857 83 -     18578 ---at-ggttt-aacaaatat-------t-----------------t------------cc-cgc-aagacttac-ttagcaatcaca-ctaccgg-at-agttgcccgag--agaaatgaa-aa-----cg-t--gtgta
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              1244 83 +     47717 ---at-ggttt-aacaaatat-------t-----------------t------------cc-cgc-aagacttac-ttagcaatcaca-ctaccgg-at-agttgcccgag--agaaatgta-aa-----cg-t--gtgta
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             1374 83 -      3544 ---at-ggttt-aacaaatat-------t-----------------t------------cc-cgc-aagacttac-ttagcaatcaca-ctaccgg-at-agttgcccgag--agaaatgaa-aa-----cg-t--gtgta
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             12594 83 +     50774 ---at-ggttt-aacaaatat-------t-----------------t------------cc-cgc-aagacttac-ttagcaatcaca-ctaccgg-at-agttgcccgag--agaaatgaa-aa-----cg-t--gtgta
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183785 79 +    412891 tataa-agttt-agc-----ata----gt-----------------t------------ac-cat-aag----ac-ccaacaatcaca-ctcatg--gt-atttatccaag--agaactgaa-aa-----ca-t--atgta
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  13217 80 -     33861 ---at-ggttt-aacaaatat-------t-----------------t------------cc-cac-aag----ac-ttagcaatcaca-ctactgg-at-agttgcccgag--agaaatgag-aa-----tgtt--gtgta
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            13237 80 -     34016 ---at-ggttt-aacaaatat-------t-----------------t------------cc-cac-aag----ac-ttagcaatcaca-ctactgg-at-agttgcccgag--agaaatgag-aa-----cgtt--gtgta
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4295634 80 -   5030052 ---AT-ggttt-aacaaatat-------t-----------------t------------cc-caC-AAG----AC-TTAGCAATCACA-CTACTGG-AT-AGTTGCCCGAG--AGAAATGAG-AA-----TGTT--GTGTA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             13239 80 -     34685 ---at-ggttt-aacaaatat-------t-----------------t------------cc-cac-aag----ac-ttagcaatcaca-ctactgg-at-agttgcccgag--agaaatgag-aa-----cgtt--gtgta
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               26360 80 -     47192 ---at-ggttt-aacaaatat-------t-----------------t------------cc-cac-aag----ac-ttagcaatcaca-ctactgg-at-agttgcccgag--agaaatgag-aa-----cgtt--gtgta
i Aotus_vociferans.k141_344750                           C 0 C 0
s Arctocebus_calabarensis.k141_2318572                        9637  7 +     14667 catgt-ag-------------------------------------------------------------------------------------------------------------------------------------
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3197 79 +     43469 tataa-ggttt-agc-----ata----gt-----------------t------------ac-cat-aag----ac-ccaacaatcata-ctcatg--gt-atttatccaag--agaaatgaa-aa-----cg-t--atgta
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  51972 80 -     92717 tataa-agttt-aatgtgcag-------t-----------------t------------gc-cat-aag----ac---agcaatcaca-atcttag-gt-atttacccaag--agatatgaa-aa-----ca-t--atgaa
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              52601 80 +     85213 tataa-agttt-aatgtgcag-------t-----------------t------------gc-cat-aag----at---agcaatcaca-atcttag-gt-atttacccaag--agatatgaa-aa-----ca-t--atgaa
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             2980 79 -     10423 ---ac-ggttt-cacaaatat-------t-----------------t------------cc-cgc-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcctgac--agaaatgaa-aa-----tg-t--gtgtt
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             22480 79 +     31915 ---at-ggttt-aacaaatat-------t-----------------t------------cc-tgc-aag----ac-ttagcaatcaca-ctcctgg-at-agttgcccgag--agaaatgaa-aa-----tg-g--gtgtt
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            2950 79 +      5267 ---aa-ggttt-cacaaatat-------t-----------------t------------cc-cgc-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--agaaatgaa-aa-----tg-t--gtgtt
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23588164 79 - 189096842 ---aa-ggttt-cacaaatat-------t-----------------t------------cc-cgc-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--agaaatgaa-aa-----tg-t--gtgtt
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              9694 79 -     12001 ---aa-ggttt-cacaaatat-------t-----------------t------------cc-cgc-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--agaaatgaa-aa-----tg-t--gtgtt
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10001109 81 -  17673402 tgtga-agttt-aac-----atat--ggt-----------------t------------ac-cat-aag----at-ccagaaatcaca-ctccta--gt-atttaaccaag--agaaataaa-aa-----ca-t--atgca
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2333567 81 -   7040546 tgtga-agttt-aac-----atat--ggt-----------------t------------ac-cat-aag----at-ccagaaatcaca-ctccta--gt-atttaaccaag--agaaataaa-aa-----ca-t--atgca
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  401849 81 -   1652518 tgtga-agttt-aac-----atat--ggt-----------------t------------ac-cat-aag----at-ccagaaatcaca-ctccta--gt-atttaaccaag--agaaataaa-aa-----ca-t--atgca
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17798016 81 -  60362399 aataa-aggtt-aac-----atgta--gt-----------------t------------ac-cat-aaa----ac-ccagtaatcact-ctcctg--gt-atttgcccaag--agaaacgaa-aa-----ca-t--atgca
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184073 81 -    185531 aataa-aggtt-aac-----atgta--gt-----------------t------------ac-cat-aaa----ac-ccagtaatcact-ctcctg--gt-atttgcccaag--agaaacgaa-aa-----ca-t--atgca
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9033459 81 -   9314153 aataa-aggtt-aac-----atgta--gt-----------------t------------ac-cat-aaa----ac-ccagtaatcact-ctcctg--gt-atttgcccaag--agaaacgaa-aa-----ca-t--atgca
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17957724 81 -  59632846 aataa-aggtt-aac-----atgta--gt-----------------t------------ac-cat-aaa----ac-ccagtaatcact-ctcctg--gt-atttgcccaag--agaaacgaa-aa-----ca-t--atgca
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18499236 81 +  63665305 aataa-aggtt-aac-----atgta--gt-----------------t------------ac-cat-aaa----ac-ccagtaatcact-ctcctg--gt-atttgcccaag--agaaacgaa-aa-----ca-t--atgca
i Canis_lupus_orion.HG994398.1                           I 174 C 0
s Carlito_syrichta.NW_007259797.1                           154268 82 -    496798 tataa-agttt-ACTATATAG-------T-----------------T------------AC-CAT-AAG----TA-TTAGCAATCACA-CAtctgg-gt-atttacccaag--agaaatgaa-aa-----ca-c--aggtA
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                3559 79 -     11696 tataa-agttt-agc-----ata--c--t-----------------t------------ac-cat-aag----ac-ccaacaatcaca-ctcatg--gt-atttatccaag--agaactgaa-aa-----ca-t--atgta
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     91712 81 +    217609 tgtgt-agttt-aat-----ata--caat-----------------t------------ac-cat-aag----ac-ctaggaattgca-caccta--gt-aggtgcccaag--agaaatgaa-aa-----ca-t--acaga
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          7604 79 -     11392 ---ac-ggttt-cacaaatat-------t-----------------t------------cc-cgc-aag----ac-ttagtagtcaca-ctcctgg-at-agttgcccgag--agaaatgaa-aa-----tg-t--gtgtt
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               3702 79 -      7577 ---ac-ggttt-cacaaatat-------t-----------------t------------cc-cac-aag----ac-ttagtagtcaca-ctcctgg-at-agttgcccgag--agaaatgaa-aa-----tg-t--gtgtt
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_olivaceus.k141_1000828                                1640 79 -      2944 ---AT-GTttt-aacaaatat-------t-----------------t------------cc-tgc-aag----ac-ttagcaatcaca-ctactgg-ac-agttgcccgag--ataaatgaa-aa-----ca-t--gtgta
i Cebus_olivaceus.k141_1000828                           C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         3779 82 +     31688 tataa-agttt-actgtatag-------t-----------------t------------ac-cat-aag----ta-ttagcaatcaca-catctgg-gt-atttacccaag--agaaatgaa-aa-----ca-t--aggta
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12230140 81 +  27778364 tatca-agttt-aac-----ata--cagt-----------------t------------aa-cat-gag----ac-acagcgatcaca-ctcctg--gt-attcacccaag--agaaatgaa-ag-----ca-t--atgca
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1167 81 -     25243 tatca-agttt-aac-----ata--cagt-----------------t------------aa-cat-gag----ac-acagcgatcaca-ctcctg--gt-attcacccaag--agaaatgaa-ag-----ca-t--atgca
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4473257 81 +   4669795 tctaT-GGTTT-AATGTATAT-------T-----------------T------------CC-TGT-AAG----AC-TTAGCGGTCACA-CTCCTGG-AT-AGTTGCc-aag--aggaatgaa-aa-----ca-t--atgta
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        11804 82 -     19203 tctat-ggttt-aatgtatat-------t-----------------t------------cc-tgt-aag----ac-ttagtggtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--acgta
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           6226 82 +      8260 tctat-ggttt-aatgtatat-------t-----------------t------------cc-tgt-aag----ac-ttagcggtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           6453 82 +     27781 tctat-ggttt-aatgtatat-------t-----------------t------------cc-tgt-aag----ac-ttggcggtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         6608 82 -     20310 tatat-ggttt-aatgtatat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--aggta
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           9587 82 +     29689 tatat-ggttt-aatgtatat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--aggta
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            4018 82 +      9989 tatac-ggttt-aatgtatat-------t-----------------t------------cc-tgt-aag----ac-ttggcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--aggta
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          12266 82 -     27936 tacat-ggttt-aatgtatat-------t-----------------t------------cc-tat-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--aggta
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            1142 82 -     17152 tatat-ggttt-aatgtatat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--aggta
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38814670 82 +  39242232 tatat-ggttt-aatgtatat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--aggta
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21220371 82 -  21565898 tatat-ggttt-aatgtatat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--aggta
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       37490 82 -     53127 tatat-ggttt-aatgtatat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--aggta
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        4750 82 +      7159 tatat-ggttt-aatgtatat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--aggta
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       12293 82 -     27947 tatat-ggttt-aatgtatat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--aggta
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         12266 82 +     17596 tatat-ggttt-aatgtatat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--aggta
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          1489 82 +     26000 tatac-ggttt-aatgtatac-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            6191 44 -      6351 --------------------------------------------------------------------------c-ctggcggtcac-gctcccgg-gt-gtttgcccaag--gaaagtgaa-aa----------------
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       I 18 I 6
s Cheirogaleus_major.k141_333249                             19388 75 -     52598 tataa-agttt-aatgtgcag-------t-----------------t------------ac-cat-aag----ac---agcaatcaca-atcttag-gt-atttacccaac--agatatgaa-aa-----ca-t-------
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           14733 80 +     57038 tataa-agttt-aatgtgtag-------t-----------------t------------ac-cat-aag----ac---agcaatcaca-atcttag-gt-attttcccaac--agatatgaa-aa-----ca-t--atgta
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chlorocebus_aethiops.ctg25                              18426237 82 -  18827391 tctat-ggttt-aatgtatat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agctgcccaag--aggaatgaa-aa-----ca-t--atgta
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       12675 82 -     50209 tctac-ggttt-aatgtatat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135419675 82 + 135778131 TCTAT-GGTTT-AATGTATAT-------T-----------------T------------CC-TGT-AAG----AC-TTAGCAGTCACA-CTCCTGG-AT-AGTTGCCCAAg--aggaatgaa-aa-----ca-t--atgta
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 16562 80 +     19366 tataa-agtta-a-------aca-aaact-----------------t-------------c-cat-aag----ac-ctagcaatcat-gctcctag-gt-atttacccaag--agaaatgaa-aa-----ca-t--gtgta
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            171661 80 +    839153 tataa-agtta-a-------aca-aaact-----------------t-------------c-cat-aag----ac-ctagcaatcat-gctcctag-gt-atttacccaag--agaaatgaa-aa-----ca-t--gtgta
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_1271534               216 55 -      1204 ------------------------------------------------------------c-cat--ag----ac-tcagcaattac--ttactag-gt-gtttc-acaaa--agaaataaa-tg-----ca-t--g--tc
i Chrysochloris_asiatica.ChrAsi_scaffold_1271534         I 94 I 135
s Colobus_angolensis.KN981557.1                            1908191 82 +   2368649 tatac-AGGTT-AATGTATAT-------T-----------------T------------CC-TGT-AAG----AC-TTGGCAGTCACA-CTCCTGG-AT-AGTTGCCcaag--aggaatgaa-aa-----ca-t--aTGCA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199947867 82 + 200372422 tatac-gggtt-aatgtatat-------t-----------------t------------cc-tgt-aag----ac-ttggcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgca
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              34729 82 +     84244 tatac-gggtt-aatgtatat-------t-----------------t------------cc-tgt-aag----ac-ttggcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgca
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17547310 37 -  53390261 tctaa-aattt-aac-----ata--caga-----------------t------------ac-cgt-aat----ac-ccagca-----------------------------------------------------------
i Condylura_cristata.JH655891.1                          C 0 I 44
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          12719 62 -     20389 ----------------------------t-----------------t------------gc-cat-aag----ac-ccagcaatcaca-gtcctg--at-atttacccaag--agaaataaa-aa-----ca-c--atgca
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 21 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27187 81 -     87169 taaaa-agttt-aat-----atata--gt-----------------t------------ac-cat-aaa----tc-tcagcaatcata-ctcctg--gt-atttacccaac--agaaacgaa-aa-----ca-t--aagta
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12535595 80 -  12879189 tataa-agttt-aatgtgtag-------t-----------------t------------ac-cat-aag----ac---agcaatcaca-atcttgg-gc-atttacccaag--agaaatgaa-aa-----ca-t--atgta
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8628589 81 +  20541912 tataa-agctt-agc-----ata--cagt-----------------t------------cc-cat-aag----at-ccaacagtcaca-cccatg--gt-atttatccaag--agacctgaa-aa-----ta-t--acgca
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  671991 81 +   1390856 tataa-agtgt-aac-----atata--gt-----------------t------------ca-cat-aag----ac-acagcgatcaca-ctcctg--gt-attcacccaag--agaaatgaa-ag-----ca-t--atgca
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    4748 81 +    198055 tatca-agttt-aac-----ata--cagt-----------------t------------aa-cat-gag----ac-acagccatcaca-ctcctg--gt-attcacccaag--agaaatgaa-ag-----ca-t--atgca
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Echinops_telfairi.JH980293.1                            48778197 56 + 111700974 ------------------------------------------------------------c-cat-aag----ac-ttagcaattac--c---taa-gt-agctgggcaaa--agaaataaa-ag-----ta-t--atgta
i Echinops_telfairi.JH980293.1                           I 2 C 0
s Eidolon_helvum.KE759718.1                                   9224 80 +     11740 cctaa-agttt-aac-----ata--cagt-----------------t------------ac-cac-aaa----ac-ccagcaatcaca-ctcctg--g--atttacccaag--agaaatgaa-aa-----ca-t--atgca
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Enhydra_lutris.KZ291758.1                               16328026 81 -  41312741 tataa-agttt-aac-----at--gcagt-----------------t------------ac-cat-aaa----ac-ccagcaatcaca-ctctcg--gt-atttacccaag--agaaatgaa-aa-----ca-t--atgca
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1282052 81 +   4378816 tataa-aattt-aac-----attta--gt-----------------t------------ac-cat-aaa----ac-ccagtggtcaca-ctcctg--gt-actcacccaag--agaaatgaa-ag-----ca-t--gtgca
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18529873 81 -  39960074 tataa-aattt-aac-----attta--gt-----------------t------------ac-cat-aaa----ac-ccagtggtcaca-ctcctg--gt-actcacccaag--agaaatgaa-ag-----ca-t--gtgca
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               31888 81 +    498745 tataa-aattt-aac-----attta--gt-----------------t------------ac-cat-aaa----ac-ccagtggtcaca-ctcctg--gt-actcacccaag--agaaatgaa-ag-----ca-t--gtgca
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21202865 82 -  21539334 tctat-ggttt-aatgtatat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              12080 80 -     14127 tataa-agttt-aatgtgtag-------t-----------------t------------ac-tgt-aag----ac---agcaatcaca-atcttag-gt-atttacccaag--agatatgaa-aa-----ca-t--atgta
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                4778 80 -     16928 tataa-agttt-aatgtgtag-------t-----------------t------------ac-cat-aag----ac---agcaatcaca-atcttag-gt-atttacccaag--agatatgaa-aa-----ca-t--atgta
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              13815 80 -     25546 tataa-agttt-aatgtgtag-------t-----------------t------------ac-cgt-aag----ac---agcaatcaca-atcttag-gt-atttacccaag--agatatgaa-aa-----ca-t--atgta
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            11005 80 +     26330 tataa-agctt-aacgtgtag-------t-----------------t------------ac-cat-aag----ac---agcaatcaca-atcttag-gt-atttacccaag--agatatgaa-aa-----ca-t--atgta
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 12244 80 +     23973 tataa-agttt-aatgtgtag-------t-----------------t------------ac-cat-aag----ac---agcaatcaca-atcttag-gt-atttacccaag--agatatgaa-aa-----ca-t--atgta
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                11005 80 +     75513 tataa-agctt-aacgtgtag-------t-----------------t------------ac-cat-aag----ac---agcaatcaca-atcttag-gt-atttacccaag--agacatgaa-aa-----ca-t--atgta
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  8947 80 +     97555 tataa-agttt-aatgtgtag-------t-----------------t------------ac-cgt-aag----ac---agcaatcaca-atcttag-gt-atttacccaag--agatatgaa-aa-----ca-t--atgta
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            11883 80 +     26496 tataa-agttt-aatgtgtag-------t-----------------t------------ac-cgt-aag----ac---agcaatcaca-atcttag-gt-atttacccaag--agatatgaa-aa-----ca-t--atgta
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  2480 80 -     17153 tataa-agttt-aatgtgtag-------t-----------------t------------ac-cgt-aag----ac---agcaatcaca-atcttag-gt-atttacccaag--agatatgaa-aa-----ca-t--atgta
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              12056 80 +    111500 tataa-agttt-aatgtgtag-------t-----------------t------------ac-tgt-aag----ac---agcaatcaca-atcttag-gt-atttacccaag--agatatgaa-aa-----ca-t--atgta
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20235881 81 + 206538554 tacca-agttt-aac-----atat--tgt-----------------t------------ac-cat-aaa----ac-tcagcaaccaca-ctcctg--tt-atttacccaac--agaaacgaa-aa-----ta-t--atatg
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20194724 81 + 205367284 tacca-agttt-aac-----atat--tgt-----------------t------------ac-cat-aaa----ac-tcagcaaccaca-ctcctg--tt-atttacccaac--agaaacgaa-aa-----ta-t--atatg
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  8238 81 -     36744 tacca-agttt-aac-----atat--tgt-----------------t------------ac-cat-aaa----ac-tcagcaaccaca-ctcctg--tt-atttacccaac--agaaacgaa-aa-----ta-t--atatg
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     424604  7 -    453645 catgt-ag-------------------------------------------------------------------------------------------------------------------------------------
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             2311  7 +     11339 catgt-ag-------------------------------------------------------------------------------------------------------------------------------------
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1959596                            6119  7 +      6795 catgt-ag-------------------------------------------------------------------------------------------------------------------------------------
i Galagoides_demidoff.k141_1959596                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_416291                417 77 +      1204 tataa-agttt-aac-----a-------g-----------------t------------ac-cct-aag----ac-ttagcaatcaca-ctcctgg-gt-atttacccaag--agaaatgaa-aa-----ca-t--atgta
i Galeopterus_variegatus.GalVar_scaffold_416291          I 319 C 0
s Gorilla_beringei.k141_3596273                              13635 82 -     32273 tatac-ggttt-aacatatat-------t-----------------t------------cc-tgt-aag----ac-ttagcaatcaca-ctcctgg-at-agttgcacaag--agaaatgaa-aa-----ca-t--atgta
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.CYUI03001814.1                             30145 82 -     31004 tatac-ggttt-aacgtatat-------t-----------------t------------cc-cgt-aag----ac-ttagcaatcaca-ctcctgg-at-agttgcccaag--agaaatgaa-aa-----ca-t--atgta
i Gorilla_gorilla.CYUI03001814.1                         I 329 I 184
s Hapalemur_alaotrensis.k141_170648                           5134 80 -     19426 tataa-aattt-aatgtgtag-------t-----------------t------------ac-cat-aag----ac---agcaatcaca-atcttag-gt-atttacacaag--agatatgaa-aa-----ca-t--atgta
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             10283 80 -     15286 tataa-agttt-aatgtgtag-------t-----------------t------------ac-cat-aag----ac---agcaatcaca-atcttag-gt-atttacacaag--agatatgaa-aa-----ca-t--atgta
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             11922 80 +     18253 tataa-aattt-aatgtgtag-------t-----------------t------------ac-cat-aag----ac---agcaatcaca-atcttag-gt-atttacacaag--agatatgaa-aa-----ca-t--atgta
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         12023 80 -     41752 tataa-aattt-aatgtgtag-------t-----------------t------------ac-cat-aag----ac---agcaatcaca-atcttag-gt-atttacacaag--agatatgaa-aa-----ca-t--atgta
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         11861 80 -     16460 tataa-aattt-aatgtgtag-------t-----------------t------------ac-cat-aag----ac---agcaatcaca-atcttag-gt-atttacacaag--agatatgaa-aa-----ca-t--atgta
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               241032 76 +    327341 tcaaa-agttt-aac-----atata--gt-----------------t------------ac-cat-aaa----tc-tcagcaatcaca-ctcttg--gt-atttacccaac--aga-----a-aa-----ca-t--atgta
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_403422                 377 44 -       893 ------------------------------------------------------------t-ggt-aag----gc-tcagcaaccat--gttgtac-at-actttctcaaa--agag------------------------
i Heterohyrax_brucei.HetBruBak_scaffold_403422           I 2 C 0
s Hipposideros_armiger.JXIK01000431.1                       110516 60 +   1711038 -----------------------------------------------------------ac-cat-aag----ac-ctagcaatcata-cttctg--gt-atttacccaag--agaaatgaa-aa-----ca-t--atgca
i Hipposideros_armiger.JXIK01000431.1                    I 21 C 0
s Hipposideros_galeritus.HipGal_scaffold_216130                589 60 -      1713 -----------------------------------------------------------ac-cat-aag----ac-ccagcaatcata-cttctg--gt-atttactcaag--agaaatgaa-aa-----ca-t--atgca
i Hipposideros_galeritus.HipGal_scaffold_216130          I 117 I 638
s Hoolock_leuconedys.ctg274                                    432446 82 +    630532 tatat-ggttt-aacgtatat-------t-----------------t------------cc-cat-aag----ac-ttagcaatcaca-ctcctgg-at-agttgcccaag--agaaatgaa-aa-----ca-t--atgta
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  43164 81 +     55795 taaaa-agttt-aac-----atata--gt-----------------t------------ac-cat-aaa----tc-tcagcaatcaaa-ctcctg--gt-atttatccaac--agaaatgaa-aa-----ca-t--atgta
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_232023                                 212 82 -     12752 tatat-ggttt-aatgtatat-------t-----------------t------------cc-cat-aag----ac-ttagcaatcaca-ctcctgg-at-agttgcccaag--agaaatgaa-aa-----ca-t--atgta
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                                256 82 +     14092 tatat-ggttt-aatgtatat-------t-----------------t------------cc-cat-aag----ac-ttagcaatcaca-ctcctgg-at-agttgcccaag--agaaatgaa-aa-----ca-t--atgta
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189541039 82 - 191637585 tatat-ggttt-aacgtatat-------t-----------------t------------cc-cat-aag----ac-ttagcaatcaca-ctcctgg-at-agttgcccaag--agaaatgaa-aa-----ca-t--atgta
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3333933 82 -  11177569 tatat-ggttt-aacgtatat-------t-----------------t------------cc-cat-aag----ac-ttagcaatcaca-ctcctgg-at-agttgcccaag--agaaatgaa-aa-----ca-t--atgta
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_3655594                                   20828 80 +     31101 tataa-agttt-aatgtgcag-------t-----------------t------------ac-cat-atg----ac---agcaatcaca-atcttag-gt-atttacccaag--agatatgaa-aa-----ca-t--atgta
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15522369 80 -  30322482 tataa-agttt-aatgtgtag-------t-----------------t------------ac-cat-aag----ac---agcaatcaca-atcttag-gt-atttacacaag--agatatgaa-aa-----ca-t--atgta
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        5344 76 +     64341 ------gcttt-agcaaatat-------t-----------------t------------cc-cac-aag----ac-ttagcaatcgca-ctcctgg-at-ggttgcccgag--agaaatgct-aa------g-t--tagtt
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           2405 76 +      4941 ------ggttt-agcaaatat-------t-----------------t------------cc-cac-aag----ac-ttagcaatcgca-ctcctgg-at-ggttgcccgag--agaaatgct-aa------g-t--tagtt
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        5271 78 +     35603 ---at-ggttt-agcaaatat-------t-----------------t------------cc-cgt-aag----ac-ttagcaatcaca-ctcctgg-at-ggttgcccgag--agaaatgct-aa------g-t--tagtt
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    26744 75 +     38576 ---a-----tt-aacaaatat-------t-----------------t------------cc-cgc-aag----ac-ttagcaatcaca-ctcctgg-at-agttgccggag--agaaataaa-aa-----cg-t--gtgtt
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         23441 75 +     66356 ---a-----tt-aacaaatat-------t-----------------t------------cc-cgc-aag----ac-ttagcaatcaca-ctcctgg-at-agttgccggag--agaaataaa-aa-----cg-t--gtgtt
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          9266 80 -     23766 tataa-agttt-aatgtgtag-------t-----------------t------------at-cat-aag----ac---agcaatcaca-atctcag-gt-atttacccaag--agatatgaa-aa-----ca-t--atgta
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             27331 80 +     45836 tataa-agttt-aatgtgtag-------t-----------------t------------at-cat-aag----ac---agcaatcaca-atctcag-gt-atttacccaag--agatatgaa-aa-----ca-t--atgta
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_320948                          1437 80 -      1719 tataa-agttt-aatgtgtag-------t-----------------t------------ac-cat-aag----ac---agcaatcaca-atcttag-gt-atttacccaag--agatatgaa-aa-----ta-t--atgta
i Lepilemur_ruficaudatus.k141_320948                     I 10 I 38
s Lepilemur_septentrionalis.k141_185316                      25268 79 +     54090 tataa-agttt-aatgtgtag-------t-----------------t------------at-cat-aag----ac---agcaatcaca-atctcag-gt-atttacccaag--agatatgaa-aa------a-t--atgta
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3041563 81 +   3914936 tataa-agttt-aac-----atgta--gt-----------------t------------ac-cat-aaa----ac-ccagcaatcaca-ctcctg--gt-atttacccaag--agaaacaaa-aa-----ca-t--atgca
i Leptonychotes_weddellii.KB714746.1                     I 1020 C 0
s Lepus_americanus.LepAme_scaffold_107385                     4240 82 -     14121 tataa-agttt-aag-----ata--ca-g----c------------t------------ac-ctt-aag----at-ctggcaatcaca-ctcccga-gt-attgatccaat--agaaacaaa-aa-----ca-t--atgta
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1434802 82 +   1826925 tctat-ggttt-aatgtatat-------t-----------------t------------cc-tgt-aag----ac-ttagcggtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                            4215700 59 -  43346337 ------------------------------------------------------------c-ctt-aag----ac-tcagcaattac--ttcctag-tt-gtttatccata--agaaataaa-ag-----ca-t--gcgta
i Loxodonta_africana.GL010049.1                          I 2 C 0
s Loris_lydekkerianus.k141_2539221                            4063  7 +     11245 catat-ag-------------------------------------------------------------------------------------------------------------------------------------
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1002902  7 +   6120653 catat-ag-------------------------------------------------------------------------------------------------------------------------------------
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17953964 81 -  59628241 aataa-aggtt-aac-----atgta--gt-----------------t------------ac-cat-aaa----ac-ccagtaatcact-ctcctg--gt-atttgcccaag--agaaacgaa-aa-----ca-t--atgca
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               4615 82 +     40492 tctat-ggttt-aatgtatat-------t-----------------t------------cc-tgt-aag----ac-ttagcggtcaca-ctcctgg-at-agtcgcccaag--aggaatgaa-aa-----ca-t--atgta
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59673877 82 +  60120075 tctat-ggttt-agtgtatat-------t-----------------t------------cc-tgt-aag----ac-ttagcggtcaca-ctcctgg-at-agtcgcccaag--aggaatgaa-aa-----ca-t--atgta
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 10371 82 -     26193 tctat-ggttt-aatgtatat-------t-----------------t------------cc-tgt-aag----ac-ttagcggtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            78175 82 -    114318 tctat-ggttt-aatgtatat-------t-----------------t------------cc-tgt-aag----ac-ttagcggtcaca-ctcctga-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  3874 82 -     23192 tctat-ggttt-aatgtatat-------t-----------------t------------cc-tgt-aag----ac-ttagcggtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                13334 82 -     29190 tctat-ggttt-aatgtatat-------t-----------------t------------cc-tgt-aag----ac-ttagcggtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  21902 82 +     37952 tctat-ggttt-aatgtatat-------t-----------------t------------cc-tgt-aag----ac-ttagcggtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186836990 82 + 187317192 tctaT-GGTTT-AATGTATAT-------T-----------------T------------CC-TGT-AAG----AC-TTAGCGGTCACA-CTCCTGG-AT-AGTTGCCcaag--aggaatgaa-aa-----ca-t--atgta
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25455553 82 -  25927173 tctaT-GGTTT-AATGTATAT-------T-----------------T------------CC-TGT-AAG----AC-TTAGCGGTCACA-CTCCTGG-AT-AGTTGCCcaag--aggaatgaa-aa-----ca-t--atgta
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  77751 82 +     89720 tctat-ggttt-aatgtatat-------t-----------------t------------cc-tgt-aag----ac-ttagcggtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 4748 82 +     20474 tctat-ggttt-aatgtatat-------t-----------------t------------cc-tgt-aag----ac-ttagcggtcaca-ctcctgg-at-agtcgcccaag--aggaatgaa-aa-----ca-t--atgta
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   4550 75 -     14993 tctat-ggttt-aatgtatat-------t-----------------t------------cc-tgt-aag----ac-ttagcggtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----c----------
i Macaca_siberu.k141_635500                              C 0 I 5
s Macaca_silenus.Contig273                                  327420 82 -    668171 tctat-ggttt-aatgtatat-------t-----------------t------------cc-tgt-aag----ac-ttagcggtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 2860 82 -     24072 tctat-ggttt-agtgtatat-------t-----------------t------------cc-tgt-aag----ac-ttagcggtcaca-ctcctgg-at-agtcgcccaag--aggaatgaa-aa-----ca-t--atgta
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               23489 82 -     45290 tctat-ggttt-aatgtatat-------t-----------------t------------cc-tgt-aag----ac-ttagcggtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 89299 98 +     94391 tataa-agttt-aac-----atata--gttaaacttaagactccgtt------------ac-cat-aag----ac-ctagcaatcaca-ctcctg--gt-atttactcaaa--agaaatgaa-aa-----cc-t--atgca
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23935076 82 -  24302211 tctat-ggttt-aatgtatat-------t-----------------t------------cc-tgt-aag----ac-ttagcggtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               349209 82 +    752769 tctat-ggttt-aatgtatat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              18157 81 +    737560 tataa-ctttt-aat-----atata--gt-----------------t------------ac-cat-gaa----ac-tcagcaatcaca-ctcctg--gt-atttacccaag--agaaatgaa-aa-----ta-c--attta
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              49541 81 -    317179 tataa-ctttt-aat-----atata--gt-----------------t------------ac-cat-gaa----ac-tcagcaatcaca-ctcctg--gt-atttacccaag--agaaatgaa-aa-----ta-t--attta
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        13321 76 -    207569 ----------------------------------------------taaaaatagaactac-cat-atg----ac-ccagcaattcca-cttctg-ggt-atttatccaaa--gaaattcaa-aa-----ta-ctaatttg
i Megaderma_lyra.MegLyr_scaffold_4542                    I 4285 T 4271
s Mellivora_capensis.MelCap_flattened_line_69365              8744 81 +     13704 tacaa-agttt-aac-----atgta--gt-----------------t------------ac-cat-aaa----ac-ccagcaatcaca-ctcttg--gt-atttacccaag--agaaatgaa-aa-----ca-t--atgca
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mico_argentatus.k141_1239457                                3526 79 -      7380 ---ac-ggttt-cacaaatat-------t-----------------t------------cc-cgc-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcctgac--agaagtgaa-aa-----tg-t--gtgtt
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               2592 79 +     18990 ---ac-ggttt-cacaaatat-------t-----------------t------------cc-cgc-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcctgac--agaaatgaa-aa-----tg-t--gtgtt
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      3531 79 -      7356 ---ac-ggttt-cacaaatat-------t-----------------t------------cc-cgc-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcctgac--agaagtgaa-aa-----tg-t--gtgtt
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18289772 80 -  93316391 TATAA-AGTTT-AATGTGTAG-------T-----------------T------------AC-CAT-AAG----AG---AGCAATCACG-Atcttag-at-atttacccaag--agatgtgaa-aa-----ca-t--atgta
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    18045 59 -    145209 ------------------------------------------------------------A-CAT-AAG----AC-TTATCAATTTC--CTCATAA-GT-AGTTAGGCAAA--ATAAATAAA-AG-----CA-T--ATGTA
i Microgale_talazaci.MicTal_scaffold_6613                I 2 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                14103 81 -     19307 catag-agttt-agc-----atgt-c-gt-----------------t------------ac-cat-aag----ac-ccaacaatcaca-ctcatg--gc-atttatccaag--agaactgaa-aa-----ca-t--atgca
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miopithecus_ogouensis.k141_534055                           6796 82 -     28506 tatat-ggttt-aatgtatat-------t-----------------t------------tc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         4431 81 -      8324 tataa-agttt-aac-----atgta--gt-----------------t------------ac-cat-aaa----ac-ccagcaatcaca-ctcctg--gt-atttacccaag--agaaacaaa-aa-----ca-t--atgca
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      7345 80 -     37649 tataa-agttt-aatgtgtag-------t-----------------t------------ac-cat-aag----ag---agcaatcaca-atcttag-gt-atttacccaag--agatgtgaa-aa-----ca-t--atgta
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 139984 80 -    366855 tagaa-agttt-tgc-----gtata--ga-----------------t------------ac-cat-aag----ac--caacaatcaca-ctcatg--gt-atttatccaaa--agaactgaa-aa-----ca-t--atacc
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   34139 81 +     37127 tcaaa-agttt-aac-----atata--gt-----------------t------------ac-cat-aaa----tc-tcagcaatcaca-ctcttg--gt-atttacccaac--aga-----a-aagacaata-g--atgta
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Mustela_putorius.JH418006.1                               299919 81 -  14710649 tataa-agttt-aac-----atgta--gt-----------------t------------ac-cat-aaa----ac-ccagcaatcaca-ctcttg--gt-atttaccaaag--agaaatgaa-aa-----ca-t--atgca
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187485 81 +    196477 tataa-agttc-a-------aca-aaact-----------------t------------gc-cat-atg----ac-ctagcaatcat-gctcccag-gt-atttatccagg--agaaatgaa-aa-----ca-t--gtata
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nasalis_larvatus.k141_413338                               12792 82 +     21681 tatat-ggttt-aatgtgtat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9148222 81 -   9404916 aataa-aggtt-aac-----atgta--gt-----------------t------------ac-cat-aaa----ac-ccagtaatcact-ctcctg--gt-atttgcccaag--agaaatgaa-aa-----ca-t--atgca
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102577823  7 - 196305487 catgt-ac-------------------------------------------------------------------------------------------------------------------------------------
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             5509  7 +      8486 catgt-ac-------------------------------------------------------------------------------------------------------------------------------------
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105748250  7 + 199412804 catgt-ag-------------------------------------------------------------------------------------------------------------------------------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1361301 82 +   3988456 tataa-agttc-aac-----ata--ca-g----c------------t------------at-ctt-aag----ac-ctggcaatcaca-ctcctgg-ct-atttacccaaa--ggaaaataa-tg-----aa-c--aggta
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              505370 81 -   2017862 tataa-agttt-aac-----atgta--gt-----------------c------------ac-cat-aaa----ac-ccagcaatcaca-ctcctg--gt-atttacccaag--agaaacaaa-aa-----ca-t--atgca
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67145085 82 + 174332312 tacaa-agttt-aag-----ata--ca-g----c------------t------------ac-ctt-cag----ac-ctggcaatcaca-ctcctga-gt-attgatccaat--agaaacaaa-aa-----ca-t--atgta
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       461186 81 -    559221 aataa-aggtt-aac-----atgta--gt-----------------t------------ac-cat-aaa----ac-ccagtaatcact-ctcctg--gt-atttgcccaag--agaaacgaa-aa-----ca-t--atgca
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         2146  7 +      8798 catgt-ag-------------------------------------------------------------------------------------------------------------------------------------
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             694310  7 -   1103335 CATGT-AG-------------------------------------------------------------------------------------------------------------------------------------
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    41732 82 +     80009 tatac-GGTTT-AACGTATAT-------T-----------------T------------CC-TGT-AAG----AC-TTAGCAATCATA-CTCCTGG-AT-Agttgcccaag--agaaatgaa-aa-----ca-t--atgta
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189140644 82 + 189151597 tatac-GGTTT-AACGTATAT-------T-----------------T------------CC-TGT-AAG----AC-TTAGCAATCACA-CTCCTGG-AT-Agttgcccaag--agaaatgaa-aa-----ca-t--atgta
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  149891 81 +    230217 tatca-agttt-aac-----atat--tgt-----------------t------------ac-cat-aaa----ac-tcagcaaccaca-ctcctg--tt-atttacccaac--agaaacgaa-aa-----ta-t--atata
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                263099 81 +  18783137 tatca-agttt-aac-----atat--tgt-----------------t------------ac-cat-aaa----ac-tcagcaaccaca-ctcctg--tt-atttacccaac--agaaacgaa-aa-----ta-t--atata
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4719734 81 -   8748460 tatca-agttt-aac-----atat--tgt-----------------t------------ac-cat-aaa----ac-tcagcaaccaca-ctcctg--tt-atttacccaac--agaaacgaa-aa-----ta-t--acata
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183440830 82 + 183742232 tctaT-GGTTT-AATGTATAT-------T-----------------T------------CC-TGT-AAG----AC-TTAGCAGTCACA-CTCCTGG-AT-AGTTGCCCAAg--aggaatgaa-aa-----ca-t--atgta
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             4523 82 +     20448 tctat-ggttt-aatgtatat-------t-----------------t------------cc-tgt-aag----ac-ttagcggtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20561329 82 +  20919399 tctat-ggttt-aatgtatat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   3267 82 +     41871 tctat-ggttt-aatgtatat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     6553 82 +     27711 tctat-ggttt-aatgtatat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  6632 82 +      9205 tctat-ggttt-aatgtatat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11352 79 -     78924 tataa-agttt-aac-----ata----gt-----------------t------------ac-cat-aaa----ac-tcagcaatcaca-ctcctg--gt-ttttagtcaag--agaaacgaa-aa-----ta-t--atgta
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            8277  7 +     13100 catgt-ag-------------------------------------------------------------------------------------------------------------------------------------
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             6655  7 +     25941 catgt-ag-------------------------------------------------------------------------------------------------------------------------------------
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Piliocolobus_badius.k141_1234363                           41298 82 +     62158 tatgt-ggttt-aatgtatat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        36028 82 +     89929 tatgc-ggttt-aatgtatat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            37444 82 +     51399 tatgc-ggttt-aatgtatat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14293682 82 -  14605196 tatgC-GGTTT-AATGTATAT-------T-----------------T------------CC-TGT-AAG----AC-TTAGCAGTCACA-CTCCTGG-AT-AGTTGCCCAAG--aggaatgaa-aa-----ca-t--atgta
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189128763 82 + 189387572 tatat-GGTTT-AACGTATAT-------T-----------------T------------CC-CAT-AAG----AC-TTAGCAATCACA-CTCCTGG-AT-Agttgcccaag--agaaatgaa-ca-----ca-t--atgta
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9568371 82 +   9816681 tatat-ggttt-aacgtatat-------t-----------------t------------cc-cat-aag----ac-ttagcaatcaca-ctcctgg-at-agttgcccaag--agaaatgaa-ca-----ca-t--atgta
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               70960 82 -     81375 tatat-ggttt-aatgtgtat-------t-----------------t------------cc-tgt-aag----ac-tcagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              2780 82 +     19060 tatat-ggttt-aatgtgtat-------t-----------------t------------cc-tgt-aag----ac-tcagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 11370 44 -     22811 ------------------------------------------------------------t-ggt-aag----gc-tcagcagccac--gttgcac-at-actttctcaaa--agag------------------------
i Procavia_capensis.ProCapCap_scaffold_85530             I 2 C 0
s Prolemur_simus.MPIZ01000396.1                            2595035 80 -   4620579 TATAA-AGTTT-AATGTGTAG-------T-----------------T------------AC-CAT-AAG----AC---AGCAATCACA-ATCTTAG-GT-ATTTACACAAG--agatatgaa-aa-----ca-t--atgtc
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     989026 80 +   2598838 TATAA-AGTTT-AATGTGCAG-------T-----------------T------------GC-CAT-AAG----AC---AGCAATCACA-atcttag-gt-atttacccaag--agatatgaa-aa-----ca-t--atgta
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          27336 80 +     38485 tataa-agttt-aatgtgcag-------t-----------------t------------gc-cat-aag----ac---ggcaatcaca-atcttag-gc-atttacccaag--agatatgaa-aa-----ca-t--atgta
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             3496 80 +      4256 tataa-agttt-aatgtgcag-------t-----------------t------------gc-cat-aag----ac---agcaatcaca-atcttag-gt-atttacccaag--agatatgaa-aa-----ca-t--atgta
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          24849 80 +     35766 tataa-agttt-aatgtgcag-------t-----------------t------------gc-cat-aag----ac---agcaatcaca-atcttag-gt-atttacccaag--agatatgaa-aa-----ca-t--atgta
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           3032 80 -     24134 tataa-agttt-aatgtgcag-------t-----------------t------------gc-cat-aag----ac---agcaatcaca-atcttag-gt-atttacccaag--agatatgaa-aa-----ca-t--atgta
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        26853 80 -     67325 tataa-agttt-aatgtgcag-------t-----------------t------------gc-cat-aag----ac---ggcaatcaca-atcttag-gt-atttacccaag--agatatgaa-aa-----ca-t--atgta
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           3089 80 -      6182 tataa-agttt-aatgtgcag-------t-----------------t------------gc-cat-aag----ac---ggcaatcaca-atcttag-gt-atttacccaag--agatatgaa-aa-----ca-t--atgta
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            13400 80 -     21811 tataa-agttt-aga-----atata--gt-----------------t------------ac-cat-aag----ac--cagcaatcaca-ctcatg--gt-atttacccaag--agaactgaa-aa-----ca-t--aggca
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         38936 81 +     42204 tataa-agttt-aac-----atgta--gt-----------------t------------ac-cat-aaa----ac-ccagcaatcaca-ctcttg--gt-atttacccaag--agaaatgaa-aa-----ca-t--atgca
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22975487 80 +  28871421 tctaa-agttt-aac-----ata--cagt-----------------t------------ac-aat-aag----ac-ccagcaatcacg-ctcctg--g--atttacccaag--agaaatgaa-aa-----ca-t--atgca
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1358576 80 +   4952924 tctaa-agttt-aac-----ata--cagt-----------------t------------ac-cat-aag----ac-ccagcaatcacg-ctcctg--g--atttacccaag--agaaatgaa-aa-----ca-t--atgca
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20273010 81 -  38429054 tatca-agttt-aac-----atat--tgt-----------------t------------ac-cat-aaa----ac-tcagcaaccaca-ctcctg--tt-atttacccaac--agaaacgaa-aa-----ta-t--atata
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             12790 82 -     91421 tatat-ggttt-aatgtgtat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7606916 82 +   7812017 tatat-ggttt-aatgtgtat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             12764 82 -     72585 tatat-ggttt-aatgtgtat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             4471 82 -     11128 tatat-ggttt-aatgtgtat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91233826 82 - 195417433 TATAT-GGTTT-AATGTGTAT-------T-----------------T------------CC-TGT-AAG----AC-TTAGCAGTCACA-CTCCTGG-AT-AGTTGCCCAAg--aggaatgaa-aa-----ca-t--atgta
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7669475 82 +   7961872 tatat-ggttt-aatgtgtat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                86497 81 -     96226 tataa-agttt-aat-----ata--cagt-----------------t------------ac-cat-aag----ac-ccagcagtcaaa-ctcctg--g-tatttacccaag--agaaatgaa-aa-----ca-c--atgca
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               5653 79 -      8359 ---at-ggttt-agcaaatat-------t-----------------t------------cc-cgc-gag----ac-ttagcaatcaca-ctcctgg-at-agttgcccgag--acaaatgaa-aa-----cg-t--gtgtt
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            11956 58 -     13588 ---------------------------------------------------------------GC-AAg----ac-ttagcaatcaca-ctcctgg-at-agttgcccgag--acaaatgaa-aa-----cg-t--gtgtt
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              5599 77 -      6207 ---at-ggttt-agcaaatat-------t-----------------t------------cc-ccc-aag----ac-ttagcagtcgca-ctcccgg-at-gcttgcccgag--agaagtgct-aa------g-t---tagt
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               11326 77 +     13640 ---at-ggttt-agcaaatat-------t-----------------t------------cc-ccc-aag----ac-ttagcaatcgca-ctcccgg-at-ggttgcccgag--agaaatgct-aa------g-t---tagt
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               6189 76 +      8564 ---at-ggttt-agcaagtat-------t-----------------t------------cc-ccc-aag----ac-ttac-aatcgca-ctcccgg-at-gcttgcccgag--agaaatgct-aa------g-t---tagt
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209466467 79 + 209938924 ---at-ggttt-agcaaatat-------t-----------------t------------cc-cgc-gag----ac-ttagcaatcaca-ctcctgg-at-agttgcccgag--acaaatgaa-aa-----cg-t--gtgtt
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 5677 76 -      9399 ---at-ggttt-agcaaatgt-------t-----------------t------------cc-ccc-aag----ac-ttag-aatcgca-ctcccgg-at-gcttgcccgag--agaaatgct-aa------g-t---tagt
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 2821 58 +      3421 ---------------------------------------------------------------GC-AAg----ac-ttagcaatcaca-ctcctgg-at-agttgcccgag--acaaatgaa-aa-----cg-t--gtgtt
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119949003 79 - 121099817 ---AT-GGTTT-AACAAGTAT-------T-----------------T------------CC-TGC-AAG----AC-TTAGCAATCACA-CTACTGG-AG-AATTGCCCGAG--AGAAATGAA-AA-----CG-T--GTGTA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       21457 79 +     46362 ---at-ggttt-aacaagtat-------t-----------------t------------cc-tgc-aag----ac-ttagcaatcaca-ctactgg-ag-agttgcccgag--agaaatgaa-aa-----tg-t--gtgta
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               21552 79 +     45824 ---at-ggttt-aacaagtat-------t-----------------t------------cc-tgc-aag----ac-ttagcaatcaca-ctactgg-ag-agttgcccgag--agaaatgaa-aa-----tg-t--gtgta
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             38180 79 -     64574 ---at-ggttt-aacaagtat-------t-----------------t------------cc-tgc-aag----ac-ttagcaatcaca-ctactgg-ag-agttgcccgag--agaaatgaa-aa-----cg-t--gtgta
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               1186 79 -     23631 ---at-ggttt-aacaagtat-------t-----------------t------------cc-tgc-aag----ac-ttagcaatcaca-ctactgg-ag-agttgcccgag--agaaatgaa-aa-----cg-t--gtgta
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 21445 79 -     61129 ---at-ggttt-aacaagtat-------t-----------------t------------cc-tgc-aag----ac-ttagcaatcaca-ctactgg-ag-agttgcccgag--agaaatgaa-aa-----tg-t--gtgta
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    152379 37 -    313613 tctaa-aattc-aac-----atat-c-ga-----------------t------------ac-cat-aag----gc-ccagca-----------------------------------------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 42
s Semnopithecus_entellus.k141_11662                          17298 82 -     19888 tatat-ggttt-aatgtgtat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      24501 82 +     39453 tatat-ggttt-aatgtgtat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            5027 82 +     27826 tattt-ggttt-aatgtgtat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             4547 82 -     19483 tatat-ggttt-aatgtgtat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      4609 82 +      7198 tatat-ggttt-aatgtgtat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         12869 82 +     15514 tatat-ggttt-aatgtgtat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               2501 37 +   1910179 tataa-agttt-agc-----atata--gc-----------------t------------ac-caa-aaa----ac-tcagca-----------------------------------------------------------
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 16
s Spilogale_gracilis.SpiGra_flattened_line_13525             29449 81 +     97271 tccta-agttg-aat-----atgta-a-t-----------------c------------ac-cat-ata----ac-ccagcaatcaca-ctcctg--gt-atttaaccaag--tgaaacaaa-aa-----ca-t--atgca
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              17032 76 -    196729 tcaaa-agttt-aac-----atata--gt-----------------t------------ag-cat-aaa----tc-tcagcaatcaca-ctcttg--gt-gtttacccaac--aga-----a-aa-----ca-t--atgta
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.JH118708.1                                      34230 81 -     47482 tgtgt-agttt-aat-----ata--caat-----------------t------------ac-cat-cag----aa-ctaggaatcacg-cccctg--gt-gtgtacccaag--agaaatgaa-aa-----ta-t--acaca
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1091081 82 -   1523678 tatat-ggttt-aacgtatat-------t-----------------t------------cc-cat-aag----ac-ttagcaatcaca-ctcctgg-at-agttgcccaag--agaaatgaa-aa-----ca-t--acgta
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 9338 82 +     41958 tatcc-agttg-atc-----ttata--gt-----------------t------------ac-cattaag----accc-agcaatccta-ctcatg--gc-atttgcccaag--agaaataaa-aa-----ca-t--acgca
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 70839 79 +    116680 tataa-agttc-a-------aca-aaact-----------------t------------gc-ca---tg----ac-ctagcaatcat-gctcccag-gt-atttatccagg--agaaatgaa-aa-----ca-t--gtata
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      117463 81 -    156842 catga-agttt-aat-----gtata--gt-----------------t------------ac-cat-aag----ac-ccagccatcaca-ctcctg--gt-attcacccaag--agaattgaa-ag-----ca-t--atgca
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    385916 81 +    539355 catga-agttt-aac-----atata--gt-----------------t------------ac-cat-aag----ac-ccagccatcaca-ctcctg--gc-attcacccaag--agaaatgaa-ag-----ca-t--atgca
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               24390 82 +     70052 tataa-agttt-tctgtatag-------t-----------------t------------ac-cat-aag----tg-ttagcaatcaca-catccgg-gt-atttacccaag--agaaatgaa-aa-----ca-t--aggta
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_2029956                               3730 82 +      4644 tataa-agttt-tctgtatag-------t-----------------t------------ac-cat-aag----tg-ttagcaatcaca-catccgg-gt-atttacccaag--agaaatgaa-aa-----ca-t--aggta
i Tarsius_wallacei.k141_2029956                          C 0 C 0
s Theropithecus_gelada.CM009954.1                        186426195 82 + 186847797 tctaT-GGTTT-AATGTATAT-------T-----------------T------------CC-TGT-AAG----AC-TTAGCAGTCACA-CTCCTGG-AT-AGTTGCCCAAg--aggaatgaa-aa-----ca-t--atgta
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   3413 73 +      8208 tgtag-aggta-a-------atatacacc-----------------t------------gt-cac-aag----ac-ctagcgggcat-gctcccgg-gt-gttta--------gaaaatgaa-gg-----cg-t--g---a
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     79646 79 +    610378 ttcaa-agttt-atc-----gta----gt-----------------t------------ac-cac-aag----ac-ccaacaaccaca-ctcatg--gt-atttatccaag--agagctgaa-at-----ca-t--acgca
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          8600 82 -     20410 tatat-ggttt-aatgtgtat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agtcgcccaag--aggaatgaa-aa-----ca-t--atgta
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    12794 82 +     15221 tatat-ggttt-aatgtgtat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        8701 82 +     19930 tatat-ggttt-aatgtgtat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agtcgcccaag--aggaatgaa-aa-----ca-t--atgta
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       5130 82 -     19997 tatat-ggttt-aatgtgtat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            45250 82 -     60166 tatat-ggttt-aatgtgtat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        12723 82 -     27529 tatat-ggttt-aatgtgtat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agtcgcccaag--aggaatgaa-aa-----ca-t--atgta
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     12664 82 -     18194 tatat-ggttt-aatgtgtat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           6397 82 -     21137 tatat-ggttt-aatgtgtat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    5100 82 -     10723 tatat-ggttt-aatgtgtat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         4252 82 +      9834 tatat-ggttt-aatgtgtat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        22568 82 +     32220 tatat-ggttt-aatgtgtat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5936667 82 +   6242583 tatat-ggttt-aatgtgtat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        5915 82 +     20839 tatat-ggttt-aatgtgtat-------t-----------------t------------cc-tgt-aag----ac-ttagcagtcaca-ctcctgg-at-agttgcccaag--aggaatgaa-aa-----ca-t--atgta
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2153426 82 +   4065304 catta-agttt-aac-----acat---gg-----------------c------------ta-cat-aag----ac-ctagcaatcgca-ctcctgc-gt-atttacccaag--tgaaatgaagaa-----aa-t--acgta
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     7045 83 -     10553 catta-agtac-ctc-----tcata---g-----------------c------------taccat-aag----ac-ctagcaatcata-ctcctgt-gt-atttactcaag--agaaatgaaaaa-----aa-c--atgta
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   52557 37 -     77625 tatca-agttc-aat-----atata--ga-----------------t------------ac-tat-aag----ac-ctagca-----------------------------------------------------------
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 44
s Ursus_maritimus.KK499267.1                               4849136 81 -   5085361 tatga-agttt-aat-----atata--gt-----------------t------------ac-cat-aaa----ac-ccagcagtcaca-ctcccg--gt-atttacccaag--agaaatgaa-aa-----ta-t--atgca
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   9718 78 +     50397 tataa-agttt-aatgtgtag-------t-----------------t------------ac-cat-aag----ac---agcaatcaca-atcttag-gt-atttacccaag--agatatgaa-aa-----ca-t--atg--
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              9772 78 +     24756 tataa-agttt-aatgtgtag-------t-----------------t------------ac-cat-aag----ac---agcaatcaca-atcttag-gt-atttacccaag--agatatgaa-aa-----ca-t--atg--
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5370596 81 -   5488506 tgtga-agttt-aac-----atat--gtt-----------------t------------ac-cat-aag----at-ccagaaatcaca-ctccta--gt-atttaaccaag--agaaataaa-aa-----ca-t--atgca
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  9632 81 -     43706 aataa-aggtt-aac-----atgta--gt-----------------t------------ac-cat-aaa----ac-ccagtaatcact-ctcctg--gt-atttgcccaaa--agaaacaaa-aa-----ca-t--atgca
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          3864 81 +     86975 tataa-agctt-aac-----atgta--gt-----------------c------------ac-cat-aaa----ac-ccagcaatcaca-ctcctg--gt-atttacccaag--agaaacaaa-aa-----ca-t--atgca
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Chiropotes_albinasus.k141_2813271                           8451 841 +     11226 I
e Cebus_unicolor.k141_219506                                 14903  0 -     16904 I
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Mus_pahari.LT608297.1                                   31352818  0 -  89631738 C
e Mus_spretus.CM004101.1                                  90750234  0 - 130317789 C
e Mus_musculus.chr8                                       87648156  0 - 129401213 C
e Mus_caroli.LT608237.1                                   84359172  0 - 120012414 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Xerus_inauris.XerIna_scaffold_48378                        22715  0 -     24430 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Spermophilus_dauricus.KZ294078.1                         1951468 299 -   3870691 I
e Sorex_araneus.JH798187.1                                13649609  2 -  18376816 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11304  0 -     12148 C
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rattus_norvegicus.chr16                                 53568239  0 +  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Psammomys_obesus.NESX01036370.1                             8401  0 -     21651 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18191985  0 -  18517816 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7577 1418 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    77382  0 +    102263 C
e Ondatra_zibethicus.OndZib_scaffold_46174                   22267 24 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11258701  7 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12180532  2 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 30759  0 +    140813 C
e Marmota_marmota.CZRN01000018.1                          33100580 298 -  40650429 I
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Ictidomys_tridecemlineatus.JH393364.1                    7518272 302 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Ellobius_talpinus.LOJH01109367.1                            3704  7 -      6299 I
e Ellobius_lutescens.LOEQ01008920.1                          17650  7 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089466 1162 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            62283 174 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    835315  0 +   1526836 C
e Crocidura_indochinensis.CroInd_scaffold_37019               1577  2 -     19598 I
e Cricetulus_griseus.LT883664.1                           11665468  2 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 48141  0 +     63868 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    136243  0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      10117 439 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     72139 576 -     89534 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     68454  0 +     87051 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       4464 30 +     62944 c-cca-t----------a-aatac---ttgcatgcaaa------tat---ta---c---a--------g
s Acinonyx_jubatus.LLWD01001279.1                           826093 30 -   1699592 c-ata-t----------a-tacac---ttgcatgcaaa------t--att-a---c---a--------g
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9509351 30 -  29979442 c-ata-t----------a-cgcac---ttgcatgcaaa------t--att-a---t---a--------g
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             78138 30 -    347723 c-ata-a----------a-catat---ttacatgcaaa------t--att-a---t---a--------g
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   12380 29 -     52922 --aca-t----------a-aatac---ttgcatgcaaa------tat---ta---c---a--------g
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         12322 29 -     28001 --aca-t----------a-aatac---ttgcatgcaaa------tat---ta---c---a--------g
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          2768 29 -     18505 --aca-t----------a-aatac---ttgcatgcaaa------tat---ta---c---a--------g
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           3617 29 -     12518 --aca-t----------a-aatac---ttgcatgcaaa------tat---ta---c---a--------g
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                              1177 30 -     27731 t-gca-t----------a-aatgc---ctggatgcaga------tat---ta---c---a--------g
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                1302 30 +      3134 t-gca-t----------a-aatgc---ctggatgcaga------tat---ta---c---a--------g
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               1437 30 -     45847 t-gca-t----------a-aatgc---ctggatgcaga------tat---ta---c---a--------g
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                22643 30 +     25266 t-gca-t----------a-aatgc---ctggatgcaga------tat---ta---c---a--------g
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           1827 30 +      2906 t-gca-t----------a-aatgc---ctggatgcaga------tat---ta---c---a--------g
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            15940 30 -     18578 t-gca-t----------a-aatgc---ctggatgcaga------tat---ta---c---a--------g
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              1327 30 +     47717 t-gca-t----------a-aatgc---ctggatgcaga------tat---ta---c---a--------g
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             1457 30 -      3544 t-gca-t----------a-aatgc---ctggatgcaga------tat---ta---c---a--------g
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             12677 30 +     50774 t-gca-t----------a-aatgc---ctggatgcaga------tat---ta---c---a--------g
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183864 30 +    412891 c-aca-g----------a-aacac---tcgcatacaaa------t--att-a---t---a--------g
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  13297 30 -     33861 t-gca-t----------g-aatac---ttggatgcaga------tat---tc---c---a--------g
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            13317 30 -     34016 t-gca-t----------g-aatac---ttggatgcaga------tat---tc---c---a--------g
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4295714 30 -   5030052 T-GCA-T----------G-AATAC---TTGGATGCAGA------TAT---TC---C---A--------G
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             13319 30 -     34685 t-gca-t----------g-aatac---ttggatgcaga------tat---tc---c---a--------g
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               26440 30 -     47192 t-gca-t----------g-aatac---ttggatgcaga------tat---tc---c---a--------g
i Aotus_vociferans.k141_344750                           C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3276 30 +     43469 c-aca-g----------a-aacac---ttgcatacaaa------t--att-a---t---a--------g
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  52052 27 -     92717 c-aca-t----------a-aatac---tcacctgcaaa------t------a---t---a--------g
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              52681 27 +     85213 c-aca-t----------a-aatac---tcacctgcaaa------t------a---t---a--------g
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             3059 30 -     10423 t-gca-t----------a-aatac---gtgcaggcaga------tat---tc---c---g--------g
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             22559 30 +     31915 t-gca-t----------a-aatac---ttccatgcaga------tat---tc---c---a--------g
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            3029 30 +      5267 t-gca-c----------a-aatat---gtgcaggcaga------tat---tc---c---g--------g
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23588243 30 - 189096842 t-gca-c----------a-aatat---gtgcaggcaga------tat---tc---c---G--------G
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              9773 30 -     12001 t-gca-c----------a-aatat---gtgcaggcaga------tat---tc---c---g--------g
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10001190 30 -  17673402 t-aca-g----------g-aatac---ttgcatgcaattat---t------a---t---a--------g
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2333648 30 -   7040546 t-aca-g----------g-aatac---ttgcatgcaattat---t------a---t---a--------g
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  401930 30 -   1652518 t-aca-g----------g-aatac---ttgcatgcaattat---t------a---t---a--------g
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17798097 17 -  60362399 c-ata-T----------A-CATATTGATTG---------------------------------------
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184154 17 -    185531 c-ata-t----------a-catattgattg---------------------------------------
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9033540 17 -   9314153 c-ata-t----------a-catattgATTG---------------------------------------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17957805 17 -  59632846 c-ata-t----------a-catattgATTG---------------------------------------
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18499317 17 +  63665305 c-ata-t----------a-catattgATTG---------------------------------------
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           154350 30 -    496798 C-ACA-T----------A-AATAC---TTGCCTGCAAA------tat---ta---t---a--------g
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                3638 30 -     11696 c-ata-g----------a-aacac---ttgcatacaaa------t--att-a---t---a--------g
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     91793 30 +    217609 t-ata-g----------a-aatac---ttgcatgcaaa------t------attac---a--------g
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          7683 30 -     11392 t-gca-t----------a-aatac---gtgcaggcaga------tat---tc---c---g--------g
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               3781 30 -      7577 t-gca-t----------a-aatac---gtgcaggcaga------tat---tc---c---g--------g
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_olivaceus.k141_1000828                                1719 30 -      2944 t-gca-t----------a-aatac---taggatgcaga------tat---tc---c---a--------g
i Cebus_olivaceus.k141_1000828                           C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         3861 30 +     31688 c-aca-t----------a-aatac---ttgcctgcaaa------tat---ta---t---a--------g
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12230221 30 +  27778364 c-aca-g----------a-aatat---ttgcatgcagg------t--atg-a---t---a--------g
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1248 30 -     25243 c-aca-g----------a-aatat---ttgcatgcagg------t--atg-a---t---a--------g
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4473338 29 +   4669795 --ACA-T----------A-AATAC---TTGCATGCAGA------TAT---TA---C---A--------G
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        11886 29 -     19203 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           6308 29 +      8260 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           6535 29 +     27781 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         6690 29 -     20310 --aca-t----------a-aatac---ttgcatgcaaa------tat---ta---c---a--------g
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           9669 29 +     29689 --aca-t----------a-aatac---ttgcatgcaaa------tat---ta---c---a--------g
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            4100 29 +      9989 --aca-t----------a-aatac---ttgcatgcaaa------tat---ta---c---a--------g
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          12348 29 -     27936 --aca-t----------a-aatac---ttgcatgcaaa------tat---ta---c---a--------g
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            1224 29 -     17152 --aca-t----------a-aatac---ttgcatgcaaa------tat---ta---c---a--------g
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38814752 29 +  39242232 --aca-t----------a-aatac---ctgcatgcaaa------tat---ta---c---a--------g
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21220453 29 -  21565898 --aca-t----------a-aatac---ttgcatgcaaa------tat---ta---c---a--------g
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       37572 29 -     53127 --aca-t----------a-aatac---ttgcatgcaaa------tat---ta---c---a--------g
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        4832 29 +      7159 --aca-t----------a-aatac---ttgcatgcaaa------tat---ta---c---a--------g
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       12375 29 -     27947 --aca-t----------a-aatac---ttgcatgcaaa------tat---ta---c---a--------g
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         12348 29 +     17596 --aca-t----------a-aatac---ttgcatgcaaa------tat---ta---c---a--------g
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          1571 29 +     26000 --aca-t----------a-aatac---ttgcatgcaaa------tat---ta---c---a--------g
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            6241 29 -      6351 c-aca-g----------c-aacac---ctgga--caaa------tat-t-ta---c---a--------g
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       I 6 C 0
s Cheirogaleus_major.k141_333249                             19463 24 -     52598 ----a-t----------a-aatac---ttgcatgcaaa------t------a---t---g--------g
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           14813 27 +     57038 c-aca-t----------a-aatac---ttgcatgcaaa------t------a---t---g--------c
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chlorocebus_aethiops.ctg25                              18426319 29 -  18827391 --aca-t----------a-aatac---ttgcatgcaaa------tat---ta---c---a--------g
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       12757 29 -     50209 --aca-t----------a-aatac---ttgcatgcaaa------tat---ta---c---a--------g
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135419757 29 + 135778131 --ACA-T----------A-AATAC---TTGCATGCAAA------TAT---TA---C---A--------G
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 16642 32 +     19366 c-aca-t----------aaaacac---ctgcacacaaa------tat-t-ta---t---a--------g
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            171741 32 +    839153 c-aca-t----------aaaacac---ctgcacacaaa------tat-t-ta---t---a--------g
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_2561901               266 31 -       464 c-aca-t----------a-aaaac---ttgactgaaaa------tgt-t-tt---t---c--------a
i Chrysochloris_asiatica.ChrAsi_scaffold_2561901         I 52 C 0
s Colobus_angolensis.KN981557.1                            1908273 29 +   2368649 --ACA-T----------A-AATAC---TTGCATGCAGA------CAT---TA---C---A--------G
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199947949 29 + 200372422 --aca-t----------a-aatac---ttgcatgcaga------cat---ta---c---g--------g
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              34811 29 +     84244 --aca-t----------a-aatac---ttgcatgcaga------cat---ta---c---a--------g
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17547391 22 -  53390261 c-aca-TAtctttatatt-tgtat---a-----------------------------------------
i Condylura_cristata.JH655891.1                          I 44 I 8
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          12781 30 -     20389 c-aca-g----------a-aatac---ttgcatgcaaa------tat---ta---c---a--------g
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               1579 25 -     19598 -----------------A-AATTA---TTACAAACAAA------AAT---TA---T---A--------G
i Crocidura_indochinensis.CroInd_scaffold_37019          I 2 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27268 30 -     87169 c-ata-t----------a-cacac---ttgcatgcaaa------t--agt-a---t---a--------g
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12535675 30 -  12879189 c-aca-t----------a-aatac---ttgcatgcaaa------tgt---ta---t---a--------g
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8628670 30 +  20541912 c-aca-g----------a-aacac---ttgcatacaaa------t--gtt-a---t---a--------g
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672072 30 +   1390856 c-aca-g----------a-aatat---ttgcatgcaga------t--att-a---t---a--------g
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    4829 23 +    198055 c-aca-g----------a-aatat---ttgcatgcagg------t------------------------
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 2
s Echinops_telfairi.JH980293.1                            48778253 23 + 111700974 c-aca-c----------a-aatat---attactcaaaa------a------------------------
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.KE759718.1                                   9304 30 +     11740 c-aca-g----------a-tatac---ttgaatgtaaa------tac---ta---t---a--------g
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Enhydra_lutris.KZ291758.1                               16328107 30 -  41312741 c-ata-t----------g-cacat---ttgcatgcaaa------t--att-a---t---a--------g
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1282133 30 +   4378816 t-aca-g----------a-aatat---ttgcatgcaga------t--att-a---t---a--------g
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18529954 30 -  39960074 t-aca-g----------a-aatat---ttgcatgcaga------t--att-a---t---a--------g
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               31969 30 +    498745 t-aca-g----------a-aatat---ttgcatgcaga------t--att-a---t---a--------g
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21202947 29 -  21539334 --aca-t----------a-aatac---ttgcatgcaaa------tat---ta---c---a--------g
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              12160 27 -     14127 c-ata-t----------a-aatac---ttctatgcaaa------t------a---t---a--------g
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                4858 27 -     16928 c-ata-t----------a-aatac---ttctatgcaaa------t------a---t---a--------g
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              13895 27 -     25546 c-aca-t----------a-aatac---ttgcatgcaaa------t------a---t---a--------g
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            11085 27 +     26330 c-aca-t----------a-aatac---ttgcatgcaaa------t------a---t---a--------g
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 12324 27 +     23973 c-ata-t----------a-aatac---ttctatgcaaa------t------a---t---a--------g
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                11085 27 +     75513 c-aca-t----------a-aatac---ttacatgcaaa------t------a---t---a--------g
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  9027 27 +     97555 c-ata-t----------a-aatac---ttctatgcaaa------t------a---t---a--------g
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            11963 27 +     26496 c-aca-t----------a-aatac---ttgcatgcaaa------t------a---t---a--------g
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  2560 27 -     17153 c-ata-t----------a-aatac---ttctatgcaaa------t------a---t---a--------g
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              12136 27 +    111500 c-ata-t----------a-aatac---ttctatgcaaa------t------a---t---a--------g
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20235962 30 + 206538554 c-ata-t----------a-tacac---ttgcatgcaaa------t--att-a---c---a--------g
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20194805 30 + 205367284 c-ata-t----------a-tacac---ttgcatgcaaa------t--att-a---c---a--------g
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  8319 30 -     36744 c-ata-t----------a-tacac---ttgcatgcaaa------t--att-a---c---a--------g
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_416291                494 30 +      1204 c-aca-t----------a-aatat---ttacatgcaaa------tat---ta---t---a--------g
i Galeopterus_variegatus.GalVar_scaffold_416291          C 0 I 290
s Gorilla_beringei.k141_3596273                              13717 30 -     32273 c-cca-t----------a-aatac---ttgcatgcaaa------tat---ta---c---a--------g
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186335865 30 + 186649187 c-cca-t----------a-aatac---ttgcatgcaaa------tat---ta---c---a--------g
i Gorilla_gorilla.LT578341.1                             I 82 C 0
s Hapalemur_alaotrensis.k141_170648                           5214 27 -     19426 c-aca-t----------a-aatac---ttgcatgcaaa------t------a---t---a--------a
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             10363 27 -     15286 c-aca-t----------a-aatac---ttgcatgcaaa------t------a---t---a--------a
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             12002 27 +     18253 c-aca-t----------a-aatac---ttgcatgcaaa------t------a---t---a--------a
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         12103 27 -     41752 c-aca-t----------a-aatac---ttgcatgcaaa------t------a---t---a--------a
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         11941 27 -     16460 c-aca-t----------a-aatac---ttgcatgcaaa------t------a---t---a--------a
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               241108 30 +    327341 t-ata-t----------a-cacac---ttgcatgcaaa------t--att-a---t---a--------c
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_403422                 421 27 -       893 ------t----------a-aaaac---ttgcatgtaaa------tgt-t-ta---t---c--------t
i Heterohyrax_brucei.HetBruBak_scaffold_403422           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       110576 30 +   1711038 t-aca-g----------a-aatac---ttgcatgcaaa------tat---ta---t---a--------g
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               42002 30 +     43066 c-aca-g----------a-aatag---ttgcatgcaaa------tat---ta---t---a--------g
i Hipposideros_galeritus.HipGal_scaffold_29171           I 80 C 0
s Hoolock_leuconedys.ctg274                                    432528 30 +    630532 c-aca-t----------a-aatac---ttgcatgcaaa------tat---ta---c---a--------g
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  43245 30 +     55795 c-ata-t----------a-cacac---ttgcaggcaaa------t--att-a---t---a--------g
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_232023                                 294 30 -     12752 c-aca-t----------a-aatac---ttgcatgcaaa------tat---ta---c---a--------g
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                                338 30 +     14092 c-aca-t----------a-aatac---ttgcatgcaaa------tat---ta---c---a--------g
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189541121 30 - 191637585 c-aca-t----------a-aatac---ttgcatgcaaa------tat---ta---c---a--------g
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3334015 30 -  11177569 c-aca-t----------a-aatac---ttgcatgcaaa------tat---ta---c---a--------g
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_3655594                                   20908 23 +     31101 c-aca-t----------a-aatac-------atgcaaa------t------a---t---a--------g
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15522449 27 -  30322482 c-aca-t----------a-aatac---ttgcatgcaaa------t------a---t---a--------a
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        5420 13 +     64341 ---------------------------------gcaga------tat---tc---c---a--------g
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           2481 13 +      4941 ---------------------------------gcaga------tat---tc---c---a--------g
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        5349 13 +     35603 ---------------------------------gcaga------tat---tc---c---a--------g
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    26819 30 +     38576 t-gca-t----------a-aatac---ttgcatgcaga------tat---tc---c---a--------g
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         23516 30 +     66356 t-gca-t----------a-aatac---ttgcatgcaga------tat---tc---c---a--------g
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          9346 27 -     23766 c-aca-t----------g-aatac---ttgcatgcaaa------t------a---t---a--------g
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             27411 27 +     45836 c-aca-t----------g-aatac---ttgcatgcaaa------t------a---t---a--------g
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_667017                          1949 27 -      2151 c-aca-t----------g-aatac---ttgcatgcaaa------t------a---t---a--------g
i Lepilemur_ruficaudatus.k141_667017                     I 80 C 0
s Lepilemur_septentrionalis.k141_185316                      25347 27 +     54090 c-aca-t----------g-aatac---ttgcatgcaaa------t------a---t---a--------g
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3041644 30 +   3914936 c-tta-t----------a-cacac---ttgcatgcaaa------t--att-a---t---a--------g
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     4322 16 -     14121 g-acg-t----------a-aatat---ttgaa-------------------------------------
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 11
s Lophocebus_aterrimus.ctg367                              1434884 29 +   1826925 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                            4215759 31 -  43346337 c-aca-t----------a-aaaac---ttgcaagtaaa------tat-t-ta---t---c--------a
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17954045 17 -  59628241 c-ata-t----------a-catattgATTG---------------------------------------
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               4697 29 +     40492 --aca-t----------a-aatcc---ttgcatgtaga------tac---ta---c---a--------g
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59673959 29 +  60120075 --aca-t----------a-aatcc---ttgcatgcaga------tac---ta---c---a--------g
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 10453 29 -     26193 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            78257 29 -    114318 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  3956 29 -     23192 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                13416 29 -     29190 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  21984 29 +     37952 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186837072 29 + 187317192 --ACA-T----------G-AATAC---TTGCATGCAGA------TAT---TA---C---A--------G
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25455635 29 -  25927173 --ACA-T----------A-AATAC---TTGCATGCAGA------TAT---TA---C---A--------G
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  77833 29 +     89720 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 4830 29 +     20474 --aca-t----------a-aatcc---ttgcatgcaga------tat---ta---c---a--------g
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   4630 29 -     14993 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Macaca_siberu.k141_635500                              I 5 C 0
s Macaca_silenus.Contig273                                  327502 29 -    668171 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 2942 29 -     24072 --aca-t----------a-aatcc---ttgcatgcaga------tac---ta---c---a--------g
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               23571 29 -     45290 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 89397 30 +     94391 c-aca-g----------a-tatac---ttgaatataaa------tcc---ta---t---a--------g
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23935158 29 -  24302211 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               349291 29 +    752769 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              18238 30 +    737560 c-act-t----------a-aatac---ttgcatgcaaa------t--att-a---t---a--------g
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              49622 30 -    317179 c-act-t----------a-aatac---ttgcatgtaaa------t--att-a---t---a--------g
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         9126 27 -    207569 ----a-g----------a-aatac---ttgcacgcaaa------tat---ta---t---a--------g
i Megaderma_lyra.MegLyr_scaffold_4542                    T 4271 I 4273
s Mellivora_capensis.MelCap_flattened_line_69365              8825 30 +     13704 c-atg-t----------g-cacat---ttgcatgcaaa------t--att-a---t---a--------g
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mico_argentatus.k141_1239457                                3605 30 -      7380 t-gca-t----------a-aatac---gtgcaggcaga------tat---tc---c---g--------g
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               2671 30 +     18990 t-gca-t----------a-aatac---gtgcaggcaga------tat---tc---c---g--------g
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      3610 30 -      7356 t-gca-t----------a-aatac---gtgcaggcaga------tat---tc---c---g--------g
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18289852 27 -  93316391 c-aca-t----------a-aatac---TTGCATGCGAA------T------A---T---G--------G
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    18104 22 -    145209 T-ACA-C----------T--ATAT---ATTACTCAAAA------A------------------------
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                14184 30 -     19307 c-aca-g----------a-aacac---ttgcatgccaa------t--gtt-a---c---a--------g
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miopithecus_ogouensis.k141_534055                           6878 29 -     28506 --aca-t----------a-aatac---ttgcatgcaaa------tat---ta---c---a--------g
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         4512 30 -      8324 c-tta-t----------a-cacac---ttgcatgcaaa------t--att-a---t---a--------g
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      7425 27 -     37649 c-aca-t----------a-aatac---ttgcatgtgac------t------a---t---g--------g
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140064 30 -    366855 c-aca-g----------a-aatac---ttgtttacaaa------a--att-a---t---a--------g
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   34220 30 +     37127 t-ata-t----------a-cacac---ttgcgtgcgaa------t--att-a---t---a--------c
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Mustela_putorius.JH418006.1                               300000 30 -  14710649 c-ata-t----------g-cacat---ttgcatgcaaa------t--att-a---t---a--------g
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187566 31 +    196477 c-aca-t----------a-aacac---ctgcacacaaa------tat-t-ta---t---a--------g
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nasalis_larvatus.k141_413338                               12874 29 +     21681 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9148303 17 -   9404916 c-ata-t----------a-catattgATTG---------------------------------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Ochotona_princeps.JH802162.1                             1361383 16 +   3988456 g-aca-t----------a-aacat---ttgaa-------------------------------------
i Ochotona_princeps.JH802162.1                           C 0 I 3
s Odobenus_rosmarus.KB229312.1                              505451 30 -   2017862 c-tta-a----------a-cacac---ttgcatgcaaa------t--att-a---t---a--------g
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67145167 16 + 174332312 g-aca-t----------a-aatat---ttgaa-------------------------------------
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 11
s Otocyon_megalotis.JAEUCK010005147.1                       461267 17 -    559221 c-ata-t----------a-catattgATTG---------------------------------------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Pan_paniscus.KQ411613.1                                    41814 23 +     80009 c-cCA-T----------A-AATAC---TTGCATGCAAA------T------------------------
i Pan_paniscus.KQ411613.1                                C 0 I 195
s Pan_troglodytes.CM009242.2                             189140726 30 + 189151597 c-cCA-T----------A-AATAC---TTGCATGCAAA------TAT---TA---C---A--------G
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  149972 30 +    230217 c-ata-t----------a-tacac---ttgcatgcaaa------t--att-a---t---a--------g
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                263180 29 +  18783137 c-ata-t----------a-tacac---ttgcatgcaaa------t--att-a---t---a---------
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4719815 30 -   8748460 c-ata-t----------a-tacac---ttgcatgcaaa------t--att-a---t---a--------g
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183440912 29 + 183742232 --ACA-T----------A-AATAC---TTGCATGCAGA------TAT---TA---C---A--------G
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             4605 29 +     20448 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20561411 29 +  20919399 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   3349 29 +     41871 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     6635 29 +     27711 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  6714 29 +      9205 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11431 30 -     78924 c-ata-t----------a-cacac---ttgtatccaaa------t--att-a---t---a--------g
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Piliocolobus_badius.k141_1234363                           41380 29 +     62158 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---t---g--------g
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        36110 29 +     89929 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---t---g--------g
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            37526 29 +     51399 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---t---g--------g
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14293764 29 -  14605196 --ACA-T----------A-AATAC---TTGCATGCAGA------TAT---TA---T---G--------G
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189128845 30 + 189387572 c-aca-t----------a-aatAC---TTGCATGCAAA------TAT---TA---C---A--------G
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9568453 30 +   9816681 c-aca-t----------a-aatac---ttgcatgcaaa------tat---ta---c---a--------g
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               71042 29 -     81375 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              2862 29 +     19060 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 11414 27 -     22811 ------t----------a-aaaac---ttgcatgtaag------tgt-t-ta---t---c--------t
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2595115 32 -   4620579 cttta-a----------a-aatac---tgg--tgcaaaaatgttt------a---t---a--------g
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     989106 27 +   2598838 c-aca-t----------a-aatac---TCACATGCAaa------t------a---t---a--------g
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          27416 27 +     38485 c-aca-t----------a-aatac---tcacatgcaaa------t------a---t---a--------g
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             3576 27 +      4256 c-aca-t----------a-aatac---tcacatgcaaa------t------a---t---a--------g
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          24929 27 +     35766 c-aca-t----------a-aatac---tcacatgcaaa------t------a---t---a--------g
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           3112 27 -     24134 c-aca-t----------a-aatac---tcacatgcaaa------t------a---t---a--------g
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        26933 27 -     67325 c-aca-t----------a-aatac---tcacatgcaaa------t------a---t---a--------g
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           3169 27 -      6182 c-aca-t----------a-aatac---tcacatgcaaa------t------a---t---a--------g
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            13480 30 -     21811 c-aca-g----------a-aacac---ttgcttacaaa------t--att-a---t---a--------g
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39017 30 +     42204 c-ata-t----------g-cacat---ttgcatgcaaa------t--att-a---t---a--------g
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22975567 30 +  28871421 c-aca-g----------a-tatac---ttgaatgtaaa------tac---ta---t---a--------g
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1358656 30 +   4952924 c-aca-g----------a-tatac---ttgaatgtaaa------tac---ta---t---a--------g
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20273091 30 -  38429054 c-ata-t----------a-tacac---ttgcatgcaaa------t--att-a---t---a--------g
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             12872 29 -     91421 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7606998 29 +   7812017 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             12846 29 -     72585 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             4553 29 -     11128 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91233908 29 - 195417433 --ACA-T----------A-AATAC---TTGCATGCAGA------TAT---TA---C---A--------G
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7669557 29 +   7961872 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                86578 30 -     96226 c-aca-g----------a-tatac---ttgaatgtaaa------tac---ta---t---a--------g
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               5732 30 -      8359 t-gca-t----------a-aatac---ttgcatgcgga------tat---tc---c---a--------g
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            12014 30 -     13588 t-gca-t----------a-aatac---ttgcatgcgga------tat---tc---c---a--------g
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              5676 13 -      6207 t-gct-g----------a-tattc---ca----------------------------------------
i Saguinus_imperator.k141_717981                         C 0 I 1
s Saguinus_inustus.k141_699149                               11403 13 +     13640 t-gca-g----------a-tattc---ca----------------------------------------
i Saguinus_inustus.k141_699149                           C 0 I 1
s Saguinus_labiatus.k141_285685                               6265 13 +      8564 t-gca-g----------a-tattc---ca----------------------------------------
i Saguinus_labiatus.k141_285685                          C 0 I 1
s Saguinus_midas.LG03                                    209466546 30 + 209938924 t-gca-t----------a-aatac---ttgcatgcgga------tat---tc---c---a--------g
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 5753 13 -      9399 t-gca-g----------a-tattc---ca----------------------------------------
i Saguinus_mystax.k141_374627                            C 0 I 1
s Saguinus_oedipus.k141_63850                                 2879 30 +      3421 t-gca-t----------a-aatac---ttgcatgcgga------tat---tc---c---a--------g
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119949082 30 - 121099817 T-GCA-T----------A-AATAC---TTGGATGCAGA------TAC---TC---T---A--------G
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       21536 30 +     46362 t-gca-t----------a-aatac---ttggatgcaga------tac---tc---t---a--------g
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               21631 30 +     45824 t-gca-t----------a-aatac---ttggatgcaga------tac---tc---t---a--------g
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             38259 30 -     64574 t-gca-t----------a-aatac---ttggatgcaga------tac---tc---t---a--------g
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               1265 30 -     23631 t-gca-t----------a-aatac---ttggatgcaga------tac---tc---t---a--------g
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 21524 30 -     61129 t-gca-t----------a-aatac---ttggatgcaga------tac---tc---t---a--------g
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    152458 22 -    313613 c-aca-taTTTGTGTACT-TGTAT---A-----------------------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 42 I 8
s Semnopithecus_entellus.k141_11662                          17380 29 -     19888 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      24583 29 +     39453 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            5109 29 +     27826 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             4629 29 -     19483 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      4691 29 +      7198 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         12951 29 +     15514 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               2554 35 +   1910179 C-ACA-TA--------TA-AATAT---ATACATGCAAA------AAA---TA---TTTTA--------T
i Solenodon_paradoxus.SolPar_flattened_line_126          I 16 C 0
s Sorex_araneus.JH798187.1                                13649611 25 -  18376816 -----------------A-ACTCA---TTGCATACAAA------TAT---GA---T---A--------G
i Sorex_araneus.JH798187.1                               I 2 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             29530 30 +     97271 c-ata-t----------a-tacat---ttgcatgcaaa------t--att-a---c---a--------g
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              17108 30 -    196729 t-ata-t----------a-cacac---ttgcatgcaaa------t--att-a---t---a--------c
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.JH118708.1                                      34311 27 -     47482 t-aca-g----------a-aatac---ttgcatgccaa------t------a---t---a--------g
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1091163 30 -   1523678 c-aca-t----------a-aatac---ttgcatgcaaa------tat---ta---c---a--------g
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 9420 30 +     41958 c-aca-g----------a-aatgc---ttgcatacaaa------tat---ta---t---a--------g
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 70918 31 +    116680 c-aca-t----------a-aacac---ctgcacacaaa------tat-t-ta---t---a--------g
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      117544 30 -    156842 c-aca-g----------a-aatat---ttgcatgcaga------t--att-a---c---a--------g
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    385997 30 +    539355 c-aca-g----------a-aatat---ttgcatgcaga------t--att-a---t---a--------g
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               24472 30 +     70052 c-aca-t----------a-aatac---ttgcctgcaaa------tat---ta---a---a--------g
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_2029956                               3812 30 +      4644 c-aca-t----------a-aatac---ttgcctgcaaa------tat---ta---a---a--------g
i Tarsius_wallacei.k141_2029956                          C 0 C 0
s Theropithecus_gelada.CM009954.1                        186426277 29 + 186847797 --ACG-T----------A-AATAC---TTGCATGCAGA------TAT---TA---C---A--------G
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   3486 31 +      8208 c-aca-t----------c-aacac---ctgcacacaaa------tat-t-ta---t---a--------g
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     79725 30 +    610378 c-aca-g----------g-aacac---tcgcatacaaa------t--aac-a---c---a--------g
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          8682 29 -     20410 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    12876 29 +     15221 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        8783 29 +     19930 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       5212 29 -     19997 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            45332 29 -     60166 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        12805 29 -     27529 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     12746 29 -     18194 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           6479 29 -     21137 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    5182 29 -     10723 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         4334 29 +      9834 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        22650 29 +     32220 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5936749 29 +   6242583 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        5997 29 +     20839 --aca-t----------a-aatac---ttgcatgcaga------tat---ta---c---a--------g
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2153508 30 +   4065304 c-ata-t----------a-actat---gcttgtacaaA------TAT---TG---T---A--------g
i Tupaia_chinensis.KB320699.1                            C 0 I 516
s Tupaia_tana.TupTan_flattened_line_97126                     7128 30 -     10553 c-ata-t----------a-cctat---gcttgtacaaa------tat---tg---t---a--------g
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 510
s Uropsilus_gracilis.UroGra_scaffold_12083                   52638 14 -     77625 c-aca-a------a--TT-TGTAT---A-----------------------------------------
i Uropsilus_gracilis.UroGra_scaffold_12083               I 44 I 8
s Ursus_maritimus.KK499267.1                               4849217 30 -   5085361 c-ata-t----------a-cgcac---ttgcatgcaaa------t--att-a---t---a--------g
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   9796 11 +     50397 --------------------------------tgcaaa------t------a---t---a--------g
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              9850 11 +     24756 --------------------------------tgcaaa------t------a---t---a--------g
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5370677 30 -   5488506 t-aca-g----------g-aatac---ttgcatgccattat---t------a---t---a--------g
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  9713 17 -     43706 c-ata-t----------a-catattgattg---------------------------------------
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          3945 30 +     86975 c-tta-t----------a-cacac---ttgcatgcaaa------t--att-a---t---a--------g
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Otolemur_garnettii.GL873799.1                             694317  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         2153  0 +      8798 C
e Galago_senegalensis.k141_631886                             2318  0 +     11339 C
e Galago_moholi.ctg2040                                     424611  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Chiropotes_albinasus.k141_2813271                           8451 841 +     11226 I
e Cebus_unicolor.k141_219506                                 14903  0 -     16904 I
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Mus_pahari.LT608297.1                                   31352818  0 -  89631738 C
e Mus_spretus.CM004101.1                                  90750234  0 - 130317789 C
e Mus_musculus.chr8                                       87648156  0 - 129401213 C
e Mus_caroli.LT608237.1                                   84359172  0 - 120012414 C
e Loris_tardigradus.ctg83                                  1002909  0 +   6120653 C
e Loris_lydekkerianus.k141_2539221                            4070  0 +     11245 C
e Perodicticus_potto.k141_1092580                             6662  0 +     25941 C
e Perodicticus_ibeanus.k141_855320                            8284  0 +     13100 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Xerus_inauris.XerIna_scaffold_48378                        22715  0 -     24430 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Spermophilus_dauricus.KZ294078.1                         1951468 299 -   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11304  0 -     12148 C
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rattus_norvegicus.chr16                                 53568239  0 +  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Psammomys_obesus.NESX01036370.1                             8401  0 -     21651 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18191985  0 -  18517816 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7577 1418 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    77382  0 +    102263 C
e Ondatra_zibethicus.OndZib_scaffold_46174                   22267 24 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105748257  0 + 199412804 C
e Nycticebus_coucang.k141_5327727                             5516  0 +      8486 C
e Nycticebus_bengalensis.LG01                            102577830  0 - 196305487 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11258701  7 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12180532  2 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 30759  0 +    140813 C
e Marmota_marmota.CZRN01000018.1                          33100580 298 -  40650429 I
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Ictidomys_tridecemlineatus.JH393364.1                    7518272 302 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Galagoides_demidoff.k141_1959596                            6126  0 +      6795 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Ellobius_talpinus.LOJH01109367.1                            3704  7 -      6299 I
e Ellobius_lutescens.LOEQ01008920.1                          17650  7 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089466 1162 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            62283 174 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    835315  0 +   1526836 C
e Cricetulus_griseus.LT883664.1                           11665468  2 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 48141  0 +     63868 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    136243  0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Arctocebus_calabarensis.k141_2318572                        9644  0 +     14667 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      10117 439 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     72139 576 -     89534 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     68454  0 +     87051 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       4494 11 +     62944 tgggtttattc
s Acinonyx_jubatus.LLWD01001279.1                           826123 10 -   1699592 cagctttctg-
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 1
s Ailuropoda_melanoleuca.LNAT01000098.1                    9509381 10 -  29979442 cagctttctg-
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 5
s Ailurus_fulgens.LNAC01001112.1                             78168 10 -    347723 cagctttctg-
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 1
s Allenopithecus_nigroviridis.k141_3361533                   12409 11 -     52922 tgggtttattc
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         12351 11 -     28001 tgggtttattc
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          2797 11 -     18505 tgggtttattc
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           3646 11 -     12518 tgggtttattc
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                              1207 11 -     27731 cagctttattc
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                1332 11 +      3134 cagctttattc
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               1467 11 -     45847 cagctttattc
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                22673 11 +     25266 cagctttattc
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           1857 11 +      2906 cagctttattc
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            15970 11 -     18578 caggtttattc
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              1357 11 +     47717 cagctttattc
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             1487 11 -      3544 cagctttattc
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             12707 11 +     50774 cagctttattc
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183894 10 +    412891 cagctatatt-
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 1
s Aotus_azarae.k141_3104676                                  13327 11 -     33861 cagctttattc
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            13347 11 -     34016 cagctttattc
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4295744 11 -   5030052 AAGCTTTATTC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             13349 11 -     34685 aagctttattc
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               26470 11 -     47192 aagctttattc
i Aotus_vociferans.k141_344750                           C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3306 10 +     43469 cagcttcact-
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 1
s Avahi_laniger.k141_765380                                  52079 11 -     92717 cagctttattg
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              52708 11 +     85213 cagctttattg
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             3089 11 -     10423 cagctttgttc
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             22589 11 +     31915 cagctttattc
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            3059 11 +      5267 cagctttattc
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23588273 11 - 189096842 CAGCTTTATTC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              9803 11 -     12001 cagctttattc
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10001220 10 -  17673402 cagctttatt-
i Camelus_bactrianus.KN276810.1                          C 0 I 1
s Camelus_dromedarius.KN272107.1                           2333678 10 -   7040546 cagctttatt-
i Camelus_dromedarius.KN272107.1                         C 0 I 1
s Camelus_ferus.KB017975.1                                  401960 10 -   1652518 cagctttatt-
i Camelus_ferus.KB017975.1                               C 0 I 1
s Carlito_syrichta.NW_007259797.1                           154380 11 -    496798 cagctttattt
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                3668 10 -     11696 cagctttatt-
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 1
s Catagonus_wagneri.CatWag_scaffold_2839                     91823 10 +    217609 catttctatg-
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 1
s Cebuella_niveiventris.k141_1251222                          7713 11 -     11392 cagctttattc
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               3811 11 -      7577 cagctttattc
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_olivaceus.k141_1000828                                1749 11 -      2944 cagctttattc
i Cebus_olivaceus.k141_1000828                           C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         3891 11 +     31688 cagctttattt
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12230251 10 +  27778364 cagttttatt-
i Ceratotherium_simum.JH767749.1                         C 0 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1278 10 -     25243 cagttttatt-
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 I 1
s Cercocebus_atys.KQ010504.1                               4473367 11 +   4669795 TGGgtttattc
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        11915 11 -     19203 tgggtttattc
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           6337 11 +      8260 tgggtttattc
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           6564 11 +     27781 tgggtttattc
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         6719 11 -     20310 tgggtttattc
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           9698 11 +     29689 tgggtttattc
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            4129 11 +      9989 tgggtttattc
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          12377 11 -     27936 tgggtttattc
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            1253 11 -     17152 tgggtttattc
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38814781 11 +  39242232 tgggtttattc
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21220482 11 -  21565898 tgggtttattc
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       37601 11 -     53127 tgggtttattc
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        4861 11 +      7159 tgggtttattc
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       12404 11 -     27947 tgggtttattc
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         12377 11 +     17596 tgggtttattc
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          1600 11 +     26000 tgggtttattc
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            6270 10 -      6351 aagctttatt-
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       C 0 I 1
s Cheirogaleus_major.k141_333249                             19487 11 -     52598 cagctttatag
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           14840 11 +     57038 cagctttatag
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chlorocebus_aethiops.ctg25                              18426348 11 -  18827391 tgggtttattc
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       12786 11 -     50209 tgggtttattc
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135419786 11 + 135778131 TGGgtttattc
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 16674 10 +     19366 cagctttatt-
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 I 1
s Choloepus_hoffmanni.KN194906.1                            171773 10 +    839153 cagctttatt-
i Choloepus_hoffmanni.KN194906.1                         C 0 I 1
s Chrysochloris_asiatica.ChrAsi_scaffold_2561901               297 10 -       464 caactttata-
i Chrysochloris_asiatica.ChrAsi_scaffold_2561901         C 0 I 1
s Colobus_angolensis.KN981557.1                            1908302 11 +   2368649 TGGatttattc
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199947978 11 + 200372422 tggatttattc
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              34840 11 +     84244 tggatttattc
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          12811 10 -     20389 cagctttatt-
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 1
s Crocidura_indochinensis.CroInd_scaffold_37019               1604 10 -     19598 CAGACTTCTT-
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 I 2
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27298 10 -     87169 cagctttctg-
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 1
s Daubentonia_madagascariensis.ctg71                      12535705 11 -  12879189 cagctttattc
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8628700 10 +  20541912 cagctttatt-
i Desmodus_rotundus.KZ672289.1                           C 0 I 1
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672102 10 +   1390856 cggttttatt-
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 1
s Diceros_bicornis.DicBicMic_scaffold_5955                    4854 10 +    198055 cagttttatt-
i Diceros_bicornis.DicBicMic_scaffold_5955               I 2 I 1
s Eidolon_helvum.KE759718.1                                   9334 10 +     11740 cagctttatt-
i Eidolon_helvum.KE759718.1                              C 0 I 1
s Enhydra_lutris.KZ291758.1                               16328137 10 -  41312741 cagctttctg-
i Enhydra_lutris.KZ291758.1                              C 0 I 1
s Equus_asinus.JREZ01000139.1                              1282163 10 +   4378816 cagctttatt-
i Equus_asinus.JREZ01000139.1                            C 0 I 1
s Equus_caballus.CM000403.2                               18529984 10 -  39960074 cagctttatt-
i Equus_caballus.CM000403.2                              C 0 I 1
s Equus_przewalskii.KK951119.1                               31999 10 +    498745 cagctttatt-
i Equus_przewalskii.KK951119.1                           C 0 I 1
s Erythrocebus_patas.Contig38                             21202976 11 -  21539334 tgggtttattc
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              12187 11 -     14127 cagctttattg
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                4885 11 -     16928 cagctttattg
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              13922 11 -     25546 cagctttattg
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            11112 11 +     26330 cagctttattg
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 12351 11 +     23973 cagctttattg
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                11112 11 +     75513 cagctttattg
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  9054 11 +     97555 cagctttattg
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            11990 11 +     26496 cagttttattg
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  2587 11 -     17153 cagctttattg
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              12163 11 +    111500 cagctttattg
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20235992 10 + 206538554 cagctttctg-
i Felis_catus.CM001381.2                                 C 0 I 1
s Felis_catus_fca126.CM031415.1                           20194835 10 + 205367284 cagctttctg-
i Felis_catus_fca126.CM031415.1                          C 0 I 1
s Felis_nigripes.FelNig_flattened_line_20823                  8349 10 -     36744 cagctttctg-
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 1
s Galeopterus_variegatus.GalVar_scaffold_197845               2443 10 -      3123 cagctttact-
i Galeopterus_variegatus.GalVar_scaffold_197845          I 100 C 0
s Gorilla_beringei.k141_3596273                              13747 11 -     32273 tgggtttattc
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186335895 11 + 186649187 tgggtttattc
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           5241 11 -     19426 cagctttattg
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             10390 11 -     15286 cagctttattg
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             12029 11 +     18253 cagctttattg
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         12130 11 -     41752 cagctttattg
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         11968 11 -     16460 cagctttattg
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               241138 10 +    327341 tagctttctg-
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 1
s Heterohyrax_brucei.HetBruBak_scaffold_403422                 448 10 -       893 cagctttatt-
i Heterohyrax_brucei.HetBruBak_scaffold_403422           C 0 I 1
s Hipposideros_armiger.JXIK01000431.1                       110606 10 +   1711038 cagctttatt-
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 1
s Hipposideros_galeritus.HipGal_scaffold_29171               42032 10 +     43066 cagctttatt-
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 I 1
s Hoolock_leuconedys.ctg274                                    432558 11 +    630532 tgggtttattc
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  43275 10 +     55795 cagctttctg-
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 1
s Hylobates_agilis.k141_232023                                 324 11 -     12752 tgggtttattc
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                                368 11 +     14092 tgggtttattc
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189541151 11 - 191637585 tgggtttattc
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3334045 11 -  11177569 tgggtttattc
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_3655594                                   20931 11 +     31101 cagctttatta
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15522476 11 -  30322482 cagctttattg
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        5433 11 +     64341 cagctttattc
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           2494 11 +      4941 cagctttattc
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        5362 11 +     35603 cagctttattc
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    26849 11 +     38576 cagctttatcc
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         23546 11 +     66356 cagctttaccc
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          9373 11 -     23766 cagctttattg
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             27438 11 +     45836 cagctttattg
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_667017                          1976 11 -      2151 cagctttattg
i Lepilemur_ruficaudatus.k141_667017                     C 0 I 32
s Lepilemur_septentrionalis.k141_185316                      25374 11 +     54090 cagctttattg
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3041674 10 +   3914936 cagctttctg-
i Leptonychotes_weddellii.KB714746.1                     C 0 I 1
s Lepus_americanus.LepAme_scaffold_107385                     4349 10 -     14121 cagatttatt-
i Lepus_americanus.LepAme_scaffold_107385                I 11 C 0
s Lophocebus_aterrimus.ctg367                              1434913 11 +   1826925 tgggtttattc
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                            4215790 10 -  43346337 caactttttt-
i Loxodonta_africana.GL010049.1                          C 0 I 1
s Macaca_arctoides.k141_2326796                               4726 11 +     40492 tgggtttattc
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59673988 11 +  60120075 tgggtttattc
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 10482 11 -     26193 tgggtttattc
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            78286 11 -    114318 tgggtttattc
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  3985 11 -     23192 tgggtttattc
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                13445 11 -     29190 tgggtttattc
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  22013 11 +     37952 tgggtttattc
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186837101 11 + 187317192 TGGGTTTATTC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25455664 11 -  25927173 TGGGTTTATTC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  77862 11 +     89720 tgggtttattc
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 4859 11 +     20474 tgggtttattc
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   4659 11 -     14993 tgggtttattc
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  327531 11 -    668171 tgggtttattc
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 2971 11 -     24072 tgggtttattc
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               23600 11 -     45290 tgggtttattc
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 89427 10 +     94391 tagctttatt-
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 1
s Mandrillus_leucophaeus.scaffold280                      23935187 11 -  24302211 tgggtttattc
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               349320 11 +    752769 tgggtttattc
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              18268 10 +    737560 tggctttctg-
i Manis_javanica.JSZB01003497.1                          C 0 I 1
s Manis_pentadactyla.KN006162.1                              49652 10 -    317179 tggccttctg-
i Manis_pentadactyla.KN006162.1                          C 0 I 1
s Megaderma_lyra.MegLyr_scaffold_4542                        13426 10 -    207569 cagcactatt-
i Megaderma_lyra.MegLyr_scaffold_4542                    I 4273 T 4272
s Mellivora_capensis.MelCap_flattened_line_69365              8855 10 +     13704 cagctttctg-
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 1
s Mico_argentatus.k141_1239457                                3635 11 -      7380 cagctttattc
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               2701 11 +     18990 cagctttattc
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      3640 11 -      7356 cagctttattc
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18289879 11 -  93316391 CAGCTTTATag
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                14214 10 -     19307 cagctttatt-
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 1
s Miopithecus_ogouensis.k141_534055                           6907 11 -     28506 tgggtttattc
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         4542 10 -      8324 cagcctcctg-
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 1
s Mirza_zaza.k141_952172                                      7452 11 -     37649 cagctttatag
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140094 10 -    366855 cagctttata-
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 33
s Mungos_mungo.MunMun_flattened_line_23663                   34250 10 +     37127 cagctttctg-
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 1
s Mustela_putorius.JH418006.1                               300030 10 -  14710649 cagttttctg-
i Mustela_putorius.JH418006.1                            C 0 I 1
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187597 10 +    196477 cagctttgtt-
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 I 1
s Nasalis_larvatus.k141_413338                               12903 11 +     21681 tggatttattc
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Ochotona_princeps.JH802162.1                             1361402 10 +   3988456 cagatttatt-
i Ochotona_princeps.JH802162.1                           I 3 C 0
s Odobenus_rosmarus.KB229312.1                              505481 10 -   2017862 catctttctg-
i Odobenus_rosmarus.KB229312.1                           C 0 I 1
s Oryctolagus_cuniculus.CM000791.1                        67145194 10 + 174332312 cagatttatt-
i Oryctolagus_cuniculus.CM000791.1                       I 11 C 0
s Pan_troglodytes.CM009242.2                             189140756 11 + 189151597 TGGGTTTATTC
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  150002 10 +    230217 cagctttctg-
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 1
s Panthera_pardus.KV860321.1                                263209  8 +  18783137 --gctttctg-
i Panthera_pardus.KV860321.1                             C 0 I 1
s Panthera_tigris.KE722367.1                               4719845 10 -   8748460 cagctttctg-
i Panthera_tigris.KE722367.1                             C 0 I 1
s Papio_anubis.CM001495.2                                183440941 11 + 183742232 TGGgtttattc
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             4634 11 +     20448 tgggtttattc
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20561440 11 +  20919399 tgggtttattc
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   3378 11 +     41871 tgggtttattc
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     6664 11 +     27711 tgggtttattc
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  6743 11 +      9205 tgggtttattc
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11461 10 -     78924 cagctttctg-
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 1
s Piliocolobus_badius.k141_1234363                           41409 11 +     62158 tggatttattc
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        36139 11 +     89929 tggatttattc
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            37555 11 +     51399 tggatttattc
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14293793 11 -  14605196 TGGatttattc
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189128875 11 + 189387572 TGGGTTTATTC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9568483 11 +   9816681 tgggtttattc
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               71071 11 -     81375 tggatttattc
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              2891 11 +     19060 tggatttattc
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 11441 10 -     22811 cagctttatt-
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 I 1
s Prolemur_simus.MPIZ01000396.1                            2595147 11 -   4620579 cagctttattt
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     989133 11 +   2598838 cagctttattg
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          27443 11 +     38485 cagctttattg
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             3603 11 +      4256 cagctttattg
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          24956 11 +     35766 cagctttattg
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           3139 11 -     24134 cagctttattg
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        26960 11 -     67325 cagctttaatg
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           3196 11 -      6182 cagctttattg
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            13510 10 -     21811 cagatttata-
i Pteronotus_parnellii.KE909381.1                        C 0 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39047 10 +     42204 cagctttctg-
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 1
s Pteropus_alecto.KB030862.1                              22975597 10 +  28871421 cagctttatt-
i Pteropus_alecto.KB030862.1                             C 0 I 1
s Pteropus_vampyrus.KN525825.1                             1358686 10 +   4952924 cagctttatt-
i Pteropus_vampyrus.KN525825.1                           C 0 I 1
s Puma_concolor.QAVW01001104.1                            20273121 10 -  38429054 cagctttctg-
i Puma_concolor.QAVW01001104.1                           C 0 I 1
s Pygathrix_cinerea.k141_1153803                             12901 11 -     91421 tggatttattc
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7607027 11 +   7812017 tggatttattc
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             12875 11 -     72585 tggatttattc
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             4582 11 -     11128 tggatttattc
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91233937 11 - 195417433 TGGatttattc
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7669586 11 +   7961872 tggatttattc
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                86608 10 -     96226 cacctttatt-
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 1
s Saguinus_bicolor.k141_2619299                               5762  3 -      8359 cag--------
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            12044  3 -     13588 cag--------
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              5690 11 -      6207 cagccttattc
i Saguinus_imperator.k141_717981                         I 1 C 0
s Saguinus_inustus.k141_699149                               11417 11 +     13640 cagctttattc
i Saguinus_inustus.k141_699149                           I 1 C 0
s Saguinus_labiatus.k141_285685                               6279 11 +      8564 cagctttattc
i Saguinus_labiatus.k141_285685                          I 1 C 0
s Saguinus_midas.LG03                                    209466576  3 + 209938924 cag--------
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 5767 11 -      9399 cagctttattc
i Saguinus_mystax.k141_374627                            I 1 C 0
s Saguinus_oedipus.k141_63850                                 2909  3 +      3421 cag--------
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119949112 11 - 121099817 CAGCTTTATTC
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       21566 11 +     46362 cagctttattc
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               21661 11 +     45824 cagctttattc
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             38289 11 -     64574 cagctttattc
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               1295 11 -     23631 cagctttattc
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 21554 11 -     61129 cagctttattc
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          17409 11 -     19888 tggatttattc
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      24612 11 +     39453 tggatttattc
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            5138 11 +     27826 tggatttattc
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             4658 11 -     19483 tggatttattc
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      4720 11 +      7198 tggatttattc
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         12980 11 +     15514 tggatttattc
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               2589 10 +   1910179 CTGCTTTCTA-
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 1
s Sorex_araneus.JH798187.1                                13649636 10 -  18376816 CAGCCTTTGT-
i Sorex_araneus.JH798187.1                               C 0 I 4
s Spilogale_gracilis.SpiGra_flattened_line_13525             29560 10 +     97271 cagcgttctg-
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 1
s Suricata_suricatta.SurSur_flattened_line_6629              17138 10 -    196729 cagctttctg-
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 1
s Sus_scrofa.JH118708.1                                      34338 10 -     47482 catttctatc-
i Sus_scrofa.JH118708.1                                  C 0 I 1
s Symphalangus_syndactylus.tarseq_199                      1091193 11 -   1523678 tgggtttattc
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 9450 10 +     41958 cagctttatt-
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 1
s Tamandua_tetradactyla.TamTet_scaffold_1782                 70949 10 +    116680 cagctttatt-
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 I 1
s Tapirus_indicus.TapInd_scaffold_9301                      117574 10 -    156842 cagctttatt-
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 1
s Tapirus_terrestris.TapTer_scaffold_755                    386027 10 +    539355 tagctttatt-
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 1
s Tarsius_lariang.k141_2201908                               24502 11 +     70052 cagctttattt
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_2029956                               3842 11 +      4644 cagctttattt
i Tarsius_wallacei.k141_2029956                          C 0 C 0
s Theropithecus_gelada.CM009954.1                        186426306 11 + 186847797 TGGgtttattc
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   3517 10 +      8208 aagctttatt-
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 I 1
s Tonatia_saurophila.TonSau_scaffold_294                     79755 10 +    610378 cagctttatt-
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 1
s Trachypithecus_auratus.k141_722599                          8711 11 -     20410 tggatttattc
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    12905 11 +     15221 tggatttattc
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        8812 11 +     19930 tggatttattc
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       5241 11 -     19997 tggatttattc
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            45361 11 -     60166 tggatttattc
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        12834 11 -     27529 tggatttattc
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     12775 11 -     18194 tggatttattc
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           6508 11 -     21137 tggatttattc
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    5211 11 -     10723 tggatttattc
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         4363 11 +      9834 tggatttattc
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        22679 11 +     32220 tggatttattc
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5936778 11 +   6242583 tggatttattc
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        6026 11 +     20839 tggatttattc
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2154054 10 +   4065304 caccttaact-
i Tupaia_chinensis.KB320699.1                            I 516 I 3
s Tupaia_tana.TupTan_flattened_line_97126                     7668 10 -     10553 caccttaacc-
i Tupaia_tana.TupTan_flattened_line_97126                I 510 I 46
s Ursus_maritimus.KK499267.1                               4849247 10 -   5085361 cagctttctg-
i Ursus_maritimus.KK499267.1                             C 0 I 5
s Varecia_rubra.k141_590885                                   9807 11 +     50397 cagctttattg
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              9861 11 +     24756 cagctttattg
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5370707 10 -   5488506 cagcttcatt-
i Vicugna_pacos.KN270157.1                               C 0 I 1
s Zalophus_californianus.ZalCal_flattened_line_17732          3975 10 +     86975 catctttctg-
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 1
e Echinops_telfairi.JH980293.1                            48778276  0 + 111700974 C
e Otolemur_garnettii.GL873799.1                             694317  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         2153  0 +      8798 C
e Galago_senegalensis.k141_631886                             2318  0 +     11339 C
e Galago_moholi.ctg2040                                     424611  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Chiropotes_albinasus.k141_2813271                           8451 841 +     11226 I
e Cebus_unicolor.k141_219506                                 14903  0 -     16904 I
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Mus_pahari.LT608297.1                                   31352818  0 -  89631738 C
e Mus_spretus.CM004101.1                                  90750234  0 - 130317789 C
e Mus_musculus.chr8                                       87648156  0 - 129401213 C
e Mus_caroli.LT608237.1                                   84359172  0 - 120012414 C
e Loris_tardigradus.ctg83                                  1002909  0 +   6120653 C
e Loris_lydekkerianus.k141_2539221                            4070  0 +     11245 C
e Perodicticus_potto.k141_1092580                             6662  0 +     25941 C
e Perodicticus_ibeanus.k141_855320                            8284  0 +     13100 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Xerus_inauris.XerIna_scaffold_48378                        22715  0 -     24430 C
e Vulpes_lagopus.VulLag_flattened_line_30954                  9730  0 -     43706 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   52652  8 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Spermophilus_dauricus.KZ294078.1                         1951468 299 -   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11304  0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152480  8 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rattus_norvegicus.chr16                                 53568239  0 +  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Psammomys_obesus.NESX01036370.1                             8401  0 -     21651 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18191985  0 -  18517816 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Pan_paniscus.KQ411613.1                                    41837 195 +     80009 I
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       461284  0 -    559221 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7577 1418 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    77382  0 +    102263 C
e Ondatra_zibethicus.OndZib_scaffold_46174                   22267 24 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105748257  0 + 199412804 C
e Nycticebus_coucang.k141_5327727                             5516  0 +      8486 C
e Nycticebus_bengalensis.LG01                            102577830  0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9148320  0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11258701  7 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    18126  0 -    145209 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12180532  2 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 30759  0 +    140813 C
e Marmota_marmota.CZRN01000018.1                          33100580 298 -  40650429 I
e Lycaon_pictus.CM007581.1                                17954062  0 -  59628241 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Ictidomys_tridecemlineatus.JH393364.1                    7518272 302 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Galagoides_demidoff.k141_1959596                            6126  0 +      6795 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Ellobius_talpinus.LOJH01109367.1                            3704  7 -      6299 I
e Ellobius_lutescens.LOEQ01008920.1                          17650  7 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089466 1162 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            62283 174 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    835315  0 +   1526836 C
e Cricetulus_griseus.LT883664.1                           11665468  2 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 48141  0 +     63868 C
e Condylura_cristata.JH655891.1                           17547413  8 -  53390261 I
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    136243  0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18499334  0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17957822  0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9033557  0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    184171  0 -    185531 C
e CanFam4.chr16                                           17798114  0 -  60362399 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Arctocebus_calabarensis.k141_2318572                        9644  0 +     14667 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      10117 439 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     72139 576 -     89534 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     68454  0 +     87051 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       4505 25 +     62944 ac-ac-tagccaaaaac------------t---g-g---a----g---g-aaaA
s Acinonyx_jubatus.LLWD01001279.1                           826134 17 -   1699592 at-aa-tcaccaa-aa-------------t---g-g---g--------------
i Acinonyx_jubatus.LLWD01001279.1                        I 1 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9509396 17 -  29979442 at-aa-tcaccaa-aa-------------t---g-g---g--------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 5 C 0
s Ailurus_fulgens.LNAC01001112.1                             78179 17 -    347723 at-aa-ccaccaa-aa-------------c---a-g---g--------------
i Ailurus_fulgens.LNAC01001112.1                         I 1 C 0
s Allenopithecus_nigroviridis.k141_3361533                   12420 25 -     52922 ac-ag-tagccaaagcc------------t---t-g---a----g---g-aaaa
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         12362 25 -     28001 ac-ag-tagccaaagcc------------t---t-g---a----g---g-aaaa
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          2808 25 -     18505 ac-ag-tagccaaagcc------------t---t-g---a----g---g-aaaa
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           3657 25 -     12518 ac-ag-tagccaaagcc------------t---t-g---a----g---g-aaaa
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                              1218 25 -     27731 tc-ag-tagcccaaaac------------t---g-g---a----g---g-aaaa
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                1343 25 +      3134 tc-ag-tagcccaaaac------------t---g-g---a----g---g-aaaa
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               1478 25 -     45847 tc-ag-tagcccaaaac------------t---g-g---a----g---g-aaaa
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                22684 25 +     25266 tc-ag-tagcccaaaac------------t---g-g---a----g---g-aaaa
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           1868 25 +      2906 tc-ag-tagcccaaaac------------t---g-g---a----g---g-aaaa
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            15981 25 -     18578 tc-ag-tagcccaaaac------------t---g-g---a----g---g-aaaa
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              1368 25 +     47717 tc-ag-tagcccaaaac------------t---g-g---a----g---g-aaaa
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             1498 25 -      3544 tc-ag-tagcccaaaac------------t---g-g---a----g---g-aaaa
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             12718 25 +     50774 tc-ag-tagcccaaaac------------t---g-g---a----g---g-aaaa
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183905 21 +    412891 aa-aa-tagtcaagaac------------t---t-gga-a--------------
i Anoura_caudifer.AnoCau_scaffold_1412                   I 1 C 0
s Aotus_azarae.k141_3104676                                  13338 25 -     33861 tc-ag-tagcccaaaac------------t---g-g---a----a---g-aaaa
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            13358 25 -     34016 tc-ag-tagcccaaaac------------t---g-g---a----g---g-aaaa
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4295755 25 -   5030052 TC-AG-TAGCCCAAAac------------t---g-g---a----g---g-aaaa
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             13360 25 -     34685 tc-ag-tagcccaaaag------------t---g-g---a----g---g-aaaa
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               26481 25 -     47192 tc-ag-tagcccaaaag------------t---g-g---a----g---g-aaaa
i Aotus_vociferans.k141_344750                           C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3317 21 +     43469 aa-aa-tagccaagaac------------t---t-gga-a--------------
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 1 C 0
s Avahi_laniger.k141_765380                                  52090 28 -     92717 at-aa-tagccaaaacc------------t---g-g---gg-gtg---g-gagg
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              52719 28 +     85213 at-aa-tagccaaaacc------------t---g-g---gg-gtg---g-gagg
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             3100 25 -     10423 tc-ag-tagcccataac------------t---g-g---a----g---g-gaaa
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             22600 25 +     31915 tc-ag-tagcccaaaac------------c---a-g---a----g---g-aaaa
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            3070 25 +      5267 tc-ag-tagcccaaaac------------t---g-g---a----g---g-gaaa
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23588284 25 - 189096842 TC-AG-TAGCCCAAAAC------------T---G-G---A----G---G-GAAA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              9814 25 -     12001 tc-ag-tagcccaaaac------------t---g-g---a----g---g-gaaa
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10001231 25 -  17673402 gt-aa-tagccaagaactgg------aact---a-g---a--------------
i Camelus_bactrianus.KN276810.1                          I 1 C 0
s Camelus_dromedarius.KN272107.1                           2333689 25 -   7040546 gt-aa-tagccaagaactgg------aact---a-g---a--------------
i Camelus_dromedarius.KN272107.1                         I 1 C 0
s Camelus_ferus.KB017975.1                                  401971 25 -   1652518 gt-aa-tagccaagaactgg------aact---a-g---a--------------
i Camelus_ferus.KB017975.1                               I 1 C 0
s Carlito_syrichta.NW_007259797.1                           154391 19 -    496798 ac-aa-C------AAGc------------t---g-g---a----g---g-aaaa
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                3679 21 -     11696 aa-aa-gagccaagaac------------t---t-gga-a--------------
i Carollia_perspicillata.CarPer_scaffold_92756           I 1 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     91834 19 +    217609 at-ac-cagctaagaac------------t---a-a---a--------------
i Catagonus_wagneri.CatWag_scaffold_2839                 I 1 C 0
s Cebuella_niveiventris.k141_1251222                          7724 25 -     11392 tc-ag-tagcccaaaac------------t---g-g---a----g---g-gaaa
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               3822 25 -      7577 tc-ag-tagcccaaaac------------t---g-g---a----g---g-gaaa
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_olivaceus.k141_1000828                                1760 25 -      2944 tc-ag-tagcccaaaac------------t---g-g---a----g---a-aaaa
i Cebus_olivaceus.k141_1000828                           C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         3902 19 +     31688 ac-aa-c------aagc------------t---g-g---a----g---g-aaaa
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12230262 19 +  27778364 at-aa-tagccaagaac------------t---a-g---g--------------
i Ceratotherium_simum.JH767749.1                         I 1 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1289 19 -     25243 at-aa-tagccaagaac------------t---a-g---g--------------
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 1 C 0
s Cercocebus_atys.KQ010504.1                               4473378 24 +   4669795 ac-ag-tagccaaagcc------------t---t-g---a----g---g-ga-a
i Cercocebus_atys.KQ010504.1                             C 0 I 1
s Cercocebus_chrysogaster.k141_393940                        11926 24 -     19203 ac-ag-tagccaaagcc------------t---t-g---a----g---g-ga-a
i Cercocebus_chrysogaster.k141_393940                    C 0 I 1
s Cercocebus_lunulatus.k141_3846941                           6348 24 +      8260 ac-ag-tagccaaagcc------------t---t-g---a----g---g-ga-a
i Cercocebus_lunulatus.k141_3846941                      C 0 I 1
s Cercocebus_torquatus.k141_3057011                           6575 24 +     27781 ac-ag-tagccaaagcc------------t---t-g---a----g---g-ga-a
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         6730 25 -     20310 ac-ag-tagccaaagcc------------t---t-g---a----g---g-aaaa
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           9709 25 +     29689 ac-ag-tagccaaagcc------------t---t-g---a----g---g-aaaa
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            4140 25 +      9989 ac-ag-tagccaaaaac------------t---t-g---a----g---g-aaaa
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          12388 25 -     27936 ac-ag-tagccaaagcc------------t---t-g---a----g---g-aaaa
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            1264 25 -     17152 ac-ag-tagccaaagcc------------t---t-g---a----g---g-aaaa
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38814792 25 +  39242232 ac-ag-tagccaaagcc------------t---t-g---a----g---g-aaaa
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21220493 25 -  21565898 ac-ag-tagccaaagcc------------t---t-g---a----g---g-aaaa
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       37612 25 -     53127 ac-ag-tagccaaagcc------------t---t-g---a----g---g-aaaa
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        4872 25 +      7159 ac-ag-tagccaaagcc------------t---t-g---a----g---g-aaaa
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       12415 25 -     27947 ac-ag-tagccaaagcc------------t---t-g---a----g---g-aaaa
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         12388 25 +     17596 ac-ag-tagccaaagcc------------t---t-g---a----g---g-aaaa
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          1611 25 +     26000 ac-ag-tagccaaagcc------------t---t-g---a----g---g-aaaa
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            6281 17 -      6351 at-aa-tagccaaaaat------------t---g--------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       I 1 I 3
s Cheirogaleus_major.k141_333249                             19498 29 -     52598 at-aa-tagccaaaaac------------t---g-g---gg-gcg---gggggg
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           14851 27 +     57038 at-aa-tagccaaaaac------------t---g-a---gg-gcg---gggg--
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chlorocebus_aethiops.ctg25                              18426359 25 -  18827391 ac-ag-tagccaaagcc------------t---t-g---a----g---g-aaaa
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       12797 25 -     50209 ac-ag-tagccaaagcc------------t---t-g---a----g---g-aaaa
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135419797 25 + 135778131 ac-ag-tagccaaagcc------------t---t-g---a----g---g-aaaa
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 16685 21 +     19366 gt-aa-tagtcaaaagt------------t---g-t---g----a---a-----
i Choloepus_didactylus.ChoDid_scaffold_45914             I 1 C 0
s Choloepus_hoffmanni.KN194906.1                            171784 21 +    839153 gt-aa-tagtcaaaagt------------t---g-t---g----a---a-----
i Choloepus_hoffmanni.KN194906.1                         I 1 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_2561901               308 25 -       464 at-aa-tagccaaaaac------------ttcag-t---gg---g---g-----
i Chrysochloris_asiatica.ChrAsi_scaffold_2561901         I 1 C 0
s Colobus_angolensis.KN981557.1                            1908313 25 +   2368649 ac-ag-tagccaaaaac------------t---t-g---a----g---g-aaaa
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199947989 25 + 200372422 ac-ag-tagccaaaaac------------t---t-g---a----g---g-aaaa
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              34851 25 +     84244 ac-ag-tagccaaaaac------------t---t-g---a----g---g-aaaa
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          12822 19 -     20389 at-ag-tagccgaggac------------t---a-g---g--------------
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 1 I 7
s Crocidura_indochinensis.CroInd_scaffold_37019               1616 14 -     19598 ------TAGTCAAA-AA------------T---A-G---G--------------
i Crocidura_indochinensis.CroInd_scaffold_37019          I 2 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27309 17 -     87169 at-aa-tcaccga-aa-------------t---g-g---g--------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 1 C 0
s Daubentonia_madagascariensis.ctg71                      12535716 25 -  12879189 at-aa-tagccaaaaac------------t---g-g---g----g---g-ggat
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8628711 21 +  20541912 aa-ag-tagccaagaac------------t---t-gga-g--------------
i Desmodus_rotundus.KZ672289.1                           I 1 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672113 18 +   1390856 at-aa-tagccaagaac------------t---a-g------------------
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 1 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    4865 19 +    198055 at-aa-tagccaagaac------------t---a-g---g--------------
i Diceros_bicornis.DicBicMic_scaffold_5955               I 1 C 0
s Eidolon_helvum.KE759718.1                                   9345 19 +     11740 at-aa-tacccaagaac------------t---a-g---g--------------
i Eidolon_helvum.KE759718.1                              I 1 C 0
s Enhydra_lutris.KZ291758.1                               16328148 17 -  41312741 at-aa-tcaccaa-aa-------------t---g-g---g--------------
i Enhydra_lutris.KZ291758.1                              I 1 I 1
s Equus_asinus.JREZ01000139.1                              1282174 19 +   4378816 ac-aa-tagccaggaac------------t---a-t---g--------------
i Equus_asinus.JREZ01000139.1                            I 1 C 0
s Equus_caballus.CM000403.2                               18529995 19 -  39960074 ac-aa-tagccaggaac------------t---a-t---g--------------
i Equus_caballus.CM000403.2                              I 1 C 0
s Equus_przewalskii.KK951119.1                               32010 19 +    498745 ac-aa-tagccaggaac------------t---a-t---g--------------
i Equus_przewalskii.KK951119.1                           I 1 C 0
s Erythrocebus_patas.Contig38                             21202987 25 -  21539334 ac-ag-tagccaaagcc------------t---t-g---a----g---g-aaaa
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              12198 20 -     14127 at-aa-tagccaaaaac------------t---g-g---g----g---------
i Eulemur_albifrons.k141_342033                          C 0 I 4
s Eulemur_collaris.k141_377015                                4896 20 -     16928 at-aa-tagccaaaaac------------t---g-g---g----g---------
i Eulemur_collaris.k141_377015                           C 0 I 4
s Eulemur_coronatus.k141_885031                              13933 20 -     25546 at-aa-tagccaaaaac------------t---g-g---g----g---------
i Eulemur_coronatus.k141_885031                          C 0 I 4
s Eulemur_flavifrons.k141_1184614                            11123 20 +     26330 at-aa-tagccaaaaac------------t---g-g---g----g---------
i Eulemur_flavifrons.k141_1184614                        C 0 I 4
s Eulemur_fulvus.k141_544389                                 12362 20 +     23973 at-aa-tagccaaaaac------------t---g-g---g----g---------
i Eulemur_fulvus.k141_544389                             C 0 I 4
s Eulemur_macaco.k141_1562045                                11123 20 +     75513 at-aa-tagccaaaaac------------t---g-g---g----g---------
i Eulemur_macaco.k141_1562045                            C 0 I 4
s Eulemur_mongoz.k141_232305                                  9065 20 +     97555 at-aa-tagccaaaaac------------t---a-g---g----g---------
i Eulemur_mongoz.k141_232305                             C 0 I 4
s Eulemur_rubriventer.k141_571033                            12001 20 +     26496 at-aa-tagccaaaaac------------t---g-g---g----g---------
i Eulemur_rubriventer.k141_571033                        C 0 I 4
s Eulemur_rufus.k141_1476633                                  2598 20 -     17153 at-aa-tagccaaaaac------------t---g-g---g----g---------
i Eulemur_rufus.k141_1476633                             C 0 I 4
s Eulemur_sanfordi.k141_1122526                              12174 20 +    111500 at-aa-tagccaaaaac------------t---g-g---g----g---------
i Eulemur_sanfordi.k141_1122526                          C 0 I 4
s Felis_catus.CM001381.2                                  20236003 17 + 206538554 at-aa-tcaccaa-aa-------------t---g-g---g--------------
i Felis_catus.CM001381.2                                 I 1 C 0
s Felis_catus_fca126.CM031415.1                           20194846 17 + 205367284 at-aa-tcaccaa-aa-------------t---g-g---g--------------
i Felis_catus_fca126.CM031415.1                          I 1 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  8360 17 -     36744 at-aa-tcaccaa-aa-------------t---g-g---g--------------
i Felis_nigripes.FelNig_flattened_line_20823             I 1 C 0
s Galeopterus_variegatus.GalVar_scaffold_197845               2453 21 -      3123 aa-aa-ttgccaaaaac------------t---a-g---g----a---g-----
i Galeopterus_variegatus.GalVar_scaffold_197845          C 0 C 0
s Gorilla_beringei.k141_3596273                              13758 25 -     32273 ac-ac-tagccaaaaac------------t---g-g---a----g---g-aaaa
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186335906 25 + 186649187 ac-ac-tagccaaaaac------------t---g-g---a----g---g-aaaa
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           5252 26 -     19426 at-aa-tagccaaaaac------------t---a-g---g----gggcg---gg
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             10401 26 -     15286 at-aa-tagccaaaaac------------t---g-g---g----gggtg---gg
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             12040 26 +     18253 at-aa-tagccaaaaac------------t---a-g---g----gggcg---gg
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         12141 26 -     41752 at-aa-tagccaaaaac------------t---a-g---g----gggcg---gg
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         11979 26 -     16460 at-aa-tagccaaaaac------------t---a-g---g----gggcg---gg
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               241149 17 +    327341 at-aa-tcaccaa-aa-------------t---g-g---g--------------
i Helogale_parvula.HelPar_flattened_line_2585            I 1 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_403422                 459 22 -       893 at-aaatagccaaaaac------------t---g-t---g----g---a-----
i Heterohyrax_brucei.HetBruBak_scaffold_403422           I 1 C 0
s Hipposideros_armiger.JXIK01000431.1                       110617 19 +   1711038 at-aa-tagccatggat------------t---a-g---g--------------
i Hipposideros_armiger.JXIK01000431.1                    I 1 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               42043 19 +     43066 at-aa-tagccattgat------------t---a-g---a--------------
i Hipposideros_galeritus.HipGal_scaffold_29171           I 1 C 0
s Hoolock_leuconedys.ctg274                                    432569 25 +    630532 ac-tg-tagccaaaaac------------t---g-g---g----g---g-aaaa
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  43286 17 +     55795 at-aa-tcaccaa-aa-------------t---g-a---g--------------
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 1 C 0
s Hylobates_agilis.k141_232023                                 335 25 -     12752 ac-tg-tagccaaaaac------------t---g-g---a----g---g-aaaa
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                                379 25 +     14092 ac-tg-tagccaaaaac------------t---g-g---a----g---g-aaaa
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189541162 25 - 191637585 ac-tg-tagccaaaaac------------t---g-g---a----g---g-aaaa
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3334056 25 -  11177569 ac-tg-tagccaaaaac------------t---g-g---a----g---g-aaaa
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_3655594                                   20942 28 +     31101 at-aa-tagccaaaaac------------t---g-g---g-cgtg---g-gagg
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15522487 23 -  30322482 at-aa-tagccaaacac------------t---g-g---g----g---a---gg
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        5444 25 +     64341 tc-ag-tagcccaaaac------------t---g-g---a----g---g-aaaa
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           2505 25 +      4941 tc-ag-tagcccaaaac------------t---g-g---a----g---g-aaaa
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        5373 25 +     35603 tc-ag-tagcccaaaac------------t---g-g---a----g---g-aaaa
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    26860 25 +     38576 tc-ag-tagcccaaaac------------t---g-g---a----a---g-aaca
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         23557 25 +     66356 tc-ag-tagcccaaaac------------t---g-g---a----a---g-aaca
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          9384 27 -     23766 gt-aa-tagccaaaaac------------t---g-g---ggcg-g---g--ggg
i Lepilemur_ankaranensis.k141_596936                     C 0 I 6
s Lepilemur_dorsalis.k141_577674                             27449 28 +     45836 gt-aa-tagccaaaaac------------t---g-g---ggcg-g---g-gggg
i Lepilemur_dorsalis.k141_577674                         C 0 I 6
s Lepilemur_ruficaudatus.k141_320948                          1555 27 -      1719 at-aa-tagtcaaaaac------------t---g-g---ggtg-g---g-ggg-
i Lepilemur_ruficaudatus.k141_320948                     I 38 n 32
s Lepilemur_septentrionalis.k141_185316                      25385 28 +     54090 gt-aa-tagccaaaaac------------t---g-g---ggcggg---g--ggg
i Lepilemur_septentrionalis.k141_185316                  C 0 I 6
s Leptonychotes_weddellii.KB714746.1                       3041685 17 +   3914936 at-aa-tcaccaa-aa-------------c---g-g---g--------------
i Leptonychotes_weddellii.KB714746.1                     I 1 C 0
s Lepus_americanus.LepAme_scaffold_107385                     4359 22 -     14121 catga-aagctaacaac------------t---g-g---g----a---g-----
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1434924 25 +   1826925 ac-ag-tagccaaagcc------------t---t-g---a----g---g-aaaa
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                            4215801 21 -  43346337 at-aa-gagccaaaaac------------t---g-t---g----g---g-----
i Loxodonta_africana.GL010049.1                          I 1 C 0
s Macaca_arctoides.k141_2326796                               4737 25 +     40492 ac-ag-cagccaaagcc------------t---t-g---a----g---g-aaaa
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59673999 25 +  60120075 ac-ag-cagccaaagcc------------t---t-g---a----g---g-aaaa
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s Macaca_cyclopis.k119_18836                                 10493 25 -     26193 ac-ag-cagccaaagcc------------t---t-g---a----g---g-aaaa
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s Macaca_fascicularis.k141_814140                            78297 25 -    114318 ac-ag-cagccaaagcc------------t---t-g---a----g---g-aaaa
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s Macaca_fuscata.k119_255327                                  3996 25 -     23192 ac-ag-cagccaaagcc------------t---t-g---a----g---g-aaaa
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s Macaca_leonina.k141_3550399                                13456 25 -     29190 ac-ag-cagccaaagcc------------t---t-g---a----g---g-aaaa
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s Macaca_maura.k141_2733130                                  22024 25 +     37952 ac-ag-cagccaaagcc------------t---t-g---a----g---g-aaaa
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s Macaca_mulatta.NC_041758.1                             186837112 25 + 187317192 AC-AG-CAGCCAAAGcc------------t---t-g---a----g---g-aaaa
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s Macaca_nemestrina.KQ007038.1                            25455675 25 -  25927173 AC-AG-CAGCCAAAGcc------------t---t-g---a----g---g-aaaa
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s Macaca_nigra.k141_1655396                                  77873 25 +     89720 ac-ag-cagccaaagcc------------t---t-g---a----g---g-aaaa
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s Macaca_radiata.k141_3680011                                 4870 25 +     20474 ac-ag-cagccaaagcc------------t---t-g---a----g---g-aaaa
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s Macaca_siberu.k141_635500                                   4670 25 -     14993 ac-ag-cagccaaagcc------------t---t-g---a----g---g-aaaa
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s Macaca_silenus.Contig273                                  327542 25 -    668171 ac-ag-cagccaaagcc------------t---t-g---a----g---g-aaaa
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s Macaca_thibetana.k99_256239                                 2982 25 -     24072 ac-ag-cagccaaagcc------------t---t-g---a----g---g-aaaa
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s Macaca_tonkeana.k141_1498238                               23611 25 -     45290 ac-ag-cagccaaagcc------------t---t-g---a----g---g-aaaa
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 89438 19 +     94391 at-aa-tagccaagaac------------t---a-g---g--------------
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 1 C 0
s Mandrillus_leucophaeus.scaffold280                      23935198 24 -  24302211 ac-ag-tagccaaagcc------------t---t-g---a----g---g-aa-a
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               349331 23 +    752769 ac-ag-tagccaaagcc------------t---t-g---a----g---g-a--a
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              18279 30 +    737560 at-aa-tcaccaa-aactggGGCAGGGGGT---A-G---G--------------
i Manis_javanica.JSZB01003497.1                          I 1 C 0
s Manis_pentadactyla.KN006162.1                              49663 30 -    317179 at-aa-tcaccaa-aactggggcagggggt---g-a---g--------------
i Manis_pentadactyla.KN006162.1                          I 1 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         9164 15 -    207569 at-ac-tagccaaggac-------------------------------------
i Megaderma_lyra.MegLyr_scaffold_4542                    T 4272 I 4275
s Mellivora_capensis.MelCap_flattened_line_69365              8866 13 +     13704 at-aa-tctccaa-aa--------------------------------------
i Mellivora_capensis.MelCap_flattened_line_69365         I 1 I 2
s Mico_argentatus.k141_1239457                                3646 25 -      7380 tc-ag-tagcccaaaac------------t---g-g---a----g---g-gaaa
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               2712 25 +     18990 tc-ag-tagcccaaaac------------t---g-g---a----g---g-gaaa
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      3651 25 -      7356 tc-ag-tagcccaaaac------------t---g-g---a----g---g-gaaa
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18289890 29 -  93316391 at-aa-tagccaaaaac------------t---g-g---gg-gcag--g-gggg
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                14225 21 -     19307 aa-aa-tagccaagaac------------t---t-ggg-g--------------
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 1 C 0
s Miopithecus_ogouensis.k141_534055                           6918 25 -     28506 ac-ag-tagccaaagcc------------t---t-g---a----g---g-aaaa
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         4553 17 -      8324 at-aa-tcaccaa-aa-------------c---g-g---g--------------
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 1 C 0
s Mirza_zaza.k141_952172                                      7463 28 -     37649 at-aa-tagccaaaaac------------t---g-g---ag-gca---g-gggg
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140137 21 -    366855 gc-at-tagccaagagc------------t---t-g-agg--------------
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 33 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   34261 17 +     37127 at-aa-tcaccaa-aa-------------t---g-g---g--------------
i Mungos_mungo.MunMun_flattened_line_23663               I 1 C 0
s Mustela_putorius.JH418006.1                               300041 17 -  14710649 at-aa-tcaccaa-aa-------------c---a-g---g--------------
i Mustela_putorius.JH418006.1                            I 1 I 1
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187608 24 +    196477 at-aa-tagtcaccatt------------t---g-g---g-agaa---a-----
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 1 C 0
s Nasalis_larvatus.k141_413338                               12914 25 +     21681 ac-ag-tagccaaaaac------------t---t-g---a----g---g-aaaa
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Ochotona_princeps.JH802162.1                             1361412 22 +   3988456 accat-tatctaaacat------------t---g-a---g----a---g-----
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              505492 17 -   2017862 at-aa-tcaccaa-aa-------------c---g-g---g--------------
i Odobenus_rosmarus.KB229312.1                           I 1 C 0
s Oryctolagus_cuniculus.CM000791.1                        67145204 22 + 174332312 aatga-aagctaacaac------------t---g-g---g----a---g-----
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Pan_troglodytes.CM009242.2                             189140767 25 + 189151597 AC-AC-TAGCCAaaaac------------t---g-g---a----g---g-aaaa
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  150013 17 +    230217 at-aa-tcaccaa-aa-------------t---g-g---g--------------
i Panthera_onca.PanOnc_flattened_line_3271               I 1 C 0
s Panthera_pardus.KV860321.1                                263218 17 +  18783137 at-aa-tcaccaa-aa-------------t---g-g---g--------------
i Panthera_pardus.KV860321.1                             I 1 C 0
s Panthera_tigris.KE722367.1                               4719856 17 -   8748460 at-aa-tcaccaa-aa-------------t---g-g---g--------------
i Panthera_tigris.KE722367.1                             I 1 C 0
s Papio_anubis.CM001495.2                                183440952 25 + 183742232 ac-ag-tagccaaagcc------------t---t-g---a----g---g-aaaa
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             4645 25 +     20448 ac-ag-tagccaaagcc------------t---t-g---a----g---g-aaaa
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20561451 25 +  20919399 ac-ag-tagccaaagcc------------t---t-g---a----g---g-aaaa
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   3389 25 +     41871 ac-ag-tagccaaagcc------------t---t-g---a----g---g-aaaa
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     6675 25 +     27711 ac-ag-tagccaaagcc------------t---t-g---a----g---g-aaaa
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  6754 25 +      9205 ac-ag-tagccaaagcc------------t---t-g---a----g---g-aaaa
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11472 17 -     78924 at-aa-tcaccaa-aa-------------t---g-g---g--------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 1 I 4
s Piliocolobus_badius.k141_1234363                           41420 25 +     62158 ac-ag-tagccaaaaac------------t---t-g---a----g---g-aaaa
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        36150 25 +     89929 ac-ag-tagccaaaaac------------t---t-g---a----g---g-aaaa
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            37566 25 +     51399 ac-ag-tagccaaaaac------------t---t-g---a----g---g-aaaa
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14293804 25 -  14605196 ac-ag-tagccaaaaac------------t---t-g---a----g---g-aaaa
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189128886 25 + 189387572 AC-TG-TAGCCAAAaac------------t---g-g---a----g---g-aaaa
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9568494 25 +   9816681 ac-tg-tagccaaaaac------------t---g-g---a----g---g-aaaa
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               71082 25 -     81375 ac-ag-tagccaaaaac------------t---t-g---a----g---g-aaaa
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              2902 25 +     19060 ac-ag-tagccaaaaac------------t---t-g---a----g---g-aaaa
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 11452 22 -     22811 at-aaatagccaaaaac------------t---g-t---g----g---a-----
i Procavia_capensis.ProCapCap_scaffold_85530             I 1 C 0
s Prolemur_simus.MPIZ01000396.1                            2595158 21 -   4620579 at-aa-tagccaaaaat------------t---g-g---a----a---a-----
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     989144 28 +   2598838 at-aa-tagccaaaaac------------t---g-g---gg-gtg---g-aggg
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          27454 28 +     38485 at-aa-tagccaaaaac------------t---g-g---gg-gtg---g-aggg
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             3614 28 +      4256 at-aa-tatccaaaaac------------t---g-g---gg-gtg---g-aggg
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          24967 28 +     35766 at-aa-tagccaaaaac------------t---g-g---gg-gtg---g-aggg
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           3150 28 -     24134 at-aa-tagccaaaaac------------t---g-g---gg-gtg---g-aggg
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        26971 28 -     67325 at-aa-tagccaaaaac------------t---g-g---gg-gtg---g-aggg
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           3207 28 -      6182 at-aa-tagccaaaaac------------t---g-g---gg-gtg---g-aggg
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            13521 13 -     21811 aa-ag-tagccaagc---------------------------------------
i Pteronotus_parnellii.KE909381.1                        I 1 I 4
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39058 17 +     42204 at-aa-tcaccaa-aa-------------c---g-g---g--------------
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s Pteropus_alecto.KB030862.1                              22975608 19 +  28871421 at-aa-tacccaagaac------------t---a-g---g--------------
i Pteropus_alecto.KB030862.1                             I 1 C 0
s Pteropus_vampyrus.KN525825.1                             1358697 19 +   4952924 at-aa-tacccaagaac------------t---a-g---g--------------
i Pteropus_vampyrus.KN525825.1                           I 1 C 0
s Puma_concolor.QAVW01001104.1                            20273132 17 -  38429054 at-aa-tcaccaa-aa-------------t---g-g---g--------------
i Puma_concolor.QAVW01001104.1                           I 1 C 0
s Pygathrix_cinerea.k141_1153803                             12912 25 -     91421 ac-ag-tagccaaaaac------------t---t-g---a----g---g-aaaa
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7607038 25 +   7812017 ac-ag-tagccaaaaac------------t---t-g---a----g---g-aaaa
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             12886 25 -     72585 ac-ag-tagccaaaaac------------t---t-g---a----g---g-aaaa
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s Rhinopithecus_bieti.k119_217274                             4593 25 -     11128 ac-ag-tagccaaaaac------------t---t-g---a----g---g-aaaa
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s Rhinopithecus_roxellana.NC_044550.1                     91233948 25 - 195417433 ac-ag-tagccaaaaac------------t---t-g---a----g---g-aaaa
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7669597 25 +   7961872 ac-ag-tagccaaaaac------------t---t-g---a----g---g-aaaa
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                86619 19 -     96226 at-aa-tagccaagaac------------t---a-g---g--------------
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 1 C 0
s Saguinus_bicolor.k141_2619299                               5765 18 -      8359 ---------cccaaaac------------t---g-g---a----g---g-aaaa
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            12047 18 -     13588 ---------tccaaaac------------t---g-g---a----G---G-AAAA
i Saguinus_geoffroyi.k141_1413670                        C 0 C 0
s Saguinus_imperator.k141_717981                              5701 25 -      6207 tc-gg-tagcccaaaac------------t---g-g---a----g---g-aaaa
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s Saguinus_inustus.k141_699149                               11428 25 +     13640 tc-ag-tagcccaaaac------------t---g-g---a----g---g-aaaa
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s Saguinus_labiatus.k141_285685                               6290 25 +      8564 tc-ag-tagcccaaaac------------t---g-g---a----g---g-aaaa
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s Saguinus_midas.LG03                                    209466579 18 + 209938924 ---------cccaaaac------------t---g-g---a----g---g-aaaa
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 5778 25 -      9399 tc-ag-tagcccaaaac------------t---g-g---a----g---g-aaaa
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_63850                                 2912 18 +      3421 ---------tccaaaac------------t---g-g---a----g---g-aaaa
i Saguinus_oedipus.k141_63850                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119949123 25 - 121099817 TC-AG-TAGCCcaaaac------------t---g-a---a----g---g-aaaa
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       21577 25 +     46362 tc-ag-tagcccaaaac------------t---g-a---a----g---g-aaaa
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               21672 25 +     45824 tc-ag-tagcccaaaac------------t---g-a---a----c---g-aaaa
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             38300 25 -     64574 tc-ag-tagcccaaaac------------t---g-a---a----g---g-aaaa
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               1306 25 -     23631 tc-ag-tagcccaaaac------------t---g-a---a----g---g-aaaa
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 21565 25 -     61129 tc-ag-tagcccaaaac------------t---g-a---a----g---g-aaaa
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          17420 25 -     19888 ac-ag-tagccaaaaac------------t---t-g---a----g---g-aaaa
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      24623 25 +     39453 ac-ag-tagccaaaaac------------t---t-g---a----g---g-aaaa
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            5149 25 +     27826 ac-ag-tagccaaaaac------------t---t-g---a----g---g-aaaa
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             4669 25 -     19483 ac-ag-tagccaaaaac------------t---t-g---a----g---g-aaaa
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      4731 25 +      7198 ac-ag-tagccaaaaac------------t---t-g---a----g---g-aaaa
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         12991 25 +     15514 ac-ag-tagccaaaaac------------t---t-g---a----g---g-aaaa
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               2600 19 +   1910179 AT-GA-AAATCAAAAAA------------G---A-G---G--------------
i Solenodon_paradoxus.SolPar_flattened_line_126          I 1 C 0
s Sorex_araneus.JH798187.1                                13649650 14 -  18376816 ------TAGTCTAA-AA------------C---A-G---G--------------
i Sorex_araneus.JH798187.1                               I 4 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             29571 17 +     97271 at-aa-tcactaa-aa-------------c---a-g---g--------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 1 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              17149 17 -    196729 at-aa-tcaccaa-aa-------------t---g-g---g--------------
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 C 0
s Sus_scrofa.JH118708.1                                      34349 19 -     47482 at-aa-tagctaagaac------------t---a-g---a--------------
i Sus_scrofa.JH118708.1                                  I 1 C 0
s Symphalangus_syndactylus.tarseq_199                      1091204 25 -   1523678 ac-tg-tagccaaaaac------------t---g-g---a----g---g-aaaa
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 9461 19 +     41958 at-ac-tagccaagaac------------t---a-g---g--------------
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 1 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 70960 24 +    116680 at-aa-tagtcaccact------------t---g-g---gg-aaa---a-----
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 1 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      117585 19 -    156842 at-aa-tagccaagaac------------t---a-c---g--------------
i Tapirus_indicus.TapInd_scaffold_9301                   I 1 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    386038 19 +    539355 at-aa-tagccaagaac------------t---a-t---g--------------
i Tapirus_terrestris.TapTer_scaffold_755                 I 1 C 0
s Tarsius_lariang.k141_2201908                               24513 19 +     70052 ac-aa-t------aagc------------t---g-g---a----g---g-aaaa
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_2029956                               3853 19 +      4644 ac-aa-t------aagc------------t---g-g---a----g---g-aaaa
i Tarsius_wallacei.k141_2029956                          C 0 C 0
s Theropithecus_gelada.CM009954.1                        186426317 25 + 186847797 ac-ag-tagccaaagcc------------t---t-g---a----g---g-aaaa
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   3528 17 +      8208 at-aa-ttgccaaaaat------------t---g--------------------
i Tolypeutes_matacus.TolMat_scaffold_228639              I 1 I 3
s Tonatia_saurophila.TonSau_scaffold_294                     79766 21 +    610378 aa-aa-tagccaagaac------------t---t-gga-a--------------
i Tonatia_saurophila.TonSau_scaffold_294                 I 1 C 0
s Trachypithecus_auratus.k141_722599                          8722 25 -     20410 ac-ag-tagccaaaaac------------t---t-g---a----g---g-aaaa
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    12916 25 +     15221 ac-ag-tagccaaaaac------------t---t-g---a----g---g-aaaa
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        8823 25 +     19930 ac-ag-tagccaaaaac------------t---t-g---a----g---g-aaaa
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       5252 25 -     19997 ac-ag-tagccaaaaac------------t---t-g---a----g---g-aaaa
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            45372 25 -     60166 ac-ag-tagccaaaaac------------t---t-g---a----g---g-aaaa
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        12845 25 -     27529 ac-ag-tagccaaaaac------------t---t-g---a----g---g-aaaa
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     12786 25 -     18194 ac-ag-tagccaaaaac------------t---t-g---a----g---g-aaaa
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           6519 25 -     21137 ac-ag-tagccaaaaac------------t---t-g---a----g---g-aaaa
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    5222 25 -     10723 ac-ag-tagccaaaaac------------t---t-g---a----g---g-aaaa
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         4374 25 +      9834 ac-ag-tagccaaaaac------------t---t-g---a----g---g-aaaa
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        22690 25 +     32220 ac-ag-tagccaaaaac------------t---t-g---a----g---g-aaaa
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5936789 25 +   6242583 ac-ag-tagccaaaaac------------t---t-g---a----g---g-aaaa
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        6037 25 +     20839 ac-ag-tagccaaaaac------------t---t-g---a----g---g-aaaa
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2154067  8 +   4065304 ---------------at------------g---g-g---g----a---g-----
i Tupaia_chinensis.KB320699.1                            I 3 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     7724  8 -     10553 ---------------at------------g---g-g---g----a---g-----
i Tupaia_tana.TupTan_flattened_line_97126                I 46 C 0
s Ursus_maritimus.KK499267.1                               4849262 17 -   5085361 at-aa-tcaccaa-aa-------------t---g-g---g--------------
i Ursus_maritimus.KK499267.1                             I 5 C 0
s Varecia_rubra.k141_590885                                   9818 25 +     50397 at-aa-tagccaaaaac------------t---g-g---g----g---g-gggg
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              9872 26 +     24756 at-aa-tagccaaaaac------------t---ggg---g----g---g-gggg
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5370718 25 -   5488506 gt-aa-tagccaagaactgg------aact---a-g---a--------------
i Vicugna_pacos.KN270157.1                               I 1 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          3986 17 +     86975 at-aa-tcaccaa-aa-------------c---a-g---g--------------
i Zalophus_californianus.ZalCal_flattened_line_17732     I 1 C 0
e Echinops_telfairi.JH980293.1                            48778276  0 + 111700974 C
e Otolemur_garnettii.GL873799.1                             694317  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         2153  0 +      8798 C
e Galago_senegalensis.k141_631886                             2318  0 +     11339 C
e Galago_moholi.ctg2040                                     424611  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Chiropotes_albinasus.k141_2813271                           8451 841 +     11226 I
e Cebus_unicolor.k141_219506                                 14903  0 -     16904 I
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Mus_pahari.LT608297.1                                   31352818  0 -  89631738 C
e Mus_spretus.CM004101.1                                  90750234  0 - 130317789 C
e Mus_musculus.chr8                                       87648156  0 - 129401213 C
e Mus_caroli.LT608237.1                                   84359172  0 - 120012414 C
e Loris_tardigradus.ctg83                                  1002909  0 +   6120653 C
e Loris_lydekkerianus.k141_2539221                            4070  0 +     11245 C
e Perodicticus_potto.k141_1092580                             6662  0 +     25941 C
e Perodicticus_ibeanus.k141_855320                            8284  0 +     13100 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Xerus_inauris.XerIna_scaffold_48378                        22715  0 -     24430 C
e Vulpes_lagopus.VulLag_flattened_line_30954                  9730  0 -     43706 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   52652  8 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Spermophilus_dauricus.KZ294078.1                         1951468 299 -   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11304  0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152480  8 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rattus_norvegicus.chr16                                 53568239  0 +  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Psammomys_obesus.NESX01036370.1                             8401  0 -     21651 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18191985  0 -  18517816 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Pan_paniscus.KQ411613.1                                    41837 195 +     80009 I
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       461284  0 -    559221 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7577 1418 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    77382  0 +    102263 C
e Ondatra_zibethicus.OndZib_scaffold_46174                   22267 24 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105748257  0 + 199412804 C
e Nycticebus_coucang.k141_5327727                             5516  0 +      8486 C
e Nycticebus_bengalensis.LG01                            102577830  0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9148320  0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11258701  7 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    18126  0 -    145209 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12180532  2 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 30759  0 +    140813 C
e Marmota_marmota.CZRN01000018.1                          33100580 298 -  40650429 I
e Lycaon_pictus.CM007581.1                                17954062  0 -  59628241 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Ictidomys_tridecemlineatus.JH393364.1                    7518272 302 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Galagoides_demidoff.k141_1959596                            6126  0 +      6795 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Ellobius_talpinus.LOJH01109367.1                            3704  7 -      6299 I
e Ellobius_lutescens.LOEQ01008920.1                          17650  7 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089466 1162 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            62283 174 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    835315  0 +   1526836 C
e Cricetulus_griseus.LT883664.1                           11665468  2 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 48141  0 +     63868 C
e Condylura_cristata.JH655891.1                           17547413  8 -  53390261 I
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    136243  0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18499334  0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17957822  0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9033557  0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    184171  0 -    185531 C
e CanFam4.chr16                                           17798114  0 -  60362399 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Arctocebus_calabarensis.k141_2318572                        9644  0 +     14667 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      10117 439 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     72139 576 -     89534 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     68454  0 +     87051 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       4530 3 +     62944 GA-A
s Allenopithecus_nigroviridis.k141_3361533                   12445 3 -     52922 ga-a
i Allenopithecus_nigroviridis.k141_3361533               C 0 I 2
s Allochrocebus_lhoesti.k141_4309873                         12387 3 -     28001 ga-a
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          2833 3 -     18505 ga-a
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           3682 3 -     12518 ga-a
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                              1243 3 -     27731 ga-a
i Alouatta_belzebul.k141_3238538                         C 0 I 2
s Alouatta_caraya.k141_1743867                                1368 3 +      3134 ga-a
i Alouatta_caraya.k141_1743867                           C 0 I 2
s Alouatta_discolor.k141_743489                               1503 3 -     45847 ga-a
i Alouatta_discolor.k141_743489                          C 0 I 2
s Alouatta_juara.k141_1509701                                22709 3 +     25266 ga-a
i Alouatta_juara.k141_1509701                            C 0 I 2
s Alouatta_macconnelli.k141_1406484                           1893 3 +      2906 ga-a
i Alouatta_macconnelli.k141_1406484                      C 0 I 2
s Alouatta_nigerrima.k141_3472759                            16006 3 -     18578 ga-a
i Alouatta_nigerrima.k141_3472759                        C 0 I 2
s Alouatta_palliata.k141_2135620                              1393 3 +     47717 ga-a
i Alouatta_palliata.k141_2135620                         C 0 I 2
s Alouatta_puruensis.k141_1253230                             1523 3 -      3544 ga-a
i Alouatta_puruensis.k141_1253230                        C 0 I 2
s Alouatta_seniculus.k141_117119                             12743 3 +     50774 ga-a
i Alouatta_seniculus.k141_117119                         C 0 I 2
s Aotus_azarae.k141_3104676                                  13363 3 -     33861 ga-a
i Aotus_azarae.k141_3104676                              C 0 I 2
s Aotus_griseimembra.k141_2240599                            13383 3 -     34016 ga-a
i Aotus_griseimembra.k141_2240599                        C 0 I 2
s Aotus_nancymaae.KZ198451.1                               4295780 3 -   5030052 ga-a
i Aotus_nancymaae.KZ198451.1                             C 0 I 2
s Aotus_trivirgatus.k141_2152450                             13385 3 -     34685 ga-a
i Aotus_trivirgatus.k141_2152450                         C 0 I 2
s Aotus_vociferans.k141_344750                               26506 3 -     47192 ga-a
i Aotus_vociferans.k141_344750                           C 0 I 2
s Avahi_laniger.k141_765380                                  52118 1 -     92717 g---
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              52747 1 +     85213 g---
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             3125 3 -     10423 ga-a
i Callibella_humilis.k141_1278103                        C 0 I 2
s Callimico_goeldii.k141_1091182                             22625 3 +     31915 ga-a
i Callimico_goeldii.k141_1091182                         C 0 I 2
s Callithrix_geoffroyi.k119_512088                            3095 3 +      5267 ga-a
i Callithrix_geoffroyi.k119_512088                       C 0 I 2
s Callithrix_jacchus.pat_scaffold_3                       23588309 3 - 189096842 GA-A
i Callithrix_jacchus.pat_scaffold_3                      C 0 I 2
s Callithrix_kuhlii.k119_1164682                              9839 3 -     12001 ga-a
i Callithrix_kuhlii.k119_1164682                         C 0 I 2
s Carlito_syrichta.NW_007259797.1                           154410 2 -    496798 -a-a
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Cebuella_niveiventris.k141_1251222                          7749 3 -     11392 ga-a
i Cebuella_niveiventris.k141_1251222                     C 0 I 2
s Cebuella_pygmaea.k141_1309012                               3847 3 -      7577 ga-a
i Cebuella_pygmaea.k141_1309012                          C 0 I 2
s Cebus_olivaceus.k141_1000828                                1785 3 -      2944 ga-a
i Cebus_olivaceus.k141_1000828                           C 0 I 2
s Cephalopachus_bancanus.k141_1423433                         3921 2 +     31688 -a-a
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4473403 1 +   4669795 ---a
i Cercocebus_atys.KQ010504.1                             I 1 I 1
s Cercocebus_chrysogaster.k141_393940                        11951 1 -     19203 ---a
i Cercocebus_chrysogaster.k141_393940                    I 1 I 2
s Cercocebus_lunulatus.k141_3846941                           6373 1 +      8260 ---a
i Cercocebus_lunulatus.k141_3846941                      I 1 I 2
s Cercocebus_torquatus.k141_3057011                           6599 1 +     27781 ---a
i Cercocebus_torquatus.k141_3057011                      C 0 I 2
s Cercopithecus_ascanius.k141_1024104                         6755 3 -     20310 ga-a
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           9734 3 +     29689 ga-a
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            4165 3 +      9989 ga-a
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          12413 3 -     27936 ga-a
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            1289 3 -     17152 ga-a
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38814817 3 +  39242232 ga-a
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21220518 3 -  21565898 ga-a
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       37637 3 -     53127 ga-a
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        4897 3 +      7159 ga-a
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       12440 3 -     27947 ga-a
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         12413 3 +     17596 ga-a
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          1636 3 +     26000 ga-a
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             19527 1 -     52598 g---
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           14878 1 +     57038 g---
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chlorocebus_aethiops.ctg25                              18426384 3 -  18827391 ga-a
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       12822 3 -     50209 ga-a
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135419822 3 + 135778131 ga-a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1908338 3 +   2368649 ga-a
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199948014 3 + 200372422 ga-a
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              34876 3 +     84244 ga-a
i Colobus_polykomos.k141_906115                          C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12535741 1 -  12879189 g---
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Erythrocebus_patas.Contig38                             21203012 3 -  21539334 ga-a
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              12222 1 -     14127 g---
i Eulemur_albifrons.k141_342033                          I 4 C 0
s Eulemur_collaris.k141_377015                                4920 1 -     16928 g---
i Eulemur_collaris.k141_377015                           I 4 C 0
s Eulemur_coronatus.k141_885031                              13957 1 -     25546 g---
i Eulemur_coronatus.k141_885031                          I 4 C 0
s Eulemur_flavifrons.k141_1184614                            11147 1 +     26330 g---
i Eulemur_flavifrons.k141_1184614                        I 4 C 0
s Eulemur_fulvus.k141_544389                                 12386 1 +     23973 g---
i Eulemur_fulvus.k141_544389                             I 4 C 0
s Eulemur_macaco.k141_1562045                                11147 1 +     75513 g---
i Eulemur_macaco.k141_1562045                            I 4 C 0
s Eulemur_mongoz.k141_232305                                  9089 1 +     97555 g---
i Eulemur_mongoz.k141_232305                             I 4 C 0
s Eulemur_rubriventer.k141_571033                            12025 1 +     26496 g---
i Eulemur_rubriventer.k141_571033                        I 4 C 0
s Eulemur_rufus.k141_1476633                                  2622 1 -     17153 g---
i Eulemur_rufus.k141_1476633                             I 4 C 0
s Eulemur_sanfordi.k141_1122526                              12198 1 +    111500 g---
i Eulemur_sanfordi.k141_1122526                          I 4 C 0
s Gorilla_beringei.k141_3596273                              13783 3 -     32273 ga-a
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186335931 3 + 186649187 ga-a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           5278 1 -     19426 g---
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             10427 1 -     15286 a---
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             12066 1 +     18253 g---
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         12167 1 -     41752 g---
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         12005 1 -     16460 g---
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Hoolock_leuconedys.ctg274                                    432594 3 +    630532 aa-a
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_232023                                 360 3 -     12752 ga-a
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                                404 3 +     14092 ga-a
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189541187 3 - 191637585 ga-a
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3334081 3 -  11177569 ga-a
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_3655594                                   20970 1 +     31101 g---
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15522510 1 -  30322482 g---
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        5469 3 +     64341 ga-a
i Leontocebus_fuscicollis.k141_1820339                   C 0 I 2
s Leontocebus_illigeri.k141_3350179                           2530 3 +      4941 ga-a
i Leontocebus_illigeri.k141_3350179                      C 0 I 2
s Leontocebus_nigricollis.k141_4610752                        5398 3 +     35603 ga-a
i Leontocebus_nigricollis.k141_4610752                   C 0 I 2
s Leontopithecus_chrysomelas.k141_1519602                    26885 3 +     38576 ga-a
i Leontopithecus_chrysomelas.k141_1519602                C 0 I 2
s Leontopithecus_rosalia.k141_464620                         23582 3 +     66356 ga-a
i Leontopithecus_rosalia.k141_464620                     C 0 I 2
s Lophocebus_aterrimus.ctg367                              1434949 1 +   1826925 ---a
i Lophocebus_aterrimus.ctg367                            C 0 I 2
s Lepilemur_ankaranensis.k141_596936                          9417 1 -     23766 g---
i Lepilemur_ankaranensis.k141_596936                     I 6 C 0
s Lepilemur_dorsalis.k141_577674                             27483 1 +     45836 g---
i Lepilemur_dorsalis.k141_577674                         I 6 C 0
s Lepilemur_ruficaudatus.k141_667017                          2019 1 -      2151 g---
i Lepilemur_ruficaudatus.k141_667017                     I 32 C 0
s Lepilemur_septentrionalis.k141_185316                      25419 1 +     54090 g---
i Lepilemur_septentrionalis.k141_185316                  I 6 C 0
s Macaca_arctoides.k141_2326796                               4762 3 +     40492 ga-a
i Macaca_arctoides.k141_2326796                          C 0 I 2
s Macaca_assamensis.Contig5                               59674024 3 +  60120075 ga-a
i Macaca_assamensis.Contig5                              C 0 I 2
s Macaca_cyclopis.k119_18836                                 10518 3 -     26193 ga-a
i Macaca_cyclopis.k119_18836                             C 0 I 2
s Macaca_fascicularis.k141_814140                            78322 3 -    114318 ga-a
i Macaca_fascicularis.k141_814140                        C 0 I 2
s Macaca_fuscata.k119_255327                                  4021 3 -     23192 ga-a
i Macaca_fuscata.k119_255327                             C 0 I 2
s Macaca_leonina.k141_3550399                                13481 3 -     29190 ga-a
i Macaca_leonina.k141_3550399                            C 0 I 3
s Macaca_maura.k141_2733130                                  22049 3 +     37952 ga-a
i Macaca_maura.k141_2733130                              C 0 I 2
s Macaca_mulatta.NC_041758.1                             186837137 3 + 187317192 ga-a
i Macaca_mulatta.NC_041758.1                             C 0 I 2
s Macaca_nemestrina.KQ007038.1                            25455700 3 -  25927173 ga-a
i Macaca_nemestrina.KQ007038.1                           C 0 I 2
s Macaca_nigra.k141_1655396                                  77898 3 +     89720 ga-a
i Macaca_nigra.k141_1655396                              C 0 I 2
s Macaca_radiata.k141_3680011                                 4895 3 +     20474 ga-a
i Macaca_radiata.k141_3680011                            C 0 I 2
s Macaca_siberu.k141_635500                                   4695 4 -     14993 gaaa
i Macaca_siberu.k141_635500                              C 0 I 2
s Macaca_silenus.Contig273                                  327567 3 -    668171 ga-a
i Macaca_silenus.Contig273                               C 0 I 2
s Macaca_thibetana.k99_256239                                 3007 3 -     24072 ga-a
i Macaca_thibetana.k99_256239                            C 0 I 2
s Macaca_tonkeana.k141_1498238                               23636 3 -     45290 ga-a
i Macaca_tonkeana.k141_1498238                           C 0 I 2
s Mandrillus_leucophaeus.scaffold280                      23935222 1 -  24302211 ---a
i Mandrillus_leucophaeus.scaffold280                     C 0 I 2
s Mandrillus_sphinx.Contig270                               349354 1 +    752769 ---a
i Mandrillus_sphinx.Contig270                            C 0 I 2
s Mico_argentatus.k141_1239457                                3671 3 -      7380 ga-a
i Mico_argentatus.k141_1239457                           C 0 I 2
s Mico_humeralifer.k141_1976199                               2737 3 +     18990 ga-a
i Mico_humeralifer.k141_1976199                          C 0 I 2
s Mico_schneideri.k141_1950671                                      3676 3 -      7356 ga-a
i Mico_schneideri.k141_1950671                                 C 0 I 2
s Microcebus_murinus.CM007674.1                           18289919 1 -  93316391 g---
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_534055                           6943 3 -     28506 ga-a
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirza_zaza.k141_952172                                      7491 1 -     37649 g---
i Mirza_zaza.k141_952172                                 C 0 C 0
s Nasalis_larvatus.k141_413338                               12939 3 +     21681 ga-a
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Pan_troglodytes.CM009242.2                             189140792 2 + 189151597 g--a
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                183440977 1 + 183742232 ---a
i Papio_anubis.CM001495.2                                C 0 I 2
s Papio_cynocephalus.k141_4307930                             4670 1 +     20448 ---a
i Papio_cynocephalus.k141_4307930                        C 0 I 2
s Papio_hamadryas.Contig39                                20561476 1 +  20919399 ---a
i Papio_hamadryas.Contig39                               C 0 I 2
s Papio_kindae.k141_1936966                                   3414 1 +     41871 ---a
i Papio_kindae.k141_1936966                              C 0 I 2
s Papio_papio.k141_802527                                     6700 1 +     27711 ---a
i Papio_papio.k141_802527                                C 0 I 2
s Papio_ursinus.k141_3428135                                  6779 1 +      9205 ---a
i Papio_ursinus.k141_3428135                             C 0 I 2
s Piliocolobus_badius.k141_1234363                           41445 3 +     62158 ga-a
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        36175 3 +     89929 ga-a
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            37591 3 +     51399 ga-a
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14293829 3 -  14605196 ga-a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189128911 3 + 189387572 ga-a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9568519 3 +   9816681 ga-a
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               71107 3 -     81375 ga-a
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              2927 3 +     19060 ga-a
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     989172 1 +   2598838 g---
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          27482 1 +     38485 g---
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             3642 1 +      4256 g---
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          24995 1 +     35766 g---
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           3178 1 -     24134 g---
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        26999 1 -     67325 g---
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           3235 1 -      6182 g---
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pygathrix_cinerea.k141_1153803                             12937 3 -     91421 ga-a
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7607063 3 +   7812017 ga-a
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             12911 3 -     72585 ga-a
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             4618 3 -     11128 ga-a
i Rhinopithecus_bieti.k119_217274                        C 0 I 3
s Rhinopithecus_roxellana.NC_044550.1                     91233973 3 - 195417433 ga-a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7669622 3 +   7961872 ga-a
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_2619299                               5783 3 -      8359 ga-a
i Saguinus_bicolor.k141_2619299                          C 0 I 2
s Saguinus_geoffroyi.k141_1413670                            12065 3 -     13588 GA-A
i Saguinus_geoffroyi.k141_1413670                        C 0 I 2
s Saguinus_imperator.k141_717981                              5726 3 -      6207 ga-a
i Saguinus_imperator.k141_717981                         C 0 I 2
s Saguinus_inustus.k141_699149                               11453 3 +     13640 ga-a
i Saguinus_inustus.k141_699149                           C 0 I 2
s Saguinus_labiatus.k141_285685                               6315 3 +      8564 ga-a
i Saguinus_labiatus.k141_285685                          C 0 I 2
s Saguinus_midas.LG03                                    209466597 3 + 209938924 ga-a
i Saguinus_midas.LG03                                    C 0 I 2
s Saguinus_mystax.k141_374627                                 5803 3 -      9399 ga-a
i Saguinus_mystax.k141_374627                            C 0 I 2
s Saguinus_oedipus.k141_63850                                 2930 3 +      3421 ga-a
i Saguinus_oedipus.k141_63850                            C 0 I 2
s Saimiri_boliviensis.NW_024100920.1                     119949148 3 - 121099817 ga-a
i Saimiri_boliviensis.NW_024100920.1                     C 0 I 2
s Saimiri_cassiquiarensis.k141_2188234                       21602 3 +     46362 ga-a
i Saimiri_cassiquiarensis.k141_2188234                   C 0 I 2
s Saimiri_macrodon.k141_716185                               21697 3 +     45824 ga-a
i Saimiri_macrodon.k141_716185                           C 0 I 2
s Saimiri_oerstedii.k141_1487881                             38325 3 -     64574 ga-a
i Saimiri_oerstedii.k141_1487881                         C 0 I 2
s Saimiri_sciureus.k141_2278166                               1331 3 -     23631 ga-a
i Saimiri_sciureus.k141_2278166                          C 0 I 2
s Saimiri_ustus.k141_1484609                                 21590 3 -     61129 ga-a
i Saimiri_ustus.k141_1484609                             C 0 I 2
s Semnopithecus_entellus.k141_11662                          17445 2 -     19888 ga--
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      24648 2 +     39453 ga--
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            5174 2 +     27826 ga--
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             4694 2 -     19483 ga--
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      4756 2 +      7198 ga--
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         13016 2 +     15514 ga--
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1091229 3 -   1523678 ga-a
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_2201908                               24532 2 +     70052 -a-a
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_2029956                               3872 2 +      4644 -a-a
i Tarsius_wallacei.k141_2029956                          C 0 C 0
s Theropithecus_gelada.CM009954.1                        186426342 1 + 186847797 ---a
i Theropithecus_gelada.CM009954.1                        C 0 I 2
s Trachypithecus_auratus.k141_722599                          8747 2 -     20410 ga--
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    12941 2 +     15221 ga--
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        8848 2 +     19930 ga--
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       5277 2 -     19997 ga--
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            45397 3 -     60166 ga-a
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        12870 2 -     27529 ga--
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     12811 2 -     18194 ga--
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           6544 2 -     21137 ga--
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    5247 2 -     10723 ga--
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         4399 2 +      9834 ga--
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        22715 2 +     32220 ga--
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5936814 2 +   6242583 ga--
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        6062 3 +     20839 ga-a
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Varecia_rubra.k141_590885                                   9843 1 +     50397 g---
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              9898 1 +     24756 g---
i Varecia_variegata.k141_1128296                         C 0 C 0
e Echinops_telfairi.JH980293.1                            48778276 0 + 111700974 C
e Otolemur_garnettii.GL873799.1                             694317 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         2153 0 +      8798 C
e Galago_senegalensis.k141_631886                             2318 0 +     11339 C
e Galago_moholi.ctg2040                                     424611 0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          54316 0 -     80660 C
e Sapajus_apella.ctg103                                    5419275 0 -   5703754 C
e Chiropotes_albinasus.k141_2813271                           8451 841 +     11226 I
e Cebus_unicolor.k141_219506                                 14903 0 -     16904 I
e Cebus_albifrons.Contig27                                25650611 0 +  26074798 C
e Mus_pahari.LT608297.1                                   31352818 0 -  89631738 C
e Mus_spretus.CM004101.1                                  90750234 0 - 130317789 C
e Mus_musculus.chr8                                       87648156 0 - 129401213 C
e Mus_caroli.LT608237.1                                   84359172 0 - 120012414 C
e Chrysochloris_asiatica.ChrAsi_scaffold_2561901               333 0 -       464 C
e Loris_tardigradus.ctg83                                  1002909 0 +   6120653 C
e Loris_lydekkerianus.k141_2539221                            4070 0 +     11245 C
e Perodicticus_potto.k141_1092580                             6662 0 +     25941 C
e Perodicticus_ibeanus.k141_855320                            8284 0 +     13100 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_17732          4003 0 +     86975 C
e Xerus_inauris.XerIna_scaffold_48378                        22715 0 -     24430 C
e Vulpes_lagopus.VulLag_flattened_line_30954                  9730 0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5370743 0 -   5488506 C
e Ursus_maritimus.KK499267.1                               4849279 0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   52652 8 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     7732 0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2154075 0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79787 0 +    610378 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   3545 3 +      8208 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937 0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    386057 0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      117604 0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 70984 0 +    116680 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                 9480 0 +     41958 C
e Sus_scrofa.JH118708.1                                      34368 0 -     47482 C
e Suricata_suricatta.SurSur_flattened_line_6629              17166 0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             29588 0 +     97271 C
e Spermophilus_dauricus.KZ294078.1                         1951468 299 -   3870691 I
e Sorex_araneus.JH798187.1                                13649664 0 -  18376816 C
e Solenodon_paradoxus.SolPar_flattened_line_126               2619 0 +   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_60841                    11304 0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152480 8 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                86638 0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rattus_norvegicus.chr16                                 53568239 0 +  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20273149 0 -  38429054 C
e Pteropus_vampyrus.KN525825.1                             1358716 0 +   4952924 C
e Pteropus_alecto.KB030862.1                              22975627 0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         39075 1 +     42204 I
e Pteronotus_parnellii.KE909381.1                            13534 4 -     21811 I
e Psammomys_obesus.NESX01036370.1                             8401 0 -     21651 C
e Prolemur_simus.MPIZ01000396.1                            2595179 0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                 11474 0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823 1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813 0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18191985 0 -  18517816 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11489 4 -     78924 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4719873 0 -   8748460 C
e Panthera_pardus.KV860321.1                                263235 0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  150030 0 +    230217 C
e Pan_paniscus.KQ411613.1                                    41837 195 +     80009 I
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       461284 0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                        67145226 0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7577 1418 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    77382 0 +    102263 C
e Ondatra_zibethicus.OndZib_scaffold_46174                   22267 24 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              505509 0 -   2017862 C
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1361434 0 +   3988456 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105748257 0 + 199412804 C
e Nycticebus_coucang.k141_5327727                             5516 0 +      8486 C
e Nycticebus_bengalensis.LG01                            102577830 0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9148320 0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805 0 +       996 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187632 0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33016 1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456 1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390 1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692 1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               300058 1 -  14710649 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           5520 1 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   34278 0 +     37127 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 140158 0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         4570 0 -      8324 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686 0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11258701 7 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                14246 0 -     19307 C
e Microgale_talazaci.MicTal_scaffold_6613                    18126 0 -    145209 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12180532 2 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 30759 0 +    140813 C
e Mellivora_capensis.MelCap_flattened_line_69365              8879 2 +     13704 I
e Megaderma_lyra.MegLyr_scaffold_4542                         9179 4275 -    207569 I
e Marmota_marmota.CZRN01000018.1                          33100580 298 -  40650429 I
e Manis_pentadactyla.KN006162.1                              49693 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18309 0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 89457 0 +     94391 C
e Lycaon_pictus.CM007581.1                                17954062 0 -  59628241 C
e Loxodonta_africana.GL010049.1                            4215822 0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     4381 0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3041702 0 +   3914936 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Ictidomys_tridecemlineatus.JH393364.1                    7518272 302 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      81626 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547 0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  43303 0 +     55795 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42062 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       110636 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_403422                 481 0 -       893 C
e Heterocephalus_glaber.JH602082.1                        20660051 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               241166 0 +    327341 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Galeopterus_variegatus.GalVar_scaffold_197845               2474 0 -      3123 C
e Galagoides_demidoff.k141_1959596                            6126 0 +      6795 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  8377 0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20194863 0 + 205367284 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Equus_przewalskii.KK951119.1                               32029 0 +    498745 C
e Equus_caballus.CM000403.2                               18530014 0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1282193 0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2144447 1 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16328165 1 -  41312741 I
e Ellobius_talpinus.LOJH01109367.1                            3704 7 -      6299 I
e Ellobius_lutescens.LOEQ01008920.1                          17650 7 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089466 1162 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Eidolon_helvum.KE759718.1                                   9364 0 +     11740 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084 0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    4884 0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  672131 0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8628732 0 +  20541912 C
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            62283 174 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    835315 0 +   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129             27326 0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_37019               1630 0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11665468 2 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 48141 0 +     63868 C
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          12841 7 -     20389 I
e Condylura_cristata.JH655891.1                           17547413 8 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            171805 0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 16706 0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498 0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_229060            6298 3 -      6351 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1308 0 -     25243 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157 0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     91853 0 +    217609 C
e Castor_canadensis.CasCan_scaffold_2074                    136243 0 +    179628 C
e Carollia_perspicillata.CarPer_scaffold_92756                3700 0 -     11696 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18499334 0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17957822 0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9033557 0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    184171 0 -    185531 C
e CanFam4.chr16                                           17798114 0 -  60362399 C
e Camelus_ferus.KB017975.1                                  401996 0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2333714 0 -   7040546 C
e Camelus_bactrianus.KN276810.1                           10001256 0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3338 0 +     43469 C
e Arctocebus_calabarensis.k141_2318572                        9644 0 +     14667 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      10117 439 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183926 0 +    412891 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     72139 576 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             78196 0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9509413 0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     68454 0 +     87051 C
e Acinonyx_jubatus.LLWD01001279.1                           826151 0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       4533  6 +     62944 A----A-----A-------A----AA
s Acinonyx_jubatus.LLWD01001279.1                           826151  8 -   1699592 gagg-g-----g-------g----g-
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 1
s Ailuropoda_melanoleuca.LNAT01000098.1                    9509413  5 -  29979442 g----g-----g-------a----a-
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 1
s Ailurus_fulgens.LNAC01001112.1                             78196  7 -    347723 g----g-----g--ga---a----g-
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 1
s Allenopithecus_nigroviridis.k141_3361533                   12450  3 -     52922 -----------a-------a----a-
i Allenopithecus_nigroviridis.k141_3361533               I 2 I 1
s Allochrocebus_lhoesti.k141_4309873                         12390  6 -     28001 aa---a-----a-------a----a-
i Allochrocebus_lhoesti.k141_4309873                     C 0 I 1
s Allochrocebus_preussi.k141_1442296                          2836  6 -     18505 aa---a-----a-------a----a-
i Allochrocebus_preussi.k141_1442296                     C 0 I 1
s Allochrocebus_solatus.k141_166128                           3685  6 -     12518 aa---a-----a-------a----a-
i Allochrocebus_solatus.k141_166128                      C 0 I 1
s Alouatta_belzebul.k141_3238538                              1248  5 -     27731 a----a-----a-------a----a-
i Alouatta_belzebul.k141_3238538                         I 2 I 1
s Alouatta_caraya.k141_1743867                                1373  5 +      3134 a----a-----a-------a----a-
i Alouatta_caraya.k141_1743867                           I 2 I 1
s Alouatta_discolor.k141_743489                               1508  5 -     45847 a----a-----a-------a----a-
i Alouatta_discolor.k141_743489                          I 2 I 1
s Alouatta_juara.k141_1509701                                22714  5 +     25266 a----a-----a-------a----a-
i Alouatta_juara.k141_1509701                            I 2 I 1
s Alouatta_macconnelli.k141_1406484                           1898  5 +      2906 a----a-----a-------a----a-
i Alouatta_macconnelli.k141_1406484                      I 2 I 1
s Alouatta_nigerrima.k141_3472759                            16011  5 -     18578 a----a-----a-------a----a-
i Alouatta_nigerrima.k141_3472759                        I 2 I 1
s Alouatta_palliata.k141_2135620                              1398  5 +     47717 a----a-----a-------a----a-
i Alouatta_palliata.k141_2135620                         I 2 I 1
s Alouatta_puruensis.k141_1253230                             1528  5 -      3544 a----a-----a-------a----a-
i Alouatta_puruensis.k141_1253230                        I 2 I 1
s Alouatta_seniculus.k141_117119                             12748  5 +     50774 a----a-----a-------a----a-
i Alouatta_seniculus.k141_117119                         I 2 I 1
s Anoura_caudifer.AnoCau_scaffold_1412                      183926  4 +    412891 g-g--a-----a--------------
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 2
s Aotus_azarae.k141_3104676                                  13368  6 -     33861 aa---a-----a-------a----a-
i Aotus_azarae.k141_3104676                              I 2 I 1
s Aotus_griseimembra.k141_2240599                            13388  6 -     34016 aa---a-----a-------a----a-
i Aotus_griseimembra.k141_2240599                        I 2 I 1
s Aotus_nancymaae.KZ198451.1                               4295785  6 -   5030052 aa---a-----a-------a----a-
i Aotus_nancymaae.KZ198451.1                             I 2 I 1
s Aotus_trivirgatus.k141_2152450                             13390  6 -     34685 aa---a-----a-------a----a-
i Aotus_trivirgatus.k141_2152450                         I 2 I 1
s Aotus_vociferans.k141_344750                               26511  6 -     47192 aa---a-----a-------a----a-
i Aotus_vociferans.k141_344750                           I 2 I 1
s Avahi_laniger.k141_765380                                  52119  1 -     92717 ------------------------a-
i Avahi_laniger.k141_765380                              C 0 I 1
s Avahi_peyrierasi.k141_1424874                              52748  1 +     85213 ------------------------a-
i Avahi_peyrierasi.k141_1424874                          C 0 I 1
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3338  4 +     43469 g-g--a-----a--------------
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 2
s Callibella_humilis.k141_1278103                             3130  5 -     10423 a----a-----a-------a----a-
i Callibella_humilis.k141_1278103                        I 2 I 1
s Callimico_goeldii.k141_1091182                             22630  5 +     31915 a----a-----a-------a----a-
i Callimico_goeldii.k141_1091182                         I 2 I 2
s Callithrix_geoffroyi.k119_512088                            3100  5 +      5267 a----a-----a-------a----a-
i Callithrix_geoffroyi.k119_512088                       I 2 I 1
s Callithrix_jacchus.pat_scaffold_3                       23588314  5 - 189096842 A----A-----A-------A----A-
i Callithrix_jacchus.pat_scaffold_3                      I 2 I 1
s Callithrix_kuhlii.k119_1164682                              9844  5 -     12001 a----a-----a-------a----a-
i Callithrix_kuhlii.k119_1164682                         I 2 I 1
s Camelus_bactrianus.KN276810.1                           10001256  5 -  17673402 g----g-----g-------a----a-
i Camelus_bactrianus.KN276810.1                          C 0 I 1
s Camelus_dromedarius.KN272107.1                           2333714  5 -   7040546 g----g-----g-------a----a-
i Camelus_dromedarius.KN272107.1                         C 0 I 1
s Camelus_ferus.KB017975.1                                  401996  5 -   1652518 g----g-----g-------a----a-
i Camelus_ferus.KB017975.1                               C 0 I 1
s Carlito_syrichta.NW_007259797.1                           154412  5 -    496798 g----c-----a-------a----a-
i Carlito_syrichta.NW_007259797.1                        C 0 I 1
s Carollia_perspicillata.CarPer_scaffold_92756                3700  4 -     11696 g-g--a-----a--------------
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 2
s Catagonus_wagneri.CatWag_scaffold_2839                     91853  5 +    217609 a----g-----g-------a----a-
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 1
s Cebuella_niveiventris.k141_1251222                          7754  5 -     11392 a----a-----a-------a----a-
i Cebuella_niveiventris.k141_1251222                     I 2 I 1
s Cebuella_pygmaea.k141_1309012                               3852  5 -      7577 a----a-----a-------a----a-
i Cebuella_pygmaea.k141_1309012                          I 2 I 1
s Cebus_olivaceus.k141_1000828                                1790  5 -      2944 a----a-----a-------a----a-
i Cebus_olivaceus.k141_1000828                           I 2 I 1
s Cephalopachus_bancanus.k141_1423433                         3923  5 +     31688 g----c-----a-------a----a-
i Cephalopachus_bancanus.k141_1423433                    C 0 I 1
s Ceratotherium_simum.JH767749.1                          12230281  5 +  27778364 g----g-----g-------a----c-
i Ceratotherium_simum.JH767749.1                         C 0 I 3
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1308  5 -     25243 g----g-----g-------a----c-
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 I 3
s Cercocebus_atys.KQ010504.1                               4473405  3 +   4669795 -----------a-------a----a-
i Cercocebus_atys.KQ010504.1                             I 1 I 1
s Cercocebus_chrysogaster.k141_393940                        11954  3 -     19203 -----------a-------a----a-
i Cercocebus_chrysogaster.k141_393940                    I 2 I 1
s Cercocebus_lunulatus.k141_3846941                           6376  3 +      8260 -----------a-------a----a-
i Cercocebus_lunulatus.k141_3846941                      I 2 I 1
s Cercocebus_torquatus.k141_3057011                           6602  3 +     27781 -----------a-------a----a-
i Cercocebus_torquatus.k141_3057011                      I 2 I 1
s Cheirogaleus_major.k141_333249                             19528  1 -     52598 ------------------------a-
i Cheirogaleus_major.k141_333249                         C 0 I 1
s Cheirogaleus_medius.k141_1055463                           14879  1 +     57038 ------------------------a-
i Cheirogaleus_medius.k141_1055463                       C 0 I 1
s Cercopithecus_ascanius.k141_1024104                         6758  5 -     20310 aa---a-----a-------a------
i Cercopithecus_ascanius.k141_1024104                    C 0 I 1
s Cercopithecus_cephus.k141_1078548                           9737  5 +     29689 aa---a-----a-------a------
i Cercopithecus_cephus.k141_1078548                      C 0 I 1
s Cercopithecus_diana.k141_2427854                            4168  5 +      9989 aa---a-----a-------a------
i Cercopithecus_diana.k141_2427854                       C 0 I 1
s Cercopithecus_hamlyni.k141_187466                          12416  5 -     27936 aa---a-----a-------a------
i Cercopithecus_hamlyni.k141_187466                      C 0 I 1
s Cercopithecus_lowei.k141_1854285                            1292  6 -     17152 aa---aa----a-------a------
i Cercopithecus_lowei.k141_1854285                       C 0 I 1
s Cercopithecus_albogularis.ctg5                                38814820  5 +  39242232 aa---a-----a-------c------
i Cercopithecus_albogularis.ctg5                               C 0 I 1
s Cercopithecus_mona.ctg39                                21220521  6 -  21565898 aa---aa----a-------a------
i Cercopithecus_mona.ctg39                               C 0 I 1
s Cercopithecus_neglectus.k141_2526306                       37640  5 -     53127 aa---a-----a-------a------
i Cercopithecus_neglectus.k141_2526306                   C 0 I 1
s Cercopithecus_nictitans.k141_3278028                        4900  5 +      7159 aa---a-----a-------a------
i Cercopithecus_nictitans.k141_3278028                   C 0 I 1
s Cercopithecus_petaurista.k141_807961                       12443  5 -     27947 aa---a-----a-------a------
i Cercopithecus_petaurista.k141_807961                   C 0 I 1
s Cercopithecus_pogonias.k141_822820                         12416  5 +     17596 aa---a-----a-------a------
i Cercopithecus_pogonias.k141_822820                     C 0 I 1
s Cercopithecus_roloway.k141_2567858                          1639  5 +     26000 aa---a-----a-------a------
i Cercopithecus_roloway.k141_2567858                     C 0 I 1
s Chaetophractus_vellerosus.ChaVel_scaffold_229060            6301  4 -      6351 a----a-----a-------a------
i Chaetophractus_vellerosus.ChaVel_scaffold_229060       I 3 N 0
s Chlorocebus_aethiops.ctg25                              18426387  7 -  18827391 aa---a-----aa------a----a-
i Chlorocebus_aethiops.ctg25                             C 0 I 1
s Chlorocebus_pygerythrus.k141_1025673                       12825  6 -     50209 aa---a-----a-------a----a-
i Chlorocebus_pygerythrus.k141_1025673                   C 0 I 1
s Chlorocebus_sabaeus.CM001947.1                         135419825  6 + 135778131 aa---a-----a-------a----a-
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 1
s Choloepus_didactylus.ChoDid_scaffold_45914                 16706  5 +     19366 a----a-----a-------g----g-
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 I 1
s Choloepus_hoffmanni.KN194906.1                            171805  5 +    839153 a----a-----a-------g----g-
i Choloepus_hoffmanni.KN194906.1                         C 0 I 1
s Chrysochloris_asiatica.ChrAsi_scaffold_2561901               333  3 -       464 g----a-----g--------------
i Chrysochloris_asiatica.ChrAsi_scaffold_2561901         C 0 C 0
s Colobus_angolensis.KN981557.1                            1908341  5 +   2368649 a----a-----a-------a----a-
i Colobus_angolensis.KN981557.1                          C 0 I 1
s Colobus_guereza.LG01                                   199948017  5 + 200372422 a----a-----a-------a----a-
i Colobus_guereza.LG01                                   C 0 I 1
s Colobus_polykomos.k141_906115                              34879  5 +     84244 a----a-----a-------a----a-
i Colobus_polykomos.k141_906115                          C 0 I 1
s Craseonycteris_thonglongyai.CraTho_scaffold_49039            355  6 +     23735 aa---a-----a-------c----a-
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      n 7 I 88
s Crocidura_indochinensis.CroInd_scaffold_37019               1630  5 -     19598 A----A-----A-------G----C-
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27326  9 -     87169 g-ggag-----aa------a----a-
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 1
s Daubentonia_madagascariensis.ctg71                      12535742  1 -  12879189 ------------------------g-
i Daubentonia_madagascariensis.ctg71                     C 0 I 1
s Desmodus_rotundus.KZ672289.1                             8628732  4 +  20541912 g-g--a-----a--------------
i Desmodus_rotundus.KZ672289.1                           C 0 I 2
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672131  5 +   1390856 g----g-----g-------a----a-
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 3
s Diceros_bicornis.DicBicMic_scaffold_5955                    4884  5 +    198055 g----g-----g-------a----c-
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 3
s Eidolon_helvum.KE759718.1                                   9364  6 +     11740 ga---g-----a-------a----a-
i Eidolon_helvum.KE759718.1                              C 0 I 1
s Enhydra_lutris.KZ291758.1                               16328166  5 -  41312741 g-gg-g-----g--------------
i Enhydra_lutris.KZ291758.1                              I 1 I 1
s Equus_asinus.JREZ01000139.1                              1282193  5 +   4378816 g----g-----g-------g----g-
i Equus_asinus.JREZ01000139.1                            C 0 I 3
s Equus_caballus.CM000403.2                               18530014  5 -  39960074 g----g-----g-------g----a-
i Equus_caballus.CM000403.2                              C 0 I 3
s Equus_przewalskii.KK951119.1                               32029  5 +    498745 g----g-----g-------g----a-
i Equus_przewalskii.KK951119.1                           C 0 I 3
s Eulemur_albifrons.k141_342033                              12223  1 -     14127 ------------------------a-
i Eulemur_albifrons.k141_342033                          C 0 I 1
s Eulemur_collaris.k141_377015                                4921  1 -     16928 ------------------------a-
i Eulemur_collaris.k141_377015                           C 0 I 1
s Eulemur_coronatus.k141_885031                              13958  1 -     25546 ------------------------a-
i Eulemur_coronatus.k141_885031                          C 0 I 1
s Eulemur_flavifrons.k141_1184614                            11148  1 +     26330 ------------------------a-
i Eulemur_flavifrons.k141_1184614                        C 0 I 1
s Eulemur_fulvus.k141_544389                                 12387  1 +     23973 ------------------------a-
i Eulemur_fulvus.k141_544389                             C 0 I 1
s Eulemur_macaco.k141_1562045                                11148  1 +     75513 ------------------------a-
i Eulemur_macaco.k141_1562045                            C 0 I 1
s Eulemur_mongoz.k141_232305                                  9090  1 +     97555 ------------------------a-
i Eulemur_mongoz.k141_232305                             C 0 I 1
s Eulemur_rubriventer.k141_571033                            12026  1 +     26496 ------------------------a-
i Eulemur_rubriventer.k141_571033                        C 0 I 1
s Eulemur_rufus.k141_1476633                                  2623  1 -     17153 ------------------------a-
i Eulemur_rufus.k141_1476633                             C 0 I 1
s Eulemur_sanfordi.k141_1122526                              12199  1 +    111500 ------------------------a-
i Eulemur_sanfordi.k141_1122526                          C 0 I 1
s Erythrocebus_patas.Contig38                             21203015  3 -  21539334 aa---a--------------------
i Erythrocebus_patas.Contig38                            C 0 I 3
s Felis_catus.CM001381.2                                  20236020  8 + 206538554 gagg-g-----g-------g----g-
i Felis_catus.CM001381.2                                 C 0 I 1
s Felis_catus_fca126.CM031415.1                           20194863  8 + 205367284 gagg-g-----g-------g----g-
i Felis_catus_fca126.CM031415.1                          C 0 I 1
s Felis_nigripes.FelNig_flattened_line_20823                  8377  8 -     36744 gagg-g-----g-------g----g-
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 1
s Galeopterus_variegatus.GalVar_scaffold_197845               2474  5 -      3123 g----g-----g-------a----a-
i Galeopterus_variegatus.GalVar_scaffold_197845          C 0 I 1
s Gorilla_beringei.k141_3596273                              13786  5 -     32273 a----a-----a-------a----a-
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186335934  5 + 186649187 a----a-----a-------a----a-
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           5279  1 -     19426 ------------------------g-
i Hapalemur_alaotrensis.k141_170648                      C 0 I 1
s Hapalemur_gilberti.k141_488810                             10428  1 -     15286 ------------------------g-
i Hapalemur_gilberti.k141_488810                         C 0 I 1
s Hapalemur_griseus.k141_1511508                             12067  1 +     18253 ------------------------g-
i Hapalemur_griseus.k141_1511508                         C 0 I 1
s Hapalemur_meridionalis.k141_248335                         12168  1 -     41752 ------------------------g-
i Hapalemur_meridionalis.k141_248335                     C 0 I 1
s Hapalemur_occidentalis.k141_907772                         12006  1 -     16460 ------------------------g-
i Hapalemur_occidentalis.k141_907772                     C 0 I 1
s Helogale_parvula.HelPar_flattened_line_2585               241166  9 +    327341 g-ggag-----aa------a----a-
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 1
s Heterohyrax_brucei.HetBruBak_scaffold_403422                 481  5 -       893 a----a-----g-------a----a-
i Heterohyrax_brucei.HetBruBak_scaffold_403422           C 0 I 1
s Hipposideros_armiger.JXIK01000431.1                       110636  6 +   1711038 g-g--g-----g-------a----a-
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 1
s Hipposideros_galeritus.HipGal_scaffold_29171               42062  6 +     43066 g-g--g-----g-------a----a-
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 I 1
s Hoolock_leuconedys.ctg274                                    432597  5 +    630532 a----a-----a-------a----a-
i Hoolock_leuconedys.ctg274                                 C 0 I 1
s Hyaena_hyaena.HyaHya_flattened_line_26932                  43303  9 +     55795 g-ggag-----aa------a----a-
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 1
s Hylobates_agilis.k141_232023                                 363  5 -     12752 a----a-----a-------a----a-
i Hylobates_agilis.k141_232023                           C 0 I 1
s Hylobates_klossii.k141_240831                                407  5 +     14092 a----a-----a-------a----a-
i Hylobates_klossii.k141_240831                          C 0 I 1
s Hylobates_pileatus_b.LG02                                     189541190  5 - 191637585 a----a-----a-------a----a-
i Hylobates_pileatus_b.LG02                                     C 0 I 1
s Hylobates_pileatus_a.tarseq_633                            3334084  5 -  11177569 a----a-----a-------a----a-
i Hylobates_pileatus_a.tarseq_633                          C 0 I 1
s Indri_indri.k141_3655594                                   20971  1 +     31101 ------------------------a-
i Indri_indri.k141_3655594                               C 0 I 1
s Lemur_catta.scaffold_24                                 15522511  1 -  30322482 ------------------------g-
i Lemur_catta.scaffold_24                                C 0 I 1
s Leontocebus_fuscicollis.k141_1820339                        5474  4 +     64341 -----a-----a-------a----a-
i Leontocebus_fuscicollis.k141_1820339                   I 2 I 1
s Leontocebus_illigeri.k141_3350179                           2535  4 +      4941 -----a-----a-------a----a-
i Leontocebus_illigeri.k141_3350179                      I 2 I 1
s Leontocebus_nigricollis.k141_4610752                        5403  4 +     35603 -----a-----a-------a----a-
i Leontocebus_nigricollis.k141_4610752                   I 2 I 1
s Leontopithecus_chrysomelas.k141_1519602                    26890  5 +     38576 a----a-----a-------a----a-
i Leontopithecus_chrysomelas.k141_1519602                I 2 I 1
s Leontopithecus_rosalia.k141_464620                         23587  5 +     66356 a----a-----a-------a----a-
i Leontopithecus_rosalia.k141_464620                     I 2 I 1
s Lepilemur_ankaranensis.k141_596936                          9418  1 -     23766 ------------------------a-
i Lepilemur_ankaranensis.k141_596936                     C 0 I 1
s Lepilemur_dorsalis.k141_577674                             27484  1 +     45836 ------------------------a-
i Lepilemur_dorsalis.k141_577674                         C 0 I 1
s Lepilemur_ruficaudatus.k141_667017                          2020  1 -      2151 ------------------------a-
i Lepilemur_ruficaudatus.k141_667017                     C 0 I 1
s Lepilemur_septentrionalis.k141_185316                      25420  1 +     54090 ------------------------a-
i Lepilemur_septentrionalis.k141_185316                  C 0 I 1
s Leptonychotes_weddellii.KB714746.1                       3041702  7 +   3914936 a----g-----t--g---gg----g-
i Leptonychotes_weddellii.KB714746.1                     C 0 I 1
s Lepus_americanus.LepAme_scaffold_107385                     4381  9 -     14121 g----aatga-a-------c----a-
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 1
s Lophocebus_aterrimus.ctg367                              1434952  3 +   1826925 -----------a-------a----a-
i Lophocebus_aterrimus.ctg367                            I 2 I 1
s Loxodonta_africana.GL010049.1                            4215822  9 -  43346337 g----a-----g-------agggga-
i Loxodonta_africana.GL010049.1                          C 0 I 1
s Macaca_arctoides.k141_2326796                               4767  3 +     40492 -----------a-------a----a-
i Macaca_arctoides.k141_2326796                          I 2 I 1
s Macaca_assamensis.Contig5                               59674029  3 +  60120075 -----------a-------a----a-
i Macaca_assamensis.Contig5                              I 2 I 1
s Macaca_cyclopis.k119_18836                                 10523  3 -     26193 -----------a-------a----a-
i Macaca_cyclopis.k119_18836                             I 2 I 1
s Macaca_fascicularis.k141_814140                            78327  3 -    114318 -----------a-------a----a-
i Macaca_fascicularis.k141_814140                        I 2 I 1
s Macaca_fuscata.k119_255327                                  4026  3 -     23192 -----------a-------a----a-
i Macaca_fuscata.k119_255327                             I 2 I 1
s Macaca_leonina.k141_3550399                                13487  3 -     29190 -----------a-------a----a-
i Macaca_leonina.k141_3550399                            I 3 I 1
s Macaca_maura.k141_2733130                                  22054  3 +     37952 -----------a-------a----a-
i Macaca_maura.k141_2733130                              I 2 I 1
s Macaca_mulatta.NC_041758.1                             186837142  3 + 187317192 -----------a-------a----a-
i Macaca_mulatta.NC_041758.1                             I 2 I 1
s Macaca_nemestrina.KQ007038.1                            25455705  3 -  25927173 -----------a-------a----a-
i Macaca_nemestrina.KQ007038.1                           I 2 C 0
s Macaca_nigra.k141_1655396                                  77903  3 +     89720 -----------a-------a----a-
i Macaca_nigra.k141_1655396                              I 2 I 1
s Macaca_radiata.k141_3680011                                 4900  3 +     20474 -----------a-------a----a-
i Macaca_radiata.k141_3680011                            I 2 I 1
s Macaca_siberu.k141_635500                                   4701  3 -     14993 -----------a-------a----a-
i Macaca_siberu.k141_635500                              I 2 I 1
s Macaca_silenus.Contig273                                  327572  3 -    668171 -----------a-------a----a-
i Macaca_silenus.Contig273                               I 2 I 1
s Macaca_thibetana.k99_256239                                 3012  3 -     24072 -----------a-------a----a-
i Macaca_thibetana.k99_256239                            I 2 I 1
s Macaca_tonkeana.k141_1498238                               23641  3 -     45290 -----------a-------a----a-
i Macaca_tonkeana.k141_1498238                           I 2 I 1
s Macroglossus_sobrinus.MacSob_scaffold_8222                 89457  6 +     94391 g-g--a-----a-------a----a-
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 1
s Mandrillus_leucophaeus.scaffold280                      23935225  3 -  24302211 -----------a-------a----a-
i Mandrillus_leucophaeus.scaffold280                     I 2 I 1
s Mandrillus_sphinx.Contig270                               349357  3 +    752769 -----------a-------a----a-
i Mandrillus_sphinx.Contig270                            I 2 I 1
s Manis_javanica.JSZB01003497.1                              18309  5 +    737560 G----G-----G-------G----A-
i Manis_javanica.JSZB01003497.1                          C 0 I 1
s Manis_pentadactyla.KN006162.1                              49693  5 -    317179 g----g-----g-------g----G-
i Manis_pentadactyla.KN006162.1                          C 0 I 606
s Megaderma_lyra.MegLyr_scaffold_4542                        13454  6 -    207569 aa---a-----a-------c----a-
i Megaderma_lyra.MegLyr_scaffold_4542                    I 4275 T 4270
s Mellivora_capensis.MelCap_flattened_line_69365              8881  7 +     13704 t----g-----g--g---gg----g-
i Mellivora_capensis.MelCap_flattened_line_69365         I 2 I 1
s Mico_argentatus.k141_1239457                                3676  5 -      7380 a----a-----a-------a----a-
i Mico_argentatus.k141_1239457                           I 2 I 1
s Mico_humeralifer.k141_1976199                               2742  5 +     18990 a----a-----a-------a----a-
i Mico_humeralifer.k141_1976199                          I 2 I 1
s Mico_schneideri.k141_1950671                                      3681  5 -      7356 a----a-----a-------a----a-
i Mico_schneideri.k141_1950671                                 I 2 I 1
s Microcebus_murinus.CM007674.1                           18289920  1 -  93316391 ------------------------a-
i Microcebus_murinus.CM007674.1                          C 0 I 1
s Micronycteris_hirsuta.MicHir_scaffold_52381                14246  4 -     19307 g-g--a-----a--------------
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 2
s Miopithecus_ogouensis.k141_534055                           6946  5 -     28506 aa---a-----a-------a------
i Miopithecus_ogouensis.k141_534055                      C 0 I 1
s Mirounga_angustirostris.MirAng_flattened_line_93702         4570  7 -      8324 a----g-----t--g---gg----g-
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 1
s Mirza_zaza.k141_952172                                      7492  1 -     37649 ------------------------a-
i Mirza_zaza.k141_952172                                 C 0 I 1
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140158  4 -    366855 g-g--g-----g--------------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 2
s Mungos_mungo.MunMun_flattened_line_23663                   34278  9 +     37127 g-ggag-----aa------a----a-
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 1
s Mustela_putorius.JH418006.1                               300059  9 -  14710649 t-gg-g-----g--g---ga----a-
i Mustela_putorius.JH418006.1                            I 1 I 1
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187632  5 +    196477 a----a-----a-------a----c-
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 I 1
s Nasalis_larvatus.k141_413338                               12942  5 +     21681 a----a-----a-------a----a-
i Nasalis_larvatus.k141_413338                           C 0 I 1
s Ochotona_princeps.JH802162.1                             1361434  9 +   3988456 a----ga-gcta-------a----a-
i Ochotona_princeps.JH802162.1                           C 0 I 1
s Odobenus_rosmarus.KB229312.1                              505509  7 -   2017862 g----g-----g--g---gg----g-
i Odobenus_rosmarus.KB229312.1                           C 0 I 1
s Oryctolagus_cuniculus.CM000791.1                        67145226  9 + 174332312 g----aatgt-a-------c----a-
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 1
s Pan_troglodytes.CM009242.2                             189140794  6 + 189151597 a----a-----a-------a----aa
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  150030  8 +    230217 gagg-g-----g-------g----g-
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 1
s Panthera_pardus.KV860321.1                                263235  8 +  18783137 gagg-g-----g-------g----g-
i Panthera_pardus.KV860321.1                             C 0 I 1
s Panthera_tigris.KE722367.1                               4719873  8 -   8748460 gagg-g-----g-------g----g-
i Panthera_tigris.KE722367.1                             C 0 I 1
s Papio_anubis.CM001495.2                                183440980  2 + 183742232 -------------------a----a-
i Papio_anubis.CM001495.2                                I 2 I 1
s Papio_cynocephalus.k141_4307930                             4673  3 +     20448 -----------a-------a----a-
i Papio_cynocephalus.k141_4307930                        I 2 I 1
s Papio_hamadryas.Contig39                                20561479  5 +  20919399 -----------aaa-----a----a-
i Papio_hamadryas.Contig39                               I 2 I 1
s Papio_kindae.k141_1936966                                   3417  3 +     41871 -----------a-------a----a-
i Papio_kindae.k141_1936966                              I 2 I 1
s Papio_papio.k141_802527                                     6703  2 +     27711 -------------------a----a-
i Papio_papio.k141_802527                                I 2 I 1
s Papio_ursinus.k141_3428135                                  6782  3 +      9205 -----------a-------a----a-
i Papio_ursinus.k141_3428135                             I 2 I 1
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11493  3 -     78924 -----------g-------g----g-
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 4 I 1
s Piliocolobus_badius.k141_1234363                           41448  5 +     62158 a----a-----a-------a----a-
i Piliocolobus_badius.k141_1234363                       C 0 I 1
s Piliocolobus_gordonorum.k141_381342                        36178  6 +     89929 a----a-----aa------a----a-
i Piliocolobus_gordonorum.k141_381342                    C 0 I 1
s Piliocolobus_kirkii.k141_448987                            37594  6 +     51399 a----a-----aa------a----a-
i Piliocolobus_kirkii.k141_448987                        C 0 I 1
s Piliocolobus_tephrosceles.PDMG02000141.1                14293832  6 -  14605196 a----a-----aa------a----a-
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 1
s Pongo_abelii.CM009266.2                                189128914  5 + 189387572 a----a-----a-------a----a-
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9568522  5 +   9816681 a----a-----a-------a----a-
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               71110  5 -     81375 a----a-----a-------a----a-
i Presbytis_comata.k141_677006                           C 0 I 1
s Presbytis_mitrata.k141_1087752                              2930  5 +     19060 a----a-----a-------a----a-
i Presbytis_mitrata.k141_1087752                         C 0 I 1
s Procavia_capensis.ProCapCap_scaffold_85530                 11474  5 -     22811 a----a-----g-------a----a-
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 I 1
s Prolemur_simus.MPIZ01000396.1                            2595179  1 -   4620579 ------------------------c-
i Prolemur_simus.MPIZ01000396.1                          C 0 I 1
s Propithecus_coquerelli.NW_012148875.1                     989173  1 +   2598838 ------------------------a-
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 1
s Propithecus_coronatus.k141_347390                          27483  1 +     38485 ------------------------a-
i Propithecus_coronatus.k141_347390                      C 0 I 1
s Propithecus_diadema.k141_357118                             3643  1 +      4256 ------------------------a-
i Propithecus_diadema.k141_357118                        C 0 I 1
s Propithecus_edwardsi.k141_1176054                          24996  1 +     35766 ------------------------a-
i Propithecus_edwardsi.k141_1176054                      C 0 I 1
s Propithecus_perrieri.k141_1200571                           3179  1 -     24134 ------------------------a-
i Propithecus_perrieri.k141_1200571                      C 0 I 1
s Propithecus_tattersalli.k141_790011                        27000  1 -     67325 ------------------------a-
i Propithecus_tattersalli.k141_790011                    C 0 I 1
s Propithecus_verreauxi.k141_956661                           3236  1 -      6182 ------------------------a-
i Propithecus_verreauxi.k141_956661                      C 0 I 1
s Pteronotus_parnellii.KE909381.1                            13538  4 -     21811 g-g--t-----g--------------
i Pteronotus_parnellii.KE909381.1                        I 4 I 2
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39076 11 +     42204 t-gg-g-----ggtg-c--g----g-
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 1 I 1
s Pteropus_alecto.KB030862.1                              22975627  6 +  28871421 g-g--g-----a-------a----a-
i Pteropus_alecto.KB030862.1                             C 0 I 1
s Pteropus_vampyrus.KN525825.1                             1358716  6 +   4952924 g-g--g-----a-------a----a-
i Pteropus_vampyrus.KN525825.1                           C 0 I 1
s Puma_concolor.QAVW01001104.1                            20273149  8 -  38429054 gagg-g-----g-------g----g-
i Puma_concolor.QAVW01001104.1                           C 0 I 1
s Pygathrix_cinerea.k141_1153803                             12940  6 -     91421 aa---a-----a-------a----a-
i Pygathrix_cinerea.k141_1153803                         C 0 I 1
s Pygathrix_nigripes_b.ctg100                                 7607066  6 +   7812017 aa---a-----a-------a----a-
i Pygathrix_nigripes_b.ctg100                               C 0 I 1
s Pygathrix_nigripes_a.k141_215492                             12914  6 -     72585 aa---a-----a-------a----a-
i Pygathrix_nigripes_a.k141_215492                         C 0 I 1
s Rhinopithecus_bieti.k119_217274                             4624  3 -     11128 -----------a-------a----a-
i Rhinopithecus_bieti.k119_217274                        I 3 I 1
s Rhinopithecus_roxellana.NC_044550.1                     91233976  7 - 195417433 aa-a-a-----a-------a----a-
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 1
s Rhinopithecus_strykeri.ctg102                            7669625  7 +   7961872 aa-a-a-----a-------a----a-
i Rhinopithecus_strykeri.ctg102                          C 0 I 1
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                86638  6 -     96226 g-g--g-----g-------a----a-
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 1
s Saguinus_bicolor.k141_2619299                               5788  4 -      8359 -----a-----a-------a----a-
i Saguinus_bicolor.k141_2619299                          I 2 I 1
s Saguinus_geoffroyi.k141_1413670                            12070  4 -     13588 -----A-----a-------a----a-
i Saguinus_geoffroyi.k141_1413670                        I 2 I 1
s Saguinus_imperator.k141_717981                              5731  4 -      6207 -----a-----a-------a----a-
i Saguinus_imperator.k141_717981                         I 2 I 1
s Saguinus_inustus.k141_699149                               11458  4 +     13640 -----a-----a-------a----a-
i Saguinus_inustus.k141_699149                           I 2 I 1
s Saguinus_labiatus.k141_285685                               6320  4 +      8564 -----a-----a-------a----a-
i Saguinus_labiatus.k141_285685                          I 2 I 1
s Saguinus_midas.LG03                                    209466602  4 + 209938924 -----a-----a-------a----a-
i Saguinus_midas.LG03                                    I 2 I 1
s Saguinus_mystax.k141_374627                                 5808  4 -      9399 -----a-----a-------a----a-
i Saguinus_mystax.k141_374627                            I 2 I 1
s Saguinus_oedipus.k141_63850                                 2935  4 +      3421 -----a-----a-------a----a-
i Saguinus_oedipus.k141_63850                            I 2 I 1
s Saimiri_boliviensis.NW_024100920.1                     119949153  5 - 121099817 a----a-----a-------a----a-
i Saimiri_boliviensis.NW_024100920.1                     I 2 I 1
s Saimiri_cassiquiarensis.k141_2188234                       21607  5 +     46362 a----a-----a-------a----a-
i Saimiri_cassiquiarensis.k141_2188234                   I 2 I 1
s Saimiri_macrodon.k141_716185                               21702  5 +     45824 a----a-----a-------a----a-
i Saimiri_macrodon.k141_716185                           I 2 I 1
s Saimiri_oerstedii.k141_1487881                             38330  5 -     64574 a----a-----a-------a----a-
i Saimiri_oerstedii.k141_1487881                         I 2 I 1
s Saimiri_sciureus.k141_2278166                               1336  5 -     23631 a----a-----a-------a----a-
i Saimiri_sciureus.k141_2278166                          I 2 I 1
s Saimiri_ustus.k141_1484609                                 21595  5 -     61129 a----a-----a-------a----a-
i Saimiri_ustus.k141_1484609                             I 2 I 1
s Semnopithecus_entellus.k141_11662                          17447  5 -     19888 a----a-----a-------a----a-
i Semnopithecus_entellus.k141_11662                      C 0 I 1
s Semnopithecus_hypoleucos.k141_1615806                      24650  5 +     39453 a----a-----a-------a----a-
i Semnopithecus_hypoleucos.k141_1615806                  C 0 I 1
s Semnopithecus_johnii.k141_670120                            5176  5 +     27826 a----a-----a-------a----a-
i Semnopithecus_johnii.k141_670120                       C 0 I 1
s Semnopithecus_priam.k141_638794                             4696  5 -     19483 a----a-----a-------a----a-
i Semnopithecus_priam.k141_638794                        C 0 I 1
s Semnopithecus_schistaceus.k141_1584426                      4758  5 +      7198 a----a-----a-------a----a-
i Semnopithecus_schistaceus.k141_1584426                 C 0 I 1
s Semnopithecus_vetulus.k141_1200928                         13018  5 +     15514 a----a-----a-------a----a-
i Semnopithecus_vetulus.k141_1200928                     C 0 I 1
s Solenodon_paradoxus.SolPar_flattened_line_126               2619  5 +   1910179 G----T-----A-------A----A-
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 1
s Sorex_araneus.JH798187.1                                13649664  5 -  18376816 A----G-----A-------G----T-
i Sorex_araneus.JH798187.1                               C 0 I 1
s Spilogale_gracilis.SpiGra_flattened_line_13525             29588  7 +     97271 g----g-----a--ga---g----a-
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 1
s Suricata_suricatta.SurSur_flattened_line_6629              17166 10 -    196729 g-ggag-----aa------a---aa-
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 1
s Sus_scrofa.JH118708.1                                      34368  5 -     47482 g----g-----g-------a----a-
i Sus_scrofa.JH118708.1                                  C 0 I 1
s Symphalangus_syndactylus.tarseq_199                      1091232  5 -   1523678 a----a-----a-------a----a-
i Symphalangus_syndactylus.tarseq_199                    C 0 I 1
s Tadarida_brasiliensis.TadBra_scaffold_25820                 9480  6 +     41958 g-g--g-----g-------g----g-
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 3
s Tamandua_tetradactyla.TamTet_scaffold_1782                 70984  5 +    116680 a----a-----a-------a----c-
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 I 1
s Tapirus_indicus.TapInd_scaffold_9301                      117604  5 -    156842 g----g-----g-------a----a-
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 3
s Tapirus_terrestris.TapTer_scaffold_755                    386057  5 +    539355 g----g-----g-------a----a-
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 3
s Tarsius_lariang.k141_2201908                               24534  5 +     70052 g----t-----a-------a----a-
i Tarsius_lariang.k141_2201908                           C 0 I 1
s Tarsius_wallacei.k141_2029956                               3874  5 +      4644 g----t-----a-------a----a-
i Tarsius_wallacei.k141_2029956                          C 0 I 1
s Theropithecus_gelada.CM009954.1                        186426345  3 + 186847797 -----------a-------a----a-
i Theropithecus_gelada.CM009954.1                        I 2 I 1
s Tolypeutes_matacus.TolMat_scaffold_228639                   3548  6 +      8208 a----a-----aa------a----a-
i Tolypeutes_matacus.TolMat_scaffold_228639              I 3 I 1
s Tonatia_saurophila.TonSau_scaffold_294                     79787  4 +    610378 g-g--g-----a--------------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 2
s Trachypithecus_auratus.k141_722599                          8749  5 -     20410 a----a-----a-------a----a-
i Trachypithecus_auratus.k141_722599                     C 0 I 1
s Trachypithecus_crepusculus.k141_1194022                    12943  5 +     15221 a----a-----a-------a----a-
i Trachypithecus_crepusculus.k141_1194022                C 0 I 1
s Trachypithecus_cristatus.k141_580354                        8850  5 +     19930 a----a-----a-------a----a-
i Trachypithecus_cristatus.k141_580354                   C 0 I 1
s Trachypithecus_francoisi.k141_1412647                       5279  5 -     19997 a----a-----a-------a----a-
i Trachypithecus_francoisi.k141_1412647                  C 0 I 1
s Trachypithecus_geei.k141_277701                            45400  5 -     60166 a----a-----a-------a----a-
i Trachypithecus_geei.k141_277701                        C 0 I 1
s Trachypithecus_germaini.k141_912491                        12872  5 -     27529 a----a-----a-------a----a-
i Trachypithecus_germaini.k141_912491                    C 0 I 1
s Trachypithecus_hatinhensis.k141_143409                     12813  5 -     18194 a----a-----a-------a----a-
i Trachypithecus_hatinhensis.k141_143409                 C 0 I 1
s Trachypithecus_laotum.k141_907409                           6546  5 -     21137 a----a-----a-------a----a-
i Trachypithecus_laotum.k141_907409                      C 0 I 1
s Trachypithecus_leucocephalus.k141_587342                    5249  5 -     10723 a----a-----a-------a----a-
i Trachypithecus_leucocephalus.k141_587342               C 0 I 1
s Trachypithecus_melamera.k141_434728                         4401  5 +      9834 a----a-----a-------a----a-
i Trachypithecus_melamera.k141_434728                    C 0 I 1
s Trachypithecus_obscurus.k141_190785                        22717  5 +     32220 a----a-----a-------a----a-
i Trachypithecus_obscurus.k141_190785                    C 0 I 1
s Trachypithecus_phayrei.ctg124                            5936816  5 +   6242583 a----a-----a-------a----a-
i Trachypithecus_phayrei.ctg124                          C 0 I 1
s Trachypithecus_pileatus.k141_2007326                        6065  5 +     20839 a----a-----a-------a----a-
i Trachypithecus_pileatus.k141_2007326                   C 0 I 1
s Tupaia_chinensis.KB320699.1                              2154075 12 +   4065304 g----a-----aaagacaaa----a-
i Tupaia_chinensis.KB320699.1                            C 0 I 1
s Tupaia_tana.TupTan_flattened_line_97126                     7732 12 -     10553 g----a-----aaagacaaa----a-
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 1
s Ursus_maritimus.KK499267.1                               4849279  5 -   5085361 g----g-----g-------a----a-
i Ursus_maritimus.KK499267.1                             C 0 I 1
s Varecia_rubra.k141_590885                                   9844  1 +     50397 ------------------------c-
i Varecia_rubra.k141_590885                              C 0 I 1
s Varecia_variegata.k141_1128296                              9899  1 +     24756 ------------------------c-
i Varecia_variegata.k141_1128296                         C 0 I 1
s Vicugna_pacos.KN270157.1                                 5370743  5 -   5488506 g----g-----g-------a----a-
i Vicugna_pacos.KN270157.1                               C 0 I 1
s Zalophus_californianus.ZalCal_flattened_line_17732          4003  7 +     86975 g----t-----g--g---ga----a-
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 1
e Echinops_telfairi.JH980293.1                            48778276  0 + 111700974 C
e Otolemur_garnettii.GL873799.1                             694317  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         2153  0 +      8798 C
e Galago_senegalensis.k141_631886                             2318  0 +     11339 C
e Galago_moholi.ctg2040                                     424611  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Chiropotes_albinasus.k141_2813271                           8451 841 +     11226 I
e Cebus_unicolor.k141_219506                                 14903  0 -     16904 I
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Mus_pahari.LT608297.1                                   31352818  0 -  89631738 C
e Mus_spretus.CM004101.1                                  90750234  0 - 130317789 C
e Mus_musculus.chr8                                       87648156  0 - 129401213 C
e Mus_caroli.LT608237.1                                   84359172  0 - 120012414 C
e Loris_tardigradus.ctg83                                  1002909  0 +   6120653 C
e Loris_lydekkerianus.k141_2539221                            4070  0 +     11245 C
e Perodicticus_potto.k141_1092580                             6662  0 +     25941 C
e Perodicticus_ibeanus.k141_855320                            8284  0 +     13100 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Xerus_inauris.XerIna_scaffold_48378                        22715  0 -     24430 C
e Vulpes_lagopus.VulLag_flattened_line_30954                  9730  0 -     43706 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   52652  8 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Spermophilus_dauricus.KZ294078.1                         1951468 299 -   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11304  0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152480  8 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rattus_norvegicus.chr16                                 53568239  0 +  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Psammomys_obesus.NESX01036370.1                             8401  0 -     21651 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18191985  0 -  18517816 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Pan_paniscus.KQ411613.1                                    41837 195 +     80009 I
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       461284  0 -    559221 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7577 1418 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    77382  0 +    102263 C
e Ondatra_zibethicus.OndZib_scaffold_46174                   22267 24 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105748257  0 + 199412804 C
e Nycticebus_coucang.k141_5327727                             5516  0 +      8486 C
e Nycticebus_bengalensis.LG01                            102577830  0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9148320  0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11258701  7 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    18126  0 -    145209 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12180532  2 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 30759  0 +    140813 C
e Marmota_marmota.CZRN01000018.1                          33100580 298 -  40650429 I
e Lycaon_pictus.CM007581.1                                17954062  0 -  59628241 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Ictidomys_tridecemlineatus.JH393364.1                    7518272 302 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Galagoides_demidoff.k141_1959596                            6126  0 +      6795 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Ellobius_talpinus.LOJH01109367.1                            3704  7 -      6299 I
e Ellobius_lutescens.LOEQ01008920.1                          17650  7 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089466 1162 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            62283 174 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    835315  0 +   1526836 C
e Cricetulus_griseus.LT883664.1                           11665468  2 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 48141  0 +     63868 C
e Condylura_cristata.JH655891.1                           17547413  8 -  53390261 I
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    136243  0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18499334  0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17957822  0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9033557  0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    184171  0 -    185531 C
e CanFam4.chr16                                           17798114  0 -  60362399 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Arctocebus_calabarensis.k141_2318572                        9644  0 +     14667 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      10117 439 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     72139 576 -     89534 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     68454  0 +     87051 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       4539 1 +     62944 A
s Allenopithecus_nigroviridis.k141_3361533                   12454 1 -     52922 a
i Allenopithecus_nigroviridis.k141_3361533               I 1 C 0
s Allochrocebus_lhoesti.k141_4309873                         12397 1 -     28001 a
i Allochrocebus_lhoesti.k141_4309873                     I 1 C 0
s Allochrocebus_preussi.k141_1442296                          2843 1 -     18505 a
i Allochrocebus_preussi.k141_1442296                     I 1 C 0
s Allochrocebus_solatus.k141_166128                           3692 1 -     12518 a
i Allochrocebus_solatus.k141_166128                      I 1 C 0
s Cercocebus_atys.KQ010504.1                               4473409 1 +   4669795 a
i Cercocebus_atys.KQ010504.1                             I 1 C 0
s Cercocebus_chrysogaster.k141_393940                        11958 1 -     19203 a
i Cercocebus_chrysogaster.k141_393940                    I 1 C 0
s Cercocebus_lunulatus.k141_3846941                           6380 1 +      8260 a
i Cercocebus_lunulatus.k141_3846941                      I 1 C 0
s Cercocebus_torquatus.k141_3057011                           6606 1 +     27781 a
i Cercocebus_torquatus.k141_3057011                      I 1 C 0
s Cercopithecus_ascanius.k141_1024104                         6764 1 -     20310 a
i Cercopithecus_ascanius.k141_1024104                    I 1 C 0
s Cercopithecus_cephus.k141_1078548                           9743 1 +     29689 a
i Cercopithecus_cephus.k141_1078548                      I 1 C 0
s Cercopithecus_diana.k141_2427854                            4174 1 +      9989 a
i Cercopithecus_diana.k141_2427854                       I 1 C 0
s Cercopithecus_hamlyni.k141_187466                          12422 1 -     27936 a
i Cercopithecus_hamlyni.k141_187466                      I 1 C 0
s Cercopithecus_lowei.k141_1854285                            1299 1 -     17152 a
i Cercopithecus_lowei.k141_1854285                       I 1 C 0
s Cercopithecus_albogularis.ctg5                                38814826 1 +  39242232 a
i Cercopithecus_albogularis.ctg5                               I 1 C 0
s Cercopithecus_mona.ctg39                                21220528 1 -  21565898 a
i Cercopithecus_mona.ctg39                               I 1 C 0
s Cercopithecus_neglectus.k141_2526306                       37646 1 -     53127 a
i Cercopithecus_neglectus.k141_2526306                   I 1 C 0
s Cercopithecus_nictitans.k141_3278028                        4906 1 +      7159 a
i Cercopithecus_nictitans.k141_3278028                   I 1 C 0
s Cercopithecus_petaurista.k141_807961                       12449 1 -     27947 a
i Cercopithecus_petaurista.k141_807961                   I 1 C 0
s Cercopithecus_pogonias.k141_822820                         12422 1 +     17596 a
i Cercopithecus_pogonias.k141_822820                     I 1 C 0
s Cercopithecus_roloway.k141_2567858                          1645 1 +     26000 a
i Cercopithecus_roloway.k141_2567858                     I 1 C 0
s Chlorocebus_aethiops.ctg25                              18426395 1 -  18827391 a
i Chlorocebus_aethiops.ctg25                             I 1 C 0
s Chlorocebus_pygerythrus.k141_1025673                       12832 1 -     50209 a
i Chlorocebus_pygerythrus.k141_1025673                   I 1 C 0
s Chlorocebus_sabaeus.CM001947.1                         135419832 1 + 135778131 a
i Chlorocebus_sabaeus.CM001947.1                         I 1 C 0
s Colobus_angolensis.KN981557.1                            1908347 1 +   2368649 a
i Colobus_angolensis.KN981557.1                          I 1 C 0
s Colobus_guereza.LG01                                   199948023 1 + 200372422 a
i Colobus_guereza.LG01                                   I 1 C 0
s Colobus_polykomos.k141_906115                              34885 1 +     84244 a
i Colobus_polykomos.k141_906115                          I 1 C 0
s Erythrocebus_patas.Contig38                             21203021 1 -  21539334 a
i Erythrocebus_patas.Contig38                            I 3 C 0
s Gorilla_beringei.k141_3596273                              13791 1 -     32273 a
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186335939 1 + 186649187 a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hoolock_leuconedys.ctg274                                    432603 1 +    630532 a
i Hoolock_leuconedys.ctg274                                 I 1 C 0
s Hylobates_agilis.k141_232023                                 369 1 -     12752 a
i Hylobates_agilis.k141_232023                           I 1 C 0
s Hylobates_klossii.k141_240831                                413 1 +     14092 a
i Hylobates_klossii.k141_240831                          I 1 C 0
s Hylobates_pileatus_b.LG02                                     189541196 1 - 191637585 a
i Hylobates_pileatus_b.LG02                                     I 1 C 0
s Hylobates_pileatus_a.tarseq_633                            3334090 1 -  11177569 a
i Hylobates_pileatus_a.tarseq_633                          I 1 C 0
s Lophocebus_aterrimus.ctg367                              1434956 1 +   1826925 a
i Lophocebus_aterrimus.ctg367                            I 1 C 0
s Macaca_arctoides.k141_2326796                               4771 1 +     40492 a
i Macaca_arctoides.k141_2326796                          I 1 C 0
s Macaca_assamensis.Contig5                               59674033 1 +  60120075 a
i Macaca_assamensis.Contig5                              I 1 C 0
s Macaca_cyclopis.k119_18836                                 10527 1 -     26193 a
i Macaca_cyclopis.k119_18836                             I 1 C 0
s Macaca_fascicularis.k141_814140                            78331 1 -    114318 a
i Macaca_fascicularis.k141_814140                        I 1 C 0
s Macaca_fuscata.k119_255327                                  4030 1 -     23192 a
i Macaca_fuscata.k119_255327                             I 1 C 0
s Macaca_leonina.k141_3550399                                13491 1 -     29190 a
i Macaca_leonina.k141_3550399                            I 1 C 0
s Macaca_maura.k141_2733130                                  22058 1 +     37952 a
i Macaca_maura.k141_2733130                              I 1 C 0
s Macaca_mulatta.NC_041758.1                             186837146 1 + 187317192 a
i Macaca_mulatta.NC_041758.1                             I 1 C 0
s Macaca_nemestrina.KQ007038.1                            25455708 1 -  25927173 a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  77907 1 +     89720 a
i Macaca_nigra.k141_1655396                              I 1 C 0
s Macaca_radiata.k141_3680011                                 4904 1 +     20474 a
i Macaca_radiata.k141_3680011                            I 1 C 0
s Macaca_siberu.k141_635500                                   4705 1 -     14993 a
i Macaca_siberu.k141_635500                              I 1 C 0
s Macaca_silenus.Contig273                                  327576 1 -    668171 a
i Macaca_silenus.Contig273                               I 1 C 0
s Macaca_thibetana.k99_256239                                 3016 1 -     24072 a
i Macaca_thibetana.k99_256239                            I 1 C 0
s Macaca_tonkeana.k141_1498238                               23645 1 -     45290 a
i Macaca_tonkeana.k141_1498238                           I 1 C 0
s Mandrillus_leucophaeus.scaffold280                      23935229 1 -  24302211 a
i Mandrillus_leucophaeus.scaffold280                     I 1 C 0
s Mandrillus_sphinx.Contig270                               349361 1 +    752769 a
i Mandrillus_sphinx.Contig270                            I 1 C 0
s Miopithecus_ogouensis.k141_534055                           6952 1 -     28506 a
i Miopithecus_ogouensis.k141_534055                      I 1 C 0
s Nasalis_larvatus.k141_413338                               12948 1 +     21681 a
i Nasalis_larvatus.k141_413338                           I 1 C 0
s Pan_troglodytes.CM009242.2                             189140800 1 + 189151597 a
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                183440983 1 + 183742232 a
i Papio_anubis.CM001495.2                                I 1 C 0
s Papio_cynocephalus.k141_4307930                             4677 1 +     20448 a
i Papio_cynocephalus.k141_4307930                        I 1 C 0
s Papio_hamadryas.Contig39                                20561485 1 +  20919399 a
i Papio_hamadryas.Contig39                               I 1 C 0
s Papio_kindae.k141_1936966                                   3421 1 +     41871 a
i Papio_kindae.k141_1936966                              I 1 C 0
s Papio_papio.k141_802527                                     6706 1 +     27711 a
i Papio_papio.k141_802527                                I 1 C 0
s Papio_ursinus.k141_3428135                                  6786 1 +      9205 a
i Papio_ursinus.k141_3428135                             I 1 C 0
s Piliocolobus_badius.k141_1234363                           41454 1 +     62158 a
i Piliocolobus_badius.k141_1234363                       I 1 C 0
s Piliocolobus_gordonorum.k141_381342                        36185 1 +     89929 a
i Piliocolobus_gordonorum.k141_381342                    I 1 C 0
s Piliocolobus_kirkii.k141_448987                            37601 1 +     51399 a
i Piliocolobus_kirkii.k141_448987                        I 1 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14293839 1 -  14605196 a
i Piliocolobus_tephrosceles.PDMG02000141.1               I 1 C 0
s Pongo_abelii.CM009266.2                                189128919 1 + 189387572 a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9568527 1 +   9816681 a
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               71116 1 -     81375 a
i Presbytis_comata.k141_677006                           I 1 C 0
s Presbytis_mitrata.k141_1087752                              2936 1 +     19060 a
i Presbytis_mitrata.k141_1087752                         I 1 C 0
s Pygathrix_cinerea.k141_1153803                             12947 1 -     91421 a
i Pygathrix_cinerea.k141_1153803                         I 1 C 0
s Pygathrix_nigripes_b.ctg100                                 7607073 1 +   7812017 a
i Pygathrix_nigripes_b.ctg100                               I 1 C 0
s Pygathrix_nigripes_a.k141_215492                             12921 1 -     72585 a
i Pygathrix_nigripes_a.k141_215492                         I 1 C 0
s Rhinopithecus_bieti.k119_217274                             4628 1 -     11128 a
i Rhinopithecus_bieti.k119_217274                        I 1 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91233984 1 - 195417433 a
i Rhinopithecus_roxellana.NC_044550.1                    I 1 C 0
s Rhinopithecus_strykeri.ctg102                            7669633 1 +   7961872 a
i Rhinopithecus_strykeri.ctg102                          I 1 C 0
s Semnopithecus_entellus.k141_11662                          17453 1 -     19888 a
i Semnopithecus_entellus.k141_11662                      I 1 C 0
s Semnopithecus_hypoleucos.k141_1615806                      24656 1 +     39453 a
i Semnopithecus_hypoleucos.k141_1615806                  I 1 C 0
s Semnopithecus_johnii.k141_670120                            5182 1 +     27826 a
i Semnopithecus_johnii.k141_670120                       I 1 C 0
s Semnopithecus_priam.k141_638794                             4702 1 -     19483 a
i Semnopithecus_priam.k141_638794                        I 1 C 0
s Semnopithecus_schistaceus.k141_1584426                      4764 1 +      7198 a
i Semnopithecus_schistaceus.k141_1584426                 I 1 C 0
s Semnopithecus_vetulus.k141_1200928                         13024 1 +     15514 a
i Semnopithecus_vetulus.k141_1200928                     I 1 C 0
s Symphalangus_syndactylus.tarseq_199                      1091238 1 -   1523678 a
i Symphalangus_syndactylus.tarseq_199                    I 1 C 0
s Theropithecus_gelada.CM009954.1                        186426349 1 + 186847797 a
i Theropithecus_gelada.CM009954.1                        I 1 C 0
s Trachypithecus_auratus.k141_722599                          8755 1 -     20410 a
i Trachypithecus_auratus.k141_722599                     I 1 C 0
s Trachypithecus_crepusculus.k141_1194022                    12949 1 +     15221 a
i Trachypithecus_crepusculus.k141_1194022                I 1 C 0
s Trachypithecus_cristatus.k141_580354                        8856 1 +     19930 a
i Trachypithecus_cristatus.k141_580354                   I 1 C 0
s Trachypithecus_francoisi.k141_1412647                       5285 1 -     19997 a
i Trachypithecus_francoisi.k141_1412647                  I 1 C 0
s Trachypithecus_geei.k141_277701                            45406 1 -     60166 a
i Trachypithecus_geei.k141_277701                        I 1 C 0
s Trachypithecus_germaini.k141_912491                        12878 1 -     27529 a
i Trachypithecus_germaini.k141_912491                    I 1 C 0
s Trachypithecus_hatinhensis.k141_143409                     12819 1 -     18194 a
i Trachypithecus_hatinhensis.k141_143409                 I 1 C 0
s Trachypithecus_laotum.k141_907409                           6552 1 -     21137 a
i Trachypithecus_laotum.k141_907409                      I 1 C 0
s Trachypithecus_leucocephalus.k141_587342                    5255 1 -     10723 a
i Trachypithecus_leucocephalus.k141_587342               I 1 C 0
s Trachypithecus_melamera.k141_434728                         4407 1 +      9834 a
i Trachypithecus_melamera.k141_434728                    I 1 C 0
s Trachypithecus_obscurus.k141_190785                        22723 1 +     32220 a
i Trachypithecus_obscurus.k141_190785                    I 1 C 0
s Trachypithecus_phayrei.ctg124                            5936822 1 +   6242583 a
i Trachypithecus_phayrei.ctg124                          I 1 C 0
s Trachypithecus_pileatus.k141_2007326                        6071 1 +     20839 a
i Trachypithecus_pileatus.k141_2007326                   I 1 C 0
e Echinops_telfairi.JH980293.1                            48778276 0 + 111700974 C
e Otolemur_garnettii.GL873799.1                             694317 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         2153 0 +      8798 C
e Galago_senegalensis.k141_631886                             2318 0 +     11339 C
e Galago_moholi.ctg2040                                     424611 0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          54316 0 -     80660 C
e Sapajus_apella.ctg103                                    5419275 0 -   5703754 C
e Saimiri_ustus.k141_1484609                                 21600 1 -     61129 I
e Saimiri_sciureus.k141_2278166                               1341 1 -     23631 I
e Saimiri_oerstedii.k141_1487881                             38335 1 -     64574 I
e Saimiri_macrodon.k141_716185                               21707 1 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       21612 1 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119949158 1 - 121099817 I
e Saguinus_oedipus.k141_63850                                 2939 1 +      3421 I
e Saguinus_mystax.k141_374627                                 5812 1 -      9399 I
e Saguinus_midas.LG03                                    209466606 1 + 209938924 I
e Saguinus_labiatus.k141_285685                               6324 1 +      8564 I
e Saguinus_inustus.k141_699149                               11462 1 +     13640 I
e Saguinus_imperator.k141_717981                              5735 1 -      6207 I
e Saguinus_geoffroyi.k141_1413670                            12074 1 -     13588 I
e Saguinus_bicolor.k141_2619299                               5792 1 -      8359 I
e Mico_schneideri.k141_1950671                                      3686 1 -      7356 I
e Mico_humeralifer.k141_1976199                               2747 1 +     18990 I
e Mico_argentatus.k141_1239457                                3681 1 -      7380 I
e Leontopithecus_rosalia.k141_464620                         23592 1 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    26895 1 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        5407 1 +     35603 I
e Leontocebus_illigeri.k141_3350179                           2539 1 +      4941 I
e Leontocebus_fuscicollis.k141_1820339                        5478 1 +     64341 I
e Chiropotes_albinasus.k141_2813271                           8451 841 +     11226 I
e Cebus_unicolor.k141_219506                                 14903 0 -     16904 I
e Cebus_olivaceus.k141_1000828                                1795 1 -      2944 I
e Cebus_albifrons.Contig27                                25650611 0 +  26074798 C
e Cebuella_pygmaea.k141_1309012                               3857 1 -      7577 I
e Cebuella_niveiventris.k141_1251222                          7759 1 -     11392 I
e Callithrix_kuhlii.k119_1164682                              9849 1 -     12001 I
e Callithrix_jacchus.pat_scaffold_3                       23588319 1 - 189096842 I
e Callithrix_geoffroyi.k119_512088                            3105 1 +      5267 I
e Callimico_goeldii.k141_1091182                             22635 2 +     31915 I
e Callibella_humilis.k141_1278103                             3135 1 -     10423 I
e Aotus_vociferans.k141_344750                               26517 1 -     47192 I
e Aotus_trivirgatus.k141_2152450                             13396 1 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4295791 1 -   5030052 I
e Aotus_griseimembra.k141_2240599                            13394 1 -     34016 I
e Aotus_azarae.k141_3104676                                  13374 1 -     33861 I
e Alouatta_seniculus.k141_117119                             12753 1 +     50774 I
e Alouatta_puruensis.k141_1253230                             1533 1 -      3544 I
e Alouatta_palliata.k141_2135620                              1403 1 +     47717 I
e Alouatta_nigerrima.k141_3472759                            16016 1 -     18578 I
e Alouatta_macconnelli.k141_1406484                           1903 1 +      2906 I
e Alouatta_juara.k141_1509701                                22719 1 +     25266 I
e Alouatta_discolor.k141_743489                               1513 1 -     45847 I
e Alouatta_caraya.k141_1743867                                1378 1 +      3134 I
e Alouatta_belzebul.k141_3238538                              1253 1 -     27731 I
e Mus_pahari.LT608297.1                                   31352818 0 -  89631738 C
e Mus_spretus.CM004101.1                                  90750234 0 - 130317789 C
e Mus_musculus.chr8                                       87648156 0 - 129401213 C
e Mus_caroli.LT608237.1                                   84359172 0 - 120012414 C
e Chrysochloris_asiatica.ChrAsi_scaffold_2561901               336 0 -       464 C
e Loris_tardigradus.ctg83                                  1002909 0 +   6120653 C
e Loris_lydekkerianus.k141_2539221                            4070 0 +     11245 C
e Perodicticus_potto.k141_1092580                             6662 0 +     25941 C
e Perodicticus_ibeanus.k141_855320                            8284 0 +     13100 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_17732          4010 1 +     86975 I
e Xerus_inauris.XerIna_scaffold_48378                        22715 0 -     24430 C
e Vulpes_lagopus.VulLag_flattened_line_30954                  9730 0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5370748 1 -   5488506 I
e Varecia_variegata.k141_1128296                              9900 1 +     24756 I
e Varecia_rubra.k141_590885                                   9845 1 +     50397 I
e Ursus_maritimus.KK499267.1                               4849284 1 -   5085361 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52652 8 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     7744 1 -     10553 I
e Tupaia_chinensis.KB320699.1                              2154087 1 +   4065304 I
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     79791 2 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   3554 1 +      8208 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937 0 +    114563 C
e Tarsius_wallacei.k141_2029956                               3879 1 +      4644 I
e Tarsius_lariang.k141_2201908                               24539 1 +     70052 I
e Tapirus_terrestris.TapTer_scaffold_755                    386062 3 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      117609 3 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 70989 1 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                 9486 3 +     41958 I
e Sus_scrofa.JH118708.1                                      34373 1 -     47482 I
e Suricata_suricatta.SurSur_flattened_line_6629              17176 1 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             29595 1 +     97271 I
e Spermophilus_dauricus.KZ294078.1                         1951468 299 -   3870691 I
e Sorex_araneus.JH798187.1                                13649669 1 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               2624 1 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11304 0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152480 8 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                86644 1 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rattus_norvegicus.chr16                                 53568239 0 +  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20273157 1 -  38429054 I
e Pteropus_vampyrus.KN525825.1                             1358722 1 +   4952924 I
e Pteropus_alecto.KB030862.1                              22975633 1 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         39087 1 +     42204 I
e Pteronotus_parnellii.KE909381.1                            13542 2 -     21811 I
e Psammomys_obesus.NESX01036370.1                             8401 0 -     21651 C
e Propithecus_verreauxi.k141_956661                           3237 1 -      6182 I
e Propithecus_tattersalli.k141_790011                        27001 1 -     67325 I
e Propithecus_perrieri.k141_1200571                           3180 1 -     24134 I
e Propithecus_edwardsi.k141_1176054                          24997 1 +     35766 I
e Propithecus_diadema.k141_357118                             3644 1 +      4256 I
e Propithecus_coronatus.k141_347390                          27484 1 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     989174 1 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2595180 1 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 11479 1 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823 1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813 0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18191985 0 -  18517816 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11496 1 -     78924 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4719881 1 -   8748460 I
e Panthera_pardus.KV860321.1                                263243 1 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  150038 1 +    230217 I
e Pan_paniscus.KQ411613.1                                    41837 195 +     80009 I
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       461284 0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                        67145235 1 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387               7577 1418 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    77382 0 +    102263 C
e Ondatra_zibethicus.OndZib_scaffold_46174                   22267 24 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              505516 1 -   2017862 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1361443 1 +   3988456 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105748257 0 + 199412804 C
e Nycticebus_coucang.k141_5327727                             5516 0 +      8486 C
e Nycticebus_bengalensis.LG01                            102577830 0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9148320 0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805 0 +       996 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187637 1 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016 1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456 1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390 1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692 1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               300068 1 -  14710649 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           5520 1 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   34287 1 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 140162 2 -    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Mirza_zaza.k141_952172                                      7493 1 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         4577 1 -      8324 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686 0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11258701 7 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                14250 2 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    18126 0 -    145209 C
e Microcebus_murinus.CM007674.1                           18289921 1 -  93316391 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12180532 2 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 30759 0 +    140813 C
e Mellivora_capensis.MelCap_flattened_line_69365              8888 1 +     13704 I
e Megaderma_lyra.MegLyr_scaffold_4542                        13460 4270 -    207569 T
e Marmota_marmota.CZRN01000018.1                          33100580 298 -  40650429 I
e Manis_pentadactyla.KN006162.1                              49698 606 -    317179 I
e Manis_javanica.JSZB01003497.1                              18314 1 +    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_8222                 89463 1 +     94391 I
e Lycaon_pictus.CM007581.1                                17954062 0 -  59628241 C
e Loxodonta_africana.GL010049.1                            4215831 1 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     4390 1 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3041709 1 +   3914936 I
e Lepilemur_septentrionalis.k141_185316                      25421 1 +     54090 I
e Lepilemur_ruficaudatus.k141_667017                          2021 1 -      2151 I
e Lepilemur_dorsalis.k141_577674                             27485 1 +     45836 I
e Lepilemur_ankaranensis.k141_596936                          9419 1 -     23766 I
e Lemur_catta.scaffold_24                                 15522512 1 -  30322482 I
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Indri_indri.k141_3655594                                   20972 1 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7518272 302 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      81626 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547 0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  43312 1 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42068 1 +     43066 I
e Hipposideros_armiger.JXIK01000431.1                       110642 1 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_403422                 486 1 -       893 I
e Heterocephalus_glaber.JH602082.1                        20660051 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               241175 1 +    327341 I
e Hapalemur_occidentalis.k141_907772                         12007 1 -     16460 I
e Hapalemur_meridionalis.k141_248335                         12169 1 -     41752 I
e Hapalemur_griseus.k141_1511508                             12068 1 +     18253 I
e Hapalemur_gilberti.k141_488810                             10429 1 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           5280 1 -     19426 I
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Galeopterus_variegatus.GalVar_scaffold_197845               2479 1 -      3123 I
e Galagoides_demidoff.k141_1959596                            6126 0 +      6795 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  8385 1 -     36744 I
e Felis_catus_fca126.CM031415.1                           20194871 1 + 205367284 I
e Eulemur_sanfordi.k141_1122526                              12200 1 +    111500 I
e Eulemur_rufus.k141_1476633                                  2624 1 -     17153 I
e Eulemur_rubriventer.k141_571033                            12027 1 +     26496 I
e Eulemur_mongoz.k141_232305                                  9091 1 +     97555 I
e Eulemur_macaco.k141_1562045                                11149 1 +     75513 I
e Eulemur_fulvus.k141_544389                                 12388 1 +     23973 I
e Eulemur_flavifrons.k141_1184614                            11149 1 +     26330 I
e Eulemur_coronatus.k141_885031                              13959 1 -     25546 I
e Eulemur_collaris.k141_377015                                4922 1 -     16928 I
e Eulemur_albifrons.k141_342033                              12224 1 -     14127 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Equus_przewalskii.KK951119.1                               32034 3 +    498745 I
e Equus_caballus.CM000403.2                               18530019 3 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1282198 3 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2144447 1 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16328171 1 -  41312741 I
e Ellobius_talpinus.LOJH01109367.1                            3704 7 -      6299 I
e Ellobius_lutescens.LOEQ01008920.1                          17650 7 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089466 1162 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Eidolon_helvum.KE759718.1                                   9370 1 +     11740 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084 0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    4889 3 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  672136 3 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8628736 2 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Daubentonia_madagascariensis.ctg71                      12535743 1 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            62283 174 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    835315 0 +   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129             27335 1 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_37019               1635 1 -     19598 I
e Cricetulus_griseus.LT883664.1                           11665468 2 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 48141 0 +     63868 C
e Craseonycteris_thonglongyai.CraTho_scaffold_49039            361 88 +     23735 I
e Condylura_cristata.JH655891.1                           17547413 8 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            171810 1 +    839153 I
e Choloepus_didactylus.ChoDid_scaffold_45914                 16711 1 +     19366 I
e Chinchilla_lanigera.JH722012.1                           1251498 0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           14880 1 +     57038 I
e Cheirogaleus_major.k141_333249                             19529 1 -     52598 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1313 3 -     25243 I
e Cephalopachus_bancanus.k141_1423433                         3928 1 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99291 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157 0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     91858 1 +    217609 I
e Castor_canadensis.CasCan_scaffold_2074                    136243 0 +    179628 C
e Carollia_perspicillata.CarPer_scaffold_92756                3704 2 -     11696 I
e Carlito_syrichta.NW_007259797.1                           154417 1 -    496798 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18499334 0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17957822 0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9033557 0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    184171 0 -    185531 C
e CanFam4.chr16                                           17798114 0 -  60362399 C
e Camelus_ferus.KB017975.1                                  402001 1 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2333719 1 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10001261 1 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              52749 1 +     85213 I
e Avahi_laniger.k141_765380                                  52120 1 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3342 2 +     43469 I
e Arctocebus_calabarensis.k141_2318572                        9644 0 +     14667 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      10117 439 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      183930 2 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     72139 576 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             78203 1 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9509418 1 -  29979442 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     68454 0 +     87051 C
e Acinonyx_jubatus.LLWD01001279.1                           826159 1 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       4540 17 +     62944 TC----AAAAT-TT-----CCATC----------AAC
s Acinonyx_jubatus.LLWD01001279.1                           826160 16 -   1699592 gc----caaa--tt-ctatcaac--------------
i Acinonyx_jubatus.LLWD01001279.1                        I 1 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9509419 15 -  29979442 gc----aaaa--ac--cttcaac--------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 1 C 0
s Ailurus_fulgens.LNAC01001112.1                             78204 15 -    347723 tc----aaaa--tc--cttcaac--------------
i Ailurus_fulgens.LNAC01001112.1                         I 1 C 0
s Allenopithecus_nigroviridis.k141_3361533                   12455 17 -     52922 tc----aaaat-tt-----ccatc----------aac
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         12398 17 -     28001 tc----aaaat-tt-----ccatc----------aac
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          2844 17 -     18505 tc----aaaat-tt-----ccatc----------aac
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           3693 17 -     12518 tc----aaaat-tt-----ccatc----------aac
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                              1254 17 -     27731 tg----aaaat-tt-----ccatc----------agc
i Alouatta_belzebul.k141_3238538                         I 1 C 0
s Alouatta_caraya.k141_1743867                                1379 17 +      3134 tg----aaaat-tt-----ccatc----------agc
i Alouatta_caraya.k141_1743867                           I 1 C 0
s Alouatta_discolor.k141_743489                               1514 17 -     45847 tg----aaaat-tt-----ccatc----------agc
i Alouatta_discolor.k141_743489                          I 1 C 0
s Alouatta_juara.k141_1509701                                22720 17 +     25266 tg----aaaat-tt-----ccatc----------agc
i Alouatta_juara.k141_1509701                            I 1 C 0
s Alouatta_macconnelli.k141_1406484                           1904 17 +      2906 tg----aaaat-tt-----ccatc----------agc
i Alouatta_macconnelli.k141_1406484                      I 1 C 0
s Alouatta_nigerrima.k141_3472759                            16017 17 -     18578 tg----aaaat-tt-----ccatc----------agc
i Alouatta_nigerrima.k141_3472759                        I 1 C 0
s Alouatta_palliata.k141_2135620                              1404 17 +     47717 tg----aaaat-tt-----ccatc----------agc
i Alouatta_palliata.k141_2135620                         I 1 C 0
s Alouatta_puruensis.k141_1253230                             1534 17 -      3544 tg----aaaat-tt-----ccatc----------agc
i Alouatta_puruensis.k141_1253230                        I 1 C 0
s Alouatta_seniculus.k141_117119                             12754 17 +     50774 tg----aaaat-tt-----ccatc----------agc
i Alouatta_seniculus.k141_117119                         I 1 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183932 17 +    412891 ta----aaaat-tt-ccatcaac--------------
i Anoura_caudifer.AnoCau_scaffold_1412                   I 2 I 8
s Aotus_azarae.k141_3104676                                  13375 17 -     33861 tc----acaat-tt-----cattc----------agc
i Aotus_azarae.k141_3104676                              I 1 C 0
s Aotus_griseimembra.k141_2240599                            13395 17 -     34016 tc----acaat-tt-----cattc----------agc
i Aotus_griseimembra.k141_2240599                        I 1 C 0
s Aotus_nancymaae.KZ198451.1                               4295792 17 -   5030052 tc----acaat-tt-----catTC----------AGC
i Aotus_nancymaae.KZ198451.1                             I 1 C 0
s Aotus_trivirgatus.k141_2152450                             13397 17 -     34685 tc----acaat-tt-----cattc----------agc
i Aotus_trivirgatus.k141_2152450                         I 1 C 0
s Aotus_vociferans.k141_344750                               26518 17 -     47192 tc----acaat-tt-----cattc----------agc
i Aotus_vociferans.k141_344750                           I 1 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3344 17 +     43469 ta----aaaat-tt-ccatcaac--------------
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 2 I 8
s Avahi_laniger.k141_765380                                  52121 14 -     92717 tc----taaat-tt--------cc----------aac
i Avahi_laniger.k141_765380                              I 1 C 0
s Avahi_peyrierasi.k141_1424874                              52750 14 +     85213 tc----taaat-tt--------cc----------aac
i Avahi_peyrierasi.k141_1424874                          I 1 C 0
s Callibella_humilis.k141_1278103                             3136 17 -     10423 tc----aaaat-tt-----ccatc----------agt
i Callibella_humilis.k141_1278103                        I 1 C 0
s Callimico_goeldii.k141_1091182                             22637 17 +     31915 tc----aaaat-tt-----ccatc----------agc
i Callimico_goeldii.k141_1091182                         I 2 C 0
s Callithrix_geoffroyi.k119_512088                            3106 17 +      5267 tc----aaaat-tt-----ccgtc----------agt
i Callithrix_geoffroyi.k119_512088                       I 1 C 0
s Callithrix_jacchus.pat_scaffold_3                       23588320 17 - 189096842 TC----AAAAT-TT-----CCATC----------AGT
i Callithrix_jacchus.pat_scaffold_3                      I 1 C 0
s Callithrix_kuhlii.k119_1164682                              9850 17 -     12001 tc----aaaat-tt-----ccatc----------agt
i Callithrix_kuhlii.k119_1164682                         I 1 C 0
s Camelus_bactrianus.KN276810.1                           10001262 17 -  17673402 tt----aaaat-tt-ccataaac--------------
i Camelus_bactrianus.KN276810.1                          I 1 C 0
s Camelus_dromedarius.KN272107.1                           2333720 17 -   7040546 tt----aaaat-tt-ccataaac--------------
i Camelus_dromedarius.KN272107.1                         I 1 C 0
s Camelus_ferus.KB017975.1                                  402002 17 -   1652518 tt----aaaat-tt-ccataaac--------------
i Camelus_ferus.KB017975.1                               I 1 C 0
s Carlito_syrichta.NW_007259797.1                           154418 17 -    496798 tt----aaaat-tg-----cCATC----------AGC
i Carlito_syrichta.NW_007259797.1                        I 1 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                3706 17 -     11696 ta----aaaac-tt-ccatcaac--------------
i Carollia_perspicillata.CarPer_scaffold_92756           I 2 I 8
s Catagonus_wagneri.CatWag_scaffold_2839                     91859 17 +    217609 tg----aaaat-tt-ccacaaac--------------
i Catagonus_wagneri.CatWag_scaffold_2839                 I 1 C 0
s Cebuella_niveiventris.k141_1251222                          7760 17 -     11392 tc----aaaat-tt-----ccatc----------agc
i Cebuella_niveiventris.k141_1251222                     I 1 C 0
s Cebuella_pygmaea.k141_1309012                               3858 17 -      7577 tc----aaaat-tt-----ccatc----------agc
i Cebuella_pygmaea.k141_1309012                          I 1 C 0
s Cebus_olivaceus.k141_1000828                                1796 17 -      2944 tc----aaaat-tt-----ccatc----------agc
i Cebus_olivaceus.k141_1000828                           I 1 C 0
s Cephalopachus_bancanus.k141_1423433                         3929 17 +     31688 tt----aaaat-tt-----ccatc----------agc
i Cephalopachus_bancanus.k141_1423433                    I 1 C 0
s Ceratotherium_simum.JH767749.1                          12230289 17 +  27778364 at----gaaat-ct-ccatcaat--------------
i Ceratotherium_simum.JH767749.1                         I 3 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1316 17 -     25243 at----gaaat-ct-ccatcaat--------------
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 3 C 0
s Cercocebus_atys.KQ010504.1                               4473410 17 +   4669795 tc----aaaat-tt-----ccatc----------aac
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        11959 17 -     19203 tc----aaaat-tt-----ccatc----------aac
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           6381 17 +      8260 tc----aaaat-tt-----ccatc----------aac
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           6607 17 +     27781 tc----aaaat-tt-----ccatc----------aac
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         6765 17 -     20310 tc----aaaat-tt-----ccatc----------aac
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           9744 17 +     29689 tc----aaaat-tt-----ccatc----------aac
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            4175 17 +      9989 tc----aaaat-tt-----ccatc----------aac
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          12423 17 -     27936 tc----aaaat-tt-----ccatc----------aac
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            1300 17 -     17152 tc----aaaat-tt-----ccatc----------aac
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38814827 17 +  39242232 tc----aaaat-tt-----ccatc----------aac
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21220529 17 -  21565898 tc----aaaat-tt-----ccatc----------aac
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       37647 17 -     53127 tc----aaaat-tt-----ccatc----------aac
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        4907 17 +      7159 tc----aaaat-tt-----ccatc----------aac
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       12450 17 -     27947 tc----aaaat-tt-----ccatc----------aac
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         12423 17 +     17596 tc----aaaat-tt-----ccatc----------aac
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          1646 17 +     26000 tc----aaaat-tt-----ccatc----------aac
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_713168               0 14 -      2554 aa----atgaccgt-----caac--------------
i Chaetophractus_vellerosus.ChaVel_scaffold_713168       N 0 C 0
s Cheirogaleus_major.k141_333249                             19530 14 -     52598 tc----taaat-tt--------cc----------aac
i Cheirogaleus_major.k141_333249                         I 1 C 0
s Cheirogaleus_medius.k141_1055463                           14881 14 +     57038 tc----taaat-tt--------cc----------aac
i Cheirogaleus_medius.k141_1055463                       I 1 C 0
s Chlorocebus_aethiops.ctg25                              18426396 17 -  18827391 tc----aaaat-tt-----ccatc----------aac
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       12833 17 -     50209 tc----aaaat-tt-----ccatc----------aac
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135419833 17 + 135778131 tc----aaaat-tt-----ccaTC----------AAC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 16712 14 +     19366 aa----atgttcat-----caac--------------
i Choloepus_didactylus.ChoDid_scaffold_45914             I 1 C 0
s Choloepus_hoffmanni.KN194906.1                            171811 14 +    839153 aa----atgctcat-----caac--------------
i Choloepus_hoffmanni.KN194906.1                         I 1 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_2561901               336 11 -       464 ------a-gttcat-----caac--------------
i Chrysochloris_asiatica.ChrAsi_scaffold_2561901         C 0 C 0
s Colobus_angolensis.KN981557.1                            1908348 17 +   2368649 tc----caaat-tt-----ccatc----------aac
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199948024 17 + 200372422 tc----caaat-tt-----ccatc----------aac
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              34886 17 +     84244 tc----caaat-tt-----ccatc----------aac
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          12848 17 -     20389 at----aaaat-tt-ccatcaat--------------
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 7 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               1636 18 -     19598 GA----AAAAA-TTACCACTAAC--------------
i Crocidura_indochinensis.CroInd_scaffold_37019          I 1 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27336 16 -     87169 gc----aaaa--tt-ctttcaag--------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 1 C 0
s Daubentonia_madagascariensis.ctg71                      12535744 14 -  12879189 tc----taaat-tt--------cc----------aac
i Daubentonia_madagascariensis.ctg71                     I 1 C 0
s Desmodus_rotundus.KZ672289.1                             8628738 17 +  20541912 ta----aaaat-tt-ccatcaac--------------
i Desmodus_rotundus.KZ672289.1                           I 2 I 8
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672139 17 +   1390856 at----gaaat-ct-ccatcaat--------------
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 3 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    4892 17 +    198055 at----gaaat-ct-ccatcaat--------------
i Diceros_bicornis.DicBicMic_scaffold_5955               I 3 C 0
s Eidolon_helvum.KE759718.1                                   9371 17 +     11740 gt----aaaat-tt-ctgtcaat--------------
i Eidolon_helvum.KE759718.1                              I 1 C 0
s Enhydra_lutris.KZ291758.1                               16328172 15 -  41312741 gc----aaaa--tc--cttcaac--------------
i Enhydra_lutris.KZ291758.1                              I 1 C 0
s Equus_asinus.JREZ01000139.1                              1282201 17 +   4378816 gt----taaat-tt-ccatcagc--------------
i Equus_asinus.JREZ01000139.1                            I 3 C 0
s Equus_caballus.CM000403.2                               18530022 17 -  39960074 gt----taaat-tt-ccatcagc--------------
i Equus_caballus.CM000403.2                              I 3 C 0
s Equus_przewalskii.KK951119.1                               32037 17 +    498745 gt----taaat-tt-ccatcagc--------------
i Equus_przewalskii.KK951119.1                           I 3 C 0
s Erythrocebus_patas.Contig38                             21203022 17 -  21539334 tc----aaaat-tt-----ccatc----------aac
i Erythrocebus_patas.Contig38                            C 0 I 11
s Eulemur_albifrons.k141_342033                              12225 14 -     14127 tc----tcaat-tt--------ct----------aac
i Eulemur_albifrons.k141_342033                          I 1 C 0
s Eulemur_collaris.k141_377015                                4923 14 -     16928 tg----tcaat-tt--------ct----------aac
i Eulemur_collaris.k141_377015                           I 1 C 0
s Eulemur_coronatus.k141_885031                              13960 14 -     25546 tc----tcaat-tt--------ct----------aac
i Eulemur_coronatus.k141_885031                          I 1 C 0
s Eulemur_flavifrons.k141_1184614                            11150 14 +     26330 tc----tcaat-tt--------ct----------aac
i Eulemur_flavifrons.k141_1184614                        I 1 C 0
s Eulemur_fulvus.k141_544389                                 12389 14 +     23973 tc----tcaat-tt--------ct----------aac
i Eulemur_fulvus.k141_544389                             I 1 C 0
s Eulemur_macaco.k141_1562045                                11150 14 +     75513 tc----tcaat-tt--------ct----------aac
i Eulemur_macaco.k141_1562045                            I 1 C 0
s Eulemur_mongoz.k141_232305                                  9092 14 +     97555 tg----tcaat-tt--------ct----------aac
i Eulemur_mongoz.k141_232305                             I 1 C 0
s Eulemur_rubriventer.k141_571033                            12028 14 +     26496 tc----tcaat-tt--------ct----------aac
i Eulemur_rubriventer.k141_571033                        I 1 C 0
s Eulemur_rufus.k141_1476633                                  2625 14 -     17153 tg----tcaat-tt--------ct----------aac
i Eulemur_rufus.k141_1476633                             I 1 C 0
s Eulemur_sanfordi.k141_1122526                              12201 14 +    111500 tg----tcaat-tt--------ct----------aac
i Eulemur_sanfordi.k141_1122526                          I 1 C 0
s Felis_catus.CM001381.2                                  20236029 16 + 206538554 gc----caaa--tt-ctatcaac--------------
i Felis_catus.CM001381.2                                 I 1 C 0
s Felis_catus_fca126.CM031415.1                           20194872 16 + 205367284 gc----caaa--tt-ctatcaac--------------
i Felis_catus_fca126.CM031415.1                          I 1 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  8386 16 -     36744 gc----caaa--tt-ctatcaac--------------
i Felis_nigripes.FelNig_flattened_line_20823             I 1 C 0
s Galeopterus_variegatus.GalVar_scaffold_197845               2480 17 -      3123 tc----aaaat-tt-----tcatc----------aaa
i Galeopterus_variegatus.GalVar_scaffold_197845          I 1 C 0
s Gorilla_beringei.k141_3596273                              13792 17 -     32273 tc----aaaat-tt-----ccatc----------aac
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186335940 17 + 186649187 tc----aaaat-tt-----ccatc----------aac
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           5281 14 -     19426 tt----tcaat-tt--------ct----------aac
i Hapalemur_alaotrensis.k141_170648                      I 1 C 0
s Hapalemur_gilberti.k141_488810                             10430 14 -     15286 tt----tcaat-tt--------ct----------aac
i Hapalemur_gilberti.k141_488810                         I 1 C 0
s Hapalemur_griseus.k141_1511508                             12069 14 +     18253 tt----tcaat-tt--------ct----------aac
i Hapalemur_griseus.k141_1511508                         I 1 C 0
s Hapalemur_meridionalis.k141_248335                         12170 14 -     41752 tt----tcaat-tt--------ct----------aac
i Hapalemur_meridionalis.k141_248335                     I 1 C 0
s Hapalemur_occidentalis.k141_907772                         12008 14 -     16460 tt----tcaat-tt--------ct----------aac
i Hapalemur_occidentalis.k141_907772                     I 1 C 0
s Helogale_parvula.HelPar_flattened_line_2585               241176 16 +    327341 ac----aaaa--tt-ctagcaag--------------
i Helogale_parvula.HelPar_flattened_line_2585            I 1 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_403422                 487 13 -       893 ca----a-gtccat-----caac--------------
i Heterohyrax_brucei.HetBruBak_scaffold_403422           I 1 I 8
s Hipposideros_armiger.JXIK01000431.1                       110643 17 +   1711038 at----aaaat-tt-ctgtcaat--------------
i Hipposideros_armiger.JXIK01000431.1                    I 1 I 8
s Hipposideros_galeritus.HipGal_scaffold_29171               42069 17 +     43066 at----aaaat-tt-ccatcaac--------------
i Hipposideros_galeritus.HipGal_scaffold_29171           I 1 C 0
s Hoolock_leuconedys.ctg274                                    432604 17 +    630532 tc----aaaat-tt-----ccatc----------aac
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  43313 16 +     55795 gc----aaaa--tt-ctatcaac--------------
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 1 C 0
s Hylobates_agilis.k141_232023                                 370 17 -     12752 tc----aaaat-tt-----ccatc----------aac
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                                414 17 +     14092 tc----aaaat-tt-----ccatc----------aac
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189541197 17 - 191637585 tc----aaaat-tt-----ccatc----------aac
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3334091 17 -  11177569 tc----aaaat-tt-----ccatc----------aac
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_3655594                                   20973 14 +     31101 tc----taaat-tt--------cc----------agc
i Indri_indri.k141_3655594                               I 1 C 0
s Lemur_catta.scaffold_24                                 15522513 14 -  30322482 tc----tcaat-tt--------ct----------aac
i Lemur_catta.scaffold_24                                I 1 C 0
s Leontocebus_fuscicollis.k141_1820339                        5479 17 +     64341 tc----aaaat-tt-----ccatc----------agc
i Leontocebus_fuscicollis.k141_1820339                   I 1 C 0
s Leontocebus_illigeri.k141_3350179                           2540 17 +      4941 tc----aaaat-tt-----ccatc----------agc
i Leontocebus_illigeri.k141_3350179                      I 1 C 0
s Leontocebus_nigricollis.k141_4610752                        5408 17 +     35603 tc----aaaat-tt-----ccatc----------agc
i Leontocebus_nigricollis.k141_4610752                   I 1 C 0
s Leontopithecus_chrysomelas.k141_1519602                    26896 17 +     38576 tc----agaat-tt-----ccttc----------agc
i Leontopithecus_chrysomelas.k141_1519602                I 1 C 0
s Leontopithecus_rosalia.k141_464620                         23593 17 +     66356 tc----agaat-tt-----ccttc----------agc
i Leontopithecus_rosalia.k141_464620                     I 1 C 0
s Lepilemur_ankaranensis.k141_596936                          9420 14 -     23766 tc----taaat-tt--------cc----------aac
i Lepilemur_ankaranensis.k141_596936                     I 1 C 0
s Lepilemur_dorsalis.k141_577674                             27486 14 +     45836 tc----taaat-tt--------cc----------aac
i Lepilemur_dorsalis.k141_577674                         I 1 C 0
s Lepilemur_ruficaudatus.k141_667017                          2022 14 -      2151 tc----taaat-tt--------cc----------aac
i Lepilemur_ruficaudatus.k141_667017                     I 1 C 0
s Lepilemur_septentrionalis.k141_185316                      25422 14 +     54090 tc----taaat-tt--------cc----------aac
i Lepilemur_septentrionalis.k141_185316                  I 1 C 0
s Leptonychotes_weddellii.KB714746.1                       3041710 15 +   3914936 gc----aaaa--tc--catcaac--------------
i Leptonychotes_weddellii.KB714746.1                     I 1 C 0
s Lepus_americanus.LepAme_scaffold_107385                     4391 13 -     14121 tc----aaaat-tt-----ctgt--------------
i Lepus_americanus.LepAme_scaffold_107385                I 1 C 0
s Lophocebus_aterrimus.ctg367                              1434957 17 +   1826925 tc----aaaat-tt-----ccatc----------aac
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                            4215832 13 -  43346337 ga----a-gtccat-----caac--------------
i Loxodonta_africana.GL010049.1                          I 1 C 0
s Macaca_arctoides.k141_2326796                               4772 17 +     40492 tc----aaaat-tt-----ccatc----------aac
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59674034 17 +  60120075 tc----aaaat-tt-----ccatc----------aac
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 10528 17 -     26193 tc----aaaat-tt-----ccatc----------aac
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            78332 17 -    114318 tc----aaaat-tt-----ccatc----------aac
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  4031 17 -     23192 tc----aaaat-tt-----ccatc----------aac
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                13492 17 -     29190 tc----aaaat-tt-----ccatc----------aac
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  22059 17 +     37952 tc----aaaat-tt-----ccatc----------aac
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186837147 17 + 187317192 tc----aaaat-tt-----ccatc----------aac
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25455709 17 -  25927173 tc----aaaat-tt-----ccatc----------aac
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  77908 17 +     89720 tc----aaaat-tt-----ccatc----------aac
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 4905 17 +     20474 tc----aaaat-tt-----ccatc----------aac
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   4706 17 -     14993 tc----aaaat-tt-----ccatc----------aac
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  327577 17 -    668171 tc----aaaat-tt-----ccatc----------aac
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 3017 17 -     24072 tc----aaaat-tt-----ccatc----------aac
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               23646 17 -     45290 tc----aaaat-tt-----ccatc----------aac
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 89464 17 +     94391 at----aaaat-tt-ctgtcaat--------------
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 1 C 0
s Mandrillus_leucophaeus.scaffold280                      23935230 17 -  24302211 tc----aaaat-tt-----ccatc----------aac
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               349362 17 +    752769 tc----aaaat-tt-----ccatc----------aac
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              18315 17 +    737560 GC----GGAAT-TT-CCATCAAC--------------
i Manis_javanica.JSZB01003497.1                          I 1 C 0
s Manis_pentadactyla.KN006162.1                              50304 17 -    317179 GG----GGAAT-AT-CCATCAAC--------------
i Manis_pentadactyla.KN006162.1                          I 606 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         9190 17 -    207569 at----aaaat-tt-ccatcaat--------------
i Megaderma_lyra.MegLyr_scaffold_4542                    T 4270 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              8889 15 +     13704 gc----aaaa--tc--cttcaac--------------
i Mellivora_capensis.MelCap_flattened_line_69365         I 1 C 0
s Mico_argentatus.k141_1239457                                3682 17 -      7380 tc----aaaat-tt-----ccatc----------agc
i Mico_argentatus.k141_1239457                           I 1 C 0
s Mico_humeralifer.k141_1976199                               2748 17 +     18990 tc----aaaat-tt-----ccatc----------agc
i Mico_humeralifer.k141_1976199                          I 1 C 0
s Mico_schneideri.k141_1950671                                      3687 17 -      7356 tc----aaaat-tt-----ccgtc----------agc
i Mico_schneideri.k141_1950671                                 I 1 C 0
s Microcebus_murinus.CM007674.1                           18289922 14 -  93316391 tC----TAAAT-TT--------CC----------AAC
i Microcebus_murinus.CM007674.1                          I 1 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                14252 17 -     19307 ta----aaaat-tt-ccatcaac--------------
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 2 I 8
s Miopithecus_ogouensis.k141_534055                           6953 17 -     28506 tc----aaaat-tt-----ccatc----------aac
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         4578 15 -      8324 gc----aaaa--tc--catcaac--------------
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 1 C 0
s Mirza_zaza.k141_952172                                      7494 14 -     37649 tc----taaat-tt--------ct----------aac
i Mirza_zaza.k141_952172                                 I 1 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140164 17 -    366855 ta----aaaat-tt-ccatcaac--------------
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 2 I 8
s Mungos_mungo.MunMun_flattened_line_23663                   34288 16 +     37127 ac----aaaa--tt-ctagcaag--------------
i Mungos_mungo.MunMun_flattened_line_23663               I 1 C 0
s Mustela_putorius.JH418006.1                               300069 12 -  14710649 gc----aaaa--tc-----cagc--------------
i Mustela_putorius.JH418006.1                            I 1 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187638 14 +    196477 aa----atgctcat-----caac--------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 1 C 0
s Nasalis_larvatus.k141_413338                               12949 17 +     21681 tc----aaaat-tt-----ccatc----------aac
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Ochotona_princeps.JH802162.1                             1361444 13 +   3988456 cc----aaaat-tt-----ccaa--------------
i Ochotona_princeps.JH802162.1                           I 1 C 0
s Odobenus_rosmarus.KB229312.1                              505517 15 -   2017862 gc----aaaa--tc--catcaac--------------
i Odobenus_rosmarus.KB229312.1                           I 1 C 0
s Oryctolagus_cuniculus.CM000791.1                        67145236 13 + 174332312 tc----aaaat-tt-----ctgt--------------
i Oryctolagus_cuniculus.CM000791.1                       I 1 C 0
s Pan_troglodytes.CM009242.2                             189140801 17 + 189151597 tc----aaaat-tt-----ccatc----------aac
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  150039 16 +    230217 gc----caaa--tt-ctatcaac--------------
i Panthera_onca.PanOnc_flattened_line_3271               I 1 C 0
s Panthera_pardus.KV860321.1                                263244 16 +  18783137 gc----caaa--tt-ctatcaac--------------
i Panthera_pardus.KV860321.1                             I 1 C 0
s Panthera_tigris.KE722367.1                               4719882 16 -   8748460 gc----caaa--tt-ctatcaac--------------
i Panthera_tigris.KE722367.1                             I 1 C 0
s Papio_anubis.CM001495.2                                183440984 17 + 183742232 tc----aaaat-tt-----ccatc----------aac
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             4678 17 +     20448 tc----aaaat-tt-----ccatc----------aac
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20561486 17 +  20919399 tc----aaaat-tt-----ccatc----------aac
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   3422 17 +     41871 tc----aaaat-tt-----ccatc----------aac
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     6707 17 +     27711 tc----aaaat-tt-----ccatc----------aac
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  6787 17 +      9205 tc----aaaat-tt-----ccatc----------aac
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11497 16 -     78924 gc----aaaa--tt-ctatcaac--------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 1 C 0
s Piliocolobus_badius.k141_1234363                           41455 17 +     62158 tc----aaaat-tt-----ccatc----------aac
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        36186 17 +     89929 tc----aaaat-tt-----ccatc----------aac
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            37602 17 +     51399 tc----aaaat-tt-----ccatc----------aac
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14293840 17 -  14605196 tc----aaaat-tt-----ccatc----------aac
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189128920 17 + 189387572 tc----aaaat-tt-----ccatc----------aac
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9568528 17 +   9816681 tc----aaaat-tt-----ccatc----------aac
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               71117 17 -     81375 tc----aaaat-at-----ccatc----------aac
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              2937 17 +     19060 tc----aaaat-at-----ccatc----------aac
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 11480 13 -     22811 ca----a-gtccat-----caac--------------
i Procavia_capensis.ProCapCap_scaffold_85530             I 1 I 8
s Prolemur_simus.MPIZ01000396.1                            2595181 24 -   4620579 ac----ccaaa-tt--------atCAATAGGGTAAAT
i Prolemur_simus.MPIZ01000396.1                          I 1 C 0
s Propithecus_coquerelli.NW_012148875.1                     989175 14 +   2598838 tc----TAAGT-TT--------CC----------AAC
i Propithecus_coquerelli.NW_012148875.1                  I 1 C 0
s Propithecus_coronatus.k141_347390                          27485 14 +     38485 tc----taagt-tt--------cc----------aac
i Propithecus_coronatus.k141_347390                      I 1 C 0
s Propithecus_diadema.k141_357118                             3645 14 +      4256 tc----taagt-tt--------cc----------aac
i Propithecus_diadema.k141_357118                        I 1 C 0
s Propithecus_edwardsi.k141_1176054                          24998 14 +     35766 tc----taagt-tt--------cc----------aac
i Propithecus_edwardsi.k141_1176054                      I 1 C 0
s Propithecus_perrieri.k141_1200571                           3181 14 -     24134 tc----taagt-tt--------cc----------aac
i Propithecus_perrieri.k141_1200571                      I 1 C 0
s Propithecus_tattersalli.k141_790011                        27002 14 -     67325 tc----taagt-tt--------cc----------aac
i Propithecus_tattersalli.k141_790011                    I 1 C 0
s Propithecus_verreauxi.k141_956661                           3238 14 -      6182 tc----taagt-tt--------cc----------aac
i Propithecus_verreauxi.k141_956661                      I 1 C 0
s Pteronotus_parnellii.KE909381.1                            13544 17 -     21811 ta----aaaat-tc-ccagcacc--------------
i Pteronotus_parnellii.KE909381.1                        I 2 I 8
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39088 15 +     42204 gc----aaaa--tc--cttcaac--------------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 1 C 0
s Pteropus_alecto.KB030862.1                              22975634 17 +  28871421 at----aaaaa-tt-ctgtcaat--------------
i Pteropus_alecto.KB030862.1                             I 1 C 0
s Pteropus_vampyrus.KN525825.1                             1358723 17 +   4952924 at----aaaaa-tt-ctgtcaat--------------
i Pteropus_vampyrus.KN525825.1                           I 1 C 0
s Puma_concolor.QAVW01001104.1                            20273158 16 -  38429054 gc----caaa--tt-ctatcaac--------------
i Puma_concolor.QAVW01001104.1                           I 1 C 0
s Pygathrix_cinerea.k141_1153803                             12948 17 -     91421 tc----aaaat-tt-----ccatc----------aac
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7607074 17 +   7812017 tc----aaaat-tt-----ccatc----------aac
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             12922 17 -     72585 tc----aaaat-tt-----ccatc----------aac
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             4629 17 -     11128 tc----aaaat-tt-----ccatc----------aac
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91233985 17 - 195417433 tc----aaaat-tt-----ccatc----------aac
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7669634 17 +   7961872 tc----aaaat-tt-----ccatc----------aac
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                86645 17 -     96226 at----aaaat-tt-ctgtcaat--------------
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 1 C 0
s Saguinus_bicolor.k141_2619299                               5793 17 -      8359 tc----aaaat-tt-----ccatc----------agc
i Saguinus_bicolor.k141_2619299                          I 1 C 0
s Saguinus_geoffroyi.k141_1413670                            12075 17 -     13588 tc----aaaat-tt-----ccatc----------agc
i Saguinus_geoffroyi.k141_1413670                        I 1 C 0
s Saguinus_imperator.k141_717981                              5736 17 -      6207 tc----agaat-tt-----ccatc----------agc
i Saguinus_imperator.k141_717981                         I 1 C 0
s Saguinus_inustus.k141_699149                               11463 17 +     13640 tc----aaaat-tt-----ccatc----------agc
i Saguinus_inustus.k141_699149                           I 1 C 0
s Saguinus_labiatus.k141_285685                               6325 17 +      8564 tc----aaaat-tt-----ccatc----------agc
i Saguinus_labiatus.k141_285685                          I 1 C 0
s Saguinus_midas.LG03                                    209466607 17 + 209938924 tc----aaaat-tt-----ccatc----------agc
i Saguinus_midas.LG03                                    I 1 C 0
s Saguinus_mystax.k141_374627                                 5813 17 -      9399 tc----aaaat-tt-----ccatc----------agc
i Saguinus_mystax.k141_374627                            I 1 C 0
s Saguinus_oedipus.k141_63850                                 2940 17 +      3421 tc----aaaat-tt-----ccatc----------agc
i Saguinus_oedipus.k141_63850                            I 1 N 0
s Saimiri_boliviensis.NW_024100920.1                     119949159 17 - 121099817 tc----aaaat-tt-----ccaTC----------AGC
i Saimiri_boliviensis.NW_024100920.1                     I 1 C 0
s Saimiri_cassiquiarensis.k141_2188234                       21613 17 +     46362 tc----aaaat-tt-----ccatc----------agc
i Saimiri_cassiquiarensis.k141_2188234                   I 1 C 0
s Saimiri_macrodon.k141_716185                               21708 17 +     45824 tc----aaaat-tt-----ccatc----------agc
i Saimiri_macrodon.k141_716185                           I 1 C 0
s Saimiri_oerstedii.k141_1487881                             38336 17 -     64574 tc----aaaat-tt-----ccatc----------agc
i Saimiri_oerstedii.k141_1487881                         I 1 C 0
s Saimiri_sciureus.k141_2278166                               1342 17 -     23631 tc----aaaat-tt-----ccatc----------agc
i Saimiri_sciureus.k141_2278166                          I 1 C 0
s Saimiri_ustus.k141_1484609                                 21601 17 -     61129 tc----aaaat-tt-----ccatc----------agc
i Saimiri_ustus.k141_1484609                             I 1 C 0
s Semnopithecus_entellus.k141_11662                          17454 17 -     19888 tc----aaaat-tt-----ccatc----------aac
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      24657 17 +     39453 tc----aaaat-tt-----ccatc----------aac
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            5183 17 +     27826 tc----aaaat-tt-----ccatc----------aac
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             4703 17 -     19483 tc----aaaat-tt-----ccatc----------aac
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      4765 17 +      7198 tc----aaaat-tt-----ccatc----------aac
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         13025 17 +     15514 tc----aaaat-tt-----ccatc----------aac
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               2625 13 +   1910179 CC----AAAAG-Tt-----caat--------------
i Solenodon_paradoxus.SolPar_flattened_line_126          I 1 C 0
s Sorex_araneus.JH798187.1                                13649670 22 -  18376816 CAGGACAAAAA-TTTCCATCAAT--------------
i Sorex_araneus.JH798187.1                               I 1 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             29596 15 +     97271 gc----aaaa--tc--attcaac--------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 1 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              17177 16 -    196729 ac----aaaa--tt-ctagcaag--------------
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 C 0
s Sus_scrofa.JH118708.1                                      34374 17 -     47482 tg----aaaat-tt-ctacaaac--------------
i Sus_scrofa.JH118708.1                                  I 1 C 0
s Symphalangus_syndactylus.tarseq_199                      1091239 17 -   1523678 tc----aaaat-tt-----ccatc----------aac
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 9489 17 +     41958 at----taaat-tt-ccatcaac--------------
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 3 I 8
s Tamandua_tetradactyla.TamTet_scaffold_1782                 70990 14 +    116680 aa----atgctcat-----caac--------------
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 1 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      117612 17 -    156842 at----gaaac-gt-ccatcaac--------------
i Tapirus_indicus.TapInd_scaffold_9301                   I 3 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    386065 17 +    539355 at----aaaat-gt-ccatcaac--------------
i Tapirus_terrestris.TapTer_scaffold_755                 I 3 C 0
s Tarsius_lariang.k141_2201908                               24540 17 +     70052 tt----aaaat-tg-----ccatc----------aac
i Tarsius_lariang.k141_2201908                           I 1 C 0
s Tarsius_wallacei.k141_2029956                               3880 17 +      4644 tt----aaaat-tg-----ccatc----------aac
i Tarsius_wallacei.k141_2029956                          I 1 C 0
s Theropithecus_gelada.CM009954.1                        186426350 17 + 186847797 tc----aaaat-tt-----ccatc----------aac
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   3555 14 +      8208 aa----atgcccac-----caac--------------
i Tolypeutes_matacus.TolMat_scaffold_228639              I 1 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     79793 17 +    610378 ta----aaaat-ta-tcatcaac--------------
i Tonatia_saurophila.TonSau_scaffold_294                 I 2 I 8
s Trachypithecus_auratus.k141_722599                          8756 17 -     20410 tc----aaaat-tt-----ccatc----------aac
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    12950 17 +     15221 tc----aaaat-tt-----ccatc----------aac
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        8857 17 +     19930 tc----aaaat-tt-----ccatc----------aac
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       5286 17 -     19997 tc----aaaat-tt-----ccatc----------aac
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            45407 17 -     60166 tc----aaaat-tt-----ccatc----------aac
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        12879 17 -     27529 tc----aaaat-tt-----ccatc----------aac
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     12820 17 -     18194 tc----aaaat-tt-----ccatc----------aac
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           6553 17 -     21137 tc----aaaat-tt-----ccatc----------aac
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    5256 17 -     10723 tc----aaaat-tt-----ccatc----------aac
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         4408 17 +      9834 tc----aaaat-tt-----ccatc----------aac
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        22724 17 +     32220 tc----aaaat-tt-----ccatc----------aac
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5936823 17 +   6242583 tc----aaaat-tt-----ccatc----------aac
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        6072 17 +     20839 tc----aaaat-tt-----ccatc----------aac
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2154088 16 +   4065304 tc----agaat-TG-----Acacc----------a-a
i Tupaia_chinensis.KB320699.1                            I 1 I 1
s Tupaia_tana.TupTan_flattened_line_97126                     7745 16 -     10553 tc----agaat-tg-----acagc----------a-a
i Tupaia_tana.TupTan_flattened_line_97126                I 1 C 0
s Ursus_maritimus.KK499267.1                               4849285 15 -   5085361 gc----aaaa--ac--cttcaac--------------
i Ursus_maritimus.KK499267.1                             I 1 C 0
s Varecia_rubra.k141_590885                                   9846 14 +     50397 tc----taaat-tt--------cc----------aac
i Varecia_rubra.k141_590885                              I 1 C 0
s Varecia_variegata.k141_1128296                              9901 14 +     24756 tc----taaat-tt--------cc----------aac
i Varecia_variegata.k141_1128296                         I 1 C 0
s Vicugna_pacos.KN270157.1                                 5370749 17 -   5488506 tt----aaaat-tt-ccataaac--------------
i Vicugna_pacos.KN270157.1                               I 1 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          4011 15 +     86975 gc----aaaa--tc--catcaac--------------
i Zalophus_californianus.ZalCal_flattened_line_17732     I 1 C 0
e Echinops_telfairi.JH980293.1                            48778276  0 + 111700974 C
e Otolemur_garnettii.GL873799.1                             694317  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         2153  0 +      8798 C
e Galago_senegalensis.k141_631886                             2318  0 +     11339 C
e Galago_moholi.ctg2040                                     424611  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Chiropotes_albinasus.k141_2813271                           8451 841 +     11226 I
e Cebus_unicolor.k141_219506                                 14903  0 -     16904 I
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Mus_pahari.LT608297.1                                   31352818  0 -  89631738 C
e Mus_spretus.CM004101.1                                  90750234  0 - 130317789 C
e Mus_musculus.chr8                                       87648156  0 - 129401213 C
e Mus_caroli.LT608237.1                                   84359172  0 - 120012414 C
e Loris_tardigradus.ctg83                                  1002909  0 +   6120653 C
e Loris_lydekkerianus.k141_2539221                            4070  0 +     11245 C
e Perodicticus_potto.k141_1092580                             6662  0 +     25941 C
e Perodicticus_ibeanus.k141_855320                            8284  0 +     13100 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Xerus_inauris.XerIna_scaffold_48378                        22715  0 -     24430 C
e Vulpes_lagopus.VulLag_flattened_line_30954                  9730  0 -     43706 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   52652  8 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Spermophilus_dauricus.KZ294078.1                         1951468 299 -   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11304  0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152480  8 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rattus_norvegicus.chr16                                 53568239  0 +  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Psammomys_obesus.NESX01036370.1                             8401  0 -     21651 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18191985  0 -  18517816 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Pan_paniscus.KQ411613.1                                    41837 195 +     80009 I
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       461284  0 -    559221 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7577 1418 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    77382  0 +    102263 C
e Ondatra_zibethicus.OndZib_scaffold_46174                   22267 24 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105748257  0 + 199412804 C
e Nycticebus_coucang.k141_5327727                             5516  0 +      8486 C
e Nycticebus_bengalensis.LG01                            102577830  0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9148320  0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20299037 6819 +  31847680 I
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11258701  7 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    18126  0 -    145209 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12180532  2 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 30759  0 +    140813 C
e Marmota_marmota.CZRN01000018.1                          33100580 298 -  40650429 I
e Lycaon_pictus.CM007581.1                                17954062  0 -  59628241 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Ictidomys_tridecemlineatus.JH393364.1                    7518272 302 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Galagoides_demidoff.k141_1959596                            6126  0 +      6795 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Ellobius_talpinus.LOJH01109367.1                            3704  7 -      6299 I
e Ellobius_lutescens.LOEQ01008920.1                          17650  7 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089466 1162 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            62283 174 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    835315  0 +   1526836 C
e Cricetulus_griseus.LT883664.1                           11665468  2 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 48141  0 +     63868 C
e Condylura_cristata.JH655891.1                           17547413  8 -  53390261 I
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    136243  0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18499334  0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17957822  0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9033557  0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    184171  0 -    185531 C
e CanFam4.chr16                                           17798114  0 -  60362399 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Arctocebus_calabarensis.k141_2318572                        9644  0 +     14667 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      10117 439 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     72139 576 -     89534 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     68454  0 +     87051 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       4557 40 +     62944 TGG----TGAA----------T-----A----AATT---------C----TGG-TACATTTATAC-A-C-CT------GA-----ACTCTA
s Acinonyx_jubatus.LLWD01001279.1                           826176 33 -   1699592 tgg----tgaa----------t-----a----aact---------gtag-t----acattcata--c-aaat------g------------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 14
s Ailuropoda_melanoleuca.LNAT01000098.1                    9509434 33 -  29979442 tgg----tgaa----------t-----a----aact---------at-gat----acattcata--c-aatt------g------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 14
s Ailurus_fulgens.LNAC01001112.1                             78219 33 -    347723 tgg----tgaa----------t-----a----aact---------at-gat----acattcata--c-aact------g------------
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 14
s Allenopithecus_nigroviridis.k141_3361533                   12472 40 -     52922 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttatac-a-c-ct------ga-----attcta
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         12415 40 -     28001 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttatac-a-c-ct------ga-----attcta
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          2861 40 -     18505 tgg----tgag----------t-----a----aatt---------c----tgg-tacatttatac-a-c-ct------ga-----attcta
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           3710 40 -     12518 tgg----tgag----------t-----a----aatt---------c----tgg-tacatttatac-a-c-ct------ga-----attcta
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                              1271 40 -     27731 tgg----taaa----------t-----a----aatt---------g----tgg-tacatttatac-a-t-ct------gg-----atttta
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                1396 40 +      3134 tgg----taaa----------t-----a----aatt---------g----tgg-tacatttatac-a-t-ct------gg-----atttta
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               1531 40 -     45847 tgg----taaa----------t-----a----aatt---------g----tgg-tacatttatac-a-t-ct------gg-----atttta
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                22737 40 +     25266 tgg----taaa----------t-----a----aatt---------g----tgg-tacatttatac-a-t-ct------gg-----atttta
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           1921 40 +      2906 tgg----taaa----------t-----a----aatt---------g----tgg-tacatttatac-a-t-ct------gg-----atttta
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            16034 40 -     18578 tgg----taaa----------t-----a----aatt---------g----tgg-tacatttatac-a-t-ct------gg-----atttta
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              1421 40 +     47717 tgg----taaa----------t-----a----aatt---------g----tgg-tacatttatac-a-t-ct------gg-----atttta
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             1551 40 -      3544 tgg----taaa----------t-----a----aatt---------g----tgg-tacatttatac-a-t-ct------gg-----atttta
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             12771 40 +     50774 tgg----taaa----------t-----a----aact---------g----tgg-tacatttatac-a-t-ct------gg-----atttta
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183957 26 +    412891 ---------------------------a----aatt---------gtgg-t----acattcatg--c-aaca------ga-----------
i Anoura_caudifer.AnoCau_scaffold_1412                   I 8 I 6
s Aotus_azarae.k141_3104676                                  13392 40 -     33861 tgg----taaa----------t-----a----aatt---------g----tgg-tacatttatac-a-t-cc------ga-----atttta
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            13412 40 -     34016 tgg----taaa----------t-----a----aatt---------g----tgg-tacatttatac-a-t-cc------ga-----atttta
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4295809 40 -   5030052 tgg----taaa----------t-----a----aatt---------g----tgg-tacatttaTAC-A-T-CC------GA-----ATTTTA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             13414 40 -     34685 tgg----taaa----------t-----a----aatt---------g----tgg-tacatttatac-a-t-cc------ga-----atttta
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               26535 40 -     47192 tgg----taaa----------t-----a----aatt---------g----tgg-tacatttatac-a-t-cc------ga-----atttta
i Aotus_vociferans.k141_344750                           C 0 C 0
s Arctocebus_calabarensis.k141_2318572                        9644 10 +     14667 ----------------------------------------------------------------------tt------ga-----attcta
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3369 26 +     43469 ---------------------------a----aatt---------gtgg-t----accttcatg--c-aact------ga-----------
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 8 I 6
s Avahi_laniger.k141_765380                                  52135 40 -     92717 tgg----caaa----------t-----a----aatt---------g----tga-tacattcatat-a-a-tt------ta-----attcta
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              52764 40 +     85213 tgg----caaa----------t-----a----aatt---------g----tga-tacattcatat-a-a-tt------ta-----attcta
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             3153 40 -     10423 ggg----taag----------t-----c----aatc---------g----tgg-tacatttatac-a-t-ct------ga-----atttta
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             22654 40 +     31915 agg----taaa----------t-----a----aatc---------g----tgg-tacatttatac-a-t-tt------ga-----atttta
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            3123 40 +      5267 ggg----taag----------t-----c----aatc---------g----tgg-tacatttatac-a-t-ct------ga-----atttta
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23588337 40 - 189096842 GGG----TAAG----------T-----C----AATC---------G----TGG-TACATTTATAC-A-T-CT------GA-----ATTTTA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              9867 40 -     12001 ggg----taag----------t-----c----aatc---------a----tgg-tacatttatac-a-t-ct------ga-----atttta
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10001279 33 -  17673402 tgg----tgaa----------t-----a----aatt---------gtgg-t----acattcaca--c-aact------g------------
i Camelus_bactrianus.KN276810.1                          C 0 I 4
s Camelus_dromedarius.KN272107.1                           2333737 33 -   7040546 tgg----tgaa----------t-----a----aatt---------gtgg-t----acattcaca--c-aact------g------------
i Camelus_dromedarius.KN272107.1                         C 0 I 4
s Camelus_ferus.KB017975.1                                  402019 33 -   1652518 tgg----tgaa----------t-----a----aatt---------gtgg-t----acattcaca--c-aact------g------------
i Camelus_ferus.KB017975.1                               C 0 I 4
s Carlito_syrichta.NW_007259797.1                           154435 40 -    496798 TGG----TAAA----------T-----A----CATT---------G----TGG-TGCATTCATAT-A-C-TT------AA-----ATTCTG
i Carlito_syrichta.NW_007259797.1                        C 0 I 12
s Carollia_perspicillata.CarPer_scaffold_92756                3731 26 -     11696 ---------------------------a----aatt---------gtgg-t----acattcacg--c-aact------ga-----------
i Carollia_perspicillata.CarPer_scaffold_92756           I 8 I 6
s Catagonus_wagneri.CatWag_scaffold_2839                     91876 30 +    217609 tag----tgaa----------t-----a----acat---------g----t----acattcata--c-aatt------g------------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 3
s Cebuella_niveiventris.k141_1251222                          7777 40 -     11392 ggg----taag----------t-----c----aatc---------g----tgg-tacatttatac-a-t-ct------ga-----atttta
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               3875 40 -      7577 ggg----taag----------t-----c----aatc---------g----tgg-tacatttatac-a-t-ct------ga-----atttta
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_olivaceus.k141_1000828                                1813 40 -      2944 tgg----taaa----------t-----a----aatt---------g----tgg-tatatttatac-a-t-ct------ga-----atttta
i Cebus_olivaceus.k141_1000828                           C 0 I 231
s Cephalopachus_bancanus.k141_1423433                         3946 40 +     31688 tgg----taaa----------t-----a----catt---------g----tgg-tgcattcatat-a-c-tt------aa-----attctg
i Cephalopachus_bancanus.k141_1423433                    C 0 I 12
s Ceratotherium_simum.JH767749.1                          12230306 43 +  27778364 tga----tgaa----------t-----agataaatt----g--tgg----t----acattcata--c-agctgaattcg------------
i Ceratotherium_simum.JH767749.1                         C 0 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1333 43 -     25243 tga----tgaa----------t-----agataaatt----g--tgg----t----acattcata--c-agctgaattcg------------
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 I 1
s Cercocebus_atys.KQ010504.1                               4473427 40 +   4669795 tgg----tgaa----------t-----a----aATT---------C----TGG-TACATTTATAC-A-C-CT------GA-----ATTCTA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        11976 40 -     19203 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttatac-a-c-ct------ga-----attcta
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           6398 40 +      8260 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttatac-a-c-ct------ga-----attcta
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           6624 40 +     27781 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttatac-a-c-ct------ga-----attcta
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         6782 40 -     20310 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttatac-a-c-tt------ga-----attcta
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           9761 40 +     29689 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttatac-a-c-ct------ga-----attcta
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            4192 40 +      9989 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttatac-a-c-ct------ga-----attctc
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          12440 40 -     27936 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttatac-a-c-tt------ga-----attcta
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            1317 40 -     17152 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttatac-a-c-tt------ga-----attcta
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38814844 40 +  39242232 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttatac-a-c-tt------ga-----attcta
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21220546 40 -  21565898 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttatac-a-c-tt------aa-----attcta
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       37664 40 -     53127 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttatac-a-c-ct------ga-----attcta
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        4924 40 +      7159 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttatac-a-c-tt------ga-----attcta
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       12467 40 -     27947 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttatac-a-c-tt------ga-----aatcta
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         12440 40 +     17596 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttatac-a-c-tt------ga-----attcta
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          1663 40 +     26000 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttatac-a-c-ct------ga-----attcta
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_713168              14 48 -      2554 tgg----taaa----------t-----a----cataaacaga-tcg----tgg-tacattcata--c-aact------ga-----acccta
i Chaetophractus_vellerosus.ChaVel_scaffold_713168       C 0 C 0
s Cheirogaleus_major.k141_333249                             19544 40 -     52598 tgg----tgaa----------t-----a----aatt---------g----tga-tacactcgtat-a-a-tt------ga-----attcta
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           14895 40 +     57038 tgg----tgaa----------t-----a----aatt---------g----tga-tacattcatat-a-a-tt------ga-----attcta
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chlorocebus_aethiops.ctg25                              18426413 40 -  18827391 tgg----taag----------t-----a----aatt---------c----tgg-tacatttatac-a-c-ct------ga-----attcta
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       12850 40 -     50209 tgg----taag----------t-----a----aatt---------c----tgg-tacatttatac-a-c-ct------ga-----attcta
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135419850 40 + 135778131 TGG----TAAG----------T-----A----AATT---------C----TGG-TACATTTATAC-A-C-CT------GA-----ATTCTA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 16726 48 +     19366 agg----taaa----------c-----a----gataaacaaa-tag----tag-tacattcata--c-aaat------ga-----agtcta
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            171825 48 +    839153 agg----taaa----------c-----a----gataaacaaa-tcg----tag-tacattcata--c-aaat------ga-----agtcta
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_2561901               347 47 -       464 tgg----ttac----------t-----a----gattaagaaa-ttg----taa-tacatttatg--g-g-at------tc-----attcta
i Chrysochloris_asiatica.ChrAsi_scaffold_2561901         C 0 n 0
s Colobus_angolensis.KN981557.1                            1908365 40 +   2368649 tgg----tgaa----------t-----a----aATT---------C----TGG-TACGTTTATAC-A-C-CT------GA-----ATTCTA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199948041 40 + 200372422 tgg----tgaa----------t-----a----aatt---------c----tgg-tacgtttatac-a-c-ct------ga-----attcta
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              34903 40 +     84244 tgg----tgaa----------t-----a----aatt---------c----tgg-tacgtttatac-a-c-ct------ga-----attcta
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          12865 44 -     20389 tgg----tgaat--aga----t-----a----aatt---------g----tgg-tacatttgta--c-agct------ga-----actcta
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 385
s Crocidura_indochinensis.CroInd_scaffold_37019               1654 46 -     19598 TAG----TAAT----------TAGATAA----AATT---------A----TGCTTGCATTCATG--CAA-CT------GA-----ATTGCT
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27352 33 -     87169 tgg----tgaa----------t-----a----aatt---------gtgg-t----acattaata--c-aact------g------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 24
s Daubentonia_madagascariensis.ctg71                      12535758 39 -  12879189 tgg----tg-a----------t-----a----aatt---------g----tga-tacattcatat-a-a-tt------ga-----attcta
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8628763 26 +  20541912 ---------------------------a----aatt---------gggg-t----acattcatg--c-agct------ga-----------
i Desmodus_rotundus.KZ672289.1                           I 8 I 6
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672156 43 +   1390856 tga----tgaa----------t-----agataaatt----g--tgg----t----acattcata--c-aactgaattcg------------
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 1
s Diceros_bicornis.DicBicMic_scaffold_5955                    4909 43 +    198055 tga----tgaa----------c-----agataaatt----g--tgg----t----acattcgta--c-agctgaattcg------------
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 1
s Eidolon_helvum.KE759718.1                                   9388 44 +     11740 caa----tgaa--gaga----t-----a----aatt---------g----agg-tacattcata--t-aatt------ga-----aattta
i Eidolon_helvum.KE759718.1                              C 0 I 8
s Enhydra_lutris.KZ291758.1                               16328187 33 -  41312741 tgg----tgaa----------t-----a----aact---------gt-gat----acagtcata--c-aatt------g------------
i Enhydra_lutris.KZ291758.1                              C 0 I 14
s Equus_asinus.JREZ01000139.1                              1282218 43 +   4378816 tgg----tgaa----------t-----agataaact----g--tga----t----acattcata--c-aactgaattct------------
i Equus_asinus.JREZ01000139.1                            C 0 I 1
s Equus_caballus.CM000403.2                               18530039 43 -  39960074 tgg----tgaa----------g-----agataaact----g--tga----t----acattcata--c-aactgaattct------------
i Equus_caballus.CM000403.2                              C 0 I 1
s Equus_przewalskii.KK951119.1                               32054 43 +    498745 tgg----tgaa----------g-----agataaact----g--tga----t----acattcata--c-aactgaattct------------
i Equus_przewalskii.KK951119.1                           C 0 I 1
s Erythrocebus_patas.Contig38                             21203050 11 -  21539334 --------------------------------------------------------------------c-ct------ga-----attcta
i Erythrocebus_patas.Contig38                            I 11 C 0
s Eulemur_albifrons.k141_342033                              12239 40 -     14127 tgg----tgaa----------a-----t----aatt---------g----tga-cacattcatat-a-a-tt------ga-----attcta
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                4937 40 -     16928 tgg----tgaa----------a-----t----aatt---------g----tga-cacattcatat-a-a-tt------ga-----attcta
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              13974 40 -     25546 tgg----tgaa----------t-----a----aatt---------g----tga-cacattcatat-a-a-tt------ga-----attcta
i Eulemur_coronatus.k141_885031                          C 0 I 17
s Eulemur_flavifrons.k141_1184614                            11164 40 +     26330 tgg----tgaa----------t-----a----aatt---------g----tga-cacattcatat-a-a-ct------ga-----attcta
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 12403 40 +     23973 tgg----tgaa----------a-----t----aatt---------g----tga-cacattcatat-a-a-tt------ga-----attcta
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                11164 40 +     75513 tgg----tgaa----------t-----a----aatt---------g----tga-cacattcatat-a-a-ct------ga-----attcta
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  9106 40 +     97555 tgg----tgaa----------a-----t----aatt---------g----tga-cacattcatat-a-a-tt------ga-----attcta
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            12042 40 +     26496 tgg----tgaa----------t-----a----aatt---------g----tga-cacattcatat-a-a-tt------ga-----attcta
i Eulemur_rubriventer.k141_571033                        C 0 I 17
s Eulemur_rufus.k141_1476633                                  2639 40 -     17153 tgg----tgaa----------a-----t----aatt---------g----tga-cacattcatat-a-a-tt------ga-----attcta
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              12215 40 +    111500 tgg----tgaa----------a-----t----aatt---------g----tga-cacattcatat-a-a-tt------ga-----attcta
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20236045 33 + 206538554 tgg----tgaa----------t-----a----aact---------gtgg-t----acattcata--c-aact------g------------
i Felis_catus.CM001381.2                                 C 0 I 14
s Felis_catus_fca126.CM031415.1                           20194888 33 + 205367284 tgg----tgaa----------t-----a----aact---------gtgg-t----acattcata--c-aact------g------------
i Felis_catus_fca126.CM031415.1                          C 0 I 14
s Felis_nigripes.FelNig_flattened_line_20823                  8402 33 -     36744 tgg----tgaa----------t-----a----aact---------gtgg-t----acattcata--c-aact------g------------
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 14
s Galago_moholi.ctg2040                                     424611  8 -    453645 ----------------------------------------------------------------------tt------ga-----attc--
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             2318  8 +     11339 ----------------------------------------------------------------------tt------ga-----attc--
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1959596                            6126  8 +      6795 ----------------------------------------------------------------------tt------ga-----attc--
i Galagoides_demidoff.k141_1959596                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_197845               2497 40 -      3123 tgg----tgaa----------t-----a----catt---------c----tga-tacattcacat-a-a-tt------ga-----attcta
i Galeopterus_variegatus.GalVar_scaffold_197845          C 0 C 0
s Gorilla_beringei.k141_3596273                              13809 40 -     32273 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttatac-a-c-ct------ga-----actcta
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186335957 40 + 186649187 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttatac-a-c-ct------ga-----actcta
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           5295 40 -     19426 tgg----tgaa----------t-----a----aatt---------g----tga-cacattcatat-a-a-tt------ga-----attcta
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             10444 40 -     15286 tgg----tgaa----------t-----a----aatt---------g----tga-cacattcatat-a-a-tt------ga-----attcta
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             12083 40 +     18253 tgg----tgaa----------t-----a----aatt---------g----tga-cacattcatat-a-a-tt------ga-----attcta
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         12184 40 -     41752 tgg----tgaa----------t-----a----aatt---------g----tga-cacattcatat-a-a-tt------ga-----attcta
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         12022 40 -     16460 tgg----tgaa----------t-----a----aatt---------g----tga-cacattcatat-a-a-tt------ga-----attcta
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               241192 33 +    327341 tgg----tgaa----------t-----a----aatt---------gtgg-t----acagtcata--c-aact------g------------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 21
s Heterohyrax_brucei.HetBruBak_scaffold_403422                 508 35 -       893 -----------------------------------aaataaa-ttg----caa-tgcatttaca--g-a-at------ta-----attcta
i Heterohyrax_brucei.HetBruBak_scaffold_403422           I 8 I 63
s Hipposideros_armiger.JXIK01000431.1                       110668 32 +   1711038 ---------------------------a----aatt---------g----tgg-tatatttata--c-cact------ga-----attcta
i Hipposideros_armiger.JXIK01000431.1                    I 8 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               42086 44 +     43066 tgg----tgaat--aga----t-----a----aatt---------g----tgg-tacatttaca--c-cagt------ga-----attcta
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    432621 40 +    630532 tgg----tgaa----------t-----a----aatt---------c----cgg-tacatttatac-a-c-ct------ga-----actcta
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  43329 33 +     55795 tgg----tgaa----------a-----a----aatt---------gtgg-t----acattcata--c-aact------g------------
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 23
s Hylobates_agilis.k141_232023                                 387 40 -     12752 tgg----taaa----------t-----a----aatt---------c----tgg-tacatttatac-a-c-ct------ga-----actcta
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                                431 40 +     14092 tgg----taaa----------t-----a----aatt---------c----tgg-tacatttatac-a-c-ct------ga-----actcta
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189541214 40 - 191637585 tgg----taaa----------t-----a----aatt---------c----tgg-tacatttatac-a-c-ct------ga-----actcta
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3334108 40 -  11177569 tgg----taaa----------t-----a----aatt---------c----tgg-tacatttatac-a-c-ct------ga-----actcta
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_3655594                                   20987 40 +     31101 tgg----caaa----------t-----a----aatt---------g----tga-tacattcatat-a-a-tt------ga-----attcta
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15522527 40 -  30322482 tgg----tgaa----------t-----a----aatt---------g----tga-cacattcatat-a-a-tc------ga-----attcta
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        5496 40 +     64341 tgg----taaa----------t-----a----aatt---------g----tgg-tacatttatac-a-t-ct------ga-----atttta
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           2557 40 +      4941 tgg----taaa----------t-----a----aatc---------g----tgg-tacatttatac-a-t-ct------ga-----atttta
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        5425 40 +     35603 tgg----taaa----------t-----a----aatc---------g----tgg-tacatttatac-a-t-ct------ga-----atttta
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    26913 40 +     38576 ggg----taaa----------t-----a----aatc---------g----tgg-tacatttatac-a-t-ct------ga-----atttta
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         23610 40 +     66356 ggg----taaa----------t-----a----aatc---------g----tgg-tacatttatac-a-t-ct------ga-----atttta
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          9434 40 -     23766 tgg----tgaa----------t-----a----aatt---------g----tga-tacattcatgt-a-a-tt------ga-----attcta
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             27500 40 +     45836 tgg----tgaa----------t-----a----aatt---------g----tga-tacattcatgt-a-a-tt------ga-----attcta
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_667017                          2036 40 -      2151 tgg----tgaa----------t-----a----aatt---------g----tga-tacattcatat-a-a-tt------ga-----attcta
i Lepilemur_ruficaudatus.k141_667017                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      25436 40 +     54090 tgg----tgaa----------t-----a----aatt---------g----tga-tacattcatgt-a-a-tt------ga-----attcta
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3041725 33 +   3914936 tgg----taaa----------t-----a----aact---------gt-gat----acattcata--c-aatt------g------------
i Leptonychotes_weddellii.KB714746.1                     C 0 I 14
s Lepus_americanus.LepAme_scaffold_107385                     4404 27 -     14121 tgg----tgaa----------c-----a----aatt---------c----tag-aacatacata---------------------------
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 7
s Lophocebus_aterrimus.ctg367                              1434974 40 +   1826925 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttatac-a-c-ct------ga-----attcta
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            4070 10 +     11245 ----------------------------------------------------------------------tt------aa-----attcta
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1002909 10 +   6120653 ----------------------------------------------------------------------tt------aa-----attcta
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4215845 47 -  43346337 tgg----tgaa----------g-----a----gataaggaaa-tcg----tag-tacgtttata--g-a-ct------ta-----attcta
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Macaca_arctoides.k141_2326796                               4789 40 +     40492 tgg----tgaa----------t-----a----aatt---------c----cgg-tacatttatac-a-c-ct------ga-----attcta
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59674051 40 +  60120075 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttatac-a-c-ct------ga-----attcta
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 10545 40 -     26193 tgg----tgaa----------t-----a----catt---------c----cgg-tacatttatac-a-c-ct------ga-----attcta
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            78349 40 -    114318 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttatac-a-c-ct------ga-----attcta
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  4048 40 -     23192 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttatac-a-c-ct------ga-----attcta
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                13509 40 -     29190 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttatac-a-c-ct------ga-----attcta
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  22076 40 +     37952 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttatac-a-c-ct------ga-----attcta
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186837164 40 + 187317192 tgg----tgaa----------t-----a----aaTT---------C----TGG-TACATTTATAC-A-C-CT------GA-----ATTCTA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25455726 40 -  25927173 tgg----tgaa----------t-----a----aaTT---------C----TGG-TACATTTATAC-A-C-CT------GA-----ATTCTA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  77925 40 +     89720 tgg----tgag----------t-----a----aatt---------c----tgg-tacatttatac-a-c-ct------ga-----attcta
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 4922 40 +     20474 tgg----tgaa----------t-----a----aatt---------c----cgg-tacatttatac-a-c-ct------ga-----attcta
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   4723 40 -     14993 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttatac-a-c-ct------ga-----attcta
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  327594 40 -    668171 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttatac-a-c-ct------ga-----attcta
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 3034 40 -     24072 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttatac-a-c-ct------ga-----attcta
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               23663 40 -     45290 tgg----cgaa----------t-----a----aatt---------c----tgg-tacatttatac-a-c-ct------ga-----attcta
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 89481 44 +     94391 caa----tgaat--aga----t-----a----aatt---------g----tgg-tacattcata--t-aatt------ga-----actcta
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23935247 40 -  24302211 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttatac-a-c-ct------ga-----attcta
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               349379 40 +    752769 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttatac-a-c-ct------ga-----attcta
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              18332 20 +    737560 TGG----TAAA----------G-----A----AATT---------C----T----ACTTT-------------------------------
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              50321 20 -    317179 TGG----TAAA----------T-----A----AATT---------C----T----ACTTT-------------------------------
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         9207 41 -    207569 tga----tgaat--aga----t-----a----aatt---------g----tgg-tacattccta--c-gatg------ga-----act---
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 22
s Mellivora_capensis.MelCap_flattened_line_69365              8904 33 +     13704 tgg----tgaa----------t-----a----aact---------gt-gat----acattcata--c-aatt------g------------
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 14
s Mico_argentatus.k141_1239457                                3699 40 -      7380 ggg----taag----------t-----c----aatc---------g----tgg-tacatttatac-a-t-ct------ga-----atttta
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               2765 40 +     18990 ggg----taag----------t-----c----aatc---------g----tgg-tacatttatac-a-t-ct------ga-----atttta
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      3704 40 -      7356 ggg----taag----------t-----c----aatc---------g----tgg-tacatttatac-a-t-ct------ga-----atttta
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18289936 40 -  93316391 TGG----TGCA----------T-----A----AATt---------g----tga-tacattcatat-a-a-tt------ga-----attcta
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                14277 26 -     19307 ---------------------------a----aatg---------gtgg-t----acattcatg--c-gact------ga-----------
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 8 I 6
s Miopithecus_ogouensis.k141_534055                           6970 40 -     28506 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttatac-a-c-ct------ga-----attcta
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         4593 33 -      8324 tgg----tgaa----------t-----a----aact---------gt-gat----acattcata--c-aatt------g------------
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 14
s Mirza_zaza.k141_952172                                      7508 40 -     37649 tgg----tgaa----------t-----a----aatt---------g----tga-tacattcatat-a-a-tt------ga-----cttcta
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140189 30 -    366855 ---------------------------agataaatt---------atgg-t----acgttcatg--c-aatt------ga-----------
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 8 I 6
s Mungos_mungo.MunMun_flattened_line_23663                   34304 33 +     37127 tgg----taaa----------t-----a----aatt---------gtgg-t----acagtcata--c-aact------g------------
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 21
s Mustela_putorius.JH418006.1                               300081 33 -  14710649 tgg----tgaa----------t-----a----aact---------gtag-t----atattcata--c-aatt------g------------
i Mustela_putorius.JH418006.1                            C 0 I 14
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187652 48 +    196477 tgg----aaaa----------t-----a----gataaa-agactca----tag-tacatccatc--t-aatc------aa-----agtcta
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nasalis_larvatus.k141_413338                               12966 40 +     21681 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttacac-a-c-ct------ga-----attctg
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20305856 28 +  31847680 ---------aa----------t-----a----aact---------gt-gat----acattcata--c-aatt------g------------
i Neomonachus_schauinslandi.NINY01007730.1               I 6819 I 14
s Nycticebus_bengalensis.LG01                            102577830 10 - 196305487 ----------------------------------------------------------------------tt------aa-----attcta
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             5516 10 +      8486 ----------------------------------------------------------------------tt------aa-----attcta
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105748257 10 + 199412804 ----------------------------------------------------------------------tt------aa-----attcta
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         2153  8 +      8798 ----------------------------------------------------------------------tt------ga-----actc--
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             694317  8 -   1103335 ----------------------------------------------------------------------TT------GA-----ATTC--
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ochotona_princeps.JH802162.1                             1361457 27 +   3988456 tag----tgaa----------c-----a----aatt---------c----tat-aatattagta---------------------------
i Ochotona_princeps.JH802162.1                           C 0 I 12
s Odobenus_rosmarus.KB229312.1                              505532 14 -   2017862 tgg----tgaa----------t-----a----aact---------g---------------------------------------------
i Odobenus_rosmarus.KB229312.1                           C 0 I 19
s Oryctolagus_cuniculus.CM000791.1                        67145249 27 + 174332312 tgg----tgaa----------c-----a----aatt---------c----tag-aacatacata---------------------------
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 7
s Pan_troglodytes.CM009242.2                             189140818 23 + 189151597 tgg----tgaa----------t-----a----aaTT---------C----TGG-TACATT-------------------------------
i Pan_troglodytes.CM009242.2                             C 0 I 186
s Panthera_onca.PanOnc_flattened_line_3271                  150055 33 +    230217 tgg----cgaa----------t-----a----aact---------gtgg-t----acattcata--c-aact------g------------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 14
s Panthera_pardus.KV860321.1                                263260 33 +  18783137 tgg----cgaa----------t-----a----aact---------gtgg-t----acattcata--c-aact------g------------
i Panthera_pardus.KV860321.1                             C 0 I 14
s Panthera_tigris.KE722367.1                               4719898 33 -   8748460 tgg----cgaa----------t-----a----aact---------gtgg-t----acattcata--c-aact------g------------
i Panthera_tigris.KE722367.1                             C 0 I 14
s Papio_anubis.CM001495.2                                183441001 40 + 183742232 tgg----tgaa----------t-----a----aATT---------C----TGG-TACATTTATAC-A-C-CT------GA-----ATTCTA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             4695 40 +     20448 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttatac-a-c-ct------ga-----attcta
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20561503 40 +  20919399 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttatac-a-c-ct------ga-----attcta
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   3439 40 +     41871 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttatac-a-c-ct------ga-----attcta
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     6724 40 +     27711 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttatac-a-c-ct------ga-----attcta
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  6804 40 +      9205 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttatac-a-c-ct------ga-----attcta
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11513 33 -     78924 tgg----ttaa----------t-----a----aact---------gtgg-c----acattcata--g-aatt------g------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 14
s Perodicticus_ibeanus.k141_855320                            8284 10 +     13100 ----------------------------------------------------------------------tt------ga-----tttcta
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             6662 10 +     25941 ----------------------------------------------------------------------tt------ga-----attcta
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Piliocolobus_badius.k141_1234363                           41472 40 +     62158 tgg----tgaa----------t-----a----aatt---------c----tgg-tacgtttatac-a-c-ct------ga-----attcta
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        36203 40 +     89929 tgg----tgaa----------t-----a----aatt---------c----tgg-tacgtttatac-a-c-ct------ga-----attcta
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            37619 40 +     51399 tgg----tgaa----------t-----a----aatt---------c----tgg-tacgtttatac-a-c-ct------ga-----attcta
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14293857 40 -  14605196 tgg----tgaa----------t-----a----aATT---------C----TGG-TACGTTTATAC-A-C-CT------GA-----ATTCTA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189128937 40 + 189387572 tgg----tgaa----------t-----a----aaTT---------C----TGG-TACATTTATAC-A-C-CT------GA-----ACTCTA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9568545 40 +   9816681 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttatac-a-c-ct------ga-----actcta
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               71134 40 -     81375 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttacac-a-c-ct------ga-----attctg
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              2954 40 +     19060 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttacac-a-c-ct------ga-----attctg
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 11501 35 -     22811 -----------------------------------aaataaa-ttg----caa-tgcatttaca--g-a-at------ta-----attcta
i Procavia_capensis.ProCapCap_scaffold_85530             I 8 C 0
s Prolemur_simus.MPIZ01000396.1                            2595205 40 -   4620579 GGG----CAAA----------T-----A----AATT---------G----TGT-TGTATTTATAT-A-C-tg------ga-----attcta
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     989189 40 +   2598838 TGG----CAAt----------t-----a----aatt---------t----tga-tacattcatat-a-a-tt------ga-----attcta
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          27499 40 +     38485 tgg----caat----------t-----a----aatt---------t----tga-tacattcatat-a-a-tt------ga-----attcta
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             3659 40 +      4256 tgg----caat----------t-----a----aatt---------t----tga-tacattcatat-a-a-tt------ga-----attcta
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          25012 40 +     35766 tgg----caat----------t-----a----aatt---------t----tga-tacattcatat-a-a-tt------ga-----attcta
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           3195 40 -     24134 tgg----caat----------t-----a----aatt---------t----tga-tacattcatat-a-a-tt------ga-----attcta
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        27016 40 -     67325 tgg----caat----------t-----a----aatt---------t----tga-tacattcatat-a-a-tt------ga-----attcta
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           3252 40 -      6182 tgg----caat----------t-----a----aatt---------t----tga-tacattcatat-a-a-tt------ga-----attcta
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            13569 30 -     21811 ---------------------------agaaaaatt---------gt-gat----atgttcatg--c-aatc------ga-----------
i Pteronotus_parnellii.KE909381.1                        I 8 I 6
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39103 33 +     42204 tgg----tgaa----------t-----a----aact---------gt-gat----acattcata--c-aatt------g------------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 14
s Pteropus_alecto.KB030862.1                              22975651 44 +  28871421 caa----tgaat--aga----t-----a----aatt---------g----cgg-tacattcata--t-aatt------ga-----actaca
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1358740 41 +   4952924 c-------gaat--aga----t-----a----aatt---------g----cgg-tacattcata--t-aatt------ga-----actaca
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20273174 33 -  38429054 tgg----tgaa----------t-----a----aact---------gtgg-t----acattcata--c-aact------g------------
i Puma_concolor.QAVW01001104.1                           C 0 I 14
s Pygathrix_cinerea.k141_1153803                             12965 40 -     91421 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttacac-a-c-ct------ga-----attctg
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7607091 40 +   7812017 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttacac-a-c-ct------ga-----attctg
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             12939 40 -     72585 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttacac-a-c-ct------ga-----attctg
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             4646 40 -     11128 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttacac-a-c-ct------ga-----attctg
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91234002 40 - 195417433 tgg----tgaa----------t-----a----aATT---------C----TGG-TACATTTACAC-A-C-CT------GA-----ATTCTG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7669651 40 +   7961872 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttacac-a-c-ct------ga-----attctg
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                86662 44 -     96226 caa----taaat--aga----t-----a----aatt---------g----tgg-tacactcatt--t-aatt------ta-----actctg
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               5810 40 -      8359 tgg----taaa----------t-----a----aatc---------g----tgg-tacatttatac-a-t-ct------ga-----atttta
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_imperator.k141_717981                              5753 40 -      6207 tgg----taaa----------t-----a----aatc---------a----tcg-tacatttatac-a-t-ct------ga-----atttta
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               11480 40 +     13640 tgg----taaa----------t-----a----aatc---------a----tcg-tacatttatac-a-t-ct------ga-----atttta
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               6342 40 +      8564 tgg----taaa----------t-----a----aatc---------a----tcg-tacatttatac-a-t-ct------ga-----atttta
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209466624 40 + 209938924 tgg----taaa----------t-----a----aatc---------g----tgg-tacatttatac-a-t-ct------ga-----atttta
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 5830 40 -      9399 tgg----taaa----------t-----a----aatc---------a----tcg-tacatttatac-a-t-ct------ga-----atttaa
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119949176 40 - 121099817 tgg----taaa----------t-----a----aact---------g----tgg-tacatttatAC-A-T-CT------GA-----ATTTTA
i Saimiri_boliviensis.NW_024100920.1                     C 0 I 6
s Saimiri_cassiquiarensis.k141_2188234                       21630 40 +     46362 tgg----taaa----------t-----a----aact---------g----tgg-tacatttatac-a-t-ct------ga-----atttta
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               21725 40 +     45824 tgg----taaa----------t-----a----aact---------g----tgg-tacatttatac-a-t-ct------ga-----atttta
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             38353 40 -     64574 tgg----taaa----------t-----a----aact---------g----tgg-tacatttatac-a-t-ct------ga-----atttta
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               1359 40 -     23631 tgg----taaa----------t-----a----aact---------g----tgg-tacatttatac-a-t-ct------ga-----atttta
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 21618 40 -     61129 tgg----taaa----------t-----a----aact---------g----tgg-tacatttatac-a-t-ct------ga-----atttta
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          17471 40 -     19888 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttacac-a-c-ct------ga-----attctg
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      24674 40 +     39453 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttacac-a-c-ct------ga-----attctg
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            5200 40 +     27826 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttacac-a-c-ct------ga-----attctg
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             4720 40 -     19483 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttacac-a-c-ct------ga-----attctg
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      4782 40 +      7198 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttacac-a-c-ct------ga-----attctg
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         13042 40 +     15514 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttacac-a-c-ct------ga-----attctg
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               2638 39 +   1910179 tag----tgaa----------t-----a----aatt---------a----tga-gacatttata--c-a-ct------ga-----attata
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13649692 45 -  18376816 GAA----TGAT----------TAGATAA----AATT---------G----TGC-TGCACTCATG--AAG-CT------GA-----ATTGCT
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             29611 33 +     97271 tgg----tgaa----------t-----a----aact---------gt-gat----acattcatg--c-actt------g------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 14
s Suricata_suricatta.SurSur_flattened_line_6629              17193 33 -    196729 tgg----tcaa----------t-----a----aatt---------gtgg-t----acattcata--c-aact------g------------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 21
s Sus_scrofa.JH118708.1                                      34391 30 -     47482 tag----tgaa----------t-----a----attt---------g----t----acattcata--c-gatt------g------------
i Sus_scrofa.JH118708.1                                  C 0 I 1
s Symphalangus_syndactylus.tarseq_199                      1091256 40 -   1523678 tgg----taaa----------t-----a----aatt---------c----tgg-tacatttatac-a-c-ct------ga-----actcta
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 9514 32 +     41958 ---------------------------a----aatt---------g----tgg-cacattcata--c-agtt------ga-----actcta
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 8 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 71004 48 +    116680 tgg----taaa----------t-----a----gataaa-agactca----tag-tacatccata--t-aatc------aa-----agtcta
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      117629 43 -    156842 tgg----tgaa----------t-----agacaaata----g--tgg----t----acattcata--c-aactgaattct------------
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 1
s Tapirus_terrestris.TapTer_scaffold_755                    386082 43 +    539355 tgg----tgaa----------t-----agacgaata----g--tgg----t----acattcatg--c-aactgaattct------------
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 1
s Tarsius_lariang.k141_2201908                               24557 40 +     70052 tga----taaa----------t-----a----catt---------g----tgg-tgcattcatat-a-c-tt------aa-----attctg
i Tarsius_lariang.k141_2201908                           C 0 I 12
s Tarsius_wallacei.k141_2029956                               3897 40 +      4644 tgg----taaa----------t-----a----catt---------g----tgg-tgcattcatat-a-c-tt------aa-----attctg
i Tarsius_wallacei.k141_2029956                          C 0 I 12
s Theropithecus_gelada.CM009954.1                        186426367 40 + 186847797 tgg----tgaa----------t-----a----aATT---------C----TGG-TACATTTATAC-A-C-CT------GA-----ATTCTA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   3569 48 +      8208 tgg----taaa----------t-----a----gataaataaa-tta----tgg-tacattcata--c-aact------ga-----atctta
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     79818 26 +    610378 ---------------------------t----aatt---------acgg-t----acattcatg--c-aact------ga-----------
i Tonatia_saurophila.TonSau_scaffold_294                 I 8 I 6
s Trachypithecus_auratus.k141_722599                          8773 40 -     20410 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttacac-a-c-ct------ga-----attctg
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    12967 40 +     15221 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttacac-a-c-ct------ga-----attctg
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        8874 40 +     19930 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttacac-a-c-ct------ga-----attctg
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       5303 40 -     19997 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttacac-a-c-ct------ga-----attctg
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            45424 40 -     60166 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttacac-a-c-ct------ga-----attctg
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        12896 40 -     27529 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttacac-a-c-ct------ga-----attctg
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     12837 40 -     18194 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttacac-a-c-ct------ga-----attctg
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           6570 40 -     21137 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttacac-a-c-ct------ga-----attctg
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    5273 40 -     10723 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttacac-a-c-ct------ga-----attctg
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         4425 40 +      9834 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttacac-a-c-ct------ga-----attctg
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        22741 40 +     32220 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttacac-a-c-ct------ga-----attctg
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5936840 40 +   6242583 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttacac-a-c-ct------ga-----attctg
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        6089 40 +     20839 tgg----tgaa----------t-----a----aatt---------c----tgg-tacatttacac-a-c-ct------ga-----attctg
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2154105 39 +   4065304 tag----tgaa----------t-----g----aatt---------g----tgg-ttcattctta--a-a-cc------ga-----attcta
i Tupaia_chinensis.KB320699.1                            I 1 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     7761 40 -     10553 tag----tgaa----------t-----a----aatt---------g----tgg-tacattctta-ta-a-cc------aa-----attcta
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4849300 33 -   5085361 tga----tgaa----------t-----a----aact---------at-gat----acattcata--c-aatt------g------------
i Ursus_maritimus.KK499267.1                             C 0 I 14
s Varecia_rubra.k141_590885                                   9860 40 +     50397 tgg----tgaa----------t-----a----aatt---------g----tga-tacattcatat-a-a-tt------ga-----attcta
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              9915 40 +     24756 tgg----tgaa----------t-----a----aatt---------g----tga-tacattcatat-a-a-tt------ga-----attcta
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5370766 33 -   5488506 tgg----tgaa----------t-----a----aatt---------gtgg-t----acattcaca--c-aact------g------------
i Vicugna_pacos.KN270157.1                               C 0 I 4
s Zalophus_californianus.ZalCal_flattened_line_17732          4026 33 +     86975 tgg----tgaa----------t-----a----aact---------gt-gat----acattcata--c-aatt------g------------
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 14
e Echinops_telfairi.JH980293.1                            48778276  0 + 111700974 C
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Saguinus_geoffroyi.k141_1413670                            12092  0 -     13588 C
e Chiropotes_albinasus.k141_2813271                           8451 841 +     11226 I
e Cebus_unicolor.k141_219506                                 14903  0 -     16904 I
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Mus_pahari.LT608297.1                                   31352818  0 -  89631738 C
e Mus_spretus.CM004101.1                                  90750234  0 - 130317789 C
e Mus_musculus.chr8                                       87648156  0 - 129401213 C
e Mus_caroli.LT608237.1                                   84359172  0 - 120012414 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Xerus_inauris.XerIna_scaffold_48378                        22715  0 -     24430 C
e Vulpes_lagopus.VulLag_flattened_line_30954                  9730  0 -     43706 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   52652  8 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Spermophilus_dauricus.KZ294078.1                         1951468 299 -   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11304  0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152480  8 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rattus_norvegicus.chr16                                 53568239  0 +  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Psammomys_obesus.NESX01036370.1                             8401  0 -     21651 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18191985  0 -  18517816 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Pan_paniscus.KQ411613.1                                    41837 195 +     80009 I
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       461284  0 -    559221 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7577 1418 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    77382  0 +    102263 C
e Ondatra_zibethicus.OndZib_scaffold_46174                   22267 24 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Nyctereutes_procyonoides.CAJHUB010000658.1               9148320  0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11258701  7 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    18126  0 -    145209 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12180532  2 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 30759  0 +    140813 C
e Marmota_marmota.CZRN01000018.1                          33100580 298 -  40650429 I
e Lycaon_pictus.CM007581.1                                17954062  0 -  59628241 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Ictidomys_tridecemlineatus.JH393364.1                    7518272 302 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Ellobius_talpinus.LOJH01109367.1                            3704  7 -      6299 I
e Ellobius_lutescens.LOEQ01008920.1                          17650  7 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089466 1162 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            62283 174 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    835315  0 +   1526836 C
e Cricetulus_griseus.LT883664.1                           11665468  2 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 48141  0 +     63868 C
e Condylura_cristata.JH655891.1                           17547413  8 -  53390261 I
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    136243  0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18499334  0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17957822  0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9033557  0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    184171  0 -    185531 C
e CanFam4.chr16                                           17798114  0 -  60362399 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      10117 439 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     72139 576 -     89534 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     68454  0 +     87051 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       4597 52 +     62944 C-GAAGC-AA-T--GAAA--A----GG-A------A------------ACAACTAC-TG-AT-A-CGATCAAGAAC---GAATGA-ATAT
s Acinonyx_jubatus.LLWD01001279.1                           826223 41 -   1699592 ----------------at--agaaagg-a------a------------caaactac-ta-gt-a-c-----acaac-atggatg--atat
i Acinonyx_jubatus.LLWD01001279.1                        I 14 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9509481 43 -  29979442 ----------------at--a----gg-a------g------------caaactac-ta-at-a-taatcaacaac-atggatg-aatat
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 14 C 0
s Ailurus_fulgens.LNAC01001112.1                             78266 43 -    347723 ----------------gt--a----gg-a------g------------caaactac-ta-at-a-aaatcaacaac-atggatg-aattt
i Ailurus_fulgens.LNAC01001112.1                         I 14 C 0
s Allenopithecus_nigroviridis.k141_3361533                   12512 52 -     52922 c-taagc-aa-t--gaca--a----ag-a------a------------acaatcac-cg-at-g-caaacaacaac---gaatga-atag
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         12455 52 -     28001 c-taagc-aa-t--gaca--a----gg-a------a------------acaatcac-cg-at-g-caaacaacaac---aaatga-atat
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          2901 52 -     18505 c-taagc-aa-t--gaca--g----gg-a------a------------acaatcac-cg-at-g-caaacaacaac---aaatga-atat
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           3750 52 -     12518 c-taagc-aa-t--gaca--g----gg-a------a------------acaatcac-cg-at-g-caaacaacaac---aaatga-atat
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                              1311 52 -     27731 c-taagc-cg-t--gaag--a----gg-t------a------------gcaatggc-tg-at-a-caaccaacaat---gaagga-atat
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                1436 52 +      3134 c-taagc-cg-t--gaag--a----gg-t------a------------gcaatggc-tg-at-a-caaccaacaat---gaagga-atat
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               1571 52 -     45847 c-taagc-cg-t--gaag--a----gg-t------a------------gcaatggc-tg-at-a-caaccaacaat---gaagga-atat
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                22777 52 +     25266 c-taagc-cg-t--gaag--a----gg-t------a------------gcaatggg-tg-at-a-caaccaacaat---gaagga-atat
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           1961 52 +      2906 c-taagc-cg-t--gaag--a----gg-t------a------------gcaatggc-tg-at-a-caaccaacaat---gaaggc-atat
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            16074 52 -     18578 c-taagc-cg-t--gaag--a----gg-t------a------------gcaatggc-tg-at-a-caaccaacaat---gaagga-atat
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              1461 52 +     47717 c-taagc-tg-t--gaag--a----gg-t------a------------gcaatggc-tg-at-a-caaccaacaat---gaagga-atat
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             1591 52 -      3544 c-taagc-cg-t--ggag--a----gg-t------a------------gcaatggc-tg-at-a-caaccaacaat---gaagga-atat
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             12811 52 +     50774 c-taagc-cg-t--gaag--a----gg-t------a------------gcaatggc-tg-at-a-caaccaacaat---gaagga-atat
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      183989 24 +    412891 c-tcagc-a--t--aaaa--g----gg-a------a------------tgatcta-----------------------------------
i Anoura_caudifer.AnoCau_scaffold_1412                   I 6 I 29
s Aotus_azarae.k141_3104676                                  13432 52 -     33861 c-taagc-cg-t--gaaa--a----ga-a------a------------acaacggc-tg-at-a-caaccaacaat---gaagga-aaat
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            13452 52 -     34016 c-taagc-cg-t--gaaa--a----gg-a------a------------acaacggc-tg-at-a-caaccaacaat---gaagga-aaat
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4295849 52 -   5030052 C-TAAGC-CG-T--GAAA--A----GG-A------A------------ACAACGGC-TG-AT-A-CAACCAACAAT---GAAGGA-AAAT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             13454 52 -     34685 c-taagc-cg-t--gaaa--a----gg-a------a------------acaatggc-tg-at-a-caaccaacaat---gaagga-aaat
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               26575 52 -     47192 c-taagc-cg-t--gaaa--a----ga-a------a------------acaacggc-tg-at-a-caaccaacaat---gaagga-aaat
i Aotus_vociferans.k141_344750                           C 0 C 0
s Arctocebus_calabarensis.k141_2318572                        9654 55 +     14667 c-tcagc-aa-t--aaaa--a----agta------a------------caaactat-ta-at-a-caatcaacatc-atggatga-atgt
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3401 24 +     43469 g-tcagc-g--t--aaaa--g----gg-a------g------------tgatcta-----------------------------------
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 6 I 29
s Avahi_laniger.k141_765380                                  52175 54 -     92717 c-taagc-aa-t--aaaa--t----gg-a------a------------caaactgc-tg-at-a-caatcaacaac-gtggataa-atgt
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              52804 54 +     85213 c-taagc-aa-t--aaaa--t----gg-a------a------------caaactgc-tg-at-a-caatcaacaac-gtggatga-atgt
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             3193 52 -     10423 c-taagc-cg-t--gaaa--a----gg-a------a------------acaacggc-cg-at-a-cagccaacaat---gaggga-aaat
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             22694 52 +     31915 c-taagc-ca-t--gaaa--a----gg-a------a------------acaacggc-tg-at-a-caaccaacaat---gaagga-aaat
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            3163 52 +      5267 g-ttagc-cg-t--gaaa--a----gg-a------a------------acaacggc-cg-at-a-cagccaacaat---gaagga-aaat
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23588377 52 - 189096842 C-TAAGC-CG-T--GAAA--A----GG-A------A------------ACAACGGC-CG-AT-A-CAGCCAACAAT---GAAGGA-AAAT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              9907 52 -     12001 c-taagc-ca-t--gaaa--a----gg-a------a------------acaacggc-cg-at-a-cagccaacaat---gaagga-aaat
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10001316 51 -  17673402 c-tcagca-a-t--aaaa--a----ga-a------a------------caaactac-tg-at-a-caatcaac----atggatga-atat
i Camelus_bactrianus.KN276810.1                          I 4 C 0
s Camelus_dromedarius.KN272107.1                           2333774 51 -   7040546 c-tcagca-a-t--aaaa--a----ga-a------a------------caaactac-tg-at-a-caatcaac----atggatga-atat
i Camelus_dromedarius.KN272107.1                         I 4 C 0
s Camelus_ferus.KB017975.1                                  402056 51 -   1652518 c-tcagca-a-t--aaaa--a----ga-a------a------------caaactac-tg-at-a-caatcaac----atggatga-atat
i Camelus_ferus.KB017975.1                               I 4 C 0
s CanFam4.chr16                                           17798114 31 -  60362399 -----------------------------------------------------tac-ta-at-a-caatcaacaac-atggatg-aatat
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184171 31 -    185531 -----------------------------------------------------tac-ta-at-a-caatcaacaac-atggatg-aatat
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9033557 31 -   9314153 -----------------------------------------------------tac-ta-at-a-caatcaacaac-atggatg-aatat
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17957822 31 -  59632846 -----------------------------------------------------tac-ta-at-a-caatcaacaac-atggatg-aatat
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18499334 31 +  63665305 -----------------------------------------------------tac-ta-at-a-caatcaacaac-atggatg-aatat
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           154487 32 -    496798 ----------------------------A------A------------AGAACTGC-TG-AT-T-CTATCAATAAC----ATTG----AT
i Carlito_syrichta.NW_007259797.1                        I 12 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                3763 24 -     11696 c-tcagc-a--t--aaaa--g----gg-a------a------------tgatcta-----------------------------------
i Carollia_perspicillata.CarPer_scaffold_92756           I 6 I 29
s Catagonus_wagneri.CatWag_scaffold_2839                     91909 54 +    217609 c-tcagc--agt--gaaa--g----ga-a------a------------caaactac-tg-at-a-cagtcgatagc-atggatgc-atat
i Catagonus_wagneri.CatWag_scaffold_2839                 I 3 C 0
s Cebuella_niveiventris.k141_1251222                          7817 52 -     11392 c-taagc-cg-t--gaaa--a----gg-a------a------------acaacggc-tg-gt-a-cagccaacaat---gaggga-aaat
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               3915 52 -      7577 c-taagc-cg-t--gaaa--a----gg-a------a------------acaacggc-tg-gt-a-cagccaacaat---gaggga-aaat
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         3998 32 +     31688 ----------------------------a------a------------agaactgc-tg-at-t-ctatcaataac----attg----at
i Cephalopachus_bancanus.k141_1423433                    I 12 C 0
s Ceratotherium_simum.JH767749.1                          12230350 54 +  27778364 c-tcagc--aat--aaaa--a----gg-a------a------------tgaactac-tg-at-a-caatcaataac-acagatga-atat
i Ceratotherium_simum.JH767749.1                         I 1 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1377 54 -     25243 c-tcagc--aat--aaaa--a----gg-a------a------------tgaactac-tg-at-a-caatcaataac-acagatga-atat
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 1 C 0
s Cercocebus_atys.KQ010504.1                               4473467 52 +   4669795 C-TAAGC-AA-T--GACA--A----GG-C------A------------AGAATCAC-TG-AT-G-CAAACAACAAC---GAATga-atat
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        12016 52 -     19203 c-taagc-aa-t--gaca--a----gg-c------a------------acaatcac-tg-at-g-caaacaacaac---gaatga-atat
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           6438 52 +      8260 c-taagc-aa-t--gaca--a----gg-c------a------------acaatcac-tg-at-g-caaacaacaac---gaatga-atat
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           6664 52 +     27781 c-aaagc-aa-t--gaca--a----gg-c------a------------acaatcac-tg-at-g-caaacaacaac---gaatga-atat
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         6822 52 -     20310 c-taagc-aa-t--gaca--a----gg-a------a------------acaatcac-cg-at-g-caaacaacaat---gaatga-atat
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           9801 52 +     29689 c-taagc-aa-t--gaca--a----gg-a------a------------acaatcac-ca-at-g-caaacaacaac---gaatga-atat
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            4232 52 +      9989 c-taagc-aa-t--gaca--a----gg-a------a------------acaatcac-cg-at-g-caaacaacaat---gaatga-atat
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          12480 52 -     27936 c-taagc-aa-t--gaca--a----gg-a------a------------acaatcac-cg-at-g-caaacaacgac---gaatga-atat
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            1357 52 -     17152 c-taagc-aa-t--gaca--a----gg-a------a------------acaatcac-cg-at-g-caaacaacgac---gaatga-atat
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38814884 52 +  39242232 c-taagc-aa-t--gaca--a----gg-a------a------------acaatcac-cg-at-g-caaacaacaac---gaatga-atat
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21220586 52 -  21565898 c-taagc-aa-t--gaca--a----gg-a------a------------acaatcac-cg-at-g-caaacaacgac---gaatga-atat
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       37704 52 -     53127 c-taagc-aa-t--gaca--a----gg-a------a------------acaatcac-cg-at-g-caaacaacgac---gaatga-atat
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        4964 52 +      7159 c-taagc-aa-t--gaca--a----gg-a------a------------acaatcac-cg-at-g-caaacaacaac---gaatga-atat
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       12507 52 -     27947 c-taagc-aa-g--gaca--a----gg-a------a------------acaatcac-cg-at-g-caaacaacgat---gaatga-atat
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         12480 52 +     17596 c-taagc-aa-t--gaca--a----gg-a------a------------acaatcac-cg-at-g-caaacaacgac---gaatga-atat
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          1703 52 +     26000 c-taagc-aa-t--gaca--a----gg-a------a------------acaatcac-cg-at-g-caaacaacaac---gaatga-atat
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_713168              62 54 -      2554 c-ttaac-aa-t--aaaa--a----gg-a------a------------ggaacta-cta-at-a-cacttaacaaa-atgggtga-atat
i Chaetophractus_vellerosus.ChaVel_scaffold_713168       C 0 C 0
s Cheirogaleus_major.k141_333249                             19584 54 -     52598 c-tcagt-aa-t--aaaa--a----gg-a------a------------caaactac-tg-at-a-caatcaacaac-atggatga-atgt
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           14935 54 +     57038 c-tcagt-aa-t--aaaa--a----gg-a------a------------caaactac-tg-at-a-caatcaacaac-gtggatga-atgt
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chlorocebus_aethiops.ctg25                              18426453 52 -  18827391 c-taagc-ag-t--gaca--a----gg-a------a------------acaatcac-cg-at-g-caaacaacaac---gaacga-atac
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       12890 52 -     50209 c-taagc-aa-t--gaca--a----gg-a------a------------acaatcac-cg-at-g-caaacaacaac---gaacga-atat
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135419890 52 + 135778131 C-TAAGC-AA-T--GACA--A----GG-A------A------------ACAATCAC-CG-AT-G-CAAACAACAAC---GAACGA-ATAT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 16774 53 +     19366 t-ttagc-aa-t--acaa--a----tg-a------a------------tgaacta--tg-ac-a-caattagcaaa-gtggatga-acat
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            171873 53 +    839153 t-ttagc-aa-t--acaa--a----tg-a------a------------tgaacta--tg-ac-a-caattagcaat-gtggatga-acat
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_1271534               406 40 -      1204 --------------a-aa--a----tg-a------g------------caaactgc-tt-ga-a-caatcaacaac-atttctga-----
i Chrysochloris_asiatica.ChrAsi_scaffold_1271534         I 135 N 0
s Colobus_angolensis.KN981557.1                            1908405 52 +   2368649 C-TAAGC-AA-T--GACA--A----GG-A------A------------ACAATCAC-TG-AT-G-CAAACAACAGC---GAATGA-ATAG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199948081 52 + 200372422 c-taagc-aa-t--gaca--a----gg-a------a------------acaatcac-tg-at-g-caaacaacagc---gaatga-atag
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              34943 52 +     84244 c-taagc-aa-t--gaca--a----gg-a------a------------acaatcac-tg-at-g-caaacaacagc---gaatga-atag
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039            449 38 +     23735 ----------------------------a------a------------taaaatat-t--acca-tttgcaacaac-acagatag-acat
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      I 88 I 48
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27409 32 -     87169 ---------------------------------------------------actac-ta-at-a-cagtcaacaac-atggatg--acaa
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 24 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               1700  9 -     19598 TATTAGA-AA--------------------------------------------------------------------------------
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12535797 54 -  12879189 c-tcagc-aa-t--aaaa--a----gg-a------a------------caaactgc-tg-at-a-caatcaacaac-atggatga-atgt
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8628795 24 +  20541912 c-tcagc-a--t--aaaa--g----ag-a------a------------caatcta-----------------------------------
i Desmodus_rotundus.KZ672289.1                           I 6 I 13
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672200 54 +   1390856 c-tcagc--aat--aaaa--a----gg-a------a------------tgaactac-tg-at-a-caatcaacaac-acagatga-acat
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 1 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    4953 54 +    198055 c-tcagc--aat--aaaa--a----gg-a------a------------tgaactac-tg-at-a-caatcaataac-acagatga-atat
i Diceros_bicornis.DicBicMic_scaffold_5955               I 1 C 0
s Echinops_telfairi.JH980293.1                            48778276 42 + 111700974 -----------g--a-aa--a----at-a------a------------caagttAC-AG-AC-A-CAATCAATAGA--A--CCGA-TTGT
i Echinops_telfairi.JH980293.1                           C 0 I 232
s Eidolon_helvum.KE759718.1                                   9440 45 +     11740 -----------t--aaaaa-c----ag-a------a------------taaagtac-t--at-a-cagtcaacaa--atggatga-atat
i Eidolon_helvum.KE759718.1                              I 8 C 0
s Enhydra_lutris.KZ291758.1                               16328234 43 -  41312741 ----------------ac--a----gg-a------g------------caaactac-ta-at-a-caatcaagaac-atggata-aatat
i Enhydra_lutris.KZ291758.1                              I 14 C 0
s Equus_asinus.JREZ01000139.1                              1282262 54 +   4378816 c-tcagc--aaa--ataa--a----gg-a------a------------tgaattac-tg-at-a-caatcaacaac-atggatga-atat
i Equus_asinus.JREZ01000139.1                            I 1 C 0
s Equus_caballus.CM000403.2                               18530083 54 -  39960074 c-tcagc--aaa--ataa--a----gg-a------a------------tgaattac-tg-at-a-caatcaacaac-atggatga-atat
i Equus_caballus.CM000403.2                              I 1 C 0
s Equus_przewalskii.KK951119.1                               32098 54 +    498745 c-tcagc--aaa--ataa--a----gg-a------a------------tgaattac-tg-at-a-caatcaacaac-atggatga-atat
i Equus_przewalskii.KK951119.1                           I 1 C 0
s Erythrocebus_patas.Contig38                             21203061 52 -  21539334 c-taagc-aa-t--gaca--a----gg-a------a------------acaatcac-cg-at-g-caaacaacaac---gaacga-atat
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              12279 53 -     14127 c-tcagc-aa-t--aaaa--a----gg-a------a------------caagctac-tg-at-a-taatcaacaac-gt-gatga-atgt
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                4977 53 -     16928 c-tcagc-aa-t--aaaa--a----gg-a------a------------caagctac-tg-at-a-taatcaacaac-gt-gatga-atgt
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              14031 28 -     25546 ------------------------------------------------------ac-tg-at-a-taatcaacaac-gt-gat-a-atgt
i Eulemur_coronatus.k141_885031                          I 17 C 0
s Eulemur_flavifrons.k141_1184614                            11204 53 +     26330 c-tcagc-aa-t--aaaa--a----gg-a------a------------caagctac-tg-at-a-taatcaacaac-gt-gatga-atgt
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 12443 54 +     23973 c-tcagc-aa-t--aaaa--a----gg-a------a------------caagctac-tg-ataa-taatcaacaac-gt-gatga-atgt
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                11204 53 +     75513 c-tcagc-aa-t--aaaa--a----gg-a------a------------caagctac-tg-at-a-taatcaacaac-gt-gatga-atgt
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  9146 53 +     97555 c-tcagc-aa-t--aaaa--a----gg-a------a------------caagctac-tg-at-a-taatcaacaac-gt-gatga-atgt
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            12099 29 +     26496 ------------------------------------------------------ac-tg-at-a-taatcaacaac-gt-gatga-atgt
i Eulemur_rubriventer.k141_571033                        I 17 C 0
s Eulemur_rufus.k141_1476633                                  2679 53 -     17153 c-tcagc-aa-t--aaaa--a----gg-a------a------------caagctac-tg-at-a-taatcaacaac-at-gatga-atgt
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              12255 53 +    111500 c-tcagc-aa-t--aaaa--a----gg-a------a------------caagctac-tg-at-a-taatcaacaac-gt-gatga-atgt
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20236092 41 + 206538554 ----------------at--agaaagg-a------a------------caaactac-ta-gt-a-c-----acaac-atggatg--atat
i Felis_catus.CM001381.2                                 I 14 C 0
s Felis_catus_fca126.CM031415.1                           20194935 41 + 205367284 ----------------ac--agaaagg-a------a------------caaactac-ta-gt-a-c-----acaac-atggatg--atat
i Felis_catus_fca126.CM031415.1                          I 14 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  8449 41 -     36744 ----------------at--agaaaag-a------a------------caaactac-ta-gt-a-c-----acaac-atggatg--atat
i Felis_nigripes.FelNig_flattened_line_20823             I 14 C 0
s Galago_moholi.ctg2040                                     424619 41 -    453645 -------------------------aggt------a------------caaactat-ta-at-a-caatcaacacc-atggatga-atgt
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             2326 41 +     11339 -------------------------aggt------a------------caaactat-ta-at-a-caatcaacacc-atggatga-atgt
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1959596                            6134 41 +      6795 -------------------------aggt------a------------caaactac-ta-at-a-caatcaacacc-atggatga-atgt
i Galagoides_demidoff.k141_1959596                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_197845               2537 55 -      3123 c-tcagcaaa-a--aaaa--a----gg-a------a------------ctaactac-tg-at-g-caattaacaac-atggatga-atat
i Galeopterus_variegatus.GalVar_scaffold_197845          C 0 C 0
s Gorilla_beringei.k141_3596273                              13849 52 -     32273 c-gaagc-aa-t--gaaa--a----gg-a------a------------acaactac-tg-at-a-cgatcaagaac---gaatga-atat
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186335997 52 + 186649187 c-gaagc-aa-t--gaaa--a----gg-a------a------------acaactac-tg-at-a-cgatcaagaac---gaatga-atat
i Gorilla_gorilla.LT578341.1                             C 0 I 35
s Hapalemur_alaotrensis.k141_170648                           5335 53 -     19426 c-tcacc-aa-t--aaaa--a----gg-a------a------------caagctat-tg-at-a-taatcaacaac-tt-aatga-gtgt
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             10484 53 -     15286 c-tcacc-aa-t--aaaa--a----gg-a------a------------caagctat-tg-at-a-taatcaacaac-tt-aatga-gtgt
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             12123 53 +     18253 c-tcacc-aa-t--aaaa--a----gg-a------a------------caagctat-tg-at-a-taatcaacaac-tt-aatga-gtgt
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         12224 53 -     41752 c-tcacc-aa-t--aaaa--a----gg-a------a------------caagctat-tg-at-a-taatcaacaac-tt-aatga-gtgt
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         12062 53 -     16460 c-tcacc-aa-t--aaaa--a----gg-a------a------------caagctat-tg-at-a-taatcaacaac-tt-aatga-gtgt
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               241246 32 +    327341 ---------------------------------------------------actac-ta-at-a-ccgtcaacaac-atggatg--atag
i Helogale_parvula.HelPar_flattened_line_2585            I 21 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_344035                 772 72 -      1135 c-ttagc-aa-a--aaaa--a----aa-aagaaagaaagaaaagaaaagaaactac-tg-at-a-taactaacaac-atggctga-atac
i Heterohyrax_brucei.HetBruBak_scaffold_344035           n 63 I 32
s Hipposideros_armiger.JXIK01000431.1                       110700 56 +   1711038 t-tcagt-aa-ttaaacaa-a----ag-a------a------------caaagtac-t--at-g-taatcaacaa-catggatga-atat
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 17
s Hipposideros_galeritus.HipGal_scaffold_29171               42130 56 +     43066 t-tcagc-aa-ttaaaaaa-a----ag-a------a------------caaagtac-t--at-a-tagtcaacaa-catggatga-atac
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 I 16
s Hoolock_leuconedys.ctg274                                    432661 53 +    630532 t-gaagc-aa-t--gaaa--a----gg-a------a------------acaactac-tg-at-aacgatcaagagc---gaatga-atat
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  43385 32 +     55795 ---------------------------------------------------actac-ta-at-a-cagtcaacaac-atggaac--atac
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 23 C 0
s Hylobates_agilis.k141_232023                                 427 53 -     12752 t-gaagc-aa-t--gaaa--a----gg-a------a------------acaactac-tg-at-aacgatcaagaac---gaatga-atat
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                                471 53 +     14092 t-gaagc-aa-t--gaaa--a----gg-a------a------------acaactac-tg-at-aacgatcaagaac---gaatga-atat
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189541254 53 - 191637585 t-gaagc-aa-t--gaaa--a----gg-a------a------------acaactac-tg-at-aacgatcaagaac---gaatga-atat
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3334148 53 -  11177569 t-gaagc-aa-t--gaaa--a----gg-a------a------------acaactac-tg-at-aacgatcaagaac---gaatga-atat
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_3655594                                   21027 54 +     31101 c-tcagc-aa-t--aaaa--t----gg-a------a------------caaactgc-tg-at-a-caatcaacaac-gtggatga-atgt
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15522567 53 -  30322482 t-tcagc-aa-t--aaaa--a----gg-a------a------------caagctac-tg-at-g-taatcaacaac-tt-gatga-atgt
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        5536 22 +     64341 c-caagc-ca-t--gaaa--a----gg-a------a------------acaa--------------------------------------
i Leontocebus_fuscicollis.k141_1820339                   C 0 I 11
s Leontocebus_illigeri.k141_3350179                           2597 22 +      4941 c-caagc-ca-t--gaaa--a----gg-a------a------------acaa--------------------------------------
i Leontocebus_illigeri.k141_3350179                      C 0 I 11
s Leontocebus_nigricollis.k141_4610752                        5465 22 +     35603 c-caagc-ca-t--gaaa--a----gg-a------a------------acaa--------------------------------------
i Leontocebus_nigricollis.k141_4610752                   C 0 I 11
s Leontopithecus_chrysomelas.k141_1519602                    26953 48 +     38576 c-taagc-cg-t--gaga--a----gg-a------a------------acaatgtc-tg-at-a-caaccaacagt---ga-----aaat
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         23650 48 +     66356 c-taagc-cg-t--gaga--a----gg-a------a------------acaatgtc-tg-at-a-caaccaacagt---ga-----aaat
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          9474 54 -     23766 c-tcaac-ag-t--aaaa--a----gg-a------a------------caaactac-tg-at-a-caatcaacaac-gtggatga-acat
i Lepilemur_ankaranensis.k141_596936                     C 0 I 20
s Lepilemur_dorsalis.k141_577674                             27540 54 +     45836 c-tcaac-ag-t--aaaa--a----gg-a------a------------caaactac-tg-at-a-caatcaacaac-gtggatga-acat
i Lepilemur_dorsalis.k141_577674                         C 0 I 20
s Lepilemur_ruficaudatus.k141_667017                          2076 54 -      2151 c-tcaac-aa-t--aaaa--a----gg-a------a------------caaactac-tg-at-a-caatcaacaag-gtggatga-acat
i Lepilemur_ruficaudatus.k141_667017                     C 0 N 0
s Lepilemur_septentrionalis.k141_185316                      25476 54 +     54090 c-tcaac-ag-t--aaaa--a----gg-a------a------------caaactac-tg-at-a-caatcaacaac-gtggatga-acat
i Lepilemur_septentrionalis.k141_185316                  C 0 I 20
s Leptonychotes_weddellii.KB714746.1                       3041772 39 +   3914936 ----------------at--a----gg-a------g------------caaactac-ta-at-a-cagtcaacaac-atgga-----tat
i Leptonychotes_weddellii.KB714746.1                     I 14 C 0
s Lepus_americanus.LepAme_scaffold_107385                     4438 54 -     14121 c-ttggc-aa-t--gaaa--t----ga-a------a------------taaattac-ta-aa-a-taatcaactac-atggataa-gtat
i Lepus_americanus.LepAme_scaffold_107385                I 7 C 0
s Lophocebus_aterrimus.ctg367                              1435014 52 +   1826925 g-taagc-aa-t--gaca--a----gg-c------a------------acaatcac-tg-at-g-caaacaacaac---gaatga-atat
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            4080 55 +     11245 c-tcagc-aa-t--aaaa--a----agta------a------------caaactat-ta-at-a-caatctacatc-atggatta-atgt
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1002919 55 +   6120653 c-tcagc-aa-t--aaaa--a----agta------a------------caaactat-ta-at-a-caatctacatc-atggatta-atgt
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4215892 54 -  43346337 c-tcagc-aa-g--aaaa--a----ag-a------a------------caaactac-tg-at-a-ctatcaacaac-atggctga-atgt
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17954062 31 -  59628241 -----------------------------------------------------tac-ta-at-a-caatcaacaac-atggatg-aatat
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               4829 52 +     40492 c-taagc-aa-t--gaca--a----gg-c------a------------acaatcac-tg-at-g-caaacaacaac---aaatga-atat
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59674091 52 +  60120075 c-taagc-aa-t--gaca--a----gg-c------a------------acaatcac-tg-at-g-caaacaacaac---aaatga-atat
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 10585 52 -     26193 c-taagc-aa-t--gaca--a----gg-c------a------------acaatcac-tg-at-g-caaacgacaac---aaatga-atat
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            78389 52 -    114318 c-taagc-aa-t--gaca--a----gg-c------a------------acaatcac-tg-at-g-caaacaacaac---aaatga-atat
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  4088 52 -     23192 c-taagc-aa-t--gaca--a----gg-c------a------------acaatcac-tg-at-g-caaacgacaac---aaatga-atat
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                13549 52 -     29190 c-taagc-aa-t--gaca--a----gg-c------a------------acaatcac-tg-at-g-caaacaacaac---aaatga-atat
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  22116 52 +     37952 c-taagc-aa-t--gaca--a----gg-c------a------------acaatcac-tg-at-g-caaacaacaac---aaatga-atat
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186837204 52 + 187317192 C-TAAGC-AA-T--GACA--A----GG-C------A------------ACAATCAC-TG-at-g-caaacaacaac---aaatga-atat
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25455766 52 -  25927173 C-TAAGC-AA-T--GACA--A----GG-C------A------------ACAATCAC-Tg-at-g-caaacaacaac---aaatga-atat
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  77965 52 +     89720 c-taagc-aa-t--gaca--a----gg-c------a------------acaatcac-tg-at-g-caaacaacaac---aaatga-atat
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 4962 52 +     20474 c-taagc-aa-t--gaca--a----gg-c------a------------acaatcac-tg-at-g-caaacaacaac---aaatga-atat
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   4763 52 -     14993 c-taagc-aa-t--gaca--a----gg-c------a------------acaatcac-tg-at-g-caaacaacaac---aaatga-atat
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  327634 52 -    668171 c-taagc-aa-t--gaca--a----gg-c------a------------acaatcac-tg-at-g-caaacaacaac---aaatga-atat
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 3074 52 -     24072 c-taagc-aa-t--gaca--a----ag-c------a------------acaatcac-tg-at-g-caaacaacaac---aaatga-atat
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               23703 52 -     45290 c-taagc-aa-t--gaca--a----gg-c------a------------acaatcac-tg-at-g-caaacaacaac---aaatga-atat
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 89525 53 +     94391 t-tcggc-ta-t--aaaaa-c----ag-a------a------------caaagtac-t--at-a-cagtcaacaa--atggatga-atat
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23935287 52 -  24302211 c-taagc-aa-t--gaca--a----gg-c------a------------acaatcac-tg-at-g-caaacaacaac---gaatga-atat
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               349419 52 +    752769 c-taagc-aa-t--gaca--a----gg-c------a------------acaatcac-tg-at-g-caaacaacaac---gaatga-atat
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         9270 28 -    207569 -------------------------------------------------------g-t--ac-a-caatcaacaac-atcgatga-atat
i Megaderma_lyra.MegLyr_scaffold_4542                    I 22 I 4272
s Mellivora_capensis.MelCap_flattened_line_69365              8951 43 +     13704 ----------------ac--a----gg-a------a------------caaactac-ta-at-a-caatcaagaac-atggata-aatac
i Mellivora_capensis.MelCap_flattened_line_69365         I 14 C 0
s Mico_argentatus.k141_1239457                                3739 52 -      7380 c-taagc-cg-t--gaaa--a----gg-a------a------------acaacggc-cg-at-a-cagccaacaat---gagaga-aaat
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               2805 52 +     18990 c-taagc-cg-t--gaaa--a----gg-a------a------------acaacggc-cg-at-a-cagccaacaat---gaggga-aaat
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      3744 52 -      7356 c-taagc-cg-t--gaaa--a----gg-a------a------------acaacggc-cg-at-a-cagccaacaat---gaggga-aaat
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18289976 54 -  93316391 c-tcagt-aa-t--aaaa--a----gg-a------a------------caaactac-tg-at-a-caatTAACAAC-GTAAATGA-ATGG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    18126 42 -    145209 -----------G--A-AA--A----AT-A------A------------CAAATTAT-AG-AC-A-CAATCAATAGT--A--CTGA-TTgt
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 232
s Micronycteris_hirsuta.MicHir_scaffold_52381                14309 24 -     19307 c-tcagc-a--t--aaaa--g----gg-a------a------------cgagcta-----------------------------------
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 6 I 29
s Miopithecus_ogouensis.k141_534055                           7010 52 -     28506 c-taagc-aa-t--gaca--a----gg-a------a------------acaatcac-cg-at-g-caaacaacaac---gaatga-atat
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         4640 39 -      8324 ----------------at--a----gg-a------g------------caaactac-ta-at-a-cagtcaacaac-atgga-----tat
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 14 C 0
s Mirza_zaza.k141_952172                                      7548 54 -     37649 c-tcagt-aa-t--aaaa--a----gg-a------a------------caaactac-tg-at-t-aaattaacaat-gtaaatga-atgt
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140225 53 -    366855 c-tcaga-a--t--aaaa--g----gg-a------a------------caatctac-t-gat-a-taaccaata-tcacaaatga-atat
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 6 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   34358 32 +     37127 ---------------------------------------------------actac-ta-at-a-ccatcgacaac-atggatg--atag
i Mungos_mungo.MunMun_flattened_line_23663               I 21 C 0
s Mustela_putorius.JH418006.1                               300128 43 -  14710649 ----------------ac--a----gg-a------g------------caaactac-ta-at-a-caatcaagaac-atggata-aatat
i Mustela_putorius.JH418006.1                            I 14 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187700 54 +    196477 c-ttagc-aa-t--aaaa--a----tg-a------a------------tgaactcc-tg-gt-a-cagttaacaac-atggatga-atat
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nasalis_larvatus.k141_413338                               13006 52 +     21681 c-taagc-aa-t--gaca--a----gg-a------a------------acaatcac-tg-at-g-caaacaacaac---gaatga-atat
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20305898 39 +  31847680 ----------------at--a----gg-a------g------------caaactac-ta-at-a-cagtcaacaac-atgga-----tat
i Neomonachus_schauinslandi.NINY01007730.1               I 14 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9148320 31 -   9404916 -----------------------------------------------------tac-ta-at-a-caatcaacaac-atggatg-catat
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102577840 55 - 196305487 c-tcagc-aa-t--aaaa--a----agta------a------------caaactat-ta-at-a-caatctacatc-acggatta-aggt
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_5327727                             5526 55 +      8486 c-tcagc-aa-t--aaaa--a----agta------a------------caaactat-ta-at-a-caatctacatc-acggatta-aggt
i Nycticebus_coucang.k141_5327727                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105748267 55 + 199412804 c-tcagc-aa-t--aaaa--a----agta------a------------caaactat-ta-at-a-caatctacatc-acagatta-aggt
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1361496 54 +   3988456 c-ttagc-aa-g--gtac--t----ca-a------a------------tgaatgac-tg-at-a-taatcaacaacc-tggataa-atgt
i Ochotona_princeps.JH802162.1                           I 12 C 0
s Odobenus_rosmarus.KB229312.1                              505565 39 -   2017862 ----------------at--a----gg-a------g------------caaactac-ta-at-a-cagtcaacaac-atgga-----tat
i Odobenus_rosmarus.KB229312.1                           I 19 C 0
s Oryctolagus_cuniculus.CM000791.1                        67145283 54 + 174332312 c-ttggc-aa-t--ggaa--t----ga-a------a------------taaagtac-ta-ag-a-taatcaactac-atggataa-atat
i Oryctolagus_cuniculus.CM000791.1                       I 7 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       461284 31 -    559221 -----------------------------------------------------tac-ta-at-a-caatcaacaac-atggatg-aatat
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         2161 41 +      8798 -------------------------aggt------a------------caaactat-ta-at-a-caatcaacacc-atggatga-atgt
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             694325 41 -   1103335 -------------------------AGGT------A------------CAAACTAT-TA-AT-A-CAATCAACACC-ATGgatga-atgt
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  150102 41 +    230217 ----------------at--agaaagg-a------a------------caaactac-ta-gt-a-c-----acaac-atggatg--atat
i Panthera_onca.PanOnc_flattened_line_3271               I 14 C 0
s Panthera_pardus.KV860321.1                                263307 41 +  18783137 ----------------at--agaaagg-a------a------------caaactac-ta-gt-a-c-----acaac-atggatg--atat
i Panthera_pardus.KV860321.1                             I 14 C 0
s Panthera_tigris.KE722367.1                               4719945 41 -   8748460 ----------------at--agaaagg-a------a------------caaactac-ta-gt-a-c-----acaac-atggatg--atat
i Panthera_tigris.KE722367.1                             I 14 C 0
s Pan_troglodytes.KZ622849.1                                 20225  7 +    110857 C-GAGGC-A---------------------------------------------------------------------------------
i Pan_troglodytes.KZ622849.1                             I 901 I 1528
s Papio_anubis.CM001495.2                                183441041 52 + 183742232 C-TAAGC-AA-T--GACA--A----GG-C------A------------ACAATCAC-TG-AT-G-CAAACAACAAC---GAATga-atat
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             4735 52 +     20448 c-taagc-aa-t--gaca--a----gg-c------a------------acaatcac-tg-at-g-caaacaacaac---gaatga-atat
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20561543 52 +  20919399 c-taagc-aa-t--gaca--a----gg-c------a------------acaatcac-tg-at-g-caaacaacaac---gaatga-atat
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   3479 52 +     41871 c-taagc-aa-t--gaca--a----gg-c------a------------acaatcac-tg-at-g-caaacaacaac---gaatga-atat
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     6764 52 +     27711 c-taagc-aa-t--gaca--a----gg-c------a------------acaatcac-tg-at-g-caaacaacaac---gaatga-atat
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  6844 52 +      9205 c-taagc-aa-t--gaca--a----gg-c------a------------acaatcac-tg-at-g-caaacaacaac---gaatga-atat
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11560 46 -     78924 ----------------at--agaaagg-a------a------------caaactac-ta-at-c-cagtcgacaac-atggatg--atac
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 14 C 0
s Perodicticus_ibeanus.k141_855320                            8294 55 +     13100 c-tcagc-aa-t--aaaa--a----agta------a------------caaactat-ta-at-a-caatcaacatc-atggataa-atgt
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             6672 54 +     25941 c-tcagc-aa-t--aaaa--a----agta------a------------caaact-t-ta-at-a-caatcaacatc-atggataa-atgt
i Perodicticus_potto.k141_1092580                        C 0 I 15
s Piliocolobus_badius.k141_1234363                           41512 47 +     62158 c-taagc-aa-t--gaca--a----gg-a------a------------acaatcac-tg-at-g-caaacaacaac---gaatg------
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        36243 47 +     89929 c-taagc-aa-t--gaca--a----gg-a------a------------acaatcac-tg-at-g-caaacaacaac---gaatg------
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            37659 47 +     51399 c-taagc-aa-t--gaca--a----gg-a------a------------acaatcac-tg-at-g-caaacaacaac---gaatg------
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14293897 47 -  14605196 C-TAAGC-AA-T--GACA--A----GG-A------A------------ACAATCAC-TG-AT-G-CAAACAACAAC---GAATG------
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189128977 52 + 189387572 C-Gaagc-aa-t--gaaa--a----gg-a------a------------acaactaC-TA-AT-A-CGATCAAGAAC---GAatga-atat
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9568585 52 +   9816681 c-gaagc-aa-t--gaaa--a----gg-a------a------------acaactac-ta-at-a-cgatcaagaac---gaatga-atat
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               71174 52 -     81375 c-taagc-aa-t--gaca--a----gg-a------a------------acaatcac-tg-at-g-caaacaacaac---gaatga-atat
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              2994 52 +     19060 c-taagc-aa-t--gaca--a----gg-a------a------------acaatcac-tg-at-g-caaacaacaac---gaatga-atat
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 11536 66 -     22811 c-ttagc-aa-a--aaaa--a----ag-a------aaagaaaagaaaagaaactac-tg-at-a-taactaataac-atggctga-atac
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 I 4
s Prolemur_simus.MPIZ01000396.1                            2595245 53 -   4620579 c-tcagc-aa-t--aaaa--a----gg-a------a------------caagctat-TG-AT-A-TAATCAACAAC-TT-GATGA-ATGT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     989229 54 +   2598838 c-tcagc-aa-t--aaaa--t----gg-a------a------------caaactGC-TG-AT-A-CAatcaacaac-gtggatga-atgt
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          27539 54 +     38485 c-tcagc-aa-t--aaaa--t----gg-a------a------------caaactgc-tg-at-a-caatcaacaac-gtggatga-atgt
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             3699 54 +      4256 c-tcagc-aa-t--aaaa--t----gg-a------a------------caaactgc-tg-at-a-caatcaacaac-gtggatga-atgt
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          25052 54 +     35766 c-tcagc-aa-t--aaaa--t----gg-a------a------------caaactgc-tg-at-a-caatcaacaac-gtggatga-atgt
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           3235 53 -     24134 c-tc-gc-aa-t--aaaa--t----gg-a------a------------caaactgc-tg-at-a-caatcaacaac-gtggatga-atgt
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        27056 54 -     67325 c-tcagc-aa-t--aaaa--t----gg-a------a------------caaactgc-tg-at-a-caatcaacaac-gtggatga-atgt
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           3292 54 -      6182 c-tcagc-aa-t--aaaa--t----gg-a------a------------caaactgc-tg-at-a-caatcaacaac-gtggatga-atgt
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            13605 53 -     21811 c-tcagc-c--t--aaaa--g----gg-a------a------------tgatctac-t-aat-a-cagccaaca-acacaaatga-atat
i Pteronotus_parnellii.KE909381.1                        I 6 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39150 43 +     42204 ----------------ac--a----gg-a------g------------caaactac-ta-at-a-caatcaagaac-atggata-aatat
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 14 C 0
s Pteropus_alecto.KB030862.1                              22975695 53 +  28871421 t-tcagc-aa-t--gaaaa-c----ag-a------a------------caaagtac-t--at-a-cggtcaacaa--atggatgg-atat
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1358781 53 +   4952924 t-tcagc-aa-t--gaaaa-c----ag-a------a------------caaagtac-t--at-a-cggtcaacaa--atggatgg-atat
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20273221 41 -  38429054 ----------------at--agaaagg-a------a------------caaactac-ta-gt-a-c-----acaac-atggatg--atat
i Puma_concolor.QAVW01001104.1                           I 14 C 0
s Pygathrix_cinerea.k141_1153803                             13005 52 -     91421 c-taagc-ag-t--gaca--a----gg-a------a------------acaatcac-tg-at-g-caaacaacaat---gaatga-atat
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7607131 52 +   7812017 c-taagc-ag-t--gaca--a----gg-a------a------------acaatcac-tg-at-g-caaacaacaat---gaatga-atat
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             12979 52 -     72585 c-taagc-ag-t--gaca--a----gg-a------a------------acaatcac-tg-at-g-caaacaacaat---gaatga-atat
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             4686 52 -     11128 c-taagc-aa-t--gaca--a----gg-a------a------------acaatcac-tg-at-g-caaacaacaac---gaatga-atat
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91234042 52 - 195417433 C-TAAGC-AA-T--GACA--A----GG-A------A------------ACAATCAC-TG-AT-G-CAAACAACAAC---GAatga-atat
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7669691 52 +   7961872 c-taagc-aa-t--gaca--a----gg-a------a------------acaatcac-tg-at-g-caaacaacaac---gaatga-atat
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                86706 53 -     96226 t-tcagc-aa-t--aaaaa-c----ag-a------a------------taaagtac-t--at-a-cagtcaacaa--atggatga-atat
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               5850 22 -      8359 c-caagc-cg-t--gaaa--a----gg-a------a------------acaa--------------------------------------
i Saguinus_bicolor.k141_2619299                          C 0 I 11
s Saguinus_imperator.k141_717981                              5793 22 -      6207 c-caagc-ca-t--gaaa--a----gg-a------a------------acaa--------------------------------------
i Saguinus_imperator.k141_717981                         C 0 I 11
s Saguinus_inustus.k141_699149                               11520 22 +     13640 c-taagc-ca-t--gaaa--a----gg-a------a------------acaa--------------------------------------
i Saguinus_inustus.k141_699149                           C 0 I 11
s Saguinus_labiatus.k141_285685                               6382 22 +      8564 c-caagc-ca-t--gaaa--a----gg-a------a------------acaa--------------------------------------
i Saguinus_labiatus.k141_285685                          C 0 I 11
s Saguinus_midas.LG03                                    209466664 22 + 209938924 c-caagc-cg-t--gaaa--a----gg-a------a------------acaa--------------------------------------
i Saguinus_midas.LG03                                    C 0 I 11
s Saguinus_mystax.k141_374627                                 5870 22 -      9399 c-caagc-ca-t--gaaa--a----gg-a------a------------acaa--------------------------------------
i Saguinus_mystax.k141_374627                            C 0 I 11
s Saimiri_boliviensis.NW_024100920.1                     119949222 44 - 121099817 -----------T--GAAA--A----AG-A------A------------ACAACGGC-TG-AT-A-CAACCAACAAT---GAAGGA-ATAT
i Saimiri_boliviensis.NW_024100920.1                     I 6 C 0
s Saimiri_cassiquiarensis.k141_2188234                       21670 52 +     46362 c-taagc-tg-t--gaaa--a----gg-a------a------------acaacggc-tg-at-a-caaccaacaat---gaagga-atat
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               21765 52 +     45824 c-taagc-tg-t--gaaa--a----gg-a------a------------acaacggc-tg-at-a-caaccaacaat---gaagga-atat
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             38393 52 -     64574 c-taagc-tg-t--gaaa--a----gg-a------a------------acaacggc-tg-at-a-caaccaacaat---gaagga-atat
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               1399 52 -     23631 c-taagc-tg-t--gaaa--a----gg-a------a------------acaacggc-tg-at-a-caaccaacaat---gaagga-atat
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 21658 52 -     61129 c-taagc-tg-t--gaaa--a----gg-a------a------------acaacggc-tg-at-a-caaccaacaat---gaagga-atat
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          17511 52 -     19888 c-taagc-aa-t--gaca--a----gg-a------a------------acaatcac-tg-at-g-taaacaacaac---gaatga-atat
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      24714 52 +     39453 c-taagc-aa-t--gaca--a----gg-a------a------------acaatcac-tg-at-g-taaacaacaac---gaatga-atat
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            5240 52 +     27826 c-taagc-aa-t--gaca--a----gg-a------a------------acaatcac-tg-at-g-taaacaacaac---gaatga-atat
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             4760 52 -     19483 c-taagc-aa-t--gaca--a----gg-a------a------------acaatcac-tg-at-g-taaacaacaac---gaatga-atat
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      4822 52 +      7198 c-taagc-aa-t--gaca--a----gg-a------a------------acaatcac-tg-at-g-taaacaacaac---gaatga-atat
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         13082 52 +     15514 c-taagc-aa-t--gaca--a----gg-a------a------------acaatcac-tg-at-g-taaacaacaac---gaatga-atat
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               2677 51 +   1910179 t-ttagc-aa-t--aaac--a----gg-a------a------------caaa---c-ag-at-a-caatcaacaac-atcgttga-atat
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             29658 43 +     97271 ----------------at--a----ga-a------g------------ctaactac-tg-at-a-caataaacaac-atgaatg-aatat
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 14 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              17247 32 -    196729 ---------------------------------------------------actac-ta-at-a-cagtcaacaac-acggatg--atag
i Suricata_suricatta.SurSur_flattened_line_6629          I 21 C 0
s Sorex_araneus.JH798187.1                                13649737  9 -  18376816 TATTTGC-AA--------------------------------------------------------------------------------
i Sorex_araneus.JH798187.1                               C 0 C 0
s Sus_scrofa.JH118708.1                                      34422 54 -     47482 c-tcagc--aat--gaaa--g----ga-a------a------------caaaacaa-tg-at-a-cagaaaatagc-atgaatgc-atat
i Sus_scrofa.JH118708.1                                  I 1 C 0
s Symphalangus_syndactylus.tarseq_199                      1091296 53 -   1523678 t-gaagc-aa-t--gaaa--a----gg-a------a------------acaactac-tg-at-aacgatcaagaac---gaatga-atat
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 9546 27 +     41958 c-tcggc-a-at--agaa--g----gg-a------a------------ctatctac-t--------------------------------
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 2
s Tamandua_tetradactyla.TamTet_scaffold_1782                 71052 54 +    116680 c-ttagc-aa-t--aaaa--a----tg-a------a------------tgaactcc-tg-gt-a-cagttaacaac-atggatga-atat
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      117673 54 -    156842 c-tcagc--aat--aaaa--a----gg-a------a------------taaactac-cg-at-a-caatcaacaac-acagataa-acag
i Tapirus_indicus.TapInd_scaffold_9301                   I 1 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    386126 54 +    539355 c-tcagc--aat--aaaa--a----gg-a------a------------taaactac-cg-at-a-caatcaacaac-acagatga-acag
i Tapirus_terrestris.TapTer_scaffold_755                 I 1 C 0
s Tarsius_lariang.k141_2201908                               24609 32 +     70052 ----------------------------a------a------------agaactgc-tg-at-t-ctatcaataac----atgg----gt
i Tarsius_lariang.k141_2201908                           I 12 C 0
s Tarsius_wallacei.k141_2029956                               3949 32 +      4644 ----------------------------a------a------------agaactgc-tg-at-t-ctatcaataac----atgg----at
i Tarsius_wallacei.k141_2029956                          I 12 C 0
s Theropithecus_gelada.CM009954.1                        186426407 52 + 186847797 C-TAAGC-AA-T--GACA--A----GG-C------A------------ACAATCAC-TG-AT-G-CAAACAACAAC---GAATga-atat
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   3617 54 +      8208 c-ttagc-aa-t--gaaa--g----gg-a------a------------gaaacta-ctg-at-a-cagttaacaaa-atggatga-atgt
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     79850 24 +    610378 c-tcagc-a--t--gaaa--g----gg-a------a------------tgatctg-----------------------------------
i Tonatia_saurophila.TonSau_scaffold_294                 I 6 I 29
s Trachypithecus_auratus.k141_722599                          8813 52 -     20410 c-taagc-aa-t--gaca--a----gg-a------a------------acaatcac-tg-at-g-taaacaacaac---gaatga-atat
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    13007 52 +     15221 c-taagc-aa-t--gaca--a----gg-a------a------------acaatcac-tg-at-g-taaacaacaac---gaatga-atat
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        8914 52 +     19930 c-taagc-aa-t--gaca--a----gg-a------a------------acaatcac-tg-at-g-taaacaacaac---gaatga-atat
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       5343 52 -     19997 c-taagc-aa-t--gaca--a----gg-a------a------------acaatcac-tg-at-g-taaacaacaac---gaatga-atat
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            45464 52 -     60166 c-taagc-aa-t--gaca--a----gg-a------a------------acaatcac-tg-at-g-taaacaacaac---gaatga-atat
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        12936 52 -     27529 c-taagc-aa-t--gaca--a----gg-a------a------------acaatcac-tg-at-g-taaacaacaac---gaatga-atat
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     12877 52 -     18194 c-taagc-aa-t--gaca--a----gg-a------a------------acaatcac-tg-at-g-taaacaacaac---gaatga-atat
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           6610 52 -     21137 c-taagc-aa-t--gaca--a----gg-a------a------------acaatcac-tg-at-g-taaacaacaac---gaatga-atat
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    5313 52 -     10723 c-taagc-aa-t--gaca--a----gg-a------a------------acaatcac-tg-at-g-taaacaacaac---gaatga-atat
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         4465 52 +      9834 c-taagc-aa-t--gaca--a----gg-a------a------------acaatcac-tg-at-g-taaacaacaac---gaatga-atat
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        22781 52 +     32220 c-taagc-aa-t--gaca--a----gg-a------a------------acaatcac-tg-at-g-taaacaacaac---gaatga-atat
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5936880 52 +   6242583 c-taagc-aa-t--gaca--a----gg-a------a------------acaatcac-tg-at-g-taaacaacaac---gaatga-atat
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        6129 52 +     20839 c-taagc-aa-t--gaca--a----gg-a------a------------acaatcac-tg-at-g-taaacaacaac---gaatga-atat
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2154144 54 +   4065304 g-tcaac-aa-t--aaaa--a----gg-g------a------------taaactac-tg-at-a-caatcaacagc-tttcatga-atat
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     7801 54 -     10553 g-tcagc-aa-t--aaaa--a----gg-g------a------------taaactac-tg-at-a-caatcaacagc-tttcatga-atat
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4849347 43 -   5085361 ----------------at--a----gg-a------g------------ccaactac-ta-at-a-caatcaacaac-atggatg-aatat
i Ursus_maritimus.KK499267.1                             I 14 C 0
s Varecia_rubra.k141_590885                                   9900 54 +     50397 c-tcagc-aa-t--aaaa--a----gg-a------a------------caaactac-tg-at-a-caatcaacaac-atggatga-atgt
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                              9955 54 +     24756 c-tcagc-aa-t--aaaa--a----gg-a------a------------caaactac-tg-at-a-caatcaacaac-atggatga-atgt
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5370803 51 -   5488506 c-tcagca-a-t--aaaa--a----ga-a------a------------caaactac-tg-at-a-caatcaac----atggatga-atat
i Vicugna_pacos.KN270157.1                               I 4 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  9730 31 -     43706 -----------------------------------------------------tac-ta-at-a-caatcaacaac-atggatg-aatat
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          4073 39 +     86975 ----------------at--a----gg-a------g------------caaactac-ta-at-a-cagtcaacaac-atgga-----tat
i Zalophus_californianus.ZalCal_flattened_line_17732     I 14 C 0
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Saguinus_geoffroyi.k141_1413670                            12092  0 -     13588 C
e Chiropotes_albinasus.k141_2813271                           8451 841 +     11226 I
e Cebus_unicolor.k141_219506                                 14903  0 -     16904 I
e Cebus_olivaceus.k141_1000828                                1853 231 -      2944 I
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Mus_pahari.LT608297.1                                   31352818  0 -  89631738 C
e Mus_spretus.CM004101.1                                  90750234  0 - 130317789 C
e Mus_musculus.chr8                                       87648156  0 - 129401213 C
e Mus_caroli.LT608237.1                                   84359172  0 - 120012414 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Xerus_inauris.XerIna_scaffold_48378                        22715  0 -     24430 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   52652  8 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Spermophilus_dauricus.KZ294078.1                         1951468 299 -   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11304  0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152480  8 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rattus_norvegicus.chr16                                 53568239  0 +  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Psammomys_obesus.NESX01036370.1                             8401  0 -     21651 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18191985  0 -  18517816 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Pan_paniscus.KQ411613.1                                    41837 195 +     80009 I
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7577 1418 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    77382  0 +    102263 C
e Ondatra_zibethicus.OndZib_scaffold_46174                   22267 24 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11258701  7 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12180532  2 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 30759  0 +    140813 C
e Marmota_marmota.CZRN01000018.1                          33100580 298 -  40650429 I
e Manis_pentadactyla.KN006162.1                              50341  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352  0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Ictidomys_tridecemlineatus.JH393364.1                    7518272 302 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Ellobius_talpinus.LOJH01109367.1                            3704  7 -      6299 I
e Ellobius_lutescens.LOEQ01008920.1                          17650  7 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089466 1162 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            62283 174 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    835315  0 +   1526836 C
e Cricetulus_griseus.LT883664.1                           11665468  2 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 48141  0 +     63868 C
e Condylura_cristata.JH655891.1                           17547413  8 -  53390261 I
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    136243  0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      10117 439 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     72139 576 -     89534 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     68454  0 +     87051 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       4649 35 +     62944 C--------AAAAATATTAGTCT-A----------C-----------------------ATG----------------A--A--AG----------------AAACGAGG---C--------------AC
s Acinonyx_jubatus.LLWD01001279.1                           826264 45 -   1699592 c--------a--------------a----------a-aacac-t--atg----ctaa--gcg----------------a--a--agaa--a----------ctaaa-------gtcaa--aaaca-c-ac
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9509524 45 -  29979442 c--------a--------------a----------a-aatac-t--atg----ctaa--atg----------------a--a--aga-c-a----------ctaaa-------ttcaa--aaata-t-ac
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             78309 45 -    347723 c--------a--------------aa---------a-aatac-tg--tg----ctaa--ttg----------------a--a--agaa--a----------ctaag-------ttcaa--aa-ta-t-ac
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   12564 35 -     52922 c--------caaaatattagtct-a----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         12507 35 -     28001 c--------caaaatattagtct-a----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          2953 35 -     18505 c--------caaaatattagtct-a----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           3802 35 -     12518 c--------caaaatattagtct-a----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                              1363 35 -     27731 a--------aaaaatattagtct-a----------a-----------------------gtg----------------a--c--ag----------------gaagcagg---c--------------ac
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                1488 35 +      3134 a--------aaaaatattagtct-a----------a-----------------------gtg----------------a--c--ag----------------gaaccagg---c--------------ac
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               1623 35 -     45847 a--------aaaaatattagtct-a----------a-----------------------gtg----------------a--c--ag----------------gaagcagg---c--------------ac
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                22829 35 +     25266 a--------aaaaatattagtct-a----------a-----------------------gtg----------------a--c--ag----------------gaaccagg---c--------------ac
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           2013 35 +      2906 a--------aaaaatattagtct-a----------a-----------------------gtg----------------a--c--ag----------------gaaccagg---c--------------ac
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            16126 35 -     18578 a--------aaaaatattagtct-a----------a-----------------------gtg----------------a--c--ag----------------gaaccagg---c--------------ac
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              1513 35 +     47717 a--------aaaaatattagtct-a----------a-----------------------gtg----------------a--c--ag----------------gaaccagg---c--------------ac
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             1643 35 -      3544 a--------aaaaatattagtct-a----------a-----------------------gtg----------------a--c--ag----------------gaaccagg---c--------------ac
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             12863 35 +     50774 a--------aaaaatattagtct-a----------a-----------------------gtg----------------a--c--ag----------------gaaccagg---c--------------ac
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184042 44 +    412891 c--------a--------------a----------agat-a--t---taca--ctaa--gtg----------------a--a--agaa--aa----------ca-g-------caca--gaggtc-t-at
i Anoura_caudifer.AnoCau_scaffold_1412                   I 29 C 0
s Aotus_azarae.k141_3104676                                  13484 35 -     33861 c--------aaaaatactagtc-ta----------a-----------------------gcg----------------a--c--ag----------------aaaccagg---c--------------cc
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            13504 35 -     34016 c--------aaaaatactagtc-ta----------a-----------------------gcg----------------a--c--ag----------------aaaccagg---c--------------cc
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4295901 35 -   5030052 C--------AAAAATACTAGTC-TA----------A-----------------------GCG----------------A--C--AG----------------AAACCAGG---C--------------CC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             13506 35 -     34685 c--------aaaaatactagtc-ta----------a-----------------------gcg----------------a--c--ag----------------aaaccagg---c--------------cc
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               26627 35 -     47192 c--------aaaaatactagtc-ta----------a-----------------------gcg----------------a--c--ag----------------aaaccagg---c--------------cc
i Aotus_vociferans.k141_344750                           C 0 C 0
s Arctocebus_calabarensis.k141_2318572                        9709 45 +     14667 c--------caaaatattaggct-a----------a-----------------------atg----------------a--a--ag----------------aatgaaag---tgtaa--aaa-gct-tc
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3454 44 +     43469 c--------a--------------a----------agat-a--t--ttcg---ctaa--gtg----------------a--a--agaa--aa----------ca-g-------caca--gaggtc-t-at
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 29 C 0
s Avahi_laniger.k141_765380                                  52229 45 -     92717 c--------aaaaatattaggct-a----------t-----------------------gtg----------------a--a--aa----------------aaacaaag---cataa--aaa-gct-ac
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              52858 45 +     85213 c--------aaaaatattaggct-a----------t-----------------------gtg----------------a--a--aa----------------aaacaaag---cataa--aaa-gct-ac
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             3245 34 -     10423 a--------aaaaatattagtc--a----------a-----------------------gtg----------------a--c--ag----------------aatccagg---c--------------cc
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             22746 34 +     31915 c--------aaaaatattagtc--a----------a-----------------------gtg----------------a--c--ag----------------aatccagg---c--------------cc
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            3215 34 +      5267 a--------aaaaatattagtc--a----------a-----------------------gtg----------------a--c--ag----------------aatccagg---c--------------cc
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23588429 34 - 189096842 A--------AAAAATATTAGTC--A----------A-----------------------GTG----------------A--C--AG----------------AATCCAGG---C--------------CC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              9959 34 -     12001 a--------aaaaatattagtc--a----------a-----------------------gtg----------------a--c--ag----------------aatccagg---c--------------cc
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10001367 24 -  17673402 c--------a--------------a----------a-aata--tt-at--a--ctaa--gtg----------------a--a--gg--------------------------------------------
i Camelus_bactrianus.KN276810.1                          C 0 I 9
s Camelus_dromedarius.KN272107.1                           2333825 24 -   7040546 c--------a--------------a----------a-aata--tt-at--a--ctaa--gtg----------------a--a--gg--------------------------------------------
i Camelus_dromedarius.KN272107.1                         C 0 I 9
s Camelus_ferus.KB017975.1                                  402107 24 -   1652518 c--------a--------------a----------a-aata--tt-at--a--ctaa--gtg----------------a--a--gg--------------------------------------------
i Camelus_ferus.KB017975.1                               C 0 I 9
s CanFam4.chr16                                           17798145 44 -  60362399 c--------a--------------a----------a-aatag-t--atg----ctaa---tg----------------a--a--agaa--a----------ccaaa-------ctcaa--aaata-t-ac
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184202 44 -    185531 c--------a--------------a----------a-aatag-t--atg----ctaa---tg----------------a--a--agaa--a----------ccaaa-------ctcaa--aaata-t-ac
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9033588 44 -   9314153 c--------a--------------a----------a-aatag-t--atg----ctaa---tg----------------a--a--agaa--a----------ccaaa-------ctcaa--aaata-t-ac
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17957853 44 -  59632846 c--------a--------------a----------a-aatag-t--atg----ctaa---tg----------------a--a--agaa--a----------ccaaa-------ctcaa--aaata-t-ac
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18499365 44 +  63665305 c--------a--------------a----------a-aatag-t--atg----ctaa---tg----------------a--a--agaa--a----------ccaaa-------ctcaa--aaata-t-ac
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           154519 45 -    496798 C--------AACAATACTAAGCc-g----------a-----------------------gtg----------------a--a--ag----------------aaaccaaa---cacaa--aaatc-t-ac
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                3816 44 -     11696 c--------a--------------a----------agat-a--tt-atg----ctca--gtg----------------a--a--agaa--aa----------ca-g-------ca-aa-gaggtc-t-at
i Carollia_perspicillata.CarPer_scaffold_92756           I 29 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     91963 45 +    217609 c--------a--------------a----------a-aatac-t--a--ca--ctaa--gtg----------------a--a--caaa--a----------ccaag-------cac---gaaagg-ccac
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          7869 34 -     11392 a--------aaaaatattagtc--a----------a-----------------------gtg----------------a--c--ag----------------aatccagg---c--------------cc
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               3967 34 -      7577 a--------aaaaatattagtc--a----------a-----------------------gtg----------------a--c--ag----------------aatccagg---c--------------cc
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         4030 44 +     31688 c--------aacaatactcagcc-a----------g-----------------------gtg----------------a--a--ag----------------aaaccaa----cacaa--aaatc-t-ac
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12230404 45 +  27778364 c--------a--------------a----------a-aata--tt-a-gg---ctaa--gtg----------------a--a--agaa--a----------ccaag-------cacaa--aa-ggct-ac
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1431 45 -     25243 c--------a--------------a----------a-aata--tt-a-gg---ctaa--gtg----------------a--a--agaa--a----------ccaag-------cacaa--aa-ggct-ac
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4473519 35 +   4669795 c--------caaaatatcagtCT-A----------C-----------------------ATG----------------A--A--AG----------------AAACCAGG---C--------------AC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        12068 35 -     19203 c--------caaaatatcagtct-a----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           6490 35 +      8260 c--------caaaatatcagtct-a----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           6716 35 +     27781 c--------caaaatatcagtct-a----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         6874 35 -     20310 c--------caaaatattagtct-a----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           9853 35 +     29689 c--------caaaatattagtct-a----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            4284 35 +      9989 c--------caaaatattagtct-a----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          12532 35 -     27936 c--------caaaatattagtct-a----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            1409 35 -     17152 c--------caaaatattagtct-a----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38814936 35 +  39242232 c--------caaaatattagtct-a----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21220638 35 -  21565898 c--------caaaatattagtct-a----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       37756 35 -     53127 c--------caaaatattagtct-a----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        5016 35 +      7159 c--------caaaatattagtct-a----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       12559 35 -     27947 c--------caaaatattagtct-a----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         12532 35 +     17596 c--------caaaatattagtct-a----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          1755 35 +     26000 c--------caaaatattagtct-a----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_713168             116 48 -      2554 ttttt----a--------------a----------a-a--a--tgtatg----ctaa--gtg----------------a--a--aga-c-----------cccagg-------cacaa--aa-ggct-ac
i Chaetophractus_vellerosus.ChaVel_scaffold_713168       C 0 C 0
s Cheirogaleus_major.k141_333249                             19638 45 -     52598 c--------aaaaatattaggct-a----------a-----------------------gtg----------------a--a--aa----------------aaacaaag---ca---tgaaaagct-ac
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           14989 45 +     57038 c--------aaaaatattaggct-a----------a-----------------------gtg----------------a--a--aa----------------aaacaaag---cataa--aaa-gct-ac
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chlorocebus_aethiops.ctg25                              18426505 35 -  18827391 c--------caaaatattagtct-a----------c-----------------------acg----------------a--a--ag----------------aaaccagg---c--------------ac
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       12942 35 -     50209 c--------caaaatattagtct-a----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135419942 35 + 135778131 C--------CAAAATATTAGTCT-A----------C-----------------------ATG----------------A--A--AG----------------AAACCAGG---C--------------AC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 16827 48 +     19366 a----aaaaa--------------a----------acat-a---a-atg----ctaa--gtg----------------a--a--agaa--a----------ccagg-------cacaa--aa-ggct-at
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            171926 49 +    839153 a---aaaaaa--------------a----------acat-a---a-atg----ctaa--gtg----------------a--a--agaa--a----------ccagg-------cacaa--aa-ggct-at
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_484642                 72 39 +      4343 -----------------------------------g-----------------------ctct-a-------------g--a--aga-c-aag-g------tcaaa----tattacaacgaaatg-t-gc
i Chrysochloris_asiatica.ChrAsi_scaffold_484642          N 0 C 0
s Colobus_angolensis.KN981557.1                            1908457 35 +   2368649 C--------CAAAATATTAGTCT-C----------C-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199948133 35 + 200372422 c--------caaaatgttagtct-c----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              34995 35 +     84244 c--------caaaatattagtct-c----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          13294 45 -     20389 c--------a--------------a----------a-aata--tt-at--a--ccaa--ata----------------a--a--agaa--a----------ccaag-------cacaa--aa-ggct-at
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 385 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27441 45 -     87169 c--------a--------------a----------a-aacac-t--atg----ctaa--gca----------------a--a--agaa--a----------ctaaa-------ctcaa--aaata-c-ac
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12535851 48 -  12879189 c--------aaaaatactaggct-a----------a-----------------------gta----------------a--a--aaaa--a-----------aaaaaaag---cataa--aaa-gct-ac
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8628832 44 +  20541912 c--------a--------------c----------agat-ac-t--acg----ctaa--gcg----------------a--a--agaa--aa----------ca-g-------caca--gagctc-c-ac
i Desmodus_rotundus.KZ672289.1                           I 13 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672254 45 +   1390856 c--------a--------------a----------a-aata--tt-atg----ctaa--gtg----------------a--a--agaa--a-g---------caag-------cacaa--aa-ggct-ac
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    5007 45 +    198055 c--------a--------------a----------a-aata--tt-a-gg---ctaa--gtg----------------a--a--agaa--a----------ccaag-------cacaa--aa-ggct-ac
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Echinops_telfairi.JH980293.1                            48778550 29 + 111700974 -----------------------------------G-----------------------TTC----------------G--A--AG-----------ACACTCAAA------AC----ACAACTG-G-GG
i Echinops_telfairi.JH980293.1                           I 232 C 0
s Eidolon_helvum.KE759718.1                                   9485 44 +     11740 c--------a--------------a----------a-a-caa-t--atg----ctag--gta----------------a--a--agaa--a----------ccaag-------cacaa--aaa-gct-ac
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Enhydra_lutris.KZ291758.1                               16328277 45 -  41312741 c--------a--------------a----------a-aatac-t--atg----ctag--gtg----------------a--a--agaa--a----------ctaag-------ttcaa--aaata-t-ac
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1282316 45 +   4378816 c--------a--------------a----------a-agtac-t--atg----ctaa--gcg----------------a--a--agaa--a--t--------caag-------cacaa--aaaac-t-tc
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18530137 45 -  39960074 c--------a--------------a----------a-agtac-t--atg----ctaa--gtg----------------a--a--agaa--a--t--------caag-------cacaa--aaaac-t-tc
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               32152 45 +    498745 c--------a--------------a----------a-agtac-t--atg----ctaa--gtg----------------a--a--agaa--a--t--------caag-------cacaa--aaaac-t-tc
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21203113 35 -  21539334 c--------caaaatattagtct-a----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              12332 47 -     14127 c--------aaaaatattaggct-a----------a-----------------------gtg----------------aa-aa-aa----------------aaacaaag---cataa--aaa-g-ccac
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                5030 47 -     16928 c--------aaaaatattaggct-a----------a-----------------------gtg----------------aa-aa-aa----------------aaacaaag---cataa--aaa-g-ccac
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              14059 48 -     25546 c--------aaaaatattaggct-a----------a-----------------------gtg----------------aaaaa-aa----------------aaacaaag---cataa--aaa-g-ccac
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            11257 47 +     26330 c--------aaaaatattaggct-a----------a-----------------------gtg----------------aa-aa-aa----------------aaacaaag---cataa--aaa-g-ccac
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 12497 47 +     23973 c--------aaaaatattaggct-a----------a-----------------------gtg----------------aa-aa-aa----------------aaacaaag---cataa--aaa-g-ccac
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                11257 47 +     75513 c--------aaaaatattaggct-a----------a-----------------------gtg----------------aa-aa-aa----------------aaacaaag---cataa--aaa-g-ccac
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  9199 47 +     97555 c--------aaaaatattaggct-a----------a-----------------------gtg----------------aa-aa-aa----------------aaacaaag---cataa--aaa-g-ccac
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            12128 47 +     26496 c--------aaaaatattaggct-a----------a-----------------------gtg----------------aa-aa-aa----------------aaacaaag---cataa--aaa-g-ccac
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  2732 47 -     17153 c--------aaaaatattaggct-a----------a-----------------------gtg----------------aa-aa-aa----------------aaacaaag---cataa--aaa-g-ccac
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              12308 47 +    111500 c--------aaaaatattaggct-a----------a-----------------------gtg----------------aa-aa-aa----------------aaacaaag---cataa--aaa-g-ccac
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20236133 45 + 206538554 c--------a--------------a----------a-aacac-t--acg----ctaa--gcg----------------a--a--agaa--a----------ctaaa-------gtcaa--aaaca-c-ac
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20194976 45 + 205367284 c--------a--------------a----------a-aacac-t--atg----ctaa--gcg----------------a--a--agaa--a----------ctaaa-------gtcaa--aaaca-c-ac
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  8490 45 -     36744 c--------a--------------a----------a-aacac-t--atg----ctaa--gcg----------------a--a--agaa--a----------ctcaa-------gtcaa--aaaca-c-ac
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     424660 45 -    453645 t--------aaaaatattaggct-a----------a-----------------------gtg----------------a--a--ag----------------aaagaaag---cataa--aaa-gct-tc
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             2367 45 +     11339 t--------aaaaatattaggct-a----------a-----------------------gtg----------------a--a--ag----------------aaagaaag---cataa--aaa-gct-tc
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1959596                            6175 45 +      6795 t--------aaaaatattaggct-a----------a-----------------------gtg----------------a--a--ag----------------aaagaaag---cataa--aaa-gct-tc
i Galagoides_demidoff.k141_1959596                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_197845               2592 31 -      3123 c--------a--------------a----------a-----------------------gta----------------a--a--ag----------------caac-tag---cacaa--aaatc-t-ac
i Galeopterus_variegatus.GalVar_scaffold_197845          C 0 C 0
s Gorilla_beringei.k141_3596273                              13901 35 -     32273 c--------aaaaatattagcct-a----------c-----------------------atg----------------a--a--ag----------------aaacgagg---c--------------at
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.CYUI03001814.1                             30411 35 -     31004 c--------aaaaatattagtct-a----------c-----------------------atg----------------a--a--ag----------------aaacgagg---c--------------ac
i Gorilla_gorilla.CYUI03001814.1                         I 184 I 104
s Hapalemur_alaotrensis.k141_170648                           5388 46 -     19426 c--------aaaaatattaggct-a----------a-----------------------gtg----------------a--aa-aa----------------aaacaaag---cataa--aaa-g-ccac
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             10537 46 -     15286 c--------aaaaatattaggct-a----------a-----------------------gtg----------------a--aa-aa----------------aaacaaag---cataa--aaa-g-ccac
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             12176 46 +     18253 c--------aaaaatattaggct-a----------a-----------------------gtg----------------a--aa-aa----------------aaacaaag---cataa--aaa-g-ccac
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         12277 46 -     41752 c--------aaaaatattaggct-a----------a-----------------------gtg----------------a--aa-aa----------------aaacaaag---cataa--aaa-g-ccac
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         12115 46 -     16460 c--------aaaaatattaggct-a----------a-----------------------gtg----------------a--aa-aa----------------aaacaaag---cataa--aaa-g-ccac
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               241278 45 +    327341 c--------a--------------g----------a-a--acatt-atgca-a--a---ggg----------------a--a--agaa--a----------ctaaa-------ctcaac-aa-ta-c-ac
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_403422                 606 25 -       893 -------------------------------------------------------------c----------------c--a--agaa----g--------ccagg-------caca-c-aa--gct-ac
i Heterohyrax_brucei.HetBruBak_scaffold_403422           I 63 C 0
s Hipposideros_armiger.JXIK01000431.1                       110773 28 +   1711038 -----------------------------------------------------------gtg----------------a--a--agaa--a----------ccaag-------caca--gaa-ggct-ac
i Hipposideros_armiger.JXIK01000431.1                    I 17 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               42202 28 +     43066 -----------------------------------------------------------gtg----------------a--a--agaa----g--------ccaag-------caca--gaa-ggct-ac
i Hipposideros_galeritus.HipGal_scaffold_29171           I 16 C 0
s Hoolock_leuconedys.ctg274                                    432714 35 +    630532 c--------aaaaatattagtct-a----------c-----------------------gtg----------------a--a--ag----------------gaaccagg---c--------------ac
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  43417 45 +     55795 c--------a--------------a----------a-aacac-t--atg----ctaa--aca----------------a--a--agaa--a----------ctaaa-------ctcaa--aaata-c-ac
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_232023                                 480 35 -     12752 c--------aaaaatattagtct-a----------t-----------------------gtc----------------a--a--ag----------------gaaccagg---c--------------ac
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                                524 35 +     14092 c--------aaaaatattagtct-a----------t-----------------------gtc----------------a--a--ag----------------gaaccagg---c--------------ac
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189541307 35 - 191637585 c--------aaaaatattagtct-a----------t-----------------------gtc----------------a--a--ag----------------gaaccagg---c--------------ac
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3334201 35 -  11177569 c--------aaaaatattagtct-a----------t-----------------------gtc----------------a--a--ag----------------gaaccagg---c--------------ac
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_3655594                                   21081 45 +     31101 c--------aaaaatattaggct-a----------a-----------------------gtg----------------a--a--aa----------------aaacaaag---cataa--aaa-gct-ac
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15522620 46 -  30322482 c--------aaaaatattaggct-a----------a-----------------------gtg----------------a--aa-aa----------------aaacgaag---cataa--aaa-g-ccac
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        5569 34 +     64341 c--------aaaaatattagtc--a----------a-----------------------gtg----------------a--c--ag----------------aaaccagg---c--------------cc
i Leontocebus_fuscicollis.k141_1820339                   I 11 C 0
s Leontocebus_illigeri.k141_3350179                           2630 34 +      4941 c--------aaaaatattagtc--a----------a-----------------------gtg----------------a--c--ag----------------aaaccagg---c--------------cc
i Leontocebus_illigeri.k141_3350179                      I 11 C 0
s Leontocebus_nigricollis.k141_4610752                        5498 34 +     35603 c--------aaaaatattagtc--a----------a-----------------------gtg----------------a--c--ag----------------aaaccagg---c--------------cc
i Leontocebus_nigricollis.k141_4610752                   I 11 C 0
s Leontopithecus_chrysomelas.k141_1519602                    27001 34 +     38576 c--------aaaaatgttagtc--a----------a-----------------------gtg----------------a--c--ag----------------aatccagg---c--------------cc
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         23698 34 +     66356 c--------aaaaatgttagtc--a----------a-----------------------gtg----------------a--c--ag----------------aatccagg---c--------------cc
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          9548 26 -     23766 ---------------------------------------------------------------------------------aaaaa----------------aaacaaag---ca---tgaaaagct-ac
i Lepilemur_ankaranensis.k141_596936                     I 20 C 0
s Lepilemur_dorsalis.k141_577674                             27614 26 +     45836 ---------------------------------------------------------------------------------aaaaa----------------aaacaaag---ca---tgaaaagct-ac
i Lepilemur_dorsalis.k141_577674                         I 20 C 0
s Lepilemur_ruficaudatus.k141_121139                           140 25 +     25010 ---------------------------------------------------------------------------------aa-aa----------------aaacaaag---ca---tgaaaagct-ac
i Lepilemur_ruficaudatus.k141_121139                     N 0 C 0
s Lepilemur_septentrionalis.k141_185316                      25550 26 +     54090 ---------------------------------------------------------------------------------aaaaa----------------aaacaaag---ca---tgaaaagct-ac
i Lepilemur_septentrionalis.k141_185316                  I 20 C 0
s Leptonychotes_weddellii.KB714746.1                       3041811 48 +   3914936 a--------a--------------a----------a-attac-tg-atgga-actaa--gtg----------------a--a--agaac-------------taag-------ttcaa--aaatg-t-ac
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     4492 39 -     14121 t--------a--------------a----------a-a---------------------atattag---agga--a-ga--a--ag----------------caat-------cacaaaga---g-ccac
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1435066 35 +   1826925 c--------caaaatatcagtct-a----------c-----------------------aag----------------a--a--ag----------------aaactagg---c--------------ac
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            4135 45 +     11245 c--------aaaaatattaggct-a----------a-----------------------atg----------------a--a--ag----------------aatgaaag---c--ttc-aaaagct-tc
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1002974 45 +   6120653 c--------aaaaatattaggct-a----------a-----------------------atg----------------a--a--ag----------------aatgaaag---c--ttc-aaaagct-tc
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4215946 42 -  43346337 a--------a-------------aaatattatgcaa-----------------------gtc----------------a--a--agaa--a----------ccagg-------cacaa--aa--gct-ac
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17954093 44 -  59628241 c--------a--------------a----------a-aatag-t--atg----ctaa---tg----------------a--a--agaa--a----------ccaaa-------ctcaa--aaata-t-ac
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               4881 35 +     40492 c--------caaaatatcagtct-a----------c-----------------------acg----------------a--a--ag----------------aaaccagg---c--------------ac
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59674143 35 +  60120075 c--------caaaacatcagtct-a----------c-----------------------acg----------------a--a--ag----------------aaaccaga---c--------------ac
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 10637 35 -     26193 c--------caaaatatcagtct-a----------c-----------------------acg----------------a--a--ag----------------aaaccagg---c--------------ac
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            78441 35 -    114318 c--------caaaatatcagtct-a----------c-----------------------acg----------------a--a--ag----------------aaaccagg---c--------------ac
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  4140 35 -     23192 c--------caaaatatcagtct-a----------c-----------------------acg----------------a--a--ag----------------aaaccagg---c--------------ac
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                13601 35 -     29190 c--------caaaatatcagtct-a----------c-----------------------acg----------------a--a--ag----------------aaaccagg---c--------------ac
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  22168 35 +     37952 c--------caaaatatcagtct-a----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186837256 35 + 187317192 c--------caaaatatcagtCT-A----------C-----------------------ACG----------------A--A--AG----------------AAACCAGG---C--------------AC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25455818 35 -  25927173 c--------caaaatatcagtCT-A----------C-----------------------ACG----------------A--A--AG----------------AAACCAGG---C--------------AC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  78017 35 +     89720 c--------caaaatatcagtct-a----------c-----------------------ccg----------------a--a--ag----------------aaaccagg---c--------------ac
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 5014 35 +     20474 c--------caaaatatcagtct-a----------c-----------------------acg----------------a--a--ag----------------aaaccagg---c--------------ac
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   4815 35 -     14993 c--------caaaatatcagtct-a----------c-----------------------acg----------------a--a--ag----------------aaaccagg---c--------------ac
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  327686 35 -    668171 c--------caaaatatcagtct-a----------c-----------------------acg----------------a--a--ag----------------aaaccagg---c--------------ac
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 3126 35 -     24072 c--------caaaatatcagtct-a----------c-----------------------acg----------------a--a--ag----------------aaaccagg---c--------------ac
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               23755 35 -     45290 c--------caaaatatcagtct-a----------c-----------------------ccg----------------a--a--ag----------------aaaccagg---c--------------ac
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 89578 44 +     94391 c--------a--------------a----------a-a-cag-t--atg----ctag--gta----------------a--a--aaaa--aa----------caag-------cacaa--aaa-gct-ac
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23935339 35 -  24302211 c--------caaaatatcagtct-a----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               349471 35 +    752769 c--------caaaatatcagtct-a----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        13570 45 -    207569 a--------c--------------a----------g-ggta--tt-atgca-a--a---atg----------------a--a--ataa----gt--------caga-------c-caa-gaaa-g-acaa
i Megaderma_lyra.MegLyr_scaffold_4542                    I 4272 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              8994 45 +     13704 c--------a--------------a----------a-aatac-t--atg----ctag--gtg----------------a--a--agaa--a----------ctaag-------ttcaa--aaata-t-ac
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mico_argentatus.k141_1239457                                3791 34 -      7380 a--------aaaaatattagtc--a----------a-----------------------gtg----------------a--c--ag----------------aatccagg---c--------------cc
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               2857 34 +     18990 a--------aaaaatattagtc--a----------a-----------------------gtg----------------a--c--ag----------------aatccagg---c--------------cc
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      3796 34 -      7356 a--------aaaaacattagtc--a----------a-----------------------gtg----------------a--c--ag----------------aatccagg---c--------------cc
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18290030 25 -  93316391 C---TAAGTGAAAATATTAGGCT-A----------A-----------------------Gtg--------------------------------------------------------------------
i Microcebus_murinus.CM007674.1                          C 0 I 23
s Microgale_talazaci.MicTal_scaffold_6613                    18400 29 -    145209 -----------------------------------G-----------------------TTG----------------G--A--AG-----------ATATTCAAA------AC----ACAATTG-G-TA
i Microgale_talazaci.MicTal_scaffold_6613                I 232 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                14362 44 -     19307 c--------c--------------a----------c-agta--tt-acg----ttaa--gtg----------------a--a--agaa--aa----------ca-g-------caca--gaggtc-t-ac
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 29 C 0
s Miopithecus_ogouensis.k141_534055                           7062 35 -     28506 c--------caaaatattagtct-a----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         4679 48 -      8324 a--------a--------------a----------a-attac-tg-atgga-actaa--gtg----------------a--a--agaac-------------taag-------ttcaa--aaatg-t-ac
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      7602 21 -     37649 c--------aaaaatattaggct-a----------a-----------------------gtg----------------a---------------------------------------------------
i Mirza_zaza.k141_952172                                 C 0 I 23
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140278 45 -    366855 c--------a--------------a----------agat-a--tt-atg----ctaa--gtg----------------a--a--agaa--aa----------caag-------caca--gaagtc-t-ac
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   34390 45 +     37127 c--------a--------------g----------a-aacac-t--atgca-a--a---ggg----------------a--a--agaa--a----------ctaaa-------ctcaac-aa-ta-c-ac
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Mustela_putorius.JH418006.1                               300171 45 -  14710649 c--------a--------------a----------a-aatac-t--atg----ctag--gtg----------------a--a--agaa--a----------ctaag-------tttaa--aaata-t-ac
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187754 49 +    196477 tttt-a---a--------------a----------a-a-aac----atg-t-gttat--gtg----------------a--a--agaa-t-----------ccagg-------cacaa--aa-ggct-at
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nasalis_larvatus.k141_413338                               13058 35 +     21681 c--------caaaatattagtct-c----------c-----------------------atg----------------a--a--ag----------------aaaccagg---t--------------gc
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20305937 48 +  31847680 a--------a--------------a----------a-attac-tg-atgga-actaa--gtg----------------a--a--agaac-------------taag-------ttcaa--aaatg-t-ac
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9148351 44 -   9404916 c--------a--------------a----------a-aatag-t--atg----ctaa---tg----------------a--a--agaa--a----------ccaaa-------ctcaa--aaata-t-ac
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102577895 44 - 196305487 c--------aaaaatattaggct-a----------a-----------------------atg----------------a--a--ag----------------aatgaaag---tgtaa--aa--gct-tc
i Nycticebus_bengalensis.LG01                            C 0 I 274
s Nycticebus_coucang.k141_5327727                             5581 44 +      8486 c--------aaaaatattaggct-a----------a-----------------------atg----------------a--a--ag----------------aatgaaag---tgtaa--aa--gct-tc
i Nycticebus_coucang.k141_5327727                        C 0 I 295
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105748322 45 + 199412804 c--------aaaaatattaggct-a----------a-----------------------atg----------------a--a--ag----------------aatgaaag---cgtaa--aaa-gct-ta
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 267
s Ochotona_princeps.JH802162.1                             1361550 45 +   3988456 a--------a--------------a----------a--t--------------------atattaggttaggaggaaga--a--ga----------------caag-------cacaaag-ggt--t-at
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              505604 61 -   2017862 a--------a--------------a----------a-aatac-tg-atgga-actaa--gtg----------------a--a--agaactaagtgaaagaactaag-------ttcaa--aaata-t-ac
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67145337 39 + 174332312 c--------a--------------a----------a-a---------------------gtattag---agga--a-ga--a--ag----------------caat-------cacaaaga---g-ccac
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       461315 44 -    559221 c--------a--------------a----------a-aatag-t--atg----ctaa---tg----------------a--a--agaa--a----------ccaaa-------ctcaa--aaata-t-ac
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         2202 45 +      8798 t--------aaaaatattaggct-a----------a-----------------------gtg----------------a--a--ag----------------aaagaaag---cataa--aaa-gct-tc
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             694366 46 -   1103335 t----a---aaaaatattaggct-a----------a-----------------------gtg----------------a--a--ag----------------aaagaaag---cataa--aaaaC-T-TC
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.NBAG03001836.1                             27940 17 +     51860 ------------------------------------------------------------TG----------------A--A--AG----------------AAACGAGG---C--------------AC
i Pan_troglodytes.NBAG03001836.1                         I 294 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  150143 45 +    230217 c--------a--------------a----------a-aacac-t--atg----ctaa--gcg----------------a--a--agaa--a----------ctaaa-------gtcaa--aaaca-c-ac
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                263348 45 +  18783137 c--------a--------------a----------a-aacac-t--atg----ctaa--gcg----------------a--a--agaa--a----------ctaaa-------gtcaa--aaaca-c-ac
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4719986 45 -   8748460 c--------a--------------a----------a-aacac-t--atg----ctaa--gcg----------------a--a--agaa--a----------ctaaa-------gtcaa--aaaca-c-ac
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183441093 35 + 183742232 c--------caaaatatcagtCT-A----------C-----------------------ATG----------------A--A--AG----------------AAACCAGG---C--------------AC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             4787 35 +     20448 c--------caaaatatcagtct-a----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20561595 35 +  20919399 c--------caaaatatcagtct-a----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   3531 35 +     41871 c--------caaaatatcagtct-a----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     6816 35 +     27711 c--------caaaatatcagtct-a----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  6896 35 +      9205 c--------caaaatatcagtct-a----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11606 45 -     78924 c--------a--------------a----------a-aacac-t--ctg----ctaa--gca----------------a--a--agaa--a----------ctaaa-------ctcaa--aaaca-c-ac
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            8349 45 +     13100 c--------caaaatattaggct-a----------a-----------------------atg----------------a--a--ag----------------aatgaaag---tgtaa--aaa-gct-tc
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             6741 29 +     25941 -----------------------------------a-----------------------atg----------------a--a--ag----------------aatgaaag---tgtaa--aaa-gct-tc
i Perodicticus_potto.k141_1092580                        I 15 C 0
s Piliocolobus_badius.k141_1234363                           41559 31 +     62158 ------------aatattagtct-g----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------tc
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        36290 31 +     89929 ------------aatattagtct-g----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------tc
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            37706 31 +     51399 ------------aatatcagtct-g----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------tc
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14293944 31 -  14605196 ------------AATATTAGTCT-G----------C-----------------------ATG----------------A--A--AG----------------AAACCAGG---C--------------TC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189129029 35 + 189387572 c--------aaaaatattaGTCT-A----------T-----------------------GTG----------------A--A--AG----------------AAACCAGG---C--------------AC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9568637 35 +   9816681 c--------aaaaatattagtct-a----------t-----------------------gtg----------------a--a--ag----------------aaaccagg---c--------------ac
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               71226 35 -     81375 c--------caaaatattagtct-c----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              3046 35 +     19060 c--------caaaatattagtct-c----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 11606 25 -     22811 -------------------------------------------------------------c----------------c--a--agaa----g--------ccagg-------caca-c-aa--gct-ac
i Procavia_capensis.ProCapCap_scaffold_85530             I 4 C 0
s Prolemur_simus.MPIZ01000396.1                            2595298 46 -   4620579 C--------AAAAATATTAGGCT-A----------A-----------------------GTG----------------A--A-AAA----------------ACACAAAG---C---ATAAAAAg-ccac
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     989283 45 +   2598838 c--------aaaaatattaggct-a----------a-----------------------gtg----------------a--a--aa----------------aaacaaag---cataa--aaa-gct-ac
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          27593 45 +     38485 c--------aaaaatattaggct-a----------a-----------------------gtg----------------a--a--aa----------------aaacaaag---cataa--aaa-gct-ac
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             3753 45 +      4256 c--------aaaaatattaggct-a----------a-----------------------gtg----------------a--a--aa----------------aaacaaag---cataa--aaa-gct-ac
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          25106 45 +     35766 c--------aaaaatattaggct-a----------a-----------------------gtg----------------a--a--aa----------------aaacaaag---cataa--aaa-gct-ac
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           3288 45 -     24134 c--------aaaaatattaggct-a----------a-----------------------gtg----------------a--a--aa----------------aaacaaag---cataa--aaa-gct-ac
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        27110 45 -     67325 c--------aaaaatattaggct-a----------a-----------------------gtg----------------a--a--aa----------------aaacaaag---cataa--aaa-gct-ac
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           3346 45 -      6182 c--------aaaaatattaggct-a----------a-----------------------gtg----------------a--a--aa----------------aaacaaag---cataa--aaa-gct-ac
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            13658 45 -     21811 c--------a--------------a----------agat-a--tc-atg----ctac--gtg----------------a--a--agaa--aa----------caag-------caca--gaagtc-t-gc
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39193 45 +     42204 c--------a--------------a----------a-aatac-t--atg----ctag--gtg----------------a--a--agaa--a----------ctaag-------ttcaa--aaata-t-ac
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22975748 37 +  28871421 c--------a--------------a----------a-a-cag-t--atg----ctag--gta----------------a--a--agaa--a----------ccaag-------cac--c---------at
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1358834 37 +   4952924 c--------a--------------a----------a-a-cag-t--atg----ctag--gta----------------a--a--agaa--a----------ccaag-------cac--c---------at
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20273262 45 -  38429054 c--------a--------------a----------a-aacac-t--atg----ctaa--gcg----------------a--a--agaa--a----------ctaaa-------gtcaa--aaaca-c-ac
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             13057 35 -     91421 c--------caaaatattagtct-c----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7607183 35 +   7812017 c--------caaaatattagtct-c----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             13031 35 -     72585 c--------caaaatattagtct-c----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             4738 35 -     11128 c--------caaaatattagtct-c----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91234094 35 - 195417433 c--------caaaatattagTCT-C----------C-----------------------ATG----------------A--A--AG----------------AAACCAGG---C--------------AC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7669743 35 +   7961872 c--------caaaatattagtct-c----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                86759 44 -     96226 c--------a--------------a----------a-a---c-ggtatg----ctag--gta----------------a--a--agaa--a----------cgaag-------cacaa--aaa-gct-ac
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               5883 34 -      8359 c--------aaaaatattagtc--a----------a-----------------------gtg----------------a--c--ag----------------aaaccagg---c--------------cc
i Saguinus_bicolor.k141_2619299                          I 11 C 0
s Saguinus_imperator.k141_717981                              5826 34 -      6207 c--------aaaaatattagtc--a----------a-----------------------gtg----------------a--c--ag----------------aaaccagg---c--------------cc
i Saguinus_imperator.k141_717981                         I 11 C 0
s Saguinus_inustus.k141_699149                               11553 34 +     13640 c--------aaaaatattagtc--a----------a-----------------------gtg----------------a--c--ag----------------aaaccagg---c--------------cc
i Saguinus_inustus.k141_699149                           I 11 C 0
s Saguinus_labiatus.k141_285685                               6415 34 +      8564 c--------aaaaatattagtc--a----------a-----------------------gtg----------------a--c--ag----------------aaaccagg---c--------------cc
i Saguinus_labiatus.k141_285685                          I 11 C 0
s Saguinus_midas.LG03                                    209466697 34 + 209938924 c--------aaaaatattagtc--a----------a-----------------------gtg----------------a--c--ag----------------aaaccagg---c--------------cc
i Saguinus_midas.LG03                                    I 11 C 0
s Saguinus_mystax.k141_374627                                 5903 34 -      9399 c--------aaaaatattagtc--a----------a-----------------------gtg----------------a--c--ag----------------aaaccagg---c--------------cc
i Saguinus_mystax.k141_374627                            I 11 C 0
s Saimiri_boliviensis.NW_024100920.1                     119949266 35 - 121099817 C--------AGAAATATTAGTCT-A----------A-----------------------GTG----------------A--C--AG----------------AATCCAGG---C--------------CC
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       21722 35 +     46362 c--------agaaatattagtct-a----------a-----------------------gtg----------------a--c--ag----------------aaaccagg---c--------------cc
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               21817 35 +     45824 c--------agaaatattagtct-a----------a-----------------------gtg----------------a--c--ag----------------aaaccagg---c--------------cc
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             38445 35 -     64574 c--------agaaatattagtct-a----------a-----------------------gtg----------------a--c--ag----------------aaaccagg---c--------------cc
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               1451 35 -     23631 c--------agaaatattagtct-a----------a-----------------------gtg----------------a--c--ag----------------aaaccagg---c--------------cc
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 21710 35 -     61129 c--------agaaatattagtct-a----------a-----------------------gtg----------------a--c--ag----------------aaaccagg---c--------------cc
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          17563 35 -     19888 c--------caaaatattagtct-c----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      24766 35 +     39453 c--------caaaatattagtct-c----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            5292 35 +     27826 c--------caaaatattagtct-c----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             4812 35 -     19483 c--------caaaatattagtct-c----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      4874 35 +      7198 c--------caaaatattagtct-c----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         13134 35 +     15514 c--------caaaatattagtct-c----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               2728 44 +   1910179 c--------a--------------a----------a-aatat-tg--tg----ctca--atg----------------a--a--agaa--a----------cccag-------atcaa--aa-ta-t-ac
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             29701 45 +     97271 c--------a--------------a----------a-aatac-tg--cg----ctaa--gtg----------------a--a--agaa--a----------ctaag-------ttcaa--aaata-t-ac
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              17279 45 -    196729 c--------a--------------g----------a-aacac-t--atg----ctaa--gtg----------------a--a--agaa--a----------ctaaa-------ctcaac-aa-ta-c-ac
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.JH118708.1                                      34476 45 -     47482 c--------a--------------a----------a-a--ac----at-tacactaa--atg----------------a--a--taaa--a----------ccaaa-------cacaa--aa-gg-ccac
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1091349 35 -   1523678 c--------aaaaatattagtct-a----------c-----------------------gtg----------------a--a--ag----------------gaaccagg---c--------------ac
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 9575 45 +     41958 c--------a--------------c----------agat-ag-t--atg----ctaa--gtg----------------a--a--agaa--aa----------caag-------cacaa--aagtc-t-ac
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 2 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 71106 53 +    116680 tttttaaaaa--------------a----------a-a-aac----atg-t-gttat--gtg----------------a--a--agaa-t-----------ccagg-------cacaa--aa-ggct-at
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      117727 45 -    156842 c--------a--------------a----------a-aata--tt-atg----ctaa--gtg----------------a--a--agaa--a----------ccaag-------tacaa--aa-ggct-ac
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    386180 45 +    539355 c--------a--------------a----------a-aata--tt-atg----ctaa--gtg----------------a--a--agaa--a----------ccaag-------cacaa--aa-ggct-ac
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               24641 45 +     70052 c--------aacaatattaagcc-a----------a-----------------------gtg----------------a--a--ag----------------aaaccaaa---cacaa--aaatc-t-gc
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_2029956                               3981 45 +      4644 c--------aacaatattaagcc-a----------a-----------------------gtg----------------a--a--ag----------------aaaccaaa---cacaa--aaatc-t-gc
i Tarsius_wallacei.k141_2029956                          C 0 C 0
s Theropithecus_gelada.CM009954.1                        186426459 35 + 186847797 c--------caaaatatcagtCT-A----------C-----------------------ATG----------------A--A--AG----------------AAACCAGG---C--------------AC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   3671 48 +      8208 ttttt----a--------------a----------a-a--at-tt-atgca-a--a---gtg----------------a--a--aga--t----------cccagg-------cacaa--aa-ggct-ac
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     79903 44 +    610378 c--------a--------------a----------agat-a--t---taca--ctaa--gtg----------------a--a--agaa--aa----------cg-a-------cacagcg--gtc-t-at
i Tonatia_saurophila.TonSau_scaffold_294                 I 29 C 0
s Trachypithecus_auratus.k141_722599                          8865 35 -     20410 c--------caaaatattagtct-c----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    13059 35 +     15221 c--------caaaatattagtct-c----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        8966 35 +     19930 c--------caaaatattagtct-c----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       5395 35 -     19997 c--------caaaatattagtct-c----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            45516 35 -     60166 c--------caaaatatgagtct-c----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        12988 35 -     27529 c--------caaaatattagtct-c----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     12929 35 -     18194 c--------caaaatattagtct-c----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           6662 35 -     21137 c--------caaaatattagtct-c----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    5365 35 -     10723 c--------caaaatattagtct-c----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         4517 35 +      9834 c--------caaaatattagtct-c----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        22833 35 +     32220 c--------caaaatattagtct-c----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5936932 35 +   6242583 c--------caaaatattagtct-c----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        6181 35 +     20839 c--------caaaatatgagtct-c----------c-----------------------atg----------------a--a--ag----------------aaaccagg---c--------------ac
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2154198 44 +   4065304 c--------a--------------a----------a-aata--t--a-g-a-ccaaatggaa---g------------a--a--aa----------------aaat-------c-c-cccaaacc-c-ac
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     7855 44 -     10553 c--------a--------------a----------a-aata--tt-a-g-a-ccaaatggaa----------------a--a--aa----------------aaat-------c-c-cccaaatc-c-ac
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4849390 45 -   5085361 c--------a--------------a----------a-aatac-t--atg----ctaa--gtg----------------a--a--aga-c-a----------ctaag-------ttcaa--aaata-t-ac
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   9954 45 +     50397 c--------aaaaatattaggct-a----------a-----------------------gtg----------------a--a--aa----------------aaaaaaag---cataa--aaa-g-ccac
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             10009 45 +     24756 c--------aaaaatattaggct-a----------a-----------------------gtg----------------a--a--aa----------------aaaaaaag---cataa--aaa-g-ccac
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5370854 24 -   5488506 c--------a--------------a----------a-aata--tt-at--a--ctaa--ctg----------------a--a--gg--------------------------------------------
i Vicugna_pacos.KN270157.1                               C 0 I 9
s Vulpes_lagopus.VulLag_flattened_line_30954                  9761 44 -     43706 c--------a--------------a----------a-aatag-t--atg----ctaa---tg----------------a--a--agaa----g--------ccaaa-------ctcaa--aaata-t-ac
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          4112 61 +     86975 a--------a--------------a----------a-aatac-tg-atgga-actaa--ggg----------------a--a--agaactaagtggaagaactaag-------ttcaa--aaata-t-ac
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Saguinus_geoffroyi.k141_1413670                            12092  0 -     13588 C
e Chiropotes_albinasus.k141_2813271                           8451 841 +     11226 I
e Cebus_unicolor.k141_219506                                 14903  0 -     16904 I
e Cebus_olivaceus.k141_1000828                                1853 231 -      2944 I
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Mus_pahari.LT608297.1                                   31352818  0 -  89631738 C
e Mus_spretus.CM004101.1                                  90750234  0 - 130317789 C
e Mus_musculus.chr8                                       87648156  0 - 129401213 C
e Mus_caroli.LT608237.1                                   84359172  0 - 120012414 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Xerus_inauris.XerIna_scaffold_48378                        22715  0 -     24430 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   52652  8 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Spermophilus_dauricus.KZ294078.1                         1951468 299 -   3870691 I
e Sorex_araneus.JH798187.1                                13649746  0 -  18376816 C
e Sigmodon_hispidus.SigHis_scaffold_60841                    11304  0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152480  8 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rattus_norvegicus.chr16                                 53568239  0 +  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Psammomys_obesus.NESX01036370.1                             8401  0 -     21651 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823  1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18191985  0 -  18517816 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Pan_paniscus.KQ411613.1                                    41837 195 +     80009 I
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7577 1418 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    77382  0 +    102263 C
e Ondatra_zibethicus.OndZib_scaffold_46174                   22267 24 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016  1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456  1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390  1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692  1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           5520  1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686  0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11258701  7 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12180532  2 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 30759  0 +    140813 C
e Marmota_marmota.CZRN01000018.1                          33100580 298 -  40650429 I
e Manis_pentadactyla.KN006162.1                              50341  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352  0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Ictidomys_tridecemlineatus.JH393364.1                    7518272 302 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447  1 -  14770903 I
e Ellobius_talpinus.LOJH01109367.1                            3704  7 -      6299 I
e Ellobius_lutescens.LOEQ01008920.1                          17650  7 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089466 1162 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            62283 174 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    835315  0 +   1526836 C
e Crocidura_indochinensis.CroInd_scaffold_37019               1709  0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11665468  2 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 48141  0 +     63868 C
e Condylura_cristata.JH655891.1                           17547413  8 -  53390261 I
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    136243  0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      10117 439 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     72139 576 -     89534 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     68454  0 +     87051 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       4684 3 +     62944 AGA
s Acinonyx_jubatus.LLWD01001279.1                           826309 3 -   1699592 aaa
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9509569 3 -  29979442 ata
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             78354 3 -    347723 ata
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   12599 3 -     52922 aga
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         12542 3 -     28001 aga
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          2988 3 -     18505 aga
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           3837 3 -     12518 aga
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                              1398 3 -     27731 tca
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                1523 3 +      3134 tca
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               1658 3 -     45847 tca
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                22864 3 +     25266 tca
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           2048 3 +      2906 tca
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            16161 3 -     18578 tca
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              1548 3 +     47717 tca
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             1678 3 -      3544 tca
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             12898 3 +     50774 tca
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184086 3 +    412891 aca
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  13519 3 -     33861 aga
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            13539 3 -     34016 aga
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4295936 3 -   5030052 aga
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             13541 3 -     34685 aga
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               26662 3 -     47192 aga
i Aotus_vociferans.k141_344750                           C 0 C 0
s Arctocebus_calabarensis.k141_2318572                        9754 3 +     14667 cta
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3498 3 +     43469 aca
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  52274 3 -     92717 aca
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              52903 3 +     85213 aca
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             3279 3 -     10423 aga
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             22780 3 +     31915 aga
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            3249 3 +      5267 aga
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23588463 3 - 189096842 AGA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              9993 3 -     12001 aga
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10001400 3 -  17673402 atg
i Camelus_bactrianus.KN276810.1                          I 9 C 0
s Camelus_dromedarius.KN272107.1                           2333858 3 -   7040546 atg
i Camelus_dromedarius.KN272107.1                         I 9 C 0
s Camelus_ferus.KB017975.1                                  402140 3 -   1652518 atg
i Camelus_ferus.KB017975.1                               I 9 C 0
s CanFam4.chr16                                           17798189 3 -  60362399 aca
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184246 3 -    185531 aca
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9033632 3 -   9314153 aca
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17957897 3 -  59632846 aca
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18499409 3 +  63665305 aca
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           154564 3 -    496798 TTT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                3860 3 -     11696 ata
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     92008 3 +    217609 ata
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          7903 3 -     11392 aga
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               4001 3 -      7577 aga
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         4074 3 +     31688 ttt
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12230449 3 +  27778364 ata
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1476 3 -     25243 ata
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4473554 3 +   4669795 AGA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        12103 3 -     19203 aga
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           6525 3 +      8260 aga
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           6751 3 +     27781 aga
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         6909 3 -     20310 aga
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           9888 3 +     29689 aga
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            4319 3 +      9989 aaa
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          12567 3 -     27936 aga
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            1444 3 -     17152 aga
i Cercopithecus_lowei.k141_1854285                       C 0 I 6
s Cercopithecus_albogularis.ctg5                                38814971 3 +  39242232 aga
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21220673 3 -  21565898 aga
i Cercopithecus_mona.ctg39                               C 0 I 6
s Cercopithecus_neglectus.k141_2526306                       37791 3 -     53127 aga
i Cercopithecus_neglectus.k141_2526306                   C 0 I 6
s Cercopithecus_nictitans.k141_3278028                        5051 3 +      7159 aga
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       12594 3 -     27947 aga
i Cercopithecus_petaurista.k141_807961                   C 0 I 6
s Cercopithecus_pogonias.k141_822820                         12567 3 +     17596 aga
i Cercopithecus_pogonias.k141_822820                     C 0 I 6
s Cercopithecus_roloway.k141_2567858                          1790 3 +     26000 aga
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_713168             164 3 -      2554 ata
i Chaetophractus_vellerosus.ChaVel_scaffold_713168       C 0 C 0
s Cheirogaleus_major.k141_333249                             19683 3 -     52598 ata
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           15034 3 +     57038 gta
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chlorocebus_aethiops.ctg25                              18426540 3 -  18827391 aga
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       12977 3 -     50209 aga
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135419977 3 + 135778131 AGA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 16875 3 +     19366 ata
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            171975 3 +    839153 ata
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_484642                111 3 +      4343 aaa
i Chrysochloris_asiatica.ChrAsi_scaffold_484642          C 0 I 414
s Colobus_angolensis.KN981557.1                            1908492 3 +   2368649 agA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199948168 3 + 200372422 cga
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              35030 3 +     84244 aga
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          13339 3 -     20389 aga
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 23
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27486 3 -     87169 ata
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12535899 3 -  12879189 ata
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8628876 3 +  20541912 acg
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672299 3 +   1390856 ata
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    5052 3 +    198055 ata
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Echinops_telfairi.JH980293.1                            48778579 3 + 111700974 Gaa
i Echinops_telfairi.JH980293.1                           C 0 I 370
s Eidolon_helvum.KE759718.1                                   9529 3 +     11740 aca
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Enhydra_lutris.KZ291758.1                               16328322 3 -  41312741 ata
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1282361 3 +   4378816 ata
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18530182 3 -  39960074 ata
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               32197 3 +    498745 ata
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21203148 3 -  21539334 aga
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              12379 3 -     14127 ata
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                5077 3 -     16928 ata
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              14107 3 -     25546 ata
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            11304 3 +     26330 ata
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 12544 3 +     23973 ata
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                11304 3 +     75513 ata
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  9246 3 +     97555 ata
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            12175 3 +     26496 ata
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  2779 3 -     17153 ata
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              12355 3 +    111500 ata
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20236178 3 + 206538554 aaa
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195021 3 + 205367284 aaa
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  8535 3 -     36744 aaa
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     424705 3 -    453645 cta
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             2412 3 +     11339 cta
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1959596                            6220 3 +      6795 cta
i Galagoides_demidoff.k141_1959596                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_197845               2623 3 -      3123 ata
i Galeopterus_variegatus.GalVar_scaffold_197845          C 0 C 0
s Gorilla_beringei.k141_3596273                              13936 3 -     32273 aga
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186336084 3 + 186649187 aga
i Gorilla_gorilla.LT578341.1                             I 35 C 0
s Hapalemur_alaotrensis.k141_170648                           5434 3 -     19426 ata
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             10583 3 -     15286 ata
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             12222 3 +     18253 ata
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         12323 3 -     41752 ata
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         12161 3 -     16460 ata
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               241323 3 +    327341 ata
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_403422                 631 3 -       893 aca
i Heterohyrax_brucei.HetBruBak_scaffold_403422           C 0 I 37
s Hipposideros_armiger.JXIK01000431.1                       110801 3 +   1711038 ata
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               42230 3 +     43066 ata
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    432749 3 +    630532 aga
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  43462 3 +     55795 aca
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_232023                                 515 3 -     12752 aga
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                                559 3 +     14092 aga
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189541342 3 - 191637585 aga
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3334236 3 -  11177569 aga
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_3655594                                   21126 3 +     31101 ata
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15522666 3 -  30322482 ata
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        5603 3 +     64341 aga
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           2664 3 +      4941 aga
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        5532 3 +     35603 aaa
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    27035 3 +     38576 aga
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         23732 3 +     66356 aga
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          9574 3 -     23766 ata
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             27640 3 +     45836 ata
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                           165 3 +     25010 ata
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      25576 3 +     54090 ata
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3041859 3 +   3914936 ata
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     4531 3 -     14121 ata
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1435101 3 +   1826925 aga
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            4180 3 +     11245 cta
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1003019 3 +   6120653 cta
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4215988 3 -  43346337 aaa
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17954137 3 -  59628241 aca
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               4916 3 +     40492 aga
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59674178 3 +  60120075 aga
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 10672 3 -     26193 aga
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            78476 3 -    114318 aga
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  4175 3 -     23192 aga
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                13636 3 -     29190 aga
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  22203 3 +     37952 aga
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186837291 3 + 187317192 AGA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25455853 3 -  25927173 AGA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  78052 3 +     89720 aga
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 5049 3 +     20474 aga
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   4850 3 -     14993 aga
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  327721 3 -    668171 aga
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 3161 3 -     24072 aga
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               23790 3 -     45290 aga
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 89622 3 +     94391 aca
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23935374 3 -  24302211 aga
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               349506 3 +    752769 aga
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        13615 3 -    207569 ata
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 T 4273
s Mellivora_capensis.MelCap_flattened_line_69365              9039 3 +     13704 ata
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mico_argentatus.k141_1239457                                3825 3 -      7380 aga
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               2891 3 +     18990 aga
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      3830 3 -      7356 aga
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18290078 3 -  93316391 ata
i Microcebus_murinus.CM007674.1                          I 23 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    18429 3 -    145209 aaa
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 373
s Micronycteris_hirsuta.MicHir_scaffold_52381                14406 3 -     19307 aca
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miopithecus_ogouensis.k141_534055                           7097 3 -     28506 aga
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         4727 3 -      8324 ata
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      7646 3 -     37649 ata
i Mirza_zaza.k141_952172                                 I 23 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140323 3 -    366855 gca
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   34435 3 +     37127 ata
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Mustela_putorius.JH418006.1                               300216 3 -  14710649 ata
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187803 3 +    196477 ata
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nasalis_larvatus.k141_413338                               13093 3 +     21681 aga
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20305985 3 +  31847680 ata
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9148395 3 -   9404916 aca
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102578213 3 - 196305487 CTA
i Nycticebus_bengalensis.LG01                            I 274 C 0
s Nycticebus_coucang.k141_5327727                             5920 2 +      8486 CT-
i Nycticebus_coucang.k141_5327727                        I 295 N 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105748634 3 + 199412804 CTA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 267 C 0
s Ochotona_princeps.JH802162.1                             1361595 3 +   3988456 aaa
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              505665 3 -   2017862 ata
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67145376 3 + 174332312 ata
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       461359 3 -    559221 aca
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         2247 3 +      8798 cta
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             694412 3 -   1103335 cta
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    42032 3 +     80009 AGA
i Pan_paniscus.KQ411613.1                                I 195 C 0
s Pan_troglodytes.NBAG03001836.1                             27957 3 +     51860 AGA
i Pan_troglodytes.NBAG03001836.1                         C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  150188 3 +    230217 aaa
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                263393 3 +  18783137 aaa
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4720031 3 -   8748460 aaa
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183441128 3 + 183742232 AGA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             4822 3 +     20448 aga
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20561630 3 +  20919399 aga
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   3566 3 +     41871 aga
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     6851 3 +     27711 aga
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  6931 3 +      9205 aga
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11651 3 -     78924 ata
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            8394 3 +     13100 cta
i Perodicticus_ibeanus.k141_855320                       C 0 I 11
s Perodicticus_potto.k141_1092580                             6770 3 +     25941 cta
i Perodicticus_potto.k141_1092580                        C 0 I 11
s Piliocolobus_badius.k141_1234363                           41590 3 +     62158 aga
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        36321 3 +     89929 aga
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            37737 3 +     51399 aga
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14293975 3 -  14605196 AGA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189129064 3 + 189387572 AGG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9568672 3 +   9816681 agg
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               71261 3 -     81375 aga
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              3081 3 +     19060 aga
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 11631 3 -     22811 aca
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2595344 3 -   4620579 ata
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     989328 3 +   2598838 ata
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          27638 3 +     38485 ata
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             3798 3 +      4256 ata
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          25151 3 +     35766 ata
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           3333 3 -     24134 ata
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        27155 3 -     67325 ata
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           3391 3 -      6182 ata
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            13703 3 -     21811 aca
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39238 3 +     42204 ata
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22975785 3 +  28871421 aca
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1358871 3 +   4952924 aca
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20273307 3 -  38429054 aaa
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             13092 3 -     91421 aga
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7607218 3 +   7812017 aga
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             13066 3 -     72585 aga
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             4773 3 -     11128 aga
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91234129 3 - 195417433 AGA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7669778 3 +   7961872 aga
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                86803 3 -     96226 aca
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               5917 3 -      8359 aga
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_imperator.k141_717981                              5860 3 -      6207 aga
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               11587 3 +     13640 aga
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               6449 3 +      8564 aga
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209466731 3 + 209938924 aga
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 5937 3 -      9399 aca
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119949301 3 - 121099817 AGA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       21757 3 +     46362 aga
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               21852 3 +     45824 aga
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             38480 3 -     64574 aga
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               1486 3 -     23631 aga
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 21745 3 -     61129 aga
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          17598 3 -     19888 aga
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      24801 3 +     39453 aga
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            5327 3 +     27826 aga
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             4847 3 -     19483 aga
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      4909 3 +      7198 aga
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         13169 3 +     15514 aga
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               2772 3 +   1910179 aca
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             29746 3 +     97271 aca
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 9
s Suricata_suricatta.SurSur_flattened_line_6629              17324 3 -    196729 ata
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.JH118708.1                                      34521 3 -     47482 ata
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1091384 3 -   1523678 aga
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 9620 3 +     41958 gta
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 71159 3 +    116680 ata
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      117772 3 -    156842 ata
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    386225 3 +    539355 ata
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               24686 3 +     70052 ttt
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_2029956                               4026 3 +      4644 ttt
i Tarsius_wallacei.k141_2029956                          C 0 C 0
s Theropithecus_gelada.CM009954.1                        186426494 3 + 186847797 AGA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   3719 3 +      8208 gta
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     79947 3 +    610378 aca
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          8900 3 -     20410 aga
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    13094 3 +     15221 aga
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        9001 3 +     19930 aga
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       5430 3 -     19997 aga
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            45551 3 -     60166 aga
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        13023 3 -     27529 aga
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     12964 3 -     18194 aga
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           6697 3 -     21137 aga
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    5400 3 -     10723 aga
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         4552 3 +      9834 aga
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        22868 3 +     32220 aga
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5936967 3 +   6242583 aga
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        6216 3 +     20839 aga
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2154242 3 +   4065304 cta
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     7899 3 -     10553 ata
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4849435 3 -   5085361 ata
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                   9999 3 +     50397 ata
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             10054 3 +     24756 ata
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5370887 3 -   5488506 atg
i Vicugna_pacos.KN270157.1                               I 9 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  9805 3 -     43706 aca
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          4173 3 +     86975 ata
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Sapajus_macrocephalus.k141_351809                          54316 0 -     80660 C
e Sapajus_apella.ctg103                                    5419275 0 -   5703754 C
e Saguinus_geoffroyi.k141_1413670                            12092 0 -     13588 C
e Chiropotes_albinasus.k141_2813271                           8451 841 +     11226 I
e Cebus_unicolor.k141_219506                                 14903 0 -     16904 I
e Cebus_olivaceus.k141_1000828                                1853 231 -      2944 I
e Cebus_albifrons.Contig27                                25650611 0 +  26074798 C
e Mus_pahari.LT608297.1                                   31352818 0 -  89631738 C
e Mus_spretus.CM004101.1                                  90750234 0 - 130317789 C
e Mus_musculus.chr8                                       87648156 0 - 129401213 C
e Mus_caroli.LT608237.1                                   84359172 0 - 120012414 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Xerus_inauris.XerIna_scaffold_48378                        22715 0 -     24430 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   52652 8 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937 0 +    114563 C
e Spermophilus_dauricus.KZ294078.1                         1951468 299 -   3870691 I
e Sorex_araneus.JH798187.1                                13649746 0 -  18376816 C
e Sigmodon_hispidus.SigHis_scaffold_60841                    11304 0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152480 8 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rattus_norvegicus.chr16                                 53568239 0 +  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Psammomys_obesus.NESX01036370.1                             8401 0 -     21651 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187              823 1 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813 0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18191985 0 -  18517816 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7577 1418 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    77382 0 +    102263 C
e Ondatra_zibethicus.OndZib_scaffold_46174                   22267 24 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Nannospalax_galili.AXCS01343547.1                            805 0 +       996 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33016 1 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902456 1 -   4330536 I
e Myotis_davidii.KB100139.1                                1586390 1 -   6019432 I
e Myotis_brandtii.KE162005.1                                278692 1 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           5520 1 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33363 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849686 0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11258701 7 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12180532 2 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 30759 0 +    140813 C
e Marmota_marmota.CZRN01000018.1                          33100580 298 -  40650429 I
e Manis_pentadactyla.KN006162.1                              50341 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352 0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Lasiurus_borealis.LasBor_scaffold_32767                    12872 41 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Ictidomys_tridecemlineatus.JH393364.1                    7518272 302 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      81626 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547 0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Eptesicus_fuscus.JH977646.1                              2144447 1 -  14770903 I
e Ellobius_talpinus.LOJH01109367.1                            3704 7 -      6299 I
e Ellobius_lutescens.LOEQ01008920.1                          17650 7 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089466 1162 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084 0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            62283 174 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    835315 0 +   1526836 C
e Crocidura_indochinensis.CroInd_scaffold_37019               1709 0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11665468 2 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 48141 0 +     63868 C
e Condylura_cristata.JH655891.1                           17547413 8 -  53390261 I
e Chinchilla_lanigera.JH722012.1                           1251498 0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157 0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    136243 0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      10117 439 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     72139 576 -     89534 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     68454 0 +     87051 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       4687 36 +     62944 CTG--TGTTT------CCA-TTTA--GATGC-CA-TTC-TA-----------------G-A-GA--AG---------------GC--A
s Acinonyx_jubatus.LLWD01001279.1                           826312 38 -   1699592 gcgtaggatt------tca-ttta--taag--cc-att-tt-----------------g-g-aaa-ag---------------gc--a
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9509572 38 -  29979442 gggtaggatt------cta-ttta--tatg--gc-att-ct-----------------g-g-aaa-ag---------------gc--a
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             78357 38 -    347723 gggtagaatt------ctg-ttta--tatg--cc-atc-ct-----------------g-g-aaa-ag---------------gc--a
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   12602 34 -     52922 ctg----att------cca-ttta--gatgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         12545 34 -     28001 ctg----att------cca-ttta--gatgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          2991 34 -     18505 ctg----att------cca-ttta--gatgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           3840 34 -     12518 ctg----att------cca-ttta--gatgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                              1401 38 -     27731 ctatgtgatt------cca-ttca--gatgc-cc-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                1526 38 +      3134 ctatgtgatt------cca-ttca--gatgc-cc-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               1661 38 -     45847 ctatgtgatt------cca-ttca--gatgc-cc-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                22867 38 +     25266 ctatgtgatt------cca-ttca--gatgc-cc-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           2051 38 +      2906 ctatgtgatt------cca-ttca--gatgc-cc-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            16164 38 -     18578 ctatgtgatt------cca-ttca--gatgc-cc-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              1551 38 +     47717 ctatgtgatt------cca-ttca--gatgc-cc-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             1681 38 -      3544 ctatgtgatt------cca-ttca--gatgc-cc-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             12901 38 +     50774 ctatgtgatt------cca-ttca--gatgc-cc-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184089 37 +    412891 ccatatgatt------cca-ttta--caca--cc-a-t-ca-----------------g-a-gaa-ag---------------ac--a
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  13522 38 -     33861 ctgcatgatt------cca-ttta--gatgc-ag-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            13542 38 -     34016 ctgcatgatt------cca-ttta--gatgc-ag-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4295939 38 -   5030052 ctgcatgatt------cca-ttta--gatGC-AG-TTC-TA-----------------G-A-GA--AG---------------GC--A
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             13544 38 -     34685 ctgcatgatt------cca-ttta--gatgc-ag-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               26665 38 -     47192 ctgcatgatt------cca-ttta--gatgc-ag-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Aotus_vociferans.k141_344750                           C 0 C 0
s Arctocebus_calabarensis.k141_2318572                        9757 39 +     14667 cgctatgatt------tca-ttcc--tgtgt-ca-gtc-ta-----------------g-aaga--ag---------------gc--a
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3501 37 +     43469 cggaatgatt------cca-ttta--cacg--cc-a-t-ca-----------------g-a-gaa-ag---------------ac--a
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  52277 44 -     92717 ctgcacgatt------cca-ttca--tatgc-ca-ttc-ta-gaata----------ga-a-aa--ag---------------gc--a
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              52906 44 +     85213 ctgcacgatt------cca-ttca--tatgc-ca-ttc-ta-gaata----------ga-a-aa--ag---------------gc--a
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             3282 38 -     10423 ctgtatgatt------cca-ttca--gatgc-ct-ttc-ta-----------------g-a-ga--gg---------------gc--c
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             22783 38 +     31915 ctgtatgatt------cca-ttca--ggtgc-ct-ttc-ta-----------------g-a-ga--ag---------------gc--c
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            3252 38 +      5267 ctgtatgatt------cca-ttca--gatgc-ct-ttc-ta-----------------g-a-ga--gg---------------gc--c
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23588466 38 - 189096842 CTGTATGATT------CCA-TTCA--GATGC-CT-TTC-TA-----------------G-A-GA--GG---------------GC--C
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                              9996 38 -     12001 ctgtatgatt------cca-ttca--gatgc-ct-ttc-ta-----------------g-a-ga--gg---------------gc--c
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10001403 38 -  17673402 ctatatgatt------cca-ttta--tatg--ct-gtt-ct-----------------g-g-gaa-ag---------------gc--a
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2333861 38 -   7040546 ctatatgatt------cca-ttta--tatg--ct-gtt-ct-----------------g-g-gaa-ag---------------gc--a
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  402143 38 -   1652518 ctatatgatt------cca-ttta--tatg--ct-gtt-ct-----------------g-g-gaa-ag---------------gc--a
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17798192 38 -  60362399 ggataggatt------cca-tcta--tatg--cc-att-ct-----------------g-a-aaa-ag---------------gc--a
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184249 38 -    185531 ggataggatt------cca-tcta--tatg--cc-att-ct-----------------g-a-aaa-ag---------------gc--a
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9033635 38 -   9314153 ggataggatt------cca-tcta--tatg--cc-att-ct-----------------g-a-aaa-ag---------------gc--a
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17957900 38 -  59632846 ggataggatt------cca-tcta--tatg--cc-att-ct-----------------g-a-aaa-ag---------------gc--a
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18499412 38 +  63665305 ggataggatt------cca-tcta--tatg--cc-att-ct-----------------g-a-aaa-ag---------------gc--a
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           154567 39 -    496798 ctgcatgatt------cta-ttta--tatgc-cA-TTC-TA-----------------GAA-AA--AG---------------GT--A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                3863 37 -     11696 ccgtgtgatt------cca-ttta--caca--cc-a-t-ca-----------------g-a-gaa-ag---------------at--a
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     92011 53 +    217609 ctgtatgatt------cca-ttta--tata--cc-ttt-ct-----------------c-g-aaa-aggcaataattagaacaac--a
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          7906 38 -     11392 ctgtatgatt------cca-ttca--gatgc-ct-ttc-ta-----------------g-a-ga--gg---------------gc--c
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               4004 38 -      7577 ctgtatgatt------cca-ttca--gatgc-ct-ttc-ta-----------------g-a-ga--gg---------------gc--c
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         4077 39 +     31688 ctgcatgatt------cta-ttta--tatgc-ca-ttc-ta-----------------gaa-aa--ag---------------gt--a
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12230452 38 +  27778364 ctgttagatt------cca-gtta--tacg--cc-att-ct-----------------g-g-aaa-ag---------------gc--a
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1479 38 -     25243 ctgttagatt------cca-ttta--tacg--cc-att-ct-----------------g-g-aaa-ag---------------gc--a
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4473557 34 +   4669795 CTG----ATT------CCA-TTTA--GATGC-CA-TTC-TA-----------------G-A-GA--AG---------------GC--A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        12106 34 -     19203 ctg----att------cca-ttta--gatgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           6528 34 +      8260 ctg----att------cca-ttta--gatgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           6754 34 +     27781 ctg----att------cca-ttta--gatgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         6912 34 -     20310 ctg----att------cca-ttta--gatgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           9891 34 +     29689 ctg----att------cca-ttta--gatgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            4322 34 +      9989 ctg----att------cca-ttta--gatgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          12570 34 -     27936 ctg----att------cca-ttta--gatgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            1453 17 -     17152 ------------------------------c-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Cercopithecus_lowei.k141_1854285                       I 6 C 0
s Cercopithecus_albogularis.ctg5                                38814974 34 +  39242232 ctg----att------cca-ttta--gatgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21220682 17 -  21565898 ------------------------------c-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Cercopithecus_mona.ctg39                               I 6 C 0
s Cercopithecus_neglectus.k141_2526306                       37800 17 -     53127 ------------------------------c-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Cercopithecus_neglectus.k141_2526306                   I 6 C 0
s Cercopithecus_nictitans.k141_3278028                        5054 34 +      7159 ctg----att------cca-ttta--gatgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       12603 17 -     27947 ------------------------------c-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Cercopithecus_petaurista.k141_807961                   I 6 C 0
s Cercopithecus_pogonias.k141_822820                         12576 17 +     17596 ------------------------------c-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Cercopithecus_pogonias.k141_822820                     I 6 C 0
s Cercopithecus_roloway.k141_2567858                          1793 34 +     26000 ctg----att------cca-ttta--gatgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_713168             167 28 -      2554 ctatactatt------cca-ttta--tgtg--ac-atc-ct-----------------------------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_713168       C 0 I 9
s Cheirogaleus_major.k141_333249                             19686 44 -     52598 ctgcatgatt------cca-ttca--tatgc-ca-ttc-ta-taata----------ga-a-aa--ag---------------gc--a
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           15037 44 +     57038 ctgcatgatt------cca-ttca--tatgc-ca-ttc-ta-taata----------ga-a-aa--ag---------------gc--a
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chlorocebus_aethiops.ctg25                              18426543 34 -  18827391 ctg----att------ccg-ttta--gatgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       12980 34 -     50209 ctg----att------cca-ttta--gatgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135419980 34 + 135778131 CTG----ATT------CCA-TTTA--GATGC-CA-TTC-TA-----------------G-A-GA--AG---------------GC--A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 16878 28 +     19366 ctgtatgatt------cca-ttta--tgtg--ac-atc-ct-----------------------------------------------
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 I 10
s Choloepus_hoffmanni.KN194906.1                            171978 28 +    839153 ctgtatgatt------cca-ttta--tgtg--ac-atc-ct-----------------------------------------------
i Choloepus_hoffmanni.KN194906.1                         C 0 I 10
s Chrysochloris_asiatica.ChrAsi_scaffold_484642                528 15 +      4343 ------------------a-tttg--tg----cccatt-cc-----------------------------------------------
i Chrysochloris_asiatica.ChrAsi_scaffold_484642          I 414 I 875
s Colobus_angolensis.KN981557.1                            1908495 33 +   2368649 CTG----ATT------CCA-TTTA---ATGC-CA-TTC-TA-----------------G-A-GA--AG---------------GC--A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199948171 33 + 200372422 ctg----att------cca-ttta---atgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              35033 33 +     84244 ctg----att------cca-ttta---atgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039            535 37 +     23735 ccatattata------tca-ctta--tatg--ga-a-a-at-----------------c-t-aaa-ga---------------ac--a
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      I 48 I 563
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27489 38 -     87169 gggtatgatt------cca-ttta--catg--cc-att-ct-----------------g-g-aaa-ag---------------gc--a
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12535902 44 -  12879189 ctgtatgatt------cca-ttca--tatgc-cc-ttc-ca-taata----------ga-a-aa--ag---------------ga--a
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8628879 37 +  20541912 tggtaggatt------cca-tcta--caca--cc-a-t-ca-----------------g-a-gaa-ag---------------ac--a
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672302 38 +   1390856 ctgttagatt------cca-ttta--taca--cc-att-ct-----------------g-g-aaa-ag---------------gc--a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    5055 38 +    198055 ctgttagatt------cca-ttta--tacg--cc-att-ct-----------------g-g-aaa-ag---------------gc--a
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Echinops_telfairi.JH980293.1                            48778952 15 + 111700974 ------------------a-ttgg--ca----ttcatc-cc-----------------------------------------------
i Echinops_telfairi.JH980293.1                           I 370 I 677
s Eidolon_helvum.KE759718.1                                   9532 38 +     11740 gtgtatgatt------cca-ttta--tatg--cc-att-ct-----------------g-g-aaa-ag---------------gc--a
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Enhydra_lutris.KZ291758.1                               16328325 38 -  41312741 gggtaggatt------cta-ttta--tatg--cc-att-ct-----------------g-g-aaa-gg---------------gc--a
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144448 33 -  14770903 -----tgatt------cca-ttta--cgcg--cc-att-ca-----------------g-a-aaa-ag---------------ac--a
i Eptesicus_fuscus.JH977646.1                            I 1 C 0
s Equus_asinus.JREZ01000139.1                              1282364 38 +   4378816 ctgttagatc------cca-ttta--tatg--cc-att-ct-----------------g-g-aaa-ag---------------gc--a
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18530185 38 -  39960074 ctgttagatc------cca-ttta--tatg--cc-att-ct-----------------g-g-aaa-ag---------------gc--a
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               32200 38 +    498745 ctgttagatc------cca-ttta--tatg--cc-att-ct-----------------g-g-aaa-ag---------------gc--a
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21203151 34 -  21539334 ctg----att------cca-ttta--gatgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              12382 44 -     14127 cagcatgatt------cca-ttca--tatgc-ca-ttc-ta-taata----------ga-a-aa--ag---------------gc--a
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                5080 44 -     16928 cagcatgatt------cca-ttca--tatgc-ca-ttc-ta-taata----------ga-a-aa--ag---------------gc--a
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              14110 43 -     25546 cagcgtgatt------cca-ttca---atgc-ca-ttc-ta-taata----------ga-a-aa--ag---------------gc--a
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            11307 44 +     26330 caacatgatt------cca-ttca--tatgc-ca-ttc-ta-taata----------ga-a-aa--ag---------------gt--a
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 12547 44 +     23973 cagcacgatt------cca-ttca--tatgc-ca-ttc-ta-taata----------ga-a-aa--ag---------------gc--a
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                11307 44 +     75513 caacatgatt------cca-ttca--tatgc-ca-ttc-ta-taata----------ga-a-aa--ag---------------gt--a
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  9249 44 +     97555 cagcatgatt------cca-ttca--tatgc-ca-ttc-ta-taata----------ga-a-aa--ag---------------gc--a
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            12178 43 +     26496 cagcatgatt------cca-ttca---atgc-ca-ttc-ta-taata----------ga-a-aa--ag---------------gc--a
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  2782 44 -     17153 cagcatgatt------cca-ttca--tatgc-ca-ttc-ta-taata----------ga-a-aa--ag---------------gc--a
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              12358 44 +    111500 cagcatgatt------cca-ttca--tatgc-ca-ttc-tg-taata----------ga-a-aa--ag---------------gc--a
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20236181 38 + 206538554 gcgtatgatt------tca-ttta--taag--cc-att-tt-----------------g-g-aaa-ag---------------gc--a
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195024 38 + 205367284 gcgtatgatt------tca-ttta--taag--cc-att-tt-----------------g-g-aaa-ag---------------gc--a
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  8538 38 -     36744 gcgtatgatt------tca-ttta--taag--cc-att-tt-----------------g-g-aaa-ag---------------gc--a
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     424708 39 -    453645 ctgtatggtt------tca-ttca--catgt-ca-ttc-ta-----------------g-aaaa--ag---------------gc--a
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             2415 39 +     11339 ctgtatgatt------tca-ttca--catgt-ca-ttc-ta-----------------g-aaaa--ag---------------gc--a
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1959596                            6223 39 +      6795 ctgtatgatt------tca-ttca--catgt-ca-ttc-ta-----------------g-aaaa--ag---------------gc--a
i Galagoides_demidoff.k141_1959596                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_197845               2626 38 -      3123 ctgtgtgatt------cca-atta--tacg--ca-ttc-ta-----------------g-a-aa-cag---------------ga--g
i Galeopterus_variegatus.GalVar_scaffold_197845          C 0 C 0
s Gorilla_beringei.k141_3596273                              13939 36 -     32273 ctg--tgttt------cca-ttta--gatgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186336087 36 + 186649187 ctg--tgttt------cca-ttta--gatgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           5437 44 -     19426 ctgcatgatt------cca-ttca--tatgc-ca-ttc-ta-taata----------ga-a-aa--ag---------------gc--a
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             10586 44 -     15286 ctgcatgatt------cca-ttca--tatgc-ca-ttc-ta-taata----------ga-a-aa--ag---------------gc--a
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             12225 44 +     18253 ctgcatgatt------cca-ttca--tatgc-ca-ttc-ta-taata----------ga-a-aa--ag---------------gc--a
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         12326 44 -     41752 ctgcatgatt------cca-ttca--tatgc-ca-ttc-ta-taata----------ga-a-aa--ag---------------gc--a
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         12164 44 -     16460 ctgcatgatt------cca-ttca--tatgc-ca-ttc-ta-taata----------ga-a-aa--ag---------------gc--a
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               241326 38 +    327341 gggtatgatt------cca-ttta--tatg--cc-att-ct-----------------g-g-aaa-ag---------------gt--g
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_344035                 876 28 -      1135 cggtgtgatt------cca-ctcacacg----ac-aca-tg-----------------------------------------------
i Heterohyrax_brucei.HetBruBak_scaffold_344035           I 32 n 37
s Hipposideros_armiger.JXIK01000431.1                       110804 32 +   1711038 ttgtgtgatt------ctg-ttta--tatg--cc-a-ttct-----------------g-g-aa------------------------
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 1
s Hipposideros_galeritus.HipGal_scaffold_29171               42233 32 +     43066 ctgtgtgatg------ctg-ttta--tatg--cc-a-ttct-----------------g-g-aa------------------------
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 I 1
s Hoolock_leuconedys.ctg274                                    432752 38 +    630532 ctgtctgatt------cca-ttta--gacgc-cg-ttc-ta-----------------g-a-aa--ag---------------gc--a
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  43465 38 +     55795 agatatgatt------cta-ttta--catg--cc-att-ct-----------------g-g-aaa-ag---------------gc--a
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_232023                                 518 38 -     12752 gtgtctgact------cca-ttta--gatgc-ca-ttc-ta-----------------g-a-ag--ag---------------gc--a
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                                562 38 +     14092 gtgtctgact------cca-ttta--gatgc-ca-ttc-ta-----------------g-a-aa--ag---------------gc--a
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189541345 38 - 191637585 gtgtctgact------cca-ttta--gatgc-ca-ttc-ta-----------------g-a-aa--ag---------------gc--a
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3334239 38 -  11177569 gtgtctgact------cca-ttta--gatgc-ca-ttc-ta-----------------g-a-aa--ag---------------gc--a
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_3655594                                   21129 44 +     31101 ctgcatgatt------cca-ttca--tatgc-ca-ttc-ga-taata----------ga-a-aa--ag---------------tc--a
i Indri_indri.k141_3655594                               C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_50988                    12322 33 +     29960 -----tgatt------cca-ttta--cacg--cc-att-ca-----------------g-a-aaa-ag---------------ac--a
i Lasiurus_borealis.LasBor_scaffold_50988                I 170 C 0
s Lemur_catta.scaffold_24                                 15522669 44 -  30322482 ctgcatgatt------cca-ttca--tatgc-ca-ttc-ta-taata----------ga-a-aa--ag---------------gc--a
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        5606 38 +     64341 ctctatgatc------cca-ttca--gatgc-ct-ttc-ta-----------------g-a-ga--ag---------------gc--c
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           2667 38 +      4941 ctctatgatc------cca-ttca--gatgc-ct-ttc-ta-----------------g-a-ga--ag---------------gc--c
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        5535 38 +     35603 ctgtatgatc------cca-ttca--gatgc-ct-ttc-ta-----------------g-a-ga--ag---------------gc--c
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    27038 38 +     38576 ctgtatgatt------cca-ttca--gatgc-cc-ttc-ta-----------------g-a-ga--ag---------------gc--c
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         23735 38 +     66356 ctgtatgatt------cca-ttca--gatgc-cc-ttc-ta-----------------g-a-ga--ag---------------gc--c
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          9577 44 -     23766 ctgcatgatt------cca-ttca--tgtgc-ca-ttc-ta-taata----------ga-a-aa--ag---------------gc--a
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             27643 44 +     45836 ctgcatgatt------cca-ttca--tgtgc-ca-ttc-ta-taata----------ga-a-aa--ag---------------gc--a
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                           168 44 +     25010 ctgcacgatt------cca-ttca--tgtgc-ca-ttc-ta-taata----------ga-a-aa--ag---------------gc--a
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      25579 44 +     54090 ctgcatgatt------cca-ttca--tgtgc-ca-ttc-ta-taata----------ga-a-aa--ag---------------gc--a
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3041862 38 +   3914936 gaataggatt------cta-ttta--tatg--cc-att-ct-----------------g-g-aaa-ag---------------gc--a
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     4534 39 -     14121 ctgtgtgatc------cca-ttta--tata-tta-ttc-ta-----------------g-a-aaa-ag---------------gc--a
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1435104 34 +   1826925 ctg----att------cca-ttta--gatgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            4183 27 +     11245 ctctatgatt------tca-ttta--cgtgT-CA-TTT--------------------------------------------------
i Loris_lydekkerianus.k141_2539221                       C 0 I 50
s Loris_tardigradus.ctg83                                  1003022 27 +   6120653 ctctatgatt------tca-ttta--cgtgT-CA-TTT--------------------------------------------------
i Loris_tardigradus.ctg83                                C 0 I 50
s Loxodonta_africana.GL010049.1                            4215991 26 -  43346337 ctgtatgact------cta-ttta--tg----ac-ata-ct-----------------------------------------------
i Loxodonta_africana.GL010049.1                          C 0 I 9
s Lycaon_pictus.CM007581.1                                17954140 38 -  59628241 ggataggatt------cca-tcta--tatg--cc-att-ct-----------------g-a-gaa-ag---------------gc--a
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               4919 34 +     40492 ctg----agt------cca-ttta--gatgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59674181 34 +  60120075 ctg----agt------cca-ttta--gatgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 10675 34 -     26193 ctg----agt------cca-ttta--gatgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            78479 34 -    114318 ctg----agt------cca-ttta--gatgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  4178 34 -     23192 ctg----agt------cca-ttta--gatgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                13639 34 -     29190 ctg----agt------cca-ttta--gatgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  22206 34 +     37952 ctg----agt------cca-ttta--gatgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186837294 34 + 187317192 CTG----AGT------CCA-CTTA--GATGC-CA-TTC-TA-----------------G-A-GA--AG---------------GC--A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25455856 34 -  25927173 CTG----AGT------CCA-TTTA--GATGC-CA-TTC-TA-----------------G-A-GA--AG---------------GC--A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  78055 34 +     89720 ctg----agt------cca-ttta--gatgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 5052 34 +     20474 ctg----agt------cca-ttta--gatgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   4853 34 -     14993 ctg----agt------cca-ttta--gatgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  327724 34 -    668171 ctg----agt------cca-ttta--gatgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 3164 34 -     24072 ctg----agt------cca-ttta--gatgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               23793 34 -     45290 ctg----agt------cca-ttta--gatgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 89625 37 +     94391 gtgtatgatt------cca-ttta--tatg--cc-at--ct-----------------g-g-aaa-aa---------------gc--a
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23935377 34 -  24302211 ctg----att------cca-ttta--gatgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               349509 34 +    752769 ctg----att------cca-ctta--gatgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         9345 37 -    207569 ctgtaggatt------c-a-ttta--tatg--tc-a-ttct-----------------g-g-aaa-aa---------------ga--a
i Megaderma_lyra.MegLyr_scaffold_4542                    T 4273 I 2
s Mellivora_capensis.MelCap_flattened_line_69365              9042 38 +     13704 ggataggatt------cta-ttta--tatg--cc-att-ct-----------------g-g-aaa-gg---------------gc--a
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mico_argentatus.k141_1239457                                3828 37 -      7380 ctatatgatt------cca-ttca--gatgc-ct-ttc-ta-----------------g-a-ga--gg---------------gc---
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               2894 38 +     18990 ctgtatgatt------cca-ttca--gatgc-ct-ttc-ta-----------------g-a-ga--gg---------------gc--c
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      3833 38 -      7356 ctgtatgatt------cca-ttca--gatgc-ct-ttt-ta-----------------g-a-ga--gg---------------gc--c
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18290081 44 -  93316391 ctgtatggtt------cca-ttCA--TATGC-CA-CTC-TA-----------TAATAGA-A-AA--AG---------------GC--A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    18805 15 -    145209 ------------------a-ttgg--ta----ttcatc-cc-----------------------------------------------
i Microgale_talazaci.MicTal_scaffold_6613                I 373 I 635
s Micronycteris_hirsuta.MicHir_scaffold_52381                14409 37 -     19307 ccatatgatt------cca-ttga--caca--cc-a-t-ca-----------------g-a-gaa-ag---------------ac--a
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849686 26 +   8254450 ------------------a-ttta--caca--cc-att-ca-----------------g-a-aaa-ag---------------ac--a
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             33363 26 +     64694 ------------------a-ttta--caca--cc-att-ca-----------------g-a-aaa-ag---------------ac--a
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           7100 34 -     28506 ctg----att------cca-ttta--gatgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         4730 38 -      8324 gaataggatt------cta-ttta--tatg--cc-att-ct-----------------g-g-aaa-ag---------------gc--a
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      7649 20 -     37649 ctgtatggtt------cca-ttca--tat-----------------------------------------------------------
i Mirza_zaza.k141_952172                                 C 0 I 13
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140326 38 -    366855 cggtatgatt------cca-ctta--catg--cc-agt-ca-----------------g-a-gaa-ag---------------gc--a
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   34438 38 +     37127 gggtatgatt------cca-ttta--tatg--cc-att-ct-----------------g-g-aaa-ag---------------gc--c
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5521 33 +     14753 -----tgatt------cca-ttta--tgcg--cc-att-ca-----------------g-a-aaa-ag---------------ac--a
i Murina_feae.MurFea_scaffold_85699                      I 1 C 0
s Mustela_putorius.JH418006.1                               300219 38 -  14710649 gggtaggatt------cta-ttta--tatg--cc-att-cg-----------------g-a-aaa-gg---------------gc--a
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                278693 33 -  10118263 -----tgatt------cca-ttta--tgcg--cc-att-ca-----------------g-a-aaa-ag---------------ac--a
i Myotis_brandtii.KE162005.1                             I 1 C 0
s Myotis_davidii.KB100139.1                                1586391 33 -   6019432 -----tgatt------cca-ttta--cacg--cc-att-ca-----------------g-a-aaa-aa---------------aa--a
i Myotis_davidii.KB100139.1                              I 1 I 1
s Myotis_lucifugus.GL429869.1                              3902457 33 -   4330536 -----tgatt------cca-ttta--cgcg--cc-att-ca-----------------g-a-aaa-ag---------------ac--a
i Myotis_lucifugus.GL429869.1                            I 1 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        33017 33 +     33610 -----tgatt------cca-ttta--tgcg--cc-att-ca-----------------g-a-aaa-ag---------------ac--a
i Myotis_myotis.MyoMyo_scaffold_28916                    I 1 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187806 28 +    196477 ctatgtgatt------cca-ctga--tgtg--ac-atc-ct-----------------------------------------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 I 10
s Nasalis_larvatus.k141_413338                               13096 33 +     21681 ctg----att------cca-ttta---atgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20305988 38 +  31847680 gaataggatt------cta-ttta--tatg--cc-att-ct-----------------g-g-aaa-ag---------------gc--a
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9148398 38 -   9404916 ggataggatt------cca-tcta--tatg--cc-att-ct-----------------g-a-aaa-ag---------------gc--a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102578216 27 - 196305487 TTTTATGATT------TTA-TTCA--CGTGT-CA-TTT--------------------------------------------------
i Nycticebus_bengalensis.LG01                            C 0 I 47
s Nycticebus_coucang.k141_771082                                80  8 -      2667 ----------------------------tgt-ca-ttt--------------------------------------------------
i Nycticebus_coucang.k141_771082                         N 0 I 47
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105748637 27 + 199412804 TTTTATGATT------TTA-TTCA--CGTGT-CA-TTT--------------------------------------------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 47
s Ochotona_princeps.JH802162.1                             1361598 63 +   3988456 ctgtatgaggtatgagtcatttta--agta-cca-ttc-taccaaaaaaaaaaaaaaaa-a-aaa-aa---------------aa--a
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              505668 38 -   2017862 ggataggatt------cta-ttta--tatg--cc-att-ct-----------------g-g-aaa-ag---------------gc--a
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67145379 39 + 174332312 ctgtgtgatg------cca-ttta--tata-tta-ttc-ta-----------------g-a-aaa-ag---------------gc--a
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       461362 38 -    559221 ggataggatt------cca-tcta--tatg--cc-att-ct-----------------g-a-aaa-ag---------------gc--a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         2250 39 +      8798 ctgtatgatt------tca-ttct--catgt-ca-ttc-ta-----------------g-aaaa--ag---------------gc--a
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             694415 39 -   1103335 ctgtatgatt------tca-ttct--catgt-ca-ttc-ta-----------------g-aaaa--ag---------------gc--a
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    42035 36 +     80009 CTG--TGTTT------CCA-TTTA--GATGC-CA-TTC-TA-----------------C-A-GA--AG---------------GC--A
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03001836.1                             27960 36 +     51860 CTG--TGTTT------CCA-TTTA--GATGC-CA-TTC-TA-----------------G-A-GA--AG---------------GC--A
i Pan_troglodytes.NBAG03001836.1                         C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  150191 38 +    230217 gcgtgtgatt------tca-ttta--taag--cc-att-tt-----------------g-g-aaa-ag---------------gc--a
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                263396 38 +  18783137 gcgtgtgatt------tca-ttta--taag--cc-att-tt-----------------g-g-aaa-ag---------------gc--a
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4720034 38 -   8748460 gcgtgtgatt------tca-ttta--taag--cc-att-tt-----------------g-g-aaa-ag---------------gc--a
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183441131 34 + 183742232 CTG----ATT------CCA-TTTA--GATGC-CA-TTC-TA-----------------G-A-GA--AG---------------AC--A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             4825 34 +     20448 ctg----att------cca-ttta--gatgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20561633 34 +  20919399 ctg----att------cca-ttta--gatgc-ca-ttc-ta-----------------g-a-ga--ag---------------ac--a
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   3569 34 +     41871 ctg----att------cca-ttta--gatgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     6854 34 +     27711 ctg----att------cca-ttta--gatgc-ca-ttc-ta-----------------g-a-ga--ag---------------ac--a
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  6934 34 +      9205 ctg----att------cca-ttta--gatgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11654 38 -     78924 ggctatgatt------cca-ttta--tatg--cc-att-ct-----------------g-g-aaa-ag---------------gc--a
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            8408 25 +     13100 --------------------ttca--catgt-ca-gtc-ta-----------------g-aag---aa---------------gc--a
i Perodicticus_ibeanus.k141_855320                       I 11 C 0
s Perodicticus_potto.k141_1092580                             6784 25 +     25941 --------------------ttca--catgt-ca-gtc-ta-----------------g-aag---ag---------------gc--a
i Perodicticus_potto.k141_1092580                        I 11 C 0
s Piliocolobus_badius.k141_1234363                           41593 33 +     62158 ctg----att------cca-ttta---atgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        36324 33 +     89929 ctg----att------cca-ttta---atgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            37740 33 +     51399 ctg----att------cca-ttta---atgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14293978 33 -  14605196 CTG----ATT------CCA-TTTA---ATGC-CA-TTC-TA-----------------G-A-GA--AG---------------GC--A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              824 33 +     22620 -----tgatt------cca-tgta--tgtg--cc-att-ca-----------------g-a-aaa-ag---------------ac--a
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 1 C 0
s Pongo_abelii.CM009266.2                                189129067 38 + 189387572 CTGTCTGATT------GCA-TTTA--GATGC-CA-TTC-TA-----------------G-A-GA--AG---------------GC--A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9568675 38 +   9816681 ctgtctgatt------gca-ttta--gatgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               71264 33 -     81375 ctg----att------ccg-ttta---atgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              3084 33 +     19060 ctg----att------ccg-ttta---atgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 11634 28 -     22811 cggtgtgatt------cta-ctcacacg----ac-aca-tg-----------------------------------------------
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 I 9
s Prolemur_simus.MPIZ01000396.1                            2595347 44 -   4620579 ctgcatgatt------cca-ttca--tatgc-cA-TTC-TA-----------TAATAGA-A-AA--AG---------------GC--A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     989331 44 +   2598838 ctgcatgatt------cca-ttca--tatgc-cA-TTC-TA-----------TAATAGA-A-AA--AG---------------GC--A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          27641 44 +     38485 ctgcatgatt------cca-ttca--tatgc-ca-ttc-ta-taata----------ga-a-aa--ag---------------gc--a
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             3801 44 +      4256 ctgcatgatt------cca-ttca--tatgc-ca-ttc-ta-taata----------ga-a-aa--ag---------------gt--a
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          25154 44 +     35766 ctgcatgatt------cca-ttca--tatgc-ca-ttc-ta-taata----------ga-a-aa--ag---------------gt--a
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           3336 44 -     24134 ctgcatgatt------cca-ttca--tatgc-ca-ttc-ta-taata----------ga-a-aa--ag---------------gt--a
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        27158 44 -     67325 ctgcatgatt------cca-ttca--tatgc-ca-ttc-ta-taata----------ga-a-aa--ag---------------gc--a
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           3394 44 -      6182 ctgcatgatt------cca-ttca--tatgc-ca-ttc-ta-taata----------ga-a-aa--aa---------------gc--a
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            13706 38 -     21811 ctgtatgatt------cca-ctta--cacg--cc-agc-ca-----------------g-g-gaa-ag---------------ac--a
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39241 38 +     42204 gtgtaggatt------cta-ttta--tatg--cc-att-ct-----------------g-a-aaa-gg---------------gc--a
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22975788 38 +  28871421 ttgtatgatt------cca-ttta--tatg--cc-att-ct-----------------g-g-aaa-ag---------------gc--a
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1358874 38 +   4952924 ttgtatgatt------cca-ttta--tatg--cc-att-ct-----------------g-g-aaa-ag---------------gc--a
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20273310 38 -  38429054 gcgtatgatt------tca-ttta--taag--cc-att-tt-----------------g-g-aaa-ag---------------gc--a
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             13095 33 -     91421 ctg----att------cca-ttta---atgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7607221 33 +   7812017 ctg----att------cca-ttta---atgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             13069 33 -     72585 ctg----att------cca-ttta---atgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             4776 33 -     11128 ctg----att------cca-ctta---atgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91234132 33 - 195417433 CTG----ATT------CCA-TTTA---ATGC-CA-TTC-TA-----------------G-A-GA--AG---------------GC--A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7669781 33 +   7961872 ctg----att------cca-ctta---atgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                86806 38 -     96226 ttgtatgatt------cca-ttca--catg--cc-att-ct-----------------g-g-aaa-ag---------------gc--a
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               5920 38 -      8359 ctgtatgatc------cca-ttca--gatgc-ct-ttc-ta-----------------g-a-ga--ag---------------gc--c
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_geoffroyi.k141_1413670                            12092  9 -     13588 ------aatc------cca-tt------------------------------------------------------------------
i Saguinus_geoffroyi.k141_1413670                        C 0 N 0
s Saguinus_imperator.k141_717981                              5863 38 -      6207 ctgtatgatc------cca-ttca--gatgc-ct-ttc-ta-----------------g-a-ga--ag---------------gc--c
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               11590 38 +     13640 ctgtatgatc------cca-ttca--gatgc-ct-ttc-ta-----------------g-a-ga--ag---------------gc--c
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               6452 38 +      8564 ctgtatgatc------cca-ttca--gatgc-ct-ttc-ta-----------------g-a-ga--ag---------------gc--c
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209466734 38 + 209938924 ctgtatgatc------cca-ttca--gatgc-ct-ttc-ta-----------------g-a-ga--ag---------------gc--c
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 5940 38 -      9399 ctgtatgatc------cca-ttca--gatgc-ct-ttc-ta-----------------g-a-ga--ag---------------gc--c
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_161539                                 441 23 +      1573 ----------------------ca--gacac-tt-tac-aa-----------------a-a-ga--ag---------------ac--c
i Saguinus_oedipus.k141_161539                           N 0 I 1
s Saimiri_boliviensis.NW_024100920.1                     119949304 37 - 121099817 CTGTAGGATT------CCA-TTTA--GATGC-CA-TTC--A-----------------G-A-GA--AC---------------GC--A
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       21760 37 +     46362 ctgtaggatt------cca-ttta--gatgc-ca-ttc--a-----------------g-a-ga--ac---------------gc--a
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               21855 37 +     45824 ctgtaggatt------cca-ttta--gatgc-ca-ttc--a-----------------g-a-ga--ac---------------gc--a
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             38483 37 -     64574 ctgtaggatt------cca-ttta--gatgc-ca-ttc--a-----------------g-a-ga--ac---------------gc--a
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               1489 37 -     23631 ctgtaggatt------cca-ttta--gatgc-ca-ttc--a-----------------g-a-ga--ac---------------gc--a
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 21748 37 -     61129 ctgtaggatt------cca-ttta--gatgc-ca-ttc--a-----------------g-a-ga--ac---------------gc--a
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          17601 33 -     19888 ctg----att------cca-ttta---atgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      24804 33 +     39453 ctg----att------cca-ttta---atgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            5330 33 +     27826 ctg----att------cca-ttta---atgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             4850 33 -     19483 ctg----att------cca-ttta---atgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      4912 33 +      7198 ctg----att------cca-ttta---atgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         13172 33 +     15514 ctg----att------cca-ttta---atgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               2775 35 +   1910179 atgtatgatt------cca-ttta--tgta--cc-att-tg-----------------g-a-aa-ggg--------------------
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 1
s Spilogale_gracilis.SpiGra_flattened_line_13525             29758 23 +     97271 ----------------------ta--tacg--cc-att-ct-----------------g-g-aaa-ag---------------gc--a
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 9 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              17327 38 -    196729 gggcatgatt------cta-ttta--catg--cc-att-ct-----------------g-g-taa-ag---------------gc--g
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.JH118708.1                                      34524 53 -     47482 ctatatgatt------cca-ttta--tata--cc-ttt-ct-----------------g-g-aaa-agacaataattagaacaac--a
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1091387 38 -   1523678 ctgtctgatt------cca-ttta--gatgc-cg-ttc-ta-----------------g-a-aa--ag---------------gc--a
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 9623 38 +     41958 ctatatgatt------cca-ttta--caca--ct-gtt-ca-----------------g-a-aaa-ag---------------ac--a
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 71162 28 +    116680 ctgtatgatt------cca-ttga--tgtg--ac-atc-ct-----------------------------------------------
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 I 10
s Tapirus_indicus.TapInd_scaffold_9301                      117775 38 -    156842 ctattagatt------ctg-ttta--tacg--cc-ctt-ct-----------------g-g-aaa-ag---------------gc--a
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    386228 38 +    539355 ctattagatt------cta-ttta--tacg--cc-ctt-ct-----------------g-g-aaa-ag---------------gc--a
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               24689 39 +     70052 ctgcatgatt------cta-ttta--catgc-ca-ttc-ta-----------------gaa-aa--ag---------------gt--a
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_2029956                               4029 39 +      4644 ctgcatgatt------cta-ttta--catgc-ca-ttc-ta-----------------gaa-aa--aa---------------gt--a
i Tarsius_wallacei.k141_2029956                          C 0 C 0
s Theropithecus_gelada.CM009954.1                        186426497 34 + 186847797 CTG----ATT------CCA-TTTA--GATGC-CA-TTC-TA-----------------G-A-GA--AG---------------GC--A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   3722 28 +      8208 ctgtatgatt------cca-cgta--tgtg--ac-atc-ct-----------------------------------------------
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 I 9
s Tonatia_saurophila.TonSau_scaffold_294                     79950 37 +    610378 ccgtatgatt------cca-tcca--caca--cc-a-t-ca-----------------g-a-gaa-ag---------------ac--a
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          8903 33 -     20410 ctg----att------cca-ttta---atgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    13097 33 +     15221 ctg----att------cca-ttta---atgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        9004 33 +     19930 ctg----att------cca-ttta---atgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       5433 33 -     19997 ctg----att------cca-ttta---atgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            45554 33 -     60166 ctg----att------cca-ttta---atgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        13026 33 -     27529 ctg----att------cca-ttta---atgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     12967 33 -     18194 ctg----att------cca-ttta---atgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           6700 33 -     21137 ctg----att------cca-ttta---atgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    5403 33 -     10723 ctg----att------cca-ttta---atgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         4555 33 +      9834 ctg----att------cca-ttta---atgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        22871 33 +     32220 ctg----att------cca-ttta---atgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5936970 33 +   6242583 ctg----att------cca-ttta---atgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        6219 33 +     20839 ctg----att------cca-ttta---atgc-ca-ttc-ta-----------------g-a-ga--ag---------------gc--a
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2154245 40 +   4065304 ctatatggtt------cca-ttta--tata-cca-gtc-ta-----------------g-a-aaaaag---------------gc--a
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     7902 39 -     10553 ctatatggtt------cca-ttta--tata-cca-gtc-ta-----------------g-a-aaa-ag---------------gc--a
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4849438 38 -   5085361 gggtaggatt------cta-ttta--tatg--cc-att-ct-----------------g-g-aaa-ag---------------gc--a
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  10002 44 +     50397 ctgcatgatt------cca-ttca--tatgc-ca-ttc-ta-gaata----------ga-a-aa--ag---------------ac--a
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             10057 44 +     24756 ctgcatgatt------cca-ttca--tatgc-ca-ttc-ta-gaata----------ga-a-aa--ag---------------ac--a
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5370890 38 -   5488506 ctatatgatt------cca-ttta--tatg--cc-gtt-ct-----------------g-g-aaa-ag---------------gc--a
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  9808 38 -     43706 ggataggatt------cca-tcta--tatg--cc-att-ct-----------------g-a-aaa-ag---------------gc--a
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          4176 38 +     86975 ggataggatt------cta-ttta--tatg--cc-att-ct-----------------g-g-aaa-ag---------------gc--a
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Chiropotes_albinasus.k141_2813271                           8451 841 +     11226 I
e Cebus_unicolor.k141_219506                                 14903  0 -     16904 I
e Cebus_olivaceus.k141_1000828                                1853 231 -      2944 I
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Mus_pahari.LT608297.1                                   31352818  0 -  89631738 C
e Mus_spretus.CM004101.1                                  90750234  0 - 130317789 C
e Mus_musculus.chr8                                       87648156  0 - 129401213 C
e Mus_caroli.LT608237.1                                   84359172  0 - 120012414 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Xerus_inauris.XerIna_scaffold_48378                        22715  0 -     24430 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   52652  8 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Spermophilus_dauricus.KZ294078.1                         1951468 299 -   3870691 I
e Sorex_araneus.JH798187.1                                13649746  0 -  18376816 C
e Sigmodon_hispidus.SigHis_scaffold_60841                    11304  0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152480  8 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rattus_norvegicus.chr16                                 53568239  0 +  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Psammomys_obesus.NESX01036370.1                             8401  0 -     21651 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18191985  0 -  18517816 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orycteropus_afer.OryAfe_flattened_line_144387               7577 1418 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    77382  0 +    102263 C
e Ondatra_zibethicus.OndZib_scaffold_46174                   22267 24 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11258701  7 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12180532  2 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 30759  0 +    140813 C
e Marmota_marmota.CZRN01000018.1                          33100580 298 -  40650429 I
e Manis_pentadactyla.KN006162.1                              50341  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352  0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Ictidomys_tridecemlineatus.JH393364.1                    7518272 302 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Ellobius_talpinus.LOJH01109367.1                            3704  7 -      6299 I
e Ellobius_lutescens.LOEQ01008920.1                          17650  7 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089466 1162 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            62283 174 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    835315  0 +   1526836 C
e Crocidura_indochinensis.CroInd_scaffold_37019               1709  0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11665468  2 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 48141  0 +     63868 C
e Condylura_cristata.JH655891.1                           17547413  8 -  53390261 I
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    136243  0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      10117 439 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     72139 576 -     89534 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     68454  0 +     87051 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       4723 7 +     62944 ACA-CTAG
s Acinonyx_jubatus.LLWD01001279.1                           826350 7 -   1699592 aaa-ctag
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9509610 7 -  29979442 aaa-ctat
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             78395 7 -    347723 aca-ctat
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   12636 7 -     52922 aca-ctag
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         12579 7 -     28001 aca-ctag
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          3025 7 -     18505 aca-ctag
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           3874 7 -     12518 aca-ctag
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                              1439 7 -     27731 acg-ctgg
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                1564 7 +      3134 acg-ctgg
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               1699 7 -     45847 acg-ctgg
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                22905 7 +     25266 acg-ctgg
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           2089 7 +      2906 acg-ctgg
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            16202 7 -     18578 acg-ctgg
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              1589 7 +     47717 acg-ctgg
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             1719 7 -      3544 acg-ctgg
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             12939 7 +     50774 acg-ctgg
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184126 8 +    412891 aaacctaa
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  13560 7 -     33861 acg-ctag
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            13580 7 -     34016 acg-ctag
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4295977 7 -   5030052 ACG-CTAG
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             13582 7 -     34685 acg-ctag
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               26703 7 -     47192 acg-ctag
i Aotus_vociferans.k141_344750                           C 0 C 0
s Arctocebus_calabarensis.k141_2318572                        9796 7 +     14667 aaa-ctag
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3538 8 +     43469 aaacctac
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  52321 7 -     92717 aca-ctag
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              52950 7 +     85213 aca-ctag
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             3320 7 -     10423 atg-ctag
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             22821 7 +     31915 acg-ctag
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            3290 7 +      5267 acg-ctag
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23588504 7 - 189096842 ACG-CTAG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             10034 7 -     12001 acg-ctag
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10001441 7 -  17673402 atactt-a
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2333899 7 -   7040546 atactt-a
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  402181 7 -   1652518 atactt-a
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17798230 7 -  60362399 aaa-ctat
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184287 7 -    185531 aaa-ctat
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9033673 7 -   9314153 aaa-ctat
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17957938 7 -  59632846 aaa-ctat
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18499450 7 +  63665305 aaa-ctat
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           154606 7 -    496798 AAA-CTGG
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                3900 8 -     11696 aaaccgaa
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     92064 8 +    217609 acaacaaa
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          7944 7 -     11392 acg-ctag
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               4042 7 -      7577 acg-ctag
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         4116 7 +     31688 aaa-ctgg
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12230490 7 +  27778364 aaa-ctaa
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1517 7 -     25243 aaa-ctaa
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4473591 7 +   4669795 ACA-CTAG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        12140 7 -     19203 aca-ctag
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           6562 7 +      8260 aca-ctag
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           6788 7 +     27781 aca-ctag
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         6946 7 -     20310 aca-ctag
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           9925 7 +     29689 aca-ctag
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            4356 7 +      9989 aca-ctag
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          12604 7 -     27936 aca-ctag
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            1470 7 -     17152 aca-ctag
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38815008 7 +  39242232 aca-ctag
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21220699 7 -  21565898 aca-ctag
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       37817 7 -     53127 aca-ctag
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        5088 7 +      7159 aca-ctag
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       12620 7 -     27947 aca-ctag
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         12593 7 +     17596 aca-ctag
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          1827 7 +     26000 aca-ctag
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             19730 7 -     52598 aca-ctag
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           15081 7 +     57038 aca-ctag
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chlorocebus_aethiops.ctg25                              18426577 7 -  18827391 aca-ctag
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       13014 7 -     50209 aca-ctag
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135420014 7 + 135778131 ACA-CTAG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 16916 7 +     19366 aaa-ctag
i Choloepus_didactylus.ChoDid_scaffold_45914             I 10 I 10
s Choloepus_hoffmanni.KN194906.1                            172016 7 +    839153 aaa-ctag
i Choloepus_hoffmanni.KN194906.1                         I 10 I 10
s Colobus_angolensis.KN981557.1                            1908528 7 +   2368649 GCA-CTAG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199948204 7 + 200372422 gca-ctag
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              35066 7 +     84244 gca-ctag
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          13365 7 -     20389 aaa-ctaa
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 23 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27527 7 -     87169 aaa-ctag
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12535946 7 -  12879189 aaa-ctaa
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8628916 8 +  20541912 aagcctaa
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672340 7 +   1390856 aaa-ctaa
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    5093 7 +    198055 aaa-ccaa
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Echinops_telfairi.JH980293.1                            48779644 7 + 111700974 AAA-ATAT
i Echinops_telfairi.JH980293.1                           I 677 I 164
s Eidolon_helvum.KE759718.1                                   9570 7 +     11740 aaa-ctaa
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Enhydra_lutris.KZ291758.1                               16328363 7 -  41312741 aaa-ctat
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144481 7 -  14770903 aaa-ctaa
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1282402 7 +   4378816 aaa-ctaa
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18530223 7 -  39960074 aaa-ctaa
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               32238 7 +    498745 aaa-ctaa
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21203185 7 -  21539334 aca-ctag
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              12426 7 -     14127 aca-ctag
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                5124 7 -     16928 aca-ctag
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              14153 7 -     25546 aca-ctag
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            11351 7 +     26330 aca-ctag
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 12591 7 +     23973 aca-ctag
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                11351 7 +     75513 aca-ctag
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  9293 7 +     97555 aca-ctag
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            12221 7 +     26496 aca-ctag
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  2826 7 -     17153 aca-ctag
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              12402 7 +    111500 aca-ctag
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20236219 7 + 206538554 aaa-ctag
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195062 7 + 205367284 aaa-ctag
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  8576 7 -     36744 aaa-ctag
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     424747 7 -    453645 aaa-ctag
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             2454 7 +     11339 aaa-ctag
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1959596                            6262 7 +      6795 aaa-ctag
i Galagoides_demidoff.k141_1959596                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_197845               2664 7 -      3123 aaa-ctaa
i Galeopterus_variegatus.GalVar_scaffold_197845          C 0 C 0
s Gorilla_beringei.k141_3596273                              13975 7 -     32273 aca-ctag
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186336123 7 + 186649187 aca-ctag
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           5481 7 -     19426 aca-ctag
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             10630 7 -     15286 aca-ctag
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             12269 7 +     18253 aca-ctag
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         12370 7 -     41752 aca-ctag
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         12208 7 -     16460 aca-ctag
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               241364 7 +    327341 aaa-ctag
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_403422                 671 7 -       893 aaa-caca
i Heterohyrax_brucei.HetBruBak_scaffold_403422           I 37 I 10
s Hipposideros_armiger.JXIK01000431.1                       110837 7 +   1711038 aaa-ctaa
i Hipposideros_armiger.JXIK01000431.1                    I 1 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               42266 7 +     43066 aaa-ctaa
i Hipposideros_galeritus.HipGal_scaffold_29171           I 1 C 0
s Hoolock_leuconedys.ctg274                                    432790 7 +    630532 ata-ctgg
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  43503 7 +     55795 aaa-ctaa
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_232023                                 556 7 -     12752 ata-ctag
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                                600 7 +     14092 ata-ctag
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189541383 7 - 191637585 ata-ctag
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3334277 7 -  11177569 ata-ctag
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_3655594                                   21173 7 +     31101 aca-ctag
i Indri_indri.k141_3655594                               C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_50988                    12355 7 +     29960 aaa-ctag
i Lasiurus_borealis.LasBor_scaffold_50988                C 0 I 39
s Lemur_catta.scaffold_24                                 15522713 7 -  30322482 aca-ctag
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        5644 7 +     64341 aca-ctag
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           2705 7 +      4941 acg-ctag
i Leontocebus_illigeri.k141_3350179                      C 0 I 9
s Leontocebus_nigricollis.k141_4610752                        5573 7 +     35603 acg-ctag
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    27076 7 +     38576 acg-ctag
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         23773 7 +     66356 acg-ctag
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          9621 7 -     23766 aca-ctag
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             27687 7 +     45836 aca-ctag
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                           212 7 +     25010 aca-caag
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      25623 7 +     54090 aca-ctag
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3041900 7 +   3914936 aaa-ctat
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     4573 7 -     14121 aaa-ctag
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 18
s Lophocebus_aterrimus.ctg367                              1435138 7 +   1826925 aca-ctag
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                            4216026 7 -  43346337 aaa-ctag
i Loxodonta_africana.GL010049.1                          I 9 I 10
s Lycaon_pictus.CM007581.1                                17954178 7 -  59628241 aaa-ctat
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               4953 7 +     40492 aca-ctag
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59674215 7 +  60120075 aca-ctag
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 10709 7 -     26193 aca-ctag
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            78513 7 -    114318 aca-ctag
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  4212 7 -     23192 aca-ctag
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                13673 7 -     29190 aca-ctag
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  22240 7 +     37952 aca-ctag
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186837328 7 + 187317192 ACA-CTAG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25455890 7 -  25927173 ACA-CTAG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  78089 7 +     89720 aca-ctag
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 5086 7 +     20474 aca-ctag
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   4887 7 -     14993 aca-ctag
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  327758 7 -    668171 aca-ctag
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 3198 7 -     24072 aca-ctag
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               23827 7 -     45290 aca-ctag
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 89662 7 +     94391 aaa-ctaa
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23935411 7 -  24302211 aca-ctag
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               349543 7 +    752769 aca-ctag
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         9384 5 -    207569 --a-ctaa
i Megaderma_lyra.MegLyr_scaffold_4542                    I 2 I 20
s Mellivora_capensis.MelCap_flattened_line_69365              9080 7 +     13704 aaa-ctat
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mico_argentatus.k141_1239457                                3865 1 -      7380 -------a
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               2932 7 +     18990 acg-ctag
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      3871 7 -      7356 acg-ctag
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18290125 7 -  93316391 ACA-CTAG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    19455 7 -    145209 aaa-atat
i Microgale_talazaci.MicTal_scaffold_6613                I 635 I 1432
s Micronycteris_hirsuta.MicHir_scaffold_52381                14446 8 -     19307 aaacctaa
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849712 7 +   8254450 aaa-ctaa
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             33389 7 +     64694 aaa-ctaa
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           7134 7 -     28506 aca-ctag
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         4768 7 -      8324 aaa-ctat
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      7682 7 -     37649 aca-ctag
i Mirza_zaza.k141_952172                                 I 13 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140364 8 -    366855 aaaactaa
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   34476 7 +     37127 aaa-ctag
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5554 7 +     14753 aaa-ctaa
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mustela_putorius.JH418006.1                               300257 7 -  14710649 aaa-ctac
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                278726 7 -  10118263 aaa-ctaa
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1586425 7 -   6019432 caa-ctaa
i Myotis_davidii.KB100139.1                              I 1 C 0
s Myotis_lucifugus.GL429869.1                              3902490 7 -   4330536 aaa-ctaa
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        33050 7 +     33610 aaa-ctaa
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187844 7 +    196477 aaa-ctag
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 10 I 10
s Nasalis_larvatus.k141_413338                               13129 7 +     21681 aca-ctag
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306026 7 +  31847680 aaa-ctat
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9148436 7 -   9404916 aaa-ctat
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Ochotona_princeps.JH802162.1                             1361661 7 +   3988456 aaa-ctag
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              505706 7 -   2017862 aaa-ctat
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               8995 4 -     18566 ----aaat
i Orycteropus_afer.OryAfe_flattened_line_144387          I 1418 C 0
s Oryctolagus_cuniculus.CM000791.1                        67145418 7 + 174332312 aaa-ctag
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 18
s Otocyon_megalotis.JAEUCK010005147.1                       461400 7 -    559221 aaa-ctat
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         2289 7 +      8798 aaa-ctag
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             694454 7 -   1103335 aaa-ctag
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    42071 7 +     80009 ACA-CTAG
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03001836.1                             27996 7 +     51860 ACA-CTAG
i Pan_troglodytes.NBAG03001836.1                         C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  150229 7 +    230217 aaa-ctag
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                263434 7 +  18783137 aaa-ctag
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4720072 7 -   8748460 aaa-ctag
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183441165 7 + 183742232 ACA-CTAG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             4859 7 +     20448 aca-ctag
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20561667 7 +  20919399 aca-ctag
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   3603 7 +     41871 aca-ctag
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     6888 7 +     27711 aca-ctag
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  6968 7 +      9205 aca-ctag
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11692 7 -     78924 aaa-ctag
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            8433 7 +     13100 aaa-tgag
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             6809 7 +     25941 aaa-tgag
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Piliocolobus_badius.k141_1234363                           41626 7 +     62158 aca-ctag
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        36357 7 +     89929 aca-ctag
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            37773 7 +     51399 aca-ctag
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14294011 7 -  14605196 ACA-CTAG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              857 7 +     22620 aaa-ctaa
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189129105 7 + 189387572 ACA-CTAg
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9568713 7 +   9816681 aca-ctag
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               71297 7 -     81375 aca-ctag
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              3117 7 +     19060 aca-ctag
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 11671 7 -     22811 aaa-caca
i Procavia_capensis.ProCapCap_scaffold_85530             I 9 I 10
s Prolemur_simus.MPIZ01000396.1                            2595391 7 -   4620579 ACA-CTAG
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     989375 7 +   2598838 ACA-CTAG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          27685 7 +     38485 aca-ctag
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             3845 7 +      4256 aca-ctag
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          25198 7 +     35766 aca-ctag
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           3380 7 -     24134 aca-ctag
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        27202 7 -     67325 aca-ctag
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           3438 7 -      6182 aca-ctag
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            13744 8 -     21811 aaaacaaa
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39279 7 +     42204 aaa-ctat
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22975826 7 +  28871421 aaa-ctaa
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1358912 7 +   4952924 aaa-ctaa
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20273348 7 -  38429054 aaa-ctag
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             13128 7 -     91421 aca-ctag
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7607254 7 +   7812017 aca-ctag
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             13102 7 -     72585 aca-ctag
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             4809 7 -     11128 aca-ctag
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91234165 7 - 195417433 ACA-CTAG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7669814 7 +   7961872 aca-ctag
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                86844 7 -     96226 aaa-ctaa
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               5958 7 -      8359 acg-ctag
i Saguinus_bicolor.k141_2619299                          C 0 I 5
s Saguinus_imperator.k141_717981                              5901 7 -      6207 acg-ctag
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               11628 7 +     13640 acg-ctag
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               6490 7 +      8564 acg-ctag
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209466772 7 + 209938924 acg-ctag
i Saguinus_midas.LG03                                    C 0 I 649
s Saguinus_mystax.k141_374627                                 5978 7 -      9399 acg-ctag
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_161539                                 465 7 +      1573 aca-tgag
i Saguinus_oedipus.k141_161539                           I 1 C 0
s Saimiri_boliviensis.NW_024100920.1                     119949341 7 - 121099817 GCA-CTAG
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       21797 7 +     46362 gca-ctag
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               21892 7 +     45824 gca-ctag
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             38520 7 -     64574 gca-ctag
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               1526 7 -     23631 gca-ctag
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 21785 7 -     61129 gca-ctag
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          17634 7 -     19888 aca-ctag
i Semnopithecus_entellus.k141_11662                      C 0 I 18
s Semnopithecus_hypoleucos.k141_1615806                      24837 7 +     39453 aca-ctag
i Semnopithecus_hypoleucos.k141_1615806                  C 0 I 18
s Semnopithecus_johnii.k141_670120                            5363 7 +     27826 aca-ctag
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             4883 7 -     19483 aca-ctag
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      4945 7 +      7198 aca-ctag
i Semnopithecus_schistaceus.k141_1584426                 C 0 I 18
s Semnopithecus_vetulus.k141_1200928                         13205 7 +     15514 aca-ctag
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               2811 7 +   1910179 aaa-ctaa
i Solenodon_paradoxus.SolPar_flattened_line_126          I 1 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             29781 7 +     97271 aaa-atat
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              17365 7 -    196729 aaa-ctag
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.JH118708.1                                      34577 8 -     47482 acaacagc
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1091425 7 -   1523678 ata-ctag
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 9661 7 +     41958 aag-ctaa
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 71200 7 +    116680 aaa-ctag
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 10 I 10
s Tapirus_indicus.TapInd_scaffold_9301                      117813 7 -    156842 aaa-ctaa
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    386266 7 +    539355 aaa-ctaa
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               24728 7 +     70052 aaa-ctgg
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_2029956                               4068 7 +      4644 aaa-ctgg
i Tarsius_wallacei.k141_2029956                          C 0 C 0
s Theropithecus_gelada.CM009954.1                        186426531 7 + 186847797 ACA-CTAG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     79987 8 +    610378 aaacctaa
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          8936 7 -     20410 aca-ctag
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    13130 7 +     15221 aca-ctag
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        9037 7 +     19930 aca-ctag
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       5466 7 -     19997 aca-ctag
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            45587 7 -     60166 aca-ctag
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        13059 7 -     27529 aca-ctag
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     13000 7 -     18194 aca-ctag
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           6733 7 -     21137 aca-ctag
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    5436 7 -     10723 aca-ctag
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         4588 7 +      9834 aca-ctag
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        22904 7 +     32220 aca-ctag
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5937003 7 +   6242583 aca-ctag
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        6252 7 +     20839 aca-ctag
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2154285 7 +   4065304 aaa-ctag
i Tupaia_chinensis.KB320699.1                            C 0 I 7
s Tupaia_tana.TupTan_flattened_line_97126                     7941 7 -     10553 aaa-ctag
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 3
s Ursus_maritimus.KK499267.1                               4849476 7 -   5085361 aaa-ctat
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  10046 7 +     50397 aca-caag
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             10101 7 +     24756 aca-caag
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5370928 7 -   5488506 atactt-a
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  9846 7 -     43706 aaa-ctat
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          4214 7 +     86975 aaa-ctat
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Sapajus_macrocephalus.k141_351809                          54316 0 -     80660 C
e Sapajus_apella.ctg103                                    5419275 0 -   5703754 C
e Chiropotes_albinasus.k141_2813271                           8451 841 +     11226 I
e Cebus_unicolor.k141_219506                                 14903 0 -     16904 I
e Cebus_olivaceus.k141_1000828                                1853 231 -      2944 I
e Cebus_albifrons.Contig27                                25650611 0 +  26074798 C
e Mus_pahari.LT608297.1                                   31352818 0 -  89631738 C
e Mus_spretus.CM004101.1                                  90750234 0 - 130317789 C
e Mus_musculus.chr8                                       87648156 0 - 129401213 C
e Mus_caroli.LT608237.1                                   84359172 0 - 120012414 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Loris_tardigradus.ctg83                                  1003049 50 +   6120653 I
e Loris_lydekkerianus.k141_2539221                            4210 50 +     11245 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Xerus_inauris.XerIna_scaffold_48378                        22715 0 -     24430 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   52652 8 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   3750 9 +      8208 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937 0 +    114563 C
e Spermophilus_dauricus.KZ294078.1                         1951468 299 -   3870691 I
e Sorex_araneus.JH798187.1                                13649746 0 -  18376816 C
e Sigmodon_hispidus.SigHis_scaffold_60841                    11304 0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152480 8 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rattus_norvegicus.chr16                                 53568239 0 +  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Psammomys_obesus.NESX01036370.1                             8401 0 -     21651 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813 0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18191985 0 -  18517816 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    77382 0 +    102263 C
e Ondatra_zibethicus.OndZib_scaffold_46174                   22267 24 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105748664 47 + 199412804 I
e Nycticebus_coucang.k141_771082                                88 47 -      2667 I
e Nycticebus_bengalensis.LG01                            102578243 47 - 196305487 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Nannospalax_galili.AXCS01343547.1                            805 0 +       996 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11258701 7 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12180532 2 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 30759 0 +    140813 C
e Marmota_marmota.CZRN01000018.1                          33100580 298 -  40650429 I
e Manis_pentadactyla.KN006162.1                              50341 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352 0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Ictidomys_tridecemlineatus.JH393364.1                    7518272 302 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      81626 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547 0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Ellobius_talpinus.LOJH01109367.1                            3704 7 -      6299 I
e Ellobius_lutescens.LOEQ01008920.1                          17650 7 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089466 1162 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084 0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            62283 174 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    835315 0 +   1526836 C
e Crocidura_indochinensis.CroInd_scaffold_37019               1709 0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11665468 2 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 48141 0 +     63868 C
e Condylura_cristata.JH655891.1                           17547413 8 -  53390261 I
e Chinchilla_lanigera.JH722012.1                           1251498 0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_713168             195 9 -      2554 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99291 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157 0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    136243 0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      10117 439 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     72139 576 -     89534 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     68454 0 +     87051 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       4730 37 +     62944 GA----ACA-GA--A-----AGCAGA--------------------------CGA----G-------TGG-------CT----G-----C----AGGGCT-GGG-TCT
s Acinonyx_jubatus.LLWD01001279.1                           826357 39 -   1699592 ga----aga-ga--a-----cgcaga--------------------------tta----g-------tgg-------tt----g-----c-ct-agggct-gga-tat
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     68454  2 +     87051 ---------------------------------------------------------------------------------------------------------TA-
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9509617 43 -  29979442 ga----aca-ga--a-----agcaga--------------------------tcactcac-------tgg-------tt----g-----c-ct-agagct-gga-tat
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             78402 39 -    347723 ga----aca-ga--a-----agcaga--------------------------tca----c-------tgg-------tt----g-----c-ct-agggct-gga-tat
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     72715  2 -     89534 ---------------------------------------------------------------------------------------------------------ag-
i Allactaga_bullata.AllBul_scaffold_9566                 I 576 C 0
s Allenopithecus_nigroviridis.k141_3361533                   12643 37 -     52922 ga----aca-ga--a-----agcaga--------------------------tga----g-------ggg-------ct----g-----c----aggcct-ggg-tct
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         12586 37 -     28001 ga----aca-ga--a-----agcaga--------------------------tga----g-------ggg-------ct----g-----c----aggcct-ggg-tct
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          3032 37 -     18505 ga----aca-ga--a-----agcaga--------------------------tga----g-------ggg-------ct----g-----c----aggcct-ggg-tct
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           3881 37 -     12518 ga----aca-ga--a-----agcaga--------------------------tga----g-------ggg-------ct----g-----c----aggcct-ggg-tct
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                              1446 37 -     27731 ga----gca-ga--a-----agcaga--------------------------tcg----g-------tgg-------ct----g-----c----agggct-ggg-tct
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                1571 37 +      3134 ga----gca-ga--a-----agcaga--------------------------tcg----g-------tgg-------ct----g-----c----agggct-ggg-tct
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               1706 37 -     45847 ga----gca-ga--a-----agcaga--------------------------tcg----g-------tgg-------ct----g-----c----agggct-ggg-tct
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                22912 37 +     25266 ga----gca-ga--a-----agcaga--------------------------tcg----g-------tgg-------ct----g-----c----agggct-ggg-tct
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           2096 37 +      2906 ga----gca-ga--a-----agcaga--------------------------tcg----g-------tgg-------ct----g-----c----agggct-ggg-tct
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            16209 37 -     18578 ga----gca-ga--a-----agcaga--------------------------tcg----g-------tgg-------ct----a-----c----agggct-ggg-tct
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              1596 37 +     47717 ga----gca-ga--a-----agcaga--------------------------tcg----g-------tgg-------ct----g-----c----agggct-ggg-tct
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             1726 37 -      3544 ga----gca-ga--a-----agcaga--------------------------tcg----g-------tgg-------ct----g-----c----agggct-gcg-tct
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             12946 37 +     50774 ga----gca-ga--a-----agcaga--------------------------tcg----g-------tgg-------ct----g-----c----agggct-ggg-tct
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184134 39 +    412891 ga----aca-ga--a-----agcaga--------------------------tca----g-------tgg-------ct----g-----c-cc-tggaga-gca-cat
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  13567 38 -     33861 ga----aca-ca--a-----agcaga--------------------------cgg----g-------tgg-------ct----g-----c--a-agggct-ggg-tct
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            13587 38 -     34016 ga----aca-ca--a-----agcaga--------------------------cgg----g-------tgg-------ct----g-----c--a-agggct-ggg-tct
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4295984 38 -   5030052 GA----ACA-CA--A-----AGCAGA--------------------------CGG----G-------TGG-------CT----G-----C--A-AGGGCT-GGG-TCT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             13589 38 -     34685 ga----aca-ca--a-----agcaga--------------------------cgg----g-------tgg-------ct----g-----c--a-agggct-ggg-tct
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               26710 38 -     47192 ga----aca-ca--a-----agcaga--------------------------cgg----g-------tgg-------ct----g-----c--a-agggct-ggg-tct
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      10556  3 +     20879 ---------------------------------------------------------------------------------------------------------cac
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 439 C 0
s Arctocebus_calabarensis.k141_2318572                        9803 21 +     14667 gg----aga-ga--a-----aacaga--------------------------tca----g-------agg--------------------------------------
i Arctocebus_calabarensis.k141_2318572                   C 0 I 16
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3546 39 +     43469 ga----aca-ga--a-----ggcaga--------------------------tca----g-------tgg-------tt----g-----c-cc-tggaat-gtg-tat
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  52328 38 -     92717 ga----ata-ga--a-----agcaga--------------------------tgg----g-------tgg-------cc----a-----t-ca-agggct--gg-cat
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              52957 38 +     85213 ga----ata-ga--a-----agcaga--------------------------tgg----g-------tgg-------cc----a-----t-ca-agggct--gg-cat
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             3327 38 -     10423 ga----gca-gg--a-----agcaga--------------------------tgg----g-------tgg-------ct----g-----c--g-agggct-ggg-tct
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             22828 38 +     31915 ga----gca-ga--a-----ggcaga--------------------------tgg----g-------tgg-------ct----g-----c--g-agggct-ggg-act
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            3297 38 +      5267 aa----gca-gg--a-----agcaga--------------------------tgg----g-------tgg-------ct----g-----c--g-acggct-ggg-tct
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23588511 38 - 189096842 GA----GCA-GG--A-----AGCAGA--------------------------TGG----G-------TGG-------CT----G-----C--G-AGCGCT-GGG-TCT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             10041 38 -     12001 ga----gca-gg--a-----agcaga--------------------------tgg----g-------tgg-------ct----g-----c--g-agcgct-ggg-tct
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10001448 39 -  17673402 ga----aca-aaa-a-----aacaga--------------------------tca----g-------ttt-------tt----g-----c-ca-aa-gct-gcg-ggt
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2333906 39 -   7040546 ga----aca-aaa-a-----aacaga--------------------------tca----g-------ttt-------tt----g-----c-ca-aa-gct-gcg-ggt
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  402188 40 -   1652518 ga----aca-aaaaa-----aacaga--------------------------tca----g-------ttt-------tt----g-----c-ca-aa-gct-gcg-ggt
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17798237 39 -  60362399 ta----aca-ga--a-----agcagc--------------------------tca----g-------tgg-------tt----g-----c-ct-agggct-gga-tat
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184294 39 -    185531 ta----aca-ga--a-----agcagc--------------------------tca----g-------tgg-------tt----g-----c-ct-agggct-gga-tat
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9033680 39 -   9314153 ta----aca-ga--a-----agcagc--------------------------tca----g-------tgg-------tt----g-----c-ct-agggct-gga-tat
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17957945 39 -  59632846 ta----aca-ga--a-----agcagc--------------------------tca----g-------tgg-------tt----g-----c-ct-agggct-gga-tat
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18499457 39 +  63665305 ta----aca-ga--a-----agcagc--------------------------tca----g-------tgg-------tt----g-----c-ct-agggct-gga-tat
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           154613 38 -    496798 TA----ACA-GA--A-----GG-AGA--------------------------TCA----G-------TAA-------TT----G-----C-CA-AGGGCT-GGG-CAC
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                3908 39 -     11696 ga----aca-gg--a-----agcaga--------------------------tca----g-------tgg-------tt----g-----c-cc-tggagt-gtg-tat
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    136243  3 +    179628 ---------------------------------------------------------------------------------------------------------tat
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     92072 39 +    217609 aa----aaa-aa--a-----aacagg--------------------------tca----g-------tgt-------tt----g-----c-cc-atgact-ggg-tgt
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          7951 38 -     11392 ga----gca-gg--a-----agcaga--------------------------tgg----g-------tgg-------ct----g-----c--g-agggtt-ggg-tct
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               4049 38 -      7577 ga----gca-gg--a-----agcaga--------------------------tgg----g-------tgg-------ct----g-----t--g-agggct-ggg-tct
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         4123 38 +     31688 ta----aca-ga--a-----gg-aga--------------------------tca----g-------taa-------tt----g-----c-ca-agggct-ggg-cac
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12230497 39 +  27778364 aa----aca-ga--a-----agcaga--------------------------tca----g-------ttg-------tt----g-----c-ct-agggct-gga-tat
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1524 39 -     25243 aa----aca-ga--a-----agcaga--------------------------tca----g-------ttg-------tt----g-----c-ct-agggct-gga-tat
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4473598 37 +   4669795 GA----ACA-GA--A-----AGCAGA--------------------------TGA----G-------GGG-------CT----G-----C----AGGGCT-GGG-TCT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        12147 37 -     19203 ga----aca-ga--a-----agcaga--------------------------tga----g-------ggg-------ct----g-----c----agggct-ggg-tct
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           6569 37 +      8260 ga----aca-ga--a-----agcaga--------------------------tga----g-------ggg-------ct----g-----c----agggct-ggg-tct
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           6795 37 +     27781 ga----aca-ga--a-----agcaga--------------------------tga----g-------ggg-------ct----g-----c----agggct-ggg-tct
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         6953 37 -     20310 ga----aca-ga--a-----agcaga--------------------------tga----g-------ggg-------ct----g-----c----aggcct-ggg-tct
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           9932 37 +     29689 ga----aca-ga--a-----agcaga--------------------------tga----g-------ggg-------ct----g-----c----aggcct-ggg-tct
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            4363 37 +      9989 ga----aca-ga--a-----agcaga--------------------------tga----g-------ggg-------ct----g-----c----aggcct-ggg-tct
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          12611 37 -     27936 ga----aca-ga--a-----agcaga--------------------------tga----g-------ggg-------ct----g-----c----aggcct-ggg-tct
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            1477 37 -     17152 ga----aca-ga--a-----agcaga--------------------------tga----g-------ggg-------ct----g-----c----aggcct-ggg-tct
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38815015 37 +  39242232 ga----aca-ga--a-----agcaga--------------------------tga----g-------ggg-------ct----g-----c----aggcct-ggg-tct
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21220706 37 -  21565898 ga----aca-ga--a-----agcaga--------------------------tga----g-------ggg-------ct----g-----c----aggcct-ggg-tct
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       37824 37 -     53127 ga----aca-ga--a-----agcaga--------------------------tga----g-------ggg-------ct----g-----c----aggcct-ggg-tct
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        5095 37 +      7159 ga----aca-ga--a-----agcaga--------------------------tga----g-------ggg-------ct----g-----c----aggcct-ggg-tct
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       12627 37 -     27947 ga----aca-ga--a-----agcaga--------------------------tga----g-------ggg-------ct----g-----c----aggcct-ggg-tct
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         12600 37 +     17596 ga----aca-ga--a-----agcaga--------------------------tga----g-------ggg-------ct----g-----c----aggcct-ggg-tct
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          1834 37 +     26000 ga----aca-ga--a-----agcaga--------------------------tga----g-------ggg-------ct----g-----c----aggcct-ggg-tct
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             19737 38 -     52598 ga----ata-ga--a-----agcaga--------------------------tga----g-------tgg-------tc----a-----t-ca-agggct--gg-cat
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           15088 38 +     57038 ga----ata-ga--a-----agcaga--------------------------tga----g-------tgg-------ac----a-----t-ca-agggct--gg-cat
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           9292 31 +     11226 --------------G-----AGCAGA--------------------------TGG----G-------TGG-------CT----G-----C--A-AGGCCT-GGG-TCT
i Chiropotes_albinasus.k141_2813271                      I 841 C 0
s Chlorocebus_aethiops.ctg25                              18426584 37 -  18827391 ga----aca-ga--a-----agcaca--------------------------tga----g-------ggg-------ct----g-----c----aggcct-ggg-tct
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       13021 37 -     50209 ga----aca-ga--a-----agcaga--------------------------tga----g-------ggg-------ct----g-----c----aggcct-ggg-tct
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135420021 37 + 135778131 GA----ACA-GA--A-----AGCAGA--------------------------TGA----G-------GGG-------CT----G-----C----AGGCCT-GGG-TCT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 16933 29 +     19366 -----------------------------------------------------------cagatcactgg-------tt----g-----c-ca-ggggct-ggg-cat
i Choloepus_didactylus.ChoDid_scaffold_45914             I 10 C 0
s Choloepus_hoffmanni.KN194906.1                            172033 29 +    839153 -----------------------------------------------------------cagatcactgg-------tt----g-----c-ca-ggggct-ggg-cat
i Choloepus_hoffmanni.KN194906.1                         I 10 C 0
s Colobus_angolensis.KN981557.1                            1908535 37 +   2368649 GA----ACA-GA--A-----AGCAGA--------------------------TGA----G-------GGG-------CT----G-----C----AGGGCT-GGG-TCT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199948211 40 + 200372422 gagga-aca-ga--a-----agcaga--------------------------tga----g-------ggg-------ct----g-----c----agggct-ggg-tct
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              35073 37 +     84244 ga----aca-ga--a-----agcaga--------------------------tga----g-------ggg-------ct----g-----c----agggct-ggg-tct
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          13372 39 -     20389 aa----aca-ga--a-----aacaga--------------------------tca----g-------tgg-------tt----g-----c-cc-atggac-gaa-tat
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 48141  2 +     63868 ---------------------------------------------------------------------------------------------------------TG-
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11665470  2 + 224834208 ---------------------------------------------------------------------------------------------------------ta-
i Cricetulus_griseus.LT883664.1                          I 2 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27534 39 -     87169 ga----aga-ga--a-----ccaaca--------------------------tta----g-------tag-------tt----g-----c-ct-agggct-gga-tat
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    835315  3 +   1526836 ---------------------------------------------------------------------------------------------------------CAC
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 488
s Daubentonia_madagascariensis.ctg71                      12535953 38 -  12879189 ga----ata-ga--a-----agcaga--------------------------tcg----g-------tgg-------cc----g-----t-ca-agggct--gg-cat
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8628924 39 +  20541912 ga----aca-ga--a-----ggcaga--------------------------cca----g-------tgg-------ct----g-----c-cc-tgcagt-gcg-tat
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672347 39 +   1390856 ga----aca-ga--a-----agcaga--------------------------tca----g-------tgg-------tt----g-----c-ct-agggct-gga-tat
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    5100 39 +    198055 aa----aca-ga--a-----agcaga--------------------------tca----g-------tgg-------tt----g-----c-ct-agggct-gga-tat
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE759718.1                                   9577 39 +     11740 aa----aca-ga--a-----agcaga--------------------------tca----g-------tgg-------tt----g-----c-cc-agggct-ggt-tat
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Enhydra_lutris.KZ291758.1                               16328370 39 -  41312741 ga----aca-ga--a-----agcaga--------------------------tca----c-------tgg-------tt----g-----c-ct-acggtt-gga-tat
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144488 39 -  14770903 ga----aca-ga--a-----agcaga--------------------------gca----a-------tgg-------ct----g-----c-cc-aggact-gca-tcc
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1282409 39 +   4378816 ga----aca-ga--a-----agcaga--------------------------tca----g-------tag-------tt----g-----c-ct-agagct-gga-tac
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18530230 39 -  39960074 ga----aca-ga--a-----agcaga--------------------------tca----g-------tag-------tt----g-----c-ct-agagct-gga-tac
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               32245 39 +    498745 ga----aca-ga--a-----agcaga--------------------------tca----g-------tag-------tt----g-----c-ct-agagct-gga-tac
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21203192 37 -  21539334 ga----aca-ga--a-----agcaga--------------------------tga----g-------ggg-------ct----g-----t----aggcct-ggg-tct
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              12433 38 -     14127 ga----ata-ga--a-----agcaga--------------------------tga----g-------tgg-------cc----a-----t-ca-agggct--gg-cat
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                5131 38 -     16928 ga----ata-ga--a-----agcaga--------------------------tga----g-------tgg-------cc----a-----t-ca-agggct--gg-cat
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              14160 38 -     25546 ga----ata-ga--a-----agcaga--------------------------tga----g-------tgg-------cc----a-----t-ca-agggct--gg-cat
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            11358 38 +     26330 ga----ata-ga--a-----agcaga--------------------------tga----g-------tgg-------cc----a-----t-ca-agggct--gg-cat
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 12598 38 +     23973 ga----ata-ga--a-----agcaga--------------------------tga----g-------tgg-------cc----a-----t-ca-agggct--gg-cat
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                11358 38 +     75513 ga----ata-ga--a-----agcaga--------------------------tga----g-------tgg-------cc----a-----t-ca-agggct--gg-cat
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  9300 38 +     97555 ga----ata-ga--a-----agcaga--------------------------tga----g-------tgg-------cc----a-----t-ca-agggct--gg-cat
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            12228 20 +     26496 ga----ata-ga--a-----agcaga--------------------------tga----g-------tg---------------------------------------
i Eulemur_rubriventer.k141_571033                        C 0 I 5
s Eulemur_rufus.k141_1476633                                  2833 38 -     17153 ga----ata-ga--a-----agcaga--------------------------tga----g-------tgg-------cc----a-----t-ca-agggct--gg-cat
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              12409 38 +    111500 ga----ata-ga--a-----agcaga--------------------------tga----a-------tgg-------cc----a-----t-ca-agggct--gg-cat
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20236226 35 + 206538554 ga----aga-gg--a-----cgcaga--------------------------tta----g-------tgg-------tt----g-----c-ct-agggct-gg-----
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195069 35 + 205367284 ga----aga-gg--a-----cgcaga--------------------------tta----g-------tgg-------tt----g-----c-ct-agggct-gg-----
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  8583 35 -     36744 ga----aga-gg--a-----cgcaga--------------------------tta----g-------tgg-------tt----g-----c-ct-agggct-gg-----
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     424754 21 -    453645 gc----aga-ga--a-----aacaga--------------------------tta----g-------gag--------------------------------------
i Galago_moholi.ctg2040                                  C 0 I 16
s Galago_senegalensis.k141_631886                             2461 21 +     11339 gc----aga-ga--a-----aacaga--------------------------tta----g-------gag--------------------------------------
i Galago_senegalensis.k141_631886                        C 0 I 16
s Galagoides_demidoff.k141_1959596                            6269 21 +      6795 gc----aga-ga--a-----aacaga--------------------------tca----g-------aag--------------------------------------
i Galagoides_demidoff.k141_1959596                       C 0 I 16
s Galeopterus_variegatus.GalVar_scaffold_197845               2671 39 -      3123 ga----aca-ga--a-----agcaga--------------------------tca----g-------tga-------tt----g-----c-ca-agggct-ggg-cat
i Galeopterus_variegatus.GalVar_scaffold_197845          C 0 C 0
s Gorilla_beringei.k141_3596273                              13982 37 -     32273 ga----aca-ga--a-----agcaga--------------------------cga----g-------tgg-------ct----g-----c----agggct-ggg-tct
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186336130 37 + 186649187 ga----aca-ga--a-----agcaga--------------------------cga----g-------tgg-------ct----g-----c----agggct-ggg-tct
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           5488 38 -     19426 ga----ata-ga--a-----agcaga--------------------------tga----g-------agg-------ct----g-----t-ca-agggct--gc-cat
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             10637 38 -     15286 ga----ata-ga--a-----agcaga--------------------------tga----g-------agg-------ct----g-----t-ca-agggct--gc-cat
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             12276 38 +     18253 ga----ata-ga--a-----agcaga--------------------------tga----g-------agg-------ct----g-----t-ca-agggct--gc-cat
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         12377 38 -     41752 ga----ata-ga--a-----agcaga--------------------------tga----g-------agg-------ct----g-----t-ca-agggct--gc-cat
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         12215 38 -     16460 ga----ata-ga--a-----agcaga--------------------------tga----g-------agg-------ct----g-----t-ca-agggct--gc-cat
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               241371 39 +    327341 ga----aga-ca--a-----agcaca--------------------------tta----g-------tag-------tt----g-----g-ct-agggct-gga-tat
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_403422                 688 28 -       893 -----------------------------------------------------------a-------ggatcagcggtt----g-----c-c--agggct-ggg-tgg
i Heterohyrax_brucei.HetBruBak_scaffold_403422           I 10 C 0
s Hipposideros_armiger.JXIK01000431.1                       110844 39 +   1711038 aa----aca-ga--a-----agcaga--------------------------tag----g-------tgg-------tt----g-----c-cc-agggct-ggt-tat
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               42273 39 +     43066 aa----aca-ga--a-----agcaga--------------------------tca----g-------tgg-------tt----g-----c-cc-atggct-ggg-tat
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    432797 36 +    630532 -a----aca-ga--a-----agcaga--------------------------tga----g-------tgg-------ct----g-----c----agggct-ggg-tct
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  43510 39 +     55795 ga----aga-ga--a-----ggcata--------------------------tta----g-------tgg-------tt----g-----c-cc-agggct-gga-tat
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_232023                                 563 36 -     12752 -a----aca-ga--a-----agcaga--------------------------tga----g-------cgg-------ct----g-----c----agggct-ggg-tct
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                                607 36 +     14092 -a----aca-ga--a-----agcaga--------------------------tga----g-------cgg-------ct----g-----c----agggct-ggg-tct
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189541390 36 - 191637585 -a----aca-ga--a-----agcaga--------------------------tga----g-------tgg-------ct----g-----c----agggct-ggg-tct
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3334284 36 -  11177569 -a----aca-ga--a-----agcaga--------------------------tga----g-------tgg-------ct----g-----c----agggct-ggg-tct
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7518574  3 -   7955117 ---------------------------------------------------------------------------------------------------------cac
i Ictidomys_tridecemlineatus.JH393364.1                  I 302 C 0
s Indri_indri.k141_3655594                                   21180 38 +     31101 ga----ata-ga--a-----agcaga--------------------------tga----g-------tgg-------cc----c-----t-ca-agggct--gg-cat
i Indri_indri.k141_3655594                               C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    12913 39 -     42476 ga----aca-gg--a-----agcaga--------------------------tca----a-------tgg-------ct----g-----c-cc-aggact-gca-tcc
i Lasiurus_borealis.LasBor_scaffold_32767                I 41 I 9
s Lemur_catta.scaffold_24                                 15522720 38 -  30322482 ga----ata-ga--a-----agcaga--------------------------tga----g-------tgg-------ct----g-----t-ca-agggct--gc-cat
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_illigeri.k141_3350179                           2721 29 +      4941 ---------------------gcaga--------------------------tgg----g-------tgg-------ct----t-----c--a-agggct-ggg-tct
i Leontocebus_illigeri.k141_3350179                      I 9 I 152
s Leontocebus_fuscicollis.k141_1820339                        5651  6 +     64341 ga----gca-g-------------------------------------------------------------------------------------------------
i Leontocebus_fuscicollis.k141_1820339                   C 0 I 41
s Leontocebus_nigricollis.k141_4610752                        5580 38 +     35603 ga----gca-ga--a-----agcaga--------------------------tgg----g-------tgg-------ct----t-----c-c--agggct-ggg-tct
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    27083 38 +     38576 ga----gca-ga--a-----agcaga--------------------------tgg----g-------tgg-------ct----g-----c--g-agggct-ggg-tct
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         23780 38 +     66356 ga----gca-ga--a-----agcaga--------------------------tgg----g-------tgg-------ct----g-----c--g-agggct-ggg-tct
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          9628 38 -     23766 ga----aaa-ga--a-----agcaga--------------------------tga----g-------tgg-------cc----a-----c-ca-agggct--gg-cat
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             27694 38 +     45836 ga----ata-ga--a-----agcaga--------------------------tga----g-------tgg-------cc----a-----c-ca-agggct--gg-cat
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                           219 38 +     25010 ga----ata-ga--a-----agcaga--------------------------tga----g-------tgg-------cc----a-----t-ca-agggct--gg-cat
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      25630 38 +     54090 ga----ata-ga--a-----agcaga--------------------------tga----g-------tgg-------cc----a-----c-ca-agggct--gg-cat
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3041907 39 +   3914936 ga----aca-ga--a-----agcaga--------------------------tca----c-------tgg-------tt----g-----c-ct-aggact-gga-tat
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     4598 21 -     14121 ------------------------------------------------------------------------------tatttg-----c-ca-agggct-ggg-tat
i Lepus_americanus.LepAme_scaffold_107385                I 18 C 0
s Lophocebus_aterrimus.ctg367                              1435145 37 +   1826925 ga----aca-ga--a-----agcaga--------------------------tga----g-------ggg-------ct----g-----c----agggct-ggg-tct
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                            4216043 22 -  43346337 -----------------------------------------------------------g-------taa-------tt----g-----c-cc-gaggct-ggg-tat
i Loxodonta_africana.GL010049.1                          I 10 C 0
s Lycaon_pictus.CM007581.1                                17954185 39 -  59628241 ta----aca-ga--a-----agcagc--------------------------tca----g-------tgg-------tt----g-----c-ct-agggct-gga-tat
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               4960 37 +     40492 ga----aca-ga--a-----agcgga--------------------------tga----g-------ggg-------ct----g-----c----agggct-ggg-tct
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59674222 37 +  60120075 ga----aca-ga--a-----agcgga--------------------------tga----g-------ggg-------ct----g-----c----agggct-ggg-tct
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 10716 37 -     26193 ga----aca-ga--a-----agcgga--------------------------tga----g-------ggg-------ct----g-----c----agggct-ggg-tct
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            78520 37 -    114318 ga----aca-ga--a-----agcgga--------------------------tga----g-------ggg-------ct----g-----c----agggct-ggg-tct
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  4219 37 -     23192 ga----aca-ga--a-----agcgga--------------------------tga----g-------ggg-------ct----g-----c----agggct-ggg-tct
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                13680 37 -     29190 ga----aca-ga--a-----agcgga--------------------------tga----g-------ggg-------ct----g-----c----agggct-ggg-tct
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  22247 20 +     37952 ga----aca-ga--a-----agcgga--------------------------tga----g-------gg---------------------------------------
i Macaca_maura.k141_2733130                              C 0 I 16
s Macaca_mulatta.NC_041758.1                             186837335 37 + 187317192 GA----ACA-GA--A-----AGCGGA--------------------------TGA----G-------GGG-------CT----G-----C----AGGGCT-GGG-TCT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25455897 37 -  25927173 GA----ACA-GA--A-----AGCGGA--------------------------TGA----G-------GGG-------CT----G-----C----AGGGCT-GGG-TCT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  78096 37 +     89720 ga----aca-ga--a-----agcgga--------------------------tga----g-------ggg-------ct----g-----c----agggct-ggg-tct
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 5093 37 +     20474 ga----aca-ga--a-----agcgga--------------------------tga----g-------ggg-------ct----g-----c----agggct-ggg-tct
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   4894 37 -     14993 ga----aca-ga--a-----agtgga--------------------------tga----g-------ggg-------ct----g-----c----agggct-ggg-tct
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  327765 37 -    668171 ga----aca-ga--a-----agcgga--------------------------tga----g-------ggg-------ct----g-----c----agggct-ggg-tct
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 3205 37 -     24072 ga----aca-ga--a-----agcgga--------------------------tga----g-------ggg-------ct----g-----c----agggct-ggg-tct
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               23834 37 -     45290 ga----aca-ga--a-----agcgga--------------------------tga----g-------ggg-------ct----g-----c----agggct-ggg-tct
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 89669 39 +     94391 aa----gca-ga--a-----agcaga--------------------------tca----g-------tgg-------tt----g-----c-cc-agggct-ggt-tat
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23935418 37 -  24302211 ga----aca-ga--a-----agcaga--------------------------tga----g-------ggg-------ct----g-----c----agggct-ggg-tct
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               349550 37 +    752769 ga----aca-ga--a-----agcaga--------------------------tga----g-------ggg-------ct----g-----c----agggct-ggg-tct
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33100878  3 -  40650429 ---------------------------------------------------------------------------------------------------------cac
i Marmota_marmota.CZRN01000018.1                         I 298 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         9409 19 -    207569 ---------------------------------------------------------------------c-------tt----g-----c-cc-agggat-gga-aag
i Megaderma_lyra.MegLyr_scaffold_4542                    I 20 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              9087 39 +     13704 ga----aca-ga--a-----agcaga--------------------------tca----c-------tgg-------tt----a-----c-ct-agggtt-gga-tat
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 30759  2 +    140813 ---------------------------------------------------------------------------------------------------------TA-
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12180534  2 -  29670104 ---------------------------------------------------------------------------------------------------------tt-
i Mesocricetus_auratus.KB708134.1                        I 2 C 0
s Mico_argentatus.k141_1239457                                3866 38 -      7380 ga----gca-gg--a-----agcaga--------------------------tgg----g-------tgg-------ct----g-----c--g-agggct-ggg-tct
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               2939 38 +     18990 ga----gca-gg--a-----agcaga--------------------------tgg----g-------tgg-------ct----g-----c--g-agggct-ggg-tct
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      3878 38 -      7356 ga----gca-gg--a-----agcaga--------------------------tgg----g-------tgg-------ct----g-----c--g-agggct-ggg-tct
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18290132 38 -  93316391 GA----ATA-GA--A-----AGCAGA--------------------------TGA----G-------TGG-------TT----G-----T-CA-AGGGCT--GG-CAT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    20894  4 -    145209 aa----aa----------------------------------------------------------------------------------------------------
i Microgale_talazaci.MicTal_scaffold_6613                I 1432 I 16
s Micronycteris_hirsuta.MicHir_scaffold_52381                14454 39 -     19307 ga----aca-ga--a-----agcaga--------------------------tca----g-------tgg-------tt----g-----c-cc-tggagt-atg-tat
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849719 39 +   8254450 ga----aca-ga--a-----agcaga--------------------------tca----g-------tgg-------tg----g-----c-cc-aggact-gca-tac
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             33396 39 +     64694 ga----aca-ga--a-----agcaga--------------------------tca----g-------tgg-------tg----g-----c-cc-aggact-gca-tac
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           7141 37 -     28506 ga----acg-ga--a-----agcaga--------------------------tga----g-------ggg-------ct----g-----c----aggcct-ggg-tct
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         4775 39 -      8324 ga----aca-ga--a-----agcaga--------------------------tca----c-------tgg-------tt----g-----c-ct-agaact-gga-tat
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      7689 38 -     37649 ga----ata-ga--a-----agcaga--------------------------tga----g-------tgg-------tt----g-----t-ca-agggct--gg-cat
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140372 39 -    366855 ga----aca-ga--a-----agcaga--------------------------tca----g-------tgg-------tt----g-----ttc--aggact-gca-tat
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   34483 39 +     37127 ga----aga-ca--a-----cgcaca--------------------------tta----g-------tgg-------tt----g-----c-ct-agggct-gga-tat
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5561 39 +     14753 ga----tca-ga--a-----agcaga--------------------------tca----a-------tgg-------ct----g-----c-cc-aggact-gca-tcc
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84359172  2 - 120012414 ---------------------------------------------------------------------------------------------------------ta-
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87648156  2 - 129401213 ---------------------------------------------------------------------------------------------------------ta-
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31352818  2 -  89631738 ---------------------------------------------------------------------------------------------------------ta-
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90750234  2 - 130317789 ---------------------------------------------------------------------------------------------------------ta-
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               300264 39 -  14710649 ga----aca-ga--a-----agcaga--------------------------tca----c-------tgg-------tt----g-----c-ct-agggtt-gga-tat
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                278733 39 -  10118263 ga----gca-ga--a-----agcaga--------------------------tca----a-------tgg-------ct----g-----c-cc-aggact-gca-tcc
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1586432 39 -   6019432 ga----aca-ga--a-----agcaga--------------------------tca----a-------tgg-------ct----g-----c-cc-aggact-gca-tcc
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902497 39 -   4330536 ga----aca-ga--a-----agcaga--------------------------tca----a-------tgg-------ct----g-----c-cc-aggact-gca-tcc
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        33057 39 +     33610 ga----aca-ga--a-----agcaga--------------------------tca----a-------tgg-------cc----g-----c-cc-aggact-gca-tcc
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187861 29 +    196477 -----------------------------------------------------------cagatcactgc-------tt----t-----c-ca-ggagcc-ggg-cat
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 10 C 0
s Nasalis_larvatus.k141_413338                               13136 37 +     21681 ga----aca-ga--a-----agcaga--------------------------tga----g-------ggg-------ct----g-----c----agggct-ggg-tct
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306033 39 +  31847680 ga----aca-ga--a-----agcaga--------------------------tca----c-------tgg-------tt----g-----c-ct-aggact-gga-tat
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9148443 39 -   9404916 ta----aca-ga--a-----agcagc--------------------------tca----g-------tgg-------tt----g-----c-ct-agggct-gga-tat
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    77382  2 +    102263 ---------------------------------------------------------------------------------------------------------TG-
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67145443 21 + 174332312 ------------------------------------------------------------------------------tgtttg-----c-ca-agggct-ggg-tat
i Oryctolagus_cuniculus.CM000791.1                       I 18 C 0
s Ochotona_princeps.JH802162.1                             1361668 13 +   3988456 ga----aca-ga--a-----atcag-----------------------------------------------------------------------------------
i Ochotona_princeps.JH802162.1                           C 0 I 17
s Odobenus_rosmarus.KB229312.1                              505713 21 -   2017862 ga----aga-ga--a-----agcaga--------------------------tca----c-------tgg--------------------------------------
i Odobenus_rosmarus.KB229312.1                           C 0 I 18
s Orycteropus_afer.OryAfe_flattened_line_144387               8999  4 -     18566 aa----aa----------------------------------------------------------------------------------------------------
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 I 16
s Otocyon_megalotis.JAEUCK010005147.1                       461407 21 -    559221 ta----aca-ga--a-----agcagc--------------------------tca----g-------tgg--------------------------------------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 18
s Otolemur_crassicaudatus.k141_222918                         2296 21 +      8798 gc----aga-ga--a-----aacaga--------------------------tca----g-------gag--------------------------------------
i Otolemur_crassicaudatus.k141_222918                    C 0 I 15
s Otolemur_garnettii.GL873799.1                             694461 21 -   1103335 gC----AGA-GA--A-----AACAGA--------------------------TCA----G-------GAG--------------------------------------
i Otolemur_garnettii.GL873799.1                          C 0 I 15
s Pan_paniscus.KQ411613.1                                    42078 37 +     80009 Ga----aca-ga--a-----agcaga--------------------------tga----g-------tgg-------CT----G-----C----AGGGCT-GGG-TCT
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03001836.1                             28003 37 +     51860 GA----aca-ga--a-----agcaga--------------------------tga----g-------tgg-------CT----G-----C----AGGGCT-GGG-TCT
i Pan_troglodytes.NBAG03001836.1                         C 0 I 24
s Panthera_onca.PanOnc_flattened_line_3271                  150236 39 +    230217 ga----aga-ga--a-----cgcaga--------------------------tta----g-------tgg-------tt----g-----c-ct-ggggct-gga-tat
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                263441 39 +  18783137 ga----aga-aa--a-----cgcaga--------------------------tta----g-------tgg-------tt----g-----c-ct-agggct-gga-tat
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4720079 39 -   8748460 ga----aga-aa--a-----cgcaga--------------------------tta----g-------tgg-------tt----g-----c-ct-agggct-gga-tat
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183441172 37 + 183742232 GA----ACA-GA--A-----AGCGGA--------------------------TGA----G-------GGG-------CT----G-----C----AGGGCT-GGG-TCT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             4866 37 +     20448 ga----aca-ga--a-----agcgga--------------------------tga----g-------ggg-------ct----g-----c----agggct-ggg-tct
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20561674 37 +  20919399 ga----aca-ga--a-----agcgga--------------------------tga----g-------ggg-------ct----g-----c----agggct-ggg-tct
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   3610 37 +     41871 ga----aca-ga--a-----agcgga--------------------------tga----g-------ggg-------ct----g-----c----agggct-ggg-tct
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     6895 37 +     27711 ga----aca-ga--a-----agcgga--------------------------tga----g-------ggg-------ct----g-----c----agggct-ggg-tct
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  6975 37 +      9205 ga----aca-ga--a-----agcgga--------------------------tga----g-------ggg-------ct----g-----c----agggct-ggg-tct
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11699 39 -     78924 ga----aga-ga--a-----cacaga--------------------------tta----g-------tgg-------tt----g-----c-ct-agggct-gga-tat
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18191985  2 -  18517816 ---------------------------------------------------------------------------------------------------------TG-
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Perodicticus_ibeanus.k141_855320                            8440 21 +     13100 gg----aga-ga--a-----aacaga--------------------------tca----g-------agg--------------------------------------
i Perodicticus_ibeanus.k141_855320                       C 0 I 16
s Perodicticus_potto.k141_1092580                             6816 47 +     25941 gg----aga-ga--a-----aacagatcagaaaacagatcaagaaaacttgatca----g-------agg--------------------------------------
i Perodicticus_potto.k141_1092580                        C 0 I 16
s Piliocolobus_badius.k141_1234363                           41633 37 +     62158 ga----aca-ga--a-----agcaga--------------------------tga----g-------ggg-------ct----g-----c----agggct-ggg-tct
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        36364 37 +     89929 ga----aca-ga--a-----agcaga--------------------------tga----g-------ggg-------ct----g-----c----agggct-ggg-tct
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            37780 37 +     51399 ga----aca-ga--a-----agcaga--------------------------tga----g-------ggg-------ct----g-----c----agggct-ggg-tct
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14294018 37 -  14605196 GA----ACA-GA--A-----AGCAGA--------------------------TGA----G-------GGG-------CT----G-----C----AGGGCT-GGG-TCT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              864 39 +     22620 ga----acc-ga--a-----agcaga--------------------------tca----a-------tgg-------ct----g-----c-cc-aagaat-gca-tcc
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189129112 37 + 189387572 ga----aca-ga--a-----agcaga--------------------------tca----g-------tgg-------ct----g-----C----AGGGCT-GGG-TCT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9568720 37 +   9816681 ga----aca-ga--a-----agcaga--------------------------tca----g-------tgg-------ct----g-----c----agggct-ggg-tct
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               71304 37 -     81375 ga----aca-ga--a-----agcaga--------------------------tga----g-------ggg-------ct----g-----c----ggggct-ggg-tct
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              3124 37 +     19060 ga----aca-ga--a-----agcaga--------------------------tga----g-------ggg-------ct----g-----c----ggggct-ggg-tct
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 11688 28 -     22811 -----------------------------------------------------------a-------ggatcagcggtt----g-----c-c--agggtt-ggg-tgg
i Procavia_capensis.ProCapCap_scaffold_85530             I 10 C 0
s Prolemur_simus.MPIZ01000396.1                            2595398 38 -   4620579 GA----ATA-GA--A-----AGCAGA--------------------------TGA----G-------TGG-------CT----G-----T-CA-AGGGCT--GC-CAT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     989382 38 +   2598838 GA----ATA-GA--A-----AGCAGA--------------------------TGA----G-------TGG-------CC----A-----T-CA-AGGGCT--GG-CAT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          27692 38 +     38485 ga----ata-ga--a-----agcaga--------------------------tga----g-------tgg-------cc----a-----t-ca-agggct--gg-cat
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             3852 38 +      4256 ga----ata-ga--a-----agcaga--------------------------tga----g-------tgg-------cc----g-----t-ga-agggct--gg-cat
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          25205 38 +     35766 ga----ata-ga--a-----agcaga--------------------------tga----g-------tgg-------cc----g-----t-ca-agggct--gg-cat
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           3387 38 -     24134 ga----ata-ga--a-----agcaga--------------------------tga----g-------tgg-------cc----g-----t-ca-agggct--gg-cat
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        27209 38 -     67325 ga----ata-ga--a-----agcaga--------------------------tga----g-------tgg-------cc----g-----t-ca-agggct--gg-cat
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           3445 38 -      6182 ga----ata-ga--a-----agcaaa--------------------------tga----g-------tgg-------cc----a-----t-ca-agggct--gg-cat
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             8401  2 -     21651 ---------------------------------------------------------------------------------------------------------ta-
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            13752 37 -     21811 aa----aca-gg--a-----agcaga--------------------------tct----a-------tgg-------tt----g-----c-cc-ag--ct-gca-tat
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39286 39 +     42204 ga----aca-ga--a-----agcaga--------------------------tca----c-------tgg-------tt----g-----c-ct-agggtt-gga-tat
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22975833 39 +  28871421 aa----aca-ga--a-----agcaga--------------------------tca----g-------tgg-------tt----g-----c-cc-agggct-ggt-tat
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1358919 39 +   4952924 aa----aca-aa--a-----agcaga--------------------------tca----g-------tgg-------tt----g-----c-cc-agggct-ggt-tat
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20273355 39 -  38429054 ga----aga-ga--a-----cgcaga--------------------------tta----g-------tgg-------tt----g-----c-ct-agggct-gga-tat
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             13135 37 -     91421 ga----aca-ga--a-----agcaga--------------------------tga----g-------ggg-------ct----g-----c----agggct-ggg-tct
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7607261 37 +   7812017 ga----aca-ga--a-----agcaga--------------------------tga----g-------ggg-------ct----g-----c----agggct-ggg-tct
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             13109 37 -     72585 ga----aca-ga--a-----agcaga--------------------------tga----g-------ggg-------ct----g-----c----agggct-ggg-tct
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53568239  2 +  90668790 ---------------------------------------------------------------------------------------------------------TT-
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             4816 37 -     11128 ga----aca-ga--a-----agcaga--------------------------tga----g-------ggg-------ct----g-----c----agggct-ggg-tct
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91234172 37 - 195417433 GA----ACA-GA--A-----AGCAGA--------------------------TGA----G-------GGG-------CT----G-----C----AGGGCT-GGG-TCT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7669821 37 +   7961872 ga----aca-ga--a-----agcaga--------------------------tga----g-------ggg-------ct----g-----c----agggct-ggg-tct
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                86851 39 -     96226 aa----aca-ga--a-----agcgga--------------------------tca----a-------tgg-------tt----g-----c-cc-agggct-ggg-tat
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               5970 33 -      8359 ----------ga--a-----agcaga--------------------------tcg----g-------tgg-------ct----t-----c--g-agggct-ggg-tct
i Saguinus_bicolor.k141_2619299                          I 5 I 383
s Saguinus_imperator.k141_717981                              5908 38 -      6207 ga----gcag-a--a-----agcaga--------------------------tgg----g-------tgg-------tt----g-----c--g-aaggct-ggg-tct
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               11635 38 +     13640 ga----gcag-a--a-----agcaga--------------------------tgg----g-------tgg-------tt----g-----c--g-aaggct-ggg-tct
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               6497 19 +      8564 ga----gcag-a--a-----agcaga--------------------------tgg----g-------t----------------------------------------
i Saguinus_labiatus.k141_285685                          C 0 I 104
s Saguinus_midas.LG03                                    209467428 33 + 209938924 ----------ga--g-----agcaga--------------------------tgg----g-------tgg-------ct----g-----c--g-aggcct-ggg-tct
i Saguinus_midas.LG03                                    I 649 T 266
s Saguinus_mystax.k141_374627                                 5985 38 -      9399 ga----gcag-a--a-----agcaga--------------------------tgg----g-------tgg-------ct----t-----c--g-agggct-ggg-tct
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saguinus_oedipus.k141_161539                                 472  1 +      1573 g-----------------------------------------------------------------------------------------------------------
i Saguinus_oedipus.k141_161539                           C 0 N 0
s Saimiri_boliviensis.NW_024100920.1                     119949348 38 - 121099817 GA----ACG-GA--A-----AGCAGA--------------------------TGG----G-------TGG-------CT----G-----C--A-AGGGCT-GGG-TCT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       21804 38 +     46362 ga----acg-ga--a-----agcaga--------------------------tgg----g-------tgg-------ct----g-----c--a-agggct-ggg-tct
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               21899 38 +     45824 ga----acg-ga--a-----agcaga--------------------------tgg----g-------tgg-------ct----g-----c--a-agggct-ggg-tct
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             38527 38 -     64574 ga----acg-ga--a-----agcaga--------------------------tgg----g-------tgg-------tt----g-----c--a-agggct-ggg-tct
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               1533 38 -     23631 ga----acg-ga--a-----agcaga--------------------------tgg----g-------tgg-------tt----g-----c--a-agggct-ggg-tct
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 21792 38 -     61129 ga----acg-ga--a-----agcaga--------------------------tgg----g-------tgg-------ct----g-----c--a-agggct-ggg-tct
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          17659 19 -     19888 -----------------------------------------------------------------------------------gggcttc----agggct-ggg-tct
i Semnopithecus_entellus.k141_11662                      I 18 C 0
s Semnopithecus_hypoleucos.k141_1615806                      24862 19 +     39453 -----------------------------------------------------------------------------------gggctgc----agggct-ggg-tct
i Semnopithecus_hypoleucos.k141_1615806                  I 18 C 0
s Semnopithecus_schistaceus.k141_1584426                      4970 19 +      7198 -----------------------------------------------------------------------------------gggcttc----agggct-ggg-tct
i Semnopithecus_schistaceus.k141_1584426                 I 18 C 0
s Semnopithecus_johnii.k141_670120                            5370 18 +     27826 ga----aca-ga--a-----agcaga--------------------------tga----g------------------------------------------------
i Semnopithecus_johnii.k141_670120                       C 0 I 12
s Semnopithecus_priam.k141_638794                             4890 18 -     19483 ga----aca-ga--a-----agcaga--------------------------tga----g------------------------------------------------
i Semnopithecus_priam.k141_638794                        C 0 I 12
s Semnopithecus_vetulus.k141_1200928                         13212 18 +     15514 ga----aca-ga--a-----agcaga--------------------------tga----g------------------------------------------------
i Semnopithecus_vetulus.k141_1200928                     C 0 I 12
s Solenodon_paradoxus.SolPar_flattened_line_126               2818 39 +   1910179 ga----aca-ga--a-----agaaaa--------------------------tca----g-------tga-------tt----g-----c-ca-agagct-gag-tat
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1951767  3 -   3870691 ---------------------------------------------------------------------------------------------------------cac
i Spermophilus_dauricus.KZ294078.1                       I 299 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             29788 39 +     97271 ga----aca-ga--a-----agtaga--------------------------tta----c-------tgg-------tt----g-----c-ct-agggtt-gga-tct
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              17372 39 -    196729 ga----aga-ca--a-----cgcaca--------------------------tta----g-------tgg-------tt----g-----c-ct-agggct-ggg-tat
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.JH118708.1                                      34585 19 -     47482 aa----aaa-aa--g-----aacaga--------------------------tca----g-------t----------------------------------------
i Sus_scrofa.JH118708.1                                  C 0 I 2586
s Symphalangus_syndactylus.tarseq_199                      1091432 36 -   1523678 -a----aca-ga--a-----agcaga--------------------------tga----g-------tgg-------ct----g-----c----agggct-ggg-tct
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 9668 39 +     41958 ga----aca-ga--a-----aagaga--------------------------tca----a-------tgg-------tt----g-----ctc--aggacc-aca-tat
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 71217 29 +    116680 -----------------------------------------------------------cagatcactgc-------tt----t-----c-ca-ggagcc-agg-cat
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 10 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      117820 39 -    156842 ga----ata-ga--a-----agcaga--------------------------tca----g-------tgg-------tt----g-----t-ct-agggct-gga-tat
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    386273 39 +    539355 ga----ata-ga--a-----agcaga--------------------------tca----g-------tgg-------tt----g-----t-ct-agggct-gga-tat
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               24735 38 +     70052 ta----aca-ga--a-----gg-aga--------------------------tcg----g-------taa-------tt----g-----c-ca-agggct-ggg-cac
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_2029956                               4075 38 +      4644 ta----aca-ga--a-----gg-aga--------------------------tcg----g-------taa-------tt----g-----c-ca-agggct-ggg-cac
i Tarsius_wallacei.k141_2029956                          C 0 C 0
s Theropithecus_gelada.CM009954.1                        186426538 37 + 186847797 GA----ACA-GA--A-----AGCGGA--------------------------TGA----G-------GGG-------CT----G-----C----AGGGCT-GGG-TCT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     79995 39 +    610378 ga----aca-ga--a-----agcaga--------------------------ccg----g-------tgg-------ct----g-----c-cc-tggagt-gca-cac
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          8943 19 -     20410 gg----aca-ga--a-----agcaga--------------------------cga----g-------g----------------------------------------
i Trachypithecus_auratus.k141_722599                     C 0 I 10
s Trachypithecus_crepusculus.k141_1194022                    13137 18 +     15221 gg----aca-ga--a-----agcaga--------------------------tga----g------------------------------------------------
i Trachypithecus_crepusculus.k141_1194022                C 0 I 14
s Trachypithecus_cristatus.k141_580354                        9044 19 +     19930 gg----aca-ga--a-----agcaga--------------------------cga----g-------g----------------------------------------
i Trachypithecus_cristatus.k141_580354                   C 0 I 10
s Trachypithecus_francoisi.k141_1412647                       5473 18 -     19997 gg----aca-ga--a-----agcaga--------------------------tga----g------------------------------------------------
i Trachypithecus_francoisi.k141_1412647                  C 0 I 10
s Trachypithecus_geei.k141_277701                            45594 37 -     60166 ga----aca-ga--a-----agcaga--------------------------tga----g-------ggg-------ct----g-----c----agggct-ggg-tct
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        13066 19 -     27529 gg----aca-ga--a-----agcaga--------------------------cga----g-------g----------------------------------------
i Trachypithecus_germaini.k141_912491                    C 0 I 10
s Trachypithecus_hatinhensis.k141_143409                     13007 18 -     18194 gg----aca-ga--a-----agcaga--------------------------tga----g------------------------------------------------
i Trachypithecus_hatinhensis.k141_143409                 C 0 I 14
s Trachypithecus_laotum.k141_907409                           6740 16 -     21137 gg----aca-ga--a-----agcaga--------------------------tg------------------------------------------------------
i Trachypithecus_laotum.k141_907409                      C 0 I 12
s Trachypithecus_leucocephalus.k141_587342                    5443 18 -     10723 gg----aca-ga--a-----agcaga--------------------------tga----g------------------------------------------------
i Trachypithecus_leucocephalus.k141_587342               C 0 I 10
s Trachypithecus_melamera.k141_434728                         4595 18 +      9834 gg----aca-ga--a-----agcaga--------------------------tga----g------------------------------------------------
i Trachypithecus_melamera.k141_434728                    C 0 I 14
s Trachypithecus_obscurus.k141_190785                        22911 24 +     32220 gg----aca-ga--a-----agcaga--------------------------cga----g-------ggg-------ct----g------------------------
i Trachypithecus_obscurus.k141_190785                    C 0 I 5
s Trachypithecus_phayrei.ctg124                            5937010 18 +   6242583 gg----aca-ga--a-----agcaga--------------------------tga----g------------------------------------------------
i Trachypithecus_phayrei.ctg124                          C 0 I 14
s Trachypithecus_pileatus.k141_2007326                        6259 37 +     20839 ga----aca-ga--a-----agcaga--------------------------tga----g-------ggg-------ct----g-----c----agggct-ggg-tct
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2154299 27 +   4065304 --------------a-----agcaga--------------------------tta----g-------tga-------ct----g-----t-ca-aagttt-g------
i Tupaia_chinensis.KB320699.1                            I 7 I 5
s Tupaia_tana.TupTan_flattened_line_97126                     7951 27 -     10553 --------------a-----agcaga--------------------------tta----g-------tga-------ct----g-----t-ca-aagtct-g------
i Tupaia_tana.TupTan_flattened_line_97126                I 3 I 1
s Ursus_maritimus.KK499267.1                               4849483 39 -   5085361 ga----aca-ga--a-----agcaga--------------------------tca----c-------tgg-------tt----g-----c-ct-agagct-gga-tat
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  10053 38 +     50397 ga----ata-ga--a-----agcaga--------------------------tga----g-------tgg-------cc----g-----t-ca-agggct--gg-cat
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             10108 38 +     24756 ga----ata-ga--a-----agcaga--------------------------tga----g-------tgg-------cc----g-----t-ca-agggct--gg-cat
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5370935 38 -   5488506 ga----aca-aa--a-----aacaaa--------------------------tca----g-------ttt-------tt----g-----c-ca-ca-gct-gcg-ggt
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  9853 39 -     43706 ta----aca-ga--a-----agcagc--------------------------tca----g-------tgg-------tt----g-----c-ct-agggct-gga-tat
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        22715  3 -     24430 ---------------------------------------------------------------------------------------------------------CAC
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          4221 39 +     86975 ga----aca-ga--a-----agcaga--------------------------tca----c-------tgg-------tt----g-----c-ct-aggact-gga-tat
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Echinops_telfairi.JH980293.1                            48779651 164 + 111700974 I
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Cebus_unicolor.k141_219506                                 14903  0 -     16904 I
e Cebus_olivaceus.k141_1000828                                1853 231 -      2944 I
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Loris_tardigradus.ctg83                                  1003049 50 +   6120653 I
e Loris_lydekkerianus.k141_2539221                            4210 50 +     11245 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52652  8 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   3750  9 +      8208 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Sorex_araneus.JH798187.1                                13649746  0 -  18376816 C
e Sigmodon_hispidus.SigHis_scaffold_60841                    11304  0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152480  8 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Ondatra_zibethicus.OndZib_scaffold_46174                   22267 24 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105748664 47 + 199412804 I
e Nycticebus_coucang.k141_771082                                88 47 -      2667 I
e Nycticebus_bengalensis.LG01                            102578243 47 - 196305487 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11258701  7 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50341  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352  0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Ellobius_talpinus.LOJH01109367.1                            3704  7 -      6299 I
e Ellobius_lutescens.LOEQ01008920.1                          17650  7 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089466 1162 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            62283 174 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Crocidura_indochinensis.CroInd_scaffold_37019               1709  0 -     19598 C
e Condylura_cristata.JH655891.1                           17547413  8 -  53390261 I
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_713168             195  9 -      2554 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       4767 4 +     62944 CAGG
s Acinonyx_jubatus.LLWD01001279.1                           826396 4 -   1699592 cagg
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     68456 3 +     87051 -AAT
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 2
s Ailuropoda_melanoleuca.LNAT01000098.1                    9509660 4 -  29979442 caga
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             78441 4 -    347723 caaa
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     72717 3 -     89534 -agg
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 2
s Allenopithecus_nigroviridis.k141_3361533                   12680 4 -     52922 cagg
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         12623 4 -     28001 cagg
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          3069 4 -     18505 cagg
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           3918 4 -     12518 cagg
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                              1483 4 -     27731 cagg
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                1608 4 +      3134 cagg
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               1743 4 -     45847 cagg
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                22949 4 +     25266 cagg
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           2133 4 +      2906 cagg
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            16246 4 -     18578 cagg
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              1633 4 +     47717 cagg
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             1763 4 -      3544 cagg
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             12983 4 +     50774 cagg
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184173 4 +    412891 caag
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  13605 4 -     33861 cagg
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            13625 4 -     34016 cagg
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4296022 4 -   5030052 CAGG
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             13627 4 -     34685 cagg
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               26748 4 -     47192 cagg
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      10559 4 +     20879 caag
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                        9840 4 +     14667 cagg
i Arctocebus_calabarensis.k141_2318572                   I 16 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3585 4 +     43469 taag
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  52366 4 -     92717 caag
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              52995 4 +     85213 caag
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             3365 4 -     10423 cggg
i Callibella_humilis.k141_1278103                        C 0 I 5
s Callimico_goeldii.k141_1091182                             22866 4 +     31915 ctgg
i Callimico_goeldii.k141_1091182                         C 0 I 5
s Callithrix_geoffroyi.k119_512088                            3335 4 +      5267 cggg
i Callithrix_geoffroyi.k119_512088                       C 0 I 5
s Callithrix_jacchus.pat_scaffold_3                       23588549 4 - 189096842 CGGG
i Callithrix_jacchus.pat_scaffold_3                      C 0 I 5
s Callithrix_kuhlii.k119_1164682                             10079 4 -     12001 cggg
i Callithrix_kuhlii.k119_1164682                         C 0 I 5
s Camelus_bactrianus.KN276810.1                           10001487 4 -  17673402 cagg
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2333945 4 -   7040546 cagg
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  402228 4 -   1652518 cagg
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17798276 4 -  60362399 cagg
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184333 4 -    185531 cagg
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9033719 4 -   9314153 cagg
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17957984 4 -  59632846 cagg
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18499496 4 +  63665305 cagg
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           154651 2 -    496798 T--G
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                3947 4 -     11696 caag
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    136246 4 +    179628 gaca
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 2
s Catagonus_wagneri.CatWag_scaffold_2839                     92111 4 +    217609 cagg
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          7989 4 -     11392 cggg
i Cebuella_niveiventris.k141_1251222                     C 0 I 5
s Cebuella_pygmaea.k141_1309012                               4087 4 -      7577 cggg
i Cebuella_pygmaea.k141_1309012                          C 0 I 5
s Cephalopachus_bancanus.k141_1423433                         4161 2 +     31688 t--g
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12230536 4 +  27778364 aagg
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1563 4 -     25243 aagg
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4473635 3 +   4669795 CA-G
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        12184 3 -     19203 ca-g
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           6606 3 +      8260 ca-g
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           6832 3 +     27781 ca-g
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         6990 4 -     20310 cggg
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           9969 4 +     29689 cggg
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            4400 4 +      9989 cagg
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          12648 4 -     27936 cagg
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            1514 4 -     17152 cagg
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38815052 4 +  39242232 cagg
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21220743 4 -  21565898 cagg
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       37861 4 -     53127 cagg
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        5132 4 +      7159 cagg
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       12664 4 -     27947 cagg
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         12637 4 +     17596 cagg
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          1871 4 +     26000 cagg
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             19775 4 -     52598 cagg
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           15126 4 +     57038 cagg
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           9323 4 +     11226 CGGG
i Chiropotes_albinasus.k141_2813271                      C 0 T 228
s Chlorocebus_aethiops.ctg25                              18426621 4 -  18827391 cagg
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       13058 4 -     50209 cagg
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135420058 4 + 135778131 CAGG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 16962 4 +     19366 cagg
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            172062 4 +    839153 cagg
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1908572 4 +   2368649 CAGG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199948251 4 + 200372422 cagg
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              35110 4 +     84244 cagg
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          13411 4 -     20389 cagg
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 48143 3 +     63868 -AAT
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 2
s Cricetulus_griseus.LT883664.1                           11665472 3 + 224834208 -gat
i Cricetulus_griseus.LT883664.1                          C 0 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27573 4 -     87169 cagg
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    835806 4 +   1526836 CAAG
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 488 C 0
s Daubentonia_madagascariensis.ctg71                      12535991 4 -  12879189 cagg
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8628963 4 +  20541912 gaag
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672386 4 +   1390856 aagg
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    5139 4 +    198055 aagg
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE759718.1                                   9616 4 +     11740 caga
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Enhydra_lutris.KZ291758.1                               16328409 4 -  41312741 caaa
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144527 4 -  14770903 taag
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1282448 4 +   4378816 cagg
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18530269 4 -  39960074 ccgg
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               32284 4 +    498745 ccgg
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21203229 4 -  21539334 cagg
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              12471 4 -     14127 caag
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                5169 4 -     16928 caag
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              14198 4 -     25546 caag
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            11396 4 +     26330 caag
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 12636 4 +     23973 caag
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                11396 4 +     75513 caag
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  9338 4 +     97555 caag
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            12253 4 +     26496 caag
i Eulemur_rubriventer.k141_571033                        I 5 C 0
s Eulemur_rufus.k141_1476633                                  2871 4 -     17153 caag
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              12447 4 +    111500 caag
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Galago_moholi.ctg2040                                     424791 4 -    453645 cagg
i Galago_moholi.ctg2040                                  I 16 C 0
s Galago_senegalensis.k141_631886                             2498 4 +     11339 cagg
i Galago_senegalensis.k141_631886                        I 16 C 0
s Galagoides_demidoff.k141_1959596                            6306 4 +      6795 caga
i Galagoides_demidoff.k141_1959596                       I 16 C 0
s Galeopterus_variegatus.GalVar_scaffold_197845               2710 4 -      3123 cagg
i Galeopterus_variegatus.GalVar_scaffold_197845          C 0 C 0
s Gorilla_beringei.k141_3596273                              14019 4 -     32273 cagg
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186336167 4 + 186649187 cagg
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           5526 4 -     19426 cagg
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             10675 4 -     15286 cagg
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             12314 4 +     18253 cagg
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         12415 4 -     41752 cagg
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         12253 4 -     16460 cagg
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               241410 4 +    327341 cagg
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_403422                 716 4 -       893 caga
i Heterohyrax_brucei.HetBruBak_scaffold_403422           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       110883 4 +   1711038 cagg
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               42312 4 +     43066 cggg
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    432833 4 +    630532 cagg
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  43549 4 +     55795 cagg
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_232023                                 599 4 -     12752 cagg
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                                643 4 +     14092 cagg
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189541426 4 - 191637585 cagc
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3334320 4 -  11177569 cagc
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7518577 4 -   7955117 ctag
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   21218 4 +     31101 cagg
i Indri_indri.k141_3655594                               C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_50988                    12401 4 +     29960 taag
i Lasiurus_borealis.LasBor_scaffold_50988                I 39 C 0
s Lemur_catta.scaffold_24                                 15522758 4 -  30322482 cagg
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_illigeri.k141_3350179                           2902 4 +      4941 CGGG
i Leontocebus_illigeri.k141_3350179                      I 152 C 0
s Leontocebus_nigricollis.k141_4610752                        5618 4 +     35603 cggg
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    27121 4 +     38576 cggg
i Leontopithecus_chrysomelas.k141_1519602                C 0 I 38
s Leontopithecus_rosalia.k141_464620                         23818 4 +     66356 cggg
i Leontopithecus_rosalia.k141_464620                     C 0 I 38
s Lepilemur_ankaranensis.k141_596936                          9666 4 -     23766 cggg
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             27732 4 +     45836 cggg
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                           257 4 +     25010 cagg
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      25668 4 +     54090 cggg
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3041946 4 +   3914936 taga
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     4619 4 -     14121 cagg
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1435182 3 +   1826925 ca-g
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                            4216065 4 -  43346337 caga
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17954224 4 -  59628241 cagg
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               4997 3 +     40492 ca-g
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59674259 3 +  60120075 ca-g
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 10753 3 -     26193 ca-g
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            78557 3 -    114318 ca-g
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  4256 3 -     23192 ca-g
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                13717 3 -     29190 ca-g
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  22283 3 +     37952 ca-g
i Macaca_maura.k141_2733130                              I 16 C 0
s Macaca_mulatta.NC_041758.1                             186837372 3 + 187317192 CA-G
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25455934 3 -  25927173 CA-G
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  78133 3 +     89720 ca-g
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 5130 3 +     20474 ca-g
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   4931 3 -     14993 ca-g
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  327802 3 -    668171 ca-g
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 3242 3 -     24072 ca-g
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               23871 3 -     45290 ca-g
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 89708 4 +     94391 gaga
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23935455 3 -  24302211 ca-g
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               349587 3 +    752769 ca-g
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33100881 4 -  40650429 ctag
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         9428 4 -    207569 caag
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              9126 4 +     13704 caaa
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 30761 3 +    140813 -AAT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 2
s Mesocricetus_auratus.KB708134.1                         12180536 3 -  29670104 -aat
i Mesocricetus_auratus.KB708134.1                        C 0 I 1
s Mico_argentatus.k141_1239457                                3904 4 -      7380 cggg
i Mico_argentatus.k141_1239457                           C 0 I 5
s Mico_humeralifer.k141_1976199                               2977 4 +     18990 cggg
i Mico_humeralifer.k141_1976199                          C 0 I 5
s Mico_schneideri.k141_1950671                                      3916 4 -      7356 cggg
i Mico_schneideri.k141_1950671                                 C 0 I 5
s Microcebus_murinus.CM007674.1                           18290170 4 -  93316391 CAGG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                14493 4 -     19307 caag
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849758 3 +   8254450 aca-
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             33435 3 +     64694 aca-
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           7178 4 -     28506 cagg
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         4814 4 -      8324 taga
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      7727 4 -     37649 cagg
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140411 4 -    366855 caaa
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   34522 4 +     37127 cagg
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5600 4 +     14753 taag
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84359174 3 - 120012414 -aat
i Mus_caroli.LT608237.1                                  C 0 I 2
s Mus_musculus.chr8                                       87648158 3 - 129401213 -aat
i Mus_musculus.chr8                                      C 0 I 2
s Mus_pahari.LT608297.1                                   31352820 3 -  89631738 -aat
i Mus_pahari.LT608297.1                                  C 0 I 2
s Mus_spretus.CM004101.1                                  90750236 3 - 130317789 -aat
i Mus_spretus.CM004101.1                                 C 0 I 2
s Mustela_putorius.JH418006.1                               300303 4 -  14710649 caaa
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                278772 4 -  10118263 taag
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1586471 4 -   6019432 taag
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902536 4 -   4330536 taag
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        33096 4 +     33610 taag
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187890 4 +    196477 cagg
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nasalis_larvatus.k141_413338                               13173 4 +     21681 cagg
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306072 4 +  31847680 taga
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9148482 4 -   9404916 cagg
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Ochotona_princeps.JH802162.1                             1361698 4 +   3988456 cagg
i Ochotona_princeps.JH802162.1                           I 17 C 0
s Odobenus_rosmarus.KB229312.1                              505752 4 -   2017862 taga
i Odobenus_rosmarus.KB229312.1                           I 18 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    77384 3 +    102263 -AAT
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 2
s Oryctolagus_cuniculus.CM000791.1                        67145464 4 + 174332312 cagg
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       461446 4 -    559221 cagg
i Otocyon_megalotis.JAEUCK010005147.1                    I 18 C 0
s Otolemur_crassicaudatus.k141_222918                         2332 4 +      8798 cagg
i Otolemur_crassicaudatus.k141_222918                    I 15 C 0
s Otolemur_garnettii.GL873799.1                             694497 4 -   1103335 CAGG
i Otolemur_garnettii.GL873799.1                          I 15 C 0
s Pan_paniscus.KQ411613.1                                    42115 4 +     80009 CAGG
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189141027 4 + 189151597 CAGG
i Pan_troglodytes.CM009242.2                             I 186 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  150275 4 +    230217 cagg
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                263480 4 +  18783137 cagg
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4720118 4 -   8748460 cagg
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183441209 3 + 183742232 CA-G
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             4903 3 +     20448 ca-g
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20561711 3 +  20919399 ca-g
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   3647 3 +     41871 ca-g
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     6932 3 +     27711 ca-g
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  7012 3 +      9205 ca-g
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11738 4 -     78924 cagg
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            8477 4 +     13100 cagg
i Perodicticus_ibeanus.k141_855320                       I 16 C 0
s Perodicticus_potto.k141_1092580                             6879 4 +     25941 cagg
i Perodicticus_potto.k141_1092580                        I 16 C 0
s Peromyscus_maniculatus.KI615324.1                       18191987 3 -  18517816 -GAT
i Peromyscus_maniculatus.KI615324.1                      C 0 I 2
s Piliocolobus_badius.k141_1234363                           41670 4 +     62158 cagg
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        36401 4 +     89929 cagg
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            37817 4 +     51399 cagg
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14294055 4 -  14605196 CAGG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              903 4 +     22620 taag
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189129149 4 + 189387572 CAGG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9568757 4 +   9816681 cagg
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               71341 4 -     81375 cagg
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              3161 4 +     19060 cagg
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 11716 4 -     22811 caga
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2595436 4 -   4620579 CAGG
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     989420 4 +   2598838 CAAG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          27730 4 +     38485 caag
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             3890 4 +      4256 caag
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          25243 4 +     35766 caag
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           3425 4 -     24134 caag
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        27247 4 -     67325 caag
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           3483 4 -      6182 caag
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             8403 3 -     21651 -aat
i Psammomys_obesus.NESX01036370.1                        C 0 I 2
s Pteronotus_parnellii.KE909381.1                            13789 4 -     21811 caag
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39325 4 +     42204 caaa
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22975872 4 +  28871421 caga
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1358958 4 +   4952924 caga
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20273394 4 -  38429054 cagg
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             13172 4 -     91421 cagg
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7607298 4 +   7812017 cagg
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             13146 4 -     72585 cagg
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53568241 3 +  90668790 -AAT
i Rattus_norvegicus.chr16                                C 0 I 2
s Rhinopithecus_bieti.k119_217274                             4853 4 -     11128 cagg
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91234209 4 - 195417433 CAGG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7669858 4 +   7961872 cagg
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                86890 4 -     96226 caga
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               6386 4 -      8359 CGGG
i Saguinus_bicolor.k141_2619299                          I 383 C 0
s Saguinus_imperator.k141_717981                              5946 4 -      6207 cggg
i Saguinus_imperator.k141_717981                         C 0 C 0
s Saguinus_inustus.k141_699149                               11673 4 +     13640 cgcg
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_midas.LG03                                    209467195 4 + 209938924 cggg
i Saguinus_midas.LG03                                    T 266 C 0
s Saguinus_mystax.k141_374627                                 6023 4 -      9399 gggg
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119949386 4 - 121099817 CAGG
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       21842 4 +     46362 cagg
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               21937 4 +     45824 cagg
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             38565 4 -     64574 cagg
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               1571 4 -     23631 cagg
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 21830 4 -     61129 cagg
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          17678 4 -     19888 cagg
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      24881 4 +     39453 cagg
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            5400 4 +     27826 cagg
i Semnopithecus_johnii.k141_670120                       I 12 C 0
s Semnopithecus_priam.k141_638794                             4920 4 -     19483 cagg
i Semnopithecus_priam.k141_638794                        I 12 C 0
s Semnopithecus_schistaceus.k141_1584426                      4989 4 +      7198 cagg
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         13242 4 +     15514 cagg
i Semnopithecus_vetulus.k141_1200928                     I 12 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               2857 4 +   1910179 cagg
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1951770 4 -   3870691 ctag
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             29827 4 +     97271 caaa
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              17411 4 -    196729 cagg
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6809608 4 +  69701581 CAAG
i Sus_scrofa.CM000828.4                                  n 2586 C 0
s Symphalangus_syndactylus.tarseq_199                      1091468 4 -   1523678 cagg
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 9707 4 +     41958 caag
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 71246 4 +    116680 cagg
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      117859 4 -    156842 cagg
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    386312 4 +    539355 cagg
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               24773 2 +     70052 t--g
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_2029956                               4113 2 +      4644 t--g
i Tarsius_wallacei.k141_2029956                          C 0 C 0
s Theropithecus_gelada.CM009954.1                        186426575 3 + 186847797 CA-G
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     80034 4 +    610378 gcag
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          8972 4 -     20410 cagg
i Trachypithecus_auratus.k141_722599                     I 10 C 0
s Trachypithecus_crepusculus.k141_1194022                    13169 4 +     15221 cagg
i Trachypithecus_crepusculus.k141_1194022                I 14 C 0
s Trachypithecus_cristatus.k141_580354                        9073 4 +     19930 cagg
i Trachypithecus_cristatus.k141_580354                   I 10 C 0
s Trachypithecus_francoisi.k141_1412647                       5501 4 -     19997 cagg
i Trachypithecus_francoisi.k141_1412647                  I 10 C 0
s Trachypithecus_geei.k141_277701                            45631 4 -     60166 cagg
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        13095 4 -     27529 cagg
i Trachypithecus_germaini.k141_912491                    I 10 C 0
s Trachypithecus_hatinhensis.k141_143409                     13039 4 -     18194 cagg
i Trachypithecus_hatinhensis.k141_143409                 I 14 C 0
s Trachypithecus_laotum.k141_907409                           6768 4 -     21137 cagg
i Trachypithecus_laotum.k141_907409                      I 12 C 0
s Trachypithecus_leucocephalus.k141_587342                    5471 4 -     10723 cagg
i Trachypithecus_leucocephalus.k141_587342               I 10 C 0
s Trachypithecus_melamera.k141_434728                         4627 4 +      9834 cagg
i Trachypithecus_melamera.k141_434728                    I 14 C 0
s Trachypithecus_obscurus.k141_190785                        22940 4 +     32220 cagg
i Trachypithecus_obscurus.k141_190785                    I 5 C 0
s Trachypithecus_phayrei.ctg124                            5937042 4 +   6242583 cagg
i Trachypithecus_phayrei.ctg124                          I 14 C 0
s Trachypithecus_pileatus.k141_2007326                        6296 4 +     20839 cagg
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2154331 4 +   4065304 cagg
i Tupaia_chinensis.KB320699.1                            I 5 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     7979 4 -     10553 caag
i Tupaia_tana.TupTan_flattened_line_97126                I 1 C 0
s Ursus_maritimus.KK499267.1                               4849522 4 -   5085361 caga
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  10091 4 +     50397 cagg
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             10146 4 +     24756 cagg
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5370973 4 -   5488506 cagg
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  9892 4 -     43706 cagg
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        22718 4 -     24430 CTAG
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          4260 4 +     86975 taga
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Echinops_telfairi.JH980293.1                            48779651 164 + 111700974 I
e Sapajus_macrocephalus.k141_351809                          54316 0 -     80660 C
e Sapajus_apella.ctg103                                    5419275 0 -   5703754 C
e Saguinus_labiatus.k141_285685                               6516 104 +      8564 I
e Leontocebus_fuscicollis.k141_1820339                        5657 41 +     64341 I
e Cebus_unicolor.k141_219506                                 14903 0 -     16904 I
e Cebus_olivaceus.k141_1000828                                1853 231 -      2944 I
e Cebus_albifrons.Contig27                                25650611 0 +  26074798 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Loris_tardigradus.ctg83                                  1003049 50 +   6120653 I
e Loris_lydekkerianus.k141_2539221                            4210 50 +     11245 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52652 8 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   3750 9 +      8208 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937 0 +    114563 C
e Sorex_araneus.JH798187.1                                13649746 0 -  18376816 C
e Sigmodon_hispidus.SigHis_scaffold_60841                    11304 0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152480 8 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813 0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Orycteropus_afer.OryAfe_flattened_line_144387               9003 16 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Ondatra_zibethicus.OndZib_scaffold_46174                   22267 24 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105748664 47 + 199412804 I
e Nycticebus_coucang.k141_771082                                88 47 -      2667 I
e Nycticebus_bengalensis.LG01                            102578243 47 - 196305487 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Nannospalax_galili.AXCS01343547.1                            805 0 +       996 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11258701 7 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    20898 16 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50341 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352 0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547 0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  8618 0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20195104 0 + 205367284 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Ellobius_talpinus.LOJH01109367.1                            3704 7 -      6299 I
e Ellobius_lutescens.LOEQ01008920.1                          17650 7 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089466 1162 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084 0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            62283 174 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Crocidura_indochinensis.CroInd_scaffold_37019               1709 0 -     19598 C
e Condylura_cristata.JH655891.1                           17547413 8 -  53390261 I
e Chinchilla_lanigera.JH722012.1                           1251498 0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_713168             195 9 -      2554 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99291 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157 0 -  23392119 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       4771  5 +     62944 AA------AGA
s Acinonyx_jubatus.LLWD01001279.1                           826400  4 -   1699592 -g------agt
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     68461  5 +     87051 AG------ATG
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 2 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9509664  4 -  29979442 -g------agc
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             78445  4 -    347723 -c------agt
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     72722  5 -     89534 CA------ATA
i Allactaga_bullata.AllBul_scaffold_9566                 I 2 C 0
s Allenopithecus_nigroviridis.k141_3361533                   12684  5 -     52922 gg------aga
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         12627  5 -     28001 gg------aga
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          3073  5 -     18505 gg------aga
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           3922  5 -     12518 gg------aga
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                              1487  4 -     27731 ga-------ga
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                1612  4 +      3134 ga-------ga
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               1747  4 -     45847 ga-------ga
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                22953  4 +     25266 ga-------ga
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           2137  4 +      2906 ga-------ga
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            16250  4 -     18578 ga-------ga
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              1637  4 +     47717 ga-------ga
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             1767  4 -      3544 ga-------ga
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             12987  4 +     50774 ga-------ga
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184177  4 +    412891 gg------a-t
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  13609  5 -     33861 gg------aga
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            13629  5 -     34016 gg------aga
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4296026  5 -   5030052 GG------AGA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             13631  5 -     34685 gg------aga
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               26752  5 -     47192 gg------aga
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      10563 11 +     20879 gactcagtatc
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 2
s Arctocebus_calabarensis.k141_2318572                        9844  4 +     14667 at------t-t
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3589  5 +     43469 ga------agt
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  52370  5 -     92717 gt------tgt
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              52999  5 +     85213 gt------tgt
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Camelus_bactrianus.KN276810.1                           10001491  5 -  17673402 ga------agt
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2333949  5 -   7040546 ga------agt
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  402232  5 -   1652518 ga------agt
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17798280  4 -  60362399 -g------agt
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184337  4 -    185531 -g------agt
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9033723  4 -   9314153 -g------agt
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17957988  4 -  59632846 -g------agt
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18499500  4 +  63665305 -g------agt
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           154653  5 -    496798 GG------AGC
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                3951  5 -     11696 gg------agt
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    136252  5 +    179628 aa------att
i Castor_canadensis.CasCan_scaffold_2074                 I 2 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     92115  5 +    217609 gg------agt
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         4163  5 +     31688 gg------agt
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12230540  5 +  27778364 gc------agt
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1567  5 -     25243 gc------agt
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4473638  5 +   4669795 GG------AGA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        12187  5 -     19203 gg------aga
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           6609  5 +      8260 gg------aga
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           6835  5 +     27781 gg------aga
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         6994  5 -     20310 gg------aga
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           9973  5 +     29689 gg------aga
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            4404  5 +      9989 gg------aga
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          12652  5 -     27936 gg------aga
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            1518  5 -     17152 gg------aga
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38815056  5 +  39242232 gt------aga
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21220747  5 -  21565898 gg------aga
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       37865  5 -     53127 gg------aga
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        5136  5 +      7159 gg------aga
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       12668  5 -     27947 gg------aga
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         12641  5 +     17596 gg------aga
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          1875  5 +     26000 gg------aga
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             19779  5 -     52598 gt------tgt
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           15130  5 +     57038 gt------tgt
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           9099  5 +     11226 GG------AGA
i Chiropotes_albinasus.k141_2813271                      T 228 C 0
s Chlorocebus_aethiops.ctg25                              18426625  5 -  18827391 gg------aga
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       13062  5 -     50209 gg------aga
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135420062  5 + 135778131 GG------AGA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 16966  5 +     19366 gg------agt
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            172066  5 +    839153 gg------agt
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1908576  5 +   2368649 GG------AGA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199948255  5 + 200372422 gg------aga
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              35114  5 +     84244 ga------aga
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          13415  5 -     20389 ga------agt
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 48148  5 +     63868 AA------ATT
i Cricetomys_gambianus.CriGam_scaffold_18520             I 2 C 0
s Cricetulus_griseus.LT883664.1                           11665476  2 + 224834208 ---------at
i Cricetulus_griseus.LT883664.1                          I 1 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27577  4 -     87169 -g------act
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    835810  5 +   1526836 GA------AGT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12535995  5 -  12879189 gt------tgt
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8628967  5 +  20541912 gg------agt
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672390  5 +   1390856 gc------agt
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    5143  5 +    198055 gt------agt
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE759718.1                                   9620  5 +     11740 gg------agt
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Enhydra_lutris.KZ291758.1                               16328413  4 -  41312741 -g------agt
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144531  5 -  14770903 gg------agt
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1282452  5 +   4378816 gg------aat
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18530273  5 -  39960074 gg------aat
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               32288  5 +    498745 gg------aat
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21203233  5 -  21539334 ag------aga
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              12475  5 -     14127 gt------tgt
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                5173  5 -     16928 gt------tgt
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              14202  5 -     25546 gt------tgt
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            11400  5 +     26330 gt------tgt
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 12640  5 +     23973 gt------tgt
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                11400  5 +     75513 gt------tgt
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  9342  5 +     97555 gt------tgt
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            12257  5 +     26496 gt------tgt
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  2875  5 -     17153 gt------tgt
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              12451  5 +    111500 gt------tgt
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Galago_moholi.ctg2040                                     424795  4 -    453645 gt------t-g
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             2502  4 +     11339 gt------t-g
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1959596                            6310  4 +      6795 gt------t-g
i Galagoides_demidoff.k141_1959596                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_197845               2714  5 -      3123 gg------agt
i Galeopterus_variegatus.GalVar_scaffold_197845          C 0 C 0
s Gorilla_beringei.k141_3596273                              14023  5 -     32273 aa------aga
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186336171  5 + 186649187 aa------aga
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           5530  5 -     19426 ct------tgg
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             10679  5 -     15286 ct------tgg
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             12318  5 +     18253 ct------tgg
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         12419  5 -     41752 ct------tgg
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         12257  5 -     16460 ct------tgg
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               241414  4 +    327341 -g------acc
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_403422                 720  5 -       893 gg------gaC
i Heterohyrax_brucei.HetBruBak_scaffold_403422           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       110887  5 +   1711038 gg------agt
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               42316  5 +     43066 gg------agt
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    432837  5 +    630532 ga------agg
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  43553  4 +     55795 -a------agt
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_232023                                 603  5 -     12752 ga------aga
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                                647  5 +     14092 ga------aga
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189541430  5 - 191637585 ga------aga
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3334324  5 -  11177569 ga------aga
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7518581  5 -   7955117 gc------atc
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 2
s Indri_indri.k141_3655594                                   21222  5 +     31101 gt------tgt
i Indri_indri.k141_3655594                               C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_50988                    12405  5 +     29960 gg------agt
i Lasiurus_borealis.LasBor_scaffold_50988                C 0 I 2
s Lemur_catta.scaffold_24                                 15522762  5 -  30322482 gt------tgg
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_illigeri.k141_3350179                           2906  5 +      4941 GG------AGA
i Leontocebus_illigeri.k141_3350179                      C 0 I 114
s Leontocebus_nigricollis.k141_4610752                        5622  5 +     35603 gg------aga
i Leontocebus_nigricollis.k141_4610752                   C 0 I 114
s Leontopithecus_chrysomelas.k141_1519602                    27163  5 +     38576 ag------aga
i Leontopithecus_chrysomelas.k141_1519602                I 38 C 0
s Leontopithecus_rosalia.k141_464620                         23860  5 +     66356 AG------AGA
i Leontopithecus_rosalia.k141_464620                     I 38 C 0
s Lepilemur_ankaranensis.k141_596936                          9670  5 -     23766 gt------tgt
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             27736  5 +     45836 gt------tgt
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                           261  5 +     25010 gt------tgt
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      25672  5 +     54090 gt------tgt
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3041950  4 +   3914936 -g------agt
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     4623  4 -     14121 ga------a-a
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1435185  5 +   1826925 gg------aga
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                            4216069  5 -  43346337 gg------agt
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17954228  4 -  59628241 -g------agt
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               5000  5 +     40492 gg------aga
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59674262  5 +  60120075 cg------gga
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 10756  5 -     26193 gg------aga
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            78560  5 -    114318 gg------aga
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  4259  5 -     23192 gg------aga
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                13720  5 -     29190 gg------aga
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  22286  5 +     37952 gg------aga
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186837375  5 + 187317192 GG------AGA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25455937  5 -  25927173 GG------AGA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  78136  5 +     89720 gg------aga
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 5133  5 +     20474 cg------gga
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   4934  5 -     14993 gg------aga
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  327805  5 -    668171 gg------aga
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 3245  5 -     24072 gg------gga
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               23874  5 -     45290 gg------aga
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 89712  5 +     94391 gg------aat
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23935458  5 -  24302211 gg------aga
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               349590  5 +    752769 gg------aga
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33100885  5 -  40650429 cc------atc
i Marmota_marmota.CZRN01000018.1                         C 0 I 2
s Megaderma_lyra.MegLyr_scaffold_4542                         9432  5 -    207569 gg------agt
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              9130  4 +     13704 -g------agt
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 30766  5 +    140813 AG------ATT
i Meriones_unguiculatus.MerUng_scaffold_7390             I 2 C 0
s Mesocricetus_auratus.KB708134.1                         12180540  2 -  29670104 ---------tt
i Mesocricetus_auratus.KB708134.1                        I 1 C 0
s Microcebus_murinus.CM007674.1                           18290174  5 -  93316391 GG------TGT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                14497  5 -     19307 gg------agc
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miopithecus_ogouensis.k141_534055                           7182  5 -     28506 gg------aga
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         4818  4 -      8324 -g------agt
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      7731  5 -     37649 gt------tat
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140415  5 -    366855 gg------agt
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   34526  4 +     37127 -g------act
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5604  5 +     14753 gg------agt
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84359179  5 - 120012414 ag------att
i Mus_caroli.LT608237.1                                  I 2 C 0
s Mus_musculus.chr8                                       87648163  5 - 129401213 ag------att
i Mus_musculus.chr8                                      I 2 C 0
s Mus_pahari.LT608297.1                                   31352825  5 -  89631738 ag------att
i Mus_pahari.LT608297.1                                  I 2 C 0
s Mus_spretus.CM004101.1                                  90750241  5 - 130317789 ag------att
i Mus_spretus.CM004101.1                                 I 2 C 0
s Mustela_putorius.JH418006.1                               300307  4 -  14710649 -g------agt
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                278776  2 -  10118263 gg---------
i Myotis_brandtii.KE162005.1                             C 0 I 5
s Myotis_davidii.KB100139.1                                1586475  2 -   6019432 gg---------
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902540  2 -   4330536 gg---------
i Myotis_lucifugus.GL429869.1                            C 0 I 5
s Myotis_myotis.MyoMyo_scaffold_28916                        33100  2 +     33610 gg---------
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187894  5 +    196477 gg------agt
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nasalis_larvatus.k141_413338                               13177  5 +     21681 gg------aga
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306076  4 +  31847680 -g------agt
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9148486  4 -   9404916 -g------agt
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Ochotona_princeps.JH802162.1                             1361702  4 +   3988456 gg------a-a
i Ochotona_princeps.JH802162.1                           C 0 I 1
s Odobenus_rosmarus.KB229312.1                              505756  4 -   2017862 -g------agt
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    77389  5 +    102263 AG------ATT
i Onychomys_torridus.OnyTor_scaffold_2986                I 2 C 0
s Oryctolagus_cuniculus.CM000791.1                        67145468  4 + 174332312 ga------a-a
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 1
s Otocyon_megalotis.JAEUCK010005147.1                       461450  4 -    559221 -g------agt
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         2336  4 +      8798 gt------t-g
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             694501  4 -   1103335 GT------T-G
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    42119  5 +     80009 AA------AGA
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189141031  5 + 189151597 AA------AGA
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  150279  4 +    230217 -g------agc
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                263484  4 +  18783137 -g------agc
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4720122  4 -   8748460 -g------agc
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183441212  5 + 183742232 GG------AGA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             4906  5 +     20448 gg------aga
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20561714  5 +  20919399 gg------aga
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   3650  5 +     41871 gg------aga
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     6935  5 +     27711 gg------aga
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  7015  5 +      9205 gg------aga
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11742  4 -     78924 -g------agt
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            8481  4 +     13100 at------t-t
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             6883  4 +     25941 at------t-t
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18191992  5 -  18517816 AG------ATT
i Peromyscus_maniculatus.KI615324.1                      I 2 C 0
s Piliocolobus_badius.k141_1234363                           41674  5 +     62158 gg------aga
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        36405  5 +     89929 gg------aga
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            37821  5 +     51399 gg------aga
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14294059  5 -  14605196 GG------AGA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              907  5 +     22620 gg------agt
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189129153  5 + 189387572 GA------AGA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9568761  5 +   9816681 ga------aga
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               71345  5 -     81375 gg------aga
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              3165  5 +     19060 gg------aga
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 11720  5 -     22811 gg------gat
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2595440  5 -   4620579 GT------TGG
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     989424  5 +   2598838 GT------TGT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          27734  5 +     38485 gt------tgt
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             3894  5 +      4256 gt------tgt
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          25247  5 +     35766 gt------tgt
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           3429  5 -     24134 gt------tgt
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        27251  5 -     67325 gt------tgt
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           3487  5 -      6182 gt------tgt
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             8408  5 -     21651 ag------att
i Psammomys_obesus.NESX01036370.1                        I 2 C 0
s Pteronotus_parnellii.KE909381.1                            13793  5 -     21811 gc------agt
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39329  4 +     42204 -g------agt
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22975876  5 +  28871421 gg------agt
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1358962  5 +   4952924 gg------agt
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20273398  4 -  38429054 -g------agt
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             13176  5 -     91421 gg------aga
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7607302  5 +   7812017 gg------aga
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             13150  5 -     72585 gg------aga
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53568246  5 +  90668790 AG------GTT
i Rattus_norvegicus.chr16                                I 2 C 0
s Rhinopithecus_bieti.k119_217274                             4857  5 -     11128 gg------aga
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91234213  5 - 195417433 GG------AGA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7669862  5 +   7961872 gg------aga
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                86894  5 -     96226 gg------agt
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               6390  5 -      8359 GG------AGA
i Saguinus_bicolor.k141_2619299                          C 0 T 383
s Saguinus_imperator.k141_717981                              5950  5 -      6207 gg------aga
i Saguinus_imperator.k141_717981                         C 0 N 0
s Saguinus_inustus.k141_699149                               11677  5 +     13640 gg------aga
i Saguinus_inustus.k141_699149                           C 0 I 76
s Saguinus_midas.LG03                                    209467199  5 + 209938924 gg------aga
i Saguinus_midas.LG03                                    C 0 T 378
s Saguinus_mystax.k141_374627                                 6027  5 -      9399 gg------aga
i Saguinus_mystax.k141_374627                            C 0 I 152
s Saimiri_boliviensis.NW_024100920.1                     119949390  5 - 121099817 GG------CGA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       21846  5 +     46362 gg------cga
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               21941  5 +     45824 gg------cga
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             38569  5 -     64574 gg------cga
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               1575  5 -     23631 gg------cga
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 21834  5 -     61129 gg------cga
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          17682  5 -     19888 gg------aga
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      24885  5 +     39453 gg------aga
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            5404  5 +     27826 gg------aga
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             4924  5 -     19483 gg------aga
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      4993  5 +      7198 gg------aga
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         13246  5 +     15514 gg------aga
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               2861  5 +   1910179 gg------aaa
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1951774  5 -   3870691 gc------atc
i Spermophilus_dauricus.KZ294078.1                       C 0 I 2
s Spilogale_gracilis.SpiGra_flattened_line_13525             29831  4 +     97271 -g------agt
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              17415  4 -    196729 -g------act
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6809612  5 +  69701581 GG------AGT
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1091472  5 -   1523678 ga------aga
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 9711  5 +     41958 gg------agt
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 71250  5 +    116680 gg------agt
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      117863  5 -    156842 gg------agt
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    386316  5 +    539355 gg------agt
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               24775  5 +     70052 gg------agt
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_2029956                               4115  5 +      4644 gg------agt
i Tarsius_wallacei.k141_2029956                          C 0 C 0
s Theropithecus_gelada.CM009954.1                        186426578  5 + 186847797 GG------AGA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     80038  5 +    610378 gg------agt
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          8976  5 -     20410 gg------aga
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    13173  5 +     15221 gg------aga
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        9077  5 +     19930 gg------aga
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       5505  5 -     19997 gg------aga
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            45635  5 -     60166 gg------aga
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        13099  5 -     27529 gg------aga
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     13043  5 -     18194 gg------aga
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           6772  5 -     21137 gg------aga
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    5475  5 -     10723 gg------aga
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         4631  5 +      9834 gg------aga
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        22944  5 +     32220 gg------aga
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5937046  5 +   6242583 gg------aga
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        6300  5 +     20839 gg------aga
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2154335  5 +   4065304 gg------gat
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     7983  5 -     10553 gg------gat
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4849526  4 -   5085361 -g------agc
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  10095  5 +     50397 gt------tgt
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             10150  5 +     24756 gt------tgt
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5370977  5 -   5488506 ga------agt
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  9896  4 -     43706 -g------agt
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        22722  5 -     24430 GC------ATT
i Xerus_inauris.XerIna_scaffold_48378                    C 0 I 2
s Zalophus_californianus.ZalCal_flattened_line_17732          4264  4 +     86975 -g------agt
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Echinops_telfairi.JH980293.1                            48779651 164 + 111700974 I
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Saguinus_labiatus.k141_285685                               6516 104 +      8564 I
e Mico_schneideri.k141_1950671                                      3920  5 -      7356 I
e Mico_humeralifer.k141_1976199                               2981  5 +     18990 I
e Mico_argentatus.k141_1239457                                3908  5 -      7380 I
e Leontocebus_fuscicollis.k141_1820339                        5657 41 +     64341 I
e Cebus_unicolor.k141_219506                                 14903  0 -     16904 I
e Cebus_olivaceus.k141_1000828                                1853 231 -      2944 I
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Cebuella_pygmaea.k141_1309012                               4091  5 -      7577 I
e Cebuella_niveiventris.k141_1251222                          7993  5 -     11392 I
e Callithrix_kuhlii.k119_1164682                             10083  5 -     12001 I
e Callithrix_jacchus.pat_scaffold_3                       23588553  5 - 189096842 I
e Callithrix_geoffroyi.k119_512088                            3339  5 +      5267 I
e Callimico_goeldii.k141_1091182                             22870  5 +     31915 I
e Callibella_humilis.k141_1278103                             3369  5 -     10423 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Loris_tardigradus.ctg83                                  1003049 50 +   6120653 I
e Loris_lydekkerianus.k141_2539221                            4210 50 +     11245 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52652  8 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   3750  9 +      8208 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Sorex_araneus.JH798187.1                                13649746  0 -  18376816 C
e Sigmodon_hispidus.SigHis_scaffold_60841                    11304  0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152480  8 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orycteropus_afer.OryAfe_flattened_line_144387               9003 16 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Ondatra_zibethicus.OndZib_scaffold_46174                   22267 24 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105748664 47 + 199412804 I
e Nycticebus_coucang.k141_771082                                88 47 -      2667 I
e Nycticebus_bengalensis.LG01                            102578243 47 - 196305487 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33438  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849761  0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11258701  7 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    20898 16 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50341  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352  0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  8618  0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20195104  0 + 205367284 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Ellobius_talpinus.LOJH01109367.1                            3704  7 -      6299 I
e Ellobius_lutescens.LOEQ01008920.1                          17650  7 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089466 1162 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            62283 174 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Crocidura_indochinensis.CroInd_scaffold_37019               1709  0 -     19598 C
e Condylura_cristata.JH655891.1                           17547413  8 -  53390261 I
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_713168             195  9 -      2554 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       4776 2 +     62944 C--G
s Acinonyx_jubatus.LLWD01001279.1                           826404 2 -   1699592 a--t
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     68466 2 +     87051 A--A
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9509668 2 -  29979442 a--g
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             78449 2 -    347723 a--g
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     72727 2 -     89534 A--A
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   12689 2 -     52922 g--g
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         12632 2 -     28001 g--a
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          3078 2 -     18505 g--a
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           3927 2 -     12518 g--g
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                              1491 2 -     27731 g--g
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                1616 2 +      3134 g--g
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               1751 2 -     45847 g--g
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                22957 2 +     25266 g--g
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           2141 2 +      2906 g--g
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            16254 2 -     18578 g--g
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              1641 2 +     47717 g--g
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             1771 2 -      3544 g--g
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             12991 2 +     50774 g--g
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184181 2 +    412891 g--g
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  13614 2 -     33861 g--g
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            13634 2 -     34016 g--g
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4296031 2 -   5030052 G--G
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             13636 2 -     34685 g--g
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               26757 2 -     47192 g--g
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      10576 2 +     20879 g--a
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 2 C 0
s Arctocebus_calabarensis.k141_2318572                        9848 2 +     14667 g--g
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3594 2 +     43469 g--g
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  52375 2 -     92717 g--g
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              53004 2 +     85213 g--g
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             3374 2 -     10423 g--g
i Callibella_humilis.k141_1278103                        I 5 C 0
s Callimico_goeldii.k141_1091182                             22875 2 +     31915 g--g
i Callimico_goeldii.k141_1091182                         I 5 C 0
s Callithrix_geoffroyi.k119_512088                            3344 2 +      5267 g--g
i Callithrix_geoffroyi.k119_512088                       I 5 C 0
s Callithrix_jacchus.pat_scaffold_3                       23588558 2 - 189096842 G--G
i Callithrix_jacchus.pat_scaffold_3                      I 5 C 0
s Callithrix_kuhlii.k119_1164682                             10088 2 -     12001 g--g
i Callithrix_kuhlii.k119_1164682                         I 5 C 0
s Camelus_bactrianus.KN276810.1                           10001496 2 -  17673402 g--g
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2333954 2 -   7040546 g--g
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  402237 2 -   1652518 g--g
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17798284 2 -  60362399 a--g
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184341 2 -    185531 a--g
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9033727 2 -   9314153 a--g
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17957992 2 -  59632846 a--g
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18499504 2 +  63665305 a--g
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           154658 2 -    496798 G--G
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                3956 2 -     11696 g--g
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    136257 2 +    179628 a--c
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     92120 2 +    217609 g--g
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          7998 2 -     11392 g--g
i Cebuella_niveiventris.k141_1251222                     I 5 C 0
s Cebuella_pygmaea.k141_1309012                               4096 2 -      7577 g--g
i Cebuella_pygmaea.k141_1309012                          I 5 C 0
s Cephalopachus_bancanus.k141_1423433                         4168 2 +     31688 g--g
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12230545 2 +  27778364 g--g
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1572 2 -     25243 g--g
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4473643 2 +   4669795 G--G
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        12192 2 -     19203 g--g
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           6614 2 +      8260 g--g
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           6840 2 +     27781 g--g
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         6999 2 -     20310 g--g
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           9978 2 +     29689 g--g
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            4409 2 +      9989 g--g
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          12657 2 -     27936 g--g
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            1523 2 -     17152 g--g
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38815061 2 +  39242232 g--g
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21220752 2 -  21565898 g--g
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       37870 2 -     53127 g--g
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        5141 2 +      7159 g--g
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       12673 2 -     27947 g--g
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         12646 2 +     17596 g--g
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          1880 2 +     26000 g--g
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             19784 2 -     52598 g--g
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           15135 2 +     57038 g--g
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           9104 4 +     11226 GCAG
i Chiropotes_albinasus.k141_2813271                      C 0 I 226
s Chlorocebus_aethiops.ctg25                              18426630 2 -  18827391 g--a
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       13067 2 -     50209 g--a
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135420067 2 + 135778131 G--A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 16971 2 +     19366 g--a
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            172071 2 +    839153 g--a
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1908581 2 +   2368649 G--G
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199948260 2 + 200372422 g--g
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              35119 2 +     84244 g--g
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          13420 2 -     20389 g--a
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 48153 2 +     63868 A--A
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11665478 2 + 224834208 a--a
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               1709 1 -     19598 ---A
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27581 2 -     87169 a--g
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    835815 2 +   1526836 G--A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12536000 2 -  12879189 g--g
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8628972 2 +  20541912 g--g
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672395 2 +   1390856 g--g
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    5148 2 +    198055 g--g
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE759718.1                                   9625 2 +     11740 a--a
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          17657 2 -    110024 A--A
i Ellobius_lutescens.LOEQ01008920.1                      I 7 C 0
s Ellobius_talpinus.LOJH01109367.1                            3711 2 -      6299 A--A
i Ellobius_talpinus.LOJH01109367.1                       I 7 C 0
s Enhydra_lutris.KZ291758.1                               16328417 2 -  41312741 a--g
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144536 2 -  14770903 g--g
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1282457 2 +   4378816 g--g
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18530278 2 -  39960074 g--g
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               32293 2 +    498745 g--g
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21203238 2 -  21539334 g--a
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              12480 2 -     14127 g--g
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                5178 2 -     16928 g--g
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              14207 2 -     25546 g--g
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            11405 2 +     26330 g--g
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 12645 2 +     23973 g--g
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                11405 2 +     75513 g--g
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  9347 1 +     97555 g---
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            12262 2 +     26496 g--g
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  2880 2 -     17153 g--g
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              12456 2 +    111500 g--g
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Galago_moholi.ctg2040                                     424799 2 -    453645 g--g
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             2506 2 +     11339 g--g
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1959596                            6314 2 +      6795 g--g
i Galagoides_demidoff.k141_1959596                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_197845               2719 2 -      3123 g--g
i Galeopterus_variegatus.GalVar_scaffold_197845          C 0 C 0
s Gorilla_beringei.k141_3596273                              14028 2 -     32273 c--g
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186336176 2 + 186649187 c--g
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           5535 2 -     19426 g--g
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             10684 2 -     15286 g--g
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             12323 2 +     18253 g--g
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         12424 2 -     41752 g--g
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         12262 2 -     16460 g--g
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               241418 2 +    327341 a--g
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_403422                 725 2 -       893 A--G
i Heterohyrax_brucei.HetBruBak_scaffold_403422           C 0 N 0
s Hipposideros_armiger.JXIK01000431.1                       110892 2 +   1711038 g--a
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               42321 2 +     43066 a--a
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    432842 2 +    630532 c--g
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  43557 2 +     55795 a--a
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_232023                                 608 2 -     12752 t--g
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                                652 2 +     14092 t--g
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189541435 2 - 191637585 t--g
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3334329 2 -  11177569 t--g
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7518588 2 -   7955117 a--a
i Ictidomys_tridecemlineatus.JH393364.1                  I 2 C 0
s Indri_indri.k141_3655594                                   21227 2 +     31101 g--g
i Indri_indri.k141_3655594                               C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    12961 2 -     42476 g--g
i Lasiurus_borealis.LasBor_scaffold_32767                I 9 I 8
s Lemur_catta.scaffold_24                                 15522767 2 -  30322482 g--g
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        5698 2 +     64341 g--g
i Leontocebus_fuscicollis.k141_1820339                   I 41 C 0
s Leontocebus_illigeri.k141_3350179                           3025 2 +      4941 G--G
i Leontocebus_illigeri.k141_3350179                      I 114 C 0
s Leontocebus_nigricollis.k141_4610752                        5741 2 +     35603 G--G
i Leontocebus_nigricollis.k141_4610752                   I 114 C 0
s Leontopithecus_chrysomelas.k141_1519602                    27168 2 +     38576 g--g
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         23865 2 +     66356 G--G
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          9675 2 -     23766 g--g
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             27741 2 +     45836 g--g
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                           266 2 +     25010 g--g
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      25677 2 +     54090 g--g
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3041954 2 +   3914936 a--g
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     4627 2 -     14121 g--g
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1435190 2 +   1826925 g--g
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                            4216074 2 -  43346337 a--g
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17954232 2 -  59628241 a--g
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               5005 2 +     40492 g--g
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59674267 2 +  60120075 g--g
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 10761 2 -     26193 g--g
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            78565 2 -    114318 g--g
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  4264 2 -     23192 g--g
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                13725 2 -     29190 g--g
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  22291 2 +     37952 g--g
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186837380 2 + 187317192 G--G
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25455942 2 -  25927173 G--G
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  78141 2 +     89720 g--g
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 5138 2 +     20474 g--g
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   4939 2 -     14993 g--g
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  327810 2 -    668171 g--g
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 3250 2 -     24072 g--g
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               23879 2 -     45290 g--g
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 89717 2 +     94391 g--a
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23935463 2 -  24302211 g--g
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               349595 2 +    752769 g--g
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33100892 2 -  40650429 g--a
i Marmota_marmota.CZRN01000018.1                         I 2 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         9437 2 -    207569 g--a
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 4268
s Mellivora_capensis.MelCap_flattened_line_69365              9134 2 +     13704 a--g
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 30771 2 +    140813 A--A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12180542 2 -  29670104 a--a
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                3913 2 -      7380 g--g
i Mico_argentatus.k141_1239457                           I 5 C 0
s Mico_humeralifer.k141_1976199                               2986 2 +     18990 g--g
i Mico_humeralifer.k141_1976199                          I 5 C 0
s Mico_schneideri.k141_1950671                                      3925 2 -      7356 g--g
i Mico_schneideri.k141_1950671                                 I 5 C 0
s Microcebus_murinus.CM007674.1                           18290179 2 -  93316391 G--G
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                14502 2 -     19307 g--g
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11258708 2 -  27267610 A--A
i Microtus_ochrogaster.CM001695.1                        I 7 C 0
s Miopithecus_ogouensis.k141_534055                           7187 2 -     28506 g--g
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         4822 2 -      8324 a--g
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      7736 2 -     37649 g--g
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140420 2 -    366855 g--a
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   34530 2 +     37127 a--g
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5609 2 +     14753 g--t
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84359184 2 - 120012414 a--a
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87648168 2 - 129401213 a--a
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31352830 2 -  89631738 A--A
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90750246 2 - 130317789 a--a
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               300311 2 -  14710649 a--g
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187899 2 +    196477 a--g
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nasalis_larvatus.k141_413338                               13182 2 +     21681 g--g
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306080 2 +  31847680 a--g
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9148490 2 -   9404916 a--g
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Ochotona_princeps.JH802162.1                             1361707 2 +   3988456 g--t
i Ochotona_princeps.JH802162.1                           I 1 C 0
s Odobenus_rosmarus.KB229312.1                              505760 2 -   2017862 a--g
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   22291 2 +     28053 A--A
i Ondatra_zibethicus.OndZib_scaffold_46174               I 24 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    77394 2 +    102263 A--A
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67145473 2 + 174332312 g--g
i Oryctolagus_cuniculus.CM000791.1                       I 1 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       461454 2 -    559221 a--g
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         2340 2 +      8798 g--g
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             694505 2 -   1103335 G--G
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    42124 2 +     80009 C--G
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189141036 2 + 189151597 C--G
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  150283 2 +    230217 a--t
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                263488 2 +  18783137 a--t
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4720126 2 -   8748460 a--t
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183441217 2 + 183742232 G--G
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             4911 2 +     20448 g--g
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20561719 2 +  20919399 g--g
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   3655 2 +     41871 g--g
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     6940 2 +     27711 g--g
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  7020 2 +      9205 g--g
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11746 2 -     78924 a--g
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            8485 2 +     13100 g--g
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             6887 2 +     25941 g--g
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18191997 2 -  18517816 A--A
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Piliocolobus_badius.k141_1234363                           41679 2 +     62158 g--g
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        36410 2 +     89929 g--g
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            37826 2 +     51399 g--g
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14294064 2 -  14605196 G--G
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              912 2 +     22620 g--g
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189129158 2 + 189387572 C--G
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9568766 2 +   9816681 c--g
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               71350 2 -     81375 g--g
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              3170 2 +     19060 g--g
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 11725 2 -     22811 a--g
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 I 184
s Prolemur_simus.MPIZ01000396.1                            2595445 2 -   4620579 G--G
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     989429 2 +   2598838 G--G
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          27739 2 +     38485 g--g
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             3899 2 +      4256 g--g
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          25252 2 +     35766 g--g
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           3434 2 -     24134 g--g
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        27256 2 -     67325 g--g
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           3492 2 -      6182 g--g
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             8413 2 -     21651 a--a
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            13798 2 -     21811 a--g
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39333 2 +     42204 a--g
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22975881 2 +  28871421 g--a
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1358967 2 +   4952924 g--a
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20273402 2 -  38429054 a--t
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             13181 2 -     91421 g--g
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7607307 2 +   7812017 g--g
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             13155 2 -     72585 g--g
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53568251 2 +  90668790 A--A
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             4862 2 -     11128 g--g
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91234218 2 - 195417433 G--G
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7669867 2 +   7961872 g--g
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                86899 2 -     96226 g--a
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               6012 4 -      8359 gCAG
i Saguinus_bicolor.k141_2619299                          T 383 I 381
s Saguinus_imperator.k141_2524406                              336 2 +      2197 g--G
i Saguinus_imperator.k141_2524406                        N 0 C 0
s Saguinus_inustus.k141_699149                               11758 2 +     13640 G--G
i Saguinus_inustus.k141_699149                           I 76 C 0
s Saguinus_labiatus.k141_285685                               6620 2 +      8564 G--G
i Saguinus_labiatus.k141_285685                          I 104 C 0
s Saguinus_midas.LG03                                    209466826 4 + 209938924 gcag
i Saguinus_midas.LG03                                    T 378 I 642
s Saguinus_mystax.k141_374627                                 6184 2 -      9399 g--g
i Saguinus_mystax.k141_374627                            I 152 C 0
s Saimiri_boliviensis.NW_024100920.1                     119949395 2 - 121099817 G--G
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       21851 2 +     46362 g--g
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               21946 2 +     45824 g--g
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             38574 2 -     64574 g--g
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               1580 2 -     23631 g--g
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 21839 2 -     61129 g--g
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          17687 2 -     19888 g--g
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      24890 2 +     39453 g--g
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            5409 2 +     27826 g--g
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             4929 2 -     19483 g--g
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      4998 2 +      7198 g--g
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         13251 2 +     15514 g--g
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               2866 2 +   1910179 g--t
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13649746 1 -  18376816 ---A
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1951781 2 -   3870691 g--a
i Spermophilus_dauricus.KZ294078.1                       I 2 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             29835 2 +     97271 a--g
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              17419 2 -    196729 a--g
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6809617 2 +  69701581 A--G
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1091477 2 -   1523678 t--g
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 9716 2 +     41958 g--g
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 71255 2 +    116680 g--g
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      117868 2 -    156842 g--g
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    386321 2 +    539355 g--g
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               24780 2 +     70052 g--g
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_2029956                               4120 2 +      4644 g--g
i Tarsius_wallacei.k141_2029956                          C 0 C 0
s Theropithecus_gelada.CM009954.1                        186426583 2 + 186847797 G--G
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     80043 2 +    610378 g--g
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          8981 2 -     20410 g--g
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    13178 2 +     15221 g--g
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        9082 2 +     19930 g--g
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       5510 2 -     19997 g--g
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            45640 2 -     60166 g--g
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        13104 2 -     27529 g--g
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     13048 2 -     18194 g--g
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           6777 2 -     21137 g--g
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    5480 2 -     10723 g--g
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         4636 2 +      9834 g--g
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        22949 2 +     32220 g--g
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5937051 2 +   6242583 g--g
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        6305 2 +     20839 g--g
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2154340 2 +   4065304 g--g
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     7988 2 -     10553 g--g
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4849530 2 -   5085361 a--g
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  10100 2 +     50397 g--g
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             10155 2 +     24756 g--g
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5370982 2 -   5488506 g--g
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  9900 2 -     43706 a--g
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        22729 2 -     24430 G--A
i Xerus_inauris.XerIna_scaffold_48378                    I 2 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          4268 2 +     86975 a--g
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Echinops_telfairi.JH980293.1                            48779651 164 + 111700974 I
e Sapajus_macrocephalus.k141_351809                          54316 0 -     80660 C
e Sapajus_apella.ctg103                                    5419275 0 -   5703754 C
e Cebus_unicolor.k141_219506                                 14903 0 -     16904 I
e Cebus_olivaceus.k141_1000828                                1853 231 -      2944 I
e Cebus_albifrons.Contig27                                25650611 0 +  26074798 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Loris_tardigradus.ctg83                                  1003049 50 +   6120653 I
e Loris_lydekkerianus.k141_2539221                            4210 50 +     11245 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52652 8 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   3750 9 +      8208 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937 0 +    114563 C
e Sigmodon_hispidus.SigHis_scaffold_60841                    11304 0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152480 8 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813 0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Orycteropus_afer.OryAfe_flattened_line_144387               9003 16 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105748664 47 + 199412804 I
e Nycticebus_coucang.k141_771082                                88 47 -      2667 I
e Nycticebus_bengalensis.LG01                            102578243 47 - 196305487 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Nannospalax_galili.AXCS01343547.1                            805 0 +       996 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33102 0 +     33610 C
e Myotis_lucifugus.GL429869.1                              3902542 5 -   4330536 I
e Myotis_davidii.KB100139.1                                1586477 0 -   6019432 C
e Myotis_brandtii.KE162005.1                                278778 5 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33438 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849761 0 +   8254450 C
e Microgale_talazaci.MicTal_scaffold_6613                    20898 16 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50341 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352 0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547 0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  8618 0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20195104 0 + 205367284 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Elephantulus_edwardii.JH947257.1                         1089466 1162 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084 0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            62283 174 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Condylura_cristata.JH655891.1                           17547413 8 -  53390261 I
e Chinchilla_lanigera.JH722012.1                           1251498 0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_713168             195 9 -      2554 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99291 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157 0 -  23392119 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       4778  8 +     62944 AC----------------CGCC-TG
s Acinonyx_jubatus.LLWD01001279.1                           826406  8 -   1699592 ac----------------ggat-tg
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     68468  4 +     87051 --------------------AA-TA
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 710
s Ailuropoda_melanoleuca.LNAT01000098.1                    9509670  8 -  29979442 ac----------------tgac-tg
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             78451  8 -    347723 at----------------tgac-tg
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     72729  5 -     89534 --------------------AGCTA
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 640
s Allenopithecus_nigroviridis.k141_3361533                   12691  8 -     52922 at----------------cacc-tg
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         12634  8 -     28001 at----------------cacc-tg
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          3080  8 -     18505 at----------------cacc-tg
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           3929  8 -     12518 at----------------cacc-tg
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                              1493  7 -     27731 ac----------------cccc--g
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                1618  7 +      3134 ac----------------cccc--g
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               1753  7 -     45847 ac----------------cccc--g
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                22959  7 +     25266 ac----------------cccc--g
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           2143  7 +      2906 ac----------------cccc--g
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            16256  7 -     18578 ac----------------cccc--g
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              1643  7 +     47717 ac----------------cccc--g
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             1773  7 -      3544 ac----------------cccc--g
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             12993  7 +     50774 ac----------------cccc--g
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184183  8 +    412891 ac----------------tgac-tg
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  13616  8 -     33861 ac----------------ccct-tg
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            13636  8 -     34016 ac----------------ccct-tg
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4296033  8 -   5030052 AC----------------CCCC-TG
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             13638  8 -     34685 ac----------------cccc-tg
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               26759  8 -     47192 ac----------------gccc-tg
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      10578  4 +     20879 --------------------at-tg
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                        9850  8 +     14667 ac----------------tgac-tg
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3596  8 +     43469 ac----------------tgac-tg
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  52377  8 -     92717 ac----------------tgac-tg
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              53006  8 +     85213 ac----------------tgac-tg
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             3376  8 -     10423 ac----------------cccc-tg
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             22877  8 +     31915 ac----------------cccc-ag
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            3346  8 +      5267 ac----------------cccc-tg
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23588560  8 - 189096842 AC----------------CCCC-TG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             10090  8 -     12001 ac----------------cccc-tg
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10001498  8 -  17673402 tc----------------tgac-tg
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2333956  8 -   7040546 tc----------------tgac-tg
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  402239  8 -   1652518 tc----------------tgac-tg
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17798286  8 -  60362399 at----------------tgac-tg
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184343  8 -    185531 at----------------tgac-tg
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9033729  8 -   9314153 at----------------tgac-tg
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17957994  8 -  59632846 at----------------tgac-tg
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18499506  8 +  63665305 at----------------tgac-tg
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           154660  8 -    496798 AT----------------TGAT-GG
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                3958  8 -     11696 at----------------cgac-tg
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    136259  4 +    179628 --------------------aa-ta
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     92122  8 +    217609 tc----------------tgac-tt
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          8000  8 -     11392 ac----------------cccc-tg
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               4098  8 -      7577 ac----------------cccc-tg
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         4170  8 +     31688 at----------------tgat-gg
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12230547  8 +  27778364 at----------------tgaa-tg
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1574  8 -     25243 at----------------tgaa-tg
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4473645  8 +   4669795 AT----------------CGCC-TG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        12194  8 -     19203 at----------------cgcc-tg
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           6616  8 +      8260 at----------------cgcc-tg
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           6842  8 +     27781 at----------------cgcc-tg
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         7001  8 -     20310 at----------------cacc-tg
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           9980  8 +     29689 at----------------cgcc-tg
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            4411  8 +      9989 at----------------cacc-tg
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          12659  8 -     27936 at----------------cacc-tg
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            1525  8 -     17152 at----------------cacc-tg
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38815063  8 +  39242232 at----------------cacc-tg
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21220754  8 -  21565898 at----------------cacc-tg
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       37872  8 -     53127 at----------------cacc-tg
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        5143  8 +      7159 at----------------cacc-tg
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       12675  8 -     27947 at----------------cacc-tg
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         12648  8 +     17596 at----------------cacc-tg
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          1882  8 +     26000 at----------------cacc-tg
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             19786  8 -     52598 ac----------------tgac-tg
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           15137  8 +     57038 ac----------------tgac-tg
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           9334  8 +     11226 AC----------------CCCC-TG
i Chiropotes_albinasus.k141_2813271                      I 226 C 0
s Chlorocebus_aethiops.ctg25                              18426632  8 -  18827391 at----------------cacc-tg
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       13069  8 -     50209 at----------------cacc-tg
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135420069  8 + 135778131 AT----------------CACC-TG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 16973  8 +     19366 ag----------------tgac-tg
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            172073  8 +    839153 ag----------------tgac-tg
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1908583  8 +   2368649 AT----------------CGCC-TG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199948262  8 + 200372422 at----------------cgcc-tg
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              35121  8 +     84244 at----------------cgcc-tg
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          13422  8 -     20389 at----------------tgac-tg
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 48155  4 +     63868 --------------------AA-TA
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 647
s Cricetulus_griseus.LT883664.1                           11665480  2 + 224834208 --------------------aa---
i Cricetulus_griseus.LT883664.1                          C 0 I 763
s Crocidura_indochinensis.CroInd_scaffold_37019               1710  8 -     19598 GC----------------TGAC-TG
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27583  8 -     87169 ac----------------tgat-tg
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    835817  4 +   1526836 --------------------AA-TG
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12536002  8 -  12879189 at----------------tgac-tg
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8628974  8 +  20541912 gc----------------tgac-tg
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672397  8 +   1390856 at----------------tgaa-tg
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    5150  8 +    198055 at----------------tgaa-tg
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE759718.1                                   9627  8 +     11740 ac----------------tgac-tg
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          17659  4 -    110024 --------------------AA-TA
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 1359
s Ellobius_talpinus.LOJH01109367.1                            3713  4 -      6299 --------------------AA-TA
i Ellobius_talpinus.LOJH01109367.1                       C 0 I 1386
s Enhydra_lutris.KZ291758.1                               16328419  8 -  41312741 ac----------------tgaa-tg
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144538  8 -  14770903 at----------------tgac-tg
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1282459  8 +   4378816 ac----------------tgca-cg
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18530280  8 -  39960074 ac----------------tgca-ca
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               32295  8 +    498745 ac----------------tgca-ca
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21203240  8 -  21539334 at----------------cacc-tg
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              12482  8 -     14127 ac----------------tgac-tg
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                5180  8 -     16928 ac----------------tgac-tg
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              14209  8 -     25546 ac----------------tgac-tg
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            11407  8 +     26330 ac----------------tgac-tg
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 12647  8 +     23973 ac----------------tgac-tg
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                11407  8 +     75513 ac----------------tgac-tg
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  9348  5 +     97555 -------------------gac-tg
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            12264  8 +     26496 ac----------------tgac-tg
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  2882  8 -     17153 ac----------------tgac-tg
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              12458  8 +    111500 ac----------------tgac-tg
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Galago_moholi.ctg2040                                     424801  8 -    453645 ac----------------tgac-tg
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             2508  8 +     11339 ac----------------tgac-tg
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1959596                            6316  8 +      6795 ac----------------tgac-tg
i Galagoides_demidoff.k141_1959596                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_197845               2721  8 -      3123 ac----------------ggac-tt
i Galeopterus_variegatus.GalVar_scaffold_197845          C 0 C 0
s Gorilla_beringei.k141_3596273                              14030  8 -     32273 ac----------------cgcc-tg
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186336178  8 + 186649187 ac----------------cgcc-tg
i Gorilla_gorilla.LT578341.1                             C 0 I 259
s Hapalemur_alaotrensis.k141_170648                           5537  8 -     19426 ac----------------cgac-tg
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             10686  8 -     15286 ac----------------cgac-tg
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             12325  8 +     18253 ac----------------cgac-tg
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         12426  8 -     41752 ac----------------tgac-tg
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         12264  8 -     16460 ac----------------cgac-tg
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               241420  8 +    327341 ac----------------tgat-ag
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_384612                 217  8 -       958 AG----------------TGAC-CA
i Heterohyrax_brucei.HetBruBak_scaffold_384612           N 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       110894  8 +   1711038 ac----------------tgac-tg
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               42323  8 +     43066 ac----------------tgac-tg
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    432844  8 +    630532 ac----------------cacc-tg
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  43559  8 +     55795 ac----------------taat-tt
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_232023                                 610  8 -     12752 ac----------------cacc-tg
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                                654  8 +     14092 ac----------------cacc-tg
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189541437  8 - 191637585 ac----------------cacc-tg
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3334331  8 -  11177569 ac----------------cacc-tg
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7518590  4 -   7955117 --------------------at-tg
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   21229  8 +     31101 ac----------------tgac-tg
i Indri_indri.k141_3655594                               C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_50988                    12412  8 +     29960 at----------------tgat-tg
i Lasiurus_borealis.LasBor_scaffold_50988                I 2 I 5
s Lemur_catta.scaffold_24                                 15522769  8 -  30322482 ac----------------cgac-tg
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        5700  8 +     64341 at----------------cccc-tg
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           3027  8 +      4941 AC----------------CCCC-TG
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        5743  8 +     35603 AC----------------CCCC-TG
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    27170  8 +     38576 ac----------------cccc-tg
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         23867  8 +     66356 AC----------------CCCC-TG
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          9677  8 -     23766 ac----------------tgac-tg
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             27743  8 +     45836 ac----------------tgac-tg
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                           268  8 +     25010 ag----------------tgac-tg
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      25679  8 +     54090 ac----------------tgac-tg
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3041956  8 +   3914936 at----------------tgac-tg
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     4629  8 -     14121 ac----------------tgag-gg
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1435192  8 +   1826925 at----------------cgcc-tg
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                            4216076  8 -  43346337 ac----------------tggc-tg
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17954234  8 -  59628241 at----------------tgac-tg
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               5007  8 +     40492 at----------------cgcc-tg
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59674269  8 +  60120075 at----------------cgcc-tg
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 10763  8 -     26193 at----------------cgcc-tg
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            78567  8 -    114318 at----------------cgcc-tg
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  4266  8 -     23192 at----------------cgcc-tg
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                13727  8 -     29190 at----------------cgcc-tg
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  22293  8 +     37952 at----------------cgcc-tg
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186837382  8 + 187317192 AT----------------CGCC-TG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25455944  8 -  25927173 AT----------------CTCC-TG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  78143  8 +     89720 ac----------------cgcc-tg
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 5140  8 +     20474 at----------------cgcc-tg
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   4941  8 -     14993 ac----------------cgcc-tg
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  327812  8 -    668171 at----------------cgcc-tg
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 3252  8 -     24072 at----------------cgcc-tg
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               23881  8 -     45290 at----------------cgcc-tg
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 89719  8 +     94391 ac----------------tgac-tg
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23935465  8 -  24302211 at----------------cgcc-tg
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               349597  8 +    752769 at----------------cgcc-tg
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33100894  4 -  40650429 --------------------at-tg
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        13707  8 -    207569 ac----------------tgat-gg
i Megaderma_lyra.MegLyr_scaffold_4542                    I 4268 T 4268
s Mellivora_capensis.MelCap_flattened_line_69365              9136  8 +     13704 at----------------tgaa-tg
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 30773  4 +    140813 --------------------AA-TA
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 672
s Mesocricetus_auratus.KB708134.1                         12180544  2 -  29670104 --------------------aa---
i Mesocricetus_auratus.KB708134.1                        C 0 I 391
s Mico_argentatus.k141_1239457                                3915  8 -      7380 ac----------------cccc-tg
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               2988  8 +     18990 ac----------------cccc-tg
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      3927  8 -      7356 ac----------------tccc-tg
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18290181  8 -  93316391 AC----------------TGAC-TG
i Microcebus_murinus.CM007674.1                          C 0 I 4
s Micronycteris_hirsuta.MicHir_scaffold_52381                14504  8 -     19307 ac----------------tgac-tg
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11258710  4 -  27267610 --------------------AA-TA
i Microtus_ochrogaster.CM001695.1                        C 0 I 1598
s Miopithecus_ogouensis.k141_534055                           7189  8 -     28506 at----------------cgcc-tg
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         4824  8 -      8324 at----------------tgac-tg
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      7738  8 -     37649 ac----------------tgac-tg
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140422  8 -    366855 ac----------------tgac-tg
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   34532  8 +     37127 ac----------------tgat-ag
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5611  8 +     14753 at----------------tgat-tg
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84359186  4 - 120012414 --------------------aa-ta
i Mus_caroli.LT608237.1                                  C 0 I 654
s Mus_musculus.chr8                                       87648170  4 - 129401213 --------------------aa-ta
i Mus_musculus.chr8                                      C 0 I 655
s Mus_pahari.LT608297.1                                   31352832  4 -  89631738 --------------------AT-TA
i Mus_pahari.LT608297.1                                  C 0 I 651
s Mus_spretus.CM004101.1                                  90750248  4 - 130317789 --------------------aa-ta
i Mus_spretus.CM004101.1                                 C 0 I 654
s Mustela_putorius.JH418006.1                               300313  8 -  14710649 at----------------tgaa-tg
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                278783  8 -  10118263 at----------------ttat-tg
i Myotis_brandtii.KE162005.1                             I 5 C 0
s Myotis_davidii.KB100139.1                                1586477  8 -   6019432 at----------------tgat-tg
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902547  8 -   4330536 at----------------ttac-tg
i Myotis_lucifugus.GL429869.1                            I 5 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        33102  8 +     33610 gt----------------tgat-tg
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187901  8 +    196477 ag----------------tgac-tg
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nasalis_larvatus.k141_413338                               13184  8 +     21681 at----------------cgcc-tg
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306082  8 +  31847680 at----------------tgac-tg
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9148492  4 -   9404916 at----------------tg-----
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Ochotona_princeps.JH802162.1                             1361709  8 +   3988456 gc----------------caag-ga
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              505762  8 -   2017862 at----------------tgac-tg
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   22293  4 +     28053 --------------------AA-TA
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 1559
s Onychomys_torridus.OnyTor_scaffold_2986                    77396  4 +    102263 --------------------AA-TA
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 1442
s Oryctolagus_cuniculus.CM000791.1                        67145475  8 + 174332312 ac----------------cgag-gg
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       461456  8 -    559221 ac----------------tgac-tg
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         2342  8 +      8798 ac----------------tgaa-tg
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             694507  8 -   1103335 AC----------------TGAA-TG
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    42126  8 +     80009 AC----------------CGCC-TG
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189141038  8 + 189151597 AC----------------CGCC-TG
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  150285  8 +    230217 ac----------------ggat-tg
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                263490  8 +  18783137 ac----------------ggat-tg
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4720128  8 -   8748460 ac----------------ggat-tg
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183441219  8 + 183742232 AT----------------CGCC-TG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             4913  8 +     20448 at----------------cgcc-tg
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20561721  8 +  20919399 at----------------cgcc-tg
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   3657  8 +     41871 at----------------cgcc-tg
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     6942  8 +     27711 at----------------cgcc-tg
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  7022  8 +      9205 at----------------cgcc-tg
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11748  8 -     78924 gc----------------tgac-tg
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            8487  8 +     13100 ac----------------tgac-tg
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             6889  8 +     25941 ac----------------ttac-tg
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18191999  4 -  18517816 --------------------AA-TA
i Peromyscus_maniculatus.KI615324.1                      C 0 I 1443
s Piliocolobus_badius.k141_1234363                           41681  8 +     62158 at----------------cgcc-tg
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        36412  8 +     89929 at----------------cgct-tg
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            37828  8 +     51399 at----------------cgct-tg
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14294066  8 -  14605196 AT----------------CGCC-TG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              914  8 +     22620 at----------------tgat-tg
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189129160  8 + 189387572 AC----------------TGCC-TG
i Pongo_abelii.CM009266.2                                C 0 I 24608
s Pongo_pygmaeus.ctg66                                     9568768  8 +   9816681 ac----------------tgcc-tg
i Pongo_pygmaeus.ctg66                                   C 0 I 5
s Presbytis_comata.k141_677006                               71352  8 -     81375 at----------------cgcc-tg
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              3172  8 +     19060 at----------------cgcc-tg
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 11911  8 -     22811 ag----------------tgac-ta
i Procavia_capensis.ProCapCap_scaffold_85530             I 184 C 0
s Prolemur_simus.MPIZ01000396.1                            2595447  8 -   4620579 AC----------------TGAC-TG
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     989431  8 +   2598838 AC----------------TGAC-TG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          27741  8 +     38485 ac----------------tgac-tg
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             3901  8 +      4256 ac----------------tgac-tg
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          25254  8 +     35766 ac----------------tgac-tg
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           3436  8 -     24134 ac----------------tgac-tg
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        27258  8 -     67325 ac----------------tgac-tg
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           3494  8 -      6182 ac----------------tgac-tg
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             8415  4 -     21651 --------------------aa-ta
i Psammomys_obesus.NESX01036370.1                        C 0 I 660
s Pteronotus_parnellii.KE909381.1                            13800  8 -     21811 at----------------tgac-tg
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39335  8 +     42204 at----------------tgaa-tg
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22975883  8 +  28871421 ac----------------tgac-tg
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1358969  8 +   4952924 ac----------------tgac-tg
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20273404  8 -  38429054 ac----------------ggaa-tg
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             13183  8 -     91421 at----------------cgcc-tg
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7607309  8 +   7812017 at----------------cgcc-tg
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             13157  8 -     72585 at----------------cgcc-tg
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53568253  4 +  90668790 --------------------AA-TA
i Rattus_norvegicus.chr16                                C 0 I 646
s Rhinopithecus_bieti.k119_217274                             4864  8 -     11128 at----------------cgct-tg
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91234220  8 - 195417433 AT----------------CGCC-TG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7669869  8 +   7961872 at----------------cgct-tg
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                86901  8 -     96226 ac----------------tgac-tg
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               6397  8 -      8359 AC----------------CCCC-TG
i Saguinus_bicolor.k141_2619299                          I 381 C 0
s Saguinus_imperator.k141_2524406                              338  8 +      2197 AC----------------CCCC-TG
i Saguinus_imperator.k141_2524406                        C 0 C 0
s Saguinus_inustus.k141_699149                               11760  8 +     13640 AC----------------CCCC-TG
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               6622  8 +      8564 AC----------------CCCC-TG
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209467472  8 + 209938924 AC----------------CCCC-TG
i Saguinus_midas.LG03                                    I 642 C 0
s Saguinus_mystax.k141_374627                                 6186  8 -      9399 ac----------------cccc-tg
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119949397  8 - 121099817 AC----------------CCCC-Tg
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       21853  8 +     46362 ac----------------cccc-tg
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               21948  8 +     45824 ac----------------cccc-tg
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             38576  8 -     64574 ac----------------cccc-tg
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               1582  8 -     23631 ac----------------cccc-tg
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 21841  8 -     61129 ac----------------cccc-tg
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          17689  8 -     19888 at----------------cgcc-tg
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      24892  8 +     39453 at----------------cgcc-tg
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            5411  8 +     27826 at----------------cgcc-tg
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             4931  8 -     19483 at----------------cgcc-tg
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      5000  8 +      7198 at----------------cgcc-tg
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         13253  8 +     15514 at----------------cgcc-tg
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               2868  8 +   1910179 ac----------------tgac-tg
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13649747 24 -  18376816 GTGGAATTGAGAAGGGTTTGAT-TG
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1951783  4 -   3870691 --------------------at-tg
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             29837  8 +     97271 at----------------tgac-ag
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              17421  8 -    196729 ac----------------tgat-ag
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6809619  8 +  69701581 TT----------------TGGC-TG
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1091479  8 -   1523678 ac----------------cacc-tg
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 9718  8 +     41958 at----------------tgaa-tg
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 71257  8 +    116680 ag----------------tgac-tg
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      117870  8 -    156842 at----------------tgaa-tg
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    386323  8 +    539355 at----------------tgaa-tg
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               24782  8 +     70052 at----------------tgat-gg
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_2029956                               4122  8 +      4644 at----------------tgat-gg
i Tarsius_wallacei.k141_2029956                          C 0 C 0
s Theropithecus_gelada.CM009954.1                        186426585  8 + 186847797 AT----------------CGCC-TG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     80045  8 +    610378 ac----------------tgac-tg
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          8983  8 -     20410 at----------------cgcc-tg
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    13180  8 +     15221 at----------------cgcc-tg
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        9084  8 +     19930 at----------------cgcc-tg
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       5512  8 -     19997 at----------------cccc-tg
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            45642  8 -     60166 at----------------cgcc-tg
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        13106  8 -     27529 at----------------cgcc-tg
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     13050  8 -     18194 at----------------cgcc-tg
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           6779  8 -     21137 at----------------cccc-tg
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    5482  8 -     10723 at----------------cccc-tg
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         4638  8 +      9834 at----------------cgcc-tg
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        22951  8 +     32220 at----------------cgcc-tg
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5937053  8 +   6242583 at----------------cgcc-tg
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        6307  8 +     20839 at----------------cgcc-tg
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2154342  8 +   4065304 tt----------------tgac-tg
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     7990  8 -     10553 tt----------------tgac-tg
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4849532  8 -   5085361 ac----------------tgac-tg
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  10102  8 +     50397 ac----------------tgac-tg
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             10157  8 +     24756 ac----------------tgac-tg
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5370984  8 -   5488506 tg----------------tgac-tg
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  9902  8 -     43706 at----------------tgac-tg
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        22731  4 -     24430 --------------------ac-tg
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          4270  8 +     86975 at----------------tgac-cg
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Echinops_telfairi.JH980293.1                            48779651 164 + 111700974 I
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Cebus_unicolor.k141_219506                                 14903  0 -     16904 I
e Cebus_olivaceus.k141_1000828                                1853 231 -      2944 I
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Loris_tardigradus.ctg83                                  1003049 50 +   6120653 I
e Loris_lydekkerianus.k141_2539221                            4210 50 +     11245 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52652  8 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   3750  9 +      8208 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Sigmodon_hispidus.SigHis_scaffold_60841                    11304  0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152480  8 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orycteropus_afer.OryAfe_flattened_line_144387               9003 16 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105748664 47 + 199412804 I
e Nycticebus_coucang.k141_771082                                88 47 -      2667 I
e Nycticebus_bengalensis.LG01                            102578243 47 - 196305487 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Nannospalax_galili.AXCS01343547.1                            805  0 +       996 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33438  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849761  0 +   8254450 C
e Microgale_talazaci.MicTal_scaffold_6613                    20898 16 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50341  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352  0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  8618  0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20195104  0 + 205367284 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Elephantulus_edwardii.JH947257.1                         1089466 1162 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            62283 174 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Condylura_cristata.JH655891.1                           17547413  8 -  53390261 I
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_713168             195  9 -      2554 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       4786 5 +     62944 C-CATG
s Acinonyx_jubatus.LLWD01001279.1                           826414 5 -   1699592 c-caag
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 17
s Ailuropoda_melanoleuca.LNAT01000098.1                    9509678 5 -  29979442 c-caag
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 16
s Ailurus_fulgens.LNAC01001112.1                             78459 5 -    347723 c-caag
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 16
s Allenopithecus_nigroviridis.k141_3361533                   12699 5 -     52922 c-catg
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         12642 5 -     28001 c-catg
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          3088 5 -     18505 c-catg
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           3937 5 -     12518 c-catg
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                              1500 5 -     27731 c-cacg
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                1625 5 +      3134 c-cacg
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               1760 5 -     45847 c-cacg
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                22966 5 +     25266 c-cacg
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           2150 5 +      2906 c-cacg
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            16263 5 -     18578 c-cacg
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              1650 5 +     47717 c-cacg
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             1780 5 -      3544 c-cacg
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             13000 5 +     50774 c-cacg
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184191 5 +    412891 c-caag
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  13624 5 -     33861 c-cacg
i Aotus_azarae.k141_3104676                              C 0 I 12
s Aotus_griseimembra.k141_2240599                            13644 5 -     34016 c-cacg
i Aotus_griseimembra.k141_2240599                        C 0 I 12
s Aotus_nancymaae.KZ198451.1                               4296041 5 -   5030052 C-CACG
i Aotus_nancymaae.KZ198451.1                             C 0 I 12
s Aotus_trivirgatus.k141_2152450                             13646 5 -     34685 c-cacg
i Aotus_trivirgatus.k141_2152450                         C 0 I 12
s Aotus_vociferans.k141_344750                               26767 5 -     47192 c-cacg
i Aotus_vociferans.k141_344750                           C 0 I 12
s Aplodontia_rufa.AprRuf_scaffold_68852                      10582 5 +     20879 c-caag
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                        9858 5 +     14667 c-tgag
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3604 5 +     43469 c-caag
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  52385 5 -     92717 c-caag
i Avahi_laniger.k141_765380                              C 0 I 31
s Avahi_peyrierasi.k141_1424874                              53014 5 +     85213 c-caag
i Avahi_peyrierasi.k141_1424874                          C 0 I 31
s Callibella_humilis.k141_1278103                             3384 5 -     10423 c-cacg
i Callibella_humilis.k141_1278103                        C 0 I 12
s Callimico_goeldii.k141_1091182                             22885 5 +     31915 c-cacg
i Callimico_goeldii.k141_1091182                         C 0 I 12
s Callithrix_geoffroyi.k119_512088                            3354 5 +      5267 c-cacg
i Callithrix_geoffroyi.k119_512088                       C 0 I 12
s Callithrix_jacchus.pat_scaffold_3                       23588568 5 - 189096842 C-CACG
i Callithrix_jacchus.pat_scaffold_3                      C 0 I 12
s Callithrix_kuhlii.k119_1164682                             10098 5 -     12001 c-cacg
i Callithrix_kuhlii.k119_1164682                         C 0 I 12
s Camelus_bactrianus.KN276810.1                           10001506 5 -  17673402 c-cagg
i Camelus_bactrianus.KN276810.1                          C 0 I 15
s Camelus_dromedarius.KN272107.1                           2333964 5 -   7040546 c-cagg
i Camelus_dromedarius.KN272107.1                         C 0 I 15
s Camelus_ferus.KB017975.1                                  402247 5 -   1652518 c-cagg
i Camelus_ferus.KB017975.1                               C 0 I 15
s CanFam4.chr16                                           17798294 5 -  60362399 c-caag
i CanFam4.chr16                                          C 0 I 16
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184351 5 -    185531 c-caag
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 I 16
s Canis_lupus_dingo.QKWQ01000480.1                         9033737 5 -   9314153 c-caag
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 16
s Canis_lupus_familiaris.chr16                            17958002 5 -  59632846 c-caag
i Canis_lupus_familiaris.chr16                           C 0 I 16
s Canis_lupus_orion.HG994398.1                            18499514 5 +  63665305 c-caag
i Canis_lupus_orion.HG994398.1                           C 0 I 16
s Carlito_syrichta.NW_007259797.1                           154668 5 -    496798 C-CATG
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                3966 5 -     11696 c-cgag
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    136263 5 +    179628 t-gcta
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 334
s Catagonus_wagneri.CatWag_scaffold_2839                     92130 5 +    217609 c-cagg
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          8008 5 -     11392 c-cacg
i Cebuella_niveiventris.k141_1251222                     C 0 I 12
s Cebuella_pygmaea.k141_1309012                               4106 5 -      7577 c-cacg
i Cebuella_pygmaea.k141_1309012                          C 0 I 12
s Cephalopachus_bancanus.k141_1423433                         4178 5 +     31688 c-catg
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12230555 5 +  27778364 c-caag
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1582 5 -     25243 c-caag
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4473653 5 +   4669795 C-CATG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        12202 5 -     19203 c-cacg
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           6624 5 +      8260 c-catg
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           6850 5 +     27781 c-catg
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         7009 5 -     20310 c-catg
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           9988 5 +     29689 c-catg
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            4419 5 +      9989 c-cata
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          12667 5 -     27936 c-catg
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            1533 5 -     17152 c-catg
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38815071 5 +  39242232 c-catg
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21220762 5 -  21565898 c-catg
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       37880 5 -     53127 c-catg
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        5151 5 +      7159 c-catg
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       12683 5 -     27947 c-catg
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         12656 5 +     17596 c-catg
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          1890 5 +     26000 c-catg
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             19794 5 -     52598 c-caaa
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           15145 5 +     57038 c-caag
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           9342 5 +     11226 C-CACG
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18426640 5 -  18827391 c-catg
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       13077 5 -     50209 c-catg
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135420077 5 + 135778131 C-catg
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 16981 5 +     19366 c-cgag
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 I 1
s Choloepus_hoffmanni.KN194906.1                            172081 5 +    839153 c-cgag
i Choloepus_hoffmanni.KN194906.1                         C 0 I 1
s Colobus_angolensis.KN981557.1                            1908591 5 +   2368649 C-catg
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199948270 5 + 200372422 c-catg
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              35129 5 +     84244 c-catg
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          13430 5 -     20389 c-caag
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               1718 5 -     19598 A-TAAG
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 I 10
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27591 5 -     87169 c-caag
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 17
s Ctenodactylus_gundi.CteGun_scaffold_65                    835821 5 +   1526836 T-AAAG
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 16
s Daubentonia_madagascariensis.ctg71                      12536010 5 -  12879189 c-caaa
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8628982 5 +  20541912 c-cgag
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672405 5 +   1390856 c-caag
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    5158 5 +    198055 c-caag
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE759718.1                                   9635 5 +     11740 t-cagt
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Enhydra_lutris.KZ291758.1                               16328427 5 -  41312741 c-caag
i Enhydra_lutris.KZ291758.1                              C 0 I 17
s Eptesicus_fuscus.JH977646.1                              2144546 5 -  14770903 a-caag
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1282467 5 +   4378816 c-caag
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18530288 5 -  39960074 c-caag
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               32303 5 +    498745 c-caag
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21203248 5 -  21539334 c-catg
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              12490 5 -     14127 c-caag
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                5188 5 -     16928 c-caag
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              14217 5 -     25546 c-caag
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            11415 5 +     26330 c-caag
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 12655 5 +     23973 c-caag
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                11415 5 +     75513 t-caag
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  9353 5 +     97555 c-caag
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            12272 5 +     26496 c-caag
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  2890 5 -     17153 c-caag
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              12466 5 +    111500 c-caag
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Galago_moholi.ctg2040                                     424809 5 -    453645 c-tgag
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             2516 5 +     11339 c-tgag
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1959596                            6324 5 +      6795 c-tgag
i Galagoides_demidoff.k141_1959596                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_197845               2729 5 -      3123 c-caag
i Galeopterus_variegatus.GalVar_scaffold_197845          C 0 I 327
s Gorilla_beringei.k141_3596273                              14038 5 -     32273 c-cttg
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.CYUI03001814.1                             30550 5 -     31004 c-catg
i Gorilla_gorilla.CYUI03001814.1                         I 104 C 0
s Hapalemur_alaotrensis.k141_170648                           5545 5 -     19426 c-caag
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             10694 5 -     15286 c-caag
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             12333 5 +     18253 c-caag
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         12434 5 -     41752 c-caag
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         12272 5 -     16460 c-caag
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               241428 5 +    327341 c-caag
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 17
s Heterohyrax_brucei.HetBruBak_scaffold_384612                 225 5 -       958 G-CAAG
i Heterohyrax_brucei.HetBruBak_scaffold_384612           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       110902 5 +   1711038 c-caac
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               42331 5 +     43066 c-caac
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    432852 5 +    630532 c-catg
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  43567 5 +     55795 c-caag
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 39
s Hylobates_agilis.k141_232023                                 618 5 -     12752 c-catg
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                                662 5 +     14092 c-catg
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189541445 5 - 191637585 c-catg
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3334339 5 -  11177569 c-catg
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7518594 5 -   7955117 c-tgag
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 16
s Indri_indri.k141_3655594                                   21237 5 +     31101 c-caag
i Indri_indri.k141_3655594                               C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    12971 5 -     42476 c-caag
i Lasiurus_borealis.LasBor_scaffold_32767                I 8 I 111
s Lemur_catta.scaffold_24                                 15522777 5 -  30322482 c-caaa
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        5708 5 +     64341 c-caca
i Leontocebus_fuscicollis.k141_1820339                   C 0 I 12
s Leontocebus_illigeri.k141_3350179                           3035 5 +      4941 C-CACG
i Leontocebus_illigeri.k141_3350179                      C 0 I 12
s Leontocebus_nigricollis.k141_4610752                        5751 5 +     35603 C-CACG
i Leontocebus_nigricollis.k141_4610752                   C 0 I 12
s Leontopithecus_chrysomelas.k141_1519602                    27178 5 +     38576 c-catg
i Leontopithecus_chrysomelas.k141_1519602                C 0 I 12
s Leontopithecus_rosalia.k141_464620                         23875 5 +     66356 C-CACG
i Leontopithecus_rosalia.k141_464620                     C 0 I 12
s Lepilemur_ankaranensis.k141_596936                          9685 5 -     23766 c-caag
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             27751 5 +     45836 c-caag
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                           276 5 +     25010 c-caag
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      25687 5 +     54090 c-caag
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3041964 5 +   3914936 c-caag
i Leptonychotes_weddellii.KB714746.1                     C 0 I 16
s Lepus_americanus.LepAme_scaffold_107385                     4637 5 -     14121 c-caag
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1435200 5 +   1826925 c-catg
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                            4216084 5 -  43346337 c-caag
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17954242 5 -  59628241 c-caag
i Lycaon_pictus.CM007581.1                               C 0 I 16
s Macaca_arctoides.k141_2326796                               5015 5 +     40492 c-catg
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59674277 5 +  60120075 c-catg
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 10771 5 -     26193 c-catg
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            78575 5 -    114318 c-catg
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  4274 5 -     23192 c-catg
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                13735 5 -     29190 c-catg
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  22301 5 +     37952 c-catg
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186837390 5 + 187317192 C-CATG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25455952 5 -  25927173 C-CATG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  78151 5 +     89720 c-catg
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 5148 5 +     20474 c-catg
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   4949 5 -     14993 c-catg
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  327820 5 -    668171 c-catg
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 3260 5 -     24072 c-catg
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               23889 5 -     45290 c-catg
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 89727 5 +     94391 c-caat
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23935473 5 -  24302211 c-cacg
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               349605 5 +    752769 c-cacg
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33100898 5 -  40650429 c-tgag
i Marmota_marmota.CZRN01000018.1                         C 0 I 16
s Megaderma_lyra.MegLyr_scaffold_4542                         9447 6 -    207569 cccgag
i Megaderma_lyra.MegLyr_scaffold_4542                    T 4268 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              9144 5 +     13704 c-caag
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 17
s Mico_argentatus.k141_1239457                                3923 5 -      7380 c-cacg
i Mico_argentatus.k141_1239457                           C 0 I 12
s Mico_humeralifer.k141_1976199                               2996 5 +     18990 c-catg
i Mico_humeralifer.k141_1976199                          C 0 I 12
s Mico_schneideri.k141_1950671                                      3935 5 -      7356 c-cacg
i Mico_schneideri.k141_1950671                                 C 0 I 12
s Microcebus_murinus.CM007674.1                           18290193 5 -  93316391 C-CTAG
i Microcebus_murinus.CM007674.1                          I 4 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                14512 5 -     19307 c-caag
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miopithecus_ogouensis.k141_534055                           7197 5 -     28506 c-catg
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         4832 5 -      8324 c-caag
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 16
s Mirza_zaza.k141_952172                                      7746 5 -     37649 c-ctag
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140430 5 -    366855 c-caag
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   34540 5 +     37127 c-caag
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 17
s Murina_feae.MurFea_scaffold_85699                           5619 5 +     14753 c-caag
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mustela_putorius.JH418006.1                               300321 5 -  14710649 c-caag
i Mustela_putorius.JH418006.1                            C 0 I 17
s Myotis_brandtii.KE162005.1                                278791 5 -  10118263 c-caag
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1586485 5 -   6019432 c-caag
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902555 5 -   4330536 c-caag
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        33110 5 +     33610 c-caag
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187909 5 +    196477 c-ctag
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 I 1
s Nasalis_larvatus.k141_413338                               13192 5 +     21681 c-catg
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306090 5 +  31847680 c-caag
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 15
s Nyctereutes_procyonoides.CAJHUB010000658.1               9148496 5 -   9404916 c-caag
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 16
s Ochotona_princeps.JH802162.1                             1361717 5 +   3988456 c-tacg
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              505770 5 -   2017862 c-caag
i Odobenus_rosmarus.KB229312.1                           C 0 I 16
s Oryctolagus_cuniculus.CM000791.1                        67145483 5 + 174332312 c-caag
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       461464 5 -    559221 c-caag
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 16
s Otolemur_crassicaudatus.k141_222918                         2350 5 +      8798 c-tgag
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             694515 5 -   1103335 C-TGAC
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    42134 5 +     80009 C-CATG
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189141046 5 + 189151597 C-CATG
i Pan_troglodytes.CM009242.2                             C 0 I 62
s Panthera_onca.PanOnc_flattened_line_3271                  150293 5 +    230217 c-caag
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 17
s Panthera_pardus.KV860321.1                                263498 5 +  18783137 c-caag
i Panthera_pardus.KV860321.1                             C 0 I 17
s Panthera_tigris.KE722367.1                               4720136 5 -   8748460 c-caag
i Panthera_tigris.KE722367.1                             C 0 I 17
s Papio_anubis.CM001495.2                                183441227 5 + 183742232 C-CATG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             4921 5 +     20448 c-catg
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20561729 5 +  20919399 c-catg
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   3665 5 +     41871 c-catg
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     6950 5 +     27711 c-catg
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  7030 5 +      9205 c-catg
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11756 5 -     78924 c-caag
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 17
s Perodicticus_ibeanus.k141_855320                            8495 5 +     13100 c-tgag
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             6897 5 +     25941 c-tgag
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Piliocolobus_badius.k141_1234363                           41689 5 +     62158 c-catg
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        36420 5 +     89929 c-catg
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            37836 5 +     51399 c-catg
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14294074 5 -  14605196 C-CATG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              922 5 +     22620 t-caag
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189153776 5 + 189387572 N-NNNN
i Pongo_abelii.CM009266.2                                I 24608 T 24608
s Presbytis_comata.k141_677006                               71360 5 -     81375 c-cacg
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              3180 5 +     19060 c-cacg
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 11919 5 -     22811 g-caag
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2595455 5 -   4620579 C-CAAG
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     989439 5 +   2598838 C-CAAG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          27749 5 +     38485 c-caag
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_357118                             3909 5 +      4256 c-caag
i Propithecus_diadema.k141_357118                        C 0 C 0
s Propithecus_edwardsi.k141_1176054                          25262 5 +     35766 c-caag
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           3444 5 -     24134 c-caag
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        27266 5 -     67325 c-caag
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           3502 5 -      6182 c-caag
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            13808 5 -     21811 c-caag
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39343 5 +     42204 c-caag
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 17
s Pteropus_alecto.KB030862.1                              22975891 5 +  28871421 c-caat
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1358977 5 +   4952924 c-caat
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20273412 5 -  38429054 c-caag
i Puma_concolor.QAVW01001104.1                           C 0 I 17
s Pygathrix_cinerea.k141_1153803                             13191 5 -     91421 c-catg
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7607317 5 +   7812017 c-catg
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             13165 5 -     72585 c-catg
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             4872 5 -     11128 c-catg
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91234228 5 - 195417433 C-catg
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7669877 5 +   7961872 c-catg
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                86909 5 -     96226 c-caat
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               6405 5 -      8359 C-CACG
i Saguinus_bicolor.k141_2619299                          C 0 I 12
s Saguinus_imperator.k141_2524406                              346 5 +      2197 C-CACG
i Saguinus_imperator.k141_2524406                        C 0 I 12
s Saguinus_inustus.k141_699149                               11768 5 +     13640 C-CACG
i Saguinus_inustus.k141_699149                           C 0 I 12
s Saguinus_labiatus.k141_285685                               6630 5 +      8564 C-CACG
i Saguinus_labiatus.k141_285685                          C 0 I 12
s Saguinus_midas.LG03                                    209467480 5 + 209938924 C-CACG
i Saguinus_midas.LG03                                    C 0 I 12
s Saguinus_mystax.k141_374627                                 6194 5 -      9399 c-cacg
i Saguinus_mystax.k141_374627                            C 0 I 12
s Saimiri_boliviensis.NW_024100920.1                     119949405 5 - 121099817 c-catg
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       21861 5 +     46362 c-catg
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               21956 5 +     45824 c-catg
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             38584 5 -     64574 c-catg
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               1590 5 -     23631 c-catg
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 21849 5 -     61129 c-catg
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          17697 5 -     19888 c-catg
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      24900 5 +     39453 c-catg
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            5419 5 +     27826 c-catg
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             4939 5 -     19483 c-catg
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      5008 5 +      7198 c-catg
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         13261 5 +     15514 c-catg
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               2876 5 +   1910179 c-cgag
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13649771 5 -  18376816 A-CAGG
i Sorex_araneus.JH798187.1                               C 0 I 10
s Spermophilus_dauricus.KZ294078.1                         1951787 5 -   3870691 c-tgag
i Spermophilus_dauricus.KZ294078.1                       C 0 I 16
s Spilogale_gracilis.SpiGra_flattened_line_13525             29845 5 +     97271 c-caag
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 16
s Suricata_suricatta.SurSur_flattened_line_6629              17429 5 -    196729 c-caag
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 17
s Sus_scrofa.CM000828.4                                    6809627 4 +  69701581 C-CAg-
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1091487 5 -   1523678 c-catg
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 9726 5 +     41958 c-caag
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 20
s Tamandua_tetradactyla.TamTet_scaffold_1782                 71265 5 +    116680 c-cgag
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 I 1
s Tapirus_indicus.TapInd_scaffold_9301                      117878 5 -    156842 c-caag
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    386331 5 +    539355 c-caag
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               24790 5 +     70052 c-catg
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_2029956                               4130 5 +      4644 c-catg
i Tarsius_wallacei.k141_2029956                          C 0 C 0
s Theropithecus_gelada.CM009954.1                        186426593 5 + 186847797 C-CATG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     80053 5 +    610378 c-caag
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          8991 5 -     20410 c-catg
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    13188 5 +     15221 c-catg
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        9092 5 +     19930 c-catg
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       5520 5 -     19997 c-catg
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            45650 5 -     60166 c-cctg
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        13114 5 -     27529 c-catg
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     13058 5 -     18194 c-catg
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           6787 5 -     21137 c-catg
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    5490 5 -     10723 c-catg
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         4646 5 +      9834 c-catg
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        22959 5 +     32220 c-catg
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5937061 5 +   6242583 c-catg
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        6315 5 +     20839 c-cctg
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2154350 5 +   4065304 c-caag
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     7998 5 -     10553 c-caag
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4849540 5 -   5085361 c-caag
i Ursus_maritimus.KK499267.1                             C 0 I 16
s Varecia_rubra.k141_590885                                  10110 5 +     50397 c-caag
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             10165 5 +     24756 c-caag
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5370992 5 -   5488506 c-cagg
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                  9910 5 -     43706 c-caag
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 16
s Xerus_inauris.XerIna_scaffold_48378                        22735 5 -     24430 c-tgag
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          4278 5 +     86975 c-caag
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 16
e Echinops_telfairi.JH980293.1                            48779651 164 + 111700974 I
e Sapajus_macrocephalus.k141_351809                          54316 0 -     80660 C
e Sapajus_apella.ctg103                                    5419275 0 -   5703754 C
e Cebus_unicolor.k141_219506                                 14903 0 -     16904 I
e Cebus_olivaceus.k141_1000828                                1853 231 -      2944 I
e Cebus_albifrons.Contig27                                25650611 0 +  26074798 C
e Mus_pahari.LT608297.1                                   31352836 651 -  89631738 I
e Mus_spretus.CM004101.1                                  90750252 654 - 130317789 I
e Mus_musculus.chr8                                       87648174 655 - 129401213 I
e Mus_caroli.LT608237.1                                   84359190 654 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Loris_tardigradus.ctg83                                  1003049 50 +   6120653 I
e Loris_lydekkerianus.k141_2539221                            4210 50 +     11245 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      12869 338 +     63895 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52652 8 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   3750 9 +      8208 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937 0 +    114563 C
e Sigmodon_hispidus.SigHis_scaffold_60841                    11304 0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152480 8 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rattus_norvegicus.chr16                                 53568257 646 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Psammomys_obesus.NESX01036370.1                             8419 660 -     21651 I
e Pongo_pygmaeus.ctg66                                     9568776 5 +   9816681 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813 0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18192003 1443 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Orycteropus_afer.OryAfe_flattened_line_144387               9003 16 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    77400 1442 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   22297 1559 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105748664 47 + 199412804 I
e Nycticebus_coucang.k141_771082                                88 47 -      2667 I
e Nycticebus_bengalensis.LG01                            102578243 47 - 196305487 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Nannospalax_galili.AXCS01343547.1                            805 0 +       996 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33438 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849761 0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    20898 16 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12180546 391 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 30777 672 +    140813 I
e Manis_pentadactyla.KN006162.1                              50341 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352 0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547 0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  8618 0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20195104 0 + 205367284 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Ellobius_talpinus.LOJH01109367.1                            3717 1386 -      6299 I
e Ellobius_lutescens.LOEQ01008920.1                          17663 1359 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089466 1162 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084 0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            62283 174 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Cricetulus_griseus.LT883664.1                           11665482 763 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 48159 647 +     63868 I
e Condylura_cristata.JH655891.1                           17547413 8 -  53390261 I
e Chinchilla_lanigera.JH722012.1                           1251498 0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_713168             195 9 -      2554 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99291 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157 0 -  23392119 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     72734 640 -     89534 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     68472 710 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       4791  63 +     62944 A--GG--CA----GG-G-----------A---------A-AA------T-T--G-G--G-GA---T---------------G--ACG-----------------------GACA-----CATT---CTG---CATC------------ATGACTG-------C---G------------GCG---------------------------ATCGTGAAG-T---AC
s Acinonyx_jubatus.LLWD01001279.1                           826436  50 -   1699592 -----------------------------------------------------t-gg-g-gg---t---------------g--atg-----------------------gaaa-----tgtt---ctt---tatc------------ttgatta-------t---g------------gtg---------------------------gtggttaag-a---at
i Acinonyx_jubatus.LLWD01001279.1                        I 17 I 55
s Acomys_cahirinus.AcoCah_scaffold_12655                     69182  28 +     87051 a--ag--aa----gg-gAGATCTCAT--C---------A-AT-----TTAG-AA-G-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 710 I 509
s Ailuropoda_melanoleuca.LNAT01000098.1                    9509699  50 -  29979442 -----------------------------------------------------t-gg-g-ga---t---------------g--atg-----------------------gaaa-----tgtt---tgg---tatc------------ttgatta-------t---g------------tca---------------------------gtggttaag-t---ac
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 16 I 55
s Ailurus_fulgens.LNAC01001112.1                             78480  50 -    347723 -----------------------------------------------------t-gg-g-gg---t---------------a--atg-----------------------aaaa-----tgtt---cag---tatc------------ttgatta-------t---g------------gca---------------------------gtggttaag-t---ac
i Ailurus_fulgens.LNAC01001112.1                         I 16 I 55
s Allactaga_bullata.AllBul_scaffold_9566                     73374  31 -     89534 T--GG--ATATCCAG-GAG-GC-CAGGGA---------A-AT-----TT-G-GA-G-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Allactaga_bullata.AllBul_scaffold_9566                 I 640 I 86
s Allenopithecus_nigroviridis.k141_3361533                   12704  63 -     52922 a--gg--ca----ga-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--acg-----------------------ggca-----catt---ctg---catc------------atgattg-------c---g------------gcg---------------------------atcgtGAAG-T---AC
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         12647  63 -     28001 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--acg-----------------------ggca-----catt---ctg---catc------------atgattg-------c---g------------gcg---------------------------atcgtGAAG-T---AC
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          3093  63 -     18505 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--acg-----------------------ggca-----catt---ctg---catc------------atgattg-------c---g------------gcg---------------------------atcgtGAAG-T---AC
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           3942  63 -     12518 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--acg-----------------------ggca-----catt---ctg---catc------------atgattg-------c---g------------gcg---------------------------atcgtGAAG-T---AC
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                              1505  65 -     27731 a--gg--ca----ag-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--agg-----------------------gaca-----cact---tta---cgtc------------atgatcg-------c---g------------gtg---------------------------atcgtGAAG-TATGA-
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                1630  65 +      3134 a--gg--ca----ag-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--agg-----------------------gaca-----cact---tta---cgtc------------atgatcg-------c---g------------gtg---------------------------atcgtGAAG-TATGA-
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               1765  65 -     45847 a--gg--ca----ag-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--agg-----------------------gaca-----cact---ttg---cgtt------------atgatcg-------c---a------------gtg---------------------------attgtGAAG-TATGA-
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                22971  65 +     25266 a--gg--ca----ag-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--agg-----------------------gaca-----cact---tta---tgtc------------atgatcg-------c---g------------gtg---------------------------atcgtGAAG-TATGA-
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           2155  65 +      2906 a--gg--ca----ag-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--agg-----------------------gaca-----cact---tta---tgtc------------atgatcg-------c---g------------gtg---------------------------atcgtGAAG-TATGA-
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            16268  65 -     18578 a--gg--ca----ag-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--agg-----------------------gaca-----cact---tta---cgtc------------atgatcg-------t---g------------gtg---------------------------atCATGAAG-TATGA-
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              1655  65 +     47717 a--gg--ca----ag-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--agg-----------------------gaca-----cact---ttg---cgtc------------atgatca-------c---g------------gtg---------------------------atcgtGAAG-TATGA-
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             1785  65 -      3544 a--gg--ca----ag-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--agg-----------------------gaca-----cact---tta---cgtc------------atgatcg-------c---g------------gtg---------------------------atcgtGAAG-TATGA-
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             13005  65 +     50774 a--gg--ca----ag-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--agg-----------------------gaca-----cact---tta---tgtc------------atgatcg-------c---g------------gtg---------------------------atcgtGAAG-TATGA-
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184196  43 +    412891 a--gg--ca----cgag-----------g---------a-aa--a---t-t-tg-gg-g-gg---t---------------g--atg-----------------------aaaa-----tgtt---cta---tata-----------------------------------------------------------------------------------------
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 76
s Aotus_azarae.k141_3104676                                  13641  50 -     33861 --------------------------------------------------t--tgg--g-gg---t---------------g--agg-----------------------gaca-----catt---ttg---cgtc------------atgatcg-------t---g------------gtg---------------------------atcgtGAAG-C---A-
i Aotus_azarae.k141_3104676                              I 12 C 0
s Aotus_griseimembra.k141_2240599                            13661  50 -     34016 --------------------------------------------------t--tgg--g-gg---t---------------g--agg-----------------------gaca-----catt---ttg---catc------------atgattg-------t---g------------gtg---------------------------atcgtGAAG-C---A-
i Aotus_griseimembra.k141_2240599                        I 12 C 0
s Aotus_nancymaae.KZ198451.1                               4296058  50 -   5030052 --------------------------------------------------T--TGG--G-GG---T---------------G--AGG-----------------------GACA-----CATT---TTG---CGTC------------ATGATTG-------T---G------------GTG---------------------------ATCGTAAAG-c---a-
i Aotus_nancymaae.KZ198451.1                             I 12 C 0
s Aotus_trivirgatus.k141_2152450                             13663  50 -     34685 --------------------------------------------------t--tgg--g-gg---t---------------g--agg-----------------------gaca-----catt---ttg---catc------------atgattg-------t---g------------gtg---------------------------atcgtGAAG-C---A-
i Aotus_trivirgatus.k141_2152450                         I 12 C 0
s Aotus_vociferans.k141_344750                               26784  50 -     47192 --------------------------------------------------t--tgg--g-gg---t---------------g--agg-----------------------gaca-----tatt---ttg---cgtc------------atgattg-------t---g------------gtg---------------------------atCATGAAG-C---A-
i Aotus_vociferans.k141_344750                           I 12 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      10587  66 +     20879 a--gg--ca----tg-g-----------a---------a-aat-----t-t-gg-g--g-tgt--t---------------a--atg-----------------------aaaa-----cgtt---cca---tatc------------ttgatta-------t---a------------gta---------------------------gtagttaag-t---ac
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 67
s Arctocebus_calabarensis.k141_2318572                        9863  65 +     14667 a--gt--ca----gg-a-----------g---------g-aat-----t-t--a-g--g-gg---t--------------tg--gga-----------------------gaga-----ttct---ctg---tatc------------ttggttg-------t---g------------ggg---------------------------gtagttaag-c---at
i Arctocebus_calabarensis.k141_2318572                   C 0 I 149
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3609  42 +     43469 a--gg--ca----caag-----------g---------a-aa--a---t-t-tg-g--g-gt---t---------------g--atg-----------------------aaaa-----tgtt---cta---tata-----------------------------------------------------------------------------------------
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 76
s Avahi_laniger.k141_765380                                  52421  32 -     92717 --------------------------------------------------------------------------------------------------------------------------t---ctg---tatc------------tttgttg-------t---g------------ctg---------------------------gtagttaag-c---ac
i Avahi_laniger.k141_765380                              I 31 I 70
s Avahi_peyrierasi.k141_1424874                              53050  32 +     85213 --------------------------------------------------------------------------------------------------------------------------t---ctg---tatc------------tttgttg-------t---g------------ctg---------------------------gtagttaag-c---ac
i Avahi_peyrierasi.k141_1424874                          I 31 I 70
s Callibella_humilis.k141_1278103                             3401  51 -     10423 --------------------------------------------------t--t-g--g-g----t---------------g--agg-----------------------gaca-----catt---ctg---cgtc------------atgatcg-------c---g------------gtg---------------------------atCATGAAG-TATGA-
i Callibella_humilis.k141_1278103                        I 12 C 0
s Callimico_goeldii.k141_1091182                             22902  52 +     31915 --------------------------------------------------t--t-g--g-gg---t---------------g--agg-----------------------gaca-----catt---ctg---cctc------------acgatca-------c---g------------gtg---------------------------atCATGAAG-TTTGA-
i Callimico_goeldii.k141_1091182                         I 12 C 0
s Callithrix_geoffroyi.k119_512088                            3371  52 +      5267 --------------------------------------------------t--t-g--g-gg---t---------------g--agg-----------------------gaca-----catt---ctg---cgtc------------atgatcg-------c---g------------gtg---------------------------atcgtGAAG-TATGA-
i Callithrix_geoffroyi.k119_512088                       I 12 C 0
s Callithrix_jacchus.pat_scaffold_3                       23588585  52 - 189096842 --------------------------------------------------T--T-G--G-GG---T---------------G--AGG-----------------------GACA-----CATT---CTG---CGTC------------ATGATCG-------C---G------------GTG---------------------------ATCGTGAAG-TATGA-
i Callithrix_jacchus.pat_scaffold_3                      I 12 C 0
s Callithrix_kuhlii.k119_1164682                             10115  52 -     12001 --------------------------------------------------t--t-g--g-gg---t---------------g--agg-----------------------gaca-----catt---ctg---cgtc------------atgatcg-------c---g------------gtg---------------------------atcgtGAAG-TATGA-
i Callithrix_kuhlii.k119_1164682                         I 12 C 0
s Camelus_bactrianus.KN276810.1                           10001526  52 -  17673402 --------------------------------------------------t-tg-g-ag-gg---a---------------g--ata-----------------------gaca-----tatt---cta---tatt------------ttgattg-------t---g------------gtg---------------------------atggttaag-t---at
i Camelus_bactrianus.KN276810.1                          I 15 I 55
s Camelus_dromedarius.KN272107.1                           2333984  52 -   7040546 --------------------------------------------------t-tg-g-ag-gg---a---------------g--ata-----------------------gaca-----tatt---cta---tatt------------ttgattg-------t---g------------gtg---------------------------atggttaag-t---at
i Camelus_dromedarius.KN272107.1                         I 15 I 55
s Camelus_ferus.KB017975.1                                  402267  52 -   1652518 --------------------------------------------------t-tg-g-ag-gg---a---------------g--ata-----------------------gaca-----tatt---cta---tatt------------ttgattg-------t---g------------gtg---------------------------atggttaag-t---at
i Camelus_ferus.KB017975.1                               I 15 I 55
s CanFam4.chr16                                           17798315  50 -  60362399 -----------------------------------------------------t-ag-g-gg---t---------------g--atg-----------------------gaaa-----agtt---cta---tatc------------ttgatga-------t---g------------gca---------------------------gtagttaag-t---at
i CanFam4.chr16                                          I 16 I 55
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184372  50 -    185531 -----------------------------------------------------t-ag-g-gg---t---------------g--atg-----------------------gaaa-----agtt---cta---tatc------------ttgatga-------t---g------------gca---------------------------gtagttaag-t---at
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 16 I 55
s Canis_lupus_dingo.QKWQ01000480.1                         9033758  50 -   9314153 -----------------------------------------------------t-ag-g-gg---t---------------g--atg-----------------------gaaa-----agtt---cta---tatc------------ttgatga-------t---g------------gca---------------------------gtagttaag-t---at
i Canis_lupus_dingo.QKWQ01000480.1                       I 16 I 55
s Canis_lupus_familiaris.chr16                            17958023  50 -  59632846 -----------------------------------------------------t-ag-g-gg---t---------------g--atg-----------------------gaaa-----agtt---cta---tatc------------ttgatga-------t---g------------gca---------------------------gtagttaag-t---at
i Canis_lupus_familiaris.chr16                           I 16 I 55
s Canis_lupus_orion.HG994398.1                            18499535  50 +  63665305 -----------------------------------------------------t-ag-g-gg---t---------------g--atg-----------------------gaaa-----agtt---cta---tatc------------ttgatga-------t---g------------gca---------------------------gtagttaag-t---at
i Canis_lupus_orion.HG994398.1                           I 16 I 55
s Carlito_syrichta.NW_007259797.1                           154673  68 -    496798 AGTGG--CG----GG-G-----------A------GGGG-AA------T-C--G-G--G-GG---C---------------A--aga-----------------------gaaa-----tgtt---ctg---tatc------------ttgattg-------t---g------------gtg---------------------------gtagcGACG-G---AC
i Carlito_syrichta.NW_007259797.1                        C 0 I 146
s Carollia_perspicillata.CarPer_scaffold_92756                3971  43 -     11696 a--gg--ca----cagg-----------g---------a-aa--a---t-c-gg-gg-g-gt---t---------------g--atg-----------------------aaaa-----tgtt---cta---tatg-----------------------------------------------------------------------------------------
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 76
s Castor_canadensis.CasCan_scaffold_2074                    136602  35 +    179628 --------------------------------------------------------------------------------------------------------------------------TGTTCTA---CATC------------TTAATTA-------T---G------------ATG---------------------------ACAGTTAAG-T---AC
i Castor_canadensis.CasCan_scaffold_2074                 I 334 I 87
s Catagonus_wagneri.CatWag_scaffold_2839                     92135  41 +    217609 g--ag--ca----caag-----------g---------g-aa--a---a-t--t-gg-g-gg---t---------------a--acg-----------------------gaaa-----tctg---cta---tat------------------------------------------------------------------------------------------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 78
s Cebuella_niveiventris.k141_1251222                          8025  52 -     11392 --------------------------------------------------t--t-g--g-gg---t---------------g--agg-----------------------gaca-----catt---ctg---cgtc------------atgatcg-------c---g------------gtg---------------------------atCATGAAG-TATGA-
i Cebuella_niveiventris.k141_1251222                     I 12 C 0
s Cebuella_pygmaea.k141_1309012                               4123  52 -      7577 --------------------------------------------------t--t-g--g-gg---t---------------g--agg-----------------------gaca-----cgtt---ctg---cgtc------------atgatcg-------t---g------------gtg---------------------------atcgtGAAG-TATGA-
i Cebuella_pygmaea.k141_1309012                          I 12 C 0
s Cebus_olivaceus.k141_1000828                                2084  28 -      2944 --------------------------------------------------------------------------------------------------------------------------------------TC------------ACGATCA-------C---G------------GTG---------------------------ATCGTGAAG-TATGA-
i Cebus_olivaceus.k141_1000828                           I 231 C 0
s Cephalopachus_bancanus.k141_1423433                         4183  68 +     31688 agtgg--cg----gg-g-----------ag-----g-ag-aa------t-c--g-g--g-gg---c---------------a--aga-----------------------gaaa-----tatt---ctg---tatc------------ttgattg-------t---g------------gtg---------------------------gtagctaag-g---ac
i Cephalopachus_bancanus.k141_1423433                    C 0 I 70
s Ceratotherium_simum.JH767749.1                          12230560  65 +  27778364 a--gg--ca----caag-----------g---------g-aa--a---t-t-tt-gg-g-gg---t---------------g--atg-----------------------aaag-----tgtt---ct-----gtc------------ttgattg-------t---g------------gtg---------------------------gtggttaag-t---at
i Ceratotherium_simum.JH767749.1                         C 0 I 56
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1587  65 -     25243 a--gg--ca----caag-----------g---------g-aa--a---t-t-tt-gg-g-gg---t---------------g--atg-----------------------aaag-----tgtt---ct-----gtc------------ttgattg-------t---g------------gtg---------------------------gtggttaag-t---at
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 I 56
s Cercocebus_atys.KQ010504.1                               4473658  63 +   4669795 A--GG--CA----GG-G-----------A---------G-AA------G-T--G-G--G-GG---T---------------G--ACG-----------------------GGCA-----CATT---CTG---CATC------------ATGATTG-------C---G------------GCT---------------------------ATCGTGAAG-T---AC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        12207  63 -     19203 a--gg--ca----gg-g-----------a---------g-aa------g-t--g-g--g-gg---t---------------g--acg-----------------------ggca-----catt---ctg---catc------------atgattg-------c---g------------gcg---------------------------atCATGAAG-T---AC
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           6629  63 +      8260 a--gg--ca----gg-g-----------a---------g-aa------g-t--g-g--g-gg---t---------------g--acg-----------------------gaca-----catt---ctg---catc------------atgattg-------c---g------------gCT---------------------------ATCGTGAAG-T---AC
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           6855  63 +     27781 a--gg--ca----gg-g-----------a---------g-aa------g-t--g-g--g-gg---t---------------g--acg-----------------------ggca-----catt---ctg---catc------------atgattg-------c---g------------gcg---------------------------atcgtGAAG-T---AC
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         7014  63 -     20310 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--acg-----------------------ggca-----catt---ctg---catc------------atgattg-------c---g------------gcg---------------------------atcgtGAAG-T---AC
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                           9993  63 +     29689 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--acc-----------------------ggca-----catt---ctg---catc------------atgattg-------c---g------------gcg---------------------------atcgtGAAG-T---AC
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            4424  63 +      9989 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--acc-----------------------ggca-----catt---ctg---catc------------atgattg-------c---g------------gcg---------------------------atcgtGAAG-T---AC
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          12672  63 -     27936 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--acc-----------------------ggca-----catt---ctg---catc------------atgattg-------c---g------------gcg---------------------------atcgtGAAG-T---AC
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            1538  63 -     17152 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--acc-----------------------ggca-----catt---ctg---catc------------atgattg-------c---g------------gCA---------------------------ATCGTGAAG-T---AC
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38815076  63 +  39242232 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--acc-----------------------tgca-----catc---ctg---catc------------atgattg-------c---g------------gcg---------------------------atcgtGAAG-T---AC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21220767  63 -  21565898 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--act-----------------------ggca-----catt---ctg---catc------------atgattg-------c---g------------gCA---------------------------ATCGTGAAG-T---AC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       37885  63 -     53127 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--acc-----------------------ggca-----catt---ctg---catc------------atgattg-------c---g------------gcg---------------------------atcgtGAAG-T---AC
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        5156  63 +      7159 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--acc-----------------------tgca-----catc---ctg---catc------------atgattg-------c---g------------gcg---------------------------atcgtGAAG-T---AC
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       12688  63 -     27947 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--acc-----------------------ggca-----catt---ctg---catc------------atgattg-------c---g------------gcg---------------------------atcgtGAAG-T---AC
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         12661  63 +     17596 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--acc-----------------------ggca-----catt---ctg---catc------------atgattg-------c---g------------gCA---------------------------ATCGTGAAG-T---AC
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          1895  63 +     26000 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--atg-----------------------ggca-----catt---ctg---catc------------atgattg-------c---g------------gcg---------------------------atcgtGAAG-T---AC
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_713168             204   2 -      2554 ------------------------------------------------------------------------------------------------------------------------------ct-------------------------------------------------------------------------------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_713168       I 9 C 0
s Cheirogaleus_major.k141_333249                             19799  64 -     52598 a--gg--ca----gg-a-----------g---------g-aat-----t-t--g-g--g-gg---t---------------a--aca-----------------------gaaa-----tgtt---cta---tatc------------ttggttg-------t---g------------gtg---------------------------atagttaag-c---ac
i Cheirogaleus_major.k141_333249                         C 0 I 116
s Cheirogaleus_medius.k141_1055463                           15150  64 +     57038 a--gg--ca----gg-a-----------g---------g-aat-----t-t--g-g--g-gg---t---------------a--aca-----------------------gaaa-----tgtt---cta---tatc------------ttggttg-------t---g------------gtg---------------------------atagttaag-c---ac
i Cheirogaleus_medius.k141_1055463                       C 0 I 120
s Chiropotes_albinasus.k141_2813271                           9347   9 +     11226 A--GG--CA----CG-G-----------A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Chiropotes_albinasus.k141_2813271                      C 0 I 381
s Chlorocebus_aethiops.ctg25                              18426645  63 -  18827391 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--acg-----------------------ggca-----catt---ctg---catc------------atgattg-------c---g------------gcg---------------------------atcgtGAAG-T---AT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       13082  63 -     50209 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--acg-----------------------ggca-----catt---ctg---catc------------atgattg-------c---g------------gcg---------------------------atcgtGAAG-T---AT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135420082  63 + 135778131 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-GG---T---------------G--ACG-----------------------GGCA-----CATT---CTG---CATC------------ATGATTG-------C---G------------GCG---------------------------ATCGTGAAG-T---AT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 16987  65 +     19366 ----------------------------ggcacaaggga-act-----t-t-gg-g--g-gt---g---------------a--agg-----------------------a-aa-----taat---at-ata--tc------------tcaattg-------t---g------------gtg---------------------------gtgcttgac-t---ac
i Choloepus_didactylus.ChoDid_scaffold_45914             I 1 I 108
s Choloepus_hoffmanni.KN194906.1                            172087  65 +    839153 ----------------------------ggcacaaggga-act-----t-t-gg-g--g-gt---g---------------a--agg-----------------------a-aa-----taat---at-ata--tc------------tcaattg-------t---g------------gtg---------------------------gtgcttgac-t---ac
i Choloepus_hoffmanni.KN194906.1                         I 1 I 108
s Colobus_angolensis.KN981557.1                            1908596  63 +   2368649 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-GG---T---------------G--ACG-----------------------GGCA-----CATT---CTG---CATC------------ATGATTG-------C---G------------GCG---------------------------ATCGTGAAG-T---AC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199948275  63 + 200372422 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--acg-----------------------ggca-----catt---ctg---catc------------atgattg-------c---g------------gcg---------------------------atcgtGAAG-T---AC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              35134  63 +     84244 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--acg-----------------------ggca-----catt---ctg---catc------------atgattg-------c---g------------gcg---------------------------atcgtGAAG-T---AC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          13435  67 -     20389 a--ga--ca----taag-----------g---------a-aa--a---t-t-tg-gg-g-gg---t---------------a--aca-----------------------taaa-----tgta---tta---tatc------------ttgatta-------t---g------------gtg---------------------------gtggtaaag-t---ac
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 50
s Cricetomys_gambianus.CriGam_scaffold_18520                 48806  28 +     63868 g--gg--aa----gg-gagacctcag--a---------a-att-----tag-aa-g-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Cricetomys_gambianus.CriGam_scaffold_18520             I 647 I 457
s Cricetulus_griseus.LT883664.1                           11666245  24 + 224834208 A--GG--AA----GA-GAGACCTTGG--G---------AAAC-----GT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Cricetulus_griseus.LT883664.1                          I 763 I 486
s Crocidura_indochinensis.CroInd_scaffold_37019               1733  69 -     19598 -----------------------------------------A-----AT-TCAG-G--G-GG---TGGTAATTATAGAAATA--ATA-----------------------TAAAGTTACAATT---TT---ATATC------------TTGT-TT-G-----T---G------------GTA---------------------------GTTGTT----------
i Crocidura_indochinensis.CroInd_scaffold_37019          I 10 I 50
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27613  51 -     87169 -----------------------------------------------------g-gggg-gg---t---------------g--acg-----------------------gaaa-----tgtt---ctg---tatc------------ttgatta-------t---g------------gtg---------------------------gtggttaag-t---ac
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 17 I 55
s Ctenodactylus_gundi.CteGun_scaffold_65                    835842  49 +   1526836 -----------------------------------------------------G-G--G-AA---G---------------A--ATA-----------------------AAAA-----AAAT---CTG---CATC------------TTAAAAA-------T---G------------GTG---------------------------GTACTTAAG-T---AC
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 16 I 74
s Dasypus_novemcinctus.JH564415.1                            62457  16 +   2246927 -------------------------------------------------------g--a-gg---g---------------a--agg-----------------------a-at-----ttat------------------------------------------------------------------------------------------------------
i Dasypus_novemcinctus.JH564415.1                        I 174 I 5
s Daubentonia_madagascariensis.ctg71                      12536015  64 -  12879189 a--gg--ca----ga-a-----------g---------g-aat-----t-t--g-g--g-gg---t---------------a--aca-----------------------gaaa-----tgtt---cta---tatc------------ttggttg-------t---g------------gtg---------------------------gtagttaag-c---ac
i Daubentonia_madagascariensis.ctg71                     C 0 I 66
s Desmodus_rotundus.KZ672289.1                             8628987  43 +  20541912 a--gg--ca----cgag-----------g---------a-aa--a---t-c-tg-gg-g-gg---t---------------g--atg-----------------------aaaa-----tgtt---cta---tata-----------------------------------------------------------------------------------------
i Desmodus_rotundus.KZ672289.1                           C 0 I 76
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672410  65 +   1390856 a--gg--ca----caag-----------g---------g-aa--a---t-t-tt-gg-g-gg---t---------------g--atg-----------------------aaag-----tgtt---ct-----gtc------------ttgattg-------t---g------------gtg---------------------------ggggttaag-t---at
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 56
s Diceros_bicornis.DicBicMic_scaffold_5955                    5163  65 +    198055 a--gg--ca----caag-----------g---------g-aa--a---t-t-tt-gg-g-cg---t---------------g--atg-----------------------aaag-----tgtt---ct-----gtc------------ttgattg-------t---g------------gtg---------------------------gtggttaag-t---at
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 56
s Eidolon_helvum.KE759718.1                                   9640  67 +     11740 a--gg--ca----caag-----------a---------g-aa--a---t-t-tt-g-ag-gg---t---------------g--ata-----------------------taaa-----tgta---cta---tatt------------ttgattg-------t---g------------gtg---------------------------atggtgaag-t---aa
i Eidolon_helvum.KE759718.1                              C 0 I 55
s Enhydra_lutris.KZ291758.1                               16328449  50 -  41312741 -----------------------------------------------------t-g-ag-gg---t---------------g--atg-----------------------gaaa-----tgtt---cgg---tatc------------ttgatta-------c---a------------aca---------------------------gtggttaag-t---ac
i Enhydra_lutris.KZ291758.1                              I 17 I 55
s Ellobius_lutescens.LOEQ01008920.1                          19022  23 -    110024 A--GG--AA----GA-GAAACCTTGA--G---------A-AT-----GT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Ellobius_lutescens.LOEQ01008920.1                      I 1359 I 777
s Ellobius_talpinus.LOJH01109367.1                            5103  23 -      6299 A--GG--AA----GA-GAAACCTTGA--G---------A-AT-----GT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Ellobius_talpinus.LOJH01109367.1                       I 1386 I 789
s Eptesicus_fuscus.JH977646.1                              2144551  70 -  14770903 a--ga--ca----taag-----------c---------g-gg-g----t-t-tg-gg-a-gg---t---------------a--atg-----------------------gaaa-----tgtt---cta---tgtc------------ttggttg-------t---g------------gag---------------------a---tggtggtgaag-t---at
i Eptesicus_fuscus.JH977646.1                            C 0 I 55
s Equus_asinus.JREZ01000139.1                              1282472  67 +   4378816 a--gg--ca----caag-----------g---------g-aa--a---t-t-tt-ag-g-gg---t---------------g--atg-----------------------gaaa-----ggtt---cta---tgtc------------ttgattg-------t---g------------gtg---------------------------gtggtgaag-t---at
i Equus_asinus.JREZ01000139.1                            C 0 I 55
s Equus_caballus.CM000403.2                               18530293  67 -  39960074 a--gg--ca----caag-----------a---------g-aa--a---t-t-tt-ag-g-gg---t---------------g--atg-----------------------gaaa-----ggtt---cta---tgtc------------ttgattg-------t---g------------gtg---------------------------gtggtgaag-t---at
i Equus_caballus.CM000403.2                              C 0 I 55
s Equus_przewalskii.KK951119.1                               32308  67 +    498745 a--gg--ca----caag-----------a---------g-aa--a---t-t-tt-ag-g-gg---t---------------g--atg-----------------------gaaa-----ggtt---cta---tgtc------------ttgattg-------t---g------------gtg---------------------------gtggtgaag-t---at
i Equus_przewalskii.KK951119.1                           C 0 I 55
s Erythrocebus_patas.Contig38                             21203253  63 -  21539334 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--acg-----------------------ggca-----catt---ctg---catc------------atgattg-------c---g------------gcg---------------------------atcgtGAAG-T---AC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              12495  64 -     14127 a--gg--ca----gg-a-----------g---------g-aat-----t-t--g-g--g-gg---t---------------a--aca-----------------------gaaa-----tgtt---cta---tatc------------ttggttg-------t---g------------gtg---------------------------gtagttaag-c---ac
i Eulemur_albifrons.k141_342033                          C 0 I 70
s Eulemur_collaris.k141_377015                                5193  64 -     16928 a--gg--ca----gg-a-----------g---------g-aat-----t-t--g-g--g-gg---t---------------a--aca-----------------------gaaa-----tgtt---cta---tatc------------ttggttg-------t---g------------gtg---------------------------gtagttaag-c---ac
i Eulemur_collaris.k141_377015                           C 0 I 70
s Eulemur_coronatus.k141_885031                              14222  64 -     25546 a--gg--ca----gg-a-----------g---------g-aat-----t-t--g-g--g-ga---t---------------a--aca-----------------------gaaa-----tgtt---cta---tatc------------ttggttg-------t---g------------gtg---------------------------gtagttaag-c---ac
i Eulemur_coronatus.k141_885031                          C 0 I 70
s Eulemur_flavifrons.k141_1184614                            11420  64 +     26330 a--gg--ca----gg-a-----------g---------g-aat-----t-t--g-g--g-gg---t---------------a--aca-----------------------gaaa-----tgtt---cta---tatc------------ttggttg-------t---g------------gtg---------------------------gtagttaag-c---ac
i Eulemur_flavifrons.k141_1184614                        C 0 I 70
s Eulemur_fulvus.k141_544389                                 12660  64 +     23973 a--gg--ca----gg-a-----------g---------g-aat-----t-t--g-g--g-gg---t---------------a--aca-----------------------gaaa-----tgtt---cta---tatc------------ttggttg-------t---g------------gtg---------------------------gtagttaag-c---ac
i Eulemur_fulvus.k141_544389                             C 0 I 70
s Eulemur_macaco.k141_1562045                                11420  64 +     75513 a--gg--ca----gg-a-----------g---------g-aat-----t-t--g-g--g-gg---t---------------a--aca-----------------------gaaa-----tgtt---cta---tatc------------ttggttg-------t---g------------gtg---------------------------gtagttaag-c---ac
i Eulemur_macaco.k141_1562045                            C 0 I 70
s Eulemur_mongoz.k141_232305                                  9358  64 +     97555 a--gg--ca----gg-a-----------g---------g-aat-----t-t--g-g--g-gg---t---------------a--aca-----------------------gaaa-----tgtt---cta---tatc------------ttggttg-------t---g------------gtg---------------------------gtagttaag-c---ac
i Eulemur_mongoz.k141_232305                             C 0 I 70
s Eulemur_rubriventer.k141_571033                            12277  64 +     26496 a--gg--ca----gg-a-----------g---------g-aat-----t-t--g-g--g-gg---t---------------a--aca-----------------------gaaa-----tgtt---cta---tatc------------ttggttg-------t---g------------gtg---------------------------gtagttaag-c---ac
i Eulemur_rubriventer.k141_571033                        C 0 I 70
s Eulemur_rufus.k141_1476633                                  2895  64 -     17153 a--gg--ca----gg-a-----------g---------g-aat-----t-t--g-g--g-gg---t---------------a--aca-----------------------gaaa-----tgtt---cta---tatc------------ttggttg-------t---g------------gtg---------------------------gtagttaag-c---ac
i Eulemur_rufus.k141_1476633                             C 0 I 70
s Eulemur_sanfordi.k141_1122526                              12471  64 +    111500 a--gg--ca----gg-a-----------g---------g-aat-----t-t--g-g--g-gg---t---------------a--aca-----------------------gaaa-----tgtt---cta---tatc------------ttggttg-------t---g------------gtg---------------------------gtagttaag-c---ac
i Eulemur_sanfordi.k141_1122526                          C 0 I 70
s Galago_moholi.ctg2040                                     424814  65 -    453645 a--gt--ca----gg-a-----------g---------g-aat-----t-t--g-g--g-gg---t--------------ta--gga-----------------------gaaa-----tgct---ctc---tatc------------ttggttg-------t---g------------ggg---------------------------gtggttaag-c---ac
i Galago_moholi.ctg2040                                  C 0 I 145
s Galago_senegalensis.k141_631886                             2521  65 +     11339 a--gt--ca----gg-a-----------g---------g-aat-----t-t--g-g--g-gg---t--------------ta--gga-----------------------gaaa-----tgct---ctc---tatc------------ttggttg-------t---g------------ggg---------------------------gtggttaag-c---ac
i Galago_senegalensis.k141_631886                        C 0 I 145
s Galagoides_demidoff.k141_1959596                            6329  65 +      6795 a--gt--ca----gg-a-----------a---------g-aat-----t-t--g-g--g-gg---t--------------ta--gga-----------------------gaaa-----tgct---ctc---tatc------------ttagttg-------t---g------------ggg---------------------------gtggttaag-c---ac
i Galagoides_demidoff.k141_1959596                       C 0 I 144
s Galeopterus_variegatus.GalVar_scaffold_416291                814  66 +      1204 a--ag-aaa----gg-g-----------g---------a-aat-----t-t-ag-g--g-ag---c---------------a--atg-----------------------aaaa-----tatt---ctg---tatc------------ttgattg-------t---g------------gtg---------------------------gtagtttag-t---ac
i Galeopterus_variegatus.GalVar_scaffold_416291          I 290 I 66
s Gorilla_beringei.k141_3596273                              14043  63 -     32273 a--gg--ca----gg-g-----------a---------a-aa------t-t--g-g--g-gg---t---------------g--acg-----------------------gaca-----catt---ctg---catc------------atgattg-------c---g------------gcg---------------------------atcgtGAAG-T---AC
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.CYUI03001814.1                             30555  64 -     31004 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--acg-----------------------gaca-----catt---ctg---catc------------atgattg-------c---g------------gcg---------------------------atcgtGAAG-TA--AC
i Gorilla_gorilla.CYUI03001814.1                         C 0 n 0
s Hapalemur_alaotrensis.k141_170648                           5550  64 -     19426 a--ag--ca----gg-a-----------g---------g-aat-----t-t--g-g--g-gg---t---------------a--aca-----------------------gaaa-----tgtt---cta---tatc------------ttggttg-------t---g------------gtg---------------------------gtagttaag-c---ac
i Hapalemur_alaotrensis.k141_170648                      C 0 I 70
s Hapalemur_gilberti.k141_488810                             10699  64 -     15286 a--gg--ca----gg-a-----------g---------g-aat-----t-t--g-g--g-gg---t---------------a--aca-----------------------gaaa-----tgtt---cta---tatc------------ttggttg-------t---g------------gtg---------------------------gtagttaag-c---ac
i Hapalemur_gilberti.k141_488810                         C 0 I 70
s Hapalemur_griseus.k141_1511508                             12338  64 +     18253 a--ag--ca----gg-a-----------g---------g-aat-----t-t--g-g--g-gg---t---------------a--aca-----------------------gaaa-----tgtt---cta---tatc------------ttggttg-------t---g------------gtg---------------------------gtagttaag-c---ac
i Hapalemur_griseus.k141_1511508                         C 0 I 70
s Hapalemur_meridionalis.k141_248335                         12439  64 -     41752 a--gg--ca----gg-a-----------g---------g-aat-----t-t--g-g--g-gg---t---------------a--aca-----------------------gaaa-----tgtt---cta---tatc------------ttggttg-------t---g------------gtg---------------------------gtagttaag-c---ac
i Hapalemur_meridionalis.k141_248335                     C 0 I 70
s Hapalemur_occidentalis.k141_907772                         12277  64 -     16460 a--ag--ca----gg-a-----------g---------g-aat-----t-t--g-g--g-gg---t---------------a--aca-----------------------gaaa-----tgtt---cta---tatc------------ttggttg-------t---g------------gtg---------------------------gtagttaag-c---ac
i Hapalemur_occidentalis.k141_907772                     C 0 I 70
s Helogale_parvula.HelPar_flattened_line_2585               241450  51 +    327341 -----------------------------------------------------g-ggag-gg---t---------------g--atg-----------------------gaaa-----tgct---ctg---tatc------------ttgatta-------t---g------------gtg---------------------------gtgattaag-t---ac
i Helogale_parvula.HelPar_flattened_line_2585            I 17 I 55
s Heterohyrax_brucei.HetBruBak_scaffold_384612                 230  67 -       958 G--GGTGCA----AGGC-----------A---------A-AG-----TT-T-TG-A--G-GT---G---------------A--ATG-----------------------A-AA-----TACC---CTA---GGTA------------TTGACTG-------T---G------------TTG---------------------------GTCATTAAC-T---AT
i Heterohyrax_brucei.HetBruBak_scaffold_384612           C 0 I 328
s Hipposideros_armiger.JXIK01000431.1                       110907  67 +   1711038 a--gg--ca----tgag-----------g---------g-aa--a---t-t-tg-gg-g-gg---t---------------g--atg-----------------------gaaa-----tgta---cta---tatc------------ttgattg-------t---g------------gtg---------------------------gtggtgaag-c---AT
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 61
s Hipposideros_galeritus.HipGal_scaffold_29171               42336  67 +     43066 a--gg--ca----cgag-----------g---------g-aa--a---t-t-tt-gg-g-gg---t---------------g--atg-----------------------gaaa-----tgta---cta---tatc------------ctgattg-------t---g------------gtg---------------------------gtggtgaag-t---at
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 I 64
s Hoolock_leuconedys.ctg274                                    432857  63 +    630532 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--aca-----------------------gaca-----catt---ctg---catc------------atgattg-------C---A------------GCA---------------------------ATTGTGAAG-T---AC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  43611  47 +     55795 ----------------------------------------------------------g-gg---a---------------g--gtg-----------------------gaaa-----tgtt---ctg---tatc------------ttgatta-------t---g------------gtg---------------------------gtgggtaag-t---ac
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 39 I 55
s Hylobates_agilis.k141_232023                                 623  63 -     12752 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--aca-----------------------gaca-----catt---ctg---catc------------atgattg-------c---a------------gca---------------------------attgtgacg-t---ac
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                                667  63 +     14092 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--aca-----------------------gaca-----catt---ctg---catc------------atgattg-------c---a------------gca---------------------------attgtgacg-t---ac
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189541450  63 - 191637585 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--aca-----------------------gaca-----catt---ctg---catc------------atgattg-------c---a------------gca---------------------------attgtgacg-t---ac
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3334344  63 -  11177569 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--aca-----------------------gaca-----catt---ctg---catc------------atgattg-------c---a------------gca---------------------------attgtgacg-t---ac
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7518615  49 -   7955117 -------------------------------------------------------g--g-ag--ct---------------a--ata-----------------------aaaa-----tgtt---cca---tatc------------ttgattg-------t---g------------gta---------------------------gtagttaaa-c---ac
i Ictidomys_tridecemlineatus.JH393364.1                  I 16 I 66
s Indri_indri.k141_3655594                                   21242  64 +     31101 a--gg--ca----gg-a-----------g---------g-aat-----t-t--g-g--g-gg---t---------------a--aca-----------------------gaaa-----tgtt---cta---tatc------------ttcattg-------t---g------------gtg---------------------------gtagttaag-c---ac
i Indri_indri.k141_3655594                               C 0 I 70
s Lasiurus_borealis.LasBor_scaffold_50988                    12425  54 +     29960 a--ga--cc----ca-g-----------g---------g-at--a---c-t-tg-gg-a-gg---t---------------a--atg-----------------------gaaa-----tgtc---cta---tgtc------------ttggttg-------t---g------------gag-------------------------------------------
i Lasiurus_borealis.LasBor_scaffold_50988                I 5 I 3019
s Lemur_catta.scaffold_24                                 15522782  64 -  30322482 a--gg--cg----gg-a-----------g---------g-aat-----t-t--g-g--g-ga---t---------------a--aca-----------------------gaaa-----tgtt---cta---tatc------------ttggttg-------t---g------------gtg---------------------------gtagttaag-c---ac
i Lemur_catta.scaffold_24                                C 0 I 70
s Leontocebus_fuscicollis.k141_1820339                        5725  52 +     64341 --------------------------------------------------t--t-g--g-gg---t---------------g--agg-----------------------gaga-----catt---ctg---cgtc------------atgatcg-------c---g------------gtg---------------------------atcgtGAAG-TATGA-
i Leontocebus_fuscicollis.k141_1820339                   I 12 I 22
s Leontocebus_illigeri.k141_3350179                           3052  52 +      4941 --------------------------------------------------T--T-G--G-GG---T---------------G--AGG-----------------------GAGA-----CATT---CTG---CGTC------------ATGATCG-------C---A------------GTG---------------------------ATCGTGAAG-TATGA-
i Leontocebus_illigeri.k141_3350179                      I 12 I 22
s Leontocebus_nigricollis.k141_4610752                        5768  52 +     35603 --------------------------------------------------T--T-G--G-GG---T---------------G--AGG-----------------------GAGA-----CATT---CTG---CGTC------------ATGATCG-------C---G------------GTG---------------------------ATCGTGAAG-TATGA-
i Leontocebus_nigricollis.k141_4610752                   I 12 I 22
s Leontopithecus_chrysomelas.k141_1519602                    27195  52 +     38576 --------------------------------------------------t--t-g--g-ag---t---------------g--agg-----------------------gaca-----catt---ctg---catc------------atgatcg-------t---G------------GCG---------------------------ATCGTGAAG-TATGA-
i Leontopithecus_chrysomelas.k141_1519602                I 12 C 0
s Leontopithecus_rosalia.k141_464620                         23892  52 +     66356 --------------------------------------------------T--T-G--G-AG---T---------------G--AGG-----------------------GACA-----CATT---CTG---CATC------------ATGATCG-------T---G------------GCG---------------------------ATCGTGAAG-TATGA-
i Leontopithecus_rosalia.k141_464620                     I 12 C 0
s Lepilemur_ankaranensis.k141_596936                          9690  64 -     23766 a--ag--aa----gg-a-----------g---------g-aat-----t-t--g-g--g-gg---t---------------a--aca-----------------------gaaa-----tgtt---cta---tctc------------ttggttg-------t---g------------gtg---------------------------atagttaag-c---ac
i Lepilemur_ankaranensis.k141_596936                     C 0 I 122
s Lepilemur_dorsalis.k141_577674                             27756  64 +     45836 a--ag--aa----gg-a-----------g---------g-aat-----t-t--g-g--g-gg---t---------------a--aca-----------------------gaaa-----tgtt---cta---tctc------------ttggttg-------t---g------------gtg---------------------------atagttaag-c---ac
i Lepilemur_dorsalis.k141_577674                         C 0 I 122
s Lepilemur_ruficaudatus.k141_121139                           281  64 +     25010 a--gg--ca----gg-a-----------g---------g-aat-----t-t--g-g--a-gg---t---------------a--aca-----------------------gaaa-----tgtt---ctc---tctc------------ttggttg-------t---g------------gtg---------------------------atagttaag-c---ac
i Lepilemur_ruficaudatus.k141_121139                     C 0 I 69
s Lepilemur_septentrionalis.k141_185316                      25692  64 +     54090 a--ag--aa----gg-a-----------g---------g-aat-----t-t--g-g--g-gg---t---------------a--aca-----------------------gaaa-----tgtt---cta---tctc------------ttggttg-------t---g------------gtg---------------------------atagttaag-c---ac
i Lepilemur_septentrionalis.k141_185316                  C 0 I 122
s Leptonychotes_weddellii.KB714746.1                       3041985  50 +   3914936 -----------------------------------------------------t-tg-g-ga---t---------------g--atg-----------------------gaaa-----tgtt---tgg---tatc------------ttgatta-------t---g------------gca---------------------------gtggttaag-t---ac
i Leptonychotes_weddellii.KB714746.1                     I 16 I 55
s Lepus_americanus.LepAme_scaffold_107385                     4642  72 -     14121 a--gg--ca----tg-g-----------g---------a-aatgagggt-g-ag-g--ggagt--t---------------a--acg-----------------------gaaa-----tgtt---ccc---tatc------------ttgattg-------t---g------------gct---------------------------gtaggtaat-t---at
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 50
s Lophocebus_aterrimus.ctg367                              1435205  63 +   1826925 a--gg--ca----gg-g-----------a---------g-aa------g-t--g-g--g-gg---t---------------g--acg-----------------------ggca-----catt---ctg---catc------------atgattg-------c---g------------gcg---------------------------atcgtGAAG-T---AC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                            4216089  67 -  43346337 g--ggcaca----aggc-----------a---------a-cat-----t-t-tg-g--g-at---g---------------a--atg-----------------------a-aa-----tgtt---cta---tatc------------ttgcttg-------t---g------------ctg---------------------------gtggttaac-c---at
i Loxodonta_africana.GL010049.1                          C 0 I 234
s Lycaon_pictus.CM007581.1                                17954263  50 -  59628241 -----------------------------------------------------t-ag-g-gg---t---------------g--atg-----------------------gaaa-----agtt---cta---tatc------------ttgatga-------t---g------------gca---------------------------gtagttaag-t---at
i Lycaon_pictus.CM007581.1                               I 16 I 55
s Macaca_arctoides.k141_2326796                               5020  63 +     40492 a--gg--ca----gg-g-----------a---------g-aa------g-c--g-g--g-gg---t---------------g--acc-----------------------ggca-----catt---ctg---catc------------atgattg-------c---g------------gcg---------------------------atcgtGAAG-T---AC
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59674282  63 +  60120075 a--gg--ca----gg-g-----------a---------g-aa------g-c--g-g--g-gg---t---------------g--acc-----------------------ggca-----catt---ctg---catc------------atgattg-------c---g------------gcg---------------------------atcgtGAAG-T---AC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 10776  63 -     26193 a--gg--ca----gg-g-----------a---------g-aa------g-t--g-t--g-gg---t---------------g--acg-----------------------ggca-----catt---cta---catc------------atgattg-------c---g------------gcg---------------------------atcgtGAAG-T---AC
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            78580  63 -    114318 a--gg--ca----gg-g-----------a---------g-aa------g-c--g-g--g-gg---t---------------g--acc-----------------------ggca-----catt---ctg---catc------------atgattg-------c---g------------gcg---------------------------atcgtGAAG-T---AC
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  4279  63 -     23192 a--gg--ca----gg-g-----------a---------g-aa------g-t--g-g--g-gg---t---------------g--acc-----------------------ggca-----catt---ctg---catc------------atgattg-------c---g------------gcg---------------------------atcgtGAAG-T---AC
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                13740  63 -     29190 a--gg--ca----gg-g-----------a---------g-aa------g-t--g-g--g-gg---t---------------g--acc-----------------------ggca-----cagt---ctg---catc------------atgattg-------c---g------------gcg---------------------------atcgtGAAG-T---AC
i Macaca_leonina.k141_3550399                            C 0 I 94
s Macaca_maura.k141_2733130                                  22306  63 +     37952 a--gg--ca----gg-g-----------a---------g-aa------g-t--g-g--g-gg---t---------------g--acc-----------------------ggta-----catt---ctg---catc------------atgattg-------c---g------------gcg---------------------------atcgtgaag-c---ac
i Macaca_maura.k141_2733130                              C 0 I 94
s Macaca_mulatta.NC_041758.1                             186837395  63 + 187317192 A--GG--CA----GG-G-----------A---------G-AA------G-C--G-G--G-GG---T---------------G--ACC-----------------------GGCA-----CATT---CTG---CATC------------ATGATTG-------C---G------------GCG---------------------------ATCGTGAAG-T---AC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25455957  63 -  25927173 A--GG--CA----GG-G-----------A---------G-AA------G-T--G-G--G-GG---T---------------G--ACC-----------------------GGCA-----CAGT---CTG---CATC------------ATGATTG-------C---G------------GCG---------------------------ATCGTGAAG-T---AC
i Macaca_nemestrina.KQ007038.1                           C 0 I 94
s Macaca_nigra.k141_1655396                                  78156  63 +     89720 a--gg--ca----gg-g-----------a---------g-aa------g-t--g-g--g-gg---t---------------g--acc-----------------------ggca-----cagt---ctg---catc------------atgattg-------c---g------------gcg---------------------------atcgtgaag-c---ac
i Macaca_nigra.k141_1655396                              C 0 I 94
s Macaca_radiata.k141_3680011                                 5153  63 +     20474 a--gg--ca----gg-g-----------a---------g-aa------g-c--g-g--g-gg---t---------------g--acc-----------------------ggca-----catt---ctg---catc------------atgattg-------c---g------------gcg---------------------------atcgtGAAG-T---AC
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   4954  63 -     14993 a--gg--ca----gg-g-----------a---------g-aa------g-t--g-g--g-gg---t---------------g--acc-----------------------ggca-----cagt---ctg---catc------------atgattg-------c---g------------gcg---------------------------atcgtgaag-c---ac
i Macaca_siberu.k141_635500                              C 0 I 94
s Macaca_silenus.Contig273                                  327825  63 -    668171 a--gg--ca----gg-g-----------a---------g-aa------g-t--g-g--g-gg---t---------------g--acc-----------------------ggca-----cagt---ctg---catc------------atgattg-------c---g------------gcg---------------------------atcgtgaag-c---ac
i Macaca_silenus.Contig273                               C 0 I 94
s Macaca_thibetana.k99_256239                                 3265  63 -     24072 a--gg--ca----gg-g-----------a---------g-aa------g-c--g-g--g-gg---t---------------g--acc-----------------------ggca-----catt---ctg---catc------------atgattg-------c---g------------gcg---------------------------atcgtGAAG-T---AC
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               23894  63 -     45290 a--gg--ca----gg-g-----------a---------g-aa------g-t--g-g--g-gg---t---------------g--acc-----------------------ggta-----catt---ctg---catc------------atgattg-------c---g------------gcg---------------------------atcgtGAAG-T---AC
i Macaca_tonkeana.k141_1498238                           C 0 I 94
s Macroglossus_sobrinus.MacSob_scaffold_8222                 89732  67 +     94391 a--ga--ca----caag-----------g---------g-aa--a---t-t-tt-g-ag-gg---t---------------g--ata-----------------------aaaa-----tgta---cta---tatg------------ttgattg-------t---g------------gtg---------------------------atggtgaag-t---aa
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 48
s Mandrillus_leucophaeus.scaffold280                      23935478  63 -  24302211 a--gg--ca----gg-g-----------a---------g-aa------g-t--g-g--g-gg---t---------------g--acg-----------------------ggca-----catt---ctg---catc------------atgattg-------c---g------------gcg---------------------------atcgtGAAG-T---AC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               349610  63 +    752769 a--gg--ca----gg-g-----------a---------g-aa------g-t--g-g--g-gg---t---------------g--acg-----------------------ggca-----catt---ctg---catc------------atgattg-------c---g------------gcg---------------------------atcgtGAAG-T---AC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33100919  49 -  40650429 -------------------------------------------------------g--g-ag--ct---------------a--ata-----------------------aaaa-----tgtt---cca---tatc------------ttgattg-------t---g------------gta---------------------------gtagttaaa-c---ac
i Marmota_marmota.CZRN01000018.1                         I 16 I 66
s Megaderma_lyra.MegLyr_scaffold_4542                         9453  66 -    207569 a--gg--ca----ca-g-----------g---------a-aa--a---t-g-tg-gg-a-gg---t---------------g--atg-----------------------gaaa-----ggta---ctg---tatc------------ttgattc-------t---g------------gca---------------------------gtggtgaag-g---at
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 4280
s Mellivora_capensis.MelCap_flattened_line_69365              9166  50 +     13704 -----------------------------------------------------t-g-ag-gg---t---------------g--atg-----------------------gaaa-----tgtt---cag---tatc------------ttgatta-------c---a------------aca---------------------------gtggttaag-t---ac
i Mellivora_capensis.MelCap_flattened_line_69365         I 17 I 54
s Meriones_unguiculatus.MerUng_scaffold_7390                 31449  28 +    140813 a--gg--aa----gg-gagacctcag--a---------a-att-----tag-aa-g-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             I 672 I 495
s Mico_argentatus.k141_1239457                                3940  52 -      7380 --------------------------------------------------t--t-g--g-gg---t---------------g--agg-----------------------gaca-----catt---ctg---cgtc------------atgattg-------c---g------------gtg---------------------------atCATGAAG-TATGA-
i Mico_argentatus.k141_1239457                           I 12 C 0
s Mico_humeralifer.k141_1976199                               3013  52 +     18990 --------------------------------------------------t--t-g--g-gg---t---------------g--agg-----------------------gaca-----catt---ctg---cgtc------------atgattg-------t---g------------gtg---------------------------atCATGAAG-TATGA-
i Mico_humeralifer.k141_1976199                          I 12 C 0
s Mico_schneideri.k141_1950671                                      3952  52 -      7356 --------------------------------------------------t--t-g--g-gg---t---------------g--agg-----------------------gaca-----catt---ctg---cgtc------------atgatcg-------c---g------------gtg---------------------------atCATGAAG-TATGA-
i Mico_schneideri.k141_1950671                                 I 12 C 0
s Mesocricetus_auratus.KB708134.1                         12180937  24 -  29670104 A--GA--AA----GA-GAGACCTCGA--G---------AAAT-----GT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Mesocricetus_auratus.KB708134.1                        I 391 I 469
s Microcebus_murinus.CM007674.1                           18290198  64 -  93316391 A--GG--CA----GG-A-----------G---------G-AA-----TT-T--G-A--G-GG---T---------------a--aca-----------------------gaaa-----tgtt---ctg---tatc------------ttggttG-------T---G------------GTG---------------------------GCAGTTAAG-C---AC
i Microcebus_murinus.CM007674.1                          C 0 I 71
s Micronycteris_hirsuta.MicHir_scaffold_52381                14517  42 -     19307 a--gg--ca----cgag-----------g---------a-aa-g----t-t-tg-g--g-gg---t---------------g--atg-----------------------aaaa-----tgtt---cta---tata-----------------------------------------------------------------------------------------
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 88
s Miniopterus_natalensis.LDJU01000034.1                    1849761  64 +   8254450 ----------------------------g---------g-aa--a---t-t-tg-gg-a-gg---t---------------g--atg-----------------------gaaa-----tgtc---ctc---tatc------------ttggttg-------tagtg------------gtg--------------------g----tggtggtgaag-c---at
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 55
s Miniopterus_schreibersii.MinSch_scaffold_18080             33438  64 +     64694 ----------------------------g---------g-aa--a---t-t-tg-gg-a-gg---t---------------g--atg-----------------------gaaa-----tgtc---ctc---tatc------------ttggttg-------tagtg------------gtg--------------------g----tggtggtgaag-c---at
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 55
s Miopithecus_ogouensis.k141_534055                           7202  63 -     28506 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--acg-----------------------ggca-----catt---ctg---catc------------atgattg-------c---g------------gtg---------------------------atcgtGAAG-T---AC
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         4853  50 -      8324 -----------------------------------------------------t-gg-g-ga---t---------------g--atg-----------------------gaaa-----tgtt---tgg---tatc------------ttgatta-------t---g------------gca---------------------------gtggttaag-t---ac
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 16 I 55
s Mirza_zaza.k141_952172                                      7751  64 -     37649 a--gg--ct----gg-a-----------g---------g-aat-----t-t--g-g--g-gg---t---------------a--aca-----------------------gaaa-----tgtt---cta---tagc------------ttggttg-------t---g------------gtg---------------------------gtagttaag-c---ac
i Mirza_zaza.k141_952172                                 C 0 I 70
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140435 105 -    366855 a--gg--ca----cagg-----------g---------a--a--a---t-t-tg-ag-g-gg---t---------------g--gtg-----------------------aaaa-----catt---ctg---tatcatgatggcggtggcggtGG-------C---G------------GTGGCGGTGGCGGTGGCGGTGGCgaccgtggtggtgaag-t---at
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 53
s Mungos_mungo.MunMun_flattened_line_23663                   34562  51 +     37127 -----------------------------------------------------g-ggag-gg---t---------------g--atg-----------------------gaaa-----tgct---ctg---tatc------------ttgatta-------t---g------------gtg---------------------------gtggttaag-t---ac
i Mungos_mungo.MunMun_flattened_line_23663               I 17 I 55
s Murina_feae.MurFea_scaffold_85699                           5624  69 +     14753 a--gg--ca----caag-----------g---------g-gg--a---c-t-tg-gg-g-gg---t---------------g--atg-----------------------ga-a-----tgtt---cta---tgtc------------ttggttg-------t---g------------gag---------------------a---tggtagtgaag-t---at
i Murina_feae.MurFea_scaffold_85699                      C 0 I 55
s Mus_caroli.LT608237.1                                   84359844  28 - 120012414 A--GG--AA----GG-GAGACCTCAG--A---------A-AT-----TTAA-AA-G-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Mus_caroli.LT608237.1                                  I 654 I 692
s Mus_musculus.chr8                                       87648829  28 - 129401213 A--GG--AA----GG-GAGAACTCAG--A---------A-AT-----TTAA-AA-G-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Mus_musculus.chr8                                      I 655 I 707
s Mus_pahari.LT608297.1                                   31353487  28 -  89631738 a--gg--aa----gg-gagacctcag--a---------a-att-----taa-aa-g-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Mus_pahari.LT608297.1                                  I 651 I 705
s Mus_spretus.CM004101.1                                  90750906  28 - 130317789 A--GG--AA----GG-GAGACCTCAG--A---------A-AT-----TTAA-TA-G-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Mus_spretus.CM004101.1                                 I 654 I 691
s Mustela_putorius.JH418006.1                               300343  50 -  14710649 -----------------------------------------------------t-g-ag-gg---t---------------g--atg-----------------------gaaa-----tgtt---cgg---tatc------------ttgatta-------c---a------------aca---------------------------gtggttaag-t---ac
i Mustela_putorius.JH418006.1                            I 17 I 55
s Myotis_brandtii.KE162005.1                                278796  69 -  10118263 a--gg--ca----caag-----------g---------g-gg--a---t-t-tg-gg-g-gg---t---------------g--atg-----------------------ga-a-----tgtt---cta---tgtc------------ttggttg-------t---g------------gag---------------------a---tggtggtgaag-t---at
i Myotis_brandtii.KE162005.1                             C 0 I 55
s Myotis_davidii.KB100139.1                                1586490  69 -   6019432 a--gg--ca----caag-----------g---------g-gg--a---t-t-tg-gg-a-ag---t---------------g--atg-----------------------ga-a-----tgtt---cta---tgcc------------tcggctg-------t---g------------gag---------------------a---tggtggtgaag-t---at
i Myotis_davidii.KB100139.1                              C 0 I 55
s Myotis_lucifugus.GL429869.1                              3902560  69 -   4330536 a--gg--ca----caag-----------g---------g-gg--a---t-t-tg-gg-g-gg---t---------------g--atg-----------------------ga-a-----tgtt---cta---tgtc------------ttggctg-------t---g------------gag---------------------a---tggtggtgaag-t---at
i Myotis_lucifugus.GL429869.1                            C 0 I 55
s Myotis_myotis.MyoMyo_scaffold_28916                        33115  70 +     33610 a--gg--ca----caag-----------g---------g-ga-g----t-t-tg-gggg-gg---t---------------g--atg-----------------------ga-a-----tgtt---ctg---tgtc------------ttggctg-------t---g------------gag---------------------a---tggtggtgaag-t---at
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 I 55
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187915  55 +    196477 ----------------------------g---------a-act----tt-t-gggg--g-gt---g---------------a--agg-----------------------a-aa-----tatt---at------tc------------ttgactg-------c---a------------gtg---------------------------gcggtgaac-a---ac
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 1 I 110
s Nannospalax_galili.KL204047.1                            2025214   1 -   3037898 --------------------------------------------------------------------------------------------------------------------------A------------------------------------------------------------------------------------------------------
i Nannospalax_galili.KL204047.1                          T 841 I 7823
s Nasalis_larvatus.k141_413338                               13197  63 +     21681 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--acg-----------------------ggca-----catt---ctg---catc------------atgattg-------c---a------------gcg---------------------------atcgtGAAG-T---AC
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306110  49 +  31847680 -----------------------------------------------------t-tg-g-ga---t---------------g--atg-----------------------aaaa-----tgtt---tgg---tatc------------ttgatta-------t---g------------gca---------------------------tt-gttaag-t---ac
i Neomonachus_schauinslandi.NINY01007730.1               I 15 I 54
s Nyctereutes_procyonoides.CAJHUB010000658.1               9148517  50 -   9404916 -----------------------------------------------------t-ag-g-gg---t---------------g--atg-----------------------gaaa-----agtt---cta---tatc------------ttgatga-------t---g------------gca---------------------------gtagttaag-t---ac
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 16 I 55
s Ochotona_princeps.JH802162.1                             1361722  68 +   3988456 a--gg--ca----tg-t-----------g---------a-aat-----t-g-aa-g--gtact--t---------------a--aca-----------------------gaaa-----tgtt---cca---taga------------ttgactg-------t---g------------gct---------------------------atggtttatgt---at
i Ochotona_princeps.JH802162.1                           C 0 I 98
s Odobenus_rosmarus.KB229312.1                              505791  50 -   2017862 -----------------------------------------------------t-tg-g-ga---t---------------g--atg-----------------------gaaa-----tgtt---tgg---tatc------------ttgatta-------t---g------------gca---------------------------gtggttaag-t---ac
i Odobenus_rosmarus.KB229312.1                           I 16 I 55
s Ondatra_zibethicus.OndZib_scaffold_46174                   23856  23 +     28053 A--GG--AA----GA-GAAACCTTGA--G---------A-AT-----GT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Ondatra_zibethicus.OndZib_scaffold_46174               I 1559 I 792
s Onychomys_torridus.OnyTor_scaffold_2986                    78842   8 +    102263 A--GG--AA----GA-G----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Onychomys_torridus.OnyTor_scaffold_2986                I 1442 I 497
s Oryctolagus_cuniculus.CM000791.1                        67145488  72 + 174332312 a--gg--ca----tg-g-----------g---------a-aatgagggt-g-ag-g--ggagt--t---------------a--atg-----------------------gaaa-----tgtt---ccc---tatc------------tggattg-------t---g------------gct---------------------------gtaggtaat-t---at
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 50
s Otocyon_megalotis.JAEUCK010005147.1                       461485  50 -    559221 -----------------------------------------------------t-ag-g-gg---t---------------g--atg-----------------------gaaa-----agtt---cta---tatc------------ttgatga-------t---g------------gca---------------------------gtagttaag-t---ac
i Otocyon_megalotis.JAEUCK010005147.1                    I 16 I 55
s Otolemur_crassicaudatus.k141_222918                         2355  65 +      8798 a--gt--ca----gg-a-----------g---------g-aat-----t-t--g-g--g-gc---t--------------ta--gga-----------------------gaaa-----tgct---ctc---gatc------------ttggttg-------t---g------------ggg---------------------------gaggttaag-c---ac
i Otolemur_crassicaudatus.k141_222918                    C 0 I 145
s Otolemur_garnettii.GL873799.1                             694520  65 -   1103335 A--GT--CA----GG-A-----------G---------G-AA-----TT-T--G-G--G-GC---T--T------------A--GGA-----------------------GAAA-----TGCT---CTC---TATC------------TTAGTTG-------T---G------------GGG---------------------------GAGGTTAAG-C---AC
i Otolemur_garnettii.GL873799.1                          C 0 I 145
s Pan_paniscus.KQ411613.1                                    42139  63 +     80009 A--GG--CA----GG-G-----------A---------A-AA------T-T--G-G--G-GG---T---------------G--ACG-----------------------GACA-----CATT---CTG---CATC------------ATGATTG-------C---G------------GCG---------------------------ATCGTGAAG-T---AC
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03001836.1                             28064  63 +     51860 A--GG--CA----GG-G-----------A---------A-AA------T-T--G-G--G-GG---T---------------G--ACG-----------------------GACA-----CATT---CTG---CATC------------ATGATTG-------T---G------------GCG---------------------------ATCGTGAAG-T---AC
i Pan_troglodytes.NBAG03001836.1                         I 24 I 362
s Panthera_onca.PanOnc_flattened_line_3271                  150315  50 +    230217 -----------------------------------------------------t-gg-g-gg---t---------------g--atg-----------------------gaaa-----tgtt---cta---tgtc------------ttgatta-------t---g------------gtg---------------------------gtggttaag-a---at
i Panthera_onca.PanOnc_flattened_line_3271               I 17 I 55
s Panthera_pardus.KV860321.1                                263520  50 +  18783137 -----------------------------------------------------t-gg-g-gg---t---------------g--atg-----------------------gaaa-----tgtt---cta---tgtc------------ttgatta-------t---g------------gtg---------------------------gtggttaag-a---at
i Panthera_pardus.KV860321.1                             I 17 I 55
s Panthera_tigris.KE722367.1                               4720158  50 -   8748460 -----------------------------------------------------t-gg-g-gg---t---------------g--atg-----------------------gaaa-----tgtt---cta---tgtc------------ttgatta-------t---g------------gtg---------------------------gtggttaag-a---at
i Panthera_tigris.KE722367.1                             I 17 I 55
s Papio_anubis.CM001495.2                                183441232  63 + 183742232 A--GG--CA----GG-G-----------A---------G-AA------G-T--G-G--G-GG---T---------------G--ACG-----------------------GGCA-----CATT---CTG---CATC------------ATGATTG-------C---G------------GCA---------------------------ATCGTGAAG-T---AC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             4926  63 +     20448 a--gg--ca----gg-g-----------a---------g-aa------g-t--g-g--g-gg---t---------------g--acg-----------------------ggca-----catt---ctg---catc------------atgattg-------c---g------------gCA---------------------------ATCGTGAAG-T---AC
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20561734  63 +  20919399 a--gg--ca----gg-g-----------a---------g-aa------g-t--g-g--g-gg---t---------------g--acg-----------------------ggca-----catt---ctg---catc------------atgattg-------c---g------------gCA---------------------------ATCGTGAAG-T---AC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   3670  63 +     41871 a--gg--ca----gg-g-----------a---------g-aa------g-t--g-g--g-gg---t---------------g--acg-----------------------ggca-----catt---ctg---catc------------atgattg-------c---g------------gCA---------------------------ATCGTGAAG-T---AC
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     6955  63 +     27711 a--gg--ca----gg-g-----------a---------g-aa------g-t--g-g--g-gg---t---------------g--acg-----------------------ggca-----catt---ctg---catc------------atgattg-------c---g------------gCA---------------------------ATCGTGAAG-T---AC
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  7035  63 +      9205 a--gg--ca----gg-g-----------a---------g-aa------g-t--g-g--g-gg---t---------------g--acg-----------------------ggca-----catt---ctg---catc------------atgattg-------c---g------------gcg---------------------------atcgtGAAG-T---AC
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11778  50 -     78924 -----------------------------------------------------g-gg-g-gg---t---------------g--aca-----------------------gaaa-----tgtt---ctt---tatc------------ttgatta-------t---g------------gtg---------------------------gtggttaag-t---ac
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 17 I 55
s Perodicticus_ibeanus.k141_855320                            8500  65 +     13100 a--gt--ca----gg-a-----------g---------g-aat-----t-t--a-g--g-gg---t--------------ta--gga-----------------------gaaa-----tgct---ctg---tacc------------ttggttg-------t---g------------ggg---------------------------gtggttaag-c---at
i Perodicticus_ibeanus.k141_855320                       C 0 I 149
s Perodicticus_potto.k141_1092580                             6902  65 +     25941 a--gt--ca----gg-a-----------g---------g-aat-----t-t--a-g--g-gg---t--------------ta--gga-----------------------gaaa-----tgct---ctg---tacc------------ttggttg-------t---g------------ggg---------------------------gtggttaag-c---at
i Perodicticus_potto.k141_1092580                        C 0 I 149
s Peromyscus_maniculatus.KI615324.1                       18193446  23 -  18517816 A--GG--AA----GA-GAAACCTTGG--G---------A-AT-----GT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Peromyscus_maniculatus.KI615324.1                      I 1443 I 497
s Piliocolobus_badius.k141_1234363                           41694  63 +     62158 a--gg--ga----gg-g-----------a---------g-aa------c-t--g-g--g-gg---t---------------g--acg-----------------------ggca-----catt---ctg---catc------------atgattg-------c---g------------gcg---------------------------atcgtGAAG-T---AC
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        36425  63 +     89929 a--gg--ga----gg-g-----------a---------g-aa------c-t--g-g--g-gg---t---------------g--acg-----------------------ggca-----catt---ctg---catc------------atgattg-------c---g------------gcg---------------------------atcgtGAAG-T---AC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            37841  63 +     51399 a--gg--ga----gg-g-----------a---------g-aa------c-t--g-g--g-gg---t---------------g--acg-----------------------ggca-----catt---ctg---catc------------atgattg-------c---g------------gcg---------------------------atcgtGAAG-T---AC
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14294079  63 -  14605196 A--GG--GA----GG-G-----------A---------G-AA------C-T--G-G--G-GG---T---------------G--ACG-----------------------GGCA-----CATT---CTG---CATC------------ATGATTG-------C---G------------GCG---------------------------ATCGTGAAG-T---AC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187              927  93 +     22620 a--ga--ca----caag-----------g---------g-ag--a---t-t-tg-gg-g-ga---t---------------g--gtgggatggtggggtggggggagataaaaa-----tgtt---cta---tgtc------------taggttg-------t---g------------gag---------------------a---tggtggtgaag-t---at
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 56
s Pongo_abelii.CM009266.2                                189129173  70 + 189387572 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-GG---T---------------G--ACA-----------------------GACA-----CATT---CTG---CATC------------ATGATTGTGTGAATC---A------------GCA---------------------------ATTGTGAAG-T---AT
i Pongo_abelii.CM009266.2                                T 24608 I 24608
s Pongo_pygmaeus.ctg66                                     9568781  70 +   9816681 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--aca-----------------------gaca-----catt---ctg---catc------------atgattgtgTGAATC---A------------GCA---------------------------ATTGTGAAG-T---AT
i Pongo_pygmaeus.ctg66                                   I 5 C 0
s Presbytis_comata.k141_677006                               71365  63 -     81375 g--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--acg-----------------------ggca-----catt---ctg---catc------------gtgattg-------c---a------------gcg---------------------------atcgtGAAG-T---AC
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              3185  63 +     19060 g--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--acg-----------------------ggca-----catt---ctg---catc------------gtgattg-------c---a------------gcg---------------------------atcgtGAAG-T---AC
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 11924  67 -     22811 g--ggtgca----aggc-----------a---------a-agt-----t-t-tg-a--g-gt---g---------------a--atg-----------------------a-aa-----tatc---cta---ggta------------ttgattg-------t---g------------ttg---------------------------gtgattaac-t---at
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 I 249
s Prolemur_simus.MPIZ01000396.1                            2595460  64 -   4620579 A--GG--CA----GG-A-----------G---------G-AA-----TT-T--G-G--G-GG---t---------------a--aca-----------------------gaaa-----tgtt---cta---tatc------------ttggttG-------T---G------------GTG---------------------------GTAGTTAAG-C---AC
i Prolemur_simus.MPIZ01000396.1                          C 0 I 70
s Propithecus_coquerelli.NW_012148875.1                     989444  64 +   2598838 A--GA--CA----GG-A-----------G---------G-AA-----TT-T--G-G--A-GG---T---------------A--aga-----------------------gaaa-----tgtt---ctg---tatc------------ttcgTTG-------T---G------------CTG---------------------------GTAGTTAAG-C---AC
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 70
s Propithecus_coronatus.k141_347390                          27754  64 +     38485 a--ga--ca----gg-a-----------g---------g-aat-----t-t--g-g--a-gg---t---------------a--aga-----------------------gaaa-----tgtt---ctg---tatc------------ttcgttg-------t---g------------ctg---------------------------gtagttaag-c---ac
i Propithecus_coronatus.k141_347390                      C 0 I 70
s Propithecus_diadema.k141_357118                             3914  64 +      4256 a--ga--ca----gg-a-----------g---------g-aat-----t-t--g-g--a-gg---t---------------a--aga-----------------------gaaa-----tgtt---ctg---tatc------------tttgttg-------t---g------------ctg---------------------------gtagttaag-c---ac
i Propithecus_diadema.k141_357118                        C 0 I 70
s Propithecus_edwardsi.k141_1176054                          25267  64 +     35766 a--ga--ca----gg-a-----------g---------g-aat-----t-t--g-g--a-gg---t---------------a--aga-----------------------gaaa-----tgtt---ctg---tatc------------tttgttg-------t---g------------ctg---------------------------gtagttaag-c---ac
i Propithecus_edwardsi.k141_1176054                      C 0 I 70
s Propithecus_perrieri.k141_1200571                           3449  64 -     24134 a--ga--ca----gg-a-----------g---------g-aat-----t-t--g-g--a-gg---t---------------a--aga-----------------------gaaa-----tgtt---ctg---tatc------------tttgttg-------t---g------------ctg---------------------------gtagttaag-c---ac
i Propithecus_perrieri.k141_1200571                      C 0 I 70
s Propithecus_tattersalli.k141_790011                        27271  64 -     67325 a--ga--ca----gg-a-----------g---------g-aat-----t-t--g-g--a-gg---t---------------a--aga-----------------------gaaa-----tgtt---ctg---tatc------------ttcgttg-------t---g------------ctg---------------------------gtagttaag-c---ac
i Propithecus_tattersalli.k141_790011                    C 0 I 70
s Propithecus_verreauxi.k141_956661                           3507  64 -      6182 a--ga--ca----gg-a-----------g---------g-aat-----t-t--g-g--a-gg---t---------------a--aga-----------------------gaaa-----tgtt---ctg---tatc------------ttcgttg-------t---g------------ctg---------------------------gtagttaag-c---ac
i Propithecus_verreauxi.k141_956661                      C 0 I 70
s Psammomys_obesus.NESX01036370.1                             9079  28 -     21651 a--gg--aa----gg-gagacctcag--a---------a-att-----tag-aa-g-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Psammomys_obesus.NESX01036370.1                        I 660 I 499
s Pteronotus_parnellii.KE909381.1                            13813  42 -     21811 a--gg--ca----cggg-----------a---------a--a--a---t-t-tg-gg-a-gg---t---------------g--atg-----------------------aaaa-----cgtg---ccg---tatc-----------------------------------------------------------------------------------------
i Pteronotus_parnellii.KE909381.1                        C 0 I 81
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39365  50 +     42204 -----------------------------------------------------t-g-ag-gg---t---------------g--atg-----------------------gaaa-----tgtt---agg---tatg------------ttgatta-------c---a------------ata---------------------------gtggttaag-g---ac
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 17 I 55
s Pteropus_alecto.KB030862.1                              22975896  67 +  28871421 a--gg--ca----caag-----------g---------g-aa--a---t-t-tt-g-ag-gg---t---------------g--ata-----------------------aaaa-----tgta---cta---catc------------ttgattg-------t---g------------gtg---------------------------atggtgaag-t---aa
i Pteropus_alecto.KB030862.1                             C 0 I 55
s Pteropus_vampyrus.KN525825.1                             1358982  67 +   4952924 a--gg--ca----caag-----------g---------g-aa--a---t-t-tt-g-ag-gg---t---------------g--ata-----------------------aaaa-----tgta---cta---tatc------------ttgattg-------t---g------------gtg---------------------------atggtgaag-t---aa
i Pteropus_vampyrus.KN525825.1                           C 0 I 55
s Puma_concolor.QAVW01001104.1                            20273434  53 -  38429054 -----------------------------------------------------t-gg-g-ggtgat---------------g--atg-----------------------gaaa-----tgtt---cca---tatc------------ttgatta-------t---g------------gtg---------------------------gtggttaag-a---at
i Puma_concolor.QAVW01001104.1                           I 17 I 55
s Pygathrix_cinerea.k141_1153803                             13196  63 -     91421 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--aca-----------------------ggca-----catt---ctg---catc------------atgattg-------c---a------------gcg---------------------------atCATGAAG-T---AC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7607322  63 +   7812017 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--acg-----------------------ggca-----catt---ctg---catc------------atgattg-------c---a------------gcg---------------------------atCATGAAG-T---AC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             13170  63 -     72585 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--acg-----------------------ggca-----catt---ctg---catc------------atgattg-------c---a------------gcg---------------------------atCATGAAG-T---AC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53568903  28 +  90668790 a--gg--ga----gg-gagacctcag--a---------a-att-----taa-ag-g-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Rattus_norvegicus.chr16                                I 646 I 910
s Rhinopithecus_bieti.k119_217274                             4877  63 -     11128 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--acg-----------------------ggca-----catt---ctg---catc------------atgattg-------c---a------------gcg---------------------------atcgtGAAG-T---AC
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91234233  63 - 195417433 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-GG---T---------------G--ACG-----------------------GGCA-----CATT---CTG---CATC------------ATGATTG-------C---A------------GCG---------------------------ATCGTGAAG-C---AC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7669882  63 +   7961872 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--acg-----------------------ggca-----catt---ctg---catc------------atgattg-------c---a------------gcg---------------------------atcgtGAAG-T---AC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                86914  67 -     96226 a--gg--ca----caag-----------g---------g-aa--a---t-t-tt-g-ag-gg---t---------------g--ata-----------------------aaaa-----tgtg---cta---tatc------------ttgattg-------t---g------------gtg---------------------------atggtgaat-a---ca
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 55
s Saguinus_bicolor.k141_2619299                               6422  52 -      8359 --------------------------------------------------T--T-G--G-GG---T---------------G--GGG-----------------------GACA-----CATT---CTG---CGTC------------ATGATCG-------C---G------------GTG---------------------------ATCGTGAAG-TATGA-
i Saguinus_bicolor.k141_2619299                          I 12 I 22
s Saguinus_imperator.k141_2524406                              363  52 +      2197 --------------------------------------------------T--T-G--G-AG---T---------------G--AGG-----------------------GACA-----CATT---CTG---CATC------------ATGATCG-------C---G------------GTG---------------------------ATTGTGAAG-TATGA-
i Saguinus_imperator.k141_2524406                        I 12 I 22
s Saguinus_inustus.k141_699149                               11785  52 +     13640 --------------------------------------------------T--T-G--G-GG---T---------------G--AGG-----------------------GACA-----CATT---CTG---CATC------------ATGATCG-------C---G------------GTG---------------------------ATCGTGAAG-TATGA-
i Saguinus_inustus.k141_699149                           I 12 I 22
s Saguinus_labiatus.k141_285685                               6647  52 +      8564 --------------------------------------------------T--T-G--G-GG---T---------------G--AGG-----------------------GACA-----CATT---CTG---CGTC------------ATGATCG-------C---G------------GTG---------------------------ATCGTGAAG-TATGA-
i Saguinus_labiatus.k141_285685                          I 12 I 22
s Saguinus_midas.LG03                                    209467497  52 + 209938924 --------------------------------------------------T--T-G--G-GG---T---------------G--GGG-----------------------GACA-----CATT---CTG---CGTC------------ATGATCG-------C---G------------GTG---------------------------ATCGTGAAG-TATGA-
i Saguinus_midas.LG03                                    I 12 I 22
s Saguinus_mystax.k141_374627                                 6211  52 -      9399 --------------------------------------------------t--t-g--g-gt---t---------------g--agg-----------------------gaca-----catt---ctg---catc------------atgatcg-------c---g------------gtg---------------------------attgtGAAG-TATGA-
i Saguinus_mystax.k141_374627                            I 12 I 22
s Saimiri_boliviensis.NW_024100920.1                     119949410  65 - 121099817 a--gg--tc----ag-g-----------a---------g-aa------c-t--G-G--G-GG---T---------------G--AGG-----------------------GACA-----CATT---CTG---CATC------------ATGATCA-------C---G------------GCG---------------------------ATCGTGAAG-TATGA-
i Saimiri_boliviensis.NW_024100920.1                     C 0 I 81
s Saimiri_cassiquiarensis.k141_2188234                       21866  65 +     46362 a--gg--tc----ag-g-----------a---------g-aa------c-t--g-g--g-gg---t---------------g--agg-----------------------gaca-----catt---ctg---catc------------atgatca-------c---a------------gtg---------------------------atcgtGAAG-TATGA-
i Saimiri_cassiquiarensis.k141_2188234                   C 0 I 81
s Saimiri_macrodon.k141_716185                               21961  65 +     45824 a--gg--tc----ag-g-----------a---------g-aa------c-t--g-g--c-gg---t---------------g--agg-----------------------gaca-----catt---ctg---catc------------atgatca-------c---g------------gtg---------------------------atcgtGAAG-TATGA-
i Saimiri_macrodon.k141_716185                           C 0 I 81
s Saimiri_oerstedii.k141_1487881                             38589  65 -     64574 a--gg--tc----ag-g-----------a---------g-aa------c-t--g-g--c-gg---t---------------g--agg-----------------------gaca-----catt---ctg---catc------------atgatca-------c---g------------gcg---------------------------atcgtGAAG-TATGA-
i Saimiri_oerstedii.k141_1487881                         C 0 I 81
s Saimiri_sciureus.k141_2278166                               1595  65 -     23631 a--gg--tc----ag-g-----------a---------g-aa------c-t--g-g--c-gg---t---------------g--agg-----------------------gaca-----catt---ctg---catc------------atgatca-------c---g------------gcg---------------------------atcgtGAAG-TATGA-
i Saimiri_sciureus.k141_2278166                          C 0 I 81
s Saimiri_ustus.k141_1484609                                 21854  65 -     61129 a--gg--tc----ag-g-----------a---------g-aa------c-t--g-g--g-gg---t---------------g--agg-----------------------gaca-----catt---ctg---catc------------atgatca-------c---a------------gtg---------------------------atcgtGAAG-TATGA-
i Saimiri_ustus.k141_1484609                             C 0 I 81
s Semnopithecus_entellus.k141_11662                          17702  63 -     19888 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--aca-----------------------ggca-----catt---ctg---catc------------atgattg-------c---a------------gcg---------------------------atcgtGAAG-T---AC
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      24905  63 +     39453 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--aca-----------------------ggca-----catt---ctg---catc------------atgattg-------c---a------------gcg---------------------------atcgtGAAG-T---AC
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            5424  63 +     27826 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--aca-----------------------ggca-----catt---ctg---catc------------atgattg-------c---a------------gcg---------------------------atcgtGAAG-T---AC
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             4944  63 -     19483 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--aca-----------------------ggca-----catt---ctg---catc------------atgattg-------c---a------------gcg---------------------------atcgtGAAG-T---AC
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      5013  63 +      7198 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--aca-----------------------ggca-----catt---ctg---catc------------atgattg-------c---a------------gcg---------------------------atcgtGAAG-T---AC
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         13266  63 +     15514 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--aca-----------------------ggca-----catt---ctg---catc------------atgattg-------c---a------------gcg---------------------------atcgtGAAG-T---AC
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               2881  66 +   1910179 a--gg--ta----tgag-----------g---------g-aa--a---t-t-ta-g--g-gg---t---------------a--atg-----------------------aaaa-----tgtt---ttg---tatc------------ttgactg-------t---g------------gca---------------------------atggttagg-t---ac
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 55
s Sorex_araneus.JH798187.1                                13649786  66 -  18376816 -----------------------------------------a--a---c-t-gg-g--g-at---agggaaaaataaaaaca--aca-----------------------taaaattataatt---tt----tatc------------ttga-tt-------t---g------------gta---------------------------gtcatt----------
i Sorex_araneus.JH798187.1                               I 10 I 60
s Spermophilus_dauricus.KZ294078.1                         1951808  49 -   3870691 -------------------------------------------------------g--g-ag--ct---------------a--ata-----------------------aaaa-----ggtt---cca---tatc------------ttgattg-------t---g------------gta---------------------------gtagttaaa-c---tc
i Spermophilus_dauricus.KZ294078.1                       I 16 I 66
s Spilogale_gracilis.SpiGra_flattened_line_13525             29866  50 +     97271 -----------------------------------------------------t-gg-g-gg---t---------------g--atg-----------------------gata-----tgtt---tgg---tatc------------ttgatta-------t---g------------gca---------------------------gtggttaag-t---ac
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 16 I 55
s Suricata_suricatta.SurSur_flattened_line_6629              17451  51 -    196729 -----------------------------------------------------a-ggag-ga---t---------------g--atg-----------------------gaaa-----ctct---ctc---tatc------------tagatta-------t---g------------gtg---------------------------gcggttaag-t---tc
i Suricata_suricatta.SurSur_flattened_line_6629          I 17 I 55
s Sus_scrofa.CM000828.4                                    6809631  32 +  69701581 --------------------------------------g-aa--a---g-t-ta-gg-g-gg---t---------------a--atg-----------------------gaaa-----tcta---ctg---tac------------------------------------------------------------------------------------------
i Sus_scrofa.CM000828.4                                  C 0 I 77
s Symphalangus_syndactylus.tarseq_199                      1091492  63 -   1523678 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--aca-----------------------gaca-----catt---ctg---catc------------atgattg-------c---a------------gca---------------------------attgtgacg-t---ac
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 9751  28 +     41958 ------------------------------------------------------------gg---t---------------g--ata-----------------------gaag-----tatt---cta---catc------------ttggtt-----------------------------------------------------------------------
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 20 I 70
s Tamandua_tetradactyla.TamTet_scaffold_1782                 71271  54 +    116680 ----------------------------g---------a-act----tt-t-gg-g--a-gt---g---------------a--agg-----------------------a-aa-----tatt---at------tc------------ttgccta-------t---a------------gtg---------------------------gtggtaaac-t---at
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 1 I 110
s Tapirus_indicus.TapInd_scaffold_9301                      117883  67 -    156842 a--gg--ca----caat-----------g---------g-aa--a---t-t-tg-gg-g-gg---t---------------g--atg-----------------------ggaa-----tgtt---ct--tt-gtc------------ttgattg-------t---g------------atg---------------------------gtggttgta-c---at
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 55
s Tapirus_terrestris.TapTer_scaffold_755                    386336  67 +    539355 a--gg--ca----caat-----------g---------g-aa--a---t-t-tg-gg-g-gg---t---------------g--atg-----------------------ggaa-----tgtt---ct--tt-gtc------------ttgattg-------t---g------------atg---------------------------gtggttgta-c---at
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 55
s Tarsius_lariang.k141_2201908                               24795  69 +     70052 agtgg--cg----gg-g-----------ag-----gg-g-ag------t-c-tg-g--g-gg---c---------------a--aga-----------------------gaaa-----tgtt---ctg---tatc------------ttgattg-------t---g------------gtg---------------------------gtagctaag-t---ac
i Tarsius_lariang.k141_2201908                           C 0 I 70
s Tarsius_wallacei.k141_2029956                               4135  69 +      4644 agtgg--cg----gg-g-----------ag-----gg-g-ag------t-c-tg-g--g-gg---c---------------a--aga-----------------------gaaa-----tgtt---ctg---tatc------------ttgattg-------t---g------------gtg---------------------------gtagctaag-t---ac
i Tarsius_wallacei.k141_2029956                          C 0 I 146
s Theropithecus_gelada.CM009954.1                        186426598  63 + 186847797 A--GG--CA----GG-G-----------A---------G-AA------G-T--G-G--G-GG---T---------------G--ACG-----------------------GGCA-----CATT---CTG---CATC------------ATGATTG-------C---G------------GCG---------------------------ATCGTGAAG-T---AC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   3759   2 +      8208 ------------------------------------------------------------------------------------------------------------------------------Ct-------------------------------------------------------------------------------------------------
i Tolypeutes_matacus.TolMat_scaffold_228639              I 9 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     80058  43 +    610378 a--gg--ca----cgag-----------g---------a-aa--a---t-t-tg-gg-g-gg---t---------------g--gtg-----------------------acaa-----tgtt---cta---tata-----------------------------------------------------------------------------------------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 76
s Trachypithecus_auratus.k141_722599                          8996  63 -     20410 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--aca-----------------------ggca-----catt---ctg---catc------------atgactg-------c---a------------gcg---------------------------atcgtGAAG-T---AC
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    13193  63 +     15221 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--aca-----------------------ggca-----catt---ctg---catc------------atgattg-------c---a------------gcg---------------------------atcgtGAAG-T---AC
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        9097  63 +     19930 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--aca-----------------------ggca-----catt---ctg---catc------------atgactg-------c---a------------gcg---------------------------atcgtGAAG-T---AC
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       5525  63 -     19997 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--aca-----------------------ggca-----catt---ctg---catc------------atgactg-------c---a------------gcg---------------------------atcgtGAAG-T---AC
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            45655  63 -     60166 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--aca-----------------------ggcg-----catt---ctg---catc------------atgattg-------c---a------------gcg---------------------------atcgtGAAG-T---AC
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        13119  63 -     27529 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--aca-----------------------ggca-----catt---ctg---catc------------atgactg-------c---a------------gcg---------------------------atcgtGAAG-T---AC
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     13063  63 -     18194 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--aca-----------------------ggca-----catt---ctg---catc------------atgactg-------c---a------------gcg---------------------------atcgtGAAG-T---AC
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           6792  63 -     21137 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--aca-----------------------ggca-----catt---ctg---catc------------atgactg-------c---a------------gcg---------------------------atcgtGAAG-T---AC
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    5495  63 -     10723 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--aca-----------------------ggca-----catt---ctg---catc------------atgactg-------c---a------------gcg---------------------------atcgtGAAG-T---AC
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         4651  63 +      9834 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--aca-----------------------ggca-----catt---ctg---catc------------atgattg-------c---a------------gcg---------------------------atcgtGAAG-T---AC
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        22964  63 +     32220 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--aca-----------------------ggca-----catt---ctg---catc------------atgattg-------c---a------------gcg---------------------------atcgtGAAG-T---AC
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5937066  63 +   6242583 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--aca-----------------------ggca-----catt---ctg---catc------------atgattg-------c---a------------gcg---------------------------atcgtGAAG-T---AC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        6320  63 +     20839 a--gg--ca----gg-g-----------a---------g-aa------t-t--g-g--g-gg---t---------------g--aca-----------------------ggca-----catt---ctg---catc------------atgattg-------c---a------------gcg---------------------------atcgtgaag-t---ac
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2154355  63 +   4065304 a--gg--ca----tg-g-----------g---------g-aat-----t-t--g-a--g-ag---g---------------a--atg-----------------------aaaa-----catc---ctg---tgta------------ttgattg-------t---c------------atg---------------------------gtagcta-c-c---ac
i Tupaia_chinensis.KB320699.1                            C 0 I 100
s Tupaia_tana.TupTan_flattened_line_97126                     8003  63 -     10553 a--gg--ca----tg-g-----------g---------g-aat-----t-t--g-a--g-ag---g---------------a--atg-----------------------aaaa-----catt---ctg---tgta------------ttgattg-------t---c------------atg---------------------------gtagcta-c-c---ac
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 100
s Ursus_maritimus.KK499267.1                               4849561  50 -   5085361 -----------------------------------------------------t-gg-g-ga---t---------------g--atg-----------------------gaaa-----tgtt---tgg---tatc------------ttcatta-------t---a------------tca---------------------------gtggttaag-t---ac
i Ursus_maritimus.KK499267.1                             I 16 I 55
s Varecia_rubra.k141_590885                                  10115  64 +     50397 a--gg--ca----gg-a-----------g---------g-aat-----t-t--g-g--g-gg---t---------------a--aca-----------------------gaaa-----tgtt---cta---tatc------------ttggttg-------t---g------------gtg---------------------------gtagttaac-c---ac
i Varecia_rubra.k141_590885                              C 0 I 70
s Varecia_variegata.k141_1128296                             10170  64 +     24756 a--gg--ca----gg-a-----------g---------g-aat-----t-t--g-g--g-gg---t---------------a--aca-----------------------gaaa-----tgtt---cta---tatc------------ttggttg-------t---g------------gtg---------------------------gtagttaac-c---ac
i Varecia_variegata.k141_1128296                         C 0 I 70
s Vicugna_pacos.KN270157.1                                 5370997  67 -   5488506 a--gg--ca----caag-----------g---------g-aa--a---a-t-tg-gg-g-gg---a---------------g--ata-----------------------gaca-----tctt---ctt---tatc------------ttgactg-------t---g------------gtg---------------------------atggttaag-t---at
i Vicugna_pacos.KN270157.1                               C 0 I 55
s Vulpes_lagopus.VulLag_flattened_line_30954                  9931  50 -     43706 -----------------------------------------------------t-ag-g-gg---t---------------g--atg-----------------------gaaa-----agtt---cta---tatc------------ttgatga-------t---g------------gca---------------------------gtagttaag-t---ac
i Vulpes_lagopus.VulLag_flattened_line_30954             I 16 I 55
s Xerus_inauris.XerIna_scaffold_48378                        22740  66 -     24430 a--gg--ca----tg-g-----------g---------a-aat-----t-a-gg-g--g-ag--ct---------------a--ata-----------------------aaaa-----tgtt---cca---tatc------------ttgatta-------t---g------------gtg---------------------------gtggttaaa-t---ac
i Xerus_inauris.XerIna_scaffold_48378                    C 0 I 66
s Zalophus_californianus.ZalCal_flattened_line_17732          4299  50 +     86975 -----------------------------------------------------t-tg-g-ga---c---------------g--atg-----------------------gaaa-----tgtt---tgg---tatc------------ttgatta-------t---g------------gca---------------------------gtggttaag-t---ac
i Zalophus_californianus.ZalCal_flattened_line_17732     I 16 I 55
s Zapus_hudsonius.ZapHud_scaffold_11398                      13207  31 +     63895 t--gg--atATCTAG-GA-AGC-CAGGGA---------A-AT-----TG-G-GA-G-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 338 I 82
e Echinops_telfairi.JH980293.1                            48779651 164 + 111700974 I
e Sapajus_macrocephalus.k141_351809                          54316   0 -     80660 C
e Sapajus_apella.ctg103                                    5419275   0 -   5703754 C
e Cebus_unicolor.k141_219506                                 14903   0 -     16904 I
e Cebus_albifrons.Contig27                                25650611   0 +  26074798 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Loris_tardigradus.ctg83                                  1003049  50 +   6120653 I
e Loris_lydekkerianus.k141_2539221                            4210  50 +     11245 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276   0 +     12536 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   52652   8 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584   0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641   0 -      1748 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937   0 +    114563 C
e Sigmodon_hispidus.SigHis_scaffold_60841                    11304   0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152480   8 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482  20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968   0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090   0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384   0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813   0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690  60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385   0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468   0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491   0 +  44047080 C
e Orycteropus_afer.OryAfe_flattened_line_144387               9003  16 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345   0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229   0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831   4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105748664  47 + 199412804 I
e Nycticebus_coucang.k141_771082                                88  47 -      2667 I
e Nycticebus_bengalensis.LG01                            102578243  47 - 196305487 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183   0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422   0 +   7148211 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379  13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466   0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    20898  16 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961   0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50341   0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352   0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344   0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650   0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493   0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293   0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626   0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547   0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577   3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051   0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516   0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312   0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  8618   0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20195104   0 + 205367284 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689   0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752   0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Elephantulus_edwardii.JH947257.1                         1089466 1162 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347   0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175   0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084   0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076   0 +  35494412 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923   0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569   0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Condylura_cristata.JH655891.1                           17547413   8 -  53390261 I
e Chinchilla_lanigera.JH722012.1                           1251498   0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291   0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417   0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157   0 -  23392119 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030   0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310   0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682   0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014   0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932   0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376   0 +  48749331 C
e Bison_bison.KN261452.1                                    200171   0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115   0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905   0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440   0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675   0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192   0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       4854 192 +     62944 GA-T---AAG--G--A-----TT---TGT-TTT----CCTCTTTCATT------GTTA-GGTTCATAAC---------TGAGAGTCG-----AAAAC--ACA--A---GA-------TTAACAAGAGAAAGGCATACA--TAT-TT-----ATT-----------------------------T-------------AACACAAG------TTACACATAACGTGAAGA--CTTCACAA---------------GTGAAGGCCTaa----ca-a---------------aacagcaaaacct--------gtg--------t--------------at-t--t-tta--tgctaaatttggtga---agaagtgtat-----------------a--------gT
s Allactaga_bullata.AllBul_scaffold_9566                     73491 142 -     89534 --------GA--G--C-----Ca---t---ctt----tttca------cccataccta-ggtccgtggc---------tgagg-----actcataac--aaa--a---cacag---ctgaacaagagagaggcatgca--cac-tt-----att-----------------------------tagtatctc-tgtga------g------ttttgcatgacatgaagc--ctgcagaa---------------gtgaggctccag----t--------------------------------------------------------------------------------------------------------------------------------------
i Allactaga_bullata.AllBul_scaffold_9566                 I 86 I 54
s Allenopithecus_nigroviridis.k141_3361533                   12767 197 -     52922 GA-T---AAG--G--A-----TT---TGt-ttt----cctctttcgtt------gtta-ggttcataac---------tgagagtac----taaaac--aaa--a---ggcaga---ttaacgaccaaaaggcataca--cat-tt-----att-----------------------------c-------------aatacaag------ttatacataacatgaaga--cttcagaa---------------gtaaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------gg
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         12710 197 -     28001 GA-T---AAG--G--A-----TT---TGt-ttt----cctctttcgtt------gtta-ggttcataac---------tgagagtac----taaaac--aaa--a---ggcaga---ttaatgaccaaaaggcataca--cat-tt-----att-----------------------------c-------------aatacaag------ttatacataacatgaaga--cttcagaa---------------gtgaaggcctaa----ca-g---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcaaaatttggtga---agacgtgtat-----------------a--------gg
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          3156 197 -     18505 GA-T---AAG--G--A-----TT---TGt-ttt----cctctttcgtt------gtta-ggttcataac---------tgagagtac----taaaac--aaa--a---ggcaga---ttaatgaccaaaaggcataca--cat-tt-----att-----------------------------c-------------aatacaag------ttatacataacatgaaga--cttcagaa---------------gtgaaggcctaa----ca-g---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcaaaatttggtga---agacgtgtat-----------------a--------gg
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           4005 197 -     12518 GA-T---AAG--G--A-----TT---TGt-ttt----cctctttcgtt------gtta-ggttcataac---------tgagagtac----taaaac--aaa--a---ggcaga---ttaatgaccaaaaggcataca--cat-tt-----att-----------------------------c-------------aatacaag------ttatacataacatgaaga--cttcagaa---------------gtgaaggcctaa----ca-g---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcaaaatttggtga---agacgtgtat-----------------a--------gg
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                              1570 192 -     27731 ---T---TAG--A--G-----AT---Ttt-tttt-c-cccctcttgtt------gtca-ggttcataac---------ttagattcc----taaaac--aaa--a---gacaga---ttaacaagagaaagaca--ca--cat-tt-----att-----------------------------t-------------atggcaag------ttttacacgatgtgaaga--cttcacag---------------gtgaagacctaa----ta-a---------------aacagaaaaccct--------gtg--------t--------------at-t--t-tta--tgctaaatttggtaa---ag---tgtgt-----------------a--------gt
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                1695 195 +      3134 ---T---TAG--A--G-----ATTTTTtt-tttt-c-cccctcttgtt------gtca-ggttcataac---------ttagattcc----taaaac--aaa--a---gacaga---ttaacaagagaaagaca--ca--cat-tt-----att-----------------------------t-------------atggcaag------ttttacacgatgtgaaga--cttcacag---------------gtgaagacctaa----ta-a---------------aacagaaaaccct--------gtg--------t--------------at-t--t-tta--tgctaaatttggtaa---ag---tgtgt-----------------a--------gt
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               1830 192 -     45847 ---T---TAG--A--G-----AT---Ttt-tttt-c-cccctcttgtt------gtca-ggttcataac---------ttagattcc----taaaac--aaa--a---gacaga---ttaacaagagaaagaca--ca--cat-tt-----att-----------------------------t-------------atggcaag------ttttacacgatgtgaaga--cttcacag---------------gtgaagacctaa----ta-a---------------aacagaaaaccct--------gtg--------t--------------at-t--t-tta--tgctaaatttggtaa---ag---tgtgt-----------------a--------gt
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                23036 191 +     25266 ---T---TAG--A--G-----AT---t-t-tttt-c-cccctcttgtt------gtca-ggttcataac---------ttagattcc----taaaac--aaa--a---gacaga---ttaacaagagaaagaca--ca--cat-tt-----att-----------------------------t-------------atggcaag------ttttacacgatgtgaaga--cttcacac---------------gtgaagacctaa----ta-a---------------aacagaaaaccct--------gtg--------t--------------at-t--t-tta--tgctaaatttggtaa---ag---tgtgt-----------------a--------gt
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           2220 192 +      2906 ---T---TAG--A--G-----AT---Ttt-tttt-c-cccctcttgtt------gtca-ggttcataac---------ttagattcc----taaaac--aaa--a---gacaga---ttaacaagagaaagaca--ca--cat-tt-----att-----------------------------t-------------atggcaag------ttttacacgatgtgaaga--cttcacag---------------gtgaagacctaa----ta-a---------------aacagaaaaccct--------gtg--------t--------------at-t--t-tta--tgctaaatttggtaa---ag---tgtgt-----------------a--------gt
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            16333 192 -     18578 ---T---TAG--A--G-----AT---Ttt-tttt-c-cccctcttgtt------gtca-ggttcataac---------ttagattcc----taaaac--aaa--a---gacaga---ttaacaagagaaagaca--ca--cat-tt-----att-----------------------------t-------------atggcaag------ttttacacgatgtgaaga--cttcacag---------------gtgaagacctaa----ta-a---------------aacagaaaaccct--------gtg--------t--------------at-t--t-tta--tgctaaatttggtaa---ag---tgtgt-----------------a--------gt
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              1720 194 +     47717 ---T---TAG--A--G-----at---ttt-tttttcccccctcttgtt------gtca-ggttcataac---------ttagactcc----taaaac--aaa--a---gacaga---ttaacaagagaaagaca--ca--cat-tt-----att-----------------------------t-------------atggcaag------ttttacatgatgtgaaga--cttcacag---------------gtgaagacctaa----ta-a---------------aacagaaaaccct--------gtg--------t--------------at-t--t-tta--tgctaaatctggtaa---ag---tgtgt-----------------a--------gt
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             1850 191 -      3544 ---T---TAG--A--G-----AT---t-t-tttt-c-cccctcttgtt------gtca-ggttcataac---------ttagattcc----taaaac--aaa--a---gacaga---ttaacaagagaaagaca--ca--cat-tt-----att-----------------------------t-------------atggcaag------ttttacacgatgtgaaga--cttcacac---------------gtgaagacctaa----ta-a---------------aacagaaaaccct--------gtg--------t--------------at-t--t-tta--tggtaaatttggtaa---ag---tgtgt-----------------a--------gt
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             13070 192 +     50774 ---T---TAG--A--G-----AT---Ttt-tttt-c-cccctcttgtt------gtca-ggttcataac---------ttagattcc----taaaac--aaa--a---gacaga---ttaacaagagaaagaca--ca--cat-tt-----att-----------------------------t-------------atggcaag------ttttacacgatgtgaaga--cttcacac---------------gtgaagacctaa----ta-a---------------aacagaaaaccct--------gtg--------t--------------at-t--t-tta--tgctaaatttggtaa---ag---tgtgt-----------------a--------gt
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  13691 195 -     33861 ---T---TAG--A--G-----at---ttt-ttt----cccctcttgtt------ctca-ggttcataac---------ttagactcc----taaaac--aaa--a---gacaga---ttaacaagagaaagacataca--cat-tt-----att-----------------------------t-------------actgcaag------ttttacatgatgtgaaga--cttc----acaagtgaagaccta-----------a----ca-a---------------aacagaaaagcct--------gtg--------c--------------at-t--t-tta--tgctaaatttggtaa---agaagtgtgt-----------------a--------gt
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            13711 195 -     34016 ---T---TAG--A--G-----at---ttt-ttt----cccctcttgtt------ctca-ggttcataac---------ttagactcc----taaaac--aaa--a---gacaga---ttaacaagagaaagacataca--cat-tt-----att-----------------------------t-------------actgcaag------ttttacatgatgtgaaga--cttc----acaagtgaagaccta-----------a----ca-a---------------aacagaaaagcct--------gtg--------c--------------at-t--t-tta--tgctaaatttggtaa---agaagtgtgt-----------------a--------gt
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4296108 195 -   5030052 ---t---tag--a--g-----at---ttt-ttt----cccctcttgtt------CTCA-GGTTCATAAC---------TTAGACTCc----taaaac--aaa--a---gacaga---ttaacaagagaaagacataca--cat-tt-----att-----------------------------t-------------actgCAAG------TTTTACATGATGTGAAGA--CTTC----ACAAGTGAAGAccta-----------a----ca-a---------------aacagaaaagcct--------GTG--------C--------------AT-T--T-TTA--TGCTAAATTTGGTAA---AGAAGTGTGT-----------------A--------GT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             13713 195 -     34685 ---T---TAG--A--G-----at---ttt-ttt----cccctcttgtt------ctca-ggttcataac---------ttagactca----taaaac--aaa--a---gacaga---ttaacaagagaaagacataca--cat-tt-----act-----------------------------t-------------actgcaag------ttttacatgatgtgaaga--cttc----acaagtgaagaccta-----------a----ca-a---------------aacagaaaagcct--------gtg--------c--------------at-t--t-tta--tgctaaatttagtaa---agaagtgtgt-----------------a--------gt
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               26834 198 -     47192 ---TGATTAG--A--G-----At---ttt-tct----cccctcttgtt------ctca-ggttcataac---------ttagactcc----taaaac--aaa--a---gacaga---ttaacaagagaaagacataca--cat-tt-----att-----------------------------t-------------actgcaag------ttttacatgatgtgaaga--cttc----acaagtgaagaccta-----------a----ca-a---------------aacagaaaagcct--------gtg--------c--------------at-t--t-tta--tgctaaatttggtaa---agaagtgtgt-----------------a--------gt
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      10720 102 +     20879 -------AGA--T--A-----CC---A---CTT----TCTCA------CCCATTGCTA-AATTCATGAC---------TGAGA-----CTC-ATACCACAAA--A---GA-------TTAATAGGACAAAAGTACACA--AAT-CT-----Gtttaat-----c-t-----------------a-------------a------g------ttttaca-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 67 I 17
s Arctocebus_calabarensis.k141_2318572                       10077  94 +     14667 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ataaa------ttttaca-------gggc--cttcaagt---------------gtaaaaacaact----ca-g---------------aacatggaaacat--------gca--------t--------------at-t--t-tta--tgttaagtttgatac---agaactagat-----------------a----gtt-ac
i Arctocebus_calabarensis.k141_2318572                   I 149 C 0
s Avahi_laniger.k141_765380                                  52523 197 -     92717 ---------------a-----ct---t-c-ttt----cctcacccctc------gata-ggttcatggc---------taagaccca----taaaac--aaaagaaaagacaga---tgaacaaaggaaaagcataca--aat-tt-----att-----------------------------t-------------catataaa------ttttacatggcacggagc--cttcagaa---------------gtgaaaacccct----ca-a---------------aatagggaaacct--------gca--------t--------------at-t--t-ttc--tgctaagtctgagaa---agaagtggat-----------------a----gtc-gt
i Avahi_laniger.k141_765380                              I 70 C 0
s Avahi_peyrierasi.k141_1424874                              53152 197 +     85213 ---------------a-----ct---t-c-ttt----cctcacccctc------gaca-ggttcatggc---------taagaccca----taaaac--aaaagaaaagacaga---tgaacaaaggaaaagcataca--aat-tt-----att-----------------------------t-------------catataaa------ttttacatggcacggagc--cttcagaa---------------gtgaaaacccct----ca-a---------------aatagggaaacct--------gca--------t--------------at-t--t-ttc--tgctaagtctgagaa---agaagtggat-----------------a----gtc-gt
i Avahi_peyrierasi.k141_1424874                          I 70 C 0
s Callibella_humilis.k141_1278103                             3452 195 -     10423 ---T---TAG--A--G-----AT---TGT-TTT----CCCCTCTTGTT------GTCa-ggttcataac---------ttagattcc----taaaac--aaa--a---gacaga---ttaacaagagaaaggcataca--cat-tc-----att-----------------------------t-------------attgcaag------ttttacatgatgtgaaga--cttt------------------------------g----ca-agtgaagacctaacagaacaggaaaccct--------gtg--------c--------------at-t--t-tta--tgctaaagttggtaa---tgaagggtgt-----------------a--------gc
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             22954 195 +     31915 ---T---TAG--A--G-----AT---TGT-ttt----cctgtcttgtt------gtca-ggttcataac---------ttagattcc----taaaac--aaa--a---gacaga---ttaacaagagaaagacataca--cat-tc-----att-----------------------------t-------------attgcaag------ttttacatgatgtgaaga--cttt------------------------------g----ca-agtgaagacctaacggaacaggaaaccct--------gtg--------t--------------at-t--t-tta--tgctaaagttggtaa---agaagggtgt-----------------a--------gc
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            3423 190 +      5267 ---T---TAG--A--G-----AT---TGT-TTT----CCCCTCTTGTT------GTCa-ggttcataac---------ttagattcc----taaaac--aaa--a---gacaga---ttaacaagagaaaggcataca--cat-tc-----att-----------------------------t-------------attgcaag------ttttacatgatgtgaaga--cttt------------------------------g----ca-agtgaagacc-a----aacaggaaaccct--------gtg--------c--------------at-t--t-gta--tgctaaagttggtaa---agaagggtgt-----------------a--------gc
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23588637 190 - 189096842 ---T---TAG--A--G-----At---tgt-ttt----cccctcttgtt------gtca-ggttcataac---------ttagattcc----tacaac--aaa--a---gacaga---ttaacaagagaaaggcataca--cat-tc-----att-----------------------------t-------------attgcaag------ttttacatgatgtgaaga--cttt------------------------------G----CA-A-----GTGAAGACCGAACAGGAAACCCT--------GTG--------C--------------AT-T--T-TTA--TGCTAAAGTTGGTAA---TGAAGGGTGT-----------------A--------GC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             10167 190 -     12001 ---T---TAG--A--G-----AT---TGT-TTT----CCCCTCTTGTT------GTCa-ggttcataac---------ttagattcc----tacaac--aaa--a---gacaga---ttaacaagagaaaggcataca--cat-tc-----att-----------------------------t-------------attgcaag------ttttacatgatgtgaaga--cttt------------------------------g----ca-agtgaagacc-----gaacaggaaaccct--------gtg--------c--------------at-t--t-tta--tgctaaagttggtaa---tgaagggtgt-----------------a--------gc
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Carlito_syrichta.NW_007259797.1                           154887  82 -    496798 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAC--CCTCAGAA---------------GCGACCCtccca----ca-a---------------aaaaaagaagact--------gta--------t--------------AG-T--T-TTA--TGCTGAGTTTGATGA---TGAAGCTGAT-----------------G----TTT-GT
i Carlito_syrichta.NW_007259797.1                        I 146 I 30
s Castor_canadensis.CasCan_scaffold_2074                    136724  31 +    179628 --------------------------------------CATT------------GCTG-TATTTCTGGTTTAAGCCCCTGAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Castor_canadensis.CasCan_scaffold_2074                 I 87 C 0
s Cebuella_niveiventris.k141_1251222                          8077 195 -     11392 ---T---TAG--A--G-----AT---TGT-TTT----CCCCTCTTGTT------GTCa-ggttcataac---------ttagattcc----taaaac--aaa--a---gacaga---ttaacaagagaaaggcataca--cat-tc-----att-----------------------------t-------------attgcaag------ttttacatgatgtgaaga--cttt------------------------------g----ca-agtgaagacctaacagaacaggaaaccct--------gtg--------c--------------at-t--t-tta--tgctaaagttggtaa---tgaagggtgt-----------------a--------gc
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               4175 195 -      7577 ---T---TAG--A--G-----AT---TGT-TTT----CCCCTCTTGTT------GTCa-ggttcgtaac---------ttagattcc----taaaac--aaa--a---gacaga---ttaacaagagaaaggcataca--cat-tc-----att-----------------------------t-------------attgcaag------ttttacatgatgtgaaga--cttt------------------------------g----ca-agtgaagacctaacagaacaggaaaccct--------gtg--------c--------------at-t--t-tta--tgctaaagttggtaa---tgaagggtgt-----------------a--------gc
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_olivaceus.k141_1000828                                2112 193 -      2944 ---T---TAG--A--G-----AT-----T-Ttt----tccctcttgtt------gtca-ggttcatagc---------taagactcc----taaagc--aaa--a---gaca-a-a-ttaacaagagaaagacataca--ggt-tt-----att-----------------------------t-------------attgcaag------ttttacatgatgtgaaga--cttcacaa---------------gtgaagacctaa----ca-a---------------aacagaaaaccct--------gtg--------t--------------at-t--t-tta--tgctaaatttggtaa---agaagtgtgt-----------------a--------ac
i Cebus_olivaceus.k141_1000828                           C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         4321  76 +     31688 gg-a---aga--g--a-----tt---t-c-ttt----tctcacccatc------gcta-gtttcacggt---------tgaggtccc----tataac--aaa--a---gacaga---caaacaagaga-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Cephalopachus_bancanus.k141_1423433                    I 70 I 82
s Cercocebus_atys.KQ010504.1                               4473721 196 +   4669795 GA-t---aag--g--a-----tt---tt--ttt----cctctttcgcT------GTTA-GGTTCATAAC---------TGAGAGTAC----TAAAAC--AAA--A---GA---CACACTAACGACCGaaaggcataca--cat-tt-----att-----------------------------t-------------aatacaag------TTACACAGAACGTGAAGA--CTTCAGAA---------------GTGAAGGcctaa----ca-a---------------aacagaaaaacct--------gtG--------T--------------AT-T--T-TTA--CGCAAAATTTGGTGA---AGAAGTGTAT-----------------A--------GG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        12270 196 -     19203 GA-T---AAG--g--a-----tt---tt--ttt----cctctttcgtt------gtta-ggttcataac---------tgagagtac----taaaac--aaa--a---gacaga---cgaacgaccgaaaggcataca--cat-tt-----att-----------------------------t-------------aatacaag------ttacacagaacgtgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gcg--------t--------------at-t--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------gg
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           6692 196 +      8260 GA-T---AAG--G--A-----TT---Tt--ttt----cctctttcgct------gtta-ggttcataac---------tgagagtac----taaaac--aaa--a---gacaca---ctaacgaccgaaaggcataca--cat-tt-----att-----------------------------t-------------aatacaag------ttacacagaacgtgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------gg
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           6918 196 +     27781 GA-T---AAG--g--a-----tt---tt--ttt----cctctttcgtt------gtta-ggttcataac---------tgagagtac----taaaac--aaa--a---gacaga---ctaacgaccgaaaggcataca--cat-tt-----att-----------------------------t-------------aatacaag------ttacacagaacgtgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------gg
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         7077 197 -     20310 GG-T---AAG--G--A-----TT---TGT-TTT----CCTCTTTCGTT------GTTa-ggttcgtaac---------tgagagtac----taaaac--aaa--a---ggcaga---ttaacgaccaaagggcataca--cat-tt-----att-----------------------------c-------------aatacaag------ttatatataacatgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------gg
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          10056 197 +     29689 GA-T---AAG--G--A-----TT---TGt-ttt----cctctttcgtt------gtta-ggttcgtaac---------tgagagtac----taaaac--aaa--a---ggcaga---ttaacgaccaaaaggcataca--cat-tt-----att-----------------------------c-------------aatacaag------ttatacatgacatgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcaaaatttggtaa---agaagtgtat-----------------a--------gg
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            4487 197 +      9989 GA-T---AAG--G--A-----TT---TGt-ttt----cctctttcgtt------gtta-ggttcataac---------tgagagtac----taaaac--aaa--a---ggcaga---ttaacgaccaaaaggcataca--cat-tt-----att-----------------------------c-------------aatacaag------tgatacataacatgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------gg
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          12735 197 -     27936 GA-T---AAG--G--A-----TT---TGt-ttt----cctctttcgtt------gtta-ggttcataac---------tgagagtac----taaaac--aaa--a---ggcaga---ttaacgaccaaaaggcataca--cat-tt-----att-----------------------------c-------------aatacaag------ttatacataacatgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------gg
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            1601 197 -     17152 GA-T---AAG--G--A-----TT---TGt-ttt----cctctttcgtt------gtta-ggttcataac---------tgagagtac----taaaac--aaa--a---ggcaga---ttaacgaccaaaaggcataca--cat-tt-----att-----------------------------c-------------aatacaag------tgatacataacatgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------gg
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38815139 197 +  39242232 GA-T---AAG--G--A-----TT---TGT-TTT----CCTCTTTCGTT------GTTa-ggttcgtaac---------tgagagtac----taaaac--aaa--a---ggcaga---ttaacgaccaaagggcataca--cat-tt-----att-----------------------------c-------------aatacaag------ttatatataacatgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------gg
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21220830 197 -  21565898 GA-T---AAG--G--A-----TT---TGt-ttt----cctctttcgtt------gtta-ggttcataac---------tgagagtac----taaaac--aaa--a---ggcaga---ttaacgaccaaaaggcataca--cat-tt-----att-----------------------------c-------------aatacaag------tgatacataacatgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------gg
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       37948 197 -     53127 GA-T---AAG--G--A-----TT---TGt-ttt----cctctttcgtt------gtta-ggttcataac---------tgagagtac----taaaac--aaa--a---ggcaga---ttaacgaccaaaaggcataca--cat-tt-----att-----------------------------c-------------aatacaag------tgatacgtaacatgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtc--------t--------------at-t--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------gg
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        5219 197 +      7159 GA-T---AAG--G--A-----TT---TGT-TTT----CCTCTTTCGTT------GTTa-ggttcgtaac---------tgagagtac----taaaac--aaa--a---ggcaga---ttaacgaccaaagggcataca--cat-tt-----att-----------------------------c-------------aatacaag------ttatatgtaacatgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------gg
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       12751 197 -     27947 GA-T---AAG--G--A-----TT---TGt-ttt----cctctttcgtt------gtta-ggttcataac---------tgagagtac----taaaac--aaa--a---ggcaga---ttaacgaccaaaaggcataca--cat-tt-----att-----------------------------c-------------aatacaag------tgatacataacatgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------gg
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         12724 197 +     17596 GA-T---AAG--G--A-----TT---TGt-ttt----cctctttcgtt------gtta-ggttcataac---------tgagagtac----taaaac--aaa--a---ggcaga---ttaacgaccaaaaggcataca--cat-tt-----att-----------------------------c-------------aatacaag------tgatacataacatgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------gg
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          1958 197 +     26000 GA-T---AAG--G--A-----TT---TGt-ttt----cctctttcgtt------gtta-ggttcataac---------tgagagtac----taaaac--aaa--a---ggcaga---ttaacgaccaaaaggcataca--cat-tt-----att-----------------------------c-------------aatacaag------ttatacataacatgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------gg
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             19979 128 -     52598 ---------------------------------------------------------------------------------------------------------------------------aaagaaaaacataca--aat-tt-----att-----------------------------t-------------aatacaaa------ttttacatgacacggagc--cttcagac---------------gtgaaaatccct----ca-a---------------aatagggaaacct--------gaa--------t--------------at-t--t-ttg--tgctaagtttgagaa---agaagtggat-----------------a----gtt-gc
i Cheirogaleus_major.k141_333249                         I 116 C 0
s Cheirogaleus_medius.k141_1055463                           15334 140 +     57038 ------------------------------------------------------------------------------------------------------------gacaga---tgaacaaaagaaaaacataca--aat-tt-----att-----------------------------t-------------aatacaaa------ttttacatgacacggagc--cttcagac---------------gtgaaaatccct----ca-a---------------aataggtaaacct--------gca--------t--------------at-t--t-ttg--tgctaagtttgagaa---agaagtggat-----------------a----gtt-gc
i Cheirogaleus_medius.k141_1055463                       I 120 C 0
s Chlorocebus_aethiops.ctg25                              18426708 197 -  18827391 GA-T---AAG--G--A-----TT---TGt-ttt----cctctttcgtt------gtta-ggttcataac---------tgagagtac----taaaac--aaa--a---ggcaga---ttaatggccaaaaggcataca--cat-tt-----att-----------------------------c-------------aatacaag------ttatacataacatgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcaaaatttggtga---agacgtgtat-----------------a--------gg
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       13145 197 -     50209 GA-T---AAG--G--A-----TT---TGt-ttt----cctctttcgtt------gtta-ggttcataac---------tgagagtac----taaaac--aaa--a---ggcaga---ttaacgaccaaaaggcataca--cat-tt-----att-----------------------------c-------------aatacaag------ttatacataacatgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcaaaatttggtga---agacgtgtat-----------------a--------gg
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135420145 197 + 135778131 GA-T---AAg--g--a-----tt---tgt-ttt----cctctttcgTT------GTTA-GGTTCATAAC---------TGAGAGTAC----taaaac--aaa--a---ggcaga---ttaatggccaaaaggcataca--cat-tt-----att-----------------------------c-------------AATACAAG------TTATACATAATATGAAGA--CTTCAGAA---------------GTGAAGGcccaa----ca-a---------------aacagaacaacct--------gtg--------t--------------at-t--t-tta--tgcaAAATTTGGTGA---AGACGTGTAT-----------------A--------GG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1908659 197 +   2368649 CA-T---AAg--g--a-----tt---tgt-ttt----cctctttcgCT------GTTA-GGTTGGTAAC---------TGAGAGTAc----taaaac--aaa--a---gacaga---ttaacgaccgaaaggcataca--cat-tt-----att-----------------------------t-------------gatACAAG------TTATACATAACGTGAAGA--CTTCAGAA---------------GTGAAGGCCTAA----CA-G---------------AACAGAAAAACCT--------GTG--------T--------------AT-T--T-TTA--TGCAAAATTTGGTGA---AGAAGTGTAT-----------------A--------GT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199948338 197 + 200372422 GA-T---AAG--G--A-----TT---TGt-ttt----cctctttcgct------gtta-ggttcctaac---------tgagagtac----taaaac--aaa--a---gacaga---ttaacgaccgaaaggcataca--cat-tt-----att-----------------------------t-------------gatacaag------ttatacataacgtgaaga--cttcagaa---------------gtgaaggcctaa----ca-g---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------gt
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              35197 197 +     84244 GA-T---AAG--G--A-----TT---TGt-ttt----cctctttcgct------gtta-ggttcgtaac---------tgagagtac----taaaac--aaa--a---gacaga---ttaacgaccgaaaggcataca--cat-tt-----att-----------------------------t-------------gatacaag------ttatacataacgtgaaga--cttcagaa---------------gtgaaggcctaa----ca-g---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------gt
i Colobus_polykomos.k141_906115                          C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    835965 147 +   1526836 ag-a---gga--g--a-----tt---t--cttt----tctca------------gttgaagtttatgac---------tgaga-------atataac--aga--a---gacag---gttaaggaaagaaaagcacaca--agt-tt-----gtt-----------------------------a-------------a------a------atgtacatgacatggggc--caacagaa---------------gtgaagaccccc----ca-c---------------cgtgtggacactt--------tca--------g-----------------------------------------------------------------------------------
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 74 I 36
s Daubentonia_madagascariensis.ctg71                      12536145 204 -  12879189 ag-a---aaa--g--a-----tt---t-a-ttt----tctcacccctg------aata-ggttcatggc---------taggatcca----taaaac--agaacaaaagacaga---ttaacaaaagaaaagcataca--aat-tt-----att-----------------------------t-------------agtataaa------ttttacatgacacagaac--cttcagaa---------------gtgaaaactcct----ca-a---------------aataaggaaacct--------gca--------t--------------at-t--t-tta--tgctaagtttgagaa---agaagtggat-----------------a----gtc-at
i Daubentonia_madagascariensis.ctg71                     I 66 C 0
s Erythrocebus_patas.Contig38                             21203316 197 -  21539334 GA-T---AAG--G--A-----TT---TGt-ttt----cctctttcgtt------gtta-ggttcataac---------tgagagtac----taaaac--aaa--a---ggcaga---ttaacgaccaaaaggcataca--cat-tt-----att-----------------------------c-------------aatacaag------ttatacataacatgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcaaaatttggtga---agacgtgtat-----------------a--------gg
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              12629 197 -     14127 ---------------a-----ct---t-c-ttt----tctgacccctc------gata-ggttcatggc---------tgagaccca----taaacc--aaaagacaagataga---tgaacaaaagaaaaacataca--aat-tt-----att-----------------------------t-------------aatataaa------ttttacatgactcagagc--cttcagaa---------------gtgaaaaccccg----ca-a---------------aatagggaaacct--------aca--------t--------------at-t--t-ttg--tgctaagtttgagaa---agaagtggat-----------------a----gtt-gt
i Eulemur_albifrons.k141_342033                          I 70 C 0
s Eulemur_collaris.k141_377015                                5327 197 -     16928 ---------------a-----ct---t-c-ttt----tctgacccctc------gata-ggttcatggc---------tgagaccca----taaacc--aaaagacaagataga---tgaacaaaagaaaagcataca--aat-tt-----att-----------------------------t-------------aatataaa------ttttacatgactcagagc--cttcagaa---------------gtgaaaaccccg----ca-a---------------aatagggaaacct--------aca--------t--------------at-t--t-ttg--tgctaagtttgagaa---agaagtggat-----------------a----gtt-gt
i Eulemur_collaris.k141_377015                           I 70 C 0
s Eulemur_coronatus.k141_885031                              14356 197 -     25546 ---------------a-----ct---t-c-ttt----tctgacccctc------gata-ggttcatggc---------tgagaccca----taaacc--aaaagacaagataga---tgaacaaaagaaaagcataca--aat-tt-----att-----------------------------t-------------aatataaa------ttttacatgactcagagc--cttcagaa---------------gtgaaaaccccg----ca-a---------------aatagggaaacct--------gca--------t--------------at-t--t-ttg--tgctaagtttgagaa---agaagtggat-----------------a----gtt-gt
i Eulemur_coronatus.k141_885031                          I 70 C 0
s Eulemur_flavifrons.k141_1184614                            11554 197 +     26330 ---------------a-----ct---t-c-ttt----tctcatccctc------gata-ggttcatggc---------tgagaccca----taaagc--aaaagacaagataga---tgaacaaaagaaaagcataca--aat-tt-----att-----------------------------t-------------aatataaa------ttttacatgactcagacc--cttcagaa---------------gtgaaaaccccg----ca-a---------------aatagggaaacct--------gca--------t--------------at-t--t-ttg--tgctaagtttgagaa---agaagtggat-----------------aa----tt-gt
i Eulemur_flavifrons.k141_1184614                        I 70 C 0
s Eulemur_fulvus.k141_544389                                 12794 197 +     23973 ---------------a-----ct---t-c-ttt----tctgacccctc------gata-ggttcatggc---------tgagaccca----taaacc--aaaagacaagataga---tgaacaaaagaaaagcataca--aat-tt-----att-----------------------------t-------------aatataaa------ttttacatgactcagagc--cttcagaa---------------gtgaaaaccccg----ca-a---------------aatagggaaacct--------aca--------t--------------at-t--t-ttg--tgctaagtttgagaa---agaagtggat-----------------a----gtt-gt
i Eulemur_fulvus.k141_544389                             I 70 C 0
s Eulemur_macaco.k141_1562045                                11554 197 +     75513 ---------------a-----ct---t-c-ttt----tctcacccctc------gata-ggttcatggc---------tgagaccca----taaagc--aaaagacaagataga---tgaacaaaagaaaagcataca--aat-tt-----att-----------------------------t-------------aatataaa------ttttacatgactcagacc--cttcagaa---------------gtgaaaaccccg----ca-a---------------aatagggaaacct--------gca--------t--------------at-t--t-ttg--tgctaagtttgagaa---agaagtggat-----------------a----gtt-gt
i Eulemur_macaco.k141_1562045                            I 70 C 0
s Eulemur_mongoz.k141_232305                                  9492 197 +     97555 ---------------a-----ct---t-c-ttt----tctgacccctc------gata-ggttcatggc---------taagaccca----taaacc--aaaagataagataga---tgaacaaaagaaaagcataca--aat-tt-----att-----------------------------t-------------aatataaa------ttttacatgactcagagc--cttcagaa---------------gtgaaaaccccg----ca-a---------------aatagggaaatct--------gca--------t--------------at-t--t-ttg--tgctaagtttgagaa---agaagtggat-----------------a----gtt-gt
i Eulemur_mongoz.k141_232305                             I 70 C 0
s Eulemur_rubriventer.k141_571033                            12411 197 +     26496 ---------------a-----ct---t-c-ttt----tctcacccctc------aata-ggttcatggc---------tgagaccca----taaagc--aaaagacaagataga---tgaacaaaagaaaagcataca--aat-tt-----att-----------------------------t-------------aatataaa------ttttacatgactcagagc--cttcagaa---------------gtgaaaaccccg----ca-a---------------aatagggaaacct--------gca--------t--------------at-t--t-ttg--tgctaagtttgagaa---agaagtggat-----------------a----gtt-gt
i Eulemur_rubriventer.k141_571033                        I 70 C 0
s Eulemur_rufus.k141_1476633                                  3029 197 -     17153 ---------------a-----ct---t-c-ttt----tctgacccctc------gata-ggttcatggc---------tgagaccca----taaacc--aaaagacaagataga---tgaacaaaagaaaagcataca--aat-tt-----att-----------------------------t-------------aatataaa------ttttacatgactcagagc--cttcagaa---------------gtgaaaaccccg----ca-a---------------aatagggaaacct--------aca--------t--------------at-t--t-ttg--tgctaagtttgagaa---agaagtggat-----------------a----gtt-gt
i Eulemur_rufus.k141_1476633                             I 70 C 0
s Eulemur_sanfordi.k141_1122526                              12605 197 +    111500 ---------------a-----ct---t-c-ttt----tctgacccctc------gata-ggttcatggc---------tgagaccca----taaacc--aaaagacaagataga---tgaacaaaagaaaagcataca--aat-tt-----att-----------------------------t-------------aatataaa------ttttacatgactcagagc--cttcagaa---------------gtgaaaacaccg----ca-a---------------aatagggaaacct--------aca--------t--------------at-t--t-ttg--tgctaagtttgagaa---agaagtggat-----------------a----gtt-gt
i Eulemur_sanfordi.k141_1122526                          I 70 C 0
s Galago_moholi.ctg2040                                     425024  94 -    453645 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ctaaa------ttttaca-------gggc--ctttaaga---------------gtgaaaatacct----cc-a---------------aacagggaaacat--------cca--------t--------------at-t--t-tta--tgctaagtttgataa---agaactagat-----------------a----gtt-ac
i Galago_moholi.ctg2040                                  I 145 C 0
s Galago_senegalensis.k141_631886                             2731  94 +     11339 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ctaaa------ttttaca-------gggc--ctttaaga---------------gtgaaaatacct----cc-a---------------aacaaggaaacat--------cca--------t--------------at-t--t-tta--tgctaagtttgataa---agaactagat-----------------a----gtt-ac
i Galago_senegalensis.k141_631886                        I 145 C 0
s Galagoides_demidoff.k141_1959596                            6538  94 +      6795 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ctaaa------ttttaca-------gggc--ctttaaga---------------ctgaaaatatct----cc-a---------------aacagggaaacat--------gca--------t--------------at-t--t-tta--tgctaagtttgataa---agaactagat-----------------a----gtt-ac
i Galagoides_demidoff.k141_1959596                       I 144 C 0
s Galeopterus_variegatus.GalVar_scaffold_416291                946 196 +      1204 ag-a---aga--g--a-----tt---t-c-ttt----tctcacccatt------gcta-ggttcacagc---------tgcgacctc----cataac--aaa--a---gataga---ttaacaagagaaaagcatgca--cat-at-----att-----------------------------t-------------aggagaag------ttttgcatgacacggagc--cttcagaa---------------gtgaagacccaa----ag-g---------------aacagagaaaccc--------gca--------t--------------at-t--t-tta--tgttacgtttggtga---aagagag--------------------a----gtt-gt
i Galeopterus_variegatus.GalVar_scaffold_416291          I 66 n 66
s Gorilla_beringei.k141_3596273                              14106 192 -     32273 GA-T---AAG--G--A-----TT---TGT-ttt----cctctttcatt------gtta-ggttcataac---------tgagagtcg-----aaaac--aaa--a---ga-------ttaacaagagaaaggcgtaca--tat-tt-----att-----------------------------t-------------aacacaag------ttatacataacgtgaaga--cttcacaa---------------gtgaaggcctaa----ca-a---------------aacagcaaaacct--------gtg--------t--------------at-t--t-tta--cgctaaatttggtga---agaagtgtat-----------------a--------gt
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578336.1                              33185713 192 -  33314783 GA-T---AAg--g--a-----tt---tgt-ttt----cctctttcatt------gtta-ggttcataac---------tgagagtcg-----aaaac--aaa--a---ga-------ttaacaagagaaaggcataca--tat-tt-----att-----------------------------t-------------aacacaag------ttatacataacgtgaaga--cttcacaa---------------gtgaaggcctaa----ca-a---------------aacagcaaaacct--------gtg--------t--------------at-t--t-tta--cgctaaatttggtga---agaagtgtat-----------------a--------gt
i Gorilla_gorilla.LT578336.1                             n 0 I 374
s Hapalemur_alaotrensis.k141_170648                           5684 197 -     19426 ---------------a-----ct---t-c-ttt----tctcacccctc------gata-ggttcatagc---------taagaccca----taaaac--aaaagaaaagacaga---tgaacaaaagaaaagcataca--aat-tt-----att-----------------------------t-------------aatataaa------ttttacatgattcagagc--cttcagaa---------------gtgaaaaccctt----ca-a---------------aatagggaaatct--------cca--------t--------------at-t--t-ttg--tgctaagtttgagaa---agaagtggat-----------------a----gtt-gt
i Hapalemur_alaotrensis.k141_170648                      I 70 C 0
s Hapalemur_gilberti.k141_488810                             10833 197 -     15286 ---------------a-----ct---t-c-ttt----tctcacccctc------gata-ggttcatagc---------taagaccca----taaaac--aaaagaaaagacaga---tgaacaaaagaaaagcataca--aat-tt-----att-----------------------------t-------------aatataaa------ttttacatgattcagagc--cttcagaa---------------gtgaaaaccctt----ca-a---------------aatagggaaatct--------cca--------t--------------at-t--t-ttg--tgctaagtttgagaa---agaagtggat-----------------a----gtt-gt
i Hapalemur_gilberti.k141_488810                         I 70 C 0
s Hapalemur_griseus.k141_1511508                             12472 197 +     18253 ---------------a-----ct---t-c-ttt----tctcacccctc------gata-ggttcatagc---------taagaccca----taaaac--aaaagaaaagacaga---tgaacaaaagaaaagcataca--aat-tt-----att-----------------------------t-------------aatataaa------ttttacatgattcagagc--cttcagaa---------------gtgaaaaccctt----ca-a---------------aatagggaaatct--------cca--------t--------------at-t--t-ttg--tgctaagtttgagaa---agaagtggat-----------------a----gtt-gt
i Hapalemur_griseus.k141_1511508                         I 70 C 0
s Hapalemur_meridionalis.k141_248335                         12573 197 -     41752 ---------------a-----ct---t-c-ttt----tctcacccctc------gata-ggttcatagc---------taagaccca----taaaac--aaaagaaaagacaga---tgaacaaaagaaaagcataca--aat-tt-----att-----------------------------t-------------aatataaa------ttttacatgattcagagc--cttcagaa---------------gtgaaaaccctt----ca-a---------------aatagggaaatct--------cca--------t--------------at-t--t-ttg--tgctaagtttgagaa---agaagtggat-----------------a----gtt-gt
i Hapalemur_meridionalis.k141_248335                     I 70 C 0
s Hapalemur_occidentalis.k141_907772                         12411 197 -     16460 ---------------a-----ct---t-c-ttt----tctcacccctc------gata-ggttcatagc---------taagaccca----taaaac--aaaagaaaagacaga---tgaacaaaagaaaagcataca--aat-tt-----att-----------------------------t-------------aatataaa------ttttacatgattcagagc--cttcagaa---------------gtgaaaaccctt----ca-a---------------aatagggaaatct--------cca--------t--------------at-t--t-ttg--tgctaagtttgagaa---agaagtggat-----------------a----gtt-gt
i Hapalemur_occidentalis.k141_907772                     I 70 C 0
s Hoolock_leuconedys.ctg274                                    432920 193 +    630532 GA-T---AAA--G--A-----TT---TGT-ttt----cctctttcatt------gtta-ggttcgtaac---------tgagagtcg----taaaac--aaa--a---ga-------ttaacaagagaaaggcatgca--cat-tt-----att-----------------------------t-------------aacacaag------ttatacataacgtgaaga--cttcacaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgctaaatttggtga---agaagtgtag-----------------a--------gt
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_232023                                 686 193 -     12752 ga-t---aaa--g--a-----tt---tgt-ttt----cctctttcatt------gtta-ggttcgtaac---------tgagagtcg----taaaac--aaa--a---ga-------ttaacaagagaaagtcataca--cat-tt-----att-----------------------------t-------------aacacaag------ttatacataacgtgaaga--cttcacaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgctaaatttggtga---agaagtgtag-----------------g--------gt
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                                730 193 +     14092 ga-t---aaa--g--a-----tt---tgt-ttt----cctctttcatt------gtta-ggttcgtaac---------tgagagtcg----taaaac--aaa--a---ga-------ttaacaagagaaaggcataca--cat-tt-----att-----------------------------t-------------aacacaag------ttatacataacgtgaaga--cttcacaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgctaaatttggtga---agaagtgtag-----------------a--------gt
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189541513 193 - 191637585 ga-t---aaa--g--a-----tt---tgt-ttt----cctctttcatt------gtta-ggttcgtaac---------tgagagtcg----taaaac--aaa--a---ga-------ttaacaagagaaaggcataca--cat-tt-----att-----------------------------t-------------aacacaag------ttatacataacgtgaaga--cttcacaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgctaaatttggtga---agaagtgtag-----------------a--------gt
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3334407 193 -  11177569 ga-t---aaa--g--a-----tt---tgt-ttt----cctctttcatt------gtta-ggttcgtaac---------tgagagtca----taaaac--aaa--a---ga-------ttaacaagagaaaggcataca--cat-tt-----att-----------------------------t-------------aacacaag------ttatacataacgtgaaga--cttcacaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgctaaatttggtga---agaagtgtag-----------------a--------gt
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7518730 156 -   7955117 ag-a---aaa--g--a-----tc---t---ttt----tctca------cccattgctg-agttcatggc---------tgaga------ctcataccacaaa--a---gaca-a------ataagacaaaagcataca--aac-tt-----gtttaatat-----------------------a-------------a------g------ttttacgtaacaggaagc--ctgaagaa---------------ttaaagattcac----ag-a---------------aatgtggaaatta--------tca--------t-----------------------------------------------------------------------------------
i Ictidomys_tridecemlineatus.JH393364.1                  I 66 I 37
s Indri_indri.k141_3655594                                   21376 197 +     31101 ---------------a-----ct---t-c-ttt----cctcaccccta------gata-ggttcatggc---------taggaccca----taaaac--aaaagaaaagacaga---tgaacaaaggaaaagcataca--aat-tt-----att-----------------------------t-------------aatataaa------ttttacatggcatggagc--cttcagaa---------------gtgaaaacccct----ca-a---------------aatagggaaacct--------aca--------t--------------at-t--t-ttc--tgctaagtttgagaa---agaagtggat-----------------a----gtc-gt
i Indri_indri.k141_3655594                               I 70 C 0
s Lemur_catta.scaffold_24                                 15522916 197 -  30322482 ---------------a-----ct---t-c-ttt----tctcacccctc------gata-ggttcatggc---------taagaccca----taaaac--aaaagaaaagacaga---tgaacaaaagaaaagcataca--aat-tt-----att-----------------------------t-------------aatataaa------ttttacatgactcagagc--cttcagaa---------------gtgaaaaccctt----ca-a---------------aatagggaaacct--------gca--------t--------------at-t--t-ttg--tgctaagtttgagaa---agaagtggat-----------------a----gtt-gt
i Lemur_catta.scaffold_24                                I 70 C 0
s Leontocebus_fuscicollis.k141_1820339                        5799  81 +     64341 ------------------------------------------------------------gttcataac---------ttacactcc----taaaac--aaa--a---gacaga---ttaacaagagaaagacataca--tgt-tc-----att-----------------------------t-------------attgcaag------ttttacatg-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Leontocebus_fuscicollis.k141_1820339                   I 22 I 49
s Leontocebus_illigeri.k141_3350179                           3126  81 +      4941 ------------------------------------------------------------gttcataac---------ttacactcc----taaaac--aaa--a---gacaga---ttaacaagagaaagacataca--tgt-tc-----att-----------------------------t-------------attgcaag------ttttacatg-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Leontocebus_illigeri.k141_3350179                      I 22 I 49
s Leontocebus_nigricollis.k141_4610752                        5842  81 +     35603 ------------------------------------------------------------gttcataac---------ttacactcc----taaaac--aaa--a---gacaga---ttaacaagagaaagacataca--tgt-tt-----att-----------------------------t-------------attgcaag------ttttacatg-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Leontocebus_nigricollis.k141_4610752                   I 22 I 49
s Leontopithecus_chrysomelas.k141_1519602                    27247 179 +     38576 ---T---TAG--A--G-----AC---TGT-TTT----CCCCTCTTGTT------GTCa-ggttcataac---------ttagactcc----taaaac--aaa--a---gacaga---tgaacaagagaaagacataca--cgt-tc-----att-----------------------------t-------------attgcaag------ttttacatgatgtgaaga--ccta------------------------------a----ca-a---------------aacaggaaaccct--------gtg--------a--------------at-t--t-tta--tgctgaagtt-gtaa---agaagggtgt-----------------a--------gc
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         23944 179 +     66356 ---T---TAG--A--G-----AC---TGT-TTT----CCCCTCTTGTT------GTCa-ggttcataac---------ttagactcc----taaaac--aaa--a---gacaga---tgaacaagagaaagacataca--cgt-tc-----att-----------------------------t-------------attgcaag------ttttacatgatgtgaaga--ccta------------------------------a----ca-a---------------aacaggaaaccct--------gtg--------a--------------at-t--t-tta--tgctgaagtt-gtaa---agaagggtgt-----------------a--------gc
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                          9876 124 -     23766 -------------------------------------------------------------------------------------------------------------------------------aaaagcatgca--aat-gt-----att-----------------------------t-------------aatataaa------ttttacatgacacagagc--cttcagaa---------------gtaaaaacccct----ca-a---------------aatcgaaaaacct--------gga--------t--------------at-t--t-ttg--tgcgaagtttgagaa---agaagtggat-----------------g----gtt-gt
i Lepilemur_ankaranensis.k141_596936                     I 122 C 0
s Lepilemur_dorsalis.k141_577674                             27942 124 +     45836 -------------------------------------------------------------------------------------------------------------------------------aaaagcatgca--aat-gt-----att-----------------------------t-------------aatataaa------ttttacatgacacggagc--cttcagaa---------------gtaaaaacccct----ca-a---------------aatcgaaaaacct--------gga--------t--------------at-t--t-ttg--tgcgaagtttgagaa---agaagtggat-----------------g----gtt-gt
i Lepilemur_dorsalis.k141_577674                         I 122 C 0
s Lepilemur_ruficaudatus.k141_121139                           414 197 +     25010 ---------------a-----ct---t-c-ttt----tctcacccctc------gata-ggttcatggc---------taagaccca----tgaaac--aaaagaaaagacaga---tgaacaaaagaaaagcatgca--aat-tg-----att-----------------------------t-------------aatataaa------ttttacatgacacggagc--cttcagaa---------------gtaaaaacccct----ca-a---------------aatcgaaaaacct--------gga--------t--------------at-t--t-ttg--tgctaagtttgagaa---agaagtggat-----------------g----gtt-gt
i Lepilemur_ruficaudatus.k141_121139                     I 69 C 0
s Lepilemur_septentrionalis.k141_185316                      25878 124 +     54090 -------------------------------------------------------------------------------------------------------------------------------aaaagcatgca--aat-gt-----att-----------------------------t-------------aatataaa------ttttacatgacacggagc--cttcagaa---------------gtaaaaacccct----ca-a---------------aatcgaaaaacct--------gga--------t--------------at-t--t-ttg--tgcgaagtttgagaa---agaagtggat-----------------g----gtt-gt
i Lepilemur_septentrionalis.k141_185316                  I 122 C 0
s Lepus_americanus.LepAme_scaffold_107385                     4764 215 -     14121 -------ggaaagaga-----gt---t-c-ctt----cgtcacccact------gcta-ggtttatgac---------tgagaccca----caaagc--aaa--a---gaca-aga-tgaacagggggaaagcata--ggaag-tc-----att-----------------------------t-------------a------acataagttttacaggacactgagt--attcagaa---------------gtgaagagtcaa----ag-a---------------aaaagagaagcct--------gca--------t--------------at-t--t--ga--ctctaagtttgatga---ggaaggg---ggtagctgtggagatgtga----ttaga
i Lepus_americanus.LepAme_scaffold_107385                I 50 C 0
s Lophocebus_aterrimus.ctg367                              1435268 196 +   1826925 GA-T---AAG--g--a-----tt---tt--ttt----cctctttcgtt------gtta-ggttcataac---------tgagagtac----taaaac--aaa--a---gacaga---ctaacgaccgaaaggcataca--cat-tt-----att-----------------------------t-------------aatacaag------ttatacataacctgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacat--------gtg--------t--------------at-t--t-tta--tgcagaatttggcga---agaagtgtat-----------------a--------gg
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            4260  38 +     11245 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ga--------c--------------a--t--t-tta--tgct--gtttaataa---agaactagat-----------------a----gtt-ac
i Loris_lydekkerianus.k141_2539221                       I 50 C 0
s Loris_tardigradus.ctg83                                  1003099  52 +   6120653 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ga--------catataaacatgcata--t--t-tta--tgct--gtttaataa---agaactagat-----------------a----gtt-ac
i Loris_tardigradus.ctg83                                I 50 C 0
s Macaca_arctoides.k141_2326796                               5083 196 +     40492 GA-T---AAG--G--A-----TT---TG--ttt----cctctttcgtt------gtta-ggttcataac---------tgagagtac----taaaac--aaa--a---gacaga---ctaacgacagaaaggcataca--cgt-tt-----att-----------------------------t-------------aatacaag------ttatacagaacgtgaaga--cctcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcaaaatttggcga---agaagtgtat-----------------a--------gg
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59674345 196 +  60120075 GA-T---AAG--G--A-----TT---TG--ttt----cctctttcgtt------gtta-ggttcataac---------tgagagtac----taaaac--aaa--a---gacaga---ctaacgaccgaaaggcataca--cgt-tt-----att-----------------------------t-------------aatacaag------ttatacagaacgtgaaga--cctcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------gg
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 10839 196 -     26193 GA-T---AAG--G--A-----TT---TG--TTT----CCTCTTTCGTT------GTTa-ggttcataac---------tgagagtac----taaaac--aaa--a---gacaga---ctaacaaccgaaaggcataca--cat-tt-----att-----------------------------t-------------aatacaag------ttatacagaacgtgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------gacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcaaaatttggcga---agaagtgtat-----------------a--------gg
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            78643 196 -    114318 GA-T---AAG--G--A-----TT---TG--ttt----cctctttcgtt------gtta-ggttcataac---------tgagagtac----taaaac--aaa--a---gacaga---ctaacgaccgaaaggcataca--cgt-tt-----att-----------------------------t-------------aatacaag------ttatacagaacgtgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcaaaatttggcga---agaagtgtat-----------------a--------gg
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  4342 196 -     23192 GA-T---AAG--G--A-----TT---TG--ttt----cctctttcgtt------gtta-ggttcataac---------tgagagtac----taaaac--aaa--a---gacaga---ctaacgaccgaaaggcataca--cat-tt-----att-----------------------------t-------------aatacaag------ttatacagaacgtgaaga--cttcagaa---------------gcgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcaaaatttggcga---agaagtgtat-----------------a--------gg
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                13897 101 -     29190 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------aatacaag------ttatacagaacgtgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcaaaatttggcga---agaagtgtat-----------------a--------gg
i Macaca_leonina.k141_3550399                            I 94 C 0
s Macaca_maura.k141_2733130                                  22463 101 +     37952 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------aatacaag------ttatacagaacgtgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcaaaatttggcga---agaagtgtat-----------------a--------gg
i Macaca_maura.k141_2733130                              I 94 C 0
s Macaca_mulatta.NC_041758.1                             186837458 196 + 187317192 GA-T---AAG--G--A-----TT---TG--TTT----CCTCTTTCGTT------GTTA-GGTTCATAAC---------TGAGAGTAC----TAAAAC--AAA--A---GA---CAGACTAACAACCGaaaggcataca--cat-tt-----att-----------------------------t-------------aatacaag------TTATACAGAACGTGAAGA--CTTCAGAA---------------GTGAAGGcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcAAAATTTGGCGA---AGAAGTGTAT-----------------A--------GG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25456114 101 -  25927173 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------aataCAAG------TTATACAGAACGTGAAGA--CTTCAGAA---------------GTGAAGGcctaa----ca-a---------------aacagaaaaacat--------gtg--------t--------------at-t--t-tta--tgcAAAATTTGGCGA---AGAAGTGTAT-----------------A--------GG
i Macaca_nemestrina.KQ007038.1                           I 94 C 0
s Macaca_nigra.k141_1655396                                  78313 101 +     89720 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------aatacaag------ttatacagaacgtgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcaaaatttggcga---agaagtgtat-----------------a--------gg
i Macaca_nigra.k141_1655396                              I 94 C 0
s Macaca_radiata.k141_3680011                                 5216 196 +     20474 GA-T---AAG--G--A-----TT---TG--ttt----cctctttcgtt------gtta-ggttcataac---------tgagagtac----taaaac--aaa--a---gacaga---ctaacgacagaaaggcataca--cgt-tt-----att-----------------------------t-------------aatacaag------ttatacagaacgtgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------gacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcaaaatttggcga---agaagtgtat-----------------a--------gg
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   5111 101 -     14993 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------aatacaag------ttatacagaacgtgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--cgcaaaatttggcga---agaagtgtat-----------------a--------gg
i Macaca_siberu.k141_635500                              I 94 C 0
s Macaca_silenus.Contig273                                  327982 101 -    668171 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------aatacaag------ttatacagaacgtgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcaaaatttggcga---agaagtgtat-----------------a--------gg
i Macaca_silenus.Contig273                               I 94 C 0
s Macaca_thibetana.k99_256239                                 3328 196 -     24072 GA-T---AAG--G--A-----TT---TG--ttt----cctctttcgtt------gtta-ggttcataac---------tgagagtac----taaaac--aaa--a---gacaga---ctaacgaccgaaaggcataca--cgt-tt-----att-----------------------------t-------------aatacaag------ttatacagaacgtgaaga--cctcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcaaaatttggcga---agaagtgtat-----------------a--------gg
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               24051 101 -     45290 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------aatacaag------ttatacagaacgtgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--cgcaaaatttggcga---agaagtgtat-----------------a--------gg
i Macaca_tonkeana.k141_1498238                           I 94 C 0
s Mandrillus_leucophaeus.scaffold280                      23935541 196 -  24302211 GA-T---AAG--G--A-----TT---Tt--ttt----cctcttttgtt------gtta-ggttcataac---------tgagagcac----taaaac--aaa--a---gacaga---ctaacgaccgaaaggcataca--cat-tt-----att-----------------------------t-------------aatacaag------ttacacagaacgtgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcagaatttggcga---agaagtgtat-----------------a--------gg
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               349673 196 +    752769 GA-T---AAG--g--a-----tt---tt--ttt----cctctttcgtt------gtta-ggttcataac---------tgagagtac----taaaac--aaa--a---gacaga---ctaacgaccgaaaggcataca--cat-tt-----att-----------------------------t-------------aatacaag------ttacacagaacgtgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcagaatttggcga---agaagtgtat-----------------a--------gg
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33101034 160 -  40650429 ag-a---aaa--g--a-----tc---t---ttt----tctca------cccattgctg-agttcatggc---------tgaga------ctcataccacaaa--a---gacagataa---ataagacaaaagcaaacg--aac-tt-----gtttaatat-----------------------a-------------a------g------ttttacataacaggaagc--ctgcagaa---------------ttaaagattcaa----ag-a---------------aatgtggaaatta--------tca--------t-----------------------------------------------------------------------------------
i Marmota_marmota.CZRN01000018.1                         I 66 I 37
s Mico_argentatus.k141_1239457                                3992 195 -      7380 ---T---TAG--A--G-----AT---TGT-TTT----CCCCTCTTGTT------GTCa-ggttcataac---------ttagattcc----taaaaa--aaa--a---gacaga---ttaacaagagaaaggcataca--cat-tc-----att-----------------------------t-------------attgcaag------ttttacatgatgtgaaga--cttt------------------------------g----ca-agtgaagacctaacagaacaggaaaccct--------gtg--------c--------------at-t--t-tta--tgctaaagttggtaa---tgaagggtgt-----------------a--------gc
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               3065 195 +     18990 ---T---TAG--A--G-----AT---TGT-TTT----CCCCTCTTGTT------GTCa-ggttcataac---------ttagattcc----taaaaa--aaa--a---gacaga---ttaacaagagaaaggcataca--cat-tc-----att-----------------------------t-------------attgcaag------ttttacatgatgtgaaga--cttt------------------------------g----ca-agtgaagacctaacagaacaggaaaccct--------gtg--------c--------------at-t--t-tta--tgctaaagttggtaa---tgaagggtgt-----------------a--------gc
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      4004 195 -      7356 ---T---TAG--A--G-----AT---TGT-TTT----CCCCTCTTGTT------GTCa-ggttcataac---------ttagattcc----taaaaa--aaa--a---gacaga---ttaacaagagaaaggcataca--cat-tc-----att-----------------------------t-------------attgcaag------ttttacatgatgtgaaga--cttt------------------------------g----ca-agtgaagacctaacagaacaggaaaccct--------gtg--------c--------------at-t--t-tta--tgctaaagttggtaa---tgaagggtgt-----------------a--------gc
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18290333 197 -  93316391 ---------------A-----CT---T-C-TTT----TCTCACCCCTC------AATA-GATTCATGGC---------TAAGAccca----taaaac--aaaagaaaagataca---tgagcaaaagaaaagcataca--cat-tt-----att-----------------------------t-------------aatataaa------ttttacatgacACGGAGC--CTTCAGAC---------------ATGAAAACCCCT----CA-A---------------AATAGAGAAACCT--------GCA--------T--------------AT-T--T-TTG--TGTTAAGTTTGAGAA---AGAAGTGGAT-----------------A----GTT-GC
i Microcebus_murinus.CM007674.1                          I 71 C 0
s Miopithecus_ogouensis.k141_534055                           7265 197 -     28506 GA-T---AAG--G--A-----TT---TGt-ttt----cctctttcgtt------gtta-ggttcataac---------tgagagtac----taaaac--aaa--a---ggcaga---ttaacgaccaaaaggcataca--cat-tt-----att-----------------------------c-------------aatacaag------ttatacataacatgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------gg
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirza_zaza.k141_952172                                      7885 196 -     37649 ---------------a-----ct---t-c-ttt----tctcacccctc------agta-ggttcatggc---------aaagaccca----taaaac--aaaagaaaagac-g---gtgaacaaaagaaaagcataca--aat-tt-----att-----------------------------t-------------aatataaa------ttttacatgacacagagc--cttcagac---------------atgaaaacccct----ca-a---------------aatagggaaacct--------gca--------t--------------at-t--t-ctg--tgctaagtttgagaa---agaagtggat-----------------a----gtt-gc
i Mirza_zaza.k141_952172                                 I 70 C 0
s Nasalis_larvatus.k141_413338                               13260 197 +     21681 GA-T---AAG--G--A-----TT---TGT-ttt----cctctttcgtt------gtca-ggttcatgac---------tgagagtat----taaaac--aaa--a---gacaga---ttaacgaccgaaaggcataca--cat-tt-----att-----------------------------t-------------aatacaag------ttatacataacgtgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------gt
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nycticebus_bengalensis.LG01                            102578290  41 - 196305487 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ca--------t--------------at-t--t-tta--tgctaagtttgataa---agaactagat-----------------aa----tt-ac
i Nycticebus_bengalensis.LG01                            I 47 C 0
s Nycticebus_coucang.k141_771082                               135  41 -      2667 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ca--------t--------------at-t--t-tta--tgctaagtttgataa---agaactagat-----------------aa----tt-ac
i Nycticebus_coucang.k141_771082                         I 47 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105748711  41 + 199412804 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ca--------t--------------at-t--t-tta--tgctaagtttgataa---agaactagat-----------------aa----tt-ac
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 47 C 0
s Ochotona_princeps.JH802162.1                             1361888 190 +   3988456 -------GGA--G--A-----GT---T-T-CTT----TGTCACTCATT------ACTG-GCTTCATGAA---------CGAGAACCC-C---AAAAC--AAA--A---GA---CAGGTGAAGAGCAGAAAAATATA----AAC-TC-----AAT-----------------------------T-------------C------A------TTTTATATGTCATTGAGT--GTTCAGAA-------------CCATGAAGAACCAA----AGTG---------------AAAAAGGAAACCT--------GCA--------G--------------AG-TTTT--TA--TGCTAAGTGTGACAA---GGGAGTA--------------------G--A-TTA-GA
i Ochotona_princeps.JH802162.1                           I 98 I 6
s Oryctolagus_cuniculus.CM000791.1                        67145610 213 + 174332312 -------GGAAAG--A-----GT---T-C-CTT----CGTCACCCACT------GCTA-GGTTTATGAC---------TGAGACCCC-C---AAAGc--aaa--a---gaca-aga-tgaacaggggaaaagcata--ggaag-tc-----gtt-----------------------------t-------------a------acacaagttttacaggacactgagt--cttcagaa---------------gtgaagagtcaa----ag-a---------------AAAAGGGAAGCCT--------GCA--------T--------------AA-T--T--GA--CTCTAAGTTTGATGA---GGAAGCG---GGTAGCTGTGGAGATGTG--A-TTA-GA
i Oryctolagus_cuniculus.CM000791.1                       I 50 C 0
s Otolemur_crassicaudatus.k141_222918                         2565  94 +      8798 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ctaaa------ttttaca-------gggc--ctttaaga---------------ctgaaaatacct----ct-g---------------aacagggaaacag--------cca--------t--------------at-t--t-tta--tgctaagtttgataa---agaattagat-----------------a----gtt-ac
i Otolemur_crassicaudatus.k141_222918                    I 145 C 0
s Otolemur_garnettii.GL873799.1                             694730  94 -   1103335 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAAA------TTTTACA-------GGGC--CTTTAAGA---------------GTGAAAATACCT----CC-G---------------AACAGGGAAACAG--------CCA--------T--------------AT-T--T-TTA--TGCTAAGTTTGATAA---AGAATTAGAT-----------------A----Gtt-ac
i Otolemur_garnettii.GL873799.1                          I 145 C 0
s Pan_paniscus.KQ411613.1                                    42202 191 +     80009 GA-T---AAg--g--a-----tt---tgt-ttt----cctctttcatt------gTTA--GTTCATAAC---------TGAGAGTCG-----AAAAC--aaa--a---ga-------ttaacaagagaaaggcataca--tat-tt-----att-----------------------------t-------------aacacaaG------TTATACATAACGTGAAGA--CTTCACAA---------------GTGAAGGCCTAA----CA-A---------------AACAGCAaaacct--------gtg--------t--------------at-t--t-tta--tgctaaatTTGGTGA---AGAAGTGTAT-----------------A--------GT
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189141113 192 + 189151597 GA-T---AAg--g--a-----tt---tgt-ttt----cctctttcatt------gTTA-GGTTCATAAC---------TGAGAGTCG-----AAAAC--aaa--a---ga-------ttaacaagagaaaggcataca--tat-tt-----att-----------------------------t-------------aacacaAG------TTATACATAACGTGAAGA--CTTCACAA---------------GTGAAGGCCTAA----CA-A---------------AACAGCAaaacct--------gtg--------t--------------at-t--t-tta--tgctaaatTTGGTGA---AGAAGTGTAT-----------------A--------GT
i Pan_troglodytes.CM009242.2                             I 62 C 0
s Papio_anubis.CM001495.2                                183441295 196 + 183742232 GA-t---aag--g--a-----tt---tt--ttt----cctctttcgtT------GTTA-GGTTCATAAC---------TGAGAGTAC----TAAAAC--AAA--A---GA---CAGACTAACGACCGaaaggcataca--cat-tt-----att-----------------------------t-------------aatacaag------TTATACATAACCTGAAGA--CTTCAGAA---------------GTGAAGGcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcAGAATTTGGCGA---AGAAGTGTAT-----------------A--------GG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             4989 196 +     20448 GA-T---AAG--g--a-----tt---tt--ttt----cctctttcgtt------gtta-ggttcataac---------tgagagtac----taaaac--aaa--a---gacaga---ctaacgaccgaaaggcataca--cat-tt-----att-----------------------------t-------------aatacaag------ttatacataacctgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcagaatttggcga---agaagtgtat-----------------a--------gg
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20561797 196 +  20919399 GA-T---AAG--g--a-----tt---tt--ttt----cctctttcgtt------gtta-ggttcataac---------tgagagtac----taaaac--aaa--a---gacaga---ctaacgaccgaaaggcataca--cat-tt-----att-----------------------------t-------------aatacaag------ttatacataacctgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcagaatttggcga---agaagtgtat-----------------a--------gg
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   3733 196 +     41871 GA-T---AAG--g--a-----tt---tt--ttt----cctctttcgtt------gtta-ggttcataac---------tgagagtac----taaaac--aaa--a---gacaga---ctaacgaccgaaaggcataca--cat-tt-----att-----------------------------t-------------aatacaag------ttatacataacctgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcagaatttggcga---agaagtgtat-----------------a--------gg
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     7018 196 +     27711 GA-T---AAG--g--a-----tt---tt--ttt----cctctttcgtt------gtta-ggttcataac---------tgagagtac----taaaac--aaa--a---gacaga---ctaacgaccgaaaggcataca--cat-tt-----att-----------------------------t-------------aatacaag------ttatacataacctgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcagaatttggcga---agaagtgtat-----------------a--------gg
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  7098 196 +      9205 GA-T---AAG--g--a-----tt---tt--ttt----cctctttcgtt------gtta-ggttcataac---------tgagagtac----taaaac--aaa--a---gacaga---ctaacgaccgaaaggcataca--cat-tt-----att-----------------------------t-------------aatacaag------ttatacataacctgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcagaatttggcga---agaagtgtat-----------------a--------gg
i Papio_ursinus.k141_3428135                             C 0 C 0
s Perodicticus_ibeanus.k141_855320                            8714  86 +     13100 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ataaa------ttttt-----------------tcaaga---------------gttaaaacagct----ca-g---------------aacatggaaacat--------gca--------t--------------at-g--t-tta--tgctaagtttgatac---agaactagat-----------------a----gtt-ac
i Perodicticus_ibeanus.k141_855320                       I 149 C 0
s Perodicticus_potto.k141_1092580                             7116  86 +     25941 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ataaa------tttct-----------------tcaaga---------------gttaaaacagct----ca-g---------------aacatggaaacat--------gca--------t--------------at-g--t-tta--tgctaagtttgatac---agaactagat-----------------a----gtt-ac
i Perodicticus_potto.k141_1092580                        I 149 C 0
s Piliocolobus_badius.k141_1234363                           41757 197 +     62158 AA-T---AAG--G--A-----TC---TGt-ttt----cctctttcgtt------gtta-ggttcgtaac---------tgagagtac----taaaac--aaa--a---gacaga---ttaacgaccgaaaggcgtaca--cat-tt-----att-----------------------------t-------------aatacaag------ttagacataacgtgaaga--cttcagaa---------------gtgaaggcctaa----ca-g---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------gt
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        36488 197 +     89929 AA-T---AAG--G--A-----TC---TGt-ttt----cctctttcgtt------gtta-ggttaataac---------tgagagtac----taaaac--aaa--a---gacaga---ttaacgaccgaaaggcgtaca--cat-tt-----att-----------------------------t-------------aatacaag------ttagacataacgtgaaga--cttcagaa---------------gtgaaggcctaa----ca-g---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------gt
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            37904 197 +     51399 AA-T---AAG--G--A-----TC---TGt-ttt----cctctttcgtt------gtta-ggttaataac---------tgagagtac----taaaac--aaa--a---gacaga---ttaacgaccgaaaggcgtaca--cat-tt-----att-----------------------------t-------------aatacaag------ttagacataacgtgaaga--cttcagaa---------------gtgaaggcctaa----ca-g---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------gt
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14294142 197 -  14605196 AA-T---AAG--G--A-----tc---tgt-ttt----cctctttcatt------GTTA-GGTTAGTAAC---------TGAGAGTAc----taaaac--aaa--a---gacaga---ttaacgaCCGAAAGGcgtaca--cat-tt-----att-----------------------------t-------------aatacaag------TTATACATAACGTGAAGA--CTTCAGAA---------------GTGAAGGCCTAA----CA-G---------------AACAGAAAAACCT--------GTG--------T--------------AT-T--T-TTA--TGCAAAATTTGGTGA---AGAAGTGTAT-----------------A--------GT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189153851 193 + 189387572 GA-T---AAG--g--a-----tt---tgt-ttt----cctctttcatt------GTTA-GGTTCGTAAC---------TGAGAGTCA----TAAAAC--aaa--a---ga-------ttaacaagagaaaggcataca--cat-tt-----att-----------------------------t-------------aacacaAG------TTATACATAACGTGAAGA--CTTCACAA---------------GTGAAGGcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcaAAATTTGGTGA---AGAAGTGTAT-----------------A--------GT
i Pongo_abelii.CM009266.2                                I 24608 T 24608
s Pongo_pygmaeus.ctg66                                     9568851 193 +   9816681 GA-T---AAG--G--A-----TT---TGT-ttt----cctctttcatt------gtta-ggttcgtaac---------tgagagtca----taaaac--aaa--a---ga-------ttaacaagagaaaggcataca--cat-tt-----att-----------------------------t-------------aacacaag------ttatacataacatgaaga--cttcacaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------gt
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               71428 197 -     81375 GA-T---AAG--G--A-----TT---TGT-ttt----cctcttctgtt------gtca-ggttcatgac---------tgagagtac----taaagc--aaa--a---gacaga---tgaacgaccgaaaggcataca--cat-tt-----att-----------------------------t-------------aatacaag------ttatacataacgtgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcaaaatttggtga---agaagtgtag-----------------a--------gt
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              3248 197 +     19060 GA-T---AAG--G--A-----TT---TGT-TTT----CCTCTTCTGTT------GTCa-ggttcatgac---------tgagagtac----taaagc--aaa--a---gacaga---tgaacgaccgaaaggcataca--cat-tt-----att-----------------------------t-------------aatacaag------ttatacataacgtgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcaaaatttggtga---agaagtgtag-----------------a--------gt
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2595594 197 -   4620579 ---------------A-----CT---T-C-TTT----TCTCACCCCTC------GATA-GGTTCATGGC---------TAAGAccca----taaaac--aaaagaaaagacaga---tgaacaaaagaaaagcataca--aat-tt-----att-----------------------------t-------------aatataaa------ttttacatgatTCAGAGC--CTTCAGAA---------------GTGAAAACCCTT----CA-A---------------AATAGGGAAATCT--------GCA--------T--------------AT-T--T-TTG--TGCTAAGTTTGAGAA---AGAAGTGGAT-----------------A----GTT-GT
i Prolemur_simus.MPIZ01000396.1                          I 70 C 0
s Propithecus_coquerelli.NW_012148875.1                     989578 197 +   2598838 ---------------A-----CT---T-C-TTT----CCTCACCCCTC------GATA-GGTTCATGGC---------TAAGAccca----taaaac--aaaagaaaagacaga---tgaacaaaggaaaagcataca--aat-tt-----att-----------------------------t-------------aatataaa------ttttacatggCACGGAGC--CTTCAGAA---------------GTGAAAACCCCT----CA-A---------------AATAGGGAAACCT--------GCA--------T--------------AT-T--T-TTC--TGCTAAGTCTGAGAA---AGAAGTGGAT-----------------A----GTC-GT
i Propithecus_coquerelli.NW_012148875.1                  I 70 C 0
s Propithecus_coronatus.k141_347390                          27888 197 +     38485 ---------------a-----ct---t-c-ttt----cctcacccctc------gata-ggttcatggc---------taagaccca----taaaac--aaaagaaaagacaga---tgaacaaaggaaaagcataca--aat-tt-----att-----------------------------t-------------aatataaa------ttttacatggcacggagc--cttcagaa---------------gtgaaaacccct----ca-a---------------aatagggaaacct--------gca--------t--------------at-t--t-ttc--tgctaagtctgagaa---agaagtggat-----------------a----gtc-gt
i Propithecus_coronatus.k141_347390                      I 70 C 0
s Propithecus_diadema.k141_357118                             4048 197 +      4256 ---------------a-----ct---t-c-ttt----cctcacccctc------gata-ggttcatggc---------taagaccca----taaaac--aaaagaaaagacaga---tgaacaaaggaaaagcataca--aat-tt-----att-----------------------------t-------------aatataaa------ttttacacggcacggagc--cttcagaa---------------gtgaaaacccct----ca-a---------------aatagggaaacct--------gca--------t--------------at-t--t-ttc--tgctaagtctgagaa---agaagtggat-----------------a----gtc-gt
i Propithecus_diadema.k141_357118                        I 70 C 0
s Propithecus_edwardsi.k141_1176054                          25401 197 +     35766 ---------------a-----ct---t-c-ttt----cctcacccctc------gata-ggttcatggc---------taagaccca----taaaac--aaaagaaaagacaga---tgaacaaaggaaaagcataca--aat-tt-----att-----------------------------t-------------aatataaa------ttttacacggcacggagc--cttcagaa---------------gtgaaaacccct----ca-a---------------aatagggaaacct--------gca--------t--------------at-t--t-ttc--tgctaagtctgagaa---agaagtggat-----------------a----gtc-gt
i Propithecus_edwardsi.k141_1176054                      I 70 C 0
s Propithecus_perrieri.k141_1200571                           3583 197 -     24134 ---------------a-----ct---t-t-ttt----cctcacccctc------gata-ggttcatggc---------taagaccca----taaaac--aaaagaaaagacaga---tgaacaaaggaaaagcataca--aat-tt-----att-----------------------------t-------------aatataaa------ttttacacagaacagagc--cttcagaa---------------gtgaaaacccct----ca-a---------------aatagggaaacct--------gca--------t--------------at-t--t-ttc--tgctaagtctgagaa---agaagtggat-----------------a----gtc-gt
i Propithecus_perrieri.k141_1200571                      I 70 C 0
s Propithecus_tattersalli.k141_790011                        27405 197 -     67325 ---------------a-----ct---t-c-ttt----cctcacccctc------gata-ggttcatggc---------taagaccca----taaaac--aaaagaaaagacaga---tgaacaaaggaaaagcataca--aat-tt-----att-----------------------------t-------------aatataaa------ttttacatggcacggagc--cttcagaa---------------gtgaaaacccct----ca-a---------------aatagggaaatct--------gca--------t--------------at-t--t-ttc--tgctaagtctgagaa---agaagtggat-----------------aa----tc-gt
i Propithecus_tattersalli.k141_790011                    I 70 C 0
s Propithecus_verreauxi.k141_956661                           3641 197 -      6182 ---------------a-----ct---t-c-ttt----cctcacccctc------gata-ggttcatggc---------taagaccca----taaaac--aaaagaaaagacaga---tgaacaaaggaaaagcataca--aat-tt-----att-----------------------------t-------------aatataaa------ttttacatggcacggagc--cttcagaa---------------gtgaaaacccct----ca-a---------------aatagggaaacct--------gca--------t--------------at-t--t-ttc--tgctaagtctgagaa---agaagtggat-----------------a----gtc-gt
i Propithecus_verreauxi.k141_956661                      I 70 C 0
s Pygathrix_cinerea.k141_1153803                             13259 197 -     91421 GA-T---AAG--G--A-----TT---TGT-ttt----cctctttcgtt------gtca-ggttcgtgac---------tgagagtac----taaaac--aaa--a---gacaga---ttaacgaccgaaaggcataca--cat-tt-----att-----------------------------t-------------aatacaag------ttatacataacgtgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------gt
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7607385 197 +   7812017 GA-T---AAG--G--A-----TT---TGT-ttt----cctctttcgtt------gtca-ggttcgtgac---------tgagagtac----taaaac--aaa--a---gacaga---ttaacgactgaaaggcataca--cat-tt-----att-----------------------------t-------------aatacaag------ttatacataacgtgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------gt
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             13233 197 -     72585 GA-T---AAG--G--A-----TT---TGT-ttt----cctctttcgtt------gtca-ggttcgtgac---------tgagagtac----taaaac--aaa--a---gacaga---ttaacgaccgaaaggcataca--cat-tt-----att-----------------------------t-------------aatacaag------ttatacataacgtgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------gt
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             4940 205 -     11128 GA-T---AAG--G--A-----TT---TGT-ttt----cctctttcgtt------gtca-ggttcatgac---------tgagagtac----taaaac--aaa--a---ga-------ttaacgaccgaaaggcataca--cat-tt-----att-----------------------------t-------------aatacaag------ttatacataacgtgaaga--cttcagaa---------------gtgaag-tctaatatcca-a---------------aatattagtctcc--------atgactaatatt--------------gtat--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------gt
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91234296 209 - 195417433 GA-T---AAg--g--a-----tt---tgt-ttt----cctctttcgTT------GTCA-GGTTCATGAC---------TGAGAGTAc----taaaac--aaa--a---gacaga---ttaacgaccgaaaggcataca--cat-tt-----att-----------------------------t-------------aatacaag------TTATACATAACGTGAAGA--CTTCAGAA---------------GTGaag-tctaatatcca-a---------------aatattagtCTCC--------ATgactaatatt--------------gtat--t-tta--tgcAAAATTTGGTGA---AGAAGTGTAT-----------------A--------GT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7669945 205 +   7961872 GA-T---AAG--G--A-----TT---TGT-ttt----cctctttcgtt------gtca-ggttcatgac---------tgagagtac----taaaac--aaa--a---ga-------ttaacgaccgaaaggcataca--cat-tt-----att-----------------------------t-------------aatacaag------ttatacataacgtgaaga--cttcagaa---------------gtgaag-tctaatatcca-a---------------aatattagtctcc--------atgactaatatt--------------gtat--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------gt
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_2619299                               6496  81 -      8359 ------------------------------------------------------------gttcataac---------ttacgctcc----taaaac--aaa--a---gacaga---ttaacaagagaaagacataca--cgt-tc-----att-----------------------------t-------------attgcaag------ttttacatg-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Saguinus_bicolor.k141_2619299                          I 22 I 49
s Saguinus_imperator.k141_2524406                              437  81 +      2197 ------------------------------------------------------------gttcataac---------ttacactcc----taaaac--aaa--a---gacaga---ttaacaagagaaagacatacg--tgt-tc-----att-----------------------------t-------------attgcaag------ttttacatg-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Saguinus_imperator.k141_2524406                        I 22 I 49
s Saguinus_inustus.k141_699149                               11859  81 +     13640 ------------------------------------------------------------gttcataac---------ttacactcc----taaaac--aaa--a---gacaga---ttaacaagagaaagacatacg--tgt-tc-----att-----------------------------t-------------attgcaag------ttttacatg-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Saguinus_inustus.k141_699149                           I 22 I 49
s Saguinus_labiatus.k141_285685                               6721  81 +      8564 ------------------------------------------------------------gttcataac---------ttacactcc----taaaac--aaa--a---gacaga---ttaacaagagaaagacatacg--tgt-tc-----att-----------------------------t-------------attgcaag------ttttacatg-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Saguinus_labiatus.k141_285685                          I 22 I 49
s Saguinus_midas.LG03                                    209467571  81 + 209938924 ------------------------------------------------------------gttcataac---------ttacgctcc----taaaac--aaa--a---gacaga---ttaacaagagaaagacataca--cgt-tc-----att-----------------------------t-------------attgcaag------ttttacatg-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Saguinus_midas.LG03                                    I 22 I 49
s Saguinus_mystax.k141_374627                                 6285  81 -      9399 ------------------------------------------------------------gttcataac---------ttacactcc----taaaac--aaa--a---gacaga---ttaacaagagaaagacatacg--tgt-tc-----att-----------------------------t-------------attgcaag------ttttacatg-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Saguinus_mystax.k141_374627                            I 22 I 49
s Saimiri_boliviensis.NW_024100920.1                     119949556 105 - 121099817 -------------------------------------------------------------------------------------------------------------------------------------------------------ATT-----------------------------T-------------ATTGCAAG------TTTTACATGGTGTGAAGA--CTTCACAA---------------GTGAAGAcctaa----ca-a---------------aacagaaaaccct--------gTG--------T--------------AT-T--T-TTA--CGCTAAATTTGGTAA---AGAAGTGTGT-----------------A--------GC
i Saimiri_boliviensis.NW_024100920.1                     I 81 C 0
s Saimiri_cassiquiarensis.k141_2188234                       22012 105 +     46362 -------------------------------------------------------------------------------------------------------------------------------------------------------att-----------------------------t-------------attgcaag------ttttacatggtgtgaaga--cttcacaa---------------gtgaagacctaa----ca-a---------------aacagaaaatcct--------gtg--------t--------------at-t--t-tta--cgctaaatttggtaa---agaagtgtgt-----------------a--------gc
i Saimiri_cassiquiarensis.k141_2188234                   I 81 C 0
s Saimiri_macrodon.k141_716185                               22107 105 +     45824 -------------------------------------------------------------------------------------------------------------------------------------------------------att-----------------------------t-------------attgcaag------ttttacatggtgtgaaga--cttcacaa---------------gtgaagacctaa----ca-a---------------aacagaaaaccct--------gtg--------t--------------at-t--t-tta--cgctaaatttggtaa---agaagtgtgt-----------------a--------gc
i Saimiri_macrodon.k141_716185                           I 81 C 0
s Saimiri_oerstedii.k141_1487881                             38735 105 -     64574 -------------------------------------------------------------------------------------------------------------------------------------------------------att-----------------------------t-------------attgcaag------ttttacatggtgtgaaga--cttcacaa---------------gtgaagacctaa----ca-a---------------aacagaaaaccct--------gtg--------t--------------at-t--t-tta--cgctaaatttggtaa---agaagtgtgt-----------------a--------gc
i Saimiri_oerstedii.k141_1487881                         I 81 C 0
s Saimiri_sciureus.k141_2278166                               1741 105 -     23631 -------------------------------------------------------------------------------------------------------------------------------------------------------att-----------------------------t-------------attgcaag------ttttacatggtgtgaaga--cttcacaa---------------gtgaagacctaa----ca-a---------------aacagaaaaccct--------gtg--------t--------------at-t--t-tta--cgctaaatttggtaa---agaagtgtgt-----------------a--------gc
i Saimiri_sciureus.k141_2278166                          I 81 C 0
s Saimiri_ustus.k141_1484609                                 22000 105 -     61129 -------------------------------------------------------------------------------------------------------------------------------------------------------att-----------------------------t-------------attgcaag------ttttacatggtgtgaaga--cttcacaa---------------gtgaagacctaa----ca-a---------------aacagaaaatcct--------gtg--------t--------------at-t--t-tta--cgctaaatttggtaa---agaagtgtgt-----------------a--------gc
i Saimiri_ustus.k141_1484609                             I 81 C 0
s Semnopithecus_entellus.k141_11662                          17765 197 -     19888 GA-T---AAG--G--A-----TT---TGT-ttt----cctctttcgtt------gtca-ggttcatgac---------tgagagtac----taaaac--aaa--a---gacaga---ttaacggccgaaaggcataca--cat-tt-----att-----------------------------t-------------aatacaag------ttatacataacgtgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------ttg--------t--------------gt-t--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------ct
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      24968 197 +     39453 GA-T---AAG--G--A-----TT---TGT-ttt----cctctttcgtt------gtca-ggttcatgac---------tgagagtac----taaaac--aaa--a---gacaga---ttaacggccgaaaggcataca--cat-tt-----att-----------------------------t-------------aatacaag------ttatacataacgtgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------gt-t--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------gt
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            5487 197 +     27826 GA-T---AAG--G--A-----TT---TGT-ttt----cctctttcgtt------gtca-ggttcatgac---------tgagagtac----taaaac--aaa--a---gacag---gttaacggccgaaaggcataca--cat-tt-----att-----------------------------t-------------aatacaag------ttatacataacgtgaaga--cttcagaa---------------ctgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------gt-t--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------ct
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             5007 197 -     19483 GA-T---AAG--G--A-----TT---TGT-ttt----cctctttcgtt------gtca-ggttcatgac---------tgagagtac----taaaac--aaa--a---gacaga---ttaacggccgaaaggcataca--cat-tt-----att-----------------------------t-------------aatacaag------ttatacataacgtgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------gt-t--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------gt
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      5076 197 +      7198 GA-T---AAG--G--A-----TT---TGT-ttt----cctctttcgtt------gtca-ggttcatgac---------tgagagtac----taaaac--aaa--a---gacaga---ttaacggccgaaaggcataca--cat-tt-----att-----------------------------t-------------aatacaag------ttatacataacgtgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------ttg--------t--------------gt-t--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------ct
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         13329 197 +     15514 GA-T---AAG--G--A-----TT---TGT-ttt----cctctttcgtt------gtca-ggttcatgac---------tgagagtac----taaaac--aaa--a---gacaga---ttaacggccgaaaggcataca--cat-tt-----att-----------------------------t-------------aatacaag------ttatacataacgtgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------gt-t--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------gt
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1951923 160 -   3870691 ag-a---aaa--g--a-----tc---t---ttt----tctca------cccattgctg-agttcatggc---------tgaga------ctcataccacaaa--a---gacagacaa---ataagacaaaagcataca--aac-tt-----gtttaatat-----------------------a-------------a------g------ttttacataacaggaagc--ctgcagaa---------------ttaaagattcac----ag-a---------------aatgtggaaatta--------tca--------t-----------------------------------------------------------------------------------
i Spermophilus_dauricus.KZ294078.1                       I 66 I 37
s Symphalangus_syndactylus.tarseq_199                      1091555 193 -   1523678 ga-t---aaa--g--a-----tt---tgt-ttt----cctctttcatt------gtta-ggttcgtaac---------tgagagtcg----taaaac--aaa--a---ga-------ttaacaagagaaaggcataca--cat-tt-----att-----------------------------t-------------aacacaag------ttatacataatgtgaaga--cttcacaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgctaaatttggtga---agaagtgtag-----------------a--------gt
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_wallacei.k141_2029956                               4350  84 +      4644 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAAGACCTCAGAA---------------GTGACCCTCCCA----CA-A---------------AAAAAGAAAGACT--------GCA--------T--------------AG-T--C-TTA--TGCTGAGCTTGATGA---TGAAGCCAAT-----------------G----TTT-GT
i Tarsius_wallacei.k141_2029956                          I 146 N 0
s Tarsius_lariang.k141_2201908                               24934  76 +     70052 gg-a---aga--g--a-----tt---t-c-ttt----tctcacccatc------gcta-gtttcatggc---------tgaggcacc----tataac--aaa--a---gacaga---tatacaagaga-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Tarsius_lariang.k141_2201908                           I 70 I 465
s Theropithecus_gelada.CM009954.1                        186426661 196 + 186847797 GA-t---aag--g--a-----tt---tt--ttt----cctctttcgtT------GTTA-GGTTCATAAC---------TGAGAGTAC----TAAAAC--AAA--A---GA---CAGACTAACGACCGaaaggcataca--cat-tt-----att-----------------------------t-------------aatacaag------TTATACATAACCTGAAGA--CTTCAGAA---------------GTGAAGGcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------at-t--t-tta--tgcAGAATTTGGCGA---AGAAGTGTAT-----------------A--------GG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          9059 197 -     20410 GA-T---ACG--G--A-----TT---TGT-ttt----cctctttcgtt------gtca-ggttcatgac---------tgagagtac----taaaac--aaa--a---gacaga---ttaacggccgaaaggcataca--cat-tt-----att-----------------------------t-------------aatacaag------ttatacataacgtgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------gt-t--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------gt
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    13256 196 +     15221 G--T---AAG--G--A-----TT---TGT-ttt----cctctttcgtt------gtca-ggttcatgac---------tgagagtac----taaaac--aaa--a---gacaga---ttaacggccgaaaggcataca--cat-tt-----att-----------------------------t-------------aatacaag------ttatacataacgtgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------gt-t--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------gt
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        9160 197 +     19930 GA-T---ACG--G--A-----TT---TGT-ttt----cctctttcgtt------gtca-ggttcatgac---------tgagagtac----taaaac--aaa--a---gacaga---ttaacggccgaaaggcataca--cat-tt-----att-----------------------------t-------------aatacaag------ttatacataacgtgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------gt-t--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------gt
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       5588 196 -     19997 G--T---AAG--G--A-----TT---TGT-ttt----cctctttcgtt------gtca-ggttcatgac---------tgagagtac----taaaac--aaa--a---gacaga---ttaacggccgaaaggcataca--cat-tt-----att-----------------------------t-------------aatacaag------ttatacataacgtgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------gt-t--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------gt
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            45718 195 -     60166 GA-T---AAG--G--A-----TT---TGT-ttt----cctctttcgtt------gtca-ggttcatgac---------tgagagtac----taaaac--aaa--a---gacaga---ttaacggccgaaaggcataca--cat-tt-----att-----------------------------t-------------aatacaag------ttatacataacgtgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aaca--aaaacct--------gtg--------t--------------gt-t--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------gt
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        13182 197 -     27529 GA-T---ACG--G--A-----TT---TGT-ttt----cctctttcgtt------gtca-ggttcatgac---------tgagagtac----taaaac--aaa--a---gacaga---ttaacggccgaaaggcataca--cat-tt-----att-----------------------------t-------------aatacaag------ttatacataacgtgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------gt-t--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------gt
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     13126 197 -     18194 G-AT---ACG--G--A-----TT---TGT-ttt----cctctttcgtt------gtca-ggttcatgac---------tgagagtac----taaaac--aaa--a---gacaga---ttaacggccgaaaggcataca--cat-tt-----att-----------------------------t-------------aatacaag------ttatacataacgtgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------gt-t--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------gt
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           6855 196 -     21137 G--T---AAG--G--A-----TT---TGT-ttt----cctctttcgtt------gtca-ggttcatgac---------tgagagtac----taaaac--aaa--a---gacaga---ttaacggccgaaaggcataca--cat-tt-----att-----------------------------t-------------aatacaag------ttatacataacgtgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------gt-t--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------gt
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    5558 196 -     10723 G--T---AAG--G--A-----TT---TGT-ttt----cctctttcgtt------gtca-ggttcatgac---------tgagagtac----taaaac--aaa--a---gacaga---ttaacggccgaaaggcataca--cat-tt-----att-----------------------------t-------------aatacaag------ttatacataacgtgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------gt-t--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------gt
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         4714 196 +      9834 G--T---AAG--G--A-----TT---TGT-ttt----cctctttcgtt------gtca-ggttcatgac---------tgagagtac----taaaac--aaa--a---gacaga---ttaacggccgaaaggcataca--cat-tt-----att-----------------------------t-------------aatacaag------ttatacataacgtgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------gt-t--t-ttg--tgcaaaatttggtga---agaagtgtat-----------------a--------gt
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        23027 196 +     32220 G--T---AAG--G--A-----TT---TGT-ttt----cctctttcgtt------gtca-ggttcatgac---------tgagagtac----taaaac--aaa--a---gacaga---ttaacggccgaaaggcataca--cat-tt-----att-----------------------------t-------------aatacaag------ttatacataatgtgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------gt-t--t-tta--tgcaaaatttggtga---agaaatgtat-----------------a--------gt
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5937129 196 +   6242583 G--T---AAG--G--A-----TT---TGT-ttt----cctctttcgtt------gtca-ggttcatgac---------tgagagtac----taaaac--aaa--a---gacaga---ttaacggccgaaaggcataca--cat-tt-----att-----------------------------t-------------aatacaag------ttatacataacgtgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aacagaaaaacct--------gtg--------t--------------gt-t--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------gt
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        6383 195 +     20839 ga-t---aag--c--a-----tt---tgt-ttt----cctctttcgtt------gtca-ggttcatgac---------tgagagtac----taaaac--aaa--a---gacaga---ttaacggccgaaaggcataca--cat-tt-----att-----------------------------t-------------aatacaag------ttatacataacgtgaaga--cttcagaa---------------gtgaaggcctaa----ca-a---------------aaca--aaaacct--------gtg--------t--------------gt-t--t-tta--tgcaaaatttggtga---agaagtgtat-----------------a--------gt
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2154518 101 +   4065304 --------------------------------------------------------------------------------------------------------a---gacag---gctaacaagggaaaagcaaaca--cat-tt-----att-----------------------------t-------------aata-aag------ttttatatgatacggaga--cttcagaa---------------gtggagatgcac----ag-a---------------atcagaagtctct--------gca--------------------------------------------------------------------------------------------
i Tupaia_chinensis.KB320699.1                            I 100 I 34
s Tupaia_tana.TupTan_flattened_line_97126                     8166 101 -     10553 --------------------------------------------------------------------------------------------------------a---gacaga---ctgacaagagaaaagcaaaca--cat-tt-----att-----------------------------t-------------aata-aag------ttttgtatgatacagaga--cttcggaa---------------gtggagacacac----ag-a---------------atcagaaatctct--------gca--------------------------------------------------------------------------------------------
i Tupaia_tana.TupTan_flattened_line_97126                I 100 I 34
s Varecia_rubra.k141_590885                                  10249 159 +     50397 ---------------a-----ct---t-c-ttt----tctcacccctc------aata-ggttcatggc---------taagaccca----taaagc--aaaagacaagataga---tgaacaaaagaaaagcctaca--aat-tt-----att-----------------------------t-------------aatgtaaa------ttttacatgacacggaga--cttcagaa---------------gtaaaaacccct----ca-a---------------aatagggaaacct--------gca--------t-----------------------------------------------------------------------------------
i Varecia_rubra.k141_590885                              I 70 I 38
s Varecia_variegata.k141_1128296                             10304 159 +     24756 ---------------a-----ct---t-c-ttt----tctcacccctc------aata-ggttcatggc---------taagaccca----taaagc--aaaagacaagataga---tgaacaaaagaaaagcctaca--aat-tt-----att-----------------------------t-------------aatgtaaa------ttttacatgacacggaga--cttcagaa---------------gtaaaaacccct----ca-a---------------aatagggaaacct--------gca--------t-----------------------------------------------------------------------------------
i Varecia_variegata.k141_1128296                         I 70 I 38
s Xerus_inauris.XerIna_scaffold_48378                        22872 181 -     24430 ag-a---aaa--g--a-----tc---t---ttt----tctca------cccattgttg-agttcatggc---------tgaga--------tataacacaaa--g---gaca--ta-ttaacaagacaaaagcataca--tat-at-----gtttaatataaacatgcgtagatgtttaatata-------------a------g------ttttacatgacaggaatt--ctgcagaa---------------ttaaagactcac----tg-a---------------aatgtggaaacta--------cca--------t-----------------------------------------------------------------------------------
i Xerus_inauris.XerIna_scaffold_48378                    I 66 I 35
s Zapus_hudsonius.ZapHud_scaffold_11398                      13320 143 +     63895 --------GA--A--C-----TT---T---CTT----GTACA------CCCATTGCTA-AGTCCCTGGG---------TGAGG----ACCCCTTAAG--Aaa--a---catag---ctgagcaagagaaaatcatgca--cgt-ct-----att-----------------------------taatat-tcctgtga------g------ttttgcgtgacatggagc--ctgcaGTG---------------GTGAGTCTTGGA----C--------------------------------------------------------------------------------------------------------------------------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 82 I 43
e Echinops_telfairi.JH980293.1                            48779651 164 + 111700974 I
e Sapajus_macrocephalus.k141_351809                          54316   0 -     80660 C
e Sapajus_apella.ctg103                                    5419275   0 -   5703754 C
e Chiropotes_albinasus.k141_2813271                           9356 381 +     11226 I
e Cebus_unicolor.k141_219506                                 14903   0 -     16904 I
e Cebus_albifrons.Contig27                                25650611   0 +  26074798 C
e Mus_pahari.LT608297.1                                   31353515 705 -  89631738 I
e Mus_spretus.CM004101.1                                  90750934 691 - 130317789 I
e Mus_musculus.chr8                                       87648857 707 - 129401213 I
e Mus_caroli.LT608237.1                                   84359872 692 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276   0 +     12536 C
e Zalophus_californianus.ZalCal_flattened_line_17732          4349  55 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                  9981  55 -     43706 I
e Vicugna_pacos.KN270157.1                                 5371064  55 -   5488506 I
e Ursus_maritimus.KK499267.1                               4849611  55 -   5085361 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52652   8 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584   0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641   0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     80101  76 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   3761   0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937   0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    386403  55 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      117950  55 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 71325 110 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                 9779  70 +     41958 I
e Sus_scrofa.CM000828.4                                    6809663  77 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629              17502  55 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             29916  55 +     97271 I
e Sorex_araneus.JH798187.1                                13649852  60 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               2947  55 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11304   0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152480   8 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                86981  55 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482  20 -   3329780 I
e Rattus_norvegicus.chr16                                 53568931 910 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968   0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20273487  55 -  38429054 I
e Pteropus_vampyrus.KN525825.1                             1359049  55 +   4952924 I
e Pteropus_alecto.KB030862.1                              22975963  55 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         39415  55 +     42204 I
e Pteronotus_parnellii.KE909381.1                            13855  81 -     21811 I
e Psammomys_obesus.NESX01036370.1                             9107 499 -     21651 I
e Procavia_capensis.ProCapCap_scaffold_85530                 11991 249 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090   0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             1020  56 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384   0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813   0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18193469 497 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690  60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11828  55 -     78924 I
e Pantholops_hodgsonii.KE114653.1                          1265385   0 -   2937107 C
e Panthera_tigris.KE722367.1                               4720208  55 -   8748460 I
e Panthera_pardus.KV860321.1                                263570  55 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  150365  55 +    230217 I
e Ovis_canadensis.OviCan_scaffold_2572                      174468   0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491   0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       461535  55 -    559221 I
e Orycteropus_afer.OryAfe_flattened_line_144387               9003  16 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345   0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    78850 497 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   23879 792 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229   0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831   4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              505841  55 -   2017862 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Nyctereutes_procyonoides.CAJHUB010000658.1               9148567  55 -   9404916 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183   0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422   0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20306159  54 +  31847680 I
e Nannospalax_galili.KL204047.1                            2025215 7823 -   3037898 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187970 110 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33185  55 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902629  55 -   4330536 I
e Myotis_davidii.KB100139.1                                1586559  55 -   6019432 I
e Myotis_brandtii.KE162005.1                                278865  55 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               300393  55 -  14710649 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           5693  55 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   34613  55 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379  13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 140540  53 -    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466   0 -    437263 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         4903  55 -      8324 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             33502  55 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1849825  55 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                14559  88 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    20898  16 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961   0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12180961 469 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 31477 495 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365              9216  54 +     13704 I
e Megaderma_lyra.MegLyr_scaffold_4542                         9519 4280 -    207569 I
e Manis_pentadactyla.KN006162.1                              50341   0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352   0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 89799  48 +     94391 I
e Lycaon_pictus.CM007581.1                                17954313  55 -  59628241 I
e Loxodonta_africana.GL010049.1                            4216156 234 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268344   0 -    662738 C
e Leptonychotes_weddellii.KB714746.1                       3042035  55 +   3914936 I
e Lasiurus_borealis.LasBor_scaffold_50988                    12479 3019 +     29960 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650   0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493   0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293   0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626   0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547   0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  43658  55 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42403  64 +     43066 I
e Hipposideros_armiger.JXIK01000431.1                       110974  61 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577   3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_384612                 297 328 -       958 I
e Heterocephalus_glaber.JH602082.1                        20660051   0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516   0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               241501  55 +    327341 I
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312   0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  8618   0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20195104   0 + 205367284 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689   0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752   0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Equus_przewalskii.KK951119.1                               32375  55 +    498745 I
e Equus_caballus.CM000403.2                               18530360  55 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1282539  55 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2144621  55 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16328499  55 -  41312741 I
e Ellobius_talpinus.LOJH01109367.1                            5126 789 -      6299 I
e Ellobius_lutescens.LOEQ01008920.1                          19045 777 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089466 1162 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347   0 +    607251 C
e Eidolon_helvum.KE759718.1                                   9707  55 +     11740 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175   0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084   0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    5228  56 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  672475  56 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8629030  76 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076   0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            62473   5 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923   0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569   0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             27664  55 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_37019               1802  50 -     19598 I
e Cricetulus_griseus.LT883664.1                           11666269 486 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 48834 457 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          13502  50 -     20389 I
e Condylura_cristata.JH655891.1                           17547413   8 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            172152 108 +    839153 I
e Choloepus_didactylus.ChoDid_scaffold_45914                 17052 108 +     19366 I
e Chinchilla_lanigera.JH722012.1                           1251498   0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_713168             206   0 -      2554 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1652  56 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99291   0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417   0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157   0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     92176  78 +    217609 I
e Carollia_perspicillata.CarPer_scaffold_92756                4014  76 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030   0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310   0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18499585  55 +  63665305 I
e Canis_lupus_familiaris.chr16                            17958073  55 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9033808  55 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    184422  55 -    185531 I
e CanFam4.chr16                                           17798365  55 -  60362399 I
e Camelus_ferus.KB017975.1                                  402319  55 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2334036  55 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10001578  55 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2819682   0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014   0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932   0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376   0 +  48749331 C
e Bison_bison.KN261452.1                                    200171   0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115   0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905   0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440   0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3651  76 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675   0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      184239  76 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192   0 -   2318259 C
e Ailurus_fulgens.LNAC01001112.1                             78530  55 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9509749  55 -  29979442 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     69210 509 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           826486  55 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       5046 27 +     62944 AGAGAAATAT--------------GAT-T-GGAggccaaa-agc
s Allactaga_bullata.AllBul_scaffold_9566                     73687 18 -     89534 gggaaaatat--------------aat-t-ata----------g
i Allactaga_bullata.AllBul_scaffold_9566                 I 54 C 0
s Allenopithecus_nigroviridis.k141_3361533                   12964 27 -     52922 acagaaatat--------------gat-t-ggagccccaa-agc
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         12907 27 -     28001 agagaaatat--------------gat-t-ggagccccaa-agc
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          3353 27 -     18505 agagaaatat--------------gat-t-ggagcccgaa-agc
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           4202 27 -     12518 agagaaatat--------------gat-t-ggagccccaa-agc
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                              1762 27 -     27731 agaaaaatat--------------gac-t-ggagatcaaa-cac
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                1890 27 +      3134 agaaaaatat--------------gac-t-ggagatcaaa-cac
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               2022 27 -     45847 agaaaaatat--------------gac-t-ggagatcaaa-cac
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                23227 27 +     25266 agaaaaatat--------------gac-t-ggagatcaaa-cac
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           2412 27 +      2906 agaaaaatat--------------gac-t-ggagatcaaa-cac
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            16525 27 -     18578 agaaaaatat--------------gac-t-ggagatcaaa-cac
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              1914 27 +     47717 agaaaaatat--------------gac-t-ggagatcaaa-cac
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             2041 27 -      3544 agaaaaatat--------------gac-t-ggagatcaaa-cac
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             13262 27 +     50774 agaaaaatat--------------gac-t-ggagatcaaa-cac
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  13886 27 -     33861 agggaaatat--------------gat-t-ggaaaccaaa-acc
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            13906 27 -     34016 agggaaatat--------------gat-t-ggagatcaaa-acc
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4296303 27 -   5030052 AGGGAAATAT--------------GAT-T-GGAGATCAAA-ACC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             13908 27 -     34685 agggaaatat--------------gat-t-ggagaccaaa-acc
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               27032 27 -     47192 agggaaatat--------------gat-t-ggagaccaaa-acc
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      10839 18 +     20879 ggagaaacat--------------agt-g-aga----------g
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 17 C 0
s Arctocebus_calabarensis.k141_2318572                       10171 28 +     14667 agagaaatac--------------aaa-t-ggaggccaaagggg
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Avahi_laniger.k141_765380                                  52720 27 -     92717 agggaaatat--------------gat-t-ggaggccaaa-ggg
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              53349 27 +     85213 agggaaatat--------------gat-t-ggaggccaaa-ggg
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             3647 27 -     10423 agggacatat--------------gac-t-ggagaccgaa-agc
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             23149 26 +     31915 agggacatat--------------gac-t-ggag-ccaaa-agt
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            3613 27 +      5267 agggacatat--------------gac-t-ggagaccgaa-agc
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23588827 27 - 189096842 AGGGACATAT--------------GAC-T-GGAGACCGAA-AGC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             10357 27 -     12001 agggacatat--------------gac-t-ggagaccgaa-agc
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Carlito_syrichta.NW_007247396.1                           200469  2 +    308752 CA------------------------------------------
i Carlito_syrichta.NW_007247396.1                        n 30 I 84
s Cebuella_niveiventris.k141_1251222                          8272 27 -     11392 aaggacatat--------------gac-t-ggagaccgaa-aga
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               4370 27 -      7577 aaggacatat--------------gac-t-ggagaccgaa-aga
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_olivaceus.k141_1000828                                2305 27 -      2944 aggaaaatat--------------gat-c-ggagaccaaa-agc
i Cebus_olivaceus.k141_1000828                           C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         4479  2 +     31688 cg------------------------------------------
i Cephalopachus_bancanus.k141_1423433                    I 82 I 28
s Cercocebus_atys.KQ010504.1                               4473917 27 +   4669795 AGAGAAATAT--------------GAT-T-GGAGCCCCAA-AGC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        12466 27 -     19203 agagaaatat--------------gat-t-ggagccccaa-agc
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           6888 27 +      8260 agagaaatat--------------gat-t-ggagccccaa-agc
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           7114 27 +     27781 agagaaatat--------------gat-t-ggagccccaa-agc
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         7274 27 -     20310 agagaaatat--------------gat-t-ggagccccaa-agc
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          10253 27 +     29689 agagaaatat--------------gat-t-ggagccccaa-agc
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            4684 27 +      9989 agagaaatat--------------gat-t-ggagccccaa-agc
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          12932 27 -     27936 agagaaatat--------------gat-t-ggagccccaa-agc
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            1798 27 -     17152 agagaaatat--------------gat-t-ggagccccaa-agc
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38815336 27 +  39242232 agagaaatat--------------gat-t-ggagccccaa-agc
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21221027 27 -  21565898 agagaaatat--------------gat-t-ggagccccaa-agc
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       38145 27 -     53127 agagaaatat--------------gat-t-ggagccccaa-agc
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        5416 27 +      7159 aaagaaatat--------------gat-t-ggagccccaa-agc
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       12948 27 -     27947 agagaaatat--------------gat-t-ggagccccaa-agc
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         12921 27 +     17596 agagaaatat--------------gat-t-ggagccccaa-agc
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          2155 27 +     26000 agagaaatat--------------gat-t-ggagccccaa-agc
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             20107 27 -     52598 agggaaatat--------------gat-c-tgaggccaaa-ggg
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           15474 27 +     57038 agggaaatat--------------gat-c-ggaggccaaa-ggg
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chlorocebus_aethiops.ctg25                              18426905 27 -  18827391 agagaaatat--------------gat-t-ggagccccaa-agc
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       13342 27 -     50209 agagaaatat--------------gat-t-ggagccccaa-agc
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135420342 27 + 135778131 AGAGAAATAT--------------GAT-T-GGAGCCCCAA-AGC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1908856 27 +   2368649 AGAGAAATAT--------------GAT-T-GGAGCCCCAA-AGC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199948535 27 + 200372422 agagaaatat--------------gat-t-ggagccccaa-agc
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              35394 27 +     84244 agagaaatat--------------gat-t-ggagccccaa-agc
i Colobus_polykomos.k141_906115                          C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    836148 18 +   1526836 agagaaacag--------------gac-c-aga----------g
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 36 C 0
s Daubentonia_madagascariensis.ctg71                      12536349 27 -  12879189 agagaaatat--------------gat-t-ggaggccaaa-ggg
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Erythrocebus_patas.Contig38                             21203513 27 -  21539334 agagaaatat--------------gat-t-ggagccccaa-agc
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              12826 27 -     14127 agggaaatat--------------gat-t-ggaggccaaa-gag
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                5524 27 -     16928 agggaaatat--------------gat-t-ggaggccaaa-gag
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              14553 27 -     25546 agggaaatat--------------gat-t-ggaggccaaa-gag
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            11751 27 +     26330 agggaaatat--------------gat-t-ggaggccaaa-gag
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 12991 27 +     23973 agggaaatat--------------gat-t-ggaggccaaa-gag
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                11751 27 +     75513 agggaaatat--------------gat-t-ggaggccaaa-gag
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  9689 27 +     97555 agggaaatat--------------aat-t-ggaggccaaa-gag
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            12608 27 +     26496 agggaaatat--------------gat-t-ggaggccaaa-gag
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  3226 27 -     17153 agggaaatat--------------gat-t-ggaggccaaa-gag
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              12802 27 +    111500 agggaaatat--------------gat-t-ggaggccaaa-gag
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Galago_moholi.ctg2040                                     425118 28 -    453645 agagaaatac--------------aaaat-ggaggccaaa-ggg
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             2825 28 +     11339 agagaaatac--------------aaaat-ggaggccaaa-ggg
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1959596                            6632 28 +      6795 agagaaatAc--------------aaaat-ggaggccggg-ggg
i Galagoides_demidoff.k141_1959596                       C 0 N 0
s Galeopterus_variegatus.GalVar_scaffold_197845               3061 27 -      3123 ggaaaaatct--------------gat-t-gaaagtgaaa-ggg
i Galeopterus_variegatus.GalVar_scaffold_197845          I 327 N 0
s Gorilla_beringei.k141_3596273                              14298 27 -     32273 agagagatat--------------gat-t-ggaggccaaa-agc
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186336445 27 + 186649187 agagaaatat--------------gat-t-ggaggccaaa-agc
i Gorilla_gorilla.LT578341.1                             I 259 C 0
s Hapalemur_alaotrensis.k141_170648                           5881 27 -     19426 agggaaatac--------------gat-t-ggaggccaaa-ggg
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             11030 27 -     15286 agggaaatac--------------gat-t-ggaggccaaa-ggg
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             12669 27 +     18253 agggaaatac--------------gat-t-ggaggccaaa-ggg
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         12770 27 -     41752 agggaaatac--------------gat-t-ggaggccaaa-ggg
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         12608 27 -     16460 agggaaatac--------------gat-t-ggaggccaaa-ggg
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Hoolock_leuconedys.ctg274                                    433113 27 +    630532 agagaaatat--------------gat-t-ggaggccaaa-agc
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_232023                                 879 27 -     12752 agagaaatat--------------gat-t-ggaggccaaa-agc
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                                923 27 +     14092 agagaaatat--------------gat-t-ggaggccaaa-agc
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189541706 27 - 191637585 agagaaatat--------------gat-t-ggaggccaaa-agc
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3334600 27 -  11177569 agagaaatat--------------gat-t-ggaggccaaa-agc
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7518923 18 -   7955117 ggagaaacgt--------------gat-t-aca----------g
i Ictidomys_tridecemlineatus.JH393364.1                  I 37 C 0
s Indri_indri.k141_3655594                                   21573 27 +     31101 agggaaatat--------------gat-t-ggaggccaaa-ggg
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15523113 27 -  30322482 agggaaatac--------------gat-t-ggaggccaaa-ggg
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        5929 27 +     64341 agggacacgt--------------gac-t-ggagaccaaa-agc
i Leontocebus_fuscicollis.k141_1820339                   I 49 C 0
s Leontocebus_illigeri.k141_3350179                           3256 27 +      4941 agggacacgt--------------gac-t-ggagaccaaa-agc
i Leontocebus_illigeri.k141_3350179                      I 49 C 0
s Leontocebus_nigricollis.k141_4610752                        5972 27 +     35603 agggacacgt--------------gac-t-ggagaccaaa-agc
i Leontocebus_nigricollis.k141_4610752                   I 49 C 0
s Leontopithecus_chrysomelas.k141_1519602                    27426 27 +     38576 ggggacatat--------------gac-t-ggagaccaaa-agc
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         24123 27 +     66356 ggggacatat--------------gac-t-ggagaccaaa-agc
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         10000 27 -     23766 agggcaatat--------------gat-t-ggaggccaaa-ggg
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             28066 27 +     45836 agggcaatat--------------gat-t-ggaggccaaa-ggg
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                           611 27 +     25010 agggcaatat--------------gat-t-ggaggccaaa-ggg
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      26002 27 +     54090 agggcaatat--------------gat-t-ggaggccaaa-ggg
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     4979  6 -     14121 ggacaa--------------------------------------
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 11
s Lophocebus_aterrimus.ctg367                              1435464 27 +   1826925 agagaaatat--------------gat-t-ggagccccaa-agc
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            4298 27 +     11245 agagaaatac--------------aaa-t-ggaggccaaa-ggg
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1003151 27 +   6120653 agagaaatac--------------aaa-t-ggaggccaaa-ggg
i Loris_tardigradus.ctg83                                C 0 C 0
s Macaca_arctoides.k141_2326796                               5279 27 +     40492 agagaaatat--------------gat-t-ggagccccaa-agc
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59674541 27 +  60120075 agagaaatat--------------gat-t-ggagccccaa-agc
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 11035 27 -     26193 agagaaatat--------------gat-t-ggagccccaa-agc
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            78839 27 -    114318 agagaaatat--------------gat-t-ggagccccaa-agc
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  4538 27 -     23192 agagaaatat--------------gat-t-ggagccccaa-agc
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                13998 27 -     29190 agagaaatat--------------gat-t-ggagccccaa-agc
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  22564 27 +     37952 agagaaatat--------------gat-t-ggagccccaa-agc
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186837654 27 + 187317192 AGAGAAATAT--------------GAT-T-GGAGCCCCAA-AGC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25456215 27 -  25927173 AGAGAAATAT--------------GAT-T-GGAGCCCCAA-AGC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  78414 27 +     89720 agagaaatat--------------gat-t-ggagccccaa-agc
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 5412 27 +     20474 agagaaatat--------------gat-t-ggagccccaa-agc
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   5212 27 -     14993 agagaaatat--------------gat-t-ggagccccaa-agc
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  328083 27 -    668171 agagaaatat--------------gat-t-ggagccccaa-agc
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 3524 27 -     24072 agagaaatat--------------gat-t-ggagccccaa-agc
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               24152 27 -     45290 agagaaatat--------------gat-t-ggagccccaa-agc
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23935737 27 -  24302211 agagaaatat--------------gat-t-ggagccccaa-agc
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               349869 27 +    752769 agagaaatat--------------gat-t-ggagccccaa-agc
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33101231 18 -  40650429 ggagaaacat--------------gat-t-aca----------g
i Marmota_marmota.CZRN01000018.1                         I 37 C 0
s Mico_argentatus.k141_1239457                                4187 27 -      7380 agggacatat--------------gac-t-ggagaccgaa-agc
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               3260 27 +     18990 agggacatat--------------gac-t-ggagaccgaa-agc
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      4199 27 -      7356 agggacatat--------------gac-t-ggagaccgaa-agc
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18290530 27 -  93316391 AAGGAAATAT--------------GAT-C-GGAGGCCAAA-GGG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_534055                           7462 27 -     28506 agagaaatat--------------gat-t-ggagccccaa-agc
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirza_zaza.k141_952172                                      8081 27 -     37649 agggaaatat--------------gat-c-ggaagccaaa-ggg
i Mirza_zaza.k141_952172                                 C 0 C 0
s Nasalis_larvatus.k141_413338                               13457 27 +     21681 agagaaatat--------------gat-t-ggagccccaa-aga
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nycticebus_bengalensis.LG01                            102578331 27 - 196305487 agagaaatac--------------aaa-c-ggaggccaaa-ggg
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_771082                               176 27 -      2667 agagaaatac--------------aaa-c-ggaggccaaa-ggg
i Nycticebus_coucang.k141_771082                         C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105748752 27 + 199412804 agagaaatac--------------aaa-t-ggaggccaaa-ggg
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1362084 11 +   3988456 --------------------------------ACGGGCTT-GGT
i Ochotona_princeps.JH802162.1                           I 6 C 0
s Oryctolagus_cuniculus.CM000791.1                        67145823  6 + 174332312 GGACAA--------------------------------------
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 11
s Otolemur_crassicaudatus.k141_222918                         2659 28 +      8798 agagaaatac--------------aaaat-ggaggccaaa-agg
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             694824 28 -   1103335 agagaaatac--------------aaaat-ggAGGCCAAA-AGG
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    42393 27 +     80009 AGAGAAATAT--------------GAT-T-GGAGGCCAAA-AGC
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189141305 27 + 189151597 AGAGAAATAT--------------GAT-T-GGAGGCCAAA-AGC
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                183441491 27 + 183742232 AGAGAAATAT--------------GAT-T-GGAGCCCCAA-AGC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             5185 27 +     20448 agagaaatat--------------gat-t-ggagccccaa-agc
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20561993 27 +  20919399 agagaaatat--------------gat-t-ggagccccaa-agc
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   3929 27 +     41871 agagaaatat--------------gat-t-ggagccccaa-agc
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     7214 27 +     27711 agagaaatat--------------gat-t-ggagccccaa-agc
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  7294 27 +      9205 agagaaatat--------------gat-t-ggagccccaa-agc
i Papio_ursinus.k141_3428135                             C 0 C 0
s Perodicticus_ibeanus.k141_855320                            8800 28 +     13100 agagaaatac--------------aag-t-ggaggccaaagagg
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             7202 28 +     25941 agagaaatac--------------aaa-t-ggaggccaaagggg
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Piliocolobus_badius.k141_1234363                           41954 27 +     62158 agagaaatat--------------gat-t-ggagccccaa-agc
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        36685 27 +     89929 agagaagtat--------------gat-t-ggagccccaa-agc
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            38101 27 +     51399 agagaagtat--------------gat-t-ggagccccaa-agc
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14294339 27 -  14605196 AGAGAAATAT--------------GAT-T-GGAGCCCCAA-AGC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189129436 27 + 189387572 AGAGAAATAT--------------GAT-T-GGAGGCCAAA-AGC
i Pongo_abelii.CM009266.2                                T 24608 C 0
s Pongo_pygmaeus.ctg66                                     9569044 27 +   9816681 agagaaatat--------------gat-t-ggaggccaaa-agc
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               71625 27 -     81375 agagaaatat--------------gat-t-ggagccccaa-agc
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              3445 27 +     19060 agagaaatat--------------gat-t-ggagccccaa-agc
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2595791 27 -   4620579 AGGGAAATAC--------------GAT-T-GGAGGCCAAA-GGG
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     989775 11 +   2598838 AGGGAAATAT--------------G-------------------
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 2
s Propithecus_coronatus.k141_347390                          28085 10 +     38485 agggaaatat----------------------------------
i Propithecus_coronatus.k141_347390                      C 0 I 3
s Propithecus_diadema.k141_357118                             4245 11 +      4256 agggaaatat--------------g-------------------
i Propithecus_diadema.k141_357118                        C 0 N 0
s Propithecus_edwardsi.k141_1176054                          25598 25 +     35766 agggaaatatgattggaggccaaag-------------------
i Propithecus_edwardsi.k141_1176054                      C 0 I 2
s Propithecus_perrieri.k141_1200571                           3780 25 -     24134 agggaaatatgattggaggccaaag-------------------
i Propithecus_perrieri.k141_1200571                      C 0 I 2
s Propithecus_tattersalli.k141_790011                        27602 27 -     67325 agggaaatat--------------gat-t-ggaggccaaa-ggg
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           3838 11 -      6182 agggaaatat--------------g-------------------
i Propithecus_verreauxi.k141_956661                      C 0 I 2
s Pygathrix_cinerea.k141_1153803                             13456 27 -     91421 agagaaatat--------------gat-t-ggagccccaa-agt
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7607582 27 +   7812017 agagaaatat--------------gat-t-ggagccccaa-agc
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             13430 27 -     72585 agagaaatat--------------gat-t-ggagccccaa-agc
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             5145 27 -     11128 agagaaatat--------------gat-t-ggagccccaa-agc
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91234505 27 - 195417433 AGAGAAATAT--------------GAT-T-GGAGCCCCAA-AGC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7670150 27 +   7961872 agagaaatat--------------gat-t-gaagccccaa-agc
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_2619299                               6626 27 -      8359 agggacatgt--------------gac-t-ggagaccaaa-agc
i Saguinus_bicolor.k141_2619299                          I 49 C 0
s Saguinus_imperator.k141_2524406                              567 27 +      2197 agggacatgt--------------gac-t-ggagaccaaa-agc
i Saguinus_imperator.k141_2524406                        I 49 C 0
s Saguinus_inustus.k141_699149                               11989 27 +     13640 agggacatgt--------------gac-t-ggagaccaaa-agc
i Saguinus_inustus.k141_699149                           I 49 C 0
s Saguinus_labiatus.k141_285685                               6851 27 +      8564 acggacatgt--------------gac-t-ggagaccaaa-agc
i Saguinus_labiatus.k141_285685                          I 49 C 0
s Saguinus_midas.LG03                                    209467701 27 + 209938924 agggacatgt--------------gac-t-ggagaccaaa-agc
i Saguinus_midas.LG03                                    I 49 C 0
s Saguinus_mystax.k141_374627                                 6415 27 -      9399 agggacatgt--------------gac-t-ggagaccaga-agc
i Saguinus_mystax.k141_374627                            I 49 C 0
s Saimiri_boliviensis.NW_024100920.1                     119949661 27 - 121099817 AGGGAAATAT--------------GAC-T-GGAGACCAAA-AGC
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       22117 27 +     46362 agggaaatat--------------gac-t-ggagaccaaa-agc
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               22212 27 +     45824 agggaaatat--------------gac-t-ggagaccaaa-agc
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             38840 27 -     64574 agggaaatat--------------gac-t-ggagaccaaa-agc
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               1846 27 -     23631 agggaaatat--------------gac-t-ggagaccaaa-agc
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 22105 27 -     61129 agggaaatat--------------gac-t-ggagaccaaa-agc
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          17962 27 -     19888 agagaaatat--------------gat-t-ggagccccaa-agc
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      25165 27 +     39453 agagaaatat--------------gat-t-ggagccccaa-agc
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            5684 27 +     27826 agagaaatat--------------gat-t-ggagccccaa-agc
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             5204 27 -     19483 agagaaatat--------------gat-t-ggagccccaa-agc
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      5273 27 +      7198 agagaaatat--------------gat-t-ggagccccaa-agc
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         13526 27 +     15514 ggagaaatat--------------gat-t-ggagccccaa-agc
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1952120 18 -   3870691 ggagaaatgt--------------gat-t-aca----------g
i Spermophilus_dauricus.KZ294078.1                       I 37 C 0
s Symphalangus_syndactylus.tarseq_199                      1091748 27 -   1523678 agagaaatat--------------gat-t-ggaggccaaa-agc
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_2201908                               25475  2 +     70052 cg------------------------------------------
i Tarsius_lariang.k141_2201908                           I 465 I 28
s Tarsius_wallacei.k141_254427                                 310  2 -     16117 cg------------------------------------------
i Tarsius_wallacei.k141_254427                           N 0 I 28
s Theropithecus_gelada.CM009954.1                        186426857 27 + 186847797 AGAGAAATAT--------------GAT-T-GGAGCCCCAA-AGC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          9256 27 -     20410 agaggaatat--------------gat-t-ggagccccaa-agc
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    13452 27 +     15221 agagaaatat--------------gat-t-ggagccccaa-agc
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        9357 27 +     19930 agaggaatat--------------gat-t-ggagccccaa-agc
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       5784 27 -     19997 agagaaatat--------------gat-t-ggagccccaa-agc
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            45913 27 -     60166 agagaaatat--------------gat-t-ggagccccaa-agc
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        13379 27 -     27529 agagaaatat--------------gat-t-ggagccccaa-agc
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     13323 27 -     18194 agagaaatat--------------gat-t-ggagccccaa-agc
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           7051 27 -     21137 agagaaatat--------------gat-t-ggagccccaa-agc
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    5754 27 -     10723 agagaaatat--------------gat-t-ggagccccaa-agc
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         4910 27 +      9834 agagaaatat--------------gat-t-ggagccccaa-agc
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        23223 27 +     32220 agagaaatat--------------gat-t-ggagccccaa-agc
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5937325 27 +   6242583 agagaaatat--------------gat-t-ggagccccaa-agc
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        6578 27 +     20839 agagaaatat--------------gat-t-ggagccccaa-agc
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2154653 27 +   4065304 ggagaaaaac--------------gag-t-ggaggccaga-gga
i Tupaia_chinensis.KB320699.1                            I 34 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     8301 27 -     10553 ggagaaaaac--------------gag-t-ggaggccaga-gga
i Tupaia_tana.TupTan_flattened_line_97126                I 34 C 0
s Varecia_rubra.k141_590885                                  10446 27 +     50397 agggaaatat--------------gat-t-ggaggtcaaa-ggg
i Varecia_rubra.k141_590885                              I 38 C 0
s Varecia_variegata.k141_1128296                             10501 27 +     24756 agggaaatat--------------gat-t-ggaggtcaaa-ggg
i Varecia_variegata.k141_1128296                         I 38 C 0
s Xerus_inauris.XerIna_scaffold_48378                        23088 18 -     24430 gaagaaacat--------------gat-t-aga----------g
i Xerus_inauris.XerIna_scaffold_48378                    I 35 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      13506 18 +     63895 GAGAAAAAAt--------------aac-t-aga----------c
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 43 I 410
e Echinops_telfairi.JH980293.1                            48779651 164 + 111700974 I
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Chiropotes_albinasus.k141_2813271                           9356 381 +     11226 I
e Cebus_unicolor.k141_219506                                 14903  0 -     16904 I
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Mus_pahari.LT608297.1                                   31353515 705 -  89631738 I
e Mus_spretus.CM004101.1                                  90750934 691 - 130317789 I
e Mus_musculus.chr8                                       87648857 707 - 129401213 I
e Mus_caroli.LT608237.1                                   84359872 692 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zalophus_californianus.ZalCal_flattened_line_17732          4349 55 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                  9981 55 -     43706 I
e Vicugna_pacos.KN270157.1                                 5371064 55 -   5488506 I
e Ursus_maritimus.KK499267.1                               4849611 55 -   5085361 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52652  8 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     80101 76 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   3761  0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    386403 55 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      117950 55 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 71325 110 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                 9779 70 +     41958 I
e Sus_scrofa.CM000828.4                                    6809663 77 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629              17502 55 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             29916 55 +     97271 I
e Sorex_araneus.JH798187.1                                13649852 60 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               2947 55 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11304  0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152480  8 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                86981 55 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rattus_norvegicus.chr16                                 53568931 910 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20273487 55 -  38429054 I
e Pteropus_vampyrus.KN525825.1                             1359049 55 +   4952924 I
e Pteropus_alecto.KB030862.1                              22975963 55 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         39415 55 +     42204 I
e Pteronotus_parnellii.KE909381.1                            13855 81 -     21811 I
e Psammomys_obesus.NESX01036370.1                             9107 499 -     21651 I
e Procavia_capensis.ProCapCap_scaffold_85530                 11991 249 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             1020 56 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18193469 497 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11828 55 -     78924 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Panthera_tigris.KE722367.1                               4720208 55 -   8748460 I
e Panthera_pardus.KV860321.1                                263570 55 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  150365 55 +    230217 I
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       461535 55 -    559221 I
e Orycteropus_afer.OryAfe_flattened_line_144387               9003 16 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    78850 497 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   23879 792 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              505841 55 -   2017862 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Nyctereutes_procyonoides.CAJHUB010000658.1               9148567 55 -   9404916 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20306159 54 +  31847680 I
e Nannospalax_galili.KL204047.1                            2025215 7823 -   3037898 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187970 110 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33185 55 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902629 55 -   4330536 I
e Myotis_davidii.KB100139.1                                1586559 55 -   6019432 I
e Myotis_brandtii.KE162005.1                                278865 55 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               300393 55 -  14710649 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           5693 55 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   34613 55 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 140540 53 -    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         4903 55 -      8324 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             33502 55 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1849825 55 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                14559 88 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    20898 16 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12180961 469 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 31477 495 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365              9216 54 +     13704 I
e Megaderma_lyra.MegLyr_scaffold_4542                         9519 4280 -    207569 I
e Manis_pentadactyla.KN006162.1                              50341  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352  0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 89799 48 +     94391 I
e Lycaon_pictus.CM007581.1                                17954313 55 -  59628241 I
e Loxodonta_africana.GL010049.1                            4216156 234 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Leptonychotes_weddellii.KB714746.1                       3042035 55 +   3914936 I
e Lasiurus_borealis.LasBor_scaffold_50988                    12479 3019 +     29960 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  43658 55 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42403 64 +     43066 I
e Hipposideros_armiger.JXIK01000431.1                       110974 61 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_384612                 297 328 -       958 I
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               241501 55 +    327341 I
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  8618  0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20195104  0 + 205367284 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Equus_przewalskii.KK951119.1                               32375 55 +    498745 I
e Equus_caballus.CM000403.2                               18530360 55 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1282539 55 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2144621 55 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16328499 55 -  41312741 I
e Ellobius_talpinus.LOJH01109367.1                            5126 789 -      6299 I
e Ellobius_lutescens.LOEQ01008920.1                          19045 777 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089466 1162 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Eidolon_helvum.KE759718.1                                   9707 55 +     11740 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    5228 56 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  672475 56 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8629030 76 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            62473  5 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             27664 55 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_37019               1802 50 -     19598 I
e Cricetulus_griseus.LT883664.1                           11666269 486 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 48834 457 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          13502 50 -     20389 I
e Condylura_cristata.JH655891.1                           17547413  8 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            172152 108 +    839153 I
e Choloepus_didactylus.ChoDid_scaffold_45914                 17052 108 +     19366 I
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_713168             206  0 -      2554 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1652 56 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     92176 78 +    217609 I
e Castor_canadensis.CasCan_scaffold_2074                    136755  0 +    179628 C
e Carollia_perspicillata.CarPer_scaffold_92756                4014 76 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18499585 55 +  63665305 I
e Canis_lupus_familiaris.chr16                            17958073 55 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9033808 55 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    184422 55 -    185531 I
e CanFam4.chr16                                           17798365 55 -  60362399 I
e Camelus_ferus.KB017975.1                                  402319 55 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2334036 55 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10001578 55 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3651 76 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      184239 76 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Ailurus_fulgens.LNAC01001112.1                             78530 55 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9509749 55 -  29979442 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     69210 509 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           826486 55 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       5073 139 +     62944 cttgatataa------------------------------tagtaataaat---------------------tgg-ggt----------------aacttga----------------------------gcaaggc---ctgtttcttcagattctacttgaca----gctctgtg-------tct--tgaaggata-gagat-----------------g------------tt-cc----t-ttcct-a-gGACATAGGGAG--G-GCAGCCCTGAAGtgaag---gtttta
s Allactaga_bullata.AllBul_scaffold_9566                     73705 136 -     89534 gccaaca---------------------------------g-------------------------------agc-tga----------------t------ccaatggccataaactgggggaaacttagcaagat---tg-gttgttcagattctccctgg--tgtct--gtg---------tct--tcaaagg-------t-----------------g------------tt-cc----t-gt----cagg-tattgg--aagg-gtagctctggggtgaaa---gtttta
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   12991 139 -     52922 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattga----------------------------gcaaggc---ctatttcttcagattctacttgaca----tctctgtg-------tct--tgaagaata-gaggt-----------------g------------tt-cc----t-ttccc-a-gggcatagggag--g-gtagccctgaagtgaag---gttcca
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         12934 139 -     28001 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaactga----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gaggt-----------------g------------tt-cc----t-ttccc-a-gggcatagggag--g-gtagccctgaagtgaaa---gttcca
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          3380 139 -     18505 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattga----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gaggt-----------------g------------tt-cc----t-ttccc-a-gggcatagggag--g-gtagccctgacgtgaag---gtttca
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           4229 139 -     12518 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattga----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gaggt-----------------g------------tt-cc----t-ttccc-a-gggcatagggag--g-gtagccctgacgtgaag---gttcca
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                              1789 138 -     27731 cttgatatag------------------------------tagtaataaat---------------------tgg-gag----------------aa-ttga----------------------------gcaaggc---ctgcttcttcagattcctgttggca----tctgtgtg-------tct--tgaaggatg-aagat-----------------g------------tt-cc----c-ttcct-g-gggtatagggag--g-gtagccctgaagtgaag---gtctta
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                1917 138 +      3134 cttgatatag------------------------------tagtaataaat---------------------tgg-gag----------------aa-ttga----------------------------gcaaggc---ctgcttcttcagattcctgttggca----tctgtgtg-------tct--tgaaggatg-aagat-----------------g------------tt-cc----t-ttcct-g-gggtatagggag--g-gtagccctgaagtgaag---gtctta
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               2049 138 -     45847 ctcgatataa------------------------------tagtaataaat---------------------tgg-gag----------------aa-ttga----------------------------gcaaggc---ctgcttcttcagattcctgttggca----tctgtgtg-------tct--tgaaggatg-aagat-----------------g------------tt-cc----t-ttcct-g-gggtatagggag--g-gtagccctgaagtgaag---gtctta
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                23254 138 +     25266 cttgatatag------------------------------tagtaataaat---------------------tgg-gag----------------aa-ttga----------------------------gcaaggc---ctgcttcttcagattcctgttggca----tctgtgtg-------tct--tgaaggatg-aagat-----------------g------------tt-cc----t-ttcct-g-gggtatagggag--g-gtagccctgaagtgaag---gtctta
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           2439 138 +      2906 cttgatatag------------------------------tagtaataaat---------------------tgg-gag----------------aa-ttga----------------------------gcaaggc---ctgcttcttcagattcctgttggca----tctgtgtg-------tct--tgaaggatg-aagat-----------------g------------tt-cc----t-ttcct-g-gggtatagggag--g-gtagccctgaagtgaag---gtctta
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            16552 138 -     18578 cttgatatag------------------------------tagtaataaat---------------------tgg-gag----------------aa-ttga----------------------------gcaaggc---ctgcttcttcagattcctgttggca----tctgtgtg-------tct--tgaaggatg-aagat-----------------g------------tt-cc----t-ttcct-g-gggtatagggag--g-gtagccctgaagtgaag---gtctta
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              1941 138 +     47717 cttgatataa------------------------------tagtaataaat---------------------tgg-gag----------------aa-ttga----------------------------gcaaagc---ctgcttcttcagattcctgttgcca----tctgtgtg-------tct--tgaaggatg-aagat-----------------g------------tt-cc----t-ttcct-g-gggtatagggag--g-gtagccctgaagtgaag---gtctta
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             2068 138 -      3544 cttggtatag------------------------------tagtaataaat---------------------tgg-gag----------------aa-ctga----------------------------gcaaggc---ctgcttcttcagattcctgttggca----tctgtgtg-------tct--tgaaggatg-aagat-----------------g------------tt-cc----t-ttcct-g-gggtatagggag--g-gtagccctgaagtgaag---gtctta
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             13289 138 +     50774 cttgatatag------------------------------tagtaataaat---------------------tgg-gag----------------aa-ttga----------------------------gcaaggc---ctgcttcttcagattcctgttggca----tctgtgtg-------tct--tgaaggatg-aagat-----------------g------------tt-cc----t-ttcct-g-gggtatagggag--g-gtagccctgaagtgaag---gtctta
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  13913 139 -     33861 cttgatacaa------------------------------tagtaataaat---------------------tgg-gag----------------aaatcga----------------------------gcaaggc---ctgtttcttcagattcctcttggca----tctctgtg-------tct--tgaaggatg-aagat-----------------g------------tt-cc----t-ttcct-a-gggtatagggag--g-gcagccctgaagtgaag---gtctta
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            13933 139 -     34016 cttgatacaa------------------------------tagtaataaat---------------------tgg-gag----------------aaattga----------------------------gcaaggc---ctgtttcttcagattcctcttggca----tctctgtg-------tct--tgaagggtg-aagat-----------------g------------tt-cc----t-ttcct-a-gggtatagggag--g-gcagccctgaagtgaag---gtctta
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4296330 139 -   5030052 CTtgatacaa------------------------------tagtaataaat---------------------tgg-gag----------------aaattga----------------------------gcaaggc---ctgtttcttcagattcctcttggca----tctctgtg-------tct--tgaagggtg-aagat-----------------g------------tt-cc----t-ttcct-a-gggtatagggag--g-gcagccctgaagtgaag---gtctta
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             13935 139 -     34685 cttgatacaa------------------------------tagtaataaat---------------------tgg-gag----------------aaatcga----------------------------gcaaggc---ctgtttcttcagattcctcttggca----tctctgtg-------tct--tgaaggatg-aagat-----------------g------------tt-cc----t-ttcct-a-gggtatagggag--g-gcagccctgaagtgaag---gtctta
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               27059 139 -     47192 cttgatacaa------------------------------tagtaataaat---------------------tgg-gag----------------aaatcga----------------------------gcaaggc---ctgtttcttcagattcctcttggca----tctctgtg-------tct--tgaaggatg-aagat-----------------g------------tt-cc----t-ttcct-a-gggtatagggag--g-gcagccctgaagtgaag---gtctta
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      10857 147 +     20879 gccagta---------------------------------g-------------------------------agg-tgatccaaatgataataaac------c-a--gg---------ggg--aa-ctt-agcaagt-cctg-tttgttctgattcttcttgg-g----t--ctc-tatg----ttt--gcaaggaca-aagtt-----------------g------------tt-ct----t-ttcgt-tggg-tataga--a--ggacagctttgcaataaag---gtttta
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       10199 122 +     14667 g-------------------------------------------------c---------------------cgg-aca----------------tacttta----------------------------gtgaggc---ctgtgtgttcagatttttcttggcc----tttctgag-------tCT--TTGACAATA-AGGAT-----------------G------------TT-TC----AATTCCT-TTGGGTATAGTGAG--G-GTAGCACTAGAATGAAG---GCTTTA
i Arctocebus_calabarensis.k141_2318572                   C 0 I 182
s Avahi_laniger.k141_765380                                  52747 139 -     92717 gttggtataa------------------------------tgttaataaac---------------------tgg-ggg----------------aactt-a----------------------------gcaaggc---ctgcttgttcagattcttcttggca----tttttttg-------tct--ttgatgata-aggat-----------------g------------tt-tc----a-ttcct-caggctatagggag--g-gtagctctggaacgaag---gcttta
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              53376 139 +     85213 gttggtataa------------------------------tgttaataaac---------------------tgg-ggg----------------aactt-a----------------------------gcaaggc---ctgcttgttcagattcttcttggca----tttttttg-------tct--ttgatgata-aggat-----------------g------------tt-tc----a-ttcct-caggctatagggag--g-gtagctctggaatgaag---gcttta
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             3674 139 -     10423 ctggatacaa------------------------------tagtaataaat---------------------ggg-aag----------------aaattga----------------------------gcaaggc---gtgtttcttcagattcctcttgtca----tctctgtg-------tct--tgaaggacg-aagat-----------------g------------tt-cc----t-ttcct-a-gggtatagggag--g-gtagccctgaagtgaag---gtctta
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             23175 138 +     31915 cttgatacaa------------------------------tagtaataaag----------------------gg-gag----------------aaactga----------------------------gcaaggc---ctgtttcttcagattcctcttggca----tctctgtg-------tct--tgaaggacg-aagat-----------------g------------ct-cc----t-ttcct-g-gggtattgggag--g-gtagccctgaagtgaag---gtctta
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            3640 139 +      5267 cttgatacaa------------------------------cagtaataaat---------------------ggg-gag----------------aaattga----------------------------gcaaggc---ctgtttcttcagattcctcttggaa----tctctgtg-------tct--tgaaggacg-aagat-----------------g------------tt-cc----t-ttcct-a-gggtatagggag--g-gtagccctgaagtgaag---ctctta
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23588854 139 - 189096842 CTtgatacaa------------------------------tagtaataaat---------------------ggg-gag----------------aaattga----------------------------gcaaggc---ctgtttcttcagattcctcttggaa----tctctgtg-------tct--tgaaggacg-aagat-----------------g------------tt-cc----t-ttcct-a-gggtatagggag--g-gtagccctgaagtgaag---gtctta
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             10384 139 -     12001 cttgatacaa------------------------------tagtaataaat---------------------ggg-gag----------------aaattga----------------------------gcaaggc---ctgtttcttcagattcctcttggaa----tctctgtg-------tct--tgaaggacg-aagat-----------------g------------tt-cc----t-ttcct-a-gggtatagggag--g-gtagccctgaagtgaag---gtctta
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Carlito_syrichta.NW_007259797.1                           154999  58 -    496798 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGATA-ggtgt-----------------g------------tt-tc----t-ttctt-ctgggtaTAGGGA---G-ACAGCTCTGGAGTGAAG---GCTTTG
i Carlito_syrichta.NW_007259797.1                        I 30 I 191
s Cebuella_niveiventris.k141_1251222                          8299 139 -     11392 cttgatacaa------------------------------tagtaataaat---------------------ggg-gag----------------aaattga----------------------------gcaaggc---ctgtttcttcagatttctcttggaa----tctctgtg-------tct--tgaaggacg-aagat-----------------g------------tt-cc----t-ttcct-a-gggtatagggag--g-gtagccctgaagtgaag---gtctta
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               4397 139 -      7577 cttgatacaa------------------------------tagtaataaat---------------------ggg-gag----------------aaattga----------------------------gcaaggc---ctgtttcttcagattcctcttggaa----tctctgtg-------tct--tgaaggacg-aagat-----------------g------------tt-cc----t-ttcct-a-gggtatagggag--g-gtagccctgaagtgaag---gtctta
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_olivaceus.k141_1000828                                2332 137 -      2944 cttgatacag------------------------------tagtaattaac---------------------tgg-gag----------------aaattga----------------------------gcaaggc---ctgtttcttcagactcctcttggca----tctc--tg-------tct--tgaaggatg-aagat-----------------g------------tt-cc----t-ttcct-a-aggtggagggag--g-gtagccctgaagtgaag---gtctta
i Cebus_olivaceus.k141_1000828                           C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         4509  61 +     31688 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ggata-ggcgt-----------------g------------tt-tc----t-ttctt-ctgggtataggga---g-acagctctggagtgaagaaggctttg
i Cephalopachus_bancanus.k141_1423433                    I 28 C 0
s Cercocebus_atys.KQ010504.1                               4473944 139 +   4669795 CTTgatataa------------------------------tagtaataaac---------------------tgG-GGG----------------AAATTGA----------------------------GCAAGGC---CTGTTTCTTCAGATTCTACTTGACA----TCTCTGTG-------TCT--TGAAGGATA-GAGGT-----------------G------------TT-CC----t-ttcCC-A-GGGCATAGGGAG--G-GTAGCCctgaagtgaAG---GTTcca
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        12493 139 -     19203 cttgatataa------------------------------tagtaataaac---------------------tgg-ggg----------------aaattga----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--ggaaggaca-gaggt-----------------g------------tt-cc----t-ttccc-a-gggcatagggag--g-gtagccctgaagtgaag---gttcca
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           6915 139 +      8260 cttgatataa------------------------------tagtaataaac---------------------tgg-ggg----------------aaattga----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gaggt-----------------g------------tt-cc----t-ttccc-a-gggcatagggag--g-gtagccctgaagtgaag---gttcca
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           7141 139 +     27781 cttgatataa------------------------------tagtagtaaac---------------------tgg-ggg----------------aaattga----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gaggt-----------------g------------tt-cc----t-ttccc-a-gggcatagggag--g-gtagccctgaagtgaag---gttcca
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         7301 139 -     20310 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattga----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gaggt-----------------g------------tt-cc----t-ttccc-a-gggcacagggag--g-gtagccctgaagtgaag---gttcca
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          10280 139 +     29689 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattga----------------------------gcaaggc---ctatttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gaggt-----------------g------------tt-cc----t-ttccc-a-gggcacagggag--g-gtagccctgaagtgaag---gttcca
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            4711 139 +      9989 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattga----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gaggt-----------------g------------tt-cc----t-ttccc-a-gggcacagggag--g-gtagccctgaagtgaag---gtttca
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          12959 139 -     27936 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattga----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gaggt-----------------g------------tt-cc----t-ttccc-a-gggcacagggag--g-gtagccctgaagtgaag---gttcca
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            1825 139 -     17152 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattga----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gaggt-----------------g------------tt-cc----t-ttccc-a-gggcatagggag--g-gtagccctgaagtgaag---gttcca
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38815363 139 +  39242232 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattga----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gaggt-----------------g------------tt-cc----t-ttccc-a-gggcacagggag--g-gtagccctgaagtgaag---gttcca
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21221054 139 -  21565898 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattga----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gaggt-----------------g------------tt-cc----t-ttccc-a-gggcatagggag--g-gtagccctgaagtgaag---gttcca
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       38172 139 -     53127 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattga----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gaggt-----------------g------------tt-cc----t-ttccc-a-gggcacagggag--g-gtagccctgaagtgaag---gttcca
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        5443 139 +      7159 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattga----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gaggt-----------------g------------tt-cc----t-ttccc-a-gggcacagggag--g-gtagccctgaagtgaag---gttcca
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       12975 139 -     27947 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattga----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gaggt-----------------g------------tt-cc----t-ttccc-a-gggcatagggag--g-gtagccctgaagtgaag---gttcca
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         12948 139 +     17596 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattga----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gaggt-----------------g------------tt-cc----t-ttccc-a-gggcatagggag--g-gtagccctgaagtgaag---attcca
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          2182 139 +     26000 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattga----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gaggt-----------------g------------tt-cc----t-ttccc-a-gggcacagggag--g-gtagccctgaagtgaag---gttcca
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             20134 139 -     52598 gttggtataa------------------------------tgttaataaac---------------------tgg-ggg----------------aactt-a----------------------------gcaaggc---ctgctcattcagattcttcttggca----ttttcttg-------tct--ttgacgata-aggat-----------------g------------tt-tc----a-ttcct-caggctatagggaa--g-gtagctctggaatgaag---gcttta
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           15501 139 +     57038 gttggtataa------------------------------tgttaataaac---------------------tgg-ggg----------------aactt-a----------------------------gcaaggc---ctgctcatttagatttttcttggca----ttttcttg-------tct--ttgacgcta-aggat-----------------g------------tt-tc----a-ttcct-caggctatagggag--g-gtagctctggaatgaag---gcttta
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chlorocebus_aethiops.ctg25                              18426932 139 -  18827391 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattga----------------------------gcaaggc---ctatttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gaggt-----------------g------------tt-cc----t-ttccc-a-gagcatagggag--g-gtagccctgaagtgaag---gtttca
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       13369 139 -     50209 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattga----------------------------gcaaggc---ctatttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gaggt-----------------g------------tt-cc----t-ttccc-a-gggcatagggag--g-gtagccctgaagtgaag---gtttca
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135420369 139 + 135778131 CTtgatataa------------------------------tagtaataaat---------------------tgG-GGG----------------AAATTGA----------------------------GCAAGGC---CTATTTCTTCAGATTCTACTTGACA----TCTCTGTG-------TCT--TGAAGGATA-GAGGT-----------------G------------TT-cc----t-ttccC-A-GGGCatagggag--g-gtagccctgaagtgaag---gtttca
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1908883 138 +   2368649 CTtgatataa------------------------------tagtaataaat---------------------tgG-GGG----------------AAATTGA----------------------------GCAAGGC---CTGTTTCTTCGGA-TCTACTTGACA----TCTCTCTG-------TCT--TGAAGGCTA-GAGAT-----------------G------------TT-CC----T-TTCCG-A-GGGCatagggag--g-gcagccctgaagtgcag---gtttca
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199948562 137 + 200372422 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattga----------------------------gcaaggc---ccgtttcttcaga-tctacttgaca----tctctctg-------tct--tgaaggcta-gagat-----------------g------------tt-cc----t-ttccg-a-gggtatgggg-g--g-gcagccctgaagtgcag---gtttca
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              35421 138 +     84244 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattga----------------------------gcaaggc---ctgtttcttcgga-tctacttgaca----tctctctg-------tct--tgaaggcta-gagat-----------------g------------tt-cc----t-ttctg-a-gggcatagggag--g-gcagccctgaagtgcag---gtttca
i Colobus_polykomos.k141_906115                          C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    836166 154 +   1526836 gccaatg---agctgctctagcggtagcaacctggggcctc-------------------------------agg-tgg----------------g--------aa-g---a-agac------aaa----accaggt---ga-tttgtgcacattctttttgg-a----t--ctg-c-------tct--tcaaggata-acgat-----------------g------------tt-tc----t-ttctt-cggg-tactgg--a--g-gtaactgtgtgaggaag---gattta
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12536376 138 -  12879189 gttggtataa------------------------------tgataatgaac---------------------agg-ggg----------------a--ctta----------------------------gcaaggc---ctgctcgttcagattcttcttggca----tttctgtg-------tct--ttgacgata-aggat-----------------g------------tt-tc----a-ttcct-ctgggtatagggag--g-gtagctgtggaatgaag---gctgta
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Erythrocebus_patas.Contig38                             21203540 139 -  21539334 cttaatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattga----------------------------gcaaggc---ctatttcttcagattctacttgaca----tctctgtg-------tct--tgaaggaca-gaggt-----------------g------------tt-cc----t-ttccc-a-gggcatagggag--g-gtagccctgacgtgaag---gtttca
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              12853 139 -     14127 gttggtataa------------------------------tgttaataaac---------------------tgg-agg----------------aactt-a----------------------------gcaaagc---ctgctcgttcagattcttcttggca----ttttcttg-------tct--tttatgata-aagat-----------------g------------tt-tc----a-ttccc-tggggtatagagag--g-gtagctctggaatgaag---ttttta
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                5551 139 -     16928 gttggtataa------------------------------tgttaataaac---------------------tgg-agg----------------aactt-a----------------------------gcaaagc---ctgctcgttcagattcttcttggca----ttttcttg-------tct--tttatgata-aagat-----------------g------------tt-tc----a-ttccc-tggggtatagagag--g-gtagctctggaatgaag---gtttta
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              14580 139 -     25546 gttggtataa------------------------------tgttaataaac---------------------tgg-ggg----------------aactt-a----------------------------gcaaagc---ctgctcgttcagattcttcttggca----ttttcttg-------tct--tttatgata-aggat-----------------g------------tt-tt----a-ttccc-tggggtatagagag--g-gtagctctggaatgaag---gtttta
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            11778 139 +     26330 gttggtataa------------------------------tgttaataaac---------------------tgg-ggg----------------aactt-a----------------------------ggaaagc---ctgctcattcagattcttcttggca----ttttcttg-------tct--tttatgata-aggat-----------------g------------tt-tc----a-ttccc-tggggtatagagag--g-gtagctctggaatgaag---gtttta
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 13018 139 +     23973 gttggtataa------------------------------tgttaataaac---------------------tgg-agg----------------aactt-a----------------------------gcaaagc---ctgctcattcagattcttcttggca----ttttcttg-------tct--tttatgata-aagat-----------------g------------tt-tc----a-ttccc-tggggtatagagag--g-gtagctctggaatgaag---gtttta
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                11778 139 +     75513 gttggtataa------------------------------tgttaataaac---------------------tgg-ggg----------------aactt-a----------------------------ggaaagc---ctgctcattcagattcttcttggca----ttttcttg-------tct--tttatgata-aggat-----------------g------------tt-tc----a-ttccc-tggggtatagagag--g-gtagctctggaatgaag---gtttta
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  9716 139 +     97555 gttggtataa------------------------------tgttaataaac---------------------tgg-agg----------------aactt-a----------------------------gcaaagc---ctgctcgttcagattcttcttggca----ttttcttg-------cct--tttatgata-aagat-----------------g------------tt-tc----a-ttccc-tggggtatagagag--g-gtagctctggaatgaag---gtttta
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            12635 139 +     26496 gttggtataa------------------------------tgttaataaac---------------------tgg-agg----------------aactt-a----------------------------gcaaagc---ctgctcgttcagattcttcttggca----ttttcttg-------tct--tttatgata-aggat-----------------g------------tt-tc----a-ttccc-tggggtatagagag--g-gtagctctggaatgaag---gtttta
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  3253 139 -     17153 gttggtataa------------------------------tgttaataaac---------------------tgg-agg----------------aactt-a----------------------------gcaaagc---ctgctcgttcagattcttcttggca----ttttcttg-------tct--tttatgata-aagat-----------------g------------tt-tc----a-ttccc-tggggtatagagag--g-gtagctctggaatgaag---gtttta
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              12829 139 +    111500 gttggtataa------------------------------tgttaataaac---------------------tgg-agg----------------aactt-a----------------------------gcaaagc---ctgctcgttcagattcttcttggca----ttttcttg-------tct--tttatgata-aagat-----------------g------------tt-tc----a-ttccc-tggggtatagagag--g-gtagctctggaatgaag---ttttta
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Galago_moholi.ctg2040                                     425146 120 -    453645 g-------------------------------------------------c---------------------tgg-aca----------------tacttta----------------------------gtgaggc---ctgtgtgttcagattcttcttggcc----tttctgtg-------ttt--ttgacaat--aggat-----------------g------------tt-tc----a-tccct-ttgggtatagggag--a-gtaggtctagaatgaag---gcttta
i Galago_moholi.ctg2040                                  C 0 I 184
s Galago_senegalensis.k141_631886                             2853 120 +     11339 g-------------------------------------------------c---------------------tgg-aca----------------tacttta----------------------------gtgaggc---ctgtgtgttcagattcttctcggcc----tttctgtg-------ttt--ttgacaat--aggat-----------------g------------tt-tc----a-tccct-ttgggtatcgggag--a-gtaggtctagaatgaag---gcttta
i Galago_senegalensis.k141_631886                        C 0 I 184
s Galagoides_demidoff.k141_1711393                             155 121 +     41679 g-------------------------------------------------c---------------------tgg-aCA----------------tacttta----------------------------gtgaggc---ctgtgtgttcaaattcttctcggcc----tttctgtg-------ttt--ttgacaata-aggat-----------------g------------tt-tc----a-ctcct-ttgggtatagggag--a-gtaGGTCTAGAATGAAG---ACTTTA
i Galagoides_demidoff.k141_1711393                       N 0 I 184
s Galeopterus_variegatus.GalVar_scaffold_108840                164 138 -      9135 gttaatagaa------------------------------tggtaacaaac---------------------tag-ggg----------------gaacttt----------------------------gcaaggc---ct-tttgttcatattcttcttggca----tctctgtg-------tct--gggaggata-aggat-----------------g------------tc-tc----t-ttcct-ctgt-tataaggag--g-gtagctctttaatgaaa---gtttta
i Galeopterus_variegatus.GalVar_scaffold_108840          N 0 C 0
s Gorilla_beringei.k141_3596273                              14325 139 -     32273 cttgatataa------------------------------tagtaataaat---------------------tgg-ggt----------------aacttga----------------------------gcatggc---ctgtttcttcagattctacttgaca----gctctgtg-------tct--tgaaggata-gagat-----------------g------------tt-cc----t-ttcct-a-ggacatagggag--g-gcagccctgaagtgaag---gtttta
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186336472 139 + 186649187 cttgatataa------------------------------tagtaataaat---------------------tgg-ggt----------------aacttga----------------------------gcaaggc---ctgtttcttcagattctacttgaca----gctctgtg-------tct--tgaaggata-gagat-----------------g------------tt-cc----t-ttcct-a-ggacatagggag--g-gcagccctgaagtgaag---gtttta
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           5908 139 -     19426 gttggtataa------------------------------tgttaataaac---------------------tgg-ggg----------------aactt-a----------------------------gcaaggc---ccgcacgttcagattcttcttggca----ttttcttg-------tct--ttgacaata-aggat-----------------g------------tt-tt----a-ttccc-tggggtattgagag--g-gtagctctggaatgaag---gcttta
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             11057 139 -     15286 gttggtataa------------------------------tgttaataaac---------------------tgg-ggg----------------aactt-a----------------------------gcaaggc---ccgcacgttcagattcttcttggca----ttttcttg-------tct--ttgacaata-aggat-----------------g------------tt-tt----a-ttccc-tggggtattgagag--g-gtagctctggaatgaag---gcttta
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             12696 139 +     18253 gttggtataa------------------------------tgttaataaac---------------------tgg-ggg----------------aactt-a----------------------------gcaaggc---ccgcacgttcagattcttcttggca----ttttcttg-------tct--ttgacaata-aggat-----------------g------------tt-tt----a-ttccc-tggggtattgagag--g-gtagctctggaatgaag---gcttta
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         12797 139 -     41752 gttggtataa------------------------------tgttaataaac---------------------tgg-ggg----------------aactt-a----------------------------gcaaggc---ccacacgttcagattcttcttggca----ttttcttg-------tct--ttgacaata-aggat-----------------g------------tt-tt----a-ttccc-tggggtattgagag--g-gtagctctggaatgaag---gcttta
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         12635 139 -     16460 gttggtataa------------------------------tgttaataaac---------------------tgg-ggg----------------aactt-a----------------------------gcaagac---ccgcacgttcagattcttcttggca----ttttcttg-------tct--ttgacaata-aggat-----------------g------------tt-tt----a-ttccc-tggggtattgagag--g-gtagctctggaatgaag---gcttta
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Hoolock_leuconedys.ctg274                                    433140 139 +    630532 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aacttga----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gagat-----------------g------------tt-cc----t-ttcct-a-ggaaatagggag--g-gcagccctgaagtgaag---gtttta
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_232023                                 906 139 -     12752 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aacttga----------------------------gcaaggc---ctgtttcttcagattctacttgata----tctctgtg-------tct--tgaaggata-gagat-----------------g------------tt-cc----t-ttcct-a-ggatatagggag--g-gcagccctgaagtgaag---gtttta
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                                950 139 +     14092 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aacttga----------------------------gcaaggc---ctgtttcttcagattctacttgata----tctctgtg-------tct--tgaaggata-gagat-----------------g------------tt-tc----t-ttcct-a-ggatatagggag--g-gcagccctgaagtgaag---gtttta
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189541733 139 - 191637585 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aacttga----------------------------gcaaggc---ctgtttcttcagattctacttgata----tctctgtg-------tct--tgaaggata-gagat-----------------g------------tt-cc----t-ttcct-a-ggatatagggag--g-gcagccctgaagtgaag---gtttta
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3334627 139 -  11177569 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aacttga----------------------------gcaaggc---ctgtttcttcagattctacttgata----tctctgtg-------tct--tgaaggata-gagat-----------------g------------tt-cc----t-ttcct-a-ggatatagggag--g-gcagccctgaagtgaag---gtttta
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7518941 131 -   7955117 gccaaca---------------------------------g-------------------------------agg-taa----------------c------c-aaag---a------g----aa--tttagcaagt-cctg-tttgttcagattattcttgg-a----t--ctc-tatg----tat--tcaaggata-aagat-----------------a------------tc-ct----t-ttcat-tgag-tataga--a--gggtagctgtagaataaag---gtgtta
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   21600 139 +     31101 gttggtataa------------------------------tgttaataaac---------------------tgg-ggg----------------aactt-a----------------------------gcaaggc---ctgcttgttcagattcttcctggca----tttttttg-------tct--ttgccgata-aggat-----------------g------------tt-tc----a-ttcct-caggctatagggag--g-gtagctctggaacgaag---gcttta
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15523140 139 -  30322482 gttggtataa------------------------------tgttaataaac---------------------tgg-ggg----------------aactt-a----------------------------gcaaggc---ctgcacgttcagattcttcttggca----ttttcttg-------tct--ttgacgata-aggat-----------------g------------tt-tc----a-ttccc-tggggtattgagag--g-gtagctctggaatgaag---gcttta
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        5956 137 +     64341 cttggtacca------------------------------tagtaataaat---------------------cgg-gag----------------aacctga----------------------------gcaaggc---ctgtttcttcagattcctcttggcc----tcgctgtg-------tct--ggaaggacg-aaggt-----------------g------------tt-cc----t-ttcct-a-gggtatagggag--a-gtagccctggggtgaag---gtct--
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           3283 137 +      4941 cttggtacca------------------------------tagtaataaat---------------------cgg-gag----------------aacctga----------------------------gcaaggc---ctgtttcttcagattcctcttggcc----tcgctgtg-------tct--ggaaggacg-aaggt-----------------g------------tt-cc----t-ttcct-a-gggtatagggag--a-gtagccctggggtgaag---gtct--
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        5999 137 +     35603 cttggtacca------------------------------tagtaataaat---------------------cgg-gag----------------aacctga----------------------------gcaaggc---ctgtttcttcagattcctcttggcc----tcgctgtg-------tct--ggaaggacg-aaggt-----------------g------------tt-cc----t-ttcct-a-gggtatagggag--a-gtagccctggggtgaag---gtct--
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    27453 138 +     38576 cttgatacat------------------------------tagtaataaat---------------------ggg-gag----------------aaattga----------------------------gcaaggc---ctgtttcttcagattcctcttggca----tctctgcg-------tct--taaaggatg-aagat-----------------g------------tt-cc----t-tttct-a-gcgtatagggag--g-gtag-tctgaagtgaag---gtctta
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         24150 138 +     66356 cttgatacat------------------------------tagtaataaat---------------------ggg-gag----------------aaattga----------------------------gcaaggc---ctgtttcttcagattcctcttggca----tctctgcg-------tct--taaaggacg-aagat-----------------g------------tt-cc----t-tttct-a-gcgtatagggag--g-gtag-tctgaagtgaag---gtctta
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         10027 136 -     23766 gctgtta-aa------------------------------tgttaataaac---------------------tgg-ggg----------------aactt-a----------------------------gcaagac---ctgctcattcagattcttcttggca----ttttcttg-------tct----gacgata-aggat-----------------g------------tt-tc----a-ttcct-cgggctacagcgag--g-gtagctctcgaatgaag---gcttta
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             28093 136 +     45836 gctgtta-aa------------------------------tgttaataaac---------------------tgg-ggg----------------aactt-a----------------------------gcaagac---ctgctcattcagattcttcttggca----ttttcttg-------tct----gacgata-aggat-----------------g------------tt-tc----a-ttcct-cgggctacagcgag--g-gtagctctcgaatgaag---gcttta
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                           638 136 +     25010 gttggtaaaa------------------------------tgttaataaac---------------------tgg-ggg----------------aactt-a----------------------------gcaaggc---ctgctcattcagattcttcttggca----ttttcttg-------tct--ttgac---a-aggat-----------------g------------tt-tc----a-tttct-caggctatagggag--g-gtagctttggaatgaag---gcttta
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      26029 136 +     54090 gctgtta-aa------------------------------tgttaataaac---------------------tgg-ggg----------------aactt-a----------------------------gcaagac---ctgctcattcagattcttcttggca----ttttcttg-------tct----gacgata-aggat-----------------g------------tt-tc----a-ttcct-cgggctacagcgag--g-gtagctctcgaatgaag---gcttta
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     4996  86 -     14121 ctga-------------------------------------ggtaacaccc---------------------aggaggg----------------aactaat----------------------------gt-----gct-----atctcaaattcttcctggca----tctctcca---------t--ttgtggata-aagac----------------at------------tc-ct----t-ccC-----------------------------------------------
i Lepus_americanus.LepAme_scaffold_107385                I 11 I 3
s Lophocebus_aterrimus.ctg367                              1435491 139 +   1826925 cttgacataa------------------------------tagtaataaac---------------------tgg-ggg----------------aaattga----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gaggt-----------------g------------tt-cc----t-ttccc-a-gggcatagggag--g-gtagccctgaagtgaag---gttcca
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            4325 121 +     11245 g-------------------------------------------------c---------------------tgg-aca----------------tacttta----------------------------gtgagga---ctgtgtgttcagattcttctcggcc----tttctgtg-------tct--ttgacaata-aggat-----------------g------------tt-tc----a-ttcct-ttgggtatagggaa--g-gtagctctagaatgaag---gcttta
i Loris_lydekkerianus.k141_2539221                       C 0 I 183
s Loris_tardigradus.ctg83                                  1003178 121 +   6120653 g-------------------------------------------------c---------------------tgg-aca----------------tacttta----------------------------gtgagga---ctgtgtgttcagattcttctcggcc----tttctgtg-------tct--ttgacaata-aggat-----------------g------------tt-tc----a-ttcct-ttgggtatagggaa--g-gtagctctagaatgaag---gcttta
i Loris_tardigradus.ctg83                                C 0 I 180
s Macaca_arctoides.k141_2326796                               5306 139 +     40492 cttgatataa------------------------------tagtaataaac---------------------tgg-ggg----------------aaactga----------------------------gcaaggc---ctgtttcttcaggttctacttgaca----cctctgtg-------tct--tgaaggata-gaggt-----------------g------------tt-cc----t-ctccc-a-gggcatagggag--g-gtagccctgaagtgaag---gttcca
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59674568 139 +  60120075 cttgatataa------------------------------tagcaataaac---------------------tgg-ggg----------------aaactga----------------------------gcaaggc---ctgtttcttcagattctacttgaca----cctctgtg-------tct--tgaaggata-gaggt-----------------g------------tt-cc----t-ttccc-a-gggcatagggag--g-gtagccctgaagtgaag---gttcca
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 11062 160 -     26193 cttgatataa------------------------------tagtaataaactgggggaaactgagcaaggcctgg-ggg----------------aaactga----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gaggt-----------------g------------tt-cc----t-ctccc-a-gggcatagggag--g-gtagccctgaagtgaag---gttcca
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            78866 139 -    114318 cttgatataa------------------------------tagtaataaac---------------------tgg-ggg----------------aaactga----------------------------gcaaggc---ctgtttcttcaggttctacttgaca----cctctgtg-------tct--tgaaggata-gaggt-----------------g------------tt-cc----t-ctccc-a-gggcatagggag--g-gtagccctgaagtgaag---gttcca
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  4565 137 -     23192 cttgatataa------------------------------tagtaataaac-----------------------g-ggg----------------aaattga----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gaggt-----------------g------------tt-cc----t-ttccc-a-gggcatagggag--g-gtagccctgaagtgaag---gttcca
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                14025 139 -     29190 cttgatataa------------------------------tagtaataaac---------------------tgg-ggg----------------aaattga----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gaggt-----------------g------------tt-cc----t-ctccc-a-gggcatagggag--g-gtagccctgaagtgaag---gttcca
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  22591 138 +     37952 cttgatataa------------------------------tagtaataaac---------------------tgg-ggg----------------aaattga----------------------------gcaaggc---ctgtttcttcagattctacttgaca----t-tctgtg-------tct--tgaaggata-gaggt-----------------g------------tt-cc----t-ttccc-a-gggcatagggag--g-gtagccctgaagtgaag---cttcca
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186837681 139 + 187317192 CTTgatataa------------------------------tagtaataaac---------------------tGG-ggg----------------aaattga----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tGAAGGATA-GAGGT-----------------G------------tt-cc----t-ttccc-a-gggcatagggag--g-gtagccctgaagtgaag---gttcca
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25456242 139 -  25927173 CTTgatataa------------------------------tagtaataaac---------------------tGg-ggg----------------aaattga----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gaggt-----------------g------------tt-cc----t-ctccc-a-gggcatggggag--g-gtagccctgaagtgaag---gttcca
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  78441 139 +     89720 cttgatataa------------------------------tagtaataaac---------------------tgg-ggg----------------aaattga----------------------------gcaaggt---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gaggt-----------------g------------tt-cc----t-ttccc-a-gggcatagggag--g-gtagccctgaagtgaag---gttcca
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 5439 139 +     20474 cttgatataa------------------------------tagtaataaac---------------------tgg-ggg----------------aaactga----------------------------gcaaggc---ctgtttcttcaggttctacttgaca----cctctgtg-------tct--tgaaggata-gaggt-----------------g------------tt-cc----t-ttccc-a-gggcatagggag--g-gtagccctgaagtgaag---gttcca
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   5239 139 -     14993 cttgatataa------------------------------tagtaataaac---------------------tgg-ggg----------------aaattga----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gaggt-----------------g------------tt-cc----t-ctccc-a-gggcatggggag--g-gtagccctgaagtgaag---gttcca
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  328110 139 -    668171 cttgatataa------------------------------tagtaataaac---------------------tgg-ggg----------------aaattga----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gaggt-----------------g------------tt-cc----t-ctccc-a-gggcatagggag--g-gtagccctgaagtgaag---gttcca
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 3551 139 -     24072 cttgatataa------------------------------tagtaataaac---------------------tgg-ggg----------------aaactga----------------------------gcaaggc---ctgtttcttcagattctacttgaca----cctctgtg-------tct--tgaaggata-gaggt-----------------g------------tt-cc----t-ttccc-a-gggcatagggag--g-gtagccctgaagtgaag---gttcca
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               24179 138 -     45290 cttgatataa------------------------------tagtaataaac---------------------tgg-ggg----------------aaattga----------------------------gcaaggc---ctgtttcttcagattctacttgaca----t-tctgtg-------tct--tgaaggata-gaggt-----------------g------------tt-cc----t-ttccc-a-gggcacagggag--g-gtagccctgaagtgaag---gttcca
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23935764 139 -  24302211 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattga----------------------------gcaaggc---ctgtttcttcagattctacttgacg----tctctgtg-------tct--tgaaggata-gaggt-----------------g------------tt-cc----t-ttccc-a-gggcataggggg--g-gtagccctgaagtgaag---gttcca
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               349896 138 +    752769 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattga----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gaggt-----------------g------------tt-cc----t-ttccc-a-gggcatag-gga--g-gtagccctgaagtgaag---gttcca
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33101249 132 -  40650429 gccaaca---------------------------------g-------------------------------agg-taa----------------c------c-aaag---a------g----aa--tttagcaagt-cctg-tttgttcagattattcttgg-a----t--ctc-t--gt--gtat--tcaaggata-aagat-----------------a------------tc-ct----t-ttcatttgag-tagaga--t--gggtagctgtagaataaag---gtgtta
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mico_argentatus.k141_1239457                                4214 139 -      7380 ctggatacaa------------------------------tagtaataaat---------------------ggg-gag----------------aaattga----------------------------gcaaggc---ctgtttcttcagattcctcttgtca----tctctgtg-------tct--tgaaggacg-aagat-----------------g------------tt-cc----t-ttcct-a-gggtatagggag--g-gtagccctgaagtgaag---gtctta
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               3287 139 +     18990 ctggatacaa------------------------------tagtaataaat---------------------ggg-gag----------------aaattga----------------------------gcaagac---ctgtttcttcagattcctcttgtct----tctctgtg-------tct--tgaaggacg-aagat-----------------g------------tt-cc----t-ttcct-a-gggtatagggag--g-gtagccctgaagtgaag---gtctta
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      4226 139 -      7356 ctggatacaa------------------------------tagtaataaat---------------------ggg-gag----------------aaattga----------------------------gcaaggc---ctgtttcttcagattcctcttgtca----tctctgtg-------tct--tgaaggacg-aagat-----------------g------------tt-cc----t-ttcct-a-gggtatagggag--g-gtagccctgaagtgaag---gtctta
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18290557  79 -  93316391 GTTGGTATAA------------------------------TGTTAATAAAC---------------------TGG-GAG----------------AACTT-A----------------------------GCGAGGC---CTGCTcattcagattcttcttggca----ttTTCTTG-------TCT--TTG-------------------------------------------------------------------------------------------------------
i Microcebus_murinus.CM007674.1                          C 0 I 42
s Miopithecus_ogouensis.k141_534055                           7489 139 -     28506 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattga----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctttgtg-------tct--tgaaggata-gaggt-----------------g------------tt-cc----t-ttccc-a-gggcatagggag--g-gtagccctgaagtgaag---gtttca
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirza_zaza.k141_952172                                      8108  79 -     37649 gttggtataa------------------------------tgttaataaac---------------------tgg-ggg----------------aactt-a----------------------------gcaaggc---ctgctcattcagattcttcttggca----ttttcttg-------tct--ttg-------------------------------------------------------------------------------------------------------
i Mirza_zaza.k141_952172                                 C 0 I 42
s Nasalis_larvatus.k141_413338                               13484 139 +     21681 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattca----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gagac-----------------g------------ct-cc----t-ttcct-g-gggcatagggag--g-gtagccctgaagtgaag---gtttca
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nycticebus_bengalensis.LG01                            102578358 121 - 196305487 g-------------------------------------------------c---------------------tgg-aca----------------tacttta----------------------------gtgaggc---ctttgtgttcagattcttctcagct----tttctgtg-------tct--ttgacaata-aggat-----------------g------------tt-tc----a-ttcct-ttggatatagggag--g-gtagctctagaatgaag---gcttta
i Nycticebus_bengalensis.LG01                            C 0 I 184
s Nycticebus_coucang.k141_771082                               203 121 -      2667 g-------------------------------------------------c---------------------tgg-aca----------------tacttta----------------------------gtgaggc---ctttgtgttcagattcttctcagct----tttctgtg-------tct--ttgacaata-aggat-----------------g------------tt-tc----a-ttcct-ttggatatagggag--g-gtagctctagaatgaag---gcttta
i Nycticebus_coucang.k141_771082                         C 0 I 184
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105748779 121 + 199412804 g-------------------------------------------------c---------------------tgg-aca----------------tacttta----------------------------gtgaggc---ctttgtgttcagattcttctcggct----tttctgtg-------tct--ttgacaata-aggat-----------------g------------tt-tc----a-ttcct-ttggatatagggag--g-gtagctctagaatgaag---gcttta
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 184
s Ochotona_princeps.JH802162.1                             1362095 103 +   3988456 CTGG-------------------------------------GGTAATAACT---------------------AGG-GGG----------------AACTAAT----------------------------CT-----GCT-----ACCTCAGATTACTTTGGGCA----GTTCTATA---------TGCTTGAGAACA-AAGATACTTCTTATGTGGCTTGT------------TC-CT----T-ACC-----------------------------------------------
i Ochotona_princeps.JH802162.1                           C 0 I 3
s Oryctolagus_cuniculus.CM000791.1                        67145840  85 + 174332312 CTGA-------------------------------------GGTAACGCTC---------------------AGGAGGG----------------GACCAAT----------------------------GT-----GCT-----ATCTCAGATTCTTCCTGGCA----TCTCTCCA---------T--TTGTGGATA-AAGAC-----------------T------------TC-CT----T-ATC-----------------------------------------------
i Oryctolagus_cuniculus.CM000791.1                       I 11 I 3
s Otolemur_crassicaudatus.k141_222918                         2687 121 +      8798 g-------------------------------------------------c---------------------tgg-aca----------------tacttta----------------------------gtgaggg---ctgtgtgttcagattcttctcggcc----tttctgtg-------ttt--ttgacaata-aggat-----------------g------------tt-tc----a-ttcct-ttgggtatagggag--a-gtaggtctagaatgaag---gcttta
i Otolemur_crassicaudatus.k141_222918                    C 0 I 180
s Otolemur_garnettii.GL873799.1                             694852 121 -   1103335 G-------------------------------------------------C---------------------TGG-ACA----------------TACTTTA----------------------------GTGAGGG---CTGtgtgttcagattcttcttggcc----tttctgtg-------ttt--ttaacaATA-AGGAT-----------------G------------TT-TC----A-TTCCT-TTGGGTATAGGGAG--A-GTAGGTCTAGAATGAAG---GCTTTA
i Otolemur_garnettii.GL873799.1                          C 0 I 179
s Pan_paniscus.KQ411613.1                                    42420 139 +     80009 TTTGATATAA------------------------------TAGTAACAAAC---------------------TGG-GGT----------------AACTTGA----------------------------GCAAGGC---CTGTTTCTTCAGATTCTACTTGACA----GCTCTGTG-------TCT--TGAAGGATG-GAGAT-----------------G------------TT-CC----T-TTCCT-A-GGACATAGGGAG--G-GCAGCCCTGAAGTGaag---gtttta
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189141332 139 + 189151597 CTtgatataa------------------------------tagtaataaat---------------------tgG-GGT----------------AACTTGA----------------------------GCAAGGC---CTGTTTCTTCAGATTCTACTTGACA----GCTCTGTG-------TCT--TGAAGGATA-GAGAT-----------------G------------TT-CC----T-TTCCT-A-GGACATAGGGAG--G-GCAGCCCTGAAGTGaag---gtttta
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                183441518 139 + 183742232 CTTgatataa------------------------------tagtaataaac---------------------tgG-GGG----------------AAATTGA----------------------------GCAAGGC---CTGTTTCttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gaggt-----------------g------------tt-cc----t-ttccc-a-gggcatagggag--g-gtagccctgaagtgaag---gttcca
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             5212 139 +     20448 cttgatataa------------------------------tagtaataaac---------------------tgg-ggg----------------aaattga----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gaggt-----------------g------------tt-cc----t-ttccc-a-gggcatagggag--g-gtagccctgaagtgaag---gttcca
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20562020 139 +  20919399 cttgatataa------------------------------tagtaataaac---------------------tgg-ggg----------------aaactga----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gaggt-----------------g------------tt-cc----t-ttccc-a-gggcatagggag--g-gtagccctgaagtgaag---tttcca
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   3956 139 +     41871 cttgacataa------------------------------tagtaataaac---------------------tgg-ggg----------------aaattga----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gaggt-----------------g------------tt-cc----t-ttccc-a-gggcatagggag--g-gtagccctgaagtgaag---gttcca
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     7241 139 +     27711 cttgatataa------------------------------tagtaataaac---------------------tgg-ggg----------------aaattga----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gaggt-----------------g------------tt-cc----t-ttccc-a-gggcatagggag--g-gtagccctgaagtgaag---gttcca
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  7321 137 +      9205 cttgatataa------------------------------tagtaataaac-----------------------g-ggg----------------aaattga----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gaggt-----------------g------------tt-cc----t-ttccc-a-gggcatagggag--g-gtagccctgaagtgaag---gttcca
i Papio_ursinus.k141_3428135                             C 0 C 0
s Perodicticus_ibeanus.k141_855320                            8828 120 +     13100 g-------------------------------------------------c---------------------tgg-aca----------------tacttta----------------------------gtgaggc---ctgtgtgctcagatttttcttggcc----tttctgtg-------tct--ttgacaaca-aggat-----------------g------------tt-tc----a-ttcct-ttgggtagagggag--g-gtagtcctagaatgaag---gcttt-
i Perodicticus_ibeanus.k141_855320                       C 0 I 184
s Perodicticus_potto.k141_1092580                             7230 120 +     25941 g-------------------------------------------------c---------------------tgg-aca----------------tacttta----------------------------gtgaggc---ctgtgtgctcagatttttcttggcc----tttctgtg-------tct--ttgacaaca-aggat-----------------g------------tt-tc----a-ttcct-ttgggtagagggag--g-gtagtcctagaatgaag---gcttt-
i Perodicticus_potto.k141_1092580                        C 0 I 184
s Piliocolobus_badius.k141_1234363                           41981 138 +     62158 cttgatataa------------------------------tagtaagaaat---------------------tgg-ggg----------------aaattga----------------------------gcaaggc---ctgtttcttcgga-tctacttgaca----tctctgtg-------tct--tgaaggata-gagat-----------------g------------tt-cc----t-ttcct-a-gggcatagggag--g-gcagccctgaagtgcag---gtttca
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        36712 138 +     89929 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattga----------------------------gcaaggc---ctgtttcttcgga-tctacttgaca----tctctgtg-------cct--tgaaggata-gagat-----------------g------------tt-cc----t-ttcct-a-gggcatagggag--g-gcagccctgaagtgcag---gtttca
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            38128 138 +     51399 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattga----------------------------gcaaggc---ctgtttcttcgga-tctacttgaca----tctctgtg-------cct--tgaaggata-gagat-----------------g------------tt-cc----t-ttcct-a-gggcatagggag--g-gcagccctgaagtgcag---gtttca
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14294366 138 -  14605196 CTtgatataa------------------------------tagtaataaat---------------------tgg-GGG----------------AAATTGA----------------------------GCAAGGC---CTGTTTCTTCGGA-TCTAGTTGACA----TCTCTGTG-------TCT--TGAAGGATA-GAGAT-----------------G------------TT-CC----T-TTCCT-A-GGGCATAgggag--g-gcagccctgaagtgcag---ctttca
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189129463 139 + 189387572 CTtgatataa------------------------------tagtaataaat---------------------tgG-ggg----------------aacttca----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gagat-----------------g------------tt-cc----t-ttcct-a-ggacatagggag--g-gcagccctgaagtgaag---gtttta
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9569071 139 +   9816681 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aacttga----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gagat-----------------g------------tt-cc----t-ttcct-a-ggacatagggag--g-gcagccctgaagtgaag---gtttta
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               71652 139 -     81375 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattca----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gagat-----------------g------------tt-cc----t-ttcct-a-gggcatagggag--g-gtagccctgaagtgaag---gtttca
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              3472 139 +     19060 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattca----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gagat-----------------g------------tt-cc----t-ttcct-a-gggcatagggag--g-gtagccctgaagtgaag---gtttca
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2595818 139 -   4620579 GTTGGTATAA------------------------------TGTTAATAAAc---------------------tgg-ggg----------------aactt-a----------------------------gcaaggc---ctgcacgttcagattcttcttggca----ttTTCTTG-------TCT--TTGACGATA-AGGAT-----------------A------------TT-TC----A-TTCCC-TGGGGTATTGAGAG--G-GTAGCTCTGGAATGAAG---GCTTTA
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     989788 139 +   2598838 GTTGGTATAA------------------------------TGTTAATAAAC---------------------TGG-GGG----------------AACTT-A----------------------------ACAAGGC---CTtcttgttcagattcttcttggca----tttttttg-------tct--ttgacgAta-aggat-----------------g------------tt-tc----a-ttcct-cgggctatagggag--g-gtagctctggaacgaag---gcttta
i Propithecus_coquerelli.NW_012148875.1                  I 2 C 0
s Propithecus_coronatus.k141_347390                          28098 139 +     38485 gttggtataa------------------------------tgttaataaac---------------------tgg-ggg----------------aactt-a----------------------------acaaggc---cttcttgttcagattcttcttggca----tttttttg-------tct--ttgacgata-aggat-----------------g------------tt-tc----a-ttcct-cgggctatagggag--g-gtagctctggaacgaag---gcttta
i Propithecus_coronatus.k141_347390                      I 3 C 0
s Propithecus_diadema.k141_58108                               143 139 -     13098 gttggtataa------------------------------tgttaataaac---------------------tgg-agg----------------aactt-a----------------------------acaaggc---cttcttgttcagattcttcttggca----tttttttg-------tct--ttgacgata-aggat-----------------g------------tt-tc----a-ttcct-ccggctatagggag--g-gtacctctggaacgaag---gcttta
i Propithecus_diadema.k141_58108                         N 0 C 0
s Propithecus_edwardsi.k141_1176054                          25625 139 +     35766 gttggtataa------------------------------tgttaataaac---------------------tgg-ggg----------------aactt-a----------------------------acaaggc---cttcttgttcagattcttcttggca----tttttttg-------tct--ttgacgata-aggat-----------------g------------tt-tc----a-ttcct-cgggctatagggag--g-gtagctctggaacgaag---gcttta
i Propithecus_edwardsi.k141_1176054                      I 2 C 0
s Propithecus_perrieri.k141_1200571                           3807 139 -     24134 gttggtataa------------------------------tgttaataaac---------------------tgg-ggg----------------aactt-a----------------------------acaaggc---cttcttgttcagattcttcttggca----tttttttg-------tct--ttgacgata-aggat-----------------g------------tt-tc----a-ttcct-cgggctatagggag--g-gtagctctggaacgaag---gcttta
i Propithecus_perrieri.k141_1200571                      I 2 C 0
s Propithecus_tattersalli.k141_790011                        27629 139 -     67325 gttggtataa------------------------------tgttaataaac---------------------tgg-gag----------------aactt-a----------------------------gcaaggc---ctgcttgttcagattcttcttggca----tttttttg-------tct--tttatgata-aagat-----------------g------------tt-tc----a-ttcct-caggctatagggag--g-gtagctctggaacgaag---gcttta
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           3851 139 -      6182 gttggtataa------------------------------tgttaataaac---------------------tgg-ggg----------------aactt-a----------------------------acaaggc---cttcttgttcagattcttcttggca----tttttttg-------tct--ttgacgata-aggat-----------------g------------tt-tc----a-ttcct-cgggctatagggag--g-gtagctctggaacgaag---gcttta
i Propithecus_verreauxi.k141_956661                      I 2 C 0
s Pygathrix_cinerea.k141_1153803                             13483 139 -     91421 cttgatataa------------------------------tagcaataaat---------------------tgg-ggg----------------aaattca----------------------------gcaaggc---ctgtttctttagattctacttgaca----tctctgta-------tct--tgaaggata-gagac-----------------a------------tt-cc----t-ttcct-a-gggcataaggag--g-gtagccctgaagtgaag---gtttca
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7607609 139 +   7812017 cttgatataa------------------------------tagcaataaat---------------------tgg-ggg----------------aaattca----------------------------gcaaggc---ctgtttctttagattctacttgaca----tctctgtg-------tct--tgaaggata-gagat-----------------a------------tt-cc----t-ttcct-a-gggcatagggag--g-gtagccctgaagtgaag---gtttca
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             13457 139 -     72585 cttgatataa------------------------------tagcaataaat---------------------tgg-ggg----------------aaattca----------------------------gcaaggc---ctgtttctttagattctacttgaca----tctctgtg-------tct--tgaaggata-gagat-----------------a------------tt-cc----t-ttcct-a-gggcatagggag--g-gtagccctgaagtgaag---gtttca
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             5172 139 -     11128 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattca----------------------------gcaaggc---ctgtttcttcagattctacttgaca----cctctgta-------tct--tgaaggata-gagaa-----------------g------------tt-cc----t-ttcct-a-gggcatagggag--g-gtagccctgaagtgaag---gtttca
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91234532 139 - 195417433 Cttgatataa------------------------------tagtaataaat---------------------tgG-ggg----------------aaattca----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gagaa-----------------g------------tt-cc----t-ttcct-a-gggcatagggag--g-gtagccctgaagtgaag---gtttca
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7670177 139 +   7961872 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattca----------------------------gcaaggc---ctgtttcttcagattctacttgaca----cctctgtg-------tct--tgaaggata-gagaa-----------------g------------tt-cc----t-ttcct-a-gggcatagggag--g-gtagccctgaagtgaag---gtttca
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_2619299                               6653 139 -      8359 cttggttccg------------------------------tagtaataaat---------------------cgg-gag----------------aacctga----------------------------gcagggc---ctgtttcttcagattcctcttggcc----tcgctgtg-------tct--ggaaggacg-gagat-----------------g------------tt-cc----t-ttcct-a-gggaataggggg--a-gtagccctggggtgaag---gtctta
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_imperator.k141_2524406                              594 139 +      2197 cttggttcca------------------------------tagtaataaat---------------------cgg-gag----------------aacctga----------------------------gcaaggc---ctgtttcttcagattcctcttggcc----tcgctgag-------tct--ggaaggacg-aagat-----------------g------------tt-cc----t-ttcct-a-gggtatagggag--a-gcagccctggggtgaag---gtctta
i Saguinus_imperator.k141_2524406                        C 0 C 0
s Saguinus_inustus.k141_699149                               12016 139 +     13640 cttggttcca------------------------------tagtaataaat---------------------cgg-gag----------------aacctga----------------------------gcaaggc---ctgtttcttcagattcctcttggcc----tagctgtg-------tct--ggaaggacg-aagat-----------------g------------tt-cc----t-ttcct-a-gggtatagggag--a-gtagccctggggtgaag---gtctta
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               6878 139 +      8564 cttggttcca------------------------------tagtaataagt---------------------cgg-gag----------------aacctga----------------------------gcaaggc---ctgtttcttcaggttcctcttggcc----tcgctgtg-------tct--ggaaggacg-aagat-----------------g------------tt-cc----t-ttcct-a-gggtatagggag--a-gtagccctggggtgaag---gtctta
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209467728 139 + 209938924 cttggttccg------------------------------tagtaataaat---------------------cgg-gag----------------agcctga----------------------------gcagggc---ctgtttcttcagattcctcttggcc----tcactgtg-------tct--ggaaggacg-aggat-----------------g------------tt-cc----t-ttcct-a-gggaatagtggg--a-gtagccctggggtgaag---gtctta
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 6442 139 -      9399 gttggttcca------------------------------tagtaataaac---------------------cag-gag----------------aacctga----------------------------gcaaggc---ctgtttcttcagattcctcttggcc----tagctgtg-------tct--ggaaggacg-aagat-----------------g------------tt-cc----t-ttcct-a-gggtatagggag--a-gtagccctggggtgaag---gtctta
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119949688 136 - 121099817 C-TGATACAA------------------------------TAGTAATAAGT---------------------TGG-GAG----------------AAACTGa----------------------------gcaaggc---ctgtttcttcagactTCTCTTGGCA----TCTC--TG-------TCT--TGAAGGATG-AAGAT-----------------G------------tt-cc----t-ttcct-a-gggtgtagggag--g-ggagccctgaagtgaag---gcctta
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       22144 136 +     46362 c-tgatacaa------------------------------tagtaataagt---------------------tgg-gag----------------aaactga----------------------------gcaaggc---ctgtttcttcagacttctcttggca----tctc--tg-------tct--tgaaggatg-aagat-----------------g------------tt-cc----t-ttcct-a-gggtgtagggag--g-ggagccctgaagtgaag---gcctta
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               22239 136 +     45824 c-tgatacaa------------------------------tagtaataagt---------------------tgg-gag----------------aaactga----------------------------gcaaggc---ctgtttcttcagacttctcttggca----tctc--tg-------tct--tgaaggatg-aagat-----------------g------------tt-cc----t-ttcct-a-gggtgtagggag--g-ggagccctgaagtgaag---gcctta
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             38867 136 -     64574 c-tgatacaa------------------------------tagtaataagt---------------------tgg-gag----------------aaactga----------------------------gcaaggc---ctgtttcttcagacttcttttggca----tctc--tg-------tct--cgaaggatg-aagat-----------------g------------tt-cc----t-ttcct-a-gggtgtagggag--g-ggagccctgaagtgaag---gcctta
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               1873 136 -     23631 c-tgatacaa------------------------------tagtaataagt---------------------tgg-gag----------------aaactga----------------------------gcaaggc---ctgtttcttcagacttctcttggca----tctc--tg-------tct--tgaaggatg-aagat-----------------g------------tt-cc----t-ttcct-a-gggtgtagggag--g-ggagccctgaagtgaag---gcctta
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 22132 136 -     61129 c-tgatacaa------------------------------tagtaataagt---------------------tgg-gag----------------aaactga----------------------------gcaaggc---ctgtttcttcagacttctcttggca----tctc--tg-------tct--tgaaggatg-aagat-----------------g------------tt-cc----t-ttcct-a-gggtgtagggag--g-ggagccctgaagtgaag---gcctta
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          17989 139 -     19888 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattca----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gagat-----------------g------------ct-cc----t-ttcct-a-gggcatagggag--g-gtaaccctgaagtgaag---gtttca
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      25192 139 +     39453 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattca----------------------------gcgaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gagat-----------------g------------ct-cc----t-ttcct-a-gggcatagggag--g-gtaaccctgaagtgaag---gtttca
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            5711 139 +     27826 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattca----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gagat-----------------g------------ct-cc----t-ttcct-a-gggcatagggag--g-gtaaccctgaagtgaag---gtttca
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             5231 139 -     19483 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattca----------------------------gcaaggt---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gagat-----------------g------------ct-cc----t-ttcct-a-gggcatagggag--g-gtaaccctgaagtgaag---gtttca
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      5300 139 +      7198 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattca----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gagat-----------------g------------ct-cc----t-ttcct-a-gggcatagggag--g-gtaaccctgaagtgaag---gtttca
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         13553 139 +     15514 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattca----------------------------gcaaggt---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gagat-----------------g------------ct-cc----t-ttcct-a-gggcatagggag--g-gtaaccctgaagtgaag---gtttca
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1952138 131 -   3870691 gccaaca---------------------------------g-------------------------------agg-taa----------------c----------t----a-aa---gag--aa--tttagcaagt-cctg-tttgttcagattattcttgg-a----t--ctc-tatg----tat--tcaaggata-aagat-----------------a------------tc-ct----t-ttcat-tgag-tataga--a--gggtagctgtagaataaag---gtgtta
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1091775 139 -   1523678 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aacttga----------------------------gcaaggc---ctgtttcttcagattctacttgata----tctctgtg-------tct--tgaaggata-gagat-----------------g------------tt-cc----t-ttcct-a-ggacatagggag--g-gcagccctgaagtgaag---gtttta
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_2201908                               25505  58 +     70052 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ggata-ggcat-----------------g------------tt-tc----t-ttctt-ctgggtataggga---g-acagctctggagtgaag---gctttg
i Tarsius_lariang.k141_2201908                           I 28 C 0
s Tarsius_wallacei.k141_254427                                 340  58 -     16117 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ggata-ggcat-----------------g------------tt-tc----t-ttctt-ctgggtataggga---g-acagctctggagtgaag---gctttg
i Tarsius_wallacei.k141_254427                           I 28 C 0
s Theropithecus_gelada.CM009954.1                        186426884 139 + 186847797 CTtgacataa------------------------------tagtaataaac---------------------tgg-ggg----------------aaattga----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gaggt-----------------g------------tt-cc----t-ttccc-a-gggcatagggag--g-gtagccctgaagtgaag---gttcca
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          9283 139 -     20410 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattca----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gagat-----------------g------------ct-cc----t-ttcct-a-gggcatagggag--g-gtaaccctgaagtgaag---gtttca
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    13479 139 +     15221 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattca----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gagat-----------------g------------ct-cc----t-ttcct-a-gggcatagggag--g-gtaaccctgaagtgaag---gtttca
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        9384 139 +     19930 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattca----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gagat-----------------g------------ct-cc----t-ttcct-a-gggcatagggag--g-gtaaccctgaagtgaag---gtttca
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       5811 139 -     19997 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattca----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gagat-----------------g------------ct-cc----t-ttcct-a-gggcatagggag--g-gtaaccctgaagtgaag---gtttca
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            45940 139 -     60166 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattca----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gagat-----------------g------------ct-cc----t-ttcct-a-gggcatagggag--g-gtaaccctgaagtgaag---gtttca
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        13406 139 -     27529 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattca----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gagat-----------------g------------ct-cc----t-ttcct-a-gggcatagggag--g-gtaaccctgaagtgaag---gtttca
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     13350 139 -     18194 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattca----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gagat-----------------g------------ct-cc----t-ttcct-a-gggcatagggag--g-gtaaccctgaagtgaag---gtttca
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           7078 139 -     21137 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattca----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gagat-----------------g------------ct-cc----t-ttcct-a-gggcatagggag--g-gtaaccctgaagtgaag---gtttca
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    5781 139 -     10723 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattca----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gagat-----------------g------------ct-cc----t-ttcct-a-gggcatagggag--g-gtaaccctgaagtgaag---gtttca
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         4937 139 +      9834 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattca----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gagat-----------------g------------ct-cc----t-ttcct-a-gggcatagggag--g-gtaaccctgaagtgaag---gtttca
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        23250 139 +     32220 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattca----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gagat-----------------g------------ct-cc----t-ttcct-a-gggcatagggag--g-gtaactctgaagtgaag---gtttca
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5937352 139 +   6242583 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattca----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gagat-----------------g------------ct-cc----t-ttcct-a-gggcatagggag--g-gtaaccctgaagtgaag---gtttca
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        6605 139 +     20839 cttgatataa------------------------------tagtaataaat---------------------tgg-ggg----------------aaattca----------------------------gcaaggc---ctgtttcttcagattctacttgaca----tctctgtg-------tct--tgaaggata-gagat-----------------g------------ct-cc----t-ttcct-a-gggcatagggag--g-gtaaccctgaagtgaag---gtttca
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2154680 136 +   4065304 attgatctca------------------------------tggtcataaac---------------------tgg-gtg----------------gaactta----------------------------acaggcc---tc-tttgtgcagattcttctcggta----tctctgtg-------tca--tc---tata-aggat-----------------a------------ttatt----t-ttctt-tggg-tttagggag--g-gtagctctggaatgaag---gtttta
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     8328 136 -     10553 attgatctca------------------------------ctgtcataaac---------------------tgg-gtg----------------gaactta----------------------------acaggcc---tc-tttgtgcagattcttctcagta----tctctgtg-------cca--tc---tata-aggat-----------------a------------ttatt----t-ttctt-tggg-tttagggag--g-gtagctctggaatgaag---gtttta
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Varecia_rubra.k141_590885                                  10473 139 +     50397 gttgatataa------------------------------tgttaataaac---------------------tgg-ggg----------------aactt-a----------------------------gcaaggc---ctgcacgttcagattcttcttggca----ttttcttg-------tct--tttatgata-aggat-----------------g------------tt-tc----a-ttccc-tggggtatagagag--g-gtagctctggaatgaag---gcttta
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             10528 139 +     24756 gttgatataa------------------------------tgttaataaac---------------------tgg-ggg----------------aactt-a----------------------------gcaaggc---ctgcacgttcagattcttcttggca----ttttcttg-------tct--tttatgata-aggat-----------------g------------tt-tc----a-ttccc-tggggtatagagag--g-gtagctctggaatgaag---gcttta
i Varecia_variegata.k141_1128296                         C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        23106 148 -     24430 gccaaca---------------------------------g-------------------------------agg-tga----------------c--------aa-gg-ga------g----aa--tttatcaagt-ccta-tttgttcagactattcttgg-a----t--ctc-tatgtatgtat--tcaagtaaaaaagat-----------------gggttgttttttttt-tt----t-ttatt-tgaa-tataga--a--gggtagctctggaataaag---gtgtta
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      13934 135 +     63895 ACCAACA---------------------------------G-------------------------------AAC-Cga----------------c------ctaatgg-gataaactggggaaaagttagcaaggc---tg-gctgttcagatgctccttgt------t--gtg---------tct--tcaagga-------t-----------------g------------tt-ccgttcc-tt----cagg-tactag--aaga-gcagctctGGAGGCATA---GTTTTA
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 410 I 50
e Echinops_telfairi.JH980293.1                            48779651 164 + 111700974 I
e Sapajus_macrocephalus.k141_351809                          54316   0 -     80660 C
e Sapajus_apella.ctg103                                    5419275   0 -   5703754 C
e Chiropotes_albinasus.k141_2813271                           9356 381 +     11226 I
e Cebus_unicolor.k141_219506                                 14903   0 -     16904 I
e Cebus_albifrons.Contig27                                25650611   0 +  26074798 C
e Mus_pahari.LT608297.1                                   31353515 705 -  89631738 I
e Mus_spretus.CM004101.1                                  90750934 691 - 130317789 I
e Mus_musculus.chr8                                       87648857 707 - 129401213 I
e Mus_caroli.LT608237.1                                   84359872 692 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276   0 +     12536 C
e Zalophus_californianus.ZalCal_flattened_line_17732          4349  55 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                  9981  55 -     43706 I
e Vicugna_pacos.KN270157.1                                 5371064  55 -   5488506 I
e Ursus_maritimus.KK499267.1                               4849611  55 -   5085361 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52652   8 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584   0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641   0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     80101  76 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   3761   0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937   0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    386403  55 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      117950  55 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 71325 110 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                 9779  70 +     41958 I
e Sus_scrofa.CM000828.4                                    6809663  77 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629              17502  55 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             29916  55 +     97271 I
e Sorex_araneus.JH798187.1                                13649852  60 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               2947  55 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11304   0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152480   8 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                86981  55 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482  20 -   3329780 I
e Rattus_norvegicus.chr16                                 53568931 910 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968   0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20273487  55 -  38429054 I
e Pteropus_vampyrus.KN525825.1                             1359049  55 +   4952924 I
e Pteropus_alecto.KB030862.1                              22975963  55 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         39415  55 +     42204 I
e Pteronotus_parnellii.KE909381.1                            13855  81 -     21811 I
e Psammomys_obesus.NESX01036370.1                             9107 499 -     21651 I
e Procavia_capensis.ProCapCap_scaffold_85530                 11991 249 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090   0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             1020  56 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384   0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813   0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18193469 497 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690  60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11828  55 -     78924 I
e Pantholops_hodgsonii.KE114653.1                          1265385   0 -   2937107 C
e Panthera_tigris.KE722367.1                               4720208  55 -   8748460 I
e Panthera_pardus.KV860321.1                                263570  55 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  150365  55 +    230217 I
e Ovis_canadensis.OviCan_scaffold_2572                      174468   0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491   0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       461535  55 -    559221 I
e Orycteropus_afer.OryAfe_flattened_line_144387               9003  16 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345   0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    78850 497 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   23879 792 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229   0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831   4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              505841  55 -   2017862 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Nyctereutes_procyonoides.CAJHUB010000658.1               9148567  55 -   9404916 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183   0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422   0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20306159  54 +  31847680 I
e Nannospalax_galili.KL204047.1                            2025215 7823 -   3037898 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187970 110 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33185  55 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902629  55 -   4330536 I
e Myotis_davidii.KB100139.1                                1586559  55 -   6019432 I
e Myotis_brandtii.KE162005.1                                278865  55 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               300393  55 -  14710649 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           5693  55 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   34613  55 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379  13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 140540  53 -    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466   0 -    437263 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         4903  55 -      8324 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             33502  55 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1849825  55 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                14559  88 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    20898  16 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961   0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12180961 469 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 31477 495 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365              9216  54 +     13704 I
e Megaderma_lyra.MegLyr_scaffold_4542                         9519 4280 -    207569 I
e Manis_pentadactyla.KN006162.1                              50341   0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352   0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 89799  48 +     94391 I
e Lycaon_pictus.CM007581.1                                17954313  55 -  59628241 I
e Loxodonta_africana.GL010049.1                            4216156 234 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268344   0 -    662738 C
e Leptonychotes_weddellii.KB714746.1                       3042035  55 +   3914936 I
e Lasiurus_borealis.LasBor_scaffold_50988                    12479 3019 +     29960 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650   0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493   0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293   0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626   0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547   0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  43658  55 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42403  64 +     43066 I
e Hipposideros_armiger.JXIK01000431.1                       110974  61 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577   3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_384612                 297 328 -       958 I
e Heterocephalus_glaber.JH602082.1                        20660051   0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516   0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               241501  55 +    327341 I
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312   0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  8618   0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20195104   0 + 205367284 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689   0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752   0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Equus_przewalskii.KK951119.1                               32375  55 +    498745 I
e Equus_caballus.CM000403.2                               18530360  55 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1282539  55 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2144621  55 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16328499  55 -  41312741 I
e Ellobius_talpinus.LOJH01109367.1                            5126 789 -      6299 I
e Ellobius_lutescens.LOEQ01008920.1                          19045 777 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089466 1162 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347   0 +    607251 C
e Eidolon_helvum.KE759718.1                                   9707  55 +     11740 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175   0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084   0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    5228  56 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  672475  56 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8629030  76 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076   0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            62473   5 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923   0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569   0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             27664  55 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_37019               1802  50 -     19598 I
e Cricetulus_griseus.LT883664.1                           11666269 486 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 48834 457 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          13502  50 -     20389 I
e Condylura_cristata.JH655891.1                           17547413   8 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            172152 108 +    839153 I
e Choloepus_didactylus.ChoDid_scaffold_45914                 17052 108 +     19366 I
e Chinchilla_lanigera.JH722012.1                           1251498   0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_713168             206   0 -      2554 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1652  56 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99291   0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417   0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157   0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     92176  78 +    217609 I
e Castor_canadensis.CasCan_scaffold_2074                    136755   0 +    179628 C
e Carollia_perspicillata.CarPer_scaffold_92756                4014  76 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030   0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310   0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18499585  55 +  63665305 I
e Canis_lupus_familiaris.chr16                            17958073  55 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9033808  55 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    184422  55 -    185531 I
e CanFam4.chr16                                           17798365  55 -  60362399 I
e Camelus_ferus.KB017975.1                                  402319  55 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2334036  55 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10001578  55 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2819682   0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014   0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932   0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376   0 +  48749331 C
e Bison_bison.KN261452.1                                    200171   0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115   0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905   0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440   0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3651  76 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675   0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      184239  76 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192   0 -   2318259 C
e Ailurus_fulgens.LNAC01001112.1                             78530  55 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9509749  55 -  29979442 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     69210 509 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           826486  55 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       5212 5 +     62944 ttt-tc
s Allactaga_bullata.AllBul_scaffold_9566                     73841 5 -     89534 tgctg-
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   13130 5 -     52922 tga-tc
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         13073 5 -     28001 gga-tc
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          3519 5 -     18505 tga-tc
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           4368 5 -     12518 tga-tc
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                              1927 5 -     27731 tga-tc
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                2055 5 +      3134 tga-tc
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               2187 5 -     45847 tga-tc
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                23392 5 +     25266 tga-tc
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           2577 5 +      2906 tga-tc
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            16690 5 -     18578 tga-tc
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              2079 5 +     47717 tga-tc
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             2206 5 -      3544 tga-tc
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             13427 5 +     50774 tga-tc
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  14052 5 -     33861 tga-tc
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            14072 5 -     34016 tga-tc
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4296469 5 -   5030052 tga-tc
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             14074 5 -     34685 tga-tc
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               27198 5 -     47192 tga-tc
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      11004 4 +     20879 tga-c-
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       10503 5 +     14667 tga-cc
i Arctocebus_calabarensis.k141_2318572                   I 182 C 0
s Avahi_laniger.k141_765380                                  52886 5 -     92717 tga-cc
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              53515 5 +     85213 tga-cc
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             3813 5 -     10423 tga-tc
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             23313 5 +     31915 tga-tc
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            3779 5 +      5267 tga-tc
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23588993 5 - 189096842 tga-tc
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             10523 5 -     12001 tga-tc
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Carlito_syrichta.NW_007247396.1                           200555 5 +    308752 TGA-CC
i Carlito_syrichta.NW_007247396.1                        I 84 C 0
s Cebuella_niveiventris.k141_1251222                          8438 5 -     11392 tga-tc
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               4536 5 -      7577 tga-tc
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_olivaceus.k141_1000828                                2469 5 -      2944 cga-tc
i Cebus_olivaceus.k141_1000828                           C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         4570 5 +     31688 tga-cc
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4474083 5 +   4669795 tga-tc
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        12632 5 -     19203 tga-tc
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           7054 5 +      8260 tga-tc
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           7280 5 +     27781 tga-tc
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         7440 5 -     20310 tga-tc
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          10419 5 +     29689 tga-tc
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            4850 5 +      9989 tga-tc
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          13098 5 -     27936 tga-tc
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            1964 5 -     17152 tga-tc
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38815502 5 +  39242232 tga-tc
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21221193 5 -  21565898 tga-tc
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       38311 5 -     53127 tga-tc
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        5582 5 +      7159 tga-tc
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       13114 5 -     27947 tga-tc
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         13087 5 +     17596 tga-tc
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          2321 5 +     26000 tgg-tc
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             20273 5 -     52598 tga-cc
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           15640 5 +     57038 tga-cc
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chlorocebus_aethiops.ctg25                              18427071 5 -  18827391 tga-tc
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       13508 5 -     50209 tga-tc
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135420508 5 + 135778131 tga-tc
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1909021 5 +   2368649 tga-tc
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199948699 5 + 200372422 tga-tc
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              35559 5 +     84244 tga-tc
i Colobus_polykomos.k141_906115                          C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    836320 4 +   1526836 aga-c-
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 1
s Daubentonia_madagascariensis.ctg71                      12536514 5 -  12879189 tga-cc
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Erythrocebus_patas.Contig38                             21203679 5 -  21539334 tga-tc
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              12992 5 -     14127 tga-cc
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                5690 5 -     16928 tga-cc
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              14719 5 -     25546 tga-cc
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            11917 5 +     26330 tga-cc
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 13157 5 +     23973 tga-cc
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                11917 5 +     75513 tga-cc
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  9855 5 +     97555 tga-cc
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            12774 5 +     26496 tga-cc
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  3392 5 -     17153 tga-cc
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              12968 5 +    111500 tga-cc
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Galago_moholi.ctg2040                                     425450 5 -    453645 tga-cc
i Galago_moholi.ctg2040                                  I 184 C 0
s Galago_senegalensis.k141_631886                             3157 5 +     11339 tga-cc
i Galago_senegalensis.k141_631886                        I 184 C 0
s Galagoides_demidoff.k141_1711393                             460 5 +     41679 tga-cc
i Galagoides_demidoff.k141_1711393                       I 184 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840                302 5 -      9135 tga-cc
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              14464 5 -     32273 ttt-tc
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186336611 5 + 186649187 ttt-tc
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6047 5 -     19426 tga-ct
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             11196 5 -     15286 tga-ct
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             12835 5 +     18253 tga-ct
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         12936 5 -     41752 tga-ct
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         12774 5 -     16460 tga-ct
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Hoolock_leuconedys.ctg274                                    433279 5 +    630532 tta-tc
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_232023                                1045 5 -     12752 tta-tc
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                               1089 5 +     14092 tta-tc
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189541872 5 - 191637585 tta-tc
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3334766 5 -  11177569 tta-tc
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7519072 4 -   7955117 tga-c-
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 1
s Indri_indri.k141_3655594                                   21739 5 +     31101 tga-cc
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15523279 5 -  30322482 tga-ct
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    27591 5 +     38576 tga-tc
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         24288 5 +     66356 tga-tc
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         10163 5 -     23766 tga-cc
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             28229 5 +     45836 tga-cc
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                           774 5 +     25010 tga-cc
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      26165 5 +     54090 tga-cc
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     5085 5 -     14121 TGG-CC
i Lepus_americanus.LepAme_scaffold_107385                I 3 C 0
s Lophocebus_aterrimus.ctg367                              1435630 5 +   1826925 tga-tc
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            4629 5 +     11245 tga-CC
i Loris_lydekkerianus.k141_2539221                       I 183 I 211
s Loris_tardigradus.ctg83                                  1003479 5 +   6120653 tgA-CC
i Loris_tardigradus.ctg83                                I 180 I 211
s Macaca_arctoides.k141_2326796                               5445 5 +     40492 tga-tc
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59674707 5 +  60120075 tga-tc
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 11222 5 -     26193 tga-tc
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            79005 5 -    114318 tga-tc
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  4702 5 -     23192 tga-tc
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                14164 5 -     29190 tga-tc
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  22729 5 +     37952 tga-tc
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186837820 5 + 187317192 tga-tc
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25456381 5 -  25927173 tga-tc
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  78580 5 +     89720 tga-tc
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 5578 5 +     20474 tga-tc
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   5378 5 -     14993 tga-tc
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  328249 5 -    668171 tga-tc
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 3690 5 -     24072 tga-tc
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               24317 5 -     45290 tga-tc
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23935903 5 -  24302211 tga-tc
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               350034 5 +    752769 tga-tc
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33101381 4 -  40650429 tga-c-
i Marmota_marmota.CZRN01000018.1                         C 0 I 1
s Mico_argentatus.k141_1239457                                4353 5 -      7380 tga-tc
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               3426 5 +     18990 tga-tc
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      4365 5 -      7356 tga-tc
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18290678 5 -  93316391 TGA-CC
i Microcebus_murinus.CM007674.1                          I 42 C 0
s Miopithecus_ogouensis.k141_534055                           7628 5 -     28506 tga-tc
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirza_zaza.k141_952172                                      8229 5 -     37649 tga-ct
i Mirza_zaza.k141_952172                                 I 42 C 0
s Nasalis_larvatus.k141_413338                               13623 5 +     21681 tga-tc
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nycticebus_bengalensis.LG01                            102578663 5 - 196305487 tga-cc
i Nycticebus_bengalensis.LG01                            I 184 C 0
s Nycticebus_coucang.k141_771082                               508 5 -      2667 tga-cc
i Nycticebus_coucang.k141_771082                         I 184 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749084 5 + 199412804 tga-cc
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 184 C 0
s Ochotona_princeps.JH802162.1                             1362201 5 +   3988456 TGG-CT
i Ochotona_princeps.JH802162.1                           I 3 C 0
s Oryctolagus_cuniculus.CM000791.1                        67145928 5 + 174332312 CGG-CC
i Oryctolagus_cuniculus.CM000791.1                       I 3 C 0
s Otolemur_crassicaudatus.k141_222918                         2988 5 +      8798 tga-cc
i Otolemur_crassicaudatus.k141_222918                    I 180 C 0
s Otolemur_garnettii.GL873799.1                             695152 5 -   1103335 TGA-CC
i Otolemur_garnettii.GL873799.1                          I 179 C 0
s Pan_paniscus.KQ411613.1                                    42559 5 +     80009 ttt-tc
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189141471 5 + 189151597 ttt-tc
i Pan_troglodytes.CM009242.2                             C 0 I 142
s Papio_anubis.CM001495.2                                183441657 5 + 183742232 tga-tc
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             5351 5 +     20448 tga-tc
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20562159 5 +  20919399 tga-tc
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   4095 5 +     41871 tga-tc
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     7380 5 +     27711 tga-tc
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  7458 5 +      9205 tga-tc
i Papio_ursinus.k141_3428135                             C 0 C 0
s Perodicticus_ibeanus.k141_855320                            9132 5 +     13100 tga-cc
i Perodicticus_ibeanus.k141_855320                       I 184 C 0
s Perodicticus_potto.k141_1092580                             7534 5 +     25941 tga-cc
i Perodicticus_potto.k141_1092580                        I 184 C 0
s Piliocolobus_badius.k141_1234363                           42119 5 +     62158 tga-cc
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        36850 5 +     89929 tga-cc
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            38266 5 +     51399 tga-cc
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14294504 5 -  14605196 tga-cc
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189129602 5 + 189387572 tta-tc
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9569210 5 +   9816681 tta-tc
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               71791 5 -     81375 tga-tc
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              3611 5 +     19060 tga-tc
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2595957 5 -   4620579 TGA-CT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     989927 5 +   2598838 tga-cc
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          28237 5 +     38485 tga-cc
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                               282 5 -     13098 tga-cc
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          25764 5 +     35766 tga-cc
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           3946 5 -     24134 tga-cc
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        27768 5 -     67325 tga-tc
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           3990 5 -      6182 tga-cc
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pygathrix_cinerea.k141_1153803                             13622 5 -     91421 tga-tc
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7607748 5 +   7812017 tga-tc
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             13596 5 -     72585 tga-tc
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             5311 5 -     11128 tga-tc
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91234671 5 - 195417433 tga-tc
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7670316 5 +   7961872 tga-tc
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_2619299                               6792 5 -      8359 tga-tc
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_imperator.k141_2524406                              733 5 +      2197 tga-tc
i Saguinus_imperator.k141_2524406                        C 0 C 0
s Saguinus_inustus.k141_699149                               12155 5 +     13640 tga-tc
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               7017 5 +      8564 tga-tc
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209467867 5 + 209938924 tga-tc
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 6581 5 -      9399 tga-tc
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119949824 5 - 121099817 tga-tc
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       22280 5 +     46362 tga-tc
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               22375 5 +     45824 tga-tc
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             39003 5 -     64574 tga-tc
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               2009 5 -     23631 tga-tc
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 22268 5 -     61129 tga-tc
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          18128 5 -     19888 tga-tc
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      25331 5 +     39453 tga-tc
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            5850 5 +     27826 tga-tc
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             5370 5 -     19483 tga-tc
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      5439 5 +      7198 tga-tc
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         13692 5 +     15514 tga-tc
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1952269 4 -   3870691 tga-c-
i Spermophilus_dauricus.KZ294078.1                       C 0 I 1
s Symphalangus_syndactylus.tarseq_199                      1091914 5 -   1523678 tta-tc
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_2201908                               25563 5 +     70052 tga-cc
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                 398 5 -     16117 tga-cc
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186427023 5 + 186847797 tga-tc
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          9422 5 -     20410 tga-tc
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    13618 5 +     15221 tga-tc
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        9523 5 +     19930 tga-tc
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       5950 5 -     19997 tga-tc
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            46079 5 -     60166 tga-tc
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        13545 5 -     27529 tga-tc
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     13489 5 -     18194 tga-tc
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           7217 5 -     21137 tga-tc
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    5920 5 -     10723 tga-tc
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         5076 5 +      9834 tga-tc
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        23389 5 +     32220 tga-tc
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5937491 5 +   6242583 tga-tc
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        6744 5 +     20839 tga-tc
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2154816 5 +   4065304 tga-ct
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     8464 5 -     10553 tga-ct
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Varecia_rubra.k141_590885                                  10612 5 +     50397 tga-cc
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             10667 5 +     24756 tga-cc
i Varecia_variegata.k141_1128296                         C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        23254 4 -     24430 tga-c-
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      14119 5 +     63895 TGCTG-
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 50 C 0
e Echinops_telfairi.JH980293.1                            48779651 164 + 111700974 I
e Sapajus_macrocephalus.k141_351809                          54316 0 -     80660 C
e Sapajus_apella.ctg103                                    5419275 0 -   5703754 C
e Leontocebus_nigricollis.k141_4610752                        6136 0 +     35603 C
e Leontocebus_illigeri.k141_3350179                           3420 0 +      4941 C
e Leontocebus_fuscicollis.k141_1820339                        6093 0 +     64341 C
e Chiropotes_albinasus.k141_2813271                           9356 381 +     11226 I
e Cebus_unicolor.k141_219506                                 14903 0 -     16904 I
e Cebus_albifrons.Contig27                                25650611 0 +  26074798 C
e Mus_pahari.LT608297.1                                   31353515 705 -  89631738 I
e Mus_spretus.CM004101.1                                  90750934 691 - 130317789 I
e Mus_musculus.chr8                                       87648857 707 - 129401213 I
e Mus_caroli.LT608237.1                                   84359872 692 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zalophus_californianus.ZalCal_flattened_line_17732          4349 55 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                  9981 55 -     43706 I
e Vicugna_pacos.KN270157.1                                 5371064 55 -   5488506 I
e Ursus_maritimus.KK499267.1                               4849611 55 -   5085361 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52652 8 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     80101 76 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   3761 0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937 0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    386403 55 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      117950 55 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 71325 110 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                 9779 70 +     41958 I
e Sus_scrofa.CM000828.4                                    6809663 77 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629              17502 55 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             29916 55 +     97271 I
e Sorex_araneus.JH798187.1                                13649852 60 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               2947 55 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11304 0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152480 8 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                86981 55 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rattus_norvegicus.chr16                                 53568931 910 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20273487 55 -  38429054 I
e Pteropus_vampyrus.KN525825.1                             1359049 55 +   4952924 I
e Pteropus_alecto.KB030862.1                              22975963 55 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         39415 55 +     42204 I
e Pteronotus_parnellii.KE909381.1                            13855 81 -     21811 I
e Psammomys_obesus.NESX01036370.1                             9107 499 -     21651 I
e Procavia_capensis.ProCapCap_scaffold_85530                 11991 249 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             1020 56 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813 0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18193469 497 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11828 55 -     78924 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4720208 55 -   8748460 I
e Panthera_pardus.KV860321.1                                263570 55 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  150365 55 +    230217 I
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       461535 55 -    559221 I
e Orycteropus_afer.OryAfe_flattened_line_144387               9003 16 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    78850 497 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   23879 792 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              505841 55 -   2017862 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Nyctereutes_procyonoides.CAJHUB010000658.1               9148567 55 -   9404916 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20306159 54 +  31847680 I
e Nannospalax_galili.KL204047.1                            2025215 7823 -   3037898 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187970 110 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33185 55 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902629 55 -   4330536 I
e Myotis_davidii.KB100139.1                                1586559 55 -   6019432 I
e Myotis_brandtii.KE162005.1                                278865 55 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               300393 55 -  14710649 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           5693 55 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   34613 55 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 140540 53 -    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         4903 55 -      8324 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             33502 55 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1849825 55 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                14559 88 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    20898 16 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12180961 469 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 31477 495 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365              9216 54 +     13704 I
e Megaderma_lyra.MegLyr_scaffold_4542                         9519 4280 -    207569 I
e Manis_pentadactyla.KN006162.1                              50341 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352 0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 89799 48 +     94391 I
e Lycaon_pictus.CM007581.1                                17954313 55 -  59628241 I
e Loxodonta_africana.GL010049.1                            4216156 234 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Leptonychotes_weddellii.KB714746.1                       3042035 55 +   3914936 I
e Lasiurus_borealis.LasBor_scaffold_50988                    12479 3019 +     29960 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547 0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  43658 55 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42403 64 +     43066 I
e Hipposideros_armiger.JXIK01000431.1                       110974 61 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_384612                 297 328 -       958 I
e Heterocephalus_glaber.JH602082.1                        20660051 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               241501 55 +    327341 I
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  8618 0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20195104 0 + 205367284 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Equus_przewalskii.KK951119.1                               32375 55 +    498745 I
e Equus_caballus.CM000403.2                               18530360 55 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1282539 55 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2144621 55 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16328499 55 -  41312741 I
e Ellobius_talpinus.LOJH01109367.1                            5126 789 -      6299 I
e Ellobius_lutescens.LOEQ01008920.1                          19045 777 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1089466 1162 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Eidolon_helvum.KE759718.1                                   9707 55 +     11740 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084 0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    5228 56 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  672475 56 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8629030 76 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            62473 5 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             27664 55 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_37019               1802 50 -     19598 I
e Cricetulus_griseus.LT883664.1                           11666269 486 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 48834 457 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          13502 50 -     20389 I
e Condylura_cristata.JH655891.1                           17547413 8 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            172152 108 +    839153 I
e Choloepus_didactylus.ChoDid_scaffold_45914                 17052 108 +     19366 I
e Chinchilla_lanigera.JH722012.1                           1251498 0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_713168             206 0 -      2554 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1652 56 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99291 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157 0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     92176 78 +    217609 I
e Castor_canadensis.CasCan_scaffold_2074                    136755 0 +    179628 C
e Carollia_perspicillata.CarPer_scaffold_92756                4014 76 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18499585 55 +  63665305 I
e Canis_lupus_familiaris.chr16                            17958073 55 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9033808 55 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    184422 55 -    185531 I
e CanFam4.chr16                                           17798365 55 -  60362399 I
e Camelus_ferus.KB017975.1                                  402319 55 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2334036 55 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10001578 55 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3651 76 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      184239 76 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Ailurus_fulgens.LNAC01001112.1                             78530 55 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9509749 55 -  29979442 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     69210 509 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           826486 55 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       5217 29 +     62944 ta-ctttagaggaaggtcag-a-gagtta-----ttt
s Acomys_cahirinus.AcoCah_scaffold_12655                     69719  7 +     87051 -------------------------ATCC-----TTT
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 509 I 22
s Allactaga_bullata.AllBul_scaffold_9566                     73846 28 -     89534 ta-cttcagaagaaa-gctg-a-gaatta-----ttt
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 44
s Allenopithecus_nigroviridis.k141_3361533                   13135 29 -     52922 ta-ctttagaggaaggtcag-a-gagttt-----ttt
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         13078 29 -     28001 ta-ctttagaggaaagtcag-a-gagtta-----ttt
i Allochrocebus_lhoesti.k141_4309873                     C 0 I 40
s Allochrocebus_preussi.k141_1442296                          3524 29 -     18505 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Allochrocebus_preussi.k141_1442296                     C 0 I 40
s Allochrocebus_solatus.k141_166128                           4373 29 -     12518 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Allochrocebus_solatus.k141_166128                      C 0 I 40
s Alouatta_belzebul.k141_3238538                              1932 29 -     27731 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                2060 29 +      3134 ta-ctttagaggaaggtcag-a-gggtta-----ttt
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               2192 29 -     45847 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                23397 29 +     25266 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           2582 29 +      2906 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            16695 29 -     18578 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              2084 29 +     47717 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             2211 29 -      3544 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             13432 29 +     50774 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  14057 29 -     33861 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Aotus_azarae.k141_3104676                              C 0 I 32
s Aotus_griseimembra.k141_2240599                            14077 29 -     34016 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Aotus_griseimembra.k141_2240599                        C 0 I 32
s Aotus_nancymaae.KZ198451.1                               4296474 29 -   5030052 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Aotus_nancymaae.KZ198451.1                             C 0 I 32
s Aotus_trivirgatus.k141_2152450                             14079 29 -     34685 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Aotus_trivirgatus.k141_2152450                         C 0 I 32
s Aotus_vociferans.k141_344750                               27203 29 -     47192 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Aotus_vociferans.k141_344750                           C 0 I 32
s Aplodontia_rufa.AprRuf_scaffold_68852                      11008 30 +     20879 ttcctctgaaggaagatcag-a-gaatta-----ttt
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       10508 29 +     14667 ta-cgttagagaaggCTCAG-A-AAGTTT-----TCT
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Avahi_laniger.k141_765380                                  52891 26 -     92717 ta-ctttagagga---cagg-a-aaattc-----ttt
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              53520 26 +     85213 ta-ctttagagga---cagg-a-aaattc-----ttt
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             3818 29 -     10423 tg-agttagaggaaggtcag-a-gagtta-----ttt
i Callibella_humilis.k141_1278103                        C 0 I 22
s Callimico_goeldii.k141_1091182                             23318 29 +     31915 tg-ctttagaggaaggtcag-a-gagtta-----ttt
i Callimico_goeldii.k141_1091182                         C 0 I 23
s Callithrix_geoffroyi.k119_512088                            3784 29 +      5267 tg-ctttagaggaaggtcag-a-gagtta-----ttt
i Callithrix_geoffroyi.k119_512088                       C 0 I 22
s Callithrix_jacchus.pat_scaffold_3                       23588998 29 - 189096842 tg-ctttagaggaaggtcag-a-gagtta-----ttt
i Callithrix_jacchus.pat_scaffold_3                      C 0 I 22
s Callithrix_kuhlii.k119_1164682                             10528 29 -     12001 tg-ctttagaggaaggtcag-a-gagtta-----ttt
i Callithrix_kuhlii.k119_1164682                         C 0 I 22
s Carlito_syrichta.NW_007247396.1                           200560 29 +    308752 GA-CTTTGGAGGAAGGTCAG-A-TCATGC-----TTT
i Carlito_syrichta.NW_007247396.1                        C 0 I 44
s Cebuella_niveiventris.k141_1251222                          8443 29 -     11392 tg-ctttagaggaaggtcag-a-gagata-----ttt
i Cebuella_niveiventris.k141_1251222                     C 0 I 22
s Cebuella_pygmaea.k141_1309012                               4541 29 -      7577 tg-ctttagaggaaggtcag-a-gagtta-----ttt
i Cebuella_pygmaea.k141_1309012                          C 0 I 22
s Cebus_olivaceus.k141_1000828                                2474 29 -      2944 ta-cttcagaggaagtttag-a-gagtta-----ttt
i Cebus_olivaceus.k141_1000828                           C 0 I 6
s Cephalopachus_bancanus.k141_1423433                         4575 29 +     31688 ag-ctttagaggaaggtcag-a-tcatgc-----ttt
i Cephalopachus_bancanus.k141_1423433                    C 0 I 44
s Cercocebus_atys.KQ010504.1                               4474088 29 +   4669795 ta-ctttagaggaaggtcag-A-GAGTTA-----TTT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        12637 29 -     19203 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           7059 29 +      8260 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           7285 29 +     27781 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         7445 29 -     20310 ta-ctttagaggaaggtcag-a-gtgtta-----ttt
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          10424 29 +     29689 ta-ctttagaggaaggtcag-a-gtgtta-----ttt
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            4855 29 +      9989 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          13103 29 -     27936 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            1969 29 -     17152 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38815507 29 +  39242232 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21221198 29 -  21565898 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       38316 29 -     53127 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        5587 29 +      7159 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       13119 29 -     27947 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         13092 29 +     17596 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          2326 29 +     26000 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             20278 26 -     52598 ta-cgttagagga---tagg-a-aaattc-----ttt
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           15645 26 +     57038 ta-cgttagagga---tagg-a-aaattc-----ttt
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           9737 26 +     11226 ----tttaggggaaggtcag-a-gggtta-----ttt
i Chiropotes_albinasus.k141_2813271                      I 381 C 0
s Chlorocebus_aethiops.ctg25                              18427076 29 -  18827391 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       13513 29 -     50209 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135420513 29 + 135778131 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1909026 29 +   2368649 ta-ctttacaggaaggtcgg-a-gagtta-----ttt
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199948704 29 + 200372422 ta-ctttacaggaaggtcgg-a-gagtta-----ttt
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              35564 29 +     84244 ta-ctttacaggaaggtcgg-a-gagtta-----ttt
i Colobus_polykomos.k141_906115                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 49291  7 +     63868 -------------------------ATCC-----TTT
i Cricetomys_gambianus.CriGam_scaffold_18520             I 457 I 20
s Cricetulus_griseus.LT883664.1                           11666755  7 + 224834208 -------------------------ATCC-----TTT
i Cricetulus_griseus.LT883664.1                          I 486 I 21
s Ctenodactylus_gundi.CteGun_scaffold_65                    836325 29 +   1526836 ta-ctctgggggaagggaag-g-gaattc-----ttt
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 1 C 0
s Daubentonia_madagascariensis.ctg71                      12536519 29 -  12879189 ca-ctttagaggaggatcag-a-aaattc-----ttt
i Daubentonia_madagascariensis.ctg71                     C 0 I 13
s Ellobius_lutescens.LOEQ01008920.1                          90272  7 +    110024 -------------------------ATCC-----TTT
i Ellobius_lutescens.LOEQ01008920.1                      n 777 I 20
s Ellobius_talpinus.LOJH01109367.1                             454  7 +      6299 -------------------------atcc-----TTT
i Ellobius_talpinus.LOJH01109367.1                       n 789 I 20
s Erythrocebus_patas.Contig38                             21203684 29 -  21539334 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              12997 26 -     14127 ta-ctgtagaaga---cagg-a-aaattc-----ttt
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                5695 26 -     16928 ta-ctgtagaaga---cagg-a-aaattc-----ttt
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              14724 26 -     25546 ta-ctgtagaaga---cagg-a-aaattc-----ttt
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            11922 26 +     26330 ta-ctgtagaaga---cagg-a-aaattc-----ttt
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 13162 26 +     23973 ta-ctgtagaaga---cagg-a-aaattc-----ttt
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                11922 26 +     75513 ta-ctgtagaaga---cagg-a-aaattc-----ttt
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  9860 26 +     97555 ta-ctgtagaaga---cagg-a-aaattc-----ttt
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            12779 26 +     26496 ta-ctgtagaaga---cagg-a-aaattc-----ttt
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  3397 26 -     17153 ta-ctgtagaaga---cagg-a-aaattc-----ttt
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              12973 26 +    111500 ta-ctgtagaaga---cagg-a-aaattc-----ttt
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Galago_moholi.ctg2040                                     425455 29 -    453645 ta-ctttagaggaggctcag-A-AAATTC-----TCT
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             3162 29 +     11339 ta-ctttagaggaggctcag-a-aaattc-----tct
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                             465 29 +     41679 ta-ctttagaggaggcTCAG-A-AAATTC-----TCT
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840                307 29 -      9135 tg-ctttagaggaaggtcag-a-gaattc-----tct
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              14469 29 -     32273 ta-ctttagaggaaggtaag-a-gagtta-----ttt
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186336616 29 + 186649187 ta-ctttagaggaaggtaag-a-gagtta-----ttt
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6052 26 -     19426 ta-ctgtagaaga---cagg-a-aaattc-----ttt
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             11201 26 -     15286 ta-ctgtagaaga---cagg-a-aaattc-----ttt
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             12840 26 +     18253 ta-ctgtagaaga---cagg-a-aaattc-----ttt
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         12941 26 -     41752 ta-ctgtagaaga---cagg-a-aaattc-----ttt
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         12779 26 -     16460 ta-ctgtagaaga---cagg-a-aaattc-----ttt
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Hoolock_leuconedys.ctg274                                    433284 29 +    630532 ta-ctttagaggaagatcag-a-gagtta-----ttt
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_232023                                1050 29 -     12752 ta-ctttagaggaagatcag-a-gagtta-----ttt
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                               1094 29 +     14092 ta-ctttagaggaagatcag-a-gagtta-----ttt
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189541877 29 - 191637585 ta-ctttagaggaagatcag-a-gagtta-----ttt
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3334771 29 -  11177569 ta-ctttagaggaagatcag-a-gagtta-----ttt
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7519077 29 -   7955117 ta-ctttgaagaaagattag-a-gaatta-----ttt
i Ictidomys_tridecemlineatus.JH393364.1                  I 1 C 0
s Indri_indri.k141_3655594                                   21744 26 +     31101 ta-ctttagagga---tagg-a-aaattc-----ttt
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15523284 26 -  30322482 ga-ttgtagaaga---cagg-a-aaattc-----ttt
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        6093 22 +     64341 --------gaggaaggtcag-a-gagtta-----ttt
i Leontocebus_fuscicollis.k141_1820339                   C 0 I 22
s Leontocebus_illigeri.k141_3350179                           3420 22 +      4941 --------gaggaaggtcag-a-gagtta-----ttt
i Leontocebus_illigeri.k141_3350179                      C 0 I 22
s Leontocebus_nigricollis.k141_4610752                        6136 22 +     35603 --------gaggaaggtcag-a-gagtta-----ttt
i Leontocebus_nigricollis.k141_4610752                   C 0 I 22
s Leontopithecus_chrysomelas.k141_1519602                    27596 27 +     38576 tg-ctttagaggaaggtc---a-gagtta-----ttt
i Leontopithecus_chrysomelas.k141_1519602                C 0 I 22
s Leontopithecus_rosalia.k141_464620                         24293 27 +     66356 tg-ctttagaggaaggtc---a-gagtta-----ttt
i Leontopithecus_rosalia.k141_464620                     C 0 I 22
s Lepilemur_ankaranensis.k141_596936                         10168 26 -     23766 ta-tgttagagga---taag-a-aaattc-----ttt
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             28234 26 +     45836 ta-tgttagagga---taag-a-aaattc-----ttt
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                           779 26 +     25010 ta-cgttagagga---taag-a-aaattc-----ttt
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      26170 26 +     54090 ta-tgttagagga---taag-a-aaattc-----ttt
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     5090 29 -     14121 TG-CTTCAGAGAAAGATTAT-A-GAATTC-----TCT
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 327
s Lophocebus_aterrimus.ctg367                              1435635 29 +   1826925 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            4845 29 +     11245 ca-cgtTACAGGAGGCTCAG-A-AAATTC-----TCT
i Loris_lydekkerianus.k141_2539221                       I 211 C 0
s Loris_tardigradus.ctg83                                  1003695 29 +   6120653 ca-cgtTACAGGAAGCTCAG-A-AAATTC-----TCT
i Loris_tardigradus.ctg83                                I 211 C 0
s Macaca_arctoides.k141_2326796                               5450 29 +     40492 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59674712 29 +  60120075 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 11227 29 -     26193 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            79010 29 -    114318 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  4707 29 -     23192 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                14169 29 -     29190 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  22734 29 +     37952 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186837825 29 + 187317192 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25456386 29 -  25927173 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  78585 29 +     89720 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 5583 29 +     20474 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   5383 29 -     14993 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  328254 29 -    668171 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 3695 29 -     24072 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               24322 29 -     45290 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23935908 29 -  24302211 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               350039 28 +    752769 ta-ctttagagga-ggtcag-a-gagtta-----ttt
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33101386 29 -  40650429 ta-ctttgaagaaagatcag-a-gaatta-----ttt
i Marmota_marmota.CZRN01000018.1                         I 1 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 31972  7 +    140813 -------------------------atcg-----ttt
i Meriones_unguiculatus.MerUng_scaffold_7390             I 495 I 21
s Mesocricetus_auratus.KB708134.1                         12181430  7 -  29670104 -------------------------ATCG-----CTT
i Mesocricetus_auratus.KB708134.1                        I 469 I 21
s Mico_argentatus.k141_1239457                                4358 29 -      7380 tg-ctttagaggaaggtcag-a-gagtta-----ttt
i Mico_argentatus.k141_1239457                           C 0 I 22
s Mico_humeralifer.k141_1976199                               3431 29 +     18990 tg-ctttagaggaaggtcag-a-gagtta-----ttt
i Mico_humeralifer.k141_1976199                          C 0 I 22
s Mico_schneideri.k141_1950671                                      4370 29 -      7356 tg-ctttagaggaaggtcag-a-gagtta-----ttt
i Mico_schneideri.k141_1950671                                 C 0 I 22
s Microcebus_murinus.CM007674.1                           18290683 26 -  93316391 TA-CGTTAGAGAA---TAGG-A-AAACTC-----TTT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_534055                           7633 29 -     28506 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirza_zaza.k141_952172                                      8234 26 -     37649 ta-agttagagga---tagg-a-aaattc-----ttt
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mus_caroli.LT608237.1                                   84360564  7 - 120012414 -------------------------ATCC-----TTT
i Mus_caroli.LT608237.1                                  I 692 I 42
s Mus_musculus.chr8                                       87649564  7 - 129401213 -------------------------ATCC-----TTT
i Mus_musculus.chr8                                      I 707 I 42
s Mus_pahari.LT608297.1                                   31354220  7 -  89631738 -------------------------atct-----ttt
i Mus_pahari.LT608297.1                                  I 705 I 42
s Mus_spretus.CM004101.1                                  90751625  7 - 130317789 -------------------------ATCC-----TTT
i Mus_spretus.CM004101.1                                 I 691 I 42
s Nannospalax_galili.KL204047.1                            2033038 19 -   3037898 -----------GAAAGTCAG-A-GAATTC-----TTT
i Nannospalax_galili.KL204047.1                          I 7823 I 23
s Nasalis_larvatus.k141_413338                               13628 29 +     21681 tg-ctttagaggaaggtcag-g-gagtta-----ttt
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nycticebus_bengalensis.LG01                            102578668 29 - 196305487 ta-cattagagGAGGCTCAG-A-AAATTC-----TCT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_771082                               513 29 -      2667 ta-catTAGAGGAGGCTCAG-A-AAATTC-----TCT
i Nycticebus_coucang.k141_771082                         C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749089 29 + 199412804 ta-cattagaggaggctCAG-A-AAATTC-----TCT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1362206 29 +   3988456 TA-CTTTAGAGAAAGATCAG-A-GAATTC-----TTG
i Ochotona_princeps.JH802162.1                           C 0 I 334
s Ondatra_zibethicus.OndZib_scaffold_46174                    3452  7 -     28053 -------------------------ATCC-----TTC
i Ondatra_zibethicus.OndZib_scaffold_46174               n 792 I 20
s Onychomys_torridus.OnyTor_scaffold_2986                    79347  7 +    102263 -------------------------ATTC-----TTT
i Onychomys_torridus.OnyTor_scaffold_2986                I 497 I 19
s Oryctolagus_cuniculus.CM000791.1                        67145933 29 + 174332312 TA-CTTCAGAGAAAGATTAC-A-GAATTC-----TCt
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 313
s Otolemur_crassicaudatus.k141_222918                         2993 29 +      8798 ta-CTTTAGAGGAGGCTCAG-A-AAATTC-----TCT
i Otolemur_crassicaudatus.k141_222918                    C 0 I 37
s Otolemur_garnettii.GL873799.1                             695157 29 -   1103335 TA-CTTTAGAGGAGGCTCAG-A-AAATTC-----TCT
i Otolemur_garnettii.GL873799.1                          C 0 I 37
s Pan_paniscus.KQ411613.1                                    42564 29 +     80009 ta-ctttagaGGAAGGTCAG-A-GAGTTA-----TTT
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03001836.1                             28489 29 +     51860 ta-ctttagaGGAAGGTCAG-A-GAGTTA-----TTT
i Pan_troglodytes.NBAG03001836.1                         I 362 C 0
s Papio_anubis.CM001495.2                                183441662 29 + 183742232 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             5356 29 +     20448 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20562164 29 +  20919399 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   4100 29 +     41871 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     7385 29 +     27711 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  7463 29 +      9205 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Papio_ursinus.k141_3428135                             C 0 C 0
s Perodicticus_ibeanus.k141_855320                            9137 29 +     13100 ta-tgttagaggaggctcag-a-aAATTC-----TCT
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             7539 29 +     25941 ta-tgttagaggaggctcag-a-aAATTC-----TCT
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18193966  7 -  18517816 -------------------------atcc-----ttt
i Peromyscus_maniculatus.KI615324.1                      I 497 I 21
s Piliocolobus_badius.k141_1234363                           42124 29 +     62158 ta-ctttagaggaaggtcgg-a-gagtta-----ttt
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        36855 29 +     89929 ta-ctttagaggaaggtcgg-a-gagtta-----ttt
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            38271 29 +     51399 ta-ctttagaggaaggtcgg-a-gagtta-----ttt
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14294509 29 -  14605196 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189129607 29 + 189387572 ta-ctttagaggaagatcag-a-gagtta-----ttt
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9569215 29 +   9816681 ta-ctttagaggaagatcag-a-gagtta-----ttt
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               71796 29 -     81375 tg-ctttagaggaaggtcag-a-gagtta-----ttt
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              3616 29 +     19060 tg-ctttagaggaaggtcag-a-gagtta-----ttt
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2595962 26 -   4620579 TA-CTGTAGAAGA---CAGG-A-AAATTC-----TTT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     989932 26 +   2598838 ta-ctttagagga---TAGG-A-AAATTc-----ttt
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          28242 26 +     38485 tc-ctttagagga---tagg-a-aaattc-----ttt
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                               287 26 -     13098 ta-ctttagagga---tagg-a-aaattc-----ttt
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          25769 26 +     35766 ta-ctttagagga---tagg-a-aaattc-----ttt
i Propithecus_edwardsi.k141_1176054                      C 0 I 24
s Propithecus_perrieri.k141_1200571                           3951 26 -     24134 ta-ctttagagga---taag-a-aaattc-----ttt
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        27773 26 -     67325 ta-ctttagagga---tagg-a-aaattc-----ttt
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           3995 26 -      6182 ta-ctttagagga---tagg-a-aaattc-----ttt
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             9606  7 -     21651 -------------------------ATCC-----TTT
i Psammomys_obesus.NESX01036370.1                        I 499 I 21
s Pygathrix_cinerea.k141_1153803                             13627 29 -     91421 tg-ctttagaggaaggtcag-a-gagtta-----ttt
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7607753 29 +   7812017 tg-ctttagaggaaggtcag-a-gagtta-----ttt
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             13601 29 -     72585 tg-ctttagaggaaggtcag-a-gagtta-----ttt
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53569841  7 +  90668790 -------------------------ATCC-----TTT
i Rattus_norvegicus.chr16                                I 910 I 38
s Rhinopithecus_bieti.k119_217274                             5316 29 -     11128 tg-ctttagaggaaggtcag-a-gagtta-----ttt
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91234676 29 - 195417433 tg-ctttagaggaaggtcag-a-gagtta-----ttt
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7670321 29 +   7961872 tg-ctttagaggaaggtcag-a-gagtta-----ttt
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_2619299                               6797 29 -      8359 tg-ctttaggggaaggtcag-a-gggtta-----ttt
i Saguinus_bicolor.k141_2619299                          C 0 I 28
s Saguinus_imperator.k141_2524406                              738 29 +      2197 tg-ctttaggggaaggtcag-a-ggctta-----ttt
i Saguinus_imperator.k141_2524406                        C 0 I 28
s Saguinus_inustus.k141_699149                               12160 29 +     13640 tg-ctttaggggaaggtcag-a-gggtta-----ttt
i Saguinus_inustus.k141_699149                           C 0 I 28
s Saguinus_labiatus.k141_285685                               7022 29 +      8564 tg-ctttaggggaaggtcag-a-gggtta-----ttt
i Saguinus_labiatus.k141_285685                          C 0 I 30
s Saguinus_midas.LG03                                    209467872 29 + 209938924 tg-ctttaggggaaggtcgg-a-gagtta-----ttt
i Saguinus_midas.LG03                                    C 0 I 28
s Saguinus_mystax.k141_374627                                 6586 29 -      9399 tg-ctttaggggaaggtcag-a-gggtta-----ttt
i Saguinus_mystax.k141_374627                            C 0 I 28
s Saimiri_boliviensis.NW_024100920.1                     119949829 29 - 121099817 ta-cttcagaggaaggtcag-a-gagtta-----ttt
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       22285 29 +     46362 ta-cttcagaggaaggtcag-a-gagtta-----ttt
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               22380 29 +     45824 ta-cttcagaggaaggtcag-a-gagtta-----ttt
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             39008 29 -     64574 ta-cttcagaggaaggtcag-a-gagtta-----ttt
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               2014 29 -     23631 ta-cttcagaggaaggtcag-a-gagtta-----ttt
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 22273 29 -     61129 ta-cttcagaggaaggtcag-a-gagtta-----ttt
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Semnopithecus_entellus.k141_11662                          18133 29 -     19888 tg-ctttagaggaaggtcag-a-gagtta-----ttt
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      25336 29 +     39453 tg-ctttagaggaaggtcag-a-gagtta-----ttt
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            5855 29 +     27826 tg-ctttagaggaaggtcag-a-gagtta-----ttt
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             5375 29 -     19483 tg-ctttagaggaaggtcag-a-gagtta-----ttt
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      5444 29 +      7198 tg-ctttagaggaaggtcag-a-gagtta-----ttt
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         13697 34 +     15514 tg-ctttagaggaaggtcag-a-gagttactctattt
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1952274 29 -   3870691 ta-ctttgaagaaagattag-a-gaatta-----ttt
i Spermophilus_dauricus.KZ294078.1                       I 1 C 0
s Symphalangus_syndactylus.tarseq_199                      1091919 29 -   1523678 ta-ctttagaggaagatcag-a-gagtta-----ttt
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_2201908                               25568 29 +     70052 ta-ctttggaggaaggtcag-a-tcatac-----ttt
i Tarsius_lariang.k141_2201908                           C 0 I 44
s Tarsius_wallacei.k141_254427                                 403 29 -     16117 ta-ctttggaggaaggtcag-a-tcattc-----ttt
i Tarsius_wallacei.k141_254427                           C 0 I 44
s Theropithecus_gelada.CM009954.1                        186427028 29 + 186847797 ta-ctttagaggaaggtcag-a-gagtta-----ttt
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          9427 29 -     20410 tg-ctttagaggaaggtcag-a-gagtta-----ttt
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    13623 29 +     15221 tg-ctttagaggaaggtcag-a-gagtta-----ttt
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        9528 29 +     19930 tg-ctttagaggaaggtcag-a-gagtta-----ttt
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       5955 29 -     19997 tg-ctttagaggaaggtcag-a-gagtta-----ttt
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            46084 29 -     60166 tg-ctttagaggaaggtcag-a-gagtta-----ttt
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        13550 29 -     27529 tg-ctttagaggaaggtcag-a-gagttg-----ttt
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     13494 29 -     18194 tg-ctttagaggaaggtcag-a-gagtta-----ttt
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           7222 29 -     21137 tg-ctttagaggaaggtcag-a-gagtta-----ttt
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    5925 29 -     10723 tg-ctttagaggaaggtcag-a-gagtta-----ttt
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         5081 29 +      9834 tg-ctttagaggaaggtcag-a-gagtta-----ttt
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        23394 29 +     32220 tg-ctttagaggaaggtcag-a-gagtta-----ttt
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5937496 29 +   6242583 tg-ctttagaggaaggtcag-a-gagtta-----ttt
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        6749 29 +     20839 tg-ctttagaggaaggtcag-a-gagtta-----ttt
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2154821  4 +   4065304 ta-ct--------------------------------
i Tupaia_chinensis.KB320699.1                            C 0 I 29
s Tupaia_tana.TupTan_flattened_line_97126                     8469  4 -     10553 ta-ct--------------------------------
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 29
s Varecia_rubra.k141_590885                                  10617 26 +     50397 aa-ctgtagaaga---cagg-a-aacttc-----ttt
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             10672 26 +     24756 aa-ctgtagaaga---cagg-a-aacttc-----ttt
i Varecia_variegata.k141_1128296                         C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        23258 29 -     24430 ta-ctttgaagaaaggtcag-a-gaatta-----ttt
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      14124 29 +     63895 TA-TTTCAGAAGAAA-GCTGGA-GAGTCC-----CTT
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 44
e Echinops_telfairi.JH980293.1                            48779651 164 + 111700974 I
e Sapajus_macrocephalus.k141_351809                          54316  0 -     80660 C
e Sapajus_apella.ctg103                                    5419275  0 -   5703754 C
e Cebus_unicolor.k141_219506                                 14903  0 -     16904 I
e Cebus_albifrons.Contig27                                25650611  0 +  26074798 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zalophus_californianus.ZalCal_flattened_line_17732          4349 55 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                  9981 55 -     43706 I
e Vicugna_pacos.KN270157.1                                 5371064 55 -   5488506 I
e Ursus_maritimus.KK499267.1                               4849611 55 -   5085361 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52652  8 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     80101 76 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   3761  0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    386403 55 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      117950 55 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 71325 110 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                 9779 70 +     41958 I
e Sus_scrofa.CM000828.4                                    6809663 77 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629              17502 55 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             29916 55 +     97271 I
e Sorex_araneus.JH798187.1                                13649852 60 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               2947 55 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11304  0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152480  8 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                86981 55 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482 20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20273487 55 -  38429054 I
e Pteropus_vampyrus.KN525825.1                             1359049 55 +   4952924 I
e Pteropus_alecto.KB030862.1                              22975963 55 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         39415 55 +     42204 I
e Pteronotus_parnellii.KE909381.1                            13855 81 -     21811 I
e Procavia_capensis.ProCapCap_scaffold_85530                 11991 249 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             1020 56 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11828 55 -     78924 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Panthera_tigris.KE722367.1                               4720208 55 -   8748460 I
e Panthera_pardus.KV860321.1                                263570 55 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  150365 55 +    230217 I
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       461535 55 -    559221 I
e Orycteropus_afer.OryAfe_flattened_line_144387               9003 16 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              505841 55 -   2017862 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Nyctereutes_procyonoides.CAJHUB010000658.1               9148567 55 -   9404916 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20306159 54 +  31847680 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187970 110 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33185 55 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902629 55 -   4330536 I
e Myotis_davidii.KB100139.1                                1586559 55 -   6019432 I
e Myotis_brandtii.KE162005.1                                278865 55 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               300393 55 -  14710649 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           5693 55 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   34613 55 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 140540 53 -    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         4903 55 -      8324 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             33502 55 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1849825 55 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                14559 88 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    20898 16 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mellivora_capensis.MelCap_flattened_line_69365              9216 54 +     13704 I
e Megaderma_lyra.MegLyr_scaffold_4542                         9519 4280 -    207569 I
e Manis_pentadactyla.KN006162.1                              50341  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352  0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 89799 48 +     94391 I
e Lycaon_pictus.CM007581.1                                17954313 55 -  59628241 I
e Loxodonta_africana.GL010049.1                            4216156 234 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Leptonychotes_weddellii.KB714746.1                       3042035 55 +   3914936 I
e Lasiurus_borealis.LasBor_scaffold_50988                    12479 3019 +     29960 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  43658 55 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42403 64 +     43066 I
e Hipposideros_armiger.JXIK01000431.1                       110974 61 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_384612                 297 328 -       958 I
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               241501 55 +    327341 I
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  8618  0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20195104  0 + 205367284 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Equus_przewalskii.KK951119.1                               32375 55 +    498745 I
e Equus_caballus.CM000403.2                               18530360 55 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1282539 55 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2144621 55 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16328499 55 -  41312741 I
e Elephantulus_edwardii.JH947257.1                         1089466 1162 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Eidolon_helvum.KE759718.1                                   9707 55 +     11740 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    5228 56 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  672475 56 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8629030 76 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            62473  5 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             27664 55 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_37019               1802 50 -     19598 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          13502 50 -     20389 I
e Condylura_cristata.JH655891.1                           17547413  8 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            172152 108 +    839153 I
e Choloepus_didactylus.ChoDid_scaffold_45914                 17052 108 +     19366 I
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_713168             206  0 -      2554 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1652 56 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     92176 78 +    217609 I
e Castor_canadensis.CasCan_scaffold_2074                    136755  0 +    179628 C
e Carollia_perspicillata.CarPer_scaffold_92756                4014 76 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18499585 55 +  63665305 I
e Canis_lupus_familiaris.chr16                            17958073 55 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9033808 55 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    184422 55 -    185531 I
e CanFam4.chr16                                           17798365 55 -  60362399 I
e Camelus_ferus.KB017975.1                                  402319 55 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2334036 55 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10001578 55 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3651 76 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      184239 76 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Ailurus_fulgens.LNAC01001112.1                             78530 55 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9509749 55 -  29979442 I
e Acinonyx_jubatus.LLWD01001279.1                           826486 55 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       5246 114 +     62944 t-atgacctgtttcatg-------ggag----------a--cgag-caag-ga-aaggt---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgcca-t-------ttccccaagtgccaaggtaacgtattt---tggg---gtagta-----tatcaa-gaaccc-G------TC
s Acomys_cahirinus.AcoCah_scaffold_12655                     69748  57 +     87051 ------------------------------------------------------------------------------------------------G-TG-CCT-T-TTCTATT-CTAT-TGT-------TTCCTCAAATGCTAATGTATCATATT----TGGT---GACAAG----------------------------
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 22 I 4
s Allactaga_bullata.AllBul_scaffold_9566                     73918  39 -     89534 ----------------------------------------------------------------------------------------------------------------------T--GT-------TTCTTCAAATGCTAAGGTGTCATATT----TGGA---GTAACA----------------------------
i Allactaga_bullata.AllBul_scaffold_9566                 I 44 I 12
s Allenopithecus_nigroviridis.k141_3361533                   13164 116 -     52922 t-atgacctgtttcatg-------ggag----------a--cgag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtcgtg-----tatcca-gaaccccg------tc
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         13147  74 -     28001 -------------------------------------------------------------------------------------------------tga-cct-t-tctgcat-ctgcca-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtcgta-----tatcca-gaaccccg------tc
i Allochrocebus_lhoesti.k141_4309873                     I 40 C 0
s Allochrocebus_preussi.k141_1442296                          3593  74 -     18505 -------------------------------------------------------------------------------------------------tga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtcgta-----tatcca-gaaccccg------tc
i Allochrocebus_preussi.k141_1442296                     I 40 C 0
s Allochrocebus_solatus.k141_166128                           4442  74 -     12518 -------------------------------------------------------------------------------------------------tga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtcgta-----tatcca-gaaccccg------tc
i Allochrocebus_solatus.k141_166128                      I 40 C 0
s Alouatta_belzebul.k141_3238538                              1961 116 -     27731 t-atggcctgtttcgtg-------ggag----------a--tgag-caag-gggaaggt---------------g--ag-a---------------gtga-cct-t-tctgcgt-ctgccg-c-------ttcctcaaatgccaaggtgtcgtgttt---tggg---gtagta-----taccca-gaaccccg------tc
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                2089 116 +      3134 t-atggcctgtttcgtg-------ggag----------a--tgag-caag-gggaaggt---------------g--ag-a---------------gtga-cct-t-tctgcgt-ctcccg-c-------ttcctcaaatgccaaggtgtcgtgttt---tggg---gtagta-----taccca-gaaccccg------tc
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               2221 116 -     45847 t-atggcctgtttcgtg-------ggag----------a--tgag-caag-gggaaggt---------------g--ag-a---------------gtga-cct-t-tctgcgt-ctgccg-c-------ttcctcaaatgccaaggtgtcgtgttt---tggg---gtagta-----taccca-gaaccccg------tc
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                23426 116 +     25266 t-atggcctgtttcgtg-------ggag----------a--tgag-caag-gggaaggt---------------g--ac-a---------------gtga-cct-t-tctgcat-ctgccg-c-------ttcctcaaatgccaaggtgtcgtgttt---tggg---gtagta-----taccca-gaaccccg------tc
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           2611 116 +      2906 t-atggcctgtttcgtg-------ggag----------a--tgag-caag-gggaaggt---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-c-------ttcctcaaatgccaaggtgtcgtgttt---tggg---gtagta-----taccca-gaaccccg------tc
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            16724 116 -     18578 t-atggcctgtttcgtg-------ggag----------a--tgag-caag-gggaaggt---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-c-------ttcctcaaatgccaaggtgtcgtgttt---tggg---gtagta-----taccca-gaaccccg------tc
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              2113 116 +     47717 t-atggcctgtttcatg-------ggag----------a--tgag-caag-gggaaggt---------------g--ag-a---------------gtga-cct-t-tctgcgt-ctgcca-c-------ttcctcaaatgccaaggtgtcgtgttt---tggg---gtagta-----taccca-gaacccca------tc
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             2240 116 -      3544 t-atggcctgtttcgtg-------agac----------a--tgag-caag-gggaaggt---------------g--ac-a---------------gtga-cct-t-tctgcat-ctgccg-c-------ttcctcaaatgccaaggtgtcgtgttt---tggg---gtagta-----taccca-gaaccccg------tc
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             13461 116 +     50774 t-atggcctgtttcgtg-------ggag----------a--tgag-caag-gggaaggt---------------g--ac-a---------------gtga-cct-t-tctgcat-ctgccg-c-------ttcctcaaatgccaaggtgtcgtgttt---tggg---gtagta-----taccca-gaaccccg------tc
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  14118  84 -     33861 ------------------------------------------------------aaggt---------------g--ag-g---------------gtga-cct-t-tctgcat-ctgccg-c-------ttcctcaaatgccaaggtaacgtgTTT---GGGG---GTACTA-----TATCCA-GAACCCCA------TC
i Aotus_azarae.k141_3104676                              I 32 C 0
s Aotus_griseimembra.k141_2240599                            14138  84 -     34016 ------------------------------------------------------aaggt---------------g--ag-g---------------gtga-cct-t-tctgcat-ctgccg-c-------ttcctcaaatgccaaggtaacgtgTTT---GGGG---GTACTA-----TATCCA-GAACCCCA------TC
i Aotus_griseimembra.k141_2240599                        I 32 C 0
s Aotus_nancymaae.KZ198451.1                               4296535  84 -   5030052 ------------------------------------------------------aaggt---------------g--ag-g---------------gtga-cct-t-tctgcat-ctgccg-c-------ttcctcaaatgccaaggtaacgtgttt---gggg---gtacta-----tatcca-gaacccca------tc
i Aotus_nancymaae.KZ198451.1                             I 32 C 0
s Aotus_trivirgatus.k141_2152450                             14140  84 -     34685 ------------------------------------------------------aaggt---------------g--ag-g---------------gtga-cct-t-tctgcat-ctgccg-c-------ttcctcaaatgccaaggtaacgtgTTT---GGGG---GTACTA-----TATCCA-GAACCCCA------TC
i Aotus_trivirgatus.k141_2152450                         I 32 C 0
s Aotus_vociferans.k141_344750                               27264  84 -     47192 ------------------------------------------------------aaggt---------------g--ag-g---------------gtga-cct-t-tctgcat-ctgccg-c-------ttcctcaaatgccaaggtaacgtgTTT---GGGG---GTACTA-----TATCCA-GAACCCCA------TC
i Aotus_vociferans.k141_344750                           I 32 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      11038 101 +     20879 t-ttgaccaactcAAGG-------GGAG----------A----AG-ACAAGAAGAAAGT---------------A--AC-A---------------G-TG-GTCTT-CCTGTTC-TGAT-G-C-------TTCTTCAAATCCTTAAGTGGCCATTTTTTTAAGC---ATAGCA----------------------------
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 4
s Arctocebus_calabarensis.k141_2318572                       10537 115 +     14667 G-ATGGACTGCTTCAGG-------GGTC----------T--AG-C-TCAG-GAGAAGAC---------------A--AG-A---------------GAAAACTT-T-CCTACTT-CTCCTG-T-------TTTTTCAAATGCCAAGGAACC--ATTC---TGAA---ATAGCA-----TATCCAAGAATCCCA------TA
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Avahi_laniger.k141_765380                                  52917 116 -     92717 t-atggcctgcttcaag-------ggag----------a--agga-gaag-gggaagat---------------g--ag-a---------------gaaa-cct-t-cctactt-ctccag-t-------ttcttccaatgccaaggtcccatattc---tgaa---gtagca-----tatcca-gaacccca------tc
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              53546 116 +     85213 t-atggcctgcttcaag-------ggag----------a--aggg-gaag-gggaagat---------------g--ag-a---------------gaaa-cct-t-cctaCTT-CTCCAG-T-------TTCTTCCAATGCCAAGGTCCCATATTC---TGAA---GTAGCA-----TATCCA-GAATCCCA------TC
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             3869  95 -     10423 --------------------------------------------------------g-----------------g--ag-caagaggaaggtgagagtga-cct-t-tctgcat-ctgcca-c-------ttcctcagatgccAAGGTCACGTGTTT---TGGG---GTACTC-----TATCCA-GAACCGAG------TC
i Callibella_humilis.k141_1278103                        I 22 C 0
s Callimico_goeldii.k141_1091182                             23370  79 +     31915 --------------------------------------------------------g-----------------g--ag-c---------------aagg-gta-a-ggtgaga-gtgac--c-------ttcctCAAATGCCAAGGTCACGTGTTT---CGGG---GTACTC-----TATCCA-GAACCCCG------TC
i Callimico_goeldii.k141_1091182                         I 23 C 0
s Callithrix_geoffroyi.k119_512088                            3835  95 +      5267 --------------------------------------------------------g-----------------g--ag-caagaggaaggtgagagtga-cct-t-tctgcat-ctgccg-c-------ttcctcagatgccAAGGTCACGTGTTT---CGGG---GTACTC-----TATCCA-GAACCGAG------TC
i Callithrix_geoffroyi.k119_512088                       I 22 C 0
s Callithrix_jacchus.pat_scaffold_3                       23589049  95 - 189096842 --------------------------------------------------------g-----------------g--ag-caagaggaaggtgagagtga-cct-t-tctgcat-ctgccg-c-------ttcctcagatgccaaggtcacctgttt---tggg---gtactc-----tatcca-gaaccGAG------TC
i Callithrix_jacchus.pat_scaffold_3                      I 22 C 0
s Callithrix_kuhlii.k119_1164682                             10579  95 -     12001 --------------------------------------------------------g-----------------g--ag-caagaggaaggtgagagtga-cct-t-tctgcat-ctgccg-c-------ttcctcagatgccAAGGTCACCTGTTT---TGGG---GTACTC-----TATCCA-GAACCGAG------TC
i Callithrix_kuhlii.k119_1164682                         I 22 C 0
s Carlito_syrichta.NW_007247396.1                           200633  43 +    308752 ---------------------------------------------------------------------------------------------------------------------------------------------CCAAGATGTCATATTT---TGGGA--GTAGCA-----TGTCCA-GAACTCCA------TC
i Carlito_syrichta.NW_007247396.1                        I 44 C 0
s Cebuella_niveiventris.k141_1251222                          8494  95 -     11392 --------------------------------------------------------g-----------------g--ag-gaagaggaaggtgagagtga-cct-t-tctgcat-ctgccg-c-------ttcctcagatgccAAGGTCACGCGTTT---CGGG---GTACTC-----TATCCA-GAACTGAG------TC
i Cebuella_niveiventris.k141_1251222                     I 22 C 0
s Cebuella_pygmaea.k141_1309012                               4592  95 -      7577 --------------------------------------------------------g-----------------g--ag-caagaggaaggtgagagtga-cct-t-tctgcat-ctgccg-c-------ttcctcagatgccAAGGTCACGTGTTT---CGGG---GTACTC-----TATCCA-GAACCGAG------TT
i Cebuella_pygmaea.k141_1309012                          I 22 C 0
s Castor_canadensis.CasCan_scaffold_2074                    136755   3 +    179628 -------------------------CAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Cebus_albifrons.Contig27                                25650611 100 +  26074798 ------------------------GGAG----------A--TGAG-CAAG-GGGAAGGT---------------G--AG-T---------------GTGA-CCT-T-TCTGCAT-CTGCCG-C-------TTCCTCAAATGCCAAGGTAACGTGCTT---TGGG---GTACTA-----GATCCA-GAACCCCG------TC
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_398305                                  188 100 +      1777 ------------------------GGAG----------A--TGAG-CAAG-GGGAAGGT---------------G--AG-T---------------GTGA-CCT-T-TCTGCAT-CTGCCG-C-------TTCCTCAAATGCCAAGGTAACGTGCTT---TGGG---GTACTA-----GATCCA-GAACCCCG------TC
i Cebus_olivaceus.k141_398305                            C 0 C 0
s Cebus_unicolor.k141_544048                                 48519 100 -     74725 ------------------------GGAG----------A--TGAG-Caag-gggaaggt---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-c-------ttcctcaaatgccAAGGTAACGTGCTT---TGGG---GTACTA-----GATCCA-GAACCCCG------TC
i Cebus_unicolor.k141_544048                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         4648  43 +     31688 ---------------------------------------------------------------------------------------------------------------------------------------------cCAAGGTGTCATATTT---TGGGA--GCAGCA-----TGTCCA-AAACTCCA------TC
i Cephalopachus_bancanus.k141_1423433                    I 44 C 0
s Cercocebus_atys.KQ010504.1                               4474117 116 +   4669795 T-ATGACCTGTTTCATG-------GGAG----------A--Cgag-caag-gggaagga---------------g--ag-a---------------gtga-CCT-T-TCTGCAT-CTGCCG-T-------TTCCTCAAATGCCAAAGTAACATATTT---TGGA---GTCGTA-----CATCCA-AAACCCCG------TC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        12666 116 -     19203 t-atgacctgtttcatg-------ggag----------a--cgag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtcgta-----tatcca-gaaccccg------tc
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           7088 116 +      8260 t-atgacctgtttcatg-------ggag----------a--cgag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtcgta-----tatcca-gaaccccg------tc
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           7314 116 +     27781 t-atgatctgtttcatg-------ggag----------a--cgag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtcgta-----tatcca-gaaccccg------tc
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         7474 116 -     20310 t-atgacctgtttcatg-------ggag----------a--cgag-caag-gggaagga---------------g--ag-a---------------ggga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacacattt---tgga---gtcgta-----tatcca-gaaccccg------tc
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          10453 116 +     29689 t-atgacctgtttcatg-------ggag----------a--cgag-caag-gggaagga---------------g--ag-a---------------ggga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacacattt---tgga---gtcgta-----tatcca-gaaccccg------tc
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            4884 116 +      9989 t-atgacctgtttcatg-------ggcg----------a--cgag-caag-gggaagga---------------g--ag-a---------------ggga-cct-t-tctgcat-ctgcca-t-------ttcctcaaatgccaaagtaacacattt---tgga---gtcgta-----gatcca-gaaccccg------tc
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          13132 116 -     27936 t-atgacctgtttcatg-------ggag----------a--cgag-caag-gggaagga---------------g--ag-a---------------ggga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtcgta-----gatcca-gaaccccg------tc
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            1998 116 -     17152 t-atgacctgtttcatg-------ggcg----------a--cgag-caag-gggaagga---------------g--ag-a---------------ggga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtcgta-----gatcca-gaacccca------tc
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38815536 116 +  39242232 t-atgacctgtttcatg-------ggag----------a--cgag-caag-gggaagga---------------g--ag-a---------------ggga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacacattt---tgga---gtcgta-----tatcca-gaaccccg------tc
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21221227 116 -  21565898 t-atgacctgtttcatg-------ggcg----------a--cgag-caag-gggaagga---------------g--ag-a---------------ggga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtcgta-----gatcca-gaacccca------tc
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       38345 116 -     53127 t-atgacctgtttcatg-------ggcg----------a--cgag-caag-gggaagga---------------g--ag-a---------------ggga-cct-t-tctgcat-ctgctg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtcgta-----gatcca-gaacccca------tc
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        5616 116 +      7159 t-atgacctgtttcatg-------ggag----------a--cgag-caag-gggaagga---------------g--ag-a---------------ggga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacacattt---tgga---gtcgta-----tatcca-gaaccccg------tc
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       13148 116 -     27947 t-atgacctgtttcatg-------ggcg----------a--cgag-caag-gggaagga---------------g--ag-a---------------ggga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtcgta-----gatcca-gaacccca------tc
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         13121 116 +     17596 t-atgacctgtttcatg-------ggcg----------a--cgag-caag-gggaagga---------------g--ag-a---------------ggga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtcgta-----gatcca-gaacccca------tc
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          2355 116 +     26000 t-atgacctatttcatg-------ggag----------a--cgag-caag-gggaagga---------------g--ag-a---------------ggga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacacattt---tgga---gtcgta-----gatcca-gaaccccg------tc
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             20304 116 -     52598 t-ctggcctgcttcagg-------ggag----------a--aggg-gaag-gggaagat---------------g--ag-a---------------gaga-cct-t-tctacgt-ctccaa-t-------ttcttccaatgtcaaggtcccatattc---tgaa---gtagct-----tatcca-gaacccca------TC
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           15671 116 +     57038 t-ctggcctgcttcagg-------ggag----------a--aggg-gaag-gggaagat---------------g--ag-a---------------gaga-cct-t-tctacgt-ctccaa-t-------ttcttccaatgtcaaggtcgcatattc---tgaa---gtagct-----tatcca-gaacccca------TC
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           9763  17 +     11226 t-atggcctgtttcatg-------g--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Chiropotes_albinasus.k141_2813271                      C 0 I 103
s Chlorocebus_aethiops.ctg25                              18427105 116 -  18827391 t-atgacctgtttcatg-------ggag----------a--cgag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtcgta-----tatgca-gaaccccg------tc
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       13542 116 -     50209 t-atgacctgtttcatg-------ggag----------a--cgag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtcgta-----tatgca-gaaccccg------tc
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135420542 116 + 135778131 t-atgacctgTTTCATG-------GGAG----------A--Cgag-caag-gggaagga---------------g--ag-a---------------gtga-Cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtcgta-----tatgca-gaaccccg------tC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1909055 116 +   2368649 t-atgacctgtttcatg-------ggag----------A--Cgag-caag-gggaagga---------------g--ag-a---------------gtga-Cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtagta-----tatcca-gaacccca------tc
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199948733 116 + 200372422 t-atgacctgtttcatg-------ggag----------a--cgag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtagta-----tatcca-gaacccca------tc
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              35593 116 +     84244 t-atgacctgtttcatg-------ggag----------a--cgag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtagta-----tatcca-gaacccca------tc
i Colobus_polykomos.k141_906115                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 49318  73 +     63868 ----------------------------------------------TCAG-GGGAAGGT---------------A--AG-G---------------G-TA-TCT-T-TCCTATT-CTAC-TGT-------TTCCTCAAATACCAAAGTATCATATT----TGGG---GACAAG----------------------------
i Cricetomys_gambianus.CriGam_scaffold_18520             I 20 I 4
s Cricetulus_griseus.LT883664.1                           11666783  73 + 224834208 ----------------------------------------------TCAG-GGGAAGGA---------------A--AG-G---------------T-GG-TCC-T-TCCTGCT-CTAC-AGT-------TTCCTCAAATGCTAAGGTCTCATATT----TTGG---GACAAG----------------------------
i Cricetulus_griseus.LT883664.1                          I 21 I 4
s Ctenodactylus_gundi.CteGun_scaffold_65                    836354  98 +   1526836 t-gtggcctccttcaga-------ggag----------a-a--gg-ccagtgagaaggt---------------a--aa-a---------------g-CA-GAA-T-CCTGGTT-CTAT-T-T-------TTCTTCAAACGCTAAGACTCTGGCTTT---TGAA---GTAGGG----------------------------
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 4
s Daubentonia_madagascariensis.ctg71                      12536561  89 -  12879189 ------------------------------------------------ag-gggaggat---------------g--ag-a---------------gaga-ctt-t-cctactt-ctctgg-t-------ttCTTCAAATGCCAAGGTATCATATTC---TGAA---GTTGCA-----TATCCA-GAACCCCA------TC
i Daubentonia_madagascariensis.ctg71                     I 13 C 0
s Ellobius_lutescens.LOEQ01008920.1                          90299  50 +    110024 -----------------------------------------------------------------------------------------------------------TCCTGGT-CTAC-TGT-------TTCTTCAAATGCTGAGGTGTCATATT----TGGC---AACAAG----------------------------
i Ellobius_lutescens.LOEQ01008920.1                      I 20 I 4
s Ellobius_talpinus.LOJH01109367.1                             481  50 +      6299 -----------------------------------------------------------------------------------------------------------TCCTGTT-CTAC-TGT-------TTCTTCAAATGCTGAGGTGTCATATT----TGGC---AACAAG----------------------------
i Ellobius_talpinus.LOJH01109367.1                       I 20 I 4
s Erythrocebus_patas.Contig38                             21203713 116 -  21539334 t-atgacctgtttcatg-------ggag----------a--cgag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtcgta-----tatcca-gaaccccg------tc
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13023 116 -     14127 t-atggtctgctgcagg-------ggag----------a--aggc-taag-gggaagat---------------g--ag-a---------------gaga-tct-t-cctaCTT-GTCCAG-T-------TTCTTCCAATGCCAAGGTCCCATATTC---TGAA---GTAGCA-----TATCCA-GAACCCCA------TC
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                5721 116 -     16928 t-atggtctgctgcagg-------ggag----------a--aggc-taag-gggaagat---------------g--ag-a---------------gaga-tct-t-cctaCTT-GTCCAG-T-------TTCTTCCAATGCCAAGGTCCCATATTC---TGAA---GTAGCA-----TATCCA-GAACCCCA------TC
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              14750 116 -     25546 t-atggtctgctgcagg-------ggag----------a--aggc-taag-gggaagat---------------g--ag-a---------------gaga-tct-t-cctaCTT-GTCCAG-T-------TTCTTCCAATGCCAAGGTCCCATATTC---TGAA---GTAGCA-----TATCCA-GAACCCCA------TC
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            11948 116 +     26330 t-atggcctgctgcagg-------ggag----------a--aggc-taag-gggaagat---------------g--ag-a---------------gaga-cct-t-cctgctt-gtccag-t-------ttcttccagtgccaaggtcccatattc---tgaa---gtagca-----tatcca-gaacccca------tc
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 13188 116 +     23973 t-atggtctgctgcagg-------ggag----------a--aggc-taag-gggaagat---------------g--ag-a---------------gaga-tct-t-cctaCTT-GTCCAG-T-------TTCTTCCAATGCCAAGGTCCCATATTC---TGAA---GTAGCA-----TATCCA-GAACCCCA------TC
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                11948 116 +     75513 t-atggcctgctgcaca-------ggag----------a--aggc-taag-gggaagat---------------g--ag-a---------------gaga-cct-t-cctgctt-gtccag-t-------ttcttccagtgccaaggtcccatattc---tgaa---gtagca-----tatcca-gaacccca------tc
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                  9886 116 +     97555 t-atggtctgctgcagg-------ggag----------a--aggc-taag-gggaagat---------------g--ag-a---------------gaga-tct-t-cctaCTT-GTCCAG-T-------TTCTTCCAATGCCAAGGTCCCATATTC---TGAA---GTAGCA-----TATCCA-GAACCCCA------TC
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            12805 116 +     26496 t-atggcctgctgcagg-------ggag----------a--aggc-taag-gggaagat---------------g--ag-a---------------gaga-cct-t-cctgctt-gtccag-t-------ttcttccaatgccaaggtcccatattc---tgaa---gtagca-----tatcca-gaacccca------tc
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  3423 116 -     17153 t-atggtctgctgcagg-------ggag----------a--aggc-taag-gggaagat---------------g--ag-a---------------gaga-tct-t-cctaCTT-GTCCAG-T-------TTCTTCCAATGCCAAGGTCCCATATTC---TGAA---GTAGCA-----TATCCA-GAACCCCA------TC
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              12999 116 +    111500 t-atggtctgctgcagg-------ggag----------a--aggc-taag-gggaagat---------------g--ag-a---------------gaga-tct-t-cctaCTT-GTCCAG-T-------TTCTTCCAATGCCAAGGTCCCATATTC---TGAA---GTAGCA-----TATCCA-GAACCCCA------TC
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Galago_moholi.ctg2040                                     425484 116 -    453645 G-ATGGCCTGCTTCAGG-------GGAC----------A--AGAC-TCAG-GAGAAGAC---------------A--AG-A---------------GAAAAATT-T-CTTTCTT-CTCCTA-T-------TTCTTCAAATGCCAAGGAACC--ATTC---TGAA---GTAGCA-----TATCCAAGAATCCCA------TC
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             3191 116 +     11339 g-atggcctgcttcagg-------ggac----------a--agac-tcag-gagaagac---------------a--ag-a---------------gaaaactt-t-ctTTCTT-CTCCTA-T-------TTCTTCAAATGCCAAGGAACC--ATTC---TGAA---GTAGCA-----TATCCAAGAATCCCA------TC
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                             494 116 +     41679 G-ATGGCCTGCTTCAGA-------GGAC----------A--AGAC-TCAG-GAGAAGAC---------------A--AG-A---------------GAAAACTT-T-CCTACTT-CTCCTG-T-------TTCTTCAAATGCCAAGGAACC--ATTC---TGAA---GTAGCA-----TATCCAAGAATCCCA------TC
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840                336  73 -      9135 t-atgacctgcttcagg-------ggag----------a--acag-g--g-gggaaggt---------------g--aa-g---------------t-cg-ttt-c-cctgctt-ctgatg-t-------ttcctcaaatgtc----------------------------------------------------------
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 I 12
s Gorilla_beringei.k141_3596273                              14498 116 -     32273 t-atgacctgtttcatg-------ggag----------a--ggag-caag-gggaaggt---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgcca-t-------ttccccaagtgccaaggtaacgtattt---tggg---gtagta-----tatcaa-gaaccccg------tc
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186336645 116 + 186649187 t-atgacctgtttcatg-------ggag----------a--ggag-caag-gggaaggt---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgcca-t-------ttccccaagtgccaaggtaacgtattt---tggg---gtagta-----tatcaa-gaaccccg------tc
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6078 116 -     19426 t-atggcctgttgcagg-------ggag----------a--aggc-tagg-gggaagat---------------g--ag-a---------------gaga-cct-t-cctaCTT-GTCCAG-T-------TTCTTCCAATGCCAAGGTCCCATATTC---TAAA---GTAGCA-----TATCCA-GAACCCCA------TC
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             11227 116 -     15286 t-atggcctgttgaagg-------ggag----------a--aggc-tagg-gggaagat---------------g--ag-a---------------gaga-cct-t-cctaCTT-GTCCAG-T-------TTCTTCCAATGCCAAGGTCCCATATTC---TAAA---GTAGCA-----TATCCA-GAACCCCA------TC
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             12866 116 +     18253 t-atggcctgttgcagg-------ggag----------a--aggc-tagg-gggaagat---------------g--ag-a---------------gaga-cct-t-cctaCTT-GTCCAG-T-------TTCTTCCAATGCCAAGGTCCCATATTC---TAAA---GTAGCA-----TATCCA-GAACCCCA------TC
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         12967 116 -     41752 t-atggcctgttgcagg-------ggag----------a--aggc-tagg-gggaagat---------------g--ag-a---------------gaga-cct-t-cctaCTT-GTCCAG-T-------TTCTTCCAATGCCAAGGTCCCATATTC---TAAA---GTAGCA-----TATCCA-GAACCCCA------TC
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         12805 116 -     16460 t-atggcctgttgcagg-------ggag----------a--aggc-tagg-gggaagat---------------g--ag-a---------------caga-cct-t-cctaCTT-GTCCAG-T-------TTCTTCCAATGCCAAGGTCCCATATTC---TAAA---GTAGCA-----TATCCA-GAACCCCA------TC
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Hoolock_leuconedys.ctg274                                    433313 116 +    630532 c-atgacctgtttcatg-------ggag----------a--tgag-caag-gggaaggt---------------g--ag-a---------------gtga-cct-t-tctgcat-ttgcca-t-------ttcctcaaatgccaagataacgtattt---tggg---gtagta-----tatcaa-gaaccccg------tc
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_232023                                1079 116 -     12752 t-atgacctgtttcatg-------ggag----------a--cgag-caag-gggaaggt---------------g--ag-a---------------gtga-cct-t-tctgcat-tcgcca-t-------ttcctcaaaggccaagataacgtattt---tggg---gtagta-----tatcaa-gaaccccG------TT
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                               1123 116 +     14092 t-atgacctgtttcatg-------ggag----------a--cgag-caag-gggaaggt---------------g--ag-a---------------gtga-cct-t-tctgcat-tcgcca-t-------ttcctcaaaggccaagataacgtattt---tggg---gtagta-----tatcaa-gaaccccA------TT
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189541906 116 - 191637585 t-atgatctgtttcatg-------ggag----------a--cgag-caag-gggaaggt---------------g--ag-a---------------gtga-cct-t-tctgcat-tcgcca-t-------ttcctcaaaggccaagataacgtattt---tggg---gtagta-----tatcaa-gaaccccA------TT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3334800 116 -  11177569 t-atgatctgtttcatg-------ggag----------a--cgag-caag-gggaaggt---------------g--ag-a---------------gtga-cct-t-tctgcat-tcgcca-t-------ttcctcaaaggccaagataacgtattt---tggg---gtagta-----tatcaa-gaaccccA------TT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7519106  98 -   7955117 c-atctcctgctctagg-------gtag----------a----ag-gcaaggagaagag---------------g--ac-t---------------t-tg-gcc-ttccttttc-tgct-g-t-------ttcctcaaatgcttaagtaccctattt---tggg---gtagca----------------------------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 4
s Indri_indri.k141_3655594                                   21770 116 +     31101 t-atggcctgcttcagg-------ggag----------a--aggg-gaag-ggaaagat---------------g--ag-a---------------gaga-cct-t-cctactt-ctccag-t-------ttcttccattgccaagatcttatattc---ttaa---gtagca-----tatCCA-GAACCCCA------TC
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15523310 116 -  30322482 t-atggcctgttgcagg-------ggag----------a--aggc-taag-gggaagat---------------g--ag-a---------------gaga-cct-t-cctaCTT-GTCCAG-T-------TTCTTCCAATGCCAAGGTCCCATATTC---TAAA---GTAGCA-----TACCCA-GAACCCCA------TC
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        6137  82 +     64341 --------------------------------------------------------ggt---------------g--ag-a---------------gtgg-cct-t-tctgcat-ctgccg-c-------ttcctcaaatgccAAGGTCACGTGTTT---CGGG---GTACTC-----GATCCA-GAACCCCG------TC
i Leontocebus_fuscicollis.k141_1820339                   I 22 C 0
s Leontocebus_illigeri.k141_3350179                           3464  82 +      4941 --------------------------------------------------------ggt---------------g--ag-a---------------gtgg-cct-t-tctgcat-ctgccg-c-------ttcctcaaatgccAAGGTCACGTGTTT---CGGG---GTACCC-----GATCCA-GAACCCCG------TC
i Leontocebus_illigeri.k141_3350179                      I 22 C 0
s Leontocebus_nigricollis.k141_4610752                        6180  82 +     35603 --------------------------------------------------------ggt---------------g--ag-a---------------gtgg-cct-t-tctgcat-ctgccg-c-------ttcctcaaatgccAAGGTCACGTGTTT---CGGG---GTACTC-----GATCCA-GAACCCTG------TC
i Leontocebus_nigricollis.k141_4610752                   I 22 C 0
s Leontopithecus_chrysomelas.k141_1519602                    27645  94 +     38576 --------------------------------------------------------g--gagcaaggggaaggtg--ag-a---------------gtga-cct-t-tctgcat-ctgccg-c-------ttcctcaaatgccAAGGTCACGTGTTT---CGGG---GT-CTC-----TATCCA-GAACCCCG------TC
i Leontopithecus_chrysomelas.k141_1519602                I 22 C 0
s Leontopithecus_rosalia.k141_464620                         24342  94 +     66356 --------------------------------------------------------g--gagcaaggggaaggtg--ag-a---------------gtga-cct-t-tctgcat-ctgccg-c-------ttcctcaaatgccAAGGTCACGTGTTT---CGGG---GT-CTC-----TATCCA-GAACCCCG------TC
i Leontopithecus_rosalia.k141_464620                     I 22 C 0
s Lepilemur_ankaranensis.k141_596936                         10194 116 -     23766 t-atggcctgcttcagc-------ggag----------a--aggg-gaag-gggaagat---------------g--ag-a---------------gaga-cct-t-tctactt-ctccag-t-------ttcttccaatgccaaggtcccaggttc---tgag---gtagca-----tatcca-gaacccca------tc
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             28260 116 +     45836 t-atggcctgcttcagc-------ggag----------a--aggg-gaag-gggaagat---------------g--ag-a---------------gaga-cct-t-tctactt-ctccag-t-------ttcttccaatgccaaggtcccaggttc---tgaa---gtagca-----tatcca-gaacccca------tc
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                           805 116 +     25010 t-atggcctccttcagg-------ggag----------a--aggt-gaaa-gggaagat---------------g--ag-a---------------gaga-cct-t-cctaCTT-CTCCAG-T-------TTCTTCCAATGCCAAGGTCCCAGGTTC---TGAA---GCAGAA-----TATCCA-GAACCCCA------TC
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      26196 116 +     54090 t-atggcctgcttcagt-------ggag----------a--aggg-gaag-gggaagat---------------g--ag-a---------------gaga-cct-t-tctactt-ctccag-t-------ttcttccaatgccaaggtcccaggttc---tgaa---gtagca-----tatcca-gaacccca------tc
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     5446  67 -     14121 ------------------------------------------------------AAGGT---------------A--ACTG---------------T-GC-CCT-T-CCTGCTC-T-GCTG-T-------TTTTTCAAATACCAAGATGCCATCTTT---TAGG---GTAGCA----------------------------
i Lepus_americanus.LepAme_scaffold_107385                I 327 I 16
s Lophocebus_aterrimus.ctg367                              1435664 116 +   1826925 t-atgacctgtttcatg-------ggag----------a--caag-caag-gcgaagga---------------g--ag-a---------------gtga-cct-t-tctgcac-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtcgta-----tatcca-gaaccccg------tc
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            4874 113 +     11245 T-ATGGCCTGCTTCAAG-------GGAC----------A--ATGC-TTAG-GAGAAGAC---------------A--AG-A---------------GAAACCTT-T-CCTACTT----CTG-T-------TTCTTCCAATGCCAAGGAATC--ATTC---TGAA---ACAGCA-----TATCCAAGAATTCCA------TA
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1003724 113 +   6120653 T-ATGGCCTGCTTCAAG-------GGAC----------A--ATGC-TTAG-GAGAAGAC---------------A--AG-A---------------GAAACCTT-T-CCTACTT----CTG-T-------TTCTTCCAATGCCAAGGAATC--ATTC---TGAA---ACAGCA-----TATCCAAGAATTCCA------TA
i Loris_tardigradus.ctg83                                C 0 C 0
s Macaca_arctoides.k141_2326796                               5479 116 +     40492 t-atgacctgtttcatg-------ggag----------a--cgag-ccag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtcgta-----tatcca-gaaccccg------tc
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59674741 116 +  60120075 t-atgacctgtttcatg-------ggag----------a--cgag-ccag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtcgta-----tatcca-gaaccccg------tc
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 11256 116 -     26193 t-atgacctgtttcatg-------ggag----------a--cgag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtcgta-----tatcca-gaaccccg------tc
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            79039 116 -    114318 t-atgacctgtttcatg-------ggag----------a--cgag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtcgta-----tatcca-gaactccg------tc
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  4736 116 -     23192 t-atgacctgtttcatg-------ggag----------a--cgag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtcgta-----tatcca-gaaccccg------tc
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                14198 116 -     29190 t-atgacctgtttcatg-------ggag----------a--cgag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtcgta-----tatcca-gaaccccg------tc
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  22763 116 +     37952 t-atgacctgtttcatg-------ggag----------a--cgag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtcgta-----tatcca-gaaccccg------tc
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186837854 116 + 187317192 t-atgacctgTTTCATG-------GGAG----------A--Cgag-caag-gggaagga---------------g--ag-a---------------gtga-CCT-T-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtcgta-----tatcca-gaaccccG------TC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25456415 116 -  25927173 t-atgacctgtttcatg-------ggaG----------A--Cgag-caag-gggaagga---------------g--ag-a---------------gtga-CCT-T-TCTGCAT-CTGCCG-T-------TTCCTCAAATGCCAAAGTAACATATTT---TGGA---GTCGTA-----TATCCA-GAACCCCG------TC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  78614 116 +     89720 t-atgacctgtttcatg-------ggag----------a--cgag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtcgta-----tatcca-gaaccccg------tc
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 5612 116 +     20474 t-atgacctgtttcatg-------ggag----------a--cgag-ccag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtcgta-----tatcca-gaaccccg------tc
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   5412 116 -     14993 t-atgacctgtttcatg-------ggag----------a--cgag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtcgta-----tatcca-gaaccccg------tc
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  328283 116 -    668171 t-atgacctgtttcatg-------ggag----------a--cgag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtcgta-----tatcca-gaaccccg------tc
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 3724 116 -     24072 t-atgacctgtttcatg-------ggag----------a--cgag-ccag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtcgta-----tatcca-gaaccccg------tc
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               24351 116 -     45290 t-atgacctgtttcatg-------ggag----------a--cgag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtcgta-----tatcca-gaaccccg------tc
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23935937 116 -  24302211 t-atgacctgtttcatg-------ggag----------a--cgag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacgtattt---tgga---gtcgta-----tatcca-gaaccccg------tc
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               350067 116 +    752769 t-atgacctgtttcatg-------ggag----------a--cgag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacgtattt---tgga---gtcgta-----tatcca-gaaccccg------tc
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33101415  98 -  40650429 c-atcttctgctctagg-------gtag----------a----ag-gcaaggagaagag---------------g--ac-t---------------g-tg-gcc-ttccttttc-tgct-g-t-------ttcctcaaatgcttaagtaccctattt---tggg---gtagca----------------------------
i Marmota_marmota.CZRN01000018.1                         C 0 I 4
s Meriones_unguiculatus.MerUng_scaffold_7390                 32000  73 +    140813 ----------------------------------------------tcat-gggaaggt---------------a--ag-g---------------g-tG-CCC-T-TCCTGTT-CTAC-AGT-------CTCCTTAAATGCTAACATACCATATT----TGGA---GACAAG----------------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             I 21 I 4
s Mesocricetus_auratus.KB708134.1                         12181458  80 -  29670104 ----------------------------------------------TCAC-GAGAAGGA---------------A--AG-G---------------C-AG-CCC-T-TATTGTT-CTac-tgtttcctgtttcctcaAAAGCTAAGGTTTCATATT----TGAG---GACATG----------------------------
i Mesocricetus_auratus.KB708134.1                        I 21 I 4
s Mico_argentatus.k141_1239457                                4409  95 -      7380 --------------------------------------------------------g-----------------g--ag-caagaggaaggtgagagtga-cct-t-tctgcat-ctgcca-c-------ttcctcagatgccAAGGTCACGTGTTT---CGGG---GTACTC-----TATCCA-GAACCGAG------TC
i Mico_argentatus.k141_1239457                           I 22 C 0
s Mico_humeralifer.k141_1976199                               3482  95 +     18990 --------------------------------------------------------g-----------------g--ag-caagaggaaggtgagagtga-cct-t-tctgcat-ctgcca-c-------ttcctcagatgccAAGGTCACGTGTTT---CGGG---GTACTC-----TATCCA-GAACCGAG------TC
i Mico_humeralifer.k141_1976199                          I 22 C 0
s Mico_schneideri.k141_1950671                                      4421  95 -      7356 --------------------------------------------------------g-----------------g--ag-caagaggaaggtgagagtga-cct-t-tctgcat-ctgcca-c-------ttcctcagatgccAAGGTCACGTGTTT---CGGG---GTACTC-----TATCCA-GAACCGAG------TC
i Mico_schneideri.k141_1950671                                 I 22 C 0
s Microcebus_murinus.CM007674.1                           18290709 117 -  93316391 T-CTGGCCCGcttcagg-------ggag----------a--aggg-gaaa-aggaagat---------------g--aG-G---------------GAGA-CCT-T-CCTACTT-CTCCAG-T-------TTCTTCCAGTGCCAAGGTCCCATGTTC---TGAA---GTAGCA-----TACCCA-GAACCCCA-A----TC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_534055                           7662 116 -     28506 t-atgacctgcttcatg-------ggag----------a--cgag-caag-gggaagga---------------g--ag-g---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtcgta-----gatcca-gaaccccg------tc
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirza_zaza.k141_952172                                      8260 117 -     37649 t-ctggcctgcttcagg-------ggag----------a--aggg-gaaa-gggaaaat---------------g--ag-g---------------gaga-cct-t-cctaCTT-GTCCAG-T-------TTCTTCCAGTGCCAAGGTCCCATGTTC---TGAA---GTAGCA-----TATCCA-GAACCCCA-A----TC
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mus_caroli.LT608237.1                                   84360613  47 - 120012414 -------------------------------------------------------------------------------------------------------------CCTTC-CTAC-TGT-------TTCCTCAAATGCTAACG-ATCTTATT----TGGC---AACAAG----------------------------
i Mus_caroli.LT608237.1                                  I 42 I 4
s Mus_musculus.chr8                                       87649613  47 - 129401213 -------------------------------------------------------------------------------------------------------------CCATT-CTAC-TGT-------TTCCTCAAATGCTAAGG-ATCTTATC----TGGC---AACAAA----------------------------
i Mus_musculus.chr8                                      I 42 I 4
s Mus_pahari.LT608297.1                                   31354269  47 -  89631738 -------------------------------------------------------------------------------------------------------------CCGTT-CTAC-TGT-------TTCCTCAAATTCTAACA-ATCATATT----TGGC---AACAAC----------------------------
i Mus_pahari.LT608297.1                                  I 42 I 4
s Mus_spretus.CM004101.1                                  90751674  47 - 130317789 -------------------------------------------------------------------------------------------------------------CCGTT-CTAC-TGT-------TTCCTCAAATGCTAACG-ATCTTATC----AGGC---AACAAG----------------------------
i Mus_spretus.CM004101.1                                 I 42 I 4
s Nannospalax_galili.KL204047.1                            2033080  69 -   3037898 ------------------------------------------------------AAGCT---------------G--AG-G---------------G-TG-GCC-T-TCCTATT-CTAC-TGT-------TTCTTCAAATGCTAAGGTGTCATTTT----GGGTAATAACAAG----------------------------
i Nannospalax_galili.KL204047.1                          I 23 I 10
s Nasalis_larvatus.k141_413338                               13657 116 +     21681 t-atgacctgtttcatg-------ggag----------a--caag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgtcaaagtaacatattt---tgga---gtagta-----catcca-gaacccca------tc
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nycticebus_bengalensis.LG01                            102578697 116 - 196305487 G-ATGGCCTGCTTCAGG-------GGAC----------A--AGCC-TCAC-AAGAAGAC---------------A--AG-A---------------GAAAACTT-T-CCTACTT-CTCCTA-T-------TTCTTCCAATGCCAAGGAACC--ATTA---AGAA---ATAGCA-----TATCAAAGAATTCCA------TA
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_771082                               542 116 -      2667 G-ATGGCCTGCTTCAGG-------GGAC----------A--AGCC-TCAC-AAGAAGAC---------------A--AG-A---------------GAAAACTT-T-CCTACTT-CTCCTA-T-------TTCTTCCAATGCCAAGGAACC--ATTA---AGAA---ATAGCA-----TATCAAAGAATTCCA------TA
i Nycticebus_coucang.k141_771082                         C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749118 116 + 199412804 G-ATGGCCTGCTTCAGG-------GGAC----------A--AGCC-TCAC-GAGAAGAC---------------A--AG-A---------------GAAAACTT-T-CCGACTT-TTCCTA-T-------TTCTTCCAATGCCAAGGAACC--ATTA---AGAA---ACAGCA-----TATCCAAGAATTCCA------TA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1362569  68 +   3988456 ------------------------------------------------------AGGGT---------------G--ATAG---------------T-GG-CCT-T-GTTACTTCA-GTTG-C-------TTCCTCAAATGCCAAGATGCCATCTTT---TGGG---ATAGCA----------------------------
i Ochotona_princeps.JH802162.1                           I 334 I 12
s Ondatra_zibethicus.OndZib_scaffold_46174                    3479  50 -     28053 -----------------------------------------------------------------------------------------------------------TCCTGTT-CTAC-TGT-------TTCCTCAAATGCTGAGGTTCCATATT----TGGG---GACAAG----------------------------
i Ondatra_zibethicus.OndZib_scaffold_46174               I 20 I 4
s Onychomys_torridus.OnyTor_scaffold_2986                    79373  73 +    102263 ----------------------------------------------TTGG-GGGAAGGT---------------A--AG-G---------------G-CT-CCC-T-TCCTGTT-CTAC-TGT-------TTCCTTAAATGCTAAGGTGTCATGTT----TGGG---GACAAG----------------------------
i Onychomys_torridus.OnyTor_scaffold_2986                I 19 I 4
s Oryctolagus_cuniculus.CM000791.1                        67146275  67 + 174332312 ------------------------------------------------------AAGGT---------------A--ACTA---------------T-GC-CCT-T-CCTGCTC-C-GCTG-T-------TTTCTCAAATTCCAAGATGCCATCTTT---TAGG---GTAGCA----------------------------
i Oryctolagus_cuniculus.CM000791.1                       I 313 I 16
s Otolemur_crassicaudatus.k141_222918                         3059  73 +      8798 --------------------------------------------------------------------------------------------------AAACTT-T-CTTACTT-CTCCTG-T-------TTCTTCAAATGCCAAGGAACC--ATTC---TGAA---GTAGCA-----TATCCAAGAATCCCA------TC
i Otolemur_crassicaudatus.k141_222918                    I 37 C 0
s Otolemur_garnettii.GL873799.1                             695223  73 -   1103335 --------------------------------------------------------------------------------------------------AAACTT-T-CTTactt-ctcctc-t-------ttcttcaaaTGCCAAGGAACT--ATTC---TGAA---GTAGCA-----TATCCAAGAATCCCA------TC
i Otolemur_garnettii.GL873799.1                          I 37 C 0
s Pan_paniscus.KQ411613.1                                    42593 115 +     80009 T-ATGACCTGTTTCATG-------GGAG----------A--CGAG-CAAG-GG-AAGGT---------------G--AG-A---------------GTGA-CCT-T-TCtgcat-ctgcca-t-------ttccccaaGTGCCAAGGTAACGTATTT---TGGG---GTAGTA-----TATCAA-GAACCCCG------TC
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03001836.1                             28518 115 +     51860 T-ATGACCTGTTTCATG-------GGAG----------A--CGAG-CAAG-GG-AAGGT---------------G--AG-A---------------GTGA-CCT-T-TCTGCAT-CTGCCA-T-------TTCCCCAAGTGCCAAGGTAACGTATTT---TGGG---GTAGTA-----TATCAA-GAACCCCG------TC
i Pan_troglodytes.NBAG03001836.1                         C 0 I 448
s Papio_anubis.CM001495.2                                183441691 116 + 183742232 t-atgacctgTTTCATG-------GGAG----------A--Cgag-caag-gggaagga---------------g--ag-a---------------gtga-CCT-T-TCTGCAT-CTGCCG-T-------TTCCTCAAATGCCAAAGTAACATATTT---TGGA---GTCGTA-----TATCCA-GAACCCCG------TC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             5385 116 +     20448 t-atgacctgtttcatg-------ggag----------a--cgag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtcgta-----tatcca-gaaccccg------tc
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20562193 116 +  20919399 t-atgacctgtttcatg-------ggag----------a--cgag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtcgta-----tatcca-gaaccccg------tc
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   4129 116 +     41871 t-atgacctgtttcatg-------ggag----------a--cgag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtcgta-----tatcca-gaaccccg------tc
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     7414 116 +     27711 t-atgacctgtttcatg-------ggag----------a--cgag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtcgta-----tatcca-gaaccccg------tc
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  7492 116 +      9205 t-atgacctgtttcatg-------ggag----------a--cgag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtcgta-----tatcca-gaaccccg------tc
i Papio_ursinus.k141_3428135                             C 0 C 0
s Perodicticus_ibeanus.k141_855320                            9166 115 +     13100 A-ACGGACTGCTTCAGG-------GGTC----------T--AG-C-TCAG-GAGAAGAC---------------A--AG-A---------------GAAAACTT-T-CCTACTT-ATCCTG-T-------TACTTCAAATGCCAAGAAACC--ATTC---TGAA---ATAGCA-----TATCCAAGAATCCCA------TC
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             7568 115 +     25941 A-ACGAACTGCTTCAGG-------GGTC----------T--AG-C-TCAG-GAGAAGAC---------------A--AG-A---------------GAAAACTT-T-CCTACTT-ATCCTG-T-------TCCTTCAAATGCCAAGAAACC--ATTC---TGAA---ATAGCA-----TATCCAAGAATCCCA------TC
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18193994  73 -  18517816 ----------------------------------------------tgag-gggaaggt---------------a--ag-g---------------g-ct-cct-t-tcctatt-ctac-tgt-------ttcctcaaACACTACGGTGTCATATT----TGGG---GACAAG----------------------------
i Peromyscus_maniculatus.KI615324.1                      I 21 I 4
s Piliocolobus_badius.k141_1234363                           42153 116 +     62158 t-atgacctgtttcatg-------ggag----------a--ggag-ccag-gggaagga---------------g--ag-a---------------gcga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtagta-----tttcca-gaacccca------tc
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        36884 116 +     89929 t-atgacctgtttcatg-------ggag----------a--ggag-ccag-gggaagga---------------g--ag-a---------------gcga-cct-t-tctgcac-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtagta-----tatcca-gaacccca------tc
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            38300 116 +     51399 t-atgacctgtttcatg-------ggag----------a--ggag-ccag-gggaagga---------------g--ag-a---------------gcga-cct-t-tctgcac-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtagta-----tatcca-gaacccca------tc
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14294538 116 -  14605196 t-atgacctgtttcatg-------ggag----------a--GGag-ccag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtagta-----tatcca-gaacccca------tc
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189129636 116 + 189387572 t-atgacctgttccatg-------ggag----------a--caag-caag-gggaaggt---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaggtaacgtattt---tggg---gtagta-----tatcaa-gaacccca------tc
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9569244 116 +   9816681 t-atgacctgttccatg-------ggag----------a--caag-caag-gggaaggt---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaggtaacgtattt---tggg---gtagta-----tatcaa-gaacccca------tc
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               71825 116 -     81375 t-atgacctgtttcatg-------gcag----------a--caag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaactaacatattt---tgga---gtagta-----taccca-gaacccca------tc
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              3645 116 +     19060 t-atgacctgtttcatg-------gcag----------a--caag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaactaacatattt---tgga---gtagta-----tatcca-gaacccca------tc
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2595988 116 -   4620579 T-ATGGCCTGTTGCAGG-------GGAG----------A--AGGC-TAAG-GGGAAGAT---------------G--AG-A---------------GAGA-CCT-T-CCTACTT-GTCCAG-T-------TTCTTCCAGTGCCAAGGTCCCATATTC---TAAA---GTAGCA-----TATCCA-GAACCCCA------TC
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     989958 116 +   2598838 t-atggcctgcttcagg-------ggag----------a--aggg-gaag-ggaaagat---------------g--aG-A---------------GAGA-CCT-T-CCTACTT-CTCCAG-T-------TGCTTCCAATGCCAAGGTCCCATGTTC---TAAA---GTAGCA-----TATCCA-GAACCCCA------TC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          28268 116 +     38485 t-atggcctgcttcagg-------ggag----------a--aggg-gaag-gggaagat---------------g--ag-a---------------gaga-cct-t-cctactt-ctccag-t-------ttcttccaatgccaaggtcccatgttc---taaa---gtagca-----tatcca-gaacccca------tc
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                               313 116 -     13098 t-atggcctgcttcagg-------ggag----------a--aggg-gaag-gggaagat---------------g--ag-a---------------gaga-cct-c-cctactt-ctccag-t-------ttcttccaatgccaaggtcccatgttc---tgaa---gtagca-----tatcca-gaacccca------tc
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          25819  86 +     35766 ----------------------------------------------------ggaagat---------------g--ag-a---------------gaga-cct-t-cctactt-ctccag-t-------ttcttccaatgccaaggtcccatgttc---tgaa---gtagca-----tatcca-gaacccca------tc
i Propithecus_edwardsi.k141_1176054                      I 24 C 0
s Propithecus_perrieri.k141_1200571                           3977 116 -     24134 t-atggcctgcttcagg-------ggag----------a--aggg-gaag-gggaagat---------------g--ag-a---------------gaga-cct-t-cctactt-ctccag-t-------ttcttccaatgccaaggtcccatgttc---tgaa---gtagca-----tatcca-gaacccca------tc
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        27799 116 -     67325 t-atggcctgtttcaag-------ggag----------a--aggg-gaag-gggaagat---------------g--ag-a---------------gaga-cct-t-cctactt-ctccag-t-------ttcttccaatgccaaggtcccatgttc---taaa---gtagca-----tatcca-gaacccca------tc
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4021 116 -      6182 t-atggcctgcttcagg-------ggag----------a--aggg-gaag-gggaagat---------------g--ag-a---------------gaga-cct-t-cctactt-ctccag-t-------tgcttccaatgccaaggtcccatgttc---taaa---gtagca-----tatcca-gaacccca------tc
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             9634  73 -     21651 ----------------------------------------------TCGT-GGGAAGGC---------------G--AG-G---------------G-TG-CCC-T-TCCTGTT-CTAC-AGT-------TTCCTCAAATGCTAACATACCATATT----TGGA---GACAAG----------------------------
i Psammomys_obesus.NESX01036370.1                        I 21 I 4
s Pygathrix_cinerea.k141_1153803                             13656 116 -     91421 t-atgacctgtttcatg-------ggag----------a--caag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtagta-----tatcca-gaacccca------tc
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7607782 116 +   7812017 t-atgacctgtttcatg-------ggag----------a--caag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtagta-----tatcca-gaacccca------tc
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             13630 116 -     72585 t-atgacctgtttcatg-------ggag----------a--caag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtagta-----tatcca-gaacccca------tc
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53569886  47 +  90668790 -------------------------------------------------------------------------------------------------------------CTGTT-CTAC-TGT-------TTCCTCAAATGCTAATG-GTCATATT----TGGC---AACAAG----------------------------
i Rattus_norvegicus.chr16                                I 38 I 4
s Rhinopithecus_bieti.k119_217274                             5345 116 -     11128 t-atgacctgtttcatg-------ggag----------a--caag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtagta-----tatcca-gaacccca------tc
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91234705 116 - 195417433 t-atgacctgtttcatg-------ggag----------A--CAag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtagta-----tatcca-gaacccca------tc
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7670350 116 +   7961872 t-atgacctgtttcatg-------ggag----------a--caag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtagta-----tatcca-gaacccca------tc
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_2619299                               6854  74 -      8359 -------------------------------------------------------------------------------------------------tgg-cct-t-tctGCAT-CTGCCG-C-------TTCCTCAAATGCCAAGGTCACGTGTTT---CGGG---GCACTT-----GATCCA-GAACCCCG------TC
i Saguinus_bicolor.k141_2619299                          I 28 C 0
s Saguinus_imperator.k141_2524406                              795  74 +      2197 -------------------------------------------------------------------------------------------------TGG-CCT-T-TCTGCAT-CTGCCG-C-------TTCCTCAAATGCCAAGGTCACGTGTTT---CGGG---GTACTC-----GATCCA-GAACCCCA------TC
i Saguinus_imperator.k141_2524406                        I 28 C 0
s Saguinus_inustus.k141_699149                               12217  74 +     13640 -------------------------------------------------------------------------------------------------tgg-cct-t-tctGCAT-CTGCCG-C-------TTCCTGAAATGCCAAGGTCACGTGTTT---CGGG---GTACTC-----GATCCA-GAACCCCG------TC
i Saguinus_inustus.k141_699149                           I 28 C 0
s Saguinus_labiatus.k141_285685                               7081  74 +      8564 -------------------------------------------------------------------------------------------------tgg-cct-c-tctGCAT-CTGCCG-C-------TTCCTCAAATGCCAAGGTCACGTGTTT---CGGG---GTACTC-----GATCCA-GAACCCCG------TC
i Saguinus_labiatus.k141_285685                          I 30 C 0
s Saguinus_midas.LG03                                    209467929  74 + 209938924 -------------------------------------------------------------------------------------------------tgg-cct-t-tctGCAT-CTGCCG-C-------TTCCTCAAATGCCAAGGTCACGTGTTT---CGGG---GCACTT-----GATCCA-GAACCCCG------TC
i Saguinus_midas.LG03                                    I 28 C 0
s Saguinus_mystax.k141_374627                                 6643  74 -      9399 -------------------------------------------------------------------------------------------------tgg-cct-t-tctGCAT-CTGCCG-C-------TTCCTGAAATGCCAAGGTCACGTGTTT---CGGG---GTACTC-----GATCCA-GAACCCCG------TC
i Saguinus_mystax.k141_374627                            I 28 C 0
s Saimiri_boliviensis.NW_024100920.1                     119949858 123 - 121099817 t-atggcctgcttcatGAGCAaggggAT----------A--TGAT-CAag-gggaaggt---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-c-------ttcctcaaatgccaaggtagagtgttt---tggg---gtacta-----tatcca-gaaccccg------tC
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       22314 123 +     46362 t-atggcctgcttcatgagcaaggggat----------a--tgat-caag-gggaaggt---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-c-------ttcctcaaatgccaaggtagagtgttt---tggg---gtacta-----tatcca-gaaccccg------tc
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               22409 123 +     45824 t-atggcctgcttcatgagcaaggggat----------a--tgat-caag-gggaaggt---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-c-------ttcctcaaatgccaaggtagagtgttt---tggg---gtacta-----tatcca-gaaccccg------tc
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             39037 123 -     64574 t-atggcctgcttcatgagcaaggggat----------a--tgat-caag-gggaaggt---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-c-------ttcctcaaatgccaaggtagagtgttt---tggg---gtacta-----tatcca-gaaccccg------tc
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               2043 123 -     23631 t-atggcctgcttcatgagcaaggggat----------a--tgat-caag-gggaaggt---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-c-------ttcctcaaatgccaaggtagagtgttt---tggg---gtacta-----tatcca-gaaccccg------tc
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 22302 123 -     61129 t-atggcctgcttcatgagcaaggggat----------a--tgat-caag-gggaaggt---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-c-------ttcctcaaatgccaaggtagagtgttt---tggg---gtacta-----tatcca-gaaccccg------tc
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5419275 100 -   5703754 ------------------------GGAG----------A--TGAG-Caag-gggaaggt---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-c-------ttcctcaaatgccAAGGTAACGTGCTT---TGGG---GTACTA-----GATCCA-GAACCCCG------TC
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          54316 100 -     80660 ------------------------GGAG----------A--TGAG-Caag-gggaaggt---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-c-------ttcctcaaatgccAAGGTAACGTGCTT---TGGG---GTACTA-----GATCCA-GAACCCCG------TC
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Semnopithecus_entellus.k141_11662                          18162 116 -     19888 t-atgacctgtttcatg-------ggag----------a--caag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtagta-----tatcca-gaaccccA------TT
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      25365 116 +     39453 t-atgacctgtttcatg-------ggag----------a--caag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtgacatattt---tgga---gtagta-----tatcca-gaaccccA------TT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            5884 116 +     27826 t-atgacctgtttcatg-------ggag----------a--caag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtgacatattt---tgga---gtagta-----tatcca-gaaccccA------TT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             5404 116 -     19483 t-atgacctgtttcatg-------ggag----------a--caag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtgacatattt---tgga---gtagta-----tatcca-gaaccccA------TT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      5473 116 +      7198 t-atgacctgtttcatg-------ggag----------a--caag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtagta-----tatcca-gaaccccA------TT
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         13731 116 +     15514 t-atgacctgtttcatg-------ggag----------a--caag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtgacatattt---tgga---gtagta-----tatcca-gaaccccA------TT
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1952303  98 -   3870691 c-atcttctgctctagg-------gtag----------a----ag-gcaaggagaagag---------------g--ac-t---------------g-tg-gcc-ttccttttc-tgct-g-t-------ttcctcaaatgcttaagtaccctattt---tggg---gtagca----------------------------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 4
s Symphalangus_syndactylus.tarseq_199                      1091948 116 -   1523678 t-atgacctgtttcatg-------ggag----------a--cgag-caag-gggaaggt---------------g--ag-a---------------gtga-cct-t-tctgcat-tcgcca-t-------ttcctcaaaggccaagataacgtattt---tggg---gtagta-----tatCAA-GAAGCCCG------TT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_2201908                               25641  43 +     70052 ---------------------------------------------------------------------------------------------------------------------------------------------ccaaggtgtcatattt---tggg--agtagca-----tgtcca-gaactcca------tc
i Tarsius_lariang.k141_2201908                           I 44 C 0
s Tarsius_wallacei.k141_254427                                 476  43 -     16117 ---------------------------------------------------------------------------------------------------------------------------------------------ccaaggtgtcatattt---tggg--agtagca-----tgtcca-gaactcca------tc
i Tarsius_wallacei.k141_254427                           I 44 C 0
s Theropithecus_gelada.CM009954.1                        186427057 116 + 186847797 T-ATGACCTGTTTCATG-------GGAG----------A--Cgag-caag-gggaagga---------------g--ag-a---------------gtga-CCT-T-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtaacatattt---tgga---gtcgta-----tatcca-gaacccCG------TC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          9456 116 -     20410 t-atgacctgtttcatg-------ggag----------a--caag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtgacatattt---tgga---gtagta-----tatcca-gaaccccA------TT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    13652 116 +     15221 t-atgacctgtttcatg-------ggag----------a--caag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtgacatattt---tgga---gtagta-----tatcca-gaaccccA------TT
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        9557 116 +     19930 t-atgacctgtttcatg-------ggag----------a--caag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtgacatattt---tgga---gtagta-----tatcca-gaaccccA------TT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       5984 116 -     19997 t-atgacctgtttcatg-------ggag----------a--caag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtgacatattt---tgga---gtagta-----tatcca-gaaccccA------TT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            46113 116 -     60166 t-atgacctgtttcatg-------ggag----------a--caag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgcca-t-------ttcctcaaatgccaaagtgacatattt---tgga---gtagta-----tatcca-gaaccccA------TT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        13579 116 -     27529 t-atgacctgtttcatg-------ggag----------a--caag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtgacatattt---tgga---gtagta-----tatcca-gaaccccA------TT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     13523 116 -     18194 t-atgacctgtttcatg-------ggag----------a--caag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtgacatattt---tgga---gtagta-----tatcca-gaaccccA------TT
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           7251 116 -     21137 t-atgacctgtttcatg-------ggag----------a--caag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtgacatattt---tgga---gtagta-----tatcca-gaaccccA------TT
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    5954 116 -     10723 t-atgacctgtttcatg-------ggag----------a--caag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtgacatattt---tgga---gtagta-----tatcca-gaaccccA------TT
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         5110 116 +      9834 t-atgacctgtttcatg-------ggag----------a--caag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtgacatattt---tgga---gtagta-----tatcca-gaaccccA------TT
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        23423 116 +     32220 t-atgacctgtttcatg-------ggag----------a--caag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtgacatattt---tgga---gtagta-----tatcca-gaaccccA------TT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5937525 116 +   6242583 t-atgacctgtttcatg-------ggag----------a--caag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgccg-t-------ttcctcaaatgccaaagtgacatattt---tgga---gtagta-----tatcca-gaaccccA------TT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        6778 116 +     20839 t-atgacctgtttcatg-------ggag----------a--caag-caag-gggaagga---------------g--ag-a---------------gtga-cct-t-tctgcat-ctgcca-t-------ttcctcaaatgccaaagtgacatattt---tgga---gtagta-----tatcca-gaaccccA------TT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2154854  71 +   4065304 -----------------------------------------------------------------------------------------------------CCA-C-TCTGcct-ttgctg-t-------tttctttaaTACCAAGGTGCCGTATTT---TAGG---GTAACATATCCT------GAATCCTG------TC
i Tupaia_chinensis.KB320699.1                            I 29 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     8502  71 -     10553 -----------------------------------------------------------------------------------------------------cca-c-tctgcct-ttgcta-t-------tttctttgataccaaggtgccgtattt---tagg---gtaacagctcct------gaatcctg------tc
i Tupaia_tana.TupTan_flattened_line_97126                I 29 C 0
s Varecia_rubra.k141_590885                                  10643 116 +     50397 t-atggcctgctgcagg-------ggag----------a--aggc-ttag-gggaagat---------------g--ag-a---------------gaga-cct-t-cctaCTT-GTCCAG-T-------TTCTCCCAATGCCAAGGTCCTATATTC---TGAA---GTAGCA-----TATCCA-GAATCCCA------TC
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             10698 116 +     24756 t-atggcctgctgcagg-------ggag----------a--aggc-ttag-gggaagat---------------g--ag-a---------------gaga-cct-t-cctaCTT-GTCCAG-T-------TTCTCCCAATGCCAAGGTCCTATATTC---TGAA---GTAGCA-----TATCCA-GAATCCCA------TC
i Varecia_variegata.k141_1128296                         C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        23287  97 -     24430 c-atgtcctgctctaag-------gtaa----------a----ag-acaaggagaagga---------------g--ac-a---------------g-ta-gcc-t-ccttttc-tgct-g-t-------ttcttcaaattcttaagtgccctattt---tggg---ggagca----------------------------
i Xerus_inauris.XerIna_scaffold_48378                    C 0 I 4
s Zapus_hudsonius.ZapHud_scaffold_11398                      14197  40 +     63895 ----------------------------------------------------------------------------------------------------------------------T--GT-------CTCCTCAAATGCTAAAGTGTCATATT-T--TGGA---GTAACA----------------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 44 I 12
e Echinops_telfairi.JH980293.1                            48779651 164 + 111700974 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276   0 +     12536 C
e Zalophus_californianus.ZalCal_flattened_line_17732          4349  55 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                  9981  55 -     43706 I
e Vicugna_pacos.KN270157.1                                 5371064  55 -   5488506 I
e Ursus_maritimus.KK499267.1                               4849611  55 -   5085361 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52652   8 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584   0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641   0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     80101  76 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   3761   0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937   0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    386403  55 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      117950  55 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 71325 110 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                 9779  70 +     41958 I
e Sus_scrofa.CM000828.4                                    6809663  77 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629              17502  55 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             29916  55 +     97271 I
e Sorex_araneus.JH798187.1                                13649852  60 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               2947  55 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11304   0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152480   8 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                86981  55 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        367482  20 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968   0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20273487  55 -  38429054 I
e Pteropus_vampyrus.KN525825.1                             1359049  55 +   4952924 I
e Pteropus_alecto.KB030862.1                              22975963  55 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         39415  55 +     42204 I
e Pteronotus_parnellii.KE909381.1                            13855  81 -     21811 I
e Procavia_capensis.ProCapCap_scaffold_85530                 11991 249 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090   0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             1020  56 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384   0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813   0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690  60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11828  55 -     78924 I
e Pantholops_hodgsonii.KE114653.1                          1265385   0 -   2937107 C
e Panthera_tigris.KE722367.1                               4720208  55 -   8748460 I
e Panthera_pardus.KV860321.1                                263570  55 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  150365  55 +    230217 I
e Ovis_canadensis.OviCan_scaffold_2572                      174468   0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491   0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       461535  55 -    559221 I
e Orycteropus_afer.OryAfe_flattened_line_144387               9003  16 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345   0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229   0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831   4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              505841  55 -   2017862 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Nyctereutes_procyonoides.CAJHUB010000658.1               9148567  55 -   9404916 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183   0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422   0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20306159  54 +  31847680 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187970 110 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_28916                        33185  55 +     33610 I
e Myotis_lucifugus.GL429869.1                              3902629  55 -   4330536 I
e Myotis_davidii.KB100139.1                                1586559  55 -   6019432 I
e Myotis_brandtii.KE162005.1                                278865  55 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               300393  55 -  14710649 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           5693  55 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   34613  55 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379  13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 140540  53 -    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466   0 -    437263 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         4903  55 -      8324 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             33502  55 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1849825  55 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                14559  88 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    20898  16 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961   0 +     10310 C
e Mellivora_capensis.MelCap_flattened_line_69365              9216  54 +     13704 I
e Megaderma_lyra.MegLyr_scaffold_4542                         9519 4280 -    207569 I
e Manis_pentadactyla.KN006162.1                              50341   0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352   0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 89799  48 +     94391 I
e Lycaon_pictus.CM007581.1                                17954313  55 -  59628241 I
e Loxodonta_africana.GL010049.1                            4216156 234 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268344   0 -    662738 C
e Leptonychotes_weddellii.KB714746.1                       3042035  55 +   3914936 I
e Lasiurus_borealis.LasBor_scaffold_50988                    12479 3019 +     29960 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650   0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493   0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293   0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626   0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547   0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  43658  55 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42403  64 +     43066 I
e Hipposideros_armiger.JXIK01000431.1                       110974  61 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577   3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_384612                 297 328 -       958 I
e Heterocephalus_glaber.JH602082.1                        20660051   0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516   0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               241501  55 +    327341 I
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312   0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  8618   0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20195104   0 + 205367284 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689   0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752   0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Equus_przewalskii.KK951119.1                               32375  55 +    498745 I
e Equus_caballus.CM000403.2                               18530360  55 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1282539  55 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2144621  55 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16328499  55 -  41312741 I
e Elephantulus_edwardii.JH947257.1                         1089466 1162 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347   0 +    607251 C
e Eidolon_helvum.KE759718.1                                   9707  55 +     11740 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175   0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084   0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    5228  56 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  672475  56 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8629030  76 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076   0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            62473   5 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923   0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569   0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             27664  55 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_37019               1802  50 -     19598 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          13502  50 -     20389 I
e Condylura_cristata.JH655891.1                           17547413   8 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            172152 108 +    839153 I
e Choloepus_didactylus.ChoDid_scaffold_45914                 17052 108 +     19366 I
e Chinchilla_lanigera.JH722012.1                           1251498   0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_713168             206   0 -      2554 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1652  56 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99291   0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417   0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157   0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     92176  78 +    217609 I
e Carollia_perspicillata.CarPer_scaffold_92756                4014  76 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030   0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310   0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18499585  55 +  63665305 I
e Canis_lupus_familiaris.chr16                            17958073  55 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9033808  55 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    184422  55 -    185531 I
e CanFam4.chr16                                           17798365  55 -  60362399 I
e Camelus_ferus.KB017975.1                                  402319  55 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2334036  55 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10001578  55 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2819682   0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014   0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932   0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376   0 +  48749331 C
e Bison_bison.KN261452.1                                    200171   0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115   0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905   0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440   0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3651  76 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675   0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      184239  76 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192   0 -   2318259 C
e Ailurus_fulgens.LNAC01001112.1                             78530  55 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9509749  55 -  29979442 I
e Acinonyx_jubatus.LLWD01001279.1                           826486  55 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       5360 4 +     62944 ACCA
s Acinonyx_jubatus.LLWD01001279.1                           826541 2 -   1699592 --ca
i Acinonyx_jubatus.LLWD01001279.1                        I 55 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9509804 2 -  29979442 --ca
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 55 C 0
s Ailurus_fulgens.LNAC01001112.1                             78585 2 -    347723 --ca
i Ailurus_fulgens.LNAC01001112.1                         I 55 C 0
s Allenopithecus_nigroviridis.k141_3361533                   13280 4 -     52922 aCCA
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         13221 4 -     28001 aCCA
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          3667 4 -     18505 aCCA
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           4516 4 -     12518 aCCA
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                              2077 4 -     27731 GCCA
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                2205 4 +      3134 GCCA
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               2337 4 -     45847 GCCA
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                23542 4 +     25266 GCCA
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           2727 4 +      2906 GCCA
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            16840 4 -     18578 GCCA
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              2229 4 +     47717 GCCA
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             2356 4 -      3544 GCCA
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             13577 4 +     50774 GCCA
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184315 2 +    412891 --ca
i Anoura_caudifer.AnoCau_scaffold_1412                   I 76 C 0
s Aotus_azarae.k141_3104676                                  14202 4 -     33861 GCCA
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            14222 4 -     34016 GCCA
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4296619 4 -   5030052 aCCA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             14224 4 -     34685 GCCA
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               27348 4 -     47192 GCCA
i Aotus_vociferans.k141_344750                           C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       10652 2 +     14667 --CA
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3727 2 +     43469 --ca
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 76 C 0
s Avahi_laniger.k141_765380                                  53033 4 -     92717 aCCA
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              53662 4 +     85213 ACCA
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             3964 4 -     10423 CCCT
i Callibella_humilis.k141_1278103                        C 0 I 1
s Callimico_goeldii.k141_1091182                             23449 4 +     31915 GCCT
i Callimico_goeldii.k141_1091182                         C 0 I 1
s Callithrix_geoffroyi.k119_512088                            3930 4 +      5267 GCCT
i Callithrix_geoffroyi.k119_512088                       C 0 I 1
s Callithrix_jacchus.pat_scaffold_3                       23589144 4 - 189096842 GCCT
i Callithrix_jacchus.pat_scaffold_3                      C 0 I 1
s Callithrix_kuhlii.k119_1164682                             10674 4 -     12001 GCCT
i Callithrix_kuhlii.k119_1164682                         C 0 I 1
s Camelus_bactrianus.KN276810.1                           10001633 2 -  17673402 --ca
i Camelus_bactrianus.KN276810.1                          I 55 C 0
s Camelus_dromedarius.KN272107.1                           2334091 2 -   7040546 --ca
i Camelus_dromedarius.KN272107.1                         I 55 C 0
s Camelus_ferus.KB017975.1                                  402374 2 -   1652518 --ca
i Camelus_ferus.KB017975.1                               I 55 C 0
s CanFam4.chr16                                           17798420 2 -  60362399 --ca
i CanFam4.chr16                                          I 55 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184477 2 -    185531 --ca
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 55 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9033863 2 -   9314153 --ca
i Canis_lupus_dingo.QKWQ01000480.1                       I 55 C 0
s Canis_lupus_familiaris.chr16                            17958128 2 -  59632846 --ca
i Canis_lupus_familiaris.chr16                           I 55 C 0
s Canis_lupus_orion.HG994398.1                            18499640 2 +  63665305 --ca
i Canis_lupus_orion.HG994398.1                           I 55 C 0
s Carlito_syrichta.NW_007247396.1                           200676 4 +    308752 ACCA
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                4090 2 -     11696 --ca
i Carollia_perspicillata.CarPer_scaffold_92756           I 76 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     92254 2 +    217609 --ca
i Catagonus_wagneri.CatWag_scaffold_2839                 I 78 C 0
s Cebuella_niveiventris.k141_1251222                          8589 4 -     11392 GCCT
i Cebuella_niveiventris.k141_1251222                     C 0 I 1
s Cebuella_pygmaea.k141_1309012                               4687 4 -      7577 GCCT
i Cebuella_pygmaea.k141_1309012                          C 0 I 1
s Cebus_albifrons.Contig27                                25650711 4 +  26074798 GCCA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_398305                                  288 4 +      1777 GCCA
i Cebus_olivaceus.k141_398305                            C 0 C 0
s Cebus_unicolor.k141_544048                                 48619 4 -     74725 GCCA
i Cebus_unicolor.k141_544048                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         4691 4 +     31688 ACCA
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12230681 2 +  27778364 --ca
i Ceratotherium_simum.JH767749.1                         I 56 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1708 2 -     25243 --ca
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 56 C 0
s Cercocebus_atys.KQ010504.1                               4474233 4 +   4669795 acca
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        12782 4 -     19203 aCCA
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           7204 4 +      8260 aCCA
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           7430 4 +     27781 aCCA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         7590 4 -     20310 aCCG
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          10569 4 +     29689 aCCG
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            5000 4 +      9989 aCCG
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          13248 4 -     27936 aCCA
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            2114 4 -     17152 aCCA
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38815652 4 +  39242232 aCCG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21221343 4 -  21565898 aCCA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       38461 4 -     53127 aCCA
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        5732 4 +      7159 aCCG
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       13264 4 -     27947 aCCA
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         13237 4 +     17596 aCCA
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          2471 4 +     26000 aCCA
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             20420 4 -     52598 CCCA
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           15787 4 +     57038 CCCA
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chlorocebus_aethiops.ctg25                              18427221 4 -  18827391 aCCA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       13658 4 -     50209 aCCA
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135420658 4 + 135778131 ACCA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1909171 4 +   2368649 acca
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199948849 4 + 200372422 aCCA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              35709 4 +     84244 aCCA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          13552 2 -     20389 --ta
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 50 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               1852 2 -     19598 --CA
i Crocidura_indochinensis.CroInd_scaffold_37019          I 50 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27719 2 -     87169 --ca
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 55 C 0
s Daubentonia_madagascariensis.ctg71                      12536650 4 -  12879189 ACCA
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8629106 2 +  20541912 --cc
i Desmodus_rotundus.KZ672289.1                           I 76 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672531 2 +   1390856 --ca
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 56 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    5284 2 +    198055 --ca
i Diceros_bicornis.DicBicMic_scaffold_5955               I 56 C 0
s Eidolon_helvum.KE759718.1                                   9762 2 +     11740 --ca
i Eidolon_helvum.KE759718.1                              I 55 C 0
s Enhydra_lutris.KZ291758.1                               16328554 2 -  41312741 --ca
i Enhydra_lutris.KZ291758.1                              I 55 C 0
s Eptesicus_fuscus.JH977646.1                              2144676 2 -  14770903 --ca
i Eptesicus_fuscus.JH977646.1                            I 55 C 0
s Equus_asinus.JREZ01000139.1                              1282594 2 +   4378816 --ca
i Equus_asinus.JREZ01000139.1                            I 55 C 0
s Equus_caballus.CM000403.2                               18530415 2 -  39960074 --ca
i Equus_caballus.CM000403.2                              I 55 C 0
s Equus_przewalskii.KK951119.1                               32430 2 +    498745 --ca
i Equus_przewalskii.KK951119.1                           I 55 C 0
s Erythrocebus_patas.Contig38                             21203829 4 -  21539334 aCCA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13139 4 -     14127 ACCA
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                5837 4 -     16928 ACCA
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              14866 4 -     25546 ACCA
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12064 4 +     26330 aTCA
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 13304 4 +     23973 ACCA
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12064 4 +     75513 aTCA
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10002 4 +     97555 ACCA
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            12921 4 +     26496 aCCA
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  3539 4 -     17153 ACCA
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13115 4 +    111500 ACCA
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Galago_moholi.ctg2040                                     425600 2 -    453645 --CA
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             3307 2 +     11339 --CA
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                             610 2 +     41679 --CA
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840                421 4 -      9135 ATCA
i Galeopterus_variegatus.GalVar_scaffold_108840          I 12 C 0
s Gorilla_beringei.k141_3596273                              14614 4 -     32273 aCCA
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186336761 4 + 186649187 acca
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6194 4 -     19426 ACCA
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             11343 4 -     15286 ACCA
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             12982 4 +     18253 ACCA
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13083 4 -     41752 ACCA
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         12921 4 -     16460 ACCA
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               241556 2 +    327341 --ca
i Helogale_parvula.HelPar_flattened_line_2585            I 55 C 0
s Hipposideros_armiger.JXIK01000431.1                       111035 2 +   1711038 --ca
i Hipposideros_armiger.JXIK01000431.1                    I 61 I 45
s Hipposideros_galeritus.HipGal_scaffold_29171               42467 2 +     43066 --ca
i Hipposideros_galeritus.HipGal_scaffold_29171           I 64 I 44
s Hoolock_leuconedys.ctg274                                    433429 4 +    630532 aCCA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  43713 2 +     55795 --ca
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 55 C 0
s Hylobates_agilis.k141_232023                                1195 4 -     12752 ACCG
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                               1239 4 +     14092 ACCG
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189542022 4 - 191637585 ACCG
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3334916 4 -  11177569 ACCG
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_3655594                                   21886 4 +     31101 ACCA
i Indri_indri.k141_3655594                               C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    13087 2 -     42476 --ca
i Lasiurus_borealis.LasBor_scaffold_32767                I 111 C 0
s Lemur_catta.scaffold_24                                 15523426 4 -  30322482 ACCA
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        6219 4 +     64341 GCCT
i Leontocebus_fuscicollis.k141_1820339                   C 0 I 1
s Leontocebus_illigeri.k141_3350179                           3546 4 +      4941 GCCT
i Leontocebus_illigeri.k141_3350179                      C 0 I 1
s Leontocebus_nigricollis.k141_4610752                        6262 4 +     35603 GCCT
i Leontocebus_nigricollis.k141_4610752                   C 0 I 1
s Leontopithecus_chrysomelas.k141_1519602                    27739 4 +     38576 GCCT
i Leontopithecus_chrysomelas.k141_1519602                C 0 I 1
s Leontopithecus_rosalia.k141_464620                         24436 4 +     66356 ACCT
i Leontopithecus_rosalia.k141_464620                     C 0 I 1
s Lepilemur_ankaranensis.k141_596936                         10310 4 -     23766 aCCA
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             28376 4 +     45836 aCCA
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                           921 4 +     25010 ACCA
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      26312 4 +     54090 aCCA
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3042090 2 +   3914936 --ca
i Leptonychotes_weddellii.KB714746.1                     I 55 C 0
s Lepus_americanus.LepAme_scaffold_107385                     5529 4 -     14121 ACCA
i Lepus_americanus.LepAme_scaffold_107385                I 16 C 0
s Lophocebus_aterrimus.ctg367                              1435780 4 +   1826925 aCCA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            4987 2 +     11245 --CA
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1003837 2 +   6120653 --CA
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17954368 2 -  59628241 --ca
i Lycaon_pictus.CM007581.1                               I 55 C 0
s Macaca_arctoides.k141_2326796                               5595 4 +     40492 aCCA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59674857 4 +  60120075 aCCA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 11372 4 -     26193 aCCA
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            79155 4 -    114318 aCCA
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  4852 4 -     23192 aCCA
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                14314 4 -     29190 aCCA
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  22879 4 +     37952 aCCA
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186837970 4 + 187317192 acca
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25456531 4 -  25927173 acca
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  78730 4 +     89720 aCCA
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 5728 4 +     20474 aCCA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   5528 4 -     14993 aCCA
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  328399 4 -    668171 aCCA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 3840 4 -     24072 aCCA
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               24467 4 -     45290 aCCA
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 89847 2 +     94391 --ca
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 48 C 0
s Mandrillus_leucophaeus.scaffold280                      23936053 4 -  24302211 aCCA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               350183 4 +    752769 aCCA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        13799 2 -    207569 --ag
i Megaderma_lyra.MegLyr_scaffold_4542                    I 4280 T 4228
s Mellivora_capensis.MelCap_flattened_line_69365              9270 2 +     13704 --ca
i Mellivora_capensis.MelCap_flattened_line_69365         I 54 C 0
s Mico_argentatus.k141_1239457                                4504 4 -      7380 GCCT
i Mico_argentatus.k141_1239457                           C 0 I 1
s Mico_humeralifer.k141_1976199                               3577 4 +     18990 GCCT
i Mico_humeralifer.k141_1976199                          C 0 I 1
s Mico_schneideri.k141_1950671                                      4516 4 -      7356 GCCT
i Mico_schneideri.k141_1950671                                 C 0 I 1
s Microcebus_murinus.CM007674.1                           18290826 4 -  93316391 ACCA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                14647 2 -     19307 --ca
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 88 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849880 2 +   8254450 --ca
i Miniopterus_natalensis.LDJU01000034.1                  I 55 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             33557 2 +     64694 --ca
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 55 C 0
s Miopithecus_ogouensis.k141_534055                           7778 4 -     28506 aCCG
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         4958 2 -      8324 --ca
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 55 C 0
s Mirza_zaza.k141_952172                                      8377 4 -     37649 ATCA
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140593 2 -    366855 --ca
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 53 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   34668 2 +     37127 --ca
i Mungos_mungo.MunMun_flattened_line_23663               I 55 C 0
s Murina_feae.MurFea_scaffold_85699                           5748 2 +     14753 --ca
i Murina_feae.MurFea_scaffold_85699                      I 55 C 0
s Mustela_putorius.JH418006.1                               300448 2 -  14710649 --ca
i Mustela_putorius.JH418006.1                            I 55 C 0
s Myotis_brandtii.KE162005.1                                278920 2 -  10118263 --ca
i Myotis_brandtii.KE162005.1                             I 55 C 0
s Myotis_davidii.KB100139.1                                1586614 2 -   6019432 --ca
i Myotis_davidii.KB100139.1                              I 55 C 0
s Myotis_lucifugus.GL429869.1                              3902684 2 -   4330536 --ca
i Myotis_lucifugus.GL429869.1                            I 55 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        33240 2 +     33610 --ca
i Myotis_myotis.MyoMyo_scaffold_28916                    I 55 C 0
s Nasalis_larvatus.k141_413338                               13773 4 +     21681 aCCA
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9148622 2 -   9404916 --ca
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 55 C 0
s Nycticebus_bengalensis.LG01                            102578813 2 - 196305487 --CA
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_771082                               658 2 -      2667 --CA
i Nycticebus_coucang.k141_771082                         C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749234 2 + 199412804 --CA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1362649 4 +   3988456 ACCA
i Ochotona_princeps.JH802162.1                           I 12 C 0
s Odobenus_rosmarus.KB229312.1                              505896 2 -   2017862 --ca
i Odobenus_rosmarus.KB229312.1                           I 55 C 0
s Oryctolagus_cuniculus.CM000791.1                        67146358 4 + 174332312 ACCA
i Oryctolagus_cuniculus.CM000791.1                       I 16 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       461590 2 -    559221 --ca
i Otocyon_megalotis.JAEUCK010005147.1                    I 55 C 0
s Otolemur_crassicaudatus.k141_222918                         3132 2 +      8798 --CA
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             695296 2 -   1103335 --CA
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    42708 4 +     80009 acca
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189141618 4 + 189151597 acca
i Pan_troglodytes.CM009242.2                             I 142 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  150420 2 +    230217 --ca
i Panthera_onca.PanOnc_flattened_line_3271               I 55 C 0
s Panthera_pardus.KV860321.1                                263625 2 +  18783137 --ca
i Panthera_pardus.KV860321.1                             I 55 C 0
s Panthera_tigris.KE722367.1                               4720263 2 -   8748460 --ca
i Panthera_tigris.KE722367.1                             I 55 C 0
s Papio_anubis.CM001495.2                                183441807 4 + 183742232 acca
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             5501 4 +     20448 aCCA
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20562309 4 +  20919399 aCCA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   4245 4 +     41871 aCCA
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     7530 4 +     27711 aCCA
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  7608 4 +      9205 aCCA
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11883 2 -     78924 --ca
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 55 C 0
s Perodicticus_ibeanus.k141_855320                            9281 2 +     13100 --CA
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             7683 2 +     25941 --CA
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Piliocolobus_badius.k141_1234363                           42269 4 +     62158 aCCA
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        37000 4 +     89929 aCCA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            38416 4 +     51399 aCCA
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14294654 4 -  14605196 acca
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1076 2 +     22620 --ca
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 56 C 0
s Pongo_abelii.CM009266.2                                189129752 4 + 189387572 acca
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9569360 4 +   9816681 aCCA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               71941 4 -     81375 aCCA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              3761 4 +     19060 aCCA
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2596104 4 -   4620579 acca
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990074 4 +   2598838 ACCA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          28384 4 +     38485 aCCA
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                               429 4 -     13098 aCCA
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          25905 4 +     35766 aCCA
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4093 4 -     24134 aCCA
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        27915 4 -     67325 aCCA
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4137 4 -      6182 aCCA
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            13936 2 -     21811 --ca
i Pteronotus_parnellii.KE909381.1                        I 81 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39470 2 +     42204 --ca
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 55 C 0
s Pteropus_alecto.KB030862.1                              22976018 2 +  28871421 --ca
i Pteropus_alecto.KB030862.1                             I 55 C 0
s Pteropus_vampyrus.KN525825.1                             1359104 2 +   4952924 --ca
i Pteropus_vampyrus.KN525825.1                           I 55 C 0
s Puma_concolor.QAVW01001104.1                            20273542 2 -  38429054 --ca
i Puma_concolor.QAVW01001104.1                           I 55 C 0
s Pygathrix_cinerea.k141_1153803                             13772 4 -     91421 aCCA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7607898 4 +   7812017 aCCA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             13746 4 -     72585 aCCA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        367502 2 -   3329780 --ta
i Rhinolophus_sinicus.LVEH01000134.1                     I 20 I 64
s Rhinopithecus_bieti.k119_217274                             5461 4 -     11128 aCCA
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91234821 4 - 195417433 accA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7670466 4 +   7961872 aCCA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87036 2 -     96226 --ca
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 55 C 0
s Saguinus_bicolor.k141_2619299                               6928 4 -      8359 GCCT
i Saguinus_bicolor.k141_2619299                          C 0 I 1
s Saguinus_imperator.k141_2524406                              869 4 +      2197 GCCT
i Saguinus_imperator.k141_2524406                        C 0 I 1
s Saguinus_inustus.k141_699149                               12291 4 +     13640 GCCT
i Saguinus_inustus.k141_699149                           C 0 I 1
s Saguinus_labiatus.k141_285685                               7155 4 +      8564 GCCT
i Saguinus_labiatus.k141_285685                          C 0 I 1
s Saguinus_midas.LG03                                    209468003 4 + 209938924 GCCT
i Saguinus_midas.LG03                                    C 0 I 1
s Saguinus_mystax.k141_374627                                 6717 4 -      9399 GCCT
i Saguinus_mystax.k141_374627                            C 0 I 1
s Saimiri_boliviensis.NW_024100920.1                     119949981 4 - 121099817 ACCA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       22437 4 +     46362 aCCA
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               22532 4 +     45824 aCCA
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             39160 4 -     64574 aCCA
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               2166 4 -     23631 aCCA
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 22425 4 -     61129 aCCA
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5419375 4 -   5703754 GCCA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          54416 4 -     80660 GCCA
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Semnopithecus_entellus.k141_11662                          18278 4 -     19888 ACCA
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      25481 4 +     39453 ACCA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            6000 4 +     27826 ACCA
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             5520 4 -     19483 ACCA
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      5589 4 +      7198 ACCA
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         13847 4 +     15514 ACCA
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               3002 2 +   1910179 --ta
i Solenodon_paradoxus.SolPar_flattened_line_126          I 55 C 0
s Sorex_araneus.JH798187.1                                13649912 2 -  18376816 --ca
i Sorex_araneus.JH798187.1                               I 60 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             29971 2 +     97271 --ca
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 55 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              17557 2 -    196729 --ca
i Suricata_suricatta.SurSur_flattened_line_6629          I 55 C 0
s Sus_scrofa.CM000828.4                                    6809740 2 +  69701581 --ca
i Sus_scrofa.CM000828.4                                  I 77 C 0
s Symphalangus_syndactylus.tarseq_199                      1092064 4 -   1523678 ACCA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 9849 2 +     41958 --ca
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 70 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118005 2 -    156842 --ca
i Tapirus_indicus.TapInd_scaffold_9301                   I 55 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    386458 2 +    539355 --ca
i Tapirus_terrestris.TapTer_scaffold_755                 I 55 C 0
s Tarsius_lariang.k141_2201908                               25684 4 +     70052 aCCA
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                 519 4 -     16117 aCCA
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186427173 4 + 186847797 acca
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     80177 2 +    610378 --ca
i Tonatia_saurophila.TonSau_scaffold_294                 I 76 C 0
s Trachypithecus_auratus.k141_722599                          9572 4 -     20410 ACCA
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    13768 4 +     15221 ACCA
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        9673 4 +     19930 ACCA
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       6100 4 -     19997 ACCA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            46229 4 -     60166 ACCA
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        13695 4 -     27529 ACCA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     13639 4 -     18194 ACCA
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           7367 4 -     21137 ACCA
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    6070 4 -     10723 ACCA
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         5226 4 +      9834 ACCA
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        23539 4 +     32220 ACCA
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5937641 4 +   6242583 ACCA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        6894 4 +     20839 ACCA
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2154925 4 +   4065304 ACCA
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     8573 4 -     10553 aCCA
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4849666 2 -   5085361 --ca
i Ursus_maritimus.KK499267.1                             I 55 C 0
s Varecia_rubra.k141_590885                                  10759 4 +     50397 ACCA
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             10814 4 +     24756 ACCA
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371119 2 -   5488506 --ca
i Vicugna_pacos.KN270157.1                               I 55 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10036 2 -     43706 --ca
i Vulpes_lagopus.VulLag_flattened_line_30954             I 55 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          4404 2 +     86975 --ca
i Zalophus_californianus.ZalCal_flattened_line_17732     I 55 C 0
e Echinops_telfairi.JH980293.1                            48779651 164 + 111700974 I
e Chiropotes_albinasus.k141_2813271                           9780 103 +     11226 I
e Mus_pahari.LT608297.1                                   31354316 4 -  89631738 I
e Mus_spretus.CM004101.1                                  90751721 4 - 130317789 I
e Mus_musculus.chr8                                       87649660 4 - 129401213 I
e Mus_caroli.LT608237.1                                   84360660 4 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      14237 12 +     63895 I
e Xerus_inauris.XerIna_scaffold_48378                        23384 4 -     24430 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   52652 8 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   3761 0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937 0 +    114563 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 71325 110 +    116680 I
e Spermophilus_dauricus.KZ294078.1                         1952401 4 -   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11304 0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152480 8 -    313613 I
e Rattus_norvegicus.chr16                                 53569933 4 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Psammomys_obesus.NESX01036370.1                             9707 4 -     21651 I
e Procavia_capensis.ProCapCap_scaffold_85530                 11991 249 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813 0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18194067 4 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Orycteropus_afer.OryAfe_flattened_line_144387               9003 16 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    79446 4 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                    3529 4 -     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20306159 54 +  31847680 I
e Nannospalax_galili.KL204047.1                            2033149 10 -   3037898 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187970 110 +    196477 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    20898 16 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12181538 4 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 32073 4 +    140813 I
e Marmota_marmota.CZRN01000018.1                          33101513 4 -  40650429 I
e Manis_pentadactyla.KN006162.1                              50341 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352 0 +    737560 C
e Loxodonta_africana.GL010049.1                            4216156 234 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Ictidomys_tridecemlineatus.JH393364.1                    7519204 4 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      81626 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547 0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_384612                 297 328 -       958 I
e Heterocephalus_glaber.JH602082.1                        20660051 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  8618 0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20195104 0 + 205367284 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Ellobius_talpinus.LOJH01109367.1                             531 4 +      6299 I
e Ellobius_lutescens.LOEQ01008920.1                          90349 4 +    110024 I
e Elephantulus_edwardii.JH947257.1                         1089466 1162 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084 0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            62473 5 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    836452 4 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11666856 4 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 49391 4 +     63868 I
e Condylura_cristata.JH655891.1                           17547413 8 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            172152 108 +    839153 I
e Choloepus_didactylus.ChoDid_scaffold_45914                 17052 108 +     19366 I
e Chinchilla_lanigera.JH722012.1                           1251498 0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_713168             206 0 -      2554 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157 0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    136758 0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      11139 4 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     73957 12 -     89534 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     69805 4 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       5364 34 +     62944 T-----------------A-------------------T----G---T-AAATTATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
s Acinonyx_jubatus.LLWD01001279.1                           826543 34 -   1699592 t-----------------t-------------------c----a---g-aaatcatac-c-tca-ataaaccc----tga-ctg-t----------a
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 1
s Acomys_cahirinus.AcoCah_scaffold_12655                     69809 22 +     87051 A-----------------ACA-CAC-A-T-TCT-AT-AC----A---T-TGGT--------------------------------------------
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 4 I 92
s Ailuropoda_melanoleuca.LNAT01000098.1                    9509806 34 -  29979442 t-----------------a-------------------c----a---c-aaattatac-c-gca-ataaatcg----tga-ctg-c----------a
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 1
s Ailurus_fulgens.LNAC01001112.1                             78587 34 -    347723 t-----------------a-------------------c----a---c-aaattatat-c-tca-ataaaccc----tga-ttg-c----------a
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 1
s Allactaga_bullata.AllBul_scaffold_9566                     73969 42 -     89534 A-----------------A-------------------TCTACAGAAA-AAATTATAC-C-TTA-GTAAAGCA----GGA-CTTTA----------A
i Allactaga_bullata.AllBul_scaffold_9566                 I 12 I 1
s Allenopithecus_nigroviridis.k141_3361533                   13284 34 -     52922 T-----------------A-------------------T----G---T-AAATTATAC-C-TCA-ATCAACCC----TGA-CTT-T----------A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         13225 34 -     28001 T-----------------A-------------------T----G---T-AAATTGTAC-C-TCA-ATCAACCC----TGA-CTT-T----------A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          3671 34 -     18505 T-----------------A-------------------T----G---T-AAATTGTAC-C-TCA-ATCAACCC----TGA-CTT-T----------A
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           4520 34 -     12518 T-----------------A-------------------T----G---T-AAATTGTAC-C-TCA-ATCAACCC----TGA-CTT-T----------A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                              2081 34 -     27731 T-----------------A-------------------T----G---T-AAATCATAG-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                2209 34 +      3134 T-----------------A-------------------T----G---T-AAATCATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               2341 34 -     45847 T-----------------A-------------------T----G---T-AAATCATAG-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                23546 34 +     25266 T-----------------A-------------------T----G---T-AAATCATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           2731 34 +      2906 T-----------------A-------------------T----G---T-AAATCATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            16844 34 -     18578 T-----------------A-------------------T----G---T-AAATCATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              2233 34 +     47717 T-----------------A-------------------T----G---T-AAATCATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             2360 34 -      3544 T-----------------A-------------------T----G---T-AAACCATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             13581 34 +     50774 T-----------------A-------------------T----G---T-AAATCATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184317 34 +    412891 t-----------------a-------------------c----a---t-aaattatat-c-tca-ataaGCCC----TAA-CTG-T----------T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 1
s Aotus_azarae.k141_3104676                                  14206 34 -     33861 T-----------------A-------------------T----G---T-AAATCATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            14226 34 -     34016 T-----------------A-------------------T----G---T-AAATCATAC-G-TTA-ATCAACCC----TGA-CTT-T----------A
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4296623 34 -   5030052 T-----------------A-------------------T----G---T-AAATCATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             14228 34 -     34685 T-----------------A-------------------T----G---T-AAATCATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               27352 34 -     47192 T-----------------A-------------------T----G---T-AAATCATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      11143 46 +     20879 CAGAAACCCATCATC-ATA-------------------C----A---T-AAATTATTC-T-C-----AAATCC----TGA-CTT-T----------A
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 4 I 1
s Arctocebus_calabarensis.k141_2318572                       10654 34 +     14667 T-----------------A-------------------C----A---T-AAATTATAC-C-TCA-AGCAACCC----AAA-CTT-T----------G
i Arctocebus_calabarensis.k141_2318572                   C 0 I 1
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3729 34 +     43469 t-----------------a-------------------c----a---c-aaattatat-c-tca-ataagctc----tga-ctg-t----------a
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 1
s Avahi_laniger.k141_765380                                  53037 34 -     92717 T-----------------A-------------------T----G---T-AAATTATAC-C-TCA-ATAAACCC----TGA-CTT-T----------G
i Avahi_laniger.k141_765380                              C 0 I 1
s Avahi_peyrierasi.k141_1424874                              53666 34 +     85213 T-----------------A-------------------T----G---T-AAATTATAC-C-TCA-ATAAACCC----TGA-CTT-T----------G
i Avahi_peyrierasi.k141_1424874                          C 0 I 1
s Callibella_humilis.k141_1278103                             3969 31 -     10423 --------------------------------------T----C---T-GAATCATAC-T--TA-ATCAACCG----TGA-CTT-T----------A
i Callibella_humilis.k141_1278103                        I 1 C 0
s Callimico_goeldii.k141_1091182                             23454 31 +     31915 --------------------------------------T----C---T-AAATCATAC-C--TA-GTCAACCC----TGA-CTT-G----------A
i Callimico_goeldii.k141_1091182                         I 1 C 0
s Callithrix_geoffroyi.k119_512088                            3935 31 +      5267 --------------------------------------T----C---T-GAATCGTAC-T--TA-ATCAACCG----TGA-CTT-T----------A
i Callithrix_geoffroyi.k119_512088                       I 1 C 0
s Callithrix_jacchus.pat_scaffold_3                       23589149 31 - 189096842 --------------------------------------T----C---T-GAATCATAC-T--TA-ATCAACCG----TGA-CTT-T----------A
i Callithrix_jacchus.pat_scaffold_3                      I 1 C 0
s Callithrix_kuhlii.k119_1164682                             10679 31 -     12001 --------------------------------------T----C---T-GAATCATAC-T--TA-ATCAACCG----TGA-CTT-T----------A
i Callithrix_kuhlii.k119_1164682                         I 1 C 0
s Camelus_bactrianus.KN276810.1                           10001635 34 -  17673402 c-----------------a-------------------c----a---t-aagttacat-c-tca-ataaactc----taa-ctg-t----------a
i Camelus_bactrianus.KN276810.1                          C 0 I 1
s Camelus_dromedarius.KN272107.1                           2334093 34 -   7040546 c-----------------a-------------------c----a---t-aagttacat-c-tca-ataaactc----taa-ctg-t----------a
i Camelus_dromedarius.KN272107.1                         C 0 I 1
s Camelus_ferus.KB017975.1                                  402376 34 -   1652518 c-----------------a-------------------c----a---t-aagttacat-c-tca-ataaactc----taa-ctg-t----------a
i Camelus_ferus.KB017975.1                               C 0 I 1
s CanFam4.chr16                                           17798422 34 -  60362399 t-----------------a-------------------c----a---c-aaattatac-c-tca-atagaccc----tga-ctg-c----------a
i CanFam4.chr16                                          C 0 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184479 34 -    185531 t-----------------a-------------------c----a---c-aaattatac-c-tca-atagaccc----tga-ctg-c----------a
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 I 1
s Canis_lupus_dingo.QKWQ01000480.1                         9033865 34 -   9314153 t-----------------a-------------------c----a---c-aaattatac-c-tca-atagaccc----tga-ctg-c----------a
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 1
s Canis_lupus_familiaris.chr16                            17958130 34 -  59632846 t-----------------a-------------------c----a---c-aaattatac-c-tca-atagaccc----tga-ctg-c----------a
i Canis_lupus_familiaris.chr16                           C 0 I 1
s Canis_lupus_orion.HG994398.1                            18499642 34 +  63665305 t-----------------a-------------------c----a---c-aaattatac-c-tca-atagaccc----tga-ctg-c----------a
i Canis_lupus_orion.HG994398.1                           C 0 I 1
s Carlito_syrichta.NW_007247396.1                           200680 34 +    308752 T-----------------G-------------------C----A---T-AAATTTTGC-C-TCA-ATAAATCC----TGA-CTT-T----------C
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                4092 34 -     11696 c-----------------a-------------------c----a---t-aaattatat-c-tca-ataaggcc----taa-ctg-t----------a
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 1
s Catagonus_wagneri.CatWag_scaffold_2839                     92256 31 +    217609 t-----------------g-------------------t----a---t-aaactacat-c-tca-a---GTTC----TAA-CCA-T----------A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 1
s Cebuella_niveiventris.k141_1251222                          8594 31 -     11392 --------------------------------------T----C---T-GAGTCATAT-T--TA-ATCAACCG----TGA-CTT-T----------A
i Cebuella_niveiventris.k141_1251222                     I 1 C 0
s Cebuella_pygmaea.k141_1309012                               4692 31 -      7577 --------------------------------------T----C---T-GAATCATAC-T--TA-ATCAACCG----TGA-CTT-T----------A
i Cebuella_pygmaea.k141_1309012                          I 1 C 0
s Cebus_albifrons.Contig27                                25650715 34 +  26074798 T-----------------A-------------------T----A---T-AAATCGTAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_398305                                  292 34 +      1777 T-----------------A-------------------T----A---T-AAATCGTAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Cebus_olivaceus.k141_398305                            C 0 C 0
s Cebus_unicolor.k141_544048                                 48623 34 -     74725 T-----------------A-------------------T----A---T-AAATCGTAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Cebus_unicolor.k141_544048                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         4695 34 +     31688 T-----------------G-------------------C----A---T-AAATTTTGC-C-TCA-ATAAATCC----TGA-CTT-T----------C
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12230683 34 +  27778364 t-----------------t-------------------c----a---t-aaattatat-c-tca-ataaacac----taa-tta-t----------a
i Ceratotherium_simum.JH767749.1                         C 0 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1710 34 -     25243 t-----------------t-------------------c----a---t-aaattatat-c-tca-ataaacac----taa-tta-t----------a
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 I 1
s Cercocebus_atys.KQ010504.1                               4474237 34 +   4669795 t-----------------a-------------------t----g---t-aaattatac-c-tca-atcaACCC----TGA-CTT-T----------A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        12786 34 -     19203 T-----------------A-------------------T----G---T-AAATTATAC-C-TCA-ATCAACCC----TGA-CTT-T----------A
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           7208 34 +      8260 T-----------------A-------------------T----G---T-AAATTATAC-C-TCA-ATCAACCC----TGA-CTT-T----------A
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           7434 34 +     27781 T-----------------A-------------------T----G---T-AAATTATAC-C-TCA-ATCAACCC----TGA-CTT-T----------A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         7594 34 -     20310 T-----------------A-------------------T----G---T-AAATTATAC-C-TCA-ATCAACCC----TGA-CTT-T----------A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          10573 34 +     29689 T-----------------A-------------------T----G---T-AAATTATAC-C-TCA-ATCAACCC----TGA-CTT-T----------A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            5004 34 +      9989 T-----------------A-------------------C----G---T-AAATTATAC-C-TCA-ATCAACCC----TGA-CTT-A----------A
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          13252 34 -     27936 T-----------------A-------------------T----G---T-AAATTATAC-C-TCA-ATCAACCC----TGA-CTT-T----------A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            2118 34 -     17152 T-----------------A-------------------T----G---T-AAATTATAC-C-TCA-ATCAACCC----TGA-CTT-T----------A
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38815656 34 +  39242232 T-----------------A-------------------T----G---T-AAATTATAC-C-TCA-ATCAACCC----TGA-CTT-T----------A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21221347 34 -  21565898 T-----------------A-------------------T----G---T-AAATTATAC-T-TCA-ATCAACCC----TGA-CTT-T----------A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       38465 34 -     53127 T-----------------A-------------------T----G---T-AAATTATAC-C-TCA-ATCAACCC----TGA-CTT-T----------A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        5736 34 +      7159 T-----------------A-------------------T----G---T-AAATTATAC-C-TCA-ATCAACCC----TGA-CTT-T----------A
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       13268 34 -     27947 T-----------------A-------------------T----G---T-AAATTATAC-C-TCA-ATCAACCC----TGA-CTT-T----------A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         13241 34 +     17596 T-----------------A-------------------T----G---T-AAATTATAC-C-TCA-ATCAACCC----TGA-CTT-T----------A
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          2475 34 +     26000 T-----------------A-------------------T----G---T-AAATTATAC-C-TCA-ATCAACCC----TGA-CTT-T----------A
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             20424 34 -     52598 T-----------------A-------------------C----G---T-AAATTATAC-C-TCA-ATAAACCC----TGA-CTT-T----------G
i Cheirogaleus_major.k141_333249                         C 0 I 1
s Cheirogaleus_medius.k141_1055463                           15791 34 +     57038 T-----------------A-------------------C----G---T-AAATTATAC-C-TCA-ATAAACCT----TGA-CTT-T----------G
i Cheirogaleus_medius.k141_1055463                       C 0 I 1
s Chiropotes_albinasus.k141_2813271                           9883 19 +     11226 -------------------------------------------------------------TTA-ATCAACCC----TGA-CTT-T----------A
i Chiropotes_albinasus.k141_2813271                      I 103 C 0
s Chlorocebus_aethiops.ctg25                              18427225 34 -  18827391 T-----------------A-------------------T----G---T-AAATTGTAC-C-TCA-ATCAACCC----TGA-CTT-T----------A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       13662 34 -     50209 T-----------------A-------------------T----G---T-AAATTGTAC-C-TCA-ATCAACCC----TGA-CTT-T----------A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135420662 34 + 135778131 T-----------------A-------------------T----G---T-AAATTGTAC-C-TCA-ATCAACCC----TGA-CTT-T----------A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1909175 34 +   2368649 t-----------------a-------------------t----g---t-aaattatac-c-tta-atcaACCC----TGA-CTT-T----------A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199948853 34 + 200372422 T-----------------A-------------------T----G---T-AAATTATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              35713 34 +     84244 T-----------------A-------------------T----G---T-AAATTATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          13554 34 -     20389 t-----------------a-------------------c----a---t-aagttatat-c-tca-aaaa----gcCCTAA-CTA-T----------A
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 14
s Cricetomys_gambianus.CriGam_scaffold_18520                 49395 34 +     63868 A-----------------A-------------------T----A---G-TGATTATAC-C-TTA-ATAAATCC----TGA-CAT-T----------A
i Cricetomys_gambianus.CriGam_scaffold_18520             I 4 I 1
s Cricetulus_griseus.LT883664.1                           11666860 47 + 224834208 A-----------------AAA-C-CTA-T-TCC-AT-AC----A---T-TGATTAGAC-C-TTA-ATAATTAA----TGA-CTT-T----------A
i Cricetulus_griseus.LT883664.1                          I 4 I 1
s Crocidura_indochinensis.CroInd_scaffold_37019               1854 29 -     19598 A-----------------A-------------------G----A---T-AAAATATACCT-TCA-TAAATCTT----GA------------------
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 I 3
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27721 34 -     87169 t-----------------a-------------------c----a---g-aaattatgc-c-tca-ataaactc----tgg-cta-t----------a
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 1
s Ctenodactylus_gundi.CteGun_scaffold_65                    836456 34 +   1526836 C-----------------A-------------------C----A---C-AAATTATAC-C-TCA-ATAACTGC----TGA-CCT-T----------A
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 4 I 1
s Daubentonia_madagascariensis.ctg71                      12536654 34 -  12879189 T-----------------A-------------------C----A---T-AAATTATAC-C-TCA-ATAAACCC----TGA-CTT-T----------G
i Daubentonia_madagascariensis.ctg71                     C 0 I 1
s Desmodus_rotundus.KZ672289.1                             8629108 34 +  20541912 c-----------------a-------------------c----a---t-aaattataa-a-tca-gtaagccc----taa-ctg-t----------a
i Desmodus_rotundus.KZ672289.1                           C 0 I 1
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672533 34 +   1390856 t-----------------a-------------------c----a---t-aaattatat-c-tca-ataaaccc----taa-tta-t----------a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 1
s Diceros_bicornis.DicBicMic_scaffold_5955                    5286 34 +    198055 t-----------------t-------------------c----a---t-aaaatatat-c-tca-ataaaccc----taa-tta-t----------a
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 1
s Eidolon_helvum.KE759718.1                                   9764 34 +     11740 t-----------------a-------------------c----a---t-aagtaatat-c-tca-aaaggctC----TAA-CTG-T----------G
i Eidolon_helvum.KE759718.1                              C 0 I 1
s Ellobius_lutescens.LOEQ01008920.1                          90353 47 +    110024 A-----------------AAA-C-CTA-T-T-TCAT-AT----G---T-TGATTAGAC-C-TTA-GTAATTTC----tga-ctt-t----------a
i Ellobius_lutescens.LOEQ01008920.1                      I 4 I 1
s Ellobius_talpinus.LOJH01109367.1                             535 47 +      6299 C-----------------AAA-C-CTA-T-T-TCAT-AT----G---T-TGCTTAGAC-C-TTA-ATAATTTC----TGA-CTT-T----------A
i Ellobius_talpinus.LOJH01109367.1                       I 4 I 1
s Enhydra_lutris.KZ291758.1                               16328556 34 -  41312741 a-----------------a-------------------c----a---c-aaattatac-c-tca-ataaaccc----tga-ctg-c----------a
i Enhydra_lutris.KZ291758.1                              C 0 I 1
s Eptesicus_fuscus.JH977646.1                              2144678 44 -  14770903 t-----------------c-------------------c----a---t-aaattatat-g-tca-acaagcct----tgg-ctg-taaaaaaaaaaa
i Eptesicus_fuscus.JH977646.1                            C 0 I 1
s Equus_asinus.JREZ01000139.1                              1282596 34 +   4378816 t-----------------a-------------------c----a---t-aaattatat-c-tca-ataaaccc----tga-cca-t----------a
i Equus_asinus.JREZ01000139.1                            C 0 I 1
s Equus_caballus.CM000403.2                               18530417 34 -  39960074 t-----------------a-------------------c----a---t-aaattatat-c-tca-ataaaccc----tga-cca-t----------a
i Equus_caballus.CM000403.2                              C 0 I 1
s Equus_przewalskii.KK951119.1                               32432 34 +    498745 t-----------------a-------------------c----a---t-aaattatat-c-tca-ataaaccc----tga-cca-t----------a
i Equus_przewalskii.KK951119.1                           C 0 I 1
s Erythrocebus_patas.Contig38                             21203833 34 -  21539334 T-----------------A-------------------T----G---T-AAATTGTAC-C-TCA-ATCAACCC----TGA-CTT-T----------A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13143 34 -     14127 T-----------------A-------------------C----G---T-AAATTATAC-C-TCA-GTAAACCC----TGA-CTT-T----------G
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                5841 34 -     16928 T-----------------A-------------------C----A---T-AAATTATAC-C-TCA-GTAAACCC----TGA-CTT-T----------G
i Eulemur_collaris.k141_377015                           C 0 I 1
s Eulemur_coronatus.k141_885031                              14870 34 -     25546 T-----------------A-------------------T----G---T-AAATTATAC-C-TCA-GTAAACCC----TGA-CTT-T----------G
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12068 34 +     26330 T-----------------A-------------------C----G---T-AAATTATAC-C-TCA-GTAAACCC----TGA-CTT-T----------G
i Eulemur_flavifrons.k141_1184614                        C 0 I 2
s Eulemur_fulvus.k141_544389                                 13308 34 +     23973 T-----------------A-------------------C----G---T-AAATTATAC-C-TCA-GTAAACCC----TGA-CTT-T----------G
i Eulemur_fulvus.k141_544389                             C 0 I 1
s Eulemur_macaco.k141_1562045                                12068 34 +     75513 T-----------------A-------------------C----G---T-AAATTATAC-C-TCA-GTAAACCC----TGA-CTT-T----------G
i Eulemur_macaco.k141_1562045                            C 0 I 2
s Eulemur_mongoz.k141_232305                                 10006 34 +     97555 T-----------------A-------------------C----G---T-AAATTATAC-C-TCA-GTAAACCC----TGA-CTT-T----------G
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            12925 34 +     26496 T-----------------A-------------------T----G---T-AAATTATAC-C-TCA-GTAAACCC----TGA-CTT-T----------G
i Eulemur_rubriventer.k141_571033                        C 0 I 1
s Eulemur_rufus.k141_1476633                                  3543 34 -     17153 T-----------------A-------------------C----G---T-AAATTATAC-C-TCA-GTAAACCC----TGA-CTT-T----------G
i Eulemur_rufus.k141_1476633                             C 0 I 1
s Eulemur_sanfordi.k141_1122526                              13119 34 +    111500 T-----------------A-------------------C----G---T-AAATTATAC-C-TCA-GTAAACCC----TGA-CTT-T----------G
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Galago_moholi.ctg2040                                     425602 34 -    453645 C-----------------A-------------------C----A---T-AAATTATAC-C-TCA-ATCAACTC----TAA-CTT-T----------G
i Galago_moholi.ctg2040                                  C 0 I 1
s Galago_senegalensis.k141_631886                             3309 34 +     11339 C-----------------A-------------------C----A---T-AAATTATAC-C-TCA-ATCAACTC----TAA-CTT-T----------G
i Galago_senegalensis.k141_631886                        C 0 I 1
s Galagoides_demidoff.k141_1711393                             612 34 +     41679 C-----------------A-------------------C----A---T-AAATTATAC-C-TCA-ATCAACCC----TAA-CTT-T----------G
i Galagoides_demidoff.k141_1711393                       C 0 I 1
s Galeopterus_variegatus.GalVar_scaffold_108840                425 34 -      9135 C-----------------A-------------------C----A---T-AAATTATAC-T-TCA-ATAAACCT----TGA-CTT-C----------T
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 I 1
s Gorilla_beringei.k141_3596273                              14618 34 -     32273 T-----------------A-------------------T----G---T-AAATTATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186336765 34 + 186649187 t-----------------a-------------------t----g---t-aaattatac-c-tta-atcaACCC----TGA-CTT-T----------A
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6198 34 -     19426 T-----------------A-------------------C----G---T-AAATTATAC-C-TCA-ATAAACCC----TGA-TTT-T----------G
i Hapalemur_alaotrensis.k141_170648                      C 0 I 1
s Hapalemur_gilberti.k141_488810                             11347 34 -     15286 T-----------------A-------------------C----G---T-AAATTATAC-C-TCA-ATAAACCC----TGA-TTT-T----------G
i Hapalemur_gilberti.k141_488810                         C 0 I 1
s Hapalemur_griseus.k141_1511508                             12986 34 +     18253 T-----------------A-------------------C----G---T-AAATTATAC-C-TCA-ATAAACCC----TGA-TTT-T----------G
i Hapalemur_griseus.k141_1511508                         C 0 I 1
s Hapalemur_meridionalis.k141_248335                         13087 34 -     41752 t-----------------a-------------------t----g---t-aaattatac-c-tca-ataaaccc----tga-ttt-t----------g
i Hapalemur_meridionalis.k141_248335                     C 0 I 1
s Hapalemur_occidentalis.k141_907772                         12925 34 -     16460 T-----------------A-------------------C----G---T-AAATTATAC-C-TCA-ATAAACCC----TGA-TTT-T----------G
i Hapalemur_occidentalis.k141_907772                     C 0 I 1
s Helogale_parvula.HelPar_flattened_line_2585               241558 32 +    327341 t-----------------a-------------------c----a---g-aatttatac-c-tca-ataaac------tga-cta-t----------a
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 1
s Hipposideros_armiger.JXIK01000431.1                       111082 14 +   1711038 t-----------------g-------------------c----a---t-aaattatat---------------------------------------
i Hipposideros_armiger.JXIK01000431.1                    I 45 I 71
s Hipposideros_galeritus.HipGal_scaffold_29171               42513 14 +     43066 t-----------------g-------------------c----a---t-aaattatat---------------------------------------
i Hipposideros_galeritus.HipGal_scaffold_29171           I 44 I 71
s Hoolock_leuconedys.ctg274                                    433433 34 +    630532 T-----------------A-------------------T----G---T-AAATTATAC-C-TTA-ATCAACCC----TGA-CAT-T----------A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  43715 34 +     55795 t-----------------a-------------------c----a---g-aaattatac-c-tca-gtaaaccc----tga-ctg-t----------a
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 1
s Hylobates_agilis.k141_232023                                1199 34 -     12752 T-----------------A-------------------T----G---T-AAATTATAC-C-TTA-ATCAACCC----TGA-CAT-T----------A
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                               1243 34 +     14092 T-----------------A-------------------T----G---T-AAATTATAC-C-TTA-ATCAACCC----TGA-CAT-T----------A
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189542026 34 - 191637585 T-----------------A-------------------T----G---T-AAATTATAC-C-TTA-ATCAACCC----TGA-CAT-T----------A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3334920 34 -  11177569 T-----------------A-------------------T----G---T-AAATTATAC-C-TTA-ATCAACCC----TGA-CAT-T----------A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7519208 51 -   7955117 caaaagcccatcaCCCAta-------------------c----a---t-aaattattc-t-tta-ataaacCC----TAA-CTG-T----------A
i Ictidomys_tridecemlineatus.JH393364.1                  I 4 I 1
s Indri_indri.k141_3655594                                   21890 34 +     31101 T-----------------A-------------------C----G---T-AAATTATAC-C-TCA-ATAAACCC----TGA-CTT-T----------G
i Indri_indri.k141_3655594                               C 0 I 1
s Lasiurus_borealis.LasBor_scaffold_32767                    13089 42 -     42476 t-----------------c-------------------t----a---t-aaattatat-a-tca-acaagccc----tgg-ctg-taaaaaa--AAA
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 1
s Lemur_catta.scaffold_24                                 15523430 34 -  30322482 T-----------------A-------------------C----G---T-AAATTATAC-C-TCA-ATAAACCC----TGA-TTT-T----------G
i Lemur_catta.scaffold_24                                C 0 I 1
s Leontocebus_fuscicollis.k141_1820339                        6224 32 +     64341 --------------------------------------T----C---T-AAATCATA--CCTTA-ATCAACCC----TGA-CTT-T----------A
i Leontocebus_fuscicollis.k141_1820339                   I 1 C 0
s Leontocebus_illigeri.k141_3350179                           3551 32 +      4941 --------------------------------------T----C---T-AAATCATA--CCTTA-ATCAACCC----TGA-CTT-T----------A
i Leontocebus_illigeri.k141_3350179                      I 1 C 0
s Leontocebus_nigricollis.k141_4610752                        6267 32 +     35603 --------------------------------------T----C---T-AAATCATA--CCTTA-ATCAACCC----TGA-CTT-T----------A
i Leontocebus_nigricollis.k141_4610752                   I 1 C 0
s Leontopithecus_chrysomelas.k141_1519602                    27744 32 +     38576 --------------------------------------T----C---T-AAATCATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Leontopithecus_chrysomelas.k141_1519602                I 1 C 0
s Leontopithecus_rosalia.k141_464620                         24441 32 +     66356 --------------------------------------T----C---T-AAATCATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Leontopithecus_rosalia.k141_464620                     I 1 C 0
s Lepilemur_ankaranensis.k141_596936                         10314 34 -     23766 C-----------------A-------------------C----A---T-AAATTATAC-T-TCA-ATAAATCC----TGA-CTT-T----------G
i Lepilemur_ankaranensis.k141_596936                     C 0 I 1
s Lepilemur_dorsalis.k141_577674                             28380 34 +     45836 T-----------------A-------------------C----A---T-AAATTATAC-T-TCA-ATAAATCC----TGA-CTT-T----------G
i Lepilemur_dorsalis.k141_577674                         C 0 I 1
s Lepilemur_ruficaudatus.k141_121139                           925 34 +     25010 T-----------------A-------------------A----G---T-AAATTATAC-T-TCA-ATAAACCC----TGA-CTT-T----------G
i Lepilemur_ruficaudatus.k141_121139                     C 0 I 1
s Lepilemur_septentrionalis.k141_185316                      26316 34 +     54090 T-----------------A-------------------C----A---T-AAATTATAC-T-TCA-ATAAATCC----TGA-CTT-T----------G
i Lepilemur_septentrionalis.k141_185316                  C 0 I 1
s Leptonychotes_weddellii.KB714746.1                       3042092 34 +   3914936 t-----------------a-------------------c----a---c-aaattatac-c-tca-ataaacca----tga-ctg-c----------a
i Leptonychotes_weddellii.KB714746.1                     C 0 I 1
s Lepus_americanus.LepAme_scaffold_107385                     5533 27 -     14121 T-----------------C-------------------G----A---T-AAATTTTAC-C-TCAACAAACTCC------------------------
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 3
s Lophocebus_aterrimus.ctg367                              1435784 34 +   1826925 T-----------------A-------------------T----G---T-AAATTATAC-C-TCA-ATCAACCC----TGA-CTT-T----------A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            4989 33 +     11245 T-----------------A-------------------C----A---T-AAATT-TTC-C-TCA-ATCAACTC----AAA-CTT-T----------G
i Loris_lydekkerianus.k141_2539221                       C 0 I 1
s Loris_tardigradus.ctg83                                  1003839 33 +   6120653 T-----------------A-------------------C----A---T-AAATT-TTC-C-TCA-ATCAACTC----AAA-CTT-T----------G
i Loris_tardigradus.ctg83                                C 0 I 1
s Lycaon_pictus.CM007581.1                                17954370 34 -  59628241 t-----------------a-------------------c----a---c-aaattatac-c-tca-atagaccc----tga-ctg-c----------a
i Lycaon_pictus.CM007581.1                               C 0 I 1
s Macaca_arctoides.k141_2326796                               5599 34 +     40492 T-----------------C-------------------T----G---T-AAATCATAC-C-TCA-ATCAACCC----TGA-CTT-T----------A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59674861 34 +  60120075 T-----------------A-------------------T----G---T-AAATCATAC-C-TCA-GTCAACCC----TGA-CTT-T----------A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 11376 34 -     26193 T-----------------A-------------------T----G---T-AAATTATAC-C-TCA-ATCAACCC----TGA-CTT-T----------A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            79159 34 -    114318 T-----------------A-------------------T----G---T-AAATTATAC-C-TCA-ATCAACCC----TGA-CTT-T----------A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  4856 34 -     23192 T-----------------A-------------------T----G---T-AAATTATAC-C-TCA-ATCAACCC----TGA-CTT-T----------A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                14318 34 -     29190 T-----------------A-------------------T----G---T-AAATTATAC-C-TCA-ATCAACCC----TGA-CTT-T----------A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  22883 34 +     37952 T-----------------A-------------------T----G---T-AAATTATAC-C-TCA-ATCAACCC----TGA-CTT-T----------A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186837974 34 + 187317192 t-----------------a-------------------t----g---t-aaattatac-c-tca-atcaACCC----TGA-CTT-T----------A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25456535 34 -  25927173 t-----------------a-------------------t----g---t-aaattatac-c-tca-atcaACCC----TGA-CTT-T----------A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  78734 34 +     89720 T-----------------A-------------------T----G---T-AAATTATAC-C-TCA-ATCAACCC----TGA-CTT-T----------A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 5732 34 +     20474 T-----------------A-------------------T----G---T-AAATTATAC-C-TCA-ATCAACCC----TGA-CTT-T----------A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   5532 34 -     14993 T-----------------A-------------------T----G---T-AAATTATAC-C-TCA-ATCAACCC----TGA-CTT-T----------A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  328403 34 -    668171 T-----------------A-------------------T----G---T-AAATTATAC-C-TCA-ATCAACCC----TGA-CTT-T----------A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 3844 34 -     24072 T-----------------C-------------------T----G---T-AAATCATAC-C-TCA-ATCAACCC----TGA-CTT-T----------A
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               24471 34 -     45290 T-----------------A-------------------T----G---T-AAATTATAC-C-TCA-ATCAACCC----TGA-CTT-T----------A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 89849 34 +     94391 t-----------------a-------------------c----a---t-aagttatat-c-tca-aaaagcca----taa-ctg-t----------a
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 1
s Mandrillus_leucophaeus.scaffold280                      23936057 34 -  24302211 T-----------------A-------------------T----G---T-AAATTATAC-C-TCA-ATCAACCC----TGA-CTT-T----------A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               350187 34 +    752769 T-----------------A-------------------T----G---T-AAATTATAC-C-TCA-ATCAACCC----TGA-CTT-T----------A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33101517 51 -  40650429 caaaagcccatcaCCCATa-------------------c----a---t-aaattattc-t-tta-ataaacCC----TGA-CTG-T----------A
i Marmota_marmota.CZRN01000018.1                         I 4 I 1
s Megaderma_lyra.MegLyr_scaffold_4542                         9573 22 -    207569 t-----------------a-------------------c----g---t-aagttatag-c-ata-aaaa----------------------------
i Megaderma_lyra.MegLyr_scaffold_4542                    T 4228 I 13
s Mellivora_capensis.MelCap_flattened_line_69365              9272 34 +     13704 a-----------------a-------------------c----a---c-aaattatac-c-tca-ataaatcc----tga-ctg-c----------a
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 1
s Meriones_unguiculatus.MerUng_scaffold_7390                 32077 44 +    140813 A-----------------ACA-CAT-A-T-TCT-AT-AC----A---T-TTATGAGAC-T-TTA-ATAAATCT----TGA-C-C-------------
i Meriones_unguiculatus.MerUng_scaffold_7390             I 4 C 0
s Mesocricetus_auratus.KB708134.1                         12181542 47 -  29670104 A-----------------AAA-C-CTA-T-TCC-AT-AT----G---C-TGATTAGAC-C-TAA-ATAATTTC----TGA-CAT-T----------A
i Mesocricetus_auratus.KB708134.1                        I 4 I 1
s Mico_argentatus.k141_1239457                                4509 31 -      7380 --------------------------------------T----C---T-GAATCATAC-T--TA-ATCAACCG----TGA-CTT-T----------A
i Mico_argentatus.k141_1239457                           I 1 C 0
s Mico_humeralifer.k141_1976199                               3582 31 +     18990 --------------------------------------T----C---T-GAATCATAC-T--TA-ATCAACTG----TGA-CTT-T----------A
i Mico_humeralifer.k141_1976199                          I 1 C 0
s Mico_schneideri.k141_1950671                                      4521 31 -      7356 --------------------------------------T----C---T-GAATCATAC-T--TA-ATCAACCG----TGA-CTT-T----------A
i Mico_schneideri.k141_1950671                                 I 1 C 0
s Microcebus_murinus.CM007674.1                           18290830 34 -  93316391 T-----------------A-------------------t----g---t-aaatcatac-c-tca-ataaactC----TGA-CTT-T----------G
i Microcebus_murinus.CM007674.1                          C 0 I 1
s Micronycteris_hirsuta.MicHir_scaffold_52381                14649 34 -     19307 t-----------------a-------------------c----a---t-aaattatat-c-tca-ataagccc----taa-ctg-t----------a
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 1
s Miniopterus_natalensis.LDJU01000034.1                    1849882 31 +   8254450 t-----------------c-------------------c----a---t-aagttatag-c-tca-ataaGCCC----CAA-CT--------------
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 2
s Miniopterus_schreibersii.MinSch_scaffold_18080             33559 31 +     64694 t-----------------c-------------------c----a---t-aagttatag-c-tca-ataaGCCC----TAA-CT--------------
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 2
s Miopithecus_ogouensis.k141_534055                           7782 34 -     28506 T-----------------A-------------------T----G---T-AAATTATAC-C-TCA-ATCAACCC----TGA-CTT-T----------A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         4960 34 -      8324 t-----------------a-------------------c----a---c-aaattatac-c-tca-ataaacca----tga-ctg-c----------a
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 1
s Mirza_zaza.k141_952172                                      8381 34 -     37649 T-----------------A-------------------T----G---T-AAATCAGAC-C-TCA-ATAAACCC----TGA-CTT-T----------G
i Mirza_zaza.k141_952172                                 C 0 I 1
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140595 34 -    366855 t-----------------a-------------------c----a---t-aagttatat-c-tcc-ataagccc----taa-ctg-t----------a
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 1
s Mungos_mungo.MunMun_flattened_line_23663                   34670 32 +     37127 t-----------------a-------------------c----a---g-aaattatac-c-tca-ataaac------tga-cta-t----------a
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 1
s Murina_feae.MurFea_scaffold_85699                           5750 36 +     14753 t-----------------c-------------------c----a---t-aatttatac-g-tca-ataagccc----tgg-ctg-taa--------a
i Murina_feae.MurFea_scaffold_85699                      C 0 I 1
s Mus_caroli.LT608237.1                                   84360664 46 - 120012414 A-----------------GCA-C-C-TCT-TCC-AC-AC----A---T-TGGTTAAAC-C-ATA-ATACATCC----TGA-C-T-T----------A
i Mus_caroli.LT608237.1                                  I 4 I 1
s Mus_musculus.chr8                                       87649664 46 - 129401213 A-----------------GCAGCTC---T-TCC-AC-AC----A---T-TGGTTAAAC-C-ATA-ATACATCC----TGA-G-T-T----------G
i Mus_musculus.chr8                                      I 4 I 1
s Mus_pahari.LT608297.1                                   31354320 46 -  89631738 A-----------------GCA-C-C-TCT-TCC-AC-AC----A---T-TGGTTACAC-C-ATA-ATACATCC----TAA-C-T-T----------A
i Mus_pahari.LT608297.1                                  I 4 I 1
s Mus_spretus.CM004101.1                                  90751725 46 - 130317789 A-----------------GCA-C-C-TCT-TCC-AC-AC----A---T-TGGTTAAAC-C-ATA-ATACATCC----TGA-C-T-T----------G
i Mus_spretus.CM004101.1                                 I 4 I 1
s Mustela_putorius.JH418006.1                               300450 34 -  14710649 a-----------------a-------------------c----a---c-aaattatac-c-tca-ataaaccc----tga-ctg-c----------a
i Mustela_putorius.JH418006.1                            C 0 I 1
s Myotis_brandtii.KE162005.1                                278922 36 -  10118263 t-----------------c-------------------c----a---t-aaattatat-g-tca-ataagccc----tgg-ctg-taa--------a
i Myotis_brandtii.KE162005.1                             C 0 I 2
s Myotis_davidii.KB100139.1                                1586616 36 -   6019432 t-----------------c-------------------c----a---t-aaattatat-g-tca-ataagccc----tgg-ctg-taa--------a
i Myotis_davidii.KB100139.1                              C 0 I 1
s Myotis_lucifugus.GL429869.1                              3902686 36 -   4330536 t-----------------c-------------------c----a---t-aaattatat-g-tca-ataagctc----tgg-ctg-taa--------a
i Myotis_lucifugus.GL429869.1                            C 0 I 3
s Myotis_myotis.MyoMyo_scaffold_28916                        33242 36 +     33610 t-----------------c-------------------c----a---t-aaattatat-g-tca-ataagccc----tgg-ctg-taa--------a
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 I 2
s Nannospalax_galili.KL204047.1                            2033159 41 -   3037898 A---------ATTCC-ATA-------------------C----a---t-taattatat-g-tta-ataaatcC----CAG-CTT-T----------A
i Nannospalax_galili.KL204047.1                          I 10 I 1
s Nasalis_larvatus.k141_413338                               13777 34 +     21681 T-----------------A-------------------T----G---T-AGATTATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306213 34 +  31847680 t-----------------a-------------------c----a---c-aaattatac-c-tca-ataaacca----tga-ctg-c----------a
i Neomonachus_schauinslandi.NINY01007730.1               I 54 I 1
s Nyctereutes_procyonoides.CAJHUB010000658.1               9148624 34 -   9404916 t-----------------a-------------------c----a---c-aaattatac-c-tca-atagaccc----tga-ctg-c----------a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 1
s Nycticebus_bengalensis.LG01                            102578815 34 - 196305487 T-----------------A-------------------C----A---T-AAATTATAC-C-TCA-ATCAACTC----AAA-CTT-T----------G
i Nycticebus_bengalensis.LG01                            C 0 I 1
s Nycticebus_coucang.k141_771082                               660 34 -      2667 T-----------------A-------------------C----A---T-AAATTATAC-C-TCA-ATCAACTC----AAA-CTT-T----------G
i Nycticebus_coucang.k141_771082                         C 0 I 1
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749236 34 + 199412804 T-----------------A-------------------C----A---T-AAATTATAC-C-TCA-ATCAACTC----AAA-CTT-T----------G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 1
s Ochotona_princeps.JH802162.1                             1362653 26 +   3988456 T-----------------A-------------------C----A---T-AAATTCTAC-C-TCA-CAAActct------------------------
i Ochotona_princeps.JH802162.1                           C 0 I 40
s Odobenus_rosmarus.KB229312.1                              505898 34 -   2017862 t-----------------a-------------------c----a---c-aaattatac-c-tca-ataaacca----tga-ttg-c----------a
i Odobenus_rosmarus.KB229312.1                           C 0 I 1
s Ondatra_zibethicus.OndZib_scaffold_46174                    3533 47 -     28053 A-----------------AAA-C-CTA-T-T-TCAT-AT----G---T-TGATTAGAC-C-TTA-ATAATTTC----TGA-CTT-T----------A
i Ondatra_zibethicus.OndZib_scaffold_46174               I 4 I 1
s Onychomys_torridus.OnyTor_scaffold_2986                    79450 47 +    102263 A-----------------AAA-C-CTA-T-TCC-AT-AC----A---T-TGGTTAGAC-C-TTA-ATAATATC----TGA-CTT-T----------A
i Onychomys_torridus.OnyTor_scaffold_2986                I 4 I 1
s Oryctolagus_cuniculus.CM000791.1                        67146362 27 + 174332312 T-----------------C-------------------G----A---T-AAATTACAC-C-TCAACAAACTCC------------------------
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 3
s Otocyon_megalotis.JAEUCK010005147.1                       461592 34 -    559221 t-----------------a-------------------c----a---c-aaattatac-c-tca-atagaccc----tga-ctg-c----------a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 1
s Otolemur_crassicaudatus.k141_222918                         3134 34 +      8798 C-----------------A-------------------C----A---T-AAATTATAC-C-TCA-ATCAACTC----TAA-CTT-T----------G
i Otolemur_crassicaudatus.k141_222918                    C 0 I 1
s Otolemur_garnettii.GL873799.1                             695298 34 -   1103335 c-----------------a-------------------c----a---t-aaattatac-c-tca-atcaACTC----TAA-CTT-T----------G
i Otolemur_garnettii.GL873799.1                          C 0 I 1
s Pan_paniscus.KQ411613.1                                    42712 34 +     80009 t-----------------a-------------------t----g---t-aaattatac-c-tta-atcaACCC----TGA-CTT-T----------A
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189141622 34 + 189151597 t-----------------a-------------------t----g---t-aaattatac-c-tta-atcaACCC----TGA-CTT-T----------A
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  150422 34 +    230217 t-----------------t-------------------c----a---g-aaatcatac-c-tca-ataaaccc----tga-ctg-t----------a
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 1
s Panthera_pardus.KV860321.1                                263627 34 +  18783137 t-----------------t-------------------c----a---g-aaatcatac-c-tca-ataaaccc----tga-ctg-t----------a
i Panthera_pardus.KV860321.1                             C 0 I 1
s Panthera_tigris.KE722367.1                               4720265 34 -   8748460 t-----------------t-------------------c----a---g-aaatcatac-c-tca-ataaaccc----tga-ctg-t----------a
i Panthera_tigris.KE722367.1                             C 0 I 1
s Papio_anubis.CM001495.2                                183441811 34 + 183742232 t-----------------a-------------------t----g---t-aaattatac-c-tca-atcaACCC----TGA-CTT-T----------A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             5505 34 +     20448 T-----------------A-------------------T----G---T-AAATTATAC-C-TCA-ATCAACCC----TGA-CTT-T----------A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20562313 34 +  20919399 T-----------------A-------------------T----G---T-AAATTATAC-C-TCA-ATCAACCC----TGA-CTT-T----------A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   4249 34 +     41871 T-----------------A-------------------T----G---T-AAATTATAC-C-TCA-ATCAACCC----TGA-CTT-T----------A
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     7534 34 +     27711 T-----------------A-------------------T----G---T-AAATTATAC-C-TCA-ATCAACCC----TGA-CTT-T----------A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  7612 34 +      9205 T-----------------A-------------------T----G---T-AAATTATAC-C-TCA-ATCAACCC----TGA-CTT-T----------A
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11885 34 -     78924 t-----------------a-------------------c----a---g-aaattatac-c-tca-atttaccc----tga-ctg-t----------a
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 1
s Perodicticus_ibeanus.k141_855320                            9283 34 +     13100 T-----------------A-------------------C----A---T-AAATTATAC-C-TCA-ATCAACGC----AAA-CTT-T----------G
i Perodicticus_ibeanus.k141_855320                       C 0 I 1
s Perodicticus_potto.k141_1092580                             7685 34 +     25941 T-----------------A-------------------C----A---T-AAATTATAC-C-TCA-ATCAACGC----AAA-CTT-T----------G
i Perodicticus_potto.k141_1092580                        C 0 I 1
s Peromyscus_maniculatus.KI615324.1                       18194071 47 -  18517816 A-----------------AAA-C-CTA-T-TCC-AT-AC----G---C-TGATTAGAC-C-TTA-ATAATTTC----TGA-CTT-T----------A
i Peromyscus_maniculatus.KI615324.1                      I 4 I 1
s Piliocolobus_badius.k141_1234363                           42273 34 +     62158 T-----------------A-------------------T----G---T-AAATTATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        37004 34 +     89929 T-----------------A-------------------T----G---T-AAATTATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            38420 34 +     51399 T-----------------A-------------------T----G---T-AAATTATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14294658 34 -  14605196 t-----------------a-------------------t----g---t-aaattatac-c-tta-atcAACCC----TGA-CTT-T----------A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1078 38 +     22620 t-----------------c-------------------c----a---t-aaattatat-g-tca-acaaGCCC----TGG-CTG-A------AAAAA
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 1
s Pongo_abelii.CM009266.2                                189129756 34 + 189387572 t-----------------a-------------------t----g---t-aaattatac-c-tta-atcAACCC----TGA-CTT-T----------A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9569364 34 +   9816681 T-----------------A-------------------T----G---T-AAATTATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               71945 34 -     81375 T-----------------A-------------------T----G---T-AAATTATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              3765 34 +     19060 T-----------------A-------------------T----G---T-AAATTATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2596108 34 -   4620579 t-----------------a-------------------t----g---t-aaattatac-c-tca-ataaaccc----tga-ttt-t----------g
i Prolemur_simus.MPIZ01000396.1                          C 0 I 1
s Propithecus_coquerelli.NW_012148875.1                     990078 34 +   2598838 T-----------------A-------------------c----a---c-aaattatac-c-tca-ataaaccc----tga-ctt-t----------g
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 1
s Propithecus_coronatus.k141_347390                          28388 34 +     38485 T-----------------A-------------------C----A---C-AAATTATAC-C-TCA-ATAAACCC----TGA-CTT-T----------G
i Propithecus_coronatus.k141_347390                      C 0 I 1
s Propithecus_diadema.k141_58108                               433 34 -     13098 T-----------------A-------------------C----A---C-AAATTATAC-C-TCA-ATAAACCC----TGA-CTT-T----------G
i Propithecus_diadema.k141_58108                         C 0 I 1
s Propithecus_edwardsi.k141_1176054                          25909 34 +     35766 T-----------------A-------------------C----A---C-AAATTATAC-C-TCA-ATAAACCC----TGA-CTT-T----------G
i Propithecus_edwardsi.k141_1176054                      C 0 I 1
s Propithecus_perrieri.k141_1200571                           4097 34 -     24134 T-----------------A-------------------C----A---C-AAATTATAC-C-TCA-ATAAACCC----TGA-CTT-T----------G
i Propithecus_perrieri.k141_1200571                      C 0 I 1
s Propithecus_tattersalli.k141_790011                        27919 34 -     67325 T-----------------A-------------------C----A---C-AAATTATAC-C-TCA-ATAAACCC----TGA-CTT-T----------G
i Propithecus_tattersalli.k141_790011                    C 0 I 1
s Propithecus_verreauxi.k141_956661                           4141 34 -      6182 T-----------------A-------------------C----A---C-AAATTATAC-C-TCA-ATAAACCC----TGA-CTT-T----------G
i Propithecus_verreauxi.k141_956661                      C 0 I 1
s Psammomys_obesus.NESX01036370.1                             9711 44 -     21651 A-----------------ACA-CAT-A-T-TCT-AT-AC----A---T-TGATGAGAC-T-TTA-ATAAATCT----TGA-C-C-------------
i Psammomys_obesus.NESX01036370.1                        I 4 C 0
s Pteronotus_parnellii.KE909381.1                            13938 33 -     21811 t-----------------a-------------------c----a---c-aaattatat-c-tca-ataagctC----TAA-A-C-T----------A
i Pteronotus_parnellii.KE909381.1                        C 0 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39472 34 +     42204 a-----------------a-------------------c----a---c-aaattatac-c-tca-ataaaccc----tga-ctg-c----------a
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 1
s Pteropus_alecto.KB030862.1                              22976020 34 +  28871421 t-----------------a-------------------c----t---t-aagttatag-c-tca-aaaagctc----taa-ctg-t----------a
i Pteropus_alecto.KB030862.1                             C 0 I 1
s Pteropus_vampyrus.KN525825.1                             1359106 34 +   4952924 t-----------------a-------------------c----a---t-aagttatag-c-tca-aaaagctc----taa-ctg-t----------a
i Pteropus_vampyrus.KN525825.1                           C 0 I 1
s Puma_concolor.QAVW01001104.1                            20273544 40 -  38429054 t-----------------t-------------------c----a---g-aaatcatac-c-tca-ataaaccc----tga-ctg-taaaaaa----a
i Puma_concolor.QAVW01001104.1                           C 0 I 1
s Pygathrix_cinerea.k141_1153803                             13776 34 -     91421 T-----------------A-------------------T----G---T-AGATTATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7607902 34 +   7812017 T-----------------A-------------------T----G---T-AGATTATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             13750 34 -     72585 T-----------------A-------------------T----G---T-AGATTATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53569937 47 +  90668790 A-----------------ACA-C-C---TCTCC-CTCAC----A---A-TGATTACAC-T-GTA-ATACATCC----TAA-C-TTT----------A
i Rattus_norvegicus.chr16                                I 4 I 1
s Rhinolophus_sinicus.LVEH01000134.1                        367568 14 -   3329780 t-----------------g-------------------c----a---t-aaattaaat---------------------------------------
i Rhinolophus_sinicus.LVEH01000134.1                     I 64 I 71
s Rhinopithecus_bieti.k119_217274                             5465 34 -     11128 T-----------------A-------------------T----A---T-AGATTATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91234825 34 - 195417433 T-----------------A-------------------T----A---T-AGATTATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7670470 34 +   7961872 T-----------------A-------------------T----A---T-AGATTATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87038 34 -     96226 t-----------------a-------------------c----a---a-aagttatat-c-tca-aaaagccc----taa-cta-t----------a
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 1
s Saguinus_bicolor.k141_2619299                               6933 32 -      8359 --------------------------------------T----C---T-AAATCACA--CCTTA-ATCAACCC----TGA-CTT-T----------A
i Saguinus_bicolor.k141_2619299                          I 1 C 0
s Saguinus_imperator.k141_2524406                              874 32 +      2197 --------------------------------------T----C---T-AAATCATA-CC-TTA-ATCAACCC----TGA-CTT-C----------A
i Saguinus_imperator.k141_2524406                        I 1 C 0
s Saguinus_inustus.k141_699149                               12296 32 +     13640 --------------------------------------T----C---T-AAATCACA-CC-TTA-ATCAACCC----TGA-CTT-C----------A
i Saguinus_inustus.k141_699149                           I 1 C 0
s Saguinus_labiatus.k141_285685                               7160 32 +      8564 --------------------------------------T----C---T-AAATCATA-CC-TTA-ATCAACCC----TGA-CTT-T----------A
i Saguinus_labiatus.k141_285685                          I 1 C 0
s Saguinus_midas.LG03                                    209468008 32 + 209938924 --------------------------------------T----C---T-AAATCACA--CCTTA-ATCAACCC----TGA-CTT-T----------A
i Saguinus_midas.LG03                                    I 1 C 0
s Saguinus_mystax.k141_374627                                 6722 32 -      9399 --------------------------------------T----C---T-AAATCACA-CC-TTA-ATCAACCC----TGA-CTT-C----------A
i Saguinus_mystax.k141_374627                            I 1 C 0
s Saimiri_boliviensis.NW_024100920.1                     119949985 34 - 121099817 C-----------------A-------------------T----G---T-AAATCATAC-C-TTA-ATCAACCT----TGA-CTT-T----------A
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       22441 34 +     46362 C-----------------A-------------------T----G---T-AAATCATAC-C-TTA-ATCAACCT----TGA-CTT-T----------a
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               22536 34 +     45824 C-----------------A-------------------T----G---T-AAATCATAC-C-TTA-ATCAACCT----TGA-CTT-T----------a
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             39164 34 -     64574 A-----------------A-------------------T----G---T-AAATCATAC-C-TTA-ATCaaccc----tga-ctt-t----------a
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               2170 34 -     23631 C-----------------A-------------------T----G---T-AAATCATAC-C-TTA-ATCAACCT----TGA-CTT-T----------a
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 22429 34 -     61129 C-----------------A-------------------T----G---T-AAATCATAC-C-TTA-ATCAACCT----TGA-CTT-T----------a
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5419379 34 -   5703754 T-----------------A-------------------T----A---T-AAATCGTAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          54420 34 -     80660 T-----------------A-------------------T----A---T-AAATCGTAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Semnopithecus_entellus.k141_11662                          18282 34 -     19888 T-----------------A-------------------T----G---T-AAATTATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      25485 34 +     39453 T-----------------A-------------------T----G---T-AAATTATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            6004 34 +     27826 T-----------------A-------------------T----G---T-AAATTATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             5524 34 -     19483 T-----------------A-------------------T----G---T-AAATTATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      5593 34 +      7198 T-----------------A-------------------T----G---T-AAATTATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         13851 34 +     15514 T-----------------A-------------------T----G---T-AAATTATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               3004 32 +   1910179 t-----------------g-------------------c----a---t-aaattatac-t-tca-CTGATCTG----TGA-CTG-------------
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 2
s Sorex_araneus.JH798187.1                                13649914 29 -  18376816 t-----------------a-------------------c----a---t-aaattatacct-TCA-GAAATCCT----GA------------------
i Sorex_araneus.JH798187.1                               C 0 I 3
s Spermophilus_dauricus.KZ294078.1                         1952405 51 -   3870691 caaaagcccatcaCCCATA-------------------C----A---T-AAATTATTG-T-TTA-ATAAACCC----TAA-CTG-T----------A
i Spermophilus_dauricus.KZ294078.1                       I 4 I 2
s Spilogale_gracilis.SpiGra_flattened_line_13525             29973 34 +     97271 t-----------------a-------------------c----a---c-aaattatac-c-tca-ataaaccc----tga-ctg-c----------a
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 1
s Suricata_suricatta.SurSur_flattened_line_6629              17559 32 -    196729 t-----------------a-------------------c----a---g-aaattaaac-t-tca-ataaac------tga-ctg-t----------a
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 1
s Sus_scrofa.CM000828.4                                    6809742 34 +  69701581 t-----------------g-------------------c----a---g-aagttacat-c-tca-ataaaCCC----TAA-CAG-T----------A
i Sus_scrofa.CM000828.4                                  C 0 I 1
s Symphalangus_syndactylus.tarseq_199                      1092068 34 -   1523678 T-----------------A-------------------T----G---T-AAATTATAC-C-TTA-ATCAACCC----TGA-CAT-T----------A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 9851 31 +     41958 t-----------------c-------------------c----a---t-aaattatat-c-tca-gtaaGCCC----TAA-CT--------------
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 2
s Tapirus_indicus.TapInd_scaffold_9301                      118007 34 -    156842 t-----------------a-------------------c----a---t-aaattatat-c-tca-ataaaccc----tga-ttg-t----------a
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 1
s Tapirus_terrestris.TapTer_scaffold_755                    386460 34 +    539355 t-----------------a-------------------c----a---t-aagttatat-c-tca-ataaaccc----tga-ttg-t----------a
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 1
s Tarsius_lariang.k141_2201908                               25688 34 +     70052 T-----------------G-------------------C----A---T-AAATTTTAC-C-TCA-ATAAATCC----TGA-CTT-T----------C
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                 523 34 -     16117 T-----------------G-------------------C----A---T-AAATTTTAC-C-TCA-ATAAATCC----TGA-CTT-T----------C
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186427177 34 + 186847797 t-----------------a-------------------t----g---t-aaattatac-c-tca-atcaACCC----TGA-CTT-T----------A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     80179 34 +    610378 t-----------------a-------------------c----a---t-gaattatat-c-tca-ataaGCCC----TAA-CTA-A----------A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 1
s Trachypithecus_auratus.k141_722599                          9576 34 -     20410 T-----------------A-------------------T----G---T-AAATTATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    13772 34 +     15221 T-----------------A-------------------T----G---T-AAATTATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        9677 34 +     19930 T-----------------A-------------------T----G---T-AAATTATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       6104 34 -     19997 T-----------------A-------------------T----G---T-AAATTATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            46233 34 -     60166 T-----------------A-------------------T----G---T-AAATTATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        13699 34 -     27529 T-----------------A-------------------T----G---T-AAATTATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     13643 34 -     18194 T-----------------A-------------------T----G---T-AAATTATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           7371 34 -     21137 T-----------------A-------------------T----G---T-AAATTATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    6074 34 -     10723 T-----------------A-------------------T----G---T-AAATTATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         5230 34 +      9834 T-----------------A-------------------T----G---T-AAATTATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        23543 34 +     32220 T-----------------A-------------------T----G---T-AAATTATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5937645 34 +   6242583 T-----------------A-------------------T----G---T-AAATTATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        6898 34 +     20839 T-----------------A-------------------T----G---T-AAATTATAC-C-TTA-ATCAACCC----TGA-CTT-T----------A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2154929 34 +   4065304 G-----------------G-------------------C----A---T-aagttatac-c-tca-ataaaccc----tga-ctt-c----------a
i Tupaia_chinensis.KB320699.1                            C 0 I 1
s Tupaia_tana.TupTan_flattened_line_97126                     8577 34 -     10553 G-----------------G-------------------C----A---T-AAATTATAC-C-TCG-ATAAACCC----TGA-CTT-C----------A
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 1
s Ursus_maritimus.KK499267.1                               4849668 34 -   5085361 t-----------------a-------------------c----a---c-aaattatac-t-gca-ataaactg----tga-ttg-c----------a
i Ursus_maritimus.KK499267.1                             C 0 I 1
s Varecia_rubra.k141_590885                                  10763 34 +     50397 T-----------------A-------------------C----A---T-AAATTATAC-C-TCA-ATAAACCC----TGA-CTT-T----------G
i Varecia_rubra.k141_590885                              C 0 I 1
s Varecia_variegata.k141_1128296                             10818 34 +     24756 T-----------------A-------------------C----A---T-AAATTATAC-C-TCA-ATAAACCC----TGA-CTT-T----------G
i Varecia_variegata.k141_1128296                         C 0 I 1
s Vicugna_pacos.KN270157.1                                 5371121 34 -   5488506 c-----------------a-------------------c----a---t-cagttacat-c-tca-ataaactc----taa-ctg-t----------a
i Vicugna_pacos.KN270157.1                               C 0 I 1
s Vulpes_lagopus.VulLag_flattened_line_30954                 10038 34 -     43706 t-----------------a-------------------c----a---c-aaattatac-c-tca-atagaccc----tga-ctg-c----------a
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 1
s Xerus_inauris.XerIna_scaffold_48378                        23388 50 -     24430 cagaaacccacca-ccaca-------------------c----g---c-aaattatcc-t-tta-ataaaccc----tga-ctt-t----------a
i Xerus_inauris.XerIna_scaffold_48378                    I 4 I 1
s Zalophus_californianus.ZalCal_flattened_line_17732          4406 34 +     86975 t-----------------a-------------------c----a---c-aaattatac-c-tca-ataaactg----tga-ttg-c----------a
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 1
s Zapus_hudsonius.ZapHud_scaffold_11398                      14249 42 +     63895 A-----------------A-------------------TCTCCATAGATAAATGATAC-C-ATA-AGAAATCC----TGA-CCA-A----------A
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 12 I 1
e Echinops_telfairi.JH980293.1                            48779651 164 + 111700974 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   52652  8 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   3761  0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 71325 110 +    116680 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11304  0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152480  8 -    313613 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Procavia_capensis.ProCapCap_scaffold_85530                 11991 249 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orycteropus_afer.OryAfe_flattened_line_144387               9003 16 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187970 110 +    196477 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    20898 16 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50341  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352  0 +    737560 C
e Loxodonta_africana.GL010049.1                            4216156 234 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_384612                 297 328 -       958 I
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  8618  0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20195104  0 + 205367284 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Elephantulus_edwardii.JH947257.1                         1089466 1162 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            62473  5 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Condylura_cristata.JH655891.1                           17547413  8 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            172152 108 +    839153 I
e Choloepus_didactylus.ChoDid_scaffold_45914                 17052 108 +     19366 I
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_713168             206  0 -      2554 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    136758  0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       5398 14 +     62944 A----------A-------------------------AT-GT----TACAATTC
s Acinonyx_jubatus.LLWD01001279.1                           826578 42 -   1699592 aaaaa------aaaaaaaaaaaaaaaaaaaaaaaaaaa--ac----agccatcT
i Acinonyx_jubatus.LLWD01001279.1                        I 1 C 0
s Acomys_cahirinus.AcoCah_scaffold_11939                     24671 14 -     89785 a----------a-------------------------a-gtcatagtaca----
i Acomys_cahirinus.AcoCah_scaffold_11939                 n 92 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9509841 23 -  29979442 aaaaaaaaaaaa-------------------------a--at----cacagtct
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 1 C 0
s Ailurus_fulgens.LNAC01001112.1                             78622 13 -    347723 a----------a-------------------------a--aT----TGCAATCT
i Ailurus_fulgens.LNAC01001112.1                         I 1 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     74012 13 -     89534 A----------T-------------------------A--TTGTAATACA----
i Allactaga_bullata.AllBul_scaffold_9566                 I 1 C 0
s Allenopithecus_nigroviridis.k141_3361533                   13318 14 -     52922 A----------A-------------------------AT-GT----TACAATTC
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         13259 14 -     28001 A----------A-------------------------AT-GT----TACCATTC
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          3705 14 -     18505 A----------A-------------------------AT-GT----TACCATTC
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           4554 14 -     12518 A----------A-------------------------AT-GT----TACCATTC
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                              2115 14 -     27731 A----------G-------------------------AT-AT----TACAGTTC
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                2243 14 +      3134 A----------G-------------------------AT-AT----TACAGTTC
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               2375 14 -     45847 A----------G-------------------------AT-AT----TACAGTTC
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                23580 14 +     25266 A----------G-------------------------AT-AT----TACAGTTC
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           2765 14 +      2906 A----------G-------------------------AT-AT----TACAGTTC
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            16878 14 -     18578 A----------G-------------------------AT-AT----TACAGTTC
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              2267 14 +     47717 A----------G-------------------------AT-AT----TACAGTTC
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             2394 14 -      3544 A----------G-------------------------AT-AT----TACAGTTC
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             13615 14 +     50774 A----------G-------------------------AT-AT----TACAGTTC
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184352 13 +    412891 A----------A-------------------------A--AT----GATAATGT
i Anoura_caudifer.AnoCau_scaffold_1412                   I 1 C 0
s Aotus_azarae.k141_3104676                                  14240 14 -     33861 A----------G-------------------------AT-AT----TACAATTC
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            14260 14 -     34016 A----------G-------------------------AT-AT----TATAATTC
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4296657 14 -   5030052 A----------G-------------------------AT-AT----TATAATTC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             14262 14 -     34685 A----------G-------------------------AT-AT----TATAATTC
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               27386 14 -     47192 A----------G-------------------------AT-AT----TATAATTT
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      11190  4 +     20879 A----------A-------------------------A--A-------------
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 1 I 23
s Arctocebus_calabarensis.k141_2318572                       10689 10 +     14667 A----------A-------------------------AT-AT----TACA----
i Arctocebus_calabarensis.k141_2318572                   I 1 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3764 13 +     43469 a----------a-------------------------a--aC----TATAATGT
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 1 C 0
s Avahi_laniger.k141_765380                                  53072 14 -     92717 A----------A-------------------------AA-AT----AACAATAC
i Avahi_laniger.k141_765380                              I 1 C 0
s Avahi_peyrierasi.k141_1424874                              53701 14 +     85213 A----------A-------------------------AA-AT----AACAATAC
i Avahi_peyrierasi.k141_1424874                          I 1 C 0
s Callibella_humilis.k141_1278103                             4000 14 -     10423 A----------G-------------------------AT-AC----TACAATTC
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             23485 14 +     31915 A----------G-------------------------AT-AT----TACAATTC
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            3966 14 +      5267 A----------G-------------------------AT-AC----TACAATTC
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23589180 14 - 189096842 A----------G-------------------------AT-AC----TACAATTC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             10710 14 -     12001 A----------G-------------------------AT-AC----TACAATTC
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10001670 13 -  17673402 a----------a-------------------------a--aT----TATGATAT
i Camelus_bactrianus.KN276810.1                          I 1 C 0
s Camelus_dromedarius.KN272107.1                           2334128 13 -   7040546 a----------a-------------------------a--aT----TATGATAT
i Camelus_dromedarius.KN272107.1                         I 1 C 0
s Camelus_ferus.KB017975.1                                  402411 13 -   1652518 a----------a-------------------------a--aT----TATGATAT
i Camelus_ferus.KB017975.1                               I 1 C 0
s CanFam4.chr16                                           17798457 13 -  60362399 a----------a-------------------------a--aT----TGCAATCT
i CanFam4.chr16                                          I 1 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184514 13 -    185531 a----------a-------------------------a--aT----TGCAATCT
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 1 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9033900 13 -   9314153 a----------a-------------------------a--aT----TGCAATCT
i Canis_lupus_dingo.QKWQ01000480.1                       I 1 C 0
s Canis_lupus_familiaris.chr16                            17958165 13 -  59632846 a----------a-------------------------a--aT----TGCAATCT
i Canis_lupus_familiaris.chr16                           I 1 C 0
s Canis_lupus_orion.HG994398.1                            18499677 13 +  63665305 a----------a-------------------------a--aT----TGCAATCT
i Canis_lupus_orion.HG994398.1                           I 1 C 0
s Carlito_syrichta.NW_007247396.1                           200714  8 +    308752 A----------A-------------------------A--AT----TA-----C
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                4127 13 -     11696 a----------a-------------------------a--aT----TATAATGT
i Carollia_perspicillata.CarPer_scaffold_92756           I 1 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     92288 13 +    217609 A----------A-------------------------A--AT----TACAATCT
i Catagonus_wagneri.CatWag_scaffold_2839                 I 1 C 0
s Cebuella_niveiventris.k141_1251222                          8625 14 -     11392 A----------G-------------------------AT-AC----TACAATTC
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               4723 14 -      7577 A----------G-------------------------AT-AC----TACAATTC
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25650749 14 +  26074798 A----------G-------------------------AT-AT----TACAATTC
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_398305                                  326 14 +      1777 A----------G-------------------------AT-AT----TACAATTC
i Cebus_olivaceus.k141_398305                            C 0 C 0
s Cebus_unicolor.k141_544048                                 48657 14 -     74725 A----------G-------------------------AT-AT----TACAATTC
i Cebus_unicolor.k141_544048                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         4729  8 +     31688 A----------A-------------------------A--AT----TA-----C
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12230718 13 +  27778364 a----------a-------------------------a--at----tacaacAT
i Ceratotherium_simum.JH767749.1                         I 1 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1745 13 -     25243 a----------a-------------------------a--aT----TACAACAT
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 1 C 0
s Cercocebus_atys.KQ010504.1                               4474271 14 +   4669795 A----------A-------------------------AT-GT----TACAATTC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        12820 14 -     19203 A----------A-------------------------AT-GT----TACAATTC
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           7242 14 +      8260 A----------A-------------------------AT-GT----TACAATTC
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           7468 14 +     27781 A----------A-------------------------AT-GT----TACAATTC
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         7628 14 -     20310 A----------A-------------------------AT-GT----TACAATTC
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          10607 14 +     29689 A----------A-------------------------AT-GT----TACAATTC
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            5038 14 +      9989 A----------A-------------------------AT-GT----TACCATTC
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          13286 14 -     27936 A----------A-------------------------AT-GT----TACAATTC
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            2152 14 -     17152 A----------A-------------------------AT-GT----TACAATTC
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38815690 14 +  39242232 A----------A-------------------------AT-GT----TACAATTC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21221381 14 -  21565898 A----------A-------------------------AT-GT----TACAATTC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       38499 14 -     53127 A----------A-------------------------AT-GT----TACAATTC
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        5770 14 +      7159 A----------A-------------------------AT-GT----TACAATTC
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       13302 14 -     27947 A----------A-------------------------AT-GT----TACAATTC
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         13275 14 +     17596 A----------A-------------------------AT-GT----TACAATTC
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          2509 14 +     26000 A----------A-------------------------AT-GT----TACCATTC
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             20459 14 -     52598 A----------A-------------------------AA-CT----TACAATAC
i Cheirogaleus_major.k141_333249                         I 1 C 0
s Cheirogaleus_medius.k141_1055463                           15826 14 +     57038 A----------A-------------------------AA-CT----TACAATAC
i Cheirogaleus_medius.k141_1055463                       I 1 C 0
s Chiropotes_albinasus.k141_2813271                           9902 14 +     11226 A----------G-------------------------AT-AT----TACAATTC
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18427259 14 -  18827391 A----------A-------------------------AT-GT----TACCATTC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       13696 14 -     50209 A----------A-------------------------AT-GT----TACCATTC
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135420696 14 + 135778131 A----------A-------------------------AT-GT----TACCATTC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1909209 14 +   2368649 A----------A-------------------------AT-GT----TACAATTC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199948887 14 + 200372422 A----------A-------------------------AT-GT----TACAATTC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              35747 14 +     84244 A----------A-------------------------AT-GT----TACAATTC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1135 11 +     23735 a----------a-------------------------a--at----aataat--
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      I 563 I 21
s Cricetomys_gambianus.CriGam_scaffold_18520                 49430 14 +     63868 A----------A-------------------------A-GTCATAACACA----
i Cricetomys_gambianus.CriGam_scaffold_18520             I 1 C 0
s Cricetulus_griseus.LT883664.1                           11666908 14 + 224834208 A----------A-------------------------A-ACCATAATACA----
i Cricetulus_griseus.LT883664.1                          I 1 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               1886 14 -     19598 C---------TA-------------------------A--AA----TATAATAT
i Crocidura_indochinensis.CroInd_scaffold_37019          I 3 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27756 13 -     87169 a----------a-------------------------a--aT----TTCAATCT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 1 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    836491  9 +   1526836 A----------A-------------------------A--TC----TACA----
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 1 C 0
s Daubentonia_madagascariensis.ctg71                      12536689 14 -  12879189 A----------A-------------------------AA-AT----TACAATAC
i Daubentonia_madagascariensis.ctg71                     I 1 C 0
s Desmodus_rotundus.KZ672289.1                             8629143 13 +  20541912 a----------a-------------------------a--at----tataatgt
i Desmodus_rotundus.KZ672289.1                           I 1 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672568 13 +   1390856 a----------a-------------------------a--at----tacaacAT
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 1 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    5321 13 +    198055 a----------a-------------------------a--aT----TACAACAT
i Diceros_bicornis.DicBicMic_scaffold_5955               I 1 C 0
s Eidolon_helvum.KE759718.1                                   9799 13 +     11740 A----------A-------------------------A--AT----TACAATAT
i Eidolon_helvum.KE759718.1                              I 1 C 0
s Ellobius_lutescens.LOEQ01008920.1                          90401 14 +    110024 a----------a-------------------------a-gtaataattga----
i Ellobius_lutescens.LOEQ01008920.1                      I 1 C 0
s Ellobius_talpinus.LOJH01109367.1                             583 14 +      6299 A----------A-------------------------A-GTCATAATTGA----
i Ellobius_talpinus.LOJH01109367.1                       I 1 C 0
s Enhydra_lutris.KZ291758.1                               16328591 12 -  41312741 -----------a-------------------------a--aT----CACAATCT
i Enhydra_lutris.KZ291758.1                              I 1 C 0
s Eptesicus_fuscus.JH977646.1                              2144723 13 -  14770903 a----------a-------------------------a--at----cacaatat
i Eptesicus_fuscus.JH977646.1                            I 1 C 0
s Equus_asinus.JREZ01000139.1                              1282631 13 +   4378816 a----------a-------------------------a--aC----TACAATAT
i Equus_asinus.JREZ01000139.1                            I 1 C 0
s Equus_caballus.CM000403.2                               18530452 13 -  39960074 a----------a-------------------------a--aC----TACAATAT
i Equus_caballus.CM000403.2                              I 1 C 0
s Equus_przewalskii.KK951119.1                               32467 13 +    498745 a----------a-------------------------a--aC----TACAATAT
i Equus_przewalskii.KK951119.1                           I 1 C 0
s Erythrocebus_patas.Contig38                             21203867 14 -  21539334 A----------A-------------------------AT-GT----TACCATTC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13177 14 -     14127 A----------A-------------------------AA-AT----TACAATAC
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                5876 14 -     16928 A----------A-------------------------AA-AT----TACAACAT
i Eulemur_collaris.k141_377015                           I 1 C 0
s Eulemur_coronatus.k141_885031                              14904 14 -     25546 A----------A-------------------------AA-AT----TACAAGAC
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12104 14 +     26330 A----------A-------------------------AA-AT----TACAACAC
i Eulemur_flavifrons.k141_1184614                        I 2 C 0
s Eulemur_fulvus.k141_544389                                 13343 14 +     23973 A----------A-------------------------AA-AT----TACAACAT
i Eulemur_fulvus.k141_544389                             I 1 C 0
s Eulemur_macaco.k141_1562045                                12104 14 +     75513 A----------A-------------------------AA-AT----TACAACAC
i Eulemur_macaco.k141_1562045                            I 2 C 0
s Eulemur_mongoz.k141_232305                                 10040 14 +     97555 A----------A-------------------------AA-AT----TACAACAC
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            12960 14 +     26496 A----------A-------------------------AA-AT----TACAACAC
i Eulemur_rubriventer.k141_571033                        I 1 C 0
s Eulemur_rufus.k141_1476633                                  3578 14 -     17153 A----------A-------------------------AA-AT----TACAACAT
i Eulemur_rufus.k141_1476633                             I 1 C 0
s Eulemur_sanfordi.k141_1122526                              13153 14 +    111500 A----------A-------------------------AA-AT----TACAACAC
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20236261 10 + 206538554 ----------------------------------------ac----AGCCATCT
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195104 10 + 205367284 ----------------------------------------ac----AGCCATCT
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  8618 10 -     36744 ----------------------------------------AC----AGCCATCT
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     425637 10 -    453645 A----------C-------------------------AT-AT----TATG----
i Galago_moholi.ctg2040                                  I 1 C 0
s Galago_senegalensis.k141_631886                             3344 10 +     11339 A----------C-------------------------AT-AT----TATG----
i Galago_senegalensis.k141_631886                        I 1 C 0
s Galagoides_demidoff.k141_1711393                             647 10 +     41679 A----------A-------------------------AT-AT----TACG----
i Galagoides_demidoff.k141_1711393                       I 1 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840                460 13 -      9135 A----------A-------------------------A--AT----TACAATAC
i Galeopterus_variegatus.GalVar_scaffold_108840          I 1 C 0
s Gorilla_beringei.k141_3596273                              14652 14 -     32273 A----------A-------------------------AT-GT----TACAATTC
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186336799 14 + 186649187 A----------A-------------------------AT-GT----TACAATTC
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6233 14 -     19426 A----------A-------------------------AA-AT----GACAACAC
i Hapalemur_alaotrensis.k141_170648                      I 1 C 0
s Hapalemur_gilberti.k141_488810                             11382 14 -     15286 A----------A-------------------------AA-AT----GACAACAC
i Hapalemur_gilberti.k141_488810                         I 1 C 0
s Hapalemur_griseus.k141_1511508                             13021 14 +     18253 A----------A-------------------------AA-AT----GACAACAC
i Hapalemur_griseus.k141_1511508                         I 1 C 0
s Hapalemur_meridionalis.k141_248335                         13122 14 -     41752 a----------a-------------------------aa-AT----GACAACAC
i Hapalemur_meridionalis.k141_248335                     I 1 C 0
s Hapalemur_occidentalis.k141_907772                         12960 14 -     16460 A----------A-------------------------AA-AT----GACAACAC
i Hapalemur_occidentalis.k141_907772                     I 1 C 0
s Helogale_parvula.HelPar_flattened_line_2585               241591 13 +    327341 a----------a-------------------------a--aT----TTCAATCT
i Helogale_parvula.HelPar_flattened_line_2585            I 1 C 0
s Hipposideros_armiger.JXIK01000431.1                       111167  6 +   1711038 a----------a-------------------------a--a---------at--
i Hipposideros_armiger.JXIK01000431.1                    I 71 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               42598  6 +     43066 a----------a-------------------------a--a---------TT--
i Hipposideros_galeritus.HipGal_scaffold_29171           I 71 C 0
s Hoolock_leuconedys.ctg274                                    433467 14 +    630532 A----------A-------------------------AT-GT----TACAATTC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  43750 14 +     55795 aa---------a-------------------------a--AT----TTCAATCT
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 1 C 0
s Hylobates_agilis.k141_232023                                1233 14 -     12752 A----------A-------------------------AT-GT----TACAATTC
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                               1277 14 +     14092 A----------A-------------------------AT-GT----TACAATTC
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189542060 14 - 191637585 A----------A-------------------------AT-GT----TACAATTC
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3334954 14 -  11177569 A----------A-------------------------AT-GT----TACAATTC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7519260  2 -   7955117 -----------A-------------------------A----------------
i Ictidomys_tridecemlineatus.JH393364.1                  I 1 C 0
s Indri_indri.k141_3655594                                   21925 10 +     31101 A----------A-------------------------AA-AT----TACA----
i Indri_indri.k141_3655594                               I 1 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    13132 13 -     42476 A----------A-------------------------A--AT----CACAATAT
i Lasiurus_borealis.LasBor_scaffold_32767                I 1 C 0
s Lemur_catta.scaffold_24                                 15523465 14 -  30322482 A----------A-------------------------AA-AT----GACAACAC
i Lemur_catta.scaffold_24                                I 1 C 0
s Leontocebus_fuscicollis.k141_1820339                        6256 14 +     64341 A----------G-------------------------AT-AT----TACAATTC
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           3583 14 +      4941 A----------G-------------------------AT-AT----TACAATTC
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        6299 14 +     35603 A----------G-------------------------AT-AT----TACAATTC
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    27776 14 +     38576 A----------G-------------------------AC-AT----TACAATTC
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         24473 14 +     66356 A----------G-------------------------AC-AT----TACAATTC
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         10349 14 -     23766 A----------A-------------------------GA-AT----TATAATAC
i Lepilemur_ankaranensis.k141_596936                     I 1 C 0
s Lepilemur_dorsalis.k141_577674                             28415 14 +     45836 A----------A-------------------------GA-AT----TATAATAC
i Lepilemur_dorsalis.k141_577674                         I 1 C 0
s Lepilemur_ruficaudatus.k141_121139                           960 14 +     25010 A----------A-------------------------AA-GT----TACAATAC
i Lepilemur_ruficaudatus.k141_121139                     I 1 C 0
s Lepilemur_septentrionalis.k141_185316                      26351 14 +     54090 A----------A-------------------------GA-AT----TATAATAC
i Lepilemur_septentrionalis.k141_185316                  I 1 C 0
s Leptonychotes_weddellii.KB714746.1                       3042127 14 +   3914936 aa---------a-------------------------a--AT----TGCAATCT
i Leptonychotes_weddellii.KB714746.1                     I 1 C 0
s Lepus_americanus.LepAme_scaffold_107385                     5563  1 -     14121 A-----------------------------------------------------
i Lepus_americanus.LepAme_scaffold_107385                I 3 C 0
s Lophocebus_aterrimus.ctg367                              1435818 14 +   1826925 A----------A-------------------------AT-GT----TACCATTC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5023 10 +     11245 A----------A-------------------------AT-AT----TACA----
i Loris_lydekkerianus.k141_2539221                       I 1 C 0
s Loris_tardigradus.ctg83                                  1003873 10 +   6120653 A----------A-------------------------AT-AT----TACA----
i Loris_tardigradus.ctg83                                I 1 C 0
s Lycaon_pictus.CM007581.1                                17954405 13 -  59628241 a----------a-------------------------a--aT----TGCAATCT
i Lycaon_pictus.CM007581.1                               I 1 C 0
s Macaca_arctoides.k141_2326796                               5633 13 +     40492 A----------A-------------------------AT-GT----TACCAT-C
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59674895 14 +  60120075 A----------A-------------------------GT-GT----TACCATTC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 11410 14 -     26193 A----------A-------------------------AT-GT----TACCATTC
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            79193 14 -    114318 A----------A-------------------------AT-GT----TACCATTC
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  4890 14 -     23192 A----------A-------------------------AT-GT----TACCATTC
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                14352 14 -     29190 A----------A-------------------------AT-GT----TACCATTC
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  22917 14 +     37952 A----------A-------------------------AT-GT----TACCATTC
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186838008 14 + 187317192 A----------A-------------------------AT-GT----TACCATTC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25456569 14 -  25927173 A----------A-------------------------AT-GT----TACCATTC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  78768 14 +     89720 A----------A-------------------------AT-GT----TACCATTC
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 5766 14 +     20474 A----------A-------------------------AT-GT----TACCATTC
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   5566 14 -     14993 A----------A-------------------------AT-GT----TACCATTC
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  328437 14 -    668171 A----------A-------------------------AT-GT----TACCATTC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 3878 14 -     24072 A----------A-------------------------AT-GT----TACCATTC
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               24505 14 -     45290 A----------A-------------------------AT-GT----TACCATTC
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 89884 13 +     94391 a----------a-------------------------a--aT----TACAATAT
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 1 C 0
s Mandrillus_leucophaeus.scaffold280                      23936091 14 -  24302211 A----------A-------------------------AT-GT----TACAATTC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               350221 14 +    752769 C----------A-------------------------AT-GT----TACCATTC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33101569  3 -  40650429 A----------A-------------------------A----------------
i Marmota_marmota.CZRN01000018.1                         I 1 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         9608 13 -    207569 A----------A-------------------------A--CT----TATACTAT
i Megaderma_lyra.MegLyr_scaffold_4542                    I 13 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              9307 13 +     13704 a----------a-------------------------a--aT----TACAATCT
i Mellivora_capensis.MelCap_flattened_line_69365         I 1 C 0
s Mesocricetus_auratus.KB708134.1                         12181590 14 -  29670104 A----------A-------------------------A-GTCATAATGCA----
i Mesocricetus_auratus.KB708134.1                        I 1 C 0
s Mico_argentatus.k141_1239457                                4540 14 -      7380 A----------G-------------------------AT-AC----TACAATTC
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               3613 14 +     18990 A----------G-------------------------AT-AC----TACAATTC
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      4552 14 -      7356 A----------G-------------------------AT-AC----TACAATTC
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18290865 14 -  93316391 A----------A-------------------------AA-CT----TACAATAC
i Microcebus_murinus.CM007674.1                          I 1 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                14684 13 -     19307 a----------a-------------------------a--aT----TATAATGT
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 1 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849915 13 +   8254450 A----------A-------------------------A--AT----TACAATAT
i Miniopterus_natalensis.LDJU01000034.1                  I 2 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             33592 13 +     64694 A----------A-------------------------A--AT----TACAATAT
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 2 C 0
s Miopithecus_ogouensis.k141_534055                           7816 14 -     28506 A----------A-------------------------AT-GT----TACAATTC
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         4995 14 -      8324 aa---------a-------------------------a--AT----TGCAATCT
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 1 C 0
s Mirza_zaza.k141_952172                                      8416  9 -     37649 A----------A-------------------------AA-CT---------TAC
i Mirza_zaza.k141_952172                                 I 1 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140630 13 -    366855 a----------a-------------------------a--aT----TGCAATGT
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 1 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   34703 13 +     37127 a----------a-------------------------a--aT----TTCAATAT
i Mungos_mungo.MunMun_flattened_line_23663               I 1 C 0
s Murina_feae.MurFea_scaffold_85699                           5787 13 +     14753 a----------a-------------------------A--AT----CATAATAT
i Murina_feae.MurFea_scaffold_85699                      I 1 C 0
s Mus_caroli.LT608237.1                                   84360711 14 - 120012414 A----------A-------------------------A-GTCATAATACA----
i Mus_caroli.LT608237.1                                  I 1 C 0
s Mus_musculus.chr8                                       87649711 14 - 129401213 A----------A-------------------------A-GTCATAATACA----
i Mus_musculus.chr8                                      I 1 C 0
s Mus_pahari.LT608297.1                                   31354367 14 -  89631738 A----------A-------------------------A-GTCATAATACA----
i Mus_pahari.LT608297.1                                  I 1 C 0
s Mus_spretus.CM004101.1                                  90751772 14 - 130317789 A----------A-------------------------A-GTCATAATACA----
i Mus_spretus.CM004101.1                                 I 1 C 0
s Mustela_putorius.JH418006.1                               300485 13 -  14710649 g----------a-------------------------a--aT----TACAATCT
i Mustela_putorius.JH418006.1                            I 1 C 0
s Myotis_brandtii.KE162005.1                                278960 13 -  10118263 a----------A-------------------------T--AT----CACAATAT
i Myotis_brandtii.KE162005.1                             I 2 C 0
s Myotis_davidii.KB100139.1                                1586653 13 -   6019432 a----------a-------------------------a--at----cacaatat
i Myotis_davidii.KB100139.1                              I 1 C 0
s Myotis_lucifugus.GL429869.1                              3902725 13 -   4330536 a----------a-------------------------a--at----cacaatat
i Myotis_lucifugus.GL429869.1                            I 3 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        33280 13 +     33610 a----------A-------------------------A--AT----CACAATAT
i Myotis_myotis.MyoMyo_scaffold_28916                    I 2 C 0
s Nannospalax_galili.KL204047.1                            2033201  5 -   3037898 A----------G-------------------------A--TC------------
i Nannospalax_galili.KL204047.1                          I 1 I 4
s Nasalis_larvatus.k141_413338                               13811 14 +     21681 A----------A-------------------------AT-GT----TACAATTC
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306248 15 +  31847680 aaa--------a-------------------------A--AT----TGCAATCT
i Neomonachus_schauinslandi.NINY01007730.1               I 1 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9148659 13 -   9404916 a----------a-------------------------a--aT----TGCAATCT
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 1 C 0
s Nycticebus_bengalensis.LG01                            102578850 10 - 196305487 A----------A-------------------------AT-AT----TACA----
i Nycticebus_bengalensis.LG01                            I 1 C 0
s Nycticebus_coucang.k141_771082                               695 10 -      2667 A----------A-------------------------AT-AT----TACA----
i Nycticebus_coucang.k141_771082                         I 1 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749271 10 + 199412804 A----------A-------------------------AT-AT----TACA----
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 1 C 0
s Ochotona_princeps.JH802162.1                             1362719  1 +   3988456 A-----------------------------------------------------
i Ochotona_princeps.JH802162.1                           I 40 C 0
s Odobenus_rosmarus.KB229312.1                              505933 15 -   2017862 aaa--------a-------------------------A--AT----TGCAATCT
i Odobenus_rosmarus.KB229312.1                           I 1 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                    3581 14 -     28053 A----------A-------------------------A-GTCATAATAGA----
i Ondatra_zibethicus.OndZib_scaffold_46174               I 1 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    79498 14 +    102263 T----------A-------------------------A-GTCATAATATA----
i Onychomys_torridus.OnyTor_scaffold_2986                I 1 C 0
s Oryctolagus_cuniculus.CM000791.1                        67146392  1 + 174332312 A-----------------------------------------------------
i Oryctolagus_cuniculus.CM000791.1                       I 3 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       461627 13 -    559221 a----------a-------------------------a--aT----TGCAATCT
i Otocyon_megalotis.JAEUCK010005147.1                    I 1 C 0
s Otolemur_crassicaudatus.k141_222918                         3169 10 +      8798 A----------C-------------------------AT-AT----TGTG----
i Otolemur_crassicaudatus.k141_222918                    I 1 C 0
s Otolemur_garnettii.GL873799.1                             695333 10 -   1103335 A----------C-------------------------AT-AT----TGTG----
i Otolemur_garnettii.GL873799.1                          I 1 C 0
s Pan_paniscus.KQ411613.1                                    42746 14 +     80009 A----------A-------------------------AT-GT----TACAATTC
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189141656 14 + 189151597 A----------A-------------------------AT-GT----TACAATTC
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  150457 16 +    230217 aaaa-------A-------------------------A--AC----TGCCATCT
i Panthera_onca.PanOnc_flattened_line_3271               I 1 C 0
s Panthera_pardus.KV860321.1                                263662 17 +  18783137 aaaaa------a-------------------------a--ac----tgccatcT
i Panthera_pardus.KV860321.1                             I 1 C 0
s Panthera_tigris.KE722367.1                               4720300 17 -   8748460 aaaaa------a-------------------------a--ac----tgccatcT
i Panthera_tigris.KE722367.1                             I 1 C 0
s Papio_anubis.CM001495.2                                183441845 14 + 183742232 A----------A-------------------------AT-GT----TACCATTC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             5539 14 +     20448 A----------A-------------------------AT-GT----TACCATTC
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20562347 14 +  20919399 A----------A-------------------------AT-GT----TACCATTC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   4283 14 +     41871 A----------A-------------------------AT-GT----TACCATTC
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     7568 14 +     27711 A----------A-------------------------AT-GT----TACCATTC
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  7646 14 +      9205 A----------A-------------------------AT-GT----TACCATTC
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11920 14 -     78924 aa---------a-------------------------T--AA----TTCCTTCT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 1 C 0
s Perodicticus_ibeanus.k141_855320                            9318 10 +     13100 A----------A-------------------------AT-AT----TACA----
i Perodicticus_ibeanus.k141_855320                       I 1 C 0
s Perodicticus_potto.k141_1092580                             7720 10 +     25941 A----------A-------------------------AT-AT----TACA----
i Perodicticus_potto.k141_1092580                        I 1 C 0
s Peromyscus_maniculatus.KI615324.1                       18194119 14 -  18517816 T----------A-------------------------A-GTCATAATACA----
i Peromyscus_maniculatus.KI615324.1                      I 1 C 0
s Piliocolobus_badius.k141_1234363                           42307 14 +     62158 A----------A-------------------------AT-GT----TACAATGT
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        37038 14 +     89929 A----------A-------------------------AT-GT----TACAATGT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            38454 14 +     51399 A----------A-------------------------AT-GT----TACAATGT
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14294692 14 -  14605196 A----------A-------------------------AT-GT----TACAATGT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1117 13 +     22620 A----------G-------------------------A--AT----CACAATAT
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 1 C 0
s Pongo_abelii.CM009266.2                                189129790 14 + 189387572 A----------A-------------------------AT-GT----TACAATTC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9569398 14 +   9816681 A----------A-------------------------AT-GT----TACAATTC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               71979 14 -     81375 A----------A-------------------------AT-GT----TACAATTC
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              3799 14 +     19060 A----------A-------------------------AT-GT----TACAATTC
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2596143 14 -   4620579 a----------a-------------------------aa-at----gacaaCAC
i Prolemur_simus.MPIZ01000396.1                          I 1 C 0
s Propithecus_coquerelli.NW_012148875.1                     990113 14 +   2598838 a----------a-------------------------aa-at----aacaatac
i Propithecus_coquerelli.NW_012148875.1                  I 1 C 0
s Propithecus_coronatus.k141_347390                          28423 14 +     38485 A----------A-------------------------AA-AT----AACAATAC
i Propithecus_coronatus.k141_347390                      I 1 C 0
s Propithecus_diadema.k141_58108                               468 14 -     13098 A----------A-------------------------AA-AT----AGCAATAC
i Propithecus_diadema.k141_58108                         I 1 C 0
s Propithecus_edwardsi.k141_1176054                          25944 14 +     35766 A----------A-------------------------AA-AT----AACAATAC
i Propithecus_edwardsi.k141_1176054                      I 1 C 0
s Propithecus_perrieri.k141_1200571                           4132 14 -     24134 A----------A-------------------------AA-AT----AACAATAC
i Propithecus_perrieri.k141_1200571                      I 1 C 0
s Propithecus_tattersalli.k141_790011                        27954 14 -     67325 A----------A-------------------------AA-AT----AACAATAT
i Propithecus_tattersalli.k141_790011                    I 1 C 0
s Propithecus_verreauxi.k141_956661                           4176 14 -      6182 A----------A-------------------------AA-AT----AACAATAC
i Propithecus_verreauxi.k141_956661                      I 1 C 0
s Pteronotus_parnellii.KE909381.1                            13972 13 -     21811 G----------A-------------------------A--AT----TACAGTGT
i Pteronotus_parnellii.KE909381.1                        I 1 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39507 13 +     42204 a----------a-------------------------a--aT----TACAGTCT
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 1 C 0
s Pteropus_alecto.KB030862.1                              22976055 13 +  28871421 a----------a-------------------------a--at----aacaatat
i Pteropus_alecto.KB030862.1                             I 1 C 0
s Pteropus_vampyrus.KN525825.1                             1359141 13 +   4952924 a----------a-------------------------a--aT----TACAATAT
i Pteropus_vampyrus.KN525825.1                           I 1 C 0
s Puma_concolor.QAVW01001104.1                            20273585 42 -  38429054 aaaaa------aaaaaaaaaaaaaaaaaaaaaaaaaaa--ac----agccatct
i Puma_concolor.QAVW01001104.1                           I 1 C 0
s Pygathrix_cinerea.k141_1153803                             13810 14 -     91421 A----------A-------------------------AT-GT----TACAATTC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7607936 14 +   7812017 A----------A-------------------------AT-GT----TACAATTC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             13784 14 -     72585 A----------A-------------------------AT-GT----TACAATTC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53569985 14 +  90668790 A----------A-------------------------A-GTCATAATATA----
i Rattus_norvegicus.chr16                                I 1 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        367653  7 -   3329780 a----------a-------------------------a-aa---------aa--
i Rhinolophus_sinicus.LVEH01000134.1                     I 71 C 0
s Rhinopithecus_bieti.k119_217274                             5499 14 -     11128 A----------A-------------------------AT-GT----TACAATTC
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91234859 14 - 195417433 A----------A-------------------------AT-GT----TACAATTC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7670504 14 +   7961872 A----------A-------------------------AT-GT----TACAATTC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87073 13 -     96226 a----------a-------------------------a--aA----TACAATAT
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 1 C 0
s Saguinus_bicolor.k141_2619299                               6965 14 -      8359 A----------G-------------------------AT-AT----TACAATTC
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_imperator.k141_2524406                              906 14 +      2197 A----------G-------------------------AT-AT----TACAATTC
i Saguinus_imperator.k141_2524406                        C 0 C 0
s Saguinus_inustus.k141_699149                               12328 14 +     13640 A----------G-------------------------AT-AT----TACAATTC
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               7192 14 +      8564 A----------G-------------------------AT-AT----TACAATTC
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209468040 14 + 209938924 A----------G-------------------------AT-AT----TACAATTC
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 6754 14 -      9399 A----------G-------------------------AT-AT----TACAATTC
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119950019 14 - 121099817 A----------G-------------------------AT-AT----TACAATTc
i Saimiri_boliviensis.NW_024100920.1                     C 0 I 41
s Saimiri_cassiquiarensis.k141_2188234                       22475 14 +     46362 a----------g-------------------------at-at----tacaattc
i Saimiri_cassiquiarensis.k141_2188234                   C 0 I 41
s Saimiri_macrodon.k141_716185                               22570 14 +     45824 a----------g-------------------------at-at----tacaattc
i Saimiri_macrodon.k141_716185                           C 0 I 41
s Saimiri_oerstedii.k141_1487881                             39198 14 -     64574 a----------g-------------------------at-at----tacaattc
i Saimiri_oerstedii.k141_1487881                         C 0 I 41
s Saimiri_sciureus.k141_2278166                               2204 14 -     23631 a----------g-------------------------at-at----tacaattc
i Saimiri_sciureus.k141_2278166                          C 0 I 41
s Saimiri_ustus.k141_1484609                                 22463 14 -     61129 a----------g-------------------------at-at----tacaattc
i Saimiri_ustus.k141_1484609                             C 0 I 41
s Sapajus_apella.ctg103                                    5419413 14 -   5703754 A----------G-------------------------AT-AT----TACAATTC
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          54454 14 -     80660 A----------G-------------------------AT-AT----TACAATTC
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Semnopithecus_entellus.k141_11662                          18316 14 -     19888 A----------A-------------------------AT-GT----TACAATTC
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      25519 14 +     39453 A----------A-------------------------AT-GT----TACAATTC
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            6038 14 +     27826 A----------A-------------------------AT-GT----TACAATTC
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             5558 14 -     19483 A----------A-------------------------AT-GT----TACAATTC
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      5627 14 +      7198 A----------A-------------------------AT-GT----TACAATTC
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         13885 14 +     15514 A----------A-------------------------AT-GT----TACAATTC
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               3038 13 +   1910179 A----------A-------------------------G--AT----GACAACAT
i Solenodon_paradoxus.SolPar_flattened_line_126          I 2 C 0
s Sorex_araneus.JH798187.1                                13649946 13 -  18376816 G----------A-------------------------A--AG----AATAATAT
i Sorex_araneus.JH798187.1                               I 3 C 0
s Spermophilus_dauricus.KZ294078.1                         1952458  1 -   3870691 -------------------------------------A----------------
i Spermophilus_dauricus.KZ294078.1                       I 2 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30008 13 +     97271 a----------a-------------------------a--aT----TACAATCT
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 1 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              17592 13 -    196729 a----------a-------------------------a--aT----TTCAATCT
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 C 0
s Sus_scrofa.CM000828.4                                    6809777 13 +  69701581 A----------A-------------------------A--AT----TGCAATCT
i Sus_scrofa.CM000828.4                                  I 1 C 0
s Symphalangus_syndactylus.tarseq_199                      1092102 14 -   1523678 A----------A-------------------------AT-GT----TACAATTC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 9884 13 +     41958 A----------A-------------------------A--AT----CACAACAT
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 2 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118042 13 -    156842 a----------a-------------------------a--aT----TACAATAT
i Tapirus_indicus.TapInd_scaffold_9301                   I 1 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    386495 13 +    539355 a----------a-------------------------a--aT----TACAATAT
i Tapirus_terrestris.TapTer_scaffold_755                 I 1 C 0
s Tarsius_lariang.k141_2201908                               25722  8 +     70052 A----------A-------------------------A--AT----TA-----C
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                 557  8 -     16117 A----------A-------------------------A--AT----TA-----C
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186427211 14 + 186847797 A----------A-------------------------AT-GT----TACCATTC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     80214 13 +    610378 A----------A-------------------------A--AT----GATAATGT
i Tonatia_saurophila.TonSau_scaffold_294                 I 1 C 0
s Trachypithecus_auratus.k141_722599                          9610 14 -     20410 A----------A-------------------------AT-GT----TACAATTC
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    13806 14 +     15221 A----------A-------------------------AT-GT----TACAATTC
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        9711 14 +     19930 A----------A-------------------------AT-GT----TACAATTC
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       6138 14 -     19997 A----------A-------------------------AT-GT----TACAATTC
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            46267 14 -     60166 A----------A-------------------------AT-GT----TACAATTC
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        13733 14 -     27529 A----------A-------------------------AT-GT----TACAATTC
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     13677 14 -     18194 A----------A-------------------------AT-GT----TACAATTC
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           7405 14 -     21137 A----------A-------------------------AT-GT----TACAATTC
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    6108 14 -     10723 A----------A-------------------------AT-GT----TACAATTC
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         5264 14 +      9834 A----------A-------------------------AT-GT----TACAATTC
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        23577 14 +     32220 A----------A-------------------------AT-GT----TACAATTC
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5937679 14 +   6242583 A----------A-------------------------AT-GT----TACAATTC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        6932 14 +     20839 A----------A-------------------------AT-GT----TACAATTC
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2154964 14 +   4065304 aa---------a-------------------------a--at----tacaatat
i Tupaia_chinensis.KB320699.1                            I 1 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     8612 14 -     10553 A---------AA-------------------------A--AT----TACAATAT
i Tupaia_tana.TupTan_flattened_line_97126                I 1 C 0
s Ursus_maritimus.KK499267.1                               4849703 21 -   5085361 aaaaaaaaa--a-------------------------a--at----cacagtct
i Ursus_maritimus.KK499267.1                             I 1 C 0
s Varecia_rubra.k141_590885                                  10798 14 +     50397 A----------A-------------------------AA-AT----TACAATAC
i Varecia_rubra.k141_590885                              I 1 C 0
s Varecia_variegata.k141_1128296                             10853 14 +     24756 A----------A-------------------------AA-AT----TACAATAC
i Varecia_variegata.k141_1128296                         I 1 C 0
s Vicugna_pacos.KN270157.1                                 5371156 13 -   5488506 a----------a-------------------------a--aT----TACGATAT
i Vicugna_pacos.KN270157.1                               I 1 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10073 12 -     43706 a----------a-------------------------T---T----TGCAATCT
i Vulpes_lagopus.VulLag_flattened_line_30954             I 1 C 0
s Xerus_inauris.XerIna_scaffold_48378                        23439  9 -     24430 a----------a-------------------------a--ag----taaa----
i Xerus_inauris.XerIna_scaffold_48378                    I 1 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          4441 15 +     86975 aaa--------a-------------------------A--AT----TGCAATCT
i Zalophus_californianus.ZalCal_flattened_line_17732     I 1 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      14292 13 +     63895 A----------A-------------------------A--TCATAATATA----
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 1 C 0
e Echinops_telfairi.JH980293.1                            48779651 164 + 111700974 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   52652  8 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   3761  0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 71325 110 +    116680 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11304  0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152480  8 -    313613 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Psammomys_obesus.NESX01036370.1                             9755  0 -     21651 C
e Procavia_capensis.ProCapCap_scaffold_85530                 11991 249 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orycteropus_afer.OryAfe_flattened_line_144387               9003 16 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187970 110 +    196477 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    20898 16 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Meriones_unguiculatus.MerUng_scaffold_7390                 32121  0 +    140813 C
e Manis_pentadactyla.KN006162.1                              50341  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352  0 +    737560 C
e Loxodonta_africana.GL010049.1                            4216156 234 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_384612                 297 328 -       958 I
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Elephantulus_edwardii.JH947257.1                         1089466 1162 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            62473  5 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Condylura_cristata.JH655891.1                           17547413  8 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            172152 108 +    839153 I
e Choloepus_didactylus.ChoDid_scaffold_45914                 17052 108 +     19366 I
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_713168             206  0 -      2554 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    136758  0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       5412 5 +     62944 ATTGT
s Acinonyx_jubatus.LLWD01001279.1                           826620 5 -   1699592 GCCAT
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_11939                     24685 4 -     89785 -ACGT
i Acomys_cahirinus.AcoCah_scaffold_11939                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9509864 5 -  29979442 gCTCT
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             78635 5 -    347723 GCTCT
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     74025 4 -     89534 -TTAC
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   13332 5 -     52922 ATTGT
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         13273 5 -     28001 ATTGT
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          3719 5 -     18505 ATTGT
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           4568 5 -     12518 ATTGT
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                              2129 5 -     27731 ATTGT
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                2257 5 +      3134 ATTGT
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               2389 5 -     45847 ATTGT
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                23594 5 +     25266 ATTGT
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           2779 5 +      2906 ATTGT
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            16892 5 -     18578 ATTGT
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              2281 5 +     47717 ATTGT
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             2408 5 -      3544 ATTGT
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             13629 5 +     50774 ATTGT
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184365 5 +    412891 GCTGT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  14254 5 -     33861 ATTGT
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            14274 5 -     34016 ATTGT
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4296671 5 -   5030052 ATTGT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             14276 5 -     34685 ATTGT
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               27400 5 -     47192 ATTGT
i Aotus_vociferans.k141_344750                           C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       10699 4 +     14667 -TTAT
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3777 5 +     43469 GCTGT
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  53086 5 -     92717 ATTAT
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              53715 5 +     85213 ATTAT
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             4014 5 -     10423 ATTGT
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             23499 5 +     31915 ATTGT
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            3980 5 +      5267 ATTGT
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23589194 5 - 189096842 ATTGT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             10724 5 -     12001 ATTGT
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10001683 5 -  17673402 GCTAT
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334141 5 -   7040546 GCTAT
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  402424 5 -   1652518 GCTAT
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17798470 5 -  60362399 GCTCT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184527 5 -    185531 GCTCT
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9033913 5 -   9314153 GCTCT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17958178 5 -  59632846 GCTCT
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18499690 5 +  63665305 GCTCT
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007247396.1                           200722 5 +    308752 ATTAT
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                4140 5 -     11696 GCTGT
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     92301 5 +    217609 GCTAT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          8639 5 -     11392 ATTGT
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               4737 5 -      7577 ATTGT
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25650763 5 +  26074798 ATTGT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_398305                                  340 5 +      1777 ATTGT
i Cebus_olivaceus.k141_398305                            C 0 C 0
s Cebus_unicolor.k141_544048                                 48671 5 -     74725 ATTGT
i Cebus_unicolor.k141_544048                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         4737 5 +     31688 ATTAT
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12230731 5 +  27778364 GCTAT
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1758 5 -     25243 GCTAT
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4474285 5 +   4669795 ATTGT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        12834 5 -     19203 ATTGT
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           7256 5 +      8260 ATTGT
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           7482 5 +     27781 ATTGT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         7642 5 -     20310 ATTGT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          10621 5 +     29689 ATTGT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            5052 5 +      9989 ATTGT
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          13300 5 -     27936 ATTGT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            2166 5 -     17152 ATTGT
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38815704 5 +  39242232 ATTGT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21221395 5 -  21565898 ATTGT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       38513 5 -     53127 ATTGT
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        5784 5 +      7159 ATTGT
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       13316 5 -     27947 ATTGT
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         13289 5 +     17596 ATTGT
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          2523 5 +     26000 ATTGT
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             20473 5 -     52598 ATTAT
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           15840 5 +     57038 ATTAT
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           9916 5 +     11226 ATAGT
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18427273 5 -  18827391 ATTGT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       13710 5 -     50209 ATTGT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135420710 5 + 135778131 ATTGT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1909223 5 +   2368649 ATTGT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199948901 5 + 200372422 ATTGT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              35761 5 +     84244 ATTGT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          13602 5 -     20389 GCTAT
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 14 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 49444 4 +     63868 -GTAT
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11666922 4 + 224834208 -GTAT
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               1900 2 -     19598 GC---
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27769 5 -     87169 GCTAC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    836500 4 +   1526836 -TTAG
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12536703 5 -  12879189 ATTAT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8629156 5 +  20541912 gcTGT
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672581 5 +   1390856 GCTAT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    5334 5 +    198055 GCTAT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE759718.1                                   9812 5 +     11740 GCTGT
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          90415 4 +    110024 -GTAT
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01109367.1                             597 4 +      6299 -GTAT
i Ellobius_talpinus.LOJH01109367.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16328603 4 -  41312741 GCT-T
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144736 5 -  14770903 gcTAT
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1282644 5 +   4378816 GCTAT
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18530465 5 -  39960074 GCTAT
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               32480 5 +    498745 GCTAT
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21203881 5 -  21539334 ATTGT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13191 5 -     14127 ATTAT
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                5890 5 -     16928 TTTAT
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              14918 5 -     25546 ATTAT
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12118 5 +     26330 ATTAT
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 13357 5 +     23973 ATTAT
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12118 5 +     75513 ATTAT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10054 5 +     97555 ATTAT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            12974 5 +     26496 ATTAT
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  3592 5 -     17153 ATTAT
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13167 5 +    111500 ATTAT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20236271 5 + 206538554 GCCAT
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195114 5 + 205367284 GCCAT
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  8628 5 -     36744 GCCAT
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     425647 4 -    453645 -TTAT
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             3354 4 +     11339 -TTAT
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                             657 4 +     41679 -TTAT
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840                473 5 -      9135 ATTAT
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              14666 5 -     32273 ATTGT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186336813 5 + 186649187 ATTGT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6247 5 -     19426 ATTAT
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             11396 5 -     15286 ATTAT
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13035 5 +     18253 ATTAT
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13136 5 -     41752 ATTAT
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         12974 5 -     16460 ATTAT
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               241604 5 +    327341 GCTAT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hoolock_leuconedys.ctg274                                    433481 5 +    630532 GTTGT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  43764 5 +     55795 GTTAT
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_232023                                1247 5 -     12752 GTTGT
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                               1291 5 +     14092 GTTGT
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189542074 5 - 191637585 GTTGT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3334968 5 -  11177569 GTTGT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_3655594                                   21935 1 +     31101 ----T
i Indri_indri.k141_3655594                               C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    13145 5 -     42476 GCTGT
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15523479 5 -  30322482 ATTAT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        6270 5 +     64341 ATAGT
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           3597 5 +      4941 ATTGT
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        6313 5 +     35603 ATAGT
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    27790 5 +     38576 ATTGT
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         24487 5 +     66356 ATTGT
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         10363 5 -     23766 ATTAT
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             28429 5 +     45836 ATTAT
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                           974 5 +     25010 ATTAT
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      26365 5 +     54090 ATTAT
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3042141 5 +   3914936 GCTCT
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                              1435832 5 +   1826925 ATTGT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5033 4 +     11245 -TTAT
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1003883 4 +   6120653 -TTAT
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17954418 5 -  59628241 GCTCT
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               5646 5 +     40492 ATTGT
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59674909 5 +  60120075 ATTGT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 11424 5 -     26193 ATTGT
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            79207 5 -    114318 ATTGT
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  4904 5 -     23192 ATTGT
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                14366 5 -     29190 ATTGT
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  22931 5 +     37952 ATTGT
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186838022 5 + 187317192 ATTGT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25456583 5 -  25927173 ATTGT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  78782 5 +     89720 ATTGT
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 5780 5 +     20474 ATTGT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   5580 5 -     14993 ATTGT
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  328451 5 -    668171 ATTGT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 3892 5 -     24072 ATTGT
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               24519 5 -     45290 ATTGT
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 89897 5 +     94391 GCTAT
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23936105 5 -  24302211 ATTGT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               350235 5 +    752769 ATTGT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         9621 5 -    207569 GCTAT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              9320 4 +     13704 GCT-T
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 32121 4 +    140813 -ATAT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12181604 4 -  29670104 -GTAT
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                4554 5 -      7380 ATTGT
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               3627 5 +     18990 ATTGT
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      4566 5 -      7356 ATTGT
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18290879 5 -  93316391 ATTAT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                14697 5 -     19307 GCTGT
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849928 5 +   8254450 GCTGA
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             33605 5 +     64694 GCTGA
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           7830 5 -     28506 ATTGT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         5009 5 -      8324 GCTCT
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      8425 5 -     37649 ATTAT
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140643 5 -    366855 GCTGT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   34716 5 +     37127 GCTAT
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5800 5 +     14753 GCTGT
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84360725 4 - 120012414 -GTAT
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87649725 4 - 129401213 -GTAT
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31354381 4 -  89631738 -GTAT
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90751786 4 - 130317789 -GTAT
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               300498 4 -  14710649 GCT-T
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                278973 5 -  10118263 GCTGT
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1586666 5 -   6019432 gcTAT
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902738 5 -   4330536 gcTGT
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        33293 5 +     33610 GCTGT
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Nannospalax_galili.KL204047.1                            2033210 3 -   3037898 --TAT
i Nannospalax_galili.KL204047.1                          I 4 C 0
s Nasalis_larvatus.k141_413338                               13825 5 +     21681 ATTGT
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306263 5 +  31847680 GCTCT
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9148672 5 -   9404916 GCTCT
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102578860 4 - 196305487 -TTAT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_771082                               705 4 -      2667 -TTAT
i Nycticebus_coucang.k141_771082                         C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749281 4 + 199412804 -TTAT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                              505948 5 -   2017862 GCTCT
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                    3595 4 -     28053 -ATAT
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    79512 4 +    102263 -GTAT
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       461640 5 -    559221 GCTCT
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         3179 4 +      8798 -TTAT
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             695343 4 -   1103335 -TTAT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    42760 5 +     80009 ATTGT
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189141670 5 + 189151597 ATTGT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  150473 5 +    230217 GCCAT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                263679 5 +  18783137 GCCAT
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4720317 5 -   8748460 GCCAT
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183441859 5 + 183742232 ATTGT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             5553 5 +     20448 ATTGT
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20562361 5 +  20919399 ATTGT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   4297 5 +     41871 ATTGT
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     7582 5 +     27711 ATTGT
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  7660 5 +      9205 ATTGT
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11934 5 -     78924 GCTAT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            9328 4 +     13100 -TTAT
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             7730 4 +     25941 -TTAT
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18194133 4 -  18517816 -GTAT
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Piliocolobus_badius.k141_1234363                           42321 5 +     62158 ATTGT
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        37052 5 +     89929 ATTGT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            38468 5 +     51399 ATTGT
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14294706 5 -  14605196 ATTGT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1130 5 +     22620 GTCAT
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189129804 5 + 189387572 ATTGT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9569412 5 +   9816681 ATTGT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               71993 5 -     81375 ATTGT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              3813 5 +     19060 ATTGT
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2596157 5 -   4620579 ATTAT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990127 5 +   2598838 gTTAT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          28437 5 +     38485 GTTAT
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                               482 5 -     13098 GTTAT
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          25958 5 +     35766 GTTAT
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4146 5 -     24134 GTTAT
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        27968 5 -     67325 GTTAT
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4190 5 -      6182 GTTAT
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             9755 4 -     21651 -ATAT
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            13985 5 -     21811 GTTGT
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39520 4 +     42204 GCT-T
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22976068 5 +  28871421 gctAT
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1359154 5 +   4952924 GCTAT
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20273627 5 -  38429054 GCCAT
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             13824 5 -     91421 ATTGT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7607950 5 +   7812017 ATTGT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             13798 5 -     72585 ATTGT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53569999 4 +  90668790 -GTAT
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             5513 5 -     11128 ATTGT
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91234873 5 - 195417433 ATTGT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7670518 5 +   7961872 ATTGT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87086 5 -     96226 GCTAT
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               6979 5 -      8359 ATAGT
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_imperator.k141_2524406                              920 5 +      2197 ATAGT
i Saguinus_imperator.k141_2524406                        C 0 C 0
s Saguinus_inustus.k141_699149                               12342 5 +     13640 ATAGT
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               7206 5 +      8564 ATAGT
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209468054 5 + 209938924 ATAGT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 6768 5 -      9399 ATAGT
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119950074 5 - 121099817 atTGT
i Saimiri_boliviensis.NW_024100920.1                     I 41 C 0
s Saimiri_cassiquiarensis.k141_2188234                       22530 5 +     46362 ATTGT
i Saimiri_cassiquiarensis.k141_2188234                   I 41 C 0
s Saimiri_macrodon.k141_716185                               22625 5 +     45824 ATTGT
i Saimiri_macrodon.k141_716185                           I 41 C 0
s Saimiri_oerstedii.k141_1487881                             39253 5 -     64574 ATTGT
i Saimiri_oerstedii.k141_1487881                         I 41 C 0
s Saimiri_sciureus.k141_2278166                               2259 5 -     23631 ATTGT
i Saimiri_sciureus.k141_2278166                          I 41 C 0
s Saimiri_ustus.k141_1484609                                 22518 5 -     61129 ATTGT
i Saimiri_ustus.k141_1484609                             I 41 C 0
s Sapajus_apella.ctg103                                    5419427 5 -   5703754 ATTGT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          54468 5 -     80660 ATTGT
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Semnopithecus_entellus.k141_11662                          18330 5 -     19888 ATTGT
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      25533 5 +     39453 ATTGT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            6052 5 +     27826 ATTGT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             5572 5 -     19483 ATTGT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      5641 5 +      7198 ATTGT
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         13899 5 +     15514 ATTGT
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               3051 5 +   1910179 ACACA
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13649959 2 -  18376816 GC---
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30021 5 +     97271 GCTCT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              17605 5 -    196729 GCTAT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6809790 5 +  69701581 ACTAT
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1092116 5 -   1523678 GTTGT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 9897 5 +     41958 GCTGT
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118055 5 -    156842 GCTAT
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    386508 5 +    539355 GCTAT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               25730 5 +     70052 ATTAT
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                 565 5 -     16117 ATTAT
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186427225 5 + 186847797 ATTGT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     80227 5 +    610378 GCTGT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          9624 5 -     20410 ATTGT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    13820 5 +     15221 ATTGT
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        9725 5 +     19930 ATTGT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       6152 5 -     19997 ATTGT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            46281 5 -     60166 ATTGT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        13747 5 -     27529 ATTGT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     13691 5 -     18194 ATTGT
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           7419 5 -     21137 ATTGT
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    6122 5 -     10723 ATTGT
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         5278 5 +      9834 ATTGT
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        23591 5 +     32220 ATTGT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5937693 5 +   6242583 ATTGT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        6946 5 +     20839 ATTGT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2154978 5 +   4065304 atgAT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     8626 5 -     10553 ATTAT
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4849724 5 -   5085361 gTTCT
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  10812 5 +     50397 ATTAT
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             10867 5 +     24756 ATTAT
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371169 5 -   5488506 GCTAT
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10085 5 -     43706 GCTCT
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        23448 3 -     24430 -ata-
i Xerus_inauris.XerIna_scaffold_48378                    C 0 I 219
s Zalophus_californianus.ZalCal_flattened_line_17732          4456 5 +     86975 GCTCT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      14305 4 +     63895 -TTAT
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Echinops_telfairi.JH980293.1                            48779651 164 + 111700974 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   52652 8 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   3761 0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937 0 +    114563 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 71325 110 +    116680 I
e Spermophilus_dauricus.KZ294078.1                         1952459 0 -   3870691 C
e Sigmodon_hispidus.SigHis_scaffold_60841                    11304 0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152480 8 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Procavia_capensis.ProCapCap_scaffold_85530                 11991 249 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813 0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Oryctolagus_cuniculus.CM000791.1                        67146393 0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               9003 16 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1362720 0 +   3988456 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              187970 110 +    196477 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    20898 16 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Marmota_marmota.CZRN01000018.1                          33101572 0 -  40650429 C
e Manis_pentadactyla.KN006162.1                              50341 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352 0 +    737560 C
e Loxodonta_africana.GL010049.1                            4216156 234 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     5564 0 -     14121 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Ictidomys_tridecemlineatus.JH393364.1                    7519262 0 -   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547 0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_384612                 297 328 -       958 I
e Heterocephalus_glaber.JH602082.1                        20660051 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Elephantulus_edwardii.JH947257.1                         1089466 1162 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084 0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            62473 5 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Condylura_cristata.JH655891.1                           17547413 8 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            172152 108 +    839153 I
e Choloepus_didactylus.ChoDid_scaffold_45914                 17052 108 +     19366 I
e Chinchilla_lanigera.JH722012.1                           1251498 0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_713168             206 0 -      2554 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157 0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    136758 0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      11194 23 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       5417 1 +     62944 T
s Acinonyx_jubatus.LLWD01001279.1                           826625 1 -   1699592 T
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_11939                     24689 1 -     89785 T
i Acomys_cahirinus.AcoCah_scaffold_11939                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9509869 1 -  29979442 C
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             78640 1 -    347723 C
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   13337 1 -     52922 T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         13278 1 -     28001 T
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          3724 1 -     18505 T
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           4573 1 -     12518 T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                              2134 1 -     27731 T
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                2262 1 +      3134 T
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               2394 1 -     45847 T
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                23599 1 +     25266 T
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_1406484                           2784 1 +      2906 T
i Alouatta_macconnelli.k141_1406484                      C 0 C 0
s Alouatta_nigerrima.k141_3472759                            16897 1 -     18578 T
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              2286 1 +     47717 T
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             2413 1 -      3544 T
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             13634 1 +     50774 T
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184370 1 +    412891 T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  14259 1 -     33861 T
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            14279 1 -     34016 T
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4296676 1 -   5030052 T
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             14281 1 -     34685 T
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               27405 1 -     47192 T
i Aotus_vociferans.k141_344750                           C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       10703 1 +     14667 T
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3782 1 +     43469 T
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  53091 1 -     92717 T
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              53720 1 +     85213 T
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             4019 1 -     10423 T
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             23504 1 +     31915 T
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            3985 1 +      5267 C
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23589199 1 - 189096842 T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             10729 1 -     12001 T
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10001688 1 -  17673402 T
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334146 1 -   7040546 T
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  402429 1 -   1652518 T
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17798475 1 -  60362399 T
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184532 1 -    185531 T
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9033918 1 -   9314153 T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17958183 1 -  59632846 T
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18499695 1 +  63665305 T
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007247396.1                           200727 1 +    308752 A
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                4145 1 -     11696 T
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     92306 1 +    217609 T
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          8644 1 -     11392 T
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               4742 1 -      7577 T
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25650768 1 +  26074798 T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_398305                                  345 1 +      1777 T
i Cebus_olivaceus.k141_398305                            C 0 C 0
s Cebus_unicolor.k141_544048                                 48676 1 -     74725 T
i Cebus_unicolor.k141_544048                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         4742 1 +     31688 A
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12230736 1 +  27778364 T
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1763 1 -     25243 T
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4474290 1 +   4669795 T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        12839 1 -     19203 T
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           7261 1 +      8260 T
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           7487 1 +     27781 T
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         7647 1 -     20310 T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          10626 1 +     29689 T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            5057 1 +      9989 T
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          13305 1 -     27936 T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            2171 1 -     17152 T
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38815709 1 +  39242232 T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21221400 1 -  21565898 T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       38518 1 -     53127 T
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        5789 1 +      7159 T
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       13321 1 -     27947 T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         13294 1 +     17596 T
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          2528 1 +     26000 T
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             20478 1 -     52598 T
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           15845 1 +     57038 T
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           9921 1 +     11226 T
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18427278 1 -  18827391 T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       13715 1 -     50209 T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135420715 1 + 135778131 T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 17160 1 +     19366 T
i Choloepus_didactylus.ChoDid_scaffold_45914             I 108 C 0
s Choloepus_hoffmanni.KN194906.1                            172260 1 +    839153 T
i Choloepus_hoffmanni.KN194906.1                         I 108 C 0
s Colobus_angolensis.KN981557.1                            1909228 1 +   2368649 T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199948906 1 + 200372422 T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              35766 1 +     84244 T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          13607 1 -     20389 T
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 49448 1 +     63868 T
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11666926 1 + 224834208 T
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27774 1 -     87169 T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    836504 1 +   1526836 T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12536708 1 -  12879189 T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8629161 1 +  20541912 T
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672586 1 +   1390856 T
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    5339 1 +    198055 T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE759718.1                                   9817 1 +     11740 T
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          90419 1 +    110024 T
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01109367.1                             601 1 +      6299 T
i Ellobius_talpinus.LOJH01109367.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16328607 1 -  41312741 C
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144741 1 -  14770903 T
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1282649 1 +   4378816 T
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18530470 1 -  39960074 T
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               32485 1 +    498745 T
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21203886 1 -  21539334 T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13196 1 -     14127 T
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                5895 1 -     16928 T
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              14923 1 -     25546 T
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12123 1 +     26330 T
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 13362 1 +     23973 T
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12123 1 +     75513 T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10059 1 +     97555 T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            12979 1 +     26496 T
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  3597 1 -     17153 T
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13172 1 +    111500 T
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20236276 1 + 206538554 T
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195119 1 + 205367284 T
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  8633 1 -     36744 T
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     425651 1 -    453645 T
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             3358 1 +     11339 T
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                             661 1 +     41679 T
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840                478 1 -      9135 T
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              14671 1 -     32273 T
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186336818 1 + 186649187 T
i Gorilla_gorilla.LT578341.1                             C 0 I 122
s Hapalemur_alaotrensis.k141_170648                           6252 1 -     19426 T
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             11401 1 -     15286 T
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13040 1 +     18253 T
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13141 1 -     41752 T
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         12979 1 -     16460 T
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               241609 1 +    327341 T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_596025                  41 1 +       452 c
i Heterohyrax_brucei.HetBruBak_scaffold_596025           n 328 I 2
s Hoolock_leuconedys.ctg274                                    433486 1 +    630532 T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  43769 1 +     55795 T
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_232023                                1252 1 -     12752 T
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                               1296 1 +     14092 T
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189542079 1 - 191637585 T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3334973 1 -  11177569 T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7519262 1 -   7955117 T
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 36
s Indri_indri.k141_3655594                                   21936 1 +     31101 T
i Indri_indri.k141_3655594                               C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    13150 1 -     42476 T
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15523484 1 -  30322482 T
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        6275 1 +     64341 T
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           3602 1 +      4941 T
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        6318 1 +     35603 T
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    27795 1 +     38576 T
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         24492 1 +     66356 T
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         10368 1 -     23766 T
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             28434 1 +     45836 T
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                           979 1 +     25010 T
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      26370 1 +     54090 T
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3042146 1 +   3914936 T
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                              1435837 1 +   1826925 T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5037 1 +     11245 T
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1003887 1 +   6120653 T
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4216390 1 -  43346337 t
i Loxodonta_africana.GL010049.1                          I 234 I 2
s Lycaon_pictus.CM007581.1                                17954423 1 -  59628241 T
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               5651 1 +     40492 T
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59674914 1 +  60120075 T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 11429 1 -     26193 T
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            79212 1 -    114318 T
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  4909 1 -     23192 T
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                14371 1 -     29190 T
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  22936 1 +     37952 T
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186838027 1 + 187317192 T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25456588 1 -  25927173 T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  78787 1 +     89720 T
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 5785 1 +     20474 T
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   5585 1 -     14993 T
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  328456 1 -    668171 T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 3897 1 -     24072 T
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               24524 1 -     45290 T
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 89902 1 +     94391 T
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23936110 1 -  24302211 T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               350240 1 +    752769 T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33101572 1 -  40650429 C
i Marmota_marmota.CZRN01000018.1                         C 0 I 36
s Megaderma_lyra.MegLyr_scaffold_4542                         9626 1 -    207569 T
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              9324 1 +     13704 C
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 32125 1 +    140813 T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12181608 1 -  29670104 T
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                4559 1 -      7380 T
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               3632 1 +     18990 T
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      4571 1 -      7356 T
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18290884 1 -  93316391 T
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    20914 1 -    145209 t
i Microgale_talazaci.MicTal_scaffold_6613                I 16 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                14702 1 -     19307 T
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849933 1 +   8254450 T
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             33610 1 +     64694 T
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           7835 1 -     28506 T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         5014 1 -      8324 T
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      8430 1 -     37649 T
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140648 1 -    366855 T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   34721 1 +     37127 T
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5805 1 +     14753 T
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84360729 1 - 120012414 T
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87649729 1 - 129401213 T
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31354385 1 -  89631738 T
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90751790 1 - 130317789 T
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               300502 1 -  14710649 C
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                278978 1 -  10118263 T
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1586671 1 -   6019432 T
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902743 1 -   4330536 T
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        33298 1 +     33610 T
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              188080 1 +    196477 A
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 110 C 0
s Nannospalax_galili.KL204047.1                            2033213 1 -   3037898 T
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               13830 1 +     21681 T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306268 1 +  31847680 T
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9148677 1 -   9404916 t
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102578864 1 - 196305487 T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_771082                               709 1 -      2667 T
i Nycticebus_coucang.k141_771082                         C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749285 1 + 199412804 T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                              505953 1 -   2017862 T
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                    3599 1 -     28053 T
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    79516 1 +    102263 T
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9019 1 -     18566 t
i Orycteropus_afer.OryAfe_flattened_line_144387          I 16 I 79
s Otocyon_megalotis.JAEUCK010005147.1                       461645 1 -    559221 T
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         3183 1 +      8798 T
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             695347 1 -   1103335 T
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    42765 1 +     80009 T
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189141675 1 + 189151597 T
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  150478 1 +    230217 T
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                263684 1 +  18783137 T
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4720322 1 -   8748460 T
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183441864 1 + 183742232 T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             5558 1 +     20448 T
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20562366 1 +  20919399 T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   4302 1 +     41871 T
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     7587 1 +     27711 T
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  7665 1 +      9205 T
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11939 1 -     78924 T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            9332 1 +     13100 T
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             7734 1 +     25941 T
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18194137 1 -  18517816 T
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Piliocolobus_badius.k141_1234363                           42326 1 +     62158 T
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        37057 1 +     89929 T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            38473 1 +     51399 T
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14294711 1 -  14605196 T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1135 1 +     22620 T
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189129809 1 + 189387572 T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9569417 1 +   9816681 T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               71998 1 -     81375 T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              3818 1 +     19060 T
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 12240 1 -     22811 c
i Procavia_capensis.ProCapCap_scaffold_85530             I 249 I 2
s Prolemur_simus.MPIZ01000396.1                            2596162 1 -   4620579 T
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990132 1 +   2598838 T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          28442 1 +     38485 T
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                               487 1 -     13098 T
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          25963 1 +     35766 T
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4151 1 -     24134 T
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        27973 1 -     67325 T
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4195 1 -      6182 T
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             9759 1 -     21651 T
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            13990 1 -     21811 G
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39524 1 +     42204 C
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22976073 1 +  28871421 T
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1359159 1 +   4952924 T
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20273632 1 -  38429054 T
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             13829 1 -     91421 T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7607955 1 +   7812017 T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             13803 1 -     72585 T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53570003 1 +  90668790 C
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             5518 1 -     11128 T
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91234878 1 - 195417433 T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7670523 1 +   7961872 T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87091 1 -     96226 T
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               6984 1 -      8359 T
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_imperator.k141_2524406                              925 1 +      2197 T
i Saguinus_imperator.k141_2524406                        C 0 C 0
s Saguinus_inustus.k141_699149                               12347 1 +     13640 T
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               7211 1 +      8564 T
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209468059 1 + 209938924 T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 6773 1 -      9399 T
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119950079 1 - 121099817 T
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       22535 1 +     46362 T
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               22630 1 +     45824 T
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             39258 1 -     64574 T
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               2264 1 -     23631 T
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 22523 1 -     61129 T
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5419432 1 -   5703754 T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          54473 1 -     80660 T
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Semnopithecus_entellus.k141_11662                          18335 1 -     19888 T
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      25538 1 +     39453 T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            6057 1 +     27826 T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             5577 1 -     19483 T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      5646 1 +      7198 T
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         13904 1 +     15514 T
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               3056 1 +   1910179 C
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1952459 1 -   3870691 C
i Spermophilus_dauricus.KZ294078.1                       C 0 I 36
s Spilogale_gracilis.SpiGra_flattened_line_13525             30026 1 +     97271 C
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              17610 1 -    196729 T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6809795 1 +  69701581 T
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1092121 1 -   1523678 T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 9902 1 +     41958 T
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 71435 1 +    116680 A
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 110 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118060 1 -    156842 T
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    386513 1 +    539355 T
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               25735 1 +     70052 A
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                 570 1 -     16117 A
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186427230 1 + 186847797 T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     80232 1 +    610378 T
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          9629 1 -     20410 T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    13825 1 +     15221 T
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        9730 1 +     19930 T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       6157 1 -     19997 T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            46286 1 -     60166 T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        13752 1 -     27529 T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     13696 1 -     18194 T
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           7424 1 -     21137 T
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    6127 1 -     10723 T
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         5283 1 +      9834 T
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        23596 1 +     32220 T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5937698 1 +   6242583 T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        6951 1 +     20839 T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2154983 1 +   4065304 T
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     8631 1 -     10553 T
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4849729 1 -   5085361 C
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  10817 1 +     50397 T
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             10872 1 +     24756 T
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371174 1 -   5488506 T
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10090 1 -     43706 T
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        23670 1 -     24430 t
i Xerus_inauris.XerIna_scaffold_48378                    I 219 I 31
s Zalophus_californianus.ZalCal_flattened_line_17732          4461 1 +     86975 T
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Echinops_telfairi.JH980293.1                            48779651 164 + 111700974 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      14309 0 +     63895 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   52652 8 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   3761 0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937 0 +    114563 C
e Sorex_araneus.JH798187.1                                13649961 0 -  18376816 C
e Sigmodon_hispidus.SigHis_scaffold_60841                    11304 0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152480 8 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813 0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Oryctolagus_cuniculus.CM000791.1                        67146393 0 + 174332312 C
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1362720 0 +   3988456 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50341 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352 0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     5564 0 -     14121 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547 0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Elephantulus_edwardii.JH947257.1                         1089466 1162 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084 0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            62473 5 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Crocidura_indochinensis.CroInd_scaffold_37019               1902 0 -     19598 C
e Condylura_cristata.JH655891.1                           17547413 8 -  53390261 I
e Chinchilla_lanigera.JH722012.1                           1251498 0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_713168             206 0 -      2554 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157 0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    136758 0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      11194 23 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74029 0 -     89534 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       5418 122 +     62944 Tagtcct-gttgttgatataggagttaaaaagaaattacttgagcagatagtgagggtacaaaagtgctcggtaaaggttttcttttttagtgaaaaggagacccaaagtcactttctaagaa
s Acinonyx_jubatus.LLWD01001279.1                           826626   8 -   1699592 TTATCTT-G------------------------------------------------------------------------------------------------------------------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_11939                     24690   5 -     89785 TAAGC----------------------------------------------------------------------------------------------------------------------
i Acomys_cahirinus.AcoCah_scaffold_11939                 C 0 I 3
s Ailuropoda_melanoleuca.LNAT01000098.1                    9509870   8 -  29979442 TAATCct-g------------------------------------------------------------------------------------------------------------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             78641   8 -    347723 TAATCTT-G------------------------------------------------------------------------------------------------------------------
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     74029   5 -     89534 TAATA----------------------------------------------------------------------------------------------------------------------
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 3
s Allenopithecus_nigroviridis.k141_3361533                   13338 122 -     52922 TAGTCCT-GTTGTtgatataggagttaaaaagcaattacttaagcagatagcaagggtacagaagtactcggtaaaggttttcctttttaatgaaaaggagtcccaaagtcactttctaagaa
i Allenopithecus_nigroviridis.k141_3361533               C 0 I 1
s Allochrocebus_lhoesti.k141_4309873                         13279 122 -     28001 TAGTCCT-GTTGTtgatataggagttaaaaagcaattacttaagcagatagcgagggtacagaagtactcggtaaaggttttcctttttaatgaaaaggagtcccaaagtcactctctaagaa
i Allochrocebus_lhoesti.k141_4309873                     C 0 I 1
s Allochrocebus_preussi.k141_1442296                          3725 122 -     18505 TAGTCCT-GTTGTtgatataggagttaaaaagcaattacttaagcagatagcgagggtacagaagtactcggtaaaggttttcctttttaatgaaaaggagtcccaaagtcactttctaagaa
i Allochrocebus_preussi.k141_1442296                     C 0 I 1
s Allochrocebus_solatus.k141_166128                           4574 122 -     12518 TAGTCCT-GTTGTtgatataggagttaaaaagcaattacttaagcagatagcgagggtacagaagtactcggtaaaggttttcctttttaatgaaaaggagtcccaaagtcactttctaagaa
i Allochrocebus_solatus.k141_166128                      C 0 I 1
s Alouatta_belzebul.k141_3238538                              2135 119 -     27731 TAGTCCT-GTTGTGgatataggggttaaacagaaattacttaagcagatagtgagggtacagaagtcctcggtaaagattttccgttgtaatgaag---agttgcaaagtcactttctaagaa
i Alouatta_belzebul.k141_3238538                         C 0 I 1
s Alouatta_caraya.k141_1743867                                2263 119 +      3134 TAGTCCT-GTTGTGgatataggggttaaacagaaattacttaagcagatagtgagggtacagaagtcctcggtaaagattttccgttttaatgaaa---agttgcaaagtcactttctaagaa
i Alouatta_caraya.k141_1743867                           C 0 I 1
s Alouatta_discolor.k141_743489                               2395 119 -     45847 TAGTCCT-GTTGTGgatataggggttaaacagaaattacttaagcagatagtgagggtacagaagtcctcggtaaagattttccgttttaatgaaa---agttccaaagtcactttctaagaa
i Alouatta_discolor.k141_743489                          C 0 I 1
s Alouatta_juara.k141_1509701                                23600 119 +     25266 TAGTCCT-GTTGTGgatataggggttaaacagaaattacttaagcagatagtgagggtacagaagtcctcggtaaagattttccgttttaatgaaa---agttccaaagtcactttctaagaa
i Alouatta_juara.k141_1509701                            C 0 I 1
s Alouatta_macconnelli.k141_1406484                           2785 119 +      2906 TAGTCCT-GTTGTGgatataggggttaaacagaaattacttaagcagatagtgagggtacagaagtcctcggtaaagattttccgttttaatgaaa---agttccaaagtcactttctaagaa
i Alouatta_macconnelli.k141_1406484                      C 0 I 1
s Alouatta_nigerrima.k141_3472759                            16898 119 -     18578 TAGTCCT-GTTGTGgatataggggttaaacagaaattacttaagcagatagtgagggtacagaagtcctcggtaaagattttccgttttaatgaaa---agttccaaagtcactttctaagaa
i Alouatta_nigerrima.k141_3472759                        C 0 I 1
s Alouatta_palliata.k141_2135620                              2287 119 +     47717 TAGTCCT-GTTGTGgatataggagttaaacagaaattacttaagcagatagtgagggtacagaagtcctcggtaaagattttccgttttaatgaaa---agttgcaaagtcggtttctaagaa
i Alouatta_palliata.k141_2135620                         C 0 I 1
s Alouatta_puruensis.k141_1253230                             2414 119 -      3544 TAGTCCT-GTTGTGgatataggggttaaacagaaattacttaagcagatagtgagggtacagaagtcctcggtaaagattttccgttttaatgaaa---agttccagagtcactttctaagaa
i Alouatta_puruensis.k141_1253230                        C 0 I 1
s Alouatta_seniculus.k141_117119                             13635 119 +     50774 TAGTCCT-GTTGTGgatataggggttaaacagaaattacttaagcagatagtgagggtacagaagtcctcggtaaagattttccgttttaatgaaa---agttccaaagtcactttctaagaa
i Alouatta_seniculus.k141_117119                         C 0 I 1
s Anoura_caudifer.AnoCau_scaffold_1412                      184371   8 +    412891 TAGTCCT-G------------------------------------------------------------------------------------------------------------------
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  14260 119 -     33861 TAGTCCT-GTTGTGgacataggagttaaaaagaaattacttaagcagatagtgaaggtacagaagtcctcggtcaagattttccattttaatgaaa---agtcccaaagtcattttctaagaa
i Aotus_azarae.k141_3104676                              C 0 I 1
s Aotus_griseimembra.k141_2240599                            14280 119 -     34016 TAGTCCT-GTTGTGgacataggagttaaaaagaaattacttaagcagatagtgaaggtacagaagtcctcggtaaagattttccattttaatgaaa---agtcccaaagtcactttctaagaa
i Aotus_griseimembra.k141_2240599                        C 0 I 1
s Aotus_nancymaae.KZ198451.1                               4296677 119 -   5030052 TAGTCCT-GTTGTGGAcataggagttaaaaagaaattacttaagcAGATAGTGAAGGTACAGAAGTCCTCGGTCaagattttccattttaatgaaa---AGTCCCAAAGTCACTTTCTAAGAA
i Aotus_nancymaae.KZ198451.1                             C 0 I 1
s Aotus_trivirgatus.k141_2152450                             14282 119 -     34685 TAGTCCT-GTTGTGgacataggagttaaaaagaaattacttaagcagatagtgaaggtacagaagtcctcggtcaagattttccattttaatgaaa---agtcccaaagtcactttctaagaa
i Aotus_trivirgatus.k141_2152450                         C 0 I 1
s Aotus_vociferans.k141_344750                               27406 119 -     47192 TAGTCCT-GTTGTGgacataggagttaaaaagaaattacttaagcagatagtgaaggtacagaagtcctcggtcaagattttccattttaatgaaa---agtcccaaagtcattttctaagaa
i Aotus_vociferans.k141_344750                           C 0 I 1
s Arctocebus_calabarensis.k141_2318572                       10704   8 +     14667 TAATCCC-A------------------------------------------------------------------------------------------------------------------
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3783   8 +     43469 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  53092   8 -     92717 CGATCTT-G------------------------------------------------------------------------------------------------------------------
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              53721   8 +     85213 CGATCTT-G------------------------------------------------------------------------------------------------------------------
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             4020 119 -     10423 TAGTCCT-GCTGTGgatataggagttaaaaagaaattacttaagcagatagagaaggtacggaagtcctcggtaaagattttctgttttaatgaaa---agtcccaaagtcactttctaagaa
i Callibella_humilis.k141_1278103                        C 0 I 1
s Callimico_goeldii.k141_1091182                             23505 119 +     31915 TAGTCCT-GCTGTGgatataggagttaaaaagaaattacttaagcagatagtgaaggtacagaagtcctcggtaaagattttccgttttaatgaaa---agtcccaaagtcactttctaagaa
i Callimico_goeldii.k141_1091182                         C 0 I 1
s Callithrix_geoffroyi.k119_512088                            3986 119 +      5267 TAGTCCT-GCTGTGgatataggaattaaaatgaaattacttaagcagatagtgaaggtacggaagtcctcggtaaagattttctgttttaatgaaa---ggtcccaaagtcactttctaagaa
i Callithrix_geoffroyi.k119_512088                       C 0 I 1
s Callithrix_jacchus.pat_scaffold_3                       23589200 119 - 189096842 TAGTCCT-gctgtggatataggaattaaaaagaaattacttaagcagatagtgaaggtacggaagtcctcggtaaagattttctgttttaatgaaa---agtcccaaagtcactttctAAGAA
i Callithrix_jacchus.pat_scaffold_3                      C 0 I 1
s Callithrix_kuhlii.k119_1164682                             10730 119 -     12001 TAGTCCT-GCTGTGgatataggaattaaaaagaaattacttaagcagatagtgaaggtacggaagtcctcggtaaagattttctgttttaatgaaa---agtcccaaagtcactttctaagaa
i Callithrix_kuhlii.k119_1164682                         C 0 I 1
s Camelus_bactrianus.KN276810.1                           10001689   8 -  17673402 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334147   8 -   7040546 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  402430   8 -   1652518 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17798476   8 -  60362399 TAATGTT-G------------------------------------------------------------------------------------------------------------------
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184533   8 -    185531 TAATGTT-G------------------------------------------------------------------------------------------------------------------
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9033919   8 -   9314153 TAATGTT-G------------------------------------------------------------------------------------------------------------------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17958184   8 -  59632846 TAATGTT-G------------------------------------------------------------------------------------------------------------------
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18499696   8 +  63665305 TAATGTT-G------------------------------------------------------------------------------------------------------------------
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007247396.1                           200728   8 +    308752 TAATTCT-G------------------------------------------------------------------------------------------------------------------
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                4146   8 -     11696 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     92307   8 +    217609 TCATCCT-G------------------------------------------------------------------------------------------------------------------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          8645 119 -     11392 TAGTCCT-GCTGTGgatataggagttaaaaagaaattacttaagcagatagtgaaggtacggaagtcctcggtaaagattttctgttttaatgaaa---agtcccaaagtcactttctaagaa
i Cebuella_niveiventris.k141_1251222                     C 0 I 1
s Cebuella_pygmaea.k141_1309012                               4743 119 -      7577 TAGTCCT-GCTGTGgatataggagttaaaaagaaattacttaagcagatagtgaaggtacggaagtcctcggtaaagattttctgttttaatgaaa---agtcccaaagtcactttctaagaa
i Cebuella_pygmaea.k141_1309012                          C 0 I 1
s Cebus_albifrons.Contig27                                25650769 119 +  26074798 TAGTCCT-CTTGTGgatataggagttaaaaagaaattatttaagcagatagtgaaggtacagaagtcctcggtaaagattttccattttaatgaaa---agtcccaaagtcactttctaagaa
i Cebus_albifrons.Contig27                               C 0 I 1
s Cebus_olivaceus.k141_398305                                  346 119 +      1777 TAGTCCT-CTTGTGgatataggagttaaaaagaaattatttaagcagatagtgaaggtacagaagtcctcggtaaagattttccattttaatgaaa---agtcccaaagtcactttctaagaa
i Cebus_olivaceus.k141_398305                            C 0 I 1
s Cebus_unicolor.k141_544048                                 48677 119 -     74725 TAGTCCT-CTTGTGgatataggagttaaaaagaaattatttaagcagatagtgaaggtacagaagtcctcggtaaagattttccattttaatgaaa---agtcccaaagtcactttctaagaa
i Cebus_unicolor.k141_544048                             C 0 I 1
s Cephalopachus_bancanus.k141_1423433                         4743   8 +     31688 TAATTCT-G------------------------------------------------------------------------------------------------------------------
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12230737   8 +  27778364 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1764   8 -     25243 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4474291 122 +   4669795 TAGTCCT-GTTGTTGATACAGGAGCTAAAAAGAAGTTACTTAAGCAGATAGCGAGGGTACAGAAGGACTCGGTaaaggttttcctttttaatgaaaaggaGTCCCAAAGTCACTTTCTAAGAA
i Cercocebus_atys.KQ010504.1                             C 0 I 1
s Cercocebus_chrysogaster.k141_393940                        12840 122 -     19203 TAGTCCT-GTTGTtgatacaggagctaaaaagaagttacttaagcagatagcgagggtacagaaggactcggtaaaggttttcctttttaatgaaaaggagtcccaaagtcactttctaagaa
i Cercocebus_chrysogaster.k141_393940                    C 0 I 1
s Cercocebus_lunulatus.k141_3846941                           7262 122 +      8260 TAGTCCT-GTTGTtgatacaggagctaaaaagaagttacttaagcagatagcgagggtacagaaggactcggtaaaggttttcctttttaatgaaaaggagtcccaaagtcactttctaagaa
i Cercocebus_lunulatus.k141_3846941                      C 0 I 1
s Cercocebus_torquatus.k141_3057011                           7488 122 +     27781 TAGTCCT-GTTGTtgatacaggagctaaaaagaagttacttaagcagatagcgagggtacagaaggactcggtaaaggttttcctttttaatgaaaaggagtcccaaagtcactttctaagaa
i Cercocebus_torquatus.k141_3057011                      C 0 I 1
s Cercopithecus_ascanius.k141_1024104                         7648 122 -     20310 TAGTTCT-GTTGTtgatataggagctaaaaagaagttacttaagtagatagcgagggtacagaagtactcggtaaaggttttcctttttaatgaaaaggagtcccaaagtcactctctaagaa
i Cercopithecus_ascanius.k141_1024104                    C 0 I 1
s Cercopithecus_cephus.k141_1078548                          10627 122 +     29689 TAGTTCT-GTTGTtgatataggagctaaaaagaagttacttaagtagatagcgagggtacagaagtactcggtaaaggttttcctttttaatgaaaaggagtcccaaagtcactctctaagaa
i Cercopithecus_cephus.k141_1078548                      C 0 I 1
s Cercopithecus_diana.k141_2427854                            5058 122 +      9989 TAGTCCT-GTTGTtgatacaggagctaaaaagaagttacttaagcagatagcgagggtacagaagtactcggtaaaggttttcctttttaatgaaaaggagtcccgaagtcactctctaagaa
i Cercopithecus_diana.k141_2427854                       C 0 I 1
s Cercopithecus_hamlyni.k141_187466                          13306 122 -     27936 TAGTTCT-GTTGTtgatataggagctaaaaagaagttacttaagcagatagcgagggtacagaagtactcggtaaaggttttcctttttaatgaaaaggagtcctaaagtcactctctaagaa
i Cercopithecus_hamlyni.k141_187466                      C 0 I 1
s Cercopithecus_lowei.k141_1854285                            2172 122 -     17152 TAGTCCT-GTTGTtgatacaggagctaaaaagaagttacttaagcagatagcgagggtacagaagtactcggtaaaggttttcctttttaatgaaaaggagtcccaaagtcactttctaagaa
i Cercopithecus_lowei.k141_1854285                       C 0 I 1
s Cercopithecus_albogularis.ctg5                                38815710 122 +  39242232 TAGTTCT-GTTGTtgatataggagctaaaaagaagttacttaagtagatagcgagggtacagaagtactcggtaaaggttttcctttttaatgaaaaggagtcccaaagtcactctctaagaa
i Cercopithecus_albogularis.ctg5                               C 0 I 1
s Cercopithecus_mona.ctg39                                21221401 122 -  21565898 TAGTCCT-GTTGTtgatacaggagctaaaaagaagttacttaagcagatagcgagggtacagaagtactcggtaaaggttttcctttttaatgaaaaggagtcccaaagtcactttctaagaa
i Cercopithecus_mona.ctg39                               C 0 I 1
s Cercopithecus_neglectus.k141_2526306                       38519 122 -     53127 TAGTCCT-GTTGTtgatacaggagctaaaacgaagttacttaagcagatagcgagggtacagaagtactcggtaaaggttttcctttttaatgaaaaggagtcccaaagtcactttctaagaa
i Cercopithecus_neglectus.k141_2526306                   C 0 I 1
s Cercopithecus_nictitans.k141_3278028                        5790 122 +      7159 TAGTTCT-GTTGTtgatataggagctaaaaagaagttacttaagtagatagcgagggtacagaagtactcggtaaaggttttcctttttaatgcaaaggagtcccaaagtcactctctaagaa
i Cercopithecus_nictitans.k141_3278028                   C 0 I 1
s Cercopithecus_petaurista.k141_807961                       13322 122 -     27947 TAGTCCT-GTTGTtgatacaggagctaaaaagaagttacttaagcagatagcgagggtacagaagtactcggtaaaggttttcctttttaatgaaaaggagtcccaaagtcactttctaagaa
i Cercopithecus_petaurista.k141_807961                   C 0 I 1
s Cercopithecus_pogonias.k141_822820                         13295 122 +     17596 TAGTCCT-GTTGTtgatacaggagctaaaaagaagttacttaagcagatagcgagggtacagaagtactcggtaaaggttttcctttttaatgaaaaggagtcccaaagtcactttctaagaa
i Cercopithecus_pogonias.k141_822820                     C 0 I 1
s Cercopithecus_roloway.k141_2567858                          2529 122 +     26000 TAGTCCT-GTTGTtgatacaggagctaaaaagaagttacttaagcagatagcgagggtacagaagtactcggtaaaggttttcctttttaatgaaaaggagtcccaaagtcactctctaagaa
i Cercopithecus_roloway.k141_2567858                     C 0 I 1
s Cheirogaleus_major.k141_333249                             20479   8 -     52598 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           15846   8 +     57038 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                           9922 119 +     11226 TAGTCCT-GTTGCGgatataggagttaaaaagaaattacttaagcagacagtgaaggtacagaagtcctcggcaaagattttccattttaatgaaa---agtcccaaagtcactttctaagaa
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18427279 122 -  18827391 TAGTCCT-GTTGTtgatacaggagctaaaaagaagttacttaagcagatagcgagggtacagaagtactcagtaaaggttttcctttttaatgaaaaggagtcccaaagtcactttctaagaa
i Chlorocebus_aethiops.ctg25                             C 0 I 1
s Chlorocebus_pygerythrus.k141_1025673                       13716 122 -     50209 TAGTCCT-GTTGTtgatacaggagctaaaaagaagttacttaagcagatagcgagggtacagaagtactcaataaaggttttcctttttaatgaaaaggagtcccaaagtcactctctaagaa
i Chlorocebus_pygerythrus.k141_1025673                   C 0 I 1
s Chlorocebus_sabaeus.CM001947.1                         135420716 122 + 135778131 TAGTCCT-GTTGTTGATACAGGAGCTAAAAAGAAGTTACTTAAGCAGATAGCGAGGGTACAGAAGTACTCAGTaaaggttttcctttttaatgaaaaggaGTCCCAAAGTCACTTTCTAAGAA
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 1
s Choloepus_didactylus.ChoDid_scaffold_45914                 17161   8 +     19366 TAATCAT-G------------------------------------------------------------------------------------------------------------------
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            172261   8 +    839153 TAATCAT-G------------------------------------------------------------------------------------------------------------------
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1909229 122 +   2368649 TAGTCCT-GTTGttgatataggagttaaaaagaaGTTACTTACGCAGATAGTGAGGGCACAGAAGTACTTGGtaaaggttttccttttttatgaaaAGGAGTCCCAAAATCACTTTCTAAGAA
i Colobus_angolensis.KN981557.1                          C 0 I 1
s Colobus_guereza.LG01                                   199948907  51 + 200372422 TAGTCCT-GTTGTTGATATAGGAGTTAAAAAGAAGTC-CTGTTGTTGATATAG----------------------------------------------------------------------
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              35767 122 +     84244 TAGTCCT-GTTGTtgatataggagttaaaaagaagttacttacgcagatagtgagggcacagaagtacttggtaaaggttttccttttttatgaaaaggagtcccaaaatcactttctaagaa
i Colobus_polykomos.k141_906115                          C 0 I 1
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          13608   8 -     20389 AAATCCA-G------------------------------------------------------------------------------------------------------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 49449   5 +     63868 TAAGC----------------------------------------------------------------------------------------------------------------------
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 3
s Cricetulus_griseus.LT883664.1                           11666927   5 + 224834208 TAAGC----------------------------------------------------------------------------------------------------------------------
i Cricetulus_griseus.LT883664.1                          C 0 I 3
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27775   8 -     87169 TAATCTT-G------------------------------------------------------------------------------------------------------------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    836505   5 +   1526836 CAACT----------------------------------------------------------------------------------------------------------------------
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12536709   8 -  12879189 TAGTCCT-G------------------------------------------------------------------------------------------------------------------
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8629162   8 +  20541912 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672587   8 +   1390856 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    5340   8 +    198055 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE759718.1                                   9818   8 +     11740 TCATCCT-g------------------------------------------------------------------------------------------------------------------
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1090628   8 +  10337057 tgctctt-g------------------------------------------------------------------------------------------------------------------
i Elephantulus_edwardii.JH947257.1                       I 1162 C 0
s Ellobius_lutescens.LOEQ01008920.1                          90420   5 +    110024 TAAGC----------------------------------------------------------------------------------------------------------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 3
s Ellobius_talpinus.LOJH01109367.1                             602   5 +      6299 TAAGC----------------------------------------------------------------------------------------------------------------------
i Ellobius_talpinus.LOJH01109367.1                       C 0 I 3
s Enhydra_lutris.KZ291758.1                               16328608   8 -  41312741 TAATCTT-G------------------------------------------------------------------------------------------------------------------
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144742   8 -  14770903 TAATCTG-G------------------------------------------------------------------------------------------------------------------
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1282650   8 +   4378816 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18530471   8 -  39960074 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               32486   8 +    498745 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21203887 122 -  21539334 TAGTCCT-GTTGTtgatataggagttaaaaagcaattacttaagcagatagcgagggtacagaagtactcggtaaaggttttcctttttaatgaaaaggagtcccaaagtcactctctaagaa
i Erythrocebus_patas.Contig38                            C 0 I 1
s Eulemur_albifrons.k141_342033                              13197   8 -     14127 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                5896   8 -     16928 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              14924   8 -     25546 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12124   8 +     26330 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 13363   8 +     23973 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12124   8 +     75513 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10060   8 +     97555 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            12980   8 +     26496 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  3598   8 -     17153 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13173   8 +    111500 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20236277   8 + 206538554 TTATCTT-G------------------------------------------------------------------------------------------------------------------
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195120   8 + 205367284 TTATCTT-G------------------------------------------------------------------------------------------------------------------
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  8634   8 -     36744 TTATCTT-G------------------------------------------------------------------------------------------------------------------
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     425652   8 -    453645 TAATCCC-A------------------------------------------------------------------------------------------------------------------
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             3359   8 +     11339 TAATCCC-A------------------------------------------------------------------------------------------------------------------
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                             662   8 +     41679 TAATCCC-A------------------------------------------------------------------------------------------------------------------
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840                479   8 -      9135 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              14672 122 -     32273 TAGTCCT-GTTGTtgatataggagttaaaaagaaattacttgagcagatagtgagggtacgaaagtgctcagtaaaggttttcttttttagtgaaaaggaggcccaaagtcactttctaagaa
i Gorilla_beringei.k141_3596273                          C 0 I 1
s Gorilla_gorilla.LT578336.1                              33186279 122 -  33314783 TAGTCCT-GTTgttgatataggagttaaaaagaaattacttgagcagatagtgagggtacgaaagtgctcagtaaaggttttcttttttagtgaaaaggaggcccaaagtcactttctaagaa
i Gorilla_gorilla.LT578336.1                             I 374 I 1421
s Hapalemur_alaotrensis.k141_170648                           6253   8 -     19426 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             11402   8 -     15286 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13041   8 +     18253 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13142   8 -     41752 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         12980   8 -     16460 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               241610   8 +    327341 TAATCTT-G------------------------------------------------------------------------------------------------------------------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_596025                  44   9 +       452 taccctgaa------------------------------------------------------------------------------------------------------------------
i Heterohyrax_brucei.HetBruBak_scaffold_596025           I 2 I 8
s Hoolock_leuconedys.ctg274                                    433487 121 +    630532 TAGTCCT-GTTGTtgatataggagttaaaaagaaattatttgagcagatagtgagggtacaaaagtgctcgttaa-ggttttcctttttaatgaaaaggagccctaaagtcactttctaagaa
i Hoolock_leuconedys.ctg274                                 C 0 I 1
s Hyaena_hyaena.HyaHya_flattened_line_26932                  43770   8 +     55795 TAATCTG-G------------------------------------------------------------------------------------------------------------------
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_232023                                1253 121 -     12752 TAGTCCT-GTTGTtgatataggagttaaaaagaaattacttgagcagatagtgagggtacaaaagtgctcgttaa-ggttttccttcttaatgaaaaggagccctaaagtcactttctaagaa
i Hylobates_agilis.k141_232023                           C 0 I 1
s Hylobates_klossii.k141_240831                               1297 121 +     14092 TAGTCCT-GTTGTtgatataggagttaaaaagaaattacttgagcagatagtgagggtacaaaagtgctcgttaa-ggttttccttcttaatgaaaaggagccctaaagtcactttctaagaa
i Hylobates_klossii.k141_240831                          C 0 I 1
s Hylobates_pileatus_b.LG02                                     189542080 121 - 191637585 TAGTCCT-GTTGTtgatataggagttaaaaagaaattacttgagcagatagtgagggtacaaaagtgctcgttaa-ggttttccttcttaatgaaaaggagccctaaagtcactttctaagaa
i Hylobates_pileatus_b.LG02                                     C 0 I 1
s Hylobates_pileatus_a.tarseq_633                            3334974 121 -  11177569 TAGTCCT-GTTGTtgatataggagttaaaaagaaattacttgagcagatagtgagggtacaaaagtgctcgttaa-ggttttccttcttaatgaaaaggagccctaaagtcactttctaagaa
i Hylobates_pileatus_a.tarseq_633                          C 0 I 1
s Ictidomys_tridecemlineatus.JH393364.1                    7519299   5 -   7955117 gaaaa----------------------------------------------------------------------------------------------------------------------
i Ictidomys_tridecemlineatus.JH393364.1                  I 36 I 37
s Indri_indri.k141_3655594                                   21937   8 +     31101 TAATCGT-G------------------------------------------------------------------------------------------------------------------
i Indri_indri.k141_3655594                               C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    13151   8 -     42476 TAATCTG-G------------------------------------------------------------------------------------------------------------------
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15523485   8 -  30322482 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        6276 119 +     64341 TAGTCCT-GTTGCGgatataggagttaaaaagaaattacttaagcagacagtgaaggtacagaagtcctcggcaaagattttccattttaatgaaa---agtcccaaagtcactttctaagaa
i Leontocebus_fuscicollis.k141_1820339                   C 0 I 1
s Leontocebus_illigeri.k141_3350179                           3603 119 +      4941 TAGTCCT-GTTGCGgatagaggagttaaaaagaaattacttaagcagacagtgaaggtacagaagtcctcggcaaagattttccattttaatgaaa---agtcccaaagtcactttctaagaa
i Leontocebus_illigeri.k141_3350179                      C 0 I 1
s Leontocebus_nigricollis.k141_4610752                        6319 119 +     35603 TAGTCCT-GTTGCGgatagaggagttaaaaagaaattacttaagcagacagtgaaggtacagaagtcctcggcaaagattttccattttaatgaaa---agtcccaaagtcactttctaagaa
i Leontocebus_nigricollis.k141_4610752                   C 0 I 1
s Leontopithecus_chrysomelas.k141_1519602                    27796 119 +     38576 TAGTCCT-GTTGTGgatataggagttaaaaagaaattacttaagcagatagtgaaggtacagaagtcctcagtaaagattttccattttaatgaaa---agttccaaagtcactttctaagaa
i Leontopithecus_chrysomelas.k141_1519602                C 0 I 1
s Leontopithecus_rosalia.k141_464620                         24493 119 +     66356 TAGTCCT-GTTGTGgatattggagttaaaaagaaattacttaagcagatagtgaaggtacagaagtcctcggtaaagattttccgttttaatgaaa---agttccaaagtcactttctaagaa
i Leontopithecus_rosalia.k141_464620                     C 0 I 1
s Lepilemur_ankaranensis.k141_596936                         10369   8 -     23766 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             28435   8 +     45836 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                           980   8 +     25010 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      26371   8 +     54090 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3042147   8 +   3914936 TAATCTT-G------------------------------------------------------------------------------------------------------------------
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                              1435838 122 +   1826925 TAATCCT-GTTGTtgatacaggagctaaaaagaagttacttaagcagatagcgagggtacagaaggactcggtaaaggttttcctttttaatgaaaaggagtcccaaagtcactttctaagaa
i Lophocebus_aterrimus.ctg367                            C 0 I 1
s Loris_lydekkerianus.k141_2539221                            5038   8 +     11245 TAATCCC-A------------------------------------------------------------------------------------------------------------------
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1003888   8 +   6120653 TAATCCC-A------------------------------------------------------------------------------------------------------------------
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4216393   9 -  43346337 tactcagaa------------------------------------------------------------------------------------------------------------------
i Loxodonta_africana.GL010049.1                          I 2 C 0
s Lycaon_pictus.CM007581.1                                17954424   8 -  59628241 TAATGTT-G------------------------------------------------------------------------------------------------------------------
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               5652 122 +     40492 TAGTCCT-GTTGTtgatagaggagttaaaaagcaattacttaagcagatagcgagggtacagaaggactcggtaaaggttttcctttttaatgaaaaggagtcccaaagtcactttctaagaa
i Macaca_arctoides.k141_2326796                          C 0 I 1
s Macaca_assamensis.Contig5                               59674915 121 +  60120075 TAGTCCT-GTTGTtgatagaggagttaaaaagcaattacttaagcagatagcgagggtacagaaggactcggtaaaggttttcct-tttaatgaaaaggagtcccaaagtcactttctaagaa
i Macaca_assamensis.Contig5                              C 0 I 1
s Macaca_cyclopis.k119_18836                                 11430 122 -     26193 TAGTCCT-GTTGTtgatagaggagttaaaaagcaattacttaagcagatagcgagggtacagaaggactcggtaaaggttttcctttttaatgaaaaggagtcccaaagtcactttctaagaa
i Macaca_cyclopis.k119_18836                             C 0 I 1
s Macaca_fascicularis.k141_814140                            79213 122 -    114318 TAGTCCT-GTTGTtgacagaggagttaaaaagcaattacttaagcagatagcgagggtacagaaggactcggtaaaggttttcctttttaatgaaaaggagtcccaaagtcactttctaagaa
i Macaca_fascicularis.k141_814140                        C 0 I 1
s Macaca_fuscata.k119_255327                                  4910 122 -     23192 TAGTCCT-GTTGTtgatagaggagttaaaaagcaattacttaagcagatagcgagggtacagaaggactcggtaaaggttttcctttttaatgaaaaggagtcccaaagtcactttctaagaa
i Macaca_fuscata.k119_255327                             C 0 I 1
s Macaca_leonina.k141_3550399                                14372 122 -     29190 TAGTCCT-GTTGTtgatagaggagttaaaaagcaattacttaagcagatagcgagggtacagaaggactcggtaaaggttttcctttttaatgaaaaggagtcccaaagtcactttctaagaa
i Macaca_leonina.k141_3550399                            C 0 I 1
s Macaca_maura.k141_2733130                                  22937 122 +     37952 TAGTCCT-GTTGTtgatagaggagttaaaaagcaattacttaagcagatagcgagggtacagaaggactcggtaaaggttttcctttttaatgaaaaggagtcccaaagtcactttctaagaa
i Macaca_maura.k141_2733130                              C 0 I 1
s Macaca_mulatta.NC_041758.1                             186838028 122 + 187317192 TAGTCCT-GTTGTTGATAGAGGAGTTAAAAAGCAATTACTTAAGCAGACAGCGAGGGTACAGAAGGACTCGGTaaaggttttcctttttaatgaaaaggAGTCCCAAAGTCACTTTCTAAGAA
i Macaca_mulatta.NC_041758.1                             C 0 I 1
s Macaca_nemestrina.KQ007038.1                            25456589 122 -  25927173 TAGTCCT-GTTGTTGATAGAGGAGTTAAAAAGCAATTACTTAAGCAGATAGCGAGGGTACAGAAGGACTCGGTaaaggttttcctttttaatgaaaaggaGTCCCAAAGTCACTTTCTAAGAA
i Macaca_nemestrina.KQ007038.1                           C 0 I 1
s Macaca_nigra.k141_1655396                                  78788 122 +     89720 TAGTCCT-GTTGTtgacagaggagttaaaaagcaattacttaagcagatagcgagggtacagaaggactcggtaaaggttttcctttttaatgaaaaggagtcccaaagtcactttctaagaa
i Macaca_nigra.k141_1655396                              C 0 I 1
s Macaca_radiata.k141_3680011                                 5786 122 +     20474 TAGTCCT-GTTGTtgatagaggagttaaaaagcaattacttaagcagatagcgagggtacagaaggactcggtaaaggttttcctttttaatgaaaaggagtcccaaagtcactttctaagaa
i Macaca_radiata.k141_3680011                            C 0 I 1
s Macaca_siberu.k141_635500                                   5586 122 -     14993 TAGTCCT-GTTGTtgatagaggagttaaaaagcaattacttaagcagatagcgagggtacagaaggactcggtaaaggttttcctttttaatgaaaaggagtcccaaagtcactttctaagaa
i Macaca_siberu.k141_635500                              C 0 I 1
s Macaca_silenus.Contig273                                  328457 122 -    668171 TAGTCCT-GTTGTtgatagaggagttaaaaagcaattacttaagcagatagcgagggtacagaaggactcggtaaaggttttcctttttaatgaaaaggagtcccaaagtcactttctaagaa
i Macaca_silenus.Contig273                               C 0 I 1
s Macaca_thibetana.k99_256239                                 3898 122 -     24072 TAGTCCT-GTTGTtgatagaggagttaaaaagcaattacttaagcagatagcgagggtacagaaggactcggtaaaggttttcctctttaatgaaaaggagtcccaaagtcactttctaagaa
i Macaca_thibetana.k99_256239                            C 0 I 1
s Macaca_tonkeana.k141_1498238                               24525 122 -     45290 TAGTCCT-GTTGTtgatagaggagttaaaaagcaattacttaagcagatagcgagggtacagaaggagtcggtaaaggttttcctttttaatgaaaaggagtcccaaagtcactttctaagaa
i Macaca_tonkeana.k141_1498238                           C 0 I 1
s Macroglossus_sobrinus.MacSob_scaffold_8222                 89903   8 +     94391 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23936111 122 -  24302211 TAATCCT-GTTGTtgatacaggagctaaaaagaagttacttaagcagatagcgagggtacagaaggacccggtaaaggttttcctttttaatgaaaaggagtcccaaagtcactttctaagaa
i Mandrillus_leucophaeus.scaffold280                     C 0 I 1
s Mandrillus_sphinx.Contig270                               350241 122 +    752769 TAATCCT-GTTGTtgatacaggagctaaaaagaagttacttaagcagatagcgagggtacagaaggacccggtaaaggttttcctttttaatgaaaaggagtcccaaagtcactttctaagaa
i Mandrillus_sphinx.Contig270                            C 0 I 1
s Marmota_marmota.CZRN01000018.1                          33101609   5 -  40650429 gaaaa----------------------------------------------------------------------------------------------------------------------
i Marmota_marmota.CZRN01000018.1                         I 36 I 35
s Megaderma_lyra.MegLyr_scaffold_4542                         9627   8 -    207569 CAATCCT-A------------------------------------------------------------------------------------------------------------------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 3
s Mellivora_capensis.MelCap_flattened_line_69365              9325   8 +     13704 TAATCTT-G------------------------------------------------------------------------------------------------------------------
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 32126   5 +    140813 TAAGC----------------------------------------------------------------------------------------------------------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 3
s Mesocricetus_auratus.KB708134.1                         12181609   5 -  29670104 TAAGC----------------------------------------------------------------------------------------------------------------------
i Mesocricetus_auratus.KB708134.1                        C 0 I 3
s Mico_argentatus.k141_1239457                                4560 119 -      7380 TAGTCCT-GCTGTGgatataggagttaaaaagaaattacttaagcagatagagaaggtacggaagtcctcggtaaagattttctgttttaatgaaa---agtcccaaagtcactttctaagaa
i Mico_argentatus.k141_1239457                           C 0 I 1
s Mico_humeralifer.k141_1976199                               3633 119 +     18990 TAGTCCT-GCTGTGgatataggagttaaaaagaaattacttaagcagatagagaaggtacagaagtcctcggtaaagattttctgttttaatgaaa---agtcccaaagtcactttctaagaa
i Mico_humeralifer.k141_1976199                          C 0 I 1
s Mico_schneideri.k141_1950671                                      4572 119 -      7356 TAGTCCT-GCTGTGgatataggagttaaaaagaaattacttaagcagatagagaaggtacggaagtcctcggtaaagattttctgttttaatgaaa---agtcccaaagtcactttctaagaa
i Mico_schneideri.k141_1950671                                 C 0 I 1
s Microcebus_murinus.CM007674.1                           18290885   8 -  93316391 CGATCCT-G------------------------------------------------------------------------------------------------------------------
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                14703   8 -     19307 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849934   8 +   8254450 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             33611   8 +     64694 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           7836 122 -     28506 TAGTCCT-GTTGTtgatacaggagctaaaaagaagttacttcagcagatagcgagggtacagaagtactcggtaaaggttttcctttttaatgaaaaggagtcccaaagtcactttctaagaa
i Miopithecus_ogouensis.k141_534055                      C 0 I 1
s Mirounga_angustirostris.MirAng_flattened_line_93702         5015   8 -      8324 TAATCTT-G------------------------------------------------------------------------------------------------------------------
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      8431   8 -     37649 CAATCCT-G------------------------------------------------------------------------------------------------------------------
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140649   8 -    366855 TAATCAT-G------------------------------------------------------------------------------------------------------------------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   34722   8 +     37127 TAATCTT-G------------------------------------------------------------------------------------------------------------------
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5806   8 +     14753 TAATCTA-G------------------------------------------------------------------------------------------------------------------
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84360730   5 - 120012414 TAAGC----------------------------------------------------------------------------------------------------------------------
i Mus_caroli.LT608237.1                                  C 0 I 3
s Mus_musculus.chr8                                       87649730   5 - 129401213 TAAGC----------------------------------------------------------------------------------------------------------------------
i Mus_musculus.chr8                                      C 0 I 3
s Mus_pahari.LT608297.1                                   31354386   5 -  89631738 TAAGC----------------------------------------------------------------------------------------------------------------------
i Mus_pahari.LT608297.1                                  C 0 I 3
s Mus_spretus.CM004101.1                                  90751791   5 - 130317789 TAAGC----------------------------------------------------------------------------------------------------------------------
i Mus_spretus.CM004101.1                                 C 0 I 3
s Mustela_putorius.JH418006.1                               300503   8 -  14710649 TAATCTT-G------------------------------------------------------------------------------------------------------------------
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                278979   8 -  10118263 TAATCTG-G------------------------------------------------------------------------------------------------------------------
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1586672   8 -   6019432 TAATCTG-G------------------------------------------------------------------------------------------------------------------
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902744   8 -   4330536 TAATCTG-G------------------------------------------------------------------------------------------------------------------
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        33299   8 +     33610 TAATCTG-G------------------------------------------------------------------------------------------------------------------
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              188081   8 +    196477 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2033214   5 -   3037898 TAATC----------------------------------------------------------------------------------------------------------------------
i Nannospalax_galili.KL204047.1                          C 0 I 3
s Nasalis_larvatus.k141_413338                               13831 118 +     21681 TAGTCCT-GTTGTtgatataggagttaaaaagaag----ttacgcagatagtgagggcacagaagtactcggtaaaggttgtcctttttcatgacaaggagtcccaaagtcactttctaagaa
i Nasalis_larvatus.k141_413338                           C 0 I 1
s Neomonachus_schauinslandi.NINY01007730.1                20306269   8 +  31847680 TAATCTT-G------------------------------------------------------------------------------------------------------------------
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9148678   8 -   9404916 taatatt-g------------------------------------------------------------------------------------------------------------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102578865   8 - 196305487 TAATCCC-A------------------------------------------------------------------------------------------------------------------
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_771082                               710   8 -      2667 TAATCCC-A------------------------------------------------------------------------------------------------------------------
i Nycticebus_coucang.k141_771082                         C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749286   8 + 199412804 TAATCTC-A------------------------------------------------------------------------------------------------------------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                              505954   8 -   2017862 TAATCTT-G------------------------------------------------------------------------------------------------------------------
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                    3600   5 -     28053 TATGC----------------------------------------------------------------------------------------------------------------------
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 3
s Onychomys_torridus.OnyTor_scaffold_2986                    79517   5 +    102263 TAACC----------------------------------------------------------------------------------------------------------------------
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 3
s Orycteropus_afer.OryAfe_flattened_line_144387               9099   9 -     18566 tactcttag------------------------------------------------------------------------------------------------------------------
i Orycteropus_afer.OryAfe_flattened_line_144387          I 79 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       461646   8 -    559221 TAATGTT-G------------------------------------------------------------------------------------------------------------------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         3184   8 +      8798 TAATCCC-A------------------------------------------------------------------------------------------------------------------
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             695348   8 -   1103335 TAATCCC-A------------------------------------------------------------------------------------------------------------------
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    42766 122 +     80009 TAGTCCT-GTTgttgatataggagttaaaaagaaattacttgaGCAGATAGTGAGGGTACAAAAGTGCTCggtaaaggttttcttttttagtgaaaAGGAGACCCAAAGTCACTTTCTAAGAA
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189141676 122 + 189151597 TAGTCCT-GTTgttgatataggagttaaaaagaaattacttgagcagatagtgagggtacaAAAGTGCTCggtaaaggttttcttttttagtgaaAAGGAGACCCAAAGTCACTTTCTAAGAA
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  150479   8 +    230217 TAATCTT-G------------------------------------------------------------------------------------------------------------------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                263685   8 +  18783137 TAATCTT-G------------------------------------------------------------------------------------------------------------------
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4720323   8 -   8748460 TAATCTT-G------------------------------------------------------------------------------------------------------------------
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183441865 122 + 183742232 TAATCCT-GTTGTTGATACAGGAGCTAAAAAGAAGTTACTTAAGCAGATAGCGAGGGTACAGAAGGACTCGGTaaaggttttcctttttaatgaaaaggaGTCCCAAAGTCACTTTCTAAGAA
i Papio_anubis.CM001495.2                                C 0 I 1
s Papio_cynocephalus.k141_4307930                             5559 122 +     20448 TAATCCT-GTTGTtgatacaggagctaaaaagaagttacttaagcagatagcgagggtacagaaggactcggtaaaggttttcctttttaatgaaaaggaggcccaaagtcactttctaagaa
i Papio_cynocephalus.k141_4307930                        C 0 I 1
s Papio_hamadryas.Contig39                                20562367 122 +  20919399 TAATCCT-GTTGTtgatacaggagctaaaaagaagttacttaagcagatagcgagggtacagaaggactcggtaaaggttttcctttttaatgaaaaggagtcccaaagtcactttctaagaa
i Papio_hamadryas.Contig39                               C 0 I 1
s Papio_kindae.k141_1936966                                   4303 122 +     41871 TAATCCT-GTTGTtgatacaggagctaaaaagaagttacttaagcagatagcgagggtacagaaggactcggtaaaggttttcctttttaatgaaaaggagtcccaaagtcactttctaagaa
i Papio_kindae.k141_1936966                              C 0 I 1
s Papio_papio.k141_802527                                     7588 122 +     27711 TAATCCT-GTTGTtgatacaggagctaaaaagaagttacttaagcagatagcgagggtacagaaggactcggtaaaggttttcctttttaatgaaaaggagtcccaaagtcactttctaagaa
i Papio_papio.k141_802527                                C 0 I 1
s Papio_ursinus.k141_3428135                                  7666 122 +      9205 TAATCCT-GTTGTtgatacaggagctaaaaagaagttacttaagcagatagcgagggtacagaaggactcggtaaaggttttcctttttaatgaaaaggagtcccaaagtcactttctaagaa
i Papio_ursinus.k141_3428135                             C 0 I 1
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11940   8 -     78924 TAATCTT-G------------------------------------------------------------------------------------------------------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            9333   8 +     13100 TAATCCC-A------------------------------------------------------------------------------------------------------------------
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             7735   8 +     25941 TAATCCC-A------------------------------------------------------------------------------------------------------------------
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18194138   5 -  18517816 TAATC----------------------------------------------------------------------------------------------------------------------
i Peromyscus_maniculatus.KI615324.1                      C 0 I 3
s Piliocolobus_badius.k141_1234363                           42327 122 +     62158 TAGTCCT-GTTGTtgatataggagttaaaaagaagttacttacgcagatagtgagggcacagaagtacttggtaagggttttcctttttcatgaaaaggagtcccaaagtcaccttctaagaa
i Piliocolobus_badius.k141_1234363                       C 0 I 1
s Piliocolobus_gordonorum.k141_381342                        37058 122 +     89929 TAGTCCT-GTTGTtgatataggagttaaaaagaagttacttacgcagatagtgagggcacagaagtactcggtaaaggttttcctttttcatgaaaaggagtcccaaagtcaccttctaagaa
i Piliocolobus_gordonorum.k141_381342                    C 0 I 1
s Piliocolobus_kirkii.k141_448987                            38474 122 +     51399 TAGTCCT-GTTGTtgatataggagttaaaaagaagttacttacgcagatagtgagggcacagaagtactcggtaaaggttttcctttttcatgaaaaggagtcccaaagtcaccttctaagaa
i Piliocolobus_kirkii.k141_448987                        C 0 I 1
s Piliocolobus_tephrosceles.PDMG02000141.1                14294712 122 -  14605196 TAGTCCT-GTTGttgatataggagttaaaaagaagTTACTTACACAGATAGTGAGGGCACAGAAGTACTTGGTAAaggttttcctttttcatgaaaaGGAGTCCCAAAGTCACCTTCTAAGAA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 1
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1136   8 +     22620 TAATCTG-G------------------------------------------------------------------------------------------------------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189129810 122 + 189387572 TAGTCCT-TTTgttgatataggagttaaaaagaaattacttgaGCAGATAGTGAGGGTACAAAAGTGCTCggtaaaggttttcttttttagtgaaAAGGAGCCCCAAAATCACTTTCTAAGAA
i Pongo_abelii.CM009266.2                                C 0 I 1
s Pongo_pygmaeus.ctg66                                     9569418 122 +   9816681 TAGTCCT-TTTGTtgatataggagttaaaaagaaattacttgagcagatagtgagggtacaaaagtgctcggtaaaggttttcttttttagtgaaaaggagccccaaaatcactttctaagaa
i Pongo_pygmaeus.ctg66                                   C 0 I 1
s Presbytis_comata.k141_677006                               71999 122 -     81375 TAGTCCT-GTTGTtgatataggagtcaaaaagaagttacttacgcagatagtgagggcacagaagtactcggtaaaggttttcctttttcatgaaaaggagtcccaaagtcactttctaagaa
i Presbytis_comata.k141_677006                           C 0 I 1
s Presbytis_mitrata.k141_1087752                              3819 122 +     19060 TAGTCCT-GTTGTtgatataggagtcaaaaagaagttacttacgcagatagtgagggcacagaagtactcggtaaaggttttcctttttcatgaaaaggagtcccaaagtcactttctaagaa
i Presbytis_mitrata.k141_1087752                         C 0 I 1
s Procavia_capensis.ProCapCap_scaffold_85530                 12243   9 -     22811 taccctgaa------------------------------------------------------------------------------------------------------------------
i Procavia_capensis.ProCapCap_scaffold_85530             I 2 I 8
s Prolemur_simus.MPIZ01000396.1                            2596163   8 -   4620579 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990133   8 +   2598838 CGATCCT-G------------------------------------------------------------------------------------------------------------------
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          28443   8 +     38485 CGATCCT-G------------------------------------------------------------------------------------------------------------------
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                               488   8 -     13098 CGATCCT-G------------------------------------------------------------------------------------------------------------------
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          25964   8 +     35766 CGATCCT-G------------------------------------------------------------------------------------------------------------------
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4152   8 -     24134 CGATCCT-G------------------------------------------------------------------------------------------------------------------
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        27974   8 -     67325 CGATCCT-G------------------------------------------------------------------------------------------------------------------
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4196   8 -      6182 CGATCCT-G------------------------------------------------------------------------------------------------------------------
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             9760   5 -     21651 TAAGC----------------------------------------------------------------------------------------------------------------------
i Psammomys_obesus.NESX01036370.1                        C 0 I 3
s Pteronotus_parnellii.KE909381.1                            13991   8 -     21811 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39525   8 +     42204 TAATCTT-G------------------------------------------------------------------------------------------------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22976074   8 +  28871421 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1359160   8 +   4952924 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20273633   8 -  38429054 TTATCTT-G------------------------------------------------------------------------------------------------------------------
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             13830 118 -     91421 TAGTCCT-GTTGTtgacataggagttaaaaagaag----ttacgcagatagtgagggcacagaagtactcggtaaaggttttcctttttcatgacaaggagtcccaaagtcactttctaagaa
i Pygathrix_cinerea.k141_1153803                         C 0 I 1
s Pygathrix_nigripes_b.ctg100                                 7607956 118 +   7812017 TAGTCCT-GTTGTtgacataggagttaaaaagaag----ttacgcagatagtgagggcacagaagtactcggtaaaggttttcctttttcatgacaaggagtcccaaagtcactttctaagaa
i Pygathrix_nigripes_b.ctg100                               C 0 I 1
s Pygathrix_nigripes_a.k141_215492                             13804 118 -     72585 TAGTCCT-GTTGTtgacataggagttaaaaagaag----ttacgcagatagtgagggcacagaagtactcggtaaaggttttcctttttcatgacaaggagtcccaaagtcactttctaagaa
i Pygathrix_nigripes_a.k141_215492                         C 0 I 1
s Rattus_norvegicus.chr16                                 53570004   5 +  90668790 TAAGC----------------------------------------------------------------------------------------------------------------------
i Rattus_norvegicus.chr16                                C 0 I 3
s Rhinopithecus_bieti.k119_217274                             5519 118 -     11128 TAGTCCT-GTTGTtgatacaggagttaaaaagaag----ttaggcagatagtgagggcacagaagtactcggtaaaggttttcctttttcatgacaaggagtcccaaagtcactttctaagaa
i Rhinopithecus_bieti.k119_217274                        C 0 I 1
s Rhinopithecus_roxellana.NC_044550.1                     91234879 118 - 195417433 TAGTCCT-GTTGTTGATACAGGAGTTAAAAAGAag----ttaggcagatagtgagggcacAGAAGTACTCggtaaaggttttcttttttcatgacaAGGAGTCCCAAAGTCACTTTCTAAGAA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 1
s Rhinopithecus_strykeri.ctg102                            7670524 118 +   7961872 TAGTCCT-GTTGTtgatacaggagttaaaaagaag----ttaggcagatagtgagggcacagaagtactcggtaaaggttttcctttttcatgacaaggagtcccaaagtcactttctaagaa
i Rhinopithecus_strykeri.ctg102                          C 0 I 1
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87092   8 -     96226 CAATCCT-G------------------------------------------------------------------------------------------------------------------
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               6985 119 -      8359 TAGTCCT-GTTGCGgatataggagttaaaaagaaattacttaagcagacagtgaaggtacagaagtcctcggcaaagattttccattttaatgaaa---agtcccaaagtcactttctaagaa
i Saguinus_bicolor.k141_2619299                          C 0 I 1
s Saguinus_imperator.k141_2524406                              926 119 +      2197 TAGTCCT-GTTGCGgatataggagttaaaaagaaattacttaagcagacagtgaaggtacagaagtcctcggcaaagattttccattttaatgaaa---agtcccaaagtcactttctaagaa
i Saguinus_imperator.k141_2524406                        C 0 I 1
s Saguinus_inustus.k141_699149                               12348 119 +     13640 TAGTCCT-GTTGCGgatataggagttaaaaagaaattacttaagcagacagtgaaggtacagaagtcctcggcaaaggttttccattttaatgaaa---agtcccaaagtcactttctaagaa
i Saguinus_inustus.k141_699149                           C 0 I 1
s Saguinus_labiatus.k141_285685                               7212 119 +      8564 TAGTCCT-GTTGCGgatataggagttaaaaagaaattacttaagcagacagtgaaggtacagaagtcctcggcaaaggttttccattttaatgaaa---agtcccaaagtcactttctaagaa
i Saguinus_labiatus.k141_285685                          C 0 I 1
s Saguinus_midas.LG03                                    209468060 119 + 209938924 TAGTCCT-GTTGCGgatataggagttaaaaagaaattacttaagcagacagtgaaggtacagaagtcctcggcaaagattttccattttaatgaaa---agtcccaaagtcactttctaagaa
i Saguinus_midas.LG03                                    C 0 I 1
s Saguinus_mystax.k141_374627                                 6774 119 -      9399 TAGTCCT-GTTGCGgatataggagttaaaaagaaattacttaagcagacactgaaggtacagaagtcctcggcaaaggttttccattttaatgaaa---agtcccaaagtcactttctaagaa
i Saguinus_mystax.k141_374627                            C 0 I 1
s Saimiri_boliviensis.NW_024100920.1                     119950080 119 - 121099817 TAGTCCT-GTTGTGGATATAGGCGTTAAAAAGAAAGTACTTAAGCAAATAGTGAAGGTACAGAAGTCCTCAGGAAAGATTTTCCGTTTTAACGAAA---TGTCCCAAAGTCACTTTCTAAGAA
i Saimiri_boliviensis.NW_024100920.1                     C 0 I 1
s Saimiri_cassiquiarensis.k141_2188234                       22536 119 +     46362 TAGTCCT-GTTGTGgatataggcgttaaaaagaaagtacttaagcaaatagtgaaggtacagaagtcctcaggaaagattttccgttttaacgaaa---tgtcccaaagtcactttctaagaa
i Saimiri_cassiquiarensis.k141_2188234                   C 0 I 1
s Saimiri_macrodon.k141_716185                               22631 119 +     45824 TAGTCCT-GTTGTGgatataggtgttaaaaagaaagtacttaagcaaatagtgaaggtacagaagtcctcaggaaagattttccgttttaacgaaa---tgtcccaaagtcactttctaagaa
i Saimiri_macrodon.k141_716185                           C 0 I 1
s Saimiri_oerstedii.k141_1487881                             39259 119 -     64574 TAGTCCT-GTTGTGgatataggcgttaaaaagaaagtacttaagcaaatagtgaaggtacagaagtcctcaggaaagattttccgttttaacgaaa---tgtcccaaagtcactttctaagaa
i Saimiri_oerstedii.k141_1487881                         C 0 I 1
s Saimiri_sciureus.k141_2278166                               2265 119 -     23631 TAGTCCT-GTTGTGgatataggcgttaaaaagaaagtacttaagcaaatagtgaaggtacagaagtcctcaggaaagattttccgttttaacgaaa---tgtcccaaagtcactttctaagaa
i Saimiri_sciureus.k141_2278166                          C 0 I 1
s Saimiri_ustus.k141_1484609                                 22524 119 -     61129 TAGTCCT-GTTGTGgatataggcgttaaaaagaaagtacttaagcaaatagtgaaggtacagaagtcctcaggaaagattttccgttttaacgaaa---tgtcccaaagtcactttctaagaa
i Saimiri_ustus.k141_1484609                             C 0 I 1
s Sapajus_apella.ctg103                                    5419433 119 -   5703754 TAGTCCT-GTTGTGgatataggagttaaaaagaaattatttaagcagatagtgaaggtacagaagtcctcggtaaagattttccgttttaatgaaa---agtcccaaagtcactttctaagaa
i Sapajus_apella.ctg103                                  C 0 I 1
s Sapajus_macrocephalus.k141_351809                          54474 119 -     80660 TAGTCCT-GTTGTGgatataggagttaaaaagaaattatttaagcagatagtgaaggtacagaagtcctcggtaaagattttccgttttaatgaaa---agtcccaaagtcactttctaagaa
i Sapajus_macrocephalus.k141_351809                      C 0 I 1
s Semnopithecus_entellus.k141_11662                          18336 122 -     19888 TAGTCCT-GTTGTtgatataggagttaaaaaggagttacttatgcagatagtgagggcacagaagtactcggtaaaggttttcctttttcatgaaaaggagtcccaaagtcactttctaagaa
i Semnopithecus_entellus.k141_11662                      C 0 I 1
s Semnopithecus_hypoleucos.k141_1615806                      25539 122 +     39453 TAATCCT-GTTGTtgatataggagttaaaaaggagttacttacgcagatagtgagggcacagaagtactcggtaaaggttttcctttttcatgaaaaggagtcccaaagtcactttctaagaa
i Semnopithecus_hypoleucos.k141_1615806                  C 0 I 1
s Semnopithecus_johnii.k141_670120                            6058 122 +     27826 TAGTCCT-GTTGTtgatataggagttaaaaaggagttacttacgcagatagtgagggcacagaagtactcggtaaaggttttcctttttcatgaaaaggagtcccaaagtcactttctaagaa
i Semnopithecus_johnii.k141_670120                       C 0 I 1
s Semnopithecus_priam.k141_638794                             5578 122 -     19483 TAGTCCT-GTTGTtgatataggagttaaaaaggagttacttacgcagatagtgagggcacagaagtactcggtaaaggttttcctttttcatgaaaaggagtcccaaagtcactttctaagaa
i Semnopithecus_priam.k141_638794                        C 0 I 1
s Semnopithecus_schistaceus.k141_1584426                      5647 122 +      7198 TAGTCCT-GTTGTtgatataggagttaaaaaggagttacttatgcagatagtgagggcacagaagtactcggtaaaggttttcctttttcatgaaaaggagtcccaaagtcactttctaagaa
i Semnopithecus_schistaceus.k141_1584426                 C 0 I 1
s Semnopithecus_vetulus.k141_1200928                         13905 122 +     15514 TAGTCCT-GTTGTtgatataggagttaaaaaggagttacttacgcagatagtgagggcacagaagtactcggtaaaggttttcctttttcatgaaaaggagtcccaaagtcactttctaagaa
i Semnopithecus_vetulus.k141_1200928                     C 0 I 1
s Solenodon_paradoxus.SolPar_flattened_line_126               3057   8 +   1910179 TAATCCT-T------------------------------------------------------------------------------------------------------------------
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1952496   5 -   3870691 gaaaa----------------------------------------------------------------------------------------------------------------------
i Spermophilus_dauricus.KZ294078.1                       I 36 I 34
s Spilogale_gracilis.SpiGra_flattened_line_13525             30027   8 +     97271 TATCTTG-G------------------------------------------------------------------------------------------------------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              17611   8 -    196729 TAATCTT-G------------------------------------------------------------------------------------------------------------------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6809796   7 +  69701581 TAATCCT--------------------------------------------------------------------------------------------------------------------
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1092122 121 -   1523678 TAGTCCT-GTTGTtgatataggagttaaaaagaaattacttgagcagatagtgaggggacaaaagtgctcgttaa-ggttttccttcttaacgaaaaggagccctaaagtcactttctaagaa
i Symphalangus_syndactylus.tarseq_199                    C 0 I 1
s Tadarida_brasiliensis.TadBra_scaffold_25820                 9903   8 +     41958 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 71436   8 +    116680 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118061   8 -    156842 CAATCCT-G------------------------------------------------------------------------------------------------------------------
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    386514   8 +    539355 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               25736   8 +     70052 TAATTCT-G------------------------------------------------------------------------------------------------------------------
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                 571   8 -     16117 TAATTCT-G------------------------------------------------------------------------------------------------------------------
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186427231 122 + 186847797 TAATCCT-GTTGTTGATACAGGAGCTAAAAAGAAGTTACTTAAGCAGATAGCGAGGGTACAGAAGGACTCGGTaaaggttttcctttttaatgaaaaggaGTCCCAAAGTCACTTTCTAAGAA
i Theropithecus_gelada.CM009954.1                        C 0 I 1
s Tonatia_saurophila.TonSau_scaffold_294                     80233   8 +    610378 TAGTCCT-G------------------------------------------------------------------------------------------------------------------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                          9630 122 -     20410 TAGTCCT-GTTGTtgatataggagttaaaaaggagttacttacgcagatagtgagggcacagaagtactcggtaaaggttttcctttttcatgaaaaggagtcccaaagtcactttctaagaa
i Trachypithecus_auratus.k141_722599                     C 0 I 1
s Trachypithecus_crepusculus.k141_1194022                    13826 122 +     15221 TAGTCCT-GTTGTtgatataggagttaaaaaggagttacttacgcagatagtgagggcacagaagtactcggtaaaggttttcctttttcatgaaaaggagtcccaaagtcactttctaagaa
i Trachypithecus_crepusculus.k141_1194022                C 0 I 1
s Trachypithecus_cristatus.k141_580354                        9731 122 +     19930 TAGTCCT-GTTGTtgatataggagttaaaaaggagttacttacgcagatagtgagggcacagaagtactcggtaaaggttttcctttttcgtgaaaaggagtcccaaagtcactttctaagaa
i Trachypithecus_cristatus.k141_580354                   C 0 I 1
s Trachypithecus_francoisi.k141_1412647                       6158 122 -     19997 TAGTCCT-GTTGTtgatataggagttaaaaaggagttacttacgcagatagtgagggcacagaagtactcggtaaaggttttcctttttcatgaaaaggagtcccaaagtcactttctaagaa
i Trachypithecus_francoisi.k141_1412647                  C 0 I 1
s Trachypithecus_geei.k141_277701                            46287 122 -     60166 TAGTCCT-GTTGTtgatataggagttaaaaaggagttacttacgcagatagtgagggcacagaagtactcggtaaaggttttcctttttcatgaaaaggagtcccaaagtcactttctaagaa
i Trachypithecus_geei.k141_277701                        C 0 I 1
s Trachypithecus_germaini.k141_912491                        13753 122 -     27529 TAGTCCT-GTTGTtggtataggagttaaaaaggagttacttacgcagatagtgagggcacagaagtactcggtaaaggttttcctttttcatgaaaaggagtcccaaagtcactttctaagaa
i Trachypithecus_germaini.k141_912491                    C 0 I 1
s Trachypithecus_hatinhensis.k141_143409                     13697 122 -     18194 TAGTCCT-GTTGTtgatataggagttaaaaaggagttacttacgcagatagtgagggcacagaagtactcggtaaaggttttcctttttcatgaaaaggagtcccaaagtcactttctaagaa
i Trachypithecus_hatinhensis.k141_143409                 C 0 I 1
s Trachypithecus_laotum.k141_907409                           7425 122 -     21137 TAGTCCT-GTTGTtgatataggagttaaaaaggagttacttacgcagatagtgagggcacagaagtactcggtaaaggttttcctttttcatgaaaaggagtcccaaagtcactttctaagaa
i Trachypithecus_laotum.k141_907409                      C 0 I 1
s Trachypithecus_leucocephalus.k141_587342                    6128 122 -     10723 TAGTCCT-GTTGTtgatataggagttaaaaaggagttacttacgcagatagtgagggcacagaagtactcggtaaaggttttcctttttcatgaaaaggagtcccaaagtcactttctaagaa
i Trachypithecus_leucocephalus.k141_587342               C 0 I 1
s Trachypithecus_melamera.k141_434728                         5284 122 +      9834 TAGTCCT-GTTGTtgatataggagttaaaaaggagttacttacgcagatagtgagggcacagaagtactcggtaaaggttttcctttttcatgaaaaggagtcccaaagtcactttctaagaa
i Trachypithecus_melamera.k141_434728                    C 0 I 1
s Trachypithecus_obscurus.k141_190785                        23597 122 +     32220 TAGTCCT-GTTGTtgatataggagttaaaaaggagttacttacgcagatagtgagggcacagaagtactcggtaaaggttttcctttttcatgaaaaggagtcccaaagtcactttctaagaa
i Trachypithecus_obscurus.k141_190785                    C 0 I 1
s Trachypithecus_phayrei.ctg124                            5937699 122 +   6242583 TAGTCCT-GTTGTtgatataggagttaaaaaggagttacttacgcagatagtgagggcacagaagtactcggtaaaggttttcctttttcatgaaaaggagtcccaaagtcactttctaagaa
i Trachypithecus_phayrei.ctg124                          C 0 I 1
s Trachypithecus_pileatus.k141_2007326                        6952 122 +     20839 TAGTCCT-GTTGTtgatataggagttaaaaaggagttacttacgcagatagtgagggcacagaagtactcggtaaaggttttcctttttcatgaaaaggagtcccaaagtcactttctaagaa
i Trachypithecus_pileatus.k141_2007326                   C 0 I 1
s Tupaia_chinensis.KB320699.1                              2154984   8 +   4065304 AAGTTTT-G------------------------------------------------------------------------------------------------------------------
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     8632   8 -     10553 AAGTTTT-G------------------------------------------------------------------------------------------------------------------
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4849730   8 -   5085361 TAATCct-g------------------------------------------------------------------------------------------------------------------
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  10818   8 +     50397 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             10873   8 +     24756 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371175   8 -   5488506 TAATCCT-G------------------------------------------------------------------------------------------------------------------
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10091   8 -     43706 TAATGTT-G------------------------------------------------------------------------------------------------------------------
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        23702   5 -     24430 GAACA----------------------------------------------------------------------------------------------------------------------
i Xerus_inauris.XerIna_scaffold_48378                    I 31 I 30
s Zalophus_californianus.ZalCal_flattened_line_17732          4462   8 +     86975 TAATCTT-G------------------------------------------------------------------------------------------------------------------
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      14309   5 +     63895 TAATC----------------------------------------------------------------------------------------------------------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 3
e Echinops_telfairi.JH980293.1                            48779651 164 + 111700974 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276   0 +     12536 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   52652   8 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584   0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641   0 -      1748 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   3761   0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937   0 +    114563 C
e Sorex_araneus.JH798187.1                                13649961   0 -  18376816 C
e Sigmodon_hispidus.SigHis_scaffold_60841                    11304   0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152480   8 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367660   0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968   0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090   0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384   0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813   0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690  60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385   0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468   0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491   0 +  44047080 C
e Oryctolagus_cuniculus.CM000791.1                        67146393   0 + 174332312 C
e Orcinus_orca.KB316932.1                                  2782345   0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229   0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831   4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1362720   0 +   3988456 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183   0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422   0 +   7148211 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379  13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466   0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    20915   0 -    145209 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961   0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50341   0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352   0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344   0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     5564   0 -     14121 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650   0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493   0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293   0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626   0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547   0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604   0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173   0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577   3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051   0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516   0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312   0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689   0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752   0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347   0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175   0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084   0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076   0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            62473   5 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923   0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569   0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Crocidura_indochinensis.CroInd_scaffold_37019               1902   0 -     19598 C
e Condylura_cristata.JH655891.1                           17547413   8 -  53390261 I
e Chinchilla_lanigera.JH722012.1                           1251498   0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_713168             206   0 -      2554 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291   0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417   0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157   0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    136758   0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030   0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310   0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682   0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014   0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932   0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376   0 +  48749331 C
e Bison_bison.KN261452.1                                    200171   0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115   0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905   0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440   0 +  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      11194  23 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675   0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192   0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       5540 113 +     62944 gagcagcctgtaagatgg-------------agctgca-------------gacatagacaagccagctgcaagc--ttgcacgggtgaaggtcagc--------------aggaaaaaccta-cg-gggactaggcatgttcaaaatggcagct-cc
s Allenopithecus_nigroviridis.k141_3361533                   13461 110 -     52922 cagcagcctgtaagactg-------------agcggca-------------gacatggacaagccagctggaagc--tcgcacgggtgaaggtcagc--------------aggaaaaagcta-cc-aggactaggcatgttcaaaacggtgga----
i Allenopithecus_nigroviridis.k141_3361533               I 1 C 0
s Allochrocebus_lhoesti.k141_4309873                         13402 110 -     28001 cagcagcctgtaagactg-------------agcggca-------------gacatggacaagccagctggaagc--tcgcacgggtgaaggtcagc--------------aggaaaaagcta-cc-aggactaggcatgttcaaaacggcgga----
i Allochrocebus_lhoesti.k141_4309873                     I 1 C 0
s Allochrocebus_preussi.k141_1442296                          3848 110 -     18505 cagcagcctgtaagactg-------------agctgca-------------gacatagacaagccagctggaagc--tcgcacgggtgaaggtcagc--------------aggaaaaatcta-cc-aggactaggcatgttcaaaacggcgga----
i Allochrocebus_preussi.k141_1442296                     I 1 C 0
s Allochrocebus_solatus.k141_166128                           4697 110 -     12518 cagcagcctgtaagactg-------------agctgca-------------gacatagacaagccagctggaagc--tcgcacgggtgaaggtcagc--------------aggaaaaatcta-cc-aggactaggcatgttcaaaacggcgga----
i Allochrocebus_solatus.k141_166128                      I 1 C 0
s Alouatta_belzebul.k141_3238538                              2255  72 -     27731 ggg----ctg--------------------------ca-------------gacacaggcaagcaggccggaagc--tcgcacaggtggacgtcagc--------------aggaaagagcta-cccgg-------------------------c-tc
i Alouatta_belzebul.k141_3238538                         I 1 C 0
s Alouatta_caraya.k141_1743867                                2383  72 +      3134 ggg----ctg--------------------------ca-------------gacacaggcaagcaggccggaagc--tcgcacaggtggacgtcagc--------------aggaaagagcta-cccgg-------------------------c-tc
i Alouatta_caraya.k141_1743867                           I 1 C 0
s Alouatta_discolor.k141_743489                               2515  72 -     45847 ggg----ctg--------------------------ca-------------gacacaggcaagcaggccggaagc--ccgcacaggtggacgtcagc--------------aggaaagagcta-cccgg-------------------------c-tc
i Alouatta_discolor.k141_743489                          I 1 C 0
s Alouatta_juara.k141_1509701                                23720  72 +     25266 ggg----ctg--------------------------ca-------------gacacaggcaagcaagccggaagc--tcgcacaggtggacttcagc--------------aggaaagagcta-cccgg-------------------------c-tc
i Alouatta_juara.k141_1509701                            I 1 C 0
s Alouatta_macconnelli.k141_1406484                           2905   1 +      2906 G-------------------------------------------------------------------------------------------------------------------------------------------------------------
i Alouatta_macconnelli.k141_1406484                      I 1 N 0
s Alouatta_nigerrima.k141_3472759                            17018  72 -     18578 gag----ctg--------------------------ca-------------gacacaggtaagcaagccggaagc--tcgcacaggtggacgtcagc--------------aggaaagagcta-cccgg-------------------------c-tc
i Alouatta_nigerrima.k141_3472759                        I 1 C 0
s Alouatta_palliata.k141_2135620                              2407  72 +     47717 gag----ctg--------------------------ca-------------gacacagccaagcaagccggaagc--tcgcacaggtggacgtcagc--------------aggaaagagctaccc-gg-------------------------c-tc
i Alouatta_palliata.k141_2135620                         I 1 C 0
s Alouatta_puruensis.k141_1253230                             2534  72 -      3544 ggg----ctg--------------------------ca-------------gacacaggcaagcaagccggaagc--tcgcacaggtggacgtcggc--------------aggaaagagcta-cccgg-------------------------c-tc
i Alouatta_puruensis.k141_1253230                        I 1 C 0
s Alouatta_seniculus.k141_117119                             13755  72 +     50774 ggg----ctg--------------------------ca-------------gacacaggcaagcaagccggaagc--tcgcacaggtggacgtcagc--------------aggaaagagcta-cccgg-------------------------c-tc
i Alouatta_seniculus.k141_117119                         I 1 C 0
s Aotus_azarae.k141_3104676                                  14380  84 -     33861 gag----ctgcaaaac---tg----------agctgca-------------gacacagacaagcaggctggaagc--tcgcacaggtggacgccagg--------------aggaagaagcta-cc-gg-------------------------c-tc
i Aotus_azarae.k141_3104676                              I 1 C 0
s Aotus_griseimembra.k141_2240599                            14400  84 -     34016 gag----ctgtaaaac---tg----------agctgca-------------gacacagacaagcaggctggaagc--tcgcacaggtggacgccagc--------------aggaagaagcta-cc-gg-------------------------c-ac
i Aotus_griseimembra.k141_2240599                        I 1 C 0
s Aotus_nancymaae.KZ198451.1                               4296797  84 -   5030052 GAG----ctgcaaaac---tg----------agctgca-------------gacacagacaagcaggctggaagc--tcgcacaggtggacgccagc--------------agaaaGAAGCTA-CC-GG-------------------------C-tc
i Aotus_nancymaae.KZ198451.1                             I 1 C 0
s Aotus_trivirgatus.k141_2152450                             14402  84 -     34685 gag----ctgcaaaac---tg----------agctgca-------------gacacagacaagcaggctggaagc--tcgcacaggtggacgccagc--------------agggagaagcta-cc-gg-------------------------c-tc
i Aotus_trivirgatus.k141_2152450                         I 1 C 0
s Aotus_vociferans.k141_344750                               27526  84 -     47192 gag----ctgcaaaac---tg----------agctgca-------------gacacagacaagcaggctggaagc--tcgcacaggtggacgccagc--------------aggaagaagcta-cc-gg-------------------------c-tc
i Aotus_vociferans.k141_344750                           I 1 C 0
s Callibella_humilis.k141_1278103                             4140  72 -     10423 gag------------------------------ctgca-------------gacacagacaaggcggccggaagc--tcgcacaggtgg--------acaccagcaggaag------aagcta-cccgg-------------------------c-cc
i Callibella_humilis.k141_1278103                        I 1 C 0
s Callimico_goeldii.k141_1091182                             23625  69 +     31915 gag------------------------------ctgcaaaactgagctgcggacacagacaggcaggctgcacgc--cagca--ggaag----------------------------aagcca-cgcgg-------------------------c-cc
i Callimico_goeldii.k141_1091182                         I 1 C 0
s Callithrix_geoffroyi.k119_512088                            4106  72 +      5267 gag------------------------------ctgca-------------gacacagacaaggcggccggaagc--tcgcacaggtgg--------acaccagcaggaag------aagcta-cccgg-------------------------c-cc
i Callithrix_geoffroyi.k119_512088                       I 1 C 0
s Callithrix_jacchus.pat_scaffold_3                       23589320  72 - 189096842 GAG------------------------------CTGCA-------------GACACAGACAAAGCGGCCGGAAGC--TCGCACAGGTGG--------ACAACAGCAGGAAG------AAGCTA-CCCGG-------------------------C-cc
i Callithrix_jacchus.pat_scaffold_3                      I 1 C 0
s Callithrix_kuhlii.k119_1164682                             10850  72 -     12001 gag------------------------------ctgca-------------gacacagacaaagcggccggaagc--tcacacaggtgg--------acaacagcaggaag------aagcta-cctgg-------------------------c-cc
i Callithrix_kuhlii.k119_1164682                         I 1 C 0
s Cebuella_niveiventris.k141_1251222                          8765  72 -     11392 gag------------------------------ctgca-------------gacacagacaaggcggccggaagc--tcgcacaggtgg--------acaccagcaggaag------aagcta-cccgg-------------------------c-cc
i Cebuella_niveiventris.k141_1251222                     I 1 C 0
s Cebuella_pygmaea.k141_1309012                               4863  72 -      7577 gag------------------------------ctgca-------------gacacagacaaggcggccggaagc--tcgcacaggtgg--------acaccagcaggaag------aagcta-cccgg-------------------------c-cc
i Cebuella_pygmaea.k141_1309012                          I 1 C 0
s Cebus_albifrons.Contig27                                25650889  82 +  26074798 gag----ctgcaaaac---------------agctgtg-------------gacacagacaggcaggctggaagc--tcgcacaggtggacaccagc--------------aggaagaagcta-cc-gg-------------------------c-tc
i Cebus_albifrons.Contig27                               I 1 C 0
s Cebus_olivaceus.k141_398305                                  466  82 +      1777 gag----ctgcaaaac---------------agctgtg-------------gacacagacaggcaggctggaagc--tcgcacaggtggacaccagc--------------aggaagaagcta-cc-gg-------------------------c-tc
i Cebus_olivaceus.k141_398305                            I 1 C 0
s Cebus_unicolor.k141_544048                                 48797  82 -     74725 gag----ctgcaaaac---------------agttgtg-------------gacacagacaggcaggctggaagc--tcgcacaggtggacaccagc--------------aggaagaagcta-cc-gg-------------------------c-tc
i Cebus_unicolor.k141_544048                             I 1 C 0
s Cercocebus_atys.KQ010504.1                               4474414 110 +   4669795 CAGCAGCCTGTAAGACTG-------------AGCGGCA-------------GACATGGACAAGCCAGCTGGAAGC--TCGCAGGCCTGAAGGTCAGC--------------AGGAAAAAGCTA-CC-AggactaggcatgttcaaaaCGGCgga----
i Cercocebus_atys.KQ010504.1                             I 1 C 0
s Cercocebus_chrysogaster.k141_393940                        12963 110 -     19203 cagcagcctgtaagactg-------------agcggca-------------gacatggacaagccagctggaagc--tcgcaggcctgaaggtcagc--------------aggaaaaagcta-cc-aggactaggcatgttcaaaacggcaga----
i Cercocebus_chrysogaster.k141_393940                    I 1 C 0
s Cercocebus_lunulatus.k141_3846941                           7385 110 +      8260 cagcagcctgtaagactg-------------agcggca-------------gacatggacaagccagctggaagc--tcgcaggcctgaaggtcagc--------------aggaaaaagcta-cc-aggactaggcatgttcaaaacggcaga----
i Cercocebus_lunulatus.k141_3846941                      I 1 C 0
s Cercocebus_torquatus.k141_3057011                           7611 110 +     27781 cagcagcctgtaagactg-------------agcggca-------------gacatggacaagccagctggaagc--tcgcaggcctgaaggtcagc--------------aggaaaaagcta-cc-aggactaggcatgttcaaaacggcgga----
i Cercocebus_torquatus.k141_3057011                      I 1 C 0
s Cercopithecus_ascanius.k141_1024104                         7771 110 -     20310 cagcagcctgtaagactg-------------agctgca-------------gacatagactagccagctggaagc--tcgcacgcgtgaaggtcagc--------------aggaaaaagcta-cc-aggactaggcatgttcaaaacggcgga----
i Cercopithecus_ascanius.k141_1024104                    I 1 C 0
s Cercopithecus_cephus.k141_1078548                          10750 110 +     29689 cagcagcctgtaagactg-------------agctgca-------------gacatagactagccagctggaagc--tcgcacgcgtgaaggtcagc--------------aggaaaaagcta-cc-aggactaggcatgttcaaaacggcgga----
i Cercopithecus_cephus.k141_1078548                      I 1 C 0
s Cercopithecus_diana.k141_2427854                            5181 110 +      9989 cagcagcctgtaagactg-------------agctgca-------------gacatagacaagccagctggaagc--tcgcacgcgtgaaggtcagc--------------aggaaaaagcta-cc-aggactaggcatgttaaaaacggcgga----
i Cercopithecus_diana.k141_2427854                       I 1 C 0
s Cercopithecus_hamlyni.k141_187466                          13429 110 -     27936 cagcagcctgtaagactg-------------agcggca-------------gacacagacaagccagctggaagc--tcgcacgcgtgaaggtcagc--------------aggaaaaagcta-cc-aggactaggcatgttcaaaacggcgga----
i Cercopithecus_hamlyni.k141_187466                      I 1 C 0
s Cercopithecus_lowei.k141_1854285                            2295 110 -     17152 cagcagcctgtaagactg-------------ggctgca-------------gatatggacaagccagctggaagc--tcgcacacatgaaggtcagc--------------aggaaaaagcta-cc-aggactaggcatgttcaaaacagcgga----
i Cercopithecus_lowei.k141_1854285                       I 1 C 0
s Cercopithecus_albogularis.ctg5                                38815833 110 +  39242232 cagcagcctgtaagactg-------------agctgca-------------ggcatagactagccagctggaagc--tcgcacgcgtgaaggtcagc--------------aggaaaaagcta-cc-aggactaggcatgttcaaaacggcgga----
i Cercopithecus_albogularis.ctg5                               I 1 C 0
s Cercopithecus_mona.ctg39                                21221524 110 -  21565898 cagcagcctgtaagactg-------------agctgca-------------gatatggacaagccagctggaagc--tcgcacacgtgaaggtcagc--------------aggaaaaagcta-cc-aggactaggcatgttcaaaacggcgga----
i Cercopithecus_mona.ctg39                               I 1 C 0
s Cercopithecus_neglectus.k141_2526306                       38642 110 -     53127 cagcagcctgtaagactg-------------agctgca-------------gatatggacaagccagctggaagc--tcgcacacatgaaggtcagc--------------aggaaaaagcta-cc-aggactaggcatgttcaaaacggcgga----
i Cercopithecus_neglectus.k141_2526306                   I 1 C 0
s Cercopithecus_nictitans.k141_3278028                        5913 110 +      7159 cagcagcctgtaagactg-------------agctgca-------------gacatagactagccagctggaagc--tcgcacgcgtgaaggtcagc--------------aggaaaaagcta-cc-aggactaggcatgttcaaaacggcgga----
i Cercopithecus_nictitans.k141_3278028                   I 1 C 0
s Cercopithecus_petaurista.k141_807961                       13445 110 -     27947 cagcagcctgtaagactg-------------agctgca-------------gatatggacaagccagctggaagc--tcgcacgcatgaaggtcagc--------------aggaaaaagcta-cc-aggactaggcatgttcaaaacggcgga----
i Cercopithecus_petaurista.k141_807961                   I 1 C 0
s Cercopithecus_pogonias.k141_822820                         13418 110 +     17596 cagcagcctgtaacactg-------------agctgca-------------gatatggacaagccagctggaagc--tcgcacacatgaaggtcagc--------------aggaaaaagcta-cc-aggactaggcatgttcaaaacggcgga----
i Cercopithecus_pogonias.k141_822820                     I 1 C 0
s Cercopithecus_roloway.k141_2567858                          2652 110 +     26000 cagcagcctgtaagactg-------------agctgca-------------gacatagacaagccagctggaagc--tcgcacgcgtgaaggtcagc--------------aggaaaaagcta-cc-aggactaggcatgttaaaaacggcgga----
i Cercopithecus_roloway.k141_2567858                     I 1 C 0
s Chiropotes_albinasus.k141_2813271                          10041  56 +     11226 ----------------tg-------------agctgca-------------gacacagacaggccggctggaagc--ttgcacaggtggaagctacc-c------------gg---------------------------------------------
i Chiropotes_albinasus.k141_2813271                      C 0 I 4
s Chlorocebus_aethiops.ctg25                              18427402 110 -  18827391 cagcagcctgtaagactg-------------agcggca-------------gacatggacaagccagctggaagc--tcgcacgggtgaaggtcagc--------------aggaaaaatcta-cc-aggactaggcatgttcaaaacggcgga----
i Chlorocebus_aethiops.ctg25                             I 1 C 0
s Chlorocebus_pygerythrus.k141_1025673                       13839 110 -     50209 cagcagcctgtaagactg-------------agcggca-------------gacatggacaagccagctggaagc--tcgcacgggtgaaggtcagc--------------aggaaaaatcta-cc-aggactaggcatgttcaaaacggtgga----
i Chlorocebus_pygerythrus.k141_1025673                   I 1 C 0
s Chlorocebus_sabaeus.CM001947.1                         135420839 110 + 135778131 CAGcagcctgtaagactg-------------agcggca-------------gacatggacaagccagctggaagc--tcgcacgggtgaaggtcagc--------------aggaaAAATCTA-CC-AGGACTAGGCATGTTCAAAACGGCgga----
i Chlorocebus_sabaeus.CM001947.1                         I 1 C 0
s Colobus_angolensis.KN981557.1                            1909352 113 +   2368649 CAGCAGCCTGTAAGACTG-------------AGCGGCA-------------GGCATAGACAAGccagctggaagc--ttgcacaggtgaagGTCAGC--------------AGGAAAAAGCTA-CC-Aggactaggcatgttcaaaacggcggct-cc
i Colobus_angolensis.KN981557.1                          I 1 C 0
s Colobus_polykomos.k141_906115                              35890 113 +     84244 cagcagcctgtaagactg-------------agcggca-------------ggcatagacaagccagctggaagc--ttgcacgggtgaaggtcagc--------------aggaaaaagcta-cc-aggactaggcatgttcaaaacggcggct-cc
i Colobus_polykomos.k141_906115                          I 1 C 0
s Erythrocebus_patas.Contig38                             21204010 110 -  21539334 cagcagcctgtaagactg-------------agcggca-------------gacatagacaagccagctggaagc--tcacacgggtgaaggtcagc--------------aggaaaaagcta-cc-aggtctaggcatgttcaaaacagtgga----
i Erythrocebus_patas.Contig38                            I 1 C 0
s Gorilla_beringei.k141_3596273                              14795 113 -     32273 gagcagcctgtaagatgg-------------agctgca-------------gacatagacaagccagcggcaagc--ttgcacgggtgaaggtcagc--------------aggaaaaaccta-cg-gggactaggcatgttcaaaatggcagct-cc
i Gorilla_beringei.k141_3596273                          I 1 C 0
s Gorilla_gorilla.LT578341.1                             186336941 113 + 186649187 gagcagcctgtaagatgg-------------agctgca-------------gacatagacaagccagcggcaagc--ttgcacgggtgaaggtcagc--------------aggaaaaaccta-cg-gggactaggcatgttcaaaatggcagct-cc
i Gorilla_gorilla.LT578341.1                             I 122 C 0
s Hoolock_leuconedys.ctg274                                    433609 113 +    630532 gagtagcctgtaagatgg-------------agctgca-------------gacatagacaagccagcggcaaac--ttgcacagctgaaggtcagc--------------aggaaaaagcta-cc-gggactaggcatgttcagaatggcggct-cc
i Hoolock_leuconedys.ctg274                                 I 1 C 0
s Hylobates_agilis.k141_232023                                1375 113 -     12752 gggcagcctgtaagatgg-------------agctgca-------------gacatagacaagccagcagcaagc--ttgcacaggtgaaggtcagc--------------aggaaaaagcta-cc-gggactaggcatgttcaaaatggcggct-cc
i Hylobates_agilis.k141_232023                           I 1 C 0
s Hylobates_klossii.k141_240831                               1419 113 +     14092 gggcagcctgtaagatgg-------------agctgca-------------gacatagacaagccagcagcaagc--ttgcacaggtgaaggtcagc--------------aggaaaaagcta-cc-gggactaggcatgttcaaaatggcggct-cc
i Hylobates_klossii.k141_240831                          I 1 C 0
s Hylobates_pileatus_b.LG02                                     189542202 113 - 191637585 gggcagcctgtaagatgg-------------agctgca-------------gacatagacaagccagcagcaagc--ttgcacaggtgaaggtcagc--------------aggaaaaagcta-cc-gggactaggcatgttcaaaatggcggct-cc
i Hylobates_pileatus_b.LG02                                     I 1 C 0
s Hylobates_pileatus_a.tarseq_633                            3335096 113 -  11177569 gggcagcctgtaagatgg-------------agctgca-------------gacatagacaagccagcagcaagc--ttgcacaggtgaaggtcagc--------------aggaaaaagcta-cc-gggactaggcatgttcaaaatggtggct-cc
i Hylobates_pileatus_a.tarseq_633                          I 1 C 0
s Leontocebus_fuscicollis.k141_1820339                        6396  73 +     64341 gag------------------------------ctgca-------------gacacagacaagccggctggaagc--tcgcacaggtggatgccagc--------------aggaagaagcta-cccgg-------------------------ctcc
i Leontocebus_fuscicollis.k141_1820339                   I 1 C 0
s Leontocebus_illigeri.k141_3350179                           3723  73 +      4941 gag------------------------------ctgca-------------gacacagacaagccggctggaagc--tcgcacaggtggacgccagc--------------aggaagaagcta-cccgg-------------------------ctcc
i Leontocebus_illigeri.k141_3350179                      I 1 C 0
s Leontocebus_nigricollis.k141_4610752                        6439  73 +     35603 gag------------------------------ctgca-------------gacacagacaagccggctggaagc--tcgcacaggtggatgccagc--------------aggaagaagcta-cccgg-------------------------ctcc
i Leontocebus_nigricollis.k141_4610752                   I 1 C 0
s Leontopithecus_chrysomelas.k141_1519602                    27916  69 +     38576 gag---------------ctgcaaaactgag--ctgca-------------gacacagacaggtgggctgcacac--cag--caggaag----------------------------aagcta-cccag-------------------------c-cc
i Leontopithecus_chrysomelas.k141_1519602                I 1 C 0
s Leontopithecus_rosalia.k141_464620                         24613  69 +     66356 gag---------------ctgcaaaactgag--ctgca-------------gacacagacaggtgggctgcacac--cag--caggaag----------------------------aagcta-cccag-------------------------c-cc
i Leontopithecus_rosalia.k141_464620                     I 1 C 0
s Lophocebus_aterrimus.ctg367                              1435961 110 +   1826925 cagcagcctgtaagactg-------------agcggca-------------gacatggacaagccagctggaagc--tcgcacgcgtgaaggtcagc--------------aggaaaaagcta-cc-aggactaggcatgttcaaaacggcgga----
i Lophocebus_aterrimus.ctg367                            I 1 C 0
s Macaca_arctoides.k141_2326796                               5775 108 +     40492 cagcagcctgtaagactg-------------agcggca-------------ttcatggacaagccagc-ggaagc--tcgcacgcgtgaaggtcagc--------------aggaaaaagcta-cc-aggactaggcatgttcaaaacgg-gga----
i Macaca_arctoides.k141_2326796                          I 1 C 0
s Macaca_assamensis.Contig5                               59675037 108 +  60120075 cagcagcctgtaagactg-------------agcggca-------------ttcatggacaagccagc-ggaagc--tcgcacgcgtgaaggtcagc--------------aggaaaaagcta-cc-aggactaggcatgttcaaaacag-gga----
i Macaca_assamensis.Contig5                              I 1 C 0
s Macaca_cyclopis.k119_18836                                 11553 109 -     26193 cagcagcctgtaagactg-------------agcagca-------------ttcatggacaagccagctggaagc--tcgcacgcgtgaaggtcagc--------------aggaaaaagcta-cc-aggactaggcatgttcaaaacgg-gga----
i Macaca_cyclopis.k119_18836                             I 1 C 0
s Macaca_fascicularis.k141_814140                            79336 109 -    114318 cagcagcctgtaagactg-------------agcggca-------------ttcatggacaagccagctggaagc--tcgcacgcgtgaaggtcagc--------------aggaaaaagcta-cc-aggactagtcatgttcaaaacag-gga----
i Macaca_fascicularis.k141_814140                        I 1 C 0
s Macaca_fuscata.k119_255327                                  5033 103 -     23192 cagcagcctgtaagactg-------------agcggca-------------ttcatggacaagccagctggaagc--tcgca------aaggtcagc--------------aggaaaaagcta-cc-aggactaggcatgttcaaaacgg-gga----
i Macaca_fuscata.k119_255327                             I 1 C 0
s Macaca_leonina.k141_3550399                                14495 109 -     29190 cagcagcctgtaagactg-------------agcggca-------------ttcatggacaagccagctggaagc--tcgcacgcgtgaaggtcagt--------------aggaaaaagcta-cc-aggactaggcatgttcaaaacgg-gga----
i Macaca_leonina.k141_3550399                            I 1 C 0
s Macaca_maura.k141_2733130                                  23060 109 +     37952 cagcagcctgtaggactg-------------agcggca-------------ttcatggacaagccagctggaagc--tcgcacgcgtgaaggtcagc--------------agggaaaagcta-cc-aggactaggcatgttcaaaacgg-gga----
i Macaca_maura.k141_2733130                              I 1 C 0
s Macaca_mulatta.NC_041758.1                             186838151 109 + 187317192 CAGCAGCCTGTAAGACTG-------------AGCGGCA-------------TTCATGGACAAGCCAGCTGGAAGC--TCGCACGCGTGAAGGTCAGC--------------AGGAAGAAGCTA-CC-AGGACTAGGCATGTTCAAAACGG-GGA----
i Macaca_mulatta.NC_041758.1                             I 1 C 0
s Macaca_nemestrina.KQ007038.1                            25456712 109 -  25927173 CAGCAGCCTGTAAGACTG-------------AGCGGCA-------------TTCATGGACACGCCAGCTGGAAGC--TCACACGCGTGAAGGTCAGC--------------AGGAAAAAGCTA-CC-AGGACTAGGCATGTTCAAAACGG-gga----
i Macaca_nemestrina.KQ007038.1                           I 1 C 0
s Macaca_nigra.k141_1655396                                  78911 109 +     89720 cagcagcctgtaagactg-------------agcggca-------------ttcatggacaagccagctggaagc--tcgcacgcgtgaaggtcagc--------------agggaaaagcta-cc-aggactaggcatgttcaaaacgg-gga----
i Macaca_nigra.k141_1655396                              I 1 C 0
s Macaca_radiata.k141_3680011                                 5909 109 +     20474 cagcagcctgtaagactg-------------agcggca-------------ttcatggacaagccagctggaagc--tcgcacgcgtgaaggtcagc--------------aggaaaaagcta-cc-aggactaggcatgttcaaaacgg-gga----
i Macaca_radiata.k141_3680011                            I 1 C 0
s Macaca_siberu.k141_635500                                   5709 109 -     14993 cagcagcctgtaagactg-------------agcggca-------------ttcatggacaagccagctggaagc--tcgcacgcgtgaaggtcagc--------------agggaaaagcta-cc-aggactaggcatgttcaaaacgg-gga----
i Macaca_siberu.k141_635500                              I 1 C 0
s Macaca_silenus.Contig273                                  328580 109 -    668171 cagcagcctgtaagactg-------------agcggca-------------ttcatggacaagccagctggaagc--tcgcacgcgtgaaggtcagt--------------aggaaaaagcta-cc-aggactaggcatgttcaaaacgg-gga----
i Macaca_silenus.Contig273                               I 1 C 0
s Macaca_thibetana.k99_256239                                 4021 109 -     24072 cagcagcctgtaagactg-------------agcggca-------------ttcatggacaagccagctggaagc--tcgcacgcgtgaagggcagc--------------aggaaaaagcta-cc-aggactaggcatgttcaaaacgg-gga----
i Macaca_thibetana.k99_256239                            I 1 C 0
s Macaca_tonkeana.k141_1498238                               24648 109 -     45290 cagcagcctgtaggactg-------------agcggca-------------ttcatggacaagccagctggaagc--tcgcacgcgtgaaggtcagc--------------agggaaaagcta-cc-aggactaggcatgttcaaaacgg-gga----
i Macaca_tonkeana.k141_1498238                           I 1 C 0
s Mandrillus_leucophaeus.scaffold280                      23936234 112 -  24302211 cagcagcctgtaagactg-------------agcggca-------------gacatgggcaagccagctggaagccctcgcacgcgtgaaggtcagc--------------aggaaaaagcta-cc-aggactaggcatgttcaaaacggcgga----
i Mandrillus_leucophaeus.scaffold280                     I 1 C 0
s Mandrillus_sphinx.Contig270                               350364 110 +    752769 cagcagcctgtaagactg-------------agcggca-------------gacatgggcaagccagctggaagc--tcgcacgcgtgaaggtcagc--------------aggaaaaagcta-cc-aggactaggcatgttcaaaacggcgga----
i Mandrillus_sphinx.Contig270                            I 1 C 0
s Mico_argentatus.k141_1239457                                4680  72 -      7380 gag------------------------------ctgca-------------gacacagacaaggcggccggaagc--tcgcacaggtgg--------acaccagcgggaag------aagcta-cccgg-------------------------c-cc
i Mico_argentatus.k141_1239457                           I 1 C 0
s Mico_humeralifer.k141_1976199                               3753  72 +     18990 gag------------------------------ctgca-------------gacacagacaaggcggccggaagc--tcgcacaggtgg--------acaccagcgggaag------aagcta-cccgg-------------------------c-cc
i Mico_humeralifer.k141_1976199                          I 1 C 0
s Mico_schneideri.k141_1950671                                      4692  72 -      7356 gag------------------------------ctgca-------------gacacagacaaggcggccggaagc--tcgcacaggtgg--------acaccagcgggaag------aagcta-cccgg-------------------------c-cc
i Mico_schneideri.k141_1950671                                 I 1 C 0
s Miopithecus_ogouensis.k141_534055                           7959 110 -     28506 cagcagcctgtaagactg-------------agctgca-------------gacatagacaagccagctggaagc--tcacacgggtgaaggtcagc--------------aggaaaaagcta-cc-aggactaggcatgttcaaaacggcaga----
i Miopithecus_ogouensis.k141_534055                      I 1 C 0
s Nasalis_larvatus.k141_413338                               13950 113 +     21681 cagcagcctgtaagactg-------------agctgca-------------gacatagacaagccagctggaagc--tggcacgcgtgaaggtcagc--------------aggaaaaagcta-cc-aggactaggcatgttcaaaacagcggct-cc
i Nasalis_larvatus.k141_413338                           I 1 C 0
s Pan_paniscus.KQ411613.1                                    42888 113 +     80009 GAGCAGCCTGTAAGAtgg-------------agctgca-------------gacatagacaagccaGCTGCAAGC--TTGCACGGGTGAAGGTCAGC--------------AGGAAAAACCTA-CG-GGGActaggcatgttcaaaatggcaGCT-CC
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189141798 113 + 189151597 GAGCAGCCTGTAAGAtgg-------------agctgca-------------gacatagacaagccaGCTGCAAGC--TTGCACGGGTGAAGGTCAGC--------------AGGAAAAACCTA-CG-GGgactaggcatgttcaaaatggcAGCT-CC
i Pan_troglodytes.CM009242.2                             C 0 I 113
s Papio_anubis.CM001495.2                                183441988 106 + 183742232 CAGCAGCCTGTAAGACTG-------------AGCGGCA-------------GACATGGACAAGC----TGGAAGC--TCGCACGCGTGAAGGTCAGC--------------AGGAAAAAGCTA-CC-AGGCCTAGGCATGTTCAAAACGGCGGA----
i Papio_anubis.CM001495.2                                I 1 C 0
s Papio_cynocephalus.k141_4307930                             5682 110 +     20448 cagcagcctgtaagactg-------------agcggca-------------gacatggacaagccagctggaagc--tcgcacgcgtgaaggtcagc--------------aggaaaaagcta-cc-gggactaggcatgttcaaaacggcgga----
i Papio_cynocephalus.k141_4307930                        I 1 C 0
s Papio_hamadryas.Contig39                                20562490 110 +  20919399 cagcagcctgtaagactg-------------agcggca-------------gacatggacaagccagctggaagc--tcgcacgcgtgaaggtcagc--------------aggaaaaagcta-cc-aggactaggcatgttcaaaacggcgga----
i Papio_hamadryas.Contig39                               I 1 C 0
s Papio_kindae.k141_1936966                                   4426 110 +     41871 cagcagcctgtaagactg-------------agcggca-------------gacatggacaagccagctggaagc--tcgcacgcgtgaaggtcagc--------------aggaaaaagcta-cc-aggactaggcatgttcaaaacggcgga----
i Papio_kindae.k141_1936966                              I 1 C 0
s Papio_papio.k141_802527                                     7711 110 +     27711 cagcagcctgtaagactg-------------agcggca-------------gacatggacaagccagctggaagc--tcgcacgcgtgaaggtcagc--------------aggaaaaagcta-cc-aggactaggcatgttcaaaacggcgga----
i Papio_papio.k141_802527                                I 1 C 0
s Papio_ursinus.k141_3428135                                  7789 110 +      9205 cagcagcctgtaagactg-------------agcggca-------------gacatggacaagccagctggaagc--tcgcacgcgtgaaggtcagc--------------aggaaaaagcta-cc-aggactaggcatgttcaaaacggcgga----
i Papio_ursinus.k141_3428135                             I 1 C 0
s Piliocolobus_badius.k141_1234363                           42450 113 +     62158 aagcagcctgtaagactg-------------agcggca-------------ggcatagacaagccagctggaagc--tggcacgcgtgaaggtcagc--------------aggaaaaagcca-cc-aggactaggcatgttcaacacggcggct-cc
i Piliocolobus_badius.k141_1234363                       I 1 C 0
s Piliocolobus_gordonorum.k141_381342                        37181 113 +     89929 cagcagccagtaagactg-------------agcagca-------------ggcatagacaagccagctggaagc--tggcacgcgtgaaggtcagc--------------aggaaaaagcca-cc-aggactaggcatgttcaacacggcggct-cc
i Piliocolobus_gordonorum.k141_381342                    I 1 C 0
s Piliocolobus_kirkii.k141_448987                            38597 113 +     51399 cagcagcctgtaagactg-------------agcggca-------------ggcatagacaagccagctggaagc--tggcacgcgtgaaggtcagc--------------aggaaaaagcca-cc-aggactaggcatgttcaacacggcggct-cc
i Piliocolobus_kirkii.k141_448987                        I 1 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14294835 113 -  14605196 CAGcagcctgtaagactg-------------agcggca-------------ggcatagacaagccagctggaagc--tggcacgcgtgaaggtcagc--------------aGGAAAAAGCCA-CC-aggactaggcatgttcaacacggcggct-cc
i Piliocolobus_tephrosceles.PDMG02000141.1               I 1 C 0
s Pongo_abelii.CM009266.2                                189129933 113 + 189387572 GAGCAGCCTGTAAGAtgg-------------agctgca-------------gacatagacaagccaGTGACAAGC--TTGCACGGGTGAAGGTCAGC--------------AGGAAAAACCTA-CC-AGGActaggcatgttcaaaatggcTGCT-CC
i Pongo_abelii.CM009266.2                                I 1 C 0
s Pongo_pygmaeus.ctg66                                     9569541 113 +   9816681 gagcagcctgtaagatgg-------------agctgca-------------gacatagacaagccagtgacaagc--ttgcacgggtgaaggtcagc--------------aggaaaaaccta-cc-aggactaggcatgttcaaaatggctgct-cc
i Pongo_pygmaeus.ctg66                                   I 1 C 0
s Presbytis_comata.k141_677006                               72122 113 -     81375 cagcagcctgtaagactg-------------agctgca-------------gacacagacaagccagctggaagc--ttgcacgcgtgaaggtcagc--------------agggaaaagcta-cc-gggactaggcgtgttcaacacggcggct-cc
i Presbytis_comata.k141_677006                           I 1 C 0
s Presbytis_mitrata.k141_1087752                              3942 113 +     19060 cagcagcctgtaagactg-------------agctgca-------------gacacagacaagccagctggaagt--ttgcacacgtgaaggtcagc--------------agggaaaagcta-cc-gggactaggcgtgttcaacacggcggct-cc
i Presbytis_mitrata.k141_1087752                         I 1 C 0
s Pygathrix_cinerea.k141_1153803                             13949 113 -     91421 cagcagcctgtaagactg-------------agctgca-------------gacatagacaagccagctggaagc--ttgcacgcgtgaaggtcagc--------------aggaaaaagcta-cc-gggactaggcatgttcaacacggcggct-cc
i Pygathrix_cinerea.k141_1153803                         I 1 C 0
s Pygathrix_nigripes_b.ctg100                                 7608075 110 +   7812017 cagcagcctgtaagactg-------------agctgca-------------gacatagacaagccagctggaagc--ttgcacgcgtg---gtcagc--------------aggaaaaagcta-cc-gggactaggcatgttcaacacggcggct-cc
i Pygathrix_nigripes_b.ctg100                               I 1 C 0
s Pygathrix_nigripes_a.k141_215492                             13923 110 -     72585 cagcagcctgtaagactg-------------agctgca-------------gacatagacaagccagctggaagc--ttgcacgcgtg---gtcagc--------------aggaaaaagcta-cc-gggactaggcatgttcaacacggcggct-cc
i Pygathrix_nigripes_a.k141_215492                         I 1 C 0
s Rhinopithecus_bieti.k119_217274                             5638 113 -     11128 cagcagcctgtaagactg-------------agctgca-------------gacatagacaagccagctggaagc--ttgcacgcgtgaaggtcagc--------------aggaaaaagcta-cc-gggactaggcacgctcaacacggcggct-cc
i Rhinopithecus_bieti.k119_217274                        I 1 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91234998 113 - 195417433 CAGCAGCCTGTAAGactg-------------agctgca-------------gacatagacaagccaGCTGGAAGC--TTGCACGCGTGAAAGTCAGC--------------AGGAAAAAGCTA-CC-GGGACTAGGCATGCTCAACACGGCGGCT-CC
i Rhinopithecus_roxellana.NC_044550.1                    I 1 C 0
s Rhinopithecus_strykeri.ctg102                            7670643 113 +   7961872 cagcagcctgtaagactg-------------agctgca-------------gacatagacaagccagctggaagc--ttgcacgcgtgaaggtcagc--------------aggaaaaagcta-cc-gggactaggcatgctcaacacggcggct-cc
i Rhinopithecus_strykeri.ctg102                          I 1 C 0
s Saguinus_bicolor.k141_2619299                               7105  59 -      8359 gag------------------------------ctgca-------------gacacagacaggccggctggaagc--ttgcacaggtggaa----------------------------gcta-cccgg-------------------------ctcc
i Saguinus_bicolor.k141_2619299                          I 1 C 0
s Saguinus_imperator.k141_2524406                             1046  72 +      2197 gag------------------------------ctgca-------------gacacagacaggccggctggaagc--tcgcacaggtggacgccagc--------------aggaagaagctg-ggggc-------------------------t-cc
i Saguinus_imperator.k141_2524406                        I 1 C 0
s Saguinus_inustus.k141_699149                               12468  72 +     13640 gag------------------------------ctgca-------------gacacagacaggccggctggaagc--tcgcacaggtggacgccagc--------------aggaagaagctg-ggggc-------------------------t-cc
i Saguinus_inustus.k141_699149                           I 1 C 0
s Saguinus_labiatus.k141_285685                               7332  72 +      8564 gag------------------------------ctgca-------------gacacagacaggccagctggaagc--tcgcgcaggtggacgccagc--------------aggaagaagctg-ggggc-------------------------t-cc
i Saguinus_labiatus.k141_285685                          I 1 C 0
s Saguinus_midas.LG03                                    209468180  59 + 209938924 gag------------------------------ctgca-------------gacacagacaggccggctggaagc--tcgcacaggtggaa----------------------------gcta-cccgg-------------------------ctcc
i Saguinus_midas.LG03                                    I 1 C 0
s Saguinus_mystax.k141_374627                                 6894  72 -      9399 gag------------------------------ctgca-------------gacacagacaggccggctggaagc--tcgcgcaggtggacgccagc--------------aggaagaagctg-ggggc-------------------------t-cc
i Saguinus_mystax.k141_374627                            I 1 C 0
s Saimiri_boliviensis.NW_024100920.1                     119950200  10 - 121099817 GAG----CTGAAAA------------------------------------------------------------------------------------------------------------------------------------------------
i Saimiri_boliviensis.NW_024100920.1                     I 1 C 0
s Saimiri_cassiquiarensis.k141_2188234                       22656  10 +     46362 gag----ctgaaaa------------------------------------------------------------------------------------------------------------------------------------------------
i Saimiri_cassiquiarensis.k141_2188234                   I 1 C 0
s Saimiri_macrodon.k141_716185                               22751  10 +     45824 gag----ctgaaaa------------------------------------------------------------------------------------------------------------------------------------------------
i Saimiri_macrodon.k141_716185                           I 1 C 0
s Saimiri_oerstedii.k141_1487881                             39379  10 -     64574 gag----ctgaaaa------------------------------------------------------------------------------------------------------------------------------------------------
i Saimiri_oerstedii.k141_1487881                         I 1 C 0
s Saimiri_sciureus.k141_2278166                               2385  10 -     23631 gag----ctgaaaa------------------------------------------------------------------------------------------------------------------------------------------------
i Saimiri_sciureus.k141_2278166                          I 1 C 0
s Saimiri_ustus.k141_1484609                                 22644  10 -     61129 gag----ctgaaaa------------------------------------------------------------------------------------------------------------------------------------------------
i Saimiri_ustus.k141_1484609                             I 1 I 3
s Sapajus_apella.ctg103                                    5419553  82 -   5703754 gag----ctgcaaaac---------------agctgcg-------------gacacagacaggcaggctggaagc--tcgcacaggtggacgccagc--------------aggaagaagcta-cc-gg-------------------------c-tc
i Sapajus_apella.ctg103                                  I 1 C 0
s Sapajus_macrocephalus.k141_351809                          54594  82 -     80660 gag----ctgcaaaac---------------agctgcg-------------gacacagacaggcaggctggaagc--tcgcacaggtggacgccagc--------------aggaagaagcta-cc-gg-------------------------c-tc
i Sapajus_macrocephalus.k141_351809                      I 1 C 0
s Semnopithecus_entellus.k141_11662                          18459 113 -     19888 cagcagcctgtaagactg-------------agctgca-------------gacatagacaagccagttggaagc--ttgcacgcgtgaaggtcagc--------------aggaaaaagcta-cc-aggactaggcatgttcaacacggcggct-cc
i Semnopithecus_entellus.k141_11662                      I 1 C 0
s Semnopithecus_hypoleucos.k141_1615806                      25662 113 +     39453 cagcagcctgtaagactg-------------agctgca-------------gacatagacaagccagctggaagc--tggcacccgtgaaggtcagc--------------aggaaaaagcta-cc-aggactaagcatgttcaacacggcggct-cc
i Semnopithecus_hypoleucos.k141_1615806                  I 1 C 0
s Semnopithecus_johnii.k141_670120                            6181 113 +     27826 cagcagcctgtaagactg-------------agctgca-------------gacatagacaagccagctggaagc--ttgcacgcatgaaggtcagc--------------aggaaaaagcta-cc-aggactaagcatgttcaacacggcggct-cc
i Semnopithecus_johnii.k141_670120                       I 1 C 0
s Semnopithecus_priam.k141_638794                             5701 113 -     19483 cagcagcctgtaagactg-------------agctgca-------------gacatagacaagccagctggaagc--ttgcacgcgtgaaggtcagc--------------aggaaaaagcta-cc-aggactaggcatgttcaacacggcggct-cc
i Semnopithecus_priam.k141_638794                        I 1 C 0
s Semnopithecus_schistaceus.k141_1584426                      5770 113 +      7198 cagcagcctgtaagactg-------------agctgca-------------gacatagacaagccagctggaagc--ttgcacgcgtgaaggtcagc--------------aggaaaaagcta-cc-aggactaggcatgttcaacacggcggct-cc
i Semnopithecus_schistaceus.k141_1584426                 I 1 C 0
s Semnopithecus_vetulus.k141_1200928                         14028 113 +     15514 cagcagcctgtaagactg-------------agctgca-------------gacatagacaagccagctggaagc--tggcaggggtgaaggtcagc--------------aggaaaaagcta-cc-gggactaggcatgttcaacacggcggct-cc
i Semnopithecus_vetulus.k141_1200928                     I 1 C 0
s Symphalangus_syndactylus.tarseq_199                      1092244 113 -   1523678 gggcagcctgtaagatgg-------------agctgca-------------gacatagacaagccagcagcaagc--ttgcacagctgaaggtcagc--------------aggaaaaagcta-cc-gggactaggcatgttcaaaatggcggct-cc
i Symphalangus_syndactylus.tarseq_199                    I 1 C 0
s Theropithecus_gelada.CM009954.1                        186427354 110 + 186847797 CAGCAGCCTGTAAGACTA-------------AGCGGCA-------------GACATGGACAAGCCAGCTGGAAGC--TCGCACGCGTGAAGGTCAGC--------------AGGAAAAAGCTA-CC-AGGACTAGGCATGTTCAAAACGGCGGA----
i Theropithecus_gelada.CM009954.1                        I 1 C 0
s Trachypithecus_auratus.k141_722599                          9753 113 -     20410 cagcagcctgtaagactg-------------agctgca-------------cacatagacaagccagctggaagc--tggcaggggtgaaggtcagc--------------aggaaaaagcta-cc-aggactaggcatgttcaacacggcggct-cc
i Trachypithecus_auratus.k141_722599                     I 1 C 0
s Trachypithecus_crepusculus.k141_1194022                    13949 113 +     15221 cagcagcctgtaagactg-------------agctgca-------------gacatagacaagccagctggaagc--tggcacgcgcgaaggtccgc--------------aggaaaaagcta-cc-aggactaggcatgttccacacggcggct-cc
i Trachypithecus_crepusculus.k141_1194022                I 1 C 0
s Trachypithecus_cristatus.k141_580354                        9854 113 +     19930 cagcagcctgtaagactg-------------agctgca-------------gacatagacaagccagctggaagc--tggcacgcgtgaaggtcagc--------------aggaaaaagcta-cc-aggactaggcatgttcaacacggcggct-cc
i Trachypithecus_cristatus.k141_580354                   I 1 C 0
s Trachypithecus_francoisi.k141_1412647                       6281 113 -     19997 cagcagcctgtaagactg-------------agctgca-------------gacatagacaagccagctggaagc--ttgcacgcgtgaaggtcagc--------------aggaaaaagcta-cc-aggactaggcatgttcaacacggcggct-cc
i Trachypithecus_francoisi.k141_1412647                  I 1 C 0
s Trachypithecus_geei.k141_277701                            46410 112 -     60166 cagcagcctgtaagactg-------------agctgca-------------gacatagacaaggcagctggaagc--tggcaggggtgaaggtcagc--------------aggaaaaagcta-cc-aggactaggcatgttcaacac-gcggct-cc
i Trachypithecus_geei.k141_277701                        I 1 C 0
s Trachypithecus_germaini.k141_912491                        13876 113 -     27529 cagcagcctgtaagactg-------------agctgca-------------gacatagagaagccagctggaagc--tggcacgcgtgaaggtccgc--------------aggaaaaagcta-cc-aggactaggcatgttccacacggcggct-cc
i Trachypithecus_germaini.k141_912491                    I 1 C 0
s Trachypithecus_hatinhensis.k141_143409                     13820 113 -     18194 cagcagcctgtaagactg-------------agctgca-------------gacatagacaagccagctggaagc--ttgcacgcgtgaaggtcagc--------------aggaaaaagcta-cc-aggactaggcatgttcaacacggcggct-cc
i Trachypithecus_hatinhensis.k141_143409                 I 1 C 0
s Trachypithecus_laotum.k141_907409                           7548 113 -     21137 cagcagcctgtaagactg-------------agctgca-------------gacatagacaagccagctggaagc--ttgcacgcgtgaaggtcagc--------------aggaaaaagcta-cc-aggactaggcatgttcaacacggcggct-cc
i Trachypithecus_laotum.k141_907409                      I 1 C 0
s Trachypithecus_leucocephalus.k141_587342                    6251 113 -     10723 cagcagcctgtaagactg-------------agctgca-------------gacatagacaagccagctggaagc--ttgcacgcgtgaaggtcagc--------------aggaaaaagcta-cc-aggactaggcatgttcaacacggcggct-cc
i Trachypithecus_leucocephalus.k141_587342               I 1 C 0
s Trachypithecus_melamera.k141_434728                         5407 113 +      9834 cagcagcctgtaagactg-------------agctgca-------------gacatagacaagccagctggaagc--ttgcacgcgtgaaggtcagc--------------aggaaaaagcta-cc-aggactaggcatgttcaacacggcggct-cc
i Trachypithecus_melamera.k141_434728                    I 1 C 0
s Trachypithecus_obscurus.k141_190785                        23720 113 +     32220 cagcagcctgtaagactg-------------agctgca-------------gacatagacaagccagctggaagc--ttgcacgcgtgaaggtcagc--------------aggaaaaagcta-cc-aggactaggcatgttcaacacggcagct-cc
i Trachypithecus_obscurus.k141_190785                    I 1 C 0
s Trachypithecus_phayrei.ctg124                            5937822 113 +   6242583 cagcagcctgtaagactg-------------agctgca-------------gacatagacaagccagctggaagc--tggcacgcgcgaaggtccgc--------------aggaaaaagcta-cc-aggactaggcatgttccacacggcggct-cc
i Trachypithecus_phayrei.ctg124                          I 1 C 0
s Trachypithecus_pileatus.k141_2007326                        7075 112 +     20839 cagcagcctgtaagactg-------------agctgca-------------gacatagacaagccagctggaagc--ttgcacgcgtgaaggtcagc--------------aggaaaaagcta-cc-aggactaggcatgttcaacac-gcggct-cc
i Trachypithecus_pileatus.k141_2007326                   I 1 C 0
e Echinops_telfairi.JH980293.1                            48779651 164 + 111700974 I
e Otolemur_garnettii.GL873799.1                             695356   0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         3192   0 +      8798 C
e Galago_senegalensis.k141_631886                             3367   0 +     11339 C
e Galago_moholi.ctg2040                                     425660   0 -    453645 C
e Mus_pahari.LT608297.1                                   31354391   3 -  89631738 I
e Mus_spretus.CM004101.1                                  90751796   3 - 130317789 I
e Mus_musculus.chr8                                       87649735   3 - 129401213 I
e Mus_caroli.LT608237.1                                   84360735   3 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Loris_tardigradus.ctg83                                  1003896   0 +   6120653 C
e Loris_lydekkerianus.k141_2539221                            5046   0 +     11245 C
e Perodicticus_potto.k141_1092580                             7743   0 +     25941 C
e Perodicticus_ibeanus.k141_855320                            9341   0 +     13100 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276   0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      14314   3 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_17732          4470   0 +     86975 C
e Xerus_inauris.XerIna_scaffold_48378                        23707  30 -     24430 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 10099   0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5371183   0 -   5488506 C
e Varecia_variegata.k141_1128296                             10881   0 +     24756 C
e Varecia_rubra.k141_590885                                  10826   0 +     50397 C
e Ursus_maritimus.KK499267.1                               4849738   0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   52652   8 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584   0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     8640   0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2154992   0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641   0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     80241   0 +    610378 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   3761   0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937   0 +    114563 C
e Tarsius_wallacei.k141_254427                                 579   0 -     16117 C
e Tarsius_lariang.k141_2201908                               25744   0 +     70052 C
e Tapirus_terrestris.TapTer_scaffold_755                    386522   0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      118069   0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 71444   0 +    116680 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                 9911   0 +     41958 C
e Sus_scrofa.CM000828.4                                    6809803   0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629              17619   0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             30035   0 +     97271 C
e Spermophilus_dauricus.KZ294078.1                         1952501  34 -   3870691 I
e Sorex_araneus.JH798187.1                                13649961   0 -  18376816 C
e Solenodon_paradoxus.SolPar_flattened_line_126               3065   0 +   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_60841                    11304   0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152480   8 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                87100   0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660   0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570009   3 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968   0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20273641   0 -  38429054 C
e Pteropus_vampyrus.KN525825.1                             1359168   0 +   4952924 C
e Pteropus_alecto.KB030862.1                              22976082   0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         39533   0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            13999   0 -     21811 C
e Psammomys_obesus.NESX01036370.1                             9765   3 -     21651 I
e Propithecus_verreauxi.k141_956661                           4204   0 -      6182 C
e Propithecus_tattersalli.k141_790011                        27982   0 -     67325 C
e Propithecus_perrieri.k141_1200571                           4160   0 -     24134 C
e Propithecus_edwardsi.k141_1176054                          25972   0 +     35766 C
e Propithecus_diadema.k141_58108                               496   0 -     13098 C
e Propithecus_coronatus.k141_347390                          28451   0 +     38485 C
e Propithecus_coquerelli.NW_012148875.1                     990141   0 +   2598838 C
e Prolemur_simus.MPIZ01000396.1                            2596171   0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                 12252   8 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090   0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             1144   0 +     22620 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384   0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813   0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18194143   3 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690  60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11948   0 -     78924 C
e Pantholops_hodgsonii.KE114653.1                          1265385   0 -   2937107 C
e Panthera_tigris.KE722367.1                               4720331   0 -   8748460 C
e Panthera_pardus.KV860321.1                                263693   0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  150487   0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468   0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491   0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       461654   0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                        67146393   0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               9108   0 -     18566 C
e Orcinus_orca.KB316932.1                                  2782345   0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    79522   3 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                    3605   3 -     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229   0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831   4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              505962   0 -   2017862 C
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1362720   0 +   3988456 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749294   0 + 199412804 C
e Nycticebus_coucang.k141_771082                               718   0 -      2667 C
e Nycticebus_bengalensis.LG01                            102578873   0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9148686   0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183   0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422   0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20306277   0 +  31847680 C
e Nannospalax_galili.KL204047.1                            2033219   3 -   3037898 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              188089   0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33307   0 +     33610 C
e Myotis_lucifugus.GL429869.1                              3902752   0 -   4330536 C
e Myotis_davidii.KB100139.1                                1586680   0 -   6019432 C
e Myotis_brandtii.KE162005.1                                278987   0 -  10118263 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               300511   0 -  14710649 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           5814   0 +     14753 C
e Mungos_mungo.MunMun_flattened_line_23663                   34730   0 +     37127 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379  13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 140657   0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    27466   0 -    437263 C
e Mirza_zaza.k141_952172                                      8439   0 -     37649 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         5023   0 -      8324 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33619   0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849942   0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                14711   0 -     19307 C
e Microgale_talazaci.MicTal_scaffold_6613                    20915   0 -    145209 C
e Microcebus_murinus.CM007674.1                           18290893   0 -  93316391 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961   0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12181614   3 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 32131   3 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365              9333   0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                         9635   3 -    207569 I
e Marmota_marmota.CZRN01000018.1                          33101614  35 -  40650429 I
e Manis_pentadactyla.KN006162.1                              50341   0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352   0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 89911   0 +     94391 C
e Lycaon_pictus.CM007581.1                                17954432   0 -  59628241 C
e Loxodonta_africana.GL010049.1                            4216402   0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344   0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     5564   0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3042155   0 +   3914936 C
e Lepilemur_septentrionalis.k141_185316                      26379   0 +     54090 C
e Lepilemur_ruficaudatus.k141_121139                           988   0 +     25010 C
e Lepilemur_dorsalis.k141_577674                             28443   0 +     45836 C
e Lepilemur_ankaranensis.k141_596936                         10377   0 -     23766 C
e Lemur_catta.scaffold_24                                 15523493   0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    13159   0 -     42476 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650   0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493   0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293   0 +     23964 C
e Indri_indri.k141_3655594                                   21945   0 +     31101 C
e Ictidomys_tridecemlineatus.JH393364.1                    7519304  37 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      81626   0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547   0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  43778   0 +     55795 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604   0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173   0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577   3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_596025                  53   8 +       452 I
e Heterocephalus_glaber.JH602082.1                        20660051   0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516   0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               241618   0 +    327341 C
e Hapalemur_occidentalis.k141_907772                         12988   0 -     16460 C
e Hapalemur_meridionalis.k141_248335                         13150   0 -     41752 C
e Hapalemur_griseus.k141_1511508                             13049   0 +     18253 C
e Hapalemur_gilberti.k141_488810                             11410   0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           6261   0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312   0 -    660261 C
e Galeopterus_variegatus.GalVar_scaffold_108840                487   0 -      9135 C
e Galagoides_demidoff.k141_1711393                             670   0 +     41679 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  8642   0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20195128   0 + 205367284 C
e Eulemur_sanfordi.k141_1122526                              13181   0 +    111500 C
e Eulemur_rufus.k141_1476633                                  3606   0 -     17153 C
e Eulemur_rubriventer.k141_571033                            12988   0 +     26496 C
e Eulemur_mongoz.k141_232305                                 10068   0 +     97555 C
e Eulemur_macaco.k141_1562045                                12132   0 +     75513 C
e Eulemur_fulvus.k141_544389                                 13371   0 +     23973 C
e Eulemur_flavifrons.k141_1184614                            12132   0 +     26330 C
e Eulemur_coronatus.k141_885031                              14932   0 -     25546 C
e Eulemur_collaris.k141_377015                                5904   0 -     16928 C
e Eulemur_albifrons.k141_342033                              13205   0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689   0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752   0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Equus_przewalskii.KK951119.1                               32494   0 +    498745 C
e Equus_caballus.CM000403.2                               18530479   0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1282658   0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2144750   0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16328616   0 -  41312741 C
e Ellobius_talpinus.LOJH01109367.1                             607   3 +      6299 I
e Ellobius_lutescens.LOEQ01008920.1                          90425   3 +    110024 I
e Elephantulus_edwardii.JH947257.1                         1090636   0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347   0 +    607251 C
e Eidolon_helvum.KE759718.1                                   9826   0 +     11740 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175   0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084   0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    5348   0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  672595   0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8629170   0 +  20541912 C
e Delphinapterus_leucas.KZ290073.1                        16812076   0 +  35494412 C
e Daubentonia_madagascariensis.ctg71                      12536717   0 -  12879189 C
e Dasypus_novemcinctus.JH564415.1                            62473   5 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923   0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569   0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    836510   0 +   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129             27783   0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_37019               1902   0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11666932   3 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 49454   3 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          13616   0 -     20389 C
e Condylura_cristata.JH655891.1                           17547413   8 -  53390261 I
e Colobus_guereza.LG01                                   199948958   0 + 200372422 C
e Choloepus_hoffmanni.KN194906.1                            172269   0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 17169   0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498   0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           15854   0 +     57038 C
e Cheirogaleus_major.k141_333249                             20487   0 -     52598 C
e Chaetophractus_vellerosus.ChaVel_scaffold_713168             206   0 -      2554 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1772   0 -     25243 C
e Cephalopachus_bancanus.k141_1423433                         4751   0 +     31688 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291   0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417   0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157   0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     92315   0 +    217609 C
e Castor_canadensis.CasCan_scaffold_2074                    136758   0 +    179628 C
e Carollia_perspicillata.CarPer_scaffold_92756                4154   0 -     11696 C
e Carlito_syrichta.NW_007247396.1                           200736   0 +    308752 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030   0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310   0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18499704   0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17958192   0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9033927   0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    184541   0 -    185531 C
e CanFam4.chr16                                           17798484   0 -  60362399 C
e Camelus_ferus.KB017975.1                                  402438   0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2334155   0 -   7040546 C
e Camelus_bactrianus.KN276810.1                           10001697   0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2819682   0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014   0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932   0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376   0 +  48749331 C
e Bison_bison.KN261452.1                                    200171   0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115   0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905   0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440   0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              53729   0 +     85213 C
e Avahi_laniger.k141_765380                                  53100   0 -     92717 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3791   0 +     43469 C
e Arctocebus_calabarensis.k141_2318572                       10712   0 +     14667 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      11194  23 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675   0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      184379   0 +    412891 C
e Ammotragus_lervia.NIVO01071767.1                          676192   0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74034   3 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             78649   0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9509878   0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_11939                     24695   3 -     89785 I
e Acinonyx_jubatus.LLWD01001279.1                           826634   0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       5653 114 +     62944 atctccctttccctttgccaaccacgtgtacaggaaggagcagacaagatggcaccggtcaagtggaaagcccaattgcataataatgttagggtggggcggccagcctt-ctcc
s Allenopithecus_nigroviridis.k141_3361533                   13571 114 -     52922 gtctccctttccctttgccagccacgtgtaggggaaggagcagacaagatggcaccggtcaagtggaaagtccatttgcatagtaagattctggtggggcggccagcctt-cccc
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         13512 114 -     28001 gtctcccttttcctttgccagccaggtgtaggggaaggagcagacaagatggcaccggtcaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          3958 114 -     18505 gtctccctttccctttgccagccaggtgtaggggaaggagcagacaagatggcaccggtcaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           4807 114 -     12518 gtctccctttccctttgccagccaggtgtaggggaaggagcagacaagatggcaccggtcaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Allochrocebus_solatus.k141_166128                      C 0 I 54
s Alouatta_belzebul.k141_3238538                              2327 113 -     27731 acctgcccttccctccgccggccacgtgtccagtaaggagcagacaaggtggcaggaatcaagtggaacatccatttgc-taataatattagggtggcgtggccggcctc-ctgt
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                2455 114 +      3134 acctgcccttccctccgccggccacgtgtccagtaaggagcagacaaggtggcaggaatcaagtggaacatccatttgtgtaataatattagggtggcgtggccggcctc-ctgt
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               2587 113 -     45847 acctgcccttccctccgccggccacgtgtccagtaaggagcagacaaggtggcaggaatcaagtggaacatccatttgc-taataatattagggtggcgtggccagcctc-ctgt
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                23792 114 +     25266 acctccccttcccttcgccggccacgtgtccagtaaggagcagacaaggtggcagcaatcaagtggaacattcatttgcgtaataatattagggtggcgtggccggcctc-ctgt
i Alouatta_juara.k141_1509701                            C 0 I 41
s Alouatta_nigerrima.k141_3472759                            17090 114 -     18578 acctccccttccctccgccggccacgtgtccagtaaggagcagacaaggtggcagcaatcaagtggaacatccatttgcataataatattagggtggcatggccagcctc-ctct
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              2479 114 +     47717 acctccccttccctttgtcggccacgtgtccagtaaggagcagacaaggtggcagcaatcaagtggaacatccatttgcgtaataatattagggtggcgtggccggcctc-ctgt
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             2606  99 -      3544 acctccccttcccttcgccggccacgtgtccagtaaggagcagacaa---------------gtggaacatccatttgtgtaataatattagggtggcgtggccggcctc-ctgt
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             13827  99 +     50774 acctccccttcccttcgccggccacgtgtccagtaaggagcaga---------------caagtggaacatccatttgtgtaataatattagggtggcgtggccagcctc-ctgt
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  14464 114 -     33861 atctctccttccctttgccagccacgtgtccagtaaggagcagacaagatggcaccaatcacgtagaaagtccatttgcatgataatattagggtggcgtggccagcctc-ctct
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            14484 114 -     34016 atctctccttccctttgccagccacgtgtccagtaaggagcagacaagatggcaccaatcacgtagaaagtccatttgcatgataatattagggtggcgtggccagcctc-ctct
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4296881 114 -   5030052 atctctccttccctttgcCAGCCACGTGTccagtaaggagcagacaagatggcaccAATcacgtagaaagtccatttgcatgataatattagggtggcgtggccagcctc-ctct
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             14486 114 -     34685 atctctccttccctttgccagccacgtgtccagtaaggagcagacaagatggcaccaatcacgtagaaagtccatttgcatgataatattagggtggcgtggccagcctc-ctct
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               27610 114 -     47192 atctctccttccctttgccagccacgtgtccagtaaggagcagacaagatggcaccaatcacgtagaaagtccatttgcatgataatattagggtggcgtggccagcctc-ctct
i Aotus_vociferans.k141_344750                           C 0 C 0
s Callibella_humilis.k141_1278103                             4212 114 -     10423 atctccccttccctttgccagccacatgtgcagtaaggagtagacaagatggcaccaatcacttggaaagtccatttgcataagaacagtagtgtggcgtggccagactc-ctct
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             23694 109 +     31915 atcccc--ttccctctgccagccaggtgtgcagtaaggagcaggcaagatggcaccaatcacgtggaaggtccatttgcataataata---gcgtggcgtggccagcccc-ctct
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            4178 114 +      5267 atctccccttccctttgccagccacatgtgcagtaaggagcagacaagatggcaccactcatttggaaagtccatttgcataagaatagtagcgtggcgtggccagactc-ctct
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23589392 114 - 189096842 atctccccttccctttgccagccacatgtgcagtaaggagcagacaagatggcaccaatcacttggaaagtccatttgcataagaatagtagcgtggcgtggccagactc-ctct
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             10922 114 -     12001 atctccccttccctttgccagccacatgtgcagtaaggagcagacaagatggcaccaatcacttggaaagtccatttgcataagaatagtagcgtggcgtggccagactc-ctct
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Cebuella_niveiventris.k141_1251222                          8837 114 -     11392 atctccccttccctttgccagccacatgtgcagtaaggagcagacaagatggtaccaatcacttggaaagtccatttgcataagaatagtagtgtggcgtggccagactc-ctct
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               4935 114 -      7577 atctccccttccctttgccagccacatgtgcagtaaggagcagacaagatagcaccaatcacttggaaagtccatttgcataagaatagtagtgtggcgtggccagactc-ctct
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25650971 107 +  26074798 gtct-cccttccctttgccagccacgtgtgcagtaaggagcagac--gatggcaccaatcacgcggaaagtccttttgcataatgacattagggtggcgtg----gcctc-ctct
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_398305                                  548 107 +      1777 gtct-cccttccctttgccagccacgtgtgcagtaaggagcagac--gatggcaccaatcacgcggaaagtccttttgcataatgacattagggtggcgtg----gcctc-ctct
i Cebus_olivaceus.k141_398305                            C 0 C 0
s Cebus_unicolor.k141_544048                                 48879 107 -     74725 gtct-cccttccctttgccagccacgtgtgcagtaaggagcagac--gatggcaccaatcacgcggaaagtccttttgcataatgacattagggtggcgtg----gcctc-ctct
i Cebus_unicolor.k141_544048                             C 0 C 0
s Cercocebus_atys.KQ010504.1                               4474524 114 +   4669795 gtctccctttccctttGCCAGCCACGTGTAGGggaaggagcagacaagatggcaccggtcaagtggaaagtccatttgcaaaataagattctggtggggcggccagcctt-cccc
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        13073 114 -     19203 gtctccctttccctttgccagccacgtgtaggggaaggagcagacaagatggcactggtcaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           7495 114 +      8260 gtctccctttccctttgccagccacgtgtaggggaaggagcagacaagatggcaccggtcaagtggaaagtccatttgcaaaataagattctggtggggcggccagcctt-cccc
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           7721 114 +     27781 gtctccctttccctttgccagccacgtgtaggggaaggagcagacaagatggcaccggtcaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         7881 114 -     20310 gtctccctttccctttgccagccaggtgtaggggaaggagcagacaagatggcaccggtcaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          10860 114 +     29689 gtctccctttccctttgccagccaggtgtaggggaaggagcagacaagatggcaccggtcaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            5291 112 +      9989 gtctccctttccctttgccagccacgtgtaggg-aaggatcagacaagatggcaccggtcaagtggaaagtccatttgcataataagattctggtggggcg-ccagcctt-cccc
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          13539 114 -     27936 gtctccctttccctttgccagccacgtgtaggggaaggagcagacaagatggcaccggtcaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            2405 114 -     17152 gtctccctttccctttgccagccaggtgtaggggaaggagcagacaagatggcaccggtcaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38815943 114 +  39242232 gtctccctttccctttgccagccaggtgtaggggaaggagcagacaagatggcaccggtcaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21221634 114 -  21565898 gtctccctttccctttgccagccaggtgtaggggaaggagcagacaagatggcaccggtcaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       38752 114 -     53127 gtctccctttccctttgccagccaggtgtaggggaaggagcagacaagatggcaccggtcaagtggaaagtccatttgcataataagattctggtggggcggccagcttt-cccc
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        6023 115 +      7159 gtctccctttccctttgccagccaggtgtaggggaaggagcagacaagatggcaccggtcaagtggaaagtccatttgcataataagattctggtggggcggccagccttccccc
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       13555 114 -     27947 gtctccctttccctttgccagccaggtgtaggggaaggagcagacaagatggcaccggtcaaatggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         13528 114 +     17596 gtctccctttccctttgccagccaggtgtgggggaaggagcagacaagatggcaccggtcaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          2762 114 +     26000 gtctccctttccctttgccagccacgtgtaggggaaggagcagacaagatggcaccggtcaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Chiropotes_albinasus.k141_2813271                          10101 114 +     11226 atccccccttccctttgccagccacctttgcagtaaggagccggtaagatggcaccaatcacgtagaaaatgcatttgcataataatagtagcatggcgtggccagcctc-ccct
i Chiropotes_albinasus.k141_2813271                      I 4 C 0
s Chlorocebus_aethiops.ctg25                              18427512 114 -  18827391 gtctccctttccctttgccagccaggtgtaggggaaggagcagacaagatggcaccagtcaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       13949 114 -     50209 gtctccctttccctttgccagccaggtgtaggggaaggagcagacaagatggcaccggtcaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135420949 114 + 135778131 gtctccctttccctttGCCAGCCAGGTGTAGGggaaggagcagacaagatggcaccGGTCAAGTGGAAagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1909465 114 +   2368649 atctccctttccctttgccagccacgtgtacGggaaggagcagacaagatggcaccGGTCAAGTGGAAagtccatttgcataataagattctggtggggcggccagcctt-ccct
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_polykomos.k141_906115                              36003 114 +     84244 atctccctttccctttgccagccacgtgtacgggaaggagcagacaagatggcaccggtcaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Colobus_polykomos.k141_906115                          C 0 C 0
s Erythrocebus_patas.Contig38                             21204120 114 -  21539334 gtctccctttccctttgccagccaggtgtaggggaaggagcagacaagatggcatcggtcaagtggaaagtccatttgcataataagattctggtggggtggccagcctt-cccc
i Erythrocebus_patas.Contig38                            C 0 C 0
s Gorilla_beringei.k141_3596273                              14908 114 -     32273 atctccctttccctttgccaaccacgtgtacaggaaggagcagacaagatggcactggtcaagtggaaagcgcaattgcataataacgttagggtggggtggccagcctt-ctcc
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186337054 114 + 186649187 atctccctttccctttgccaaccacgtgtacaggaaggagcagacaagatggcactggtcaagtggaaagcgcaattgcataataacgttagggtggggtggccagcctt-ctcc
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hoolock_leuconedys.ctg274                                    433722 114 +    630532 atctcccctttcctttgccagccacacatacaggaaggagcagacaagatggcacaggtcaagtggaaagcccaattgcataataacattagggtagggcagccagcctt-ccct
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_232023                                1488 114 -     12752 atctcccctttcctttgccagccacgcatacaggaaggagcagacaagatggcacaggtcaagtgggaagcccaattgcataataacattagggtagggtggccagcctt-ccct
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                               1532 114 +     14092 atctcccctttcctttgccagccacgcatacaggaaggagcagacaagatggcacaggtcaagtggaaagcccaattgcataataacattagggtagggtggccagcctt-ccct
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189542315 114 - 191637585 atcacccctttcctttgccagccacgcatacaggaaggagcagacaagatggcacaggtcaagtggaaagcccaattgcataataacattagggtagggtggccagcctt-ccct
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3335209 114 -  11177569 atctcccctttcctttgccagccacgcatacaggaaggagcagacaagatggcacaggtcaagtggaaagcccaattgcataataacattagggtagggtggccagcctt-ccct
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        6469 114 +     64341 atccccgcttccctttgccagccacgtgtgcagtaaggagcagacaagatggcaccaatcatgtagaaaatgcatttgcataataatagtagcgtggcgtggccagcctc-ccct
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           3796 114 +      4941 atccccccttccctttgccagccacgtgtgcagtaaggagcagacaaaatggcaccaatcacgtagaaaatgcatttgcataataatagtagcgtggcgtggccagcctc-ccct
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        6512 114 +     35603 atccccgcttccctttgccagccacgtgtgcagtaaggagcagacaagatggcaccaatcacgtagaaaatgcatttgcataataatagtagcgtggcgtggccagcctc-ccct
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    27985 114 +     38576 atctccccttctctttgccagccacgtgtgcagtaaggagcagacaagatggcaccaatcacgtggaaagcccatttgcataataatagtgacctggcgtggccagcctc-ctct
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         24682 114 +     66356 atctccccttctctttgccagccacgtgtgcagtaaggagcagacaagatggcaccaatcacgtggaaagtccatttgcataataatagtgacctggcgtggccagcctc-ctct
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lophocebus_aterrimus.ctg367                              1436071 114 +   1826925 gtctccctttccctttgccagccacgtgtaggggaaggagcagacaagatggcaccggtcaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                               5883 110 +     40492 gtctccctttccctttgccagccacgtgta-ggggaagagcagacaagacggcaccggtcaagtggaaagtccctttgcataa---gattctggtggggcggccagcctt-cccc
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59675145 110 +  60120075 gtctccctttccctttgccagccacgtgta-ggggaagagcagacaagacggcaccggtcaagtggaaagtccatttgcataa---gattctggtggggcggccagcctt-cccc
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 11662 111 -     26193 gtctgcctttccctttgtcagccacgtgtacgggaaagagcagacaagacggcaccggtcaagtggaaagtccatttgcataa---gattctggtggggcggccagcctt-cccc
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            79445 111 -    114318 gtctccctttccctttgccagccacgtgtaggggaaagagcagacaagacggcaccggtcaagtggaaagtccatttgcataa---gattctggtggggcggccagcctt-cccc
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  5136 111 -     23192 gtctccctttccctttgtcagccacgtgtacgggaaagagcagacaagacggcaccggtcaagtggaaagtccatttgcataa---gattctggtggggcggccagcctt-cccc
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                14604 111 -     29190 gtctccctttccctttgtcagccacgtgtacaggaaggagcagacaagaccgcaccggtcaagtggaaagtccatttgcataa---gattctggtggggcggccagcctt-cccc
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  23169 111 +     37952 gtctccctttccctttgtcagccacgtgtacgggaaagagcagacaagacggcaccggtcaagtggaaagtccatttgcataa---gattctggtggggcggccagcctt-cccc
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186838260 111 + 187317192 GTctccctttccctttgtcagccacgtgtacgggaaagagcagacaagacggcaccggtcaagtggaaagtccatttgcataa---gattctggtggggcggccagcctt-cccc
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25456821 111 -  25927173 gtctccctttccctttGTcagccacgtgtacaggaaagagcagacaagaccgcaccggtcaagtggaaagtccatttgcatca---gattctggtggggcggccagcctt-cccc
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  79020 111 +     89720 gtctccctttccctttgtcagccacgtgtacgggaaagagcagacaagacggcaccggtcaagtggaaagtccatttgcataa---gattctggtggggcggccagcctt-cccc
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 6018 111 +     20474 gtctccctttccctttgccagccacgtgtacgggaaagagcagacaagacggcaccggtcaagtggaaagtccatttgcataa---gattctggtggggcggccagcctt-cccc
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   5818 111 -     14993 gtctccctttccctttgtcagccacgtgtacaggaaggagcagacaagaccgcaccggtcaagtggaaagtccatttgcataa---gattctggtggggcggccagcctt-cccc
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  328689 106 -    668171 gt-----tttccctttgtcagccacgtgtacaggaaggagcagacaagaccgcaccggtcaagtggaaagtccatttgcataa---gattctggtggggcggccagcctt-cccc
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 4130 110 -     24072 gtctccctttccccttcccagccacgtgta-ggggaagagcagacaagacggcaccggtcaagtggaaagtccatttgcataa---gattctggtggggcggccagcctt-cccc
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               24757 111 -     45290 gtctccctttccctttgtcagccacgtgtacgggaaagagcagacaagactgcaccggtcaagtggaaagtccatttgcataa---gattctggtggggcggccagcctt-cccc
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23936346 114 -  24302211 gtctccctttccctttgccagccacgtgtgggggaaggaacagacaagatggcaccggccaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               350474 114 +    752769 gtctccctttccctttgccagccacgtgtgggggaaggaacagacaagatggcaccggccaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Mico_argentatus.k141_1239457                                4752 114 -      7380 atctccccttccctttgccagccacatgtgcagtaaggagcagacaagatggcaccaatcacttggaaagtccatttgcataagaatagtagtgtggcgtggccagactc-ctct
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               3825 114 +     18990 atctccccttccctttgccagccacatgtgcagtaaggagcagacaagatggcaccaatcacttggaaagtccatttgcataagaatagtagtgtggcgtggccagactc-ctct
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      4764 114 -      7356 atctccccttccctttgccagccacatgtgcagtaaggagcagacaagatggcaccaatcacttggaaagtccatttgcataagaatagtagtgtggcgtggccagactc-ctct
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Miopithecus_ogouensis.k141_534055                           8069 114 -     28506 gtctccctttccctttgccagccaggtgtaggggaaggagcagacaagatggcaccggtcaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Nasalis_larvatus.k141_413338                               14063 113 +     21681 atctccctttccctttgccagccacatgtatgggaaggagcagacaagatggcaccgg-caagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Pan_paniscus.KQ411613.1                                    43001 114 +     80009 ATCTCCCTTTCCCTTTGCCAACCACATGTACAggaaggagcagacaagatggcaccGgtcaagtggaaagcccagttgcataataacgttagggtggggcggccagcctt-ctcc
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03002948.1                             18966 114 +     28717 ATCTCTCTTTCCCTTTGCCAACCACGTGTACaggaaggagcagacaagatggcaccggtcaagtggaaagcccaattgcataataacgttagggtggggcggccagcctt-ctcc
i Pan_troglodytes.NBAG03002948.1                         I 2712 I 2185
s Papio_anubis.CM001495.2                                183442094 114 + 183742232 GTCTCCCTTTCCctttgccagccacgtgtaggggaaggagcagacaaGATAGCACTGGTCAAGTGGAAagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             5792 114 +     20448 gtctccctttccctttgccagccacgtgtaggggaaggagcagacaagatagcactggtcaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20562600 114 +  20919399 gtctccctttccctttgccagccacgtgtagggaaaggagcagacaagatagcactggtcaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   4536 114 +     41871 gtctccctttccctttgccagccacgtgtaggggaaggagcagacaagatagcactggtcaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     7821 114 +     27711 gtctccctttccctttgccagccacgtgtaggggaaggagcagacaagatagcactggtcaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  7899 114 +      9205 gtctccctttccctttgccagccacgtgtaggggaaggagcagacaagatagcactggtcaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Papio_ursinus.k141_3428135                             C 0 C 0
s Piliocolobus_badius.k141_1234363                           42563 114 +     62158 atctccctttccctttgccagccacgtgtacgggaaggagcagacaagatggcacgggtcaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        37294 114 +     89929 atctccctttccctttgccagccacgtgtacgggaaggagcagacaagatggcacgggtcaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            38710 114 +     51399 atctccctttccctttgccagccacgtgtacgggaaggagcagacaagatggcacgggtcaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14294948 114 -  14605196 atctccctttccctttgccagccacgtgtacGggaaggagcagacaagatggcacgGGTCAAGTGGAAagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189130046 114 + 189387572 ATCTCCCTTTCCCTTTGCCAGCCACGTGTACaggaaggagcagacaagatggcaccCGTCAAGTGGAAAACTCaattgcataataagattagggtggggcggccagcctt-cccc
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9569654 114 +   9816681 atctccctttccctttgccagccacgtgtacaggaaggagcagacaagatggcacccgtcaagtggaaaactcaattgcataataagattagggtggggcggccagcctt-cccc
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               72235 114 -     81375 atctcccctgccctttgccagccacgtgtacgggaaggagcagacaagacggtaccggtcaagtggaaggtccatttgcataataagattctggtggggcggccagcctt-cccc
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              4055 114 +     19060 atctcccctgccctttgccagccacgtgtacgggaaggagcagacaagacggtaccggtcaagtggaaggtccatttgcataataagattctggtggggcggccagcctt-cccc
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Pygathrix_cinerea.k141_1153803                             14062 114 -     91421 atctccctttccctttgccagccacgtgtaccggaaggagcagacaagatgtcaccggtcaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7608185 114 +   7812017 atctccctttccctttgccagccacgtgtaccggaaggagcagacaagatgtcaccggtcaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             14033 114 -     72585 atctccctttccctttgccagccacgtgtaccggaaggagcagacaagatgtcaccggtcaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             5751 113 -     11128 atctccctttccctttgccagccacgtgtaggggaag-agcagacaagatggcaccggtcaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91235111 109 - 195417433 ATCTCCCTTTCCCTTTGCCA----CGTGTAGGGGAag-agcagacaagatggcactGGTCAAGTGGAAagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7670756 113 +   7961872 atctccctttccctttgccagccacgtgtaggggaag-agcagacaagatggcaccggtcaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_2619299                               7164 114 -      8359 atccccccttccctttgccagccacctttgcagtaaggagccggtaagatggcaccaatcacgtagaaaatgcatttgcataataatagtagcatggcgtggccagcctc-ccct
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_imperator.k141_2524406                             1118 114 +      2197 atccccgcttccctttgccagccacgtgtgcagtaaggagcagacaagatggcaccaatcacgtagaaaatgcatttgcataataatagtagcgtggcctggccagcctc-ccct
i Saguinus_imperator.k141_2524406                        C 0 C 0
s Saguinus_inustus.k141_699149                               12540 114 +     13640 atccccgcttccctttgccagccacgtgtgcagtaaggagcagacaagatggcaccaatcacgtagaaaatgcatttgcataataatagtagcgtggcctggccagcctc-ccct
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               7404 114 +      8564 atccccgcttccctttgccagccacgtgtgcagtaaggagcagacaagatggcaccaatcacgtagaaaatgcatttgcataataatagtagcatggcctggccagcctc-ccct
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209468239 114 + 209938924 atccccccttccctttgccagccacctttgcagtaaggagccgataagatggcaccaatcacgtagaaaatacatttgcataataatagtagcgtggcgtggccagcctc-cccg
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 6966 114 -      9399 atccccgcttccctttgccagccacgtgtgcagtaagcagcagacaagatggcaccaatcacgtagaaaatgcatttgcataataatagtagcgtggcctggccagcctc-ccct
i Saguinus_mystax.k141_374627                            C 0 C 0
s Sapajus_apella.ctg103                                    5419635 107 -   5703754 gtct-cccttccctttgccagccacatgtgcagtaaggagcagac--gatggcaccaatcacgcggaaagtccttttgcataatgacattagggtggcgtg----gcctc-ctct
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          54676 107 -     80660 gtct-cccttccctttgccagccacatgtgcagtaaggagcagac--gatggcaccaatcacgcggaaagtccttttgcataatgacattagggtggcgtg----gcctc-ctct
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Semnopithecus_entellus.k141_11662                          18572 114 -     19888 atctccctttccctttgccagccacgtgtacgggaaggagcagacaagatggcaccggtcaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      25775 114 +     39453 atctccctttccctttgccagccacgtgtacgggaaggagcagacaagatggcaccggtcaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            6294 114 +     27826 atctccctttccctttgccagccacgtgtacgggaaggagcagacaagatggcaccggtcaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             5814 115 -     19483 atctccctttccctttgccagccacgtgtccgggaaggagcagacaagatggcaccggtcaagtggaaagtccatttgcataataagattctggtggggcggccagccttccccc
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      5883 114 +      7198 atctccctttccctttgccagccacgtgtacgggaaggagcagacaagatggcaccggtcaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         14141 114 +     15514 atctcccctgccctttgccagccacgtgtacgggaaggagcagacaagatggcgccggtcaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1092357 114 -   1523678 atctcccttttcctttgccagccacgcatacaggaaggagcagacaagatggcacaggtcaagtggaaagcccaattgcataataacattagggtggggcggccagcctt-ccct
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Theropithecus_gelada.CM009954.1                        186427464 114 + 186847797 GTCTCCCTTTCCCTTTGCCAGCCACGTGTAGGggaaggagcagacaagatggcaccGGTCAAGTGGAAagtccatttgcataataagattctGgtggggcggccagcctt-cccc
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          9866 114 -     20410 atctccctttccctttgccagccacgtgtacgggaaggagcagacaagatggcaccggtcaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    14062 114 +     15221 atctccctttccctttgccagccacgtgtacgggaaggagcagacaagatggcaccggtcaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                        9967 114 +     19930 atctccctttccctttgccagccacgtgtacgggaaggagcagacaagatggcaccggtcaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       6394 114 -     19997 atctccctttccctttgccagccacgtgtacgggaaggagcagacaagatggcaccggtcaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            46522 110 -     60166 atctcccctgccgtttgccagccacgtgtacaggaaggagcagacacgatggcaccggtcaagtggaaagtccatttgcgtaataagattctggtggggcggccagcctt-----
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        13989 114 -     27529 atctccctttccctttgccagccacgtgtacgggaaggagcagacaagatggcaccggtcaagtggaaagtccatttgcataagaagattctggtggggcggccagcctt-cccc
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     13933 114 -     18194 atctccctttccctttgccagccacgtgtacgggaaggagcagacaagatggcaccggtcaagtggaaagtccatttgcataataagattctggtggggcggctagcctt-cccc
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           7661 114 -     21137 atctccctttccctttgccagccacgtgtacgggaaggagcagacaagatggcaccggtcaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    6364 114 -     10723 atctccctttccctttgccagccacgtgtacgggaaggagcagacaagatggcaccggtcaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         5520 114 +      9834 atctccctttccctttgccagccacgtgtacgggaaggagcagacaagatggcaccggtcaagtggaaagtccatttgcataataagattctggtggggcggctagcctt-cccc
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        23833 114 +     32220 atctccctttccctttgccagccacgtgtacgggaaggagcagacaagatggcaccggtcaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5937935 114 +   6242583 atctccctttccctttgccagccacgtgtacgggaaggagcagacaagatggcaccggtcaagtggaaagtccatttgcataataagattctggtggggcggccagcctt-cccc
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        7187 114 +     20839 atctccctttccgtttgccagccacgtgtacgggaaggagcagacacgatggcaccggtcaagtggaaagtccatttgcgtaataagattctggtggggcggccagcctt-cccc
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
e Echinops_telfairi.JH980293.1                            48779651 164 + 111700974 I
e Otolemur_garnettii.GL873799.1                             695356   0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         3192   0 +      8798 C
e Galago_senegalensis.k141_631886                             3367   0 +     11339 C
e Galago_moholi.ctg2040                                     425660   0 -    453645 C
e Saimiri_ustus.k141_1484609                                 22654   3 -     61129 I
e Saimiri_sciureus.k141_2278166                               2395   0 -     23631 C
e Saimiri_oerstedii.k141_1487881                             39389   0 -     64574 C
e Saimiri_macrodon.k141_716185                               22761   0 +     45824 C
e Saimiri_cassiquiarensis.k141_2188234                       22666   0 +     46362 C
e Saimiri_boliviensis.NW_024100920.1                     119950210   0 - 121099817 C
e Mus_pahari.LT608297.1                                   31354391   3 -  89631738 I
e Mus_spretus.CM004101.1                                  90751796   3 - 130317789 I
e Mus_musculus.chr8                                       87649735   3 - 129401213 I
e Mus_caroli.LT608237.1                                   84360735   3 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Loris_tardigradus.ctg83                                  1003896   0 +   6120653 C
e Loris_lydekkerianus.k141_2539221                            5046   0 +     11245 C
e Perodicticus_potto.k141_1092580                             7743   0 +     25941 C
e Perodicticus_ibeanus.k141_855320                            9341   0 +     13100 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276   0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      14314   3 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_17732          4470   0 +     86975 C
e Xerus_inauris.XerIna_scaffold_48378                        23707  30 -     24430 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 10099   0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5371183   0 -   5488506 C
e Varecia_variegata.k141_1128296                             10881   0 +     24756 C
e Varecia_rubra.k141_590885                                  10826   0 +     50397 C
e Ursus_maritimus.KK499267.1                               4849738   0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   52652   8 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584   0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     8640   0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2154992   0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641   0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     80241   0 +    610378 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   3761   0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937   0 +    114563 C
e Tarsius_wallacei.k141_254427                                 579   0 -     16117 C
e Tarsius_lariang.k141_2201908                               25744   0 +     70052 C
e Tapirus_terrestris.TapTer_scaffold_755                    386522   0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      118069   0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 71444   0 +    116680 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                 9911   0 +     41958 C
e Sus_scrofa.CM000828.4                                    6809803   0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629              17619   0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             30035   0 +     97271 C
e Spermophilus_dauricus.KZ294078.1                         1952501  34 -   3870691 I
e Sorex_araneus.JH798187.1                                13649961   0 -  18376816 C
e Solenodon_paradoxus.SolPar_flattened_line_126               3065   0 +   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_60841                    11304   0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152480   8 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                87100   0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660   0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570009   3 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968   0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20273641   0 -  38429054 C
e Pteropus_vampyrus.KN525825.1                             1359168   0 +   4952924 C
e Pteropus_alecto.KB030862.1                              22976082   0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         39533   0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            13999   0 -     21811 C
e Psammomys_obesus.NESX01036370.1                             9765   3 -     21651 I
e Propithecus_verreauxi.k141_956661                           4204   0 -      6182 C
e Propithecus_tattersalli.k141_790011                        27982   0 -     67325 C
e Propithecus_perrieri.k141_1200571                           4160   0 -     24134 C
e Propithecus_edwardsi.k141_1176054                          25972   0 +     35766 C
e Propithecus_diadema.k141_58108                               496   0 -     13098 C
e Propithecus_coronatus.k141_347390                          28451   0 +     38485 C
e Propithecus_coquerelli.NW_012148875.1                     990141   0 +   2598838 C
e Prolemur_simus.MPIZ01000396.1                            2596171   0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                 12252   8 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090   0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             1144   0 +     22620 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384   0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813   0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18194143   3 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690  60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11948   0 -     78924 C
e Pantholops_hodgsonii.KE114653.1                          1265385   0 -   2937107 C
e Panthera_tigris.KE722367.1                               4720331   0 -   8748460 C
e Panthera_pardus.KV860321.1                                263693   0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  150487   0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468   0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491   0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       461654   0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                        67146393   0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               9108   0 -     18566 C
e Orcinus_orca.KB316932.1                                  2782345   0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    79522   3 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                    3605   3 -     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229   0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831   4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              505962   0 -   2017862 C
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1362720   0 +   3988456 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749294   0 + 199412804 C
e Nycticebus_coucang.k141_771082                               718   0 -      2667 C
e Nycticebus_bengalensis.LG01                            102578873   0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9148686   0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183   0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422   0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20306277   0 +  31847680 C
e Nannospalax_galili.KL204047.1                            2033219   3 -   3037898 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              188089   0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33307   0 +     33610 C
e Myotis_lucifugus.GL429869.1                              3902752   0 -   4330536 C
e Myotis_davidii.KB100139.1                                1586680   0 -   6019432 C
e Myotis_brandtii.KE162005.1                                278987   0 -  10118263 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               300511   0 -  14710649 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           5814   0 +     14753 C
e Mungos_mungo.MunMun_flattened_line_23663                   34730   0 +     37127 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379  13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 140657   0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    27466   0 -    437263 C
e Mirza_zaza.k141_952172                                      8439   0 -     37649 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         5023   0 -      8324 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33619   0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849942   0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                14711   0 -     19307 C
e Microgale_talazaci.MicTal_scaffold_6613                    20915   0 -    145209 C
e Microcebus_murinus.CM007674.1                           18290893   0 -  93316391 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961   0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12181614   3 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 32131   3 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365              9333   0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                         9635   3 -    207569 I
e Marmota_marmota.CZRN01000018.1                          33101614  35 -  40650429 I
e Manis_pentadactyla.KN006162.1                              50341   0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352   0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 89911   0 +     94391 C
e Lycaon_pictus.CM007581.1                                17954432   0 -  59628241 C
e Loxodonta_africana.GL010049.1                            4216402   0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344   0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     5564   0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3042155   0 +   3914936 C
e Lepilemur_septentrionalis.k141_185316                      26379   0 +     54090 C
e Lepilemur_ruficaudatus.k141_121139                           988   0 +     25010 C
e Lepilemur_dorsalis.k141_577674                             28443   0 +     45836 C
e Lepilemur_ankaranensis.k141_596936                         10377   0 -     23766 C
e Lemur_catta.scaffold_24                                 15523493   0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    13159   0 -     42476 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650   0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493   0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293   0 +     23964 C
e Indri_indri.k141_3655594                                   21945   0 +     31101 C
e Ictidomys_tridecemlineatus.JH393364.1                    7519304  37 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      81626   0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547   0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  43778   0 +     55795 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604   0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173   0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577   3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_596025                  53   8 +       452 I
e Heterocephalus_glaber.JH602082.1                        20660051   0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516   0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               241618   0 +    327341 C
e Hapalemur_occidentalis.k141_907772                         12988   0 -     16460 C
e Hapalemur_meridionalis.k141_248335                         13150   0 -     41752 C
e Hapalemur_griseus.k141_1511508                             13049   0 +     18253 C
e Hapalemur_gilberti.k141_488810                             11410   0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           6261   0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312   0 -    660261 C
e Galeopterus_variegatus.GalVar_scaffold_108840                487   0 -      9135 C
e Galagoides_demidoff.k141_1711393                             670   0 +     41679 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  8642   0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20195128   0 + 205367284 C
e Eulemur_sanfordi.k141_1122526                              13181   0 +    111500 C
e Eulemur_rufus.k141_1476633                                  3606   0 -     17153 C
e Eulemur_rubriventer.k141_571033                            12988   0 +     26496 C
e Eulemur_mongoz.k141_232305                                 10068   0 +     97555 C
e Eulemur_macaco.k141_1562045                                12132   0 +     75513 C
e Eulemur_fulvus.k141_544389                                 13371   0 +     23973 C
e Eulemur_flavifrons.k141_1184614                            12132   0 +     26330 C
e Eulemur_coronatus.k141_885031                              14932   0 -     25546 C
e Eulemur_collaris.k141_377015                                5904   0 -     16928 C
e Eulemur_albifrons.k141_342033                              13205   0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689   0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752   0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Equus_przewalskii.KK951119.1                               32494   0 +    498745 C
e Equus_caballus.CM000403.2                               18530479   0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1282658   0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2144750   0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16328616   0 -  41312741 C
e Ellobius_talpinus.LOJH01109367.1                             607   3 +      6299 I
e Ellobius_lutescens.LOEQ01008920.1                          90425   3 +    110024 I
e Elephantulus_edwardii.JH947257.1                         1090636   0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347   0 +    607251 C
e Eidolon_helvum.KE759718.1                                   9826   0 +     11740 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175   0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084   0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    5348   0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  672595   0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8629170   0 +  20541912 C
e Delphinapterus_leucas.KZ290073.1                        16812076   0 +  35494412 C
e Daubentonia_madagascariensis.ctg71                      12536717   0 -  12879189 C
e Dasypus_novemcinctus.JH564415.1                            62473   5 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923   0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569   0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    836510   0 +   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129             27783   0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_37019               1902   0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11666932   3 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 49454   3 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          13616   0 -     20389 C
e Condylura_cristata.JH655891.1                           17547413   8 -  53390261 I
e Colobus_guereza.LG01                                   199948958   0 + 200372422 C
e Choloepus_hoffmanni.KN194906.1                            172269   0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 17169   0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498   0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           15854   0 +     57038 C
e Cheirogaleus_major.k141_333249                             20487   0 -     52598 C
e Chaetophractus_vellerosus.ChaVel_scaffold_713168             206   0 -      2554 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1772   0 -     25243 C
e Cephalopachus_bancanus.k141_1423433                         4751   0 +     31688 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291   0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417   0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157   0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     92315   0 +    217609 C
e Castor_canadensis.CasCan_scaffold_2074                    136758   0 +    179628 C
e Carollia_perspicillata.CarPer_scaffold_92756                4154   0 -     11696 C
e Carlito_syrichta.NW_007247396.1                           200736   0 +    308752 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030   0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310   0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18499704   0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17958192   0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9033927   0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    184541   0 -    185531 C
e CanFam4.chr16                                           17798484   0 -  60362399 C
e Camelus_ferus.KB017975.1                                  402438   0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2334155   0 -   7040546 C
e Camelus_bactrianus.KN276810.1                           10001697   0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2819682   0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014   0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932   0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376   0 +  48749331 C
e Bison_bison.KN261452.1                                    200171   0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115   0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905   0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440   0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              53729   0 +     85213 C
e Avahi_laniger.k141_765380                                  53100   0 -     92717 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3791   0 +     43469 C
e Arctocebus_calabarensis.k141_2318572                       10712   0 +     14667 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      11194  23 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675   0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      184379   0 +    412891 C
e Ammotragus_lervia.NIVO01071767.1                          676192   0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74034   3 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             78649   0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9509878   0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_11939                     24695   3 -     89785 I
e Acinonyx_jubatus.LLWD01001279.1                           826634   0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       5767 41 +     62944 tcatgctatgtaaacctcacacctgatataaccaatctgtg
s Allenopithecus_nigroviridis.k141_3361533                   13685 41 -     52922 aaatactgtgtaaacctcacacctgacataaccagtctgtg
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         13626 41 -     28001 gcatactgtgtaaacctcacacctgatataaccagtctgtg
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          4072 41 -     18505 gcatactgtgtaaacctcacacctgatataaccagtctgtg
i Allochrocebus_preussi.k141_1442296                     C 0 I 54
s Allochrocebus_solatus.k141_166128                           4975 41 -     12518 gcatactgtgtaaacctcacacctgatataacccgtctgtg
i Allochrocebus_solatus.k141_166128                      I 54 C 0
s Alouatta_belzebul.k141_3238538                              2440 41 -     27731 gcacgctgtgtaagtgtcacacctgatcagagcaatgtgtg
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                2569 41 +      3134 gcacgctgtgtaaatgtcacacctgatcaaagcaatgtgtg
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               2700 41 -     45847 gcacgctgtgtaaatgtcacacctgatcagagcaatgtgtg
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_2469512                                  104 41 +      1018 gcatgctgtgtaaatgtcacacctgatcaaaccaatctgtg
i Alouatta_juara.k141_2469512                            n 41 I 313
s Alouatta_nigerrima.k141_3472759                            17204 41 -     18578 gcatgctgcgtaaatgtcacacctgatcaaaccactctgtg
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              2593 41 +     47717 gcatgctacgtaaatgtcacacctgatcaaaccaatctgtg
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             2705 41 -      3544 gcatgctgtgtaaatgtcacacctgatcaaaccaatgtgtg
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             13926 41 +     50774 gcatgctgtgtaaatgtcacacctgatcaaaccaatgtgtg
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  14578 41 -     33861 gcatgctgtgtaaacgtcacacctgatcaagccaatctgcg
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            14598 41 -     34016 gcatgctgtgtaaacgtcacacctgatcaaaccaatctgcg
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4296995 41 -   5030052 gcatgctgtgtaaacgtcacacctgatcaaaccaatctgcg
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             14600 41 -     34685 gcatgctgtgtaaacgtcacacctgatcaaaccaatctgcg
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               27724 41 -     47192 gcatgctgtgtaaacgtcacacctgatcaaaccaatctgcg
i Aotus_vociferans.k141_344750                           C 0 C 0
s Callibella_humilis.k141_1278103                             4326 38 -     10423 gcatgctgtgtaaacctcacacctgatctaa---atctgcg
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             23803 37 +     31915 gcgtgctgtgtaaag-tcacacctgatcaaa---atctgcg
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            4292 38 +      5267 gcatgctgtgtaaacctcacacctgatctaa---atctgcg
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23589506 38 - 189096842 gcatgctgtgtaaacctcacacctgatctaa---ATCTGCG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             11036 38 -     12001 gcatgctgtgtaaacctcacacctgatctaa---atctgcg
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Cebuella_niveiventris.k141_1251222                          8951 38 -     11392 gcatgctgtgtaaacctcacacctgatctaa---atctgcg
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               5049 38 -      7577 gcatgctgtgtaaacctcacacctgatctaa---atctgcg
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25651078 41 +  26074798 gcatgctgtataaacgtcacgcctgatcaaaccaatctgca
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_398305                                  655 41 +      1777 gcatgctgtgtaaacgtcatgcctgatcaaaccaatctgca
i Cebus_olivaceus.k141_398305                            C 0 I 226
s Cebus_unicolor.k141_544048                                 48986 41 -     74725 gcatgctgtgtaaacgtcacgcctgatcaaaccaatctgca
i Cebus_unicolor.k141_544048                             C 0 C 0
s Cercocebus_atys.KQ010504.1                               4474638 41 +   4669795 gcacgctgtgtaaacctcacacctgatataaccagtctgtg
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        13187 41 -     19203 gcacgctgtgtaaacctcacacctgatataaccagtctgtg
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           7609 41 +      8260 gcatgctgtgtaaacctcacacctgatataaccagtctgtg
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           7835 41 +     27781 gcacgctgtgtaaacctcacacctgatataaccagtctgtg
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         7995 41 -     20310 gcatcctgtgtaaacctcacacctgatataaccagtctgtg
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          10974 41 +     29689 gcatcctgtgtaaacctcacacctgatataaccagtctgtg
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            5403 41 +      9989 gcatccggtgtaaacctcacacctgatataaccagtctgtg
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          13653 41 -     27936 gcatcctgtgtaaacctcacacctgatataaccagtctgtg
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            2519 41 -     17152 gcatactgtgtaaacctcacacctgatataaccagtctgtg
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38816057 41 +  39242232 gcatcctgtgtaaacctcacacctgatataaccagtctgtg
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21221748 41 -  21565898 gcatactgtgtaaacctcacacctgatataaccagtctgtg
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       38866 41 -     53127 gcatactgtgtaaacctcacacctgatataaccagtctgtg
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        6138 41 +      7159 gcatcctgtgtaaacctcacacctgatataaccagtctgtg
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       13669 41 -     27947 gcatactgtgtaaacctcacacctgatataaccagtctgtg
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         13642 41 +     17596 gcatactgtgtaaacctcacacctgatataaccagtctgtg
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          2876 41 +     26000 gcatccggtgtaaacctcacacctgatataaccagtctgtg
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Chiropotes_albinasus.k141_2813271                          10215 38 +     11226 gcatgctgtgtaaacctcacacctgatcaaa---atctgcg
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18427626 41 -  18827391 gcatactgtgtaaacctcacacctgatataaccagtctgtg
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       14063 41 -     50209 gcatactgtgtaaacctcacacctgatataaccagtctgtg
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135421063 41 + 135778131 gcatactgtgtaaacctcacacctgatataaccagtctgtg
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1909579 41 +   2368649 gcatactatgtaaacctcacacctgacataaccagtctgtg
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_polykomos.k141_906115                              36117 41 +     84244 gcatactatgtaaacctcacacctgacataaccagtctgtg
i Colobus_polykomos.k141_906115                          C 0 C 0
s Erythrocebus_patas.Contig38                             21204234 41 -  21539334 gcatactgtgtaaacctcacacctgatataaccagtctgtg
i Erythrocebus_patas.Contig38                            C 0 C 0
s Gorilla_beringei.k141_3596273                              15022 41 -     32273 tcatgctatgtaaacctcacacctgatataaccaatctgtg
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186337168 41 + 186649187 tcatgctatgtaaacctcacacctgatataaccaatctgtg
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hoolock_leuconedys.ctg274                                    433836 41 +    630532 gcatgctatgtaaacctcacacctgatataaccaatctgtg
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_232023                                1602 41 -     12752 gcatgctatgtaaacctcacacctgatataaccaatctgtg
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                               1646 41 +     14092 gcatgctatgtaaacctcacacctgatataaccaatctgtg
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189542429 41 - 191637585 gcatgctatgtaaacctcacacctgaaataaccaatctatg
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3335323 41 -  11177569 gcatgctatgtaaacctcacacctgatataactaatctgtg
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        6583 38 +     64341 gcatgctgtgtaaacctcacacctgatcaaa---atctgcg
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           3910 38 +      4941 gcatgctgtgtaaacctcacacctgatcaaa---atctgcg
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        6626 38 +     35603 gcatgctgtgtaaacctcacacctgatcaaa---atctgcg
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    28099 38 +     38576 gcatgctgtgtaaacgtcacacctgatcaca---atctgcg
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         24796 38 +     66356 gcatgctgtgtaaacgtcacacctgatcaca---atctgcg
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lophocebus_aterrimus.ctg367                              1436185 41 +   1826925 gcacgctgtgtaaacctcacacctgatataaccagtctgtg
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                               5993 41 +     40492 gcacgctgtgtaaacctcacacctgatgtaaccagtcggtg
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59675255 41 +  60120075 gcacgctgtgtaaacctcacacctgatgtaaccagtctgtg
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 11773 41 -     26193 gcacgctgtgtaaacctcacacctgatgtaaccagtctgtg
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            79556 41 -    114318 gcaggctgtgtaaacctcacacctgatataaccagtctgtg
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  5247 41 -     23192 gcacgctgtgtaaacctcacacctgatgtaaccagtctgtg
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                14715 41 -     29190 gcacgctgtgtaaacctcacacctgatataaccagtcggtg
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  23280 41 +     37952 gcaggctgtgtaaacctcacacctgatataaccagtcggtg
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186838371 41 + 187317192 gcacgctgtgtaaacctcacacctgatataaccagtctgtg
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25456932 41 -  25927173 gcacgctgtgtaaacctcacacctgatataaccagtcggtg
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  79131 41 +     89720 gcaggctgtgtaaacctcacacctgatataaccagtcggtg
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 6129 41 +     20474 gcacgctgtgtaaacctcacacctgatataaccagtctgtg
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   5929 41 -     14993 gcacgctgtgtaaacctcacacctgatataaccagtcggtg
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  328795 41 -    668171 gcacgctgtgtaaacctcacacctgatacaaccagtcggtg
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 4240 41 -     24072 gcacgctgtgtaaacctcacacctgatgtaaccagtcggtg
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               24868 41 -     45290 gcaggctgtgtaaacctcacacctgatataaccagtcggtg
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23936460 41 -  24302211 gcacgctgtgtaaacctcacacctgatataaccagtctgtg
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               350588 41 +    752769 gcacgctgtgtaaacctcacacctgatataaccagtctgtg
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Mico_argentatus.k141_1239457                                4866 38 -      7380 gcatgctgtgtaaacctcacacctgatctaa---atctgcg
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               3939 38 +     18990 gcatgctgtgtaaacctcacacctgatctaa---atctgcg
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      4878 38 -      7356 gcatgctgtgtaaacctcacacctgatctaa---atctgcg
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Miopithecus_ogouensis.k141_534055                           8183 40 -     28506 gcatactgtgtaa-cctcacacctgatataaccagtctgtg
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Nasalis_larvatus.k141_413338                               14176 41 +     21681 gcatactatgtaaacctcacacctgatataaccagtctgtg
i Nasalis_larvatus.k141_413338                           C 0 I 91
s Pan_paniscus.KQ411613.1                                    43115 41 +     80009 tcatgctatgtaaacctcacacctgatataaccaatctgtg
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189142024 41 + 189151597 tcatgctatgtaaacctcacacctgatataaccaatctgtg
i Pan_troglodytes.CM009242.2                             I 113 I 234
s Papio_anubis.CM001495.2                                183442208 41 + 183742232 gcacgctgtgtaaacctcacacctgatataaccagtctgtg
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             5906 41 +     20448 gcacgctgtgtaaacctcacacctgatataaccagtctgtg
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20562714 41 +  20919399 gcacgctgtgtaaacctcacacctgatataaccagtctgtg
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   4650 41 +     41871 acacgctgtgtaaacctcacacctgatataaccagtctgtg
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     7935 41 +     27711 gcacgctgtgtaaacctcacacctgatataaccagtctgtg
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  8013 41 +      9205 gcacgctgtgtaaacctcacacctgatataaccagtctgtg
i Papio_ursinus.k141_3428135                             C 0 C 0
s Piliocolobus_badius.k141_1234363                           42677 41 +     62158 gcataccatgtaaacctcacacctgatataaccagtctgtg
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        37408 41 +     89929 gcataccatgtaaacctcacacctgatataaccagtctgtg
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            38824 41 +     51399 gcataccatgtaaacctcacacctgatataaccagtctgtg
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14295062 41 -  14605196 gcataccatgtaaacctcacacctgatataaccagtctgtg
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189130160 41 + 189387572 tcatgctatgtaaacttcacacctgatataaccaatctatg
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9569768 41 +   9816681 tcatgctatgtaaacttcacacctgatataaccaatctatg
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               72349 41 -     81375 gcatactatgtaaacctcacacctgatataaccagtctgtg
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              4169 41 +     19060 acatactatgtaaacctcacacctgatataaccagtctgtg
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Pygathrix_cinerea.k141_1153803                             14176 41 -     91421 gcatactatgtaaacctcacacctgatataaccagtctgtg
i Pygathrix_cinerea.k141_1153803                         C 0 I 91
s Pygathrix_nigripes_b.ctg100                                 7608299 41 +   7812017 gcatactatgtaaacctcacacctgatataaccagtctgtg
i Pygathrix_nigripes_b.ctg100                               C 0 I 91
s Pygathrix_nigripes_a.k141_215492                             14147 41 -     72585 gcatactatgtaaacctcacacctgatataaccagtctgtg
i Pygathrix_nigripes_a.k141_215492                         C 0 I 91
s Rhinopithecus_bieti.k119_217274                             5864 41 -     11128 gcatactgtgtaaacctcacacctgatataaccagtctgtg
i Rhinopithecus_bieti.k119_217274                        C 0 I 91
s Rhinopithecus_roxellana.NC_044550.1                     91235220 41 - 195417433 gcatactgtgtaaacctcacacctgatataaccagtctgtg
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 91
s Rhinopithecus_strykeri.ctg102                            7670869 41 +   7961872 gcatactgtgtaaacctcacacctgatataaccagtctgtg
i Rhinopithecus_strykeri.ctg102                          C 0 I 91
s Saguinus_bicolor.k141_2619299                               7278 38 -      8359 gcatgctgtgtaaacctcacacctgatcaaa---atctgcg
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_imperator.k141_2524406                             1232 38 +      2197 gcatgctgtgtaaacctcacacctgaacaaa---atctgcg
i Saguinus_imperator.k141_2524406                        C 0 C 0
s Saguinus_inustus.k141_699149                               12654 38 +     13640 gcatgctgtgtaaacctcacacctgatcaaa---atctgcg
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               7518 38 +      8564 gcatgctgtgtaaacctcacacctgatcaaa---atctgcg
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209468353 38 + 209938924 gcatgctgtgtaaacctcacacctgatcaaa---atctgcg
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 7080 38 -      9399 gcatgctgtgtaaacctcacacctgatcaaa---atctgcg
i Saguinus_mystax.k141_374627                            C 0 C 0
s Sapajus_apella.ctg103                                    5419742 41 -   5703754 gcatgctgtgtaaacgtcacgcctgatcaaaccaatctgca
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          54783 41 -     80660 gcatgctgtgtaaacgtcacgcctgatcaaaccaatctgca
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Semnopithecus_entellus.k141_11662                          18686 41 -     19888 gcatactatgtaaacctcacacctgatgtaaccagtctgtg
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      25889 41 +     39453 gcatactatgtaaacctcacacctgatgtaaccagtctgtg
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            6408 41 +     27826 gcatactatgtaaacctcacacctgatgtaagcagtctgtg
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             5929 41 -     19483 gcatactatgtaaacctcacacctgatgtaaccagtctgtg
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      5997 41 +      7198 gcatactatgtaaacctcacacctgatgtaaccagtctgtg
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         14255 41 +     15514 gcatactatgtaaacctcacacctgatgtaaccagtctgtg
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1092471 41 -   1523678 gcatgctatgtaaacctcacacctgatataaccaatctgtg
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Theropithecus_gelada.CM009954.1                        186427578 41 + 186847797 gcatgctgtgtaaacctcacacctgatataaccagtctgtg
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                          9980 41 -     20410 gcatactatgtaaacctcacacctgatgtaaccagtctgtg
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    14176 41 +     15221 gcatactatgtaaacctcacacctgatgtaaccagtctgtg
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                       10081 41 +     19930 gcatactatgtaaacctcacacctgatgtaaccagtctgtg
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       6508 41 -     19997 gcatactatgtaaacctcacacctgatgtaaccagtctgtg
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            46632 41 -     60166 acatgctatgtaaacctcacacctgatgtaaccagtctgtg
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        14103 41 -     27529 gcatactatgtaaacctcacacctgatgtaaccagtctgtg
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     14047 41 -     18194 gcatactatgtaaacctcacacctgatgtaaccagtctgtg
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           7775 41 -     21137 gcatactatgtaaacctcacacctgatgtaaccagtctgtg
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    6478 41 -     10723 gcatactatgtaaacctcacacctgatgtaaccagtctgtg
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         5634 41 +      9834 gcatactatgtaaacctcacacctgatgtaaccagtctgtg
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        23947 41 +     32220 gcatactatgtaaacctcacacctgatgtaaccagtctgtg
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5938049 41 +   6242583 gcatactatgtaaacctcacacctgatgtaaccagtctgtg
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        7301 41 +     20839 gcatactatgtaaacctcacacctgatgtaaccagtctgtg
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
e Echinops_telfairi.JH980293.1                            48779651 164 + 111700974 I
e Otolemur_garnettii.GL873799.1                             695356  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         3192  0 +      8798 C
e Galago_senegalensis.k141_631886                             3367  0 +     11339 C
e Galago_moholi.ctg2040                                     425660  0 -    453645 C
e Saimiri_ustus.k141_1484609                                 22654  3 -     61129 I
e Saimiri_sciureus.k141_2278166                               2395  0 -     23631 C
e Saimiri_oerstedii.k141_1487881                             39389  0 -     64574 C
e Saimiri_macrodon.k141_716185                               22761  0 +     45824 C
e Saimiri_cassiquiarensis.k141_2188234                       22666  0 +     46362 C
e Saimiri_boliviensis.NW_024100920.1                     119950210  0 - 121099817 C
e Mus_pahari.LT608297.1                                   31354391  3 -  89631738 I
e Mus_spretus.CM004101.1                                  90751796  3 - 130317789 I
e Mus_musculus.chr8                                       87649735  3 - 129401213 I
e Mus_caroli.LT608237.1                                   84360735  3 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Loris_tardigradus.ctg83                                  1003896  0 +   6120653 C
e Loris_lydekkerianus.k141_2539221                            5046  0 +     11245 C
e Perodicticus_potto.k141_1092580                             7743  0 +     25941 C
e Perodicticus_ibeanus.k141_855320                            9341  0 +     13100 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      14314  3 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_17732          4470  0 +     86975 C
e Xerus_inauris.XerIna_scaffold_48378                        23707 30 -     24430 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 10099  0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5371183  0 -   5488506 C
e Varecia_variegata.k141_1128296                             10881  0 +     24756 C
e Varecia_rubra.k141_590885                                  10826  0 +     50397 C
e Ursus_maritimus.KK499267.1                               4849738  0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   52652  8 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     8640  0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2154992  0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     80241  0 +    610378 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   3761  0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Tarsius_wallacei.k141_254427                                 579  0 -     16117 C
e Tarsius_lariang.k141_2201908                               25744  0 +     70052 C
e Tapirus_terrestris.TapTer_scaffold_755                    386522  0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      118069  0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 71444  0 +    116680 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                 9911  0 +     41958 C
e Sus_scrofa.CM000828.4                                    6809803  0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629              17619  0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             30035  0 +     97271 C
e Spermophilus_dauricus.KZ294078.1                         1952501 34 -   3870691 I
e Sorex_araneus.JH798187.1                                13649961  0 -  18376816 C
e Solenodon_paradoxus.SolPar_flattened_line_126               3065  0 +   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_60841                    11304  0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152480  8 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                87100  0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570009  3 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20273641  0 -  38429054 C
e Pteropus_vampyrus.KN525825.1                             1359168  0 +   4952924 C
e Pteropus_alecto.KB030862.1                              22976082  0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         39533  0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            13999  0 -     21811 C
e Psammomys_obesus.NESX01036370.1                             9765  3 -     21651 I
e Propithecus_verreauxi.k141_956661                           4204  0 -      6182 C
e Propithecus_tattersalli.k141_790011                        27982  0 -     67325 C
e Propithecus_perrieri.k141_1200571                           4160  0 -     24134 C
e Propithecus_edwardsi.k141_1176054                          25972  0 +     35766 C
e Propithecus_diadema.k141_58108                               496  0 -     13098 C
e Propithecus_coronatus.k141_347390                          28451  0 +     38485 C
e Propithecus_coquerelli.NW_012148875.1                     990141  0 +   2598838 C
e Prolemur_simus.MPIZ01000396.1                            2596171  0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                 12252  8 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             1144  0 +     22620 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18194143  3 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11948  0 -     78924 C
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Panthera_tigris.KE722367.1                               4720331  0 -   8748460 C
e Panthera_pardus.KV860321.1                                263693  0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  150487  0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       461654  0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                        67146393  0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               9108  0 -     18566 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    79522  3 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                    3605  3 -     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              505962  0 -   2017862 C
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1362720  0 +   3988456 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749294  0 + 199412804 C
e Nycticebus_coucang.k141_771082                               718  0 -      2667 C
e Nycticebus_bengalensis.LG01                            102578873  0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9148686  0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20306277  0 +  31847680 C
e Nannospalax_galili.KL204047.1                            2033219  3 -   3037898 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              188089  0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33307  0 +     33610 C
e Myotis_lucifugus.GL429869.1                              3902752  0 -   4330536 C
e Myotis_davidii.KB100139.1                                1586680  0 -   6019432 C
e Myotis_brandtii.KE162005.1                                278987  0 -  10118263 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               300511  0 -  14710649 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           5814  0 +     14753 C
e Mungos_mungo.MunMun_flattened_line_23663                   34730  0 +     37127 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 140657  0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Mirza_zaza.k141_952172                                      8439  0 -     37649 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         5023  0 -      8324 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33619  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849942  0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                14711  0 -     19307 C
e Microgale_talazaci.MicTal_scaffold_6613                    20915  0 -    145209 C
e Microcebus_murinus.CM007674.1                           18290893  0 -  93316391 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12181614  3 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 32131  3 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365              9333  0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                         9635  3 -    207569 I
e Marmota_marmota.CZRN01000018.1                          33101614 35 -  40650429 I
e Manis_pentadactyla.KN006162.1                              50341  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352  0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 89911  0 +     94391 C
e Lycaon_pictus.CM007581.1                                17954432  0 -  59628241 C
e Loxodonta_africana.GL010049.1                            4216402  0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     5564  0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3042155  0 +   3914936 C
e Lepilemur_septentrionalis.k141_185316                      26379  0 +     54090 C
e Lepilemur_ruficaudatus.k141_121139                           988  0 +     25010 C
e Lepilemur_dorsalis.k141_577674                             28443  0 +     45836 C
e Lepilemur_ankaranensis.k141_596936                         10377  0 -     23766 C
e Lemur_catta.scaffold_24                                 15523493  0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    13159  0 -     42476 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Indri_indri.k141_3655594                                   21945  0 +     31101 C
e Ictidomys_tridecemlineatus.JH393364.1                    7519304 37 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  43778  0 +     55795 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_596025                  53  8 +       452 I
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               241618  0 +    327341 C
e Hapalemur_occidentalis.k141_907772                         12988  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                         13150  0 -     41752 C
e Hapalemur_griseus.k141_1511508                             13049  0 +     18253 C
e Hapalemur_gilberti.k141_488810                             11410  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           6261  0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Galeopterus_variegatus.GalVar_scaffold_108840                487  0 -      9135 C
e Galagoides_demidoff.k141_1711393                             670  0 +     41679 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  8642  0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20195128  0 + 205367284 C
e Eulemur_sanfordi.k141_1122526                              13181  0 +    111500 C
e Eulemur_rufus.k141_1476633                                  3606  0 -     17153 C
e Eulemur_rubriventer.k141_571033                            12988  0 +     26496 C
e Eulemur_mongoz.k141_232305                                 10068  0 +     97555 C
e Eulemur_macaco.k141_1562045                                12132  0 +     75513 C
e Eulemur_fulvus.k141_544389                                 13371  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                            12132  0 +     26330 C
e Eulemur_coronatus.k141_885031                              14932  0 -     25546 C
e Eulemur_collaris.k141_377015                                5904  0 -     16928 C
e Eulemur_albifrons.k141_342033                              13205  0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Equus_przewalskii.KK951119.1                               32494  0 +    498745 C
e Equus_caballus.CM000403.2                               18530479  0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1282658  0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2144750  0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16328616  0 -  41312741 C
e Ellobius_talpinus.LOJH01109367.1                             607  3 +      6299 I
e Ellobius_lutescens.LOEQ01008920.1                          90425  3 +    110024 I
e Elephantulus_edwardii.JH947257.1                         1090636  0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Eidolon_helvum.KE759718.1                                   9826  0 +     11740 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    5348  0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  672595  0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8629170  0 +  20541912 C
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Daubentonia_madagascariensis.ctg71                      12536717  0 -  12879189 C
e Dasypus_novemcinctus.JH564415.1                            62473  5 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    836510  0 +   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129             27783  0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_37019               1902  0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11666932  3 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 49454  3 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          13616  0 -     20389 C
e Condylura_cristata.JH655891.1                           17547413  8 -  53390261 I
e Colobus_guereza.LG01                                   199948958  0 + 200372422 C
e Choloepus_hoffmanni.KN194906.1                            172269  0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 17169  0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           15854  0 +     57038 C
e Cheirogaleus_major.k141_333249                             20487  0 -     52598 C
e Chaetophractus_vellerosus.ChaVel_scaffold_713168             206  0 -      2554 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1772  0 -     25243 C
e Cephalopachus_bancanus.k141_1423433                         4751  0 +     31688 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     92315  0 +    217609 C
e Castor_canadensis.CasCan_scaffold_2074                    136758  0 +    179628 C
e Carollia_perspicillata.CarPer_scaffold_92756                4154  0 -     11696 C
e Carlito_syrichta.NW_007247396.1                           200736  0 +    308752 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18499704  0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17958192  0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9033927  0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    184541  0 -    185531 C
e CanFam4.chr16                                           17798484  0 -  60362399 C
e Camelus_ferus.KB017975.1                                  402438  0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2334155  0 -   7040546 C
e Camelus_bactrianus.KN276810.1                           10001697  0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              53729  0 +     85213 C
e Avahi_laniger.k141_765380                                  53100  0 -     92717 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3791  0 +     43469 C
e Arctocebus_calabarensis.k141_2318572                       10712  0 +     14667 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      11194 23 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      184379  0 +    412891 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74034  3 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             78649  0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9509878  0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_11939                     24695  3 -     89785 I
e Acinonyx_jubatus.LLWD01001279.1                           826634  0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       5808 234 +     62944 ggtcctacataagttggacactaccttctc--aaacctgtctataaaa-ctt-ggcg-cactctgccattggcca--gtctttccctttcagaa-gccc-------t-------tgtctctctcaccggagagagagctattctcctttctcttttt------------------t-----------------------------ctgcctattaaacctc-t-act-cctaaactcctccatgagtgtctgtgccc-taaattttcttggcatgagacaatgaaccccaggtatttacac----cagaca
s Allenopithecus_nigroviridis.k141_3361533                   13726 233 -     52922 ggccttacgtaaatcggacaccatcttctc--aagtctgtctataaa--cct-ggtg-cactctgccactggccg--gtctttccctttcagaa-gccc-------t-------tctctctctcactggggagacagctgttctcctttctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccatgagtgtctgtgtcc-taaattttcttgctgtgagacaacgaaccccaagtatttacac----cagaca
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         13667 234 -     28001 ggccttacgtaaattggacaccatcttctc--aagtctgtctataaa-acct-ggtg-cactctgccactggccg--gtctttccctttcagaa-gccc-------t-------tccctctctcactggggagacagctgttctcctgtctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccatgagtgtctgtgtcc-taaattttgttggtatgagacaatgaaccccaagtatttacac----cagaca
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          4167 230 -     18505 ggccttacgtaaattggacaccatcctctc--aagtctgtctataaa-acct-ggtg-cactctgccactggccg--gtctttccctttcagaa-gccc-------t-------tccctctctcact----agacagctgttctcctgtctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccgtgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Allochrocebus_preussi.k141_1442296                     I 54 C 0
s Allochrocebus_solatus.k141_166128                           5016 234 -     12518 ggccttacgtaaattggacaccatcctctc--aagtctgtctataaa-acct-ggtg-cactctgccactggccg--gtctttccctttcagaa-gccc-------t-------tccctctctcactggggagacagctgttctcctgtctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                              2481 218 -     27731 ggcccttcgtaaaccagacaccgcc-ccctccagc-ccgtgtacaagc-ctg-ggg--cactctgccactggccc--gcctttccctttcagaa-gccc-------c-------tctctctcac---------------------------------------------------tgg-------ct-c-ct-tt-ctctttcttctgcctattaaacctc-c-act-cctaaactcccccatgggtgtctgtgtcc-ttaactttcttggcgtgaggcgtcgaaccacgggtatttacac----cagaca
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                2610 218 +      3134 ggcccttcgtaaaccagacaccgcc-ccctccagc-ccgtgtacaagc-ctg-ggg--cactctgccactggccc--gcctttccctttcagaa-gccc-------c-------tctctctcac---------------------------------------------------tgg-------ct-c-ct-tt-ctctttcttctgcctattaaacctc-c-act-cctaaactcccccatgggtgtctgtgtcc-tcaactttcttggcgtgaggcgtcgaaccacgggtatttacac----cagaca
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               2741 218 -     45847 ggcccttcgtaaaccagacaccgcc-ccctccagc-ccgtgtacaagc-ctg-ggg--cactctgccactggccc--gcctttccctttcagaa-gccc-------c-------tctctctcac---------------------------------------------------tgg-------ct-c-ct-tt-ctctttcttctgcctattaaacctc-c-act-cctaaactcccccatgggtgtctgtgtcc-tcaactttcttggcgtaaggcgtcgaaccacgggtatttacac----cagaca
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                23947 219 +     25266 ggcccttcgtaaagcagacaccgcc-ccctccagc-ccgtgtacaaag-cctgggg--cactctgccactggccg--gcctttccctttcagaa-gccc-------c-------tctctctcac---------------------------------------------------tgg-------ct-c-ct-tt-ctctttcttctgcctattaaacctc-c-act-cctaaactcctccatgggtgtctgtgtcc-ttaactttcttggcgtgaggcgtcgaactacgggtatttacac----cagaca
i Alouatta_juara.k141_1509701                            I 41 C 0
s Alouatta_nigerrima.k141_3472759                            17245 219 -     18578 ggcccttcgtaaagcagacaccgcc-ccctccagc-ccgtgtacaaag-cct-ggg-gcactctgccactggcct--gcctttccctttcagaa-gccc-------c-------tctctctcac---------------------------------------------------tgg--------t--tc-ctttctctttcttctgcctattaaacctc-c-act-cctaaactcctccatgggtgtctgtgtcc-tcaactttcttggcgtgaggcgtcgaactacgggtatttacac----cagaca
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              2634 219 +     47717 ggcccttcgtaaaccagacaccgcc-ccctcaagc-ccgtgtacaaag-tctgggg--cactctgccactggccc--gcctttccctttcagaa-gccc-------c-------tctctctcac---------------------------------tggctcctttctctttctt-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccatgggtatctgtgtcc-ttaactttcttggcgtgaggcgtcgaaccacgggtatttacac----cagaca
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             2746 217 -      3544 ggcccttcgtaaagcagacagcg-c-ccctccagc-ccgtgtacaaag-cct-ggg--cactctgccactggccg--gcctttccctttcagaa-gccc-------c-------tctctctcac---------------------------------------------------tgg-------ct-c-ct-tt-ctctttcttctgcctattaaacctc-c-act-cctaaactcctccatgggtgtctgtgtcc-ttaactttcttggcgtgaggcgtcgaactacgggtatttacac----cagaca
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             13967 219 +     50774 ggcccttcgtaaagcagacaccgcc-ccctccagc-ccgtgtacaaag-cctgggg--cactctgccactggccg--gcctttccctttcagaa-gccc-------c-------tctctctcac---------------------------------------------------tgg-------ct-c-ct-tt-ctctttcttctgcctattaaacctc-c-act-cctaaactcctccatgggtgtctgtgtcc-tcaactttcttggcgtgaggcgtcgaactacgggtatttacac----cagaca
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  14619 198 -     33861 ggcccttcgtaagccagataccacc-cctg--aaa-ctgtgtacaaag-cct-ggg--cactctgccactggccg--gcctttccctttcagaa-gccc-------c-------tctttctcac---------------------------------------------------t-----------------------------ctgcctattaaacct--ctact-cctaaactcctccgtgtgtgtccgtgtcc-ttaactttcttggcgtgagacactgaactgtggatatttacac----cagaca
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            14639 198 -     34016 ggccctttgtaagccagataccaca-cctg--aaa-ctgtgtacaaag-cct-ggg--cactctgccactggccg--gcctttccctttcagaa-gccc-------c-------tctttctcac---------------------------------------------------t-----------------------------ctgcctattaaacct--ctact-cctaaactcctccgtgtgtgtctgtgtcc-ttaactttcttggcgtgagacactgaactatgggtatttacac----cggaca
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297036 198 -   5030052 ggccctttgtaagccagatacgacc-ccTG--AAA-CTGTGTACAAAG-CCT-GGG--CACTCTGCCACTGGCCG--GCCTTTCCCTTTCAGAA-GCCC-------C-------TCTTTCTCAc---------------------------------------------------t-----------------------------ctgcctattaaacct--ctaCT-CCTAaactcctccgtgtgtgtccgtgtcc-ttaactttcttggcgtgagacactgaactatgggtatttacac----cggaca
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             14641 198 -     34685 gtcccttcgtaagccagataccacc-cctg--aaa-ctgtgtacaaag-cct-ggg--cactctgccactggccg--gcctttccctttcagaa-gccc-------c-------tctttctcac---------------------------------------------------t-----------------------------ctgcctattaaacct--ctact-cctaaactcctccgtgtgtgtccgtgtcc-ttaactttcttggcgtgagacactgaactatgggtatttacac----cagaca
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               27765 198 -     47192 gtcccttcgtaagccagataccacc-cctg--aaa-ctgtgtacaaag-cct-ggg--cactctgccactggccg--gcctttccctttcagaa-gccc-------c-------tctttctcac---------------------------------------------------t-----------------------------ttgcctattaaacct--ctact-cctaaactcctccgtgtgtgtccgtgtcc-ttaactttcttggcgtgagacactgaactatgggtatttacac----cagaca
i Aotus_vociferans.k141_344750                           C 0 C 0
s Callibella_humilis.k141_1278103                             4364 205 -     10423 ggccctttgtaaaccagacaccgcc-cctc--aaa-ctgtgtacaaag-cct-gggg-cactctgccactggccg--gcctttcccttccagaa-gccc-------ctctcttctctttctcac---------------------------------------------------t-----------------------------ctgcttagtaaacct--c-act-cctaaactcctccgtgtgcatctgtgtcc-ttaactttcctggcgtgagacatcgaactacggggatttacac----cagatg
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             23840 204 +     31915 ggcc-tttgtaaaccagacaccgcc-cctc--aaa-ctgtgtacaaag-ccg-gggg-cactctgccagtggccg--gccttgccctttcagaa-gccc-------ctctcttctctttctcac---------------------------------------------------t-----------------------------ctgcctagtaaacct--c-act-cctgaactcctccttgtgcgtctgtgtcc-ttaactttcctggcgtgagacattgaactacagggatttacac----cagacg
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            4330 205 +      5267 ggccctttgtaaaccagacaccgcc-cctg--aaa-ctgtgtacaaag-cct-gggg-cactctgccactggccg--gcctttcccttccagaa-gccc-------ctctcttctctttctcac---------------------------------------------------t-----------------------------ctgcttagtaaatct--c-act-cctaaactcctccgtgtgcatctgtttcc-ttaactttcctggtgtgagacatcgaactatggggatttacac----cagacg
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23589544 205 - 189096842 GGCCCTTTGTAAACCAGACACCGCC-CCTG--AAA-CTGTGTACAAAG-CCT-GGGG-CACTCTGCCACTGGCCG--GCCTTTCCCTTCCAGAA-GCCC-------CTCTCTTCTCTTTCTCAC---------------------------------------------------T-----------------------------CTGCTTAGTAAATCT--C-ACT-CCTAAACTCCTCCATGTGcatctgtgtcc-ttaactttcctggtgtgagacatcgaactacggggATTTACAC----CAGACG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             11074 205 -     12001 ggccctttgtaaaccagacaccgcc-cctg--aaa-ctgtgtacaaag-cct-gggg-cactctgacactggccg--gcctttcccttccagaa-gccc-------ctctcttctctttctcac---------------------------------------------------t-----------------------------ctgcttagtaaatct--c-act-cctaaactcctccatgtgcatctgtgtcc-ttaactttcctggcgtgagacatcgaactatggggatttacac----cagacg
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Cebuella_niveiventris.k141_1251222                          8989 205 -     11392 ggccctttgtaaaccagacaccgcc-cctc--aga-ctgtgtacaaag-cct-gggg-cactctgccactggccg--gcctttcccttccagaa-gccc-------ctctcttctctttctcac---------------------------------------------------t-----------------------------ctgcttagtaaacct--c-act-cctaaactccttcgtgtgcatctgtgtcc-ttaactttcctggcgtgagacatcgaactacggggatttacac----cagacg
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               5087 205 -      7577 ggccctttgtaaaccagacaccgcc-cctc--aaa-ctgtgtacaaag-cct-gggg-cactctgccactggccg--gcctttcccttccagaa-gccc-------ctctcttctctttctcac---------------------------------------------------t-----------------------------ctgcttagtaaacct--c-act-cctaaactcctccgtgtgcatctatgtcc-ttaactttcctggcgtgagacatcgaactacggggatttacac----cagacg
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25651119 145 +  26074798 gg-ccttcgtaagccagacaccacc-cctc--gaa-ctgtgcacaaag-cct--ggggccctctgccaccggccg--gcctttgcctttcagaa-gccc-------c-------cctttctgac---------------------------------------------------tgggagagagctgctctctttctctttctcctgcctatgaaacccc------------------------------------------------------------------------------------------
i Cebus_albifrons.Contig27                               C 0 I 81
s Cebus_olivaceus.k141_1000828                                2509 156 -      2944 ---------------------------------------------------------------------------------ctgcCTTtcagaa-gccc-------c-------cctttctgac---------------------------------------------------tgggagagagctgctctctttctctttctcctgcctatgaaacctc-c-act-cctaaactcctccgtgtgcatctgcgtcc-ttaacctccttggcgtgagacgtcgaactacgggtatttacac----cagaca
i Cebus_olivaceus.k141_1000828                           I 6 I 62
s Cebus_unicolor.k141_544048                                 49027 227 -     74725 gg-ccttcgtaagccagacaccacc-cctc--gaa-ctgtgcacaaag-cct--ggggccctctgccaccggccg--gcctttgcctttcagaa-gccc-------c-------cctttctgac---------------------------------------------------tgggagagagttgctctctttctctttctcctgcctatgaaacctc-c-act-cctaaactcctctgtgtgcgtctgcgtcc-ttaacctccttggcatgagatgtcgaactatgggtatttacac----cagaca
i Cebus_unicolor.k141_544048                             C 0 C 0
s Cercocebus_atys.KQ010504.1                               4474679 233 +   4669795 ggccttacgtaaattggacaccatcctctc--aagtctgtctataaa--CCT-GGTG-CACTCTGCCACTGGCCG--GTCTTTCCCCTTCAGAa-gccc-------t-------tctctctctcactgggGAGACAgctattctcctttctcttttt------------------t-----------------------------ctgcctATTAAACGTC-C-ACT-CCTAAACTCCTCCATGAgtgtctgtgtcc-taaatttTcttggtgtgagacaatgaaccccaagtatttacac----cagata
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        13228 229 -     19203 ggccttacgtaaattggacaccatcctctc--aagtctgtctataaa--cct-ggtg-cactctgtcactggccg--gtctttccctttgagaa-gccc-------t-------tctctctctcactggggagacagctattctcctttctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaatgaaccccaagtatttacac--------ca
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           7650 233 +      8260 ggccttacgtaaattggacaccatcctctc--aagtctgtctataaa--cct-ggtg-cactctgccactggccg--gtctttccccttcagaa-gccc-------t-------tctctctctcactggggagacagctattctcctttctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           7876 233 +     27781 ggccttacgtaaattggacaccatcctctc--aagtctgtctataaa--cct-ggtg-cactctgccactggccg--gtcttcccctttcagaa-gccc-------t-------tctctctctcactggggagacagctattctcctttctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaatgaaccccaagtatttacac----cagata
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         8036 233 -     20310 ggccttacgtaaattggacaccatcttctc--aagtctgtctataaa--cct-ggtg-cactctgccactggccg--gtctttccctttcagaa-gccc-------t-------tctctctctcactggggagacagctattctcctttctctcttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccatgagtgtctgtgtcc-tagattttcttggtgtgagacaacgaactccaagtatttacac----cagaca
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          11015 233 +     29689 ggccttacgtaaattggacaccatcttctc--aagtctgtctataaa--cct-ggtg-cactctgccactggccg--gtctttccctttcagaa-gccc-------t-------tctctctctcactggggagacagctattctcctttctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccatgagtgtctgtgtcc-tagattttcttggtgtgagacaacgaactccaagtatttacac----cagaca
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            5444 233 +      9989 ggccttacgtaaattggacaccatcttctc--aagtctgtctataaa--cct-ggtg-cactctgccactggccg--gtctttccctttcagaa-gccc-------t-------tccctctctcactggggagacagctattctcctgtctcttttc------------------t-----------------------------ctgcccattaaacctc-c-act-cctaaactcctccatgagtgtctgtgtcg-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          13694 233 -     27936 ggccttacgtacattggataccatcctctc--aagtctgtctataaa--cct-ggtg-cactctgccactggccg--gtctttccctttcagaa-gccc-------t-------tccctctctcactggggagacagctattctcctttttctcttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccatgagtgtctgtgtcc-taaattctcttgctgtgagacaacgaaccccaagtatttacac----cagaca
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            2560 233 -     17152 ggccttacgtaaattggacaccatcttctc--aagtctgtctataaa--cct-ggtg-cactctgccactggccg--gtctttccctttcagaa-gccc-------t-------tctctctctcactggggagacagctattctcctttctctcttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38816098 229 +  39242232 ggccttacgtaaattggacaccatcttctc--aagtctgtctataaa--cct-ggtg-cactctgccactggccg--gtctttccctttcagaa-gccc-------t-------tctctctctcactggggagacagctattctcctttctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccatgagtgtctgtgtcc-tagattttcttggtgtgagacaacgaaccccaagtatttacac----ca----
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21221789 233 -  21565898 ggccttacggaaattggacaccatcttctc--aagtctgtctataaa--cct-ggtg-cactctgccactggccg--gtctttccctttcagaa-gccc-------t-------tctctctctcactggggagacagctattctcctttctctcttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       38907 233 -     53127 ggccttacgtaaattggacaccatcttctc--aagtctgtctataaa--cct-ggtg-cactctgccactggccg--gtctttccctttcagaa-gccc-------t-------tctctctctcactggggagacagctattctcctttctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        6179 229 +      7159 ggccttacgtaaattggacaccatcttctc--aagtctgtctataaa--cct-ggtg-cactctgccactggccg--gtctttccctttcagaa-gccc-------t-------tctctctctcactggggagacagctattctcctttctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccatgagtgtctgtgtcc-tagattttcttggtgtgagacaatgaaccccaagtatttacac----ca----
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       13710 233 -     27947 ggccttacgtaaattggacaccatcttctc--aagtctgtttataaa--cct-ggtg-cactctgccactggccg--gtctttccctttcagaa-gccc-------t-------tctctctctcactggggagacagctattctcctttctctcttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatgtacac----cagaca
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         13683 233 +     17596 ggccttacgtaaattggacaccatcttctc--aagtctgtctataaa--cct-ggtg-cactctgccactggccg--gtctttccctttcagaa-gccc-------t-------tctctctctcactggggagacagctattctcctttctctcttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          2917 233 +     26000 ggccttacgtaaattggacaccatcttctc--aagtctgtctataaa--cct-ggtg-cactctgccactggccg--gtctttccctttcagaa-gccc-------t-------tccctctctcactggggagacagctattctcctgtctcttttc------------------t-----------------------------ctgcccattaaacctc-c-act-cctaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Chiropotes_albinasus.k141_2813271                          10253 124 +     11226 ggccctttgtaaaccagacaccgcc-cctc--aaa-ctgtgtgcaaag-cct-gg-ggcactctgccactggcca--gccttcccctttcagaa-tgccgtcttttc-------tctttctcac---------------------------------------------------t-----------------------------ctgcctagtaaacctc------------------------------------------------------------------------------------------
i Chiropotes_albinasus.k141_2813271                      C 0 I 69
s Chlorocebus_aethiops.ctg25                              18427667 234 -  18827391 ggccttacgtaaattggacaccatcttctc--aagtctgtctataaa-acct-ggtg-cactctgccactggccg--gtctttccctttcagaa-gccc-------t-------tctctctctcactggggagacagctgttctcctgtctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       14104 234 -     50209 ggccttacgtaaattggacaccatcttctc--aagtctgtctataaa-acct-ggtg-cactctgccactggccg--gtctttccctttcagaa-gccc-------t-------tctctctctcactggggagacagctgttctcctgtctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135421104 234 + 135778131 ggccttacgtaaattggacaccatcttctc--aagtctgtctataaa-acct-ggtg-cactctgccactggccg--gtctttcccttTCAGAa-gccc-------t-------tctctctctcactgggGAGACAGCTGTTCTCCTGTCTCTTTtt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactcCTCCATGAgtgtctgtgtcc-taaatttTcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1909620 234 +   2368649 ggccttacgtaaattggacaccatcttctc--aaatctgttgataaaa-cct-ggtg-cactctgccactgaccg--gTCTTTTGCTTTCAGAA-GCCC-------T-------TCTCTCTCTCACAGGGGAGACAgctattctcctttctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-ccgAAACTCCTCCATGAgtgtctgtgtcc-taaatttTcttggtgtgagacaacgaaccccaagtatttacac----tagaca
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_polykomos.k141_906115                              36158 234 +     84244 ggccttacgtaaattggacaccatcttctc--aaatctgttgataaaa-cct-ggtg-cactctgccactgaccg--gtcttttgctttcagaa-gccc-------t-------tctctctctcacaggggagacagctattctcctttctcttttt------------------t-----------------------------ctgcctattaaacgtc-c-act-ccgaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Colobus_polykomos.k141_906115                          C 0 C 0
s Erythrocebus_patas.Contig38                             21204275 233 -  21539334 ggccttacgtaaattggacaccatcttctc--aagtctgtctataaa-acct-ggtg-cactctgccactggcca--gtctttccctttcagaa-gccc-------t-------tctctctctcactggggagacagctgttctcctgtctct-ttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Erythrocebus_patas.Contig38                            C 0 C 0
s Gorilla_beringei.k141_3596273                              15063 234 -     32273 ggtcctacataagtcggacaccaccttctc--aaacctgtctataaaa-ctt-ggca-cactctgccattgccca--gtctttccctttcagaa-gccc-------t-------tgtctctctcaccggagagagagctattctcctttctcttttt------------------t-----------------------------ctgcctattaaacctc-t-act-cctaaactcctccatgagtgtctgtgtcc-taaattttcttggcatgagacaatgaaccccaggtatttacac----cagaca
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186337209 234 + 186649187 ggtcctacataagtcggacaccaccttctc--aaacctgtctataaaa-ctt-ggcg-cactctgccattgccca--gtctttccctttcagaa-gccc-------t-------tgtctctctcaccagagagagagctattctcctttctcttttt------------------t-----------------------------ctgcctattaaacctc-t-act-cctaaactcctccatgagtgtctgtgtcc-taaattttcttggcatgagacaatgaaccccaggtatttacac----cagaca
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hoolock_leuconedys.ctg274                                    433877 233 +    630532 gggccta-gtaaatcggataccacctcctc--aagcctgtctataaaa-cct-ggcg-cactctgccattggcca--gtctttccctttcagaa-gccc-------t-------tctctctctcaccggaaagagagctattctcctttctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccgtgagtgtctgtgtcc-taaattttcttggcatgagacaatgaaccccaggtatttacac----cagaca
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_232023                                1643 233 -     12752 gggccta-gtaaatcggataccacctcctc--aagcctgtctataaaa-cct-ggtg-cactctgccaccggcca--gtctttccctttcagaa-gccc-------t-------tctctctctcaccggagggagagctattctcctttctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccatgagtgtctgtgtcc-taaattttcttggcatgagacaacgaaccccaggtatttacac----cagaca
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                               1687 233 +     14092 gggccta-gtaaatcggataccacctcctc--aagcctgtctataaaa-cct-ggtg-cactctgccactggcca--gtctttccctttcagaa-gccc-------t-------tctctctctcaccggagggagagctattctcctttctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccatgagtgtctgtgtcc-taaattttcttggcatgagacaacgaaccccaggtatttacac----cagaca
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189542470 233 - 191637585 gggccta-gtaaatcggataccacctcctc--aagcctgtctataaaa-cct-ggtg-cactctgccactggcca--gtctttccctttcagaa-gccc-------t-------tctctctctcaccggagggagagctattctcctttctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccatgagtgtctgtgtcc-taaattttcttggcatgagacaacgaaccccaggtatttacac----cagaca
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3335364 234 -  11177569 gggccta-gtaaatcggataccacctcctc--aagcctgtctataaaa-cct-ggtg-cactctgccactggcca--gtctttccctttcagaaggccc-------t-------tctctctctcaccggagggagagctattctcctttctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccatgagtgtctgtgtcc-taaattttcttggcatgagacaacgaaccccaggtatttacac----cagaca
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        6621 205 +     64341 ggccctttgtaaaccagacaccgcc-cctc--aaa-ctgtgtgcaaag-cct-gggg-cgctctgccactggcca--gcctttccctttcagaa-gccc-------ctcttttctctttctcac---------------------------------------------------t-----------------------------ctgcctagtaaacct--c-gatgcctgaacgcctcggtgtgtgtctgtgtcc-tgaactttcttggcgtgagacgtcgaactacggggatttacac----cagac-
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           3948 205 +      4941 ggccctttgtaaaccagacaccgcc-cctc--aaa-ctgtgtgcaaag-ccc-gggg-cactctgccactggcca--gcctttccctttcagaa-gccc-------ctcttttctctttctcac---------------------------------------------------t-----------------------------ctgcctagtaaacct--c-gatgcctgaacgcctcggtgtgtgtctgtgtcc-tgaactttcttggcgtgagacgtcgaactacggggatttacac----cagac-
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        6664 205 +     35603 ggccctttgtaaaccagacaccgcc-cctc--aaa-ctgtgtgcaaag-cct-gggg-cgctctgccactggcca--gcttttccctttcagaa-gccc-------gtcttttctctttctcac---------------------------------------------------t-----------------------------ctgcctagtaaacct--c-gatgcctgaacgcctcggtgtgtgtctgtgtcc-tgaactttcttggcgtgagacgtcgaactacggggatttacac----cagac-
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    28137 207 +     38576 ggccctttgtaaagcagacactgcc-cctc--aaa-ctgtgtacaaag-cct-gggg-tcctctgccactggccg--gcctttccctttcagaa-ccct-------ctcttttctctttctcac---------------------------------------------------t-----------------------------ctgcctagtaaacct-cc-act-cctaaactcctccgtgtgtgtctgtgtcctttaactttctcggcgtgagacgttgaactacagggatttacac----cagaca
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         24834 207 +     66356 ggccctttgtaaagcagacactgcc-cctc--aaa-ctgtgtacaaag-cct-gggg-tcctctgccactggcca--gcctttccctttcagaa-ccct-------ctcttttctctttctcac---------------------------------------------------t-----------------------------ctgcctagtaaacct-cc-act-cctaaactcctccgtgtgtgtctgtgtcctttaactttctcggcgtgagacgttgaactacagggatttacac----cagaca
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lophocebus_aterrimus.ctg367                              1436226 233 +   1826925 ggccttacgtaaattggacaccatcctctc--aagtctgtctataaa--cct-ggtg-cactctgccactggccg--gtctttccctttcagaa-gccc-------t-------tctctctctcactggggagacagctattctcctttctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                               6034 229 +     40492 ggccttacgtaaattggacaccatcctctc--aagtctgtctataaa--cct-ggtg-cactctgccactggccg--gtctttccctttcagaa-gccc-------t-------tctctctctcactggggagacagctattctcctttctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacaaaccccaagtatttacac----ca----
i Macaca_arctoides.k141_2326796                          C 0 I 4
s Macaca_assamensis.Contig5                               59675296 232 +  60120075 ggccttacgtaaattggacaccatcctctc--aagtctgtctataaa--cct-ggtg-cactctgccactggccg--gtctttccctttcagaa-gccc-------t-------tctctctctcactggggagacagctattctcctttctc-tttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacaaaccccaagtatttacacNNNNca----
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 11814 226 -     26193 ggccttacgtaaattggacaccatcctctc--aagtctgtctataaa--cct-ggtg-cactctgccactggccg--gtctttccctttcagaa-gccc-------t-------tctctctctcactggggagacagctattctcctttctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-c---aactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacaaaccccaagtatttacac----ca----
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            79597 226 -    114318 ggccttacgtaaattggacaccatcctctc--aagtctgtctataaa--cct-ggtg-cactctgccactggccg--gtctttccctttcagaa-gccc-------t-------tctctctctcactggggagacagctattctcctttctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-c---aactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacaaaccccaagtatttacac----ca----
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  5288 226 -     23192 ggccttacgtaaattggacaccatcctctc--aagtctgtctataaa--cct-ggtg-cactctgccactggccg--gtctttccctttcagaa-gccc-------t-------tctctctctcactggggagacagctattctcctttctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-c---aactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacaaaccccaagtatttacac----ca----
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                14756 229 -     29190 ggccttacgtaaattggacaccatcctctc--aagtctgtctataaa--cct-ggtg-cactctgccactggccg--gtctttccctttcagaa-gccc-------t-------tctctctctcactggggagacagctattctcctttctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacaaaccccaagtatttacac----ca----
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  23321 229 +     37952 ggccttacgtaaattggacaccatcctctc--aagtctgtctataaa--cct-ggtg-cactctgccactggccg--gtctttccctttcagaa-gccc-------t-------tctctctctcactggggagacagctattctcctttctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacaaaccccaagtatttacac----ca----
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186838412 226 + 187317192 ggccttacgtaaattggacaccatcctctc--aagtctgtctataaa--cct-ggTG-CACTCTGCCACTAGCCG--GTCTTTCCCTTTCAGAA-gccc-------t-------tctctctctcactggGGAGACAgctattctcctttctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-c---aACTCTtccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacaaaccccaagtatttacac----ca----
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25456973 229 -  25927173 ggccttacgtaaattggacaccatcctctc--aagtctgtctataaa--CCT-GGTG-CACTCTGCCACTGGCCG--GTCTTTCCCTTTCAGAa-gccc-------t-------tctctctctcactggGGAGACAgctattctcctttctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacaaaccccaagtatttacac----ca----
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  79172 229 +     89720 ggccttacataaattggacaccatcctctc--aagtctgtctataaa--cct-ggtg-cactctgccactggccg--gtctttccctttcagaa-gccc-------t-------tctctctctcactggggagacagctattctcctttctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacaaaccccaagtatttacac----ca----
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 6170 229 +     20474 ggccttacgtaaattggacaccatcctctc--aagtctgtctataaa--cct-ggtg-cactctgccactggccg--gtctttccctttcagaa-gccc-------t-------tctctctctcactggggagacagctattctcctttctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacaaaccccaagtatttacac----ca----
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   5970 229 -     14993 ggccttacgtaaattggacaccatcctctc--aagtctgtctataaa--cct-ggtg-cactctgccactggccg--gtctttccctttcagaa-gccc-------t-------tctctctctcactggggagacagctattctcctttctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacaaaccccaagtatttacac----ca----
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  328836 229 -    668171 ggccttacgtaaattggacaccatcctctc--aagtctgtctataaa--cct-ggtg-cactctgccactggccg--gtctttccctttcagaa-gccc-------t-------tctctctctcactggggagacagctattctcctttctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacaaaccccaagtatttacac----ca----
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 4281 233 -     24072 ggccttacgtaaatcggacaccatcctctc--aagtctgtctataaa--cct-ggtg-cactctgccactggccg--gtctttccctttcagaa-gccc-------t-------tctctctctcactggggagacagctattctcctgtctcttttt------------------g-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccatgagcgtctgtgtcc-taaattttcttggtgtgagacaacaaaccccaagtatttacacNNNNca----
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               24909 229 -     45290 ggccttacgtaaattggacaccatcctctc--aagtctgtctataaa--cct-ggtg-cactctgccactggccg--gtctttccctttcagaa-gccc-------t-------tctctctctcactggggagacagctattctcctttctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacaaaccccaagtatttacac----ca----
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23936501 233 -  24302211 ggccttacgtaaattggacaccatcctctc--aagtctgtctataaa--cct-ggtg-cactctgccactggccg--gtctttccctttcagaa-gccc-------t-------tctctctctcactgggcagacagctattctcctttctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtttttacac----cagaca
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               350629 233 +    752769 ggccttacgtaaattggacaccatcctctc--aagtctgtctataaa--cct-ggtg-cactctgccactggccg--gtctttccctttcagaa-gccc-------t-------tctctctctcactgggcagacagctattctcctttctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtttttacac----cagaca
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Mico_argentatus.k141_1239457                                4904 205 -      7380 ggccctttgtaaaccagacaccgcc-cctc--aaa-ctgtgtacaaag-cct-gggg-cactctgccactggccg--gcctttcccttccagaa-gccc-------ctctcttctctttctcac---------------------------------------------------t-----------------------------ctgcttagtaaacct--c-act-cctaaactcctccgtgtgcatctgtgtcc-ttaactttcctggcgtgagacatcgaactacggggatttacac----cagatg
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               3977 205 +     18990 ggccctttgtaaaccagacaccgcc-cctc--aaa-ctgtgtacaaag-cct-gggg-cactctgccactggccg--gcctttcccttccagaa-gccc-------ctctcttctctttctcac---------------------------------------------------t-----------------------------ctgcttagtaaacct--c-act-cctaaactcctccgtgtgcatctgtgtcc-ttaactttcctggcgtgagacatcgaactacggggatttacac----cagatg
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      4916 205 -      7356 ggccctttgtaaaccagacaccgcc-cctc--aaa-ctgtgtacaaag-cct-gggg-cactctgccactggccg--gcctttcccttccagaa-gccc-------ctctcttctctttctcac---------------------------------------------------t-----------------------------ctgcttagtaaacct--c-act-cctaaactcctccgtgtgcatctgtgtcc-ttaactttcctggcgtgagacatcgaactacggggatttacac----cagatg
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Miopithecus_ogouensis.k141_534055                           8223 233 -     28506 ggccttacgtaaattggacaccatcctctc--aagtctgtctataaa--cct-ggtg-cactctgccactggccg--gtctttccctttcagaa-gccc-------t-------tctctctctcactggggagacagctgttctcctgtctcttttt------------------t-----------------------------ctgtctattaaacctc-c-act-cctaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Nasalis_larvatus.k141_413338                               14308 141 +     21681 -------------------------------------------------------------------------------------------------------------------ttctctctcacaggggagacagctattctcctgtctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-ccgaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Nasalis_larvatus.k141_413338                           I 91 C 0
s Pan_paniscus.KQ411613.1                                    43156 234 +     80009 ggtcctacataagtcggacaccaccttctc--aaacctgtctataaaa-ctt-ggtg-cactcTGCCATTGGCCA--GTCTTTCCCTTTCAGAA-GCCC-------T-------TGTCTCTCTCACCGGAGAGAGagctattctcctttctcttttt------------------t-----------------------------ctgcctattaaacctc-t-acT-CCTAAACTCCTCCATGAgtgtctgtgtcc-taaatttTcttggcatgagacaatgaaccccaggtatttacac----cagaca
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03001836.1                             29081 234 +     51860 ggtcctacataaGTCGGACACCACCTTCTC--AAACCTGTCTATAAAA-CTT-GGCG-CACTCTGCCATTGGCCA--GTCTTTCCCTTTCAGAA-GCCC-------T-------TGTCTCTCTCACCGGAGAGAGagctattctcctttctcttttt------------------t-----------------------------ctgcctattaaacctc-t-acT-CCTAAACTCCTCCATGAgtgtctgtgtcc-taaatttTCTTGGCATGAGACAATGAACCCCAGGTATTTACAC----CAGACA
i Pan_troglodytes.NBAG03001836.1                         I 448 I 64
s Papio_anubis.CM001495.2                                183442249 233 + 183742232 ggccttacataaattggacaccatcctctc--aagtctgtctgtaaa--cct-ggtG-CACTCTGCCACTGGCCG--GTCTTTCCCTTTCAGAA-gccc-------t-------tctctctctcactgGGGAGACAgctattctcctttctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactccTCcatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             5947 233 +     20448 ggccttacgtaaattggacaccatcctctc--aagtctgtctataaa--cct-ggtg-cactctgccactggccg--gtctttccctttcagaa-gccc-------t-------tctctctctcactggggagacagctattctcctttctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20562755 233 +  20919399 ggccttacgtaaattggacaccatcctctc--aagtctgtctataaa--cct-ggtg-cactctgccactggccg--gtctttccctttcagaa-gccc-------t-------tctctctctcaccggggagacagctattctcctttctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   4691 233 +     41871 ggccttacgtaaattggacaccatcctctc--aagtctgtctgtaaa--cct-ggtg-cactctgccactggccg--gtctttccctttcagaa-gccc-------t-------tctctctctcactggggagacagctattctcctttctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     7976 233 +     27711 ggccttacataaattggacaccatcctctc--aagtctgtctgtaaa--cct-ggtg-cactctgccactggccg--gtctttccctttcagaa-gccc-------t-------tctctctctcactggggagacagctattctcctttctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  8054 233 +      9205 ggccttacgtaaattggacaccatcctctc--aagtctgtctgtaaa--cct-ggtg-cactctgccactggccg--gtctttccctttcagaa-gccc-------t-------tctctctctcactggggagacagctattctcctttctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Papio_ursinus.k141_3428135                             C 0 C 0
s Piliocolobus_badius.k141_1234363                           42718 234 +     62158 ggcctcacgtaaattggacaccatcttctc--aagtctgttgataaaa-cct-ggcg-caccctgccactggccg--gtcttttgctttcagaa-gccc-------t-------tctctctctcactggggagacagctattctcctttctcgtttt------------------t-----------------------------ctgcctattaaacctc-c-act-ccgaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        37449 234 +     89929 ggcctcacgtaaattggacaccatcttctc--aagtctgttgataaaa-cct-ggcg-cactctgccactggccg--gtctttcgctttcagaa-gccc-------t-------tctctctctcactagggagacagctattctcctttctcgtttt------------------t-----------------------------ctgcctattaaacctc-c-act-ctgaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttatac----cagaca
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            38865 234 +     51399 ggcctcacgtaaattggacaccatcttctc--aagtctgttgataaaa-cct-ggcg-cactctgccactggccg--gtctttcgctttcagaa-gccc-------t-------tctctctctcactggggagacagctattctcctttctcgtttt------------------t-----------------------------ctgcctattaaacctc-c-act-ctgaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttatac----cagaca
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14295103 234 -  14605196 ggcctcacgtaaattggacaccatcttctc--aagtctgttgataaaa-cct-ggcg-cactctgccactggccG--GTCTTTCACTTTCAGAA-gccc-------t-------tctctctctcactggGGAGACAGCTATTCTCCTTTCTCGTTtt------------------t-----------------------------ctgcctattaaacctc-c-act-ctGAAACTCCTCCATGAgtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189130201 229 + 189387572 ggtcctacataaatcggacaccacagcctG-------TGTCTATAAAA-CCT-GGCG-CACTCTGCCATTGGCCA--GTCTTTCCCTTTCAGAA-GCCC-------T-------TCTCTCTCTCACCGGAGACAGAgctattctcctttctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactccGCCATGAgtgtctgtgtcc-taaattttcttggcatgagacaatgaaccccaggtatttacac----cagaca
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9569809 229 +   9816681 ggtcctacataaatcggacaccacagcctg-------tgtctataaaa-cct-ggcg-cactctgccattggcca--gtctttccctttcagaa-gccc-------t-------tctctctctcaccggagacagagctattctcctttctcttttt------------------t-----------------------------ctgcctattaaacctc-t-act-cctaaactccgccatgagtgtctgtgtcc-taaattttcttggcatgagacaatgaaccccaggtatttacac----cagaca
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               72390 232 -     81375 ggccttacgtaaattggacaccatcttctc--aagtctgtctataaaa-cct-ggtg-cactctgccactggtcg--gtctttcgctttcagaa-gccc-------t-------tct--ctctcacaggggagacagctattctcctgtctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-ccgaagctcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              4210 232 +     19060 ggccttacgtaaattggacaccatcttctc--aagtctgtctataaaa-cct-ggtg-cactctgccactggtcg--gtctttcgctttcagaa-gccc-------t-------tct--ctctcacaggggagacagctattctcctgtctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-ccgaagctcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Pygathrix_cinerea.k141_1153803                             14308 141 -     91421 -------------------------------------------------------------------------------------------------------------------ttctctctcacaggggagacagctattctcctgtctcttttt------------------t-----------------------------ctgcctatgaaacctc-c-act-ccgaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaatgaaccccaagtatttacac----cagaca
i Pygathrix_cinerea.k141_1153803                         I 91 C 0
s Pygathrix_nigripes_b.ctg100                                 7608431 141 +   7812017 -------------------------------------------------------------------------------------------------------------------ttctctctcacaggggagacagctattctcctgtctcttttt------------------t-----------------------------ctgcctatgaaacctc-c-act-ccgaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Pygathrix_nigripes_b.ctg100                               I 91 C 0
s Pygathrix_nigripes_a.k141_215492                             14279 141 -     72585 -------------------------------------------------------------------------------------------------------------------ttctctctcacaggggagacagctattctcctgtctcttttt------------------t-----------------------------ctgcctatgaaacctt-c-act-ccgaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Pygathrix_nigripes_a.k141_215492                         I 91 C 0
s Rhinopithecus_bieti.k119_217274                             5996 141 -     11128 -------------------------------------------------------------------------------------------------------------------ttctctctcacaggggagacagctattctcctgtctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-ccgaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagacg
i Rhinopithecus_bieti.k119_217274                        I 91 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91235352 141 - 195417433 -------------------------------------------------------------------------------------------------------------------ttctctctcacaggGGAGacagctattctcctgtctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-ccgAAACTCctccatgagtgtctgggtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Rhinopithecus_roxellana.NC_044550.1                    I 91 C 0
s Rhinopithecus_strykeri.ctg102                            7671001 141 +   7961872 -------------------------------------------------------------------------------------------------------------------ttctctctcacaggggagacagctattctcctgtctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-ccgaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagacg
i Rhinopithecus_strykeri.ctg102                          I 91 C 0
s Saimiri_boliviensis.NW_024100920.1                     119950210  26 - 121099817 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAACTATGGGTATTTACAC----CAGACA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       22666  26 +     46362 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------cgaactatgggtatttacac----cagaca
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               22761  26 +     45824 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------cgaactatgggtatttacac----cagaca
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             39389  26 -     64574 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------cgaactATGGGTATTTACAG----CAGACA
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               2395  26 -     23631 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------cgaactatgggtatttacac----cagaca
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 22657  26 -     61129 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------cgaactatgggtatttacac----cagaca
i Saimiri_ustus.k141_1484609                             I 3 C 0
s Saguinus_bicolor.k141_2619299                               7316 124 -      8359 ggccctttgtaaaccagacaccgcc-cctc--aaa-ctgtgtgcaaag-cct-gggg-cactctgccactggcca--gccttcccctttcagaa-tgcc-------gtcttttctctttctcac---------------------------------------------------t-----------------------------ctgcctagtaaacct--c----------------------------------------------------------------------------------------
i Saguinus_bicolor.k141_2619299                          C 0 I 68
s Saguinus_imperator.k141_2524406                             1270 123 +      2197 ggccctttgtaaaccagacacggcc-cctc--aaa-ctgtgtgcaaag-cct-gggg-cactctgc-actggcca--gccttcccctttcagaa-gccc-------gtcttttctctttctcag---------------------------------------------------t-----------------------------ctgcctagtaaacct--c----------------------------------------------------------------------------------------
i Saguinus_imperator.k141_2524406                        C 0 I 68
s Saguinus_inustus.k141_699149                               12692 124 +     13640 ggccctttgtaaaccagacacggcc-cctc--aaa-ctgtgtgcaaag-cct-gggg-cactctgccactggcca--gccttcccctttcagaa-gccc-------gtcttttctctttctcag---------------------------------------------------t-----------------------------ctgcctagtaaacct--c----------------------------------------------------------------------------------------
i Saguinus_inustus.k141_699149                           C 0 I 68
s Saguinus_labiatus.k141_285685                               7556 124 +      8564 ggccctttgtaaaccagacacggcc-cctc--aaa-ctgtgtgcaaag-cct-gggg-cactctgccactggcca--gccttcccctttcagaa-gccc-------gtcttttctctttctcag---------------------------------------------------t-----------------------------ctgcctagtaaacct--c----------------------------------------------------------------------------------------
i Saguinus_labiatus.k141_285685                          C 0 I 68
s Saguinus_midas.LG03                                    209468391 124 + 209938924 ggccctttgtaaaccagacaccgcc-cctc--aaa-ctgtgtgcaaag-cct-gggg-cactctgccactggcca--gccttcccctttcagaa-tgcc-------gtcttttctctttctcac---------------------------------------------------t-----------------------------ctgcctagtaaacct--c----------------------------------------------------------------------------------------
i Saguinus_midas.LG03                                    C 0 I 68
s Saguinus_mystax.k141_374627                                 7118 124 -      9399 ggccctttgtaaaccagacacggcc-cctc--aaa-ctgtgtgcaaag-cct-gggg-cactctgccactggcca--gccttcccctttcagaa-gccc-------gtgttttctctttctcag---------------------------------------------------t-----------------------------ctgcctagtaaacct--c----------------------------------------------------------------------------------------
i Saguinus_mystax.k141_374627                            C 0 I 68
s Sapajus_apella.ctg103                                    5419783 227 -   5703754 gg-ccttcgtaagccagacaccacc-cctc--gaa-ctgtgcacagag-cct--ggggccctctgccactggccg--gcctttgcctttcagaa-gccc-------c-------cctttctgac---------------------------------------------------tgggagagagctgctctctttctctttctcctgccggttaaacctc-c-act-cctaaactcctccgtgtgcatctgcgtcc-ttaacctccttggcgtgagacgtcgaactacgggtatttacac----cagaca
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          54824 227 -     80660 gg-ccttcgtaagccagacaccacc-cctc--gaa-ctgtgcacagag-cct--ggggccctctgccactggccg--gcctttgcctttcagaa-gccc-------c-------cctttctgac---------------------------------------------------tgggagagagctgctctctttctctttctcctgccggttaaacctc-c-act-cctaaactcctccgtgtgcatctgcgtcc-ttaacctccttggcgtgagacgtcgaactacgggtatttacac----cagaca
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Semnopithecus_entellus.k141_11662                          18727 234 -     19888 ggccttacgtaaattggacaccatcttctc--aagtctgtctataaaa-cct-ggtg-cactctgccacaggtcg--gtctttcgctttcagaa-gccc-------t-------cttctctctcacaggcgagacagctattctcctgtctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-ccgaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      25930 234 +     39453 ggccttacgtaaattggacaccatcttctc--aagtctgtctataaaa-cct-ggtg-cactctgccacaggtcg--gtctttcgctttcagaa-gccc-------t-------cttctctctcacaggcgagacagctattctcctgtctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-ccgaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            6449 234 +     27826 ggccttacgtaaattggacaccatcttctc--aagtctgtctataaaa-cct-ggtg-cactctgccacaggtcg--gtcttccgctttcagaa-gccc-------a-------cttctctctcacaggcgagacagctattctcctgtctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-ccgaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             5970 234 -     19483 ggccttacgtaaattgaacaccatcttctc--aagtctgtctataaaa-cct-ggtg-cactctgccacaggtcg--gtctttcgctttcagaa-gccc-------t-------cttctctctcacaggcgagacagctattctcctgtctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-ctgaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      6038 234 +      7198 ggccttacgtaaattggacaccatcttctc--aagtctgtctataaaa-cct-ggtg-cactctgccacaggtcg--gtctttcgctttcagaa-gccc-------t-------cttctctctcacaggcgagacagctattctcctgtctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-ccgaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         14296 234 +     15514 ggccttacgtaaattggacaccatcttctc--aagtctgtctataaaa-cct-ggtg-cactctgccacaggtcg--gtctttcgctttcagaa-gccc-------t-------cttctctctcacaggcgagacagctattctcctgtctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-ccgaaactcctccatgagtgtctgtgtcc-aaaattgtcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1092512 233 -   1523678 gggccta-gtaaatcggataccacctcctc--aagcctgtctataaaa-cct-ggtg-cactctgccattgacca--gtctttccttttcagaa-gccc-------t-------tctctctctcaccggagggagagctattctcctttctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaactcctccatgagtgtctgtgtcc-taaattttcttggcatgagacaacgaaccccaggtatttacac----cagaca
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Theropithecus_gelada.CM009954.1                        186427619 233 + 186847797 ggccttacgtaaattggacaccatcctctc--aagtctgtctataaa--CCT-GGTG-CACTCTGCCACTGGCCG--GTCTTTCCCTTTCAGAa-gccc-------t-------tctctctctcactggGGAGGCAgctattctcctttctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-cctaaacAACTCCATGAgtgtctgtgtcc-taaatttTCTTGGTGTGAGACAACGTACCCCAAGTATTTACAC----CAGACA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                         10021 234 -     20410 ggccttacgtaaattggacaccatcttctc--aagtctgtctataaaa-cct-ggtg-cactctgccacaggtcg--gtctttcgctttcagaa-gccc-------t-------cttctctctcacaggcgagacagctattctcctgtctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-ccgaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    14217 232 +     15221 ggccttacgtaaactggacaccatcttctc--aagtctgtctataaaa-cct-ggtg-ca--ctgccacaggtcg--gtctttcgctttcagaa-gccc-------t-------cttctctctcacaggcgagacagctattctcctgtctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-ccgaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                       10122 234 +     19930 ggccttacgtaaattggacaccatcttctc--aagtctgtctataaaa-cct-ggtg-cactctgccacaggtcg--gtctttcgctttcagaa-gccc-------t-------cttctctctcacaggcgagacagctattctcctgtctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-ccgaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       6549 234 -     19997 ggccttacgtaaattggacaccatcttctc--aagtctgtctataaaa-cct-ggtg-cactctgccacaggtcg--gtctttcgctttcagaa-gccc-------t-------cttctctctcacaggcgagacagctattctcctgtctcttttt------------------t-----------------------------ctgcctattcaacctc-c-act-ccgaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            46673 234 -     60166 ggccttacgtaaattggacaccatcttctc--aagtctgtctataaaa-cct-ggtg-cactctgccacaggtcg--gtctttcgctttcagaa-gccc-------g-------cttctctctcacaggcgagacagctattctcctgtctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-ccgaaactcctccataagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        14144 234 -     27529 ggccttacgtaaattggacaccatcttctc--aagtctgtctataaaa-cct-ggtg-cactctgccacaggtcg--gtctttcgctctcagaa-gccc-------t-------cttctctctcacaggcgagacagctattctcctgtctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-ccgaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     14088 234 -     18194 ggccttacgtaaattggacaccatcttctc--aagtctgtctataaaa-cct-ggtg-cactctgccacaggtcg--gtctttcgctttcagaa-gccc-------t-------cttctctctcacaggcgagacagctattctcctgtctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-ccgaaactccaccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           7816 234 -     21137 ggccttacgtaaattggacaccatcttctc--aagtctgtctataaaa-cct-ggtg-cactctgccacaggtcg--gtctttcgctttcagaa-gccc-------t-------cttctctctcacaggcgagacagctattctcctgtctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-ccgaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    6519 234 -     10723 ggccttacgtaaattggacaccatcttctc--aagtctgtctataaaa-cct-ggtg-cactctgccacaggtcg--gtctttcgctttcagaa-gccc-------t-------cttctctctcacaggcgagacagctattctcctgtctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-ccgaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         5675 234 +      9834 ggccttacgtaaattggacaccatcttctc--aagtctgtctataaaa-cct-ggtg-cactctgccacaggtcg--gtctttcgctttcagaa-gccc-------t-------cttctctctcacaggcgagacagctattctcctgtctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-ccgaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        23988 234 +     32220 ggccttacgtaaattggacaccatcttctc--aagtctgtctataaaa-cct-gatg-cactctgccacaggtcg--gtctttcgctttcagaa-gccc-------t-------cttctctctcacaggcgagacagctattctcctgtctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-ccgaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5938090 234 +   6242583 ggccttacgtaaactggacaccatcttctc--aagtctgtctataaaa-cct-ggtg-cactctgccacaggtcg--gtctttcgctttcagaa-gccc-------t-------cttctctctcacaggcgagacagctattctcctgtctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-ccgaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        7342 234 +     20839 ggccttacgtaaattggacaccatcttctc--aagtctgtctataaaa-cct-ggtg-cactctgccacaggtcg--gtctttcgctttcagaa-gccc-------t-------cttctctctcacaggcgagacagctattctcctgtctcttttt------------------t-----------------------------ctgcctattaaacctc-c-act-ccgaaactcctccatgagtgtctgtgtcc-taaattttcttggtgtgagacaacgaaccccaagtatttacac----cagaca
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
e Echinops_telfairi.JH980293.1                            48779651 164 + 111700974 I
e Otolemur_garnettii.GL873799.1                             695356   0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         3192   0 +      8798 C
e Galago_senegalensis.k141_631886                             3367   0 +     11339 C
e Galago_moholi.ctg2040                                     425660   0 -    453645 C
e Mus_pahari.LT608297.1                                   31354391   3 -  89631738 I
e Mus_spretus.CM004101.1                                  90751796   3 - 130317789 I
e Mus_musculus.chr8                                       87649735   3 - 129401213 I
e Mus_caroli.LT608237.1                                   84360735   3 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Loris_tardigradus.ctg83                                  1003896   0 +   6120653 C
e Loris_lydekkerianus.k141_2539221                            5046   0 +     11245 C
e Perodicticus_potto.k141_1092580                             7743   0 +     25941 C
e Perodicticus_ibeanus.k141_855320                            9341   0 +     13100 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276   0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      14314   3 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_17732          4470   0 +     86975 C
e Xerus_inauris.XerIna_scaffold_48378                        23707  30 -     24430 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 10099   0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5371183   0 -   5488506 C
e Varecia_variegata.k141_1128296                             10881   0 +     24756 C
e Varecia_rubra.k141_590885                                  10826   0 +     50397 C
e Ursus_maritimus.KK499267.1                               4849738   0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   52652   8 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584   0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     8640   0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2154992   0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641   0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     80241   0 +    610378 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   3761   0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937   0 +    114563 C
e Tarsius_wallacei.k141_254427                                 579   0 -     16117 C
e Tarsius_lariang.k141_2201908                               25744   0 +     70052 C
e Tapirus_terrestris.TapTer_scaffold_755                    386522   0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      118069   0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 71444   0 +    116680 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                 9911   0 +     41958 C
e Sus_scrofa.CM000828.4                                    6809803   0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629              17619   0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             30035   0 +     97271 C
e Spermophilus_dauricus.KZ294078.1                         1952501  34 -   3870691 I
e Sorex_araneus.JH798187.1                                13649961   0 -  18376816 C
e Solenodon_paradoxus.SolPar_flattened_line_126               3065   0 +   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_60841                    11304   0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152480   8 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                87100   0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660   0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570009   3 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968   0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20273641   0 -  38429054 C
e Pteropus_vampyrus.KN525825.1                             1359168   0 +   4952924 C
e Pteropus_alecto.KB030862.1                              22976082   0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         39533   0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            13999   0 -     21811 C
e Psammomys_obesus.NESX01036370.1                             9765   3 -     21651 I
e Propithecus_verreauxi.k141_956661                           4204   0 -      6182 C
e Propithecus_tattersalli.k141_790011                        27982   0 -     67325 C
e Propithecus_perrieri.k141_1200571                           4160   0 -     24134 C
e Propithecus_edwardsi.k141_1176054                          25972   0 +     35766 C
e Propithecus_diadema.k141_58108                               496   0 -     13098 C
e Propithecus_coronatus.k141_347390                          28451   0 +     38485 C
e Propithecus_coquerelli.NW_012148875.1                     990141   0 +   2598838 C
e Prolemur_simus.MPIZ01000396.1                            2596171   0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                 12252   8 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090   0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             1144   0 +     22620 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384   0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813   0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18194143   3 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690  60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11948   0 -     78924 C
e Pantholops_hodgsonii.KE114653.1                          1265385   0 -   2937107 C
e Panthera_tigris.KE722367.1                               4720331   0 -   8748460 C
e Panthera_pardus.KV860321.1                                263693   0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  150487   0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468   0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491   0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       461654   0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                        67146393   0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               9108   0 -     18566 C
e Orcinus_orca.KB316932.1                                  2782345   0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    79522   3 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                    3605   3 -     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229   0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831   4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              505962   0 -   2017862 C
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1362720   0 +   3988456 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749294   0 + 199412804 C
e Nycticebus_coucang.k141_771082                               718   0 -      2667 C
e Nycticebus_bengalensis.LG01                            102578873   0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9148686   0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183   0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422   0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20306277   0 +  31847680 C
e Nannospalax_galili.KL204047.1                            2033219   3 -   3037898 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              188089   0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_28916                        33307   0 +     33610 C
e Myotis_lucifugus.GL429869.1                              3902752   0 -   4330536 C
e Myotis_davidii.KB100139.1                                1586680   0 -   6019432 C
e Myotis_brandtii.KE162005.1                                278987   0 -  10118263 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Mustela_putorius.JH418006.1                               300511   0 -  14710649 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           5814   0 +     14753 C
e Mungos_mungo.MunMun_flattened_line_23663                   34730   0 +     37127 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379  13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 140657   0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    27466   0 -    437263 C
e Mirza_zaza.k141_952172                                      8439   0 -     37649 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         5023   0 -      8324 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             33619   0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1849942   0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                14711   0 -     19307 C
e Microgale_talazaci.MicTal_scaffold_6613                    20915   0 -    145209 C
e Microcebus_murinus.CM007674.1                           18290893   0 -  93316391 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961   0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12181614   3 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 32131   3 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365              9333   0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                         9635   3 -    207569 I
e Marmota_marmota.CZRN01000018.1                          33101614  35 -  40650429 I
e Manis_pentadactyla.KN006162.1                              50341   0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352   0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 89911   0 +     94391 C
e Lycaon_pictus.CM007581.1                                17954432   0 -  59628241 C
e Loxodonta_africana.GL010049.1                            4216402   0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344   0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     5564   0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3042155   0 +   3914936 C
e Lepilemur_septentrionalis.k141_185316                      26379   0 +     54090 C
e Lepilemur_ruficaudatus.k141_121139                           988   0 +     25010 C
e Lepilemur_dorsalis.k141_577674                             28443   0 +     45836 C
e Lepilemur_ankaranensis.k141_596936                         10377   0 -     23766 C
e Lemur_catta.scaffold_24                                 15523493   0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    13159   0 -     42476 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650   0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493   0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293   0 +     23964 C
e Indri_indri.k141_3655594                                   21945   0 +     31101 C
e Ictidomys_tridecemlineatus.JH393364.1                    7519304  37 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      81626   0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547   0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  43778   0 +     55795 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604   0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173   0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577   3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_596025                  53   8 +       452 I
e Heterocephalus_glaber.JH602082.1                        20660051   0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516   0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               241618   0 +    327341 C
e Hapalemur_occidentalis.k141_907772                         12988   0 -     16460 C
e Hapalemur_meridionalis.k141_248335                         13150   0 -     41752 C
e Hapalemur_griseus.k141_1511508                             13049   0 +     18253 C
e Hapalemur_gilberti.k141_488810                             11410   0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           6261   0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312   0 -    660261 C
e Galeopterus_variegatus.GalVar_scaffold_108840                487   0 -      9135 C
e Galagoides_demidoff.k141_1711393                             670   0 +     41679 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  8642   0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20195128   0 + 205367284 C
e Eulemur_sanfordi.k141_1122526                              13181   0 +    111500 C
e Eulemur_rufus.k141_1476633                                  3606   0 -     17153 C
e Eulemur_rubriventer.k141_571033                            12988   0 +     26496 C
e Eulemur_mongoz.k141_232305                                 10068   0 +     97555 C
e Eulemur_macaco.k141_1562045                                12132   0 +     75513 C
e Eulemur_fulvus.k141_544389                                 13371   0 +     23973 C
e Eulemur_flavifrons.k141_1184614                            12132   0 +     26330 C
e Eulemur_coronatus.k141_885031                              14932   0 -     25546 C
e Eulemur_collaris.k141_377015                                5904   0 -     16928 C
e Eulemur_albifrons.k141_342033                              13205   0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689   0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752   0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Equus_przewalskii.KK951119.1                               32494   0 +    498745 C
e Equus_caballus.CM000403.2                               18530479   0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1282658   0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2144750   0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16328616   0 -  41312741 C
e Ellobius_talpinus.LOJH01109367.1                             607   3 +      6299 I
e Ellobius_lutescens.LOEQ01008920.1                          90425   3 +    110024 I
e Elephantulus_edwardii.JH947257.1                         1090636   0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347   0 +    607251 C
e Eidolon_helvum.KE759718.1                                   9826   0 +     11740 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175   0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084   0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    5348   0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  672595   0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8629170   0 +  20541912 C
e Delphinapterus_leucas.KZ290073.1                        16812076   0 +  35494412 C
e Daubentonia_madagascariensis.ctg71                      12536717   0 -  12879189 C
e Dasypus_novemcinctus.JH564415.1                            62473   5 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923   0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569   0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    836510   0 +   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129             27783   0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_37019               1902   0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11666932   3 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 49454   3 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          13616   0 -     20389 C
e Condylura_cristata.JH655891.1                           17547413   8 -  53390261 I
e Colobus_guereza.LG01                                   199948958   0 + 200372422 C
e Choloepus_hoffmanni.KN194906.1                            172269   0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 17169   0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1251498   0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           15854   0 +     57038 C
e Cheirogaleus_major.k141_333249                             20487   0 -     52598 C
e Chaetophractus_vellerosus.ChaVel_scaffold_713168             206   0 -      2554 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1772   0 -     25243 C
e Cephalopachus_bancanus.k141_1423433                         4751   0 +     31688 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291   0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417   0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157   0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     92315   0 +    217609 C
e Castor_canadensis.CasCan_scaffold_2074                    136758   0 +    179628 C
e Carollia_perspicillata.CarPer_scaffold_92756                4154   0 -     11696 C
e Carlito_syrichta.NW_007247396.1                           200736   0 +    308752 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030   0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310   0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18499704   0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17958192   0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9033927   0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    184541   0 -    185531 C
e CanFam4.chr16                                           17798484   0 -  60362399 C
e Camelus_ferus.KB017975.1                                  402438   0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2334155   0 -   7040546 C
e Camelus_bactrianus.KN276810.1                           10001697   0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2819682   0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014   0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932   0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376   0 +  48749331 C
e Bison_bison.KN261452.1                                    200171   0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115   0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905   0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440   0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              53729   0 +     85213 C
e Avahi_laniger.k141_765380                                  53100   0 -     92717 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  3791   0 +     43469 C
e Arctocebus_calabarensis.k141_2318572                       10712   0 +     14667 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      11194  23 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675   0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      184379   0 +    412891 C
e Ammotragus_lervia.NIVO01071767.1                          676192   0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74034   3 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             78649   0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9509878   0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_11939                     24695   3 -     89785 I
e Acinonyx_jubatus.LLWD01001279.1                           826634   0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6042 24 +     62944 atgtcactgcttcat----t-a-t------------t--------aagtT
s Acinonyx_jubatus.LLWD01001279.1                           826634 14 -   1699592 --------------CTAT-T-TCT------------T--------Aagtc
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_11939                     24698 10 -     89785 --------------C----T-A-C------------T--------AAGTT
i Acomys_cahirinus.AcoCah_scaffold_11939                 I 3 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9509878 13 -  29979442 --------------c-aatt-t-t------------t--------aaatt
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             78649 13 -    347723 --------------CAAT-T-T-T------------T--------AAGTT
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     74037 10 -     89534 --------------C----T-A-T------------A--------AAATT
i Allactaga_bullata.AllBul_scaffold_9566                 I 3 C 0
s Allenopithecus_nigroviridis.k141_3361533                   13959 24 -     52922 atgttgtcacttcaT----T-A-T------------T--------AAATT
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         13901 24 -     28001 atgttgtcacttcaT----T-A-T------------T--------AAATT
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          4397 24 -     18505 atgttgtcacttcaT----T-A-T------------T--------AAATT
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           5250 24 -     12518 atgttgtcacttcaT----T-A-T------------T--------AAATT
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                              2699 24 -     27731 atgacgccacgtcaT----T-A-T------------T--------AAGTT
i Alouatta_belzebul.k141_3238538                         C 0 I 7
s Alouatta_caraya.k141_1743867                                2828 25 +      3134 atgacgccacgtcaT----TTA-T------------T--------AAGTT
i Alouatta_caraya.k141_1743867                           C 0 I 7
s Alouatta_discolor.k141_743489                               2959 24 -     45847 atgacgccacgtcaT----T-A-T------------T--------AAGTT
i Alouatta_discolor.k141_743489                          C 0 I 7
s Alouatta_juara.k141_1509701                                24166 24 +     25266 atggcgccacgtcaT----T-A-T------------T--------AAGTT
i Alouatta_juara.k141_1509701                            C 0 I 7
s Alouatta_nigerrima.k141_3472759                            17464 24 -     18578 atgacgccacgtcaT----T-A-T------------T--------AAGTT
i Alouatta_nigerrima.k141_3472759                        C 0 I 7
s Alouatta_palliata.k141_2135620                              2853 24 +     47717 atgacgccacgtcaT----T-A-T------------T--------AAGTT
i Alouatta_palliata.k141_2135620                         C 0 I 7
s Alouatta_puruensis.k141_1253230                             2963 24 -      3544 atggcgccacgtcaT----T-A-T------------T--------AAGTT
i Alouatta_puruensis.k141_1253230                        C 0 I 7
s Alouatta_seniculus.k141_117119                             14186 24 +     50774 atgatgccacgtcaT----T-A-T------------T--------AAGTT
i Alouatta_seniculus.k141_117119                         C 0 I 7
s Anoura_caudifer.AnoCau_scaffold_1412                      184379 10 +    412891 --------------C----A-T-T------------T--------AAATT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  14817 24 -     33861 atgacgccacttcaT----T-A-T------------T--------AAGTC
i Aotus_azarae.k141_3104676                              C 0 I 5
s Aotus_griseimembra.k141_2240599                            14837 24 -     34016 atgacgccacttcaT----T-A-T------------T--------AAGTC
i Aotus_griseimembra.k141_2240599                        C 0 I 5
s Aotus_nancymaae.KZ198451.1                               4297234 24 -   5030052 atgacgccacttcat----t-a-t------------t--------aAGTC
i Aotus_nancymaae.KZ198451.1                             C 0 I 5
s Aotus_trivirgatus.k141_2152450                             14839 24 -     34685 atgacgccacttcaT----T-A-T------------T--------AAGTC
i Aotus_trivirgatus.k141_2152450                         C 0 I 5
s Aotus_vociferans.k141_344750                               27963 24 -     47192 atgacgccacttcaT----T-A-T------------T--------AAGTC
i Aotus_vociferans.k141_344750                           C 0 I 5
s Aplodontia_rufa.AprRuf_scaffold_68852                      11217 10 +     20879 --------------C----T-A-T------------T--------AAATT
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 23 C 0
s Arctocebus_calabarensis.k141_2318572                       10712 10 +     14667 --------------C----T-A-T------------T--------AAGTT
i Arctocebus_calabarensis.k141_2318572                   C 0 I 8
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3791 10 +     43469 --------------C----A-T-T------------T--------AAGTT
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  53100 10 -     92717 --------------C----T-A-T------------T--------AAGTT
i Avahi_laniger.k141_765380                              C 0 I 8
s Avahi_peyrierasi.k141_1424874                              53729 10 +     85213 --------------C----T-A-T------------T--------AAGTT
i Avahi_peyrierasi.k141_1424874                          C 0 I 8
s Callibella_humilis.k141_1278103                             4569 24 -     10423 atgacaccacttcaC----T-A-T------------G--------AAGTT
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             24044 24 +     31915 atgacgccacttcaC----T-A-T------------T--------AAGTT
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            4535 24 +      5267 atgacgccacttcaC----T-A-T------------G--------AAGTT
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23589749 24 - 189096842 ATGACACCACTTCAC----T-A-T------------G--------AAGTT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             11279 24 -     12001 atgacaccacttcaC----T-A-T------------G--------AAGTT
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10001697 10 -  17673402 --------------C----T-A-T------------t--------aagtc
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334155 10 -   7040546 --------------C----T-A-T------------t--------aagtc
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  402438 10 -   1652518 --------------C----T-A-T------------t--------aagtc
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17798484 13 -  60362399 --------------CTAT-T-T-T------------T--------AAGTT
i CanFam4.chr16                                          C 0 I 9
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184541 13 -    185531 --------------CTAT-T-T-T------------T--------AAGTT
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 I 9
s Canis_lupus_dingo.QKWQ01000480.1                         9033927 13 -   9314153 --------------CTAT-T-T-T------------T--------aagtt
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 9
s Canis_lupus_familiaris.chr16                            17958192 13 -  59632846 --------------CTAT-T-T-T------------T--------aagtt
i Canis_lupus_familiaris.chr16                           C 0 I 9
s Canis_lupus_orion.HG994398.1                            18499704 13 +  63665305 --------------CTAT-T-T-T------------T--------aagtt
i Canis_lupus_orion.HG994398.1                           C 0 I 9
s Carlito_syrichta.NW_007247396.1                           200736 10 +    308752 --------------C----T-A-T------------T--------AAATT
i Carlito_syrichta.NW_007247396.1                        C 0 I 29
s Carollia_perspicillata.CarPer_scaffold_92756                4154 10 -     11696 --------------C----A-T-T------------T--------AAGTT
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     92315 10 +    217609 --------------C----T-A-T------------T--------AAGTT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 7
s Cebuella_niveiventris.k141_1251222                          9194 24 -     11392 atgacgccacttcaC----T-A-T------------G--------AAGTT
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               5292 24 -      7577 atgatgccacttcaC----T-A-T------------G--------AAGTT
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25651345 24 +  26074798 atgacgccacttcaT----T-A-T------------T--------AAGTT
i Cebus_albifrons.Contig27                               I 81 C 0
s Cebus_olivaceus.k141_398305                                  922 24 +      1777 atgacgccacttcaT----T-A-T------------T--------AAGTT
i Cebus_olivaceus.k141_398305                            I 226 C 0
s Cebus_unicolor.k141_544048                                 49254 24 -     74725 atgacgccacttcaT----T-A-T------------T--------AAGTT
i Cebus_unicolor.k141_544048                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         4751 10 +     31688 --------------C----T-A-T------------T--------AAATT
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12230745 10 +  27778364 --------------C----C-A-T------------T--------aagtt
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1772 10 -     25243 --------------C----C-A-T------------T--------AAGTT
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4474912 24 +   4669795 atgttgtcgcttcaT----T-A-T------------T--------AAATT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        13457 24 -     19203 atgttgtcgcttcaT----T-A-T------------T--------AAATT
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           7883 24 +      8260 atgttgtcacttcaT----T-A-T------------T--------AAATT
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           8109 24 +     27781 atgttgtcgcttcaT----T-A-T------------T--------AAATT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         8269 24 -     20310 gtattgtcgcttcaT----T-A-T------------T--------AAATT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          11248 24 +     29689 atattgtcgcttcaT----T-A-T------------T--------AAATT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            5677 24 +      9989 atgttgtcgcttcaT----T-A-T------------T--------AAATT
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          13927 24 -     27936 atgttgtcgcttcaT----T-A-T------------T--------AAATT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            2793 24 -     17152 atgttgtcgcttcaT----T-A-T------------T--------AAATT
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38816327 24 +  39242232 atgttgttgcttcaT----T-A-T------------T--------AAATT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222022 24 -  21565898 atgttgtcgcttcaT----T-A-T------------T--------AAATT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       39140 24 -     53127 atgttgtcgcttcaT----T-A-T------------T--------AAATT
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        6408 24 +      7159 atgttgttgcttcaT----T-A-T------------T--------AAATT
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       13943 24 -     27947 atgttgtcgcttcaT----T-A-T------------T--------AAATT
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         13916 24 +     17596 atgttgtcgcttcaT----T-A-T------------T--------AAATT
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          3150 24 +     26000 atgttgtcgcttcaT----T-A-T------------T--------AAATT
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             20487 10 -     52598 --------------C----T-A-T------------T--------AAGTT
i Cheirogaleus_major.k141_333249                         C 0 I 8
s Cheirogaleus_medius.k141_1055463                           15854 10 +     57038 --------------C----T-A-T------------T--------AAGTT
i Cheirogaleus_medius.k141_1055463                       C 0 I 8
s Chiropotes_albinasus.k141_2813271                          10446 21 +     11226 a---cACCAGTTCAC----T-A-T------------T--------AAGTT
i Chiropotes_albinasus.k141_2813271                      I 69 I 7
s Chlorocebus_aethiops.ctg25                              18427901 24 -  18827391 atgttgtcacttcaT----T-A-T------------T--------AAATT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       14338 24 -     50209 atgttgtcacttcaT----T-A-T------------T--------AAATT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135421338 24 + 135778131 atgttgtcacttcat----t-a-T------------T--------AAATT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 17169  4 +     19366 --------------T----T-A-T--------------------------
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 I 12
s Choloepus_hoffmanni.KN194906.1                            172269  4 +    839153 --------------T----t-a-t--------------------------
i Choloepus_hoffmanni.KN194906.1                         C 0 I 12
s Colobus_angolensis.KN981557.1                            1909854 24 +   2368649 atgttgccgcttcat----t-a-T------------T--------AAATT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_polykomos.k141_906115                              36392 24 +     84244 atgttgccgcttcaT----T-A-T------------T--------AAATT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          13616 10 -     20389 --------------C----T-A-A------------T--------AAGTT
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 49457 10 +     63868 --------------C----T-A-C------------C--------AAGTT
i Cricetomys_gambianus.CriGam_scaffold_18520             I 3 C 0
s Cricetulus_griseus.LT883664.1                           11666935 10 + 224834208 --------------C----T-A-C------------T--------AAGTT
i Cricetulus_griseus.LT883664.1                          I 3 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               1902 28 -     19598 -------------------A-A-TTATTGCTACAATTATGT-TTTAAGAT
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27783 14 -     87169 --------------CTAT-T-TCT------------T--------AAGTC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    836510 10 +   1526836 --------------T----T-A-T------------T--------AAGCT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12536717 10 -  12879189 --------------C----T-A-T------------T--------ATGTT
i Daubentonia_madagascariensis.ctg71                     C 0 I 8
s Desmodus_rotundus.KZ672289.1                             8629170 10 +  20541912 --------------C----A-T-T------------T--------cagtt
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672595 10 +   1390856 --------------C----C-A-T------------T--------aagtt
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    5348 10 +    198055 --------------C----C-A-T------------T--------AAGTT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE759718.1                                   9826 10 +     11740 --------------c----t-a-a------------a--------atgtt
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1090636 21 +  10337057 --------------t----g-c-a-tagggttgctat--------gagta
i Elephantulus_edwardii.JH947257.1                       C 0 I 6404
s Ellobius_lutescens.LOEQ01008920.1                          90428 10 +    110024 --------------C----T-A-C------------T--------AAGTT
i Ellobius_lutescens.LOEQ01008920.1                      I 3 C 0
s Ellobius_talpinus.LOJH01109367.1                             610 10 +      6299 --------------C----T-A-C------------T--------AAGTT
i Ellobius_talpinus.LOJH01109367.1                       I 3 C 0
s Enhydra_lutris.KZ291758.1                               16328616 13 -  41312741 --------------CAAT-T-T-T------------T--------aagtt
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144750 10 -  14770903 --------------C----T-A-T------------T--------aagtt
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1282658 10 +   4378816 --------------C----C-A-T------------T--------aagtt
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18530479 10 -  39960074 --------------C----C-A-T------------t--------aagtt
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               32494 10 +    498745 --------------C----C-A-T------------T--------aagtt
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21204508 24 -  21539334 atgttgtcacttcaT----T-A-T------------T--------AAATT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13205 10 -     14127 --------------T----T-A-T------------T--------AAGTT
i Eulemur_albifrons.k141_342033                          C 0 I 8
s Eulemur_collaris.k141_377015                                5904 10 -     16928 --------------T----T-A-T------------T--------AAGTT
i Eulemur_collaris.k141_377015                           C 0 I 8
s Eulemur_coronatus.k141_885031                              14932 10 -     25546 --------------T----T-A-T------------T--------AAGTT
i Eulemur_coronatus.k141_885031                          C 0 I 8
s Eulemur_flavifrons.k141_1184614                            12132 10 +     26330 --------------T----T-A-T------------T--------AAGTT
i Eulemur_flavifrons.k141_1184614                        C 0 I 8
s Eulemur_fulvus.k141_544389                                 13371 10 +     23973 --------------T----T-A-T------------T--------AAGTT
i Eulemur_fulvus.k141_544389                             C 0 I 8
s Eulemur_macaco.k141_1562045                                12132 10 +     75513 --------------T----T-A-T------------T--------AAGTT
i Eulemur_macaco.k141_1562045                            C 0 I 8
s Eulemur_mongoz.k141_232305                                 10068 10 +     97555 --------------T----T-A-T------------T--------AAGTT
i Eulemur_mongoz.k141_232305                             C 0 I 8
s Eulemur_rubriventer.k141_571033                            12988 10 +     26496 --------------T----T-A-T------------T--------AAGTT
i Eulemur_rubriventer.k141_571033                        C 0 I 8
s Eulemur_rufus.k141_1476633                                  3606 10 -     17153 --------------T----T-A-T------------T--------AAGTT
i Eulemur_rufus.k141_1476633                             C 0 I 8
s Eulemur_sanfordi.k141_1122526                              13181 10 +    111500 --------------T----T-A-T------------T--------AAGTT
i Eulemur_sanfordi.k141_1122526                          C 0 I 8
s Felis_catus.CM001381.2                                  20236285 14 + 206538554 --------------CTAT-T-TCT------------T--------AAGtc
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195128 14 + 205367284 --------------CTAT-T-TCT------------T--------AAGtc
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  8642 14 -     36744 --------------CTAT-T-TCT------------T--------AAGTC
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     425660 10 -    453645 --------------C----T-A-T------------A--------AAGTT
i Galago_moholi.ctg2040                                  C 0 I 8
s Galago_senegalensis.k141_631886                             3367 10 +     11339 --------------C----T-A-T------------A--------AAGTT
i Galago_senegalensis.k141_631886                        C 0 I 8
s Galagoides_demidoff.k141_1711393                             670 10 +     41679 --------------C----T-A-T------------A--------AAGTT
i Galagoides_demidoff.k141_1711393                       C 0 I 8
s Galeopterus_variegatus.GalVar_scaffold_108840                487 10 -      9135 --------------C----T-A-T------------T--------AAATT
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              15297 24 -     32273 atgtcactgcttcaT----T-A-T------------T--------AAGTT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186337443 24 + 186649187 atgtcactgcttcaT----T-A-T------------T--------AAGtt
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6261 10 -     19426 --------------T----T-A-T------------T--------AAGTT
i Hapalemur_alaotrensis.k141_170648                      C 0 I 8
s Hapalemur_gilberti.k141_488810                             11410 10 -     15286 --------------T----T-A-T------------T--------AAGTT
i Hapalemur_gilberti.k141_488810                         C 0 I 8
s Hapalemur_griseus.k141_1511508                             13049 10 +     18253 --------------T----T-A-T------------T--------AAGTT
i Hapalemur_griseus.k141_1511508                         C 0 I 8
s Hapalemur_meridionalis.k141_248335                         13150 10 -     41752 --------------T----T-A-T------------T--------AAGTT
i Hapalemur_meridionalis.k141_248335                     C 0 I 8
s Hapalemur_occidentalis.k141_907772                         12988 10 -     16460 --------------T----T-A-T------------T--------AAGTT
i Hapalemur_occidentalis.k141_907772                     C 0 I 8
s Helogale_parvula.HelPar_flattened_line_2585               241618 13 +    327341 --------------CCA--T-TCT------------T--------AAGTC
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_596025                  61  3 +       452 -----------------------------------------------gct
i Heterohyrax_brucei.HetBruBak_scaffold_596025           I 8 I 80
s Hoolock_leuconedys.ctg274                                    434110 24 +    630532 atgtcaccgcttcaT----T-A-T------------T--------AAGTT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  43778 14 +     55795 --------------CTA-CT-TCT------------C--------AAGTC
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_232023                                1876 24 -     12752 gtgtcactgcttcaT----T-A-T------------T--------AAGTT
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                               1920 24 +     14092 gtgtcactgcttcaT----T-A-T------------T--------AAGTT
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189542703 24 - 191637585 gtgtcactgcttcaT----T-A-T------------T--------AAGTT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3335598 24 -  11177569 gtgtcactgcttcaT----T-A-T------------T--------AAGTT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7519341 10 -   7955117 --------------C----T-A-T------------T--------aagtc
i Ictidomys_tridecemlineatus.JH393364.1                  I 37 I 7
s Indri_indri.k141_3655594                                   21945 10 +     31101 --------------C----T-A-T------------T--------AAGTT
i Indri_indri.k141_3655594                               C 0 I 8
s Lasiurus_borealis.LasBor_scaffold_32767                    13159 10 -     42476 --------------C----T-A-T------------T--------AAATT
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15523493 10 -  30322482 --------------T----T-A-T------------T--------AAGTT
i Lemur_catta.scaffold_24                                C 0 I 8
s Leontocebus_fuscicollis.k141_1820339                        6826 22 +     64341 --gacgCCAGTTCAC----T-A-T------------T--------AAGTC
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           4153 22 +      4941 --gacgCCAGTTCAC----T-A-T------------T--------AAGTC
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        6869 22 +     35603 --gacgCCAGTTCAC----T-A-T------------T--------AAGTC
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    28344 24 +     38576 atgacaccacttcaC----T-A-T------------T--------AAGTT
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         25041 24 +     66356 atgacaccacttcaC----T-A-T------------T--------AAGTT
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         10377 10 -     23766 --------------C----T-A-T------------G--------AAGTT
i Lepilemur_ankaranensis.k141_596936                     C 0 I 7
s Lepilemur_dorsalis.k141_577674                             28443 10 +     45836 --------------C----T-A-T------------G--------AAGTT
i Lepilemur_dorsalis.k141_577674                         C 0 I 7
s Lepilemur_ruficaudatus.k141_121139                           988 10 +     25010 --------------C----T-A-T------------T--------AAGTT
i Lepilemur_ruficaudatus.k141_121139                     C 0 I 8
s Lepilemur_septentrionalis.k141_185316                      26379 10 +     54090 --------------C----T-A-T------------G--------AAGTT
i Lepilemur_septentrionalis.k141_185316                  C 0 I 7
s Leptonychotes_weddellii.KB714746.1                       3042155 13 +   3914936 --------------CAAT-T-T-T------------T--------aagtt
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     5564  5 -     14121 ---------------------------------------------AATTT
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1436459 24 +   1826925 atgttgtcgcttcaT----T-A-T------------T--------AAATT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5046 10 +     11245 --------------C----T-A-T------------T--------AAGTT
i Loris_lydekkerianus.k141_2539221                       C 0 I 8
s Loris_tardigradus.ctg83                                  1003896 10 +   6120653 --------------C----T-A-T------------T--------AAGTT
i Loris_tardigradus.ctg83                                C 0 I 8
s Loxodonta_africana.GL010049.1                            4216402 21 -  43346337 --------------c----a-c-a-tggggtcaccat--------gagtt
i Loxodonta_africana.GL010049.1                          C 0 I 57
s Lycaon_pictus.CM007581.1                                17954432 13 -  59628241 --------------CTAT-T-T-T------------T--------aagtt
i Lycaon_pictus.CM007581.1                               C 0 I 9
s Macaca_arctoides.k141_2326796                               6267 24 +     40492 atgttgtcgcttcaT----T-A-T------------T--------AAATT
i Macaca_arctoides.k141_2326796                          I 4 C 0
s Macaca_assamensis.Contig5                               59675528 24 +  60120075 atgttgtcgcttcaT----T-A-T------------T--------AAATT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 12040 24 -     26193 atgttgtcgcttcaT----T-A-T------------T--------AAATT
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            79823 24 -    114318 atgttgtcgcttcaT----T-A-T------------T--------AAATT
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  5514 24 -     23192 atgttgtcgcttcaT----T-A-T------------T--------AAATT
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                14985 24 -     29190 atgttgtcgcttcaT----T-A-T------------T--------AAATT
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  23550 24 +     37952 atgttgtcgcttcaT----T-A-T------------T--------AAATT
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186838638 24 + 187317192 ATGTTGTCGCTTCAT----T-A-T------------T--------AAATT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25457202 24 -  25927173 ATGTTGTCGCTTCAT----T-A-T------------T--------AAATT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  79401 24 +     89720 atgttgtcgcttcaT----T-A-T------------T--------AAATT
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 6399 24 +     20474 atgttgtcgcttcaT----T-A-T------------T--------AAATT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   6199 24 -     14993 atgttgtcgcttcaT----T-A-T------------T--------AAATT
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  329065 24 -    668171 atgttgtcgcttcaT----T-A-T------------T--------AAATT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 4514 24 -     24072 atgttgtcgcttcaT----T-A-T------------T--------AAATT
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               25138 24 -     45290 atgttgtcgcttcaT----T-A-T------------T--------AAATT
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 89911 10 +     94391 --------------C----T-A-A------------A--------ATGTT
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23936734 24 -  24302211 atgttgtcgcttcaT----T-A-T------------T--------AAATT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               350862 24 +    752769 atgttgtcgcttcaT----T-A-T------------T--------AAATT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33101649 10 -  40650429 --------------C----T-A-T------------T--------aagtc
i Marmota_marmota.CZRN01000018.1                         I 35 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         9638  4 -    207569 ----------------------------------------------AGTT
i Megaderma_lyra.MegLyr_scaffold_4542                    I 3 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              9333 13 +     13704 --------------CAAT-T-T-T------------T--------AAGTT
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 32134 10 +    140813 --------------C----A-A-C------------T--------AAGTT
i Meriones_unguiculatus.MerUng_scaffold_7390             I 3 C 0
s Mesocricetus_auratus.KB708134.1                         12181617 10 -  29670104 --------------C----T-T-C------------T--------AAGTT
i Mesocricetus_auratus.KB708134.1                        I 3 C 0
s Mico_argentatus.k141_1239457                                5109 24 -      7380 atgacaccacttcaC----T-A-T------------G--------AAGTT
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               4182 24 +     18990 atgacgccacttcaC----T-A-T------------G--------AAGTT
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      5121 24 -      7356 atgacaccacttcaC----T-A-T------------G--------AAGTT
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18290893 10 -  93316391 --------------C----t-a-t------------t--------acttt
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                14711 10 -     19307 --------------C----A-C-T------------T--------AAGTT
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849942 10 +   8254450 --------------C----T-A-T------------t--------aagtt
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             33619 10 +     64694 --------------C----T-A-T------------T--------AAGTT
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           8456 21 -     28506 a---tgtcgcttcaT----T-A-T------------T--------AAATT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         5023 13 -      8324 --------------CAAT-T-T-T------------T--------AAGTT
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      8439 10 -     37649 --------------C----T-A-T------------T--------AAGTT
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140657 10 -    366855 --------------C----T-T-T------------T--------AAGTT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   34730 15 +     37127 --------------CTATAT-TCT------------T--------AAGTC
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5814 10 +     14753 --------------C----T-A-T------------T--------AAGTT
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84360738 10 - 120012414 --------------C----T-A-C------------T--------AAGTT
i Mus_caroli.LT608237.1                                  I 3 C 0
s Mus_musculus.chr8                                       87649738 10 - 129401213 --------------C----T-A-C------------T--------AAGTT
i Mus_musculus.chr8                                      I 3 C 0
s Mus_pahari.LT608297.1                                   31354394 10 -  89631738 --------------C----T-A-C------------T--------AAGTT
i Mus_pahari.LT608297.1                                  I 3 C 0
s Mus_spretus.CM004101.1                                  90751799 10 - 130317789 --------------C----T-A-C------------T--------AAGtt
i Mus_spretus.CM004101.1                                 I 3 C 0
s Mustela_putorius.JH418006.1                               300511 13 -  14710649 --------------CAAT-T-T-T------------C--------aagtt
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                278987 10 -  10118263 --------------C----T-A-T------------T--------aagtt
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1586680 10 -   6019432 --------------C----T-A-T------------T--------aagtt
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902752 10 -   4330536 --------------C----T-A-T------------T--------aagtt
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        33307 10 +     33610 --------------C----T-A-T------------T--------AAGTT
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              188089  4 +    196477 --------------T----T-A-C--------------------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 I 10
s Nannospalax_galili.KL204047.1                            2033222 10 -   3037898 --------------C----T-A-C------------T--------AAGTT
i Nannospalax_galili.KL204047.1                          I 3 C 0
s Nasalis_larvatus.k141_413338                               14449 24 +     21681 atgttgccgcttcaT----T-A-T------------T--------AAATT
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306277 13 +  31847680 --------------CAAT-T-T-T------------T--------aagtt
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9148686 13 -   9404916 --------------c-tatt-t-t------------t--------aagtt
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 9
s Nycticebus_bengalensis.LG01                            102578873 10 - 196305487 --------------C----T-A-T------------T--------AAGTT
i Nycticebus_bengalensis.LG01                            C 0 I 8
s Nycticebus_coucang.k141_771082                               718 10 -      2667 --------------C----T-A-T------------T--------AAGTT
i Nycticebus_coucang.k141_771082                         C 0 I 8
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749294 10 + 199412804 --------------C----T-A-T------------T--------AAATT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 8
s Ochotona_princeps.JH802162.1                             1362720  5 +   3988456 ---------------------------------------------AATTT
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              505962 13 -   2017862 --------------CAAT-T-T-T------------T--------aagtt
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                    3608 10 -     28053 --------------C----T-A-T------------T--------AAGTT
i Ondatra_zibethicus.OndZib_scaffold_46174               I 3 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    79525 10 +    102263 --------------C----T-A-C------------T--------AAGCT
i Onychomys_torridus.OnyTor_scaffold_2986                I 3 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9108 21 -     18566 --------------c----a-c-a-tagggtcaccat--------gagtt
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 I 62
s Oryctolagus_cuniculus.CM000791.1                        67146393  5 + 174332312 ---------------------------------------------AATTT
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       461654 13 -    559221 --------------CTAT-T-T-T------------T--------aagtt
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 9
s Otolemur_crassicaudatus.k141_222918                         3192 10 +      8798 --------------C----T-A-T------------A--------AATTT
i Otolemur_crassicaudatus.k141_222918                    C 0 I 8
s Otolemur_garnettii.GL873799.1                             695356 10 -   1103335 --------------C----T-a-t------------a--------aattt
i Otolemur_garnettii.GL873799.1                          C 0 I 8
s Pan_paniscus.KQ411613.1                                    43390 24 +     80009 atgtcaccgcttcat----t-a-t------------T--------AAGtt
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189142299 24 + 189151597 atgtcaccgcttcat----t-A-T------------T--------AAGtt
i Pan_troglodytes.CM009242.2                             I 234 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  150487 14 +    230217 --------------CTAT-T-TCT------------T--------AAGTC
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                263693 14 +  18783137 --------------CTAT-T-TCT------------T--------aagtc
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4720331 14 -   8748460 --------------CTAT-T-TCT------------T--------aagtc
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183442482 24 + 183742232 atgttgtcgcttcat----t-a-t------------t--------AAATT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             6180 24 +     20448 atgttgtcgcttcaT----T-A-T------------T--------AAATT
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20562988 24 +  20919399 atgttgtcgcttcaT----T-A-T------------T--------AAATT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   4924 24 +     41871 atgttgtcgcttcaT----T-A-T------------T--------AAATT
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     8209 24 +     27711 atgttgtcgcttcaT----T-A-T------------T--------AAATT
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  8287 24 +      9205 atgttgtcgcttcaT----T-A-T------------T--------AAATT
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11948 14 -     78924 --------------CTAT-C-TCT------------A--------AAGTC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            9341 10 +     13100 --------------C----T-A-T------------T--------AAGTT
i Perodicticus_ibeanus.k141_855320                       C 0 I 8
s Perodicticus_potto.k141_1092580                             7743 10 +     25941 --------------C----T-A-T------------T--------AAGTT
i Perodicticus_potto.k141_1092580                        C 0 I 8
s Peromyscus_maniculatus.KI615324.1                       18194146  8 -  18517816 --------------C----T-A-C------------T----------GTT
i Peromyscus_maniculatus.KI615324.1                      I 3 C 0
s Piliocolobus_badius.k141_1234363                           42952 24 +     62158 atgttgctgcttcaT----T-A-T------------T--------AAATT
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        37683 24 +     89929 atgttgccgcttcaT----T-A-T------------T--------AAATT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            39099 24 +     51399 atgttgccgcttcaT----T-A-T------------T--------AAATT
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14295337 24 -  14605196 atgttgccgcttcat----t-a-t------------T--------AAATT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1144 10 +     22620 --------------C----T-A-C------------T--------AAGTT
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189130430 24 + 189387572 atgtcaccgcttcat----t-a-T------------T--------AAGtt
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570038 24 +   9816681 atgtcaccgcttcaT----T-A-T------------T--------AAGTT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               72622 24 -     81375 atgttgccgcttcaT----T-A-T------------T--------AAATT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              4442 24 +     19060 atgttgccgcttcaT----T-A-T------------T--------AAATT
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 12260  3 -     22811 -----------------------------------------------gct
i Procavia_capensis.ProCapCap_scaffold_85530             I 8 I 56
s Prolemur_simus.MPIZ01000396.1                            2596171 10 -   4620579 --------------T----T-A-T------------T--------AAGTT
i Prolemur_simus.MPIZ01000396.1                          C 0 I 8
s Propithecus_coquerelli.NW_012148875.1                     990141 10 +   2598838 --------------C----T-A-T------------T--------aagtt
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 8
s Propithecus_coronatus.k141_347390                          28451 10 +     38485 --------------C----T-A-T------------T--------AAGTT
i Propithecus_coronatus.k141_347390                      C 0 I 8
s Propithecus_diadema.k141_58108                               496 10 -     13098 --------------C----T-A-T------------T--------AAGTT
i Propithecus_diadema.k141_58108                         C 0 I 8
s Propithecus_edwardsi.k141_1176054                          25972 10 +     35766 --------------C----T-A-T------------T--------AAGTT
i Propithecus_edwardsi.k141_1176054                      C 0 I 8
s Propithecus_perrieri.k141_1200571                           4160 10 -     24134 --------------C----T-A-T------------T--------AAGTT
i Propithecus_perrieri.k141_1200571                      C 0 I 8
s Propithecus_tattersalli.k141_790011                        27982 10 -     67325 --------------C----T-A-T------------T--------AAGTT
i Propithecus_tattersalli.k141_790011                    C 0 I 8
s Propithecus_verreauxi.k141_956661                           4204 10 -      6182 --------------C----T-A-T------------T--------AAGTT
i Propithecus_verreauxi.k141_956661                      C 0 I 8
s Psammomys_obesus.NESX01036370.1                             9768 10 -     21651 --------------C----A-A-G------------T--------AAGtt
i Psammomys_obesus.NESX01036370.1                        I 3 C 0
s Pteronotus_parnellii.KE909381.1                            13999 10 -     21811 --------------C----T-T-T------------t--------acatt
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39533 13 +     42204 --------------CAAT-T-T-T------------T--------AAGTT
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22976082 10 +  28871421 --------------C----T-A-A------------A--------ATGTT
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1359168 10 +   4952924 --------------C----T-A-A------------A--------ATGTT
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20273641 14 -  38429054 --------------CTAT-T-TCT------------T--------AAGtc
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             14449 24 -     91421 atgttgccgcttcaT----T-A-T------------T--------AAATT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7608572 24 +   7812017 atgttgccgcttcaT----T-A-T------------T--------AAATT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             14420 24 -     72585 atgttgccgcttcaT----T-A-T------------T--------AAATT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53570012 10 +  90668790 --------------C----T-A-C------------T--------AAGtt
i Rattus_norvegicus.chr16                                I 3 C 0
s Rhinopithecus_bieti.k119_217274                             6137 24 -     11128 atgttgctgcttcaT----T-A-T------------T--------AAATT
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91235493 24 - 195417433 atgttgccgcttcat----t-a-t------------T--------AAATT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7671142 24 +   7961872 atgttgctgcttcaT----T-A-T------------T--------AAATT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87100 10 -     96226 --------------C----T-A-A------------A--------ATGTT
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               7508 22 -      8359 --gacACCAGTTCAC----T-A-T------------T--------AAGTT
i Saguinus_bicolor.k141_2619299                          I 68 C 0
s Saguinus_imperator.k141_2524406                             1461 22 +      2197 --gacgCCAGTTCAC----T-A-T------------T--------AAGTT
i Saguinus_imperator.k141_2524406                        I 68 C 0
s Saguinus_inustus.k141_699149                               12884 22 +     13640 --gacgCCAGTTCAC----T-A-T------------T--------AAGTT
i Saguinus_inustus.k141_699149                           I 68 C 0
s Saguinus_labiatus.k141_285685                               7748 22 +      8564 --gacgCCAGTTCAC----T-A-T------------T--------AAGTT
i Saguinus_labiatus.k141_285685                          I 68 C 0
s Saguinus_midas.LG03                                    209468583 22 + 209938924 --gacACCAGTTCAC----T-A-T------------T--------AAGTT
i Saguinus_midas.LG03                                    I 68 C 0
s Saguinus_mystax.k141_374627                                 7310 22 -      9399 --gacgCCAGTTCAC----T-A-T------------T--------AAGTT
i Saguinus_mystax.k141_374627                            I 68 C 0
s Saimiri_boliviensis.NW_024100920.1                     119950236 24 - 121099817 ATGACGTCACTTCAT----T-A-T------------T--------AAGGt
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       22692 24 +     46362 atgacgtcacttcaT----T-A-T------------T--------AAGTT
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               22787 24 +     45824 atgacgtcacttcaT----T-A-T------------T--------AAGTT
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             39415 24 -     64574 ATGACGTCACTTCAT----T-A-T------------T--------AAGTT
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               2421 24 -     23631 atgacgtcacttcaT----T-A-T------------T--------AAGGT
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 22683 24 -     61129 atgacgtcacttcaT----T-A-T------------T--------AAGTT
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420010 24 -   5703754 atgacgccacttcaT----T-A-T------------T--------AAGTT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          55051 24 -     80660 atgacgccacttcaT----T-A-T------------T--------AAGTT
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Semnopithecus_entellus.k141_11662                          18961 24 -     19888 atgttgccgcttcaT----T-A-T------------T--------AAATT
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26164 24 +     39453 atgttgccgcttcaT----T-A-G------------T--------AAATT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            6683 24 +     27826 atgttgccgcttcaT----T-A-T------------T--------AAATT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             6204 24 -     19483 atgttgccgcttcaT----T-A-T------------T--------AAATT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      6272 24 +      7198 atgttgccgcttcaT----T-A-T------------T--------AAATT
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         14530 24 +     15514 atgttgccgcttcaT----T-A-T------------T--------AAATT
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               3065 17 +   1910179 --------------C----T-A-C------------TAT-TATTTAAGTT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 1
s Sorex_araneus.JH798187.1                                13649961 16 -  18376816 -------------------A-A-T------------TATGT-TGTAAGAT
i Sorex_araneus.JH798187.1                               C 0 I 1
s Spermophilus_dauricus.KZ294078.1                         1952535 10 -   3870691 --------------C----T-A-T------------T--------aagtc
i Spermophilus_dauricus.KZ294078.1                       I 34 I 1
s Spilogale_gracilis.SpiGra_flattened_line_13525             30035 13 +     97271 --------------CAAT-T-T-T------------T--------AAGTT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              17619 13 -    196729 --------------CTA--T-TCT------------T--------AAGTC
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 3
s Sus_scrofa.CM000828.4                                    6809803  8 +  69701581 ---------------------A-T------------T--------AAGtt
i Sus_scrofa.CM000828.4                                  C 0 I 7
s Symphalangus_syndactylus.tarseq_199                      1092745 24 -   1523678 gtgtcaccgcttcaT----T-A-T------------T--------AAGTT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 9911 10 +     41958 --------------C----T-A-T------------T--------AAGTT
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 71444  4 +    116680 --------------T----T-A-C--------------------------
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 I 10
s Tapirus_indicus.TapInd_scaffold_9301                      118069 10 -    156842 --------------C----T-A-T------------T--------AAGTT
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    386522 10 +    539355 --------------C----T-A-T------------T--------AAGTT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               25744 10 +     70052 --------------C----T-A-T------------T--------AAATT
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                 579 10 -     16117 --------------C----T-A-T------------T--------AAATT
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186427852 24 + 186847797 ATGTTGTCGCTTCAT----T-A-T------------T--------AAATT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     80241 10 +    610378 --------------C----A-T-T------------T--------AAGTT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         10255 24 -     20410 atgttgccgcttcaT----T-A-T------------T--------AAATT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    14449 24 +     15221 atgttgccgcttcaT----T-A-T------------T--------AAATT
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                       10356 24 +     19930 atgttgccgcttcaT----T-A-T------------T--------AAATT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       6783 24 -     19997 gtgttgccgcttcaT----T-A-T------------T--------AAATT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            46907 24 -     60166 atgttgccgcttcaT----T-A-T------------T--------AAATT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        14378 24 -     27529 atgttgccgcttcaT----T-A-T------------T--------AAATT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     14322 24 -     18194 atgttgccgcttcaT----T-A-T------------T--------AAATT
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           8050 24 -     21137 atgttgccgcttcaT----T-A-T------------T--------AAATT
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    6753 24 -     10723 atgttgccgcttcaT----T-A-T------------T--------AAATT
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         5909 24 +      9834 atgttgccgcttcaT----T-A-T------------T--------AAATT
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        24222 24 +     32220 atgttgccgcttcaT----T-A-T------------T--------AAATT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5938324 24 +   6242583 atgttgccgcttcaT----T-A-T------------T--------AAATT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        7576 24 +     20839 atgttgccgcttcaT----T-A-T------------T--------AAATT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2154992 10 +   4065304 --------------T----T-A-C------------T--------AAGTC
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     8640 10 -     10553 --------------T----T-A-C------------T--------AAGTC
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4849738 13 -   5085361 --------------c-aatt-t-t------------t--------aaatt
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  10826 10 +     50397 --------------C----T-A-T------------T--------AGGCT
i Varecia_rubra.k141_590885                              C 0 I 8
s Varecia_variegata.k141_1128296                             10881 10 +     24756 --------------C----T-A-T------------T--------AGGTT
i Varecia_variegata.k141_1128296                         C 0 I 8
s Vicugna_pacos.KN270157.1                                 5371183 10 -   5488506 --------------C----T-A-T------------t--------aagtc
i Vicugna_pacos.KN270157.1                               C 0 I 9
s Vulpes_lagopus.VulLag_flattened_line_30954                 10099 13 -     43706 --------------CTAT-T-T-T------------T--------AAGTT
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 9
s Xerus_inauris.XerIna_scaffold_48378                        23737 10 -     24430 --------------C----T-A-T------------T--------AAATT
i Xerus_inauris.XerIna_scaffold_48378                    I 30 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          4470 13 +     86975 --------------CAAT-T-T-T------------T--------AAATT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      14317 10 +     63895 --------------C----T-A-T------------T--------AAATT
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 3 C 0
e Echinops_telfairi.JH980293.1                            48779651 164 + 111700974 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   52652  8 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   3761  0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Sigmodon_hispidus.SigHis_scaffold_60841                    11304  0 -     12148 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    152480  8 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    20915  0 -    145209 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50341  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352  0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            62473  5 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Condylura_cristata.JH655891.1                           17547413  8 -  53390261 I
e Colobus_guereza.LG01                                   199948958  0 + 200372422 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_713168             206  0 -      2554 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    136758  0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6066 29 +     62944 G---G--A--A-----------A---A-A-T-G-----------------------------TAA-AACTT-AAACATTG-----TCC--------C
s Acinonyx_jubatus.LLWD01001279.1                           826648 25 -   1699592 a---g--a--a-----------a---a-t-a-t-----------------------------tt------g-aaatatca-----cTC-C------A
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_11939                     24708 24 -     89785 A---G--A--A-----------A---A-G-T-T-----------------------------TAAACATAAAC------A------GG--------C
i Acomys_cahirinus.AcoCah_scaffold_11939                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9509891 30 -  29979442 g---g--a--a-----------a---a-t-a-t-----------------------------tta-aacta-aaacatAG-----CCC-C------A
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             78662 30 -    347723 G---G--A--A-----------A---A-C-A-T-----------------------------TTA-AGTTA-AGACATTG-----CTC-C------A
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     74047  7 -     89534 A---G--A--A-----------A---A-A--------------------------------------------------------------------
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 10
s Allenopithecus_nigroviridis.k141_3361533                   13983 29 -     52922 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         13925 29 -     28001 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          4421 29 -     18505 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           5274 29 -     12518 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                              2730 21 -     27731 ------------------------------T-G-----------------------------TAA-AACTT-GAGCATTG-----TTT---------
i Alouatta_belzebul.k141_3238538                         I 7 C 0
s Alouatta_caraya.k141_1743867                                2860 21 +      3134 ------------------------------T-G-----------------------------TAA-AACTT-GAGCATTG-----TTT---------
i Alouatta_caraya.k141_1743867                           I 7 C 0
s Alouatta_discolor.k141_743489                               2990 21 -     45847 ------------------------------T-G-----------------------------TAA-AACTT-GAGCATTG-----TTT---------
i Alouatta_discolor.k141_743489                          I 7 C 0
s Alouatta_juara.k141_1509701                                24197 21 +     25266 ------------------------------T-G-----------------------------TAA-AACTT-GAGCATTG-----TTT---------
i Alouatta_juara.k141_1509701                            I 7 C 0
s Alouatta_nigerrima.k141_3472759                            17495 21 -     18578 ------------------------------T-G-----------------------------TAA-AACTT-GAGCATTG-----TTT---------
i Alouatta_nigerrima.k141_3472759                        I 7 C 0
s Alouatta_palliata.k141_2135620                              2884 21 +     47717 ------------------------------T-G-----------------------------TAA-AACTT-GAGCATTG-----TTT---------
i Alouatta_palliata.k141_2135620                         I 7 C 0
s Alouatta_puruensis.k141_1253230                             2994 21 -      3544 ------------------------------T-G-----------------------------TAA-AACTT-GAGCATTG-----TTT---------
i Alouatta_puruensis.k141_1253230                        I 7 C 0
s Alouatta_seniculus.k141_117119                             14217 21 +     50774 ------------------------------T-G-----------------------------TAA-AACTT-GAGCATTG-----TTT---------
i Alouatta_seniculus.k141_117119                         I 7 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184389 30 +    412891 G---G--A--A-----------A---A-T-A-T-----------------------------TTA-AACTA-AAACATTG-----TCC-C------A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  14846 21 -     33861 ------------------------------C-G-----------------------------TAA-AACTT-GAACATTG-----TTT---------
i Aotus_azarae.k141_3104676                              I 5 C 0
s Aotus_griseimembra.k141_2240599                            14866 21 -     34016 ------------------------------T-G-----------------------------TAA-AACTT-GAACATTG-----TTT---------
i Aotus_griseimembra.k141_2240599                        I 5 C 0
s Aotus_nancymaae.KZ198451.1                               4297263 21 -   5030052 ------------------------------C-G-----------------------------TAA-AACTT-GAACATTG-----TTT---------
i Aotus_nancymaae.KZ198451.1                             I 5 C 0
s Aotus_trivirgatus.k141_2152450                             14868 21 -     34685 ------------------------------C-G-----------------------------TAA-AACTT-GAACATTG-----TTT---------
i Aotus_trivirgatus.k141_2152450                         I 5 C 0
s Aotus_vociferans.k141_344750                               27992 21 -     47192 ------------------------------C-G-----------------------------TAA-AACTT-GAACATTG-----TTT---------
i Aotus_vociferans.k141_344750                           I 5 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      11227 28 +     20879 T---A--A--A-----------A---A-A-A-T-----------------------------T-AAAACTT-A------AACATTGCC--------C
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       10730 20 +     14667 --------------------------------------------------------------TAC-AACAG-ATGTATTG-----TCC--------A
i Arctocebus_calabarensis.k141_2318572                   I 8 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3801 30 +     43469 G---G--A--A-----------A---A-C-A-T-----------------------------TTA-AACCA-AAATATTG-----TCC-C------A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  53118 20 -     92717 --------------------------------------------------------------TGA-GACTG-ACATGTTT-----TTC--------T
i Avahi_laniger.k141_765380                              I 8 C 0
s Avahi_peyrierasi.k141_1424874                              53747 20 +     85213 --------------------------------------------------------------TGA-GACTG-ACATGTTT-----TCC--------T
i Avahi_peyrierasi.k141_1424874                          I 8 C 0
s Callibella_humilis.k141_1278103                             4593 28 -     10423 G---G--A--A-----------A---A-A-T-G-----------------------------TAG-AACTT-GAACATCA-----TTT---------
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             24068 28 +     31915 G---G--A--A-----------A---A-A-T-G-----------------------------TAA-AACTT-GAACATCG-----TTC---------
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            4559 28 +      5267 G---G--A--A-----------A---A-A-T-G-----------------------------TAG-AACTT-GAACATCG-----TAT---------
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23589773 28 - 189096842 G---G--A--A-----------A---A-A-T-G-----------------------------TAG-AACTT-GAACATCG-----TAT---------
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             11303 28 -     12001 G---G--A--A-----------A---A-A-T-G-----------------------------TAG-AACTT-GAACATCG-----TTT---------
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10001707 29 -  17673402 a---g--a--a-----------a---a-t-a-t-----------------------------tta-aacta-aaacacTG-----CCC--------A
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334165 29 -   7040546 a---g--a--a-----------a---a-t-a-t-----------------------------tta-aacta-aaacaCTG-----CCC--------A
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  402448 29 -   1652518 a---g--a--a-----------a---a-t-a-t-----------------------------tta-aacta-aaacacTG-----CCC--------A
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17798506 16 -  60362399 --------------------------------------------------------------------TTA-AAATATTG-----CTC-C------A
i CanFam4.chr16                                          I 9 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184563 16 -    185531 --------------------------------------------------------------------TTA-AAATATTG-----CTC-C------A
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 9 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9033949 16 -   9314153 --------------------------------------------------------------------tta-aaatattg-----ctc-------cA
i Canis_lupus_dingo.QKWQ01000480.1                       I 9 C 0
s Canis_lupus_familiaris.chr16                            17958214 16 -  59632846 --------------------------------------------------------------------tta-aaatattg-----ctc-------cA
i Canis_lupus_familiaris.chr16                           I 9 C 0
s Canis_lupus_orion.HG994398.1                            18499726 16 +  63665305 --------------------------------------------------------------------tta-aaatattg-----ctc-------cA
i Canis_lupus_orion.HG994398.1                           I 9 C 0
s Carlito_syrichta.NW_007259797.1                           155248 29 -    496798 G---G--A--T-----------A---C-T-C-T-----------------------------CAC-AACTT-AAACAGcg-----tct--------g
i Carlito_syrichta.NW_007259797.1                        I 191 I 758
s Carollia_perspicillata.CarPer_scaffold_92756                4164 30 -     11696 G---G--C--A-----------A---A-T-A-T-----------------------------TTA-AACTA-AAACATCA-----TCC-C------A
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     92332 19 +    217609 ----------------------------------------------------------------A-AACTA-AAACGTTG-----CTC-C------A
i Catagonus_wagneri.CatWag_scaffold_2839                 I 7 C 0
s Cebuella_niveiventris.k141_1251222                          9218 28 -     11392 G---G--A--A-----------A---A-A-T-G-----------------------------TAG-AACTT-GAACATCA-----TTT---------
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               5316 28 -      7577 G---G--A--A-----------A---A-A-T-G-----------------------------TAG-AACTT-GAACATCA-----TTT---------
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25651369 28 +  26074798 G---G--A--A-----------A---A-A-T-G-----------------------------TAA-AACGT-GAACATTG-----TTT---------
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_398305                                  946 28 +      1777 G---G--A--A-----------A---A-A-T-G-----------------------------TAA-AACGT-GAACATTG-----TTT---------
i Cebus_olivaceus.k141_398305                            C 0 C 0
s Cebus_unicolor.k141_544048                                 49278 28 -     74725 G---G--A--A-----------A---A-A-T-G-----------------------------TAA-AACGT-GAACATTG-----TTT---------
i Cebus_unicolor.k141_544048                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         4761 29 +     31688 G---G--A--T-----------A---C-T-C-T-----------------------------TAC-AACTT-AAACAGTG-----TCT--------G
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12230755 29 +  27778364 g---g--a--a-----------a---a-t-a-t-----------------------------tta-aacta-aaacatTG-----CC--C------A
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1782 29 -     25243 G---G--A--A-----------A---A-T-A-T-----------------------------TTA-AACTA-AAACATTG-----CC--C------A
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4474936 29 +   4669795 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----tcc--------c
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        13481 29 -     19203 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           7907 29 +      8260 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           8133 29 +     27781 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         8293 29 -     20310 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          11272 29 +     29689 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            5701 29 +      9989 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          13951 29 -     27936 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            2817 29 -     17152 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38816351 29 +  39242232 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222046 29 -  21565898 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       39164 29 -     53127 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATCG-----TCC--------C
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        6432 29 +      7159 G---G--G--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCT--------C
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       13967 29 -     27947 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         13940 29 +     17596 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          3174 29 +     26000 G---G--A--G-----------A---A-A-A-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             20505 19 -     52598 --------------------------------------------------------------TAA-GACTG-ACATATTT-----TCC---------
i Cheirogaleus_major.k141_333249                         I 8 I 10
s Cheirogaleus_medius.k141_1055463                           15872 19 +     57038 --------------------------------------------------------------TAA-GACTG-ACATATTT-----TCC---------
i Cheirogaleus_medius.k141_1055463                       I 8 I 8
s Chiropotes_albinasus.k141_2813271                          10474 21 +     11226 ------------------------------T-G-----------------------------TAA-AACTT-GAACATCG-----TCT---------
i Chiropotes_albinasus.k141_2813271                      I 7 I 5
s Chlorocebus_aethiops.ctg25                              18427925 29 -  18827391 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----CCC--------C
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       14362 29 -     50209 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----CCC--------C
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135421362 29 + 135778131 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----ccc--------c
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 17185 24 +     19366 --------------------------A-A-T-A-----------------------------GTA-AATCC-AAGCATTG-----CCC--------C
i Choloepus_didactylus.ChoDid_scaffold_45914             I 12 C 0
s Choloepus_hoffmanni.KN194906.1                            172285 24 +    839153 --------------------------a-a-t-a-----------------------------gta-aatcc-AAGCATTG-----CCC--------C
i Choloepus_hoffmanni.KN194906.1                         I 12 C 0
s Colobus_angolensis.KN981557.1                            1909878 29 +   2368649 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_polykomos.k141_906115                              36416 29 +     84244 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17547421 19 -  53390261 --------------------------------------------------------------TAC-TACTA--AATGTTG-----CCA--------C
i Condylura_cristata.JH655891.1                          I 8 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          13626 30 -     20389 G---G--T--A-----------A---A-T-A-T-----------------------------TTC-AACTA-AAATATTG-----CCC-C------A
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 49467 25 +     63868 A---G--G--C-----------A---A-A-T-T-----------------------------TAAACATAA-A------CA----TTG--------C
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11666945 25 + 224834208 A---G--A--A-----------A---G-C-T-T-----------------------------CAAACATAA-A------CA----TTG--------A
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               1931 43 -     19598 ----------------------A---A-T-A-TCTGTATATA-T-TA-T-------AG-CAATTA-TACTA-AAATATTA-----CCT--------A
i Crocidura_indochinensis.CroInd_scaffold_37019          I 1 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27797 30 -     87169 A---G--A--A-----------A---A-T-A-T-----------------------------TTA-GACTG-AAATATTG-----GTC-C------A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    836520 24 +   1526836 G---G--A--A-----------A---A-A-C-T-----------------------------GGAATACTT-A------C-----TCC--------C
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12536735 20 -  12879189 --------------------------------------------------------------TAA-GACTG-ACATATTG-----TCC--------A
i Daubentonia_madagascariensis.ctg71                     I 8 C 0
s Desmodus_rotundus.KZ672289.1                             8629180 29 +  20541912 g---g--a--a-----------a---a-t-a-t-----------------------------tta-aacta-aa-cATTG-----TCC-C------A
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672605 30 +   1390856 g---g--a--a-----------a---a-t-a-t-----------------------------tta-aacta-aaacaTTG-----CCC-C------A
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    5358 29 +    198055 G---G--A--A-----------A---A-T-A-T-----------------------------TTA-AACTA-AAACATTG-----CC--C------A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE759718.1                                   9836 30 +     11740 a---g--a--a-----------a---a-c-a-t-----------------------------tta-aacta-aaatattg-----cTC-C------A
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1097061 24 +  10337057 --------------------------A-T-A-T-----------------------------TTA-AATCA-AGACATCT-----CCT--------C
i Elephantulus_edwardii.JH947257.1                       I 6404 C 0
s Ellobius_lutescens.LOEQ01008920.1                          90438 25 +    110024 A---G--A--A-----------A---A-C-T-T-----------------------------TAAACATAA-A------CA----TTG--------C
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01109367.1                             620 25 +      6299 G---G--A--A-----------G---A-C-T-T-----------------------------TAAACATAA-A------CA----TTG--------C
i Ellobius_talpinus.LOJH01109367.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16328629 30 -  41312741 g---g--a--a-----------a---a-t-a-t-----------------------------tta-aatta-aaacattg-----ttC-C------A
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144760 30 -  14770903 g---g--a--a-----------a---a-t-a-t-----------------------------tta-aacta-aACCACTG-----CCC-C------A
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1282668 30 +   4378816 g---g--a--a-----------a---a-t-a-t-----------------------------tta-aacta-aaacatTG-----CCC-C------A
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18530489 30 -  39960074 g---g--a--a-----------a---a-t-a-t-----------------------------tta-aacta-aaacatTG-----CCC-C------A
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               32504 30 +    498745 g---g--a--a-----------a---a-t-a-t-----------------------------tta-aacta-aaacattG-----CCC-C------A
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21204532 29 -  21539334 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13223 19 -     14127 --------------------------------------------------------------TAA-CACTG-ACATATTT-----TC---------C
i Eulemur_albifrons.k141_342033                          I 8 I 11
s Eulemur_collaris.k141_377015                                5922 19 -     16928 --------------------------------------------------------------TAA-CACTG-ACATATTT-----TC---------C
i Eulemur_collaris.k141_377015                           I 8 I 13
s Eulemur_coronatus.k141_885031                              14950 19 -     25546 --------------------------------------------------------------TAA-CACTG-ACATATTT-----TC---------C
i Eulemur_coronatus.k141_885031                          I 8 I 10
s Eulemur_flavifrons.k141_1184614                            12150 19 +     26330 --------------------------------------------------------------TAA-CACTG-ACATATTT-----TC---------T
i Eulemur_flavifrons.k141_1184614                        I 8 I 16
s Eulemur_fulvus.k141_544389                                 13389 19 +     23973 --------------------------------------------------------------TAA-CACTG-ACATATTT-----TC---------C
i Eulemur_fulvus.k141_544389                             I 8 I 10
s Eulemur_macaco.k141_1562045                                12150 19 +     75513 --------------------------------------------------------------TAA-CACTG-ACATATTT-----TC---------T
i Eulemur_macaco.k141_1562045                            I 8 I 16
s Eulemur_mongoz.k141_232305                                 10086 19 +     97555 --------------------------------------------------------------TAA-CACTG-ACATATTT-----TC---------C
i Eulemur_mongoz.k141_232305                             I 8 I 10
s Eulemur_rubriventer.k141_571033                            13006 28 +     26496 --------------------------------------------------------------TAA-CACTG-ACATATTT-----TCCTCTTTTTTT
i Eulemur_rubriventer.k141_571033                        I 8 I 10
s Eulemur_rufus.k141_1476633                                  3624 19 -     17153 --------------------------------------------------------------TAA-CACTG-ACATATTT-----TC---------C
i Eulemur_rufus.k141_1476633                             I 8 I 11
s Eulemur_sanfordi.k141_1122526                              13199 19 +    111500 --------------------------------------------------------------TAA-CACTG-ACATATTT-----TC---------C
i Eulemur_sanfordi.k141_1122526                          I 8 I 10
s Felis_catus.CM001381.2                                  20236299 25 + 206538554 g---g--a--a-----------a---a-t-a-t-----------------------------tt------g-aaatatca-----cTC-C------A
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195142 25 + 205367284 g---g--a--a-----------a---a-t-a-t-----------------------------tt------g-aaatatca-----cTC-C------A
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  8656 25 -     36744 G---G--A--A-----------A---A-T-A-T-----------------------------TT------G-AAATATCA-----CTC-C------A
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     425678 20 -    453645 --------------------------------------------------------------TAA-GACAG-GTATATTG-----TCC--------A
i Galago_moholi.ctg2040                                  I 8 C 0
s Galago_senegalensis.k141_631886                             3385 20 +     11339 --------------------------------------------------------------TAA-GACAG-GTATATTG-----TCC--------A
i Galago_senegalensis.k141_631886                        I 8 C 0
s Galagoides_demidoff.k141_1711393                             688 20 +     41679 --------------------------------------------------------------TAA-GACAG-GTATATTG-----TCC--------A
i Galagoides_demidoff.k141_1711393                       I 8 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840                497 29 -      9135 G---G--A--A-----------A---A-G-T-T-----------------------------TAA-AACTT-AAACATTA-----CAC--------C
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              15321 29 -     32273 G---G--A--A-----------A---A-A-T-G-----------------------------TAA-AACTT-AAACATTG-----TCC--------C
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186337467 29 + 186649187 g---g--a--a-----------a---a-a-t-g-----------------------------taa-aactt-aaacattg-----tcc--------c
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6279 15 -     19426 --------------------------------------------------------------TAA-CACTG-ACATATT------------------
i Hapalemur_alaotrensis.k141_170648                      I 8 I 5
s Hapalemur_gilberti.k141_488810                             11428 15 -     15286 --------------------------------------------------------------TAA-CACTG-ACATATT------------------
i Hapalemur_gilberti.k141_488810                         I 8 I 5
s Hapalemur_griseus.k141_1511508                             13067 15 +     18253 --------------------------------------------------------------TAA-CACTG-ACATATT------------------
i Hapalemur_griseus.k141_1511508                         I 8 I 5
s Hapalemur_meridionalis.k141_248335                         13168 15 -     41752 --------------------------------------------------------------TAA-CACTG-ACATATT------------------
i Hapalemur_meridionalis.k141_248335                     I 8 I 5
s Hapalemur_occidentalis.k141_907772                         13006 15 -     16460 --------------------------------------------------------------TAA-CACTG-ACATATT------------------
i Hapalemur_occidentalis.k141_907772                     I 8 I 5
s Helogale_parvula.HelPar_flattened_line_2585               241631 30 +    327341 A---G--A--A-----------A---A-T-G-T-----------------------------TTA-AACTG-AAATATTG-----GTC-C------A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_384612                 625 24 -       958 --------------------------A-G-T-T-----------------------------CAA-AATTG-AAATACTG-----AGC--------C
i Heterohyrax_brucei.HetBruBak_scaffold_384612           I 328 n 80
s Hoolock_leuconedys.ctg274                                    434134 29 +    630532 G---G--A--A-----------A---A-A-T-G-----------------------------TAA-AACTT-AAACATTG-----TCC--------C
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  43792 30 +     55795 A---G--A--A-----------A---A-T-A-T-----------------------------TTA-AACTG-AAATATTG-----GTC-C------A
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_232023                                1900 29 -     12752 G---G--A--A-----------A---A-A-T-G-----------------------------TAA-AACTT-AAACATTG-----TCC--------C
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                               1944 29 +     14092 G---G--A--A-----------A---A-A-T-G-----------------------------TAA-AACTT-AAACATTG-----TCC--------C
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189542727 29 - 191637585 G---G--A--A-----------A---A-A-T-G-----------------------------TAA-AACTT-AAACATTG-----TCC--------C
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3335622 29 -  11177569 G---G--A--A-----------A---A-A-T-G-----------------------------TAA-AACTT-AAACATTG-----TCC--------C
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7519358 20 -   7955117 --------------------------------t-----------------------------t-aaaacct-a------aacattgcc--------c
i Ictidomys_tridecemlineatus.JH393364.1                  I 7 I 1
s Indri_indri.k141_3655594                                   21963 10 +     31101 --------------------------------------------------------------TAA-GACTG-AC-----------------------
i Indri_indri.k141_3655594                               I 8 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    13169 30 -     42476 G---G--A--A-----------A---A-T-A-T-----------------------------TTA-AACTA-AACCGCTG-----CCC-C------A
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15523511 15 -  30322482 --------------------------------------------------------------TAA-CACTG-ACATATT------------------
i Lemur_catta.scaffold_24                                I 8 I 5
s Leontocebus_fuscicollis.k141_1820339                        6848 28 +     64341 G---G--A--A-----------A---A-A-T-G-----------------------------TAA-AACTT-GAACATCG-----TTT---------
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           4175 28 +      4941 A---G--A--A-----------A---A-A-T-G-----------------------------TAA-AACTT-GAACATCG-----TTT---------
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        6891 28 +     35603 G---G--A--A-----------A---A-A-T-G-----------------------------TAA-AACTT-GAACATCG-----TTT---------
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    28368 28 +     38576 G---G--A--A-----------A---A-A-T-G-----------------------------TAA-AACTT-GAACATCG-----TTT---------
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         25065 28 +     66356 G---G--A--A-----------A---A-A-T-G-----------------------------TAA-AACTT-GAACATCG-----TTT---------
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         10394 20 -     23766 --------------------------------------------------------------TAA-GACTG-ACATATTT-----TCC--------T
i Lepilemur_ankaranensis.k141_596936                     I 7 C 0
s Lepilemur_dorsalis.k141_577674                             28460 20 +     45836 --------------------------------------------------------------TAA-GACTG-ACATATTT-----TCC--------T
i Lepilemur_dorsalis.k141_577674                         I 7 C 0
s Lepilemur_ruficaudatus.k141_121139                          1006 20 +     25010 --------------------------------------------------------------TAA-GACTG-ACATATTT-----TCC--------T
i Lepilemur_ruficaudatus.k141_121139                     I 8 C 0
s Lepilemur_septentrionalis.k141_185316                      26396 20 +     54090 --------------------------------------------------------------TAA-GACTG-ACATATTT-----TCC--------T
i Lepilemur_septentrionalis.k141_185316                  I 7 C 0
s Leptonychotes_weddellii.KB714746.1                       3042168 30 +   3914936 g---g--a--a-----------a---a-t-a-t-----------------------------tta-aacta-aaacaTTG-----CTC-C------A
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     5569 29 -     14121 A---G--A--A-----------A---A-G-T-T-----------------------------TGA-AACTT-CAACACTG-----CCC--------A
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1436483 29 +   1826925 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5064 20 +     11245 --------------------------------------------------------------TAA-GACAG-ATTTATTG-----TCC--------A
i Loris_lydekkerianus.k141_2539221                       I 8 C 0
s Loris_tardigradus.ctg83                                  1003914 20 +   6120653 --------------------------------------------------------------TAA-GACAG-ATTTATTG-----TCC--------A
i Loris_tardigradus.ctg83                                I 8 C 0
s Loxodonta_africana.GL010049.1                            4216480 20 -  43346337 --------------------------------------------------------------taa-aatca-aaatgttg-----tcc--------c
i Loxodonta_africana.GL010049.1                          I 57 C 0
s Lycaon_pictus.CM007581.1                                17954454 16 -  59628241 --------------------------------------------------------------------tta-aaatattg-----ctc-------cA
i Lycaon_pictus.CM007581.1                               I 9 C 0
s Macaca_arctoides.k141_2326796                               6291 29 +     40492 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59675552 29 +  60120075 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 12064 29 -     26193 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            79847 29 -    114318 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  5538 29 -     23192 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                15009 29 -     29190 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  23574 29 +     37952 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTG-AAGCATTG-----TCC--------C
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186838662 29 + 187317192 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----tcc--------c
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25457226 29 -  25927173 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----tcc--------c
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  79425 29 +     89720 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 6423 29 +     20474 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   6223 29 -     14993 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  329089 29 -    668171 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 4538 29 -     24072 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               25162 29 -     45290 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 89921 30 +     94391 C---G--A--A-----------A---A-T-A-T-----------------------------TTA-AACTA-AAATATTG-----CTC-C------A
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23936758 28 -  24302211 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AA-TT-AAGCATTG-----TCC--------C
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               350886 29 +    752769 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33101659 29 -  40650429 a---a--a--a-----------a---aaa-t-t-----------------------------t-aaaacct-a------aacattgcc--------c
i Marmota_marmota.CZRN01000018.1                         C 0 I 1
s Megaderma_lyra.MegLyr_scaffold_4542                         9642 30 -    207569 G---G--G--A-----------A---A-T-A-T-----------------------------TTA-AACTA-AAATATTG-----CCC-C------A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              9346 30 +     13704 G---G--A--A-----------A---A-T-A-T-----------------------------TTA-AATTA-AAACACTG-----TTC-C------A
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 32144 26 +    140813 A---G--A--A-----------A---A-T-T-T-----------------------------TAAACATAAAC------AA----TTG--------C
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12181627 25 -  29670104 A---G--A--A-----------A---G-C-T-T-----------------------------TAAACATAA-A------CA----TTG--------A
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                5133 28 -      7380 G---G--A--A-----------A---A-A-T-G-----------------------------TAG-AACTT-GAACATCA-----TTT---------
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               4206 28 +     18990 G---G--A--A-----------A---A-A-T-G-----------------------------TAG-AACTT-GAACATCA-----TTT---------
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      5145 28 -      7356 G---G--A--A-----------A---A-A-T-G-----------------------------TAG-AACTT-GAACATCA-----TTT---------
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    20915 11 -    145209 -------------------------------------------------------------------------gatatta-----ttc--------t
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Microcebus_murinus.CM007674.1                           18290903 19 -  93316391 g---a--a--aaaattttaaaaa---a-a-t------------------------------------------------------------------
i Microcebus_murinus.CM007674.1                          C 0 I 14
s Micronycteris_hirsuta.MicHir_scaffold_52381                14721 30 -     19307 G---G--A--A-----------A---A-T-A-T-----------------------------TTA-TACTA-AAACACTG-----TCC-C------A
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849952 30 +   8254450 g---g--a--a-----------a---a-t-a-t-----------------------------tta-aacta-aaacaTTG-----CCC-C------A
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             33629 30 +     64694 G---G--A--A-----------A---A-T-A-T-----------------------------TTA-AACTA-AAACATTG-----CCC-C------A
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           8477 29 -     28506 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         5036 30 -      8324 G---G--A--A-----------A---A-T-A-T-----------------------------TTA-AACTA-AAACATTG-----CTC-C------A
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      8449 22 -     37649 G---A--A--AAAATTAAAAAAAAACA-A-T------------------------------------------------------------------
i Mirza_zaza.k141_952172                                 C 0 I 14
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140667 30 -    366855 G---G--A--A-----------A---A-T-A-T-----------------------------TTA-AACTA-AAACATTG-----CCC-C------A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   34745 30 +     37127 A---G--A--A-----------A---A-T-G-T-----------------------------TTA-AACTG-AAATATTG-----GTCT-------A
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5824 30 +     14753 G---G--A--A-----------A---A-T-A-T-----------------------------TTA-AACGA-AACCACTG-----CCC-C------A
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84360748 25 - 120012414 A---G--A--A-----------A---G-T-T-T-----------------------------TAAACATAA-C------CA----TTG--------C
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87649748 25 - 129401213 A---G--A--A-----------A---G-T-T-T-----------------------------TAAACATAA-C------CA----TTG--------C
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31354404 25 -  89631738 A---G--A--A-----------A---G-T-T-T-----------------------------TAAACATAA-C------CA----TTG--------C
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90751809 24 - 130317789 a---g--a--a-----------a---g-t-t-t-----------------------------taaa-atga-c------CA----TTG--------t
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               300524 30 -  14710649 g---g--a--a-----------a---a-t-a-t-----------------------------tta-aatta-agacATTG-----TTC-C------A
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                278997 30 -  10118263 g---g--a--a-----------a---a-t-a-t-----------------------------ttc-aaCTA-AACCACTG-----CCC-C------A
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1586690 30 -   6019432 g---g--a--a-----------a---a-t-a-t-----------------------------tta-aacta-aacCACTG-----CCC-C------A
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902762 30 -   4330536 g---g--a--a-----------a---a-t-a-t-----------------------------tta-aacta-aacCACTG-----CCC-C------A
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        33317 30 +     33610 G---G--A--A-----------A---A-T-A-T-----------------------------TTA-AACTA-AACCACTG-----CCC-C------A
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              188103 24 +    196477 --------------------------A-A-T-A-----------------------------TTA-AAACC-AAATATTG-----CCC--------C
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 10 C 0
s Nannospalax_galili.KL204047.1                            2033232 25 -   3037898 A---G--A--A-----------A---A-A-T-T-----------------------------TAAGCATAA-a------c----attg--------c
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               14473 29 +     21681 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306290 30 +  31847680 g---g--a--a-----------a---a-t-a-t-----------------------------tta-aacta-aaacATTG-----CTC-C------A
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9148708 16 -   9404916 --------------------------------------------------------------------tta-aaatattg-----ctc-------cA
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 9 C 0
s Nycticebus_bengalensis.LG01                            102578891 20 - 196305487 --------------------------------------------------------------TAA-GACAG-ATTTATTG-----TCC--------A
i Nycticebus_bengalensis.LG01                            I 8 C 0
s Nycticebus_coucang.k141_771082                               736 20 -      2667 --------------------------------------------------------------TAA-GACAG-ATTTATTG-----TCC--------A
i Nycticebus_coucang.k141_771082                         I 8 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749312 20 + 199412804 --------------------------------------------------------------TAA-CACAG-ATTTATTG-----TCC--------A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 8 C 0
s Ochotona_princeps.JH802162.1                             1362725 29 +   3988456 A---G--A--A-----------A---A-G-T-T-----------------------------TCA-AGCTT-GCACACTG-----CTC--------C
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              505975 30 -   2017862 g---g--a--a-----------a---a-t-a-t-----------------------------tta-aacta-aaacaTTA-----CTC-C------A
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                    3618 25 -     28053 A---G--A--A-----------A---A-C-T-T-----------------------------TAAACATAA-A------C-C---TTG--------C
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    79535 25 +    102263 A---G--A--A-----------A---A-C-T-T-----------------------------TGAGCATAA-A------CA----TTG--------C
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9191 24 -     18566 --------------------------A-T-T-T-----------------------------TCA-AATCA-GCACATCA-----TCC--------C
i Orycteropus_afer.OryAfe_flattened_line_144387          I 62 C 0
s Oryctolagus_cuniculus.CM000791.1                        67146398 29 + 174332312 A---G--A--A-----------A---A-G-T-T-----------------------------TGA-AACTT-CAACACTG-----CCC--------A
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       461676 16 -    559221 --------------------------------------------------------------------tta-aaatattg-----ctc-------cA
i Otocyon_megalotis.JAEUCK010005147.1                    I 9 C 0
s Otolemur_crassicaudatus.k141_222918                         3210 20 +      8798 --------------------------------------------------------------TAA-GACAG-GTATATTG-----TCC--------A
i Otolemur_crassicaudatus.k141_222918                    I 8 C 0
s Otolemur_garnettii.GL873799.1                             695374 20 -   1103335 --------------------------------------------------------------taa-gACAG-GTATATTG-----TCC--------a
i Otolemur_garnettii.GL873799.1                          I 8 C 0
s Pan_paniscus.KQ411613.1                                    43414 29 +     80009 g---g--a--a-----------a---a-a-t-g-----------------------------taa-aactt-aaacattg-----tcc--------c
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189142323 29 + 189151597 g---g--a--a-----------a---a-a-t-g-----------------------------taa-aactt-aaacaTTG-----TCC--------C
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  150501 25 +    230217 G---G--A--A-----------A---A-T-A-T-----------------------------TT------G-AAATATCA-----CTC-C------A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                263707 25 +  18783137 a---g--a--a-----------a---a-t-a-t-----------------------------tt------g-aaatatca-----cTC-C------A
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4720345 25 -   8748460 a---g--a--a-----------a---a-t-a-t-----------------------------tt------g-aaatatca-----cTC-C------A
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183442506 29 + 183742232 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----tcc--------c
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             6204 29 +     20448 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563012 29 +  20919399 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   4948 29 +     41871 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     8233 29 +     27711 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  8311 29 +      9205 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11962 30 -     78924 A---G--A--A-----------A---A-T-A-T-----------------------------TTA-AACTG-ATATATTG-----CTC-C------A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            9359 19 +     13100 --------------------------------------------------------------TAA-GACAG-ATAT-TTG-----TTC--------A
i Perodicticus_ibeanus.k141_855320                       I 8 C 0
s Perodicticus_potto.k141_1092580                             7761 19 +     25941 --------------------------------------------------------------TAA-GACAG-ATAT-TTG-----TTC--------A
i Perodicticus_potto.k141_1092580                        I 8 C 0
s Peromyscus_maniculatus.KI615324.1                       18194154 25 -  18517816 A---G--A--A-----------A---A-C-A-T-----------------------------TAAACATAA-A------CA----TTG--------C
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Piliocolobus_badius.k141_1234363                           42976 29 +     62158 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        37707 29 +     89929 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            39123 29 +     51399 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14295361 29 -  14605196 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1154 30 +     22620 G---G--A--A-----------A---A-T-A-C-----------------------------TTA-AACTA-AACCACTG-----CCC-C------A
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189130454 29 + 189387572 g---g--a--a-----------a---a-a-t-g-----------------------------taa-aactt-aaacattg-----tcc--------c
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570062 29 +   9816681 G---G--A--A-----------A---A-A-T-G-----------------------------TAA-AACTT-AAACATTG-----TCC--------C
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               72646 29 -     81375 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              4466 29 +     19060 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 12319 24 -     22811 --------------------------A-G-T-T-----------------------------CAA-AATTG-AAATGCTG-----AGC--------C
i Procavia_capensis.ProCapCap_scaffold_85530             I 56 C 0
s Prolemur_simus.MPIZ01000396.1                            2596189 15 -   4620579 --------------------------------------------------------------TAA-CACtg-acatatt------------------
i Prolemur_simus.MPIZ01000396.1                          I 8 I 5
s Propithecus_coquerelli.NW_012148875.1                     990159 20 +   2598838 --------------------------------------------------------------taa-gactg-acgtattt-----ttc--------t
i Propithecus_coquerelli.NW_012148875.1                  I 8 C 0
s Propithecus_coronatus.k141_347390                          28469 20 +     38485 --------------------------------------------------------------TAA-GACTG-ACGTATTT-----TTC--------T
i Propithecus_coronatus.k141_347390                      I 8 C 0
s Propithecus_diadema.k141_58108                               514 20 -     13098 --------------------------------------------------------------TAA-GACTG-ACGTATTT-----TTC--------T
i Propithecus_diadema.k141_58108                         I 8 C 0
s Propithecus_edwardsi.k141_1176054                          25990 20 +     35766 --------------------------------------------------------------TAA-GACTG-ACGTATTT-----TTC--------T
i Propithecus_edwardsi.k141_1176054                      I 8 C 0
s Propithecus_perrieri.k141_1200571                           4178 20 -     24134 --------------------------------------------------------------TAA-GACTG-ACGTATTT-----TTC--------T
i Propithecus_perrieri.k141_1200571                      I 8 C 0
s Propithecus_tattersalli.k141_790011                        28000 20 -     67325 --------------------------------------------------------------TAA-GACTG-ACGTATTT-----TTC--------T
i Propithecus_tattersalli.k141_790011                    I 8 C 0
s Propithecus_verreauxi.k141_956661                           4222 20 -      6182 --------------------------------------------------------------TAA-GACTG-ACGTATTT-----TTC--------T
i Propithecus_verreauxi.k141_956661                      I 8 C 0
s Psammomys_obesus.NESX01036370.1                             9778 26 -     21651 a---g--a--a-----------a---a-t-t-t-----------------------------taaacataaac------a----attG--------C
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            14009 30 -     21811 g---g--a--a-----------a---a-t-a-t-----------------------------tta-aacta-aaatatcG-----CCC-C------A
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39546 30 +     42204 G---G--A--A-----------A---A-T-A-T-----------------------------TTA-AATTA-AAACATTG-----TTC-C------A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22976092 30 +  28871421 G---G--A--a-----------c---a-t-a-t-----------------------------tta-aacta-aaatattg-----ctc-------ca
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1359178 30 +   4952924 G---G--a--a-----------c---a-t-a-t-----------------------------tta-aacta-aaatattg-----ctc-------ca
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20273655 25 -  38429054 g---g--a--a-----------a---a-t-a-t-----------------------------tt------g-aaatatca-----cTC-C------A
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             14473 29 -     91421 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AATTT-AAGCATTG-----TCC--------C
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7608596 29 +   7812017 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             14444 29 -     72585 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53570022 25 +  90668790 a---g--a--a-----------a---a-t-t-t-----------------------------taaacataG-T------CA----TTG--------C
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             6161 29 -     11128 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91235517 29 - 195417433 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7671166 29 +   7961872 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87110 30 -     96226 G---G--A--A-----------A---A-T-A-T-----------------------------TTA-AACTA-AAACATTG-----CTC-C------A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               7530 28 -      8359 G---G--A--A-----------A---A-A-T-G-----------------------------TAA-AACTT-GAACATCG-----TCT---------
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_imperator.k141_2524406                             1483 28 +      2197 G---G--A--A-----------A---A-A-T-G-----------------------------TAA-AACTT-GAACATCG-----TTT---------
i Saguinus_imperator.k141_2524406                        C 0 C 0
s Saguinus_inustus.k141_699149                               12906 28 +     13640 G---G--A--A-----------A---A-A-T-G-----------------------------TAA-AACTT-GAACATCG-----TTT---------
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               7770 28 +      8564 G---G--A--A-----------A---A-A-T-G-----------------------------TAA-AACTT-GAACATCG-----TTT---------
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209468605 28 + 209938924 G---G--A--A-----------A---A-A-T-G-----------------------------TAA-AACTT-GAACATCG-----TCT---------
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 7332 28 -      9399 G---G--A--A-----------A---A-A-T-G-----------------------------TAA-AACTT-GAACATCG-----TTT---------
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119950260 28 - 121099817 g---g--a--a-----------a---a-a-t-g-----------------------------taa-aactt-gacCATCg-----ttt---------
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       22716 28 +     46362 G---G--A--A-----------A---A-A-T-G-----------------------------TAA-AACTT-GACCATCG-----TTT---------
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               22811 28 +     45824 G---G--A--A-----------A---A-A-T-G-----------------------------TAA-AACTT-GACCATCG-----TTT---------
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             39439 28 -     64574 G---G--A--A-----------A---A-A-T-G-----------------------------TAA-AACTT-GACCATCG-----TTT---------
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               2445 28 -     23631 G---G--A--A-----------A---A-A-T-G-----------------------------TAA-AACTT-GACCATCG-----TTT---------
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 22707 28 -     61129 G---G--A--A-----------A---A-A-T-G-----------------------------TAA-AACTT-GACCATCG-----TTT---------
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420034 28 -   5703754 G---G--A--A-----------A---A-A-T-G-----------------------------TAA-AACGT-GAACATTG-----TTT---------
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          55075 28 -     80660 G---G--A--A-----------A---A-A-T-G-----------------------------TAA-AACGT-GAACATTG-----TTT---------
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    152488 20 -    313613 --------------------------------------------------------------TAA-TACAA-AAATATTG-----CCA--------C
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 8 C 0
s Semnopithecus_entellus.k141_11662                          18985 29 -     19888 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26188 29 +     39453 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            6707 29 +     27826 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             6228 29 -     19483 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      6296 29 +      7198 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         14554 29 +     15514 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11304 24 -     12148 ----G--A--A-----------A---A-C-T-T-----------------------------TAAATGTAA-A------CA----TTT--------C
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               3083 60 +   1910179 ----T--A--T--------TGCA---A-T-A-CCAAAATAAAGTCTAGTGGGCTCCAGTCTGTAA-GGTCA-AAATATTG-----CCC--------C
i Solenodon_paradoxus.SolPar_flattened_line_126          I 1 C 0
s Sorex_araneus.JH798187.1                                13649978 45 -  18376816 ----------------------A---A-T-A-TCTGTATACA-T-TA-TAG-----AAT-cataa-tacta-aaatattt-----tct--------a
i Sorex_araneus.JH798187.1                               I 1 C 0
s Spermophilus_dauricus.KZ294078.1                         1952546 26 -   3870691 -------a--a-----------a---a-a-t-t-----------------------------t-aaaacct-a------aacattgcc--------c
i Spermophilus_dauricus.KZ294078.1                       I 1 I 1
s Spilogale_gracilis.SpiGra_flattened_line_13525             30048 31 +     97271 G---G--A--A-----------A---A-T-AAT-----------------------------TTA-AGTTA-AAACATTG-----TTC-C------A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              17635 26 -    196729 ----------------------A---A-T-A-T-----------------------------TTA-AACTG-AAATATTG-----GTC-C------A
i Suricata_suricatta.SurSur_flattened_line_6629          I 3 C 0
s Sus_scrofa.CM000828.4                                    6809818 19 +  69701581 ----------------------------------------------------------------a-aacca-aaacattt-----CTCT-------A
i Sus_scrofa.CM000828.4                                  I 7 C 0
s Symphalangus_syndactylus.tarseq_199                      1092769 29 -   1523678 G---G--A--A-----------A---A-A-T-G-----------------------------TAA-AACTT-AAACATTG-----TCC--------C
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 9921 23 +     41958 G---G--A--G-----------A---A-T-A-T-----------------------------TTA-AACTA-AAACAT-------------------
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 4
s Tamandua_tetradactyla.TamTet_scaffold_1782                 71458 24 +    116680 --------------------------A-A-T-A-----------------------------TTA-AAACC-AAACATTG-----CCC--------C
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 10 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118079 30 -    156842 G---G--A--A-----------A---A-T-A-T-----------------------------TTA-GACTA-AAACATTG-----CCC-C------A
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    386532 30 +    539355 G---G--A--A-----------A---A-T-A-T-----------------------------TTA-GACTA-AAACATTG-----CCC-C------A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               25754 29 +     70052 A---G--A--T-----------A---C-T-C-T-----------------------------TAC-ATCTT-AAACAGTG-----TCC--------G
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                 589 29 -     16117 A---G--A--T-----------A---C-T-C-T-----------------------------TAC-AACTT-AAACAGTG-----TCC--------G
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186427876 29 + 186847797 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----tcc--------c
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     80251 30 +    610378 G---G--A--A-----------A---G-T-A-T-----------------------------TTA-AACTA-AAACACTG-----TCC-C------A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         10279 29 -     20410 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    14473 29 +     15221 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                       10380 29 +     19930 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       6807 29 -     19997 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            46931 29 -     60166 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        14402 29 -     27529 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     14346 29 -     18194 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           8074 29 -     21137 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    6777 29 -     10723 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         5933 29 +      9834 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        24246 29 +     32220 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5938348 29 +   6242583 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        7600 29 +     20839 G---G--A--G-----------A---A-A-T-G-----------------------------TAA-AACTT-AAGCATTG-----TCC--------C
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2155002 29 +   4065304 G---G--A--A-----------A---A-A-T-C-----------------------------TTG-AGCTG-AAATATTG-----TCC--------C
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     8650 29 -     10553 G---G--A--A-----------A---A-A-T-T-----------------------------TTG-AACTG-AAATATTG-----CCC--------C
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   52660 20 -     77625 --------------------------------------------------------------TAA-TACTA-AAATGTTA-----CCA--------C
i Uropsilus_gracilis.UroGra_scaffold_12083               I 8 C 0
s Ursus_maritimus.KK499267.1                               4849751 30 -   5085361 g---g--a--a-----------a---a-t-a-t-----------------------------tta-aacta-aaacattG-----CCC-C------A
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  10844 20 +     50397 --------------------------------------------------------------TAA-CACTG-ACATATTT-----TCC--------A
i Varecia_rubra.k141_590885                              I 8 I 6
s Varecia_variegata.k141_1128296                             10899 20 +     24756 --------------------------------------------------------------TAA-CACTG-ACATATTT-----TCC--------A
i Varecia_variegata.k141_1128296                         I 8 I 10
s Vicugna_pacos.KN270157.1                                 5371202 20 -   5488506 --------------------------------------------------------------tta-aacta-aaacaCTG-----CCC--------A
i Vicugna_pacos.KN270157.1                               I 9 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10121 16 -     43706 --------------------------------------------------------------------TTA-AAATATTG-----CTC-C------A
i Vulpes_lagopus.VulLag_flattened_line_30954             I 9 C 0
s Xerus_inauris.XerIna_scaffold_48378                        23747 28 -     24430 G---A--A--A-----------A---A-A-T-T-----------------------------T-AAAACCT-A------AACATTGCC--------C
i Xerus_inauris.XerIna_scaffold_48378                    C 0 I 1
s Zalophus_californianus.ZalCal_flattened_line_17732          4483 30 +     86975 G---G--C--A-----------A---A-T-A-T-----------------------------TTA-AACTA-AAACATTA-----CTC-C------A
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      14327 10 +     63895 ATTTG--T--T-----------T---A-A--------------------------------------------------------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 10
e Echinops_telfairi.JH980293.1                            48779651 164 + 111700974 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   3761  0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50341  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352  0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            62473  5 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Colobus_guereza.LG01                                   199948958  0 + 200372422 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_713168             206  0 -      2554 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    136758  0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6095 2 +     62944 A-A
s Acinonyx_jubatus.LLWD01001279.1                           826673 2 -   1699592 A-G
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 1
s Acomys_cahirinus.AcoCah_scaffold_11939                     24732 2 -     89785 C-T
i Acomys_cahirinus.AcoCah_scaffold_11939                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9509921 2 -  29979442 A-C
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 1
s Ailurus_fulgens.LNAC01001112.1                             78692 2 -    347723 A-G
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 1
s Allenopithecus_nigroviridis.k141_3361533                   14012 2 -     52922 A-A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         13954 2 -     28001 A-A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          4450 2 -     18505 A-A
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           5303 2 -     12518 A-A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184419 2 +    412891 A-A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 1
s Aplodontia_rufa.AprRuf_scaffold_68852                      11255 2 +     20879 C-T
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       10750 2 +     14667 A-A
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3831 2 +     43469 A-A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 1
s Avahi_laniger.k141_765380                                  53138 2 -     92717 T-T
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              53767 2 +     85213 T-T
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Camelus_bactrianus.KN276810.1                           10001736 2 -  17673402 A-A
i Camelus_bactrianus.KN276810.1                          C 0 I 1
s Camelus_dromedarius.KN272107.1                           2334194 2 -   7040546 A-A
i Camelus_dromedarius.KN272107.1                         C 0 I 1
s Camelus_ferus.KB017975.1                                  402477 2 -   1652518 A-A
i Camelus_ferus.KB017975.1                               C 0 I 1
s CanFam4.chr16                                           17798522 2 -  60362399 A-G
i CanFam4.chr16                                          C 0 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184579 2 -    185531 A-G
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 I 1
s Canis_lupus_dingo.QKWQ01000480.1                         9033965 2 -   9314153 A-G
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 1
s Canis_lupus_familiaris.chr16                            17958230 2 -  59632846 A-G
i Canis_lupus_familiaris.chr16                           C 0 I 1
s Canis_lupus_orion.HG994398.1                            18499742 2 +  63665305 A-G
i Canis_lupus_orion.HG994398.1                           C 0 I 1
s Carlito_syrichta.NW_007247396.1                           200775 2 +    308752 a-a
i Carlito_syrichta.NW_007247396.1                        I 29 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                4194 2 -     11696 A-A
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 1
s Catagonus_wagneri.CatWag_scaffold_2839                     92351 2 +    217609 A-G
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 1
s Cephalopachus_bancanus.k141_1423433                         4790 2 +     31688 A-A
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12230784 2 +  27778364 A-A
i Ceratotherium_simum.JH767749.1                         C 0 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1811 2 -     25243 A-A
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 I 1
s Cercocebus_atys.KQ010504.1                               4474965 2 +   4669795 a-a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        13510 2 -     19203 A-A
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           7936 2 +      8260 A-A
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           8162 2 +     27781 A-A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         8322 2 -     20310 A-A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          11301 2 +     29689 A-A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            5730 2 +      9989 A-A
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          13980 2 -     27936 A-A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            2846 2 -     17152 A-A
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38816380 2 +  39242232 A-A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222075 2 -  21565898 A-A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       39193 2 -     53127 A-A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        6461 2 +      7159 A-A
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       13996 2 -     27947 A-A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         13969 2 +     17596 A-A
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          3203 2 +     26000 A-A
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Chlorocebus_aethiops.ctg25                              18427954 2 -  18827391 A-A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       14391 2 -     50209 A-A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135421391 2 + 135778131 a-a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 17209 2 +     19366 A-A
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            172309 2 +    839153 A-A
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1909907 2 +   2368649 G-A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_polykomos.k141_906115                              36445 2 +     84244 G-A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17547440 3 -  53390261 AAA
i Condylura_cristata.JH655891.1                          C 0 I 1
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          13656 2 -     20389 A-A
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 1
s Cricetomys_gambianus.CriGam_scaffold_18520                 49492 2 +     63868 C-C
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11666970 2 + 224834208 C-C
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               1974 2 -     19598 A-A
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27827 2 -     87169 A-G
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 1
s Ctenodactylus_gundi.CteGun_scaffold_65                    836544 2 +   1526836 C-G
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12536755 2 -  12879189 A-T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8629209 2 +  20541912 A-A
i Desmodus_rotundus.KZ672289.1                           C 0 I 1
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672635 2 +   1390856 A-A
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 1
s Diceros_bicornis.DicBicMic_scaffold_5955                    5387 2 +    198055 A-A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 1
s Eidolon_helvum.KE759718.1                                   9866 2 +     11740 A-A
i Eidolon_helvum.KE759718.1                              C 0 I 1
s Elephantulus_edwardii.JH947257.1                         1097085 2 +  10337057 A-A
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          90463 2 +    110024 C-C
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01109367.1                             645 2 +      6299 C-C
i Ellobius_talpinus.LOJH01109367.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16328659 2 -  41312741 A-G
i Enhydra_lutris.KZ291758.1                              C 0 I 1
s Eptesicus_fuscus.JH977646.1                              2144790 2 -  14770903 A-A
i Eptesicus_fuscus.JH977646.1                            C 0 I 1
s Equus_asinus.JREZ01000139.1                              1282698 2 +   4378816 A-A
i Equus_asinus.JREZ01000139.1                            C 0 I 1
s Equus_caballus.CM000403.2                               18530519 2 -  39960074 A-A
i Equus_caballus.CM000403.2                              C 0 I 1
s Equus_przewalskii.KK951119.1                               32534 2 +    498745 A-A
i Equus_przewalskii.KK951119.1                           C 0 I 1
s Erythrocebus_patas.Contig38                             21204561 2 -  21539334 A-A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Felis_catus.CM001381.2                                  20236324 2 + 206538554 A-G
i Felis_catus.CM001381.2                                 C 0 I 1
s Felis_catus_fca126.CM031415.1                           20195167 2 + 205367284 A-G
i Felis_catus_fca126.CM031415.1                          C 0 I 1
s Felis_nigripes.FelNig_flattened_line_20823                  8681 2 -     36744 A-G
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 1
s Galago_moholi.ctg2040                                     425698 2 -    453645 A-A
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             3405 2 +     11339 A-A
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                             708 2 +     41679 A-A
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840                526 2 -      9135 A-A
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              15350 2 -     32273 A-A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186337496 2 + 186649187 a-a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6299 2 -     19426 T-T
i Hapalemur_alaotrensis.k141_170648                      I 5 C 0
s Hapalemur_gilberti.k141_488810                             11448 2 -     15286 T-T
i Hapalemur_gilberti.k141_488810                         I 5 C 0
s Hapalemur_griseus.k141_1511508                             13087 2 +     18253 T-T
i Hapalemur_griseus.k141_1511508                         I 5 C 0
s Hapalemur_meridionalis.k141_248335                         13188 2 -     41752 T-T
i Hapalemur_meridionalis.k141_248335                     I 5 C 0
s Hapalemur_occidentalis.k141_907772                         13026 2 -     16460 T-T
i Hapalemur_occidentalis.k141_907772                     I 5 C 0
s Helogale_parvula.HelPar_flattened_line_2585               241661 2 +    327341 G-G
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 1
s Heterohyrax_brucei.HetBruBak_scaffold_596025                 144 2 +       452 A-A
i Heterohyrax_brucei.HetBruBak_scaffold_596025           I 80 I 2
s Hoolock_leuconedys.ctg274                                    434163 2 +    630532 A-A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  43822 2 +     55795 A-G
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 1
s Hylobates_agilis.k141_232023                                1929 2 -     12752 A-A
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                               1973 2 +     14092 A-A
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189542756 2 - 191637585 A-A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3335651 2 -  11177569 A-A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7519379 2 -   7955117 t-c
i Ictidomys_tridecemlineatus.JH393364.1                  I 1 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    13199 2 -     42476 A-A
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 1
s Lemur_catta.scaffold_24                                 15523531 2 -  30322482 T-T
i Lemur_catta.scaffold_24                                I 5 C 0
s Lepilemur_ankaranensis.k141_596936                         10414 1 -     23766 --T
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             28480 1 +     45836 --T
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1026 1 +     25010 --T
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      26416 1 +     54090 --T
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3042198 2 +   3914936 A-G
i Leptonychotes_weddellii.KB714746.1                     C 0 I 1
s Lepus_americanus.LepAme_scaffold_107385                     5598 2 -     14121 A-A
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1436512 2 +   1826925 A-A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5084 2 +     11245 A-A
i Loris_lydekkerianus.k141_2539221                       C 0 I 1
s Loris_tardigradus.ctg83                                  1003934 2 +   6120653 A-A
i Loris_tardigradus.ctg83                                C 0 I 1
s Loxodonta_africana.GL010049.1                            4216500 2 -  43346337 a-a
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17954470 2 -  59628241 A-G
i Lycaon_pictus.CM007581.1                               C 0 I 1
s Macaca_arctoides.k141_2326796                               6320 2 +     40492 A-A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59675581 2 +  60120075 A-A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 12093 2 -     26193 A-A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            79876 2 -    114318 A-A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  5567 2 -     23192 A-A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                15038 2 -     29190 A-A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  23603 2 +     37952 A-A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186838691 2 + 187317192 a-a
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25457255 2 -  25927173 a-a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  79454 2 +     89720 A-A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 6452 2 +     20474 A-A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   6252 2 -     14993 A-A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  329118 2 -    668171 A-A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 4567 2 -     24072 A-A
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               25191 2 -     45290 A-A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 89951 2 +     94391 A-A
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 1
s Mandrillus_leucophaeus.scaffold280                      23936786 2 -  24302211 A-A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               350915 2 +    752769 A-A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33101689 2 -  40650429 t-c
i Marmota_marmota.CZRN01000018.1                         I 1 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         9672 2 -    207569 A-A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 1
s Mellivora_capensis.MelCap_flattened_line_69365              9376 2 +     13704 A-G
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 1
s Meriones_unguiculatus.MerUng_scaffold_7390                 32170 2 +    140813 C-C
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12181652 2 -  29670104 C-C
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Microcebus_murinus.CM007674.1                           18290936 2 -  93316391 t-t
i Microcebus_murinus.CM007674.1                          I 14 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    20926 2 -    145209 a-t
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                14751 2 -     19307 A-A
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 1
s Miniopterus_natalensis.LDJU01000034.1                    1849982 2 +   8254450 A-A
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 1
s Miniopterus_schreibersii.MinSch_scaffold_18080             33659 2 +     64694 A-A
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 1
s Miopithecus_ogouensis.k141_534055                           8506 2 -     28506 A-A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         5066 2 -      8324 A-G
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 1
s Mirza_zaza.k141_952172                                      8485 2 -     37649 T-T
i Mirza_zaza.k141_952172                                 I 14 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140697 2 -    366855 A-A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 1
s Mungos_mungo.MunMun_flattened_line_23663                   34775 2 +     37127 G-G
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 1
s Murina_feae.MurFea_scaffold_85699                           5854 2 +     14753 A-A
i Murina_feae.MurFea_scaffold_85699                      C 0 I 1
s Mus_caroli.LT608237.1                                   84360773 2 - 120012414 C-C
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87649773 2 - 129401213 C-C
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31354429 2 -  89631738 C-C
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90751833 2 - 130317789 c-c
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               300554 2 -  14710649 A-G
i Mustela_putorius.JH418006.1                            C 0 I 1
s Myotis_brandtii.KE162005.1                                279027 2 -  10118263 A-A
i Myotis_brandtii.KE162005.1                             C 0 I 1
s Myotis_davidii.KB100139.1                                1586720 2 -   6019432 A-A
i Myotis_davidii.KB100139.1                              C 0 I 1
s Myotis_lucifugus.GL429869.1                              3902792 2 -   4330536 A-A
i Myotis_lucifugus.GL429869.1                            C 0 I 1
s Myotis_myotis.MyoMyo_scaffold_28916                        33347 2 +     33610 A-A
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 I 1
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              188127 2 +    196477 A-A
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2033257 2 -   3037898 c-a
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               14502 1 +     21681 --A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306320 2 +  31847680 A-G
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 1
s Nyctereutes_procyonoides.CAJHUB010000658.1               9148724 2 -   9404916 A-G
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 1
s Nycticebus_bengalensis.LG01                            102578911 2 - 196305487 A-A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_771082                               756 2 -      2667 A-A
i Nycticebus_coucang.k141_771082                         C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749332 2 + 199412804 A-A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1362754 2 +   3988456 A-A
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              506005 2 -   2017862 A-G
i Odobenus_rosmarus.KB229312.1                           C 0 I 1
s Ondatra_zibethicus.OndZib_scaffold_46174                    3643 2 -     28053 C-C
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    79560 2 +    102263 T-A
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9215 2 -     18566 A-A
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67146427 2 + 174332312 A-A
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       461692 2 -    559221 A-G
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 1
s Otolemur_crassicaudatus.k141_222918                         3230 2 +      8798 A-A
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             695394 2 -   1103335 a-a
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    43443 2 +     80009 a-a
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189142352 2 + 189151597 A-A
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  150526 2 +    230217 A-G
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 1
s Panthera_pardus.KV860321.1                                263732 2 +  18783137 A-G
i Panthera_pardus.KV860321.1                             C 0 I 1
s Panthera_tigris.KE722367.1                               4720370 2 -   8748460 A-G
i Panthera_tigris.KE722367.1                             C 0 I 1
s Papio_anubis.CM001495.2                                183442535 2 + 183742232 a-a
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             6233 2 +     20448 A-A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563041 2 +  20919399 A-A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   4977 2 +     41871 A-A
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     8262 2 +     27711 A-A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  8340 2 +      9205 A-A
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11992 2 -     78924 A-G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 1
s Perodicticus_ibeanus.k141_855320                            9378 2 +     13100 A-A
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             7780 2 +     25941 A-A
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18194179 2 -  18517816 C-A
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Piliocolobus_badius.k141_1234363                           43005 2 +     62158 G-A
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        37736 2 +     89929 G-A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            39152 2 +     51399 G-A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14295390 2 -  14605196 G-A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1184 2 +     22620 A-A
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 1
s Pongo_abelii.CM009266.2                                189130483 2 + 189387572 a-a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570091 2 +   9816681 A-A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               72675 1 -     81375 --A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              4495 1 +     19060 --A
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 12343 2 -     22811 A-A
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 I 2
s Prolemur_simus.MPIZ01000396.1                            2596209 2 -   4620579 t-t
i Prolemur_simus.MPIZ01000396.1                          I 5 C 0
s Propithecus_coquerelli.NW_012148875.1                     990179 2 +   2598838 c-t
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          28489 2 +     38485 C-T
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                               534 2 -     13098 C-T
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26010 2 +     35766 C-T
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4198 2 -     24134 C-T
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28020 2 -     67325 C-T
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4242 2 -      6182 C-T
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             9804 2 -     21651 C-C
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            14039 2 -     21811 A-A
i Pteronotus_parnellii.KE909381.1                        C 0 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39576 2 +     42204 A-G
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 1
s Pteropus_alecto.KB030862.1                              22976122 2 +  28871421 a-a
i Pteropus_alecto.KB030862.1                             C 0 I 1
s Pteropus_vampyrus.KN525825.1                             1359208 2 +   4952924 a-a
i Pteropus_vampyrus.KN525825.1                           C 0 I 1
s Puma_concolor.QAVW01001104.1                            20273680 2 -  38429054 A-G
i Puma_concolor.QAVW01001104.1                           C 0 I 1
s Pygathrix_cinerea.k141_1153803                             14502 1 -     91421 --T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7608625 1 +   7812017 --T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             14473 1 -     72585 --T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53570047 2 +  90668790 C-C
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             6190 1 -     11128 --A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91235546 1 - 195417433 --A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7671195 1 +   7961872 --A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87140 2 -     96226 T-A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 1
s Scalopus_aquaticus.ScaAqu_scaffold_662                    152508 3 -    313613 AAA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 1
s Semnopithecus_entellus.k141_11662                          19014 1 -     19888 --A
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26217 1 +     39453 --A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            6736 1 +     27826 --A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             6257 1 -     19483 --A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      6325 1 +      7198 --A
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         14583 1 +     15514 --A
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11328 2 -     12148 C-A
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               3143 2 +   1910179 C-A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 1
s Sorex_araneus.JH798187.1                                13650023 2 -  18376816 a-a
i Sorex_araneus.JH798187.1                               C 0 I 1
s Spermophilus_dauricus.KZ294078.1                         1952573 2 -   3870691 t-c
i Spermophilus_dauricus.KZ294078.1                       I 1 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30079 2 +     97271 A-G
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 1
s Suricata_suricatta.SurSur_flattened_line_6629              17661 2 -    196729 G-G
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 1
s Sus_scrofa.CM000828.4                                    6809837 2 +  69701581 A-G
i Sus_scrofa.CM000828.4                                  C 0 I 1
s Symphalangus_syndactylus.tarseq_199                      1092798 2 -   1523678 A-A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 9948 2 +     41958 A-A
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 4 I 1
s Tamandua_tetradactyla.TamTet_scaffold_1782                 71482 2 +    116680 A-A
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118109 2 -    156842 A-A
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 1
s Tapirus_terrestris.TapTer_scaffold_755                    386562 2 +    539355 A-A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 1
s Tarsius_lariang.k141_2201908                               25783 2 +     70052 A-A
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                 618 2 -     16117 A-A
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186427905 2 + 186847797 a-a
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     80281 2 +    610378 T-G
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 1
s Trachypithecus_auratus.k141_722599                         10308 1 -     20410 --A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    14502 1 +     15221 --A
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                       10409 1 +     19930 --A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       6836 1 -     19997 --A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            46960 1 -     60166 --A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        14431 1 -     27529 --A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     14375 1 -     18194 --A
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           8103 1 -     21137 --A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    6806 1 -     10723 --A
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         5962 1 +      9834 --A
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        24275 1 +     32220 --A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5938377 1 +   6242583 --A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        7629 1 +     20839 --A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2155031 2 +   4065304 A-A
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     8679 2 -     10553 A-A
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   52680 3 -     77625 AAA
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 1
s Ursus_maritimus.KK499267.1                               4849781 2 -   5085361 A-C
i Ursus_maritimus.KK499267.1                             C 0 I 1
s Vicugna_pacos.KN270157.1                                 5371222 2 -   5488506 A-A
i Vicugna_pacos.KN270157.1                               C 0 I 1
s Vulpes_lagopus.VulLag_flattened_line_30954                 10137 2 -     43706 A-G
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 1
s Xerus_inauris.XerIna_scaffold_48378                        23776 2 -     24430 C-T
i Xerus_inauris.XerIna_scaffold_48378                    I 1 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          4513 2 +     86975 A-G
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 1
e Echinops_telfairi.JH980293.1                            48779651 164 + 111700974 I
e Sapajus_macrocephalus.k141_351809                          55103 0 -     80660 C
e Sapajus_apella.ctg103                                    5420062 0 -   5703754 C
e Saimiri_ustus.k141_1484609                                 22735 0 -     61129 C
e Saimiri_sciureus.k141_2278166                               2473 0 -     23631 C
e Saimiri_oerstedii.k141_1487881                             39467 0 -     64574 C
e Saimiri_macrodon.k141_716185                               22839 0 +     45824 C
e Saimiri_cassiquiarensis.k141_2188234                       22744 0 +     46362 C
e Saimiri_boliviensis.NW_024100920.1                     119950288 0 - 121099817 C
e Saguinus_mystax.k141_374627                                 7360 0 -      9399 C
e Saguinus_midas.LG03                                    209468633 0 + 209938924 C
e Saguinus_labiatus.k141_285685                               7798 0 +      8564 C
e Saguinus_inustus.k141_699149                               12934 0 +     13640 C
e Saguinus_imperator.k141_2524406                             1511 0 +      2197 C
e Saguinus_bicolor.k141_2619299                               7558 0 -      8359 C
e Mico_schneideri.k141_1950671                                      5173 0 -      7356 C
e Mico_humeralifer.k141_1976199                               4234 0 +     18990 C
e Mico_argentatus.k141_1239457                                5161 0 -      7380 C
e Leontopithecus_rosalia.k141_464620                         25093 0 +     66356 C
e Leontopithecus_chrysomelas.k141_1519602                    28396 0 +     38576 C
e Leontocebus_nigricollis.k141_4610752                        6919 0 +     35603 C
e Leontocebus_illigeri.k141_3350179                           4203 0 +      4941 C
e Leontocebus_fuscicollis.k141_1820339                        6876 0 +     64341 C
e Chiropotes_albinasus.k141_2813271                          10495 5 +     11226 I
e Cebus_unicolor.k141_544048                                 49306 0 -     74725 C
e Cebus_olivaceus.k141_398305                                  974 0 +      1777 C
e Cebus_albifrons.Contig27                                25651397 0 +  26074798 C
e Cebuella_pygmaea.k141_1309012                               5344 0 -      7577 C
e Cebuella_niveiventris.k141_1251222                          9246 0 -     11392 C
e Callithrix_kuhlii.k119_1164682                             11331 0 -     12001 C
e Callithrix_jacchus.pat_scaffold_3                       23589801 0 - 189096842 C
e Callithrix_geoffroyi.k119_512088                            4587 0 +      5267 C
e Callimico_goeldii.k141_1091182                             24096 0 +     31915 C
e Callibella_humilis.k141_1278103                             4621 0 -     10423 C
e Aotus_vociferans.k141_344750                               28013 0 -     47192 C
e Aotus_trivirgatus.k141_2152450                             14889 0 -     34685 C
e Aotus_nancymaae.KZ198451.1                               4297284 0 -   5030052 C
e Aotus_griseimembra.k141_2240599                            14887 0 -     34016 C
e Aotus_azarae.k141_3104676                                  14867 0 -     33861 C
e Alouatta_seniculus.k141_117119                             14238 0 +     50774 C
e Alouatta_puruensis.k141_1253230                             3015 0 -      3544 C
e Alouatta_palliata.k141_2135620                              2905 0 +     47717 C
e Alouatta_nigerrima.k141_3472759                            17516 0 -     18578 C
e Alouatta_juara.k141_1509701                                24218 0 +     25266 C
e Alouatta_discolor.k141_743489                               3011 0 -     45847 C
e Alouatta_caraya.k141_1743867                                2881 0 +      3134 C
e Alouatta_belzebul.k141_3238538                              2751 0 -     27731 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      14337 10 +     63895 I
e Varecia_variegata.k141_1128296                             10919 10 +     24756 I
e Varecia_rubra.k141_590885                                  10864 6 +     50397 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   3761 0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937 0 +    114563 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813 0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50341 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352 0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Indri_indri.k141_3655594                                   21973 0 +     31101 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547 0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eulemur_sanfordi.k141_1122526                              13218 10 +    111500 I
e Eulemur_rufus.k141_1476633                                  3643 11 -     17153 I
e Eulemur_rubriventer.k141_571033                            13034 10 +     26496 I
e Eulemur_mongoz.k141_232305                                 10105 10 +     97555 I
e Eulemur_macaco.k141_1562045                                12169 16 +     75513 I
e Eulemur_fulvus.k141_544389                                 13408 10 +     23973 I
e Eulemur_flavifrons.k141_1184614                            12169 16 +     26330 I
e Eulemur_coronatus.k141_885031                              14969 10 -     25546 I
e Eulemur_collaris.k141_377015                                5941 13 -     16928 I
e Eulemur_albifrons.k141_342033                              13242 11 -     14127 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084 0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            62473 5 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Colobus_guereza.LG01                                   199948958 0 + 200372422 C
e Chinchilla_lanigera.JH722012.1                           1251498 0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           15891 8 +     57038 I
e Cheirogaleus_major.k141_333249                             20524 10 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_713168             206 0 -      2554 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157 0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    136758 0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74054 10 -     89534 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       6097 5 +     62944 A-T--A-T-----T
s Acinonyx_jubatus.LLWD01001279.1                           826676 4 -   1699592 --T--T-T-----G
i Acinonyx_jubatus.LLWD01001279.1                        I 1 C 0
s Acomys_cahirinus.AcoCah_scaffold_11939                     24734 5 -     89785 A-C--A-A-----T
i Acomys_cahirinus.AcoCah_scaffold_11939                 C 0 I 5
s Ailuropoda_melanoleuca.LNAT01000098.1                    9509924 4 -  29979442 --T--T-T-----G
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 1 C 0
s Ailurus_fulgens.LNAC01001112.1                             78695 4 -    347723 --T--T-T-----G
i Ailurus_fulgens.LNAC01001112.1                         I 1 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14014 5 -     52922 A-T--A-T-----T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         13956 5 -     28001 A-T--A-T-----T
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          4452 5 -     18505 A-T--A-T-----T
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           5305 5 -     12518 A-T--A-T-----T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                              2751 5 -     27731 A-C--T-C-----T
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                2881 5 +      3134 A-C--T-T-----T
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               3011 5 -     45847 A-C--T-C-----T
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                24218 5 +     25266 A-C--T-C-----G
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_nigerrima.k141_3472759                            17516 5 -     18578 A-C--T-C-----G
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              2905 5 +     47717 A-C--T-C-----G
i Alouatta_palliata.k141_2135620                         C 0 I 18
s Alouatta_puruensis.k141_1253230                             3015 5 -      3544 A-C--T-C-----G
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             14238 5 +     50774 A-C--T-C-----G
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184422 4 +    412891 --G--T-T-----G
i Anoura_caudifer.AnoCau_scaffold_1412                   I 1 C 0
s Aotus_azarae.k141_3104676                                  14867 5 -     33861 A-T--T-C-----G
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            14887 5 -     34016 A-T--T-C-----G
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297284 5 -   5030052 A-T--T-C-----g
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             14889 5 -     34685 A-T--T-C-----G
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28013 5 -     47192 A-T--T-C-----G
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      11257 5 +     20879 A-T--T-A-----T
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       10752 4 +     14667 T-T--C-T------
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3834 4 +     43469 --G--T-T-----G
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 1 C 0
s Avahi_laniger.k141_765380                                  53140 5 -     92717 T-T--T-T-----T
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              53769 5 +     85213 T-T--T-T-----T
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             4621 5 -     10423 A-T--T-C-----G
i Callibella_humilis.k141_1278103                        C 0 I 3
s Callimico_goeldii.k141_1091182                             24096 5 +     31915 A-T--T-C-----G
i Callimico_goeldii.k141_1091182                         C 0 I 2
s Callithrix_geoffroyi.k119_512088                            4587 5 +      5267 A-G--T-C-----A
i Callithrix_geoffroyi.k119_512088                       C 0 I 3
s Callithrix_jacchus.pat_scaffold_3                       23589801 5 - 189096842 A-G--T-C-----A
i Callithrix_jacchus.pat_scaffold_3                      C 0 I 3
s Callithrix_kuhlii.k119_1164682                             11331 5 -     12001 A-G--T-C-----G
i Callithrix_kuhlii.k119_1164682                         C 0 I 3
s Camelus_bactrianus.KN276810.1                           10001739 4 -  17673402 --G--T-T-----G
i Camelus_bactrianus.KN276810.1                          I 1 C 0
s Camelus_dromedarius.KN272107.1                           2334197 4 -   7040546 --G--T-T-----G
i Camelus_dromedarius.KN272107.1                         I 1 C 0
s Camelus_ferus.KB017975.1                                  402480 4 -   1652518 --G--T-T-----G
i Camelus_ferus.KB017975.1                               I 1 C 0
s CanFam4.chr16                                           17798525 3 -  60362399 --T--T-C------
i CanFam4.chr16                                          I 1 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184582 3 -    185531 --T--T-C------
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 1 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9033968 3 -   9314153 --T--T-C------
i Canis_lupus_dingo.QKWQ01000480.1                       I 1 C 0
s Canis_lupus_familiaris.chr16                            17958233 3 -  59632846 --T--T-C------
i Canis_lupus_familiaris.chr16                           I 1 C 0
s Canis_lupus_orion.HG994398.1                            18499745 3 +  63665305 --T--T-C------
i Canis_lupus_orion.HG994398.1                           I 1 C 0
s Carlito_syrichta.NW_007247396.1                           200777 5 +    308752 a-t--t-t-----t
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                4197 4 -     11696 --G--T-T-----G
i Carollia_perspicillata.CarPer_scaffold_92756           I 1 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     92354 4 +    217609 --A--T-T-----G
i Catagonus_wagneri.CatWag_scaffold_2839                 I 1 C 0
s Cebuella_niveiventris.k141_1251222                          9246 5 -     11392 A-T--T-C-----G
i Cebuella_niveiventris.k141_1251222                     C 0 I 3
s Cebuella_pygmaea.k141_1309012                               5344 5 -      7577 A-T--T-C-----G
i Cebuella_pygmaea.k141_1309012                          C 0 I 3
s Cebus_albifrons.Contig27                                25651397 6 +  26074798 GGT--T-T-----T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_398305                                  974 6 +      1777 GGT--T-T-----T
i Cebus_olivaceus.k141_398305                            C 0 C 0
s Cebus_unicolor.k141_544048                                 49306 6 -     74725 GGT--T-T-----T
i Cebus_unicolor.k141_544048                             C 0 I 1
s Cephalopachus_bancanus.k141_1423433                         4792 5 +     31688 A-T--T-T-----T
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12230787 4 +  27778364 --G--T-T-----G
i Ceratotherium_simum.JH767749.1                         I 1 I 2
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1814 4 -     25243 --G--T-T-----G
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 1 I 2
s Cercocebus_atys.KQ010504.1                               4474967 5 +   4669795 a-t--a-t-----t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        13512 5 -     19203 A-T--A-T-----T
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           7938 5 +      8260 A-T--A-T-----T
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           8164 5 +     27781 A-T--A-T-----T
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         8324 5 -     20310 A-T--A-T-----T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          11303 5 +     29689 A-T--A-T-----T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            5732 5 +      9989 A-T--A-T-----T
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          13982 5 -     27936 A-T--A-T-----T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            2848 5 -     17152 A-T--A-T-----T
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38816382 5 +  39242232 A-T--A-T-----T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222077 5 -  21565898 A-T--A-T-----T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       39195 5 -     53127 A-T--A-T-----T
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        6463 5 +      7159 A-T--A-T-----T
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       13998 5 -     27947 A-T--A-T-----T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         13971 5 +     17596 A-T--A-T-----T
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          3205 5 +     26000 A-T--A-T-----T
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Chiropotes_albinasus.k141_2206961                             14 5 -     15524 g-t--t-t-----g
i Chiropotes_albinasus.k141_2206961                      n 5 I 365
s Chlorocebus_aethiops.ctg25                              18427956 5 -  18827391 A-T--A-T-----T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       14393 5 -     50209 A-T--A-T-----T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135421393 5 + 135778131 a-t--a-t-----t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 17211 6 +     19366 ATT--T-T-----G
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            172311 6 +    839153 Att--t-t-----g
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1909909 5 +   2368649 A-T--A-T-----T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_polykomos.k141_906115                              36447 5 +     84244 A-T--A-T-----T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17547444 5 -  53390261 --T-TT-T-----G
i Condylura_cristata.JH655891.1                          I 1 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          13659 4 -     20389 --G--G-T-----G
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 1 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 49494 5 +     63868 A-C--G-A-----T
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 5
s Cricetulus_griseus.LT883664.1                           11666972 7 + 224834208 A-CACT-G-----C
i Cricetulus_griseus.LT883664.1                          C 0 I 4
s Crocidura_indochinensis.CroInd_scaffold_37019               1977 4 -     19598 --T--T-G-----G
i Crocidura_indochinensis.CroInd_scaffold_37019          I 1 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27830 4 -     87169 --G--T-T-----T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 1 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    836546 5 +   1526836 A-C--T-A-----T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12536757 2 -  12879189 T-T-----------
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8629212 4 +  20541912 --G--T-T-----G
i Desmodus_rotundus.KZ672289.1                           I 1 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672638 4 +   1390856 --G--T-T-----G
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 1 I 2
s Diceros_bicornis.DicBicMic_scaffold_5955                    5390 4 +    198055 --G--T-T-----G
i Diceros_bicornis.DicBicMic_scaffold_5955               I 1 I 2
s Eidolon_helvum.KE759718.1                                   9869 3 +     11740 -----T-T-----G
i Eidolon_helvum.KE759718.1                              I 1 C 0
s Elephantulus_edwardii.JH947257.1                         1097087 6 +  10337057 ATT--T-T-----G
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          90465 7 +    110024 A-CACT-A-----T
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 8
s Ellobius_talpinus.LOJH01109367.1                             647 7 +      6299 A-CACT-A-----T
i Ellobius_talpinus.LOJH01109367.1                       C 0 I 7
s Enhydra_lutris.KZ291758.1                               16328662 4 -  41312741 --T--T-T-----A
i Enhydra_lutris.KZ291758.1                              I 1 C 0
s Eptesicus_fuscus.JH977646.1                              2144793 4 -  14770903 --G--T-T-----G
i Eptesicus_fuscus.JH977646.1                            I 1 C 0
s Equus_asinus.JREZ01000139.1                              1282701 4 +   4378816 --G--T-T-----G
i Equus_asinus.JREZ01000139.1                            I 1 C 0
s Equus_caballus.CM000403.2                               18530522 4 -  39960074 --G--T-T-----G
i Equus_caballus.CM000403.2                              I 1 C 0
s Equus_przewalskii.KK951119.1                               32537 4 +    498745 --G--T-T-----G
i Equus_przewalskii.KK951119.1                           I 1 C 0
s Erythrocebus_patas.Contig38                             21204563 5 -  21539334 A-T--A-T-----T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13253 2 -     14127 -------T-----T
i Eulemur_albifrons.k141_342033                          I 11 C 0
s Eulemur_collaris.k141_377015                                5954 2 -     16928 -------T-----T
i Eulemur_collaris.k141_377015                           I 13 C 0
s Eulemur_coronatus.k141_885031                              14979 4 -     25546 -------TTT---T
i Eulemur_coronatus.k141_885031                          I 10 C 0
s Eulemur_flavifrons.k141_1184614                            12185 7 +     26330 -------TTTTTTT
i Eulemur_flavifrons.k141_1184614                        I 16 C 0
s Eulemur_fulvus.k141_544389                                 13418 2 +     23973 -------T-----T
i Eulemur_fulvus.k141_544389                             I 10 C 0
s Eulemur_macaco.k141_1562045                                12185 4 +     75513 -------TTT---T
i Eulemur_macaco.k141_1562045                            I 16 C 0
s Eulemur_mongoz.k141_232305                                 10115 2 +     97555 -------T-----T
i Eulemur_mongoz.k141_232305                             I 10 C 0
s Eulemur_rubriventer.k141_571033                            13044 2 +     26496 -------T-----T
i Eulemur_rubriventer.k141_571033                        I 10 C 0
s Eulemur_rufus.k141_1476633                                  3654 2 -     17153 -------T-----T
i Eulemur_rufus.k141_1476633                             I 11 C 0
s Eulemur_sanfordi.k141_1122526                              13228 2 +    111500 -------T-----T
i Eulemur_sanfordi.k141_1122526                          I 10 C 0
s Felis_catus.CM001381.2                                  20236327 4 + 206538554 --T--T-T-----G
i Felis_catus.CM001381.2                                 I 1 C 0
s Felis_catus_fca126.CM031415.1                           20195170 4 + 205367284 --T--T-T-----G
i Felis_catus_fca126.CM031415.1                          I 1 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  8684 4 -     36744 --T--T-T-----G
i Felis_nigripes.FelNig_flattened_line_20823             I 1 C 0
s Galago_moholi.ctg2040                                     425700 6 -    453645 T-T--C-T----CT
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             3407 6 +     11339 T-T--C-T----CT
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                             710 6 +     41679 T-T--C-T----CT
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840                528 5 -      9135 A-T--T-T-----T
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 I 43
s Gorilla_beringei.k141_3596273                              15352 5 -     32273 A-T--A-T-----T
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186337498 5 + 186649187 a-t--a-t-----t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6301 3 -     19426 T-T--T--------
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             11450 3 -     15286 T-T--T--------
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13089 3 +     18253 T-T--T--------
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13190 3 -     41752 T-T--T--------
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13028 3 -     16460 T-T--T--------
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               241664 4 +    327341 --T--T-T-----G
i Helogale_parvula.HelPar_flattened_line_2585            I 1 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_596025                 148 6 +       452 ATT--T-T-----T
i Heterohyrax_brucei.HetBruBak_scaffold_596025           I 2 C 0
s Hoolock_leuconedys.ctg274                                    434165 5 +    630532 A-T--A-T-----T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  43825 4 +     55795 --T--T-T-----G
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 1 C 0
s Hylobates_agilis.k141_232023                                1931 5 -     12752 A-T--A-T-----T
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                               1975 5 +     14092 A-T--A-T-----T
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189542758 5 - 191637585 A-T--A-T-----T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3335653 5 -  11177569 A-T--A-T-----T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7519381 5 -   7955117 a-t--t-t-----t
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   21973 1 +     31101 -------------T
i Indri_indri.k141_3655594                               C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    13202 4 -     42476 --G--T-T-----G
i Lasiurus_borealis.LasBor_scaffold_32767                I 1 C 0
s Lemur_catta.scaffold_24                                 15523533 5 -  30322482 T-T--T-T-----T
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        6876 5 +     64341 A-T--T-C-----G
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           4203 5 +      4941 A-T--T-C-----G
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        6919 5 +     35603 A-T--T-C-----G
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    28396 5 +     38576 A-T--T-C-----A
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         25093 5 +     66356 A-T--T-C-----A
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         10415 5 -     23766 T-T--T-T-----T
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             28481 5 +     45836 T-T--T-T-----T
i Lepilemur_dorsalis.k141_577674                         C 0 I 9
s Lepilemur_ruficaudatus.k141_121139                          1027 5 +     25010 T-T--T-T-----T
i Lepilemur_ruficaudatus.k141_121139                     C 0 I 2
s Lepilemur_septentrionalis.k141_185316                      26417 5 +     54090 T-T--T-T-----T
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3042201 4 +   3914936 --T--T-T-----G
i Leptonychotes_weddellii.KB714746.1                     I 1 C 0
s Lepus_americanus.LepAme_scaffold_107385                     5600 5 -     14121 A-T--T-T-----T
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1436514 5 +   1826925 A-T--A-T-----T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5087 3 +     11245 -------T----CT
i Loris_lydekkerianus.k141_2539221                       I 1 C 0
s Loris_tardigradus.ctg83                                  1003937 3 +   6120653 -------T----CT
i Loris_tardigradus.ctg83                                I 1 C 0
s Loxodonta_africana.GL010049.1                            4216502 6 -  43346337 ttt--t-t-----t
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17954473 3 -  59628241 --T--T-C------
i Lycaon_pictus.CM007581.1                               I 1 C 0
s Macaca_arctoides.k141_2326796                               6322 5 +     40492 A-T--A-T-----T
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59675583 5 +  60120075 A-T--A-T-----T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 12095 5 -     26193 A-T--A-T-----T
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            79878 5 -    114318 A-T--A-T-----T
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  5569 5 -     23192 A-T--A-T-----T
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                15040 5 -     29190 A-T--A-T-----T
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  23605 5 +     37952 A-T--A-T-----T
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186838693 5 + 187317192 a-t--a-t-----t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25457257 5 -  25927173 a-t--a-t-----t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  79456 5 +     89720 A-T--A-T-----T
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 6454 5 +     20474 A-T--A-T-----T
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   6254 5 -     14993 A-T--A-T-----T
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  329120 5 -    668171 A-T--A-T-----T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 4569 5 -     24072 A-T--A-T-----T
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               25193 5 -     45290 A-T--A-T-----T
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 89954 3 +     94391 -----T-T-----G
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 1 C 0
s Mandrillus_leucophaeus.scaffold280                      23936788 5 -  24302211 A-T--A-T-----T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               350917 5 +    752769 A-T--A-T-----T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33101691 5 -  40650429 a-t--t-t-----t
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         9675 4 -    207569 --T--T-T-----T
i Megaderma_lyra.MegLyr_scaffold_4542                    I 1 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              9379 4 +     13704 --T--T-T-----A
i Mellivora_capensis.MelCap_flattened_line_69365         I 1 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 32172 5 +    140813 A-C--G-A-----T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 5
s Mesocricetus_auratus.KB708134.1                         12181654 7 -  29670104 A-CACT-C-----T
i Mesocricetus_auratus.KB708134.1                        C 0 I 5
s Mico_argentatus.k141_1239457                                5161 5 -      7380 A-T--T-C-----G
i Mico_argentatus.k141_1239457                           C 0 I 3
s Mico_humeralifer.k141_1976199                               4234 5 +     18990 A-T--T-C-----G
i Mico_humeralifer.k141_1976199                          C 0 I 3
s Mico_schneideri.k141_1950671                                      5173 5 -      7356 A-T--T-C-----G
i Mico_schneideri.k141_1950671                                 C 0 I 3
s Microcebus_murinus.CM007674.1                           18290938 5 -  93316391 t-t--t-t-----t
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    20928 6 -    145209 att--t-t-----g
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                14754 4 -     19307 --G--T-T-----G
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 1 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849985 4 +   8254450 --G--T-T-----G
i Miniopterus_natalensis.LDJU01000034.1                  I 1 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             33662 4 +     64694 --G--T-T-----G
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 1 C 0
s Miopithecus_ogouensis.k141_534055                           8508 5 -     28506 A-T--A-T-----T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         5069 4 -      8324 --T--T-T-----G
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 1 C 0
s Mirza_zaza.k141_952172                                      8487 5 -     37649 T-C--C-T-----T
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140700 4 -    366855 --C--T-T-----G
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 1 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   34778 4 +     37127 --T--T-T-----G
i Mungos_mungo.MunMun_flattened_line_23663               I 1 C 0
s Murina_feae.MurFea_scaffold_85699                           5857 4 +     14753 --G--T-T-----G
i Murina_feae.MurFea_scaffold_85699                      I 1 C 0
s Mus_caroli.LT608237.1                                   84360775 5 - 120012414 A-A--A-A-----T
i Mus_caroli.LT608237.1                                  C 0 I 5
s Mus_musculus.chr8                                       87649775 5 - 129401213 a-a--a-a-----t
i Mus_musculus.chr8                                      C 0 I 6
s Mus_pahari.LT608297.1                                   31354431 5 -  89631738 A-G--A-A-----T
i Mus_pahari.LT608297.1                                  C 0 I 5
s Mus_spretus.CM004101.1                                  90751835 5 - 130317789 a-a--a-a-----t
i Mus_spretus.CM004101.1                                 C 0 I 6
s Mustela_putorius.JH418006.1                               300557 4 -  14710649 --T--T-T-----A
i Mustela_putorius.JH418006.1                            I 1 C 0
s Myotis_brandtii.KE162005.1                                279030 4 -  10118263 --G--T-T-----G
i Myotis_brandtii.KE162005.1                             I 1 C 0
s Myotis_davidii.KB100139.1                                1586723 4 -   6019432 --G--T-T-----G
i Myotis_davidii.KB100139.1                              I 1 C 0
s Myotis_lucifugus.GL429869.1                              3902795 4 -   4330536 --G--T-T-----G
i Myotis_lucifugus.GL429869.1                            I 1 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        33350 4 +     33610 --G--T-T-----G
i Myotis_myotis.MyoMyo_scaffold_28916                    I 1 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              188129 6 +    196477 ATT--T-T-----G
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2033259 5 -   3037898 t-t--t-t-----t
i Nannospalax_galili.KL204047.1                          C 0 I 25
s Nasalis_larvatus.k141_413338                               14503 5 +     21681 A-T--A-T-----T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306323 4 +  31847680 --T--T-T-----G
i Neomonachus_schauinslandi.NINY01007730.1               I 1 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9148727 3 -   9404916 --T--T-C------
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 1 C 0
s Nycticebus_bengalensis.LG01                            102578913 6 - 196305487 T-T--C-T----CT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_771082                               758 6 -      2667 T-T--C-T----CT
i Nycticebus_coucang.k141_771082                         C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749334 6 + 199412804 T-T--C-T----CT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1362756 5 +   3988456 A-T--T-C-----C
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              506008 4 -   2017862 --T--T-T-----G
i Odobenus_rosmarus.KB229312.1                           I 1 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                    3645 7 -     28053 A-CACT-A-----T
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 7
s Onychomys_torridus.OnyTor_scaffold_2986                    79562 7 +    102263 A-TACT-A-----T
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 5
s Orycteropus_afer.OryAfe_flattened_line_144387               9217 6 -     18566 ATT--T-T-----G
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67146429 5 + 174332312 A-T--T-T-----T
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       461695 3 -    559221 --T--T-C------
i Otocyon_megalotis.JAEUCK010005147.1                    I 1 C 0
s Otolemur_crassicaudatus.k141_222918                         3232 6 +      8798 T-T--C-T----CT
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             695396 6 -   1103335 t-t--c-t----ct
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    43445 5 +     80009 a-t--a-t-----t
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189142354 5 + 189151597 a-t--a-t-----t
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  150529 4 +    230217 --T--T-T-----G
i Panthera_onca.PanOnc_flattened_line_3271               I 1 C 0
s Panthera_pardus.KV860321.1                                263735 4 +  18783137 --T--T-T-----G
i Panthera_pardus.KV860321.1                             I 1 C 0
s Panthera_tigris.KE722367.1                               4720373 4 -   8748460 --T--T-T-----G
i Panthera_tigris.KE722367.1                             I 1 C 0
s Papio_anubis.CM001495.2                                183442537 5 + 183742232 a-t--a-t-----t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             6235 5 +     20448 A-T--A-T-----T
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563043 5 +  20919399 A-T--A-T-----T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   4979 5 +     41871 A-T--A-T-----T
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     8264 5 +     27711 A-T--A-T-----T
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  8342 5 +      9205 A-T--A-T-----T
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11995 4 -     78924 --T--T-T-----G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 1 C 0
s Perodicticus_ibeanus.k141_855320                            9380 6 +     13100 T-T--C-T----CT
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             7782 6 +     25941 T-T--C-T----CT
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18194181 7 -  18517816 A-TACT-G-----T
i Peromyscus_maniculatus.KI615324.1                      C 0 I 5
s Piliocolobus_badius.k141_1234363                           43007 5 +     62158 A-T--A-T-----T
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        37738 5 +     89929 A-T--A-T-----T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            39154 5 +     51399 A-T--A-T-----T
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14295392 5 -  14605196 A-t--a-t-----t
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1187 4 +     22620 --G--T-T-----G
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 1 C 0
s Pongo_abelii.CM009266.2                                189130485 5 + 189387572 a-t--a-t-----t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570093 5 +   9816681 A-T--A-T-----T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               72676 5 -     81375 A-T--A-T-----T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              4496 5 +     19060 A-T--A-T-----T
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 12347 7 -     22811 ATT--T-TT----T
i Procavia_capensis.ProCapCap_scaffold_85530             I 2 C 0
s Prolemur_simus.MPIZ01000396.1                            2596211 5 -   4620579 t-t--t-t-----t
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990181 5 +   2598838 t-t--t-t-----t
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          28491 5 +     38485 T-T--T-T-----T
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                               536 5 -     13098 T-T--T-T-----T
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26012 5 +     35766 T-T--T-T-----T
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4200 5 -     24134 T-T--T-T-----T
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28022 5 -     67325 T-T--T-T-----T
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4244 5 -      6182 T-T--T-T-----T
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             9806 5 -     21651 A-C--G-A-----T
i Psammomys_obesus.NESX01036370.1                        C 0 I 5
s Pteronotus_parnellii.KE909381.1                            14042 4 -     21811 --G--C-T-----G
i Pteronotus_parnellii.KE909381.1                        I 1 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39579 4 +     42204 --T--C-T-----A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 1 C 0
s Pteropus_alecto.KB030862.1                              22976125 3 +  28871421 -----t-t-----g
i Pteropus_alecto.KB030862.1                             I 1 C 0
s Pteropus_vampyrus.KN525825.1                             1359211 3 +   4952924 -----t-t-----g
i Pteropus_vampyrus.KN525825.1                           I 1 C 0
s Puma_concolor.QAVW01001104.1                            20273683 4 -  38429054 --T--T-T-----G
i Puma_concolor.QAVW01001104.1                           I 1 C 0
s Pygathrix_cinerea.k141_1153803                             14503 5 -     91421 A-T--A-T-----T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7608626 5 +   7812017 A-T--A-T-----T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             14474 5 -     72585 A-T--A-T-----T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53570049 5 +  90668790 A-C--A-A-----T
i Rattus_norvegicus.chr16                                C 0 I 5
s Rhinopithecus_bieti.k119_217274                             6191 5 -     11128 A-T--A-T-----T
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91235547 5 - 195417433 A-T--A-T-----T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7671196 5 +   7961872 A-T--A-T-----T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87143 3 -     96226 -----T-T-----G
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 1 C 0
s Saguinus_bicolor.k141_2619299                               7558 5 -      8359 A-T--T-C-----G
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_imperator.k141_2524406                             1511 5 +      2197 A-T--T-C-----G
i Saguinus_imperator.k141_2524406                        C 0 C 0
s Saguinus_inustus.k141_699149                               12934 5 +     13640 A-T--T-C-----G
i Saguinus_inustus.k141_699149                           C 0 I 9
s Saguinus_labiatus.k141_285685                               7798 5 +      8564 A-T--T-C-----G
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209468633 5 + 209938924 A-T--T-C-----G
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 7360 5 -      9399 A-T--T-C-----G
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119950288 5 - 121099817 a-t--t-c-----a
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       22744 5 +     46362 A-T--T-C-----A
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               22839 5 +     45824 A-T--T-C-----A
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             39467 5 -     64574 A-T--T-C-----A
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               2473 5 -     23631 A-T--T-C-----A
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 22735 5 -     61129 A-T--T-C-----A
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420062 6 -   5703754 GGT--T-T-----T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          55103 6 -     80660 GGT--T-T-----T
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    152512 4 -    313613 --T--T-T-----G
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 1 C 0
s Semnopithecus_entellus.k141_11662                          19015 5 -     19888 A-T--A-T-----T
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26218 5 +     39453 A-T--A-T-----T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            6737 5 +     27826 A-T--A-T-----T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             6258 5 -     19483 A-T--A-T-----T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      6326 5 +      7198 A-T--A-T-----T
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         14584 5 +     15514 A-T--A-T-----T
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11330 7 -     12148 A-CACT-A-----C
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 I 5
s Solenodon_paradoxus.SolPar_flattened_line_126               3146 4 +   1910179 --T--C-T-----A
i Solenodon_paradoxus.SolPar_flattened_line_126          I 1 C 0
s Sorex_araneus.JH798187.1                                13650026 4 -  18376816 --a--t-g-----g
i Sorex_araneus.JH798187.1                               I 1 C 0
s Spermophilus_dauricus.KZ294078.1                         1952575 5 -   3870691 a-t--t-t-----t
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30082 4 +     97271 --T--T-T-----G
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 1 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              17664 4 -    196729 --T--T-T-----G
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 C 0
s Sus_scrofa.CM000828.4                                    6809840 4 +  69701581 --G--T-T-----G
i Sus_scrofa.CM000828.4                                  I 1 C 0
s Symphalangus_syndactylus.tarseq_199                      1092800 5 -   1523678 A-T--A-T-----T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 9951 4 +     41958 --G--T-T-----A
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 1 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 71484 6 +    116680 ATT--T-T-----G
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118112 4 -    156842 --G--T-T-----G
i Tapirus_indicus.TapInd_scaffold_9301                   I 1 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    386565 4 +    539355 --G--T-T-----G
i Tapirus_terrestris.TapTer_scaffold_755                 I 1 C 0
s Tarsius_lariang.k141_2201908                               25785 5 +     70052 A-T--T-T-----T
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                 620 5 -     16117 A-T--T-T-----T
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186427907 5 + 186847797 a-t--a-t-----t
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     80284 4 +    610378 --G--T-T-----G
i Tonatia_saurophila.TonSau_scaffold_294                 I 1 C 0
s Trachypithecus_auratus.k141_722599                         10309 5 -     20410 A-T--A-T-----T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    14503 5 +     15221 A-T--A-T-----T
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                       10410 5 +     19930 A-T--A-T-----T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       6837 5 -     19997 A-T--A-T-----T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            46961 5 -     60166 A-T--A-T-----T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        14432 5 -     27529 A-T--A-T-----T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     14376 5 -     18194 A-T--A-T-----T
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           8104 5 -     21137 A-T--A-T-----T
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    6807 5 -     10723 A-T--A-T-----T
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         5963 5 +      9834 A-T--A-T-----T
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        24276 5 +     32220 A-T--A-T-----T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5938378 5 +   6242583 A-T--A-T-----T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        7630 5 +     20839 A-T--A-T-----T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2155033 5 +   4065304 A-T--T-T-----T
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     8681 5 -     10553 G-T--T-T-----T
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   52684 4 -     77625 --T--T-T-----A
i Uropsilus_gracilis.UroGra_scaffold_12083               I 1 C 0
s Ursus_maritimus.KK499267.1                               4849784 4 -   5085361 --T--T-T-----G
i Ursus_maritimus.KK499267.1                             I 1 C 0
s Varecia_rubra.k141_590885                                  10870 5 +     50397 T-T--T-T-----T
i Varecia_rubra.k141_590885                              I 6 C 0
s Varecia_variegata.k141_1128296                             10929 5 +     24756 T-T--T-T-----T
i Varecia_variegata.k141_1128296                         I 10 C 0
s Vicugna_pacos.KN270157.1                                 5371225 4 -   5488506 --G--T-T-----G
i Vicugna_pacos.KN270157.1                               I 1 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10140 3 -     43706 --T--T-C------
i Vulpes_lagopus.VulLag_flattened_line_30954             I 1 C 0
s Xerus_inauris.XerIna_scaffold_48378                        23778 6 -     24430 A-T--TTT-----T
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          4516 4 +     86975 --T--T-T-----G
i Zalophus_californianus.ZalCal_flattened_line_17732     I 1 C 0
e Echinops_telfairi.JH980293.1                            48779651 164 + 111700974 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      14337 10 +     63895 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   3761 0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937 0 +    114563 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813 0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50341 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352 0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547 0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084 0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            62473 5 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Colobus_guereza.LG01                                   199948958 0 + 200372422 C
e Chinchilla_lanigera.JH722012.1                           1251498 0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           15891 8 +     57038 I
e Cheirogaleus_major.k141_333249                             20524 10 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_713168             206 0 -      2554 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157 0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    136758 0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74054 10 -     89534 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       6102  4 +     62944 C----------------------------T---------T---------------T
s Acinonyx_jubatus.LLWD01001279.1                           826680  4 -   1699592 G----------------------------G---------G---------------G
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_11939                     24744  2 -     89785 T----------------------------T--------------------------
i Acomys_cahirinus.AcoCah_scaffold_11939                 I 5 I 1
s Ailuropoda_melanoleuca.LNAT01000098.1                    9509928  4 -  29979442 G----------------------------G---------G---------------T
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             78699  4 -    347723 G----------------------------G---------G---------------C
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     74064  2 -     89534 T----------------------------T--------------------------
i Allactaga_bullata.AllBul_scaffold_9566                 I 10 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14019  4 -     52922 C----------------------------T---------T---------------T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         13961  4 -     28001 C----------------------------T---------T---------------T
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          4457  4 -     18505 C----------------------------T---------T---------------T
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           5310  4 -     12518 C----------------------------T---------T---------------T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                              2756  4 -     27731 T----------------------------T---------T---------------T
i Alouatta_belzebul.k141_3238538                         C 0 I 8
s Alouatta_caraya.k141_1743867                                2886 13 +      3134 T----------------------------TTTTTTTTTTT---------------T
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               3016  4 -     45847 T----------------------------T---------T---------------T
i Alouatta_discolor.k141_743489                          C 0 I 7
s Alouatta_juara.k141_1509701                                24223  6 +     25266 G-T-T------------------------T---------T---------------T
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_nigerrima.k141_3472759                            17521  4 -     18578 G----------------------------T---------T---------------T
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              2928  4 +     47717 T----------------------------T---------T---------------T
i Alouatta_palliata.k141_2135620                         I 18 C 0
s Alouatta_puruensis.k141_1253230                             3020  4 -      3544 G----------------------------T---------T---------------T
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             14243  6 +     50774 G-T-T------------------------T---------T---------------T
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184426  4 +    412891 A----------------------------T---------T---------------T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 6
s Aotus_azarae.k141_3104676                                  14872  4 -     33861 T----------------------------T---------T---------------T
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            14892  4 -     34016 T----------------------------T---------T---------------T
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297289  4 -   5030052 t----------------------------t---------t---------------t
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             14894  4 -     34685 T----------------------------T---------T---------------T
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28018  4 -     47192 T----------------------------T---------T---------------T
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      11262  2 +     20879 T----------------------------T--------------------------
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       10756  4 +     14667 G----------------------------T---------T---------------T
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3838  4 +     43469 A----------------------------T---------T---------------T
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 1
s Avahi_laniger.k141_765380                                  53145  4 -     92717 T----------------------------T---------C---------------T
i Avahi_laniger.k141_765380                              C 0 I 13
s Avahi_peyrierasi.k141_1424874                              53774  4 +     85213 T----------------------------T---------T---------------C
i Avahi_peyrierasi.k141_1424874                          C 0 I 12
s Callibella_humilis.k141_1278103                             4629  1 -     10423 -------------------------------------------------------T
i Callibella_humilis.k141_1278103                        I 3 C 0
s Callimico_goeldii.k141_1091182                             24103  1 +     31915 -------------------------------------------------------T
i Callimico_goeldii.k141_1091182                         I 2 C 0
s Callithrix_geoffroyi.k119_512088                            4595  1 +      5267 -------------------------------------------------------T
i Callithrix_geoffroyi.k119_512088                       I 3 C 0
s Callithrix_jacchus.pat_scaffold_3                       23589809  1 - 189096842 -------------------------------------------------------T
i Callithrix_jacchus.pat_scaffold_3                      I 3 C 0
s Callithrix_kuhlii.k119_1164682                             11339  1 -     12001 -------------------------------------------------------T
i Callithrix_kuhlii.k119_1164682                         I 3 C 0
s Camelus_bactrianus.KN276810.1                           10001743  4 -  17673402 G----------------------------G---------T---------------T
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334201  4 -   7040546 G----------------------------G---------T---------------T
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  402484  4 -   1652518 G----------------------------G---------T---------------T
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17798528  4 -  60362399 G----------------------------G---------G---------------T
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184585  4 -    185531 G----------------------------G---------G---------------T
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9033971  4 -   9314153 G----------------------------G---------G---------------T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17958236  4 -  59632846 G----------------------------G---------G---------------T
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18499748  4 +  63665305 G----------------------------G---------G---------------T
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007247396.1                           200782  4 +    308752 c----------------------------t---------t---------------t
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                4201  4 -     11696 A----------------------------T---------T---------------T
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 1
s Catagonus_wagneri.CatWag_scaffold_2839                     92358  4 +    217609 G----------------------------T---------G---------------T
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          9254  1 -     11392 -------------------------------------------------------T
i Cebuella_niveiventris.k141_1251222                     I 3 C 0
s Cebuella_pygmaea.k141_1309012                               5352  1 -      7577 -------------------------------------------------------T
i Cebuella_pygmaea.k141_1309012                          I 3 C 0
s Cebus_albifrons.Contig27                                25651403  4 +  26074798 T----------------------------T---------T---------------T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_398305                                  980  4 +      1777 T----------------------------T---------T---------------T
i Cebus_olivaceus.k141_398305                            C 0 I 1
s Cebus_unicolor.k141_544048                                 49313  1 -     74725 -------------------------------------------------------T
i Cebus_unicolor.k141_544048                             I 1 C 0
s Cephalopachus_bancanus.k141_1423433                         4797  4 +     31688 C----------------------------T---------T---------------T
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12230793  1 +  27778364 -------------------------------------------------------T
i Ceratotherium_simum.JH767749.1                         I 2 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1820  1 -     25243 -------------------------------------------------------T
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 2 C 0
s Cercocebus_atys.KQ010504.1                               4474972  4 +   4669795 c----------------------------t---------t---------------t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        13517  4 -     19203 C----------------------------T---------T---------------T
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           7943  4 +      8260 C----------------------------T---------T---------------T
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           8169  4 +     27781 C----------------------------T---------T---------------T
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         8329  4 -     20310 C----------------------------T---------T---------------T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          11308  4 +     29689 C----------------------------T---------T---------------T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            5737  4 +      9989 C----------------------------T---------T---------------T
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          13987  4 -     27936 C----------------------------T---------T---------------T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            2853  4 -     17152 C----------------------------T---------T---------------T
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38816387  4 +  39242232 C----------------------------T---------T---------------T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222082  4 -  21565898 C----------------------------T---------T---------------T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       39200  4 -     53127 C----------------------------T---------T---------------T
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        6468  4 +      7159 C----------------------------T---------T---------------T
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14003  4 -     27947 C----------------------------T---------T---------------T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         13976  4 +     17596 C----------------------------T---------T---------------T
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          3210  4 +     26000 C----------------------------T---------T---------------T
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             20534  1 -     52598 -------------------------------------------------------T
i Cheirogaleus_major.k141_333249                         I 10 C 0
s Cheirogaleus_medius.k141_1055463                           15899  1 +     57038 -------------------------------------------------------T
i Cheirogaleus_medius.k141_1055463                       I 8 C 0
s Chiropotes_albinasus.k141_2813271                          10500  4 +     11226 T----------------------------T---------T---------------T
i Chiropotes_albinasus.k141_2813271                      I 5 C 0
s Chlorocebus_aethiops.ctg25                              18427961  4 -  18827391 C----------------------------T---------T---------------T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       14398  4 -     50209 C----------------------------T---------T---------------T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135421398  4 + 135778131 c----------------------------t---------t---------------t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 17217 28 +     19366 T-TGTG-A-T-TTTTCTTTTCTTTTTTTTT---------T---------------T
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            172317 27 +    839153 t----tgtgatttttctttttttttttt-t---------t---------------t
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1909914  4 +   2368649 C----------------------------T---------T---------------C
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_polykomos.k141_906115                              36452  4 +     84244 C----------------------------T---------T---------------T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17547449  4 -  53390261 A----------------------------A---------G---------------T
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          13663  4 -     20389 G----------------------------T---------G---------------T
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 49504  2 +     63868 T----------------------------T--------------------------
i Cricetomys_gambianus.CriGam_scaffold_18520             I 5 C 0
s Cricetulus_griseus.LT883664.1                           11666983  2 + 224834208 T----------------------------T--------------------------
i Cricetulus_griseus.LT883664.1                          I 4 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               1981  4 -     19598 G----------------------------G---------G---------------T
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27834  5 -     87169 G----------------------------G---------CT--------------T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    836551  2 +   1526836 T----------------------------T--------------------------
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8629216  4 +  20541912 A----------------------------A---------T---------------T
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672644  1 +   1390856 -------------------------------------------------------T
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 2 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    5396  1 +    198055 -------------------------------------------------------T
i Diceros_bicornis.DicBicMic_scaffold_5955               I 2 C 0
s Eidolon_helvum.KE759718.1                                   9872  5 +     11740 A-T-T------------------------T---------T----------------
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1097093  4 +  10337057 T----------------------------G---------T---------------T
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          90480  2 +    110024 T----------------------------T--------------------------
i Ellobius_lutescens.LOEQ01008920.1                      I 8 C 0
s Ellobius_talpinus.LOJH01109367.1                             661  2 +      6299 T----------------------------T--------------------------
i Ellobius_talpinus.LOJH01109367.1                       I 7 C 0
s Enhydra_lutris.KZ291758.1                               16328666  4 -  41312741 G----------------------------G---------A---------------T
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144797  4 -  14770903 A----------------------------T---------T---------------C
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1282705  4 +   4378816 G----------------------------T---------T---------------T
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18530526  4 -  39960074 G----------------------------T---------T---------------T
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               32541  4 +    498745 G----------------------------T---------T---------------T
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21204568  4 -  21539334 C----------------------------T---------T---------------T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13255  5 -     14127 T----------------------------T---------TT--------------T
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                5956  4 -     16928 T----------------------------T---------T---------------T
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              14983  4 -     25546 T----------------------------T---------T---------------T
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12192  4 +     26330 T----------------------------T---------T---------------T
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 13420  4 +     23973 T----------------------------T---------T---------------T
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12189  4 +     75513 T----------------------------T---------T---------------T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10117  4 +     97555 T----------------------------T---------T---------------T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            13046  4 +     26496 T----------------------------T---------T---------------T
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  3656  4 -     17153 T----------------------------T---------T---------------T
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13230  5 +    111500 T----------------------------T---------TT--------------T
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20236331  4 + 206538554 G----------------------------G---------G---------------G
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195174  4 + 205367284 G----------------------------G---------G---------------G
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  8688  4 -     36744 G----------------------------G---------G---------------G
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     425706  4 -    453645 G----------------------------T---------T---------------T
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             3413  4 +     11339 G----------------------------T---------T---------------T
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                             716  4 +     41679 G----------------------------T---------T---------------T
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840                576  4 -      9135 T----------------------------T---------T---------------T
i Galeopterus_variegatus.GalVar_scaffold_108840          I 43 I 11
s Gorilla_beringei.k141_3596273                              15357  4 -     32273 C----------------------------T---------T---------------T
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186337503  4 + 186649187 c----------------------------t---------t---------------t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6304  3 -     19426 -----------------------------T---------T---------------T
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             11453  3 -     15286 -----------------------------T---------T---------------T
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13092  3 +     18253 -----------------------------T---------T---------------T
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13193  3 -     41752 -----------------------------T---------T---------------T
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13031  3 -     16460 -----------------------------T---------T---------------T
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               241668  6 +    327341 G----------------------------G---------TTT-------------T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_596025                 154  4 +       452 T----------------------------T---------C---------------T
i Heterohyrax_brucei.HetBruBak_scaffold_596025           C 0 C 0
s Hoolock_leuconedys.ctg274                                    434170  4 +    630532 C----------------------------T---------T---------------T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  43829  5 +     55795 G----------------------------G---------CT--------------T
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_232023                                1936  4 -     12752 C----------------------------T---------T---------------T
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                               1980  4 +     14092 C----------------------------T---------T---------------T
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189542763  4 - 191637585 C----------------------------T---------T---------------T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3335658  4 -  11177569 C----------------------------T---------T---------------T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7519386  2 -   7955117 t----------------------------t--------------------------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   21974  4 +     31101 T----------------------------T---------T---------------T
i Indri_indri.k141_3655594                               C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    13206  3 -     42476 A----------------------------T---------T----------------
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15523538  4 -  30322482 T----------------------------T---------T---------------T
i Lemur_catta.scaffold_24                                C 0 I 1
s Leontocebus_fuscicollis.k141_1820339                        6881 16 +     64341 T----------------------------T---------GTTT-TTTTT-TTTT-T
i Leontocebus_fuscicollis.k141_1820339                   C 0 I 1
s Leontocebus_illigeri.k141_3350179                           4208 13 +      4941 T----------------------------T---------TTTT-TTTTT-T----T
i Leontocebus_illigeri.k141_3350179                      C 0 I 1
s Leontocebus_nigricollis.k141_4610752                        6924 13 +     35603 T----------------------------T---------TTTT-TTTTT-T----T
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    28401  4 +     38576 T----------------------------T---------T---------------T
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         25098  4 +     66356 T----------------------------T---------T---------------T
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         10420 14 -     23766 T----------------------------T---------TTTT-TTTTT-TT---T
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             28495  1 +     45836 -------------------------------------------------------T
i Lepilemur_dorsalis.k141_577674                         I 9 C 0
s Lepilemur_ruficaudatus.k141_121139                          1034  1 +     25010 -------------------------------------------------------T
i Lepilemur_ruficaudatus.k141_121139                     I 2 C 0
s Lepilemur_septentrionalis.k141_185316                      26422 10 +     54090 T----------------------------T---------TTTT-TTT--------T
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3042205  4 +   3914936 T----------------------------G---------G---------------G
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     5605  2 -     14121 C----------------------------C--------------------------
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1436519  4 +   1826925 C----------------------------T---------T---------------T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5090  4 +     11245 G----------------------------T---------T---------------T
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1003940  4 +   6120653 G----------------------------T---------T---------------T
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4216508  4 -  43346337 t----------------------------t---------t---------------t
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17954476  4 -  59628241 G----------------------------G---------G---------------T
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               6327  4 +     40492 C----------------------------T---------T---------------T
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59675588  4 +  60120075 C----------------------------T---------T---------------T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 12100  4 -     26193 C----------------------------T---------T---------------T
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            79883  4 -    114318 C----------------------------T---------T---------------T
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  5574  4 -     23192 C----------------------------T---------T---------------T
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                15045  4 -     29190 C----------------------------T---------T---------------T
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  23610  4 +     37952 C----------------------------T---------T---------------T
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186838698  4 + 187317192 c----------------------------t---------t---------------t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25457262  4 -  25927173 c----------------------------t---------t---------------t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  79461  4 +     89720 C----------------------------T---------T---------------T
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 6459  4 +     20474 C----------------------------T---------T---------------T
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   6259  4 -     14993 C----------------------------T---------T---------------T
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  329125  4 -    668171 C----------------------------T---------T---------------T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 4574  4 -     24072 C----------------------------T---------T---------------T
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               25198  4 -     45290 C----------------------------T---------T---------------T
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 89957 17 +     94391 A-T-T------------------------T---------TTTT-TTTCT-TTT--T
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23936793  4 -  24302211 C----------------------------T---------T---------------T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               350922  4 +    752769 C----------------------------T---------T---------------T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33101696  2 -  40650429 t----------------------------t--------------------------
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         9679  4 -    207569 G----------------------------T---------T---------------T
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              9383  4 +     13704 G----------------------------G---------G---------------T
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mico_argentatus.k141_1239457                                5169  1 -      7380 -------------------------------------------------------T
i Mico_argentatus.k141_1239457                           I 3 C 0
s Mico_humeralifer.k141_1976199                               4242  1 +     18990 -------------------------------------------------------T
i Mico_humeralifer.k141_1976199                          I 3 C 0
s Mico_schneideri.k141_1950671                                      5181  1 -      7356 -------------------------------------------------------T
i Mico_schneideri.k141_1950671                                 I 3 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 32182  1 +    140813 -----------------------------T--------------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             I 5 C 0
s Mesocricetus_auratus.KB708134.1                         12181666  2 -  29670104 T----------------------------T--------------------------
i Mesocricetus_auratus.KB708134.1                        I 5 C 0
s Microcebus_murinus.CM007674.1                           18290943 14 -  93316391 t----------------------------t---------t-----ttttttttttt
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    20934  4 -    145209 a----------------------------g---------t---------------a
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                14758  3 -     19307 A----------------------------T---------T----------------
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849989  4 +   8254450 A----------------------------T---------G---------------T
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 1
s Miniopterus_schreibersii.MinSch_scaffold_18080             33666  4 +     64694 A----------------------------T---------G---------------T
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 1
s Miopithecus_ogouensis.k141_534055                           8513  4 -     28506 C----------------------------T---------T---------------T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         5073  4 -      8324 G----------------------------G---------G---------------G
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      8492  3 -     37649 T----------------------------T---------T----------------
i Mirza_zaza.k141_952172                                 C 0 I 9
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140704  4 -    366855 A----------------------------T---------T---------------T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   34782  5 +     37127 G----------------------------G---------CT--------------T
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5861  4 +     14753 A----------------------------T---------T---------------C
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84360785  2 - 120012414 T----------------------------T--------------------------
i Mus_caroli.LT608237.1                                  I 5 C 0
s Mus_musculus.chr8                                       87649786  2 - 129401213 t----------------------------t--------------------------
i Mus_musculus.chr8                                      I 6 C 0
s Mus_pahari.LT608297.1                                   31354441  2 -  89631738 T----------------------------T--------------------------
i Mus_pahari.LT608297.1                                  I 5 C 0
s Mus_spretus.CM004101.1                                  90751846  2 - 130317789 t----------------------------t--------------------------
i Mus_spretus.CM004101.1                                 I 6 C 0
s Mustela_putorius.JH418006.1                               300561  4 -  14710649 G----------------------------G---------G---------------T
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                279034  4 -  10118263 A----------------------------T---------T---------------C
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1586727  4 -   6019432 A----------------------------T---------T---------------C
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902799  4 -   4330536 A----------------------------T---------T---------------C
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        33354  4 +     33610 A----------------------------C---------T---------------C
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              188135 15 +    196477 T-TGT-CAAT-TT----T-----------TT--------T---------------T
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nasalis_larvatus.k141_413338                               14508  4 +     21681 C----------------------------T---------T---------------T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306327  4 +  31847680 T----------------------------G---------G---------------G
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9148730  4 -   9404916 G----------------------------G---------G---------------T
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102578919  4 - 196305487 G----------------------------T---------T---------------T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_771082                               764  4 -      2667 G----------------------------T---------T---------------T
i Nycticebus_coucang.k141_771082                         C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749340  4 + 199412804 G----------------------------T---------T---------------T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1362761  2 +   3988456 C----------------------------T--------------------------
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              506012  4 -   2017862 G----------------------------G---------G---------------T
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                    3659  2 -     28053 C----------------------------C--------------------------
i Ondatra_zibethicus.OndZib_scaffold_46174               I 7 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    79574  2 +    102263 T----------------------------T--------------------------
i Onychomys_torridus.OnyTor_scaffold_2986                I 5 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9223  4 -     18566 T----------------------------G---------T---------------T
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67146434  2 + 174332312 C----------------------------C--------------------------
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       461698  4 -    559221 G----------------------------G---------G---------------T
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         3238  4 +      8798 G----------------------------T---------T---------------T
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             695402  4 -   1103335 g----------------------------t---------t---------------t
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    43450  4 +     80009 c----------------------------t---------t---------------t
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189142359  4 + 189151597 c----------------------------t---------t---------------t
i Pan_troglodytes.CM009242.2                             C 0 I 4
s Panthera_onca.PanOnc_flattened_line_3271                  150533  4 +    230217 G----------------------------G---------G---------------G
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                263739  4 +  18783137 G----------------------------G---------G---------------G
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4720377  4 -   8748460 G----------------------------G---------G---------------G
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183442542  4 + 183742232 c----------------------------t---------t---------------t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             6240  4 +     20448 C----------------------------T---------T---------------T
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563048  4 +  20919399 C----------------------------T---------T---------------T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   4984  4 +     41871 C----------------------------T---------T---------------T
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     8269  4 +     27711 C----------------------------T---------T---------------T
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  8347  4 +      9205 C----------------------------T---------T---------------T
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11999  5 -     78924 G----------------------------G---------G---G-----------T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            9386  4 +     13100 G----------------------------T---------T---------------T
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             7788  4 +     25941 G----------------------------T---------T---------------T
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18194193  2 -  18517816 T----------------------------T--------------------------
i Peromyscus_maniculatus.KI615324.1                      I 5 C 0
s Piliocolobus_badius.k141_1234363                           43012  4 +     62158 C----------------------------T---------T---------------T
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        37743  4 +     89929 C----------------------------T---------T---------------T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            39159  4 +     51399 C----------------------------T---------T---------------T
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14295397  4 -  14605196 c----------------------------t---------t---------------t
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1191  4 +     22620 A----------------------------T---------T---------------T
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189130490  4 + 189387572 c----------------------------t---------t---------------t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570098  4 +   9816681 C----------------------------T---------T---------------T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               72681  4 -     81375 C----------------------------T---------T---------------T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              4501  4 +     19060 C----------------------------T---------T---------------T
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 12354  4 -     22811 T----------------------------T---------C---------------T
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2596216  4 -   4620579 t----------------------------t---------t---------------t
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990186  4 +   2598838 t----------------------------t---------t---------------t
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 13
s Propithecus_coronatus.k141_347390                          28496  4 +     38485 T----------------------------T---------T---------------T
i Propithecus_coronatus.k141_347390                      C 0 I 13
s Propithecus_diadema.k141_58108                               541  4 -     13098 T----------------------------T---------T---------------T
i Propithecus_diadema.k141_58108                         C 0 I 11
s Propithecus_edwardsi.k141_1176054                          26017  4 +     35766 T----------------------------T---------T---------------T
i Propithecus_edwardsi.k141_1176054                      C 0 I 13
s Propithecus_perrieri.k141_1200571                           4205  4 -     24134 T----------------------------T---------T---------------T
i Propithecus_perrieri.k141_1200571                      C 0 I 12
s Propithecus_tattersalli.k141_790011                        28027  4 -     67325 T----------------------------T---------T---------------T
i Propithecus_tattersalli.k141_790011                    C 0 I 15
s Propithecus_verreauxi.k141_956661                           4249  7 -      6182 T----------------------------T---------TTT------------CT
i Propithecus_verreauxi.k141_956661                      C 0 I 13
s Psammomys_obesus.NESX01036370.1                             9816  2 -     21651 T----------------------------T--------------------------
i Psammomys_obesus.NESX01036370.1                        I 5 C 0
s Pteronotus_parnellii.KE909381.1                            14046  4 -     21811 A----------------------------T---------T---------------T
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39583  4 +     42204 G----------------------------G---------G---------------T
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22976128  6 +  28871421 a-------------------------tt-t---------t---------------t
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1359214  6 +   4952924 a-------------------------tt-t---------t---------------t
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20273687  4 -  38429054 G----------------------------G---------G---------------G
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             14508  4 -     91421 C----------------------------T---------T---------------T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7608631  4 +   7812017 C----------------------------T---------T---------------T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             14479  4 -     72585 C----------------------------T---------T---------------T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53570059  2 +  90668790 T----------------------------T--------------------------
i Rattus_norvegicus.chr16                                I 5 C 0
s Rhinopithecus_bieti.k119_217274                             6196  4 -     11128 C----------------------------T---------T---------------T
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91235552  4 - 195417433 C----------------------------T---------T---------------T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7671201  4 +   7961872 C----------------------------T---------T---------------T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87146  9 -     96226 A-T-T------------------------T---------TTTT------------T
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               7563  4 -      8359 T----------------------------T---------T---------------T
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_imperator.k141_2524406                             1516 19 +      2197 T----------------------------T---------TTTTGTTTTTGTTTTTT
i Saguinus_imperator.k141_2524406                        C 0 C 0
s Saguinus_inustus.k141_699149                               12948  1 +     13640 -------------------------------------------------------T
i Saguinus_inustus.k141_699149                           I 9 C 0
s Saguinus_labiatus.k141_285685                               7803 15 +      8564 T----------------------------T---------TTTT-TTTTT-TTT--T
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209468638  4 + 209938924 T----------------------------T---------T---------------T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 7365 11 -      9399 T----------------------------T---------TTTTGTTT--------T
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119950293  4 - 121099817 c----------------------------t---------t---------------t
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       22749  4 +     46362 T----------------------------T---------T---------------T
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               22844  4 +     45824 C----------------------------T---------T---------------T
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             39472  4 -     64574 T----------------------------T---------T---------------T
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               2478  4 -     23631 C----------------------------T---------T---------------T
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 22740  4 -     61129 T----------------------------T---------T---------------T
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420068  4 -   5703754 T----------------------------T---------T---------------T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          55109  4 -     80660 T----------------------------T---------T---------------T
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    152516  4 -    313613 A----------------------------A---------G---------------T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          19020  4 -     19888 C----------------------------T---------T---------------T
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26223  4 +     39453 C----------------------------T---------T---------------T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            6742  4 +     27826 C----------------------------T---------T---------------T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             6263  4 -     19483 C----------------------------T---------T---------------T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      6331  4 +      7198 C----------------------------T---------T---------------T
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         14589  4 +     15514 C----------------------------T---------T---------------T
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11342  1 -     12148 -----------------------------T--------------------------
i Sigmodon_hispidus.SigHis_scaffold_60841                I 5 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               3150  4 +   1910179 G----------------------------G---------G---------------T
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13650030  9 -  18376816 g----------------------------g---------g----------atttat
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1952580  2 -   3870691 t----------------------------t--------------------------
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30086  3 +     97271 -----------------------------G---------G---------------C
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              17668  5 -    196729 G----------------------------G---------CT--------------T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6809844  4 +  69701581 G----------------------------T---------A---------------T
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1092805  4 -   1523678 C----------------------------T---------T---------------T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 9955  4 +     41958 A----------------------------T---------T---------------T
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 71490 14 +    116680 T-TGT-CAAT-TT----T-----------T---------T---------------T
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118116  4 -    156842 G----------------------------T---------T---------------T
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 1
s Tapirus_terrestris.TapTer_scaffold_755                    386569  4 +    539355 G----------------------------T---------G---------------T
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 1
s Tarsius_lariang.k141_2201908                               25790 18 +     70052 C-T-T----T-------------------T---------TTTT-TTTTT-TTT--T
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                 625 15 -     16117 C----------------------------T---------TTTT-TTTTT-TTT--T
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186427912  4 + 186847797 c----------------------------t---------t---------------t
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     80288  4 +    610378 T----------------------------T---------T---------------C
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         10314  4 -     20410 C----------------------------T---------T---------------T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    14508  4 +     15221 C----------------------------T---------T---------------T
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                       10415  4 +     19930 C----------------------------T---------T---------------T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       6842  4 -     19997 C----------------------------T---------T---------------T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            46966  4 -     60166 C----------------------------T---------T---------------T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        14437  4 -     27529 C----------------------------T---------T---------------T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     14381  4 -     18194 C----------------------------T---------T---------------T
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           8109  4 -     21137 C----------------------------T---------T---------------T
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    6812  4 -     10723 C----------------------------T---------T---------------T
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         5968  4 +      9834 C----------------------------T---------T---------------T
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        24281  4 +     32220 C----------------------------T---------T---------------T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5938383  4 +   6242583 C----------------------------T---------T---------------T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        7635  4 +     20839 C----------------------------T---------T---------------T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2155038  4 +   4065304 C----------------------------T---------T---------------C
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     8686  4 -     10553 C----------------------------T---------T---------------C
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   52688  4 -     77625 A----------------------------A---------A---------------T
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4849788  4 -   5085361 G----------------------------G---------G---------------T
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  10875  4 +     50397 T----------------------------T---------T---------------T
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             10934  4 +     24756 T----------------------------T---------T---------------T
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371229  4 -   5488506 G----------------------------T---------T---------------T
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10143  4 -     43706 G----------------------------G---------G---------------T
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        23784  2 -     24430 T----------------------------T--------------------------
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          4520  4 +     86975 G----------------------------G---------G---------------T
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      14347 29 +     63895 TATGTGGAATATTGACATTTAACGCCTT-T--------------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 10 C 0
e Echinops_telfairi.JH980293.1                            48779651 164 + 111700974 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   3761  0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Nannospalax_galili.KL204047.1                            2033264 25 -   3037898 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50341  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352  0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Daubentonia_madagascariensis.ctg71                      12536759  0 -  12879189 C
e Dasypus_novemcinctus.JH564415.1                            62473  5 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Colobus_guereza.LG01                                   199948958  0 + 200372422 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_713168             206  0 -      2554 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    136758  0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6106  4 +     62944 T----------T----------------TT
s Acinonyx_jubatus.LLWD01001279.1                           826684  3 -   1699592 -----------T----------------TT
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     69923  1 +     87051 -----------------------------T
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 92 I 47
s Ailuropoda_melanoleuca.LNAT01000098.1                    9509932  3 -  29979442 -----------T----------------TT
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             78703  3 -    347723 -----------T----------------TT
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     74066  1 -     89534 -----------------------------T
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14023  4 -     52922 T----------T----------------TC
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         13965  4 -     28001 T----------T----------------TC
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          4461  4 -     18505 T----------T----------------TC
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           5314  4 -     12518 T----------T----------------TC
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                              2768  4 -     27731 T----------T----------------TT
i Alouatta_belzebul.k141_3238538                         I 8 C 0
s Alouatta_caraya.k141_1743867                                2899  4 +      3134 T----------T----------------TT
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               3027  4 -     45847 T----------T----------------TT
i Alouatta_discolor.k141_743489                          I 7 C 0
s Alouatta_juara.k141_1509701                                24229 12 +     25266 T----------TTTT-TTTT-G------TT
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_nigerrima.k141_3472759                            17525  4 -     18578 T----------T----------------TT
i Alouatta_nigerrima.k141_3472759                        C 0 I 8
s Alouatta_palliata.k141_2135620                              2932  4 +     47717 T----------T----------------TT
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             3024 12 -      3544 T----------TTTT-T----GTT---GTT
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             14249 11 +     50774 T----------TTTT-TTT--G------TT
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184436  5 +    412891 -----------TTT--------------CT
i Anoura_caudifer.AnoCau_scaffold_1412                   I 6 C 0
s Aotus_azarae.k141_3104676                                  14876  4 -     33861 T----------T----------------TT
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            14896  4 -     34016 T----------T----------------TT
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297293  4 -   5030052 t----------t----------------tt
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             14898  4 -     34685 T----------T----------------TT
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28022  4 -     47192 T----------T----------------TT
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      11264  1 +     20879 -----------------------------T
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       10760  4 +     14667 T----------T----------------CT
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3843  5 +     43469 -----------TTT--------------CT
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 1 C 0
s Avahi_laniger.k141_765380                                  53162  1 -     92717 T-----------------------------
i Avahi_laniger.k141_765380                              I 13 C 0
s Callibella_humilis.k141_1278103                             4630  4 -     10423 T----------T----------------TT
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             24104  4 +     31915 T----------T----------------TT
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            4596  4 +      5267 T----------T----------------TT
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23589810  4 - 189096842 T----------T----------------TT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             11340  4 -     12001 T----------T----------------TT
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10001747  3 -  17673402 -----------T----------------TT
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334205  3 -   7040546 -----------T----------------TT
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  402488  3 -   1652518 -----------T----------------TT
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17798532  3 -  60362399 -----------T----------------TT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184589  3 -    185531 -----------T----------------TT
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9033975  3 -   9314153 -----------T----------------TT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17958240  3 -  59632846 -----------T----------------TT
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18499752  3 +  63665305 -----------T----------------TT
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007247396.1                           200786  4 +    308752 t----------g----------------tt
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                4206  5 -     11696 -----------TTT--------------CT
i Carollia_perspicillata.CarPer_scaffold_92756           I 1 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     92362  3 +    217609 -----------T----------------TT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          9255  4 -     11392 T----------T----------------TT
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               5353  4 -      7577 T----------T----------------TT
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25651407  2 +  26074798 T----------T------------------
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1000828                                2727  4 -      2944 T----------T----------------TT
i Cebus_olivaceus.k141_1000828                           I 62 I 96
s Cebus_unicolor.k141_544048                                 49314  4 -     74725 T----------T----------------TT
i Cebus_unicolor.k141_544048                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         4801  4 +     31688 T----------G----------------TT
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12230794  3 +  27778364 -----------T----------------TT
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1821  3 -     25243 -----------T----------------TT
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4474976  4 +   4669795 t----------t----------------tc
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        13521  4 -     19203 T----------T----------------TC
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           7947  4 +      8260 T----------T----------------TC
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           8173  4 +     27781 T----------T----------------TC
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         8333  4 -     20310 T----------T----------------TC
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          11312  4 +     29689 T----------T----------------TC
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            5741  4 +      9989 T----------T----------------TC
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          13991  4 -     27936 T----------T----------------TC
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            2857  4 -     17152 T----------T----------------TC
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38816391  4 +  39242232 T----------T----------------TC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222086  4 -  21565898 T----------T----------------TC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       39204  4 -     53127 T----------T----------------TC
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        6472  4 +      7159 T----------T----------------TC
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14007  4 -     27947 T----------T----------------TC
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         13980  4 +     17596 T----------T----------------TC
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          3214  4 +     26000 T----------T----------------TC
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Cheirogaleus_major.k141_333249                             20535  4 -     52598 T----------T----------------CT
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           15900  4 +     57038 T----------T----------------CT
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                          10504 14 +     11226 TTTTTTTTTTTT----------------TT
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18427965  4 -  18827391 T----------T----------------TC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       14402  4 -     50209 T----------T----------------TC
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135421402  4 + 135778131 t----------t----------------tc
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 17245  3 +     19366 -----------T----------------TT
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            172344  3 +    839153 -----------t----------------tt
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1909918  4 +   2368649 T----------T----------------TC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_polykomos.k141_906115                              36456  4 +     84244 T----------T----------------TC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17547453  3 -  53390261 -----------T----------------TT
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          13667  3 -     20389 -----------T----------------TT
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 49506  1 +     63868 -----------------------------T
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11666985  1 + 224834208 -----------------------------T
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               1985  3 -     19598 -----------T----------------TT
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27839  2 -     87169 -----------T----------------T-
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    836553  1 +   1526836 -----------------------------T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12536759  4 -  12879189 T----------T----------------TT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8629220  5 +  20541912 -----------TTT--------------CT
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672645  3 +   1390856 -----------T----------------TT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    5397  3 +    198055 -----------T----------------TT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE759718.1                                   9877  3 +     11740 -----------T----------------TT
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1097097  3 +  10337057 -----------T----------------TC
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          90482  1 +    110024 -----------------------------T
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01109367.1                             663  1 +      6299 -----------------------------T
i Ellobius_talpinus.LOJH01109367.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16328670  3 -  41312741 -----------T----------------TT
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144801  3 -  14770903 -----------T----------------TT
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1282709  3 +   4378816 -----------T----------------TT
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18530530  3 -  39960074 -----------T----------------TT
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               32545  3 +    498745 -----------T----------------TT
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21204572  4 -  21539334 T----------T----------------TC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13260  4 -     14127 T----------T----------------TT
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                5960  4 -     16928 T----------T----------------TT
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              14987  4 -     25546 T----------T----------------TT
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12196  4 +     26330 T----------T----------------TT
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 13424  4 +     23973 T----------T----------------TT
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12193  4 +     75513 T----------T----------------TT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10121  2 +     97555 T----------T------------------
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            13050  4 +     26496 T----------T----------------TT
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  3660  4 -     17153 T----------T----------------TT
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13235  4 +    111500 T----------T----------------TT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20236335  3 + 206538554 -----------T----------------TT
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195178  3 + 205367284 -----------T----------------TT
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  8692  3 -     36744 -----------T----------------TT
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     425710  4 -    453645 T----------T----------------CT
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             3417  4 +     11339 T----------T----------------CT
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                             720  4 +     41679 T----------T----------------CT
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840                591  4 -      9135 T----------T----------------TT
i Galeopterus_variegatus.GalVar_scaffold_108840          I 11 C 0
s Gorilla_beringei.k141_3596273                              15361  4 -     32273 T----------T----------------TT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186337507  4 + 186649187 t----------t----------------tt
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6307  4 -     19426 T----------T----------------AT
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             11456  4 -     15286 T----------T----------------AT
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13095  4 +     18253 T----------T----------------AT
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13196  4 -     41752 T----------T----------------AT
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13034  3 -     16460 -----------T----------------AT
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               241674  2 +    327341 -----------T----------------T-
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_596025                 158  3 +       452 -----------T----------------TT
i Heterohyrax_brucei.HetBruBak_scaffold_596025           C 0 C 0
s Hoolock_leuconedys.ctg274                                    434174  4 +    630532 T----------T----------------TT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  43834  2 +     55795 -----------T----------------T-
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_232023                                1940  4 -     12752 T----------T----------------TT
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                               1984  4 +     14092 T----------T----------------TT
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189542767  4 - 191637585 T----------T----------------TT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3335662  4 -  11177569 T----------T----------------TT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7519388  1 -   7955117 -----------------------------t
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   21978  4 +     31101 T----------T----------------TT
i Indri_indri.k141_3655594                               C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    13209  3 -     42476 -----------T----------------TT
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15523543  3 -  30322482 -----------T----------------AT
i Lemur_catta.scaffold_24                                I 1 C 0
s Leontocebus_fuscicollis.k141_1820339                        6898  1 +     64341 -----------------------------T
i Leontocebus_fuscicollis.k141_1820339                   I 1 C 0
s Leontocebus_illigeri.k141_3350179                           4222  1 +      4941 -----------------------------T
i Leontocebus_illigeri.k141_3350179                      I 1 C 0
s Leontocebus_nigricollis.k141_4610752                        6937  4 +     35603 T----------T----------------TT
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    28405  4 +     38576 T----------T----------------TT
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         25102  4 +     66356 T----------T----------------TT
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         10434  4 -     23766 T----------T----------------TT
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             28496  4 +     45836 T----------T----------------TT
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1035  4 +     25010 T----------T----------------TT
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      26432  4 +     54090 T----------T----------------TT
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3042209  3 +   3914936 -----------T----------------TT
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                              1436523  4 +   1826925 T----------T----------------TC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5094  4 +     11245 T----------T----------------CT
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1003944  4 +   6120653 T----------T----------------CT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4216512  3 -  43346337 -----------a----------------tt
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17954480  3 -  59628241 -----------T----------------TT
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               6331  4 +     40492 T----------T----------------TC
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59675592  4 +  60120075 T----------T----------------TC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 12104  4 -     26193 T----------T----------------TC
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            79887  4 -    114318 T----------T----------------TC
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  5578  4 -     23192 T----------T----------------TC
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                15049  4 -     29190 T----------T----------------TC
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  23614  4 +     37952 T----------T----------------TC
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186838702  4 + 187317192 t----------t----------------tc
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25457266  4 -  25927173 t----------t----------------tc
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  79465  4 +     89720 T----------T----------------TC
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 6463  4 +     20474 T----------T----------------TC
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   6263  4 -     14993 T----------T----------------TC
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  329129  4 -    668171 T----------T----------------TC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 4578  4 -     24072 T----------T----------------TC
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               25202  4 -     45290 T----------T----------------TC
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 89974  3 +     94391 -----------T----------------TT
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23936797  4 -  24302211 T----------T----------------TC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               350926  4 +    752769 T----------T----------------TC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33101698  1 -  40650429 -----------------------------t
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         9683  3 -    207569 -----------T----------------CT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              9387  3 +     13704 -----------T----------------TT
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 32183  1 +    140813 -----------------------------C
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12181668  1 -  29670104 -----------------------------T
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                5170  4 -      7380 T----------T----------------TT
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               4243  4 +     18990 T----------T----------------TT
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      5182  4 -      7356 T----------T----------------TT
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18290957  4 -  93316391 t----------t----------------tt
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    20938  3 -    145209 -----------t----------------tt
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 603
s Micronycteris_hirsuta.MicHir_scaffold_52381                14761  5 -     19307 -----------TTT--------------CT
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1849994  3 +   8254450 -----------T----------------GT
i Miniopterus_natalensis.LDJU01000034.1                  I 1 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             33671  3 +     64694 -----------T----------------GT
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 1 C 0
s Miopithecus_ogouensis.k141_534055                           8517  4 -     28506 T----------T----------------TC
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         5077  3 -      8324 -----------T----------------TT
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      8504  1 -     37649 -----------------------------T
i Mirza_zaza.k141_952172                                 I 9 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140708  3 -    366855 -----------T----------------CT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 2
s Mungos_mungo.MunMun_flattened_line_23663                   34787  2 +     37127 -----------T----------------T-
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5865  3 +     14753 -----------T----------------TT
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84360787  1 - 120012414 -----------------------------C
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87649788  1 - 129401213 -----------------------------c
i Mus_musculus.chr8                                      C 0 I 19
s Mus_pahari.LT608297.1                                   31354443  1 -  89631738 -----------------------------C
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90751848  1 - 130317789 -----------------------------c
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               300565  3 -  14710649 -----------T----------------TT
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                279038  3 -  10118263 -----------T----------------TT
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1586731  3 -   6019432 -----------T----------------TT
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902803  3 -   4330536 -----------T----------------TT
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        33358  3 +     33610 -----------T----------------TT
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              188150  3 +    196477 -----------T----------------TT
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nasalis_larvatus.k141_413338                               14512  4 +     21681 T----------T----------------TC
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306331  3 +  31847680 -----------T----------------TT
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9148734  3 -   9404916 -----------T----------------TT
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102578923  4 - 196305487 T----------T----------------CT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_771082                               768  4 -      2667 T----------T----------------CT
i Nycticebus_coucang.k141_771082                         C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749344  4 + 199412804 T----------T----------------CT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                              506016  3 -   2017862 -----------T----------------TT
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                    3661  1 -     28053 -----------------------------C
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    79576  1 +    102263 -----------------------------A
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9227  3 -     18566 -----------T----------------TT
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       461702  3 -    559221 -----------T----------------TT
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         3242  4 +      8798 T----------T----------------CT
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             695406  4 -   1103335 t----------t----------------ct
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    43454  4 +     80009 t----------t----------------tt
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03001836.1                             29379  4 +     51860 t----------t----------------tt
i Pan_troglodytes.NBAG03001836.1                         I 64 I 51
s Panthera_onca.PanOnc_flattened_line_3271                  150537  3 +    230217 -----------T----------------TT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                263743  3 +  18783137 -----------T----------------TT
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4720381  3 -   8748460 -----------T----------------TT
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183442546  4 + 183742232 t----------t----------------tc
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             6244  4 +     20448 T----------T----------------TC
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563052  4 +  20919399 T----------T----------------TC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   4988  4 +     41871 T----------T----------------TC
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     8273  4 +     27711 T----------T----------------TC
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  8351  4 +      9205 T----------T----------------TC
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12004  3 -     78924 -----------T----------------TT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            9390  4 +     13100 T----------T----------------CT
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             7792  4 +     25941 T----------T----------------CT
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18194195  1 -  18517816 -----------------------------T
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Piliocolobus_badius.k141_1234363                           43016  4 +     62158 T----------T----------------TC
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        37747  4 +     89929 T----------T----------------TC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            39163  4 +     51399 T----------T----------------TC
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14295401  4 -  14605196 t----------t----------------tt
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1195  3 +     22620 -----------T----------------TT
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189130494  4 + 189387572 t----------t----------------tt
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570102  4 +   9816681 T----------T----------------TT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               72685  4 -     81375 T----------T----------------TC
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              4505  4 +     19060 T----------T----------------TC
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 12358  3 -     22811 -----------T----------------TT
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2596220  4 -   4620579 t----------t----------------at
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990203  4 +   2598838 t----------t----------------tt
i Propithecus_coquerelli.NW_012148875.1                  I 13 C 0
s Propithecus_coronatus.k141_347390                          28513  4 +     38485 T----------T----------------TT
i Propithecus_coronatus.k141_347390                      I 13 C 0
s Propithecus_diadema.k141_58108                               556  4 -     13098 T----------T----------------TT
i Propithecus_diadema.k141_58108                         I 11 C 0
s Propithecus_edwardsi.k141_1176054                          26034  4 +     35766 T----------T----------------TT
i Propithecus_edwardsi.k141_1176054                      I 13 C 0
s Propithecus_perrieri.k141_1200571                           4221  4 -     24134 T----------T----------------TT
i Propithecus_perrieri.k141_1200571                      I 12 C 0
s Propithecus_tattersalli.k141_790011                        28046  4 -     67325 T----------T----------------TT
i Propithecus_tattersalli.k141_790011                    I 15 C 0
s Propithecus_verreauxi.k141_956661                           4269  4 -      6182 T----------T----------------TT
i Propithecus_verreauxi.k141_956661                      I 13 C 0
s Psammomys_obesus.NESX01036370.1                             9818  1 -     21651 -----------------------------C
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            14050  3 -     21811 -----------T----------------CT
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39587  3 +     42204 -----------T----------------TT
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22976134  3 +  28871421 -----------t----------------tt
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1359220  3 +   4952924 -----------t----------------tt
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20273691  3 -  38429054 -----------T----------------TT
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             14512  4 -     91421 T----------T----------------TC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7608635  4 +   7812017 T----------T----------------TC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             14483  4 -     72585 T----------T----------------TC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53570061  1 +  90668790 -----------------------------C
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             6200  4 -     11128 T----------T----------------TC
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91235556  4 - 195417433 T----------T----------------TC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7671205  4 +   7961872 T----------T----------------TC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87155  3 -     96226 -----------T----------------TT
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               7567  4 -      8359 T----------T----------------TT
i Saguinus_bicolor.k141_2619299                          C 0 I 9
s Saguinus_imperator.k141_2524406                             1535  4 +      2197 T----------T----------------TT
i Saguinus_imperator.k141_2524406                        C 0 C 0
s Saguinus_inustus.k141_699149                               12949  4 +     13640 T----------T----------------TT
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               7818  4 +      8564 T----------T----------------TT
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209468642 20 + 209938924 T----------TTTTGTTTTTGTTTTTGTT
i Saguinus_midas.LG03                                    C 0 I 9
s Saguinus_mystax.k141_374627                                 7376  4 -      9399 T----------T----------------TT
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119950297  4 - 121099817 t----------t----------------tt
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       22753  4 +     46362 T----------T----------------TT
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               22848  4 +     45824 T----------T----------------TT
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             39476  4 -     64574 T----------T----------------TT
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               2482  4 -     23631 T----------T----------------TT
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 22744  4 -     61129 T----------T----------------TT
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420072  4 -   5703754 T----------T----------------TT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          55113  4 -     80660 T----------T----------------TT
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    152520  3 -    313613 -----------T----------------TT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          19024  4 -     19888 T----------T----------------TC
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26227  4 +     39453 T----------T----------------TC
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            6746  4 +     27826 T----------T----------------TC
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             6267  4 -     19483 T----------T----------------TC
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      6335  4 +      7198 T----------T----------------TC
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         14593  4 +     15514 T----------T----------------TC
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11343  1 -     12148 -----------------------------T
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               3154  3 +   1910179 -----------T----------------TT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13650039  3 -  18376816 -----------t----------------tt
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1952582  1 -   3870691 -----------------------------t
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30089  3 +     97271 -----------T----------------TT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              17673  2 -    196729 -----------T----------------T-
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6809848  3 +  69701581 -----------T----------------TT
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1092809  4 -   1523678 T----------T----------------TT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 9959  3 +     41958 -----------T----------------TT
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 71504  3 +    116680 -----------T----------------TT
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118121  3 -    156842 -----------T----------------TT
i Tapirus_indicus.TapInd_scaffold_9301                   I 1 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    386574  3 +    539355 -----------T----------------TT
i Tapirus_terrestris.TapTer_scaffold_755                 I 1 C 0
s Tarsius_lariang.k141_2201908                               25808  4 +     70052 T----------T----------------TT
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                 640  4 -     16117 T----------T----------------TT
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186427916  4 + 186847797 t----------t----------------tc
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     80292  5 +    610378 -----------TTT--------------CT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         10318  4 -     20410 T----------T----------------TC
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    14512  4 +     15221 T----------T----------------TC
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                       10419  4 +     19930 T----------T----------------TC
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       6846  4 -     19997 T----------T----------------TC
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            46970  4 -     60166 T----------T----------------TC
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        14441  4 -     27529 T----------T----------------TC
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     14385  4 -     18194 T----------T----------------TC
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           8113  4 -     21137 T----------T----------------TC
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    6816  4 -     10723 T----------T----------------TC
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         5972  4 +      9834 T----------T----------------TC
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        24285  4 +     32220 T----------T----------------TC
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5938387  4 +   6242583 T----------T----------------TC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        7639  4 +     20839 T----------T----------------TC
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2155042  3 +   4065304 -----------T----------------TT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     8690  3 -     10553 -----------T----------------TT
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   52692  3 -     77625 -----------T----------------TT
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4849792  3 -   5085361 -----------T----------------TT
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  10879  4 +     50397 T----------T----------------TT
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             10938  4 +     24756 T----------T----------------TT
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371233  3 -   5488506 -----------T----------------TT
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10147  3 -     43706 -----------T----------------TT
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        23786  1 -     24430 -----------------------------T
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          4524  3 +     86975 -----------T----------------TT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      14376  1 +     63895 -----------------------------T
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Echinops_telfairi.JH980293.1                            48779651 164 + 111700974 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   3761  0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Oryctolagus_cuniculus.CM000791.1                        67146436  0 + 174332312 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1362763  0 +   3988456 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Nannospalax_galili.KL204047.1                            2033264 25 -   3037898 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50341  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352  0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     5607  0 -     14121 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            62473  5 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Colobus_guereza.LG01                                   199948958  0 + 200372422 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_713168             206  0 -      2554 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    136758  0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              53778 12 +     85213 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6110 17 +     62944 GCCTTTGT------TA---TGTT-TCC
s Acinonyx_jubatus.LLWD01001279.1                           826687 19 -   1699592 TCCCTTAT------TACA-TGTT-TCC
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_11939                     24747 18 -     89785 -CCTTTGC------TACA-TTTT-TAC
i Acomys_cahirinus.AcoCah_scaffold_11939                 I 1 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9509935 19 -  29979442 GCCCTTGC------TACA-TGTT-TCC
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             78706 19 -    347723 GCTTTTGC------CTCA-TGTT-TTC
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     74067 19 -     89534 GATTTTGC------TATA-TGAT-TCC
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14027 17 -     52922 GCCTTTGT------TA---TGTT-TCC
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         13969 17 -     28001 GCCTTTGT------TA---TGTT-TCC
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          4465 17 -     18505 GCCTTTGT------TA---TGTT-TCC
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           5318 17 -     12518 GCCTTTGT------TA---TGTT-TCC
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                              2772 17 -     27731 GCCTTTGT------TA---TGTT-TCC
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                2903 17 +      3134 GCCTTTGT------TA---TGTT-TCC
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               3031 17 -     45847 GCCTTTGT------TA---TGTT-TCC
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                24241 17 +     25266 GCCTTTGT------TA---TGTT-TCC
i Alouatta_juara.k141_1509701                            C 0 I 33
s Alouatta_nigerrima.k141_3472759                            17537 17 -     18578 GCCTTTGT------TA---TGTT-TCC
i Alouatta_nigerrima.k141_3472759                        I 8 C 0
s Alouatta_palliata.k141_2135620                              2936 17 +     47717 GCCTTTGT------TA---TGTT-TCC
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             3036 17 -      3544 GCCTTTGT------TA---TGTT-TCC
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             14260 17 +     50774 GCCTTTGT------TA---TGTT-TCC
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184441 20 +    412891 GCCATTGC------TATA-TGTTTTTC
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 11
s Aotus_azarae.k141_3104676                                  14880 17 -     33861 GCCTTTGT------TA---TGTT-TCC
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            14900 17 -     34016 GCCTTTGT------TA---TGTT-TCC
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297297 17 -   5030052 gcctttgt------ta---tGTT-TCC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             14902 17 -     34685 GCCTTTGT------TA---TGTT-TCC
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28026 17 -     47192 GCCTTTGT------TA---TGTT-TCC
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      11265 19 +     20879 TCTTTTGC------TACA-AGTT-TCC
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       10764 19 +     14667 GCCCTTGC------TA-CCTATT-TAC
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3848 20 +     43469 GCCATTGC------TGTA-TGTTTTTT
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 11
s Avahi_laniger.k141_765380                                  53163 17 -     92717 --CCCCGT------TACA-TATT-TCC
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              53790 17 +     85213 --CCCTGT------TACA-TATT-TCC
i Avahi_peyrierasi.k141_1424874                          I 12 C 0
s Callibella_humilis.k141_1278103                             4634 17 -     10423 GCCTTTGT------TA---TGTT-TCC
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             24108 17 +     31915 GCCTTTGT------TA---TGTT-TCC
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            4600 17 +      5267 GCCTTTGT------TA---TGTT-TCC
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23589814 17 - 189096842 GCCTTTGT------TA---TGTT-TCC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             11344 17 -     12001 GCCTTTGT------TA---TGTT-TCC
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10001750 19 -  17673402 GCCTTTGC------TATA-TGTT-TCC
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334208 19 -   7040546 GCCTTTGC------TATA-TGTT-TCC
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  402491 19 -   1652518 GCCTTTGC------TATA-TGTT-TCC
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17798535 19 -  60362399 GCTCTTGC------TATA-TGTT-TCC
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184592 19 -    185531 GCTCTTGC------TATA-TGTT-TCC
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9033978 19 -   9314153 GCTCTTGC------TATA-TGTT-TCC
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17958243 19 -  59632846 GCTCTTGC------TATA-TGTT-TCC
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18499755 19 +  63665305 GCTCTTGC------TATA-TGTT-TCC
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007247396.1                           200790 19 +    308752 gcctttgc------TA-CGTGTT-TCC
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                4211 20 -     11696 GCCATTGC------TGTA-TGTTTTTT
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 11
s Catagonus_wagneri.CatWag_scaffold_2839                     92365 19 +    217609 GCCTTTGC------TATA-TGCT-TCC
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          9259 17 -     11392 GCCTTTGT------TA---TGTT-TCC
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               5357 17 -      7577 GCCTTTGT------TA---TGTT-TCC
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25651409 17 +  26074798 GCATTTGT------TA---TGTT-TCC
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_398305                                  985 17 +      1777 GCATTTGT------TA---TGTT-TCC
i Cebus_olivaceus.k141_398305                            I 1 C 0
s Cebus_unicolor.k141_544048                                 49318 17 -     74725 GCATTTGT------TA---TGTT-TCC
i Cebus_unicolor.k141_544048                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         4805 19 +     31688 GCCTTTGC------TACA-TGTC-TCC
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12230797 19 +  27778364 GCCTTTGC------TATA-TGCT-TCC
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1824 19 -     25243 GCCTTTGC------TATA-TGCT-TCC
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4474980 17 +   4669795 GCCTTTGT------TA---TGTT-TCC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        13525 17 -     19203 GCCTTTGT------TA---TGTT-TCC
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           7951 17 +      8260 GCCTTTGT------TG---TGTT-TCC
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           8177 17 +     27781 GCCTTTGT------TA---TGTT-TCC
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         8337 17 -     20310 GCTTTTGT------TA---TGTT-TCC
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          11316 17 +     29689 GCTTTTGT------TA---TGTT-TCC
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            5745 17 +      9989 ACCTTTGT------TA---TGTT-TCC
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          13995 17 -     27936 GCCTTTGT------TA---TGTT-TCC
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            2861 17 -     17152 GCCTTTGT------TA---TGTT-TCC
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38816395 17 +  39242232 GCTTTTGT------TA---TGTT-TCC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222090 17 -  21565898 GCCTTTGT------TA---TGTT-TCC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       39208 17 -     53127 GCCTTTGT------TA---TGTT-TCC
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        6476 17 +      7159 GCTTTTGT------TA---TGTT-TCC
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14011 17 -     27947 GCTTTTGT------TA---TGTT-TCC
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         13984 17 +     17596 GCCTTTGT------TA---TGTT-TCC
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          3218 17 +     26000 GCCTTTGT------TA---TGTT-TCC
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_713168             206  3 -      2554 ------------------------tcc
i Chaetophractus_vellerosus.ChaVel_scaffold_713168       C 0 I 1
s Cheirogaleus_major.k141_333249                             20539 19 -     52598 GCCCTTGC------TACA-TATT-TCC
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           15904 19 +     57038 GCCCTTGC------TACA-TATT-TCC
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                          10518 16 +     11226 GCCTTTGT------GA---T-TT-TCC
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18427969 17 -  18827391 GCCTTTGT------TA---TGTT-TCC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       14406 17 -     50209 GCCTTTGT------TA---TGTT-TCC
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135421406 17 + 135778131 GCCTTTGT------TA---TGTT-TCC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 17248 10 +     19366 GCCTTTGC------TA-----------
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 I 10
s Choloepus_hoffmanni.KN194906.1                            172347 10 +    839153 gcctttgc------ta-----------
i Choloepus_hoffmanni.KN194906.1                         C 0 I 8
s Colobus_angolensis.KN981557.1                            1909922 17 +   2368649 GCCTTTGT------TA---TGTT-TCC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_polykomos.k141_906115                              36460 17 +     84244 ACCTTTGT------TA---TGTT-TCC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17547456 19 -  53390261 CCCTTTGC------TACA-TGTT-TCT
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          13670 19 -     20389 GCCTCTGC------TACA-TGTT-TCT
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 49507 19 +     63868 CTCTTTGC------TACA-TGTT-TCC
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11666986 19 + 224834208 CCTTTTGC------TACA-TGTA-TCC
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               1988 19 -     19598 GCCTTTAG------AGTA-TGTT-TTT
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 I 392
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27841 19 -     87169 ACCCTTGT------TACA-TCTT-TCC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    836554 19 +   1526836 TTCTATGT------CATA-TATT-TTT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12536763 19 -  12879189 TCCCTTGC------TACA-TATT-TCC
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8629225 20 +  20541912 GCCACTGC------TGTA-TGTTTTTC
i Desmodus_rotundus.KZ672289.1                           C 0 I 11
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672648 19 +   1390856 GCCTTTGC------TATA-TGCT-TCC
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    5400 19 +    198055 GCCTTTGC------TATA-TGCT-TCC
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Echinops_telfairi.JH980293.1                            48779815  7 + 111700974 -------------------TGTT-TCC
i Echinops_telfairi.JH980293.1                           I 164 I 1
s Eidolon_helvum.KE759718.1                                   9880 19 +     11740 GCCAGTGC------TATA-TGTT-TCC
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1097100 19 +  10337057 TCCCTTGC------TATA-TTTT-TCC
i Elephantulus_edwardii.JH947257.1                       C 0 I 1
s Ellobius_lutescens.LOEQ01008920.1                          90483 19 +    110024 CCCTATGC------TACA-TGTA-TCC
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01109367.1                             664 19 +      6299 CCCTATGC------TACA-TGCA-TCC
i Ellobius_talpinus.LOJH01109367.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16328673 19 -  41312741 GCCCTTGC------TACA-TGTT-TTC
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144804 19 -  14770903 GCCATTGC------TATA-TGGT-TTC
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1282712 19 +   4378816 GCCTTTGC------TACA-CGTT-TCT
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18530533 19 -  39960074 GCCTTTGC------TACA-CGTT-TCT
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               32548 19 +    498745 GCCTTTGC------TACA-CGTT-TCT
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21204576 17 -  21539334 GCCTTTGT------TA---TGTT-TCC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13264 19 -     14127 GCCCTTGC------TACA-TATT-TCC
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                5964 19 -     16928 GCCCTTGC------TACA-TATT-TCC
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              14991 19 -     25546 GCCCTTGC------TACA-TATT-TCC
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12200 19 +     26330 GCCCTTGC------TACA-TATT-TCC
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 13428 19 +     23973 GCCCTTGC------TACA-TATT-TCC
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12197 19 +     75513 GCCCTTGC------TACA-TATT-TCC
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10123 19 +     97555 GCCCTTGC------TACA-TATT-TCC
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            13054 19 +     26496 GCCCTTGC------TATA-TATT-TCC
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  3664 19 -     17153 GCTCTTGC------TACA-TATT-TCC
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13239 19 +    111500 GCCCTTGC------TACA-TATT-TCC
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20236338 19 + 206538554 GCCCATAT------TACA-TGTT-TCC
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195181 19 + 205367284 GCCCTTAT------TACA-TGTT-TCC
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  8695 19 -     36744 GCCCTTAT------TACA-TGTT-TCC
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     425714 19 -    453645 GCCTTTGC------TA-CCTATT-TCT
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             3421 19 +     11339 GCCTTTGC------TA-CCTATT-TCT
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                             724 19 +     41679 GCCTTTGC------TA-CCTATT-TCT
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840                595 19 -      9135 GCCTTTGC------TACA-TGTT-TCC
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              15365 17 -     32273 GCCTTTGT------TA---TGTT-TCC
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186337511 17 + 186649187 gcctttgt------ta---TGTT-TCC
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6311 19 -     19426 GCCCTTGC------TACA-TATT-TCC
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             11460 19 -     15286 GCCCTTGC------TACA-TATT-TCC
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13099 19 +     18253 GCCCTTGC------TACA-TATT-TCC
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13200 19 -     41752 GCCCTTGC------TACA-TATT-TCC
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13037 19 -     16460 GCCCTTGC------TACA-TATT-TCC
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               241676 19 +    327341 GCCCTCGT------TACA-CGTT-TCC
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_596025                 161 19 +       452 GCCTTTGC------TGTA-TGCT-TCC
i Heterohyrax_brucei.HetBruBak_scaffold_596025           C 0 I 1
s Hoolock_leuconedys.ctg274                                    434178 17 +    630532 GCCTTTGT------TA---TGTT-TCC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  43836 19 +     55795 GCCCTTGT------TACA-TGTT-TTC
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_232023                                1944 17 -     12752 GCCTTTGT------TA---TGTT-TCC
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                               1988 17 +     14092 GCCTTTGT------TA---TGTT-TCC
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189542771 17 - 191637585 GCCTTTGT------TA---TGTT-TCC
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3335666 17 -  11177569 GCCTTTGT------TA---TGTT-TCC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7519389 19 -   7955117 tattttgc------ta-catgtT-TCC
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   21982 19 +     31101 GTCCTTGT------TACA-TATT-TCC
i Indri_indri.k141_3655594                               C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    13212 19 -     42476 GCCATTGC------TATA-TGGT-TTC
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15523546 19 -  30322482 GCCCTTGC------TACA-TATT-TCC
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        6899 17 +     64341 GCCTTTGT------TA---TGTT-TCC
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           4223 17 +      4941 GCCTTTGT------TA---TGTT-TCC
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        6941 17 +     35603 GCCTTTGT------TA---TGTT-TCC
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    28409 17 +     38576 GCCTTTGT------TA---TGTT-TCC
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         25106 17 +     66356 GCCTTTGT------TA---TGTT-TCC
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         10438 19 -     23766 GCCCTAGC------TA-CGTATT-TCC
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             28500 19 +     45836 GCCCTAGC------TA-CGTATT-TCC
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1039 19 +     25010 TCCCTTGC------TAT-GTATT-TCC
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      26436 19 +     54090 GCCCTAGC------TA-CGTATT-TCC
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3042212 19 +   3914936 GCCCTTGC------TACA-TGTT-TCC
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     5607 24 -     14121 -TTCTTGCCTCTGCTA-CGTATT-TCT
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1436527 17 +   1826925 GCCTTTGT------TA---TGTT-TCC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5098 19 +     11245 GCCCTTGC------TA-CCTATT-TCT
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1003948 19 +   6120653 GCCCTTGC------TA-CCTATT-TCT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4216515 19 -  43346337 ttttttgg------ct-tttgct-aCA
i Loxodonta_africana.GL010049.1                          C 0 I 1
s Lycaon_pictus.CM007581.1                                17954483 19 -  59628241 GCTCTTGC------TATA-TGTT-TCC
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               6335 17 +     40492 GCCTTTGT------TA---TGTT-TCC
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59675596 17 +  60120075 GCCTTTGT------TA---TGTT-TCC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 12108 17 -     26193 GCCTTTGT------TA---TGTT-TCC
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            79891 17 -    114318 GCCTTTGT------TA---TGTT-TCC
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  5582 17 -     23192 GCCTTTGT------TA---TGTT-TCC
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                15053 17 -     29190 GCCTTTGT------TA---TGTT-TCC
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  23618 17 +     37952 GCCTTTGT------TA---TGTT-TCC
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186838706 17 + 187317192 GCCTTTGT------TA---TGTT-TCC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25457270 17 -  25927173 GCCTTTGT------TA---TGTT-TCC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  79469 17 +     89720 GCCTTTGT------TA---TGTT-TCC
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 6467 17 +     20474 GCCTTTGT------TA---TGTT-TCC
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   6267 17 -     14993 GCCTTTGT------TA---TGTT-TCC
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  329133 17 -    668171 GCCTTTGT------TA---TGTT-TCC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 4582 17 -     24072 GCCTTTGT------TA---TGTT-TCC
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               25206 17 -     45290 GCCTTTGT------TA---TGTT-TCC
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 89977 19 +     94391 GCCAGTGC------TGTA-TGTT-TCC
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23936801 17 -  24302211 GCCTTTGT------TA---TGTT-TCC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               350930 17 +    752769 GCCTTTGT------TA---TGTT-TCC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33101699 19 -  40650429 tcttttgc------ta-aatgtT-TCC
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         9686 18 -    207569 GCTTCTGT------TA-GGTTTT-T-C
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              9390 19 +     13704 GCCCTTGC------TACA-TGTT-TCC
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 32184 19 +    140813 CCCTTTGT------TAT-GTGTT-ACC
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12181669 19 -  29670104 CCCTTTGC------TA-CCAGTA-TCT
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                5174 17 -      7380 GCCTTTGT------TA---TGTT-TCC
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               4247 17 +     18990 GCCTTTGT------TA---TGTT-TCC
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      5186 17 -      7356 GCCTTTGT------TA---TGTT-TCC
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18290961 19 -  93316391 gcccttgc------TACA-TATT-TCC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    21544  7 -    145209 -------------------TGTT-TCC
i Microgale_talazaci.MicTal_scaffold_6613                I 603 I 1
s Micronycteris_hirsuta.MicHir_scaffold_52381                14766 20 -     19307 GCTCCTGC------TGT-GTGTTTGGC
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 11
s Miniopterus_natalensis.LDJU01000034.1                    1849997 20 +   8254450 GCCATGGC------TATAATGTT-TTC
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             33674 20 +     64694 GCCATGGC------TATAATGTT-TTC
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           8521 17 -     28506 GCCTTTGT------TA---TGTT-TCC
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         5080 19 -      8324 GCCCTTGC------TACA-TGTT-TCC
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      8505 19 -     37649 GCCCTTGC------TACA-TATT-TCC
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140713 11 -    366855 ---------------GTA-TGTTTTTC
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 2 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   34789 19 +     37127 GCCCTTGT------TACA-TGTT-TCC
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5868 19 +     14753 GCCATTGC------TATA-TGGT-TTG
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84360788 19 - 120012414 CCCTTTGC------TAT-GTGTT-TCC
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr4                                       77084365 19 - 156508116 CTCTTTGT------TAT-GTGTT-TCC
i Mus_musculus.chr4                                      n 19 n 19
s Mus_pahari.LT608297.1                                   31354444 19 -  89631738 CTCTTTGC------TAT-GTGTT-TCC
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90751849 19 - 130317789 ctCTTTGC------TAT-GTGTT-TCC
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               300568 19 -  14710649 GCCCTTGC------TACA-TGTT-TCC
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                279041 19 -  10118263 GCCATTGT------TATA-TGGT-TTG
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1586734 19 -   6019432 GCCATTGC------TATA-TAGT-TTG
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902806 19 -   4330536 GCCATTGC------TATA-TGGT-TTG
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        33361 19 +     33610 GCCATTGC------TATA-TGGT-TTG
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              188153 10 +    196477 GCCTATAC------TA-----------
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 I 4
s Nannospalax_galili.KL204047.1                            2033289 18 -   3037898 -cctttgc------ta-CCTGTT-TCC
i Nannospalax_galili.KL204047.1                          I 25 C 0
s Nasalis_larvatus.k141_413338                               14516 17 +     21681 GCCTTTGT------TA---TGTT-TCC
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306334 19 +  31847680 GCCCTTGC------TACA-TGTT-TCC
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9148737 19 -   9404916 GCTCTTGC------TATA-TGTT-TCC
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102578927 19 - 196305487 GCCCTTGC------TA-CCTATT-TCT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_771082                               772 19 -      2667 GCCCTTGC------TA-CCTATT-TCT
i Nycticebus_coucang.k141_771082                         C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749348 19 + 199412804 GCCCTTAC------TA-CCTATT-TCT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1362763 18 +   3988456 -TTCTTTG------TTT-GTATT-CCC
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              506019 19 -   2017862 GCCCTTGC------TGCA-TGTT-TCC
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                    3662 19 -     28053 CCTTATGC------TGCA-TGTA-TCC
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    79577 19 +    102263 CCCTTTAC------TACA-TGTA-TCC
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9230 19 -     18566 GCCTTTGC------TACA-TGTT-TTC
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 I 1
s Oryctolagus_cuniculus.CM000791.1                        67146436 24 + 174332312 -TTCTTGCCTCTGCTACA-TATT-TCT
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       461705 19 -    559221 GCTCTTGC------TATA-TGTT-TCC
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         3246 19 +      8798 GCCTTTGC------TA-CCTATT-TCT
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             695410 19 -   1103335 gcctttgc------TA-CCTATT-TCT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    43458 17 +     80009 gcctttgt------ta---TGTT-TCC
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189142367 17 + 189151597 gcctttgt------ta---TGTT-TCC
i Pan_troglodytes.CM009242.2                             I 4 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  150540 19 +    230217 GCCCTTAT------TACA-TGTT-TCC
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                263746 19 +  18783137 GCCCTTAT------TACA-TGTT-TCC
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4720384 19 -   8748460 GCCCTTAT------TACA-TGTT-TCC
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183442550 17 + 183742232 GCCTTTGT------TA---TGTT-TCC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             6248 17 +     20448 GCCTTTGT------TA---TGTT-TCC
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563056 17 +  20919399 GCCTTTGT------TA---TGTT-TCC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   4992 17 +     41871 GCCTTTGT------TA---TGTT-TCC
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     8277 17 +     27711 GCCTTTGT------TA---TGTT-TCC
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  8355 17 +      9205 GCCTTTGT------TA---TGTT-TCC
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12007 19 -     78924 GCCCTTGT------TACA-TGTT-TCT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            9394 19 +     13100 GCCCTTGC------TA-CCTATT-TCT
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             7796 19 +     25941 GCCCTTGC------TA-CCTATT-TCT
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18194196 19 -  18517816 CCCTTAGC------TCCA-TTTA-TCC
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Piliocolobus_badius.k141_1234363                           43020 17 +     62158 GCCTTTGT------TA---TGTT-TCC
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        37751 17 +     89929 GCCTTTGT------TA---TGTT-TCC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            39167 17 +     51399 GCCTTTGT------TA---TGTT-TCC
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14295405 17 -  14605196 gcctttgt------ta---TGTT-TCC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1198 19 +     22620 TGCATTGC------TATA-TGGT-TTC
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189130498 17 + 189387572 gcctttgt------ta---TGTT-TCC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570106 17 +   9816681 GCCTTTGT------TA---TGTT-TCC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               72689 17 -     81375 GCCTTTGT------TA---TGTT-TCC
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              4509 17 +     19060 GCCTTTGT------TA---TGTT-TCC
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 12361 19 -     22811 GCCTTTGC------TGTA-TGCT-TCC
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 I 1
s Prolemur_simus.MPIZ01000396.1                            2596224 19 -   4620579 ccccttGC------TACA-TATT-TCC
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990207 19 +   2598838 gcccttgt------TACA-TATT-TCC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          28517 19 +     38485 GCCCTTGT------TACA-TATT-TCC
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                               560 19 -     13098 GCCCTTGT------TACA-TATT-TCC
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26038 19 +     35766 GCCCTTGT------TACA-TATT-TCC
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4225 19 -     24134 GCCCTTGT------TACA-TATT-TCC
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28050 19 -     67325 GCCCTTGT------TACA-TATT-TCC
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4273 19 -      6182 GCCCTTGT------TACA-TATT-TCC
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             9819 19 -     21651 CCCTTTGC------TAT-GCGTT-ACC
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            14053 20 -     21811 GCCACTGC------TCT-GTGTTTTTC
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39590 19 +     42204 GCCCTTGC------TACA-TGTT-TCC
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22976137 19 +  28871421 gccAGTGC------TATA-TGCT-TCC
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1359223 19 +   4952924 gccAGTGC------TATA-TGTT-TCC
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20273694 19 -  38429054 TCCCTTAT------TACA-TGTT-TCC
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             14516 17 -     91421 GCCTTTGT------TA---TGTT-TCC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7608639 17 +   7812017 GCCTTTGT------TA---TGTT-TCC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             14487 17 -     72585 GCCTTTGT------TA---TGTT-TCC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53570062 18 +  90668790 C-CTTCGC------TACA-TGTT-TCT
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             6204 16 -     11128 GCCTT-GT------TA---TGTT-TCC
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91235560 16 - 195417433 GCCTT-GT------TA---TGTT-TCC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7671209 16 +   7961872 GCCTT-GT------TA---TGTT-TCC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87158 19 -     96226 GCCAGTAC------TATA-TGTT-TCC
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               7580 16 -      8359 GCCTTTGT------GA---T-TT-TCC
i Saguinus_bicolor.k141_2619299                          I 9 C 0
s Saguinus_imperator.k141_2524406                             1539 17 +      2197 GCCTTTGT------TA---TGTT-TCC
i Saguinus_imperator.k141_2524406                        C 0 C 0
s Saguinus_inustus.k141_699149                               12953 17 +     13640 GCCTTTGT------TA---TGTT-TCC
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               7822 17 +      8564 GCCTTTGT------TA---TGTT-TCC
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209468671 17 + 209938924 GCCTTTGT------GA---TGTT-TCC
i Saguinus_midas.LG03                                    I 9 C 0
s Saguinus_mystax.k141_374627                                 7380 17 -      9399 GCCTTTGT------TA---TGTT-TCC
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119950301 17 - 121099817 gcCTTTGT------TA---TGTT-TCC
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       22757 17 +     46362 GCCTTTGT------TA---TGTT-TCC
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               22852 17 +     45824 GCCTTTGT------TA---TGTT-TCC
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             39480 17 -     64574 GCCTTTGT------TA---TGTT-TCC
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               2486 17 -     23631 GCCTTTGT------TA---TGTT-TCC
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 22748 17 -     61129 GCCTTTGT------TA---TGTT-TCC
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420076 17 -   5703754 GCATTTGT------TA---TGTT-TCC
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          55117 17 -     80660 GCATTTGT------TA---TGTT-TCC
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    152523 19 -    313613 GCCTTTGC------TACA-TGTT-TCC
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          19028 17 -     19888 GCCTTTGT------TA---TGTT-TCC
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26231 17 +     39453 GCCTTTGT------TA---TGTT-TCC
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            6750 17 +     27826 GCCTTTGT------TA---TGTT-TCC
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             6271 17 -     19483 GCCTTTGT------TA---TGTT-TCC
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      6339 17 +      7198 GCCTTTGT------TA---TGTT-TCC
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         14597 17 +     15514 GCCTTTGT------TA---TGTT-TCC
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11344 19 -     12148 CCCTTTGC------TACA-TATA-TCT
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               3157 19 +   1910179 GCCTTTGC------TACA-TGTT-TTC
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13650042 19 -  18376816 tcctttgc------agCA-AGTT-TCT
i Sorex_araneus.JH798187.1                               C 0 I 367
s Spermophilus_dauricus.KZ294078.1                         1952583 19 -   3870691 tcttttgc------ta-catgTT-TCC
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30092 19 +     97271 GCCCTTGC------TACA-TGTT-TCC
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              17675 19 -    196729 GCCCTTGT------TACA-TGTT-TCC
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6809851 19 +  69701581 GCCTCTGC------TATA-TCTT-TCC
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1092813 17 -   1523678 GCCTTTGT------TA---TGTT-TCC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 9962 19 +     41958 -TTATTAT------TATTATTTA-CTT
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 71507 10 +    116680 GCCTATGC------TA-----------
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 I 10
s Tapirus_indicus.TapInd_scaffold_9301                      118124 19 -    156842 ACCCTTGC------TCT-GTGCT-TCC
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    386577 19 +    539355 ACCCTTGC------TCT-GTGCT-TCC
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               25812 19 +     70052 GCCTTTGC------TACA-TGTT-TCC
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                 644 19 -     16117 GCCTTTGC------TACA-TGTT-TCC
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186427920 17 + 186847797 GCCTTTGT------TA---TGTT-TCC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   3761  3 +      8208 ------------------------tcc
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 I 1
s Tonatia_saurophila.TonSau_scaffold_294                     80297 20 +    610378 GCCACTGC------TGTA-TGTTTTTC
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 11
s Trachypithecus_auratus.k141_722599                         10322 17 -     20410 GCCTTTGT------TA---TGTT-TCC
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    14516 17 +     15221 GCCTTTGT------TA---TGTT-TCC
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                       10423 17 +     19930 GCCTTTGT------TA---TGTT-TCC
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       6850 17 -     19997 GCCTTTGT------TA---TGTT-TCC
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            46974 17 -     60166 GCCTTTGT------TA---TGTT-TCC
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        14445 17 -     27529 GCCTTTGT------TA---TGTT-TCC
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     14389 17 -     18194 GCCTTTGT------TA---TGTT-TCC
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           8117 17 -     21137 GCCTTTGT------TA---TGTT-TCC
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    6820 17 -     10723 GCCTTTGT------TA---TGTT-TCC
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         5976 17 +      9834 ACCTTTGT------TA---TGTT-TCC
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        24289 17 +     32220 GCCTTTGT------TA---TGTT-TCC
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5938391 17 +   6242583 GCCTTTGT------TA---TGTT-TCC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        7643 17 +     20839 GCCTTTGT------TA---TGTT-TCC
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2155045 19 +   4065304 GCCTCTGC------TG-Catgtt-tgt
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     8693 19 -     10553 GCCTTTGC------TGCA-TGTT-TGT
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   52695  5 -     77625 GCCTT----------------------
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 2
s Ursus_maritimus.KK499267.1                               4849795 19 -   5085361 GCTCTTGC------TACA-TGTT-TCC
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  10883 19 +     50397 GCCCTTGC------TACA-TATT-TCC
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             10942 19 +     24756 GCCCTTGC------TACA-TATT-TCC
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371236 19 -   5488506 GTCTTTGC------TATA-TGTT-TCC
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10150 19 -     43706 GCTCTTGC------TATA-TGCT-TCC
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        23787 19 -     24430 TCTTTTGC------TC-AATGTT-TCC
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          4527 19 +     86975 GCCCTTGC------TACA-TGTT-TCC
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      14377 19 +     63895 CATTTTGC------TACA-TGTG-TCT
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50341  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352  0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            62473  5 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Colobus_guereza.LG01                                   199948958  0 + 200372422 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    136758  0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6127 34 +     62944 A----------GGAC--ATGG------A-A----GTAGAAATTCTCTTCCC-AAT-AGT
s Acinonyx_jubatus.LLWD01001279.1                           826706 29 -   1699592 A----------GGAC--ATGG------A-A-ATAG----AG----ATTTCC-AGT-AGT
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_11939                     24765 28 -     89785 A----------GGAC--ATA-------A-AATG-G----GA----AT-CCC-AAATAGG
i Acomys_cahirinus.AcoCah_scaffold_11939                 C 0 I 20
s Ailuropoda_melanoleuca.LNAT01000098.1                    9509954 29 -  29979442 A----------GGAC--ATGG------A-A-ATAG----AA----ATTTCC-AGT-AGC
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             78725 29 -    347723 A----------AGAC--ATGG------A-A-ATAG----AA----ATTTCC-AGT-AGT
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     74086 26 -     89534 A----------GGAC--ATGG------A-AG-TAG----GA----AT-TCC-CAG---T
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14044 34 -     52922 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAT-AGC
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         13986 34 -     28001 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAC-AGT
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          4482 34 -     18505 A----------GGAC--ACGG------A-A----GTACGCATTCCCTTCCC-AAC-AGT
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           5335 34 -     12518 A----------GGAC--ACGG------A-A----GTACGCATTCCCTTCCC-AAC-AGT
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                              2789 33 -     27731 A----------GGAC--ACAG------A-A----GTAGAAATTCCGTTCCC-AAT-A-T
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                2920 33 +      3134 A----------GGAC--ACAG------A-A----GTAGAAATTCCCTTCCC-AAT-A-T
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               3048 33 -     45847 A----------GGAC--ACAG------A-A----GTAGAAATTCCCTTCCC-AAT-A-T
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_2469512                                  458 33 +      1018 A----------GGAC--ACAG------A-A----GTAGATATTCCCTTCCC-AAT-A-T
i Alouatta_juara.k141_2469512                            I 313 I 127
s Alouatta_macconnelli.k141_918386                               0 16 -      9457 ----------------------------------------ATTCCCTTCCC-AAT-A-T
i Alouatta_macconnelli.k141_918386                       N 0 C 0
s Alouatta_nigerrima.k141_3472759                            17554 33 -     18578 A----------GCAC--ACAG------A-A----GTAGATATTCCCTTCCC-AAT-A-T
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              2953 33 +     47717 A----------GGAC--ACAG------A-A----GTAGAAATTCCCTTCCC-AAT-A-T
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             3053 33 -      3544 A----------GGAC--ACAG------A-A----GTAGATATTCCCTTCCC-AAT-A-T
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             14277 33 +     50774 A----------GCAC--ACAG------A-A----GTAGATATTCCCTTCCC-AAT-A-T
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184472 12 +    412891 ---------------------------------------------ATTTCC-AGT-AGT
i Anoura_caudifer.AnoCau_scaffold_1412                   I 11 C 0
s Aotus_azarae.k141_3104676                                  14897 34 -     33861 A----------GGAC--ATGG------A-A----GTAGAAATTCCCTTCCC-AAT-AGT
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            14917 34 -     34016 A----------GGAC--ATGG------A-A----GTAGAAATTCCCTTCCC-AAT-AGT
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297314 34 -   5030052 A----------GGAC--ATGG------A-A----GTAGAAATTCCCTTCCC-AAT-AGT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             14919 34 -     34685 A----------GGAC--ATGG------A-A----GTAGAAATTCCCTTCCC-AAT-AGT
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28043 34 -     47192 A----------GGAC--ATGG------A-A----GTAGAAATTCCCTTCCC-AAT-AGT
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      11284 39 +     20879 ACGATATGAAAGAGT--ATAG------A-AG-TAG----AA----AT-ATCTAAT-GGT
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       10783 26 +     14667 A----------GAAC--ATGC------T-A----A----GA----ATTTCC-AAG-AGT
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3879 12 +     43469 ---------------------------------------------ATTTCC-AGT-AGT
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 11 C 0
s Avahi_laniger.k141_765380                                  53180 26 -     92717 T----------GGAC--ATGG------T-A----G----GA----ATCCCC-AAT-AGT
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              53807 26 +     85213 T----------GGAC--ATGG------T-A----G----GA----ATCCCC-AAT-AGT
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             4651 34 -     10423 A----------GGAC--ACAG------A-A----GTAGAAATTCCCTTCCC-AAT-AGT
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             24125 34 +     31915 A----------GGAC--ACAG------A-A----GTAGAAATTCCCTTCCC-AAT-AGT
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            4617 34 +      5267 A----------GGAC--ACAG------A-A----GTAGAAATTCCCTTCCC-AAT-AGT
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23589831 34 - 189096842 A----------GGAC--ACAG------A-A----GTAGAAATTCCCTTCCC-AAT-AGT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             11361 34 -     12001 A----------GGAC--ACAG------A-A----GTAGAAATTCCCTTCCC-AAT-AGT
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10001769 16 -  17673402 A----------GGAC--ACGG------A-A-ATAG----G-------------------
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334227 16 -   7040546 A----------GGAC--ACGG------A-A-ATAG----G-------------------
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  402510 16 -   1652518 A----------GGAC--ACGG------A-A-ATAG----G-------------------
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17798554 29 -  60362399 A----------GGAT--GTGG------A-A-ATAG----AA----ATTTCC-AGT-AGT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184611 29 -    185531 A----------GGAT--GTGG------A-A-ATAG----AA----ATTTCC-AGT-AGT
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9033997 29 -   9314153 A----------GGAT--GTGG------A-A-ATAG----AA----ATTTCC-AGT-AGT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17958262 29 -  59632846 A----------GGAT--GTGG------A-A-ATAG----AA----ATTTCC-AGT-AGT
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18499774 29 +  63665305 A----------GGAT--GTGG------A-A-ATAG----AA----ATTTCC-AGT-AGT
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007247396.1                           200809 29 +    308752 A----------GGTC--ATGG------A-A----GTA-GGA----ATTGCC-AGT-AGC
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                4242 12 -     11696 ---------------------------------------------ATTTCC-AGT-AGT
i Carollia_perspicillata.CarPer_scaffold_92756           I 11 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     92384 29 +    217609 A----------GGAC--ATGG------A-A-ATAG----AA----TTTTCC-AGT-AGT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          9276 34 -     11392 A----------GGAC--ACAG------A-A----GTAGAAATTCCCTTCCC-AAT-AGT
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               5374 34 -      7577 A----------GGAC--ACAG------A-A----GTAGAAATTCCCTTCCC-AAT-AGT
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25651426 34 +  26074798 G----------GGAC--ACGG------A-A----GTAGAAATTCCCTTCCC-AAT-AGC
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_398305                                 1002 34 +      1777 G----------GGAC--ACGG------A-A----GTAGAAATTCCCTTCCC-AAT-AGC
i Cebus_olivaceus.k141_398305                            C 0 C 0
s Cebus_unicolor.k141_544048                                 49335 34 -     74725 G----------GGAC--ACGG------A-A----GTAGAAATTCCCTTCCC-AAT-AGC
i Cebus_unicolor.k141_544048                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         4824 29 +     31688 A----------GGTC--ATGG------A-A----GTA-GGA----ATTGCC-AGT-AGC
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12230816 11 +  27778364 A----------GGAC--ATGG------A-A-----------------------------
i Ceratotherium_simum.JH767749.1                         C 0 I 2
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1843 11 -     25243 A----------GGAC--ATGG------A-A-----------------------------
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 I 2
s Cercocebus_atys.KQ010504.1                               4474997 34 +   4669795 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAT-AGT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        13542 34 -     19203 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAT-AGT
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3846941                           7968 34 +      8260 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAT-AGT
i Cercocebus_lunulatus.k141_3846941                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           8194 34 +     27781 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAT-AGT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         8354 34 -     20310 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAT-AGT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          11333 34 +     29689 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAT-AGT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            5762 34 +      9989 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAT-AGT
i Cercopithecus_diana.k141_2427854                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          14012 34 -     27936 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAT-AGT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            2878 34 -     17152 A----------GGAT--ATGG------A-A----GTACGCATTCCCTTCCC-AAT-AGT
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38816412 34 +  39242232 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAT-AGT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222107 34 -  21565898 A----------GGAT--ATGG------A-A----GTACGCATTCCCTTCCC-AAT-AGT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       39225 34 -     53127 A----------GGAT--ATGG------A-A----GTACGCATTCCCTTCCC-AAT-AGT
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        6493 34 +      7159 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAT-AGT
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14028 34 -     27947 A----------GGAT--ATGG------A-A----GTACGCATTCCCTTCCC-AAT-AGT
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         14001 34 +     17596 A----------GGAT--ATGG------A-A----GTACGCATTCCCTTCCC-AAT-AGT
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          3235 34 +     26000 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAT-AGT
i Cercopithecus_roloway.k141_2567858                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_713168             210  5 -      2554 -----------------------------------------------------ag-cac
i Chaetophractus_vellerosus.ChaVel_scaffold_713168       I 1 I 1637
s Cheirogaleus_major.k141_333249                             20558 26 -     52598 A----------AGAC--ATGG------T-A----G----GA----TTTCCC-AAT-AGT
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           15923 26 +     57038 A----------AGAC--ATGA------T-A----G----GA----TTTCCC-AAT-AGT
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                          10534 34 +     11226 A----------GGAT--GCAG------A-A----GTAGAAATTCCCTTCCC-AAT-AGT
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18427986 34 -  18827391 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAT-AGT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       14423 34 -     50209 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAT-AGT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135421423 34 + 135778131 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAT-AGT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 17268  5 +     19366 -----------------------------------------------------AG-AAT
i Choloepus_didactylus.ChoDid_scaffold_45914             I 10 C 0
s Choloepus_hoffmanni.KN194906.1                            172365  5 +    839153 -----------------------------------------------------AG-AAT
i Choloepus_hoffmanni.KN194906.1                         I 8 C 0
s Colobus_angolensis.KN981557.1                            1909939 34 +   2368649 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAC-AGT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_polykomos.k141_906115                              36477 34 +     84244 A----------GGAC--ATGG------A-A----GTATGCATTCCCTTCCC-AAC-AGT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17547475 29 -  53390261 A----------GAAA--ATTA------A-AGG-AG----GA----AATTCC-AGC-AGT
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          13689 29 -     20389 A----------GGAT--GTGG------A-AG-TAG----AA----ATTTCC-AGA-AGT
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 49526 28 +     63868 A----------GGAC--ATA-------A-A-ACAG----GA----AT-CGA-TAATAGT
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11667005 28 + 224834208 A----------AGAC--ATA-------A-A-TTAG----GA----AT-CCC-AAATAGT
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               2399 11 -     19598 ---------------------------------------GG----AATTCA-AG----T
i Crocidura_indochinensis.CroInd_scaffold_37019          I 392 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27860 29 -     87169 A----------GGAT--ATGG------A-A-ATAT----AA----ATTTCC-AGT-AGT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    836573 28 +   1526836 A----------AAAC--AAAG------A-AG-TAG----AA----AT-ATC-AAG-AGT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12536782 26 -  12879189 A----------GGAC--ATTG------T-A----G----GA----ATTCCC-AAT-AGT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8629256 12 +  20541912 ---------------------------------------------ATTTCC-AGT-AGT
i Desmodus_rotundus.KZ672289.1                           I 11 C 0
s Echinops_telfairi.JH980293.1                            48779823  5 + 111700974 -----------------------------------------------------AG-AGT
i Echinops_telfairi.JH980293.1                           I 1 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672667 11 +   1390856 A----------GGAC--ATGG------A-A-----------------------------
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 2
s Diceros_bicornis.DicBicMic_scaffold_5955                    5419 11 +    198055 A----------GGAC--ATGG------A-A-----------------------------
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 2
s Eidolon_helvum.KE759718.1                                   9899 29 +     11740 A----------GTAT--ATGA------A-AGG-AG----GA----ATTTCT-AGT-AGT
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1097120  5 +  10337057 -----------------------------------------------------TG-AGT
i Elephantulus_edwardii.JH947257.1                       I 1 C 0
s Ellobius_lutescens.LOEQ01008920.1                          90502 28 +    110024 A----------GGAC--ATA-------A-A-ATAG----CA----AT-CCC-AAATTGT
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01109367.1                             683 28 +      6299 A----------GGAC--ATA-------A-A-ATAG----GA----AT-CCC-AAAATGT
i Ellobius_talpinus.LOJH01109367.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16328692 29 -  41312741 A----------GGAC--ATGG------A-A-ATAG----AA----ATTTCC-AGT-AGT
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144823 29 -  14770903 A----------GGAC--ATGG------T-C-CTAG----AA----ATTTTC-AGT-AGT
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1282731 11 +   4378816 A----------GGAC--ATGG------A-A-----------------------------
i Equus_asinus.JREZ01000139.1                            C 0 I 2
s Equus_caballus.CM000403.2                               18530552 11 -  39960074 A----------GGAC--ATGG------A-A-----------------------------
i Equus_caballus.CM000403.2                              C 0 I 2
s Equus_przewalskii.KK951119.1                               32567 11 +    498745 A----------GGAC--ATGG------A-A-----------------------------
i Equus_przewalskii.KK951119.1                           C 0 I 2
s Erythrocebus_patas.Contig38                             21204593 34 -  21539334 A----------GGAC--ATGG------A-A----GTACGCATTTCCTTCCC-AAC-AGT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13283 26 -     14127 A----------GGAC--ATGG------T-A----G----GA----ATTCTC-AAT-AGT
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                5983 26 -     16928 A----------GGAC--ATGG------T-A----G----GA----ATTCTC-AAT-AGT
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15010 26 -     25546 A----------GGAC--ATGG------T-A----G----GA----ATTCTC-AAT-AGT
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12219 26 +     26330 A----------GGAC--ATGG------T-A----G----GA----ATTCTC-AAT-AGT
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 13447 26 +     23973 A----------GGAC--ATGG------T-A----G----GA----ATTCTC-AAT-AGT
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12216 26 +     75513 A----------GGAC--ATGG------T-A----G----GA----ATTCTC-AAT-AGT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10142 26 +     97555 A----------GGAC--ATGG------T-A----G----GA----ATTCTC-AAC-AGT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            13073 26 +     26496 A----------GGAC--ATGG------T-A----G----GA----ATTCTC-AAT-AGT
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  3683 26 -     17153 A----------GGAC--ATGG------T-A----G----GA----ATTCTC-AAT-AGT
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13258 26 +    111500 A----------GGAC--ATGG------T-A----G----GA----ATTCTC-AAT-AGT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20236357 29 + 206538554 A----------GGAC--ATGG------A-A-ATAG----AG----ATTTCC-AGT-AGT
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195200 29 + 205367284 A----------GGAC--ATGG------A-A-ATAG----AG----ATTTCC-AGT-AGT
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  8714 29 -     36744 A----------GGAC--ATGG------A-A-ATAG----AG----ATTTCC-AGT-AGT
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     425733 28 -    453645 A----------GAATAAATAG------C-A----A----GT----ATTCTC-AAG-AGT
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             3440 28 +     11339 A----------GAATAAATAG------C-A----A----GA----ATTCTC-AAG-AGT
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                             743 28 +     41679 A----------GAATAGATAG------C-A----A----GA----ATTCCC-AAG-AGT
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840                614 29 -      9135 A----------GGAC--ATGG------A-A-ATAG----GA----ATTCCC-AGT-AGT
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              15382 34 -     32273 A----------GGAC--ATGG------A-A----GTAGAAATTCTCTTCCC-AAT-AGT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186337528 34 + 186649187 A----------GGAC--ATGG------A-A----GTAGAAATTCTCTTCCC-AAT-AGT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6330 26 -     19426 A----------AGAC--ATGG------T-A----G----GA----ATTTCC-AAT-AGT
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             11479 26 -     15286 A----------AGAC--ATGG------T-A----G----GA----ATTTCC-AAT-AGT
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13118 26 +     18253 A----------AGAC--ATGG------T-A----G----GA----ATTTCC-AAT-AGT
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13219 26 -     41752 A----------AGAC--ATGG------T-A----G----GA----ATTTCC-AAT-AGT
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13056 26 -     16460 A----------AAAC--ATGG------T-A----G----GA----ATTTCC-AAT-AGT
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               241695 29 +    327341 A----------GGAT--AAGG------A-A-ATAT----AA----ATTTTC-AGG-AAT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_596025                 181  5 +       452 -----------------------------------------------------AG-AGT
i Heterohyrax_brucei.HetBruBak_scaffold_596025           I 1 C 0
s Hoolock_leuconedys.ctg274                                    434195 34 +    630532 A----------GGAC--ATGG------A-A----ATAGAAATTCCCTTCCC-AAT-AGT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  43855 29 +     55795 A----------GGAC--ATGG------A-A-ATAT----AA----ATTTCC-AAG-AGT
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_232023                                1961 34 -     12752 A----------GGAC--ATGG------A-A----ATAGAAATTCCCTTCCC-AAT-AGT
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                               2005 34 +     14092 A----------GGAC--ATGG------A-A----ATAGAAATTCCCTTCCC-AAT-AGT
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189542788 34 - 191637585 A----------GGAC--ATGG------A-A----ATAGAAATTCCCTTCCC-AAT-AGT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3335683 34 -  11177569 A----------GGAC--ATGG------A-A----ATAGAAATTCCCTTCCC-AAT-AGT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7519408 39 -   7955117 AAGACATGCAACAGC--ATAG------A-AG-TAG----GA----AT-TTCTAAT-AGT
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   22001 26 +     31101 A----------GGGC--ATGG------T-A----G----AA----ATTCCC-AAC-AGT
i Indri_indri.k141_3655594                               C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    13231 29 -     42476 A----------GAAC--ATGG------A-C-CTAG----AA----ATTTTT-AGT-AAT
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15523565 26 -  30322482 A----------AGAC--ATGG------T-A----G----GA----ATTTCC-AGT-AGT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        6916 34 +     64341 A----------GGAT--GCAG------A-A----GTAGAAATTCCCTTCCC-AAT-AGT
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           4240 34 +      4941 A----------GGAT--GCAG------A-A----GTAGAAATTCCCTTCCC-AAT-AGT
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        6958 34 +     35603 A----------GGAT--GCAG------A-A----GTAGAAATTCCCTTCCC-AAT-AGT
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    28426 34 +     38576 A----------GGAC--ACAG------A-A----GTAGAAATTCCCTTCCC-AAT-GGT
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         25123 34 +     66356 A----------GGAC--ACAG------A-A----GTAGAAATTCCCTTCCC-AAT-GGT
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         10457 26 -     23766 A----------GGCC--ACGG------T-A----G----GA----ATTCCC-AAT-AGT
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             28519 26 +     45836 A----------GGCC--ATGG------T-A----G----GA----ATTCCC-AAT-AGC
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1058 26 +     25010 A----------GGCC--ATGG------T-A----G----GA----ATTCCC-AAT-AGT
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      26455 26 +     54090 A----------GGCC--ATGG------T-A----G----AA----ATTCCC-AAT-AGC
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3042231 27 +   3914936 A----------GGAC--ATGG------A-A-ATAG----AA----ATTTCC-ACT-A--
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     5631 28 -     14121 A----------AGAT--GCGG------G-ACAG-G-----A----AGTGCC-AAT-AGT
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1436544 34 +   1826925 A----------GGAC--ATGG------A-A----GTACACATTCCCTTCCC-AAT-AGC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5117 26 +     11245 A----------GAAC--ATGG------T-A----A----GA----ATTCCC-AAG-AGT
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1003967 26 +   6120653 A----------GAAC--ATGG------T-A----A----GA----ATTCCC-AAG-AGT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4216535  2 -  43346337 -----------------------------------------------------CG----
i Loxodonta_africana.GL010049.1                          I 1 I 220
s Lycaon_pictus.CM007581.1                                17954502 29 -  59628241 A----------GGAC--GTGG------A-A-ATAG----AA----ATTTCC-AGT-AGT
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               6352 34 +     40492 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAT-AGT
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59675613 34 +  60120075 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAT-AGT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 12125 34 -     26193 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAT-AGT
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            79908 34 -    114318 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAT-AGT
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  5599 34 -     23192 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAT-AGT
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                15070 34 -     29190 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAT-AGT
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  23635 34 +     37952 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAT-AGT
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186838723 34 + 187317192 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAT-AGT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25457287 34 -  25927173 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAT-AGT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  79486 34 +     89720 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAT-AGT
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 6484 34 +     20474 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAT-AGT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   6284 34 -     14993 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAT-AGT
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  329150 34 -    668171 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAT-AGT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 4599 34 -     24072 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAT-AGT
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               25223 34 -     45290 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAT-AGT
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 89996 29 +     94391 A----------GTAT--ATGA------A-AG-TAG----GA----ATTTCT-AGT-AGT
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23936818 34 -  24302211 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAC-AGT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               350947 34 +    752769 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAC-AGT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33101718 39 -  40650429 AAGATATGCAAGAGC--ATAG------A-AG-TAG----GA----AT-TTCTAAT-AGT
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         9704 29 -    207569 A----------GGAC--ACAG------A-AGTG-G----GA----ATATTC-AGA-AGT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              9409 29 +     13704 A----------GGAC--ATGG------A-A-ACAG----AA----ATTTAC-AGT-AGT
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 32203 26 +    140813 A----------GGAC----A-------A-A-ATAG----GA----AT-CCC-AAATAGT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12181688 28 -  29670104 A----------GGAC--ATA-------A-A-TTAG----GA----AC-CCT-AAATAGT
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                5191 34 -      7380 A----------GGAC--ACAG------A-A----GTAGAAATTCCCTTCCC-AAT-AGT
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               4264 34 +     18990 A----------GGAC--ACAG------A-A----GTAGAAATTCCCTTCCC-AAT-AGT
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      5203 34 -      7356 A----------GGAC--ACAG------A-A----GTAGAAATTCCCTTCCC-AAT-AGT
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18290980 26 -  93316391 A----------AGAC--ATGG------T-A----G----GA----TTTCCC-AAT-AGT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    21552  5 -    145209 -----------------------------------------------------AG-AGT
i Microgale_talazaci.MicTal_scaffold_6613                I 1 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                14797 12 -     19307 ---------------------------------------------ATGTCC-AAT-AGC
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 11 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850017 28 +   8254450 A----------GGAC--ATG-------A-C-ACAG----GA----ATTTCC-AGT-TGT
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             33694 28 +     64694 A----------GGAC--ATG-------A-C-ACAG----GA----ATTTCC-AGT-TGT
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           8538 34 -     28506 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAT-AGT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         5099 27 -      8324 A----------GGAC--ATGG------A-A-ATAG----AA----ATTTCC-ACT-C--
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      8524 26 -     37649 A----------AGAC--ATGG------T-A----G----AA----TTTCCC-AAT-AGT
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140724 29 -    366855 A----------GGGC--ATGG------A-C-ATAG----GC----ATTTCC-AAT-ACT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   34808 29 +     37127 A----------GGAT--ATGA------A-A-ATAT----AA----ATTTTC-AGG-AAT
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5887 29 +     14753 A----------GGAC--ATGG------A-C-CTAG----AA----ATTTTC-CGT-AGT
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84360807 28 - 120012414 A----------GCAC--ATA-------A-A-ATAG----GA----AT-CCC-AAATAGG
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87649808 28 - 129401213 A----------GCAC--ATA-------A-A-ATAG----GA----AT-CCC-AAATAGG
i Mus_musculus.chr8                                      I 19 C 0
s Mus_pahari.LT608297.1                                   31354463 28 -  89631738 A----------GCAC--ATA-------A-A-ATAG----GA----AA-CCC-AAATAGG
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90751868 28 - 130317789 A----------GCAC--ATA-------A-A-ATAG----GA----AT-CCC-AAATAGG
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               300587 35 -  14710649 A----------GGac--atggaaatgga-a-atag----aa----atttcC-AGT-AGT
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                279060 29 -  10118263 A----------GGAC--ATGG------A-C-CTAG----AA----ATTTTC-AGT-AGT
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1586753 29 -   6019432 A----------GGAC--ATGG------A-C-CTAG----AA----ATTTTC-AAT-AGT
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902825 29 -   4330536 A----------GGAC--ATGG------A-C-CTAG----AA----ATTTTC-AGT-AGT
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        33380 29 +     33610 A----------GGAC--ATGG------A-C-CTAG----AA----ATTTTC-AGT-AGT
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              188167  5 +    196477 -----------------------------------------------------AG-AAT
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 4 C 0
s Nannospalax_galili.KL204047.1                            2033307 28 -   3037898 A----------GGAC--ATG-------G-A-ATAG----GA----AT-TTC-GAATATT
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               14533 34 +     21681 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAA-AGT
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306353 27 +  31847680 A----------GGAC--ATGG------A-A-ATAG----AA----ATTTCC-ACT-A--
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9148756 29 -   9404916 A----------GGAC--ATGG------A-A-ATAG----AA----ATTTCC-AGT-AGT
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102578946 26 - 196305487 A----------GAAC--ATGG------T-A----A----GA----ATTCCC-AAG-AGT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_771082                               791 26 -      2667 A----------GAAC--ATGG------T-A----A----GA----ATTCCC-AAG-AGT
i Nycticebus_coucang.k141_771082                         C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749367 26 + 199412804 A----------GAAC--ATGG------T-A----A----GA----ATTCCC-AAG-AGT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1362781 29 +   3988456 A----------TGAC--ATTG------GCATAG-G-----A----ATTGTC-AGT-GGT
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              506038 27 -   2017862 A----------GGAC--ATGG------A-A-ATAG----AA----ATTTCC-ACT-A--
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                    3681 28 -     28053 A----------GGAC--ATA-------A-A-ATAG----GA----AT-CCC-AAATAGT
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    79596 28 +    102263 A----------GGAC--ATA-------A-A-TTAG----GA----AT-CCC-AAATAGA
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9250  5 -     18566 -----------------------------------------------------AG-AGT
i Orycteropus_afer.OryAfe_flattened_line_144387          I 1 C 0
s Oryctolagus_cuniculus.CM000791.1                        67146460 28 + 174332312 A----------AGAT--GCAG------G-ACAG-G-----A----ATTGTC-AAT-AGT
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       461724 29 -    559221 A----------GGAC--ATGG------A-A-ATAG----AA----ATTTCC-AGT-AGT
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         3265 28 +      8798 A----------GAATAAATAG------C-A----A----GA----ATTCTC-AAG-AGT
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             695429 28 -   1103335 A----------GAATAAATAG------C-A----A----GA----ATTCTC-AAG-AGT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    43475 34 +     80009 A----------GGAC--ATGG------A-A----GTAGAAATTCTCTTCCC-AAT-AGT
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189142384 34 + 189151597 A----------GGAC--ATGG------A-A----GTAGAAATTCTCTTCCC-AAT-AGT
i Pan_troglodytes.CM009242.2                             C 0 I 20
s Panthera_onca.PanOnc_flattened_line_3271                  150559 29 +    230217 A----------GGAC--ATGG------A-A-ATAG----AG----ATTTCC-AGT-AGT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                263765 29 +  18783137 A----------GGAC--ATGG------A-A-ATAG----AG----ATTTCC-AGT-AGT
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4720403 29 -   8748460 A----------GGAC--ATGG------A-A-ATAG----AG----ATTTCC-AGT-AGT
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183442567 34 + 183742232 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAT-AGT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             6265 34 +     20448 A----------GGAC--ATGG------A-A----GTATGCATTCCCTTCCC-AAT-AGT
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563073 34 +  20919399 A----------GGAC--ATGG------A-A----GTACACATTCCCTTCCC-AAT-AGT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   5009 34 +     41871 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAT-AGT
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     8294 34 +     27711 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAT-AGT
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  8372 34 +      9205 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAT-AGT
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12026 29 -     78924 A----------GGAC--ATGG------A-A-ATAG----AA----GTTTCC-ACT-AGT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            9413 26 +     13100 A----------GAAC--ATGG------T-A----A----GA----ATTCCC-AAG-AGT
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             7815 26 +     25941 A----------GAAC--ATGG------T-A----A----GA----ATTCCC-AAG-AGT
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18194215 28 -  18517816 A----------TGAC--ATA-------A-A-TTAG----GA----AT-CCC-AAATAGT
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Piliocolobus_badius.k141_1234363                           43037 34 +     62158 A----------GGAC--ATGG------A-A----GTACTCATTCCCTTCCC-AAC-AGT
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        37768 34 +     89929 A----------GGAC--ATGG------A-A----GTACTCATTCCCTTCCC-AAC-AGT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            39184 34 +     51399 A----------GGAC--ATGG------A-A----GTACTCATTCCCTTCCC-AAC-AGT
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14295422 34 -  14605196 A----------GGAC--ATGG------A-A----GTACTCATTCCCTTCCC-AAC-AGT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1217 29 +     22620 A----------GGAT--ATGG------A-C-CTAG----AA----ATTTTC-AGT-AGT
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189130515 34 + 189387572 A----------GGAC--ATGG------A-A----GTAGAAATTCTCTTCCC-AAT-AGT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570123 34 +   9816681 A----------GGAC--ATGG------A-A----GTAGAAATTCTCTTCCC-AAT-AGT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               72706 34 -     81375 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAA-AGT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              4526 34 +     19060 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAA-AGT
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 12381  5 -     22811 -----------------------------------------------------AG-AGT
i Procavia_capensis.ProCapCap_scaffold_85530             I 1 C 0
s Prolemur_simus.MPIZ01000396.1                            2596243 26 -   4620579 A----------AGAC--ATGG------T-A----G----GA----ATTTCC-AAT-AGT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990226 26 +   2598838 T----------GGAC--ATGG------T-A----G----GA----ATTCCC-AAT-AGT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          28536 26 +     38485 T----------GGAC--ATGG------T-A----G----GA----ATTCCC-AAT-AGT
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                               579 26 -     13098 T----------GGAC--ATGG------T-A----G----GA----ATTCCC-AAT-AGT
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26057 26 +     35766 T----------GGAC--ATGG------T-A----G----GA----ATTCCC-AAT-AGT
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4244 26 -     24134 T----------GGAC--ATGG------T-A----G----GA----ATTCCC-AAT-AGT
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28069 26 -     67325 T----------GGAC--ATGG------T-A----G----GA----ATTCCC-AAT-AGT
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4292 26 -      6182 T----------GGAC--ATGG------T-A----G----GA----ATTCCC-AAT-AGT
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             9838 28 -     21651 A----------CAAC--ATA-------A-A-ATAG----GA----AT-CCC-AAATAGT
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            14073 29 -     21811 A----------GGGC--ACAG------A-C-ATAG----GC----ATTTCC-AGC-AGC
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39609 29 +     42204 A----------GGAC--ATGG------A-A-ATAG----AA----ATTTCC-AGT-AGT
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22976156 29 +  28871421 A----------GTAT--ATGA------A-AG-TAG----GA----ATTTCT-AGT-AGT
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1359242 29 +   4952924 A----------GTAT--ATGA------A-AG-TAG----GA----ATTTCT-AGT-AGT
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20273713 29 -  38429054 A----------GGAC--ATGG------A-A-ATAG----AG----ATTTCC-AGT-AGT
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             14533 34 -     91421 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAA-AGT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7608656 34 +   7812017 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAA-AGT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             14504 34 -     72585 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAA-AGT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53570080 28 +  90668790 A----------GGAC--AAA-------A-A-ATAG----GA----AT-CCC-AAGTAAC
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             6220 34 -     11128 G----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAA-AGT
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91235576 34 - 195417433 G----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAA-AGT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7671225 34 +   7961872 G----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAA-AGT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87177 29 -     96226 A----------GTAT--ATGA------A-AG-TAG----GA----ATTTTT-AGT-AGT
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               7596 34 -      8359 A----------GGAT--GCAG------A-A----GTAGAAATTCCCTTCCC-AAT-AGT
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_imperator.k141_2524406                             1556 34 +      2197 G----------GGAT--GCAG------A-A----GTAGAAATTCCCTTCCC-AAT-AGT
i Saguinus_imperator.k141_2524406                        C 0 C 0
s Saguinus_inustus.k141_699149                               12970 34 +     13640 A----------GGAT--GCAG------A-A----GTAGAAATTCCCTTCCC-AAT-AGT
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               7839 34 +      8564 A----------GGAT--GCAG------A-A----GTAGAAATTCCCTTCCC-AAT-AGT
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209468688 34 + 209938924 A----------GGAT--GCAG------A-A----GTAGAAATTCCCTTCCC-AAT-AGT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 7397 34 -      9399 A----------GGAT--GCAG------A-A----GTAGAAATTCCCTTCCC-AAT-AGT
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119950318 34 - 121099817 A----------GGAC--ACGG------A-A----GTAGAAATTCCCTTCTC-AAT-AGT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       22774 34 +     46362 A----------GGAC--ACGG------A-A----GTAGAAATTCCCTTCTC-AAT-AGT
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               22869 34 +     45824 A----------GGAC--ACGG------A-A----GTAGAAATTCCCTTCTC-AAT-AGT
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             39497 34 -     64574 A----------GGAC--ACGG------A-A----GTAGAAATTCCCTTCTC-AAT-AGT
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               2503 34 -     23631 A----------GGAC--ACGG------A-A----GTAGAAATTCCCTTCTC-AAT-AGT
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 22765 34 -     61129 A----------GGAC--ACGG------A-A----GTAGAAATTCCCTTCTC-AAT-AGT
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420093 34 -   5703754 G----------GGAC--ACAG------A-A----GTAGAAATTCCCTTCCC-AAT-AGC
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          55134 34 -     80660 G----------GGAC--ACAG------A-A----GTAGAAATTCCCTTCCC-AAT-AGC
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    152542 29 -    313613 A----------GGAA--AAGA------A-AG-TAG----AA----ATTTCC-AGC-AGC
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          19045 34 -     19888 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAA-AGT
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26248 34 +     39453 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAA-AGT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            6767 34 +     27826 A----------GGAC--ATGG------A-A----GTACACATTCCCTTCCC-AAA-AGT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             6288 34 -     19483 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAA-AGT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      6356 34 +      7198 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAA-AGT
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         14614 34 +     15514 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAA-AGT
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11363 24 -     12148 A----------GGAC--ATA-------A-A-TTAG----GA----AT-CCC-AAA----
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               3176 29 +   1910179 C----------AGGA--ATGA------A-GG-TAG----GA----ATTCCC-AGT-TTT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13650428 24 -  18376816 C----------ACGG-TAACA------G-GG--------GG----ATTTCA-AG----T
i Sorex_araneus.JH798187.1                               I 367 C 0
s Spermophilus_dauricus.KZ294078.1                         1952602 39 -   3870691 AAGACATGCAACAGC--ATAG------A-AG-TAG----GA----AT-TTCAAAT-AGT
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30111 28 +     97271 A-----------GAC--ATGG------A-A-ATAG----AA----ATTTCC-ATT-AGC
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              17694 29 -    196729 A----------GGAT--ATGG------A-A-ATAT----AA----ATTATC-AGG-AAT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6809870 29 +  69701581 A----------GGGC--ATGA------A-A-ATAG----GG----ATTTCC-AAT-AGT
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1092830 34 -   1523678 A----------GGAC--ATGG------A-A----ATAGAAATTCCCTTCCC-AAT-AGT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                 9981 29 +     41958 G----------TGCT--ATTA------A-GAGG-G----CT----ATTGCA-ATT-AAA
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 71527  5 +    116680 -----------------------------------------------------AG-AAT
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 10 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118143 11 -    156842 C----------GGAC--ATGG------A-A-----------------------------
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 2
s Tapirus_terrestris.TapTer_scaffold_755                    386596 11 +    539355 A----------GGAC--ATGG------A-A-----------------------------
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 2
s Tarsius_lariang.k141_2201908                               25831 30 +     70052 A----------GGTC--AAGG------A-A----GTAAGGA----ATTGCC-AGT-AGC
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                 663 30 -     16117 A----------GGTC--ATGG------A-A----GTAAGGA----ATTGCC-AGT-AGC
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186427937 34 + 186847797 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAT-AGT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   3765  5 +      8208 -----------------------------------------------------ag-cac
i Tolypeutes_matacus.TolMat_scaffold_228639              I 1 I 1614
s Tonatia_saurophila.TonSau_scaffold_294                     80328 12 +    610378 ---------------------------------------------ATTTCC-AAT-AGT
i Tonatia_saurophila.TonSau_scaffold_294                 I 11 C 0
s Trachypithecus_auratus.k141_722599                         10339 34 -     20410 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAA-AGT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    14533 34 +     15221 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAA-AGT
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                       10440 34 +     19930 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAA-AGT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       6867 34 -     19997 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAA-AGT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            46991 34 -     60166 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAA-AGT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        14462 34 -     27529 A----------GGAC--ATGG------A-A----GTACGCATTCTCTTCCC-AAA-AGT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     14406 34 -     18194 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAA-AGT
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           8134 34 -     21137 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAA-AGT
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    6837 34 -     10723 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAA-AGT
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         5993 34 +      9834 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAA-AGT
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        24306 34 +     32220 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAA-AGT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5938408 34 +   6242583 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAA-AGT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        7660 34 +     20839 A----------GGAC--ATGG------A-A----GTACGCATTCCCTTCCC-AAA-AGT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2155064 27 +   4065304 g----------ggac--acag------a-a-ggaG----AC----ATTTCC-AAT---T
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     8712 27 -     10553 G----------GGAC--ACGG------A-AGG-AG----AC----ATTTCC-AAT---T
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   52702 30 -     77625 A----------GGAG--ATGA------A-AGGGAT----AT----CTATCC-AGG-GAT
i Uropsilus_gracilis.UroGra_scaffold_12083               I 2 C 0
s Ursus_maritimus.KK499267.1                               4849814 29 -   5085361 A----------GGAC--ATGG------A-A-ATAG----AA----ATTTCC-AGT-AGC
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  10902 26 +     50397 A----------GGAC--ATGG------T-A----G----GA----ATTCCC-AAT-AGT
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             10961 26 +     24756 A----------GGAC--ATGG------T-A----G----GA----ATTCCC-AAT-AGT
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371255 16 -   5488506 A----------GGAC--ATGG------A-A-ATAG----G-------------------
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10169 29 -     43706 A----------GGAC--ACGG------A-A-ATAG----AA----ATTTCC-AGT-AGT
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        23806 39 -     24430 AAGATATGCAAAAGC--ATAG------A-GG-TAG----AA----AT-TTCTAAT-GGT
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          4546 27 +     86975 A----------GGAC--ATGG------A-A-ATAG----AA----ATTTCC-ACT-A--
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      14396 26 +     63895 A----------GGAT--ATGG------A-AG-AAG----GA----AT-TCC-CCA---T
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50341  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352  0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            62473  5 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Colobus_guereza.LG01                                   199948958  0 + 200372422 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    136758  0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6161 20 +     62944 AA----GAA----------------TT----------------TC---CAA-T---A-TT--T-T--T----------------T
s Acinonyx_jubatus.LLWD01001279.1                           826735 22 -   1699592 AG----ACA----------------TC----------------TC---TAA-C---T-TT--G-T--A--------------TAG
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     69971 16 +     87051 AG----GAA----------------TC----------------TC---TA--A---C-AT--T----------------------
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 47 I 423
s Ailuropoda_melanoleuca.LNAT01000098.1                    9509983 22 -  29979442 AG----AAA----------------TT----------------TC---CAA-C---T-TT--G-T--A--------------TAG
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             78754 22 -    347723 AG----AAA----------------TG----------------TC---CAA-C---T-TT--G-T--A--------------TAG
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     74112 24 -     89534 A-GTGGGAA----------------TC----------------TC---TG--G---C-CT--T-T--T--------------GTG
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14078 21 -     52922 AG----GAA----------------TT----------------TC---TGA-T---T-TG--T-T-GT----------------T
i Allenopithecus_nigroviridis.k141_3361533               C 0 I 11
s Allochrocebus_lhoesti.k141_4309873                         14020 18 -     28001 AG----GAA----------------TT----------------TC---CGA-T---T-TA--T-T--------------------
i Allochrocebus_lhoesti.k141_4309873                     C 0 I 8
s Allochrocebus_preussi.k141_1442296                          4516 18 -     18505 AG----GAA----------------TT----------------TC---CGA-T---T-TT--T-T--------------------
i Allochrocebus_preussi.k141_1442296                     C 0 I 8
s Allochrocebus_solatus.k141_166128                           5369 18 -     12518 AG----GAA----------------TT----------------TC---CGA-T---T-TT--T-T--------------------
i Allochrocebus_solatus.k141_166128                      C 0 I 8
s Alouatta_belzebul.k141_3238538                              2822 19 -     27731 AG----GAA----------------TT----------------TC---CAA-C---A-T---T-T--T----------------T
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                2953 19 +      3134 AG----GAA----------------TT----------------TC---CAA-C---A-T---T-T--T----------------T
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               3081 19 -     45847 AG----GAA----------------TT----------------TC---CAA-C---A-T---T-T--T----------------T
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                24291 19 +     25266 AG----GAA----------------TT----------------TC---CAA-C---A-T---A-T--T----------------T
i Alouatta_juara.k141_1509701                            I 33 C 0
s Alouatta_macconnelli.k141_918386                              16 19 -      9457 AG----GAA----------------TT----------------TC---CAA-C---A-T---A-T--T----------------T
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_3472759                            17587 19 -     18578 AG----GAA----------------TT----------------TC---CAA-C---A-T---A-T--T----------------T
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              2986 19 +     47717 AG----GAA----------------TT----------------TC---CAA-C---A-T---T-T--T----------------T
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             3086 19 -      3544 AG----GAA----------------TT----------------TC---CAA-C---A-T---A-T--T----------------T
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             14310 19 +     50774 AG----GAA----------------TT----------------TC---CAA-C---A-T---A-T--T----------------T
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184484 22 +    412891 AT----GGA----------------TT----------------CC---CAT-C---T-TT--G-T--A--------------TAG
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  14931 19 -     33861 AG----GAA----------------TT----------------TC---CAA-C---A-T---T-T--T----------------T
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            14951 19 -     34016 AG----GAA----------------TT----------------TC---CAA-C---A-T---T-T--T----------------T
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297348 19 -   5030052 AG----GAA----------------TT----------------TC---CAA-C---A-T---T-T--T----------------T
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             14953 19 -     34685 AG----GAA----------------TT----------------TC---CAA-C---A-T---T-T--T----------------T
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28077 19 -     47192 AG----GAA----------------TT----------------TC---CAA-C---A-T---T-T--T----------------T
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      11323 22 +     20879 AG----GGA----------------TT----------------TC---CA-AC---T-GT--T-T--T--------------TTG
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       10809 24 +     14667 GA----GAA----------------TT----------------TC---TAA-T---T-TT--T-T--T------------TCCTT
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3891 22 +     43469 AC----AGA----------------TT----------------TC---CAA-C---T-TT--G-T--A--------------CAG
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  53206 20 -     92717 GG----GAA----------------TT----------------TC---TAA-C---T-TT--T-T--G----------------G
i Avahi_laniger.k141_765380                              C 0 I 1
s Avahi_peyrierasi.k141_1424874                              53833 20 +     85213 GG----GAA----------------TT----------------TC---TAA-C---T-TT--T-T--G----------------G
i Avahi_peyrierasi.k141_1424874                          C 0 I 1
s Callibella_humilis.k141_1278103                             4685 19 -     10423 AG----GAA----------------TT----------------TC---CGA-C---A-T---T-T--T----------------T
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             24159 19 +     31915 GG----GAA----------------TT----------------TC---TGA-C---A-T---T-T--T----------------T
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            4651 19 +      5267 AG----GAA----------------TT----------------TC---TGA-C---A-T---T-T--T----------------T
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23589865 19 - 189096842 AG----GAA----------------TT----------------TC---TGA-C---A-T---T-T--T----------------T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             11395 19 -     12001 AG----GAA----------------TT----------------TC---TGA-C---A-T---T-T--T----------------T
i Callithrix_kuhlii.k119_1164682                         C 0 I 1
s Camelus_bactrianus.KN276810.1                           10001785 19 -  17673402 -------AA----------------TT----------------TC---CAG-C---T-TT--T-T--A--------------CAG
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334243 19 -   7040546 -------AA----------------TT----------------TC---CAG-C---T-TT--T-T--A--------------CAG
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  402526 19 -   1652518 -------AA----------------TT----------------TC---CAG-C---T-TT--T-T--A--------------CAG
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17798583 22 -  60362399 AG----AAA----------------TT----------------CC---CAG-C---T-TT--G-C--A--------------TAG
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184640 22 -    185531 AG----AAA----------------TT----------------CC---CAG-C---T-TT--G-C--A--------------TAG
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034026 22 -   9314153 AG----AAA----------------TT----------------CC---CAG-C---T-TT--G-C--A--------------TAG
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17958291 22 -  59632846 AG----AAA----------------TT----------------CC---CAG-C---T-TT--G-C--A--------------TAG
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18499803 22 +  63665305 AG----AAA----------------TT----------------CC---CAG-C---T-TT--G-C--A--------------TAG
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007247396.1                           200838 23 +    308752 AG----GAA----------------TT----------------Tctatcgt-t---t-tt--t-t--t----------------t
i Carlito_syrichta.NW_007247396.1                        C 0 I 6
s Carollia_perspicillata.CarPer_scaffold_92756                4254 22 -     11696 AC----AGA----------------TT----------------TC---CAA-C---T-TT--G-T--A--------------TAG
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     92413 22 +    217609 AG----GAG----------------TT----------------TC---CAG-C---T-TT--G-T--G--------------AAG
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          9310 19 -     11392 AG----GAA----------------TT----------------TC---CGA-C---A-T---T-T--T----------------T
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               5408 19 -      7577 AG----GAA----------------TT----------------TC---CGA-C---A-T---T-T--T----------------T
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25651460 19 +  26074798 AG----GAA----------------TT----------------TC---CAA-C---A-T---T-T--T----------------T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_398305                                 1036 19 +      1777 AG----GAA----------------TT----------------TC---CAA-C---A-T---T-T--T----------------T
i Cebus_olivaceus.k141_398305                            C 0 C 0
s Cebus_unicolor.k141_544048                                 49369 19 -     74725 AG----GAA----------------TT----------------TC---CAA-C---A-T---T-T--T----------------T
i Cebus_unicolor.k141_544048                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         4853 13 +     31688 AG----GAA----------------TT----------------TCTATC------------------------------------
i Cephalopachus_bancanus.k141_1423433                    C 0 I 8
s Ceratotherium_simum.JH767749.1                          12230829 22 +  27778364 AG----GAA----------------TT----------------TC---CCA-C---T-TA--G-T--A--------------TAG
i Ceratotherium_simum.JH767749.1                         I 2 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1856 22 -     25243 AG----GAA----------------TT----------------TC---CCA-C---T-TA--G-T--A--------------TAG
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 2 C 0
s Cercocebus_atys.KQ010504.1                               4475031 20 +   4669795 AG----GAA----------------TT----------------Tc---cga-t---t-tt--t-t--t----------------t
i Cercocebus_atys.KQ010504.1                             C 0 I 11
s Cercocebus_chrysogaster.k141_393940                        13576 20 -     19203 AG----GAA----------------TT----------------TC---CGA-T---T-TT--T-T--T----------------T
i Cercocebus_chrysogaster.k141_393940                    C 0 I 8
s Cercocebus_lunulatus.k141_3846941                           8002 20 +      8260 AG----GAA----------------TT----------------TC---CGt-t---t-tt--t-t--t----------------t
i Cercocebus_lunulatus.k141_3846941                      C 0 I 235
s Cercocebus_torquatus.k141_3057011                           8228 20 +     27781 AG----GAA----------------TT----------------TC---CGA-T---T-TT--T-T--T----------------T
i Cercocebus_torquatus.k141_3057011                      C 0 I 8
s Cercopithecus_ascanius.k141_1024104                         8388 21 -     20310 AG----GAA----------------TT----------------TC---TGA-T---T-TT--T-TT-T----------------T
i Cercopithecus_ascanius.k141_1024104                    C 0 I 8
s Cercopithecus_cephus.k141_1078548                          11367 21 +     29689 AG----GAA----------------TT----------------TC---TGA-T---T-TT--T-T-GT----------------T
i Cercopithecus_cephus.k141_1078548                      C 0 I 8
s Cercopithecus_diana.k141_2427854                            5796 14 +      9989 AG----GAA----------------TT----------------TC---CGA-T---T----------------------------
i Cercopithecus_diana.k141_2427854                       C 0 I 13
s Cercopithecus_hamlyni.k141_187466                          14046 21 -     27936 AG----GAA----------------TT----------------TC---CGA-T---T-TT--T-T-GT----------------T
i Cercopithecus_hamlyni.k141_187466                      C 0 I 8
s Cercopithecus_lowei.k141_1854285                            2912 21 -     17152 AG----GAA----------------TT----------------TC---TGA-T---T-TT--T-T-GT----------------T
i Cercopithecus_lowei.k141_1854285                       C 0 I 8
s Cercopithecus_albogularis.ctg5                                38816446 22 +  39242232 AG----GAA----------------TT----------------TC---TGA-T---T-TT--TTT-GT----------------T
i Cercopithecus_albogularis.ctg5                               C 0 I 8
s Cercopithecus_mona.ctg39                                21222141 21 -  21565898 AG----GAA----------------TT----------------TC---TGA-T---T-TT--T-T-GT----------------T
i Cercopithecus_mona.ctg39                               C 0 I 8
s Cercopithecus_neglectus.k141_2526306                       39259 21 -     53127 AG----GAA----------------TT----------------TC---TGA-T---T-TT--T-TT-T----------------T
i Cercopithecus_neglectus.k141_2526306                   C 0 I 8
s Cercopithecus_nictitans.k141_3278028                        6527 21 +      7159 AG----GAA----------------TT----------------TC---TGA-T---T-TT--T-T-GT----------------T
i Cercopithecus_nictitans.k141_3278028                   C 0 I 8
s Cercopithecus_petaurista.k141_807961                       14062 21 -     27947 AG----GAA----------------TT----------------TC---TGA-T---T-TT--T-T-GT----------------T
i Cercopithecus_petaurista.k141_807961                   C 0 I 8
s Cercopithecus_pogonias.k141_822820                         14035 21 +     17596 AG----GAA----------------TT----------------TC---TGA-T---T-TT--T-T-GT----------------T
i Cercopithecus_pogonias.k141_822820                     C 0 I 8
s Cercopithecus_roloway.k141_2567858                          3269 14 +     26000 AG----GAA----------------TT----------------TC---CGA-T---T----------------------------
i Cercopithecus_roloway.k141_2567858                     C 0 I 13
s Chaetophractus_vellerosus.ChaVel_scaffold_713168            1852 22 -      2554 AT----GAA----------------CT----------------TC---AGA-C---T-TT--G-C--A--------------TAG
i Chaetophractus_vellerosus.ChaVel_scaffold_713168       I 1637 C 0
s Cheirogaleus_major.k141_333249                             20584 20 -     52598 GG----GAA----------------TT----------------TC---TAA-C---T-TT--C-C--T----------------G
i Cheirogaleus_major.k141_333249                         C 0 I 1
s Cheirogaleus_medius.k141_1055463                           15949 20 +     57038 GG----GAA----------------TT----------------TC---TAA-C---T-TT--T-C--T----------------G
i Cheirogaleus_medius.k141_1055463                       C 0 I 1
s Chiropotes_albinasus.k141_2813271                          10568 19 +     11226 AG----GAA----------------TT----------------TC---CGA-C---A-T---T-T--T----------------T
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18428020 18 -  18827391 AG----GAA----------------TT----------------TC---CGA-T---T-TT--T-T--------------------
i Chlorocebus_aethiops.ctg25                             C 0 I 8
s Chlorocebus_pygerythrus.k141_1025673                       14457 18 -     50209 AG----GAA----------------TT----------------TC---CGA-T---T-TT--T-T--------------------
i Chlorocebus_pygerythrus.k141_1025673                   C 0 I 8
s Chlorocebus_sabaeus.CM001947.1                         135421457 18 + 135778131 AG----GAA----------------TT----------------Tc---cga-t---t-tt--t-t--------------------
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 8
s Choloepus_didactylus.ChoDid_scaffold_45914                 17273 22 +     19366 AG----GAA----------------TT----------------TC---CGA-C---T-TT--G-C--A--------------TGG
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            172370 22 +    839153 AG----GAA----------------TT----------------TC---TGA-C---T-TT--G-C--A--------------TGG
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1909973 19 +   2368649 AA----GAA----------------TT----------------TC---CGA-T---T--T--T-T--T----------------T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_polykomos.k141_906115                              36511 19 +     84244 AA----GAA----------------TT----------------TC---CGA-T---T--T--T-T--T----------------T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17547504 22 -  53390261 AG----AGA----------------TT----------------TC---CAC-T---T-TT--G-T--A--------------TAC
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          13718 22 -     20389 AG----GAA----------------TT----------------TC---TAA-C---T-TT--G-T--A--------------TAG
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 49554 21 +     63868 AG----GAC----------------TC----------------TC---TA--A---C-TT--T-T--T--------------TTG
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11667033 16 + 224834208 AG----GAA----------------GC----------------TC---TA--A---C-TT--T----------------------
i Cricetulus_griseus.LT883664.1                          C 0 I 4
s Crocidura_indochinensis.CroInd_scaffold_37019               2410 12 -     19598 AG----GCA----------------TT----------------TC---AAA----------------------------------
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 I 9
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27889 22 -     87169 AG----AAA----------------TT----------------TC---CAA-C---T-TT--G-T--A--------------TAG
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    836601 21 +   1526836 AG----GAA----------------TT----------------AC---CA--T---T-TT--T-T--T--------------GCA
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12536808 20 -  12879189 GG----GAA----------------TT----------------TC---TAA-C---T-TT--T-T--T----------------T
i Daubentonia_madagascariensis.ctg71                     C 0 I 1
s Desmodus_rotundus.KZ672289.1                             8629268 22 +  20541912 AC----GGA----------------TT----------------TC---CAA-C---T-TT--G-T--A--------------CAG
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672680 22 +   1390856 AG----GAA----------------TT----------------TC---CCA-C---T-TA--G-T--A--------------TAG
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 2 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    5432 22 +    198055 AG----GAA----------------TT----------------TC---CCA-C---T-TA--G-T--A--------------TAG
i Diceros_bicornis.DicBicMic_scaffold_5955               I 2 C 0
s Echinops_telfairi.JH980293.1                            48779828 22 + 111700974 TG----GAA----------------TT----------------TG---CAA-C---T-TT--G-T--T--------------TAG
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.KE759718.1                                   9928 22 +     11740 GG----AAA----------------TT----------------TC---CAA-C---T-TT--G-T--A--------------TAG
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1097125 22 +  10337057 AG----GAG----------------TT----------------TC---CGA-C---T-TT--G-C--C--------------TTG
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          90530  4 +    110024 AG----GA-----------------------------------------------------------------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 9
s Ellobius_talpinus.LOJH01109367.1                             711  4 +      6299 AG----GA-----------------------------------------------------------------------------
i Ellobius_talpinus.LOJH01109367.1                       C 0 I 9
s Enhydra_lutris.KZ291758.1                               16328721 22 -  41312741 AG----AAA----------------TT----------------TC---CAA-C---T-TT--G-T--A--------------TGG
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144852 22 -  14770903 AT----GAC----------------TT----------------TC---CAA-C---T-TT--G-T--A--------------TAG
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1282744 22 +   4378816 AG----GAA----------------TT----------------TC---CAA-C---T-TA--G-T--G--------------TAG
i Equus_asinus.JREZ01000139.1                            I 2 C 0
s Equus_caballus.CM000403.2                               18530565 22 -  39960074 AG----GAA----------------TT----------------TC---CAA-C---T-TA--G-T--G--------------TAA
i Equus_caballus.CM000403.2                              I 2 C 0
s Equus_przewalskii.KK951119.1                               32580 22 +    498745 AG----GAA----------------TT----------------TC---CAA-C---T-TA--G-T--G--------------TAA
i Equus_przewalskii.KK951119.1                           I 2 C 0
s Erythrocebus_patas.Contig38                             21204627 18 -  21539334 AG----GAA----------------TT----------------TC---CGA-T---T-TT--T-T--------------------
i Erythrocebus_patas.Contig38                            C 0 I 9
s Eulemur_albifrons.k141_342033                              13309 20 -     14127 GG----GAA----------------TT----------------TC---TAA-C---T-TT--T-T--T----------------G
i Eulemur_albifrons.k141_342033                          C 0 I 1
s Eulemur_collaris.k141_377015                                6009 20 -     16928 GG----GAA----------------TT----------------TC---TAA-C---T-TT--T-T--T----------------G
i Eulemur_collaris.k141_377015                           C 0 I 1
s Eulemur_coronatus.k141_885031                              15036 20 -     25546 GG----GAA----------------TT----------------TC---TAA-C---T-TT--T-T--T----------------G
i Eulemur_coronatus.k141_885031                          C 0 I 1
s Eulemur_flavifrons.k141_1184614                            12245 20 +     26330 GG----GAA----------------TT----------------TC---TAA-C---T-TT--T-T--T----------------G
i Eulemur_flavifrons.k141_1184614                        C 0 I 1
s Eulemur_fulvus.k141_544389                                 13473 20 +     23973 GG----GAA----------------TT----------------TC---TAA-C---T-TT--T-T--T----------------G
i Eulemur_fulvus.k141_544389                             C 0 I 1
s Eulemur_macaco.k141_1562045                                12242 20 +     75513 GG----GAA----------------TT----------------TC---TAA-C---T-TT--T-T--T----------------G
i Eulemur_macaco.k141_1562045                            C 0 I 1
s Eulemur_mongoz.k141_232305                                 10168 20 +     97555 GG----GAA----------------TT----------------TC---TAA-C---T-TT--T-T--T----------------G
i Eulemur_mongoz.k141_232305                             C 0 I 1
s Eulemur_rubriventer.k141_571033                            13099 20 +     26496 GG----GAA----------------TT----------------TC---TAA-C---T-TT--T-T--T----------------G
i Eulemur_rubriventer.k141_571033                        C 0 I 1
s Eulemur_rufus.k141_1476633                                  3709 20 -     17153 GG----GAA----------------TT----------------TC---TAA-C---T-TT--T-T--T----------------G
i Eulemur_rufus.k141_1476633                             C 0 I 1
s Eulemur_sanfordi.k141_1122526                              13284 20 +    111500 GG----GAA----------------TT----------------TC---TAA-C---T-TT--T-T--T----------------G
i Eulemur_sanfordi.k141_1122526                          C 0 I 1
s Felis_catus.CM001381.2                                  20236386 22 + 206538554 AG----ACA----------------TT----------------TC---TAA-C---T-TT--G-T--A--------------TAG
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195229 22 + 205367284 AG----ACA----------------TT----------------TC---TAA-C---T-TT--G-T--A--------------TAG
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  8743 22 -     36744 AG----ACA----------------TT----------------TC---TAA-C---T-TT--G-T--A--------------TAG
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     425761 25 -    453645 GG----GAA----------------TT----------------TC---TAA-TT--T-TT--T-T--T------------TCCTT
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             3468 25 +     11339 GG----GAA----------------TT----------------TC---TAA-TT--T-TT--T-T--T------------TCCTT
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                             771 25 +     41679 GG----GAA----------------TT----------------TC---TAA-TT--T-TT--T-T--T------------TCCTT
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840                643 22 -      9135 AG----AAA----------------TT----------------TC---CAA-C---T-TT--T-T--T--------------ATG
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              15416 20 -     32273 AA----GAA----------------TT----------------TC---CAA-T---A-TT--T-T--T----------------T
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186337562 20 + 186649187 AA----GAA----------------TT----------------TC---CAA-T---A-TT--T-T--T----------------T
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6356 20 -     19426 GG----GAA----------------TT----------------TC---TAA-C---T-TT--T-T--T----------------G
i Hapalemur_alaotrensis.k141_170648                      C 0 I 1
s Hapalemur_gilberti.k141_488810                             11505 20 -     15286 GG----GAA----------------TT----------------TC---TAA-C---T-TT--T-T--T----------------G
i Hapalemur_gilberti.k141_488810                         C 0 I 1
s Hapalemur_griseus.k141_1511508                             13144 20 +     18253 GG----GAA----------------TT----------------TC---TAA-C---T-TT--T-T--T----------------G
i Hapalemur_griseus.k141_1511508                         C 0 I 1
s Hapalemur_meridionalis.k141_248335                         13245 20 -     41752 GG----GAA----------------TT----------------TC---TAA-A---T-TT--T-T--T----------------G
i Hapalemur_meridionalis.k141_248335                     C 0 I 1
s Hapalemur_occidentalis.k141_907772                         13082 20 -     16460 GG----GAA----------------TT----------------TC---TAA-C---T-TT--T-T--T----------------G
i Hapalemur_occidentalis.k141_907772                     C 0 I 1
s Helogale_parvula.HelPar_flattened_line_2585               241724 22 +    327341 AG----AAA----------------TT----------------TC---CAA-A---T-TT--G-T--A--------------TAC
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_596025                 186 22 +       452 AG----GAA----------------CT----------------GC---CAA-C---T-TT--C-T--A--------------TAG
i Heterohyrax_brucei.HetBruBak_scaffold_596025           C 0 C 0
s Hoolock_leuconedys.ctg274                                    434229 20 +    630532 AG----GAA----------------TT----------------TC---CAA-T---A-TT--T-T--T----------------T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  43884 22 +     55795 AA----AAA----------------TT----------------TC---CAA-C---T-TT--G-T--G--------------TAG
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_232023                                1995 20 -     12752 AG----GAA----------------TT----------------TC---CAA-T---A-TT--T-T--T----------------T
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                               2039 20 +     14092 AG----GAA----------------TT----------------TC---CAA-T---A-TT--T-T--T----------------T
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189542822 20 - 191637585 AG----GAA----------------TT----------------TC---CAA-T---A-TT--T-T--T----------------T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3335717 20 -  11177569 AG----GAA----------------TT----------------TC---CAA-T---A-TT--T-T--T----------------T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7519447 36 -   7955117 AG----GAa----------------tt----------------tc---ca-ac---t-ct--t-t--tttttttgtgtgtgtgtg
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   22027 20 +     31101 GG----GAA----------------TT----------------TC---TAA-C---T-TT--T-T--G----------------G
i Indri_indri.k141_3655594                               C 0 I 1
s Lasiurus_borealis.LasBor_scaffold_32767                    13260 22 -     42476 CT----GAC----------------TT----------------TC---CAA-C---T-TT--G-T--A--------------CAG
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15523591 20 -  30322482 GG----GAA----------------TT----------------TC---TAA-C---T-TT--T-T--T----------------G
i Lemur_catta.scaffold_24                                C 0 I 1
s Leontocebus_fuscicollis.k141_1820339                        6950 19 +     64341 AG----GAA----------------TT----------------TC---CGA-C---A-T---T-T--T----------------T
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           4274 19 +      4941 AG----GAA----------------TT----------------TC---CGA-C---A-T---T-T--T----------------T
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        6992 19 +     35603 AG----GAA----------------TT----------------TC---CGA-C---A-T---T-T--T----------------T
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    28460 19 +     38576 AG----GAA----------------TT----------------TC---CGA-C---A-T---T-T--T----------------T
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         25157 19 +     66356 AG----GAA----------------TT----------------TC---CGA-C---A-T---T-T--T----------------T
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         10483 20 -     23766 GG----GAA----------------TT----------------TC---TAA-C---T-TT--T-C--T----------------G
i Lepilemur_ankaranensis.k141_596936                     C 0 I 1
s Lepilemur_dorsalis.k141_577674                             28545 20 +     45836 GG----GAA----------------TT----------------TC---TAA-C---T-TT--T-C--T----------------G
i Lepilemur_dorsalis.k141_577674                         C 0 I 1
s Lepilemur_ruficaudatus.k141_121139                          1084 20 +     25010 GG----GAA----------------TT----------------TC---TAA-C---T-TT--T-C--T----------------G
i Lepilemur_ruficaudatus.k141_121139                     C 0 I 1
s Lepilemur_septentrionalis.k141_185316                      26481 20 +     54090 GG----GAA----------------TT----------------TC---TAA-C---T-TT--T-C--T----------------G
i Lepilemur_septentrionalis.k141_185316                  C 0 I 1
s Leptonychotes_weddellii.KB714746.1                       3042258 13 +   3914936 ------------------------------------------------CAA-C---T-TT--C-T--A--------------TAG
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     5659 19 -     14121 CA----GAA----------------TT----------------TC---TAA-C---TATT--T-T--------------------
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 2
s Lophocebus_aterrimus.ctg367                              1436578 20 +   1826925 AG----GAA----------------TT----------------TC---CGA-T---T-TT--T-G--T----------------T
i Lophocebus_aterrimus.ctg367                            C 0 I 8
s Loris_lydekkerianus.k141_2539221                            5143 24 +     11245 AG----GAA----------------TT----------------TC---TAA-T---T-TT--T-T--T------------CCCTT
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1003993 24 +   6120653 AG----GAA----------------TT----------------TC---TAA-T---T-TT--T-T--T------------CCCTT
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17954531 22 -  59628241 AG----AAA----------------TT----------------CC---CAG-C---T-TT--G-C--A--------------TAG
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               6386 22 +     40492 AG----GAA----------------TT----------------TC---CTA-T---T-TT--TTT-GT----------------T
i Macaca_arctoides.k141_2326796                          C 0 I 8
s Macaca_assamensis.Contig5                               59675647 20 +  60120075 AG----GAA----------------TT----------------TC---CTA-T---T-T---TTG--T----------------T
i Macaca_assamensis.Contig5                              C 0 I 8
s Macaca_cyclopis.k119_18836                                 12159 19 -     26193 AG----GAA----------------TT----------------TC---CTA-TTT-T-TT--T----------------------
i Macaca_cyclopis.k119_18836                             C 0 I 10
s Macaca_fascicularis.k141_814140                            79942 22 -    114318 AG----GAA----------------TT----------------TC---CTA-TTT-T-TT--T-G--T----------------T
i Macaca_fascicularis.k141_814140                        C 0 I 8
s Macaca_fuscata.k119_255327                                  5633 20 -     23192 AG----GAA----------------TT----------------TC---CTA-TTTTT-TT--T----------------------
i Macaca_fuscata.k119_255327                             C 0 I 10
s Macaca_leonina.k141_3550399                                15104 20 -     29190 AG----GAA----------------TT----------------TC---CTA-T---T-TT--T-G--T----------------T
i Macaca_leonina.k141_3550399                            C 0 I 8
s Macaca_maura.k141_2733130                                  23669 20 +     37952 AG----GAA----------------TT----------------TC---CTA-T---T-TT--T-T--T----------------T
i Macaca_maura.k141_2733130                              C 0 I 8
s Macaca_mulatta.NC_041758.1                             186838757 19 + 187317192 Ag----gaa----------------tt----------------tc---cta-t-ttt-tt--t----------------------
i Macaca_mulatta.NC_041758.1                             C 0 I 10
s Macaca_nemestrina.KQ007038.1                            25457321 20 -  25927173 Ag----gaa----------------tt----------------tc---cta-t---t-tt--t-t--t----------------t
i Macaca_nemestrina.KQ007038.1                           C 0 I 8
s Macaca_nigra.k141_1655396                                  79520 20 +     89720 AG----GAA----------------TT----------------TC---CTA-T---T-TT--T-T--T----------------T
i Macaca_nigra.k141_1655396                              C 0 I 5
s Macaca_radiata.k141_3680011                                 6518 20 +     20474 AG----GAA----------------TT----------------TC---CTA-T---T-T---TTT--T----------------T
i Macaca_radiata.k141_3680011                            C 0 I 8
s Macaca_siberu.k141_635500                                   6318 20 -     14993 AG----GAA----------------TT----------------TC---CTA-T---T-TT--T-T--T----------------T
i Macaca_siberu.k141_635500                              C 0 I 8
s Macaca_silenus.Contig273                                  329184 20 -    668171 AG----GAA----------------TT----------------TC---CTA-T---T-TT--T-T--T----------------T
i Macaca_silenus.Contig273                               C 0 I 8
s Macaca_thibetana.k99_256239                                 4633 21 -     24072 AG----GAA----------------TT----------------TC---CTA-T---T-TT--TTG--T----------------T
i Macaca_thibetana.k99_256239                            C 0 I 8
s Macaca_tonkeana.k141_1498238                               25257 17 -     45290 AG----GAA----------------TT----------------TC---CTA-T---T-TT--T----------------------
i Macaca_tonkeana.k141_1498238                           C 0 I 10
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90025 22 +     94391 GG----GAA----------------TT----------------TC---CAA-C---T-TT--A-T--A--------------TAG
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23936852 20 -  24302211 AG----GAA----------------TT----------------TC---TGA-T---T-TT--T-T--T----------------T
i Mandrillus_leucophaeus.scaffold280                     C 0 I 8
s Mandrillus_sphinx.Contig270                               350981 20 +    752769 AG----GAA----------------TT----------------TC---TGA-T---T-TT--T-T--T----------------T
i Mandrillus_sphinx.Contig270                            C 0 I 8
s Marmota_marmota.CZRN01000018.1                          33101757 38 -  40650429 AG----GAATTTCTAATAGCAGGAATT----------------TC---CA-ac---t-ca--t-t--ttt--------------g
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         9733 22 -    207569 AG----GAA----------------TT----------------TC---CAA-C---T-TT--G-T--A--------------GGG
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              9438 22 +     13704 AG----AAA----------------TT----------------TC---CAA-C---T-TT--G-T--A--------------TAC
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 32229 16 +    140813 AG----GAA----------------TC----------------AC---TA--G---C-TT--T----------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 5
s Mesocricetus_auratus.KB708134.1                         12181716 16 -  29670104 AG----GAA----------------TT----------------TG---TA--A---C-TT--T----------------------
i Mesocricetus_auratus.KB708134.1                        C 0 I 5
s Mico_argentatus.k141_1239457                                5225 19 -      7380 AG----GAA----------------TT----------------TC---CGA-C---A-T---T-T--T----------------T
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               4298 19 +     18990 AG----AAA----------------TT----------------TC---CGA-C---A-T---T-T--T----------------T
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      5237 19 -      7356 AG----GAA----------------TT----------------TC---CGA-C---A-T---T-T--T----------------T
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18291006 20 -  93316391 GG----GAA----------------TG----------------TC---TAA-C---T-TT--T-C--T----------------G
i Microcebus_murinus.CM007674.1                          C 0 I 1
s Microgale_talazaci.MicTal_scaffold_6613                    21557 21 -    145209 TG----GAA----------------T-----------------AG---CAA-C---T-TT--G-T--T--------------TAG
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                14809 22 -     19307 AC----GGA----------------TT----------------TC---CAA-C---T-TC--G-T--A--------------CAG
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850045 22 +   8254450 AT----GAA----------------TG----------------TC---CAA-C---T-TT--G-T--A--------------TAG
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             33722 22 +     64694 AT----GAA----------------TG----------------TC---CAA-C---T-TT--G-T--A--------------TAG
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           8572 21 -     28506 AG----GAA----------------TT----------------TC---TGA-T---T-TT--T-T-GT----------------T
i Miopithecus_ogouensis.k141_534055                      C 0 I 8
s Mirounga_angustirostris.MirAng_flattened_line_93702         5126 13 -      8324 ------------------------------------------------CAA-C---T-TT--C-T--A--------------TAG
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      8550 20 -     37649 GG----GAA----------------TT----------------TC---TAA-C---T-TT--T-C--T----------------G
i Mirza_zaza.k141_952172                                 C 0 I 1
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140753 22 -    366855 AT----GAA----------------TG----------------TC---CAA-C---T-TT--G-T--A--------------CAG
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   34837 22 +     37127 AG----AAA----------------TT----------------TC---CAA-A---T-TT--G-T--A--------------TAC
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5916 22 +     14753 AT----GAC----------------TT----------------TC---CAA-C---T-TT--G-T--A--------------CAG
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84360835 15 - 120012414 A-----GTA----------------TT----------------TC---TA--A---C-CT--C----------------------
i Mus_caroli.LT608237.1                                  C 0 I 4
s Mus_musculus.chr8                                       87649836 15 - 129401213 A-----GTA----------------TT----------------TC---TA--G---C-CT--T----------------------
i Mus_musculus.chr8                                      C 0 I 4
s Mus_pahari.LT608297.1                                   31354491 15 -  89631738 A-----GAA----------------TC----------------TC---TA--A---C-CT--T----------------------
i Mus_pahari.LT608297.1                                  C 0 I 4
s Mus_spretus.CM004101.1                                  90751896 15 - 130317789 A-----GTA----------------TT----------------TC---TA--G---C-CT--T----------------------
i Mus_spretus.CM004101.1                                 C 0 I 4
s Mustela_putorius.JH418006.1                               300622 22 -  14710649 AG----AAA----------------TT----------------TC---CAA-C---T-TT--G-T--A--------------TGG
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                279089 22 -  10118263 AT----GAC----------------TT----------------TC---CAA-C---T-TT--G-T--A--------------TAG
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1586782 22 -   6019432 AT----GAC----------------TT----------------TC---CAA-C---T-TT--G-T--A--------------TAG
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902854 22 -   4330536 AT----GAC----------------TT----------------TC---CAA-C---T-TT--G-T--A--------------TAG
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_28916                        33409 17 +     33610 AT----tgc----------------ta-------------gggtc---caa-c---c----------------------------
i Myotis_myotis.MyoMyo_scaffold_28916                    C 0 N 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              188172 22 +    196477 AG----GAA----------------TT----------------TC---CAA-C---T-TC--A-C--A--------------TAG
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2033335 22 -   3037898 GG----GAA----------------TC----------------AC---ta--g---t-tt--ttt--ttt--------------a
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               14567 21 +     21681 AG----GAA----------------TT----------------TC---CAA-TT--T--TT-T-T--T----------------T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306380 13 +  31847680 ------------------------------------------------CAA-C---T-TT--C-T--A--------------TAG
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9148785 22 -   9404916 AG----AAA----------------TT----------------CC---CAG-T---T-TT--G-C--A--------------TAG
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102578972 24 - 196305487 AG----GAA----------------TT----------------TC---TAA-T---A-TT--T-T--T------------CCCTT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_771082                               817 24 -      2667 AG----GAA----------------TT----------------TC---TAA-T---A-TT--T-T--T------------CCCTT
i Nycticebus_coucang.k141_771082                         C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749393 24 + 199412804 AG----GAA----------------TT----------------GC---TAA-T---T-TT--T-T--T------------CCCTT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1362810 18 +   3988456 CA----TAA----------------TT----------------TC---AAA-C---T-TC--T-G--------------------
i Ochotona_princeps.JH802162.1                           C 0 I 2
s Odobenus_rosmarus.KB229312.1                              506065 13 -   2017862 ------------------------------------------------CAA-C---T-TT--C-T--A--------------TAA
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                    3709  4 -     28053 AG----GA-----------------------------------------------------------------------------
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 9
s Onychomys_torridus.OnyTor_scaffold_2986                    79624 21 +    102263 AG----GGA----------------TC----------------TC---TA--A---C-TT--T-T--T--------------TAA
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9255 22 -     18566 AG----CAA----------------TT----------------CC---CAA-C---T-TT--G-T--G--------------TAG
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67146488 19 + 174332312 CA----GAA----------------TT----------------TC---TAA-C---TATT--T-T--------------------
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 2
s Otocyon_megalotis.JAEUCK010005147.1                       461753 22 -    559221 AG----AAA----------------TT----------------CC---CAG-C---T-TT--G-C--A--------------TAG
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         3293 25 +      8798 GG----GAA----------------TT----------------TC---TAA-TT--T-TT--T-T--T------------CCCTT
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             695457 25 -   1103335 gg----gaa----------------tt----------------tc---taa-t--tt-tt--t-t--tccct------------t
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    43509 20 +     80009 AA----GAA----------------TT----------------TC---CAA-T---A-TT--T-T--T----------------T
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03001836.1                             29434 20 +     51860 AA----GAA----------------TT----------------TC---CAA-T---A-TT--T-T--T----------------T
i Pan_troglodytes.NBAG03001836.1                         I 51 I 44
s Panthera_onca.PanOnc_flattened_line_3271                  150588 22 +    230217 AG----ACA----------------TT----------------TC---TAA-C---T-TT--G-T--A--------------TAG
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                263794 22 +  18783137 AG----ACA----------------TT----------------TC---TAA-C---T-TT--G-T--A--------------TAG
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4720432 22 -   8748460 AG----ACA----------------TT----------------TC---TAA-C---T-TT--G-T--A--------------TAG
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183442601 20 + 183742232 AG----GAA----------------TT----------------Tc---cga-t---t-tt--t-t--t----------------t
i Papio_anubis.CM001495.2                                C 0 I 8
s Papio_cynocephalus.k141_4307930                             6299 20 +     20448 AG----GAA----------------TT----------------TC---CGA-T---T-TT--T-T--T----------------T
i Papio_cynocephalus.k141_4307930                        C 0 I 8
s Papio_hamadryas.Contig39                                20563107 20 +  20919399 AG----GAA----------------TT----------------TC---CGA-T---T-TT--T-T--T----------------T
i Papio_hamadryas.Contig39                               C 0 I 8
s Papio_kindae.k141_1936966                                   5043 20 +     41871 AG----GAA----------------TT----------------TC---CGA-T---T-TT--T-T--T----------------T
i Papio_kindae.k141_1936966                              C 0 I 8
s Papio_papio.k141_802527                                     8328 20 +     27711 AG----GAA----------------TT----------------TC---CGA-T---T-TT--T-T--T----------------T
i Papio_papio.k141_802527                                C 0 I 8
s Papio_ursinus.k141_3428135                                  8406 20 +      9205 AG----GAA----------------TT----------------TC---CGA-T---T-TT--T-T--T----------------T
i Papio_ursinus.k141_3428135                             C 0 I 11
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12055 22 -     78924 AG----GAA----------------TT----------------TC---CAA-C---T-TT--G-T--A--------------TAG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            9439 24 +     13100 GA----GAA----------------TT----------------TC---TAA-T---G-TT--T-T--T------------TCCTT
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             7841 24 +     25941 GA----GAA----------------TT----------------TC---TAA-T---T-TT--T-T--T------------TCCTT
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18194243 21 -  18517816 AG----GGA----------------TC----------------TC---TA--A---C-TT--T-T--T--------------TTA
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Piliocolobus_badius.k141_1234363                           43071 19 +     62158 AA----GAA----------------TT----------------TC---CAA-T---T--T--T-T--T----------------C
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        37802 19 +     89929 AA----GAA----------------TT----------------TC---CAA-T---T--T--T-T--T----------------C
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            39218 19 +     51399 AA----GAA----------------TT----------------TC---CAA-T---T--T--T-T--T----------------C
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14295456 19 -  14605196 AA----GAA----------------TT----------------TC---CAA-T---T--T--T-T--T----------------C
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1246 22 +     22620 AT----GAC----------------TT----------------TC---CAA-C---T-TT--G-T--A--------------TAG
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189130549 20 + 189387572 AG----GAA----------------TT----------------TC---CAA-T---A-TT--T-T--T----------------T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570157 20 +   9816681 AG----GAA----------------TT----------------TC---CAA-T---A-TT--T-T--T----------------T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               72740 19 -     81375 AG----GAA----------------TT----------------TC---CAA-T---T--T--T-T--T----------------T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              4560 19 +     19060 AG----GAA----------------TT----------------TC---CAA-T---T--T--T-T--T----------------T
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 12386 22 -     22811 AG----GAA----------------CT----------------GC---CAA-C---T-TT--G-T--A--------------TAG
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2596269 20 -   4620579 GC----GAA----------------TT----------------TC---TAA-C---T-TT--T-T--T----------------G
i Prolemur_simus.MPIZ01000396.1                          C 0 I 1
s Propithecus_coquerelli.NW_012148875.1                     990252 20 +   2598838 GG----gaa----------------tt----------------tc---taa-c---t-tt--t-t--t----------------t
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 1
s Propithecus_coronatus.k141_347390                          28562 20 +     38485 GG----AAA----------------TT----------------TC---TAA-C---T-TT--T-T--T----------------T
i Propithecus_coronatus.k141_347390                      C 0 I 1
s Propithecus_diadema.k141_58108                               605 20 -     13098 GG----GAA----------------TT----------------TC---TAA-C---T-TT--T-T--T----------------T
i Propithecus_diadema.k141_58108                         C 0 I 1
s Propithecus_edwardsi.k141_1176054                          26083 20 +     35766 GG----GAA----------------TT----------------TC---TAA-C---T-TT--T-T--T----------------T
i Propithecus_edwardsi.k141_1176054                      C 0 I 1
s Propithecus_perrieri.k141_1200571                           4270 20 -     24134 GG----GAA----------------TT----------------TC---TAA-C---T-TT--T-T--T----------------T
i Propithecus_perrieri.k141_1200571                      C 0 I 1
s Propithecus_tattersalli.k141_790011                        28095 20 -     67325 GG----GAA----------------TT----------------TC---GAA-C---T-TT--T-T--T----------------T
i Propithecus_tattersalli.k141_790011                    C 0 I 1
s Propithecus_verreauxi.k141_956661                           4318 20 -      6182 GG----GAA----------------TT----------------TC---TAA-C---T-TT--T-T--T----------------T
i Propithecus_verreauxi.k141_956661                      C 0 I 1
s Psammomys_obesus.NESX01036370.1                             9866 16 -     21651 AG----GAC----------------TC----------------AC---TA--A---C-TT--T----------------------
i Psammomys_obesus.NESX01036370.1                        C 0 I 4
s Pteronotus_parnellii.KE909381.1                            14102 22 -     21811 AT----GAA----------------TT----------------TC---CAA-C---T-TT--G-T--A--------------CAG
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39638 22 +     42204 AG----AAA----------------TT----------------TC---CAA-C---T-TT--G-T--A--------------TGG
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22976185 22 +  28871421 GG----GAA----------------TT----------------TC---CAA-C---T-TT--G-T--A--------------TAG
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1359271 22 +   4952924 GG----GAA----------------TT----------------TC---CAA-C---T-TT--G-T--A--------------TAG
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20273742 22 -  38429054 AG----ACA----------------TT----------------TC---TAA-C---T-CT--G-T--A--------------TAG
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             14567 21 -     91421 AG----GAA----------------TT----------------TC---CAA-TT--T--TT-T-T--T----------------T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7608690 21 +   7812017 AG----GAA----------------TT----------------TC---CAA-TT--T--TT-T-T--T----------------T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             14538 22 -     72585 AG----GAA----------------TT----------------TC---CAA-TT--T--TTTT-T--T----------------T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53570108 16 +  90668790 TG----GAA----------------TC----------------TC---TA--A---C-CT--T----------------------
i Rattus_norvegicus.chr16                                C 0 I 4
s Rhinopithecus_bieti.k119_217274                             6254 21 -     11128 AG----GAA----------------TT----------------TC---CAA-TT--T--TT-T-T--T----------------T
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91235610 20 - 195417433 Ag----gaa----------------tt----------------tc---caa-t--tt--t--t-t--t----------------t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7671259 21 +   7961872 AG----GAA----------------TT----------------TC---CAA-TT--T--TT-T-T--T----------------T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87206 22 -     96226 GG----GAA----------------TT----------------TC---CAA-C---T-TT--G-T--A--------------TAG
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               7630 19 -      8359 AG----GAA----------------TT----------------TC---CGA-C---A-T---T-T--T----------------T
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_imperator.k141_2524406                             1590 19 +      2197 AG----GAA----------------TT----------------TC---TGA-C---A-T---T-T--T----------------T
i Saguinus_imperator.k141_2524406                        C 0 C 0
s Saguinus_inustus.k141_699149                               13004 19 +     13640 AG----GAA----------------TT----------------TC---CGA-C---A-T---T-T--T----------------T
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               7873 19 +      8564 AG----GAA----------------TT----------------TC---CGA-C---A-T---T-T--T----------------T
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209468722 19 + 209938924 AG----GAA----------------TT----------------TC---CTA-C---A-T---T-T--T----------------T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 7431 19 -      9399 AG----GAA----------------TT----------------TC---CGA-C---A-T---T-T--T----------------T
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119950352 19 - 121099817 AG----GAA----------------TT----------------TC---CAA-C---A-T---T-T--T----------------T
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       22808 19 +     46362 AG----GAA----------------TT----------------TC---CAA-C---A-T---T-T--T----------------T
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               22903 19 +     45824 AG----GAA----------------TT----------------TC---CAA-C---A-T---T-T--T----------------T
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             39531 19 -     64574 AG----GAA----------------TT----------------TC---CAA-C---A-T---T-T--T----------------T
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               2537 19 -     23631 AG----GAA----------------TT----------------TC---CAA-C---A-T---T-T--T----------------T
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 22799 19 -     61129 AG----GAA----------------TT----------------TC---CAA-C---A-T---T-T--T----------------T
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420127 19 -   5703754 AG----GAA----------------TT----------------TC---CAA-C---A-T---T-T--T----------------T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          55168 19 -     80660 AG----GAA----------------TT----------------TC---CAA-C---A-T---T-T--T----------------T
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    152571 22 -    313613 AC----AGA----------------TT----------------TC---CAA-T---T-TT--G-T--A--------------TAG
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          19079 20 -     19888 AG----GAA----------------TT----------------TC---CAA-T---T--TT-T-T--T----------------T
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26282 20 +     39453 AG----GAA----------------TT----------------TC---CAA-T---T--TT-T-T--T----------------T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            6801 20 +     27826 AG----GAA----------------TT----------------TC---CAA-T---T--TT-T-T--T----------------T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             6322 20 -     19483 AG----GAA----------------TT----------------TC---CAA-T---T--TT-T-T--T----------------T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      6390 20 +      7198 AG----GAA----------------TT----------------TC---CAA-T---T--TT-T-T--T----------------T
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         14648 20 +     15514 AG----GAA----------------TT----------------TC---CAA-T---T--TT-T-T--T----------------T
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11387 22 -     12148 -G----GAA----------------TA----------------TC---TC--A---C-TT--T-TTTT--------------TTA
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               3205 22 +   1910179 AG----AAA----------------TT----------------CC---TAA-C---T-TT--G-T--A--------------TAA
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13650452 12 -  18376816 GG----ACA----------------TT----------------TC---AAA----------------------------------
i Sorex_araneus.JH798187.1                               C 0 I 9
s Spermophilus_dauricus.KZ294078.1                         1952641 27 -   3870691 AG----GAA----------------TT----------------TC---Ca-ac---t-ct--t-t--tt-----gtgtgt----g
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30139 22 +     97271 AG----AAA----------------TT----------------TC---CAA-C---T-TT--G-T--A--------------TAG
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              17723 22 -    196729 AG----AAA----------------TT----------------TC---CAA-A---T-TT--G-T--A--------------TAC
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6809899 16 +  69701581 AG----GAG----------------TT----------------TC---TGA-C---T-TT-------------------------
i Sus_scrofa.CM000828.4                                  C 0 I 4
s Symphalangus_syndactylus.tarseq_199                      1092864 20 -   1523678 AG----GAA----------------TT----------------TC---CAA-T---A-TT--T-T--T----------------T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                10010  2 +     41958 GT-----------------------------------------------------------------------------------
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 71532 22 +    116680 AG----GAA----------------TT----------------TC---CAA-C---T-TC--G-C--G--------------TAG
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118156 22 -    156842 AG----GAA----------------TT----------------TC---CAA-C---T-TA--G-T--G--------------TAG
i Tapirus_indicus.TapInd_scaffold_9301                   I 2 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    386609 22 +    539355 AG----GAA----------------TT----------------TC---CAA-C---T-TA--G-T--G--------------TAG
i Tapirus_terrestris.TapTer_scaffold_755                 I 2 C 0
s Tarsius_lariang.k141_2201908                               25861 22 +     70052 AG----GAA----------------TT----------------TCGATCA--T---T-TT--T-T--T----------------T
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                 693 23 -     16117 AG----GAA----------------TT----------------TCGATCAT-T---T-TT--T-T--T----------------T
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186427971 20 + 186847797 Ag----gaa----------------tt----------------tc---caa-t---t-tt--t-t--t----------------t
i Theropithecus_gelada.CM009954.1                        C 0 I 8
s Tolypeutes_matacus.TolMat_scaffold_228639                   5384 22 +      8208 AT----GAA----------------TT----------------TC---AGA-C---T-TT--G-C--A--------------TAG
i Tolypeutes_matacus.TolMat_scaffold_228639              I 1614 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     80340 22 +    610378 AC----TGG----------------TT----------------TC---CAA-C---T-TG--G-T--A--------------CGG
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         10373 20 -     20410 AG----GAA----------------TT----------------TC---CAA-T---T--T-GT-T--T----------------T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    14567 20 +     15221 AG----GAA----------------TT----------------TC---CAA-T---T--TT-T-T--T----------------T
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                       10474 20 +     19930 AG----GAA----------------TT----------------TC---CAA-T---T--T-GT-T--T----------------T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       6901 20 -     19997 AG----GAA----------------TT----------------TC---CAA-T---T--TT-T-T--T----------------T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            47025 20 -     60166 AG----GAA----------------TT----------------TC---CAA-T---T--TT-T-T--T----------------T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        14496 20 -     27529 AG----GAA----------------TT----------------TC---CAA-T---T--T-GT-T--T----------------T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     14440 20 -     18194 AG----GAA----------------TT----------------TC---CAA-T---T--TT-T-T--T----------------T
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           8168 20 -     21137 AG----GAA----------------TT----------------TC---CAA-T---T--TT-T-T--T----------------T
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    6871 20 -     10723 AG----GAA----------------TT----------------TC---CAA-T---T--TT-T-T--T----------------T
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         6027 20 +      9834 AG----GAA----------------TT----------------TC---CAA-T---T--TT-T-T--T----------------T
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        24340 20 +     32220 AG----GAA----------------TT----------------TC---CAA-T---T--TT-T-T--T----------------T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5938442 20 +   6242583 AG----GAA----------------TT----------------TC---CAA-T---T--TT-T-T--T----------------T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        7694 20 +     20839 AG----GAA----------------TT----------------TC---CAA-T---T--TT-T-T--T----------------T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2155091 21 +   4065304 AG----GAA----------------TT----------------TC---CAA-C---T-GT--T-G--T---------------GA
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     8739 21 -     10553 AG----GAA----------------TT----------------TC---CAA-C---T-GT--T-G--T---------------GA
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   52732 22 -     77625 AG----ATA----------------TT----------------TC---CAA-T---T-CT--G-T--A--------------GAG
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4849843 22 -   5085361 AG----AAA----------------TT----------------TC---CAA-C---T-TT--G-T--A--------------TAG
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  10928 20 +     50397 GG----GAA----------------TT----------------TC---TAA-C---T-TT--T-T--T----------------G
i Varecia_rubra.k141_590885                              C 0 I 1
s Varecia_variegata.k141_1128296                             10987 20 +     24756 GG----GAA----------------TT----------------TC---TAA-C---T-TT--T-T--T----------------G
i Varecia_variegata.k141_1128296                         C 0 I 1
s Vicugna_pacos.KN270157.1                                 5371271 35 -   5488506 -------AA----------------TTTCCAACAGCAGGAATTTC---CAG-C---T-TT--T-T--A--------------CAG
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10198 22 -     43706 AG----AAA----------------TT----------------CC---CAG-C---T-TT--G-T--A--------------TAG
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        23845 22 -     24430 AG----GAA----------------TT----------------TC---CA-AC---T-CT--T-T--T--------------TTG
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          4573 13 +     86975 ------------------------------------------------CAA-C---T-TT--C-T--A--------------TAG
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      14422 20 +     63895 A-----GAA----------------TC----------------TC---TG--A---T-CT--T-T--T--------------GTG
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50341  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352  0 +    737560 C
e Loxodonta_africana.GL010049.1                            4216537 220 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            62473  5 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Colobus_guereza.LG01                                   199948958  0 + 200372422 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    136758  0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6181 2 +     62944 T------G
s Acinonyx_jubatus.LLWD01001279.1                           826757 2 -   1699592 T------A
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_11939                     24813 2 -     89785 T------A
i Acomys_cahirinus.AcoCah_scaffold_11939                 I 20 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510005 2 -  29979442 T------G
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             78776 2 -    347723 T------G
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     74136 2 -     89534 A------G
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14110 2 -     52922 T------G
i Allenopithecus_nigroviridis.k141_3361533               I 11 C 0
s Allochrocebus_lhoesti.k141_4309873                         14046 2 -     28001 T------G
i Allochrocebus_lhoesti.k141_4309873                     I 8 C 0
s Allochrocebus_preussi.k141_1442296                          4542 2 -     18505 T------G
i Allochrocebus_preussi.k141_1442296                     I 8 C 0
s Allochrocebus_solatus.k141_166128                           5395 2 -     12518 T------G
i Allochrocebus_solatus.k141_166128                      I 8 C 0
s Alouatta_belzebul.k141_3238538                              2841 2 -     27731 T------G
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                2972 2 +      3134 T------G
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               3100 2 -     45847 T------G
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                24310 2 +     25266 T------G
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_918386                              35 2 -      9457 T------G
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_3472759                            17606 2 -     18578 T------G
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              3005 2 +     47717 T------G
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             3105 2 -      3544 T------G
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             14329 2 +     50774 T------G
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184506 2 +    412891 T------G
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  14950 2 -     33861 T------G
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            14970 2 -     34016 T------G
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297367 2 -   5030052 T------G
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             14972 2 -     34685 T------G
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28096 2 -     47192 T------G
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      11345 2 +     20879 T------G
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       10833 2 +     14667 T------G
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3913 2 +     43469 C------A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  53227 2 -     92717 T------G
i Avahi_laniger.k141_765380                              I 1 C 0
s Avahi_peyrierasi.k141_1424874                              53854 2 +     85213 T------G
i Avahi_peyrierasi.k141_1424874                          I 1 C 0
s Callibella_humilis.k141_1278103                             4704 2 -     10423 T------G
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             24178 2 +     31915 T------G
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            4670 2 +      5267 T------G
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23589884 2 - 189096842 T------G
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             11415 2 -     12001 T------G
i Callithrix_kuhlii.k119_1164682                         I 1 C 0
s Camelus_bactrianus.KN276810.1                           10001804 2 -  17673402 t------g
i Camelus_bactrianus.KN276810.1                          C 0 I 1
s Camelus_dromedarius.KN272107.1                           2334262 2 -   7040546 t------g
i Camelus_dromedarius.KN272107.1                         C 0 I 1
s Camelus_ferus.KB017975.1                                  402545 2 -   1652518 t------g
i Camelus_ferus.KB017975.1                               C 0 I 1
s CanFam4.chr16                                           17798605 2 -  60362399 T------G
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184662 2 -    185531 T------G
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034048 2 -   9314153 T------G
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17958313 2 -  59632846 T------G
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18499825 2 +  63665305 C------G
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007247396.1                           200867 2 +    308752 t------g
i Carlito_syrichta.NW_007247396.1                        I 6 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                4276 2 -     11696 C------G
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     92435 2 +    217609 T------G
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          9329 2 -     11392 T------G
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               5427 2 -      7577 T------G
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25651479 2 +  26074798 T------G
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_398305                                 1055 2 +      1777 T------G
i Cebus_olivaceus.k141_398305                            C 0 C 0
s Cebus_unicolor.k141_544048                                 49388 2 -     74725 T------G
i Cebus_unicolor.k141_544048                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         4874 2 +     31688 T------G
i Cephalopachus_bancanus.k141_1423433                    I 8 C 0
s Ceratotherium_simum.JH767749.1                          12230851 2 +  27778364 T------G
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1878 2 -     25243 T------G
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        13604 2 -     19203 T------G
i Cercocebus_chrysogaster.k141_393940                    I 8 C 0
s Cercocebus_lunulatus.k141_3846941                           8257 2 +      8260 C------A
i Cercocebus_lunulatus.k141_3846941                      I 235 N 0
s Cercocebus_torquatus.k141_3057011                           8256 2 +     27781 T------G
i Cercocebus_torquatus.k141_3057011                      I 8 C 0
s Cercopithecus_ascanius.k141_1024104                         8417 2 -     20310 T------G
i Cercopithecus_ascanius.k141_1024104                    I 8 C 0
s Cercopithecus_cephus.k141_1078548                          11396 2 +     29689 T------G
i Cercopithecus_cephus.k141_1078548                      I 8 C 0
s Cercopithecus_diana.k141_2427854                            5823 2 +      9989 T------G
i Cercopithecus_diana.k141_2427854                       I 13 C 0
s Cercopithecus_hamlyni.k141_187466                          14075 2 -     27936 T------G
i Cercopithecus_hamlyni.k141_187466                      I 8 C 0
s Cercopithecus_lowei.k141_1854285                            2941 2 -     17152 T------G
i Cercopithecus_lowei.k141_1854285                       I 8 C 0
s Cercopithecus_albogularis.ctg5                                38816476 2 +  39242232 T------G
i Cercopithecus_albogularis.ctg5                               I 8 C 0
s Cercopithecus_mona.ctg39                                21222170 2 -  21565898 T------G
i Cercopithecus_mona.ctg39                               I 8 C 0
s Cercopithecus_neglectus.k141_2526306                       39288 2 -     53127 T------G
i Cercopithecus_neglectus.k141_2526306                   I 8 C 0
s Cercopithecus_nictitans.k141_3278028                        6556 2 +      7159 T------G
i Cercopithecus_nictitans.k141_3278028                   I 8 C 0
s Cercopithecus_petaurista.k141_807961                       14091 2 -     27947 T------G
i Cercopithecus_petaurista.k141_807961                   I 8 C 0
s Cercopithecus_pogonias.k141_822820                         14064 2 +     17596 T------G
i Cercopithecus_pogonias.k141_822820                     I 8 C 0
s Cercopithecus_roloway.k141_2567858                          3296 2 +     26000 T------G
i Cercopithecus_roloway.k141_2567858                     I 13 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_713168            1874 2 -      2554 T------A
i Chaetophractus_vellerosus.ChaVel_scaffold_713168       C 0 C 0
s Cheirogaleus_major.k141_333249                             20605 2 -     52598 T------A
i Cheirogaleus_major.k141_333249                         I 1 C 0
s Cheirogaleus_medius.k141_1055463                           15970 2 +     57038 T------G
i Cheirogaleus_medius.k141_1055463                       I 1 C 0
s Chiropotes_albinasus.k141_2813271                          10587 2 +     11226 T------G
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18428046 2 -  18827391 T------G
i Chlorocebus_aethiops.ctg25                             I 8 C 0
s Chlorocebus_pygerythrus.k141_1025673                       14483 2 -     50209 T------G
i Chlorocebus_pygerythrus.k141_1025673                   I 8 C 0
s Chlorocebus_sabaeus.CM001947.1                         135421483 2 + 135778131 t------g
i Chlorocebus_sabaeus.CM001947.1                         I 8 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 17295 2 +     19366 T------G
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            172392 2 +    839153 T------G
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1909992 2 +   2368649 T------G
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_polykomos.k141_906115                              36530 2 +     84244 T------G
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17547526 2 -  53390261 T------G
i Condylura_cristata.JH655891.1                          C 0 I 1
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          13740 2 -     20389 C------A
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetulus_griseus.LT883664.1                           11667053 2 + 224834208 T------G
i Cricetulus_griseus.LT883664.1                          I 4 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               2431 2 -     19598 T------G
i Crocidura_indochinensis.CroInd_scaffold_37019          I 9 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27911 2 -     87169 T------A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    836622 2 +   1526836 T------G
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            62478 1 +   2246927 -------a
i Dasypus_novemcinctus.JH564415.1                        I 5 C 0
s Daubentonia_madagascariensis.ctg71                      12536829 2 -  12879189 T------G
i Daubentonia_madagascariensis.ctg71                     I 1 C 0
s Desmodus_rotundus.KZ672289.1                             8629290 2 +  20541912 T------G
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672702 2 +   1390856 T------G
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    5454 2 +    198055 T------G
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Echinops_telfairi.JH980293.1                            48779850 2 + 111700974 T------A
i Echinops_telfairi.JH980293.1                           C 0 I 2
s Eidolon_helvum.KE759718.1                                   9950 2 +     11740 T------G
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1097147 2 +  10337057 A------G
i Elephantulus_edwardii.JH947257.1                       C 0 I 2
s Ellobius_lutescens.LOEQ01008920.1                          90543 2 +    110024 G------G
i Ellobius_lutescens.LOEQ01008920.1                      I 9 T 39365
s Ellobius_talpinus.LOJH01109367.1                             724 2 +      6299 G------G
i Ellobius_talpinus.LOJH01109367.1                       I 9 n 9
s Enhydra_lutris.KZ291758.1                               16328743 2 -  41312741 T------G
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144874 2 -  14770903 T------G
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1282766 2 +   4378816 T------G
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18530587 2 -  39960074 T------G
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               32602 2 +    498745 T------G
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21204654 2 -  21539334 T------G
i Erythrocebus_patas.Contig38                            I 9 C 0
s Eulemur_albifrons.k141_342033                              13330 2 -     14127 T------G
i Eulemur_albifrons.k141_342033                          I 1 C 0
s Eulemur_collaris.k141_377015                                6030 2 -     16928 T------G
i Eulemur_collaris.k141_377015                           I 1 C 0
s Eulemur_coronatus.k141_885031                              15057 2 -     25546 T------G
i Eulemur_coronatus.k141_885031                          I 1 C 0
s Eulemur_flavifrons.k141_1184614                            12266 2 +     26330 T------G
i Eulemur_flavifrons.k141_1184614                        I 1 C 0
s Eulemur_fulvus.k141_544389                                 13494 2 +     23973 T------G
i Eulemur_fulvus.k141_544389                             I 1 C 0
s Eulemur_macaco.k141_1562045                                12263 2 +     75513 T------G
i Eulemur_macaco.k141_1562045                            I 1 C 0
s Eulemur_mongoz.k141_232305                                 10189 2 +     97555 T------G
i Eulemur_mongoz.k141_232305                             I 1 C 0
s Eulemur_rubriventer.k141_571033                            13120 2 +     26496 T------G
i Eulemur_rubriventer.k141_571033                        I 1 C 0
s Eulemur_rufus.k141_1476633                                  3730 2 -     17153 T------G
i Eulemur_rufus.k141_1476633                             I 1 C 0
s Eulemur_sanfordi.k141_1122526                              13305 2 +    111500 T------G
i Eulemur_sanfordi.k141_1122526                          I 1 C 0
s Felis_catus.CM001381.2                                  20236408 2 + 206538554 T------A
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195251 2 + 205367284 T------A
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  8765 2 -     36744 T------A
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     425786 2 -    453645 T------G
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             3493 2 +     11339 T------G
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                             796 2 +     41679 T------G
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840                665 2 -      9135 T------G
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              15436 2 -     32273 T------G
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186337582 2 + 186649187 T------G
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6377 2 -     19426 T------G
i Hapalemur_alaotrensis.k141_170648                      I 1 C 0
s Hapalemur_gilberti.k141_488810                             11526 2 -     15286 T------G
i Hapalemur_gilberti.k141_488810                         I 1 C 0
s Hapalemur_griseus.k141_1511508                             13165 2 +     18253 T------G
i Hapalemur_griseus.k141_1511508                         I 1 C 0
s Hapalemur_meridionalis.k141_248335                         13266 2 -     41752 T------G
i Hapalemur_meridionalis.k141_248335                     I 1 C 0
s Hapalemur_occidentalis.k141_907772                         13103 2 -     16460 T------G
i Hapalemur_occidentalis.k141_907772                     I 1 C 0
s Helogale_parvula.HelPar_flattened_line_2585               241746 2 +    327341 T------A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_596025                 208 2 +       452 T------A
i Heterohyrax_brucei.HetBruBak_scaffold_596025           C 0 N 0
s Hoolock_leuconedys.ctg274                                    434249 2 +    630532 T------G
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  43906 2 +     55795 T------A
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_232023                                2015 2 -     12752 T------G
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                               2059 2 +     14092 T------G
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189542842 2 - 191637585 T------G
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3335737 2 -  11177569 T------G
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7519483 8 -   7955117 tgtgtgtg
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   22048 2 +     31101 T------G
i Indri_indri.k141_3655594                               I 1 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    13282 2 -     42476 T------G
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15523612 2 -  30322482 T------G
i Lemur_catta.scaffold_24                                I 1 C 0
s Leontocebus_fuscicollis.k141_1820339                        6969 2 +     64341 T------G
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           4293 2 +      4941 T------G
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        7011 2 +     35603 T------G
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    28479 2 +     38576 T------G
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         25176 2 +     66356 T------G
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         10504 2 -     23766 T------G
i Lepilemur_ankaranensis.k141_596936                     I 1 C 0
s Lepilemur_dorsalis.k141_577674                             28566 2 +     45836 T------G
i Lepilemur_dorsalis.k141_577674                         I 1 C 0
s Lepilemur_ruficaudatus.k141_121139                          1105 2 +     25010 T------G
i Lepilemur_ruficaudatus.k141_121139                     I 1 C 0
s Lepilemur_septentrionalis.k141_185316                      26502 2 +     54090 T------G
i Lepilemur_septentrionalis.k141_185316                  I 1 C 0
s Leptonychotes_weddellii.KB714746.1                       3042271 2 +   3914936 T------G
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     5680 2 -     14121 T------G
i Lepus_americanus.LepAme_scaffold_107385                I 2 C 0
s Lophocebus_aterrimus.ctg367                              1436606 2 +   1826925 T------G
i Lophocebus_aterrimus.ctg367                            I 8 C 0
s Loris_lydekkerianus.k141_2539221                            5167 2 +     11245 T------G
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004017 2 +   6120653 T------G
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17954553 2 -  59628241 T------G
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               6416 2 +     40492 T------G
i Macaca_arctoides.k141_2326796                          I 8 C 0
s Macaca_assamensis.Contig5                               59675675 2 +  60120075 T------G
i Macaca_assamensis.Contig5                              I 8 C 0
s Macaca_cyclopis.k119_18836                                 12188 2 -     26193 T------G
i Macaca_cyclopis.k119_18836                             I 10 C 0
s Macaca_fascicularis.k141_814140                            79972 2 -    114318 T------G
i Macaca_fascicularis.k141_814140                        I 8 C 0
s Macaca_fuscata.k119_255327                                  5663 2 -     23192 T------G
i Macaca_fuscata.k119_255327                             I 10 C 0
s Macaca_leonina.k141_3550399                                15132 2 -     29190 T------G
i Macaca_leonina.k141_3550399                            I 8 C 0
s Macaca_maura.k141_2733130                                  23697 2 +     37952 T------G
i Macaca_maura.k141_2733130                              I 8 C 0
s Macaca_mulatta.NC_041758.1                             186838786 2 + 187317192 t------g
i Macaca_mulatta.NC_041758.1                             I 10 C 0
s Macaca_nemestrina.KQ007038.1                            25457349 2 -  25927173 t------g
i Macaca_nemestrina.KQ007038.1                           I 8 C 0
s Macaca_nigra.k141_1655396                                  79545 2 +     89720 T------G
i Macaca_nigra.k141_1655396                              I 5 C 0
s Macaca_radiata.k141_3680011                                 6546 2 +     20474 T------G
i Macaca_radiata.k141_3680011                            I 8 C 0
s Macaca_siberu.k141_635500                                   6346 2 -     14993 T------G
i Macaca_siberu.k141_635500                              I 8 C 0
s Macaca_silenus.Contig273                                  329212 2 -    668171 T------G
i Macaca_silenus.Contig273                               I 8 C 0
s Macaca_thibetana.k99_256239                                 4662 2 -     24072 T------G
i Macaca_thibetana.k99_256239                            I 8 C 0
s Macaca_tonkeana.k141_1498238                               25284 2 -     45290 T------G
i Macaca_tonkeana.k141_1498238                           I 10 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90047 2 +     94391 T------G
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23936880 2 -  24302211 T------G
i Mandrillus_leucophaeus.scaffold280                     I 8 C 0
s Mandrillus_sphinx.Contig270                               351009 2 +    752769 T------G
i Mandrillus_sphinx.Contig270                            I 8 C 0
s Marmota_marmota.CZRN01000018.1                          33101795 8 -  40650429 tgtgtttg
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         9755 2 -    207569 T------A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              9460 2 +     13704 T------G
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 32250 2 +    140813 T------A
i Meriones_unguiculatus.MerUng_scaffold_7390             I 5 C 0
s Mesocricetus_auratus.KB708134.1                         12181737 2 -  29670104 T------G
i Mesocricetus_auratus.KB708134.1                        I 5 C 0
s Mico_argentatus.k141_1239457                                5244 2 -      7380 T------G
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               4317 2 +     18990 T------G
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      5256 2 -      7356 T------G
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18291027 2 -  93316391 T------G
i Microcebus_murinus.CM007674.1                          I 1 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    21578 2 -    145209 T------A
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 2
s Micronycteris_hirsuta.MicHir_scaffold_52381                14831 2 -     19307 T------G
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850067 2 +   8254450 G------G
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             33744 2 +     64694 G------G
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           8601 2 -     28506 T------G
i Miopithecus_ogouensis.k141_534055                      I 8 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         5139 2 -      8324 T------G
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      8571 2 -     37649 T------G
i Mirza_zaza.k141_952172                                 I 1 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140775 2 -    366855 C------A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   34859 2 +     37127 T------A
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5938 2 +     14753 T------G
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84360854 2 - 120012414 T------G
i Mus_caroli.LT608237.1                                  I 4 C 0
s Mus_musculus.chr8                                       87649855 2 - 129401213 T------G
i Mus_musculus.chr8                                      I 4 C 0
s Mus_pahari.LT608297.1                                   31354510 2 -  89631738 T------G
i Mus_pahari.LT608297.1                                  I 4 C 0
s Mus_spretus.CM004101.1                                  90751915 2 - 130317789 T------G
i Mus_spretus.CM004101.1                                 I 4 C 0
s Mustela_putorius.JH418006.1                               300644 2 -  14710649 T------G
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                279111 2 -  10118263 T------G
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1586804 2 -   6019432 T------G
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902876 2 -   4330536 T------G
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              188194 2 +    196477 C------G
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2033357 2 -   3037898 t------g
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               14588 2 +     21681 T------G
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306393 2 +  31847680 T------G
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9148807 2 -   9404916 T------G
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102578996 2 - 196305487 C------G
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_771082                               841 2 -      2667 C------G
i Nycticebus_coucang.k141_771082                         C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749417 2 + 199412804 T------G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1362830 2 +   3988456 T------A
i Ochotona_princeps.JH802162.1                           I 2 C 0
s Odobenus_rosmarus.KB229312.1                              506078 2 -   2017862 T------G
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                    3722 2 -     28053 G------G
i Ondatra_zibethicus.OndZib_scaffold_46174               I 9 n 9
s Onychomys_torridus.OnyTor_scaffold_2986                    79645 2 +    102263 T------G
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9277 2 -     18566 T------G
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 I 2
s Oryctolagus_cuniculus.CM000791.1                        67146509 2 + 174332312 T------G
i Oryctolagus_cuniculus.CM000791.1                       I 2 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       461775 2 -    559221 T------G
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         3318 2 +      8798 T------G
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             695482 2 -   1103335 t------t
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    43529 2 +     80009 T------G
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189142438 2 + 189151597 T------G
i Pan_troglodytes.CM009242.2                             I 20 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  150610 2 +    230217 T------A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                263816 2 +  18783137 T------A
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4720454 2 -   8748460 T------A
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183442629 2 + 183742232 t------g
i Papio_anubis.CM001495.2                                I 8 C 0
s Papio_cynocephalus.k141_4307930                             6327 2 +     20448 T------G
i Papio_cynocephalus.k141_4307930                        I 8 C 0
s Papio_hamadryas.Contig39                                20563135 2 +  20919399 T------G
i Papio_hamadryas.Contig39                               I 8 C 0
s Papio_kindae.k141_1936966                                   5071 2 +     41871 T------G
i Papio_kindae.k141_1936966                              I 8 C 0
s Papio_papio.k141_802527                                     8356 2 +     27711 T------G
i Papio_papio.k141_802527                                I 8 C 0
s Papio_ursinus.k141_3428135                                  8437 2 +      9205 T------G
i Papio_ursinus.k141_3428135                             I 11 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12077 2 -     78924 A------A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            9463 2 +     13100 T------G
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             7865 2 +     25941 T------G
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18194264 2 -  18517816 T------G
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Piliocolobus_badius.k141_1234363                           43090 2 +     62158 T------G
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        37821 2 +     89929 T------G
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            39237 2 +     51399 T------G
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14295475 2 -  14605196 T------G
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1268 2 +     22620 T------G
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189130569 2 + 189387572 T------G
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570177 2 +   9816681 T------G
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               72759 2 -     81375 T------C
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              4579 2 +     19060 T------C
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 12408 2 -     22811 T------A
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 I 363
s Prolemur_simus.MPIZ01000396.1                            2596290 2 -   4620579 T------G
i Prolemur_simus.MPIZ01000396.1                          I 1 C 0
s Propithecus_coquerelli.NW_012148875.1                     990273 2 +   2598838 T------G
i Propithecus_coquerelli.NW_012148875.1                  I 1 C 0
s Propithecus_coronatus.k141_347390                          28583 2 +     38485 T------G
i Propithecus_coronatus.k141_347390                      I 1 C 0
s Propithecus_diadema.k141_58108                               626 2 -     13098 T------G
i Propithecus_diadema.k141_58108                         I 1 C 0
s Propithecus_edwardsi.k141_1176054                          26104 2 +     35766 T------G
i Propithecus_edwardsi.k141_1176054                      I 1 C 0
s Propithecus_perrieri.k141_1200571                           4291 2 -     24134 T------G
i Propithecus_perrieri.k141_1200571                      I 1 C 0
s Propithecus_tattersalli.k141_790011                        28116 2 -     67325 T------G
i Propithecus_tattersalli.k141_790011                    I 1 C 0
s Propithecus_verreauxi.k141_956661                           4339 2 -      6182 T------G
i Propithecus_verreauxi.k141_956661                      I 1 C 0
s Psammomys_obesus.NESX01036370.1                             9886 2 -     21651 T------A
i Psammomys_obesus.NESX01036370.1                        I 4 C 0
s Pteronotus_parnellii.KE909381.1                            14124 2 -     21811 C------G
i Pteronotus_parnellii.KE909381.1                        C 0 I 7
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39660 2 +     42204 T------G
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22976207 2 +  28871421 T------G
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1359293 2 +   4952924 T------G
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20273764 2 -  38429054 T------A
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             14588 2 -     91421 G------G
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7608711 2 +   7812017 T------G
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             14560 2 -     72585 T------G
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53570128 2 +  90668790 T------G
i Rattus_norvegicus.chr16                                I 4 C 0
s Rhinopithecus_bieti.k119_217274                             6275 2 -     11128 T------G
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91235630 2 - 195417433 t------g
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7671280 2 +   7961872 T------G
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87228 2 -     96226 T------G
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               7649 2 -      8359 T------G
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_imperator.k141_2524406                             1609 2 +      2197 T------G
i Saguinus_imperator.k141_2524406                        C 0 C 0
s Saguinus_inustus.k141_699149                               13023 2 +     13640 T------G
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               7892 2 +      8564 T------G
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209468741 2 + 209938924 T------G
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 7450 2 -      9399 T------G
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119950371 2 - 121099817 T------G
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       22827 2 +     46362 T------G
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               22922 2 +     45824 T------G
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             39550 2 -     64574 T------G
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               2556 2 -     23631 T------G
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 22818 2 -     61129 T------G
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420146 2 -   5703754 T------G
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          55187 2 -     80660 T------G
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    152593 2 -    313613 T------G
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          19099 2 -     19888 T------G
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26302 2 +     39453 T------G
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            6821 2 +     27826 T------G
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             6342 2 -     19483 T------G
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      6410 2 +      7198 T------G
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         14668 2 +     15514 T------G
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11409 2 -     12148 T------G
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               3227 2 +   1910179 T------A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13650473 2 -  18376816 T------C
i Sorex_araneus.JH798187.1                               I 9 C 0
s Spermophilus_dauricus.KZ294078.1                         1952668 8 -   3870691 tgtgtgtg
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30161 2 +     97271 T------G
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              17745 2 -    196729 T------A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6809919 2 +  69701581 T------G
i Sus_scrofa.CM000828.4                                  I 4 C 0
s Symphalangus_syndactylus.tarseq_199                      1092884 2 -   1523678 T------G
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 71554 2 +    116680 C------G
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118178 2 -    156842 T------G
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    386631 2 +    539355 T------G
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               25883 2 +     70052 T------G
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                 716 2 -     16117 T------G
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186427999 2 + 186847797 t------g
i Theropithecus_gelada.CM009954.1                        I 8 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   5406 2 +      8208 T------A
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     80362 2 +    610378 T------G
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         10393 2 -     20410 T------G
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    14587 2 +     15221 T------G
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                       10494 2 +     19930 T------G
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       6921 2 -     19997 T------G
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            47045 2 -     60166 T------G
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        14516 2 -     27529 T------G
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     14460 2 -     18194 T------G
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           8188 2 -     21137 T------G
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    6891 2 -     10723 T------G
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         6047 2 +      9834 T------G
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        24360 2 +     32220 T------G
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5938462 2 +   6242583 T------G
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        7714 2 +     20839 T------G
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2155112 2 +   4065304 T------G
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     8760 2 -     10553 T------G
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   52754 2 -     77625 T------G
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4849865 2 -   5085361 T------G
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  10949 2 +     50397 T------G
i Varecia_rubra.k141_590885                              I 1 C 0
s Varecia_variegata.k141_1128296                             11008 2 +     24756 T------G
i Varecia_variegata.k141_1128296                         I 1 C 0
s Vicugna_pacos.KN270157.1                                 5371306 2 -   5488506 t------g
i Vicugna_pacos.KN270157.1                               C 0 I 1
s Vulpes_lagopus.VulLag_flattened_line_30954                 10220 2 -     43706 T------G
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        23867 2 -     24430 T------G
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          4586 2 +     86975 T------G
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      14442 2 +     63895 T------G
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292156 531 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937 0 +    114563 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                10012 0 +     41958 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813 0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50341 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352 0 +    737560 C
e Loxodonta_africana.GL010049.1                            4216537 220 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547 0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084 0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 49575 0 +     63868 C
e Colobus_guereza.LG01                                   199948958 0 + 200372422 C
e Chinchilla_lanigera.JH722012.1                           1251498 0 +   2543920 C
e Cercocebus_atys.KQ010504.1                               4475051 11 +   4669795 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99291 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157 0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    136758 0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6183 26 +     62944 TTA-ACC--AGA---AA--TTTGAAA------TT-------------AA------AAT-A
s Acinonyx_jubatus.LLWD01001279.1                           826759 26 -   1699592 TCA-ACC--TGA---AA--cgtgaaa------tt-------------aa------aat-a
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_11939                     24815 23 -     89785 TTA-ATA--T-----GAAATTTGAAG------TT-------------AA------A----
i Acomys_cahirinus.AcoCah_scaffold_11939                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510007 26 -  29979442 TTA-acc--tga---aa--tttgaaa------tt-------------aa------aat-a
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             78778 26 -    347723 TTA-ACC--tga---aa--cttgaaa------tt-------------aa------aat-a
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     74138 22 -     89534 TTG-AC---T-----ACAACTTGAGC------TT-------------AG------A----
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14112 26 -     52922 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         14048 26 -     28001 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          4544 26 -     18505 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           5397 26 -     12518 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                              2843 14 -     27731 TTA-ACC--TGA---AA--TTC--------------------------------------
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                2974 14 +      3134 TTA-ACC--TGA---AA--TTC--------------------------------------
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               3102 14 -     45847 TTA-ACC--TGA---AA--TTC--------------------------------------
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                24312 14 +     25266 TTA-ACC--TGA---AA--TTC--------------------------------------
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_918386                              37 14 -      9457 TTA-ACC--TGA---AA--TTC--------------------------------------
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_3472759                            17608 14 -     18578 TTA-ACC--TGA---AA--TTC--------------------------------------
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              3007 14 +     47717 TTA-ACC--TGA---AA--TTC--------------------------------------
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             3107 14 -      3544 TTA-ACC--TGA---AA--TTC--------------------------------------
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             14331 14 +     50774 TTA-ACC--TGA---AA--TTC--------------------------------------
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184508 26 +    412891 ATA-ACC--TGA---AA--GTTACAA------TT-------------AA------AAT-A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  14952 14 -     33861 TCA-ACC--TGA---AA--TTC--------------------------------------
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            14972 14 -     34016 TCA-ACC--TGA---AA--TTC--------------------------------------
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297369 14 -   5030052 TCA-ACC--Tga---aa--ttc--------------------------------------
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             14974 14 -     34685 TCA-ACC--TGA---AA--TTC--------------------------------------
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28098 14 -     47192 TCA-ACC--TGA---AA--TTC--------------------------------------
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      11347 22 +     20879 TTA-CCT-GA-----AA--TTTGAGG------TT-------------AA------A----
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       10835 25 +     14667 ATA-ACC--TTA---AA--TTTGAGC------TT-------------AA------AA--A
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3915 26 +     43469 ATA-ACC--TGA---AA--TTTGCAA------TT-------------AA------ACT-G
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  53229 24 -     92717 TTA-ACC--TGA---AA--TTGAAGT------T---------------A------AAA-A
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              53856 24 +     85213 TTA-ACC--TGA---AA--TTGAAGT------T---------------A------AAA-A
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             4706 14 -     10423 TTA-ACC--TGA---AA--TTC--------------------------------------
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             24180 14 +     31915 TTA-ACC--TGA---AA--TTC--------------------------------------
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            4672 14 +      5267 TTA-ACC--TGA---AA--TTC--------------------------------------
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23589886 14 - 189096842 TTA-ACC--TGA---AA--TTC--------------------------------------
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             11417 14 -     12001 TTA-ACC--TGA---AA--TTC--------------------------------------
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10001807 12 -  17673402 ----------------------caaa------tt-------------aa------aat-a
i Camelus_bactrianus.KN276810.1                          I 1 C 0
s Camelus_dromedarius.KN272107.1                           2334265 12 -   7040546 ----------------------caaa------tt-------------aa------aat-a
i Camelus_dromedarius.KN272107.1                         I 1 C 0
s Camelus_ferus.KB017975.1                                  402548 12 -   1652518 ----------------------caaa------tt-------------aa------aat-a
i Camelus_ferus.KB017975.1                               I 1 C 0
s CanFam4.chr16                                           17798607 26 -  60362399 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184664 26 -    185531 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034050 26 -   9314153 TTA-acc--tga---aa--tttgaaa------tt-------------aa------aat-a
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17958315 26 -  59632846 TTA-acc--tga---aa--tttgaaa------tt-------------aa------aat-a
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18499827 26 +  63665305 TTA-acc--tga---aa--tttgaaa------tt-------------aa------aat-a
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007247396.1                           200869 20 +    308752 tta-acc--tga---aa--ttcacat------tt--------------------------
i Carlito_syrichta.NW_007247396.1                        C 0 I 4
s Carollia_perspicillata.CarPer_scaffold_92756                4278 26 -     11696 ATA-ACC--TGG---AA--TTTGCAA------TT-------------AA------AAT-A
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     92437 26 +    217609 TTA-ACT--TGA---AA--TTTTAAA------TT-------------AA------AAT-A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          9331 14 -     11392 TTA-ACC--TGA---AA--TTC--------------------------------------
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               5429 14 -      7577 TTA-ACC--TGA---AA--TTC--------------------------------------
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25651481 14 +  26074798 TTA-ACC--TGA---AA--TTC--------------------------------------
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_398305                                 1057 14 +      1777 TTA-ACC--TGA---AA--TTC--------------------------------------
i Cebus_olivaceus.k141_398305                            C 0 C 0
s Cebus_unicolor.k141_544048                                 49390 14 -     74725 TTA-ACC--TGA---AA--TTC--------------------------------------
i Cebus_unicolor.k141_544048                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         4876 20 +     31688 TTA-ACC--TGA---AA--TTCACAT------TT--------------------------
i Cephalopachus_bancanus.k141_1423433                    C 0 I 4
s Ceratotherium_simum.JH767749.1                          12230853 26 +  27778364 TTA-ACC--TGA---AA--TATGAAA------TC-------------AA------AAT-A
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1880 26 -     25243 TTA-ACC--TGA---AA--TATGAAA------TC-------------AA------AAT-A
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4475062 25 +   4669795 -ta-acc--tga---aa--tttgaaa------tt-------------aa------aat-a
i Cercocebus_atys.KQ010504.1                             I 11 C 0
s Cercocebus_chrysogaster.k141_393940                        13606 26 -     19203 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3342297                            223 25 -     14043 -TA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Cercocebus_lunulatus.k141_3342297                      N 0 C 0
s Cercocebus_torquatus.k141_3057011                           8258 26 +     27781 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         8419 26 -     20310 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          11398 26 +     29689 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AC------AAT-A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_2427854                            5825 26 +      9989 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Cercopithecus_diana.k141_2427854                       C 0 N 0
s Cercopithecus_hamlyni.k141_187466                          14077 26 -     27936 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            2943 26 -     17152 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38816478 26 +  39242232 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222172 26 -  21565898 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       39290 26 -     53127 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        6558 26 +      7159 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14093 26 -     27947 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         14066 26 +     17596 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2567858                          3298 12 +     26000 TTA-ACC--TGA---AA--T----------------------------------------
i Cercopithecus_roloway.k141_2567858                     C 0 N 0
s Chaetophractus_vellerosus.ChaVel_scaffold_713168            1876 26 -      2554 TT-AACC--TGA---AA--TTTGAAA------TC-------------A------AAAT-A
i Chaetophractus_vellerosus.ChaVel_scaffold_713168       C 0 C 0
s Cheirogaleus_major.k141_333249                             20607 25 -     52598 TTA-ATC--TGA---AA--TTTGAAA------T-------------G-A------AAA-A
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           15972 25 +     57038 TTA-ACC--TGA---AA--TTTGAAA------T-------------G-A------AAA-A
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                          10589 14 +     11226 TTA-ACC--TGA---AA--TTC--------------------------------------
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18428048 26 -  18827391 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       14485 26 -     50209 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135421485 26 + 135778131 tta-acc--tga---aa--tttgaaa------tt-------------aa------aat-a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 17297 24 +     19366 TT--GCC--TGA---AA--TTTGAAA------TC-------------A-------AAT-A
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            172394 24 +    839153 TT--GCC--TGA---AA--TTTGAAA------TC-------------A-------aat-a
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1909994 26 +   2368649 TTA-acc--tga---aa--tttgaaa------tt-------------aa------aat-a
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_polykomos.k141_906115                              36532 26 +     84244 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17547529 24 -  53390261 TTC-ACC--TAA---Aa--tttgaca------tt-------------aa--------t-t
i Condylura_cristata.JH655891.1                          I 1 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          13742 25 -     20389 TTA-ACC--TGA---AA--TTTGAAA------TT-------------A-------AAT-A
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 49575 23 +     63868 TCC-TTC--T-----GAAATTTCAAG------TT-------------AA------A----
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11667055 23 + 224834208 TTG-ATC--T-----GAAATTTAATG------TT-------------AA------A----
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               2433 24 -     19598 TTT-AC---TAA---GA--T-TGTAA------CT-------------AA------GAT-A
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27913 26 -     87169 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    836624 23 +   1526836 TTA-ACCTGA-----GA--TATGATG------TA-------------AA------T----
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            62479 37 +   2246927 tg--gcc--tga---ga--tctgtaa------gctcctaccccaaata-------aa-ta
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12536831 26 -  12879189 TTA-ACC--TGA---AA--TTTGAAG------TT-------------AA------AAA-A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8629292 26 +  20541912 ATA-ACC--TCA---AA--TTTGAAA------TT-------------AA------agt-a
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672704 26 +   1390856 TTA-ACC--TGA---AA--TATGAAA------TC-------------AA------AAT-A
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    5456 26 +    198055 TTA-ACC--TGA---AA--TATGAAA------TC-------------AA------AAT-A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Echinops_telfairi.JH980293.1                            48779854 24 + 111700974 -----------A---Ac--atgaaatgtaaaatt-------------aa------aat-a
i Echinops_telfairi.JH980293.1                           I 2 C 0
s Eidolon_helvum.KE759718.1                                   9952 26 +     11740 TTA-GCC--tga---aa--cttgaaa------tt-------------aa------aat-a
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1097151 24 +  10337057 -----------A---ac--ctaaaat------tt-------------aaaattaaaat-a
i Elephantulus_edwardii.JH947257.1                       I 2 C 0
s Ellobius_lutescens.LOEQ01008920.1                          19822 12 -    110024 -------------------TTTGAAG------TT-------------Aa------a----
i Ellobius_lutescens.LOEQ01008920.1                      I 777 C 0
s Ellobius_talpinus.LOJH01109367.1                            5915 12 -      6299 -------------------TTTGAag------tt-------------aa------a----
i Ellobius_talpinus.LOJH01109367.1                       I 789 C 0
s Enhydra_lutris.KZ291758.1                               16328745 26 -  41312741 TTA-ACc--tga---aa--cttgaaa------tt-------------aa------aat-a
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144876 26 -  14770903 AGC-ACC--Tca---ga--tttgaaa------tg-------------aa------aat-a
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1282768 26 +   4378816 TCA-ACC--Tga---aa--taggaaa------tt-------------aa------aat-a
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18530589 26 -  39960074 TCA-ACC--Tga---aa--taggaaa------tt-------------aa------aat-a
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               32604 26 +    498745 TCA-ACC--tga---aa--taggaaa------tt-------------aa------aat-a
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21204656 26 -  21539334 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13332 25 -     14127 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAG--
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6032 25 -     16928 TTA-ACT--TGA---AA--TTTGAAA------TT-------------AA------AAG--
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15059 25 -     25546 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAG--
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12268 25 +     26330 TTA-ACT--TGA---AA--TTTGAAA------TT-------------AA------AAG--
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 13496 25 +     23973 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAG--
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12265 25 +     75513 TTA-ACT--TGA---AA--TTTGAAA------TT-------------AA------AAG--
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10191 25 +     97555 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAG--
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            13122 25 +     26496 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAG--
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  3732 25 -     17153 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAG--
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13307 25 +    111500 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAG--
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20236410 26 + 206538554 TCA-ACC--TGA---AA--cgtgaaa------tt-------------aa------aat-a
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195253 26 + 205367284 TCA-ACC--TGA---AA--cgtgaaa------tt-------------aa------aat-a
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  8767 26 -     36744 TCA-ACC--TGA---AA--CGTGAAA------TT-------------AA------AAT-A
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     425788 25 -    453645 GTA-ACC--TGA---AA--TTTGAGC------TT-------------AA------AA--A
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             3495 25 +     11339 GTA-ACC--TGA---AA--TTTGAGC------TT-------------AA------AA--A
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                             798 25 +     41679 GTA-ACC--TGA---AA--TTTGAGC------TT-------------AA------AA--A
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840                667 29 -      9135 TTA-ACC--TGCTGCAA--TTTGAAA------TT-------------AA------AAT-A
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              15438 26 -     32273 TTA-ACC--AGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186337584 26 + 186649187 TTA-Acc--aga---aa--tttgaaa------tt-------------aa------aat-a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6379 24 -     19426 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------A-A--
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             11528 24 -     15286 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------A-A--
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13167 24 +     18253 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------A-A--
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13268 24 -     41752 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------A-A--
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13105 24 -     16460 TTA-ACC--TGA---AA--TTTGAAA------TC-------------AA------A-A--
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               241748 26 +    327341 TTA-ATC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                 318 26 +      7595 TTA-ATC--TTC---AC--TTTAAAA------TA-------------AA------AGT-G
i Heterohyrax_brucei.HetBruBak_scaffold_122365           N 0 C 0
s Hoolock_leuconedys.ctg274                                    434251 26 +    630532 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  43908 26 +     55795 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_232023                                2017 26 -     12752 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                               2061 26 +     14092 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189542844 26 - 191637585 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3335739 26 -  11177569 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7519491 22 -   7955117 tta-cct-gA-----AA--TTTGAAG------Tt-------------aa------a----
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   22050 24 +     31101 TTA-ACC--CAA---AA--TTGAAAT------T---------------A------AAA-A
i Indri_indri.k141_3655594                               C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    13284 26 -     42476 GTC-ACC--TCA---GA--TTTGAAA------TG-------------AA------AAT-A
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15523614 24 -  30322482 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------A-A--
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        6971 14 +     64341 TTA-ACC--TGA---AA--TTC--------------------------------------
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           4295 14 +      4941 TTA-ACC--TGA---AA--TTC--------------------------------------
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        7013 14 +     35603 TTA-ACC--TGA---AA--TTC--------------------------------------
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    28481 14 +     38576 TTA-ACC--TGA---AA--TTC--------------------------------------
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         25178 14 +     66356 TTA-ACC--TGA---AA--TTC--------------------------------------
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         10506 25 -     23766 TTA-ACC--TGA---AA--TTTGAAA------T-------------G-A------AAA-A
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             28568 25 +     45836 TTA-ACC--TGA---AA--TTTGAAA------T-------------G-A------AAA-A
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1107 25 +     25010 TTA-ACC--TGA---AA--TTTGAAA------T-------------G-A------AAA-A
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      26504 25 +     54090 TTA-ACC--TGA---AA--TTTGAAA------T-------------G-A------AAA-A
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3042273 26 +   3914936 CTA-acc--tga---aa--tttgaaa------tt-------------aa------aat-g
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     5682 26 -     14121 TTC-ATC--TGA---AT--TTTTAAA------TT-------------AA------AAT-A
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1436608 26 +   1826925 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5169 25 +     11245 ATA-ACC--TGA---AA--TTTGAGC------TT-------------AA------AA--A
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004019 25 +   6120653 ATA-ACC--TGA---AA--TTTGAGC------TT-------------AA------AA--A
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4216757 26 -  43346337 ttt-acc--tga---aa--tttaaaa------gt-------------aa------aat-a
i Loxodonta_africana.GL010049.1                          I 220 C 0
s Lycaon_pictus.CM007581.1                                17954555 26 -  59628241 tta-aac--tga---aa--tttgaaa------tt-------------aa------aat-a
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               6418 26 +     40492 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-G
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59675677 26 +  60120075 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-G
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 12190 26 -     26193 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-G
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            79974 26 -    114318 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-G
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  5665 26 -     23192 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-G
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                15134 26 -     29190 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-G
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  23699 26 +     37952 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-G
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186838788 26 + 187317192 tta-acc--tga---aa--tttgaaa------tt-------------aa------aat-g
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25457351 26 -  25927173 tta-acc--tga---aa--tttgaaa------tt-------------aa------aat-g
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  79547 26 +     89720 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-G
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 6548 26 +     20474 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-G
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   6348 26 -     14993 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-G
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  329214 26 -    668171 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-G
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 4664 26 -     24072 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-G
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               25286 26 -     45290 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-G
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90049 26 +     94391 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23936882 25 -  24302211 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT--
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               351011 25 +    752769 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT--
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33101803 22 -  40650429 tca-CCT-GA-----AA--TTTCAAG------tt-------------aa------a----
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         9757 26 -    207569 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              9462 26 +     13704 TTA-ACC--TGA---AA--CTTGAAA------TT-------------AA------AAT-A
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 32252 23 +    140813 CTG-ATC--T-----GAAATTTGAAG------TT-------------AA------A----
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12181739 23 -  29670104 TTG-ATC--T-----GAAATTTGAca------tt-------------aa------a----
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                5246 14 -      7380 TTA-ACC--TGA---AA--TTC--------------------------------------
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               4319 14 +     18990 TTA-ACC--TGA---AA--TTC--------------------------------------
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      5258 14 -      7356 TTA-ACC--TGA---AA--TTC--------------------------------------
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18291029 25 -  93316391 TTA-ACc--tga---aa--tttgaaa------t-------------g-a------aaa-a
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    21582 24 -    145209 -----------A---AC--TTGAAATGTGAAATT-------------AA------AAT-A
i Microgale_talazaci.MicTal_scaffold_6613                I 2 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                14833 26 -     19307 AGA-ACC--TGA---AA--TGTGCAA------TT-------------AA------AAT-A
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850069 26 +   8254450 TTA-ACC--Tga---aa--tttgaag------tt-------------aa------aat-a
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             33746 26 +     64694 TTA-ACC--TGA---AA--TTTGAAG------TT-------------AA------AAT-A
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           8603 26 -     28506 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         5141 26 -      8324 CTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-G
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      8573 25 -     37649 TTA-ACC--TGA---AA--TTTGAAA------T-------------G-A------AAA-A
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140777 26 -    366855 ATA-ACC--TGA---AA--TCTGCAA------TT-------------AA------AAT-A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   34861 26 +     37127 TTA-ATC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5940 26 +     14753 TTC-ACT--TCA---AA--TTTGAAA------TG-------------AA------AAT-A
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84360856 23 - 120012414 TTG-ATc--t-----gaaatttgaaa------tg-------------aa------a----
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87649857 23 - 129401213 TTG-ACC--T-----GAAATTTGAaa------tg-------------aa------a----
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31354512 23 -  89631738 TTG-ATc--t-----gaaatttgaaa------tt-------------aa------a----
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90751917 23 - 130317789 TTG-Acc--t-----aaaatttgaaa------tg-------------aa------a----
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               300646 26 -  14710649 TTA-ACc--tga---aa--cttgaaa------tt-------------aa------aaa-a
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                279113 26 -  10118263 TTC-ACC--tca---aa--tttgaaa------tg-------------aa------aat-a
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1586806 26 -   6019432 TTC-ACC--tca---aa--tttgaaa------tg-------------aa------aat-a
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902878 26 -   4330536 TTC-ATC--tca---aa--tttgaaa------tg-------------aa------aat-a
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              188196 26 +    196477 TTA-ACC--TGA---AA--TTTAAAA------TC-------------AA------AAT-A
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2033359 23 -   3037898 ttg-aaC--T-----GAAATTTGAAG------TT-------------AC------A----
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               14590 26 +     21681 TTA-AAC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306395 26 +  31847680 CTA-acc--tga---aa--tttgaaa------tt-------------aa------aat-g
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9148809 26 -   9404916 TTA-acc--tga---aa--tttgaaa------tt-------------aa------aat-a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102578998 25 - 196305487 ATA-ACC--TGA---AA--TTTGAGC------TT-------------AA------AA--C
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_771082                               843 25 -      2667 ATA-ACC--TGA---AA--TTTGAGC------TT-------------AA------AA--C
i Nycticebus_coucang.k141_771082                         C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749419 25 + 199412804 ATA-ACC--TGA---AA--TTTGAGC------TT-------------AA------AA--C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1362832 26 +   3988456 Tta-ata--tga---at--tttgaaa------tt-------------aa------aat-a
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              506080 26 -   2017862 CTA-acc--tga---aa--tttgaaa------tt-------------aa------aat-a
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   24671 12 +     28053 -------------------TTTGAAG------TT-------------AA------A----
i Ondatra_zibethicus.OndZib_scaffold_46174               I 792 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    79647 23 +    102263 TTG-ATA--T-----GAATTTTGCAG------TT-------------AA------A----
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9281 18 -     18566 -----------A---AC--TTGGAAT------TT-------------AA------AAT-A
i Orycteropus_afer.OryAfe_flattened_line_144387          I 2 C 0
s Oryctolagus_cuniculus.CM000791.1                        67146511 26 + 174332312 TTC-ATc--tga---at--ctttaaa------tt-------------aa------aat-a
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       461777 26 -    559221 TTa-atc--tga---aa--tttgaaa------tt-------------aa------aat-a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         3320 25 +      8798 GTA-ACC--TGA---AA--TTTGAGC------TT-------------AA------AA--A
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             695484 25 -   1103335 gta-acc--tga---aa--tttgagc------tt-------------aa------aa--a
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    43531 26 +     80009 TTA-Acc--aga---aa--tttgaaa------tt-------------aa------aat-a
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189142440 26 + 189151597 TTA-Acc--aga---aa--tttgaaa------tt-------------aa------aat-a
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  150612 26 +    230217 TCA-ACC--TGA---AA--CATGAAA------TT-------------AC------AAT-A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                263818 26 +  18783137 TCA-ACC--TGA---AA--CATGAAA------TT-------------AC------AAT-A
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4720456 26 -   8748460 TCA-ACC--TGA---AA--CATGAAA------TT-------------AC------AAT-A
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183442631 26 + 183742232 tta-acc--tga---aa--tttgaaa------tt-------------aa------aat-a
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             6329 26 +     20448 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563137 26 +  20919399 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   5073 26 +     41871 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     8358 26 +     27711 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  8439 26 +      9205 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12079 26 -     78924 TTA-ACC--TAT---GA--TTTGAAA------TT-------------AA------GAT-A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            9465 25 +     13100 ATA-ACC--TGA---AA--TTTGAGC------TT-------------AA------AA--A
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             7867 25 +     25941 ATA-ACC--TGA---AA--TTTGAGC------TT-------------AA------AA--A
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18194266 23 -  18517816 TTG-ATC--T-----TAAATTTGCAG------TT-------------aa------a----
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Piliocolobus_badius.k141_1234363                           43092 26 +     62158 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        37823 26 +     89929 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            39239 26 +     51399 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14295477 26 -  14605196 TTA-acc--tga---aa--tttgaaa------tt-------------aa------aat-a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1270 26 +     22620 GTC-ACC--TCT---GA--TTTGAAA------TG-------------AA------AAT-A
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189130571 26 + 189387572 TTA-acc--tga---aa--tttgaaa------tt-------------aa------aat-a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570179 26 +   9816681 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               72761 26 -     81375 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              4581 26 +     19060 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 12773 26 -     22811 TTA-ATC--TTC---AC--TTTAAAA------TA-------------AA------AGT-G
i Procavia_capensis.ProCapCap_scaffold_85530             I 363 C 0
s Prolemur_simus.MPIZ01000396.1                            2596292 24 -   4620579 TTa-acc--tga---aa--tttgaaa------tt-------------aa------a-a--
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990275 24 +   2598838 TTA-Acc--tga---aa--ttgaaat------t---------------a------aaa-a
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          28585 24 +     38485 TTA-ACC--TGA---AA--TTGAAAT------T---------------A------AAA-A
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                               628 24 -     13098 TTA-ACC--TGA---AA--TTGAAAT------T---------------A------AAA-A
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26106 24 +     35766 TTA-ACC--TGA---AA--TTGAAAT------T---------------A------AAA-A
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4293 24 -     24134 TTA-ACC--TGA---AA--TTGAAAT------T---------------A------AAA-A
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28118 24 -     67325 TTA-ACC--TGA---AA--TTGAAAT------T---------------A------AAA-A
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4341 24 -      6182 TTA-ACC--TGA---AA--TTGAAAT------T---------------A------AAA-A
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             9888 23 -     21651 TTG-TTC--T-----GAAATTTGAAG------TT-------------aa------a----
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            14133 12 -     21811 ----------------------gcaa------tt-------------aa------aat-a
i Pteronotus_parnellii.KE909381.1                        I 7 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39662 26 +     42204 TGA-ACC--TGA---AA--CTTGAAA------TT-------------AA------AAT-A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22976209 26 +  28871421 TTA-acc--tga---aa--tttgaaa------tt-------------aa------aat-a
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1359295 26 +   4952924 TTA-acc--tga---aa--tttgaaa------tt-------------aa------aat-a
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20273766 26 -  38429054 TCA-ACC--TGA---AA--cgtgaaa------tt-------------aa------aat-a
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             14590 26 -     91421 TTA-AAC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7608713 26 +   7812017 TTA-AAC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             14562 26 -     72585 TTA-AAC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53570130 23 +  90668790 TTG-CTC--T-----GAAATTTGAAG------TC-------------AA------A----
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             6277 26 -     11128 TTA-AAC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91235632 26 - 195417433 tta-aac--tga---aa--tttgaaa------tt-------------aa------aat-a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7671282 26 +   7961872 TTA-AAC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87230 26 -     96226 TTA-ACC--TGA---AA--TTTGGAA------TT-------------AA------AAT-A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               7651 14 -      8359 TTA-ACC--TGA---AA--TTC--------------------------------------
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_imperator.k141_2524406                             1611 14 +      2197 TTA-ACC--TGA---AA--TTC--------------------------------------
i Saguinus_imperator.k141_2524406                        C 0 C 0
s Saguinus_inustus.k141_699149                               13025 14 +     13640 TTA-ACC--TGA---AA--TTC--------------------------------------
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               7894 14 +      8564 TTA-ACC--TGA---AA--TTC--------------------------------------
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209468743 14 + 209938924 TTA-ACC--TGA---AA--TTC--------------------------------------
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 7452 14 -      9399 TTA-ACC--TGA---AA--TTC--------------------------------------
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119950373 14 - 121099817 TTA-ACC--Tga---aa--ttc--------------------------------------
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       22829 14 +     46362 TTA-ACC--TGA---AA--TTC--------------------------------------
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               22924 14 +     45824 TTA-ACC--TGA---AA--TTC--------------------------------------
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             39552 14 -     64574 TTA-ACC--TGA---AA--TTC--------------------------------------
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               2558 14 -     23631 TTA-ACC--TGA---AA--TTC--------------------------------------
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 22820 14 -     61129 TTA-ACC--TGA---AA--TTC--------------------------------------
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420148 14 -   5703754 TTA-ACC--TGA---AA--TTC--------------------------------------
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          55189 14 -     80660 TTA-ACC--TGA---AA--TTC--------------------------------------
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    152595 26 -    313613 ATC-TCC--TGA---AA--TTTGATA------TT-------------AA------AAT-C
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          19101 26 -     19888 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26304 26 +     39453 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            6823 26 +     27826 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             6344 26 -     19483 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      6412 26 +      7198 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         14670 26 +     15514 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11411 23 -     12148 TAA-ATC--T-----GAAATTTGAAG------TG-------------AA------A----
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               3229 26 +   1910179 TTC-ACC--TAA---AA--TTTGAAA------TT-------------AA------AAT-A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13650475 25 -  18376816 TTT-ACC--TAA---GA--t-tgaaa------ct-------------aa------aat-a
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1952676 22 -   3870691 tta-cct-gA-----AA--TTTGAAG------Tt-------------aa------a----
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30163 26 +     97271 TTA-GCC--TGA---AA--CTTGAAA------TT-------------AC------AAT-A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              17747 26 -    196729 TTA-ATC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6809921 26 +  69701581 Tta-act--tga---aa--ttttaaa------tt-------------aa------aat-a
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1092886 26 -   1523678 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 71556 26 +    116680 TTA-ACC--TGA---AA--TTTAAAA------TC-------------AA------AAT-A
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118180 26 -    156842 TTA-ACC--TGA---AA--TATGAAA------TT-------------AA------AAT-A
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    386633 26 +    539355 TTA-ACC--TGA---AA--TATGAAA------TT-------------AA------AAT-A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               25885 20 +     70052 TTA-ACC--TGA---AA--TTCACAT------TT--------------------------
i Tarsius_lariang.k141_2201908                           C 0 I 4
s Tarsius_wallacei.k141_254427                                 718 20 -     16117 TTA-ACC--TGA---AA--CTCACAT------TT--------------------------
i Tarsius_wallacei.k141_254427                           C 0 I 4
s Theropithecus_gelada.CM009954.1                        186428001 26 + 186847797 tta-acc--tga---aa--tttgaaa------tt-------------aa------aat-a
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   5408 26 +      8208 TT-AACC--TGA---AA--TTTGAGA------TC-------------A------AAAT-A
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     80364 25 +    610378 ATA-ACC--TGA---A---TTTTCAA------TT-------------AA------CAT-A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         10395 26 -     20410 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    14589 26 +     15221 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                       10496 26 +     19930 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       6923 26 -     19997 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            47047 26 -     60166 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        14518 26 -     27529 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     14462 26 -     18194 TTA-ATC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           8190 26 -     21137 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    6893 26 -     10723 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         6049 26 +      9834 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        24362 26 +     32220 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5938464 26 +   6242583 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        7716 26 +     20839 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4292687 26 +  10818551 tta-gcc--tta---aa--tttaaaa------tt-------------aa------aat-a
i Trichechus_manatus.JH594705.1                          I 531 C 0
s Tupaia_chinensis.KB320699.1                              2155114 19 +   4065304 TTA-ACC--TAA---CA--TTTgaaa------g---------------------------
i Tupaia_chinensis.KB320699.1                            C 0 I 2
s Tupaia_tana.TupTan_flattened_line_97126                     8762 19 -     10553 TTA-ACC--TAA---CA--TTTGAAA------T---------------------------
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 2
s Uropsilus_gracilis.UroGra_scaffold_12083                   52756 26 -     77625 TTC-ACC--TAA---AA--CTTGAAA------TT-------------AA------AAC-A
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4849867 26 -   5085361 TTA-acc--tga---aa--tttgaaa------tt-------------aa------aat-a
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  10951 25 +     50397 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT--
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11010 25 +     24756 TTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT--
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371309 12 -   5488506 ----------------------caaa------tt-------------aa------aat-a
i Vicugna_pacos.KN270157.1                               I 1 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10222 26 -     43706 CTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        23869 21 -     24430 TTA-CCC--A-----AA--TTTGAAG------TT-------------AA------A----
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          4588 26 +     86975 CTA-ACC--TGA---AA--TTTGAAA------TT-------------AA------AAT-A
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      14444 22 +     63895 TTG-AC---T-----GAAACTTAGtt------tt-------------gt------t----
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                10012  0 +     41958 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50341  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352  0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Colobus_guereza.LG01                                   199948958  0 + 200372422 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    136758  0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6209 2 +     62944 TT
s Acinonyx_jubatus.LLWD01001279.1                           826785 2 -   1699592 tt
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 3
s Acomys_cahirinus.AcoCah_scaffold_11939                     24838 2 -     89785 TT
i Acomys_cahirinus.AcoCah_scaffold_11939                 C 0 I 95
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510033 2 -  29979442 tt
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 3
s Ailurus_fulgens.LNAC01001112.1                             78804 1 -    347723 -t
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 3
s Allactaga_bullata.AllBul_scaffold_9566                     74160 2 -     89534 CT
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 41
s Allenopithecus_nigroviridis.k141_3361533                   14138 2 -     52922 TT
i Allenopithecus_nigroviridis.k141_3361533               C 0 I 2
s Allochrocebus_lhoesti.k141_4309873                         14074 2 -     28001 TT
i Allochrocebus_lhoesti.k141_4309873                     C 0 I 2
s Allochrocebus_preussi.k141_1442296                          4570 2 -     18505 TT
i Allochrocebus_preussi.k141_1442296                     C 0 I 2
s Allochrocebus_solatus.k141_166128                           5423 2 -     12518 TT
i Allochrocebus_solatus.k141_166128                      C 0 I 2
s Anoura_caudifer.AnoCau_scaffold_1412                      184534 2 +    412891 TT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 3
s Aplodontia_rufa.AprRuf_scaffold_68852                      11369 2 +     20879 TC
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 50
s Arctocebus_calabarensis.k141_2318572                       10860 2 +     14667 TT
i Arctocebus_calabarensis.k141_2318572                   C 0 I 2
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3941 2 +     43469 TT
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 3
s Avahi_laniger.k141_765380                                  53253 2 -     92717 TT
i Avahi_laniger.k141_765380                              C 0 I 2
s Avahi_peyrierasi.k141_1424874                              53880 2 +     85213 TT
i Avahi_peyrierasi.k141_1424874                          C 0 I 2
s Camelus_bactrianus.KN276810.1                           10001819 2 -  17673402 tt
i Camelus_bactrianus.KN276810.1                          C 0 I 3
s Camelus_dromedarius.KN272107.1                           2334277 2 -   7040546 tt
i Camelus_dromedarius.KN272107.1                         C 0 I 3
s Camelus_ferus.KB017975.1                                  402560 2 -   1652518 tt
i Camelus_ferus.KB017975.1                               C 0 I 3
s CanFam4.chr16                                           17798633 2 -  60362399 TT
i CanFam4.chr16                                          C 0 I 3
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184690 2 -    185531 TT
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 I 3
s Canis_lupus_dingo.QKWQ01000480.1                         9034076 2 -   9314153 tt
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 3
s Canis_lupus_familiaris.chr16                            17958341 2 -  59632846 tt
i Canis_lupus_familiaris.chr16                           C 0 I 3
s Canis_lupus_orion.HG994398.1                            18499853 2 +  63665305 tt
i Canis_lupus_orion.HG994398.1                           C 0 I 3
s Carlito_syrichta.NW_007247396.1                           200893 2 +    308752 tt
i Carlito_syrichta.NW_007247396.1                        I 4 I 1
s Carollia_perspicillata.CarPer_scaffold_92756                4304 2 -     11696 TT
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 3
s Catagonus_wagneri.CatWag_scaffold_2839                     92463 2 +    217609 TT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 3
s Cephalopachus_bancanus.k141_1423433                         4900 2 +     31688 TT
i Cephalopachus_bancanus.k141_1423433                    I 4 I 1
s Ceratotherium_simum.JH767749.1                          12230879 2 +  27778364 TT
i Ceratotherium_simum.JH767749.1                         C 0 I 3
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1906 2 -     25243 TT
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 I 3
s Cercocebus_atys.KQ010504.1                               4475087 2 +   4669795 tt
i Cercocebus_atys.KQ010504.1                             C 0 I 2
s Cercocebus_chrysogaster.k141_393940                        13632 2 -     19203 TT
i Cercocebus_chrysogaster.k141_393940                    C 0 I 2
s Cercocebus_lunulatus.k141_3342297                            248 2 -     14043 TT
i Cercocebus_lunulatus.k141_3342297                      C 0 I 2
s Cercocebus_torquatus.k141_3057011                           8284 2 +     27781 TT
i Cercocebus_torquatus.k141_3057011                      C 0 I 2
s Cercopithecus_ascanius.k141_1024104                         8445 2 -     20310 TT
i Cercopithecus_ascanius.k141_1024104                    C 0 I 2
s Cercopithecus_cephus.k141_1078548                          11424 2 +     29689 TT
i Cercopithecus_cephus.k141_1078548                      C 0 I 2
s Cercopithecus_diana.k141_1150327                            6182 2 -     20078 tt
i Cercopithecus_diana.k141_1150327                       N 0 I 2
s Cercopithecus_hamlyni.k141_187466                          14103 2 -     27936 TT
i Cercopithecus_hamlyni.k141_187466                      C 0 I 2
s Cercopithecus_lowei.k141_1854285                            2969 2 -     17152 TT
i Cercopithecus_lowei.k141_1854285                       C 0 I 2
s Cercopithecus_albogularis.ctg5                                38816504 2 +  39242232 TA
i Cercopithecus_albogularis.ctg5                               C 0 I 2
s Cercopithecus_mona.ctg39                                21222198 2 -  21565898 TT
i Cercopithecus_mona.ctg39                               C 0 I 2
s Cercopithecus_neglectus.k141_2526306                       39316 2 -     53127 TT
i Cercopithecus_neglectus.k141_2526306                   C 0 I 2
s Cercopithecus_nictitans.k141_3278028                        6584 2 +      7159 TA
i Cercopithecus_nictitans.k141_3278028                   C 0 I 2
s Cercopithecus_petaurista.k141_807961                       14119 2 -     27947 TT
i Cercopithecus_petaurista.k141_807961                   C 0 I 2
s Cercopithecus_pogonias.k141_822820                         14092 2 +     17596 TT
i Cercopithecus_pogonias.k141_822820                     C 0 I 2
s Cercopithecus_roloway.k141_2581234                           141 2 +     14005 tT
i Cercopithecus_roloway.k141_2581234                     N 0 I 2
s Chaetophractus_vellerosus.ChaVel_scaffold_713168            1902 2 -      2554 TC
i Chaetophractus_vellerosus.ChaVel_scaffold_713168       C 0 I 3
s Cheirogaleus_major.k141_333249                             20632 2 -     52598 TT
i Cheirogaleus_major.k141_333249                         C 0 I 2
s Cheirogaleus_medius.k141_1055463                           15997 2 +     57038 TT
i Cheirogaleus_medius.k141_1055463                       C 0 I 2
s Chlorocebus_aethiops.ctg25                              18428074 2 -  18827391 TT
i Chlorocebus_aethiops.ctg25                             C 0 I 2
s Chlorocebus_pygerythrus.k141_1025673                       14511 2 -     50209 TT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 I 2
s Chlorocebus_sabaeus.CM001947.1                         135421511 2 + 135778131 tt
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 2
s Choloepus_didactylus.ChoDid_scaffold_45914                 17321 2 +     19366 TT
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 I 3
s Choloepus_hoffmanni.KN194906.1                            172418 2 +    839153 tt
i Choloepus_hoffmanni.KN194906.1                         C 0 I 3
s Colobus_angolensis.KN981557.1                            1910020 2 +   2368649 tt
i Colobus_angolensis.KN981557.1                          C 0 I 2
s Colobus_polykomos.k141_906115                              36558 2 +     84244 TT
i Colobus_polykomos.k141_906115                          C 0 I 2
s Condylura_cristata.JH655891.1                           17547553 2 -  53390261 tt
i Condylura_cristata.JH655891.1                          C 0 I 3
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          13767 2 -     20389 tt
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 3
s Cricetomys_gambianus.CriGam_scaffold_18520                 49598 2 +     63868 TT
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 71
s Cricetulus_griseus.LT883664.1                           11667078 2 + 224834208 tt
i Cricetulus_griseus.LT883664.1                          C 0 I 86
s Crocidura_indochinensis.CroInd_scaffold_37019               2457 2 -     19598 TT
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 I 3
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27939 2 -     87169 TC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 3
s Ctenodactylus_gundi.CteGun_scaffold_65                    836647 2 +   1526836 TT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 20
s Dasypus_novemcinctus.JH564415.1                            62516 2 +   2246927 cc
i Dasypus_novemcinctus.JH564415.1                        C 0 I 3
s Daubentonia_madagascariensis.ctg71                      12536857 2 -  12879189 TT
i Daubentonia_madagascariensis.ctg71                     C 0 I 2
s Desmodus_rotundus.KZ672289.1                             8629318 2 +  20541912 tt
i Desmodus_rotundus.KZ672289.1                           C 0 I 3
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672730 2 +   1390856 TT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 3
s Diceros_bicornis.DicBicMic_scaffold_5955                    5482 2 +    198055 TT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 3
s Echinops_telfairi.JH980293.1                            48779878 2 + 111700974 tc
i Echinops_telfairi.JH980293.1                           C 0 I 2
s Eidolon_helvum.KE759718.1                                   9978 2 +     11740 tt
i Eidolon_helvum.KE759718.1                              C 0 I 3
s Elephantulus_edwardii.JH947257.1                         1097175 2 +  10337057 tt
i Elephantulus_edwardii.JH947257.1                       C 0 I 2
s Ellobius_lutescens.LOEQ01008920.1                          19834 2 -    110024 tt
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 80
s Ellobius_talpinus.LOJH01109367.1                            5927 2 -      6299 tt
i Ellobius_talpinus.LOJH01109367.1                       C 0 I 75
s Enhydra_lutris.KZ291758.1                               16328771 2 -  41312741 tt
i Enhydra_lutris.KZ291758.1                              C 0 I 3
s Eptesicus_fuscus.JH977646.1                              2144902 2 -  14770903 tt
i Eptesicus_fuscus.JH977646.1                            C 0 I 3
s Equus_asinus.JREZ01000139.1                              1282794 2 +   4378816 tt
i Equus_asinus.JREZ01000139.1                            C 0 I 3
s Equus_caballus.CM000403.2                               18530615 2 -  39960074 tt
i Equus_caballus.CM000403.2                              C 0 I 3
s Equus_przewalskii.KK951119.1                               32630 2 +    498745 tt
i Equus_przewalskii.KK951119.1                           C 0 I 3
s Erythrocebus_patas.Contig38                             21204682 2 -  21539334 TT
i Erythrocebus_patas.Contig38                            C 0 I 2
s Eulemur_albifrons.k141_342033                              13357 2 -     14127 TT
i Eulemur_albifrons.k141_342033                          C 0 I 2
s Eulemur_collaris.k141_377015                                6057 2 -     16928 TT
i Eulemur_collaris.k141_377015                           C 0 I 2
s Eulemur_coronatus.k141_885031                              15084 2 -     25546 TT
i Eulemur_coronatus.k141_885031                          C 0 I 2
s Eulemur_flavifrons.k141_1184614                            12293 2 +     26330 TT
i Eulemur_flavifrons.k141_1184614                        C 0 I 2
s Eulemur_fulvus.k141_544389                                 13521 2 +     23973 TT
i Eulemur_fulvus.k141_544389                             C 0 I 2
s Eulemur_macaco.k141_1562045                                12290 2 +     75513 TT
i Eulemur_macaco.k141_1562045                            C 0 I 2
s Eulemur_mongoz.k141_232305                                 10216 2 +     97555 TT
i Eulemur_mongoz.k141_232305                             C 0 I 2
s Eulemur_rubriventer.k141_571033                            13147 2 +     26496 TT
i Eulemur_rubriventer.k141_571033                        C 0 I 2
s Eulemur_rufus.k141_1476633                                  3757 2 -     17153 TT
i Eulemur_rufus.k141_1476633                             C 0 I 2
s Eulemur_sanfordi.k141_1122526                              13332 2 +    111500 TT
i Eulemur_sanfordi.k141_1122526                          C 0 I 2
s Felis_catus.CM001381.2                                  20236436 2 + 206538554 tt
i Felis_catus.CM001381.2                                 C 0 I 3
s Felis_catus_fca126.CM031415.1                           20195279 2 + 205367284 tt
i Felis_catus_fca126.CM031415.1                          C 0 I 3
s Felis_nigripes.FelNig_flattened_line_20823                  8793 2 -     36744 TT
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 3
s Galago_moholi.ctg2040                                     425813 2 -    453645 TT
i Galago_moholi.ctg2040                                  C 0 I 2
s Galago_senegalensis.k141_631886                             3520 2 +     11339 TT
i Galago_senegalensis.k141_631886                        C 0 I 2
s Galagoides_demidoff.k141_1711393                             823 2 +     41679 TT
i Galagoides_demidoff.k141_1711393                       C 0 I 2
s Galeopterus_variegatus.GalVar_scaffold_108840                696 2 -      9135 TT
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 I 2
s Gorilla_beringei.k141_3596273                              15464 2 -     32273 TT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186337610 2 + 186649187 tt
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6403 2 -     19426 TT
i Hapalemur_alaotrensis.k141_170648                      C 0 I 2
s Hapalemur_gilberti.k141_488810                             11552 2 -     15286 TT
i Hapalemur_gilberti.k141_488810                         C 0 I 2
s Hapalemur_griseus.k141_1511508                             13191 2 +     18253 TT
i Hapalemur_griseus.k141_1511508                         C 0 I 2
s Hapalemur_meridionalis.k141_248335                         13292 2 -     41752 TT
i Hapalemur_meridionalis.k141_248335                     C 0 I 2
s Hapalemur_occidentalis.k141_907772                         13129 2 -     16460 TT
i Hapalemur_occidentalis.k141_907772                     C 0 I 2
s Helogale_parvula.HelPar_flattened_line_2585               241774 2 +    327341 TC
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 3
s Heterohyrax_brucei.HetBruBak_scaffold_122365                 344 2 +      7595 TT
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 I 2
s Hoolock_leuconedys.ctg274                                    434277 2 +    630532 TT
i Hoolock_leuconedys.ctg274                                 C 0 I 2
s Hyaena_hyaena.HyaHya_flattened_line_26932                  43934 2 +     55795 TT
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 3
s Hylobates_agilis.k141_232023                                2043 2 -     12752 TT
i Hylobates_agilis.k141_232023                           C 0 I 2
s Hylobates_klossii.k141_240831                               2087 2 +     14092 TT
i Hylobates_klossii.k141_240831                          C 0 I 2
s Hylobates_pileatus_b.LG02                                     189542870 2 - 191637585 TT
i Hylobates_pileatus_b.LG02                                     C 0 I 2
s Hylobates_pileatus_a.tarseq_633                            3335765 2 -  11177569 TT
i Hylobates_pileatus_a.tarseq_633                          C 0 I 2
s Ictidomys_tridecemlineatus.JH393364.1                    7519513 2 -   7955117 tt
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 42
s Indri_indri.k141_3655594                                   22074 2 +     31101 TT
i Indri_indri.k141_3655594                               C 0 I 2
s Lasiurus_borealis.LasBor_scaffold_32767                    13310 2 -     42476 CT
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 3
s Lemur_catta.scaffold_24                                 15523638 2 -  30322482 TT
i Lemur_catta.scaffold_24                                C 0 I 2
s Lepilemur_ankaranensis.k141_596936                         10531 2 -     23766 TT
i Lepilemur_ankaranensis.k141_596936                     C 0 I 2
s Lepilemur_dorsalis.k141_577674                             28593 2 +     45836 TT
i Lepilemur_dorsalis.k141_577674                         C 0 I 2
s Lepilemur_ruficaudatus.k141_121139                          1132 2 +     25010 TT
i Lepilemur_ruficaudatus.k141_121139                     C 0 I 2
s Lepilemur_septentrionalis.k141_185316                      26529 2 +     54090 TT
i Lepilemur_septentrionalis.k141_185316                  C 0 I 2
s Leptonychotes_weddellii.KB714746.1                       3042299 2 +   3914936 tt
i Leptonychotes_weddellii.KB714746.1                     C 0 I 3
s Lepus_americanus.LepAme_scaffold_107385                     5708 2 -     14121 AT
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 2
s Lophocebus_aterrimus.ctg367                              1436634 2 +   1826925 TT
i Lophocebus_aterrimus.ctg367                            C 0 I 2
s Loris_lydekkerianus.k141_2539221                            5194 2 +     11245 TT
i Loris_lydekkerianus.k141_2539221                       C 0 I 2
s Loris_tardigradus.ctg83                                  1004044 2 +   6120653 TT
i Loris_tardigradus.ctg83                                C 0 I 2
s Loxodonta_africana.GL010049.1                            4216783 2 -  43346337 tt
i Loxodonta_africana.GL010049.1                          C 0 I 2
s Lycaon_pictus.CM007581.1                                17954581 2 -  59628241 tt
i Lycaon_pictus.CM007581.1                               C 0 I 3
s Macaca_arctoides.k141_2326796                               6444 2 +     40492 TT
i Macaca_arctoides.k141_2326796                          C 0 I 2
s Macaca_assamensis.Contig5                               59675703 2 +  60120075 TT
i Macaca_assamensis.Contig5                              C 0 I 2
s Macaca_cyclopis.k119_18836                                 12216 2 -     26193 TT
i Macaca_cyclopis.k119_18836                             C 0 I 2
s Macaca_fascicularis.k141_814140                            80000 2 -    114318 TT
i Macaca_fascicularis.k141_814140                        C 0 I 2
s Macaca_fuscata.k119_255327                                  5691 2 -     23192 TT
i Macaca_fuscata.k119_255327                             C 0 I 2
s Macaca_leonina.k141_3550399                                15160 2 -     29190 TT
i Macaca_leonina.k141_3550399                            C 0 I 2
s Macaca_maura.k141_2733130                                  23725 2 +     37952 TT
i Macaca_maura.k141_2733130                              C 0 I 2
s Macaca_mulatta.NC_041758.1                             186838814 2 + 187317192 tt
i Macaca_mulatta.NC_041758.1                             C 0 I 2
s Macaca_nemestrina.KQ007038.1                            25457377 2 -  25927173 tt
i Macaca_nemestrina.KQ007038.1                           C 0 I 2
s Macaca_nigra.k141_1655396                                  79573 2 +     89720 TT
i Macaca_nigra.k141_1655396                              C 0 I 2
s Macaca_radiata.k141_3680011                                 6574 2 +     20474 TT
i Macaca_radiata.k141_3680011                            C 0 I 2
s Macaca_siberu.k141_635500                                   6374 2 -     14993 TT
i Macaca_siberu.k141_635500                              C 0 I 2
s Macaca_silenus.Contig273                                  329240 2 -    668171 TT
i Macaca_silenus.Contig273                               C 0 I 2
s Macaca_thibetana.k99_256239                                 4690 2 -     24072 TT
i Macaca_thibetana.k99_256239                            C 0 I 2
s Macaca_tonkeana.k141_1498238                               25312 2 -     45290 TT
i Macaca_tonkeana.k141_1498238                           C 0 I 2
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90075 2 +     94391 CT
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 3
s Mandrillus_leucophaeus.scaffold280                      23936907 2 -  24302211 TT
i Mandrillus_leucophaeus.scaffold280                     C 0 I 2
s Mandrillus_sphinx.Contig270                               351036 2 +    752769 TT
i Mandrillus_sphinx.Contig270                            C 0 I 2
s Marmota_marmota.CZRN01000018.1                          33101825 2 -  40650429 ta
i Marmota_marmota.CZRN01000018.1                         C 0 I 42
s Megaderma_lyra.MegLyr_scaffold_4542                         9783 2 -    207569 TT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 3
s Mellivora_capensis.MelCap_flattened_line_69365              9488 2 +     13704 TT
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 3
s Meriones_unguiculatus.MerUng_scaffold_7390                 32275 2 +    140813 TT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 72
s Mesocricetus_auratus.KB708134.1                         12181762 2 -  29670104 tt
i Mesocricetus_auratus.KB708134.1                        C 0 I 80
s Microcebus_murinus.CM007674.1                           18291054 2 -  93316391 tt
i Microcebus_murinus.CM007674.1                          C 0 I 2
s Microgale_talazaci.MicTal_scaffold_6613                    21606 2 -    145209 TC
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 2
s Micronycteris_hirsuta.MicHir_scaffold_52381                14859 2 -     19307 TT
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 3
s Miniopterus_natalensis.LDJU01000034.1                    1850095 2 +   8254450 ct
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 3
s Miniopterus_schreibersii.MinSch_scaffold_18080             33772 2 +     64694 CT
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 3
s Miopithecus_ogouensis.k141_534055                           8629 2 -     28506 TT
i Miopithecus_ogouensis.k141_534055                      C 0 I 2
s Mirounga_angustirostris.MirAng_flattened_line_93702         5167 2 -      8324 TT
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 3
s Mirza_zaza.k141_952172                                      8598 2 -     37649 TT
i Mirza_zaza.k141_952172                                 C 0 I 2
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140803 2 -    366855 TT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 3
s Mungos_mungo.MunMun_flattened_line_23663                   34887 2 +     37127 TC
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 3
s Murina_feae.MurFea_scaffold_85699                           5966 2 +     14753 TT
i Murina_feae.MurFea_scaffold_85699                      C 0 I 3
s Mus_caroli.LT608237.1                                   84360879 2 - 120012414 tt
i Mus_caroli.LT608237.1                                  C 0 I 83
s Mus_musculus.chr8                                       87649880 2 - 129401213 tt
i Mus_musculus.chr8                                      C 0 I 80
s Mus_pahari.LT608297.1                                   31354535 2 -  89631738 tt
i Mus_pahari.LT608297.1                                  C 0 I 81
s Mus_spretus.CM004101.1                                  90751940 2 - 130317789 tt
i Mus_spretus.CM004101.1                                 C 0 I 81
s Mustela_putorius.JH418006.1                               300672 2 -  14710649 tt
i Mustela_putorius.JH418006.1                            C 0 I 3
s Myotis_brandtii.KE162005.1                                279139 2 -  10118263 tt
i Myotis_brandtii.KE162005.1                             C 0 I 3
s Myotis_davidii.KB100139.1                                1586832 2 -   6019432 tt
i Myotis_davidii.KB100139.1                              C 0 I 3
s Myotis_lucifugus.GL429869.1                              3902904 2 -   4330536 tt
i Myotis_lucifugus.GL429869.1                            C 0 I 3
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              188222 2 +    196477 TT
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 I 3
s Nannospalax_galili.KL204047.1                            2033382 2 -   3037898 TT
i Nannospalax_galili.KL204047.1                          C 0 I 67
s Nasalis_larvatus.k141_413338                               14616 2 +     21681 TT
i Nasalis_larvatus.k141_413338                           C 0 I 2
s Neomonachus_schauinslandi.NINY01007730.1                20306421 2 +  31847680 tt
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 3
s Nyctereutes_procyonoides.CAJHUB010000658.1               9148835 2 -   9404916 tt
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 3
s Nycticebus_bengalensis.LG01                            102579023 2 - 196305487 TT
i Nycticebus_bengalensis.LG01                            C 0 I 2
s Nycticebus_coucang.k141_771082                               868 2 -      2667 TT
i Nycticebus_coucang.k141_771082                         C 0 I 2
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749444 2 + 199412804 TT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 2
s Ochotona_princeps.JH802162.1                             1362858 2 +   3988456 at
i Ochotona_princeps.JH802162.1                           C 0 I 2
s Odobenus_rosmarus.KB229312.1                              506106 2 -   2017862 tt
i Odobenus_rosmarus.KB229312.1                           C 0 I 3
s Ondatra_zibethicus.OndZib_scaffold_46174                   24683 2 +     28053 TT
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 68
s Onychomys_torridus.OnyTor_scaffold_2986                    79670 2 +    102263 CT
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 83
s Orycteropus_afer.OryAfe_flattened_line_144387               9299 2 -     18566 TT
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 I 2
s Oryctolagus_cuniculus.CM000791.1                        67146537 2 + 174332312 at
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 2
s Otocyon_megalotis.JAEUCK010005147.1                       461803 2 -    559221 tt
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 3
s Otolemur_crassicaudatus.k141_222918                         3345 2 +      8798 TT
i Otolemur_crassicaudatus.k141_222918                    C 0 I 2
s Otolemur_garnettii.GL873799.1                             695509 2 -   1103335 tt
i Otolemur_garnettii.GL873799.1                          C 0 I 2
s Pan_paniscus.KQ411613.1                                    43557 2 +     80009 tt
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189142466 2 + 189151597 tt
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  150638 2 +    230217 TT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 3
s Panthera_pardus.KV860321.1                                263844 2 +  18783137 GC
i Panthera_pardus.KV860321.1                             C 0 I 3
s Panthera_tigris.KE722367.1                               4720482 2 -   8748460 GT
i Panthera_tigris.KE722367.1                             C 0 I 3
s Papio_anubis.CM001495.2                                183442657 2 + 183742232 tt
i Papio_anubis.CM001495.2                                C 0 I 2
s Papio_cynocephalus.k141_4307930                             6355 2 +     20448 TT
i Papio_cynocephalus.k141_4307930                        C 0 I 2
s Papio_hamadryas.Contig39                                20563163 2 +  20919399 TT
i Papio_hamadryas.Contig39                               C 0 I 2
s Papio_kindae.k141_1936966                                   5099 2 +     41871 TT
i Papio_kindae.k141_1936966                              C 0 I 2
s Papio_papio.k141_802527                                     8384 2 +     27711 TT
i Papio_papio.k141_802527                                C 0 I 2
s Papio_ursinus.k141_3428135                                  8465 2 +      9205 TT
i Papio_ursinus.k141_3428135                             C 0 I 2
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12105 2 -     78924 TC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 4
s Perodicticus_ibeanus.k141_855320                            9490 2 +     13100 TT
i Perodicticus_ibeanus.k141_855320                       C 0 I 2
s Perodicticus_potto.k141_1092580                             7892 2 +     25941 TT
i Perodicticus_potto.k141_1092580                        C 0 I 2
s Peromyscus_maniculatus.KI615324.1                       18194289 2 -  18517816 ct
i Peromyscus_maniculatus.KI615324.1                      C 0 I 83
s Piliocolobus_badius.k141_1234363                           43118 2 +     62158 TT
i Piliocolobus_badius.k141_1234363                       C 0 I 2
s Piliocolobus_gordonorum.k141_381342                        37849 2 +     89929 TT
i Piliocolobus_gordonorum.k141_381342                    C 0 I 2
s Piliocolobus_kirkii.k141_448987                            39265 2 +     51399 TT
i Piliocolobus_kirkii.k141_448987                        C 0 I 2
s Piliocolobus_tephrosceles.PDMG02000141.1                14295503 2 -  14605196 tt
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 2
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1296 2 +     22620 TT
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 3
s Pongo_abelii.CM009266.2                                189130597 2 + 189387572 tt
i Pongo_abelii.CM009266.2                                C 0 I 2
s Pongo_pygmaeus.ctg66                                     9570205 2 +   9816681 TT
i Pongo_pygmaeus.ctg66                                   C 0 I 2
s Presbytis_comata.k141_677006                               72787 2 -     81375 TT
i Presbytis_comata.k141_677006                           C 0 I 2
s Presbytis_mitrata.k141_1087752                              4607 2 +     19060 TT
i Presbytis_mitrata.k141_1087752                         C 0 I 2
s Procavia_capensis.ProCapCap_scaffold_85530                 12799 2 -     22811 TT
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 I 2
s Prolemur_simus.MPIZ01000396.1                            2596316 2 -   4620579 tt
i Prolemur_simus.MPIZ01000396.1                          C 0 I 2
s Propithecus_coquerelli.NW_012148875.1                     990299 2 +   2598838 tt
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 2
s Propithecus_coronatus.k141_347390                          28609 2 +     38485 TT
i Propithecus_coronatus.k141_347390                      C 0 I 2
s Propithecus_diadema.k141_58108                               652 2 -     13098 TT
i Propithecus_diadema.k141_58108                         C 0 I 2
s Propithecus_edwardsi.k141_1176054                          26130 2 +     35766 TT
i Propithecus_edwardsi.k141_1176054                      C 0 I 2
s Propithecus_perrieri.k141_1200571                           4317 2 -     24134 TT
i Propithecus_perrieri.k141_1200571                      C 0 I 2
s Propithecus_tattersalli.k141_790011                        28142 2 -     67325 TT
i Propithecus_tattersalli.k141_790011                    C 0 I 2
s Propithecus_verreauxi.k141_956661                           4365 2 -      6182 TT
i Propithecus_verreauxi.k141_956661                      C 0 I 2
s Psammomys_obesus.NESX01036370.1                             9911 2 -     21651 tt
i Psammomys_obesus.NESX01036370.1                        C 0 I 75
s Pteronotus_parnellii.KE909381.1                            14145 2 -     21811 tt
i Pteronotus_parnellii.KE909381.1                        C 0 I 3
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39688 2 +     42204 TT
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 3
s Pteropus_alecto.KB030862.1                              22976235 2 +  28871421 tt
i Pteropus_alecto.KB030862.1                             C 0 I 3
s Pteropus_vampyrus.KN525825.1                             1359321 2 +   4952924 tt
i Pteropus_vampyrus.KN525825.1                           C 0 I 3
s Puma_concolor.QAVW01001104.1                            20273792 2 -  38429054 tt
i Puma_concolor.QAVW01001104.1                           C 0 I 3
s Pygathrix_cinerea.k141_1153803                             14616 2 -     91421 TT
i Pygathrix_cinerea.k141_1153803                         C 0 I 2
s Pygathrix_nigripes_b.ctg100                                 7608739 2 +   7812017 TT
i Pygathrix_nigripes_b.ctg100                               C 0 I 2
s Pygathrix_nigripes_a.k141_215492                             14588 2 -     72585 TT
i Pygathrix_nigripes_a.k141_215492                         C 0 I 2
s Rattus_norvegicus.chr16                                 53570153 2 +  90668790 tt
i Rattus_norvegicus.chr16                                C 0 I 80
s Rhinopithecus_bieti.k119_217274                             6303 2 -     11128 TT
i Rhinopithecus_bieti.k119_217274                        C 0 I 2
s Rhinopithecus_roxellana.NC_044550.1                     91235658 2 - 195417433 tt
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 2
s Rhinopithecus_strykeri.ctg102                            7671308 2 +   7961872 TT
i Rhinopithecus_strykeri.ctg102                          C 0 I 2
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87256 2 -     96226 TT
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 3
s Scalopus_aquaticus.ScaAqu_scaffold_662                    152621 2 -    313613 TT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 3
s Semnopithecus_entellus.k141_11662                          19127 2 -     19888 TT
i Semnopithecus_entellus.k141_11662                      C 0 I 2
s Semnopithecus_hypoleucos.k141_1615806                      26330 2 +     39453 TT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 I 2
s Semnopithecus_johnii.k141_670120                            6849 2 +     27826 TT
i Semnopithecus_johnii.k141_670120                       C 0 I 2
s Semnopithecus_priam.k141_638794                             6370 2 -     19483 TT
i Semnopithecus_priam.k141_638794                        C 0 I 2
s Semnopithecus_schistaceus.k141_1584426                      6438 2 +      7198 TT
i Semnopithecus_schistaceus.k141_1584426                 C 0 I 2
s Semnopithecus_vetulus.k141_1200928                         14696 2 +     15514 TT
i Semnopithecus_vetulus.k141_1200928                     C 0 I 2
s Sigmodon_hispidus.SigHis_scaffold_60841                    11434 2 -     12148 TT
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 I 71
s Solenodon_paradoxus.SolPar_flattened_line_126               3255 2 +   1910179 TT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 1
s Sorex_araneus.JH798187.1                                13650500 2 -  18376816 tt
i Sorex_araneus.JH798187.1                               C 0 I 3
s Spermophilus_dauricus.KZ294078.1                         1952698 2 -   3870691 tt
i Spermophilus_dauricus.KZ294078.1                       C 0 I 42
s Spilogale_gracilis.SpiGra_flattened_line_13525             30189 2 +     97271 TT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 3
s Suricata_suricatta.SurSur_flattened_line_6629              17773 2 -    196729 TC
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 3
s Sus_scrofa.CM000828.4                                    6809947 2 +  69701581 tt
i Sus_scrofa.CM000828.4                                  C 0 I 2
s Symphalangus_syndactylus.tarseq_199                      1092912 2 -   1523678 TT
i Symphalangus_syndactylus.tarseq_199                    C 0 I 2
s Tamandua_tetradactyla.TamTet_scaffold_1782                 71582 2 +    116680 TT
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 I 3
s Tapirus_indicus.TapInd_scaffold_9301                      118206 2 -    156842 TT
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 3
s Tapirus_terrestris.TapTer_scaffold_755                    386659 2 +    539355 TT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 3
s Tarsius_lariang.k141_2201908                               25909 2 +     70052 TT
i Tarsius_lariang.k141_2201908                           I 4 I 4
s Tarsius_wallacei.k141_254427                                 742 2 -     16117 TT
i Tarsius_wallacei.k141_254427                           I 4 I 4
s Theropithecus_gelada.CM009954.1                        186428027 2 + 186847797 tt
i Theropithecus_gelada.CM009954.1                        C 0 I 2
s Tolypeutes_matacus.TolMat_scaffold_228639                   5434 2 +      8208 TT
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 I 3
s Tonatia_saurophila.TonSau_scaffold_294                     80389 2 +    610378 TG
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 3
s Trachypithecus_auratus.k141_722599                         10421 2 -     20410 TT
i Trachypithecus_auratus.k141_722599                     C 0 I 2
s Trachypithecus_crepusculus.k141_1194022                    14615 2 +     15221 TT
i Trachypithecus_crepusculus.k141_1194022                C 0 I 2
s Trachypithecus_cristatus.k141_580354                       10522 2 +     19930 TT
i Trachypithecus_cristatus.k141_580354                   C 0 I 2
s Trachypithecus_francoisi.k141_1412647                       6949 2 -     19997 TT
i Trachypithecus_francoisi.k141_1412647                  C 0 I 2
s Trachypithecus_geei.k141_277701                            47073 2 -     60166 TT
i Trachypithecus_geei.k141_277701                        C 0 I 2
s Trachypithecus_germaini.k141_912491                        14544 2 -     27529 TT
i Trachypithecus_germaini.k141_912491                    C 0 I 2
s Trachypithecus_hatinhensis.k141_143409                     14488 2 -     18194 TT
i Trachypithecus_hatinhensis.k141_143409                 C 0 I 2
s Trachypithecus_laotum.k141_907409                           8216 2 -     21137 TT
i Trachypithecus_laotum.k141_907409                      C 0 I 2
s Trachypithecus_leucocephalus.k141_587342                    6919 2 -     10723 TT
i Trachypithecus_leucocephalus.k141_587342               C 0 I 2
s Trachypithecus_melamera.k141_434728                         6075 2 +      9834 TT
i Trachypithecus_melamera.k141_434728                    C 0 I 2
s Trachypithecus_obscurus.k141_190785                        24388 2 +     32220 TT
i Trachypithecus_obscurus.k141_190785                    C 0 I 2
s Trachypithecus_phayrei.ctg124                            5938490 2 +   6242583 TT
i Trachypithecus_phayrei.ctg124                          C 0 I 2
s Trachypithecus_pileatus.k141_2007326                        7742 2 +     20839 TT
i Trachypithecus_pileatus.k141_2007326                   C 0 I 2
s Trichechus_manatus.JH594705.1                            4292713 2 +  10818551 tt
i Trichechus_manatus.JH594705.1                          C 0 I 2
s Tupaia_chinensis.KB320699.1                              2155135 2 +   4065304 tt
i Tupaia_chinensis.KB320699.1                            I 2 I 2
s Tupaia_tana.TupTan_flattened_line_97126                     8783 2 -     10553 TT
i Tupaia_tana.TupTan_flattened_line_97126                I 2 I 2
s Uropsilus_gracilis.UroGra_scaffold_12083                   52782 2 -     77625 TT
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 3
s Ursus_maritimus.KK499267.1                               4849893 2 -   5085361 tt
i Ursus_maritimus.KK499267.1                             C 0 I 3
s Varecia_rubra.k141_590885                                  10976 2 +     50397 TT
i Varecia_rubra.k141_590885                              C 0 I 2
s Varecia_variegata.k141_1128296                             11035 2 +     24756 TT
i Varecia_variegata.k141_1128296                         C 0 I 2
s Vicugna_pacos.KN270157.1                                 5371321 2 -   5488506 tt
i Vicugna_pacos.KN270157.1                               C 0 I 3
s Vulpes_lagopus.VulLag_flattened_line_30954                 10248 2 -     43706 TT
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 3
s Xerus_inauris.XerIna_scaffold_48378                        23890 2 -     24430 TT
i Xerus_inauris.XerIna_scaffold_48378                    C 0 I 48
s Zalophus_californianus.ZalCal_flattened_line_17732          4614 2 +     86975 TT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 3
s Zapus_hudsonius.ZapHud_scaffold_11398                      14466 2 +     63895 tt
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 48
e Sapajus_macrocephalus.k141_351809                          55203 0 -     80660 C
e Sapajus_apella.ctg103                                    5420162 0 -   5703754 C
e Saimiri_ustus.k141_1484609                                 22834 0 -     61129 C
e Saimiri_sciureus.k141_2278166                               2572 0 -     23631 C
e Saimiri_oerstedii.k141_1487881                             39566 0 -     64574 C
e Saimiri_macrodon.k141_716185                               22938 0 +     45824 C
e Saimiri_cassiquiarensis.k141_2188234                       22843 0 +     46362 C
e Saimiri_boliviensis.NW_024100920.1                     119950387 0 - 121099817 C
e Saguinus_mystax.k141_374627                                 7466 0 -      9399 C
e Saguinus_midas.LG03                                    209468757 0 + 209938924 C
e Saguinus_labiatus.k141_285685                               7908 0 +      8564 C
e Saguinus_inustus.k141_699149                               13039 0 +     13640 C
e Saguinus_imperator.k141_2524406                             1625 0 +      2197 C
e Saguinus_bicolor.k141_2619299                               7665 0 -      8359 C
e Mico_schneideri.k141_1950671                                      5272 0 -      7356 C
e Mico_humeralifer.k141_1976199                               4333 0 +     18990 C
e Mico_argentatus.k141_1239457                                5260 0 -      7380 C
e Leontopithecus_rosalia.k141_464620                         25192 0 +     66356 C
e Leontopithecus_chrysomelas.k141_1519602                    28495 0 +     38576 C
e Leontocebus_nigricollis.k141_4610752                        7027 0 +     35603 C
e Leontocebus_illigeri.k141_3350179                           4309 0 +      4941 C
e Leontocebus_fuscicollis.k141_1820339                        6985 0 +     64341 C
e Chiropotes_albinasus.k141_2813271                          10603 0 +     11226 C
e Cebus_unicolor.k141_544048                                 49404 0 -     74725 C
e Cebus_olivaceus.k141_398305                                 1071 0 +      1777 C
e Cebus_albifrons.Contig27                                25651495 0 +  26074798 C
e Cebuella_pygmaea.k141_1309012                               5443 0 -      7577 C
e Cebuella_niveiventris.k141_1251222                          9345 0 -     11392 C
e Callithrix_kuhlii.k119_1164682                             11431 0 -     12001 C
e Callithrix_jacchus.pat_scaffold_3                       23589900 0 - 189096842 C
e Callithrix_geoffroyi.k119_512088                            4686 0 +      5267 C
e Callimico_goeldii.k141_1091182                             24194 0 +     31915 C
e Callibella_humilis.k141_1278103                             4720 0 -     10423 C
e Aotus_vociferans.k141_344750                               28112 0 -     47192 C
e Aotus_trivirgatus.k141_2152450                             14988 0 -     34685 C
e Aotus_nancymaae.KZ198451.1                               4297383 0 -   5030052 C
e Aotus_griseimembra.k141_2240599                            14986 0 -     34016 C
e Aotus_azarae.k141_3104676                                  14966 0 -     33861 C
e Alouatta_seniculus.k141_117119                             14345 0 +     50774 C
e Alouatta_puruensis.k141_1253230                             3121 0 -      3544 C
e Alouatta_palliata.k141_2135620                              3021 0 +     47717 C
e Alouatta_nigerrima.k141_3472759                            17622 0 -     18578 C
e Alouatta_macconnelli.k141_918386                              51 0 -      9457 C
e Alouatta_juara.k141_1509701                                24326 0 +     25266 C
e Alouatta_discolor.k141_743489                               3116 0 -     45847 C
e Alouatta_caraya.k141_1743867                                2988 0 +      3134 C
e Alouatta_belzebul.k141_3238538                              2857 0 -     27731 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937 0 +    114563 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                10012 0 +     41958 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813 0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50341 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352 0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547 0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084 0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Colobus_guereza.LG01                                   199948958 0 + 200372422 C
e Chinchilla_lanigera.JH722012.1                           1251498 0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157 0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    136758 0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6211 1 +     62944 G
s Acinonyx_jubatus.LLWD01001279.1                           826790 1 -   1699592 t
i Acinonyx_jubatus.LLWD01001279.1                        I 3 C 0
s Acomys_cahirinus.AcoCah_scaffold_11939                     24935 1 -     89785 T
i Acomys_cahirinus.AcoCah_scaffold_11939                 I 95 n 95
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510038 1 -  29979442 t
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 3 C 0
s Ailurus_fulgens.LNAC01001112.1                             78808 1 -    347723 t
i Ailurus_fulgens.LNAC01001112.1                         I 3 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14142 1 -     52922 T
i Allenopithecus_nigroviridis.k141_3361533               I 2 C 0
s Allochrocebus_lhoesti.k141_4309873                         14078 1 -     28001 T
i Allochrocebus_lhoesti.k141_4309873                     I 2 C 0
s Allochrocebus_preussi.k141_1442296                          4574 1 -     18505 T
i Allochrocebus_preussi.k141_1442296                     I 2 C 0
s Allochrocebus_solatus.k141_166128                           5427 1 -     12518 T
i Allochrocebus_solatus.k141_166128                      I 2 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184539 1 +    412891 T
i Anoura_caudifer.AnoCau_scaffold_1412                   I 3 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      11421 1 +     20879 T
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 50 C 0
s Arctocebus_calabarensis.k141_2318572                       10864 1 +     14667 T
i Arctocebus_calabarensis.k141_2318572                   I 2 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3946 1 +     43469 T
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 3 C 0
s Avahi_laniger.k141_765380                                  53257 1 -     92717 T
i Avahi_laniger.k141_765380                              I 2 C 0
s Avahi_peyrierasi.k141_1424874                              53884 1 +     85213 T
i Avahi_peyrierasi.k141_1424874                          I 2 C 0
s Camelus_bactrianus.KN276810.1                           10001824 1 -  17673402 t
i Camelus_bactrianus.KN276810.1                          I 3 C 0
s Camelus_dromedarius.KN272107.1                           2334282 1 -   7040546 t
i Camelus_dromedarius.KN272107.1                         I 3 C 0
s Camelus_ferus.KB017975.1                                  402565 1 -   1652518 t
i Camelus_ferus.KB017975.1                               I 3 C 0
s Carlito_syrichta.NW_007247396.1                           200896 1 +    308752 t
i Carlito_syrichta.NW_007247396.1                        I 1 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                4309 1 -     11696 T
i Carollia_perspicillata.CarPer_scaffold_92756           I 3 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     92468 1 +    217609 T
i Catagonus_wagneri.CatWag_scaffold_2839                 I 3 C 0
s Cephalopachus_bancanus.k141_1423433                         4903 1 +     31688 T
i Cephalopachus_bancanus.k141_1423433                    I 1 C 0
s Ceratotherium_simum.JH767749.1                          12230884 1 +  27778364 G
i Ceratotherium_simum.JH767749.1                         I 3 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1911 1 -     25243 G
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 3 C 0
s Cercocebus_atys.KQ010504.1                               4475091 1 +   4669795 t
i Cercocebus_atys.KQ010504.1                             I 2 C 0
s Cercocebus_chrysogaster.k141_393940                        13636 1 -     19203 T
i Cercocebus_chrysogaster.k141_393940                    I 2 C 0
s Cercocebus_lunulatus.k141_3342297                            252 1 -     14043 T
i Cercocebus_lunulatus.k141_3342297                      I 2 C 0
s Cercocebus_torquatus.k141_3057011                           8288 1 +     27781 T
i Cercocebus_torquatus.k141_3057011                      I 2 C 0
s Cercopithecus_ascanius.k141_1024104                         8449 1 -     20310 T
i Cercopithecus_ascanius.k141_1024104                    I 2 C 0
s Cercopithecus_cephus.k141_1078548                          11428 1 +     29689 T
i Cercopithecus_cephus.k141_1078548                      I 2 C 0
s Cercopithecus_diana.k141_1150327                            6186 1 -     20078 T
i Cercopithecus_diana.k141_1150327                       I 2 C 0
s Cercopithecus_hamlyni.k141_187466                          14107 1 -     27936 T
i Cercopithecus_hamlyni.k141_187466                      I 2 C 0
s Cercopithecus_lowei.k141_1854285                            2973 1 -     17152 T
i Cercopithecus_lowei.k141_1854285                       I 2 C 0
s Cercopithecus_albogularis.ctg5                                38816508 1 +  39242232 T
i Cercopithecus_albogularis.ctg5                               I 2 C 0
s Cercopithecus_mona.ctg39                                21222202 1 -  21565898 T
i Cercopithecus_mona.ctg39                               I 2 C 0
s Cercopithecus_neglectus.k141_2526306                       39320 1 -     53127 T
i Cercopithecus_neglectus.k141_2526306                   I 2 C 0
s Cercopithecus_nictitans.k141_3278028                        6588 1 +      7159 T
i Cercopithecus_nictitans.k141_3278028                   I 2 C 0
s Cercopithecus_petaurista.k141_807961                       14123 1 -     27947 T
i Cercopithecus_petaurista.k141_807961                   I 2 C 0
s Cercopithecus_pogonias.k141_822820                         14096 1 +     17596 T
i Cercopithecus_pogonias.k141_822820                     I 2 C 0
s Cercopithecus_roloway.k141_2581234                           145 1 +     14005 T
i Cercopithecus_roloway.k141_2581234                     I 2 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_713168            1907 1 -      2554 T
i Chaetophractus_vellerosus.ChaVel_scaffold_713168       I 3 C 0
s Cheirogaleus_major.k141_333249                             20636 1 -     52598 T
i Cheirogaleus_major.k141_333249                         I 2 C 0
s Cheirogaleus_medius.k141_1055463                           16001 1 +     57038 T
i Cheirogaleus_medius.k141_1055463                       I 2 C 0
s Chlorocebus_aethiops.ctg25                              18428078 1 -  18827391 T
i Chlorocebus_aethiops.ctg25                             I 2 C 0
s Chlorocebus_pygerythrus.k141_1025673                       14515 1 -     50209 T
i Chlorocebus_pygerythrus.k141_1025673                   I 2 C 0
s Chlorocebus_sabaeus.CM001947.1                         135421515 1 + 135778131 t
i Chlorocebus_sabaeus.CM001947.1                         I 2 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 17326 1 +     19366 T
i Choloepus_didactylus.ChoDid_scaffold_45914             I 3 C 0
s Choloepus_hoffmanni.KN194906.1                            172423 1 +    839153 t
i Choloepus_hoffmanni.KN194906.1                         I 3 C 0
s Colobus_angolensis.KN981557.1                            1910024 1 +   2368649 t
i Colobus_angolensis.KN981557.1                          I 2 C 0
s Colobus_polykomos.k141_906115                              36562 1 +     84244 T
i Colobus_polykomos.k141_906115                          I 2 C 0
s Condylura_cristata.JH655891.1                           17547558 1 -  53390261 t
i Condylura_cristata.JH655891.1                          I 3 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          13772 1 -     20389 t
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 3 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 49671 1 +     63868 T
i Cricetomys_gambianus.CriGam_scaffold_18520             I 71 C 0
s Cricetulus_griseus.LT883664.1                           11667166 1 + 224834208 T
i Cricetulus_griseus.LT883664.1                          I 86 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27944 1 -     87169 T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 3 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    836669 1 +   1526836 T
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 20 C 0
s Dasypus_novemcinctus.JH564415.1                            62521 1 +   2246927 t
i Dasypus_novemcinctus.JH564415.1                        I 3 C 0
s Daubentonia_madagascariensis.ctg71                      12536861 1 -  12879189 T
i Daubentonia_madagascariensis.ctg71                     I 2 C 0
s Desmodus_rotundus.KZ672289.1                             8629323 1 +  20541912 t
i Desmodus_rotundus.KZ672289.1                           I 3 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672735 1 +   1390856 G
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 3 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    5487 1 +    198055 G
i Diceros_bicornis.DicBicMic_scaffold_5955               I 3 C 0
s Eidolon_helvum.KE759718.1                                   9983 1 +     11740 t
i Eidolon_helvum.KE759718.1                              I 3 C 0
s Ellobius_lutescens.LOEQ01008920.1                          19916 1 -    110024 T
i Ellobius_lutescens.LOEQ01008920.1                      I 80 C 0
s Ellobius_talpinus.LOJH01109367.1                            6004 1 -      6299 T
i Ellobius_talpinus.LOJH01109367.1                       I 75 C 0
s Enhydra_lutris.KZ291758.1                               16328776 1 -  41312741 t
i Enhydra_lutris.KZ291758.1                              I 3 C 0
s Eptesicus_fuscus.JH977646.1                              2144907 1 -  14770903 t
i Eptesicus_fuscus.JH977646.1                            I 3 C 0
s Equus_asinus.JREZ01000139.1                              1282799 1 +   4378816 t
i Equus_asinus.JREZ01000139.1                            I 3 C 0
s Equus_caballus.CM000403.2                               18530620 1 -  39960074 t
i Equus_caballus.CM000403.2                              I 3 C 0
s Equus_przewalskii.KK951119.1                               32635 1 +    498745 t
i Equus_przewalskii.KK951119.1                           I 3 C 0
s Erythrocebus_patas.Contig38                             21204686 1 -  21539334 T
i Erythrocebus_patas.Contig38                            I 2 C 0
s Eulemur_albifrons.k141_342033                              13361 1 -     14127 T
i Eulemur_albifrons.k141_342033                          I 2 C 0
s Eulemur_collaris.k141_377015                                6061 1 -     16928 T
i Eulemur_collaris.k141_377015                           I 2 C 0
s Eulemur_coronatus.k141_885031                              15088 1 -     25546 T
i Eulemur_coronatus.k141_885031                          I 2 C 0
s Eulemur_flavifrons.k141_1184614                            12297 1 +     26330 T
i Eulemur_flavifrons.k141_1184614                        I 2 C 0
s Eulemur_fulvus.k141_544389                                 13525 1 +     23973 T
i Eulemur_fulvus.k141_544389                             I 2 C 0
s Eulemur_macaco.k141_1562045                                12294 1 +     75513 T
i Eulemur_macaco.k141_1562045                            I 2 C 0
s Eulemur_mongoz.k141_232305                                 10220 1 +     97555 T
i Eulemur_mongoz.k141_232305                             I 2 C 0
s Eulemur_rubriventer.k141_571033                            13151 1 +     26496 T
i Eulemur_rubriventer.k141_571033                        I 2 C 0
s Eulemur_rufus.k141_1476633                                  3761 1 -     17153 T
i Eulemur_rufus.k141_1476633                             I 2 C 0
s Eulemur_sanfordi.k141_1122526                              13336 1 +    111500 T
i Eulemur_sanfordi.k141_1122526                          I 2 C 0
s Felis_catus.CM001381.2                                  20236441 1 + 206538554 t
i Felis_catus.CM001381.2                                 I 3 C 0
s Felis_catus_fca126.CM031415.1                           20195284 1 + 205367284 t
i Felis_catus_fca126.CM031415.1                          I 3 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  8798 1 -     36744 T
i Felis_nigripes.FelNig_flattened_line_20823             I 3 C 0
s Galago_moholi.ctg2040                                     425817 1 -    453645 T
i Galago_moholi.ctg2040                                  I 2 C 0
s Galago_senegalensis.k141_631886                             3524 1 +     11339 T
i Galago_senegalensis.k141_631886                        I 2 C 0
s Galagoides_demidoff.k141_1711393                             827 1 +     41679 T
i Galagoides_demidoff.k141_1711393                       I 2 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840                700 1 -      9135 T
i Galeopterus_variegatus.GalVar_scaffold_108840          I 2 C 0
s Gorilla_beringei.k141_3596273                              15466 1 -     32273 G
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186337612 1 + 186649187 g
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6407 1 -     19426 T
i Hapalemur_alaotrensis.k141_170648                      I 2 C 0
s Hapalemur_gilberti.k141_488810                             11556 1 -     15286 T
i Hapalemur_gilberti.k141_488810                         I 2 C 0
s Hapalemur_griseus.k141_1511508                             13195 1 +     18253 T
i Hapalemur_griseus.k141_1511508                         I 2 C 0
s Hapalemur_meridionalis.k141_248335                         13296 1 -     41752 T
i Hapalemur_meridionalis.k141_248335                     I 2 C 0
s Hapalemur_occidentalis.k141_907772                         13133 1 -     16460 T
i Hapalemur_occidentalis.k141_907772                     I 2 C 0
s Helogale_parvula.HelPar_flattened_line_2585               241779 1 +    327341 T
i Helogale_parvula.HelPar_flattened_line_2585            I 3 C 0
s Hoolock_leuconedys.ctg274                                    434281 1 +    630532 G
i Hoolock_leuconedys.ctg274                                 I 2 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  43939 1 +     55795 T
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 3 C 0
s Hylobates_agilis.k141_232023                                2047 1 -     12752 G
i Hylobates_agilis.k141_232023                           I 2 C 0
s Hylobates_klossii.k141_240831                               2091 1 +     14092 G
i Hylobates_klossii.k141_240831                          I 2 C 0
s Hylobates_pileatus_b.LG02                                     189542874 1 - 191637585 G
i Hylobates_pileatus_b.LG02                                     I 2 C 0
s Hylobates_pileatus_a.tarseq_633                            3335769 1 -  11177569 G
i Hylobates_pileatus_a.tarseq_633                          I 2 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7519557 1 -   7955117 T
i Ictidomys_tridecemlineatus.JH393364.1                  I 42 C 0
s Indri_indri.k141_3655594                                   22078 1 +     31101 T
i Indri_indri.k141_3655594                               I 2 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    13315 1 -     42476 T
i Lasiurus_borealis.LasBor_scaffold_32767                I 3 C 0
s Lemur_catta.scaffold_24                                 15523642 1 -  30322482 T
i Lemur_catta.scaffold_24                                I 2 C 0
s Lepilemur_ankaranensis.k141_596936                         10535 1 -     23766 T
i Lepilemur_ankaranensis.k141_596936                     I 2 C 0
s Lepilemur_dorsalis.k141_577674                             28597 1 +     45836 T
i Lepilemur_dorsalis.k141_577674                         I 2 C 0
s Lepilemur_ruficaudatus.k141_121139                          1136 1 +     25010 T
i Lepilemur_ruficaudatus.k141_121139                     I 2 C 0
s Lepilemur_septentrionalis.k141_185316                      26533 1 +     54090 T
i Lepilemur_septentrionalis.k141_185316                  I 2 C 0
s Leptonychotes_weddellii.KB714746.1                       3042304 1 +   3914936 t
i Leptonychotes_weddellii.KB714746.1                     I 3 C 0
s Lepus_americanus.LepAme_scaffold_107385                     5712 1 -     14121 T
i Lepus_americanus.LepAme_scaffold_107385                I 2 C 0
s Lophocebus_aterrimus.ctg367                              1436638 1 +   1826925 T
i Lophocebus_aterrimus.ctg367                            I 2 C 0
s Loris_lydekkerianus.k141_2539221                            5198 1 +     11245 T
i Loris_lydekkerianus.k141_2539221                       I 2 C 0
s Loris_tardigradus.ctg83                                  1004048 1 +   6120653 T
i Loris_tardigradus.ctg83                                I 2 C 0
s Macaca_arctoides.k141_2326796                               6448 1 +     40492 T
i Macaca_arctoides.k141_2326796                          I 2 C 0
s Macaca_assamensis.Contig5                               59675707 1 +  60120075 T
i Macaca_assamensis.Contig5                              I 2 C 0
s Macaca_cyclopis.k119_18836                                 12220 1 -     26193 T
i Macaca_cyclopis.k119_18836                             I 2 C 0
s Macaca_fascicularis.k141_814140                            80004 1 -    114318 T
i Macaca_fascicularis.k141_814140                        I 2 C 0
s Macaca_fuscata.k119_255327                                  5695 1 -     23192 T
i Macaca_fuscata.k119_255327                             I 2 C 0
s Macaca_leonina.k141_3550399                                15164 1 -     29190 T
i Macaca_leonina.k141_3550399                            I 2 C 0
s Macaca_maura.k141_2733130                                  23729 1 +     37952 T
i Macaca_maura.k141_2733130                              I 2 C 0
s Macaca_mulatta.NC_041758.1                             186838818 1 + 187317192 t
i Macaca_mulatta.NC_041758.1                             I 2 C 0
s Macaca_nemestrina.KQ007038.1                            25457381 1 -  25927173 t
i Macaca_nemestrina.KQ007038.1                           I 2 C 0
s Macaca_nigra.k141_1655396                                  79577 1 +     89720 T
i Macaca_nigra.k141_1655396                              I 2 C 0
s Macaca_radiata.k141_3680011                                 6578 1 +     20474 T
i Macaca_radiata.k141_3680011                            I 2 C 0
s Macaca_siberu.k141_635500                                   6378 1 -     14993 T
i Macaca_siberu.k141_635500                              I 2 C 0
s Macaca_silenus.Contig273                                  329244 1 -    668171 T
i Macaca_silenus.Contig273                               I 2 C 0
s Macaca_thibetana.k99_256239                                 4694 1 -     24072 T
i Macaca_thibetana.k99_256239                            I 2 C 0
s Macaca_tonkeana.k141_1498238                               25316 1 -     45290 T
i Macaca_tonkeana.k141_1498238                           I 2 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90080 1 +     94391 T
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 3 C 0
s Mandrillus_leucophaeus.scaffold280                      23936911 1 -  24302211 T
i Mandrillus_leucophaeus.scaffold280                     I 2 C 0
s Mandrillus_sphinx.Contig270                               351040 1 +    752769 T
i Mandrillus_sphinx.Contig270                            I 2 C 0
s Marmota_marmota.CZRN01000018.1                          33101869 1 -  40650429 T
i Marmota_marmota.CZRN01000018.1                         I 42 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         9788 1 -    207569 T
i Megaderma_lyra.MegLyr_scaffold_4542                    I 3 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              9493 1 +     13704 T
i Mellivora_capensis.MelCap_flattened_line_69365         I 3 C 0
s Mesocricetus_auratus.KB708134.1                         12181844 1 -  29670104 T
i Mesocricetus_auratus.KB708134.1                        I 80 C 0
s Microcebus_murinus.CM007674.1                           18291058 1 -  93316391 t
i Microcebus_murinus.CM007674.1                          I 2 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                14864 1 -     19307 T
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 3 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850100 1 +   8254450 t
i Miniopterus_natalensis.LDJU01000034.1                  I 3 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             33777 1 +     64694 T
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 3 C 0
s Miopithecus_ogouensis.k141_534055                           8633 1 -     28506 T
i Miopithecus_ogouensis.k141_534055                      I 2 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         5172 1 -      8324 T
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 3 C 0
s Mirza_zaza.k141_952172                                      8602 1 -     37649 T
i Mirza_zaza.k141_952172                                 I 2 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140808 1 -    366855 T
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 3 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   34892 1 +     37127 T
i Mungos_mungo.MunMun_flattened_line_23663               I 3 C 0
s Murina_feae.MurFea_scaffold_85699                           5971 1 +     14753 T
i Murina_feae.MurFea_scaffold_85699                      I 3 C 0
s Mus_caroli.LT608237.1                                   84360964 1 - 120012414 T
i Mus_caroli.LT608237.1                                  I 83 C 0
s Mus_musculus.chr8                                       87649962 1 - 129401213 T
i Mus_musculus.chr8                                      I 80 C 0
s Mus_pahari.LT608297.1                                   31354618 1 -  89631738 C
i Mus_pahari.LT608297.1                                  I 81 C 0
s Mus_spretus.CM004101.1                                  90752023 1 - 130317789 T
i Mus_spretus.CM004101.1                                 I 81 C 0
s Mustela_putorius.JH418006.1                               300677 1 -  14710649 t
i Mustela_putorius.JH418006.1                            I 3 C 0
s Myotis_brandtii.KE162005.1                                279144 1 -  10118263 t
i Myotis_brandtii.KE162005.1                             I 3 C 0
s Myotis_davidii.KB100139.1                                1586837 1 -   6019432 t
i Myotis_davidii.KB100139.1                              I 3 C 0
s Myotis_lucifugus.GL429869.1                              3902909 1 -   4330536 t
i Myotis_lucifugus.GL429869.1                            I 3 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              188227 1 +    196477 C
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 3 C 0
s Nannospalax_galili.KL204047.1                            2033451 1 -   3037898 T
i Nannospalax_galili.KL204047.1                          I 67 C 0
s Nasalis_larvatus.k141_413338                               14620 1 +     21681 T
i Nasalis_larvatus.k141_413338                           I 2 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306426 1 +  31847680 t
i Neomonachus_schauinslandi.NINY01007730.1               I 3 C 0
s Nycticebus_bengalensis.LG01                            102579027 1 - 196305487 T
i Nycticebus_bengalensis.LG01                            I 2 C 0
s Nycticebus_coucang.k141_771082                               872 1 -      2667 T
i Nycticebus_coucang.k141_771082                         I 2 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749448 1 + 199412804 T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 2 C 0
s Ochotona_princeps.JH802162.1                             1362862 1 +   3988456 t
i Ochotona_princeps.JH802162.1                           I 2 C 0
s Odobenus_rosmarus.KB229312.1                              506111 1 -   2017862 t
i Odobenus_rosmarus.KB229312.1                           I 3 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   24753 1 +     28053 T
i Ondatra_zibethicus.OndZib_scaffold_46174               I 68 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    79755 1 +    102263 T
i Onychomys_torridus.OnyTor_scaffold_2986                I 83 C 0
s Oryctolagus_cuniculus.CM000791.1                        67146541 1 + 174332312 t
i Oryctolagus_cuniculus.CM000791.1                       I 2 C 0
s Otolemur_crassicaudatus.k141_222918                         3349 1 +      8798 T
i Otolemur_crassicaudatus.k141_222918                    I 2 C 0
s Otolemur_garnettii.GL873799.1                             695513 1 -   1103335 t
i Otolemur_garnettii.GL873799.1                          I 2 C 0
s Pan_paniscus.KQ411613.1                                    43559 1 +     80009 g
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189142468 1 + 189151597 g
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  150643 1 +    230217 T
i Panthera_onca.PanOnc_flattened_line_3271               I 3 C 0
s Panthera_pardus.KV860321.1                                263849 1 +  18783137 T
i Panthera_pardus.KV860321.1                             I 3 C 0
s Panthera_tigris.KE722367.1                               4720487 1 -   8748460 T
i Panthera_tigris.KE722367.1                             I 3 C 0
s Papio_anubis.CM001495.2                                183442661 1 + 183742232 t
i Papio_anubis.CM001495.2                                I 2 C 0
s Papio_cynocephalus.k141_4307930                             6359 1 +     20448 T
i Papio_cynocephalus.k141_4307930                        I 2 C 0
s Papio_hamadryas.Contig39                                20563167 1 +  20919399 T
i Papio_hamadryas.Contig39                               I 2 C 0
s Papio_kindae.k141_1936966                                   5103 1 +     41871 T
i Papio_kindae.k141_1936966                              I 2 C 0
s Papio_papio.k141_802527                                     8388 1 +     27711 T
i Papio_papio.k141_802527                                I 2 C 0
s Papio_ursinus.k141_3428135                                  8469 1 +      9205 T
i Papio_ursinus.k141_3428135                             I 2 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12111 1 -     78924 T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 4 C 0
s Perodicticus_ibeanus.k141_855320                            9494 1 +     13100 T
i Perodicticus_ibeanus.k141_855320                       I 2 C 0
s Perodicticus_potto.k141_1092580                             7896 1 +     25941 T
i Perodicticus_potto.k141_1092580                        I 2 C 0
s Peromyscus_maniculatus.KI615324.1                       18194374 1 -  18517816 T
i Peromyscus_maniculatus.KI615324.1                      I 83 C 0
s Piliocolobus_badius.k141_1234363                           43122 1 +     62158 T
i Piliocolobus_badius.k141_1234363                       I 2 C 0
s Piliocolobus_gordonorum.k141_381342                        37853 1 +     89929 T
i Piliocolobus_gordonorum.k141_381342                    I 2 C 0
s Piliocolobus_kirkii.k141_448987                            39269 1 +     51399 T
i Piliocolobus_kirkii.k141_448987                        I 2 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14295507 1 -  14605196 t
i Piliocolobus_tephrosceles.PDMG02000141.1               I 2 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1301 1 +     22620 T
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 3 C 0
s Pongo_abelii.CM009266.2                                189130601 1 + 189387572 g
i Pongo_abelii.CM009266.2                                I 2 C 0
s Pongo_pygmaeus.ctg66                                     9570209 1 +   9816681 G
i Pongo_pygmaeus.ctg66                                   I 2 C 0
s Presbytis_comata.k141_677006                               72791 1 -     81375 T
i Presbytis_comata.k141_677006                           I 2 C 0
s Presbytis_mitrata.k141_1087752                              4611 1 +     19060 T
i Presbytis_mitrata.k141_1087752                         I 2 C 0
s Prolemur_simus.MPIZ01000396.1                            2596320 1 -   4620579 t
i Prolemur_simus.MPIZ01000396.1                          I 2 C 0
s Propithecus_coquerelli.NW_012148875.1                     990303 1 +   2598838 t
i Propithecus_coquerelli.NW_012148875.1                  I 2 C 0
s Propithecus_coronatus.k141_347390                          28613 1 +     38485 T
i Propithecus_coronatus.k141_347390                      I 2 C 0
s Propithecus_diadema.k141_58108                               656 1 -     13098 T
i Propithecus_diadema.k141_58108                         I 2 C 0
s Propithecus_edwardsi.k141_1176054                          26134 1 +     35766 T
i Propithecus_edwardsi.k141_1176054                      I 2 C 0
s Propithecus_perrieri.k141_1200571                           4321 1 -     24134 T
i Propithecus_perrieri.k141_1200571                      I 2 C 0
s Propithecus_tattersalli.k141_790011                        28146 1 -     67325 T
i Propithecus_tattersalli.k141_790011                    I 2 C 0
s Propithecus_verreauxi.k141_956661                           4369 1 -      6182 T
i Propithecus_verreauxi.k141_956661                      I 2 C 0
s Pteronotus_parnellii.KE909381.1                            14150 1 -     21811 t
i Pteronotus_parnellii.KE909381.1                        I 3 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39693 1 +     42204 T
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 3 C 0
s Pteropus_alecto.KB030862.1                              22976240 1 +  28871421 t
i Pteropus_alecto.KB030862.1                             I 3 C 0
s Pteropus_vampyrus.KN525825.1                             1359326 1 +   4952924 t
i Pteropus_vampyrus.KN525825.1                           I 3 C 0
s Puma_concolor.QAVW01001104.1                            20273797 1 -  38429054 t
i Puma_concolor.QAVW01001104.1                           I 3 C 0
s Pygathrix_cinerea.k141_1153803                             14620 1 -     91421 T
i Pygathrix_cinerea.k141_1153803                         I 2 C 0
s Pygathrix_nigripes_b.ctg100                                 7608743 1 +   7812017 T
i Pygathrix_nigripes_b.ctg100                               I 2 C 0
s Pygathrix_nigripes_a.k141_215492                             14592 1 -     72585 T
i Pygathrix_nigripes_a.k141_215492                         I 2 C 0
s Rattus_norvegicus.chr16                                 53570235 1 +  90668790 T
i Rattus_norvegicus.chr16                                I 80 C 0
s Rhinopithecus_bieti.k119_217274                             6307 1 -     11128 T
i Rhinopithecus_bieti.k119_217274                        I 2 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91235662 1 - 195417433 t
i Rhinopithecus_roxellana.NC_044550.1                    I 2 C 0
s Rhinopithecus_strykeri.ctg102                            7671312 1 +   7961872 T
i Rhinopithecus_strykeri.ctg102                          I 2 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87261 1 -     96226 T
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 3 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    152626 1 -    313613 T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 3 C 0
s Semnopithecus_entellus.k141_11662                          19131 1 -     19888 T
i Semnopithecus_entellus.k141_11662                      I 2 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26334 1 +     39453 T
i Semnopithecus_hypoleucos.k141_1615806                  I 2 C 0
s Semnopithecus_johnii.k141_670120                            6853 1 +     27826 T
i Semnopithecus_johnii.k141_670120                       I 2 C 0
s Semnopithecus_priam.k141_638794                             6374 1 -     19483 T
i Semnopithecus_priam.k141_638794                        I 2 C 0
s Semnopithecus_schistaceus.k141_1584426                      6442 1 +      7198 T
i Semnopithecus_schistaceus.k141_1584426                 I 2 C 0
s Semnopithecus_vetulus.k141_1200928                         14700 1 +     15514 T
i Semnopithecus_vetulus.k141_1200928                     I 2 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11507 1 -     12148 T
i Sigmodon_hispidus.SigHis_scaffold_60841                I 71 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               3258 1 +   1910179 C
i Solenodon_paradoxus.SolPar_flattened_line_126          I 1 C 0
s Sorex_araneus.JH798187.1                                13650505 1 -  18376816 t
i Sorex_araneus.JH798187.1                               I 3 C 0
s Spermophilus_dauricus.KZ294078.1                         1952742 1 -   3870691 T
i Spermophilus_dauricus.KZ294078.1                       I 42 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30194 1 +     97271 T
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 3 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              17778 1 -    196729 T
i Suricata_suricatta.SurSur_flattened_line_6629          I 3 C 0
s Sus_scrofa.CM000828.4                                    6809951 1 +  69701581 c
i Sus_scrofa.CM000828.4                                  I 2 C 0
s Symphalangus_syndactylus.tarseq_199                      1092916 1 -   1523678 G
i Symphalangus_syndactylus.tarseq_199                    I 2 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 71587 1 +    116680 C
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 3 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118211 1 -    156842 T
i Tapirus_indicus.TapInd_scaffold_9301                   I 3 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    386664 1 +    539355 T
i Tapirus_terrestris.TapTer_scaffold_755                 I 3 C 0
s Tarsius_lariang.k141_2201908                               25915 1 +     70052 T
i Tarsius_lariang.k141_2201908                           I 4 C 0
s Tarsius_wallacei.k141_254427                                 748 1 -     16117 T
i Tarsius_wallacei.k141_254427                           I 4 C 0
s Theropithecus_gelada.CM009954.1                        186428031 1 + 186847797 t
i Theropithecus_gelada.CM009954.1                        I 2 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   5439 1 +      8208 T
i Tolypeutes_matacus.TolMat_scaffold_228639              I 3 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     80394 1 +    610378 T
i Tonatia_saurophila.TonSau_scaffold_294                 I 3 C 0
s Trachypithecus_auratus.k141_722599                         10425 1 -     20410 T
i Trachypithecus_auratus.k141_722599                     I 2 C 0
s Trachypithecus_crepusculus.k141_1194022                    14619 1 +     15221 T
i Trachypithecus_crepusculus.k141_1194022                I 2 C 0
s Trachypithecus_cristatus.k141_580354                       10526 1 +     19930 T
i Trachypithecus_cristatus.k141_580354                   I 2 C 0
s Trachypithecus_francoisi.k141_1412647                       6953 1 -     19997 T
i Trachypithecus_francoisi.k141_1412647                  I 2 C 0
s Trachypithecus_geei.k141_277701                            47077 1 -     60166 T
i Trachypithecus_geei.k141_277701                        I 2 C 0
s Trachypithecus_germaini.k141_912491                        14548 1 -     27529 T
i Trachypithecus_germaini.k141_912491                    I 2 C 0
s Trachypithecus_hatinhensis.k141_143409                     14492 1 -     18194 T
i Trachypithecus_hatinhensis.k141_143409                 I 2 C 0
s Trachypithecus_laotum.k141_907409                           8220 1 -     21137 T
i Trachypithecus_laotum.k141_907409                      I 2 C 0
s Trachypithecus_leucocephalus.k141_587342                    6923 1 -     10723 T
i Trachypithecus_leucocephalus.k141_587342               I 2 C 0
s Trachypithecus_melamera.k141_434728                         6079 1 +      9834 T
i Trachypithecus_melamera.k141_434728                    I 2 C 0
s Trachypithecus_obscurus.k141_190785                        24392 1 +     32220 T
i Trachypithecus_obscurus.k141_190785                    I 2 C 0
s Trachypithecus_phayrei.ctg124                            5938494 1 +   6242583 T
i Trachypithecus_phayrei.ctg124                          I 2 C 0
s Trachypithecus_pileatus.k141_2007326                        7746 1 +     20839 T
i Trachypithecus_pileatus.k141_2007326                   I 2 C 0
s Tupaia_chinensis.KB320699.1                              2155139 1 +   4065304 t
i Tupaia_chinensis.KB320699.1                            I 2 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     8787 1 -     10553 T
i Tupaia_tana.TupTan_flattened_line_97126                I 2 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   52787 1 -     77625 T
i Uropsilus_gracilis.UroGra_scaffold_12083               I 3 C 0
s Ursus_maritimus.KK499267.1                               4849898 1 -   5085361 t
i Ursus_maritimus.KK499267.1                             I 3 C 0
s Varecia_rubra.k141_590885                                  10980 1 +     50397 T
i Varecia_rubra.k141_590885                              I 2 C 0
s Varecia_variegata.k141_1128296                             11039 1 +     24756 T
i Varecia_variegata.k141_1128296                         I 2 C 0
s Vicugna_pacos.KN270157.1                                 5371326 1 -   5488506 t
i Vicugna_pacos.KN270157.1                               I 3 C 0
s Xerus_inauris.XerIna_scaffold_48378                        23940 1 -     24430 T
i Xerus_inauris.XerIna_scaffold_48378                    I 48 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          4619 1 +     86975 T
i Zalophus_californianus.ZalCal_flattened_line_17732     I 3 C 0
e Echinops_telfairi.JH980293.1                            48779880 2 + 111700974 I
e Sapajus_macrocephalus.k141_351809                          55203 0 -     80660 C
e Sapajus_apella.ctg103                                    5420162 0 -   5703754 C
e Saimiri_ustus.k141_1484609                                 22834 0 -     61129 C
e Saimiri_sciureus.k141_2278166                               2572 0 -     23631 C
e Saimiri_oerstedii.k141_1487881                             39566 0 -     64574 C
e Saimiri_macrodon.k141_716185                               22938 0 +     45824 C
e Saimiri_cassiquiarensis.k141_2188234                       22843 0 +     46362 C
e Saimiri_boliviensis.NW_024100920.1                     119950387 0 - 121099817 C
e Saguinus_mystax.k141_374627                                 7466 0 -      9399 C
e Saguinus_midas.LG03                                    209468757 0 + 209938924 C
e Saguinus_labiatus.k141_285685                               7908 0 +      8564 C
e Saguinus_inustus.k141_699149                               13039 0 +     13640 C
e Saguinus_imperator.k141_2524406                             1625 0 +      2197 C
e Saguinus_bicolor.k141_2619299                               7665 0 -      8359 C
e Mico_schneideri.k141_1950671                                      5272 0 -      7356 C
e Mico_humeralifer.k141_1976199                               4333 0 +     18990 C
e Mico_argentatus.k141_1239457                                5260 0 -      7380 C
e Leontopithecus_rosalia.k141_464620                         25192 0 +     66356 C
e Leontopithecus_chrysomelas.k141_1519602                    28495 0 +     38576 C
e Leontocebus_nigricollis.k141_4610752                        7027 0 +     35603 C
e Leontocebus_illigeri.k141_3350179                           4309 0 +      4941 C
e Leontocebus_fuscicollis.k141_1820339                        6985 0 +     64341 C
e Chiropotes_albinasus.k141_2813271                          10603 0 +     11226 C
e Cebus_unicolor.k141_544048                                 49404 0 -     74725 C
e Cebus_olivaceus.k141_398305                                 1071 0 +      1777 C
e Cebus_albifrons.Contig27                                25651495 0 +  26074798 C
e Cebuella_pygmaea.k141_1309012                               5443 0 -      7577 C
e Cebuella_niveiventris.k141_1251222                          9345 0 -     11392 C
e Callithrix_kuhlii.k119_1164682                             11431 0 -     12001 C
e Callithrix_jacchus.pat_scaffold_3                       23589900 0 - 189096842 C
e Callithrix_geoffroyi.k119_512088                            4686 0 +      5267 C
e Callimico_goeldii.k141_1091182                             24194 0 +     31915 C
e Callibella_humilis.k141_1278103                             4720 0 -     10423 C
e Aotus_vociferans.k141_344750                               28112 0 -     47192 C
e Aotus_trivirgatus.k141_2152450                             14988 0 -     34685 C
e Aotus_nancymaae.KZ198451.1                               4297383 0 -   5030052 C
e Aotus_griseimembra.k141_2240599                            14986 0 -     34016 C
e Aotus_azarae.k141_3104676                                  14966 0 -     33861 C
e Alouatta_seniculus.k141_117119                             14345 0 +     50774 C
e Alouatta_puruensis.k141_1253230                             3121 0 -      3544 C
e Alouatta_palliata.k141_2135620                              3021 0 +     47717 C
e Alouatta_nigerrima.k141_3472759                            17622 0 -     18578 C
e Alouatta_macconnelli.k141_918386                              51 0 -      9457 C
e Alouatta_juara.k141_1509701                                24326 0 +     25266 C
e Alouatta_discolor.k141_743489                               3116 0 -     45847 C
e Alouatta_caraya.k141_1743867                                2988 0 +      3134 C
e Alouatta_belzebul.k141_3238538                              2857 0 -     27731 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      14468 48 +     63895 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 10250 3 -     43706 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292715 2 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937 0 +    114563 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                10012 0 +     41958 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Psammomys_obesus.NESX01036370.1                             9913 75 -     21651 I
e Procavia_capensis.ProCapCap_scaffold_85530                 12801 2 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813 0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       461805 3 -    559221 I
e Orycteropus_afer.OryAfe_flattened_line_144387               9301 2 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Nyctereutes_procyonoides.CAJHUB010000658.1               9148837 3 -   9404916 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    21608 2 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Meriones_unguiculatus.MerUng_scaffold_7390                 32277 72 +    140813 I
e Manis_pentadactyla.KN006162.1                              50341 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352 0 +    737560 C
e Lycaon_pictus.CM007581.1                                17954583 3 -  59628241 I
e Loxodonta_africana.GL010049.1                            4216785 2 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547 0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                 346 2 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20660051 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Elephantulus_edwardii.JH947257.1                         1097177 2 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084 0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Crocidura_indochinensis.CroInd_scaffold_37019               2459 3 -     19598 I
e Colobus_guereza.LG01                                   199948958 0 + 200372422 C
e Chinchilla_lanigera.JH722012.1                           1251498 0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157 0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    136758 0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18499855 3 +  63665305 I
e Canis_lupus_familiaris.chr16                            17958343 3 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9034078 3 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    184692 3 -    185531 I
e CanFam4.chr16                                           17798635 3 -  60362399 I
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74162 41 -     89534 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       6212 1 +     62944 T
s Acinonyx_jubatus.LLWD01001279.1                           826791 1 -   1699592 t
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     70410 1 +     87051 C
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 423 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510039 1 -  29979442 t
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             78809 1 -    347723 t
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14143 1 -     52922 T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         14079 1 -     28001 T
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          4575 1 -     18505 T
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           5428 1 -     12518 T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184540 1 +    412891 T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      11422 1 +     20879 C
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       10865 1 +     14667 T
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3947 1 +     43469 T
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  53258 1 -     92717 T
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              53885 1 +     85213 T
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Camelus_bactrianus.KN276810.1                           10001825 1 -  17673402 t
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334283 1 -   7040546 t
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  402566 1 -   1652518 t
i Camelus_ferus.KB017975.1                               C 0 C 0
s Carlito_syrichta.NW_007247396.1                           200897 1 +    308752 t
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                4310 1 -     11696 T
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     92469 1 +    217609 G
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         4904 1 +     31688 T
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12230885 1 +  27778364 T
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1912 1 -     25243 T
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4475092 1 +   4669795 t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        13637 1 -     19203 T
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3342297                            253 1 -     14043 T
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           8289 1 +     27781 T
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         8450 1 -     20310 T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          11429 1 +     29689 T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            6187 1 -     20078 T
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          14108 1 -     27936 T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            2974 1 -     17152 T
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38816509 1 +  39242232 T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222203 1 -  21565898 T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       39321 1 -     53127 T
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        6589 1 +      7159 T
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14124 1 -     27947 T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         14097 1 +     17596 T
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                           146 1 +     14005 T
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_713168            1908 1 -      2554 T
i Chaetophractus_vellerosus.ChaVel_scaffold_713168       C 0 C 0
s Cheirogaleus_major.k141_333249                             20637 1 -     52598 T
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16002 1 +     57038 T
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chlorocebus_aethiops.ctg25                              18428079 1 -  18827391 T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       14516 1 -     50209 T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135421516 1 + 135778131 t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 17327 1 +     19366 T
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            172424 1 +    839153 t
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1910025 1 +   2368649 t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_polykomos.k141_906115                              36563 1 +     84244 T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17547559 1 -  53390261 t
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          13773 1 -     20389 t
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 49672 1 +     63868 C
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11667167 1 + 224834208 C
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               2462 1 -     19598 T
i Crocidura_indochinensis.CroInd_scaffold_37019          I 3 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27945 1 -     87169 G
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    836670 1 +   1526836 C
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            62522 1 +   2246927 a
i Dasypus_novemcinctus.JH564415.1                        C 0 I 55
s Daubentonia_madagascariensis.ctg71                      12536862 1 -  12879189 T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8629324 1 +  20541912 t
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672736 1 +   1390856 T
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    5488 1 +    198055 T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE759718.1                                   9984 1 +     11740 t
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          19917 1 -    110024 C
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01109367.1                            6005 1 -      6299 C
i Ellobius_talpinus.LOJH01109367.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16328777 1 -  41312741 t
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144908 1 -  14770903 t
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1282800 1 +   4378816 t
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18530621 1 -  39960074 t
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               32636 1 +    498745 t
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21204687 1 -  21539334 T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13362 1 -     14127 T
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6062 1 -     16928 T
i Eulemur_collaris.k141_377015                           C 0 I 1
s Eulemur_coronatus.k141_885031                              15089 1 -     25546 T
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12298 1 +     26330 T
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 13526 1 +     23973 T
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12295 1 +     75513 T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10221 1 +     97555 T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            13152 1 +     26496 T
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  3762 1 -     17153 T
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13337 1 +    111500 T
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20236442 1 + 206538554 t
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195285 1 + 205367284 t
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  8799 1 -     36744 T
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     425818 1 -    453645 T
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             3525 1 +     11339 T
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                             828 1 +     41679 T
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840                701 1 -      9135 T
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              15467 1 -     32273 C
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186337613 1 + 186649187 t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6408 1 -     19426 T
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             11557 1 -     15286 T
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13196 1 +     18253 T
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13297 1 -     41752 T
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13134 1 -     16460 T
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               241780 1 +    327341 G
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hoolock_leuconedys.ctg274                                    434282 1 +    630532 T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  43940 1 +     55795 G
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_232023                                2048 1 -     12752 T
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                               2092 1 +     14092 T
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189542875 1 - 191637585 T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3335770 1 -  11177569 T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7519558 1 -   7955117 T
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   22079 1 +     31101 T
i Indri_indri.k141_3655594                               C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    13316 1 -     42476 T
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15523643 1 -  30322482 T
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         10536 1 -     23766 T
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             28598 1 +     45836 T
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1137 1 +     25010 T
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      26534 1 +     54090 T
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3042305 1 +   3914936 c
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     5713 1 -     14121 T
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1436639 1 +   1826925 T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5199 1 +     11245 T
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004049 1 +   6120653 T
i Loris_tardigradus.ctg83                                C 0 C 0
s Macaca_arctoides.k141_2326796                               6449 1 +     40492 T
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59675708 1 +  60120075 T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 12221 1 -     26193 T
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            80005 1 -    114318 T
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  5696 1 -     23192 T
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                15165 1 -     29190 T
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  23730 1 +     37952 T
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186838819 1 + 187317192 t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25457382 1 -  25927173 t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  79578 1 +     89720 T
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 6579 1 +     20474 T
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   6379 1 -     14993 T
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  329245 1 -    668171 T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 4695 1 -     24072 T
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               25317 1 -     45290 T
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90081 1 +     94391 T
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23936912 1 -  24302211 T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               351041 1 +    752769 T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33101870 1 -  40650429 T
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         9789 1 -    207569 T
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              9494 1 +     13704 T
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 32349 1 +    140813 C
i Meriones_unguiculatus.MerUng_scaffold_7390             I 72 C 0
s Mesocricetus_auratus.KB708134.1                         12181845 1 -  29670104 C
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Microcebus_murinus.CM007674.1                           18291059 1 -  93316391 t
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                14865 1 -     19307 T
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850101 1 +   8254450 t
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             33778 1 +     64694 T
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           8634 1 -     28506 T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         5173 1 -      8324 C
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      8603 1 -     37649 T
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140809 1 -    366855 T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   34893 1 +     37127 G
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5972 1 +     14753 T
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84360965 1 - 120012414 C
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87649963 1 - 129401213 C
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31354619 1 -  89631738 C
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90752024 1 - 130317789 C
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               300678 1 -  14710649 t
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                279145 1 -  10118263 c
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1586838 1 -   6019432 c
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902910 1 -   4330536 c
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              188228 1 +    196477 T
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2033452 1 -   3037898 C
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               14621 1 +     21681 T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306427 1 +  31847680 c
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nycticebus_bengalensis.LG01                            102579028 1 - 196305487 T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_771082                               873 1 -      2667 T
i Nycticebus_coucang.k141_771082                         C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749449 1 + 199412804 T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1362863 1 +   3988456 t
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              506112 1 -   2017862 t
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   24754 1 +     28053 C
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    79756 1 +    102263 C
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67146542 1 + 174332312 t
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         3350 1 +      8798 T
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             695514 1 -   1103335 t
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    43560 1 +     80009 t
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189142469 1 + 189151597 t
i Pan_troglodytes.CM009242.2                             C 0 I 6
s Panthera_onca.PanOnc_flattened_line_3271                  150644 1 +    230217 T
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                263850 1 +  18783137 T
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4720488 1 -   8748460 T
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183442662 1 + 183742232 t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             6360 1 +     20448 T
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563168 1 +  20919399 T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   5104 1 +     41871 T
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     8389 1 +     27711 T
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  8470 1 +      9205 T
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12112 1 -     78924 T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            9495 1 +     13100 T
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             7897 1 +     25941 T
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18194375 1 -  18517816 C
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Piliocolobus_badius.k141_1234363                           43123 1 +     62158 T
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        37854 1 +     89929 T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            39270 1 +     51399 T
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14295508 1 -  14605196 t
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1302 1 +     22620 T
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189130602 1 + 189387572 t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570210 1 +   9816681 T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               72792 1 -     81375 T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              4612 1 +     19060 T
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2596321 1 -   4620579 t
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990304 1 +   2598838 t
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          28614 1 +     38485 T
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                               657 1 -     13098 T
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26135 1 +     35766 T
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4322 1 -     24134 T
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28147 1 -     67325 T
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4370 1 -      6182 T
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             9988 1 -     21651 C
i Psammomys_obesus.NESX01036370.1                        I 75 C 0
s Pteronotus_parnellii.KE909381.1                            14151 1 -     21811 t
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39694 1 +     42204 T
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22976241 1 +  28871421 t
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1359327 1 +   4952924 t
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20273798 1 -  38429054 t
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             14621 1 -     91421 T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7608744 1 +   7812017 T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             14593 1 -     72585 T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53570236 1 +  90668790 C
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             6308 1 -     11128 T
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91235663 1 - 195417433 t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7671313 1 +   7961872 T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87262 1 -     96226 T
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    152627 1 -    313613 T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          19132 1 -     19888 T
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26335 1 +     39453 T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            6854 1 +     27826 T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             6375 1 -     19483 T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      6443 1 +      7198 T
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         14701 1 +     15514 T
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11508 1 -     12148 C
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               3259 1 +   1910179 T
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13650506 1 -  18376816 t
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1952743 1 -   3870691 T
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30195 1 +     97271 T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              17779 1 -    196729 G
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6809952 1 +  69701581 a
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1092917 1 -   1523678 T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 71588 1 +    116680 T
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118212 1 -    156842 T
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    386665 1 +    539355 T
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               25916 1 +     70052 T
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                 749 1 -     16117 T
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428032 1 + 186847797 t
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   5440 1 +      8208 T
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     80395 1 +    610378 T
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         10426 1 -     20410 T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    14620 1 +     15221 T
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                       10527 1 +     19930 T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       6954 1 -     19997 T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            47078 1 -     60166 T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        14549 1 -     27529 T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     14493 1 -     18194 T
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           8221 1 -     21137 T
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    6924 1 -     10723 T
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         6080 1 +      9834 T
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        24393 1 +     32220 T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5938495 1 +   6242583 T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        7747 1 +     20839 T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2155140 1 +   4065304 t
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     8788 1 -     10553 T
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   52788 1 -     77625 T
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4849899 1 -   5085361 t
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  10981 1 +     50397 T
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11040 1 +     24756 T
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371327 1 -   5488506 t
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        23941 1 -     24430 C
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          4620 1 +     86975 T
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Echinops_telfairi.JH980293.1                            48779880 2 + 111700974 I
e Sapajus_macrocephalus.k141_351809                          55203 0 -     80660 C
e Sapajus_apella.ctg103                                    5420162 0 -   5703754 C
e Saimiri_ustus.k141_1484609                                 22834 0 -     61129 C
e Saimiri_sciureus.k141_2278166                               2572 0 -     23631 C
e Saimiri_oerstedii.k141_1487881                             39566 0 -     64574 C
e Saimiri_macrodon.k141_716185                               22938 0 +     45824 C
e Saimiri_cassiquiarensis.k141_2188234                       22843 0 +     46362 C
e Saimiri_boliviensis.NW_024100920.1                     119950387 0 - 121099817 C
e Saguinus_mystax.k141_374627                                 7466 0 -      9399 C
e Saguinus_midas.LG03                                    209468757 0 + 209938924 C
e Saguinus_labiatus.k141_285685                               7908 0 +      8564 C
e Saguinus_inustus.k141_699149                               13039 0 +     13640 C
e Saguinus_imperator.k141_2524406                             1625 0 +      2197 C
e Saguinus_bicolor.k141_2619299                               7665 0 -      8359 C
e Mico_schneideri.k141_1950671                                      5272 0 -      7356 C
e Mico_humeralifer.k141_1976199                               4333 0 +     18990 C
e Mico_argentatus.k141_1239457                                5260 0 -      7380 C
e Leontopithecus_rosalia.k141_464620                         25192 0 +     66356 C
e Leontopithecus_chrysomelas.k141_1519602                    28495 0 +     38576 C
e Leontocebus_nigricollis.k141_4610752                        7027 0 +     35603 C
e Leontocebus_illigeri.k141_3350179                           4309 0 +      4941 C
e Leontocebus_fuscicollis.k141_1820339                        6985 0 +     64341 C
e Chiropotes_albinasus.k141_2813271                          10603 0 +     11226 C
e Cebus_unicolor.k141_544048                                 49404 0 -     74725 C
e Cebus_olivaceus.k141_398305                                 1071 0 +      1777 C
e Cebus_albifrons.Contig27                                25651495 0 +  26074798 C
e Cebuella_pygmaea.k141_1309012                               5443 0 -      7577 C
e Cebuella_niveiventris.k141_1251222                          9345 0 -     11392 C
e Callithrix_kuhlii.k119_1164682                             11431 0 -     12001 C
e Callithrix_jacchus.pat_scaffold_3                       23589900 0 - 189096842 C
e Callithrix_geoffroyi.k119_512088                            4686 0 +      5267 C
e Callimico_goeldii.k141_1091182                             24194 0 +     31915 C
e Callibella_humilis.k141_1278103                             4720 0 -     10423 C
e Aotus_vociferans.k141_344750                               28112 0 -     47192 C
e Aotus_trivirgatus.k141_2152450                             14988 0 -     34685 C
e Aotus_nancymaae.KZ198451.1                               4297383 0 -   5030052 C
e Aotus_griseimembra.k141_2240599                            14986 0 -     34016 C
e Aotus_azarae.k141_3104676                                  14966 0 -     33861 C
e Alouatta_seniculus.k141_117119                             14345 0 +     50774 C
e Alouatta_puruensis.k141_1253230                             3121 0 -      3544 C
e Alouatta_palliata.k141_2135620                              3021 0 +     47717 C
e Alouatta_nigerrima.k141_3472759                            17622 0 -     18578 C
e Alouatta_macconnelli.k141_918386                              51 0 -      9457 C
e Alouatta_juara.k141_1509701                                24326 0 +     25266 C
e Alouatta_discolor.k141_743489                               3116 0 -     45847 C
e Alouatta_caraya.k141_1743867                                2988 0 +      3134 C
e Alouatta_belzebul.k141_3238538                              2857 0 -     27731 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      14468 48 +     63895 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 10250 3 -     43706 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4292715 2 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937 0 +    114563 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                10012 0 +     41958 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Procavia_capensis.ProCapCap_scaffold_85530                 12801 2 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813 0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       461805 3 -    559221 I
e Orycteropus_afer.OryAfe_flattened_line_144387               9301 2 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Nyctereutes_procyonoides.CAJHUB010000658.1               9148837 3 -   9404916 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    21608 2 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50341 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352 0 +    737560 C
e Lycaon_pictus.CM007581.1                                17954583 3 -  59628241 I
e Loxodonta_africana.GL010049.1                            4216785 2 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547 0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                 346 2 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20660051 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Elephantulus_edwardii.JH947257.1                         1097177 2 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084 0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Colobus_guereza.LG01                                   199948958 0 + 200372422 C
e Chinchilla_lanigera.JH722012.1                           1251498 0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157 0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    136758 0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18499855 3 +  63665305 I
e Canis_lupus_familiaris.chr16                            17958343 3 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9034078 3 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    184692 3 -    185531 I
e CanFam4.chr16                                           17798635 3 -  60362399 I
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74162 41 -     89534 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       6213 7 +     62944 TTACT--TT
s Acinonyx_jubatus.LLWD01001279.1                           826792 6 -   1699592 t-act--tt
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     70411 3 +     87051 T-GT-----
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510040 6 -  29979442 t-act--TT
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             78810 6 -    347723 t-act--tT
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     74203 2 -     89534 --GT-----
i Allactaga_bullata.AllBul_scaffold_9566                 I 41 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14144 7 -     52922 TTACT--TT
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         14080 7 -     28001 TTACT--TT
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          4576 7 -     18505 TTACT--TT
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           5429 7 -     12518 TTACT--TT
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                              2857 4 -     27731 ---TT--TT
i Alouatta_belzebul.k141_3238538                         C 0 I 6
s Alouatta_caraya.k141_1743867                                2988 4 +      3134 ---TT--TT
i Alouatta_caraya.k141_1743867                           C 0 I 6
s Alouatta_discolor.k141_743489                               3116 4 -     45847 ---TT--TT
i Alouatta_discolor.k141_743489                          C 0 I 6
s Alouatta_juara.k141_1509701                                24326 4 +     25266 ---TT--TT
i Alouatta_juara.k141_1509701                            C 0 I 6
s Alouatta_macconnelli.k141_918386                              51 4 -      9457 ---TT--TT
i Alouatta_macconnelli.k141_918386                       C 0 I 6
s Alouatta_nigerrima.k141_3472759                            17622 4 -     18578 ---TT--TT
i Alouatta_nigerrima.k141_3472759                        C 0 I 6
s Alouatta_palliata.k141_2135620                              3021 4 +     47717 ---TT--TT
i Alouatta_palliata.k141_2135620                         C 0 I 6
s Alouatta_puruensis.k141_1253230                             3121 4 -      3544 ---TT--TT
i Alouatta_puruensis.k141_1253230                        C 0 I 6
s Alouatta_seniculus.k141_117119                             14345 4 +     50774 ---TT--TT
i Alouatta_seniculus.k141_117119                         C 0 I 6
s Anoura_caudifer.AnoCau_scaffold_1412                      184541 6 +    412891 T-ACT--TT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  14966 4 -     33861 ---TT--TT
i Aotus_azarae.k141_3104676                              C 0 I 6
s Aotus_griseimembra.k141_2240599                            14986 4 -     34016 ---TT--TT
i Aotus_griseimembra.k141_2240599                        C 0 I 6
s Aotus_nancymaae.KZ198451.1                               4297383 4 -   5030052 ---tt--tt
i Aotus_nancymaae.KZ198451.1                             C 0 I 6
s Aotus_trivirgatus.k141_2152450                             14988 4 -     34685 ---TT--TT
i Aotus_trivirgatus.k141_2152450                         C 0 I 6
s Aotus_vociferans.k141_344750                               28112 4 -     47192 ---TT--TT
i Aotus_vociferans.k141_344750                           C 0 I 6
s Aplodontia_rufa.AprRuf_scaffold_68852                      11423 3 +     20879 T-GC-----
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       10866 7 +     14667 TTACT--TT
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3948 6 +     43469 T-ACT--TT
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  53259 7 -     92717 TTACT--TT
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              53886 7 +     85213 TTACT--TT
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             4720 4 -     10423 ---TT--TT
i Callibella_humilis.k141_1278103                        C 0 I 6
s Callimico_goeldii.k141_1091182                             24194 4 +     31915 ---TT--TT
i Callimico_goeldii.k141_1091182                         C 0 I 6
s Callithrix_geoffroyi.k119_512088                            4686 4 +      5267 ---TT--TT
i Callithrix_geoffroyi.k119_512088                       C 0 I 6
s Callithrix_jacchus.pat_scaffold_3                       23589900 4 - 189096842 ---TT--TT
i Callithrix_jacchus.pat_scaffold_3                      C 0 I 6
s Callithrix_kuhlii.k119_1164682                             11431 4 -     12001 ---TT--TT
i Callithrix_kuhlii.k119_1164682                         C 0 I 6
s Camelus_bactrianus.KN276810.1                           10001826 6 -  17673402 t-act--tt
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334284 6 -   7040546 t-act--tt
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  402567 6 -   1652518 t-act--tt
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17798638 3 -  60362399 ----T--TT
i CanFam4.chr16                                          I 3 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184695 3 -    185531 ----T--TT
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 3 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034081 3 -   9314153 ----t--tt
i Canis_lupus_dingo.QKWQ01000480.1                       I 3 C 0
s Canis_lupus_familiaris.chr16                            17958346 3 -  59632846 ----t--tt
i Canis_lupus_familiaris.chr16                           I 3 C 0
s Canis_lupus_orion.HG994398.1                            18499858 3 +  63665305 ----t--tt
i Canis_lupus_orion.HG994398.1                           I 3 C 0
s Carlito_syrichta.NW_007247396.1                           200898 7 +    308752 ttact--tt
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                4311 6 -     11696 C-TCT--TT
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     92470 6 +    217609 T-ACT--TT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          9345 4 -     11392 ---TT--TT
i Cebuella_niveiventris.k141_1251222                     C 0 I 6
s Cebuella_pygmaea.k141_1309012                               5443 4 -      7577 ---TT--TT
i Cebuella_pygmaea.k141_1309012                          C 0 I 6
s Cebus_albifrons.Contig27                                25651495 4 +  26074798 ---TT--TT
i Cebus_albifrons.Contig27                               C 0 I 2
s Cebus_olivaceus.k141_398305                                 1071 4 +      1777 ---TT--TT
i Cebus_olivaceus.k141_398305                            C 0 I 3
s Cebus_unicolor.k141_544048                                 49404 4 -     74725 ---TT--TT
i Cebus_unicolor.k141_544048                             C 0 I 5
s Cephalopachus_bancanus.k141_1423433                         4905 7 +     31688 TTACT--TT
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12230886 6 +  27778364 T-ACT--TT
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1913 6 -     25243 T-ACT--TT
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4475093 7 +   4669795 ttact--tt
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        13638 7 -     19203 TTACT--TT
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3342297                            254 7 -     14043 TTACT--TT
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           8290 7 +     27781 TTACT--TT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         8451 7 -     20310 TTACT--TT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          11430 7 +     29689 TTACT--TT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            6188 7 -     20078 TTACT--TT
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          14109 7 -     27936 TTACT--TT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            2975 7 -     17152 TTACT--TT
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38816510 7 +  39242232 TTACT--TT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222204 7 -  21565898 TTACT--TT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       39322 7 -     53127 TTACT--TT
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        6590 7 +      7159 TTACT--TT
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14125 7 -     27947 TTACT--TT
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         14098 7 +     17596 TTACT--TT
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                           147 7 +     14005 TTACT--TT
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_713168            1909 6 -      2554 C-ACT--GT
i Chaetophractus_vellerosus.ChaVel_scaffold_713168       C 0 C 0
s Cheirogaleus_major.k141_333249                             20638 7 -     52598 TTACT--TT
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16003 7 +     57038 TTACT--TT
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                          10603 4 +     11226 ---TT--TT
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18428080 7 -  18827391 TTACT--TT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       14517 7 -     50209 TTACT--TT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135421517 7 + 135778131 ttact--tt
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 17328 6 +     19366 T-ACT--TT
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            172425 6 +    839153 t-act--tt
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1910026 7 +   2368649 ttact--tt
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_polykomos.k141_906115                              36564 7 +     84244 TTACT--TT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17547560 6 -  53390261 t-tat--tt
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          13774 6 -     20389 t-act--tt
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 100
s Cricetomys_gambianus.CriGam_scaffold_18520                 49673 3 +     63868 T-GT-----
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11667168 3 + 224834208 T-GT-----
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               2463 7 -     19598 C-GCT-GTT
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27946 6 -     87169 G-ACT--TT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    836671 3 +   1526836 T-AT-----
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            62578 6 +   2246927 c-act--gt
i Dasypus_novemcinctus.JH564415.1                        I 55 C 0
s Daubentonia_madagascariensis.ctg71                      12536863 7 -  12879189 TTACT--TT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8629325 6 +  20541912 t-act--tt
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672737 6 +   1390856 T-ACT--TT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    5489 6 +    198055 T-ACT--TT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Echinops_telfairi.JH980293.1                            48779882 2 + 111700974 ---C----T
i Echinops_telfairi.JH980293.1                           I 2 C 0
s Eidolon_helvum.KE759718.1                                   9985 6 +     11740 t-act--TT
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1097179 4 +  10337057 ---c-tT-T
i Elephantulus_edwardii.JH947257.1                       I 2 C 0
s Ellobius_lutescens.LOEQ01008920.1                          19918 3 -    110024 G-GT-----
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01109367.1                            6006 3 -      6299 T-GT-----
i Ellobius_talpinus.LOJH01109367.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16328778 6 -  41312741 t-act--TT
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144909 6 -  14770903 a-att--gt
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1282801 6 +   4378816 t-gct--tt
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18530622 6 -  39960074 t-gct--tt
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               32637 6 +    498745 t-gct--tt
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21204688 7 -  21539334 TTACT--TT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13363 7 -     14127 TTACT--TT
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6064 7 -     16928 TTACT--TT
i Eulemur_collaris.k141_377015                           I 1 C 0
s Eulemur_coronatus.k141_885031                              15090 7 -     25546 TTACT--TT
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12299 7 +     26330 TTACT--TT
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 13527 7 +     23973 TTACT--TT
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12296 7 +     75513 TTACT--TT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10222 7 +     97555 TTACT--TT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            13153 7 +     26496 TTACT--TT
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  3763 7 -     17153 TTACT--TT
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13338 7 +    111500 TTACT--TT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20236443 6 + 206538554 t-act--tt
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195286 6 + 205367284 t-act--tt
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  8800 6 -     36744 T-ACT--TT
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     425819 7 -    453645 ACACT--TT
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             3526 7 +     11339 ACACT--TT
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                             829 7 +     41679 TCACT--TT
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840                702 6 -      9135 T-ACT--TT
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              15468 7 -     32273 TTACT--TT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186337614 7 + 186649187 ttact--tt
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6409 7 -     19426 TTACT--TT
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             11558 7 -     15286 TTACT--TT
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13197 7 +     18253 TTACT--TC
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13298 7 -     41752 TTACT--TT
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13135 7 -     16460 TTACT--TT
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               241781 6 +    327341 T-ACT--TT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                 348 4 +      7595 ---CT--TC
i Heterohyrax_brucei.HetBruBak_scaffold_122365           I 2 C 0
s Hoolock_leuconedys.ctg274                                    434283 7 +    630532 TTACT--TT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  43941 6 +     55795 T-ACT--TT
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_232023                                2049 7 -     12752 TTACT--TT
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                               2093 7 +     14092 TTACT--TT
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189542876 7 - 191637585 TTACT--TT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3335771 7 -  11177569 TTACT--TT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7519559 3 -   7955117 C-GT-----
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   22080 7 +     31101 TTACT--TT
i Indri_indri.k141_3655594                               C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    13317 6 -     42476 A-ATT--GT
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15523644 7 -  30322482 TTACT--TT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        6985 4 +     64341 ---TT--TT
i Leontocebus_fuscicollis.k141_1820339                   C 0 I 4
s Leontocebus_illigeri.k141_3350179                           4309 4 +      4941 ---TT--TT
i Leontocebus_illigeri.k141_3350179                      C 0 I 4
s Leontocebus_nigricollis.k141_4610752                        7027 4 +     35603 ---TT--TT
i Leontocebus_nigricollis.k141_4610752                   C 0 I 4
s Leontopithecus_chrysomelas.k141_1519602                    28495 4 +     38576 ---TT--TT
i Leontopithecus_chrysomelas.k141_1519602                C 0 I 6
s Leontopithecus_rosalia.k141_464620                         25192 4 +     66356 ---TT--TT
i Leontopithecus_rosalia.k141_464620                     C 0 I 6
s Lepilemur_ankaranensis.k141_596936                         10537 7 -     23766 TTACT--TT
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             28599 7 +     45836 TTACT--TT
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1138 7 +     25010 TTACT--TT
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      26535 7 +     54090 TTACT--TT
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3042306 6 +   3914936 t-ACT--TT
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     5714 6 -     14121 T-TCT--TT
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1436640 7 +   1826925 TTACT--TT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5200 7 +     11245 TCACT--TT
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004050 7 +   6120653 TCACT--TT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4216787 4 -  43346337 ---cT--TT
i Loxodonta_africana.GL010049.1                          I 2 C 0
s Lycaon_pictus.CM007581.1                                17954586 3 -  59628241 ----t--tt
i Lycaon_pictus.CM007581.1                               I 3 C 0
s Macaca_arctoides.k141_2326796                               6450 7 +     40492 TTACT--TT
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59675709 7 +  60120075 TTACT--TT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 12222 7 -     26193 TTACT--TT
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            80006 7 -    114318 TTACT--TT
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  5697 7 -     23192 TTACT--TT
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                15166 7 -     29190 TTACT--TT
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  23731 7 +     37952 TTACT--TT
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186838820 7 + 187317192 ttact--tt
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25457383 7 -  25927173 ttact--tt
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  79579 7 +     89720 TTACT--TT
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 6580 7 +     20474 TTACT--TT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   6380 7 -     14993 TTACT--TT
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  329246 7 -    668171 TTACT--TT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 4696 7 -     24072 TTACT--TT
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               25318 7 -     45290 TTACT--TT
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90082 6 +     94391 T-ACT--TT
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23936913 7 -  24302211 TTACT--TT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               351042 6 +    752769 -TACT--TC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33101871 3 -  40650429 C-GT-----
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         9790 6 -    207569 T-ACT--TT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              9495 6 +     13704 T-ACT--TT
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 32350 3 +    140813 C-AT-----
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12181846 3 -  29670104 T-GT-----
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                5260 4 -      7380 ---TT--TT
i Mico_argentatus.k141_1239457                           C 0 I 6
s Mico_humeralifer.k141_1976199                               4333 4 +     18990 ---TT--TT
i Mico_humeralifer.k141_1976199                          C 0 I 6
s Mico_schneideri.k141_1950671                                      5272 4 -      7356 ---TT--TT
i Mico_schneideri.k141_1950671                                 C 0 I 6
s Microcebus_murinus.CM007674.1                           18291060 7 -  93316391 ttact--tt
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    21610 2 -    145209 ---C----T
i Microgale_talazaci.MicTal_scaffold_6613                I 2 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                14866 6 -     19307 T-ACT--TG
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850102 6 +   8254450 t-act--tt
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             33779 6 +     64694 T-ACT--TT
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           8635 7 -     28506 TTACT--TT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         5174 6 -      8324 T-ACT--TT
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      8604 7 -     37649 TTACT--TT
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140810 6 -    366855 T-ACT--TG
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   34894 6 +     37127 T-ACT--TT
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5973 6 +     14753 A-ATT--GT
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84360966 3 - 120012414 T-GT-----
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87649964 3 - 129401213 T-GT-----
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31354620 3 -  89631738 T-GC-----
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90752025 3 - 130317789 T-CT-----
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               300679 6 -  14710649 t-act--tt
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                279146 6 -  10118263 a-att--gt
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1586839 6 -   6019432 a-att--gt
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902911 6 -   4330536 a-aTT--GT
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              188229 6 +    196477 T-ACT--TT
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2033453 3 -   3037898 T-GT-----
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               14622 7 +     21681 TTACT--TT
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306428 6 +  31847680 T-ACT--TT
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9148840 3 -   9404916 ----t--tt
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 3 C 0
s Nycticebus_bengalensis.LG01                            102579029 7 - 196305487 TCACT--TT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_771082                               874 7 -      2667 TCACT--TT
i Nycticebus_coucang.k141_771082                         C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749450 7 + 199412804 TCACT--TT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1362864 6 +   3988456 c-tat--tt
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              506113 6 -   2017862 t-act--tT
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   24755 3 +     28053 T-GT-----
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    79757 3 +    102263 T-GC-----
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9303 2 -     18566 ---C----T
i Orycteropus_afer.OryAfe_flattened_line_144387          I 2 C 0
s Oryctolagus_cuniculus.CM000791.1                        67146543 6 + 174332312 t-tat--tt
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       461808 3 -    559221 ----t--tt
i Otocyon_megalotis.JAEUCK010005147.1                    I 3 C 0
s Otolemur_crassicaudatus.k141_222918                         3351 7 +      8798 TCACT--TT
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             695515 7 -   1103335 tcact--tt
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    43561 7 +     80009 ttact--tt
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.KZ622849.1                                 21760 7 +    110857 ttact--tt
i Pan_troglodytes.KZ622849.1                             I 1528 I 620
s Panthera_onca.PanOnc_flattened_line_3271                  150645 6 +    230217 T-ACT--CT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                263851 6 +  18783137 T-ACT--CT
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4720489 6 -   8748460 T-ACT--CT
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183442663 7 + 183742232 ttact--tt
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             6361 7 +     20448 TTACT--TT
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563169 7 +  20919399 TTACT--TT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   5105 7 +     41871 TTACT--TT
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     8390 7 +     27711 TTACT--TT
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  8471 7 +      9205 TTACT--TT
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12113 6 -     78924 T-ACT--TT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            9496 7 +     13100 TCACT--TT
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             7898 7 +     25941 TCACT--TT
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18194376 3 -  18517816 T-GC-----
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Piliocolobus_badius.k141_1234363                           43124 7 +     62158 TTACT--TT
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        37855 7 +     89929 TTACT--TT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            39271 7 +     51399 TTACT--TT
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14295509 7 -  14605196 ttact--tt
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1303 6 +     22620 A-ATT--GT
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189130603 7 + 189387572 ttACT--TT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570211 7 +   9816681 TTACT--TT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               72793 7 -     81375 TTACT--TT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              4613 7 +     19060 TTACT--TT
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 12803 4 -     22811 ---CT--TC
i Procavia_capensis.ProCapCap_scaffold_85530             I 2 C 0
s Prolemur_simus.MPIZ01000396.1                            2596322 7 -   4620579 ttact--tt
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990305 7 +   2598838 ttact--tt
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          28615 7 +     38485 TTACT--TT
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                               658 7 -     13098 TTACT--TT
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26136 7 +     35766 TTACT--TT
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4323 7 -     24134 TTACT--TT
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28148 7 -     67325 TTACT--TT
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4371 7 -      6182 TTACT--TT
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             9989 3 -     21651 C-AT-----
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            14152 6 -     21811 t-act--tt
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39695 6 +     42204 T-ACT--TT
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22976242 6 +  28871421 t-act--tt
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1359328 6 +   4952924 t-act--tt
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20273799 6 -  38429054 t-act--tt
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             14622 7 -     91421 TTACT--TT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7608745 4 +   7812017 T---T--TT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             14594 7 -     72585 TTACT--TT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53570237 3 +  90668790 T-GT-----
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             6309 7 -     11128 TTACT--TT
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91235664 7 - 195417433 ttact--tt
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7671314 7 +   7961872 TTACT--TT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87263 6 -     96226 T-ACT--TT
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               7665 1 -      8359 ---T-----
i Saguinus_bicolor.k141_2619299                          C 0 I 3
s Saguinus_imperator.k141_2524406                             1625 4 +      2197 ---TT--TT
i Saguinus_imperator.k141_2524406                        C 0 I 6
s Saguinus_inustus.k141_699149                               13039 4 +     13640 ---TT--TT
i Saguinus_inustus.k141_699149                           C 0 I 4
s Saguinus_labiatus.k141_285685                               7908 4 +      8564 ---TT--TT
i Saguinus_labiatus.k141_285685                          C 0 I 4
s Saguinus_midas.LG03                                    209468757 4 + 209938924 ---TT--TT
i Saguinus_midas.LG03                                    C 0 I 4
s Saguinus_mystax.k141_374627                                 7466 4 -      9399 ---TT--TT
i Saguinus_mystax.k141_374627                            C 0 I 4
s Saimiri_boliviensis.NW_024100920.1                     119950387 4 - 121099817 ---tt--tt
i Saimiri_boliviensis.NW_024100920.1                     C 0 I 6
s Saimiri_cassiquiarensis.k141_2188234                       22843 4 +     46362 ---TT--TT
i Saimiri_cassiquiarensis.k141_2188234                   C 0 I 6
s Saimiri_macrodon.k141_716185                               22938 4 +     45824 ---TT--TT
i Saimiri_macrodon.k141_716185                           C 0 I 6
s Saimiri_oerstedii.k141_1487881                             39566 4 -     64574 ---TT--TT
i Saimiri_oerstedii.k141_1487881                         C 0 I 6
s Saimiri_sciureus.k141_2278166                               2572 4 -     23631 ---TT--TT
i Saimiri_sciureus.k141_2278166                          C 0 I 6
s Saimiri_ustus.k141_1484609                                 22834 4 -     61129 ---TT--TT
i Saimiri_ustus.k141_1484609                             C 0 I 6
s Sapajus_apella.ctg103                                    5420162 4 -   5703754 ---TT--TT
i Sapajus_apella.ctg103                                  C 0 I 5
s Sapajus_macrocephalus.k141_351809                          55203 4 -     80660 ---TT--TT
i Sapajus_macrocephalus.k141_351809                      C 0 I 5
s Scalopus_aquaticus.ScaAqu_scaffold_662                    152628 6 -    313613 T-ACT--TT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 3
s Semnopithecus_entellus.k141_11662                          19133 7 -     19888 TTACT--TT
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26336 7 +     39453 TTACT--TT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            6855 7 +     27826 TTACT--TT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             6376 7 -     19483 TTACT--TT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      6444 7 +      7198 TTACT--TT
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         14702 7 +     15514 TTACT--TT
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11509 3 -     12148 T-GT-----
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               3260 6 +   1910179 G-ACT--TT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13650507 7 -  18376816 c-act-gtT
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1952744 3 -   3870691 T-GT-----
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30196 6 +     97271 T-ACT--TT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              17780 6 -    196729 T-ATT--TT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6809953 6 +  69701581 t-act--tt
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1092918 7 -   1523678 TTACT--TT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 71589 6 +    116680 T-ACT--TT
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118213 6 -    156842 T-ACT--GT
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    386666 6 +    539355 T-ACT--TT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               25917 7 +     70052 TTACT--TT
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                 750 7 -     16117 TTACT--TT
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428033 7 + 186847797 ttact--tt
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   5441 6 +      8208 T-ACT--GT
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     80396 6 +    610378 T-ACT--TT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         10427 7 -     20410 TTACT--TT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    14621 7 +     15221 TTACT--TT
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                       10528 7 +     19930 TTACT--TT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       6955 7 -     19997 TTACT--TT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            47079 7 -     60166 TTACT--TT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        14550 7 -     27529 TTACT--TT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     14494 7 -     18194 TTACT--TT
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           8222 7 -     21137 TTACT--TT
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    6925 7 -     10723 TTACT--TT
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         6081 7 +      9834 TTACT--TT
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        24394 7 +     32220 TTACT--TT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5938496 7 +   6242583 TTACT--TT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        7748 7 +     20839 TTACT--TT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4292717 4 +  10818551 ---tt--tt
i Trichechus_manatus.JH594705.1                          I 2 C 0
s Tupaia_chinensis.KB320699.1                              2155141 2 +   4065304 -------tt
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     8789 2 -     10553 -------TT
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   52789 6 -     77625 T-ACT--TT
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4849900 6 -   5085361 t-act--tT
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  10982 7 +     50397 TTACT--TT
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11041 7 +     24756 TTACT--TT
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371328 6 -   5488506 t-act--tt
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10253 3 -     43706 ----T--TT
i Vulpes_lagopus.VulLag_flattened_line_30954             I 3 C 0
s Xerus_inauris.XerIna_scaffold_48378                        23942 3 -     24430 C-AC-----
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          4621 6 +     86975 T-ACT--TT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      14516 2 +     63895 --GT-----
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 48 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937 0 +    114563 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                10012 0 +     41958 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813 0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50341 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352 0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547 0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084 0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Colobus_guereza.LG01                                   199948958 0 + 200372422 C
e Chinchilla_lanigera.JH722012.1                           1251498 0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157 0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    136758 0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6220  5 +     62944 T-TT---------A-T
s Acinonyx_jubatus.LLWD01001279.1                           826798  5 -   1699592 a-tt---------a-t
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510046  5 -  29979442 A-TC---------G-T
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             78816  5 -    347723 A-TC---------A-T
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14151  3 -     52922 A-TT------------
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         14087  3 -     28001 A-TT------------
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          4583  3 -     18505 A-TT------------
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           5436  3 -     12518 A-TT------------
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                              2867  5 -     27731 A-TT---------A-T
i Alouatta_belzebul.k141_3238538                         I 6 C 0
s Alouatta_caraya.k141_1743867                                2998  5 +      3134 A-TT---------A-T
i Alouatta_caraya.k141_1743867                           I 6 C 0
s Alouatta_discolor.k141_743489                               3126  5 -     45847 A-TT---------A-T
i Alouatta_discolor.k141_743489                          I 6 C 0
s Alouatta_juara.k141_1509701                                24336  5 +     25266 A-TT---------A-T
i Alouatta_juara.k141_1509701                            I 6 C 0
s Alouatta_macconnelli.k141_918386                              61  5 -      9457 A-TT---------A-T
i Alouatta_macconnelli.k141_918386                       I 6 C 0
s Alouatta_nigerrima.k141_3472759                            17632  5 -     18578 A-TT---------A-T
i Alouatta_nigerrima.k141_3472759                        I 6 C 0
s Alouatta_palliata.k141_2135620                              3031  5 +     47717 A-TT---------A-T
i Alouatta_palliata.k141_2135620                         I 6 C 0
s Alouatta_puruensis.k141_1253230                             3131  5 -      3544 A-TT---------A-T
i Alouatta_puruensis.k141_1253230                        I 6 C 0
s Alouatta_seniculus.k141_117119                             14355  5 +     50774 A-TT---------A-T
i Alouatta_seniculus.k141_117119                         I 6 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184547  5 +    412891 A-TC---------A-T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  14976  5 -     33861 A-TT---------A-T
i Aotus_azarae.k141_3104676                              I 6 C 0
s Aotus_griseimembra.k141_2240599                            14996  5 -     34016 A-TT---------A-T
i Aotus_griseimembra.k141_2240599                        I 6 C 0
s Aotus_nancymaae.KZ198451.1                               4297393  5 -   5030052 a-tt---------a-t
i Aotus_nancymaae.KZ198451.1                             I 6 C 0
s Aotus_trivirgatus.k141_2152450                             14998  5 -     34685 A-TT---------A-T
i Aotus_trivirgatus.k141_2152450                         I 6 C 0
s Aotus_vociferans.k141_344750                               28122  5 -     47192 A-TT---------A-T
i Aotus_vociferans.k141_344750                           I 6 C 0
s Arctocebus_calabarensis.k141_2318572                       10873  5 +     14667 A-TC---------A-T
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3954  5 +     43469 A-TC---------A-T
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  53266  5 -     92717 A-TC---------A-T
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              53893  5 +     85213 A-TC---------A-T
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             4730  5 -     10423 A-TT---------A-T
i Callibella_humilis.k141_1278103                        I 6 C 0
s Callimico_goeldii.k141_1091182                             24204  5 +     31915 A-TT---------A-T
i Callimico_goeldii.k141_1091182                         I 6 C 0
s Callithrix_geoffroyi.k119_512088                            4696  5 +      5267 A-TT---------A-T
i Callithrix_geoffroyi.k119_512088                       I 6 C 0
s Callithrix_jacchus.pat_scaffold_3                       23589910  5 - 189096842 A-TT---------A-T
i Callithrix_jacchus.pat_scaffold_3                      I 6 C 0
s Callithrix_kuhlii.k119_1164682                             11441  5 -     12001 A-TT---------A-T
i Callithrix_kuhlii.k119_1164682                         I 6 C 0
s Camelus_bactrianus.KN276810.1                           10001832  5 -  17673402 a-ca---------a-t
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334290  5 -   7040546 a-ca---------a-t
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  402573  5 -   1652518 a-ca---------a-t
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17798641  5 -  60362399 A-TC---------A-T
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184698  5 -    185531 A-TC---------A-T
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034084  5 -   9314153 a-tc---------a-t
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17958349  5 -  59632846 a-tc---------a-t
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18499861  5 +  63665305 a-tc---------a-t
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007247396.1                           200905  5 +    308752 a-cc---------a-t
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                4317  5 -     11696 A-TC---------G-T
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     92476  2 +    217609 G-T-------------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          9355  5 -     11392 A-TT---------A-T
i Cebuella_niveiventris.k141_1251222                     I 6 C 0
s Cebuella_pygmaea.k141_1309012                               5453  5 -      7577 A-TT---------A-T
i Cebuella_pygmaea.k141_1309012                          I 6 C 0
s Cebus_albifrons.Contig27                                25651501  1 +  26074798 ---------------T
i Cebus_albifrons.Contig27                               I 2 C 0
s Cebus_olivaceus.k141_1000828                                2827  2 -      2944 -------------A-T
i Cebus_olivaceus.k141_1000828                           I 96 n 3
s Cebus_unicolor.k141_544048                                 49413  2 -     74725 -------------A-T
i Cebus_unicolor.k141_544048                             I 5 C 0
s Cephalopachus_bancanus.k141_1423433                         4912  5 +     31688 G-CT---------G-T
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12230892  5 +  27778364 A-TC---------A-T
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1919  5 -     25243 A-TC---------A-T
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4475100  3 +   4669795 a-tt------------
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        13645  3 -     19203 A-TT------------
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3342297                            261  3 -     14043 A-TT------------
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           8297  3 +     27781 A-TT------------
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         8458  3 -     20310 A-TT------------
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          11437  3 +     29689 A-TT------------
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            6195  3 -     20078 A-TT------------
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          14116  3 -     27936 A-TT------------
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            2982  3 -     17152 A-TT------------
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38816517  3 +  39242232 A-TT------------
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222211  3 -  21565898 A-TT------------
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       39329  3 -     53127 A-TT------------
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        6597  3 +      7159 A-TT------------
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14132  3 -     27947 A-TT------------
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         14105  3 +     17596 A-TT------------
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                           154  3 +     14005 A-TT------------
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_713168            1915  5 -      2554 C-TC---------A-T
i Chaetophractus_vellerosus.ChaVel_scaffold_713168       C 0 C 0
s Cheirogaleus_major.k141_333249                             20645  5 -     52598 A-TC---------A-T
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16010  5 +     57038 A-TC---------A-T
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                          10607  5 +     11226 A-TT---------A-T
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18428087  3 -  18827391 A-TT------------
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       14524  3 -     50209 A-TT------------
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135421524  3 + 135778131 a-tt------------
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 17334  5 +     19366 G-TC---------A-T
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            172431  5 +    839153 g-tc---------a-T
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1910033  3 +   2368649 a-tt------------
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_polykomos.k141_906115                              36571  3 +     84244 A-TT------------
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17547566  5 -  53390261 a-tc---------a-t
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          13880  5 -     20389 a-tA---------A-T
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 100 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               2470  6 -     19598 TCTT---------A-T
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27952  5 -     87169 A-TC---------A-T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            62584  5 +   2246927 g-tc---------A-T
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12536870  5 -  12879189 A-TC---------A-T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8629331  5 +  20541912 a-tc---------a-T
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672743  5 +   1390856 A-TC---------A-T
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    5495  5 +    198055 A-TC---------A-T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Echinops_telfairi.JH980293.1                            48779884  5 + 111700974 T-TC---------C-T
i Echinops_telfairi.JH980293.1                           C 0 I 3
s Eidolon_helvum.KE759718.1                                   9991  5 +     11740 A-TA---------A-T
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1097183  5 +  10337057 A-TC---------A-T
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16328784  5 -  41312741 A-TC---------A-T
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144915  5 -  14770903 a-tt---------a-t
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1282807  5 +   4378816 a-tg---------a-T
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18530628  5 -  39960074 a-tg---------a-T
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               32643  5 +    498745 a-tg---------a-T
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21204695  3 -  21539334 A-TT------------
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13370  5 -     14127 A-TC---------A-T
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6071  5 -     16928 A-TC---------A-T
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15097  5 -     25546 A-TC---------A-T
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12306  5 +     26330 A-TC---------A-T
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 13534  5 +     23973 A-TC---------A-T
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12303  5 +     75513 A-TC---------A-T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10229  5 +     97555 A-TC---------A-T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            13160  5 +     26496 A-TC---------A-T
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  3770  5 -     17153 A-TC---------A-T
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13345  5 +    111500 A-TC---------A-T
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20236449  5 + 206538554 a-tt---------a-t
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195292  5 + 205367284 a-tt---------a-t
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  8806  5 -     36744 A-TT---------A-T
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     425826  5 -    453645 A-TC---------A-T
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             3533  5 +     11339 A-TC---------A-T
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                             836  5 +     41679 A-TC---------A-T
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840                708  5 -      9135 A-TT---------A-G
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              15475  5 -     32273 T-TT---------A-T
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186337621  5 + 186649187 t-tt---------a-t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6416  5 -     19426 A-TC---------A-T
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             11565  5 -     15286 A-TC---------A-T
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13204  5 +     18253 A-TC---------A-T
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13305  5 -     41752 A-TC---------A-T
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13142  5 -     16460 A-TC---------A-T
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               241787  5 +    327341 A-TC---------A-T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                 352  5 +      7595 A-CC---------A-T
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hoolock_leuconedys.ctg274                                    434290  5 +    630532 T-TT---------A-T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  43947  5 +     55795 A-CC---------A-T
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_232023                                2056  5 -     12752 T-TT---------A-T
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                               2100  5 +     14092 T-TT---------A-T
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189542883  5 - 191637585 T-TT---------A-T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3335778  5 -  11177569 T-TT---------A-T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_3655594                                   22087  5 +     31101 A-CC---------A-T
i Indri_indri.k141_3655594                               C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    13323 14 -     42476 A-TTATTTGTATTA-T
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15523651  5 -  30322482 A-TC---------A-T
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        6993  5 +     64341 A-TT---------A-T
i Leontocebus_fuscicollis.k141_1820339                   I 4 C 0
s Leontocebus_illigeri.k141_3350179                           4317  5 +      4941 A-TT---------A-T
i Leontocebus_illigeri.k141_3350179                      I 4 C 0
s Leontocebus_nigricollis.k141_4610752                        7035  5 +     35603 A-TT---------A-T
i Leontocebus_nigricollis.k141_4610752                   I 4 C 0
s Leontopithecus_chrysomelas.k141_1519602                    28505  5 +     38576 A-TT---------A-T
i Leontopithecus_chrysomelas.k141_1519602                I 6 C 0
s Leontopithecus_rosalia.k141_464620                         25202  5 +     66356 A-TT---------A-T
i Leontopithecus_rosalia.k141_464620                     I 6 C 0
s Lepilemur_ankaranensis.k141_596936                         10544  5 -     23766 A-TC---------A-T
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             28606  5 +     45836 A-TC---------A-T
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1145  5 +     25010 A-TC---------A-T
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      26542  5 +     54090 A-TC---------A-T
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3042312  5 +   3914936 G-TC---------A-T
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     5720  5 -     14121 A-C----------AAT
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1436647  3 +   1826925 A-TT------------
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5207  5 +     11245 A-TC---------A-T
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004057  5 +   6120653 A-TC---------A-T
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4216791  5 -  43346337 A-TC---------A-T
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17954589  5 -  59628241 a-tc---------a-t
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               6457  3 +     40492 A-TT------------
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59675716  3 +  60120075 A-TT------------
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 12229  3 -     26193 A-TT------------
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            80013  3 -    114318 A-TT------------
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  5704  3 -     23192 A-TT------------
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                15173  3 -     29190 A-TT------------
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  23738  3 +     37952 A-TT------------
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186838827  3 + 187317192 a-tt------------
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25457390  3 -  25927173 a-tt------------
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  79586  3 +     89720 A-TT------------
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 6587  3 +     20474 A-TT------------
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   6387  3 -     14993 A-TT------------
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  329253  3 -    668171 A-TT------------
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 4703  3 -     24072 A-TT------------
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               25325  3 -     45290 A-TT------------
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90088  5 +     94391 A-TA---------A-T
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23936920  3 -  24302211 A-TT------------
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               351048  3 +    752769 A-TT------------
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         9796  5 -    207569 A-CA---------A-T
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              9501  5 +     13704 A-TC---------A-T
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mico_argentatus.k141_1239457                                5270  5 -      7380 A-TT---------A-T
i Mico_argentatus.k141_1239457                           I 6 C 0
s Mico_humeralifer.k141_1976199                               4343  5 +     18990 A-TT---------A-T
i Mico_humeralifer.k141_1976199                          I 6 C 0
s Mico_schneideri.k141_1950671                                      5282  5 -      7356 A-TT---------A-T
i Mico_schneideri.k141_1950671                                 I 6 C 0
s Microcebus_murinus.CM007674.1                           18291067  5 -  93316391 a-tc---------a-t
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    21612  5 -    145209 T-TC---------C-T
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 3
s Micronycteris_hirsuta.MicHir_scaffold_52381                14872  5 -     19307 A-TC---------A-T
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850108  5 +   8254450 a-tt---------a-t
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             33785  5 +     64694 A-TT---------A-T
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           8642  3 -     28506 A-TT------------
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         5180  5 -      8324 G-TC---------A-T
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      8611  5 -     37649 A-TC---------A-T
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140816  5 -    366855 A-TC---------A-T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   34900  5 +     37127 A-TC---------A-T
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5979  5 +     14753 A-TT---------A-T
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mustela_putorius.JH418006.1                               300685  5 -  14710649 a-tt---------a-t
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                279152  5 -  10118263 a-tt---------a-t
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1586845  5 -   6019432 a-tt---------a-t
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902917  5 -   4330536 G-TT---------A-T
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              188235  5 +    196477 G-TC---------A-T
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nasalis_larvatus.k141_413338                               14629  3 +     21681 A-TT------------
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306434  5 +  31847680 G-TC---------A-T
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9148843  5 -   9404916 a-tc---------a-t
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102579036  5 - 196305487 A-TC---------A-T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_771082                               881  5 -      2667 A-TC---------A-T
i Nycticebus_coucang.k141_771082                         C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749457  5 + 199412804 A-TC---------A-T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1362870  4 +   3988456 t-t----------a-t
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              506119  5 -   2017862 G-TC---------A-T
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9305  5 -     18566 A-TC---------A-T
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67146549  5 + 174332312 a-t----------aat
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       461811  5 -    559221 a-tc---------a-t
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         3358  5 +      8798 A-TC---------A-T
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             695522  5 -   1103335 a-tC---------A-T
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    43568  5 +     80009 t-tt---------a-t
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189142476  5 + 189151597 t-tt---------a-t
i Pan_troglodytes.CM009242.2                             I 6 I 19
s Panthera_onca.PanOnc_flattened_line_3271                  150651  5 +    230217 A-TT---------A-T
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                263857  5 +  18783137 A-TT---------A-T
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4720495  5 -   8748460 A-TT---------A-T
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183442670  3 + 183742232 a-tt------------
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             6368  3 +     20448 A-TT------------
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563176  3 +  20919399 A-TT------------
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   5112  3 +     41871 A-TT------------
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     8397  3 +     27711 A-TT------------
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  8478  3 +      9205 A-TT------------
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12119  5 -     78924 A-TC---------A-T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            9503  5 +     13100 A-TC---------A-T
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             7905  5 +     25941 A-TC---------A-T
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Piliocolobus_badius.k141_1234363                           43131  3 +     62158 A-TT------------
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        37862  3 +     89929 A-TT------------
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            39278  3 +     51399 A-TT------------
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14295516  3 -  14605196 a-tt------------
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1309  5 +     22620 A-TT---------G-T
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189130610  5 + 189387572 T-TT---------A-T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570218  5 +   9816681 T-TT---------A-T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               72800  3 -     81375 A-TT------------
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              4620  3 +     19060 A-TT------------
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 12807  5 -     22811 A-CC---------A-T
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2596329  5 -   4620579 a-tc---------a-t
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990312  5 +   2598838 a-tc---------a-t
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          28622  5 +     38485 A-TC---------A-T
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                               665  5 -     13098 A-TC---------A-T
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26143  5 +     35766 A-TC---------A-T
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4330  5 -     24134 A-TC---------A-T
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28155  5 -     67325 A-TC---------A-T
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4378  5 -      6182 A-TC---------A-T
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            14158  5 -     21811 a-tc---------a-t
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39701  5 +     42204 A-TC---------A-T
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22976248  5 +  28871421 a-ta---------a-t
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1359334  5 +   4952924 a-ta---------a-t
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20273805  5 -  38429054 a-tt---------a-t
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             14629  3 -     91421 A-TT------------
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7608749  3 +   7812017 A-TT------------
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             14601  3 -     72585 A-TT------------
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             6316  3 -     11128 A-TT------------
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91235671  3 - 195417433 a-tt------------
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7671321  3 +   7961872 A-TT------------
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87269  5 -     96226 A-TA---------A-T
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               7669  5 -      8359 A-TT---------A-T
i Saguinus_bicolor.k141_2619299                          I 3 C 0
s Saguinus_imperator.k141_2524406                             1635  5 +      2197 A-TT---------A-T
i Saguinus_imperator.k141_2524406                        I 6 C 0
s Saguinus_inustus.k141_699149                               13047  5 +     13640 A-TT---------A-T
i Saguinus_inustus.k141_699149                           I 4 C 0
s Saguinus_labiatus.k141_285685                               7916  5 +      8564 A-TT---------A-T
i Saguinus_labiatus.k141_285685                          I 4 C 0
s Saguinus_midas.LG03                                    209468765  5 + 209938924 A-TT---------A-T
i Saguinus_midas.LG03                                    I 4 C 0
s Saguinus_mystax.k141_374627                                 7474  5 -      9399 A-TT---------A-T
i Saguinus_mystax.k141_374627                            I 4 C 0
s Saimiri_boliviensis.NW_024100920.1                     119950397  5 - 121099817 a-tt---------a-t
i Saimiri_boliviensis.NW_024100920.1                     I 6 C 0
s Saimiri_cassiquiarensis.k141_2188234                       22853  5 +     46362 A-TT---------A-T
i Saimiri_cassiquiarensis.k141_2188234                   I 6 C 0
s Saimiri_macrodon.k141_716185                               22948  5 +     45824 A-TT---------A-T
i Saimiri_macrodon.k141_716185                           I 6 C 0
s Saimiri_oerstedii.k141_1487881                             39576  5 -     64574 A-TT---------A-T
i Saimiri_oerstedii.k141_1487881                         I 6 C 0
s Saimiri_sciureus.k141_2278166                               2582  5 -     23631 A-TT---------A-T
i Saimiri_sciureus.k141_2278166                          I 6 C 0
s Saimiri_ustus.k141_1484609                                 22844  5 -     61129 A-TT---------A-T
i Saimiri_ustus.k141_1484609                             I 6 C 0
s Sapajus_apella.ctg103                                    5420171  2 -   5703754 -------------A-T
i Sapajus_apella.ctg103                                  I 5 C 0
s Sapajus_macrocephalus.k141_351809                          55212  2 -     80660 -------------A-T
i Sapajus_macrocephalus.k141_351809                      I 5 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    152637  2 -    313613 -------------A-T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 3 C 0
s Semnopithecus_entellus.k141_11662                          19140  3 -     19888 A-TT------------
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26343  3 +     39453 A-TT------------
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            6862  3 +     27826 A-TT------------
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             6383  3 -     19483 A-TT------------
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      6451  3 +      7198 A-TT------------
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         14709  3 +     15514 A-TT------------
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               3266  5 +   1910179 A-TC---------A-T
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13650514  5 -  18376816 A-GC---------A-T
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30202  4 +     97271 A--C---------A-T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              17786  5 -    196729 A-TC---------A-T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6809959  5 +  69701581 a-aa---------a-t
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1092925  5 -   1523678 T-TT---------A-T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 71595  5 +    116680 G-TC---------A-T
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118219  5 -    156842 A-TC---------A-T
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    386672  5 +    539355 A-TC---------A-T
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               25924  5 +     70052 A-CC---------A-T
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                 757  5 -     16117 A-CC---------A-T
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428040  3 + 186847797 a-tt------------
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   5447  5 +      8208 A-TC---------A-T
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     80402  5 +    610378 A-TC---------A-T
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         10434  3 -     20410 A-TT------------
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    14628  3 +     15221 A-TT------------
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                       10535  3 +     19930 A-TT------------
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       6962  3 -     19997 A-TT------------
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            47086  3 -     60166 A-TT------------
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        14557  3 -     27529 A-TT------------
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     14501  3 -     18194 A-TT------------
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           8229  3 -     21137 A-TT------------
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    6932  3 -     10723 A-TT------------
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         6088  3 +      9834 A-TT------------
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        24401  3 +     32220 A-TT------------
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5938503  3 +   6242583 A-TT------------
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        7755  3 +     20839 A-TT------------
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4292721  5 +  10818551 a-tc---------a-T
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2155143  5 +   4065304 a-tt---------t-c
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     8791  5 -     10553 A-TT---------T-C
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   52795  5 -     77625 A-TC---------A-T
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4849906  5 -   5085361 A-TC---------G-T
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  10989  5 +     50397 A-TC---------A-C
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11048  5 +     24756 A-TC---------A-T
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371334  5 -   5488506 t-ca---------a-t
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10256  5 -     43706 A-TC---------A-T
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          4627  5 +     86975 G-TC---------A-T
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Mus_pahari.LT608297.1                                   31354623  0 -  89631738 C
e Mus_spretus.CM004101.1                                  90752028  0 - 130317789 C
e Mus_musculus.chr8                                       87649967  0 - 129401213 C
e Mus_caroli.LT608237.1                                   84360969  0 - 120012414 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      14518  0 +     63895 C
e Xerus_inauris.XerIna_scaffold_48378                        23945  0 -     24430 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                10012  0 +     41958 C
e Spermophilus_dauricus.KZ294078.1                         1952747  0 -   3870691 C
e Sigmodon_hispidus.SigHis_scaffold_60841                    11512  0 -     12148 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570240  0 +  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Psammomys_obesus.NESX01036370.1                             9992  0 -     21651 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18194379  0 -  18517816 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    79760  0 +    102263 C
e Ondatra_zibethicus.OndZib_scaffold_46174                   24758  0 +     28053 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Nannospalax_galili.KL204047.1                            2033456  0 -   3037898 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12181849  0 -  29670104 C
e Meriones_unguiculatus.MerUng_scaffold_7390                 32353  0 +    140813 C
e Marmota_marmota.CZRN01000018.1                          33101874  0 -  40650429 C
e Manis_pentadactyla.KN006162.1                              50341  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352  0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Ictidomys_tridecemlineatus.JH393364.1                    7519562  0 -   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Ellobius_talpinus.LOJH01109367.1                            6009  0 -      6299 C
e Ellobius_lutescens.LOEQ01008920.1                          19921  0 -    110024 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    836674  0 +   1526836 C
e Cricetulus_griseus.LT883664.1                           11667171  0 + 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_18520                 49676  0 +     63868 C
e Colobus_guereza.LG01                                   199948958  0 + 200372422 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    136758  0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      11426  0 +     20879 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74205  0 -     89534 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     70414  0 +     87051 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6225 19 +     62944 GTTCTTGTC------TT-ATTA--A------------GA------------G
s Acinonyx_jubatus.LLWD01001279.1                           826803 18 -   1699592 at-CTTGCC------AT-ATTA--A------------GA------------A
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     70414  6 +     87051 --------------------AG--T------------AG------------A
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510051 19 -  29979442 TTCCCTGTC------AT-ATTA--A------------GA------------A
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             78821 15 -    347723 TTCCTTGTC------AC-ATTA------------------------------
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 3
s Allactaga_bullata.AllBul_scaffold_9566                     74205  6 -     89534 --------------------TG--T------------AG------------A
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14154 18 -     52922 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         14090 18 -     28001 -TTCTTGCC------TT-AGTA--A------------GA------------A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          4586 18 -     18505 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           5439 18 -     12518 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                              2872 19 -     27731 TTTCTTGTTT-----T--ATTA--A------------CA------------A
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                3003 19 +      3134 TTTCTTGTCT-----T--ATTA--A------------CA------------A
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               3131 19 -     45847 TTTCTCGTCT-----T--ATTA--A------------CA------------A
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                24341 19 +     25266 TTTCTTGTCT-----T--ATTA--A------------CA------------A
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_918386                              66 19 -      9457 TTTCTTGTCT-----T--ATTA--A------------CA------------A
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_3472759                            17637 19 -     18578 TTTCTTGTCT-----T--ATTA--A------------CA------------A
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              3036 19 +     47717 TTTCTTGTCT-----T--ATTA--A------------CA------------A
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             3136 19 -      3544 TTTCTTGTCT-----T--ATTA--A------------CA------------A
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             14360 19 +     50774 TTTCTTGTCT-----T--ATTA--A------------CA------------A
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184552 19 +    412891 TTCCTTGTT------CT-ATTC--A------------GA------------G
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  14981 18 -     33861 TTTCTTGTC------T--ATTA--A------------GA------------A
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            15001 18 -     34016 TTTCTTGTC------T--ATTA--A------------GA------------A
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297398 18 -   5030052 tttcttgtc------t--aTTA--A------------GA------------A
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             15003 18 -     34685 TTTCTTGTC------T--ATTA--A------------GA------------A
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28127 18 -     47192 TTTCTTGTC------T--ATTA--A------------GA------------A
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      11426  6 +     20879 --------------------GG--T------------AG------------A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       10878 19 +     14667 ACCTTTCTC------ac-atta--a------------aa------------a
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3959 19 +     43469 TTCCTTGTT------TT-ATTA--A------------GA------------G
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  53271 19 -     92717 ATCTTTGTC------AC-ATTA--A------------AA------------A
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              53898 19 +     85213 ATCTTTGTC------AC-ATTA--A------------AA------------A
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             4735 19 -     10423 TTTCCTGTC------TT-ATTA--A------------GA------------A
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             24209 19 +     31915 TTTCTTGTC------TC-ATTA--A------------GA------------A
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            4701 19 +      5267 TTTCCTGTC------TT-ATTA--A------------GA------------A
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23589915 19 - 189096842 TTTCCTGTC------TT-ATTA--A------------GA------------A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             11446 19 -     12001 TTTCCTGTC------TT-ATTA--A------------GA------------A
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10001837 19 -  17673402 TTCCTTGTC------AC-ATTA--A------------GA------------G
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334295 19 -   7040546 TTCCTTGTC------AC-ATTA--A------------GA------------G
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  402578 19 -   1652518 TTCCTTGTC------AC-ATTA--A------------GA------------G
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17798646 19 -  60362399 TTTCTTGTC------AT-ATTA--A------------GT------------A
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184703 19 -    185531 TTTCTTGTC------AT-ATTA--A------------GT------------A
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034089 19 -   9314153 tttcttgtc------AT-ATTA--A------------GT------------A
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17958354 19 -  59632846 tttcttgtc------AT-ATTA--A------------GT------------A
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18499866 19 +  63665305 tttcttgtc------AT-ATTA--A------------GT------------A
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007247396.1                           200910 19 +    308752 TTTCTTGTG------AC-ATTG--A------------GA------------A
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                4322 19 -     11696 TTCCTTGTT------CT-ATTA--A------------GA------------G
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     92478 10 +    217609 ---------------AC-TTTA--A------------AA------------A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          9360 19 -     11392 TTTCCTGTC------TT-ATTA--A------------GA------------A
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               5458 19 -      7577 TTTCCTGTC------TT-ATTA--A------------GA------------A
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25651502 19 +  26074798 TTTCTTGTC------TT-ATTA--A------------GA------------A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_398305                                 1078 19 +      1777 TTTCTTGTC------TT-ATTA--A------------GA------------A
i Cebus_olivaceus.k141_398305                            I 3 C 0
s Cebus_unicolor.k141_544048                                 49415 19 -     74725 TTTCTTGTC------TT-ATTA--A------------GA------------A
i Cebus_unicolor.k141_544048                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         4917 19 +     31688 TTTCTTGTG------AC-ATTG--A------------GA------------A
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12230897 19 +  27778364 TTCCTTGTC------GT-ATTA--A------------GA------------G
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1924 19 -     25243 TTCCTTGTC------GT-ATTA--A------------GA------------G
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4475103 18 +   4669795 -ttcttgtc------tt-agtA--A------------GA------------A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        13648 18 -     19203 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3342297                            264 18 -     14043 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           8300 18 +     27781 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         8461 18 -     20310 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          11440 18 +     29689 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            6198 18 -     20078 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          14119 18 -     27936 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            2985 18 -     17152 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38816520 18 +  39242232 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222214 18 -  21565898 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       39332 18 -     53127 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        6600 18 +      7159 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14135 18 -     27947 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         14108 18 +     17596 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                           157 18 +     14005 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_713168            1920 18 -      2554 TTCCATGCC------AC-ATC---A------------GA------------G
i Chaetophractus_vellerosus.ChaVel_scaffold_713168       C 0 C 0
s Cheirogaleus_major.k141_333249                             20650 19 -     52598 ATCTTTGTC------AC-ATTA--A------------AA------------A
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16015 19 +     57038 ATCTTTGTC------AC-ATTA--A------------AA------------A
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                          10612 19 +     11226 TTTCTTGTC------T-TATTA--A------------GA------------A
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18428090 18 -  18827391 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       14527 18 -     50209 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135421527 18 + 135778131 -ttcttgtc------tt-agtA--A------------GA------------A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 17339 18 +     19366 CTCCATGCC------AC-ATC---A------------GA------------G
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            172436 18 +    839153 CTCCATGCC------AC-ATC---A------------GG------------G
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1910036 18 +   2368649 -ttcttgtc------tt-agtA--A------------GA------------A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_polykomos.k141_906115                              36574 18 +     84244 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17547571 17 -  53390261 tccCTTG--------AC-ATTA--C------------AA------------G
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          13885 19 -     20389 TTCCTTGTC------AT-ATTA--A------------GA------------G
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 49676  6 +     63868 --------------------AG--T------------AT------------A
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11667171  6 + 224834208 --------------------AA--T------------GG------------A
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               2476 18 -     19598 -CTCTTCTC------AT-ATAA--A------------AA------------A
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27957 19 -     87169 TTCCCTGTC------AT-ATTA--A------------GA------------A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    836674  6 +   1526836 --------------------TG--T------------AG------------A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            62589 18 +   2246927 TTCCATGTC------AC-ATC---A------------GA------------G
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12536875 19 -  12879189 ATCTTTATC------AC-ATTA--A------------AA------------A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8629336 19 +  20541912 TTCCTTGTT------CT-ATTA--A------------GA------------G
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672748 19 +   1390856 TTCCTTGCC------AT-ATTA--A------------GA------------G
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    5500 19 +    198055 TTCCTTGTC------GT-ATTA--A------------GA------------G
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Echinops_telfairi.JH980293.1                            48779892 24 + 111700974 TATCATGTCTCTTG-GC-ATTA--A------------GT------------G
i Echinops_telfairi.JH980293.1                           I 3 C 0
s Eidolon_helvum.KE759718.1                                   9996 19 +     11740 ATACTAGTC------AT-ATTA--A------------GA------------G
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1097188 19 +  10337057 TCTCATGTC------AT-CTTA--A------------GA------------G
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          19921  6 -    110024 --------------------AG--T------------AG------------A
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01109367.1                            6009  6 -      6299 --------------------AG--T------------AG------------A
i Ellobius_talpinus.LOJH01109367.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16328789 19 -  41312741 TTCCTTGCC------AC-ATTA--A------------GA------------A
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144920 19 -  14770903 tttcttgtc------AT-ATTA--A------------GA------------G
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1282812 19 +   4378816 TTGCTTTTC------AT-GTTA--A------------GA------------A
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18530633 19 -  39960074 TTGCCTTTG------AT-GTTA--A------------GA------------A
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               32648 19 +    498745 TTGCCTTTG------AT-GTTA--A------------GA------------A
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21204698 17 -  21539334 -TT-TTGTC------TT-AGTA--A------------GA------------A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13375 19 -     14127 ATGTTTGTC------AC-GTTA--G------------AA------------A
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6076 19 -     16928 ATGTTTGTC------AC-ATTA--G------------AA------------A
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15102 19 -     25546 ATGTTTGTC------AT-GTTA--G------------AA------------A
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12311 19 +     26330 ATGTTTGTC------AC-ATTA--G------------AA------------A
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 13539 19 +     23973 ATGTTTGTC------AC-ATTA--G------------AA------------A
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12308 19 +     75513 ATGTTTGTC------AC-ATTA--G------------AA------------A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10234 19 +     97555 ATGTTTGTC------AC-GTTA--G------------AA------------A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            13165 19 +     26496 ATGTTTGTC------AC-GTTA--G------------AA------------A
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  3775 19 -     17153 ATGTTTGTC------AC-GTTA--G------------AA------------A
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13350 19 +    111500 ATGTTTGTC------AC-GTTA--G------------AA------------A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20236454 18 + 206538554 aT-CTTGCC------AT-ATTA--A------------GA------------A
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195297 18 + 205367284 aT-CTTGCC------AT-ATTA--A------------GA------------A
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  8811 18 -     36744 AT-CTTGCC------AT-ATTA--A------------GA------------A
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     425831 19 -    453645 ACCTTTGTC------AC-ATTa--a------------aa------------a
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             3538 19 +     11339 ACCTTTGTC------AC-ATta--a------------aa------------a
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                             841 19 +     41679 ACCTTTGTC------AC-ATTA--A------------Aa------------a
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840                713 19 -      9135 TTCCTTGTC------AC-ATTA--A------------GA------------A
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              15480 19 -     32273 GTTCTTGTC------TT-ATTA--A------------GA------------G
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186337626 19 + 186649187 gttCTTGTC------TT-ATTA--A------------GA------------G
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6421 19 -     19426 ATGTTTGTC------AC-ATTA--A------------AA------------A
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             11570 19 -     15286 ATGTTTGTC------AC-ATTA--A------------AA------------A
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13209 19 +     18253 ATGTTTGTC------AC-ATTA--A------------AA------------A
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13310 19 -     41752 ATGTTTGTC------AC-ATTA--A------------AA------------A
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13147 19 -     16460 ATGTTTGTC------AC-ATTA--A------------AA------------A
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               241792 19 +    327341 TTCCCTACT------AT-ATTA--A------------TA------------A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                 357 19 +      7595 TTCCATGTC------AC-ATGA--A------------GA------------G
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hoolock_leuconedys.ctg274                                    434295 19 +    630532 ATTCTTGTC------TT-ATTA--A------------GA------------A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  43952 19 +     55795 TTCCCTGTC------AT-ATTA--A------------GA------------A
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 254
s Hylobates_agilis.k141_232023                                2061 19 -     12752 ATTCTTGTC------TT-TTTA--A------------GA------------A
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                               2105 19 +     14092 ATTCTTGTC------TT-TTTA--A------------GA------------A
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189542888 19 - 191637585 ATTCTTGTC------TT-TTTA--A------------GA------------A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3335783 19 -  11177569 ATTCTTGTC------TT-TTTA--A------------GA------------A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7519562  6 -   7955117 --------------------TG--T------------AG------------A
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   22092 19 +     31101 ATCTTTGTC------AC-ATTA--A------------AA------------A
i Indri_indri.k141_3655594                               C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    13337 19 -     42476 TTTCCTGTC------AT-ATTA--A------------GA------------A
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15523656 17 -  30322482 GT--TTGTC------AC-ATTA--A------------AA------------A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        6998 19 +     64341 TTTCTTGTC------TT-ATTT--A------------GA------------A
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           4322 19 +      4941 TTTCTTGTC------TT-ATTT--A------------GA------------A
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        7040 19 +     35603 TTTCTTGTC------TT-ATTA--A------------GA------------A
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    28510 19 +     38576 TTTCTTGTC------TT-ATTA--A------------GA------------A
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         25207 19 +     66356 TTTCTTGTC------TT-ATTA--A------------GA------------A
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         10549 20 -     23766 ATCTTTGTC------AC-ATTAA-A------------AA------------A
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             28611 20 +     45836 ATCTTTGTC------AC-ATTAA-A------------AA------------A
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1150 20 +     25010 ATCTTTGTC------AC-ATTAA-A------------AA------------A
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      26547 20 +     54090 ATCTTTGTC------AC-ATTAA-A------------AA------------A
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3042317 19 +   3914936 TTTCTTGTC------AT-ATTA--A------------GA------------A
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     5725 31 -     14121 TTCCTTGTC------CC-ATTA--AGAAAGTTATTGCAA------------A
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1436650 18 +   1826925 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5212 19 +     11245 GCCTTTGCC------TT-ATTa--a------------aa------------a
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004062 19 +   6120653 GCCTTTGCC------TT-ATta--a------------aa------------a
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4216796 19 -  43346337 TTCCGTGTC------AC-ATGA--A------------CA------------G
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17954594 19 -  59628241 tttcttgtc------AT-ATTA--A------------GT------------A
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               6460 18 +     40492 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59675719 18 +  60120075 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 12232 18 -     26193 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            80016 18 -    114318 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  5707 18 -     23192 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                15176 18 -     29190 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  23741 18 +     37952 -TTCTTGTC------TC-AGTA--A------------GA------------A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186838830 18 + 187317192 -ttcttgtc------tt-agtA--A------------GA------------A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25457393 18 -  25927173 -ttcttgtc------tt-agtA--A------------GA------------A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  79589 18 +     89720 -TTCTTGTC------TC-AGTA--A------------GA------------A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 6590 18 +     20474 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   6390 18 -     14993 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  329256 18 -    668171 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 4706 18 -     24072 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               25328 18 -     45290 -TTCTTGTC------TC-AGTA--A------------GA------------A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90093 19 +     94391 ATTTTAGTC------AT-ATTA--A------------GA------------G
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23936923 18 -  24302211 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               351051 18 +    752769 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33101874  6 -  40650429 --------------------TG--T------------AG------------A
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         9801 18 -    207569 TTCCTTGTC------AT-AT-A--A------------GG------------G
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              9506 19 +     13704 TTCTTTGCC------AC-ATTA--A------------GA------------A
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 32353  6 +    140813 --------------------AG--A------------AG------------A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12181849  6 -  29670104 --------------------AG--T------------AG------------A
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                5275 19 -      7380 TTTCCTGTC------TT-ATTA--A------------GA------------A
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               4348 19 +     18990 TTTCCTGTC------TT-ATTA--A------------GA------------A
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      5287 19 -      7356 TTTCCTGTC------TT-ATTA--A------------GA------------A
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18291072 19 -  93316391 atctttgtc------at-atta--a------------aa------------a
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    21620 24 -    145209 TATCATGTCTGT-GTGC-ATTA--A------------GA------------G
i Microgale_talazaci.MicTal_scaffold_6613                I 3 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                14877 19 -     19307 TTCCTTGTT------GT-ATTA--A------------GA------------G
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850113 19 +   8254450 ctCCTTGTC------AT-ATCA--A------------GA------------G
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             33790 19 +     64694 CTCCTTGTC------AT-ATCA--A------------GA------------G
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           8645 18 -     28506 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         5185 19 -      8324 TTTCTTGTC------AT-ATTA--A------------GA------------A
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      8616 21 -     37649 ATCTTTGTC------AC-ATTAAAA------------AA------------A
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140821 19 -    366855 TTCCTTGTT------CT-ACAC--A------------GA------------A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   34905 19 +     37127 TTCCCTACT------AT-ATTA--A------------GA------------C
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           5984 19 +     14753 TTTCTTGTC------AT-ATTA--A------------AA------------G
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84360969  6 - 120012414 --------------------TG--T------------AG------------A
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87649967  6 - 129401213 --------------------TG--T------------AG------------A
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31354623  6 -  89631738 --------------------TG--T------------AA------------T
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90752028  6 - 130317789 --------------------TG--T------------AG------------A
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               300690 19 -  14710649 ttccttgcc------AC-ATTA--A------------GA------------A
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                279157 19 -  10118263 tttcttgtc------AT-ATTA--A------------GA------------G
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1586850 19 -   6019432 tttcttgtc------AT-ATTA--A------------GA------------G
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902922 19 -   4330536 TTTCTTGTC------AT-ATTA--A------------GA------------G
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              188240 18 +    196477 TTCCATGCT------CC-ATC---A------------AC------------G
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2033456  6 -   3037898 --------------------TG--T------------AG------------A
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               14632 10 +     21681 -TTCTTGTC------TT-----------------------------------
i Nasalis_larvatus.k141_413338                           C 0 I 4
s Neomonachus_schauinslandi.NINY01007730.1                20306439 19 +  31847680 TTTCTTGTC------AT-ATTA--A------------GA------------A
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9148848 19 -   9404916 tttcttgtc------AT-AATA--A------------GT------------A
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102579041 19 - 196305487 ACCTTTGCC------TC-ATTA--A------------AA------------A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_771082                               886 19 -      2667 ACCTTTGCC------TC-ATTA--A------------AA------------A
i Nycticebus_coucang.k141_771082                         C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749462 19 + 199412804 ACCTTTGCC------TC-ATTA--a------------aa------------a
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1362874 31 +   3988456 tttcttgtc------ac-aTCA--AGAAAGCTATTGCAG------------A
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              506124 19 -   2017862 TTTCTTGTC------AT-ATTA--A------------GA------------A
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   24758  6 +     28053 --------------------AG--C------------AG------------A
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    79760  4 +    102263 --------------------AG--T------------A--------------
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9310 19 -     18566 TTCCATGTC------AC-ATTA--G------------GA------------G
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67146554 31 + 174332312 ttccttGTC------CC-ATTA--AGAAAGTTGTTGCAA------------A
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       461816 19 -    559221 tttcttgtc------AT-ATTA--A------------GT------------A
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         3363 19 +      8798 ACCTTTGTC------AT-ATTA--a------------aa------------a
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             695527 19 -   1103335 ACCtttgtc------at-atta--a------------aa------------a
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    43573 19 +     80009 gttCTTGTC------TT-ATTA--A------------GA------------G
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03001836.1                             29498 19 +     51860 gttCTTGTC------TT-ATTA--A------------GA------------G
i Pan_troglodytes.NBAG03001836.1                         I 44 I 350
s Panthera_onca.PanOnc_flattened_line_3271                  150656 18 +    230217 AT-CTTGCC------AT-ATTA--A------------GA------------A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                263862 18 +  18783137 AT-CTTGCC------AT-ATTA--A------------GA------------A
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4720500 18 -   8748460 AT-CTTGCC------AT-ATTA--A------------GA------------A
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183442673 18 + 183742232 -ttcttgtc------tt-agtA--A------------GA------------A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             6371 18 +     20448 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563179 18 +  20919399 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   5115 18 +     41871 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     8400 18 +     27711 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  8481 18 +      9205 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12124 19 -     78924 TTCCTTGTC------AT-ATTA--A------------GA------------A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            9508 19 +     13100 ACCTTTTTC------AC-ttta--a------------aa------------a
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             7910 19 +     25941 ACCTTtttc------ac-ttta--a------------aa------------a
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18194379  6 -  18517816 --------------------GG--T------------GG------------A
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Piliocolobus_badius.k141_1234363                           43134 18 +     62158 -TTCCTGTC------TT-AGTC--A------------GA------------A
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        37865 18 +     89929 -TTCCTGTC------TT-AGTC--A------------GA------------A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            39281 18 +     51399 -TTCCTGTC------TT-AGTC--A------------GA------------A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14295519 18 -  14605196 -ttcctgTC------TT-AGTA--A------------GA------------A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1314 19 +     22620 TTTCTTGTC------AT-ATTA--A------------GA------------G
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189130615 19 + 189387572 GTTCTTGTC------TT-ATTA--A------------GA------------A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570223 19 +   9816681 GTTCTTGTC------TT-ATTA--A------------GA------------A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               72803 18 -     81375 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              4623 18 +     19060 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 12812 19 -     22811 TTCCATGTC------AC-ATGA--A------------GA------------G
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2596334 19 -   4620579 atGTTTGTC------AC-ATTA--A------------AA------------A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990317 20 +   2598838 atctttgtc------ac-atta-aa------------aa------------a
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          28627 19 +     38485 ATCTTTGTC------AC-ATTA--A------------AA------------A
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                               670 19 -     13098 ATCTTTGTC------AC-ATTA--A------------AA------------A
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26148 19 +     35766 ATCTTTGTC------AC-ATTA--A------------AA------------A
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4335 19 -     24134 ATCTTTGTC------AC-ATTA--A------------AA------------A
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28160 19 -     67325 ATCTTTGTC------AC-ATTA--A------------AA------------A
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4383 19 -      6182 ATCTTTGTC------AC-ATTA--A------------AA------------A
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             9992  6 -     21651 --------------------AG--T------------AG------------A
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            14163 19 -     21811 ttccttgtt------ct-tttA--A------------GA------------G
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39706 19 +     42204 TTCCTTGCC------AC-ATTA--A------------GA------------A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22976253 19 +  28871421 atccTAGTC------GT-ATTA--A------------GA------------G
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1359339 19 +   4952924 atccTAGTC------GT-ATTA--A------------GA------------G
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20273810 18 -  38429054 aT-CTTGCC------AT-ATTA--A------------GA------------A
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             14632 18 -     91421 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7608752 18 +   7812017 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             14604 18 -     72585 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53570240  6 +  90668790 --------------------AG--T------------AG------------A
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             6319 18 -     11128 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91235674 18 - 195417433 -ttcttgtc------tt-agtA--A------------GA------------A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7671324 18 +   7961872 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87274 19 -     96226 ATCCTAGTC------AT-ATTA--A------------GA------------G
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               7674 19 -      8359 TTTCTTGTC------TT-ATTA--A------------GA------------A
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_imperator.k141_2524406                             1640 19 +      2197 TTTCTTGTC------TT-GTTA--A------------GA------------A
i Saguinus_imperator.k141_2524406                        C 0 C 0
s Saguinus_inustus.k141_699149                               13052 19 +     13640 TTTCTTGTC------TT-GTTA--A------------GA------------A
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               7921 19 +      8564 TTTCTTGTC------TT-GTTA--A------------GA------------A
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209468770 19 + 209938924 TTTCTTGTC------TT-ATTA--A------------GA------------A
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 7479 19 -      9399 TTTCTTGTC------TT-GTTA--A------------GA------------A
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119950402 19 - 121099817 tttcttgtc------tc-ATTA--A------------GA------------A
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       22858 19 +     46362 TTTCTTGTC------TC-ATTA--A------------GA------------A
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               22953 19 +     45824 TTTCTTGTC------TC-ATTA--A------------GA------------A
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             39581 19 -     64574 TTTCTTGTC------TC-ATTA--A------------GA------------A
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               2587 19 -     23631 TTTCTTGTC------TC-ATTA--A------------GA------------A
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 22849 19 -     61129 TTTCTTGTC------TC-ATTA--A------------GA------------A
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420173 19 -   5703754 TTTCTTGTC------TT-ATTA--A------------GA------------A
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          55214 19 -     80660 TTTCTTGTC------TT-ATTA--A------------GA------------A
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    152639 17 -    313613 TCCCTTG--------AT-ACTA--C------------AA------------G
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          19143 18 -     19888 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26346 18 +     39453 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            6865 18 +     27826 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             6386 18 -     19483 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      6454 18 +      7198 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         14712 18 +     15514 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11512  6 -     12148 --------------------AG--A------------AA------------A
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               3271 19 +   1910179 TTCCTTGTC------AT-ATTA--A------------GA------------G
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13650519 18 -  18376816 -CCTTTGTT------AT-ATAA--A------------GA------------A
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1952747  6 -   3870691 --------------------TG--T------------AG------------A
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30206 19 +     97271 TTCCTTGTC------AC-ATTA--A------------GA------------A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              17791 19 -    196729 TTCCCTACT------AT-ATTA--A------------TA------------A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6809964 19 +  69701581 ttccttgTC------AC-ATTA--A------------GA------------G
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1092930 19 -   1523678 ATTCTTGTC------TT-ATTA--A------------GA------------A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 71600 17 +    116680 TT-CATGCT------CC-ATC---A------------AA------------G
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118224 19 -    156842 TTCCTTGTC------AT-ATTA--A------------GA------------G
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    386677 19 +    539355 TTCCTTGTC------AT-ATTA--A------------GA------------G
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               25929 19 +     70052 TTTCTTGTG------AC-ATTG--A------------GA------------A
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                 762 19 -     16117 TTTCTTGTG------AC-ATTG--A------------GA------------A
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428043 18 + 186847797 -ttcttgtc------tt-agtA--A------------GA------------A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   5452 18 +      8208 TTCCATGCC------AC-ATC---A------------GA------------G
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     80407 19 +    610378 TTCCTTGTG------CT-ATTA--A------------GA------------G
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         10437 18 -     20410 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    14631 18 +     15221 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                       10538 18 +     19930 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       6965 18 -     19997 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            47089 18 -     60166 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        14560 18 -     27529 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     14504 18 -     18194 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           8232 18 -     21137 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    6935 18 -     10723 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         6091 18 +      9834 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        24404 18 +     32220 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5938506 18 +   6242583 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        7758 18 +     20839 -TTCTTGTC------TT-AGTA--A------------GA------------A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4292726 19 +  10818551 TTCCATGTC------AC-ATTA--A------------GA------------C
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2155148 31 +   4065304 ttccttatt------ac-ACTC--A------------GAAGGCTACTATAGA
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     8796 31 -     10553 TTCCTTATT------AC-ACTC--A------------GAAGGCTACTATAGA
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   52800 19 -     77625 TCGCTTATC------AT-ATTA--T------------AA------------G
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4849911 19 -   5085361 TTCCTTGTC------AT-ATTA--A------------GA------------A
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  10994 19 +     50397 ATGTTTGTC------AC-ATTA--A------------AA------------A
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11053 19 +     24756 ATGTTTGTC------AC-ATTA--A------------AA------------A
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371339 19 -   5488506 ttcCTTGTC------AT-ATTA--A------------CA------------G
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10261 19 -     43706 TTTCTTGTC------AT-ATTA--A------------GT------------A
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        23945  6 -     24430 --------------------TG--T------------AG------------A
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          4632 19 +     86975 TTTCTTGTC------AT-ATTA--A------------GA------------A
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      14518  6 +     63895 --------------------TG--T------------AG------------A
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                10012  0 +     41958 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50341  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352  0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Colobus_guereza.LG01                                   199948958  0 + 200372422 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    136758  0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6244 2 +     62944 G-T
s Acinonyx_jubatus.LLWD01001279.1                           826821 2 -   1699592 G-G
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     70420 2 +     87051 G-A
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510070 2 -  29979442 C-G
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             78839 2 -    347723 C-G
i Ailurus_fulgens.LNAC01001112.1                         I 3 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     74211 2 -     89534 A-A
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14172 2 -     52922 G-T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         14108 2 -     28001 G-T
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          4604 2 -     18505 G-T
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           5457 2 -     12518 G-T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                              2891 2 -     27731 G-T
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                3022 2 +      3134 G-T
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               3150 2 -     45847 G-T
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                24360 2 +     25266 G-T
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_918386                              85 2 -      9457 C-T
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_3472759                            17656 2 -     18578 G-T
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              3055 2 +     47717 G-T
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             3155 2 -      3544 G-T
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             14379 2 +     50774 G-T
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184571 2 +    412891 G-G
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  14999 2 -     33861 G-T
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            15019 2 -     34016 G-T
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297416 2 -   5030052 G-T
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             15021 2 -     34685 G-T
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28145 2 -     47192 G-T
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      11432 2 +     20879 G-G
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       10897 2 +     14667 g-a
i Arctocebus_calabarensis.k141_2318572                   C 0 I 232
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3978 2 +     43469 G-G
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  53290 2 -     92717 A-G
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              53917 2 +     85213 A-G
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             4754 2 -     10423 G-T
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             24228 2 +     31915 G-T
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            4720 2 +      5267 G-T
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23589934 2 - 189096842 G-T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             11465 2 -     12001 G-T
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10001856 2 -  17673402 G-G
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334314 2 -   7040546 G-G
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  402597 2 -   1652518 G-G
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17798665 2 -  60362399 T-T
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184722 2 -    185531 T-T
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034108 2 -   9314153 T-T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17958373 2 -  59632846 T-T
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18499885 2 +  63665305 T-T
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007247396.1                           200929 2 +    308752 A-G
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                4341 2 -     11696 G-G
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     92488 2 +    217609 G-G
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          9379 2 -     11392 G-T
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               5477 2 -      7577 G-T
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25651521 2 +  26074798 G-C
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_398305                                 1097 2 +      1777 G-C
i Cebus_olivaceus.k141_398305                            C 0 C 0
s Cebus_unicolor.k141_544048                                 49434 2 -     74725 G-C
i Cebus_unicolor.k141_544048                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         4936 2 +     31688 A-G
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12230916 2 +  27778364 G-G
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1943 2 -     25243 G-G
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4475121 2 +   4669795 G-T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        13666 2 -     19203 G-T
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3342297                            282 2 -     14043 G-T
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           8318 2 +     27781 G-T
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         8479 2 -     20310 G-T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          11458 2 +     29689 G-T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            6216 2 -     20078 G-T
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          14137 2 -     27936 G-T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            3003 2 -     17152 G-T
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38816538 2 +  39242232 G-T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222232 2 -  21565898 G-T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       39350 2 -     53127 G-T
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        6618 2 +      7159 G-T
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14153 2 -     27947 G-T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         14126 2 +     17596 G-T
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                           175 2 +     14005 G-T
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_713168            1938 2 -      2554 G-G
i Chaetophractus_vellerosus.ChaVel_scaffold_713168       C 0 C 0
s Cheirogaleus_major.k141_333249                             20669 2 -     52598 A-G
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16034 2 +     57038 A-G
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                          10631 2 +     11226 G-T
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18428108 2 -  18827391 G-T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       14545 2 -     50209 G-T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135421545 2 + 135778131 G-T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 17357 2 +     19366 G-G
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            172454 2 +    839153 G-G
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1910054 2 +   2368649 G-T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_polykomos.k141_906115                              36592 2 +     84244 G-T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17547588 2 -  53390261 G-A
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          13904 2 -     20389 G-G
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 49682 2 +     63868 A-A
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11667177 2 + 224834208 C-A
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               2494 2 -     19598 G-A
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27976 2 -     87169 G-G
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    836680 2 +   1526836 G-G
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            62607 2 +   2246927 G-G
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12536894 2 -  12879189 A-G
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8629355 2 +  20541912 G-G
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672767 2 +   1390856 G-C
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    5519 2 +    198055 G-G
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Echinops_telfairi.JH980293.1                            48779916 2 + 111700974 A-A
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.KE759718.1                                  10015 2 +     11740 G-G
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1097207 2 +  10337057 G-G
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          19927 2 -    110024 G-A
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01109367.1                            6015 2 -      6299 G-A
i Ellobius_talpinus.LOJH01109367.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16328808 2 -  41312741 C-A
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144939 2 -  14770903 G-G
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1282831 2 +   4378816 G-G
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18530652 2 -  39960074 G-G
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               32667 2 +    498745 G-G
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21204715 2 -  21539334 G-T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13394 2 -     14127 A-G
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6095 2 -     16928 A-G
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15121 2 -     25546 A-G
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12330 2 +     26330 A-G
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 13558 2 +     23973 A-G
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12327 2 +     75513 A-G
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10253 2 +     97555 A-G
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            13184 2 +     26496 A-G
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  3794 2 -     17153 A-G
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13369 2 +    111500 A-G
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20236472 2 + 206538554 G-G
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195315 2 + 205367284 G-G
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  8829 2 -     36744 G-G
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     425850 2 -    453645 a-a
i Galago_moholi.ctg2040                                  C 0 I 413
s Galago_senegalensis.k141_631886                             3557 2 +     11339 a-a
i Galago_senegalensis.k141_631886                        C 0 I 397
s Galagoides_demidoff.k141_1711393                             860 2 +     41679 a-a
i Galagoides_demidoff.k141_1711393                       C 0 I 408
s Galeopterus_variegatus.GalVar_scaffold_108840                732 2 -      9135 G-G
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              15499 2 -     32273 G-T
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186337645 2 + 186649187 G-T
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6440 2 -     19426 A-G
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             11589 2 -     15286 A-G
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13228 2 +     18253 A-G
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13329 2 -     41752 A-G
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13166 2 -     16460 A-G
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               241811 2 +    327341 G-G
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                 376 2 +      7595 G-G
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hoolock_leuconedys.ctg274                                    434314 2 +    630532 G-T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  44225 2 +     55795 G-G
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 254 C 0
s Hylobates_agilis.k141_232023                                2080 2 -     12752 G-T
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                               2124 2 +     14092 G-T
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189542907 2 - 191637585 G-T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3335802 2 -  11177569 G-T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7519568 2 -   7955117 G-G
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   22111 2 +     31101 A-G
i Indri_indri.k141_3655594                               C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    13356 2 -     42476 G-G
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15523673 2 -  30322482 A-G
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7017 2 +     64341 G-T
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           4341 2 +      4941 G-T
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        7059 2 +     35603 G-T
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    28529 2 +     38576 G-T
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         25226 2 +     66356 G-T
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         10569 2 -     23766 A-A
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             28631 2 +     45836 A-A
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1170 2 +     25010 A-G
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      26567 2 +     54090 A-A
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3042336 2 +   3914936 T-G
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     5756 2 -     14121 A-G
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1436668 2 +   1826925 G-T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5231 2 +     11245 g-a
i Loris_lydekkerianus.k141_2539221                       C 0 I 281
s Loris_tardigradus.ctg83                                  1004081 2 +   6120653 g-a
i Loris_tardigradus.ctg83                                C 0 I 251
s Loxodonta_africana.GL010049.1                            4216815 2 -  43346337 G-G
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17954613 2 -  59628241 T-T
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               6478 2 +     40492 G-T
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59675737 2 +  60120075 G-T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 12250 2 -     26193 G-T
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            80034 2 -    114318 G-T
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  5725 2 -     23192 G-T
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                15194 2 -     29190 G-T
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  23759 2 +     37952 G-T
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186838848 2 + 187317192 G-T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25457411 2 -  25927173 G-T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  79607 2 +     89720 G-T
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 6608 2 +     20474 G-T
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   6408 2 -     14993 G-T
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  329274 2 -    668171 G-T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 4724 2 -     24072 G-T
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               25346 2 -     45290 G-T
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90112 2 +     94391 G-G
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23936941 2 -  24302211 G-T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               351069 2 +    752769 G-T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33101880 2 -  40650429 G-G
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         9819 2 -    207569 G-G
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              9525 2 +     13704 C-A
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 32359 2 +    140813 G-A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12181855 2 -  29670104 C-A
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                5294 2 -      7380 G-T
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               4367 2 +     18990 G-T
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      5306 2 -      7356 G-T
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18291091 2 -  93316391 a-g
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    21644 2 -    145209 A-A
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                14896 2 -     19307 G-G
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850132 2 +   8254450 G-G
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             33809 2 +     64694 G-G
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           8663 2 -     28506 G-T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         5204 2 -      8324 C-G
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      8637 2 -     37649 A-G
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140840 1 -    366855 G--
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   34924 2 +     37127 G-A
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           6003 2 +     14753 G-G
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84360975 2 - 120012414 G-A
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87649973 2 - 129401213 G-A
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31354629 2 -  89631738 G-A
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90752034 2 - 130317789 G-A
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               300709 2 -  14710649 C-G
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                279176 2 -  10118263 G-G
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1586869 2 -   6019432 G-G
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902941 2 -   4330536 G-G
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              188258 2 +    196477 G-G
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2033462 2 -   3037898 G-G
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               14646 2 +     21681 G-T
i Nasalis_larvatus.k141_413338                           I 4 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306458 2 +  31847680 C-G
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9148867 2 -   9404916 C-T
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102579060 2 - 196305487 G-A
i Nycticebus_bengalensis.LG01                            C 0 I 244
s Nycticebus_coucang.k141_771082                               905 2 -      2667 G-A
i Nycticebus_coucang.k141_771082                         C 0 I 244
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749481 2 + 199412804 g-a
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 251
s Ochotona_princeps.JH802162.1                             1362905 2 +   3988456 A-T
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              506143 2 -   2017862 C-G
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   24764 2 +     28053 G-A
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    79764 2 +    102263 G-A
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9329 2 -     18566 G-G
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67146585 2 + 174332312 A-G
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       461835 2 -    559221 T-T
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         3382 2 +      8798 a-a
i Otolemur_crassicaudatus.k141_222918                    C 0 I 414
s Otolemur_garnettii.GL873799.1                             695546 2 -   1103335 a-a
i Otolemur_garnettii.GL873799.1                          C 0 I 415
s Pan_paniscus.KQ411613.1                                    43592 2 +     80009 G-T
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189142500 2 + 189151597 G-T
i Pan_troglodytes.CM009242.2                             I 19 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  150674 2 +    230217 G-G
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                263880 2 +  18783137 G-G
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4720518 2 -   8748460 G-G
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183442691 2 + 183742232 G-T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             6389 2 +     20448 G-T
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563197 2 +  20919399 G-T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   5133 2 +     41871 G-T
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     8418 2 +     27711 G-T
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  8499 2 +      9205 G-T
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12143 2 -     78924 G-G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            9527 2 +     13100 g-a
i Perodicticus_ibeanus.k141_855320                       C 0 I 237
s Perodicticus_potto.k141_1092580                             7929 2 +     25941 g-a
i Perodicticus_potto.k141_1092580                        C 0 I 241
s Peromyscus_maniculatus.KI615324.1                       18194385 2 -  18517816 G-A
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Piliocolobus_badius.k141_1234363                           43152 2 +     62158 G-T
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        37883 2 +     89929 G-T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            39299 2 +     51399 G-T
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14295537 2 -  14605196 G-T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1333 2 +     22620 G-G
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189130634 2 + 189387572 G-T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570242 2 +   9816681 G-T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               72821 2 -     81375 G-T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              4641 2 +     19060 G-T
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 12831 2 -     22811 G-G
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2596353 2 -   4620579 A-G
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990337 2 +   2598838 a-g
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          28646 2 +     38485 A-G
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                               689 2 -     13098 A-G
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26167 2 +     35766 A-G
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4354 2 -     24134 A-G
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28179 2 -     67325 A-G
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4402 2 -      6182 A-G
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                             9998 2 -     21651 G-A
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            14182 2 -     21811 A-G
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39725 2 +     42204 C-G
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22976272 2 +  28871421 G-G
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1359358 2 +   4952924 G-G
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20273828 2 -  38429054 G-G
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             14650 2 -     91421 G-T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7608770 2 +   7812017 G-T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             14622 2 -     72585 G-T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53570246 2 +  90668790 C-A
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             6337 2 -     11128 G-T
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91235692 2 - 195417433 G-T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7671342 2 +   7961872 G-T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87293 2 -     96226 A-G
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               7693 2 -      8359 G-T
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_imperator.k141_2524406                             1659 2 +      2197 G-T
i Saguinus_imperator.k141_2524406                        C 0 C 0
s Saguinus_inustus.k141_699149                               13071 2 +     13640 G-T
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               7940 2 +      8564 G-T
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209468789 2 + 209938924 G-T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 7498 2 -      9399 G-T
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119950421 2 - 121099817 G-T
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       22877 2 +     46362 G-T
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               22972 2 +     45824 G-T
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             39600 2 -     64574 G-T
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               2606 2 -     23631 G-T
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 22868 2 -     61129 G-T
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420192 2 -   5703754 G-C
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          55233 2 -     80660 G-C
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    152656 2 -    313613 G-G
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 4
s Semnopithecus_entellus.k141_11662                          19161 2 -     19888 G-T
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26364 2 +     39453 G-T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            6883 2 +     27826 G-T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             6404 2 -     19483 G-T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      6472 2 +      7198 G-T
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         14730 2 +     15514 G-T
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11518 2 -     12148 G-A
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               3290 2 +   1910179 G-A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13650537 2 -  18376816 G-A
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1952753 2 -   3870691 G-G
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30225 2 +     97271 T-G
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              17810 2 -    196729 G-G
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6809983 2 +  69701581 G-G
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1092949 2 -   1523678 G-T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 71617 2 +    116680 G-G
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118243 2 -    156842 G-G
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    386696 2 +    539355 G-G
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               25948 2 +     70052 A-G
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                 781 2 -     16117 A-G
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428061 2 + 186847797 G-T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   5470 2 +      8208 G-G
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     80426 2 +    610378 G-G
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         10455 2 -     20410 G-T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    14649 2 +     15221 G-T
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                       10556 2 +     19930 G-T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       6983 2 -     19997 G-T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            47107 2 -     60166 G-T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        14578 2 -     27529 G-T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     14522 2 -     18194 G-T
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           8250 2 -     21137 G-T
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    6953 2 -     10723 G-T
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         6109 2 +      9834 G-T
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        24422 2 +     32220 G-T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5938524 2 +   6242583 G-T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        7776 2 +     20839 G-T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4292745 2 +  10818551 G-G
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2155179 2 +   4065304 G-G
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     8827 2 -     10553 G-G
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   52819 2 -     77625 A-G
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4849930 2 -   5085361 C-G
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  11013 2 +     50397 A-G
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11072 2 +     24756 A-G
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371358 2 -   5488506 A-G
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10280 2 -     43706 C-T
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        23951 3 -     24430 GGG
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          4651 2 +     86975 C-G
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      14524 2 +     63895 A-A
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937 0 +    114563 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                10012 0 +     41958 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813 0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50341 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352 0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547 0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084 0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Colobus_guereza.LG01                                   199948958 0 + 200372422 C
e Chinchilla_lanigera.JH722012.1                           1251498 0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157 0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    136758 0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6246 8 +     62944 CTATGGTA
s Acinonyx_jubatus.LLWD01001279.1                           826823 2 -   1699592 TT------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 15
s Acomys_cahirinus.AcoCah_scaffold_12655                     70422 2 +     87051 GT------
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510072 2 -  29979442 TT------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 15
s Ailurus_fulgens.LNAC01001112.1                             78841 2 -    347723 TT------
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 15
s Allactaga_bullata.AllBul_scaffold_9566                     74213 2 -     89534 TT------
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14174 8 -     52922 CTATGGTA
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         14110 8 -     28001 CTATGGTA
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          4606 8 -     18505 CTATGGTA
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           5459 8 -     12518 CTATGGTA
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                              2893 8 -     27731 CTATGGTA
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                3024 8 +      3134 CTATGGTA
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               3152 8 -     45847 CTGTGGTA
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                24362 8 +     25266 CTATGGTA
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_918386                              87 8 -      9457 CTATGGTA
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_3472759                            17658 8 -     18578 CTATGGTA
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              3057 8 +     47717 CTATGCTA
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             3157 8 -      3544 CTATGGTA
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             14381 8 +     50774 CTATGGTA
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184573 2 +    412891 CT------
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 4
s Aotus_azarae.k141_3104676                                  15001 8 -     33861 CTATGGTA
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            15021 8 -     34016 CTATGGTA
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297418 8 -   5030052 CTATGGTA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             15023 8 -     34685 CTATGGTA
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28147 8 -     47192 CTATGGTA
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      11434 2 +     20879 GA------
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       11131 8 +     14667 ctgctgtg
i Arctocebus_calabarensis.k141_2318572                   I 232 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3980 2 +     43469 TT------
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 4
s Avahi_laniger.k141_765380                                  53292 8 -     92717 ACACTGTA
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              53919 8 +     85213 ACACTGTA
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             4756 8 -     10423 CTGTGGTA
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             24230 8 +     31915 CTGTGGTA
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            4722 8 +      5267 CTGTGGTA
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23589936 8 - 189096842 CTGTGGTA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             11467 8 -     12001 CTGTGGTA
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10001858 2 -  17673402 TT------
i Camelus_bactrianus.KN276810.1                          C 0 I 12
s Camelus_dromedarius.KN272107.1                           2334316 2 -   7040546 TT------
i Camelus_dromedarius.KN272107.1                         C 0 I 12
s Camelus_ferus.KB017975.1                                  402599 2 -   1652518 TT------
i Camelus_ferus.KB017975.1                               C 0 I 12
s CanFam4.chr16                                           17798667 2 -  60362399 TT------
i CanFam4.chr16                                          C 0 I 15
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184724 2 -    185531 TT------
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 I 15
s Canis_lupus_dingo.QKWQ01000480.1                         9034110 2 -   9314153 TT------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 15
s Canis_lupus_familiaris.chr16                            17958375 2 -  59632846 TT------
i Canis_lupus_familiaris.chr16                           C 0 I 15
s Canis_lupus_orion.HG994398.1                            18499887 2 +  63665305 TT------
i Canis_lupus_orion.HG994398.1                           C 0 I 15
s Carlito_syrichta.NW_007247396.1                           200931 8 +    308752 CTATTGTA
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                4343 2 -     11696 CT------
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 4
s Catagonus_wagneri.CatWag_scaffold_2839                     92490 2 +    217609 CT------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 2
s Cebuella_niveiventris.k141_1251222                          9381 8 -     11392 CTGTGGTA
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               5479 8 -      7577 CTGTGGTA
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25651523 8 +  26074798 CTATGGTA
i Cebus_albifrons.Contig27                               C 0 I 10
s Cebus_olivaceus.k141_398305                                 1099 8 +      1777 CTATGGTA
i Cebus_olivaceus.k141_398305                            C 0 I 10
s Cebus_unicolor.k141_544048                                 49436 8 -     74725 CTATGGTA
i Cebus_unicolor.k141_544048                             C 0 I 10
s Cephalopachus_bancanus.k141_1423433                         4938 8 +     31688 CTACTGTA
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12230918 2 +  27778364 CT------
i Ceratotherium_simum.JH767749.1                         C 0 I 12
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1945 2 -     25243 CT------
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 I 12
s Cercocebus_atys.KQ010504.1                               4475123 8 +   4669795 CTATGGTA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        13668 8 -     19203 CTATGGTA
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3342297                            284 8 -     14043 CTATGGTA
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           8320 8 +     27781 CTATGGTA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         8481 8 -     20310 CTGTGGTA
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          11460 8 +     29689 CTGTGGTA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            6218 8 -     20078 CTATGGTA
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          14139 8 -     27936 CTGTGGTA
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            3005 8 -     17152 CTATGGTA
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38816540 8 +  39242232 CTGTGGTA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222234 8 -  21565898 CTATGGTA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       39352 8 -     53127 CTATGGTA
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        6620 8 +      7159 CTGTGGTA
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14155 8 -     27947 CTGTGGTA
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         14128 8 +     17596 CTATGGTA
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                           177 8 +     14005 CTATGGTA
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_713168            1940 2 -      2554 CA------
i Chaetophractus_vellerosus.ChaVel_scaffold_713168       C 0 I 12
s Cheirogaleus_major.k141_333249                             20671 8 -     52598 ACGCTGTA
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16036 8 +     57038 ACACTGTA
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                          10633 8 +     11226 CTGTGGCA
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18428110 8 -  18827391 CTATGGTA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       14547 8 -     50209 CTATGGTA
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135421547 8 + 135778131 CTATGGTA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 17359 2 +     19366 AT------
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 I 11
s Choloepus_hoffmanni.KN194906.1                            172456 2 +    839153 AT------
i Choloepus_hoffmanni.KN194906.1                         C 0 I 11
s Colobus_angolensis.KN981557.1                            1910056 8 +   2368649 CTATGGTA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_polykomos.k141_906115                              36594 8 +     84244 CTATGGTG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17547590 2 -  53390261 CT------
i Condylura_cristata.JH655891.1                          C 0 I 12
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          13906 2 -     20389 CT------
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 12
s Cricetomys_gambianus.CriGam_scaffold_18520                 49684 2 +     63868 AT------
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11667179 2 + 224834208 GT------
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               2496 2 -     19598 TT------
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 I 12
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27978 2 -     87169 TT------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 15
s Ctenodactylus_gundi.CteGun_scaffold_65                    836682 2 +   1526836 GC------
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            62609 2 +   2246927 CA------
i Dasypus_novemcinctus.JH564415.1                        C 0 I 12
s Daubentonia_madagascariensis.ctg71                      12536896 8 -  12879189 ACGCTGTA
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8629357 2 +  20541912 CT------
i Desmodus_rotundus.KZ672289.1                           C 0 I 4
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672769 2 +   1390856 CT------
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 12
s Diceros_bicornis.DicBicMic_scaffold_5955                    5521 2 +    198055 CT------
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 12
s Echinops_telfairi.JH980293.1                            48779918 2 + 111700974 CT------
i Echinops_telfairi.JH980293.1                           C 0 I 11
s Eidolon_helvum.KE759718.1                                  10017 2 +     11740 CC------
i Eidolon_helvum.KE759718.1                              C 0 I 12
s Elephantulus_edwardii.JH947257.1                         1097209 2 +  10337057 CT------
i Elephantulus_edwardii.JH947257.1                       C 0 I 11
s Ellobius_lutescens.LOEQ01008920.1                          19929 2 -    110024 GT------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 3
s Ellobius_talpinus.LOJH01109367.1                            6017 2 -      6299 GT------
i Ellobius_talpinus.LOJH01109367.1                       C 0 I 3
s Enhydra_lutris.KZ291758.1                               16328810 2 -  41312741 CT------
i Enhydra_lutris.KZ291758.1                              C 0 I 15
s Eptesicus_fuscus.JH977646.1                              2144941 2 -  14770903 CC------
i Eptesicus_fuscus.JH977646.1                            C 0 I 4
s Equus_asinus.JREZ01000139.1                              1282833 2 +   4378816 CT------
i Equus_asinus.JREZ01000139.1                            C 0 I 218
s Equus_caballus.CM000403.2                               18530654 2 -  39960074 CT------
i Equus_caballus.CM000403.2                              C 0 I 217
s Equus_przewalskii.KK951119.1                               32669 2 +    498745 CT------
i Equus_przewalskii.KK951119.1                           C 0 I 231
s Erythrocebus_patas.Contig38                             21204717 8 -  21539334 CTATGGTA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13396 8 -     14127 ACACTGTA
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6097 8 -     16928 ACACTGTA
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15123 8 -     25546 ACACTGTA
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12332 8 +     26330 ACACTGTA
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 13560 8 +     23973 ACACTGTA
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12329 8 +     75513 ACACTGTA
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10255 8 +     97555 ACACTGTA
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            13186 8 +     26496 ACACTGTA
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  3796 8 -     17153 ACACTGTA
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13371 8 +    111500 ACACTGTA
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20236474 2 + 206538554 TT------
i Felis_catus.CM001381.2                                 C 0 I 15
s Felis_catus_fca126.CM031415.1                           20195317 2 + 205367284 TT------
i Felis_catus_fca126.CM031415.1                          C 0 I 15
s Felis_nigripes.FelNig_flattened_line_20823                  8831 2 -     36744 TT------
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 15
s Galago_moholi.ctg2040                                     426265 8 -    453645 ctgatgtg
i Galago_moholi.ctg2040                                  I 413 C 0
s Galago_senegalensis.k141_631886                             3956 8 +     11339 CTGATGTG
i Galago_senegalensis.k141_631886                        I 397 C 0
s Galagoides_demidoff.k141_1711393                            1270 8 +     41679 ctgatgtg
i Galagoides_demidoff.k141_1711393                       I 408 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840                734 2 -      9135 CT------
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              15501 8 -     32273 CTATGGTA
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186337647 8 + 186649187 CTATGGTA
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6442 8 -     19426 ACACTGTA
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             11591 8 -     15286 ACACTGTA
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13230 8 +     18253 ACACTGTA
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13331 8 -     41752 ACACTGTA
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13168 8 -     16460 ACACTGTA
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               241813 2 +    327341 TT------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 15
s Heterohyrax_brucei.HetBruBak_scaffold_122365                 378 2 +      7595 CT------
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 I 12
s Hoolock_leuconedys.ctg274                                    434316 8 +    630532 CTATGGTA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  44227 2 +     55795 TT------
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 15
s Hylobates_agilis.k141_232023                                2082 8 -     12752 CTATGGTA
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                               2126 8 +     14092 CTATGGTA
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189542909 8 - 191637585 CTATGGTA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3335804 8 -  11177569 CTATGGTA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7519570 2 -   7955117 AA------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   22113 8 +     31101 ACATTGTA
i Indri_indri.k141_3655594                               C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    13358 2 -     42476 CT------
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 4
s Lemur_catta.scaffold_24                                 15523675 8 -  30322482 ACACTGTA
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7019 8 +     64341 CTGTGGCA
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           4343 8 +      4941 CTGTGGCA
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        7061 8 +     35603 CTGTGGCA
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    28531 8 +     38576 CTGTGGTA
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         25228 8 +     66356 CTGTGGTA
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         10571 8 -     23766 GCACTGTA
i Lepilemur_ankaranensis.k141_596936                     C 0 I 2
s Lepilemur_dorsalis.k141_577674                             28633 8 +     45836 GCACTGTA
i Lepilemur_dorsalis.k141_577674                         C 0 I 1
s Lepilemur_ruficaudatus.k141_121139                          1172 7 +     25010 -CACTGTA
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      26569 8 +     54090 GCACTGTA
i Lepilemur_septentrionalis.k141_185316                  C 0 I 1
s Leptonychotes_weddellii.KB714746.1                       3042338 2 +   3914936 TT------
i Leptonychotes_weddellii.KB714746.1                     C 0 I 15
s Lepus_americanus.LepAme_scaffold_107385                     5758 2 -     14121 TT------
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1436670 8 +   1826925 CTATGGTA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5514 7 +     11245 tt-ctatg
i Loris_lydekkerianus.k141_2539221                       I 281 C 0
s Loris_tardigradus.ctg83                                  1004334 7 +   6120653 tt-ctatg
i Loris_tardigradus.ctg83                                I 251 C 0
s Loxodonta_africana.GL010049.1                            4216817 2 -  43346337 CT------
i Loxodonta_africana.GL010049.1                          C 0 I 12
s Lycaon_pictus.CM007581.1                                17954615 2 -  59628241 TT------
i Lycaon_pictus.CM007581.1                               C 0 I 15
s Macaca_arctoides.k141_2326796                               6480 8 +     40492 CTATGGTA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59675739 8 +  60120075 CTATGGTA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 12252 8 -     26193 CTATGGTA
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            80036 8 -    114318 CTATGGTA
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  5727 8 -     23192 CTATGGTA
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                15196 8 -     29190 CTATGGTA
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  23761 8 +     37952 CTATGGTA
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186838850 8 + 187317192 CTATGGTA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25457413 8 -  25927173 CTATGGTA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  79609 8 +     89720 CTATGGTA
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 6610 8 +     20474 CTATGGTA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   6410 8 -     14993 CTATGGTA
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  329276 8 -    668171 CTATGGTA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 4726 8 -     24072 CTATGGTA
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               25348 8 -     45290 CTATGGTA
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90114 2 +     94391 CC------
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 12
s Mandrillus_leucophaeus.scaffold280                      23936943 8 -  24302211 CTATGCTA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               351071 8 +    752769 CTATGCTA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33101882 2 -  40650429 AA------
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         9821 2 -    207569 CT------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 12
s Mellivora_capensis.MelCap_flattened_line_69365              9527 2 +     13704 CT------
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 15
s Meriones_unguiculatus.MerUng_scaffold_7390                 32361 2 +    140813 GC------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12181857 2 -  29670104 GT------
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                5296 8 -      7380 CTGTGGTA
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               4369 8 +     18990 CTGTGGTA
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      5308 8 -      7356 CTGTGGTA
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18291093 8 -  93316391 aCACTGTA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    21646 2 -    145209 TT------
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 11
s Micronycteris_hirsuta.MicHir_scaffold_52381                14898 2 -     19307 CT------
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 4
s Miniopterus_natalensis.LDJU01000034.1                    1850134 2 +   8254450 CT------
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 4
s Miniopterus_schreibersii.MinSch_scaffold_18080             33811 2 +     64694 CT------
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 4
s Miopithecus_ogouensis.k141_534055                           8665 8 -     28506 CTGTGGTA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         5206 2 -      8324 TT------
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 15
s Mirza_zaza.k141_952172                                      8639 8 -     37649 ACACTGTA
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140841 2 -    366855 GT------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 4
s Mungos_mungo.MunMun_flattened_line_23663                   34926 2 +     37127 TT------
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 14
s Murina_feae.MurFea_scaffold_85699                           6005 2 +     14753 CA------
i Murina_feae.MurFea_scaffold_85699                      C 0 I 4
s Mus_caroli.LT608237.1                                   84360977 2 - 120012414 GT------
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87649975 2 - 129401213 GT------
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31354631 2 -  89631738 GT------
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90752036 2 - 130317789 GT------
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               300711 2 -  14710649 TT------
i Mustela_putorius.JH418006.1                            C 0 I 15
s Myotis_brandtii.KE162005.1                                279178 2 -  10118263 CG------
i Myotis_brandtii.KE162005.1                             C 0 I 4
s Myotis_davidii.KB100139.1                                1586871 2 -   6019432 CT------
i Myotis_davidii.KB100139.1                              C 0 I 4
s Myotis_lucifugus.GL429869.1                              3902943 2 -   4330536 CT------
i Myotis_lucifugus.GL429869.1                            C 0 I 4
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              188260 2 +    196477 CT------
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 I 14
s Nannospalax_galili.KL204047.1                            2033464 2 -   3037898 AC------
i Nannospalax_galili.KL204047.1                          C 0 I 5
s Nasalis_larvatus.k141_413338                               14648 8 +     21681 CTATGGTA
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306460 2 +  31847680 TT------
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 15
s Nyctereutes_procyonoides.CAJHUB010000658.1               9148869 2 -   9404916 TT------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 15
s Nycticebus_bengalensis.LG01                            102579306 7 - 196305487 ct-ctacA
i Nycticebus_bengalensis.LG01                            I 244 C 0
s Nycticebus_coucang.k141_771082                              1151 7 -      2667 ct-ctaca
i Nycticebus_coucang.k141_771082                         I 244 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749734 7 + 199412804 ct-ctaca
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 251 C 0
s Ochotona_princeps.JH802162.1                             1362907 2 +   3988456 AT------
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              506145 2 -   2017862 TT------
i Odobenus_rosmarus.KB229312.1                           C 0 I 15
s Ondatra_zibethicus.OndZib_scaffold_46174                   24766 2 +     28053 GT------
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 12
s Onychomys_torridus.OnyTor_scaffold_2986                    79766 2 +    102263 GT------
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9331 2 -     18566 TT------
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 I 11
s Oryctolagus_cuniculus.CM000791.1                        67146587 2 + 174332312 TT------
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       461837 2 -    559221 TT------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 15
s Otolemur_crassicaudatus.k141_222918                         3798 8 +      8798 ctgatgtg
i Otolemur_crassicaudatus.k141_222918                    I 414 C 0
s Otolemur_garnettii.GL873799.1                             695963 8 -   1103335 ctgatgtg
i Otolemur_garnettii.GL873799.1                          I 415 C 0
s Pan_paniscus.KQ411613.1                                    43594 8 +     80009 CTATAGTA
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189142502 8 + 189151597 CTATGGTA
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  150676 2 +    230217 TT------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 15
s Panthera_pardus.KV860321.1                                263882 2 +  18783137 TT------
i Panthera_pardus.KV860321.1                             C 0 I 15
s Panthera_tigris.KE722367.1                               4720520 2 -   8748460 TT------
i Panthera_tigris.KE722367.1                             C 0 I 15
s Papio_anubis.CM001495.2                                183442693 8 + 183742232 CTATGGTA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             6391 8 +     20448 CTATGGTA
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563199 8 +  20919399 CTATGGTA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   5135 8 +     41871 CTATGGTA
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     8420 8 +     27711 CTATGGTA
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  8501 8 +      9205 CTATGGTA
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12145 2 -     78924 TT------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 15
s Perodicticus_ibeanus.k141_855320                            9766 8 +     13100 ctgctgtg
i Perodicticus_ibeanus.k141_855320                       I 237 C 0
s Perodicticus_potto.k141_1092580                             8172 8 +     25941 ctgctgtg
i Perodicticus_potto.k141_1092580                        I 241 C 0
s Peromyscus_maniculatus.KI615324.1                       18194387 2 -  18517816 GT------
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Piliocolobus_badius.k141_1234363                           43154 8 +     62158 CTACAGTA
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        37885 8 +     89929 CTACAGTA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            39301 8 +     51399 CTACAGTA
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14295539 8 -  14605196 CTACGGTA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1335 2 +     22620 CT------
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 3
s Pongo_abelii.CM009266.2                                189130636 8 + 189387572 CTATGGTA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570244 8 +   9816681 CTATGGTA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               72823 8 -     81375 CTATGGTA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              4643 8 +     19060 CTATGGTA
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 12833 2 -     22811 CT------
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 I 12
s Prolemur_simus.MPIZ01000396.1                            2596355 8 -   4620579 ACACTGTA
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990339 8 +   2598838 acactGTA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          28648 8 +     38485 ACACTGTA
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                               691 8 -     13098 ACACTGTA
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26169 8 +     35766 ACACTGTA
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4356 8 -     24134 ACACTGTA
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28181 8 -     67325 ACACTGTA
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4404 8 -      6182 ACACTGTA
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            10000 2 -     21651 GC------
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            14184 2 -     21811 CT------
i Pteronotus_parnellii.KE909381.1                        C 0 I 4
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39727 2 +     42204 TT------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 15
s Pteropus_alecto.KB030862.1                              22976274 2 +  28871421 CC------
i Pteropus_alecto.KB030862.1                             C 0 I 12
s Pteropus_vampyrus.KN525825.1                             1359360 2 +   4952924 CC------
i Pteropus_vampyrus.KN525825.1                           C 0 I 12
s Puma_concolor.QAVW01001104.1                            20273830 2 -  38429054 TT------
i Puma_concolor.QAVW01001104.1                           C 0 I 15
s Pygathrix_cinerea.k141_1153803                             14652 8 -     91421 CTATGGTA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7608772 8 +   7812017 CTATGGTA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             14624 8 -     72585 CTATGGTA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53570248 2 +  90668790 GC------
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             6339 8 -     11128 CTATGGTA
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91235694 8 - 195417433 CTATGGTA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7671344 8 +   7961872 CTATGGTA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87295 2 -     96226 CC------
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 12
s Saguinus_bicolor.k141_2619299                               7695 8 -      8359 CTGTGGCA
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_imperator.k141_2524406                             1661 8 +      2197 CTGTGGCA
i Saguinus_imperator.k141_2524406                        C 0 I 10
s Saguinus_inustus.k141_699149                               13073 8 +     13640 CTGTGGCA
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               7942 8 +      8564 CTGTGGCA
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209468791 8 + 209938924 CTGTGGCA
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 7500 8 -      9399 CTGTGGCA
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119950423 8 - 121099817 CTATGGTA
i Saimiri_boliviensis.NW_024100920.1                     C 0 I 10
s Saimiri_cassiquiarensis.k141_2188234                       22879 8 +     46362 CTATGGTA
i Saimiri_cassiquiarensis.k141_2188234                   C 0 I 10
s Saimiri_macrodon.k141_716185                               22974 8 +     45824 CTATGGTA
i Saimiri_macrodon.k141_716185                           C 0 I 10
s Saimiri_oerstedii.k141_1487881                             39602 8 -     64574 CTATGGTA
i Saimiri_oerstedii.k141_1487881                         C 0 I 10
s Saimiri_sciureus.k141_2278166                               2608 8 -     23631 CTATGGTA
i Saimiri_sciureus.k141_2278166                          C 0 I 10
s Saimiri_ustus.k141_1484609                                 22870 8 -     61129 CTATGGTA
i Saimiri_ustus.k141_1484609                             C 0 I 10
s Sapajus_apella.ctg103                                    5420194 8 -   5703754 CTATGGTA
i Sapajus_apella.ctg103                                  C 0 I 10
s Sapajus_macrocephalus.k141_351809                          55235 8 -     80660 CTATGGTA
i Sapajus_macrocephalus.k141_351809                      C 0 I 10
s Scalopus_aquaticus.ScaAqu_scaffold_662                    152662 2 -    313613 CT------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 4 I 12
s Semnopithecus_entellus.k141_11662                          19163 8 -     19888 CTATGGTA
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26366 8 +     39453 CTATGGTA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            6885 8 +     27826 CTATGGTA
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             6406 8 -     19483 CTATGGTA
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      6474 8 +      7198 CTATGGTA
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         14732 8 +     15514 CTATGGTA
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11520 2 -     12148 AT------
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               3292 2 +   1910179 CT------
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 10
s Sorex_araneus.JH798187.1                                13650539 2 -  18376816 TT------
i Sorex_araneus.JH798187.1                               C 0 I 12
s Spermophilus_dauricus.KZ294078.1                         1952755 2 -   3870691 AA------
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30227 2 +     97271 CT------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 15
s Suricata_suricatta.SurSur_flattened_line_6629              17812 2 -    196729 TT------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 15
s Sus_scrofa.CM000828.4                                    6809985 2 +  69701581 CT------
i Sus_scrofa.CM000828.4                                  C 0 I 2
s Symphalangus_syndactylus.tarseq_199                      1092951 8 -   1523678 CTATGGTA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 71619 2 +    116680 CT------
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 I 11
s Tapirus_indicus.TapInd_scaffold_9301                      118245 2 -    156842 CT------
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 12
s Tapirus_terrestris.TapTer_scaffold_755                    386698 2 +    539355 CT------
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 12
s Tarsius_lariang.k141_2201908                               25950 8 +     70052 TTATTGTA
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                 783 8 -     16117 CTATTGTA
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428063 8 + 186847797 CTATGGTA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   5472 2 +      8208 CA------
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 I 12
s Tonatia_saurophila.TonSau_scaffold_294                     80428 2 +    610378 CT------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 4
s Trachypithecus_auratus.k141_722599                         10457 8 -     20410 CTATGGTA
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    14651 8 +     15221 CTATGGTA
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                       10558 8 +     19930 CTATGGTA
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       6985 8 -     19997 CTATGGTA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            47109 8 -     60166 CTATGGTA
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        14580 8 -     27529 CTATGGTA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     14524 8 -     18194 CTATGGTA
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           8252 8 -     21137 CTATGGTA
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    6955 8 -     10723 CTATGGTA
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         6111 8 +      9834 CTATGGTA
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        24424 8 +     32220 CTATGGTA
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5938526 8 +   6242583 CTATGGTA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        7778 8 +     20839 CTATGGTA
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4292747 2 +  10818551 CT------
i Trichechus_manatus.JH594705.1                          C 0 I 12
s Tupaia_chinensis.KB320699.1                              2155181 2 +   4065304 GT------
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     8829 2 -     10553 GT------
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   52821 2 -     77625 CT------
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 12
s Ursus_maritimus.KK499267.1                               4849932 2 -   5085361 TT------
i Ursus_maritimus.KK499267.1                             C 0 I 15
s Varecia_rubra.k141_590885                                  11015 8 +     50397 ACACTGTA
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11074 8 +     24756 ACACTGTA
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371360 2 -   5488506 TT------
i Vicugna_pacos.KN270157.1                               C 0 I 12
s Vulpes_lagopus.VulLag_flattened_line_30954                 10282 2 -     43706 TT------
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 15
s Xerus_inauris.XerIna_scaffold_48378                        23954 2 -     24430 AA------
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          4653 2 +     86975 TT------
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 220
s Zapus_hudsonius.ZapHud_scaffold_11398                      14526 2 +     63895 TT------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937 0 +    114563 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                10012 0 +     41958 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813 0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50341 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352 0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276493 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547 0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084 0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Colobus_guereza.LG01                                   199948958 0 + 200372422 C
e Chinchilla_lanigera.JH722012.1                           1251498 0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157 0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    136758 0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6254 36 +     62944 GAGGGTG-G---------AAG-------------CAAT-TAAAGGGAGTC-C---CC-T-TCACAC
s Acinonyx_jubatus.LLWD01001279.1                           826840 23 -   1699592 -------------------GG-------------T-----AAAGTGAATC-C---CT-T-TTACAA
i Acinonyx_jubatus.LLWD01001279.1                        I 15 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     70424 30 +     87051 ------A-G---------AAG-------------CAAT-TCAAGTTAATC-C---TC-T-TTATGT
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 5
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510089 17 -  29979442 -------------------GG-------------CAAT-TAAAGTGAATC----------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 15 I 5
s Ailurus_fulgens.LNAC01001112.1                             78858 17 -    347723 -------------------GG-------------CAAT-TCAAGTGAATC----------------
i Ailurus_fulgens.LNAC01001112.1                         I 15 I 5
s Allactaga_bullata.AllBul_scaffold_9566                     74215 12 -     89534 ------A-G---------AAA-------------CAAT-TAA------------------------
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14182 36 -     52922 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         14118 36 -     28001 GAGGGTA-G---------AAA-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          4614 36 -     18505 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           5467 36 -     12518 GAGAGTG-G---------AAG-------------CAAT-TAAAGTGAGTT-C---CC-T-TCACAT
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                              2901 36 -     27731 GCGGGTG-G---------AAG-------------CAGT-AACAGCGAGCC-C---CC-T-TCACGT
i Alouatta_belzebul.k141_3238538                         C 0 C 0
s Alouatta_caraya.k141_1743867                                3032 36 +      3134 GCGGGTG-G---------AAG-------------CAGT-AACAGTGAGCC-C---CC-T-TCACGT
i Alouatta_caraya.k141_1743867                           C 0 C 0
s Alouatta_discolor.k141_743489                               3160 36 -     45847 GCGGGTG-G---------AAG-------------CAGT-AACAGCGAGCC-C---CC-T-TCACGT
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                24370 36 +     25266 GTGGGTG-G---------AAG-------------CAGT-AACAGCGAGCC-C---CC-T-TCACGT
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_918386                              95 36 -      9457 GCTGGTG-G---------AAG-------------CAGT-AACAGCGAGCC-C---CC-T-TCACGT
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_3472759                            17666 36 -     18578 GCTGGTG-G---------AAG-------------CAGT-AACAGCGAGCC-C---CC-T-TCACGT
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              3065 36 +     47717 GCGGGTG-G---------AAG-------------CAGT-ATCAGCGAGCC-C---CC-T-TCACGT
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             3165 36 -      3544 GCGGGTG-G---------AAG-------------CAGT-AACAGCGAGCC-C---CC-T-TCACGT
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             14389 36 +     50774 GTGGGTG-G---------AAG-------------CAGT-AACAGCGAGCC-C---CC-T-TCACGT
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184579 25 +    412891 ----------------------------------CAAT-TAAAGTAAATC-C---CT-T-TTACAT
i Anoura_caudifer.AnoCau_scaffold_1412                   I 4 C 0
s Aotus_azarae.k141_3104676                                  15009 36 -     33861 GAGGGTG-G---------AAG-------------CAAT-AAGAGTGAGCC-C---CC-T-TCACAT
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            15029 36 -     34016 GAGGGTG-G---------AAG-------------CAAA-AAGAGTGAGCC-C---CC-T-TCACAT
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297426 36 -   5030052 GAGGGTG-G---------AAG-------------CAAT-AAGAGTGAGCC-C---CC-T-TCACAT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             15031 36 -     34685 GAGGGTG-G---------AAG-------------CAAT-AAGAGTGAGCC-C---CC-T-TCACAT
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28155 36 -     47192 GAGGGTG-G---------AAG-------------CAAT-AAGAGTGAGCC-C---TC-T-TCACAT
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      11436 30 +     20879 ------G-G---------AAG-------------CAAT-TAAAGGGAATG-C---AC-T-TTGcac
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       11139 36 +     14667 aagggta-g---------aat-------------gaAT-TCAAGTGAATT-C---CC-T-CAATAT
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  3986 25 +     43469 ----------------------------------CAAT-TAAAGTAAATC-T---CT-T-TCACAT
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 4 C 0
s Avahi_laniger.k141_765380                                  53300 36 -     92717 GGGGGTA-G---------AAG-------------CAAT-TAAAGTAAATC-T---CC-T-TAATAT
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              53927 36 +     85213 GGGGGTA-G---------AAG-------------CAAT-TAAAGTAAATC-T---CC-T-TAATAT
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             4764 36 -     10423 GAGGGTG-G---------AAG-------------CAGT-AACAGCCAGCC-C---CC-T-TCACAT
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             24238 27 +     31915 GAGGGTG-G---------AAG-------------CAAT-AACAGCCAGCC-C--------------
i Callimico_goeldii.k141_1091182                         C 0 I 7
s Callithrix_geoffroyi.k119_512088                            4730 36 +      5267 GAGGGTG-G---------AAG-------------CAGT-AACAGCCAGCT-C---CC-T-TCACAT
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23589944 36 - 189096842 GAGGGTG-G---------AAG-------------CAGT-AACAGCCAGCC-C---CC-T-TCACAT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             11475 36 -     12001 GAGGGTG-G---------AAG-------------CAGT-AACAGCCAGCC-C---CC-T-TCACAT
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10001872 30 -  17673402 ------G-G---------AGG-------------CAAT-TAAAGTGAATc-c---tt-t-ttacat
i Camelus_bactrianus.KN276810.1                          I 12 C 0
s Camelus_dromedarius.KN272107.1                           2334330 30 -   7040546 ------G-G---------AGG-------------CAAT-TAAAGTGAATc-c---tt-t-ttacat
i Camelus_dromedarius.KN272107.1                         I 12 C 0
s Camelus_ferus.KB017975.1                                  402613 30 -   1652518 ------G-G---------AGG-------------CAAT-TAAAGTGAATc-c---tt-t-ttacat
i Camelus_ferus.KB017975.1                               I 12 C 0
s CanFam4.chr16                                           17798684 27 -  60362399 -------------------GA-------------CAAC-TAAAGTGAATC-C---CT-T-TTACAT
i CanFam4.chr16                                          I 15 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184741 27 -    185531 -------------------GA-------------CAAC-TAAAGTGAATC-C---CT-T-TTACAT
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 15 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034127 27 -   9314153 -------------------GA-------------CAAC-TAAAGTGAAtc-c---ct-t-ttacat
i Canis_lupus_dingo.QKWQ01000480.1                       I 15 C 0
s Canis_lupus_familiaris.chr16                            17958392 27 -  59632846 -------------------GA-------------CAAC-TAAAGTGAAtc-c---ct-t-ttacat
i Canis_lupus_familiaris.chr16                           I 15 C 0
s Canis_lupus_orion.HG994398.1                            18499904 27 +  63665305 -------------------GA-------------CAAC-TAAAGTGAAtc-c---ct-t-ttacat
i Canis_lupus_orion.HG994398.1                           I 15 C 0
s Carlito_syrichta.NW_007247396.1                           200939 36 +    308752 GAAGGtg-a---------cag-------------caat-taaaatgaagc-c---cc-t-ttgtat
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                4349 25 -     11696 ----------------------------------CCAT-TAAAGTAAATC-C---CT-T-TTACAT
i Carollia_perspicillata.CarPer_scaffold_92756           I 4 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     92494 40 +    217609 -------------------GGTAAAAGGTAGAGGCAAT-TAAACTGGGCC-C---TT-T-TAAAAT
i Catagonus_wagneri.CatWag_scaffold_2839                 I 2 C 0
s Cebuella_niveiventris.k141_1251222                          9389 36 -     11392 GAGGGTG-G---------AAG-------------CAGT-AACAGCCAGCC-C---CC-T-TCACAT
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               5487 36 -      7577 GAGGGTG-G---------AAG-------------CAGT-AACAGCCAGCC-C---CC-T-TCACAT
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25651541 13 +  26074798 ----------------------------------------------AGCC-C---C--T-TCACAT
i Cebus_albifrons.Contig27                               I 10 C 0
s Cebus_olivaceus.k141_398305                                 1117 13 +      1777 ----------------------------------------------AGCC-C---C--T-TCACAT
i Cebus_olivaceus.k141_398305                            I 10 C 0
s Cebus_unicolor.k141_544048                                 49454 13 -     74725 ----------------------------------------------AGCC-C---C--T-TCACAT
i Cebus_unicolor.k141_544048                             I 10 C 0
s Cephalopachus_bancanus.k141_1423433                         4946 35 +     31688 GAAGGTG-A---------CCG-------------CAAT-TAAAATGAAGC-C---CC-T-TTGCA-
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12230932 30 +  27778364 ------G-G---------AGG-------------CAAT-TAAAGTGAATA-C---CT-T-CTACAT
i Ceratotherium_simum.JH767749.1                         I 12 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1959 30 -     25243 ------G-G---------AGG-------------CAAT-TAAAGTGAATA-C---CT-T-CTACAT
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 12 C 0
s Cercocebus_atys.KQ010504.1                               4475131 36 +   4669795 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        13676 36 -     19203 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3342297                            292 36 -     14043 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           8328 36 +     27781 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         8489 36 -     20310 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          11468 36 +     29689 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            6226 36 -     20078 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          14147 36 -     27936 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            3013 36 -     17152 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38816548 36 +  39242232 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222242 36 -  21565898 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       39360 36 -     53127 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        6628 36 +      7159 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14163 36 -     27947 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         14136 36 +     17596 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                           185 36 +     14005 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_713168            1954 30 -      2554 ------A-G---------AAG-------------CAGT-TAAAGTGGATG-C---CT-T-TTACAT
i Chaetophractus_vellerosus.ChaVel_scaffold_713168       I 12 C 0
s Cheirogaleus_major.k141_333249                             20679 36 -     52598 GGGGGTA-G---------AAG-------------AAAT-TAAAATGAATC-T---CC-T-TAATAT
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16044 36 +     57038 GTGGGTA-G---------AAG-------------CAAT-TAAAATGAATC-T---CC-T-TAATAT
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                          10641 36 +     11226 GAAGGTG-G---------AAG-------------CAGT-AACAGCCAGCC-C---CC-T-TCACAT
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18428118 36 -  18827391 GAGGGTA-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCATAT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       14555 36 -     50209 GAGGGTA-G---------AAG-------------CAAT-TAAAATGAGTC-C---CC-T-TCACAT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135421555 36 + 135778131 GAGGGTA-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 17372 30 +     19366 ------G-C---------AGG-------------CAGT-TAAAGTCCATC-C---CC-T-TTACAT
i Choloepus_didactylus.ChoDid_scaffold_45914             I 11 C 0
s Choloepus_hoffmanni.KN194906.1                            172469 30 +    839153 ------G-G---------AGG-------------CAGT-TAAAGTCCATC-C---CC-T-TTACAT
i Choloepus_hoffmanni.KN194906.1                         I 11 C 0
s Colobus_angolensis.KN981557.1                            1910064 36 +   2368649 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_polykomos.k141_906115                              36602 36 +     84244 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17547604 25 -  53390261 --------A---------AGA-------------CAAC-TGAAGTGAATC-cccatt---------
i Condylura_cristata.JH655891.1                          I 12 I 5
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          13920 30 -     20389 ------G-G---------AGG-------------CAAT-GAAACTGAATC-C---CT-T-CTACAT
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 12 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 49686 31 +     63868 ------A-G---------AAG-------------CAATTTAAAGTTAAAC-C---TC-T-TTATGT
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 5
s Cricetulus_griseus.LT883664.1                           11667181 30 + 224834208 ------G-A---------AAG-------------CAAA-TAAAGTTAAAC-C---TA-T-TTATGT
i Cricetulus_griseus.LT883664.1                          C 0 I 5
s Crocidura_indochinensis.CroInd_scaffold_37019               2510 23 -     19598 ------G-T---------AGG-------------CAAT-TAAAGTTAATATG----C---------
i Crocidura_indochinensis.CroInd_scaffold_37019          I 12 I 5
s Cryptoprocta_ferox.CryFer_flattened_line_16129             27995 27 -     87169 -------------------AG-------------TAAT-TAAAGTGAATC-C---CT-T-TTATAC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 15 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    836684 30 +   1526836 ------T-G---------GAC-------------TGAT-CAAAGTGAATC-T---CC-C-TTACCC
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            62623 30 +   2246927 ------G-G---------AAG-------------CAGT-GAAATGTGATG-C---CC-T-TTACAT
i Dasypus_novemcinctus.JH564415.1                        I 12 C 0
s Daubentonia_madagascariensis.ctg71                      12536904 36 -  12879189 AAGGGTA-G---------AAG-------------CAAT-TAAAGTGAATC-T---CC-T-TCATAT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8629363 25 +  20541912 ----------------------------------CAAT-GAAAGTAAATC-C---CT-T-TTACAT
i Desmodus_rotundus.KZ672289.1                           I 4 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672783 30 +   1390856 ------G-G---------AGG-------------CAAT-TAAAGTGAATA-C---CT-T-CTACAT
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 12 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    5535 30 +    198055 ------G-G---------AGG-------------CAAT-TAAGGTGAATA-C---CT-T-CTACAT
i Diceros_bicornis.DicBicMic_scaffold_5955               I 12 C 0
s Echinops_telfairi.JH980293.1                            48779931 31 + 111700974 ------CCC---------AAT-------------CAAT-TACAGTAAATT-C---TC-T-TTACAT
i Echinops_telfairi.JH980293.1                           I 11 C 0
s Eidolon_helvum.KE759718.1                                  10031 30 +     11740 ------G-G---------AGA-------------CAAT-TAAAGTGAAtc-c---cc-t-ttttat
i Eidolon_helvum.KE759718.1                              I 12 C 0
s Elephantulus_edwardii.JH947257.1                         1097222 31 +  10337057 ------TGC---------TAG-------------CAAT-TACAGTGAATC-T---CC-T-TTACAT
i Elephantulus_edwardii.JH947257.1                       I 11 C 0
s Ellobius_lutescens.LOEQ01008920.1                          19934 18 -    110024 ------------------------------------------AGTTAACT-C---TC-T-TTATGT
i Ellobius_lutescens.LOEQ01008920.1                      I 3 I 5
s Ellobius_talpinus.LOJH01109367.1                            6022 18 -      6299 ------------------------------------------AGTTAACT-C---TC-T-TTATGT
i Ellobius_talpinus.LOJH01109367.1                       I 3 I 5
s Enhydra_lutris.KZ291758.1                               16328827 17 -  41312741 -------------------GG-------------CAAT-TAAAGTGAATC----------------
i Enhydra_lutris.KZ291758.1                              I 15 I 5
s Eptesicus_fuscus.JH977646.1                              2144947 25 -  14770903 ----------------------------------CAAT-TAAAGTAAAtc-c---ct-t-ttacat
i Eptesicus_fuscus.JH977646.1                            I 4 C 0
s Equus_asinus.JREZ01000139.1                              1283053 30 +   4378816 ------G-G---------AGG-------------CAAT-TAAAGTGAATC-C---CA-T-TTACAT
i Equus_asinus.JREZ01000139.1                            I 218 C 0
s Equus_caballus.CM000403.2                               18530873 30 -  39960074 ------G-G---------AGG-------------CAAT-TAAAGTGAATC-C---CA-T-TTACAT
i Equus_caballus.CM000403.2                              I 217 C 0
s Equus_przewalskii.KK951119.1                               32902 30 +    498745 ------G-G---------AGG-------------CAAT-TAAAGTGAATC-C---CA-T-TTACAT
i Equus_przewalskii.KK951119.1                           I 231 C 0
s Erythrocebus_patas.Contig38                             21204725 36 -  21539334 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CA-T-TCACAT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13404 36 -     14127 GGGGGTA-G---------AAG-------------CAAT-TAAAGTGAATA-T---CC-T-TAATAT
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6105 36 -     16928 GGGGGTA-G---------AAG-------------CAAT-TAAAATGAATA-T---CC-T-TAATAT
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15131 36 -     25546 GGGGGTA-G---------AAG-------------CAAT-TAAAGTGAATA-T---CC-T-TAATAT
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12340 36 +     26330 GGGGGTA-G---------AAG-------------CAAT-TAAGGTGAATA-T---CC-T-TAATAT
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 13568 36 +     23973 GGGGGTA-G---------AAG-------------CAAT-TAAAATGAATA-T---CC-T-TAATAT
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12337 36 +     75513 GGGGGTA-G---------AAG-------------CAAT-TAAGGTGAATA-T---CC-T-TAATAT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10263 36 +     97555 GGGGGTA-G---------AAG-------------CAAT-TAAAGTGAATA-T---CC-T-TAATAT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            13194 36 +     26496 GGGGGTA-G---------AAG-------------CAAT-TAAAGTGAATA-T---CC-T-TAATAT
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  3804 36 -     17153 GGGGGTA-G---------AAG-------------CAAT-TAAAGTGAATA-T---CC-T-TAATAT
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13379 36 +    111500 GGGGGTA-G---------AAG-------------CAAT-TAAAGTGAATA-T---CC-T-TAATAT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20236491 23 + 206538554 -------------------GG-------------T-----AAAGTGAATC-C---CT-T-TTACAA
i Felis_catus.CM001381.2                                 I 15 C 0
s Felis_catus_fca126.CM031415.1                           20195334 23 + 205367284 -------------------GG-------------T-----AAAGTGAATC-C---CT-T-TTACAA
i Felis_catus_fca126.CM031415.1                          I 15 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  8848 23 -     36744 -------------------GG-------------T-----AAAGTGAATC-C---CT-T-TTACAA
i Felis_nigripes.FelNig_flattened_line_20823             I 15 C 0
s Galago_moholi.ctg2040                                     426273 36 -    453645 gaGGGTA-A---------AAG-------------CAAT-TCAAGTGAATC-T---CC-T-TCATAT
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             3964 36 +     11339 GAGGGTA-A---------AAG-------------CAAT-TCAAGTGAATC-T---CC-T-TCATAT
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            1278 36 +     41679 gagggta-a---------aag-------------caat-tcaaGTGAATC-T---CC-T-TCATAT
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840                736 31 -      9135 ------G-G---------AAG-------------CAAT-TAAAGTGAATC-C---CCCT-TTACAT
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              15509 36 -     32273 GAGGGTG-G---------AAG-------------CAAT-TAAAGGGAGTC-C---CC-T-TCACAC
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186337655 36 + 186649187 GAGGGTG-G---------AAG-------------CAAT-TAAAGGGAGTC-C---CC-T-TCACAC
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6450 36 -     19426 GGGGGTA-G---------AAG-------------CAAT-TAAAGTGAATC-T---CC-T-TAATAT
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             11599 36 -     15286 GGGGGTA-G---------AAG-------------CAAT-TAAAGTGAATC-T---CC-T-TAATAT
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13238 36 +     18253 GGGGGTA-G---------AAG-------------CAAT-TAAAGTGAATC-T---CC-T-TAATAT
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13339 36 -     41752 GGGGGTA-G---------AAG-------------CAAT-TAAAGTGAATC-T---CC-T-TAATAT
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13176 36 -     16460 GGGGGTA-G---------AAG-------------CAAT-TAAAGTGAATC-T---CC-T-TAATAT
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               241830 27 +    327341 -------------------GG-------------TAAT-TAAAGTGAATC-C---CT-T-TTTCAC
i Helogale_parvula.HelPar_flattened_line_2585            I 15 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                 392 31 +      7595 ------C-T---------GGG-------------CAAT-CAAAGTGAACC-C---ACTT-TTATAT
i Heterohyrax_brucei.HetBruBak_scaffold_122365           I 12 C 0
s Hoolock_leuconedys.ctg274                                    434324 36 +    630532 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  44244 25 +     55795 -------------------GG-------------TAAT-T--AGTGAATC-C---CT-C-TTACAC
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 15 C 0
s Hylobates_agilis.k141_232023                                2090 36 -     12752 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAC
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                               2134 36 +     14092 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAC
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189542917 36 - 191637585 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAC
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3335812 36 -  11177569 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7519572 29 -   7955117 --------G---------AAG-------------CAAT-TAAAGTATATC-C---AC-T-TTGTAA
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   22121 36 +     31101 GGGGGTA-G---------GAG-------------CAAT-TAAAGTGAATC-T---CC-T-TAATAT
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8276493  3 -   9596543 ---------------------------------------------------------------TTG
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    13364 25 -     42476 ----------------------------------CAAT-TAAAGTAAATC-C---CT-T-TTACAT
i Lasiurus_borealis.LasBor_scaffold_32767                I 4 C 0
s Lemur_catta.scaffold_24                                 15523683 36 -  30322482 GGGGGTA-G---------AAG-------------CAAT-TAAAGTGAATC-T---CC-T-TAATAT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7027 36 +     64341 GAGGGAG-G---------AAG-------------CAAT-AACAGCCAGCC-C---CC-T-TCACAT
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           4351 36 +      4941 GAGGGAG-G---------AAG-------------CAAT-AACAGCCAGCC-C---CC-T-TCACAT
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        7069 36 +     35603 GAGGGAG-G---------AAG-------------CAAT-AACAGCCAGCC-C---CC-T-TCACAT
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    28539 36 +     38576 GAAGGCG-G---------AAG-------------CAAT-AACAGCCAGCC-C---CC-T-TCACAT
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         25236 36 +     66356 GAAGGCG-G---------AAG-------------CAAT-AACAGCCAGCC-C---CC-T-TCACAT
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         10581 36 -     23766 GGGGGTA-G---------AAA-------------CAAT-TAAAGTGAATC-T---CC-T-TAATAT
i Lepilemur_ankaranensis.k141_596936                     I 2 C 0
s Lepilemur_dorsalis.k141_577674                             28642 36 +     45836 GGGGGTA-G---------AAA-------------CAAT-TAAAGTGAATC-T---CC-T-TAATAT
i Lepilemur_dorsalis.k141_577674                         I 1 C 0
s Lepilemur_ruficaudatus.k141_121139                          1179 36 +     25010 GGGGGTA-G---------AAG-------------CAAT-TAAAGTGAATC-T---CC-T-TAGTAT
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      26578 36 +     54090 GGGGGTA-G---------AAA-------------CAAT-TAAAGTGAATC-T---CC-T-TAATAT
i Lepilemur_septentrionalis.k141_185316                  I 1 C 0
s Leptonychotes_weddellii.KB714746.1                       3042355 17 +   3914936 -------------------GG-------------CAAT-TAAAGTGAATC----------------
i Leptonychotes_weddellii.KB714746.1                     I 15 I 5
s Lepus_americanus.LepAme_scaffold_107385                     5760 30 -     14121 ------A-G---------AAG-------------CAAC-TAAAATGAATC-T---GA-G-TTACtt
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 256
s Lophocebus_aterrimus.ctg367                              1436678 36 +   1826925 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5521 36 +     11245 gagggtA-G---------AAT-------------CAAT-TCAAGTGAATC-C---CC-T-TCATAT
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004341 36 +   6120653 gagggta-g---------aAT-------------CAAT-TCAAGTGAATC-C---CT-T-TCATAT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4216831 31 -  43346337 ------C-T---------AGG-------------CAAT-CAAAGTGAATT-C---CCTT-TTACAT
i Loxodonta_africana.GL010049.1                          I 12 C 0
s Lycaon_pictus.CM007581.1                                17954632 27 -  59628241 -------------------GA-------------CAAC-TAAAGTGAatc-c---ct-t-tttcat
i Lycaon_pictus.CM007581.1                               I 15 C 0
s Macaca_arctoides.k141_2326796                               6488 36 +     40492 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59675747 36 +  60120075 GAGGGTG-A---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 12260 36 -     26193 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            80044 36 -    114318 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  5735 36 -     23192 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                15204 36 -     29190 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  23769 36 +     37952 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186838858 36 + 187317192 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25457421 36 -  25927173 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  79617 36 +     89720 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 6618 36 +     20474 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   6418 36 -     14993 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  329284 36 -    668171 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 4734 36 -     24072 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               25356 36 -     45290 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90128 30 +     94391 ------G-T---------AGG-------------CAAT-TAAAGTGAATC-T---CT-T-TTTTAT
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 12 C 0
s Mandrillus_leucophaeus.scaffold280                      23936951 36 -  24302211 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               351079 36 +    752769 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33101884 29 -  40650429 --------G---------AAG-------------CAAT-TAAAGTATATC-C---AC-T-TTGTAT
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         9835 30 -    207569 ------G-G---------AGG-------------CAAT-GAAAGTGAACT-C---CT-T-CTATAT
i Megaderma_lyra.MegLyr_scaffold_4542                    I 12 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              9544 17 +     13704 -------------------GG-------------CAAT-TAAAGTGAATC----------------
i Mellivora_capensis.MelCap_flattened_line_69365         I 15 I 5
s Meriones_unguiculatus.MerUng_scaffold_7390                 32363 30 +    140813 ------A-G---------AAG-------------CAAT-GAAAGTTAATC-C---AC-T-TTATGC
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 5
s Mesocricetus_auratus.KB708134.1                         12181859 30 -  29670104 ------T-A---------AAG-------------CAAT-TAAAGTTAACC-C---TC-T-TTATGT
i Mesocricetus_auratus.KB708134.1                        C 0 I 5
s Mico_argentatus.k141_1239457                                5304 36 -      7380 GAGGGTG-G---------AAG-------------CAGT-AACAGCCAGCC-C---CC-T-TCACAT
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               4377 36 +     18990 GAGGGTG-G---------AAG-------------CAGT-AACAGCCAGCC-C---CC-T-TCACAT
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      5316 36 -      7356 GAGGGTG-G---------AAG-------------CAGT-AACAGCCAGCC-C---CC-T-TCACAT
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18291101 36 -  93316391 GCGGGTA-G---------AAG-------------CGAT-TAAAGTGAATG-T---CC-T-TAATAT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    21659 31 -    145209 ------CCA---------AAG-------------CAAT-TATAGTCATTT-C---TT-T-TTACAT
i Microgale_talazaci.MicTal_scaffold_6613                I 11 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                14904 25 -     19307 ----------------------------------CAAT-GAAAGTAAACC-C---CT-T-TTACAT
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 4 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850140 25 +   8254450 ----------------------------------CAAT-TGAAGTAAATc-t---ct-t-ttacat
i Miniopterus_natalensis.LDJU01000034.1                  I 4 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             33817 25 +     64694 ----------------------------------CAAT-TGAAGTAAATC-T---CT-T-TTACAT
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 4 C 0
s Miopithecus_ogouensis.k141_534055                           8673 36 -     28506 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         5223 17 -      8324 -------------------GG-------------CAAT-TAAAGTGAATC----------------
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 15 I 5
s Mirza_zaza.k141_952172                                      8647 36 -     37649 GGGGGTA-G---------AAG-------------CAAT-TAAAGTGAATC-T---CT-T-TAATAT
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140847 25 -    366855 ----------------------------------CAAT-TAAAGTAAATC-C---CT-T-TCACAC
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 4 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   34942 14 +     37127 ----------------------------------------------AATC-C---CT-T-TTACAC
i Mungos_mungo.MunMun_flattened_line_23663               I 14 C 0
s Murina_feae.MurFea_scaffold_85699                           6011 25 +     14753 ----------------------------------CAAT-TAAAGTACATC-C---CT-T-TTAGAT
i Murina_feae.MurFea_scaffold_85699                      I 4 C 0
s Mus_caroli.LT608237.1                                   84360979 30 - 120012414 ------A-A---------AAG-------------CAAT-TAATGTTAACC-C---TC-T-TTATGT
i Mus_caroli.LT608237.1                                  C 0 I 5
s Mus_musculus.chr8                                       87649977 30 - 129401213 ------A-A---------AAG-------------CAAT-TAATGTTAACC-C---TC-T-TTATGT
i Mus_musculus.chr8                                      C 0 I 5
s Mus_pahari.LT608297.1                                   31354633 30 -  89631738 ------A-A---------AAG-------------CAAT-TAATGTTAACC-T---TC-T-TTATGT
i Mus_pahari.LT608297.1                                  C 0 I 5
s Mus_spretus.CM004101.1                                  90752038 30 - 130317789 ------A-A---------AAG-------------CAAT-TAATGTTAACC-C---TC-T-TTATGT
i Mus_spretus.CM004101.1                                 C 0 I 5
s Mustela_putorius.JH418006.1                               300728 17 -  14710649 -------------------GG-------------CAAT-TAAAGTGAATC----------------
i Mustela_putorius.JH418006.1                            I 15 I 5
s Myotis_brandtii.KE162005.1                                279184 15 -  10118263 ----------------------------------CAat-taaaataaatc----------------
i Myotis_brandtii.KE162005.1                             I 4 I 9
s Myotis_davidii.KB100139.1                                1586877 15 -   6019432 ----------------------------------CAat-taaaataaatc----------------
i Myotis_davidii.KB100139.1                              I 4 I 9
s Myotis_lucifugus.GL429869.1                              3902949 15 -   4330536 ----------------------------------CAAT-TAAAACAAATC----------------
i Myotis_lucifugus.GL429869.1                            I 4 I 9
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              188276 24 +    196477 -----------------------------------AGG-CAAAGTTGATC-C---CC-T-TGACAT
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 14 C 0
s Nannospalax_galili.KL204047.1                            2033471  6 -   3037898 ---------------------------------------CAAAGT---------------------
i Nannospalax_galili.KL204047.1                          I 5 I 9
s Nasalis_larvatus.k141_413338                               14656 35 +     21681 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACA-
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306477 17 +  31847680 -------------------GG-------------CAAT-TAAAGTGAATC----------------
i Neomonachus_schauinslandi.NINY01007730.1               I 15 I 5
s Nyctereutes_procyonoides.CAJHUB010000658.1               9148886 27 -   9404916 -------------------GA-------------CAAC-TAAAATGAAtc-c---ct-t-ttacat
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 15 C 0
s Nycticebus_bengalensis.LG01                            102579313 36 - 196305487 GAGGGTA-G---------AAT-------------CAAT-TCAAGTAGATC-C---CC-T-TCATAT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_771082                              1158 36 -      2667 gaggGTA-G---------AAT-------------CAAT-TCAAGTAGATC-C---CC-T-TCATAT
i Nycticebus_coucang.k141_771082                         C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749741 36 + 199412804 gagggtA-G---------AAT-------------CAAT-TCAAGTGGATC-C---CC-T-TCATAT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1362909 30 +   3988456 ------G-G---------AAG-------------CAAC-TAAAAtgaatc-t---tc-c-attttt
i Ochotona_princeps.JH802162.1                           C 0 I 338
s Odobenus_rosmarus.KB229312.1                              506162 17 -   2017862 -------------------GG-------------CAAT-TAAAGTGAATC----------------
i Odobenus_rosmarus.KB229312.1                           I 15 I 5
s Ondatra_zibethicus.OndZib_scaffold_46174                   24780 19 +     28053 ------------------------------------------AGTTAACT-C---TC-TTTTATGT
i Ondatra_zibethicus.OndZib_scaffold_46174               I 12 I 5
s Onychomys_torridus.OnyTor_scaffold_2986                    79768 23 +    102263 ------T-G---------AAG-------------CAAT-CAGAGTTAACC-C---TC---------
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 10
s Orycteropus_afer.OryAfe_flattened_line_144387               9344 30 -     18566 ------C-C---------AGG-------------TAAT-TATCGTGACTC-T---CC-T-TTTCAT
i Orycteropus_afer.OryAfe_flattened_line_144387          I 11 C 0
s Oryctolagus_cuniculus.CM000791.1                        67146589 30 + 174332312 ------A-G---------AAG-------------CAAC-TAAAATGAATC-T---GA-g-ttactt
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 308
s Otocyon_megalotis.JAEUCK010005147.1                       461854 27 -    559221 -------------------GA-------------CAAC-TAAAGTGAATc-c---ct-t-ttacat
i Otocyon_megalotis.JAEUCK010005147.1                    I 15 C 0
s Otolemur_crassicaudatus.k141_222918                         3806 36 +      8798 gagggta-a---------aag-------------caat-tCAAGTGAATC-T---CC-T-TCATAT
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             695971 36 -   1103335 GAGGGTA-A---------AAG-------------CAAT-TCAAGTGaatc-t---ct-t-tcatat
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    43602 36 +     80009 AAGGGTG-G---------AAG-------------CAAT-TAAAGGGAGTC-C---CC-T-TCACAC
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189142510 36 + 189151597 GAGGGTG-G---------AAG-------------CAAT-TAAAGGGAGTC-C---CC-T-TCACAC
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  150693 23 +    230217 -------------------GG-------------T-----AAAGTGAATC-T---CT-T-TTACAA
i Panthera_onca.PanOnc_flattened_line_3271               I 15 C 0
s Panthera_pardus.KV860321.1                                263899 23 +  18783137 -------------------GG-------------T-----AAAGTGAATC-C---CT-T-TTACAA
i Panthera_pardus.KV860321.1                             I 15 C 0
s Panthera_tigris.KE722367.1                               4720537 23 -   8748460 -------------------GG-------------T-----AAAGTGAGTC-C---CT-T-TTACAA
i Panthera_tigris.KE722367.1                             I 15 C 0
s Papio_anubis.CM001495.2                                183442701 36 + 183742232 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             6399 36 +     20448 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563207 36 +  20919399 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   5143 36 +     41871 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     8428 36 +     27711 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  8509 36 +      9205 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12162 27 -     78924 -------------------GG-------------TAAT-TGAAGTGAATC-C---CT-T-TTACAC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 15 C 0
s Perodicticus_ibeanus.k141_855320                            9774 36 +     13100 aagggta-g---------aat-------------caAT-TCGAGTGAATT-C---CC-T-CCATAT
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8180 36 +     25941 aagggta-g---------aat-------------caat-ttGAGTGAATT-C---CC-T-CCATAT
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18194389 30 -  18517816 ------T-G---------AAG-------------CAAT-CAAAGTTAACC-C---TC-T-TTATGT
i Peromyscus_maniculatus.KI615324.1                      C 0 I 5
s Piliocolobus_badius.k141_1234363                           43162 36 +     62158 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        37893 36 +     89929 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTT-C---CC-T-TCACAT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            39309 36 +     51399 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14295547 36 -  14605196 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1340 25 +     22620 ----------------------------------CAAT-TAAAGTAAATC-C---CT-T-TTACAT
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 3 C 0
s Pongo_abelii.CM009266.2                                189130644 36 + 189387572 GGGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570252 36 +   9816681 GGGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               72831 36 -     81375 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              4651 36 +     19060 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 12847 31 -     22811 ------C-T---------GGG-------------CAAT-CAAAGTGAACC-C---ACTT-TTATAT
i Procavia_capensis.ProCapCap_scaffold_85530             I 12 C 0
s Prolemur_simus.MPIZ01000396.1                            2596363 36 -   4620579 GGGGGTA-G---------AAG-------------CAAT-TAAAGTGAATC-T---Cc-t-taatat
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990347 36 +   2598838 GGGGGTA-G---------AAG-------------CAAT-TAAAGTGAATC-T---Cc-t-taatat
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          28656 36 +     38485 GGGGGTA-G---------AAG-------------CAAT-TAAAGTGAATC-T---CC-T-TAATAT
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                               699 36 -     13098 GGGGGTA-G---------AAG-------------CAAT-TAAAGTGAATC-T---CC-T-TAATAT
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26177 36 +     35766 GGGGGTA-G---------AAG-------------CAAT-TAAAGTGAATC-T---CC-T-TAATAT
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4364 36 -     24134 GGGGGTA-G---------AAG-------------CAAT-TAAAGTGAATC-T---CC-T-TAATAT
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28189 36 -     67325 GGGGGTA-G---------AAG-------------CAAT-TAAAGTGAATC-T---CC-T-TAATAT
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4412 36 -      6182 GGGGGTA-G---------AAG-------------CAAT-TAAAGTGAATC-T---CC-T-TAATAT
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            10002 30 -     21651 ------A-G---------AAG-------------CAAT-GAAAGTTAACC-C---AC-T-TTATGC
i Psammomys_obesus.NESX01036370.1                        C 0 I 5
s Pteronotus_parnellii.KE909381.1                            14190 25 -     21811 ----------------------------------CAAT-TAAAGTAAATC-C---GT-T-TTACAC
i Pteronotus_parnellii.KE909381.1                        I 4 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39744 17 +     42204 -------------------GG-------------CAAT-TAAAGTGAATC----------------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 15 I 5
s Pteropus_alecto.KB030862.1                              22976288 30 +  28871421 ------G-G---------AGG-------------CAAT-TAAAGTGaatc-c---ct-t-ttttat
i Pteropus_alecto.KB030862.1                             I 12 C 0
s Pteropus_vampyrus.KN525825.1                             1359374 30 +   4952924 ------G-G---------AGG-------------CAAT-TAAAGTGaatc-c---ct-t-ttttat
i Pteropus_vampyrus.KN525825.1                           I 12 C 0
s Puma_concolor.QAVW01001104.1                            20273847 23 -  38429054 -------------------GG-------------T-----AAAGTGAATC-C---CT-T-TTACAA
i Puma_concolor.QAVW01001104.1                           I 15 C 0
s Pygathrix_cinerea.k141_1153803                             14660 36 -     91421 GAGGGTG-G---------AAG-------------CAAT-TCAAGTGAGTC-C---CC-T-TCACAT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7608780 36 +   7812017 GAGGGTG-G---------AAG-------------CAAT-TCAAGTGAGTC-C---CC-T-TCACAT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             14632 36 -     72585 GAGGGTG-G---------AAG-------------CAAT-TCAAGTGAGTC-C---CC-T-TCACAT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53570250 30 +  90668790 ------A-A---------AAG-------------CAAT-TCAACTTAAAC-C---TC-A-CTATGT
i Rattus_norvegicus.chr16                                C 0 I 5
s Rhinopithecus_bieti.k119_217274                             6347 36 -     11128 GCGGGTG-G---------AAG-------------CAAT-GAAAGTGAGTC-C---CC-T-TCACAT
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91235702 36 - 195417433 GCGGGTG-G---------AAG-------------CAAT-GAAAGTGAGTC-C---CC-T-TCACAT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7671352 36 +   7961872 GCGGGTG-G---------AAG-------------CAAT-GAAAGTGAGTC-C---CC-T-TCACAT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87309 30 -     96226 ------G-G---------CAG-------------CAAT-TAAAGTGAATC-C---CT-T-TTCTAT
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 12 C 0
s Saguinus_bicolor.k141_2619299                               7703 36 -      8359 GAAGGTG-G---------AAG-------------CAGT-AACAGCCAGCC-C---CC-T-TCACAT
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_imperator.k141_2524406                             1679 19 +      2197 -----------------------------------------CAGCCAGCC-G---CC-T-TCACAT
i Saguinus_imperator.k141_2524406                        I 10 C 0
s Saguinus_inustus.k141_699149                               13081 36 +     13640 GAGGGTG-G---------AAG-------------CAGT-AACAGCCAGCC-C---CC-T-TCACAT
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               7950 36 +      8564 GAGGGTG-G---------AAG-------------CAGT-AACAGCCAGCC-C---CC-T-TCACAT
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209468799 36 + 209938924 GAGGGTG-G---------AAG-------------CAGT-AACAGCCAGCC-C---CC-T-TCACAT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 7508 36 -      9399 GAGGGTG-G---------AAG-------------CAGT-AACAGCCAGCC-C---CC-T-TCACAT
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119950441 14 - 121099817 ----------------------------------------------AACC-C---CC-T-TCACAT
i Saimiri_boliviensis.NW_024100920.1                     I 10 C 0
s Saimiri_cassiquiarensis.k141_2188234                       22897 14 +     46362 ----------------------------------------------AACC-C---CC-T-TCACAT
i Saimiri_cassiquiarensis.k141_2188234                   I 10 C 0
s Saimiri_macrodon.k141_716185                               22992 14 +     45824 ----------------------------------------------AACC-C---CC-T-TCACAT
i Saimiri_macrodon.k141_716185                           I 10 C 0
s Saimiri_oerstedii.k141_1487881                             39620 14 -     64574 ----------------------------------------------AACC-C---CC-T-TCACAT
i Saimiri_oerstedii.k141_1487881                         I 10 C 0
s Saimiri_sciureus.k141_2278166                               2626 14 -     23631 ----------------------------------------------AACC-C---CC-T-TCACAT
i Saimiri_sciureus.k141_2278166                          I 10 C 0
s Saimiri_ustus.k141_1484609                                 22888 14 -     61129 ----------------------------------------------AACC-C---CC-T-TCACAT
i Saimiri_ustus.k141_1484609                             I 10 C 0
s Sapajus_apella.ctg103                                    5420212 13 -   5703754 ----------------------------------------------AGCC-C---C--T-TCACAT
i Sapajus_apella.ctg103                                  I 10 C 0
s Sapajus_macrocephalus.k141_351809                          55253 13 -     80660 ----------------------------------------------AGCC-C---C--T-TCACAT
i Sapajus_macrocephalus.k141_351809                      I 10 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    152676 26 -    313613 ------G-A---------AGA-------------CAAC-TGAAGAGAATC-CCTATT---------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 12 I 5
s Semnopithecus_entellus.k141_11662                          19171 36 -     19888 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTT-C---CC-T-TCACAT
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26374 36 +     39453 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTT-C---CC-T-TCACAT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            6893 36 +     27826 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTT-C---CC-T-TCACAT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             6414 36 -     19483 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTT-C---CC-T-TCACAT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      6482 36 +      7198 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTT-C---CC-T-TCACAT
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         14740 36 +     15514 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTT-C---CC-T-TCACAT
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11522 14 -     12148 ------T-G---------AAG-------------CAAT-TAAGG----------------------
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 I 6
s Solenodon_paradoxus.SolPar_flattened_line_126               3304 23 +   1910179 ------G-A---------AGG-------------CAAT-GAAGGTGAGTG-C---TT---------
i Solenodon_paradoxus.SolPar_flattened_line_126          I 10 I 5
s Sorex_araneus.JH798187.1                                13650553 24 -  18376816 ------A-G---------AGG-------------AAAT-TAAAGTGCATACC---TT---------
i Sorex_araneus.JH798187.1                               I 12 I 5
s Spermophilus_dauricus.KZ294078.1                         1952757 29 -   3870691 --------G---------AAG-------------CAAT-TAAAGTATATC-C---AC-T-TTGTAA
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30244 17 +     97271 -------------------GG-------------CAAC-TAAAGTGAATC----------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 15 I 5
s Suricata_suricatta.SurSur_flattened_line_6629              17829 27 -    196729 -------------------GG-------------TAAT-TAAAGTGAATC-C---CT-T-TTTCAC
i Suricata_suricatta.SurSur_flattened_line_6629          I 15 C 0
s Sus_scrofa.CM000828.4                                    6809989 40 +  69701581 -------------------AGTAAGAGGTAAAGGCAAT-TAAAGTGGACC-C---TA-T-TAAAAT
i Sus_scrofa.CM000828.4                                  I 2 C 0
s Symphalangus_syndactylus.tarseq_199                      1092959 36 -   1523678 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTT-C---CC-T-TCACAC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                10012 15 +     41958 ---------------------------------------------AAATC-T---CT-T-TTACAT
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 71632 27 +    116680 ------G-G---------A----------------AGG-CAAAGTTGATT-C---CC-T-TGACAT
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 11 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118259 26 -    156842 ------G-G---------AGA-------------CA-----AAATGAATC-C---CT-T-TTACAT
i Tapirus_indicus.TapInd_scaffold_9301                   I 12 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    386712 30 +    539355 ------G-G---------AGA-------------CAAT-TAAAGTGAATC-C---CT-T-TTACAT
i Tapirus_terrestris.TapTer_scaffold_755                 I 12 C 0
s Tarsius_lariang.k141_2201908                               25958 36 +     70052 GAGGGTG-A---------AAG-------------CAAT-TAAAATGAAGC-C---CC-T-TTGCAT
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                 791 36 -     16117 GAGGGTG-A---------AAG-------------CAAT-TAAAATGAAGC-C---CC-T-TTGCAT
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428071 36 + 186847797 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTC-C---CC-T-TCACAT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   5486 30 +      8208 ------A-G---------AAG-------------CAGT-TAAAGTGGATG-C---CT-T-TTACAT
i Tolypeutes_matacus.TolMat_scaffold_228639              I 12 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     80434 25 +    610378 ----------------------------------CAAT-TAAAGTAAATC-C---CT-T-TTACAT
i Tonatia_saurophila.TonSau_scaffold_294                 I 4 C 0
s Trachypithecus_auratus.k141_722599                         10465 36 -     20410 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTT-C---CC-T-TCACAT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    14659 36 +     15221 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTT-C---CC-T-TCACAT
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                       10566 36 +     19930 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTT-C---CC-T-TCACAT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       6993 36 -     19997 GAGGGTG-G---------AAG-------------CAAT-GAAAGTGAGTT-C---CC-T-TCACAT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            47117 36 -     60166 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTT-C---CC-T-TCACAT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        14588 36 -     27529 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTT-C---CC-T-TCACAT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     14532 36 -     18194 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTT-C---CC-T-TCACAT
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           8260 36 -     21137 GAGGGTG-G---------AAG-------------CAAT-GAAAGTAAGTT-C---CC-T-TCACAT
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    6963 36 -     10723 GAGGGTG-G---------AAG-------------CAAT-GAAAGTGAGTT-C---CC-T-TCACAT
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         6119 36 +      9834 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTT-C---CC-T-TCACAT
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        24432 36 +     32220 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTT-C---CC-T-TCACAT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5938534 36 +   6242583 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTT-C---CC-T-TCACAT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        7786 36 +     20839 GAGGGTG-G---------AAG-------------CAAT-TAAAGTGAGTT-C---CC-T-TCACAT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4292761 31 +  10818551 ------C-C---------AGG-------------CAAT-CAAAAAGAATG-C---CCTT-TTACAT
i Trichechus_manatus.JH594705.1                          I 12 C 0
s Tupaia_chinensis.KB320699.1                              2155183 28 +   4065304 ------G-G---------AAG-------------CAAT-GCAAGTG--TC-C---CC-T-TTACGT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     8831 28 -     10553 ------G-G---------AAG-------------CAAT-GCAAGCG--TC-C---CC-T-TTACGT
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   52835 26 -     77625 ------G-A---------AGG-------------CAAT-TGAAGTGAATC-TCCATT---------
i Uropsilus_gracilis.UroGra_scaffold_12083               I 12 I 5
s Ursus_maritimus.KK499267.1                               4849949 17 -   5085361 -------------------GG-------------CAAT-TAAAGTGAATC----------------
i Ursus_maritimus.KK499267.1                             I 15 I 5
s Varecia_rubra.k141_590885                                  11023 36 +     50397 GGGGGTA-G---------ATG-------------CAAT-TCAAGTGAATC-T---CC-T-TAATAT
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11082 36 +     24756 GGGGGTA-G---------ATG-------------CAAT-TAAAGTGAATC-T---CC-T-TAATAT
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371374 30 -   5488506 ------G-G---------AGG-------------CAAT-TAAAGTGAATA-C---TT-T-TTACAT
i Vicugna_pacos.KN270157.1                               I 12 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10299 27 -     43706 -------------------GA-------------CAAC-TAAAGTGAATC-C---CT-T-TTACAT
i Vulpes_lagopus.VulLag_flattened_line_30954             I 15 C 0
s Xerus_inauris.XerIna_scaffold_48378                        23956 29 -     24430 --------G---------AAA-------------CAAT-CAAAGTGAATC-C---AC-T-TTGCAC
i Xerus_inauris.XerIna_scaffold_48378                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          4875 17 +     86975 -------------------GG-------------CAAT-TAAAGTGAATC----------------
i Zalophus_californianus.ZalCal_flattened_line_17732     I 220 I 5
s Zapus_hudsonius.ZapHud_scaffold_11398                      14528 13 +     63895 ------A-G---------AAA-------------CAAAGTAA------------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 18
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50341  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352  0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Colobus_guereza.LG01                                   199948958  0 + 200372422 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    136758  0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6290 12 +     62944 TTTT-G-----T--TGC--------TTG
s Acinonyx_jubatus.LLWD01001279.1                           826863 12 -   1699592 Ttct-a-----t--tat--------ttg
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     70459  7 +     87051 -----------T--CAC--------TTG
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 5 I 7
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510111 12 -  29979442 TTCT-A-----T--GAC--------TTG
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 5 C 0
s Ailurus_fulgens.LNAC01001112.1                             78880 12 -    347723 TTCT-A-----T--GAC--------CTA
i Ailurus_fulgens.LNAC01001112.1                         I 5 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     74227  1 -     89534 ---------------------------A
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14218 12 -     52922 TTTT-G-----T--TGC--------TTG
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         14154 12 -     28001 TTTT-G-----T--TGC--------TTG
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          4650 12 -     18505 TTTT-G-----T--TGC--------TTG
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           5503 12 -     12518 TTTT-G-----T--TGC--------TTG
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3238538                              2937 12 -     27731 TTCT-G-----T--TGC--------TTG
i Alouatta_belzebul.k141_3238538                         C 0 N 0
s Alouatta_caraya.k141_1743867                                3068 12 +      3134 TTCT-G-----T--TGC--------TTG
i Alouatta_caraya.k141_1743867                           C 0 N 0
s Alouatta_discolor.k141_743489                               3196 12 -     45847 TTCT-G-----T--TGC--------TTG
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                24406 12 +     25266 TTCT-G-----T--TGC--------TTG
i Alouatta_juara.k141_1509701                            C 0 I 38
s Alouatta_macconnelli.k141_918386                             131 12 -      9457 TTCT-G-----T--TGC--------TTG
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_3472759                            17702 12 -     18578 TTCT-G-----T--TGC--------TTG
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              3101 12 +     47717 TTCT-G-----T--TGC--------TTG
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             3201 12 -      3544 TTCT-G-----T--TGC--------TTG
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             14425 12 +     50774 TTCT-G-----T--TGC--------TTG
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184604 12 +    412891 TTCT-G-----T--CAC--------TGG
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  15045 12 -     33861 TTCT-G-----T--TGC--------TTG
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            15065 12 -     34016 TTCT-G-----T--TGC--------TTG
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297462 12 -   5030052 TTCT-G-----T--TGC--------TTG
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             15067 12 -     34685 TTCT-G-----T--TGC--------TTG
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28191 12 -     47192 TTCT-G-----T--TGC--------TTG
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      11466  1 +     20879 -------------------------t--
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 751
s Arctocebus_calabarensis.k141_2318572                       11175 12 +     14667 TTTT-G-----T--TAT--------TTG
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4011 12 +     43469 TTCT-G-----T--CAC--------TGG
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  53336 12 -     92717 TTTT-G-----T--TAC--------TTG
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              53963 12 +     85213 TTTT-G-----T--TAC--------TTG
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             4800 12 -     10423 TTCT-G-----T--TGC--------TTG
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             24272 12 +     31915 TGCT-G-----T--TGC--------TTG
i Callimico_goeldii.k141_1091182                         I 7 C 0
s Callithrix_geoffroyi.k119_512088                            4766 12 +      5267 TTCT-G-----T--TGC--------TTG
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23589980 12 - 189096842 TTCT-G-----T--TGC--------TTG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             11511 12 -     12001 TTCT-G-----T--TGC--------TTG
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10001902 11 -  17673402 ttct-a-----t--tac--------tt-
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334360 11 -   7040546 ttct-a-----t--tac--------tt-
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  402643 11 -   1652518 ttct-a-----t--tac--------tt-
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17798711 12 -  60362399 TTTA-A-----T--GAT--------TTG
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184768 12 -    185531 TTTA-A-----T--GAT--------TTG
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034154 12 -   9314153 ttta-a-----t--gat--------ttg
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17958419 12 -  59632846 ttta-a-----t--gat--------ttg
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18499931 12 +  63665305 ttta-a-----t--gat--------ttg
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007247396.1                           200975 17 +    308752 tttt-tgcattt--tcc--------ttG
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                4374 12 -     11696 TTCT-G-----T--CAC--------TGG
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     92534 12 +    217609 TTCT-A-----T--TAC--------TTA
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          9425 12 -     11392 TTCT-G-----T--TGC--------TTG
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               5523 12 -      7577 TTCT-G-----T--TGC--------TTG
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25651554 12 +  26074798 TTCT-G-----T--TGC--------TTG
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_398305                                 1130 12 +      1777 TTCT-G-----T--TGC--------TTG
i Cebus_olivaceus.k141_398305                            C 0 C 0
s Cebus_unicolor.k141_544048                                 49467 12 -     74725 TTCT-G-----T--TGC--------TTG
i Cebus_unicolor.k141_544048                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         4981 17 +     31688 TTTT-TGCATTT--TCC--------TTG
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12230962 12 +  27778364 TCCT-A-----T--TCC--------TTG
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           1989 12 -     25243 TCCT-A-----T--TCC--------TTG
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4475167 12 +   4669795 TTTT-G-----T--TGC--------TTG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        13712 12 -     19203 TTTT-G-----T--TGC--------TTG
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3342297                            328 12 -     14043 TTTT-G-----T--TGC--------TTG
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           8364 12 +     27781 TTTT-G-----T--TGC--------TTG
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         8525 12 -     20310 TTTT-G-----T--TGC--------TTG
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          11504 12 +     29689 TTTT-G-----T--TGC--------TTG
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            6262 12 -     20078 TTTT-G-----T--TGC--------TTG
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          14183 12 -     27936 TTTT-G-----T--TGC--------TTG
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            3049 12 -     17152 TTTT-G-----T--TGC--------TTG
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38816584 12 +  39242232 TTTT-G-----T--TGC--------TTG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222278 12 -  21565898 TTTT-G-----T--TGC--------TTG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       39396 12 -     53127 TTTT-G-----T--TGC--------TTG
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        6664 12 +      7159 TTTT-G-----T--TGC--------TTG
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14199 12 -     27947 TTTT-G-----T--TGC--------TTG
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         14172 12 +     17596 TTTT-G-----T--TGC--------TTG
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                           221 12 +     14005 TTTT-G-----T--TGC--------TTG
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_713168            1984 12 -      2554 CTCC-A-----T--TAC--------TTA
i Chaetophractus_vellerosus.ChaVel_scaffold_713168       C 0 C 0
s Cheirogaleus_major.k141_333249                             20715 12 -     52598 TGTT-G-----T--TAC--------TTG
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16080 12 +     57038 TATT-G-----T--TAC--------TTG
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                          10677 12 +     11226 TTCT-G-----T--TGC--------TTC
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18428154 12 -  18827391 TTTT-G-----T--TGC--------TTG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       14591 12 -     50209 TTTT-G-----T--TGC--------TTG
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135421591 12 + 135778131 TTTT-G-----T--TGC--------TTG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 17402 12 +     19366 TTCT-A-----T--TAC--------TTA
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            172499 12 +    839153 TTCT-A-----T--TAC--------TTA
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1910100 12 +   2368649 TTTT-G-----T--TGC--------TTG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_polykomos.k141_906115                              36638 12 +     84244 TTTT-G-----T--TGC--------TTG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17547634 12 -  53390261 ttct-t-----t--tac--------ttg
i Condylura_cristata.JH655891.1                          I 5 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          13950 12 -     20389 TTCT-A-----T--TAT--------TTG
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 49722  7 +     63868 -----------T--CAT--------TTG
i Cricetomys_gambianus.CriGam_scaffold_18520             I 5 I 6
s Cricetulus_griseus.LT883664.1                           11667216  7 + 224834208 -----------T--TAC--------TTG
i Cricetulus_griseus.LT883664.1                          I 5 I 6
s Crocidura_indochinensis.CroInd_scaffold_37019               2538 12 -     19598 GTTT-A-----T--TAT--------TTC
i Crocidura_indochinensis.CroInd_scaffold_37019          I 5 I 7
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28022 12 -     87169 TTCT-A-----T--CAT--------TTG
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    836714 12 +   1526836 -----------T--TTT---ATTAATTG
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            62653 12 +   2246927 TTCT-A-----T--TAC--------TTA
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12536940 12 -  12879189 TTAT-G-----T--TAC--------TTG
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8629388 12 +  20541912 TTCT-G-----T--CCC--------TGG
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672813 12 +   1390856 TCCT-A-----T--TAC--------TTG
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    5565 12 +    198055 TCCT-A-----T--TCC--------TTG
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Echinops_telfairi.JH980293.1                            48779962 12 + 111700974 TTAC-A-----T--GAT--------GTG
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.KE759718.1                                  10061 12 +     11740 ttct-a-----t--tac--------ttg
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1097253 12 +  10337057 TTCT-A-----T--TAC--------CTG
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          19957  7 -    110024 -----------T--CAC--------TTG
i Ellobius_lutescens.LOEQ01008920.1                      I 5 I 6
s Ellobius_talpinus.LOJH01109367.1                            6045  7 -      6299 -----------T--CAc--------ttg
i Ellobius_talpinus.LOJH01109367.1                       I 5 I 6
s Enhydra_lutris.KZ291758.1                               16328849 12 -  41312741 TTCT-A-----T--GAC--------TTG
i Enhydra_lutris.KZ291758.1                              I 5 C 0
s Eptesicus_fuscus.JH977646.1                              2144972 12 -  14770903 ttct-t-----t--tac--------tGG
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1283083 12 +   4378816 TTCT-A-----t--tac--------ttg
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18530903 12 -  39960074 TTCT-A-----t--tac--------ttg
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               32932 12 +    498745 TTCT-A-----t--tac--------ttg
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21204761 12 -  21539334 TTTT-G-----T--TGC--------TTG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13440 12 -     14127 TATT-G-----T--TAC--------TGG
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6141 12 -     16928 TATT-G-----T--TAC--------TGG
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15167 12 -     25546 TATT-G-----T--TAC--------TGG
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12376 12 +     26330 TATT-G-----T--TAC--------TGG
i Eulemur_flavifrons.k141_1184614                        C 0 I 6
s Eulemur_fulvus.k141_544389                                 13604 12 +     23973 TATT-G-----T--TAC--------TGG
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12373 12 +     75513 TATT-G-----T--TAC--------TGG
i Eulemur_macaco.k141_1562045                            C 0 I 6
s Eulemur_mongoz.k141_232305                                 10299 12 +     97555 TATT-G-----T--TAC--------TGG
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            13230 12 +     26496 TATT-G-----T--TAC--------TGG
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  3840 12 -     17153 TATT-G-----T--TAC--------TGG
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13415 12 +    111500 TATT-G-----T--TAC--------TTG
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20236514 12 + 206538554 Ttct-a-----t--tat--------ttg
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195357 12 + 205367284 Ttct-a-----t--tat--------ttg
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  8871 12 -     36744 TTCT-A-----T--TAT--------TTG
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     426309 12 -    453645 TTTT-G-----T--TAT--------TTG
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4000 12 +     11339 TTTT-G-----T--TAT--------TTG
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            1314 12 +     41679 TTTT-G-----T--TAT--------TTG
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840                767 12 -      9135 TTTT-G-----T--TAC--------TTG
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              15545 12 -     32273 TTTT-G-----T--TGC--------TTG
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186337691 12 + 186649187 TTTT-G-----T--TGC--------TTG
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6486 12 -     19426 TTTT-G-----T--TAC--------TGG
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             11635 12 -     15286 TTTT-G-----T--TAC--------TGG
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13274 12 +     18253 TTTT-G-----T--TAC--------TGG
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13375 12 -     41752 TTTT-G-----T--TAC--------TGG
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13212 12 -     16460 TTTT-G-----T--TAC--------TGG
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               241857 12 +    327341 TTAT-A-----T--CAT--------TTG
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                 423 12 +      7595 CTCT-G-----G--GAC--------TTG
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hoolock_leuconedys.ctg274                                    434360 12 +    630532 TTTT-G-----T--TGC--------TTG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  44269 12 +     55795 TTCT-A-----T--CAT--------TTG
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_232023                                2126 12 -     12752 TTTT-G-----T--TGC--------TTG
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                               2170 12 +     14092 TTTT-G-----T--TGC--------TTG
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189542953 12 - 191637585 TTTT-G-----T--TGC--------TTG
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3335848 12 -  11177569 TTTT-G-----T--TGC--------TTG
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7519601 13 -   7955117 -----------T--TATGTCACTCTT--
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 903
s Indri_indri.k141_3655594                                   22157 12 +     31101 TTTT-G-----T--TAC--------TTG
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8276496  7 -   9596543 -----------T--TAT--------TTG
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    13389 12 -     42476 TTCT-G-----T--TAC--------TGG
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15523719 12 -  30322482 TTTT-G-----T--TAC--------TGG
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7063 12 +     64341 TTCT-G-----C--TGC--------TTG
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           4387 12 +      4941 TTCT-G-----T--TGC--------TTG
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        7105 12 +     35603 TTCT-G-----T--TGC--------TTG
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    28575 12 +     38576 TGCT-G-----T--TGC--------TCG
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         25272 12 +     66356 TGCT-G-----T--TGC--------TCG
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         10617 12 -     23766 TATT-G-----T--TAT--------TTG
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             28678 12 +     45836 TATT-G-----T--TAT--------TTG
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1215 12 +     25010 TATT-G-----T--TAG--------TTA
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      26614 12 +     54090 TATT-G-----T--TAT--------TTG
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3042377 12 +   3914936 TTCT-A-----T--GAC--------TTG
i Leptonychotes_weddellii.KB714746.1                     I 5 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6046 12 -     14121 ATTT-T-----T--CCC--------TAG
i Lepus_americanus.LepAme_scaffold_107385                I 256 C 0
s Lophocebus_aterrimus.ctg367                              1436714 12 +   1826925 TTTT-G-----T--TGC--------TTG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5557 12 +     11245 TTTT-G-----T--TAT--------TTG
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004377 12 +   6120653 TTTT-G-----T--TAT--------TTG
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4216862 12 -  43346337 TTCT-A-----T--TAC--------CTG
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17954659 12 -  59628241 ttta-a-----t--gat--------ttg
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               6524 12 +     40492 TTTT-G-----T--TGC--------TTG
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59675783 12 +  60120075 TTTT-G-----T--TGC--------TTG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 12296 12 -     26193 TTTT-G-----T--TGC--------TTG
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            80080 12 -    114318 TTTT-G-----T--TGC--------TTG
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  5771 12 -     23192 TTTT-G-----T--TGC--------TTG
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                15240 12 -     29190 TTTT-G-----T--TGC--------TTG
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  23805 12 +     37952 TTTT-G-----T--TGC--------TTG
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186838894 12 + 187317192 TTTT-G-----T--TGC--------TTG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25457457 12 -  25927173 TTTT-G-----T--TGC--------TTG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  79653 12 +     89720 TTTT-G-----T--TGC--------TTG
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 6654 12 +     20474 TTTT-G-----T--TGC--------TTG
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   6454 12 -     14993 TTTT-G-----T--TGC--------TTG
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  329320 12 -    668171 TTTT-G-----T--TGC--------TTG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 4770 12 -     24072 TTTT-G-----T--TGC--------TTG
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               25392 12 -     45290 TTTT-G-----T--TGC--------TTG
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90158 12 +     94391 TTCT-A-----T--TAC--------TGG
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23936987 12 -  24302211 TTTT-G-----T--TGC--------TTG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               351115 12 +    752769 TTTT-G-----T--TGC--------TTG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33101913 13 -  40650429 -----------T--TATGTCATTCTT--
i Marmota_marmota.CZRN01000018.1                         C 0 I 775
s Megaderma_lyra.MegLyr_scaffold_4542                         9865 12 -    207569 TTCT-A-----T--TAC--------TTG
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              9566 12 +     13704 TTCT-A-----T--GAC--------TTG
i Mellivora_capensis.MelCap_flattened_line_69365         I 5 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 32398  7 +    140813 -----------T--CAC--------TTG
i Meriones_unguiculatus.MerUng_scaffold_7390             I 5 I 16
s Mesocricetus_auratus.KB708134.1                         12181894  7 -  29670104 -----------T--CAC--------TTG
i Mesocricetus_auratus.KB708134.1                        I 5 I 6
s Mico_argentatus.k141_1239457                                5340 12 -      7380 TTCT-G-----T--TGC--------TTG
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               4413 12 +     18990 TTCT-G-----T--TGC--------TTG
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      5352 12 -      7356 TTCT-G-----T--TGC--------TTG
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18291137 12 -  93316391 TATT-G-----T--TAC--------TTG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    21690 12 -    145209 TGAC-A-----T--CAT--------TTG
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                14929 12 -     19307 TGCT-G-----T--CGC--------TGG
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850165 12 +   8254450 ttct-a-----t--taC--------TTG
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             33842 12 +     64694 TTCT-A-----T--TAC--------TTG
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           8709 12 -     28506 TTTT-G-----T--TGC--------TTG
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         5245 12 -      8324 GTCT-A-----T--GAC--------TTG
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 5 C 0
s Mirza_zaza.k141_952172                                      8683 12 -     37649 TATT-G-----T--TAC--------TTG
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140872 12 -    366855 TTCT-G-----T--CAT--------CGG
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   34956 12 +     37127 TTGT-A-----T--CAT--------TTG
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           6036 12 +     14753 TTCT-A-----T--TAG--------TGA
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84361014  7 - 120012414 -----------T--CCC--------TTG
i Mus_caroli.LT608237.1                                  I 5 I 6
s Mus_musculus.chr8                                       87650012  7 - 129401213 -----------T--CCC--------TTG
i Mus_musculus.chr8                                      I 5 I 6
s Mus_pahari.LT608297.1                                   31354668  7 -  89631738 -----------T--CCC--------TTG
i Mus_pahari.LT608297.1                                  I 5 I 6
s Mus_spretus.CM004101.1                                  90752073  7 - 130317789 -----------T--CCC--------TTG
i Mus_spretus.CM004101.1                                 I 5 I 6
s Mustela_putorius.JH418006.1                               300750 12 -  14710649 TCCT-A-----T--GAC--------TTG
i Mustela_putorius.JH418006.1                            I 5 C 0
s Myotis_brandtii.KE162005.1                                279208 12 -  10118263 ttat-a-----t--tac--------tGG
i Myotis_brandtii.KE162005.1                             I 9 C 0
s Myotis_davidii.KB100139.1                                1586901 12 -   6019432 TTCT-A-----T--TAC--------TGG
i Myotis_davidii.KB100139.1                              I 9 C 0
s Myotis_lucifugus.GL429869.1                              3902973 12 -   4330536 TTCT-A-----T--TAC--------TGG
i Myotis_lucifugus.GL429869.1                            I 9 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              188300 12 +    196477 TTGT-G-----T--TAC--------TTA
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2033486  7 -   3037898 -----------T--TGC--------TTG
i Nannospalax_galili.KL204047.1                          I 9 I 6
s Nasalis_larvatus.k141_413338                               14691  9 +     21681 TTTT-G-----T--TGC-----------
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306499 12 +  31847680 TTCT-A-----T--GAC--------TTG
i Neomonachus_schauinslandi.NINY01007730.1               I 5 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9148913 12 -   9404916 ttta-a-----t--gat--------ttg
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102579349 12 - 196305487 TTTT-G-----T--TGT--------TTG
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_771082                              1194 12 -      2667 TTTT-G-----T--TGT--------TTG
i Nycticebus_coucang.k141_771082                         C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749777 12 + 199412804 TTTT-G-----T--TAT--------TTG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1363277 14 +   3988456 attt-t-----tatttc--------tag
i Ochotona_princeps.JH802162.1                           I 338 C 0
s Odobenus_rosmarus.KB229312.1                              506184 12 -   2017862 TTCT-A-----G--GAC--------TTG
i Odobenus_rosmarus.KB229312.1                           I 5 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   24804  7 +     28053 -----------T--CAC--------TTG
i Ondatra_zibethicus.OndZib_scaffold_46174               I 5 I 6
s Onychomys_torridus.OnyTor_scaffold_2986                    79801  7 +    102263 -----------T--CAC--------TTG
i Onychomys_torridus.OnyTor_scaffold_2986                I 10 I 6
s Orycteropus_afer.OryAfe_flattened_line_144387               9374 12 -     18566 TTCT-A-----T--TGC--------TTG
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67146927 13 + 174332312 ATTTTT-----T--CCC--------TAG
i Oryctolagus_cuniculus.CM000791.1                       I 308 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       461881 12 -    559221 ttta-a-----t--gat--------ttg
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         3842 11 +      8798 TTTT-G-----T--T-T--------TTG
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696007 12 -   1103335 tttt-g-----t--tat--------ttg
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    43638 12 +     80009 TTTT-G-----T--TGC--------TTG
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189142546 12 + 189151597 TTTT-G-----T--TGC--------TTG
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  150716 12 +    230217 TTCT-A-----T--TAT--------TTG
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                263922 12 +  18783137 Ttct-a-----t--tat--------ttg
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4720560 12 -   8748460 Ttct-a-----t--tat--------ttg
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183442737 12 + 183742232 TTTT-G-----T--TGC--------TTG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             6435 12 +     20448 TTTT-G-----T--TGC--------TTG
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563243 12 +  20919399 TTTT-G-----T--TGC--------TTG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   5179 12 +     41871 TTTT-G-----T--TGC--------TTG
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     8464 12 +     27711 TTTT-G-----T--TGC--------TTG
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  8545 12 +      9205 TTTT-G-----T--TGC--------TTG
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12189 12 -     78924 TTCT-A-----T--TAT--------TTG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            9810 12 +     13100 TTTT-G-----T--TAT--------TTG
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8216 12 +     25941 TTTT-G-----T--TAT--------TTG
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18194424  7 -  18517816 -----------T--CAC--------TTG
i Peromyscus_maniculatus.KI615324.1                      I 5 I 6
s Piliocolobus_badius.k141_1234363                           43198 12 +     62158 TTTT-G-----T--TGC--------TTG
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        37929 12 +     89929 TTTT-G-----T--TGC--------TTG
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            39345 12 +     51399 TTTT-G-----T--TGC--------TTG
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14295583 12 -  14605196 TTTT-G-----T--TGC--------TTG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1365 12 +     22620 TTCT-G-----T--TAC--------TGA
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189130680 12 + 189387572 TTTT-G-----T--TGC--------TTG
i Pongo_abelii.CM009266.2                                C 0 I 24608
s Pongo_pygmaeus.ctg66                                     9570288 12 +   9816681 TTTT-G-----T--TGC--------TTG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               72867 12 -     81375 TTTT-G-----T--TGC--------TTG
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              4687 12 +     19060 TTTT-G-----T--TGC--------TTG
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 12878 12 -     22811 CTCT-G-----G--GAC--------TTG
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2596399 12 -   4620579 tttt-g-----t--tac--------tgG
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990383 12 +   2598838 tttt-g-----t--tac--------ttg
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          28692 12 +     38485 TTTT-G-----T--TAC--------TTG
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                               735 12 -     13098 TTTT-G-----T--TAC--------TTG
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26213 12 +     35766 TTTT-G-----T--TAC--------TTG
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4400 12 -     24134 TTTT-G-----T--TAC--------TTG
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28225 12 -     67325 TTTT-G-----T--TAC--------TTG
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4448 12 -      6182 TTTT-G-----T--TAC--------TTG
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            10037  7 -     21651 -----------T--CAC--------TTG
i Psammomys_obesus.NESX01036370.1                        I 5 I 16
s Pteronotus_parnellii.KE909381.1                            14215 12 -     21811 TTCT-G-----T--CAC--------TGG
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39766 12 +     42204 TTCT-A-----T--GAC--------TTG
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 5 C 0
s Pteropus_alecto.KB030862.1                              22976318 12 +  28871421 ttct-a-----t--tac--------ttg
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1359404 12 +   4952924 ttct-a-----t--tac--------ttg
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20273870 12 -  38429054 Ttct-a-----t--tat--------ttg
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             14696 12 -     91421 TTTT-G-----T--TGC--------TTG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7608816 12 +   7812017 TTTT-G-----T--TGC--------TTG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             14668 12 -     72585 TTTT-G-----T--TGC--------TTG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53570285  7 +  90668790 -----------T--CCC--------TTG
i Rattus_norvegicus.chr16                                I 5 I 6
s Rhinopithecus_bieti.k119_217274                             6383 12 -     11128 TTTT-G-----T--TGC--------TTG
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91235738 12 - 195417433 TTTT-G-----T--TGC--------TTG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7671388 12 +   7961872 TTTT-G-----T--TGC--------TTG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87339 12 -     96226 TTCT-A-----T--TAC--------TTG
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               7739 12 -      8359 TTCT-G-----T--TGC--------TTC
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_imperator.k141_2524406                             1698 12 +      2197 TTCT-G-----T--TGC--------TTC
i Saguinus_imperator.k141_2524406                        C 0 C 0
s Saguinus_inustus.k141_699149                               13117 12 +     13640 TTCT-G-----T--TGC--------TTC
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               7986 12 +      8564 TTCT-G-----T--TGC--------TTC
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209468835 12 + 209938924 TTCT-G-----T--TGC--------TTC
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 7544 12 -      9399 TTCT-G-----T--TGC--------TTC
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119950455 12 - 121099817 TTCT-G-----T--TGC--------TTG
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       22911 12 +     46362 TTCT-G-----T--TGC--------TTG
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               23006 12 +     45824 TTCT-G-----T--TGC--------TTG
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             39634 12 -     64574 TTCT-G-----T--TGC--------TTG
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               2640 12 -     23631 TTCT-G-----T--TGC--------TTG
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 22902 12 -     61129 TTCT-G-----T--TGC--------TTG
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420225 12 -   5703754 TTCT-A-----T--TGC--------TTG
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          55266 12 -     80660 TTCT-A-----T--TGC--------TTG
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    152707 12 -    313613 TTCT-T-----T--TAC--------TTG
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 5 C 0
s Semnopithecus_entellus.k141_11662                          19207 12 -     19888 TTTT-G-----T--TGC--------TTG
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26410 12 +     39453 TTTT-G-----T--TGC--------TTG
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            6929 12 +     27826 TTTT-G-----T--TGC--------TTG
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             6450 12 -     19483 TTTT-G-----T--TGC--------TTG
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      6518 12 +      7198 TTTT-G-----T--TGC--------TTG
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         14776 12 +     15514 TTTT-G-----T--TGC--------TTG
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11542  7 -     12148 -----------T--CAC--------TTG
i Sigmodon_hispidus.SigHis_scaffold_60841                I 6 I 6
s Solenodon_paradoxus.SolPar_flattened_line_126               3332 12 +   1910179 TTCT-A-----T--CAT--------TTG
i Solenodon_paradoxus.SolPar_flattened_line_126          I 5 C 0
s Sorex_araneus.JH798187.1                                13650582 12 -  18376816 GTCT-A-----T--TAT--------TCC
i Sorex_araneus.JH798187.1                               I 5 I 7
s Spermophilus_dauricus.KZ294078.1                         1952786 13 -   3870691 -----------T--TATGTCACTCTT--
i Spermophilus_dauricus.KZ294078.1                       C 0 I 772
s Spilogale_gracilis.SpiGra_flattened_line_13525             30266 12 +     97271 TTCT-A-----C--AAC--------TTG
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 5 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              17856 12 -    196729 TTAT-A-----T--CAT--------TTG
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6810029 12 +  69701581 TTCT-A-----G--TAC--------TTA
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1092995 12 -   1523678 TTTT-G-----T--TGC--------TTG
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                10027 12 +     41958 TCAT-A-----T--TAC--------TTG
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 71659 12 +    116680 TTGT-G-----T--TAC--------TTA
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118285 12 -    156842 TTCT-A-----T--TAC--------TTG
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    386742 12 +    539355 TTCT-A-----T--TAC--------TTG
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               25994 11 +     70052 TTTT-G-----T---AC--------TTG
i Tarsius_lariang.k141_2201908                           C 0 I 2
s Tarsius_wallacei.k141_254427                                 827 11 -     16117 TTTT-G-----T---AC--------TTG
i Tarsius_wallacei.k141_254427                           C 0 I 2
s Theropithecus_gelada.CM009954.1                        186428107 12 + 186847797 TTTT-G-----T--TGC--------TTG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   5516 12 +      8208 TTCT-A-----T--TAC--------TTA
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     80459 12 +    610378 TTCT-G-----T--CAC--------TGG
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         10501 12 -     20410 TTTT-G-----T--TGC--------TTG
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    14695 12 +     15221 TTTT-G-----T--TGC--------TTG
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                       10602 12 +     19930 TTTT-G-----T--TGC--------TTG
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       7029 12 -     19997 TTTT-G-----T--TGC--------TTG
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            47153 12 -     60166 TTTT-G-----T--TGC--------TTG
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        14624 12 -     27529 TTTT-G-----T--TGC--------TTG
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     14568 12 -     18194 TTTT-G-----T--TGC--------TTG
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           8296 12 -     21137 TTTT-G-----T--TGC--------TTG
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    6999 12 -     10723 TTTT-G-----T--TGC--------TTG
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         6155 12 +      9834 TTTT-G-----T--TGC--------TTG
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        24468 12 +     32220 TTTT-G-----T--TGC--------TTG
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5938570 12 +   6242583 TTTT-G-----T--TGC--------TTG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        7822 12 +     20839 TTTT-G-----T--TGC--------TTG
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4292792 12 +  10818551 TTCT-C-----T--TAC--------TTG
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2155211 12 +   4065304 TCGT-G-----T--TAC--------TTG
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     8859 12 -     10553 TCGT-G-----T--TAC--------TTG
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   52866 12 -     77625 ATTT-T-----T--TAC--------TTG
i Uropsilus_gracilis.UroGra_scaffold_12083               I 5 C 0
s Ursus_maritimus.KK499267.1                               4849971 12 -   5085361 TTCT-A-----T--GAC--------TTG
i Ursus_maritimus.KK499267.1                             I 5 C 0
s Varecia_rubra.k141_590885                                  11059 12 +     50397 TTTT-G-----T--TAC--------TGG
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11118 12 +     24756 TTTT-G-----T--TAC--------TGG
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371404 11 -   5488506 TTCT-A-----T--TAC--------TT-
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10326 12 -     43706 TTTA-A-----T--GAT--------TTG
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_48378                        23985 13 -     24430 -----------T--CCTCTCCCTATC--
i Xerus_inauris.XerIna_scaffold_48378                    C 0 N 0
s Zalophus_californianus.ZalCal_flattened_line_17732          4897 12 +     86975 TTCT-A-----G--GAC--------TTG
i Zalophus_californianus.ZalCal_flattened_line_17732     I 5 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      14559  7 +     63895 -----------T--TAT--------TTG
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 18 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50341  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352  0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Colobus_guereza.LG01                                   199948958  0 + 200372422 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    136758  0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6302 39 +     62944 A-TTA-TTT-AC-TCTA-GCAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
s Acinonyx_jubatus.LLWD01001279.1                           826875 39 -   1699592 a-tat-ttt-at-tcta-gtaaat-a--aaac-c----aaa-atattt--ta-----------------------tct
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     70473 28 +     87051 ---------------TA-ATAAAC-AA-A-AG-C----AAA-ATATTC--TG-----------------------TCT
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 7 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510123 39 -  29979442 A-TAT-TTT-AT-TCta-gtaaat-a--aaac-c----aaa-atattc--tA-----------------------TCT
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             78892 39 -    347723 A-TAT-TTT-AT-TCTa-gtaaat-a--aaac-c----caa-atattC--TA-----------------------TCT
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     74228 38 -     89534 G-TAC-TTA-GT-TCTA-GTAAAT-AA-T-AA-C----AAA-ACTTTC--TA-----------------------TC-
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14230 43 -     52922 A-TTA-TTT-AC-TCCA-GGAAAT-AA-A-AC-CTGGAGTT-TTATTC--TA-----------------------TCT
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         14166 43 -     28001 A-TTA-TTT-AC-TCCA-GGAAAT-AA-A-AC-CTGGAGTT-TTATTC--TA-----------------------TCT
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          4662 43 -     18505 A-TTA-TTT-AC-TCCA-GGAAAT-AA-A-AC-CTGGAGTT-TTATTC--TG-----------------------TCT
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           5515 43 -     12518 A-TTA-TTT-AC-TCCA-GGAAAT-AA-A-AC-CTGGAGTT-TTATTC--TA-----------------------TCT
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              7032 26 +     51355 ----------------A-GTAAAT-AA-A--C-C----AAA-ACATTC--TA-----------------------TCT
i Alouatta_belzebul.k141_3560514                         N 0 C 0
s Alouatta_caraya.k141_1701091                                 142 38 -     36483 A-TCT-TTT-AC-TCTA-GTAAAT-AA-A--C-C----AAA-ACATTC--TA-----------------------TCT
i Alouatta_caraya.k141_1701091                           N 0 C 0
s Alouatta_discolor.k141_743489                               3208 38 -     45847 A-TCT-TTT-AC-TCTA-GTAAAT-AA-A--C-C----AAA-ACATTC--TA-----------------------TCT
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_2469512                                  618 38 +      1018 A-TCT-TTT-AC-TCTA-GTAAAT-AA-A--C-C----AAA-ACATTC--TA-----------------------TCT
i Alouatta_juara.k141_2469512                            I 127 I 207
s Alouatta_macconnelli.k141_918386                             143 38 -      9457 A-TCT-TTT-AC-TCTA-GTAAAT-AA-A--C-C----AAA-ACATTC--TA-----------------------TCT
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_3472759                            17714 38 -     18578 A-TCT-TTT-AC-TCTA-GTAAAT-AA-A--C-C----AAA-ACATTC--TA-----------------------TCT
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              3113 38 +     47717 A-TCT-TTT-AC-TCTA-GTAAAT-AA-A--C-C----AAA-ACATTC--TA-----------------------TCT
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             3213 38 -      3544 A-TCT-TTT-AC-TCTA-GTAAAT-AA-A--C-C----AAA-ACATTC--TA-----------------------TCT
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             14437 38 +     50774 A-TCT-TTT-AC-TCTA-GTAAAT-AA-A--C-C----AAA-ACATTG--TA-----------------------TCT
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184616 39 +    412891 A-GGT-TTT-AT-GCCA-GTAAAT-A--GAAC-C----AAA-ATATCT--GA-----------------------TCT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  15057 38 -     33861 A-TCT-TTT-AC-TCTA-GTAAAT-AA-A--C-C----AAA-ACATTC--TA-----------------------TCT
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            15077 38 -     34016 A-TCT-TTT-AC-TCTA-GTAAAT-AA-A--C-C----AAA-ACATTC--TA-----------------------TCT
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297474 38 -   5030052 A-TCT-TTT-AC-TCTA-GTAAAT-AA-A--C-C----AAA-ACATTC--TA-----------------------TCT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             15079 38 -     34685 A-TCT-TTT-AC-TCTA-GTAAAT-AA-A--C-C----AAA-ACATTC--TA-----------------------TCT
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28203 38 -     47192 A-TCT-TTT-AC-TCTA-GTAAAT-AA-A--C-C----AAA-ACATTC--TA-----------------------TCT
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      12218 40 +     20879 A-TAT-TTTACT-TCTA-ATAAAT-AA-G-AC-C----AGA-ACATTC--TA-----------------------GTT
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 751 C 0
s Arctocebus_calabarensis.k141_2318572                       11187 39 +     14667 A-TGC-TTT-GT-TGTA-GGAAAT-GA-A-AC-C----AAA-ATATTA--TA-----------------------TCT
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4023 39 +     43469 A-GGT-TTT-AT-GCCA-GTAAAT-A--GAAC-C----AAA-ATATCC--TA-----------------------TCT
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  53348 39 -     92717 A-TAC-TTT-AT-TCTA-GTAAAT-AA-A-AC-C----AAA-ATATTA--CA-----------------------TCT
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              53975 39 +     85213 A-TAC-TTT-AT-TCTA-GTAAAT-AA-A-AC-C----AAA-ATATTA--CA-----------------------TCT
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             4812 38 -     10423 A-TCT-TTT-AC-TCTA-GTAAAT-AA-A--C-C----AAA-ACATTC--TA-----------------------TCT
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             24284 38 +     31915 A-TCT-TTT-AC-TCTA-GTAAAT-AA-A--C-C----AAG-ACATTC--TA-----------------------TCT
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            4778 38 +      5267 A-TCT-TTT-AC-TCTA-GTAAAT-AA-A--C-C----AAA-ACATTC--TA-----------------------TCT
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23589992 38 - 189096842 A-TCT-TTT-AC-TCTA-GTAAAT-AA-A--C-C----AAA-ACATTC--TA-----------------------TCT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             11523 38 -     12001 A-TCT-TTT-AC-TCTA-GTAAAT-AA-A--C-C----AAA-ACATTC--TA-----------------------TCT
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10001913 37 -  17673402 ---at-ttt-at-ccca-gtaaat-a--aaac-c----aaa-acattc--TG-----------------------TCT
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334371 37 -   7040546 ---at-ttt-at-ccca-gtaaat-a--aaac-c----aaa-acattc--TG-----------------------TCT
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  402654 37 -   1652518 ---at-ttt-at-ccca-gtaaat-a--aaac-c----aaa-acattc--TG-----------------------TCT
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17798723 39 -  60362399 A-TAT-TTT-AT-TCCA-GTAAAT-A--AAAC-C----AAA-ATATTC--TA-----------------------TCT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184780 39 -    185531 A-TAT-TTT-AT-TCCA-GTAAAT-A--AAAC-C----AAA-ATATTC--TA-----------------------TCT
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034166 39 -   9314153 a-tat-ttt-at-tcca-gtaaat-a--aaac-c----aaa-atattc--tA-----------------------TCT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17958431 39 -  59632846 a-tat-ttt-at-tcca-gtaaat-a--aaac-c----aaa-atattc--tA-----------------------TCT
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18499943 39 +  63665305 a-tat-ttt-at-tcta-gtaaat-a--aaac-c----aaa-atattc--tA-----------------------TCT
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007247396.1                           200992 24 +    308752 A-TAC-TTT-ag-tcaa-caaaat-ga-a-at----------------------------------------------
i Carlito_syrichta.NW_007247396.1                        C 0 I 9
s Carollia_perspicillata.CarPer_scaffold_92756                4386 39 -     11696 A-GGT-TTT-AT-GCCA-ATAAAT-A--GAAC-C----AAA-ATATCC--TA-----------------------TCC
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     92546 40 +    217609 A-TAT-TTT-AC-CCCA-GTAAAT-A-AAAAC-C----AAT-ATATTC--CA-----------------------TGT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          9437 38 -     11392 A-TCT-TTT-AC-TCTA-GTAAAT-AA-A--C-C----AAA-ACATTC--TA-----------------------TCT
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               5535 38 -      7577 A-TCT-TTT-AC-TCTA-GTAAAT-AA-A--C-C----AAA-ACATTC--TA-----------------------TCT
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25651566 38 +  26074798 A-TCT-TTT-AC-TCTA-GTAAAT-AA-A--C-C----AAA-ACATTC--TA-----------------------TCT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_398305                                 1142 38 +      1777 A-TCT-TTT-AC-TCTA-GTAAAT-AA-A--C-C----AAA-ACATTC--TA-----------------------TCT
i Cebus_olivaceus.k141_398305                            C 0 C 0
s Cebus_unicolor.k141_544048                                 49479 38 -     74725 A-TCT-TTT-AC-TCTA-GTAAAT-AA-A--C-C----AAA-ACATTC--TA-----------------------TCT
i Cebus_unicolor.k141_544048                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         4998 24 +     31688 A-TAC-TTT-AG-TCAA-CAAAAT-TA-A-AT----------------------------------------------
i Cephalopachus_bancanus.k141_1423433                    C 0 I 9
s Ceratotherium_simum.JH767749.1                          12230974 39 +  27778364 A-TAT-TTT-AT-TCTA-GTAGAT-A--AAAC-C----AAA-AGATTC--TA-----------------------TCT
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2001 39 -     25243 A-TAT-TTT-AT-TCTA-GTAGAT-A--AAAC-C----AAA-AGATTC--TA-----------------------TCT
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4475179 39 +   4669795 A-TTA-TTT-AC-TCca-ggaaat-aa-a-ac-c----aaa-acattc--TA-----------------------TCT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        13724 39 -     19203 A-TTA-TTT-AC-TCCA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3342297                            340 39 -     14043 A-TTA-TTT-AC-TCCA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           8376 39 +     27781 A-TTA-TTT-AC-TCCA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         8537 43 -     20310 A-TTA-TTT-AC-TCCA-GGAAAT-AA-A-AC-CTGGAGTT-TTATTC--CG-----------------------TCT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          11516 43 +     29689 A-TTA-TTT-AC-TCCA-GGAAAT-AA-A-AC-CTGGAGTT-TTATTC--CG-----------------------TCT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            6274 25 -     20078 A-TTA-TTT-AC-TCCA-GGAAAT-AA-A-AC-C--------------------------------------------
i Cercopithecus_diana.k141_1150327                       C 0 I 14
s Cercopithecus_hamlyni.k141_187466                          14195 43 -     27936 A-TTA-TTT-AC-TCCA-GGAAAT-AA-A-AC-CTGGAGTT-TTATTC--TG-----------------------TCT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            3061 43 -     17152 A-TTA-TTT-AC-TCCA-GGAAAT-AA-A-AC-CTGGAGTT-TTATTC--TA-----------------------TCT
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38816596 43 +  39242232 A-TTA-TTT-AC-TCCA-GGAAAT-AA-A-AC-CTGGAGTT-TTATTC--CG-----------------------TCT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222290 43 -  21565898 A-TTA-TTT-AC-TCCA-GGAAAT-AA-A-AC-CTGGAGTT-TTATTC--TA-----------------------TCT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       39408 43 -     53127 A-TTA-TTT-AC-TCCA-GGAAAT-AA-A-AC-CTGGAGTT-TTATTC--TA-----------------------TCT
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        6676 42 +      7159 A-TTA-TTT-AC-T-CA-GGAAAT-AA-A-AC-CTGGAGTT-TTATTC--CG-----------------------TCT
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14211 25 -     27947 A-TTA-TTT-AC-TCCA-GGAAAT-AA-A-AC-C--------------------------------------------
i Cercopithecus_petaurista.k141_807961                   C 0 I 14
s Cercopithecus_pogonias.k141_822820                         14184 43 +     17596 A-TTA-TTT-AC-TCCA-GGAAAT-AA-A-AC-CTGGAGTT-TTATTC--TA-----------------------TCT
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                           233 25 +     14005 A-TTA-TTT-AC-TCCA-GGAAAT-AA-A-AC-C--------------------------------------------
i Cercopithecus_roloway.k141_2581234                     C 0 I 14
s Chaetophractus_vellerosus.ChaVel_scaffold_713168            1996 39 -      2554 A-TAC-TCT-AT-TCCA-GTAAAT-AA-A-AG-C----CAA-ACGTTC--TT-----------------------TCT
i Chaetophractus_vellerosus.ChaVel_scaffold_713168       C 0 C 0
s Cheirogaleus_major.k141_333249                             20727 39 -     52598 A-TAC-TTT-TT-TCTA-GTAAAT-AA-A-AC-C----AAA-ACATTA--CA-----------------------TCT
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16092 39 +     57038 A-TAC-TTT-TT-TCTA-GTAAAT-AA-A-AC-C----AAA-ACATTA--CA-----------------------TCT
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                          10689 38 +     11226 A-CCT-TTT-AC-TCTA-GTAAAT-AA-A--C-C----AAA-ACATTC--TA-----------------------TCT
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18428166 43 -  18827391 A-TTA-TTT-AC-TCCA-GGAAAT-AA-A-AC-CTGGAGTT-TTATTC--TA-----------------------TCT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       14603 43 -     50209 A-TTA-TTT-AC-TCCA-GGAAAT-AA-A-AC-CTGGAGTT-TTATTC--TA-----------------------TCT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135421603 43 + 135778131 A-TTA-TTT-AC-TCCA-GGAAAT-AA-A-AC-CTGGAGTT-TTATTC--TA-----------------------TCT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 17414 39 +     19366 A-TAC-TGT-AT-TCCA-GTAAAT-AA-A-AC-C----AAA-ACAATT--GC-----------------------TCT
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            172511 39 +    839153 A-TAC-TGT-AT-TCca-gtaaat-aa-a-ac-c----aaa-acaatt--gC-----------------------TCT
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1910112 39 +   2368649 A-TTA-TCT-AC-TCta-ggaaat-aa-a-ac-c----aaa-acattc--TA-----------------------TCT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_polykomos.k141_906115                              36650 39 +     84244 A-TTA-TCT-AC-TCTA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17547646 39 -  53390261 a-gat-ttt-at-taca-gtaaatta--a-aa-c----aataca-cTC--TA-----------------------CCT
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          13962 39 -     20389 A-TAT-TTT-AC-TCCA-GTAAAT-A--ATAC-C----AAA-ATATTC--TA-----------------------CCT
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 49735 28 +     63868 ---------------TT-ATAAAC-AA-G-AT-C----AAA-ATATTT--TG-----------------------TCT
i Cricetomys_gambianus.CriGam_scaffold_18520             I 6 C 0
s Cricetulus_griseus.LT883664.1                           11667229 28 + 224834208 ---------------ga-ataaac-aa-a-ag-g----aaa-atag--tcTG-----------------------TCT
i Cricetulus_griseus.LT883664.1                          I 6 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               2557 27 -     19598 ----------------A-GAAAATAA--A-AC-A----AAA-AT-ATC--TC-----------------C-----TCT
i Crocidura_indochinensis.CroInd_scaffold_37019          I 7 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28034 39 -     87169 A-TAT-TTT-AT-TCTA-GTAAAT-A--AAAT-C----AAA-ATATTT--TA-----------------------CCT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    836726 39 +   1526836 A-TAC-TTT-AT-TCTA-CTAAAT-AA-A-AT-C----AAA-ATAGTC--TA-----------------------TCT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            62665 39 +   2246927 A-TAC-TCT-GT-TTTA-GTAAAT-AA-A-AC-T----CAA-ATGTCC--TT-----------------------TCT
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12536952 35 -  12879189 C-TCC-TTT-AT-TCTA-GTAAAT-AA-A-AC-C----AAA-ATATTA--T---------------------------
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8629400 39 +  20541912 A-GGT-TTT-AT-GCCA-GTAAAT-A--GAAG-C----AAA-ATATCC--TA-----------------------TAT
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672825 39 +   1390856 A-TAT-TTT-AT-TCTA-GTAGAT-A--AAAC-C----AAA-AGATTC--TA-----------------------TCT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    5577 39 +    198055 A-TAT-TTT-AT-TCTA-GTAGAT-A--AAAC-C----AAA-AGATTC--TA-----------------------TCT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Echinops_telfairi.JH980293.1                            48779974 33 + 111700974 A-TAC-TCT-AT-TATA-GCAAAT-GA-A-AC-C----AAA-ATCTT-------------------------------
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.KE759718.1                                  10073 38 +     11740 a-tat-ttt-at-tcta-GTAGTT-A--A-AC-C----AAA-ATATTC--TA-----------------------TCT
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1097265 39 +  10337057 A-TAC-TCT-AT-TCCA-GCCAAT-AA-A-AC-C----AAA-GTGTTC--TA-----------------------TCT
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          19970 28 -    110024 ---------------ga-ataaac-aa-a-ag-c----aaa-atgt--tcCC-----------------------TCT
i Ellobius_lutescens.LOEQ01008920.1                      I 6 C 0
s Ellobius_talpinus.LOJH01109367.1                            6058 28 -      6299 ---------------aa-ataaac-aa-a-ag-c----aaa-atgt--tcCC-----------------------TCT
i Ellobius_talpinus.LOJH01109367.1                       I 6 C 0
s Enhydra_lutris.KZ291758.1                               16328861 39 -  41312741 A-TAT-TTT-AT-Tcta-gttaat-a--aaac-c----aaa-atattc--tG-----------------------TCT
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2144984 39 -  14770903 A-TGC-TTG-AT-TCta-ataaat-a--aaac-c----taa-atatTC--TA-----------------------TCT
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1283095 39 +   4378816 a-tat-ttt-at-tcta-gtaaat-a--aaac-c----aaa-atattc--tA-----------------------TCT
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18530915 39 -  39960074 a-tat-ttt-at-tcta-gcaaat-a--aaac-c----aaa-atattc--tA-----------------------TCT
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               32944 39 +    498745 a-tat-ttt-at-tcta-gcaaat-a--aaac-c----aaa-atattc--tA-----------------------TCT
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21204773 43 -  21539334 A-TTA-TTT-AC-TCCA-GGAAAT-AA-A-AC-CTGGAGTT-TTATTC--TA-----------------------TCT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13452 39 -     14127 A-TAC-TTT-AT-TCTA-GTAAAT-AA-A-AC-C----AAA-ATATTA--CA-----------------------TCT
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6153 39 -     16928 A-TAC-TTT-AT-TCTA-GTAAAT-AA-A-AC-C----AAA-ATATTA--CA-----------------------TCT
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15179 39 -     25546 A-TAC-TTT-AT-TCTA-GTAAAT-AA-A-AC-C----AAA-ATATTA--CA-----------------------TCT
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12394 28 +     26330 ---------------TA-GTAAAT-AA-A-AC-C----AAA-ATATTA--CA-----------------------TCT
i Eulemur_flavifrons.k141_1184614                        I 6 C 0
s Eulemur_fulvus.k141_544389                                 13616 39 +     23973 A-TAC-TTT-AT-TCTA-GTAAAT-AA-A-AC-C----AAA-ATATTA--CA-----------------------TCT
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12391 28 +     75513 ---------------TA-GTAAAT-AA-A-AC-C----AAA-ATATTA--CA-----------------------TCT
i Eulemur_macaco.k141_1562045                            I 6 C 0
s Eulemur_mongoz.k141_232305                                 10311 39 +     97555 A-TAC-TTT-AT-TCTA-GTAAAT-AA-A-AC-C----AAA-ATATTA--CA-----------------------TCT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            13242 39 +     26496 A-TAC-TTT-AT-TCTA-GTAAAT-AA-A-AC-C----AAA-ATATTA--CA-----------------------TCT
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  3852 39 -     17153 A-TAC-TTT-AT-TCTA-GTAAAT-AA-A-AC-C----AAA-ATATTA--CA-----------------------TCT
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13427 39 +    111500 A-TAC-TTT-AT-TCTA-GTAAAT-AA-A-AC-C----AAA-ATATTA--CA-----------------------TCT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20236526 39 + 206538554 a-tat-ttt-at-tcta-gtaaat-a--aaac-c----aaa-atattt--ta-----------------------tct
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195369 39 + 205367284 a-tat-ttt-at-tcta-gtaaat-a--aaac-c----aaa-atattt--ta-----------------------tct
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  8883 39 -     36744 A-TAT-TTT-AT-TCTA-GTAAAT-A--AAAC-C----AAA-ATATTT--TA-----------------------TCT
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     426321 39 -    453645 A-TGC-TTT-GT-TGTA-GCAAAT-AA-A-AC-C----AAA-ATATTA--TA-----------------------TCT
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4012 39 +     11339 A-TGC-TTT-GT-TGTA-GCAAAT-AA-A-AC-C----AAA-ATATTA--TA-----------------------TCT
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            1326 39 +     41679 A-TGC-TTT-GT-TGTA-GCAAAT-AA-A-AC-C----AAA-ATATTA--TA-----------------------TCT
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840                779 39 -      9135 A-TAC-TTT-AT-TCTA-GCAAAC-AG-A-AC-C----AAA-ATATTC--TG-----------------------TCT
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              15557 39 -     32273 A-TTA-TTT-AC-TCTA-ACAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186337703 39 + 186649187 A-TTA-TTT-AC-TCTa-gcaaat-aa-a-ac-c----aaa-acattc--TA-----------------------TCT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6498 39 -     19426 A-TAC-TTT-AT-TCTA-GTAAAT-AA-A-AC-C----AAA-ATATTA--CA-----------------------TCT
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             11647 39 -     15286 A-TAC-TTT-AT-TCTA-GTAAAT-AA-A-AC-C----AAA-ATATTA--CA-----------------------TCT
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13286 39 +     18253 A-TAC-TTT-AT-TCTA-GTAAAT-AA-A-AC-C----AAA-ATATTA--CA-----------------------TCT
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13387 39 -     41752 A-TAC-TTT-AT-TCTA-GTAAAT-AA-A-AC-C----AAA-ATATTA--CA-----------------------TCT
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13224 39 -     16460 A-TAC-TTT-AT-TCTA-GTAAAT-AA-A-AC-C----AAA-ATATTA--CA-----------------------TCT
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               241869 39 +    327341 A-TAT-TTT-AT-TCTA-ATCAAT-A--AATC-C----AAA-ATATTT--TA-----------------------TCT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                 435 40 +      7595 A-TAC-TCT-GT-TCTAAGCAAAT-AA-A-AC-C----AAA-ATATCC--CA-----------------------GGT
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hoolock_leuconedys.ctg274                                    434372 39 +    630532 A-TTA-TTT-AC-TCTA-GCAAAT-AA-A-AC-C----AAA-GCATTC--TG-----------------------TCT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  44281 39 +     55795 A-TAT-TTT-AT-TCTA-GTAAAA-G--AAAC-C----AAA-CTATTT--TA-----------------------TCT
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_232023                                2138 39 -     12752 A-TTA-TTT-AC-TCTA-GCAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                               2182 39 +     14092 A-TTA-TTT-AC-TCTA-GCAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189542965 39 - 191637585 A-TTA-TTT-AC-TCTA-GCAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3335860 39 -  11177569 A-TTA-TTT-AC-TCTA-GCAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7520517 40 -   7955117 A-TAC-TTTAAT-TCta-gtaaat-aa-a-at-c----aga-atatta--ta-----------------------gTT
i Ictidomys_tridecemlineatus.JH393364.1                  I 903 C 0
s Indri_indri.k141_3655594                                   22169 39 +     31101 A-TAC-TTT-AT-TCTA-GTAAAT-AA-A-AC-C----AAA-ATATTA--CA-----------------------TCT
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8276503 38 -   9596543 G-TAC-TTA-GT-TCTa-gcaaat-aa-t-aa-c----aaa-actTTC--TA-----------------------TC-
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    13401 39 -     42476 A-TGC-TTG-AT-TCTA-GTCAAT-A--AAAC-A----CAA-ATATCC--TA-----------------------TCT
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15523731 39 -  30322482 A-TAC-TTT-AT-TCTA-GTAAAT-AA-A-AC-C----AAA-ATATTA--CA-----------------------TCT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7075 38 +     64341 A-CCT-TTT-AC-TCTA-GTAAAT-AA-A--C-C----AAA-ACATTC--TG-----------------------TCT
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           4399 37 +      4941 A-CCT-TT--AC-TCTA-GTAAAT-AA-A--C-C----AAA-ACATTC--TG-----------------------TCT
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        7117 37 +     35603 A-CC--TTT-AC-TCTA-GTAAAT-AA-A--C-C----AAA-ACATTC--TG-----------------------TCT
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    28587 38 +     38576 A-TCT-TCT-AC-TCTA-GTAAAT-AA-A--C-C----AAA-ACATTC--TA-----------------------TCT
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         25284 38 +     66356 A-TCT-TCT-AC-TCTA-GTAAAT-AA-A--C-C----AAA-ACATTC--TA-----------------------TCT
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         10629 39 -     23766 A-TAC-TTT-AT-TCTA-GTAAAT-AA-A-AC-C----AAA-ATATTA--CA-----------------------TCT
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             28690 39 +     45836 A-TAC-TTT-AT-TCTA-GTAAAT-AA-A-AC-C----AAA-ATATTA--CA-----------------------TCT
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1227 39 +     25010 A-TAC-TTT-AT-TCTA-GTAAAT-AA-A-AC-C----AAA-ATATTA--CA-----------------------TCT
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      26626 39 +     54090 A-TAC-TTT-AT-TCTA-GTAAAT-AA-A-AC-C----AAA-ATATTA--CA-----------------------TCT
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3042389 39 +   3914936 A-TAT-TTT-AT-TCta-gtaaat-a--aaac-c----aaa-atattt--ta-----------------------tct
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6058 39 -     14121 G-TAT-TTT-AT-TCTA-GTAAAT-AA-A-GC-C----AAA-ATATTC--CC-----------------------CTT
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1436726 39 +   1826925 A-TTA-TTT-AC-TCCA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5569 39 +     11245 A-TGC-TTT-GT-TGTG-GCAAAT-AA-A-AC-C----AAA-ATATTA--TA-----------------------TCT
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004389 39 +   6120653 A-TGC-TTT-GT-TGTG-GCAAAT-AA-A-AC-C----AAA-ATATTA--TA-----------------------TCT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4216874 40 -  43346337 A-TGC-TCT-AT-TCTaagcaaat-aa-a-ac-c----aaa-atatcC--TA-----------------------ACT
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17954671 39 -  59628241 a-tat-ttt-at-tcta-gtaaat-a--aaac-c----aaa-atattc--ta-----------------------TCT
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               6536 39 +     40492 A-TTA-TTT-AC-TCCA-AGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59675795 39 +  60120075 A-TTA-TTT-AC-TCCA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 12308 39 -     26193 A-TTA-TTT-AC-TCCA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            80092 39 -    114318 A-TTA-TTT-AC-TCCA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  5783 39 -     23192 A-TTA-TTT-AC-TCCA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                15252 39 -     29190 A-TTA-TTT-AC-TCCA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  23817 39 +     37952 A-TTA-TTT-AC-TCCA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186838906 39 + 187317192 A-TTA-TTT-AC-TCca-ggaaat-aa-a-ac-c----aaa-acattc--TA-----------------------TCT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25457469 39 -  25927173 A-TTA-TTT-AC-Tcca-ggaaat-aa-a-ac-c----aaa-acattc--TA-----------------------TCT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  79665 39 +     89720 A-TTA-TTT-AC-TCCA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 6666 39 +     20474 A-TTA-TTT-AC-TCCA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   6466 39 -     14993 A-TTA-TTT-AC-TCCA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  329332 39 -    668171 A-TTA-TTT-AC-TCCA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 4782 39 -     24072 A-TTA-TTT-AC-TCCA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               25404 39 -     45290 A-TTA-TTT-AC-TCCA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90170 38 +     94391 A-TAT-TTT-AT-TCTA-GTAATT-A--A-AC-A----AAA-ATATTC--TA-----------------------TCT
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23936999 39 -  24302211 A-TTA-TTT-AC-TCCA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               351127 39 +    752769 A-TTA-TTT-AC-TCCA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33102701 40 -  40650429 A-TAC-TTTAAT-TCta-gtaaat-aa-a-at-c----aga-atcttA--TA-----------------------GTT
i Marmota_marmota.CZRN01000018.1                         I 775 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         9877 39 -    207569 A-TAT-TGT-AT-TCTA-ATAAAT-A--AAAC-C----AAA-ATATTT--TA-----------------------CCT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              9578 39 +     13704 A-TAT-TTG-AT-TCCA-GTTAAT-A--AAAC-C----AAA-ATATTC--TG-----------------------TCT
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 32421 17 +    140813 ------------------------------AG-C----AAG-ATATTC--TG-----------------------TCT
i Meriones_unguiculatus.MerUng_scaffold_7390             I 16 C 0
s Mesocricetus_auratus.KB708134.1                         12181907 28 -  29670104 ---------------ga-ataaac-aa-a-ag-t----aaa-atat--tctg-----------------------TCT
i Mesocricetus_auratus.KB708134.1                        I 6 C 0
s Mico_argentatus.k141_1239457                                5352 38 -      7380 A-TCT-TTT-AC-TCTA-GTAAAT-AA-A--C-C----AAA-ACATTC--TA-----------------------TCT
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               4425 38 +     18990 A-TCT-TTT-AC-TCTA-GTAAAT-AA-A--C-C----AAA-ACATTC--TA-----------------------TCT
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      5364 38 -      7356 A-TCT-TTT-AC-TCTA-GTAAAT-AA-A--C-C----AAA-ACATTC--TA-----------------------TCT
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18291149 41 -  93316391 A-CACtttt-ttttcta-gtaaat-aa-a-ac-c----aaa-acatta--cA-----------------------TCT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    21702 38 -    145209 A-TA--TCT-AT-TACA-GTACAT-GA-A-AC-C----CAA-ATATTC--TG-----------------------TCT
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                14941 39 -     19307 A-GGT-TTT-AT-GCCA-GTATAT-A--GAAC-C----AAA-GTATCC--TA-----------------------TCT
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850177 39 +   8254450 A-TGC-CTT-GT-TCTA-GTaaat-t--aaac-c----aaa-atattt--ca-----------------------tct
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             33854 39 +     64694 A-TGC-CTT-GT-TCTA-GTAAAT-T--AAAC-C----AAA-ATATTT--CA-----------------------TCT
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           8721 43 -     28506 A-TTA-TTT-AC-CCCA-GGAAAT-AA-A-AC-CTGGAGTT-TTATTC--TA-----------------------TCT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         5257 39 -      8324 A-TAT-TTT-AT-TCTA-GTAAAT-A--AAAC-C----AAA-ATATTT--TA-----------------------TCT
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      8695 40 -     37649 A-CACTTTT-TT-TCTA-GTAAAT-GA-A-AC-C----AAA-ACATTA--CA-----------------------TCT
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140884 39 -    366855 A-GGT-TTT-AT-TCTA-GTAAAT-A--AAAC-C----AAA-ATATTC--TA-----------------------TCT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   34968 39 +     37127 A-TAT-TTT-AT-TCTA-ATAAAT-A--AATC-C----AAA-ATATTT--TA-----------------------TCT
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           6048 39 +     14753 A-TGC-TTG-AT-TCTA-GTAAAT-A--AAAC-C----TAA-ATATTC--TA-----------------------TCT
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84361027 28 - 120012414 ---------------aa-ataaac-aa-a-ag-c----aaa-atattc--tG-----------------------ACT
i Mus_caroli.LT608237.1                                  I 6 C 0
s Mus_musculus.chr8                                       87650025 28 - 129401213 ---------------aa-ataaac-aa-a-ag-c----aaa-atattc--tG-----------------------ACT
i Mus_musculus.chr8                                      I 6 C 0
s Mus_pahari.LT608297.1                                   31354681 28 -  89631738 ---------------aa-ataaac-aa-a-ag-c----aaa-atattc--tG-----------------------ACT
i Mus_pahari.LT608297.1                                  I 6 C 0
s Mus_spretus.CM004101.1                                  90752086 28 - 130317789 ---------------at-ataaac-aa-a-ag-c----aaa-atattc--tG-----------------------ACT
i Mus_spretus.CM004101.1                                 I 6 C 0
s Mustela_putorius.JH418006.1                               300762 39 -  14710649 G-TAT-TTT-AT-TCta-gttaat-a--aaac-c----aaa-atattc--tg-----------------------tat
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                279220 39 -  10118263 A-TGC-TTG-AT-TCTA-gtaaat-a--aaac-c----caa-atattC--TA-----------------------TCT
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1586913 39 -   6019432 A-TGC-TTG-AT-TCTA-gtaaat-a--aaac-c----caa-atattC--TA-----------------------TCT
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3902985 39 -   4330536 A-TGC-TTG-AT-TCTA-gtaaat-a--aaac-c----caa-atattC--TA-----------------------TCT
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              188312 39 +    196477 A-TAC-TCT-AT-TCTA-GTAAAT-AA-A-TC-C----AAA-GTGTTC--AA-----------------------TCT
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2033499 28 -   3037898 ---------------ta-gtaaat-aa-a-aa-c----aaa-atattc--tg-----------------------tct
i Nannospalax_galili.KL204047.1                          I 6 I 243
s Nasalis_larvatus.k141_413338                               14700 38 +     21681 --TTA-TTT-AC-TCTA-GGAAAT-AA-A-AC-C----ACA-ACATTC--TA-----------------------TGT
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306511 39 +  31847680 A-TAT-TTT-AT-TCta-gtaaat-a--aaac-c----aaa-atattt--ta-----------------------tct
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9148925 39 -   9404916 a-tat-ttt-at-tcta-gtaaat-a--aaac-c----aaa-atagtc--TA-----------------------TCT
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102579361 39 - 196305487 A-TGC-TTT-GT-TGTG-GCAAAT-AA-A-AC-C----AAA-ATATTA--TA-----------------------TGT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_771082                              1206 39 -      2667 A-TGC-TTT-GT-TGTG-GCAAAT-AA-A-AC-C----AAA-ATATTA--TA-----------------------TGT
i Nycticebus_coucang.k141_771082                         C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749789 39 + 199412804 A-TGC-TTT-GT-TGTG-GCAAAT-AA-A-AC-C----AAA-ATATTA--TA-----------------------TCT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1363291 39 +   3988456 g-tgt-ttt-at-ttta-ataaac-aa-a-gc-C----AAA-TTATTC--CC-----------------------CTT
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              506196 39 -   2017862 A-TAT-TTT-AT-TCta-gtaaat-a--aaac-c----aaa-atattt--ta-----------------------tct
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   24817 28 +     28053 ---------------GA-ATAAAC-AA-A-AG-C----AAA-ATGT--TCCA-----------------------TCT
i Ondatra_zibethicus.OndZib_scaffold_46174               I 6 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    79814 26 +    102263 ---------------GA-ATAAGC-AA-G-AG-C----AAA-ATAT----TG-----------------------TCT
i Onychomys_torridus.OnyTor_scaffold_2986                I 6 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9386 39 -     18566 A-TAC-TCT-AT-TCTA-GCAAAT-GA-A-AC-C----AAA-ATATTT--TA-----------------------TCT
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67146940 39 + 174332312 G-TAT-TTT-AT-TCTA-GTAAAT-AA-A-GC-C----AAA-ATATTC--CC-----------------------CTT
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       461893 39 -    559221 a-tat-ttt-at-tcta-gtaaat-a--aaac-c----aaa-atattc--tA-----------------------TCT
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         3853 39 +      8798 A-TGT-TTT-GT-TGTA-GCAAAT-AA-A-AC-C----AAA-ATATTA--TA-----------------------TCT
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696019 39 -   1103335 a-tgT-TTT-GT-TGta-gcaaat-aa-a-ac-c----aaa-atatta--tA-----------------------TCT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    43650 39 +     80009 A-TTA-TTT-AC-TCTa-gcaaat-aa-a-ac-c----aaa-acattc--TA-----------------------TCT
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189142558 39 + 189151597 A-TTA-TTT-AC-TCTa-gcaaat-aa-a-ac-c----aaa-acattc--TA-----------------------TCT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  150728 39 +    230217 C-TAT-TTT-AT-TCTA-GTAAAT-A--AAAC-C----AAA-ATATTT--TA-----------------------TCT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                263934 39 +  18783137 a-tat-ttt-at-tcta-gtaaat-a--aaac-c----aaa-atattt--ta-----------------------tct
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4720572 39 -   8748460 a-tat-ttt-at-tcta-gtaaat-a--aaac-c----aaa-atattt--ta-----------------------tct
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183442749 39 + 183742232 A-TTA-TTT-AC-TCca-ggaaat-aa-a-ac-c----aaa-acattc--TA-----------------------TCT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             6447 39 +     20448 A-TTA-TTT-AC-TCCA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563255 39 +  20919399 A-TTA-TTT-AC-TCCA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   5191 39 +     41871 A-TTA-TTT-AC-TCCA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     8476 39 +     27711 A-TTA-TTT-AC-TCCA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  8557 39 +      9205 A-TTA-TTT-AC-TCCA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12201 39 -     78924 A-TAT-TTT-AT-TCTA-GTACAT-A--AAAC-C----AAA-ATATTT--TA-----------------------TAT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            9822 39 +     13100 A-CGC-TTT-GT-TGTA-GGAAAT-AA-A-AC-A----AAA-ATATTG--TA-----------------------TCT
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8228 39 +     25941 A-CGT-TTT-GT-TGTA-GGAAAT-AA-A-AC-C----AAA-ATATTA--TA-----------------------TCT
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18194437 26 -  18517816 ---------------GA-ATAAAG-GA-A-AG-C----GAA-ATAT----TG-----------------------TCT
i Peromyscus_maniculatus.KI615324.1                      I 6 C 0
s Piliocolobus_badius.k141_1234363                           43210 39 +     62158 A-TTA-TTT-AC-TCTA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        37941 39 +     89929 A-TTA-TTT-AC-TCTA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            39357 39 +     51399 A-TTA-TTT-AC-TCTA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14295595 39 -  14605196 A-TTA-TTT-AC-TCta-ggaaat-aa-a-ac-c----aaa-acattc--TA-----------------------TCT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1377 39 +     22620 A-TGT-TTG-AT-TCTA-GTAAAT-A--AAAC-C----CAA-ATATTC--TA-----------------------TCT
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189155300 39 + 189387572 A-TTA-TTT-AC-TCTa-gcaaat-aa-a-ac-c----aaa-acattc--TA-----------------------TCT
i Pongo_abelii.CM009266.2                                I 24608 T 24608
s Pongo_pygmaeus.ctg66                                     9570300 39 +   9816681 A-TTA-TTT-AC-TCTA-GCAAAT-AA-A-AT-C----AAA-ACATTC--TA-----------------------TCT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               72879 39 -     81375 A-TTA-TTT-AC-TCTA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              4699 39 +     19060 A-TTA-TTT-AC-TCTA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 12890 40 -     22811 A-TAC-TCT-GT-TCTAAGCAAAT-AA-A-AC-C----AAA-ATATCC--CA-----------------------GGT
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2596411 39 -   4620579 A-TAC-TTT-AT-TCta-gtaaat-aa-a-ac-c----aaa-atatta--ca-----------------------TCT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990395 39 +   2598838 a-tat-ttt-at-tcta-gtaaat-aa-a-ac-c----aaa-atatta--cA-----------------------TCT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          28704 39 +     38485 A-TAT-TTT-AT-TCTA-GTAAAT-AA-A-AC-C----AAA-ATATTA--CA-----------------------TCT
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                               747 39 -     13098 G-TAT-TTT-AT-TCTA-GTAAAT-AA-A-AC-C----AAA-ATATTA--CA-----------------------TCT
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26225 39 +     35766 A-TAT-TTT-AT-TCTA-GTAAAT-AA-A-AC-C----AAA-ATATTA--CA-----------------------TCT
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4412 39 -     24134 A-TAT-TTT-AT-TCTA-GTAAAT-AA-A-AC-C----AAA-ATATTA--CA-----------------------TCT
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28237 39 -     67325 A-TAT-TTT-AT-TCTA-GTAAAT-AA-A-AC-C----AAA-ATATTA--CA-----------------------TCT
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4460 39 -      6182 A-TAT-TTT-AT-TCTA-GTAAAT-AA-A-AC-C----AAA-ATATTA--CA-----------------------TCT
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            10060 17 -     21651 ------------------------------ag-c----aaa-atattc--tg-----------------------TCT
i Psammomys_obesus.NESX01036370.1                        I 16 C 0
s Pteronotus_parnellii.KE909381.1                            14227 39 -     21811 A-GGT-TTT-AT-TCTA-GCAAAT-A--AAAC-C----CAA-ATACCC--TA-----------------------TCT
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39778 39 +     42204 A-TGT-TTT-AT-TCTA-GTTAAT-A--AAAC-C----AAA-ATATTC--TG-----------------------TCT
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22976330 38 +  28871421 A-TAT-TTG-AT-CCTA-GTAATT-A--A-AC-C----AAA-ATATTC--TA-----------------------TCT
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1359416 38 +   4952924 A-TAT-TTG-AT-CCTA-GTAATT-A--A-AC-C----AAA-ATATTC--TA-----------------------TCT
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20273882 39 -  38429054 a-tat-ttt-at-tcta-gtaaat-a--aaac-c----aaa-atattt--ta-----------------------tct
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             14708 39 -     91421 A-TTA-TTT-AC-TCTA-GGAAAT-AA-A-AC-C----ACA-ACATTC--TA-----------------------TCT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7608828 39 +   7812017 A-TTA-TTT-AC-TCTA-GGAAAT-AA-A-AC-C----ACA-ACATTC--TA-----------------------TCT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             14680 39 -     72585 A-TTA-TTT-AC-TCTA-GGAAAT-AA-A-AC-C----ACA-ACATTC--TA-----------------------TCT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53570298 20 +  90668790 -------------------------AA-A-AG-C----AAA-ATATTC--TG-----------------------ACT
i Rattus_norvegicus.chr16                                I 6 C 0
s Rhinopithecus_bieti.k119_217274                             6395 39 -     11128 A-TTA-TTT-AC-TCTA-GGAGAC-AA-A-AC-C----GCA-ACATTC--TA-----------------------TCT
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91235750 39 - 195417433 A-TTA-TTT-AC-TCTA-GGAGAT-AA-A-AC-C----GCA-ACATTC--TA-----------------------TCT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7671400 39 +   7961872 A-TTA-TTT-AC-TCTA-GGAGAC-AA-A-AC-C----GCA-ACATTC--TA-----------------------TCT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87351 38 -     96226 A-TAT-TTT-AT-TCTA-GTAATT-A--A-AC-C----AAA-ATATTC--TA-----------------------TCT
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               7751 38 -      8359 A-CCT-TTT-AC-TCTA-GTAAAT-AA-A--C-C----AAA-ACATTC--TA-----------------------TCT
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_imperator.k141_2524406                             1710 38 +      2197 A-CCT-TTT-AC-TCTA-GTAAAC-AA-A--C-C----AAA-ACATTC--TA-----------------------TCT
i Saguinus_imperator.k141_2524406                        C 0 C 0
s Saguinus_inustus.k141_699149                               13129 38 +     13640 A-CCT-TTT-AC-TCTA-GTAAAC-AA-A--C-C----GAA-ACATTC--TA-----------------------TCT
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               7998 38 +      8564 A-CCT-TTT-AC-TCTA-GTAAAC-AA-A--C-C----AAA-ACATTC--TA-----------------------TCT
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209468847 38 + 209938924 A-CCT-TTT-AC-TCTA-GTAAAT-AA-A--C-C----AAA-ACATTC--TG-----------------------TCT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 7556 38 -      9399 A-CCT-TTT-AC-TCTA-GTAAAC-AA-A--C-C----AAA-ACATTC--TA-----------------------TCT
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119950467 38 - 121099817 A-TCT-TTT-AC-TCTG-GTAAAT-AA-A--C-C----AAA-ACATTG--CA-----------------------TCT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       22923 38 +     46362 A-TCT-TTT-AC-TCTG-GTAAAT-AA-A--C-C----AAA-ACATTG--CA-----------------------TCT
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               23018 38 +     45824 A-TCT-TTT-AC-TCTG-GTAAAT-AA-A--C-C----AAA-ACATTG--CA-----------------------TCT
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             39646 38 -     64574 A-TCT-TTT-AC-TCTG-GTAAAT-AA-A--C-C----AAA-ACATTG--CA-----------------------TCT
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               2652 38 -     23631 A-TCT-TTT-AC-TCTG-GTAAAT-AA-A--C-C----AAA-ACATTG--CA-----------------------TCT
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 22914 38 -     61129 A-TCT-TTT-AC-TCTG-GTAAAT-AA-A--C-C----AAA-ACATTG--CA-----------------------TCT
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420237 38 -   5703754 A-TCT-TTT-AC-TCTA-GTAAAT-AA-A--C-C----AAA-ACATTC--TA-----------------------TCT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          55278 38 -     80660 A-TCT-TTT-AC-TCTA-GTAAAT-AA-A--C-C----AAA-ACATTC--TA-----------------------TCT
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    152719 38 -    313613 A-TAT-TTT-AT-T-CA-GTAAATAA--A-AA-C----AATATA-TTC--TA-----------------------TTT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          19219 39 -     19888 A-TTA-TTT-AC-TCTA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26422 39 +     39453 A-TTA-TTT-AC-TCTA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            6941 39 +     27826 A-TTA-TTT-AC-TCTA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             6462 39 -     19483 A-TTA-TTT-AC-TCTA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      6530 39 +      7198 A-TTA-TTT-AC-TCTA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         14788 39 +     15514 A-TTA-TTT-AC-TCTA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11555 21 -     12148 ---------------AA-ATGAAC-AA-A-AG-C----AAA-ATAT--------------------------------
i Sigmodon_hispidus.SigHis_scaffold_60841                I 6 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               3344 37 +   1910179 A-CAT-TTT-AT-TGTA-GTAAAC-A--A-AC-C----AAA-AT-TTC--TG-----------------------TCT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13650601 27 -  18376816 ----------------A-GTAAATTA--A-AC-C----AAA-AT-ATT--AC-A---------------------TCT
i Sorex_araneus.JH798187.1                               I 7 C 0
s Spermophilus_dauricus.KZ294078.1                         1953571 40 -   3870691 A-TAC-TTTAAT-TCta-gtaaat-aa-a-at-c----aga-atatta--ta-----------------------gTT
i Spermophilus_dauricus.KZ294078.1                       I 772 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30278 39 +     97271 A-TAT-TTT-TT-TCTA-GTAAAT-A--AAAC-C----AAA-ATATTC--TG-----------------------TCT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              17868 39 -    196729 A-TAT-TTT-AT-TCTA-ATAAAT-A--AATC-T----AAA-ATATTT--TA-----------------------TCT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6810041 40 +  69701581 A-TAT-TTT-AT-CCCA-GTAAAG-A-AAAAC-C----AGT-ATATCC--CA-----------------------CGT
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1093007 39 -   1523678 A-TTA-TTT-AC-TCTA-GCAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                10039 39 +     41958 A-TGT-TTT-AT-TCTA-GTAAAT-A--AAAC-C----AAA-ATATTC--TG-----------------------TCT
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 71671 39 +    116680 A-TAC-TCT-AT-TCTA-GTAAAT-AC-A-TC-C----AAA-ATGTTC--AA-----------------------TCT
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118297 39 -    156842 A-TAT-TTT-AT-TGTA-GTAAAT-A--AAAC-A----AAA-ATATTC--TA-----------------------TCT
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    386754 39 +    539355 A-TAT-TTT-AT-TGTA-GTAAAT-A--AAAC-C----AAA-ATATTC--TA-----------------------TCT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               26007 12 +     70052 ----------------A-CAAAAT-TA-A-AT----------------------------------------------
i Tarsius_lariang.k141_2201908                           I 2 I 9
s Tarsius_wallacei.k141_254427                                 840 12 -     16117 ----------------A-CAAAAT-TA-A-AT----------------------------------------------
i Tarsius_wallacei.k141_254427                           I 2 I 9
s Theropithecus_gelada.CM009954.1                        186428119 39 + 186847797 A-TTA-TTT-AC-TCca-ggaaat-aa-a-ac-c----aaa-acattc--TA-----------------------TCT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   5528 39 +      8208 A-CAC-TCT-AT-TCTA-GTAAAT-AA-A-AC-C----CAA-ATGTTC--TT-----------------------TCT
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     80471 39 +    610378 A-GGT-TTT-AT-GCTA-GTAAAT-A--GAAC-C----AAA-ATATCC--TA-----------------------TCT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         10513 39 -     20410 A-TTA-TTT-AC-TCTA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    14707 39 +     15221 A-TTA-TTT-AC-TCTA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                       10614 39 +     19930 A-TTA-TTT-AC-TCTA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       7041 39 -     19997 A-TTA-TTT-AC-TCTA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            47165 39 -     60166 A-TTA-TTT-AC-TCTA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        14636 39 -     27529 A-TTA-TTT-AC-TCTA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     14580 39 -     18194 A-TTA-TTT-AC-TCTA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           8308 39 -     21137 A-TTA-TTT-AC-TCTA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    7011 39 -     10723 A-TTA-TTT-AC-TCTA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         6167 39 +      9834 A-TTA-TTT-AC-TCTA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        24480 39 +     32220 A-TTA-TTT-AC-TCTA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5938582 39 +   6242583 A-TTA-TTT-AC-TCTA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        7834 39 +     20839 A-TTA-TTT-AC-TCTA-GGAAAT-AA-A-AC-C----AAA-ACATTC--TA-----------------------TCT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4292804 40 +  10818551 A-TAC-TCT-AT-TCtaagtaaat-aa-a-ac-c----aaa-atatcC--TC-----------------------ACT
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2155223 58 +   4065304 A-TAT-TTT-AT-TCTA-CTAAAT-GG-A-AC-C----CAA-ATATTC--CATAT-TCCGTTAT-AT--CGTAAATAT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     8871 61 -     10553 A-TAT-TTT-AT-TCTA-CTAAAT-GG-A-AC-C----CAA-ATATTC--CATATGTA-GTTATGATATCATAAATCT
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   52878 37 -     77625 A-TAT-TTT-AT-TCTA-GTAAATGA--A-AA-C----AAA-AA-TTC--T------------------------CTT
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4849983 39 -   5085361 A-TAT-TTT-AT-TCTA-GTAAAT-A--AAGC-C----AAA-ATATTC--TA-----------------------TCT
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  11071 39 +     50397 A-TAC-TTT-AT-TCTA-GTAAAT-AA-A-AC-C----AAA-ATATTA--CA-----------------------TCT
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11130 39 +     24756 A-TAC-TTT-AT-TCTA-GTAAAT-AA-A-AC-C----AAA-ATATTA--CA-----------------------TCT
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371415 38 -   5488506 ---AT-TTT-AT-CCCa-gtaaat-a--aaaccc----aaa-acattC--TG-----------------------TCT
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10338 39 -     43706 A-TAT-TTT-AT-ACTA-GTAAAT-A--AAAC-C----AAA-ATATTC--TA-----------------------TCT
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                           701 40 +    224448 A-TAC-TTTAAT-TCTA-GTAAAT-TA-A-AC-C----AGA-ATGTTC--TA-----------------------GTT
i Xerus_inauris.XerIna_scaffold_2302                     N 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          4909 39 +     86975 G-TAT-TTT-AT-TCTA-GTAAAT-A--AAAC-C----AAA-ATATTT--TA-----------------------TCT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      14566 39 +     63895 G-TAC-TTT-AT-TCTG-GTAAAT-AA-T-AC-C----AAA-GCTTTC--TA-----------------------TCC
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50341  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352  0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3326790 627 -   7059049 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Colobus_guereza.LG01                                   199948958  0 + 200372422 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    136758  0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6341 43 +     62944 TC-AGATATGACATAATAATC-AA--------------C----TAT--------------------------GAAC----CTTGGTGTGTGGG
s Acinonyx_jubatus.LLWD01001279.1                           826914 38 -   1699592 tt-agatATGACTTTACAATC-AA--------------C----CA---T-----------------------GAGA----CCAGATGC-----
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 7
s Acomys_cahirinus.AcoCah_scaffold_12655                     70501 38 +     87051 TT-AGATATGACACCACAAAC-AG--------------C----CA---T-----------------------AAGT----GTTAGTAC-----
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 13
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510162 37 -  29979442 TT-AGATATGACTCCATTATC-A---------------T----TA---T-----------------------GAGA----CCAGATGC-----
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 7
s Ailurus_fulgens.LNAC01001112.1                             78931 38 -    347723 TT-AGGTATGACTCCATAATC-AA--------------C----TA---T-----------------------GAGA----CCAGATGC-----
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 7
s Allactaga_bullata.AllBul_scaffold_9566                     74266 15 -     89534 -------------------------------------------CA---T-----------------------GAGC----CACAGTCC-----
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 7
s Allenopithecus_nigroviridis.k141_3361533                   14273 43 -     52922 TT-AGAGACGACATAGTAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         14209 43 -     28001 TT-AGAGACGACATAGTAATC-AA--------------C----CAT--------------------------GAGC----CTGGATGTGTGGG
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          4705 43 -     18505 TT-AGAGACGACATAGTAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           5558 43 -     12518 TT-AGAGACGACATAGTAATC-AA--------------C----CAT--------------------------GAGC----CTGGATGTGTGGG
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              7058 38 +     51355 TT-AGATATGAAGTAATAATC-AA--------------C----CAG--------------------------GAGC----CTTGGCAT-----
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                 180 38 -     36483 TT-AGATATGAAGTAATAATC-AA--------------C----CAG--------------------------GAGC----CTTGGCAT-----
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_743489                               3246 38 -     45847 TT-AGATATGAAGTAATAATC-AA--------------C----CAG--------------------------GAGC----CTTGGCAT-----
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                24456 38 +     25266 TT-AGATATGAAGTAATAATC-AA--------------C----CAG--------------------------GAGC----CTTGGCAT-----
i Alouatta_juara.k141_1509701                            I 38 C 0
s Alouatta_macconnelli.k141_918386                             181 38 -      9457 TT-AGATATGAAGTAATAATC-AA--------------C----CAG--------------------------GAGC----CTTGGCAT-----
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_3472759                            17752 38 -     18578 TT-AGATATGAAGTAATAATC-AA--------------C----CAG--------------------------GAGC----CTTGGCAT-----
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              3151 38 +     47717 TT-AGATATGAAGTAATAATC-AA--------------C----CAG--------------------------GAGC----CTTGGCAT-----
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             3251 38 -      3544 TT-AGATATGAAGTAATAATC-AA--------------C----CAG--------------------------GAGC----CTTGGCAT-----
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             14475 38 +     50774 TT-AGATATGAAGTAATAATC-AA--------------C----CAG--------------------------GAGC----CTTGGCAT-----
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184655 38 +    412891 TT-AGACATGACTTCATAATC-AA--------------C----CA---T-----------------------GAGA----CCAGGTTC-----
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 7
s Aotus_azarae.k141_3104676                                  15095 38 -     33861 TT-AGATATGAAGTAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGGCAT-----
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            15115 38 -     34016 TT-AGATATGAAGTAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGGCAT-----
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297512 38 -   5030052 TT-AGATATGAAGTAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGGCAT-----
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             15117 38 -     34685 TT-AGATATGAAGTAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGGCAT-----
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28241 38 -     47192 TT-AGATATGAAGTAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGGCAT-----
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      12258 38 +     20879 TT-ACATATGGCATTATAATC-AA--------------C----CA---T-----------------------GAGC----TTTGGTGC-----
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 7
s Arctocebus_calabarensis.k141_2318572                       11226 25 +     14667 TT-AGGTATGAAATCATAATT-GT--------------C----CA------------------------------------------------
i Arctocebus_calabarensis.k141_2318572                   C 0 I 9
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4062 38 +     43469 TT-AGACACGACTTCATAATC-AA--------------C----TA---T-----------------------GAGA----CCAGGTTC-----
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 7
s Avahi_laniger.k141_765380                                  53387 22 -     92717 TT-AAATGCGACATCATAATC-GA---------------------------------------------------------------------
i Avahi_laniger.k141_765380                              C 0 I 9
s Avahi_peyrierasi.k141_1424874                              54014 22 +     85213 TT-AAATGTGACATCATAATC-GA---------------------------------------------------------------------
i Avahi_peyrierasi.k141_1424874                          C 0 I 9
s Callibella_humilis.k141_1278103                             4850 38 -     10423 TT-AGATATGAAGTAACAGTC-AG--------------C----CAT--------------------------GAGC----CTTGGCAT-----
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             24322 38 +     31915 TT-AGGTATGAAGTAACAGCC-AG--------------C----CAT--------------------------GAGC----CTTGGCAT-----
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            4816 38 +      5267 TT-AGATATGAAGTAACAGTC-AG--------------C----CAT--------------------------GAGC----CTTGGCAT-----
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590030 38 - 189096842 TT-AAATATGAAGTAACAGTC-AG--------------C----CAT--------------------------GAGC----CTTGGCAT-----
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             11561 38 -     12001 TT-AGATATGAAGTAACAGTC-AG--------------C----CAT--------------------------GAGC----CTTGGCAT-----
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10001950 38 -  17673402 TT-AGATGTGACTTCAGAATC-AA--------------C----CA--------------C------------GAGA----CCAGGTCt-----
i Camelus_bactrianus.KN276810.1                          C 0 I 7
s Camelus_dromedarius.KN272107.1                           2334408 38 -   7040546 TT-AGATGTGACTTCAGAATC-AA--------------C----CA--------------C------------GAGA----CCAGGTCt-----
i Camelus_dromedarius.KN272107.1                         C 0 I 7
s Camelus_ferus.KB017975.1                                  402691 38 -   1652518 TT-AGATGTGACTTCAGAATC-AA--------------C----CA--------------C------------GAGA----CCAGGTCt-----
i Camelus_ferus.KB017975.1                               C 0 I 7
s CanFam4.chr16                                           17798762 38 -  60362399 TT-AAATGTGACTTCATAATT-AA--------------C----CA---T-----------------------GAGA----CCAGATGC-----
i CanFam4.chr16                                          C 0 I 7
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184819 38 -    185531 TT-AAATGTGACTTCATAATT-AA--------------C----CA---T-----------------------GAGA----CCAGATGC-----
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 I 7
s Canis_lupus_dingo.QKWQ01000480.1                         9034205 38 -   9314153 TT-AAATGTGACTTCATAATT-AA--------------C----CA---T-----------------------GAGA----CCAGATGC-----
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 7
s Canis_lupus_familiaris.chr16                            17958470 38 -  59632846 TT-AAATGTGACTTCATAATT-AA--------------C----CA---T-----------------------GAGA----CCAGATGC-----
i Canis_lupus_familiaris.chr16                           C 0 I 7
s Canis_lupus_orion.HG994398.1                            18499982 38 +  63665305 TT-AAATGTGACTTCATAATT-AA--------------C----CA---T-----------------------GAGA----CCAGATGC-----
i Canis_lupus_orion.HG994398.1                           C 0 I 7
s Carlito_syrichta.NW_007247396.1                           201025 37 +    308752 TT-AGATGTGCCATCATAATC-AA--------------C----CA---------------------------GATC----CTCAGTGC-----
i Carlito_syrichta.NW_007247396.1                        I 9 I 10
s Carollia_perspicillata.CarPer_scaffold_92756                4425 38 -     11696 TT-AGACACAACTTCATAATC-AA--------------C----TA--------------C------------GAGA----GCAGGTTC-----
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 7
s Castor_canadensis.CasCan_scaffold_2074                    136758 35 +    179628 ----AATATGACATAATAACC-AA--------------C----TG---T-----------------------GAAC----CTCAATGT-----
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 7
s Catagonus_wagneri.CatWag_scaffold_2839                     92586 38 +    217609 TT-ATATATGACTTCATAATC-AA--------------C----TA--------------C------------GAGA----CCAGGTGT-----
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 7
s Cebuella_niveiventris.k141_1251222                          9475 38 -     11392 TT-AGATATGAAGTAACAGTC-AG--------------C----CAT--------------------------GAGC----CTTGGCAT-----
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               5573 38 -      7577 TT-AGATATGAAGTAACAGTC-AG--------------C----CAT--------------------------GAGC----CTTGGCAT-----
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25651604 37 +  26074798 TT-AGATATGAAATAA-AATC-AG--------------C----CAG--------------------------GAGC----CTTGGCAT-----
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_398305                                 1180 37 +      1777 TT-AGATATGAAATAA-AATC-AG--------------C----CAG--------------------------GAGC----CTTGGCAT-----
i Cebus_olivaceus.k141_398305                            C 0 C 0
s Cebus_unicolor.k141_544048                                 49517 37 -     74725 TT-AGATATGAAATAA-AATC-AG--------------C----CAG--------------------------GAGC----CTTGGCAT-----
i Cebus_unicolor.k141_544048                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         5031 37 +     31688 TT-AGATGTGCCATCGTAATC-AA--------------C----CA---------------------------GAGC----CTCAGTGC-----
i Cephalopachus_bancanus.k141_1423433                    I 9 I 10
s Ceratotherium_simum.JH767749.1                          12231013 38 +  27778364 TT-AGATCTGACTTTATAATC-AC--------------C----TA---T-----------------------GAGA----CCAGGTGC-----
i Ceratotherium_simum.JH767749.1                         C 0 I 7
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2040 38 -     25243 TT-AGATCTGACTTTATAATC-AC--------------C----TA---T-----------------------GAGA----CCAGGTGC-----
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 I 7
s Cercocebus_atys.KQ010504.1                               4475218 43 +   4669795 TT-AGAGATGACATAGTAATC-AA--------------C----CAT--------------------------GAGC----CTGGATGTGTGGG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        13763 43 -     19203 TT-AGAGACGACATAGTAATC-AA--------------C----CAT--------------------------GAGC----CTGGATGTGTGGG
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3342297                            379 43 -     14043 TT-AGAGACGACATAGTAATC-AA--------------C----CAT--------------------------GAGC----CTGGATGTGTGTG
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           8415 43 +     27781 TT-AGAGACGACATAGTAATC-AA--------------C----CAT--------------------------GAGC----CTGGATGTGTGGG
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         8580 43 -     20310 TT-AGAGACGACATAGTAATC-AA--------------C----CAT--------------------------GAGC----CTGGATGTGTGGG
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          11559 43 +     29689 TT-AGAGACGACATAGTAATC-AA--------------C----CAT--------------------------GAGC----CTGGATGTGTGGG
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            6313 43 -     20078 TT-AGAGACGACGTAGTAATC-AA--------------C----CAT--------------------------GAGA----CTTGATGTGTGGG
i Cercopithecus_diana.k141_1150327                       I 14 C 0
s Cercopithecus_hamlyni.k141_187466                          14238 43 -     27936 TT-AGAGACGACATAGTAATC-AA--------------C----CAT--------------------------GAGC----CTGGATGTGTGGG
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            3104 42 -     17152 TT-AGAGAC-ACATAGTAATC-AA--------------C----CAT--------------------------GAGC----CTGGATGTGTGGG
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38816639 43 +  39242232 TT-AGAGACGACATAGTAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222333 43 -  21565898 TT-AGAGACAACATAGTAATC-AA--------------C----CAT--------------------------GAGC----CTGGATGTGTGGG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       39451 43 -     53127 TT-AGAGACAACATAGTAATC-AA--------------C----CAT--------------------------GAGC----CTGGATGTGTGGG
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        6718 43 +      7159 TT-AGAGACGACATAGTAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14250 43 -     27947 TT-AGAGATGACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Cercopithecus_petaurista.k141_807961                   I 14 C 0
s Cercopithecus_pogonias.k141_822820                         14227 43 +     17596 TT-AGAGACAACATAGTAATC-AA--------------C----CAT--------------------------GAGC----CTAGATGTGTGGG
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                           272 43 +     14005 TT-AGAGACGACATAGTAATC-AA--------------C----CAT--------------------------GAGA----CTTGATGTGTGGG
i Cercopithecus_roloway.k141_2581234                     I 14 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_713168            2035 35 -      2554 TT-AGCTGTGAC-TCATAACC-AA--------------C----CT---T-----------------------G--A----CTAGGTGC-----
i Chaetophractus_vellerosus.ChaVel_scaffold_713168       C 0 N 0
s Cheirogaleus_major.k141_333249                             20766 22 -     52598 TT-AGCTATGACATCATAATC-GG---------------------------------------------------------------------
i Cheirogaleus_major.k141_333249                         C 0 I 9
s Cheirogaleus_medius.k141_1055463                           16131 22 +     57038 TT-AGCTATGACATCATAATT-GA---------------------------------------------------------------------
i Cheirogaleus_medius.k141_1055463                       C 0 I 9
s Chiropotes_albinasus.k141_2813271                          10727 38 +     11226 TT-AGATATGAACTAACAGTC-AA--------------C----CAT--------------------------GAGC----GTTGGCGT-----
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18428209 43 -  18827391 TT-AGAGACAACATAGTAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       14646 43 -     50209 TT-AGAGACGACATAGTAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135421646 43 + 135778131 TT-AGAGACGACATAGTAATC-AA--------------C----CGT--------------------------GAGC----CTTGATGTGTGGG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 17453 36 +     19366 TT-AAATATGACTTACAAAAC-AA--------------C----CT---T-----------------------G--A----TTAGGTGC-----
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 I 477
s Choloepus_hoffmanni.KN194906.1                            172550 36 +    839153 TT-AAATACGACTTACAAAAc-aa--------------c----ct--------------------------tg--a----ttaggtgc-----
i Choloepus_hoffmanni.KN194906.1                         C 0 I 455
s Colobus_angolensis.KN981557.1                            1910151 43 +   2368649 TT-AGAGACAACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_polykomos.k141_906115                              36689 43 +     84244 TT-AGAGACGACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17547685 37 -  53390261 TT-AGATTTGATTCCCTAAT--CA--------------C----TA---T-----------------------GAGA----CAAGGTGC-----
i Condylura_cristata.JH655891.1                          C 0 I 7
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14001 38 -     20389 GT-AGATATGACTTTATAATT-AA--------------C----TA---T-----------------------AAGA----CCAGGTGC-----
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 7
s Cricetomys_gambianus.CriGam_scaffold_18520                 49763 38 +     63868 TT-AGATAAGACACCATAATC-AG--------------C----CA---T-----------------------AAGC----ACTGTTGC-----
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 13
s Cricetulus_griseus.LT883664.1                           11667257 38 + 224834208 TT-AGATATTACACAATAATC-AG--------------C----CA---T-----------------------AAGC----CTCAGTGC-----
i Cricetulus_griseus.LT883664.1                          C 0 I 13
s Crocidura_indochinensis.CroInd_scaffold_37019               2584 36 -     19598 TT-AGATATGACTCCTTAATA-AA--------------A----AA---T-----------------------GAGC----CCAACT-------
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 I 4
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28073 38 -     87169 TT-AGATATGACTTTATAATC-AA--------------C----CA-G-------------------------GAGA----CCAGATGC-----
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 7
s Ctenodactylus_gundi.CteGun_scaffold_65                    836765 38 +   1526836 TT-AGATATGACATTATAGCC-TA--------------C----CA---T-----------------------GACC----CTTCATGC-----
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 7
s Dasypus_novemcinctus.JH564415.1                            62704 36 +   2246927 TT-AGCTATGGCTTCATAACC-AA--------------C----CT---T-----------------------G--A----TTGGGTGC-----
i Dasypus_novemcinctus.JH564415.1                        C 0 I 437
s Daubentonia_madagascariensis.ctg71                      12536987 30 -  12879189 ----------ACATCGTAATG-GACCATGGGCTCAGGTT----CA------------------------------------------------
i Daubentonia_madagascariensis.ctg71                     C 0 I 9
s Desmodus_rotundus.KZ672289.1                             8629439 38 +  20541912 TT-AGACACGACTTCATAGTC-AA--------------C----TA---T-----------------------GAGA----CCAGGTGC-----
i Desmodus_rotundus.KZ672289.1                           C 0 I 7
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672864 38 +   1390856 TT-AGATCTGACTTCATAATC-AA--------------C----TA---T-----------------------GAGA----CCAGGTGC-----
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 7
s Diceros_bicornis.DicBicMic_scaffold_5955                    5616 38 +    198055 TT-AGATCTGACTTTATAATC-AC--------------C----TA---T-----------------------GAGA----CCAGGTGC-----
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 7
s Echinops_telfairi.JH980293.1                            48780007 34 + 111700974 -----CTATGACTTCATAATC-CA--------------C----CC---T-----------------------GAGA----CCAGGTGT-----
i Echinops_telfairi.JH980293.1                           C 0 I 7
s Eidolon_helvum.KE759718.1                                  10111 38 +     11740 TT-ATATATGACTTCATAATC-AA--------------C----TA---T-----------------------GAGA----TGAGGTAT-----
i Eidolon_helvum.KE759718.1                              C 0 I 7
s Elephantulus_edwardii.JH947257.1                         1097304 38 +  10337057 TT-AGCTACGACTCTGTAATC-AA--------------C----CT---T-----------------------GAGA----CCAGGTGC-----
i Elephantulus_edwardii.JH947257.1                       C 0 I 7
s Ellobius_lutescens.LOEQ01008920.1                          19998 38 -    110024 TT-AGATAGGACACCATTTCT-AG--------------T----CA---T-----------------------AAGT----TTGGGTGC-----
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 13
s Ellobius_talpinus.LOJH01109367.1                            6086 38 -      6299 TT-AGATAGGACACCATTTCT-AG--------------T----CA---T-----------------------AAGT----TTGGGTGC-----
i Ellobius_talpinus.LOJH01109367.1                       C 0 N 0
s Enhydra_lutris.KZ291758.1                               16328900 38 -  41312741 TC-AGATATGACTCCATAATC-AA--------------C----CA---T-----------------------GAGA----CCCGATGT-----
i Enhydra_lutris.KZ291758.1                              C 0 I 7
s Eptesicus_fuscus.JH977646.1                              2145023 38 -  14770903 TT-AGATCTGACTTCATCATC-AA--------------C----TA---T-----------------------GAGA----CCAGGTGC-----
i Eptesicus_fuscus.JH977646.1                            C 0 I 7
s Equus_asinus.JREZ01000139.1                              1283134 38 +   4378816 TT-AGATATGACTTCATAATC-AA--------------C----TA---T-----------------------GAGA----GTAGGTGC-----
i Equus_asinus.JREZ01000139.1                            C 0 I 7
s Equus_caballus.CM000403.2                               18530954 38 -  39960074 TT-AGATATGACTTCATAATC-AA--------------C----TA---T-----------------------GAGA----GTAGGTGC-----
i Equus_caballus.CM000403.2                              C 0 I 7
s Equus_przewalskii.KK951119.1                               32983 38 +    498745 TT-AGATATGACTTCATAATC-AA--------------C----TA---T-----------------------GAAA----GTAGGTGC-----
i Equus_przewalskii.KK951119.1                           C 0 I 7
s Erinaceus_europaeus.JH835339.1                           3327417  9 -   7059049 ---------------------------------------------------------------------------A----CAATATGG-----
i Erinaceus_europaeus.JH835339.1                         I 627 I 7
s Erythrocebus_patas.Contig38                             21204816 43 -  21539334 TT-AGAGACGACATAGTAATC-AA--------------C----CAT--------------------------GAGC----CTGGATGTGTGGG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13491 22 -     14127 TT-AGCTATGACGTCATAATC-GA---------------------------------------------------------------------
i Eulemur_albifrons.k141_342033                          C 0 I 9
s Eulemur_collaris.k141_377015                                6192 22 -     16928 TT-AGCTATGACGTCATAATC-GA---------------------------------------------------------------------
i Eulemur_collaris.k141_377015                           C 0 I 9
s Eulemur_coronatus.k141_885031                              15218 22 -     25546 TT-AGCTATGACGTCATAATC-GA---------------------------------------------------------------------
i Eulemur_coronatus.k141_885031                          C 0 I 9
s Eulemur_flavifrons.k141_1184614                            12422 22 +     26330 TT-AGCTATGACGTCATAATT-GA---------------------------------------------------------------------
i Eulemur_flavifrons.k141_1184614                        C 0 I 9
s Eulemur_fulvus.k141_544389                                 13655 22 +     23973 TT-AGCTATGACGTCATAATC-GA---------------------------------------------------------------------
i Eulemur_fulvus.k141_544389                             C 0 I 9
s Eulemur_macaco.k141_1562045                                12419 22 +     75513 TT-AGCTATGACGTCATAATC-GA---------------------------------------------------------------------
i Eulemur_macaco.k141_1562045                            C 0 I 9
s Eulemur_mongoz.k141_232305                                 10350 22 +     97555 TT-AGCTATGACGTCATAATC-GA---------------------------------------------------------------------
i Eulemur_mongoz.k141_232305                             C 0 I 9
s Eulemur_rubriventer.k141_571033                            13281 22 +     26496 TT-AGCTATGACGTCATAATC-GA---------------------------------------------------------------------
i Eulemur_rubriventer.k141_571033                        C 0 I 9
s Eulemur_rufus.k141_1476633                                  3891 22 -     17153 TT-AGCTATGACGTCATAATC-GA---------------------------------------------------------------------
i Eulemur_rufus.k141_1476633                             C 0 I 9
s Eulemur_sanfordi.k141_1122526                              13466 22 +    111500 TT-AGCTATGACGTCATAATC-GA---------------------------------------------------------------------
i Eulemur_sanfordi.k141_1122526                          C 0 I 9
s Felis_catus.CM001381.2                                  20236565 38 + 206538554 tt-agatATGACTTTACAATC-AA--------------C----CA---T-----------------------GAGA----CCAGATGC-----
i Felis_catus.CM001381.2                                 C 0 I 7
s Felis_catus_fca126.CM031415.1                           20195408 38 + 205367284 tt-agatATGACTTTACAATC-AA--------------C----CA---T-----------------------GAGA----CCAGATGC-----
i Felis_catus_fca126.CM031415.1                          C 0 I 7
s Felis_nigripes.FelNig_flattened_line_20823                  8922 38 -     36744 TT-AGATATGACTTTACAATC-AA--------------C----CA---T-----------------------GAGA----CCAGATGC-----
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 7
s Galago_moholi.ctg2040                                     426360 25 -    453645 TT-AGTTATGAAATCATAATT-GC--------------T----CA------------------------------------------------
i Galago_moholi.ctg2040                                  C 0 I 9
s Galago_senegalensis.k141_631886                             4051 25 +     11339 TT-AGTTATGAAATCATAATT-GC--------------T----CA------------------------------------------------
i Galago_senegalensis.k141_631886                        C 0 I 9
s Galagoides_demidoff.k141_1711393                            1365 25 +     41679 TT-AGTTATGAAATCATAATT-GC--------------T----CA------------------------------------------------
i Galagoides_demidoff.k141_1711393                       C 0 I 9
s Galeopterus_variegatus.GalVar_scaffold_108840                818 18 -      9135 TT-ATATATGACATCATAA--------------------------------------------------------------------------
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 I 22
s Gorilla_beringei.k141_3596273                              15596 43 -     32273 TC-AGATATGACATAATAATC-AA--------------C----TAT--------------------------GAAC----CTTGGTGTGTGGG
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186337742 43 + 186649187 TC-AGATATGACATAATAATC-AA--------------C----TAT--------------------------GAAC----CTTGGTGTGTGGG
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6537 22 -     19426 TT-AGCTATGATGTCATAGTC-GA---------------------------------------------------------------------
i Hapalemur_alaotrensis.k141_170648                      C 0 I 9
s Hapalemur_gilberti.k141_488810                             11686 22 -     15286 TT-AGCTATGACGTCATAGTC-GA---------------------------------------------------------------------
i Hapalemur_gilberti.k141_488810                         C 0 I 9
s Hapalemur_griseus.k141_1511508                             13325 22 +     18253 TT-AGCTATGACGTCATAGTC-GA---------------------------------------------------------------------
i Hapalemur_griseus.k141_1511508                         C 0 I 9
s Hapalemur_meridionalis.k141_248335                         13426 22 -     41752 TT-AGCTATGATGTCATAGTC-GA---------------------------------------------------------------------
i Hapalemur_meridionalis.k141_248335                     C 0 I 9
s Hapalemur_occidentalis.k141_907772                         13263 22 -     16460 TT-AGCTATGACGTCATAGTC-GA---------------------------------------------------------------------
i Hapalemur_occidentalis.k141_907772                     C 0 I 9
s Helogale_parvula.HelPar_flattened_line_2585               241908 38 +    327341 TT-AGAAATGACTTTATAATC-AA--------------C----CA-G-------------------------GAGA----CCAGATGC-----
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 7
s Heterohyrax_brucei.HetBruBak_scaffold_122365                 475 41 +      7595 TG-AGCCAGGGCTTCAGAACC-CA--------------C----CT---T-----------------------GA-ATCAGCCAGGTGC-----
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 I 7
s Hoolock_leuconedys.ctg274                                    434411 26 +    630532 TC-AGATATGACATAATAATA-TC--------------A----TAT-----------------------------------------------
i Hoolock_leuconedys.ctg274                                 C 0 I 14
s Hyaena_hyaena.HyaHya_flattened_line_26932                  44320 63 +     55795 TT-AGATATGACTTTATAATC-AA--------------C----CA-GATTATAGGGTTTCAACCAGATTATAGAGA----CCAGATAC-----
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 7
s Hylobates_agilis.k141_232023                                2177 26 -     12752 TC-AGATATGACATAATAATA-TC--------------A----TAT-----------------------------------------------
i Hylobates_agilis.k141_232023                           C 0 I 14
s Hylobates_klossii.k141_240831                               2221 26 +     14092 TC-AGATATGACATAATAATA-TC--------------A----TAT-----------------------------------------------
i Hylobates_klossii.k141_240831                          C 0 I 14
s Hylobates_pileatus_b.LG02                                     189543004 26 - 191637585 TC-AGATATGACATAATAATA-TC--------------A----TAT-----------------------------------------------
i Hylobates_pileatus_b.LG02                                     C 0 I 14
s Hylobates_pileatus_a.tarseq_633                            3335899 26 -  11177569 TC-AGATATGACATAATAATA-TC--------------A----TAT-----------------------------------------------
i Hylobates_pileatus_a.tarseq_633                          C 0 I 14
s Ictidomys_tridecemlineatus.JH393364.1                    7520557 42 -   7955117 TA-ACAAGTAACACCATAATT-AA--------------CACCATA---T-----------------------GAGC----TTTGGTGC-----
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 7
s Jaculus_jaculus.JH725527.1                               8276541 15 -   9596543 -------------------------------------------CA---T-----------------------GAAC----CACAGTCC-----
i Jaculus_jaculus.JH725527.1                             C 0 I 7
s Indri_indri.k141_3655594                                   22208 22 +     31101 TT-AAATATGACATCATAATT-GA---------------------------------------------------------------------
i Indri_indri.k141_3655594                               C 0 I 9
s Lasiurus_borealis.LasBor_scaffold_32767                    13440 39 -     42476 TTAAGATCTGACTTCATCACC-AA--------------C----TA---T-----------------------GAGA----CCAGGTGC-----
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 7
s Lemur_catta.scaffold_24                                 15523770 22 -  30322482 TT-AGCTATGACGTCATAGTC-GA---------------------------------------------------------------------
i Lemur_catta.scaffold_24                                C 0 I 9
s Leontocebus_fuscicollis.k141_1820339                        7113 37 +     64341 TT-AGATATGAACTAACAGTC-AA--------------C----CAT--------------------------GAGC----CTTG-CGT-----
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           4436 37 +      4941 TT-AGATATGAACTAACAGTC-AA--------------C----CAT--------------------------GAGC----CTTG-CGT-----
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        7154 37 +     35603 TT-AGATATGAACTAACAGTC-AA--------------C----CAT--------------------------GAGC----CTTG-CAT-----
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    28625 38 +     38576 TT-AGATGTGAAGTAATAGTC-AA--------------G----CAT--------------------------GAGC----CTTGGCAT-----
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         25322 38 +     66356 TT-AGATGTGAAGTAATAGTC-AA--------------G----CAT--------------------------GAGC----CTTGGCAT-----
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         10668 22 -     23766 TT-AGCTATGACATCATAATC-GA---------------------------------------------------------------------
i Lepilemur_ankaranensis.k141_596936                     C 0 I 9
s Lepilemur_dorsalis.k141_577674                             28729 22 +     45836 TT-AGCTATGACATCATAATC-GA---------------------------------------------------------------------
i Lepilemur_dorsalis.k141_577674                         C 0 I 9
s Lepilemur_ruficaudatus.k141_121139                          1266 22 +     25010 TT-AGCTATGACATCATAATC-GA---------------------------------------------------------------------
i Lepilemur_ruficaudatus.k141_121139                     C 0 I 9
s Lepilemur_septentrionalis.k141_185316                      26665 22 +     54090 TT-AGCTATGACATCATAATC-GA---------------------------------------------------------------------
i Lepilemur_septentrionalis.k141_185316                  C 0 I 9
s Leptonychotes_weddellii.KB714746.1                       3042428 38 +   3914936 tt-agatATGACTCCATAATC-AA--------------C----AA---T-----------------------GAGA----CCAGATGC-----
i Leptonychotes_weddellii.KB714746.1                     C 0 I 7
s Lepus_americanus.LepAme_scaffold_107385                     6097 38 -     14121 TT-GGATATGACATCATAATT-AG--------------C----CA---T-----------------------GACC----CTTAATGT-----
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 7
s Lophocebus_aterrimus.ctg367                              1436765 43 +   1826925 TT-AGAGACGACATAGTAATC-AA--------------C----CAT--------------------------GAGC----CTGGATGTGTGGG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5608 25 +     11245 TT-AGTTATGAAATCATAATC-AC--------------C----CA------------------------------------------------
i Loris_lydekkerianus.k141_2539221                       C 0 I 9
s Loris_tardigradus.ctg83                                  1004428 25 +   6120653 TT-AGTTATGAAATCATAATC-AC--------------C----CA------------------------------------------------
i Loris_tardigradus.ctg83                                C 0 I 9
s Loxodonta_africana.GL010049.1                            4216914 42 -  43346337 TT-AGCTATGACTTCATAATC-AA--------------A----CT---T-----------------------GAGATCTGCCAGGTGC-----
i Loxodonta_africana.GL010049.1                          C 0 I 7
s Lycaon_pictus.CM007581.1                                17954710 38 -  59628241 TT-AAATGTGACTTCATAATT-AA--------------C----CA---T-----------------------GAGA----CCAGATGC-----
i Lycaon_pictus.CM007581.1                               C 0 I 7
s Macaca_arctoides.k141_2326796                               6575 43 +     40492 TT-AGAGACGACATAGTAATC-AA--------------C----CAT--------------------------GAGC----CTGGATGTGTGGG
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59675834 43 +  60120075 TT-AGAGACGACATAGTAATC-AA--------------C----CAT--------------------------GAGC----CTGGATGTGTGGG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 12347 43 -     26193 TT-AGAGACGACATAGTAATC-AA--------------C----CAT--------------------------GAGC----CTGGATGTGTGGG
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            80131 43 -    114318 TT-AGAGACGACATAGTAATC-AA--------------C----CAT--------------------------GAGC----CTGGATGTGTGGG
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  5822 43 -     23192 TT-AGAGACGACATAGTAATC-AA--------------C----CAT--------------------------GAGC----CTGGATGTGTGGG
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                15291 43 -     29190 TT-AGAGACGACATAGTAATC-AA--------------C----CAT--------------------------GAGC----CTGGATGTGTGGG
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  23856 43 +     37952 TT-AGAGACAACATAGTAATC-AA--------------C----CAT--------------------------GAGC----CTGGATGTGTGGG
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186838945 43 + 187317192 TT-AGAGACGACATAGTAATC-AA--------------C----CAT--------------------------GAGC----CTGGATGTGTGGG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25457508 43 -  25927173 TT-AGAGACGACATAGTAATC-AA--------------C----CAT--------------------------GAGC----CTGGATGTGTGGG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  79704 43 +     89720 TT-AGAGACGACATAGTAATC-AA--------------C----CAT--------------------------GAGC----CTGGATGTGTGGG
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 6705 43 +     20474 TT-AGAGACGACATAGTAATC-AA--------------C----CAT--------------------------GAGC----CTGGATGTGTGGG
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   6505 43 -     14993 TT-AGAGACGACATAGTAATC-AA--------------C----CAT--------------------------GAGC----CTGGATGTGTGGG
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  329371 43 -    668171 TT-AGAGACGACATAGTAATC-AA--------------C----CAT--------------------------GAGC----CTGGATGTGTGGG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 4821 43 -     24072 TT-AGAGACGACATAGTAATC-AA--------------C----CAT--------------------------GAGC----CTGGATGTGTGGG
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               25443 43 -     45290 TT-AGAGACGACATAGTAATC-AA--------------C----CAT--------------------------GAGC----CTGGATGTGTGGG
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90208 38 +     94391 TT-ATATATGGCTTCATAATC-AG--------------C----TA--------------C------------AAGA----TTAGGTAC-----
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 7
s Mandrillus_leucophaeus.scaffold280                      23937038 43 -  24302211 TT-AGAGACGACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               351166 43 +    752769 TT-AGAGACGACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33102741 42 -  40650429 TA-ACATGTAACACCATAATT-AA--------------CACCATA---T-----------------------GAGC----TTTGGTGC-----
i Marmota_marmota.CZRN01000018.1                         C 0 I 7
s Megaderma_lyra.MegLyr_scaffold_4542                         9916 38 -    207569 TT-AGATATGACTTTATAATC-CA--------------C----TA---T-----------------------GAGA----CCAGGTGT-----
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 7
s Mellivora_capensis.MelCap_flattened_line_69365              9617 38 +     13704 TT-AGATACGACTCCATAATC-AA--------------C----CA---T-----------------------GAGA----CCAGATGC-----
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 7
s Meriones_unguiculatus.MerUng_scaffold_7390                 32438 38 +    140813 TT-GGATATGACACCATAAAC-AG--------------C----CA--------------C------------AGGC----ATTGGTGC-----
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 13
s Mesocricetus_auratus.KB708134.1                         12181935 38 -  29670104 TT-AGGTATGACACCATAATC-AG--------------C----CA---T-----------------------AAGC----CTTGGTAC-----
i Mesocricetus_auratus.KB708134.1                        C 0 I 13
s Mico_argentatus.k141_1239457                                5390 38 -      7380 TT-AGATATGAAGTAACAGTC-AG--------------C----CAT--------------------------GAGC----CTTGGCAT-----
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               4463 38 +     18990 TT-AGATATGAAGTAGCAGTC-AG--------------C----CAT--------------------------GAGC----CTTGGCAT-----
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      5402 38 -      7356 TT-AGATATGAAGTAACAGTC-AG--------------C----CAT--------------------------GAGC----CTTGGCAT-----
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18291190 22 -  93316391 TT-AGCTATGACGTCATAATC-GG---------------------------------------------------------------------
i Microcebus_murinus.CM007674.1                          C 0 I 9
s Microgale_talazaci.MicTal_scaffold_6613                    21740 38 -    145209 TT-AACTATGACTTCATAATC-CA--------------C----CT---T-----------------------GAGA----CTAAGTGT-----
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 7
s Micronycteris_hirsuta.MicHir_scaffold_52381                14980 38 -     19307 TG-AGACACGACTTCATAGTC-AA--------------C----TA---T-----------------------GAGA----GCAGGTGC-----
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 7
s Miniopterus_natalensis.LDJU01000034.1                    1850216 38 +   8254450 tt-agaCACGACTTCATGATC-CA--------------C----TA---T-----------------------GAGA----CCAGGCTC-----
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 7
s Miniopterus_schreibersii.MinSch_scaffold_18080             33893 38 +     64694 TT-AGACACGACTTCATGATC-CA--------------C----TA---T-----------------------GAGA----CCAGGCTC-----
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 7
s Miopithecus_ogouensis.k141_534055                           8764 43 -     28506 GT-AGAGATGACATAGTAATC-AA--------------C----CAT--------------------------GAGC----CTGGATGTGTGGG
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         5296 38 -      8324 TT-AGATATGACTCCATAATC-AA--------------C----AA---T-----------------------GAGA----CCAGATGC-----
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 7
s Mirza_zaza.k141_952172                                      8735 22 -     37649 TT-AGCTATGATGTCATAATC-GG---------------------------------------------------------------------
i Mirza_zaza.k141_952172                                 C 0 I 9
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140923 38 -    366855 TT-AGACATGACTTCATAATC-AA--------------C----TG---T-----------------------GAGA----ACAGGTGC-----
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 7
s Mungos_mungo.MunMun_flattened_line_23663                   35007 38 +     37127 TT-AGAGATGACTTTATAATC-AA--------------C----CA--A------------------------AAGA----CCAGATGC-----
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 7
s Murina_feae.MurFea_scaffold_85699                           6087 38 +     14753 TT-ATATCTGACTTCATCATC-AA--------------C----TA---T-----------------------GAGA----CCAGGTGC-----
i Murina_feae.MurFea_scaffold_85699                      C 0 I 7
s Mus_caroli.LT608237.1                                   84361055 38 - 120012414 TT-GGATATGACACCATAAAC-AA--------------C----CA---T-----------------------AAGC----GTTGCTGC-----
i Mus_caroli.LT608237.1                                  C 0 I 13
s Mus_musculus.chr8                                       87650053 38 - 129401213 TT-GGATATGACACCATAAAC-AA--------------C----CA---T-----------------------AAGC----GTTGCTGC-----
i Mus_musculus.chr8                                      C 0 I 13
s Mus_pahari.LT608297.1                                   31354709 38 -  89631738 TT-CGATATGACACCATAAAC-AA--------------C----CA---T-----------------------AAGC----GTTGCTGC-----
i Mus_pahari.LT608297.1                                  C 0 I 13
s Mus_spretus.CM004101.1                                  90752114 38 - 130317789 TT-GGACATGACACCATAAAC-AA--------------C----CG---T-----------------------AAGC----ATTGCTGC-----
i Mus_spretus.CM004101.1                                 C 0 I 13
s Mustela_putorius.JH418006.1                               300801 38 -  14710649 tt-agaTATGACTCCATAATC-AA--------------C----CA---T-----------------------GAGA----GCAGATGC-----
i Mustela_putorius.JH418006.1                            C 0 I 7
s Myotis_brandtii.KE162005.1                                279259 38 -  10118263 TT-AGATCTGACTTCATCATC-AA--------------C----TA---T-----------------------GAGA----CCAGGTAC-----
i Myotis_brandtii.KE162005.1                             C 0 I 7
s Myotis_davidii.KB100139.1                                1586952 38 -   6019432 TT-AGATCTGACTTCATCATC-AA--------------C----TA---T-----------------------GAGA----CCAGGTAC-----
i Myotis_davidii.KB100139.1                              C 0 I 7
s Myotis_lucifugus.GL429869.1                              3903024 38 -   4330536 TT-AGATCTGACTTCATCATC-AA--------------C----TA---T-----------------------GAGA----CCAGGTAC-----
i Myotis_lucifugus.GL429869.1                            C 0 I 7
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              188351 36 +    196477 TT-GCATATGACTTCATAATC-AA--------------C----CT--------------C------------G--A----TTAGGCAC-----
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 I 499
s Nannospalax_galili.KL204047.1                            2033770 33 -   3037898 TT-AAACATGACACCATTATA-AG--------------C----CA---T-----------------------GACC----TTT----------
i Nannospalax_galili.KL204047.1                          I 243 I 4
s Nasalis_larvatus.k141_413338                               14738 43 +     21681 TT-AGAGACGACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306550 38 +  31847680 tt-agatATGACTCCATAATC-AA--------------C----AA---T-----------------------GAGA----CCAGATGC-----
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 7
s Nyctereutes_procyonoides.CAJHUB010000658.1               9148964 38 -   9404916 TT-AAATATGACTTCATAATT-AA--------------C----CA---T-----------------------GAAA----CCAGATAC-----
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 7
s Nycticebus_bengalensis.LG01                            102579400 25 - 196305487 TT-AGTTATGAAATCATAATC-AC--------------C----CA------------------------------------------------
i Nycticebus_bengalensis.LG01                            C 0 I 9
s Nycticebus_coucang.k141_771082                              1245 25 -      2667 TT-AGTTATGAAATCATAATC-AC--------------C----CA------------------------------------------------
i Nycticebus_coucang.k141_771082                         C 0 I 9
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749828 25 + 199412804 TA-AGTTATGAAATCATAATC-AC--------------C----CA------------------------------------------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 9
s Ochotona_princeps.JH802162.1                             1363330 33 +   3988456 CC-AAGTACGATAGCA------AG--------------A----TA---T-----------------------GACC----TTTGGTGT-----
i Ochotona_princeps.JH802162.1                           C 0 I 7
s Odobenus_rosmarus.KB229312.1                              506235 38 -   2017862 tt-agatATGACTCCATAATC-AA--------------C----AA---T-----------------------GAGA----CCAGATGC-----
i Odobenus_rosmarus.KB229312.1                           C 0 I 7
s Ondatra_zibethicus.OndZib_scaffold_46174                   24845 38 +     28053 TT-AGATATGACACCATTTCC-AG--------------T----CA---T-----------------------AAGT----TTGGGTGC-----
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 13
s Onychomys_torridus.OnyTor_scaffold_2986                    79840 37 +    102263 TT-AAAGATGACACCATCATC-AG--------------C----CA---T-----------------------AAGC----CT-GGTGC-----
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 13
s Orycteropus_afer.OryAfe_flattened_line_144387               9425 38 -     18566 TT-AGCTATGACTTCATAATC-AA--------------C----CT---T-----------------------GAGA----CCAGGTGC-----
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 I 7
s Oryctolagus_cuniculus.CM000791.1                        67146979 38 + 174332312 TT-GTATATGACATCATAATT-AG--------------C----CA---T-----------------------GACC----TTTAATGT-----
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 7
s Otocyon_megalotis.JAEUCK010005147.1                       461932 38 -    559221 TT-AAATATGACTTCATAATT-AA--------------C----CA---T-----------------------GAGA----CCAGATGC-----
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 7
s Otolemur_crassicaudatus.k141_222918                         3892 25 +      8798 TT-AGTTATGAAATCATAATT-GC--------------T----CA------------------------------------------------
i Otolemur_crassicaudatus.k141_222918                    C 0 I 9
s Otolemur_garnettii.GL873799.1                             696058 25 -   1103335 TT-AGTTATGAAATCATAATT-GC--------------T----CA------------------------------------------------
i Otolemur_garnettii.GL873799.1                          C 0 I 6
s Pan_paniscus.KQ411613.1                                    43689 43 +     80009 TC-AGATATGACATAATAATC-AA--------------C----TAT--------------------------GAAC----CTTGGTGTGTGGG
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189142597 43 + 189151597 TC-AGATATGACATAATAATC-AA--------------C----TAT--------------------------GAAC----CTTGGTGTGTGGG
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  150767 38 +    230217 TT-AGATATGACTTTACAATC-AA--------------C----CA---T-----------------------GAGA----CCAGATGC-----
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 7
s Panthera_pardus.KV860321.1                                263973 38 +  18783137 tt-agatATGACTTTACAATC-AA--------------C----CA---T-----------------------GAGA----CCAGATGC-----
i Panthera_pardus.KV860321.1                             C 0 I 7
s Panthera_tigris.KE722367.1                               4720611 38 -   8748460 tt-agatATGACTTTACAATC-AA--------------C----CA---T-----------------------GAGA----CCAGATGC-----
i Panthera_tigris.KE722367.1                             C 0 I 7
s Papio_anubis.CM001495.2                                183442788 43 + 183742232 TT-AGAGACGACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             6486 43 +     20448 TT-AGAGACGACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563294 43 +  20919399 TT-AGAGACGACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   5230 43 +     41871 TT-AGAGACGACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     8515 43 +     27711 TT-AGAGACGACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  8596 43 +      9205 TT-AGAGACGACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12240 38 -     78924 TT-AGATATGACTTTATAATC-AA--------------C----CA---T-----------------------GAGA----CCAGGTGC-----
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 7
s Perodicticus_ibeanus.k141_855320                            9861 25 +     13100 TT-AGATATGAAATCATAATT-GT--------------C----CA------------------------------------------------
i Perodicticus_ibeanus.k141_855320                       C 0 I 9
s Perodicticus_potto.k141_1092580                             8267 25 +     25941 TT-AGATATGAAATCATAATT-GT--------------C----CA------------------------------------------------
i Perodicticus_potto.k141_1092580                        C 0 I 9
s Peromyscus_maniculatus.KI615324.1                       18194463 38 -  18517816 TT-AAAGATGACACCATCATC-AG--------------C----CA---T-----------------------AAGC----CTTGGTGC-----
i Peromyscus_maniculatus.KI615324.1                      C 0 I 13
s Piliocolobus_badius.k141_1234363                           43249 43 +     62158 TT-AGAGATGACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        37980 43 +     89929 TT-AGAGATGACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            39396 43 +     51399 TT-AGAGATGACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14295634 43 -  14605196 TT-AGAGATGACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1416 38 +     22620 TT-AGATCTGACTTCATCACC-AA--------------C----TA---T-----------------------GAGA----TTAGGTGC-----
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 7
s Pongo_abelii.CM009266.2                                189130731 43 + 189387572 TC-AGATATGACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGGTGTGTGGG
i Pongo_abelii.CM009266.2                                T 24608 C 0
s Pongo_pygmaeus.ctg66                                     9570339 43 +   9816681 TC-AGATATGACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGGTGTGTGGG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               72918 43 -     81375 TT-AGAGACGACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              4738 43 +     19060 TT-AGAGACGACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 12930 41 -     22811 TG-AGCCAGGGCTTCAGAACC-CA--------------C----CT---T-----------------------GA-ATCAGCCAGGTGC-----
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 I 7
s Prolemur_simus.MPIZ01000396.1                            2596450 22 -   4620579 TT-AGCTATGACGTCATAGTC-GA---------------------------------------------------------------------
i Prolemur_simus.MPIZ01000396.1                          C 0 I 9
s Propithecus_coquerelli.NW_012148875.1                     990434 19 +   2598838 TT-AAAT---ACATCATAATC-GA---------------------------------------------------------------------
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 9
s Propithecus_coronatus.k141_347390                          28743 22 +     38485 TT-AAATACGACATCATAATC-GA---------------------------------------------------------------------
i Propithecus_coronatus.k141_347390                      C 0 I 9
s Propithecus_diadema.k141_58108                               786 22 -     13098 TT-AAATACGACATCATAATC-GA---------------------------------------------------------------------
i Propithecus_diadema.k141_58108                         C 0 I 9
s Propithecus_edwardsi.k141_1176054                          26264 22 +     35766 TT-AAATACGACATCATAATC-GA---------------------------------------------------------------------
i Propithecus_edwardsi.k141_1176054                      C 0 I 9
s Propithecus_perrieri.k141_1200571                           4451 22 -     24134 TT-AAATACGACATCATAATC-GA---------------------------------------------------------------------
i Propithecus_perrieri.k141_1200571                      C 0 I 9
s Propithecus_tattersalli.k141_790011                        28276 22 -     67325 TT-AAATACGACATCATAATC-GA---------------------------------------------------------------------
i Propithecus_tattersalli.k141_790011                    C 0 I 9
s Propithecus_verreauxi.k141_956661                           4499 22 -      6182 TT-AAATACGACATCATAATC-GA---------------------------------------------------------------------
i Propithecus_verreauxi.k141_956661                      C 0 I 9
s Psammomys_obesus.NESX01036370.1                            10077 38 -     21651 TT-GGATATGACACCATAAAC-AG--------------C----CA--------------C------------AGGC----ATTGGTGC-----
i Psammomys_obesus.NESX01036370.1                        C 0 I 13
s Pteronotus_parnellii.KE909381.1                            14266 38 -     21811 AT-AGACACAACTTCATAATC-AA--------------C----Tg--------------------------tgaga----ccaggtgc-----
i Pteronotus_parnellii.KE909381.1                        C 0 I 10
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39817 38 +     42204 TT-AGATATGACTCCATAATC-AA--------------C----CA---T-----------------------GAGA----CCAGATGC-----
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 7
s Pteropus_alecto.KB030862.1                              22976368 38 +  28871421 TT-ATATGTGACTTCATAATC-AA--------------C----TA---T-----------------------GAGA----TGAGGTAC-----
i Pteropus_alecto.KB030862.1                             C 0 I 7
s Pteropus_vampyrus.KN525825.1                             1359454 38 +   4952924 TT-ATATGTGACTTCATAATC-AA--------------C----TA---T-----------------------GAGA----TGAGGTAC-----
i Pteropus_vampyrus.KN525825.1                           C 0 I 7
s Puma_concolor.QAVW01001104.1                            20273921 38 -  38429054 tt-agatATGACTTTACAATC-AA--------------C----CA---T-----------------------GAGA----CCAGATGC-----
i Puma_concolor.QAVW01001104.1                           C 0 I 7
s Pygathrix_cinerea.k141_1153803                             14747 43 -     91421 TT-AGAGACGACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7608867 43 +   7812017 TT-AGAGACGACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             14719 43 -     72585 TT-AGAGACGACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53570318 38 +  90668790 TT-AGATATGACACCATTAAC-AA--------------C----CA---T-----------------------AAGT----GTTGGTGC-----
i Rattus_norvegicus.chr16                                C 0 I 13
s Rhinopithecus_bieti.k119_217274                             6434 43 -     11128 TT-AGAGACGACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGACGTGTGGG
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91235789 43 - 195417433 TT-AGAGACGACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGACGTGTGGG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7671439 43 +   7961872 TT-AGAGACGACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGACGTGTGGG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87389 38 -     96226 TT-ATATATGACTTCATAATC-AA--------------C----TA---T-----------------------GAGA----TGAGGTAC-----
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 7
s Saguinus_bicolor.k141_2619299                               7789 38 -      8359 TT-AGATATGAACTAACAGTC-AA--------------C----CAT--------------------------GAGC----GTTGGCGT-----
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_imperator.k141_2524406                             1748 38 +      2197 TT-AGATATGAACTAACAGTC-AA--------------C----CAT--------------------------GAGC----CTTGGCGT-----
i Saguinus_imperator.k141_2524406                        C 0 C 0
s Saguinus_inustus.k141_699149                               13167 38 +     13640 TT-AGATATGAACTAACAGTC-AA--------------C----CAT--------------------------GAGC----CTTGGCGT-----
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               8036 38 +      8564 TT-AGATATGAACTAACAGTC-AA--------------C----CAT--------------------------GAGC----CTTGGCGT-----
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209468885 38 + 209938924 TT-AGATATGAACTAACAGTC-AA--------------C----CAT--------------------------GAGC----GTTGGCGT-----
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 7594 38 -      9399 TT-AGATATGAACTAACAGTC-AA--------------C----CAT--------------------------GAGC----CTTGGCGT-----
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119950505 38 - 121099817 TT-AGATATGAAGTAATAATC-AG--------------C----CAT--------------------------GAGC----CTTGGCAT-----
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       22961 38 +     46362 TT-AGATATGAAGTAATAATC-AG--------------C----CAT--------------------------GAGC----CTTGGCAT-----
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               23056 38 +     45824 TT-AGATATGAAGTAATAATC-AG--------------C----CAT--------------------------GAGC----CTTGGCAT-----
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             39684 38 -     64574 TT-AGATACGAAGTAATAATC-AG--------------C----CAT--------------------------GAGC----CTTGGCAT-----
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               2690 38 -     23631 TT-AGATATGAAGTAATAATC-AG--------------C----CAT--------------------------GAGC----CTTGGCAT-----
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 22952 38 -     61129 TT-AGATATGAAGTAATAATC-AG--------------C----CAT--------------------------GCGC----CTTGGCAT-----
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420275 37 -   5703754 TT-AGATATGAAATAA-AATC-AG--------------C----CAG--------------------------GAGC----CTTGGCAT-----
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          55316 37 -     80660 TT-AGATATGAAATAA-AATC-AG--------------C----CAG--------------------------GAGC----CTTGGCAT-----
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    152757 38 -    313613 TT-ATATATGACTCCCTAAT-CAA--------------C----TA---T-----------------------GGGA----TGAGGTGC-----
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 7
s Semnopithecus_entellus.k141_11662                          19258 43 -     19888 TT-AGAGATGACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26461 43 +     39453 TT-AGAGATGACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            6980 43 +     27826 TT-AGAGATGACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             6501 43 -     19483 TT-AGAGATGACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      6569 43 +      7198 TT-AGAGATGACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         14827 43 +     15514 TT-AGAGATGACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11576 37 -     12148 -T-AAATATGACACCATAGTT-AA--------------T----CA---T-----------------------AAGC----CTTGGTAC-----
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 I 13
s Solenodon_paradoxus.SolPar_flattened_line_126               3381 38 +   1910179 TA-AGATGCGACTTCAGAATC-AA--------------C----TA---T-----------------------GAGA----CCAGGTGT-----
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 7
s Sorex_araneus.JH798187.1                                13650628 38 -  18376816 TT-AGACATGACTTCTTAATA-AA--------------C----AA-G-------------------------GAGA----TGAAGTAC-----
i Sorex_araneus.JH798187.1                               C 0 I 7
s Spermophilus_dauricus.KZ294078.1                         1953611 42 -   3870691 TA-ACATGTAACACCATAATT-AA--------------CACCATA---T-----------------------GAGC----TTTGGTGC-----
i Spermophilus_dauricus.KZ294078.1                       C 0 I 7
s Spilogale_gracilis.SpiGra_flattened_line_13525             30317 38 +     97271 TT-AGATATGACTCCATAATC-AA--------------C----CA---T-----------------------GTGA----CTAAAGGC-----
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 7
s Suricata_suricatta.SurSur_flattened_line_6629              17907 38 -    196729 TT-AGATATGACTTTATAGTC-AA--------------C----CA-G-------------------------GAGA----CTGGCTGC-----
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 7
s Sus_scrofa.CM000828.4                                    6810081 38 +  69701581 TT-ATATATGACTTCATAATC-AA--------------C----TA---T-----------------------GAGA----CCAGGTGT-----
i Sus_scrofa.CM000828.4                                  C 0 I 7
s Symphalangus_syndactylus.tarseq_199                      1093046 26 -   1523678 TC-AGATATGACATAATAATA-TC--------------A----TAT-----------------------------------------------
i Symphalangus_syndactylus.tarseq_199                    C 0 I 14
s Tadarida_brasiliensis.TadBra_scaffold_25820                10078 38 +     41958 TT-AGCTACAACTTCATAATC-AA--------------C----TA---T-----------------------GAGA----CTAGGAGC-----
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 7
s Tamandua_tetradactyla.TamTet_scaffold_1782                 71710 36 +    116680 TT-GCATATGACTTCATAATC-AA--------------C----CT--------------C------------G--A----TTAGATGC-----
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 I 495
s Tapirus_indicus.TapInd_scaffold_9301                      118336 38 -    156842 TT-AGATATAACTTCACAAAC-AA--------------C----TA---T-----------------------GAGA----CCAGGTGC-----
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 7
s Tapirus_terrestris.TapTer_scaffold_755                    386793 38 +    539355 TT-AGATATAATCTCACAAAC-AA--------------C----TA---T-----------------------GAGA----CCAGGTGC-----
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 7
s Tarsius_lariang.k141_2201908                               26028 37 +     70052 TT-AGATGTGCCATCACAATC-AA--------------C----CA---------------------------GAGC----CTCAGTGC-----
i Tarsius_lariang.k141_2201908                           I 9 I 10
s Tarsius_wallacei.k141_254427                                 861 37 -     16117 TT-AGATGTGCCATCACAATC-AA--------------C----CA---------------------------GAGC----CTCAGTGC-----
i Tarsius_wallacei.k141_254427                           I 9 I 10
s Theropithecus_gelada.CM009954.1                        186428158 43 + 186847797 TT-AGAGACGACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   5567 35 +      8208 TT-AGCTGTGAC-TCATAACC-AA--------------C----CT---T-----------------------G--A----TTAGGGGC-----
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 I 464
s Tonatia_saurophila.TonSau_scaffold_294                     80510 38 +    610378 TT-AGACACGACTTCATAATC-AA--------------C----TA---T-----------------------GAGA----CCAGGTTC-----
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 7
s Trachypithecus_auratus.k141_722599                         10552 43 -     20410 TT-AGAGATGACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    14746 43 +     15221 TT-AGAGATGACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                       10653 43 +     19930 TT-AGAGATGACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       7080 43 -     19997 TT-AGAGATGACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            47204 43 -     60166 TT-AGAGATGACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        14675 43 -     27529 TT-AGAGATGACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     14619 43 -     18194 TT-AGAGATGACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           8347 43 -     21137 TT-AGAGATGACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    7050 43 -     10723 TT-AGAGATGACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         6206 43 +      9834 TT-AGAGATGACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        24519 43 +     32220 TT-AGAGATGACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5938621 43 +   6242583 TT-AGAGATGACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        7873 43 +     20839 TT-AGAGATGACATAATAATC-AA--------------C----CAT--------------------------GAGC----CTTGATGTGTGGG
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4292844 42 +  10818551 TT-AGCTACGGCGTCATAATC-AA--------------A----CT---T-----------------------GAGATCAGCCAGGTGC-----
i Trichechus_manatus.JH594705.1                          C 0 I 7
s Tupaia_chinensis.KB320699.1                              2155281 38 +   4065304 TT-AGTTATGACATCATGGCC-CA--------------C----CA---T-----------------------GAGC----CTTGGTGC-----
i Tupaia_chinensis.KB320699.1                            C 0 I 7
s Tupaia_tana.TupTan_flattened_line_97126                     8932 38 -     10553 TT-AGTTATGACATCATTGTC-CA--------------C----CA---T-----------------------GAGC----CTTGGTGC-----
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 7
s Uropsilus_gracilis.UroGra_scaffold_12083                   52915 37 -     77625 TT-ATATATGATTTCATATT--AA--------------C----TA---T-----------------------GAGA----CAAGGTGT-----
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 7
s Ursus_maritimus.KK499267.1                               4850022 38 -   5085361 TT-AGATATGACTCCATTATC-AA--------------C----CA---T-----------------------GAGA----CCAGATGC-----
i Ursus_maritimus.KK499267.1                             C 0 I 7
s Varecia_rubra.k141_590885                                  11110 22 +     50397 TT-AGCTATGACATCATAATC-AA---------------------------------------------------------------------
i Varecia_rubra.k141_590885                              C 0 I 9
s Varecia_variegata.k141_1128296                             11169 22 +     24756 TT-AGCTATGACATCATAATC-AA---------------------------------------------------------------------
i Varecia_variegata.k141_1128296                         C 0 I 9
s Vicugna_pacos.KN270157.1                                 5371453 38 -   5488506 TT-AGATGTGACTTCAGAATC-AA--------------C----CA--------------C------------GAGA----TCAGGTGT-----
i Vicugna_pacos.KN270157.1                               C 0 I 7
s Vulpes_lagopus.VulLag_flattened_line_30954                 10377 38 -     43706 TT-AAATATGACTTAATAATT-AA--------------C----CA---T-----------------------GAGA----CCAGATGC-----
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 7
s Xerus_inauris.XerIna_scaffold_2302                           741 38 +    224448 TT-ACATATAACACTGTAATC-AA--------------T----CA---T-----------------------AAGC----TTTGGTGC-----
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 7
s Zalophus_californianus.ZalCal_flattened_line_17732          4948 38 +     86975 TT-AGATATGATTCCATAATC-AA--------------C----AA---T-----------------------GAGA----CCAGATGC-----
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 7
s Zapus_hudsonius.ZapHud_scaffold_11398                      14605 38 +     63895 TG-AGAGATGACATTATAAGT-AG--------------C----CA---T-----------------------GAGC----CCCAGTCA-----
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 7
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50341  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352  0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Colobus_guereza.LG01                                   199948958  0 + 200372422 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6384 1 +     62944 T
s Acinonyx_jubatus.LLWD01001279.1                           826959 1 -   1699592 T
i Acinonyx_jubatus.LLWD01001279.1                        I 7 I 3
s Acomys_cahirinus.AcoCah_scaffold_12655                     70552 1 +     87051 T
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 13 I 3
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510206 1 -  29979442 T
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 7 I 3
s Ailurus_fulgens.LNAC01001112.1                             78976 1 -    347723 T
i Ailurus_fulgens.LNAC01001112.1                         I 7 I 3
s Allactaga_bullata.AllBul_scaffold_9566                     74288 1 -     89534 T
i Allactaga_bullata.AllBul_scaffold_9566                 I 7 I 3
s Allenopithecus_nigroviridis.k141_3361533                   14316 1 -     52922 T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         14252 1 -     28001 T
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          4748 1 -     18505 T
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           5601 1 -     12518 T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184700 1 +    412891 C
i Anoura_caudifer.AnoCau_scaffold_1412                   I 7 I 3
s Aplodontia_rufa.AprRuf_scaffold_68852                      12303 1 +     20879 T
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 7 I 3
s Arctocebus_calabarensis.k141_2318572                       11260 1 +     14667 G
i Arctocebus_calabarensis.k141_2318572                   I 9 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4107 1 +     43469 T
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 7 I 3
s Avahi_laniger.k141_765380                                  53418 1 -     92717 C
i Avahi_laniger.k141_765380                              I 9 C 0
s Avahi_peyrierasi.k141_1424874                              54045 1 +     85213 C
i Avahi_peyrierasi.k141_1424874                          I 9 C 0
s Camelus_bactrianus.KN276810.1                           10001995 1 -  17673402 t
i Camelus_bactrianus.KN276810.1                          I 7 I 3
s Camelus_dromedarius.KN272107.1                           2334453 1 -   7040546 t
i Camelus_dromedarius.KN272107.1                         I 7 I 3
s Camelus_ferus.KB017975.1                                  402736 1 -   1652518 t
i Camelus_ferus.KB017975.1                               I 7 I 3
s CanFam4.chr16                                           17798807 1 -  60362399 T
i CanFam4.chr16                                          I 7 I 3
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184864 1 -    185531 T
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 7 I 3
s Canis_lupus_dingo.QKWQ01000480.1                         9034250 1 -   9314153 T
i Canis_lupus_dingo.QKWQ01000480.1                       I 7 I 3
s Canis_lupus_familiaris.chr16                            17958515 1 -  59632846 T
i Canis_lupus_familiaris.chr16                           I 7 I 3
s Canis_lupus_orion.HG994398.1                            18500027 1 +  63665305 T
i Canis_lupus_orion.HG994398.1                           I 7 I 3
s Carlito_syrichta.NW_007247396.1                           201072 1 +    308752 T
i Carlito_syrichta.NW_007247396.1                        I 10 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                4470 1 -     11696 T
i Carollia_perspicillata.CarPer_scaffold_92756           I 7 I 3
s Castor_canadensis.CasCan_scaffold_2074                    136800 1 +    179628 T
i Castor_canadensis.CasCan_scaffold_2074                 I 7 I 3
s Catagonus_wagneri.CatWag_scaffold_2839                     92631 1 +    217609 T
i Catagonus_wagneri.CatWag_scaffold_2839                 I 7 I 3
s Cephalopachus_bancanus.k141_1423433                         5078 1 +     31688 T
i Cephalopachus_bancanus.k141_1423433                    I 10 C 0
s Ceratotherium_simum.JH767749.1                          12231058 1 +  27778364 T
i Ceratotherium_simum.JH767749.1                         I 7 I 3
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2085 1 -     25243 T
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 7 I 3
s Cercocebus_atys.KQ010504.1                               4475261 1 +   4669795 T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        13806 1 -     19203 T
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3342297                            422 1 -     14043 T
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           8458 1 +     27781 T
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         8623 1 -     20310 T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          11602 1 +     29689 T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            6356 1 -     20078 T
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          14281 1 -     27936 T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            3146 1 -     17152 T
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38816682 1 +  39242232 T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222376 1 -  21565898 T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       39494 1 -     53127 T
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        6761 1 +      7159 T
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14293 1 -     27947 T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         14270 1 +     17596 T
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                           315 1 +     14005 T
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             178 1 -      8501 T
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       N 0 I 3
s Cheirogaleus_major.k141_333249                             20797 1 -     52598 C
i Cheirogaleus_major.k141_333249                         I 9 C 0
s Cheirogaleus_medius.k141_1055463                           16162 1 +     57038 C
i Cheirogaleus_medius.k141_1055463                       I 9 C 0
s Chlorocebus_aethiops.ctg25                              18428252 1 -  18827391 T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       14689 1 -     50209 T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135421689 1 + 135778131 T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1910194 1 +   2368649 T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_polykomos.k141_906115                              36732 1 +     84244 T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17547729 1 -  53390261 T
i Condylura_cristata.JH655891.1                          I 7 I 3
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14046 1 -     20389 T
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 7 I 4
s Cricetomys_gambianus.CriGam_scaffold_18520                 49814 1 +     63868 C
i Cricetomys_gambianus.CriGam_scaffold_18520             I 13 I 3
s Cricetulus_griseus.LT883664.1                           11667308 1 + 224834208 T
i Cricetulus_griseus.LT883664.1                          I 13 I 3
s Crocidura_indochinensis.CroInd_scaffold_37019               2624 1 -     19598 T
i Crocidura_indochinensis.CroInd_scaffold_37019          I 4 I 3
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28118 1 -     87169 T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 7 I 3
s Ctenodactylus_gundi.CteGun_scaffold_65                    836810 1 +   1526836 T
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 7 I 3
s Dasypus_novemcinctus.JH564415.1                            63177 1 +   2246927 C
i Dasypus_novemcinctus.JH564415.1                        I 437 I 3
s Daubentonia_madagascariensis.ctg71                      12537026 1 -  12879189 C
i Daubentonia_madagascariensis.ctg71                     I 9 C 0
s Desmodus_rotundus.KZ672289.1                             8629484 1 +  20541912 T
i Desmodus_rotundus.KZ672289.1                           I 7 I 3
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672909 1 +   1390856 T
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 7 I 3
s Diceros_bicornis.DicBicMic_scaffold_5955                    5661 1 +    198055 T
i Diceros_bicornis.DicBicMic_scaffold_5955               I 7 I 3
s Echinops_telfairi.JH980293.1                            48780048 1 + 111700974 T
i Echinops_telfairi.JH980293.1                           I 7 I 3
s Eidolon_helvum.KE759718.1                                  10156 1 +     11740 T
i Eidolon_helvum.KE759718.1                              I 7 I 3
s Elephantulus_edwardii.JH947257.1                         1097349 1 +  10337057 T
i Elephantulus_edwardii.JH947257.1                       I 7 I 3
s Ellobius_lutescens.LOEQ01008920.1                          20049 1 -    110024 T
i Ellobius_lutescens.LOEQ01008920.1                      I 13 I 2
s Ellobius_talpinus.LOJH01081419.1                             180 1 +      8657 T
i Ellobius_talpinus.LOJH01081419.1                       N 0 I 2
s Enhydra_lutris.KZ291758.1                               16328945 1 -  41312741 T
i Enhydra_lutris.KZ291758.1                              I 7 I 3
s Eptesicus_fuscus.JH977646.1                              2145068 1 -  14770903 T
i Eptesicus_fuscus.JH977646.1                            I 7 I 3
s Equus_asinus.JREZ01000139.1                              1283179 1 +   4378816 T
i Equus_asinus.JREZ01000139.1                            I 7 I 3
s Equus_caballus.CM000403.2                               18530999 1 -  39960074 T
i Equus_caballus.CM000403.2                              I 7 I 3
s Equus_przewalskii.KK951119.1                               33028 1 +    498745 T
i Equus_przewalskii.KK951119.1                           I 7 I 3
s Erinaceus_europaeus.JH835339.1                           3327433 1 -   7059049 T
i Erinaceus_europaeus.JH835339.1                         I 7 I 3
s Erythrocebus_patas.Contig38                             21204859 1 -  21539334 T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13522 1 -     14127 C
i Eulemur_albifrons.k141_342033                          I 9 C 0
s Eulemur_collaris.k141_377015                                6223 1 -     16928 C
i Eulemur_collaris.k141_377015                           I 9 C 0
s Eulemur_coronatus.k141_885031                              15249 1 -     25546 C
i Eulemur_coronatus.k141_885031                          I 9 C 0
s Eulemur_flavifrons.k141_1184614                            12453 1 +     26330 C
i Eulemur_flavifrons.k141_1184614                        I 9 C 0
s Eulemur_fulvus.k141_544389                                 13686 1 +     23973 C
i Eulemur_fulvus.k141_544389                             I 9 C 0
s Eulemur_macaco.k141_1562045                                12450 1 +     75513 C
i Eulemur_macaco.k141_1562045                            I 9 C 0
s Eulemur_mongoz.k141_232305                                 10381 1 +     97555 C
i Eulemur_mongoz.k141_232305                             I 9 C 0
s Eulemur_rubriventer.k141_571033                            13312 1 +     26496 C
i Eulemur_rubriventer.k141_571033                        I 9 C 0
s Eulemur_rufus.k141_1476633                                  3922 1 -     17153 C
i Eulemur_rufus.k141_1476633                             I 9 C 0
s Eulemur_sanfordi.k141_1122526                              13497 1 +    111500 C
i Eulemur_sanfordi.k141_1122526                          I 9 C 0
s Felis_catus.CM001381.2                                  20236610 1 + 206538554 T
i Felis_catus.CM001381.2                                 I 7 I 3
s Felis_catus_fca126.CM031415.1                           20195453 1 + 205367284 T
i Felis_catus_fca126.CM031415.1                          I 7 I 3
s Felis_nigripes.FelNig_flattened_line_20823                  8967 1 -     36744 T
i Felis_nigripes.FelNig_flattened_line_20823             I 7 I 3
s Galago_moholi.ctg2040                                     426394 1 -    453645 C
i Galago_moholi.ctg2040                                  I 9 C 0
s Galago_senegalensis.k141_631886                             4085 1 +     11339 C
i Galago_senegalensis.k141_631886                        I 9 C 0
s Galagoides_demidoff.k141_1711393                            1399 1 +     41679 C
i Galagoides_demidoff.k141_1711393                       I 9 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840                858 1 -      9135 T
i Galeopterus_variegatus.GalVar_scaffold_108840          I 22 C 0
s Gorilla_beringei.k141_3596273                              15639 1 -     32273 T
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186337785 1 + 186649187 T
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6568 1 -     19426 C
i Hapalemur_alaotrensis.k141_170648                      I 9 C 0
s Hapalemur_gilberti.k141_488810                             11717 1 -     15286 C
i Hapalemur_gilberti.k141_488810                         I 9 C 0
s Hapalemur_griseus.k141_1511508                             13356 1 +     18253 C
i Hapalemur_griseus.k141_1511508                         I 9 C 0
s Hapalemur_meridionalis.k141_248335                         13457 1 -     41752 C
i Hapalemur_meridionalis.k141_248335                     I 9 C 0
s Hapalemur_occidentalis.k141_907772                         13294 1 -     16460 C
i Hapalemur_occidentalis.k141_907772                     I 9 C 0
s Helogale_parvula.HelPar_flattened_line_2585               241953 1 +    327341 T
i Helogale_parvula.HelPar_flattened_line_2585            I 7 I 3
s Heterohyrax_brucei.HetBruBak_scaffold_122365                 523 1 +      7595 T
i Heterohyrax_brucei.HetBruBak_scaffold_122365           I 7 I 3
s Hoolock_leuconedys.ctg274                                    434451 1 +    630532 T
i Hoolock_leuconedys.ctg274                                 I 14 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  44390 1 +     55795 T
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 7 I 3
s Hylobates_agilis.k141_232023                                2217 1 -     12752 T
i Hylobates_agilis.k141_232023                           I 14 C 0
s Hylobates_klossii.k141_240831                               2261 1 +     14092 T
i Hylobates_klossii.k141_240831                          I 14 C 0
s Hylobates_pileatus_b.LG02                                     189543044 1 - 191637585 T
i Hylobates_pileatus_b.LG02                                     I 14 C 0
s Hylobates_pileatus_a.tarseq_633                            3335939 1 -  11177569 T
i Hylobates_pileatus_a.tarseq_633                          I 14 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7520606 1 -   7955117 T
i Ictidomys_tridecemlineatus.JH393364.1                  I 7 I 3
s Indri_indri.k141_3655594                                   22239 1 +     31101 C
i Indri_indri.k141_3655594                               I 9 C 0
s Jaculus_jaculus.JH725527.1                               8276563 1 -   9596543 T
i Jaculus_jaculus.JH725527.1                             I 7 I 3
s Lasiurus_borealis.LasBor_scaffold_32767                    13486 1 -     42476 T
i Lasiurus_borealis.LasBor_scaffold_32767                I 7 I 3
s Lemur_catta.scaffold_24                                 15523801 1 -  30322482 C
i Lemur_catta.scaffold_24                                I 9 C 0
s Lepilemur_ankaranensis.k141_596936                         10699 1 -     23766 C
i Lepilemur_ankaranensis.k141_596936                     I 9 C 0
s Lepilemur_dorsalis.k141_577674                             28760 1 +     45836 C
i Lepilemur_dorsalis.k141_577674                         I 9 C 0
s Lepilemur_ruficaudatus.k141_121139                          1297 1 +     25010 C
i Lepilemur_ruficaudatus.k141_121139                     I 9 C 0
s Lepilemur_septentrionalis.k141_185316                      26696 1 +     54090 C
i Lepilemur_septentrionalis.k141_185316                  I 9 C 0
s Leptonychotes_weddellii.KB714746.1                       3042473 1 +   3914936 T
i Leptonychotes_weddellii.KB714746.1                     I 7 I 3
s Lepus_americanus.LepAme_scaffold_107385                     6142 1 -     14121 C
i Lepus_americanus.LepAme_scaffold_107385                I 7 I 3
s Lophocebus_aterrimus.ctg367                              1436808 1 +   1826925 T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5642 1 +     11245 C
i Loris_lydekkerianus.k141_2539221                       I 9 C 0
s Loris_tardigradus.ctg83                                  1004462 1 +   6120653 C
i Loris_tardigradus.ctg83                                I 9 C 0
s Loxodonta_africana.GL010049.1                            4216963 1 -  43346337 T
i Loxodonta_africana.GL010049.1                          I 7 I 3
s Lycaon_pictus.CM007581.1                                17954755 1 -  59628241 T
i Lycaon_pictus.CM007581.1                               I 7 I 3
s Macaca_arctoides.k141_2326796                               6618 1 +     40492 T
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59675877 1 +  60120075 T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 12390 1 -     26193 T
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            80174 1 -    114318 T
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  5865 1 -     23192 T
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                15334 1 -     29190 T
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  23899 1 +     37952 T
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186838988 1 + 187317192 T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25457551 1 -  25927173 T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  79747 1 +     89720 T
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 6748 1 +     20474 T
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   6548 1 -     14993 T
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  329414 1 -    668171 T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 4864 1 -     24072 T
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               25486 1 -     45290 T
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90253 1 +     94391 T
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 7 I 3
s Mandrillus_leucophaeus.scaffold280                      23937081 1 -  24302211 T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               351209 1 +    752769 T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33102790 1 -  40650429 T
i Marmota_marmota.CZRN01000018.1                         I 7 I 3
s Megaderma_lyra.MegLyr_scaffold_4542                         9961 1 -    207569 T
i Megaderma_lyra.MegLyr_scaffold_4542                    I 7 I 4
s Mellivora_capensis.MelCap_flattened_line_69365              9662 1 +     13704 T
i Mellivora_capensis.MelCap_flattened_line_69365         I 7 I 3
s Meriones_unguiculatus.MerUng_scaffold_7390                 32489 1 +    140813 G
i Meriones_unguiculatus.MerUng_scaffold_7390             I 13 I 3
s Mesocricetus_auratus.KB708134.1                         12181986 1 -  29670104 T
i Mesocricetus_auratus.KB708134.1                        I 13 I 3
s Microcebus_murinus.CM007674.1                           18291221 1 -  93316391 C
i Microcebus_murinus.CM007674.1                          I 9 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    21785 1 -    145209 T
i Microgale_talazaci.MicTal_scaffold_6613                I 7 I 3
s Micronycteris_hirsuta.MicHir_scaffold_52381                15025 1 -     19307 G
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 7 I 3
s Miniopterus_natalensis.LDJU01000034.1                    1850261 1 +   8254450 T
i Miniopterus_natalensis.LDJU01000034.1                  I 7 I 3
s Miniopterus_schreibersii.MinSch_scaffold_18080             33938 1 +     64694 T
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 7 I 3
s Miopithecus_ogouensis.k141_534055                           8807 1 -     28506 T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         5341 1 -      8324 T
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 7 I 3
s Mirza_zaza.k141_952172                                      8766 1 -     37649 C
i Mirza_zaza.k141_952172                                 I 9 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140968 1 -    366855 T
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 7 I 3
s Mungos_mungo.MunMun_flattened_line_23663                   35052 1 +     37127 T
i Mungos_mungo.MunMun_flattened_line_23663               I 7 I 3
s Mus_caroli.LT608237.1                                   84361106 1 - 120012414 C
i Mus_caroli.LT608237.1                                  I 13 I 3
s Mus_musculus.chr8                                       87650104 1 - 129401213 C
i Mus_musculus.chr8                                      I 13 I 3
s Mus_pahari.LT608297.1                                   31354760 1 -  89631738 C
i Mus_pahari.LT608297.1                                  I 13 I 3
s Mus_spretus.CM004101.1                                  90752165 1 - 130317789 C
i Mus_spretus.CM004101.1                                 I 13 I 3
s Mustela_putorius.JH418006.1                               300846 1 -  14710649 T
i Mustela_putorius.JH418006.1                            I 7 I 3
s Myotis_brandtii.KE162005.1                                279304 1 -  10118263 T
i Myotis_brandtii.KE162005.1                             I 7 I 3
s Myotis_davidii.KB100139.1                                1586997 1 -   6019432 T
i Myotis_davidii.KB100139.1                              I 7 I 3
s Myotis_lucifugus.GL429869.1                              3903069 1 -   4330536 T
i Myotis_lucifugus.GL429869.1                            I 7 I 3
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              188886 1 +    196477 T
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 499 I 3
s Nannospalax_galili.KL204047.1                            2033807 1 -   3037898 T
i Nannospalax_galili.KL204047.1                          I 4 I 3
s Nasalis_larvatus.k141_413338                               14781 1 +     21681 T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306595 1 +  31847680 T
i Neomonachus_schauinslandi.NINY01007730.1               I 7 I 3
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149009 1 -   9404916 T
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 7 I 3
s Nycticebus_bengalensis.LG01                            102579434 1 - 196305487 C
i Nycticebus_bengalensis.LG01                            I 9 C 0
s Nycticebus_coucang.k141_771082                              1279 1 -      2667 C
i Nycticebus_coucang.k141_771082                         I 9 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749862 1 + 199412804 C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 9 C 0
s Ochotona_princeps.JH802162.1                             1363370 1 +   3988456 C
i Ochotona_princeps.JH802162.1                           I 7 I 3
s Odobenus_rosmarus.KB229312.1                              506280 1 -   2017862 T
i Odobenus_rosmarus.KB229312.1                           I 7 I 3
s Ondatra_zibethicus.OndZib_scaffold_46174                   24896 1 +     28053 T
i Ondatra_zibethicus.OndZib_scaffold_46174               I 13 I 2
s Onychomys_torridus.OnyTor_scaffold_2986                    79890 1 +    102263 T
i Onychomys_torridus.OnyTor_scaffold_2986                I 13 I 3
s Orycteropus_afer.OryAfe_flattened_line_144387               9470 1 -     18566 T
i Orycteropus_afer.OryAfe_flattened_line_144387          I 7 I 3
s Oryctolagus_cuniculus.CM000791.1                        67147024 1 + 174332312 T
i Oryctolagus_cuniculus.CM000791.1                       I 7 I 3
s Otocyon_megalotis.JAEUCK010005147.1                       461977 1 -    559221 T
i Otocyon_megalotis.JAEUCK010005147.1                    I 7 I 3
s Otolemur_crassicaudatus.k141_222918                         3926 1 +      8798 C
i Otolemur_crassicaudatus.k141_222918                    I 9 C 0
s Otolemur_garnettii.GL873799.1                             696089 1 -   1103335 C
i Otolemur_garnettii.GL873799.1                          I 6 C 0
s Pan_paniscus.KQ411613.1                                    43732 1 +     80009 T
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189142640 1 + 189151597 T
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  150812 1 +    230217 T
i Panthera_onca.PanOnc_flattened_line_3271               I 7 I 3
s Panthera_pardus.KV860321.1                                264018 1 +  18783137 G
i Panthera_pardus.KV860321.1                             I 7 I 3
s Panthera_tigris.KE722367.1                               4720656 1 -   8748460 t
i Panthera_tigris.KE722367.1                             I 7 I 244
s Papio_anubis.CM001495.2                                183442831 1 + 183742232 T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             6529 1 +     20448 T
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563337 1 +  20919399 T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   5273 1 +     41871 T
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     8558 1 +     27711 T
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  8639 1 +      9205 T
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12285 1 -     78924 T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 7 I 3
s Perodicticus_ibeanus.k141_855320                            9895 1 +     13100 G
i Perodicticus_ibeanus.k141_855320                       I 9 C 0
s Perodicticus_potto.k141_1092580                             8301 1 +     25941 G
i Perodicticus_potto.k141_1092580                        I 9 C 0
s Peromyscus_maniculatus.KI615324.1                       18194514 1 -  18517816 T
i Peromyscus_maniculatus.KI615324.1                      I 13 I 3
s Piliocolobus_badius.k141_1234363                           43292 1 +     62158 T
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        38023 1 +     89929 T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            39439 1 +     51399 T
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14295677 1 -  14605196 T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1461 1 +     22620 T
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 7 I 3
s Pongo_abelii.CM009266.2                                189130774 1 + 189387572 T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570382 1 +   9816681 T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               72961 1 -     81375 T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              4781 1 +     19060 T
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 12978 1 -     22811 T
i Procavia_capensis.ProCapCap_scaffold_85530             I 7 I 3
s Prolemur_simus.MPIZ01000396.1                            2596481 1 -   4620579 C
i Prolemur_simus.MPIZ01000396.1                          I 9 C 0
s Propithecus_coquerelli.NW_012148875.1                     990462 1 +   2598838 C
i Propithecus_coquerelli.NW_012148875.1                  I 9 C 0
s Propithecus_coronatus.k141_347390                          28774 1 +     38485 C
i Propithecus_coronatus.k141_347390                      I 9 C 0
s Propithecus_diadema.k141_58108                               817 1 -     13098 C
i Propithecus_diadema.k141_58108                         I 9 C 0
s Propithecus_edwardsi.k141_1176054                          26295 1 +     35766 C
i Propithecus_edwardsi.k141_1176054                      I 9 C 0
s Propithecus_perrieri.k141_1200571                           4482 1 -     24134 C
i Propithecus_perrieri.k141_1200571                      I 9 C 0
s Propithecus_tattersalli.k141_790011                        28307 1 -     67325 C
i Propithecus_tattersalli.k141_790011                    I 9 C 0
s Propithecus_verreauxi.k141_956661                           4530 1 -      6182 C
i Propithecus_verreauxi.k141_956661                      I 9 C 0
s Psammomys_obesus.NESX01036370.1                            10128 1 -     21651 G
i Psammomys_obesus.NESX01036370.1                        I 13 I 3
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39862 1 +     42204 T
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 7 I 3
s Pteropus_alecto.KB030862.1                              22976413 1 +  28871421 T
i Pteropus_alecto.KB030862.1                             I 7 I 3
s Pteropus_vampyrus.KN525825.1                             1359499 1 +   4952924 T
i Pteropus_vampyrus.KN525825.1                           I 7 I 3
s Puma_concolor.QAVW01001104.1                            20273966 1 -  38429054 T
i Puma_concolor.QAVW01001104.1                           I 7 I 3
s Pygathrix_cinerea.k141_1153803                             14790 1 -     91421 T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7608910 1 +   7812017 T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             14762 1 -     72585 T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53570369 1 +  90668790 C
i Rattus_norvegicus.chr16                                I 13 I 3
s Rhinopithecus_bieti.k119_217274                             6477 1 -     11128 T
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91235832 1 - 195417433 T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7671482 1 +   7961872 T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87434 1 -     96226 T
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 7 I 3
s Scalopus_aquaticus.ScaAqu_scaffold_662                    152802 1 -    313613 C
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 7 I 3
s Semnopithecus_entellus.k141_11662                          19301 1 -     19888 T
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26504 1 +     39453 T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            7023 1 +     27826 T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             6544 1 -     19483 T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      6612 1 +      7198 T
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         14870 1 +     15514 T
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11626 1 -     12148 T
i Sigmodon_hispidus.SigHis_scaffold_60841                I 13 I 3
s Solenodon_paradoxus.SolPar_flattened_line_126               3426 1 +   1910179 T
i Solenodon_paradoxus.SolPar_flattened_line_126          I 7 I 3
s Sorex_araneus.JH798187.1                                13650673 1 -  18376816 T
i Sorex_araneus.JH798187.1                               I 7 I 3
s Spermophilus_dauricus.KZ294078.1                         1953660 1 -   3870691 T
i Spermophilus_dauricus.KZ294078.1                       I 7 I 3
s Spilogale_gracilis.SpiGra_flattened_line_13525             30362 1 +     97271 T
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 7 I 3
s Suricata_suricatta.SurSur_flattened_line_6629              17952 1 -    196729 T
i Suricata_suricatta.SurSur_flattened_line_6629          I 7 I 3
s Sus_scrofa.CM000828.4                                    6810126 1 +  69701581 T
i Sus_scrofa.CM000828.4                                  I 7 I 3
s Symphalangus_syndactylus.tarseq_199                      1093086 1 -   1523678 T
i Symphalangus_syndactylus.tarseq_199                    I 14 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                10123 1 +     41958 T
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 7 I 3
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72241 1 +    116680 T
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 495 I 3
s Tapirus_indicus.TapInd_scaffold_9301                      118381 1 -    156842 T
i Tapirus_indicus.TapInd_scaffold_9301                   I 7 I 3
s Tapirus_terrestris.TapTer_scaffold_755                    386838 1 +    539355 T
i Tapirus_terrestris.TapTer_scaffold_755                 I 7 I 3
s Tarsius_lariang.k141_2201908                               26075 1 +     70052 T
i Tarsius_lariang.k141_2201908                           I 10 C 0
s Tarsius_wallacei.k141_254427                                 908 1 -     16117 T
i Tarsius_wallacei.k141_254427                           I 10 C 0
s Theropithecus_gelada.CM009954.1                        186428201 1 + 186847797 T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   6066 1 +      8208 T
i Tolypeutes_matacus.TolMat_scaffold_228639              I 464 I 3
s Tonatia_saurophila.TonSau_scaffold_294                     80555 1 +    610378 T
i Tonatia_saurophila.TonSau_scaffold_294                 I 7 I 3
s Trachypithecus_auratus.k141_722599                         10595 1 -     20410 T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    14789 1 +     15221 T
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                       10696 1 +     19930 T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       7123 1 -     19997 T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            47247 1 -     60166 T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        14718 1 -     27529 T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     14662 1 -     18194 T
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           8390 1 -     21137 T
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    7093 1 -     10723 T
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         6249 1 +      9834 T
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        24562 1 +     32220 T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5938664 1 +   6242583 T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        7916 1 +     20839 T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4292893 1 +  10818551 T
i Trichechus_manatus.JH594705.1                          I 7 I 3
s Tupaia_chinensis.KB320699.1                              2155326 1 +   4065304 T
i Tupaia_chinensis.KB320699.1                            I 7 I 3
s Tupaia_tana.TupTan_flattened_line_97126                     8977 1 -     10553 T
i Tupaia_tana.TupTan_flattened_line_97126                I 7 I 3
s Uropsilus_gracilis.UroGra_scaffold_12083                   52959 1 -     77625 T
i Uropsilus_gracilis.UroGra_scaffold_12083               I 7 I 3
s Ursus_maritimus.KK499267.1                               4850067 1 -   5085361 T
i Ursus_maritimus.KK499267.1                             I 7 I 3
s Varecia_rubra.k141_590885                                  11141 1 +     50397 C
i Varecia_rubra.k141_590885                              I 9 C 0
s Varecia_variegata.k141_1128296                             11200 1 +     24756 C
i Varecia_variegata.k141_1128296                         I 9 C 0
s Vicugna_pacos.KN270157.1                                 5371498 1 -   5488506 T
i Vicugna_pacos.KN270157.1                               I 7 I 3
s Vulpes_lagopus.VulLag_flattened_line_30954                 10422 1 -     43706 T
i Vulpes_lagopus.VulLag_flattened_line_30954             I 7 I 3
s Xerus_inauris.XerIna_scaffold_2302                           786 1 +    224448 T
i Xerus_inauris.XerIna_scaffold_2302                     I 7 I 3
s Zalophus_californianus.ZalCal_flattened_line_17732          4993 1 +     86975 T
i Zalophus_californianus.ZalCal_flattened_line_17732     I 7 I 3
s Zapus_hudsonius.ZapHud_scaffold_11398                      14650 1 +     63895 T
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 7 I 3
e Sapajus_macrocephalus.k141_351809                          55353 0 -     80660 C
e Sapajus_apella.ctg103                                    5420312 0 -   5703754 C
e Saimiri_ustus.k141_1484609                                 22990 0 -     61129 C
e Saimiri_sciureus.k141_2278166                               2728 0 -     23631 C
e Saimiri_oerstedii.k141_1487881                             39722 0 -     64574 C
e Saimiri_macrodon.k141_716185                               23094 0 +     45824 C
e Saimiri_cassiquiarensis.k141_2188234                       22999 0 +     46362 C
e Saimiri_boliviensis.NW_024100920.1                     119950543 0 - 121099817 C
e Saguinus_mystax.k141_374627                                 7632 0 -      9399 C
e Saguinus_midas.LG03                                    209468923 0 + 209938924 C
e Saguinus_labiatus.k141_285685                               8074 0 +      8564 C
e Saguinus_inustus.k141_699149                               13205 0 +     13640 C
e Saguinus_imperator.k141_2524406                             1786 0 +      2197 C
e Saguinus_bicolor.k141_2619299                               7827 0 -      8359 C
e Mico_schneideri.k141_1950671                                      5440 0 -      7356 C
e Mico_humeralifer.k141_1976199                               4501 0 +     18990 C
e Mico_argentatus.k141_1239457                                5428 0 -      7380 C
e Leontopithecus_rosalia.k141_464620                         25360 0 +     66356 C
e Leontopithecus_chrysomelas.k141_1519602                    28663 0 +     38576 C
e Leontocebus_nigricollis.k141_4610752                        7191 0 +     35603 C
e Leontocebus_illigeri.k141_3350179                           4473 0 +      4941 C
e Leontocebus_fuscicollis.k141_1820339                        7150 0 +     64341 C
e Chiropotes_albinasus.k141_2813271                          10765 0 +     11226 C
e Cebus_unicolor.k141_544048                                 49554 0 -     74725 C
e Cebus_olivaceus.k141_398305                                 1217 0 +      1777 C
e Cebus_albifrons.Contig27                                25651641 0 +  26074798 C
e Cebuella_pygmaea.k141_1309012                               5611 0 -      7577 C
e Cebuella_niveiventris.k141_1251222                          9513 0 -     11392 C
e Callithrix_kuhlii.k119_1164682                             11599 0 -     12001 C
e Callithrix_jacchus.pat_scaffold_3                       23590068 0 - 189096842 C
e Callithrix_geoffroyi.k119_512088                            4854 0 +      5267 C
e Callimico_goeldii.k141_1091182                             24360 0 +     31915 C
e Callibella_humilis.k141_1278103                             4888 0 -     10423 C
e Aotus_vociferans.k141_344750                               28279 0 -     47192 C
e Aotus_trivirgatus.k141_2152450                             15155 0 -     34685 C
e Aotus_nancymaae.KZ198451.1                               4297550 0 -   5030052 C
e Aotus_griseimembra.k141_2240599                            15153 0 -     34016 C
e Aotus_azarae.k141_3104676                                  15133 0 -     33861 C
e Alouatta_seniculus.k141_117119                             14513 0 +     50774 C
e Alouatta_puruensis.k141_1253230                             3289 0 -      3544 C
e Alouatta_palliata.k141_2135620                              3189 0 +     47717 C
e Alouatta_nigerrima.k141_3472759                            17790 0 -     18578 C
e Alouatta_macconnelli.k141_918386                             219 0 -      9457 C
e Alouatta_juara.k141_1509701                                24494 0 +     25266 C
e Alouatta_discolor.k141_743489                               3284 0 -     45847 C
e Alouatta_caraya.k141_1701091                                 218 0 -     36483 C
e Alouatta_belzebul.k141_3560514                              7096 0 +     51355 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937 0 +    114563 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Pteronotus_parnellii.KE909381.1                            14304 10 -     21811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813 0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           6125 7 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50341 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352 0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547 0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084 0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Colobus_guereza.LG01                                   199948958 0 + 200372422 C
e Choloepus_hoffmanni.KN194906.1                            172586 455 +    839153 I
e Choloepus_didactylus.ChoDid_scaffold_45914                 17489 477 +     19366 I
e Chinchilla_lanigera.JH722012.1                           1251498 0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157 0 -  23392119 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6385 4 +     62944 TATT
s Acinonyx_jubatus.LLWD01001279.1                           826963 4 -   1699592 TATT
i Acinonyx_jubatus.LLWD01001279.1                        I 3 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     70556 4 +     87051 TATT
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 3 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510210 4 -  29979442 TATT
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 3 C 0
s Ailurus_fulgens.LNAC01001112.1                             78980 4 -    347723 TATT
i Ailurus_fulgens.LNAC01001112.1                         I 3 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     74292 1 -     89534 ---T
i Allactaga_bullata.AllBul_scaffold_9566                 I 3 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14317 4 -     52922 TATT
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         14253 4 -     28001 TATT
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          4749 4 -     18505 TATT
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           5602 4 -     12518 TATT
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184704 4 +    412891 TATT
i Anoura_caudifer.AnoCau_scaffold_1412                   I 3 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      12307 4 +     20879 TATC
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 3 C 0
s Arctocebus_calabarensis.k141_2318572                       11261 4 +     14667 TACT
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4111 4 +     43469 TATT
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 3 C 0
s Avahi_laniger.k141_765380                                  53419 4 -     92717 TACT
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54046 4 +     85213 TACT
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Camelus_bactrianus.KN276810.1                           10001999 4 -  17673402 tatt
i Camelus_bactrianus.KN276810.1                          I 3 C 0
s Camelus_dromedarius.KN272107.1                           2334457 4 -   7040546 tatt
i Camelus_dromedarius.KN272107.1                         I 3 C 0
s Camelus_ferus.KB017975.1                                  402740 4 -   1652518 tatt
i Camelus_ferus.KB017975.1                               I 3 C 0
s CanFam4.chr16                                           17798811 4 -  60362399 TATT
i CanFam4.chr16                                          I 3 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184868 4 -    185531 TATT
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 3 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034254 4 -   9314153 TATT
i Canis_lupus_dingo.QKWQ01000480.1                       I 3 C 0
s Canis_lupus_familiaris.chr16                            17958519 4 -  59632846 TATT
i Canis_lupus_familiaris.chr16                           I 3 C 0
s Canis_lupus_orion.HG994398.1                            18500031 4 +  63665305 TATT
i Canis_lupus_orion.HG994398.1                           I 3 C 0
s Carlito_syrichta.NW_007247396.1                           201073 4 +    308752 TATG
i Carlito_syrichta.NW_007247396.1                        C 0 I 2
s Carollia_perspicillata.CarPer_scaffold_92756                4474 4 -     11696 CATT
i Carollia_perspicillata.CarPer_scaffold_92756           I 3 C 0
s Castor_canadensis.CasCan_scaffold_2074                    136804 4 +    179628 TGAT
i Castor_canadensis.CasCan_scaffold_2074                 I 3 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     92635 4 +    217609 TCTT
i Catagonus_wagneri.CatWag_scaffold_2839                 I 3 C 0
s Cephalopachus_bancanus.k141_1423433                         5079 4 +     31688 TATG
i Cephalopachus_bancanus.k141_1423433                    C 0 I 2
s Ceratotherium_simum.JH767749.1                          12231062 4 +  27778364 TATT
i Ceratotherium_simum.JH767749.1                         I 3 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2089 4 -     25243 TATT
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 3 C 0
s Cercocebus_atys.KQ010504.1                               4475262 4 +   4669795 TATT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        13807 4 -     19203 TATT
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3342297                            423 4 -     14043 TATT
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           8459 4 +     27781 TATT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         8624 4 -     20310 TATT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          11603 4 +     29689 TATT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            6357 4 -     20078 TATT
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          14282 4 -     27936 TATT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            3147 4 -     17152 TCTT
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38816683 4 +  39242232 TATT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222377 4 -  21565898 TATT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       39495 4 -     53127 TATT
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        6762 4 +      7159 TATT
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14294 4 -     27947 TATT
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         14271 4 +     17596 TATT
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                           316 4 +     14005 TATT
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             182 4 -      8501 TATT
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       I 3 C 0
s Cheirogaleus_major.k141_333249                             20798 4 -     52598 TGCT
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16163 4 +     57038 TGCT
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chlorocebus_aethiops.ctg25                              18428253 4 -  18827391 TATT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       14690 4 -     50209 TATT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135421690 4 + 135778131 TATT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1910195 4 +   2368649 TATT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_polykomos.k141_906115                              36733 4 +     84244 TATT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17547733 4 -  53390261 TATT
i Condylura_cristata.JH655891.1                          I 3 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14051 3 -     20389 -ATT
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 4 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 49818 4 +     63868 TATT
i Cricetomys_gambianus.CriGam_scaffold_18520             I 3 C 0
s Cricetulus_griseus.LT883664.1                           11667312 4 + 224834208 TATT
i Cricetulus_griseus.LT883664.1                          I 3 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               2628 1 -     19598 ---T
i Crocidura_indochinensis.CroInd_scaffold_37019          I 3 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28122 4 -     87169 TATT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 3 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    836814 4 +   1526836 TGTT
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 3 C 0
s Dasypus_novemcinctus.JH564415.1                            63181 4 +   2246927 TATT
i Dasypus_novemcinctus.JH564415.1                        I 3 C 0
s Daubentonia_madagascariensis.ctg71                      12537027 4 -  12879189 TATT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8629488 4 +  20541912 TATT
i Desmodus_rotundus.KZ672289.1                           I 3 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672913 4 +   1390856 TATT
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 3 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    5665 4 +    198055 TATT
i Diceros_bicornis.DicBicMic_scaffold_5955               I 3 C 0
s Echinops_telfairi.JH980293.1                            48780052 4 + 111700974 CATT
i Echinops_telfairi.JH980293.1                           I 3 C 0
s Eidolon_helvum.KE759718.1                                  10160 3 +     11740 -ATT
i Eidolon_helvum.KE759718.1                              I 3 C 0
s Elephantulus_edwardii.JH947257.1                         1097353 4 +  10337057 TATT
i Elephantulus_edwardii.JH947257.1                       I 3 C 0
s Ellobius_lutescens.LOEQ01008920.1                          20052 4 -    110024 TACT
i Ellobius_lutescens.LOEQ01008920.1                      I 2 C 0
s Ellobius_talpinus.LOJH01081419.1                             183 4 +      8657 TACT
i Ellobius_talpinus.LOJH01081419.1                       I 2 C 0
s Enhydra_lutris.KZ291758.1                               16328949 4 -  41312741 TATT
i Enhydra_lutris.KZ291758.1                              I 3 C 0
s Eptesicus_fuscus.JH977646.1                              2145072 4 -  14770903 TATT
i Eptesicus_fuscus.JH977646.1                            I 3 C 0
s Equus_asinus.JREZ01000139.1                              1283183 4 +   4378816 TATT
i Equus_asinus.JREZ01000139.1                            I 3 C 0
s Equus_caballus.CM000403.2                               18531003 4 -  39960074 TATT
i Equus_caballus.CM000403.2                              I 3 C 0
s Equus_przewalskii.KK951119.1                               33032 4 +    498745 TATT
i Equus_przewalskii.KK951119.1                           I 3 C 0
s Erinaceus_europaeus.JH835339.1                           3327437 4 -   7059049 AAAT
i Erinaceus_europaeus.JH835339.1                         I 3 C 0
s Erythrocebus_patas.Contig38                             21204860 4 -  21539334 TATT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13523 4 -     14127 TACT
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6224 4 -     16928 TACT
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15250 4 -     25546 TACT
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12454 4 +     26330 CACT
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 13687 4 +     23973 TACT
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12451 4 +     75513 CACT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10382 4 +     97555 TACT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            13313 4 +     26496 TACT
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  3923 4 -     17153 TACT
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13498 4 +    111500 TACT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20236614 4 + 206538554 TATT
i Felis_catus.CM001381.2                                 I 3 C 0
s Felis_catus_fca126.CM031415.1                           20195457 4 + 205367284 TATT
i Felis_catus_fca126.CM031415.1                          I 3 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  8971 4 -     36744 TATT
i Felis_nigripes.FelNig_flattened_line_20823             I 3 C 0
s Galago_moholi.ctg2040                                     426395 4 -    453645 TACT
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4086 4 +     11339 TACT
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            1400 4 +     41679 TACT
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840                859 4 -      9135 TATT
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              15640 4 -     32273 TATT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186337786 4 + 186649187 TATT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6569 4 -     19426 TACT
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             11718 4 -     15286 TACT
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13357 4 +     18253 TACT
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13458 4 -     41752 TACT
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13295 4 -     16460 TACT
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               241957 4 +    327341 TATT
i Helogale_parvula.HelPar_flattened_line_2585            I 3 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                 527 4 +      7595 TATT
i Heterohyrax_brucei.HetBruBak_scaffold_122365           I 3 C 0
s Hoolock_leuconedys.ctg274                                    434452 4 +    630532 TATT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  44394 4 +     55795 TATT
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 3 I 256
s Hylobates_agilis.k141_232023                                2218 4 -     12752 TATT
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                               2262 4 +     14092 TATT
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189543045 4 - 191637585 TATT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3335940 4 -  11177569 TATT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7520610 4 -   7955117 TATT
i Ictidomys_tridecemlineatus.JH393364.1                  I 3 C 0
s Indri_indri.k141_3655594                                   22240 4 +     31101 TACT
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8276567 1 -   9596543 ---T
i Jaculus_jaculus.JH725527.1                             I 3 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    13490 4 -     42476 TATT
i Lasiurus_borealis.LasBor_scaffold_32767                I 3 C 0
s Lemur_catta.scaffold_24                                 15523802 4 -  30322482 TACT
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         10700 4 -     23766 TGCT
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             28761 4 +     45836 TGCT
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1298 4 +     25010 TGCT
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      26697 4 +     54090 TGCT
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3042477 2 +   3914936 T--T
i Leptonychotes_weddellii.KB714746.1                     I 3 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6146 4 -     14121 TATT
i Lepus_americanus.LepAme_scaffold_107385                I 3 C 0
s Lophocebus_aterrimus.ctg367                              1436809 4 +   1826925 TATT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5643 4 +     11245 TACT
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004463 4 +   6120653 TACT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4216967 4 -  43346337 TATT
i Loxodonta_africana.GL010049.1                          I 3 C 0
s Lycaon_pictus.CM007581.1                                17954759 4 -  59628241 TATT
i Lycaon_pictus.CM007581.1                               I 3 C 0
s Macaca_arctoides.k141_2326796                               6619 4 +     40492 TATT
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59675878 4 +  60120075 TATT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 12391 4 -     26193 TATT
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            80175 4 -    114318 TATT
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  5866 4 -     23192 TATT
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                15335 4 -     29190 TATT
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  23900 4 +     37952 TATT
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186838989 4 + 187317192 TATT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25457552 4 -  25927173 TATT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  79748 4 +     89720 TATT
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 6749 4 +     20474 TATT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   6549 4 -     14993 TATT
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  329415 4 -    668171 TATT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 4865 4 -     24072 TATT
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               25487 4 -     45290 TATT
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90257 3 +     94391 -ATT
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 3 C 0
s Mandrillus_leucophaeus.scaffold280                      23937082 4 -  24302211 TATT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               351210 4 +    752769 TATT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33102794 4 -  40650429 TATT
i Marmota_marmota.CZRN01000018.1                         I 3 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         9966 3 -    207569 -ATT
i Megaderma_lyra.MegLyr_scaffold_4542                    I 4 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              9666 4 +     13704 TATT
i Mellivora_capensis.MelCap_flattened_line_69365         I 3 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 32493 4 +    140813 TATT
i Meriones_unguiculatus.MerUng_scaffold_7390             I 3 C 0
s Mesocricetus_auratus.KB708134.1                         12181990 4 -  29670104 TACT
i Mesocricetus_auratus.KB708134.1                        I 3 C 0
s Microcebus_murinus.CM007674.1                           18291222 4 -  93316391 TGCT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    21789 4 -    145209 TATT
i Microgale_talazaci.MicTal_scaffold_6613                I 3 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                15029 4 -     19307 TATT
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 3 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850265 4 +   8254450 TATT
i Miniopterus_natalensis.LDJU01000034.1                  I 3 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             33942 4 +     64694 CATT
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 3 C 0
s Miopithecus_ogouensis.k141_534055                           8808 4 -     28506 TATT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         5345 2 -      8324 T--T
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 3 C 0
s Mirza_zaza.k141_952172                                      8767 4 -     37649 TGCT
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140972 4 -    366855 TATG
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 3 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35056 4 +     37127 TATT
i Mungos_mungo.MunMun_flattened_line_23663               I 3 C 0
s Mus_caroli.LT608237.1                                   84361110 4 - 120012414 TATT
i Mus_caroli.LT608237.1                                  I 3 C 0
s Mus_musculus.chr8                                       87650108 4 - 129401213 TATT
i Mus_musculus.chr8                                      I 3 C 0
s Mus_pahari.LT608297.1                                   31354764 4 -  89631738 TATT
i Mus_pahari.LT608297.1                                  I 3 C 0
s Mus_spretus.CM004101.1                                  90752169 4 - 130317789 TATT
i Mus_spretus.CM004101.1                                 I 3 C 0
s Mustela_putorius.JH418006.1                               300850 4 -  14710649 TATT
i Mustela_putorius.JH418006.1                            I 3 C 0
s Myotis_brandtii.KE162005.1                                279308 4 -  10118263 TATT
i Myotis_brandtii.KE162005.1                             I 3 C 0
s Myotis_davidii.KB100139.1                                1587001 4 -   6019432 TATT
i Myotis_davidii.KB100139.1                              I 3 C 0
s Myotis_lucifugus.GL429869.1                              3903073 4 -   4330536 TATT
i Myotis_lucifugus.GL429869.1                            I 3 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              188890 4 +    196477 TACC
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 3 C 0
s Nannospalax_galili.KL204047.1                            2033811 4 -   3037898 TATC
i Nannospalax_galili.KL204047.1                          I 3 C 0
s Nasalis_larvatus.k141_413338                               14782 4 +     21681 TATT
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306599 2 +  31847680 T--T
i Neomonachus_schauinslandi.NINY01007730.1               I 3 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149013 4 -   9404916 TATT
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 3 C 0
s Nycticebus_bengalensis.LG01                            102579435 4 - 196305487 TACT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_771082                              1280 4 -      2667 TACT
i Nycticebus_coucang.k141_771082                         C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749863 4 + 199412804 TACT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1363374 4 +   3988456 TAAT
i Ochotona_princeps.JH802162.1                           I 3 C 0
s Odobenus_rosmarus.KB229312.1                              506284 2 -   2017862 T--T
i Odobenus_rosmarus.KB229312.1                           I 3 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   24899 4 +     28053 TACT
i Ondatra_zibethicus.OndZib_scaffold_46174               I 2 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    79894 4 +    102263 TATT
i Onychomys_torridus.OnyTor_scaffold_2986                I 3 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9474 4 -     18566 TATT
i Orycteropus_afer.OryAfe_flattened_line_144387          I 3 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147028 4 + 174332312 TGTT
i Oryctolagus_cuniculus.CM000791.1                       I 3 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       461981 4 -    559221 TATT
i Otocyon_megalotis.JAEUCK010005147.1                    I 3 C 0
s Otolemur_crassicaudatus.k141_222918                         3927 4 +      8798 TACT
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696090 4 -   1103335 TACT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    43733 4 +     80009 TATT
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189142641 4 + 189151597 TATT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  150816 4 +    230217 TATT
i Panthera_onca.PanOnc_flattened_line_3271               I 3 C 0
s Panthera_pardus.KV860321.1                                264022 4 +  18783137 TATT
i Panthera_pardus.KV860321.1                             I 3 C 0
s Panthera_tigris.KE722367.1                               4720901 4 -   8748460 TATT
i Panthera_tigris.KE722367.1                             I 244 C 0
s Papio_anubis.CM001495.2                                183442832 4 + 183742232 TATT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             6530 4 +     20448 TATT
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563338 4 +  20919399 TATT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   5274 4 +     41871 TATT
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     8559 4 +     27711 TATT
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  8640 4 +      9205 TATT
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12289 4 -     78924 TATT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 3 C 0
s Perodicticus_ibeanus.k141_855320                            9896 4 +     13100 TACT
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8302 4 +     25941 TACT
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18194518 4 -  18517816 TATT
i Peromyscus_maniculatus.KI615324.1                      I 3 C 0
s Piliocolobus_badius.k141_1234363                           43293 4 +     62158 TATT
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        38024 4 +     89929 TATT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            39440 4 +     51399 TATT
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14295678 4 -  14605196 TATT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1465 4 +     22620 TATT
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 3 C 0
s Pongo_abelii.CM009266.2                                189130775 4 + 189387572 TATT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570383 4 +   9816681 TATT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               72962 4 -     81375 TATT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              4782 4 +     19060 TATT
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 12982 4 -     22811 TATT
i Procavia_capensis.ProCapCap_scaffold_85530             I 3 C 0
s Prolemur_simus.MPIZ01000396.1                            2596482 4 -   4620579 TACT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990463 4 +   2598838 TACT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          28775 4 +     38485 TACT
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                               818 4 -     13098 TACT
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26296 4 +     35766 TACT
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4483 4 -     24134 TACT
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28308 4 -     67325 TACT
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4531 4 -      6182 TACT
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            10132 4 -     21651 TATT
i Psammomys_obesus.NESX01036370.1                        I 3 C 0
s Pteronotus_parnellii.KE909381.1                            14314 4 -     21811 tatt
i Pteronotus_parnellii.KE909381.1                        I 10 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39866 4 +     42204 TATT
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 3 C 0
s Pteropus_alecto.KB030862.1                              22976417 3 +  28871421 -ATT
i Pteropus_alecto.KB030862.1                             I 3 C 0
s Pteropus_vampyrus.KN525825.1                             1359503 3 +   4952924 -ATT
i Pteropus_vampyrus.KN525825.1                           I 3 C 0
s Puma_concolor.QAVW01001104.1                            20273970 4 -  38429054 TATT
i Puma_concolor.QAVW01001104.1                           I 3 C 0
s Pygathrix_cinerea.k141_1153803                             14791 4 -     91421 TATT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7608911 4 +   7812017 TATT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             14763 4 -     72585 TATT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53570373 4 +  90668790 CATT
i Rattus_norvegicus.chr16                                I 3 C 0
s Rhinopithecus_bieti.k119_217274                             6478 4 -     11128 TATT
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91235833 4 - 195417433 TATT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7671483 4 +   7961872 TATT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87438 3 -     96226 -ATT
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 3 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    152806 4 -    313613 TATT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 3 C 0
s Semnopithecus_entellus.k141_11662                          19302 4 -     19888 TATT
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26505 4 +     39453 TATT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            7024 4 +     27826 TATT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             6545 4 -     19483 TATT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      6613 4 +      7198 TATT
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         14871 4 +     15514 TATT
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11630 4 -     12148 TATT
i Sigmodon_hispidus.SigHis_scaffold_60841                I 3 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               3430 4 +   1910179 GACT
i Solenodon_paradoxus.SolPar_flattened_line_126          I 3 C 0
s Sorex_araneus.JH798187.1                                13650677 1 -  18376816 ---T
i Sorex_araneus.JH798187.1                               I 3 C 0
s Spermophilus_dauricus.KZ294078.1                         1953664 4 -   3870691 TATT
i Spermophilus_dauricus.KZ294078.1                       I 3 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30366 4 +     97271 TATT
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 3 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              17956 4 -    196729 TATT
i Suricata_suricatta.SurSur_flattened_line_6629          I 3 C 0
s Sus_scrofa.CM000828.4                                    6810130 4 +  69701581 TCTT
i Sus_scrofa.CM000828.4                                  I 3 C 0
s Symphalangus_syndactylus.tarseq_199                      1093087 4 -   1523678 TATT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                10127 4 +     41958 TATT
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 3 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72245 4 +    116680 TATT
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 3 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118385 4 -    156842 TATT
i Tapirus_indicus.TapInd_scaffold_9301                   I 3 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    386842 4 +    539355 TATT
i Tapirus_terrestris.TapTer_scaffold_755                 I 3 C 0
s Tarsius_lariang.k141_2201908                               26076 4 +     70052 TATG
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                 909 4 -     16117 TATG
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428202 4 + 186847797 TATT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   6070 4 +      8208 TGTT
i Tolypeutes_matacus.TolMat_scaffold_228639              I 3 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     80559 4 +    610378 TATT
i Tonatia_saurophila.TonSau_scaffold_294                 I 3 C 0
s Trachypithecus_auratus.k141_722599                         10596 4 -     20410 TATT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    14790 4 +     15221 TATT
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                       10697 4 +     19930 TATT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       7124 4 -     19997 TATT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            47248 4 -     60166 TATT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        14719 4 -     27529 TATT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     14663 4 -     18194 TATT
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           8391 4 -     21137 TATT
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    7094 4 -     10723 TATT
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         6250 4 +      9834 TATT
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        24563 4 +     32220 TATT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5938665 4 +   6242583 TATT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        7917 4 +     20839 TATT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4292897 4 +  10818551 TATT
i Trichechus_manatus.JH594705.1                          I 3 C 0
s Tupaia_chinensis.KB320699.1                              2155330 4 +   4065304 TGTT
i Tupaia_chinensis.KB320699.1                            I 3 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     8981 4 -     10553 TGTT
i Tupaia_tana.TupTan_flattened_line_97126                I 3 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   52963 4 -     77625 TATT
i Uropsilus_gracilis.UroGra_scaffold_12083               I 3 C 0
s Ursus_maritimus.KK499267.1                               4850071 4 -   5085361 TATT
i Ursus_maritimus.KK499267.1                             I 3 C 0
s Varecia_rubra.k141_590885                                  11142 4 +     50397 TACT
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11201 4 +     24756 TACT
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371502 4 -   5488506 TATT
i Vicugna_pacos.KN270157.1                               I 3 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10426 4 -     43706 TATT
i Vulpes_lagopus.VulLag_flattened_line_30954             I 3 C 0
s Xerus_inauris.XerIna_scaffold_2302                           790 4 +    224448 TATT
i Xerus_inauris.XerIna_scaffold_2302                     I 3 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          4997 2 +     86975 T--T
i Zalophus_californianus.ZalCal_flattened_line_17732     I 3 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      14654 1 +     63895 ---T
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 3 C 0
e Sapajus_macrocephalus.k141_351809                          55353 0 -     80660 C
e Sapajus_apella.ctg103                                    5420312 0 -   5703754 C
e Saimiri_ustus.k141_1484609                                 22990 0 -     61129 C
e Saimiri_sciureus.k141_2278166                               2728 0 -     23631 C
e Saimiri_oerstedii.k141_1487881                             39722 0 -     64574 C
e Saimiri_macrodon.k141_716185                               23094 0 +     45824 C
e Saimiri_cassiquiarensis.k141_2188234                       22999 0 +     46362 C
e Saimiri_boliviensis.NW_024100920.1                     119950543 0 - 121099817 C
e Saguinus_mystax.k141_374627                                 7632 0 -      9399 C
e Saguinus_midas.LG03                                    209468923 0 + 209938924 C
e Saguinus_labiatus.k141_285685                               8074 0 +      8564 C
e Saguinus_inustus.k141_699149                               13205 0 +     13640 C
e Saguinus_imperator.k141_2524406                             1786 0 +      2197 C
e Saguinus_bicolor.k141_2619299                               7827 0 -      8359 C
e Mico_schneideri.k141_1950671                                      5440 0 -      7356 C
e Mico_humeralifer.k141_1976199                               4501 0 +     18990 C
e Mico_argentatus.k141_1239457                                5428 0 -      7380 C
e Leontopithecus_rosalia.k141_464620                         25360 0 +     66356 C
e Leontopithecus_chrysomelas.k141_1519602                    28663 0 +     38576 C
e Leontocebus_nigricollis.k141_4610752                        7191 0 +     35603 C
e Leontocebus_illigeri.k141_3350179                           4473 0 +      4941 C
e Leontocebus_fuscicollis.k141_1820339                        7150 0 +     64341 C
e Chiropotes_albinasus.k141_2813271                          10765 0 +     11226 C
e Cebus_unicolor.k141_544048                                 49554 0 -     74725 C
e Cebus_olivaceus.k141_398305                                 1217 0 +      1777 C
e Cebus_albifrons.Contig27                                25651641 0 +  26074798 C
e Cebuella_pygmaea.k141_1309012                               5611 0 -      7577 C
e Cebuella_niveiventris.k141_1251222                          9513 0 -     11392 C
e Callithrix_kuhlii.k119_1164682                             11599 0 -     12001 C
e Callithrix_jacchus.pat_scaffold_3                       23590068 0 - 189096842 C
e Callithrix_geoffroyi.k119_512088                            4854 0 +      5267 C
e Callimico_goeldii.k141_1091182                             24360 0 +     31915 C
e Callibella_humilis.k141_1278103                             4888 0 -     10423 C
e Aotus_vociferans.k141_344750                               28279 0 -     47192 C
e Aotus_trivirgatus.k141_2152450                             15155 0 -     34685 C
e Aotus_nancymaae.KZ198451.1                               4297550 0 -   5030052 C
e Aotus_griseimembra.k141_2240599                            15153 0 -     34016 C
e Aotus_azarae.k141_3104676                                  15133 0 -     33861 C
e Alouatta_seniculus.k141_117119                             14513 0 +     50774 C
e Alouatta_puruensis.k141_1253230                             3289 0 -      3544 C
e Alouatta_palliata.k141_2135620                              3189 0 +     47717 C
e Alouatta_nigerrima.k141_3472759                            17790 0 -     18578 C
e Alouatta_macconnelli.k141_918386                             219 0 -      9457 C
e Alouatta_juara.k141_1509701                                24494 0 +     25266 C
e Alouatta_discolor.k141_743489                               3284 0 -     45847 C
e Alouatta_caraya.k141_1701091                                 218 0 -     36483 C
e Alouatta_belzebul.k141_3560514                              7096 0 +     51355 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937 0 +    114563 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813 0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           6125 7 +     14753 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50341 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352 0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626 0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547 0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084 0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923 0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569 0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Colobus_guereza.LG01                                   199948958 0 + 200372422 C
e Choloepus_hoffmanni.KN194906.1                            172586 455 +    839153 I
e Choloepus_didactylus.ChoDid_scaffold_45914                 17489 477 +     19366 I
e Chinchilla_lanigera.JH722012.1                           1251498 0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157 0 -  23392119 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6389 10 +     62944 CAA-G-CCAG-CT
s Acinonyx_jubatus.LLWD01001279.1                           826967 10 -   1699592 TAA-A-CCAC-CT
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 2
s Acomys_cahirinus.AcoCah_scaffold_12655                     70560 10 +     87051 CAA-A-CTAG-CT
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510214 10 -  29979442 TAA-A-CCag-ct
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             78984 10 -    347723 TAA-A-CCag-ct
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     74293 10 -     89534 TGA-A-TCAG-CT
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14321 10 -     52922 CAG-G-CCAG-CT
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         14257 10 -     28001 CAG-G-CCAG-CT
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          4753 10 -     18505 CAG-G-CCAG-CT
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           5606 10 -     12518 CAG-G-CCAG-CT
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184708 10 +    412891 TAA-A-CCAG-CT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      12311 10 +     20879 CAA-A-TCAG-AT
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       11265 11 +     14667 CAATA-GTAT-CT
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4115 10 +     43469 TAA-A-CCAG-CT
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  53423 10 -     92717 CAC-A-CCAG-CT
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54050 10 +     85213 CAC-A-CCAG-CT
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002003 10 -  17673402 taa-a-gcag-CT
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334461 10 -   7040546 taa-a-gcag-CT
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  402744 10 -   1652518 taa-a-gcag-CT
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17798815 10 -  60362399 TAA-A-CCAG-CT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184872 10 -    185531 TAA-A-CCAG-CT
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034258 10 -   9314153 TAA-A-CCag-ct
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17958523 10 -  59632846 TAA-A-CCag-ct
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18500035 10 +  63665305 TAA-A-CCag-ct
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007247396.1                           201079  3 +    308752 ---------G-GT
i Carlito_syrichta.NW_007247396.1                        I 2 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                4478 10 -     11696 TAA-A-CCAG-CT
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    136808 10 +    179628 CAA-A-CAAG-CA
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     92639 10 +    217609 TAA-A-CCAG-CT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         5085  3 +     31688 ---------G-CT
i Cephalopachus_bancanus.k141_1423433                    I 2 C 0
s Ceratotherium_simum.JH767749.1                          12231066 10 +  27778364 TAA-A-CCAG-CT
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2093 10 -     25243 TAA-A-CCAG-CT
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4475266 10 +   4669795 CAG-G-CCAG-CT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        13811 10 -     19203 CAG-G-CCAG-CT
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3342297                            427 10 -     14043 CAG-G-CCAG-CT
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           8463 10 +     27781 CAG-G-CCAG-CT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         8628 10 -     20310 CAG-G-CCAG-CT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          11607 10 +     29689 CAG-G-CCAG-CT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            6361 10 -     20078 CAG-G-CCAG-CT
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          14286 10 -     27936 CAG-G-CCAG-CT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            3151 10 -     17152 CAG-G-CCAG-CT
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38816687 10 +  39242232 CAG-G-CCAG-CT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222381 10 -  21565898 CAG-G-CCAG-CT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       39499 10 -     53127 CAG-G-CCAG-CT
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        6766 10 +      7159 CAG-G-CCAG-CT
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14298 10 -     27947 CAG-G-GCAG-CT
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         14275 10 +     17596 CAG-G-CCAG-CT
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                           320 10 +     14005 CAG-G-CCAG-CT
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             186 10 -      8501 CAA-A-TCAG-CT
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             20802 10 -     52598 CAC-A-CCAG-CT
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16167 10 +     57038 CAC-A-CCAG-CT
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chlorocebus_aethiops.ctg25                              18428257 10 -  18827391 CAG-G-CCAG-CT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       14694 10 -     50209 CAG-G-CCAG-CT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135421694 10 + 135778131 CAG-G-CCAG-CT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 17966  4 +     19366 --------AG-CT
i Choloepus_didactylus.ChoDid_scaffold_45914             I 477 C 0
s Choloepus_hoffmanni.KN194906.1                            173041  4 +    839153 --------AG-CT
i Choloepus_hoffmanni.KN194906.1                         I 455 C 0
s Colobus_angolensis.KN981557.1                            1910199 10 +   2368649 CAG-G-CCAG-CT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_polykomos.k141_906115                              36737 10 +     84244 CAG-G-CCAG-CT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17547737  9 -  53390261 TAA-A-CCAG-C-
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14054 10 -     20389 TAA-A-CTAG-CT
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 49822 10 +     63868 CAA-A-CCAG-CT
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11667316 10 + 224834208 CAT-A-CCAG-CT
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               2629 10 -     19598 TAA-A-CCAA-CT
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28126 10 -     87169 TAA-A-CCAG-CT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    836818 11 +   1526836 TAA-A-CTAACTG
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            63185 10 +   2246927 CAG-A-GCAG-CT
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537031 10 -  12879189 CAC-C-AAAC-CT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8629492 10 +  20541912 TAA-A-CCAG-CT
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672917 10 +   1390856 TAA-A-CCAG-CT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    5669 10 +    198055 TAA-A-CCAG-CT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Echinops_telfairi.JH980293.1                            48780056 10 + 111700974 CAC-A-TAAA-AT
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.KE759718.1                                  10163 10 +     11740 TAA-A-CCAG-CT
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1097357 10 +  10337057 CAA-A-CCAG-AT
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          20056 10 -    110024 CAC-A-TCAG-CC
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                             187 10 +      8657 CAC-A-TCAG-CC
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16328953 10 -  41312741 TAA-G-CCag-ct
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2145076 10 -  14770903 TAA-A-CCCG-CT
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1283187 10 +   4378816 TAA-A-CCAG-CT
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18531007 10 -  39960074 TAA-A-CCAG-CT
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               33036 10 +    498745 TAA-A-CCAG-CT
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3327441  9 -   7059049 ACA-C-TGAG-A-
i Erinaceus_europaeus.JH835339.1                         C 0 I 524
s Erythrocebus_patas.Contig38                             21204864 10 -  21539334 CAG-G-CCAG-CT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13527 10 -     14127 CAC-A-CCAG-CT
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6228 10 -     16928 CAC-A-CCAG-CT
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15254 10 -     25546 CAC-A-CCAG-CT
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12458 10 +     26330 CAC-A-CCAG-CT
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 13691 10 +     23973 CAC-A-CCAG-CT
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12455 10 +     75513 CAC-A-CCAG-CT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10386 10 +     97555 CAC-A-CCAG-CT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            13317 10 +     26496 CAC-A-CCAG-CT
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  3927 10 -     17153 CAC-A-CCAG-CT
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13502 10 +    111500 CAC-A-CCAG-CT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20236618 10 + 206538554 TAA-A-CCAC-CT
i Felis_catus.CM001381.2                                 C 0 I 2
s Felis_catus_fca126.CM031415.1                           20195461 10 + 205367284 TAA-A-CCAC-CT
i Felis_catus_fca126.CM031415.1                          C 0 I 2
s Felis_nigripes.FelNig_flattened_line_20823                  8975 10 -     36744 TAA-A-CCAC-CT
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 2
s Galago_moholi.ctg2040                                     426399 11 -    453645 TAATA-GCAG-GA
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4090 11 +     11339 TAATA-GCAG-GA
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            1404 11 +     41679 TAATA-GCAG-CA
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840                863 10 -      9135 CAA-A-CCAG-CT
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              15644 10 -     32273 CAA-G-CCAG-CT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186337790 10 + 186649187 CAA-G-CCAG-CT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6573 10 -     19426 CAC-A-CCAG-CT
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             11722 10 -     15286 CAC-A-CCAG-CT
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13361 10 +     18253 CAC-A-CCAG-CT
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13462 10 -     41752 CAC-A-CCAG-CT
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13299 10 -     16460 CAC-A-CCAG-CT
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               241961  9 +    327341 TAA-A-C-AG-GT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                 531 10 +      7595 CAA-A-CCAG-AT
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hoolock_leuconedys.ctg274                                    434456 10 +    630532 CAA-G-CCAG-CT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  44654 10 +     55795 TAA-A-CCAA-CT
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 256 C 0
s Hylobates_agilis.k141_232023                                2222 10 -     12752 CAA-G-CCAG-CT
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                               2266 10 +     14092 CAA-G-CCAG-CT
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189543049 10 - 191637585 CAA-G-CCAG-CT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3335944 10 -  11177569 CAA-G-CCAG-CT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7520614 10 -   7955117 CAA-A-TCAG-TT
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   22244 10 +     31101 CAC-A-CCAG-CT
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8276568 10 -   9596543 CAA-A-TCAG-CT
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    13494 10 -     42476 GAA-A-CCTG-CT
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15523806 10 -  30322482 CAC-A-CCAG-CT
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         10704 10 -     23766 CAC-C-CCAG-CT
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             28765 10 +     45836 CAC-C-CCAG-CT
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1302 10 +     25010 CAC-C-CCAG-CT
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      26701 10 +     54090 CAC-C-CCAG-CT
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3042479 10 +   3914936 TAA-A-CCag-ct
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6150 10 -     14121 CAA-G-CCAG-TT
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1436813 10 +   1826925 CAG-G-CCAG-CT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5647 11 +     11245 CAATG-GCAG-CT
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004467 11 +   6120653 CAATG-GCAG-CT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4216971 10 -  43346337 CAA-A-CCAG-AT
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17954763 10 -  59628241 TAA-A-CCag-ct
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               6623 10 +     40492 CAG-G-CCAG-CT
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59675882 10 +  60120075 CAG-G-CCAG-CT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 12395 10 -     26193 CAG-G-CCAG-CT
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            80179 10 -    114318 CAG-G-CCAG-CT
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  5870 10 -     23192 CAG-G-CCAG-CT
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                15339 10 -     29190 CAG-G-CCAG-CT
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  23904 10 +     37952 CAG-G-CCAG-CT
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186838993 10 + 187317192 CAG-G-CCAG-CT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25457556 10 -  25927173 CAG-G-CCAG-CT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  79752 10 +     89720 CAG-G-CCAG-CT
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 6753 10 +     20474 CAG-G-CCAG-CT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   6553 10 -     14993 CAG-G-CCAG-CT
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  329419 10 -    668171 CAG-G-CCAG-CT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 4869 10 -     24072 CAG-G-CCAG-CT
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               25491 10 -     45290 CAG-G-CCAG-CT
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90260 10 +     94391 TAA-A-CCAG-CT
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23937086 10 -  24302211 CAG-G-CCAG-CT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               351214 10 +    752769 CAG-G-CCAG-CT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33102798 10 -  40650429 AAA-A-TCAG-TT
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                         9969 10 -    207569 TAA-A-CCAG-CT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              9670 10 +     13704 TAA-G-CCAG-CT
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 32497 10 +    140813 CAA-A-CTAG-CT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12181994 10 -  29670104 CAC-A-CCCG-CT
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Microcebus_murinus.CM007674.1                           18291226 10 -  93316391 CAC-A-CCAG-CT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    21793 10 -    145209 CAA-A-TAAA-AG
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                15033 10 -     19307 TAA-A-GCAG-CT
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850269 10 +   8254450 TCA-A-CCAG-CT
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             33946 10 +     64694 TCA-A-CCAG-CT
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           8812 10 -     28506 CAG-G-CCAG-CT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         5347 10 -      8324 TAA-A-CCAG-CT
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      8771 10 -     37649 CAC-A-CCAG-CT
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140976 10 -    366855 TAA-A-CCAG-CT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35060  9 +     37127 TAA-A-C-AG-GT
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           6132  7 +     14753 ----A-CCCA-CT
i Murina_feae.MurFea_scaffold_85699                      I 7 C 0
s Mus_caroli.LT608237.1                                   84361114 10 - 120012414 CAA-A-CTAG-CT
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87650112 10 - 129401213 CAA-A-CTAG-CT
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31354768 10 -  89631738 CAA-A-CTAG-CT
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90752173 10 - 130317789 CAA-A-CTAG-CT
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               300854 10 -  14710649 TAA-G-CCAG-CT
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                279312 10 -  10118263 TAA-A-CCCA-CT
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1587005 10 -   6019432 TAA-A-CCCG-CT
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3903077 10 -   4330536 TAA-A-CCTC-CT
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              188894 10 +    196477 GAA-A-TCAG-CT
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2033815 10 -   3037898 TAA-A-CTAG-CT
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               14786 10 +     21681 CAG-G-CCGG-CT
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306601 10 +  31847680 TAA-A-CCAg-ct
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149017 10 -   9404916 TAA-A-TCag-ct
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102579439 11 - 196305487 CAATG-GCAG-CT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_771082                              1284 11 -      2667 CAATG-GCAG-CT
i Nycticebus_coucang.k141_771082                         C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749867 11 + 199412804 CAATG-GCAG-CT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1363378  4 +   3988456 CCA-G--------
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              506286 10 -   2017862 TAA-A-CAag-ct
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   24903 10 +     28053 CAC-A-TCAG-CT
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    79898 10 +    102263 CAC-A-CCAG-CT
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9478 10 -     18566 CAA-A-CCAG-AT
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147032 10 + 174332312 CAA-G-CCAG-TT
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       461985 10 -    559221 TAA-A-CCag-ct
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         3931 11 +      8798 TAATA-GCAG-TG
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696094 11 -   1103335 TAATA-GCAG-TG
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    43737 10 +     80009 CAA-G-CCAG-CT
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189142645 10 + 189151597 CAA-G-CCAG-CT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  150820 10 +    230217 TAA-A-CCAG-CT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 2
s Panthera_pardus.KV860321.1                                264026 10 +  18783137 TAA-A-CCAG-CT
i Panthera_pardus.KV860321.1                             C 0 I 2
s Panthera_tigris.KE722367.1                               4720905 10 -   8748460 TAA-A-CCAG-CT
i Panthera_tigris.KE722367.1                             C 0 I 2
s Papio_anubis.CM001495.2                                183442836 10 + 183742232 CAG-G-CCAG-CT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             6534 10 +     20448 CAG-G-CCAG-CT
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563342 10 +  20919399 CAG-G-CCAG-CT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   5278 10 +     41871 CAG-G-CCAG-CT
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     8563 10 +     27711 CAG-G-CCAG-CT
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  8644 10 +      9205 CAG-G-CCAG-CT
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12293 10 -     78924 TAA-A-CCAG-CT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            9900 11 +     13100 CAATA-GCAT-CT
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8306 11 +     25941 CAATA-GCAG-CT
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18194522 10 -  18517816 CAC-A-CCAG-CT
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Piliocolobus_badius.k141_1234363                           43297 10 +     62158 CAG-G-CCAG-CT
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        38028 10 +     89929 CAG-G-CCAG-CT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            39444 10 +     51399 CAG-G-CCAG-CT
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14295682 10 -  14605196 CAG-G-CCAG-CT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1469 10 +     22620 TAA-A-CCCA-CT
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189130779 10 + 189387572 CAA-G-CCAG-CT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570387 10 +   9816681 CAA-G-CCAG-CT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               72966 10 -     81375 CAG-G-CCGG-CT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              4786 10 +     19060 CAG-G-CCGG-CT
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 12986 10 -     22811 CAA-A-CCAG-AT
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2596486 10 -   4620579 CAC-A-CCAG-CT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990467 10 +   2598838 CAC-A-CCAG-CT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          28779 10 +     38485 CAC-A-CCAG-CT
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                               822 10 -     13098 CAC-A-CCAG-CT
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26300 10 +     35766 CAC-A-CCAG-CT
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4487 10 -     24134 CAC-A-CCAG-CT
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28312 10 -     67325 CAC-A-CCAG-CT
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4535 10 -      6182 CAC-A-CCAG-CT
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            10136 10 -     21651 CAA-A-CTAG-CT
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            14318 10 -     21811 taa-g-ccag-cc
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39870 10 +     42204 TAA-G-CCAG-CT
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22976420 10 +  28871421 TAA-A-CCAG-CT
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1359506 10 +   4952924 TAA-A-CCAG-CT
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20273974 10 -  38429054 TAA-A-CCAC-CT
i Puma_concolor.QAVW01001104.1                           C 0 I 2
s Pygathrix_cinerea.k141_1153803                             14795 10 -     91421 CAG-G-CCGG-CT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7608915 10 +   7812017 CAG-G-CCGG-CT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             14767 10 -     72585 CAG-G-CCGG-CT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53570377 10 +  90668790 CAA-A-CTAG-CT
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             6482 10 -     11128 CAG-G-CCGG-CT
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91235837 10 - 195417433 CAG-G-CCGG-CT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7671487 10 +   7961872 CAG-G-CCGG-CT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87441 10 -     96226 TAC-A-CCAG-CT
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    152810  9 -    313613 TAA-A-CCAG-C-
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          19306 10 -     19888 CAG-G-CCGG-CT
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26509 10 +     39453 CAG-G-CCGG-CT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            7028 10 +     27826 CAG-G-CCGG-CT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             6549 10 -     19483 CAG-G-CCGG-CT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      6617 10 +      7198 CAG-G-CCGG-CT
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         14875 10 +     15514 CAG-G-CCGG-CT
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11634 10 -     12148 CAC-A-GCAG-CT
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               3434 10 +   1910179 TAA-A-CCAG-CG
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13650678 10 -  18376816 GAA-A-CCAG-TT
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1953668 10 -   3870691 CAA-A-TCAG-TT
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30370 10 +     97271 TAA-A-CCAG-CT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              17960 10 -    196729 TAA-ACC-AG-GT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6810134 10 +  69701581 TAA-A-CCAG-CT
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1093091 10 -   1523678 CAA-G-CCAG-CT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                10131 10 +     41958 CAA-A-CCAG-CT
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72249 10 +    116680 GAA-A-CCAG-CT
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118389 10 -    156842 TAA-A-CGAG-CT
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    386846 10 +    539355 TAA-A-CCAG-CT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               26080 10 +     70052 CAG-A-CCAG-CT
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                 913 10 -     16117 CAG-A-CCAC-CT
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428206 10 + 186847797 CAG-G-CCAG-CT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   6074 10 +      8208 CAC-A-TCAG-CT
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     80563 10 +    610378 TAA-A-CCAG-CT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         10600 10 -     20410 CAG-G-CCGG-CT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    14794 10 +     15221 CAG-G-CCGG-CT
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                       10701 10 +     19930 CAG-G-CCGG-CT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       7128 10 -     19997 CAG-G-CCGG-CT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            47252 10 -     60166 CAG-G-CCGG-CT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        14723 10 -     27529 CAG-G-CCGG-CT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     14667 10 -     18194 CAG-G-CCGG-CT
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           8395 10 -     21137 CAG-G-CCGG-CT
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    7098 10 -     10723 CAG-G-CCGG-CT
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         6254 10 +      9834 CAG-G-CCGG-CT
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        24567 10 +     32220 CAG-G-CCGG-CT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5938669 10 +   6242583 CAG-G-CCGG-CT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        7921 10 +     20839 CAG-G-CCGG-CT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4292901 10 +  10818551 CAA-A-CCAG-AT
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2155334 10 +   4065304 CAA-A-CCAG-CT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     8985 10 -     10553 CAG-A-CCAG-CT
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   52967  9 -     77625 TGA-A-TGAG-A-
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4850075 10 -   5085361 TAA-A-CCag-ct
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  11146 10 +     50397 CAC-A-TTAG-CT
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11205 10 +     24756 CAC-A-TTAG-CT
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371506 10 -   5488506 TAA-A-GCAG-CT
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10430 10 -     43706 TAA-A-CCAG-CT
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                           794 10 +    224448 CAA-A-TCAG-TT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          4999 10 +     86975 TAA-A-CAAG-CT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      14655 10 +     63895 CAA-A-TCAG-CT
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Sapajus_macrocephalus.k141_351809                          55353  0 -     80660 C
e Sapajus_apella.ctg103                                    5420312  0 -   5703754 C
e Saimiri_ustus.k141_1484609                                 22990  0 -     61129 C
e Saimiri_sciureus.k141_2278166                               2728  0 -     23631 C
e Saimiri_oerstedii.k141_1487881                             39722  0 -     64574 C
e Saimiri_macrodon.k141_716185                               23094  0 +     45824 C
e Saimiri_cassiquiarensis.k141_2188234                       22999  0 +     46362 C
e Saimiri_boliviensis.NW_024100920.1                     119950543  0 - 121099817 C
e Saguinus_mystax.k141_374627                                 7632  0 -      9399 C
e Saguinus_midas.LG03                                    209468923  0 + 209938924 C
e Saguinus_labiatus.k141_285685                               8074  0 +      8564 C
e Saguinus_inustus.k141_699149                               13205  0 +     13640 C
e Saguinus_imperator.k141_2524406                             1786  0 +      2197 C
e Saguinus_bicolor.k141_2619299                               7827  0 -      8359 C
e Mico_schneideri.k141_1950671                                      5440  0 -      7356 C
e Mico_humeralifer.k141_1976199                               4501  0 +     18990 C
e Mico_argentatus.k141_1239457                                5428  0 -      7380 C
e Leontopithecus_rosalia.k141_464620                         25360  0 +     66356 C
e Leontopithecus_chrysomelas.k141_1519602                    28663  0 +     38576 C
e Leontocebus_nigricollis.k141_4610752                        7191  0 +     35603 C
e Leontocebus_illigeri.k141_3350179                           4473  0 +      4941 C
e Leontocebus_fuscicollis.k141_1820339                        7150  0 +     64341 C
e Chiropotes_albinasus.k141_2813271                          10765  0 +     11226 C
e Cebus_unicolor.k141_544048                                 49554  0 -     74725 C
e Cebus_olivaceus.k141_398305                                 1217  0 +      1777 C
e Cebus_albifrons.Contig27                                25651641  0 +  26074798 C
e Cebuella_pygmaea.k141_1309012                               5611  0 -      7577 C
e Cebuella_niveiventris.k141_1251222                          9513  0 -     11392 C
e Callithrix_kuhlii.k119_1164682                             11599  0 -     12001 C
e Callithrix_jacchus.pat_scaffold_3                       23590068  0 - 189096842 C
e Callithrix_geoffroyi.k119_512088                            4854  0 +      5267 C
e Callimico_goeldii.k141_1091182                             24360  0 +     31915 C
e Callibella_humilis.k141_1278103                             4888  0 -     10423 C
e Aotus_vociferans.k141_344750                               28279  0 -     47192 C
e Aotus_trivirgatus.k141_2152450                             15155  0 -     34685 C
e Aotus_nancymaae.KZ198451.1                               4297550  0 -   5030052 C
e Aotus_griseimembra.k141_2240599                            15153  0 -     34016 C
e Aotus_azarae.k141_3104676                                  15133  0 -     33861 C
e Alouatta_seniculus.k141_117119                             14513  0 +     50774 C
e Alouatta_puruensis.k141_1253230                             3289  0 -      3544 C
e Alouatta_palliata.k141_2135620                              3189  0 +     47717 C
e Alouatta_nigerrima.k141_3472759                            17790  0 -     18578 C
e Alouatta_macconnelli.k141_918386                             219  0 -      9457 C
e Alouatta_juara.k141_1509701                                24494  0 +     25266 C
e Alouatta_discolor.k141_743489                               3284  0 -     45847 C
e Alouatta_caraya.k141_1701091                                 218  0 -     36483 C
e Alouatta_belzebul.k141_3560514                              7096  0 +     51355 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  0 +    114563 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     26813  0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50341  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352  0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      81626  0 +    135385 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20660051  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32175  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    35084  0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasyprocta_punctata.DasPun_flattened_line_206793            1923  0 +      3576 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3569  0 +      5455 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Colobus_guereza.LG01                                   199948958  0 + 200372422 C
e Chinchilla_lanigera.JH722012.1                           1251498  0 +   2543920 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99291  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18360417  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18348157  0 -  23392119 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6399 29 +     62944 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCT-GA------A
s Acinonyx_jubatus.LLWD01001279.1                           826979 22 -   1699592 -----------------ATCCA----T---CAGT--AGGA-A---T----A-AC--TG------A
i Acinonyx_jubatus.LLWD01001279.1                        I 2 I 1
s Acomys_cahirinus.AcoCah_scaffold_12655                     70570 28 +     87051 TTAT-T--T--GTC---TGCCA----G---CA-----GAC-A---G----A-GG--TG------G
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 1
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510224 32 -  29979442 ccat-c-------c---atccatccat---aagC--AGGA-G---T----A-AC--TC------G
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 1
s Ailurus_fulgens.LNAC01001112.1                             78994 32 -    347723 ccat-c-------c---atccatccac---acac--agGA-G---T----A-AC--TC------A
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 1
s Allactaga_bullata.AllBul_scaffold_9566                     74303 20 -     89534 TCAT-CCATTCATG---T--AA----G---CA-----G---------------------------
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 8
s Allenopithecus_nigroviridis.k141_3361533                   14331 29 -     52922 TC-CTT-------T---CTCTT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         14267 29 -     28001 TC-CTT-------T---CTCCT----G---TAGC--AGGA-A---T----A-GCA-GA------A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          4763 29 -     18505 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           5616 29 -     12518 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              7096 14 +     51355 --------------------------------GC--GGGA-A---T----A-GC--GG------A
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                 218 14 -     36483 --------------------------------GC--GGGA-A---T----A-GC--GG------A
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_743489                               3284 14 -     45847 --------------------------------GC--GGGA-A---T----A-GC--GG------A
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                24494 14 +     25266 --------------------------------GC--GGGA-A---T----A-GC--GA------A
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_918386                             219 14 -      9457 --------------------------------GC--GGGA-A---T----A-GC--GA------A
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_3472759                            17790 14 -     18578 --------------------------------GC--GGGA-A---T----A-GC--GA------A
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              3189 14 +     47717 --------------------------------GC--GGGA-A---T----A-GT--GA------T
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             3289 14 -      3544 --------------------------------GC--GGGA-A---T----A-GC--GA------A
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             14513 14 +     50774 --------------------------------GC--GGGA-A---T----A-GC--GA------A
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184718 28 +    412891 CCAT-T-------C---AGCCA----C---AAGC--AGGA-G---T----A-AC--TA------A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 1
s Aotus_azarae.k141_3104676                                  15133 14 -     33861 --------------------------------GC--AGGA-A---T----A-GC--GA------A
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            15153 14 -     34016 --------------------------------GC--AGGA-A---T----A-GC--GA------A
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297550 14 -   5030052 --------------------------------GC--AGGA-A---T----A-GC--GA------A
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             15155 14 -     34685 --------------------------------GC--AGGA-A---T----A-GC--GA------A
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28279 14 -     47192 --------------------------------GC--AGGA-A---T----A-GC--GA------A
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      12321 28 +     20879 TCAT-C-------CATTCACAA----G---CA-----GAA-G---T----A-AC--AA------A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 1
s Arctocebus_calabarensis.k141_2318572                       11276 28 +     14667 GAGT-C-------C---ATCTG----C---AAGC--AGGA-G---T----C-AC--CA------A
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4125 28 +     43469 CCAT-T-------G---AGCCA----C---AAGC--AGGA-G---T----A-AC--TA------A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 1
s Avahi_laniger.k141_765380                                  53433 28 -     92717 GAGT-C-------C---ATCCA----T---AAGC--AGGA-G---T----C-AC--TG------A
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54060 28 +     85213 GAGT-C-------C---ATCCA----C---AAGC--AGGA-G---T----C-AC--TG------A
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             4888 14 -     10423 --------------------------------GC--AGGA-A---T----A-GC--GA------A
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             24360 14 +     31915 --------------------------------GC--AGGA-A---T----A-GC--GA------A
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            4854 14 +      5267 --------------------------------GC--AGGA-A---T----A-GC--AA------A
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590068 14 - 189096842 --------------------------------GC--AGGA-A---T----A-GC--GA------A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             11599 14 -     12001 --------------------------------GC--AGGA-A---T----A-GC--GA------A
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002013 34 -  17673402 CCAT-G-------C---ATCCA----C---AAGC--AGGA-A---G----C-AC--TGAAGATGA
i Camelus_bactrianus.KN276810.1                          C 0 I 1
s Camelus_dromedarius.KN272107.1                           2334471 34 -   7040546 CCAT-G-------C---ATCCA----C---AAGC--AGGA-A---G----C-AC--TGAAGATGA
i Camelus_dromedarius.KN272107.1                         C 0 I 1
s Camelus_ferus.KB017975.1                                  402754 34 -   1652518 CCAT-G-------C---ATCCA----C---AAGC--AGGA-A---G----C-AC--TGAAGATGA
i Camelus_ferus.KB017975.1                               C 0 I 1
s CanFam4.chr16                                           17798825 31 -  60362399 TTAT-C-------C---ATCCATCCAC---AAGC--AGGA-G---T----A-AC---A------A
i CanFam4.chr16                                          C 0 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184882 31 -    185531 TTAT-C-------C---ATCCATCCAC---AAGC--AGGA-G---T----A-AC---A------A
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 I 1
s Canis_lupus_dingo.QKWQ01000480.1                         9034268 31 -   9314153 ttat-c-------c---atccatccac---aagC--AGGA-G---T----A-AC---A------A
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 1
s Canis_lupus_familiaris.chr16                            17958533 31 -  59632846 ttat-c-------c---atccatccac---aagC--AGGA-G---T----A-AC---A------A
i Canis_lupus_familiaris.chr16                           C 0 I 1
s Canis_lupus_orion.HG994398.1                            18500045 31 +  63665305 ttat-c-------c---atccatccac---aagC--AGGA-G---T----A-AC---A------A
i Canis_lupus_orion.HG994398.1                           C 0 I 1
s Carlito_syrichta.NW_007247396.1                           201082 18 +    308752 TC-A-C-------C---ATCCA----C---AAGC--AGG--------------------------
i Carlito_syrichta.NW_007247396.1                        C 0 I 1
s Carollia_perspicillata.CarPer_scaffold_92756                4488 28 -     11696 CCAT-T-------C---AGCCA----C---AAGC--AGGA-G---T----A-AC--TA------A
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 1
s Castor_canadensis.CasCan_scaffold_2074                    136818 28 +    179628 TTCT-C--T--GTC---CATAA----G---CA-----GAA-G---T----A-AC--TG------A
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 1
s Catagonus_wagneri.CatWag_scaffold_2839                     92649 28 +    217609 CCAT-T-------C---ATCCA----C---AAGC--AGAA-A---G----T-AC--CG------A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 1
s Cavia_aperea.AVPZ01000300.1                             18348157  7 -  23392119 ---------------------------------------------g----a-cc--tc------a
i Cavia_aperea.AVPZ01000300.1                            C 0 I 1
s Cavia_porcellus.DS562891.1                              18360417  7 -  23407841 ---------------------------------------------G----A-CC--TC------A
i Cavia_porcellus.DS562891.1                             C 0 I 1
s Cavia_tschudii.CavTsc_scaffold_8919                        99291  7 +    143979 ---------------------------------------------G----A-CC--TC------A
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 I 1
s Cebuella_niveiventris.k141_1251222                          9513 14 -     11392 --------------------------------GC--GGGA-A---T----A-GC--GA------A
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               5611 14 -      7577 --------------------------------GC--GGGA-A---T----A-GC--GA------A
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25651641 14 +  26074798 --------------------------------GC--AGGA-A---T----A-GC--GA------A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_398305                                 1217 14 +      1777 --------------------------------GC--AGGA-A---T----A-GC--GA------A
i Cebus_olivaceus.k141_398305                            C 0 C 0
s Cebus_unicolor.k141_544048                                 49554 14 -     74725 --------------------------------GC--AGGA-A---T----A-GC--GA------A
i Cebus_unicolor.k141_544048                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         5088 18 +     31688 TC-A-C-------C---ATCCA----C---AAGC--AGG--------------------------
i Cephalopachus_bancanus.k141_1423433                    C 0 I 1
s Ceratotherium_simum.JH767749.1                          12231076 28 +  27778364 CCAT-C-------C---ATCCA----C---GAGC--AGGA-G---T----A-AC--TG------A
i Ceratotherium_simum.JH767749.1                         C 0 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2103 28 -     25243 CCAT-C-------C---ATCCA----C---GAGC--AGGA-G---T----A-AC--TG------A
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 I 1
s Cercocebus_atys.KQ010504.1                               4475276 29 +   4669795 TC-CTT-------T---CTCCC----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        13821 29 -     19203 TC-CTT-------T---CTCCC----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3342297                            437 29 -     14043 TC-CTT-------T---CTCCC----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           8473 29 +     27781 TC-CTT-------T---CTCCC----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         8638 29 -     20310 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          11617 29 +     29689 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            6371 29 -     20078 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          14296 29 -     27936 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            3161 29 -     17152 TC-CTT-------T---CTCCT----G---AAGC--AGGA-G---T----A-GCA-GA------A
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38816697 29 +  39242232 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222391 29 -  21565898 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       39509 29 -     53127 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        6776 29 +      7159 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14308 29 -     27947 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GT------A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         14285 29 +     17596 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                           330 29 +     14005 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             196 25 -      8501 CCTT-C-------C---AACCA----T---AAAC--AGGA-G---T----C-AC-----------
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             20812 28 -     52598 GAGT-C-------C---ATCCA----C---AAGC--AGGA-G---T----C-AC--TG------A
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16177 28 +     57038 GAGT-C-------C---ATCCA----C---AAGC--AGGA-G---T----C-AC--TG------A
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1251498  7 +   2543920 ---------------------------------------------G----A-CC--TC------A
i Chinchilla_lanigera.JH722012.1                         C 0 I 1
s Chiropotes_albinasus.k141_2813271                          10765 14 +     11226 --------------------------------GC--AGGA-A---A----A-GC--AA------A
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18428267 29 -  18827391 TC-CTT-------T---CTCTT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       14704 29 -     50209 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135421704 29 + 135778131 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 17970 28 +     19366 CCTT-C-------C---AACCA----T---AAAC--CAGA-G---T----A-AC--TG------A
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 I 1
s Choloepus_hoffmanni.KN194906.1                            173045 28 +    839153 CCTT-C-------C---AACCA----T---AAAC--CAGA-G---T----A-AC--TG------A
i Choloepus_hoffmanni.KN194906.1                         C 0 I 1
s Colobus_angolensis.KN981557.1                            1910209 29 +   2368649 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_polykomos.k141_906115                              36747 29 +     84244 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17547746 28 -  53390261 CCAT-C-------C---ACCCA----C---CAGC--AAGA-G---T----A-AC--TG------T
i Condylura_cristata.JH655891.1                          C 0 I 1
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14064 29 -     20389 CTAT-T-------C---ATCCA----C---AAGC--AGGA-G---T----A-AC-TTG------A
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 1
s Cricetomys_gambianus.CriGam_scaffold_18520                 49832 28 +     63868 TCAT-C-AGT---C---CACAA----C---CA-----GGC-A---G----A-GC--TG------A
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 1
s Cricetulus_griseus.LT883664.1                           11667326 28 + 224834208 TCAT-C--T--ATC---CACAT----G---CA-----GAC-G---C----A-GC--TG------A
i Cricetulus_griseus.LT883664.1                          C 0 I 1
s Crocidura_indochinensis.CroInd_scaffold_37019               2639 28 -     19598 CCAT-T-------A---ATCCA----C---AAAC--AGGA-G---T----A-AC--TG------A
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28136 28 -     87169 CCAT-C-------C---ATCCA----T---CAGT--AGGA-G---T----A-AC--TG------A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 1
s Ctenodactylus_gundi.CteGun_scaffold_65                    836829 25 +   1526836 TCCT-C-------C---CACAA----C---CA-----CGA-G---T----A-AC--TG------A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 1
s Cuniculus_paca.CunPac_flattened_line_231100                 3569  7 +      5455 ---------------------------------------------G----A-CC--TC------A
i Cuniculus_paca.CunPac_flattened_line_231100            C 0 I 1
s Dasyprocta_punctata.DasPun_flattened_line_206793            1923  7 +      3576 ---------------------------------------------A----A-CC--TC------A
i Dasyprocta_punctata.DasPun_flattened_line_206793       C 0 I 1
s Dasypus_novemcinctus.JH564415.1                            63195 28 +   2246927 CCTT-C-------C---AACCA----A---AAAC--AGGA-G---T----C-CC--TG------A
i Dasypus_novemcinctus.JH564415.1                        C 0 I 1
s Daubentonia_madagascariensis.ctg71                      12537041 28 -  12879189 GAGT-C-------C---GGCTG----C---AAGC--AGGA-G---T----C-CC--TG------A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8629502 28 +  20541912 CCAT-T-------C---AGCCA----C---AGGC--AGCA-G---T----A-AC--TA------A
i Desmodus_rotundus.KZ672289.1                           C 0 I 1
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672927 28 +   1390856 CCAT-C-------C---ATCCA----C---GCGC--AGGA-G---T----A-AC--TG------A
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 1
s Diceros_bicornis.DicBicMic_scaffold_5955                    5679 28 +    198055 CTAT-C-------C---ATCCA----C---GAGC--AGGA-G---T----A-AC--TG------A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 1
s Dinomys_branickii.DinBra_scaffold_21862                    35084  7 +     67921 ---------------------------------------------G----A-CC--TC------A
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 1
s Dolichotis_patagonum.DolPat_scaffold_30833                 32175  7 -     42551 ---------------------------------------------G----A-CC--TC------A
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 I 1
s Echinops_telfairi.JH980293.1                            48780066 28 + 111700974 CCAT-C-------C---AACCT----C---CAGC--AAAA-A---T----A-AC--CA------A
i Echinops_telfairi.JH980293.1                           C 0 I 8
s Eidolon_helvum.KE759718.1                                  10173 28 +     11740 TCAC-T-------C---ATCCA----C---AAGC--AGGA-A---T----A-AT--TG------A
i Eidolon_helvum.KE759718.1                              C 0 I 1
s Elephantulus_edwardii.JH947257.1                         1097367 28 +  10337057 CCAT-C-------C---AACCA----C---AAAC--ATTA-G---T----A-AC--TG------A
i Elephantulus_edwardii.JH947257.1                       C 0 I 1
s Ellobius_lutescens.LOEQ01008920.1                          20066 28 -    110024 TCAT-CCAT----C---CACAA----G---CA-----AAC-A---G----A-GC--TG------A
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 8
s Ellobius_talpinus.LOJH01081419.1                             197 28 +      8657 TCAT-CCGT----C---CACAA----G---CA-----GAC-A---G----A-GC--TG------A
i Ellobius_talpinus.LOJH01081419.1                       C 0 I 8
s Enhydra_lutris.KZ291758.1                               16328963 35 -  41312741 ccat-c-------c---atccatccac---aagG--AGGA-GTAGT----A-AC--TC------A
i Enhydra_lutris.KZ291758.1                              C 0 I 1
s Eptesicus_fuscus.JH977646.1                              2145086 28 -  14770903 TCAT-T-------C---AGCCA----C---AAGC--AGGA-G---T----A-AC--TA------A
i Eptesicus_fuscus.JH977646.1                            C 0 I 297
s Equus_asinus.JREZ01000139.1                              1283197 28 +   4378816 CCAT-C-------C---ATCCA----C---AAGA--AGGA-G---T----A-AG--TG------A
i Equus_asinus.JREZ01000139.1                            C 0 I 1
s Equus_caballus.CM000403.2                               18531017 28 -  39960074 CCAT-C-------C---ATCCA----C---AAGA--AGGA-G---T----A-AG--TA------A
i Equus_caballus.CM000403.2                              C 0 I 1
s Equus_przewalskii.KK951119.1                               33046 28 +    498745 CCAT-C-------C---ATCCA----C---AAGA--AGGA-G---T----A-AG--TA------A
i Equus_przewalskii.KK951119.1                           C 0 I 1
s Erinaceus_europaeus.JH835339.1                           3327974 28 -   7059049 CTGT-T-------T---ATCTA----C---AAGC--AGTA-T---T----A-AC--CA------A
i Erinaceus_europaeus.JH835339.1                         I 524 I 1
s Erythrocebus_patas.Contig38                             21204874 29 -  21539334 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13537 28 -     14127 GAGT-C-------C---ATCCA----C---AAGC--AGGA-G---T----C-AC--TG------A
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6238 28 -     16928 GAGT-C-------C---ATCCA----C---AAGC--AGGA-G---T----C-AC--TG------A
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15264 28 -     25546 GAGT-C-------C---ATCCA----C---AAGC--AGGA-G---T----C-AC--TG------A
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12468 28 +     26330 GAGT-T-------C---ATCCA----C---AAGC--AGGA-G---T----A-AC--TG------A
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 13701 28 +     23973 GAGT-C-------C---ATCCA----C---AAGC--AGGA-G---T----C-AC--TG------A
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12465 28 +     75513 GAGT-T-------C---ATCCA----C---AAGC--AGGA-G---T----C-AC--TG------A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10396 28 +     97555 GAGT-C-------C---ATCCA----C---AAGC--AGGA-G---T----C-AC--TG------A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            13327 28 +     26496 GAGT-C-------C---ATCCA----C---AAGC--AGGA-G---T----C-AC--TG------A
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  3937 28 -     17153 GAGT-C-------C---ATCCA----C---AAGC--AGGA-G---T----C-AC--TG------A
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13512 28 +    111500 GAGT-C-------C---ATCCA----C---AAGC--AAGA-G---T----C-AC--TG------A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20236630 22 + 206538554 -----------------ATCCA----T---CAGG--AGGA-A---T----A-AC--TG------A
i Felis_catus.CM001381.2                                 I 2 I 1
s Felis_catus_fca126.CM031415.1                           20195473 22 + 205367284 -----------------ATCCA----T---CAGG--AGGA-A---T----A-AC--TG------A
i Felis_catus_fca126.CM031415.1                          I 2 I 1
s Felis_nigripes.FelNig_flattened_line_20823                  8987 22 -     36744 -----------------ATCCA----T---CAGG--AGGA-A---T----A-AC--TG------A
i Felis_nigripes.FelNig_flattened_line_20823             I 2 I 1
s Galago_moholi.ctg2040                                     426410 28 -    453645 GAGT-C-------C---ATCTG----C---AAGC--AGAA-G---C----C-AC--CA------A
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4101 28 +     11339 GAGT-C-------C---ATCTG----C---AAGC--AGAA-G---C----C-AC--CA------A
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            1415 28 +     41679 GAGT-C-------C---ATCTG----C---AAGG--AGAA-G---T----C-AC--CA------A
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840                873 28 -      9135 TCAT-C-------C---ATGAC----C---AAGC--AAGA-G---T----A-AC--TG------A
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 I 1
s Gorilla_beringei.k141_3596273                              15654 29 -     32273 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCT-GA------A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186337800 29 + 186649187 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCT-GA------A
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6583 28 -     19426 GAGT-C-------C---ATCCA----C---AAGC--AGGA-G---T----C-AC--TG------A
i Hapalemur_alaotrensis.k141_170648                      C 0 I 8
s Hapalemur_gilberti.k141_488810                             11732 28 -     15286 GAGT-C-------C---ATCCA----C---AAGC--AGGA-G---T----C-AC--TG------A
i Hapalemur_gilberti.k141_488810                         C 0 I 8
s Hapalemur_griseus.k141_1511508                             13371 28 +     18253 GAGT-C-------C---ATCCA----C---AAGC--AGGA-G---T----C-AC--TG------A
i Hapalemur_griseus.k141_1511508                         C 0 I 8
s Hapalemur_meridionalis.k141_248335                         13472 28 -     41752 GAGT-C-------C---ATCCA----C---AAGC--AGGA-G---T----C-AC--TG------A
i Hapalemur_meridionalis.k141_248335                     C 0 I 8
s Hapalemur_occidentalis.k141_907772                         13309 28 -     16460 GAGT-C-------C---ATCCA----C---AAGC--AGGA-G---T----C-AC--TG------A
i Hapalemur_occidentalis.k141_907772                     C 0 I 8
s Helogale_parvula.HelPar_flattened_line_2585               241970 28 +    327341 CCAC-C-------C---ATCCA----T---CAGT--AGGA-G---T----A-AC--TG------A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 1
s Heterocephalus_glaber.JH602082.1                        20660051  7 +  22651954 ---------------------------------------------G----A-CC--CC------A
i Heterocephalus_glaber.JH602082.1                       C 0 I 1
s Heterohyrax_brucei.HetBruBak_scaffold_122365                 541 28 +      7595 CCAT-C-------C---AGTCA----C---AAGC--AGGA-G---G----A-AA--GG------G
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 I 1
s Hoolock_leuconedys.ctg274                                    434466 29 +    630532 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCT-GA------A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  44664 28 +     55795 CCAC-C-------C---ATCCA----T---CAGT--AGGA-G---T----A-AG--TG------G
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 1
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20547  7 -    143317 ---------------------------------------------G----A-CC--TC------A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 1
s Hylobates_agilis.k141_232023                                2232 29 -     12752 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCT-GA------A
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                               2276 29 +     14092 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCT-GA------A
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189543059 29 - 191637585 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCT-GA------A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3335954 29 -  11177569 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCT-GA------A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      81626  7 +    135385 ---------------------------------------------G----A-CC--TC------A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 1
s Ictidomys_tridecemlineatus.JH393364.1                    7520624 28 -   7955117 TTAT-C-------CATTAACAA----G---TA-----GAA-G---T----A-AT--GG------A
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 1
s Indri_indri.k141_3655594                                   22254 28 +     31101 GAGT-C-------C---ATCCA----C---AAGC--AGGA-G---T----C-AC--TA------A
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8276578 20 -   9596543 TCGT-CCATTCATT---C--AA----G---CA-----G---------------------------
i Jaculus_jaculus.JH725527.1                             C 0 I 8
s Lasiurus_borealis.LasBor_scaffold_32767                    13504 28 -     42476 TCAT-T-------C---AGCCA----C---AAGC--AGGA-G---T----A-AC--TA------A
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 301
s Lemur_catta.scaffold_24                                 15523816 28 -  30322482 GAGT-C-------C---ATCCA----C---AAGC--AGGA-G---T----C-AC--TG------A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7150 14 +     64341 --------------------------------GC--AGGA-A---A----A-GC--AA------A
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           4473 14 +      4941 --------------------------------GC--AGGA-A---A----A-GC--AA------A
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        7191 14 +     35603 --------------------------------GC--AGGA-A---A----A-GC--AA------A
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    28663 14 +     38576 --------------------------------GC--AGGA-A---C----A-GC--GA------A
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         25360 14 +     66356 --------------------------------GC--AGGA-A---C----A-GC--GA------A
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         10714 28 -     23766 GAGT-C-------C---ATCCA----C---AAGC--AGGA-G---T----C-AC--TG------A
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             28775 28 +     45836 GAGT-C-------C---ATCCA----C---AAGC--AGGA-G---T----C-AC--TG------A
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1312 27 +     25010 GAG--C-------C---ATCCA----C---AAGC--AGGA-G---T----C-AC--TG------A
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      26711 28 +     54090 GAGT-C-------C---ATCCA----C---AAGC--AGGA-G---T----C-AC--TG------A
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3042489 32 +   3914936 ccat-c-------c---atccatccac---aagC--AGGA-G---T----A-AC--TC------A
i Leptonychotes_weddellii.KB714746.1                     C 0 I 1
s Lepus_americanus.LepAme_scaffold_107385                     6160 28 -     14121 TTA--C-------T---GTCTA----C---AAGC---AGAAG---T----AAAC--TT------A
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 1
s Lophocebus_aterrimus.ctg367                              1436823 29 +   1826925 TC-CTT-------T---CTCCA----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5658 28 +     11245 GAGT-C-------C---ATCTG----C---AAGC--AGGA-G---T----C-AC--CA------A
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004478 28 +   6120653 GAGT-C-------C---ATCTG----C---AAGC--AGGA-G---T----C-AC--CA------A
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4216981 10 -  43346337 CCAT-C-------C---AACC--------------------------------------------
i Loxodonta_africana.GL010049.1                          C 0 I 7
s Lycaon_pictus.CM007581.1                                17954773 31 -  59628241 ttat-c-------c---atccatccac---aagC--AGGA-G---T----A-AC---A------A
i Lycaon_pictus.CM007581.1                               C 0 I 1
s Macaca_arctoides.k141_2326796                               6633 29 +     40492 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59675892 29 +  60120075 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 12405 29 -     26193 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            80189 29 -    114318 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  5880 29 -     23192 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                15349 29 -     29190 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  23914 29 +     37952 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186839003 29 + 187317192 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25457566 29 -  25927173 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  79762 29 +     89720 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 6763 29 +     20474 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   6563 29 -     14993 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  329429 29 -    668171 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 4879 29 -     24072 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               25501 29 -     45290 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90270 28 +     94391 TCAT-T-------C---ATCCA----C---AAGC--AGAA-T---T----A-AT--TG------A
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 1
s Mandrillus_leucophaeus.scaffold280                      23937096 29 -  24302211 TC-CTT-------T---CTCCC----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               351224 29 +    752769 TC-CTT-------T---CTCCC----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33102808 28 -  40650429 TTAT-C-------CATTAACAA----G---TA-----GAA-G---T----A-AT--GG------A
i Marmota_marmota.CZRN01000018.1                         C 0 I 8
s Megaderma_lyra.MegLyr_scaffold_4542                         9979 28 -    207569 CTGT-T-------C---ATTCA----C---AATC--AGGG-G---T----A-AC--TG------A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 1
s Mellivora_capensis.MelCap_flattened_line_69365              9680 32 +     13704 CCAT-C-------C---ATCCATCCAC---AAGC--AGGA-G---T----A-AC--TC------A
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 1
s Meriones_unguiculatus.MerUng_scaffold_7390                 32507 28 +    140813 TCGT-C--T--GTC---CACAA----G---CA-----GAT-A---G----A-GG--TA------G
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 1
s Mesocricetus_auratus.KB708134.1                         12182004 28 -  29670104 TCAT-C--T--GTC---CACAA----G---CA-----GAC-A---G----A-GC--TA------A
i Mesocricetus_auratus.KB708134.1                        C 0 I 1
s Mico_argentatus.k141_1239457                                5428 14 -      7380 --------------------------------GC--AGGA-A---T----A-GC--GA------A
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               4501 14 +     18990 --------------------------------GC--AGGA-A---T----A-GC--GA------A
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      5440 14 -      7356 --------------------------------GC--AGGA-A---T----A-GC--GA------A
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18291236 28 -  93316391 GAGT-C-------C---GTCCA----C---AAGC--AGGA-G---T----C-AC--TG------A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    21803 28 -    145209 TCAT-C-------C---AGCTT----T---CAGA--AACA-A---T----A-AT--CA------A
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 1
s Micronycteris_hirsuta.MicHir_scaffold_52381                15043 28 -     19307 CCAT-T-------C---AGCCA----C---AAGC--AGGA-G---T----A-AC--TG------A
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 1
s Miniopterus_natalensis.LDJU01000034.1                    1850279 28 +   8254450 CCAT-T-------C---AGCCC----C---AAGC--AGAA-G---T----C-AC--TA------G
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 11
s Miniopterus_schreibersii.MinSch_scaffold_18080             33956 28 +     64694 CCAT-T-------C---AGCCC----C---AAGC--AGAA-G---T----C-AC--TA------G
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 11
s Miopithecus_ogouensis.k141_534055                           8822 29 -     28506 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-TCA-GA------A
i Miopithecus_ogouensis.k141_534055                      C 0 I 9
s Mirounga_angustirostris.MirAng_flattened_line_93702         5357 32 -      8324 CCAT-C-------C---ATCCATCCAC---AAGC--AGGA-G---T----A-AC--TC------A
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 1
s Mirza_zaza.k141_952172                                      8781 28 -     37649 GAGT-C-------C---GTCCA----C---AAGC--AGGA-G---T----C-AC--TG------A
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 140986 27 -    366855 CCAT-T-------C---AGCCA----C---AAGC--AGGA-G---T----A-AC--C-------A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 1
s Mungos_mungo.MunMun_flattened_line_23663                   35069 28 +     37127 CCAC-C-------C---ATCCA----T---CAGT--AGGA-G---T----A-AT--GG------G
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 1
s Murina_feae.MurFea_scaffold_85699                           6139 28 +     14753 TCAT-T-------C---AGCCA----C---AAGC--AGGA-G---T----A-AC--CC------A
i Murina_feae.MurFea_scaffold_85699                      C 0 I 321
s Mus_caroli.LT608237.1                                   84361124 28 - 120012414 GTAT-C--T-C-TC---CACAA----G---CA-----GAC-G---A----A-GG--TG------G
i Mus_caroli.LT608237.1                                  C 0 I 1
s Mus_musculus.chr8                                       87650122 28 - 129401213 GTAT-C--T--GTC---CACAA----G---CA-----GAT-G---A----A-GG--TG------G
i Mus_musculus.chr8                                      C 0 I 1
s Mus_pahari.LT608297.1                                   31354778 28 -  89631738 GTAT-C--T--GTC---CACAA----G---CA-----GAC-A---G----A-GG--TG------G
i Mus_pahari.LT608297.1                                  C 0 I 1
s Mus_spretus.CM004101.1                                  90752183 28 - 130317789 GTAT-C--T--GTC---CACAA----G---CA-----GAC-G---A----A-GG--TA------G
i Mus_spretus.CM004101.1                                 C 0 I 1
s Mustela_putorius.JH418006.1                               300864 32 -  14710649 CCAT-C-------C---AGCCATCCAC---AAGG--AGGA-G---T----A-AC--TC------A
i Mustela_putorius.JH418006.1                            C 0 I 1
s Myotis_brandtii.KE162005.1                                279322 28 -  10118263 TCAT-T-------C---AGCCA----C---AAGC--AGAA-G---T----A-AC--TC------G
i Myotis_brandtii.KE162005.1                             C 0 I 783
s Myotis_davidii.KB100139.1                                1587015 28 -   6019432 TCAT-T-------C---AGCCA----C---AAGC--AGAA-G---T----A-AC--TC------G
i Myotis_davidii.KB100139.1                              C 0 I 358
s Myotis_lucifugus.GL429869.1                              3903087 28 -   4330536 TCAT-T-------C---AGCCA----C---AAGC--AGAA-G---T----A-AC--TC------A
i Myotis_lucifugus.GL429869.1                            C 0 I 372
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              188904 28 +    196477 CCTT-C-------C---AACCA----C---AAAA--AGGA-G---T----A-AC--TG------A
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 I 1
s Nannospalax_galili.KL204047.1                            2033825 28 -   3037898 TCAT-C--T--GTC---CACAA----A---CA-----TAC-A---A----A-TC--TG------A
i Nannospalax_galili.KL204047.1                          C 0 I 1
s Nasalis_larvatus.k141_413338                               14796 29 +     21681 TC-CCT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306611 32 +  31847680 ccat-c-------t---atccatccac---aaGG--AGGA-G---T----A-AC--TC------A
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 1
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149027 31 -   9404916 ctat-c-------c---atccatccac---aagC--AGGA-G---T----A-AC---A------A
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 1
s Nycticebus_bengalensis.LG01                            102579450 28 - 196305487 GAGT-C-------C---ATCTG----C---AAGC--AGGA-G---T----C-AC--CA------A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_771082                              1295 28 -      2667 GAGT-C-------C---ATCTG----C---AAGC--AGGA-G---T----C-AC--CA------A
i Nycticebus_coucang.k141_771082                         C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749878 28 + 199412804 GAGT-C-------C---ATCTG----C---AAGC--AGGA-G---T----C-AC--CA------A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                              506296 32 -   2017862 ccat-c-------c---atccatccac---aagC--AGGA-G---T----A-AT--TC------A
i Odobenus_rosmarus.KB229312.1                           C 0 I 1
s Ondatra_zibethicus.OndZib_scaffold_46174                   24913 28 +     28053 TCAT-CGGT----C---CACAA----G---CA-----GAG-A---G----A-GC--TG------A
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 8
s Onychomys_torridus.OnyTor_scaffold_2986                    79908 28 +    102263 TCAT-C-AGT---C---CGCAA----G---CA-----GAT-G---G----A-GC--TG------A
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 1
s Orycteropus_afer.OryAfe_flattened_line_144387               9488 28 -     18566 CCAT-C-------C---AACCA----C---AAGC--AGGA-G---T----A-AC--TG------G
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 I 1
s Oryctolagus_cuniculus.CM000791.1                        67147042 29 + 174332312 TTAT-C-------T---GTCTA----C---AAGC---AGAAG---T----AAAC--TT------A
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 1
s Otocyon_megalotis.JAEUCK010005147.1                       461995 31 -    559221 ctat-c-------c---atccatccac---aagC--AGGA-G---T----A-AC---A------A
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 1
s Otolemur_crassicaudatus.k141_222918                         3942 28 +      8798 GAGT-G-------C---ATCTG----C---AAGC--AGAA-G---T----C-AC--CA------A
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696105 28 -   1103335 GAGT-G-------C---ATCTG----C---AAGC--AGAA-G---T----C-AC--CA------A
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    43747 29 +     80009 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCT-GA------A
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189142655 29 + 189151597 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCT-GA------A
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  150832 22 +    230217 -----------------ATCCA----T---CAGT--AGGA-A---T----A-AC--TG------A
i Panthera_onca.PanOnc_flattened_line_3271               I 2 I 1
s Panthera_pardus.KV860321.1                                264038 22 +  18783137 -----------------ATCCA----T---CAGT--AGGA-A---T----A-AC--TG------A
i Panthera_pardus.KV860321.1                             I 2 I 1
s Panthera_tigris.KE722367.1                               4720917 22 -   8748460 -----------------ATCCA----T---CAGT--AGGA-A---T----A-AC--TG------A
i Panthera_tigris.KE722367.1                             I 2 I 1
s Papio_anubis.CM001495.2                                183442846 29 + 183742232 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---C----A-GCA-GA------A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             6544 29 +     20448 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---C----A-GCA-GA------A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563352 29 +  20919399 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---C----A-GCA-GA------A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   5288 29 +     41871 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---C----A-GCA-GA------A
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     8573 29 +     27711 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---C----A-GCA-GA------A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  8654 29 +      9205 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---C----A-GCA-GA------A
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12303 28 -     78924 CCAT-C-------C---ATCCA----T---CAGT--AGGA-G---T----A-AC--TG------A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 1
s Perodicticus_ibeanus.k141_855320                            9911 29 +     13100 GAGC-C-------C---TCCTG---GC---AAGC--AGGA-G---T----C-AC--CA------A
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8317 29 +     25941 GAGC-C-------C---TCCTG---GC---AAGC--AGGA-G---T----C-AC--CA------A
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18194532 28 -  18517816 TCAT-C-AGT---C---CTAaa----g---ca-----gac-a---g----a-gc--tg------a
i Peromyscus_maniculatus.KI615324.1                      C 0 I 1
s Petromus_typicus.PetTyp_scaffold_42190                     26813  7 -     29689 ---------------------------------------------G----T-CC--TC------A
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 I 1
s Piliocolobus_badius.k141_1234363                           43307 29 +     62158 TC-CTT-------T---CTCCC----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        38038 29 +     89929 TC-CTT-------T---CTCCC----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            39454 29 +     51399 TC-CTT-------T---CTCCC----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14295692 29 -  14605196 TC-CTT-------T---CTCCA----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1479 28 +     22620 TTGT-T-------C---AGCCA----C---AGGC--AGGA-G---T----A-AC--TA------A
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 165
s Pongo_abelii.CM009266.2                                189130789 29 + 189387572 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCT-GA------A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570397 29 +   9816681 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCT-GA------A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               72976 29 -     81375 TC-CCT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              4796 29 +     19060 TC-CCT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 12996 28 -     22811 CCAT-C-------C---AGTCA----C---AAGC--AGGA-G---G----A-AA--GG------G
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 I 1
s Prolemur_simus.MPIZ01000396.1                            2596496 28 -   4620579 GAGT-C-------C---ATCCA----C---AAGC--AGGA-G---T----C-AC--TG------A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990477 28 +   2598838 GAGT-C-------C---ATCCA----C---AAGC--AGGA-G---T----C-AC--TG------A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          28789 28 +     38485 GAGT-C-------C---ATCCA----C---AAGC--AGGA-G---T----C-AC--TG------A
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                               832 28 -     13098 GAGT-C-------T---ATCCA----C---AAGC--AGGA-C---T----C-AC--TG------A
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26310 28 +     35766 GAGT-C-------C---ATCCA----C---AAGC--AGGA-G---T----C-AC--TG------A
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4497 28 -     24134 GAGT-C-------C---ATCCA----C---AAGC--AGGA-G---T----C-AC--TG------A
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28322 28 -     67325 GAGT-C-------C---ATCCA----C---AAGC--AGGA-G---T----C-AC--TG------A
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4545 28 -      6182 GAGT-C-------C---ATCCA----C---AAGC--AGGA-G---T----C-AC--TG------A
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            10146 28 -     21651 TCGT-C--T--GTC---CACAA----G---CA-----GAC-A---G----A-GG--TA------G
i Psammomys_obesus.NESX01036370.1                        C 0 I 1
s Pteronotus_parnellii.KE909381.1                            14328 28 -     21811 acat-t-------c---agcca----c---aggc--aggA-G---G----A-AC--CA------A
i Pteronotus_parnellii.KE909381.1                        C 0 I 8
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39880 32 +     42204 CCAT-C-------C---ATCCATCCAC---AAGC--AGGA-G---C----A-AC--TC------A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 1
s Pteropus_alecto.KB030862.1                              22976430 28 +  28871421 TCAC-T-------C---ATCCA----C---AAGC--Aaga-a---t----a-at--tg------a
i Pteropus_alecto.KB030862.1                             C 0 I 1
s Pteropus_vampyrus.KN525825.1                             1359516 28 +   4952924 TCAC-T-------C---ATCCA----C---AAGC--Aaga-a---t----a-at--tg------a
i Pteropus_vampyrus.KN525825.1                           C 0 I 1
s Puma_concolor.QAVW01001104.1                            20273986 22 -  38429054 -----------------ATCCA----T---CAGT--AGGA-A---T----A-AC--TG------A
i Puma_concolor.QAVW01001104.1                           I 2 I 1
s Pygathrix_cinerea.k141_1153803                             14805 29 -     91421 TC-CCT-------G---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7608925 29 +   7812017 TC-CCT-------G---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             14777 29 -     72585 TC-CCT-------G---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53570387 28 +  90668790 TTAT-C--T--GTC---CTCAA----G---CA-----GAC-A---G----G-GG--TG------G
i Rattus_norvegicus.chr16                                C 0 I 1
s Rhinopithecus_bieti.k119_217274                             6492 29 -     11128 TC-CCT-------T---CTCCT----G---AAGC--AGGA-A---C----A-ACA-GA------A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91235847 29 - 195417433 TC-CCT-------T---CTCCT----G---AAGC--AGGA-A---C----A-GCA-GA------A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7671497 29 +   7961872 TC-CCT-------T---CTCCT----G---AAGC--AGGA-A---C----A-ACA-GA------A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87451 28 -     96226 TCAT-T-------C---ATCCA----C---AAGC--AGGA-A---T----A-AT--TG------A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 1
s Saguinus_bicolor.k141_2619299                               7827 14 -      8359 --------------------------------GC--AGGA-A---A----A-GC--AA------A
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_imperator.k141_2524406                             1786 14 +      2197 --------------------------------GC--AGGA-A---A----A-GC--AA------A
i Saguinus_imperator.k141_2524406                        C 0 C 0
s Saguinus_inustus.k141_699149                               13205 14 +     13640 --------------------------------GC--AGGA-A---A----A-GC--AA------A
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               8074 14 +      8564 --------------------------------GC--AGGA-A---A----A-GC--AA------A
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209468923 14 + 209938924 --------------------------------GC--AGGA-A---A----A-GC--AA------A
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 7632 14 -      9399 --------------------------------GC--AGGA-A---A----A-GC--AA------A
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119950543 14 - 121099817 --------------------------------GC--AGGA-A---T----A-GC--AA------A
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       22999 14 +     46362 --------------------------------GC--AGGA-A---T----A-GC--AA------A
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               23094 14 +     45824 --------------------------------GC--AGGA-A---T----A-GC--AA------A
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             39722 14 -     64574 --------------------------------GC--AGGA-A---T----A-GC--AA------A
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               2728 14 -     23631 --------------------------------GC--AGGA-A---T----A-GC--AA------A
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 22990 14 -     61129 --------------------------------GC--AGGA-A---T----A-GC--AA------A
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420312 14 -   5703754 --------------------------------GC--AGGA-A---T----A-GC--GA------A
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          55353 14 -     80660 --------------------------------GC--AGGA-A---T----A-GC--GA------A
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    152819 28 -    313613 CCAT-T-------C---ACCCA----C---CAGT--GGGA-G---T----A-AC--TG------T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 1
s Semnopithecus_entellus.k141_11662                          19316 29 -     19888 TC-CCT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26519 29 +     39453 TC-CCT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            7038 29 +     27826 TC-CCT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             6559 29 -     19483 TC-CCT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      6627 29 +      7198 TC-CCT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         14885 29 +     15514 TC-CCT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11644 27 -     12148 TCAT-TGGT----C---CACAA----G---CA-----GAC-A---G----A-G---TG------A
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 I 1
s Solenodon_paradoxus.SolPar_flattened_line_126               3444 28 +   1910179 CCAT-C-------C---ATCCA----C---GAGA--AAGA-G---T----A-AG--TG------A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 1
s Sorex_araneus.JH798187.1                                13650688 27 -  18376816 TCAT-T-------A---ATCCA----C---AAAC--AGGA-G---T----T-G---TG------A
i Sorex_araneus.JH798187.1                               C 0 I 1
s Spermophilus_dauricus.KZ294078.1                         1953678 28 -   3870691 TTAT-C-------CATTAACAA----G---TA-----GAA-G---T----A-AT--GG------A
i Spermophilus_dauricus.KZ294078.1                       C 0 I 8
s Spilogale_gracilis.SpiGra_flattened_line_13525             30380 37 +     97271 CCAT-C-------C---ATCTATCCATCCAAAGCAGAGGA-G---T----A-AC--TC------A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 1
s Suricata_suricatta.SurSur_flattened_line_6629              17970 28 -    196729 CCAT-C-------C---ATCCA----T---CAGT--AGGA-G---T----A-AC--TG------A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 1
s Sus_scrofa.CM000828.4                                    6810144 28 +  69701581 CCAT-T-------C---ATCCA----C---CAGC--AGAA-A---G----A-AC--TG------A
i Sus_scrofa.CM000828.4                                  C 0 I 1
s Symphalangus_syndactylus.tarseq_199                      1093101 29 -   1523678 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCT-CA------A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                10141 28 +     41958 CCAT-T-------C---AGCCA----C---AAGT--AGGA-G---C----A-AC--TA------A
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 1
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72259 28 +    116680 CCTT-C-------C---AACCA----C---AAAA--AGAA-A---T----A-AC--TG------A
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 I 1
s Tapirus_indicus.TapInd_scaffold_9301                      118399 28 -    156842 CCAT-C-------C---ATCCA----C---AGGC--AGGA-G---T----G-AC--TG------A
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 1
s Tapirus_terrestris.TapTer_scaffold_755                    386856 28 +    539355 CCAT-C-------C---ATCCA----C---AGGC--AGGA-G---T----A-AC--TG------A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 1
s Tarsius_lariang.k141_2201908                               26090 18 +     70052 TC-A-C-------C---ATCCA----C---AAGC--AGG--------------------------
i Tarsius_lariang.k141_2201908                           C 0 I 1
s Tarsius_wallacei.k141_254427                                 923 18 -     16117 TC-A-C-------C---ATCCA----C---AAGC--AGG--------------------------
i Tarsius_wallacei.k141_254427                           C 0 I 1
s Theropithecus_gelada.CM009954.1                        186428216 29 + 186847797 TC-CTT-------T---CTCCT----G---AAGC--AGGA-A---C----A-GCA-GA------A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103937  7 +    114563 ---------------------------------------------G----G-GC--TT------A
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 1
s Tolypeutes_matacus.TolMat_scaffold_228639                   6084 28 +      8208 CCTC-C-------C---AACCA----T---AACC--AGGA-G---T----C-AC--TG------A
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 I 1
s Tonatia_saurophila.TonSau_scaffold_294                     80573 32 +    610378 CCAT-T-------C---AGCCA----C---AAGC--AGGA-G---TAAGTA-AC--TG------A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 1
s Trachypithecus_auratus.k141_722599                         10610 29 -     20410 TC-CCC-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    14804 29 +     15221 TC-CCT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                       10711 29 +     19930 TC-CCC-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       7138 29 -     19997 TC-CCT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            47262 29 -     60166 TC-CCT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        14733 29 -     27529 TC-CCT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     14677 29 -     18194 TC-CCT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           8405 29 -     21137 TC-CCT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    7108 29 -     10723 TC-CCT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         6264 29 +      9834 TT-CCT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        24577 29 +     32220 TC-CCT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5938679 29 +   6242583 TC-CCT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        7931 29 +     20839 TC-CCT-------T---CTCCT----G---AAGC--AGGA-A---T----A-GCA-GA------A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4292911 28 +  10818551 CCAT-C-------C---GCCCA----C---AAGC--AGGA-G---T----C-CC--TG------A
i Trichechus_manatus.JH594705.1                          C 0 I 1
s Tupaia_chinensis.KB320699.1                              2155344 28 +   4065304 TCTT-C-------C---ATCCA----T---GGGC--AAGA-G---T----A-AC--TG------G
i Tupaia_chinensis.KB320699.1                            C 0 I 1
s Tupaia_tana.TupTan_flattened_line_97126                     8995 28 -     10553 TCTT-C-------C---ATCCA----T---AGGC--AAGA-G---T----A-AC--TG------G
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 1
s Uropsilus_gracilis.UroGra_scaffold_12083                   52976 28 -     77625 CCAT-C-------T---ATCCA----T---AAGC--AGAC-G---C----A-AC--TG------A
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 1
s Ursus_maritimus.KK499267.1                               4850085 32 -   5085361 ccat-c-------c---atccatccac---aagC--AGGA-G---T----A-AC--TC------G
i Ursus_maritimus.KK499267.1                             C 0 I 1
s Varecia_rubra.k141_590885                                  11156 28 +     50397 GAGT-C-------C---ATCCA----C---AAGC--AGGA-G---T----C-AC--TG------A
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11215 28 +     24756 GAGT-C-------C---ATCCA----C---AAGC--AGGA-G---T----C-AC--TG------A
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371516 34 -   5488506 CCAT-G-------C---ATCCA----C---AAGC--AGGA-A---G----C-AC--TGAAGATGA
i Vicugna_pacos.KN270157.1                               C 0 I 1
s Vulpes_lagopus.VulLag_flattened_line_30954                 10440 31 -     43706 CTAT-C-------C---ATCAAACCAC---AAGC--AGGA-G---T----A-AC---A------A
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 1
s Xerus_inauris.XerIna_scaffold_2302                           804 27 +    224448 TCAT-C-------CATTAACAA----G---TA-----G-A-G---T----A-AT--GG------A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 1
s Zalophus_californianus.ZalCal_flattened_line_17732          5009 32 +     86975 CCAT-C-------C---ATCCATCCAC---AAGC--AGAA-G---T----A-AT--TC------A
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 1
s Zapus_hudsonius.ZapHud_scaffold_11398                      14665 22 +     63895 TTCT-CCAACCAAT---CACAA----G---CA-----G---------------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 8
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1363382  0 +   3988456 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50341  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352  0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Colobus_guereza.LG01                                   199948958  0 + 200372422 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6428 24 +     62944 GG-ATCTC--CC--T-A-GCCCACCTTA-GAT
s Acinonyx_jubatus.LLWD01001279.1                           827002 24 -   1699592 GA-AACTC--TG--C-A-ACCCAGAGTA-AAT
i Acinonyx_jubatus.LLWD01001279.1                        I 1 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     70599 22 +     87051 G--AA-AC--AT--C-C-ACACACAGTA-AAC
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 1 I 23
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510257 25 -  29979442 GA-AACCC--TC--CAA-ATCCAAAGTG-AAC
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 1 C 0
s Ailurus_fulgens.LNAC01001112.1                             79027 25 -    347723 GA-AACTC--TC--CAA-ATCCAAAGTG-AGC
i Ailurus_fulgens.LNAC01001112.1                         I 1 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     74331 13 -     89534 G--GCTCT--CT--T-A-GTC-----------
i Allactaga_bullata.AllBul_scaffold_9566                 I 8 I 7
s Allenopithecus_nigroviridis.k141_3361533                   14360 24 -     52922 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         14296 24 -     28001 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          4792 24 -     18505 GG-AGCTC--CC--C-A-GCCCATCTTA-GAT
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           5645 24 -     12518 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              7110 23 +     51355 GG-AACTC--CT--C-AC--CCACCTTA-GAT
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                 232 23 -     36483 CG-AACTC--CT--C-AC--CCACCTTA-GAT
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_743489                               3298 23 -     45847 GG-AACTC--CT--C-AC--CCACCTTA-GAT
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                24508 23 +     25266 GG-AGCTC--CT--C-AC--CCACCTTA-GAT
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_918386                             233 23 -      9457 GG-AGCTC--CT--C-AC--CCACCTTA-GAT
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_3472759                            17804 23 -     18578 GG-AGCTC--CT--C-AC--CCACCTTA-GAT
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              3203 23 +     47717 AG-AGCTC--CT--C-AC--CCACCTTA-GAT
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             3303 23 -      3544 GG-AGCTG--CT--C-AC--CCACCTTA-GAT
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             14527 23 +     50774 GG-AGCTC--CT--C-AC--CCACCTTA-GAT
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184747 24 +    412891 GA-AACTC--TT--T-A-ACCCACAGTG-AAT
i Anoura_caudifer.AnoCau_scaffold_1412                   I 1 C 0
s Aotus_azarae.k141_3104676                                  15147 22 -     33861 GG-AGCTC--CT--C-A---GCACCTTA-CAT
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            15167 22 -     34016 GG-AGCTC--CT--C-A---GCACCTTA-CAT
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297564 22 -   5030052 GG-AGCTC--CT--C-A---GCACCTTA-CAT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             15169 22 -     34685 GG-AGCTC--CT--C-A---GCACCTTA-CAT
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28293 22 -     47192 GG-AGCTC--CT--C-A---GCACCTTA-CAT
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      12350 22 +     20879 AG-AAC-C--TC--C-A-ATCCACAGTA-AA-
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 1 I 26
s Arctocebus_calabarensis.k141_2318572                       11304 23 +     14667 GG-AAATC--TC--T-G-ATCTGCAGTA--AT
i Arctocebus_calabarensis.k141_2318572                   C 0 I 14
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4154 24 +     43469 GA-AAGTC--TT--T-A-ACCCACCGTG-ACT
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 1 C 0
s Avahi_laniger.k141_765380                                  53461 24 -     92717 AG-GAATC--TC--A-G-ACCCACAGTA-ACT
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54088 24 +     85213 AG-GAATC--TC--A-G-ACCCACAGTA-ACT
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             4902 22 -     10423 GG-AGCTC--CT--C-A---CCACCTTA-CAT
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             24374 22 +     31915 GG-AGCTC--CT--C-A---CCACCTTA-CAT
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            4868 22 +      5267 GG-AGCTC--CT--C-A---CCACCTTA-CAT
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590082 22 - 189096842 GG-AGCTC--CT--C-A---CCACCTTA-CAT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             11613 22 -     12001 GG-AGCTC--CT--C-A---CCACCTTA-CAT
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002048 24 -  17673402 GA-AACTC--TC--C-A-ACGCAGAGTA-AGT
i Camelus_bactrianus.KN276810.1                          I 1 C 0
s Camelus_dromedarius.KN272107.1                           2334506 24 -   7040546 GA-AACTC--CC--C-A-ACGCAGAGTA-AGT
i Camelus_dromedarius.KN272107.1                         I 1 C 0
s Camelus_ferus.KB017975.1                                  402789 24 -   1652518 GA-AACTC--CC--C-A-ACGCAGAGTA-AGT
i Camelus_ferus.KB017975.1                               I 1 C 0
s CanFam4.chr16                                           17798857 24 -  60362399 GA-AACTC--TC--C-A-ACCCAAAATG-AAT
i CanFam4.chr16                                          I 1 I 12
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184914 24 -    185531 GA-AACTC--TC--C-A-ACCCAAAATG-AAT
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 1 I 12
s Canis_lupus_dingo.QKWQ01000480.1                         9034300 24 -   9314153 GA-AACTC--TC--C-A-ACCCAAAATG-AAT
i Canis_lupus_dingo.QKWQ01000480.1                       I 1 I 12
s Canis_lupus_familiaris.chr16                            17958565 24 -  59632846 GA-AACTC--TC--C-A-ACCCAAAATG-AAT
i Canis_lupus_familiaris.chr16                           I 1 I 12
s Canis_lupus_orion.HG994398.1                            18500077 24 +  63665305 GA-AACTC--TC--C-A-ACCCAAAATG-AAT
i Canis_lupus_orion.HG994398.1                           I 1 I 12
s Carlito_syrichta.NW_007247396.1                           201101 23 +    308752 AG-GACTC--TC--C-A-ACCCACG-TA-AAT
i Carlito_syrichta.NW_007247396.1                        I 1 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                4517 24 -     11696 GA-AATTC--TT--T-A-ACCCACAGTG-ACT
i Carollia_perspicillata.CarPer_scaffold_92756           I 1 C 0
s Castor_canadensis.CasCan_scaffold_2074                    136847 24 +    179628 GG-AGCTC--TC--C-A-ACATACAGTA-AAT
i Castor_canadensis.CasCan_scaffold_2074                 I 1 I 25
s Catagonus_wagneri.CatWag_scaffold_2839                     92678 25 +    217609 AA-GACTC--CC--C-AAACCCAGAGTA-AAT
i Catagonus_wagneri.CatWag_scaffold_2839                 I 1 C 0
s Cavia_aperea.AVPZ01000300.1                             18348165 24 -  23392119 CT-TGCCC--TA--C-A-GAATAAATTA-Aac
i Cavia_aperea.AVPZ01000300.1                            I 1 I 2632
s Cavia_porcellus.DS562891.1                              18360425 24 -  23407841 CT-TGCCC--TA--C-A-GAATAAATTA-Aac
i Cavia_porcellus.DS562891.1                             I 1 I 2635
s Cavia_tschudii.CavTsc_scaffold_8919                        99299 24 +    143979 CT-TGCCC--TA--C-A-GAATAAATTA-AAc
i Cavia_tschudii.CavTsc_scaffold_8919                    I 1 I 2643
s Cebuella_niveiventris.k141_1251222                          9527 22 -     11392 GG-AGCTC--CT--C-A---CCACCTTA-CAT
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               5625 22 -      7577 GG-AGCTC--CT--C-A---CCACCTTA-CAT
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25651655 22 +  26074798 GG-AGCTC--CT--C-A---CCACCTTA-CAT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_398305                                 1231 22 +      1777 GG-AGCTC--CT--C-A---CCACCTTA-CAT
i Cebus_olivaceus.k141_398305                            C 0 C 0
s Cebus_unicolor.k141_544048                                 49568 22 -     74725 GG-AGCTC--CT--C-A---CCACCTTA-CAT
i Cebus_unicolor.k141_544048                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         5107 23 +     31688 AG-GACTC--TC--C-A-ACCCACG-TA-AAT
i Cephalopachus_bancanus.k141_1423433                    I 1 C 0
s Ceratotherium_simum.JH767749.1                          12231105 24 +  27778364 GG-AACTC--TC--C-A-ACCCACAGTA-AAT
i Ceratotherium_simum.JH767749.1                         I 1 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2132 24 -     25243 GG-AACTC--TC--C-A-ACCCACAGTA-AAT
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 1 C 0
s Cercocebus_atys.KQ010504.1                               4475305 24 +   4669795 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        13850 24 -     19203 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3342297                            466 24 -     14043 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           8502 24 +     27781 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         8667 24 -     20310 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          11646 24 +     29689 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            6400 24 -     20078 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          14325 24 -     27936 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            3190 24 -     17152 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38816726 24 +  39242232 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222420 24 -  21565898 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       39538 24 -     53127 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        6805 24 +      7159 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14337 24 -     27947 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         14314 24 +     17596 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                           359 24 +     14005 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             221 15 -      8501 --------------T-G-ACCCCCAGAA-AAT
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             20840 24 -     52598 AG-GAATC--TC--A-G-ACCCACAGTA-ACT
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16205 24 +     57038 AG-GAATC--TC--A-G-ACCCACAGTA-ACT
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1251506 24 +   2543920 CT-TGATT--TT--C-A-GAATAAATTA-GAc
i Chinchilla_lanigera.JH722012.1                         I 1 I 1066
s Chiropotes_albinasus.k141_2813271                          10779 22 +     11226 GG-AGCTT--CT--C-A---CCACCTCA-CAT
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18428296 24 -  18827391 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       14733 24 -     50209 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135421733 24 + 135778131 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 17999 24 +     19366 AG-AAAGC--TC--T-G-ACCCACAGCA-AAT
i Choloepus_didactylus.ChoDid_scaffold_45914             I 1 I 18
s Choloepus_hoffmanni.KN194906.1                            173074 24 +    839153 AG-AAAGC--TC--T-G-ACCCACAGCA-AAT
i Choloepus_hoffmanni.KN194906.1                         I 1 I 18
s Colobus_angolensis.KN981557.1                            1910238 24 +   2368649 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_polykomos.k141_906115                              36776 24 +     84244 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17547775 21 -  53390261 GA---CGC--TC--C-A-CTCCAGTGTG--AT
i Condylura_cristata.JH655891.1                          I 1 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14094 24 -     20389 GA-AACTC--TC--C-A-GCCCACAGTG-AAT
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 1 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 49861 22 +     63868 G--AA-AC--TG--A-A-ATACAAGGTA-AAT
i Cricetomys_gambianus.CriGam_scaffold_18520             I 1 I 23
s Cricetulus_griseus.LT883664.1                           11667355 22 + 224834208 G--GA-AC--AG--C-A-ATGCACAGTA-GAT
i Cricetulus_griseus.LT883664.1                          I 1 I 23
s Crocidura_indochinensis.CroInd_scaffold_37019               2668 18 -     19598 GATAATTC--TC--C-A-ACTCAT--------
i Crocidura_indochinensis.CroInd_scaffold_37019          I 1 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28165 24 -     87169 GA-AACAC--TC--C-A-ACCCTATGTA-AAT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 1 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    836855 24 +   1526836 AT-TACTC--TC--C-A-GTACATAGTA-AAC
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 1 I 19
s Cuniculus_paca.CunPac_flattened_line_231100                 3577 24 +      5455 CT-TGTTC--TG--C-A-GAATAAATTa-aac
i Cuniculus_paca.CunPac_flattened_line_231100            I 1 I 1095
s Dasyprocta_punctata.DasPun_flattened_line_206793            1931 24 +      3576 CT-TGTTC--TG--C-A-GAATATATTA-AAC
i Dasyprocta_punctata.DasPun_flattened_line_206793       I 1 N 0
s Dasypus_novemcinctus.JH564415.1                            63224 24 +   2246927 GG-AAATC--TC--T-G-ACCCACAGAA-AAT
i Dasypus_novemcinctus.JH564415.1                        I 1 C 0
s Daubentonia_madagascariensis.ctg71                      12537069 24 -  12879189 AG-GACTC--TC--C-C-ATCCACAGTG-AAT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8629531 24 +  20541912 GC-AACTC--TT--T-A-ACCCACAGTG-AAT
i Desmodus_rotundus.KZ672289.1                           I 1 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672956 24 +   1390856 GG-AACTC--TC--C-A-Acccatagta-aat
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 1 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    5708 24 +    198055 GG-AACTC--TC--C-A-ACCCACAGTA-AAT
i Diceros_bicornis.DicBicMic_scaffold_5955               I 1 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    35092 24 +     67921 CT-TGGTC--TG--C-A-GAATAAATTA-GAC
i Dinomys_branickii.DinBra_scaffold_21862                I 1 I 1073
s Dolichotis_patagonum.DolPat_scaffold_30833                 32183 24 -     42551 CT-TGCCC--TG--C-A-GAATAAACTA-AAC
i Dolichotis_patagonum.DolPat_scaffold_30833             I 1 I 2668
s Echinops_telfairi.JH980293.1                            48780102 14 + 111700974 ----------------A-AAATATAGTG-AAC
i Echinops_telfairi.JH980293.1                           I 8 C 0
s Eidolon_helvum.KE759718.1                                  10202 24 +     11740 GA-AACTC--TC--C-A-TCCCGCAGTA-AAT
i Eidolon_helvum.KE759718.1                              I 1 C 0
s Elephantulus_edwardii.JH947257.1                         1097396 24 +  10337057 GA-AACTC--TC--C-A-ACCTATGCTA-CAC
i Elephantulus_edwardii.JH947257.1                       I 1 C 0
s Ellobius_lutescens.LOEQ01008920.1                          20102 10 -    110024 ---------------------CACAGTA-AAT
i Ellobius_lutescens.LOEQ01008920.1                      I 8 I 21
s Ellobius_talpinus.LOJH01081419.1                             233 10 +      8657 ---------------------CACAGTA-AAT
i Ellobius_talpinus.LOJH01081419.1                       I 8 I 21
s Enhydra_lutris.KZ291758.1                               16328999 25 -  41312741 GA-AACTC--TC--CAA-ATCCAAAGTG-AAT
i Enhydra_lutris.KZ291758.1                              I 1 C 0
s Eptesicus_fuscus.JH977646.1                              2145411 24 -  14770903 NN-NNNNN--NN--N-N-NNNNNNNNNN-NNN
i Eptesicus_fuscus.JH977646.1                            I 297 C 0
s Equus_asinus.JREZ01000139.1                              1283226 26 +   4378816 GG-AACTC--CTGTA-A-ACCCACAGTG-AAT
i Equus_asinus.JREZ01000139.1                            I 1 C 0
s Equus_caballus.CM000403.2                               18531046 26 -  39960074 GG-AACTC--CTGTA-A-ACCCACAGTG-AAT
i Equus_caballus.CM000403.2                              I 1 C 0
s Equus_przewalskii.KK951119.1                               33075 26 +    498745 GG-AACTC--CTGTA-A-ACCCACAGTG-AAT
i Equus_przewalskii.KK951119.1                           I 1 C 0
s Erinaceus_europaeus.JH835339.1                           3328003 21 -   7059049 GA-AATTCAGCc--c-a-ccccaaaa------
i Erinaceus_europaeus.JH835339.1                         I 1 C 0
s Erythrocebus_patas.Contig38                             21204903 24 -  21539334 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13565 24 -     14127 GG-GAATC--TC--A-G-ATCCACGGTA-ACT
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6266 24 -     16928 GG-GAATC--TC--A-G-ATCCACGGTA-ACT
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15292 24 -     25546 GG-GAATC--TC--A-G-ATCCACAGTA-ACT
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12496 24 +     26330 GG-GAATC--TC--A-G-ATCCATGGTA-ACT
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 13729 24 +     23973 GG-GAATC--TC--A-G-ATCCACGGTA-ACT
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12493 24 +     75513 GG-GAATC--TC--A-G-ATCCACGGTA-ACT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10424 24 +     97555 GG-GAATC--TC--A-G-ATCCACGGTA-ACT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            13355 24 +     26496 GG-GAACC--TC--A-G-ATCCACGGTA-ACT
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  3965 24 -     17153 GG-GAATC--TC--A-G-ATCCACGGTA-ACT
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13540 24 +    111500 GG-GAATC--TC--A-G-ATCCTCGGTA-ACT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20236653 24 + 206538554 GA-AACTC--TG--C-A-ACCCAGAGTA-AAT
i Felis_catus.CM001381.2                                 I 1 C 0
s Felis_catus_fca126.CM031415.1                           20195496 24 + 205367284 GA-AACTC--TG--C-A-ACCCAGAGTA-AAT
i Felis_catus_fca126.CM031415.1                          I 1 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  9010 24 -     36744 GA-AACTC--TG--C-A-ACCCAGAGTA-AAT
i Felis_nigripes.FelNig_flattened_line_20823             I 1 C 0
s Galago_moholi.ctg2040                                     426438 23 -    453645 GG-AAATG--TC--T-G-ATCCACAGTA--AT
i Galago_moholi.ctg2040                                  C 0 I 14
s Galago_senegalensis.k141_631886                             4129 23 +     11339 GG-AAATG--TC--T-G-ATCCACAGTA--AT
i Galago_senegalensis.k141_631886                        C 0 I 14
s Galagoides_demidoff.k141_1711393                            1443 23 +     41679 GG-AAATG--TC--T-G-ATCCACAGTA--AT
i Galagoides_demidoff.k141_1711393                       C 0 I 14
s Galeopterus_variegatus.GalVar_scaffold_108840                902 24 -      9135 GG-AACGC--TC--C-A-ACCCCCCAAA-AAT
i Galeopterus_variegatus.GalVar_scaffold_108840          I 1 C 0
s Gorilla_beringei.k141_3596273                              15683 24 -     32273 GG-ATCTC--CC--T-A-GCCCACCTTA-GAT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186337829 24 + 186649187 GG-ATCTC--CC--T-A-GCCCACCTTA-GAT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6619  8 -     19426 -----------------------CAGTA-ACT
i Hapalemur_alaotrensis.k141_170648                      I 8 C 0
s Hapalemur_gilberti.k141_488810                             11768  8 -     15286 -----------------------CAGTA-ACT
i Hapalemur_gilberti.k141_488810                         I 8 C 0
s Hapalemur_griseus.k141_1511508                             13407  8 +     18253 -----------------------CAGTA-ACT
i Hapalemur_griseus.k141_1511508                         I 8 C 0
s Hapalemur_meridionalis.k141_248335                         13508  8 -     41752 -----------------------CAGTA-ACT
i Hapalemur_meridionalis.k141_248335                     I 8 C 0
s Hapalemur_occidentalis.k141_907772                         13345  8 -     16460 -----------------------CAGTA-ACT
i Hapalemur_occidentalis.k141_907772                     I 8 C 0
s Helogale_parvula.HelPar_flattened_line_2585               241999 24 +    327341 GA-AACTC--TC--C-A-ATCCATGGTA-AAT
i Helogale_parvula.HelPar_flattened_line_2585            I 1 C 0
s Heterocephalus_glaber.JH602082.1                        20660059 24 +  22651954 TG-TGCTC--TG--C-A-Gaataaattt-gac
i Heterocephalus_glaber.JH602082.1                       I 1 I 1939
s Heterohyrax_brucei.HetBruBak_scaffold_122365                 570 24 +      7595 CT-AAATT--GC--C-A-ACCCACAGGG-CAC
i Heterohyrax_brucei.HetBruBak_scaffold_122365           I 1 C 0
s Hoolock_leuconedys.ctg274                                    434495 24 +    630532 GG-ATCTT--TC--C-A-GCTCACCTTA-GAT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  44693 24 +     55795 GA-AACTC--TC--C-A-ACCCAAGGTA-AAT
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 1 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20555 24 -    143317 CT-TGCCC--TG--C-A-GAATAAATTA-CAC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 1 I 2631
s Hylobates_agilis.k141_232023                                2261 24 -     12752 GG-ATCTC--TC--T-A-GCCCACCTTA-GAT
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                               2305 24 +     14092 GG-ATCTC--TT--T-A-GCCCACCTTA-GAT
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189543088 24 - 191637585 GG-ATCTC--TC--C-A-GCCCACCTTA-GAT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3335983 24 -  11177569 GG-ATCTC--TC--C-A-GCCCACCTTA-GAT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      81634 24 +    135385 CT-TGTTC--TG--C-A-GAATAAATTT-GAC
i Hystrix_cristata.HysCri_scaffold_5660                  I 1 I 1077
s Ictidomys_tridecemlineatus.JH393364.1                    7520653 22 -   7955117 GG-AACCC--TC--C-T--CCAATGGTA-AA-
i Ictidomys_tridecemlineatus.JH393364.1                  I 1 I 1
s Indri_indri.k141_3655594                                   22282 24 +     31101 AG-GAATC--TC--A-G-ACCCACAGTA-ACT
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8276606 23 -   9596543 G--GATCT--CT--T-A-GCCCACAGTA-AAC
i Jaculus_jaculus.JH725527.1                             I 8 I 21
s Lasiurus_borealis.LasBor_scaffold_50988                    16064 24 -     29960 GA-AACTC--TC--C-A-ACCCATAGGA-CAT
i Lasiurus_borealis.LasBor_scaffold_50988                n 301 I 305
s Lemur_catta.scaffold_24                                 15523844 24 -  30322482 GG-GAATC--TC--A-G-ATCCACAGTA-ACT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7164 22 +     64341 GG-AGCTT--CT--C-A---CCACCTTA-CAT
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           4487 22 +      4941 GG-AGCTT--CT--C-A---CCACCTTA-CAT
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        7205 22 +     35603 GG-AGCTT--CT--C-A---CCACCTTA-CAT
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    28677 22 +     38576 GG-AGCTC--CT--C-A---CCACCCTA-CAT
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         25374 22 +     66356 GG-AGCTC--CT--C-A---CCACCCTA-CAT
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         10742 24 -     23766 AG-GAGTC--TC--A-G-ACCCACAGTA-ACT
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             28803 24 +     45836 AG-GAGTC--TC--A-G-ACCCACAGTA-ACT
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1339 24 +     25010 AG-GAGTC--TC--A-G-ACCCACAGTA-ACT
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      26739 24 +     54090 AG-GAGTC--TC--A-G-ACCCACAGTA-ACT
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3042522 25 +   3914936 GA-AACTC--TC--CAA-ATCCAAAGTG-AAC
i Leptonychotes_weddellii.KB714746.1                     I 1 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6189 24 -     14121 AG-AGCTC--TG--C-A-ACTCACAGGA-AAT
i Lepus_americanus.LepAme_scaffold_107385                I 1 C 0
s Lophocebus_aterrimus.ctg367                              1436852 24 +   1826925 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5686 23 +     11245 GG-AAATC--TC--T-G-ATCCGCAGTA--AT
i Loris_lydekkerianus.k141_2539221                       C 0 I 14
s Loris_tardigradus.ctg83                                  1004506 23 +   6120653 GG-AAATC--TC--T-G-ATCCGCAGTA--AT
i Loris_tardigradus.ctg83                                C 0 I 14
s Loxodonta_africana.GL010049.1                            4216998 24 -  43346337 GG-AAATG--TC--C-A-ACTCACAGTA-CAC
i Loxodonta_africana.GL010049.1                          I 7 C 0
s Lycaon_pictus.CM007581.1                                17954805 24 -  59628241 GA-AACTC--TC--C-A-ACCCAAAATG-AAT
i Lycaon_pictus.CM007581.1                               I 1 I 12
s Macaca_arctoides.k141_2326796                               6662 24 +     40492 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59675921 24 +  60120075 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 12434 24 -     26193 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            80218 24 -    114318 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  5909 24 -     23192 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                15378 24 -     29190 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  23943 24 +     37952 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186839032 24 + 187317192 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25457595 24 -  25927173 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  79791 24 +     89720 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 6792 24 +     20474 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   6592 24 -     14993 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  329458 24 -    668171 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 4908 24 -     24072 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               25530 24 -     45290 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90299 24 +     94391 GA-AACTC--CC--T-A-ATCCGCAGTA-AAT
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 1 C 0
s Mandrillus_leucophaeus.scaffold280                      23937125 24 -  24302211 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               351253 24 +    752769 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33102844 12 -  40650429 ----------------T--CCAATGGTA-AA-
i Marmota_marmota.CZRN01000018.1                         I 8 I 1
s Megaderma_lyra.MegLyr_scaffold_4542                        10008 24 -    207569 GA-AAGTC--TT--C-A-ACGCACAGTA-AAT
i Megaderma_lyra.MegLyr_scaffold_4542                    I 1 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              9713 25 +     13704 GA-AACTC--TC--CAA-ATCCAAAATG-AAT
i Mellivora_capensis.MelCap_flattened_line_69365         I 1 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 32536 22 +    140813 G--GA-AC--AT--C-A-ACACACAGCA-AAT
i Meriones_unguiculatus.MerUng_scaffold_7390             I 1 I 23
s Mesocricetus_auratus.KB708134.1                         12182033 22 -  29670104 G--GA-AT--AG--C-A-ATGCACAGTA-AAT
i Mesocricetus_auratus.KB708134.1                        I 1 I 23
s Mico_argentatus.k141_1239457                                5442 22 -      7380 GG-AGCTC--CT--C-A---CCACCTTA-CAT
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               4515 22 +     18990 GG-AGCTC--CT--C-A---CCACCTTA-CAT
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      5454 22 -      7356 GG-AGCTC--CT--C-A---CCACCTTA-CAT
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18291264 24 -  93316391 GG-GAATC--TC--A-G-ACCCACAGTA-ACT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    21832 23 -    145209 GG-AAGTC--TC--C-A-AAATATAGT--CAC
i Microgale_talazaci.MicTal_scaffold_6613                I 1 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                15072 24 -     19307 GA-AACTG--TT--T-A-GCCCGCAGTG-AAT
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 1 I 23
s Miniopterus_natalensis.LDJU01000034.1                    1850318 13 +   8254450 ------------------CCCCACAGTA-AAT
i Miniopterus_natalensis.LDJU01000034.1                  I 11 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             33995 13 +     64694 ------------------CCCCACAGTA-AAT
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 11 C 0
s Miopithecus_ogouensis.k141_534055                           8860 14 -     28506 ----------------A-GCCCACCTTA-GAT
i Miopithecus_ogouensis.k141_534055                      I 9 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         5390 25 -      8324 GA-AACTC--TC--CAA-ATCCAAAGTG-AAC
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 1 C 0
s Mirza_zaza.k141_952172                                      8809 24 -     37649 GG-GAATC--TC--A-G-ATCCACAGTA-ACT
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141014 24 -    366855 GA-AACTC--TT--T-G-ACCTACAGTA-AAT
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 1 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35098 24 +     37127 GA-AACTC--TC--C-A-ATCCATGGTA-AAT
i Mungos_mungo.MunMun_flattened_line_23663               I 1 C 0
s Murina_feae.MurFea_scaffold_85699                           6488 24 +     14753 ga-aactc--tc--c-A-ACCCACAGTG-CAT
i Murina_feae.MurFea_scaffold_85699                      I 321 C 0
s Mus_caroli.LT608237.1                                   84361153 22 - 120012414 G--AA-AC--AG--C-C-ATACACAGTA-AGT
i Mus_caroli.LT608237.1                                  I 1 I 22
s Mus_musculus.chr8                                       87650151 22 - 129401213 G--AA-AC--AG--C-C-ATACACAGTA-AGT
i Mus_musculus.chr8                                      I 1 I 22
s Mus_pahari.LT608297.1                                   31354807 22 -  89631738 G--AA-AC--AG--C-C-ATACACAGTA-AGT
i Mus_pahari.LT608297.1                                  I 1 I 22
s Mus_spretus.CM004101.1                                  90752212 22 - 130317789 G--AA-AC--AG--C-C-ATACACAGTA-AGT
i Mus_spretus.CM004101.1                                 I 1 I 22
s Mustela_putorius.JH418006.1                               300897 25 -  14710649 GA-AAATC--TC--CAA-ATCCAAAGTG-AAT
i Mustela_putorius.JH418006.1                            I 1 C 0
s Myotis_brandtii.KE162005.1                                280133 24 -  10118263 aa-aactg--TC--C-A-ACCCACAGTG-CAT
i Myotis_brandtii.KE162005.1                             I 783 C 0
s Myotis_davidii.KB100139.1                                1587401 24 -   6019432 gg-aactc--TC--C-A-ACCCACAGTG-CAT
i Myotis_davidii.KB100139.1                              I 358 C 0
s Myotis_lucifugus.GL429869.1                              3903487 24 -   4330536 aa-aactg--CC--C-A-ACCCACAGTG-CAT
i Myotis_lucifugus.GL429869.1                            I 372 C 0
s Myotis_myotis.MyoMyo_scaffold_482318                         161 24 -       721 gg-aactc--tc--c-t-acccACAGTG-CAT
i Myotis_myotis.MyoMyo_scaffold_482318                   N 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              188933 24 +    196477 GG-AAAGC--TC--T-G-ACCCATAGCA-AAT
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 1 C 0
s Nannospalax_galili.KL204047.1                            2033854 23 -   3037898 G--AACAC--TG--C-A-ATGCACAGTA-AAT
i Nannospalax_galili.KL204047.1                          I 1 I 21
s Nasalis_larvatus.k141_413338                               14825 24 +     21681 AG-AGCTC--CA--C-A-ACCCACCTTA-GAT
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306644 25 +  31847680 GA-AACTC--TC--CAA-ATCCAAAGTG-AAC
i Neomonachus_schauinslandi.NINY01007730.1               I 1 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149059 24 -   9404916 GA-AACTC--TC--C-A-ACCCAAAATG-AAT
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 1 I 12
s Nycticebus_bengalensis.LG01                            102579478 23 - 196305487 GG-AAATC--TC--T-G-ATCCGCAGTA--AT
i Nycticebus_bengalensis.LG01                            C 0 I 14
s Nycticebus_coucang.k141_771082                              1323 23 -      2667 GG-AAATC--TC--T-G-ATCCGCAGTA--AT
i Nycticebus_coucang.k141_771082                         C 0 I 14
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749906 23 + 199412804 GG-AAATC--AC--T-G-ATCCTCAGTA--AT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 14
s Odobenus_rosmarus.KB229312.1                              506329 25 -   2017862 GA-AACTC--TC--CAA-ATCCAAAGTG-AAT
i Odobenus_rosmarus.KB229312.1                           I 1 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   24949 10 +     28053 ---------------------CACAGTA-AAT
i Ondatra_zibethicus.OndZib_scaffold_46174               I 8 I 21
s Onychomys_torridus.OnyTor_scaffold_2986                    79937 23 +    102263 G--TA-AC--TG--C-C-ATACACGGAAAAAT
i Onychomys_torridus.OnyTor_scaffold_2986                I 1 I 21
s Orycteropus_afer.OryAfe_flattened_line_144387               9517 24 -     18566 GG-AAATC--TC--C-A-ACCCATAGTA-TAT
i Orycteropus_afer.OryAfe_flattened_line_144387          I 1 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147072 24 + 174332312 AG-AGCTC--TG--C-A-ACCCACAGGA-AAT
i Oryctolagus_cuniculus.CM000791.1                       I 1 I 16
s Otocyon_megalotis.JAEUCK010005147.1                       462027 24 -    559221 GA-AACTC--TC--C-A-ACCCAAAATG-AAT
i Otocyon_megalotis.JAEUCK010005147.1                    I 1 I 12
s Otolemur_crassicaudatus.k141_222918                         3970 23 +      8798 GG-AAATG--TC--T-G-ATCCACAGTA--AT
i Otolemur_crassicaudatus.k141_222918                    C 0 I 14
s Otolemur_garnettii.GL873799.1                             696133 23 -   1103335 GG-AAATG--TC--T-G-ATCCACAGTA--AT
i Otolemur_garnettii.GL873799.1                          C 0 I 14
s Pan_paniscus.KQ411613.1                                    43776 24 +     80009 GG-ATCTC--CC--T-A-GCCCACCTTA-GAT
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189142684 24 + 189151597 GG-ATCTC--CC--T-A-GCCCACCTTA-GAT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  150855 24 +    230217 GA-AACTT--TG--C-A-ACCCAGAGTA-AAT
i Panthera_onca.PanOnc_flattened_line_3271               I 1 C 0
s Panthera_pardus.KV860321.1                                264061 24 +  18783137 GA-AACTT--TG--C-A-ACCCAGAGTA-AAT
i Panthera_pardus.KV860321.1                             I 1 C 0
s Panthera_tigris.KE722367.1                               4720940 24 -   8748460 GA-AACTT--TG--C-A-ACCCAGAGTA-AAT
i Panthera_tigris.KE722367.1                             I 1 C 0
s Papio_anubis.CM001495.2                                183442875 24 + 183742232 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             6573 24 +     20448 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563381 24 +  20919399 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   5317 24 +     41871 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     8602 24 +     27711 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  8683 24 +      9205 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12332 24 -     78924 GA-AACTC--TC--C-A-ACCCAAAGTA-AAT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 1 C 0
s Perodicticus_ibeanus.k141_855320                            9940 23 +     13100 GG-AAATC--TC--T-G-ATCTGCAGTA--AT
i Perodicticus_ibeanus.k141_855320                       C 0 I 14
s Perodicticus_potto.k141_1092580                             8346 23 +     25941 GG-AAATC--TC--T-G-ATCTGCAGTA--AT
i Perodicticus_potto.k141_1092580                        C 0 I 14
s Peromyscus_maniculatus.KI615324.1                       18194561 22 -  18517816 a--ga-ac--TG--C-A-ATACATGGTA-AAT
i Peromyscus_maniculatus.KI615324.1                      I 1 I 23
s Petromus_typicus.PetTyp_scaffold_42190                     26821 24 -     29689 CT-CGCTC--TA--C-A-GAATAAATAC-Acc
i Petromus_typicus.PetTyp_scaffold_42190                 I 1 I 1088
s Piliocolobus_badius.k141_1234363                           43336 24 +     62158 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        38067 24 +     89929 GG-AGCTC--CC--C-A-GCCTACCTTA-GAT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            39483 24 +     51399 GG-AGCTC--CC--C-A-GCCTACCTTA-GAT
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14295721 24 -  14605196 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189130818 24 + 189387572 GG-ATCTC--CC--C-A-GCCCACCTTA-GAT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570426 24 +   9816681 GG-ATCTC--CC--C-A-GCCCACCTTA-GAT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               73005 24 -     81375 GG-AGCTC--CG--C-A-ACCCACGTTA-GAT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              4825 24 +     19060 GG-AGCTC--CG--C-A-ACCCACGTTA-GAT
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 13025 24 -     22811 CT-AAATC--GC--C-A-ACCCACAGGG-CAC
i Procavia_capensis.ProCapCap_scaffold_85530             I 1 C 0
s Prolemur_simus.MPIZ01000396.1                            2596524 24 -   4620579 GG-GAATC--TC--A-G-ATCCACAGTA-ACT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990505 24 +   2598838 AG-GAATC--TC--A-G-ACCCACAGTA-ACT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          28817 24 +     38485 AG-GAATC--TC--A-G-ACCCACAGTA-ACT
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                               860 24 -     13098 AG-GAATC--TC--A-G-ACCCACAGTA-ACT
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26338 24 +     35766 AG-GAATC--TC--A-G-ACCCACAGTA-ACT
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4525 24 -     24134 AG-GAATC--TC--A-G-ACCCACAGTA-ACT
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28350 24 -     67325 AG-GAATC--TC--A-G-ACCCACAGTA-ACT
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4573 24 -      6182 AG-GAATC--TC--A-G-ACCCACAGTA-ACT
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            10175 22 -     21651 G--GA-AC--AT--C-A-ACACACAGTA-AAT
i Psammomys_obesus.NESX01036370.1                        I 1 I 21
s Pteronotus_parnellii.KE909381.1                            14364 15 -     21811 --------------T-A-ACCCACAGCG-AAT
i Pteronotus_parnellii.KE909381.1                        I 8 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39913 25 +     42204 GA-AACTC--TC--CAA-ATCCAAAGTG-AGT
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 1 C 0
s Pteropus_alecto.KB030862.1                              22976459 24 +  28871421 ga-aatta--cC--C-A-ACCCACAATA-AAT
i Pteropus_alecto.KB030862.1                             I 1 C 0
s Pteropus_vampyrus.KN525825.1                             1359545 24 +   4952924 ga-aatta--cC--C-A-ACCCACAATA-AAT
i Pteropus_vampyrus.KN525825.1                           I 1 C 0
s Puma_concolor.QAVW01001104.1                            20274009 24 -  38429054 GA-AACTC--TG--C-A-ACCCAGAGTA-AAT
i Puma_concolor.QAVW01001104.1                           I 1 C 0
s Pygathrix_cinerea.k141_1153803                             14834 24 -     91421 GG-AACTC--CG--C-A-ACCCACCTTA-GAT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7608954 24 +   7812017 GG-AGCTC--CG--C-A-ACCCACCTTA-GAT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             14806 24 -     72585 GG-AGCTC--CG--C-A-ACCCACCTTA-GAT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53570416 22 +  90668790 G--GA-AC--AG--A-C-ATACACAGTG-AAT
i Rattus_norvegicus.chr16                                I 1 I 22
s Rhinopithecus_bieti.k119_217274                             6521 23 -     11128 GG-AGCTC--CG--C-A-GCC-GCCTTA-GAT
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91235876 23 - 195417433 GG-AGCTC--CG--C-A-ACC-GCCTTA-GAT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7671526 23 +   7961872 GG-AGCTC--CG--C-A-GCC-GCCTTA-GAT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87480 24 -     96226 GA-AACTC--CC--C-A-ACCCACAGTA-AAT
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 1 C 0
s Saguinus_bicolor.k141_2619299                               7841 22 -      8359 GG-AGCTT--CT--C-A---CCACCTCA-CAT
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_imperator.k141_2524406                             1800 22 +      2197 GG-AGCTT--CT--C-A---CCACCTTA-CAT
i Saguinus_imperator.k141_2524406                        C 0 C 0
s Saguinus_inustus.k141_699149                               13219 22 +     13640 GG-AGCTT--CT--C-A---CCACCTTA-CAT
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               8088 22 +      8564 GG-AGCTT--CT--C-A---CCACCTTA-CAT
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209468937 22 + 209938924 GG-AGCTT--CT--C-A---CCACCTTA-CAT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 7646 22 -      9399 GG-AGCTT--CT--C-A---CCACCTCA-CAT
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119950557 20 - 121099817 GG---CTC--CT--C-G---CCACCTTA-CGT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23013 20 +     46362 GG---CTC--CT--C-G---CCACCTTA-CGT
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               23108 20 +     45824 GG---CTC--CT--C-G---CCACCTTA-CGT
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             39736 20 -     64574 GG---CTC--CT--C-G---CCACCTTA-CGT
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               2742 20 -     23631 GG---CTC--CT--C-G---CCACCTTA-CGT
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 23004 20 -     61129 GG---CTC--CT--C-G---CCACCTTA-TGT
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420326 22 -   5703754 GG-AGCTC--CT--C-A---CCACCTTA-CAT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          55367 22 -     80660 GG-AGCTC--CT--C-A---CCACCTTA-CAT
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    152848 23 -    313613 GA-AACTC--TC--C-A-CCCCACAGTG--AT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 1 C 0
s Semnopithecus_entellus.k141_11662                          19345 24 -     19888 GG-AGCTC--CA--C-A-ACCCACCTTA-GAT
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26548 24 +     39453 GG-AGCTC--CA--C-A-ACCCACCTTA-GAT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            7067 24 +     27826 GG-AGCTC--CA--C-A-ACCCACCTTA-GAT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             6588 24 -     19483 GG-AGCTC--CA--C-A-ACCCACCTTA-GAT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      6656 24 +      7198 GG-AGCTC--CA--C-A-ACCCACCTTA-GAT
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         14914 24 +     15514 GG-AGCTC--CA--C-A-ACCCACCTTA-GAT
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11672 22 -     12148 A--GA-AC--TG--A-A-ATACATCATA-AAT
i Sigmodon_hispidus.SigHis_scaffold_60841                I 1 I 23
s Solenodon_paradoxus.SolPar_flattened_line_126               3473 23 +   1910179 GA-AACTC--CC--C-A-AGTCATAGGC--AC
i Solenodon_paradoxus.SolPar_flattened_line_126          I 1 C 0
s Sorex_araneus.JH798187.1                                13650716 18 -  18376816 GATAATTC--TT--C-A-ACTCAA--------
i Sorex_araneus.JH798187.1                               I 1 C 0
s Spermophilus_dauricus.KZ294078.1                         1953714 12 -   3870691 ----------------T--CCAATGGTA-AA-
i Spermophilus_dauricus.KZ294078.1                       I 8 I 1
s Spilogale_gracilis.SpiGra_flattened_line_13525             30418 25 +     97271 GA-AACTC--TC--CAA-ACCCAAAGTG-AAC
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 1 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              17999 24 -    196729 GA-AACTC--TC--C-A-ACCCATGGTA-AAT
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 C 0
s Sus_scrofa.CM000828.4                                    6810173 24 +  69701581 GA-GACTC--CC--C-A-Acccatagta-aat
i Sus_scrofa.CM000828.4                                  I 1 C 0
s Symphalangus_syndactylus.tarseq_199                      1093130 24 -   1523678 GG-ATCTC--TC--C-A-GCCCACCTTA-GAT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                10170 24 +     41958 GA-AACTC--TC--C-G-ACACACAGTA-AAT
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 1 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72288 24 +    116680 GG-AAAGC--TC--T-G-ACCCATAGCA-AAT
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 1 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118428 26 -    156842 GG-AACTC--CTGTA-A-ACCCACAGTC-AAT
i Tapirus_indicus.TapInd_scaffold_9301                   I 1 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    386885 26 +    539355 GG-AACTC--CTGTA-A-ACCCACAGTC-AAT
i Tapirus_terrestris.TapTer_scaffold_755                 I 1 C 0
s Tarsius_lariang.k141_2201908                               26109 23 +     70052 GG-AACTC--TC--C-A-ACCCACA-TA-AAC
i Tarsius_lariang.k141_2201908                           I 1 C 0
s Tarsius_wallacei.k141_254427                                 942 23 -     16117 GG-AACTC--TC--C-A-ACCCACA-TA-AAC
i Tarsius_wallacei.k141_254427                           I 1 C 0
s Theropithecus_gelada.CM009954.1                        186428245 24 + 186847797 GG-AGCTC--CC--C-A-GCCCACCTTA-GAT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              103945  8 +    114563 ct-tgctt--t---------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 1 I 1282
s Tolypeutes_matacus.TolMat_scaffold_228639                   6113 24 +      8208 GG-AAATC--TC--T-G-ACCCACAGAA-AAT
i Tolypeutes_matacus.TolMat_scaffold_228639              I 1 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     80606 24 +    610378 GA-AGCTC--TT--T-A-ACCCACAGTG-AAT
i Tonatia_saurophila.TonSau_scaffold_294                 I 1 C 0
s Trachypithecus_auratus.k141_722599                         10639 24 -     20410 GG-AGCTC--CA--C-A-ACCCACCTTA-GAT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    14833 24 +     15221 GG-AGCTC--CA--C-A-ACCCACCTTA-GAT
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                       10740 24 +     19930 GG-AGCTC--CA--C-A-ACCCACCTTA-GAT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       7167 24 -     19997 GG-AGCTC--CA--C-A-ACCCACCTTA-GAT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            47291 24 -     60166 GG-AGCTC--CA--C-A-ACCCACCTTA-GAT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        14762 24 -     27529 GG-AGCTC--CA--C-A-ACCCACCTTA-GAT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     14706 24 -     18194 GG-AGCTC--CA--C-A-ACCCACCTTA-GAT
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           8434 24 -     21137 GG-AGCTC--CA--C-A-ACCCACCTTA-GAT
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    7137 24 -     10723 GG-AGCTC--CA--C-A-ACCCACCTTA-GAT
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         6293 24 +      9834 GG-AGCTC--CA--C-A-ACCCACCTTA-GAT
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        24606 24 +     32220 GG-AGCTC--CA--C-A-ACCCACCTTA-GAT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5938708 24 +   6242583 GG-AGCTC--CA--C-A-ACCCACCTTA-GAT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        7960 24 +     20839 GG-AGCTC--CA--C-A-ACCCACCTTA-GAT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4292940 24 +  10818551 GG-AGATC--TC--C-A-ACCCGCCGTG-CGT
i Trichechus_manatus.JH594705.1                          I 1 I 23
s Tupaia_chinensis.KB320699.1                              2155373 24 +   4065304 AG-AACTC--TC--C-A-GTCTACAGTT-ACC
i Tupaia_chinensis.KB320699.1                            I 1 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9024 24 -     10553 AG-AACTC--TC--C-A-GTCCATGGTT-ACC
i Tupaia_tana.TupTan_flattened_line_97126                I 1 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   53005 23 -     77625 GA-ACCTC--TC--C-A-CCCCACAGTG--AT
i Uropsilus_gracilis.UroGra_scaffold_12083               I 1 C 0
s Ursus_maritimus.KK499267.1                               4850118 25 -   5085361 GA-AACCC--TC--CAA-ATCCAAAGTG-AAT
i Ursus_maritimus.KK499267.1                             I 1 C 0
s Varecia_rubra.k141_590885                                  11184 24 +     50397 GG-GAATC--TC--A-G-GTGCACAGTA-ACT
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11243 24 +     24756 GG-GAATC--TC--A-G-GTGCACAGTA-ACT
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371551 24 -   5488506 GA-AACTC--CC--C-A-ATGCAGAGTA-AGT
i Vicugna_pacos.KN270157.1                               I 1 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10472 24 -     43706 GA-AATTC--TC--C-A-ACCCAAAATG-AAT
i Vulpes_lagopus.VulLag_flattened_line_30954             I 1 I 12
s Xerus_inauris.XerIna_scaffold_2302                           832 23 +    224448 GG-AACAC--TC--C-A-ACCCACAGTA-AA-
i Xerus_inauris.XerIna_scaffold_2302                     I 1 I 1
s Zalophus_californianus.ZalCal_flattened_line_17732          5042 25 +     86975 GA-AACTC--TC--CAA-ATCCAAAGTG-AAT
i Zalophus_californianus.ZalCal_flattened_line_17732     I 1 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      14695 23 +     63895 G--GACTC--CA--C-A-GCACGCAGCA-AAT
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 8 I 24
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             1507 165 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746114 515 +  11899542 I
e Ochotona_princeps.JH802162.1                             1363382  0 +   3988456 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     70931 103 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11258714 1598 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50341  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352  0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             848639 531 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35445 102 +     51376 I
e Colobus_guereza.LG01                                   199948958  0 + 200372422 C
e Capromys_pilorides.CapPil_scaffold_65020                     744 103 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6452 62 +     62944 GATAAGTGAT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-CC-AA-A-A--------A----------------GCA----CA--GT--AAAC
s Acinonyx_jubatus.LLWD01001279.1                           827026 61 -   1699592 ATTCAGGGGT--CTTGG--C--C--AGAG------T-------T------T-------------C----T----AACA-TT-C----------------AACAGCACCT-CC-GA-A-A--------A----------------GCA----TT--GT--CACC
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     70644 40 +     87051 ---------------------------------------------------------------------T----AACA-TA-A----------------TGTAGTGTCT-TC-AG-A-A--------G----------------GCATCCATT--CT--CATC
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 23 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510282 61 -  29979442 GTTCAGTGGT--CTTGG--C--C--AAAG------TC------T--------------------C----T----AATA-TT-A----------------CACAGCAGCA-CC-AA-A-A--------A----------------TCA----TC--AT--CACC
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             79052 61 -    347723 ATTCAGTGGT--CTTGG--C--G--AAAG------TC------T--------------------C----T----AACA-TT-A----------------CACAGTACCT-CC-AA-A-A--------A----------------GCA----TC--AT--CACC
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     74351 33 -     89534 ---------------------------------------------------------------------------ATA-AT-A----------------CACAGCCCAC-AT-GT-A-A--------A----------------GTA----CA--TT---CTT
i Allactaga_bullata.AllBul_scaffold_9566                 I 7 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14384 61 -     52922 GTTAA-TGGT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         14320 61 -     28001 GTTAA-TGCT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          4816 61 -     18505 GTTAA-TGCT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           5669 62 -     12518 GTTAA-CGCT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TACAGCACCT-GC-AA-A-A--------A----------------GCA---GGG--GT--AAAC
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              7133 62 +     51355 GTCACGTGGT--CTTGT-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TAGAGCACCT-CCAAA-A-A--------A-----------------CA----CA--GT--AAAC
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                 255 62 -     36483 GTCACGTGGT--CTTGT-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TAGAGCACCT-CCAAA-A-A--------A-----------------CA----CA--GT--AAAC
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_743489                               3321 62 -     45847 GTCACGTGGT--CTTGT-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TAGAGCACCT-CCAAA-A-A--------A-----------------CA----CA--GT--AAAC
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                24531 62 +     25266 GTTACGTGGT--CTTGT-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TAGAGCACCT-CCAAA-A-A--------A-----------------CA----CA--CT--CAAC
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_918386                             256 62 -      9457 GTTACGTGGT--CTTGT-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TAGAGCACCT-CCAAA-A-A--------A-----------------CA----CA--GT--AAAC
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_3472759                            17827 62 -     18578 GTTACGTGGT--CTTGT-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TAGAGCACCT-CCAAA-A-A--------A-----------------CA----CA--GT--AAAC
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              3226 62 +     47717 GTTACGTGGT--CTTGT-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TAGAGCACCT-CCAAA-A-A--------A-----------------CA----CA--GT--AAAC
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             3326 62 -      3544 GTTACGTGGT--CTTGT-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------GAGAGCACCT-CCAAA-A-A--------A-----------------CA----CA--GT--AAAC
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             14550 62 +     50774 GTTACGTGGT--CTTGT-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TAGAGCACCT-CCAAA-A-A--------A-----------------CA----CA--CT--CAAC
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184771 63 +    412891 GCATAGTGAT--CTTGG--C--C--AGAG------TC------T--A---T-------------C----T----AACA-TT-A----------------CACGGAACCT-CC-AG-A-A--------A----------------GCA----TC--CT--CCTC
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  15169 61 -     33861 GTTACGTGGT--CTTGT-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TACGGCACCT-CC-AA-A-A--------A-----------------CA----CA--GT--AAAC
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            15189 61 -     34016 GTTACGTGGT--CTTGT-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATGGCACCT-CC-AA-A-A--------A-----------------CA----CA--GT--AAAC
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297586 61 -   5030052 GTTACGTGGT--CTTGT-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TACGGCACCT-CC-AA-A-A--------A-----------------CA----CA--GT--AAAC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             15191 61 -     34685 GTTACGTGGT--CTTGT-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TACGGCACCT-CC-AA-A-A--------A-----------------CA----CA--GT--AAAC
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28315 61 -     47192 GTTACGTGGT--CTTGT-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TACGGCACCT-CC-AA-A-A--------A-----------------CA----CA--GT--AAAC
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      12398 38 +     20879 -----------------------------------T----------------------------C----C----AAAA-CT-A----------------CATAGAACCT-CC-AG-A-A--------A----------------GCA----TA--AT--CAGC
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 26 C 0
s Arctocebus_calabarensis.k141_2318572                       11341 24 +     14667 -------------------------------------------------------------------------------------------------------ACACCT-GC-AG-G-A--------A----------------GCA----AA--GT--TGCC
i Arctocebus_calabarensis.k141_2318572                   I 14 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4178 62 +     43469 GCATAGTGGT--CTTGG--C--C--AGAG------TC------T--A---T-------------C----T----AACA-TT-A----------------CACAGAAC-T-CC-AG-A-A--------A----------------GCA----TT--AC--CCTC
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  53485 61 -     92717 GTGGAGTGGT--CTTGG-----CC-AGAGT----CT----------------------------C----T----AGCA-TT-A----------------CATAGCACCC-CC-AG-G-A--------A----------------GCA----TA--GT--CACC
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54112 61 +     85213 GTGGAGTGGT--CTTGG-----CC-AGAGT----CT----------------------------C----T----AGCA-TT-A----------------CATAGCACCC-CC-AG-G-A--------A----------------GCA----TA--GT--CACC
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             4924 61 -     10423 GCTACGGGGT--CTTGT-----CC-GAAGC----CT----------------------------C----T----GGCATTG-A----------------TACAGCACCT-CC-AG-A-A--------T-----------------CA----CA--GT--AAAC
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             24396 61 +     31915 GCTATGTGGT--CTTGT-----CC-TGAGG----CT----------------------------C----T----GGCATTG-A----------------TATAGCACCC-CC-AA-A-A--------T-----------------CA----CA--GT--AAAC
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            4890 61 +      5267 GCTACGTGGT--CTTGT-----CC-CAAGG----CT----------------------------C----T----GGCATTG-A----------------TACAGCACCT-CC-AG-A-A--------T-----------------CA----CA--GT--AAAC
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590104 61 - 189096842 GCTACGTGGT--CTTGT-----CC-CAAGG----CT----------------------------C----T----GGCATTG-A----------------TACAGCACCT-CC-AG-A-A--------T-----------------CA----CA--GT--AAAC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             11635 61 -     12001 GCTACGTGGT--CTTGT-----CC-CAAGG----CT----------------------------C----T----GGCATTG-A----------------TACAGCACCT-CC-AG-A-A--------T-----------------CA----CA--GT--AAAC
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002072 63 -  17673402 GTTCAGTGGT--CTTGG----TC--AGAA------T----------------------------C----TCTCCAACA-TC-G----------------CACAAGACCT-CC-AG-A-A--------A----------------GCA----TC--AT--CACC
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334530 63 -   7040546 GTTCAGTGGT--CTTGG----TC--AGAA------T----------------------------C----TCTCCAACA-TC-G----------------CACAAGACCT-CC-AG-A-A--------A----------------GCA----TC--AT--CACC
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  402813 63 -   1652518 GTTCAGTGGT--CTTGG----TC--AGAA------T----------------------------C----TCTCCAACA-TC-G----------------CACAAGACCT-CC-AG-A-A--------A----------------GCA----TC--AT--CACC
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17798893 43 -  60362399 --------------------------AAG------TC------T--------------------C----T----GACA-CT-A----------------CACAGCACCT-CT-AA-A-A--------A----------------GCA----TC--AT--CACC
i CanFam4.chr16                                          I 12 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184950 43 -    185531 --------------------------AAG------TC------T--------------------C----T----GACA-CT-A----------------CACAGCACCT-CT-AA-A-A--------A----------------GCA----TC--AT--CACC
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 12 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034336 43 -   9314153 --------------------------AAG------TC------T--------------------C----T----GACA-CT-A----------------CACAGCACCT-CT-AA-A-A--------A----------------GCA----TC--AT--CACC
i Canis_lupus_dingo.QKWQ01000480.1                       I 12 C 0
s Canis_lupus_familiaris.chr16                            17958601 43 -  59632846 --------------------------AAG------TC------T--------------------C----T----GACA-CT-A----------------CACAGCACCT-CT-AA-A-A--------A----------------GCA----TC--AT--CACC
i Canis_lupus_familiaris.chr16                           I 12 C 0
s Canis_lupus_orion.HG994398.1                            18500113 43 +  63665305 --------------------------AAG------TC------T--------------------C----T----GACA-CT-A----------------CACAGCACCT-CT-AA-A-A--------A----------------GCA----TC--AT--CACC
i Canis_lupus_orion.HG994398.1                           I 12 C 0
s Capromys_pilorides.CapPil_scaffold_65020                     847 38 -     12242 -----------------------------------T----------------------------G----T----AAGA-TT-A----------------CACAGCTACT-GC-AA-G-A--------C----------------ACA----TA--AT--GATC
i Capromys_pilorides.CapPil_scaffold_65020               I 103 C 0
s Carlito_syrichta.NW_007247396.1                           201124 57 +    308752 ----GACAGT--CCTGG-----TC-TGTCA----CT----------------------------C----T----AATGCTT-A----------------CACAGCACAG-CC-AG-A-A--------A----------------GCA----TG--GT---CAC
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                4541 62 -     11696 GCACAGTGAT--CTTGG--C--C--AGAG------TC------T--A---T-------------C----T----AACA-TT-A----------------CACAGAAC-C-CC-AG-A-A--------A----------------GCA----TC--CT--CCTC
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    136896 38 +    179628 -----------------------------------T----------------------------T----T----AACC-TT-A----------------CAGAACACCT-TC-AG-A-A--------A----------------GCA----TG--AT--TACC
i Castor_canadensis.CasCan_scaffold_2074                 I 25 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     92703 63 +    217609 GCTCAGTAGT--CTTGG--C--C--ACAG------T----------------------------C----TCTCCAGCA-CT-G----------------AACAGAACCT-CC-AG-A-A--------A----------------ATA----CC--AT--CACC
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          9549 61 -     11392 GCTACGTGGT--CTTGT-----CC-CAACG----CT----------------------------C----T----GGCATTG-A----------------TACAGCACCT-CC-AG-A-A--------T-----------------CA----CA--GT--AAAC
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               5647 61 -      7577 GCTACGTGGT--CTTGT-----CC-CAACG----CT----------------------------C----T----GGCATTG-A----------------TACAGCACCT-CC-AG-A-A--------T-----------------CA----CA--GT--AAAC
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25651677 61 +  26074798 GTTACGTGGT--CTGGT-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TACAGAACCT-CC-AA-A-A--------A-----------------CA----CA--GT--AAAC
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_398305                                 1253 61 +      1777 GTTACGTGGT--CTGGT-----CC-TGAGG----CT----------------------------C----T----GGCATCT-A----------------CACAGAACCT-CC-AA-A-A--------A-----------------CA----CA--GT--AAAC
i Cebus_olivaceus.k141_398305                            C 0 C 0
s Cebus_unicolor.k141_544048                                 49590 61 -     74725 GTTACGTGGT--CTGGT-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TACAGAACCT-CC-AA-A-A--------A-----------------CA----CA--GT--AAAC
i Cebus_unicolor.k141_544048                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         5130 57 +     31688 ----GACAGT--CCTGG-----TC-TGTCA----CT----------------------------C----T----AATGCTT-A----------------CACAGCACGG-CC-AG-A-A--------A----------------GCA----TG--GT---CAC
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12231129 63 +  27778364 GCTCAGTGGT--CTTGC--C--C--AGGG-TCTC-T----------------------------C----T----GACA-TT-A----------------CGCAGAACCT-CC-AG-A-A--------A----------------GCA----TC--AC--CACC
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2156 63 -     25243 GCTCAGTGGT--CTTGC--C--C--AGGG-TCTC-T----------------------------C----T----GACA-TT-A----------------CGCAGAACCT-CC-AG-A-A--------A----------------GCA----TC--AC--CACC
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4475329 61 +   4669795 GTTAA-TGCT--GTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        13874 61 -     19203 GTTAA-TGCT--GTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3342297                            490 61 -     14043 GTTAA-TGCT--GTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           8526 61 +     27781 GTTAA-TGCT--GTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         8691 61 -     20310 GTTAA-TGGT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          11670 61 +     29689 GTTAA-TGGT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            6424 61 -     20078 GTTAA-TGCT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GA--GT--AAAC
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          14349 59 -     27936 GTTAA-TGGT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCAT---A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            3214 59 -     17152 GTTAA-CGGT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCA--T-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38816750 61 +  39242232 GTTAA-TGGT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222444 59 -  21565898 GTTAA-TGGT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCA--T-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       39562 59 -     53127 GTTAA-TGGT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCA--T-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        6829 61 +      7159 GTTAA-TGGT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14361 61 -     27947 GTTAA-TGGT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-GC-AA-A-A--------C----------------GCA----GG--GT--AAAC
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         14338 59 +     17596 GTTAA-TGGT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCA--T-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                           383 61 +     14005 GTTAA-TGCT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             236 62 -      8501 GCTAAGTGGT--CCGGG-----C-TGGGG------TC------TC-----T-------------C----T----AGCA-TC-A----------------CACAGCACC--CC-AG-A-A--------G----------------TCA----CA--AC--CACC
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             20864 61 -     52598 GTGCAGTGGT--CTTGG-----CC-AGAGT----CT----------------------------C----C----AACA-TT-A----------------CGTAGCACCC-GC-AG-G-A--------A----------------GCA----TA--GT--CACC
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16229 61 +     57038 GTGCAGTGGT--CTTGG-----CC-AGAGT----CT----------------------------C----C----AACA-TT-A----------------CGCAGCACCC-GC-AG-G-A--------A----------------GCA----TA--GT--CACC
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1252596 38 +   2543920 -----------------------------------T----------------------------T----T----AACA-TT-A----------------CATAGCAACT-GC-AG-A-A--------A----------------GCA----TA--AT--GGCC
i Chinchilla_lanigera.JH722012.1                         I 1066 C 0
s Chiropotes_albinasus.k141_2813271                          10801 61 +     11226 GTTACGTGGT--CTTGT-----CT-CGAGG----TT----------------------------C----T----GGCATTG-A----------------TACAGCACCT-CC-AA-A-A--------T-----------------CA----CA--GT--AAAC
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18428320 61 -  18827391 GTTAA-TGCT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       14757 61 -     50209 GTTAA-TGCT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TACAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135421757 61 + 135778131 GTTAA-TGCT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 18041 36 +     19366 ----------------------------------------------------------------C----T----AACA-TC-A----------------CACAGCACC--CC-AG-A-A--------A----------------GCA----TA--AT--CACC
i Choloepus_didactylus.ChoDid_scaffold_45914             I 18 C 0
s Choloepus_hoffmanni.KN194906.1                            173116 36 +    839153 ----------------------------------------------------------------C----T----AACA-TC-A----------------CACAGCACC--CC-AG-A-A--------A----------------GCA----TA--AT--CACC
i Choloepus_hoffmanni.KN194906.1                         I 18 I 1
s Colobus_angolensis.KN981557.1                            1910262 61 +   2368649 GTTAA-TGCT--CTTGC-----CC-TCAGG----CT----------------------------C----T----GGCATGT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_polykomos.k141_906115                              36800 61 +     84244 GTTAA-TGCT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATGT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17547796 64 -  53390261 GCTCAGACAT--CTTAG--C--C--AGAG------TCC-C----C-------------------C----T----CATA-AT-A----------------CACAGAATCT-CC-AAAA-A--------A----------------GCA----TC--AT--CACC
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14118 59 -     20389 GTACAGTAGT--CTTGG--C--T--AGAG------TC------TC-----T-------------C----T---------TA-A----------------CACAGAACCT-CC-AG-A-G--------A----------------GCA----TC--AT--CACC
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 49906 42 +     63868 -----------------------------------T----------------------------C----T----AACA-CA-G----------------TGCAGCACCT-TC-AA-A-A--------T----------------GCATCCATC--CT--CATC
i Cricetomys_gambianus.CriGam_scaffold_18520             I 23 C 0
s Cricetulus_griseus.LT883664.1                           11667400 42 + 224834208 -----------------------------------T----------------------------G----T----ACCA-TG-A----------------TGAATCACCT-TC-AG-A-A--------A----------------TCCTCCATC--CT--TGTC
i Cricetulus_griseus.LT883664.1                          I 23 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               2686 66 -     19598 -GTCAATGATCTTGAAGA----T--AGAA------T----------------------------TGTTCT----AATA-TT-G----------------CACAGAATCT-CC-AA-AAG--------A----------------ATG----TC--CTGTGGC-
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28189 61 -     87169 ATTCAGTGGT--CTTGG--C--C--AGAG------T-------T------T-------------C----T----AACA-TT-C----------------AACAGGACCT-CC-AA-A-A--------A----------------ATA----TC--AT--CACC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    836898 38 +   1526836 -----------------------------------T----------------------------C----T----AACA-TC-A----------------TACCACACCT-CA-AG-A-A--------A----------------GCA----TA--AT--GACT
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 19 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35547 38 +     51376 -----------------------------------T----------------------------C----T----AACA-TT-A----------------CACAGCAACT-TC-AG-A-A--------A----------------GTA----TA--AT--GGCC
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 102 C 0
s Dasypus_novemcinctus.JH564415.1                            63248 59 +   2246927 GCCAATTGGT--CCTGG-----C-TCGCG------TC------T--------------------C----T----AATA-TC-A----------------CACAGCACC--AC-AG-A-A--------G----------------GCA----TC--AT--CGC-
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537093 61 -  12879189 GTTGTGTGGT--CTTGG-----CC-AGAGC----CT----------------------------C----T----AACA-TT-A----------------CGTAGCACCT-CC-AG-G-A--------A----------------GCC----TG--GC--CACC
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8629555 63 +  20541912 GCACAGTGAT--CTTGG--C--C--AGAG------TC------T--A---T-------------C----C----AACA-TT-A----------------CACGGAACCT-CC-AG-A-A--------A----------------GCA----TC--CT--CCTC
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  672980 63 +   1390856 gctcagtggT--CTTGC--C--C--AGGG-TCTC-T----------------------------C----T----AATA-TT-A----------------CGCAGAACCT-CC-AG-A-A--------A----------------GCA----TC--AC--CACC
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    5732 63 +    198055 GCTCAGTGGT--CTTGC--C--C--AGGG-TCTC-T----------------------------C----T----GACA-TT-A----------------CGCAGAACCT-CC-AG-A-A--------A----------------GCA----TC--AC--CACC
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36189 38 +     67921 -----------------------------------T----------------------------C----T----AACA-CT-A----------------CACAGCAACT-GC-AG-A-A--------A----------------GCA----TA--AT--GGCC
i Dinomys_branickii.DinBra_scaffold_21862                I 1073 C 0
s Echinops_telfairi.JH980293.1                            48780116 62 + 111700974 ATTATTTGGT--CTTAG-----C-TACAT------TC------T----G-T-------------C----T----AATA-TC-A----------------CATAGCACCC-TC-A--A-A--------A----------------GGA----TA--AT--CACT
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.KE759718.1                                  10226 61 +     11740 GTTCAGTGGT--CTTGG--C--C--AGAG------TC------TC-----T-------------C----T----AAC---A-A----------------CACAGAACCT-CC-AT-A-A--------A----------------GCA----TT--AG--CACC
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1097420 61 +  10337057 ATTCAGCAGT--GTTGG-----C-TGCAG------TC------T----G-T-------------C----T----AACA-TC-A----------------CACAACACCC-CC-AG-A-A--------A----------------GCA----TA--AT--CA--
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          20133 42 -    110024 -----------------------------------T----------------------------G----T----TACA-TG-A----------------CGCAGCACCT-TC-AG-A-A--------A----------------TCCTCCATC--CT--CGTC
i Ellobius_lutescens.LOEQ01008920.1                      I 21 C 0
s Ellobius_talpinus.LOJH01081419.1                             264 42 +      8657 -----------------------------------T----------------------------G----T----TACA-TA-A----------------TGCAGCACCT-TC-AG-A-A--------A----------------TCCTCCATC--CT--CGTC
i Ellobius_talpinus.LOJH01081419.1                       I 21 C 0
s Enhydra_lutris.KZ291758.1                               16329024 49 -  41312741 GTTCAGCAGC--CTTGG--C--C--AAAG------TC------T--------------------C----T----AACT-TT-A----------------CACAGCACCT-CA-AA-A-A--------------------------------------------
i Enhydra_lutris.KZ291758.1                              C 0 I 11
s Eptesicus_fuscus.JH977646.1                              2145435 37 -  14770903 NNNNNNNNNN--NNTGG--C--C--AGAG------TC------TC-----T-------------C----T----AATG-TT-G----------------CA--------------------------------------------------------------
i Eptesicus_fuscus.JH977646.1                            C 0 I 7
s Equus_asinus.JREZ01000139.1                              1283252 59 +   4378816 GTTCAGTGGT--CCTGG--C--C--AGAG------T----------------------------C----T----AACA-CT-A----------------CACAGAACCC-CC-AG-A-A--------A----------------CCA----TC--AT--AACC
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18531072 60 -  39960074 GTTCAGTGGT--CCTGG--C--C--AGAG------T----------------------------C----T----AACA-CTAA----------------CACAGAACCC-CC-AG-A-A--------A----------------CCA----TC--AT--AACC
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               33101 59 +    498745 GTTCAGTGGT--CCTGG--C--C--AGAG------T----------------------------C----T----AACA-CT-A----------------CACAGAACCC-CC-AG-A-A--------A----------------CCA----TC--AT--AACC
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3328024  4 -   7059049 ------atat---------------------------------------------------------------------------------------------------------------------------------------------------------
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21204927 61 -  21539334 GTTAA-TGCT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13589 61 -     14127 GTGGAGTGGT--CTCAG-----CC-AGAGT----CG----------------------------C----T----AGCA-TT-A----------------CGTCGCACCC-CC-AG-G-A--------A----------------GCA----TA--GT--CACC
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6290 63 -     16928 GTGGAGTGGT--CTCAG-----CC-AGAGT----CG----------------------------C----T----AGCA-TT-A----------------CGTCGCACCC-CC-AG-G-A--------A----------------GCA----TATAGT--CACC
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15316 61 -     25546 GTGGAGTGGT--CTCAG-----CC-AGAGT----TG----------------------------C----T----AGCA-TT-A----------------CGTCGCACCC-CC-AG-G-A--------A----------------GCA----TA--GT--CACC
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12520 61 +     26330 GTGGAGTGGT--CTCAG-----CC-AGAGT----CG----------------------------C----T----AGCA-TT-A----------------CGTAGCACCC-CC-AG-G-A--------A----------------GCA----TA--GT--CACC
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 13753 63 +     23973 GTGGAGTGGT--CTCAG-----CC-AGAGT----CG----------------------------C----T----AGCA-TT-A----------------CGTCGCACCC-CC-AG-G-A--------A----------------GCA----TATAGT--CACC
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12517 61 +     75513 GTGGAGTGGT--CTCAG-----CC-AGAGT----CG----------------------------C----T----AGCA-TT-A----------------CGTAGCACCC-CC-AG-G-A--------A----------------GCA----TA--GT--CACC
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10448 60 +     97555 GTGGAGTGGT--CTCAG-----CC-AGAGT----CG----------------------------C----T----AGCA-TT-A----------------CGTCGCACCC-C--AG-G-A--------A----------------GCA----CA--GT--CACC
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            13379 61 +     26496 GTGGAGTGGT--CTCAG-----CC-AGAGT----CT----------------------------C----T----AGCA-TT-A----------------CGTAGCACCC-CC-AG-G-A--------A----------------GCA----TA--GT--CACC
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  3989 63 -     17153 GTGGAGTGGT--CTCAG-----CC-AGAGT----CG----------------------------C----T----AGCA-TT-A----------------CGTCGCACCC-CC-AG-G-A--------A----------------GCA----TATAGT--CACC
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13564 61 +    111500 GTGGAGTGGT--CTCAG-----CC-AGAGT----CG----------------------------C----T----AGCA-TT-A----------------CGTCGCATCC-CC-AG-G-A--------A----------------GCA----TA--GT--CACC
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20236677 61 + 206538554 ATTCAGGGGT--CTTGG--C--C--AGAG------T-------T------T-------------C----T----AACA-TT-C----------------AACAGCACCT-CC-AA-A-A--------A----------------GCA----TT--GT--CACC
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195520 61 + 205367284 ATTCAGGGGT--CTTGG--C--C--AGAG------T-------T------T-------------C----T----AACA-TT-C----------------AACAGCACCT-CC-GA-A-A--------A----------------GCA----TT--GT--CACC
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  9034 61 -     36744 ATTCAGGGGT--CTTGG--C--C--AGAG------T-------T------T-------------C----T----AACA-TT-C----------------AACAGCACCT-CT-GA-A-A--------A----------------GCA----TT--GT--CACC
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             849170 38 +   3816255 -----------------------------------t----------------------------c----t----aACA-TT-A----------------TACAGCAAGT-CC-AG-A-A--------A----------------GCA----TA--AT--GGTC
i Fukomys_damarensis.KN121974.1                          I 531 C 0
s Galago_moholi.ctg2040                                     426475 24 -    453645 -------------------------------------------------------------------------------------------------------ACACCT-GC-AG-G-A--------A----------------TCA----AA--GT--CACC
i Galago_moholi.ctg2040                                  I 14 C 0
s Galago_senegalensis.k141_631886                             4166 24 +     11339 -------------------------------------------------------------------------------------------------------ACACCT-GC-AG-G-A--------A----------------TCA----AA--GT--CACC
i Galago_senegalensis.k141_631886                        I 14 C 0
s Galagoides_demidoff.k141_1711393                            1480 23 +     41679 -------------------------------------------------------------------------------------------------------ACACCT-GC-AG-G-A--------A----------------TC-----AA--GT--CGCC
i Galagoides_demidoff.k141_1711393                       I 14 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840                926 63 -      9135 GTTAACTGGT--CTTGG-----CC-AGAGT----CT----------------------------T----T-T-TAACA-TT-G----------------CATAGCACCT-CC-AC-A-A--------A----------------GCA----TA--AT--CATC
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              15707 62 -     32273 GATAAGTGAT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-CC-AA-A-A--------A----------------GCA----CA--GT--AAAC
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186337853 62 + 186649187 GATAAGTGAT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-CC-AA-A-A--------A----------------GCA----CA--GT--AAAC
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6627 61 -     19426 GTGGAGTGGT--CTCGG-----CC-AGAGT----CG----------------------------C----T----AGCA-TT-A----------------CGTAGCACCC-CC-AG-G-A--------A----------------GCA----TA--GT--CACC
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             11776 61 -     15286 GTGGAGTGGT--CTCGG-----CC-AGAGT----CG----------------------------C----T----AGCA-TT-A----------------CGTAGCACCC-CC-AG-G-A--------A----------------GCA----TA--GT--CAGT
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13415 61 +     18253 GTGGAGTGGT--CTCGG-----CC-AGAGT----CG----------------------------C----T----AGCA-TT-A----------------CGTAGCACCC-CC-AG-G-A--------A----------------GCA----TA--GT--CAGT
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13516 61 -     41752 GTGGAGTGGT--CTCGG-----CC-AGAGT----CG----------------------------C----T----AGCA-TT-A----------------CGTAGCACCC-CC-AG-G-A--------A----------------GCA----TA--GT--CACT
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13353 61 -     16460 GTGGAGTGGT--CTCGG-----CC-AGAGT----CG----------------------------C----T----AGCA-TT-A----------------CGTAGCACCC-CT-AG-G-A--------A----------------GCA----TA--GT--CACT
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242023 61 +    327341 ATTCAGTGGT--CTTGG--C--C--AGAG------T-------T------T-------------C----T----AACA-TT-C----------------AACAGCACCT-CC-AA-A-A--------A----------------ACA----TC--AT--CACC
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20662022 35 +  22651954 -----------------------------------t----------------------------c----t----aaCA-TT-A----------------CAC---AAGT-CC-AC-A-A--------A----------------GCA----TA--AC--AGTC
i Heterocephalus_glaber.JH602082.1                       I 1939 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                 594 63 +      7595 ATTCAAGGGT--CTTGG-----C-TAGAG------TC------T----G-T-------------C----T----AACA-TT-A----------------CACAGTACAC-CC-AG-A-A--------A----------------ACA----TA--AC--CACC
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hoolock_leuconedys.ctg274                                    434519 62 +    630532 GTTAAGTGGT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATtt-a----------------tatagcacct-cc-aa-a-a--------a----------------gaa----ca--gt--aaac
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  44717 61 +     55795 ATACAGCGGT--CTCGG--C--A--AGAG------T-------T------T-------------C----T----AACA-TT-C----------------AACAGCACCT-CC-AA-A-A--------A----------------GCA----TC--AT--CACC
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hylobates_agilis.k141_232023                                2285 45 -     12752 GTTAAGTGGT--CTTGC-----CC-TGAGG----CT----------------------------C----A----GGCATTT-A----------------TATAGCAGCT-C----------------------------------------------------
i Hylobates_agilis.k141_232023                           C 0 C 0
s Hylobates_klossii.k141_240831                               2329 45 +     14092 GTTAAGTGGT--CTTGC-----CC-TGAGG----CT----------------------------C----G----GGCATTT-A----------------TATAGCAGCT-C----------------------------------------------------
i Hylobates_klossii.k141_240831                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189543112 45 - 191637585 GTTAAGTGGT--CTTGC-----CC-TGAGG----CT----------------------------C----G----GGCATTT-A----------------TATAGCAGCT-C----------------------------------------------------
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3336007 45 -  11177569 GTTAAGTGGT--CTTGC-----CC-TGAGG----CT----------------------------C----G----GGCATTT-A----------------TATAGCAGCT-C----------------------------------------------------
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      82735 33 +    135385 ----------------------------------------------------------------------------CA-TT-A----------------CACAGCAACA-GC-AG-A-A--------A----------------GCA----TA--AT--GGCC
i Hystrix_cristata.HysCri_scaffold_5660                  I 1077 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7520676 29 -   7955117 ----------------------------------------------------------------------------------A----------------CATAGAACCT-TC-AG-A-A--------A----------------ATA----TA--AT--CAGC
i Ictidomys_tridecemlineatus.JH393364.1                  I 1 C 0
s Indri_indri.k141_3655594                                   22306 61 +     31101 CTGGAGTGGT--CTTGG-----CC-AGAGT----CT----------------------------C----T----AGCA-TT-A----------------CACAGCACCT-CC-AG-G-A--------A----------------GCA----TA--GT--CACC
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8276650 33 -   9596543 ---------------------------------------------------------------------------ACA-AT-A----------------TACAGCCTAC-AT-GT-A-A--------A----------------GTA----CA--TT---CTC
i Jaculus_jaculus.JH725527.1                             I 21 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    13833 62 -     42476 GTTTAGTGGT--CTTAG--C--C--AGAG------TC------TC-----T-------------C----T----AATG-CT-G----------------CACAGAACCC-CC-AG-A-A--------A----------------GCA-----C--AT--CATC
i Lasiurus_borealis.LasBor_scaffold_32767                I 301 C 0
s Lemur_catta.scaffold_24                                 15523868 61 -  30322482 GTGGAGTGGT--CTCAG-----CC-AGAGT----CG----------------------------C----T----AGCA-TT-A----------------CGTAGCACCC-CC-AG-G-A--------A----------------GCA----TA--GT--CACC
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7186 61 +     64341 GTTACGTGGT--CTTGT-----CT-CGAGG----TT----------------------------C----T----GGCATTG-A----------------TACAGCACCT-CC-AA-A-A--------T-----------------CA----CA--GT--AAAC
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           4509 61 +      4941 GTTACGTGGT--CTTGT-----CT-CGAGG----TT----------------------------C----T----GGCATTG-A----------------TACAGCACCT-CC-AA-A-A--------T-----------------CA----CA--GT--AAAC
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        7227 61 +     35603 GTTACGTGGT--TTTGT-----CT-CGAGG----TT----------------------------C----T----GGCATTG-A----------------TACAGCACCT-CC-AA-A-A--------T-----------------CA----CA--GT--AAAC
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    28699 60 +     38576 GCTACGTGGG--CTTGT-----CC-C-AAG----CT----------------------------C----T----GGCATTG-A----------------TACGGCACCT-CC-AA-A-A--------T-----------------CA----CA--GT--AAAC
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         25396 60 +     66356 GCTACGTGGG--CTTGT-----CC-C-AAG----CT----------------------------C----T----GGCATTG-A----------------TACGGCACCT-CC-AA-A-A--------T-----------------CA----CA--GT--AAAC
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         10766 61 -     23766 GTGCAGTGGT--CTTGG-----CC-AGAGT----CT----------------------------C----T----AGCA-TT-A----------------TGTAGCACCC-CC-AG-G-A--------A----------------GCA----CA--GT--CACC
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             28827 61 +     45836 GTGCAGAGGT--CTTGG-----CC-AGAGT----CT----------------------------C----T----AGCA-TT-A----------------TGTAGCACCC-CC-AG-G-A--------A----------------GCA----CA--GT--CACC
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1363 61 +     25010 GGGCAGTGGT--CTTGG-----CC-AGAGT----CT----------------------------C----T----AGCA-TT-A----------------TGTAGCACCC-CC-AG-G-A--------A----------------GCA----TA--GT--CACC
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      26763 61 +     54090 GTGCAGTGGT--CTTGG-----CC-AGAGT----CT----------------------------C----T----AGCA-TT-A----------------TGTAGCACCC-CC-AG-G-A--------A----------------GCA----CA--GT--CACC
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3042547 61 +   3914936 GTTCAGTGGT--CTTGG--C--C--AAAG------TC------T--------------------C----T----AACA-TT-A----------------CACAGCACCT-CC-AA-A-A--------G----------------GCA----TC--AT--CACC
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6213 47 -     14121 -------------------------------------------------------------------------------AT-ACACCAGTTTCTTACTACACAGCACCT-CC-CA-A-T--------A----------------CCA----CT--CC--CACC
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1436876 61 +   1826925 GTTAA-TGCT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCC----GG--GT--AAAC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5723 24 +     11245 -------------------------------------------------------------------------------------------------------ACACCT-GC-AG-G-A--------A----------------GCA----AA--GT--CGCC
i Loris_lydekkerianus.k141_2539221                       I 14 C 0
s Loris_tardigradus.ctg83                                  1004543 24 +   6120653 -------------------------------------------------------------------------------------------------------ACACCT-GC-AG-G-A--------A----------------GCA----AA--GT--CGCC
i Loris_tardigradus.ctg83                                I 14 C 0
s Loxodonta_africana.GL010049.1                            4217022 63 -  43346337 GTTCAGTGAT--CTTGT-----C-TAGAG------TC------T----G-T-------------C----C----AACA-TT-A----------------CACAGCACCC-CT-GG-A-A--------A----------------GCA----TA--AT--CACC
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17954841 43 -  59628241 --------------------------AAG------TC------T--------------------C----T----GACA-CT-A----------------CACAGCACCT-CC-AA-A-A--------A----------------GCA----TC--AT--CGCC
i Lycaon_pictus.CM007581.1                               I 12 C 0
s Macaca_arctoides.k141_2326796                               6686 61 +     40492 GTTAA-TGTT--GTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59675945 61 +  60120075 GTTAA-TGTT--GTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 12458 61 -     26193 GTTAA-TGTT--GTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            80242 61 -    114318 GTTAA-TGTT--GTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  5933 61 -     23192 GTTAA-TGTT--GTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                15402 61 -     29190 GTTAA-TGTT--GTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  23967 61 +     37952 GTTAA-TGTT--GTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186839056 61 + 187317192 GTTAA-TGTT--GTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25457619 61 -  25927173 GTTAA-TGTT--GTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  79815 61 +     89720 GTTAA-TGTT--GTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 6816 61 +     20474 GTTAA-TGTT--GTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   6616 61 -     14993 GTTAA-TGTT--GTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  329482 61 -    668171 GTTAA-TGTT--GTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 4932 61 -     24072 GTTAA-TGTT--GTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               25554 61 -     45290 GTTAA-TGTT--GTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90323 63 +     94391 GTTCAGTGGT--CTGGGA----C--AGAG------TC------TC-----T-------------C----T----AACG-TA-A----------------CACAGAACCT-CC-AG-A-A--------A----------------GCA----TT--AG--CACC
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23937149 61 -  24302211 GTTAA-TGCT--GTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               351277 61 +    752769 GTTAA-TGCT--GTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33102857 29 -  40650429 ----------------------------------------------------------------------------------A----------------CATAGAACCT-TC-AG-A-A--------A----------------GTA----TA--AT--CAGC
i Marmota_marmota.CZRN01000018.1                         I 1 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        10032 63 -    207569 ATTCAGTGGT--CCTGG--C--C--AGAG------TC------TC-----T-------------C----T----AACA-TT-A----------------CACAGAACCT-GC-AG-A-A--------A----------------GCA----TC--AC--CACC
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              9738 70 +     13704 GTTCAGCAGC--CTTGG--C--C--AAAG------TC------T--------------------C----T----AACT-TT-A----------------CACAGCACCT-CA-AA-A-A--------A-------AAAAAAAAAAAA----AC--AG--CACC
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 32581 42 +    140813 -----------------------------------T----------------------------G----T----AATA-TG-A----------------GGCAATGTCT-TC-AG-A-A--------A----------------GCATCCATC--CT--CGTT
i Meriones_unguiculatus.MerUng_scaffold_7390             I 23 C 0
s Mesocricetus_auratus.KB708134.1                         12182078 42 -  29670104 -----------------------------------T----------------------------G----T----AGCT-TA-C----------------AGAAACACCT-TC-AG-A-A--------A----------------TCCTCCATC--CT--TGTC
i Mesocricetus_auratus.KB708134.1                        I 23 C 0
s Mico_argentatus.k141_1239457                                5464 61 -      7380 GCTACGGGGT--CTTGT-----CC-GAAGC----CT----------------------------C----T----GGCATTG-A----------------TACAGCACCT-CC-AG-A-A--------T-----------------CA----CA--GT--AAAC
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               4537 61 +     18990 GCTACGGGGT--CTTGT-----CC-GAAGC----CT----------------------------C----T----GGCATTG-A----------------TACAGCACCC-CC-AG-A-A--------T-----------------CA----CA--GT--AAAC
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      5476 61 -      7356 GCTACGGGGT--CTTGT-----CC-GAAGC----CT----------------------------C----T----GGCATTG-A----------------TACAGCACCT-CC-AG-A-A--------T-----------------CA----CA--GT--AAAC
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18291288 61 -  93316391 GTGCGGTGGT--CTTGG-----CC-GGAGT----CC----------------------------C----C----AGCA-TT-A----------------CGTATGACCC-AC-AG-G-A--------T----------------GCA----TA--GT--CACC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    21855 62 -    145209 ACTATTTGAT--CTTAG-----C-TTCAT------CC------T----GC--------------C----T----AATA-TC-A----------------TGCAGAACCC-TC-A--A-A--------A----------------GAA----TA--AT--CACT
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                15119 36 -     19307 ---------------------------------------------------------------------T----AACA-TT-C----------------CACGGAACCT-CC-GG-C-A--------A----------------GCA----TC--AC--CCTC
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 23 C 0
s Microtus_ochrogaster.CM001695.1                         11260312 42 -  27267610 -----------------------------------T----------------------------G----T----TACA-TG-A----------------TGCAGCACCT-TC-AG-A-A--------A----------------TCCTCCATC--CT--CGTC
i Microtus_ochrogaster.CM001695.1                        I 1598 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850331 59 +   8254450 GTTTCCTGGC--CTGGAAACATT--AGAG------TCC-C---T--------------------T----T----AACA-TT-A----------------CACTCAGCCT-CC-AG-A-A--------A----------------GCA----------------
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 3
s Miniopterus_schreibersii.MinSch_scaffold_18080             34008 59 +     64694 GTTTCCTGGC--CTGGAAACATT--AGAG------TCC-C---T--------------------C----T----AACA-TT-A----------------CACTCAGCCT-CC-AG-A-A--------A----------------GCA----------------
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 3
s Miopithecus_ogouensis.k141_534055                           8874 61 -     28506 GTTAA-TGGT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         5415 61 -      8324 GTTCAGTGGT--CTTGG--C--C--AAAG------TC------T--------------------C----T----AACA-TT-A----------------CACAGCACCT-CC-AA-A-A--------G----------------GCA----TC--AT--CACC
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      8833 61 -     37649 GTGCAGTGGT--CTTGG-----CT-GGAGT----CC----------------------------C----C----AGCA-TT-A----------------CAAAGCACCC-AC-GG-G-A--------A----------------GCA----TA--GT--CACC
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141038 63 -    366855 GCTCAGTGAT--CTTGG--C--C--AGAG------TC------TC-----T-------------G----T----AACA-TT-A----------------CACGGGACCT-CC-AG-A-A--------A----------------GCA----TC--AT--CCTC
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35122 61 +     37127 ATTCGGTGGT--CTTGG--C--C--AGAG------T-------T------T-------------C----T----AACA-TT-C----------------AACAGCACCT-CC-AA-A-A--------A----------------ACA----TC--AT--CACC
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           6512 62 +     14753 GTTGAGTAGT--CTTGG--C--C--AGAG------TC------TC-----T-------------C----T----AGCA-TT-A----------------CACGGAACAC-CC-CG-A-A--------A----------------GTA-----C--AT--CATC
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84361197 39 - 120012414 -----------------------------------T----------------------------G----C-------A-TC-A----------------TGCAGTGCCT-TC-AG-A-A--------A----------------GCATCCATC--CT--CGTC
i Mus_caroli.LT608237.1                                  I 22 C 0
s Mus_musculus.chr8                                       87650195 39 - 129401213 -----------------------------------T----------------------------G----C-------A-TC-A----------------TGCAGTGCCT-TC-AC-A-A--------A----------------GCATCCATC--CT--CGTC
i Mus_musculus.chr8                                      I 22 C 0
s Mus_pahari.LT608297.1                                   31354851 42 -  89631738 -----------------------------------T----------------------------G----C----AACA-TC-A----------------CGCAGTGCCT-TC-AG-A-A--------A----------------GCACCCATC--CT--CCTC
i Mus_pahari.LT608297.1                                  I 22 C 0
s Mus_spretus.CM004101.1                                  90752256 39 - 130317789 -----------------------------------T----------------------------G----C-------A-TC-A----------------TGCAGTGCCT-TC-AC-A-A--------A----------------GCATCCATC--CT--CGTC
i Mus_spretus.CM004101.1                                 I 22 C 0
s Mustela_putorius.JH418006.1                               300922 77 -  14710649 GTTCATCAGC--CTTGG--C--C--AAAG------TC------T--------------------C----T----AACT-TT-A----------------CACAGcacct-ca-aa-a-c--------aaacaaacaaacaaacaaaa----aa--at--cacc
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71034 38 -     80779 -----------------------------------T----------------------------G----T----AAGA-TT-A----------------CACAGCCACT-GC-AG-G-A--------A----------------GCA----TA--GT--GGCC
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 103 C 0
s Myotis_brandtii.KE162005.1                                280157 62 -  10118263 GTTGAGTGGT--CTTGG--C--C--AGAG------TC------TC-----T-------------C----T----AATG-TT-A----------------CACGGAACCC-CC-AG-A-A--------A----------------GCA-----C--AT--CATC
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1587425 62 -   6019432 GTTGAGTGGT--CTTGG--C--C--AGAG------TC------TC-----T-------------C----T----AACG-TT-A----------------CACGGAACCC-CC-AG-A-A--------A----------------GCA-----C--AT--CATC
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3903511 62 -   4330536 GTTGAGTGGT--CTTGG--C--C--AGAG------TC------TC-----T-------------C----T----AATG-TT-A----------------CACGGAACCC-CC-AG-A-A--------A----------------GCA-----C--AT--CATC
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_482318                         185 62 -       721 GTTGAGCGGT--CTTGG--C--C--AGAG------CC------TC-----T-------------C----T----AACG-TT-A----------------CACGGAACCC-CC-AG-A-A--------A----------------GCA-----C--AT--CGTC
i Myotis_myotis.MyoMyo_scaffold_482318                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              188957 70 +    196477 GT-AAGGGGT--TTGGG-----C-TACAG------TCC-----T------T-------------C----T----AGCA-TC-A----------------CACAGCAAA-TGC-AA-A-AAATCGAAAA----------------GCA----AA--AT--CACC
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2033898 35 -   3037898 --------------------------------------------------------------------------AACA-GG-A----------------CGCAGCACCT-CC-AA-A-A--------A----------------ATA----TT--CT--CATC
i Nannospalax_galili.KL204047.1                          I 21 C 0
s Nasalis_larvatus.k141_413338                               14849 61 +     21681 GTTAA-TGTT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATGT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306669 61 +  31847680 GTTCAGTGGT--CTTGG--C--C--AAAG------TC------T--------------------C----T----AACA-TT-A----------------CACAGCACCT-CC-AA-A-A--------G----------------GCA----TC--AT--CACC
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149095 43 -   9404916 --------------------------AAG------TC------T--------------------C----T----GACA-CT-A----------------CACAGCACCT-CC-AA-A-A--------A----------------GCG----TC--AT--CGCC
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 12 C 0
s Nycticebus_bengalensis.LG01                            102579515 24 - 196305487 -------------------------------------------------------------------------------------------------------ACACCT-GC-AG-G-A--------A----------------GCA----AA--GT--TGCC
i Nycticebus_bengalensis.LG01                            I 14 C 0
s Nycticebus_coucang.k141_771082                              1360 24 -      2667 -------------------------------------------------------------------------------------------------------ACACCT-GC-AG-G-A--------A----------------GCA----AA--GT--TGCC
i Nycticebus_coucang.k141_771082                         I 14 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749943 24 + 199412804 -------------------------------------------------------------------------------------------------------ACACCT-GC-AG-G-A--------A----------------GCA----AA--GT--TGCC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 14 C 0
s Octodon_degus.JH651603.1                                  746629 38 +  11899542 -----------------------------------N----------------------------N----N----NNNN-NN-N----------------NNNNNNNNNN-NN-NN-N-N--------N----------------NNN----NN--NN--NNNN
i Octodon_degus.JH651603.1                               I 515 C 0
s Odobenus_rosmarus.KB229312.1                              506354 61 -   2017862 GTTCAGTGGT--CTTGG--C--C--AAAG------TC------T--------------------C----T----AACA-TT-A----------------CACAGCACCT-CC-AA-A-A--------G----------------GCA----TC--AT--CACC
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   24980 42 +     28053 -----------------------------------T----------------------------G----T----TACA-TG-A----------------TGCAGCACCT-TC-AG-A-A--------A----------------TCCTCCATT--TT--CGTC
i Ondatra_zibethicus.OndZib_scaffold_46174               I 21 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    79981 42 +    102263 -----------------------------------T----------------------------G----T----AACA-TG-A----------------TGCAGCACCT-TC-AG-A-A--------G----------------GCCTCCATC--CT--CATC
i Onychomys_torridus.OnyTor_scaffold_2986                I 21 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9541 63 -     18566 GTTCAGAAGT--CTTGG-----C-TAGAG------TC------T----G-T-------------C----T----AACA-TC-A----------------CACAGCACCC-CC-AG-A-A--------A----------------GCA----TA--AT--CACC
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147112 28 + 174332312 ---------------------------------------------------------------------------------------------------CACAGCACCT-CC-CA-A-T--------A----------------CCA----CT--CC--CACC
i Oryctolagus_cuniculus.CM000791.1                       I 16 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462063 43 -    559221 --------------------------AAG------TC------T--------------------C----T----GACA-CT-A----------------CACAGCACCT-CC-AA-A-A--------A----------------GCA----TC--AT--CGCC
i Otocyon_megalotis.JAEUCK010005147.1                    I 12 C 0
s Otolemur_crassicaudatus.k141_222918                         4007 24 +      8798 -------------------------------------------------------------------------------------------------------ACATCT-GC-AG-G-A--------A----------------TCA----AA--GT--CGCC
i Otolemur_crassicaudatus.k141_222918                    I 14 C 0
s Otolemur_garnettii.GL873799.1                             696170 24 -   1103335 -------------------------------------------------------------------------------------------------------ACATCG-GC-AG-G-A--------A----------------TCA----AA--GT--CGCC
i Otolemur_garnettii.GL873799.1                          I 14 C 0
s Pan_paniscus.KQ411613.1                                    43800 62 +     80009 GATAAGTGAT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-CC-AA-A-A--------A----------------GCA----CA--GT--AAAC
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189142708 62 + 189151597 GATAAGTGAT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-CC-AA-A-A--------A----------------GCA----CA--GT--AAAC
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  150879 61 +    230217 ATTCAGGGGT--CTTGG--C--C--AGAG------T-------T------T-------------C----T----AACA-TT-C----------------AACAGCACCT-CT-GA-A-A--------A----------------GCA----TC--GT--CACC
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                264085 61 +  18783137 ATTCAGGGGT--CTTGG--C--C--AGAG------T-------T------T-------------C----T----AACA-TT-C----------------AACAGCACCT-CT-GA-A-A--------A----------------GCA----TC--AT--CACC
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4720964 61 -   8748460 ATTCAGGGGT--CTTGG--C--C--AGAG------T-------T------T-------------C----T----AACA-TT-C----------------AACAGCACCT-CT-GA-A-A--------A----------------GCA----TC--GT--CACC
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183442899 61 + 183742232 GTTAA-TGCT--GTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             6597 61 +     20448 GTTAA-TGCT--GTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563405 61 +  20919399 GTTAA-TGCT--GTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   5341 61 +     41871 GTTAA-TGCT--GTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     8626 61 +     27711 GTTAA-TGCT--GTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  8707 61 +      9205 GTTAA-TGCT--GTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12356 61 -     78924 ATTCAGTAGT--CTTGG----GT--AGAG------T-------T------T-------------C----T----ACCA-TT-C----------------AATAGCACCT-CC-AA-A-A--------A----------------GCA----TC--GT--CACC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                            9977 24 +     13100 -------------------------------------------------------------------------------------------------------ACACCT-GC-AG-G-A--------A----------------GCA----AA--GT--TGCC
i Perodicticus_ibeanus.k141_855320                       I 14 C 0
s Perodicticus_potto.k141_1092580                             8383 24 +     25941 -------------------------------------------------------------------------------------------------------ACACCT-GC-AG-G-A--------A----------------GCA----AA--GT--TGCC
i Perodicticus_potto.k141_1092580                        I 14 C 0
s Peromyscus_maniculatus.KI615324.1                       18194606 43 -  18517816 -----------------------------------T----------------------------G----T-T--AACA-TG-A----------------TGCTGCACCT-TC-AG-A-A--------A----------------GCCTCCATC--CT--TGTC
i Peromyscus_maniculatus.KI615324.1                      I 23 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     27933 38 -     29689 -----------------------------------T----------------------------C----T----AACA-CT-G----------------CACAAGAAGT-TC-AA-G-A--------A----------------GCA----CA--CT--GGCT
i Petromus_typicus.PetTyp_scaffold_42190                 I 1088 C 0
s Piliocolobus_badius.k141_1234363                           43360 61 +     62158 GTTAA-TGCT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATGT-A----------------CATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        38091 61 +     89929 GTTAA-TGCT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATGT-A----------------CATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            39507 61 +     51399 GTTAA-TGCT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATGT-A----------------CATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14295745 61 -  14605196 GTTAA-TGCT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATGT-A----------------CATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189130842 62 + 189387572 GTTAAGTGGT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TGTAGCACCT-CC-AA-A-A--------A----------------GCA----CA--GT--AAAC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570450 62 +   9816681 GTTAAGTGGT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TGTAGCACCT-CC-AA-A-A--------A----------------GCA----CA--GT--AAAC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               73029 61 -     81375 GTTAA-TGTT--CTTGC-----CC-TGAGG----CG----------------------------C----T----GGCATGT-A----------------TATAGCTCCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              4849 61 +     19060 GTTAA-TGTT--CTTGC-----CC-TGAGG----TG----------------------------C----T----GGCATGT-A----------------TATAGCTCCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 13049 63 -     22811 ATTCAAGGGT--CTTGG-----C-TAGAG------TC------T----G-T-------------C----T----AACA-TT-A----------------CACAGTACAC-CC-AG-A-A--------A----------------ACA----TA--AC--CACC
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2596548 61 -   4620579 GTGGAGTGGT--CTCGG-----CC-AGAGT----CG----------------------------C----T----AGCA-TT-A----------------CGTAGCACCC-CC-AG-G-A--------A----------------GCA----CA--GT--CACT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990529 61 +   2598838 GTGGAGTGGT--CTTGG-----CC-AGAGT----CT----------------------------C----T----AGCA-TT-A----------------CGTAGCACCC-CC-AG-G-A--------A----------------GCA----TA--GT--CACC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          28841 61 +     38485 GTGGAGTGGT--CTTGG-----CC-AGAGT----CT----------------------------C----T----AGCA-TT-A----------------CGTAGCACCC-CC-AG-G-A--------A----------------GCA----TA--GT--CACC
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                               884 61 -     13098 GTGGAGTGGT--CTTGG-----CC-AGAGT----CT----------------------------C----T----AGCA-TT-A----------------CGTAGCACCC-CC-AG-G-A--------A----------------GCA----TA--GT--CACC
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26362 61 +     35766 GTGGAGTGGT--CTTGG-----CC-AGAGT----CT----------------------------C----T----AGCA-TT-A----------------CGTAGCACCC-CC-AG-G-A--------A----------------GCA----TA--GT--CACC
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4549 61 -     24134 GTGGAGTGGT--CTTGG-----CC-AGAGT----CT----------------------------C----T----AGCA-TT-A----------------TGTAGCACCC-CC-AG-G-A--------A----------------GCA----TA--GT--CACC
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28374 61 -     67325 GTGGAGTGGT--CTTGG-----CC-AGAGT----CT----------------------------C----T----AGCA-TT-A----------------CGTAGCACCC-CC-AG-G-A--------A----------------GCA----TA--GT--CACC
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4597 61 -      6182 GTGGAGTGGT--CTTGG-----CC-AGAGT----CT----------------------------C----T----AGCA-TT-A----------------CGTAGCACCC-CC-AG-G-A--------A----------------GCA----TA--GT--CACC
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            10218 42 -     21651 -----------------------------------T----------------------------G----T----AATA-TG-A----------------GGCAATGTCT-TC-AG-A-A--------A----------------GCATCCATC--CT--CATT
i Psammomys_obesus.NESX01036370.1                        I 21 C 0
s Pteronotus_parnellii.KE909381.1                            14379 61 -     21811 GCTGA--GAC--CTTGG--C--C--AGAG------CC------TC-----T-------------C----T----AACA-TT-A----------------CACGGAGCCT-CC-AG-A-A--------A----------------GCA----TC--GT--TCTT
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39938 49 +     42204 GTTCAGCAGC--CTTGG--C--C--AAAG------TC------T--------------------C----T----AACT-TT-A----------------CACAGCACAT-CA-AA-A-A--------------------------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 11
s Pteropus_alecto.KB030862.1                              22976483 63 +  28871421 GTTCAGTGGT--CTTGG--C--C--AGAG------TC------TC-----T-------------C----T----AACG-TA-A----------------CACAGAACCT-CC-AG-A-A--------A----------------GCA----TC--AG--CACC
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1359569 63 +   4952924 GTTCAGTGGT--CTTGG--C--C--AGAG------TC------TC-----T-------------C----T----AACG-TA-A----------------CACAGAACCT-CC-AG-A-A--------A----------------GCA----TC--AG--CACC
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20274033 61 -  38429054 ATTCAGGGGT--CTTGG--C--C--AGAG------T-------T------T-------------C----T----AACA-TT-C----------------AACAGCACCT-CC-GA-A-A--------A----------------GCA----TT--GT--CACC
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             14858 61 -     91421 GTTAC-TGTT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCGTGT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7608978 61 +   7812017 GTTAA-TGTT--CTTGC-----CT-TGAGG----CT----------------------------C----T----GGCGTGT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             14830 61 -     72585 GTTAA-TGTT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCGTGT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53570460 42 +  90668790 -----------------------------------G----------------------------A----C----AACA-TG-A----------------TGCAGTGCCT-TC-AG-A-A--------a----------------gcatccatc--tt--cctc
i Rattus_norvegicus.chr16                                I 22 C 0
s Rhinopithecus_bieti.k119_217274                             6544 61 -     11128 GTTAA-TGTG--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATGT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91235899 61 - 195417433 GTTAA-TGTG--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATGT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7671549 61 +   7961872 GTTAA-TGTG--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATGT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87504 63 -     96226 GTTCAGTGGT--CTTGG--C--C--AGAG------TC------TC-----T-------------C----T----AACA-TA-G----------------CACAGAACCT-CC-AG-A-A--------A----------------GTA----TT--AG--CACC
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               7863 61 -      8359 GTTACGTGGT--CTTGT-----CT-CGAGG----TT----------------------------C----T----GGCATTG-A----------------TACAGCACCT-CC-AA-A-A--------T-----------------CA----CA--GT--AAAC
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_imperator.k141_2524406                             1822 61 +      2197 GTTACGTGGT--CTTGT-----CT-CGAGG----TT----------------------------C----T----GGCATTG-A----------------TACAGCACCT-CC-AA-A-A--------T-----------------CA----CA--GT--AAAC
i Saguinus_imperator.k141_2524406                        C 0 C 0
s Saguinus_inustus.k141_699149                               13241 61 +     13640 GTTACGTGGT--CTTGT-----CC-CGAGG----TT----------------------------C----T----GGCATTG-A----------------TACAGCACCT-CC-AA-A-A--------T-----------------CA----CA--GC--AAAC
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               8110 61 +      8564 GTTACGTGGT--CTTGT-----CT-CGAGG----TT----------------------------C----T----GGCATTG-A----------------TACAGCACCT-CC-AA-A-A--------T-----------------CA----CA--GT--AAAC
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209468959 61 + 209938924 GTTACGTGGT--CTTGT-----CT-CGAGG----TT----------------------------C----T----GGCATTG-A----------------CACAGCACCT-CC-AA-A-A--------T-----------------CA----CA--GT--AAAC
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 7668 61 -      9399 GTTACGTGGT--CTTGT-----CT-CGAGG----TT----------------------------C----T----GGCATTG-A----------------TACAGCACCT-CC-AA-A-A--------T-----------------CA----CA--GT--AAAC
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119950577 61 - 121099817 GTTACGTGGT--CTTCT-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TACAGAACCT-CC-AG-A-A--------A-----------------CA----CA--GT--AAAC
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23033 61 +     46362 GTTACGTGGT--CTTCT-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TACAGAACCT-CC-AG-A-A--------A-----------------CA----CA--GT--AAAC
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               23128 61 +     45824 GTTACGTGGT--CTTCT-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TACAGAACCT-CC-AG-A-A--------A-----------------CA----CA--GT--AAAC
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             39756 61 -     64574 GTTACGTGGT--CTTCT-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TACAGAACCT-CC-AG-A-A--------A-----------------CA----CA--GT--AAAC
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               2762 61 -     23631 GTTACGTGGT--CTTCT-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TACAGAACCT-CC-AG-A-A--------A-----------------CA----CA--GT--AAAC
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 23024 61 -     61129 GTTACGTGGT--CTTCT-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TACAGAACCT-CC-AG-A-A--------A-----------------CA----CA--GT--AAAC
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420348 61 -   5703754 GTTACGTGGT--CTGGT-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TACAGAACCT-CC-AA-A-A--------A-----------------CA----CA--GT--AAAC
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          55389 61 -     80660 GTTACGTGGT--CTGGT-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TACAGAACCT-CC-AA-A-A--------A-----------------CA----CA--GT--AAAC
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    152871 63 -    313613 ACTCCACGGT--CTTAG--C--C--AGCA------TC------TCC------------------C----T----CATA-CT-A----------------CACAGAACCT-CC-AG-A-A--------A----------------GCA----TC--AT--CACA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          19369 61 -     19888 GTTAA-TGTT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATGT-A----------------TATAGCACCT-GT-GA-A-A--------A----------------GCA----GG--GT--AAAC
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26572 61 +     39453 GTTAA-TGTT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATGT-A----------------TATAGCACCT-GT-GA-A-A--------A----------------GCA----GG--GT--AAAC
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            7091 61 +     27826 GTTAA-TGTT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATGT-A----------------TATAGCACCT-GT-GA-A-A--------A----------------GCA----GG--GT--AACC
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             6612 61 -     19483 GTTAA-TGTT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATGT-A----------------TATAGCACCT-GT-GA-A-A--------A----------------GCA----GG--GT--AAAC
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      6680 61 +      7198 GTTAA-TGTT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATGT-A----------------TATAGCACCT-GT-GA-A-A--------A----------------GCA----GG--GT--AAAC
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         14938 61 +     15514 GTTAA-TGTT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATGT-A----------------TATAGCACCT-GT-GA-A-A--------A----------------GCA----GG--GT--AAAC
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11717 42 -     12148 -----------------------------------T----------------------------G----T----TAGA-TG-C----------------TGTAGCACCT-TA-AA-A-A--------A----------------GTATCCATC--AC--CATC
i Sigmodon_hispidus.SigHis_scaffold_60841                I 23 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               3496 58 +   1910179 GGTTAGTGAT--TGCAG-----C--AGAA------T----------------------------T----T----AACA-TT-A----------------CACAGACCTT-CC-AG-A-A--------A----------------GAA----TC--AT--CATG
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13650734 63 -  18376816 -ATCAGTGATCTTAGAGA----C--AGAA------T----------------------------TGCTCA----AACA-TT-G----------------CACAGAATCT-CC-AA-C-T--------A----------------CTG----CC--CT--TAC-
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1953727 29 -   3870691 ----------------------------------------------------------------------------------A----------------CATAGAACCT-TC-AG-A-A--------A----------------GTA----TA--AT--CAGC
i Spermophilus_dauricus.KZ294078.1                       I 1 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30443 61 +     97271 GTTCAGTGGT--CTTGG--C--C--AAAG------TC------T--------------------C----T----AACA-TT-A----------------CACAGCACCT-CC-AA-A-A--------A----------------GCA----TC--AT--CACC
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              18023 61 -    196729 ATTCAGCGGT--CTTGG--C--C--AGAG------T-------T------T-------------C----T----AACA-TT-C----------------AACAGCACCT-CC-AA-A-A--------A----------------ACA----TC--AT--CACC
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6810197 63 +  69701581 gctcagtagt--CTTGG--C--C--ACAG------T----------------------------C----TCTCCAACA-CT-G----------------CACAGAACCT-CC-AG-A-A--------A----------------ACA----TC--AT--CACC
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1093154 38 -   1523678 GTTAAGTGGT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATA------------------------------------------------------------
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                10194 51 +     41958 GTTTAGTGGT--CTTGG--C--C--AGAG------TC------TC-----T-------------A----T----AACA-TT-A----------------CATGAAACCT-CC-AT-A-A--------------------------------------------
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 313
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72312 85 +    116680 GC-AAGGGGT--CTGGG-----C-TA-AG------TCCACAGATCCAAGCTGTGGACTTGGATCA----C----AGCA-TC-A----------------CGCAGCAGC--CC-AA-A-AA-------A----------------CCA----AA--AT--CAGC
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118454 63 -    156842 GTTTGGTGGT--TTTGG--C--C--AGGG-TCTC-T----------------------------C----T----AACA-TC-A----------------CACAGAACCT-CC-AG-A-A--------A----------------GCA----TC--AT--CACC
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    386911 63 +    539355 GTTCAGTGGT--TTTGG--C--C--AGGG-TCTC-T----------------------------C----T----AACA-TC-A----------------CACAGAACCT-CC-AT-A-A--------A----------------GCA----TC--AT--CACC
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               26132 57 +     70052 ----AATAGT--CCTGG-----CC-TGTCA----CT----------------------------C----T----AATGCTT-A----------------CACAGCACGG-CC-AG-A-A--------A----------------GCA----TG--GT---CAC
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                 965 57 -     16117 ----AGTAGT--CCTGG-----CC-TGTCA----CT----------------------------C----T----AATGCTT-A----------------CACAGCACGG-CC-AG-A-A--------A----------------GCA----TG--GT---CAC
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428269 61 + 186847797 GTTAA-TGCT--GTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATTT-A----------------TATAGCACCT-GC-AA-A-A--------A----------------GCA----GG--GT--AAAC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105235 38 +    114563 -----------------------------------T----------------------------C----T----AACA-CT-G----------------CACAACAAGC-TC-GG-G-A--------A----------------GCA----TT--GT--GGCT
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 1282 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   6137 62 +      8208 GCTACGTGGT--CCTGG-----C-TGTGC------TC------TC-----T-------------C----T----AGCA-TC-A----------------CACAGCACC--CC-AG-A-A--------G----------------ACA----CA--AT--CACC
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     80630 63 +    610378 GCACAGTGAT--CTTGG--C--C--AGAG------TC------T--A---T-------------C----T----AACA-TT-A----------------CATGGAACCT-CC-AG-A-A--------A----------------GTA----CC--AC--CCTC
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         10663 61 -     20410 GTTAA-TGTT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATGT-A----------------TATAGCACCT-GT-GA-A-A--------A----------------GCA----GG--GT--AAAC
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    14857 61 +     15221 GTTAA-TGTT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATGT-A----------------TATAGCACCT-GT-GA-A-A--------A----------------GCA----GG--GT--AAAC
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                       10764 61 +     19930 GTTAA-TGTT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATGT-A----------------TATAGCACCT-GT-GA-A-A--------A----------------GCA----GG--GT--AAAC
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       7191 61 -     19997 GTTAA-TGTT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATGT-A----------------TATAGCACCT-GT-GA-A-A--------A----------------GCA----GG--GT--AAAC
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            47315 61 -     60166 GTTAG-TGTT--CTTGC-----CC-TGCGG----CT----------------------------C----T----GGCATGT-A----------------TATAGCACCT-GT-GA-A-A--------A----------------GCA----GG--GT--AAAC
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        14786 61 -     27529 GTTAA-TGTT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATGT-A----------------TATAGCACCT-GT-GA-A-A--------A----------------GCA----GG--GT--AAAC
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     14730 61 -     18194 GTTAA-TGTT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATGT-A----------------TATAGCACCT-GT-GA-A-A--------A----------------GCA----GG--GT--AAAC
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           8458 61 -     21137 GTTAA-TGTT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATGT-A----------------TATAGCACCT-GT-GA-A-A--------A----------------GCA----GG--GT--AAAC
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    7161 61 -     10723 GTTAA-TGTT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATGT-A----------------TATAGCACCT-GT-GA-A-A--------A----------------GCA----GG--GT--AAAC
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         6317 61 +      9834 GTTAA-TGTT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATGT-A----------------TATAGCACCT-GT-GA-A-A--------A----------------GCA----GG--GT--AAAC
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        24630 61 +     32220 GTTAA-TGTT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATGT-A----------------TATAGCACCT-GT-GA-A-A--------A----------------GCA----GG--GT--AAAC
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5938732 61 +   6242583 GTTAA-TGTT--CTTGC-----CC-TGAGG----CT----------------------------C----T----GGCATGT-A----------------TATAGCACCT-GT-GA-A-A--------A----------------GCA----GG--GT--AAAC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        7984 61 +     20839 GTTAA-TGTT--CTTGC-----CC-TGCGG----CT----------------------------C----T----GGCATGT-A----------------TATAGCACCT-GT-GA-A-A--------A----------------GCA----GG--GT--AAAC
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4292987 36 +  10818551 ---------------------------------------------------------------------T----AACA-CG-A----------------CACAGCACCC-CC-AG-A-A--------A----------------GCA----TC--AT--CACC
i Trichechus_manatus.JH594705.1                          I 23 C 0
s Tupaia_chinensis.KB320699.1                              2155397 30 +   4065304 GTTAAGTGGT--CTTGG-----CC-AGAGAGC--CT----------------------------C----T----GG---------------------------------------------------------------------------------------
i Tupaia_chinensis.KB320699.1                            C 0 I 28
s Tupaia_tana.TupTan_flattened_line_97126                     9048 30 -     10553 GTTAAGTGGT--CTTGG-----CC-AGAGTGC--CT----------------------------C----T----AG---------------------------------------------------------------------------------------
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 28
s Uropsilus_gracilis.UroGra_scaffold_12083                   53028 63 -     77625 ACTGAATGCT--CTTAA--C--C--AGAG------TC------TCC------------------T----T----CACG-TT-A----------------CACAGAAGAT-CC-AA-A-T--------A----------------GCA----TC--AT--CACT
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4850143 61 -   5085361 GTTCAGTGGT--CTTGG--C--C--AAAG------TC------T--------------------C----T----AATA-TT-A----------------CACAGCAGCA-CC-AA-A-A--------A----------------TCA----TC--AT--AACC
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  11208 61 +     50397 GTGGAGTGGT--CTCGG-----CC-AGAGT----CG----------------------------C----T----AGCA-TT-A----------------CGTAGCACCC-CC-AG-G-A--------A----------------GCA----TA--GT--CACC
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11267 61 +     24756 GTGGAGTGGT--CTCGG-----CC-AGAGT----CG----------------------------C----T----AGCA-TT-A----------------CGTAGCACCC-CC-AG-G-A--------A----------------GCA----TA--GT--CACC
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371575 63 -   5488506 GTTCAGTGGT--CTTGG----TC--AGAG------T----------------------------C----TCTCCAACA-TT-G----------------CGCAAGACCT-CC-AG-A-A--------A----------------GCA----TC--AT--CACC
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10508 43 -     43706 --------------------------AAG------TC------T--------------------C----T----GACA-CT-A----------------CACAGCACCT-CC-AA-A-A--------A----------------GCA----TC--AT--CGCC
i Vulpes_lagopus.VulLag_flattened_line_30954             I 12 C 0
s Xerus_inauris.XerIna_scaffold_2302                           856 31 +    224448 -------------------------------------------------------------------------------AC-A----------------CATAGAACTT-TC-AG-A-A--------A----------------GCA----TA--AT--CAGC
i Xerus_inauris.XerIna_scaffold_2302                     I 1 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          5067 61 +     86975 GTTCAGTGGT--CTTGG--C--C--AAAG------TC------T--------------------C----T----AACA-TT-A----------------CACAGCACCT-CC-AA-A-C--------G----------------GCA----TC--AT--CACC
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      14742 33 +     63895 ---------------------------------------------------------------------------ACA-AT-A----------------CGCAACACAC-TC-TG-A-A--------C----------------ACA----CG--TT---CTC
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 24 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             1507 165 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Ochotona_princeps.JH802162.1                             1363382  0 +   3988456 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50341  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352  0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Colobus_guereza.LG01                                   199948958  0 + 200372422 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6514 3 +     62944 C-T-T
s Acinonyx_jubatus.LLWD01001279.1                           827087 3 -   1699592 C-T-T
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 18
s Acomys_cahirinus.AcoCah_scaffold_12655                     70684 3 +     87051 C-T-A
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510343 3 -  29979442 C-T-T
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             79113 3 -    347723 C-T-T
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     74384 3 -     89534 C-T-T
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14445 3 -     52922 C-T-T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         14381 3 -     28001 C-T-T
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          4877 3 -     18505 C-T-T
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           5731 3 -     12518 C-T-T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              7195 3 +     51355 C-T-T
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                 317 3 -     36483 C-T-T
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_743489                               3383 3 -     45847 C-T-T
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                24593 3 +     25266 C-T-T
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_918386                             318 3 -      9457 C-T-T
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_3472759                            17889 3 -     18578 C-T-T
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              3288 3 +     47717 C-T-T
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             3388 3 -      3544 C-T-T
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             14612 3 +     50774 C-T-T
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184834 3 +    412891 C-T-C
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  15230 3 -     33861 C-G-T
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            15250 3 -     34016 C-G-T
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297647 3 -   5030052 C-G-T
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             15252 3 -     34685 C-G-T
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28376 3 -     47192 C-G-T
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      12436 3 +     20879 C-T-A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       11365 3 +     14667 C-T-T
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4240 3 +     43469 C-T-C
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  53546 3 -     92717 C-T-T
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54173 3 +     85213 C-T-T
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             4985 3 -     10423 C-T-T
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             24457 3 +     31915 C-T-T
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            4951 3 +      5267 C-T-T
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590165 3 - 189096842 C-T-T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             11696 3 -     12001 C-T-T
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002135 3 -  17673402 C-T-T
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334593 3 -   7040546 C-T-T
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  402876 3 -   1652518 C-T-T
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17798936 3 -  60362399 C-T-T
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184993 3 -    185531 C-T-T
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034379 3 -   9314153 C-T-T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17958644 3 -  59632846 C-T-T
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18500156 3 +  63665305 C-T-T
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                     885 3 -     12242 C-T-T
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007247396.1                           201181 3 +    308752 C-T-T
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                4603 3 -     11696 C-T-C
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    136934 3 +    179628 C-A-T
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 12
s Catagonus_wagneri.CatWag_scaffold_2839                     92766 3 +    217609 C-T-T
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          9610 3 -     11392 C-T-T
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               5708 3 -      7577 C-T-T
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25651738 3 +  26074798 C-T-T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_398305                                 1314 3 +      1777 C-T-T
i Cebus_olivaceus.k141_398305                            C 0 C 0
s Cebus_unicolor.k141_544048                                 49651 3 -     74725 C-T-T
i Cebus_unicolor.k141_544048                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         5187 3 +     31688 C-T-T
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12231192 3 +  27778364 C-T-T
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2219 3 -     25243 C-T-T
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4475390 3 +   4669795 C-T-T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        13935 3 -     19203 C-T-T
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3342297                            551 3 -     14043 C-T-T
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           8587 3 +     27781 C-T-T
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         8752 3 -     20310 C-T-T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          11731 3 +     29689 C-T-T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            6485 3 -     20078 C-T-T
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          14408 3 -     27936 C-T-T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            3273 3 -     17152 C-T-T
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38816811 3 +  39242232 C-T-T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222503 3 -  21565898 C-T-T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       39621 3 -     53127 C-T-T
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        6890 3 +      7159 C-T-T
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14422 3 -     27947 C-T-T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         14397 3 +     17596 C-T-T
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                           444 3 +     14005 C-T-T
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             298 3 -      8501 CTC--
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             20925 3 -     52598 C-G-T
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16290 3 +     57038 C-G-T
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1252634 3 +   2543920 C-T-T
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2813271                          10862 3 +     11226 C-C-T
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18428381 3 -  18827391 C-T-T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       14818 3 -     50209 C-T-T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135421818 3 + 135778131 C-T-T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 18077 1 +     19366 C----
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 I 1
s Choloepus_hoffmanni.KN194906.1                            173153 1 +    839153 C----
i Choloepus_hoffmanni.KN194906.1                         I 1 I 1
s Colobus_angolensis.KN981557.1                            1910323 3 +   2368649 C-T-T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_polykomos.k141_906115                              36861 3 +     84244 C-T-T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17547860 3 -  53390261 T-T-C
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14177 3 -     20389 C-T-T
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 49948 3 +     63868 A-T-G
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11667442 3 + 224834208 C-T-G
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28250 3 -     87169 C-T-T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    836936 3 +   1526836 T-T-T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35585 3 +     51376 C-T-T
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            63307 1 +   2246927 --C--
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537154 3 -  12879189 C-T-T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8629618 3 +  20541912 C-T-C
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673043 3 +   1390856 C-T-T
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    5795 3 +    198055 C-T-T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36227 3 +     67921 C-T-T
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Echinops_telfairi.JH980293.1                            48780178 1 + 111700974 C----
i Echinops_telfairi.JH980293.1                           C 0 I 1
s Eidolon_helvum.KE759718.1                                  10287 3 +     11740 C-T-T
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          20175 3 -    110024 C-T-G
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                             306 3 +      8657 C-T-G
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16329084 3 -  41312741 C-T-T
i Enhydra_lutris.KZ291758.1                              I 11 C 0
s Eptesicus_fuscus.JH977646.1                              2145479 3 -  14770903 C-T-T
i Eptesicus_fuscus.JH977646.1                            I 7 C 0
s Equus_asinus.JREZ01000139.1                              1283311 3 +   4378816 C-T-T
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18531132 3 -  39960074 C-T-T
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               33160 3 +    498745 C-T-T
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3328028 3 -   7059049 t-t-t
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21204988 3 -  21539334 T-T-T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13650 3 -     14127 C-T-T
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6353 3 -     16928 C-T-T
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15377 3 -     25546 C-T-T
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12581 3 +     26330 C-T-T
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 13816 3 +     23973 C-T-T
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12578 3 +     75513 C-T-T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10508 3 +     97555 C-T-T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            13440 3 +     26496 C-T-T
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4052 3 -     17153 C-T-T
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13625 3 +    111500 C-T-T
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20236738 3 + 206538554 C-T-T
i Felis_catus.CM001381.2                                 C 0 I 18
s Felis_catus_fca126.CM031415.1                           20195581 3 + 205367284 C-T-T
i Felis_catus_fca126.CM031415.1                          C 0 I 18
s Felis_nigripes.FelNig_flattened_line_20823                  9095 3 -     36744 C-T-T
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 252
s Fukomys_damarensis.KN121974.1                             849208 4 +   3816255 C-TTT
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg2040                                     426499 3 -    453645 C-T-T
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4190 3 +     11339 C-T-T
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            1503 3 +     41679 C-T-T
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840                989 3 -      9135 C-T-G
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              15769 3 -     32273 C-T-T
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186337915 3 + 186649187 C-T-T
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6688 3 -     19426 C-T-T
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             11837 3 -     15286 C-T-T
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13476 3 +     18253 C-T-T
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13577 3 -     41752 C-T-T
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13414 3 -     16460 C-T-T
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242084 3 +    327341 C-T-T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20662057 3 +  22651954 C-T-T
i Heterocephalus_glaber.JH602082.1                       C 0 I 12
s Heterohyrax_brucei.HetBruBak_scaffold_122365                 657 3 +      7595 C-T-G
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hoolock_leuconedys.ctg274                                    434581 3 +    630532 c-t-t
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  44778 3 +     55795 C-T-T
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      82768 3 +    135385 T-T-T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7520705 3 -   7955117 C-A-T
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   22367 3 +     31101 C-G-T
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8276683 3 -   9596543 C-T-T
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    13895 3 -     42476 C-T-T
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15523929 3 -  30322482 C-T-T
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7247 3 +     64341 C-T-T
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           4570 3 +      4941 C-T-T
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        7288 3 +     35603 C-T-T
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    28759 3 +     38576 C-T-T
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         25456 3 +     66356 C-T-T
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         10827 3 -     23766 C-T-T
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             28888 3 +     45836 C-T-T
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1424 3 +     25010 C-T-T
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      26824 3 +     54090 C-T-T
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3042608 3 +   3914936 C-T-T
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6260 3 -     14121 T-T-T
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1436937 3 +   1826925 C-T-T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5747 3 +     11245 C-A-T
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004567 3 +   6120653 C-A-T
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4217085 3 -  43346337 T-C-G
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17954884 3 -  59628241 C-T-T
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               6747 3 +     40492 C-T-T
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59676006 3 +  60120075 C-T-T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 12519 3 -     26193 C-T-T
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            80303 3 -    114318 C-T-T
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  5994 3 -     23192 C-T-T
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                15463 3 -     29190 C-T-T
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  24028 3 +     37952 C-T-T
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186839117 3 + 187317192 C-T-T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25457680 3 -  25927173 C-T-T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  79876 3 +     89720 C-T-T
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 6877 3 +     20474 C-T-T
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   6677 3 -     14993 C-T-T
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  329543 3 -    668171 C-T-T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 4993 3 -     24072 C-T-T
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               25615 3 -     45290 C-T-T
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90386 3 +     94391 C-T-T
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23937210 3 -  24302211 C-T-T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               351338 3 +    752769 C-T-T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33102886 3 -  40650429 C-A-T
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        10095 3 -    207569 C-T-T
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              9808 3 +     13704 C-T-T
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 32623 3 +    140813 C-T-G
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12182120 3 -  29670104 C-T-G
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                5525 3 -      7380 C-T-T
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               4598 3 +     18990 C-T-T
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      5537 3 -      7356 C-T-T
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18291349 3 -  93316391 C-T-T
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    21917 1 -    145209 C----
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 1
s Micronycteris_hirsuta.MicHir_scaffold_52381                15155 1 -     19307 C----
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11260354 3 -  27267610 C-T-G
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850393 3 +   8254450 C-T-T
i Miniopterus_natalensis.LDJU01000034.1                  I 3 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34070 3 +     64694 C-T-T
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 3 C 0
s Miopithecus_ogouensis.k141_534055                           8935 3 -     28506 C-T-T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         5476 3 -      8324 C-T-T
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      8894 3 -     37649 C-T-T
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141101 3 -    366855 C-T-C
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35183 3 +     37127 C-T-T
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           6574 3 +     14753 C-T-T
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84361236 3 - 120012414 C-T-T
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87650234 3 - 129401213 C-T-T
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31354893 3 -  89631738 C-T-G
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90752295 3 - 130317789 C-T-T
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               300999 3 -  14710649 c-T-T
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71072 3 -     80779 C-T-T
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                280219 3 -  10118263 C-T-T
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1587487 3 -   6019432 C-T-T
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3903573 3 -   4330536 C-T-T
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_482318                         247 3 -       721 C-T-T
i Myotis_myotis.MyoMyo_scaffold_482318                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189027 3 +    196477 C-T-C
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2033933 3 -   3037898 C-T-T
i Nannospalax_galili.KL204047.1                          C 0 I 28
s Nasalis_larvatus.k141_413338                               14910 3 +     21681 C-T-T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306730 3 +  31847680 C-T-T
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149138 3 -   9404916 C-T-T
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102579539 3 - 196305487 C-T-T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_771082                              1384 3 -      2667 C-T-T
i Nycticebus_coucang.k141_771082                         C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749967 3 + 199412804 C-T-T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Octodon_degus.JH651603.1                                  746667 3 +  11899542 N-N-N
i Octodon_degus.JH651603.1                               C 0 I 12
s Odobenus_rosmarus.KB229312.1                              506415 3 -   2017862 C-T-T
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   25022 3 +     28053 C-T-G
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    80023 3 +    102263 C-T-G
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9604 1 -     18566 C----
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 I 1
s Oryctolagus_cuniculus.CM000791.1                        67147140 3 + 174332312 C-T-T
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462106 3 -    559221 C-T-T
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4031 3 +      8798 C-T-T
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696194 3 -   1103335 C-T-T
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    43862 3 +     80009 C-T-T
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189142770 3 + 189151597 C-T-T
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  150940 3 +    230217 C-T-T
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 4
s Panthera_pardus.KV860321.1                                264146 3 +  18783137 C-T-T
i Panthera_pardus.KV860321.1                             C 0 I 4
s Panthera_tigris.KE722367.1                               4721025 3 -   8748460 C-T-T
i Panthera_tigris.KE722367.1                             C 0 I 4
s Papio_anubis.CM001495.2                                183442960 3 + 183742232 C-T-T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             6658 3 +     20448 C-T-T
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563466 3 +  20919399 C-T-T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   5402 3 +     41871 C-T-T
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     8687 3 +     27711 C-T-T
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  8768 3 +      9205 C-T-T
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12417 3 -     78924 C-T-T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10001 3 +     13100 C-T-T
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8407 3 +     25941 C-T-T
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18194649 3 -  18517816 C-T-G
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     27971 3 -     29689 C-T-A
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Piliocolobus_badius.k141_1234363                           43421 3 +     62158 C-T-T
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        38152 3 +     89929 C-T-T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            39568 3 +     51399 C-T-T
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14295806 3 -  14605196 C-T-T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189130904 3 + 189387572 C-T-T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570512 3 +   9816681 C-T-T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               73090 3 -     81375 C-T-T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              4910 3 +     19060 C-T-T
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 13112 3 -     22811 C-T-G
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2596609 3 -   4620579 C-T-T
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990590 3 +   2598838 C-T-T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          28902 3 +     38485 C-T-T
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                               945 3 -     13098 C-T-T
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26423 3 +     35766 C-T-T
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4610 3 -     24134 C-T-T
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28435 3 -     67325 C-T-T
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4658 3 -      6182 C-T-T
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            10260 3 -     21651 C-T-G
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            14440 3 -     21811 C-T-C
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         39998 3 +     42204 C-T-T
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 11 C 0
s Pteropus_alecto.KB030862.1                              22976546 3 +  28871421 C-T-T
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1359632 3 +   4952924 C-T-T
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20274094 3 -  38429054 C-T-T
i Puma_concolor.QAVW01001104.1                           C 0 I 18
s Pygathrix_cinerea.k141_1153803                             14919 3 -     91421 C-T-T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7609039 3 +   7812017 C-T-T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             14891 3 -     72585 C-T-T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53570502 3 +  90668790 c-t-a
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             6605 3 -     11128 C-T-T
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91235960 3 - 195417433 C-T-T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7671610 3 +   7961872 C-T-T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87567 3 -     96226 C-T-T
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               7924 3 -      8359 C-C-T
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_imperator.k141_2524406                             1883 3 +      2197 C-C-T
i Saguinus_imperator.k141_2524406                        C 0 C 0
s Saguinus_inustus.k141_699149                               13302 3 +     13640 C-C-T
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               8171 3 +      8564 C-C-T
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469020 3 + 209938924 C-C-T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 7729 3 -      9399 C-C-T
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119950638 3 - 121099817 C-T-T
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23094 3 +     46362 C-T-T
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               23189 3 +     45824 C-T-T
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             39817 3 -     64574 C-T-T
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               2823 3 -     23631 C-T-T
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 23085 3 -     61129 C-T-T
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420409 3 -   5703754 C-T-T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          55450 3 -     80660 C-T-T
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    152934 3 -    313613 T-T-T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          19430 3 -     19888 C-T-T
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26633 3 +     39453 C-T-T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            7152 3 +     27826 C-T-T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             6673 3 -     19483 C-T-T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      6741 3 +      7198 C-T-T
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         14999 3 +     15514 C-T-T
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11759 3 -     12148 C-T-G
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               3554 3 +   1910179 C-C-T
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1953756 3 -   3870691 C-A-T
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30504 3 +     97271 A-T-T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              18084 3 -    196729 C-T-T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6810260 3 +  69701581 A-T-T
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                10558 3 +     41958 C-T-T
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 313 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72397 3 +    116680 C-T-C
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118517 3 -    156842 C-T-T
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    386974 3 +    539355 C-T-T
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               26189 3 +     70052 C-T-T
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1022 3 -     16117 C-T-T
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428330 3 + 186847797 C-T-T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105273 3 +    114563 C-T-T
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   6199 3 +      8208 CTC--
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     80693 3 +    610378 C-T-C
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         10724 3 -     20410 C-T-T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    14918 3 +     15221 C-T-T
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                       10825 3 +     19930 C-T-T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       7252 3 -     19997 C-T-T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            47376 3 -     60166 C-T-T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        14847 3 -     27529 C-T-T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     14791 3 -     18194 C-T-T
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           8519 3 -     21137 C-T-T
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    7222 3 -     10723 C-T-T
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         6378 3 +      9834 C-T-T
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        24691 3 +     32220 C-T-T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5938793 3 +   6242583 C-T-T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        8045 3 +     20839 C-T-T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4293023 3 +  10818551 C-T-G
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2155455 3 +   4065304 C-T-T
i Tupaia_chinensis.KB320699.1                            I 28 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9106 3 -     10553 C-T-T
i Tupaia_tana.TupTan_flattened_line_97126                I 28 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   53091 3 -     77625 T-T-T
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 20
s Ursus_maritimus.KK499267.1                               4850204 3 -   5085361 C-T-T
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  11269 3 +     50397 C-T-T
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11328 3 +     24756 C-T-T
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371638 3 -   5488506 C-T-T
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10551 3 -     43706 C-T-T
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                           887 3 +    224448 C-A-T
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          5128 3 +     86975 C-T-T
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      14775 3 +     63895 C-T-T
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 22
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sorex_araneus.JH798187.1                                13650797 0 -  18376816 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             1507 165 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Ochotona_princeps.JH802162.1                             1363382 0 +   3988456 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50341 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352 0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Elephantulus_edwardii.JH947257.1                         1097481 0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Crocidura_indochinensis.CroInd_scaffold_37019               2752 0 -     19598 C
e Colobus_guereza.LG01                                   199948958 0 + 200372422 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6517 31 +     62944 TAGGA----------G--T-TACAA----------TTCAT--------TTGATACA-----------AATTCT
s Acinonyx_jubatus.LLWD01001279.1                           827108  8 -   1699592 ------------------------------------------------C------A-----------AGTTCT
i Acinonyx_jubatus.LLWD01001279.1                        I 18 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     70687 20 +     87051 TAGAATGTTCTTTCTA--G-AAC--------------------------------------------------
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 21
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510346 33 -  29979442 TAGAA----------G--T-AAC--ATATTTA-A-----TTT-GATG-C------A-----------AGTTCT
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             79116 33 -    347723 TAGAA----------G--T-AAC--ATATTTA-G-----TTT-GATA-A------A-----------ATTTCT
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     74387 10 -     89534 TAGAA----------G--T-AAC--------------------------------------------------
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 17
s Allenopithecus_nigroviridis.k141_3361533                   14448 31 -     52922 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         14384 31 -     28001 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          4880 31 -     18505 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           5734 31 -     12518 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              7198 31 +     51355 CATGA----------G--T-CACAA----------TTCAT--------TTGATGCA-----------AATCCT
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                 320 31 -     36483 CATGA----------G--T-CACAA----------TTCAT--------TTGATGCA-----------AATCCT
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_743489                               3386 31 -     45847 CATGA----------G--T-CACAA----------TTCAT--------TTGATGCA-----------AATCCT
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                24596 31 +     25266 CATGA----------G--T-CACAA----------TTCAT--------TTGATGCA-----------AATCCT
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_918386                             321 31 -      9457 CATGA----------A--T-CACAA----------TTCAT--------TTGATGCA-----------AATCCT
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_3472759                            17892 31 -     18578 CATGA----------G--T-CACAA----------TTCAT--------TTGATGCA-----------AATCCT
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              3291 31 +     47717 CATGA----------G--T-CACAA----------TTCAT--------TTGATGCA-----------AATCCT
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             3391 31 -      3544 CATGA----------G--T-CACAA----------TTCAT--------TTGATGCA-----------GATCCT
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             14615 31 +     50774 CATGA----------G--T-CACAA----------TTCAT--------TTGATGCA-----------AATCCT
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184837 33 +    412891 CGGAA----------G--C-AAC--ATATTTA-------CTTTGACA-C------A-----------AATTCC
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  15233 31 -     33861 CATGA----------G--T-CACAA----------TTCAT--------TTGATGCA-----------AATCCT
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            15253 31 -     34016 CATGA----------G--T-CACAA----------TTCAT--------TTGATGCA-----------AATCCT
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297650 31 -   5030052 CATGA----------G--T-CACAA----------TTCAT--------TTGATGCA-----------AATCCT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             15255 31 -     34685 CATGA----------G--T-CACAA----------TTCAT--------TTGATGCA-----------AATCCT
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28379 31 -     47192 CATGA----------G--T-CACAA----------TTCAT--------TTGATGCA-----------AATCCT
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      12439 10 +     20879 TACAA----------G--C-AGC--------------------------------------------------
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 14
s Arctocebus_calabarensis.k141_2318572                       11368 13 +     14667 TAGAA----------G--T-CAC----------------C--------TT-----------------------
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4243 33 +     43469 CAGAA----------G--C-AAC--ATGTTTA-------CTTTGACA-C------A-----------AATTCC
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  53549 13 -     92717 TAGAA----------T--T-CAC----------------C--------TT-----------------------
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54176 13 +     85213 TAGAA----------T--T-CAC----------------C--------TT-----------------------
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             4988 31 -     10423 CACGA----------G--T-CACAG----------TTCAT--------TCGATGCA-----------AATCCT
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             24460 31 +     31915 CACGA----------G--T-CACAA----------TTCAT--------TTGATGCA-----------AACCCT
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            4954 31 +      5267 CACGA----------G--T-CACAG----------TTCAT--------TCGATGCA-----------AATCCT
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590168 31 - 189096842 CACGA----------G--T-CACAG----------TTCAT--------TCGATGCA-----------AATCCT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             11699 31 -     12001 CACGA----------G--T-CACAG----------TTCAT--------TCGATGCA-----------AATCCT
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002138 33 -  17673402 CAGAA----------T--C-AAT--CAATTTA-G-----CTT-GATG-T------A-----------AATTAC
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334596 33 -   7040546 CAGAA----------T--C-AAT--CAATTTA-G-----CTT-GATG-T------A-----------AATTAC
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  402879 33 -   1652518 CAGAA----------T--C-AAT--CAATTTA-G-----CTT-GATG-T------A-----------AATTAC
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17798939 33 -  60362399 TAGAA----------A--T-GAC--GTATTTA-G-----TTT-GATG-C------A-----------AGTTCT
i CanFam4.chr16                                          C 0 I 11
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    184996 33 -    185531 TAGAA----------A--T-GAC--GTATTTA-G-----TTT-GATG-C------A-----------AGTTCT
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 I 11
s Canis_lupus_dingo.QKWQ01000480.1                         9034382 33 -   9314153 TAGAA----------A--T-GAC--GTATTTA-G-----TTT-GATG-C------A-----------AGTTCT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 11
s Canis_lupus_familiaris.chr16                            17958647 33 -  59632846 TAGAA----------A--T-GAC--GTATTTA-G-----TTT-GATG-C------A-----------AGTTCT
i Canis_lupus_familiaris.chr16                           C 0 I 11
s Canis_lupus_orion.HG994398.1                            18500159 33 +  63665305 TAGAA----------A--T-GAC--GTATTTA-G-----TTT-GATG-C------A-----------AGTTCT
i Canis_lupus_orion.HG994398.1                           C 0 I 11
s Capromys_pilorides.CapPil_scaffold_65020                     888 10 -     12242 TAAAA----------G--T-AAT--------------------------------------------------
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 16
s Carlito_syrichta.NW_007247396.1                           201184 31 +    308752 GAGAA----------G--T-CACAG----------CTAGT--------TTGATACA-----------AATTCT
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                4606 33 -     11696 CGGAA----------G--C-AAC--ATATTTA-------CTTTGACA-C------A-----------AATTCC
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    136949 18 +    179628 -------------------------------------------------------TCAATTTGATGCAACTCT
i Castor_canadensis.CasCan_scaffold_2074                 I 12 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     92769 10 +    217609 TAGAA----------G--C-AAT--------------------------------------------------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 23
s Cebuella_niveiventris.k141_1251222                          9613 31 -     11392 CACGA----------G--T-CACAG----------TTCAT--------TCAATGCA-----------AATCCT
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               5711 31 -      7577 CACGA----------G--T-CACAG----------TTCAT--------TCGATGCA-----------AATCCT
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25651741 31 +  26074798 CAAGA----------G--T-CACAA----------TTCAT--------TTGATGCA-----------AATCCT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_398305                                 1317 31 +      1777 CAAGA----------G--T-CACAA----------TTCAT--------TTGATGCA-----------AATCCT
i Cebus_olivaceus.k141_398305                            C 0 C 0
s Cebus_unicolor.k141_544048                                 49654 31 -     74725 CAAGA----------G--T-CACAA----------TTCAT--------TTGATGCA-----------AATCCT
i Cebus_unicolor.k141_544048                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         5190 31 +     31688 GAGAA----------G--T-CACAG----------CTAGT--------TTGATACA-----------AATTCT
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12231195 33 +  27778364 TAGAA----------G--C-AAC--ATATTTA-G-----CTT-GACA-C------T-----------AATTCT
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2222 33 -     25243 TAGAA----------G--C-AAC--ATATTTA-G-----CTT-GACA-C------T-----------AATTCT
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4475393 31 +   4669795 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        13938 31 -     19203 TAAGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3342297                            554 31 -     14043 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           8590 31 +     27781 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         8755 31 -     20310 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          11734 31 +     29689 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            6488 31 -     20078 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          14411 31 -     27936 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            3276 30 -     17152 TAGGA----------A--T-TACAA----------TTAA---------TTGATACA-----------AATTCT
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38816814 31 +  39242232 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222506 31 -  21565898 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       39624 31 -     53127 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        6893 31 +      7159 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14425 31 -     27947 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         14400 31 +     17596 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                           447 31 +     14005 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             301 33 -      8501 TTGAA----------G--T-AAC--ATAGTTA-G-----TCT-GATG-C------A-----------AATCAT
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             20928 13 -     52598 TAGAA----------T--T-CAC----------------C--------TT-----------------------
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16293 13 +     57038 TAGAA----------T--T-CAC----------------C--------TT-----------------------
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1252637 10 +   2543920 TAGAA----------G--C-AAT--------------------------------------------------
i Chinchilla_lanigera.JH722012.1                         C 0 I 9
s Chiropotes_albinasus.k141_2813271                          10865 31 +     11226 CACGA----------G--C-CACAA----------CTTAT--------TTGATGCA-----------AATCCT
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18428384 31 -  18827391 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       14821 31 -     50209 TAGGA----------A--T-TACAA----------TTAAT--------TCGATACA-----------AATTCT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135421821 31 + 135778131 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 18079 33 +     19366 TAGAA----------G--T-AAC--ATATTTA-G-----TCT-GGTG-C------A-----------CATTCT
i Choloepus_didactylus.ChoDid_scaffold_45914             I 1 C 0
s Choloepus_hoffmanni.KN194906.1                            173155 33 +    839153 TAGAA----------G--T-AAC--ATATTTA-G-----TCT-GGTG-C------A-----------CATTCT
i Choloepus_hoffmanni.KN194906.1                         I 1 C 0
s Colobus_angolensis.KN981557.1                            1910326 31 +   2368649 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_polykomos.k141_906115                              36864 31 +     84244 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17547863 33 -  53390261 TAGAA----------G--T-AAC--ATATTTA-A-----CAT-GATG-C------A-----------AATTCT
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14180 33 -     20389 TAGAA----------G--C-AGC--AGATTTA-G-----TTT-GATA-C------A-----------GATTCT
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 49951 10 +     63868 TAGAA----------A--G-AAC--------------------------------------------------
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 21
s Cricetulus_griseus.LT883664.1                           11667445 20 + 224834208 TAGAAAGTTCTTTCTA--G-AAC--------------------------------------------------
i Cricetulus_griseus.LT883664.1                          C 0 I 21
s Crocidura_indochinensis.CroInd_scaffold_37019               2752 13 -     19598 ----A----------G--T-AGC--AT-TTTA-------T---------------------------------
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 I 7
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28253 33 -     87169 TAGAA----------G--T-AAC--ATATTTA-G-----TTT-GATG-T------G-----------AGTTCT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    836939 10 +   1526836 TAAAA----------G--T-AGG--------------------------------------------------
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 9
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35588 10 +     51376 TAAAA----------A--T-AAC--------------------------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 9
s Dasypus_novemcinctus.JH564415.1                            63308 33 +   2246927 TTGAA----------G--T-AAC--ATATTTA-G-----TCT-GATG-C------A-----------AATTAT
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537157 13 -  12879189 TAGAA----------G--G-CAC----------------C--------TT-----------------------
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8629621 33 +  20541912 TGGAA----------G--C-AAC--ATATCT--G-----CCTTGACA-C------A-----------AATTCC
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673046 33 +   1390856 CAGAA----------G--C-AAC--ATATTTA-G-----CTT-GACG-C------T-----------AATTCT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    5798 33 +    198055 TAGAA----------G--C-AAC--GTATTTA-G-----CTT-GACG-C------T-----------AATTCT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36230 10 +     67921 TAGAA----------G--T-AAT--------------------------------------------------
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 9
s Echinops_telfairi.JH980293.1                            48780180 33 + 111700974 GAGAA----------G--T-AGC--ACACT-A-AC----TTT-GGTG-C------A-----------GGTCCT
i Echinops_telfairi.JH980293.1                           I 1 C 0
s Eidolon_helvum.KE759718.1                                  10290 33 +     11740 TAGAA----------A--T-GAC--ATATTTA-G-----TTT-GATG-C------A-----------AATTCT
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1097481 33 +  10337057 TAGAA----------G--C-AAC--ATATTGA-A-----ATT-GATG-C------A-----------CATTCC
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          20178 20 -    110024 TAGAATGTTCTTTCTA--G-AAA--------------------------------------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 21
s Ellobius_talpinus.LOJH01081419.1                             309 20 +      8657 TAGAAAGTTCTTTCTA--G-AAA--------------------------------------------------
i Ellobius_talpinus.LOJH01081419.1                       C 0 I 21
s Enhydra_lutris.KZ291758.1                               16329087 33 -  41312741 TAGAA----------G--T-AAC--ATATTTA-A-----TTT-GATG-C------A-----------TGTTCT
i Enhydra_lutris.KZ291758.1                              C 0 I 3
s Eptesicus_fuscus.JH977646.1                              2145482 31 -  14770903 TAGAA----------G--C-AAT--GTAGTTA-------CT--GATG-C------A-----------AATTCT
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1283314 33 +   4378816 TAGAA----------G--C-AAT--GTATTTA-G-----TTT-GATG-C------A-----------AATTGT
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18531135 33 -  39960074 TAGAA----------G--C-AAT--GTATTTA-G-----TTT-GATG-C------A-----------AATTGT
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               33163 33 +    498745 TAGAA----------G--C-AAT--GTATTTA-G-----TTT-GATG-C------A-----------AATTGT
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3328031 32 -   7059049 taaaa--------cagtat-a-----T-T-CA-C-----TTT-GATG-C------A-----------AATTCT
i Erinaceus_europaeus.JH835339.1                         C 0 I 4
s Erythrocebus_patas.Contig38                             21204991 31 -  21539334 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13653 13 -     14127 TAGAG----------T--T-CAC----------------C--------TT-----------------------
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6356 13 -     16928 TAGAG----------T--T-CAC----------------C--------TT-----------------------
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15380 13 -     25546 TAGAG----------T--T-CAC----------------C--------TT-----------------------
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12584 13 +     26330 TAGAG----------T--T-CAC----------------C--------TT-----------------------
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 13819 13 +     23973 TAGAG----------T--T-CAC----------------C--------TT-----------------------
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12581 13 +     75513 TAGAG----------T--T-CAC----------------C--------TT-----------------------
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10511 13 +     97555 TAGAG----------T--T-CAC----------------C--------TT-----------------------
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            13443 13 +     26496 TAGAG----------T--T-CAC----------------C--------TT-----------------------
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4055 13 -     17153 TAGAG----------T--T-CAC----------------C--------TT-----------------------
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13628 13 +    111500 TAGAG----------T--T-CAC----------------C--------TT-----------------------
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20236759  8 + 206538554 ------------------------------------------------C------A-----------AGTTCT
i Felis_catus.CM001381.2                                 I 18 C 0
s Felis_catus_fca126.CM031415.1                           20195602  8 + 205367284 ------------------------------------------------C------A-----------AGTTCT
i Felis_catus_fca126.CM031415.1                          I 18 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  9350  8 -     36744 ------------------------------------------------C------A-----------AGTTCT
i Felis_nigripes.FelNig_flattened_line_20823             I 252 C 0
s Fukomys_damarensis.KN121974.1                             849212 10 +   3816255 TAAAA----------G--T-AAT--------------------------------------------------
i Fukomys_damarensis.KN121974.1                          C 0 I 9
s Galago_moholi.ctg2040                                     426502 13 -    453645 TAGAA----------G--T-CAC----------------C--------TT-----------------------
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4193 13 +     11339 TAGAA----------G--T-CAC----------------C--------TT-----------------------
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            1506 13 +     41679 TGGAA----------G--T-CAC----------------C--------TT-----------------------
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840                992 31 -      9135 TAGAT----------G--T-CAC--AT-TT-A-A-----T--------TTGATGCA-----------AATTCT
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              15772 31 -     32273 TAGGA----------G--T-TACAA----------TTCAT--------TTGATACA-----------AATTCT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186337918 31 + 186649187 TAGGA----------G--T-TACAA----------TTCAT--------TTGATACA-----------AATTCT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6691 13 -     19426 TAGAG----------T--T-CAC----------------C--------TT-----------------------
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             11840 13 -     15286 TAGAG----------T--T-CAC----------------C--------TT-----------------------
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13479 13 +     18253 TAGAG----------T--T-CAC----------------C--------TT-----------------------
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13580 13 -     41752 TAGAG----------T--T-CAC----------------C--------TT-----------------------
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13417 13 -     16460 TAGAG----------T--C-CAC----------------C--------TT-----------------------
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242087 33 +    327341 TAGAA----------G--T-AAT--ATATTTA-G-----TCT-GATG-T------G-----------AGTTCT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20662072  7 +  22651954 -------------------------------------------------------A-----------AATTCT
i Heterocephalus_glaber.JH602082.1                       I 12 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                 660 33 +      7595 TAGAA----------G--T-AAT--ATACTGA-G-----TTT-GATG-C------A-----------AATTCT
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hoolock_leuconedys.ctg274                                    434584 31 +    630532 tagGT----------G--T-TACAA----------TTCAT--------TTGATACA-----------AATTCT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  44781 33 +     55795 TAGAA----------G--C-AAC--ATAATTA-G-----TGT-G-CTGT------G-----------AGTTCT
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      82771 10 +    135385 TAGAA----------G--T-AAT--------------------------------------------------
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 9
s Ictidomys_tridecemlineatus.JH393364.1                    7520708 10 -   7955117 TAGAA----------G--C-AGC--------------------------------------------------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 13
s Indri_indri.k141_3655594                                   22370 13 +     31101 TAGAA----------T--T-CAC----------------C--------TT-----------------------
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8276686 10 -   9596543 TTGAA----------G--T-AAC--------------------------------------------------
i Jaculus_jaculus.JH725527.1                             C 0 I 27
s Lasiurus_borealis.LasBor_scaffold_32767                    13898 31 -     42476 TAGAA----------G--C-CAT--GTAGTTA-------CT--GATG-C------A-----------AATTCT
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15523932 13 -  30322482 CAGAG----------T--T-CAC----------------C--------TT-----------------------
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7250 31 +     64341 CCCGA----------G--C-CACAA----------CTCAT--------TTGATGCA-----------AATCCT
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           4573 31 +      4941 CCCGA----------G--C-CACAA----------CTCAT--------TTGATGCA-----------AATCCT
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        7291 31 +     35603 CCCGA----------G--C-CACAA----------CTCAT--------TTGATGCA-----------AATCCT
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    28762 31 +     38576 CATGA----------G--T-CACAA----------TTCAT--------TTGATGCA-----------AATCCT
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         25459 31 +     66356 CATGA----------G--T-CACAA----------TTCAT--------TTGATGCA-----------AATCCT
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         10830 13 -     23766 TAGAA----------T--T-CAC----------------C--------TT-----------------------
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             28891 13 +     45836 TAGAA----------T--T-CAC----------------C--------TT-----------------------
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1427 13 +     25010 TAGAA----------T--T-CAC----------------C--------TT-----------------------
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      26827 13 +     54090 TAGAA----------T--T-CAC----------------C--------TT-----------------------
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3042611 33 +   3914936 TATAA----------G--T-AAC--TTATTTA-G-----TTT-GATG-C------A-----------AGTTCT
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6263 25 -     14121 CAGAA----------G--TTAAC--ATGT--A-A-----T--------C------------------TGGTGT
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1436940 31 +   1826925 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5750 13 +     11245 TACAA----------G--T-CAC----------------C--------TT-----------------------
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004570 13 +   6120653 TACAA----------G--T-CAC----------------C--------TT-----------------------
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4217088 33 -  43346337 TAGAA----------G--T-AAT--ATATTGA-A-----TTT-GATG-C------A-----------AATTCT
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17954887 33 -  59628241 TAGAA----------A--T-GAC--GTATTTA-G-----TTT-GATG-C------A-----------AGTTCT
i Lycaon_pictus.CM007581.1                               C 0 I 11
s Macaca_arctoides.k141_2326796                               6750 31 +     40492 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59676009 31 +  60120075 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 12522 31 -     26193 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            80306 31 -    114318 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  5997 31 -     23192 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCC
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                15466 31 -     29190 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  24031 31 +     37952 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186839120 31 + 187317192 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25457683 31 -  25927173 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  79879 31 +     89720 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 6880 31 +     20474 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   6680 31 -     14993 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  329546 31 -    668171 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 4996 31 -     24072 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               25618 31 -     45290 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90389 33 +     94391 TAGAA----------A--C-GAC--ATATTTA-G-----TTT-GATG-C------A-----------AATTCT
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23937213 31 -  24302211 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               351341 31 +    752769 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33102889 10 -  40650429 TAGAA----------G--T-AGC--------------------------------------------------
i Marmota_marmota.CZRN01000018.1                         C 0 I 14
s Megaderma_lyra.MegLyr_scaffold_4542                        10098 33 -    207569 TAGAA----------G--C-AAC--ATATT-A-AG----TTT-GATG-C------A-----------AATTCC
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              9811 33 +     13704 TAGAG----------G--T-AAC--ATATTTA-A-----TTT-GATG-C------A-----------TGTTCT
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 32626 20 +    140813 TAGAATGTTCTTTCTA--G-AAC--------------------------------------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 29
s Mesocricetus_auratus.KB708134.1                         12182123 20 -  29670104 AAGGGAATTCCTCCTA--G-AAC--------------------------------------------------
i Mesocricetus_auratus.KB708134.1                        C 0 I 21
s Mico_argentatus.k141_1239457                                5528 31 -      7380 CACGA----------G--T-CACAG----------TTCAT--------TCGATGCA-----------AATCCT
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               4601 31 +     18990 CACGA----------G--T-CACAG----------TTCAT--------TCGATGCA-----------AATCCT
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      5540 31 -      7356 CACGA----------G--T-CACAG----------TTCAT--------TCGATGCA-----------AATCCT
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18291352 13 -  93316391 TAGAA----------T--T-CAC----------------C--------TT-----------------------
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    21919 32 -    145209 CAGAA----------G--T-AGC--ACACT-A-AC----TTT-GGTG-C------A-----------GAT-CT
i Microgale_talazaci.MicTal_scaffold_6613                I 1 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                15156 26 -     19307 --------------------AAC--ATATTTA-------CTTTGACA-C------A-----------AATTCC
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11260357 20 -  27267610 TAGAACATTCTTTCTA--G-AAC--------------------------------------------------
i Microtus_ochrogaster.CM001695.1                        C 0 I 21
s Miniopterus_natalensis.LDJU01000034.1                    1850396 32 +   8254450 GAGAA----------G--C-AAC--ATAGCTA-------CTCTG-CTGC------G------------GTTCC
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34073 32 +     64694 GAGAA----------G--C-AAC--ATAGCTA-------CTCTG-CTGC------G------------GTTCC
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           8938 31 -     28506 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         5479 33 -      8324 TATAA----------G--T-AAC--TTATTTA-G-----TTT-GATG-C------A-----------AGTTCT
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      8897 13 -     37649 TAGAA----------T--T-CAC----------------C--------TT-----------------------
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141104 33 -    366855 TAGAA----------G--C-TAC--ACATTTA-------CTTTGATG-C------A-----------AATTCC
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35186 33 +     37127 TAGAA----------G--T-AAT--ATATTTA-G-----TCT-GATG-T------G-----------AGTTCT
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           6577 31 +     14753 TAGAA----------G--C-AAT--GTAGTTA-------CT--GATG-C------A-----------AATTCT
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84361239 20 - 120012414 TAGAATATTCTTTCCA--G-ACC--------------------------------------------------
i Mus_caroli.LT608237.1                                  C 0 I 21
s Mus_musculus.chr8                                       87650237 20 - 129401213 TAGAATATTCTTtcca--g-acc--------------------------------------------------
i Mus_musculus.chr8                                      C 0 I 21
s Mus_pahari.LT608297.1                                   31354896 20 -  89631738 CAGAATACCCTTTCCA--G-ACC--------------------------------------------------
i Mus_pahari.LT608297.1                                  C 0 I 21
s Mus_spretus.CM004101.1                                  90752298 20 - 130317789 TAGAATATTCTTTCCA--G-ACC--------------------------------------------------
i Mus_spretus.CM004101.1                                 C 0 I 21
s Mustela_putorius.JH418006.1                               301002 33 -  14710649 TAGAA----------G--T-TAC--ATATTTA-A-----TTT-GATG-C------A-----------TGTTCT
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71075 10 -     80779 TAAAA----------A--T-GAC--------------------------------------------------
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 I 9
s Myotis_brandtii.KE162005.1                                280222 31 -  10118263 TAGAA----------G--C-AAT--GTAGTTA-------CT--GATG-C------A-----------AATTCT
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1587490 31 -   6019432 TAGAA----------G--C-AAT--ATAGTTA-------CT--GATG-C------A-----------AATTCT
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3903576 31 -   4330536 TAGAA----------G--C-AAT--GTCGTTA-------CT--GATG-A------A-----------AATTCT
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_482318                         250 31 -       721 TAGAA----------G--C-AAT--GTCGTTA-------CT--GATG-C------A-----------AATTCT
i Myotis_myotis.MyoMyo_scaffold_482318                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189030 33 +    196477 TGGAA----------G--T-AAC--AGATTTA-G-----A-CAGATG-C------A-----------CATTCT
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2033964  7 -   3037898 -------------------------------------------------------a-----------aattct
i Nannospalax_galili.KL204047.1                          I 28 C 0
s Nasalis_larvatus.k141_413338                               14913 31 +     21681 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306733 33 +  31847680 TATAA----------G--T-AAC--TTATTTA-G-----TTT-GATG-C------A-----------AGTTCT
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149141 33 -   9404916 TAGAA----------A--T-GAC--GTATTTA-G-----TTT-GATG-C------A-----------AGTTCT
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102579542 13 - 196305487 TAGAA----------G--T-TAC----------------A--------TT-----------------------
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_771082                              1387 13 -      2667 TAGAA----------G--T-TAC----------------A--------TT-----------------------
i Nycticebus_coucang.k141_771082                         C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749970 13 + 199412804 TAGAA----------G--T-TAC----------------A--------TT-----------------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Octodon_degus.JH651603.1                                  746682  7 +  11899542 -------------------------------------------------------A-----------AATGCT
i Octodon_degus.JH651603.1                               I 12 C 0
s Odobenus_rosmarus.KB229312.1                              506418 33 -   2017862 TAGAA----------G--T-AAC--TTATTTA-G-----TTT-GATG-C------A-----------AGTTCT
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   25025 20 +     28053 TAGAACATTCTTTCTA--G-AAC--------------------------------------------------
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 21
s Onychomys_torridus.OnyTor_scaffold_2986                    80026 20 +    102263 TGGAACGTTCTTTCTA--G-AAC--------------------------------------------------
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 21
s Orycteropus_afer.OryAfe_flattened_line_144387               9606 33 -     18566 TAGAA----------G--T-AAC--ATATTGA-A-----TTT-GATG-C------A-----------AATTCT
i Orycteropus_afer.OryAfe_flattened_line_144387          I 1 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147143 25 + 174332312 TAAAA----------G--TTAAC--ATGT--A-A-----T--------C------------------TGGTGT
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462109 33 -    559221 TAGAA----------A--T-GAC--GTATTTA-G-----TTT-GATG-C------A-----------AGTTCT
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4034 13 +      8798 TAGAA----------G--T-CAC----------------C--------TT-----------------------
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696197 13 -   1103335 TAGAA----------G--T-CAC----------------C--------TT-----------------------
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    43865 31 +     80009 TAGGA----------G--T-TACAA----------TTCAT--------TTGATACA-----------AATTCT
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189142773 31 + 189151597 TAGGA----------G--T-TACAA----------TTCAT--------TTGATACA-----------AATTCT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  150947 25 +    230217 ---------------------AC--GTATTTA-G-----TTT-GATG-C------A-----------AGTTCT
i Panthera_onca.PanOnc_flattened_line_3271               I 4 C 0
s Panthera_pardus.KV860321.1                                264153 25 +  18783137 ---------------------AC--GTATTTA-G-----TTT-GATG-C------A-----------AGTTCT
i Panthera_pardus.KV860321.1                             I 4 C 0
s Panthera_tigris.KE722367.1                               4721032 25 -   8748460 ---------------------AC--GTATTTA-G-----TTT-GATG-C------A-----------AGTTCT
i Panthera_tigris.KE722367.1                             I 4 C 0
s Papio_anubis.CM001495.2                                183442963 31 + 183742232 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             6661 31 +     20448 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563469 31 +  20919399 TAGGA----------A--T-TACAA----------TTAAT--------TTTATACA-----------AATTCT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   5405 31 +     41871 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     8690 31 +     27711 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  8771 31 +      9205 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12420 33 -     78924 TAGAA----------G--T-AAC--ATATTTA-G-----TTT-GATG-T------A-----------CGTTCT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10004 13 +     13100 TAGAA----------G--T-CAC----------------C--------TT-----------------------
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8410 13 +     25941 TAGAA----------G--T-CAC----------------C--------GT-----------------------
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18194652 20 -  18517816 TAGAACATTCTTCCTA--G-AAC--------------------------------------------------
i Peromyscus_maniculatus.KI615324.1                      C 0 I 21
s Petromus_typicus.PetTyp_scaffold_42190                     27974 10 -     29689 TAGAA----------G--T-AAT--------------------------------------------------
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 I 9
s Piliocolobus_badius.k141_1234363                           43424 31 +     62158 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        38155 31 +     89929 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            39571 31 +     51399 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14295809 31 -  14605196 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189130907 31 + 189387572 TAGGA----------G--T-TACAA----------TTCAT--------TTGATACA-----------AATTCT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570515 31 +   9816681 TAGGA----------G--T-TACAA----------TTCAT--------TTGATACA-----------AATTCT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               73093 31 -     81375 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              4913 31 +     19060 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 13115 33 -     22811 TAGAA----------G--T-AAC--ATACTGA-G-----TTT-GATG-C------A-----------AATTCT
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2596612 13 -   4620579 TAGAG----------T--T-CAC----------------C--------TT-----------------------
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990593 13 +   2598838 TAGAA----------T--T-CAC----------------C--------TT-----------------------
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          28905 13 +     38485 TAGAA----------T--T-CAC----------------C--------TT-----------------------
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                               948 13 -     13098 TAGAA----------T--T-CAC----------------C--------TT-----------------------
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26426 13 +     35766 TAGAA----------T--T-CAC----------------C--------TT-----------------------
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4613 13 -     24134 TAGAA----------T--T-CAC----------------C--------TT-----------------------
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28438 13 -     67325 TAGAA----------T--T-CAC----------------C--------TT-----------------------
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4661 13 -      6182 TAGAA----------T--T-CAC----------------C--------TT-----------------------
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            10263 20 -     21651 TAGAATGTTCTTTCTA--G-AAC--------------------------------------------------
i Psammomys_obesus.NESX01036370.1                        C 0 I 29
s Pteronotus_parnellii.KE909381.1                            14443 33 -     21811 TAGAA----------G--C-AAC--AGGCTTA-------CTTTGATG-C------A-----------AATTCC
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40001 33 +     42204 TAGAA----------G--T-AAC--ATATTTA-A-----TTT-GGTG-C------A-----------TGTTCT
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22976549 33 +  28871421 TAGAA----------A--T-GAC--ACATTTA-G-----TTT-GATG-C------A-----------AATTCT
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1359635 33 +   4952924 TAGAA----------A--T-GAC--ACATTTA-G-----TTT-GATG-C------A-----------AATTCT
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20274115  8 -  38429054 ------------------------------------------------C------A-----------AGTTCT
i Puma_concolor.QAVW01001104.1                           I 18 C 0
s Pygathrix_cinerea.k141_1153803                             14922 31 -     91421 TAGGA----------A--T-TACAA----------TTAAT--------TGGATACA-----------AATTCT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7609042 31 +   7812017 TAGGA----------A--T-TACAA----------TTAAT--------TGGATACA-----------AATTCT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             14894 31 -     72585 TAGGA----------A--T-TACAA----------TTAAT--------TGGATACA-----------AATTCT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53570505 20 +  90668790 ttgtgtgttctttcca--g-aAT--------------------------------------------------
i Rattus_norvegicus.chr16                                C 0 I 21
s Rhinopithecus_bieti.k119_217274                             6608 31 -     11128 TAGGA----------A--T-TACAA----------TGAAT--------TTGCTACA-----------AATTCT
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91235963 31 - 195417433 TAGGA----------A--T-TACAA----------TGAAT--------TTGCTACA-----------AATTCT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7671613 31 +   7961872 TAGGA----------A--T-TACAA----------TGAAT--------TTGCTACA-----------AATTCT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87570 33 -     96226 TAGAA----------A--T-GAC--ATATTTA-A-----TTT-GATG-C------A-----------AATTCT
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               7927 31 -      8359 CACGA----------G--C-CACAA----------CTTAT--------TTGATGCA-----------AATCCT
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_imperator.k141_2524406                             1886 31 +      2197 CGGGA----------G--C-CACAA----------CTCAT--------TTGATGCA-----------AATCCG
i Saguinus_imperator.k141_2524406                        C 0 C 0
s Saguinus_inustus.k141_699149                               13305 31 +     13640 CAGGA----------G--C-CACAA----------CTCAT--------TTGATGCA-----------AATCCG
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               8174 31 +      8564 CAGGA----------G--C-CACAA----------CTCAT--------TTGATGCA-----------AATCCG
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469023 31 + 209938924 CACGA----------G--C-CACAA----------CTTAT--------TTGATGCA-----------AATCCT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 7732 31 -      9399 CAGGA----------G--C-CACAA----------CTCAT--------TTGATGCA-----------AATCCA
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119950641 31 - 121099817 CATGA----------G--T-CACAA----------TTCAT--------TTGATGCA-----------AATCCT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23097 31 +     46362 CATGA----------G--T-CACAA----------TTCAT--------TTGATGCA-----------AATCCT
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               23192 31 +     45824 CATGA----------G--T-CACAA----------TTCAT--------TTGATGCA-----------AATCCT
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             39820 31 -     64574 CATGA----------G--T-CACAA----------TTCAT--------TTGATGCA-----------AATCCT
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               2826 31 -     23631 CATGA----------G--T-CACAA----------TTCAT--------TTGATGCA-----------AATCCT
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 23088 31 -     61129 CATGA----------G--T-CACAA----------TTCAT--------TTGATGCA-----------AATCCT
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420412 31 -   5703754 CAAGA----------G--T-CACAA----------TTCAT--------TTGATGCA-----------AATCCT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          55453 31 -     80660 CAAGA----------G--T-CACAA----------TTCAT--------TTGATGCA-----------AATCCT
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    152937 33 -    313613 GAGAA----------G--T-TAC--ATATTCA-A-----CTT-GATG-T------A-----------AATTCT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 40
s Semnopithecus_entellus.k141_11662                          19433 31 -     19888 TAGGA----------A--T-TACAA----------TTAAT--------TTGGTACA-----------AATTCT
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26636 31 +     39453 TAGGA----------A--T-TACAA----------TTAAT--------TTGGTACA-----------AATTCT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            7155 31 +     27826 TAGGA----------A--T-TACAA----------TTAAT--------TTGGTACA-----------AATTCT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             6676 31 -     19483 TAGGA----------A--T-TACAA----------TTAAT--------TTGGTACA-----------AATTCT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      6744 31 +      7198 TAGGA----------A--T-TACAA----------TTAAT--------TTGGTACA-----------AATTCT
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         15002 31 +     15514 TAGGA----------A--T-TACAA----------TTAAT--------TTGGTACA-----------AATTCT
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11762 20 -     12148 TAGAACATTCTTTTTA--G-AAC--------------------------------------------------
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 I 21
s Solenodon_paradoxus.SolPar_flattened_line_126               3557 32 +   1910179 TAGAA----------G--T-AAC--ATAT-CG-G-----TTT-GATG-C------A-----------AATTAT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13650797 27 -  18376816 ----A----------G--T-AAC--AT-TTCA-------CTT-GATG-C------C-----------AGACTT
i Sorex_araneus.JH798187.1                               C 0 I 4
s Spermophilus_dauricus.KZ294078.1                         1953759 10 -   3870691 TAGAA----------G--C-AGC--------------------------------------------------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 13
s Spilogale_gracilis.SpiGra_flattened_line_13525             30507 33 +     97271 TAGAA----------G--T-AAC--ATATTTA-G-----TTT-GATG-C------A-----------AGTTCT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              18087 33 -    196729 TAGAA----------G--T-AAT--ATATTTA-G-----TCT-GATG-T------G-----------AGTTCT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6810263 10 +  69701581 TAGAA----------G--T-AAT--------------------------------------------------
i Sus_scrofa.CM000828.4                                  C 0 I 23
s Tadarida_brasiliensis.TadBra_scaffold_25820                10561 33 +     41958 TAGAA----------G--C-AAC--ATAGTTA-------CTCTGATG-C------A-----------AATTCC
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72400 33 +    116680 TAGAA----------G--T-AAC--AGATTTA-G-----A-CAGATG-C------A-----------CATTCT
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118520 31 -    156842 TAGAA----------G--C-AGT--GTGT--A-G-----TTT-GATG-C------A-----------AATTCC
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    386977 33 +    539355 TAGAA----------G--C-AAT--GTATCTA-G-----TTT-GATG-C------A-----------AATTCG
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               26192 31 +     70052 GAGAA----------G--T-CACAG----------CTAGT--------TTGATACA-----------AATTCT
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1025 31 -     16117 GAGAA----------G--T-CACAG----------CTAGT--------TTGATACA-----------AATTCT
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428333 31 + 186847797 TAGGA----------A--T-TACAA----------TTAAT--------TTGATACA-----------AATTCT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105276 10 +    114563 TAGAA----------A--T-AAT--------------------------------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 9
s Tolypeutes_matacus.TolMat_scaffold_228639                   6202 33 +      8208 TTGAA----------G--T-AAA--GTATTTA-G-----TCT-GATG-C------A-----------AATTAT
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     80696 33 +    610378 CAGAA----------A--C-AAC--ATACTTA-------CTTTGACA-C------A-----------AATTCC
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         10727 31 -     20410 TAGGA----------A--T-TACAA----------TTAAT--------TTGGTACA-----------AATTCT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    14921 31 +     15221 TAGGA----------A--T-TACAA----------TTAAT--------TTGGTACA-----------AATTCT
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                       10828 31 +     19930 TAGGA----------A--T-TACAA----------TTAAT--------TTGGTACA-----------AATTCT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       7255 31 -     19997 TAGGA----------A--T-TACAA----------TTAAT--------TTGGTACA-----------AATTCT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            47379 31 -     60166 TAGGA----------A--T-TACAA----------TTAAT--------TTGGTACA-----------AATTCT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        14850 31 -     27529 TAGGA----------A--T-TACAA----------TTAAT--------TTGGTACA-----------AATTCT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     14794 31 -     18194 TAGGA----------A--T-TACAA----------TTAAT--------TTGGTACA-----------AATTCT
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           8522 31 -     21137 TAGGA----------A--T-TACAA----------TTAAT--------TTGGTACA-----------AATTCT
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    7225 31 -     10723 TAGGA----------A--T-TACAA----------TTAAT--------TTGGTACA-----------AATTCT
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         6381 31 +      9834 TAGGA----------A--T-TACAA----------TTAAT--------TTGGTACA-----------AATTCT
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        24694 31 +     32220 TAGGA----------A--T-TACAA----------TTAAT--------TTGGTACA-----------AATTCT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5938796 31 +   6242583 TAGGA----------A--T-TACAA----------TTAAT--------TTGGTACA-----------AATTCT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        8048 31 +     20839 TAGGA----------A--T-TACAA----------TTAAT--------TTGGTACA-----------AATTCT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4293026 33 +  10818551 TAGAA----------G--A-AAT--ATATTGG-A-----TTT-GATG-C------A-----------AGTTCT
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2155458 27 +   4065304 AAGAA----------G--T-CAT--A-GT-GACAC----C--------T------G-----------AATTCT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9109 27 -     10553 AAGAC----------G--T-CAT--A-GT-GACAC----C--------T------G-----------AATTCT
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   53114  8 -     77625 ------------------------------------------------C------A-----------AATTCT
i Uropsilus_gracilis.UroGra_scaffold_12083               I 20 I 4
s Ursus_maritimus.KK499267.1                               4850207 33 -   5085361 TAGAA----------G--T-AAC--ATATTTA-A-----TTT-GATG-C------A-----------AGTTCT
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  11272 13 +     50397 TAGAG----------T--T-TAC----------------C--------TT-----------------------
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11331 13 +     24756 TAGAG----------T--T-CAC----------------C--------TT-----------------------
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371641 33 -   5488506 CAGAA----------T--C-AAT--CGATTTA-G-----CTT-GATG-T------A-----------AATTAC
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10554 33 -     43706 TAGAA----------A--T-GAC--GTATTTA-G-----TTT-GATG-C------A-----------AGTTCT
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                           890 10 +    224448 TAGAA----------G--T-AAC--------------------------------------------------
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 14
s Zalophus_californianus.ZalCal_flattened_line_17732          5131 33 +     86975 TAGAA----------G--T-AAC--TTATTTA-G-----TTT-GATG-C------A-----------AGTTCT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      14800  7 +     63895 -------------------------------------------------------A-----------AATTCT
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 22 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             1507 165 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Ochotona_princeps.JH802162.1                             1363382  0 +   3988456 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50341  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352  0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Colobus_guereza.LG01                                   199948958  0 + 200372422 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6548 36 +     62944 GTA--G-G---------GTGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
s Acinonyx_jubatus.LLWD01001279.1                           827116 36 -   1699592 GTA--G-G---------TTTA---C--AC----CTCC-AAAT---CTATC-AA-TAC-TTTCT-T
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     70728 36 +     87051 ATAGGA-T-----------GT---C--AC----TACT-AAAA---TTATT-CA-CAG-ATATC-T
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 21 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510379 36 -  29979442 CTA--G-A---------GTTT---C--TG----CTCC-AAAA---CTATA-AA-GAG-CTGCT-T
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             79149 36 -    347723 GTA--G-C---------ATTT---C--TC----CAAC-AAAA---CTATA-AG-TAG-TTGCT-T
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     74414 38 -     89534 GGAGAA-T-------CT--TT---C--TC----TACC-AAAA---TTATA-AT-TAG-TTGTC-T
i Allactaga_bullata.AllBul_scaffold_9566                 I 17 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14479 36 -     52922 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         14415 36 -     28001 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCGTA-AA-GAG-CTATT-T
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          4911 36 -     18505 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCGTA-AA-GAG-CTATT-T
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           5765 36 -     12518 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCGTA-AA-GAG-CTATT-T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              7229 36 +     51355 GTA--G-G---------GCAT---C--TC----CTCC-AAAA---CCATA-AA-GCG-CTATT-T
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                 351 36 -     36483 GTA--G-G---------GCAT---C--TC----CTCC-AAAA---CCATA-AA-GCA-CTATT-T
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_743489                               3417 36 -     45847 GTA--G-G---------GCAT---C--TC----CTCC-AAAA---CCATA-AA-GTG-CTATT-T
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                24627 36 +     25266 GTA--G-G---------GCAT---C--TC----CTGC-AAAA---CCATA-AA-GCG-CTATT-T
i Alouatta_juara.k141_1509701                            C 0 I 13
s Alouatta_macconnelli.k141_918386                             352 36 -      9457 GTA--G-G---------GCAT---C--TC----CTGC-AAAA---CCATA-AA-GCG-CTATT-T
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_3472759                            17923 36 -     18578 GTA--G-G---------GCAT---C--TC----CTGC-AAAA---CCATA-AA-GCG-CTATT-T
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              3322 36 +     47717 GTA--G-G---------GCAT---C--TC----CTGC-AAAA---CCATA-AA-GCG-CTATT-T
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             3422 36 -      3544 GTA--G-G---------GCAT---C--TC----CTGC-AAAA---CCATA-AA-GCG-CTATT-T
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             14646 36 +     50774 GTA--G-G---------GCAT---C--TC----CTGC-AAAA---CCATA-AA-GCG-CTATT-T
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184870 35 +    412891 ATA--GGG----------CTT---C--TC----CTCC-CA-A---TTATA-AA-CAG-CTGTT-G
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  15264 36 -     33861 GTA--G-G---------GCGT---C--TC----CTCC-AAAA---CCATA-AA-GCG-CTATT-T
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            15284 36 -     34016 GTA--G-G---------GCGT---C--TC----CTCC-AAAA---CCATA-AA-GCG-CTATT-T
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297681 36 -   5030052 GTA--G-G---------GCGT---C--TC----CTCC-AAAA---CCATA-AA-GCG-CTATT-T
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             15286 36 -     34685 GTA--G-G---------GCGT---C--TC----CTCC-AAAA---CCATA-AA-GCG-CTATT-T
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28410 36 -     47192 GTA--G-G---------GCGT---C--TC----CTCC-AAAA---CCATA-AA-GCG-CTATT-T
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      12463 43 +     20879 AAA--G-GAGGGAGGGT--CT---C--TC----TGTC-AAAA---TTTCT-AA-AAG-CTGTT-T
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 14 C 0
s Arctocebus_calabarensis.k141_2318572                       11381  9 +     14667 ------------------------------------------------------TAG-CTATT-T
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4276 35 +     43469 ATG--GGG----------CTT---C--TC----CTCC-CA-A---TTATA-AG-CAG-CTGTT-A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  53562  9 -     92717 ------------------------------------------------------TAG-CTGTT-T
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54189  9 +     85213 ------------------------------------------------------TAG-CTGTT-T
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             5019 36 -     10423 GTA--G-G---------GCAT---C--TC----CTCT-AAAA---CCATA-AA-GCG-CTATT-T
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             24491 36 +     31915 GTA--G-G---------GCGT---C--TC----CTCT-AAAA---CCATA-AA-GCG-CTATT-T
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            4985 36 +      5267 GTA--G-G---------GCAT---C--TC----CTCT-AAAA---CCATA-AA-GAG-CTATT-T
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590199 36 - 189096842 GTA--G-G---------GCAT---C--TC----CTCT-AAAA---CCATA-AA-GAG-CTATT-T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             11730 36 -     12001 GTA--G-G---------GCAT---C--TC----CTCT-AAAA---CCATA-AA-GAG-CTATT-T
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002171 36 -  17673402 ATA--G-G---------ATTA---C--TC----CTCC-AAAA---TCTTA-AA-TAG-CTGTT-T
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334629 36 -   7040546 ATA--G-G---------ATTA---C--TC----CTCC-AAAA---TCTTA-AA-TAG-CTGTT-T
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  402912 36 -   1652518 ATA--G-G---------ATTA---C--TC----CTCC-AAAA---TCTTA-AA-TAG-CTGTT-T
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17798983 19 -  60362399 ---------------------------------------AAA---CTACA-AA-TAG-CTACT-T
i CanFam4.chr16                                          I 11 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    185040 19 -    185531 ---------------------------------------AAA---CTACA-AA-TAG-CTACT-T
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 11 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034426 19 -   9314153 ---------------------------------------AAA---CTACA-AA-TAG-CTACT-T
i Canis_lupus_dingo.QKWQ01000480.1                       I 11 C 0
s Canis_lupus_familiaris.chr16                            17958691 19 -  59632846 ---------------------------------------AAA---CTACA-AA-TAG-CTACT-T
i Canis_lupus_familiaris.chr16                           I 11 C 0
s Canis_lupus_orion.HG994398.1                            18500203 19 +  63665305 ---------------------------------------AAA---CTACA-AA-TAG-CTACT-T
i Canis_lupus_orion.HG994398.1                           I 11 C 0
s Capromys_pilorides.CapPil_scaffold_65020                     914 24 -     12242 ----------------------------------CTTCCAAA---TTATA-CA-TA-GTTATC-T
i Capromys_pilorides.CapPil_scaffold_65020               I 16 C 0
s Carlito_syrichta.NW_007247396.1                           201215 36 +    308752 GTA--G-G---------CTCT---C--TC----CTCC-AAAA---TTATA-AA-TAG-ATGTT-T
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                4639 35 -     11696 ACA--GGG----------CTT---C--TC----CTCC-CA-A---TTATA-AA-CAG-CTGTT-A
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    136967 30 +    179628 GCA--G-G-----------GT---C--TCTCTCTACC-AAAA---TTATA-AA-T----------
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     92802 36 +    217609 GTA--GTG----------TTT---C--TC----CTCT-AAAA---TTTTT-AA-AAG-CTGCT-T
i Catagonus_wagneri.CatWag_scaffold_2839                 I 23 C 0
s Cebuella_niveiventris.k141_1251222                          9644 36 -     11392 GTA--G-G---------GTGT---C--TC----CTCT-AAAA---CCATA-AA-GCG-CTATT-T
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               5742 36 -      7577 GTA--G-G---------GTGT---C--TC----CTCT-AAAA---CCATA-AA-GCG-CTATT-T
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25651772 36 +  26074798 GTA--G-G---------ACGT---C--TC----CTCC-AAAA---CCATA-AC-GTG-CTATT-T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_398305                                 1348 36 +      1777 GTA--G-G---------ACGT---C--TC----CTCC-AAAA---CCATA-AC-GTG-CTATT-T
i Cebus_olivaceus.k141_398305                            C 0 C 0
s Cebus_unicolor.k141_544048                                 49685 36 -     74725 GTA--G-G---------ACGT---C--TC----CTCC-AAAA---CCATA-AC-ATG-CTATT-T
i Cebus_unicolor.k141_544048                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         5221 36 +     31688 GTA--G-G---------CTCT---C--TC----CTCC-AAAA---TTATA-AA-TAG-ATGTT-T
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12231228 36 +  27778364 GTA--G-G---------GTTT---C--TC----CTCC-AAAA---TTATA-AA-GAG-CTGGG-T
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2255 36 -     25243 GTA--G-G---------GTTT---C--TC----CTCC-AAAA---TTATA-AA-GAG-CTGGG-T
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4475424 36 +   4669795 GCA--G-G---------GCAT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        13969 36 -     19203 GCA--G-G---------GCAT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3342297                            585 36 -     14043 GCA--G-G---------GCAT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           8621 36 +     27781 GCA--G-G---------GCAT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         8786 36 -     20310 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          11765 36 +     29689 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            6519 36 -     20078 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          14442 36 -     27936 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            3306 36 -     17152 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38816845 36 +  39242232 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222537 36 -  21565898 GCA--G-G---------GTGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       39655 36 -     53127 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        6924 36 +      7159 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14456 36 -     27947 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         14431 36 +     17596 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                           478 36 +     14005 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             334 36 -      8501 GTA--G-G---------GTTT---C--TC----ACCC-AAAC---TTATC-AA-TAG-CTGAT-T
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             20941  9 -     52598 ------------------------------------------------------TAG-CTGTT-T
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16306  9 +     57038 ------------------------------------------------------TAG-CTGTT-T
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1252656 35 +   2543920 ATA--T-G-----------GT---T--TG----TCTTCCAAA---TTACA-AA-TAG-TCATA-T
i Chinchilla_lanigera.JH722012.1                         I 9 C 0
s Chiropotes_albinasus.k141_2813271                          10896 36 +     11226 GCA--G-G---------GCAT---C--TC----CTCC-AAAA---CCATA-AA-GCG-CTATT-T
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18428415 36 -  18827391 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCGTA-AA-AAG-CTATT-T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       14852 36 -     50209 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCGTA-AA-AAG-CTACT-T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135421852 36 + 135778131 GCA--A-G---------GCGT---C--TC----CTCC-AAAA---TCGTA-AA-AAG-CTATT-T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 18112 36 +     19366 GTA--G-G---------GTTC---C--TC----CTCC-AAAC---TTATA-AA-CAG-CTGTT-T
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            173188 36 +    839153 GTA--G-G---------GTTC---C--TC----CTCC-AAAC---TTATA-AA-CAG-CTGTT-T
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1910357 36 +   2368649 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_polykomos.k141_906115                              36895 36 +     84244 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17547896 36 -  53390261 GAA--G-G---------GTTT---C--TC----TTCC-AAGA---TTACA-AA-TAG-CTATT-T
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14213 36 -     20389 TAA--G-G---------GTTT---C--TC----CTCC-CAAG---TTATA-AA-TAG-CTGTT-T
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 49982 36 +     63868 GTAGAA-G-----------AT---C--TC----TACT-AAAA---TCATA-AA-CAG-ATATC-T
i Cricetomys_gambianus.CriGam_scaffold_18520             I 21 C 0
s Cricetulus_griseus.LT883664.1                           11667486 36 + 224834208 GTAGGA-T-----------TT---C--TC----TACT-AAAA---TTACA-GA-TGG-GTATC-T
i Cricetulus_griseus.LT883664.1                          I 21 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               2772 31 -     19598 -----------------ACTA---C--TC----TTCC----CAAATTACA-AA-ACA-GCAAT-T
i Crocidura_indochinensis.CroInd_scaffold_37019          I 7 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28286 36 -     87169 GTA--G-G---------GTTT---C--TC----CTCC-AATA---TTATA-AA-TAG-CTGCT-T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    836958 35 +   1526836 GTA--C-A-----------AT---C--TC----TACTGCATG---GTATA-AG-TAG-CCATC-T
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 9 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35607 35 +     51376 ATA--T-G-----------GT---C--TG----TCTTCCAAA---TTATA-AA-TAC-TCATT-T
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 9 C 0
s Dasypus_novemcinctus.JH564415.1                            63341 36 +   2246927 GTA--G-G---------GTTT---C--TT----ATCC-AAAC---TTATC-AA-TAG-CTGTT-T
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537170  9 -  12879189 ------------------------------------------------------TAG-CTGTT-T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8629654 35 +  20541912 ATA--GGG----------CTT---C--TC----CTCC-CA-A---TTATA-AA-CAG-CTGTT-A
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673079 36 +   1390856 GTA--C-G---------GTTT---C--TC----CTCC-AAAA---TTATA-AA-GAG-CTGTG-T
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    5831 36 +    198055 GTA--G-G---------GTTT---C--TC----CTCC-AAAA---TTATA-AA-GAG-CTGGG-T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36249 35 +     67921 ATA--T-G-----------GT---C--TG----TCTTCTAAA---TTATA-AA-TAG-TCATA-T
i Dinomys_branickii.DinBra_scaffold_21862                I 9 C 0
s Echinops_telfairi.JH980293.1                            48780213 36 + 111700974 AAA--G-G---------GGTT---C--AC----CTCC-CAAA---TTATA-AA-TAG-CTGTT-C
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.KE759718.1                                  10323 36 +     11740 ATA--G-C---------ATTT---C--TC----CTCC-CAAA---TTATA-AA-TAG-CTATT-A
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1097514 36 +  10337057 AAA--G-G---------TTTT---C--AC----CTTC-AATA---TTATA-AA-TAG-CTGTC-T
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          20219 36 -    110024 GTAGAA-T-----------AT---T--TC----TACT-AAAA---TTACA-GA-CAG-ATATT-T
i Ellobius_lutescens.LOEQ01008920.1                      I 21 C 0
s Ellobius_talpinus.LOJH01081419.1                             350 36 +      8657 GTAATA-T-----------AT---T--TC----TACT-AAAA---TTACA-GA-CAG-ATATT-T
i Ellobius_talpinus.LOJH01081419.1                       I 21 C 0
s Enhydra_lutris.KZ291758.1                               16329123 31 -  41312741 -----------------GTTT---C--TC----CACC-AAAT---CTATA-AG-CAG-CTGCT-T
i Enhydra_lutris.KZ291758.1                              I 3 C 0
s Eptesicus_fuscus.JH977646.1                              2145513 35 -  14770903 GTA--G-G----------TTT---C--TC----CTCC-TCCA---CTATA-AA-AAG-CTGTT-A
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1283347 36 +   4378816 GCA--G-G---------GTTT---C--tc----ttct-aaaa---ttata-aa-tag-ctGTC-T
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18531168 36 -  39960074 GCA--G-G---------GTTT---C--Tc----ttct-aaaa---ttata-aa-tag-cTGTC-T
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               33196 36 +    498745 GCA--G-G---------GTTT---C--Tc----ttct-aaaa---ttata-aa-tag-cTGTC-T
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3328067 30 -   7059049 -----------------AGTC---CCTCC----TCC--AAAA---TTAT---G-TGG-CTTTT-T
i Erinaceus_europaeus.JH835339.1                         I 4 C 0
s Erythrocebus_patas.Contig38                             21205022 36 -  21539334 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCGTA-AA-GAG-CTATT-T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13666  9 -     14127 ------------------------------------------------------TAG-CTGTT-T
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6369  9 -     16928 ------------------------------------------------------TAG-CTGTT-T
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15393  9 -     25546 ------------------------------------------------------TAG-CTGTT-T
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12597  9 +     26330 ------------------------------------------------------TAG-CTGTT-T
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 13832  9 +     23973 ------------------------------------------------------TAG-CTGTT-T
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12594  9 +     75513 ------------------------------------------------------TAG-CTGTT-T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10524  9 +     97555 ------------------------------------------------------TAG-CTGTT-T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            13456  9 +     26496 ------------------------------------------------------TAG-CTGTT-T
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4068  9 -     17153 ------------------------------------------------------TAG-CTGTT-T
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13641  9 +    111500 ------------------------------------------------------TAG-CTGTT-T
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20236767 36 + 206538554 GTA--G-G---------GTTA---C--GC----CTCC-AAAT---CTATC-AA-TAG-TATCT-T
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195610 36 + 205367284 GTA--G-G---------GTTA---C--GC----CTCC-AAAT---CTATC-AA-TAG-TATCT-T
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  9358 36 -     36744 GTA--G-G---------GTTA---C--GC----CTCC-AAAT---CTATC-AA-TAG-TATCT-T
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             849231 35 +   3816255 ATA--T-G-----------GC---C--TG----TATTCCAAA---CTATA-AA-AAG-CCatc-t
i Fukomys_damarensis.KN121974.1                          I 9 I 1065
s Galago_moholi.ctg2040                                     426515  9 -    453645 ------------------------------------------------------TAG-CTGTT-T
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4206  9 +     11339 ------------------------------------------------------TAG-CTGTT-T
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            1519  9 +     41679 ------------------------------------------------------TAG-CTGTT-T
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1023 31 -      9135 GTA--G-G---------GTCT---C--CC----CTCC-AAAA---TTATA-AA-CAG-C------
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              15803 36 -     32273 GTA--G-G---------GCAT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186337949 36 + 186649187 GTA--G-G---------GCAT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6704  9 -     19426 ------------------------------------------------------TAG-CTGTT-T
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             11853  9 -     15286 ------------------------------------------------------TAG-CTGTT-T
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13492  9 +     18253 ------------------------------------------------------TAG-CTGTT-T
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13593  9 -     41752 ------------------------------------------------------TAG-CTGTT-T
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13430  9 -     16460 ------------------------------------------------------TAG-CTGTT-T
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242120 36 +    327341 GTA--G-G---------GGTT---C--TC----CTCC-AACA---CTATA-AA-TAG-CTGCT-T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20662079 35 +  22651954 ATA--T-G-----------GC---C--TG----TCTTCCAAA---TTATA-AA-TAG-CCATC-T
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                 693 36 +      7595 GAA--G-G---------GTTT---C--AC----CTTC-AAAA---TTATA-CA-GAG-CTGTT-T
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hoolock_leuconedys.ctg274                                    434615 36 +    630532 GTA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  44814 36 +     55795 ATA--G-G---------GTTT---C--TC----CTCC-AGTA---CTATA-AA-TAG-CTGCT-T
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      82790 35 +    135385 GTA--T-G-----------GT---C--TG----TCTTCCAAA---TTGTA-AA-TAG-CAATC-T
i Hystrix_cristata.HysCri_scaffold_5660                  I 9 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7520731 29 -   7955117 -------------------AT---C--tc----tacc-aaaa---tttta-aa-tag-ctgtt-t
i Ictidomys_tridecemlineatus.JH393364.1                  I 13 C 0
s Indri_indri.k141_3655594                                   22383  9 +     31101 ------------------------------------------------------TAG-CTGTT-T
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8276723 26 -   9596543 ---------------------------ac----tact-AAAA---TTATA-AT-TAG-TTGTT-T
i Jaculus_jaculus.JH725527.1                             I 27 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    13929 35 -     42476 GGA--G-G----------TTT---C--TC----CTCC-CCAA---TTATA-AA-AAG-CTGTT-A
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15523945  9 -  30322482 ------------------------------------------------------TAG-CTGTT-T
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7281 36 +     64341 GTA--G-G---------GCAT---C--TC----CTCC-AAAA---CCATA-AA-GCA-CTATT-T
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           4604 36 +      4941 GTA--G-G---------GCAT---C--TC----CTCC-AAAA---CCATA-AA-GCG-CTATT-T
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        7322 36 +     35603 GTA--G-G---------GCAT---C--TC----CTCC-AAAA---CCATA-AA-GCA-CTATT-T
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    28793 36 +     38576 GTA--G-G---------GCGT---C--TC----CTCT-AGAA---CCATA-AA-GCG-CAATT-T
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         25490 36 +     66356 GTA--G-G---------GCGT---C--TC----CTCT-AGAA---CCATA-AA-GCG-CAATT-T
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         10843  9 -     23766 ------------------------------------------------------TAG-CTGTT-T
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             28904  9 +     45836 ------------------------------------------------------TAG-CTGTT-T
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1440  9 +     25010 ------------------------------------------------------TAG-CTGTT-T
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      26840  9 +     54090 ------------------------------------------------------TAG-CTGTT-T
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3042644 36 +   3914936 TTA--G-A---------GTTT---C--TC----CTCC-AAAA---CTATA-AA-TAG-CTGTT-T
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6288 43 -     14121 AAA--T-GCTG-AGG-CGTCT---C--TC----CTCC-AAAA---TTATA-AA-CAG-CTACT-T
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1436971 36 +   1826925 GCA--G-G---------GCAT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5763  9 +     11245 ------------------------------------------------------TAG-CTGTT-T
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004583  9 +   6120653 ------------------------------------------------------TAG-CTGTT-T
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4217121 36 -  43346337 GAA--G-G---------GCTT---C--AC----CTCC-AAAA---TTATA-AA-GAG-CTGTT-T
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17954931 19 -  59628241 ---------------------------------------AAA---CTACA-AA-TAG-CTACT-T
i Lycaon_pictus.CM007581.1                               I 11 C 0
s Macaca_arctoides.k141_2326796                               6781 36 +     40492 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59676040 36 +  60120075 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 12553 36 -     26193 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            80337 36 -    114318 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  6028 36 -     23192 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                15497 36 -     29190 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  24062 36 +     37952 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186839151 36 + 187317192 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25457714 36 -  25927173 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  79910 36 +     89720 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 6911 36 +     20474 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   6711 36 -     14993 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  329577 36 -    668171 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 5027 36 -     24072 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               25649 36 -     45290 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90422 36 +     94391 ATA--G-C---------GTTT---C--TC----CTCT-CAAA---TTATA-AA-TAG-CTGTT-A
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23937244 36 -  24302211 GCA--G-G---------GCAT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               351372 36 +    752769 GCA--G-G---------GCAT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33102913 43 -  40650429 GTA--G-GAGATAGGGA--AT---C--TC----TACC-AAAA---TTCCA-AA-Tag-ctgtt-t
i Marmota_marmota.CZRN01000018.1                         I 14 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        10131 36 -    207569 ATC--G-G---------GTTA---C--TC----CTCC-CAAA---TTATA-AA-TAG-CTGTT-A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              9844 36 +     13704 ACA--G-A---------GTTA---C--TC----CACC-AAAA---CTGTA-AG-TAG-CTGCT-T
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 32675 23 +    140813 ----------------------------------ACT-AAAA---TTATA-AA-CAG-ATATC-T
i Meriones_unguiculatus.MerUng_scaffold_7390             I 29 C 0
s Mesocricetus_auratus.KB708134.1                         12182164 36 -  29670104 GTAGAA-T-----------CT---C--TG----TACT-AAAA---TTACA-GA-CAG-GTGTC-T
i Mesocricetus_auratus.KB708134.1                        I 21 C 0
s Mico_argentatus.k141_1239457                                5559 36 -      7380 GTA--G-G---------GCAT---C--TC----CTCT-AAAA---CCATA-AA-GCG-CTATT-T
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               4632 36 +     18990 GTA--G-G---------GCAT---C--TC----CTCT-AAAA---CCATA-AA-GCG-CTATT-T
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      5571 36 -      7356 GTA--G-G---------GCAT---C--TC----CTCT-AAAA---CCATA-AA-GCG-CTATT-T
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18291365  9 -  93316391 ------------------------------------------------------TAG-CTGTT-T
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    21951 36 -    145209 AAA--A-G---------GTTT---C--AC----CTCC-CAAA---TTATA-AA-TAG-CTGTT-C
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                15182 35 -     19307 ATA--GGG----------CTT---C--TC----CTCC-CA-A---TTAGA-AA-CAG-CTGTT-A
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11260398 36 -  27267610 GTAAAA-T-----------AA---C--TC----TACT-AAAA---TTACA-GG-CAG-ATATT-T
i Microtus_ochrogaster.CM001695.1                        I 21 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850428 36 +   8254450 ACA--G-G---------CTTT---C--TC----CTCC-CAAC---TTACA-AA-TAG-CTGCT-A
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34105 36 +     64694 ACA--G-G---------CTTT---C--TC----CTCC-CAAC---TTACA-AA-TAG-CTGCT-A
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           8969 36 -     28506 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATA-T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         5512 36 -      8324 TTA--G-A---------GTTT---C--TC----CTCC-AAAA---CTATA-AA-TAG-CTGTT-T
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      8910  9 -     37649 ------------------------------------------------------TAG-CTGTT-T
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141137 36 -    366855 ACT--GGG----------TTT---C--TC----CTCC-CAAA---ATATA-AA-CAG-CTGTT-A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35219 36 +     37127 GTA--G-G---------GTTT---C--TC----CTCC-AATA---CTATA-AA-TAG-CTACT-T
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           6608 35 +     14753 GTA--G-T----------TTT---C--TC----CTCC-CCAA---TTATA-AA-AAG-CTGTT-A
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84361280 36 - 120012414 TTAGAA-C-----------AC---C--AC----TCCT-AAAA---TTATA-GA-CAG-ATATC-G
i Mus_caroli.LT608237.1                                  I 21 C 0
s Mus_musculus.chr8                                       87650278 36 - 129401213 TTAGAA-C-----------AC---C--AC----TCCT-AAAA---TTATA-GA-CAG-ATATC-A
i Mus_musculus.chr8                                      I 21 C 0
s Mus_pahari.LT608297.1                                   31354937 36 -  89631738 TTAGAA-C-----------AC---C--AC----TCCT-AAAA---GTATA-GA-CAG-ATATT-G
i Mus_pahari.LT608297.1                                  I 21 C 0
s Mus_spretus.CM004101.1                                  90752339 36 - 130317789 TTAGAA-C-----------AC---C--AC----TCCT-AAAA---TTATA-GA-CAG-ATATC-G
i Mus_spretus.CM004101.1                                 I 21 C 0
s Mustela_putorius.JH418006.1                               301035 36 -  14710649 ACA--G-A---------GTTT---C--TC----TACC-AAAT---CTATA-AG-TAG-CTGCT-T
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71094 29 -     80779 ACA--T-G-----------GT---C--TA----TCTTCCAAA---TTTTA-TA-TAT--------
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 9 I 8
s Myotis_brandtii.KE162005.1                                280253 35 -  10118263 GTA--G-G----------TTT---C--TC----CTCC-CCAA---TTATA-AA-AAG-CTGTT-A
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1587521 35 -   6019432 GTA--G-G----------TTT---C--TC----CTCC-CCAA---TTATA-AA-AAG-CTGTC-A
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3903607 35 -   4330536 GTA--G-G----------TTT---C--TC----CTCC-CCAG---TTATA-AA-AAG-CTGTT-A
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_482318                         281 35 -       721 GTA--G-G----------TTT---C--TC----CTCC-CCAA---TTATA-AA-AAG-CTGTT-A
i Myotis_myotis.MyoMyo_scaffold_482318                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189063 36 +    196477 GTA--G-G---------ATTT---C--TT----CTCC-AAAT---GTATA-AA-TAG-CTGTT-T
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2033971 38 -   3037898 gtgggttt-----------tt---c--tc----tact-aaaa---ttattttt-taa-ttgtc-c
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               14944 36 +     21681 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCCTA-AA-GAG-CTATT-T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306766 36 +  31847680 TTA--G-A---------GTTT---C--TC----CTCC-AAAA---CTATA-AA-TAG-CTGTT-T
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149174 36 -   9404916 GTA--G-A---------GTTT---C--TC----CCCC-TAAA---CTACA-AA-TAG-CTGCT-T
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102579555  9 - 196305487 ------------------------------------------------------TAG-CTGTT-T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_771082                              1400  9 -      2667 ------------------------------------------------------TAG-CTGTT-T
i Nycticebus_coucang.k141_771082                         C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749983  9 + 199412804 ------------------------------------------------------TAG-CTGTT-T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Octodon_degus.JH651603.1                                  746689 35 +  11899542 ATG--A-G-----------GT---C--TG----TCTTCCAAA---TTGTA-AG-TAT-TCATA-T
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                              506451 36 -   2017862 GTA--A-A---------GTTT---C--TC----CTCC-AAAA---CTATA-AA-TAG-CTGCT-T
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   25066 36 +     28053 GTAGAA-T-----------AT---C--TC----TACT-AAAA---TTACA-GA-CAG-ATATT-T
i Ondatra_zibethicus.OndZib_scaffold_46174               I 21 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    80067 36 +    102263 GTAGCA-T-----------AT---C--TC----TACT-AAAA---TGACA-GA-CAG-ATATC-T
i Onychomys_torridus.OnyTor_scaffold_2986                I 21 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9639 36 -     18566 GAA--G-G---------GTTT---C--AT----CTTC-AAAA---TTATA-AA-TAG-CTGTT-T
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147168 43 + 174332312 AAA--T-GCTG-AGG-CGTCT---C--TC----ATCC-AAAA---TTATA-AA-TAG-CTACT-T
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462142 36 -    559221 GTA--G-A---------GTTT---C--TC----CCCC-TAAA---CTACA-AA-TAG-CTACT-T
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4047  9 +      8798 ------------------------------------------------------TAG-CTGTT-T
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696210  9 -   1103335 ------------------------------------------------------TAG-CTGTT-T
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    43896 36 +     80009 GTA--G-G---------GCAT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189142804 36 + 189151597 GTA--G-G---------GCAT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  150972 36 +    230217 GTA--G-A---------GTTT---C--TC----CTCC-AAAT---CCATC-AA-TAG-TTTCT-T
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                264178 36 +  18783137 GTA--G-G---------GTTT---C--TC----CTCC-AAAT---CCATC-AA-TAG-TTTCT-T
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4721057 36 -   8748460 GTA--G-G---------GTTT---C--TC----CTCC-AAAT---CCATC-AA-TAG-TTTCT-T
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183442994 36 + 183742232 GCA--G-G---------GCAT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             6692 36 +     20448 GCA--G-G---------GCAT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563500 36 +  20919399 GCA--G-G---------GCAT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   5436 36 +     41871 GCA--G-G---------GCAT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     8721 36 +     27711 GCA--G-G---------GCAT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  8802 36 +      9205 GCA--G-G---------GCAT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12453 36 -     78924 CTA--C-G---------ATTT---C--TC----CTCC-AAAA---CCATA-AA-TAG-CTGCT-T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10017  9 +     13100 ------------------------------------------------------TAG-CTATT-T
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8423  9 +     25941 ------------------------------------------------------TAG-CTATT-T
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18194693 36 -  18517816 GTAGCA-T-----------AT---C--TC----TACT-AAAA---TTACT-GA-CGG-CTATC-T
i Peromyscus_maniculatus.KI615324.1                      I 21 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     27993 35 -     29689 ATC--T-G-----------GC---C--TG----TCTTCCAAA---TTATA-AA-TAA-CCATC-T
i Petromus_typicus.PetTyp_scaffold_42190                 I 9 C 0
s Piliocolobus_badius.k141_1234363                           43455 36 +     62158 GCA--G-G---------GTGT---C--TC----CTCC-AAAA---TCATA-AA-GAA-CTATT-T
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        38186 36 +     89929 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAA-CTATT-T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            39602 36 +     51399 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAA-CTATT-T
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14295840 36 -  14605196 GCA--G-G---------GTGT---C--TC----CTCC-AAAA---TCATA-AA-GAA-CCATT-T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189130938 36 + 189387572 GTA--G-G---------GCAT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570546 36 +   9816681 GTA--G-G---------GCAT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               73124 36 -     81375 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              4944 36 +     19060 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 13148 36 -     22811 GAA--G-G---------GTTT---C--AC----CTTC-AAAA---TTATA-CA-GAG-CTGTT-T
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2596625  9 -   4620579 ------------------------------------------------------TAG-CTGTT-T
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990606  9 +   2598838 ------------------------------------------------------TAG-CTGTT-T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          28918  9 +     38485 ------------------------------------------------------TAG-CTGTT-T
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                               961  9 -     13098 ------------------------------------------------------TAG-CTGTT-T
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26439  9 +     35766 ------------------------------------------------------TAG-CTGTT-T
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4626  9 -     24134 ------------------------------------------------------TAG-CTGTT-T
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28451  9 -     67325 ------------------------------------------------------TAG-CTGTT-T
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4674  9 -      6182 ------------------------------------------------------TAG-CTGTT-T
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            10312 23 -     21651 ----------------------------------ACT-AAAA---TTATA-AA-CAG-ATATC-T
i Psammomys_obesus.NESX01036370.1                        I 29 C 0
s Pteronotus_parnellii.KE909381.1                            14476 36 -     21811 ATT--GGG----------TGT---C--TC----CGCC-CAAA---TTAGA-GG-CGG-CTGTT-A
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40034 36 +     42204 ACA--G-A---------GTTT---C--TC----CACC-AAAT---CTATA-AG-TAG-CTGCT-T
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22976582 36 +  28871421 ATA--G-T---------GTTT---C--TC----CTCC-CAAA---TTATA-AA-TAG-CTGTT-A
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1359668 36 +   4952924 ATA--G-T---------GTTT---C--TC----CTCC-CAAA---TTATA-AA-TAG-CTGTT-A
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20274123 36 -  38429054 GTA--G-G---------GTTA---C--AC----CTCC-AAAT---CTATC-AA-TAG-TTTCT-T
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             14953 36 -     91421 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7609073 36 +   7812017 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             14925 36 -     72585 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53570546 36 +  90668790 GTAGGA-C-----------AT---C--AC----GATC-AAGA---CTATA-GA-CAG-ATATC-T
i Rattus_norvegicus.chr16                                I 21 C 0
s Rhinopithecus_bieti.k119_217274                             6639 36 -     11128 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91235994 36 - 195417433 GCA--G-G---------GCGT---C--TC----CTGC-AAAA---TCATA-AA-GAG-CTATT-T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7671644 36 +   7961872 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87603 36 -     96226 ATA--G-T---------GTTT---C--TC----CTCT-CAAA---TTATA-AA-TAG-CTATT-A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               7958 36 -      8359 GCA--G-G---------GCAT---C--TC----CTCC-AAAA---CCATA-AA-GCG-CTATT-T
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_imperator.k141_2524406                             1917 36 +      2197 GTA--G-G---------GCGT---C--TC----CTCC-AAAA---CCATA-AA-GCG-CTATT-T
i Saguinus_imperator.k141_2524406                        C 0 C 0
s Saguinus_inustus.k141_699149                               13336 36 +     13640 GTA--G-G---------GCGC---C--TC----CTCC-AAAA---CCATA-AA-GCG-CTATT-T
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               8205 36 +      8564 GTA--G-G---------GCGT---C--TC----CTCC-AAAA---CCATA-AA-GCG-CTATT-T
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469054 36 + 209938924 GTA--G-G---------GCAT---C--TC----CTCC-AAAA---CCATA-AA-GCG-CTATT-T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 7763 36 -      9399 GTA--G-G---------GCGT---C--TC----CTCC-AAAA---CCATA-AA-GCG-CTATT-T
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119950672 36 - 121099817 GTA--G-G---------GCAT---C--TG----CTCC-AAAA---CCATA-AA-GCG-CTATT-T
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23128 36 +     46362 GTA--G-G---------GCAT---C--TG----CTCC-AAAA---CCATA-AA-GCG-CTATT-T
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               23223 36 +     45824 GTA--G-G---------GCAT---C--TG----CTCC-AAAA---CCATA-AA-GCG-CTATT-T
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             39851 36 -     64574 GTA--G-G---------GCAT---C--TG----CTCC-AAAA---CCATA-AA-GCG-CTATT-T
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               2857 36 -     23631 GTA--G-G---------GCAT---C--TG----CTCC-AAAA---CCATA-AA-GCG-CTATT-T
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 23119 36 -     61129 GTA--G-G---------GCAT---C--TG----CTCC-AAAA---CCATA-AA-GCG-CTATT-T
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420443 36 -   5703754 GTA--G-G---------ACGT---C--TC----CTCC-AAAA---CCATA-AC-GTG-CTATT-T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          55484 36 -     80660 GTA--G-G---------ACGT---C--TC----CTCC-AAAA---CCATA-AC-GTG-CTATT-T
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153010 37 -    313613 ATA--G-G---------GTTT---C--TC----TTCC-AAAA---TTACA-AA-TAG-CTATTTT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 40 C 0
s Semnopithecus_entellus.k141_11662                          19464 36 -     19888 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-TTATT-T
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26667 36 +     39453 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            7186 36 +     27826 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             6707 36 -     19483 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      6775 36 +      7198 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         15033 36 +     15514 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11803 36 -     12148 GTGAAA-T-----------AT---C--TC----TATT-AAAA---TTATA-TG-CAG-ATATC-T
i Sigmodon_hispidus.SigHis_scaffold_60841                I 21 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               3589 34 +   1910179 GCA--G-G---------GTTT---C--TT----CTTC----A---TTATATAA-AGA-CTGTT-T
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13650828 31 -  18376816 -----------------TTTT---C--TC----CTCC----AAACTTATA-AAATCG-TTTTT--
i Sorex_araneus.JH798187.1                               I 4 C 0
s Spermophilus_dauricus.KZ294078.1                         1953782 29 -   3870691 -------------------AT---C--tc----tacc-aaaa---tttta-aa-tag-ctgtt-t
i Spermophilus_dauricus.KZ294078.1                       I 13 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30540 36 +     97271 GTT--G-A---------GTTT---C--TC----CACC-AAAA---CTACA-AG-CAG-CTCCT-T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              18120 36 -    196729 GTA--G-G---------GTTT---C--TC----CTCC-AATA---CTATA-AA-TAG-CTACT-T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6810296 36 +  69701581 GTA--GGG----------TTT---c--ta----ctcc-aaaa---ttttt-aa-aag-ctgtt-t
i Sus_scrofa.CM000828.4                                  I 23 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                10594 39 +     41958 ATA--G-G---------GTTTTTTC--TC----CTGA-CAAA---TTATA-AA-TAG-CTGCT-A
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72433 36 +    116680 GTA--G-G---------ATTT---C--TT----CTCC-AAAC---TTATA-AA-TAG-CTGTT-T
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118551 36 -    156842 GTA--G-G---------GTTT---C--TC----CTCC-AAAA---CCATA-AG-TAG-CTGTT-T
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387010 36 +    539355 GTA--G-G---------GTTT---C--TC----TTCC-AAAA---TCATA-AG-TAG-CTGTT-T
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               26223 36 +     70052 GTA--G-G---------ATCT---C--TC----CTCC-AAAA---TTATA-AA-TAG-ATGTT-T
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1056 36 -     16117 GTA--G-G---------ATCT---C--TC----CTCC-AAAA---TTATA-AA-TAG-ACGTT-T
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428364 36 + 186847797 GCA--G-G---------GCAT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105295 35 +    114563 ATA--T-G-----------GC---C--TA----TCTTCCAAA---TTACA-AA-TAG-CCATC-T
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 9 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   6235 36 +      8208 GTA--G-C---------GTTT---C--TC----ACCC-AAAC---TTATC-AA-CAG-CTGTT-T
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     80729 35 +    610378 GTA--GGG----------CTT---C--TC----CTCC-CA-A---TTATA-AA-CAG-CTGTT-A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         10758 36 -     20410 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    14952 36 +     15221 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                       10859 36 +     19930 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       7286 36 -     19997 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            47410 36 -     60166 GCA--G-G---------GTGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        14881 36 -     27529 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     14825 36 -     18194 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           8553 36 -     21137 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    7256 36 -     10723 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         6412 36 +      9834 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        24725 36 +     32220 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5938827 36 +   6242583 GCA--G-G---------GCGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        8079 36 +     20839 GCA--G-G---------GTGT---C--TC----CTCC-AAAA---TCATA-AA-GAG-CTATT-T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4293059 36 +  10818551 GAA--G-G---------GTTT---C--AC----Ctcc-aaaa---ttaaa-aa-tag-ctGTT-T
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2155485 36 +   4065304 GTC--G-A---------CTCT---C--TC----CTTC-AAAG---TTATC-AA-TAG-CTGTT-T
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9136 36 -     10553 GTC--G-A---------CTCT---C--TC----CTTC-AAAG---TTATC-AA-TAG-CTGTT-T
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   53126 30 -     77625 -----------------ATTT---C--AC----TT-C-AGAA---TTACA-AA-TGA-TTATT-T
i Uropsilus_gracilis.UroGra_scaffold_12083               I 4 C 0
s Ursus_maritimus.KK499267.1                               4850240 36 -   5085361 CTA--G-A---------GTTT---C--TC----CTCC-AAAA---CTATA-AA-TAG-CTGCT-T
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  11285  9 +     50397 ------------------------------------------------------TAG-CTGTT-T
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11344  9 +     24756 ------------------------------------------------------TAG-CTGTT-T
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371674 36 -   5488506 ATA--G-G---------GTTA---C--Tc----ctcc-aaaa---tttta-aa-tag-ctgtt-T
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10587 36 -     43706 GTA--G-A---------GTTT---C--TC----TCCC-TAAA---CTACA-AA-TAG-CTGCT-T
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                           914 43 +    224448 TTA--G-GAGACAGGGT--AC---C--CC----TACC-AAAA---TTTCA-AA-TAG-CTATT-T
i Xerus_inauris.XerIna_scaffold_2302                     I 14 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          5164 36 +     86975 ATA--A-A---------GTTT---C--TC----CTCC-AAAA---CTATA-AA-TAG-CTGCT-T
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      14807 38 +     63895 GGAGGA-T-------CT--CT---C--TC----TACC-AAGA---TTATA-CA-TAG-TTGTC-T
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             1507 165 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Ochotona_princeps.JH802162.1                             1363382  0 +   3988456 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50341  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352  0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Colobus_guereza.LG01                                   199948958  0 + 200372422 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6584 10 +     62944 CATTAG--------TTTA
s Acinonyx_jubatus.LLWD01001279.1                           827152 10 -   1699592 TATTAA--------TATA
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     70764 10 +     87051 TGCTAA--------TTTA
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510415 10 -  29979442 TATTGA--------TATA
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             79185 10 -    347723 TATTGA--------TATA
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     74452 10 -     89534 CACTAA--------TTAG
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14515 10 -     52922 CATTAG--------TTTA
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         14451 10 -     28001 CATTAG--------TTTA
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          4947 10 -     18505 CATTAG--------TTTA
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           5801 10 -     12518 CATTAG--------TTTA
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              7265 10 +     51355 CATTAG--------TTTA
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                 387 10 -     36483 CATTAG--------TTTA
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_743489                               3453 10 -     45847 CGTTAG--------TTTA
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_2469512                                  863 10 +      1018 CATTAG--------TTTA
i Alouatta_juara.k141_2469512                            I 207 C 0
s Alouatta_macconnelli.k141_918386                             388  8 -      9457 CATTAG--------TT--
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_3472759                            17959 10 -     18578 CATTAG--------TTTA
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              3358 10 +     47717 CATTAG--------TTTA
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             3458 10 -      3544 CATTAG--------TTTA
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             14682  8 +     50774 CATTAG--------TT--
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      184905 10 +    412891 TAttaa--------tcaa
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 270
s Aotus_azarae.k141_3104676                                  15300 10 -     33861 CATTAG--------TTTA
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            15320 10 -     34016 CATTAG--------TTTA
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297717 10 -   5030052 CATTAG--------TTTA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             15322 10 -     34685 CATTAG--------TTTA
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28446 10 -     47192 CATTAG--------TTTA
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      12506 10 +     20879 CATTAA--------TTTA
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       11390 10 +     14667 CAGTAA--------CTTA
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4311 10 +     43469 TATtaa--------tcaa
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 272
s Avahi_laniger.k141_765380                                  53571 10 -     92717 CATTTA--------CCTG
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54198 10 +     85213 CATTTA--------CCTG
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             5055 10 -     10423 CATTAG--------TTTA
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             24527 10 +     31915 CATTAG--------TTCA
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            5021 10 +      5267 CATTAG--------TTTA
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590235 10 - 189096842 CATTAG--------TTTA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             11766 10 -     12001 CATTAG--------TTTA
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002207 10 -  17673402 TATTAA--------TCTA
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334665 10 -   7040546 TATTAA--------TCTA
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  402948 10 -   1652518 TATTAA--------TCTA
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17799002  8 -  60362399 TATTAA--------CA--
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    185059  8 -    185531 TATTAA--------CA--
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034445  8 -   9314153 TATTAA--------CA--
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17958710  8 -  59632846 TATTAA--------CA--
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18500222  8 +  63665305 TATTAA--------CA--
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                     938 18 -     12242 CAGTAATTTACTAATTTA
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007247396.1                           201251 10 +    308752 TATTAa--------ttta
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                4674 10 -     11696 TATtaa--------tcaa
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 267
s Castor_canadensis.CasCan_scaffold_2074                    136997  6 +    179628 ----AA--------TTTA
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     92838 10 +    217609 TATTAA--------TTTA
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          9680 10 -     11392 CATTAG--------TTTA
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               5778 10 -      7577 CATTAG--------TTTA
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25651808 10 +  26074798 CATTAG--------TTTA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_398305                                 1384 10 +      1777 CATTAG--------TTTA
i Cebus_olivaceus.k141_398305                            C 0 C 0
s Cebus_unicolor.k141_544048                                 49721 10 -     74725 CATTAG--------TTTA
i Cebus_unicolor.k141_544048                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         5257 10 +     31688 TATTAA--------TTTA
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12231264 10 +  27778364 TATTAA--------TCTA
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2291 10 -     25243 TATTAA--------TCTA
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4475460 10 +   4669795 CATTAG--------TTTA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        14005 10 -     19203 CATTAG--------TTTA
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3342297                            621 10 -     14043 CATTAG--------TTTA
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           8657 10 +     27781 CATTAG--------TTTA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         8822 10 -     20310 CATTAG--------TTTA
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          11801 10 +     29689 CATTAG--------TTTA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            6555 10 -     20078 CATTAG--------TTTA
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          14478 10 -     27936 CATTAG--------TTTA
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            3342 10 -     17152 CATTAG--------TTTA
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38816881 10 +  39242232 CATTAG--------TTTA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222573 10 -  21565898 CATTAG--------TTTA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       39691 10 -     53127 CATTAG--------TTTA
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        6960 10 +      7159 CATTAG--------TTTA
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14492 10 -     27947 CATTAG--------TTTA
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         14467 10 +     17596 CATTAG--------TTTA
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                           514 10 +     14005 CATTAG--------TTTA
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             370  5 -      8501 CGTTA-------------
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             20950 10 -     52598 CATTTA--------CTTG
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16315 10 +     57038 CATTTA--------CTTG
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1252691 10 +   2543920 CAGTAA--------TTTA
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2813271                          10932 10 +     11226 CATTAG--------TTTA
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18428451 10 -  18827391 CATTAG--------TTTA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       14888 10 -     50209 CATTAG--------TTTA
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135421888 10 + 135778131 CATTAG--------TTTA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 18148  5 +     19366 TATTA-------------
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            173224  5 +    839153 CATTA-------------
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1910393 10 +   2368649 CATTAG--------TTTA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_polykomos.k141_906115                              36931 10 +     84244 CATTAG--------TTTA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17547932 10 -  53390261 TATTAC--------TCTA
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14249 10 -     20389 TATTAA--------TCGA
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 50018 10 +     63868 CATTAG--------TATA
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11667522 10 + 224834208 CACCAA--------TTTA
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               2803 10 -     19598 TATTTA--------TCTA
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28322 10 -     87169 TATTAG--------TATA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    836993 10 +   1526836 CATTGA--------TTTG
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35642 18 +     51376 CATTAATTTAGTAAATTA
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            63377  5 +   2246927 CATTA-------------
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537179 10 -  12879189 CATTTA--------CTTA
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8629689 10 +  20541912 TATTAA--------TCAA
i Desmodus_rotundus.KZ672289.1                           C 0 I 266
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673115 10 +   1390856 TATTAA--------TCTA
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    5867 10 +    198055 TATTAA--------TCTA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36284 10 +     67921 CAATAA--------TTTA
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Echinops_telfairi.JH980293.1                            48780249 10 + 111700974 CACCAA--------CCTA
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.KE759718.1                                  10359 10 +     11740 TATTAA--------TCTA
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1097550 10 +  10337057 CATTAA--------CCTA
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          20255 10 -    110024 CACTAA--------CTTA
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                             386 10 +      8657 CACTAA--------TTTA
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16329154 10 -  41312741 TATTGA--------CACA
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2145548 10 -  14770903 TATTAA--------TCTA
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1283383 10 +   4378816 TATTAA--------TCTA
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18531204 10 -  39960074 TATTAA--------TCTA
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               33232 10 +    498745 TATTAA--------TCTA
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3328097 10 -   7059049 TATTAA--------CTAA
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21205058 10 -  21539334 CATTAG--------TTTA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13675 10 -     14127 CATTTA--------CTTA
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6378 10 -     16928 CATTTA--------CTTA
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15402 10 -     25546 CATTTA--------CTTA
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12606 10 +     26330 CATTTA--------CTTA
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 13841 10 +     23973 CATTTA--------CTTA
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12603 10 +     75513 CATTTA--------CTTA
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10533 10 +     97555 CATTTA--------CTTA
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            13465 10 +     26496 CATTTA--------CTTA
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4077 10 -     17153 CATTTA--------CTTA
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13650 10 +    111500 CATTTA--------CTTA
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20236803 10 + 206538554 TATTAA--------TATA
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195646 10 + 205367284 TATTAA--------TATA
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  9394 10 -     36744 TATTGA--------TATA
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             850331 10 +   3816255 CCTTAA--------TTTA
i Fukomys_damarensis.KN121974.1                          I 1065 C 0
s Galago_moholi.ctg2040                                     426524 10 -    453645 CAGTAA--------CTTA
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4215 10 +     11339 CAATAA--------CTTA
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            1528 10 +     41679 CAGTAA--------CTTA
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1054  9 -      9135 -ATTAA--------TTTA
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              15839 10 -     32273 CATTAG--------TTTA
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186337985 10 + 186649187 CATTAG--------TTTA
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6713 10 -     19426 CATTTA--------CTTA
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             11862 10 -     15286 CATTTA--------CTTA
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13501 10 +     18253 CATTTA--------CTTA
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13602 10 -     41752 CATTTA--------CTTA
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13439 10 -     16460 CATTTA--------CTTA
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242156 10 +    327341 TATTAA--------TATA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20662114 10 +  22651954 CATTAA--------TTTA
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                 729 10 +      7595 CATTAA--------CCTA
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hoolock_leuconedys.ctg274                                    434651 10 +    630532 CATTAG--------TTTA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  44850 10 +     55795 TATTAA--------TATA
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      82825 10 +    135385 CATTAA--------TTTA
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7520760 10 -   7955117 tcttat--------ttta
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   22392 10 +     31101 CATTTA--------CTTG
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8276749 10 -   9596543 CTCTAA--------TAAG
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    13964 10 -     42476 TATTAA--------TCTA
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15523954 10 -  30322482 CATTTA--------CTTA
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7317 10 +     64341 CATTAG--------TTTA
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           4640 10 +      4941 CATTAG--------TTTA
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        7358 10 +     35603 CATTAG--------TTTA
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    28829 10 +     38576 CATTAG--------TTTA
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         25526 10 +     66356 CATTAG--------TTTA
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         10852 10 -     23766 CATTTA--------CTTG
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             28913 10 +     45836 CATTTA--------CTTG
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1449 10 +     25010 CATTTA--------CTTG
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      26849 10 +     54090 CATTTA--------CTTG
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3042680 10 +   3914936 TATTGA--------CATA
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6331 10 -     14121 CATTAA--------TCTA
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437007 10 +   1826925 CATTAG--------TTTA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5772 10 +     11245 CAGTAA--------CTTA
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004592 10 +   6120653 CAGTAA--------CTTA
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4217157 10 -  43346337 CATTAA--------TCTA
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17954950  8 -  59628241 TATTAA--------CA--
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               6817 10 +     40492 CATTAG--------TTTA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59676076 10 +  60120075 CATTAG--------TTTA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 12589 10 -     26193 CATTAG--------TTTA
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            80373 10 -    114318 CATTAG--------TTTA
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  6064 10 -     23192 CATTAG--------TTTA
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                15533 10 -     29190 CATTAG--------TTTA
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  24098 10 +     37952 CATTAG--------TTTA
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186839187 10 + 187317192 CATTAG--------TTTA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25457750 10 -  25927173 CATTAG--------TTTA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  79946 10 +     89720 CATTAG--------TTTA
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 6947 10 +     20474 CATTAG--------TTTA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   6747 10 -     14993 CATTAG--------TTTA
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  329613 10 -    668171 CATTAG--------TTTA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 5063 10 -     24072 CATTAG--------TTTA
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               25685 10 -     45290 CATTAG--------TTTA
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90458 10 +     94391 TATTAA--------TCTA
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23937280 10 -  24302211 CATTAG--------TTTA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               351408 10 +    752769 CATTAG--------TTTA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33102956 10 -  40650429 tgttat--------ttta
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        10167 10 -    207569 TATTAA--------TCCA
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              9880 10 +     13704 TATTGA--------TACA
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 32698 10 +    140813 CACTAA--------TTTA
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12182200 10 -  29670104 AACTAA--------TTTA
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                5595 10 -      7380 CATTAG--------TTTA
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               4668 10 +     18990 CATTAG--------TTTA
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      5607 10 -      7356 CATTAG--------TTTA
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18291374 10 -  93316391 CATTTA--------CTTG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    21987 10 -    145209 CACCCA--------TCTA
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                15217 10 -     19307 TAttaa--------tcaa
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 270
s Microtus_ochrogaster.CM001695.1                         11260434 10 -  27267610 CATTAA--------CTTA
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850464  9 +   8254450 -GTTAA--------TCTA
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34141  9 +     64694 -GTTAA--------TCTA
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9005 10 -     28506 CATTAG--------TTTA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         5548 10 -      8324 TATTGA--------TATA
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      8919 10 -     37649 CATTTA--------CTTG
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141173 10 -    366855 Tattaa--------tcta
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 274
s Mungos_mungo.MunMun_flattened_line_23663                   35255 10 +     37127 TCTTAG--------TATA
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           6643 10 +     14753 TATTAA--------TCTA
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84361316 10 - 120012414 CACTAA--------TTTA
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87650314 10 - 129401213 CACTAA--------TTTA
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31354973 10 -  89631738 CACTAA--------TTTA
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90752375 10 - 130317789 CACTAA--------TTTA
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               301071 10 -  14710649 TATTGA--------CACA
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71131 14 -     80779 ----ATTTCAGTAATTTA
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 8 C 0
s Myotis_brandtii.KE162005.1                                280288 10 -  10118263 TATTAA--------TCTG
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1587556 10 -   6019432 TATTAA--------TCTA
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3903642 10 -   4330536 TATTAA--------TCTA
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_482318                         316 10 -       721 TATTAA--------TCTA
i Myotis_myotis.MyoMyo_scaffold_482318                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189099  5 +    196477 CATTA-------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2034009 10 -   3037898 tACCAA--------TTTT
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               14980 10 +     21681 CATTAG--------TTTA
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306802 10 +  31847680 TATTGA--------TATA
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149210 10 -   9404916 TATTAA--------TATA
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102579564 10 - 196305487 CGGCAA--------CTTA
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_771082                              1409 10 -      2667 CGGCAA--------CTTA
i Nycticebus_coucang.k141_771082                         C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105749992 10 + 199412804 CAGCAA--------CATA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Octodon_degus.JH651603.1                                  746724 18 +  11899542 TAGTAATTTAGTAATTTA
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                              506487 10 -   2017862 TATTGA--------TATA
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   25102 10 +     28053 CACTAA--------TTTA
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    80103 10 +    102263 CACTAA--------TTTA
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9675 10 -     18566 CATTAA--------ACTA
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147211 10 + 174332312 CATCAA--------TCTA
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462178 10 -    559221 TATTAA--------CATA
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4056 10 +      8798 CAGTAA--------CTTA
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696219 10 -   1103335 CAGTAA--------CTTA
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    43932 10 +     80009 CATTAG--------TTTA
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189142840 10 + 189151597 CATTAG--------TTTA
i Pan_troglodytes.CM009242.2                             C 0 I 10
s Panthera_onca.PanOnc_flattened_line_3271                  151008 10 +    230217 TATTAA--------TATA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                264214 10 +  18783137 TATTAA--------TATA
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4721093 10 -   8748460 TATTAA--------TATA
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183443030 10 + 183742232 CACTAG--------TTTA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             6728 10 +     20448 CACTAG--------TTTA
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563536 10 +  20919399 CACTAG--------TTTA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   5472 10 +     41871 CATTAG--------TTTA
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     8757 10 +     27711 CACTAG--------TTTA
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  8838 10 +      9205 CACTAG--------TTTA
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12489 10 -     78924 TATTAA--------TATA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10026 10 +     13100 CAGTAA--------CTTA
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8432 10 +     25941 CAGTAA--------CTTA
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18194729 10 -  18517816 CACTAA--------TTTA
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28028 10 -     29689 CCTTAA--------TTTA
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Piliocolobus_badius.k141_1234363                           43491 10 +     62158 CATTAG--------TTTA
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        38222 10 +     89929 CATTAG--------TTTA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            39638 10 +     51399 CATTAG--------TTTA
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14295876 10 -  14605196 CATTAG--------TTTA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189130974 10 + 189387572 CATTAG--------TTTA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570582 10 +   9816681 CATTAG--------TTTA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               73160 10 -     81375 CATTAG--------TTTA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              4980 10 +     19060 CATTAG--------TTTA
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 13184 10 -     22811 CATTAA--------CCTA
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2596634 10 -   4620579 CATTTA--------CTTA
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990615 10 +   2598838 CATTTA--------CCTG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          28927 10 +     38485 CATTTA--------CCTG
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                               970 10 -     13098 CATTTA--------CCCG
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26448 10 +     35766 CATTTA--------CCCG
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4635 10 -     24134 CATTTA--------CCCG
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28460 10 -     67325 CATTTA--------CCTG
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4683 10 -      6182 CATTTA--------CCTG
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            10335 10 -     21651 CACTAA--------TTTA
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            14512 10 -     21811 TCTTAA--------TCTA
i Pteronotus_parnellii.KE909381.1                        C 0 I 278
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40070 10 +     42204 TATTGA--------CACA
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22976618 10 +  28871421 TATTAA--------CCTA
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1359704 10 +   4952924 TATTAA--------TCTA
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20274159 10 -  38429054 TATTAA--------TATA
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             14989 10 -     91421 CATTAG--------TTTA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7609109 10 +   7812017 CATTAG--------TTTA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             14961 10 -     72585 CATTAG--------TTTA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53570582 10 +  90668790 CACTAA--------TTTA
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             6675 10 -     11128 CATTAG--------TTTA
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236030 10 - 195417433 CATTAG--------TTTA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7671680 10 +   7961872 CATTAG--------TTTA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87639 10 -     96226 TATTAA--------TCTA
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               7994 10 -      8359 CATTAG--------TTTA
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_imperator.k141_2524406                             1953 10 +      2197 CATTAG--------TTTA
i Saguinus_imperator.k141_2524406                        C 0 C 0
s Saguinus_inustus.k141_699149                               13372 10 +     13640 CCTTAG--------TTTA
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               8241 10 +      8564 CCTTAG--------TTTA
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469090 10 + 209938924 CATTAG--------TTTA
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 7799 10 -      9399 CCTTAG--------TTTA
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119950708 10 - 121099817 CATTAG--------TTTA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23164 10 +     46362 CATTAG--------TTTA
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               23259 10 +     45824 CATTAG--------TTTA
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             39887 10 -     64574 CATTAG--------TTTA
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               2893 10 -     23631 CATTAG--------TTTA
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 23155 10 -     61129 CATTAG--------TTTA
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420479 10 -   5703754 CATTAG--------TTTA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          55520 10 -     80660 CATTAG--------TTTA
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153047 10 -    313613 TATTAA--------TCTA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          19500 10 -     19888 CATTAG--------TTTA
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26703 10 +     39453 CATTAG--------TTTA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            7222 10 +     27826 CATTAG--------TTTA
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             6743 10 -     19483 CATTAG--------TTTA
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      6811 10 +      7198 CATTAG--------TTTA
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         15069 10 +     15514 CATTAG--------TTTA
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11839 10 -     12148 CATTAA--------TTTA
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               3623 10 +   1910179 TATTAT--------TGTA
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13650859  9 -  18376816 -TTTCA--------TCTA
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1953811 10 -   3870691 tgttat--------ttta
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30576 10 +     97271 TATTGA--------TACA
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              18156 10 -    196729 TATTAG--------TATA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6810332 10 +  69701581 tattca--------ttta
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                10633 10 +     41958 TATTAA--------TATA
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72469  5 +    116680 CATTA-------------
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118587 10 -    156842 TATTAA--------TCTA
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387046 10 +    539355 TATTAA--------TCTA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               26259 10 +     70052 TATTAA--------TTTA
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1092 10 -     16117 TATTAA--------TTTA
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428400 10 + 186847797 CATTAG--------TTTA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105330 10 +    114563 CATTAA--------TTTA
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   6271  5 +      8208 CATTA-------------
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     80764 10 +    610378 TATTAA--------tcaa
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 268
s Trachypithecus_auratus.k141_722599                         10794 10 -     20410 CATTAG--------TTTA
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    14988 10 +     15221 CATTAG--------TTTA
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                       10895 10 +     19930 CATTAG--------TTTA
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       7322 10 -     19997 CATTAG--------TTTA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            47446 10 -     60166 CATTAG--------TTTA
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        14917 10 -     27529 CATTAG--------TTTA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     14861 10 -     18194 CATTAG--------TTTA
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           8589 10 -     21137 CATTAG--------TTTA
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    7292 10 -     10723 CATTAA--------TTTA
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         6448 10 +      9834 CATTAG--------TTTA
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        24761 10 +     32220 CATTAG--------TTTA
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5938863 10 +   6242583 CATTAG--------TTTA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        8115 10 +     20839 CATTAG--------TTTA
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4293095 10 +  10818551 CATTAA--------CCTA
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2155521  9 +   4065304 -ATTCA--------TTTA
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9172  9 -     10553 -ATTCA--------TTTA
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   53156 10 -     77625 CATTAA--------TCTA
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4850276 10 -   5085361 TATTGA--------TACA
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  11294 10 +     50397 AATTTA--------CTTA
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11353 10 +     24756 CATTTA--------CTTA
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371710 10 -   5488506 TATTAA--------TCTA
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10623 10 -     43706 TATTAA--------CATA
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                           957 10 +    224448 CATTAA--------TTTA
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          5200 10 +     86975 TATTGA--------TATT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      14845 10 +     63895 CACTAA--------TGAG
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             1507 165 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Ochotona_princeps.JH802162.1                             1363382  0 +   3988456 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50341  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18352  0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Colobus_guereza.LG01                                   199948958  0 + 200372422 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6594 10 +     62944 GGC-AC-TATGA
s Acinonyx_jubatus.LLWD01001279.1                           827162  9 -   1699592 CA--AC-TATCA
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     70774 10 +     87051 GAA-AC-TACCA
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510425  9 -  29979442 GA--AC-TATGA
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             79195  9 -    347723 GA--AC-TACCA
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     74462 10 -     89534 TAA-AC-TACCA
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14525  8 -     52922 GAA-AC-T--GA
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         14461  8 -     28001 GAA-AC-T--GA
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          4957  8 -     18505 GAA-AC-T--GA
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           5811  8 -     12518 GAA-AC-T--GA
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              7275 10 +     51355 AAA-AC-TATGA
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                 397 10 -     36483 AAA-AC-TATGA
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_743489                               3463 10 -     45847 AAA-AC-TATGA
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_2469512                                  873 10 +      1018 AAA-AC-TATGA
i Alouatta_juara.k141_2469512                            C 0 I 126
s Alouatta_macconnelli.k141_918386                             396  5 -      9457 -------TATGA
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_3472759                            17969 10 -     18578 AAA-AC-TATGA
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              3368 10 +     47717 AAA-AC-TATGA
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             3468 10 -      3544 AAA-AC-TACGA
i Alouatta_puruensis.k141_1253230                        C 0 C 0
s Alouatta_seniculus.k141_117119                             14690  5 +     50774 -------TATGA
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185185  9 +    412891 ga--ac-taccA
i Anoura_caudifer.AnoCau_scaffold_1412                   I 270 C 0
s Aotus_azarae.k141_3104676                                  15310 10 -     33861 AAA-AC-TATGA
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            15330 10 -     34016 AAA-AC-TATGA
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297727 10 -   5030052 AAA-AC-TATGA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             15332 10 -     34685 AAA-AC-TATGA
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28456 10 -     47192 AAA-AC-TATGA
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      12516 10 +     20879 GAA-AC-TACCA
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       11400 10 +     14667 GAA-AC-TACCA
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4593  9 +     43469 ga--ac-TACCA
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 272 C 0
s Avahi_laniger.k141_765380                                  53581 10 -     92717 GAA-AC-TACCA
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54208 10 +     85213 GAA-AC-TACCA
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             5065 10 -     10423 AAA-AC-TATGA
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             24537 10 +     31915 AAA-AC-TATGA
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            5031 10 +      5267 AAA-AC-GATGA
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590245 10 - 189096842 AAA-AC-GATGA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             11776 10 -     12001 AAA-AC-GATGA
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002217  9 -  17673402 AA--GC-TACCA
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334675  9 -   7040546 AA--GC-TACCA
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  402958  9 -   1652518 AA--GC-TACCA
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17799010  9 -  60362399 GA--AC-TATCA
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    185067  9 -    185531 GA--AC-TATCA
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034453  9 -   9314153 GA--AC-TATCA
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17958718  9 -  59632846 GA--AC-TATCA
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18500230  9 +  63665305 GA--AC-TATCA
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                     956 10 -     12242 GAA-GC-TAACA
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007247396.1                           201261 10 +    308752 gaa-ac-tgcca
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                4951  9 -     11696 ga--ac-taCCA
i Carollia_perspicillata.CarPer_scaffold_92756           I 267 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137003 10 +    179628 AAA-AC-TACCA
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     92848  9 +    217609 GA--AC-TACCA
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          9690 10 -     11392 AAA-AC-TATGA
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               5788 10 -      7577 AAA-AC-TATGA
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25651818 10 +  26074798 AAA-AC-TATGA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_398305                                 1394 10 +      1777 AAA-AC-TATGA
i Cebus_olivaceus.k141_398305                            C 0 C 0
s Cebus_unicolor.k141_544048                                 49731 10 -     74725 AAA-AC-TATGA
i Cebus_unicolor.k141_544048                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         5267  9 +     31688 G-A-AC-TGCCA
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12231274  9 +  27778364 GA--AC-TACCA
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2301  9 -     25243 GA--AC-TACCA
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4475470  8 +   4669795 GAA-AC-T--GA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        14015  8 -     19203 GAA-AC-T--GA
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3342297                            631  8 -     14043 GAA-AC-T--GA
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           8667  8 +     27781 GAA-AC-T--GA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         8832  8 -     20310 GAA-AC-T--GA
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          11811  8 +     29689 GAA-AC-T--GA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            6565  8 -     20078 GAA-AC-T--GA
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          14488  8 -     27936 GAA-AC-T--GA
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            3352  8 -     17152 GAA-AC-T--GA
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38816891  8 +  39242232 GAA-AC-T--GA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222583  8 -  21565898 GAA-AC-T--GA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       39701  8 -     53127 GAA-AC-T--GA
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        6970  8 +      7159 GAA-AC-T--GA
i Cercopithecus_nictitans.k141_3278028                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14502  8 -     27947 GAA-AC-T--GA
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         14477  8 +     17596 GAA-AC-T--GA
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                           524  8 +     14005 GAA-AC-T--GA
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             375  7 -      8501 ----AC-TGCCA
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             20960 10 -     52598 AAA-AT-TACCA
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16325 10 +     57038 AAA-AT-TACCA
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1252701 10 +   2543920 GAA-AC-TACCA
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2813271                          10942 10 +     11226 AAG-AC-TATGA
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18428461  8 -  18827391 GAA-AC-T--GA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       14898  8 -     50209 GAA-AC-T--GA
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135421898  8 + 135778131 GAA-AC-T--GA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 18153  7 +     19366 ----AC-TGCCA
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            173229  7 +    839153 ----AC-TGCCA
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1910403  8 +   2368649 GAA-AC-T--GA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_polykomos.k141_906115                              36941  8 +     84244 GAA-AC-T--GA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17547942  9 -  53390261 GA--GC-TACCG
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14259  9 -     20389 GA--AC-TATCA
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 50028 10 +     63868 GAA-AC-TACCA
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11667532 10 + 224834208 GAA-AC-TACCA
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               2813 10 -     19598 GA--ACTTAACA
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28332  9 -     87169 GA--AC-TATCA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837003 10 +   1526836 GAA-AC-GACCA
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35660 10 +     51376 GAT-AC-TACCT
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            63382  7 +   2246927 ----AC-TGCCA
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537189 10 -  12879189 GAA-AC-TACCA
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8629965  9 +  20541912 CA--CC-TACCA
i Desmodus_rotundus.KZ672289.1                           I 266 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673125  9 +   1390856 GA--AC-TACCA
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    5877  9 +    198055 GA--AC-TACCA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36294 10 +     67921 GAA-AC-TACCA
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Echinops_telfairi.JH980293.1                            48780259  9 + 111700974 AA--AT-GCtca
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.KE759718.1                                  10369  9 +     11740 GA--AC-TCTCA
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1097560 10 +  10337057 GA-AAC-TGGCA
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          20265 10 -    110024 GAA-AC-TACCA
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                             396 10 +      8657 GAA-AC-TACCA
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16329164  9 -  41312741 GA--AC-TACCA
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2145558  8 -  14770903 -A--AC-CACCA
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1283393  9 +   4378816 GA--AC-TACCA
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18531214  9 -  39960074 GA--AC-TACCA
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               33242  9 +    498745 GA--AC-TACCA
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3328107  9 -   7059049 TA--AC-TACTA
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21205068  8 -  21539334 GAA-AC-T--GA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13685 10 -     14127 GAA-AC-TACCA
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6388 10 -     16928 GAA-AC-TACCA
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15412 10 -     25546 GAA-AC-TACCA
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12616 10 +     26330 GAA-AC-TACCA
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 13851 10 +     23973 GAA-AC-TACCA
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12613 10 +     75513 GAA-AC-TACCA
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10543 10 +     97555 GAA-AC-TACCA
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            13475 10 +     26496 GAA-AC-TACCA
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4087 10 -     17153 GAA-AC-TACCA
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13660 10 +    111500 GAA-AC-TACCA
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20236813  9 + 206538554 CA--AC-TATCA
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195656  9 + 205367284 CA--AC-TATCA
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  9404  9 -     36744 CA--AC-TATCA
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             850341 10 +   3816255 GAA-AC-TACCA
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg2040                                     426534 10 -    453645 GAA-AC-TACCA
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4225 10 +     11339 GAA-AC-TACCA
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            1538 10 +     41679 GAA-AC-TACCA
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1063 10 -      9135 GAA-AC-TACCG
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              15849 10 -     32273 GGC-AC-TATGA
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186337995 10 + 186649187 GGC-AC-TATGA
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6723 10 -     19426 GAA-AC-TATCA
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             11872 10 -     15286 GAA-AC-TACCA
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13511 10 +     18253 GAA-AC-TACCA
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13612 10 -     41752 GAA-AC-TACCA
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13449 10 -     16460 GAA-AC-TACCA
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242166  9 +    327341 GA--AC-TATCA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20662124 10 +  22651954 GAA-AC-TACCA
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                 739 10 +      7595 GA-AAC-AGCCA
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hoolock_leuconedys.ctg274                                    434661 10 +    630532 GAA-AC-TATGA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  44860  9 +     55795 GA--AC-TATCT
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      82835 10 +    135385 GAA-AC-TACCA
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 171
s Ictidomys_tridecemlineatus.JH393364.1                    7520770 10 -   7955117 aaa-ac-tacca
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   22402 10 +     31101 GAA-AC-TACCA
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8276759 10 -   9596543 GAA-AC-TACCA
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    13974  8 -     42476 -A--AC-CACCA
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15523964 10 -  30322482 GAA-AC-TACCA
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7327 10 +     64341 AAG-AC-TATGA
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           4650 10 +      4941 AAG-AC-TATGA
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        7368 10 +     35603 AAG-AC-TATGA
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    28839  8 +     38576 AAA-AC---TGA
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         25536  8 +     66356 AAA-AC---TGA
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         10862 10 -     23766 GAA-AC-TGCCC
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             28923 10 +     45836 GAA-AC-TGCCA
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1459 10 +     25010 GAA-AC-TGCCA
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      26859 10 +     54090 GAA-AC-TGCCA
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3042690  9 +   3914936 GA--AC-TACCA
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6341 10 -     14121 GAG-GC-TGCTG
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437017  8 +   1826925 GAA-AC-T--GA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5782 10 +     11245 GAA-AC-TACCA
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004602 10 +   6120653 GAA-AC-TACCA
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4217167 10 -  43346337 GA-AAC-TGCCA
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17954958  9 -  59628241 GA--AC-TATCA
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               6827  8 +     40492 GAA-AC-T--GA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59676086  8 +  60120075 GAA-AC-T--GA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 12599  8 -     26193 GAA-AC-T--GA
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            80383  8 -    114318 GAA-AC-T--GA
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  6074  8 -     23192 GAA-AC-T--GA
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                15543  8 -     29190 GAA-AC-T--GA
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  24108  8 +     37952 GAA-AC-T--GA
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186839197  8 + 187317192 GAA-AC-T--GA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25457760  8 -  25927173 GAA-AC-T--GA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  79956  8 +     89720 GAA-AC-T--GA
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 6957  8 +     20474 GAA-AC-T--GA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   6757  8 -     14993 GAA-AC-T--GA
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  329623  8 -    668171 GAA-AC-T--GA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 5073  8 -     24072 GAA-AC-T--GA
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               25695  8 -     45290 GAA-AC-T--GA
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90468  9 +     94391 GA--AC-TCTCA
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23937290  8 -  24302211 GAA-AC-T--GG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               351418  8 +    752769 GAA-AC-T--GA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              18352  3 +    737560 ---------TCC
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              50341  3 -    317179 ---------GCC
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33102966 10 -  40650429 aaa-ac-tacca
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        10177  9 -    207569 GA--AC-TACCA
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              9890  9 +     13704 GA--AG-CACCA
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 32708 10 +    140813 GAA-AC-TACCA
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12182210 10 -  29670104 GAA-AC-TACTA
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                5605 10 -      7380 AAA-AC-TATGA
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               4678 10 +     18990 AAA-AC-TATGA
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      5617 10 -      7356 AAA-AC-TATGA
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18291384 10 -  93316391 GAA-AC-TACCA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    21997  9 -    145209 AA--AT-GTCCA
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                15497  9 -     19307 ga--aC-CACCA
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 270 C 0
s Microtus_ochrogaster.CM001695.1                         11260444 10 -  27267610 GAA-AT-TATCA
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850473  9 +   8254450 GA--AC-TGCCA
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34150  9 +     64694 GA--AC-TGCCA
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9015  8 -     28506 GAA-AC-T--GA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         5558  9 -      8324 GA--AC-TACCA
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      8929 10 -     37649 GAA-AC-TACCG
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141457  9 -    366855 aa--AC-TACCA
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 274 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35265  9 +     37127 GA--AC-TATCA
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           6653  8 +     14753 -A--AC-CACTA
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84361326 10 - 120012414 GAA-AC-TACAA
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87650324 10 - 129401213 GAA-AC-TACAA
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31354983 10 -  89631738 GAA-AC-TACAA
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90752385 10 - 130317789 GAA-AC-TACAA
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               301081  9 -  14710649 AA--AC-TACCA
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71145 10 -     80779 GAA-AC-GACCA
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                280298  8 -  10118263 -A--AC-CACCA
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1587566  8 -   6019432 -A--AC-TACCA
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3903652  8 -   4330536 -A--AC-CACCA
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_482318                         326  8 -       721 -A--AC-CACCA
i Myotis_myotis.MyoMyo_scaffold_482318                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189104  7 +    196477 ----AC-TGCTA
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2034019 10 -   3037898 GAA-AT-TACCA
i Nannospalax_galili.KL204047.1                          C 0 I 12
s Nasalis_larvatus.k141_413338                               14990  8 +     21681 GAA-AC-T--GA
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306812  9 +  31847680 GA--AC-TACCA
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149220  9 -   9404916 GA--AC-TATCA
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102579574 10 - 196305487 GAA-AC-TACCA
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_771082                              1419 10 -      2667 GAA-AC-TACCA
i Nycticebus_coucang.k141_771082                         C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105750002 10 + 199412804 GAA-AC-TAACA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Octodon_degus.JH651603.1                                  746742 10 +  11899542 GAA-AC-Tagga
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                              506497  9 -   2017862 GA--AC-TACCA
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   25112 10 +     28053 GAA-AC-TACCA
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    80113 10 +    102263 GGA-AC-TGCCA
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9685 10 -     18566 GA-AAC-CACCA
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147221 10 + 174332312 GAG-GC-TGCTG
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462188  9 -    559221 GA--AC-TATCA
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4066 10 +      8798 GAA-AC-TACCA
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696229 10 -   1103335 GAA-AC-TACCA
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    43942 10 +     80009 GGC-AC-TATGA
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03001836.1                             29867 10 +     51860 GGC-AC-TATGA
i Pan_troglodytes.NBAG03001836.1                         I 350 I 46
s Panthera_onca.PanOnc_flattened_line_3271                  151018  9 +    230217 CA--AC-TATCA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                264224  9 +  18783137 CA--AC-TATCA
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4721103  9 -   8748460 CA--AC-TATCA
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183443040  8 + 183742232 GAA-AC-T--GA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             6738  8 +     20448 GAA-AC-T--GA
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563546  8 +  20919399 GAA-AC-T--GA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   5482  8 +     41871 GAA-AC-T--GA
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     8767  8 +     27711 GAA-AC-T--GA
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  8848  8 +      9205 GAA-AC-T--GA
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12499  9 -     78924 TA--AC-TACCA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10036 10 +     13100 GAA-AC-TACCA
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8442 10 +     25941 GAA-AC-TACCA
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18194739 10 -  18517816 GGA-AC-TGCCA
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28038 10 -     29689 GAA-AC-TACCC
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Piliocolobus_badius.k141_1234363                           43501  8 +     62158 GAA-AC-T--CA
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        38232  8 +     89929 GAA-AC-T--CA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            39648  8 +     51399 GAA-AC-T--CA
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14295886  8 -  14605196 GAA-AC-T--GA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189130984 10 + 189387572 GAA-AC-TATGA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570592 10 +   9816681 GAA-AC-TATGA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               73170  8 -     81375 GAA-AC-T--GA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              4990  8 +     19060 GAA-AC-T--GA
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 13194 10 -     22811 GA-AAC-AGCCA
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2596644 10 -   4620579 GAA-AC-TACCA
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990625 10 +   2598838 GAA-AC-TATCA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          28937 10 +     38485 GAA-AC-TATCA
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                               980 10 -     13098 GAA-AC-TATCA
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26458 10 +     35766 GAA-AC-TATCA
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4645 10 -     24134 GAA-AC-TATCA
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28470 10 -     67325 GAA-AC-TATCA
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4693 10 -      6182 GAA-AC-TATCA
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            10345 10 -     21651 GAA-AC-TACCA
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            14800  9 -     21811 GA--AC-GACCA
i Pteronotus_parnellii.KE909381.1                        I 278 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40080  9 +     42204 GA--AC-TACCA
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22976628  9 +  28871421 GA--AC-TCTCA
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1359714  9 +   4952924 GA--AC-TCTCA
i Pteropus_vampyrus.KN525825.1                           C 0 I 1745
s Puma_concolor.QAVW01001104.1                            20274169  9 -  38429054 CA--AC-TATCA
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             14999  8 -     91421 GAA-AC-T--GA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7609119  8 +   7812017 GAA-AC-T--GA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             14971  8 -     72585 GAA-AC-T--GA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53570592 10 +  90668790 GAA-AC-TATCA
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             6685  8 -     11128 GAA-AC-T--GA
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236040  8 - 195417433 GAA-AC-T--GA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7671690  8 +   7961872 GAA-AC-T--GA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87649  9 -     96226 GA--GC-TCTCA
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               8004 10 -      8359 AAG-AC-TATGA
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_imperator.k141_2524406                             1963 10 +      2197 AAG-AC-TATGA
i Saguinus_imperator.k141_2524406                        C 0 C 0
s Saguinus_inustus.k141_699149                               13382 10 +     13640 AAG-AC-TATGA
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               8251 10 +      8564 AAG-AC-TATGA
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469100 10 + 209938924 AAG-AC-TATGA
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 7809  8 -      9399 AAG-AC---TGA
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119950718 10 - 121099817 AAA-AC-TATGA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23174 10 +     46362 AAA-AC-TATGA
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               23269 10 +     45824 AAA-AC-TATGA
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             39897 10 -     64574 AAA-AC-TATGA
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               2903 10 -     23631 AAA-AC-TATGA
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 23165 10 -     61129 AAA-AC-TATGA
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420489 10 -   5703754 AAA-AC-TATGA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          55530 10 -     80660 AAA-AC-TATGA
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153057  9 -    313613 GA--AC-TACCA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          19510  8 -     19888 GAA-AC-T--GA
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26713  8 +     39453 GAA-AC-T--GA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            7232  8 +     27826 GAA-AC-T--GA
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             6753  8 -     19483 GAA-AC-T--GA
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      6821  8 +      7198 GAA-AC-T--GA
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         15079  8 +     15514 GAA-AC-T--GA
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11849 10 -     12148 GAA-AC-TATCA
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               3633  9 +   1910179 GC--GC-TACCA
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13650868  9 -  18376816 GA--AC-TACCA
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1953821 10 -   3870691 aaa-ac-tacca
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30586  9 +     97271 AA--GG-TACCA
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              18166  9 -    196729 GA--AC-TATGA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6810342  9 +  69701581 ga--aa-taCTA
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                10643  9 +     41958 GA--AC-TACCA
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72474  7 +    116680 ----AC-TGCTA
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118597  9 -    156842 GA--AC-CACCA
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387056  9 +    539355 GA--AC-CACCA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               26269 10 +     70052 GAA-AC-TGCCA
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1102 10 -     16117 GAA-AC-TGCCA
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428410  8 + 186847797 GAA-AC-T--GA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105340 10 +    114563 GAA-AC-TACCC
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   6276  7 +      8208 ----AC-TGCCA
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Trachypithecus_auratus.k141_722599                         10804  8 -     20410 GAA-AC-T--GA
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    14998  8 +     15221 GAA-AC-T--GA
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                       10905  8 +     19930 GAA-AC-T--GA
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       7332  8 -     19997 GAA-AC-T--GA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            47456  8 -     60166 GAA-AC-T--GA
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        14927  8 -     27529 GAA-AC-T--GA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     14871  8 -     18194 GAA-AC-T--GA
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           8599  8 -     21137 GAA-AC-T--GA
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    7302  8 -     10723 GAA-AC-T--GA
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         6458  8 +      9834 GAA-AC-T--GA
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        24771  8 +     32220 GAA-AC-T--GA
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5938873  8 +   6242583 GAA-AC-T--GA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        8125  8 +     20839 GAA-AC-T--GA
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4293105 10 +  10818551 GA-AAC-TGCCA
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2155530 10 +   4065304 ACG-AC-TCTCA
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9181 10 -     10553 ACG-AC-TCTCA
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   53166  9 -     77625 AC--AG-TACCA
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4850286  9 -   5085361 GA--AC-TATAA
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  11304 10 +     50397 GAA-AC-TACCA
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11363 10 +     24756 GAA-AC-TACCA
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371720  9 -   5488506 AA--GC-TACCA
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10633  9 -     43706 GA--AC-TATCA
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                           967 10 +    224448 GAA-AC-TACCA
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          5210  9 +     86975 GA--AC-TACCA
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      14855 10 +     63895 GAA-AC-TACCA
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     80774 268 +    610378 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             1507 165 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Ochotona_princeps.JH802162.1                             1363382  0 +   3988456 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Colobus_guereza.LG01                                   199948958  0 + 200372422 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6604 46 +     62944 C--------AATTTGTCA-ACCAATATTGCCAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
s Acinonyx_jubatus.LLWD01001279.1                           827171 46 -   1699592 G--------AATTCCTCA-ACTAATATTGACAAcacaggc------------aa----------g--g-a------gaa-aat--ctgT
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     70784 38 +     87051 G--------AATTTCTCA-TACAACATAG-----ACA----------------C----------A-AG-G------GCA-AAT--ATGT
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510434 46 -  29979442 G--------AATTTCTCA-ACCAATATTGCCAACACAGAC------------AA----------G--G-A------GAA-AGC--TTGT
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             79204 46 -    347723 G--------AATTTCTCA-ACCAATATTGCCAACACAGAC------------AA----------G--G-A------GAA-AGT--CTGT
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     74472 46 -     89534 G--------AATTTCTCA-AACAATATAGCAAACATAGAT------------AA----------A--A-G------GAA-AAT--ATTT
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14533 46 -     52922 T--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         14469 46 -     28001 T--------AATTTCTCA-ACCAATATTGACAACGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          4965 46 -     18505 T--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           5819 46 -     12518 T--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              7285 46 +     51355 G--------AATTTCTCA-ACCAATACTGCCAATGCAGAC------------AA----------G--A-G------GGA-AAA--CCGT
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                 407 46 -     36483 G--------AATTTCTCA-ACCAATACTGCCAATGCAGAC------------AA----------G--A-G------GGA-AAA--CCGT
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_743489                               3473 31 -     45847 G--------AATTTCTCA-ACCAATACTGCCAATGCAGAC-------------------------------------------------
i Alouatta_discolor.k141_743489                          C 0 I 13
s Alouatta_juara.k141_1509701                                24676 46 +     25266 G--------AATTTCTCA-ACCAATACTGCCAATGCAGAC------------AA----------G--A-G------GGA-AAA--CCGT
i Alouatta_juara.k141_1509701                            I 13 C 0
s Alouatta_macconnelli.k141_918386                             401 46 -      9457 G--------AATTTCTCA-ACCAATACTGCCAATGCAGAC------------AA----------G--A-G------GGA-AAA--CCGT
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_3472759                            17979 46 -     18578 G--------AATTTCTCA-ACCAATACTGCCAATGCAGAC------------AA----------G--A-G------GGA-AAA--CCGT
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              3378 46 +     47717 G--------AATTTCTCA-ACCGATACTGCCAATGCAGAC------------AA----------G--A-G------GGA-AAA--CCGT
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_1253230                             3478 46 -      3544 G--------AATTTCTCA-ACCAATACTGCCAATGCAGAC------------AA----------G--A-G------GGA-AAA--CCGT
i Alouatta_puruensis.k141_1253230                        C 0 N 0
s Alouatta_seniculus.k141_117119                             14695 46 +     50774 G--------AATTTCTCA-ACCAATACTGCCAATGCAGAC------------AA----------G--A-G------GGA-AAA--CCGT
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185194 45 +    412891 G--------AATTTCTCA-ATCCATGTTACCAACATAGAT------------AA----------G--A-G------GAA-GA---CTGT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  15320 46 -     33861 G--------AATTTCTCA-ACCAATACTGCCAATGCAGAC------------AA----------G--A-G------GGA-AAA--CCGT
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            15340 46 -     34016 G--------AATTTCTCA-ACCAATACTGCCAATGCAGAC------------AA----------G--A-G------GGA-AAA--CCGT
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297737 46 -   5030052 G--------AATTTCTCA-ACCAATACTGCCAATGCAGAC------------AA----------G--A-G------GGA-AAA--CCGT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             15342 46 -     34685 G--------AATTTCTCA-ACCAATACTGCCAATGCAGAC------------AA----------G--A-G------GGA-AAA--CCGT
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28466 46 -     47192 G--------AATTTCTCA-ACCAATACTGCCAATGCAGAC------------AA----------G--A-G------GGA-AAA--CCGT
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      12526 46 +     20879 G--------AATTTCTAA-ACCAATACTGCCAACACAGAC------------AA----------G--A-G------GGG-AAT--TCAT
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       11410 46 +     14667 G--------AATTTCTCA-ACAGATATTTCCAACACAGAA------------AA----------A--A-G------GGA-AAC--CTGT
i Arctocebus_calabarensis.k141_2318572                   C 0 I 7
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4602 46 +     43469 G--------AACTTCTCA-ATCCATGTTGCCAACACAAAT--C---------AA----------A--A-G------GAA-AA---CTGT
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  53591 46 -     92717 G--------AATTTCTCA-ACCAATATTTCCAAGACAGAC------------AA----------A--A-G------GGA-AAC--CTGG
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54218 46 +     85213 G--------AATTTCTCA-ACCAATATTTCCAAGACAGAC------------AA----------A--A-G------GGA-AAC--CTGG
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             5075 46 -     10423 G--------AATTTCTCA-ACCATTACTGGCAGTGCAAAC------------AA----------G--G-G------GGA-AAA--CCGT
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             24547 46 +     31915 G--------AATTTCTCA-ACCAATACTGCCAGTGCAAAC------------AA----------G--G-G------GGA-AAA--CCGT
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            5041 46 +      5267 G--------AATTTCTCA-ACCATTACTGCCAGTGCAAAC------------AA----------G--G-G------GGA-AAA--CCGT
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590255 46 - 189096842 G--------AATTTCTCA-ACCATTACTGCCAGTGCAAAC------------AA----------G--G-G------GGA-AAA--CCGT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             11786 46 -     12001 G--------AATTTCTCA-ACCATTACTGCCAGTGCAAAC------------AA----------G--G-G------GGA-AAA--TCAT
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002226 46 -  17673402 G--------AACTTCTCA-GCCCATATTGACAACACAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334684 46 -   7040546 G--------AACTTCTCA-GCCCATATTGACAACACAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  402967 46 -   1652518 G--------AACTTCTCA-GCCCATATTGACAACACAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17799019 46 -  60362399 G--------AATTTCTCA-ACCAATATTGCCCACAAAGAC------------AA----------G--G-A------GAA-AGC--CTGT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    185076 46 -    185531 G--------AATTTCTCA-ACCAATATTGCCCACAAAGAC------------AA----------G--G-A------GAA-AGC--CTGT
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034462 46 -   9314153 G--------AATTTCTCA-ACCAATATTGCCCACAAAGAC------------AA----------G--G-A------GAA-AGC--CTGT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17958727 46 -  59632846 G--------AATTTCTCA-ACCAATATTGCCCACAAAGAC------------AA----------G--G-A------GAA-AGC--CTGT
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18500239 46 +  63665305 G--------AATTTCTCA-ACCAATATTGCCCACAAAGAC------------AA----------G--G-A------GAA-AGC--CTGT
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                     966 34 -     12242 A--------AATTT-TCA-AACAACATTGCCAATGCAGAA------------AA----------C--A---------------------
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 10
s Carlito_syrichta.NW_007247396.1                           201271 46 +    308752 c--------agtTTTTCA-ACCAGCATTGCCAACAAAGAT------------GA----------G--A-A------GAA-AAC--CAGT
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                4960 46 -     11696 G--------AATTTCTCA-ATCCATGTCGCCAACACAGGTT-----------AA----------G--A-G------GAA-AA---CTGT
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137013 42 +    179628 G--------AATTTCTCA-ACCAATATTGACA--ACAGAC------------AA----------G--A-G------AAA-AAT----GT
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     92857 45 +    217609 G--------AATTTCTCA-ACCAGTATTGCTGACATAGAC------------AA----------G--A-G------GGA-AA---CCGT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          9700 46 -     11392 G--------AATTTCTCA-ACCATTACTGCCAGTGCAAAC------------AA----------G--G-G------GGA-AAA--CCGT
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               5798 46 -      7577 G--------AATTTCTCA-ACCATTACTGCCAGTGCAAAC------------AA----------G--G-G------GGA-AAA--CCGT
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25651828 46 +  26074798 G--------AATTTCTCA-ACCAATAATGCCAATGCAGAC------------AA----------G--A-G------GGA-AAA--CCGT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_398305                                 1404 46 +      1777 G--------AATTTCTCA-ACCAATAATGCCAATGCAGAC------------AA----------G--A-G------GGA-AAA--CCGT
i Cebus_olivaceus.k141_398305                            C 0 C 0
s Cebus_unicolor.k141_544048                                 49741 46 -     74725 G--------AATTTCTCA-ACCAATAATGCCAATGCAGAC------------AA----------G--A-G------GGA-AAA--CCGT
i Cebus_unicolor.k141_544048                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         5276 46 +     31688 C--------AGTTTTTCA-ACCAGCATTGCCAACAAAGAT------------GA----------G--A-A------GAA-AAC--CAGT
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12231283 46 +  27778364 G--------AATTTCTCA-ACCAATGTTACCAACACAGAC------------AA----------G--A-G------AAA-AAC--CTGT
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2310 46 -     25243 G--------AATTTCTCA-ACCAATGTTACCAACACAGAC------------AA----------G--A-G------AAA-AAC--CTGT
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4475478 46 +   4669795 T--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        14023 46 -     19203 T--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3342297                            639 46 -     14043 T--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           8675 46 +     27781 T--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         8840 46 -     20310 T--------GATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          11819 46 +     29689 T--------GATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            6573 46 -     20078 T--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          14496 46 -     27936 T--------GATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-C------GGA-AAC--CTGT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            3360 46 -     17152 T--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38816899 46 +  39242232 T--------GATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222591 46 -  21565898 T--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       39709 46 -     53127 T--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_3278028                        6978 46 +      7159 T--------GATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Cercopithecus_nictitans.k141_3278028                   C 0 N 0
s Cercopithecus_petaurista.k141_807961                       14510 46 -     27947 T--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         14485 46 +     17596 T--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                           532 46 +     14005 T--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             382 46 -      8501 G--------AATTTCTCA-ACTAATATTACCAGAACAGGC------------AA----------G--A-G------GTA-AAC--CTGT
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             20970 46 -     52598 G--------AATTTCTCA-ACCAATATTTCCAACACAGGC------------AA----------G--A-G------GGA-AAC--CTGG
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16335 46 +     57038 G--------AATTTCTCA-ACCAATATTTCCAACACAGGC------------AA----------G--A-G------GGA-AAC--CTGG
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1252711 45 +   2543920 A--------AATTT-TCA-AACAACATAGCCAatgcagaa------------aa----------c--a-g------gaa-aat--ctaT
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2813271                          10952 46 +     11226 G--------AATTTCTCA-ACCAGTACTGCCAATGCAGAC------------AA----------G--G-A------GGA-AAA--CCAT
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18428469 46 -  18827391 T--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       14906 46 -     50209 T--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135421906 46 + 135778131 T--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 18160 46 +     19366 G--------AATTTCTGA-ACCAGTATTACCAATACAGAC------------AA----------G--A-G------GTA-AAC--CTGT
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            173236 46 +    839153 G--------AATTTCTCA-ACCAGTATTACCAATACAGAC------------AA----------G--A-G------GTA-AAC--CTGT
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1910411 46 +   2368649 C--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_polykomos.k141_906115                              36949 46 +     84244 C--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17547951 44 -  53390261 G--------CATTGCT---AGCAATATTACCAACACAGAC------------AA----------G--A-G------GAA-AAC--CTgt
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14268 46 -     20389 A--------AAATTTTCAAAT-CATATCATCAACACAGAC------------AA----------G--A-C------AAA-AAC--CTGT
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 12
s Cricetomys_gambianus.CriGam_scaffold_18520                 50038 24 +     63868 G--------AATTTCTGA-TACAATACAG-----ACA----------------A-----------------------------------
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 7
s Cricetulus_griseus.LT883664.1                           11667542 39 + 224834208 G--------AATTTCACA-TACCACatag-----aca----------------a----------aaaa-a------gaa-aat--ctgt
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               2823 38 -     19598 G--------AGTTTCTCC-AA-------------------TGCCCAACACAGAC----------C--A-G------AAA-ATC---TGT
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28341 45 -     87169 G--------AATTTCTCA-ATTAATAGTGACAACACAGAC------------AA----------G--G-G------GAAAAAT--CT--
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837013 46 +   1526836 G--------AATTTTTCA-AGCAATTTTGTCAAAACAGAA------------AA----------G--A-G------GCA-AAT--CCAT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35670 34 +     51376 A--------AATTT-TCA-AACAACTTTGCCAATGCAGAA------------AA----------C--A---------------------
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 10
s Dasypus_novemcinctus.JH564415.1                            63389 46 +   2246927 G--------GTTTTCTCA-ACTAATCTTATCAAAACAGGC------------AA----------G--A-G------GTA-AAC--TTGT
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537199 46 -  12879189 G--------AATTTCTCA-ATCAATATTTCCAACACAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8629974 45 +  20541912 G--------AATTTCTCA-ATCCATGTCGCTGACACAGAT------------AA----------G--A-G------GAA-AA---CTGT
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673134 46 +   1390856 G--------AATTTCTCA-ACCAATGTTGCCAACACAGAC------------AA----------G--A-G------AAA-AAC--CTGT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    5886 46 +    198055 G--------AATTTCTCA-ACCAATGTTGCCAACACAGAC------------AA----------G--A-G------AAA-AAC--CTGT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36304 45 +     67921 A--------ATTTT-TCA-AACAACATAGCCAATGCATAC------------AG----------C--A-G------GAA-AAT--CTAT
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Echinops_telfairi.JH980293.1                            48780268 45 + 111700974 g--------aatttataa-attaatatagttaacatagaa-------------a----------a--a-g------gaa-aac--ctaT
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.KE759718.1                                  10378 46 +     11740 G--------AATTTCTCA-GTCCACATCACCAACATAAAC------------AA----------G--A-G------GAA-AAC--TTGT
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1097570 46 +  10337057 G--------AATTTCTGA-ACTAGGATTACAAGTACAGAC------------AA----------A--A-G------GAA-AGC--CTAT
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          20275 37 -    110024 G--------AATTTCTCA-CACcatatag-----aca----------------a----------a--a-a------taa-aaa--ctgt
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                             406 37 +      8657 G--------AATTTCTCA-TATcatatag-----aca----------------a----------a--a-a------taa-aaa--ctgt
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16329173 46 -  41312741 G--------AATTTCTCA-AACAATATTGCCAACACGGAC------------AA----------G--A-A------GAA-AGG--CTGT
i Enhydra_lutris.KZ291758.1                              C 0 I 4
s Eptesicus_fuscus.JH977646.1                              2145566 45 -  14770903 G--------AATCTCTCA-ATCCATGTTGCCAACACAGAC------------AA----------G--A-G------GAA-AA---CTGT
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1283402 46 +   4378816 G--------AATTTCTCA-ACTAATGTTGCCAACACAGAC------------AA----------G--A-G------AAA-AAT--CTGT
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18531223 46 -  39960074 G--------AATTTCTCA-ACTAATGTTGCCAACACAGAC------------AA----------G--A-G------AAA-AAT--CTGT
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               33251 46 +    498745 G--------AATTTCTCA-ACTAATGTTGCCAACACAGAC------------AA----------G--A-G------AAA-AAT--CTGT
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3328116 38 -   7059049 G--------AATTT-TCA-ACCAATATtatcaaaacagac------------aa----------a--a-a------ata----------
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21205076 46 -  21539334 T--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------A--A-G------GGA-AAC--CTGT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13695 45 -     14127 G--------AATTTCTCA-ACCAATATTTCCAACACAGAC------------AA----------G--A-G------GGA-A-C--CTGT
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6398 45 -     16928 G--------AATTTCTCA-ACCAATATTTCCAACACAGAC------------AA----------G--A-G------GGA-A-C--CTGT
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15422 45 -     25546 G--------AATTTCTCA-ACCAATATTTCCAACACAGAC------------AA----------G--A-G------GGA-A-C--CTGT
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12626 45 +     26330 G--------AATTTCTCA-ACCAATATTTCCAACACAGAC------------AA----------G--A-G------GGA-A-C--CTGT
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 13861 45 +     23973 G--------AATTTCTCA-ACCAATATTTCCAACACAGAC------------AA----------G--A-G------GGA-A-C--CTGT
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12623 45 +     75513 G--------AATTTCTCA-ACCAATATTTCCAACACAGAC------------AA----------G--A-G------GGA-A-C--CTGT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10553 45 +     97555 G--------AATTTCTCA-ACCAATATTTCCAACACAGAC------------AA----------G--A-G------GGA-A-C--CTGT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            13485 45 +     26496 G--------AATTTCTCA-ACCAATATTTCCAACACAGAC------------AA----------G--A-G------GGA-A-C--CTGT
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4097 45 -     17153 G--------AATTTCTCA-ACCAATATTTCCAACACAGAC------------AA----------G--A-G------GGA-A-C--CTGT
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13670 45 +    111500 G--------AATTTCTCA-ACCAATATTTCCAACACAGAC------------AA----------G--A-G------GGA-A-C--CTGT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20236822 46 + 206538554 G--------AATTCCTCA-ACTAATATTGACAACACAGAC------------AA----------G--G-A------GAA-AAT--CTGT
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195665 46 + 205367284 G--------AATTCCTCA-ACTAATATTGACAACACAGAC------------AA----------G--G-A------GAA-AAT--CTGT
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  9413 46 -     36744 G--------AATTCCTCA-ACTAATATTGACAACACAGAC------------AA----------G--G-A------GAA-AAT--CTGT
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             850351 45 +   3816255 A--------ACTTT-TCA-AACACCATCACTAACacagaa------------aa----------t--g-a------gga-aac--atGA
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg2040                                     426544 46 -    453645 A--------AATTTCTCA-ACAAATATTTCCAACACAGAC------------AA----------G--A-A------GGA-AAC--CTAT
i Galago_moholi.ctg2040                                  C 0 I 7
s Galago_senegalensis.k141_631886                             4235 46 +     11339 A--------AATTTCTCA-ACAAATATTTCCAACACAGAC------------AA----------G--A-A------GGA-AAC--CTAT
i Galago_senegalensis.k141_631886                        C 0 I 7
s Galagoides_demidoff.k141_1711393                            1548 46 +     41679 A--------AATTTCTCA-ACAAATATTTCCAACACAGAC------------AA----------G--A-A------GGA-AAT--CTGT
i Galagoides_demidoff.k141_1711393                       C 0 I 7
s Galeopterus_variegatus.GalVar_scaffold_108840               1073 46 -      9135 A--------AAACTTTCA-ACCAATATTGCAAACACAGAC------------AA----------G--A-G------GGA-AAC--CTGC
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              15859 46 -     32273 C--------AATTTCTCA-ACCAATATTGCCAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186338005 46 + 186649187 C--------AATTTCTCA-ACCAATATTGCCAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6733 46 -     19426 G--------AATTTCTCA-ACCAATATTTCCCACACAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             11882 46 -     15286 G--------AATTTCTCA-ACCAATATTTCCCACACAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13521 46 +     18253 G--------AATTTCTCA-ACCAATATTTCCCACACAGAC------------AA----------A--A-G------GGA-AAC--CTGT
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13622 46 -     41752 G--------AATTTCTCA-ACCAATATTTCCCACACAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13459 46 -     16460 G--------AATTTCTCA-ACCAATATTTCCCACACAGAC------------AA----------A--A-G------GGA-AAC--CTGT
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242175 44 +    327341 G--------AATTTCTCA-ACTAATAGTGACAACACATAC------------AA----------G--G-A------GAA-AAT--CT--
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20662134 45 +  22651954 A--------AATTT-TCA-AACAACATTGCCAACACAGAA------------AA----------C--A-G------GGA-AAC--CCGT
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                 749 46 +      7595 G--------GATTTCCCA-ACCCATACTGCCAACATGGAC------------AA----------G--A-A------GAA-AAC--CTGT
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hoolock_leuconedys.ctg274                                    434671 46 +    630532 C--------AATTTCTCA-ACCAATATTGCCGATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  44869 44 +     55795 G--------AATTTCTCA-ACTAATAATGACAACACAGAC------------AA----------G--G-A------GAA-AAT--CT--
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83016 45 +    135385 a--------aattt-tca-aACAATATTGCCAACACAGAA------------AA----------C--A-G------GGA-AAC--CAGG
i Hystrix_cristata.HysCri_scaffold_5660                  I 171 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7520780 45 -   7955117 g--------AATTCCACA-ACAAATATTGCCAACACAGAT------------AA----------G--A-G------GGG-AA---CCAT
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   22412 46 +     31101 G--------AATCTCTCA-ACCAATATTTCCAACACAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8276769 46 -   9596543 G--------AATTTCTCA-AACAATATAGCCAACATAGAT------------AA----------g--a-g------gaa-aat--tttt
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    13982 45 -     42476 G--------AATCTCTCT-ATCCATGTTGCCAACACACAC------------AA----------G--A-G------GAA-AA---CTGT
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15523974 46 -  30322482 G--------AATTTCTCA-ACCAATATTTCCCACACAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7337 46 +     64341 G--------AATTTCTCA-ACCAGTACTGCCAATGCAGAC------------AA----------G--G-A------GGA-AAA--CCAT
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           4660 46 +      4941 G--------AATTTCTCA-ACCAGTACTGCCAATGCAGAC------------AA----------G--G-A------GGA-AAA--CCAT
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        7378 46 +     35603 G--------AATTTCTCA-ACCAGTACTGCCAATGCAGAC------------AA----------G--G-A------GGA-AAA--CCAT
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    28847 32 +     38576 G--------AATTTCTCA-ACCAATACTGCCAGTGCAAAC------------A------------------------------------
i Leontopithecus_chrysomelas.k141_1519602                C 0 I 11
s Leontopithecus_rosalia.k141_464620                         25544 32 +     66356 G--------AATTTCTCA-ACCAATACTGCCAGTGCAAAC------------A------------------------------------
i Leontopithecus_rosalia.k141_464620                     C 0 I 11
s Lepilemur_ankaranensis.k141_596936                         10872 46 -     23766 G--------AATTTCTCA-ACCAATATTTTCAACACAAAC------------AA----------G--A-G------GGA-AAC--CTGG
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             28933 46 +     45836 G--------AATTTCTCA-ACCAATATTTTCAACACAAAC------------AA----------G--A-G------GGA-AAC--CTGG
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1469 46 +     25010 G--------AATTTCTCA-ACCAGTATTTCCAACACAAAC------------AA----------G--A-G------GGA-AGC--CTGG
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      26869 46 +     54090 G--------AATTTCTCA-ACCAATATTTTCAACACAAAC------------AA----------G--A-G------GGA-AAC--CTGG
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3042699 46 +   3914936 G--------AATTTCTCA-ACCAATATTGCCAACACAGAC------------AA----------G--G-A------GAA-AGC--CTGT
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6351 45 -     14121 G--------AATTTCTCA-ACCAATATTGGCAGCACAGAC------------AA----------G--A-T------GAA-AAT--C-TT
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 2
s Lophocebus_aterrimus.ctg367                              1437025 46 +   1826925 T--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Lophocebus_aterrimus.ctg367                            C 0 I 8
s Loris_lydekkerianus.k141_2539221                            5792 46 +     11245 G--------AATTTCTCA-ACAAATATTTTGAATACAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Loris_lydekkerianus.k141_2539221                       C 0 I 7
s Loris_tardigradus.ctg83                                  1004612 46 +   6120653 G--------AATTTCTCA-ACAAATATTTTGAATACAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Loris_tardigradus.ctg83                                C 0 I 7
s Loxodonta_africana.GL010049.1                            4217177 46 -  43346337 G--------AATTTCTCA-ACCAATATTGCCAACATAGAC------------AA----------G--A-G------GAA-AAC--TTGT
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17954967 46 -  59628241 G--------AATTTCTCA-ACCAATATTGCCCACAAAGAC------------AA----------G--G-A------GAA-AGC--ctgt
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               6835 46 +     40492 C--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59676094 46 +  60120075 C--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 12607 46 -     26193 C--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            80391 46 -    114318 C--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  6082 46 -     23192 C--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                15551 46 -     29190 C--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  24116 46 +     37952 C--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186839205 46 + 187317192 C--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25457768 46 -  25927173 C--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  79964 46 +     89720 C--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 6965 46 +     20474 C--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   6765 46 -     14993 C--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  329631 46 -    668171 C--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 5081 46 -     24072 C--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               25703 46 -     45290 C--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90477 45 +     94391 G--------AATTTCTCA-A-TCTTATCACCAACACAAAC------------AA----------G--A-G------GAA-AAC--CTGT
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 6
s Mandrillus_leucophaeus.scaffold280                      23937298 46 -  24302211 T--------AATTTCTCA-ACCAATATCGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               351426 46 +    752769 T--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              18355 46 +    737560 A--------AATTTCTCA-GCCAATATTGCCAACATACAT------------AA----------G--A-G------GAA-AAC--CTGG
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              50344 46 -    317179 A--------AATTTCTCA-GCCAATATTGCCAACATAGAT------------AA----------G--A-G------GAA-AAC--CTGG
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33102976 45 -  40650429 G--------AATTCCACA-ACAAATATTGCCAACACAGAC------------AA----------G--A-G------GGG-AA---CCAT
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        10186 46 -    207569 G--------AATTTTTCAATT-TATATCACTAACACAGAC------------AA----------G--A-C------AAA-AAC--CTGA
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 12
s Mellivora_capensis.MelCap_flattened_line_69365              9899 46 +     13704 G--------AATTTCTCA-ACCAATATTGCCAACACAGAC------------AA----------G--A-A------GAA-AGG--CTGT
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 32718 44 +    140813 G--------AATTTTTCA-TACAACACTG-----ACA----------------A----------A-AA-AAAAAAAAAA-AAC--CTGT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12182220 37 -  29670104 G--------AATTTTTCA-TACC-tatag-----aca----------------a----------aa-a-a------gaa-aat--ctgt
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                5615 46 -      7380 G--------AATTTCTCA-ACCATTACTGGCAGTGCAAAC------------AA----------G--G-G------GGA-AAA--CCGT
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               4688 46 +     18990 G--------AATTTCTCA-ACCATTACTGGCAGTGCAAAC------------AA----------G--G-G------GGA-AAA--CCGT
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      5627 46 -      7356 G--------AATTTCTCA-ACCATTACTGGCAGTGCAAAC------------AA----------G--G-G------GGA-AAA--CCGT
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18291394 46 -  93316391 G--------AATTTATCA-ACCAATATTTCCAACACACAC------------AA----------G--A-G------GAA-AAC--CTGG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    22006 44 -    145209 G--------AATTT-TAA-ATCAATAATGCTAACATAGGA-------------A----------A--A-G------GAA-AAC--TTAT
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                15506 44 -     19307 G--------AATTTCTCG-ATCCATGTTGCCAACGCAGAT------------AA----------G--A-G------GAA-AA---CTG-
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11260454 37 -  27267610 G--------AATTTCTCA-TACcatatag-----aca----------------a----------a--a-a------taa-aat--ctgt
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850482 45 +   8254450 G--------AGTTTCTCA-ATCCACATCGCCAGCACAGGC------------AC----------A--G-G------AAA-AC---CTGT
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34159 45 +     64694 G--------AGTTTCTCA-ATCCATGTCGCCAGCACAGAC------------AC----------A--G-G------AAA-AC---CTGT
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9023 46 -     28506 T--------GATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         5567 46 -      8324 G--------AATTTCTCA-ACCAATATTGCCAACACAGAC------------AA----------G--A-A------GAA-AGC--CTGT
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      8939 46 -     37649 G--------AATTTATCA-ACCAATATTTCCAACACACAC------------AA----------G--A-G------GAA-AAC--CTGG
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141466 45 -    366855 G--------AATTTCTCA-ATCCATGTCACCAACACAGAT------------AA----------G--A-G------GAA-AA---CTGT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35274 44 +     37127 G--------AATTTCTCA-ACTAATAGTGACAACACATAC------------AA----------A--G-A------GAA-AAT--CT--
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           6661 45 +     14753 G--------AATCTCCCA-ATCCATGTTGCCAACACAGAC------------AA----------G--A-G------GAA-AA---CTAT
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84361336 36 - 120012414 G--------AAT-TCTCA-TTTAACGCAG-----ACA----------------A----------T--T-A------GAA-AAT--CTGT
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87650334 36 - 129401213 G--------AAT-TCTCA-TTTAACATAG-----ACA----------------A----------T--T-A------GAA-AAT--CTGT
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31354993 36 -  89631738 G--------AAT-TCTCA-TTTAacacag-----acc----------------a----------a--a-a------gaa-aat--CCGT
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90752395 36 - 130317789 G--------AAT-TCTCA-TTTAACATAG-----ACA----------------A----------T--T-A------GAA-AAT--CTGT
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               301090 46 -  14710649 G--------AATTTCTCA-AACAATATTGCCAACACGGAC------------AA----------G--A-A------GAA-AAG--Ctgt
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71155 45 -     80779 A--------CATTT-TCA-AAGAACATTGCCAATGCAGAA------------AA----------G--A-A------GGA-AAT--GTGC
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                280306 45 -  10118263 G--------AATCTCTCA-ATCCAGGTTGTCAACATGGAC------------AA----------G--A-G------GAA-AG---CTGT
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1587574 45 -   6019432 G--------AATCTCTCA-ATCCATGTTGCCAACACAGAC------------AA----------G--A-G------GAA-AG---CTGT
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3903660 45 -   4330536 G--------AATCTCTCA-ATCCATGTTGCCAACACAGAC------------AA----------G--A-G------GAA-AG---CTGT
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_482318                         334 45 -       721 G--------AATCTCTCA-ATCCATGTTGCCAACACAGAC------------AA----------G--A-G------GAA-AG---CTGT
i Myotis_myotis.MyoMyo_scaffold_482318                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189111 45 +    196477 G--------AATTT-TCA-ACCAATATTACCAATGCAGGT------------GA----------G--A-G------GTA-AAC--ATGT
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2034041 42 -   3037898 G--------AATTTCTCA-ACCTATATTGCTGACATA----------------G----------A--A-A------GAA-ACT--CTGT
i Nannospalax_galili.KL204047.1                          I 12 C 0
s Nasalis_larvatus.k141_413338                               14998 46 +     21681 C--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306821 46 +  31847680 G--------AATTTCTCA-ACCAATATTGCCAACACAGAC------------AA----------G--G-A------GAA-AGT--CTGT
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149229 46 -   9404916 G--------AATTTCTCA-ACCAATATTACCCACAAAGAC------------AA----------G--G-A------GAA-AGC--Ctgt
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102579584 45 - 196305487 G--------AATTTCTCA-ACAAATATTTCCAATACAGAC-------------A----------G--A-G------GGA-AAC--CTGT
i Nycticebus_bengalensis.LG01                            C 0 I 7
s Nycticebus_coucang.k141_771082                              1429 45 -      2667 G--------AATTTCTCA-ACAAATATTTCCAATACAGAC-------------A----------G--A-G------GGA-AAC--CTGT
i Nycticebus_coucang.k141_771082                         C 0 I 7
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105750012 46 + 199412804 G--------AATTTCTCA-ACAAATATTTCCAATACAGAC------------AA----------G--a-g------gga-aac--ctgt
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 7
s Ochotona_princeps.JH802162.1                             1363382 32 +   3988456 -----------------------AAGCTGGCAACACAGAC------------AA----------G--A-G------GAA-AGT-CT-GT
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  746752 54 +  11899542 a--------aattt-tca-aa---cattGCCAATGTTGTT------------AATGTTACCAATG--T-T------GGT-AATTACTGT
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                              506506 46 -   2017862 G--------AATTTCTCA-ACCAATATTGCCAACACAGAC------------AA----------G--G-A------GAA-AGC--CTGT
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   25122 37 +     28053 G--------AATTTCTCA-TACCATATGG-----ACA----------------A----------A--A-A------TAA-AAT--CTGC
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    80123 37 +    102263 G--------AATTTCTCA-TACCTCATAG-----ACA----------------A----------A--A-G------GAA-AAT--CTGT
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9695 46 -     18566 G--------AATTTCTCA-TCCACTATTTCCAAAACAGAT------------TA----------A--A-G------GAA-AAC--CTGT
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147231 45 + 174332312 G--------AATTTCTCA-ACCAGGACTGGCAGCACAGAC------------AA----------G--A-C------GAC-AAT--C-TT
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 2
s Otocyon_megalotis.JAEUCK010005147.1                       462197 46 -    559221 G--------AATTTCTCA-ACCAATATTGCCCACAAAGAC------------AA----------G--G-A------GAA-AGC--ctct
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 8
s Otolemur_crassicaudatus.k141_222918                         4076 46 +      8798 A--------AATTTCTCA-ACAAATATTTCCAACATAGAC------------AA----------G--A-A------GGA-AAC--CTAT
i Otolemur_crassicaudatus.k141_222918                    C 0 I 7
s Otolemur_garnettii.GL873799.1                             696239 46 -   1103335 A--------AAtttctca-acaaatatttccaaCACAGAC------------AA----------G--A-A------GGA-AAC--CTAT
i Otolemur_garnettii.GL873799.1                          C 0 I 7
s Pan_paniscus.KQ411613.1                                    43952 46 +     80009 C--------AATTTGTCA-ACCAATATTGCCAATGGAGAC------------AA----------G--A-A------GGA-AAC--CTGT
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189142860 46 + 189151597 C--------AATTTGTCA-ACCAATATTGCCAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Pan_troglodytes.CM009242.2                             I 10 I 216
s Panthera_onca.PanOnc_flattened_line_3271                  151027 33 +    230217 G--------AATTCCTCA-ACTAATATTGACAACACAGAC------------AA-----------------------------------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 10
s Panthera_pardus.KV860321.1                                264233 46 +  18783137 G--------AATTCCTCA-ACTAATATTGACAACACAGAC------------AA----------G--G-A------GAA-AAT--CTGT
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4721112 46 -   8748460 G--------AATTCCTCA-ACTAATATTGACAACACAGAC------------AA----------G--G-A------GAA-AAT--CTGT
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183443048 46 + 183742232 T--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             6746 46 +     20448 T--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563554 46 +  20919399 T--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   5490 46 +     41871 T--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     8775 46 +     27711 T--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  8856 46 +      9205 T--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12508 42 -     78924 A--------AATTTCTCA-ACTAATCTTGACAACAC----------------AA----------A--G-A------GAA-AAT--CTGT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10046 46 +     13100 G--------TATTTCTCA-ACAAATATTTCCAACACAGAA------------AA----------G--A-G------GGA-AAC--CTGT
i Perodicticus_ibeanus.k141_855320                       C 0 I 7
s Perodicticus_potto.k141_1092580                             8452 46 +     25941 G--------TATTTCTCA-ACAAATATTTCCAACACAGAA------------AA----------G--A-G------GGA-AAC--CTGT
i Perodicticus_potto.k141_1092580                        C 0 I 7
s Peromyscus_maniculatus.KI615324.1                       18194749 37 -  18517816 G--------AATTTCTCA-TACCACatag-----aca----------------a----------a--a-a------gaa-aat--ctgt
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28048 20 -     29689 ---------AATAT-TGA-AACAGCATTGTC----------------------------------------------------------
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 I 12
s Piliocolobus_badius.k141_1234363                           43509 46 +     62158 C--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        38240 46 +     89929 C--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            39656 46 +     51399 C--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14295894 46 -  14605196 C--------AATTTCTTA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189130994 46 + 189387572 C--------AATTTCTCA-ACCAATATTGCCAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570602 46 +   9816681 C--------AATTTCTCA-ACCAATATTGCCAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               73178 46 -     81375 C--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              4998 46 +     19060 C--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 13204 46 -     22811 G--------GATTTCCCA-ACCCATACTGCCAACATGGAC------------AA----------G--A-A------GAA-AAC--CTGT
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2596654 46 -   4620579 G--------AATTTCTCA-ACCAATATTTCCCACACAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990635 46 +   2598838 G--------AATTTCTCA-ACCAATATTTCCAAGACAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          28947 46 +     38485 G--------AATTTCTCA-ACCAATATTTCCAAGACAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                               990 46 -     13098 G--------AATTTCTCA-ACCAATATTTCCAAGACAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26468 46 +     35766 G--------AATTTCTCA-ACCAATATTTCCAAGACAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4655 46 -     24134 G--------AATTTCTCA-ACCAATATTTCCAAGACAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28480 46 -     67325 G--------AATTTCTCA-ACCAATATTTCCAAGACAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4703 46 -      6182 G--------AATTTCTCA-ACCAATATTTCCAAGACAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            10355 49 -     21651 GAATTCCAGAATTTTTCA-TACaacattg-----aca----------------a----------aa-a-a---aaaaaa-aat--ctgt
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            14809 45 -     21811 G--------AATTTCTCA-ACCCATGTCACcgacagagag------------aa----------g--a-g------gaa-aa---ctat
i Pteronotus_parnellii.KE909381.1                        C 0 I 110
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40089 46 +     42204 G--------AATTTCTCA-AACAATATTGCCAACACAGAC------------AA----------G--A-A------GAA-AGG--CTGT
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22976637 46 +  28871421 G--------AATTTCTCA-ATCCATATCACCAACGCAAAC------------AA----------G--A-G------GAA-AAC--TTGT
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                6690 46 -      8028 G--------AATTTCTCA-ATCCATATCACCAACGCAAAC------------AA----------G--A-G------GAA-AAC--TTGT
i Pteropus_vampyrus.KN534172.1                           I 4483 C 0
s Puma_concolor.QAVW01001104.1                            20274178 46 -  38429054 G--------AATTCCTCA-ACTAATATTGACAACACAGAC------------AA----------G--G-A------GAA-AAT--CTGT
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15007 46 -     91421 C--------AATTTCTCA-ACCAATACTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7609127 46 +   7812017 C--------AATTTCTCA-ACCAATACTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             14979 46 -     72585 C--------AATTTCTCA-ACCAATACTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53570602 30 +  90668790 G--------AAT-TCTca-tataaca---------------------------a----------a--a-a------gaa-aat--ctgt
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             6693 46 -     11128 C--------AATTTCTCA-ACCCATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236048 31 - 195417433 C--------AATTTCTCA-ACCCATATTGACAATGGAGAC-------------------------------------------------
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 13
s Rhinopithecus_strykeri.ctg102                            7671698 46 +   7961872 C--------AATTTCTCA-ACCCATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87658 46 -     96226 G--------AATTTCTCA-ATCCATATTACCAACATAAAT------------AA----------G--A-G------AAA-AAC--TTGT
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               8014 46 -      8359 G--------AATTTCTCA-ACCAGTACTGCCAATGCAGAC------------AA----------G--G-A------GGA-AAA--CCAT
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_imperator.k141_2524406                             1973 46 +      2197 G--------AATTTCTCA-ACCAGTACGGCCAATGCAGAC------------AA----------G--G-A------GGA-AAA--CCAT
i Saguinus_imperator.k141_2524406                        C 0 C 0
s Saguinus_inustus.k141_699149                               13392 46 +     13640 G--------AATTTCTCA-ACCAGTACGGCCAATGCAGAC------------AA----------G--G-A------GGA-AAA--CCAT
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               8261 46 +      8564 G--------AATTTCTCA-ACCAGTACGGCCAATGCAGAC------------GA----------G--G-A------GGA-AAA--CCAT
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469110 46 + 209938924 G--------AATTTCTCA-ACCAGTACTGCCAATGCAGAC------------AA----------G--G-A------GGA-AAA--CCAT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 7817 46 -      9399 G--------AATTTCTCA-ACCAGTACGGCCAATGCAGAC------------GA----------G--G-A------GGA-AAA--CCAT
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119950728 46 - 121099817 G--------AATTTCTCA-ACCAATATTGCCAATGCAGAC------------AA----------G--A-G------GGA-AAA--CCGT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23184 46 +     46362 G--------AATTTCTCA-ACCAATATTGCCAATGCAGAC------------AA----------G--A-G------GGA-AAA--CCGT
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               23279 46 +     45824 G--------AATTTCTCA-ACCAATATTGCCAATGCAGAC------------AA----------G--A-G------GGA-AAA--CCGT
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             39907 46 -     64574 T--------AATTTCTCA-ACCAATATTGCCAATGCAGAC------------AA----------G--A-G------GGA-AAA--CCGT
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               2913 46 -     23631 G--------AATTTCTCA-ACCAATATTGCCAATGCAGAC------------AA----------G--A-G------GGA-AAA--CCGT
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 23175 46 -     61129 G--------AATTTCTCA-ACCAATATTGCCAATGCAGAC------------AA----------G--A-G------GGA-AAA--CCGT
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420499 46 -   5703754 G--------AATTTCTCA-ACCAATACTGCCAATGCAGAC------------AA----------G--A-G------GGA-AAA--CCGT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          55540 46 -     80660 G--------AATTTCTCA-ACCAATACTGCCAATGCAGAC------------AA----------G--A-G------GGA-AAA--CCGT
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153066 46 -    313613 G--------AATTTCTCA-ACTAATATTGACAACACAGAC------------AA----------G--A-G------GAA-AAC--CTGT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          19518 46 -     19888 C--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26721 46 +     39453 C--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            7240 46 +     27826 C--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             6761 46 -     19483 C--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      6829 46 +      7198 C--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         15087 46 +     15514 C--------AATTTCTCA-GCCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11859 38 -     12148 G--------AATTCCTCA-TATCTGATAG-----ACA----------------A----------A--ATA------GAA-AAT--CTGT
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               3642 33 +   1910179 G--------AATTTCTCA-ACAAATG-------------T------------AA----------A--A-G------AAA-AAC--ATGT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13650877 43 -  18376816 G--------AATTTCTCT-AACAATAA-------------TGTC-agtacagaa----------a--a-g------aaa-atc---tgt
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1953831 45 -   3870691 g--------AATTCCACA-ACAAATATTGCCAACACAGAC------------AA----------G--A-G------GGG-AA---CCAT
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30595 46 +     97271 G--------AATTTATCA-ATCAATATTGCCAGCACAGAC------------AA----------G--G-A------GAA-AGT--TTGT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              18175 44 -    196729 G--------AATTTCTCA-ACTAATAGTGACAATACAGAC------------AA----------G--G-A------GAA-AAT--CT--
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6810351 45 +  69701581 G--------AATTTCTCA-ACCAATATTTCCAACATAGAC------------AA----------C--A-G------gga-aa---ccat
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                10652 44 +     41958 A--------AATTTCACA-ATCCATGTCACCAACACAGAC------------AA----------G--A-A------GAA-AA---CT-T
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72481 36 +    116680 G--------AATTT-TCA-ACCAATA---------CAGGT------------GA----------G--A-G------GTA-AAC--ATGA
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118606 45 -    156842 G--------AACTTCTCC-ACCAATGTTGCCAACACAGAC------------AA----------G--A-G------AAA-AAC--CTG-
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387065 45 +    539355 G--------AACTTCTCC-ACCAGTGTTGCCAACACAGAC------------AA----------G--A-G------AAA-AAC--CTG-
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               26279 46 +     70052 C--------AGTTTTTCA-ACCATCATTGCCGACAAAGAT------------AA----------G--A-A------GAA-AAC--CAGT
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1112 46 -     16117 C--------AGTTTTTCA-ACCATCATTGCCGACAAAGAT------------AA----------G--A-A------GAA-AAC--CAGT
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428418 46 + 186847797 T--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105350 44 +    114563 ---------AATAT-TCA-AACAGCATTGCCAATTCATAA------------AA----------C--A-G------GGA-AAC--CTGT
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   6283 23 +      8208 G--------AATTTCTCA-ACTAATATCACCA---------------------------------------------------------
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81042 43 +    610378 ----------aTTTCTCA-ATCCATATCGCCAATACAGAT------------AA----------G--A-G------GAA-AA---CTGT
i Tonatia_saurophila.TonSau_scaffold_294                 I 268 C 0
s Trachypithecus_auratus.k141_722599                         10812 46 -     20410 C--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    15006 46 +     15221 C--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Trachypithecus_crepusculus.k141_1194022                C 0 C 0
s Trachypithecus_cristatus.k141_580354                       10913 46 +     19930 C--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       7340 46 -     19997 C--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            47464 46 -     60166 C--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        14935 46 -     27529 C--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     14879 46 -     18194 C--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           8607 46 -     21137 C--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    7310 46 -     10723 C--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         6466 46 +      9834 C--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        24779 46 +     32220 C--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5938881 46 +   6242583 C--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        8133 46 +     20839 C--------AATTTCTCA-ACCAATATTGACAATGGAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4293115 34 +  10818551 G--------AA-------------TATTGCCAACACAGAC------------AA----------G--A-G------GAA-AAC--CTGT
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2155540 46 +   4065304 G--------AATTTGTCA-GCAAATGTTGCAAACACAGAC------------AA----------G--A-G------GGG-AAC--CCGT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9191 46 -     10553 G--------AATTTGTCA-GCAAATGTTGCAAACACAGAC------------AA----------G--A-G------GGG-AAC--CCGT
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   53175 46 -     77625 G--------AATTTCTCA-GTCAATATTACCAACACAGGC------------AA----------A--A-G------GAA-AGC--CTAT
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4850295 46 -   5085361 G--------AATTTCTCA-ACCAATATTGCCAACACAGAC------------AA----------G--G-A------GAA-AGC--TTGT
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  11314 46 +     50397 G--------AATTTCTCA-ACCAATATTTCCAACACAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11373 46 +     24756 G--------AATTTCTCA-ACCAATATTTCCAACACAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371729 46 -   5488506 G--------AACTTCTCA-ACCCATATTGATGACACAGAC------------AA----------G--A-G------GGA-AAC--CTGT
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10642 46 -     43706 G--------AATTTCTCA-ACCAATATTGCCCACAAAGAC------------AA----------G--G-A------GAA-AGC--CTGT
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                           977 45 +    224448 G--------AATTTCCCA-ACCAATATTGCCAACACATAG------------AA----------G--A-G------GGG-AA---CCAT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          5219 46 +     86975 G--------AATTTCTCA-ACCAATATTGCCAACACAGAC------------AA----------G--G-A------GAA-AGC--CTGT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      14865 46 +     63895 G--------AATTTCTCA-AACAAGACAGCCAACATAGAA------------AA----------A--A-G------GAA-AAT--CTGT
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             1507 165 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Colobus_guereza.LG01                                   199948958  0 + 200372422 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6650 30 +     62944 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACTGT--T-A--T
s Acinonyx_jubatus.LLWD01001279.1                           827217 28 -   1699592 GTTA-GA-AA-CTGAA--ATGGCACA-A----ACCTT--T-----
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     70822 29 +     87051 ATTA-AA-AC-TGAAA--CTATTCCT-A----CT--A--C-T-GT
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510480 30 -  29979442 TTAA-GG-AA-CTGAA--ATGGCCTG-A----ACCCT--T-A--T
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 1
s Ailurus_fulgens.LNAC01001112.1                             79250 30 -    347723 ATAA-GA-AA-CTGAA--ATGGCCTG-A----ACACT--T-A--T
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 1
s Allactaga_bullata.AllBul_scaffold_9566                     74518 29 -     89534 CTTC-AA-AA-CTAAT--ATGTTTCT-G----CC--T--T-T-AT
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14579 30 -     52922 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCAT--T-A--T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         14515 30 -     28001 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCAT--T-A--T
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          5011 30 -     18505 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCAT--T-A--T
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           5865 30 -     12518 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCAT--T-A--T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              7331 30 +     51355 GTGA-GA-AA-CCAAA--CTGTTCCC-A----GCCCT--T-A--C
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                 453 30 -     36483 GTGA-GA-AA-CCAAA--CTGTTCCC-A----GCCCT--T-A--C
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_743489                               3517 30 -     45847 GTGA-GA-AA-CCAAA--CTGTTCCC-A----GCCCT--T-A--C
i Alouatta_discolor.k141_743489                          I 13 C 0
s Alouatta_juara.k141_1509701                                24722 30 +     25266 GTGA-GA-AA-CCAAA--CTGTTCCC-A----GCCCT--T-A--T
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_918386                             447 30 -      9457 GTGA-GA-AA-CCAAA--CTGTTCCC-A----GCCCT--T-A--T
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_3472759                            18025 30 -     18578 GTGA-GA-AA-CCAAA--CTGTTCCC-A----GCCCT--T-A--T
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              3424 30 +     47717 GTGA-GA-AA-CCAAA--CTGTTCCC-A----GCCCT--T-A--C
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                               121 30 +      5663 GTGA-GA-AA-CCAAA--CTGTTCCC-A----GCCCT--T-A--T
i Alouatta_puruensis.k141_362188                         N 0 C 0
s Alouatta_seniculus.k141_117119                             14741 30 +     50774 GTGA-GA-AA-CCAAA--CTGTTCCC-A----GCCCT--T-A--T
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185239 32 +    412891 GTTA-GA-AA-CTGAA--ATGGCCCA-A----ACTCTTTT-A--T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  15366 30 -     33861 GTTA-GA-AA-CTAAA--CTGTTCCC-A----ACCCT--T-A--T
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            15386 30 -     34016 GTTA-GA-AA-CTAAA--CTGTTCCC-A----ACCCT--T-A--T
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297783 30 -   5030052 GTTA-GA-AA-CTAAA--CTGTTCCC-A----ACCCT--T-A--T
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             15388 30 -     34685 GTTA-GA-AA-CTAAA--CTGTTCCC-A----ACCCT--T-A--T
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28512 30 -     47192 GTTA-GA-AA-CTAAA--CTGTTCCC-A----ACCCT--T-A--T
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      12572 31 +     20879 GCTG-GA-AA-CTAAA--ATGGTTCT-AACACTT--A--T-T---
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       11463 12 +     14667 -----------------------AGT-A----ACCAT--T-A--T
i Arctocebus_calabarensis.k141_2318572                   I 7 I 1
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4648 32 +     43469 GTTA-GA-AA-CTTAA--ATGGACCA-A----ACTCTTTT-A--T
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  53637 30 -     92717 GTTA-GA-AA-CTAAA--ATAGCCCT-A----ACCAT--T-G--T
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54264 30 +     85213 GTTA-GA-AA-CTAAA--ATAGCCCT-A----ACCAT--T-G--T
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             5121 30 -     10423 GTTA-GA-AA-CTAAA--CCGTTCCC-A----ACCCT--T-A--T
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             24593 30 +     31915 GTTA-GA-AA-CTAAA--CCGTTCCC-A----ACCGT--T-A--C
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            5087 30 +      5267 GTTA-GA-AA-CTAAA--CTGTTCCC-A----ACCCT--T-A--T
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590301 30 - 189096842 GTTA-GA-AA-CTAAA--CTGTTCCC-A----ACCCT--T-A--T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             11832 30 -     12001 GTTA-GA-AA-CTAAA--CTGTTCCC-A----ACCCT--T-A--T
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002272 30 -  17673402 GTTA-GA-AA-CTAAA--ATGGCTCA-A----CCTCT--T-A--T
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334730 30 -   7040546 GTTA-GA-AA-CTAAA--ATGGCTCA-A----CCTCT--T-A--T
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  403013 30 -   1652518 GTTA-GA-AA-CTAAA--ATGGCTCA-A----CCTCT--T-A--T
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17799065 30 -  60362399 TTTA-GA-AG-TAGAA--ATGGTCTG-A----ACCCT--T-A--T
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    185122 30 -    185531 TTTA-GA-AG-TAGAA--ATGGTCTG-A----ACCCT--T-A--T
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034508 30 -   9314153 TTTA-GA-AG-TAGAA--ATGGTCTG-A----ACCCT--T-A--T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17958773 30 -  59632846 TTTA-GA-AG-TAGAA--ATGGTCTG-A----ACCCT--T-A--T
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18500285 30 +  63665305 TTTA-GA-AG-TAGAA--ATGGTCTG-A----ACCCT--T-A--T
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1010 30 -     12242 ACCA-GT-AA-TTAAA--ATGATCAT-A----AC--C--T-TTAC
i Capromys_pilorides.CapPil_scaffold_65020               I 10 C 0
s Carlito_syrichta.NW_007247396.1                           201317 31 +    308752 GTTA-AA-AAACTGAA--CTGGTCCT-A----ACCCT--T-A--T
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5006 32 -     11696 GTTA-GA-AG-CTGAA--ATGGCCCA-A----ACTCTTTT-A--T
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137055 30 +    179628 GTTA-GA-AA-CTAAA--ATAGTCCT-A----AT--T--T-TAAT
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     92902 30 +    217609 GCTA-GA-AA-ATGAA--ATGGCCCA-A----CTCCT--T-A--T
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          9746 30 -     11392 GTTA-GA-AG-CTAAA--CGGTTCCC-A----ACCCT--T-A--T
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               5844 30 -      7577 GTTA-GA-AA-CTAAA--CCGTTCCC-A----ACCCT--T-A--T
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25651874 29 +  26074798 GTTA-GA-AA-CTAAA---TGCTCCC-A----ACCCT--T-A--T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_398305                                 1450 29 +      1777 GTTA-GA-AA-CTAAA---TGCTCCC-A----ACCCT--T-A--T
i Cebus_olivaceus.k141_398305                            C 0 C 0
s Cebus_unicolor.k141_544048                                 49787 29 -     74725 GTTA-GA-AA-CTAAA---TGCTCCC-A----ACCCT--T-A--T
i Cebus_unicolor.k141_544048                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         5322 31 +     31688 GTTA-AA-AAACTGAA--CTGGTCCT-A----ACCCT--T-A--T
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12231329 31 +  27778364 GTTA-GA-AA-CTGAA--ATGGCCCAAA----ACCCT--T-A--T
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2356 31 -     25243 GTTA-GA-AA-CTGAA--ATGGCCCAAA----ACCCT--T-A--T
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4475524 30 +   4669795 GTTA-GA-AA-CTAAA--CCCGTCCC-A----ACCAT--T-A--T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        14069 30 -     19203 GTTA-GA-AA-CTAAA--CCCGTCCC-A----ACCAT--T-A--T
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3342297                            685 30 -     14043 GTTA-GA-AA-CTAAA--CCCGTCCC-A----ACCAT--T-A--T
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           8721 30 +     27781 GTTA-GA-AA-CTAAA--CCCGTCCC-A----ACCAT--T-A--T
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         8886 30 -     20310 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCAT--T-A--T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          11865 30 +     29689 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCAT--T-A--T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            6619 30 -     20078 GTTA-GA-AA-CTAAA--CCAGTTCC-A----ATCAT--T-A--T
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          14542 30 -     27936 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCAT--T-A--T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            3406 30 -     17152 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCAT--T-A--T
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38816945 30 +  39242232 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCAT--T-A--T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222637 30 -  21565898 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCAT--T-A--T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       39755 30 -     53127 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCAT--T-A--T
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119848                           6 30 +     27489 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCAT--T-A--T
i Cercopithecus_nictitans.k141_1119848                   N 0 C 0
s Cercopithecus_petaurista.k141_807961                       14556 30 -     27947 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCAT--T-A--T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         14531 30 +     17596 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCAT--T-A--T
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                           578 30 +     14005 GTTA-GA-AA-CTAAA--CCAGTTCC-A----ATCAT--T-A--T
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             428 29 -      8501 GATA-GA--A-CTAAA--GTGACCCA-A----ACCCT--T-A--T
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             21016 30 -     52598 GTTA-GA-AA-CTAAA--ATAGCCCT-A----ACCAT--T-A--T
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16381 30 +     57038 GTTA-GA-AA-CTAAA--ATAGCCCT-A----ACCAT--T-A--T
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1252756 30 +   2543920 GCCA-GT-AA-CTAAA--GTCATCCT-A----AC--C--T-TTAT
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2813271                          10998 30 +     11226 GTTA-GA-AA-CTAAA--CCATTCCC-A----ACCCT--T-A--T
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18428515 30 -  18827391 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCAT--T-A--T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       14952 30 -     50209 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCAT--T-A--T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135421952 30 + 135778131 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCAT--T-A--T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 18206 30 +     19366 GATG-GA-AA-CTGAA--GTAACCCA-A----ACCCT--T-C--T
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            173282 30 +    839153 GATG-GA-AA-CTGAA--GTGACCCA-A----ACCCT--T-C--T
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1910457 30 +   2368649 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ATCGT--T-A--T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_polykomos.k141_906115                              36995 30 +     84244 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCGT--T-A--T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17547995 30 -  53390261 atga-aa-aa-gcaaa--atggcCCA-A----ACCCT--T-A--T
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14326 18 -     20389 ---------------A--ATGGCCCA-A----ACCTT--T-A--T
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 12 I 6
s Cricetomys_gambianus.CriGam_scaffold_18520                 50069 29 +     63868 ATTA-GA-AT-TGAAA--ATACTCAT-G----CT--G--C-T-CT
i Cricetomys_gambianus.CriGam_scaffold_18520             I 7 C 0
s Cricetulus_griseus.LT883664.1                           11667581 27 + 224834208 attA-AA-AT-TGA----ATACTTCT-A----CT--A--C-T-GT
i Cricetulus_griseus.LT883664.1                          C 0 I 3
s Crocidura_indochinensis.CroInd_scaffold_37019               2861 31 -     19598 GGTA-GG-AA-CTTAAATG--CTACA-A----ACTCT--TAT--T
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28386 30 -     87169 GTTA-GA-AA-CTGAA--ATAGCCCA-A----ATCTT--T-A--T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837059 16 +   1526836 GTTA-TA-AA-GTAAA--ATA------------------------
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 1
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35714 30 +     51376 GCCA-GT-AA-TTCAA--ACGATCCG-A----AC--T--T-TTAC
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 10 C 0
s Dasypus_novemcinctus.JH564415.1                            63435 29 +   2246927 GACA-GA--A-CTGAA--GTGACCCA-A----CCCCT--T-A--T
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537245 30 -  12879189 GTTA-GA-AA-CTAAA--ATAGTCCC-A----ACCAT--C-A--T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630019 32 +  20541912 GTTA-GA-AA-CTGAA--ATGGCCCA-A----ACACTTTT-A--T
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673180 31 +   1390856 GTTA-GA-AA-CTGAA--ATGGCCCCAA----ACCCT--T-A--T
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    5932 31 +    198055 GTTA-GA-AA-CTGAA--ATGGCCCAAA----ACCCT--T-A--T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36349 30 +     67921 GCCA-GT-AA-TTAAA--ATGATCCT-A----AC--C--T-TTAT
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Echinops_telfairi.JH980293.1                            48780313 23 + 111700974 ---------A-TTGAA--ACAGTTCC-A----ATATT--T-A--A
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.KE759718.1                                  10424 30 +     11740 GTTA-GA-AA-CTGAA--ATGGCCCA-A----ACCTT--T-A--T
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1097616 29 +  10337057 GTCA-GA-AA-CTGTG--ATGGA-CA-C----ATGTT--T-A--T
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          20312 27 -    110024 atta-aa-tt-tGA----ATACTCAT-A----CT--A--C-T-AT
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                             443 27 +      8657 atta-aa-tt-tGA----ATACTCAT-A----CT--A--C-T-AT
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16329223 15 -  41312741 --------------------GGCCTG-A----AGTCT--T-A--C
i Enhydra_lutris.KZ291758.1                              I 4 I 1
s Eptesicus_fuscus.JH977646.1                              2145611 30 -  14770903 GTTA-GA-AA-CTTAA--ATGGCCCA-A----ACCCT--T-A--T
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1283448 31 +   4378816 ATTA-GA-AG-CTGAC--ATGGCCCAAA----ACCCT--T-A--T
i Equus_asinus.JREZ01000139.1                            C 0 I 14
s Equus_caballus.CM000403.2                               18531269 31 -  39960074 ATTA-GA-AG-CTGAC--ATGGCCCAAA----ACCCT--T-A--T
i Equus_caballus.CM000403.2                              C 0 I 14
s Equus_przewalskii.KK951119.1                               33297 31 +    498745 ATTA-GA-AG-CTGAC--ATGGCCCAAA----ACCCT--T-A--T
i Equus_przewalskii.KK951119.1                           C 0 I 14
s Erinaceus_europaeus.JH835339.1                           3328154 28 -   7059049 --tG-GA-AA-TTTAA--ATGAC-TCAT----ATCCT--T-A--T
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21205122 30 -  21539334 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCAT--T-A--T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13740 30 -     14127 GTTA-GA-AA-CTAAA--ATAGCCCT-G----ACCAT--T-A--T
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6443 30 -     16928 GTTA-GA-AA-CTAAA--ATAGCCCT-G----ACCAT--T-A--T
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15467 30 -     25546 GTTA-GA-AA-CTAAA--ATAGCCCT-G----ACCAT--T-A--T
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12671 30 +     26330 GTTA-GA-AA-CTAAA--ATAGCCCT-G----ACCAT--T-A--T
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 13906 30 +     23973 GTTA-GA-AA-CTAAA--ATAGCCCT-G----ACCAT--T-A--T
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12668 30 +     75513 GTTA-GA-AA-CTAAA--ATAGCCCT-G----ACCAT--T-A--T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10598 30 +     97555 GTTA-GA-AA-CTAAA--ATAGCCCT-G----ACCAT--T-A--T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            13530 30 +     26496 GTTA-GA-AA-CTAAA--ATAGCCCT-G----ACCAT--T-A--T
i Eulemur_rubriventer.k141_571033                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4142 30 -     17153 GTTA-GA-AA-CTAAA--ATAGCCCT-G----ACCAT--T-A--T
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13715 30 +    111500 GTTA-GA-AA-CTAAA--ATAGCCCT-G----ACCAT--T-A--T
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20236868 28 + 206538554 GTTA-GA-AA-CTGAA--ATGGCACA-A----ACCTT--T-----
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195711 28 + 205367284 GTTA-GA-AA-CTGAA--ATGGCACA-A----ACCTT--T-----
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  9459 28 -     36744 GTTA-GA-AA-CTGAA--ATGGCACA-A----ACCTT--T-----
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 3
s Fukomys_damarensis.KN121974.1                             850396 30 +   3816255 GTAC-AT-AA-CTATA--ATGACCCT-A----AC--C--T-CTAT
i Fukomys_damarensis.KN121974.1                          C 0 I 3
s Galago_moholi.ctg2040                                     426597 12 -    453645 -----------------------CAT-A----ACCAT--T-A--T
i Galago_moholi.ctg2040                                  I 7 I 1
s Galago_senegalensis.k141_631886                             4288 12 +     11339 -----------------------TAT-A----ACCAT--T-A--T
i Galago_senegalensis.k141_631886                        I 7 I 1
s Galagoides_demidoff.k141_1711393                            1601 12 +     41679 -----------------------CAT-A----ACCAT--T-A--T
i Galagoides_demidoff.k141_1711393                       I 7 I 1
s Galeopterus_variegatus.GalVar_scaffold_108840               1119 30 -      9135 ACTA-GA-AA-CAAAG--GTGGCCCA-A----ATCTT--T-G--T
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              15905 30 -     32273 GTTA-GA-AA-CTAAC--CCAGTCCC-A----ACTGT--T-A--T
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186338051 30 + 186649187 GTTA-GA-AA-CTAAC--CCAGTCCC-A----ACTGT--T-A--T
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6779 30 -     19426 GTTA-GA-AA-CTAAA--ATAGCCCT-G----ACCAT--T-A--T
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             11928 30 -     15286 GTTA-GA-AA-CTAAA--ATAGCCCT-G----ACCAT--T-A--T
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13567 30 +     18253 GTTA-GA-AA-CTAAA--ATAGCCCT-G----ACCAT--T-A--T
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13668 30 -     41752 GTTA-GA-AA-CTAAA--ATAGCCCT-G----ACCAT--T-A--T
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13505 30 -     16460 GTTA-GA-AA-CTAAA--ATAGCCCT-G----ACCAT--T-A--T
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242219 30 +    327341 GTTA-GA-AA-CTGAA--ATAGCCCA-A----ACCTT--T-A--T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20662179 30 +  22651954 GTCA-GT-AG-CTATA--ATGGCCCT-A----AC--C--T-TTAT
i Heterocephalus_glaber.JH602082.1                       C 0 I 1
s Heterohyrax_brucei.HetBruBak_scaffold_122365                 795 30 +      7595 GCCA-GA-AA-CTGAA--ACGGCCCC-A----GTACT--T-A--T
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hoolock_leuconedys.ctg274                                    434717 30 +    630532 GTTA-GA-AA-CAAAA--CCAGTCCC-A----ACCAT--T-A--T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  44913 30 +     55795 GTTA-GA-AA-TTGAA--ATAGCCCA-A----ACCTT--T-A--T
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83061 30 +    135385 GCCG-GT-AA-TGAAA--ATGACCTT-A----AC--C--T-TTAA
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7520825 32 -   7955117 GCCG-GAAAA-CTAAA--ATGgtcat-aactttt--a--t-t---
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   22458 30 +     31101 GTTA-GA-AA-CTAAA--ATAGCCCT-A----ACCAT--T-G--T
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8276815 29 -   9596543 cttc-aa-aa-ctAAC--ATGTTTCT-G----CC--T--T-T-AT
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    14027 30 -     42476 GTTA-GA-AA-CTTAA--ATGGCCCA-A----ACCCT--T-A--T
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15524020 30 -  30322482 GTTA-GA-AA-CTAAC--ATAGCCCT-G----ACCAT--T-A--T
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7383 30 +     64341 GTTA-GA-AA-CTAAA--CCGTTCCC-A----ACCCT--T-A--T
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           4706 30 +      4941 GTTA-GA-AA-CTAAA--CCGTTCCC-A----ACCCT--T-A--T
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        7424 30 +     35603 GTTA-GA-AA-CTAAA--CCGTTCCC-A----ACCCT--T-A--T
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    28890 18 +     38576 GTTA-GA-AA-CTAAA--CCGTT----------------------
i Leontopithecus_chrysomelas.k141_1519602                I 11 I 7
s Leontopithecus_rosalia.k141_464620                         25587 18 +     66356 GTTA-GA-AA-CTAAA--CCGTT----------------------
i Leontopithecus_rosalia.k141_464620                     I 11 I 7
s Lepilemur_ankaranensis.k141_596936                         10918 30 -     23766 GTTA-GA-AA-CTAAA--ATAGCCCT-A----ACCAT--T-A--T
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             28979 30 +     45836 GTTA-GA-AA-CTAAA--ATAGCCCT-A----ACCAT--T-A--T
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1515 30 +     25010 GTTA-GA-AA-CTAAA--ATAGCCCT-A----ACCAT--T-A--T
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      26915 30 +     54090 GTTA-GA-AA-CTAAA--ATAGCCCT-A----ACCAT--T-A--T
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3042745 30 +   3914936 GTAA-GA-AA-CTGAA--ATGGCCTG-A----ACCCT--T-A--T
i Leptonychotes_weddellii.KB714746.1                     C 0 I 1
s Lepus_americanus.LepAme_scaffold_107385                     6398 22 -     14121 -----------CTAAA--ATGATCCT-A----ATTCA--T-A--T
i Lepus_americanus.LepAme_scaffold_107385                I 2 C 0
s Lophocebus_aterrimus.ctg367                              1437079 22 +   1826925 -----------CTAAA--CCCGTCCC-A----ACCAT--T-A--T
i Lophocebus_aterrimus.ctg367                            I 8 C 0
s Loris_lydekkerianus.k141_2539221                            5845 12 +     11245 -----------------------AGT-A----ACCAT--T-G--T
i Loris_lydekkerianus.k141_2539221                       I 7 I 1
s Loris_tardigradus.ctg83                                  1004665 12 +   6120653 -----------------------AGT-A----ACCAT--T-G--T
i Loris_tardigradus.ctg83                                I 7 I 1
s Loxodonta_africana.GL010049.1                            4217223 30 -  43346337 GTTA-GA-AA-CTGAA--ATAGCCCA-A----ATACT--T-A--T
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17955013 30 -  59628241 ttta-ga-aa-tagaa--atggtCTG-A----ACCCT--T-A--T
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               6881 30 +     40492 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCGT--T-A--T
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59676140 30 +  60120075 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCGT--T-A--T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 12653 30 -     26193 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCGT--T-A--T
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            80437 30 -    114318 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCGT--T-A--T
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  6128 30 -     23192 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCGT--T-A--T
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                15597 30 -     29190 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCGT--T-A--T
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  24162 30 +     37952 GTTA-GA-AA-CTAAA--CCGGTCCC-A----ACCGT--T-A--T
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186839251 30 + 187317192 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCGT--T-A--T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25457814 30 -  25927173 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCGT--T-A--T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  80010 30 +     89720 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCGT--T-A--T
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 7011 30 +     20474 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCGT--T-A--T
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   6811 30 -     14993 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCGT--T-A--T
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  329677 30 -    668171 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCGT--T-A--T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 5127 30 -     24072 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCGT--T-A--T
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               25749 30 -     45290 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCGT--T-A--T
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90528 18 +     94391 ---------------A--ATGGCCCA-A----ACCTT--T-A--T
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 6 C 0
s Mandrillus_leucophaeus.scaffold280                      23937344 30 -  24302211 GTTA-GA-AA-CTAAA--CCCGTCCC-A----ACCAT--T-A--T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               351472 30 +    752769 GTTA-GA-AA-CTAAA--CCCGTCCC-A----ACCAT--T-A--T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              18401 30 +    737560 GTTA-AA-CA-ATGAA--ATGGCCCA-A----ACCCT--T-A--G
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              50390 30 -    317179 GTTA-AA-CA-ATGAA--ATGGCCCA-A----ACCCT--T-A--T
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33103021 32 -  40650429 GCTG-GAAAA-CTAAA--ATGGtcat-aactttt--a--t-t---
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        10244 18 -    207569 ---------------A--ATGGCCCA-A----ACCCT--T-A--T
i Megaderma_lyra.MegLyr_scaffold_4542                    I 12 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              9945 30 +     13704 GTAA-GA-AA-ATGAA--ATGGCCTG-A----AGCCT--T-A--T
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 1
s Meriones_unguiculatus.MerUng_scaffold_7390                 32762 29 +    140813 ATTA-GA-AC-TGAAA--ATATTCCT-G----CT--A--C-T-GT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12182257 26 -  29670104 attA-AA-AT-TGA----ATACC-CT-A----CC--A--C-T-GT
i Mesocricetus_auratus.KB708134.1                        C 0 I 3
s Mico_argentatus.k141_1239457                                5661 30 -      7380 GTTA-GA-AA-CTAAA--TCGTTCCC-A----ACCCT--T-A--T
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               4734 30 +     18990 GTTA-GA-AA-CTAAA--CCGTTCCC-A----ACCCT--T-A--T
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      5673 30 -      7356 GTTA-GA-AA-CTAAA--CCGTTCCC-A----ACCCT--T-A--T
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18291440 30 -  93316391 GTTA-GA-AA-CTAAA--ATAGCACT-A----ACCAT--T-A--T
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    22050 23 -    145209 ---------A-CTGAA--ATAGTTCC-A----ATATT--T-A--A
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                15550 31 -     19307 -TTA-GA-AA-CTGAA--ATGGCCCA-A----ACTCTCTT-A--T
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11260491 27 -  27267610 atta-aC-AT-TGA----ATACTCAT-A----CT--A--C-T-AT
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850527 30 +   8254450 GATA-GA-AA-CTTCA--GTAGCCCA-A----ACCCT--T-A--T
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34204 30 +     64694 GATA-GA-AA-CTTCA--GTGGCCCA-A----ACCCT--T-A--T
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9069 30 -     28506 GTTG-AA-AA-CTAAA--CCAGTCCC-A----ACCAT--T-A--T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         5613 30 -      8324 GTAA-GA-AA-CTGAA--ATGGCCTG-A----ACCCT--T-A--T
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 1
s Mirza_zaza.k141_952172                                      8985 30 -     37649 GTTA-AA-AA-CTAGA--ATAGCCCT-A----ACCAT--T-A--T
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141511 32 -    366855 GTTA-GA-AA-CTGAA--ATGGCCCA-A----ATCCTTTT-A--T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35318 30 +     37127 GTTA-GA-AA-CTGAA--ATAGCCCA-A----ACCTT--T-A--T
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           6706 30 +     14753 GTTA-GA-AA-CTTAA--ATGGCTCA-A----ACCCT--T-A--T
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84361372 29 - 120012414 ATTA-GA-AT-TATAA--ACATTCCT-G----CT--A--C-T-GT
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87650370 29 - 129401213 ATTA-GA-AT-TAAAA--ACACTCCT-G----CT--A--C-T-GT
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31355029 29 -  89631738 ATTA-GG-AT-TAAAA--ACACTCCA-G----CT--A--T-T-GT
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90752431 29 - 130317789 ATTA-GA-AT-TAAAA--ACACTCCT-G----CT--A--C-T-GT
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               301136 30 -  14710649 gtaa-ga-aa-atgaa--atggccTA-A----AGCCT--T-A--T
i Mustela_putorius.JH418006.1                            C 0 I 1
s Myocastor_coypus.MyoCoy_scaffold_10123                     71200 30 -     80779 GCCA-GT-AA-TTAAA--ATGATACT-A----AC--C--T-TTAC
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 I 2
s Myotis_brandtii.KE162005.1                                280351 30 -  10118263 GTTA-GA-AA-CTTCA--ATGGCCCA-A----ACCCT--T-A--T
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1587619 30 -   6019432 GTTA-GA-AA-CTTCA--ATGGCCCA-A----ACCCT--T-A--T
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3903705 30 -   4330536 GTTA-GA-AA-CTTCA--ATGGCCCA-A----ACCCT--T-A--T
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_482318                         379 30 -       721 GTTA-GA-AA-CTTCA--GTGGCCCA-A----ACCCT--T-A--T
i Myotis_myotis.MyoMyo_scaffold_482318                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189156 30 +    196477 GGTA-GA-AA-CTAAG--GTAACCTA-A----ACCCC--T-A--T
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2034083 29 -   3037898 GTTA-GA-AA-CTAAA--ATGGTCTT-A----CC--T--T-T-AT
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               15044 30 +     21681 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCGT--T-A--T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306867 30 +  31847680 GTAA-GA-AA-CTGAA--ATGGCCTG-A----ACCCT--T-A--T
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 1
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149275 30 -   9404916 atta-ga-aa-tagaa--atggtCTG-A----ACCCT--T-A--T
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102579636 12 - 196305487 -----------------------agt-a----accat--t-a--t
i Nycticebus_bengalensis.LG01                            I 7 I 6575
s Nycticebus_coucang.k141_771082                              1481 12 -      2667 -----------------------agt-a----accat--t-a--t
i Nycticebus_coucang.k141_771082                         I 7 N 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105750065 12 + 199412804 -----------------------agt-a----accat--t-a--t
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 7 I 11500
s Ochotona_princeps.JH802162.1                             1363414 30 +   3988456 GTTA-GA-AA-CTAAA--ATtatcat-a----tttct--t-a--t
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  746806 30 +  11899542 GACA-GA-AA-TTAAA--ATGACCCT-A----AC--T--T-TTAC
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                              506552 30 -   2017862 GTAA-GA-AA-CTGAA--ATGGGCGA-A----ACCCT--T-A--T
i Odobenus_rosmarus.KB229312.1                           C 0 I 1
s Ondatra_zibethicus.OndZib_scaffold_46174                   25159 27 +     28053 ATTA-AC-AT-TGA----ATACTCAT-A----AT--A--C-T-AT
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    80160 27 +    102263 ATTA-AA-AC-TGA----ATGCTCTT-G----CT--A--C-T-GT
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9741 30 -     18566 GTTA-GA-AA-CTGAA--ATGGCCCA-A----ATACT--T-A--T
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147278 22 + 174332312 -----------CTAAA--ATGACCCT-A----ATTCA--T-A--T
i Oryctolagus_cuniculus.CM000791.1                       I 2 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462251 22 -    559221 -----------tagaa--atggtCTG-A----ACCCT--T-A--T
i Otocyon_megalotis.JAEUCK010005147.1                    I 8 C 0
s Otolemur_crassicaudatus.k141_222918                         4129 12 +      8798 -----------------------CAT-A----ACCAT--T-A--T
i Otolemur_crassicaudatus.k141_222918                    I 7 I 1
s Otolemur_garnettii.GL873799.1                             696292 12 -   1103335 -----------------------CAT-A----ACCAT--T-A--T
i Otolemur_garnettii.GL873799.1                          I 7 I 1
s Pan_paniscus.KQ411613.1                                    43998 30 +     80009 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACTGT--T-A--T
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03001836.1                             29923 30 +     51860 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACTGT--T-A--T
i Pan_troglodytes.NBAG03001836.1                         I 46 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  151070 28 +    230217 GTTA-GA-AA-CCGAA--ATGGCACA-A----ACCTT--T-----
i Panthera_onca.PanOnc_flattened_line_3271               I 10 C 0
s Panthera_pardus.KV860321.1                                264279 28 +  18783137 GTTA-GA-AA-CCGAA--ATGGCACA-A----ACCTT--T-----
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4721158 28 -   8748460 GTTA-GA-AA-CCGAA--ATGGCACA-A----ACCTT--T-----
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183443094 30 + 183742232 GTTA-GA-AA-CTAAA--CCCGTCCC-A----ACCAT--T-A--T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             6792 30 +     20448 GTTA-GA-AA-CTAAA--TCCGTCCC-A----ACCAT--T-A--T
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563600 30 +  20919399 GTTA-GA-AA-CTAAA--CCCGTCCC-A----ACCAT--T-A--T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   5536 30 +     41871 GTTA-GA-AA-CTAAA--CCCGTCCC-A----ACCAT--T-A--T
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     8821 30 +     27711 GTTA-GA-AA-CTAAA--CCCGTCCC-A----ACCAT--T-A--T
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  8902 30 +      9205 GTTA-GA-AA-CTAAA--CCCGTCCC-A----ACCAT--T-A--T
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12550 30 -     78924 GTTA-GA-TA-CTGAA--ATGGCCCA-A----ACCTT--T-G--T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10099 12 +     13100 -----------------------AGT-A----ACCAT--T-A--T
i Perodicticus_ibeanus.k141_855320                       I 7 I 1
s Perodicticus_potto.k141_1092580                             8505 12 +     25941 -----------------------AGT-A----ACCAT--T-A--T
i Perodicticus_potto.k141_1092580                        I 7 I 1
s Peromyscus_maniculatus.KI615324.1                       18194786 27 -  18517816 atta-AA-AT-TGA----ATACTCCT-A----CT--A--C-T-AT
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28080 30 -     29689 CTCA-GT-AA-CTAAA--ATCACCCC-A----GG--T--T-TTAT
i Petromus_typicus.PetTyp_scaffold_42190                 I 12 C 0
s Piliocolobus_badius.k141_1234363                           43555 30 +     62158 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCGT--T-A--T
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        38286 30 +     89929 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCGT--T-A--T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            39702 30 +     51399 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCGT--T-A--T
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14295940 30 -  14605196 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCGT--T-A--T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1672 13 +     22620 ----------------------CCCA-A----ACCCT--T-A--T
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 165 C 0
s Pongo_abelii.CM009266.2                                189131040 30 + 189387572 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCGT--T-A--T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570648 30 +   9816681 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCGT--T-A--T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               73224 30 -     81375 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCGT--T-A--T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              5044 30 +     19060 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCGT--T-A--T
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 13250 30 -     22811 GCCA-GA-AA-CTGAA--ATGGCCCC-A----GTACT--T-A--T
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2596700 30 -   4620579 GTTA-GA-AA-CTAAA--ATAGCCCT-G----ACCAT--T-A--T
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990681 30 +   2598838 GTTA-GA-AA-CTAAA--ATAGCCCT-A----ACCAT--T-G--T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          28993 30 +     38485 GTTA-GA-AA-CTAAA--ATAGCCCT-A----ACCAT--T-G--T
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1036 30 -     13098 GTTA-GA-AA-CTAAA--ATAGCCCT-A----ACCAT--T-G--T
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26514 30 +     35766 GTTA-GA-AA-CTAAA--ATAGCCCT-A----ACCAT--T-G--T
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4701 30 -     24134 GTTA-GA-AA-CTAAA--ATATCCCT-A----ACCAT--T-G--T
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28526 30 -     67325 GTTA-GA-AA-CTAAA--ATAGCCTT-A----ACCAT--T-G--T
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4749 30 -      6182 GTTA-GA-AA-CTAAA--ATAGCCCT-A----ACCAT--T-G--T
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            10404 29 -     21651 gcta-gA-AC-TGAAA--ATATTCCT-G----CT--A--C-T-GT
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            14964 32 -     21811 gaaa-ga-aa-ctgaa--atggcTCA-A----ACCCTTTT-A--T
i Pteronotus_parnellii.KE909381.1                        I 110 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40135 30 +     42204 GTAA-GA-AA-ATGAA--ATGGCCTG-A----AGCCT--T-A--T
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 1
s Pteropus_alecto.KB030862.1                              22976683 30 +  28871421 GTTA-GA-AA-CTGAA--ATGGCCCA-A----ACCTT--T-A--T
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                6736 30 -      8028 GTTA-GA-AA-CTGAA--ATGGCCCA-A----ACCTT--T-A--T
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20274224 28 -  38429054 GTTA-GA-AA-CTGAA--ATGGCACA-A----ACCTT--T-----
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15053 30 -     91421 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCGT--T-A--T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7609173 30 +   7812017 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACTGT--T-A--T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             15025 30 -     72585 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACTGT--T-A--T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53570632 29 +  90668790 atTA-TA-AT-TAAAA--ACACTTCT-G----CT--A--C-T-GT
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             6739 30 -     11128 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCAT--T-A--T
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236092 30 - 195417433 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCAT--T-A--T
i Rhinopithecus_roxellana.NC_044550.1                    I 13 C 0
s Rhinopithecus_strykeri.ctg102                            7671744 30 +   7961872 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCAT--T-A--T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87704 30 -     96226 GTTA-GA-AA-CTGAA--ATGGCTCA-A----ACCTT--T-A--T
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               8060 30 -      8359 GTTA-GA-AA-CTAAA--CCATTCCC-A----ACCCT--T-A--T
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_imperator.k141_2524406                             2019 30 +      2197 GTTA-GA-AA-CTAAA--CCGTTCCC-A----ACCCT--T-A--A
i Saguinus_imperator.k141_2524406                        C 0 C 0
s Saguinus_inustus.k141_699149                               13438 30 +     13640 GTTA-GA-AA-CTAAA--CCGATCCC-A----ACCCT--T-A--A
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               8307 30 +      8564 GTTA-GA-AA-CTAAA--CCGTTCCC-A----ACCCT--T-A--T
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469156 30 + 209938924 GTTA-GA-AA-CTAAA--CCATTCCC-A----ACCCT--T-A--T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 7863 30 -      9399 GTTA-GA-AA-CTAAA--CCGATCCC-A----ACCCT--T-A--A
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119950774 30 - 121099817 GTTG-GA-AA-CTAAA--CTGTTCCC-A----ACCCT--T-A--T
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23230 30 +     46362 GTTG-GA-AA-CTAAA--CTGTTCCC-A----ACCCT--T-A--T
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               23325 30 +     45824 GTTG-GA-AA-CTAAA--CTGTTCCC-A----ACCCT--T-A--T
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             39953 30 -     64574 GTTG-GA-AA-CTAAA--CTGTTCCC-A----ACCCT--T-A--T
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               2959 30 -     23631 GTTG-GA-AA-CTAAA--CTGTTCCC-A----ACCCT--T-A--T
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 23221 30 -     61129 GTTG-GA-AA-CTAAA--CTGTTCCC-A----ACCCT--T-A--T
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420545 29 -   5703754 GTTA-GA-AA-CTAAA---TGCTCCC-A----ACCCT--T-A--T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          55586 29 -     80660 GTTA-GA-AA-CTAAA---TGCTCCC-A----ACCCT--T-A--T
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153112 30 -    313613 GTTA-GA-AA-ATGAA--ATGGCCCA-A----ACCCT--T-A--T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          19564 30 -     19888 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCGT--T-A--T
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26767 30 +     39453 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCGT--T-A--T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            7286 30 +     27826 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCGT--T-A--T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             6807 30 -     19483 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCGT--T-A--T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      6875 30 +      7198 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCGT--T-A--T
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         15133 30 +     15514 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCGT--T-A--T
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11897 30 -     12148 ATTAGAA-AT-TGA--AAATATTTCT-A----GC--A--C-T-GT
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 I 48
s Solenodon_paradoxus.SolPar_flattened_line_126               3675 26 +   1910179 GTTA-GA-AA-CTGTA----GACCCA-T----GCTCT--T-----
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 1
s Sorex_araneus.JH798187.1                                13650920 28 -  18376816 gtta-aa-aa-ctgaaaat--acaca-A----A--CC--TAT---
i Sorex_araneus.JH798187.1                               C 0 I 1
s Spermophilus_dauricus.KZ294078.1                         1953876 32 -   3870691 GCCA-GAAAA-CTAAA--ATGGtcat-aactttt--a--t-t---
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30641 30 +     97271 GTAA-GA-AA-CTGAA--ATGGCCTG-A----ACCCC--T-A--T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 1
s Suricata_suricatta.SurSur_flattened_line_6629              18219 30 -    196729 GTTA-GA-AA-CTGAA--ATAGCCCA-A----ACCTT--T-A--T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6810396 28 +  69701581 g--a-ga-aa-ataaa--atggccCA-A----CCCCT--T-A--T
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                10696 30 +     41958 GTTA-GA-AA-CTGAA--ATGGTGCA-A----ACCCT--T-A--T
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72517 30 +    116680 GATA-GA-AA-CTAAA--GTAACCTA-A----ACCCC--T-A--T
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118651 28 -    156842 ---A-GA-AA-CTGAA--ATGGCCCAAA----ACCCT--T-A--T
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387110 26 +    539355 ---A-GA-AA-CTGA---ATGGCCC-AA----ACCCT--T-A--T
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               26325 30 +     70052 GTTA-AA-AA-CTAAA--CTGGTCCT-A----ACCCT--T-A--T
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1158 30 -     16117 GTTA-AA-AA-CTAAA--CTGGTCCT-A----ACCCT--T-A--T
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428464 30 + 186847797 GTTA-GA-AA-CTAAA--CCCGTCCC-A----ACCAT--T-A--T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105394 30 +    114563 GTCA-GT-AA-CTAAA--ATCACCCC-A----AC--C--T-TTAT
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   6306 25 +      8208 -----GA--G-CTAAA--GTGACCCA-A----ACCCT--T-A--T
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81085 32 +    610378 GTTA-GA-AA-CTGAA--ATGGCCCC-A----ACTCTTTT-A--T
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         10858 30 -     20410 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCGT--T-A--T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_1194022                    15052 30 +     15221 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCGT--T-A--T
i Trachypithecus_crepusculus.k141_1194022                C 0 I 50
s Trachypithecus_cristatus.k141_580354                       10959 30 +     19930 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCGT--T-A--T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       7386 30 -     19997 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCGT--T-A--T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            47510 30 -     60166 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCGT--T-A--T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        14981 30 -     27529 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCGT--T-A--T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     14925 30 -     18194 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCGT--T-A--T
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           8653 30 -     21137 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCGT--T-A--T
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    7356 30 -     10723 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCGT--T-A--T
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         6512 30 +      9834 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCGT--T-A--T
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        24825 30 +     32220 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCGT--T-A--T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5938927 30 +   6242583 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCGT--T-A--T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        8179 30 +     20839 GTTA-GA-AA-CTAAA--CCAGTCCC-A----ACCGT--T-A--T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4293149 30 +  10818551 GTTA-GA-AA-CTGAA--ATGGCCCA-A----ACATT--T-A--T
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2155586 30 +   4065304 GTTG-AA-AA-CTAAA--ATGGTCCA-A----ACCCT--T-A--T
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9237 30 -     10553 GTTG-AA-AA-CTAAA--ATGGTCCA-T----ACCCT--T-A--T
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   53221 29 -     77625 GTTA-GA-AG-GAGAA--GTGAC-TA-A----ACCCT--T-A--C
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4850341 30 -   5085361 TTAA-GG-AA-CTGAA--ATGGCCTG-A----ACCCT--T-A--T
i Ursus_maritimus.KK499267.1                             C 0 I 1
s Varecia_rubra.k141_590885                                  11360 30 +     50397 GTTA-GA-AA-CTAAA--ATACCCCT-G----ACCAT--T-A--T
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11419 30 +     24756 GTTA-GA-AA-CTAAA--ATAGCCCT-G----ACCAT--T-A--T
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371775 30 -   5488506 GTTA-GA-AA-CTAAA--ATGGCTCA-A----CCTCT--T-A--T
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10688 30 -     43706 ATTA-GA-AA-TAGAA--ATCGTCTG-A----ACCCT--T-A--T
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          1022 27 +    224448 GCTG-GA-AA-CTAAA--ATGGTCAT-A----TT--A--T-T---
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          5265 30 +     86975 GTAA-GA-AA-CTGAA--ATGGGCTA-A----ACCCT--T-A--T
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 1
s Zapus_hudsonius.ZapHud_scaffold_11398                      14911 29 +     63895 TTTA-TA-AA-CTGAC--ATGTTTCT-G----CC--T--T-T-AT
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Colobus_guereza.LG01                                   199948958  0 + 200372422 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6680 50 +     62944 TTTG--ACTAAATAA-GGGTAT----CAACT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CG
s Acinonyx_jubatus.LLWD01001279.1                           827245 46 -   1699592 TCTG--AC----TAA-GGGTAT----GGACT---TTCAAA---------TA--GT-GTTT-ACC---C-TC--AGAA-CC
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     70851 26 +     87051 TCTG--AGTGACAAA-GGATGT----CAACT---TT--------------------------------------------
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 18
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510511 41 -  29979442 -------C----TAA-GTGTAT----TGACT---TTCAAG---------TA--TT-GTAA-ACC---C-TT--AGGA-CC
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 1 C 0
s Ailurus_fulgens.LNAC01001112.1                             79281 41 -    347723 -------C----TAA-GGGTAT----TGACT---TTCAAA---------TA--CT-GTTA-ACC---C-CT--AGAA-CC
i Ailurus_fulgens.LNAC01001112.1                         I 1 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     74547 31 -     89534 TTTG--AGTGACTA--AAGTAT----CTACT---TTGAAA---------CA-----------------------------
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 14
s Allenopithecus_nigroviridis.k141_3361533                   14609 50 -     52922 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-Cc
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         14545 50 -     28001 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          5041 50 -     18505 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           5895 50 -     12518 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              7361 50 +     51355 TGTG--ACTAAATAA-GGGTAT----CAACC---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                 483 50 -     36483 TGTG--ACTAAATAA-GGGTAT----CAACC---TTTAAA---------TA--CT-ATTA-A-C---TCTT--aggg-cc
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_743489                               3547 50 -     45847 TGTG--ACTAAATAA-GGGTAT----CAACC---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                24752 50 +     25266 TGTG--ACTAAATAA-GGGTAT----CAACC---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Alouatta_juara.k141_1509701                            C 0 I 6
s Alouatta_macconnelli.k141_918386                             477 50 -      9457 TGTG--ACTAAATAA-GGGTAT----CAACC---TTTAAA---------TA--CT-ATTA-A-C---TCtt--aggg-cc
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_3472759                            18055 50 -     18578 TGTG--ACTAAATAA-GGGTAT----CAACC---TTTAAA---------TA--CT-ATTA-A-C---TCTT--aggg-cc
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              3454 50 +     47717 TGTG--ACTAAATAA-GGGTAT----CAACC---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGCG-CC
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                               151 50 +      5663 TGTG--ACTAAATAA-GGGTAT----CAACC---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             14771 50 +     50774 TGTG--ACTAAATAA-GGGTAT----CAACC---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185271 46 +    412891 TTTA--GC----TAA-AGGTGT----TAACG---TTCAAA---------TA--TT-GTTA-ACC---T-TT--AGAA-CC
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  15396 50 -     33861 TTTG--ACTAAATGA-GGGTGT----CAACT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--aggg-cc
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            15416 50 -     34016 TTTG--ACTAAATGA-GGGTGT----CAACT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--Aggg-cc
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297813 50 -   5030052 TTTG--ACTAAATGA-GGGTGT----CAACT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             15418 50 -     34685 TTTG--ACTAAATGA-GGGTGT----CAACT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGg-cc
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28542 50 -     47192 TTTG--ACTAAATGA-GGGTGT----CAACT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      12603 48 +     20879 TCTG--AGTGACTAA---GAGT----CAACT---TATAAC---------TAT-C--ATTA-A-C---C-CTA-AGGA-CC
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 2
s Arctocebus_calabarensis.k141_2318572                       11476 38 +     14667 -------------AA-GGGCAT----CAACT---TTTAAA---------TG--TT-ATTA-A-T----GTT--AGGA-CC
i Arctocebus_calabarensis.k141_2318572                   I 1 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4680 46 +     43469 TCTG--GC----TAA-AGGGGT----TAATG---TTCAAA---------TA--TT-ATTA-ACC---T-TT--AGCA-CC
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  53667 50 -     92717 TTTG--ATGAACTAA-GGGTAT----CAACT---TTTAAA---------TA--TT-ATTA-A-T---CCTT--AGGA-CC
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54294 50 +     85213 TTTG--ATGAACTAA-GGGTAT----CAACT---TTTAAA---------TA--TT-ATTA-A-T---CCTT--AGGA-CC
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             5151 50 -     10423 TTTG--ACTAAATGC-GGGTGT----CGACT---TTTAAA---------TA--CT-ATTA-A-C---TCtt--aggg-cc
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             24623 50 +     31915 TTTG--ACTAAATGA-GGGTGT----CGACT---TTTAAA---------TA--CT-ATTA-A-C---GCTT--AGGG-CC
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            5117 50 +      5267 TTTG--ACTAAATGC-GGGTGT----CGACT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGA-CC
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590331 50 - 189096842 TTTG--ACTAAATGC-GGGTGT----CGACT---TTTAAA---------TA--CT-ATTa-a-c---tctt--aggg-cc
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             11862 50 -     12001 TTTG--ACTAAATAC-GGGTGT----CGACT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002302 46 -  17673402 TTTG--AC----TAA-AGGTAT----TAACT---TGCAAA---------TA--TT-ATTA-ACC---C-TT--AGGA-CC
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334760 46 -   7040546 TTTG--AC----TAA-AGGTAT----TAACT---TGCAAA---------TA--TT-ATTA-ACC---C-TT--AGGA-CC
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  403043 46 -   1652518 TTTG--AC----TAA-AGGTAT----TAACT---TGCAAA---------TA--TT-ATTA-ACC---C-TT--AGGA-CC
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17799095 46 -  60362399 TCTA--AC----TAA-GGGTAT----TAACT---TTCAAA---------TA--TT-GTTA-ACC---C-TT--AGAA-TC
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    185152 46 -    185531 TCTA--AC----TAA-GGGTAT----TAACT---TTCAAA---------TA--TT-GTTA-ACC---C-TT--AGAA-TC
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034538 46 -   9314153 TCTA--AC----TAA-GGGTAT----TAACT---TTCAAA---------TA--TT-GTTA-ACC---C-TT--AGAA-TC
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17958803 46 -  59632846 TCTA--AC----TAA-GGGTAT----TAACT---TTCAAA---------TA--TT-GTTA-ACC---C-TT--AGAA-TC
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18500315 46 +  63665305 TCTA--AC----TAA-GGGTAT----TAACT---TTCAAA---------TA--TT-GTTA-ACC---C-TT--AGAA-TC
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1040 41 -     12242 ACCA--AGTGACTAA-AAGCACTTAGTAGTA---TTTTAAAT-GGT---AT-----------------------------
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 18
s Carlito_syrichta.NW_007247396.1                           201348 45 +    308752 TTTG--A----CTAA-GTGTAT----CAACC---ATT-AA---------TA--TT-ATTC-A-C---CCTT--AGGA-TC
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5038 46 -     11696 TTTG--GC----TAA-AGGAGT----TAACA---TTCAAA---------TA--TT-ATTA-ACC---T-TT--AGGA-CA
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137085 51 +    179628 TTTG--AATGACTAG-GAGTAA----CAACT---TCTAAG---------TATTT--ATCA-A-C--CC-TT--GGGA-CC
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 2
s Catagonus_wagneri.CatWag_scaffold_2839                     92932 46 +    217609 TTTG--AC----TAA-AGGAAT----TAACT---TTCCGA---------TA--TC-ATTA-ACC---C-TT--AGGA-CC
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          9776 50 -     11392 TTTG--ACTAAATGC-GGGTGT----CGACT---TTTAAA---------TA--CT-ATTA-A-c---tctt--aggg-cc
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               5874 50 -      7577 TTTG--ACTAAATGC-AGGTGT----CGACT---TTTAAA---------TA--CT-ATTA-A-C---TCtt--aggg-cc
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25651903 50 +  26074798 TTTG--ACTAAATGA-GGGTGT----CAAGT---TTTAAA---------TA--CT-atta-a-c---tctt--aggg-cc
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_398305                                 1479 50 +      1777 TTTG--ACTAAATGA-GGGTGT----CAAGT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Cebus_olivaceus.k141_398305                            C 0 C 0
s Cebus_unicolor.k141_544048                                 49816 50 -     74725 TTTG--ACTAAATGA-GGGTGT----CAAGT---TTTAAA---------TA--CT-ATTA-a-c---tctt--aggg-cc
i Cebus_unicolor.k141_544048                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         5353 45 +     31688 TTTG--A----GTAA-GTGTAT----CAACT---ATT-AA---------Ta--tt-attc-a-c---actt--agga-tc
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12231360 46 +  27778364 TTTA--AC----TAA-AGGtat----taact---ttcaaa---------ta--tt-atta-aca---t-tt--aggA-CG
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2387 46 -     25243 TTTA--AC----TAA-AGGTAT----TAACT---TTCAAA---------TA--TT-ATTA-ACA---T-TT--AGGA-CG
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4475554 50 +   4669795 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        14099 50 -     19203 TTTG--ACTAAATAG-GGGCAT----TAGCT---TTTAAA---------TA--CT-ATTA-A-C---TTTT--AGGG-CC
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3342297                            715 50 -     14043 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           8751 50 +     27781 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         8916 50 -     20310 TTTG--ACTAAATAG-AGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          11895 50 +     29689 TTTG--ACTAAATAG-AGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            6649 50 -     20078 TTTG--ACTAAATAG-GGGCAT----CGGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          14572 50 -     27936 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            3436 50 -     17152 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGgg-cc
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38816975 50 +  39242232 TTTG--ACTAAATAG-AGGCAT----CAGCT---TTTGAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222667 50 -  21565898 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCtt--aggg-cc
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       39785 50 -     53127 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119848                          36 50 +     27489 TTTG--ACTAAATAG-AGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Cercopithecus_nictitans.k141_1119848                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14586 49 -     27947 TTTG--ACTAAATGG--GGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         14561 50 +     17596 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                           608 50 +     14005 TTTG--ACTAAATAG-GGGCAT----CGGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             457 46 -      8501 TTCA--AA----TGA-GGAGGT----TGACT---TTCAAA---------TT--TT-ATTA-ACC---C-TT--AGGA-CC
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             21046 50 -     52598 TTTG--ATGAACTAA-GGGTAT----CAGCT---TTTAAA---------TA--TT-ATTA-A-C---CCTT--AAGA-CC
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16411 50 +     57038 TTTG--ATGAACTAA-GGGTAT----CAGCT---TTTAAA---------TA--TT-ATTA-A-C---CCGT--AGGA-CC
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1252786 41 +   2543920 ACTG--AGTGACTTA-AATCATGTAGtcata---ttttaa----atagtat-----------------------------
i Chinchilla_lanigera.JH722012.1                         C 0 I 21
s Chiropotes_albinasus.k141_2813271                          11028 50 +     11226 TTTG--ACTAAATGA-GGGTGT----CGACT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18428545 50 -  18827391 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       14982 50 -     50209 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135421982 50 + 135778131 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 18236 45 +     19366 A-TG--AA----TAA-GGATAT----CGACT---TTCAAA---------TA--TT-GGTA-ACT---C-TT--AGGA-CC
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            173312 45 +    839153 A-TG--AA----TAA-GGATAT----CGACT---TTCAGA---------TA--TT-GGTA-ACC---C-TT--AGGA-GT
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1910487 50 +   2368649 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_polykomos.k141_906115                              37025 50 +     84244 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17548025 46 -  53390261 TTTG--AC----TAA-AGGTAT----TAACT---TTCAAG---------TA--TT-ACCA-ATC---C-CT--AGGA-AC
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14350 23 -     20389 ------------------------------T---CTCAAA---------TA--TA----A-ACC-----TT--AGGA-CT
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 6 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 50098 51 +     63868 TTTG--AGTGACAAA-AGCTAT----CAACT---T-TAAA---------TAT-T--ATTA-A-AATAT-TT--CAGG-TA
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 135
s Cricetulus_griseus.LT883664.1                           11667611 47 + 224834208 -------TTCAGAAA-GGATAT----CAAct---tttaaa---------ca-tt--atta-a-aatat-tt--aggg-TG
i Cricetulus_griseus.LT883664.1                          I 3 I 4
s Crocidura_indochinensis.CroInd_scaffold_37019               2892 44 -     19598 -TTT--CC----TAA-AAATAT----TAACT---TACAAA---------AG--AA-TTTG-AAC---C-AA--C-AA-TT
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28416 46 -     87169 TCTG--AC----TAA-GGGTAT----TGACT---CTCAAA---------TA--TC-GCTT-ACC---C-TC--AGAA-CC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837076 48 +   1526836 TTTA--AGAGATTGA-AAGTAT----CAAGA---TTTAAA---------AA--T--ATTA-A-C---T-TC--AGGA-CT
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 1 I 5
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35744 44 +     51376 ACTG--AGTGGCTAA-AAGCACATAGTAATA---TTTTAAAT-GTTTAAAT-----------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 18
s Dasypus_novemcinctus.JH564415.1                            63464 46 +   2246927 TTTG--AA----TAA-GGAGAT----TGACT---TTCAAA---------TA--TT-ATTA-ACC---C-TT--AGGA-CC
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537275 25 -  12879189 TTTG--ACTAACTAA-GGGTAT----CAACT---T---------------------------------------------
i Daubentonia_madagascariensis.ctg71                     C 0 I 15
s Desmodus_rotundus.KZ672289.1                             8630051 46 +  20541912 TTTG--GC----TAC-AGGTGT----TAACG---TTCAAA---------TA--TT-ATTA-ACT---T-TT--AGAA-CC
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673211 46 +   1390856 TTTA--AC----TAA-AGGTAT----TAACT---TTCACA---------TA--TT-ATTA-ACA---T-TT--AGGA-CC
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    5963 46 +    198055 TTTA--AC----TAA-AGGTAT----TAACT---TTCAAA---------TA--TT-ATTA-ACA---T-TT--AGGA-CG
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36379 41 +     67921 ACTG--AGAGACTAA-ATGCATGTAGTAATA---TTTTAAATAGT----GT-----------------------------
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 21
s Echinops_telfairi.JH980293.1                            48780336 35 + 111700974 TTTGTTAT----AGA-AATTAG----TGACT---TTCAAA---------TA--GT-ATC---------------------
i Echinops_telfairi.JH980293.1                           C 0 I 4
s Eidolon_helvum.KE759718.1                                  10454 46 +     11740 TCTG--AC----TGA-AGAtat----taact---ttcaaa---------ta--tt-atta-acC---C-TT--AAGA-CT
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1097645 46 +  10337057 TTTG--AC----TAA-TGATAT----TCACT---TTCAAA---------TA--TT-AACA-GTC---C-TT--GAGA-TC
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          20339 53 -    110024 TTTG--AGTCAGAAG-GGGTAT----CAACT---TTTAAG---------TA-CT--ATTA-AAATTAC-TT--AAGT-TG
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 4
s Ellobius_talpinus.LOJH01081419.1                             470 53 +      8657 TTTG--AGTCAGAAC-TGGTAT----CAACT---TTTAAG---------TA-CT--CTTA-AAAATAC-TT--AAGT-TG
i Ellobius_talpinus.LOJH01081419.1                       C 0 I 4
s Enhydra_lutris.KZ291758.1                               16329239 41 -  41312741 -------C----TAA-GGGTAT----TGACT---TTCAAA---------TA--TT-GTTA-ACA---C-TT--AGAA-CT
i Enhydra_lutris.KZ291758.1                              I 1 C 0
s Eptesicus_fuscus.JH977646.1                              2145641 46 -  14770903 TTTG--AC----TAA-AGATAA----TAAGG---TTCAAA---------TA--TT-ATGA-ACC---C-TT--AGGA-CC
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1283493 23 +   4378816 ----------------------------------TTCAAA---------CA--T----TC-ACC---T-TT--AGGA-CC
i Equus_asinus.JREZ01000139.1                            I 14 C 0
s Equus_caballus.CM000403.2                               18531314 23 -  39960074 ----------------------------------TTCAAA---------TA--T----TC-ACC---T-TT--AGGA-CC
i Equus_caballus.CM000403.2                              I 14 C 0
s Equus_przewalskii.KK951119.1                               33342 23 +    498745 ----------------------------------TTCAAA---------TA--T----TC-ACC---T-TT--AGGA-CC
i Equus_przewalskii.KK951119.1                           I 14 C 0
s Erinaceus_europaeus.JH835339.1                           3328182 27 -   7059049 TTTA--AC------A-AGCATT----TAACT---TTCAAC---------TG--C--------------------------
i Erinaceus_europaeus.JH835339.1                         C 0 I 5
s Erythrocebus_patas.Contig38                             21205152 50 -  21539334 TTTG--ACTAAATAG-GGGCAT----CAGTT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13770 50 -     14127 TTTG--ATGAACTAA-GGGTAT----CAGCT---TTTAAA---------TA--TT-ATTA-A-C---CCTT--AGGA-CC
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6473 50 -     16928 TTTG--ATGAACTAA-GGGTAT----CAGCT---TTTAAA---------TA--TT-ATTA-A-C---CCTT--AGGA-CC
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15497 50 -     25546 TTTG--ATGAACTAA-GGGTAT----CAGCT---TTTAAA---------TA--TT-ATTA-A-C---CCTT--AGGA-CC
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12701 50 +     26330 TTTG--ATGAACTAA-GGGTAT----CAGCT---TTTAAA---------TA--TT-ATTA-A-C---CCTT--AGGA-CC
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 13936 50 +     23973 TTTG--ATGAACTAA-GGGTAT----CAGCT---TTTAAA---------TA--TT-ATTA-A-C---CCTT--AGGA-CC
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12698 50 +     75513 TTTG--ATGAACTAA-GGGTAT----CAGCT---TTTAAA---------TA--TT-ATTA-A-C---CCTT--AGGA-CC
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10628 50 +     97555 TTTG--ATGAACTAA-GGGTAT----CAGCT---TTTAAA---------TA--TT-ATTA-A-C---CCTT--AGGA-CC
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_571033                            13560 37 +     26496 TTTG--ATGAACTAA-GGGTAT----CAGCT---TTTAAA---------TA--TT-ATT---------------------
i Eulemur_rubriventer.k141_571033                        C 0 N 0
s Eulemur_rufus.k141_1476633                                  4172 50 -     17153 TTTG--ATGAACTAA-GGGTAT----CAGCT---TTTAAA---------TA--TT-ATTA-A-C---CCTT--AGGA-CC
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13745 50 +    111500 TTTG--ATGAACTAA-GGGTAT----CAGCT---TTTAAA---------TA--TT-ATTA-A-C---CCTT--AGGA-CC
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20236896 46 + 206538554 TCTG--AC----TAA-GGGTAT----GGACT---TTCAAA---------TA--GT-GTTT-ACC---C-TC--AGAA-CC
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195739 46 + 205367284 TCTG--AC----TAA-GGGTAT----GGACT---TTCAAA---------TA--GT-GTTT-ACC---C-TC--AGAA-CC
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  9490 39 -     36744 -------------AA-GGGTAT----GGACT---TTCAAA---------TA--GT-GTTT-ACC---C-TC--AGAA-CC
i Felis_nigripes.FelNig_flattened_line_20823             I 3 C 0
s Fukomys_damarensis.KN121974.1                             850429 24 +   3816255 ------AGTTAGTAA-TATCACTTAGTAATA-------------------------------------------------
i Fukomys_damarensis.KN121974.1                          I 3 I 21
s Galago_moholi.ctg2040                                     426610 38 -    453645 -------------AA-GGGTAT----CAACT---TTTAAA---------TG--TT-ATTA-A-T----CTT--AGGA-CC
i Galago_moholi.ctg2040                                  I 1 C 0
s Galago_senegalensis.k141_631886                             4301 38 +     11339 -------------AA-GGGTAT----CAACT---TTTAAA---------TG--TT-ATTA-A-T----CTT--AGGA-CC
i Galago_senegalensis.k141_631886                        I 1 C 0
s Galagoides_demidoff.k141_1711393                            1614 38 +     41679 -------------AA-GGGTAT----CAACT---TTTAAA---------TG--TT-ATTA-A-C----CTT--AGGA-CC
i Galagoides_demidoff.k141_1711393                       I 1 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1149 49 -      9135 TTTG--ACTGACTAA-GGATAT----CAGCT---TCTGAA---------CA--TT-ATTA-A-C---C-TT--AGGA-CC
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              15935 50 -     32273 TTTG--ACTAAATAA-GGGTAT----CAACT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CG
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186338081 50 + 186649187 TTTG--ACTAAATAA-GGGTAT----CAACT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CG
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6809 50 -     19426 TTTG--ATGAACTAA-GGGTAT----CAGCT---TTTAAA---------TA--TT-ATTA-A-C---CCTT--AGGA-CC
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             11958 50 -     15286 TTTG--ATGAACTAA-GGGTAT----CAGCT---TTTAAA---------TA--TT-ATTA-A-C---CCTT--AGGA-CC
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13597 50 +     18253 TTTG--ATGAACTAA-GGGAAT----CAGCT---TTTAAA---------TA--TT-ATTA-A-C---CCTT--AGGA-CC
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13698 50 -     41752 TTTG--ATGAACTAA-GGGTAT----CAGCT---TTTAAA---------TA--TT-ATTA-A-C---CCTT--AGGA-CC
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13535 50 -     16460 TTTG--ATGAACTAA-GGGTAT----CAGCT---TTTAAA---------TA--TT-ATTA-A-C---CCTT--AGGA-CC
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242249 46 +    327341 TCTG--AC----TAA-GGGTAT----TGACT---CTCAAA---------TA--CT-GTTT-ACC---C-TC--AGAA-CC
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20662210 35 +  22651954 -----------CTAA-GAACATttagtaatattattttaa----atattat-----------------------------
i Heterocephalus_glaber.JH602082.1                       I 1 I 18
s Heterohyrax_brucei.HetBruBak_scaffold_122365                 825 46 +      7595 TTTG--AC----TAA-AGATAT----TAACT---TTCAAA---------CA--TC-AGTA-ATC---C-CT--AAGA-TC
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hoolock_leuconedys.ctg274                                    434747 50 +    630532 TTTG--ACTAAATAA-GGGTAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--ATGG-CC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  44943 46 +     55795 TCTG--AC----TAA-GGGTAT----TGACA---TTCCAA---------TA--TT-GTTT-ACC---C-TC--ACAA-CC
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83091 58 +    135385 ATTG--TGTGACTAA-GAGCACTTAGTAATATTATTTTAAAT-------AT--T--ATTA-CTC---T-TT--AGGG-CA
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 5
s Ictidomys_tridecemlineatus.JH393364.1                    7520857 48 -   7955117 tttg--agtgaCTAA---GCat----caatt---tttaaa---------ga--c-tatta-g-C---C-CTA-AGGA-CC
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 5
s Indri_indri.k141_3655594                                   22488 50 +     31101 TTTG--ATGAACTAA-GGGTAT----CAACT---TTTAAA---------TA--TT-ATTA-A-T---CCTT--AGGA-CC
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8276844 49 -   9596543 TTTG--AGTGACTAA-AAGTAT----CTACt---ttgaaa---------ta-tt--atta-a-aatac-tt--aAG----
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    14057 46 -     42476 TTTG--AC----TAA-AGATAA----CACGG---TTCAAA---------TA--TT-ATGA-ACC---C-TC--AGGA-CC
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15524050 50 -  30322482 TTTG--ATGAACTAA-GGGTAT----CAGCT---TTTAAA---------TA--TT-ATTA-A-C---CCTT--AGGA-CT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7413 50 +     64341 TTTG--ACTAAATGA-GGGTGT----CGACT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           4736 50 +      4941 TTTG--ACTAAATGA-GGGTGT----CGACT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        7454 50 +     35603 TTTG--ACTAAATGA-GGGTGT----CGACT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    28915 50 +     38576 TTTG--ACTAAATGA-GGGTGT----CAGCT---TCTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Leontopithecus_chrysomelas.k141_1519602                I 7 C 0
s Leontopithecus_rosalia.k141_464620                         25612 50 +     66356 TTTG--ACTAAATGA-GGGTGT----CAGCT---TCTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Leontopithecus_rosalia.k141_464620                     I 7 C 0
s Lepilemur_ankaranensis.k141_596936                         10948 46 -     23766 ATTG------ACTAA-GGGTAT----CAGCT---TTTAAA---------TA--TT-ATTA-A-C---CCTT--AGGA-CC
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29009 46 +     45836 ATTG------ACTAA-GGGTAT----CAGCT---TTTAAA---------TA--TT-ACTA-A-C---CCTT--AGGA-CC
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1545 50 +     25010 ATTG--ACTAACTAA-GGGTAT----CAGCT---TTTAAA---------TA--TT-ACTA-A-C---CCTT--AGGA-CC
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      26945 46 +     54090 ATTG------ACTAA-GGGTAT----CAGCT---TTTAAA---------TA--TT-ATTA-A-C---CCTT--AGAA-CC
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3042776 41 +   3914936 -------C----TAA-GGGTAT----TGACT---TTCAAA---------TA--TT-GTTA-ACC---C-TT--AGAA-CC
i Leptonychotes_weddellii.KB714746.1                     I 1 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6420 50 -     14121 TTTC--ACATATTAATA-GTAT----CAGCT---TCTAAA---------TA--TG-ATTA-A-C---C-GCA-AATA-CC
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437101 50 +   1826925 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-T---TCTT--AGGG-CC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5858 38 +     11245 -------------AA-GGGTAT----CAACT---TTTAAA---------TG--TT-ATTA-A-C----CTT--AGCA-CC
i Loris_lydekkerianus.k141_2539221                       I 1 C 0
s Loris_tardigradus.ctg83                                  1004678 38 +   6120653 -------------AA-GGGTAT----CAACT---TTTAAA---------TG--TT-ATTA-A-C----CTT--AGCA-CC
i Loris_tardigradus.ctg83                                I 1 C 0
s Loxodonta_africana.GL010049.1                            4217253 46 -  43346337 TTCG--AC----TAA-AGATAA----TAACT---TTCAAC---------TG--TT-GGTA-ATC---C-CT--AAAC-TC
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17955043 46 -  59628241 TCTA--AC----TAA-GGGTAT----TAACT---TTCAAA---------TA--TT-GTTA-ACC---C-TT--AGAA-TC
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               6911 50 +     40492 TTTG--ACTAAATAG-GGGCAT----CAAGT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGT-CC
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59676170 50 +  60120075 TTTG--ACTAAATAG-GGGCAT----CAAGT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGT-CC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 12683 50 -     26193 TTTG--ACTAAATAG-GGGCAT----CAAGT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGT-CC
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            80467 50 -    114318 TTTG--ACTAAATAG-GGGCAT----CAAGT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGT-CC
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  6158 50 -     23192 TTTG--ACTAAATAG-GGGCAT----CAAGT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGT-CC
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                15627 50 -     29190 TTTG--ACTAAATAG-GGGCAT----CAAGT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGT-CC
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  24192 50 +     37952 TTTG--ACTAAATAG-GGGCAT----CAAGT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGT-CC
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186839281 50 + 187317192 TTTG--ACTAAATAG-GGGCAT----CAAGT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGT-CC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25457844 50 -  25927173 TTTG--ACTAAATAG-GGGCAT----CAAGT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGT-CC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  80040 50 +     89720 TTTG--ACTAAATAG-GGGCAT----CAAGT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGT-CC
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 7041 50 +     20474 TTTG--ACTAAATAG-GGGCAT----CAAGT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGT-CC
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   6841 50 -     14993 TTTG--ACTAAATAG-GGGCAT----CAAGT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGT-CC
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  329707 50 -    668171 TTTG--ACTAAATAG-GGGCAT----CAAGT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGT-Cc
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 5157 50 -     24072 TTTG--ACTAAATAG-GGGCAT----CAAGT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGT-CC
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               25779 50 -     45290 TTTG--ACTAAATAG-GGGCAT----CAAGT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGT-CC
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90546 35 +     94391 TTTG--AC----TAA-AGATAT----TAACT---TTCTAA---------TA--TG-ATTA-A------------------
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 10
s Mandrillus_leucophaeus.scaffold280                      23937374 50 -  24302211 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               351502 50 +    752769 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              18431 46 +    737560 TCTG--AC----AAA-GGGTAT----TAACT---TTCAAA---------TA--TT-GTTA-ACC---C-TT--AGAA-CC
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              50420 46 -    317179 TCTG--AC----AAA-GGGTAT----TAACT---TTCAAA---------TA--TT-GTTA-ACC---C-TT--AGAA-CC
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33103053 48 -  40650429 tttg--agtGACTAA---GCAT----CAACT---TTTAAA---------GA--C-TATTA-T-C---C-CTA-AGGA-CC
i Marmota_marmota.CZRN01000018.1                         C 0 I 5
s Megaderma_lyra.MegLyr_scaffold_4542                        10262 46 -    207569 TTTG--AC----TAG-AAGTGT----TAACT---TTCAAT---------TA--TT-ATTATACC-----TT--AGGA-CT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365              9976 41 +     13704 -------C----TAA-AGATAT----TGACT---TTCAAA---------TA--TT-GTTA-ACA---C-TT--AGAA-CT
i Mellivora_capensis.MelCap_flattened_line_69365         I 1 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 32791 36 +    140813 TTTG--AA--ACAAA-GCATAT----CAACT---TTTAAA---------CA-GT--TTTA--------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 16
s Mesocricetus_auratus.KB708134.1                         12182286 47 -  29670104 -------GTCAGAAA-GGATAT----Caact---tttaat---------aa-tt--atta-a-aatat-tt--aggg-TG
i Mesocricetus_auratus.KB708134.1                        I 3 I 4
s Mico_argentatus.k141_1239457                                5691 50 -      7380 TTTG--ACTAAATGC-GGGTGT----CGACT---TTTAAA---------TA--CT-ATTa-a-c---tctt--aggg-cc
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               4764 50 +     18990 TTTG--ACTAAATGC-GGGTGT----CGACT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      5703 50 -      7356 TTTG--ACTAAATGC-GGGTGT----CGATT---TTTAAA---------TA--CT-Atta-a-c---tctt--aggg-cc
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18291470 50 -  93316391 TTTG--ATGAACTAA-GGGTAT----caact---tttaaa---------ta--tt-gttt-a-c---cCTT--AGGA-CC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    22073 45 -    145209 TTTGTTAT----ACA-AATTAT----TAATT---TTTAAA---------TA--TT-AACA-ATA---A-TT--A----TA
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 4
s Micronycteris_hirsuta.MicHir_scaffold_52381                15581 43 -     19307 TTTG--GC----TAA-AGGTGT----TAACA---TTCAAA---------TA--TC----G-ACC---T-TT--AGGG-CT
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11260518 53 -  27267610 TTTG--AGGCAGAAA-GGGTAT----CAACT---TTTAAG---------ca-tt--atta-aaaatac-tt--aagg-TG
i Microtus_ochrogaster.CM001695.1                        C 0 I 4
s Miniopterus_natalensis.LDJU01000034.1                    1850557 35 +   8254450 TTTG--AC----TAA-AGATAC----TAATG---TTCAAA---------TA--TC-AAAT-A------------------
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 7
s Miniopterus_schreibersii.MinSch_scaffold_18080             34234 46 +     64694 TTTG--AC----TAA-AGATAC----TAATG---TTCAAA---------TA--TC-ATTC-ACC---C-TT--AGGG-CC
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9099 50 -     28506 TTTG--ACTAAATAG-AGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         5644 41 -      8324 -------C----TAA-GGGTAT----TGACT---TTCAAA---------TA--TT-GTTA-ACC---C-TT--AGAA-CC
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 1 C 0
s Mirza_zaza.k141_952172                                      9015 50 -     37649 TTTG--ATGAACTAA-GGGTAT----CAACT---TTTAAA---------TA--TT-GTTA-A-C---CTTT--AGGA-CC
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141543 46 -    366855 TTTG--AC----TAA-AGGTAT----TAATG---TTCAAA---------TA--AT-ATCA-ACC---T-TT--AGGA-CC
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35348 46 +     37127 TCTG--AC----TAA-GGGTAT----TGACT---CTCAAA---------TA--CT-GTTT-ACC---C-TC--AGAA-CC
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           6736 48 +     14753 TTTG--AC----TAA-AGATAA----TAAGG---TTCAAA---------TA--TT-ATGA-ACC---C-TTACAGGA-CC
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84361401 52 - 120012414 TCTG--AGTGGCAAA-GGGTAC----CAAcg---tttaaa---------ca-tt--ttaa-a-aatgc-ta--aggG-TG
i Mus_caroli.LT608237.1                                  C 0 I 4
s Mus_musculus.chr8                                       87650399 52 - 129401213 TTTG--AGTGGCAAA-GGGTAC----CAAcg---tttaaa---------ca-tt--ttaa-a-aatgc-tt--aggg-tg
i Mus_musculus.chr8                                      C 0 I 4
s Mus_pahari.LT608297.1                                   31355058 52 -  89631738 TTTG--AGTGGCAAA-GGGTAC----Caatg---tttaaa---------ca-tt--ttaa-t-aatgc-tT--AGGG-CG
i Mus_pahari.LT608297.1                                  C 0 I 4
s Mus_spretus.CM004101.1                                  90752460 52 - 130317789 TTTG--AGTGGCAAA-GGGTAc----caaca---tttaaa---------ca-tt--ttta-a-aatgc-tt--aggg-tg
i Mus_spretus.CM004101.1                                 C 0 I 4
s Mustela_putorius.JH418006.1                               301167 41 -  14710649 -------C----TAA-GGGTAT----TGACT---TTCAAA---------TA--TT-GTTA-ACA---C-TT--AGAA-CT
i Mustela_putorius.JH418006.1                            I 1 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71232 35 -     80779 --------TGACTAC-AAGCACATAGTAATA---TTTTAAAT-GGT---AT-----------------------------
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 2 I 18
s Myotis_brandtii.KE162005.1                                280381 46 -  10118263 TTTG--AC----TAA-TGATAA----TAAGG---TTCAAA---------TA--TT-ATGA-ACC---C-TT--AGGA-CC
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1587649 46 -   6019432 TTTG--AC----TAA-TGATAA----TAAGG---TTCAAA---------TA--TT-ATGA-ACC---C-TT--AGGA-TC
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3903735 46 -   4330536 TTTG--AC----TAA-TGATAA----TAAGG---TTCAAA---------TA--TT-ATGA-ACC---C-TT--AGGA-CC
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_482318                         409 46 -       721 TTTG--AC----TAA-TGATAA----TAAGG---TTCAAA---------TA--TT-ATGA-ACT---C-TT--AGGA-CC
i Myotis_myotis.MyoMyo_scaffold_482318                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189186 46 +    196477 TTTG--AA----TAA-GGACAT----TAACT---TGCAAA---------TA--TT-AGTA-ATC---C-TT--AGGA-CC
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2034112 48 -   3037898 TATG--AGTGATTAA-GAGTAT----CAACT---TTTAAG---------TGT-T--ATCA-A-AATAT-TC--AG-----
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               15074 50 +     21681 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306898 41 +  31847680 -------C----TAA-GGGTAT----TGACT---TTCAAA---------TA--TT-GTTA-ACC---C-TT--AGAA-CC
i Neomonachus_schauinslandi.NINY01007730.1               I 1 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149305 46 -   9404916 TCTA--AC----TAA-GGGTAT----TAACT---TTCAAA---------TA--TT-GTTA-ACC---C-TT--AGAA-CC
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102586223 38 - 196305487 -------------aa-gGGTAT----CAACT---TTTAAA---------TG--TT-ATTA-A-C----CTT--AGAG-CC
i Nycticebus_bengalensis.LG01                            I 6575 C 0
s Nycticebus_coucang.k141_1127096                              147 38 +      2075 -------------aa-GGGTAT----CAACT---TTTAAA---------TG--TT-ATTA-A-C----CTT--AGAG-CC
i Nycticebus_coucang.k141_1127096                        N 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761577 38 + 199412804 -------------aa-gggtat----caact---tttaaa---------tg--tt-attA-T-C----CTT--AGAG-CC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 11500 C 0
s Ochotona_princeps.JH802162.1                             1363444 50 +   3988456 tttg--acttACTAATA-GTAT----CAGCT---TCTGAA---------GC--TG-ATTA-G-C---T-TT-TAGGA-TC
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  746836 41 +  11899542 ATCG--AGTGACTAA-GAGCACATAGCTATA---TTTTAAAT-GGT---AT-----------------------------
i Octodon_degus.JH651603.1                               C 0 I 18
s Odobenus_rosmarus.KB229312.1                              506583 41 -   2017862 -------C----TAA-GGGTAT----TGACT---TTCAAA---------TA--CT-GTTA-ACC---C-TT--AGAA-CC
i Odobenus_rosmarus.KB229312.1                           I 1 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   25186 53 +     28053 TTTG--AGTCAGAAA-GGGTAT----CAACT---TTTAAG---------CAT-T--ATTA-AGACTAC-TT--AAGG-TG
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 4
s Onychomys_torridus.OnyTor_scaffold_2986                    80187 52 +    102263 TTTG--AGTCAGAAA-GGGTAT----CAATT---GTTAAA---------CAT-T--ATTA-A-AATAT-TT--AGGG-TG
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 4
s Orycteropus_afer.OryAfe_flattened_line_144387               9771 46 -     18566 TTTG--AT----TAA-AGATAT----TAACT---TTCAAA---------TA--TT-AGCA-ATC---T-TT--AAGA-TA
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147300 51 + 174332312 TTTC--ACATATTAATAAGTAT----CAGCT---TCTAAA---------TA--TG-ATTA-A-C---C-CCA-AATA-CC
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462273 46 -    559221 TCTA--AC----TAA-GGGTAT----TAACT---TTCAAA---------TA--TT-GTTA-ACC---C-TT--AGAA-CC
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4142 38 +      8798 -------------AA-GGGTAT----CAACT---TTTAAA---------TG--TT-ATTA-A-C----TTT--AGGA-CC
i Otolemur_crassicaudatus.k141_222918                    I 1 C 0
s Otolemur_garnettii.GL873799.1                             696305 38 -   1103335 -------------AA-GGGTAT----caact---tttaaa---------tg--tt-atta-a-c----tTT--AGGA-CC
i Otolemur_garnettii.GL873799.1                          I 1 C 0
s Pan_paniscus.KQ411613.1                                    44028 50 +     80009 TTTG--ACTAAATAA-GGGTAT----CAACT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CG
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03001836.1                             29953 50 +     51860 TTTG--ACTAAATAA-GGCTAT----CAACT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CG
i Pan_troglodytes.NBAG03001836.1                         C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  151098 46 +    230217 TCTG--AC----TAA-GGGTAT----GGACT---TTCAAA---------TA--CT-GTTT-ACC---C-TC--AGAA-CC
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                264307 46 +  18783137 TCTG--AC----TAA-GGGTAT----GGACT---TTCAAA---------TA--CT-GTTT-ACC---C-TC--AGAA-CC
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4721186 46 -   8748460 TCTG--AC----TAA-GGGTAT----GGACT---TTCAAA---------TA--CT-GTTT-TCC---C-TC--AGAA-CC
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183443124 50 + 183742232 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             6822 50 +     20448 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563630 50 +  20919399 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   5566 50 +     41871 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     8851 50 +     27711 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  8932 50 +      9205 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12580 46 -     78924 TCTG--AC----TAA-GGGTAT----TGACT---TTCAAA---------TA--TT-GTTT-ACC---C-TC--GGGA-CC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10112 38 +     13100 -------------AA-GGGTAT----CAACT---TTTAAA---------TG--CT-ATTA-A-T----GTT--AGGA-CC
i Perodicticus_ibeanus.k141_855320                       I 1 C 0
s Perodicticus_potto.k141_1092580                             8518 38 +     25941 -------------AA-GGGTAT----CAACT---TTTAAA---------TG--CT-ATTA-A-T----GTT--AGGA-CC
i Perodicticus_potto.k141_1092580                        I 1 C 0
s Peromyscus_maniculatus.KI615324.1                       18194813 52 -  18517816 TTTG--AGTCAGAAA-GGCTAT----CAATT---GTtaaa---------ca-tc--atta-a-aatat-tt--aggg-TG
i Peromyscus_maniculatus.KI615324.1                      C 0 I 4
s Petromus_typicus.PetTyp_scaffold_42190                     28110 44 -     29689 ACTG--AGTGGCTAA-GAGCACTTAGTAATATTACTCTGAAT-AT---CCC-----------------------------
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 I 18
s Piliocolobus_badius.k141_1234363                           43585 50 +     62158 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        38316 50 +     89929 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            39732 50 +     51399 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AAGG-CC
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14295970 50 -  14605196 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1685 46 +     22620 TTTG--AC----TAA-AGATAG----TAAGG---TTCAAA---------TG--TT-ATGA-ACC---C-TT--AGGA-CC
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189131070 50 + 189387572 TTTG--ACTAAATAA-GGGTAT----CAACT---TTTAAA---------TA--CG-ATTA-A-C---TCTT--AGGG-TG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570678 50 +   9816681 TTTG--ACTAAATAA-GGGTAT----CAACT---TTTAAA---------TA--CG-ATTA-A-C---TCTT--AGGG-TG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               73254 50 -     81375 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTCAA---------TC--CT-ATTA-A-C---TCTT--AGGG-CC
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              5074 50 +     19060 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTCAA---------TC--CT-GTTA-A-C---TCTT--AGGG-CC
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 13280 46 -     22811 TTTG--AC----TAA-AGATAT----TAACT---TTCAAA---------CA--TC-AGTA-ATC---C-CT--AAGA-TC
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2596730 50 -   4620579 TTTG--ATGAACTAA-GGGTAT----cagct---tttaaa---------ta--tt-atta-a-c---cCTT--AGGA-CC
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990711 50 +   2598838 TTTG--ATGAACTAA-GGGTat----caact---tttaaa---------ta--tt-atta-a-t---ccTT--ATGA-CC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29023 50 +     38485 TTTG--ATGAACTAA-GGGTAT----CAACT---TTTAAA---------TA--TT-ATTA-A-T---CCTT--ATGA-CC
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1066 50 -     13098 TTTG--ATGAACTAA-GGGTAT----CAACT---TTTAAA---------TA--TT-ATTA-A-T---CCTT--ATGA-CC
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26544 50 +     35766 TTTG--ATGAACTAA-GGGTAT----CAACT---TTTAAA---------TA--TT-ATTA-A-T---CCTT--ATGA-CC
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4731 50 -     24134 TTTG--ATGAACTAA-GGGTAT----CAACT---TTTAAA---------TA--TT-ATTA-A-T---CCTT--ATGA-CC
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28556 50 -     67325 TTTG--ATGAACTAA-GGGTAT----CAACT---TTTAAA---------TA--TT-ATTA-A-T---CCTT--ATGA-CC
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4779 50 -      6182 TTTG--ATGAACTAA-GGGTAT----CAACT---TTTAAA---------TA--TT-ATTA-A-T---CCTT--ATGA-CC
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            10433 50 -     21651 TTTG--AG--ACAAA-GCATAT----CAact---tttaaa---------ca-gt--ttta-a-aatgt-tt--aagg-tg
i Psammomys_obesus.NESX01036370.1                        C 0 I 4
s Pteronotus_parnellii.KE909381.1                            14996 46 -     21811 TTTG--AC----TAA-AGGTAT----TAACA---Tccaaa---------ta--tt-atta-aca---t-tt--aggA-CC
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40166 41 +     42204 -------C----TAA-GGGTAT----TGACT---TTCAAA---------TA--TT-GTTA-ACA---C-TT--AGAA-CT
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 1 C 0
s Pteropus_alecto.KB030862.1                              22976713 46 +  28871421 TTTG--AC----TAA-AGATat----taact---ttcaaa---------ta--tt-atta-acC---C-TT--AAGA-CT
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                6766 46 -      8028 TTTG--AC----TAA-AGAtat----taact---ttcaaa---------ta--tt-atta-acC---C-TT--AAGA-CT
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20274252 46 -  38429054 TCTG--AC----TAA-GGGTAT----GGACT---TTCAAA---------TA--GT-GTTT-ACC---C-TC--AGAA-CC
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15083 50 -     91421 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7609203 50 +   7812017 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             15055 50 -     72585 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53570661 52 +  90668790 TTTG--GGTGACAAA-GGGTAc----caact---tttaaa---------ca-tt--ttaa-a-attcc-tt--aGGG-TG
i Rattus_norvegicus.chr16                                C 0 I 4
s Rhinopithecus_bieti.k119_217274                             6769 50 -     11128 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236122 50 - 195417433 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7671774 50 +   7961872 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87734 46 -     96226 TTTG--AC----TAA-AGATAT----TAACT---TTCAAA---------TA--TT-ATTA-ACC---C-TT--AAGA-CT
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               8090 50 -      8359 TTTG--ACTAAATGA-GGGTGT----CGACT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--aggg-cc
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_imperator.k141_2524406                             2049 49 +      2197 TTTG--ACTAAATGA-GGGTGT----CGACT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG--C
i Saguinus_imperator.k141_2524406                        C 0 C 0
s Saguinus_inustus.k141_699149                               13468 49 +     13640 TTTG--ACTAAATGA-GGGTGT----CGACT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG--C
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               8337 49 +      8564 TTTG--ACTAAATGA-GGGTGT----CGACT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG--C
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469186 50 + 209938924 TTTA--ACTAAATGA-GGGTGT----CGACT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGAG-CC
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 7893 49 -      9399 TTTG--ACTAAATGA-GGGTGT----CGACT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--aggg--c
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119950804 50 - 121099817 TTCG--ACTAAATGA-AGGTGT----CAACT---TTTAAA---------TA--CT-ATTA-A-C---TCTC--AGGG-CC
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23260 50 +     46362 TTCG--ACTAAATGA-AGGTGT----CAACT---TTTAAA---------TA--CT-ATTA-A-C---TCTC--AGGG-CC
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               23355 50 +     45824 TTCG--ACTAAATGA-AGGTGT----CAACT---TTTAAA---------TA--CT-ATTA-A-C---TCTC--AGGG-CC
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             39983 50 -     64574 TTCG--ACTAAATGA-AGGTGT----CAACT---TTTAAA---------TA--CT-ATTA-A-C---TCTC--AGGG-cc
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               2989 50 -     23631 TTCG--ACTAAATGA-AGGTGT----CAACT---TTTAAA---------TA--CT-ATTA-A-C---TCTC--aggg-cc
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 23251 50 -     61129 TTCG--ACTAAATGA-AGGTGT----CAACT---TTTAAA---------TA--CT-ATTA-A-C---TCTC--AGGG-CC
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420574 50 -   5703754 TTTG--ACTAAATGA-GGGTGT----CAGGT---TTTAAA---------TA--CT-ATTA-A-c---tctt--aggg-cc
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          55615 50 -     80660 TTTG--ACTAAATGA-GGGTGT----CAGGT---TTTAAA---------TA--CT-ATTA-A-C---tctt--aggg-cc
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153142 46 -    313613 TTTG--GC----TAA-AGGTAT----TAACT---TTCAAA---------TA--TT-ACTA-ATC---C-CT--TGGA-CC
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          19594 50 -     19888 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26797 50 +     39453 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            7316 50 +     27826 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             6837 50 -     19483 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      6905 50 +      7198 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         15163 50 +     15514 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTG-A-C---TCTT--AGGG-CC
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                      366 45 -     30804 ---g--aaa-aaaaa-agttat----caact---tttaaa---------ca-tt--GTTA-A-AATAT-T-----GG-TG
i Sigmodon_hispidus.SigHis_scaffold_42075                n 48 I 4
s Solenodon_paradoxus.SolPar_flattened_line_126               3702 46 +   1910179 TTTC--AT----TAC-AAATAT----TAACT---TTCAAA---------TA--TT-ATTA-ACC---C-TT--AGAA-CC
i Solenodon_paradoxus.SolPar_flattened_line_126          I 1 C 0
s Sorex_araneus.JH798187.1                                13650949 45 -  18376816 -TTT--CC----TAA-agttat----taatt---ttcaaa---------ta--ta-atta-acC---C-TT--A-AGTCT
i Sorex_araneus.JH798187.1                               I 1 C 0
s Spermophilus_dauricus.KZ294078.1                         1953908 48 -   3870691 tttg--agtgaCTAA---GCAt----caatt---tttaaa---------ga--c-tatta-g-C---C-CTA-AGGA-CC
i Spermophilus_dauricus.KZ294078.1                       C 0 I 5
s Spilogale_gracilis.SpiGra_flattened_line_13525             30672 18 +     97271 -------C----TAA-GGGTAT----TGACT---TTC-------------------------------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 1 I 18
s Suricata_suricatta.SurSur_flattened_line_6629              18249 46 -    196729 TCTG--AC----TAA-GAGTAT----TGACT---CTCAGA---------TA--CT-GTTT-ACC---C-TC--AGAA-CC
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6810424 46 +  69701581 TTTG--AC----TAA-AGGTAT----TAACT---TTTCAA---------TA--TT-ATTA-ACC---C-TT--AGGA-CC
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                10726 46 +     41958 TTTG--AC----TAA-AGGTAT----TAACA---TTCAAA---------TA--TT-ATTC-CCC---C-TT--AGGA-CC
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72547 46 +    116680 TTTG--AA----TAA-GGATAT----TAACT---TCCAAA---------TA--TT-AGTA-ACC---C-TT--AGGA-CC
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118679 46 -    156842 TTTG--AC----TAA-AAGTAT----TAACT---TTCAAA---------TA--TT-ATTT-ACC---T-TT--AGGA-CC
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387136 46 +    539355 TTTG--AC----TAA-AAGTAT----TAACT---TTCAAA---------TA--TT-ATTT-ACC---T-TT--AGGA-CC
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               26355 45 +     70052 TTTG--A----CTAA-GTGTAT----CAACT---ATT-AA---------TA--Tt-attc-t-c---cctt--agaa-tc
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1188 45 -     16117 TTTG--A----CTAA-GTGTAT----CAACT---ATT-AA---------TA--TT-ATTC-T-C---CCTT--AGaa-tc
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428494 50 + 186847797 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105424 44 +    114563 ATTG--AGTGACTAA-GAGCACTTAGTAATACTACTTTAAAT-ATT---AT-----------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 18
s Tolypeutes_matacus.TolMat_scaffold_228639                   6331 45 +      8208 TTCA--AA----TAA-GGAGA-----TGACT---TTCAAC---------TA--TT-ATTA-ACC---C-TT--AGGA-CC
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81117 46 +    610378 TTTG--GC----TAA-AAGTGT----TAATG---TCCAAA---------TA--TT-ATTA-ACT---T-TC--AGCA-CC
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         10888 50 -     20410 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                         2 50 -     12674 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Trachypithecus_crepusculus.k141_582567                 n 50 I 6
s Trachypithecus_cristatus.k141_580354                       10989 50 +     19930 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       7416 50 -     19997 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            47540 50 -     60166 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        15011 50 -     27529 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     14955 50 -     18194 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           8683 50 -     21137 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    7386 50 -     10723 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         6542 50 +      9834 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        24855 50 +     32220 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5938957 50 +   6242583 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        8209 50 +     20839 TTTG--ACTAAATAG-GGGCAT----CAGCT---TTTAAA---------TA--CT-ATTA-A-C---TCTT--AGGG-CC
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4293179 46 +  10818551 TTTG--AT----TAA-AGATAT----TAACT---CTCAAT---------TA--TT-GGTA-ATC---C-CT--AAGA-TC
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2155616 29 +   4065304 TTTG--ACTGGCGAA-GGGCAT----CGTTT---TTTCA-----------------------------------------
i Tupaia_chinensis.KB320699.1                            C 0 I 5
s Tupaia_tana.TupTan_flattened_line_97126                     9267 29 -     10553 TTTG--ACTGGCGAA-GGGCAT----CGGTT---TTTCA-----------------------------------------
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 5
s Uropsilus_gracilis.UroGra_scaffold_12083                   53250 44 -     77625 TTTG--AC----TAA-AGACAT----CAACT---TTCAAA---------TA--TT-ACTA-AGT---C-CC--AGAA---
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4850372 41 -   5085361 -------C----TAA-GTGTAT----TGACT---TTCAAG---------TA--TT-GTAA-ACC---C-TT--AGGA-CC
i Ursus_maritimus.KK499267.1                             I 1 C 0
s Varecia_rubra.k141_590885                                  11390 50 +     50397 TTTG--ATGAACTAA-GGGTAT----CAGCT---TTTAAA---------TA--TT-ATTA-A-C---CCTT--AGGA-CC
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11449 50 +     24756 TTTG--ATGAACTAA-GGGTAT----CAGCT---TTTAAA---------TA--TT-ATTA-A-C---CCTT--AGGA-CC
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371805 46 -   5488506 TTTG--AC----TAA-AGGTAT----TAACT---TGCAAA---------TA--TT-ATTA-ACC---C-TT--AGGA-CC
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10718 46 -     43706 TCTA--AC----TAA-GGGTAT----TAACT---TTCAAA---------TA--TT-GTTA-ACC---C-TT--AGAA-CC
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          1049 47 +    224448 TTTG--AGTGACTCA---GCAT----CAACT---TTTAGA---------GA--C--ATTA-A-C---C-CTA-AGGA-CC
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 5
s Zalophus_californianus.ZalCal_flattened_line_17732          5296 41 +     86975 -------C----TAA-GGGTAT----TGACT---TTCAAA---------TA--TT-GTTA-ACC---C-TT--AGAA-CC
i Zalophus_californianus.ZalCal_flattened_line_17732     I 1 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      14940 49 +     63895 TTTG--AGTGACTGA-AAGTAT----TAACT---CTGAAA---------TAT-T--ATTA-A-AATAT-TT--AAG----
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Colobus_guereza.LG01                                   199948958  0 + 200372422 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6730  6 +     62944 TG-------TAAA
s Acinonyx_jubatus.LLWD01001279.1                           827291  6 -   1699592 TC-------AGAA
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510552  6 -  29979442 TC-------AAAA
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             79322  6 -    347723 TC-------AAAA
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     74592  1 -     89534 ------------A
i Allactaga_bullata.AllBul_scaffold_9566                 I 14 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14659  5 -     52922 ta-------taa-
i Allenopithecus_nigroviridis.k141_3361533               C 0 I 1
s Allochrocebus_lhoesti.k141_4309873                         14595  5 -     28001 TA-------Taa-
i Allochrocebus_lhoesti.k141_4309873                     C 0 I 1
s Allochrocebus_preussi.k141_1442296                          5091  5 -     18505 Ta-------taa-
i Allochrocebus_preussi.k141_1442296                     C 0 I 1
s Allochrocebus_solatus.k141_166128                           5945  5 -     12518 Ta-------taa-
i Allochrocebus_solatus.k141_166128                      C 0 I 1
s Alouatta_belzebul.k141_3560514                              7411  5 +     51355 TG-------TAA-
i Alouatta_belzebul.k141_3560514                         C 0 I 1
s Alouatta_caraya.k141_1701091                                 533  5 -     36483 tg-------taa-
i Alouatta_caraya.k141_1701091                           C 0 I 1
s Alouatta_discolor.k141_743489                               3597  6 -     45847 TG-------TAAA
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_2469512                                 1009  6 +      1018 TG-------TAAA
i Alouatta_juara.k141_2469512                            I 126 n 6
s Alouatta_macconnelli.k141_918386                             527  5 -      9457 tg-------taa-
i Alouatta_macconnelli.k141_918386                       C 0 I 1
s Alouatta_nigerrima.k141_3472759                            18105  5 -     18578 tg-------taa-
i Alouatta_nigerrima.k141_3472759                        C 0 I 1
s Alouatta_palliata.k141_2135620                              3504  5 +     47717 TG-------TAA-
i Alouatta_palliata.k141_2135620                         C 0 I 1
s Alouatta_puruensis.k141_362188                               201  5 +      5663 TG-------TAA-
i Alouatta_puruensis.k141_362188                         C 0 I 1
s Alouatta_seniculus.k141_117119                             14821  6 +     50774 TG-------TAAA
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185317  6 +    412891 TT-------GAAA
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  15446  6 -     33861 tg-------taca
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            15466  6 -     34016 tg-------taca
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297863  6 -   5030052 TG-------TACA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             15468  6 -     34685 tg-------taca
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28592  6 -     47192 tg-------taca
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      12653  4 +     20879 ---------AAAA
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 2 C 0
s Arctocebus_calabarensis.k141_2318572                       11514  6 +     14667 CC-------CAAC
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4726  6 +     43469 TT-------GAAA
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  53717  6 -     92717 CC-------AAAA
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54344  6 +     85213 CC-------AAAA
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             5201  6 -     10423 tg-------taaa
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             24673  5 +     31915 TG-------TAA-
i Callimico_goeldii.k141_1091182                         C 0 I 1
s Callithrix_geoffroyi.k119_512088                            5167  6 +      5267 TG-------TAAA
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590381  6 - 189096842 tg-------taaa
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             11912  6 -     12001 TG-------TAAA
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002348  6 -  17673402 TT-------GAAA
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334806  6 -   7040546 TT-------GAAA
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  403089  6 -   1652518 TT-------GAAA
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17799141  6 -  60362399 TC-------AAAA
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    185198  6 -    185531 TC-------AAAA
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034584  6 -   9314153 TC-------AAAA
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17958849  6 -  59632846 TC-------AAAA
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18500361  6 +  63665305 TC-------AAAA
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1099  6 -     12242 TT-------GAAT
i Capromys_pilorides.CapPil_scaffold_65020               I 18 C 0
s Carlito_syrichta.NW_007247396.1                           201393  6 +    308752 TG-------AAAA
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5084  6 -     11696 TC-------GAAA
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     92978  6 +    217609 TT-------GACA
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          9826  6 -     11392 tg-------taaa
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               5924  6 -      7577 tg-------taaa
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25651953  4 +  26074798 tg-------ta--
i Cebus_albifrons.Contig27                               C 0 I 2
s Cebus_olivaceus.k141_398305                                 1529  5 +      1777 TG-------TAA-
i Cebus_olivaceus.k141_398305                            C 0 I 1
s Cebus_unicolor.k141_544048                                 49866  5 -     74725 tg-------taa-
i Cebus_unicolor.k141_544048                             C 0 I 1
s Cephalopachus_bancanus.k141_1423433                         5398  6 +     31688 tg-------aaaa
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12231406  6 +  27778364 TT-------GAAA
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2433  6 -     25243 TT-------GAAA
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4475604  5 +   4669795 TA-------TAA-
i Cercocebus_atys.KQ010504.1                             C 0 I 1
s Cercocebus_chrysogaster.k141_393940                        14149  5 -     19203 TA-------TAA-
i Cercocebus_chrysogaster.k141_393940                    C 0 I 1
s Cercocebus_lunulatus.k141_3342297                            765  5 -     14043 TA-------Taa-
i Cercocebus_lunulatus.k141_3342297                      C 0 I 1
s Cercocebus_torquatus.k141_3057011                           8801  5 +     27781 TA-------TAA-
i Cercocebus_torquatus.k141_3057011                      C 0 I 1
s Cercopithecus_ascanius.k141_1024104                         8966  5 -     20310 Ta-------taa-
i Cercopithecus_ascanius.k141_1024104                    C 0 I 1
s Cercopithecus_cephus.k141_1078548                          11945  5 +     29689 TA-------TAA-
i Cercopithecus_cephus.k141_1078548                      C 0 I 1
s Cercopithecus_diana.k141_1150327                            6699  5 -     20078 TA-------taa-
i Cercopithecus_diana.k141_1150327                       C 0 I 1
s Cercopithecus_hamlyni.k141_187466                          14622  5 -     27936 ta-------taa-
i Cercopithecus_hamlyni.k141_187466                      C 0 I 1
s Cercopithecus_lowei.k141_1854285                            3486  5 -     17152 ta-------taa-
i Cercopithecus_lowei.k141_1854285                       C 0 I 1
s Cercopithecus_albogularis.ctg5                                38817025  5 +  39242232 TA-------TAA-
i Cercopithecus_albogularis.ctg5                               C 0 I 1
s Cercopithecus_mona.ctg39                                21222717  5 -  21565898 ta-------taa-
i Cercopithecus_mona.ctg39                               C 0 I 1
s Cercopithecus_neglectus.k141_2526306                       39835  5 -     53127 Ta-------taa-
i Cercopithecus_neglectus.k141_2526306                   C 0 I 1
s Cercopithecus_nictitans.k141_1119848                          86  6 +     27489 TA-------TAAA
i Cercopithecus_nictitans.k141_1119848                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14635  5 -     27947 ta-------taa-
i Cercopithecus_petaurista.k141_807961                   C 0 I 1
s Cercopithecus_pogonias.k141_822820                         14611  5 +     17596 TA-------TAA-
i Cercopithecus_pogonias.k141_822820                     C 0 I 1
s Cercopithecus_roloway.k141_2581234                           658  5 +     14005 CA-------TAA-
i Cercopithecus_roloway.k141_2581234                     C 0 I 1
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             503  6 -      8501 TC-------AAAA
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             21096  6 -     52598 CC-------AAAA
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16461  6 +     57038 CC-------AAAA
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1252848  6 +   2543920 TT-------GAAT
i Chinchilla_lanigera.JH722012.1                         I 21 C 0
s Chiropotes_albinasus.k141_2813271                          11078  5 +     11226 TG-------TAA-
i Chiropotes_albinasus.k141_2813271                      C 0 I 1
s Chlorocebus_aethiops.ctg25                              18428595  5 -  18827391 TA-------taa-
i Chlorocebus_aethiops.ctg25                             C 0 I 1
s Chlorocebus_pygerythrus.k141_1025673                       15032  5 -     50209 Ta-------taa-
i Chlorocebus_pygerythrus.k141_1025673                   C 0 I 1
s Chlorocebus_sabaeus.CM001947.1                         135422032  5 + 135778131 TA-------TAA-
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 1
s Choloepus_didactylus.ChoDid_scaffold_45914                 18281  6 +     19366 TC-------ACAG
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            173357  6 +    839153 TC-------ACAG
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1910537  5 +   2368649 TA-------TAA-
i Colobus_angolensis.KN981557.1                          C 0 I 1
s Colobus_polykomos.k141_906115                              37075  5 +     84244 TA-------TAA-
i Colobus_polykomos.k141_906115                          C 0 I 1
s Condylura_cristata.JH655891.1                           17548071  6 -  53390261 TT-------GAAA
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14373  6 -     20389 TC-------AAAA
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 50284  6 +     63868 ga-------aaaa
i Cricetomys_gambianus.CriGam_scaffold_18520             I 135 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               2936  6 -     19598 TT-------GAAA
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28462  6 -     87169 TC-------AAAA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837129  6 +   1526836 TT-------AAAA
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 5 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35806  6 +     51376 TT-------GAAT
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 18 C 0
s Dasypus_novemcinctus.JH564415.1                            63510  6 +   2246927 TC-------AAAA
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537315  6 -  12879189 CC-------CAAA
i Daubentonia_madagascariensis.ctg71                     I 15 C 0
s Desmodus_rotundus.KZ672289.1                             8630097  6 +  20541912 TC-------GAAA
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673257  6 +   1390856 TT-------GAAA
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6009  6 +    198055 TT-------GAAA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36441  6 +     67921 TT-------GCAT
i Dinomys_branickii.DinBra_scaffold_21862                I 21 C 0
s Echinops_telfairi.JH980293.1                            48780375  1 + 111700974 ------------A
i Echinops_telfairi.JH980293.1                           I 4 C 0
s Eidolon_helvum.KE759718.1                                  10500  6 +     11740 TC-------AAAA
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1097691  6 +  10337057 TC-------ACCA
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16329280  6 -  41312741 TC-------AAAA
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2145687  6 -  14770903 TC-------AGAA
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1283516  6 +   4378816 TC-------GAAA
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18531337  6 -  39960074 TC-------GAAA
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               33365  6 +    498745 TC-------GAAA
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3328214  6 -   7059049 TT-------GAAA
i Erinaceus_europaeus.JH835339.1                         I 5 C 0
s Erythrocebus_patas.Contig38                             21205202  5 -  21539334 TA-------Taa-
i Erythrocebus_patas.Contig38                            C 0 I 1
s Eulemur_albifrons.k141_342033                              13820  6 -     14127 CC-------AAAT
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6523  6 -     16928 CC-------AAAT
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15547  6 -     25546 CC-------AAAT
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12751  6 +     26330 CC-------AAAT
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 13986  6 +     23973 CC-------AAAT
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12748  6 +     75513 CC-------AAAT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10678  6 +     97555 CC-------AAAT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              169  6 +     13026 CC-------AAAT
i Eulemur_rubriventer.k141_774594                        N 0 C 0
s Eulemur_rufus.k141_1476633                                  4222  6 -     17153 CC-------AAAT
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13795  6 +    111500 CC-------AAAT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20236942  6 + 206538554 TC-------AGAA
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195785  6 + 205367284 TC-------AGAA
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  9529  6 -     36744 TC-------AGAA
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             850474  6 +   3816255 TT-------GAAT
i Fukomys_damarensis.KN121974.1                          I 21 I 1
s Galago_moholi.ctg2040                                     426648  6 -    453645 CC-------CAAA
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4339  6 +     11339 CC-------CAAA
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            1652  6 +     41679 CC-------CAAA
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1198  6 -      9135 TT-------AAAA
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              15985  5 -     32273 TG-------TAA-
i Gorilla_beringei.k141_3596273                          C 0 I 1
s Gorilla_gorilla.LT578341.1                             186338131  5 + 186649187 TG-------TAA-
i Gorilla_gorilla.LT578341.1                             C 0 I 1
s Hapalemur_alaotrensis.k141_170648                           6859  6 -     19426 CC-------AAAA
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12008  6 -     15286 CC-------AAAA
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13647  6 +     18253 CC-------AAAA
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13748  6 -     41752 CC-------AAAA
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13585  6 -     16460 CC-------AAAA
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242295  6 +    327341 TC-------AAAA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20662263  6 +  22651954 TT-------GAAT
i Heterocephalus_glaber.JH602082.1                       I 18 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                 871  6 +      7595 TC-------ACCA
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hoolock_leuconedys.ctg274                                    434797  5 +    630532 TG-------TAA-
i Hoolock_leuconedys.ctg274                                 C 0 I 1
s Hyaena_hyaena.HyaHya_flattened_line_26932                  44989  6 +     55795 TC-------AAAA
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83154  6 +    135385 TT-------GAAT
i Hystrix_cristata.HysCri_scaffold_5660                  I 5 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7520910 13 -   7955117 TTAAGTTGAAAAA
i Ictidomys_tridecemlineatus.JH393364.1                  I 5 C 0
s Indri_indri.k141_3655594                                   22538  6 +     31101 CC-------AAAA
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8276893  1 -   9596543 ------------A
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    14103  6 -     42476 TC-------AGAA
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15524100  6 -  30322482 CC-------AAAA
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7463  5 +     64341 TG-------TAA-
i Leontocebus_fuscicollis.k141_1820339                   C 0 I 1
s Leontocebus_illigeri.k141_3350179                           4786  5 +      4941 TG-------TAA-
i Leontocebus_illigeri.k141_3350179                      C 0 I 1
s Leontocebus_nigricollis.k141_4610752                        7504  5 +     35603 TG-------TAA-
i Leontocebus_nigricollis.k141_4610752                   C 0 I 1
s Leontopithecus_chrysomelas.k141_1519602                    28965  5 +     38576 TG-------TAA-
i Leontopithecus_chrysomelas.k141_1519602                C 0 I 1
s Leontopithecus_rosalia.k141_464620                         25662  5 +     66356 TG-------TAA-
i Leontopithecus_rosalia.k141_464620                     C 0 I 1
s Lepilemur_ankaranensis.k141_596936                         10994  6 -     23766 CC-------AAAA
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29055  6 +     45836 CC-------AAAA
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1595  6 +     25010 CC-------AAAA
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      26991  6 +     54090 CC-------AAAA
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3042817  6 +   3914936 TC-------AAAA
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6470  6 -     14121 TC-------AAAA
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437151  5 +   1826925 TA-------TAA-
i Lophocebus_aterrimus.ctg367                            C 0 I 1
s Loris_lydekkerianus.k141_2539221                            5896  6 +     11245 CC-------CAAA
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004716  6 +   6120653 CC-------CAAA
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4217299  6 -  43346337 TC-------ACCA
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17955089  6 -  59628241 TC-------AAAA
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               6961  5 +     40492 TA-------TAA-
i Macaca_arctoides.k141_2326796                          C 0 I 1
s Macaca_assamensis.Contig5                               59676220  5 +  60120075 TA-------TAA-
i Macaca_assamensis.Contig5                              C 0 I 1
s Macaca_cyclopis.k119_18836                                 12733  5 -     26193 TA-------Taa-
i Macaca_cyclopis.k119_18836                             C 0 I 1
s Macaca_fascicularis.k141_814140                            80517  5 -    114318 TA-------Taa-
i Macaca_fascicularis.k141_814140                        C 0 I 1
s Macaca_fuscata.k119_255327                                  6208  5 -     23192 TA-------taa-
i Macaca_fuscata.k119_255327                             C 0 I 1
s Macaca_leonina.k141_3550399                                15677  5 -     29190 TA-------Taa-
i Macaca_leonina.k141_3550399                            C 0 I 1
s Macaca_maura.k141_2733130                                  24242  5 +     37952 TA-------TAA-
i Macaca_maura.k141_2733130                              C 0 I 1
s Macaca_mulatta.NC_041758.1                             186839331  5 + 187317192 TA-------TAA-
i Macaca_mulatta.NC_041758.1                             C 0 I 1
s Macaca_nemestrina.KQ007038.1                            25457894  5 -  25927173 TA-------TAA-
i Macaca_nemestrina.KQ007038.1                           C 0 I 1
s Macaca_nigra.k141_1655396                                  80090  5 +     89720 TA-------TAA-
i Macaca_nigra.k141_1655396                              C 0 I 1
s Macaca_radiata.k141_3680011                                 7091  5 +     20474 TA-------TAA-
i Macaca_radiata.k141_3680011                            C 0 I 1
s Macaca_siberu.k141_635500                                   6891  5 -     14993 TA-------TAA-
i Macaca_siberu.k141_635500                              C 0 I 1
s Macaca_silenus.Contig273                                  329757  5 -    668171 ta-------taa-
i Macaca_silenus.Contig273                               C 0 I 1
s Macaca_thibetana.k99_256239                                 5207  5 -     24072 TA-------TAA-
i Macaca_thibetana.k99_256239                            C 0 I 1
s Macaca_tonkeana.k141_1498238                               25829  5 -     45290 TA-------Taa-
i Macaca_tonkeana.k141_1498238                           C 0 I 1
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90591  6 +     94391 TC-------AAAA
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 10 C 0
s Mandrillus_leucophaeus.scaffold280                      23937424  5 -  24302211 ta-------taa-
i Mandrillus_leucophaeus.scaffold280                     C 0 I 1
s Mandrillus_sphinx.Contig270                               351552  5 +    752769 TA-------TAA-
i Mandrillus_sphinx.Contig270                            C 0 I 1
s Manis_javanica.JSZB01003497.1                              18477  6 +    737560 TC-------AAAA
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              50466  6 -    317179 TC-------AAAA
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33103106 13 -  40650429 TTAAGTTGAAAAA
i Marmota_marmota.CZRN01000018.1                         I 5 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        10308  6 -    207569 TC-------AAAA
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10017  6 +     13704 TC-------AAAA
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mico_argentatus.k141_1239457                                5741  6 -      7380 tg-------taaa
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               4814  6 +     18990 TG-------TAAA
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      5753  6 -      7356 tg-------taaa
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18291520  6 -  93316391 CC-------AAAA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    22122  1 -    145209 ------------A
i Microgale_talazaci.MicTal_scaffold_6613                I 4 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                15624  5 -     19307 TT-------GAA-
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 1
s Miniopterus_natalensis.LDJU01000034.1                    1850599  5 +   8254450 TC-------AAA-
i Miniopterus_natalensis.LDJU01000034.1                  I 7 I 1
s Miniopterus_schreibersii.MinSch_scaffold_18080             34280  5 +     64694 TC-------AAA-
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 1
s Miopithecus_ogouensis.k141_534055                           9149  6 -     28506 TA-------TAAA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         5685  6 -      8324 TC-------AAAA
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      9065  6 -     37649 CC-------AAAA
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141589  6 -    366855 TT-------GAAA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35394  6 +     37127 TC-------AAAA
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           6784  6 +     14753 TC-------AGAA
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mustela_putorius.JH418006.1                               301208  6 -  14710649 TC-------AAAA
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71285  6 -     80779 TG-------GAAT
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 18 C 0
s Myotis_brandtii.KE162005.1                                280427  6 -  10118263 TC-------AGAA
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1587695  6 -   6019432 TC-------AGAA
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3903781  6 -   4330536 TC-------AGAA
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_482318                         455  6 -       721 TC-------AGAA
i Myotis_myotis.MyoMyo_scaffold_482318                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189232  6 +    196477 TC-------AAAA
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2034160  2 -   3037898 -----------AA
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               15124  5 +     21681 TA-------TAA-
i Nasalis_larvatus.k141_413338                           C 0 I 1
s Neomonachus_schauinslandi.NINY01007730.1                20306939  6 +  31847680 TC-------AAAA
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149351  6 -   9404916 TC-------AAAA
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102586261  6 - 196305487 CC-------CAAA
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              185  6 +      2075 CC-------CAAA
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761615  6 + 199412804 CC-------CAAA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1363494  6 +   3988456 CC-------AAAA
i Ochotona_princeps.JH802162.1                           C 0 I 2
s Octodon_degus.JH651603.1                                  746895  6 +  11899542 TT-------GAAT
i Octodon_degus.JH651603.1                               I 18 C 0
s Odobenus_rosmarus.KB229312.1                              506624  6 -   2017862 TC-------AAAA
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9817  6 -     18566 TA-------CCAA
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147351  6 + 174332312 TC-------AAAA
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462319  6 -    559221 TC-------AAAA
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4180  6 +      8798 CC-------CAAA
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696343  6 -   1103335 CC-------CAAA
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    44078  5 +     80009 TG-------TAA-
i Pan_paniscus.KQ411613.1                                C 0 I 1
s Pan_troglodytes.NBAG03001836.1                             30003  5 +     51860 TG-------TAA-
i Pan_troglodytes.NBAG03001836.1                         C 0 I 1
s Panthera_onca.PanOnc_flattened_line_3271                  151144  6 +    230217 TC-------AGAA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                264353  6 +  18783137 TC-------AGAA
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4721232  6 -   8748460 TC-------AGAA
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183443174  5 + 183742232 TA-------TAA-
i Papio_anubis.CM001495.2                                C 0 I 1
s Papio_cynocephalus.k141_4307930                             6872  5 +     20448 TA-------TAA-
i Papio_cynocephalus.k141_4307930                        C 0 I 1
s Papio_hamadryas.Contig39                                20563680  5 +  20919399 TA-------TAA-
i Papio_hamadryas.Contig39                               C 0 I 1
s Papio_kindae.k141_1936966                                   5616  5 +     41871 TA-------TAA-
i Papio_kindae.k141_1936966                              C 0 I 1
s Papio_papio.k141_802527                                     8901  5 +     27711 TA-------TAA-
i Papio_papio.k141_802527                                C 0 I 1
s Papio_ursinus.k141_3428135                                  8982  5 +      9205 TA-------TAA-
i Papio_ursinus.k141_3428135                             C 0 I 1
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12626  6 -     78924 TC-------AAAA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10150  6 +     13100 CC-------CAAA
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8556  6 +     25941 CC-------CAAA
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28172  6 -     29689 TT-------GAAT
i Petromus_typicus.PetTyp_scaffold_42190                 I 18 C 0
s Piliocolobus_badius.k141_1234363                           43635  5 +     62158 TG-------TAA-
i Piliocolobus_badius.k141_1234363                       C 0 I 1
s Piliocolobus_gordonorum.k141_381342                        38366  5 +     89929 TG-------TAA-
i Piliocolobus_gordonorum.k141_381342                    C 0 I 1
s Piliocolobus_kirkii.k141_448987                            39782  5 +     51399 TG-------TAA-
i Piliocolobus_kirkii.k141_448987                        C 0 I 1
s Piliocolobus_tephrosceles.PDMG02000141.1                14296020  5 -  14605196 TG-------TAA-
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 1
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1731  6 +     22620 TC-------AGAA
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189131120  5 + 189387572 TG-------TAA-
i Pongo_abelii.CM009266.2                                C 0 I 1
s Pongo_pygmaeus.ctg66                                     9570728  6 +   9816681 TG-------TAAA
i Pongo_pygmaeus.ctg66                                   C 0 I 1
s Presbytis_comata.k141_677006                               73304  5 -     81375 TA-------Taa-
i Presbytis_comata.k141_677006                           C 0 I 1
s Presbytis_mitrata.k141_1087752                              5124  5 +     19060 TA-------TAA-
i Presbytis_mitrata.k141_1087752                         C 0 I 1
s Procavia_capensis.ProCapCap_scaffold_85530                 13326  6 -     22811 TC-------ACCA
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2596780  6 -   4620579 CC-------AAAA
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990761  6 +   2598838 CC-------AAAA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29073  6 +     38485 CC-------AAAA
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1116  6 -     13098 CA-------AAAA
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26594  6 +     35766 CA-------AAAA
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4781  6 -     24134 CA-------AAAA
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28606  6 -     67325 CC-------AAAA
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4829  6 -      6182 CC-------AAAA
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            15042  6 -     21811 TC-------GAGA
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40207  6 +     42204 TC-------AAAA
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22976759  6 +  28871421 TC-------AAAA
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                6812  6 -      8028 TC-------AAAA
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20274298  6 -  38429054 TC-------AGAA
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15133  5 -     91421 TA-------TAA-
i Pygathrix_cinerea.k141_1153803                         C 0 I 1
s Pygathrix_nigripes_b.ctg100                                 7609253  5 +   7812017 TA-------TAA-
i Pygathrix_nigripes_b.ctg100                               C 0 I 1
s Pygathrix_nigripes_a.k141_215492                             15105  5 -     72585 TA-------TAa-
i Pygathrix_nigripes_a.k141_215492                         C 0 I 1
s Rhinopithecus_bieti.k119_217274                             6819  5 -     11128 TA-------TAA-
i Rhinopithecus_bieti.k119_217274                        C 0 I 1
s Rhinopithecus_roxellana.NC_044550.1                     91236172  5 - 195417433 TA-------TAA-
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 1
s Rhinopithecus_strykeri.ctg102                            7671824  5 +   7961872 TA-------TAA-
i Rhinopithecus_strykeri.ctg102                          C 0 I 1
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87780  6 -     96226 TC-------AAAA
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               8140  5 -      8359 tg-------taa-
i Saguinus_bicolor.k141_2619299                          C 0 I 1
s Saguinus_imperator.k141_2524406                             2098  6 +      2197 TG-------TAAA
i Saguinus_imperator.k141_2524406                        C 0 C 0
s Saguinus_inustus.k141_699149                               13517  5 +     13640 TG-------TAA-
i Saguinus_inustus.k141_699149                           C 0 I 1
s Saguinus_labiatus.k141_285685                               8386  5 +      8564 TG-------TAA-
i Saguinus_labiatus.k141_285685                          C 0 I 1
s Saguinus_midas.LG03                                    209469236  5 + 209938924 TG-------TAA-
i Saguinus_midas.LG03                                    C 0 I 1
s Saguinus_mystax.k141_374627                                 7942  5 -      9399 tg-------taa-
i Saguinus_mystax.k141_374627                            C 0 I 1
s Saimiri_boliviensis.NW_024100920.1                     119950854  5 - 121099817 TG-------TAA-
i Saimiri_boliviensis.NW_024100920.1                     C 0 I 1
s Saimiri_cassiquiarensis.k141_2188234                       23310  5 +     46362 TG-------TAA-
i Saimiri_cassiquiarensis.k141_2188234                   C 0 I 1
s Saimiri_macrodon.k141_716185                               23405  5 +     45824 TG-------TAA-
i Saimiri_macrodon.k141_716185                           C 0 I 1
s Saimiri_oerstedii.k141_1487881                             40033  5 -     64574 tg-------taa-
i Saimiri_oerstedii.k141_1487881                         C 0 I 1
s Saimiri_sciureus.k141_2278166                               3039  5 -     23631 tg-------taa-
i Saimiri_sciureus.k141_2278166                          C 0 I 1
s Saimiri_ustus.k141_1484609                                 23301  5 -     61129 TG-------Taa-
i Saimiri_ustus.k141_1484609                             C 0 I 1
s Sapajus_apella.ctg103                                    5420624  5 -   5703754 tg-------taa-
i Sapajus_apella.ctg103                                  C 0 I 1
s Sapajus_macrocephalus.k141_351809                          55665  5 -     80660 tg-------taa-
i Sapajus_macrocephalus.k141_351809                      C 0 I 1
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153188  6 -    313613 TT-------GAAA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          19644  5 -     19888 TA-------TAA-
i Semnopithecus_entellus.k141_11662                      C 0 I 1
s Semnopithecus_hypoleucos.k141_1615806                      26847  5 +     39453 TA-------TAA-
i Semnopithecus_hypoleucos.k141_1615806                  C 0 I 1
s Semnopithecus_johnii.k141_670120                            7366  5 +     27826 TA-------TAA-
i Semnopithecus_johnii.k141_670120                       C 0 I 1
s Semnopithecus_priam.k141_638794                             6887  5 -     19483 TA-------Taa-
i Semnopithecus_priam.k141_638794                        C 0 I 1
s Semnopithecus_schistaceus.k141_1584426                      6955  5 +      7198 TA-------TAA-
i Semnopithecus_schistaceus.k141_1584426                 C 0 I 1
s Semnopithecus_vetulus.k141_1200928                         15213  5 +     15514 TA-------TAA-
i Semnopithecus_vetulus.k141_1200928                     C 0 I 1
s Solenodon_paradoxus.SolPar_flattened_line_126               3748  6 +   1910179 TT-------GAAA
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13650994  6 -  18376816 TT-------GAAA
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1953961 13 -   3870691 TTAAGTTGAAAAA
i Spermophilus_dauricus.KZ294078.1                       I 5 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30708  6 +     97271 TC-------AAAA
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 18 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              18295  6 -    196729 TC-------AAAA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6810470  6 +  69701581 TT-------GACA
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                10772  6 +     41958 TC-------ACAA
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72593  6 +    116680 TC-------AAAA
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118725  6 -    156842 TC-------AAAA
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387182  6 +    539355 TC-------AAAA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               26400  6 +     70052 tg-------gaaa
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1233  6 -     16117 tg-------gaaa
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428544  5 + 186847797 TA-------TAA-
i Theropithecus_gelada.CM009954.1                        C 0 I 1
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105486  6 +    114563 TT-------GAAT
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 18 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   6376  6 +      8208 TC-------AAAA
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81163  6 +    610378 TC-------GAAA
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         10938  5 -     20410 TA-------TAA-
i Trachypithecus_auratus.k141_722599                     C 0 I 1
s Trachypithecus_crepusculus.k141_1194022                    15132  6 +     15221 TA-------TAAA
i Trachypithecus_crepusculus.k141_1194022                I 50 I 15
s Trachypithecus_cristatus.k141_580354                       11039  5 +     19930 TA-------TAA-
i Trachypithecus_cristatus.k141_580354                   C 0 I 1
s Trachypithecus_francoisi.k141_1412647                       7466  5 -     19997 TA-------TAA-
i Trachypithecus_francoisi.k141_1412647                  C 0 I 1
s Trachypithecus_geei.k141_277701                            47590  5 -     60166 TA-------Taa-
i Trachypithecus_geei.k141_277701                        C 0 I 1
s Trachypithecus_germaini.k141_912491                        15061  5 -     27529 TA-------TAA-
i Trachypithecus_germaini.k141_912491                    C 0 I 1
s Trachypithecus_hatinhensis.k141_143409                     15005  5 -     18194 TA-------TAA-
i Trachypithecus_hatinhensis.k141_143409                 C 0 I 1
s Trachypithecus_laotum.k141_907409                           8733  5 -     21137 TA-------TAA-
i Trachypithecus_laotum.k141_907409                      C 0 I 1
s Trachypithecus_leucocephalus.k141_587342                    7436  5 -     10723 TA-------TAA-
i Trachypithecus_leucocephalus.k141_587342               C 0 I 1
s Trachypithecus_melamera.k141_434728                         6592  5 +      9834 TA-------TAA-
i Trachypithecus_melamera.k141_434728                    C 0 I 1
s Trachypithecus_obscurus.k141_190785                        24905  5 +     32220 TA-------TAA-
i Trachypithecus_obscurus.k141_190785                    C 0 I 1
s Trachypithecus_phayrei.ctg124                            5939007  5 +   6242583 TA-------TAA-
i Trachypithecus_phayrei.ctg124                          C 0 I 1
s Trachypithecus_pileatus.k141_2007326                        8259  5 +     20839 TA-------TAA-
i Trachypithecus_pileatus.k141_2007326                   C 0 I 1
s Trichechus_manatus.JH594705.1                            4293225  6 +  10818551 TC-------acca
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2155650  3 +   4065304 ----------AAA
i Tupaia_chinensis.KB320699.1                            I 5 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9301  3 -     10553 ----------AAA
i Tupaia_tana.TupTan_flattened_line_97126                I 5 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   53294  6 -     77625 TT-------GAAA
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4850413  6 -   5085361 TC-------AAAA
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  11440  6 +     50397 CC-------AAAA
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11499  6 +     24756 CC-------AAAA
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371851  6 -   5488506 TT-------GAAA
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10764  6 -     43706 TC-------AAAA
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          1101 13 +    224448 TTAAGTTGAAAAA
i Xerus_inauris.XerIna_scaffold_2302                     I 5 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          5337  6 +     86975 TC-------AAAA
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      14989  1 +     63895 ------------A
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Mus_pahari.LT608297.1                                   31355110  4 -  89631738 I
e Mus_spretus.CM004101.1                                  90752512  4 - 130317789 I
e Mus_musculus.chr8                                       87650451  4 - 129401213 I
e Mus_caroli.LT608237.1                                   84361453  4 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Sigmodon_hispidus.SigHis_scaffold_42075                      411  4 -     30804 I
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570713  4 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Psammomys_obesus.NESX01036370.1                            10483  4 -     21651 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Peromyscus_maniculatus.KI615324.1                       18194865  4 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80239  4 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   25239  4 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11260571  4 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182333  4 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 32827 16 +    140813 I
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Ellobius_talpinus.LOJH01081419.1                             523  4 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          20392  4 -    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cricetulus_griseus.LT883664.1                           11667658  4 + 224834208 I
e Colobus_guereza.LG01                                   199948958  0 + 200372422 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Castor_canadensis.CasCan_scaffold_2074                    137136  2 +    179628 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     70877 18 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       6736 2 +     62944 CC
s Acinonyx_jubatus.LLWD01001279.1                           827297 1 -   1699592 T-
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 2
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510558 1 -  29979442 T-
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 2
s Ailurus_fulgens.LNAC01001112.1                             79328 1 -    347723 T-
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 2
s Allactaga_bullata.AllBul_scaffold_9566                     74593 1 -     89534 C-
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 2
s Allenopithecus_nigroviridis.k141_3361533                   14665 2 -     52922 cc
i Allenopithecus_nigroviridis.k141_3361533               I 1 I 112
s Allochrocebus_lhoesti.k141_4309873                         14601 2 -     28001 cc
i Allochrocebus_lhoesti.k141_4309873                     I 1 I 92
s Allochrocebus_preussi.k141_1442296                          5097 2 -     18505 cc
i Allochrocebus_preussi.k141_1442296                     I 1 I 92
s Allochrocebus_solatus.k141_166128                           5951 2 -     12518 cc
i Allochrocebus_solatus.k141_166128                      I 1 I 92
s Alouatta_belzebul.k141_3560514                              7417 2 +     51355 CC
i Alouatta_belzebul.k141_3560514                         I 1 I 112
s Alouatta_caraya.k141_1701091                                 539 2 -     36483 cc
i Alouatta_caraya.k141_1701091                           I 1 I 108
s Alouatta_discolor.k141_743489                               3603 2 -     45847 CC
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                24808 2 +     25266 CC
i Alouatta_juara.k141_1509701                            I 6 I 109
s Alouatta_macconnelli.k141_918386                             533 2 -      9457 cc
i Alouatta_macconnelli.k141_918386                       I 1 I 105
s Alouatta_nigerrima.k141_3472759                            18111 2 -     18578 cc
i Alouatta_nigerrima.k141_3472759                        I 1 I 113
s Alouatta_palliata.k141_2135620                              3510 2 +     47717 CC
i Alouatta_palliata.k141_2135620                         I 1 I 98
s Alouatta_puruensis.k141_362188                               207 2 +      5663 CC
i Alouatta_puruensis.k141_362188                         I 1 I 109
s Alouatta_seniculus.k141_117119                             14827 2 +     50774 CC
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185323 1 +    412891 C-
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 2
s Aotus_azarae.k141_3104676                                  15452 2 -     33861 cc
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            15472 2 -     34016 cc
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297869 2 -   5030052 CC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             15474 2 -     34685 cc
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28598 2 -     47192 cc
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      12657 1 +     20879 C-
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 7
s Arctocebus_calabarensis.k141_2318572                       11520 1 +     14667 C-
i Arctocebus_calabarensis.k141_2318572                   C 0 I 2
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4732 1 +     43469 C-
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 2
s Avahi_laniger.k141_765380                                  53723 1 -     92717 C-
i Avahi_laniger.k141_765380                              C 0 I 2
s Avahi_peyrierasi.k141_1424874                              54350 1 +     85213 C-
i Avahi_peyrierasi.k141_1424874                          C 0 I 2
s Callibella_humilis.k141_1278103                             5207 2 -     10423 cc
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             24679 2 +     31915 CC
i Callimico_goeldii.k141_1091182                         I 1 C 0
s Callithrix_geoffroyi.k119_512088                            5173 2 +      5267 CC
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590387 2 - 189096842 cc
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             11918 2 -     12001 CC
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002354 1 -  17673402 C-
i Camelus_bactrianus.KN276810.1                          C 0 I 2
s Camelus_dromedarius.KN272107.1                           2334812 1 -   7040546 C-
i Camelus_dromedarius.KN272107.1                         C 0 I 2
s Camelus_ferus.KB017975.1                                  403095 1 -   1652518 C-
i Camelus_ferus.KB017975.1                               C 0 I 2
s CanFam4.chr16                                           17799147 1 -  60362399 T-
i CanFam4.chr16                                          C 0 I 2
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    185204 1 -    185531 T-
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 I 2
s Canis_lupus_dingo.QKWQ01000480.1                         9034590 1 -   9314153 T-
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 2
s Canis_lupus_familiaris.chr16                            17958855 1 -  59632846 T-
i Canis_lupus_familiaris.chr16                           C 0 I 2
s Canis_lupus_orion.HG994398.1                            18500367 1 +  63665305 T-
i Canis_lupus_orion.HG994398.1                           C 0 I 2
s Capromys_pilorides.CapPil_scaffold_65020                    1105 1 -     12242 C-
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 2
s Carlito_syrichta.NW_007247396.1                           201399 2 +    308752 CC
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5090 1 -     11696 C-
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 2
s Catagonus_wagneri.CatWag_scaffold_2839                     92984 1 +    217609 C-
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 2
s Cebuella_niveiventris.k141_1251222                          9832 2 -     11392 cc
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               5930 2 -      7577 cc
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25651959 2 +  26074798 cc
i Cebus_albifrons.Contig27                               I 2 I 432
s Cebus_olivaceus.k141_398305                                 1535 2 +      1777 CC
i Cebus_olivaceus.k141_398305                            I 1 C 0
s Cebus_unicolor.k141_544048                                 49872 2 -     74725 cc
i Cebus_unicolor.k141_544048                             I 1 C 0
s Cephalopachus_bancanus.k141_1423433                         5404 2 +     31688 cc
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12231412 1 +  27778364 C-
i Ceratotherium_simum.JH767749.1                         C 0 I 2
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2439 1 -     25243 C-
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 I 2
s Cercocebus_atys.KQ010504.1                               4475610 2 +   4669795 CC
i Cercocebus_atys.KQ010504.1                             I 1 I 88
s Cercocebus_chrysogaster.k141_393940                        14155 2 -     19203 Cc
i Cercocebus_chrysogaster.k141_393940                    I 1 I 88
s Cercocebus_lunulatus.k141_3342297                            771 2 -     14043 cc
i Cercocebus_lunulatus.k141_3342297                      I 1 I 88
s Cercocebus_torquatus.k141_3057011                           8807 2 +     27781 CC
i Cercocebus_torquatus.k141_3057011                      I 1 I 88
s Cercopithecus_ascanius.k141_1024104                         8972 2 -     20310 cc
i Cercopithecus_ascanius.k141_1024104                    I 1 I 92
s Cercopithecus_cephus.k141_1078548                          11951 2 +     29689 CC
i Cercopithecus_cephus.k141_1078548                      I 1 I 92
s Cercopithecus_diana.k141_1150327                            6705 2 -     20078 cc
i Cercopithecus_diana.k141_1150327                       I 1 I 92
s Cercopithecus_hamlyni.k141_187466                          14628 2 -     27936 cc
i Cercopithecus_hamlyni.k141_187466                      I 1 I 92
s Cercopithecus_lowei.k141_1854285                            3492 2 -     17152 cc
i Cercopithecus_lowei.k141_1854285                       I 1 I 92
s Cercopithecus_albogularis.ctg5                                38817031 2 +  39242232 CC
i Cercopithecus_albogularis.ctg5                               I 1 I 92
s Cercopithecus_mona.ctg39                                21222723 2 -  21565898 cc
i Cercopithecus_mona.ctg39                               I 1 I 92
s Cercopithecus_neglectus.k141_2526306                       39841 2 -     53127 cc
i Cercopithecus_neglectus.k141_2526306                   I 1 I 92
s Cercopithecus_nictitans.k141_1119848                          92 2 +     27489 CC
i Cercopithecus_nictitans.k141_1119848                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14641 2 -     27947 cc
i Cercopithecus_petaurista.k141_807961                   I 1 I 92
s Cercopithecus_pogonias.k141_822820                         14617 2 +     17596 CC
i Cercopithecus_pogonias.k141_822820                     I 1 I 92
s Cercopithecus_roloway.k141_2581234                           664 2 +     14005 CC
i Cercopithecus_roloway.k141_2581234                     I 1 I 92
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             509 1 -      8501 C-
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 I 2
s Cheirogaleus_major.k141_333249                             21102 1 -     52598 C-
i Cheirogaleus_major.k141_333249                         C 0 I 2
s Cheirogaleus_medius.k141_1055463                           16467 1 +     57038 C-
i Cheirogaleus_medius.k141_1055463                       C 0 I 2
s Chinchilla_lanigera.JH722012.1                           1252854 1 +   2543920 C-
i Chinchilla_lanigera.JH722012.1                         C 0 I 2
s Chiropotes_albinasus.k141_2813271                          11084 2 +     11226 CC
i Chiropotes_albinasus.k141_2813271                      I 1 I 100
s Chlorocebus_aethiops.ctg25                              18428601 2 -  18827391 cc
i Chlorocebus_aethiops.ctg25                             I 1 I 92
s Chlorocebus_pygerythrus.k141_1025673                       15038 2 -     50209 cc
i Chlorocebus_pygerythrus.k141_1025673                   I 1 I 92
s Chlorocebus_sabaeus.CM001947.1                         135422038 2 + 135778131 CC
i Chlorocebus_sabaeus.CM001947.1                         I 1 I 92
s Choloepus_didactylus.ChoDid_scaffold_45914                 18287 1 +     19366 C-
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 I 2
s Choloepus_hoffmanni.KN194906.1                            173363 1 +    839153 C-
i Choloepus_hoffmanni.KN194906.1                         C 0 I 2
s Colobus_angolensis.KN981557.1                            1910543 2 +   2368649 CC
i Colobus_angolensis.KN981557.1                          I 1 I 96
s Colobus_polykomos.k141_906115                              37081 2 +     84244 CC
i Colobus_polykomos.k141_906115                          I 1 I 92
s Condylura_cristata.JH655891.1                           17548077 1 -  53390261 C-
i Condylura_cristata.JH655891.1                          C 0 I 2
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14379 1 -     20389 C-
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 2
s Cricetomys_gambianus.CriGam_scaffold_18520                 50290 1 +     63868 c-
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 2
s Crocidura_indochinensis.CroInd_scaffold_37019               2942 1 -     19598 T-
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 I 2
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28468 1 -     87169 T-
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 2
s Ctenodactylus_gundi.CteGun_scaffold_65                    837135 1 +   1526836 C-
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 2
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35812 1 +     51376 C-
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 2
s Dasypus_novemcinctus.JH564415.1                            63516 1 +   2246927 C-
i Dasypus_novemcinctus.JH564415.1                        C 0 I 2
s Daubentonia_madagascariensis.ctg71                      12537321 1 -  12879189 C-
i Daubentonia_madagascariensis.ctg71                     C 0 I 2
s Desmodus_rotundus.KZ672289.1                             8630103 1 +  20541912 C-
i Desmodus_rotundus.KZ672289.1                           C 0 I 2
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673263 1 +   1390856 C-
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 2
s Diceros_bicornis.DicBicMic_scaffold_5955                    6015 1 +    198055 C-
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 2
s Dinomys_branickii.DinBra_scaffold_21862                    36447 1 +     67921 C-
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 2
s Echinops_telfairi.JH980293.1                            48780376 1 + 111700974 C-
i Echinops_telfairi.JH980293.1                           C 0 I 2
s Eidolon_helvum.KE759718.1                                  10506 1 +     11740 C-
i Eidolon_helvum.KE759718.1                              C 0 I 2
s Elephantulus_edwardii.JH947257.1                         1097697 1 +  10337057 C-
i Elephantulus_edwardii.JH947257.1                       C 0 I 2
s Enhydra_lutris.KZ291758.1                               16329286 1 -  41312741 T-
i Enhydra_lutris.KZ291758.1                              C 0 I 2
s Eptesicus_fuscus.JH977646.1                              2145693 1 -  14770903 C-
i Eptesicus_fuscus.JH977646.1                            C 0 I 2
s Equus_asinus.JREZ01000139.1                              1283522 1 +   4378816 C-
i Equus_asinus.JREZ01000139.1                            C 0 I 2
s Equus_caballus.CM000403.2                               18531343 1 -  39960074 C-
i Equus_caballus.CM000403.2                              C 0 I 2
s Equus_przewalskii.KK951119.1                               33371 1 +    498745 C-
i Equus_przewalskii.KK951119.1                           C 0 I 2
s Erinaceus_europaeus.JH835339.1                           3328220 1 -   7059049 T-
i Erinaceus_europaeus.JH835339.1                         C 0 I 2
s Erythrocebus_patas.Contig38                             21205208 2 -  21539334 cc
i Erythrocebus_patas.Contig38                            I 1 I 92
s Eulemur_albifrons.k141_342033                              13826 1 -     14127 C-
i Eulemur_albifrons.k141_342033                          C 0 I 2
s Eulemur_collaris.k141_377015                                6529 1 -     16928 C-
i Eulemur_collaris.k141_377015                           C 0 I 2
s Eulemur_coronatus.k141_885031                              15553 1 -     25546 C-
i Eulemur_coronatus.k141_885031                          C 0 I 2
s Eulemur_flavifrons.k141_1184614                            12757 1 +     26330 C-
i Eulemur_flavifrons.k141_1184614                        C 0 I 2
s Eulemur_fulvus.k141_544389                                 13992 1 +     23973 C-
i Eulemur_fulvus.k141_544389                             C 0 I 2
s Eulemur_macaco.k141_1562045                                12754 1 +     75513 C-
i Eulemur_macaco.k141_1562045                            C 0 I 2
s Eulemur_mongoz.k141_232305                                 10684 1 +     97555 C-
i Eulemur_mongoz.k141_232305                             C 0 I 2
s Eulemur_rubriventer.k141_774594                              175 1 +     13026 C-
i Eulemur_rubriventer.k141_774594                        C 0 I 2
s Eulemur_rufus.k141_1476633                                  4228 1 -     17153 C-
i Eulemur_rufus.k141_1476633                             C 0 I 2
s Eulemur_sanfordi.k141_1122526                              13801 1 +    111500 C-
i Eulemur_sanfordi.k141_1122526                          C 0 I 2
s Felis_catus.CM001381.2                                  20236948 1 + 206538554 T-
i Felis_catus.CM001381.2                                 C 0 I 2
s Felis_catus_fca126.CM031415.1                           20195791 1 + 205367284 T-
i Felis_catus_fca126.CM031415.1                          C 0 I 2
s Felis_nigripes.FelNig_flattened_line_20823                  9535 1 -     36744 T-
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 2
s Fukomys_damarensis.KN121974.1                             850481 1 +   3816255 A-
i Fukomys_damarensis.KN121974.1                          I 1 I 2
s Galago_moholi.ctg2040                                     426654 1 -    453645 T-
i Galago_moholi.ctg2040                                  C 0 I 2
s Galago_senegalensis.k141_631886                             4345 1 +     11339 T-
i Galago_senegalensis.k141_631886                        C 0 I 2
s Galagoides_demidoff.k141_1711393                            1658 1 +     41679 C-
i Galagoides_demidoff.k141_1711393                       C 0 I 2
s Galeopterus_variegatus.GalVar_scaffold_108840               1204 1 -      9135 C-
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 I 2
s Gorilla_beringei.k141_3596273                              15991 2 -     32273 CC
i Gorilla_beringei.k141_3596273                          I 1 I 103
s Gorilla_gorilla.LT578341.1                             186338137 2 + 186649187 CC
i Gorilla_gorilla.LT578341.1                             I 1 I 95
s Hapalemur_alaotrensis.k141_170648                           6865 1 -     19426 C-
i Hapalemur_alaotrensis.k141_170648                      C 0 I 2
s Hapalemur_gilberti.k141_488810                             12014 1 -     15286 C-
i Hapalemur_gilberti.k141_488810                         C 0 I 2
s Hapalemur_griseus.k141_1511508                             13653 1 +     18253 C-
i Hapalemur_griseus.k141_1511508                         C 0 I 2
s Hapalemur_meridionalis.k141_248335                         13754 1 -     41752 C-
i Hapalemur_meridionalis.k141_248335                     C 0 I 2
s Hapalemur_occidentalis.k141_907772                         13591 1 -     16460 C-
i Hapalemur_occidentalis.k141_907772                     C 0 I 2
s Helogale_parvula.HelPar_flattened_line_2585               242301 1 +    327341 T-
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 2
s Heterocephalus_glaber.JH602082.1                        20662269 1 +  22651954 C-
i Heterocephalus_glaber.JH602082.1                       C 0 I 2
s Heterohyrax_brucei.HetBruBak_scaffold_122365                 877 1 +      7595 T-
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 I 2
s Hoolock_leuconedys.ctg274                                    434803 2 +    630532 CC
i Hoolock_leuconedys.ctg274                                 I 1 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  44995 1 +     55795 T-
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 2
s Hystrix_cristata.HysCri_scaffold_5660                      83160 1 +    135385 C-
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 2
s Ictidomys_tridecemlineatus.JH393364.1                    7520923 1 -   7955117 C-
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 2
s Indri_indri.k141_3655594                                   22544 1 +     31101 C-
i Indri_indri.k141_3655594                               C 0 I 2
s Jaculus_jaculus.JH725527.1                               8276894 1 -   9596543 A-
i Jaculus_jaculus.JH725527.1                             C 0 I 2
s Lasiurus_borealis.LasBor_scaffold_32767                    14109 1 -     42476 C-
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 2
s Lemur_catta.scaffold_24                                 15524106 1 -  30322482 C-
i Lemur_catta.scaffold_24                                C 0 I 2
s Leontocebus_fuscicollis.k141_1820339                        7469 2 +     64341 CC
i Leontocebus_fuscicollis.k141_1820339                   I 1 C 0
s Leontocebus_illigeri.k141_3350179                           4792 2 +      4941 CC
i Leontocebus_illigeri.k141_3350179                      I 1 C 0
s Leontocebus_nigricollis.k141_4610752                        7510 2 +     35603 CC
i Leontocebus_nigricollis.k141_4610752                   I 1 C 0
s Leontopithecus_chrysomelas.k141_1519602                    28971 2 +     38576 CC
i Leontopithecus_chrysomelas.k141_1519602                I 1 C 0
s Leontopithecus_rosalia.k141_464620                         25668 2 +     66356 CC
i Leontopithecus_rosalia.k141_464620                     I 1 C 0
s Lepilemur_ankaranensis.k141_596936                         11000 1 -     23766 C-
i Lepilemur_ankaranensis.k141_596936                     C 0 I 2
s Lepilemur_dorsalis.k141_577674                             29061 1 +     45836 C-
i Lepilemur_dorsalis.k141_577674                         C 0 I 2
s Lepilemur_ruficaudatus.k141_121139                          1601 1 +     25010 C-
i Lepilemur_ruficaudatus.k141_121139                     C 0 I 2
s Lepilemur_septentrionalis.k141_185316                      26997 1 +     54090 C-
i Lepilemur_septentrionalis.k141_185316                  C 0 I 2
s Leptonychotes_weddellii.KB714746.1                       3042823 1 +   3914936 T-
i Leptonychotes_weddellii.KB714746.1                     C 0 I 2
s Lepus_americanus.LepAme_scaffold_107385                     6476 1 -     14121 C-
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 2
s Lophocebus_aterrimus.ctg367                              1437157 2 +   1826925 CC
i Lophocebus_aterrimus.ctg367                            I 1 I 84
s Loris_lydekkerianus.k141_2539221                            5902 1 +     11245 C-
i Loris_lydekkerianus.k141_2539221                       C 0 I 2
s Loris_tardigradus.ctg83                                  1004722 1 +   6120653 C-
i Loris_tardigradus.ctg83                                C 0 I 2
s Loxodonta_africana.GL010049.1                            4217305 1 -  43346337 C-
i Loxodonta_africana.GL010049.1                          C 0 I 2
s Lycaon_pictus.CM007581.1                                17955095 1 -  59628241 T-
i Lycaon_pictus.CM007581.1                               C 0 I 2
s Macaca_arctoides.k141_2326796                               6967 2 +     40492 CC
i Macaca_arctoides.k141_2326796                          I 1 C 0
s Macaca_assamensis.Contig5                               59676226 2 +  60120075 CC
i Macaca_assamensis.Contig5                              I 1 C 0
s Macaca_cyclopis.k119_18836                                 12739 2 -     26193 cc
i Macaca_cyclopis.k119_18836                             I 1 C 0
s Macaca_fascicularis.k141_814140                            80523 2 -    114318 cc
i Macaca_fascicularis.k141_814140                        I 1 C 0
s Macaca_fuscata.k119_255327                                  6214 2 -     23192 cc
i Macaca_fuscata.k119_255327                             I 1 C 0
s Macaca_leonina.k141_3550399                                15683 2 -     29190 cc
i Macaca_leonina.k141_3550399                            I 1 C 0
s Macaca_maura.k141_2733130                                  24248 2 +     37952 CC
i Macaca_maura.k141_2733130                              I 1 C 0
s Macaca_mulatta.NC_041758.1                             186839337 2 + 187317192 CC
i Macaca_mulatta.NC_041758.1                             I 1 C 0
s Macaca_nemestrina.KQ007038.1                            25457900 2 -  25927173 CC
i Macaca_nemestrina.KQ007038.1                           I 1 C 0
s Macaca_nigra.k141_1655396                                  80096 2 +     89720 CC
i Macaca_nigra.k141_1655396                              I 1 C 0
s Macaca_radiata.k141_3680011                                 7097 2 +     20474 CC
i Macaca_radiata.k141_3680011                            I 1 C 0
s Macaca_siberu.k141_635500                                   6897 2 -     14993 cc
i Macaca_siberu.k141_635500                              I 1 C 0
s Macaca_silenus.Contig273                                  329763 2 -    668171 cc
i Macaca_silenus.Contig273                               I 1 C 0
s Macaca_thibetana.k99_256239                                 5213 2 -     24072 CC
i Macaca_thibetana.k99_256239                            I 1 C 0
s Macaca_tonkeana.k141_1498238                               25835 2 -     45290 cc
i Macaca_tonkeana.k141_1498238                           I 1 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90597 1 +     94391 C-
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 2
s Mandrillus_leucophaeus.scaffold280                      23937430 2 -  24302211 cc
i Mandrillus_leucophaeus.scaffold280                     I 1 I 88
s Mandrillus_sphinx.Contig270                               351558 2 +    752769 CC
i Mandrillus_sphinx.Contig270                            I 1 I 84
s Manis_javanica.JSZB01003497.1                              18483 1 +    737560 C-
i Manis_javanica.JSZB01003497.1                          C 0 I 2
s Manis_pentadactyla.KN006162.1                              50472 1 -    317179 C-
i Manis_pentadactyla.KN006162.1                          C 0 I 2
s Marmota_marmota.CZRN01000018.1                          33103119 1 -  40650429 C-
i Marmota_marmota.CZRN01000018.1                         C 0 I 2
s Megaderma_lyra.MegLyr_scaffold_4542                        10314 1 -    207569 C-
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 8
s Mellivora_capensis.MelCap_flattened_line_69365             10023 1 +     13704 T-
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 2
s Mico_argentatus.k141_1239457                                5747 2 -      7380 cc
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               4820 2 +     18990 CC
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      5759 2 -      7356 cc
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18291526 1 -  93316391 C-
i Microcebus_murinus.CM007674.1                          C 0 I 2
s Microgale_talazaci.MicTal_scaffold_6613                    22123 1 -    145209 C-
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 2
s Micronycteris_hirsuta.MicHir_scaffold_52381                15630 1 -     19307 C-
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 1 I 2
s Miopithecus_ogouensis.k141_534055                           9155 2 -     28506 cc
i Miopithecus_ogouensis.k141_534055                      C 0 I 76
s Mirounga_angustirostris.MirAng_flattened_line_93702         5691 1 -      8324 T-
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 2
s Mirza_zaza.k141_952172                                      9071 1 -     37649 C-
i Mirza_zaza.k141_952172                                 C 0 I 2
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141595 1 -    366855 C-
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 2
s Mungos_mungo.MunMun_flattened_line_23663                   35400 1 +     37127 T-
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 2
s Murina_feae.MurFea_scaffold_85699                           6790 1 +     14753 C-
i Murina_feae.MurFea_scaffold_85699                      C 0 I 2
s Mustela_putorius.JH418006.1                               301214 1 -  14710649 T-
i Mustela_putorius.JH418006.1                            C 0 I 2
s Myocastor_coypus.MyoCoy_scaffold_10123                     71291 1 -     80779 C-
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 I 2
s Myotis_brandtii.KE162005.1                                280433 1 -  10118263 C-
i Myotis_brandtii.KE162005.1                             C 0 I 2
s Myotis_davidii.KB100139.1                                1587701 1 -   6019432 C-
i Myotis_davidii.KB100139.1                              C 0 I 2
s Myotis_lucifugus.GL429869.1                              3903787 1 -   4330536 C-
i Myotis_lucifugus.GL429869.1                            C 0 I 2
s Myotis_myotis.MyoMyo_scaffold_482318                         461 1 -       721 C-
i Myotis_myotis.MyoMyo_scaffold_482318                   C 0 I 2
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189238 1 +    196477 C-
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 I 2
s Nannospalax_galili.KL204047.1                            2034162 1 -   3037898 C-
i Nannospalax_galili.KL204047.1                          C 0 I 2
s Nasalis_larvatus.k141_413338                               15130 2 +     21681 CC
i Nasalis_larvatus.k141_413338                           I 1 I 96
s Neomonachus_schauinslandi.NINY01007730.1                20306945 1 +  31847680 T-
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 2
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149357 1 -   9404916 T-
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 2
s Nycticebus_bengalensis.LG01                            102586267 1 - 196305487 C-
i Nycticebus_bengalensis.LG01                            C 0 I 2
s Nycticebus_coucang.k141_1127096                              191 1 +      2075 C-
i Nycticebus_coucang.k141_1127096                        C 0 I 2
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761621 1 + 199412804 C-
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 2
s Octodon_degus.JH651603.1                                  746901 1 +  11899542 C-
i Octodon_degus.JH651603.1                               C 0 I 2
s Odobenus_rosmarus.KB229312.1                              506630 1 -   2017862 C-
i Odobenus_rosmarus.KB229312.1                           C 0 I 2
s Orycteropus_afer.OryAfe_flattened_line_144387               9823 1 -     18566 C-
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 I 2
s Oryctolagus_cuniculus.CM000791.1                        67147357 1 + 174332312 C-
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 2
s Otocyon_megalotis.JAEUCK010005147.1                       462325 1 -    559221 T-
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 2
s Otolemur_crassicaudatus.k141_222918                         4186 1 +      8798 C-
i Otolemur_crassicaudatus.k141_222918                    C 0 I 2
s Otolemur_garnettii.GL873799.1                             696349 1 -   1103335 C-
i Otolemur_garnettii.GL873799.1                          C 0 I 2
s Pan_paniscus.KQ411613.1                                    44084 2 +     80009 CC
i Pan_paniscus.KQ411613.1                                I 1 I 99
s Pan_troglodytes.NBAG03001836.1                             30009 2 +     51860 CC
i Pan_troglodytes.NBAG03001836.1                         I 1 I 1
s Panthera_onca.PanOnc_flattened_line_3271                  151150 1 +    230217 T-
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 2
s Panthera_pardus.KV860321.1                                264359 1 +  18783137 T-
i Panthera_pardus.KV860321.1                             C 0 I 2
s Panthera_tigris.KE722367.1                               4721238 1 -   8748460 T-
i Panthera_tigris.KE722367.1                             C 0 I 2
s Papio_anubis.CM001495.2                                183443180 2 + 183742232 CC
i Papio_anubis.CM001495.2                                I 1 I 140
s Papio_cynocephalus.k141_4307930                             6878 2 +     20448 CC
i Papio_cynocephalus.k141_4307930                        I 1 I 88
s Papio_hamadryas.Contig39                                20563686 2 +  20919399 CC
i Papio_hamadryas.Contig39                               I 1 I 92
s Papio_kindae.k141_1936966                                   5622 2 +     41871 CC
i Papio_kindae.k141_1936966                              I 1 I 88
s Papio_papio.k141_802527                                     8907 2 +     27711 CC
i Papio_papio.k141_802527                                I 1 I 96
s Papio_ursinus.k141_3428135                                  8988 2 +      9205 CC
i Papio_ursinus.k141_3428135                             I 1 I 84
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12632 1 -     78924 T-
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 2
s Perodicticus_ibeanus.k141_855320                           10156 1 +     13100 C-
i Perodicticus_ibeanus.k141_855320                       C 0 I 2
s Perodicticus_potto.k141_1092580                             8562 1 +     25941 T-
i Perodicticus_potto.k141_1092580                        C 0 I 2
s Petromus_typicus.PetTyp_scaffold_42190                     28178 1 -     29689 C-
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 I 2
s Piliocolobus_badius.k141_1234363                           43641 2 +     62158 CC
i Piliocolobus_badius.k141_1234363                       I 1 I 80
s Piliocolobus_gordonorum.k141_381342                        38372 2 +     89929 CC
i Piliocolobus_gordonorum.k141_381342                    I 1 I 96
s Piliocolobus_kirkii.k141_448987                            39788 2 +     51399 CC
i Piliocolobus_kirkii.k141_448987                        I 1 I 96
s Piliocolobus_tephrosceles.PDMG02000141.1                14296026 2 -  14605196 CC
i Piliocolobus_tephrosceles.PDMG02000141.1               I 1 I 96
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1737 1 +     22620 C-
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 2
s Pongo_abelii.CM009266.2                                189131126 2 + 189387572 CC
i Pongo_abelii.CM009266.2                                I 1 I 99
s Pongo_pygmaeus.ctg66                                     9570735 1 +   9816681 -C
i Pongo_pygmaeus.ctg66                                   I 1 I 97
s Presbytis_comata.k141_677006                               73310 2 -     81375 cc
i Presbytis_comata.k141_677006                           I 1 I 92
s Presbytis_mitrata.k141_1087752                              5130 2 +     19060 CC
i Presbytis_mitrata.k141_1087752                         I 1 I 92
s Procavia_capensis.ProCapCap_scaffold_85530                 13332 1 -     22811 C-
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 I 2
s Prolemur_simus.MPIZ01000396.1                            2596786 1 -   4620579 C-
i Prolemur_simus.MPIZ01000396.1                          C 0 I 2
s Propithecus_coquerelli.NW_012148875.1                     990767 1 +   2598838 C-
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 2
s Propithecus_coronatus.k141_347390                          29079 1 +     38485 C-
i Propithecus_coronatus.k141_347390                      C 0 I 2
s Propithecus_diadema.k141_58108                              1122 1 -     13098 C-
i Propithecus_diadema.k141_58108                         C 0 I 2
s Propithecus_edwardsi.k141_1176054                          26600 1 +     35766 C-
i Propithecus_edwardsi.k141_1176054                      C 0 I 2
s Propithecus_perrieri.k141_1200571                           4787 1 -     24134 C-
i Propithecus_perrieri.k141_1200571                      C 0 I 2
s Propithecus_tattersalli.k141_790011                        28612 1 -     67325 C-
i Propithecus_tattersalli.k141_790011                    C 0 I 2
s Propithecus_verreauxi.k141_956661                           4835 1 -      6182 C-
i Propithecus_verreauxi.k141_956661                      C 0 I 2
s Pteronotus_parnellii.KE909381.1                            15048 1 -     21811 C-
i Pteronotus_parnellii.KE909381.1                        C 0 I 2
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40213 1 +     42204 T-
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 2
s Pteropus_alecto.KB030862.1                              22976765 1 +  28871421 C-
i Pteropus_alecto.KB030862.1                             C 0 I 2
s Pteropus_vampyrus.KN534172.1                                6818 1 -      8028 C-
i Pteropus_vampyrus.KN534172.1                           C 0 I 2
s Puma_concolor.QAVW01001104.1                            20274304 1 -  38429054 T-
i Puma_concolor.QAVW01001104.1                           C 0 I 2
s Pygathrix_cinerea.k141_1153803                             15139 2 -     91421 cc
i Pygathrix_cinerea.k141_1153803                         I 1 I 96
s Pygathrix_nigripes_b.ctg100                                 7609259 2 +   7812017 CC
i Pygathrix_nigripes_b.ctg100                               I 1 I 96
s Pygathrix_nigripes_a.k141_215492                             15111 2 -     72585 cc
i Pygathrix_nigripes_a.k141_215492                         I 1 I 96
s Rhinopithecus_bieti.k119_217274                             6825 2 -     11128 CC
i Rhinopithecus_bieti.k119_217274                        I 1 I 95
s Rhinopithecus_roxellana.NC_044550.1                     91236178 2 - 195417433 CC
i Rhinopithecus_roxellana.NC_044550.1                    I 1 I 89
s Rhinopithecus_strykeri.ctg102                            7671830 2 +   7961872 CC
i Rhinopithecus_strykeri.ctg102                          I 1 I 95
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87786 1 -     96226 C-
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 2
s Saguinus_bicolor.k141_2619299                               8146 2 -      8359 cc
i Saguinus_bicolor.k141_2619299                          I 1 C 0
s Saguinus_imperator.k141_2524406                             2104 2 +      2197 CC
i Saguinus_imperator.k141_2524406                        C 0 C 0
s Saguinus_inustus.k141_699149                               13523 2 +     13640 CC
i Saguinus_inustus.k141_699149                           I 1 C 0
s Saguinus_labiatus.k141_285685                               8392 2 +      8564 CC
i Saguinus_labiatus.k141_285685                          I 1 C 0
s Saguinus_midas.LG03                                    209469242 2 + 209938924 CG
i Saguinus_midas.LG03                                    I 1 C 0
s Saguinus_mystax.k141_374627                                 7948 2 -      9399 cc
i Saguinus_mystax.k141_374627                            I 1 C 0
s Saimiri_boliviensis.NW_024100920.1                     119950860 2 - 121099817 CC
i Saimiri_boliviensis.NW_024100920.1                     I 1 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23316 2 +     46362 CC
i Saimiri_cassiquiarensis.k141_2188234                   I 1 C 0
s Saimiri_macrodon.k141_716185                               23411 2 +     45824 CC
i Saimiri_macrodon.k141_716185                           I 1 C 0
s Saimiri_oerstedii.k141_1487881                             40039 2 -     64574 cc
i Saimiri_oerstedii.k141_1487881                         I 1 C 0
s Saimiri_sciureus.k141_2278166                               3045 2 -     23631 cc
i Saimiri_sciureus.k141_2278166                          I 1 C 0
s Saimiri_ustus.k141_1484609                                 23307 2 -     61129 cc
i Saimiri_ustus.k141_1484609                             I 1 C 0
s Sapajus_apella.ctg103                                    5420630 2 -   5703754 cc
i Sapajus_apella.ctg103                                  I 1 C 0
s Sapajus_macrocephalus.k141_351809                          55671 2 -     80660 cc
i Sapajus_macrocephalus.k141_351809                      I 1 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153194 1 -    313613 C-
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 2
s Semnopithecus_entellus.k141_11662                          19650 2 -     19888 CC
i Semnopithecus_entellus.k141_11662                      I 1 I 94
s Semnopithecus_hypoleucos.k141_1615806                      26853 2 +     39453 CC
i Semnopithecus_hypoleucos.k141_1615806                  I 1 I 96
s Semnopithecus_johnii.k141_670120                            7372 2 +     27826 CC
i Semnopithecus_johnii.k141_670120                       I 1 I 96
s Semnopithecus_priam.k141_638794                             6893 2 -     19483 cc
i Semnopithecus_priam.k141_638794                        I 1 I 96
s Semnopithecus_schistaceus.k141_1584426                      6961 2 +      7198 CC
i Semnopithecus_schistaceus.k141_1584426                 I 1 I 1
s Semnopithecus_vetulus.k141_1200928                         15219 2 +     15514 CC
i Semnopithecus_vetulus.k141_1200928                     I 1 I 1
s Solenodon_paradoxus.SolPar_flattened_line_126               3754 1 +   1910179 C-
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 2
s Sorex_araneus.JH798187.1                                13651000 1 -  18376816 G-
i Sorex_araneus.JH798187.1                               C 0 I 2
s Spermophilus_dauricus.KZ294078.1                         1953974 1 -   3870691 C-
i Spermophilus_dauricus.KZ294078.1                       C 0 I 2
s Spilogale_gracilis.SpiGra_flattened_line_13525             30714 1 +     97271 T-
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 2
s Suricata_suricatta.SurSur_flattened_line_6629              18301 1 -    196729 T-
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 2
s Sus_scrofa.CM000828.4                                    6810476 1 +  69701581 C-
i Sus_scrofa.CM000828.4                                  C 0 I 2
s Tadarida_brasiliensis.TadBra_scaffold_25820                10778 1 +     41958 T-
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 2
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72599 1 +    116680 C-
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 I 2
s Tapirus_indicus.TapInd_scaffold_9301                      118731 1 -    156842 C-
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 2
s Tapirus_terrestris.TapTer_scaffold_755                    387188 1 +    539355 C-
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 2
s Tarsius_lariang.k141_2201908                               26406 2 +     70052 cc
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1239 2 -     16117 cc
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428550 2 + 186847797 CC
i Theropithecus_gelada.CM009954.1                        I 1 I 88
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105492 1 +    114563 C-
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 2
s Tolypeutes_matacus.TolMat_scaffold_228639                   6382 1 +      8208 C-
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 I 2
s Tonatia_saurophila.TonSau_scaffold_294                     81169 1 +    610378 C-
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 2
s Trachypithecus_auratus.k141_722599                         10944 2 -     20410 Cc
i Trachypithecus_auratus.k141_722599                     I 1 I 96
s Trachypithecus_crepusculus.k141_582567                        58 2 -     12674 cc
i Trachypithecus_crepusculus.k141_582567                 I 6 I 96
s Trachypithecus_cristatus.k141_580354                       11045 2 +     19930 CC
i Trachypithecus_cristatus.k141_580354                   I 1 I 96
s Trachypithecus_francoisi.k141_1412647                       7472 2 -     19997 CC
i Trachypithecus_francoisi.k141_1412647                  I 1 I 80
s Trachypithecus_geei.k141_277701                            47596 2 -     60166 cc
i Trachypithecus_geei.k141_277701                        I 1 I 95
s Trachypithecus_germaini.k141_912491                        15067 2 -     27529 cc
i Trachypithecus_germaini.k141_912491                    I 1 I 96
s Trachypithecus_hatinhensis.k141_143409                     15011 2 -     18194 Cc
i Trachypithecus_hatinhensis.k141_143409                 I 1 I 96
s Trachypithecus_laotum.k141_907409                           8739 2 -     21137 cc
i Trachypithecus_laotum.k141_907409                      I 1 I 80
s Trachypithecus_leucocephalus.k141_587342                    7442 2 -     10723 CC
i Trachypithecus_leucocephalus.k141_587342               I 1 I 80
s Trachypithecus_melamera.k141_434728                         6598 2 +      9834 CC
i Trachypithecus_melamera.k141_434728                    I 1 I 96
s Trachypithecus_obscurus.k141_190785                        24911 2 +     32220 CC
i Trachypithecus_obscurus.k141_190785                    I 1 I 96
s Trachypithecus_phayrei.ctg124                            5939013 2 +   6242583 CC
i Trachypithecus_phayrei.ctg124                          I 1 I 96
s Trachypithecus_pileatus.k141_2007326                        8265 2 +     20839 CC
i Trachypithecus_pileatus.k141_2007326                   I 1 I 95
s Trichechus_manatus.JH594705.1                            4293231 1 +  10818551 c-
i Trichechus_manatus.JH594705.1                          C 0 I 2
s Tupaia_chinensis.KB320699.1                              2155653 1 +   4065304 C-
i Tupaia_chinensis.KB320699.1                            C 0 I 2
s Tupaia_tana.TupTan_flattened_line_97126                     9304 1 -     10553 C-
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 2
s Uropsilus_gracilis.UroGra_scaffold_12083                   53300 1 -     77625 C-
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 2
s Ursus_maritimus.KK499267.1                               4850419 1 -   5085361 T-
i Ursus_maritimus.KK499267.1                             C 0 I 2
s Varecia_rubra.k141_590885                                  11446 1 +     50397 C-
i Varecia_rubra.k141_590885                              C 0 I 2
s Varecia_variegata.k141_1128296                             11505 1 +     24756 C-
i Varecia_variegata.k141_1128296                         C 0 I 2
s Vicugna_pacos.KN270157.1                                 5371857 1 -   5488506 C-
i Vicugna_pacos.KN270157.1                               C 0 I 2
s Vulpes_lagopus.VulLag_flattened_line_30954                 10770 1 -     43706 T-
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 2
s Xerus_inauris.XerIna_scaffold_2302                          1114 1 +    224448 C-
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 2
s Zalophus_californianus.ZalCal_flattened_line_17732          5343 1 +     86975 T-
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 2
s Zapus_hudsonius.ZapHud_scaffold_11398                      14990 1 +     63895 C-
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 2
e Mus_pahari.LT608297.1                                   31355110 4 -  89631738 I
e Mus_spretus.CM004101.1                                  90752512 4 - 130317789 I
e Mus_musculus.chr8                                       87650451 4 - 129401213 I
e Mus_caroli.LT608237.1                                   84361453 4 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sigmodon_hispidus.SigHis_scaffold_42075                      411 4 -     30804 I
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570713 4 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Psammomys_obesus.NESX01036370.1                            10483 4 -     21651 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Peromyscus_maniculatus.KI615324.1                       18194865 4 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80239 4 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   25239 4 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Ochotona_princeps.JH802162.1                             1363500 2 +   3988456 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             34285 1 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1850604 1 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11260571 4 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182333 4 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 32827 16 +    140813 I
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Ellobius_talpinus.LOJH01081419.1                             523 4 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          20392 4 -    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cricetulus_griseus.LT883664.1                           11667658 4 + 224834208 I
e Colobus_guereza.LG01                                   199948958 0 + 200372422 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Castor_canadensis.CasCan_scaffold_2074                    137136 2 +    179628 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     70877 18 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       6738 1 +     62944 A
s Allenopithecus_nigroviridis.k141_3361533                   14779 1 -     52922 a
i Allenopithecus_nigroviridis.k141_3361533               I 112 T 112
s Allochrocebus_lhoesti.k141_4309873                         14695 1 -     28001 a
i Allochrocebus_lhoesti.k141_4309873                     I 92 T 92
s Allochrocebus_preussi.k141_1442296                          5191 1 -     18505 a
i Allochrocebus_preussi.k141_1442296                     I 92 T 92
s Allochrocebus_solatus.k141_166128                           6045 1 -     12518 a
i Allochrocebus_solatus.k141_166128                      I 92 T 92
s Alouatta_belzebul.k141_3560514                              7531 1 +     51355 a
i Alouatta_belzebul.k141_3560514                         I 112 T 112
s Alouatta_caraya.k141_1701091                                 649 1 -     36483 a
i Alouatta_caraya.k141_1701091                           I 108 T 108
s Alouatta_discolor.k141_743489                               3605 1 -     45847 A
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                24919 1 +     25266 a
i Alouatta_juara.k141_1509701                            I 109 T 109
s Alouatta_macconnelli.k141_918386                             640 1 -      9457 a
i Alouatta_macconnelli.k141_918386                       I 105 T 105
s Alouatta_nigerrima.k141_3472759                            18226 1 -     18578 a
i Alouatta_nigerrima.k141_3472759                        I 113 T 113
s Alouatta_palliata.k141_2135620                              3610 1 +     47717 a
i Alouatta_palliata.k141_2135620                         I 98 T 98
s Alouatta_puruensis.k141_362188                               318 1 +      5663 a
i Alouatta_puruensis.k141_362188                         I 109 T 109
s Alouatta_seniculus.k141_117119                             14829 1 +     50774 A
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  15454 1 -     33861 a
i Aotus_azarae.k141_3104676                              C 0 I 1
s Aotus_griseimembra.k141_2240599                            15474 1 -     34016 a
i Aotus_griseimembra.k141_2240599                        C 0 I 1
s Aotus_nancymaae.KZ198451.1                               4297871 1 -   5030052 A
i Aotus_nancymaae.KZ198451.1                             C 0 I 1
s Aotus_trivirgatus.k141_2152450                             15476 1 -     34685 a
i Aotus_trivirgatus.k141_2152450                         C 0 I 1
s Aotus_vociferans.k141_344750                               28600 1 -     47192 a
i Aotus_vociferans.k141_344750                           C 0 I 1
s Callibella_humilis.k141_1278103                             5209 1 -     10423 a
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             24681 1 +     31915 A
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            5175 1 +      5267 A
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590389 1 - 189096842 a
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             11920 1 -     12001 A
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Carlito_syrichta.NW_007247396.1                           201401 1 +    308752 A
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Cebuella_niveiventris.k141_1251222                          9834 1 -     11392 a
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               5932 1 -      7577 a
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25652393 1 +  26074798 a
i Cebus_albifrons.Contig27                               I 432 T 432
s Cebus_olivaceus.k141_398305                                 1537 1 +      1777 A
i Cebus_olivaceus.k141_398305                            C 0 C 0
s Cebus_unicolor.k141_544048                                 49874 1 -     74725 a
i Cebus_unicolor.k141_544048                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         5406 1 +     31688 a
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4475700 1 +   4669795 a
i Cercocebus_atys.KQ010504.1                             I 88 T 88
s Cercocebus_chrysogaster.k141_393940                        14245 1 -     19203 a
i Cercocebus_chrysogaster.k141_393940                    I 88 T 88
s Cercocebus_lunulatus.k141_3342297                            861 1 -     14043 a
i Cercocebus_lunulatus.k141_3342297                      I 88 T 88
s Cercocebus_torquatus.k141_3057011                           8897 1 +     27781 a
i Cercocebus_torquatus.k141_3057011                      I 88 T 88
s Cercopithecus_ascanius.k141_1024104                         9066 1 -     20310 a
i Cercopithecus_ascanius.k141_1024104                    I 92 T 92
s Cercopithecus_cephus.k141_1078548                          12045 1 +     29689 a
i Cercopithecus_cephus.k141_1078548                      I 92 T 92
s Cercopithecus_diana.k141_1150327                            6799 1 -     20078 a
i Cercopithecus_diana.k141_1150327                       I 92 T 92
s Cercopithecus_hamlyni.k141_187466                          14722 1 -     27936 a
i Cercopithecus_hamlyni.k141_187466                      I 92 T 92
s Cercopithecus_lowei.k141_1854285                            3586 1 -     17152 a
i Cercopithecus_lowei.k141_1854285                       I 92 T 92
s Cercopithecus_albogularis.ctg5                                38817125 1 +  39242232 a
i Cercopithecus_albogularis.ctg5                               I 92 T 92
s Cercopithecus_mona.ctg39                                21222817 1 -  21565898 a
i Cercopithecus_mona.ctg39                               I 92 T 92
s Cercopithecus_neglectus.k141_2526306                       39935 1 -     53127 a
i Cercopithecus_neglectus.k141_2526306                   I 92 T 92
s Cercopithecus_nictitans.k141_1119848                          94 1 +     27489 A
i Cercopithecus_nictitans.k141_1119848                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14735 1 -     27947 a
i Cercopithecus_petaurista.k141_807961                   I 92 T 92
s Cercopithecus_pogonias.k141_822820                         14711 1 +     17596 a
i Cercopithecus_pogonias.k141_822820                     I 92 T 92
s Cercopithecus_roloway.k141_2581234                           758 1 +     14005 a
i Cercopithecus_roloway.k141_2581234                     I 92 T 92
s Chiropotes_albinasus.k141_2813271                          11186 1 +     11226 a
i Chiropotes_albinasus.k141_2813271                      I 100 T 100
s Chlorocebus_aethiops.ctg25                              18428695 1 -  18827391 a
i Chlorocebus_aethiops.ctg25                             I 92 T 92
s Chlorocebus_pygerythrus.k141_1025673                       15132 1 -     50209 a
i Chlorocebus_pygerythrus.k141_1025673                   I 92 T 92
s Chlorocebus_sabaeus.CM001947.1                         135422132 1 + 135778131 a
i Chlorocebus_sabaeus.CM001947.1                         I 92 T 92
s Colobus_angolensis.KN981557.1                            1910641 1 +   2368649 a
i Colobus_angolensis.KN981557.1                          I 96 T 96
s Colobus_polykomos.k141_906115                              37175 1 +     84244 a
i Colobus_polykomos.k141_906115                          I 92 T 92
s Erythrocebus_patas.Contig38                             21205302 1 -  21539334 a
i Erythrocebus_patas.Contig38                            I 92 T 92
s Gorilla_beringei.k141_3596273                              16096 1 -     32273 a
i Gorilla_beringei.k141_3596273                          I 103 T 103
s Gorilla_gorilla.LT578341.1                             186338234 1 + 186649187 a
i Gorilla_gorilla.LT578341.1                             I 95 T 95
s Hoolock_leuconedys.ctg274                                    434805 1 +    630532 A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7471 1 +     64341 A
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           4794 1 +      4941 A
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        7512 1 +     35603 A
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    28973 1 +     38576 A
i Leontopithecus_chrysomelas.k141_1519602                C 0 I 227
s Leontopithecus_rosalia.k141_464620                         25670 1 +     66356 A
i Leontopithecus_rosalia.k141_464620                     C 0 I 6
s Lophocebus_aterrimus.ctg367                              1437243 1 +   1826925 a
i Lophocebus_aterrimus.ctg367                            I 84 T 84
s Macaca_arctoides.k141_2326796                               6969 1 +     40492 A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59676228 1 +  60120075 A
i Macaca_assamensis.Contig5                              C 0 I 6
s Macaca_cyclopis.k119_18836                                 12741 1 -     26193 a
i Macaca_cyclopis.k119_18836                             C 0 I 6
s Macaca_fascicularis.k141_814140                            80525 1 -    114318 a
i Macaca_fascicularis.k141_814140                        C 0 I 6
s Macaca_fuscata.k119_255327                                  6216 1 -     23192 a
i Macaca_fuscata.k119_255327                             C 0 I 6
s Macaca_leonina.k141_3550399                                15685 1 -     29190 a
i Macaca_leonina.k141_3550399                            C 0 I 112
s Macaca_maura.k141_2733130                                  24250 1 +     37952 A
i Macaca_maura.k141_2733130                              C 0 I 6
s Macaca_mulatta.NC_041758.1                             186839339 1 + 187317192 A
i Macaca_mulatta.NC_041758.1                             C 0 I 6
s Macaca_nemestrina.KQ007038.1                            25457902 1 -  25927173 A
i Macaca_nemestrina.KQ007038.1                           C 0 I 6
s Macaca_nigra.k141_1655396                                  80098 1 +     89720 A
i Macaca_nigra.k141_1655396                              C 0 I 6
s Macaca_radiata.k141_3680011                                 7099 1 +     20474 A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   6899 1 -     14993 a
i Macaca_siberu.k141_635500                              C 0 I 6
s Macaca_silenus.Contig273                                  329765 1 -    668171 a
i Macaca_silenus.Contig273                               C 0 I 6
s Macaca_thibetana.k99_256239                                 5215 1 -     24072 A
i Macaca_thibetana.k99_256239                            C 0 I 6
s Macaca_tonkeana.k141_1498238                               25837 1 -     45290 a
i Macaca_tonkeana.k141_1498238                           C 0 I 6
s Mandrillus_leucophaeus.scaffold280                      23937520 1 -  24302211 a
i Mandrillus_leucophaeus.scaffold280                     I 88 T 88
s Mandrillus_sphinx.Contig270                               351644 1 +    752769 a
i Mandrillus_sphinx.Contig270                            I 84 T 84
s Mico_argentatus.k141_1239457                                5749 1 -      7380 a
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               4822 1 +     18990 A
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      5761 1 -      7356 a
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9233 1 -     28506 a
i Miopithecus_ogouensis.k141_534055                      I 76 T 76
s Nasalis_larvatus.k141_413338                               15228 1 +     21681 a
i Nasalis_larvatus.k141_413338                           I 96 T 96
s Pan_paniscus.KQ411613.1                                    44185 1 +     80009 a
i Pan_paniscus.KQ411613.1                                I 99 T 99
s Pan_troglodytes.KZ622849.1                                 22387 1 +    110857 a
i Pan_troglodytes.KZ622849.1                             I 620 T 46
s Papio_anubis.CM001495.2                                183443322 1 + 183742232 a
i Papio_anubis.CM001495.2                                I 140 T 140
s Papio_cynocephalus.k141_4307930                             6968 1 +     20448 a
i Papio_cynocephalus.k141_4307930                        I 88 T 88
s Papio_hamadryas.Contig39                                20563780 1 +  20919399 a
i Papio_hamadryas.Contig39                               I 92 T 92
s Papio_kindae.k141_1936966                                   5712 1 +     41871 a
i Papio_kindae.k141_1936966                              I 88 T 88
s Papio_papio.k141_802527                                     9005 1 +     27711 a
i Papio_papio.k141_802527                                I 96 T 96
s Papio_ursinus.k141_3428135                                  9074 1 +      9205 a
i Papio_ursinus.k141_3428135                             I 84 T 84
s Piliocolobus_badius.k141_1234363                           43723 1 +     62158 a
i Piliocolobus_badius.k141_1234363                       I 80 T 80
s Piliocolobus_gordonorum.k141_381342                        38470 1 +     89929 a
i Piliocolobus_gordonorum.k141_381342                    I 96 T 96
s Piliocolobus_kirkii.k141_448987                            39886 1 +     51399 a
i Piliocolobus_kirkii.k141_448987                        I 96 T 96
s Piliocolobus_tephrosceles.PDMG02000141.1                14296124 1 -  14605196 a
i Piliocolobus_tephrosceles.PDMG02000141.1               I 96 T 96
s Pongo_abelii.CM009266.2                                189131227 1 + 189387572 a
i Pongo_abelii.CM009266.2                                I 99 T 99
s Pongo_pygmaeus.ctg66                                     9570833 1 +   9816681 a
i Pongo_pygmaeus.ctg66                                   I 97 T 97
s Presbytis_comata.k141_677006                               73404 1 -     81375 a
i Presbytis_comata.k141_677006                           I 92 T 92
s Presbytis_mitrata.k141_1087752                              5224 1 +     19060 a
i Presbytis_mitrata.k141_1087752                         I 92 T 92
s Pygathrix_cinerea.k141_1153803                             15237 1 -     91421 a
i Pygathrix_cinerea.k141_1153803                         I 96 T 96
s Pygathrix_nigripes_b.ctg100                                 7609357 1 +   7812017 a
i Pygathrix_nigripes_b.ctg100                               I 96 T 96
s Pygathrix_nigripes_a.k141_215492                             15209 1 -     72585 a
i Pygathrix_nigripes_a.k141_215492                         I 96 T 96
s Rhinopithecus_bieti.k119_217274                             6922 1 -     11128 a
i Rhinopithecus_bieti.k119_217274                        I 95 T 95
s Rhinopithecus_roxellana.NC_044550.1                     91236269 1 - 195417433 a
i Rhinopithecus_roxellana.NC_044550.1                    I 89 T 89
s Rhinopithecus_strykeri.ctg102                            7671927 1 +   7961872 a
i Rhinopithecus_strykeri.ctg102                          I 95 T 95
s Saguinus_bicolor.k141_2619299                               8148 1 -      8359 a
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_imperator.k141_2524406                             2106 1 +      2197 A
i Saguinus_imperator.k141_2524406                        C 0 C 0
s Saguinus_inustus.k141_699149                               13525 1 +     13640 A
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               8394 1 +      8564 A
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469244 1 + 209938924 A
i Saguinus_midas.LG03                                    C 0 I 1
s Saguinus_mystax.k141_374627                                 7950 1 -      9399 a
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119950862 1 - 121099817 A
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23318 1 +     46362 A
i Saimiri_cassiquiarensis.k141_2188234                   C 0 I 1
s Saimiri_macrodon.k141_716185                               23413 1 +     45824 A
i Saimiri_macrodon.k141_716185                           C 0 I 1
s Saimiri_oerstedii.k141_1487881                             40041 1 -     64574 a
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               3047 1 -     23631 a
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 23309 1 -     61129 a
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420632 1 -   5703754 a
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          55673 1 -     80660 a
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Semnopithecus_entellus.k141_11662                          19746 1 -     19888 A
i Semnopithecus_entellus.k141_11662                      I 94 T 94
s Semnopithecus_hypoleucos.k141_1615806                      26951 1 +     39453 a
i Semnopithecus_hypoleucos.k141_1615806                  I 96 T 96
s Semnopithecus_johnii.k141_670120                            7470 1 +     27826 a
i Semnopithecus_johnii.k141_670120                       I 96 T 96
s Semnopithecus_priam.k141_638794                             6991 1 -     19483 a
i Semnopithecus_priam.k141_638794                        I 96 T 96
s Semnopithecus_schistaceus.k141_1572284                       298 1 -     12762 A
i Semnopithecus_schistaceus.k141_1572284                 n 1 I 25
s Semnopithecus_vetulus.k141_910252                            154 1 +     13763 A
i Semnopithecus_vetulus.k141_910252                      n 1 I 30
s Tarsius_lariang.k141_2201908                               26408 1 +     70052 a
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1241 1 -     16117 a
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428640 1 + 186847797 a
i Theropithecus_gelada.CM009954.1                        I 88 T 88
s Trachypithecus_auratus.k141_722599                         11042 1 -     20410 a
i Trachypithecus_auratus.k141_722599                     I 96 T 96
s Trachypithecus_crepusculus.k141_582567                       156 1 -     12674 a
i Trachypithecus_crepusculus.k141_582567                 I 96 T 96
s Trachypithecus_cristatus.k141_580354                       11143 1 +     19930 a
i Trachypithecus_cristatus.k141_580354                   I 96 T 96
s Trachypithecus_francoisi.k141_1412647                       7554 1 -     19997 a
i Trachypithecus_francoisi.k141_1412647                  I 80 T 80
s Trachypithecus_geei.k141_277701                            47693 1 -     60166 a
i Trachypithecus_geei.k141_277701                        I 95 T 95
s Trachypithecus_germaini.k141_912491                        15165 1 -     27529 a
i Trachypithecus_germaini.k141_912491                    I 96 T 96
s Trachypithecus_hatinhensis.k141_143409                     15109 1 -     18194 a
i Trachypithecus_hatinhensis.k141_143409                 I 96 T 96
s Trachypithecus_laotum.k141_907409                           8821 1 -     21137 a
i Trachypithecus_laotum.k141_907409                      I 80 T 80
s Trachypithecus_leucocephalus.k141_587342                    7524 1 -     10723 a
i Trachypithecus_leucocephalus.k141_587342               I 80 T 80
s Trachypithecus_melamera.k141_434728                         6696 1 +      9834 a
i Trachypithecus_melamera.k141_434728                    I 96 T 96
s Trachypithecus_obscurus.k141_190785                        25009 1 +     32220 a
i Trachypithecus_obscurus.k141_190785                    I 96 T 96
s Trachypithecus_phayrei.ctg124                            5939111 1 +   6242583 a
i Trachypithecus_phayrei.ctg124                          I 96 T 96
s Trachypithecus_pileatus.k141_2007326                        8362 1 +     20839 a
i Trachypithecus_pileatus.k141_2007326                   I 95 T 95
e Echinops_telfairi.JH980293.1                            48780377 2 + 111700974 I
e Otolemur_garnettii.GL873799.1                             696350 2 -   1103335 I
e Otolemur_crassicaudatus.k141_222918                         4187 2 +      8798 I
e Galago_senegalensis.k141_631886                             4346 2 +     11339 I
e Galago_moholi.ctg2040                                     426655 2 -    453645 I
e Mus_pahari.LT608297.1                                   31355110 4 -  89631738 I
e Mus_spretus.CM004101.1                                  90752512 4 - 130317789 I
e Mus_musculus.chr8                                       87650451 4 - 129401213 I
e Mus_caroli.LT608237.1                                   84361453 4 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Loris_tardigradus.ctg83                                  1004723 2 +   6120653 I
e Loris_lydekkerianus.k141_2539221                            5903 2 +     11245 I
e Perodicticus_potto.k141_1092580                             8563 2 +     25941 I
e Perodicticus_ibeanus.k141_855320                           10157 2 +     13100 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      14991 2 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5344 2 +     86975 I
e Xerus_inauris.XerIna_scaffold_2302                          1115 2 +    224448 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 10771 2 -     43706 I
e Vicugna_pacos.KN270157.1                                 5371858 2 -   5488506 I
e Varecia_variegata.k141_1128296                             11506 2 +     24756 I
e Varecia_rubra.k141_590885                                  11447 2 +     50397 I
e Ursus_maritimus.KK499267.1                               4850420 2 -   5085361 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   53301 2 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     9305 2 -     10553 I
e Tupaia_chinensis.KB320699.1                              2155654 2 +   4065304 I
e Trichechus_manatus.JH594705.1                            4293232 2 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     81170 2 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   6383 2 +      8208 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              105493 2 +    114563 I
e Tapirus_terrestris.TapTer_scaffold_755                    387189 2 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      118732 2 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 72600 2 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                10779 2 +     41958 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6810477 2 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629              18302 2 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             30715 2 +     97271 I
e Spermophilus_dauricus.KZ294078.1                         1953975 2 -   3870691 I
e Sorex_araneus.JH798187.1                                13651001 2 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               3755 2 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_42075                      411 4 -     30804 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    153195 2 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                87787 2 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570713 4 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20274305 2 -  38429054 I
e Pteropus_vampyrus.KN534172.1                                6819 2 -      8028 I
e Pteropus_alecto.KB030862.1                              22976766 2 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         40214 2 +     42204 I
e Pteronotus_parnellii.KE909381.1                            15049 2 -     21811 I
e Psammomys_obesus.NESX01036370.1                            10483 4 -     21651 I
e Propithecus_verreauxi.k141_956661                           4836 2 -      6182 I
e Propithecus_tattersalli.k141_790011                        28613 2 -     67325 I
e Propithecus_perrieri.k141_1200571                           4788 2 -     24134 I
e Propithecus_edwardsi.k141_1176054                          26601 2 +     35766 I
e Propithecus_diadema.k141_58108                              1123 2 -     13098 I
e Propithecus_coronatus.k141_347390                          29080 2 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     990768 2 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2596787 2 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 13333 2 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             1738 2 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     28179 2 -     29689 I
e Peromyscus_maniculatus.KI615324.1                       18194865 4 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12633 2 -     78924 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4721239 2 -   8748460 I
e Panthera_pardus.KV860321.1                                264360 2 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  151151 2 +    230217 I
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       462326 2 -    559221 I
e Oryctolagus_cuniculus.CM000791.1                        67147358 2 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387               9824 2 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80239 4 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   25239 4 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              506631 2 -   2017862 I
e Octodon_degus.JH651603.1                                  746902 2 +  11899542 I
e Ochotona_princeps.JH802162.1                             1363500 2 +   3988456 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761622 2 + 199412804 I
e Nycticebus_coucang.k141_1127096                              192 2 +      2075 I
e Nycticebus_bengalensis.LG01                            102586268 2 - 196305487 I
e Nyctereutes_procyonoides.CAJHUB010000658.1               9149358 2 -   9404916 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20306946 2 +  31847680 I
e Nannospalax_galili.KL204047.1                            2034163 2 -   3037898 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189239 2 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_482318                         462 2 -       721 I
e Myotis_lucifugus.GL429869.1                              3903788 2 -   4330536 I
e Myotis_davidii.KB100139.1                                1587702 2 -   6019432 I
e Myotis_brandtii.KE162005.1                                280434 2 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     71292 2 -     80779 I
e Mustela_putorius.JH418006.1                               301215 2 -  14710649 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           6791 2 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   35401 2 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 141596 2 -    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Mirza_zaza.k141_952172                                      9072 2 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         5692 2 -      8324 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             34285 1 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1850604 1 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11260571 4 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                15631 2 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    22124 2 -    145209 I
e Microcebus_murinus.CM007674.1                           18291527 2 -  93316391 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182333 4 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 32827 16 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365             10024 2 +     13704 I
e Megaderma_lyra.MegLyr_scaffold_4542                        10315 8 -    207569 I
e Marmota_marmota.CZRN01000018.1                          33103120 2 -  40650429 I
e Manis_pentadactyla.KN006162.1                              50473 2 -    317179 I
e Manis_javanica.JSZB01003497.1                              18484 2 +    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_8222                 90598 2 +     94391 I
e Lycaon_pictus.CM007581.1                                17955096 2 -  59628241 I
e Loxodonta_africana.GL010049.1                            4217306 2 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     6477 2 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3042824 2 +   3914936 I
e Lepilemur_septentrionalis.k141_185316                      26998 2 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          1602 2 +     25010 I
e Lepilemur_dorsalis.k141_577674                             29062 2 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         11001 2 -     23766 I
e Lemur_catta.scaffold_24                                 15524107 2 -  30322482 I
e Lasiurus_borealis.LasBor_scaffold_32767                    14110 2 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276895 2 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Indri_indri.k141_3655594                                   22545 2 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7520924 2 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      83161 2 +    135385 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  44996 2 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                 878 2 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20662270 2 +  22651954 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               242302 2 +    327341 I
e Hapalemur_occidentalis.k141_907772                         13592 2 -     16460 I
e Hapalemur_meridionalis.k141_248335                         13755 2 -     41752 I
e Hapalemur_griseus.k141_1511508                             13654 2 +     18253 I
e Hapalemur_gilberti.k141_488810                             12015 2 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           6866 2 -     19426 I
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Galeopterus_variegatus.GalVar_scaffold_108840               1205 2 -      9135 I
e Galagoides_demidoff.k141_1711393                            1659 2 +     41679 I
e Fukomys_damarensis.KN121974.1                             850482 2 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  9536 2 -     36744 I
e Felis_catus_fca126.CM031415.1                           20195792 2 + 205367284 I
e Eulemur_sanfordi.k141_1122526                              13802 2 +    111500 I
e Eulemur_rufus.k141_1476633                                  4229 2 -     17153 I
e Eulemur_rubriventer.k141_774594                              176 2 +     13026 I
e Eulemur_mongoz.k141_232305                                 10685 2 +     97555 I
e Eulemur_macaco.k141_1562045                                12755 2 +     75513 I
e Eulemur_fulvus.k141_544389                                 13993 2 +     23973 I
e Eulemur_flavifrons.k141_1184614                            12758 2 +     26330 I
e Eulemur_coronatus.k141_885031                              15554 2 -     25546 I
e Eulemur_collaris.k141_377015                                6530 2 -     16928 I
e Eulemur_albifrons.k141_342033                              13827 2 -     14127 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3328221 2 -   7059049 I
e Equus_przewalskii.KK951119.1                               33372 2 +    498745 I
e Equus_caballus.CM000403.2                               18531344 2 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1283523 2 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2145694 2 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16329287 2 -  41312741 I
e Ellobius_talpinus.LOJH01081419.1                             523 4 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          20392 4 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1097698 2 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Eidolon_helvum.KE759718.1                                  10507 2 +     11740 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    36448 2 +     67921 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    6016 2 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  673264 2 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8630104 2 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Daubentonia_madagascariensis.ctg71                      12537322 2 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            63517 2 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35813 2 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    837136 2 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             28469 2 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_37019               2943 2 -     19598 I
e Cricetulus_griseus.LT883664.1                           11667658 4 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 50291 2 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          14380 2 -     20389 I
e Condylura_cristata.JH655891.1                           17548078 2 -  53390261 I
e Colobus_guereza.LG01                                   199948958 0 + 200372422 C
e Choloepus_hoffmanni.KN194906.1                            173364 2 +    839153 I
e Choloepus_didactylus.ChoDid_scaffold_45914                 18288 2 +     19366 I
e Chinchilla_lanigera.JH722012.1                           1252855 2 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           16468 2 +     57038 I
e Cheirogaleus_major.k141_333249                             21103 2 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870             510 2 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2440 2 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     92985 2 +    217609 I
e Castor_canadensis.CasCan_scaffold_2074                    137136 2 +    179628 I
e Carollia_perspicillata.CarPer_scaffold_92756                5091 2 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                    1106 2 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18500368 2 +  63665305 I
e Canis_lupus_familiaris.chr16                            17958856 2 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9034591 2 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    185205 2 -    185531 I
e CanFam4.chr16                                           17799148 2 -  60362399 I
e Camelus_ferus.KB017975.1                                  403096 2 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2334813 2 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10002355 2 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              54351 2 +     85213 I
e Avahi_laniger.k141_765380                                  53724 2 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  4733 2 +     43469 I
e Arctocebus_calabarensis.k141_2318572                       11521 2 +     14667 I
e Aplodontia_rufa.AprRuf_scaffold_68852                      12658 7 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      185324 2 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74594 2 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             79329 2 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9510559 2 -  29979442 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     70877 18 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           827298 2 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       6739 12 +     62944 GA---G----------------------------TTG---AAT---g--t------------------------------a
s Acinonyx_jubatus.LLWD01001279.1                           827300 12 -   1699592 GA---A----------------------------TGG---AAT---G--C------------------------------A
i Acinonyx_jubatus.LLWD01001279.1                        I 2 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510561 12 -  29979442 CA---G----------------------------TGG---AAT---G--C------------------------------A
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 2 C 0
s Ailurus_fulgens.LNAC01001112.1                             79331 12 -    347723 GA---G----------------------------TGG---AAT---G--G------------------------------A
i Ailurus_fulgens.LNAC01001112.1                         I 2 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     74596  1 -     89534 G--------------------------------------------------------------------------------
i Allactaga_bullata.AllBul_scaffold_9566                 I 2 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14668 12 -     52922 ga---g----------------------------tag---aat---g--t------------------------------a
i Allenopithecus_nigroviridis.k141_3361533               T 112 C 0
s Allochrocebus_lhoesti.k141_4309873                         14604 12 -     28001 ga---g----------------------------tag---aat---g--t------------------------------a
i Allochrocebus_lhoesti.k141_4309873                     T 92 C 0
s Allochrocebus_preussi.k141_1442296                          5100 12 -     18505 ga---g----------------------------tag---aat---g--t------------------------------a
i Allochrocebus_preussi.k141_1442296                     T 92 C 0
s Allochrocebus_solatus.k141_166128                           5954 12 -     12518 ga---g----------------------------tag---aat---g--t------------------------------a
i Allochrocebus_solatus.k141_166128                      T 92 C 0
s Alouatta_belzebul.k141_3560514                              7420 12 +     51355 GA---G----------------------------TAG---AAA---G--T------------------------------A
i Alouatta_belzebul.k141_3560514                         T 112 C 0
s Alouatta_caraya.k141_1701091                                 542 12 -     36483 ga---g----------------------------tag---aaa---g--t------------------------------a
i Alouatta_caraya.k141_1701091                           T 108 C 0
s Alouatta_discolor.k141_743489                               3606 12 -     45847 GA---G----------------------------TAG---AAA---G--T------------------------------A
i Alouatta_discolor.k141_743489                          C 0 C 0
s Alouatta_juara.k141_1509701                                24811 12 +     25266 GA---G----------------------------TAG---AAA---G--T------------------------------A
i Alouatta_juara.k141_1509701                            T 109 C 0
s Alouatta_macconnelli.k141_918386                             536 12 -      9457 ga---g----------------------------tag---aaa---g--t------------------------------a
i Alouatta_macconnelli.k141_918386                       T 105 C 0
s Alouatta_nigerrima.k141_3472759                            18114 12 -     18578 ga---g----------------------------tag---aaa---g--t------------------------------a
i Alouatta_nigerrima.k141_3472759                        T 113 C 0
s Alouatta_palliata.k141_2135620                              3513 12 +     47717 GA---G----------------------------TAG---AAA---G--T------------------------------A
i Alouatta_palliata.k141_2135620                         T 98 C 0
s Alouatta_puruensis.k141_362188                               210 12 +      5663 GA---G----------------------------TAG---AAA---G--T------------------------------A
i Alouatta_puruensis.k141_362188                         T 109 C 0
s Alouatta_seniculus.k141_117119                             14830 42 +     50774 GA---G----------------------------TAG---AAA---G--TATTGTAAAGAAGAAAGAGAAAAAAGAAGGGA
i Alouatta_seniculus.k141_117119                         C 0 T 30
s Anoura_caudifer.AnoCau_scaffold_1412                      185326 12 +    412891 GA---G----------------------------AAT---AAT---A--T------------------------------A
i Anoura_caudifer.AnoCau_scaffold_1412                   I 2 C 0
s Aotus_azarae.k141_3104676                                  15456 11 -     33861 -a---g----------------------------tag---aat---g--t------------------------------a
i Aotus_azarae.k141_3104676                              I 1 C 0
s Aotus_griseimembra.k141_2240599                            15476 11 -     34016 -a---g----------------------------tag---aat---g--t------------------------------a
i Aotus_griseimembra.k141_2240599                        I 1 C 0
s Aotus_nancymaae.KZ198451.1                               4297873 11 -   5030052 -A---G----------------------------TAG---AAT---G--T------------------------------A
i Aotus_nancymaae.KZ198451.1                             I 1 C 0
s Aotus_trivirgatus.k141_2152450                             15478 11 -     34685 -a---g----------------------------tag---aat---g--t------------------------------a
i Aotus_trivirgatus.k141_2152450                         I 1 C 0
s Aotus_vociferans.k141_344750                               28602 11 -     47192 -a---g----------------------------tag---aat---g--t------------------------------a
i Aotus_vociferans.k141_344750                           I 1 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      12665  6 +     20879 ----------------------------------------AAT---G--T------------------------------A
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 7 C 0
s Arctocebus_calabarensis.k141_2318572                       11523 12 +     14667 GA---G----------------------------CAG---AAT---G--T------------------------------A
i Arctocebus_calabarensis.k141_2318572                   I 2 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4735 12 +     43469 GA---A----------------------------AAT---AAT---G--T------------------------------A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 2 C 0
s Avahi_laniger.k141_765380                                  53726 12 -     92717 GA---G----------------------------TAG---AAT---A--T------------------------------A
i Avahi_laniger.k141_765380                              I 2 C 0
s Avahi_peyrierasi.k141_1424874                              54353 12 +     85213 GA---G----------------------------TAG---AAT---A--T------------------------------A
i Avahi_peyrierasi.k141_1424874                          I 2 C 0
s Callibella_humilis.k141_1278103                             5210 12 -     10423 ga---g----------------------------tag---aat---g--t------------------------------a
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             24682 12 +     31915 GA---G----------------------------TAG---AAT---G--T------------------------------A
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            5176 12 +      5267 GA---G----------------------------TAG---AAT---G--T------------------------------A
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590390 12 - 189096842 ga---g----------------------------tag---aat---g--t------------------------------a
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             11921 12 -     12001 GA---G----------------------------TAG---AAT---G--T------------------------------A
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002357 12 -  17673402 GA---G----------------------------TAG---AAT---A--T------------------------------A
i Camelus_bactrianus.KN276810.1                          I 2 C 0
s Camelus_dromedarius.KN272107.1                           2334815 12 -   7040546 GA---G----------------------------TAG---AAT---A--T------------------------------A
i Camelus_dromedarius.KN272107.1                         I 2 C 0
s Camelus_ferus.KB017975.1                                  403098 12 -   1652518 GA---G----------------------------TAG---AAT---A--T------------------------------A
i Camelus_ferus.KB017975.1                               I 2 C 0
s CanFam4.chr16                                           17799150 12 -  60362399 GA---G----------------------------TGG---AAT---G--C------------------------------A
i CanFam4.chr16                                          I 2 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    185207 12 -    185531 GA---G----------------------------TGG---AAT---G--C------------------------------A
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 2 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034593 12 -   9314153 GA---G----------------------------TGG---AAT---G--C------------------------------A
i Canis_lupus_dingo.QKWQ01000480.1                       I 2 C 0
s Canis_lupus_familiaris.chr16                            17958858 12 -  59632846 GA---G----------------------------TGG---AAT---G--C------------------------------A
i Canis_lupus_familiaris.chr16                           I 2 C 0
s Canis_lupus_orion.HG994398.1                            18500370 12 +  63665305 GA---G----------------------------TGG---AAT---G--C------------------------------A
i Canis_lupus_orion.HG994398.1                           I 2 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1108 12 -     12242 GA---G----------------------------TAC---AAT---G--T------------------------------A
i Capromys_pilorides.CapPil_scaffold_65020               I 2 C 0
s Carlito_syrichta.NW_007247396.1                           201402 12 +    308752 Ga---g----------------------------tag---aaa---g--g------------------------------a
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5093 12 -     11696 GA---A----------------------------AAT---AAC---G--T------------------------------A
i Carollia_perspicillata.CarPer_scaffold_92756           I 2 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137138  6 +    179628 ----------------------------------------AAT---G--T------------------------------A
i Castor_canadensis.CasCan_scaffold_2074                 I 2 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     92987 12 +    217609 GA---G----------------------------TAG---AAT---A--T------------------------------A
i Catagonus_wagneri.CatWag_scaffold_2839                 I 2 C 0
s Cebuella_niveiventris.k141_1251222                          9835 12 -     11392 ga---g----------------------------tag---aat---g--t------------------------------a
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               5933 12 -      7577 ga---g----------------------------tag---aat---g--t------------------------------a
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25651962 12 +  26074798 ga---g----------------------------tag---aat---g--t------------------------------a
i Cebus_albifrons.Contig27                               T 432 C 0
s Cebus_olivaceus.k141_398305                                 1538 12 +      1777 GA---G----------------------------TAG---AAT---G--T------------------------------A
i Cebus_olivaceus.k141_398305                            C 0 C 0
s Cebus_unicolor.k141_544048                                 49875 12 -     74725 ga---g----------------------------tag---aat---g--t------------------------------a
i Cebus_unicolor.k141_544048                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         5407 12 +     31688 ga---g----------------------------tag---aat---g--g------------------------------a
i Cephalopachus_bancanus.k141_1423433                    C 0 I 114
s Ceratotherium_simum.JH767749.1                          12231415 12 +  27778364 GA---G----------------------------TAG---AAC---A--T------------------------------A
i Ceratotherium_simum.JH767749.1                         I 2 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2442 12 -     25243 GA---G----------------------------TAG---AAC---A--T------------------------------A
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 2 C 0
s Cercocebus_atys.KQ010504.1                               4475613 12 +   4669795 GA---G----------------------------TAG---ACT---G--T------------------------------a
i Cercocebus_atys.KQ010504.1                             T 88 C 0
s Cercocebus_chrysogaster.k141_393940                        14158 12 -     19203 ga---g----------------------------tag---act---g--t------------------------------a
i Cercocebus_chrysogaster.k141_393940                    T 88 C 0
s Cercocebus_lunulatus.k141_3342297                            774 12 -     14043 ga---g----------------------------tag---act---g--t------------------------------a
i Cercocebus_lunulatus.k141_3342297                      T 88 C 0
s Cercocebus_torquatus.k141_3057011                           8810 12 +     27781 GA---G----------------------------TAG---ACT---G--T------------------------------A
i Cercocebus_torquatus.k141_3057011                      T 88 C 0
s Cercopithecus_ascanius.k141_1024104                         8975 12 -     20310 ga---g----------------------------tag---aat---g--t------------------------------a
i Cercopithecus_ascanius.k141_1024104                    T 92 C 0
s Cercopithecus_cephus.k141_1078548                          11954 12 +     29689 GA---G----------------------------TAG---AAT---G--T------------------------------A
i Cercopithecus_cephus.k141_1078548                      T 92 C 0
s Cercopithecus_diana.k141_1150327                            6708 12 -     20078 ga---g----------------------------tag---aat---g--t------------------------------a
i Cercopithecus_diana.k141_1150327                       T 92 C 0
s Cercopithecus_hamlyni.k141_187466                          14631 12 -     27936 ga---g----------------------------tag---aat---g--t------------------------------a
i Cercopithecus_hamlyni.k141_187466                      T 92 C 0
s Cercopithecus_lowei.k141_1854285                            3495 12 -     17152 ga---g----------------------------tag---aat---g--t------------------------------a
i Cercopithecus_lowei.k141_1854285                       T 92 C 0
s Cercopithecus_albogularis.ctg5                                38817034 12 +  39242232 GA---G----------------------------TAG---AAT---G--T------------------------------A
i Cercopithecus_albogularis.ctg5                               T 92 C 0
s Cercopithecus_mona.ctg39                                21222726 12 -  21565898 ga---g----------------------------tag---aat---g--t------------------------------a
i Cercopithecus_mona.ctg39                               T 92 C 0
s Cercopithecus_neglectus.k141_2526306                       39844 12 -     53127 ga---g----------------------------tag---aat---g--t------------------------------a
i Cercopithecus_neglectus.k141_2526306                   T 92 C 0
s Cercopithecus_nictitans.k141_1119848                          95 12 +     27489 GA---G----------------------------TAG---AAT---G--T------------------------------A
i Cercopithecus_nictitans.k141_1119848                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14644 12 -     27947 ga---g----------------------------tag---aat---g--t------------------------------a
i Cercopithecus_petaurista.k141_807961                   T 92 C 0
s Cercopithecus_pogonias.k141_822820                         14620 12 +     17596 GA---G----------------------------TAG---AAT---G--T------------------------------A
i Cercopithecus_pogonias.k141_822820                     T 92 C 0
s Cercopithecus_roloway.k141_2581234                           667 12 +     14005 GA---G----------------------------TAG---ACT---G--T------------------------------A
i Cercopithecus_roloway.k141_2581234                     T 92 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             512 12 -      8501 GA---G----------------------------TAG---AAA---G--T------------------------------A
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       I 2 C 0
s Cheirogaleus_major.k141_333249                             21105 12 -     52598 GA---G----------------------------TAG---AAT---A--T------------------------------A
i Cheirogaleus_major.k141_333249                         I 2 C 0
s Cheirogaleus_medius.k141_1055463                           16470 12 +     57038 GA---G----------------------------TAG---AAT---A--T------------------------------A
i Cheirogaleus_medius.k141_1055463                       I 2 C 0
s Chinchilla_lanigera.JH722012.1                           1252857 12 +   2543920 GA---G----------------------------TAC---AAT---G--T------------------------------A
i Chinchilla_lanigera.JH722012.1                         I 2 C 0
s Chiropotes_albinasus.k141_2813271                          11087 12 +     11226 GA---C----------------------------TAG---AAT---G--T------------------------------A
i Chiropotes_albinasus.k141_2813271                      T 100 C 0
s Chlorocebus_aethiops.ctg25                              18428604 12 -  18827391 ga---g----------------------------tag---aat---g--t------------------------------a
i Chlorocebus_aethiops.ctg25                             T 92 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15041 12 -     50209 ga---g----------------------------tag---aat---g--t------------------------------a
i Chlorocebus_pygerythrus.k141_1025673                   T 92 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422041 12 + 135778131 GA---G----------------------------TAG---AAT---G--T------------------------------A
i Chlorocebus_sabaeus.CM001947.1                         T 92 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 18290 12 +     19366 GA---G----------------------------TAG---AAT---G--C------------------------------T
i Choloepus_didactylus.ChoDid_scaffold_45914             I 2 C 0
s Choloepus_hoffmanni.KN194906.1                            173366 12 +    839153 GA---G----------------------------TAG---AAT---G--C------------------------------A
i Choloepus_hoffmanni.KN194906.1                         I 2 C 0
s Colobus_angolensis.KN981557.1                            1910546  9 +   2368649 GA---G----------------------------TAG---AAT--------------------------------------
i Colobus_angolensis.KN981557.1                          T 96 I 3
s Colobus_polykomos.k141_906115                              37084  9 +     84244 GA---G----------------------------TAG---AAT--------------------------------------
i Colobus_polykomos.k141_906115                          T 92 I 3
s Condylura_cristata.JH655891.1                           17548080 14 -  53390261 GT---G----------------------------TAG---AAT---GAGT------------------------------A
i Condylura_cristata.JH655891.1                          I 2 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14382  6 -     20389 GA---G----------------------------TAG--------------------------------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 2 I 6
s Crocidura_indochinensis.CroInd_scaffold_37019               2945 40 -     19598 GG---ATGTAATATATGTTGGAGTAATTGGTTCTCAC---AAT---A--T------------------------------A
i Crocidura_indochinensis.CroInd_scaffold_37019          I 2 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28471 12 -     87169 GA---G----------------------------TGG---AAT---G--C------------------------------A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 2 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837138 12 +   1526836 GA---G----------------------------TAA---AAT---G--G------------------------------C
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 2 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35815 12 +     51376 GG---G----------------------------TAC---AAT---G--T------------------------------A
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 2 C 0
s Dasypus_novemcinctus.JH564415.1                            63519 12 +   2246927 GA---G----------------------------TAG---AAA---T--T------------------------------A
i Dasypus_novemcinctus.JH564415.1                        I 2 C 0
s Daubentonia_madagascariensis.ctg71                      12537324 12 -  12879189 GA---G----------------------------TAG---AAT---G--T------------------------------A
i Daubentonia_madagascariensis.ctg71                     I 2 C 0
s Desmodus_rotundus.KZ672289.1                             8630106 12 +  20541912 GA---G----------------------------TAG---AAT---A--T------------------------------A
i Desmodus_rotundus.KZ672289.1                           I 2 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673266 12 +   1390856 GA---G----------------------------TGG---AAC---G--T------------------------------A
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 2 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6018 12 +    198055 GA---G----------------------------TAG---AAC---G--T------------------------------A
i Diceros_bicornis.DicBicMic_scaffold_5955               I 2 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36450 12 +     67921 GA---G----------------------------TAC---AAT---G--C------------------------------A
i Dinomys_branickii.DinBra_scaffold_21862                I 2 C 0
s Echinops_telfairi.JH980293.1                            48780379 12 + 111700974 GA---G----------------------------TGA---AAT---G--T------------------------------A
i Echinops_telfairi.JH980293.1                           I 2 C 0
s Eidolon_helvum.KE759718.1                                  10509  6 +     11740 AC---A----------------------------TAG--------------------------------------------
i Eidolon_helvum.KE759718.1                              I 2 I 4
s Elephantulus_edwardii.JH947257.1                         1097700 11 +  10337057 -G---G----------------------------AGG---AAT---G--T------------------------------A
i Elephantulus_edwardii.JH947257.1                       I 2 C 0
s Enhydra_lutris.KZ291758.1                               16329289 12 -  41312741 AA---G----------------------------TGG---AAT---G--C------------------------------A
i Enhydra_lutris.KZ291758.1                              I 2 C 0
s Eptesicus_fuscus.JH977646.1                              2145696 14 -  14770903 GA---G----------------------------CAG---CAT-ATA--G------------------------------A
i Eptesicus_fuscus.JH977646.1                            I 2 C 0
s Equus_asinus.JREZ01000139.1                              1283525 11 +   4378816 -A---G----------------------------TAA---AAG---A--G------------------------------G
i Equus_asinus.JREZ01000139.1                            I 2 C 0
s Equus_caballus.CM000403.2                               18531346 11 -  39960074 -A---G----------------------------TAA---AAG---A--G------------------------------G
i Equus_caballus.CM000403.2                              I 2 C 0
s Equus_przewalskii.KK951119.1                               33374 11 +    498745 -A---G----------------------------TAA---AAG---A--G------------------------------G
i Equus_przewalskii.KK951119.1                           I 2 C 0
s Erinaceus_europaeus.JH835339.1                           3328223 11 -   7059049 TA---G----------------------------TAA---AGT---A--T-------------------------------
i Erinaceus_europaeus.JH835339.1                         I 2 C 0
s Erythrocebus_patas.Contig38                             21205211 12 -  21539334 ga---g----------------------------tag---aat---g--t------------------------------a
i Erythrocebus_patas.Contig38                            T 92 C 0
s Eulemur_albifrons.k141_342033                              13829 12 -     14127 GC---A----------------------------TAG---AAT---A--T------------------------------A
i Eulemur_albifrons.k141_342033                          I 2 C 0
s Eulemur_collaris.k141_377015                                6532 12 -     16928 GC---A----------------------------TAG---AAT---A--T------------------------------A
i Eulemur_collaris.k141_377015                           I 2 C 0
s Eulemur_coronatus.k141_885031                              15556 12 -     25546 GC---A----------------------------TAG---AAT---A--T------------------------------A
i Eulemur_coronatus.k141_885031                          I 2 C 0
s Eulemur_flavifrons.k141_1184614                            12760 12 +     26330 GC---G----------------------------TAG---AAT---A--T------------------------------A
i Eulemur_flavifrons.k141_1184614                        I 2 C 0
s Eulemur_fulvus.k141_544389                                 13995 12 +     23973 GC---A----------------------------TAG---AAT---A--T------------------------------A
i Eulemur_fulvus.k141_544389                             I 2 C 0
s Eulemur_macaco.k141_1562045                                12757 12 +     75513 GC---G----------------------------TAG---AAT---A--T------------------------------A
i Eulemur_macaco.k141_1562045                            I 2 C 0
s Eulemur_mongoz.k141_232305                                 10687 12 +     97555 GC---A----------------------------TAG---AAT---A--T------------------------------A
i Eulemur_mongoz.k141_232305                             I 2 C 0
s Eulemur_rubriventer.k141_774594                              178 12 +     13026 GC---A----------------------------TAG---AAT---A--T------------------------------A
i Eulemur_rubriventer.k141_774594                        I 2 C 0
s Eulemur_rufus.k141_1476633                                  4231 12 -     17153 GC---A----------------------------TAG---AAT---A--T------------------------------A
i Eulemur_rufus.k141_1476633                             I 2 C 0
s Eulemur_sanfordi.k141_1122526                              13804 12 +    111500 GC---A----------------------------TAG---AAT---A--T------------------------------A
i Eulemur_sanfordi.k141_1122526                          I 2 C 0
s Felis_catus.CM001381.2                                  20236951 12 + 206538554 GA---A----------------------------TGG---AAT---G--C------------------------------A
i Felis_catus.CM001381.2                                 I 2 I 10
s Felis_catus_fca126.CM031415.1                           20195794 12 + 205367284 GA---A----------------------------TGG---AAT---G--C------------------------------A
i Felis_catus_fca126.CM031415.1                          I 2 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  9538 12 -     36744 GA---A----------------------------TGG---AAT---G--C------------------------------A
i Felis_nigripes.FelNig_flattened_line_20823             I 2 C 0
s Fukomys_damarensis.KN121974.1                             850484 12 +   3816255 GA---G----------------------------TAT---AAT---A--T------------------------------a
i Fukomys_damarensis.KN121974.1                          I 2 C 0
s Galago_moholi.ctg2040                                     426657 12 -    453645 GA---G----------------------------TAA---AAT---G--T------------------------------A
i Galago_moholi.ctg2040                                  I 2 C 0
s Galago_senegalensis.k141_631886                             4348 12 +     11339 GA---G----------------------------TAA---AAT---G--T------------------------------A
i Galago_senegalensis.k141_631886                        I 2 C 0
s Galagoides_demidoff.k141_1711393                            1661 12 +     41679 GA---G----------------------------TAA---AAT---G--T------------------------------A
i Galagoides_demidoff.k141_1711393                       I 2 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1207 12 -      9135 GA---G----------------------------TAG---AAT---G--C------------------------------A
i Galeopterus_variegatus.GalVar_scaffold_108840          I 2 C 0
s Gorilla_beringei.k141_3596273                              15994 12 -     32273 GA---G----------------------------TTG---AAT---G--T------------------------------A
i Gorilla_beringei.k141_3596273                          T 103 C 0
s Gorilla_gorilla.LT578341.1                             186338140 12 + 186649187 GA---G----------------------------TTG---AAT---G--T------------------------------A
i Gorilla_gorilla.LT578341.1                             T 95 C 0
s Hapalemur_alaotrensis.k141_170648                           6868 12 -     19426 GC---G----------------------------TAG---AAT---G--T------------------------------A
i Hapalemur_alaotrensis.k141_170648                      I 2 C 0
s Hapalemur_gilberti.k141_488810                             12017 12 -     15286 GC---G----------------------------TAG---AAT---A--T------------------------------A
i Hapalemur_gilberti.k141_488810                         I 2 C 0
s Hapalemur_griseus.k141_1511508                             13656 12 +     18253 GC---A----------------------------TAG---AAT---A--T------------------------------A
i Hapalemur_griseus.k141_1511508                         I 2 C 0
s Hapalemur_meridionalis.k141_248335                         13757 12 -     41752 GC---G----------------------------TAG---AAT---A--T------------------------------A
i Hapalemur_meridionalis.k141_248335                     I 2 C 0
s Hapalemur_occidentalis.k141_907772                         13594 12 -     16460 GC---G----------------------------TAG---AAT---A--T------------------------------A
i Hapalemur_occidentalis.k141_907772                     I 2 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242304 12 +    327341 GA---G----------------------------TGG---AAT---G--C------------------------------A
i Helogale_parvula.HelPar_flattened_line_2585            I 2 C 0
s Heterocephalus_glaber.JH602082.1                        20662272 12 +  22651954 GA---G----------------------------TAG---AAT---A--C------------------------------A
i Heterocephalus_glaber.JH602082.1                       I 2 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                 880 12 +      7595 GA---G----------------------------CAG---AAT---G--T------------------------------A
i Heterohyrax_brucei.HetBruBak_scaffold_122365           I 2 C 0
s Hoolock_leuconedys.ctg274                                    434806  9 +    630532 CA---G----------------------------TAG---AAT--------------------------------------
i Hoolock_leuconedys.ctg274                                 C 0 I 3
s Hyaena_hyaena.HyaHya_flattened_line_26932                  44998 12 +     55795 GA---G----------------------------TGG---AAT---G--C------------------------------A
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 2 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83163 10 +    135385 GA---G----------------------------TAG---AAT---G----------------------------------
i Hystrix_cristata.HysCri_scaffold_5660                  I 2 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7520926 12 -   7955117 GA---G----------------------------TAG---AAT---G--C------------------------------A
i Ictidomys_tridecemlineatus.JH393364.1                  I 2 C 0
s Indri_indri.k141_3655594                                   22547 12 +     31101 GA---G----------------------------CAG---AAT---A--T------------------------------A
i Indri_indri.k141_3655594                               I 2 C 0
s Jaculus_jaculus.JH725527.1                               8276897  1 -   9596543 A--------------------------------------------------------------------------------
i Jaculus_jaculus.JH725527.1                             I 2 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    14112 14 -     42476 GA---G----------------------------TAG---CAT-ATA--G------------------------------A
i Lasiurus_borealis.LasBor_scaffold_32767                I 2 C 0
s Lemur_catta.scaffold_24                                 15524109 12 -  30322482 GC---G----------------------------TAG---AAT---A--T------------------------------A
i Lemur_catta.scaffold_24                                I 2 C 0
s Leontocebus_fuscicollis.k141_1820339                        7472 12 +     64341 GA---G----------------------------TAG---AAT---G--T------------------------------A
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           4795 12 +      4941 GA---G----------------------------TAG---AAT---G--T------------------------------A
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        7513 12 +     35603 GA---G----------------------------TAG---AAT---G--T------------------------------A
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    29201  6 +     38576 -------------------------------------aagaag---g--g------------------------------a
i Leontopithecus_chrysomelas.k141_1519602                I 227 T 221
s Leontopithecus_rosalia.k141_464620                         25677  6 +     66356 ----------------------------------------AAT---G--T------------------------------A
i Leontopithecus_rosalia.k141_464620                     I 6 C 0
s Lepilemur_ankaranensis.k141_596936                         11003 12 -     23766 GA---G----------------------------TAG---AAA---A--T------------------------------G
i Lepilemur_ankaranensis.k141_596936                     I 2 C 0
s Lepilemur_dorsalis.k141_577674                             29064 12 +     45836 GA---G----------------------------TAG---AAA---A--T------------------------------G
i Lepilemur_dorsalis.k141_577674                         I 2 C 0
s Lepilemur_ruficaudatus.k141_121139                          1604 12 +     25010 GA---G----------------------------TAG---AAA---A--T------------------------------G
i Lepilemur_ruficaudatus.k141_121139                     I 2 C 0
s Lepilemur_septentrionalis.k141_185316                      27000 12 +     54090 GA---G----------------------------TAG---AAA---A--T------------------------------G
i Lepilemur_septentrionalis.k141_185316                  I 2 C 0
s Leptonychotes_weddellii.KB714746.1                       3042826 12 +   3914936 GA---G----------------------------TGG---AAT---G--C------------------------------A
i Leptonychotes_weddellii.KB714746.1                     I 2 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6479 12 -     14121 GA---G----------------------------TAG---ACT---G--A------------------------------G
i Lepus_americanus.LepAme_scaffold_107385                I 2 C 0
s Lophocebus_aterrimus.ctg367                              1437160 12 +   1826925 GA---G----------------------------TAG---ACT---G--T------------------------------A
i Lophocebus_aterrimus.ctg367                            T 84 C 0
s Loris_lydekkerianus.k141_2539221                            5905 12 +     11245 TA---G----------------------------TAG---AAT---G--T------------------------------A
i Loris_lydekkerianus.k141_2539221                       I 2 C 0
s Loris_tardigradus.ctg83                                  1004725 12 +   6120653 TA---G----------------------------TAG---AAT---G--T------------------------------A
i Loris_tardigradus.ctg83                                I 2 C 0
s Loxodonta_africana.GL010049.1                            4217308 12 -  43346337 GA---A----------------------------TAG---AAT---G--G------------------------------A
i Loxodonta_africana.GL010049.1                          I 2 C 0
s Lycaon_pictus.CM007581.1                                17955098 12 -  59628241 GA---G----------------------------TGG---AAT---G--C------------------------------A
i Lycaon_pictus.CM007581.1                               I 2 C 0
s Macaca_arctoides.k141_2326796                               6970  9 +     40492 GA---G----------------------------TAT---AAT--------------------------------------
i Macaca_arctoides.k141_2326796                          C 0 I 3
s Macaca_assamensis.Contig5                               59676235  6 +  60120075 ----------------------------------------AAT---G--T------------------------------A
i Macaca_assamensis.Contig5                              I 6 C 0
s Macaca_cyclopis.k119_18836                                 12748  6 -     26193 ----------------------------------------aat---g--t------------------------------a
i Macaca_cyclopis.k119_18836                             I 6 C 0
s Macaca_fascicularis.k141_814140                            80532  6 -    114318 ----------------------------------------aat---g--t------------------------------a
i Macaca_fascicularis.k141_814140                        I 6 C 0
s Macaca_fuscata.k119_255327                                  6223  6 -     23192 ----------------------------------------aat---g--t------------------------------a
i Macaca_fuscata.k119_255327                             I 6 C 0
s Macaca_leonina.k141_3550399                                15798  8 -     29190 -----------------------------------------agaagg--g------------------------------a
i Macaca_leonina.k141_3550399                            I 112 T 108
s Macaca_maura.k141_2733130                                  24257  6 +     37952 ----------------------------------------AAT---G--T------------------------------A
i Macaca_maura.k141_2733130                              I 6 C 0
s Macaca_mulatta.NC_041758.1                             186839346  6 + 187317192 ----------------------------------------AAt---g--t------------------------------a
i Macaca_mulatta.NC_041758.1                             I 6 C 0
s Macaca_nemestrina.KQ007038.1                            25457909  6 -  25927173 ----------------------------------------AAt---g--t------------------------------a
i Macaca_nemestrina.KQ007038.1                           I 6 C 0
s Macaca_nigra.k141_1655396                                  80105  6 +     89720 ----------------------------------------AAT---G--T------------------------------A
i Macaca_nigra.k141_1655396                              I 6 C 0
s Macaca_radiata.k141_3680011                                 7100 12 +     20474 GA---G----------------------------TAT---AAT---G--T------------------------------A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   6906  6 -     14993 ----------------------------------------aat---g--t------------------------------a
i Macaca_siberu.k141_635500                              I 6 C 0
s Macaca_silenus.Contig273                                  329772  6 -    668171 ----------------------------------------aat---g--t------------------------------a
i Macaca_silenus.Contig273                               I 6 C 0
s Macaca_thibetana.k99_256239                                 5222  6 -     24072 ----------------------------------------aat---g--t------------------------------a
i Macaca_thibetana.k99_256239                            I 6 C 0
s Macaca_tonkeana.k141_1498238                               25844  6 -     45290 ----------------------------------------aat---g--t------------------------------a
i Macaca_tonkeana.k141_1498238                           I 6 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90600  6 +     94391 GC---A----------------------------TAG--------------------------------------------
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 2 I 4
s Mandrillus_leucophaeus.scaffold280                      23937433 12 -  24302211 ga---g----------------------------tag---act---g--t------------------------------a
i Mandrillus_leucophaeus.scaffold280                     T 88 C 0
s Mandrillus_sphinx.Contig270                               351561 12 +    752769 GA---G----------------------------TAG---ACT---G--T------------------------------A
i Mandrillus_sphinx.Contig270                            T 84 C 0
s Manis_javanica.JSZB01003497.1                              18486  2 +    737560 GA-------------------------------------------------------------------------------
i Manis_javanica.JSZB01003497.1                          I 2 C 0
s Manis_pentadactyla.KN006162.1                              50475  2 -    317179 GA-------------------------------------------------------------------------------
i Manis_pentadactyla.KN006162.1                          I 2 C 0
s Marmota_marmota.CZRN01000018.1                          33103122 12 -  40650429 GA---G----------------------------TAG---AAT---G--C------------------------------A
i Marmota_marmota.CZRN01000018.1                         I 2 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        10323  6 -    207569 ------------------------------------------A---ATAT------------------------------A
i Megaderma_lyra.MegLyr_scaffold_4542                    I 8 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10026 12 +     13704 AA---G----------------------------TGG---AAT---G--C------------------------------A
i Mellivora_capensis.MelCap_flattened_line_69365         I 2 C 0
s Mico_argentatus.k141_1239457                                5750 12 -      7380 ga---g----------------------------tag---aat---g--t------------------------------a
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               4823 12 +     18990 GA---G----------------------------TAG---AAT---G--T------------------------------A
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      5762 12 -      7356 ga---g----------------------------tag---aat---g--t------------------------------a
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18291529 12 -  93316391 GA---G----------------------------tag---aat---a--t------------------------------t
i Microcebus_murinus.CM007674.1                          I 2 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    22126 12 -    145209 GA---G----------------------------TGA---AAT---G--T------------------------------A
i Microgale_talazaci.MicTal_scaffold_6613                I 2 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                15633 12 -     19307 GA---G----------------------------TAG---AAT---G--T------------------------------A
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 2 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850605  6 +   8254450 ------------------------------------------T-ATA--T------------------------------A
i Miniopterus_natalensis.LDJU01000034.1                  I 1 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34286  6 +     64694 ------------------------------------------T-ATA--T------------------------------A
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 1 C 0
s Miopithecus_ogouensis.k141_534055                           9158 12 -     28506 ga---g----------------------------tag---aat---g--t------------------------------a
i Miopithecus_ogouensis.k141_534055                      T 76 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         5694 12 -      8324 GA---G----------------------------TGG---AAT---G--C------------------------------A
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 2 C 0
s Mirza_zaza.k141_952172                                      9074 12 -     37649 GA---G----------------------------TAG---AAT---A--T------------------------------A
i Mirza_zaza.k141_952172                                 I 2 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141598 12 -    366855 GA---G----------------------------TAG---AAT---G--T------------------------------A
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 2 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35403 12 +     37127 GA---G----------------------------TGG---AAT---G--C------------------------------A
i Mungos_mungo.MunMun_flattened_line_23663               I 2 C 0
s Murina_feae.MurFea_scaffold_85699                           6793 14 +     14753 GA---G----------------------------TAG---CAT-ATA--G------------------------------A
i Murina_feae.MurFea_scaffold_85699                      I 2 C 0
s Mustela_putorius.JH418006.1                               301217 12 -  14710649 AA---G----------------------------TGG---AAT---G--C------------------------------A
i Mustela_putorius.JH418006.1                            I 2 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71294 12 -     80779 GA---G----------------------------TGC---AGT---G--T------------------------------A
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 2 C 0
s Myotis_brandtii.KE162005.1                                280436 14 -  10118263 GA---G----------------------------TAG---CAT-ATA--G------------------------------A
i Myotis_brandtii.KE162005.1                             I 2 C 0
s Myotis_davidii.KB100139.1                                1587704 14 -   6019432 GA---A----------------------------TAG---CAT-ATA--C------------------------------A
i Myotis_davidii.KB100139.1                              I 2 C 0
s Myotis_lucifugus.GL429869.1                              3903790 14 -   4330536 GA---G----------------------------TAG---CAT-ATA--G------------------------------A
i Myotis_lucifugus.GL429869.1                            I 2 C 0
s Myotis_myotis.MyoMyo_scaffold_482318                         464 14 -       721 GA---G----------------------------TAG---CAT-ATA--G------------------------------A
i Myotis_myotis.MyoMyo_scaffold_482318                   I 2 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189241 12 +    196477 GA---G----------------------------TAG---AAT---A--T------------------------------A
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 2 C 0
s Nasalis_larvatus.k141_413338                               15133 12 +     21681 GA---G----------------------------TAG---AAT---G--T------------------------------A
i Nasalis_larvatus.k141_413338                           T 96 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306948 12 +  31847680 GA---G----------------------------TGG---AAT---G--C------------------------------A
i Neomonachus_schauinslandi.NINY01007730.1               I 2 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149360 12 -   9404916 GA---G----------------------------TGG---AAT---G--C------------------------------A
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 2 C 0
s Nycticebus_bengalensis.LG01                            102586270 12 - 196305487 TA---G----------------------------TAG---AAT---G--T------------------------------A
i Nycticebus_bengalensis.LG01                            I 2 C 0
s Nycticebus_coucang.k141_1127096                              194 12 +      2075 TA---G----------------------------TAG---AAT---G--T------------------------------A
i Nycticebus_coucang.k141_1127096                        I 2 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761624 12 + 199412804 TA---G----------------------------TAG---AAT---G--T------------------------------A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 2 C 0
s Ochotona_princeps.JH802162.1                             1363502 12 +   3988456 Ga---g----------------------------tag---aat---g--a------------------------------a
i Ochotona_princeps.JH802162.1                           I 2 C 0
s Octodon_degus.JH651603.1                                  746904 12 +  11899542 GG---G----------------------------TAC---AAT---G--t------------------------------a
i Octodon_degus.JH651603.1                               I 2 C 0
s Odobenus_rosmarus.KB229312.1                              506633 12 -   2017862 GA---G----------------------------TGG---AAT---G--C------------------------------A
i Odobenus_rosmarus.KB229312.1                           I 2 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9826 12 -     18566 AA---G----------------------------TAG---GAT---A--T------------------------------A
i Orycteropus_afer.OryAfe_flattened_line_144387          I 2 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147360 12 + 174332312 GA---G----------------------------TAT---Aat---g--a------------------------------g
i Oryctolagus_cuniculus.CM000791.1                       I 2 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462328 12 -    559221 GA---G----------------------------TGG---AAC---G--C------------------------------A
i Otocyon_megalotis.JAEUCK010005147.1                    I 2 C 0
s Otolemur_crassicaudatus.k141_222918                         4189 12 +      8798 GA---G----------------------------TAA---AAT---G--T------------------------------A
i Otolemur_crassicaudatus.k141_222918                    I 2 C 0
s Otolemur_garnettii.GL873799.1                             696352 12 -   1103335 GA---G----------------------------TAA---AAT---G--T------------------------------A
i Otolemur_garnettii.GL873799.1                          I 2 C 0
s Pan_paniscus.KQ411613.1                                    44087 12 +     80009 GA---G----------------------------TTG---AAT---G--T------------------------------A
i Pan_paniscus.KQ411613.1                                T 99 C 0
s Pan_troglodytes.NBAG03001836.1                             30012 12 +     51860 GA---G----------------------------TTG---AAT---G--T------------------------------A
i Pan_troglodytes.NBAG03001836.1                         I 1 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  151153 12 +    230217 GA---A----------------------------TGG---AAT---G--C------------------------------A
i Panthera_onca.PanOnc_flattened_line_3271               I 2 C 0
s Panthera_pardus.KV860321.1                                264362 12 +  18783137 GA---A----------------------------TGG---AAT---G--C------------------------------A
i Panthera_pardus.KV860321.1                             I 2 C 0
s Panthera_tigris.KE722367.1                               4721241 12 -   8748460 GA---A----------------------------TGG---AAT---G--C------------------------------A
i Panthera_tigris.KE722367.1                             I 2 C 0
s Papio_anubis.CM001495.2                                183443183 12 + 183742232 GA---G----------------------------TAG---ACT---G--T------------------------------a
i Papio_anubis.CM001495.2                                T 140 C 0
s Papio_cynocephalus.k141_4307930                             6881 12 +     20448 GA---G----------------------------TAG---ACT---G--T------------------------------A
i Papio_cynocephalus.k141_4307930                        T 88 C 0
s Papio_hamadryas.Contig39                                20563689 12 +  20919399 GA---G----------------------------TAG---ACT---G--T------------------------------A
i Papio_hamadryas.Contig39                               T 92 C 0
s Papio_kindae.k141_1936966                                   5625 12 +     41871 GA---G----------------------------TAG---ACT---G--T------------------------------A
i Papio_kindae.k141_1936966                              T 88 C 0
s Papio_papio.k141_802527                                     8910 12 +     27711 GA---G----------------------------TAG---ACT---G--T------------------------------A
i Papio_papio.k141_802527                                T 96 C 0
s Papio_ursinus.k141_3428135                                  8991 12 +      9205 GA---G----------------------------TAG---ACT---G--T------------------------------A
i Papio_ursinus.k141_3428135                             T 84 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12635 12 -     78924 GA---G----------------------------TGG---AAA---G--C------------------------------A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 2 C 0
s Perodicticus_ibeanus.k141_855320                           10159 12 +     13100 GA---G----------------------------TAG---AAT---G--T------------------------------A
i Perodicticus_ibeanus.k141_855320                       I 2 C 0
s Perodicticus_potto.k141_1092580                             8565 12 +     25941 GA---G----------------------------TAG---AAT---G--T------------------------------A
i Perodicticus_potto.k141_1092580                        I 2 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28181  9 -     29689 GA---G----------------------------TGG---AAT--------------------------------------
i Petromus_typicus.PetTyp_scaffold_42190                 I 2 I 14
s Piliocolobus_badius.k141_1234363                           43644 12 +     62158 GA---G----------------------------TAG---AAT---G--T------------------------------A
i Piliocolobus_badius.k141_1234363                       T 80 C 0
s Piliocolobus_gordonorum.k141_381342                        38375  9 +     89929 GA---G----------------------------TAG---AAT--------------------------------------
i Piliocolobus_gordonorum.k141_381342                    T 96 I 3
s Piliocolobus_kirkii.k141_448987                            39791  9 +     51399 GA---G----------------------------TAG---AAT--------------------------------------
i Piliocolobus_kirkii.k141_448987                        T 96 I 3
s Piliocolobus_tephrosceles.PDMG02000141.1                14296029  9 -  14605196 GA---G----------------------------TAG---AAT--------------------------------------
i Piliocolobus_tephrosceles.PDMG02000141.1               T 96 I 3
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1740 14 +     22620 GA---G----------------------------CAG---CAT-ATA--G------------------------------G
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 2 C 0
s Pongo_abelii.CM009266.2                                189131129 12 + 189387572 GA---G----------------------------TAG---AAT---G--T------------------------------A
i Pongo_abelii.CM009266.2                                T 99 C 0
s Pongo_pygmaeus.ctg66                                     9570737 12 +   9816681 GA---G----------------------------TAG---AAT---G--T------------------------------A
i Pongo_pygmaeus.ctg66                                   T 97 C 0
s Presbytis_comata.k141_677006                               73313 12 -     81375 ga---g----------------------------tag---aat---g--t------------------------------a
i Presbytis_comata.k141_677006                           T 92 C 0
s Presbytis_mitrata.k141_1087752                              5133 12 +     19060 GA---G----------------------------TAG---AAT---G--T------------------------------A
i Presbytis_mitrata.k141_1087752                         T 92 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 13335 12 -     22811 GA---G----------------------------CAG---AAT---G--T------------------------------A
i Procavia_capensis.ProCapCap_scaffold_85530             I 2 C 0
s Prolemur_simus.MPIZ01000396.1                            2596789 12 -   4620579 GC---G----------------------------TAG---AAT---A--T------------------------------A
i Prolemur_simus.MPIZ01000396.1                          I 2 C 0
s Propithecus_coquerelli.NW_012148875.1                     990770 12 +   2598838 GA---G----------------------------TAG---AAT---A--T------------------------------A
i Propithecus_coquerelli.NW_012148875.1                  I 2 C 0
s Propithecus_coronatus.k141_347390                          29082 12 +     38485 GA---G----------------------------TAG---AAT---A--T------------------------------A
i Propithecus_coronatus.k141_347390                      I 2 C 0
s Propithecus_diadema.k141_58108                              1125 12 -     13098 GA---G----------------------------TAG---AAT---A--T------------------------------A
i Propithecus_diadema.k141_58108                         I 2 C 0
s Propithecus_edwardsi.k141_1176054                          26603 12 +     35766 GA---G----------------------------TAG---AAT---A--T------------------------------A
i Propithecus_edwardsi.k141_1176054                      I 2 C 0
s Propithecus_perrieri.k141_1200571                           4790 12 -     24134 GA---G----------------------------TAG---AAT---A--T------------------------------A
i Propithecus_perrieri.k141_1200571                      I 2 C 0
s Propithecus_tattersalli.k141_790011                        28615 12 -     67325 AA---G----------------------------TAG---AAT---A--T------------------------------A
i Propithecus_tattersalli.k141_790011                    I 2 C 0
s Propithecus_verreauxi.k141_956661                           4838 12 -      6182 GA---G----------------------------TAG---AAT---A--T------------------------------A
i Propithecus_verreauxi.k141_956661                      I 2 C 0
s Pteronotus_parnellii.KE909381.1                            15051 12 -     21811 GA---G----------------------------TAG---AAC---A--C------------------------------A
i Pteronotus_parnellii.KE909381.1                        I 2 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40216 12 +     42204 AA---G----------------------------TGG---AAT---G--C------------------------------A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 2 C 0
s Pteropus_alecto.KB030862.1                              22976768  6 +  28871421 GC---A----------------------------TAA--------------------------------------------
i Pteropus_alecto.KB030862.1                             I 2 I 4
s Pteropus_vampyrus.KN534172.1                                6821  6 -      8028 GC---A----------------------------TAA--------------------------------------------
i Pteropus_vampyrus.KN534172.1                           I 2 I 4
s Puma_concolor.QAVW01001104.1                            20274307 12 -  38429054 GA---A----------------------------TGG---AAT---G--C------------------------------A
i Puma_concolor.QAVW01001104.1                           I 2 C 0
s Pygathrix_cinerea.k141_1153803                             15142 12 -     91421 ga---g----------------------------tag---aat---g--t------------------------------a
i Pygathrix_cinerea.k141_1153803                         T 96 C 0
s Pygathrix_nigripes_b.ctg100                                 7609262 12 +   7812017 GA---G----------------------------TAG---AAT---G--T------------------------------A
i Pygathrix_nigripes_b.ctg100                               T 96 C 0
s Pygathrix_nigripes_a.k141_215492                             15114 12 -     72585 ga---g----------------------------tag---aat---g--t------------------------------a
i Pygathrix_nigripes_a.k141_215492                         T 96 C 0
s Rhinopithecus_bieti.k119_217274                             6828 12 -     11128 GA---G----------------------------Tag---aat---g--t------------------------------a
i Rhinopithecus_bieti.k119_217274                        T 95 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236181 12 - 195417433 GA---G----------------------------TAG---AAT---G--T------------------------------A
i Rhinopithecus_roxellana.NC_044550.1                    T 89 C 0
s Rhinopithecus_strykeri.ctg102                            7671833 12 +   7961872 GA---G----------------------------TAG---AAT---G--T------------------------------A
i Rhinopithecus_strykeri.ctg102                          T 95 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87789  6 -     96226 AC---A----------------------------TAA--------------------------------------------
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 2 I 4
s Saguinus_bicolor.k141_2619299                               8149 12 -      8359 ga---c----------------------------tag---aat---g--t------------------------------a
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_imperator.k141_2524406                             2107 12 +      2197 GA---G----------------------------TAG---AAT---G--T------------------------------A
i Saguinus_imperator.k141_2524406                        C 0 C 0
s Saguinus_inustus.k141_699149                               13526 12 +     13640 GA---G----------------------------TAG---AAT---G--T------------------------------A
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               8395 12 +      8564 GA---C----------------------------TAG---AAT---G--T------------------------------A
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469246 11 + 209938924 -A---G----------------------------TAG---AAT---G--T------------------------------A
i Saguinus_midas.LG03                                    I 1 C 0
s Saguinus_mystax.k141_374627                                 7951  9 -      9399 ga---g----------------------------tag---aat--------------------------------------
i Saguinus_mystax.k141_374627                            C 0 I 3
s Saimiri_boliviensis.NW_024100920.1                     119950863 12 - 121099817 GA---G----------------------------TAG---AAT---G--T------------------------------A
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23320 11 +     46362 -A---G----------------------------TAG---AAT---G--T------------------------------A
i Saimiri_cassiquiarensis.k141_2188234                   I 1 C 0
s Saimiri_macrodon.k141_716185                               23415 11 +     45824 -A---G----------------------------TAG---AAT---G--T------------------------------A
i Saimiri_macrodon.k141_716185                           I 1 C 0
s Saimiri_oerstedii.k141_1487881                             40042 12 -     64574 ga---g----------------------------tag---aat---g--t------------------------------a
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               3048 12 -     23631 ga---g----------------------------tag---aat---g--t------------------------------a
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 23310 12 -     61129 ga---g----------------------------tag---aat---g--t------------------------------a
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420633 12 -   5703754 ga---g----------------------------tag---aat---g--t------------------------------a
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          55674 12 -     80660 ga---g----------------------------tag---aat---g--t------------------------------a
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153197 12 -    313613 GA---A----------------------------TAG---AAT---A--T------------------------------A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 2 C 0
s Semnopithecus_entellus.k141_11662                          19653 12 -     19888 GA---G----------------------------TAG---AAT---G--T------------------------------A
i Semnopithecus_entellus.k141_11662                      T 94 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26856 12 +     39453 GA---G----------------------------TAG---AAT---G--T------------------------------A
i Semnopithecus_hypoleucos.k141_1615806                  T 96 C 0
s Semnopithecus_johnii.k141_670120                            7375 11 +     27826 GA---G----------------------------TAG---AAT---G--T-------------------------------
i Semnopithecus_johnii.k141_670120                       T 96 I 1
s Semnopithecus_priam.k141_638794                             6896 12 -     19483 ga---g----------------------------tag---aat---g--t------------------------------a
i Semnopithecus_priam.k141_638794                        T 96 C 0
s Semnopithecus_schistaceus.k141_1584426                      6964 12 +      7198 GA---G----------------------------TAG---AAT---G--T------------------------------A
i Semnopithecus_schistaceus.k141_1584426                 I 1 C 0
s Semnopithecus_vetulus.k141_1200928                         15222 12 +     15514 GA---G----------------------------TAG---AAT---G--T------------------------------A
i Semnopithecus_vetulus.k141_1200928                     I 1 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               3757 12 +   1910179 GA---G----------------------------CAC---AAT---A--T------------------------------G
i Solenodon_paradoxus.SolPar_flattened_line_126          I 2 C 0
s Sorex_araneus.JH798187.1                                13651003 12 -  18376816 GA---G----------------------------AAC---AAT---A--T------------------------------A
i Sorex_araneus.JH798187.1                               I 2 C 0
s Spermophilus_dauricus.KZ294078.1                         1953977 12 -   3870691 GA---G----------------------------TAG---AAT---G--C------------------------------A
i Spermophilus_dauricus.KZ294078.1                       I 2 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30717 12 +     97271 GT---G----------------------------TGG---AAT---G--C------------------------------A
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 2 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              18304 12 -    196729 GA---G----------------------------TGG---AAT---G--C------------------------------A
i Suricata_suricatta.SurSur_flattened_line_6629          I 2 C 0
s Sus_scrofa.CM000828.4                                    6810479 12 +  69701581 GA---G----------------------------TAG---AAT---A--T------------------------------A
i Sus_scrofa.CM000828.4                                  I 2 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                10781  8 +     41958 GA---G----------------------------TAG---TA---------------------------------------
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 2 I 3
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72602 12 +    116680 GA---G----------------------------TAG---AAT---A--T------------------------------A
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 2 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118734 12 -    156842 GA---G----------------------------TAG---AAT---G--T------------------------------A
i Tapirus_indicus.TapInd_scaffold_9301                   I 2 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387191 12 +    539355 GA---G----------------------------TAG---AAT---G--T------------------------------A
i Tapirus_terrestris.TapTer_scaffold_755                 I 2 C 0
s Tarsius_lariang.k141_2201908                               26409 12 +     70052 ga---g----------------------------tag---aat---g--g------------------------------a
i Tarsius_lariang.k141_2201908                           C 0 I 104
s Tarsius_wallacei.k141_254427                                1242 12 -     16117 ga---g----------------------------tag---aat---g--g------------------------------a
i Tarsius_wallacei.k141_254427                           C 0 I 68
s Theropithecus_gelada.CM009954.1                        186428553 12 + 186847797 GA---G----------------------------TAG---ACT---G--T------------------------------a
i Theropithecus_gelada.CM009954.1                        T 88 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105495 12 +    114563 GA---G----------------------------TAG---AAG---G--T------------------------------A
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 2 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   6385 12 +      8208 GA---G----------------------------CAG---AAC---G--T------------------------------A
i Tolypeutes_matacus.TolMat_scaffold_228639              I 2 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81172 12 +    610378 GA---G----------------------------AAT---AAT---G--T------------------------------G
i Tonatia_saurophila.TonSau_scaffold_294                 I 2 C 0
s Trachypithecus_auratus.k141_722599                         10947 12 -     20410 ga---g----------------------------tag---aat---g--t------------------------------a
i Trachypithecus_auratus.k141_722599                     T 96 C 0
s Trachypithecus_crepusculus.k141_582567                        61 12 -     12674 ga---g----------------------------tag---aat---g--t------------------------------a
i Trachypithecus_crepusculus.k141_582567                 T 96 I 5
s Trachypithecus_cristatus.k141_580354                       11048 12 +     19930 GA---G----------------------------TAG---AAT---G--T------------------------------A
i Trachypithecus_cristatus.k141_580354                   T 96 C 0
s Trachypithecus_francoisi.k141_1412647                       7475 12 -     19997 ga---g----------------------------tag---aat---g--t------------------------------a
i Trachypithecus_francoisi.k141_1412647                  T 80 C 0
s Trachypithecus_geei.k141_277701                            47599 12 -     60166 ga---g----------------------------tag---aat---g--t------------------------------a
i Trachypithecus_geei.k141_277701                        T 95 C 0
s Trachypithecus_germaini.k141_912491                        15070 12 -     27529 ga---g----------------------------tag---aat---g--t------------------------------a
i Trachypithecus_germaini.k141_912491                    T 96 C 0
s Trachypithecus_hatinhensis.k141_143409                     15014 12 -     18194 ga---g----------------------------tag---aat---g--t------------------------------a
i Trachypithecus_hatinhensis.k141_143409                 T 96 C 0
s Trachypithecus_laotum.k141_907409                           8742 12 -     21137 ga---g----------------------------tag---aat---g--t------------------------------a
i Trachypithecus_laotum.k141_907409                      T 80 C 0
s Trachypithecus_leucocephalus.k141_587342                    7445 12 -     10723 Ga---g----------------------------tag---aat---g--t------------------------------a
i Trachypithecus_leucocephalus.k141_587342               T 80 C 0
s Trachypithecus_melamera.k141_434728                         6601 12 +      9834 GA---G----------------------------TAG---AAT---G--T------------------------------A
i Trachypithecus_melamera.k141_434728                    T 96 C 0
s Trachypithecus_obscurus.k141_190785                        24914 12 +     32220 GA---G----------------------------TAG---AAT---G--T------------------------------A
i Trachypithecus_obscurus.k141_190785                    T 96 C 0
s Trachypithecus_phayrei.ctg124                            5939016 12 +   6242583 GA---G----------------------------TAG---AAT---G--T------------------------------A
i Trachypithecus_phayrei.ctg124                          T 96 C 0
s Trachypithecus_pileatus.k141_2007326                        8268 12 +     20839 GA---G----------------------------TAG---AAT---G--T------------------------------A
i Trachypithecus_pileatus.k141_2007326                   T 95 C 0
s Trichechus_manatus.JH594705.1                            4293234 12 +  10818551 gg---g----------------------------tag---aat---g--t------------------------------a
i Trichechus_manatus.JH594705.1                          I 2 C 0
s Tupaia_chinensis.KB320699.1                              2155656 11 +   4065304 AA---G----------------------------TAG---CAG---G--T-------------------------------
i Tupaia_chinensis.KB320699.1                            I 2 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9307 11 -     10553 GA---G----------------------------TAG---AAT---G--T-------------------------------
i Tupaia_tana.TupTan_flattened_line_97126                I 2 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   53303 11 -     77625 GA---G----------------------------AAA---AAT---A--T-------------------------------
i Uropsilus_gracilis.UroGra_scaffold_12083               I 2 C 0
s Ursus_maritimus.KK499267.1                               4850422 12 -   5085361 GA---G----------------------------TGG---AAT---G--C------------------------------A
i Ursus_maritimus.KK499267.1                             I 2 C 0
s Varecia_rubra.k141_590885                                  11449 12 +     50397 GT---G----------------------------TAG---AAT---A--T------------------------------A
i Varecia_rubra.k141_590885                              I 2 C 0
s Varecia_variegata.k141_1128296                             11508 12 +     24756 GT---G----------------------------TAG---AAT---A--T------------------------------A
i Varecia_variegata.k141_1128296                         I 2 C 0
s Vicugna_pacos.KN270157.1                                 5371860 12 -   5488506 GA---G----------------------------TAG---ATT---A--T------------------------------A
i Vicugna_pacos.KN270157.1                               I 2 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10773 12 -     43706 AA---G----------------------------TGG---AAT---G--C------------------------------A
i Vulpes_lagopus.VulLag_flattened_line_30954             I 2 C 0
s Xerus_inauris.XerIna_scaffold_2302                          1117 12 +    224448 GA---G----------------------------TAG---AAT---G--C------------------------------A
i Xerus_inauris.XerIna_scaffold_2302                     I 2 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          5346 12 +     86975 GA---G----------------------------TGG---AAT---G--C------------------------------A
i Zalophus_californianus.ZalCal_flattened_line_17732     I 2 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      14993  1 +     63895 G--------------------------------------------------------------------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 2 C 0
e Mus_pahari.LT608297.1                                   31355110  4 -  89631738 I
e Mus_spretus.CM004101.1                                  90752512  4 - 130317789 I
e Mus_musculus.chr8                                       87650451  4 - 129401213 I
e Mus_caroli.LT608237.1                                   84361453  4 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Sigmodon_hispidus.SigHis_scaffold_42075                      411  4 -     30804 I
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570713  4 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Psammomys_obesus.NESX01036370.1                            10483  4 -     21651 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Peromyscus_maniculatus.KI615324.1                       18194865  4 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80239  4 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   25239  4 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Nannospalax_galili.KL204047.1                            2034163  2 -   3037898 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11260571  4 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182333  4 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 32827 16 +    140813 I
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Ellobius_talpinus.LOJH01081419.1                             523  4 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          20392  4 -    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cricetulus_griseus.LT883664.1                           11667658  4 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 50291  2 +     63868 I
e Colobus_guereza.LG01                                   199948958  0 + 200372422 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     70877 18 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       6751  5 +     62944 t--tc-------t--------------------------a
s Acinonyx_jubatus.LLWD01001279.1                           827312 10 -   1699592 C--TCTCCTC--T--------------------------A
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510573 10 -  29979442 C--TGTCCTC--T--------------------------A
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             79343 10 -    347723 C--TCTCCTC--T--------------------------A
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14680  4 -     52922 t--tc-------t---------------------------
i Allenopithecus_nigroviridis.k141_3361533               C 0 I 1
s Allochrocebus_lhoesti.k141_4309873                         14616  4 -     28001 t--tc-------t---------------------------
i Allochrocebus_lhoesti.k141_4309873                     C 0 I 1
s Allochrocebus_preussi.k141_1442296                          5112  4 -     18505 t--tc-------t---------------------------
i Allochrocebus_preussi.k141_1442296                     C 0 I 1
s Allochrocebus_solatus.k141_166128                           5966  4 -     12518 t--tc-------t---------------------------
i Allochrocebus_solatus.k141_166128                      C 0 I 1
s Alouatta_belzebul.k141_3560514                              7432  4 +     51355 T--TG-------T---------------------------
i Alouatta_belzebul.k141_3560514                         C 0 I 1
s Alouatta_caraya.k141_1701091                                 554  4 -     36483 t--tg-------t---------------------------
i Alouatta_caraya.k141_1701091                           C 0 I 14
s Alouatta_discolor.k141_743489                               3618  5 -     45847 T--TG-------T--------------------------A
i Alouatta_discolor.k141_743489                          C 0 T 21
s Alouatta_juara.k141_1509701                                24823  4 +     25266 T--TG-------T---------------------------
i Alouatta_juara.k141_1509701                            C 0 I 1
s Alouatta_macconnelli.k141_918386                             548  4 -      9457 t--tg-------t---------------------------
i Alouatta_macconnelli.k141_918386                       C 0 I 1
s Alouatta_nigerrima.k141_3472759                            18126  4 -     18578 t--tg-------t---------------------------
i Alouatta_nigerrima.k141_3472759                        C 0 I 1
s Alouatta_palliata.k141_2135620                              3525  4 +     47717 T--TG-------T---------------------------
i Alouatta_palliata.k141_2135620                         C 0 I 1
s Alouatta_puruensis.k141_362188                               222  4 +      5663 T--TG-------T---------------------------
i Alouatta_puruensis.k141_362188                         C 0 I 1
s Alouatta_seniculus.k141_117119                             14842 31 +     50774 T--TG-------TAAAGAAGAAAGAGAAAAAAGAAGGGAG
i Alouatta_seniculus.k141_117119                         T 30 T 26
s Anoura_caudifer.AnoCau_scaffold_1412                      185338 10 +    412891 T--ACTCCC-T-T--------------------------A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  15467  4 -     33861 t--tg-------t---------------------------
i Aotus_azarae.k141_3104676                              C 0 I 1
s Aotus_griseimembra.k141_2240599                            15487  4 -     34016 t--tg-------t---------------------------
i Aotus_griseimembra.k141_2240599                        C 0 I 1
s Aotus_nancymaae.KZ198451.1                               4297884  4 -   5030052 t--tg-------t---------------------------
i Aotus_nancymaae.KZ198451.1                             C 0 I 1
s Aotus_trivirgatus.k141_2152450                             15489  4 -     34685 t--tg-------t---------------------------
i Aotus_trivirgatus.k141_2152450                         C 0 I 1
s Aotus_vociferans.k141_344750                               28613  4 -     47192 t--tg-------t---------------------------
i Aotus_vociferans.k141_344750                           C 0 I 1
s Aplodontia_rufa.AprRuf_scaffold_68852                      12671  1 +     20879 T---------------------------------------
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 27
s Arctocebus_calabarensis.k141_2318572                       11535  5 +     14667 T--TC-------T--------------------------A
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4747 10 +     43469 T--ACTCCC-T-T--------------------------A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  53738  5 -     92717 T--TC-------T--------------------------A
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54365  5 +     85213 T--TC-------T--------------------------A
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             5222  4 -     10423 t--tg-------t---------------------------
i Callibella_humilis.k141_1278103                        C 0 I 1
s Callimico_goeldii.k141_1091182                             24694  3 +     31915 T--Tg-----------------------------------
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            5188  5 +      5267 T--TG-------T--------------------------a
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590402  4 - 189096842 t--tg-------t---------------------------
i Callithrix_jacchus.pat_scaffold_3                      C 0 I 1
s Callithrix_kuhlii.k119_1164682                             11933  5 -     12001 T--TG-------T--------------------------A
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002369 10 -  17673402 G--TATCC-TT-T--------------------------A
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334827 10 -   7040546 G--TATCC-TT-T--------------------------A
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  403110 10 -   1652518 G--TATCC-TT-T--------------------------A
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17799162 10 -  60362399 C--TCTCCTC--T--------------------------A
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    185219 10 -    185531 C--TCTCCTC--T--------------------------A
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034605 10 -   9314153 C--TCTCCTC--T--------------------------A
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17958870 10 -  59632846 C--TCTCCTC--T--------------------------A
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18500382 10 +  63665305 C--TCTCCTC--T--------------------------A
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           156035  1 -    496798 ---------------------------------------g
i Carlito_syrichta.NW_007259797.1                        I 758 I 31
s Capromys_pilorides.CapPil_scaffold_65020                    1120  1 -     12242 T---------------------------------------
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 16
s Carollia_perspicillata.CarPer_scaffold_92756                5105 10 -     11696 T--ACTCC-AT-T--------------------------A
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137144  1 +    179628 T---------------------------------------
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 9
s Catagonus_wagneri.CatWag_scaffold_2839                     92999 10 +    217609 C--TCTCC-TT-T--------------------------A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          9847  4 -     11392 t--tg-------t---------------------------
i Cebuella_niveiventris.k141_1251222                     C 0 I 1
s Cebuella_pygmaea.k141_1309012                               5945  4 -      7577 t--tg-------t---------------------------
i Cebuella_pygmaea.k141_1309012                          C 0 I 1
s Cebus_albifrons.Contig27                                25651974  4 +  26074798 t--tg-------t---------------------------
i Cebus_albifrons.Contig27                               C 0 I 1
s Cebus_olivaceus.k141_398305                                 1550  5 +      1777 T--TG-------T--------------------------A
i Cebus_olivaceus.k141_398305                            C 0 C 0
s Cebus_unicolor.k141_544048                                 49887  5 -     74725 t--tg-------t--------------------------a
i Cebus_unicolor.k141_544048                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         5533  1 +     31688 ---------------------------------------g
i Cephalopachus_bancanus.k141_1423433                    I 114 T 115
s Ceratotherium_simum.JH767749.1                          12231427 10 +  27778364 T--TCTCC-TT-C--------------------------A
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2454 10 -     25243 T--TCTCC-TT-C--------------------------A
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4475625  4 +   4669795 t--tc-------t---------------------------
i Cercocebus_atys.KQ010504.1                             C 0 I 1
s Cercocebus_chrysogaster.k141_393940                        14170  4 -     19203 t--tc-------t---------------------------
i Cercocebus_chrysogaster.k141_393940                    C 0 I 1
s Cercocebus_lunulatus.k141_3342297                            786  4 -     14043 t--tc-------t---------------------------
i Cercocebus_lunulatus.k141_3342297                      C 0 I 1
s Cercocebus_torquatus.k141_3057011                           8822  4 +     27781 T--TC-------T---------------------------
i Cercocebus_torquatus.k141_3057011                      C 0 I 1
s Cercopithecus_ascanius.k141_1024104                         8987  4 -     20310 t--tc-------t---------------------------
i Cercopithecus_ascanius.k141_1024104                    C 0 I 1
s Cercopithecus_cephus.k141_1078548                          11966  4 +     29689 T--TC-------T---------------------------
i Cercopithecus_cephus.k141_1078548                      C 0 I 1
s Cercopithecus_diana.k141_1150327                            6720  4 -     20078 t--tc-------t---------------------------
i Cercopithecus_diana.k141_1150327                       C 0 I 1
s Cercopithecus_hamlyni.k141_187466                          14643  4 -     27936 t--tc-------t---------------------------
i Cercopithecus_hamlyni.k141_187466                      C 0 I 1
s Cercopithecus_lowei.k141_1854285                            3507  4 -     17152 t--tc-------t---------------------------
i Cercopithecus_lowei.k141_1854285                       C 0 I 1
s Cercopithecus_albogularis.ctg5                                38817046  4 +  39242232 T--TC-------T---------------------------
i Cercopithecus_albogularis.ctg5                               C 0 I 1
s Cercopithecus_mona.ctg39                                21222738  4 -  21565898 t--tc-------t---------------------------
i Cercopithecus_mona.ctg39                               C 0 I 1
s Cercopithecus_neglectus.k141_2526306                       39856  4 -     53127 t--tc-------t---------------------------
i Cercopithecus_neglectus.k141_2526306                   C 0 I 1
s Cercopithecus_nictitans.k141_1119848                         107  5 +     27489 T--TC-------T--------------------------a
i Cercopithecus_nictitans.k141_1119848                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14656  4 -     27947 t--tc-------t---------------------------
i Cercopithecus_petaurista.k141_807961                   C 0 I 1
s Cercopithecus_pogonias.k141_822820                         14632  4 +     17596 T--TC-------T---------------------------
i Cercopithecus_pogonias.k141_822820                     C 0 I 1
s Cercopithecus_roloway.k141_2581234                           679  4 +     14005 T--TC-------T---------------------------
i Cercopithecus_roloway.k141_2581234                     C 0 I 1
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             524 10 -      8501 T--TCTC-TGA-T--------------------------A
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             21117  7 -     52598 TGTTC-------T--------------------------A
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16482  7 +     57038 TGTTC-------T--------------------------A
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1252869  1 +   2543920 t---------------------------------------
i Chinchilla_lanigera.JH722012.1                         C 0 I 15
s Chiropotes_albinasus.k141_2813271                          11099  5 +     11226 T--TG-------T--------------------------A
i Chiropotes_albinasus.k141_2813271                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18428616  4 -  18827391 t--tc-------t---------------------------
i Chlorocebus_aethiops.ctg25                             C 0 I 1
s Chlorocebus_pygerythrus.k141_1025673                       15053  4 -     50209 t--tc-------t---------------------------
i Chlorocebus_pygerythrus.k141_1025673                   C 0 I 1
s Chlorocebus_sabaeus.CM001947.1                         135422053  4 + 135778131 T--tc-------t---------------------------
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 1
s Choloepus_didactylus.ChoDid_scaffold_45914                 18302 10 +     19366 T--TCTCCTC--T--------------------------A
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            173378 10 +    839153 T--TCTCCTC--T--------------------------A
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1910558  4 +   2368649 t--tc-------t---------------------------
i Colobus_angolensis.KN981557.1                          I 3 I 1
s Colobus_polykomos.k141_906115                              37096  4 +     84244 T--TC-------T---------------------------
i Colobus_polykomos.k141_906115                          I 3 I 1
s Condylura_cristata.JH655891.1                           17548094 10 -  53390261 T--TCTC-TTT-T--------------------------A
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14394 10 -     20389 T--GCTCC-TT-T--------------------------A
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 6 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               2985 10 -     19598 T--TTTCC-AA-T--------------------------A
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28483 10 -     87169 C--TCTCCTC--T--------------------------A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837150  1 +   1526836 G---------------------------------------
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 8
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35827  1 +     51376 T---------------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 16
s Dasypus_novemcinctus.JH564415.1                            63531 10 +   2246927 T--TCTC-TGA-T--------------------------A
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537336  5 -  12879189 T--TC-------T--------------------------A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630118 10 +  20541912 T--ACTCCC-T-T--------------------------G
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673278 10 +   1390856 T--TCTCC-TT-C--------------------------A
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6030 10 +    198055 T--TCTCC-TT-C--------------------------A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36462  1 +     67921 T---------------------------------------
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 16
s Echinops_telfairi.JH980293.1                            48780391 10 + 111700974 T--TCTTCTC--T--------------------------A
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.KE759718.1                                  10519 10 +     11740 T--GCTC-ATT-T--------------------------A
i Eidolon_helvum.KE759718.1                              I 4 C 0
s Elephantulus_edwardii.JH947257.1                         1097711  2 +  10337057 T--T------------------------------------
i Elephantulus_edwardii.JH947257.1                       C 0 I 2
s Enhydra_lutris.KZ291758.1                               16329301 10 -  41312741 C--TCTCCTC--T--------------------------A
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2145710 10 -  14770903 T--GCTCC-TT-T--------------------------C
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1283536 10 +   4378816 T--TCTTC-TT-C--------------------------A
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18531357 10 -  39960074 T--TCTTC-TT-C--------------------------A
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               33385 10 +    498745 T--TCTTC-TT-C--------------------------A
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3328234 10 -   7059049 A--TTTCC-AT-T--------------------------A
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21205223  4 -  21539334 t--tc-------t---------------------------
i Erythrocebus_patas.Contig38                            C 0 I 1
s Eulemur_albifrons.k141_342033                              13841  5 -     14127 T--TC-------T--------------------------A
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6544  5 -     16928 T--TC-------T--------------------------A
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15568  5 -     25546 T--TC-------T--------------------------A
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12772  5 +     26330 T--TC-------T--------------------------A
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14007  5 +     23973 T--TC-------T--------------------------A
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12769  5 +     75513 T--TC-------T--------------------------A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10699  5 +     97555 T--TC-------T--------------------------A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              190  5 +     13026 T--TC-------T--------------------------A
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4243  5 -     17153 T--TC-------T--------------------------A
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13816  5 +    111500 T--TC-------T--------------------------A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.AANG03146491.1                                   620 10 -       713 C--TCTCCTC--T--------------------------A
i Felis_catus.AANG03146491.1                             n 10 n 10
s Felis_catus_fca126.CM031415.1                           20195806 10 + 205367284 C--TCTCCTC--T--------------------------A
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  9550 10 -     36744 C--TCTCCTC--T--------------------------A
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             850496  1 +   3816255 t---------------------------------------
i Fukomys_damarensis.KN121974.1                          C 0 I 16
s Galago_moholi.ctg2040                                     426669  5 -    453645 T--TC-------T--------------------------A
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4360  5 +     11339 T--TC-------T--------------------------A
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            1673  5 +     41679 T--TC-------T--------------------------A
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1219  5 -      9135 T--TC-------T--------------------------a
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              16006  4 -     32273 T--TC-------t---------------------------
i Gorilla_beringei.k141_3596273                          C 0 I 1
s Gorilla_gorilla.LT578341.1                             186338152  4 + 186649187 t--tc-------t---------------------------
i Gorilla_gorilla.LT578341.1                             C 0 I 1
s Hapalemur_alaotrensis.k141_170648                           6880  5 -     19426 T--TC-------T--------------------------A
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12029  5 -     15286 T--TC-------T--------------------------A
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13668  5 +     18253 T--TC-------T--------------------------A
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13769  5 -     41752 T--TC-------T--------------------------A
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13606  5 -     16460 T--TC-------T--------------------------A
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242316 10 +    327341 C--TTTCCTC--T--------------------------A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20662284  1 +  22651954 T---------------------------------------
i Heterocephalus_glaber.JH602082.1                       C 0 I 17
s Heterohyrax_brucei.HetBruBak_scaffold_122365                 892 10 +      7595 T--TCTCCTC--A--------------------------A
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hoolock_leuconedys.ctg274                                    434818  4 +    630532 t--tc-------t---------------------------
i Hoolock_leuconedys.ctg274                                 I 3 I 1
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45010 10 +     55795 C--TCTCCTC--A--------------------------A
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83173  1 +    135385 T---------------------------------------
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 17
s Ictidomys_tridecemlineatus.JH393364.1                    7520938  1 -   7955117 T---------------------------------------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 33
s Indri_indri.k141_3655594                                   22559  5 +     31101 T--TC-------T--------------------------A
i Indri_indri.k141_3655594                               C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    14126 10 -     42476 T--GCTCC-TT-T--------------------------C
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15524121  5 -  30322482 T--TC-------T--------------------------A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7484  4 +     64341 T--TG-------T---------------------------
i Leontocebus_fuscicollis.k141_1820339                   C 0 I 1
s Leontocebus_illigeri.k141_3350179                           4807  5 +      4941 T--TG-------T--------------------------A
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        7525  4 +     35603 T--TG-------T---------------------------
i Leontocebus_nigricollis.k141_4610752                   C 0 I 1
s Leontopithecus_chrysomelas.k141_1519602                    28986  4 +     38576 T--TG-------T---------------------------
i Leontopithecus_chrysomelas.k141_1519602                T 221 I 1
s Leontopithecus_rosalia.k141_464620                         25683  4 +     66356 T--TG-------T---------------------------
i Leontopithecus_rosalia.k141_464620                     C 0 I 1
s Lepilemur_ankaranensis.k141_596936                         11015  5 -     23766 T--TC-------T--------------------------A
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29076  5 +     45836 T--TC-------T--------------------------A
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1616  5 +     25010 T--TC-------T--------------------------A
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27012  5 +     54090 T--TC-------T--------------------------A
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3042838 10 +   3914936 C--TCTCCTC--T--------------------------A
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6491  5 -     14121 G--ag-------a--------------------------a
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437172  4 +   1826925 T--TC-------T---------------------------
i Lophocebus_aterrimus.ctg367                            C 0 I 1
s Loris_lydekkerianus.k141_2539221                            5917  5 +     11245 T--TC-------T--------------------------A
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004737  5 +   6120653 T--TC-------T--------------------------A
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4217320 10 -  43346337 T--TCTTCTC--G--------------------------A
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17955110 10 -  59628241 C--TCTCCTC--T--------------------------A
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               6982  4 +     40492 T--TC-------T---------------------------
i Macaca_arctoides.k141_2326796                          I 3 I 1
s Macaca_assamensis.Contig5                               59676241  4 +  60120075 T--TC-------T---------------------------
i Macaca_assamensis.Contig5                              C 0 I 1
s Macaca_cyclopis.k119_18836                                 12754  4 -     26193 t--tc-------t---------------------------
i Macaca_cyclopis.k119_18836                             C 0 I 1
s Macaca_fascicularis.k141_814140                            80538  4 -    114318 t--tc-------t---------------------------
i Macaca_fascicularis.k141_814140                        C 0 I 1
s Macaca_fuscata.k119_255327                                  6229  4 -     23192 t--tc-------t---------------------------
i Macaca_fuscata.k119_255327                             C 0 I 1
s Macaca_leonina.k141_3550399                                15698  4 -     29190 t--tc-------t---------------------------
i Macaca_leonina.k141_3550399                            T 108 I 1
s Macaca_maura.k141_2733130                                  24263  4 +     37952 T--TC-------T---------------------------
i Macaca_maura.k141_2733130                              C 0 I 1
s Macaca_mulatta.NC_041758.1                             186839352  4 + 187317192 t--tc-------t---------------------------
i Macaca_mulatta.NC_041758.1                             C 0 I 1
s Macaca_nemestrina.KQ007038.1                            25457915  4 -  25927173 t--tc-------t---------------------------
i Macaca_nemestrina.KQ007038.1                           C 0 I 1
s Macaca_nigra.k141_1655396                                  80111  4 +     89720 T--TC-------T---------------------------
i Macaca_nigra.k141_1655396                              C 0 I 1
s Macaca_radiata.k141_3680011                                 7112  4 +     20474 T--TC-------T---------------------------
i Macaca_radiata.k141_3680011                            C 0 I 1
s Macaca_siberu.k141_635500                                   6912  4 -     14993 t--tc-------t---------------------------
i Macaca_siberu.k141_635500                              C 0 I 1
s Macaca_silenus.Contig273                                  329778  4 -    668171 t--tc-------t---------------------------
i Macaca_silenus.Contig273                               C 0 I 1
s Macaca_thibetana.k99_256239                                 5228  4 -     24072 t--tc-------t---------------------------
i Macaca_thibetana.k99_256239                            C 0 I 1
s Macaca_tonkeana.k141_1498238                               25850  4 -     45290 t--tc-------t---------------------------
i Macaca_tonkeana.k141_1498238                           C 0 I 1
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90610 10 +     94391 T--GCTC-ATT-T--------------------------A
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 4 C 0
s Mandrillus_leucophaeus.scaffold280                      23937445  4 -  24302211 t--tc-------t---------------------------
i Mandrillus_leucophaeus.scaffold280                     C 0 I 1
s Mandrillus_sphinx.Contig270                               351573  4 +    752769 T--TC-------T---------------------------
i Mandrillus_sphinx.Contig270                            C 0 I 1
s Manis_javanica.JSZB01003497.1                              18488 10 +    737560 T--TCTTC-TT-T--------------------------A
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              50477 10 -    317179 T--TCTTC-TT-T--------------------------A
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33103134  1 -  40650429 T---------------------------------------
i Marmota_marmota.CZRN01000018.1                         C 0 I 37
s Megaderma_lyra.MegLyr_scaffold_4542                        10329 10 -    207569 T--GCTCC-TT-T--------------------------A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10038 10 +     13704 C--TCTCCTC--T--------------------------A
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mico_argentatus.k141_1239457                                5762  4 -      7380 t--tg-------t---------------------------
i Mico_argentatus.k141_1239457                           C 0 I 1
s Mico_humeralifer.k141_1976199                               4835  5 +     18990 T--TG-------T--------------------------a
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      5774  4 -      7356 t--tg-------t---------------------------
i Mico_schneideri.k141_1950671                                 C 0 I 1
s Microcebus_murinus.CM007674.1                           18291541  5 -  93316391 t--tc-------t--------------------------a
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    22138 10 -    145209 T--TCTTCTC--T--------------------------A
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                15645  9 -     19307 T--ACTAC--T-T--------------------------A
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850611 10 +   8254450 T--GCTCC-TT-T--------------------------A
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34292 10 +     64694 T--GCTCC-TT-T--------------------------A
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9170  4 -     28506 t--tc-------t---------------------------
i Miopithecus_ogouensis.k141_534055                      C 0 I 1
s Mirounga_angustirostris.MirAng_flattened_line_93702         5706 10 -      8324 C--TCTCCTC--T--------------------------A
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      9086  5 -     37649 T--TC-------T--------------------------A
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141610 10 -    366855 T--GCTCC-TT-G--------------------------A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35415 10 +     37127 C--TTTCCTC--T--------------------------A
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           6807 10 +     14753 T--TCTCC-TT-T--------------------------C
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mustela_putorius.JH418006.1                               301229 10 -  14710649 C--TCTCCTC--T--------------------------A
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71306  1 -     80779 T---------------------------------------
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 I 16
s Myotis_brandtii.KE162005.1                                280450 10 -  10118263 T--GCTCC-TT-T--------------------------C
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1587718  3 -   6019432 T--GC-----------------------------------
i Myotis_davidii.KB100139.1                              C 0 I 3
s Myotis_lucifugus.GL429869.1                              3903804 10 -   4330536 T--GCTCC-TT-T--------------------------C
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_482318                         478 10 -       721 T--GCTCC-TT-T--------------------------C
i Myotis_myotis.MyoMyo_scaffold_482318                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189253 10 +    196477 C--TCTCCTC--T--------------------------A
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nasalis_larvatus.k141_413338                               15145  4 +     21681 T--TC-------T---------------------------
i Nasalis_larvatus.k141_413338                           C 0 I 1
s Neomonachus_schauinslandi.NINY01007730.1                20306960 10 +  31847680 C--TCTCCTC--T--------------------------A
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149372 10 -   9404916 C--TCTCCTC--T--------------------------A
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102586282  5 - 196305487 T--TC-------T--------------------------A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              206  5 +      2075 T--TC-------T--------------------------A
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761636  5 + 199412804 T--TC-------T--------------------------A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1363514  5 +   3988456 a--ga-------a--------------------------a
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  746916  1 +  11899542 t---------------------------------------
i Octodon_degus.JH651603.1                               C 0 I 16
s Odobenus_rosmarus.KB229312.1                              506645 10 -   2017862 C--TCTCCTC--T--------------------------A
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9838 10 -     18566 T--TCTCCTC--T--------------------------A
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147372  5 + 174332312 g--ag-------a--------------------------a
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462340 10 -    559221 C--TCTCCTC--T--------------------------A
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4201  5 +      8798 T--TC-------T--------------------------A
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696364  5 -   1103335 T--TC-------T--------------------------A
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    44099  4 +     80009 t--tc-------t---------------------------
i Pan_paniscus.KQ411613.1                                C 0 I 1
s Pan_troglodytes.NBAG03001836.1                             30024  4 +     51860 t--tc-------t---------------------------
i Pan_troglodytes.NBAG03001836.1                         C 0 I 1
s Panthera_onca.PanOnc_flattened_line_3271                  151165 10 +    230217 C--TCTCCTC--T--------------------------A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                264374 10 +  18783137 C--TCTCCTC--T--------------------------A
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4721253 10 -   8748460 C--TCTCCTC--T--------------------------A
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183443195  4 + 183742232 t--tc-------t---------------------------
i Papio_anubis.CM001495.2                                C 0 I 1
s Papio_cynocephalus.k141_4307930                             6893  4 +     20448 T--TC-------T---------------------------
i Papio_cynocephalus.k141_4307930                        C 0 I 1
s Papio_hamadryas.Contig39                                20563701  4 +  20919399 T--TC-------T---------------------------
i Papio_hamadryas.Contig39                               C 0 I 1
s Papio_kindae.k141_1936966                                   5637  4 +     41871 T--TC-------T---------------------------
i Papio_kindae.k141_1936966                              C 0 I 1
s Papio_papio.k141_802527                                     8922  4 +     27711 T--TC-------T---------------------------
i Papio_papio.k141_802527                                C 0 I 1
s Papio_ursinus.k141_3428135                                  9003  4 +      9205 T--TC-------T---------------------------
i Papio_ursinus.k141_3428135                             C 0 I 1
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12647 10 -     78924 C--TC-CCC-TCT--------------------------A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10171  5 +     13100 T--TC-------T--------------------------A
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8577  5 +     25941 T--TC-------T--------------------------A
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Piliocolobus_badius.k141_1234363                           43656  4 +     62158 T--Tc-------t---------------------------
i Piliocolobus_badius.k141_1234363                       C 0 I 1
s Piliocolobus_gordonorum.k141_381342                        38387  4 +     89929 T--TC-------T---------------------------
i Piliocolobus_gordonorum.k141_381342                    I 3 I 1
s Piliocolobus_kirkii.k141_448987                            39803  4 +     51399 T--TC-------T---------------------------
i Piliocolobus_kirkii.k141_448987                        I 3 I 1
s Piliocolobus_tephrosceles.PDMG02000141.1                14296041  4 -  14605196 t--tc-------t---------------------------
i Piliocolobus_tephrosceles.PDMG02000141.1               I 3 I 1
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1754 10 +     22620 T--GCTCC-TT-T--------------------------C
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189131141  4 + 189387572 t--tc-------t---------------------------
i Pongo_abelii.CM009266.2                                C 0 I 1
s Pongo_pygmaeus.ctg66                                     9570749  4 +   9816681 T--TC-------T---------------------------
i Pongo_pygmaeus.ctg66                                   C 0 I 1
s Presbytis_comata.k141_677006                               73325  4 -     81375 t--tc-------t---------------------------
i Presbytis_comata.k141_677006                           C 0 I 1
s Presbytis_mitrata.k141_1087752                              5145  4 +     19060 T--TC-------T---------------------------
i Presbytis_mitrata.k141_1087752                         C 0 I 1
s Procavia_capensis.ProCapCap_scaffold_85530                 13347 10 -     22811 T--TCTCCTC--A--------------------------A
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2596801  5 -   4620579 T--TC-------T--------------------------A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990782  5 +   2598838 T--TC-------T--------------------------A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29094  5 +     38485 T--TC-------T--------------------------A
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1137  5 -     13098 T--TC-------T--------------------------A
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26615  5 +     35766 T--TC-------T--------------------------A
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4802  5 -     24134 T--TC-------T--------------------------A
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28627  5 -     67325 T--TC-------T--------------------------A
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4850  5 -      6182 T--TC-------T--------------------------A
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            15063 10 -     21811 C--GCTCC-TT-T--------------------------A
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40228 10 +     42204 C--TCTCCTC--T--------------------------A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22976778 10 +  28871421 T--GCTC-ATT-T--------------------------A
i Pteropus_alecto.KB030862.1                             I 4 C 0
s Pteropus_vampyrus.KN534172.1                                6831 10 -      8028 T--GCTC-ATT-T--------------------------A
i Pteropus_vampyrus.KN534172.1                           I 4 C 0
s Puma_concolor.QAVW01001104.1                            20274319 10 -  38429054 C--TCTCCTC--T--------------------------A
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15154  4 -     91421 t--tc-------t---------------------------
i Pygathrix_cinerea.k141_1153803                         C 0 I 1
s Pygathrix_nigripes_b.ctg100                                 7609274  4 +   7812017 T--TC-------T---------------------------
i Pygathrix_nigripes_b.ctg100                               C 0 I 1
s Pygathrix_nigripes_a.k141_215492                             15126  4 -     72585 t--tc-------t---------------------------
i Pygathrix_nigripes_a.k141_215492                         C 0 I 1
s Rhinopithecus_bieti.k119_217274                             6840  4 -     11128 t--tc-------t---------------------------
i Rhinopithecus_bieti.k119_217274                        C 0 I 1
s Rhinopithecus_roxellana.NC_044550.1                     91236193  4 - 195417433 T--tc-------t---------------------------
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 1
s Rhinopithecus_strykeri.ctg102                            7671845  4 +   7961872 T--TC-------T---------------------------
i Rhinopithecus_strykeri.ctg102                          C 0 I 1
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87799 10 -     96226 T--GCTC-ATT-T--------------------------A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 4 C 0
s Saguinus_bicolor.k141_2619299                               8161  5 -      8359 t--tg-------t--------------------------a
i Saguinus_bicolor.k141_2619299                          C 0 C 0
s Saguinus_imperator.k141_2524406                             2119  5 +      2197 T--TG-------T--------------------------a
i Saguinus_imperator.k141_2524406                        C 0 C 0
s Saguinus_inustus.k141_699149                               13538  5 +     13640 T--TC-------T--------------------------a
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               8407  5 +      8564 T--TG-------T--------------------------a
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469257  4 + 209938924 T--TG-------T---------------------------
i Saguinus_midas.LG03                                    C 0 I 1
s Saguinus_mystax.k141_374627                                 7963  4 -      9399 t--tc-------t---------------------------
i Saguinus_mystax.k141_374627                            I 3 I 1
s Saimiri_boliviensis.NW_024100920.1                     119950875  4 - 121099817 t--tg-------t---------------------------
i Saimiri_boliviensis.NW_024100920.1                     C 0 I 1
s Saimiri_cassiquiarensis.k141_2188234                       23331  4 +     46362 T--TG-------T---------------------------
i Saimiri_cassiquiarensis.k141_2188234                   C 0 I 1
s Saimiri_macrodon.k141_716185                               23426  4 +     45824 T--TG-------T---------------------------
i Saimiri_macrodon.k141_716185                           C 0 I 1
s Saimiri_oerstedii.k141_1487881                             40054  4 -     64574 t--tg-------t---------------------------
i Saimiri_oerstedii.k141_1487881                         C 0 I 1
s Saimiri_sciureus.k141_2278166                               3060  4 -     23631 t--tg-------t---------------------------
i Saimiri_sciureus.k141_2278166                          C 0 I 1
s Saimiri_ustus.k141_1484609                                 23322  5 -     61129 t--tg-------t--------------------------a
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420645  5 -   5703754 t--tg-------t--------------------------a
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          55686  4 -     80660 t--tg-------t---------------------------
i Sapajus_macrocephalus.k141_351809                      C 0 I 1
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153209 10 -    313613 T--TCTCC-TT-T--------------------------A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          19665  5 -     19888 T--TC-------T--------------------------A
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26868  4 +     39453 T--TC-------T---------------------------
i Semnopithecus_hypoleucos.k141_1615806                  C 0 I 1
s Semnopithecus_johnii.k141_670120                            7387  4 +     27826 T--TC-------T---------------------------
i Semnopithecus_johnii.k141_670120                       I 1 I 1
s Semnopithecus_priam.k141_638794                             6908  4 -     19483 t--tc-------t---------------------------
i Semnopithecus_priam.k141_638794                        C 0 I 1
s Semnopithecus_schistaceus.k141_1584426                      6976  5 +      7198 T--TC-------T--------------------------A
i Semnopithecus_schistaceus.k141_1584426                 C 0 C 0
s Semnopithecus_vetulus.k141_1200928                         15234  5 +     15514 T--TC-------T--------------------------a
i Semnopithecus_vetulus.k141_1200928                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               3769 10 +   1910179 T--TCTCC-TT-T--------------------------A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13651015 10 -  18376816 T--TCTCC-AT-T--------------------------G
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1953989  1 -   3870691 T---------------------------------------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 37
s Spilogale_gracilis.SpiGra_flattened_line_13525             30729 10 +     97271 C--TCTTCTC--T--------------------------A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              18316 10 -    196729 C--TTTCCTC--T--------------------------A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6810491 10 +  69701581 C--TCTCC-TT-T--------------------------A
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                10792 10 +     41958 T--GCTCC-TT-T--------------------------A
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 3 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72614 10 +    116680 C--TCTCCTC--T--------------------------A
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118746 10 -    156842 T--TCTCC-TT-C--------------------------A
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387203 10 +    539355 T--TCTCC-TT-C--------------------------A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               26525  1 +     70052 ---------------------------------------a
i Tarsius_lariang.k141_2201908                           I 104 T 105
s Tarsius_wallacei.k141_254427                                1322  1 -     16117 ---------------------------------------g
i Tarsius_wallacei.k141_254427                           I 68 T 69
s Theropithecus_gelada.CM009954.1                        186428565  4 + 186847797 t--tc-------t---------------------------
i Theropithecus_gelada.CM009954.1                        C 0 I 1
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105507  1 +    114563 T---------------------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 16
s Tolypeutes_matacus.TolMat_scaffold_228639                   6397 10 +      8208 G--TCTC-TGA-T--------------------------A
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81184 11 +    610378 T--CCTCCCCT-C--------------------------A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         10959  4 -     20410 t--tc-------t---------------------------
i Trachypithecus_auratus.k141_722599                     C 0 I 1
s Trachypithecus_crepusculus.k141_1194022                    15153  5 +     15221 T--TC-------T--------------------------a
i Trachypithecus_crepusculus.k141_1194022                I 15 n 5
s Trachypithecus_cristatus.k141_580354                       11060  4 +     19930 T--TC-------T---------------------------
i Trachypithecus_cristatus.k141_580354                   C 0 I 1
s Trachypithecus_francoisi.k141_1412647                       7487  4 -     19997 t--tc-------t---------------------------
i Trachypithecus_francoisi.k141_1412647                  C 0 I 1
s Trachypithecus_geei.k141_277701                            47611  4 -     60166 t--tc-------t---------------------------
i Trachypithecus_geei.k141_277701                        C 0 I 1
s Trachypithecus_germaini.k141_912491                        15082  4 -     27529 t--tc-------t---------------------------
i Trachypithecus_germaini.k141_912491                    C 0 I 1
s Trachypithecus_hatinhensis.k141_143409                     15026  4 -     18194 t--tc-------t---------------------------
i Trachypithecus_hatinhensis.k141_143409                 C 0 I 1
s Trachypithecus_laotum.k141_907409                           8754  4 -     21137 t--tc-------t---------------------------
i Trachypithecus_laotum.k141_907409                      C 0 I 1
s Trachypithecus_leucocephalus.k141_587342                    7457  4 -     10723 t--tc-------t---------------------------
i Trachypithecus_leucocephalus.k141_587342               C 0 I 1
s Trachypithecus_melamera.k141_434728                         6613  4 +      9834 T--TC-------T---------------------------
i Trachypithecus_melamera.k141_434728                    C 0 I 1
s Trachypithecus_obscurus.k141_190785                        24926  4 +     32220 T--TC-------T---------------------------
i Trachypithecus_obscurus.k141_190785                    C 0 I 1
s Trachypithecus_phayrei.ctg124                            5939028  4 +   6242583 T--TC-------T---------------------------
i Trachypithecus_phayrei.ctg124                          C 0 I 1
s Trachypithecus_pileatus.k141_2007326                        8280  4 +     20839 T--TC-------T---------------------------
i Trachypithecus_pileatus.k141_2007326                   C 0 I 1
s Trichechus_manatus.JH594705.1                            4293246 10 +  10818551 t--tCTGCTC--G--------------------------A
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   53314 10 -     77625 T--TCTCC-TT-A--------------------------A
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4850434 10 -   5085361 C--TCTCCTC--T--------------------------A
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  11461  5 +     50397 T--TC-------T--------------------------A
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11520  5 +     24756 T--TC-------T--------------------------A
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371872 10 -   5488506 G--TCTCC-TT-T--------------------------A
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10785 10 -     43706 C--TCTCCTC--T--------------------------A
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          1129  1 +    224448 T---------------------------------------
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 37
s Zalophus_californianus.ZalCal_flattened_line_17732          5358 10 +     86975 C--TCTCCTC--T--------------------------A
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Mus_pahari.LT608297.1                                   31355110  4 -  89631738 I
e Mus_spretus.CM004101.1                                  90752512  4 - 130317789 I
e Mus_musculus.chr8                                       87650451  4 - 129401213 I
e Mus_caroli.LT608237.1                                   84361453  4 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      14994  0 +     63895 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     9318  0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2155667  0 +   4065304 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Sigmodon_hispidus.SigHis_scaffold_42075                      411  4 -     30804 I
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570713  4 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Psammomys_obesus.NESX01036370.1                            10483  4 -     21651 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     28190 14 -     29689 I
e Peromyscus_maniculatus.KI615324.1                       18194865  4 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80239  4 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   25239  4 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Nannospalax_galili.KL204047.1                            2034163  2 -   3037898 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11260571  4 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182333  4 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 32827 16 +    140813 I
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276898  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Ellobius_talpinus.LOJH01081419.1                             523  4 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          20392  4 -    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cricetulus_griseus.LT883664.1                           11667658  4 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 50291  2 +     63868 I
e Colobus_guereza.LG01                                   199948958  0 + 200372422 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74597  0 -     89534 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     70877 18 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       6756  3 +     62944 a------------ag
s Acinonyx_jubatus.LLWD01001279.1                           827322  3 -   1699592 A------------AG
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510583  3 -  29979442 A------------AA
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             79353  3 -    347723 A------------AG
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14685  3 -     52922 a------------ag
i Allenopithecus_nigroviridis.k141_3361533               I 1 I 119
s Allochrocebus_lhoesti.k141_4309873                         14621  3 -     28001 a------------ag
i Allochrocebus_lhoesti.k141_4309873                     I 1 I 99
s Allochrocebus_preussi.k141_1442296                          5117  3 -     18505 a------------ag
i Allochrocebus_preussi.k141_1442296                     I 1 I 99
s Allochrocebus_solatus.k141_166128                           5971  3 -     12518 a------------ag
i Allochrocebus_solatus.k141_166128                      I 1 I 99
s Alouatta_belzebul.k141_3560514                              7437 15 +     51355 aagaagaaagagaaa
i Alouatta_belzebul.k141_3560514                         I 1 C 0
s Alouatta_caraya.k141_1701091                                 572  2 -     36483 -------------aa
i Alouatta_caraya.k141_1701091                           I 14 C 0
s Alouatta_discolor.k141_566626                              11194  2 +     28687 a------------a-
i Alouatta_discolor.k141_566626                          n 21 C 0
s Alouatta_juara.k141_1509701                                24828 15 +     25266 aagaagaaagagaaa
i Alouatta_juara.k141_1509701                            I 1 C 0
s Alouatta_macconnelli.k141_918386                             553 15 -      9457 aagaagaaagagaat
i Alouatta_macconnelli.k141_918386                       I 1 C 0
s Alouatta_nigerrima.k141_3472759                            18131 15 -     18578 aagaagaaagagaaa
i Alouatta_nigerrima.k141_3472759                        I 1 C 0
s Alouatta_palliata.k141_2135620                              3530  3 +     47717 A------------AG
i Alouatta_palliata.k141_2135620                         I 1 I 178
s Alouatta_puruensis.k141_362188                               227 15 +      5663 aagaagaaagagaaa
i Alouatta_puruensis.k141_362188                         I 1 C 0
s Alouatta_seniculus.k141_117119                             14847 15 +     50774 AAGAAGAAAGAGAAA
i Alouatta_seniculus.k141_117119                         T 26 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185348  3 +    412891 A------------AG
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  15472  3 -     33861 a------------ag
i Aotus_azarae.k141_3104676                              I 1 I 200
s Aotus_griseimembra.k141_2240599                            15492  3 -     34016 a------------ag
i Aotus_griseimembra.k141_2240599                        I 1 I 216
s Aotus_nancymaae.KZ198451.1                               4297889  3 -   5030052 a------------ag
i Aotus_nancymaae.KZ198451.1                             I 1 I 208
s Aotus_trivirgatus.k141_2152450                             15494  3 -     34685 a------------ag
i Aotus_trivirgatus.k141_2152450                         I 1 I 212
s Aotus_vociferans.k141_344750                               28618  3 -     47192 a------------ag
i Aotus_vociferans.k141_344750                           I 1 I 212
s Arctocebus_calabarensis.k141_2318572                       11540  3 +     14667 A------------AG
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4757  3 +     43469 A------------AG
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  53743  3 -     92717 A------------AG
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54370  3 +     85213 A------------AG
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             5227  3 -     10423 a------------ag
i Callibella_humilis.k141_1278103                        I 1 I 257
s Callimico_goeldii.k141_1091182                             24697  3 +     31915 a------------ag
i Callimico_goeldii.k141_1091182                         C 0 I 255
s Callithrix_geoffroyi.k119_512088                            5193  3 +      5267 a------------ag
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590407  3 - 189096842 a------------ag
i Callithrix_jacchus.pat_scaffold_3                      I 1 I 231
s Callithrix_kuhlii.k119_1164682                             11938  3 -     12001 A------------AG
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002379  3 -  17673402 A------------AG
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334837  3 -   7040546 A------------AG
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  403120  3 -   1652518 A------------AG
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17799172  3 -  60362399 A------------AG
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    185229  3 -    185531 A------------AG
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034615  3 -   9314153 A------------AG
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17958880  3 -  59632846 A------------AG
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18500392  3 +  63665305 A------------AG
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007247396.1                           201414  3 +    308752 a------------gg
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5115  3 -     11696 A------------AG
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     93009  3 +    217609 A------------AG
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          9852  3 -     11392 a------------ag
i Cebuella_niveiventris.k141_1251222                     I 1 I 267
s Cebuella_pygmaea.k141_1309012                               5950  3 -      7577 a------------ag
i Cebuella_pygmaea.k141_1309012                          I 1 I 237
s Cebus_albifrons.Contig27                                25651979  3 +  26074798 a------------ag
i Cebus_albifrons.Contig27                               I 1 I 866
s Cebus_olivaceus.k141_398305                                 1555  3 +      1777 T------------AG
i Cebus_olivaceus.k141_398305                            C 0 C 0
s Cebus_unicolor.k141_544048                                 49892  3 -     74725 a------------ag
i Cebus_unicolor.k141_544048                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         5419  3 +     31688 a------------gg
i Cephalopachus_bancanus.k141_1423433                    T 115 C 0
s Ceratotherium_simum.JH767749.1                          12231437  3 +  27778364 A------------AA
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2464  3 -     25243 A------------AA
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4475630  3 +   4669795 a------------ag
i Cercocebus_atys.KQ010504.1                             I 1 I 99
s Cercocebus_chrysogaster.k141_393940                        14175  3 -     19203 a------------ag
i Cercocebus_chrysogaster.k141_393940                    I 1 C 0
s Cercocebus_lunulatus.k141_3342297                            791  3 -     14043 a------------ag
i Cercocebus_lunulatus.k141_3342297                      I 1 I 99
s Cercocebus_torquatus.k141_3057011                           8827  3 +     27781 a------------ag
i Cercocebus_torquatus.k141_3057011                      I 1 I 96
s Cercopithecus_ascanius.k141_1024104                         8992  3 -     20310 a------------ag
i Cercopithecus_ascanius.k141_1024104                    I 1 I 99
s Cercopithecus_cephus.k141_1078548                          11971  3 +     29689 a------------ag
i Cercopithecus_cephus.k141_1078548                      I 1 I 100
s Cercopithecus_diana.k141_1150327                            6725  3 -     20078 a------------ag
i Cercopithecus_diana.k141_1150327                       I 1 I 99
s Cercopithecus_hamlyni.k141_187466                          14648  3 -     27936 a------------ag
i Cercopithecus_hamlyni.k141_187466                      I 1 I 99
s Cercopithecus_lowei.k141_1854285                            3512  3 -     17152 a------------ag
i Cercopithecus_lowei.k141_1854285                       I 1 I 99
s Cercopithecus_albogularis.ctg5                                38817051  3 +  39242232 a------------ag
i Cercopithecus_albogularis.ctg5                               I 1 I 99
s Cercopithecus_mona.ctg39                                21222743  3 -  21565898 a------------ag
i Cercopithecus_mona.ctg39                               I 1 I 99
s Cercopithecus_neglectus.k141_2526306                       39861  3 -     53127 a------------ag
i Cercopithecus_neglectus.k141_2526306                   I 1 I 99
s Cercopithecus_nictitans.k141_1119848                         112  3 +     27489 a------------ag
i Cercopithecus_nictitans.k141_1119848                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14661  3 -     27947 a------------ag
i Cercopithecus_petaurista.k141_807961                   I 1 I 99
s Cercopithecus_pogonias.k141_822820                         14637  3 +     17596 a------------ag
i Cercopithecus_pogonias.k141_822820                     I 1 I 99
s Cercopithecus_roloway.k141_2581234                           684  3 +     14005 a------------ag
i Cercopithecus_roloway.k141_2581234                     I 1 I 99
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             534  3 -      8501 A------------AG
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             21124  3 -     52598 A------------AG
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16489  3 +     57038 A------------AG
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                          11104  3 +     11226 A------------AG
i Chiropotes_albinasus.k141_2813271                      C 0 I 3
s Chlorocebus_aethiops.ctg25                              18428621  3 -  18827391 a------------ag
i Chlorocebus_aethiops.ctg25                             I 1 I 99
s Chlorocebus_pygerythrus.k141_1025673                       15058  3 -     50209 a------------ag
i Chlorocebus_pygerythrus.k141_1025673                   I 1 I 99
s Chlorocebus_sabaeus.CM001947.1                         135422058  3 + 135778131 a------------ag
i Chlorocebus_sabaeus.CM001947.1                         I 1 I 99
s Choloepus_didactylus.ChoDid_scaffold_45914                 18312  3 +     19366 A------------AG
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            173388  3 +    839153 A------------AG
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1910563  3 +   2368649 a------------ag
i Colobus_angolensis.KN981557.1                          I 1 I 103
s Colobus_polykomos.k141_906115                              37101  3 +     84244 a------------ag
i Colobus_polykomos.k141_906115                          I 1 I 99
s Condylura_cristata.JH655891.1                           17548104  3 -  53390261 A------------GG
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14404  3 -     20389 A------------AG
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               2995  3 -     19598 A------------GG
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28493  3 -     87169 A------------AG
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            63541  3 +   2246927 A------------AG
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537341  3 -  12879189 A------------AG
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630128  3 +  20541912 A------------AG
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673288  3 +   1390856 A------------AA
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6040  3 +    198055 A------------AA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Echinops_telfairi.JH980293.1                            48780401  3 + 111700974 A------------AA
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.KE759718.1                                  10529  3 +     11740 A------------AG
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Enhydra_lutris.KZ291758.1                               16329311  3 -  41312741 A------------AG
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2145720  3 -  14770903 A------------AG
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1283546  3 +   4378816 A------------AA
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18531367  3 -  39960074 A------------AA
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               33395  3 +    498745 A------------AA
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3328244  3 -   7059049 A------------AG
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21205228  3 -  21539334 a------------ag
i Erythrocebus_patas.Contig38                            I 1 I 99
s Eulemur_albifrons.k141_342033                              13846  3 -     14127 A------------AG
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6549  3 -     16928 A------------AG
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15573  3 -     25546 A------------AG
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12777  3 +     26330 A------------AG
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14012  3 +     23973 A------------AG
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12774  3 +     75513 A------------AG
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10704  3 +     97555 A------------AG
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              195  3 +     13026 A------------AG
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4248  3 -     17153 A------------AG
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13821  3 +    111500 A------------AG
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20236973  3 + 206538554 A------------AG
i Felis_catus.CM001381.2                                 I 10 C 0
s Felis_catus_fca126.CM031415.1                           20195816  3 + 205367284 A------------AG
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  9560  3 -     36744 A------------AG
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     426674  3 -    453645 A------------AG
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4365  3 +     11339 A------------AG
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            1678  3 +     41679 A------------AG
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1224  3 -      9135 a------------ag
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              16011  3 -     32273 a------------ag
i Gorilla_beringei.k141_3596273                          I 1 I 117
s Gorilla_gorilla.LT578341.1                             186338157  3 + 186649187 a------------ag
i Gorilla_gorilla.LT578341.1                             I 1 I 108
s Hapalemur_alaotrensis.k141_170648                           6885  3 -     19426 A------------AG
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12034  3 -     15286 A------------AG
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13673  3 +     18253 A------------AG
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13774  3 -     41752 A------------AG
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13611  3 -     16460 A------------AG
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242326  3 +    327341 A------------AG
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                 902  3 +      7595 A------------AG
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hoolock_leuconedys.ctg274                                    434823  3 +    630532 a------------ag
i Hoolock_leuconedys.ctg274                                 I 1 I 110
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45020  3 +     55795 A------------AG
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Indri_indri.k141_3655594                                   22564  3 +     31101 A------------AG
i Indri_indri.k141_3655594                               C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    14136  3 -     42476 A------------AG
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15524126  3 -  30322482 A------------AG
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7489  3 +     64341 a------------ag
i Leontocebus_fuscicollis.k141_1820339                   I 1 I 270
s Leontocebus_illigeri.k141_3350179                           4812  3 +      4941 A------------AG
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        7530  3 +     35603 a------------ag
i Leontocebus_nigricollis.k141_4610752                   I 1 I 257
s Leontopithecus_chrysomelas.k141_1519602                    28991  3 +     38576 a------------ag
i Leontopithecus_chrysomelas.k141_1519602                I 1 I 216
s Leontopithecus_rosalia.k141_464620                         25688  3 +     66356 a------------ag
i Leontopithecus_rosalia.k141_464620                     I 1 I 219
s Lepilemur_ankaranensis.k141_596936                         11020  3 -     23766 A------------AG
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29081  3 +     45836 A------------AG
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1621  3 +     25010 A------------AG
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27017  3 +     54090 A------------AG
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3042848  3 +   3914936 A------------AG
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6496  3 -     14121 a------------gg
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437177  3 +   1826925 a------------ag
i Lophocebus_aterrimus.ctg367                            I 1 I 97
s Loris_lydekkerianus.k141_2539221                            5922  3 +     11245 A------------AG
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004742  3 +   6120653 A------------AG
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4217330  3 -  43346337 A------------AG
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17955120  3 -  59628241 A------------AG
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               6987  3 +     40492 A------------AG
i Macaca_arctoides.k141_2326796                          I 1 C 0
s Macaca_assamensis.Contig5                               59676246  3 +  60120075 A------------AG
i Macaca_assamensis.Contig5                              I 1 C 0
s Macaca_cyclopis.k119_18836                                 12759  3 -     26193 a------------ag
i Macaca_cyclopis.k119_18836                             I 1 C 0
s Macaca_fascicularis.k141_814140                            80543  3 -    114318 a------------ag
i Macaca_fascicularis.k141_814140                        I 1 C 0
s Macaca_fuscata.k119_255327                                  6234  3 -     23192 a------------ag
i Macaca_fuscata.k119_255327                             I 1 C 0
s Macaca_leonina.k141_3550399                                15703  3 -     29190 a------------ag
i Macaca_leonina.k141_3550399                            I 1 C 0
s Macaca_maura.k141_2733130                                  24268  3 +     37952 A------------AG
i Macaca_maura.k141_2733130                              I 1 C 0
s Macaca_mulatta.NC_041758.1                             186839357  3 + 187317192 a------------ag
i Macaca_mulatta.NC_041758.1                             I 1 C 0
s Macaca_nemestrina.KQ007038.1                            25457920  3 -  25927173 a------------ag
i Macaca_nemestrina.KQ007038.1                           I 1 C 0
s Macaca_nigra.k141_1655396                                  80116  3 +     89720 A------------AG
i Macaca_nigra.k141_1655396                              I 1 C 0
s Macaca_radiata.k141_3680011                                 7117  3 +     20474 A------------AG
i Macaca_radiata.k141_3680011                            I 1 C 0
s Macaca_siberu.k141_635500                                   6917  3 -     14993 a------------ag
i Macaca_siberu.k141_635500                              I 1 C 0
s Macaca_silenus.Contig273                                  329783  3 -    668171 a------------ag
i Macaca_silenus.Contig273                               I 1 C 0
s Macaca_thibetana.k99_256239                                 5233  3 -     24072 a------------ag
i Macaca_thibetana.k99_256239                            I 1 C 0
s Macaca_tonkeana.k141_1498238                               25855  3 -     45290 a------------ag
i Macaca_tonkeana.k141_1498238                           I 1 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90620  3 +     94391 A------------AG
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23937450  3 -  24302211 a------------ag
i Mandrillus_leucophaeus.scaffold280                     I 1 I 99
s Mandrillus_sphinx.Contig270                               351578  3 +    752769 a------------ag
i Mandrillus_sphinx.Contig270                            I 1 I 95
s Manis_javanica.JSZB01003497.1                              18498  3 +    737560 A------------AG
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              50487  3 -    317179 A------------AG
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        10339  3 -    207569 A------------AG
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10048  3 +     13704 A------------AG
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mico_argentatus.k141_1239457                                5767  3 -      7380 a------------ag
i Mico_argentatus.k141_1239457                           I 1 I 231
s Mico_humeralifer.k141_1976199                               4840  3 +     18990 a------------ag
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      5779  3 -      7356 a------------ag
i Mico_schneideri.k141_1950671                                 I 1 I 231
s Microcebus_murinus.CM007674.1                           18291546  3 -  93316391 a------------ag
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    22148  3 -    145209 A------------AA
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                15654  3 -     19307 A------------AG
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850621  3 +   8254450 A------------AG
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34302  3 +     64694 A------------AG
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9175  3 -     28506 a------------ag
i Miopithecus_ogouensis.k141_534055                      I 1 I 83
s Mirounga_angustirostris.MirAng_flattened_line_93702         5716  3 -      8324 A------------AG
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      9091  3 -     37649 A------------AG
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141620  3 -    366855 A------------AG
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35425  3 +     37127 A------------AG
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           6817  3 +     14753 A------------AG
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mustela_putorius.JH418006.1                               301239  3 -  14710649 A------------AG
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                280460  3 -  10118263 A------------AG
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1587724  1 -   6019432 --------------G
i Myotis_davidii.KB100139.1                              I 3 C 0
s Myotis_lucifugus.GL429869.1                              3903814  3 -   4330536 A------------AG
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_482318                         488  3 -       721 A------------AG
i Myotis_myotis.MyoMyo_scaffold_482318                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189263  3 +    196477 A------------AG
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nasalis_larvatus.k141_413338                               15150  3 +     21681 a------------ag
i Nasalis_larvatus.k141_413338                           I 1 I 107
s Neomonachus_schauinslandi.NINY01007730.1                20306970  3 +  31847680 A------------AG
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149382  3 -   9404916 A------------AG
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102586287  3 - 196305487 A------------AG
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              211  3 +      2075 A------------AG
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761641  3 + 199412804 A------------AG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1363519  3 +   3988456 a------------ca
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              506655  3 -   2017862 A------------AG
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9848  3 -     18566 A------------AG
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147377  3 + 174332312 a------------gg
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462350  3 -    559221 A------------AG
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4206  3 +      8798 A------------AG
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696369  3 -   1103335 A------------AG
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    44104  3 +     80009 a------------ag
i Pan_paniscus.KQ411613.1                                I 1 I 113
s Pan_troglodytes.NBAG03001836.1                             30029  3 +     51860 a------------ag
i Pan_troglodytes.NBAG03001836.1                         I 1 I 3
s Panthera_onca.PanOnc_flattened_line_3271                  151175  3 +    230217 A------------AG
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                264384  3 +  18783137 A------------AG
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4721263  3 -   8748460 A------------AG
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183443200  3 + 183742232 a------------ag
i Papio_anubis.CM001495.2                                I 1 I 151
s Papio_cynocephalus.k141_4307930                             6898  3 +     20448 a------------ag
i Papio_cynocephalus.k141_4307930                        I 1 I 99
s Papio_hamadryas.Contig39                                20563706  3 +  20919399 a------------ag
i Papio_hamadryas.Contig39                               I 1 I 103
s Papio_kindae.k141_1936966                                   5642  3 +     41871 a------------ag
i Papio_kindae.k141_1936966                              I 1 I 99
s Papio_papio.k141_802527                                     8927  3 +     27711 a------------ag
i Papio_papio.k141_802527                                I 1 I 107
s Papio_ursinus.k141_3428135                                  9008  3 +      9205 a------------ag
i Papio_ursinus.k141_3428135                             I 1 I 95
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12657  3 -     78924 A------------AG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10176  3 +     13100 A------------AG
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8582  3 +     25941 A------------AG
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Piliocolobus_badius.k141_1234363                           43661  3 +     62158 a------------ag
i Piliocolobus_badius.k141_1234363                       I 1 I 87
s Piliocolobus_gordonorum.k141_381342                        38392  3 +     89929 a------------ag
i Piliocolobus_gordonorum.k141_381342                    I 1 I 103
s Piliocolobus_kirkii.k141_448987                            39808  3 +     51399 a------------ag
i Piliocolobus_kirkii.k141_448987                        I 1 I 103
s Piliocolobus_tephrosceles.PDMG02000141.1                14296046  3 -  14605196 a------------ag
i Piliocolobus_tephrosceles.PDMG02000141.1               I 1 I 103
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1764  3 +     22620 A------------AG
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 23
s Pongo_abelii.CM009266.2                                189131146  3 + 189387572 a------------ag
i Pongo_abelii.CM009266.2                                I 1 I 109
s Pongo_pygmaeus.ctg66                                     9570754  3 +   9816681 a------------ag
i Pongo_pygmaeus.ctg66                                   I 1 I 108
s Presbytis_comata.k141_677006                               73330  3 -     81375 a------------ag
i Presbytis_comata.k141_677006                           I 1 I 103
s Presbytis_mitrata.k141_1087752                              5150  3 +     19060 A------------AG
i Presbytis_mitrata.k141_1087752                         I 1 I 103
s Procavia_capensis.ProCapCap_scaffold_85530                 13357  3 -     22811 A------------AG
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2596806  3 -   4620579 A------------AG
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990787  3 +   2598838 A------------AG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29099  3 +     38485 A------------AG
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1142  3 -     13098 A------------AG
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26620  3 +     35766 A------------AG
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4807  3 -     24134 A------------AG
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28632  3 -     67325 A------------AG
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4855  3 -      6182 A------------AG
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            15073  3 -     21811 A------------AG
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40238  3 +     42204 A------------AG
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22976788  3 +  28871421 A------------AG
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                6841  3 -      8028 A------------AG
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20274329  3 -  38429054 A------------AG
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15159  3 -     91421 a------------ag
i Pygathrix_cinerea.k141_1153803                         I 1 I 107
s Pygathrix_nigripes_b.ctg100                                 7609279  3 +   7812017 a------------ag
i Pygathrix_nigripes_b.ctg100                               I 1 I 107
s Pygathrix_nigripes_a.k141_215492                             15131  3 -     72585 a------------ag
i Pygathrix_nigripes_a.k141_215492                         I 1 I 107
s Rhinopithecus_bieti.k119_217274                             6845  3 -     11128 a------------ag
i Rhinopithecus_bieti.k119_217274                        I 1 I 106
s Rhinopithecus_roxellana.NC_044550.1                     91236198  3 - 195417433 a------------ag
i Rhinopithecus_roxellana.NC_044550.1                    I 1 I 100
s Rhinopithecus_strykeri.ctg102                            7671850  3 +   7961872 a------------ag
i Rhinopithecus_strykeri.ctg102                          I 1 I 106
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87809  3 -     96226 A------------AG
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               8166  3 -      8359 a------------ag
i Saguinus_bicolor.k141_2619299                          C 0 I 3
s Saguinus_imperator.k141_2524406                             2124  3 +      2197 a------------ag
i Saguinus_imperator.k141_2524406                        C 0 C 0
s Saguinus_inustus.k141_699149                               13543  3 +     13640 a------------ag
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               8412  3 +      8564 a------------ag
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469262  3 + 209938924 a------------ag
i Saguinus_midas.LG03                                    I 1 I 464
s Saguinus_mystax.k141_374627                                 7968  3 -      9399 a------------ag
i Saguinus_mystax.k141_374627                            I 1 I 393
s Saimiri_boliviensis.NW_024100920.1                     119950880  3 - 121099817 a------------ag
i Saimiri_boliviensis.NW_024100920.1                     I 1 I 223
s Saimiri_cassiquiarensis.k141_2188234                       23336  3 +     46362 a------------ag
i Saimiri_cassiquiarensis.k141_2188234                   I 1 I 106
s Saimiri_macrodon.k141_716185                               23431  3 +     45824 a------------ag
i Saimiri_macrodon.k141_716185                           I 1 I 106
s Saimiri_oerstedii.k141_1487881                             40059  3 -     64574 a------------ag
i Saimiri_oerstedii.k141_1487881                         I 1 I 157
s Saimiri_sciureus.k141_2278166                               3065  3 -     23631 a------------ag
i Saimiri_sciureus.k141_2278166                          I 1 I 223
s Saimiri_ustus.k141_1484609                                 23327  3 -     61129 a------------ag
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420650  3 -   5703754 a------------ag
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          55691  3 -     80660 a------------ag
i Sapajus_macrocephalus.k141_351809                      I 1 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153219  3 -    313613 A------------GG
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          19670  3 -     19888 A------------AG
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26873  3 +     39453 a------------ag
i Semnopithecus_hypoleucos.k141_1615806                  I 1 I 107
s Semnopithecus_johnii.k141_670120                            7392  3 +     27826 a------------ag
i Semnopithecus_johnii.k141_670120                       I 1 I 106
s Semnopithecus_priam.k141_638794                             6913  3 -     19483 a------------ag
i Semnopithecus_priam.k141_638794                        I 1 I 107
s Semnopithecus_schistaceus.k141_1584426                      6981  3 +      7198 A------------AG
i Semnopithecus_schistaceus.k141_1584426                 C 0 I 3
s Semnopithecus_vetulus.k141_1200928                         15239  3 +     15514 a------------ag
i Semnopithecus_vetulus.k141_1200928                     C 0 I 3
s Solenodon_paradoxus.SolPar_flattened_line_126               3779  3 +   1910179 A------------AG
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13651025  3 -  18376816 G------------GG
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30739  3 +     97271 A------------AG
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              18326  3 -    196729 A------------AG
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6810501  3 +  69701581 A------------AG
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                10802  3 +     41958 A------------AG
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72624  3 +    116680 A------------AG
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118756  3 -    156842 A------------AA
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387213  3 +    539355 A------------AG
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               26421  3 +     70052 a------------gg
i Tarsius_lariang.k141_2201908                           T 105 C 0
s Tarsius_wallacei.k141_254427                                1254  3 -     16117 a------------gg
i Tarsius_wallacei.k141_254427                           T 69 C 0
s Theropithecus_gelada.CM009954.1                        186428570  3 + 186847797 a------------ag
i Theropithecus_gelada.CM009954.1                        I 1 I 99
s Tolypeutes_matacus.TolMat_scaffold_228639                   6407  3 +      8208 A------------AG
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81195  3 +    610378 A------------AG
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         10964  3 -     20410 a------------ag
i Trachypithecus_auratus.k141_722599                     I 1 I 107
s Trachypithecus_crepusculus.k141_582567                        78  3 -     12674 a------------ag
i Trachypithecus_crepusculus.k141_582567                 I 5 I 107
s Trachypithecus_cristatus.k141_580354                       11065  3 +     19930 a------------ag
i Trachypithecus_cristatus.k141_580354                   I 1 I 107
s Trachypithecus_francoisi.k141_1412647                       7492  3 -     19997 a------------ag
i Trachypithecus_francoisi.k141_1412647                  I 1 I 91
s Trachypithecus_geei.k141_277701                            47616  3 -     60166 a------------ag
i Trachypithecus_geei.k141_277701                        I 1 I 106
s Trachypithecus_germaini.k141_912491                        15087  3 -     27529 a------------ag
i Trachypithecus_germaini.k141_912491                    I 1 I 107
s Trachypithecus_hatinhensis.k141_143409                     15031  3 -     18194 a------------ag
i Trachypithecus_hatinhensis.k141_143409                 I 1 I 107
s Trachypithecus_laotum.k141_907409                           8759  3 -     21137 a------------ag
i Trachypithecus_laotum.k141_907409                      I 1 I 91
s Trachypithecus_leucocephalus.k141_587342                    7462  3 -     10723 a------------ag
i Trachypithecus_leucocephalus.k141_587342               I 1 I 91
s Trachypithecus_melamera.k141_434728                         6618  3 +      9834 a------------ag
i Trachypithecus_melamera.k141_434728                    I 1 I 107
s Trachypithecus_obscurus.k141_190785                        24931  3 +     32220 a------------ag
i Trachypithecus_obscurus.k141_190785                    I 1 I 107
s Trachypithecus_phayrei.ctg124                            5939033  3 +   6242583 a------------ag
i Trachypithecus_phayrei.ctg124                          I 1 I 107
s Trachypithecus_pileatus.k141_2007326                        8285  3 +     20839 a------------ag
i Trachypithecus_pileatus.k141_2007326                   I 1 I 106
s Trichechus_manatus.JH594705.1                            4293256  3 +  10818551 A------------AG
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   53324  3 -     77625 A------------GG
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4850444  3 -   5085361 A------------AA
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  11466  3 +     50397 A------------AG
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11525  3 +     24756 A------------AG
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371882  3 -   5488506 A------------AG
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10795  3 -     43706 A------------AG
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          5368  3 +     86975 A------------AG
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Mus_pahari.LT608297.1                                   31355110  4 -  89631738 I
e Mus_spretus.CM004101.1                                  90752512  4 - 130317789 I
e Mus_musculus.chr8                                       87650451  4 - 129401213 I
e Mus_caroli.LT608237.1                                   84361453  4 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      14994  0 +     63895 C
e Xerus_inauris.XerIna_scaffold_2302                          1130 37 +    224448 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     9318  0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2155667  0 +   4065304 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              105508 16 +    114563 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spermophilus_dauricus.KZ294078.1                         1953990 37 -   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_42075                      411  4 -     30804 I
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570713  4 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Psammomys_obesus.NESX01036370.1                            10483  4 -     21651 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     28190 14 -     29689 I
e Peromyscus_maniculatus.KI615324.1                       18194865  4 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80239  4 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   25239  4 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746917 16 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Nannospalax_galili.KL204047.1                            2034163  2 -   3037898 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     71307 16 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11260571  4 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182333  4 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 32827 16 +    140813 I
e Marmota_marmota.CZRN01000018.1                          33103135 37 -  40650429 I
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276898  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Ictidomys_tridecemlineatus.JH393364.1                    7520939 33 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      83174 17 +    135385 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20662285 17 +  22651954 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             850497 16 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Ellobius_talpinus.LOJH01081419.1                             523  4 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          20392  4 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1097713  2 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    36463 16 +     67921 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35828 16 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    837151  8 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11667658  4 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 50291  2 +     63868 I
e Colobus_guereza.LG01                                   199948958  0 + 200372422 C
e Chinchilla_lanigera.JH722012.1                           1252870 15 +   2543920 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Castor_canadensis.CasCan_scaffold_2074                    137145  9 +    179628 I
e Capromys_pilorides.CapPil_scaffold_65020                    1121 16 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      12672 27 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74597  0 -     89534 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     70877 18 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       6759 3 +     62944 a-ag
s Acinonyx_jubatus.LLWD01001279.1                           827325 2 -   1699592 T-A-
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510586 2 -  29979442 T-A-
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             79356 2 -    347723 T-A-
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14807 3 -     52922 a-aa
i Allenopithecus_nigroviridis.k141_3361533               I 119 T 119
s Allochrocebus_lhoesti.k141_4309873                         14723 3 -     28001 a-ga
i Allochrocebus_lhoesti.k141_4309873                     I 99 T 99
s Allochrocebus_preussi.k141_1442296                          5219 3 -     18505 a-ga
i Allochrocebus_preussi.k141_1442296                     I 99 T 99
s Allochrocebus_solatus.k141_166128                           6073 3 -     12518 a-ga
i Allochrocebus_solatus.k141_166128                      I 99 T 99
s Alouatta_belzebul.k141_3560514                              7452 3 +     51355 a-aa
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                 574 3 -     36483 a-aa
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              11196 3 +     28687 a-ga
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1509701                                24843 3 +     25266 a-aa
i Alouatta_juara.k141_1509701                            C 0 I 177
s Alouatta_macconnelli.k141_918386                             568 3 -      9457 a-aa
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_3472759                            18146 3 -     18578 a-aa
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              3711 3 +     47717 a-ga
i Alouatta_palliata.k141_2135620                         I 178 T 178
s Alouatta_puruensis.k141_362188                               242 3 +      5663 a-aa
i Alouatta_puruensis.k141_362188                         C 0 I 181
s Alouatta_seniculus.k141_117119                             14862 3 +     50774 A-AA
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185351 2 +    412891 T-A-
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  15675 3 -     33861 a-ga
i Aotus_azarae.k141_3104676                              I 200 T 200
s Aotus_griseimembra.k141_2240599                            15711 3 -     34016 a-ga
i Aotus_griseimembra.k141_2240599                        I 216 T 216
s Aotus_nancymaae.KZ198451.1                               4298100 3 -   5030052 a-ga
i Aotus_nancymaae.KZ198451.1                             I 208 T 208
s Aotus_trivirgatus.k141_2152450                             15709 3 -     34685 a-ga
i Aotus_trivirgatus.k141_2152450                         I 212 T 212
s Aotus_vociferans.k141_344750                               28833 3 -     47192 a-ga
i Aotus_vociferans.k141_344750                           I 212 T 212
s Arctocebus_calabarensis.k141_2318572                       11543 2 +     14667 A-A-
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4760 2 +     43469 T-A-
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  53746 2 -     92717 A-A-
i Avahi_laniger.k141_765380                              C 0 I 1
s Avahi_peyrierasi.k141_1424874                              54373 2 +     85213 A-A-
i Avahi_peyrierasi.k141_1424874                          C 0 I 1
s Callibella_humilis.k141_1278103                             5487 3 -     10423 a-ga
i Callibella_humilis.k141_1278103                        I 257 T 257
s Callimico_goeldii.k141_1091182                             24955 3 +     31915 a-ga
i Callimico_goeldii.k141_1091182                         I 255 T 255
s Callithrix_geoffroyi.k119_512088                            5196 3 +      5267 a-ag
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590641 3 - 189096842 a-ga
i Callithrix_jacchus.pat_scaffold_3                      I 231 T 231
s Callithrix_kuhlii.k119_1164682                             11941 3 -     12001 A-AG
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002382 2 -  17673402 T-A-
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334840 2 -   7040546 T-A-
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  403123 2 -   1652518 T-A-
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17799175 2 -  60362399 T-A-
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    185232 2 -    185531 T-A-
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034618 2 -   9314153 T-A-
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17958883 2 -  59632846 T-A-
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18500395 2 +  63665305 T-A-
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007247396.1                           201417 3 +    308752 a-ag
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5118 2 -     11696 T-A-
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     93012 2 +    217609 C-A-
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                         10122 3 -     11392 a-ga
i Cebuella_niveiventris.k141_1251222                     I 267 T 267
s Cebuella_pygmaea.k141_1309012                               6190 3 -      7577 a-ga
i Cebuella_pygmaea.k141_1309012                          I 237 T 237
s Cebus_albifrons.Contig27                                25652848 3 +  26074798 a-aa
i Cebus_albifrons.Contig27                               I 866 T 866
s Cebus_olivaceus.k141_398305                                 1558 3 +      1777 A-AA
i Cebus_olivaceus.k141_398305                            C 0 C 0
s Cebus_unicolor.k141_544048                                 49895 3 -     74725 a-aa
i Cebus_unicolor.k141_544048                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         5422 3 +     31688 a-ag
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12231440 2 +  27778364 T-A-
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2467 2 -     25243 T-A-
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4475732 3 +   4669795 a-ga
i Cercocebus_atys.KQ010504.1                             I 99 T 99
s Cercocebus_chrysogaster.k141_393940                        14178 3 -     19203 a-ag
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3342297                            893 3 -     14043 a-ga
i Cercocebus_lunulatus.k141_3342297                      I 99 T 99
s Cercocebus_torquatus.k141_3057011                           8926 3 +     27781 a-ga
i Cercocebus_torquatus.k141_3057011                      I 96 T 96
s Cercopithecus_ascanius.k141_1024104                         9094 3 -     20310 a-ga
i Cercopithecus_ascanius.k141_1024104                    I 99 T 99
s Cercopithecus_cephus.k141_1078548                          12074 3 +     29689 a-ga
i Cercopithecus_cephus.k141_1078548                      I 100 T 100
s Cercopithecus_diana.k141_1150327                            6827 3 -     20078 a-ga
i Cercopithecus_diana.k141_1150327                       I 99 T 99
s Cercopithecus_hamlyni.k141_187466                          14750 3 -     27936 a-ga
i Cercopithecus_hamlyni.k141_187466                      I 99 T 99
s Cercopithecus_lowei.k141_1854285                            3614 3 -     17152 a-ga
i Cercopithecus_lowei.k141_1854285                       I 99 T 99
s Cercopithecus_albogularis.ctg5                                38817153 3 +  39242232 a-ga
i Cercopithecus_albogularis.ctg5                               I 99 T 99
s Cercopithecus_mona.ctg39                                21222845 3 -  21565898 a-ga
i Cercopithecus_mona.ctg39                               I 99 T 99
s Cercopithecus_neglectus.k141_2526306                       39963 3 -     53127 a-ga
i Cercopithecus_neglectus.k141_2526306                   I 99 T 99
s Cercopithecus_nictitans.k141_1119848                         115 3 +     27489 a-ag
i Cercopithecus_nictitans.k141_1119848                   C 0 T 27
s Cercopithecus_petaurista.k141_807961                       14763 3 -     27947 a-ga
i Cercopithecus_petaurista.k141_807961                   I 99 T 99
s Cercopithecus_pogonias.k141_822820                         14739 3 +     17596 a-ga
i Cercopithecus_pogonias.k141_822820                     I 99 T 99
s Cercopithecus_roloway.k141_2581234                           786 3 +     14005 a-ga
i Cercopithecus_roloway.k141_2581234                     I 99 T 99
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             537 2 -      8501 T-A-
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             21127 2 -     52598 A-A-
i Cheirogaleus_major.k141_333249                         C 0 I 1
s Cheirogaleus_medius.k141_1055463                           16492 2 +     57038 A-A-
i Cheirogaleus_medius.k141_1055463                       C 0 I 1
s Chiropotes_albinasus.k141_2206961                            384 3 -     15524 a-ga
i Chiropotes_albinasus.k141_2206961                      I 365 I 8
s Chlorocebus_aethiops.ctg25                              18428723 3 -  18827391 a-ga
i Chlorocebus_aethiops.ctg25                             I 99 T 99
s Chlorocebus_pygerythrus.k141_1025673                       15160 3 -     50209 a-ga
i Chlorocebus_pygerythrus.k141_1025673                   I 99 T 99
s Chlorocebus_sabaeus.CM001947.1                         135422160 3 + 135778131 a-ga
i Chlorocebus_sabaeus.CM001947.1                         I 99 T 99
s Choloepus_didactylus.ChoDid_scaffold_45914                 18315 2 +     19366 T-A-
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            173391 2 +    839153 T-A-
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1910669 3 +   2368649 a-ga
i Colobus_angolensis.KN981557.1                          I 103 T 103
s Colobus_polykomos.k141_906115                              37203 3 +     84244 a-ga
i Colobus_polykomos.k141_906115                          I 99 T 102
s Condylura_cristata.JH655891.1                           17548107 2 -  53390261 T-A-
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14407 2 -     20389 T-A-
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               2998 2 -     19598 T-A-
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28496 2 -     87169 T-A-
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            63544 2 +   2246927 T-A-
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537344 2 -  12879189 A-A-
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630131 2 +  20541912 T-A-
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673291 2 +   1390856 T-A-
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6043 2 +    198055 T-A-
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Echinops_telfairi.JH980293.1                            48780404 2 + 111700974 T-A-
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.KE759718.1                                  10532 2 +     11740 T-A-
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Enhydra_lutris.KZ291758.1                               16329314 2 -  41312741 A-A-
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2145723 2 -  14770903 T-A-
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1283549 2 +   4378816 T-A-
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18531370 2 -  39960074 T-A-
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               33398 2 +    498745 T-A-
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3328247 2 -   7059049 T-A-
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21205330 3 -  21539334 a-ga
i Erythrocebus_patas.Contig38                            I 99 T 99
s Eulemur_albifrons.k141_342033                              13849 2 -     14127 A-A-
i Eulemur_albifrons.k141_342033                          C 0 I 1
s Eulemur_collaris.k141_377015                                6552 2 -     16928 A-A-
i Eulemur_collaris.k141_377015                           C 0 I 1
s Eulemur_coronatus.k141_885031                              15576 2 -     25546 A-A-
i Eulemur_coronatus.k141_885031                          C 0 I 1
s Eulemur_flavifrons.k141_1184614                            12780 2 +     26330 A-A-
i Eulemur_flavifrons.k141_1184614                        C 0 I 1
s Eulemur_fulvus.k141_544389                                 14015 2 +     23973 A-A-
i Eulemur_fulvus.k141_544389                             C 0 I 1
s Eulemur_macaco.k141_1562045                                12777 2 +     75513 A-A-
i Eulemur_macaco.k141_1562045                            C 0 I 1
s Eulemur_mongoz.k141_232305                                 10707 2 +     97555 A-A-
i Eulemur_mongoz.k141_232305                             C 0 I 1
s Eulemur_rubriventer.k141_774594                              198 2 +     13026 A-A-
i Eulemur_rubriventer.k141_774594                        C 0 I 1
s Eulemur_rufus.k141_1476633                                  4251 2 -     17153 A-A-
i Eulemur_rufus.k141_1476633                             C 0 I 1
s Eulemur_sanfordi.k141_1122526                              13824 2 +    111500 A-A-
i Eulemur_sanfordi.k141_1122526                          C 0 I 1
s Felis_catus.CM001381.2                                  20236976 2 + 206538554 T-A-
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195819 2 + 205367284 T-A-
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  9563 2 -     36744 T-A-
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     426677 2 -    453645 A-A-
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4368 2 +     11339 A-A-
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            1681 2 +     41679 A-A-
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1227 3 -      9135 aga-
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              16131 3 -     32273 a-ga
i Gorilla_beringei.k141_3596273                          I 117 T 117
s Gorilla_gorilla.LT578341.1                             186338268 3 + 186649187 a-ga
i Gorilla_gorilla.LT578341.1                             I 108 T 108
s Hapalemur_alaotrensis.k141_170648                           6888 2 -     19426 A-A-
i Hapalemur_alaotrensis.k141_170648                      C 0 I 1
s Hapalemur_gilberti.k141_488810                             12037 2 -     15286 A-A-
i Hapalemur_gilberti.k141_488810                         C 0 I 1
s Hapalemur_griseus.k141_1511508                             13676 2 +     18253 A-A-
i Hapalemur_griseus.k141_1511508                         C 0 I 1
s Hapalemur_meridionalis.k141_248335                         13777 2 -     41752 A-A-
i Hapalemur_meridionalis.k141_248335                     C 0 I 1
s Hapalemur_occidentalis.k141_907772                         13614 2 -     16460 A-A-
i Hapalemur_occidentalis.k141_907772                     C 0 I 1
s Helogale_parvula.HelPar_flattened_line_2585               242329 2 +    327341 T-A-
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                 905 2 +      7595 T-A-
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 I 28
s Hoolock_leuconedys.ctg274                                    434936 3 +    630532 a-ga
i Hoolock_leuconedys.ctg274                                 I 110 T 110
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45023 2 +     55795 T-A-
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Indri_indri.k141_3655594                                   22567 2 +     31101 A-A-
i Indri_indri.k141_3655594                               C 0 I 1
s Lasiurus_borealis.LasBor_scaffold_32767                    14139 2 -     42476 T-A-
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 2328
s Lemur_catta.scaffold_24                                 15524129 2 -  30322482 A-A-
i Lemur_catta.scaffold_24                                C 0 I 1
s Leontocebus_fuscicollis.k141_1820339                        7762 3 +     64341 a-ga
i Leontocebus_fuscicollis.k141_1820339                   I 270 T 270
s Leontocebus_illigeri.k141_3350179                           4815 3 +      4941 A-AG
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        7790 3 +     35603 a-ga
i Leontocebus_nigricollis.k141_4610752                   I 257 T 257
s Leontopithecus_chrysomelas.k141_1519602                    29210 3 +     38576 a-ga
i Leontopithecus_chrysomelas.k141_1519602                I 216 T 216
s Leontopithecus_rosalia.k141_464620                         25910 3 +     66356 a-ga
i Leontopithecus_rosalia.k141_464620                     I 219 T 219
s Lepilemur_ankaranensis.k141_596936                         11023 2 -     23766 A-A-
i Lepilemur_ankaranensis.k141_596936                     C 0 I 1
s Lepilemur_dorsalis.k141_577674                             29084 2 +     45836 A-A-
i Lepilemur_dorsalis.k141_577674                         C 0 I 1
s Lepilemur_ruficaudatus.k141_121139                          1624 2 +     25010 A-A-
i Lepilemur_ruficaudatus.k141_121139                     C 0 I 1
s Lepilemur_septentrionalis.k141_185316                      27020 2 +     54090 A-A-
i Lepilemur_septentrionalis.k141_185316                  C 0 I 1
s Leptonychotes_weddellii.KB714746.1                       3042851 2 +   3914936 T-A-
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6499 1 -     14121 --a-
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437277 3 +   1826925 a-ga
i Lophocebus_aterrimus.ctg367                            I 97 T 97
s Loris_lydekkerianus.k141_2539221                            5925 2 +     11245 A-A-
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004745 2 +   6120653 A-A-
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4217333 2 -  43346337 T-A-
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17955123 2 -  59628241 T-A-
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               6990 3 +     40492 A-AA
i Macaca_arctoides.k141_2326796                          C 0 I 100
s Macaca_assamensis.Contig5                               59676249 3 +  60120075 A-AA
i Macaca_assamensis.Contig5                              C 0 I 100
s Macaca_cyclopis.k119_18836                                 12762 3 -     26193 a-aa
i Macaca_cyclopis.k119_18836                             C 0 I 103
s Macaca_fascicularis.k141_814140                            80546 3 -    114318 a-aa
i Macaca_fascicularis.k141_814140                        C 0 I 103
s Macaca_fuscata.k119_255327                                  6237 3 -     23192 a-aa
i Macaca_fuscata.k119_255327                             C 0 I 99
s Macaca_leonina.k141_3550399                                15706 3 -     29190 a-aa
i Macaca_leonina.k141_3550399                            C 0 I 103
s Macaca_maura.k141_2733130                                  24271 3 +     37952 A-AA
i Macaca_maura.k141_2733130                              C 0 I 103
s Macaca_mulatta.NC_041758.1                             186839360 3 + 187317192 a-aa
i Macaca_mulatta.NC_041758.1                             C 0 I 103
s Macaca_nemestrina.KQ007038.1                            25457923 3 -  25927173 a-aa
i Macaca_nemestrina.KQ007038.1                           C 0 I 103
s Macaca_nigra.k141_1655396                                  80119 3 +     89720 A-AA
i Macaca_nigra.k141_1655396                              C 0 I 103
s Macaca_radiata.k141_3680011                                 7120 3 +     20474 A-AA
i Macaca_radiata.k141_3680011                            C 0 I 103
s Macaca_siberu.k141_635500                                   6920 3 -     14993 a-aa
i Macaca_siberu.k141_635500                              C 0 I 103
s Macaca_silenus.Contig273                                  329786 3 -    668171 a-aa
i Macaca_silenus.Contig273                               C 0 I 103
s Macaca_thibetana.k99_256239                                 5236 3 -     24072 a-aa
i Macaca_thibetana.k99_256239                            C 0 I 100
s Macaca_tonkeana.k141_1498238                               25858 3 -     45290 a-aa
i Macaca_tonkeana.k141_1498238                           C 0 I 103
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90623 2 +     94391 T-A-
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23937552 3 -  24302211 a-ga
i Mandrillus_leucophaeus.scaffold280                     I 99 T 99
s Mandrillus_sphinx.Contig270                               351676 3 +    752769 a-ga
i Mandrillus_sphinx.Contig270                            I 95 T 95
s Manis_javanica.JSZB01003497.1                              18501 2 +    737560 T-A-
i Manis_javanica.JSZB01003497.1                          C 0 I 3
s Manis_pentadactyla.KN006162.1                              50490 2 -    317179 T-A-
i Manis_pentadactyla.KN006162.1                          C 0 I 3
s Megaderma_lyra.MegLyr_scaffold_4542                        10342 2 -    207569 A-T-
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10051 2 +     13704 A-A-
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mico_argentatus.k141_1239457                                6001 3 -      7380 a-ga
i Mico_argentatus.k141_1239457                           I 231 T 231
s Mico_humeralifer.k141_1976199                               4843 3 +     18990 a-ag
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      6013 3 -      7356 a-ga
i Mico_schneideri.k141_1950671                                 I 231 T 231
s Microcebus_murinus.CM007674.1                           18291549 2 -  93316391 a-a-
i Microcebus_murinus.CM007674.1                          C 0 I 1
s Microgale_talazaci.MicTal_scaffold_6613                    22151 2 -    145209 C-A-
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                15657 2 -     19307 G-A-
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850624 2 +   8254450 T-A-
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34305 2 +     64694 T-A-
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9261 3 -     28506 a-ga
i Miopithecus_ogouensis.k141_534055                      I 83 T 83
s Mirounga_angustirostris.MirAng_flattened_line_93702         5719 2 -      8324 T-A-
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      9094 2 -     37649 A-A-
i Mirza_zaza.k141_952172                                 C 0 I 1
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141623 2 -    366855 T-A-
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35428 2 +     37127 T-A-
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           6820 2 +     14753 T-A-
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mustela_putorius.JH418006.1                               301242 2 -  14710649 A-A-
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                280463 2 -  10118263 T-A-
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1587725 2 -   6019432 T-A-
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3903817 2 -   4330536 T-A-
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_482318                         491 2 -       721 T-A-
i Myotis_myotis.MyoMyo_scaffold_482318                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189266 2 +    196477 T-C-
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nasalis_larvatus.k141_413338                               15260 3 +     21681 a-ga
i Nasalis_larvatus.k141_413338                           I 107 T 107
s Neomonachus_schauinslandi.NINY01007730.1                20306973 2 +  31847680 t-a-
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 225
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149385 2 -   9404916 T-A-
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102586290 2 - 196305487 T-A-
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              214 2 +      2075 T-A-
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761644 2 + 199412804 T-A-
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1363522 1 +   3988456 --a-
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              506658 2 -   2017862 T-A-
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9851 2 -     18566 T-A-
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147380 1 + 174332312 --a-
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462353 2 -    559221 T-A-
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4209 2 +      8798 A-A-
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696372 2 -   1103335 A-A-
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    44220 3 +     80009 a-ga
i Pan_paniscus.KQ411613.1                                I 113 T 113
s Pan_troglodytes.CM009242.2                             189143122 3 + 189151597 a-ga
i Pan_troglodytes.CM009242.2                             I 216 I 8
s Panthera_onca.PanOnc_flattened_line_3271                  151178 2 +    230217 T-A-
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                264387 2 +  18783137 T-A-
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4721266 2 -   8748460 T-A-
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183443354 3 + 183742232 a-ga
i Papio_anubis.CM001495.2                                I 151 T 151
s Papio_cynocephalus.k141_4307930                             7000 3 +     20448 a-ga
i Papio_cynocephalus.k141_4307930                        I 99 T 99
s Papio_hamadryas.Contig39                                20563812 3 +  20919399 a-ga
i Papio_hamadryas.Contig39                               I 103 T 103
s Papio_kindae.k141_1936966                                   5744 3 +     41871 a-ga
i Papio_kindae.k141_1936966                              I 99 T 99
s Papio_papio.k141_802527                                     9037 3 +     27711 a-ga
i Papio_papio.k141_802527                                I 107 T 107
s Papio_ursinus.k141_3428135                                  9106 3 +      9205 a-ga
i Papio_ursinus.k141_3428135                             I 95 T 95
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12660 2 -     78924 T-A-
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10179 2 +     13100 A-A-
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8585 2 +     25941 A-A-
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Piliocolobus_badius.k141_1234363                           43751 3 +     62158 a-ga
i Piliocolobus_badius.k141_1234363                       I 87 T 87
s Piliocolobus_gordonorum.k141_381342                        38498 3 +     89929 a-ga
i Piliocolobus_gordonorum.k141_381342                    I 103 T 103
s Piliocolobus_kirkii.k141_448987                            39914 3 +     51399 a-ga
i Piliocolobus_kirkii.k141_448987                        I 103 T 103
s Piliocolobus_tephrosceles.PDMG02000141.1                14296152 3 -  14605196 a-ga
i Piliocolobus_tephrosceles.PDMG02000141.1               I 103 T 103
s Pongo_abelii.CM009266.2                                189131258 3 + 189387572 a-ga
i Pongo_abelii.CM009266.2                                I 109 T 109
s Pongo_pygmaeus.ctg66                                     9570865 3 +   9816681 a-ga
i Pongo_pygmaeus.ctg66                                   I 108 T 108
s Presbytis_comata.k141_677006                               73436 3 -     81375 a-ga
i Presbytis_comata.k141_677006                           I 103 T 103
s Presbytis_mitrata.k141_1087752                              5256 3 +     19060 a-ga
i Presbytis_mitrata.k141_1087752                         I 103 T 103
s Procavia_capensis.ProCapCap_scaffold_85530                 13360 2 -     22811 T-A-
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 I 28
s Prolemur_simus.MPIZ01000396.1                            2596809 2 -   4620579 A-a-
i Prolemur_simus.MPIZ01000396.1                          C 0 I 1
s Propithecus_coquerelli.NW_012148875.1                     990790 2 +   2598838 A-A-
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 1
s Propithecus_coronatus.k141_347390                          29102 2 +     38485 A-A-
i Propithecus_coronatus.k141_347390                      C 0 I 1
s Propithecus_diadema.k141_58108                              1145 2 -     13098 A-A-
i Propithecus_diadema.k141_58108                         C 0 I 1
s Propithecus_edwardsi.k141_1176054                          26623 2 +     35766 A-A-
i Propithecus_edwardsi.k141_1176054                      C 0 I 1
s Propithecus_perrieri.k141_1200571                           4810 2 -     24134 A-A-
i Propithecus_perrieri.k141_1200571                      C 0 I 1
s Propithecus_tattersalli.k141_790011                        28635 2 -     67325 A-A-
i Propithecus_tattersalli.k141_790011                    C 0 I 1
s Propithecus_verreauxi.k141_956661                           4858 2 -      6182 A-A-
i Propithecus_verreauxi.k141_956661                      C 0 I 1
s Pteronotus_parnellii.KE909381.1                            15076 2 -     21811 T-A-
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40241 2 +     42204 A-A-
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22976791 2 +  28871421 T-A-
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                6844 2 -      8028 T-A-
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20274332 2 -  38429054 T-A-
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15269 3 -     91421 a-ca
i Pygathrix_cinerea.k141_1153803                         I 107 T 107
s Pygathrix_nigripes_b.ctg100                                 7609389 3 +   7812017 a-ca
i Pygathrix_nigripes_b.ctg100                               I 107 T 107
s Pygathrix_nigripes_a.k141_215492                             15241 3 -     72585 a-ca
i Pygathrix_nigripes_a.k141_215492                         I 107 T 107
s Rhinopithecus_bieti.k119_217274                             6954 3 -     11128 a-ga
i Rhinopithecus_bieti.k119_217274                        I 106 T 106
s Rhinopithecus_roxellana.NC_044550.1                     91236301 3 - 195417433 a-ga
i Rhinopithecus_roxellana.NC_044550.1                    I 100 T 100
s Rhinopithecus_strykeri.ctg102                            7671959 3 +   7961872 a-ga
i Rhinopithecus_strykeri.ctg102                          I 106 T 106
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87812 2 -     96226 T-A-
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_8081                                   378 3 +     42994 a-ga
i Saguinus_bicolor.k141_8081                             n 3 I 8
s Saguinus_imperator.k141_2524406                             2127 3 +      2197 a-ag
i Saguinus_imperator.k141_2524406                        C 0 C 0
s Saguinus_inustus.k141_699149                               13546 3 +     13640 a-ag
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               8415 3 +      8564 a-ag
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469729 3 + 209938924 a-ga
i Saguinus_midas.LG03                                    I 464 T 464
s Saguinus_mystax.k141_374627                                 8364 3 -      9399 a-ga
i Saguinus_mystax.k141_374627                            I 393 T 393
s Saimiri_boliviensis.NW_024100920.1                     119951106 3 - 121099817 a-ga
i Saimiri_boliviensis.NW_024100920.1                     I 223 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23445 3 +     46362 a-ga
i Saimiri_cassiquiarensis.k141_2188234                   I 106 C 0
s Saimiri_macrodon.k141_716185                               23540 3 +     45824 a-ga
i Saimiri_macrodon.k141_716185                           I 106 C 0
s Saimiri_oerstedii.k141_1487881                             40219 3 -     64574 a-ga
i Saimiri_oerstedii.k141_1487881                         I 157 C 0
s Saimiri_sciureus.k141_2278166                               3291 3 -     23631 a-ga
i Saimiri_sciureus.k141_2278166                          I 223 C 0
s Saimiri_ustus.k141_1484609                                 23330 3 -     61129 a-ag
i Saimiri_ustus.k141_1484609                             C 0 I 113
s Sapajus_apella.ctg103                                    5420653 3 -   5703754 a-aa
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          55694 3 -     80660 a-aa
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153222 2 -    313613 T-A-
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          19673 3 -     19888 A-AG
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26983 3 +     39453 a-ga
i Semnopithecus_hypoleucos.k141_1615806                  I 107 T 107
s Semnopithecus_johnii.k141_670120                            7501 3 +     27826 a-ga
i Semnopithecus_johnii.k141_670120                       I 106 T 106
s Semnopithecus_priam.k141_638794                             7023 3 -     19483 a-ga
i Semnopithecus_priam.k141_638794                        I 107 T 107
s Semnopithecus_schistaceus.k141_1572284                       324 3 -     12762 A-GA
i Semnopithecus_schistaceus.k141_1572284                 I 25 I 8
s Semnopithecus_vetulus.k141_910252                            185 3 +     13763 A-GA
i Semnopithecus_vetulus.k141_910252                      I 30 I 8
s Solenodon_paradoxus.SolPar_flattened_line_126               3782 2 +   1910179 G-A-
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13651028 2 -  18376816 T-G-
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30742 2 +     97271 T-A-
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              18329 2 -    196729 T-A-
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6810504 2 +  69701581 C-A-
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                10805 2 +     41958 T-A-
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72627 2 +    116680 T-C-
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118759 2 -    156842 T-A-
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387216 2 +    539355 T-A-
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               26424 3 +     70052 a-ag
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1257 3 -     16117 a-aG
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428672 3 + 186847797 a-ga
i Theropithecus_gelada.CM009954.1                        I 99 T 99
s Tolypeutes_matacus.TolMat_scaffold_228639                   6410 2 +      8208 T-A-
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81198 2 +    610378 T-A-
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         11074 3 -     20410 a-ga
i Trachypithecus_auratus.k141_722599                     I 107 T 107
s Trachypithecus_crepusculus.k141_582567                       188 3 -     12674 a-ga
i Trachypithecus_crepusculus.k141_582567                 I 107 T 107
s Trachypithecus_cristatus.k141_580354                       11175 3 +     19930 a-ga
i Trachypithecus_cristatus.k141_580354                   I 107 T 107
s Trachypithecus_francoisi.k141_1412647                       7586 3 -     19997 a-ga
i Trachypithecus_francoisi.k141_1412647                  I 91 T 91
s Trachypithecus_geei.k141_277701                            47725 3 -     60166 a-ga
i Trachypithecus_geei.k141_277701                        I 106 T 106
s Trachypithecus_germaini.k141_912491                        15197 3 -     27529 a-ga
i Trachypithecus_germaini.k141_912491                    I 107 T 107
s Trachypithecus_hatinhensis.k141_143409                     15141 3 -     18194 a-ga
i Trachypithecus_hatinhensis.k141_143409                 I 107 T 107
s Trachypithecus_laotum.k141_907409                           8853 3 -     21137 a-ga
i Trachypithecus_laotum.k141_907409                      I 91 T 91
s Trachypithecus_leucocephalus.k141_587342                    7556 3 -     10723 a-ga
i Trachypithecus_leucocephalus.k141_587342               I 91 T 91
s Trachypithecus_melamera.k141_434728                         6728 3 +      9834 a-ga
i Trachypithecus_melamera.k141_434728                    I 107 T 107
s Trachypithecus_obscurus.k141_190785                        25041 3 +     32220 a-ga
i Trachypithecus_obscurus.k141_190785                    I 107 T 107
s Trachypithecus_phayrei.ctg124                            5939143 3 +   6242583 a-ga
i Trachypithecus_phayrei.ctg124                          I 107 T 107
s Trachypithecus_pileatus.k141_2007326                        8394 3 +     20839 a-ga
i Trachypithecus_pileatus.k141_2007326                   I 106 T 106
s Trichechus_manatus.JH594705.1                            4293259 2 +  10818551 T-A-
i Trichechus_manatus.JH594705.1                          C 0 I 28
s Tupaia_chinensis.KB320699.1                              2155667 2 +   4065304 A-G-
i Tupaia_chinensis.KB320699.1                            C 0 I 206
s Tupaia_tana.TupTan_flattened_line_97126                     9318 2 -     10553 A-G-
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   53327 2 -     77625 T-A-
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4850447 2 -   5085361 T-A-
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  11469 2 +     50397 A-A-
i Varecia_rubra.k141_590885                              C 0 I 1
s Varecia_variegata.k141_1128296                             11528 2 +     24756 A-A-
i Varecia_variegata.k141_1128296                         C 0 I 1
s Vicugna_pacos.KN270157.1                                 5371885 2 -   5488506 T-A-
i Vicugna_pacos.KN270157.1                               C 0 I 27
s Vulpes_lagopus.VulLag_flattened_line_30954                 10798 2 -     43706 T-A-
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          5371 2 +     86975 T-A-
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Mus_pahari.LT608297.1                                   31355110 4 -  89631738 I
e Mus_spretus.CM004101.1                                  90752512 4 - 130317789 I
e Mus_musculus.chr8                                       87650451 4 - 129401213 I
e Mus_caroli.LT608237.1                                   84361453 4 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      14994 0 +     63895 C
e Xerus_inauris.XerIna_scaffold_2302                          1130 37 +    224448 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              105508 16 +    114563 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Spermophilus_dauricus.KZ294078.1                         1953990 37 -   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_42075                      411 4 -     30804 I
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570713 4 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Psammomys_obesus.NESX01036370.1                            10483 4 -     21651 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             1767 23 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     28190 14 -     29689 I
e Peromyscus_maniculatus.KI615324.1                       18194865 4 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80239 4 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   25239 4 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  746917 16 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Nannospalax_galili.KL204047.1                            2034163 2 -   3037898 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     71307 16 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              4749 286 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11260571 4 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182333 4 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 32827 16 +    140813 I
e Marmota_marmota.CZRN01000018.1                          33103135 37 -  40650429 I
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276898 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Ictidomys_tridecemlineatus.JH393364.1                    7520939 33 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      83174 17 +    135385 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20662285 17 +  22651954 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32469 218 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31346 100 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Fukomys_damarensis.KN121974.1                             850497 16 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Ellobius_talpinus.LOJH01081419.1                             523 4 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          20392 4 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1097713 2 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    36463 16 +     67921 I
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35828 16 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    837151 8 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11667658 4 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 50291 2 +     63868 I
e Colobus_guereza.LG01                                   199948958 0 + 200372422 C
e Chinchilla_lanigera.JH722012.1                           1252870 15 +   2543920 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Castor_canadensis.CasCan_scaffold_2074                    137145 9 +    179628 I
e Capromys_pilorides.CapPil_scaffold_65020                    1121 16 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      12672 27 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74597 0 -     89534 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     70877 18 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       6762  8 +     62944 aa------------------------------ag--a----g---aa
s Acinonyx_jubatus.LLWD01001279.1                           827327 33 -   1699592 TA-----TTCTGCTTCCAATATTAACATGTTGAC--A----G---AA
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 48
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510588 31 -  29979442 TA-------TTCTGCTGCTTAAGATGTAGAATGT--A----G---AA
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 63
s Ailurus_fulgens.LNAC01001112.1                             79358 36 -    347723 CA--TTCTGCTTCCAGTATTAAGATGTAGAATGC--A----G---AA
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 64
s Allenopithecus_nigroviridis.k141_3361533                   14691  8 -     52922 at------------------------------ag--a----g---aa
i Allenopithecus_nigroviridis.k141_3361533               T 119 C 0
s Allochrocebus_lhoesti.k141_4309873                         14627  8 -     28001 aa------------------------------ag--a----g---aa
i Allochrocebus_lhoesti.k141_4309873                     T 99 C 0
s Allochrocebus_preussi.k141_1442296                          5123  8 -     18505 aa------------------------------ag--a----g---aa
i Allochrocebus_preussi.k141_1442296                     T 99 C 0
s Allochrocebus_solatus.k141_166128                           5977  8 -     12518 aa------------------------------ag--a----g---aa
i Allochrocebus_solatus.k141_166128                      T 99 C 0
s Alouatta_belzebul.k141_3560514                              7455  8 +     51355 ga------------------------------ag--g----g---ag
i Alouatta_belzebul.k141_3560514                         C 0 I 184
s Alouatta_caraya.k141_1701091                                 577  8 -     36483 ga------------------------------ag--g----g---ag
i Alouatta_caraya.k141_1701091                           C 0 I 170
s Alouatta_discolor.k141_566626                              11199  8 +     28687 ga------------------------------aa--g----a---tg
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1509701                                25023  8 +     25266 ga------------------------------aa--g----a---tg
i Alouatta_juara.k141_1509701                            I 177 C 0
s Alouatta_macconnelli.k141_918386                             571  8 -      9457 ga------------------------------ag--g----g---ag
i Alouatta_macconnelli.k141_918386                       C 0 I 173
s Alouatta_nigerrima.k141_3472759                            18149  8 -     18578 ga------------------------------ag--g----g---ag
i Alouatta_nigerrima.k141_3472759                        C 0 I 181
s Alouatta_palliata.k141_2135620                              3536  8 +     47717 AA------------------------------AG--A----G---AA
i Alouatta_palliata.k141_2135620                         T 178 I 178
s Alouatta_puruensis.k141_362188                               426  8 +      5663 ga------------------------------aa--g----a---tg
i Alouatta_puruensis.k141_362188                         I 181 C 0
s Alouatta_seniculus.k141_117119                             14865  3 +     50774 GA------------------------------A--------------
i Alouatta_seniculus.k141_117119                         C 0 I 18
s Anoura_caudifer.AnoCau_scaffold_1412                      185353 33 +    412891 CA-----TTCTGATTTCAATATTAAGATATTAAG--A----G---AA
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 64
s Aotus_azarae.k141_3104676                                  15478  8 -     33861 aa------------------------------ag--a----g---aa
i Aotus_azarae.k141_3104676                              T 200 I 3
s Aotus_griseimembra.k141_2240599                            15498  8 -     34016 aa------------------------------ag--a----g---aa
i Aotus_griseimembra.k141_2240599                        T 216 I 3
s Aotus_nancymaae.KZ198451.1                               4297895  8 -   5030052 aa------------------------------ag--a----g---aa
i Aotus_nancymaae.KZ198451.1                             T 208 I 3
s Aotus_trivirgatus.k141_2152450                             15500  8 -     34685 aa------------------------------ag--a----g---aa
i Aotus_trivirgatus.k141_2152450                         T 212 I 3
s Aotus_vociferans.k141_344750                               28624  8 -     47192 aa------------------------------ag--a----g---aa
i Aotus_vociferans.k141_344750                           T 212 I 3
s Aplodontia_rufa.AprRuf_scaffold_68852                      12699  6 +     20879 --------------------------------GG--A----A---AG
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 27 C 0
s Arctocebus_calabarensis.k141_2318572                       11545 11 +     14667 AA------------------------------TG--GGG-GG---GG
i Arctocebus_calabarensis.k141_2318572                   C 0 I 1
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4762 33 +     43469 CA-----TTCTGATTTCAATATTCAGATATTAAC--A----G---AA
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 63
s Avahi_laniger.k141_765380                                  53749 10 -     92717 GG------------------------------AGCCA----G---GG
i Avahi_laniger.k141_765380                              I 1 I 1
s Avahi_peyrierasi.k141_1424874                              54376 10 +     85213 GG------------------------------AGCCA----G---GG
i Avahi_peyrierasi.k141_1424874                          I 1 I 1
s Callibella_humilis.k141_1278103                             5233  8 -     10423 aa------------------------------ag--a----g---aa
i Callibella_humilis.k141_1278103                        T 257 I 257
s Callimico_goeldii.k141_1091182                             24703  9 +     31915 aa------------------------------ag--a----g--aaa
i Callimico_goeldii.k141_1091182                         T 255 I 254
s Callithrix_geoffroyi.k119_512088                            5199  8 +      5267 aa------------------------------ag--a----g---aa
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590413  8 - 189096842 aa------------------------------ag--a----g---aa
i Callithrix_jacchus.pat_scaffold_3                      T 231 I 231
s Callithrix_kuhlii.k119_1164682                             11944  8 -     12001 AA------------------------------AG--A----G---AA
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002384 33 -  17673402 CA-----TTCTGCTTTCAGTACTAAGATGTTAGA--A----G---AA
i Camelus_bactrianus.KN276810.1                          C 0 I 68
s Camelus_dromedarius.KN272107.1                           2334842 33 -   7040546 CA-----TTCTGCTTTCAGTACTAAGATGTTAGA--A----G---AA
i Camelus_dromedarius.KN272107.1                         C 0 I 68
s Camelus_ferus.KB017975.1                                  403125 33 -   1652518 CA-----TTCTGCTTTCAGTACTAAGATGTTAGA--A----G---AA
i Camelus_ferus.KB017975.1                               C 0 I 68
s CanFam4.chr16                                           17799177 33 -  60362399 CA-----TTCTGCTTTCAATATTAAGATGTTAGC--A----G---AA
i CanFam4.chr16                                          C 0 I 78
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    185234 33 -    185531 CA-----TTCTGCTTTCAATATTAAGATGTTAGC--A----G---AA
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 I 63
s Canis_lupus_dingo.QKWQ01000480.1                         9034620 33 -   9314153 CA-----TTCTGCTTTCAATATTAAGATGTTAGC--A----G---AA
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 63
s Canis_lupus_familiaris.chr16                            17958885 33 -  59632846 CA-----TTCTGCTTTCAATATTAAGATGTTAGC--A----G---AA
i Canis_lupus_familiaris.chr16                           C 0 I 63
s Canis_lupus_orion.HG994398.1                            18500397 33 +  63665305 CA-----TTCTGCTTTCAATATTAAGATGTTAGC--A----G---AA
i Canis_lupus_orion.HG994398.1                           C 0 I 63
s Capromys_pilorides.CapPil_scaffold_65020                    1137  6 -     12242 --------------------------------AA--G----A---GG
i Capromys_pilorides.CapPil_scaffold_65020               I 16 C 0
s Carlito_syrichta.NW_007247396.1                           201420  8 +    308752 ga------------------------------ag--g----a---ag
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5120 33 -     11696 CA-----TTCTGATTTCAATATTAAGATATTAAG--A----G---AA
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 59
s Castor_canadensis.CasCan_scaffold_2074                    137154  6 +    179628 --------------------------------GG--G----T---AA
i Castor_canadensis.CasCan_scaffold_2074                 I 9 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     93014 33 +    217609 CT-----TTCTGCTTCCAATACAAAGATGTTAGA--A----G---TA
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 74
s Cebuella_niveiventris.k141_1251222                          9858  8 -     11392 aa------------------------------ag--a----g---aa
i Cebuella_niveiventris.k141_1251222                     T 267 I 267
s Cebuella_pygmaea.k141_1309012                               5956  8 -      7577 aa------------------------------ag--a----g---aa
i Cebuella_pygmaea.k141_1309012                          T 237 I 237
s Cebus_albifrons.Contig27                                25651985  7 +  26074798 aa------------------------------gg--a----g----a
i Cebus_albifrons.Contig27                               T 866 I 867
s Cebus_olivaceus.k141_398305                                 1561  7 +      1777 aa------------------------------gg--a----g----a
i Cebus_olivaceus.k141_398305                            C 0 I 5
s Cebus_unicolor.k141_544048                                 49898  7 -     74725 aa------------------------------gg--a----g----a
i Cebus_unicolor.k141_544048                             C 0 I 5
s Cephalopachus_bancanus.k141_1423433                         5425  8 +     31688 ga------------------------------ag--g----a---ag
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12231442 33 +  27778364 CA-----TTCTGCTTCCAATTTTAGGATATTAAG--A----G---AA
i Ceratotherium_simum.JH767749.1                         C 0 I 64
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2469 33 -     25243 CA-----CTCTGCTTCCAATTTTAGGATATTAAG--A----G---AA
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 I 64
s Cercocebus_atys.KQ010504.1                               4475636  8 +   4669795 aa------------------------------ag--a----g---aa
i Cercocebus_atys.KQ010504.1                             T 99 C 0
s Cercocebus_chrysogaster.k141_393940                        14181  8 -     19203 aa------------------------------ag--a----g---aa
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3342297                            797  8 -     14043 aa------------------------------ag--a----g---aa
i Cercocebus_lunulatus.k141_3342297                      T 99 C 0
s Cercocebus_torquatus.k141_3057011                           8833  8 +     27781 aa------------------------------ag--a----g---aa
i Cercocebus_torquatus.k141_3057011                      T 96 C 0
s Cercopithecus_ascanius.k141_1024104                         8998  8 -     20310 aa------------------------------ag--a----g---aa
i Cercopithecus_ascanius.k141_1024104                    T 99 C 0
s Cercopithecus_cephus.k141_1078548                          11977  8 +     29689 aa------------------------------ag--a----g---aa
i Cercopithecus_cephus.k141_1078548                      T 100 C 0
s Cercopithecus_diana.k141_1150327                            6731  8 -     20078 aa------------------------------ag--a----g---aa
i Cercopithecus_diana.k141_1150327                       T 99 C 0
s Cercopithecus_hamlyni.k141_187466                          14654  8 -     27936 aa------------------------------ag--a----g---aa
i Cercopithecus_hamlyni.k141_187466                      T 99 C 0
s Cercopithecus_lowei.k141_1854285                            3518  8 -     17152 aa------------------------------ag--a----g---aa
i Cercopithecus_lowei.k141_1854285                       T 99 C 0
s Cercopithecus_albogularis.ctg5                                38817057  8 +  39242232 aa------------------------------ag--a----g---aa
i Cercopithecus_albogularis.ctg5                               T 99 C 0
s Cercopithecus_mona.ctg39                                21222749  8 -  21565898 aa------------------------------ag--a----g---aa
i Cercopithecus_mona.ctg39                               T 99 C 0
s Cercopithecus_neglectus.k141_2526306                       39867  8 -     53127 aa------------------------------ag--a----g---aa
i Cercopithecus_neglectus.k141_2526306                   T 99 C 0
s Cercopithecus_nictitans.k141_1119862                         118  8 +     13442 aa------------------------------ag--a----g---aa
i Cercopithecus_nictitans.k141_1119862                   n 27 C 0
s Cercopithecus_petaurista.k141_807961                       14667  8 -     27947 aa------------------------------ag--a----g---aa
i Cercopithecus_petaurista.k141_807961                   T 99 C 0
s Cercopithecus_pogonias.k141_822820                         14643  8 +     17596 aa------------------------------ag--a----g---aa
i Cercopithecus_pogonias.k141_822820                     T 99 C 0
s Cercopithecus_roloway.k141_2581234                           690  8 +     14005 aa------------------------------ag--a----g---aa
i Cercopithecus_roloway.k141_2581234                     T 99 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             539 33 -      8501 CT----TTCTGTTTCTGGTATTAAAGATGCCAG---A----G---AA
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 I 65
s Cheirogaleus_major.k141_333249                             21130 10 -     52598 GG------------------------------GGCCG----G---GG
i Cheirogaleus_major.k141_333249                         I 1 C 0
s Cheirogaleus_medius.k141_1055463                           16495 10 +     57038 GG------------------------------GGCTG----G---GG
i Cheirogaleus_medius.k141_1055463                       I 1 C 0
s Chinchilla_lanigera.JH722012.1                           1252885  6 +   2543920 --------------------------------gg--g----a---ag
i Chinchilla_lanigera.JH722012.1                         I 15 C 0
s Chiropotes_albinasus.k141_2813271                          11110  8 +     11226 AA------------------------------AG--A----C---AA
i Chiropotes_albinasus.k141_2813271                      I 3 I 7
s Chlorocebus_aethiops.ctg25                              18428627  8 -  18827391 aa------------------------------ag--a----g---aa
i Chlorocebus_aethiops.ctg25                             T 99 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15064  8 -     50209 aa------------------------------ag--a----g---aa
i Chlorocebus_pygerythrus.k141_1025673                   T 99 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422064  8 + 135778131 aa------------------------------ag--a----c---aa
i Chlorocebus_sabaeus.CM001947.1                         T 99 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 18317 35 +     19366 TA---TTCTGTTTTCTGATATTAAAGATGTCAGA--A----G---AA
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 I 65
s Choloepus_hoffmanni.KN194906.1                            173393 35 +    839153 TA---TTCTGTTTTCTGATATTAAAGATGTCAGA--A----G---AA
i Choloepus_hoffmanni.KN194906.1                         C 0 I 65
s Colobus_angolensis.KN981557.1                            1910569  8 +   2368649 aa------------------------------ag--a----g---ag
i Colobus_angolensis.KN981557.1                          T 103 I 103
s Colobus_polykomos.k141_906115                              37104  7 +     84244 -a------------------------------ag--a----g---ag
i Colobus_polykomos.k141_906115                          T 102 I 103
s Condylura_cristata.JH655891.1                           17548109 33 -  53390261 GA-----TTCTGCTCCCAACACAAAGATGTTTAC--A----G---AA
i Condylura_cristata.JH655891.1                          C 0 I 67
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14409 33 -     20389 AA-----GTCTGCTTTCAATAATAAGATATTAAA--A----G---AA
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 73
s Crocidura_indochinensis.CroInd_scaffold_37019               3000 28 -     19598 CA----------TTCTTCCATAATTAAGGTATTA--A----G---AA
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 I 88
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28498 33 -     87169 TA-----TTCTGCTTACAATATTAAGATGTCAAC--A----G---AA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 64
s Ctenodactylus_gundi.CteGun_scaffold_65                    837159  6 +   1526836 --------------------------------GG--C----A---GG
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 8 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35844  6 +     51376 --------------------------------AA--G----A---GG
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 16 C 0
s Dasypus_novemcinctus.JH564415.1                            63546 33 +   2246927 CA----TTCTGTTTCTGATATTAAAGATGCCAG---A----G---GA
i Dasypus_novemcinctus.JH564415.1                        C 0 I 65
s Daubentonia_madagascariensis.ctg71                      12537346 10 -  12879189 GA------------------------------GGCCA----G---GG
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630133 33 +  20541912 CA-----TTCTGACTTCAACATTGAGATATTAAG--A----G---AA
i Desmodus_rotundus.KZ672289.1                           C 0 I 58
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673293 33 +   1390856 CA-----TTCGGCTTCCAATTTTAAGATATTAAG--A----G---AA
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 64
s Diceros_bicornis.DicBicMic_scaffold_5955                    6045 33 +    198055 CA-----TTCTGCTTCCAATTTTAGGATATTAAG--A----G---AA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 64
s Dinomys_branickii.DinBra_scaffold_21862                    36479  6 +     67921 --------------------------------GG--G----A---AG
i Dinomys_branickii.DinBra_scaffold_21862                I 16 C 0
s Echinops_telfairi.JH980293.1                            48780406 34 + 111700974 CA----AATGGTTTCTAATATTACAGATGTTAAA--A----G---AG
i Echinops_telfairi.JH980293.1                           C 0 I 243
s Eidolon_helvum.KE759718.1                                  10534 30 +     11740 CATTCtg-----cttttaat--a-agattttagg--A----G---AA
i Eidolon_helvum.KE759718.1                              C 0 I 63
s Elephantulus_edwardii.JH947257.1                         1097715  1 +  10337057 ----------------------------------------------A
i Elephantulus_edwardii.JH947257.1                       I 2 I 56
s Enhydra_lutris.KZ291758.1                               16329316 36 -  41312741 CA--TTCTGCTTCCAATATTAAGATGTAGAATGC--A----G---AA
i Enhydra_lutris.KZ291758.1                              C 0 I 64
s Eptesicus_fuscus.JH977646.1                              2145725 33 -  14770903 CG-----TTCTGATTTCAATATTAGGAGATCAAG--A----G---AA
i Eptesicus_fuscus.JH977646.1                            C 0 I 63
s Equus_asinus.JREZ01000139.1                              1283551 33 +   4378816 CA-----TTCTGCTTCCAATATTTACATGTTAAA--A----G---AA
i Equus_asinus.JREZ01000139.1                            C 0 I 60
s Equus_caballus.CM000403.2                               18531372 33 -  39960074 CA-----TTCTGCTTCCAATATTTACATGTTAAA--A----G---AA
i Equus_caballus.CM000403.2                              C 0 I 59
s Equus_przewalskii.KK951119.1                               33400 33 +    498745 CA-----TTCTGCTTCCAATATTTACATGTTAAA--A----G---AA
i Equus_przewalskii.KK951119.1                           C 0 I 60
s Erinaceus_europaeus.JH835339.1                           3328249 33 -   7059049 CA-----TTCTACTTCCAATATTAATATGTTAAG--A----G---AA
i Erinaceus_europaeus.JH835339.1                         C 0 I 71
s Erythrocebus_patas.Contig38                             21205234  8 -  21539334 aa------------------------------ag--a----g---aa
i Erythrocebus_patas.Contig38                            T 99 C 0
s Eulemur_albifrons.k141_342033                              13852 10 -     14127 GG------------------------------GGCCG----G---AG
i Eulemur_albifrons.k141_342033                          I 1 C 0
s Eulemur_collaris.k141_377015                                6555 10 -     16928 GG------------------------------GGCCG----G---GG
i Eulemur_collaris.k141_377015                           I 1 C 0
s Eulemur_coronatus.k141_885031                              15579 10 -     25546 GG------------------------------GACCG----G---GG
i Eulemur_coronatus.k141_885031                          I 1 C 0
s Eulemur_flavifrons.k141_1184614                            12783 10 +     26330 GG------------------------------GGCCA----G---Gg
i Eulemur_flavifrons.k141_1184614                        I 1 C 0
s Eulemur_fulvus.k141_544389                                 14018 10 +     23973 GG------------------------------GGCCG----G---GG
i Eulemur_fulvus.k141_544389                             I 1 C 0
s Eulemur_macaco.k141_1562045                                12780 10 +     75513 GG------------------------------GGCCA----G---Gg
i Eulemur_macaco.k141_1562045                            I 1 C 0
s Eulemur_mongoz.k141_232305                                 10710 10 +     97555 GG------------------------------GGCCG----G---GG
i Eulemur_mongoz.k141_232305                             I 1 C 0
s Eulemur_rubriventer.k141_774594                              201 10 +     13026 GG------------------------------GGCCG----G---GG
i Eulemur_rubriventer.k141_774594                        I 1 C 0
s Eulemur_rufus.k141_1476633                                  4254 10 -     17153 GG------------------------------GGCCG----G---GG
i Eulemur_rufus.k141_1476633                             I 1 C 0
s Eulemur_sanfordi.k141_1122526                              13827 10 +    111500 GG------------------------------GGCCG----G---GG
i Eulemur_sanfordi.k141_1122526                          I 1 C 0
s Felis_catus.CM001381.2                                  20236978 33 + 206538554 TA-----TTCTGCTTCCAATATTAACATGTCGAC--A----G---AA
i Felis_catus.CM001381.2                                 C 0 I 48
s Felis_catus_fca126.CM031415.1                           20195821 33 + 205367284 TA-----TTCTGCTTCCAATATTAACATGTCGAC--A----G---AA
i Felis_catus_fca126.CM031415.1                          C 0 I 48
s Felis_nigripes.FelNig_flattened_line_20823                  9565 33 -     36744 TA-----TTCTGCTTCCAATATTAACATGTCGAC--A----G---AA
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 48
s Fukomys_damarensis.KN121974.1                             850513  6 +   3816255 --------------------------------gg--g----a---gg
i Fukomys_damarensis.KN121974.1                          I 16 C 0
s Galago_moholi.ctg2040                                     426679  9 -    453645 GA------------------------------TG--GG---G---GG
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4370  8 +     11339 GA------------------------------TG--G----G---GG
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            1683  7 +     41679 GA------------------------------TG--G----G---G-
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1230 29 -      9135 gagagagagagagagaga--gg-g-ga-----ag--g----a---ag
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            31446  6 +     49224 --------------------------------gg--a----a---ag
i Glis_glis.GliGli_scaffold_19807                        I 100 C 0
s Gorilla_beringei.k141_3596273                              16017  8 -     32273 aa------------------------------ag--a----g---aa
i Gorilla_beringei.k141_3596273                          T 117 I 117
s Gorilla_gorilla.LT578341.1                             186338163  8 + 186649187 aa------------------------------ag--a----g---aa
i Gorilla_gorilla.LT578341.1                             T 108 I 108
s Graphiurus_murinus.GraMur_scaffold_10447                   32687  6 +     78134 --------------------------------AG--A----A---AG
i Graphiurus_murinus.GraMur_scaffold_10447               I 218 C 0
s Hapalemur_alaotrensis.k141_170648                           6891 10 -     19426 GG------------------------------GGCTG----G---GG
i Hapalemur_alaotrensis.k141_170648                      I 1 C 0
s Hapalemur_gilberti.k141_488810                             12040 10 -     15286 GG------------------------------GGCTG----G---GG
i Hapalemur_gilberti.k141_488810                         I 1 C 0
s Hapalemur_griseus.k141_1511508                             13679 10 +     18253 GG------------------------------GGCTG----G---GG
i Hapalemur_griseus.k141_1511508                         I 1 C 0
s Hapalemur_meridionalis.k141_248335                         13780 10 -     41752 GG------------------------------GGCTG----G---GG
i Hapalemur_meridionalis.k141_248335                     I 1 C 0
s Hapalemur_occidentalis.k141_907772                         13617 10 -     16460 GG------------------------------GGCTG----G---GG
i Hapalemur_occidentalis.k141_907772                     I 1 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242331 33 +    327341 TA-----TTCCACTTGAAATATTAAGATATCAAC--A----G---AA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 64
s Heterocephalus_glaber.JH602082.1                        20662302  6 +  22651954 --------------------------------gg--g----a---gg
i Heterocephalus_glaber.JH602082.1                       I 17 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                 935  1 +      7595 ----------------------------------------------A
i Heterohyrax_brucei.HetBruBak_scaffold_122365           I 28 I 60
s Hoolock_leuconedys.ctg274                                    434829  8 +    630532 aa------------------------------ag--a----g---aa
i Hoolock_leuconedys.ctg274                                 T 110 I 110
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45025 33 +     55795 TA-----TTCTGCTTGCAATAGTAAGATGTCAAC--A----G---AA
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 64
s Hystrix_cristata.HysCri_scaffold_5660                      83191  6 +    135385 --------------------------------GG--A----A---GG
i Hystrix_cristata.HysCri_scaffold_5660                  I 17 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7520972  6 -   7955117 --------------------------------gg--a----a---ag
i Ictidomys_tridecemlineatus.JH393364.1                  I 33 C 0
s Indri_indri.k141_3655594                                   22570 10 +     31101 GG------------------------------GGCCA----G---GG
i Indri_indri.k141_3655594                               I 1 I 1
s Lasiurus_borealis.LasBor_scaffold_50988                    16393 33 -     29960 CG-----TTCCGATTTCAATCTTAGGAGATCAAG--A----G---AA
i Lasiurus_borealis.LasBor_scaffold_50988                I 305 T 33
s Lemur_catta.scaffold_24                                 15524132 10 -  30322482 GG------------------------------GGCCG----G---GG
i Lemur_catta.scaffold_24                                I 1 C 0
s Leontocebus_fuscicollis.k141_1820339                        7495  8 +     64341 aa------------------------------ag--a----g---aa
i Leontocebus_fuscicollis.k141_1820339                   T 270 I 270
s Leontocebus_illigeri.k141_3350179                           4818  8 +      4941 AA------------------------------AG--A----G---AA
i Leontocebus_illigeri.k141_3350179                      C 0 I 7
s Leontocebus_nigricollis.k141_4610752                        7536  8 +     35603 aa------------------------------ag--a----g---aa
i Leontocebus_nigricollis.k141_4610752                   T 257 I 257
s Leontopithecus_chrysomelas.k141_1519602                    28997  8 +     38576 aa------------------------------ag--a----g---aa
i Leontopithecus_chrysomelas.k141_1519602                T 216 I 216
s Leontopithecus_rosalia.k141_464620                         25694  8 +     66356 aa------------------------------ag--a----g---aa
i Leontopithecus_rosalia.k141_464620                     T 219 I 219
s Lepilemur_ankaranensis.k141_596936                         11026 10 -     23766 GG------------------------------GACCA----G---GG
i Lepilemur_ankaranensis.k141_596936                     I 1 I 1
s Lepilemur_dorsalis.k141_577674                             29087 10 +     45836 GG------------------------------GACCA----G---GG
i Lepilemur_dorsalis.k141_577674                         I 1 I 1
s Lepilemur_ruficaudatus.k141_121139                          1627 10 +     25010 GG------------------------------GGCCA----G---GG
i Lepilemur_ruficaudatus.k141_121139                     I 1 I 1
s Lepilemur_septentrionalis.k141_185316                      27023 10 +     54090 GG------------------------------GACCA----G---GG
i Lepilemur_septentrionalis.k141_185316                  I 1 I 1
s Leptonychotes_weddellii.KB714746.1                       3042853 36 +   3914936 CA--TTCTGCTTCCAATATTAAGATGTAGAATGC--A----G---AA
i Leptonychotes_weddellii.KB714746.1                     C 0 I 266
s Lepus_americanus.LepAme_scaffold_107385                     6500 35 -     14121 aaaa--gaaaaaaaaata-tggagagagggagaa--a----a---ga
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437183  8 +   1826925 aa------------------------------ag--a----g---aa
i Lophocebus_aterrimus.ctg367                            T 97 C 0
s Loris_lydekkerianus.k141_2539221                            5927 12 +     11245 GA------------------------------TG--GGGCAG---GG
i Loris_lydekkerianus.k141_2539221                       C 0 I 1
s Loris_tardigradus.ctg83                                  1004747 12 +   6120653 GA------------------------------TG--GGGCAG---GG
i Loris_tardigradus.ctg83                                C 0 I 1
s Loxodonta_africana.GL010049.1                            4217335 34 -  43346337 CA----GTCTGCTTCCAATATTAAAGATGTTAAA--A----G---AA
i Loxodonta_africana.GL010049.1                          C 0 I 60
s Lycaon_pictus.CM007581.1                                17955125 33 -  59628241 CT-----TTCTGCTTTCAATATTAAGATGTTAGC--A----G---AA
i Lycaon_pictus.CM007581.1                               C 0 I 63
s Macaca_arctoides.k141_2326796                               7093  8 +     40492 ga------------------------------aa--g----a---tg
i Macaca_arctoides.k141_2326796                          I 100 T 100
s Macaca_assamensis.Contig5                               59676352  8 +  60120075 ga------------------------------aa--g----a---tg
i Macaca_assamensis.Contig5                              I 100 T 100
s Macaca_cyclopis.k119_18836                                 12868  8 -     26193 Ga------------------------------aa--g----a---tg
i Macaca_cyclopis.k119_18836                             I 103 T 103
s Macaca_fascicularis.k141_814140                            80652  8 -    114318 ga------------------------------aa--g----a---tg
i Macaca_fascicularis.k141_814140                        I 103 T 103
s Macaca_fuscata.k119_255327                                  6339  8 -     23192 ga------------------------------aa--g----a---tg
i Macaca_fuscata.k119_255327                             I 99 T 99
s Macaca_leonina.k141_3550399                                15812  8 -     29190 ga------------------------------aa--g----a---tg
i Macaca_leonina.k141_3550399                            I 103 T 103
s Macaca_maura.k141_2733130                                  24377  8 +     37952 ga------------------------------aa--g----a---tg
i Macaca_maura.k141_2733130                              I 103 T 103
s Macaca_mulatta.NC_041758.1                             186839466  8 + 187317192 ga------------------------------aa--g----a---tg
i Macaca_mulatta.NC_041758.1                             I 103 T 103
s Macaca_nemestrina.KQ007038.1                            25458029  8 -  25927173 ga------------------------------aa--g----a---tg
i Macaca_nemestrina.KQ007038.1                           I 103 T 103
s Macaca_nigra.k141_1655396                                  80225  8 +     89720 ga------------------------------aa--g----a---tg
i Macaca_nigra.k141_1655396                              I 103 T 103
s Macaca_radiata.k141_3680011                                 7226  8 +     20474 ga------------------------------aa--g----a---tg
i Macaca_radiata.k141_3680011                            I 103 T 103
s Macaca_siberu.k141_635500                                   7026  8 -     14993 GA------------------------------Aa--g----a---tg
i Macaca_siberu.k141_635500                              I 103 T 103
s Macaca_silenus.Contig273                                  329892  8 -    668171 ga------------------------------aa--g----a---tg
i Macaca_silenus.Contig273                               I 103 T 103
s Macaca_thibetana.k99_256239                                 5339  8 -     24072 ga------------------------------aa--g----a---tg
i Macaca_thibetana.k99_256239                            I 100 T 100
s Macaca_tonkeana.k141_1498238                               25964  8 -     45290 ga------------------------------aa--g----a---tg
i Macaca_tonkeana.k141_1498238                           I 103 T 103
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90625 30 +     94391 CA--------ATCTGCTTTTAATAAGATATTAGG--A----G---AA
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 65
s Mandrillus_leucophaeus.scaffold280                      23937456  8 -  24302211 aa------------------------------ag--a----g---aa
i Mandrillus_leucophaeus.scaffold280                     T 99 C 0
s Mandrillus_sphinx.Contig270                               351584  8 +    752769 aa------------------------------ag--a----g---aa
i Mandrillus_sphinx.Contig270                            T 95 C 0
s Manis_javanica.JSZB01003497.1                              18506 33 +    737560 TA-----TTCTGCTTCCAATATTAAGATGCTAAG--A----G---AA
i Manis_javanica.JSZB01003497.1                          I 3 I 60
s Manis_pentadactyla.KN006162.1                              50495 33 -    317179 TA-----TTCTGCTTCCAATATTAAGAAGCCAAG--A----G---AA
i Manis_pentadactyla.KN006162.1                          I 3 I 60
s Marmota_marmota.CZRN01000018.1                          33103172  6 -  40650429 --------------------------------gg--a----a---ag
i Marmota_marmota.CZRN01000018.1                         I 37 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        10344 30 -    207569 CA--------GTCTGCTTTCAATAAGCTATTAGA--A----G---AA
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 54
s Mellivora_capensis.MelCap_flattened_line_69365             10053 36 +     13704 CA--TTCTACTTCCAATATTAAGATATAGAATGC--A----G---AA
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 64
s Mico_argentatus.k141_1239457                                5773  8 -      7380 aa------------------------------ag--a----g---aa
i Mico_argentatus.k141_1239457                           T 231 I 231
s Mico_humeralifer.k141_1976199                               4846  8 +     18990 aa------------------------------ag--a----g---aa
i Mico_humeralifer.k141_1976199                          C 0 I 7
s Mico_schneideri.k141_1950671                                      5785  8 -      7356 aa------------------------------ag--a----g---aa
i Mico_schneideri.k141_1950671                                 T 231 I 231
s Microcebus_murinus.CM007674.1                           18291552 10 -  93316391 gg------------------------------ggcaa----g---gg
i Microcebus_murinus.CM007674.1                          I 1 I 1
s Microgale_talazaci.MicTal_scaffold_6613                    22153 34 -    145209 TA----AATGGCTTCCAATATTACAGAGGTTAGA--A----G---AG
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 244
s Micronycteris_hirsuta.MicHir_scaffold_52381                15659 32 -     19307 CA------TTCTGATTTCAATATTAAGATATAAC--A----G---AA
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 65
s Miniopterus_natalensis.LDJU01000034.1                    1850626 25 +   8254450 CA-------------TTCTGATTTCAATATTAAG--A----G---AA
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 63
s Miniopterus_schreibersii.MinSch_scaffold_18080             34307 25 +     64694 CA-------------TTCTGATTTCAATATTAAG--A----G---AA
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 63
s Miopithecus_ogouensis.k141_534055                           9181  8 -     28506 aa------------------------------ag--a----g---aa
i Miopithecus_ogouensis.k141_534055                      T 83 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         5721 36 -      8324 CA--TTCTGCTTCCAATATTAAGATGTAGAATGC--A----G---AA
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 266
s Mirza_zaza.k141_952172                                      9097 10 -     37649 GG------------------------------GGCAA----G---GG
i Mirza_zaza.k141_952172                                 I 1 I 1
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141625 32 -    366855 CA------TTCTGATTTCAGTATAAGATATTAAG--A----G---AA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 69
s Mungos_mungo.MunMun_flattened_line_23663                   35430 33 +     37127 TA-----TTCCGTTTGCAATATTAAGATATCAAC--A----G---AA
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 65
s Murina_feae.MurFea_scaffold_85699                           6822 33 +     14753 CA-----TTCTGATTTCAATATTAAGAGATTAAG--A----G---AA
i Murina_feae.MurFea_scaffold_85699                      C 0 I 63
s Muscardinus_avellanarius.MusAve_scaffold_82313              5035  6 +     14296 --------------------------------GG--A----A---AG
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 286 C 0
s Mustela_putorius.JH418006.1                               301244 36 -  14710649 CA--TTCTGCTTCCAATATTAAGATGTAGAATGC--A----G---AA
i Mustela_putorius.JH418006.1                            C 0 I 64
s Myocastor_coypus.MyoCoy_scaffold_10123                     71323  6 -     80779 --------------------------------AA--G----A---GG
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 16 C 0
s Myotis_brandtii.KE162005.1                                280465 33 -  10118263 TG-----TTCTGATTTCAATATTAGGAGATCAAG--A----G---AG
i Myotis_brandtii.KE162005.1                             C 0 I 63
s Myotis_davidii.KB100139.1                                1587727 33 -   6019432 TG-----TTCTGATTTCAATTTTAGGAGATCAAG--A----G---AA
i Myotis_davidii.KB100139.1                              C 0 I 63
s Myotis_lucifugus.GL429869.1                              3903819 33 -   4330536 TG-----TTCTGATTTCAAAATTAGGAGATCAAG--A----G---AA
i Myotis_lucifugus.GL429869.1                            C 0 I 63
s Myotis_myotis.MyoMyo_scaffold_482318                         493 33 -       721 TG-----TTCTGATTTCAATATTAGGAGATCAAG--A----G---AA
i Myotis_myotis.MyoMyo_scaffold_482318                   C 0 T 66
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189268 34 +    196477 CA----TTCTGTTTCTGATATTAAAGATGCCAGA--A----G---GA
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 I 65
s Nasalis_larvatus.k141_413338                               15156  8 +     21681 ac------------------------------ag--a----g---aa
i Nasalis_larvatus.k141_413338                           T 107 I 107
s Neomonachus_schauinslandi.NINY01007730.1                20307200 36 +  31847680 ca--ttcTGCTTCCAATATTAAGATGTAGAATGC--A----G---AA
i Neomonachus_schauinslandi.NINY01007730.1               I 225 I 373
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149387 33 -   9404916 CA-TTCTGCTTTCAATATTAAGa-tg-tta--gc--a----a---aa
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 80
s Nycticebus_bengalensis.LG01                            102586292 11 - 196305487 GA------------------------------TG--G----TGGTGG
i Nycticebus_bengalensis.LG01                            C 0 I 1
s Nycticebus_coucang.k141_1127096                              216 11 +      2075 GA------------------------------TG--G----TGGTGG
i Nycticebus_coucang.k141_1127096                        C 0 I 1
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761646 11 + 199412804 GA------------------------------TG--G----GGGCGG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 1
s Ochotona_princeps.JH802162.1                             1363523 38 +   3988456 aaaatagagaaagaaataatggagagaagaagaa--g----a---ga
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  746933  6 +  11899542 --------------------------------aa--g----a---gg
i Octodon_degus.JH651603.1                               I 16 C 0
s Odobenus_rosmarus.KB229312.1                              506660 36 -   2017862 CA--TTCTGCTTCCAATATTAAGATGTAGAATGC--A----G---AA
i Odobenus_rosmarus.KB229312.1                           C 0 I 63
s Orycteropus_afer.OryAfe_flattened_line_144387               9853 34 -     18566 CA----GTCTGCTTCCAATATAAAAGATGTTAAA--A----T---AA
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 I 60
s Oryctolagus_cuniculus.CM000791.1                        67147381 33 + 174332312 aaaa--ga-aaa-aaata-tggagagagggagaa--a----a---ga
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462355 28 -    559221 CA-----TTCTGCTTTCAATATTAAGATGTTAG--------------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 65
s Otolemur_crassicaudatus.k141_222918                         4211  3 +      8798 GA------------------------------T--------------
i Otolemur_crassicaudatus.k141_222918                    C 0 I 3
s Otolemur_garnettii.GL873799.1                             696374  3 -   1103335 GA------------------------------T--------------
i Otolemur_garnettii.GL873799.1                          C 0 I 3
s Pan_paniscus.KQ411613.1                                    44110  8 +     80009 aa------------------------------ag--a----g---aa
i Pan_paniscus.KQ411613.1                                T 113 I 113
s Pan_troglodytes.NBAG03001836.1                             30035  8 +     51860 aa------------------------------ag--a----g---aa
i Pan_troglodytes.NBAG03001836.1                         I 3 I 7
s Panthera_onca.PanOnc_flattened_line_3271                  151180 33 +    230217 TA-----TTCTGCTTCCAATATTAAGATGTCTAC--A----G---AA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 48
s Panthera_pardus.KV860321.1                                264389 33 +  18783137 TA-----TTCTGCTTCCAATATTAAGAGGTCTAC--A----G---AA
i Panthera_pardus.KV860321.1                             C 0 I 48
s Panthera_tigris.KE722367.1                               4721268 33 -   8748460 TA-----TTCTTCTTCCAATATTAAGATGTCTAC--A----G---AA
i Panthera_tigris.KE722367.1                             C 0 I 48
s Papio_anubis.CM001495.2                                183443206  8 + 183742232 aa------------------------------ag--a----g---aa
i Papio_anubis.CM001495.2                                T 151 C 0
s Papio_cynocephalus.k141_4307930                             6904  8 +     20448 aa------------------------------ag--a----g---aa
i Papio_cynocephalus.k141_4307930                        T 99 C 0
s Papio_hamadryas.Contig39                                20563712  8 +  20919399 aa------------------------------ag--a----g---aa
i Papio_hamadryas.Contig39                               T 103 C 0
s Papio_kindae.k141_1936966                                   5648  8 +     41871 aa------------------------------ag--a----g---aa
i Papio_kindae.k141_1936966                              T 99 C 0
s Papio_papio.k141_802527                                     8933  8 +     27711 aa------------------------------ag--a----g---aa
i Papio_papio.k141_802527                                T 107 C 0
s Papio_ursinus.k141_3428135                                  9014  8 +      9205 aa------------------------------ag--a----g---aa
i Papio_ursinus.k141_3428135                             T 95 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12662 33 -     78924 TA-----TCCCATTTCCAATATTAAGATGTCAAC--A----G---AA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 63
s Perodicticus_ibeanus.k141_855320                           10181 10 +     13100 AA------------------------------TG--GG--AG---GG
i Perodicticus_ibeanus.k141_855320                       C 0 I 1
s Perodicticus_potto.k141_1092580                             8587 10 +     25941 AA------------------------------TG--GG--AG---GG
i Perodicticus_potto.k141_1092580                        C 0 I 1
s Petromus_typicus.PetTyp_scaffold_42190                     28204  6 -     29689 --------------------------------GT--G----A---GG
i Petromus_typicus.PetTyp_scaffold_42190                 I 14 C 0
s Piliocolobus_badius.k141_1234363                           43667  8 +     62158 aa------------------------------ag--a----g---ag
i Piliocolobus_badius.k141_1234363                       T 87 I 87
s Piliocolobus_gordonorum.k141_381342                        38398  8 +     89929 aa------------------------------ag--a----g---ag
i Piliocolobus_gordonorum.k141_381342                    T 103 I 103
s Piliocolobus_kirkii.k141_448987                            39814  8 +     51399 aa------------------------------ag--a----g---ag
i Piliocolobus_kirkii.k141_448987                        T 103 I 103
s Piliocolobus_tephrosceles.PDMG02000141.1                14296052  8 -  14605196 aa------------------------------ag--a----g---ag
i Piliocolobus_tephrosceles.PDMG02000141.1               T 103 I 103
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1790  6 +     22620 --------------------------------AG--A----G---AA
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 23 I 63
s Pongo_abelii.CM009266.2                                189131152  8 + 189387572 aa------------------------------ag--a----g---aa
i Pongo_abelii.CM009266.2                                T 109 C 0
s Pongo_pygmaeus.ctg66                                     9570760  8 +   9816681 aa------------------------------ag--a----g---aa
i Pongo_pygmaeus.ctg66                                   T 108 C 0
s Presbytis_comata.k141_677006                               73336  8 -     81375 ac------------------------------ag--g----g---aa
i Presbytis_comata.k141_677006                           T 103 I 103
s Presbytis_mitrata.k141_1087752                              5156  8 +     19060 AC------------------------------AG--g----g---aa
i Presbytis_mitrata.k141_1087752                         T 103 I 103
s Procavia_capensis.ProCapCap_scaffold_85530                 13390  1 -     22811 ----------------------------------------------A
i Procavia_capensis.ProCapCap_scaffold_85530             I 28 I 60
s Prolemur_simus.MPIZ01000396.1                            2596812 10 -   4620579 gg------------------------------ggctg----g---gg
i Prolemur_simus.MPIZ01000396.1                          I 1 C 0
s Propithecus_coquerelli.NW_012148875.1                     990793 10 +   2598838 GG------------------------------ggcca----g---gg
i Propithecus_coquerelli.NW_012148875.1                  I 1 I 1
s Propithecus_coronatus.k141_347390                          29105 10 +     38485 GG------------------------------GGCCA----G---GG
i Propithecus_coronatus.k141_347390                      I 1 I 1
s Propithecus_diadema.k141_58108                              1148 10 -     13098 GG------------------------------GGCCA----G---GG
i Propithecus_diadema.k141_58108                         I 1 I 1
s Propithecus_edwardsi.k141_1176054                          26626 10 +     35766 GG------------------------------GGCCA----G---GG
i Propithecus_edwardsi.k141_1176054                      I 1 I 1
s Propithecus_perrieri.k141_1200571                           4813 10 -     24134 GG------------------------------GGCCA----G---GG
i Propithecus_perrieri.k141_1200571                      I 1 I 1
s Propithecus_tattersalli.k141_790011                        28638 10 -     67325 GG------------------------------GGCCA----G---GG
i Propithecus_tattersalli.k141_790011                    I 1 I 1
s Propithecus_verreauxi.k141_956661                           4861 10 -      6182 GG------------------------------GGCCA----G---GG
i Propithecus_verreauxi.k141_956661                      I 1 I 1
s Pteronotus_parnellii.KE909381.1                            15078 33 -     21811 CA-----TTCTGATTTTAATATTAAGCTATTAAG--A----G---AA
i Pteronotus_parnellii.KE909381.1                        C 0 I 67
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40243 36 +     42204 CA--TTCTGCTTCCAATACTAAGATGTAGAATGC--A----G---AA
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 64
s Pteropus_alecto.KB030862.1                              22976793 30 +  28871421 CA--------TTCTGCTTTTAATAAGATATTAGG--A----G---AA
i Pteropus_alecto.KB030862.1                             C 0 I 63
s Pteropus_vampyrus.KN534172.1                                6846 30 -      8028 CA--------TTCTGCTTTTAATAAGATATTAGG--A----G---AA
i Pteropus_vampyrus.KN534172.1                           C 0 I 63
s Puma_concolor.QAVW01001104.1                            20274334 33 -  38429054 TG-----TTCTGCTTCCAATATTAACATGTTGAC--A----G---AA
i Puma_concolor.QAVW01001104.1                           C 0 I 48
s Pygathrix_cinerea.k141_1153803                             15165  8 -     91421 ac------------------------------ag--a----g---aa
i Pygathrix_cinerea.k141_1153803                         T 107 I 107
s Pygathrix_nigripes_b.ctg100                                 7609285  8 +   7812017 ac------------------------------ag--a----g---aa
i Pygathrix_nigripes_b.ctg100                               T 107 I 107
s Pygathrix_nigripes_a.k141_215492                             15137  8 -     72585 ac------------------------------ag--a----g---aa
i Pygathrix_nigripes_a.k141_215492                         T 107 I 107
s Rhinopithecus_bieti.k119_217274                             6851  8 -     11128 ac------------------------------ag--a----g---aa
i Rhinopithecus_bieti.k119_217274                        T 106 I 106
s Rhinopithecus_roxellana.NC_044550.1                     91236204  8 - 195417433 ac------------------------------ag--a----g---aa
i Rhinopithecus_roxellana.NC_044550.1                    T 100 I 100
s Rhinopithecus_strykeri.ctg102                            7671856  8 +   7961872 ac------------------------------ag--a----g---aa
i Rhinopithecus_strykeri.ctg102                          T 106 I 106
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87814 30 -     96226 CA--------TTCTGCTTTTAATAAGATATTAGG--A----G---AA
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 64
s Saguinus_bicolor.k141_2619299                               8172  8 -      8359 aa------------------------------ag--a----c---aa
i Saguinus_bicolor.k141_2619299                          I 3 I 7
s Saguinus_imperator.k141_2524406                             2130  8 +      2197 aa------------------------------ag--a----g---aa
i Saguinus_imperator.k141_2524406                        C 0 I 7
s Saguinus_inustus.k141_699149                               13549  8 +     13640 aa------------------------------ag--a----g---aa
i Saguinus_inustus.k141_699149                           C 0 I 7
s Saguinus_labiatus.k141_285685                               8418  8 +      8564 aa------------------------------ag--a----g---aa
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469268  8 + 209938924 aa------------------------------ag--a----c---aa
i Saguinus_midas.LG03                                    T 464 I 464
s Saguinus_mystax.k141_374627                                 7974  8 -      9399 aa------------------------------ag--a----g---aa
i Saguinus_mystax.k141_374627                            T 393 I 393
s Saimiri_boliviensis.NW_024100920.1                     119951109  8 - 121099817 ga------------------------------aa--g----a---ta
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23448  8 +     46362 ga------------------------------aa--g----a---ta
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               23543  8 +     45824 ga------------------------------aa--g----a---ta
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             40222  8 -     64574 ga------------------------------aa--g----a---ta
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               3294  8 -     23631 ga------------------------------aa--g----a---ta
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 23446  1 -     61129 ----------------------------------------------a
i Saimiri_ustus.k141_1484609                             I 113 C 0
s Sapajus_apella.ctg103                                    5420656  8 -   5703754 aa------------------------------gg--a----g---aa
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          55697  8 -     80660 aa------------------------------gg--a----g---aa
i Sapajus_macrocephalus.k141_351809                      C 0 I 353
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153224 33 -    313613 GA-----TTCTGCTCCCAATACAAAGATGTTTAT--A----G---AA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 71
s Semnopithecus_entellus.k141_11662                          19676  8 -     19888 AC------------------------------AG--A----G---AA
i Semnopithecus_entellus.k141_11662                      C 0 I 5
s Semnopithecus_hypoleucos.k141_1615806                      26879  8 +     39453 ac------------------------------ag--a----g---aa
i Semnopithecus_hypoleucos.k141_1615806                  T 107 I 107
s Semnopithecus_johnii.k141_670120                            7398  8 +     27826 ac------------------------------ag--a----g---aa
i Semnopithecus_johnii.k141_670120                       T 106 I 106
s Semnopithecus_priam.k141_638794                             6919  8 -     19483 ac------------------------------ag--a----g---aa
i Semnopithecus_priam.k141_638794                        T 107 I 107
s Semnopithecus_schistaceus.k141_1584426                      6987  8 +      7198 AC------------------------------AG--A----G---AA
i Semnopithecus_schistaceus.k141_1584426                 I 3 I 5
s Semnopithecus_vetulus.k141_1200928                         15245  8 +     15514 ac------------------------------ag--a----g---aa
i Semnopithecus_vetulus.k141_1200928                     I 3 I 7
s Solenodon_paradoxus.SolPar_flattened_line_126               3784 30 +   1910179 CG--------CTCTGAATGCAATGTGAAGTTGAG--A----A---AA
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 63
s Sorex_araneus.JH798187.1                                13651030 26 -  18376816 CA------------TTCTTCCATTATTAGCATGA--A----A---AG
i Sorex_araneus.JH798187.1                               C 0 I 93
s Spermophilus_dauricus.KZ294078.1                         1954027  6 -   3870691 --------------------------------gg--a----a---ag
i Spermophilus_dauricus.KZ294078.1                       I 37 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30744 36 +     97271 CA--TTCTGCTTCCAATATTCAGATGTAGAATGC--A----G---AA
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 65
s Suricata_suricatta.SurSur_flattened_line_6629              18331 32 -    196729 CA------TTCCGCTGCAATATTAAGATATCAAC--A----G---AA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 68
s Sus_scrofa.CM000828.4                                    6810506 33 +  69701581 TA-----TTCTGCTTCCAATACAAACATGTTAAA--A----G---AA
i Sus_scrofa.CM000828.4                                  C 0 I 329
s Tadarida_brasiliensis.TadBra_scaffold_25820                10807 33 +     41958 CA-----TTCTGATTTCAATATTAAGATGTTAAG--A----G---AA
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 60
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72629 34 +    116680 CA----TTCTGTTTCTGATATTAAAGATGCCAGA--A----G---GA
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 I 65
s Tapirus_indicus.TapInd_scaffold_9301                      118761 33 -    156842 CA-----TTCTGCTTCCAACATTAAGATGTTAAG--T----G---AA
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 64
s Tapirus_terrestris.TapTer_scaffold_755                    387218 33 +    539355 CA-----TTCTGCTTCCAATATTAAGATGTTAAG--C----A---AA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 64
s Tarsius_lariang.k141_2201908                               26427  8 +     70052 ga------------------------------ag--g----a---ag
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1260  8 -     16117 GA------------------------------AG--G----A---ag
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428576  8 + 186847797 aa------------------------------ag--a----g---aa
i Theropithecus_gelada.CM009954.1                        T 99 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105524  6 +    114563 --------------------------------CT--G----A---GG
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 16 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   6412 33 +      8208 CA----TCCTGTTTCTGATATTAAAGATGCCAG---G----G---AA
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 I 65
s Tonatia_saurophila.TonSau_scaffold_294                     81200 33 +    610378 CA-----TTCTGATTTCAGTATTAAGATACTAAG--A----G---AA
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 64
s Trachypithecus_auratus.k141_722599                         10970  8 -     20410 ac------------------------------ag--a----g---aa
i Trachypithecus_auratus.k141_722599                     T 107 I 107
s Trachypithecus_crepusculus.k141_582567                        84  8 -     12674 ac------------------------------ag--a----g---aa
i Trachypithecus_crepusculus.k141_582567                 T 107 I 107
s Trachypithecus_cristatus.k141_580354                       11071  8 +     19930 ac------------------------------ag--a----g---aa
i Trachypithecus_cristatus.k141_580354                   T 107 I 107
s Trachypithecus_francoisi.k141_1412647                       7498  8 -     19997 ac------------------------------ag--a----g---aa
i Trachypithecus_francoisi.k141_1412647                  T 91 I 91
s Trachypithecus_geei.k141_277701                            47622  8 -     60166 ac------------------------------ag--a----g---aa
i Trachypithecus_geei.k141_277701                        T 106 I 106
s Trachypithecus_germaini.k141_912491                        15093  8 -     27529 ac------------------------------ag--a----g---aa
i Trachypithecus_germaini.k141_912491                    T 107 I 107
s Trachypithecus_hatinhensis.k141_143409                     15037  8 -     18194 ac------------------------------ag--a----g---aa
i Trachypithecus_hatinhensis.k141_143409                 T 107 I 107
s Trachypithecus_laotum.k141_907409                           8765  8 -     21137 ac------------------------------ag--a----g---aa
i Trachypithecus_laotum.k141_907409                      T 91 I 91
s Trachypithecus_leucocephalus.k141_587342                    7468  8 -     10723 ac------------------------------ag--a----g---aa
i Trachypithecus_leucocephalus.k141_587342               T 91 I 91
s Trachypithecus_melamera.k141_434728                         6624  8 +      9834 ac------------------------------ag--a----g---aa
i Trachypithecus_melamera.k141_434728                    T 107 I 107
s Trachypithecus_obscurus.k141_190785                        24937  8 +     32220 ac------------------------------ag--a----g---aa
i Trachypithecus_obscurus.k141_190785                    T 107 I 107
s Trachypithecus_phayrei.ctg124                            5939039  8 +   6242583 ac------------------------------ag--a----g---aa
i Trachypithecus_phayrei.ctg124                          T 107 I 107
s Trachypithecus_pileatus.k141_2007326                        8291  8 +     20839 ac------------------------------ag--a----g---aa
i Trachypithecus_pileatus.k141_2007326                   T 106 I 106
s Trichechus_manatus.JH594705.1                            4293289  1 +  10818551 ----------------------------------------------A
i Trichechus_manatus.JH594705.1                          I 28 I 60
s Tupaia_chinensis.KB320699.1                              2155875 30 +   4065304 ga--gggactagga-ggaa-g-ag-gagga--ag--t----a---tg
i Tupaia_chinensis.KB320699.1                            I 206 T 215
s Tupaia_tana.TupTan_flattened_line_97126                     9320  2 -     10553 GA---------------------------------------------
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 21
s Uropsilus_gracilis.UroGra_scaffold_12083                   53329 33 -     77625 GA-----TTCTGCTTCAAACATAAAGATGTTCAT--A----A---AA
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 63
s Ursus_maritimus.KK499267.1                               4850449 31 -   5085361 TA-------TTCTGCTTCTTAAGATGTAGAATGT--A----G---AA
i Ursus_maritimus.KK499267.1                             C 0 I 63
s Varecia_rubra.k141_590885                                  11472 10 +     50397 GG------------------------------GGCTG----G---GG
i Varecia_rubra.k141_590885                              I 1 C 0
s Varecia_variegata.k141_1128296                             11531 10 +     24756 GG------------------------------GGCTG----G---GG
i Varecia_variegata.k141_1128296                         I 1 C 0
s Vicugna_pacos.KN270157.1                                 5371914  3 -   5488506 -----------------------------------------G---AA
i Vicugna_pacos.KN270157.1                               I 27 I 68
s Vulpes_lagopus.VulLag_flattened_line_30954                 10800 33 -     43706 CA-----TTCTGCTTTCAATATTAAGATGTTAGC--A----G---AA
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 63
s Xerus_inauris.XerIna_scaffold_2302                          1167  6 +    224448 --------------------------------gg--g----a---gg
i Xerus_inauris.XerIna_scaffold_2302                     I 37 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          5373 36 +     86975 CA--TTCTGATTCCAATATTAAGATGTATAATGC--A----G---AA
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 63
e Mus_pahari.LT608297.1                                   31355110  4 -  89631738 I
e Mus_spretus.CM004101.1                                  90752512  4 - 130317789 I
e Mus_musculus.chr8                                       87650451  4 - 129401213 I
e Mus_caroli.LT608237.1                                   84361453  4 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      14994  0 +     63895 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Sigmodon_hispidus.SigHis_scaffold_42075                      411  4 -     30804 I
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570713  4 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Psammomys_obesus.NESX01036370.1                            10483  4 -     21651 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Peromyscus_maniculatus.KI615324.1                       18194865  4 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80239  4 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   25239  4 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Nannospalax_galili.KL204047.1                            2034163  2 -   3037898 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11260571  4 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182333  4 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 32827 16 +    140813 I
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276898  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Ellobius_talpinus.LOJH01081419.1                             523  4 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          20392  4 -    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cricetulus_griseus.LT883664.1                           11667658  4 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 50291  2 +     63868 I
e Colobus_guereza.LG01                                   199948958  0 + 200372422 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74597  0 -     89534 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     70877 18 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       6770  7 +     62944 a--a---------------a-------------a----g----aa
s Acinonyx_jubatus.LLWD01001279.1                           827408  3 -   1699592 a--a---------------a-------------------------
i Acinonyx_jubatus.LLWD01001279.1                        I 48 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510682  3 -  29979442 a--a---------------a-------------------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 63 C 0
s Ailurus_fulgens.LNAC01001112.1                             79458  3 -    347723 a--a---------------a-------------------------
i Ailurus_fulgens.LNAC01001112.1                         I 64 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14699  7 -     52922 a--a---------------a-------------a----g----ga
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         14635  7 -     28001 a--a---------------a-------------a----g----ga
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          5131  7 -     18505 a--a---------------a-------------a----g----ga
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           5985  7 -     12518 a--a---------------a-------------a----g----ga
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              7647 20 +     51355 a--aa-tgaag-gagaaaga-------------a----a----ga
i Alouatta_belzebul.k141_3560514                         I 184 T 197
s Alouatta_caraya.k141_1701091                                 755 20 -     36483 a--aa-tgaag-gagaaaga-------------a----a----ga
i Alouatta_caraya.k141_1701091                           I 170 T 183
s Alouatta_discolor.k141_566626                              11207 20 +     28687 a--aa-tgaag-gagaaaga-------------a----a----ga
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1509701                                25031 20 +     25266 a--aa-tgaag-gagaaaga-------------a----a----ga
i Alouatta_juara.k141_1509701                            C 0 T 194
s Alouatta_macconnelli.k141_918386                             752 20 -      9457 a--aa-tgaag-gagaaaga-------------a----a----ga
i Alouatta_macconnelli.k141_918386                       I 173 C 0
s Alouatta_nigerrima.k141_3472759                            18338 20 -     18578 a--aa-tgaag-gagaaaga-------------a----a----ga
i Alouatta_nigerrima.k141_3472759                        I 181 T 194
s Alouatta_palliata.k141_2135620                              3722 20 +     47717 a--aa-tgaag-gagaaaga-------------a----a----ga
i Alouatta_palliata.k141_2135620                         I 178 T 191
s Alouatta_puruensis.k141_362188                               434 20 +      5663 a--aa-tgaag-gagaaaga-------------a----a----ga
i Alouatta_puruensis.k141_362188                         C 0 T 198
s Alouatta_seniculus.k141_117119                             14886 20 +     50774 A--A--ATGAAGGAGAAATA-------------A----A----GA
i Alouatta_seniculus.k141_117119                         I 18 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185450  7 +    412891 T--A---------------A-------------G----G----AA
i Anoura_caudifer.AnoCau_scaffold_1412                   I 64 C 0
s Aotus_azarae.k141_3104676                                  15489  4 -     33861 ---------------------------------a----g----aa
i Aotus_azarae.k141_3104676                              I 3 C 0
s Aotus_griseimembra.k141_2240599                            15509  4 -     34016 ---------------------------------a----g----aa
i Aotus_griseimembra.k141_2240599                        I 3 C 0
s Aotus_nancymaae.KZ198451.1                               4297906  4 -   5030052 ---------------------------------a----g----aa
i Aotus_nancymaae.KZ198451.1                             I 3 C 0
s Aotus_trivirgatus.k141_2152450                             15511  4 -     34685 ---------------------------------a----g----aa
i Aotus_trivirgatus.k141_2152450                         I 3 C 0
s Aotus_vociferans.k141_344750                               28635  4 -     47192 ---------------------------------a----g----aa
i Aotus_vociferans.k141_344750                           I 3 C 0
s Arctocebus_calabarensis.k141_2318572                       11557  4 +     14667 ---------------------------------G----T----GA
i Arctocebus_calabarensis.k141_2318572                   I 1 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      12705  1 +     20879 G--------------------------------------------
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 8
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4858  7 +     43469 G--A---------------A-------------G----A----AA
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 63 C 0
s Avahi_laniger.k141_765380                                  53760  7 -     92717 G--A---------------G-------------A----G----AA
i Avahi_laniger.k141_765380                              I 1 C 0
s Avahi_peyrierasi.k141_1424874                              54387  7 +     85213 G--A---------------G-------------A----G----AA
i Avahi_peyrierasi.k141_1424874                          I 1 C 0
s Callibella_humilis.k141_1278103                             5498 14 -     10423 a--a---------------atgaaggaga----a----a------
i Callibella_humilis.k141_1278103                        I 257 T 264
s Callimico_goeldii.k141_1091182                             24966 20 +     31915 a--a---------------atgaa--aga--gaa----agaaaga
i Callimico_goeldii.k141_1091182                         I 254 T 267
s Callithrix_geoffroyi.k119_512088                            5207  7 +      5267 a--a---------------a-------------a----g----aa
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590652 14 - 189096842 a--a---------------atgaaggaga----a----a------
i Callithrix_jacchus.pat_scaffold_3                      I 231 T 238
s Callithrix_kuhlii.k119_1164682                             11952  7 -     12001 A--A---------------A-------------A----G----AA
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002485  7 -  17673402 a--a---------------a-------------g----g----ca
i Camelus_bactrianus.KN276810.1                          I 68 C 0
s Camelus_dromedarius.KN272107.1                           2334943  7 -   7040546 a--a---------------a-------------g----g----ca
i Camelus_dromedarius.KN272107.1                         I 68 C 0
s Camelus_ferus.KB017975.1                                  403226  7 -   1652518 a--a---------------a-------------g----g----ca
i Camelus_ferus.KB017975.1                               I 68 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    185330  3 -    185531 A--A---------------A-------------------------
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 63 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034716  3 -   9314153 a--a---------------a-------------------------
i Canis_lupus_dingo.QKWQ01000480.1                       I 63 C 0
s Canis_lupus_familiaris.chr16                            17958981  3 -  59632846 a--a---------------a-------------------------
i Canis_lupus_familiaris.chr16                           I 63 C 0
s Canis_lupus_orion.HG994398.1                            18500493  3 +  63665305 a--a---------------a-------------------------
i Canis_lupus_orion.HG994398.1                           I 63 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1143  6 -     12242 G--G---------------T-------------A----A----A-
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 5
s Carlito_syrichta.NW_007247396.1                           201428  7 +    308752 g--a---------------a-------------g----g----aa
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5212  7 -     11696 T--A---------------A-------------G----G----AA
i Carollia_perspicillata.CarPer_scaffold_92756           I 59 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137160  6 +    179628 A--G---------------G-------------G----A----A-
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     93121  8 +    217609 T--A---------------A------------GG----A----AA
i Catagonus_wagneri.CatWag_scaffold_2839                 I 74 C 0
s Cebuella_niveiventris.k141_1251222                         10133 14 -     11392 a--a---------------atgaaggaga----a----a------
i Cebuella_niveiventris.k141_1251222                     I 267 T 274
s Cebuella_pygmaea.k141_1309012                               6201 14 -      7577 a--a---------------atgaaggaga----a----a------
i Cebuella_pygmaea.k141_1309012                          I 237 T 244
s Cebus_albifrons.Contig27                                25652859 20 +  26074798 g--a---gg-g--------agggag-agaa-g-a----a----gg
i Cebus_albifrons.Contig27                               I 867 T 448
s Cebus_olivaceus.k141_1764483                                 804 19 +     28840 a--aa----tg--------a--a-ggagaaag-a----a----ag
i Cebus_olivaceus.k141_1764483                           n 5 I 3
s Cebus_unicolor.k141_1837183                                  533 16 +     14051 a--a---------------a--a-ggaaaaag-a----a----ag
i Cebus_unicolor.k141_1837183                            n 5 I 2
s Cephalopachus_bancanus.k141_1423433                         5433  7 +     31688 g--a---------------a-------------g----g----aa
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12231539  7 +  27778364 A--A---------------A-------------C----G----AA
i Ceratotherium_simum.JH767749.1                         I 64 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2566  7 -     25243 A--A---------------A-------------C----G----AA
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 64 C 0
s Cercocebus_atys.KQ010504.1                               4475644  7 +   4669795 a--a---------------a-------------a----g----ga
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        14189  7 -     19203 a--a---------------a-------------a----g----ga
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3342297                            805  7 -     14043 a--a---------------a-------------a----g----ga
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           8841  7 +     27781 a--a---------------a-------------a----g----ga
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         9006  7 -     20310 a--a---------------a-------------a----g----ga
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          11985  7 +     29689 a--a---------------a-------------a----g----ga
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            6739  7 -     20078 a--a---------------a-------------a----g----ga
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          14662  7 -     27936 a--a---------------a-------------a----g----ga
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            3526  7 -     17152 a--a---------------a-------------a----g----ga
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38817065  7 +  39242232 a--a---------------a-------------a----g----ga
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222757  7 -  21565898 a--a---------------a-------------a----g----ga
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       39875  7 -     53127 a--a---------------a-------------a----g----ga
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                         126  7 +     13442 a--a---------------a-------------a----g----ga
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14675  7 -     27947 a--a---------------a-------------a----g----ga
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         14651  7 +     17596 a--a---------------a-------------a----g----ga
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                           698  7 +     14005 a--a---------------a-------------a----g----ga
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             637  4 -      8501 A--A---------------A-------------A-----------
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       I 65 I 8
s Cheirogaleus_major.k141_333249                             21140  7 -     52598 G--A---------------G-------------A----G----AA
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16505  7 +     57038 g--a---------------g-------------a----g----aa
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1252891  6 +   2543920 g--g---------------t-------------g----g----a-
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2206961                            395 20 -     15524 a--a---------------atgaaggagaaagaa----a----ga
i Chiropotes_albinasus.k141_2206961                      I 8 T 239
s Chlorocebus_aethiops.ctg25                              18428635  7 -  18827391 a--a---------------a-------------a----g----ga
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15072  7 -     50209 a--a---------------a-------------a----g----ga
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422072  7 + 135778131 a--a---------------a-------------a----g----ga
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 18417  4 +     19366 A--A---------------A-------------A-----------
i Choloepus_didactylus.ChoDid_scaffold_45914             I 65 I 8
s Choloepus_hoffmanni.KN194906.1                            173493  4 +    839153 a--a---------------a-------------a-----------
i Choloepus_hoffmanni.KN194906.1                         I 65 I 9
s Colobus_angolensis.KN981557.1                            1910680  7 +   2368649 a--a---------------a-------------a----g----aa
i Colobus_angolensis.KN981557.1                          I 103 T 103
s Colobus_polykomos.k141_906115                              37214  7 +     84244 a--a---------------a-------------a----g----aa
i Colobus_polykomos.k141_906115                          I 103 T 103
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14515  4 -     20389 A--G---------------A-------------A-----------
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 73 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28595  3 -     87169 A--A---------------A-------------------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 64 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837165  6 +   1526836 A--C---------------T-------------G----G----A-
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35850  6 +     51376 G--A---------------C-------------T----A----A-
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            63644  4 +   2246927 a--a---------------a-------------a-----------
i Dasypus_novemcinctus.JH564415.1                        I 65 I 8
s Daubentonia_madagascariensis.ctg71                      12537356  7 -  12879189 G--A---------------G-------------A----G----AA
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630224  7 +  20541912 t--a---------------a-------------g----g----aa
i Desmodus_rotundus.KZ672289.1                           I 58 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673390  7 +   1390856 A--A---------------a-------------c----g----aa
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 64 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6142  7 +    198055 A--A---------------A-------------C----G----AA
i Diceros_bicornis.DicBicMic_scaffold_5955               I 64 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36485  6 +     67921 G--G---------------T-------------G----G----A-
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Echinops_telfairi.JH980293.1                            48780683  6 + 111700974 a--t-----t-t-------t-------------c-----------
i Echinops_telfairi.JH980293.1                           I 243 I 3
s Eidolon_helvum.KE759718.1                                  10627  7 +     11740 a--a---------------a-------------a----g----ga
i Eidolon_helvum.KE759718.1                              I 63 C 0
s Elephantulus_edwardii.JH947257.1                         1097772  5 +  10337057 a--g-----t---------a-------------t-----------
i Elephantulus_edwardii.JH947257.1                       I 56 I 3
s Enhydra_lutris.KZ291758.1                               16329416  3 -  41312741 a--a---------------a-------------------------
i Enhydra_lutris.KZ291758.1                              I 64 C 0
s Eptesicus_fuscus.JH977646.1                              2145821  7 -  14770903 a--a---------------a-------------g----g----aa
i Eptesicus_fuscus.JH977646.1                            I 63 C 0
s Equus_asinus.JREZ01000139.1                              1283644  7 +   4378816 a--t---------------a-------------g----g----aa
i Equus_asinus.JREZ01000139.1                            I 60 C 0
s Equus_caballus.CM000403.2                               18531464  7 -  39960074 a--t---------------a-------------g----g----aa
i Equus_caballus.CM000403.2                              I 59 C 0
s Equus_przewalskii.KK951119.1                               33493  7 +    498745 a--t---------------a-------------g----g----aa
i Equus_przewalskii.KK951119.1                           I 60 C 0
s Erythrocebus_patas.Contig38                             21205242  7 -  21539334 a--a---------------a-------------a----g----ga
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13862  7 -     14127 A--A---------------G-------------A----G----AA
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6565  7 -     16928 A--A---------------G-------------A----G----AA
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15589  7 -     25546 A--A---------------G-------------A----G----AA
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12793  7 +     26330 a--a---------------g-------------a----g----aa
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14028  7 +     23973 A--A---------------G-------------A----G----AA
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12790  7 +     75513 a--a---------------g-------------a----g----aa
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10720  7 +     97555 a--a---------------g-------------a----g----aa
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              211  7 +     13026 a--a---------------g-------------a----g----aa
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4264  7 -     17153 A--A---------------G-------------A----G----AA
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13837  7 +    111500 A--A---------------G-------------A----G----AA
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237059  3 + 206538554 a--a---------------a-------------------------
i Felis_catus.CM001381.2                                 I 48 C 0
s Felis_catus_fca126.CM031415.1                           20195902  3 + 205367284 a--a---------------a-------------------------
i Felis_catus_fca126.CM031415.1                          I 48 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  9646  3 -     36744 A--A---------------A-------------------------
i Felis_nigripes.FelNig_flattened_line_20823             I 48 C 0
s Fukomys_damarensis.KN121974.1                             850519  6 +   3816255 a--g---------------t-------------a----g----a-
i Fukomys_damarensis.KN121974.1                          C 0 I 5
s Galago_moholi.ctg2040                                     426688  7 -    453645 G--G---------------G-------------G----T----GA
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4378  7 +     11339 G--G---------------G-------------G----T----ga
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            1690  7 +     41679 G--G---------------G-------------G----T----GA
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1259  7 -      9135 g--a---------------a-------------g----g----aa
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            31452  6 +     49224 gaaa---------------T-------------G-----------
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              16142  7 -     32273 a--a---------------a-------------a----g----aa
i Gorilla_beringei.k141_3596273                          I 117 T 117
s Gorilla_gorilla.LT578341.1                             186338279  7 + 186649187 a--a---------------a-------------a----g----aa
i Gorilla_gorilla.LT578341.1                             I 108 T 108
s Graphiurus_murinus.GraMur_scaffold_10447                   32693  6 +     78134 GAAA---------------T-------------A-----------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 5
s Hapalemur_alaotrensis.k141_170648                           6901  7 -     19426 A--A---------------G-------------A----G----AA
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12050  7 -     15286 A--A---------------G-------------A----G----AA
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13689  7 +     18253 a--a---------------g-------------a----g----aa
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13790  7 -     41752 A--A---------------G-------------A----G----AA
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13627  7 -     16460 A--A---------------G-------------A----G----AA
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242428  3 +    327341 A--A---------------A-------------------------
i Helogale_parvula.HelPar_flattened_line_2585            I 64 C 0
s Heterocephalus_glaber.JH602082.1                        20662308  6 +  22651954 a--g---------------t-------------a----g----a-
i Heterocephalus_glaber.JH602082.1                       C 0 I 5
s Heterohyrax_brucei.HetBruBak_scaffold_122365                 996  4 +      7595 T--T---------------T-------------C-----------
i Heterohyrax_brucei.HetBruBak_scaffold_122365           I 60 I 3
s Hoolock_leuconedys.ctg274                                    434947  7 +    630532 a--a---------------a-------------a----g----aa
i Hoolock_leuconedys.ctg274                                 I 110 T 110
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45122  3 +     55795 A--A---------------A-------------------------
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 64 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83197  6 +    135385 G--G---------------T-------------G----G----A-
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7520978  4 -   7955117 a--a---------------g-------------g-----------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   22581  7 +     31101 g--a---------------g-------------a----g----aa
i Indri_indri.k141_3655594                               I 1 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    16469  7 -     42476 A--A---------------A-------------A----G----AA
i Lasiurus_borealis.LasBor_scaffold_32767                I 2328 C 0
s Lemur_catta.scaffold_24                                 15524142  7 -  30322482 A--A---------------G-------------A----G----AA
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7773 20 +     64341 a--a---------------atgaaggaga----aagaaa----ga
i Leontocebus_fuscicollis.k141_1820339                   I 270 T 283
s Leontocebus_illigeri.k141_1304848                            113 20 -     35062 a--a---------------aTGaaggaga----aagaaa----ga
i Leontocebus_illigeri.k141_1304848                      n 7 I 2
s Leontocebus_nigricollis.k141_4610752                        7801 20 +     35603 a--a---------------atgaaggaga----aagaaa----ga
i Leontocebus_nigricollis.k141_4610752                   I 257 T 270
s Leontopithecus_chrysomelas.k141_1519602                    29221 16 +     38576 a--a---------------atgaag--------a----agaaaga
i Leontopithecus_chrysomelas.k141_1519602                I 216 T 225
s Leontopithecus_rosalia.k141_464620                         25921 16 +     66356 a--a---------------atgaag--------a----agaaaga
i Leontopithecus_rosalia.k141_464620                     I 219 T 228
s Lepilemur_ankaranensis.k141_596936                         11037  6 -     23766 ---A---------------G-------------A----G----AA
i Lepilemur_ankaranensis.k141_596936                     I 1 C 0
s Lepilemur_dorsalis.k141_577674                             29098  6 +     45836 ---A---------------G-------------A----G----AA
i Lepilemur_dorsalis.k141_577674                         I 1 C 0
s Lepilemur_ruficaudatus.k141_121139                          1638  6 +     25010 ---A---------------G-------------A----G----AA
i Lepilemur_ruficaudatus.k141_121139                     I 1 C 0
s Lepilemur_septentrionalis.k141_185316                      27034  6 +     54090 ---A---------------G-------------A----G----AA
i Lepilemur_septentrionalis.k141_185316                  I 1 C 0
s Leptonychotes_weddellii.KB714746.1                       3043155  3 +   3914936 a--a---------------a-------------------------
i Leptonychotes_weddellii.KB714746.1                     I 266 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6535  2 -     14121 g--g-----------------------------------------
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 1
s Lophocebus_aterrimus.ctg367                              1437191  7 +   1826925 a--a---------------a-------------a----g----ga
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5940  4 +     11245 ---------------------------------G----T----GA
i Loris_lydekkerianus.k141_2539221                       I 1 C 0
s Loris_tardigradus.ctg83                                  1004760  4 +   6120653 ---------------------------------G----T----GA
i Loris_tardigradus.ctg83                                I 1 C 0
s Loxodonta_africana.GL010049.1                            4217429  3 -  43346337 a--a---------------t-------------------------
i Loxodonta_africana.GL010049.1                          I 60 I 4
s Lycaon_pictus.CM007581.1                                17955221  3 -  59628241 a--a---------------a-------------------------
i Lycaon_pictus.CM007581.1                               I 63 C 0
s Macaca_arctoides.k141_2326796                               7001  7 +     40492 g--a---------------a-------------a----a----aa
i Macaca_arctoides.k141_2326796                          T 100 C 0
s Macaca_assamensis.Contig5                               59676260  7 +  60120075 g--a---------------a-------------a----a----aa
i Macaca_assamensis.Contig5                              T 100 C 0
s Macaca_cyclopis.k119_18836                                 12773  7 -     26193 g--a---------------a-------------a----a----aa
i Macaca_cyclopis.k119_18836                             T 103 C 0
s Macaca_fascicularis.k141_814140                            80557  7 -    114318 g--a---------------a-------------a----a----aa
i Macaca_fascicularis.k141_814140                        T 103 C 0
s Macaca_fuscata.k119_255327                                  6248  7 -     23192 g--a---------------a-------------a----a----aa
i Macaca_fuscata.k119_255327                             T 99 C 0
s Macaca_leonina.k141_3550399                                15717  7 -     29190 g--a---------------a-------------a----a----aa
i Macaca_leonina.k141_3550399                            T 103 C 0
s Macaca_maura.k141_2733130                                  24282  7 +     37952 g--a---------------a-------------a----a----aa
i Macaca_maura.k141_2733130                              T 103 C 0
s Macaca_mulatta.NC_041758.1                             186839371  7 + 187317192 g--a---------------a-------------a----a----aa
i Macaca_mulatta.NC_041758.1                             T 103 C 0
s Macaca_nemestrina.KQ007038.1                            25457934  7 -  25927173 g--a---------------a-------------a----a----aa
i Macaca_nemestrina.KQ007038.1                           T 103 C 0
s Macaca_nigra.k141_1655396                                  80130  7 +     89720 g--a---------------a-------------a----a----aa
i Macaca_nigra.k141_1655396                              T 103 C 0
s Macaca_radiata.k141_3680011                                 7131  7 +     20474 g--a---------------a-------------a----a----aa
i Macaca_radiata.k141_3680011                            T 103 C 0
s Macaca_siberu.k141_635500                                   6931  7 -     14993 g--a---------------a-------------a----a----aa
i Macaca_siberu.k141_635500                              T 103 C 0
s Macaca_silenus.Contig273                                  329797  7 -    668171 g--a---------------a-------------a----a----aa
i Macaca_silenus.Contig273                               T 103 C 0
s Macaca_thibetana.k99_256239                                 5247  7 -     24072 g--a---------------a-------------a----a----aa
i Macaca_thibetana.k99_256239                            T 100 C 0
s Macaca_tonkeana.k141_1498238                               25869  7 -     45290 g--a---------------a-------------a----a----aa
i Macaca_tonkeana.k141_1498238                           T 103 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90720  7 +     94391 A--A---------------A-------------A----G----GA
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 65 C 0
s Mandrillus_leucophaeus.scaffold280                      23937464  7 -  24302211 a--a---------------a-------------a----g----ga
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               351592  7 +    752769 a--a---------------a-------------a----g----ga
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              18599  3 +    737560 a--a---------------a-------------------------
i Manis_javanica.JSZB01003497.1                          I 60 C 0
s Manis_pentadactyla.KN006162.1                              50588  3 -    317179 a--a---------------a-------------------------
i Manis_pentadactyla.KN006162.1                          I 60 C 0
s Marmota_marmota.CZRN01000018.1                          33103178  4 -  40650429 a--a---------------g-------------g-----------
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        10428  8 -    207569 A--A---------------A-------------A---GG----AA
i Megaderma_lyra.MegLyr_scaffold_4542                    I 54 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10153  3 +     13704 A--A---------------A-------------------------
i Mellivora_capensis.MelCap_flattened_line_69365         I 64 C 0
s Mico_argentatus.k141_1239457                                6012 14 -      7380 a--a---------------atgaaggaga----a----a------
i Mico_argentatus.k141_1239457                           I 231 T 238
s Mico_humeralifer.k141_2457295                                241 14 +      1079 a--a---------------atgaaggaga----a----a------
i Mico_humeralifer.k141_2457295                          n 7 I 4
s Mico_schneideri.k141_1950671                                      6024 14 -      7356 a--a---------------atgaaggaga----a----a------
i Mico_schneideri.k141_1950671                                 I 231 T 238
s Microcebus_murinus.CM007674.1                           18291563  7 -  93316391 g--a---------------g-------------a----g----aa
i Microcebus_murinus.CM007674.1                          I 1 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    22431  7 -    145209 A--T------------TTTT-------------C-----------
i Microgale_talazaci.MicTal_scaffold_6613                I 244 I 3
s Micronycteris_hirsuta.MicHir_scaffold_52381                15756  7 -     19307 T--A---------------A-------------G----G----AA
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 65 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850714  7 +   8254450 a--a---------------a-------------g----g----aa
i Miniopterus_natalensis.LDJU01000034.1                  I 63 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34395  7 +     64694 A--A---------------A-------------G----G----AA
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 63 C 0
s Miopithecus_ogouensis.k141_534055                           9189  7 -     28506 a--a---------------a-------------a----g----ga
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6023  3 -      8324 A--A---------------A-------------------------
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 266 C 0
s Mirza_zaza.k141_952172                                      9108  7 -     37649 G--A---------------G-------------A----G----AT
i Mirza_zaza.k141_952172                                 I 1 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141726  4 -    366855 ---------------------------------A----A----AG
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 69 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35528  3 +     37127 A--A---------------A-------------------------
i Mungos_mungo.MunMun_flattened_line_23663               I 65 C 0
s Murina_feae.MurFea_scaffold_85699                           6918  7 +     14753 A--A---------------A-------------G----G----AA
i Murina_feae.MurFea_scaffold_85699                      I 63 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              5041  6 +     14296 GACA---------------T-------------T-----------
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               301344  3 -  14710649 a--a---------------a-------------------------
i Mustela_putorius.JH418006.1                            I 64 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71329  6 -     80779 G--A---------------T-------------G----A----A-
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                280561  7 -  10118263 a--a---------------a-------------g----g----aa
i Myotis_brandtii.KE162005.1                             I 63 C 0
s Myotis_davidii.KB100139.1                                1587823  7 -   6019432 a--a---------------a-------------g----g----aa
i Myotis_davidii.KB100139.1                              I 63 C 0
s Myotis_lucifugus.GL429869.1                              3903915  7 -   4330536 a--a---------------a-------------g----g----aa
i Myotis_lucifugus.GL429869.1                            I 63 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                          67  7 +      1835 A--A---------------A-------------G----G----AA
i Myotis_myotis.MyoMyo_scaffold_281845                   n 66 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189367  4 +    196477 A--A---------------A-------------A-----------
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 65 I 9
s Nasalis_larvatus.k141_413338                               15271  7 +     21681 a--a---------------a-------------a----g----aa
i Nasalis_larvatus.k141_413338                           I 107 T 107
s Nycticebus_bengalensis.LG01                            102586304  4 - 196305487 ---------------------------------G----T----GA
i Nycticebus_bengalensis.LG01                            I 1 C 0
s Nycticebus_coucang.k141_1127096                              228  4 +      2075 ---------------------------------G----T----GA
i Nycticebus_coucang.k141_1127096                        I 1 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761658  4 + 199412804 ---------------------------------G----T----GA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 1 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20307609  3 +  31847680 a--a---------------a-------------------------
i Neomonachus_schauinslandi.NINY01007730.1               I 373 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149500  3 -   9404916 a--a---------------a-------------------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 80 C 0
s Ochotona_princeps.JH802162.1                             1363561 22 +   3988456 g--aaaaggtgtggggggca-------------g----a----aa
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  746939  6 +  11899542 g--g---------------c-------------a----a----a-
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                              506759  3 -   2017862 a--a---------------a-------------------------
i Odobenus_rosmarus.KB229312.1                           I 63 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9947  8 -     18566 A--A-----------AAAAA-------------A-----------
i Orycteropus_afer.OryAfe_flattened_line_144387          I 60 I 3
s Oryctolagus_cuniculus.CM000791.1                        67147414  2 + 174332312 g--g-----------------------------------------
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 4
s Otocyon_megalotis.JAEUCK010005147.1                       462448  3 -    559221 a--a---------------a-------------------------
i Otocyon_megalotis.JAEUCK010005147.1                    I 65 C 0
s Otolemur_crassicaudatus.k141_222918                         4217  7 +      8798 G--G---------------G-------------G----T----GA
i Otolemur_crassicaudatus.k141_222918                    I 3 C 0
s Otolemur_garnettii.GL873799.1                             696380  7 -   1103335 G--G---------------g-------------g----t----ga
i Otolemur_garnettii.GL873799.1                          I 3 C 0
s Pan_paniscus.KQ411613.1                                    44231  7 +     80009 a--a---------------a-------------a----g----aa
i Pan_paniscus.KQ411613.1                                I 113 T 113
s Pan_troglodytes.CM009242.2                             189143133  7 + 189151597 a--a---------------a-------------a----g----aa
i Pan_troglodytes.CM009242.2                             I 8 I 1
s Panthera_onca.PanOnc_flattened_line_3271                  151261  3 +    230217 A--A---------------A-------------------------
i Panthera_onca.PanOnc_flattened_line_3271               I 48 C 0
s Panthera_pardus.KV860321.1                                264470  3 +  18783137 a--a---------------a-------------------------
i Panthera_pardus.KV860321.1                             I 48 C 0
s Panthera_tigris.KE722367.1                               4721349  3 -   8748460 a--a---------------a-------------------------
i Panthera_tigris.KE722367.1                             I 48 C 0
s Papio_anubis.CM001495.2                                183443214  7 + 183742232 a--a---------------a-------------a----g----ga
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             6912  7 +     20448 a--a---------------a-------------a----g----ga
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563720  7 +  20919399 a--a---------------a-------------a----g----ga
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   5656  7 +     41871 a--a---------------a-------------a----g----ga
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     8941  7 +     27711 a--a---------------a-------------a----g----ga
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  9022  7 +      9205 a--a---------------a-------------a----g----ga
i Papio_ursinus.k141_3428135                             C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10192  4 +     13100 ---------------------------------G----T----GA
i Perodicticus_ibeanus.k141_855320                       I 1 C 0
s Perodicticus_potto.k141_1092580                             8598  4 +     25941 ---------------------------------G----T----GA
i Perodicticus_potto.k141_1092580                        I 1 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12758  3 -     78924 A--A---------------A-------------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 63 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28210  6 -     29689 G--G---------------C-------------A----G----A-
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 I 4
s Piliocolobus_badius.k141_1234363                           43762  7 +     62158 a--a---------------a-------------a----g----aa
i Piliocolobus_badius.k141_1234363                       I 87 T 87
s Piliocolobus_gordonorum.k141_381342                        38509  7 +     89929 a--a---------------a-------------a----g----aa
i Piliocolobus_gordonorum.k141_381342                    I 103 T 103
s Piliocolobus_kirkii.k141_448987                            39925  7 +     51399 a--a---------------a-------------a----g----aa
i Piliocolobus_kirkii.k141_448987                        I 103 T 103
s Piliocolobus_tephrosceles.PDMG02000141.1                14296163  7 -  14605196 a--a---------------a-------------a----g----aa
i Piliocolobus_tephrosceles.PDMG02000141.1               I 103 T 103
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1859  7 +     22620 A--A---------------A-------------G----A----AG
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 63 C 0
s Pongo_abelii.CM009266.2                                189131160  7 + 189387572 a--a---------------a-------------a----g----aa
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570768  7 +   9816681 a--a---------------a-------------a----g----aa
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               73447  7 -     81375 a--a---------------a-------------a----g----aa
i Presbytis_comata.k141_677006                           I 103 T 103
s Presbytis_mitrata.k141_1087752                              5267  7 +     19060 a--a---------------a-------------a----g----aa
i Presbytis_mitrata.k141_1087752                         I 103 T 103
s Procavia_capensis.ProCapCap_scaffold_85530                 13451  4 -     22811 T--T---------------T-------------C-----------
i Procavia_capensis.ProCapCap_scaffold_85530             I 60 I 3
s Prolemur_simus.MPIZ01000396.1                            2596822  7 -   4620579 a--a---------------g-------------a----g----aa
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990804  7 +   2598838 g--a---------------a-------------g----g----aa
i Propithecus_coquerelli.NW_012148875.1                  I 1 C 0
s Propithecus_coronatus.k141_347390                          29116  7 +     38485 g--a---------------a-------------a----g----aa
i Propithecus_coronatus.k141_347390                      I 1 C 0
s Propithecus_diadema.k141_58108                              1159  7 -     13098 G--A---------------A-------------A----G----AA
i Propithecus_diadema.k141_58108                         I 1 C 0
s Propithecus_edwardsi.k141_1176054                          26637  7 +     35766 g--a---------------a-------------a----g----aa
i Propithecus_edwardsi.k141_1176054                      I 1 C 0
s Propithecus_perrieri.k141_1200571                           4824  7 -     24134 G--A---------------A-------------A----G----AA
i Propithecus_perrieri.k141_1200571                      I 1 C 0
s Propithecus_tattersalli.k141_790011                        28649  7 -     67325 G--A---------------A-------------A----G----AA
i Propithecus_tattersalli.k141_790011                    I 1 C 0
s Propithecus_verreauxi.k141_956661                           4872  7 -      6182 G--A---------------A-------------A----G----AA
i Propithecus_verreauxi.k141_956661                      I 1 C 0
s Pteronotus_parnellii.KE909381.1                            15178  7 -     21811 a--a---------------a-------------g----g----aa
i Pteronotus_parnellii.KE909381.1                        I 67 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40343  3 +     42204 A--A---------------A-------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 64 C 0
s Pteropus_alecto.KB030862.1                              22976886  7 +  28871421 a--a---------------a-------------a----g----ga
i Pteropus_alecto.KB030862.1                             I 63 C 0
s Pteropus_vampyrus.KN534172.1                                6939  7 -      8028 a--a---------------a-------------a----g----ga
i Pteropus_vampyrus.KN534172.1                           I 63 C 0
s Puma_concolor.QAVW01001104.1                            20274415  3 -  38429054 a--a---------------a-------------------------
i Puma_concolor.QAVW01001104.1                           I 48 C 0
s Pygathrix_cinerea.k141_1153803                             15280  7 -     91421 a--a---------------a-------------a----g----aa
i Pygathrix_cinerea.k141_1153803                         I 107 T 107
s Pygathrix_nigripes_b.ctg100                                 7609400  7 +   7812017 a--a---------------a-------------a----g----aa
i Pygathrix_nigripes_b.ctg100                               I 107 C 0
s Pygathrix_nigripes_a.k141_215492                             15252  7 -     72585 a--a---------------a-------------a----g----aa
i Pygathrix_nigripes_a.k141_215492                         I 107 T 107
s Rhinopithecus_bieti.k119_217274                             6965  7 -     11128 a--a---------------a-------------a----g----aa
i Rhinopithecus_bieti.k119_217274                        I 106 T 106
s Rhinopithecus_roxellana.NC_044550.1                     91236312  7 - 195417433 a--a---------------a-------------a----g----aa
i Rhinopithecus_roxellana.NC_044550.1                    I 100 T 100
s Rhinopithecus_strykeri.ctg102                            7671970  7 +   7961872 a--a---------------a-------------a----g----aa
i Rhinopithecus_strykeri.ctg102                          I 106 T 106
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87908  7 -     96226 A--G---------------A-------------A----G----GA
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 64 C 0
s Saguinus_bicolor.k141_8081                                   389 20 +     42994 a--a---------------atgaaggaga----aagaaa----ga
i Saguinus_bicolor.k141_8081                             I 8 I 2
s Saguinus_imperator.k141_57697                                174 20 +      1030 a--a---------------atgaaggaga----aagaaa----ga
i Saguinus_imperator.k141_57697                          n 7 I 2
s Saguinus_inustus.k141_3945547                                258 20 -      8737 a--a---------------atgaaggaga----aagaaa----ga
i Saguinus_inustus.k141_3945547                          n 7 I 2
s Saguinus_labiatus.k141_285685                               8426  7 +      8564 a--a---------------a-------------a----g----aa
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469740 20 + 209938924 a--a---------------atgaaggaga----aagaaa----ga
i Saguinus_midas.LG03                                    I 464 T 477
s Saguinus_mystax.k141_374627                                 8375 20 -      9399 a--a---------------atgaaggaga----aagaaa----ga
i Saguinus_mystax.k141_374627                            I 393 T 406
s Saimiri_boliviensis.NW_024100920.1                     119951117 19 - 121099817 a--aa----tg--------a--a-ggagaaag-a----a----ag
i Saimiri_boliviensis.NW_024100920.1                     C 0 I 1
s Saimiri_cassiquiarensis.k141_2188234                       23456 19 +     46362 a--aa----tg--------a--a-ggagaaag-a----a----ag
i Saimiri_cassiquiarensis.k141_2188234                   C 0 I 1
s Saimiri_macrodon.k141_716185                               23551 19 +     45824 a--aa----tg--------a--a-ggagaaag-a----a----ag
i Saimiri_macrodon.k141_716185                           C 0 I 1
s Saimiri_oerstedii.k141_1487881                             40230 19 -     64574 a--aa----tg--------a--a-ggagaaag-a----a----ag
i Saimiri_oerstedii.k141_1487881                         C 0 I 1
s Saimiri_sciureus.k141_2278166                               3302 19 -     23631 a--aa----tg--------a--a-ggagaaag-a----a----ag
i Saimiri_sciureus.k141_2278166                          C 0 I 1
s Saimiri_ustus.k141_1484609                                 23447 19 -     61129 a--aa----tg--------a--a-ggagaaag-a----a----ag
i Saimiri_ustus.k141_1484609                             C 0 I 1
s Sapajus_apella.ctg103                                    5420664  3 -   5703754 a--a---------------a-------------------------
i Sapajus_apella.ctg103                                  C 0 I 2
s Sapajus_macrocephalus.k141_351809                          56058 19 -     80660 a--aa----tg--------a--a-ggagaaag-a----a----ag
i Sapajus_macrocephalus.k141_351809                      I 353 T 367
s Semnopithecus_entellus.k141_1672505                          144  7 -     12572 A--A---------------A-------------A----G----AA
i Semnopithecus_entellus.k141_1672505                    n 5 I 2
s Semnopithecus_hypoleucos.k141_1615806                      26994  7 +     39453 a--a---------------a-------------a----g----aa
i Semnopithecus_hypoleucos.k141_1615806                  I 107 T 107
s Semnopithecus_johnii.k141_670120                            7512  7 +     27826 a--a---------------a-------------a----g----aa
i Semnopithecus_johnii.k141_670120                       I 106 T 106
s Semnopithecus_priam.k141_638794                             7034  7 -     19483 a--a---------------a-------------a----g----aa
i Semnopithecus_priam.k141_638794                        I 107 T 107
s Semnopithecus_schistaceus.k141_1572284                       335  7 -     12762 A--A---------------A-------------A----G----AA
i Semnopithecus_schistaceus.k141_1572284                 I 8 I 1
s Semnopithecus_vetulus.k141_910252                            196  7 +     13763 A--A---------------A-------------A----G----AA
i Semnopithecus_vetulus.k141_910252                      I 8 I 1
s Spermophilus_dauricus.KZ294078.1                         1954033  4 -   3870691 a--a---------------g-------------g-----------
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30845  3 +     97271 A--A---------------A-------------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 65 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              18431  3 -    196729 A--A---------------A-------------------------
i Suricata_suricatta.SurSur_flattened_line_6629          I 68 C 0
s Sus_scrofa.CM000828.4                                    6810868  8 +  69701581 t--a---------------a-g-----------g----t----aa
i Sus_scrofa.CM000828.4                                  I 329 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                10900  7 +     41958 A--A---------------A-------------G----G----AA
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 60 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72728  4 +    116680 A--A---------------A-------------A-----------
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 65 I 9
s Tapirus_indicus.TapInd_scaffold_9301                      118858  7 -    156842 A--A---------------A-------------G----G----AA
i Tapirus_indicus.TapInd_scaffold_9301                   I 64 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387315  7 +    539355 A--A---------------A-------------G----G----AA
i Tapirus_terrestris.TapTer_scaffold_755                 I 64 C 0
s Tarsius_lariang.k141_2201908                               26435  7 +     70052 g--a---------------a-------------g----g----aa
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1268  7 -     16117 g--a---------------a-------------g----g----aa
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428584  7 + 186847797 a--a---------------a-------------a----g----ga
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105530  6 +    114563 G--G---------------C-------------A----G----A-
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 5
s Tolypeutes_matacus.TolMat_scaffold_228639                   6510  6 +      8208 A--A-------------AAA-------------A-----------
i Tolypeutes_matacus.TolMat_scaffold_228639              I 65 I 8
s Tonatia_saurophila.TonSau_scaffold_294                     81297  7 +    610378 T--A---------------A-------------T----G----AA
i Tonatia_saurophila.TonSau_scaffold_294                 I 64 C 0
s Trachypithecus_auratus.k141_722599                         11085  7 -     20410 a--a---------------a-------------a----g----aa
i Trachypithecus_auratus.k141_722599                     I 107 T 107
s Trachypithecus_crepusculus.k141_582567                       199  7 -     12674 a--a---------------a-------------a----g----aa
i Trachypithecus_crepusculus.k141_582567                 I 107 T 107
s Trachypithecus_cristatus.k141_580354                       11186  7 +     19930 a--a---------------a-------------a----g----aa
i Trachypithecus_cristatus.k141_580354                   I 107 T 107
s Trachypithecus_francoisi.k141_1412647                       7597  7 -     19997 a--a---------------a-------------a----g----aa
i Trachypithecus_francoisi.k141_1412647                  I 91 T 91
s Trachypithecus_geei.k141_277701                            47736  7 -     60166 a--a---------------a-------------a----g----aa
i Trachypithecus_geei.k141_277701                        I 106 T 106
s Trachypithecus_germaini.k141_912491                        15208  7 -     27529 a--a---------------a-------------a----g----aa
i Trachypithecus_germaini.k141_912491                    I 107 T 107
s Trachypithecus_hatinhensis.k141_143409                     15152  7 -     18194 a--a---------------a-------------a----g----aa
i Trachypithecus_hatinhensis.k141_143409                 I 107 T 107
s Trachypithecus_laotum.k141_907409                           8864  7 -     21137 a--a---------------a-------------a----g----aa
i Trachypithecus_laotum.k141_907409                      I 91 T 91
s Trachypithecus_leucocephalus.k141_587342                    7567  7 -     10723 a--a---------------a-------------a----g----aa
i Trachypithecus_leucocephalus.k141_587342               I 91 T 91
s Trachypithecus_melamera.k141_434728                         6739  7 +      9834 a--a---------------a-------------a----g----aa
i Trachypithecus_melamera.k141_434728                    I 107 T 107
s Trachypithecus_obscurus.k141_190785                        25052  7 +     32220 a--a---------------a-------------a----g----aa
i Trachypithecus_obscurus.k141_190785                    I 107 T 107
s Trachypithecus_phayrei.ctg124                            5939154  7 +   6242583 a--a---------------a-------------a----g----aa
i Trachypithecus_phayrei.ctg124                          I 107 T 107
s Trachypithecus_pileatus.k141_2007326                        8405  7 +     20839 a--a---------------a-------------a----g----aa
i Trachypithecus_pileatus.k141_2007326                   I 106 T 106
s Trichechus_manatus.JH594705.1                            4293350  4 +  10818551 a--a---------------t-------------t-----------
i Trichechus_manatus.JH594705.1                          I 60 I 3
s Ursus_maritimus.KK499267.1                               4850543  3 -   5085361 a--a---------------a-------------------------
i Ursus_maritimus.KK499267.1                             I 63 C 0
s Varecia_rubra.k141_590885                                  11482  7 +     50397 A--A---------------G-------------A----G----AA
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11541  7 +     24756 A--A---------------G-------------A----G----AA
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371985  7 -   5488506 a--a---------------a-------------g----g----ca
i Vicugna_pacos.KN270157.1                               I 68 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10896  3 -     43706 A--A---------------A-------------------------
i Vulpes_lagopus.VulLag_flattened_line_30954             I 63 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          5472  3 +     86975 a--a---------------a-------------------------
i Zalophus_californianus.ZalCal_flattened_line_17732     I 63 C 0
e Mus_pahari.LT608297.1                                   31355110  4 -  89631738 I
e Mus_spretus.CM004101.1                                  90752512  4 - 130317789 I
e Mus_musculus.chr8                                       87650451  4 - 129401213 I
e Mus_caroli.LT608237.1                                   84361453  4 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      14994  0 +     63895 C
e Xerus_inauris.XerIna_scaffold_2302                          1173  0 +    224448 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   53362 63 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     9322 21 -     10553 I
e Tupaia_chinensis.KB320699.1                              2155905 215 +   4065304 T
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Sorex_araneus.JH798187.1                                13651056 93 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               3814 63 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_42075                      411  4 -     30804 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    153257 71 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570713  4 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Psammomys_obesus.NESX01036370.1                            10483  4 -     21651 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Peromyscus_maniculatus.KI615324.1                       18194865  4 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80239  4 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   25239  4 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Nannospalax_galili.KL204047.1                            2034163  2 -   3037898 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11260571  4 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182333  4 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 32827 16 +    140813 I
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276898  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3328282 71 -   7059049 I
e Ellobius_talpinus.LOJH01081419.1                             523  4 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          20392  4 -    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Crocidura_indochinensis.CroInd_scaffold_37019               3028 88 -     19598 I
e Cricetulus_griseus.LT883664.1                           11667658  4 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 50291  2 +     63868 I
e Condylura_cristata.JH655891.1                           17548142 67 -  53390261 I
e Colobus_guereza.LG01                                   199948958  0 + 200372422 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e CanFam4.chr16                                           17799210 78 -  60362399 I
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74597  0 -     89534 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     70877 18 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       6777 1 +     62944 g
s Acinonyx_jubatus.LLWD01001279.1                           827411 1 -   1699592 g
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510685 1 -  29979442 g
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             79461 1 -    347723 g
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14706 1 -     52922 g
i Allenopithecus_nigroviridis.k141_3361533               C 0 I 116
s Allochrocebus_lhoesti.k141_4309873                         14642 1 -     28001 g
i Allochrocebus_lhoesti.k141_4309873                     C 0 I 96
s Allochrocebus_preussi.k141_1442296                          5138 1 -     18505 g
i Allochrocebus_preussi.k141_1442296                     C 0 I 96
s Allochrocebus_solatus.k141_166128                           5992 1 -     12518 g
i Allochrocebus_solatus.k141_166128                      C 0 I 96
s Alouatta_belzebul.k141_3560514                              7470 1 +     51355 g
i Alouatta_belzebul.k141_3560514                         T 197 C 0
s Alouatta_caraya.k141_1701091                                 592 1 -     36483 g
i Alouatta_caraya.k141_1701091                           T 183 C 0
s Alouatta_discolor.k141_566626                              11227 1 +     28687 a
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1509701                                24857 1 +     25266 g
i Alouatta_juara.k141_1509701                            T 194 C 0
s Alouatta_macconnelli.k141_918386                             772 1 -      9457 a
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_3472759                            18164 1 -     18578 g
i Alouatta_nigerrima.k141_3472759                        T 194 C 0
s Alouatta_palliata.k141_2135620                              3551 1 +     47717 g
i Alouatta_palliata.k141_2135620                         T 191 C 0
s Alouatta_puruensis.k141_362188                               256 1 +      5663 g
i Alouatta_puruensis.k141_362188                         T 198 C 0
s Alouatta_seniculus.k141_117119                             14906 1 +     50774 A
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185457 1 +    412891 G
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  15493 1 -     33861 g
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            15513 1 -     34016 g
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297910 1 -   5030052 g
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             15515 1 -     34685 g
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28639 1 -     47192 g
i Aotus_vociferans.k141_344750                           C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       11561 1 +     14667 A
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4865 1 +     43469 G
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  53767 1 -     92717 A
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54394 1 +     85213 A
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             5248 1 -     10423 g
i Callibella_humilis.k141_1278103                        T 264 C 0
s Callimico_goeldii.k141_1091182                             24719 1 +     31915 g
i Callimico_goeldii.k141_1091182                         T 267 C 0
s Callithrix_geoffroyi.k119_512088                            5214 1 +      5267 g
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590428 1 - 189096842 g
i Callithrix_jacchus.pat_scaffold_3                      T 238 C 0
s Callithrix_kuhlii.k119_1164682                             11959 1 -     12001 G
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002492 1 -  17673402 a
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334950 1 -   7040546 a
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  403233 1 -   1652518 a
i Camelus_ferus.KB017975.1                               C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    185333 1 -    185531 G
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034719 1 -   9314153 g
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17958984 1 -  59632846 g
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18500496 1 +  63665305 g
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007247396.1                           201435 1 +    308752 g
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5219 1 -     11696 G
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     93129 1 +    217609 A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          9873 1 -     11392 a
i Cebuella_niveiventris.k141_1251222                     T 274 C 0
s Cebuella_pygmaea.k141_1309012                               5971 1 -      7577 g
i Cebuella_pygmaea.k141_1309012                          T 244 C 0
s Cebus_albifrons.Contig27                                25652431 1 +  26074798 g
i Cebus_albifrons.Contig27                               T 448 I 449
s Cebus_olivaceus.k141_398305                                 1573 1 +      1777 g
i Cebus_olivaceus.k141_398305                            I 5 C 0
s Cebus_unicolor.k141_544048                                 49910 1 -     74725 g
i Cebus_unicolor.k141_544048                             I 5 C 0
s Cephalopachus_bancanus.k141_1423433                         5440 1 +     31688 g
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12231546 1 +  27778364 G
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2573 1 -     25243 G
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4475651 1 +   4669795 g
i Cercocebus_atys.KQ010504.1                             C 0 I 96
s Cercocebus_chrysogaster.k141_393940                        14196 1 -     19203 g
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3342297                            812 1 -     14043 g
i Cercocebus_lunulatus.k141_3342297                      C 0 I 96
s Cercocebus_torquatus.k141_3057011                           8848 1 +     27781 g
i Cercocebus_torquatus.k141_3057011                      C 0 I 93
s Cercopithecus_ascanius.k141_1024104                         9013 1 -     20310 g
i Cercopithecus_ascanius.k141_1024104                    C 0 I 96
s Cercopithecus_cephus.k141_1078548                          11992 1 +     29689 g
i Cercopithecus_cephus.k141_1078548                      C 0 I 97
s Cercopithecus_diana.k141_1150327                            6746 1 -     20078 g
i Cercopithecus_diana.k141_1150327                       C 0 I 96
s Cercopithecus_hamlyni.k141_187466                          14669 1 -     27936 g
i Cercopithecus_hamlyni.k141_187466                      C 0 I 96
s Cercopithecus_lowei.k141_1854285                            3533 1 -     17152 g
i Cercopithecus_lowei.k141_1854285                       C 0 I 96
s Cercopithecus_albogularis.ctg5                                38817072 1 +  39242232 g
i Cercopithecus_albogularis.ctg5                               C 0 I 96
s Cercopithecus_mona.ctg39                                21222764 1 -  21565898 g
i Cercopithecus_mona.ctg39                               C 0 I 96
s Cercopithecus_neglectus.k141_2526306                       39882 1 -     53127 g
i Cercopithecus_neglectus.k141_2526306                   C 0 I 96
s Cercopithecus_nictitans.k141_1119862                         133 1 +     13442 g
i Cercopithecus_nictitans.k141_1119862                   C 0 I 96
s Cercopithecus_petaurista.k141_807961                       14682 1 -     27947 g
i Cercopithecus_petaurista.k141_807961                   C 0 I 96
s Cercopithecus_pogonias.k141_822820                         14658 1 +     17596 g
i Cercopithecus_pogonias.k141_822820                     C 0 I 96
s Cercopithecus_roloway.k141_2581234                           705 1 +     14005 g
i Cercopithecus_roloway.k141_2581234                     C 0 I 96
s Cheirogaleus_major.k141_333249                             21147 1 -     52598 A
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16512 1 +     57038 a
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                          11125 1 +     11226 g
i Chiropotes_albinasus.k141_2813271                      I 7 T 43
s Chlorocebus_aethiops.ctg25                              18428642 1 -  18827391 g
i Chlorocebus_aethiops.ctg25                             C 0 I 96
s Chlorocebus_pygerythrus.k141_1025673                       15079 1 -     50209 g
i Chlorocebus_pygerythrus.k141_1025673                   C 0 I 96
s Chlorocebus_sabaeus.CM001947.1                         135422079 1 + 135778131 g
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 96
s Colobus_angolensis.KN981557.1                            1910584 1 +   2368649 g
i Colobus_angolensis.KN981557.1                          T 103 I 103
s Colobus_polykomos.k141_906115                              37118 1 +     84244 g
i Colobus_polykomos.k141_906115                          T 103 I 103
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28598 1 -     87169 G
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537363 1 -  12879189 A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630231 1 +  20541912 g
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673397 1 +   1390856 g
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6149 1 +    198055 G
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE759718.1                                  10634 1 +     11740 g
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Enhydra_lutris.KZ291758.1                               16329419 1 -  41312741 g
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2145828 1 -  14770903 g
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1283651 1 +   4378816 g
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18531471 1 -  39960074 g
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               33500 1 +    498745 g
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21205249 1 -  21539334 g
i Erythrocebus_patas.Contig38                            C 0 I 96
s Eulemur_albifrons.k141_342033                              13869 1 -     14127 A
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6572 1 -     16928 A
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15596 1 -     25546 A
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12800 1 +     26330 a
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14035 1 +     23973 A
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12797 1 +     75513 a
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10727 1 +     97555 a
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              218 1 +     13026 a
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4271 1 -     17153 A
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13844 1 +    111500 A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237062 1 + 206538554 g
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195905 1 + 205367284 g
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  9649 1 -     36744 G
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     426695 1 -    453645 A
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4385 1 +     11339 a
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            1697 1 +     41679 A
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1266 1 -      9135 g
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              16032 1 -     32273 g
i Gorilla_beringei.k141_3596273                          T 117 I 117
s Gorilla_gorilla.LT578341.1                             186338178 1 + 186649187 g
i Gorilla_gorilla.LT578341.1                             T 108 I 108
s Hapalemur_alaotrensis.k141_170648                           6908 1 -     19426 A
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12057 1 -     15286 A
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13696 1 +     18253 a
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13797 1 -     41752 A
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13634 1 -     16460 A
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242431 1 +    327341 G
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hoolock_leuconedys.ctg274                                    434844 1 +    630532 g
i Hoolock_leuconedys.ctg274                                 T 110 I 110
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45125 1 +     55795 G
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Indri_indri.k141_3655594                                   22588 1 +     31101 a
i Indri_indri.k141_3655594                               C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    16476 1 -     42476 G
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15524149 1 -  30322482 A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7510 1 +     64341 g
i Leontocebus_fuscicollis.k141_1820339                   T 283 C 0
s Leontocebus_illigeri.k141_3350179                           4833 1 +      4941 g
i Leontocebus_illigeri.k141_3350179                      I 7 C 0
s Leontocebus_nigricollis.k141_4610752                        7551 1 +     35603 g
i Leontocebus_nigricollis.k141_4610752                   T 270 C 0
s Leontopithecus_chrysomelas.k141_1519602                    29012 1 +     38576 g
i Leontopithecus_chrysomelas.k141_1519602                T 225 C 0
s Leontopithecus_rosalia.k141_464620                         25709 1 +     66356 g
i Leontopithecus_rosalia.k141_464620                     T 228 C 0
s Lepilemur_ankaranensis.k141_596936                         11043 1 -     23766 A
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29104 1 +     45836 A
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1644 1 +     25010 A
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27040 1 +     54090 A
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3043158 1 +   3914936 g
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437198 1 +   1826925 g
i Lophocebus_aterrimus.ctg367                            C 0 I 94
s Loris_lydekkerianus.k141_2539221                            5944 1 +     11245 A
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004764 1 +   6120653 A
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17955224 1 -  59628241 g
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               7008 1 +     40492 g
i Macaca_arctoides.k141_2326796                          C 0 I 100
s Macaca_assamensis.Contig5                               59676267 1 +  60120075 g
i Macaca_assamensis.Contig5                              C 0 I 100
s Macaca_cyclopis.k119_18836                                 12780 1 -     26193 g
i Macaca_cyclopis.k119_18836                             C 0 I 103
s Macaca_fascicularis.k141_814140                            80564 1 -    114318 g
i Macaca_fascicularis.k141_814140                        C 0 I 103
s Macaca_fuscata.k119_255327                                  6255 1 -     23192 g
i Macaca_fuscata.k119_255327                             C 0 I 99
s Macaca_leonina.k141_3550399                                15724 1 -     29190 g
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  24289 1 +     37952 g
i Macaca_maura.k141_2733130                              C 0 I 103
s Macaca_mulatta.NC_041758.1                             186839378 1 + 187317192 g
i Macaca_mulatta.NC_041758.1                             C 0 I 103
s Macaca_nemestrina.KQ007038.1                            25457941 1 -  25927173 g
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  80137 1 +     89720 g
i Macaca_nigra.k141_1655396                              C 0 I 103
s Macaca_radiata.k141_3680011                                 7138 1 +     20474 g
i Macaca_radiata.k141_3680011                            C 0 I 103
s Macaca_siberu.k141_635500                                   6938 1 -     14993 g
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  329804 1 -    668171 g
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 5254 1 -     24072 g
i Macaca_thibetana.k99_256239                            C 0 I 100
s Macaca_tonkeana.k141_1498238                               25876 1 -     45290 g
i Macaca_tonkeana.k141_1498238                           C 0 I 103
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90727 1 +     94391 G
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23937471 1 -  24302211 g
i Mandrillus_leucophaeus.scaffold280                     C 0 I 96
s Mandrillus_sphinx.Contig270                               351599 1 +    752769 g
i Mandrillus_sphinx.Contig270                            C 0 I 92
s Manis_javanica.JSZB01003497.1                              18602 1 +    737560 g
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              50591 1 -    317179 g
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        10436 1 -    207569 G
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10156 1 +     13704 G
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mico_argentatus.k141_1239457                                5788 1 -      7380 g
i Mico_argentatus.k141_1239457                           T 238 C 0
s Mico_humeralifer.k141_1976199                               4861 1 +     18990 g
i Mico_humeralifer.k141_1976199                          I 7 C 0
s Mico_schneideri.k141_1950671                                      5800 1 -      7356 g
i Mico_schneideri.k141_1950671                                 T 238 C 0
s Microcebus_murinus.CM007674.1                           18291570 1 -  93316391 a
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                15763 1 -     19307 G
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850721 1 +   8254450 g
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34402 1 +     64694 G
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9196 1 -     28506 G
i Miopithecus_ogouensis.k141_534055                      C 0 I 80
s Mirounga_angustirostris.MirAng_flattened_line_93702         6026 1 -      8324 G
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      9115 1 -     37649 A
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141730 1 -    366855 G
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35531 1 +     37127 G
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           6925 1 +     14753 G
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mustela_putorius.JH418006.1                               301347 1 -  14710649 g
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                280568 1 -  10118263 g
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1587830 1 -   6019432 g
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3903922 1 -   4330536 g
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                          74 1 +      1835 G
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 C 0
s Nasalis_larvatus.k141_413338                               15171 1 +     21681 g
i Nasalis_larvatus.k141_413338                           T 107 I 107
s Neomonachus_schauinslandi.NINY01007730.1                20307612 1 +  31847680 g
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149503 1 -   9404916 g
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102586308 1 - 196305487 A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              232 1 +      2075 A
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761662 1 + 199412804 G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1363583 1 +   3988456 g
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              506762 1 -   2017862 g
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462451 1 -    559221 g
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4224 1 +      8798 A
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696387 1 -   1103335 a
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    44125 1 +     80009 g
i Pan_paniscus.KQ411613.1                                T 113 C 0
s Pan_troglodytes.NBAG03001836.1                             30050 1 +     51860 g
i Pan_troglodytes.NBAG03001836.1                         I 7 I 131
s Panthera_onca.PanOnc_flattened_line_3271                  151264 1 +    230217 G
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                264473 1 +  18783137 g
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4721352 1 -   8748460 g
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183443221 1 + 183742232 g
i Papio_anubis.CM001495.2                                C 0 I 148
s Papio_cynocephalus.k141_4307930                             6919 1 +     20448 g
i Papio_cynocephalus.k141_4307930                        C 0 I 96
s Papio_hamadryas.Contig39                                20563727 1 +  20919399 g
i Papio_hamadryas.Contig39                               C 0 I 100
s Papio_kindae.k141_1936966                                   5663 1 +     41871 g
i Papio_kindae.k141_1936966                              C 0 I 96
s Papio_papio.k141_802527                                     8948 1 +     27711 g
i Papio_papio.k141_802527                                C 0 I 104
s Papio_ursinus.k141_3428135                                  9029 1 +      9205 g
i Papio_ursinus.k141_3428135                             C 0 I 92
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12761 1 -     78924 G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10196 1 +     13100 A
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8602 1 +     25941 A
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Piliocolobus_badius.k141_1234363                           43682 1 +     62158 g
i Piliocolobus_badius.k141_1234363                       T 87 I 87
s Piliocolobus_gordonorum.k141_381342                        38413 1 +     89929 g
i Piliocolobus_gordonorum.k141_381342                    T 103 I 103
s Piliocolobus_kirkii.k141_448987                            39829 1 +     51399 g
i Piliocolobus_kirkii.k141_448987                        T 103 I 103
s Piliocolobus_tephrosceles.PDMG02000141.1                14296067 1 -  14605196 g
i Piliocolobus_tephrosceles.PDMG02000141.1               T 103 I 103
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1866 1 +     22620 A
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189131167 1 + 189387572 g
i Pongo_abelii.CM009266.2                                C 0 I 109
s Pongo_pygmaeus.ctg66                                     9570775 1 +   9816681 g
i Pongo_pygmaeus.ctg66                                   C 0 I 108
s Presbytis_comata.k141_677006                               73351 1 -     81375 g
i Presbytis_comata.k141_677006                           T 103 I 103
s Presbytis_mitrata.k141_1087752                              5171 1 +     19060 g
i Presbytis_mitrata.k141_1087752                         T 103 I 103
s Prolemur_simus.MPIZ01000396.1                            2596829 1 -   4620579 a
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990811 1 +   2598838 a
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29123 1 +     38485 a
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1166 1 -     13098 A
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26644 1 +     35766 a
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4831 1 -     24134 A
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28656 1 -     67325 A
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4879 1 -      6182 A
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            15185 1 -     21811 g
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40346 1 +     42204 G
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22976893 1 +  28871421 g
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                6946 1 -      8028 g
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20274418 1 -  38429054 g
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15180 1 -     91421 g
i Pygathrix_cinerea.k141_1153803                         T 107 I 107
s Pygathrix_nigripes_b.ctg100                                 7609407 1 +   7812017 t
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             15152 1 -     72585 g
i Pygathrix_nigripes_a.k141_215492                         T 107 I 107
s Rhinopithecus_bieti.k119_217274                             6866 1 -     11128 g
i Rhinopithecus_bieti.k119_217274                        T 106 I 106
s Rhinopithecus_roxellana.NC_044550.1                     91236219 1 - 195417433 g
i Rhinopithecus_roxellana.NC_044550.1                    T 100 I 100
s Rhinopithecus_strykeri.ctg102                            7671871 1 +   7961872 g
i Rhinopithecus_strykeri.ctg102                          T 106 I 106
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87915 1 -     96226 G
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               8187 1 -      8359 g
i Saguinus_bicolor.k141_2619299                          I 7 C 0
s Saguinus_imperator.k141_2524406                             2145 1 +      2197 g
i Saguinus_imperator.k141_2524406                        I 7 C 0
s Saguinus_inustus.k141_699149                               13564 1 +     13640 g
i Saguinus_inustus.k141_699149                           I 7 C 0
s Saguinus_labiatus.k141_285685                               8433 1 +      8564 g
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469283 1 + 209938924 g
i Saguinus_midas.LG03                                    T 477 C 0
s Saguinus_mystax.k141_374627                                 7989 1 -      9399 g
i Saguinus_mystax.k141_374627                            T 406 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951137 1 - 121099817 a
i Saimiri_boliviensis.NW_024100920.1                     I 1 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23476 1 +     46362 a
i Saimiri_cassiquiarensis.k141_2188234                   I 1 C 0
s Saimiri_macrodon.k141_716185                               23571 1 +     45824 a
i Saimiri_macrodon.k141_716185                           I 1 C 0
s Saimiri_oerstedii.k141_1487881                             40250 1 -     64574 a
i Saimiri_oerstedii.k141_1487881                         I 1 C 0
s Saimiri_sciureus.k141_2278166                               3322 1 -     23631 a
i Saimiri_sciureus.k141_2278166                          I 1 C 0
s Saimiri_ustus.k141_1484609                                 23467 1 -     61129 a
i Saimiri_ustus.k141_1484609                             I 1 C 0
s Sapajus_apella.ctg103                                    5420669 1 -   5703754 g
i Sapajus_apella.ctg103                                  I 2 C 0
s Sapajus_macrocephalus.k141_351809                          55710 1 -     80660 g
i Sapajus_macrocephalus.k141_351809                      T 367 C 0
s Semnopithecus_entellus.k141_11662                          19689 1 -     19888 G
i Semnopithecus_entellus.k141_11662                      I 5 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26894 1 +     39453 g
i Semnopithecus_hypoleucos.k141_1615806                  T 107 I 107
s Semnopithecus_johnii.k141_670120                            7413 1 +     27826 g
i Semnopithecus_johnii.k141_670120                       T 106 I 106
s Semnopithecus_priam.k141_638794                             6934 1 -     19483 g
i Semnopithecus_priam.k141_638794                        T 107 I 107
s Semnopithecus_schistaceus.k141_1584426                      7000 1 +      7198 g
i Semnopithecus_schistaceus.k141_1584426                 I 5 I 10
s Semnopithecus_vetulus.k141_1200928                         15260 1 +     15514 g
i Semnopithecus_vetulus.k141_1200928                     I 7 I 10
s Spilogale_gracilis.SpiGra_flattened_line_13525             30848 1 +     97271 G
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              18434 1 -    196729 A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6810876 1 +  69701581 a
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                10907 1 +     41958 G
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118865 1 -    156842 G
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387322 1 +    539355 G
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               26442 1 +     70052 g
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1275 1 -     16117 g
i Tarsius_wallacei.k141_254427                           C 0 I 69
s Theropithecus_gelada.CM009954.1                        186428591 1 + 186847797 g
i Theropithecus_gelada.CM009954.1                        C 0 I 96
s Tonatia_saurophila.TonSau_scaffold_294                     81304 1 +    610378 G
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         10985 1 -     20410 g
i Trachypithecus_auratus.k141_722599                     T 107 I 107
s Trachypithecus_crepusculus.k141_582567                        99 1 -     12674 g
i Trachypithecus_crepusculus.k141_582567                 T 107 I 107
s Trachypithecus_cristatus.k141_580354                       11086 1 +     19930 g
i Trachypithecus_cristatus.k141_580354                   T 107 I 107
s Trachypithecus_francoisi.k141_1412647                       7513 1 -     19997 g
i Trachypithecus_francoisi.k141_1412647                  T 91 I 91
s Trachypithecus_geei.k141_277701                            47637 1 -     60166 g
i Trachypithecus_geei.k141_277701                        T 106 I 106
s Trachypithecus_germaini.k141_912491                        15108 1 -     27529 g
i Trachypithecus_germaini.k141_912491                    T 107 I 107
s Trachypithecus_hatinhensis.k141_143409                     15052 1 -     18194 g
i Trachypithecus_hatinhensis.k141_143409                 T 107 I 107
s Trachypithecus_laotum.k141_907409                           8780 1 -     21137 g
i Trachypithecus_laotum.k141_907409                      T 91 I 91
s Trachypithecus_leucocephalus.k141_587342                    7483 1 -     10723 g
i Trachypithecus_leucocephalus.k141_587342               T 91 I 91
s Trachypithecus_melamera.k141_434728                         6639 1 +      9834 g
i Trachypithecus_melamera.k141_434728                    T 107 I 107
s Trachypithecus_obscurus.k141_190785                        24952 1 +     32220 g
i Trachypithecus_obscurus.k141_190785                    T 107 I 107
s Trachypithecus_phayrei.ctg124                            5939054 1 +   6242583 g
i Trachypithecus_phayrei.ctg124                          T 107 I 107
s Trachypithecus_pileatus.k141_2007326                        8306 1 +     20839 g
i Trachypithecus_pileatus.k141_2007326                   T 106 I 106
s Ursus_maritimus.KK499267.1                               4850546 1 -   5085361 g
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  11489 1 +     50397 A
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11548 1 +     24756 A
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371992 1 -   5488506 a
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10899 1 -     43706 G
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          5475 1 +     86975 g
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Echinops_telfairi.JH980293.1                            48780689 3 + 111700974 I
e Mus_pahari.LT608297.1                                   31355110 4 -  89631738 I
e Mus_spretus.CM004101.1                                  90752512 4 - 130317789 I
e Mus_musculus.chr8                                       87650451 4 - 129401213 I
e Mus_caroli.LT608237.1                                   84361453 4 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      14994 0 +     63895 C
e Xerus_inauris.XerIna_scaffold_2302                          1173 0 +    224448 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   53362 63 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     9322 21 -     10553 I
e Tupaia_chinensis.KB320699.1                              2155905 215 +   4065304 T
e Trichechus_manatus.JH594705.1                            4293354 3 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   6516 8 +      8208 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              105536 5 +    114563 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 72732 9 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Spermophilus_dauricus.KZ294078.1                         1954037 0 -   3870691 C
e Sorex_araneus.JH798187.1                                13651056 93 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               3814 63 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_42075                      411 4 -     30804 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    153257 71 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570713 4 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Psammomys_obesus.NESX01036370.1                            10483 4 -     21651 I
e Procavia_capensis.ProCapCap_scaffold_85530                 13455 3 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     28216 4 -     29689 I
e Peromyscus_maniculatus.KI615324.1                       18194865 4 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Oryctolagus_cuniculus.CM000791.1                        67147416 4 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387               9955 3 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80239 4 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   25239 4 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  746945 0 +  11899542 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Nannospalax_galili.KL204047.1                            2034163 2 -   3037898 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189371 9 +    196477 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     71335 0 -     80779 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              5047 0 +     14296 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11260571 4 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    22438 3 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182333 4 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 32827 16 +    140813 I
e Marmota_marmota.CZRN01000018.1                          33103182 0 -  40650429 C
e Loxodonta_africana.GL010049.1                            4217432 4 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     6537 1 -     14121 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276898 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Ictidomys_tridecemlineatus.JH393364.1                    7520982 0 -   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                      83203 0 +    135385 C
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                1000 3 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20662314 5 +  22651954 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32699 5 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31458 0 +     49224 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Fukomys_damarensis.KN121974.1                             850525 5 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3328282 71 -   7059049 I
e Ellobius_talpinus.LOJH01081419.1                             523 4 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          20392 4 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1097777 3 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    36491 0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            63648 8 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35856 0 +     51376 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    837171 0 +   1526836 C
e Crocidura_indochinensis.CroInd_scaffold_37019               3028 88 -     19598 I
e Cricetulus_griseus.LT883664.1                           11667658 4 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 50291 2 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          14519 0 -     20389 C
e Condylura_cristata.JH655891.1                           17548142 67 -  53390261 I
e Colobus_guereza.LG01                                   199948958 0 + 200372422 C
e Choloepus_hoffmanni.KN194906.1                            173497 9 +    839153 I
e Choloepus_didactylus.ChoDid_scaffold_45914                 18421 8 +     19366 I
e Chinchilla_lanigera.JH722012.1                           1252897 0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_138870             641 8 -      8501 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Castor_canadensis.CasCan_scaffold_2074                    137166 0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                    1149 5 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e CanFam4.chr16                                           17799210 78 -  60362399 I
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      12706 8 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74597 0 -     89534 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     70877 18 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       6778 1 +     62944 g
s Acinonyx_jubatus.LLWD01001279.1                           827412 1 -   1699592 c
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510686 1 -  29979442 a
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             79462 1 -    347723 a
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14823 1 -     52922 g
i Allenopithecus_nigroviridis.k141_3361533               I 116 C 0
s Allochrocebus_lhoesti.k141_4309873                         14739 1 -     28001 g
i Allochrocebus_lhoesti.k141_4309873                     I 96 C 0
s Allochrocebus_preussi.k141_1442296                          5235 1 -     18505 g
i Allochrocebus_preussi.k141_1442296                     I 96 C 0
s Allochrocebus_solatus.k141_166128                           6089 1 -     12518 g
i Allochrocebus_solatus.k141_166128                      I 96 C 0
s Alouatta_belzebul.k141_3560514                              7471 1 +     51355 g
i Alouatta_belzebul.k141_3560514                         C 0 I 197
s Alouatta_caraya.k141_1701091                                 593 1 -     36483 g
i Alouatta_caraya.k141_1701091                           C 0 I 183
s Alouatta_discolor.k141_566626                              11228 1 +     28687 a
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1509701                                24858 1 +     25266 g
i Alouatta_juara.k141_1509701                            C 0 I 194
s Alouatta_macconnelli.k141_918386                             773 1 -      9457 a
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_3472759                            18165 1 -     18578 g
i Alouatta_nigerrima.k141_3472759                        C 0 I 194
s Alouatta_palliata.k141_2135620                              3552 1 +     47717 g
i Alouatta_palliata.k141_2135620                         C 0 I 191
s Alouatta_puruensis.k141_362188                               257 1 +      5663 g
i Alouatta_puruensis.k141_362188                         C 0 I 198
s Alouatta_seniculus.k141_117119                             14907 1 +     50774 A
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185458 1 +    412891 A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  15494 1 -     33861 g
i Aotus_azarae.k141_3104676                              C 0 I 201
s Aotus_griseimembra.k141_2240599                            15514 1 -     34016 g
i Aotus_griseimembra.k141_2240599                        C 0 I 217
s Aotus_nancymaae.KZ198451.1                               4297911 1 -   5030052 g
i Aotus_nancymaae.KZ198451.1                             C 0 I 208
s Aotus_trivirgatus.k141_2152450                             15516 1 -     34685 g
i Aotus_trivirgatus.k141_2152450                         C 0 I 213
s Aotus_vociferans.k141_344750                               28640 1 -     47192 g
i Aotus_vociferans.k141_344750                           C 0 I 213
s Arctocebus_calabarensis.k141_2318572                       11562 1 +     14667 T
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4866 1 +     43469 A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  53768 1 -     92717 A
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54395 1 +     85213 A
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             5249 1 -     10423 g
i Callibella_humilis.k141_1278103                        C 0 I 266
s Callimico_goeldii.k141_1091182                             24720 1 +     31915 g
i Callimico_goeldii.k141_1091182                         C 0 I 270
s Callithrix_geoffroyi.k119_512088                            5215 1 +      5267 g
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590429 1 - 189096842 g
i Callithrix_jacchus.pat_scaffold_3                      C 0 I 240
s Callithrix_kuhlii.k119_1164682                             11960 1 -     12001 G
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002493 1 -  17673402 a
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334951 1 -   7040546 a
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  403234 1 -   1652518 a
i Camelus_ferus.KB017975.1                               C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    185334 1 -    185531 A
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034720 1 -   9314153 a
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17958985 1 -  59632846 a
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18500497 1 +  63665305 a
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007247396.1                           201436 1 +    308752 g
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5220 1 -     11696 A
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     93130 1 +    217609 A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          9874 1 -     11392 g
i Cebuella_niveiventris.k141_1251222                     C 0 I 276
s Cebuella_pygmaea.k141_1309012                               5972 1 -      7577 g
i Cebuella_pygmaea.k141_1309012                          C 0 I 246
s Cebus_albifrons.Contig27                                25652881 1 +  26074798 g
i Cebus_albifrons.Contig27                               I 449 T 449
s Cebus_olivaceus.k141_398305                                 1574 1 +      1777 g
i Cebus_olivaceus.k141_398305                            C 0 I 111
s Cebus_unicolor.k141_544048                                 49911 1 -     74725 g
i Cebus_unicolor.k141_544048                             C 0 I 113
s Cephalopachus_bancanus.k141_1423433                         5441 1 +     31688 g
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12231547 1 +  27778364 a
i Ceratotherium_simum.JH767749.1                         C 0 I 9
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2574 1 -     25243 A
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 I 9
s Cercocebus_atys.KQ010504.1                               4475748 1 +   4669795 g
i Cercocebus_atys.KQ010504.1                             I 96 C 0
s Cercocebus_chrysogaster.k141_393940                        14197 1 -     19203 g
i Cercocebus_chrysogaster.k141_393940                    C 0 I 27
s Cercocebus_lunulatus.k141_3342297                            909 1 -     14043 g
i Cercocebus_lunulatus.k141_3342297                      I 96 C 0
s Cercocebus_torquatus.k141_3057011                           8942 1 +     27781 g
i Cercocebus_torquatus.k141_3057011                      I 93 C 0
s Cercopithecus_ascanius.k141_1024104                         9110 1 -     20310 g
i Cercopithecus_ascanius.k141_1024104                    I 96 C 0
s Cercopithecus_cephus.k141_1078548                          12090 1 +     29689 g
i Cercopithecus_cephus.k141_1078548                      I 97 C 0
s Cercopithecus_diana.k141_1150327                            6843 1 -     20078 g
i Cercopithecus_diana.k141_1150327                       I 96 C 0
s Cercopithecus_hamlyni.k141_187466                          14766 1 -     27936 g
i Cercopithecus_hamlyni.k141_187466                      I 96 C 0
s Cercopithecus_lowei.k141_1854285                            3630 1 -     17152 g
i Cercopithecus_lowei.k141_1854285                       I 96 C 0
s Cercopithecus_albogularis.ctg5                                38817169 1 +  39242232 g
i Cercopithecus_albogularis.ctg5                               I 96 C 0
s Cercopithecus_mona.ctg39                                21222861 1 -  21565898 g
i Cercopithecus_mona.ctg39                               I 96 C 0
s Cercopithecus_neglectus.k141_2526306                       39979 1 -     53127 g
i Cercopithecus_neglectus.k141_2526306                   I 96 C 0
s Cercopithecus_nictitans.k141_1119862                         230 1 +     13442 g
i Cercopithecus_nictitans.k141_1119862                   I 96 C 0
s Cercopithecus_petaurista.k141_807961                       14779 1 -     27947 g
i Cercopithecus_petaurista.k141_807961                   I 96 C 0
s Cercopithecus_pogonias.k141_822820                         14755 1 +     17596 g
i Cercopithecus_pogonias.k141_822820                     I 96 C 0
s Cercopithecus_roloway.k141_2581234                           802 1 +     14005 g
i Cercopithecus_roloway.k141_2581234                     I 96 C 0
s Cheirogaleus_major.k141_333249                             21148 1 -     52598 A
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16513 1 +     57038 a
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2206961                            176 1 -     15524 g
i Chiropotes_albinasus.k141_2206961                      T 239 I 240
s Chlorocebus_aethiops.ctg25                              18428739 1 -  18827391 g
i Chlorocebus_aethiops.ctg25                             I 96 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15176 1 -     50209 g
i Chlorocebus_pygerythrus.k141_1025673                   I 96 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422176 1 + 135778131 g
i Chlorocebus_sabaeus.CM001947.1                         I 96 C 0
s Colobus_angolensis.KN981557.1                            1910688 1 +   2368649 g
i Colobus_angolensis.KN981557.1                          I 103 C 0
s Colobus_polykomos.k141_906115                              37222 1 +     84244 g
i Colobus_polykomos.k141_906115                          I 103 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28599 1 -     87169 A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537364 1 -  12879189 A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630232 1 +  20541912 a
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673398 1 +   1390856 a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 9
s Diceros_bicornis.DicBicMic_scaffold_5955                    6150 1 +    198055 A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 9
s Eidolon_helvum.KE759718.1                                  10635 1 +     11740 a
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Enhydra_lutris.KZ291758.1                               16329420 1 -  41312741 a
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2145829 1 -  14770903 a
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1283652 1 +   4378816 a
i Equus_asinus.JREZ01000139.1                            C 0 I 9
s Equus_caballus.CM000403.2                               18531472 1 -  39960074 a
i Equus_caballus.CM000403.2                              C 0 I 9
s Equus_przewalskii.KK951119.1                               33501 1 +    498745 a
i Equus_przewalskii.KK951119.1                           C 0 I 9
s Erythrocebus_patas.Contig38                             21205346 1 -  21539334 g
i Erythrocebus_patas.Contig38                            I 96 I 5
s Eulemur_albifrons.k141_342033                              13870 1 -     14127 A
i Eulemur_albifrons.k141_342033                          C 0 I 1
s Eulemur_collaris.k141_377015                                6573 1 -     16928 A
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15597 1 -     25546 A
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12801 1 +     26330 a
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14036 1 +     23973 A
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12798 1 +     75513 a
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10728 1 +     97555 a
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              219 1 +     13026 a
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4272 1 -     17153 A
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13845 1 +    111500 A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237063 1 + 206538554 c
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195906 1 + 205367284 c
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  9650 1 -     36744 C
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     426696 1 -    453645 T
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4386 1 +     11339 t
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            1698 1 +     41679 T
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1267 1 -      9135 g
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 I 1
s Gorilla_beringei.k141_3596273                              16150 1 -     32273 g
i Gorilla_beringei.k141_3596273                          I 117 C 0
s Gorilla_gorilla.LT578341.1                             186338287 1 + 186649187 g
i Gorilla_gorilla.LT578341.1                             I 108 C 0
s Hapalemur_alaotrensis.k141_170648                           6909 1 -     19426 A
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12058 1 -     15286 A
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13697 1 +     18253 a
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13798 1 -     41752 A
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13635 1 -     16460 A
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242432 1 +    327341 A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hoolock_leuconedys.ctg274                                    434955 1 +    630532 g
i Hoolock_leuconedys.ctg274                                 I 110 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45126 1 +     55795 A
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Indri_indri.k141_3655594                                   22589 1 +     31101 a
i Indri_indri.k141_3655594                               C 0 I 1
s Lasiurus_borealis.LasBor_scaffold_32767                    16477 1 -     42476 A
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15524150 1 -  30322482 A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7511 1 +     64341 g
i Leontocebus_fuscicollis.k141_1820339                   C 0 I 283
s Leontocebus_illigeri.k141_3350179                           4834 1 +      4941 g
i Leontocebus_illigeri.k141_3350179                      C 0 I 18
s Leontocebus_nigricollis.k141_4610752                        7552 1 +     35603 g
i Leontocebus_nigricollis.k141_4610752                   C 0 I 270
s Leontopithecus_chrysomelas.k141_1519602                    29013 1 +     38576 g
i Leontopithecus_chrysomelas.k141_1519602                C 0 I 225
s Leontopithecus_rosalia.k141_464620                         25710 1 +     66356 g
i Leontopithecus_rosalia.k141_464620                     C 0 I 228
s Lepilemur_ankaranensis.k141_596936                         11044 1 -     23766 A
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29105 1 +     45836 A
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1645 1 +     25010 A
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27041 1 +     54090 A
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3043159 1 +   3914936 a
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437293 1 +   1826925 g
i Lophocebus_aterrimus.ctg367                            I 94 C 0
s Loris_lydekkerianus.k141_2539221                            5945 1 +     11245 T
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004765 1 +   6120653 T
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17955225 1 -  59628241 a
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               7109 1 +     40492 g
i Macaca_arctoides.k141_2326796                          I 100 C 0
s Macaca_assamensis.Contig5                               59676368 1 +  60120075 g
i Macaca_assamensis.Contig5                              I 100 C 0
s Macaca_cyclopis.k119_18836                                 12884 1 -     26193 g
i Macaca_cyclopis.k119_18836                             I 103 C 0
s Macaca_fascicularis.k141_814140                            80668 1 -    114318 g
i Macaca_fascicularis.k141_814140                        I 103 C 0
s Macaca_fuscata.k119_255327                                  6355 1 -     23192 g
i Macaca_fuscata.k119_255327                             I 99 C 0
s Macaca_leonina.k141_3550399                                15725 1 -     29190 g
i Macaca_leonina.k141_3550399                            C 0 I 103
s Macaca_maura.k141_2733130                                  24393 1 +     37952 g
i Macaca_maura.k141_2733130                              I 103 C 0
s Macaca_mulatta.NC_041758.1                             186839482 1 + 187317192 g
i Macaca_mulatta.NC_041758.1                             I 103 C 0
s Macaca_nemestrina.KQ007038.1                            25457942 1 -  25927173 g
i Macaca_nemestrina.KQ007038.1                           C 0 I 103
s Macaca_nigra.k141_1655396                                  80241 1 +     89720 g
i Macaca_nigra.k141_1655396                              I 103 C 0
s Macaca_radiata.k141_3680011                                 7242 1 +     20474 g
i Macaca_radiata.k141_3680011                            I 103 C 0
s Macaca_siberu.k141_635500                                   6939 1 -     14993 g
i Macaca_siberu.k141_635500                              C 0 I 103
s Macaca_silenus.Contig273                                  329805 1 -    668171 g
i Macaca_silenus.Contig273                               C 0 I 103
s Macaca_thibetana.k99_256239                                 5355 1 -     24072 g
i Macaca_thibetana.k99_256239                            I 100 C 0
s Macaca_tonkeana.k141_1498238                               25980 1 -     45290 g
i Macaca_tonkeana.k141_1498238                           I 103 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90728 1 +     94391 A
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23937568 1 -  24302211 g
i Mandrillus_leucophaeus.scaffold280                     I 96 C 0
s Mandrillus_sphinx.Contig270                               351692 1 +    752769 g
i Mandrillus_sphinx.Contig270                            I 92 C 0
s Manis_javanica.JSZB01003497.1                              18603 1 +    737560 a
i Manis_javanica.JSZB01003497.1                          C 0 I 3
s Manis_pentadactyla.KN006162.1                              50592 1 -    317179 a
i Manis_pentadactyla.KN006162.1                          C 0 I 3
s Megaderma_lyra.MegLyr_scaffold_4542                        10437 1 -    207569 A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 2
s Mellivora_capensis.MelCap_flattened_line_69365             10157 1 +     13704 A
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mico_argentatus.k141_1239457                                5789 1 -      7380 g
i Mico_argentatus.k141_1239457                           C 0 I 240
s Mico_humeralifer.k141_1976199                               4862 1 +     18990 g
i Mico_humeralifer.k141_1976199                          C 0 I 18
s Mico_schneideri.k141_1950671                                      5801 1 -      7356 g
i Mico_schneideri.k141_1950671                                 C 0 I 240
s Microcebus_murinus.CM007674.1                           18291571 1 -  93316391 a
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                15764 1 -     19307 G
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850722 1 +   8254450 a
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34403 1 +     64694 A
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9277 1 -     28506 g
i Miopithecus_ogouensis.k141_534055                      I 80 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6027 1 -      8324 A
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      9116 1 -     37649 A
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141731 1 -    366855 A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35532 1 +     37127 A
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           6926 1 +     14753 A
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mustela_putorius.JH418006.1                               301348 1 -  14710649 a
i Mustela_putorius.JH418006.1                            C 0 I 222
s Myotis_brandtii.KE162005.1                                280569 1 -  10118263 a
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1587831 1 -   6019432 a
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3903923 1 -   4330536 a
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                          75 1 +      1835 A
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 C 0
s Nasalis_larvatus.k141_413338                               15279 1 +     21681 g
i Nasalis_larvatus.k141_413338                           I 107 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20307613 1 +  31847680 a
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149504 1 -   9404916 a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102586309 1 - 196305487 T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              233 1 +      2075 T
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761663 1 + 199412804 T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1363584 1 +   3988456 a
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              506763 1 -   2017862 a
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462452 1 -    559221 a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4225 1 +      8798 T
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696388 1 -   1103335 t
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    44126 1 +     80009 g
i Pan_paniscus.KQ411613.1                                C 0 I 113
s Pan_troglodytes.CM009242.2                             189143141 1 + 189151597 g
i Pan_troglodytes.CM009242.2                             I 1 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  151265 1 +    230217 C
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                264474 1 +  18783137 c
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4721353 1 -   8748460 c
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183443370 1 + 183742232 g
i Papio_anubis.CM001495.2                                I 148 C 0
s Papio_cynocephalus.k141_4307930                             7016 1 +     20448 g
i Papio_cynocephalus.k141_4307930                        I 96 C 0
s Papio_hamadryas.Contig39                                20563828 1 +  20919399 g
i Papio_hamadryas.Contig39                               I 100 C 0
s Papio_kindae.k141_1936966                                   5760 1 +     41871 g
i Papio_kindae.k141_1936966                              I 96 C 0
s Papio_papio.k141_802527                                     9053 1 +     27711 g
i Papio_papio.k141_802527                                I 104 C 0
s Papio_ursinus.k141_3428135                                  9122 1 +      9205 g
i Papio_ursinus.k141_3428135                             I 92 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12762 1 -     78924 C
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10197 1 +     13100 T
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8603 1 +     25941 T
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Piliocolobus_badius.k141_1234363                           43770 1 +     62158 g
i Piliocolobus_badius.k141_1234363                       I 87 C 0
s Piliocolobus_gordonorum.k141_381342                        38517 1 +     89929 g
i Piliocolobus_gordonorum.k141_381342                    I 103 C 0
s Piliocolobus_kirkii.k141_448987                            39933 1 +     51399 g
i Piliocolobus_kirkii.k141_448987                        I 103 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296171 1 -  14605196 g
i Piliocolobus_tephrosceles.PDMG02000141.1               I 103 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1867 1 +     22620 A
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189131277 1 + 189387572 g
i Pongo_abelii.CM009266.2                                I 109 C 0
s Pongo_pygmaeus.ctg66                                     9570884 1 +   9816681 g
i Pongo_pygmaeus.ctg66                                   I 108 C 0
s Presbytis_comata.k141_677006                               73455 1 -     81375 g
i Presbytis_comata.k141_677006                           I 103 C 0
s Presbytis_mitrata.k141_1087752                              5275 1 +     19060 g
i Presbytis_mitrata.k141_1087752                         I 103 C 0
s Prolemur_simus.MPIZ01000396.1                            2596830 1 -   4620579 a
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990812 1 +   2598838 a
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29124 1 +     38485 a
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1167 1 -     13098 A
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26645 1 +     35766 a
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4832 1 -     24134 A
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28657 1 -     67325 A
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4880 1 -      6182 A
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            15186 1 -     21811 a
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40347 1 +     42204 A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22976894 1 +  28871421 a
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                6947 1 -      8028 a
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20274419 1 -  38429054 c
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15288 1 -     91421 g
i Pygathrix_cinerea.k141_1153803                         I 107 C 0
s Pygathrix_nigripes_b.ctg100                                 7609408 1 +   7812017 g
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             15260 1 -     72585 g
i Pygathrix_nigripes_a.k141_215492                         I 107 C 0
s Rhinopithecus_bieti.k119_217274                             6973 1 -     11128 g
i Rhinopithecus_bieti.k119_217274                        I 106 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236320 1 - 195417433 g
i Rhinopithecus_roxellana.NC_044550.1                    I 100 C 0
s Rhinopithecus_strykeri.ctg102                            7671978 1 +   7961872 g
i Rhinopithecus_strykeri.ctg102                          I 106 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87916 1 -     96226 A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               8188 1 -      8359 g
i Saguinus_bicolor.k141_2619299                          C 0 I 18
s Saguinus_imperator.k141_2524406                             2146 1 +      2197 g
i Saguinus_imperator.k141_2524406                        C 0 I 18
s Saguinus_inustus.k141_699149                               13565 1 +     13640 g
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               8434 1 +      8564 g
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469284 1 + 209938924 g
i Saguinus_midas.LG03                                    C 0 I 477
s Saguinus_mystax.k141_374627                                 7990 1 -      9399 g
i Saguinus_mystax.k141_374627                            C 0 I 406
s Saimiri_boliviensis.NW_024100920.1                     119951138 1 - 121099817 a
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23477 1 +     46362 a
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               23572 1 +     45824 a
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             40251 1 -     64574 a
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               3323 1 -     23631 a
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 23468 1 -     61129 a
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420670 1 -   5703754 g
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          55711 1 -     80660 g
i Sapajus_macrocephalus.k141_351809                      C 0 I 368
s Semnopithecus_entellus.k141_11662                          19690 1 -     19888 G
i Semnopithecus_entellus.k141_11662                      C 0 I 9
s Semnopithecus_hypoleucos.k141_1615806                      27002 1 +     39453 g
i Semnopithecus_hypoleucos.k141_1615806                  I 107 C 0
s Semnopithecus_johnii.k141_670120                            7520 1 +     27826 g
i Semnopithecus_johnii.k141_670120                       I 106 C 0
s Semnopithecus_priam.k141_638794                             7042 1 -     19483 g
i Semnopithecus_priam.k141_638794                        I 107 C 0
s Semnopithecus_schistaceus.k141_1572284                       343 1 -     12762 G
i Semnopithecus_schistaceus.k141_1572284                 I 1 C 0
s Semnopithecus_vetulus.k141_910252                            204 1 +     13763 G
i Semnopithecus_vetulus.k141_910252                      I 1 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30849 1 +     97271 A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 6
s Suricata_suricatta.SurSur_flattened_line_6629              18435 1 -    196729 A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6810877 1 +  69701581 a
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                10908 1 +     41958 A
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118866 1 -    156842 A
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 9
s Tapirus_terrestris.TapTer_scaffold_755                    387323 1 +    539355 A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 9
s Tarsius_lariang.k141_2201908                               26443 1 +     70052 g
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1345 1 -     16117 a
i Tarsius_wallacei.k141_254427                           I 69 C 0
s Theropithecus_gelada.CM009954.1                        186428688 1 + 186847797 g
i Theropithecus_gelada.CM009954.1                        I 96 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81305 1 +    610378 A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         11093 1 -     20410 G
i Trachypithecus_auratus.k141_722599                     I 107 C 0
s Trachypithecus_crepusculus.k141_582567                       207 1 -     12674 g
i Trachypithecus_crepusculus.k141_582567                 I 107 C 0
s Trachypithecus_cristatus.k141_580354                       11194 1 +     19930 g
i Trachypithecus_cristatus.k141_580354                   I 107 C 0
s Trachypithecus_francoisi.k141_1412647                       7605 1 -     19997 g
i Trachypithecus_francoisi.k141_1412647                  I 91 C 0
s Trachypithecus_geei.k141_277701                            47744 1 -     60166 g
i Trachypithecus_geei.k141_277701                        I 106 C 0
s Trachypithecus_germaini.k141_912491                        15216 1 -     27529 g
i Trachypithecus_germaini.k141_912491                    I 107 C 0
s Trachypithecus_hatinhensis.k141_143409                     15160 1 -     18194 g
i Trachypithecus_hatinhensis.k141_143409                 I 107 C 0
s Trachypithecus_laotum.k141_907409                           8872 1 -     21137 g
i Trachypithecus_laotum.k141_907409                      I 91 C 0
s Trachypithecus_leucocephalus.k141_587342                    7575 1 -     10723 g
i Trachypithecus_leucocephalus.k141_587342               I 91 C 0
s Trachypithecus_melamera.k141_434728                         6747 1 +      9834 g
i Trachypithecus_melamera.k141_434728                    I 107 C 0
s Trachypithecus_obscurus.k141_190785                        25060 1 +     32220 g
i Trachypithecus_obscurus.k141_190785                    I 107 C 0
s Trachypithecus_phayrei.ctg124                            5939162 1 +   6242583 g
i Trachypithecus_phayrei.ctg124                          I 107 C 0
s Trachypithecus_pileatus.k141_2007326                        8413 1 +     20839 g
i Trachypithecus_pileatus.k141_2007326                   I 106 C 0
s Ursus_maritimus.KK499267.1                               4850547 1 -   5085361 a
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  11490 1 +     50397 A
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11549 1 +     24756 A
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371993 1 -   5488506 a
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10900 1 -     43706 A
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          5476 1 +     86975 a
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Echinops_telfairi.JH980293.1                            48780689 3 + 111700974 I
e Mus_pahari.LT608297.1                                   31355110 4 -  89631738 I
e Mus_spretus.CM004101.1                                  90752512 4 - 130317789 I
e Mus_musculus.chr8                                       87650451 4 - 129401213 I
e Mus_caroli.LT608237.1                                   84361453 4 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      14994 0 +     63895 C
e Xerus_inauris.XerIna_scaffold_2302                          1173 0 +    224448 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   53362 63 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     9322 21 -     10553 I
e Tupaia_chinensis.KB320699.1                              2155905 215 +   4065304 T
e Trichechus_manatus.JH594705.1                            4293354 3 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   6516 8 +      8208 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              105536 5 +    114563 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 72732 9 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Spermophilus_dauricus.KZ294078.1                         1954037 0 -   3870691 C
e Sorex_araneus.JH798187.1                                13651056 93 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               3814 63 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_42075                      411 4 -     30804 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    153257 71 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570713 4 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Psammomys_obesus.NESX01036370.1                            10483 4 -     21651 I
e Procavia_capensis.ProCapCap_scaffold_85530                 13455 3 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     28216 4 -     29689 I
e Peromyscus_maniculatus.KI615324.1                       18194865 4 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Oryctolagus_cuniculus.CM000791.1                        67147416 4 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387               9955 3 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80239 4 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   25239 4 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  746945 0 +  11899542 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Nannospalax_galili.KL204047.1                            2034163 2 -   3037898 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189371 9 +    196477 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     71335 0 -     80779 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              5047 0 +     14296 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11260571 4 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    22438 3 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182333 4 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 32827 16 +    140813 I
e Marmota_marmota.CZRN01000018.1                          33103182 0 -  40650429 C
e Loxodonta_africana.GL010049.1                            4217432 4 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     6537 1 -     14121 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276898 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Ictidomys_tridecemlineatus.JH393364.1                    7520982 0 -   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                      83203 0 +    135385 C
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                1000 3 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20662314 5 +  22651954 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32699 5 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31458 0 +     49224 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Fukomys_damarensis.KN121974.1                             850525 5 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3328282 71 -   7059049 I
e Ellobius_talpinus.LOJH01081419.1                             523 4 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          20392 4 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1097777 3 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    36491 0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            63648 8 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35856 0 +     51376 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    837171 0 +   1526836 C
e Crocidura_indochinensis.CroInd_scaffold_37019               3028 88 -     19598 I
e Cricetulus_griseus.LT883664.1                           11667658 4 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 50291 2 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          14519 0 -     20389 C
e Condylura_cristata.JH655891.1                           17548142 67 -  53390261 I
e Colobus_guereza.LG01                                   199948958 0 + 200372422 C
e Choloepus_hoffmanni.KN194906.1                            173497 9 +    839153 I
e Choloepus_didactylus.ChoDid_scaffold_45914                 18421 8 +     19366 I
e Chinchilla_lanigera.JH722012.1                           1252897 0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_138870             641 8 -      8501 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Castor_canadensis.CasCan_scaffold_2074                    137166 0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                    1149 5 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e CanFam4.chr16                                           17799210 78 -  60362399 I
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      12706 8 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74597 0 -     89534 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     70877 18 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       6779  9 +     62944 a------------------------a---gg-g--a------g-ga
s Acinonyx_jubatus.LLWD01001279.1                           827413  1 -   1699592 a---------------------------------------------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510687  1 -  29979442 a---------------------------------------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             79463  1 -    347723 a---------------------------------------------
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14824 12 -     52922 a------------------------aaagag-a--g------a-ga
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         14740 11 -     28001 a------------------------aaagag-a--g------a-g-
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          5236 12 -     18505 a------------------------aaagag-a--g------a-ga
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           6090 10 -     12518 a------------------------aaagag-a--g------a---
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              7669  9 +     51355 a------------------------a---ag-a--g------a-aa
i Alouatta_belzebul.k141_3560514                         I 197 C 0
s Alouatta_caraya.k141_1701091                                 777 10 -     36483 a------------------------a---ag-a--g------aaaa
i Alouatta_caraya.k141_1701091                           I 183 C 0
s Alouatta_discolor.k141_566626                              11229  9 +     28687 a------------------------a---ag-a--g------a-aa
i Alouatta_discolor.k141_566626                          C 0 I 4
s Alouatta_juara.k141_1509701                                25053 10 +     25266 a------------------------a---ag-a--g------aaaa
i Alouatta_juara.k141_1509701                            I 194 C 0
s Alouatta_macconnelli.k141_918386                             774 10 -      9457 a------------------------a---ag-a--g------aaaa
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_3472759                            18360 10 -     18578 a------------------------a---ag-a--g------aaaa
i Alouatta_nigerrima.k141_3472759                        I 194 C 0
s Alouatta_palliata.k141_2135620                              3744  9 +     47717 a------------------------a---ag-a--g------a-aa
i Alouatta_palliata.k141_2135620                         I 191 C 0
s Alouatta_puruensis.k141_362188                               456 10 +      5663 a------------------------a---ag-a--g------aaaa
i Alouatta_puruensis.k141_362188                         I 198 C 0
s Alouatta_seniculus.k141_117119                             14908 10 +     50774 A------------------------A---AG-A--G------AAAA
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185459  1 +    412891 A---------------------------------------------
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  15696  9 -     33861 a------------------------a---ag-a--g------a-aa
i Aotus_azarae.k141_3104676                              I 201 C 0
s Aotus_griseimembra.k141_2240599                            15732  9 -     34016 a------------------------a---ag-a--g------a-aa
i Aotus_griseimembra.k141_2240599                        I 217 C 0
s Aotus_nancymaae.KZ198451.1                               4298120  9 -   5030052 a------------------------a---ag-a--g------a-aa
i Aotus_nancymaae.KZ198451.1                             I 208 C 0
s Aotus_trivirgatus.k141_2152450                             15730  9 -     34685 a------------------------a---ag-a--g------a-aa
i Aotus_trivirgatus.k141_2152450                         I 213 C 0
s Aotus_vociferans.k141_344750                               28854  9 -     47192 a------------------------a---ag-a--g------a-aa
i Aotus_vociferans.k141_344750                           I 213 C 0
s Arctocebus_calabarensis.k141_2318572                       11563  6 +     14667 A------------------------G---AA-A--A----------
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4867  1 +     43469 A---------------------------------------------
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  53769  9 -     92717 A------------------------G---AA-A--A------A-GA
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54396  9 +     85213 A------------------------G---AA-A--A------A-GA
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             5516  9 -     10423 a------------------------a---ag-a--g------a-aa
i Callibella_humilis.k141_1278103                        I 266 C 0
s Callimico_goeldii.k141_1091182                             24991  3 +     31915 ------------------------------------------a-aa
i Callimico_goeldii.k141_1091182                         I 270 C 0
s Callithrix_geoffroyi.k119_512088                            5216  9 +      5267 c------------------------a---gg-g--a------g-gg
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590670  9 - 189096842 a------------------------a---ag-a--g------a-aa
i Callithrix_jacchus.pat_scaffold_3                      I 240 C 0
s Callithrix_kuhlii.k119_1164682                             11961  9 -     12001 G------------------------A---GG-G--A------G-GG
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1154  1 -     12242 ---------------------------------------------G
i Capromys_pilorides.CapPil_scaffold_65020               I 5 C 0
s Camelus_bactrianus.KN276810.1                           10002494  1 -  17673402 a---------------------------------------------
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334952  1 -   7040546 a---------------------------------------------
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  403235  1 -   1652518 a---------------------------------------------
i Camelus_ferus.KB017975.1                               C 0 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    185335  1 -    185531 A---------------------------------------------
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034721  1 -   9314153 a---------------------------------------------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17958986  1 -  59632846 a---------------------------------------------
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18500498  1 +  63665305 a---------------------------------------------
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007247396.1                           201437  9 +    308752 a------------------------a---gg-a--a------g-ga
i Carlito_syrichta.NW_007247396.1                        C 0 I 8
s Castor_canadensis.CasCan_scaffold_2074                    137166  4 +    179628 -------------------------G---GA-A-------------
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 2
s Carollia_perspicillata.CarPer_scaffold_92756                5221  1 -     11696 A---------------------------------------------
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     93131  1 +    217609 A---------------------------------------------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                         10151  9 -     11392 a------------------------a---ag-a--g------a-aa
i Cebuella_niveiventris.k141_1251222                     I 276 C 0
s Cebuella_pygmaea.k141_1309012                               6219  9 -      7577 a------------------------a---ag-a--g------a-aa
i Cebuella_pygmaea.k141_1309012                          I 246 C 0
s Cebus_albifrons.Contig27                                25652433 15 +  26074798 a------------------------a---gg-g--aaggagga-gg
i Cebus_albifrons.Contig27                               T 449 I 443
s Cebus_olivaceus.k141_1764483                                 826  9 +     28840 a------------------------a---ag-a--g------a-aa
i Cebus_olivaceus.k141_1764483                           I 3 C 0
s Cebus_unicolor.k141_1837183                                  551  9 +     14051 a------------------------a---ag-a--g------a-aa
i Cebus_unicolor.k141_1837183                            I 2 C 0
s Cephalopachus_bancanus.k141_1423433                         5442  9 +     31688 a------------------------a---gg-a--a------g-ga
i Cephalopachus_bancanus.k141_1423433                    C 0 I 114
s Ceratotherium_simum.JH767749.1                          12231557  1 +  27778364 a---------------------------------------------
i Ceratotherium_simum.JH767749.1                         I 9 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2584  1 -     25243 A---------------------------------------------
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 9 C 0
s Cercocebus_atys.KQ010504.1                               4475749 12 +   4669795 a------------------------aaagag-a--g------a-ga
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                         253 12 +     17872 a------------------------aaagag-a--g------a-ga
i Cercocebus_chrysogaster.k141_1540778                   n 27 C 0
s Cercocebus_lunulatus.k141_3342297                            910 12 -     14043 a------------------------aaagag-a--g------a-ga
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           8943 12 +     27781 a------------------------aaagag-a--g------a-ga
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         9111 12 -     20310 a------------------------aaagag-a--g------a-ga
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          12091 12 +     29689 a------------------------aaagag-a--g------a-ga
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            6844 12 -     20078 a------------------------aaagag-a--g------a-ga
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          14767 12 -     27936 a------------------------aaagag-a--g------a-aa
i Cercopithecus_hamlyni.k141_187466                      C 0 T 100
s Cercopithecus_lowei.k141_1854285                            3631 12 -     17152 a------------------------agagag-a--g------a-ga
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38817170 12 +  39242232 a------------------------aaagag-a--g------a-ga
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222862 12 -  21565898 a------------------------agagag-a--g------a-ga
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       39980 12 -     53127 a------------------------agagag-a--g------a-ga
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                         231 12 +     13442 a------------------------aaagag-a--g------a-ga
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14780 12 -     27947 a------------------------agagag-a--g------a-ga
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         14756 12 +     17596 a------------------------agagag-a--g------a-ga
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                           803 12 +     14005 a------------------------aaagag-a--g------a-ga
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheirogaleus_major.k141_333249                             21149  9 -     52598 A------------------------G---AA-A--A------A-GA
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16514  9 +     57038 a------------------------g---aa-a--a------a-ga
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1252897  4 +   2543920 -------------------------a---ga-a-------------
i Chinchilla_lanigera.JH722012.1                         C 0 I 2
s Chiropotes_albinasus.k141_2206961                            417  9 -     15524 a------------------------a---ag-a--g------a-aa
i Chiropotes_albinasus.k141_2206961                      I 240 C 0
s Chlorocebus_aethiops.ctg25                              18428740 12 -  18827391 a------------------------aaagaG-a--g------a-ga
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15177 12 -     50209 a------------------------aaagag-a--g------a-ga
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422177 12 + 135778131 a------------------------aaagag-a--g------a-ga
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1910689 12 +   2368649 a------------------------aaagag-a--g------a-ga
i Colobus_angolensis.KN981557.1                          C 0 T 106
s Colobus_guereza.LG01                                   199948958  4 + 200372422 -----------------------------------G------A-GT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37223  8 +     84244 a------------------------aaagag-a-------------
i Colobus_polykomos.k141_906115                          C 0 T 102
s Ctenodactylus_gundi.CteGun_scaffold_65                    837171  4 +   1526836 -------------------------G---GG-A-------------
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 2
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35856  4 +     51376 -------------------------G---GA-A-------------
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 2
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14519  1 -     20389 A---------------------------------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28600  1 -     87169 A---------------------------------------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537365  9 -  12879189 A------------------------G---AA-A--A------A-GA
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36491  4 +     67921 -------------------------A---GA-A-------------
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 2
s Erythrocebus_patas.Contig38                             21205352  5 -  21539334 --------------------------------a--g------a-ga
i Erythrocebus_patas.Contig38                            I 5 C 0
s Eulemur_albifrons.k141_342033                              13872  1 -     14127 --------------------------------------------G-
i Eulemur_albifrons.k141_342033                          I 1 C 0
s Desmodus_rotundus.KZ672289.1                             8630233  1 +  20541912 a---------------------------------------------
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673408  1 +   1390856 a---------------------------------------------
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 9 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6160  1 +    198055 A---------------------------------------------
i Diceros_bicornis.DicBicMic_scaffold_5955               I 9 C 0
s Eidolon_helvum.KE759718.1                                  10636  1 +     11740 a---------------------------------------------
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Enhydra_lutris.KZ291758.1                               16329421  1 -  41312741 a---------------------------------------------
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2145830  1 -  14770903 a---------------------------------------------
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1283662  1 +   4378816 a---------------------------------------------
i Equus_asinus.JREZ01000139.1                            I 9 C 0
s Equus_caballus.CM000403.2                               18531482  1 -  39960074 a---------------------------------------------
i Equus_caballus.CM000403.2                              I 9 C 0
s Equus_przewalskii.KK951119.1                               33511  1 +    498745 a---------------------------------------------
i Equus_przewalskii.KK951119.1                           I 9 C 0
s Eulemur_collaris.k141_377015                                6574  8 -     16928 A------------------------G---AA-A--A------A-G-
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15598  8 -     25546 A------------------------G---AA-A--A------A-G-
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12802  8 +     26330 a------------------------g---aa-a--a------a-g-
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14037  8 +     23973 A------------------------G---AA-A--A------A-G-
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12799  8 +     75513 a------------------------g---aa-a--a------a-g-
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10729  8 +     97555 a------------------------g---aa-a--a------a-g-
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              220  8 +     13026 a------------------------g---aa-a--a------a-g-
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4273  8 -     17153 A------------------------G---AA-A--A------A-G-
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13846  8 +    111500 A------------------------G---AA-A--A------A-G-
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Fukomys_damarensis.KN121974.1                             850530  1 +   3816255 ---------------------------------------------g
i Fukomys_damarensis.KN121974.1                          I 5 C 0
s Felis_catus.CM001381.2                                  20237064  1 + 206538554 a---------------------------------------------
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195907  1 + 205367284 a---------------------------------------------
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  9651  1 -     36744 A---------------------------------------------
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     426697  9 -    453645 A------------------------G---AA-A--A------A-GA
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4387  9 +     11339 a------------------------g---aa-a--a------a-ga
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1269  9 -      9135 a------------------------g---gg-a--g------g-ga
i Galeopterus_variegatus.GalVar_scaffold_108840          I 1 C 0
s Glis_glis.GliGli_scaffold_19807                            31458  4 +     49224 -------------------------G---TG-A-------------
i Glis_glis.GliGli_scaffold_19807                        C 0 I 2
s Gorilla_beringei.k141_3596273                              16151  9 -     32273 a------------------------g---ag-a--a------a-aa
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186338288  9 + 186649187 a------------------------g---ag-a--a------a-aa
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   32704  1 +     78134 ---------------------------------------------C
i Graphiurus_murinus.GraMur_scaffold_10447               I 5 C 0
s Hapalemur_alaotrensis.k141_170648                           6910  8 -     19426 A------------------------G---AA-A--A------A-G-
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12059  8 -     15286 A------------------------G---AA-A--A------A-G-
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13698  8 +     18253 a------------------------g---aa-a--a------a-g-
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13799  8 -     41752 A------------------------G---AA-A--A------A-G-
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13636  8 -     16460 A------------------------G---AA-A--A------A-G-
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20662319  1 +  22651954 ---------------------------------------------g
i Heterocephalus_glaber.JH602082.1                       I 5 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242433  1 +    327341 A---------------------------------------------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hoolock_leuconedys.ctg274                                    434956  9 +    630532 a------------------------g---ag-a--a------a-aa
i Hoolock_leuconedys.ctg274                                 C 0 T 110
s Hystrix_cristata.HysCri_scaffold_5660                      83203  4 +    135385 -------------------------A---GA-G-------------
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 2
s Ictidomys_tridecemlineatus.JH393364.1                    7520982  4 -   7955117 -------------------------g---ag-a-------------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 2
s Indri_indri.k141_3655594                                   22591  8 +     31101 -------------------------g---aa-a--a------a-ga
i Indri_indri.k141_3655594                               I 1 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45127  1 +     55795 A---------------------------------------------
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    16478  1 -     42476 A---------------------------------------------
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15524151  8 -  30322482 A------------------------G---AA-A--A------A-G-
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7795  9 +     64341 a------------------------a---ag-a--g------a-aa
i Leontocebus_fuscicollis.k141_1820339                   I 283 C 0
s Leontocebus_illigeri.k141_1304848                            135  9 -     35062 a------------------------a---ag-a--g------a-aa
i Leontocebus_illigeri.k141_1304848                      I 2 C 0
s Leontocebus_nigricollis.k141_4610752                        7823  9 +     35603 a------------------------a---ag-a--g------a-aa
i Leontocebus_nigricollis.k141_4610752                   I 270 C 0
s Leontopithecus_chrysomelas.k141_1519602                    29239  9 +     38576 a------------------------c---ag-a--g------a-aa
i Leontopithecus_chrysomelas.k141_1519602                I 225 C 0
s Leontopithecus_rosalia.k141_464620                         25939  9 +     66356 a------------------------t---cg-a--g------a-aa
i Leontopithecus_rosalia.k141_464620                     I 228 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6538  5 -     14121 --------------------------------a--g------g-ga
i Lepus_americanus.LepAme_scaffold_107385                I 1 C 0
s Lepilemur_ankaranensis.k141_596936                         11045  3 -     23766 A------------------------G---A----------------
i Lepilemur_ankaranensis.k141_596936                     C 0 I 2
s Lepilemur_dorsalis.k141_577674                             29106  3 +     45836 A------------------------G---A----------------
i Lepilemur_dorsalis.k141_577674                         C 0 I 2
s Lepilemur_ruficaudatus.k141_121139                          1646  3 +     25010 A------------------------G---A----------------
i Lepilemur_ruficaudatus.k141_121139                     C 0 I 1
s Lepilemur_septentrionalis.k141_185316                      27042  3 +     54090 A------------------------G---A----------------
i Lepilemur_septentrionalis.k141_185316                  C 0 I 2
s Leptonychotes_weddellii.KB714746.1                       3043160  1 +   3914936 a---------------------------------------------
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437294 12 +   1826925 a------------------------aaagag-a--g------a-ga
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5946  9 +     11245 A------------------------G---AA-A--A------A-GA
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004766  9 +   6120653 A------------------------G---AA-A--A------A-GA
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17955226  1 -  59628241 a---------------------------------------------
i Lycaon_pictus.CM007581.1                               C 0 I 211
s Macaca_arctoides.k141_2326796                               7110 12 +     40492 a------------------------aaagag-a--g------a-ga
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59676369 12 +  60120075 a------------------------aaagag-a--g------a-ga
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 12885 12 -     26193 a------------------------aaagag-a--g------a-ga
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            80669 12 -    114318 a------------------------aaagag-a--g------a-ga
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  6356 12 -     23192 a------------------------aaagag-a--g------a-ga
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                15829 12 -     29190 a------------------------aaagag-a--g------a-ga
i Macaca_leonina.k141_3550399                            I 103 C 0
s Macaca_maura.k141_2733130                                  24394 12 +     37952 a------------------------aaagag-a--g------a-ga
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186839483 12 + 187317192 a------------------------aaagag-a--g------a-ga
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458046 12 -  25927173 a------------------------aaagag-a--g------a-ga
i Macaca_nemestrina.KQ007038.1                           I 103 C 0
s Macaca_nigra.k141_1655396                                  80242 12 +     89720 a------------------------aaagag-a--g------a-ga
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 7243 12 +     20474 a------------------------aaagag-a--g------a-ga
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   7043 12 -     14993 a------------------------aaagag-a--g------a-ga
i Macaca_siberu.k141_635500                              I 103 C 0
s Macaca_silenus.Contig273                                  329909 12 -    668171 a------------------------aaagag-a--g------a-ga
i Macaca_silenus.Contig273                               I 103 C 0
s Macaca_thibetana.k99_256239                                 5356 12 -     24072 a------------------------aaagag-a--g------a-ga
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               25981 12 -     45290 a------------------------aaagag-a--g------a-ga
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90729  1 +     94391 A---------------------------------------------
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23937569 12 -  24302211 a------------------------aaagag-a--g------a-ga
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               351693 12 +    752769 a------------------------aaagag-a--g------a-ga
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33103182  4 -  40650429 -------------------------g---ag-g-------------
i Marmota_marmota.CZRN01000018.1                         C 0 I 2
s Manis_javanica.JSZB01003497.1                              18607  1 +    737560 a---------------------------------------------
i Manis_javanica.JSZB01003497.1                          I 3 C 0
s Manis_pentadactyla.KN006162.1                              50596  1 -    317179 a---------------------------------------------
i Manis_pentadactyla.KN006162.1                          I 3 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        10440  1 -    207569 A---------------------------------------------
i Megaderma_lyra.MegLyr_scaffold_4542                    I 2 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10158  1 +     13704 A---------------------------------------------
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mico_argentatus.k141_1239457                                6030  9 -      7380 a------------------------a---ag-a--g------a-aa
i Mico_argentatus.k141_1239457                           I 240 C 0
s Mico_humeralifer.k141_2457295                                259  9 +      1079 a------------------------a---ag-a--g------a-aa
i Mico_humeralifer.k141_2457295                          I 4 C 0
s Mico_schneideri.k141_1950671                                      6042  9 -      7356 a------------------------a---ag-a--g------a-aa
i Mico_schneideri.k141_1950671                                 I 240 C 0
s Microcebus_murinus.CM007674.1                           18291572  9 -  93316391 a------------------------g---ga-a--a------a-ga
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                15765  1 -     19307 A---------------------------------------------
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850723  1 +   8254450 a---------------------------------------------
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34404  1 +     64694 A---------------------------------------------
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9278 12 -     28506 a------------------------aaagag-a--g------a-ga
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6028  1 -      8324 A---------------------------------------------
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      9117  9 -     37649 A------------------------G---AA-A--A------A-GA
i Mirza_zaza.k141_952172                                 C 0 I 3
s Muscardinus_avellanarius.MusAve_scaffold_82313              5047  4 +     14296 -------------------------G---GG-A-------------
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 2
s Myocastor_coypus.MyoCoy_scaffold_10123                     71335  4 -     80779 -------------------------G---GA-A-------------
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 I 2
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141732  1 -    366855 A---------------------------------------------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35533  1 +     37127 A---------------------------------------------
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           6927  1 +     14753 A---------------------------------------------
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mustela_putorius.JH418006.1                               301571  1 -  14710649 a---------------------------------------------
i Mustela_putorius.JH418006.1                            I 222 C 0
s Myotis_brandtii.KE162005.1                                280570  1 -  10118263 a---------------------------------------------
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1587832  1 -   6019432 a---------------------------------------------
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3903924  1 -   4330536 a---------------------------------------------
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                          76  1 +      1835 A---------------------------------------------
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 C 0
s Nasalis_larvatus.k141_413338                               15280 12 +     21681 a------------------------aaagag-a--g------a-ga
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20307614  1 +  31847680 a---------------------------------------------
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149505  1 -   9404916 a---------------------------------------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102586310  9 - 196305487 A------------------------G---AA-A--A------A-GG
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              234  9 +      2075 A------------------------g---aa-a--a------a-gg
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761664  9 + 199412804 A------------------------G---AA-A--A------A-GG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1363585 34 +   3988456 aagggaagaagaaagtaggaaggaaa---ggaa--g------g-aa
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147420  2 + 174332312 --------------------------------------------ga
i Oryctolagus_cuniculus.CM000791.1                       I 4 C 0
s Octodon_degus.JH651603.1                                  746945  4 +  11899542 -------------------------g---ga-a-------------
i Octodon_degus.JH651603.1                               C 0 I 2
s Odobenus_rosmarus.KB229312.1                              506764  1 -   2017862 a---------------------------------------------
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462453  1 -    559221 a---------------------------------------------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4226  7 +      8798 A------------------------G---AA-A--A------A---
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696389  7 -   1103335 a------------------------g---aa-a--a------a---
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    44240  9 +     80009 a------------------------g---ag-a--a------a-aa
i Pan_paniscus.KQ411613.1                                I 113 I 2
s Pan_troglodytes.CM009242.2                             189143142  9 + 189151597 a------------------------g---ag-a--a------a-aa
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  151266  1 +    230217 A---------------------------------------------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                264475  1 +  18783137 a---------------------------------------------
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4721354  1 -   8748460 a---------------------------------------------
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183443371 12 + 183742232 a------------------------aaagag-a--g------a-ga
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7017 12 +     20448 a------------------------aaagag-a--g------a-ga
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563829 12 +  20919399 a------------------------aaagag-a--g------a-ga
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   5761 12 +     41871 a------------------------aaagag-a--g------a-ga
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     9054 12 +     27711 a------------------------aaagag-a--g------a-ga
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  9123 12 +      9205 a------------------------aaagag-a--g------a-ga
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12763  1 -     78924 A---------------------------------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10198  9 +     13100 A------------------------G---AA-A--A------C-GA
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8604  9 +     25941 A------------------------G---AA-A--A------C-GA
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28220  1 -     29689 ---------------------------------------------G
i Petromus_typicus.PetTyp_scaffold_42190                 I 4 C 0
s Piliocolobus_badius.k141_1234363                           43771 12 +     62158 a------------------------aaagag-a--g------a-ga
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        38518 12 +     89929 a------------------------aaagag-a--c------a-ga
i Piliocolobus_gordonorum.k141_381342                    C 0 T 106
s Piliocolobus_kirkii.k141_448987                            39934 12 +     51399 a------------------------aaagag-a--c------a-ga
i Piliocolobus_kirkii.k141_448987                        C 0 T 106
s Piliocolobus_tephrosceles.PDMG02000141.1                14296172 12 -  14605196 a------------------------aaagag-a--g------a-ga
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 T 106
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1868  1 +     22620 A---------------------------------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189131278  9 + 189387572 a------------------------g---aa-a--a------a-aa
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570885  9 +   9816681 a------------------------g---aa-a--a------a-aa
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               73456 12 -     81375 a------------------------aaagag-a--G------A-GA
i Presbytis_comata.k141_677006                           C 0 T 106
s Presbytis_mitrata.k141_1087752                              5276 12 +     19060 a------------------------aaagag-a--g------a-ga
i Presbytis_mitrata.k141_1087752                         C 0 T 106
s Prolemur_simus.MPIZ01000396.1                            2596831  8 -   4620579 a------------------------g---aa-a--a------a-g-
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990813  9 +   2598838 a------------------------g---aa-a--a------a-ga
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29125  9 +     38485 a------------------------g---aa-a--a------a-ga
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1168  9 -     13098 A------------------------G---AA-A--A------A-GA
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26646  9 +     35766 a------------------------g---aa-a--a------a-ga
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4833  9 -     24134 A------------------------G---AA-A--A------A-GA
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28658  9 -     67325 A------------------------G---AA-A--A------A-GA
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4881  9 -      6182 A------------------------G---AA-A--A------A-GA
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            15187  1 -     21811 a---------------------------------------------
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40348  1 +     42204 A---------------------------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22976895  1 +  28871421 a---------------------------------------------
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                6948  1 -      8028 a---------------------------------------------
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20274420  1 -  38429054 a---------------------------------------------
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15289 12 -     91421 a------------------------aaagag-a--g------a-ga
i Pygathrix_cinerea.k141_1153803                         C 0 T 110
s Pygathrix_nigripes_b.ctg100                                 7609409 12 +   7812017 a------------------------aaagag-a--g------a-ga
i Pygathrix_nigripes_b.ctg100                               C 0 T 110
s Pygathrix_nigripes_a.k141_215492                             15261 12 -     72585 a------------------------aaaGag-a--g------a-ga
i Pygathrix_nigripes_a.k141_215492                         C 0 T 110
s Rhinopithecus_bieti.k119_217274                             6974 10 -     11128 a------------------------a--gag-a--g------a-ga
i Rhinopithecus_bieti.k119_217274                        C 0 T 107
s Rhinopithecus_roxellana.NC_044550.1                     91236321 12 - 195417433 a------------------------aaagag-a--g------a-ga
i Rhinopithecus_roxellana.NC_044550.1                    C 0 T 103
s Rhinopithecus_strykeri.ctg102                            7671979 10 +   7961872 a------------------------a--gag-a--g------a-ga
i Rhinopithecus_strykeri.ctg102                          C 0 T 107
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87917  1 -     96226 A---------------------------------------------
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_8081                                   411  9 +     42994 a------------------------a---ag-a--g------a-aa
i Saguinus_bicolor.k141_8081                             I 2 C 0
s Saguinus_imperator.k141_57697                                196  9 +      1030 a------------------------a---ag-a--g------a-aa
i Saguinus_imperator.k141_57697                          I 2 C 0
s Saguinus_inustus.k141_699149                               13566  9 +     13640 g------------------------a---ag-g--a------g-gg
i Saguinus_inustus.k141_699149                           C 0 I 9
s Saguinus_labiatus.k141_285685                               8435  9 +      8564 g------------------------a---ag-g--a------g-gg
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469762  9 + 209938924 a------------------------a---ag-a--g------a-aa
i Saguinus_midas.LG03                                    I 477 C 0
s Saguinus_mystax.k141_374627                                 8397  9 -      9399 a------------------------a---ag-a--g------a-aa
i Saguinus_mystax.k141_374627                            I 406 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951139  9 - 121099817 a------------------------a---ag-a--g------a-aa
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23478  9 +     46362 a------------------------a---ag-a--g------a-aa
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               23573  9 +     45824 a------------------------a---ag-a--g------a-aa
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             40252  9 -     64574 a------------------------a---ag-a--g------a-aa
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               3324  9 -     23631 a------------------------a---ag-a--g------a-aa
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 23469  9 -     61129 a------------------------a---ag-a--g------a-aa
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420671  9 -   5703754 g------------------------a---gg-g--a------g-gg
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          56080  9 -     80660 a------------------------a---ag-a--g------a-aa
i Sapajus_macrocephalus.k141_351809                      I 368 C 0
s Semnopithecus_entellus.k141_1672505                          153 12 -     12572 A------------------------AAAGAG-A--G------A-GA
i Semnopithecus_entellus.k141_1672505                    I 2 I 8
s Semnopithecus_hypoleucos.k141_1615806                      27003 12 +     39453 a------------------------aaagag-a--g------a-ga
i Semnopithecus_hypoleucos.k141_1615806                  C 0 T 110
s Semnopithecus_johnii.k141_670120                            7521 12 +     27826 a------------------------aaagag-a--g------a-ga
i Semnopithecus_johnii.k141_670120                       C 0 T 109
s Semnopithecus_priam.k141_638794                             7043 12 -     19483 a------------------------aaaGag-a--g------a-ga
i Semnopithecus_priam.k141_638794                        C 0 T 110
s Semnopithecus_schistaceus.k141_1572284                       344 12 -     12762 A------------------------AAAGAG-A--G------A-GA
i Semnopithecus_schistaceus.k141_1572284                 C 0 I 8
s Semnopithecus_vetulus.k141_910252                            205 12 +     13763 A------------------------AAagag-a--g------a-ga
i Semnopithecus_vetulus.k141_910252                      C 0 I 8
s Spermophilus_dauricus.KZ294078.1                         1954037  4 -   3870691 -------------------------g---ag-a-------------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 2
s Suricata_suricatta.SurSur_flattened_line_6629              18436  1 -    196729 A---------------------------------------------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6810878  1 +  69701581 a---------------------------------------------
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                10909  1 +     41958 A---------------------------------------------
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118876  1 -    156842 A---------------------------------------------
i Tapirus_indicus.TapInd_scaffold_9301                   I 9 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387333  1 +    539355 A---------------------------------------------
i Tapirus_terrestris.TapTer_scaffold_755                 I 9 C 0
s Tarsius_lariang.k141_2201908                               26444  9 +     70052 a------------------------a---gg-a--a------g-ga
i Tarsius_lariang.k141_2201908                           C 0 I 105
s Tarsius_wallacei.k141_254427                                1346  9 -     16117 a------------------------g---ag-a--g------a-ga
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428689 12 + 186847797 a------------------------aaagag-a--g------a-ga
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105541  1 +    114563 ---------------------------------------------G
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 5 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81306  1 +    610378 A---------------------------------------------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         11094 12 -     20410 a------------------------aaagag-a--g------a-ga
i Trachypithecus_auratus.k141_722599                     C 0 T 110
s Trachypithecus_crepusculus.k141_582567                       208 12 -     12674 a------------------------aaagag-a--g------a-ga
i Trachypithecus_crepusculus.k141_582567                 C 0 T 110
s Trachypithecus_cristatus.k141_580354                       11195 12 +     19930 a------------------------aaagag-a--g------a-ga
i Trachypithecus_cristatus.k141_580354                   C 0 T 110
s Trachypithecus_francoisi.k141_1412647                       7606 12 -     19997 a------------------------aaagag-a--g------a-ga
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            47745 12 -     60166 a------------------------aaagag-a--g------a-ga
i Trachypithecus_geei.k141_277701                        C 0 T 109
s Trachypithecus_germaini.k141_912491                        15217 12 -     27529 a------------------------aaagag-a--g------a-ga
i Trachypithecus_germaini.k141_912491                    C 0 T 110
s Trachypithecus_hatinhensis.k141_143409                     15161 12 -     18194 a------------------------aaagag-a--g------a-ga
i Trachypithecus_hatinhensis.k141_143409                 C 0 T 110
s Trachypithecus_laotum.k141_907409                           8873 12 -     21137 a------------------------aaagag-a--g------a-ga
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    7576 12 -     10723 a------------------------aaagag-a--g------a-ga
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         6748 12 +      9834 a------------------------aaagag-a--g------a-ga
i Trachypithecus_melamera.k141_434728                    C 0 T 110
s Trachypithecus_obscurus.k141_190785                        25061 12 +     32220 g------------------------agagag-a--g------a-ga
i Trachypithecus_obscurus.k141_190785                    C 0 T 110
s Trachypithecus_phayrei.ctg124                            5939163 12 +   6242583 a------------------------aaagag-a--g------a-ga
i Trachypithecus_phayrei.ctg124                          C 0 T 110
s Trachypithecus_pileatus.k141_2007326                        8414 12 +     20839 a------------------------aaagag-a--g------a-ga
i Trachypithecus_pileatus.k141_2007326                   C 0 T 109
s Ursus_maritimus.KK499267.1                               4850548  1 -   5085361 a---------------------------------------------
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  11491  9 +     50397 A------------------------G---AA-A--A------A-GA
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11550  9 +     24756 A------------------------G---AA-A--A------A-GA
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371994  1 -   5488506 a---------------------------------------------
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10901  1 -     43706 A---------------------------------------------
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          5477  1 +     86975 g---------------------------------------------
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Echinops_telfairi.JH980293.1                            48780689  3 + 111700974 I
e Mus_pahari.LT608297.1                                   31355110  4 -  89631738 I
e Mus_spretus.CM004101.1                                  90752512  4 - 130317789 I
e Mus_musculus.chr8                                       87650451  4 - 129401213 I
e Mus_caroli.LT608237.1                                   84361453  4 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      14994  0 +     63895 C
e Xerus_inauris.XerIna_scaffold_2302                          1173  0 +    224448 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   53362 63 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     9322 21 -     10553 I
e Tupaia_chinensis.KB320699.1                              2155905 215 +   4065304 T
e Trichechus_manatus.JH594705.1                            4293354  3 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   6516  8 +      8208 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 72732  9 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             30850  6 +     97271 I
e Sorex_araneus.JH798187.1                                13651056 93 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               3814 63 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_42075                      411  4 -     30804 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    153257 71 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570713  4 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Psammomys_obesus.NESX01036370.1                            10483  4 -     21651 I
e Procavia_capensis.ProCapCap_scaffold_85530                 13455  3 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Peromyscus_maniculatus.KI615324.1                       18194865  4 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orycteropus_afer.OryAfe_flattened_line_144387               9955  3 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80239  4 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   25239  4 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Nannospalax_galili.KL204047.1                            2034163  2 -   3037898 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189371  9 +    196477 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11260571  4 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    22438  3 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182333  4 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 32827 16 +    140813 I
e Loxodonta_africana.GL010049.1                            4217432  4 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276898  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                1000  3 +      7595 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Galagoides_demidoff.k141_1711393                            1699  0 +     41679 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3328282 71 -   7059049 I
e Ellobius_talpinus.LOJH01081419.1                             523  4 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          20392  4 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1097777  3 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            63648  8 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Crocidura_indochinensis.CroInd_scaffold_37019               3028 88 -     19598 I
e Cricetulus_griseus.LT883664.1                           11667658  4 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 50291  2 +     63868 I
e Condylura_cristata.JH655891.1                           17548142 67 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            173497  9 +    839153 I
e Choloepus_didactylus.ChoDid_scaffold_45914                 18421  8 +     19366 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870             641  8 -      8501 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e CanFam4.chr16                                           17799210 78 -  60362399 I
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      12706  8 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74597  0 -     89534 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     70877 18 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       6788  8 +     62944 a-g----------------g------a-ag----ga
s Allenopithecus_nigroviridis.k141_3361533                   14836  8 -     52922 a-a----------------a------a-ag----ac
i Allenopithecus_nigroviridis.k141_3361533               C 0 T 123
s Allochrocebus_lhoesti.k141_4309873                         14751  7 -     28001 --a----------------a------a-ag----ac
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          5248  8 -     18505 a-a----------------a------a-ag----ac
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           6100  8 -     12518 g-a----------------a------a-ag----ac
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              7678 11 +     51355 a-a----------------agga---a-ag----gg
i Alouatta_belzebul.k141_3560514                         C 0 T 199
s Alouatta_caraya.k141_1701091                                 787 11 -     36483 a-a----------------agga---a-ag----gg
i Alouatta_caraya.k141_1701091                           C 0 T 194
s Alouatta_discolor.k141_566626                              11242  5 +     28687 --------------------------a-ag----gg
i Alouatta_discolor.k141_566626                          I 4 I 8
s Alouatta_juara.k141_1509701                                25063 11 +     25266 a-a----------------agga---a-ag----gg
i Alouatta_juara.k141_1509701                            C 0 T 197
s Alouatta_macconnelli.k141_918386                             784 11 -      9457 a-a----------------agga---a-ag----gg
i Alouatta_macconnelli.k141_918386                       C 0 T 197
s Alouatta_nigerrima.k141_3472759                            18370 11 -     18578 a-a----------------agga---a-ag----gg
i Alouatta_nigerrima.k141_3472759                        C 0 T 197
s Alouatta_palliata.k141_2135620                              3753 12 +     47717 a-a----------------a--aggaa-ag----gg
i Alouatta_palliata.k141_2135620                         C 0 T 194
s Alouatta_puruensis.k141_362188                               466 11 +      5663 a-a----------------agga---a-ag----gg
i Alouatta_puruensis.k141_362188                         C 0 T 201
s Alouatta_seniculus.k141_117119                             14918 11 +     50774 A-A----------------A--GGA-A-ag----gg
i Alouatta_seniculus.k141_117119                         C 0 I 8
s Aotus_azarae.k141_3104676                                  15705 11 -     33861 a-a----------------agga---a-ag----gg
i Aotus_azarae.k141_3104676                              C 0 T 203
s Aotus_griseimembra.k141_2240599                            15741 11 -     34016 a-a----------------agga---a-ag----gg
i Aotus_griseimembra.k141_2240599                        C 0 T 219
s Aotus_nancymaae.KZ198451.1                               4298129 11 -   5030052 a-a----------------agga---a-ag----gg
i Aotus_nancymaae.KZ198451.1                             C 0 T 210
s Aotus_trivirgatus.k141_2152450                             15739 11 -     34685 a-a----------------agga---a-ag----gg
i Aotus_trivirgatus.k141_2152450                         C 0 T 215
s Aotus_vociferans.k141_344750                               28863 11 -     47192 a-a----------------agga---a-ag----gg
i Aotus_vociferans.k141_344750                           C 0 T 215
s Arctocebus_calabarensis.k141_2318572                       11569  1 +     14667 ----------------------------------G-
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Avahi_laniger.k141_765380                                  53778  8 -     92717 A-A----------------G------C-AA----GA
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54405  8 +     85213 A-A----------------G------C-AA----GA
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             5525 11 -     10423 a-g----------------agga---a-ag----gg
i Callibella_humilis.k141_1278103                        C 0 T 268
s Callimico_goeldii.k141_1091182                             24994 11 +     31915 a-a----------------agga---a-ag----gg
i Callimico_goeldii.k141_1091182                         C 0 T 266
s Callithrix_geoffroyi.k119_512088                            5225  9 +      5267 atg----------------g------g-ag----gg
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590679 11 - 189096842 a-g----------------agga---a-ag----gg
i Callithrix_jacchus.pat_scaffold_3                      C 0 T 242
s Callithrix_kuhlii.k119_1164682                             11970  9 -     12001 ATG----------------G------G-AG----GG
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1155  9 -     12242 A-A----------------A------ACAG----AA
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           156067 11 -    496798 a-a----------------g------g-gaggcag-
i Carlito_syrichta.NW_007259797.1                        I 31 I 15
s Castor_canadensis.CasCan_scaffold_2074                    137172  9 +    179628 A-A----------------A------ATAG----GA
i Castor_canadensis.CasCan_scaffold_2074                 I 2 C 0
s Cebuella_niveiventris.k141_1251222                         10160 11 -     11392 a-g----------------agga---a-ag----gg
i Cebuella_niveiventris.k141_1251222                     C 0 T 278
s Cebuella_pygmaea.k141_1309012                               6228 11 -      7577 a-g----------------agga---a-ag----gg
i Cebuella_pygmaea.k141_1309012                          C 0 T 248
s Cebus_albifrons.Contig27                                25652891 13 +  26074798 g-a----------------gggagg-g-ag----gg
i Cebus_albifrons.Contig27                               I 443 T 447
s Cebus_olivaceus.k141_1764483                                 835 11 +     28840 a-a----------------agga---a-ag----gg
i Cebus_olivaceus.k141_1764483                           C 0 T 418
s Cebus_unicolor.k141_1837183                                  560 11 +     14051 a-a----------------agga---a-ag----gg
i Cebus_unicolor.k141_1837183                            C 0 T 431
s Cephalopachus_bancanus.k141_1423433                         5565 11 +     31688 a-a----------------g------g-gaggcag-
i Cephalopachus_bancanus.k141_1423433                    I 114 T 117
s Cercocebus_atys.KQ010504.1                               4475761  8 +   4669795 a-a----------------a------a-ag----ac
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                         265  8 +     17872 a-a----------------a------a-ag----ac
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                            922  8 -     14043 a-a----------------a------a-ag----ac
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           8955  8 +     27781 a-a----------------a------a-ag----ac
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         9123  8 -     20310 a-a----------------a------a-ag----ac
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          12103  8 +     29689 a-a----------------a------a-ag----ac
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            6856  8 -     20078 a-a----------------a------a-ag----ac
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          14679  5 -     27936 --------------------------a-ag----ga
i Cercopithecus_hamlyni.k141_187466                      T 100 I 99
s Cercopithecus_lowei.k141_1854285                            3643  8 -     17152 a-a----------------a------a-ag----ac
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38817182  8 +  39242232 a-a----------------a------a-ag----ac
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222874  8 -  21565898 a-a----------------a------a-ag----ac
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       39992  8 -     53127 a-a----------------a------a-ag----ac
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                         243  8 +     13442 a-a----------------a------a-ag----ac
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14792  8 -     27947 a-a----------------a------a-ag----ac
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         14768  8 +     17596 a-a----------------a------a-ag----ac
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                           815  8 +     14005 a-a----------------a------a-ag----ac
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheirogaleus_major.k141_333249                             21158  8 -     52598 A-A----------------G------A-AA----GA
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16523  8 +     57038 a-a----------------g------a-aa----ga
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1252903  8 +   2543920 a-a----------------a------a-ag----ag
i Chinchilla_lanigera.JH722012.1                         I 2 C 0
s Chiropotes_albinasus.k141_2206961                            426 11 -     15524 a-a----------------agga---a-ag----ag
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18428752  8 -  18827391 g-a----------------a------a-ag----ac
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15189  8 -     50209 g-a----------------a------a-ag----ac
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422189  8 + 135778131 g-a----------------a------a-ag----ac
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1910595  8 +   2368649 a-g----------------g------a-ag----ga
i Colobus_angolensis.KN981557.1                          T 106 I 106
s Colobus_guereza.LG01                                   199948962  7 + 200372422 T-A----------------A------A-AG----A-
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37129  8 +     84244 a-g----------------g------a-ag----ga
i Colobus_polykomos.k141_906115                          T 102 I 106
s Ctenodactylus_gundi.CteGun_scaffold_65                    837177  8 +   1526836 A-G----------------A------A-AG----GA
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 2 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35862  9 +     51376 A-A----------------A------ACAG----GG
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 2 C 0
s Daubentonia_madagascariensis.ctg71                      12537374  8 -  12879189 A-A----------------C------A-AA----GA
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36497  8 +     67921 A-A----------------A------A-AG----GG
i Dinomys_branickii.DinBra_scaffold_21862                I 2 C 0
s Erythrocebus_patas.Contig38                             21205357  8 -  21539334 g-a----------------a------a-ag----ac
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13873  5 -     14127 --------------------------A-AA----GA
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6582  5 -     16928 --------------------------A-AA----GA
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15606  5 -     25546 --------------------------A-AA----GA
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12810  5 +     26330 --------------------------a-aa----ga
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14045  5 +     23973 --------------------------A-AA----GA
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12807  5 +     75513 --------------------------a-aa----ga
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10737  5 +     97555 --------------------------a-aa----ga
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              228  5 +     13026 --------------------------a-aa----ga
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4281  5 -     17153 --------------------------A-AA----GA
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13854  5 +    111500 --------------------------A-AA----GA
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Fukomys_damarensis.KN121974.1                             850531  8 +   3816255 a-g----------------g------a-ag----tg
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg2040                                     426706  7 -    453645 A-A----------------G------A-AA----A-
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4396  7 +     11339 a-a----------------g------a-aa----a-
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            1699  2 +     41679 -----------------------------A----G-
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1278  8 -      9135 g-g----------------g------a-ag----ga
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            31464  8 +     49224 A-G----------------G------A-GG----GA
i Glis_glis.GliGli_scaffold_19807                        I 2 I 2
s Gorilla_beringei.k141_3596273                              16160  9 -     32273 a-ag---------------a------a-ag----gg
i Gorilla_beringei.k141_3596273                          C 0 T 118
s Gorilla_gorilla.LT578341.1                             186338297  9 + 186649187 a-ag---------------a------a-ag----gg
i Gorilla_gorilla.LT578341.1                             C 0 T 117
s Graphiurus_murinus.GraMur_scaffold_10447                   32705  9 +     78134 A-G---------------AG------A-GG----AA
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 2
s Hapalemur_alaotrensis.k141_170648                           6918  5 -     19426 --------------------------A-AA----GA
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12067  5 -     15286 --------------------------A-AA----GA
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13706  5 +     18253 --------------------------a-aa----ga
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13807  5 -     41752 --------------------------A-AA----GA
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13644  5 -     16460 --------------------------A-AA----GA
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20662320  8 +  22651954 a-g----------------g------a-ag----tg
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hoolock_leuconedys.ctg274                                    434855  8 +    630532 a-g----------------g------a-ag----ga
i Hoolock_leuconedys.ctg274                                 T 110 I 4
s Hystrix_cristata.HysCri_scaffold_5660                      83209  8 +    135385 A-G----------------A------A-AG----TG
i Hystrix_cristata.HysCri_scaffold_5660                  I 2 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7520988  8 -   7955117 a-a----------------g------a-gg----ga
i Ictidomys_tridecemlineatus.JH393364.1                  I 2 I 7
s Indri_indri.k141_3655594                                   22599  8 +     31101 a-a----------------g------a-aa----ga
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15524159  5 -  30322482 --------------------------A-AA----TA
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7804 11 +     64341 a-a----------------agga---a-ag----gg
i Leontocebus_fuscicollis.k141_1820339                   C 0 T 285
s Leontocebus_illigeri.k141_1304848                            144 11 -     35062 a-a----------------agga---a-ag----gg
i Leontocebus_illigeri.k141_1304848                      C 0 I 38
s Leontocebus_nigricollis.k141_4610752                        7832 11 +     35603 a-a----------------agga---a-ag----gg
i Leontocebus_nigricollis.k141_4610752                   C 0 T 272
s Leontopithecus_chrysomelas.k141_1519602                    29248 11 +     38576 a-a----------------agga---a-ag----gg
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         25948 11 +     66356 a-c----------------agga---c-ag----gg
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         11050  8 -     23766 A-A----------------G------A-AA----GA
i Lepilemur_ankaranensis.k141_596936                     I 2 C 0
s Lepilemur_dorsalis.k141_577674                             29111  8 +     45836 A-A----------------G------A-AA----GA
i Lepilemur_dorsalis.k141_577674                         I 2 C 0
s Lepilemur_ruficaudatus.k141_121139                          1650  7 +     25010 --A----------------G------A-AA----GA
i Lepilemur_ruficaudatus.k141_121139                     I 1 C 0
s Lepilemur_septentrionalis.k141_185316                      27047  8 +     54090 A-A----------------G------A-AA----GA
i Lepilemur_septentrionalis.k141_185316                  I 2 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6543 24 -     14121 g-ggagagaggaaggaaggg------a-gg----ga
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437306  8 +   1826925 a-a----------------a------a-ag----ac
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5955  7 +     11245 A-A----------------G------A-AA----G-
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004775  7 +   6120653 A-A----------------G------A-AA----G-
i Loris_tardigradus.ctg83                                C 0 C 0
s Macaca_arctoides.k141_2326796                               7122  8 +     40492 a-a----------------a------a-ag----at
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59676381  8 +  60120075 a-a----------------a------a-ag----at
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 12897  8 -     26193 a-a----------------a------a-ag----at
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            80681  8 -    114318 a-a----------------a------a-ag----at
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  6368  8 -     23192 a-a----------------a------a-ag----at
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                15841  8 -     29190 a-a----------------a------a-ag----at
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  24406  8 +     37952 a-a----------------a------a-ag----at
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186839495  8 + 187317192 a-a----------------a------a-ag----at
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458058  8 -  25927173 a-a----------------a------a-ag----at
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  80254  8 +     89720 a-a----------------a------a-ag----at
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 7255  8 +     20474 a-a----------------a------a-ag----at
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   7055  8 -     14993 a-a----------------a------a-ag----at
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  329921  8 -    668171 a-a----------------a------a-ag----at
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 5368  8 -     24072 a-a----------------a------a-ag----at
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               25993  8 -     45290 a-a----------------a------a-ag----at
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23937581  8 -  24302211 a-a----------------a------a-ag----ac
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               351705  8 +    752769 a-a----------------a------a-ag----ac
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33103188  8 -  40650429 a-a----------------g------a-gg----ga
i Marmota_marmota.CZRN01000018.1                         I 2 I 7
s Mico_argentatus.k141_1239457                                6039 11 -      7380 a-g----------------agga---a-ag----gg
i Mico_argentatus.k141_1239457                           C 0 T 242
s Mico_humeralifer.k141_2457295                                268 11 +      1079 a-g----------------agga---a-ag----gg
i Mico_humeralifer.k141_2457295                          C 0 I 19
s Mico_schneideri.k141_1950671                                      6051 11 -      7356 a-g----------------agga---a-ag----gg
i Mico_schneideri.k141_1950671                                 C 0 T 242
s Microcebus_murinus.CM007674.1                           18291581  8 -  93316391 a-a----------------g------a-aa----ga
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9290  8 -     28506 a-a----------------a------A-ag----ac
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirza_zaza.k141_952172                                      9129  5 -     37649 --------------------------A-AA----GA
i Mirza_zaza.k141_952172                                 I 3 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              5053  3 +     14296 A-G----------------G----------------
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 2 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71341  9 -     80779 A-A----------------A------ATAG----GG
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 2 C 0
s Nasalis_larvatus.k141_413338                               15292  8 +     21681 g-a----------------a------a-ag----ac
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nycticebus_bengalensis.LG01                            102586319  7 - 196305487 A-A----------------G------A-AA----G-
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              243  7 +      2075 a-a----------------g------a-aa----g-
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761673  7 + 199412804 A-A----------------G------A-AA----G-
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1363619  8 +   3988456 a-a----------------g------a-gg----ga
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  746951  9 +  11899542 a-a----------------a------acag----gg
i Octodon_degus.JH651603.1                               I 2 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147422  8 + 174332312 g-g----------------g------a-gg----ga
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Pan_paniscus.KQ411613.1                                    44251  6 +     80009 ---g---------------a------a-ag----gg
i Pan_paniscus.KQ411613.1                                I 2 T 117
s Pan_troglodytes.CM009242.2                             189143151  9 + 189151597 a-ag---------------a------a-ag----gg
i Pan_troglodytes.CM009242.2                             C 0 I 14
s Papio_anubis.CM001495.2                                183443383  8 + 183742232 a-a----------------a------a-ag----ac
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7029  8 +     20448 a-a----------------a------a-ag----ac
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563841  8 +  20919399 a-a----------------a------a-ag----ac
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   5773  8 +     41871 a-a----------------a------a-ag----ac
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     9066  8 +     27711 a-a----------------a------a-ag----ac
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  9135  8 +      9205 a-a----------------a------a-ag----ac
i Papio_ursinus.k141_3428135                             C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10207  7 +     13100 A-A----------------G------A-AA----G-
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8613  7 +     25941 A-A----------------G------A-AA----G-
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28221  8 -     29689 A-G----------------G------T-AG----TC
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Piliocolobus_badius.k141_1234363                           43783  8 +     62158 g-a----------------a------a-ag----ac
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        38424  8 +     89929 a-g----------------g------a-ag----ga
i Piliocolobus_gordonorum.k141_381342                    T 106 I 106
s Piliocolobus_kirkii.k141_448987                            39840  8 +     51399 a-g----------------g------a-ag----ga
i Piliocolobus_kirkii.k141_448987                        T 106 I 106
s Piliocolobus_tephrosceles.PDMG02000141.1                14296078  8 -  14605196 a-g----------------g------a-ag----ga
i Piliocolobus_tephrosceles.PDMG02000141.1               T 106 I 106
s Pongo_abelii.CM009266.2                                189131287  8 + 189387572 a-a----------------a------a-ag----gg
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570894  8 +   9816681 a-a----------------a------a-ag----gg
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               73362  8 -     81375 a-g----------------g------a-ag----ga
i Presbytis_comata.k141_677006                           T 106 I 106
s Presbytis_mitrata.k141_1087752                              5182  8 +     19060 a-g----------------g------a-ag----ga
i Presbytis_mitrata.k141_1087752                         T 106 I 106
s Prolemur_simus.MPIZ01000396.1                            2596839  5 -   4620579 --------------------------a-aa----ga
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990822  8 +   2598838 a-a----------------g------a-aa----ga
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29134  8 +     38485 a-a----------------g------a-aa----ga
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1177  8 -     13098 A-A----------------G------A-AA----GA
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26655  8 +     35766 a-a----------------g------a-aa----ga
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4842  8 -     24134 A-A----------------G------A-AA----GA
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28667  8 -     67325 A-A----------------G------A-AA----GA
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4890  8 -      6182 A-A----------------G------A-AA----GA
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15191  8 -     91421 a-g----------------g------a-ag----ga
i Pygathrix_cinerea.k141_1153803                         T 110 I 110
s Pygathrix_nigripes_b.ctg100                                 7609311  8 +   7812017 a-g----------------g------a-ag----ga
i Pygathrix_nigripes_b.ctg100                               T 110 I 110
s Pygathrix_nigripes_a.k141_215492                             15163  8 -     72585 a-g----------------g------a-ag----ga
i Pygathrix_nigripes_a.k141_215492                         T 110 I 110
s Rhinopithecus_bieti.k119_217274                             6877  8 -     11128 a-g----------------g------a-ag----ga
i Rhinopithecus_bieti.k119_217274                        T 107 I 107
s Rhinopithecus_roxellana.NC_044550.1                     91236230  8 - 195417433 a-g----------------g------a-ag----ga
i Rhinopithecus_roxellana.NC_044550.1                    T 103 I 103
s Rhinopithecus_strykeri.ctg102                            7671882  8 +   7961872 a-g----------------g------a-ag----ga
i Rhinopithecus_strykeri.ctg102                          T 107 I 107
s Saguinus_bicolor.k141_8081                                   420 11 +     42994 a-a----------------agga---a-ag----ag
i Saguinus_bicolor.k141_8081                             C 0 I 14
s Saguinus_imperator.k141_57697                                205 11 +      1030 a-a----------------agga---a-ag----gg
i Saguinus_imperator.k141_57697                          C 0 I 14
s Saguinus_inustus.k141_3945547                                280 11 -      8737 a-a----------------agga---a-ag----gg
i Saguinus_inustus.k141_3945547                          I 2 I 42
s Saguinus_labiatus.k141_285685                               8444  9 +      8564 atg----------------g------g-ag----gg
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469771 11 + 209938924 a-a----------------agga---a-ag----ag
i Saguinus_midas.LG03                                    C 0 T 479
s Saguinus_mystax.k141_374627                                 8406 11 -      9399 a-a----------------agga---a-ag----gg
i Saguinus_mystax.k141_374627                            C 0 T 408
s Saimiri_boliviensis.NW_024100920.1                     119951148 11 - 121099817 a-a----------------agga---a-ag----gg
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23487 11 +     46362 a-a----------------agga---a-ag----gg
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               23582 11 +     45824 a-a----------------agga---a-ag----gg
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             40261 11 -     64574 a-a----------------agga---a-ag----gg
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               3333 11 -     23631 a-a----------------agga---a-ag----gg
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 23478 11 -     61129 a-a----------------agga---a-ag----gg
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420680  9 -   5703754 atg----------------g------g-ag----ga
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          56089 11 -     80660 a-a----------------agga---a-ag----gg
i Sapajus_macrocephalus.k141_351809                      C 0 T 370
s Semnopithecus_entellus.k141_11662                          19700  8 -     19888 A-G----------------G------A-CG----GA
i Semnopithecus_entellus.k141_11662                      I 9 I 14
s Semnopithecus_hypoleucos.k141_1615806                      26905  8 +     39453 a-g----------------g------a-ag----ga
i Semnopithecus_hypoleucos.k141_1615806                  T 110 I 110
s Semnopithecus_johnii.k141_670120                            7424  8 +     27826 a-g----------------g------a-ag----ga
i Semnopithecus_johnii.k141_670120                       T 109 I 109
s Semnopithecus_priam.k141_638794                             6945  8 -     19483 a-g----------------g------a-ag----ga
i Semnopithecus_priam.k141_638794                        T 110 I 110
s Semnopithecus_schistaceus.k141_1584426                      7011  8 +      7198 a-g----------------g------a-ag----ga
i Semnopithecus_schistaceus.k141_1584426                 I 10 I 14
s Semnopithecus_vetulus.k141_1200928                         15271  8 +     15514 a-g----------------g------a-ag----ga
i Semnopithecus_vetulus.k141_1200928                     I 10 I 14
s Spermophilus_dauricus.KZ294078.1                         1954043  8 -   3870691 a-a----------------g------a-gg----ga
i Spermophilus_dauricus.KZ294078.1                       I 2 I 7
s Tarsius_lariang.k141_2201908                               26558 11 +     70052 a-a----------------g------g-gaggcag-
i Tarsius_lariang.k141_2201908                           I 105 T 108
s Tarsius_wallacei.k141_254427                                1355 11 -     16117 a-a----------------g------g-gaggcag-
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428701  8 + 186847797 a-a----------------a------a-ag----ac
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105542  8 +    114563 A-G----------------G------T-GG----TA
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Trachypithecus_auratus.k141_722599                         10996  8 -     20410 a-g----------------g------a-ag----ga
i Trachypithecus_auratus.k141_722599                     T 110 I 110
s Trachypithecus_crepusculus.k141_582567                       110  8 -     12674 a-g----------------g------a-ag----ga
i Trachypithecus_crepusculus.k141_582567                 T 110 I 110
s Trachypithecus_cristatus.k141_580354                       11097  8 +     19930 a-g----------------g------a-ag----ga
i Trachypithecus_cristatus.k141_580354                   T 110 I 110
s Trachypithecus_francoisi.k141_1412647                       7618  8 -     19997 g-a----------------a------a-ag----ac
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            47648  8 -     60166 a-g----------------g------a-ag----ga
i Trachypithecus_geei.k141_277701                        T 109 I 109
s Trachypithecus_germaini.k141_912491                        15119  8 -     27529 a-g----------------g------a-ag----ga
i Trachypithecus_germaini.k141_912491                    T 110 I 110
s Trachypithecus_hatinhensis.k141_143409                     15063  8 -     18194 a-g----------------g------a-ag----ga
i Trachypithecus_hatinhensis.k141_143409                 T 110 I 110
s Trachypithecus_laotum.k141_907409                           8885  8 -     21137 g-a----------------a------a-ag----ac
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    7588  8 -     10723 g-a----------------a------a-ag----ac
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         6650  8 +      9834 a-g----------------g------a-ag----ga
i Trachypithecus_melamera.k141_434728                    T 110 I 110
s Trachypithecus_obscurus.k141_190785                        24963  8 +     32220 a-g----------------g------a-ag----ga
i Trachypithecus_obscurus.k141_190785                    T 110 I 110
s Trachypithecus_phayrei.ctg124                            5939065  8 +   6242583 a-g----------------g------a-ag----ga
i Trachypithecus_phayrei.ctg124                          T 110 I 110
s Trachypithecus_pileatus.k141_2007326                        8317  8 +     20839 a-g----------------g------a-ag----ga
i Trachypithecus_pileatus.k141_2007326                   T 109 I 109
s Varecia_rubra.k141_590885                                  11500  8 +     50397 A-A----------------G------A-AG----AA
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11559  8 +     24756 A-A----------------G------A-AG----AA
i Varecia_variegata.k141_1128296                         C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          1173  6 +    224448 -------------------g------a-gg----ga
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 7
e Echinops_telfairi.JH980293.1                            48780689  3 + 111700974 I
e Otolemur_garnettii.GL873799.1                             696396  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         4233  0 +      8798 C
e Mus_pahari.LT608297.1                                   31355110  4 -  89631738 I
e Mus_spretus.CM004101.1                                  90752512  4 - 130317789 I
e Mus_musculus.chr8                                       87650451  4 - 129401213 I
e Mus_caroli.LT608237.1                                   84361453  4 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      14994  0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5478  0 +     86975 C
e Vulpes_lagopus.VulLag_flattened_line_30954                 10902  0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5371995  0 -   5488506 C
e Ursus_maritimus.KK499267.1                               4850549  0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   53362 63 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     9322 21 -     10553 I
e Tupaia_chinensis.KB320699.1                              2155905 215 +   4065304 T
e Trichechus_manatus.JH594705.1                            4293354  3 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     81307  0 +    610378 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   6516  8 +      8208 I
e Tapirus_terrestris.TapTer_scaffold_755                    387334  0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      118877  0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 72732  9 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                10910  0 +     41958 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6810879  0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629              18437  0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             30850  6 +     97271 I
e Sorex_araneus.JH798187.1                                13651056 93 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               3814 63 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_42075                      411  4 -     30804 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    153257 71 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                87918  0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570713  4 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20274421  0 -  38429054 C
e Pteropus_vampyrus.KN534172.1                                6949  0 -      8028 C
e Pteropus_alecto.KB030862.1                              22976896  0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         40349  0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            15188  0 -     21811 C
e Psammomys_obesus.NESX01036370.1                            10483  4 -     21651 I
e Procavia_capensis.ProCapCap_scaffold_85530                 13455  3 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             1869  0 +     22620 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Peromyscus_maniculatus.KI615324.1                       18194865  4 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12764  0 -     78924 C
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Panthera_tigris.KE722367.1                               4721355  0 -   8748460 C
e Panthera_pardus.KV860321.1                                264476  0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  151267  0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       462454  0 -    559221 C
e Orycteropus_afer.OryAfe_flattened_line_144387               9955  3 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80239  4 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   25239  4 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              506765  0 -   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9149506  0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20307615  0 +  31847680 C
e Nannospalax_galili.KL204047.1                            2034163  2 -   3037898 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189371  9 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_281845                          77  0 +      1835 C
e Myotis_lucifugus.GL429869.1                              3903925  0 -   4330536 C
e Myotis_davidii.KB100139.1                                1587833  0 -   6019432 C
e Myotis_brandtii.KE162005.1                                280571  0 -  10118263 C
e Mustela_putorius.JH418006.1                               301572  0 -  14710649 C
e Murina_feae.MurFea_scaffold_85699                           6928  0 +     14753 C
e Mungos_mungo.MunMun_flattened_line_23663                   35534  0 +     37127 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 141733  0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         6029  0 -      8324 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             34405  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1850724  0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11260571  4 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                15766  0 -     19307 C
e Microgale_talazaci.MicTal_scaffold_6613                    22438  3 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182333  4 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 32827 16 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365             10159  0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                        10441  0 -    207569 C
e Manis_pentadactyla.KN006162.1                              50597  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18608  0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 90730  0 +     94391 C
e Lycaon_pictus.CM007581.1                                17955227 211 -  59628241 I
e Loxodonta_africana.GL010049.1                            4217432  4 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Leptonychotes_weddellii.KB714746.1                       3043161  0 +   3914936 C
e Lasiurus_borealis.LasBor_scaffold_32767                    16479  0 -     42476 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276898  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  45128  0 +     55795 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                1000  3 +      7595 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               242434  0 +    327341 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Felis_nigripes.FelNig_flattened_line_20823                  9652  0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20195908  0 + 205367284 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3328282 71 -   7059049 I
e Equus_przewalskii.KK951119.1                               33512  0 +    498745 C
e Equus_caballus.CM000403.2                               18531483  0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1283663  0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2145831  0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16329422  0 -  41312741 C
e Ellobius_talpinus.LOJH01081419.1                             523  4 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          20392  4 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1097777  3 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Eidolon_helvum.KE759718.1                                  10637  0 +     11740 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    6161  0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  673409  0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8630234  0 +  20541912 C
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            63648  8 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             28601  0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_37019               3028 88 -     19598 I
e Cricetulus_griseus.LT883664.1                           11667658  4 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 50291  2 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          14520  0 -     20389 C
e Condylura_cristata.JH655891.1                           17548142 67 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            173497  9 +    839153 I
e Choloepus_didactylus.ChoDid_scaffold_45914                 18421  8 +     19366 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870             641  8 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2585  0 -     25243 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     93132  0 +    217609 C
e Carollia_perspicillata.CarPer_scaffold_92756                5222  0 -     11696 C
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18500499  0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17958987  0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9034722  0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    185336  0 -    185531 C
e CanFam4.chr16                                           17799210 78 -  60362399 I
e Camelus_ferus.KB017975.1                                  403236  1 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2334953  0 -   7040546 C
e Camelus_bactrianus.KN276810.1                           10002495  0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  4868  0 +     43469 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      12706  8 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      185460  0 +    412891 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74597  0 -     89534 C
e Ailurus_fulgens.LNAC01001112.1                             79464  0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9510688  0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     70877 18 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           827414  0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6796 4 +     62944 agga
s Gorilla_beringei.k141_3596273                              16051 4 -     32273 agga
i Gorilla_beringei.k141_3596273                          T 118 I 114
s Gorilla_gorilla.LT578341.1                             186338189 4 + 186649187 agga
i Gorilla_gorilla.LT578341.1                             T 117 I 113
s Pan_paniscus.KQ411613.1                                    44140 4 +     80009 agga
i Pan_paniscus.KQ411613.1                                T 117 I 113
s Pan_troglodytes.KZ622849.1                                 22342 4 +    110857 agga
i Pan_troglodytes.KZ622849.1                             T 46 I 14
e Echinops_telfairi.JH980293.1                            48780689 3 + 111700974 I
e Otolemur_garnettii.GL873799.1                             696396 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         4233 0 +      8798 C
e Galago_senegalensis.k141_631886                             4403 0 +     11339 C
e Galago_moholi.ctg2040                                     426713 0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          56100 370 -     80660 T
e Sapajus_apella.ctg103                                    5420689 0 -   5703754 C
e Saimiri_ustus.k141_1484609                                 23489 0 -     61129 C
e Saimiri_sciureus.k141_2278166                               3344 0 -     23631 C
e Saimiri_oerstedii.k141_1487881                             40272 0 -     64574 C
e Saimiri_macrodon.k141_716185                               23593 0 +     45824 C
e Saimiri_cassiquiarensis.k141_2188234                       23498 0 +     46362 C
e Saimiri_boliviensis.NW_024100920.1                     119951159 0 - 121099817 C
e Saguinus_mystax.k141_374627                                 8417 408 -      9399 T
e Saguinus_midas.LG03                                    209469782 479 + 209938924 T
e Saguinus_labiatus.k141_285685                               8453 0 +      8564 C
e Saguinus_inustus.k141_3945547                                291 42 -      8737 I
e Saguinus_imperator.k141_57697                                216 14 +      1030 I
e Saguinus_bicolor.k141_8081                                   431 14 +     42994 I
e Mico_schneideri.k141_1950671                                      6062 242 -      7356 T
e Mico_humeralifer.k141_2457295                                279 19 +      1079 I
e Mico_argentatus.k141_1239457                                6050 242 -      7380 T
e Leontopithecus_rosalia.k141_464620                         25959 0 +     66356 C
e Leontopithecus_chrysomelas.k141_1519602                    29259 0 +     38576 C
e Leontocebus_nigricollis.k141_4610752                        7843 272 +     35603 T
e Leontocebus_illigeri.k141_1304848                            155 38 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        7815 285 +     64341 T
e Chiropotes_albinasus.k141_2206961                            437 0 -     15524 C
e Cebus_unicolor.k141_1837183                                  571 431 +     14051 T
e Cebus_olivaceus.k141_1764483                                 846 418 +     28840 T
e Cebus_albifrons.Contig27                                25652904 447 +  26074798 T
e Cebuella_pygmaea.k141_1309012                               6239 248 -      7577 T
e Cebuella_niveiventris.k141_1251222                         10171 278 -     11392 T
e Callithrix_kuhlii.k119_1164682                             11979 0 -     12001 C
e Callithrix_jacchus.pat_scaffold_3                       23590690 242 - 189096842 T
e Callithrix_geoffroyi.k119_512088                            5234 0 +      5267 C
e Callimico_goeldii.k141_1091182                             25005 266 +     31915 T
e Callibella_humilis.k141_1278103                             5536 268 -     10423 T
e Aotus_vociferans.k141_344750                               28874 215 -     47192 T
e Aotus_trivirgatus.k141_2152450                             15750 215 -     34685 T
e Aotus_nancymaae.KZ198451.1                               4298140 210 -   5030052 T
e Aotus_griseimembra.k141_2240599                            15752 219 -     34016 T
e Aotus_azarae.k141_3104676                                  15716 203 -     33861 T
e Alouatta_seniculus.k141_117119                             14929 8 +     50774 I
e Alouatta_puruensis.k141_362188                               477 201 +      5663 T
e Alouatta_palliata.k141_2135620                              3765 194 +     47717 T
e Alouatta_nigerrima.k141_3472759                            18381 197 -     18578 T
e Alouatta_macconnelli.k141_918386                             795 197 -      9457 T
e Alouatta_juara.k141_1509701                                25074 197 +     25266 T
e Alouatta_discolor.k141_566626                              11247 8 +     28687 I
e Alouatta_caraya.k141_1701091                                 798 194 -     36483 T
e Alouatta_belzebul.k141_3560514                              7689 199 +     51355 T
e Mus_pahari.LT608297.1                                   31355110 4 -  89631738 I
e Mus_spretus.CM004101.1                                  90752512 4 - 130317789 I
e Mus_musculus.chr8                                       87650451 4 - 129401213 I
e Mus_caroli.LT608237.1                                   84361453 4 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Loris_tardigradus.ctg83                                  1004782 0 +   6120653 C
e Loris_lydekkerianus.k141_2539221                            5962 0 +     11245 C
e Perodicticus_potto.k141_1092580                             8620 0 +     25941 C
e Perodicticus_ibeanus.k141_855320                           10214 0 +     13100 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      14994 0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5478 0 +     86975 C
e Xerus_inauris.XerIna_scaffold_2302                          1179 7 +    224448 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 10902 0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5371995 0 -   5488506 C
e Varecia_variegata.k141_1128296                             11567 0 +     24756 C
e Varecia_rubra.k141_590885                                  11508 0 +     50397 C
e Ursus_maritimus.KK499267.1                               4850549 0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   53362 63 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     9322 21 -     10553 I
e Tupaia_chinensis.KB320699.1                              2155905 215 +   4065304 T
e Trichechus_manatus.JH594705.1                            4293354 3 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Trachypithecus_pileatus.k141_2007326                        8325 109 +     20839 I
e Trachypithecus_phayrei.ctg124                            5939073 110 +   6242583 I
e Trachypithecus_obscurus.k141_190785                        24971 110 +     32220 I
e Trachypithecus_melamera.k141_434728                         6658 110 +      9834 I
e Trachypithecus_leucocephalus.k141_587342                    7596 0 -     10723 C
e Trachypithecus_laotum.k141_907409                           8893 0 -     21137 C
e Trachypithecus_hatinhensis.k141_143409                     15071 110 -     18194 I
e Trachypithecus_germaini.k141_912491                        15127 110 -     27529 I
e Trachypithecus_geei.k141_277701                            47656 109 -     60166 I
e Trachypithecus_francoisi.k141_1412647                       7626 0 -     19997 C
e Trachypithecus_cristatus.k141_580354                       11105 110 +     19930 I
e Trachypithecus_crepusculus.k141_582567                       118 110 -     12674 I
e Trachypithecus_auratus.k141_722599                         11004 110 -     20410 I
e Tonatia_saurophila.TonSau_scaffold_294                     81307 0 +    610378 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   6516 8 +      8208 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              105550 0 +    114563 C
e Theropithecus_gelada.CM009954.1                        186428709 0 + 186847797 C
e Tarsius_wallacei.k141_254427                                1366 0 -     16117 C
e Tarsius_lariang.k141_2201908                               26569 108 +     70052 T
e Tapirus_terrestris.TapTer_scaffold_755                    387334 0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      118877 0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 72732 9 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                10910 0 +     41958 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6810879 0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629              18437 0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             30850 6 +     97271 I
e Spermophilus_dauricus.KZ294078.1                         1954051 7 -   3870691 I
e Sorex_araneus.JH798187.1                                13651056 93 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               3814 63 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_42075                      411 4 -     30804 I
e Semnopithecus_vetulus.k141_1200928                         15279 14 +     15514 I
e Semnopithecus_schistaceus.k141_1584426                      7019 14 +      7198 I
e Semnopithecus_priam.k141_638794                             6953 110 -     19483 I
e Semnopithecus_johnii.k141_670120                            7432 109 +     27826 I
e Semnopithecus_hypoleucos.k141_1615806                      26913 110 +     39453 I
e Semnopithecus_entellus.k141_11662                          19708 14 -     19888 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    153257 71 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                87918 0 -     96226 C
e Rhinopithecus_strykeri.ctg102                            7671890 107 +   7961872 I
e Rhinopithecus_roxellana.NC_044550.1                     91236238 103 - 195417433 I
e Rhinopithecus_bieti.k119_217274                             6885 107 -     11128 I
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570713 4 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Pygathrix_nigripes_a.k141_215492                             15171 110 -     72585 I
e Pygathrix_nigripes_b.ctg100                                 7609319 110 +   7812017 I
e Pygathrix_cinerea.k141_1153803                             15199 110 -     91421 I
e Puma_concolor.QAVW01001104.1                            20274421 0 -  38429054 C
e Pteropus_vampyrus.KN534172.1                                6949 0 -      8028 C
e Pteropus_alecto.KB030862.1                              22976896 0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         40349 0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            15188 0 -     21811 C
e Psammomys_obesus.NESX01036370.1                            10483 4 -     21651 I
e Propithecus_verreauxi.k141_956661                           4898 0 -      6182 C
e Propithecus_tattersalli.k141_790011                        28675 0 -     67325 C
e Propithecus_perrieri.k141_1200571                           4850 0 -     24134 C
e Propithecus_edwardsi.k141_1176054                          26663 0 +     35766 C
e Propithecus_diadema.k141_58108                              1185 0 -     13098 C
e Propithecus_coronatus.k141_347390                          29142 0 +     38485 C
e Propithecus_coquerelli.NW_012148875.1                     990830 0 +   2598838 C
e Prolemur_simus.MPIZ01000396.1                            2596844 0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                 13455 3 -     22811 I
e Presbytis_mitrata.k141_1087752                              5190 106 +     19060 I
e Presbytis_comata.k141_677006                               73370 106 -     81375 I
e Pongo_pygmaeus.ctg66                                     9570902 0 +   9816681 C
e Pongo_abelii.CM009266.2                                189131295 0 + 189387572 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             1869 0 +     22620 C
e Piliocolobus_tephrosceles.PDMG02000141.1                14296086 106 -  14605196 I
e Piliocolobus_kirkii.k141_448987                            39848 106 +     51399 I
e Piliocolobus_gordonorum.k141_381342                        38432 106 +     89929 I
e Piliocolobus_badius.k141_1234363                           43791 0 +     62158 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     28229 0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18194865 4 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12764 0 -     78924 C
e Papio_ursinus.k141_3428135                                  9143 0 +      9205 C
e Papio_papio.k141_802527                                     9074 0 +     27711 C
e Papio_kindae.k141_1936966                                   5781 0 +     41871 C
e Papio_hamadryas.Contig39                                20563849 0 +  20919399 C
e Papio_cynocephalus.k141_4307930                             7037 0 +     20448 C
e Papio_anubis.CM001495.2                                183443391 0 + 183742232 C
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4721355 0 -   8748460 C
e Panthera_pardus.KV860321.1                                264476 0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  151267 0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       462454 0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                        67147430 0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               9955 3 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80239 4 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   25239 4 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              506765 0 -   2017862 C
e Octodon_degus.JH651603.1                                  746960 0 +  11899542 C
e Ochotona_princeps.JH802162.1                             1363627 0 +   3988456 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761680 0 + 199412804 C
e Nycticebus_coucang.k141_1127096                              250 0 +      2075 C
e Nycticebus_bengalensis.LG01                            102586326 0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9149506 0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20307615 0 +  31847680 C
e Nasalis_larvatus.k141_413338                               15300 0 +     21681 C
e Nannospalax_galili.KL204047.1                            2034163 2 -   3037898 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189371 9 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_281845                          77 0 +      1835 C
e Myotis_lucifugus.GL429869.1                              3903925 0 -   4330536 C
e Myotis_davidii.KB100139.1                                1587833 0 -   6019432 C
e Myotis_brandtii.KE162005.1                                280571 0 -  10118263 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     71350 0 -     80779 C
e Mustela_putorius.JH418006.1                               301572 0 -  14710649 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              5056 0 +     14296 C
e Murina_feae.MurFea_scaffold_85699                           6928 0 +     14753 C
e Mungos_mungo.MunMun_flattened_line_23663                   35534 0 +     37127 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 141733 0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Mirza_zaza.k141_952172                                      9134 0 -     37649 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         6029 0 -      8324 C
e Miopithecus_ogouensis.k141_534055                           9298 0 -     28506 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             34405 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1850724 0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11260571 4 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                15766 0 -     19307 C
e Microgale_talazaci.MicTal_scaffold_6613                    22438 3 -    145209 I
e Microcebus_murinus.CM007674.1                           18291589 0 -  93316391 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182333 4 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 32827 16 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365             10159 0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                        10441 0 -    207569 C
e Marmota_marmota.CZRN01000018.1                          33103196 7 -  40650429 I
e Manis_pentadactyla.KN006162.1                              50597 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18608 0 +    737560 C
e Mandrillus_sphinx.Contig270                               351713 0 +    752769 C
e Mandrillus_leucophaeus.scaffold280                      23937589 0 -  24302211 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 90730 0 +     94391 C
e Macaca_tonkeana.k141_1498238                               26001 0 -     45290 C
e Macaca_thibetana.k99_256239                                 5376 0 -     24072 C
e Macaca_silenus.Contig273                                  329929 0 -    668171 C
e Macaca_siberu.k141_635500                                   7063 0 -     14993 C
e Macaca_radiata.k141_3680011                                 7263 0 +     20474 C
e Macaca_nigra.k141_1655396                                  80262 0 +     89720 C
e Macaca_nemestrina.KQ007038.1                            25458066 0 -  25927173 C
e Macaca_mulatta.NC_041758.1                             186839503 0 + 187317192 C
e Macaca_maura.k141_2733130                                  24414 0 +     37952 C
e Macaca_leonina.k141_3550399                                15849 0 -     29190 C
e Macaca_fuscata.k119_255327                                  6376 0 -     23192 C
e Macaca_fascicularis.k141_814140                            80689 0 -    114318 C
e Macaca_cyclopis.k119_18836                                 12905 0 -     26193 C
e Macaca_assamensis.Contig5                               59676389 0 +  60120075 C
e Macaca_arctoides.k141_2326796                               7130 0 +     40492 C
e Lycaon_pictus.CM007581.1                                17955227 211 -  59628241 I
e Loxodonta_africana.GL010049.1                            4217432 4 -  43346337 I
e Lophocebus_aterrimus.ctg367                              1437314 0 +   1826925 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     6567 0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3043161 0 +   3914936 C
e Lepilemur_septentrionalis.k141_185316                      27055 0 +     54090 C
e Lepilemur_ruficaudatus.k141_121139                          1657 0 +     25010 C
e Lepilemur_dorsalis.k141_577674                             29119 0 +     45836 C
e Lepilemur_ankaranensis.k141_596936                         11058 0 -     23766 C
e Lemur_catta.scaffold_24                                 15524164 0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    16479 0 -     42476 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276898 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Indri_indri.k141_3655594                                   22607 0 +     31101 C
e Ictidomys_tridecemlineatus.JH393364.1                    7520996 7 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      83217 0 +    135385 C
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  45128 0 +     55795 C
e Hoolock_leuconedys.ctg274                                    434863 4 +    630532 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                1000 3 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20662328 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               242434 0 +    327341 C
e Hapalemur_occidentalis.k141_907772                         13649 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                         13812 0 -     41752 C
e Hapalemur_griseus.k141_1511508                             13711 0 +     18253 C
e Hapalemur_gilberti.k141_488810                             12072 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           6923 0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32714 2 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31472 2 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Galeopterus_variegatus.GalVar_scaffold_108840               1286 0 -      9135 C
e Galagoides_demidoff.k141_1711393                            1701 0 +     41679 C
e Fukomys_damarensis.KN121974.1                             850539 0 +   3816255 C
e Felis_nigripes.FelNig_flattened_line_20823                  9652 0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20195908 0 + 205367284 C
e Eulemur_sanfordi.k141_1122526                              13859 0 +    111500 C
e Eulemur_rufus.k141_1476633                                  4286 0 -     17153 C
e Eulemur_rubriventer.k141_774594                              233 0 +     13026 C
e Eulemur_mongoz.k141_232305                                 10742 0 +     97555 C
e Eulemur_macaco.k141_1562045                                12812 0 +     75513 C
e Eulemur_fulvus.k141_544389                                 14050 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                            12815 0 +     26330 C
e Eulemur_coronatus.k141_885031                              15611 0 -     25546 C
e Eulemur_collaris.k141_377015                                6587 0 -     16928 C
e Eulemur_albifrons.k141_342033                              13878 0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erythrocebus_patas.Contig38                             21205365 0 -  21539334 C
e Erinaceus_europaeus.JH835339.1                           3328282 71 -   7059049 I
e Equus_przewalskii.KK951119.1                               33512 0 +    498745 C
e Equus_caballus.CM000403.2                               18531483 0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1283663 0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2145831 0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16329422 0 -  41312741 C
e Ellobius_talpinus.LOJH01081419.1                             523 4 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          20392 4 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1097777 3 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Eidolon_helvum.KE759718.1                                  10637 0 +     11740 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    36505 0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    6161 0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  673409 0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8630234 0 +  20541912 C
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Daubentonia_madagascariensis.ctg71                      12537382 0 -  12879189 C
e Dasypus_novemcinctus.JH564415.1                            63648 8 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35871 0 +     51376 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    837185 0 +   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129             28601 0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_37019               3028 88 -     19598 I
e Cricetulus_griseus.LT883664.1                           11667658 4 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 50291 2 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          14520 0 -     20389 C
e Condylura_cristata.JH655891.1                           17548142 67 -  53390261 I
e Colobus_polykomos.k141_906115                              37137 106 +     84244 I
e Colobus_guereza.LG01                                   199948969 0 + 200372422 C
e Colobus_angolensis.KN981557.1                            1910603 106 +   2368649 I
e Choloepus_hoffmanni.KN194906.1                            173497 9 +    839153 I
e Choloepus_didactylus.ChoDid_scaffold_45914                 18421 8 +     19366 I
e Chlorocebus_sabaeus.CM001947.1                         135422197 0 + 135778131 C
e Chlorocebus_pygerythrus.k141_1025673                       15197 0 -     50209 C
e Chlorocebus_aethiops.ctg25                              18428760 0 -  18827391 C
e Chinchilla_lanigera.JH722012.1                           1252911 0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           16531 0 +     57038 C
e Cheirogaleus_major.k141_333249                             21166 0 -     52598 C
e Chaetophractus_vellerosus.ChaVel_scaffold_138870             641 8 -      8501 I
e Cercopithecus_roloway.k141_2581234                           823 0 +     14005 C
e Cercopithecus_pogonias.k141_822820                         14776 0 +     17596 C
e Cercopithecus_petaurista.k141_807961                       14800 0 -     27947 C
e Cercopithecus_nictitans.k141_1119862                         251 0 +     13442 C
e Cercopithecus_neglectus.k141_2526306                       40000 0 -     53127 C
e Cercopithecus_mona.ctg39                                21222882 0 -  21565898 C
e Cercopithecus_albogularis.ctg5                                38817190 0 +  39242232 C
e Cercopithecus_lowei.k141_1854285                            3651 0 -     17152 C
e Cercopithecus_hamlyni.k141_187466                          14684 99 -     27936 I
e Cercopithecus_diana.k141_1150327                            6864 0 -     20078 C
e Cercopithecus_cephus.k141_1078548                          12111 0 +     29689 C
e Cercopithecus_ascanius.k141_1024104                         9131 0 -     20310 C
e Cercocebus_torquatus.k141_3057011                           8963 0 +     27781 C
e Cercocebus_lunulatus.k141_3342297                            930 0 -     14043 C
e Cercocebus_chrysogaster.k141_1540778                         273 0 +     17872 C
e Cercocebus_atys.KQ010504.1                               4475769 0 +   4669795 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2585 0 -     25243 C
e Cephalopachus_bancanus.k141_1423433                         5576 117 +     31688 T
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     93132 0 +    217609 C
e Castor_canadensis.CasCan_scaffold_2074                    137181 0 +    179628 C
e Carollia_perspicillata.CarPer_scaffold_92756                5222 0 -     11696 C
e Carlito_syrichta.NW_007259797.1                           156078 15 -    496798 I
e Capromys_pilorides.CapPil_scaffold_65020                    1164 0 -     12242 C
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18500499 0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17958987 0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9034722 0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    185336 0 -    185531 C
e CanFam4.chr16                                           17799210 78 -  60362399 I
e Camelus_ferus.KB017975.1                                  403236 1 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2334953 0 -   7040546 C
e Camelus_bactrianus.KN276810.1                           10002495 0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              54413 0 +     85213 C
e Avahi_laniger.k141_765380                                  53786 0 -     92717 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  4868 0 +     43469 C
e Arctocebus_calabarensis.k141_2318572                       11570 0 +     14667 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      12706 8 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      185460 0 +    412891 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Allochrocebus_solatus.k141_166128                           6108 0 -     12518 C
e Allochrocebus_preussi.k141_1442296                          5256 0 -     18505 C
e Allochrocebus_lhoesti.k141_4309873                         14758 0 -     28001 C
e Allenopithecus_nigroviridis.k141_3361533                   14844 123 -     52922 T
e Allactaga_bullata.AllBul_scaffold_9566                     74597 0 -     89534 C
e Ailurus_fulgens.LNAC01001112.1                             79464 0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9510688 0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     70877 18 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           827414 0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6800 14 +     62944 ag--------g---------aa----t--------------------c------------aag------------ga--------ag
s Acinonyx_jubatus.LLWD01001279.1                           827414  2 -   1699592 ----------------------------------------------------------------------------g--------a-
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 7
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510688  2 -  29979442 ----------------------------------------------------------------------------g--------a-
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 7
s Ailurus_fulgens.LNAC01001112.1                             79464  2 -    347723 ----------------------------------------------------------------------------g--------a-
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 7
s Allactaga_bullata.AllBul_scaffold_9566                     74597  6 -     89534 AG--------A---------GA----G------------------------------------------------------------
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14721 34 -     52922 ag--------g---------aa----acaagggaggaaggaaggatac------------aag------------ga--------ag
i Allenopithecus_nigroviridis.k141_3361533               T 123 I 103
s Allochrocebus_lhoesti.k141_4309873                         14758 14 -     28001 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          5256 14 -     18505 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           6108 14 -     12518 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              7490 14 +     51355 ag--------g---------aa----g--------------------g------------gag------------gg--------ag
i Alouatta_belzebul.k141_3560514                         T 199 I 207
s Alouatta_caraya.k141_1701091                                 604 14 -     36483 ag--------g---------ga----g--------------------g------------gag------------gg--------ag
i Alouatta_caraya.k141_1701091                           T 194 I 202
s Alouatta_discolor.k141_566626                              11255 14 +     28687 ag--------g---------ga----a--------------------g------------cag------------ga--------ag
i Alouatta_discolor.k141_566626                          I 8 C 0
s Alouatta_juara.k141_1509701                                24877 14 +     25266 ag--------g---------ga----a--------------------g------------gag------------gg--------ag
i Alouatta_juara.k141_1509701                            T 197 I 205
s Alouatta_macconnelli.k141_918386                             598 14 -      9457 ag--------g---------ga----a--------------------g------------gag------------gg--------ag
i Alouatta_macconnelli.k141_918386                       T 197 I 205
s Alouatta_nigerrima.k141_3472759                            18184 14 -     18578 ag--------g---------ga----a--------------------g------------gag------------gg--------ag
i Alouatta_nigerrima.k141_3472759                        T 197 I 205
s Alouatta_palliata.k141_2135620                              3571 14 +     47717 ag--------g---------aa----g--------------------g------------gag------------gg--------ag
i Alouatta_palliata.k141_2135620                         T 194 I 202
s Alouatta_puruensis.k141_362188                               276 14 +      5663 ag--------g---------ga----a--------------------g------------gag------------gg--------ag
i Alouatta_puruensis.k141_362188                         T 201 I 209
s Alouatta_seniculus.k141_117119                             14937 14 +     50774 ag--------g---------ga----a--------------------g------------cag------------ga--------ag
i Alouatta_seniculus.k141_117119                         I 8 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185460  2 +    412891 ----------------------------------------------------------------------------G--------A-
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 7
s Aotus_azarae.k141_3104676                                  15513 14 -     33861 ag--------g---------aa----g--------------------g------------aag------------ga--------aa
i Aotus_azarae.k141_3104676                              T 203 I 203
s Aotus_griseimembra.k141_2240599                            15533 14 -     34016 ag--------g---------aa----g--------------------g------------aag------------ga--------aa
i Aotus_griseimembra.k141_2240599                        T 219 I 227
s Aotus_nancymaae.KZ198451.1                               4297930 14 -   5030052 ag--------g---------aa----g--------------------g------------aag------------ga--------aa
i Aotus_nancymaae.KZ198451.1                             T 210 I 210
s Aotus_trivirgatus.k141_2152450                             15535  9 -     34685 ag--------g---------aa----g--------------------g------------aa-------------------------
i Aotus_trivirgatus.k141_2152450                         T 215 I 219
s Aotus_vociferans.k141_344750                               28659 14 -     47192 ag--------g---------aa----g--------------------g------------aag------------ga--------aa
i Aotus_vociferans.k141_344750                           T 215 I 215
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4868  2 +     43469 ----------------------------------------------------------------------------G--------A-
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 7
s Aplodontia_rufa.AprRuf_scaffold_68852                      12714  6 +     20879 AG--------A---------GA----G------------------------------------------------------------
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 8 C 0
s Avahi_laniger.k141_765380                                  53786  6 -     92717 AG--------A---------AA----G------------------------------------------------------------
i Avahi_laniger.k141_765380                              C 0 I 18
s Avahi_peyrierasi.k141_1424874                              54413  6 +     85213 AG--------A---------AA----G------------------------------------------------------------
i Avahi_peyrierasi.k141_1424874                          C 0 I 13
s Callibella_humilis.k141_1278103                             5268 18 -     10423 ag--------g---------aaggaag--------------------g------------aag------------ga--------ag
i Callibella_humilis.k141_1278103                        T 268 I 264
s Callimico_goeldii.k141_1091182                             24739 14 +     31915 ag--------g---------aa----g--------------------g------------aag------------ga--------ag
i Callimico_goeldii.k141_1091182                         T 266 I 266
s Callithrix_geoffroyi.k119_512088                            5234 14 +      5267 ag--------g---------aa----g--------------------g------------aag------------ga--------ag
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590448 14 - 189096842 ag--------g---------aa----g--------------------g------------aag------------ga--------ag
i Callithrix_jacchus.pat_scaffold_3                      T 242 I 242
s Callithrix_kuhlii.k119_1164682                             11979 14 -     12001 AG--------G---------AA----G--------------------G------------AAG------------GA--------AG
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002495  2 -  17673402 ----------------------------------------------------------------------------a--------a-
i Camelus_bactrianus.KN276810.1                          C 0 I 7
s Camelus_dromedarius.KN272107.1                           2334953  2 -   7040546 ----------------------------------------------------------------------------a--------a-
i Camelus_dromedarius.KN272107.1                         C 0 I 7
s Camelus_ferus.KB017975.1                                  403237  2 -   1652518 ----------------------------------------------------------------------------a--------a-
i Camelus_ferus.KB017975.1                               I 1 I 7
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    185336  2 -    185531 ----------------------------------------------------------------------------G--------A-
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 T 135
s Canis_lupus_dingo.QKWQ01000480.1                         9034722  2 -   9314153 ----------------------------------------------------------------------------g--------a-
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 7
s Canis_lupus_familiaris.chr16                            17958987  2 -  59632846 ----------------------------------------------------------------------------g--------a-
i Canis_lupus_familiaris.chr16                           C 0 I 218
s Canis_lupus_orion.HG994398.1                            18500499  2 +  63665305 ----------------------------------------------------------------------------g--------a-
i Canis_lupus_orion.HG994398.1                           C 0 I 7
s Capromys_pilorides.CapPil_scaffold_65020                    1164  2 -     12242 AG-------------------------------------------------------------------------------------
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 3
s Carlito_syrichta.NW_007247396.1                           201454 14 +    308752 ag--------g---------aa----g--------------------g------------aag------------ga--------ag
i Carlito_syrichta.NW_007247396.1                        I 8 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5222  2 -     11696 ----------------------------------------------------------------------------G--------A-
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 2
s Catagonus_wagneri.CatWag_scaffold_2839                     93132  2 +    217609 ----------------------------------------------------------------------------G--------A-
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 7
s Castor_canadensis.CasCan_scaffold_2074                    137181  6 +    179628 AC--------G---------GC----A------------------------------------------------------------
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          9893 14 -     11392 ag--------g---------aa----g--------------------g------------aag------------ga--------ag
i Cebuella_niveiventris.k141_1251222                     T 278 I 278
s Cebuella_pygmaea.k141_1309012                               5991 14 -      7577 ag--------g---------aa----g--------------------g------------aag------------ga--------ag
i Cebuella_pygmaea.k141_1309012                          T 248 I 248
s Cebus_albifrons.Contig27                                25652457 20 +  26074798 ag--------g---------aa----g--------------------g------------aaggaag--aa--a-ga--------a-
i Cebus_albifrons.Contig27                               T 447 I 441
s Cebus_olivaceus.k141_1764483                                 428 21 +     28840 aa--------g---------aa----g--------------------g------------aaggaagg-aa--a-ga--------a-
i Cebus_olivaceus.k141_1764483                           T 418 I 411
s Cebus_unicolor.k141_1837183                                  140 25 +     14051 aa--------g---------aa----g--------------------g------------aaggaagggaaggaggg--------a-
i Cebus_unicolor.k141_1837183                            T 431 I 420
s Cephalopachus_bancanus.k141_1423433                         5459 14 +     31688 ag--------g---------aa----g--------------------g------------aag------------ga--------ag
i Cephalopachus_bancanus.k141_1423433                    T 117 C 0
s Ceratotherium_simum.JH767749.1                          12231558  2 +  27778364 ----------------------------------------------------------------------------g--------a-
i Ceratotherium_simum.JH767749.1                         C 0 I 8
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2585  2 -     25243 ----------------------------------------------------------------------------G--------A-
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 I 8
s Cercocebus_atys.KQ010504.1                               4475769 14 +   4669795 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                         273 14 +     17872 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                            930 14 -     14043 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           8963 14 +     27781 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         9131 14 -     20310 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          12111 14 +     29689 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            6864 14 -     20078 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          14783 12 -     27936 ----------g---------ga----g--------------------a------------aag------------gg--------ag
i Cercopithecus_hamlyni.k141_187466                      I 99 C 0
s Cercopithecus_lowei.k141_1854285                            3651 14 -     17152 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38817190 14 +  39242232 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222882 14 -  21565898 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40000 14 -     53127 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                         251 14 +     13442 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14800 14 -     27947 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         14776 14 +     17596 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                           823 14 +     14005 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheirogaleus_major.k141_333249                             21166 14 -     52598 AG--------A---------AA----G--------------------G------------AAA------------AG--------AA
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16531 14 +     57038 ag--------a---------aa----g--------------------g------------aaa------------gg--------aa
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1252911  6 +   2543920 ag--------g---------ga----g------------------------------------------------------------
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2206961                            437 22 -     15524 agagaggaagg---------ga----g--------------------g------------cag------------ga--------aa
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18428760 14 -  18827391 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15197 14 -     50209 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422197 14 + 135778131 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1910709 14 +   2368649 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Colobus_angolensis.KN981557.1                          I 106 C 0
s Colobus_guereza.LG01                                   199948969  6 + 200372422 -------------------------------------------------------------AG------------GG--------AG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37243 14 +     84244 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Colobus_polykomos.k141_906115                          I 106 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14520  2 -     20389 ----------------------------------------------------------------------------G--------A-
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 4
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28601  2 -     87169 ----------------------------------------------------------------------------G--------A-
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 7
s Cricetomys_gambianus.CriGam_scaffold_18520                 50293  6 +     63868 aa--------a---------CA----A------------------------------------------------------------
i Cricetomys_gambianus.CriGam_scaffold_18520             I 2 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837185  5 +   1526836 AG--------A---------GA-----------------------------------------------------------------
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35871  6 +     51376 GG--------G---------TA----G------------------------------------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537382 14 -  12879189 AG--------A---------AA----G--------------------G------------AAG------------GA--------AA
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630234  2 +  20541912 ----------------------------------------------------------------------------g--------a-
i Desmodus_rotundus.KZ672289.1                           C 0 I 7
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673409  2 +   1390856 ----------------------------------------------------------------------------g--------a-
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 8
s Diceros_bicornis.DicBicMic_scaffold_5955                    6161  2 +    198055 ----------------------------------------------------------------------------G--------A-
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 8
s Eidolon_helvum.KE759718.1                                  10637  2 +     11740 ----------------------------------------------------------------------------g--------g-
i Eidolon_helvum.KE759718.1                              C 0 I 4
s Enhydra_lutris.KZ291758.1                               16329422  2 -  41312741 ----------------------------------------------------------------------------g--------a-
i Enhydra_lutris.KZ291758.1                              C 0 I 7
s Eptesicus_fuscus.JH977646.1                              2145831  2 -  14770903 ----------------------------------------------------------------------------g--------a-
i Eptesicus_fuscus.JH977646.1                            C 0 I 13
s Equus_asinus.JREZ01000139.1                              1283663  2 +   4378816 ----------------------------------------------------------------------------g--------a-
i Equus_asinus.JREZ01000139.1                            C 0 I 8
s Equus_caballus.CM000403.2                               18531483  2 -  39960074 ----------------------------------------------------------------------------g--------a-
i Equus_caballus.CM000403.2                              C 0 I 8
s Equus_przewalskii.KK951119.1                               33512  2 +    498745 ----------------------------------------------------------------------------g--------a-
i Equus_przewalskii.KK951119.1                           C 0 I 8
s Dinomys_branickii.DinBra_scaffold_21862                    36505  6 +     67921 AG--------A---------GA----G------------------------------------------------------------
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Erythrocebus_patas.Contig38                             21205365 14 -  21539334 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13878 14 -     14127 AG--------A---------AA----G--------------------G------------AAA------------GG--------AA
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6587 19 -     16928 AG---AAAGGA---------AA----G--------------------G------------AAA------------GG--------AA
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15611 19 -     25546 AG--------A---------AA----G--------------------G------------AAA-------GGAAAGG--------AA
i Eulemur_coronatus.k141_885031                          C 0 I 8
s Eulemur_flavifrons.k141_1184614                            12815 19 +     26330 ag--------a---------aa----g--------------------g------------aaag--g--aa--a-gg--------aa
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14050 19 +     23973 AG---AAAGGA---------AA----G--------------------G------------AAA------------GG--------AA
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12812 19 +     75513 ag--------a---------aa----g--------------------g------------aaag--g--aa--a-gg--------aa
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10742 19 +     97555 ag--------a---------aa----g--------------------g------------aaag--g--aa--a-gg--------aa
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              233 19 +     13026 ag--------a---------aa----g--------------------g------------aaag--g--aa--a-gg--------aa
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4286 19 -     17153 AG---AAAGGA---------AA----G--------------------G------------AAA------------GG--------AA
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13859 19 +    111500 AG--------A---------AA----G---------------GAAAGG------------AAA------------GG--------AA
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237065  2 + 206538554 ----------------------------------------------------------------------------g--------a-
i Felis_catus.CM001381.2                                 C 0 I 7
s Felis_catus_fca126.CM031415.1                           20195908  2 + 205367284 ----------------------------------------------------------------------------g--------a-
i Felis_catus_fca126.CM031415.1                          C 0 I 7
s Felis_nigripes.FelNig_flattened_line_20823                  9652  2 -     36744 ----------------------------------------------------------------------------G--------A-
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 7
s Fukomys_damarensis.KN121974.1                             850539  6 +   3816255 ag--------a---------ga----g------------------------------------------------------------
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1286  7 -      9135 ag--------a---------aa----g--------------------g---------------------------------------
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 I 4
s Gorilla_beringei.k141_3596273                              16169 14 -     32273 ag--------a---------aa----g--------------------g------------gag------------tg--------ag
i Gorilla_beringei.k141_3596273                          I 114 T 114
s Gorilla_gorilla.LT578341.1                             186338306 14 + 186649187 ag--------a---------aa----g--------------------g------------gag------------tg--------ag
i Gorilla_gorilla.LT578341.1                             I 113 T 113
s Hapalemur_alaotrensis.k141_170648                           6923 14 -     19426 AG--------A---------AA----G--------------------G------------AAA------------GG--------AA
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12072 14 -     15286 AG--------A---------AA----G--------------------G------------AAA------------GG--------AA
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13711 14 +     18253 ag--------a---------aa----g--------------------g------------aaa------------gg--------aa
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13812 14 -     41752 AG--------A---------AA----G--------------------G------------AAA------------GG--------AA
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13649 14 -     16460 AG--------A---------AA----G--------------------G------------AAA------------GG--------AA
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242434  2 +    327341 ----------------------------------------------------------------------------G--------A-
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 7
s Heterocephalus_glaber.JH602082.1                        20662328  6 +  22651954 ag--------C---------AA----G------------------------------------------------------------
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hoolock_leuconedys.ctg274                                    434867 14 +    630532 ag--------g---------aa----t--------------------c------------aag------------ga--------ag
i Hoolock_leuconedys.ctg274                                 I 4 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45128  2 +     55795 ----------------------------------------------------------------------------C--------A-
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 7
s Hystrix_cristata.HysCri_scaffold_5660                      83217  6 +    135385 AG--------G---------GA----G------------------------------------------------------------
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Indri_indri.k141_3655594                                   22607 14 +     31101 ag--------a---------aa----g--------------------g------------aaa------------gg--------aa
i Indri_indri.k141_3655594                               C 0 I 5
s Lasiurus_borealis.LasBor_scaffold_32767                    16479  2 -     42476 ----------------------------------------------------------------------------G--------A-
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 10
s Jaculus_jaculus.JH725527.1                               8276898  6 -   9596543 AG--------A---------GA----G------------------------------------------------------------
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lemur_catta.scaffold_24                                 15524164 14 -  30322482 AG--------A---------AA----G--------------------G------------AAA------------GG--------AA
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7530 35 +     64341 ag--------g---------aa----gtta---agtaag--------gaaggaaggaaagaag------------ga--------ag
i Leontocebus_fuscicollis.k141_1820339                   T 285 I 264
s Leontocebus_illigeri.k141_3350179                           4853 35 +      4941 ag--------g---------aa----gtta---agtaag--------gaaggaaggaaagaag------------ga--------ag
i Leontocebus_illigeri.k141_3350179                      I 18 C 0
s Leontocebus_nigricollis.k141_4610752                        7571 35 +     35603 ag--------g---------aa----gtta---agtaag--------gaaggaaggaaagaag------------ga--------ag
i Leontocebus_nigricollis.k141_4610752                   T 272 I 251
s Leontopithecus_chrysomelas.k141_1519602                    29259 14 +     38576 ag--------a---------ga----g--------------------g------------gag------------gg--------ag
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         25959 14 +     66356 ag--------a---------ga----g--------------------g------------gag------------gg--------ag
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         11058 14 -     23766 AG--------A---------AA----G--------------------G------------AAA------------GG--------AA
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29119 14 +     45836 AG--------A---------AA----G--------------------G------------AAA------------GG--------AA
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1657 14 +     25010 AG--------A---------AA----A--------------------G------------AAA------------GG--------AA
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27055 14 +     54090 AG--------A---------AA----G--------------------G------------AAA------------GG--------AA
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3043161  2 +   3914936 ----------------------------------------------------------------------------g--------a-
i Leptonychotes_weddellii.KB714746.1                     C 0 I 7
s Lepus_americanus.LepAme_scaffold_107385                     6567  7 -     14121 gg--------g---------aa----a--------------------g---------------------------------------
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 7
s Lophocebus_aterrimus.ctg367                              1437314 14 +   1826925 ag--------g---------ga----g--------------------a------------aag------------cg--------ag
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17955438  2 -  59628241 ----------------------------------------------------------------------------N--------N-
i Lycaon_pictus.CM007581.1                               I 211 I 7
s Macaca_arctoides.k141_2326796                               7130 14 +     40492 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59676389 14 +  60120075 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 12905 14 -     26193 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            80689 14 -    114318 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  6376 14 -     23192 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                15849 14 -     29190 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  24414 14 +     37952 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186839503 14 + 187317192 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458066 14 -  25927173 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  80262 14 +     89720 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 7263 14 +     20474 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   7063 14 -     14993 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  329929 14 -    668171 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 5376 14 -     24072 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26001 14 -     45290 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90730  2 +     94391 ----------------------------------------------------------------------------G--------G-
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 4
s Mandrillus_leucophaeus.scaffold280                      23937589 14 -  24302211 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               351713 14 +    752769 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              18608  1 +    737560 ----------------------------------------------------------------------------g----------
i Manis_javanica.JSZB01003497.1                          C 0 I 4
s Manis_pentadactyla.KN006162.1                              50597  2 -    317179 ----------------------------------------------------------------------------g--------a-
i Manis_pentadactyla.KN006162.1                          C 0 I 7
s Megaderma_lyra.MegLyr_scaffold_4542                        10441  2 -    207569 ----------------------------------------------------------------------------A--------G-
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 8
s Mellivora_capensis.MelCap_flattened_line_69365             10159  2 +     13704 ----------------------------------------------------------------------------G--------A-
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 7
s Mico_argentatus.k141_1239457                                5808 14 -      7380 ag--------g---------aa----g--------------------g------------aag------------ga--------ag
i Mico_argentatus.k141_1239457                           T 242 I 242
s Mico_humeralifer.k141_1976199                               4881 14 +     18990 ag--------g---------aa----g--------------------g------------aag------------ga--------ag
i Mico_humeralifer.k141_1976199                          I 18 C 0
s Mico_schneideri.k141_1950671                                      5820 14 -      7356 ag--------g---------aa----g--------------------g------------aag------------ga--------ag
i Mico_schneideri.k141_1950671                                 T 242 I 242
s Microcebus_murinus.CM007674.1                           18291589 14 -  93316391 ag--------a---------aa----g--------------------g------------aaa------------ag--------aa
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                15766  2 -     19307 ----------------------------------------------------------------------------G--------A-
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 4
s Miniopterus_natalensis.LDJU01000034.1                    1850724  2 +   8254450 ----------------------------------------------------------------------------c--------a-
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 11
s Miniopterus_schreibersii.MinSch_scaffold_18080             34405  2 +     64694 ----------------------------------------------------------------------------C--------A-
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 11
s Miopithecus_ogouensis.k141_534055                           9298 14 -     28506 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6029  2 -      8324 ----------------------------------------------------------------------------G--------A-
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 7
s Mirza_zaza.k141_952172                                      9134 14 -     37649 AG--------A---------AA----G--------------------G------------AAA------------GG--------AA
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141733  2 -    366855 ----------------------------------------------------------------------------G--------A-
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 7
s Mungos_mungo.MunMun_flattened_line_23663                   35534  2 +     37127 ----------------------------------------------------------------------------G--------A-
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 7
s Murina_feae.MurFea_scaffold_85699                           6928  2 +     14753 ----------------------------------------------------------------------------G--------A-
i Murina_feae.MurFea_scaffold_85699                      C 0 I 12
s Mustela_putorius.JH418006.1                               301572  2 -  14710649 ----------------------------------------------------------------------------g--------a-
i Mustela_putorius.JH418006.1                            C 0 I 7
s Myotis_brandtii.KE162005.1                                280571  2 -  10118263 ----------------------------------------------------------------------------g--------a-
i Myotis_brandtii.KE162005.1                             C 0 I 12
s Myotis_davidii.KB100139.1                                1587833  2 -   6019432 ----------------------------------------------------------------------------g--------a-
i Myotis_davidii.KB100139.1                              C 0 I 12
s Myotis_lucifugus.GL429869.1                              3903925  2 -   4330536 ----------------------------------------------------------------------------g--------a-
i Myotis_lucifugus.GL429869.1                            C 0 I 12
s Myotis_myotis.MyoMyo_scaffold_281845                          77  2 +      1835 ----------------------------------------------------------------------------G--------A-
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 I 9
s Myocastor_coypus.MyoCoy_scaffold_10123                     71350  6 -     80779 AG--------G---------TC----A------------------------------------------------------------
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Nannospalax_galili.KL204047.1                            2034165  9 -   3037898 GA-----GAAG---------GG----G------------------------------------------------------------
i Nannospalax_galili.KL204047.1                          I 2 C 0
s Nasalis_larvatus.k141_413338                               15300 14 +     21681 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20307615  2 +  31847680 ----------------------------------------------------------------------------g--------a-
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 7
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149506  2 -   9404916 ----------------------------------------------------------------------------g--------a-
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 7
s Odobenus_rosmarus.KB229312.1                              506765  2 -   2017862 ----------------------------------------------------------------------------g--------a-
i Odobenus_rosmarus.KB229312.1                           C 0 I 7
s Otocyon_megalotis.JAEUCK010005147.1                       462454  2 -    559221 ----------------------------------------------------------------------------g--------a-
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 7
s Ochotona_princeps.JH802162.1                             1363627  7 +   3988456 ag--------g---------ga----a--------------------a---------------------------------------
i Ochotona_princeps.JH802162.1                           C 0 I 3
s Octodon_degus.JH651603.1                                  746960  6 +  11899542 aG--------G---------TG----G------------------------------------------------------------
i Octodon_degus.JH651603.1                               C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147430  7 + 174332312 gg--------g---------aa----a--------------------g---------------------------------------
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 3
s Pan_paniscus.KQ411613.1                                    44257 14 +     80009 ag--------a---------aa----g--------------------g------------gag------------gg--------ag
i Pan_paniscus.KQ411613.1                                I 113 T 113
s Pan_troglodytes.NBAG03001836.1                             30182 14 +     51860 ag--------a---------aa----g--------------------g------------gag------------gg--------ag
i Pan_troglodytes.NBAG03001836.1                         I 131 T 188
s Panthera_onca.PanOnc_flattened_line_3271                  151267  2 +    230217 ----------------------------------------------------------------------------G--------A-
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 7
s Panthera_pardus.KV860321.1                                264476  2 +  18783137 ----------------------------------------------------------------------------g--------a-
i Panthera_pardus.KV860321.1                             C 0 I 7
s Panthera_tigris.KE722367.1                               4721355  2 -   8748460 ----------------------------------------------------------------------------g--------a-
i Panthera_tigris.KE722367.1                             C 0 I 7
s Papio_anubis.CM001495.2                                183443391 14 + 183742232 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7037 14 +     20448 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563849 14 +  20919399 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   5781 14 +     41871 gg--------g---------ga----g--------------------a------------aag------------gg--------ag
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     9074 14 +     27711 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  9143 14 +      9205 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12764  2 -     78924 ----------------------------------------------------------------------------G--------A-
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 7
s Petromus_typicus.PetTyp_scaffold_42190                     28229  6 -     29689 GG--------G---------GA----G------------------------------------------------------------
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Piliocolobus_badius.k141_1234363                           43791 14 +     62158 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        38538 14 +     89929 AG--------G---------GA----G--------------------A------------AAG------------GG--------AG
i Piliocolobus_gordonorum.k141_381342                    I 106 C 0
s Piliocolobus_kirkii.k141_448987                            39954 14 +     51399 AG--------G---------GA----G--------------------A------------AAG------------GG--------AG
i Piliocolobus_kirkii.k141_448987                        I 106 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296192 14 -  14605196 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Piliocolobus_tephrosceles.PDMG02000141.1               I 106 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1869  2 +     22620 ----------------------------------------------------------------------------G--------A-
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 11
s Pongo_abelii.CM009266.2                                189131295 14 + 189387572 ag--------a---------aa----g--------------------g------------gag------------tg--------ag
i Pongo_abelii.CM009266.2                                C 0 T 109
s Pongo_pygmaeus.ctg66                                     9570902 14 +   9816681 ag--------a---------aa----g--------------------g------------gag------------tg--------ag
i Pongo_pygmaeus.ctg66                                   C 0 T 108
s Presbytis_comata.k141_677006                               73476 14 -     81375 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Presbytis_comata.k141_677006                           I 106 C 0
s Presbytis_mitrata.k141_1087752                              5296 14 +     19060 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Presbytis_mitrata.k141_1087752                         I 106 C 0
s Prolemur_simus.MPIZ01000396.1                            2596844 14 -   4620579 ag--------a---------aa----g--------------------g------------aaa------------gg--------aa
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Pteronotus_parnellii.KE909381.1                            15188  2 -     21811 ----------------------------------------------------------------------------g--------a-
i Pteronotus_parnellii.KE909381.1                        C 0 I 7
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40349  2 +     42204 ----------------------------------------------------------------------------G--------A-
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 7
s Pteropus_alecto.KB030862.1                              22976896  2 +  28871421 ----------------------------------------------------------------------------g--------a-
i Pteropus_alecto.KB030862.1                             C 0 I 4
s Pteropus_vampyrus.KN534172.1                                6949  2 -      8028 ----------------------------------------------------------------------------g--------g-
i Pteropus_vampyrus.KN534172.1                           C 0 I 4
s Puma_concolor.QAVW01001104.1                            20274421  2 -  38429054 ----------------------------------------------------------------------------g--------a-
i Puma_concolor.QAVW01001104.1                           C 0 I 7
s Propithecus_coquerelli.NW_012148875.1                     990830  6 +   2598838 ag--------a---------aa----g------------------------------------------------------------
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 8
s Propithecus_coronatus.k141_347390                          29142  6 +     38485 ag--------a---------aa----g------------------------------------------------------------
i Propithecus_coronatus.k141_347390                      C 0 I 8
s Propithecus_diadema.k141_58108                              1185  6 -     13098 AG--------A---------AA----G------------------------------------------------------------
i Propithecus_diadema.k141_58108                         C 0 I 8
s Propithecus_edwardsi.k141_1176054                          26663  6 +     35766 ag--------a---------aa----g------------------------------------------------------------
i Propithecus_edwardsi.k141_1176054                      C 0 I 8
s Propithecus_perrieri.k141_1200571                           4850  6 -     24134 AG--------A---------AA----G------------------------------------------------------------
i Propithecus_perrieri.k141_1200571                      C 0 I 8
s Propithecus_tattersalli.k141_790011                        28675  6 -     67325 AG--------A---------AA----G------------------------------------------------------------
i Propithecus_tattersalli.k141_790011                    C 0 I 8
s Propithecus_verreauxi.k141_956661                           4898  6 -      6182 AG--------A---------AA----G------------------------------------------------------------
i Propithecus_verreauxi.k141_956661                      C 0 I 8
s Pygathrix_cinerea.k141_1153803                             15309 14 -     91421 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Pygathrix_cinerea.k141_1153803                         I 110 C 0
s Pygathrix_nigripes_b.ctg100                                 7609429 14 +   7812017 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Pygathrix_nigripes_b.ctg100                               I 110 C 0
s Pygathrix_nigripes_a.k141_215492                             15281 14 -     72585 ag--------g---------ga----G--------------------a------------aag------------gg--------ag
i Pygathrix_nigripes_a.k141_215492                         I 110 C 0
s Rhinopithecus_bieti.k119_217274                             6992 14 -     11128 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Rhinopithecus_bieti.k119_217274                        I 107 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236341 14 - 195417433 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Rhinopithecus_roxellana.NC_044550.1                    I 103 C 0
s Rhinopithecus_strykeri.ctg102                            7671997 14 +   7961872 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Rhinopithecus_strykeri.ctg102                          I 107 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87918  2 -     96226 ----------------------------------------------------------------------------G--------G-
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 4
s Saguinus_bicolor.k141_2619299                               8207 43 -      8359 ag--------g---------aa----gtta---agtaag--------gaaggaaggaaagaag------------gaagggaaggag
i Saguinus_bicolor.k141_2619299                          I 18 T 105
s Saguinus_imperator.k141_2524406                             2165 32 +      2197 ag--------gaagttaagtaa----g--------------------gaaggaaggaaagaag------------g-----------
i Saguinus_imperator.k141_2524406                        I 18 T 94
s Saguinus_inustus.k141_699149                               13584 35 +     13640 ag--------gaagttaagtaa----g--------------------gaaggaaggaaagaag------------ga--------ag
i Saguinus_inustus.k141_699149                           I 9 C 0
s Saguinus_labiatus.k141_285685                               8453 35 +      8564 ag--------gaagttaagtaa----g--------------------gaaggaaggaaagaag------------ga--------ag
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469303 35 + 209938924 ag--------g---------aa----gtta---agtaag--------gaaggaaggaaagaag------------ga--------ag
i Saguinus_midas.LG03                                    T 479 I 458
s Saguinus_mystax.k141_374627                                 8009 35 -      9399 ag--------gaagttaagtaa----g--------------------gaaagaaggaaagaag------------ga--------ag
i Saguinus_mystax.k141_374627                            T 408 I 387
s Saimiri_boliviensis.NW_024100920.1                     119951159 14 - 121099817 aa--------a---------ga----g--------------------g------------gag------------gg--------ag
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23498 14 +     46362 aa--------a---------ga----g--------------------g------------gag------------gg--------ag
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               23593 14 +     45824 aa--------a---------ga----g--------------------g------------gag------------gg--------ag
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             40272 14 -     64574 aa--------a---------ga----g--------------------g------------gag------------gg--------ag
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               3344 14 -     23631 aa--------a---------ga----g--------------------g------------gag------------gg--------ag
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 23489 14 -     61129 aa--------a---------ga----g--------------------g------------gag------------gg--------ag
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420689 13 -   5703754 ag--------g---------aa----g--------------------g------------aag------------ga--------a-
i Sapajus_apella.ctg103                                  C 0 I 76
s Sapajus_macrocephalus.k141_351809                          55730 13 -     80660 ag--------g---------aa----g--------------------g------------aag------------ga--------a-
i Sapajus_macrocephalus.k141_351809                      T 370 I 371
s Semnopithecus_entellus.k141_1672505                          173 14 -     12572 AG--------G---------GA----G--------------------A------------AAG------------GG--------AG
i Semnopithecus_entellus.k141_1672505                    I 8 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27023 14 +     39453 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Semnopithecus_hypoleucos.k141_1615806                  I 110 C 0
s Semnopithecus_johnii.k141_670120                            7541 14 +     27826 ag--------g---------ga----g--------------------a------------agg------------gg--------ag
i Semnopithecus_johnii.k141_670120                       I 109 C 0
s Semnopithecus_priam.k141_638794                             7063 14 -     19483 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Semnopithecus_priam.k141_638794                        I 110 C 0
s Semnopithecus_schistaceus.k141_1572284                       364 14 -     12762 AG--------G---------GA----G--------------------A------------ACG------------GG--------AG
i Semnopithecus_schistaceus.k141_1572284                 I 8 C 0
s Semnopithecus_vetulus.k141_910252                            225 14 +     13763 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Semnopithecus_vetulus.k141_910252                      I 8 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              18437  2 -    196729 ----------------------------------------------------------------------------G--------A-
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 7
s Sus_scrofa.CM000828.4                                    6810879  2 +  69701581 ----------------------------------------------------------------------------g--------a-
i Sus_scrofa.CM000828.4                                  C 0 I 7
s Tadarida_brasiliensis.TadBra_scaffold_25820                10910  2 +     41958 ----------------------------------------------------------------------------G--------A-
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 12
s Tapirus_indicus.TapInd_scaffold_9301                      118877  2 -    156842 ----------------------------------------------------------------------------G--------A-
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 7
s Tapirus_terrestris.TapTer_scaffold_755                    387334  2 +    539355 ----------------------------------------------------------------------------G--------A-
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 7
s Tarsius_lariang.k141_2201908                               26461 14 +     70052 ag--------g---------aa----g--------------------g------------aag------------ga--------ag
i Tarsius_lariang.k141_2201908                           T 108 C 0
s Tarsius_wallacei.k141_254427                                1366 14 -     16117 aa--------a---------ga----g--------------------g------------gag------------gg--------ag
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428709 14 + 186847797 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81307  2 +    610378 ----------------------------------------------------------------------------G--------A-
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 7
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105550  6 +    114563 AG--------T---------GA----G------------------------------------------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Trachypithecus_auratus.k141_722599                         11114 14 -     20410 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Trachypithecus_auratus.k141_722599                     I 110 C 0
s Trachypithecus_crepusculus.k141_582567                       228 14 -     12674 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Trachypithecus_crepusculus.k141_582567                 I 110 C 0
s Trachypithecus_cristatus.k141_580354                       11215 14 +     19930 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Trachypithecus_cristatus.k141_580354                   I 110 C 0
s Trachypithecus_francoisi.k141_1412647                       7626 14 -     19997 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            47765 14 -     60166 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Trachypithecus_geei.k141_277701                        I 109 C 0
s Trachypithecus_germaini.k141_912491                        15237 14 -     27529 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Trachypithecus_germaini.k141_912491                    I 110 C 0
s Trachypithecus_hatinhensis.k141_143409                     15181 14 -     18194 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Trachypithecus_hatinhensis.k141_143409                 I 110 C 0
s Trachypithecus_laotum.k141_907409                           8893 14 -     21137 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    7596 14 -     10723 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         6768 14 +      9834 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Trachypithecus_melamera.k141_434728                    I 110 C 0
s Trachypithecus_obscurus.k141_190785                        25081 14 +     32220 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Trachypithecus_obscurus.k141_190785                    I 110 C 0
s Trachypithecus_phayrei.ctg124                            5939183 14 +   6242583 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Trachypithecus_phayrei.ctg124                          I 110 C 0
s Trachypithecus_pileatus.k141_2007326                        8434 14 +     20839 ag--------g---------ga----g--------------------a------------aag------------gg--------ag
i Trachypithecus_pileatus.k141_2007326                   I 109 C 0
s Tupaia_chinensis.KB320699.1                              2155690  4 +   4065304 ---------------------------------------------------------------------------ag--------ga
i Tupaia_chinensis.KB320699.1                            T 215 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9343  4 -     10553 ---------------------------------------------------------------------------AG--------GA
i Tupaia_tana.TupTan_flattened_line_97126                I 21 C 0
s Ursus_maritimus.KK499267.1                               4850549  2 -   5085361 ----------------------------------------------------------------------------g--------a-
i Ursus_maritimus.KK499267.1                             C 0 I 7
s Varecia_rubra.k141_590885                                  11508 15 +     50397 AG-------AA---------AA----G--------------------G------------AAA------------GG--------AA
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11567 15 +     24756 AG-------AA---------AA----G--------------------G------------AAA------------GG--------AA
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371995  2 -   5488506 ----------------------------------------------------------------------------g--------a-
i Vicugna_pacos.KN270157.1                               C 0 I 7
s Vulpes_lagopus.VulLag_flattened_line_30954                 10902  2 -     43706 ----------------------------------------------------------------------------G--------A-
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 7
s Zalophus_californianus.ZalCal_flattened_line_17732          5478  2 +     86975 ----------------------------------------------------------------------------g--------a-
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 7
s Zapus_hudsonius.ZapHud_scaffold_11398                      14994  6 +     63895 AG--------A---------GA----G------------------------------------------------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Echinops_telfairi.JH980293.1                            48780689  3 + 111700974 I
e Otolemur_garnettii.GL873799.1                             696396  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         4233  0 +      8798 C
e Galago_senegalensis.k141_631886                             4403  0 +     11339 C
e Galago_moholi.ctg2040                                     426713  0 -    453645 C
e Mus_pahari.LT608297.1                                   31355110  4 -  89631738 I
e Mus_spretus.CM004101.1                                  90752512  4 - 130317789 I
e Mus_musculus.chr8                                       87650451  4 - 129401213 I
e Mus_caroli.LT608237.1                                   84361453  4 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Loris_tardigradus.ctg83                                  1004782  0 +   6120653 C
e Loris_lydekkerianus.k141_2539221                            5962  0 +     11245 C
e Perodicticus_potto.k141_1092580                             8620  0 +     25941 C
e Perodicticus_ibeanus.k141_855320                           10214  0 +     13100 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Xerus_inauris.XerIna_scaffold_2302                          1179  7 +    224448 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   53362 63 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4293354  3 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   6516  8 +      8208 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 72732  9 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             30850  6 +     97271 I
e Spermophilus_dauricus.KZ294078.1                         1954051  7 -   3870691 I
e Sorex_araneus.JH798187.1                                13651056 93 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               3814 63 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_42075                      411  4 -     30804 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    153257 71 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570713  4 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Psammomys_obesus.NESX01036370.1                            10483  4 -     21651 I
e Procavia_capensis.ProCapCap_scaffold_85530                 13455  3 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Peromyscus_maniculatus.KI615324.1                       18194865  4 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orycteropus_afer.OryAfe_flattened_line_144387               9955  3 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80239  4 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   25239  4 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761680  0 + 199412804 C
e Nycticebus_coucang.k141_1127096                              250  0 +      2075 C
e Nycticebus_bengalensis.LG01                            102586326  0 - 196305487 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189371  9 +    196477 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5056  0 +     14296 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11260571  4 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    22438  3 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182333  4 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 32827 16 +    140813 I
e Marmota_marmota.CZRN01000018.1                          33103196  7 -  40650429 I
e Loxodonta_africana.GL010049.1                            4217432  4 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Ictidomys_tridecemlineatus.JH393364.1                    7520996  7 -   7955117 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                1000  3 +      7595 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32714  2 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31472  2 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Galagoides_demidoff.k141_1711393                            1701  0 +     41679 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3328282 71 -   7059049 I
e Ellobius_talpinus.LOJH01081419.1                             523  4 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          20392  4 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1097777  3 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            63648  8 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Crocidura_indochinensis.CroInd_scaffold_37019               3028 88 -     19598 I
e Cricetulus_griseus.LT883664.1                           11667658  4 + 224834208 I
e Condylura_cristata.JH655891.1                           17548142 67 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            173497  9 +    839153 I
e Choloepus_didactylus.ChoDid_scaffold_45914                 18421  8 +     19366 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870             641  8 -      8501 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e CanFam4.chr16                                           17799210 78 -  60362399 I
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Arctocebus_calabarensis.k141_2318572                       11570  0 +     14667 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     70877 18 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       6814 2 +     62944 aa
s Gorilla_beringei.k141_3596273                              16069 2 -     32273 aa
i Gorilla_beringei.k141_3596273                          T 114 I 112
s Gorilla_gorilla.LT578341.1                             186338207 2 + 186649187 aa
i Gorilla_gorilla.LT578341.1                             T 113 I 111
s Hoolock_leuconedys.ctg274                                    434881 2 +    630532 aa
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Pan_paniscus.KQ411613.1                                    44158 2 +     80009 aa
i Pan_paniscus.KQ411613.1                                T 113 I 111
s Pan_troglodytes.KZ622849.1                                 22360 2 +    110857 aa
i Pan_troglodytes.KZ622849.1                             I 14 I 1
s Pongo_abelii.CM009266.2                                189131200 2 + 189387572 aa
i Pongo_abelii.CM009266.2                                T 109 I 107
s Pongo_pygmaeus.ctg66                                     9570808 2 +   9816681 aa
i Pongo_pygmaeus.ctg66                                   T 108 I 106
e Echinops_telfairi.JH980293.1                            48780689 3 + 111700974 I
e Otolemur_garnettii.GL873799.1                             696396 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         4233 0 +      8798 C
e Galago_senegalensis.k141_631886                             4403 0 +     11339 C
e Galago_moholi.ctg2040                                     426713 0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          55743 371 -     80660 I
e Sapajus_apella.ctg103                                    5420702 76 -   5703754 I
e Saimiri_ustus.k141_1484609                                 23503 0 -     61129 C
e Saimiri_sciureus.k141_2278166                               3358 0 -     23631 C
e Saimiri_oerstedii.k141_1487881                             40286 0 -     64574 C
e Saimiri_macrodon.k141_716185                               23607 0 +     45824 C
e Saimiri_cassiquiarensis.k141_2188234                       23512 0 +     46362 C
e Saimiri_boliviensis.NW_024100920.1                     119951173 0 - 121099817 C
e Saguinus_mystax.k141_374627                                 8044 387 -      9399 I
e Saguinus_midas.LG03                                    209469338 458 + 209938924 I
e Saguinus_labiatus.k141_285685                               8488 0 +      8564 C
e Saguinus_inustus.k141_699149                               13619 0 +     13640 C
e Saguinus_imperator.k141_2524406                             2197 94 +      2197 T
e Saguinus_bicolor.k141_2619299                               8250 105 -      8359 T
e Mico_schneideri.k141_1950671                                      5834 242 -      7356 I
e Mico_humeralifer.k141_1976199                               4895 0 +     18990 C
e Mico_argentatus.k141_1239457                                5822 242 -      7380 I
e Leontopithecus_rosalia.k141_464620                         25973 0 +     66356 C
e Leontopithecus_chrysomelas.k141_1519602                    29273 0 +     38576 C
e Leontocebus_nigricollis.k141_4610752                        7606 251 +     35603 I
e Leontocebus_illigeri.k141_3350179                           4888 0 +      4941 C
e Leontocebus_fuscicollis.k141_1820339                        7565 264 +     64341 I
e Chiropotes_albinasus.k141_2206961                            459 0 -     15524 C
e Cebus_unicolor.k141_1837183                                  165 420 +     14051 I
e Cebus_olivaceus.k141_1764483                                 449 411 +     28840 I
e Cebus_albifrons.Contig27                                25652477 441 +  26074798 I
e Cebuella_pygmaea.k141_1309012                               6005 248 -      7577 I
e Cebuella_niveiventris.k141_1251222                          9907 278 -     11392 I
e Callithrix_kuhlii.k119_1164682                             11993 0 -     12001 C
e Callithrix_jacchus.pat_scaffold_3                       23590462 242 - 189096842 I
e Callithrix_geoffroyi.k119_512088                            5248 0 +      5267 C
e Callimico_goeldii.k141_1091182                             24753 266 +     31915 I
e Callibella_humilis.k141_1278103                             5286 264 -     10423 I
e Aotus_vociferans.k141_344750                               28673 215 -     47192 I
e Aotus_trivirgatus.k141_2152450                             15544 219 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4297944 210 -   5030052 I
e Aotus_griseimembra.k141_2240599                            15547 227 -     34016 I
e Aotus_azarae.k141_3104676                                  15527 203 -     33861 I
e Alouatta_seniculus.k141_117119                             14951 0 +     50774 C
e Alouatta_puruensis.k141_362188                               290 209 +      5663 I
e Alouatta_palliata.k141_2135620                              3585 202 +     47717 I
e Alouatta_nigerrima.k141_3472759                            18198 205 -     18578 I
e Alouatta_macconnelli.k141_918386                             612 205 -      9457 I
e Alouatta_juara.k141_1509701                                24891 205 +     25266 I
e Alouatta_discolor.k141_566626                              11269 0 +     28687 C
e Alouatta_caraya.k141_1701091                                 618 202 -     36483 I
e Alouatta_belzebul.k141_3560514                              7504 207 +     51355 I
e Mus_pahari.LT608297.1                                   31355110 4 -  89631738 I
e Mus_spretus.CM004101.1                                  90752512 4 - 130317789 I
e Mus_musculus.chr8                                       87650451 4 - 129401213 I
e Mus_caroli.LT608237.1                                   84361453 4 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Loris_tardigradus.ctg83                                  1004782 0 +   6120653 C
e Loris_lydekkerianus.k141_2539221                            5962 0 +     11245 C
e Perodicticus_potto.k141_1092580                             8620 0 +     25941 C
e Perodicticus_ibeanus.k141_855320                           10214 0 +     13100 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      15000 0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5480 7 +     86975 I
e Xerus_inauris.XerIna_scaffold_2302                          1179 7 +    224448 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 10904 7 -     43706 I
e Vicugna_pacos.KN270157.1                                 5371997 7 -   5488506 I
e Varecia_variegata.k141_1128296                             11582 0 +     24756 C
e Varecia_rubra.k141_590885                                  11523 0 +     50397 C
e Ursus_maritimus.KK499267.1                               4850551 7 -   5085361 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   53362 63 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     9347 0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2155694 0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4293354 3 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Trachypithecus_pileatus.k141_2007326                        8448 0 +     20839 C
e Trachypithecus_phayrei.ctg124                            5939197 0 +   6242583 C
e Trachypithecus_obscurus.k141_190785                        25095 0 +     32220 C
e Trachypithecus_melamera.k141_434728                         6782 0 +      9834 C
e Trachypithecus_leucocephalus.k141_587342                    7610 0 -     10723 C
e Trachypithecus_laotum.k141_907409                           8907 0 -     21137 C
e Trachypithecus_hatinhensis.k141_143409                     15195 0 -     18194 C
e Trachypithecus_germaini.k141_912491                        15251 0 -     27529 C
e Trachypithecus_geei.k141_277701                            47779 0 -     60166 C
e Trachypithecus_francoisi.k141_1412647                       7640 0 -     19997 C
e Trachypithecus_cristatus.k141_580354                       11229 0 +     19930 C
e Trachypithecus_crepusculus.k141_582567                       242 0 -     12674 C
e Trachypithecus_auratus.k141_722599                         11128 0 -     20410 C
e Tonatia_saurophila.TonSau_scaffold_294                     81309 7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   6516 8 +      8208 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              105556 0 +    114563 C
e Theropithecus_gelada.CM009954.1                        186428723 0 + 186847797 C
e Tarsius_wallacei.k141_254427                                1380 0 -     16117 C
e Tarsius_lariang.k141_2201908                               26475 0 +     70052 C
e Tapirus_terrestris.TapTer_scaffold_755                    387336 7 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      118879 7 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 72732 9 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                10912 12 +     41958 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6810881 7 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629              18439 7 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             30850 6 +     97271 I
e Spermophilus_dauricus.KZ294078.1                         1954051 7 -   3870691 I
e Sorex_araneus.JH798187.1                                13651056 93 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               3814 63 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_42075                      411 4 -     30804 I
e Semnopithecus_vetulus.k141_910252                            239 0 +     13763 C
e Semnopithecus_schistaceus.k141_1572284                       378 0 -     12762 C
e Semnopithecus_priam.k141_638794                             7077 0 -     19483 C
e Semnopithecus_johnii.k141_670120                            7555 0 +     27826 C
e Semnopithecus_hypoleucos.k141_1615806                      27037 0 +     39453 C
e Semnopithecus_entellus.k141_1672505                          187 0 -     12572 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    153257 71 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                87920 4 -     96226 I
e Rhinopithecus_strykeri.ctg102                            7672011 0 +   7961872 C
e Rhinopithecus_roxellana.NC_044550.1                     91236355 0 - 195417433 C
e Rhinopithecus_bieti.k119_217274                             7006 0 -     11128 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570713 4 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Pygathrix_nigripes_a.k141_215492                             15295 0 -     72585 C
e Pygathrix_nigripes_b.ctg100                                 7609443 0 +   7812017 C
e Pygathrix_cinerea.k141_1153803                             15323 0 -     91421 C
e Puma_concolor.QAVW01001104.1                            20274423 7 -  38429054 I
e Pteropus_vampyrus.KN534172.1                                6951 4 -      8028 I
e Pteropus_alecto.KB030862.1                              22976898 4 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         40351 7 +     42204 I
e Pteronotus_parnellii.KE909381.1                            15190 7 -     21811 I
e Psammomys_obesus.NESX01036370.1                            10483 4 -     21651 I
e Propithecus_verreauxi.k141_956661                           4904 8 -      6182 I
e Propithecus_tattersalli.k141_790011                        28681 8 -     67325 I
e Propithecus_perrieri.k141_1200571                           4856 8 -     24134 I
e Propithecus_edwardsi.k141_1176054                          26669 8 +     35766 I
e Propithecus_diadema.k141_58108                              1191 8 -     13098 I
e Propithecus_coronatus.k141_347390                          29148 8 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     990836 8 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2596858 0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                 13455 3 -     22811 I
e Presbytis_mitrata.k141_1087752                              5310 0 +     19060 C
e Presbytis_comata.k141_677006                               73490 0 -     81375 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             1871 11 +     22620 I
e Piliocolobus_tephrosceles.PDMG02000141.1                14296206 0 -  14605196 C
e Piliocolobus_kirkii.k141_448987                            39968 0 +     51399 C
e Piliocolobus_gordonorum.k141_381342                        38552 0 +     89929 C
e Piliocolobus_badius.k141_1234363                           43805 0 +     62158 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     28235 0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18194865 4 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12766 7 -     78924 I
e Papio_ursinus.k141_3428135                                  9157 0 +      9205 C
e Papio_papio.k141_802527                                     9088 0 +     27711 C
e Papio_kindae.k141_1936966                                   5795 0 +     41871 C
e Papio_hamadryas.Contig39                                20563863 0 +  20919399 C
e Papio_cynocephalus.k141_4307930                             7051 0 +     20448 C
e Papio_anubis.CM001495.2                                183443405 0 + 183742232 C
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4721357 7 -   8748460 I
e Panthera_pardus.KV860321.1                                264478 7 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  151269 7 +    230217 I
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       462456 7 -    559221 I
e Oryctolagus_cuniculus.CM000791.1                        67147437 3 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387               9955 3 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80239 4 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   25239 4 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              506767 7 -   2017862 I
e Octodon_degus.JH651603.1                                  746966 0 +  11899542 C
e Ochotona_princeps.JH802162.1                             1363634 3 +   3988456 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761680 0 + 199412804 C
e Nycticebus_coucang.k141_1127096                              250 0 +      2075 C
e Nycticebus_bengalensis.LG01                            102586326 0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9149508 7 -   9404916 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20307617 7 +  31847680 I
e Nasalis_larvatus.k141_413338                               15314 0 +     21681 C
e Nannospalax_galili.KL204047.1                            2034174 0 -   3037898 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189371 9 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_281845                          79 9 +      1835 I
e Myotis_lucifugus.GL429869.1                              3903927 12 -   4330536 I
e Myotis_davidii.KB100139.1                                1587835 12 -   6019432 I
e Myotis_brandtii.KE162005.1                                280573 12 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     71356 0 -     80779 C
e Mustela_putorius.JH418006.1                               301574 7 -  14710649 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5056 0 +     14296 C
e Murina_feae.MurFea_scaffold_85699                           6930 12 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   35536 7 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 141735 7 -    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Mirza_zaza.k141_952172                                      9148 0 -     37649 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         6031 7 -      8324 I
e Miopithecus_ogouensis.k141_534055                           9312 0 -     28506 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             34407 11 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1850726 11 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11260571 4 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                15768 4 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    22438 3 -    145209 I
e Microcebus_murinus.CM007674.1                           18291603 0 -  93316391 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182333 4 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 32827 16 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365             10161 7 +     13704 I
e Megaderma_lyra.MegLyr_scaffold_4542                        10443 8 -    207569 I
e Marmota_marmota.CZRN01000018.1                          33103196 7 -  40650429 I
e Manis_pentadactyla.KN006162.1                              50599 7 -    317179 I
e Manis_javanica.JSZB01003497.1                              18609 4 +    737560 I
e Mandrillus_sphinx.Contig270                               351727 0 +    752769 C
e Mandrillus_leucophaeus.scaffold280                      23937603 0 -  24302211 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 90732 4 +     94391 I
e Macaca_tonkeana.k141_1498238                               26015 0 -     45290 C
e Macaca_thibetana.k99_256239                                 5390 0 -     24072 C
e Macaca_silenus.Contig273                                  329943 0 -    668171 C
e Macaca_siberu.k141_635500                                   7077 0 -     14993 C
e Macaca_radiata.k141_3680011                                 7277 0 +     20474 C
e Macaca_nigra.k141_1655396                                  80276 0 +     89720 C
e Macaca_nemestrina.KQ007038.1                            25458080 0 -  25927173 C
e Macaca_mulatta.NC_041758.1                             186839517 0 + 187317192 C
e Macaca_maura.k141_2733130                                  24428 0 +     37952 C
e Macaca_leonina.k141_3550399                                15863 0 -     29190 C
e Macaca_fuscata.k119_255327                                  6390 0 -     23192 C
e Macaca_fascicularis.k141_814140                            80703 0 -    114318 C
e Macaca_cyclopis.k119_18836                                 12919 0 -     26193 C
e Macaca_assamensis.Contig5                               59676403 0 +  60120075 C
e Macaca_arctoides.k141_2326796                               7144 0 +     40492 C
e Lycaon_pictus.CM007581.1                                17955440 7 -  59628241 I
e Loxodonta_africana.GL010049.1                            4217432 4 -  43346337 I
e Lophocebus_aterrimus.ctg367                              1437328 0 +   1826925 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     6574 7 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3043163 7 +   3914936 I
e Lepilemur_septentrionalis.k141_185316                      27069 0 +     54090 C
e Lepilemur_ruficaudatus.k141_121139                          1671 0 +     25010 C
e Lepilemur_dorsalis.k141_577674                             29133 0 +     45836 C
e Lepilemur_ankaranensis.k141_596936                         11072 0 -     23766 C
e Lemur_catta.scaffold_24                                 15524178 0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    16481 10 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276904 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Indri_indri.k141_3655594                                   22621 5 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7520996 7 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      83223 0 +    135385 C
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  45130 7 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                1000 3 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20662334 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               242436 7 +    327341 I
e Hapalemur_occidentalis.k141_907772                         13663 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                         13826 0 -     41752 C
e Hapalemur_griseus.k141_1511508                             13725 0 +     18253 C
e Hapalemur_gilberti.k141_488810                             12086 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           6937 0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32714 2 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31472 2 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Galeopterus_variegatus.GalVar_scaffold_108840               1293 4 -      9135 I
e Galagoides_demidoff.k141_1711393                            1701 0 +     41679 C
e Fukomys_damarensis.KN121974.1                             850545 0 +   3816255 C
e Felis_nigripes.FelNig_flattened_line_20823                  9654 7 -     36744 I
e Felis_catus_fca126.CM031415.1                           20195910 7 + 205367284 I
e Eulemur_sanfordi.k141_1122526                              13878 0 +    111500 C
e Eulemur_rufus.k141_1476633                                  4305 0 -     17153 C
e Eulemur_rubriventer.k141_774594                              252 0 +     13026 C
e Eulemur_mongoz.k141_232305                                 10761 0 +     97555 C
e Eulemur_macaco.k141_1562045                                12831 0 +     75513 C
e Eulemur_fulvus.k141_544389                                 14069 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                            12834 0 +     26330 C
e Eulemur_coronatus.k141_885031                              15630 8 -     25546 I
e Eulemur_collaris.k141_377015                                6606 0 -     16928 C
e Eulemur_albifrons.k141_342033                              13892 0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erythrocebus_patas.Contig38                             21205379 0 -  21539334 C
e Erinaceus_europaeus.JH835339.1                           3328282 71 -   7059049 I
e Equus_przewalskii.KK951119.1                               33514 8 +    498745 I
e Equus_caballus.CM000403.2                               18531485 8 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1283665 8 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2145833 13 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16329424 7 -  41312741 I
e Ellobius_talpinus.LOJH01081419.1                             523 4 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          20392 4 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1097777 3 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Eidolon_helvum.KE759718.1                                  10639 4 +     11740 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    36511 0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    6163 8 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  673411 8 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8630236 7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Daubentonia_madagascariensis.ctg71                      12537396 0 -  12879189 C
e Dasypus_novemcinctus.JH564415.1                            63648 8 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35877 0 +     51376 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    837190 0 +   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129             28603 7 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_37019               3028 88 -     19598 I
e Cricetulus_griseus.LT883664.1                           11667658 4 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 50299 0 +     63868 C
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          14522 4 -     20389 I
e Condylura_cristata.JH655891.1                           17548142 67 -  53390261 I
e Colobus_polykomos.k141_906115                              37257 0 +     84244 C
e Colobus_guereza.LG01                                   199948975 0 + 200372422 C
e Colobus_angolensis.KN981557.1                            1910723 0 +   2368649 C
e Choloepus_hoffmanni.KN194906.1                            173497 9 +    839153 I
e Choloepus_didactylus.ChoDid_scaffold_45914                 18421 8 +     19366 I
e Chlorocebus_sabaeus.CM001947.1                         135422211 0 + 135778131 C
e Chlorocebus_pygerythrus.k141_1025673                       15211 0 -     50209 C
e Chlorocebus_aethiops.ctg25                              18428774 0 -  18827391 C
e Chinchilla_lanigera.JH722012.1                           1252917 0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           16545 0 +     57038 C
e Cheirogaleus_major.k141_333249                             21180 0 -     52598 C
e Chaetophractus_vellerosus.ChaVel_scaffold_138870             641 8 -      8501 I
e Cercopithecus_roloway.k141_2581234                           837 0 +     14005 C
e Cercopithecus_pogonias.k141_822820                         14790 0 +     17596 C
e Cercopithecus_petaurista.k141_807961                       14814 0 -     27947 C
e Cercopithecus_nictitans.k141_1119862                         265 0 +     13442 C
e Cercopithecus_neglectus.k141_2526306                       40014 0 -     53127 C
e Cercopithecus_mona.ctg39                                21222896 0 -  21565898 C
e Cercopithecus_albogularis.ctg5                                38817204 0 +  39242232 C
e Cercopithecus_lowei.k141_1854285                            3665 0 -     17152 C
e Cercopithecus_hamlyni.k141_187466                          14795 0 -     27936 C
e Cercopithecus_diana.k141_1150327                            6878 0 -     20078 C
e Cercopithecus_cephus.k141_1078548                          12125 0 +     29689 C
e Cercopithecus_ascanius.k141_1024104                         9145 0 -     20310 C
e Cercocebus_torquatus.k141_3057011                           8977 0 +     27781 C
e Cercocebus_lunulatus.k141_3342297                            944 0 -     14043 C
e Cercocebus_chrysogaster.k141_1540778                         287 0 +     17872 C
e Cercocebus_atys.KQ010504.1                               4475783 0 +   4669795 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2587 8 -     25243 I
e Cephalopachus_bancanus.k141_1423433                         5473 0 +     31688 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     93134 7 +    217609 I
e Castor_canadensis.CasCan_scaffold_2074                    137187 0 +    179628 C
e Carollia_perspicillata.CarPer_scaffold_92756                5224 2 -     11696 I
e Carlito_syrichta.NW_007247396.1                           201468 0 +    308752 C
e Capromys_pilorides.CapPil_scaffold_65020                    1166 3 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18500501 7 +  63665305 I
e Canis_lupus_familiaris.chr16                            17958989 218 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9034724 7 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    185338 135 -    185531 T
e CanFam4.chr16                                           17799210 78 -  60362399 I
e Camelus_ferus.KB017975.1                                  403239 7 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2334955 7 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10002497 7 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              54419 13 +     85213 I
e Avahi_laniger.k141_765380                                  53792 18 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  4870 7 +     43469 I
e Arctocebus_calabarensis.k141_2318572                       11570 0 +     14667 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      12720 0 +     20879 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      185462 7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Allochrocebus_solatus.k141_166128                           6122 0 -     12518 C
e Allochrocebus_preussi.k141_1442296                          5270 0 -     18505 C
e Allochrocebus_lhoesti.k141_4309873                         14772 0 -     28001 C
e Allenopithecus_nigroviridis.k141_3361533                   14755 103 -     52922 I
e Allactaga_bullata.AllBul_scaffold_9566                     74603 0 -     89534 C
e Ailurus_fulgens.LNAC01001112.1                             79466 7 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9510690 7 -  29979442 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     70877 18 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           827416 7 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       6816 1 +     62944 g
s Allenopithecus_nigroviridis.k141_3361533                   14858 1 -     52922 g
i Allenopithecus_nigroviridis.k141_3361533               I 103 T 104
s Allochrocebus_lhoesti.k141_4309873                         14772 1 -     28001 g
i Allochrocebus_lhoesti.k141_4309873                     C 0 T 102
s Allochrocebus_preussi.k141_1442296                          5270 1 -     18505 g
i Allochrocebus_preussi.k141_1442296                     C 0 T 104
s Allochrocebus_solatus.k141_166128                           6122 1 -     12518 g
i Allochrocebus_solatus.k141_166128                      C 0 T 102
s Alouatta_belzebul.k141_3560514                              7711 1 +     51355 g
i Alouatta_belzebul.k141_3560514                         I 207 T 207
s Alouatta_caraya.k141_1701091                                 820 1 -     36483 g
i Alouatta_caraya.k141_1701091                           I 202 C 0
s Alouatta_discolor.k141_566626                              11269 1 +     28687 g
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1509701                                25096 1 +     25266 g
i Alouatta_juara.k141_1509701                            I 205 C 0
s Alouatta_macconnelli.k141_918386                             817 1 -      9457 g
i Alouatta_macconnelli.k141_918386                       I 205 C 0
s Alouatta_nigerrima.k141_3472759                            18403 1 -     18578 g
i Alouatta_nigerrima.k141_3472759                        I 205 C 0
s Alouatta_palliata.k141_2135620                              3787 1 +     47717 g
i Alouatta_palliata.k141_2135620                         I 202 C 0
s Alouatta_puruensis.k141_362188                               499 1 +      5663 g
i Alouatta_puruensis.k141_362188                         I 209 C 0
s Alouatta_seniculus.k141_117119                             14951 1 +     50774 g
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  15730 1 -     33861 g
i Aotus_azarae.k141_3104676                              I 203 C 0
s Aotus_griseimembra.k141_2240599                            15774 1 -     34016 g
i Aotus_griseimembra.k141_2240599                        I 227 T 227
s Aotus_nancymaae.KZ198451.1                               4298154 1 -   5030052 g
i Aotus_nancymaae.KZ198451.1                             I 210 C 0
s Aotus_trivirgatus.k141_2152450                             15763 1 -     34685 g
i Aotus_trivirgatus.k141_2152450                         I 219 T 214
s Aotus_vociferans.k141_344750                               28888 1 -     47192 g
i Aotus_vociferans.k141_344750                           I 215 T 215
s Callibella_humilis.k141_1278103                             5550 1 -     10423 g
i Callibella_humilis.k141_1278103                        I 264 T 264
s Callimico_goeldii.k141_1091182                             25019 1 +     31915 g
i Callimico_goeldii.k141_1091182                         I 266 T 266
s Callithrix_geoffroyi.k119_512088                            5248 1 +      5267 g
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590704 1 - 189096842 g
i Callithrix_jacchus.pat_scaffold_3                      I 242 T 242
s Callithrix_kuhlii.k119_1164682                             11993 1 -     12001 G
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Carlito_syrichta.NW_007247396.1                           201468 1 +    308752 g
i Carlito_syrichta.NW_007247396.1                        C 0 I 3
s Cebuella_niveiventris.k141_1251222                         10185 1 -     11392 g
i Cebuella_niveiventris.k141_1251222                     I 278 T 278
s Cebuella_pygmaea.k141_1309012                               6253 1 -      7577 g
i Cebuella_pygmaea.k141_1309012                          I 248 T 248
s Cebus_albifrons.Contig27                                25652918 1 +  26074798 g
i Cebus_albifrons.Contig27                               I 441 T 342
s Cebus_olivaceus.k141_1764483                                 860 1 +     28840 g
i Cebus_olivaceus.k141_1764483                           I 411 T 314
s Cebus_unicolor.k141_1837183                                  585 1 +     14051 g
i Cebus_unicolor.k141_1837183                            I 420 T 313
s Cephalopachus_bancanus.k141_1423433                         5473 1 +     31688 g
i Cephalopachus_bancanus.k141_1423433                    C 0 I 117
s Cercocebus_atys.KQ010504.1                               4475783 1 +   4669795 g
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                         287 1 +     17872 g
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                            944 1 -     14043 g
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           8977 1 +     27781 g
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         9145 1 -     20310 g
i Cercopithecus_ascanius.k141_1024104                    C 0 T 104
s Cercopithecus_cephus.k141_1078548                          12125 1 +     29689 g
i Cercopithecus_cephus.k141_1078548                      C 0 T 105
s Cercopithecus_diana.k141_1150327                            6878 1 -     20078 g
i Cercopithecus_diana.k141_1150327                       C 0 T 104
s Cercopithecus_hamlyni.k141_187466                          14795 1 -     27936 g
i Cercopithecus_hamlyni.k141_187466                      C 0 T 98
s Cercopithecus_lowei.k141_1854285                            3665 1 -     17152 g
i Cercopithecus_lowei.k141_1854285                       C 0 T 104
s Cercopithecus_albogularis.ctg5                                38817204 1 +  39242232 g
i Cercopithecus_albogularis.ctg5                               C 0 T 104
s Cercopithecus_mona.ctg39                                21222896 1 -  21565898 g
i Cercopithecus_mona.ctg39                               C 0 T 104
s Cercopithecus_neglectus.k141_2526306                       40014 1 -     53127 g
i Cercopithecus_neglectus.k141_2526306                   C 0 T 104
s Cercopithecus_nictitans.k141_1119862                         265 1 +     13442 g
i Cercopithecus_nictitans.k141_1119862                   C 0 T 104
s Cercopithecus_petaurista.k141_807961                       14814 1 -     27947 g
i Cercopithecus_petaurista.k141_807961                   C 0 T 104
s Cercopithecus_pogonias.k141_822820                         14790 1 +     17596 g
i Cercopithecus_pogonias.k141_822820                     C 0 T 104
s Cercopithecus_roloway.k141_2581234                           837 1 +     14005 g
i Cercopithecus_roloway.k141_2581234                     C 0 T 104
s Chiropotes_albinasus.k141_2206961                            459 1 -     15524 g
i Chiropotes_albinasus.k141_2206961                      C 0 T 250
s Chlorocebus_aethiops.ctg25                              18428774 1 -  18827391 g
i Chlorocebus_aethiops.ctg25                             C 0 T 104
s Chlorocebus_pygerythrus.k141_1025673                       15211 1 -     50209 g
i Chlorocebus_pygerythrus.k141_1025673                   C 0 T 104
s Chlorocebus_sabaeus.CM001947.1                         135422211 1 + 135778131 g
i Chlorocebus_sabaeus.CM001947.1                         C 0 T 104
s Colobus_angolensis.KN981557.1                            1910723 1 +   2368649 g
i Colobus_angolensis.KN981557.1                          C 0 T 107
s Colobus_guereza.LG01                                   199948975 1 + 200372422 G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37257 1 +     84244 g
i Colobus_polykomos.k141_906115                          C 0 T 107
s Daubentonia_madagascariensis.ctg71                      12537396 1 -  12879189 G
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Erythrocebus_patas.Contig38                             21205379 1 -  21539334 g
i Erythrocebus_patas.Contig38                            C 0 T 102
s Galeopterus_variegatus.GalVar_scaffold_108840               1297 1 -      9135 g
i Galeopterus_variegatus.GalVar_scaffold_108840          I 4 C 0
s Gorilla_beringei.k141_3596273                              16183 1 -     32273 g
i Gorilla_beringei.k141_3596273                          I 112 T 112
s Gorilla_gorilla.LT578341.1                             186338320 1 + 186649187 g
i Gorilla_gorilla.LT578341.1                             I 111 T 111
s Hoolock_leuconedys.ctg274                                    434883 1 +    630532 g
i Hoolock_leuconedys.ctg274                                 C 0 I 99
s Leontocebus_fuscicollis.k141_1820339                        7829 1 +     64341 g
i Leontocebus_fuscicollis.k141_1820339                   I 264 T 264
s Leontocebus_illigeri.k141_3350179                           4888 1 +      4941 g
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        7857 1 +     35603 g
i Leontocebus_nigricollis.k141_4610752                   I 251 T 251
s Leontopithecus_chrysomelas.k141_1519602                    29273 1 +     38576 g
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         25973 1 +     66356 g
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6581 1 -     14121 g
i Lepus_americanus.LepAme_scaffold_107385                I 7 C 0
s Lophocebus_aterrimus.ctg367                              1437328 1 +   1826925 g
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                               7144 1 +     40492 g
i Macaca_arctoides.k141_2326796                          C 0 T 104
s Macaca_assamensis.Contig5                               59676403 1 +  60120075 g
i Macaca_assamensis.Contig5                              C 0 T 104
s Macaca_cyclopis.k119_18836                                 12919 1 -     26193 g
i Macaca_cyclopis.k119_18836                             C 0 T 107
s Macaca_fascicularis.k141_814140                            80703 1 -    114318 g
i Macaca_fascicularis.k141_814140                        C 0 T 107
s Macaca_fuscata.k119_255327                                  6390 1 -     23192 g
i Macaca_fuscata.k119_255327                             C 0 T 103
s Macaca_leonina.k141_3550399                                15863 1 -     29190 g
i Macaca_leonina.k141_3550399                            C 0 T 107
s Macaca_maura.k141_2733130                                  24428 1 +     37952 g
i Macaca_maura.k141_2733130                              C 0 T 107
s Macaca_mulatta.NC_041758.1                             186839517 1 + 187317192 g
i Macaca_mulatta.NC_041758.1                             C 0 T 107
s Macaca_nemestrina.KQ007038.1                            25458080 1 -  25927173 g
i Macaca_nemestrina.KQ007038.1                           C 0 T 107
s Macaca_nigra.k141_1655396                                  80276 1 +     89720 g
i Macaca_nigra.k141_1655396                              C 0 T 107
s Macaca_radiata.k141_3680011                                 7277 1 +     20474 g
i Macaca_radiata.k141_3680011                            C 0 T 107
s Macaca_siberu.k141_635500                                   7077 1 -     14993 g
i Macaca_siberu.k141_635500                              C 0 T 107
s Macaca_silenus.Contig273                                  329943 1 -    668171 g
i Macaca_silenus.Contig273                               C 0 T 107
s Macaca_thibetana.k99_256239                                 5390 1 -     24072 g
i Macaca_thibetana.k99_256239                            C 0 T 104
s Macaca_tonkeana.k141_1498238                               26015 1 -     45290 g
i Macaca_tonkeana.k141_1498238                           C 0 T 107
s Mandrillus_leucophaeus.scaffold280                      23937603 1 -  24302211 g
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               351727 1 +    752769 g
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Mico_argentatus.k141_1239457                                6064 1 -      7380 g
i Mico_argentatus.k141_1239457                           I 242 C 0
s Mico_humeralifer.k141_1976199                               4895 1 +     18990 g
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      6076 1 -      7356 g
i Mico_schneideri.k141_1950671                                 I 242 C 0
s Miopithecus_ogouensis.k141_534055                           9312 1 -     28506 g
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Nasalis_larvatus.k141_413338                               15314 1 +     21681 a
i Nasalis_larvatus.k141_413338                           C 0 T 111
s Ochotona_princeps.JH802162.1                             1363637 1 +   3988456 g
i Ochotona_princeps.JH802162.1                           I 3 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147440 1 + 174332312 g
i Oryctolagus_cuniculus.CM000791.1                       I 3 C 0
s Pan_paniscus.KQ411613.1                                    44271 1 +     80009 g
i Pan_paniscus.KQ411613.1                                I 111 T 111
s Pan_troglodytes.CM009242.2                             189143174 1 + 189151597 g
i Pan_troglodytes.CM009242.2                             I 14 I 3
s Papio_anubis.CM001495.2                                183443405 1 + 183742232 g
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7051 1 +     20448 g
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563863 1 +  20919399 g
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   5795 1 +     41871 g
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     9088 1 +     27711 g
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  9157 1 +      9205 g
i Papio_ursinus.k141_3428135                             C 0 C 0
s Piliocolobus_badius.k141_1234363                           43805 1 +     62158 t
i Piliocolobus_badius.k141_1234363                       C 0 T 107
s Piliocolobus_gordonorum.k141_381342                        38552 1 +     89929 T
i Piliocolobus_gordonorum.k141_381342                    C 0 T 107
s Piliocolobus_kirkii.k141_448987                            39968 1 +     51399 T
i Piliocolobus_kirkii.k141_448987                        C 0 T 107
s Piliocolobus_tephrosceles.PDMG02000141.1                14296206 1 -  14605196 t
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 T 107
s Pongo_abelii.CM009266.2                                189131309 1 + 189387572 g
i Pongo_abelii.CM009266.2                                I 107 T 107
s Pongo_pygmaeus.ctg66                                     9570916 1 +   9816681 g
i Pongo_pygmaeus.ctg66                                   I 106 T 106
s Presbytis_comata.k141_677006                               73490 1 -     81375 a
i Presbytis_comata.k141_677006                           C 0 T 111
s Presbytis_mitrata.k141_1087752                              5310 1 +     19060 a
i Presbytis_mitrata.k141_1087752                         C 0 T 111
s Pygathrix_cinerea.k141_1153803                             15323 1 -     91421 a
i Pygathrix_cinerea.k141_1153803                         C 0 T 111
s Pygathrix_nigripes_b.ctg100                                 7609443 1 +   7812017 a
i Pygathrix_nigripes_b.ctg100                               C 0 T 111
s Pygathrix_nigripes_a.k141_215492                             15295 1 -     72585 a
i Pygathrix_nigripes_a.k141_215492                         C 0 T 111
s Rhinopithecus_bieti.k119_217274                             7006 1 -     11128 a
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236355 1 - 195417433 a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672011 1 +   7961872 a
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_8081                                   445 1 +     42994 g
i Saguinus_bicolor.k141_8081                             I 14 T 225
s Saguinus_imperator.k141_57697                                230 1 +      1030 g
i Saguinus_imperator.k141_57697                          I 14 C 0
s Saguinus_inustus.k141_699149                               13619 1 +     13640 g
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               8488 1 +      8564 g
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469796 1 + 209938924 g
i Saguinus_midas.LG03                                    I 458 C 0
s Saguinus_mystax.k141_374627                                 8431 1 -      9399 g
i Saguinus_mystax.k141_374627                            I 387 T 387
s Saimiri_boliviensis.NW_024100920.1                     119951173 1 - 121099817 g
i Saimiri_boliviensis.NW_024100920.1                     C 0 T 283
s Saimiri_cassiquiarensis.k141_2188234                       23512 1 +     46362 g
i Saimiri_cassiquiarensis.k141_2188234                   C 0 T 166
s Saimiri_macrodon.k141_716185                               23607 1 +     45824 g
i Saimiri_macrodon.k141_716185                           C 0 T 166
s Saimiri_oerstedii.k141_1487881                             40286 1 -     64574 g
i Saimiri_oerstedii.k141_1487881                         C 0 T 217
s Saimiri_sciureus.k141_2278166                               3358 1 -     23631 g
i Saimiri_sciureus.k141_2278166                          C 0 T 283
s Saimiri_ustus.k141_1484609                                 23503 1 -     61129 g
i Saimiri_ustus.k141_1484609                             C 0 T 166
s Sapajus_macrocephalus.k141_351809                          56114 1 -     80660 g
i Sapajus_macrocephalus.k141_351809                      I 371 C 0
s Semnopithecus_entellus.k141_1672505                          187 1 -     12572 A
i Semnopithecus_entellus.k141_1672505                    C 0 I 12
s Semnopithecus_hypoleucos.k141_1615806                      27037 1 +     39453 a
i Semnopithecus_hypoleucos.k141_1615806                  C 0 T 111
s Semnopithecus_johnii.k141_670120                            7555 1 +     27826 a
i Semnopithecus_johnii.k141_670120                       C 0 T 110
s Semnopithecus_priam.k141_638794                             7077 1 -     19483 a
i Semnopithecus_priam.k141_638794                        C 0 T 111
s Semnopithecus_schistaceus.k141_1572284                       378 1 -     12762 A
i Semnopithecus_schistaceus.k141_1572284                 C 0 I 12
s Semnopithecus_vetulus.k141_910252                            239 1 +     13763 a
i Semnopithecus_vetulus.k141_910252                      C 0 I 12
s Tarsius_lariang.k141_2201908                               26475 1 +     70052 g
i Tarsius_lariang.k141_2201908                           C 0 I 108
s Tarsius_wallacei.k141_254427                                1380 1 -     16117 g
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428723 1 + 186847797 g
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                         11128 1 -     20410 a
i Trachypithecus_auratus.k141_722599                     C 0 T 111
s Trachypithecus_crepusculus.k141_582567                       242 1 -     12674 a
i Trachypithecus_crepusculus.k141_582567                 C 0 T 111
s Trachypithecus_cristatus.k141_580354                       11229 1 +     19930 a
i Trachypithecus_cristatus.k141_580354                   C 0 T 111
s Trachypithecus_francoisi.k141_1412647                       7640 1 -     19997 a
i Trachypithecus_francoisi.k141_1412647                  C 0 T 111
s Trachypithecus_geei.k141_277701                            47779 1 -     60166 a
i Trachypithecus_geei.k141_277701                        C 0 T 110
s Trachypithecus_germaini.k141_912491                        15251 1 -     27529 a
i Trachypithecus_germaini.k141_912491                    C 0 T 111
s Trachypithecus_hatinhensis.k141_143409                     15195 1 -     18194 a
i Trachypithecus_hatinhensis.k141_143409                 C 0 T 111
s Trachypithecus_laotum.k141_907409                           8907 1 -     21137 a
i Trachypithecus_laotum.k141_907409                      C 0 T 111
s Trachypithecus_leucocephalus.k141_587342                    7610 1 -     10723 a
i Trachypithecus_leucocephalus.k141_587342               C 0 T 111
s Trachypithecus_melamera.k141_434728                         6782 1 +      9834 a
i Trachypithecus_melamera.k141_434728                    C 0 T 111
s Trachypithecus_obscurus.k141_190785                        25095 1 +     32220 a
i Trachypithecus_obscurus.k141_190785                    C 0 T 111
s Trachypithecus_phayrei.ctg124                            5939197 1 +   6242583 a
i Trachypithecus_phayrei.ctg124                          C 0 T 111
s Trachypithecus_pileatus.k141_2007326                        8448 1 +     20839 a
i Trachypithecus_pileatus.k141_2007326                   C 0 T 110
s Tupaia_chinensis.KB320699.1                              2155694 1 +   4065304 g
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9347 1 -     10553 G
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
e Echinops_telfairi.JH980293.1                            48780689 3 + 111700974 I
e Otolemur_garnettii.GL873799.1                             696396 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         4233 0 +      8798 C
e Galago_senegalensis.k141_631886                             4403 0 +     11339 C
e Galago_moholi.ctg2040                                     426713 0 -    453645 C
e Sapajus_apella.ctg103                                    5420702 76 -   5703754 I
e Mus_pahari.LT608297.1                                   31355110 4 -  89631738 I
e Mus_spretus.CM004101.1                                  90752512 4 - 130317789 I
e Mus_musculus.chr8                                       87650451 4 - 129401213 I
e Mus_caroli.LT608237.1                                   84361453 4 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Loris_tardigradus.ctg83                                  1004782 0 +   6120653 C
e Loris_lydekkerianus.k141_2539221                            5962 0 +     11245 C
e Perodicticus_potto.k141_1092580                             8620 0 +     25941 C
e Perodicticus_ibeanus.k141_855320                           10214 0 +     13100 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      15000 0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5480 7 +     86975 I
e Xerus_inauris.XerIna_scaffold_2302                          1179 7 +    224448 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 10904 7 -     43706 I
e Vicugna_pacos.KN270157.1                                 5371997 7 -   5488506 I
e Varecia_variegata.k141_1128296                             11582 0 +     24756 C
e Varecia_rubra.k141_590885                                  11523 0 +     50397 C
e Ursus_maritimus.KK499267.1                               4850551 7 -   5085361 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   53362 63 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4293354 3 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     81309 7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   6516 8 +      8208 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              105556 0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    387336 7 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      118879 7 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 72732 9 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                10912 12 +     41958 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6810881 7 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629              18439 7 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             30850 6 +     97271 I
e Spermophilus_dauricus.KZ294078.1                         1954051 7 -   3870691 I
e Sorex_araneus.JH798187.1                                13651056 93 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               3814 63 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_42075                      411 4 -     30804 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    153257 71 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                87920 4 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570713 4 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20274423 7 -  38429054 I
e Pteropus_vampyrus.KN534172.1                                6951 4 -      8028 I
e Pteropus_alecto.KB030862.1                              22976898 4 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         40351 7 +     42204 I
e Pteronotus_parnellii.KE909381.1                            15190 7 -     21811 I
e Psammomys_obesus.NESX01036370.1                            10483 4 -     21651 I
e Propithecus_verreauxi.k141_956661                           4904 8 -      6182 I
e Propithecus_tattersalli.k141_790011                        28681 8 -     67325 I
e Propithecus_perrieri.k141_1200571                           4856 8 -     24134 I
e Propithecus_edwardsi.k141_1176054                          26669 8 +     35766 I
e Propithecus_diadema.k141_58108                              1191 8 -     13098 I
e Propithecus_coronatus.k141_347390                          29148 8 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     990836 8 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2596858 0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                 13455 3 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             1871 11 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     28235 0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18194865 4 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12766 7 -     78924 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4721357 7 -   8748460 I
e Panthera_pardus.KV860321.1                                264478 7 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  151269 7 +    230217 I
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       462456 7 -    559221 I
e Orycteropus_afer.OryAfe_flattened_line_144387               9955 3 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80239 4 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   25239 4 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              506767 7 -   2017862 I
e Octodon_degus.JH651603.1                                  746966 0 +  11899542 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761680 0 + 199412804 C
e Nycticebus_coucang.k141_1127096                              250 0 +      2075 C
e Nycticebus_bengalensis.LG01                            102586326 0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9149508 7 -   9404916 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20307617 7 +  31847680 I
e Nannospalax_galili.KL204047.1                            2034174 0 -   3037898 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189371 9 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_281845                          79 9 +      1835 I
e Myotis_lucifugus.GL429869.1                              3903927 12 -   4330536 I
e Myotis_davidii.KB100139.1                                1587835 12 -   6019432 I
e Myotis_brandtii.KE162005.1                                280573 12 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     71356 0 -     80779 C
e Mustela_putorius.JH418006.1                               301574 7 -  14710649 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5056 0 +     14296 C
e Murina_feae.MurFea_scaffold_85699                           6930 12 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   35536 7 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 141735 7 -    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Mirza_zaza.k141_952172                                      9148 0 -     37649 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         6031 7 -      8324 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             34407 11 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1850726 11 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11260571 4 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                15768 4 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    22438 3 -    145209 I
e Microcebus_murinus.CM007674.1                           18291603 0 -  93316391 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182333 4 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 32827 16 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365             10161 7 +     13704 I
e Megaderma_lyra.MegLyr_scaffold_4542                        10443 8 -    207569 I
e Marmota_marmota.CZRN01000018.1                          33103196 7 -  40650429 I
e Manis_pentadactyla.KN006162.1                              50599 7 -    317179 I
e Manis_javanica.JSZB01003497.1                              18609 4 +    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_8222                 90732 4 +     94391 I
e Lycaon_pictus.CM007581.1                                17955440 7 -  59628241 I
e Loxodonta_africana.GL010049.1                            4217432 4 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Leptonychotes_weddellii.KB714746.1                       3043163 7 +   3914936 I
e Lepilemur_septentrionalis.k141_185316                      27069 0 +     54090 C
e Lepilemur_ruficaudatus.k141_121139                          1671 0 +     25010 C
e Lepilemur_dorsalis.k141_577674                             29133 0 +     45836 C
e Lepilemur_ankaranensis.k141_596936                         11072 0 -     23766 C
e Lemur_catta.scaffold_24                                 15524178 0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    16481 10 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276904 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Indri_indri.k141_3655594                                   22621 5 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7520996 7 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      83223 0 +    135385 C
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  45130 7 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                1000 3 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20662334 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               242436 7 +    327341 I
e Hapalemur_occidentalis.k141_907772                         13663 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                         13826 0 -     41752 C
e Hapalemur_griseus.k141_1511508                             13725 0 +     18253 C
e Hapalemur_gilberti.k141_488810                             12086 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           6937 0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32714 2 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31472 2 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Galagoides_demidoff.k141_1711393                            1701 0 +     41679 C
e Fukomys_damarensis.KN121974.1                             850545 0 +   3816255 C
e Felis_nigripes.FelNig_flattened_line_20823                  9654 7 -     36744 I
e Felis_catus_fca126.CM031415.1                           20195910 7 + 205367284 I
e Eulemur_sanfordi.k141_1122526                              13878 0 +    111500 C
e Eulemur_rufus.k141_1476633                                  4305 0 -     17153 C
e Eulemur_rubriventer.k141_774594                              252 0 +     13026 C
e Eulemur_mongoz.k141_232305                                 10761 0 +     97555 C
e Eulemur_macaco.k141_1562045                                12831 0 +     75513 C
e Eulemur_fulvus.k141_544389                                 14069 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                            12834 0 +     26330 C
e Eulemur_coronatus.k141_885031                              15630 8 -     25546 I
e Eulemur_collaris.k141_377015                                6606 0 -     16928 C
e Eulemur_albifrons.k141_342033                              13892 0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3328282 71 -   7059049 I
e Equus_przewalskii.KK951119.1                               33514 8 +    498745 I
e Equus_caballus.CM000403.2                               18531485 8 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1283665 8 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2145833 13 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16329424 7 -  41312741 I
e Ellobius_talpinus.LOJH01081419.1                             523 4 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          20392 4 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1097777 3 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Eidolon_helvum.KE759718.1                                  10639 4 +     11740 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    36511 0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    6163 8 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  673411 8 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8630236 7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            63648 8 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35877 0 +     51376 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    837190 0 +   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129             28603 7 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_37019               3028 88 -     19598 I
e Cricetulus_griseus.LT883664.1                           11667658 4 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 50299 0 +     63868 C
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          14522 4 -     20389 I
e Condylura_cristata.JH655891.1                           17548142 67 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            173497 9 +    839153 I
e Choloepus_didactylus.ChoDid_scaffold_45914                 18421 8 +     19366 I
e Chinchilla_lanigera.JH722012.1                           1252917 0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           16545 0 +     57038 C
e Cheirogaleus_major.k141_333249                             21180 0 -     52598 C
e Chaetophractus_vellerosus.ChaVel_scaffold_138870             641 8 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2587 8 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     93134 7 +    217609 I
e Castor_canadensis.CasCan_scaffold_2074                    137187 0 +    179628 C
e Carollia_perspicillata.CarPer_scaffold_92756                5224 2 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                    1166 3 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18500501 7 +  63665305 I
e Canis_lupus_familiaris.chr16                            17958989 218 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9034724 7 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    185338 135 -    185531 T
e CanFam4.chr16                                           17799210 78 -  60362399 I
e Camelus_ferus.KB017975.1                                  403239 7 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2334955 7 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10002497 7 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              54419 13 +     85213 I
e Avahi_laniger.k141_765380                                  53792 18 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  4870 7 +     43469 I
e Arctocebus_calabarensis.k141_2318572                       11570 0 +     14667 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      12720 0 +     20879 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      185462 7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74603 0 -     89534 C
e Ailurus_fulgens.LNAC01001112.1                             79466 7 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9510690 7 -  29979442 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     70877 18 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           827416 7 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       6817  4 +     62944 g---a-----------------------a--------------g
s Allenopithecus_nigroviridis.k141_3361533                   14755  4 -     52922 g---a-----------------------a--------------g
i Allenopithecus_nigroviridis.k141_3361533               T 104 C 0
s Allochrocebus_lhoesti.k141_4309873                         14671  4 -     28001 g---a-----------------------a--------------g
i Allochrocebus_lhoesti.k141_4309873                     T 102 C 0
s Allochrocebus_preussi.k141_1442296                          5167  4 -     18505 g---a-----------------------a--------------g
i Allochrocebus_preussi.k141_1442296                     T 104 C 0
s Allochrocebus_solatus.k141_166128                           6021  4 -     12518 g---a-----------------------a--------------g
i Allochrocebus_solatus.k141_166128                      T 102 C 0
s Alouatta_belzebul.k141_3560514                              7505  4 +     51355 g---a-----------------------g--------------g
i Alouatta_belzebul.k141_3560514                         T 207 I 207
s Alouatta_caraya.k141_1701091                                 821  4 -     36483 g---a-----------------------g--------------g
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              11270  4 +     28687 g---a-----------------------c--------------a
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1509701                                25097  4 +     25266 g---a-----------------------g--------------g
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_918386                             818  4 -      9457 g---a-----------------------g--------------g
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_3472759                            18404  4 -     18578 g---a-----------------------g--------------g
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              3788  4 +     47717 g---a-----------------------g--------------g
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                               500  4 +      5663 g---a-----------------------g--------------g
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             14952  4 +     50774 g---a-----------------------g--------------g
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  15731  4 -     33861 g---a-----------------------g--------------g
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            15548  4 -     34016 g---a-----------------------a--------------g
i Aotus_griseimembra.k141_2240599                        T 227 C 0
s Aotus_nancymaae.KZ198451.1                               4298155  4 -   5030052 g---a-----------------------g--------------g
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             15550  4 -     34685 g---a-----------------------a--------------g
i Aotus_trivirgatus.k141_2152450                         T 214 C 0
s Aotus_vociferans.k141_344750                               28674  4 -     47192 g---a-----------------------a--------------g
i Aotus_vociferans.k141_344750                           T 215 C 0
s Arctocebus_calabarensis.k141_2318572                       11570  4 +     14667 G---A-----------------------A--------------A
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Callibella_humilis.k141_1278103                             5287  4 -     10423 a---a-----------------------a--------------g
i Callibella_humilis.k141_1278103                        T 264 I 264
s Callimico_goeldii.k141_1091182                             24754  4 +     31915 g---a-----------------------a--------------g
i Callimico_goeldii.k141_1091182                         T 266 I 266
s Callithrix_geoffroyi.k119_512088                            5249  4 +      5267 a---a-----------------------a--------------g
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590463  4 - 189096842 a---a-----------------------a--------------g
i Callithrix_jacchus.pat_scaffold_3                      T 242 I 242
s Callithrix_kuhlii.k119_1164682                             11994  4 -     12001 A---A-----------------------A--------------G
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Carlito_syrichta.NW_007259797.1                           156093  4 -    496798 g---a-----------------------a--------------g
i Carlito_syrichta.NW_007259797.1                        I 15 I 9
s Cebuella_niveiventris.k141_1251222                          9908  4 -     11392 a---a-----------------------a--------------g
i Cebuella_niveiventris.k141_1251222                     T 278 I 278
s Cebuella_pygmaea.k141_1309012                               6006  4 -      7577 a---a-----------------------a--------------g
i Cebuella_pygmaea.k141_1309012                          T 248 I 248
s Cebus_albifrons.Contig27                                25652577  7 +  26074798 aagga-----------------------a--------------g
i Cebus_albifrons.Contig27                               T 342 C 0
s Cebus_olivaceus.k141_1764483                                 547  7 +     28840 aagca-----------------------a--------------g
i Cebus_olivaceus.k141_1764483                           T 314 I 334
s Cebus_unicolor.k141_1837183                                  273  7 +     14051 gaggg-----------------------a--------------g
i Cebus_unicolor.k141_1837183                            T 313 I 333
s Cephalopachus_bancanus.k141_1423433                         5591  4 +     31688 g---a-----------------------a--------------g
i Cephalopachus_bancanus.k141_1423433                    I 117 T 118
s Cercocebus_atys.KQ010504.1                               4475784  8 +   4669795 g---a-----------------------g--g-g-ag------g
i Cercocebus_atys.KQ010504.1                             C 0 T 112
s Cercocebus_chrysogaster.k141_1540778                         288  8 +     17872 g---a-----------------------a--g-g-ag------g
i Cercocebus_chrysogaster.k141_1540778                   C 0 I 8
s Cercocebus_lunulatus.k141_3342297                            945  8 -     14043 g---a-----------------------g--g-g-ag------g
i Cercocebus_lunulatus.k141_3342297                      C 0 T 112
s Cercocebus_torquatus.k141_3057011                           8978  8 +     27781 g---a-----------------------g--g-g-ag------g
i Cercocebus_torquatus.k141_3057011                      C 0 T 109
s Cercopithecus_ascanius.k141_1024104                         9042  4 -     20310 g---a-----------------------a--------------g
i Cercopithecus_ascanius.k141_1024104                    T 104 C 0
s Cercopithecus_cephus.k141_1078548                          12021  4 +     29689 g---a-----------------------a--------------g
i Cercopithecus_cephus.k141_1078548                      T 105 C 0
s Cercopithecus_diana.k141_1150327                            6775  4 -     20078 g---a-----------------------a--------------g
i Cercopithecus_diana.k141_1150327                       T 104 C 0
s Cercopithecus_hamlyni.k141_187466                          14698  4 -     27936 g---a-----------------------a--------------g
i Cercopithecus_hamlyni.k141_187466                      T 98 C 0
s Cercopithecus_lowei.k141_1854285                            3562  4 -     17152 g---a-----------------------a--------------g
i Cercopithecus_lowei.k141_1854285                       T 104 C 0
s Cercopithecus_albogularis.ctg5                                38817101  4 +  39242232 g---a-----------------------a--------------g
i Cercopithecus_albogularis.ctg5                               T 104 C 0
s Cercopithecus_mona.ctg39                                21222793  4 -  21565898 g---a-----------------------a--------------g
i Cercopithecus_mona.ctg39                               T 104 C 0
s Cercopithecus_neglectus.k141_2526306                       39911  4 -     53127 G---a-----------------------a--------------g
i Cercopithecus_neglectus.k141_2526306                   T 104 C 0
s Cercopithecus_nictitans.k141_1119862                         162  4 +     13442 g---a-----------------------a--------------g
i Cercopithecus_nictitans.k141_1119862                   T 104 C 0
s Cercopithecus_petaurista.k141_807961                       14711  4 -     27947 g---a-----------------------a--------------g
i Cercopithecus_petaurista.k141_807961                   T 104 C 0
s Cercopithecus_pogonias.k141_822820                         14687  4 +     17596 g---a-----------------------a--------------g
i Cercopithecus_pogonias.k141_822820                     T 104 C 0
s Cercopithecus_roloway.k141_2581234                           734  4 +     14005 g---a-----------------------a--------------g
i Cercopithecus_roloway.k141_2581234                     T 104 C 0
s Chiropotes_albinasus.k141_2206961                            210 27 -     15524 g---agggagggagggagggagggaggga--------------g
i Chiropotes_albinasus.k141_2206961                      T 250 C 0
s Chlorocebus_aethiops.ctg25                              18428671  4 -  18827391 g---a-----------------------a--------------g
i Chlorocebus_aethiops.ctg25                             T 104 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15108  4 -     50209 g---a-----------------------a--------------g
i Chlorocebus_pygerythrus.k141_1025673                   T 104 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422108  4 + 135778131 g---a-----------------------a--------------g
i Chlorocebus_sabaeus.CM001947.1                         T 104 C 0
s Colobus_angolensis.KN981557.1                            1910617  4 +   2368649 g---a-----------------------a--------------g
i Colobus_angolensis.KN981557.1                          T 107 C 0
s Colobus_guereza.LG01                                   199948976  4 + 200372422 G---A-----------------------G--------------G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37151  4 +     84244 g---a-----------------------a--------------g
i Colobus_polykomos.k141_906115                          T 107 C 0
s Daubentonia_madagascariensis.ctg71                      12537397  4 -  12879189 G---A-----------------------A--------------A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Erythrocebus_patas.Contig38                             21205278  4 -  21539334 g---a-----------------------a--------------g
i Erythrocebus_patas.Contig38                            T 102 C 0
s Galago_moholi.ctg2040                                     426713  4 -    453645 G---A-----------------------A--------------A
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4403  4 +     11339 g---a-----------------------a--------------a
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            1701  4 +     41679 G---A-----------------------A--------------A
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1298  4 -      9135 g---g-----------------------a--------------a
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              16072  4 -     32273 g---a-----------------------a--------------g
i Gorilla_beringei.k141_3596273                          T 112 I 112
s Gorilla_gorilla.LT578341.1                             186338210  4 + 186649187 g---a-----------------------a--------------g
i Gorilla_gorilla.LT578341.1                             T 111 I 111
s Hoolock_leuconedys.ctg274                                    434983  4 +    630532 g---a-----------------------g--------------g
i Hoolock_leuconedys.ctg274                                 I 99 C 0
s Leontocebus_fuscicollis.k141_1820339                        7566  4 +     64341 g---a-----------------------a--------------g
i Leontocebus_fuscicollis.k141_1820339                   T 264 I 264
s Leontocebus_illigeri.k141_3350179                           4889  4 +      4941 g---a-----------------------a--------------g
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        7607  4 +     35603 g---a-----------------------a--------------g
i Leontocebus_nigricollis.k141_4610752                   T 251 I 251
s Leontopithecus_chrysomelas.k141_1519602                    29274  4 +     38576 c---a-----------------------g--------------g
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         25974  4 +     66356 c---a-----------------------g--------------g
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6582  9 -     14121 a---g-----------------------a--g---a--ca-c-a
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437329  8 +   1826925 g---a-----------------------g--g-g-ag------g
i Lophocebus_aterrimus.ctg367                            C 0 T 114
s Loris_lydekkerianus.k141_2539221                            5962  4 +     11245 G---A-----------------------A--------------A
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004782  4 +   6120653 G---A-----------------------A--------------A
i Loris_tardigradus.ctg83                                C 0 C 0
s Macaca_arctoides.k141_2326796                               7041  4 +     40492 g---a-----------------------a--------------g
i Macaca_arctoides.k141_2326796                          T 104 C 0
s Macaca_assamensis.Contig5                               59676300  4 +  60120075 g---a-----------------------a--------------g
i Macaca_assamensis.Contig5                              T 104 C 0
s Macaca_cyclopis.k119_18836                                 12813  4 -     26193 G---A-----------------------A--------------G
i Macaca_cyclopis.k119_18836                             T 107 C 0
s Macaca_fascicularis.k141_814140                            80597  4 -    114318 g---a-----------------------a--------------g
i Macaca_fascicularis.k141_814140                        T 107 C 0
s Macaca_fuscata.k119_255327                                  6288  4 -     23192 g---a-----------------------a--------------g
i Macaca_fuscata.k119_255327                             T 103 C 0
s Macaca_leonina.k141_3550399                                15757  4 -     29190 g---a-----------------------a--------------g
i Macaca_leonina.k141_3550399                            T 107 C 0
s Macaca_maura.k141_2733130                                  24322  4 +     37952 g---a-----------------------a--------------g
i Macaca_maura.k141_2733130                              T 107 C 0
s Macaca_mulatta.NC_041758.1                             186839411  4 + 187317192 g---a-----------------------a--------------g
i Macaca_mulatta.NC_041758.1                             T 107 C 0
s Macaca_nemestrina.KQ007038.1                            25457974  4 -  25927173 g---a-----------------------a--------------g
i Macaca_nemestrina.KQ007038.1                           T 107 C 0
s Macaca_nigra.k141_1655396                                  80170  4 +     89720 g---a-----------------------a--------------g
i Macaca_nigra.k141_1655396                              T 107 C 0
s Macaca_radiata.k141_3680011                                 7171  4 +     20474 g---a-----------------------a--------------g
i Macaca_radiata.k141_3680011                            T 107 C 0
s Macaca_siberu.k141_635500                                   6971  4 -     14993 g---a-----------------------a--------------g
i Macaca_siberu.k141_635500                              T 107 C 0
s Macaca_silenus.Contig273                                  329837  4 -    668171 g---a-----------------------a--------------g
i Macaca_silenus.Contig273                               T 107 C 0
s Macaca_thibetana.k99_256239                                 5287  4 -     24072 g---a-----------------------a--------------g
i Macaca_thibetana.k99_256239                            T 104 C 0
s Macaca_tonkeana.k141_1498238                               25909  4 -     45290 g---a-----------------------a--------------g
i Macaca_tonkeana.k141_1498238                           T 107 C 0
s Mandrillus_leucophaeus.scaffold280                      23937604  8 -  24302211 g---a-----------------------g--g-g-ag------g
i Mandrillus_leucophaeus.scaffold280                     C 0 T 112
s Mandrillus_sphinx.Contig270                               351728  8 +    752769 g---a-----------------------g--g-g-ag------g
i Mandrillus_sphinx.Contig270                            C 0 T 112
s Mico_argentatus.k141_1239457                                6065  4 -      7380 c---a-----------------------g--------------g
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               4896  4 +     18990 a---a-----------------------a--------------g
i Mico_humeralifer.k141_1976199                          C 0 T 81
s Mico_schneideri.k141_1950671                                      6077  4 -      7356 c---a-----------------------g--------------g
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9313  4 -     28506 g---a-----------------------g--------------g
i Miopithecus_ogouensis.k141_534055                      C 0 T 104
s Nasalis_larvatus.k141_413338                               15204  4 +     21681 g---a-----------------------a--------------g
i Nasalis_larvatus.k141_413338                           T 111 C 0
s Nycticebus_bengalensis.LG01                            102586326  4 - 196305487 G---A-----------------------A--------------A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              250  4 +      2075 g---a-----------------------a--------------a
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761680  4 + 199412804 G---A-----------------------A--------------A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1363638 18 +   3988456 a---a-----------------------aaagtggagggagcaa
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147441  9 + 174332312 a---g-----------------------a--g---a--cag--a
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4233  4 +      8798 G---A-----------------------A--------------A
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696396  4 -   1103335 g---a-----------------------a--------------a
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    44161  4 +     80009 g---a-----------------------a--------------g
i Pan_paniscus.KQ411613.1                                T 111 I 111
s Pan_troglodytes.KZ622849.1                                 22363  4 +    110857 g---a-----------------------a--------------g
i Pan_troglodytes.KZ622849.1                             I 1 I 21
s Papio_anubis.CM001495.2                                183443406  8 + 183742232 g---a-----------------------g--g-g-ag------g
i Papio_anubis.CM001495.2                                C 0 T 112
s Papio_cynocephalus.k141_4307930                             7052  8 +     20448 g---a-----------------------g--g-g-ag------g
i Papio_cynocephalus.k141_4307930                        C 0 T 112
s Papio_hamadryas.Contig39                                20563864  8 +  20919399 g---a-----------------------g--g-g-ag------g
i Papio_hamadryas.Contig39                               C 0 T 112
s Papio_kindae.k141_1936966                                   5796  8 +     41871 g---a-----------------------g---tg-ag------g
i Papio_kindae.k141_1936966                              C 0 T 112
s Papio_papio.k141_802527                                     9089  8 +     27711 g---a-----------------------g--g-g-ag------g
i Papio_papio.k141_802527                                C 0 T 112
s Papio_ursinus.k141_3428135                                  9158  8 +      9205 g---a-----------------------g--g-g-ag------g
i Papio_ursinus.k141_3428135                             C 0 T 112
s Perodicticus_ibeanus.k141_855320                           10214  4 +     13100 G---A-----------------------A--------------A
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8620  4 +     25941 G---A-----------------------A--------------A
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Piliocolobus_badius.k141_1234363                           43699  4 +     62158 g---a-----------------------a--------------g
i Piliocolobus_badius.k141_1234363                       T 107 C 0
s Piliocolobus_gordonorum.k141_381342                        38446  4 +     89929 g---a-----------------------a--------------g
i Piliocolobus_gordonorum.k141_381342                    T 107 C 0
s Piliocolobus_kirkii.k141_448987                            39862  4 +     51399 g---a-----------------------a--------------g
i Piliocolobus_kirkii.k141_448987                        T 107 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296100  4 -  14605196 g---a-----------------------a--------------g
i Piliocolobus_tephrosceles.PDMG02000141.1               T 107 C 0
s Pongo_abelii.CM009266.2                                189131203  4 + 189387572 g---a-----------------------a--------------g
i Pongo_abelii.CM009266.2                                T 107 I 107
s Pongo_pygmaeus.ctg66                                     9570811  4 +   9816681 g---a-----------------------a--------------g
i Pongo_pygmaeus.ctg66                                   T 106 I 106
s Presbytis_comata.k141_677006                               73380  4 -     81375 g---a-----------------------a--------------g
i Presbytis_comata.k141_677006                           T 111 C 0
s Presbytis_mitrata.k141_1087752                              5200  4 +     19060 g---a-----------------------a--------------g
i Presbytis_mitrata.k141_1087752                         T 111 C 0
s Pygathrix_cinerea.k141_1153803                             15213  4 -     91421 g---a-----------------------a--------------g
i Pygathrix_cinerea.k141_1153803                         T 111 C 0
s Pygathrix_nigripes_b.ctg100                                 7609333  4 +   7812017 g---a-----------------------a--------------g
i Pygathrix_nigripes_b.ctg100                               T 111 C 0
s Pygathrix_nigripes_a.k141_215492                             15185  4 -     72585 g---a-----------------------a--------------g
i Pygathrix_nigripes_a.k141_215492                         T 111 C 0
s Rhinopithecus_bieti.k119_217274                             7007  4 -     11128 g---a-----------------------g--------------g
i Rhinopithecus_bieti.k119_217274                        C 0 T 109
s Rhinopithecus_roxellana.NC_044550.1                     91236356  4 - 195417433 g---a-----------------------g--------------g
i Rhinopithecus_roxellana.NC_044550.1                    C 0 T 105
s Rhinopithecus_strykeri.ctg102                            7672012  4 +   7961872 g---a-----------------------g--------------g
i Rhinopithecus_strykeri.ctg102                          C 0 T 109
s Saguinus_bicolor.k141_8081                                   221  4 +     42994 g---a-----------------------g--------------g
i Saguinus_bicolor.k141_8081                             T 225 I 225
s Saguinus_imperator.k141_57697                                231  4 +      1030 c---a-----------------------g--------------g
i Saguinus_imperator.k141_57697                          C 0 C 0
s Saguinus_inustus.k141_699149                               13620  4 +     13640 g---a-----------------------a--------------g
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               8489  4 +      8564 g---a-----------------------a--------------g
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469797  4 + 209938924 c---a-----------------------g--------------g
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 8045  4 -      9399 g---a-----------------------a--------------g
i Saguinus_mystax.k141_374627                            T 387 I 387
s Saimiri_boliviensis.NW_024100920.1                     119950891  4 - 121099817 g---a-----------------------a--------------g
i Saimiri_boliviensis.NW_024100920.1                     T 283 I 283
s Saimiri_cassiquiarensis.k141_2188234                       23347  4 +     46362 g---a-----------------------a--------------g
i Saimiri_cassiquiarensis.k141_2188234                   T 166 I 166
s Saimiri_macrodon.k141_716185                               23442  4 +     45824 g---a-----------------------a--------------g
i Saimiri_macrodon.k141_716185                           T 166 I 166
s Saimiri_oerstedii.k141_1487881                             40070  4 -     64574 g---a-----------------------a--------------g
i Saimiri_oerstedii.k141_1487881                         T 217 I 217
s Saimiri_sciureus.k141_2278166                               3076  4 -     23631 g---a-----------------------a--------------g
i Saimiri_sciureus.k141_2278166                          T 283 I 283
s Saimiri_ustus.k141_1484609                                 23338  4 -     61129 g---a-----------------------a--------------g
i Saimiri_ustus.k141_1484609                             T 166 I 166
s Sapajus_apella.ctg103                                    5420778  3 -   5703754 ----a-----------------------a--------------g
i Sapajus_apella.ctg103                                  I 76 C 0
s Sapajus_macrocephalus.k141_351809                          56115  4 -     80660 c---a-----------------------g--------------g
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Semnopithecus_entellus.k141_11662                          19722  4 -     19888 G---A-----------------------A--------------G
i Semnopithecus_entellus.k141_11662                      I 14 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26927  4 +     39453 g---a-----------------------a--------------g
i Semnopithecus_hypoleucos.k141_1615806                  T 111 C 0
s Semnopithecus_johnii.k141_670120                            7446  4 +     27826 g---a-----------------------a--------------g
i Semnopithecus_johnii.k141_670120                       T 110 C 0
s Semnopithecus_priam.k141_638794                             6967  4 -     19483 g---a-----------------------a--------------g
i Semnopithecus_priam.k141_638794                        T 111 C 0
s Semnopithecus_schistaceus.k141_1584426                      7033  4 +      7198 g---a-----------------------a--------------g
i Semnopithecus_schistaceus.k141_1584426                 I 14 C 0
s Semnopithecus_vetulus.k141_1200928                         15293  4 +     15514 g---a-----------------------a--------------g
i Semnopithecus_vetulus.k141_1200928                     I 14 C 0
s Tarsius_lariang.k141_2201908                               26584  4 +     70052 g---a-----------------------a--------------g
i Tarsius_lariang.k141_2201908                           I 108 C 0
s Tarsius_wallacei.k141_254427                                1381  4 -     16117 g---a-----------------------a--------------g
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428724  8 + 186847797 g---a-----------------------g---tg-ag------g
i Theropithecus_gelada.CM009954.1                        C 0 T 112
s Trachypithecus_auratus.k141_722599                         11018  4 -     20410 g---a-----------------------a--------------g
i Trachypithecus_auratus.k141_722599                     T 111 C 0
s Trachypithecus_crepusculus.k141_582567                       132  4 -     12674 g---a-----------------------a--------------g
i Trachypithecus_crepusculus.k141_582567                 T 111 I 119
s Trachypithecus_cristatus.k141_580354                       11119  4 +     19930 g---a-----------------------a--------------g
i Trachypithecus_cristatus.k141_580354                   T 111 C 0
s Trachypithecus_francoisi.k141_1412647                       7530  4 -     19997 g---a-----------------------a--------------g
i Trachypithecus_francoisi.k141_1412647                  T 111 C 0
s Trachypithecus_geei.k141_277701                            47670  4 -     60166 g---a-----------------------a--------------g
i Trachypithecus_geei.k141_277701                        T 110 C 0
s Trachypithecus_germaini.k141_912491                        15141  4 -     27529 g---a-----------------------a--------------g
i Trachypithecus_germaini.k141_912491                    T 111 C 0
s Trachypithecus_hatinhensis.k141_143409                     15085  4 -     18194 g---a-----------------------a--------------g
i Trachypithecus_hatinhensis.k141_143409                 T 111 I 111
s Trachypithecus_laotum.k141_907409                           8797  4 -     21137 g---a-----------------------a--------------g
i Trachypithecus_laotum.k141_907409                      T 111 C 0
s Trachypithecus_leucocephalus.k141_587342                    7500  4 -     10723 g---a-----------------------a--------------g
i Trachypithecus_leucocephalus.k141_587342               T 111 C 0
s Trachypithecus_melamera.k141_434728                         6672  4 +      9834 g---a-----------------------a--------------g
i Trachypithecus_melamera.k141_434728                    T 111 C 0
s Trachypithecus_obscurus.k141_190785                        24985  4 +     32220 g---a-----------------------a--------------g
i Trachypithecus_obscurus.k141_190785                    T 111 C 0
s Trachypithecus_phayrei.ctg124                            5939087  4 +   6242583 g---a-----------------------a--------------g
i Trachypithecus_phayrei.ctg124                          T 111 C 0
s Trachypithecus_pileatus.k141_2007326                        8339  4 +     20839 g---a-----------------------a--------------g
i Trachypithecus_pileatus.k141_2007326                   T 110 C 0
s Tupaia_chinensis.KB320699.1                              2155695  4 +   4065304 g---a-----------------------a--------------a
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9348  4 -     10553 G---A-----------------------A--------------A
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
e Echinops_telfairi.JH980293.1                            48780689  3 + 111700974 I
e Mus_pahari.LT608297.1                                   31355110  4 -  89631738 I
e Mus_spretus.CM004101.1                                  90752512  4 - 130317789 I
e Mus_musculus.chr8                                       87650451  4 - 129401213 I
e Mus_caroli.LT608237.1                                   84361453  4 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      15000  0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5480  7 +     86975 I
e Xerus_inauris.XerIna_scaffold_2302                          1179  7 +    224448 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 10904  7 -     43706 I
e Vicugna_pacos.KN270157.1                                 5371997  7 -   5488506 I
e Varecia_variegata.k141_1128296                             11582  0 +     24756 C
e Varecia_rubra.k141_590885                                  11523  0 +     50397 C
e Ursus_maritimus.KK499267.1                               4850551  7 -   5085361 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   53362 63 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4293354  3 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     81309  7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   6516  8 +      8208 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              105556  0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    387336  7 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      118879  7 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 72732  9 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                10912 12 +     41958 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6810881  7 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629              18439  7 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             30850  6 +     97271 I
e Spermophilus_dauricus.KZ294078.1                         1954051  7 -   3870691 I
e Sorex_araneus.JH798187.1                                13651056 93 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               3814 63 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_42075                      411  4 -     30804 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    153257 71 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                87920  4 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570713  4 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20274423  7 -  38429054 I
e Pteropus_vampyrus.KN534172.1                                6951  4 -      8028 I
e Pteropus_alecto.KB030862.1                              22976898  4 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         40351  7 +     42204 I
e Pteronotus_parnellii.KE909381.1                            15190  7 -     21811 I
e Psammomys_obesus.NESX01036370.1                            10483  4 -     21651 I
e Propithecus_verreauxi.k141_956661                           4904  8 -      6182 I
e Propithecus_tattersalli.k141_790011                        28681  8 -     67325 I
e Propithecus_perrieri.k141_1200571                           4856  8 -     24134 I
e Propithecus_edwardsi.k141_1176054                          26669  8 +     35766 I
e Propithecus_diadema.k141_58108                              1191  8 -     13098 I
e Propithecus_coronatus.k141_347390                          29148  8 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     990836  8 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2596858  0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                 13455  3 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             1871 11 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     28235  0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18194865  4 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12766  7 -     78924 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Panthera_tigris.KE722367.1                               4721357  7 -   8748460 I
e Panthera_pardus.KV860321.1                                264478  7 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  151269  7 +    230217 I
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       462456  7 -    559221 I
e Orycteropus_afer.OryAfe_flattened_line_144387               9955  3 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80239  4 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   25239  4 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              506767  7 -   2017862 I
e Octodon_degus.JH651603.1                                  746966  0 +  11899542 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9149508  7 -   9404916 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20307617  7 +  31847680 I
e Nannospalax_galili.KL204047.1                            2034174  0 -   3037898 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189371  9 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_281845                          79  9 +      1835 I
e Myotis_lucifugus.GL429869.1                              3903927 12 -   4330536 I
e Myotis_davidii.KB100139.1                                1587835 12 -   6019432 I
e Myotis_brandtii.KE162005.1                                280573 12 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     71356  0 -     80779 C
e Mustela_putorius.JH418006.1                               301574  7 -  14710649 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5056  0 +     14296 C
e Murina_feae.MurFea_scaffold_85699                           6930 12 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   35536  7 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 141735  7 -    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Mirza_zaza.k141_952172                                      9148  0 -     37649 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         6031  7 -      8324 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             34407 11 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1850726 11 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11260571  4 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                15768  4 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    22438  3 -    145209 I
e Microcebus_murinus.CM007674.1                           18291603  0 -  93316391 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182333  4 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 32827 16 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365             10161  7 +     13704 I
e Megaderma_lyra.MegLyr_scaffold_4542                        10443  8 -    207569 I
e Marmota_marmota.CZRN01000018.1                          33103196  7 -  40650429 I
e Manis_pentadactyla.KN006162.1                              50599  7 -    317179 I
e Manis_javanica.JSZB01003497.1                              18609  4 +    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_8222                 90732  4 +     94391 I
e Lycaon_pictus.CM007581.1                                17955440  7 -  59628241 I
e Loxodonta_africana.GL010049.1                            4217432  4 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Leptonychotes_weddellii.KB714746.1                       3043163  7 +   3914936 I
e Lepilemur_septentrionalis.k141_185316                      27069  0 +     54090 C
e Lepilemur_ruficaudatus.k141_121139                          1671  0 +     25010 C
e Lepilemur_dorsalis.k141_577674                             29133  0 +     45836 C
e Lepilemur_ankaranensis.k141_596936                         11072  0 -     23766 C
e Lemur_catta.scaffold_24                                 15524178  0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    16481 10 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276904  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Indri_indri.k141_3655594                                   22621  5 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7520996  7 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      83223  0 +    135385 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  45130  7 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                1000  3 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20662334  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               242436  7 +    327341 I
e Hapalemur_occidentalis.k141_907772                         13663  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                         13826  0 -     41752 C
e Hapalemur_griseus.k141_1511508                             13725  0 +     18253 C
e Hapalemur_gilberti.k141_488810                             12086  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           6937  0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32714  2 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31472  2 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             850545  0 +   3816255 C
e Felis_nigripes.FelNig_flattened_line_20823                  9654  7 -     36744 I
e Felis_catus_fca126.CM031415.1                           20195910  7 + 205367284 I
e Eulemur_sanfordi.k141_1122526                              13878  0 +    111500 C
e Eulemur_rufus.k141_1476633                                  4305  0 -     17153 C
e Eulemur_rubriventer.k141_774594                              252  0 +     13026 C
e Eulemur_mongoz.k141_232305                                 10761  0 +     97555 C
e Eulemur_macaco.k141_1562045                                12831  0 +     75513 C
e Eulemur_fulvus.k141_544389                                 14069  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                            12834  0 +     26330 C
e Eulemur_coronatus.k141_885031                              15630  8 -     25546 I
e Eulemur_collaris.k141_377015                                6606  0 -     16928 C
e Eulemur_albifrons.k141_342033                              13892  0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3328282 71 -   7059049 I
e Equus_przewalskii.KK951119.1                               33514  8 +    498745 I
e Equus_caballus.CM000403.2                               18531485  8 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1283665  8 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2145833 13 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16329424  7 -  41312741 I
e Ellobius_talpinus.LOJH01081419.1                             523  4 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          20392  4 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1097777  3 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Eidolon_helvum.KE759718.1                                  10639  4 +     11740 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    36511  0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    6163  8 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  673411  8 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8630236  7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            63648  8 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35877  0 +     51376 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    837190  0 +   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129             28603  7 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_37019               3028 88 -     19598 I
e Cricetulus_griseus.LT883664.1                           11667658  4 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 50299  0 +     63868 C
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          14522  4 -     20389 I
e Condylura_cristata.JH655891.1                           17548142 67 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            173497  9 +    839153 I
e Choloepus_didactylus.ChoDid_scaffold_45914                 18421  8 +     19366 I
e Chinchilla_lanigera.JH722012.1                           1252917  0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           16545  0 +     57038 C
e Cheirogaleus_major.k141_333249                             21180  0 -     52598 C
e Chaetophractus_vellerosus.ChaVel_scaffold_138870             641  8 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2587  8 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     93134  7 +    217609 I
e Castor_canadensis.CasCan_scaffold_2074                    137187  0 +    179628 C
e Carollia_perspicillata.CarPer_scaffold_92756                5224  2 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                    1166  3 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18500501  7 +  63665305 I
e Canis_lupus_familiaris.chr16                            17958989 218 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9034724  7 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    185338 135 -    185531 T
e CanFam4.chr16                                           17799210 78 -  60362399 I
e Camelus_ferus.KB017975.1                                  403239  7 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2334955  7 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10002497  7 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              54419 13 +     85213 I
e Avahi_laniger.k141_765380                                  53792 18 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  4870  7 +     43469 I
e Aplodontia_rufa.AprRuf_scaffold_68852                      12720  0 +     20879 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      185462  7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74603  0 -     89534 C
e Ailurus_fulgens.LNAC01001112.1                             79466  7 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9510690  7 -  29979442 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     70877 18 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           827416  7 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       6821  6 +     62944 g----a-----------a-a----ga
s Acinonyx_jubatus.LLWD01001279.1                           827423  3 -   1699592 g----g-----------a--------
i Acinonyx_jubatus.LLWD01001279.1                        I 7 I 2
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510697  3 -  29979442 c----g-----------a--------
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 7 I 2
s Ailurus_fulgens.LNAC01001112.1                             79473  3 -    347723 g----g-----------a--------
i Ailurus_fulgens.LNAC01001112.1                         I 7 I 2
s Allactaga_bullata.AllBul_scaffold_9566                     74603  2 -     89534 -----C-----------A--------
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 2
s Allenopithecus_nigroviridis.k141_3361533                   14759  6 -     52922 g----a-----------a-g----gg
i Allenopithecus_nigroviridis.k141_3361533               C 0 I 105
s Allochrocebus_lhoesti.k141_4309873                         14675  6 -     28001 g----a-----------a-g----gg
i Allochrocebus_lhoesti.k141_4309873                     C 0 I 104
s Allochrocebus_preussi.k141_1442296                          5171  6 -     18505 g----a-----------a-g----gg
i Allochrocebus_preussi.k141_1442296                     C 0 I 106
s Allochrocebus_solatus.k141_166128                           6025  6 -     12518 g----a-----------a-g----gg
i Allochrocebus_solatus.k141_166128                      C 0 I 104
s Alouatta_belzebul.k141_3560514                              7716  6 +     51355 g----a-----------g-g----ga
i Alouatta_belzebul.k141_3560514                         I 207 T 207
s Alouatta_caraya.k141_1701091                                 825  6 -     36483 g----a-----------g-g----ga
i Alouatta_caraya.k141_1701091                           C 0 T 202
s Alouatta_discolor.k141_566626                              11274  6 +     28687 g----a-----------g-g----ga
i Alouatta_discolor.k141_566626                          C 0 T 196
s Alouatta_juara.k141_1509701                                25101  6 +     25266 g----a-----------g-g----ga
i Alouatta_juara.k141_1509701                            C 0 T 205
s Alouatta_macconnelli.k141_918386                             822  6 -      9457 g----a-----------g-g----ga
i Alouatta_macconnelli.k141_918386                       C 0 T 205
s Alouatta_nigerrima.k141_3472759                            18408  6 -     18578 g----a-----------g-g----ga
i Alouatta_nigerrima.k141_3472759                        C 0 T 205
s Alouatta_palliata.k141_2135620                              3792  6 +     47717 g----a-----------g-g----ga
i Alouatta_palliata.k141_2135620                         C 0 T 202
s Alouatta_puruensis.k141_362188                               504  6 +      5663 g----a-----------g-g----ga
i Alouatta_puruensis.k141_362188                         C 0 T 209
s Alouatta_seniculus.k141_117119                             14956  6 +     50774 g----a-----------g-g----ga
i Alouatta_seniculus.k141_117119                         C 0 T 136
s Anoura_caudifer.AnoCau_scaffold_1412                      185469  3 +    412891 G----A-----------A--------
i Anoura_caudifer.AnoCau_scaffold_1412                   I 7 I 2
s Aotus_azarae.k141_3104676                                  15735  6 -     33861 g----a-----------g-g----aa
i Aotus_azarae.k141_3104676                              C 0 T 207
s Aotus_griseimembra.k141_2240599                            15552  6 -     34016 g----a-----------g-g----ga
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4298159  6 -   5030052 g----a-----------g-g----aa
i Aotus_nancymaae.KZ198451.1                             C 0 T 214
s Aotus_trivirgatus.k141_2152450                             15554  6 -     34685 g----a-----------g-g----ga
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28678  6 -     47192 g----a-----------g-g----ga
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      12720  2 +     20879 -----G-----------G--------
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 2
s Arctocebus_calabarensis.k141_2318572                       11574  3 +     14667 G----G-----------A--------
i Arctocebus_calabarensis.k141_2318572                   C 0 I 2
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4877  3 +     43469 G----A-----------A--------
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 7 I 2
s Callibella_humilis.k141_1278103                             5555  6 -     10423 a----a-----------a-g----ga
i Callibella_humilis.k141_1278103                        I 264 I 13
s Callimico_goeldii.k141_1091182                             25024  6 +     31915 a----a-----------a-g----ga
i Callimico_goeldii.k141_1091182                         I 266 I 13
s Callithrix_geoffroyi.k119_512088                            5253  6 +      5267 a----a-----------a-g----aa
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590709  6 - 189096842 a----a-----------a-g----ga
i Callithrix_jacchus.pat_scaffold_3                      I 242 I 13
s Callithrix_kuhlii.k119_1164682                             11998  3 -     12001 A----A-----------A--------
i Callithrix_kuhlii.k119_1164682                         C 0 T 84
s Camelus_bactrianus.KN276810.1                           10002504  3 -  17673402 g----g-----------a--------
i Camelus_bactrianus.KN276810.1                          I 7 I 8
s Camelus_dromedarius.KN272107.1                           2334962  3 -   7040546 g----g-----------a--------
i Camelus_dromedarius.KN272107.1                         I 7 I 8
s Camelus_ferus.KB017975.1                                  403246  3 -   1652518 g----g-----------a--------
i Camelus_ferus.KB017975.1                               I 7 I 8
s CanFam4.chr16                                           17799288  3 -  60362399 G----G-----------A--------
i CanFam4.chr16                                          I 78 I 2
s Canis_lupus_VD.CanFam_VD_scaffold_27089                       36  3 -     43241 G----G-----------A--------
i Canis_lupus_VD.CanFam_VD_scaffold_27089                n 135 I 2
s Canis_lupus_dingo.QKWQ01000480.1                         9034731  3 -   9314153 g----g-----------a--------
i Canis_lupus_dingo.QKWQ01000480.1                       I 7 I 2
s Canis_lupus_familiaris.chr16                            17959207  3 -  59632846 g----g-----------a--------
i Canis_lupus_familiaris.chr16                           I 218 I 2
s Canis_lupus_orion.HG994398.1                            18500508  3 +  63665305 g----g-----------a--------
i Canis_lupus_orion.HG994398.1                           I 7 I 2
s Capromys_pilorides.CapPil_scaffold_65020                    1169  2 -     12242 -----G-----------G--------
i Capromys_pilorides.CapPil_scaffold_65020               I 3 I 2
s Carlito_syrichta.NW_007247396.1                           201472  6 +    308752 g----a-----------a-g----ga
i Carlito_syrichta.NW_007247396.1                        I 3 T 80
s Carollia_perspicillata.CarPer_scaffold_92756                5226  3 -     11696 G----A-----------A--------
i Carollia_perspicillata.CarPer_scaffold_92756           I 2 I 2
s Castor_canadensis.CasCan_scaffold_2074                    137187  2 +    179628 -----G-----------G--------
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 4
s Catagonus_wagneri.CatWag_scaffold_2839                     93141  2 +    217609 G----G--------------------
i Catagonus_wagneri.CatWag_scaffold_2839                 I 7 I 43
s Cebuella_niveiventris.k141_1251222                         10190  6 -     11392 a----a-----------a-g----ga
i Cebuella_niveiventris.k141_1251222                     I 278 I 13
s Cebuella_pygmaea.k141_1309012                               6258  6 -      7577 a----a-----------a-g----ga
i Cebuella_pygmaea.k141_1309012                          I 248 I 13
s Cebus_albifrons.Contig27                                25652584 17 +  26074798 g----aagggaaggagga-g----ga
i Cebus_albifrons.Contig27                               C 0 I 345
s Cebus_olivaceus.k141_398305                                 1686  6 +      1777 g----a-----------a-g----ga
i Cebus_olivaceus.k141_398305                            I 111 C 0
s Cebus_unicolor.k141_544048                                 50025  6 -     74725 g----a-----------a-g----ga
i Cebus_unicolor.k141_544048                             I 113 C 0
s Cephalopachus_bancanus.k141_1423433                         5477  6 +     31688 g----a-----------a-g----ga
i Cephalopachus_bancanus.k141_1423433                    T 118 I 121
s Ceratotherium_simum.JH767749.1                          12231568  3 +  27778364 g----g-----------a--------
i Ceratotherium_simum.JH767749.1                         I 8 I 2
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2595  3 -     25243 G----G-----------A--------
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 8 I 2
s Cercocebus_atys.KQ010504.1                               4475680  6 +   4669795 g----a-----------a-g----gg
i Cercocebus_atys.KQ010504.1                             T 112 I 114
s Cercocebus_chrysogaster.k141_393940                        14225  6 -     19203 g----a-----------a-g----gg
i Cercocebus_chrysogaster.k141_393940                    I 27 T 77
s Cercocebus_lunulatus.k141_3342297                            841  6 -     14043 g----a-----------a-g----gg
i Cercocebus_lunulatus.k141_3342297                      T 112 I 114
s Cercocebus_torquatus.k141_3057011                           8877  6 +     27781 g----a-----------a-g----gg
i Cercocebus_torquatus.k141_3057011                      T 109 I 111
s Cercopithecus_ascanius.k141_1024104                         9046  6 -     20310 g----a-----------a-g----gg
i Cercopithecus_ascanius.k141_1024104                    C 0 I 106
s Cercopithecus_cephus.k141_1078548                          12025  6 +     29689 g----a-----------a-g----gg
i Cercopithecus_cephus.k141_1078548                      C 0 I 107
s Cercopithecus_diana.k141_1150327                            6779  6 -     20078 g----a-----------a-g----gg
i Cercopithecus_diana.k141_1150327                       C 0 I 106
s Cercopithecus_hamlyni.k141_187466                          14702  6 -     27936 g----a-----------a-g----gg
i Cercopithecus_hamlyni.k141_187466                      C 0 I 100
s Cercopithecus_lowei.k141_1854285                            3566  6 -     17152 g----a-----------a-g----gg
i Cercopithecus_lowei.k141_1854285                       C 0 I 106
s Cercopithecus_albogularis.ctg5                                38817105  6 +  39242232 g----a-----------a-g----gg
i Cercopithecus_albogularis.ctg5                               C 0 I 106
s Cercopithecus_mona.ctg39                                21222797  6 -  21565898 g----a-----------a-g----gg
i Cercopithecus_mona.ctg39                               C 0 I 106
s Cercopithecus_neglectus.k141_2526306                       39915  6 -     53127 g----a-----------a-g----gg
i Cercopithecus_neglectus.k141_2526306                   C 0 I 106
s Cercopithecus_nictitans.k141_1119862                         166  6 +     13442 g----a-----------a-g----gg
i Cercopithecus_nictitans.k141_1119862                   C 0 I 106
s Cercopithecus_petaurista.k141_807961                       14715  6 -     27947 g----a-----------a-g----gg
i Cercopithecus_petaurista.k141_807961                   C 0 I 106
s Cercopithecus_pogonias.k141_822820                         14691  6 +     17596 g----a-----------a-g----gg
i Cercopithecus_pogonias.k141_822820                     C 0 I 106
s Cercopithecus_roloway.k141_2581234                           738  6 +     14005 g----a-----------a-g----gg
i Cercopithecus_roloway.k141_2581234                     C 0 I 106
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             649  3 -      8501 A----A-----------A--------
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       I 8 I 2
s Chinchilla_lanigera.JH722012.1                           1252917  2 +   2543920 -----g-----------c--------
i Chinchilla_lanigera.JH722012.1                         C 0 I 2
s Chiropotes_albinasus.k141_2206961                            237  6 -     15524 g----a-----------a-g----ga
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18428675  6 -  18827391 g----a-----------a-g----gg
i Chlorocebus_aethiops.ctg25                             C 0 I 106
s Chlorocebus_pygerythrus.k141_1025673                       15112  6 -     50209 g----a-----------a-g----gg
i Chlorocebus_pygerythrus.k141_1025673                   C 0 I 106
s Chlorocebus_sabaeus.CM001947.1                         135422112  6 + 135778131 g----a-----------a-g----gg
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 106
s Choloepus_didactylus.ChoDid_scaffold_45914                 18429  3 +     19366 G----A-----------A--------
i Choloepus_didactylus.ChoDid_scaffold_45914             I 8 I 2
s Choloepus_hoffmanni.KN194906.1                            173506  3 +    839153 g----a-----------a--------
i Choloepus_hoffmanni.KN194906.1                         I 9 I 2
s Colobus_angolensis.KN981557.1                            1910621  6 +   2368649 g----a-----------a-g----gg
i Colobus_angolensis.KN981557.1                          C 0 I 109
s Colobus_guereza.LG01                                   199948980  6 + 200372422 G----A-----------G-G----AA
i Colobus_guereza.LG01                                   C 0 I 2
s Colobus_polykomos.k141_906115                              37155  6 +     84244 g----a-----------a-g----gg
i Colobus_polykomos.k141_906115                          C 0 I 109
s Condylura_cristata.JH655891.1                           17548209  3 -  53390261 g----g-----------a--------
i Condylura_cristata.JH655891.1                          I 67 I 2
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14526  4 -     20389 A----G----------AA--------
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 4 I 2
s Cricetomys_gambianus.CriGam_scaffold_18520                 50299  2 +     63868 -----A-----------A--------
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 8
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28610  3 -     87169 G----G-----------A--------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 7 I 2
s Ctenodactylus_gundi.CteGun_scaffold_65                    837190  1 +   1526836 -----------------G--------
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 2
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35877  2 +     51376 -----G-----------G--------
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 2
s Dasypus_novemcinctus.JH564415.1                            63656  3 +   2246927 a----a-----------a--------
i Dasypus_novemcinctus.JH564415.1                        I 8 I 2
s Daubentonia_madagascariensis.ctg71                      12537401  3 -  12879189 G----G-----------A--------
i Daubentonia_madagascariensis.ctg71                     C 0 I 2
s Desmodus_rotundus.KZ672289.1                             8630243  3 +  20541912 g----a-----------c--------
i Desmodus_rotundus.KZ672289.1                           I 7 I 2
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673419  3 +   1390856 G----g-----------a--------
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 8 I 2
s Diceros_bicornis.DicBicMic_scaffold_5955                    6171  3 +    198055 G----G-----------A--------
i Diceros_bicornis.DicBicMic_scaffold_5955               I 8 I 2
s Dinomys_branickii.DinBra_scaffold_21862                    36511  2 +     67921 -----G-----------G--------
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 2
s Echinops_telfairi.JH980293.1                            48780692  1 + 111700974 -----------------a--------
i Echinops_telfairi.JH980293.1                           I 3 I 2
s Eidolon_helvum.KE759718.1                                  10643  4 +     11740 a----ga----------a--------
i Eidolon_helvum.KE759718.1                              I 4 I 2
s Elephantulus_edwardii.JH947257.1                         1097780  1 +  10337057 -----------------a--------
i Elephantulus_edwardii.JH947257.1                       I 3 T 85
s Enhydra_lutris.KZ291758.1                               16329431  3 -  41312741 g----g-----------a--------
i Enhydra_lutris.KZ291758.1                              I 7 I 2
s Eptesicus_fuscus.JH977646.1                              2145846  3 -  14770903 g----g-----------a--------
i Eptesicus_fuscus.JH977646.1                            I 13 I 2
s Equus_asinus.JREZ01000139.1                              1283673  3 +   4378816 g----g-----------a--------
i Equus_asinus.JREZ01000139.1                            I 8 I 2
s Equus_caballus.CM000403.2                               18531493  3 -  39960074 g----g-----------a--------
i Equus_caballus.CM000403.2                              I 8 I 2
s Equus_przewalskii.KK951119.1                               33522  3 +    498745 g----g-----------a--------
i Equus_przewalskii.KK951119.1                           I 8 I 2
s Erinaceus_europaeus.JH835339.1                           3328353  1 -   7059049 a-------------------------
i Erinaceus_europaeus.JH835339.1                         I 71 I 2
s Erythrocebus_patas.Contig38                             21205282  6 -  21539334 g----a-----------a-g----gg
i Erythrocebus_patas.Contig38                            C 0 I 104
s Felis_catus.CM001381.2                                  20237074  3 + 206538554 g----g-----------a--------
i Felis_catus.CM001381.2                                 I 7 I 2
s Felis_catus_fca126.CM031415.1                           20195917  3 + 205367284 g----g-----------a--------
i Felis_catus_fca126.CM031415.1                          I 7 I 2
s Felis_nigripes.FelNig_flattened_line_20823                  9661  3 -     36744 G----G-----------A--------
i Felis_nigripes.FelNig_flattened_line_20823             I 7 I 2
s Fukomys_damarensis.KN121974.1                             850545  2 +   3816255 -----g-----------g--------
i Fukomys_damarensis.KN121974.1                          C 0 I 2
s Galago_moholi.ctg2040                                     426717  3 -    453645 G----G-----------A--------
i Galago_moholi.ctg2040                                  C 0 I 2
s Galago_senegalensis.k141_631886                             4407  3 +     11339 g----g-----------a--------
i Galago_senegalensis.k141_631886                        C 0 I 2
s Galagoides_demidoff.k141_1711393                            1705  3 +     41679 G----G-----------A--------
i Galagoides_demidoff.k141_1711393                       C 0 I 2
s Galeopterus_variegatus.GalVar_scaffold_108840               1302  3 -      9135 g----a-----------g--------
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 I 2
s Gorilla_beringei.k141_3596273                              16188  6 -     32273 g----a-----------g-g----ga
i Gorilla_beringei.k141_3596273                          I 112 I 2
s Gorilla_gorilla.LT578341.1                             186338325  6 + 186649187 g----a-----------g-g----ga
i Gorilla_gorilla.LT578341.1                             I 111 I 2
s Helogale_parvula.HelPar_flattened_line_2585               242443  3 +    327341 G----G-----------A--------
i Helogale_parvula.HelPar_flattened_line_2585            I 7 I 2
s Heterocephalus_glaber.JH602082.1                        20662334  2 +  22651954 -----G-----------G--------
i Heterocephalus_glaber.JH602082.1                       C 0 I 2
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1003  3 +      7595 T----A-----------A--------
i Heterohyrax_brucei.HetBruBak_scaffold_122365           I 3 I 2
s Hoolock_leuconedys.ctg274                                    434987  6 +    630532 g----a-----------g-g----ga
i Hoolock_leuconedys.ctg274                                 C 0 I 2
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45137  3 +     55795 G----G-----------A--------
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 7 I 2
s Hystrix_cristata.HysCri_scaffold_5660                      83223  2 +    135385 -----G-----------G--------
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 2
s Jaculus_jaculus.JH725527.1                               8276904  2 -   9596543 -----C-----------A--------
i Jaculus_jaculus.JH725527.1                             C 0 I 2
s Lasiurus_borealis.LasBor_scaffold_32767                    16491  3 -     42476 G----G-----------A--------
i Lasiurus_borealis.LasBor_scaffold_32767                I 10 I 2
s Leontocebus_fuscicollis.k141_1820339                        7834  6 +     64341 a----a-----------a-g----ga
i Leontocebus_fuscicollis.k141_1820339                   I 264 I 13
s Leontocebus_illigeri.k141_3350179                           4893  6 +      4941 g----a-----------g-g----ga
i Leontocebus_illigeri.k141_3350179                      C 0 T 108
s Leontocebus_nigricollis.k141_4610752                        7862  6 +     35603 a----a-----------a-g----ga
i Leontocebus_nigricollis.k141_4610752                   I 251 I 13
s Leontopithecus_chrysomelas.k141_1519602                    29278  6 +     38576 a----a-----------a-g----ga
i Leontopithecus_chrysomelas.k141_1519602                C 0 I 13
s Leontopithecus_rosalia.k141_464620                         25978  6 +     66356 a----a-----------a-g----ga
i Leontopithecus_rosalia.k141_464620                     C 0 I 13
s Leptonychotes_weddellii.KB714746.1                       3043170  3 +   3914936 g----g-----------a--------
i Leptonychotes_weddellii.KB714746.1                     I 7 I 2
s Lepus_americanus.LepAme_scaffold_107385                     6591  3 -     14121 g----a-----------g--------
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 3
s Lophocebus_aterrimus.ctg367                              1437223  6 +   1826925 g----a-----------a-g----gg
i Lophocebus_aterrimus.ctg367                            T 114 I 116
s Loris_lydekkerianus.k141_2539221                            5966  3 +     11245 G----G-----------A--------
i Loris_lydekkerianus.k141_2539221                       C 0 I 2
s Loris_tardigradus.ctg83                                  1004786  3 +   6120653 G----G-----------A--------
i Loris_tardigradus.ctg83                                C 0 I 2
s Loxodonta_africana.GL010049.1                            4217436  3 -  43346337 a----a-----------a--------
i Loxodonta_africana.GL010049.1                          I 4 I 2
s Lycaon_pictus.CM007581.1                                17955447  3 -  59628241 N----N-----------N--------
i Lycaon_pictus.CM007581.1                               I 7 I 2
s Macaca_arctoides.k141_2326796                               7045  6 +     40492 g----a-----------a-g----gg
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59676304  6 +  60120075 g----a-----------a-g----gg
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 12817  6 -     26193 G----A-----------a-g----gg
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            80601  6 -    114318 g----a-----------a-g----gg
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  6292  6 -     23192 g----a-----------a-g----gg
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                15761  6 -     29190 g----a-----------a-g----gg
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  24326  6 +     37952 g----a-----------a-g----gg
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186839415  6 + 187317192 g----a-----------a-g----gg
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25457978  6 -  25927173 g----a-----------a-g----gg
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  80174  6 +     89720 g----a-----------a-g----gg
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 7175  6 +     20474 g----a-----------a-g----gg
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   6975  6 -     14993 g----a-----------a-g----gg
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  329841  6 -    668171 g----a-----------a-g----gg
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 5291  6 -     24072 g----a-----------a-g----gg
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               25913  6 -     45290 g----a-----------a-g----gg
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90736  4 +     94391 A----G----------AA--------
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 4 I 2
s Mandrillus_leucophaeus.scaffold280                      23937500  6 -  24302211 g----a-----------a-g----gg
i Mandrillus_leucophaeus.scaffold280                     T 112 I 114
s Mandrillus_sphinx.Contig270                               351624  6 +    752769 g----a-----------a-g----gg
i Mandrillus_sphinx.Contig270                            T 112 I 114
s Manis_javanica.JSZB01003497.1                              18613  3 +    737560 g----g-----------a--------
i Manis_javanica.JSZB01003497.1                          I 4 I 2
s Manis_pentadactyla.KN006162.1                              50606  3 -    317179 a----g-----------a--------
i Manis_pentadactyla.KN006162.1                          I 7 I 2
s Megaderma_lyra.MegLyr_scaffold_4542                        10451  4 -    207569 A----G----------GA--------
i Megaderma_lyra.MegLyr_scaffold_4542                    I 8 I 2
s Mellivora_capensis.MelCap_flattened_line_69365             10168  3 +     13704 G----G-----------A--------
i Mellivora_capensis.MelCap_flattened_line_69365         I 7 I 2
s Mico_argentatus.k141_1239457                                6069  6 -      7380 a----a-----------a-g----ga
i Mico_argentatus.k141_1239457                           C 0 I 13
s Mico_humeralifer.k141_2457295                                298  6 +      1079 a----a-----------a-g----ga
i Mico_humeralifer.k141_2457295                          I 19 I 13
s Mico_schneideri.k141_1950671                                      6081  6 -      7356 a----a-----------a-g----ga
i Mico_schneideri.k141_1950671                                 C 0 I 13
s Microgale_talazaci.MicTal_scaffold_6613                    22441  1 -    145209 -----------------A--------
i Microgale_talazaci.MicTal_scaffold_6613                I 3 I 2
s Micronycteris_hirsuta.MicHir_scaffold_52381                15772  1 -     19307 -----------------A--------
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 4 I 2
s Miopithecus_ogouensis.k141_534055                           9213  6 -     28506 g----a-----------a-g----gg
i Miopithecus_ogouensis.k141_534055                      T 104 I 105
s Mirounga_angustirostris.MirAng_flattened_line_93702         6038  3 -      8324 G----G-----------A--------
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 7 I 2
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141742  3 -    366855 G----G-----------A--------
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 7 I 2
s Mungos_mungo.MunMun_flattened_line_23663                   35543  3 +     37127 G----G-----------A--------
i Mungos_mungo.MunMun_flattened_line_23663               I 7 I 2
s Murina_feae.MurFea_scaffold_85699                           6942  3 +     14753 A----G-----------A--------
i Murina_feae.MurFea_scaffold_85699                      I 12 I 2
s Mustela_putorius.JH418006.1                               301581  3 -  14710649 g----g-----------a--------
i Mustela_putorius.JH418006.1                            I 7 I 2
s Myocastor_coypus.MyoCoy_scaffold_10123                     71356  2 -     80779 -----G-----------G--------
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 I 2
s Myotis_brandtii.KE162005.1                                280585  3 -  10118263 g----g-----------a--------
i Myotis_brandtii.KE162005.1                             I 12 I 2
s Myotis_davidii.KB100139.1                                1587847  6 -   6019432 ga-aag-----------a--------
i Myotis_davidii.KB100139.1                              I 12 I 2
s Myotis_lucifugus.GL429869.1                              3903939  3 -   4330536 g----g-----------a--------
i Myotis_lucifugus.GL429869.1                            I 12 I 2
s Myotis_myotis.MyoMyo_scaffold_281845                          88  3 +      1835 G----G-----------A--------
i Myotis_myotis.MyoMyo_scaffold_281845                   I 9 I 2
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189380  3 +    196477 A----A-----------A--------
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 9 I 2
s Nannospalax_galili.KL204047.1                            2034174  2 -   3037898 -----A-----------A--------
i Nannospalax_galili.KL204047.1                          C 0 I 2
s Nasalis_larvatus.k141_413338                               15208  6 +     21681 g----a-----------a-g----gg
i Nasalis_larvatus.k141_413338                           C 0 I 113
s Neomonachus_schauinslandi.NINY01007730.1                20307624  3 +  31847680 g----g-----------a--------
i Neomonachus_schauinslandi.NINY01007730.1               I 7 I 2
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149515  3 -   9404916 g----g-----------a--------
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 7 I 2
s Nycticebus_bengalensis.LG01                            102586330  3 - 196305487 G----G-----------A--------
i Nycticebus_bengalensis.LG01                            C 0 I 2
s Nycticebus_coucang.k141_1127096                              254  3 +      2075 g----g-----------a--------
i Nycticebus_coucang.k141_1127096                        C 0 I 2
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761684  3 + 199412804 G----G-----------A--------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 2
s Ochotona_princeps.JH802162.1                             1363656  3 +   3988456 g----a-----------g--------
i Ochotona_princeps.JH802162.1                           C 0 I 2
s Octodon_degus.JH651603.1                                  746966  2 +  11899542 -----A-----------G--------
i Octodon_degus.JH651603.1                               C 0 I 2
s Orycteropus_afer.OryAfe_flattened_line_144387               9958  1 -     18566 -----------------A--------
i Orycteropus_afer.OryAfe_flattened_line_144387          I 3 I 2
s Oryctolagus_cuniculus.CM000791.1                        67147450  3 + 174332312 g----a-----------g--------
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 4
s Otocyon_megalotis.JAEUCK010005147.1                       462463  3 -    559221 g----g-----------a--------
i Otocyon_megalotis.JAEUCK010005147.1                    I 7 I 2
s Otolemur_crassicaudatus.k141_222918                         4237  3 +      8798 G----G-----------A--------
i Otolemur_crassicaudatus.k141_222918                    C 0 I 2
s Otolemur_garnettii.GL873799.1                             696400  3 -   1103335 g----g-----------a--------
i Otolemur_garnettii.GL873799.1                          C 0 I 2
s Pan_paniscus.KQ411613.1                                    44276  6 +     80009 g----a-----------g-g----ga
i Pan_paniscus.KQ411613.1                                I 111 I 2
s Pan_troglodytes.CM009242.2                             189143178  6 + 189151597 g----a-----------g-g----ga
i Pan_troglodytes.CM009242.2                             I 3 I 2
s Panthera_onca.PanOnc_flattened_line_3271                  151276  3 +    230217 G----G-----------A--------
i Panthera_onca.PanOnc_flattened_line_3271               I 7 I 2
s Panthera_pardus.KV860321.1                                264485  3 +  18783137 g----g-----------a--------
i Panthera_pardus.KV860321.1                             I 7 I 2
s Panthera_tigris.KE722367.1                               4721364  3 -   8748460 g----g-----------a--------
i Panthera_tigris.KE722367.1                             I 7 I 2
s Papio_anubis.CM001495.2                                183443302  6 + 183742232 g----a-----------a-g----gg
i Papio_anubis.CM001495.2                                T 112 I 114
s Papio_cynocephalus.k141_4307930                             6948  6 +     20448 g----a-----------a-g----gg
i Papio_cynocephalus.k141_4307930                        T 112 I 114
s Papio_hamadryas.Contig39                                20563760  6 +  20919399 g----a-----------a-g----gg
i Papio_hamadryas.Contig39                               T 112 I 114
s Papio_kindae.k141_1936966                                   5692  6 +     41871 g----a-----------a-g----gg
i Papio_kindae.k141_1936966                              T 112 I 114
s Papio_papio.k141_802527                                     8985  6 +     27711 g----a-----------a-g----gg
i Papio_papio.k141_802527                                T 112 I 114
s Papio_ursinus.k141_3428135                                  9054  6 +      9205 g----a-----------a-g----gg
i Papio_ursinus.k141_3428135                             T 112 I 114
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12773  3 -     78924 G----G-----------A--------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 7 I 2
s Perodicticus_ibeanus.k141_855320                           10218  3 +     13100 G----G-----------A--------
i Perodicticus_ibeanus.k141_855320                       C 0 I 2
s Perodicticus_potto.k141_1092580                             8624  3 +     25941 G----G-----------A--------
i Perodicticus_potto.k141_1092580                        C 0 I 2
s Petromus_typicus.PetTyp_scaffold_42190                     28235  2 -     29689 -----A-----------G--------
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 I 2
s Piliocolobus_badius.k141_1234363                           43703  6 +     62158 g----a-----------a-g----gg
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        38450  6 +     89929 g----a-----------a-g----gg
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            39866  6 +     51399 g----a-----------a-g----gg
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296104  6 -  14605196 g----a-----------a-g----gg
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1882  3 +     22620 G----G-----------A--------
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 11 I 2
s Pongo_abelii.CM009266.2                                189131314  6 + 189387572 g----a-----------a-g----ga
i Pongo_abelii.CM009266.2                                I 107 I 2
s Pongo_pygmaeus.ctg66                                     9570921  6 +   9816681 g----a-----------a-g----ga
i Pongo_pygmaeus.ctg66                                   I 106 I 2
s Presbytis_comata.k141_677006                               73384  6 -     81375 g----a-----------a-g----gg
i Presbytis_comata.k141_677006                           C 0 I 113
s Presbytis_mitrata.k141_1087752                              5204  6 +     19060 g----a-----------a-g----gg
i Presbytis_mitrata.k141_1087752                         C 0 I 113
s Procavia_capensis.ProCapCap_scaffold_85530                 13458  3 -     22811 T----A-----------A--------
i Procavia_capensis.ProCapCap_scaffold_85530             I 3 I 2
s Pteronotus_parnellii.KE909381.1                            15197  3 -     21811 a----g-----------a--------
i Pteronotus_parnellii.KE909381.1                        I 7 I 2
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40358  3 +     42204 G----G-----------A--------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 7 I 2
s Pteropus_alecto.KB030862.1                              22976902  4 +  28871421 a----ga----------a--------
i Pteropus_alecto.KB030862.1                             I 4 I 2
s Pteropus_vampyrus.KN534172.1                                6955  4 -      8028 a----ga----------a--------
i Pteropus_vampyrus.KN534172.1                           I 4 I 2
s Puma_concolor.QAVW01001104.1                            20274430  3 -  38429054 g----g-----------a--------
i Puma_concolor.QAVW01001104.1                           I 7 I 2
s Pygathrix_cinerea.k141_1153803                             15217  6 -     91421 g----a-----------a-g----gg
i Pygathrix_cinerea.k141_1153803                         C 0 I 113
s Pygathrix_nigripes_b.ctg100                                 7609337  6 +   7812017 g----a-----------a-g----gg
i Pygathrix_nigripes_b.ctg100                               C 0 I 113
s Pygathrix_nigripes_a.k141_215492                             15189  6 -     72585 g----a-----------a-g----gg
i Pygathrix_nigripes_a.k141_215492                         C 0 I 113
s Rhinopithecus_bieti.k119_217274                             6902  6 -     11128 g----a-----------a-g----gg
i Rhinopithecus_bieti.k119_217274                        T 109 I 111
s Rhinopithecus_roxellana.NC_044550.1                     91236255  6 - 195417433 g----a-----------a-g----gg
i Rhinopithecus_roxellana.NC_044550.1                    T 105 I 107
s Rhinopithecus_strykeri.ctg102                            7671907  6 +   7961872 g----a-----------a-g----gg
i Rhinopithecus_strykeri.ctg102                          T 109 I 111
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87924  4 -     96226 A----G----------AA--------
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 4 I 2
s Saguinus_bicolor.k141_8081                                   450  6 +     42994 a----a-----------a-g----ga
i Saguinus_bicolor.k141_8081                             I 225 I 13
s Saguinus_imperator.k141_57697                                235  6 +      1030 a----a-----------a-g----ga
i Saguinus_imperator.k141_57697                          C 0 I 13
s Saguinus_inustus.k141_699149                               13624  6 +     13640 g----a-----------g-g----ga
i Saguinus_inustus.k141_699149                           C 0 T 108
s Saguinus_labiatus.k141_285685                               8493  6 +      8564 g----a-----------a-g----ga
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469801  6 + 209938924 a----a-----------a-g----ga
i Saguinus_midas.LG03                                    C 0 I 13
s Saguinus_mystax.k141_374627                                 8436  6 -      9399 a----a-----------a-g----ga
i Saguinus_mystax.k141_374627                            I 387 I 13
s Saimiri_boliviensis.NW_024100920.1                     119951178  6 - 121099817 a----a-----------a-g----ga
i Saimiri_boliviensis.NW_024100920.1                     I 283 I 9
s Saimiri_cassiquiarensis.k141_2188234                       23517  6 +     46362 a----a-----------a-g----ga
i Saimiri_cassiquiarensis.k141_2188234                   I 166 I 9
s Saimiri_macrodon.k141_716185                               23612  6 +     45824 a----a-----------a-g----ga
i Saimiri_macrodon.k141_716185                           I 166 I 9
s Saimiri_oerstedii.k141_1487881                             40291  6 -     64574 a----a-----------a-g----ga
i Saimiri_oerstedii.k141_1487881                         I 217 I 9
s Saimiri_sciureus.k141_2278166                               3363  6 -     23631 a----a-----------a-g----ga
i Saimiri_sciureus.k141_2278166                          I 283 I 9
s Saimiri_ustus.k141_1484609                                 23508  6 -     61129 a----a-----------a-g----ga
i Saimiri_ustus.k141_1484609                             I 166 I 9
s Sapajus_apella.ctg103                                    5420781  4 -   5703754 g----a-----------a-g------
i Sapajus_apella.ctg103                                  C 0 I 116
s Sapajus_macrocephalus.k141_351809                          56119 10 -     80660 a----a-----------a-ggagcga
i Sapajus_macrocephalus.k141_351809                      C 0 I 13
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153328  3 -    313613 G----A-----------A--------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 71 I 2
s Semnopithecus_entellus.k141_11662                          19726  7 -     19888 G----A-----------AGG----GA
i Semnopithecus_entellus.k141_11662                      C 0 T 84
s Semnopithecus_hypoleucos.k141_1615806                      26931  7 +     39453 g----a-----------agg----ga
i Semnopithecus_hypoleucos.k141_1615806                  C 0 I 112
s Semnopithecus_johnii.k141_670120                            7450  7 +     27826 g----a-----------agg----ga
i Semnopithecus_johnii.k141_670120                       C 0 I 111
s Semnopithecus_priam.k141_638794                             6971  7 -     19483 g----a-----------agg----ga
i Semnopithecus_priam.k141_638794                        C 0 I 112
s Semnopithecus_schistaceus.k141_1584426                      7037  7 +      7198 g----a-----------agg----ga
i Semnopithecus_schistaceus.k141_1584426                 C 0 T 84
s Semnopithecus_vetulus.k141_1200928                         15297  7 +     15514 g----a-----------agg----ga
i Semnopithecus_vetulus.k141_1200928                     C 0 T 86
s Solenodon_paradoxus.SolPar_flattened_line_126               3877  3 +   1910179 A----G-----------A--------
i Solenodon_paradoxus.SolPar_flattened_line_126          I 63 I 2
s Spilogale_gracilis.SpiGra_flattened_line_13525             30856  3 +     97271 G----G-----------A--------
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 6 I 2
s Suricata_suricatta.SurSur_flattened_line_6629              18446  3 -    196729 G----G-----------A--------
i Suricata_suricatta.SurSur_flattened_line_6629          I 7 I 2
s Sus_scrofa.CM000828.4                                    6810888  3 +  69701581 g----g-----------a--------
i Sus_scrofa.CM000828.4                                  I 7 I 43
s Tadarida_brasiliensis.TadBra_scaffold_25820                10924  3 +     41958 G----G-----------G--------
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 12 I 2
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72741  3 +    116680 A----A-----------A--------
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 9 I 2
s Tapirus_indicus.TapInd_scaffold_9301                      118886  3 -    156842 G----G-----------G--------
i Tapirus_indicus.TapInd_scaffold_9301                   I 7 I 2
s Tapirus_terrestris.TapTer_scaffold_755                    387343  3 +    539355 G----G-----------A--------
i Tapirus_terrestris.TapTer_scaffold_755                 I 7 I 2
s Tarsius_lariang.k141_2201908                               26588  6 +     70052 g----a-----------g-a----ga
i Tarsius_lariang.k141_2201908                           C 0 T 106
s Tarsius_wallacei.k141_254427                                1385  6 -     16117 g----a-----------g-a----Ga
i Tarsius_wallacei.k141_254427                           C 0 T 106
s Theropithecus_gelada.CM009954.1                        186428620  6 + 186847797 g----a-----------a-g----gg
i Theropithecus_gelada.CM009954.1                        T 112 I 114
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105556  2 +    114563 -----G-----------G--------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 2
s Tolypeutes_matacus.TolMat_scaffold_228639                   6524  4 +      8208 A----A----------AA--------
i Tolypeutes_matacus.TolMat_scaffold_228639              I 8 I 2
s Tonatia_saurophila.TonSau_scaffold_294                     81316  3 +    610378 G----A-----------A--------
i Tonatia_saurophila.TonSau_scaffold_294                 I 7 I 2
s Trachypithecus_auratus.k141_722599                         11022  6 -     20410 g----a-----------a-g----gg
i Trachypithecus_auratus.k141_722599                     C 0 I 113
s Trachypithecus_crepusculus.k141_479585                       136  6 -     15813 g----a-----------a-g----ga
i Trachypithecus_crepusculus.k141_479585                 n 119 T 7
s Trachypithecus_cristatus.k141_580354                       11123  6 +     19930 g----a-----------a-g----gg
i Trachypithecus_cristatus.k141_580354                   C 0 I 113
s Trachypithecus_francoisi.k141_1412647                       7534  6 -     19997 g----a-----------a-g----gg
i Trachypithecus_francoisi.k141_1412647                  C 0 I 113
s Trachypithecus_geei.k141_277701                            47674  6 -     60166 g----a-----------a-g----gg
i Trachypithecus_geei.k141_277701                        C 0 I 112
s Trachypithecus_germaini.k141_912491                        15145  6 -     27529 g----a-----------a-g----gg
i Trachypithecus_germaini.k141_912491                    C 0 I 113
s Trachypithecus_hatinhensis.k141_143409                     15200  6 -     18194 g----a-----------g-g----aa
i Trachypithecus_hatinhensis.k141_143409                 I 111 I 2
s Trachypithecus_laotum.k141_907409                           8801  6 -     21137 g----a-----------a-g----gg
i Trachypithecus_laotum.k141_907409                      C 0 I 113
s Trachypithecus_leucocephalus.k141_587342                    7504  6 -     10723 g----a-----------a-g----gg
i Trachypithecus_leucocephalus.k141_587342               C 0 I 113
s Trachypithecus_melamera.k141_434728                         6676  6 +      9834 g----a-----------a-g----gg
i Trachypithecus_melamera.k141_434728                    C 0 I 113
s Trachypithecus_obscurus.k141_190785                        24989  6 +     32220 g----a-----------a-g----gg
i Trachypithecus_obscurus.k141_190785                    C 0 I 113
s Trachypithecus_phayrei.ctg124                            5939091  6 +   6242583 g----a-----------a-g----gg
i Trachypithecus_phayrei.ctg124                          C 0 I 113
s Trachypithecus_pileatus.k141_2007326                        8343  6 +     20839 g----a-----------a-g----gg
i Trachypithecus_pileatus.k141_2007326                   C 0 I 112
s Trichechus_manatus.JH594705.1                            4293357  3 +  10818551 a----a-----------a--------
i Trichechus_manatus.JH594705.1                          I 3 I 2
s Tupaia_chinensis.KB320699.1                              2155699  3 +   4065304 g----g-----------g--------
i Tupaia_chinensis.KB320699.1                            C 0 I 2
s Tupaia_tana.TupTan_flattened_line_97126                     9352  3 -     10553 G----G-----------A--------
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 2
s Uropsilus_gracilis.UroGra_scaffold_12083                   53425  3 -     77625 A----T-----------A--------
i Uropsilus_gracilis.UroGra_scaffold_12083               I 63 I 2
s Ursus_maritimus.KK499267.1                               4850558  3 -   5085361 g----g-----------a--------
i Ursus_maritimus.KK499267.1                             I 7 I 2
s Vicugna_pacos.KN270157.1                                 5372004  3 -   5488506 g----g-----------a--------
i Vicugna_pacos.KN270157.1                               I 7 I 8
s Vulpes_lagopus.VulLag_flattened_line_30954                 10911  3 -     43706 G----G-----------A--------
i Vulpes_lagopus.VulLag_flattened_line_30954             I 7 I 2
s Zalophus_californianus.ZalCal_flattened_line_17732          5487  3 +     86975 g----g-----------a--------
i Zalophus_californianus.ZalCal_flattened_line_17732     I 7 I 2
s Zapus_hudsonius.ZapHud_scaffold_11398                      15000  2 +     63895 -----C-----------A--------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 2
e Mus_pahari.LT608297.1                                   31355110  4 -  89631738 I
e Mus_spretus.CM004101.1                                  90752512  4 - 130317789 I
e Mus_musculus.chr8                                       87650451  4 - 129401213 I
e Mus_caroli.LT608237.1                                   84361453  4 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Xerus_inauris.XerIna_scaffold_2302                          1179  7 +    224448 I
e Varecia_variegata.k141_1128296                             11582  0 +     24756 C
e Varecia_rubra.k141_590885                                  11523  0 +     50397 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spermophilus_dauricus.KZ294078.1                         1954051  7 -   3870691 I
e Sorex_araneus.JH798187.1                                13651056 93 -  18376816 I
e Sigmodon_hispidus.SigHis_scaffold_42075                      411  4 -     30804 I
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570713  4 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Psammomys_obesus.NESX01036370.1                            10483  4 -     21651 I
e Propithecus_verreauxi.k141_956661                           4904  8 -      6182 I
e Propithecus_tattersalli.k141_790011                        28681  8 -     67325 I
e Propithecus_perrieri.k141_1200571                           4856  8 -     24134 I
e Propithecus_edwardsi.k141_1176054                          26669  8 +     35766 I
e Propithecus_diadema.k141_58108                              1191  8 -     13098 I
e Propithecus_coronatus.k141_347390                          29148  8 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     990836  8 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2596858  0 -   4620579 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Peromyscus_maniculatus.KI615324.1                       18194865  4 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80239  4 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   25239  4 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              506767  7 -   2017862 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              5056  0 +     14296 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Mirza_zaza.k141_952172                                      9148  0 -     37649 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             34407 11 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1850726 11 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11260571  4 -  27267610 I
e Microcebus_murinus.CM007674.1                           18291603  0 -  93316391 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182333  4 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 32827 16 +    140813 I
e Marmota_marmota.CZRN01000018.1                          33103196  7 -  40650429 I
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lepilemur_septentrionalis.k141_185316                      27069  0 +     54090 C
e Lepilemur_ruficaudatus.k141_121139                          1671  0 +     25010 C
e Lepilemur_dorsalis.k141_577674                             29133  0 +     45836 C
e Lepilemur_ankaranensis.k141_596936                         11072  0 -     23766 C
e Lemur_catta.scaffold_24                                 15524178  0 -  30322482 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Indri_indri.k141_3655594                                   22621  5 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7520996  7 -   7955117 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Hapalemur_occidentalis.k141_907772                         13663  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                         13826  0 -     41752 C
e Hapalemur_griseus.k141_1511508                             13725  0 +     18253 C
e Hapalemur_gilberti.k141_488810                             12086  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           6937  0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32714  2 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31472  2 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Eulemur_sanfordi.k141_1122526                              13878  0 +    111500 C
e Eulemur_rufus.k141_1476633                                  4305  0 -     17153 C
e Eulemur_rubriventer.k141_774594                              252  0 +     13026 C
e Eulemur_mongoz.k141_232305                                 10761  0 +     97555 C
e Eulemur_macaco.k141_1562045                                12831  0 +     75513 C
e Eulemur_fulvus.k141_544389                                 14069  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                            12834  0 +     26330 C
e Eulemur_coronatus.k141_885031                              15630  8 -     25546 I
e Eulemur_collaris.k141_377015                                6606  0 -     16928 C
e Eulemur_albifrons.k141_342033                              13892  0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Ellobius_talpinus.LOJH01081419.1                             523  4 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          20392  4 -    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Crocidura_indochinensis.CroInd_scaffold_37019               3028 88 -     19598 I
e Cricetulus_griseus.LT883664.1                           11667658  4 + 224834208 I
e Cheirogaleus_medius.k141_1055463                           16545  0 +     57038 C
e Cheirogaleus_major.k141_333249                             21180  0 -     52598 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              54419 13 +     85213 I
e Avahi_laniger.k141_765380                                  53792 18 -     92717 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     70877 18 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       6827  4 +     62944 a-------------g-gg
s Acinonyx_jubatus.LLWD01001279.1                           827428  4 -   1699592 g-------------a-ca
i Acinonyx_jubatus.LLWD01001279.1                        I 2 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     70895  4 +     87051 A-------------G-CT
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 18 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510702  4 -  29979442 g-------------a-ca
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 2 C 0
s Ailurus_fulgens.LNAC01001112.1                             79478  4 -    347723 g-------------a-ta
i Ailurus_fulgens.LNAC01001112.1                         I 2 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     74607  4 -     89534 A-------------A-TT
i Allactaga_bullata.AllBul_scaffold_9566                 I 2 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14870  5 -     52922 a-------------aatc
i Allenopithecus_nigroviridis.k141_3361533               I 105 C 0
s Allochrocebus_lhoesti.k141_4309873                         14785  5 -     28001 a-------------aatc
i Allochrocebus_lhoesti.k141_4309873                     I 104 C 0
s Allochrocebus_preussi.k141_1442296                          5283  5 -     18505 a-------------aatc
i Allochrocebus_preussi.k141_1442296                     I 106 C 0
s Allochrocebus_solatus.k141_166128                           6135  5 -     12518 a-------------aatc
i Allochrocebus_solatus.k141_166128                      I 104 C 0
s Alouatta_belzebul.k141_3560514                              7515  4 +     51355 g-------------g-ga
i Alouatta_belzebul.k141_3560514                         T 207 C 0
s Alouatta_caraya.k141_1701091                                 629  4 -     36483 a-------------a-aa
i Alouatta_caraya.k141_1701091                           T 202 C 0
s Alouatta_juara.k141_1509701                                24902  4 +     25266 a-------------a-aa
i Alouatta_juara.k141_1509701                            T 205 C 0
s Alouatta_macconnelli.k141_918386                             623  4 -      9457 a-------------a-aa
i Alouatta_macconnelli.k141_918386                       T 205 C 0
s Alouatta_nigerrima.k141_3472759                            18209  4 -     18578 a-------------a-aa
i Alouatta_nigerrima.k141_3472759                        T 205 C 0
s Alouatta_palliata.k141_2135620                              3596  4 +     47717 g-------------g-ga
i Alouatta_palliata.k141_2135620                         T 202 C 0
s Alouatta_puruensis.k141_362188                               301  4 +      5663 a-------------a-aa
i Alouatta_puruensis.k141_362188                         T 209 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185474  4 +    412891 G-------------A-CG
i Anoura_caudifer.AnoCau_scaffold_1412                   I 2 C 0
s Aotus_azarae.k141_3104676                                  15534  1 -     33861 g-----------------
i Aotus_azarae.k141_3104676                              T 207 C 0
s Aotus_griseimembra.k141_2240599                            15558  4 -     34016 g-------------g-ga
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297951  4 -   5030052 g-------------g-ga
i Aotus_nancymaae.KZ198451.1                             T 214 C 0
s Aotus_trivirgatus.k141_2152450                             15560  4 -     34685 g-------------g-ga
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28684  4 -     47192 g-------------g-ga
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      12724  6 +     20879 A-----------GAA-CT
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 2 C 0
s Arctocebus_calabarensis.k141_2318572                       11579  4 +     14667 G-------------A-CA
i Arctocebus_calabarensis.k141_2318572                   I 2 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4882  4 +     43469 G-------------A-CA
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 2 C 0
s Avahi_laniger.k141_765380                                  53810  3 -     92717 --------------A-CA
i Avahi_laniger.k141_765380                              I 18 C 0
s Avahi_peyrierasi.k141_1424874                              54432  3 +     85213 --------------A-CA
i Avahi_peyrierasi.k141_1424874                          I 13 C 0
s Callibella_humilis.k141_1278103                             5574  4 -     10423 a-------------a-tc
i Callibella_humilis.k141_1278103                        I 13 C 0
s Callimico_goeldii.k141_1091182                             25043  4 +     31915 A-------------A-TC
i Callimico_goeldii.k141_1091182                         I 13 C 0
s Callithrix_geoffroyi.k119_512088                            5259  4 +      5267 g-------------g-aa
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590728  4 - 189096842 a-------------a-tc
i Callithrix_jacchus.pat_scaffold_3                      I 13 C 0
s Callithrix_kuhlii.k119_1168854                               127  4 -     12329 A-------------A-TC
i Callithrix_kuhlii.k119_1168854                         n 84 C 0
s Camelus_bactrianus.KN276810.1                           10002515  4 -  17673402 g-------------a-ca
i Camelus_bactrianus.KN276810.1                          I 8 C 0
s Camelus_dromedarius.KN272107.1                           2334973  4 -   7040546 g-------------a-ca
i Camelus_dromedarius.KN272107.1                         I 8 C 0
s Camelus_ferus.KB017975.1                                  403257  4 -   1652518 g-------------a-ca
i Camelus_ferus.KB017975.1                               I 8 C 0
s CanFam4.chr16                                           17799293  4 -  60362399 G-------------A-CA
i CanFam4.chr16                                          I 2 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                       41  4 -     43241 G-------------A-CA
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 2 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034736  4 -   9314153 g-------------a-ca
i Canis_lupus_dingo.QKWQ01000480.1                       I 2 C 0
s Canis_lupus_familiaris.chr16                            17959212  4 -  59632846 g-------------a-ca
i Canis_lupus_familiaris.chr16                           I 2 C 0
s Canis_lupus_orion.HG994398.1                            18500513  4 +  63665305 g-------------a-ca
i Canis_lupus_orion.HG994398.1                           I 2 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1173  4 -     12242 A-------------G-TA
i Capromys_pilorides.CapPil_scaffold_65020               I 2 I 2
s Carlito_syrichta.NW_007259797.1                           156106  4 -    496798 g-------------a-ca
i Carlito_syrichta.NW_007259797.1                        I 9 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5231  4 -     11696 G-------------A-CA
i Carollia_perspicillata.CarPer_scaffold_92756           I 2 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137193  4 +    179628 A-------------A-TT
i Castor_canadensis.CasCan_scaffold_2074                 I 4 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     93186  4 +    217609 A-------------A-CA
i Catagonus_wagneri.CatWag_scaffold_2839                 I 43 C 0
s Cebuella_niveiventris.k141_1251222                         10209  4 -     11392 a-------------a-tc
i Cebuella_niveiventris.k141_1251222                     I 13 C 0
s Cebuella_pygmaea.k141_1309012                               6277  4 -      7577 a-------------a-tc
i Cebuella_pygmaea.k141_1309012                          I 13 C 0
s Cebus_albifrons.Contig27                                25652946  4 +  26074798 a-------------a-tc
i Cebus_albifrons.Contig27                               I 345 C 0
s Cebus_olivaceus.k141_398305                                 1692  4 +      1777 a-------------g-ga
i Cebus_olivaceus.k141_398305                            C 0 T 162
s Cebus_unicolor.k141_544048                                 50031  4 -     74725 a-------------g-ga
i Cebus_unicolor.k141_544048                             C 0 T 164
s Cephalopachus_bancanus.k141_1423433                         5604  4 +     31688 g-------------a-ca
i Cephalopachus_bancanus.k141_1423433                    I 121 C 0
s Ceratotherium_simum.JH767749.1                          12231573  4 +  27778364 g-------------a-ca
i Ceratotherium_simum.JH767749.1                         I 2 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2600  4 -     25243 G-------------A-CA
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 2 C 0
s Cercocebus_atys.KQ010504.1                               4475800  5 +   4669795 a-------------aatc
i Cercocebus_atys.KQ010504.1                             I 114 C 0
s Cercocebus_chrysogaster.k141_1540778                         304  5 +     17872 a-------------aaTC
i Cercocebus_chrysogaster.k141_1540778                   I 8 C 0
s Cercocebus_lunulatus.k141_3342297                            961  5 -     14043 a-------------aatc
i Cercocebus_lunulatus.k141_3342297                      I 114 C 0
s Cercocebus_torquatus.k141_3057011                           8994  5 +     27781 A-------------AATC
i Cercocebus_torquatus.k141_3057011                      I 111 C 0
s Cercopithecus_ascanius.k141_1024104                         9158  5 -     20310 a-------------aatc
i Cercopithecus_ascanius.k141_1024104                    I 106 C 0
s Cercopithecus_cephus.k141_1078548                          12138  5 +     29689 A-------------AATC
i Cercopithecus_cephus.k141_1078548                      I 107 C 0
s Cercopithecus_diana.k141_1150327                            6891  5 -     20078 a-------------aatc
i Cercopithecus_diana.k141_1150327                       I 106 C 0
s Cercopithecus_hamlyni.k141_187466                          14808  5 -     27936 a-------------aatc
i Cercopithecus_hamlyni.k141_187466                      I 100 C 0
s Cercopithecus_lowei.k141_1854285                            3678  5 -     17152 a-------------aatc
i Cercopithecus_lowei.k141_1854285                       I 106 C 0
s Cercopithecus_albogularis.ctg5                                38817217  5 +  39242232 A-------------AATC
i Cercopithecus_albogularis.ctg5                               I 106 C 0
s Cercopithecus_mona.ctg39                                21222909  5 -  21565898 a-------------aatc
i Cercopithecus_mona.ctg39                               I 106 C 0
s Cercopithecus_neglectus.k141_2526306                       40027  5 -     53127 a-------------aatc
i Cercopithecus_neglectus.k141_2526306                   I 106 C 0
s Cercopithecus_nictitans.k141_1119862                         278  5 +     13442 A-------------AATC
i Cercopithecus_nictitans.k141_1119862                   I 106 C 0
s Cercopithecus_petaurista.k141_807961                       14827  5 -     27947 a-------------aatc
i Cercopithecus_petaurista.k141_807961                   I 106 C 0
s Cercopithecus_pogonias.k141_822820                         14803  5 +     17596 A-------------AATC
i Cercopithecus_pogonias.k141_822820                     I 106 C 0
s Cercopithecus_roloway.k141_2581234                           850  5 +     14005 A-------------AATC
i Cercopithecus_roloway.k141_2581234                     I 106 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             654  4 -      8501 G-------------A-CC
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       I 2 C 0
s Cheirogaleus_major.k141_333249                             21180  3 -     52598 --------------A-GG
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16545  3 +     57038 --------------a-gg
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1252921  4 +   2543920 A-------------A-TT
i Chinchilla_lanigera.JH722012.1                         I 2 I 2
s Chiropotes_albinasus.k141_2206961                            243 17 -     15524 aaggaagggagggag-gg
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18428787  5 -  18827391 a-------------aatc
i Chlorocebus_aethiops.ctg25                             I 106 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15224  5 -     50209 a-------------aatc
i Chlorocebus_pygerythrus.k141_1025673                   I 106 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422224  5 + 135778131 a-------------aatc
i Chlorocebus_sabaeus.CM001947.1                         I 106 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 18434  4 +     19366 G-------------A-CA
i Choloepus_didactylus.ChoDid_scaffold_45914             I 2 C 0
s Choloepus_hoffmanni.KN194906.1                            173511  4 +    839153 g-------------A-CA
i Choloepus_hoffmanni.KN194906.1                         I 2 C 0
s Colobus_angolensis.KN981557.1                            1910736  4 +   2368649 a-------------a-tc
i Colobus_angolensis.KN981557.1                          I 109 C 0
s Colobus_guereza.LG01                                   199948988  4 + 200372422 A-------------A-TC
i Colobus_guereza.LG01                                   I 2 C 0
s Colobus_polykomos.k141_906115                              37270  4 +     84244 A-------------A-TC
i Colobus_polykomos.k141_906115                          I 109 C 0
s Condylura_cristata.JH655891.1                           17548214  3 -  53390261 g-------------a-c-
i Condylura_cristata.JH655891.1                          I 2 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14532  4 -     20389 G-------------A-TA
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 2 C 0
s Cricetulus_griseus.LT883664.1                           11667662  4 + 224834208 A-------------A-CA
i Cricetulus_griseus.LT883664.1                          I 4 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               3116  4 -     19598 T-------------A-CA
i Crocidura_indochinensis.CroInd_scaffold_37019          I 88 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28615  4 -     87169 G-------------A-CA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 2 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837193  4 +   1526836 A-------------C-TT
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 2 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35881  4 +     51376 A-------------G-TA
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 2 I 2
s Dasypus_novemcinctus.JH564415.1                            63661  4 +   2246927 g-------------a-tc
i Dasypus_novemcinctus.JH564415.1                        I 2 C 0
s Daubentonia_madagascariensis.ctg71                      12537406  4 -  12879189 G-------------A-CA
i Daubentonia_madagascariensis.ctg71                     I 2 C 0
s Desmodus_rotundus.KZ672289.1                             8630248  4 +  20541912 g-------------a-ca
i Desmodus_rotundus.KZ672289.1                           I 2 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673424  4 +   1390856 g-------------a-ca
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 2 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6176  4 +    198055 G-------------A-CA
i Diceros_bicornis.DicBicMic_scaffold_5955               I 2 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36515  4 +     67921 A-------------G-TA
i Dinomys_branickii.DinBra_scaffold_21862                I 2 I 2
s Echinops_telfairi.JH980293.1                            48780695  2 + 111700974 g-------------a---
i Echinops_telfairi.JH980293.1                           I 2 C 0
s Eidolon_helvum.KE759718.1                                  10649  4 +     11740 g-------------a-ta
i Eidolon_helvum.KE759718.1                              I 2 C 0
s Ellobius_lutescens.LOEQ01008920.1                          20396  4 -    110024 A-------------G-CA
i Ellobius_lutescens.LOEQ01008920.1                      I 4 C 0
s Ellobius_talpinus.LOJH01081419.1                             527  4 +      8657 A-------------G-CA
i Ellobius_talpinus.LOJH01081419.1                       I 4 C 0
s Enhydra_lutris.KZ291758.1                               16329436  4 -  41312741 g-------------a-ca
i Enhydra_lutris.KZ291758.1                              I 2 C 0
s Eptesicus_fuscus.JH977646.1                              2145851  4 -  14770903 g-------------a-ca
i Eptesicus_fuscus.JH977646.1                            I 2 C 0
s Equus_asinus.JREZ01000139.1                              1283678  4 +   4378816 g-------------a-ca
i Equus_asinus.JREZ01000139.1                            I 2 C 0
s Equus_caballus.CM000403.2                               18531498  4 -  39960074 g-------------a-ca
i Equus_caballus.CM000403.2                              I 2 C 0
s Equus_przewalskii.KK951119.1                               33527  4 +    498745 g-------------a-ca
i Equus_przewalskii.KK951119.1                           I 2 C 0
s Erinaceus_europaeus.JH835339.1                           3328356  4 -   7059049 g-------------a-ca
i Erinaceus_europaeus.JH835339.1                         I 2 C 0
s Erythrocebus_patas.Contig38                             21205392  5 -  21539334 a-------------aatc
i Erythrocebus_patas.Contig38                            I 104 C 0
s Eulemur_albifrons.k141_342033                              13892  3 -     14127 --------------A-CA
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6606  3 -     16928 --------------A-CA
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15638  3 -     25546 --------------A-AA
i Eulemur_coronatus.k141_885031                          I 8 C 0
s Eulemur_flavifrons.k141_1184614                            12834  3 +     26330 --------------a-CA
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14069  3 +     23973 --------------A-ca
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12831  3 +     75513 --------------a-CA
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10761  3 +     97555 --------------a-ca
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              252  3 +     13026 --------------a-ca
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4305  3 -     17153 --------------A-CA
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13878  3 +    111500 --------------A-ca
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237079  4 + 206538554 g-------------a-ca
i Felis_catus.CM001381.2                                 I 2 C 0
s Felis_catus_fca126.CM031415.1                           20195922  4 + 205367284 g-------------a-ca
i Felis_catus_fca126.CM031415.1                          I 2 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  9666  4 -     36744 G-------------A-CA
i Felis_nigripes.FelNig_flattened_line_20823             I 2 C 0
s Fukomys_damarensis.KN121974.1                             850549  4 +   3816255 a-------------a-ta
i Fukomys_damarensis.KN121974.1                          I 2 I 2
s Galago_moholi.ctg2040                                     426722  4 -    453645 G-------------A-CA
i Galago_moholi.ctg2040                                  I 2 C 0
s Galago_senegalensis.k141_631886                             4412  4 +     11339 G-------------A-CA
i Galago_senegalensis.k141_631886                        I 2 C 0
s Galagoides_demidoff.k141_1711393                            1710  4 +     41679 G-------------A-CA
i Galagoides_demidoff.k141_1711393                       I 2 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1307  4 -      9135 a-------------a-ca
i Galeopterus_variegatus.GalVar_scaffold_108840          I 2 C 0
s Glis_glis.GliGli_scaffold_19807                            31474  4 +     49224 A-------------A-TT
i Glis_glis.GliGli_scaffold_19807                        I 2 C 0
s Gorilla_beringei.k141_3596273                              16196  4 -     32273 a-------------a-cc
i Gorilla_beringei.k141_3596273                          I 2 C 0
s Gorilla_gorilla.LT578341.1                             186338333  4 + 186649187 a-------------a-cc
i Gorilla_gorilla.LT578341.1                             I 2 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   32716  4 +     78134 A-------------A-TT
i Graphiurus_murinus.GraMur_scaffold_10447               I 2 C 0
s Hapalemur_alaotrensis.k141_170648                           6937  3 -     19426 --------------A-CA
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12086  3 -     15286 --------------A-CA
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13725  3 +     18253 --------------a-CA
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13826  3 -     41752 --------------A-CA
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13663  3 -     16460 --------------A-CA
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242448  4 +    327341 G-------------A-CA
i Helogale_parvula.HelPar_flattened_line_2585            I 2 C 0
s Heterocephalus_glaber.JH602082.1                        20662338  4 +  22651954 A-------------A-TA
i Heterocephalus_glaber.JH602082.1                       I 2 I 2
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1008  4 +      7595 G-------------G-CC
i Heterohyrax_brucei.HetBruBak_scaffold_122365           I 2 C 0
s Hoolock_leuconedys.ctg274                                    434995  4 +    630532 a-------------a-TC
i Hoolock_leuconedys.ctg274                                 I 2 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45142  4 +     55795 G-------------A-CA
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 2 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83227  4 +    135385 A-------------G-TA
i Hystrix_cristata.HysCri_scaffold_5660                  I 2 I 2
s Indri_indri.k141_3655594                                   22626  3 +     31101 --------------a-CA
i Indri_indri.k141_3655594                               I 5 C 0
s Jaculus_jaculus.JH725527.1                               8276908  4 -   9596543 A-------------A-TT
i Jaculus_jaculus.JH725527.1                             I 2 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    16496  4 -     42476 G-------------A-CA
i Lasiurus_borealis.LasBor_scaffold_32767                I 2 C 0
s Lemur_catta.scaffold_24                                 15524178  3 -  30322482 --------------A-CA
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7853  4 +     64341 A-------------A-TC
i Leontocebus_fuscicollis.k141_1820339                   I 13 C 0
s Leontocebus_illigeri.k141_1304848                            193  4 -     35062 a-------------a-tc
i Leontocebus_illigeri.k141_1304848                      I 38 C 0
s Leontocebus_nigricollis.k141_4610752                        7881  4 +     35603 A-------------A-TC
i Leontocebus_nigricollis.k141_4610752                   I 13 C 0
s Leontopithecus_chrysomelas.k141_1519602                    29297  4 +     38576 A-------------A-TC
i Leontopithecus_chrysomelas.k141_1519602                I 13 C 0
s Leontopithecus_rosalia.k141_464620                         25997  4 +     66356 A-------------A-TC
i Leontopithecus_rosalia.k141_464620                     I 13 C 0
s Lepilemur_ankaranensis.k141_596936                         11072  1 -     23766 -----------------A
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29133  1 +     45836 -----------------A
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1671  1 +     25010 -----------------A
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27069  1 +     54090 -----------------A
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3043175  4 +   3914936 g-------------a-ca
i Leptonychotes_weddellii.KB714746.1                     I 2 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6597  4 -     14121 a-------------a-ca
i Lepus_americanus.LepAme_scaffold_107385                I 3 C 0
s Lophocebus_aterrimus.ctg367                              1437345  5 +   1826925 A-------------AATA
i Lophocebus_aterrimus.ctg367                            I 116 C 0
s Loris_lydekkerianus.k141_2539221                            5971  4 +     11245 G-------------A-CA
i Loris_lydekkerianus.k141_2539221                       I 2 C 0
s Loris_tardigradus.ctg83                                  1004791  4 +   6120653 G-------------A-CA
i Loris_tardigradus.ctg83                                I 2 C 0
s Loxodonta_africana.GL010049.1                            4217441  4 -  43346337 g-------------a-cc
i Loxodonta_africana.GL010049.1                          I 2 C 0
s Lycaon_pictus.CM007581.1                                17955452  4 -  59628241 N-------------N-NN
i Lycaon_pictus.CM007581.1                               I 2 C 0
s Macaca_arctoides.k141_2326796                               7051  2 +     40492 a-------------a---
i Macaca_arctoides.k141_2326796                          C 0 I 108
s Macaca_assamensis.Contig5                               59676310  2 +  60120075 a-------------a---
i Macaca_assamensis.Contig5                              C 0 I 108
s Macaca_cyclopis.k119_18836                                 12823  2 -     26193 a-------------a---
i Macaca_cyclopis.k119_18836                             C 0 I 111
s Macaca_fascicularis.k141_814140                            80607  2 -    114318 a-------------a---
i Macaca_fascicularis.k141_814140                        C 0 I 111
s Macaca_fuscata.k119_255327                                  6298  2 -     23192 a-------------a---
i Macaca_fuscata.k119_255327                             C 0 I 107
s Macaca_leonina.k141_3550399                                15767  2 -     29190 a-------------a---
i Macaca_leonina.k141_3550399                            C 0 I 111
s Macaca_maura.k141_2733130                                  24332  2 +     37952 a-------------a---
i Macaca_maura.k141_2733130                              C 0 I 111
s Macaca_mulatta.NC_041758.1                             186839421  2 + 187317192 a-------------a---
i Macaca_mulatta.NC_041758.1                             C 0 I 111
s Macaca_nemestrina.KQ007038.1                            25457984  2 -  25927173 a-------------a---
i Macaca_nemestrina.KQ007038.1                           C 0 I 111
s Macaca_nigra.k141_1655396                                  80180  2 +     89720 a-------------a---
i Macaca_nigra.k141_1655396                              C 0 I 111
s Macaca_radiata.k141_3680011                                 7181  2 +     20474 a-------------a---
i Macaca_radiata.k141_3680011                            C 0 I 111
s Macaca_siberu.k141_635500                                   6981  2 -     14993 a-------------a---
i Macaca_siberu.k141_635500                              C 0 I 111
s Macaca_silenus.Contig273                                  329847  2 -    668171 a-------------a---
i Macaca_silenus.Contig273                               C 0 I 111
s Macaca_thibetana.k99_256239                                 5297  2 -     24072 a-------------a---
i Macaca_thibetana.k99_256239                            C 0 I 108
s Macaca_tonkeana.k141_1498238                               25919  2 -     45290 a-------------a---
i Macaca_tonkeana.k141_1498238                           C 0 I 111
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90742  4 +     94391 G-------------A-TA
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 2 C 0
s Mandrillus_leucophaeus.scaffold280                      23937620  5 -  24302211 a-------------aatc
i Mandrillus_leucophaeus.scaffold280                     I 114 C 0
s Mandrillus_sphinx.Contig270                               351744  5 +    752769 A-------------AATC
i Mandrillus_sphinx.Contig270                            I 114 C 0
s Manis_javanica.JSZB01003497.1                              18618  4 +    737560 g-------------a-ca
i Manis_javanica.JSZB01003497.1                          I 2 C 0
s Manis_pentadactyla.KN006162.1                              50611  4 -    317179 g-------------a-ca
i Manis_pentadactyla.KN006162.1                          I 2 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        10457  4 -    207569 G-------------A-TA
i Megaderma_lyra.MegLyr_scaffold_4542                    I 2 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10173  4 +     13704 G-------------A-CA
i Mellivora_capensis.MelCap_flattened_line_69365         I 2 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 32843  4 +    140813 T-------------G-CT
i Meriones_unguiculatus.MerUng_scaffold_7390             I 16 C 0
s Mesocricetus_auratus.KB708134.1                         12182337  4 -  29670104 A-------------T-CA
i Mesocricetus_auratus.KB708134.1                        I 4 C 0
s Mico_argentatus.k141_1239457                                6088  4 -      7380 a-------------a-tc
i Mico_argentatus.k141_1239457                           I 13 C 0
s Mico_humeralifer.k141_2457295                                317  4 +      1079 A-------------A-TC
i Mico_humeralifer.k141_2457295                          I 13 C 0
s Mico_schneideri.k141_1950671                                      6100  4 -      7356 a-------------a-tc
i Mico_schneideri.k141_1950671                                 I 13 C 0
s Microcebus_murinus.CM007674.1                           18291603  3 -  93316391 --------------a-ca
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    22444  2 -    145209 G-------------A---
i Microgale_talazaci.MicTal_scaffold_6613                I 2 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                15775  4 -     19307 G-------------A-CA
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 2 C 0
s Microtus_ochrogaster.CM001695.1                         11260575  4 -  27267610 A-------------G-CA
i Microtus_ochrogaster.CM001695.1                        I 4 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850737  4 +   8254450 g-------------a-ca
i Miniopterus_natalensis.LDJU01000034.1                  I 11 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34418  4 +     64694 G-------------A-CA
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 11 C 0
s Miopithecus_ogouensis.k141_534055                           9324  5 -     28506 a-------------aatc
i Miopithecus_ogouensis.k141_534055                      I 105 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6043  4 -      8324 G-------------A-CA
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 2 C 0
s Mirza_zaza.k141_952172                                      9148  3 -     37649 --------------A-CA
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141747  4 -    366855 G-------------A-CA
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 2 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35548  4 +     37127 G-------------A-CA
i Mungos_mungo.MunMun_flattened_line_23663               I 2 C 0
s Murina_feae.MurFea_scaffold_85699                           6947  4 +     14753 G-------------A-CA
i Murina_feae.MurFea_scaffold_85699                      I 2 C 0
s Mus_caroli.LT608237.1                                   84361457  4 - 120012414 A-------------g-ct
i Mus_caroli.LT608237.1                                  I 4 C 0
s Mus_musculus.chr8                                       87650455  4 - 129401213 a-------------g-ct
i Mus_musculus.chr8                                      I 4 C 0
s Mus_pahari.LT608297.1                                   31355114  4 -  89631738 A-------------G-CT
i Mus_pahari.LT608297.1                                  I 4 C 0
s Mus_spretus.CM004101.1                                  90752516  4 - 130317789 a-------------g-ct
i Mus_spretus.CM004101.1                                 I 4 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              5056  3 +     14296 --------------A-TT
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               301586  4 -  14710649 g-------------a-ca
i Mustela_putorius.JH418006.1                            I 2 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71360  4 -     80779 A-------------G-TA
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 2 I 2
s Myotis_brandtii.KE162005.1                                280590  4 -  10118263 g-------------a-ca
i Myotis_brandtii.KE162005.1                             I 2 C 0
s Myotis_davidii.KB100139.1                                1587855  4 -   6019432 g-------------a-ca
i Myotis_davidii.KB100139.1                              I 2 C 0
s Myotis_lucifugus.GL429869.1                              3903944  4 -   4330536 g-------------a-ca
i Myotis_lucifugus.GL429869.1                            I 2 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                          93  4 +      1835 G-------------A-CA
i Myotis_myotis.MyoMyo_scaffold_281845                   I 2 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189385  4 +    196477 G-------------A-CA
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 2 C 0
s Nannospalax_galili.KL204047.1                            2034178  4 -   3037898 A-------------a-tt
i Nannospalax_galili.KL204047.1                          I 2 C 0
s Nasalis_larvatus.k141_413338                               15327  4 +     21681 A-------------A-TC
i Nasalis_larvatus.k141_413338                           I 113 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20307629  4 +  31847680 g-------------a-ca
i Neomonachus_schauinslandi.NINY01007730.1               I 2 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149520  4 -   9404916 g-------------a-ca
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 2 C 0
s Nycticebus_bengalensis.LG01                            102586335  4 - 196305487 G-------------A-CA
i Nycticebus_bengalensis.LG01                            I 2 C 0
s Nycticebus_coucang.k141_1127096                              259  4 +      2075 g-------------a-ca
i Nycticebus_coucang.k141_1127096                        I 2 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761689  4 + 199412804 G-------------A-CA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 2 C 0
s Ochotona_princeps.JH802162.1                             1363661  4 +   3988456 a-------------a-ta
i Ochotona_princeps.JH802162.1                           I 2 C 0
s Octodon_degus.JH651603.1                                  746970  4 +  11899542 A-------------G-TA
i Octodon_degus.JH651603.1                               I 2 I 2
s Odobenus_rosmarus.KB229312.1                              506774  4 -   2017862 g-------------a-ca
i Odobenus_rosmarus.KB229312.1                           I 7 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   25243  4 +     28053 A-------------G-CG
i Ondatra_zibethicus.OndZib_scaffold_46174               I 4 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    80243  4 +    102263 A-------------G-CA
i Onychomys_torridus.OnyTor_scaffold_2986                I 4 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9961  4 -     18566 G-------------A-CT
i Orycteropus_afer.OryAfe_flattened_line_144387          I 2 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147457  4 + 174332312 a-------------a-ca
i Oryctolagus_cuniculus.CM000791.1                       I 4 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462468  4 -    559221 g-------------a-ca
i Otocyon_megalotis.JAEUCK010005147.1                    I 2 C 0
s Otolemur_crassicaudatus.k141_222918                         4242  4 +      8798 G-------------A-CA
i Otolemur_crassicaudatus.k141_222918                    I 2 C 0
s Otolemur_garnettii.GL873799.1                             696405  4 -   1103335 g-------------a-ca
i Otolemur_garnettii.GL873799.1                          I 2 C 0
s Pan_paniscus.KQ411613.1                                    44284  4 +     80009 a-------------a-cc
i Pan_paniscus.KQ411613.1                                I 2 C 0
s Pan_troglodytes.CM009242.2                             189143186  4 + 189151597 a-------------a-cC
i Pan_troglodytes.CM009242.2                             I 2 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  151281  4 +    230217 G-------------A-CA
i Panthera_onca.PanOnc_flattened_line_3271               I 2 I 2
s Panthera_pardus.KV860321.1                                264490  4 +  18783137 g-------------a-ca
i Panthera_pardus.KV860321.1                             I 2 I 2
s Panthera_tigris.KE722367.1                               4721369  4 -   8748460 g-------------a-ca
i Panthera_tigris.KE722367.1                             I 2 I 2
s Papio_anubis.CM001495.2                                183443422  5 + 183742232 a-------------aatc
i Papio_anubis.CM001495.2                                I 114 C 0
s Papio_cynocephalus.k141_4307930                             7068  5 +     20448 A-------------AATC
i Papio_cynocephalus.k141_4307930                        I 114 C 0
s Papio_hamadryas.Contig39                                20563880  5 +  20919399 A-------------AATC
i Papio_hamadryas.Contig39                               I 114 C 0
s Papio_kindae.k141_1936966                                   5812  5 +     41871 A-------------AATC
i Papio_kindae.k141_1936966                              I 114 C 0
s Papio_papio.k141_802527                                     9105  5 +     27711 A-------------AATC
i Papio_papio.k141_802527                                I 114 C 0
s Papio_ursinus.k141_3428135                                  9174  5 +      9205 A-------------AATC
i Papio_ursinus.k141_3428135                             I 114 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12778  4 -     78924 G-------------A-CA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 2 C 0
s Perodicticus_ibeanus.k141_855320                           10223  4 +     13100 G-------------A-CA
i Perodicticus_ibeanus.k141_855320                       I 2 C 0
s Perodicticus_potto.k141_1092580                             8629  4 +     25941 G-------------A-CA
i Perodicticus_potto.k141_1092580                        I 2 C 0
s Peromyscus_maniculatus.KI615324.1                       18194869  4 -  18517816 A-------------G-CA
i Peromyscus_maniculatus.KI615324.1                      I 4 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28239  4 -     29689 A-------------G-TA
i Petromus_typicus.PetTyp_scaffold_42190                 I 2 I 2
s Piliocolobus_badius.k141_1234363                           43709  4 +     62158 a-------------a-aa
i Piliocolobus_badius.k141_1234363                       C 0 I 109
s Piliocolobus_gordonorum.k141_381342                        38456  4 +     89929 a-------------a-aa
i Piliocolobus_gordonorum.k141_381342                    C 0 I 109
s Piliocolobus_kirkii.k141_448987                            39872  4 +     51399 a-------------a-aa
i Piliocolobus_kirkii.k141_448987                        C 0 I 109
s Piliocolobus_tephrosceles.PDMG02000141.1                14296110  4 -  14605196 a-------------a-aa
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 109
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1887  2 +     22620 G-------------A---
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 2 C 0
s Pongo_abelii.CM009266.2                                189131322  4 + 189387572 a-------------a-tc
i Pongo_abelii.CM009266.2                                I 2 C 0
s Pongo_pygmaeus.ctg66                                     9570929  4 +   9816681 A-------------A-TC
i Pongo_pygmaeus.ctg66                                   I 2 C 0
s Presbytis_comata.k141_677006                               73503  4 -     81375 a-------------a-tc
i Presbytis_comata.k141_677006                           I 113 C 0
s Presbytis_mitrata.k141_1087752                              5323  4 +     19060 A-------------A-TC
i Presbytis_mitrata.k141_1087752                         I 113 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 13463  4 -     22811 G-------------G-CC
i Procavia_capensis.ProCapCap_scaffold_85530             I 2 C 0
s Prolemur_simus.MPIZ01000396.1                            2596858  3 -   4620579 --------------a-ca
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990844  3 +   2598838 --------------a-ca
i Propithecus_coquerelli.NW_012148875.1                  I 8 C 0
s Propithecus_coronatus.k141_347390                          29156  3 +     38485 --------------A-CA
i Propithecus_coronatus.k141_347390                      I 8 C 0
s Propithecus_diadema.k141_58108                              1199  3 -     13098 --------------A-CA
i Propithecus_diadema.k141_58108                         I 8 C 0
s Propithecus_edwardsi.k141_1176054                          26677  3 +     35766 --------------A-CA
i Propithecus_edwardsi.k141_1176054                      I 8 C 0
s Propithecus_perrieri.k141_1200571                           4864  3 -     24134 --------------A-CA
i Propithecus_perrieri.k141_1200571                      I 8 C 0
s Propithecus_tattersalli.k141_790011                        28689  3 -     67325 --------------A-CA
i Propithecus_tattersalli.k141_790011                    I 8 C 0
s Propithecus_verreauxi.k141_956661                           4912  3 -      6182 --------------A-CA
i Propithecus_verreauxi.k141_956661                      I 8 C 0
s Psammomys_obesus.NESX01036370.1                            10487  4 -     21651 T-------------G-CT
i Psammomys_obesus.NESX01036370.1                        I 4 C 0
s Pteronotus_parnellii.KE909381.1                            15202  4 -     21811 g-------------a-ca
i Pteronotus_parnellii.KE909381.1                        I 2 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40363  4 +     42204 G-------------A-CA
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 2 C 0
s Pteropus_alecto.KB030862.1                              22976908  4 +  28871421 g-------------a-ta
i Pteropus_alecto.KB030862.1                             I 2 C 0
s Pteropus_vampyrus.KN534172.1                                6961  4 -      8028 g-------------a-ta
i Pteropus_vampyrus.KN534172.1                           I 2 C 0
s Puma_concolor.QAVW01001104.1                            20274435  4 -  38429054 g-------------a-ca
i Puma_concolor.QAVW01001104.1                           I 2 C 0
s Pygathrix_cinerea.k141_1153803                             15336  4 -     91421 a-------------a-tc
i Pygathrix_cinerea.k141_1153803                         I 113 C 0
s Pygathrix_nigripes_b.ctg100                                 7609456  4 +   7812017 A-------------A-TC
i Pygathrix_nigripes_b.ctg100                               I 113 C 0
s Pygathrix_nigripes_a.k141_215492                             15308  4 -     72585 a-------------a-tc
i Pygathrix_nigripes_a.k141_215492                         I 113 C 0
s Rattus_norvegicus.chr16                                 53570717  4 +  90668790 A-------------G-CT
i Rattus_norvegicus.chr16                                I 4 C 0
s Rhinopithecus_bieti.k119_217274                             7019  4 -     11128 a-------------a-tc
i Rhinopithecus_bieti.k119_217274                        I 111 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236368  4 - 195417433 a-------------a-tc
i Rhinopithecus_roxellana.NC_044550.1                    I 107 C 0
s Rhinopithecus_strykeri.ctg102                            7672024  4 +   7961872 A-------------A-TC
i Rhinopithecus_strykeri.ctg102                          I 111 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87930  4 -     96226 G-------------A-TA
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 2 C 0
s Saguinus_bicolor.k141_8081                                   469  4 +     42994 A-------------A-TC
i Saguinus_bicolor.k141_8081                             I 13 C 0
s Saguinus_imperator.k141_57697                                254  4 +      1030 A-------------A-TC
i Saguinus_imperator.k141_57697                          I 13 C 0
s Saguinus_inustus.k141_3945547                                333  4 -      8737 a-------------a-tc
i Saguinus_inustus.k141_3945547                          I 42 C 0
s Saguinus_labiatus.k141_285685                               8499  3 +      8564 a-------------c-t-
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469820  4 + 209938924 A-------------A-TC
i Saguinus_midas.LG03                                    I 13 C 0
s Saguinus_mystax.k141_374627                                 8455  4 -      9399 a-------------a-tc
i Saguinus_mystax.k141_374627                            I 13 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951193  4 - 121099817 a-------------t-tc
i Saimiri_boliviensis.NW_024100920.1                     I 9 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23532  4 +     46362 A-------------T-TC
i Saimiri_cassiquiarensis.k141_2188234                   I 9 C 0
s Saimiri_macrodon.k141_716185                               23627  4 +     45824 A-------------T-TC
i Saimiri_macrodon.k141_716185                           I 9 C 0
s Saimiri_oerstedii.k141_1487881                             40306  4 -     64574 a-------------t-tc
i Saimiri_oerstedii.k141_1487881                         I 9 C 0
s Saimiri_sciureus.k141_2278166                               3378  4 -     23631 a-------------t-tc
i Saimiri_sciureus.k141_2278166                          I 9 C 0
s Saimiri_ustus.k141_1484609                                 23523  4 -     61129 a-------------t-tc
i Saimiri_ustus.k141_1484609                             I 9 C 0
s Sapajus_apella.ctg103                                    5420901  4 -   5703754 a-------------a-tc
i Sapajus_apella.ctg103                                  I 116 C 0
s Sapajus_macrocephalus.k141_351809                          56142  4 -     80660 a-------------a-tc
i Sapajus_macrocephalus.k141_351809                      I 13 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153333  3 -    313613 G-------------A-C-
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 2 C 0
s Semnopithecus_entellus.k141_1672505                          200  4 -     12572 A-------------A-TC
i Semnopithecus_entellus.k141_1672505                    I 12 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27050  4 +     39453 A-------------A-TC
i Semnopithecus_hypoleucos.k141_1615806                  I 112 C 0
s Semnopithecus_johnii.k141_670120                            7568  4 +     27826 A-------------A-TC
i Semnopithecus_johnii.k141_670120                       I 111 C 0
s Semnopithecus_priam.k141_638794                             7090  4 -     19483 a-------------a-tc
i Semnopithecus_priam.k141_638794                        I 112 C 0
s Semnopithecus_schistaceus.k141_1572284                       391  4 -     12762 A-------------A-TC
i Semnopithecus_schistaceus.k141_1572284                 I 12 C 0
s Semnopithecus_vetulus.k141_910252                            252  4 +     13763 A-------------A-TC
i Semnopithecus_vetulus.k141_910252                      I 12 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                      415  4 -     30804 A-------------G-TA
i Sigmodon_hispidus.SigHis_scaffold_42075                I 4 T 4
s Solenodon_paradoxus.SolPar_flattened_line_126               3882  4 +   1910179 G-------------A-AA
i Solenodon_paradoxus.SolPar_flattened_line_126          I 2 C 0
s Sorex_araneus.JH798187.1                                13651149  4 -  18376816 A-------------A-CA
i Sorex_araneus.JH798187.1                               I 93 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30861  4 +     97271 G-------------A-CA
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 2 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              18451  4 -    196729 G-------------A-CA
i Suricata_suricatta.SurSur_flattened_line_6629          I 2 C 0
s Sus_scrofa.CM000828.4                                    6810934  4 +  69701581 g-------------a-ca
i Sus_scrofa.CM000828.4                                  I 43 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                10929  2 +     41958 G-------------A---
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 2 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72746  4 +    116680 G-------------A-CA
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 2 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118891  4 -    156842 G-------------A-AA
i Tapirus_indicus.TapInd_scaffold_9301                   I 2 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387348  4 +    539355 G-------------A-AA
i Tapirus_terrestris.TapTer_scaffold_755                 I 2 C 0
s Tarsius_lariang.k141_2201908                               26488  4 +     70052 a-------------a-ga
i Tarsius_lariang.k141_2201908                           T 106 I 109
s Tarsius_wallacei.k141_254427                                1285  4 -     16117 a-------------a-ga
i Tarsius_wallacei.k141_254427                           T 106 I 109
s Theropithecus_gelada.CM009954.1                        186428740  5 + 186847797 a-------------aatc
i Theropithecus_gelada.CM009954.1                        I 114 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105560  4 +    114563 A-------------G-TG
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 2 I 2
s Tolypeutes_matacus.TolMat_scaffold_228639                   6530  4 +      8208 G-------------A-CC
i Tolypeutes_matacus.TolMat_scaffold_228639              I 2 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81321  4 +    610378 G-------------A-CA
i Tonatia_saurophila.TonSau_scaffold_294                 I 2 C 0
s Trachypithecus_auratus.k141_722599                         11141  4 -     20410 a-------------a-tc
i Trachypithecus_auratus.k141_722599                     I 113 C 0
s Trachypithecus_crepusculus.k141_582567                       255  4 -     12674 a-------------a-tc
i Trachypithecus_crepusculus.k141_582567                 I 119 C 0
s Trachypithecus_cristatus.k141_580354                       11242  4 +     19930 A-------------A-TC
i Trachypithecus_cristatus.k141_580354                   I 113 C 0
s Trachypithecus_francoisi.k141_1412647                       7653  4 -     19997 a-------------a-tc
i Trachypithecus_francoisi.k141_1412647                  I 113 C 0
s Trachypithecus_geei.k141_277701                            47792  4 -     60166 a-------------a-tc
i Trachypithecus_geei.k141_277701                        I 112 C 0
s Trachypithecus_germaini.k141_912491                        15264  4 -     27529 a-------------a-tc
i Trachypithecus_germaini.k141_912491                    I 113 C 0
s Trachypithecus_hatinhensis.k141_143409                     15208  4 -     18194 a-------------a-tc
i Trachypithecus_hatinhensis.k141_143409                 I 2 C 0
s Trachypithecus_laotum.k141_907409                           8920  4 -     21137 a-------------a-tc
i Trachypithecus_laotum.k141_907409                      I 113 C 0
s Trachypithecus_leucocephalus.k141_587342                    7623  4 -     10723 a-------------a-tc
i Trachypithecus_leucocephalus.k141_587342               I 113 C 0
s Trachypithecus_melamera.k141_434728                         6795  4 +      9834 A-------------A-TC
i Trachypithecus_melamera.k141_434728                    I 113 C 0
s Trachypithecus_obscurus.k141_190785                        25108  4 +     32220 A-------------A-TC
i Trachypithecus_obscurus.k141_190785                    I 113 C 0
s Trachypithecus_phayrei.ctg124                            5939210  4 +   6242583 A-------------A-TC
i Trachypithecus_phayrei.ctg124                          I 113 C 0
s Trachypithecus_pileatus.k141_2007326                        8461  4 +     20839 A-------------A-TC
i Trachypithecus_pileatus.k141_2007326                   I 112 C 0
s Trichechus_manatus.JH594705.1                            4293362  4 +  10818551 g-------------a-tc
i Trichechus_manatus.JH594705.1                          I 2 C 0
s Tupaia_chinensis.KB320699.1                              2155704  4 +   4065304 a-------------a-ca
i Tupaia_chinensis.KB320699.1                            I 2 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9357  4 -     10553 A-------------A-CA
i Tupaia_tana.TupTan_flattened_line_97126                I 2 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   53430  3 -     77625 C-------------A-C-
i Uropsilus_gracilis.UroGra_scaffold_12083               I 2 C 0
s Ursus_maritimus.KK499267.1                               4850563  4 -   5085361 g-------------a-ca
i Ursus_maritimus.KK499267.1                             I 2 C 0
s Varecia_rubra.k141_590885                                  11523  3 +     50397 --------------A-GA
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11582  3 +     24756 --------------A-GA
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5372015  4 -   5488506 g-------------a-ca
i Vicugna_pacos.KN270157.1                               I 8 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10916  4 -     43706 G-------------A-CA
i Vulpes_lagopus.VulLag_flattened_line_30954             I 2 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          5492  4 +     86975 g-------------a-ca
i Zalophus_californianus.ZalCal_flattened_line_17732     I 2 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      15004  4 +     63895 A-------------A-TT
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 2 C 0
e Alouatta_seniculus.k141_117119                             14962 136 +     50774 T
e Alouatta_discolor.k141_566626                              11280 196 +     28687 T
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Xerus_inauris.XerIna_scaffold_2302                          1179  7 +    224448 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spermophilus_dauricus.KZ294078.1                         1954051  7 -   3870691 I
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Marmota_marmota.CZRN01000018.1                          33103196  7 -  40650429 I
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Ictidomys_tridecemlineatus.JH393364.1                    7520996  7 -   7955117 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Elephantulus_edwardii.JH947257.1                         1097781 85 +  10337057 T
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 50301  8 +     63868 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6831  7 +     62944 a---aa--------g-a--ga
s Acinonyx_jubatus.LLWD01001279.1                           827432  7 -   1699592 c---ag--------a-a--ag
i Acinonyx_jubatus.LLWD01001279.1                        C 0 T 143
s Acomys_cahirinus.AcoCah_scaffold_12655                     70899  7 +     87051 C---AG--------T-A--AG
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 T 13
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510706  7 -  29979442 c---aa--------a-a--ag
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 T 156
s Ailurus_fulgens.LNAC01001112.1                             79482  7 -    347723 c---ag--------a-a--ag
i Ailurus_fulgens.LNAC01001112.1                         C 0 T 162
s Allactaga_bullata.AllBul_scaffold_9566                     74611  7 -     89534 C---AG--------C-A--AG
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 T 26
s Allenopithecus_nigroviridis.k141_3361533                   14875  7 -     52922 c---ag--------c-a--aa
i Allenopithecus_nigroviridis.k141_3361533               C 0 T 218
s Allochrocebus_lhoesti.k141_4309873                         14790  7 -     28001 c---ag--------c-a--aa
i Allochrocebus_lhoesti.k141_4309873                     C 0 T 197
s Allochrocebus_preussi.k141_1442296                          5288  7 -     18505 c---ag--------c-a--aa
i Allochrocebus_preussi.k141_1442296                     C 0 T 199
s Allochrocebus_solatus.k141_166128                           6140  7 -     12518 c---ag--------c-a--aa
i Allochrocebus_solatus.k141_166128                      C 0 T 197
s Alouatta_belzebul.k141_3560514                              7519  7 +     51355 a---aa--------a-a--ga
i Alouatta_belzebul.k141_3560514                         C 0 T 110
s Alouatta_caraya.k141_1701091                                 633 10 -     36483 agaaag--------a-a--aa
i Alouatta_caraya.k141_1701091                           C 0 T 105
s Alouatta_discolor.k141_566626                              11084  2 +     28687 -------------------ga
i Alouatta_discolor.k141_566626                          T 196 I 6
s Alouatta_juara.k141_1509701                                24906  7 +     25266 a---ag--------a-a--aa
i Alouatta_juara.k141_1509701                            C 0 T 106
s Alouatta_macconnelli.k141_918386                             627  7 -      9457 a---ag--------a-a--aa
i Alouatta_macconnelli.k141_918386                       C 0 T 102
s Alouatta_nigerrima.k141_3472759                            18213  7 -     18578 a---ag--------a-a--aa
i Alouatta_nigerrima.k141_3472759                        C 0 T 110
s Alouatta_palliata.k141_2135620                              3600  7 +     47717 a---aa--------a-a--ga
i Alouatta_palliata.k141_2135620                         C 0 T 98
s Alouatta_puruensis.k141_362188                               305  7 +      5663 a---ag--------a-a--aa
i Alouatta_puruensis.k141_362188                         C 0 T 106
s Anoura_caudifer.AnoCau_scaffold_1412                      185478  7 +    412891 G---AG--------T-A--AG
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 T 163
s Aotus_azarae.k141_3104676                                  15535  2 -     33861 -------------------gg
i Aotus_azarae.k141_3104676                              C 0 T 86
s Aotus_griseimembra.k141_2240599                            15562  7 -     34016 g---gg--------a-g--gg
i Aotus_griseimembra.k141_2240599                        C 0 T 98
s Aotus_nancymaae.KZ198451.1                               4297955  7 -   5030052 g---gg--------a-g--gg
i Aotus_nancymaae.KZ198451.1                             C 0 T 94
s Aotus_trivirgatus.k141_2152450                             15564  7 -     34685 g---gg--------a-g--gg
i Aotus_trivirgatus.k141_2152450                         C 0 T 98
s Aotus_vociferans.k141_344750                               28688  7 -     47192 g---gg--------a-g--gg
i Aotus_vociferans.k141_344750                           C 0 T 98
s Aplodontia_rufa.AprRuf_scaffold_68852                      12730  7 +     20879 C---AA--------C-A--AG
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 T 81
s Arctocebus_calabarensis.k141_2318572                       11583  6 +     14667 C---AG--------C-A--A-
i Arctocebus_calabarensis.k141_2318572                   C 0 T 70
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4886  7 +     43469 G---AG--------C-A--GG
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 T 162
s Avahi_laniger.k141_765380                                  53813  7 -     92717 C---AG--------T-G--AA
i Avahi_laniger.k141_765380                              C 0 T 98
s Avahi_peyrierasi.k141_1424874                              54435  7 +     85213 C---AG--------T-G--AA
i Avahi_peyrierasi.k141_1424874                          C 0 T 93
s Callibella_humilis.k141_1278103                             5578  7 -     10423 c---ag--------c-c--ag
i Callibella_humilis.k141_1278103                        C 0 T 379
s Callimico_goeldii.k141_1091182                             25047  7 +     31915 C---AG--------C-C--AG
i Callimico_goeldii.k141_1091182                         C 0 T 376
s Callithrix_geoffroyi.k119_512088                            5263  2 +      5267 g---g----------------
i Callithrix_geoffroyi.k119_512088                       C 0 T 93
s Callithrix_jacchus.pat_scaffold_3                       23590732  7 - 189096842 c---ag--------c-c--ag
i Callithrix_jacchus.pat_scaffold_3                      C 0 T 353
s Callithrix_kuhlii.k119_1168854                               131  7 -     12329 C---AG--------C-C--AG
i Callithrix_kuhlii.k119_1168854                         C 0 T 13
s Camelus_bactrianus.KN276810.1                           10002519  7 -  17673402 c---aG--------T-A--AG
i Camelus_bactrianus.KN276810.1                          C 0 T 173
s Camelus_dromedarius.KN272107.1                           2334977  7 -   7040546 c---aG--------T-A--AG
i Camelus_dromedarius.KN272107.1                         C 0 T 173
s Camelus_ferus.KB017975.1                                  403261  7 -   1652518 c---ag--------t-a--ag
i Camelus_ferus.KB017975.1                               C 0 T 174
s CanFam4.chr16                                           17799297  7 -  60362399 T---GG--------G-A--AG
i CanFam4.chr16                                          C 0 T 158
s Canis_lupus_VD.CanFam_VD_scaffold_27089                       45  7 -     43241 T---GG--------G-A--AG
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 T 16
s Canis_lupus_dingo.QKWQ01000480.1                         9034740  7 -   9314153 t---gg--------G-A--AG
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 T 158
s Canis_lupus_familiaris.chr16                            17959216  7 -  59632846 t---gg--------G-A--AG
i Canis_lupus_familiaris.chr16                           C 0 T 369
s Canis_lupus_orion.HG994398.1                            18500517  7 +  63665305 t---gg--------G-A--AG
i Canis_lupus_orion.HG994398.1                           C 0 T 158
s Capromys_pilorides.CapPil_scaffold_65020                    1179  7 -     12242 C---CA--------T-A--AG
i Capromys_pilorides.CapPil_scaffold_65020               I 2 T 82
s Carlito_syrichta.NW_007259797.1                           156110  7 -    496798 c---ag--------c-a--ag
i Carlito_syrichta.NW_007259797.1                        C 0 T 76
s Carollia_perspicillata.CarPer_scaffold_92756                5235  7 -     11696 G---AG--------T-A--AG
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 T 153
s Castor_canadensis.CasCan_scaffold_2074                    137197  7 +    179628 C---AA--------C-A--AG
i Castor_canadensis.CasCan_scaffold_2074                 C 0 T 66
s Catagonus_wagneri.CatWag_scaffold_2839                     93190  7 +    217609 C---AG--------T-A--AG
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 T 214
s Cebuella_niveiventris.k141_1251222                         10213  7 -     11392 c---ag--------c-c--ag
i Cebuella_niveiventris.k141_1251222                     C 0 T 389
s Cebuella_pygmaea.k141_1309012                               6281  7 -      7577 c---ag--------c-c--ag
i Cebuella_pygmaea.k141_1309012                          C 0 T 359
s Cebus_albifrons.Contig27                                25652950  7 +  26074798 c---ag--------c-g--ag
i Cebus_albifrons.Contig27                               C 0 T 999
s Cebus_olivaceus.k141_1764483                                 888  7 +     28840 C---AG--------C-G--AG
i Cebus_olivaceus.k141_1764483                           I 334 T 320
s Cebus_unicolor.k141_1837183                                  613  7 +     14051 C---AG--------C-G--AG
i Cebus_unicolor.k141_1837183                            I 333 T 315
s Cephalopachus_bancanus.k141_1423433                         5608  7 +     31688 c---ag--------c-a--ag
i Cephalopachus_bancanus.k141_1423433                    C 0 T 212
s Ceratotherium_simum.JH767749.1                          12231577  7 +  27778364 c---ag--------c-a--ag
i Ceratotherium_simum.JH767749.1                         C 0 T 173
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2604  7 -     25243 C---AG--------C-A--AG
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 T 173
s Cercocebus_atys.KQ010504.1                               4475805  7 +   4669795 c---ag--------c-a--aA
i Cercocebus_atys.KQ010504.1                             C 0 T 203
s Cercocebus_chrysogaster.k141_1540778                         309  7 +     17872 C---AG--------C-A--AA
i Cercocebus_chrysogaster.k141_1540778                   C 0 T 78
s Cercocebus_lunulatus.k141_3342297                            966  7 -     14043 c---ag--------c-a--aa
i Cercocebus_lunulatus.k141_3342297                      C 0 T 203
s Cercocebus_torquatus.k141_3057011                           8999  7 +     27781 C---AG--------C-A--AA
i Cercocebus_torquatus.k141_3057011                      C 0 T 200
s Cercopithecus_ascanius.k141_1024104                         9163  7 -     20310 c---ag--------c-a--aa
i Cercopithecus_ascanius.k141_1024104                    C 0 T 199
s Cercopithecus_cephus.k141_1078548                          12143  7 +     29689 C---AG--------C-A--AA
i Cercopithecus_cephus.k141_1078548                      C 0 T 200
s Cercopithecus_diana.k141_1150327                            6896  7 -     20078 c---ag--------c-a--aa
i Cercopithecus_diana.k141_1150327                       C 0 T 199
s Cercopithecus_hamlyni.k141_187466                          14813  7 -     27936 c---ag--------c-a--aa
i Cercopithecus_hamlyni.k141_187466                      C 0 T 193
s Cercopithecus_lowei.k141_1854285                            3683  7 -     17152 c---ag--------c-a--aa
i Cercopithecus_lowei.k141_1854285                       C 0 T 199
s Cercopithecus_albogularis.ctg5                                38817222  7 +  39242232 C---AG--------C-A--AA
i Cercopithecus_albogularis.ctg5                               C 0 T 199
s Cercopithecus_mona.ctg39                                21222914  7 -  21565898 c---ag--------c-a--aa
i Cercopithecus_mona.ctg39                               C 0 T 199
s Cercopithecus_neglectus.k141_2526306                       40032  7 -     53127 c---ag--------c-a--aa
i Cercopithecus_neglectus.k141_2526306                   C 0 T 199
s Cercopithecus_nictitans.k141_1119862                         283  7 +     13442 C---AG--------C-A--AA
i Cercopithecus_nictitans.k141_1119862                   C 0 T 103
s Cercopithecus_petaurista.k141_807961                       14832  7 -     27947 c---ag--------c-a--aa
i Cercopithecus_petaurista.k141_807961                   C 0 T 199
s Cercopithecus_pogonias.k141_822820                         14808  7 +     17596 C---AG--------C-A--AA
i Cercopithecus_pogonias.k141_822820                     C 0 T 199
s Cercopithecus_roloway.k141_2581234                           855  7 +     14005 C---AG--------C-A--AA
i Cercopithecus_roloway.k141_2581234                     C 0 T 199
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             658  7 -      8501 C---AG--------T-G--AG
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 T 157
s Cheirogaleus_major.k141_333249                             21183  7 -     52598 C---AG--------T-G--AA
i Cheirogaleus_major.k141_333249                         C 0 T 89
s Cheirogaleus_medius.k141_1055463                           16548  7 +     57038 c---ag--------t-g--aa
i Cheirogaleus_medius.k141_1055463                       C 0 T 89
s Chinchilla_lanigera.JH722012.1                           1252927  7 +   2543920 C---AT--------C-A--GG
i Chinchilla_lanigera.JH722012.1                         I 2 T 81
s Chiropotes_albinasus.k141_2206961                            260  7 -     15524 a---gg--------g-a--gg
i Chiropotes_albinasus.k141_2206961                      C 0 I 4
s Chlorocebus_aethiops.ctg25                              18428792  7 -  18827391 c---ag--------c-a--aa
i Chlorocebus_aethiops.ctg25                             C 0 T 199
s Chlorocebus_pygerythrus.k141_1025673                       15229  7 -     50209 c---ag--------c-a--aa
i Chlorocebus_pygerythrus.k141_1025673                   C 0 T 199
s Chlorocebus_sabaeus.CM001947.1                         135422229  7 + 135778131 c---ag--------C-A--AA
i Chlorocebus_sabaeus.CM001947.1                         C 0 T 199
s Choloepus_didactylus.ChoDid_scaffold_45914                 18438  7 +     19366 C---AG--------T-A--AG
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 T 159
s Choloepus_hoffmanni.KN194906.1                            173515  7 +    839153 C---AG--------T-A--AG
i Choloepus_hoffmanni.KN194906.1                         C 0 T 160
s Colobus_angolensis.KN981557.1                            1910740  7 +   2368649 c---AG--------C-A--AA
i Colobus_angolensis.KN981557.1                          C 0 T 205
s Colobus_guereza.LG01                                   199948992  7 + 200372422 C---AG--------C-A--AA
i Colobus_guereza.LG01                                   C 0 T 41
s Colobus_polykomos.k141_906115                              37274  7 +     84244 C---AG--------C-A--AA
i Colobus_polykomos.k141_906115                          C 0 T 201
s Condylura_cristata.JH655891.1                           17548217  5 -  53390261 -----a--------C-A--AA
i Condylura_cristata.JH655891.1                          C 0 T 146
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14536  7 -     20389 T---AG--------T-A--AG
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 T 165
s Cricetomys_gambianus.CriGam_scaffold_18520                 50309  5 +     63868 -----A--------T-A--AA
i Cricetomys_gambianus.CriGam_scaffold_18520             I 8 T 25
s Cricetulus_griseus.LT883664.1                           11667666  7 + 224834208 C---AG--------T-A--AG
i Cricetulus_griseus.LT883664.1                          C 0 T 13
s Crocidura_indochinensis.CroInd_scaffold_37019               3120  5 -     19598 -----G--------C-A--AG
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 T 184
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28619  7 -     87169 C---AG--------A-A--AG
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 T 159
s Ctenodactylus_gundi.CteGun_scaffold_65                    837197  7 +   1526836 C---CA--------C-A--GC
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 T 70
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35887  7 +     51376 C---AA--------C-A--AG
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 2 T 83
s Dasypus_novemcinctus.JH564415.1                            63665  7 +   2246927 c---ag--------t-A--AG
i Dasypus_novemcinctus.JH564415.1                        C 0 T 157
s Daubentonia_madagascariensis.ctg71                      12537410  7 -  12879189 C---AG--------C-A--AA
i Daubentonia_madagascariensis.ctg71                     C 0 T 97
s Desmodus_rotundus.KZ672289.1                             8630252  7 +  20541912 g---ag--------t-a--ag
i Desmodus_rotundus.KZ672289.1                           C 0 T 157
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673428  7 +   1390856 c---ag--------c-a--ag
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 T 173
s Diceros_bicornis.DicBicMic_scaffold_5955                    6180  6 +    198055 C---AG--------C-A--A-
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 T 172
s Dinomys_branickii.DinBra_scaffold_21862                    36521  7 +     67921 G---AA--------C-C--AG
i Dinomys_branickii.DinBra_scaffold_21862                I 2 T 82
s Echinops_telfairi.JH980293.1                            48780697  7 + 111700974 c---aT--------G-A--AG
i Echinops_telfairi.JH980293.1                           C 0 T 329
s Eidolon_helvum.KE759718.1                                  10653  7 +     11740 t---aa--------t-a--ag
i Eidolon_helvum.KE759718.1                              C 0 T 155
s Ellobius_lutescens.LOEQ01008920.1                          20400  7 -    110024 C---AG--------T-A--AG
i Ellobius_lutescens.LOEQ01008920.1                      C 0 T 13
s Ellobius_talpinus.LOJH01081419.1                             531  7 +      8657 C---AG--------T-A--AG
i Ellobius_talpinus.LOJH01081419.1                       C 0 T 13
s Enhydra_lutris.KZ291758.1                               16329440  7 -  41312741 c---ag--------a-a--ag
i Enhydra_lutris.KZ291758.1                              C 0 T 162
s Eptesicus_fuscus.JH977646.1                              2145855  7 -  14770903 c---aa--------t-a--ag
i Eptesicus_fuscus.JH977646.1                            C 0 T 170
s Equus_asinus.JREZ01000139.1                              1283682  7 +   4378816 c---ag--------c-a--ag
i Equus_asinus.JREZ01000139.1                            C 0 T 168
s Equus_caballus.CM000403.2                               18531502  7 -  39960074 c---ag--------c-a--ag
i Equus_caballus.CM000403.2                              C 0 T 167
s Equus_przewalskii.KK951119.1                               33531  7 +    498745 c---ag--------c-a--ag
i Equus_przewalskii.KK951119.1                           C 0 T 168
s Erinaceus_europaeus.JH835339.1                           3328360  5 -   7059049 -----a--------c-a--AG
i Erinaceus_europaeus.JH835339.1                         C 0 T 146
s Erythrocebus_patas.Contig38                             21205397  7 -  21539334 c---ag--------c-a--aa
i Erythrocebus_patas.Contig38                            C 0 T 197
s Eulemur_albifrons.k141_342033                              13895  7 -     14127 C---AG--------C-A--AA
i Eulemur_albifrons.k141_342033                          C 0 T 77
s Eulemur_collaris.k141_377015                                6609  7 -     16928 C---AG--------C-G--AA
i Eulemur_collaris.k141_377015                           C 0 T 88
s Eulemur_coronatus.k141_885031                              15641  7 -     25546 C---AG--------T-G--AA
i Eulemur_coronatus.k141_885031                          C 0 T 96
s Eulemur_flavifrons.k141_1184614                            12837  7 +     26330 C---AG--------T-G--AA
i Eulemur_flavifrons.k141_1184614                        C 0 T 88
s Eulemur_fulvus.k141_544389                                 14072  7 +     23973 c---ag--------c-a--aa
i Eulemur_fulvus.k141_544389                             C 0 T 88
s Eulemur_macaco.k141_1562045                                12834  7 +     75513 C---AG--------T-G--AA
i Eulemur_macaco.k141_1562045                            C 0 T 88
s Eulemur_mongoz.k141_232305                                 10764  7 +     97555 c---ag--------c-g--aa
i Eulemur_mongoz.k141_232305                             C 0 T 88
s Eulemur_rubriventer.k141_774594                              255  7 +     13026 c---ag--------c-g--aa
i Eulemur_rubriventer.k141_774594                        C 0 T 88
s Eulemur_rufus.k141_1476633                                  4308  7 -     17153 C---AG--------C-G--AA
i Eulemur_rufus.k141_1476633                             C 0 T 88
s Eulemur_sanfordi.k141_1122526                              13881  7 +    111500 c---ag--------c-a--aa
i Eulemur_sanfordi.k141_1122526                          C 0 T 88
s Felis_catus.CM001381.2                                  20237083  7 + 206538554 c---ag--------a-a--ag
i Felis_catus.CM001381.2                                 C 0 T 143
s Felis_catus_fca126.CM031415.1                           20195926  7 + 205367284 c---ag--------a-a--ag
i Felis_catus_fca126.CM031415.1                          C 0 T 143
s Felis_nigripes.FelNig_flattened_line_20823                  9670  7 -     36744 C---AG--------A-A--AG
i Felis_nigripes.FelNig_flattened_line_20823             C 0 T 143
s Fukomys_damarensis.KN121974.1                             850555  7 +   3816255 c---aa--------c-a--ag
i Fukomys_damarensis.KN121974.1                          I 2 T 83
s Galago_moholi.ctg2040                                     426726  7 -    453645 T---AG--------C-A--AA
i Galago_moholi.ctg2040                                  C 0 T 80
s Galago_senegalensis.k141_631886                             4416  7 +     11339 T---AG--------C-A--AA
i Galago_senegalensis.k141_631886                        C 0 T 79
s Galagoides_demidoff.k141_1711393                            1714  7 +     41679 T---AG--------C-A--AA
i Galagoides_demidoff.k141_1711393                       C 0 T 64
s Galeopterus_variegatus.GalVar_scaffold_108840               1311  7 -      9135 c---ag--------c-a--ag
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 T 115
s Glis_glis.GliGli_scaffold_19807                            31478  7 +     49224 C---AA--------C-A--GG
i Glis_glis.GliGli_scaffold_19807                        C 0 T 39
s Gorilla_beringei.k141_3596273                              16200  7 -     32273 c---ag--------t-a--aa
i Gorilla_beringei.k141_3596273                          C 0 T 217
s Gorilla_gorilla.LT578341.1                             186338337  7 + 186649187 C---AG--------T-A--AA
i Gorilla_gorilla.LT578341.1                             C 0 T 208
s Graphiurus_murinus.GraMur_scaffold_10447                   32720  7 +     78134 C---AA--------C-C--AG
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 T 40
s Hapalemur_alaotrensis.k141_170648                           6940  7 -     19426 C---AG--------T-G--AA
i Hapalemur_alaotrensis.k141_170648                      C 0 T 83
s Hapalemur_gilberti.k141_488810                             12089  7 -     15286 C---AG--------T-G--AA
i Hapalemur_gilberti.k141_488810                         C 0 T 83
s Hapalemur_griseus.k141_1511508                             13728  7 +     18253 C---AG--------T-G--AA
i Hapalemur_griseus.k141_1511508                         C 0 T 83
s Hapalemur_meridionalis.k141_248335                         13829  7 -     41752 C---AG--------T-G--AA
i Hapalemur_meridionalis.k141_248335                     C 0 T 83
s Hapalemur_occidentalis.k141_907772                         13666  7 -     16460 C---AG--------T-G--AA
i Hapalemur_occidentalis.k141_907772                     C 0 T 83
s Helogale_parvula.HelPar_flattened_line_2585               242452  7 +    327341 C---AG--------A-A--AG
i Helogale_parvula.HelPar_flattened_line_2585            C 0 T 159
s Heterocephalus_glaber.JH602082.1                        20662344  7 +  22651954 C---AA--------C-A--GG
i Heterocephalus_glaber.JH602082.1                       I 2 T 83
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1012  7 +      7595 C---CA--------A-A--AC
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 T 143
s Hoolock_leuconedys.ctg274                                    434999  7 +    630532 C---AG--------T-A--AA
i Hoolock_leuconedys.ctg274                                 C 0 T 204
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45146  7 +     55795 C---AG--------A-A--AG
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 T 159
s Hystrix_cristata.HysCri_scaffold_5660                      83233  7 +    135385 C---AA--------C-A--TG
i Hystrix_cristata.HysCri_scaffold_5660                  I 2 T 81
s Ictidomys_tridecemlineatus.JH393364.1                    7521003  6 -   7955117 ----aa--------c-a--aa
i Ictidomys_tridecemlineatus.JH393364.1                  I 7 T 87
s Indri_indri.k141_3655594                                   22629  7 +     31101 C---AG--------T-G--AA
i Indri_indri.k141_3655594                               C 0 T 93
s Jaculus_jaculus.JH725527.1                               8276912  7 -   9596543 T---AG--------C-A--AG
i Jaculus_jaculus.JH725527.1                             C 0 T 26
s Lasiurus_borealis.LasBor_scaffold_32767                    16500  7 -     42476 C---AG--------T-A--AG
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 T 2399
s Lemur_catta.scaffold_24                                 15524181  7 -  30322482 C---AG--------T-G--AA
i Lemur_catta.scaffold_24                                C 0 T 83
s Leontocebus_fuscicollis.k141_1820339                        7857  7 +     64341 C---AG--------C-C--AG
i Leontocebus_fuscicollis.k141_1820339                   C 0 T 396
s Leontocebus_illigeri.k141_1304848                            197  7 -     35062 c---ag--------c-c--ag
i Leontocebus_illigeri.k141_1304848                      C 0 T 100
s Leontocebus_nigricollis.k141_4610752                        7885  7 +     35603 C---AG--------C-C--AG
i Leontocebus_nigricollis.k141_4610752                   C 0 T 383
s Leontopithecus_chrysomelas.k141_1519602                    29301  7 +     38576 C---AG--------C-C--AG
i Leontopithecus_chrysomelas.k141_1519602                C 0 T 338
s Leontopithecus_rosalia.k141_464620                         26001  7 +     66356 C---AG--------C-C--AG
i Leontopithecus_rosalia.k141_464620                     C 0 T 341
s Lepilemur_ankaranensis.k141_596936                         11073  7 -     23766 C---AG--------T-G--AA
i Lepilemur_ankaranensis.k141_596936                     C 0 T 81
s Lepilemur_dorsalis.k141_577674                             29134  7 +     45836 C---AG--------T-G--AA
i Lepilemur_dorsalis.k141_577674                         C 0 T 81
s Lepilemur_ruficaudatus.k141_121139                          1672  7 +     25010 C---AG--------T-G--AA
i Lepilemur_ruficaudatus.k141_121139                     C 0 T 79
s Lepilemur_septentrionalis.k141_185316                      27070  7 +     54090 C---AG--------T-G--AA
i Lepilemur_septentrionalis.k141_185316                  C 0 T 81
s Leptonychotes_weddellii.KB714746.1                       3043179  7 +   3914936 c---ag--------a-a--ag
i Leptonychotes_weddellii.KB714746.1                     C 0 T 364
s Lepus_americanus.LepAme_scaffold_107385                     6601  7 -     14121 t---ag--------c-a--ag
i Lepus_americanus.LepAme_scaffold_107385                C 0 T 133
s Lophocebus_aterrimus.ctg367                              1437350  7 +   1826925 C---AG--------C-A--AA
i Lophocebus_aterrimus.ctg367                            C 0 T 201
s Loris_lydekkerianus.k141_2539221                            5975  7 +     11245 C---AG--------C-A--AA
i Loris_lydekkerianus.k141_2539221                       C 0 T 81
s Loris_tardigradus.ctg83                                  1004795  7 +   6120653 C---AG--------C-A--AA
i Loris_tardigradus.ctg83                                C 0 T 81
s Loxodonta_africana.GL010049.1                            4217445  7 -  43346337 C---AG--------G-A--CC
i Loxodonta_africana.GL010049.1                          C 0 T 148
s Lycaon_pictus.CM007581.1                                17955456  7 -  59628241 N---NN--------N-N--NG
i Lycaon_pictus.CM007581.1                               C 0 T 369
s Macaca_arctoides.k141_2326796                               7161  7 +     40492 C---AG--------C-A--AA
i Macaca_arctoides.k141_2326796                          I 108 T 202
s Macaca_assamensis.Contig5                               59676420  7 +  60120075 C---AG--------C-A--AA
i Macaca_assamensis.Contig5                              I 108 T 202
s Macaca_cyclopis.k119_18836                                 12936  7 -     26193 c---ag--------c-a--aa
i Macaca_cyclopis.k119_18836                             I 111 T 205
s Macaca_fascicularis.k141_814140                            80720  7 -    114318 c---ag--------c-a--aa
i Macaca_fascicularis.k141_814140                        I 111 T 205
s Macaca_fuscata.k119_255327                                  6407  7 -     23192 c---ag--------c-a--aa
i Macaca_fuscata.k119_255327                             I 107 T 201
s Macaca_leonina.k141_3550399                                15880  7 -     29190 c---ag--------c-a--aa
i Macaca_leonina.k141_3550399                            I 111 T 205
s Macaca_maura.k141_2733130                                  24445  7 +     37952 C---AG--------C-A--AA
i Macaca_maura.k141_2733130                              I 111 T 205
s Macaca_mulatta.NC_041758.1                             186839534  7 + 187317192 c---ag--------c-a--aa
i Macaca_mulatta.NC_041758.1                             I 111 T 205
s Macaca_nemestrina.KQ007038.1                            25458097  7 -  25927173 c---AG--------C-A--AA
i Macaca_nemestrina.KQ007038.1                           I 111 T 205
s Macaca_nigra.k141_1655396                                  80293  7 +     89720 C---AG--------C-A--AA
i Macaca_nigra.k141_1655396                              I 111 T 205
s Macaca_radiata.k141_3680011                                 7294  7 +     20474 C---AG--------C-A--AA
i Macaca_radiata.k141_3680011                            I 111 T 205
s Macaca_siberu.k141_635500                                   7094  7 -     14993 c---ag--------c-a--aa
i Macaca_siberu.k141_635500                              I 111 T 205
s Macaca_silenus.Contig273                                  329960  7 -    668171 c---ag--------c-a--aa
i Macaca_silenus.Contig273                               I 111 T 205
s Macaca_thibetana.k99_256239                                 5407  7 -     24072 c---ag--------c-a--aa
i Macaca_thibetana.k99_256239                            I 108 T 202
s Macaca_tonkeana.k141_1498238                               26032  7 -     45290 c---ag--------c-a--aa
i Macaca_tonkeana.k141_1498238                           I 111 T 205
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90746  7 +     94391 C---AG--------T-A--AG
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 T 157
s Mandrillus_leucophaeus.scaffold280                      23937625  7 -  24302211 c---ag--------c-a--aa
i Mandrillus_leucophaeus.scaffold280                     C 0 T 203
s Mandrillus_sphinx.Contig270                               351749  7 +    752769 C---AG--------C-A--AA
i Mandrillus_sphinx.Contig270                            C 0 T 199
s Manis_javanica.JSZB01003497.1                              18622 15 +    737560 c---cgaagaaaaca-a--ag
i Manis_javanica.JSZB01003497.1                          C 0 T 155
s Manis_pentadactyla.KN006162.1                              50615 15 -    317179 c---cgaagaaaaca-a--ag
i Manis_pentadactyla.KN006162.1                          C 0 T 159
s Marmota_marmota.CZRN01000018.1                          33103203  6 -  40650429 ----aa--------c-a--aa
i Marmota_marmota.CZRN01000018.1                         I 7 T 91
s Megaderma_lyra.MegLyr_scaffold_4542                        10461  7 -    207569 C---AG--------T-A--AG
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 T 155
s Mellivora_capensis.MelCap_flattened_line_69365             10177  7 +     13704 C---AG--------A-A--AG
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 T 162
s Meriones_unguiculatus.MerUng_scaffold_7390                 32847  7 +    140813 C---AG--------G-T--AA
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 T 13
s Mesocricetus_auratus.KB708134.1                         12182341  7 -  29670104 C---AG--------T-A--AG
i Mesocricetus_auratus.KB708134.1                        C 0 T 13
s Mico_argentatus.k141_1239457                                6092  7 -      7380 c---ag--------c-c--ag
i Mico_argentatus.k141_1239457                           C 0 T 353
s Mico_humeralifer.k141_2457295                                321  7 +      1079 C---AG--------C-C--AG
i Mico_humeralifer.k141_2457295                          C 0 T 324
s Mico_schneideri.k141_1950671                                      6104  7 -      7356 c---ag--------c-c--ag
i Mico_schneideri.k141_1950671                                 C 0 T 353
s Microcebus_murinus.CM007674.1                           18291606  7 -  93316391 c---ag--------t-G--AA
i Microcebus_murinus.CM007674.1                          C 0 T 88
s Microgale_talazaci.MicTal_scaffold_6613                    22446  7 -    145209 C---AT--------A-A--AA
i Microgale_talazaci.MicTal_scaffold_6613                C 0 T 331
s Micronycteris_hirsuta.MicHir_scaffold_52381                15779  7 -     19307 G---AG--------T-A--AG
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 T 157
s Microtus_ochrogaster.CM001695.1                         11260579  7 -  27267610 C---AG--------T-A--AG
i Microtus_ochrogaster.CM001695.1                        C 0 T 13
s Miniopterus_natalensis.LDJU01000034.1                    1850741  7 +   8254450 c---ag--------t-a--ag
i Miniopterus_natalensis.LDJU01000034.1                  C 0 T 143
s Miniopterus_schreibersii.MinSch_scaffold_18080             34422  7 +     64694 C---AG--------T-A--AG
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 T 143
s Miopithecus_ogouensis.k141_534055                           9329  7 -     28506 c---ag--------c-a--aa
i Miopithecus_ogouensis.k141_534055                      C 0 T 182
s Mirounga_angustirostris.MirAng_flattened_line_93702         6047  7 -      8324 C---AG--------A-A--AG
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 T 364
s Mirza_zaza.k141_952172                                      9151  7 -     37649 C---AG--------T-G--AA
i Mirza_zaza.k141_952172                                 C 0 T 88
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141751  7 -    366855 C---AG--------T-A--AG
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 T 164
s Mungos_mungo.MunMun_flattened_line_23663                   35552  7 +     37127 C---AG--------A-A--AG
i Mungos_mungo.MunMun_flattened_line_23663               C 0 T 160
s Murina_feae.MurFea_scaffold_85699                           6951  7 +     14753 C---AG--------T-A--AA
i Murina_feae.MurFea_scaffold_85699                      C 0 T 169
s Mus_caroli.LT608237.1                                   84361461  7 - 120012414 c---ag--------a-g--ag
i Mus_caroli.LT608237.1                                  C 0 T 13
s Mus_musculus.chr8                                       87650459  7 - 129401213 c---ag--------a-a--ag
i Mus_musculus.chr8                                      C 0 T 13
s Mus_pahari.LT608297.1                                   31355118  7 -  89631738 C---AG--------G-G--AG
i Mus_pahari.LT608297.1                                  C 0 T 13
s Mus_spretus.CM004101.1                                  90752520  7 - 130317789 c---ag--------a-a--ag
i Mus_spretus.CM004101.1                                 C 0 T 13
s Muscardinus_avellanarius.MusAve_scaffold_82313              5059  7 +     14296 C---AA--------C-A--AG
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 T 31
s Mustela_putorius.JH418006.1                               301590  7 -  14710649 c---ag--------a-a--ag
i Mustela_putorius.JH418006.1                            C 0 T 384
s Myocastor_coypus.MyoCoy_scaffold_10123                     71366  7 -     80779 C---CA--------T-A--AG
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 2 T 83
s Myotis_brandtii.KE162005.1                                280594  7 -  10118263 c---ag--------t-a--gg
i Myotis_brandtii.KE162005.1                             C 0 T 169
s Myotis_davidii.KB100139.1                                1587859  7 -   6019432 c---ag--------t-a--gg
i Myotis_davidii.KB100139.1                              C 0 T 166
s Myotis_lucifugus.GL429869.1                              3903948  7 -   4330536 c---ag--------t-a--gg
i Myotis_lucifugus.GL429869.1                            C 0 T 169
s Myotis_myotis.MyoMyo_scaffold_281845                          97  7 +      1835 C---AG--------T-A--GG
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 T 37
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189389  7 +    196477 C---AG--------T-A--AG
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 T 159
s Nannospalax_galili.KL204047.1                            2034182  7 -   3037898 c---aa--------a-a--ag
i Nannospalax_galili.KL204047.1                          C 0 T 28
s Nasalis_larvatus.k141_413338                               15331  7 +     21681 C---AG--------C-A--AA
i Nasalis_larvatus.k141_413338                           C 0 T 209
s Neomonachus_schauinslandi.NINY01007730.1                20307633  7 +  31847680 c---ag--------a-a--ag
i Neomonachus_schauinslandi.NINY01007730.1               C 0 T 696
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149524  7 -   9404916 c---ag--------g-a--ag
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 T 175
s Nycticebus_bengalensis.LG01                            102586339  7 - 196305487 C---AG--------C-A--AA
i Nycticebus_bengalensis.LG01                            C 0 T 80
s Nycticebus_coucang.k141_1127096                              263  7 +      2075 c---ag--------c-a--aa
i Nycticebus_coucang.k141_1127096                        C 0 T 80
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761693  7 + 199412804 C---AG--------C-A--AA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 T 80
s Ochotona_princeps.JH802162.1                             1363665  7 +   3988456 t---ag--------t-a--aa
i Ochotona_princeps.JH802162.1                           C 0 T 173
s Octodon_degus.JH651603.1                                  746976  7 +  11899542 C---AA--------C-A--AG
i Octodon_degus.JH651603.1                               I 2 T 83
s Odobenus_rosmarus.KB229312.1                              506778  7 -   2017862 c---ag--------a-a--ag
i Odobenus_rosmarus.KB229312.1                           C 0 T 156
s Ondatra_zibethicus.OndZib_scaffold_46174                   25247  7 +     28053 C---AG--------G-A--AG
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 T 13
s Onychomys_torridus.OnyTor_scaffold_2986                    80247  7 +    102263 C---AG--------T-A--AG
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 T 13
s Orycteropus_afer.OryAfe_flattened_line_144387               9965  7 -     18566 C---AG--------C-A--AG
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 T 150
s Oryctolagus_cuniculus.CM000791.1                        67147461  7 + 174332312 C---AG--------C-A--AG
i Oryctolagus_cuniculus.CM000791.1                       C 0 T 112
s Otocyon_megalotis.JAEUCK010005147.1                       462472  7 -    559221 c---ag--------g-a--ag
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 T 155
s Otolemur_crassicaudatus.k141_222918                         4246  7 +      8798 T---AG--------C-A--AA
i Otolemur_crassicaudatus.k141_222918                    C 0 T 68
s Otolemur_garnettii.GL873799.1                             696409  7 -   1103335 t---ag--------C-A--AA
i Otolemur_garnettii.GL873799.1                          C 0 T 68
s Pan_paniscus.KQ411613.1                                    44288  7 +     80009 C---GG--------T-A--AA
i Pan_paniscus.KQ411613.1                                C 0 T 212
s Pan_troglodytes.CM009242.2                             189143190  7 + 189151597 C---AG--------T-A--AA
i Pan_troglodytes.CM009242.2                             C 0 T 73
s Panthera_onca.PanOnc_flattened_line_3271                  151287  3 +    230217 ----------------A--AG
i Panthera_onca.PanOnc_flattened_line_3271               I 2 T 141
s Panthera_pardus.KV860321.1                                264496  3 +  18783137 ----------------a--ag
i Panthera_pardus.KV860321.1                             I 2 T 141
s Panthera_tigris.KE722367.1                               4721375  3 -   8748460 ----------------a--ag
i Panthera_tigris.KE722367.1                             I 2 T 141
s Papio_anubis.CM001495.2                                183443427  7 + 183742232 c---ag--------C-A--AA
i Papio_anubis.CM001495.2                                C 0 T 255
s Papio_cynocephalus.k141_4307930                             7073  7 +     20448 C---AG--------C-A--AA
i Papio_cynocephalus.k141_4307930                        C 0 T 203
s Papio_hamadryas.Contig39                                20563885  7 +  20919399 C---AG--------C-A--AA
i Papio_hamadryas.Contig39                               C 0 T 207
s Papio_kindae.k141_1936966                                   5817  7 +     41871 C---AG--------C-A--AA
i Papio_kindae.k141_1936966                              C 0 T 203
s Papio_papio.k141_802527                                     9110  7 +     27711 C---AG--------C-A--AA
i Papio_papio.k141_802527                                C 0 T 211
s Papio_ursinus.k141_3428135                                  9179  7 +      9205 C---AG--------C-A--AA
i Papio_ursinus.k141_3428135                             C 0 T 199
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12782  7 -     78924 C---AG--------A-A--AG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 T 158
s Perodicticus_ibeanus.k141_855320                           10227  6 +     13100 C---AG--------C-A--A-
i Perodicticus_ibeanus.k141_855320                       C 0 T 78
s Perodicticus_potto.k141_1092580                             8633  6 +     25941 C---AG--------C-A--A-
i Perodicticus_potto.k141_1092580                        C 0 T 78
s Peromyscus_maniculatus.KI615324.1                       18194873  7 -  18517816 C---AG--------T-A--AG
i Peromyscus_maniculatus.KI615324.1                      C 0 T 13
s Petromus_typicus.PetTyp_scaffold_42190                     28245  7 -     29689 C---TT--------C-A--AG
i Petromus_typicus.PetTyp_scaffold_42190                 I 2 T 75
s Piliocolobus_badius.k141_1234363                           43822  7 +     62158 c---ag--------c-a--aa
i Piliocolobus_badius.k141_1234363                       I 109 T 189
s Piliocolobus_gordonorum.k141_381342                        38569  7 +     89929 C---AG--------C-A--AA
i Piliocolobus_gordonorum.k141_381342                    I 109 T 205
s Piliocolobus_kirkii.k141_448987                            39985  7 +     51399 C---AG--------C-A--AA
i Piliocolobus_kirkii.k141_448987                        I 109 T 205
s Piliocolobus_tephrosceles.PDMG02000141.1                14296223  7 -  14605196 C---AG--------C-A--AA
i Piliocolobus_tephrosceles.PDMG02000141.1               I 109 T 205
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1889  7 +     22620 C---AG--------T-A--AG
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 T 160
s Pongo_abelii.CM009266.2                                189131326  7 + 189387572 c---AG--------T-A--AA
i Pongo_abelii.CM009266.2                                C 0 T 208
s Pongo_pygmaeus.ctg66                                     9570933  7 +   9816681 C---AG--------T-A--AA
i Pongo_pygmaeus.ctg66                                   C 0 T 207
s Presbytis_comata.k141_677006                               73507  7 -     81375 c---ag--------c-a--aa
i Presbytis_comata.k141_677006                           C 0 T 205
s Presbytis_mitrata.k141_1087752                              5327  7 +     19060 C---AG--------C-A--AA
i Presbytis_mitrata.k141_1087752                         C 0 T 205
s Procavia_capensis.ProCapCap_scaffold_85530                 13467  7 -     22811 C---CA--------A-A--AC
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 T 143
s Prolemur_simus.MPIZ01000396.1                            2596861  7 -   4620579 c---gG--------T-G--AA
i Prolemur_simus.MPIZ01000396.1                          C 0 T 83
s Propithecus_coquerelli.NW_012148875.1                     990847  7 +   2598838 c---ag--------T-G--AA
i Propithecus_coquerelli.NW_012148875.1                  C 0 T 88
s Propithecus_coronatus.k141_347390                          29159  7 +     38485 C---AG--------T-G--AA
i Propithecus_coronatus.k141_347390                      C 0 T 88
s Propithecus_diadema.k141_58108                              1202  7 -     13098 C---AG--------T-G--AA
i Propithecus_diadema.k141_58108                         C 0 T 88
s Propithecus_edwardsi.k141_1176054                          26680  7 +     35766 C---AG--------T-G--AA
i Propithecus_edwardsi.k141_1176054                      C 0 T 88
s Propithecus_perrieri.k141_1200571                           4867  7 -     24134 C---AG--------T-G--AA
i Propithecus_perrieri.k141_1200571                      C 0 T 88
s Propithecus_tattersalli.k141_790011                        28692  7 -     67325 C---AG--------T-G--AA
i Propithecus_tattersalli.k141_790011                    C 0 T 88
s Propithecus_verreauxi.k141_956661                           4915  7 -      6182 C---AG--------T-G--AA
i Propithecus_verreauxi.k141_956661                      C 0 T 88
s Psammomys_obesus.NESX01036370.1                            10491  7 -     21651 C---AG--------G-T--AA
i Psammomys_obesus.NESX01036370.1                        C 0 T 13
s Pteronotus_parnellii.KE909381.1                            15206  7 -     21811 a---gg--------t-a--ag
i Pteronotus_parnellii.KE909381.1                        C 0 T 166
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40367  7 +     42204 C---AG--------A-A--AG
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 T 162
s Pteropus_alecto.KB030862.1                              22976912  7 +  28871421 c---ag--------t-a--aG
i Pteropus_alecto.KB030862.1                             C 0 T 155
s Pteropus_vampyrus.KN534172.1                                6965  7 -      8028 c---ag--------t-a--aG
i Pteropus_vampyrus.KN534172.1                           C 0 T 155
s Puma_concolor.QAVW01001104.1                            20274439  7 -  38429054 c---ag--------a-a--ag
i Puma_concolor.QAVW01001104.1                           C 0 T 143
s Pygathrix_cinerea.k141_1153803                             15340  7 -     91421 c---ag--------c-a--aa
i Pygathrix_cinerea.k141_1153803                         C 0 T 209
s Pygathrix_nigripes_b.ctg100                                 7609460  7 +   7812017 C---AG--------C-A--AA
i Pygathrix_nigripes_b.ctg100                               C 0 T 209
s Pygathrix_nigripes_a.k141_215492                             15312  7 -     72585 c---ag--------c-a--aa
i Pygathrix_nigripes_a.k141_215492                         C 0 T 209
s Rattus_norvegicus.chr16                                 53570721  7 +  90668790 C---AG--------T-A--AG
i Rattus_norvegicus.chr16                                C 0 T 13
s Rhinopithecus_bieti.k119_217274                             7023  7 -     11128 c---ag--------c-a--aa
i Rhinopithecus_bieti.k119_217274                        C 0 T 206
s Rhinopithecus_roxellana.NC_044550.1                     91236372  7 - 195417433 C---AG--------C-A--AA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 T 202
s Rhinopithecus_strykeri.ctg102                            7672028  7 +   7961872 C---AG--------C-A--AA
i Rhinopithecus_strykeri.ctg102                          C 0 T 206
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87934  7 -     96226 C---GG--------T-A--AG
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 T 156
s Saguinus_bicolor.k141_8081                                   473  7 +     42994 C---AG--------C-C--AG
i Saguinus_bicolor.k141_8081                             C 0 T 100
s Saguinus_imperator.k141_57697                                258  7 +      1030 C---AG--------C-C--AG
i Saguinus_imperator.k141_57697                          C 0 T 252
s Saguinus_inustus.k141_3945547                                337  7 -      8737 c---ag--------c-c--ag
i Saguinus_inustus.k141_3945547                          C 0 T 262
s Saguinus_labiatus.k141_285685                               8502  3 +      8564 --------------a-g--a-
i Saguinus_labiatus.k141_285685                          C 0 T 114
s Saguinus_midas.LG03                                    209469824  7 + 209938924 C---AG--------C-C--AG
i Saguinus_midas.LG03                                    C 0 T 590
s Saguinus_mystax.k141_374627                                 8459  7 -      9399 c---ag--------c-c--ag
i Saguinus_mystax.k141_374627                            C 0 T 519
s Saimiri_boliviensis.NW_024100920.1                     119951197  7 - 121099817 C---AG--------C-A--AG
i Saimiri_boliviensis.NW_024100920.1                     C 0 T 345
s Saimiri_cassiquiarensis.k141_2188234                       23536  7 +     46362 C---AG--------C-A--AG
i Saimiri_cassiquiarensis.k141_2188234                   C 0 T 228
s Saimiri_macrodon.k141_716185                               23631  7 +     45824 C---AG--------C-A--AG
i Saimiri_macrodon.k141_716185                           C 0 T 228
s Saimiri_oerstedii.k141_1487881                             40310  7 -     64574 c---ag--------c-a--ag
i Saimiri_oerstedii.k141_1487881                         C 0 T 279
s Saimiri_sciureus.k141_2278166                               3382  7 -     23631 c---ag--------c-a--ag
i Saimiri_sciureus.k141_2278166                          C 0 T 345
s Saimiri_ustus.k141_1484609                                 23527  7 -     61129 c---ag--------c-a--ag
i Saimiri_ustus.k141_1484609                             C 0 T 228
s Sapajus_apella.ctg103                                    5420905  7 -   5703754 c---ag--------a-g--ag
i Sapajus_apella.ctg103                                  C 0 T 283
s Sapajus_macrocephalus.k141_351809                          56146  7 -     80660 c---ag--------a-g--ag
i Sapajus_macrocephalus.k141_351809                      C 0 T 483
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153336  5 -    313613 -----A--------C-A--AG
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 T 148
s Semnopithecus_entellus.k141_1672505                          204  7 -     12572 C---AG--------C-A--AA
i Semnopithecus_entellus.k141_1672505                    C 0 T 103
s Semnopithecus_hypoleucos.k141_1615806                      27054  7 +     39453 C---AG--------C-A--AA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 T 209
s Semnopithecus_johnii.k141_670120                            7572  7 +     27826 C---AG--------C-A--AA
i Semnopithecus_johnii.k141_670120                       C 0 T 208
s Semnopithecus_priam.k141_638794                             7094  7 -     19483 c---ag--------c-a--aa
i Semnopithecus_priam.k141_638794                        C 0 T 209
s Semnopithecus_schistaceus.k141_1572284                       395  7 -     12762 C---AG--------C-A--AA
i Semnopithecus_schistaceus.k141_1572284                 C 0 T 103
s Semnopithecus_vetulus.k141_910252                            256  7 +     13763 C---AG--------C-A--AA
i Semnopithecus_vetulus.k141_910252                      C 0 T 108
s Sigmodon_hispidus.SigHis_scaffold_60841                    11975  7 -     12148 t---ag--------a-a--aa
i Sigmodon_hispidus.SigHis_scaffold_60841                I 48 T 13
s Solenodon_paradoxus.SolPar_flattened_line_126               3886  6 +   1910179 A---AA--------A-A--A-
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 T 139
s Sorex_araneus.JH798187.1                                13651153  5 -  18376816 -----A--------C-A--AG
i Sorex_araneus.JH798187.1                               C 0 T 159
s Spermophilus_dauricus.KZ294078.1                         1954058  6 -   3870691 ----aa--------c-a--aa
i Spermophilus_dauricus.KZ294078.1                       I 7 T 91
s Spilogale_gracilis.SpiGra_flattened_line_13525             30865  7 +     97271 C---AG--------A-A--AG
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 T 159
s Suricata_suricatta.SurSur_flattened_line_6629              18455  7 -    196729 C---AG--------A-A--AG
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 T 162
s Sus_scrofa.CM000828.4                                    6810938  7 +  69701581 c---ag--------t-a--ag
i Sus_scrofa.CM000828.4                                  C 0 T 470
s Tadarida_brasiliensis.TadBra_scaffold_25820                10931  7 +     41958 C---AG--------T-A--AG
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 T 161
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72750  7 +    116680 C---GA--------T-A--AG
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 T 159
s Tapirus_indicus.TapInd_scaffold_9301                      118895  7 -    156842 C---AG--------C-G--AG
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 T 172
s Tapirus_terrestris.TapTer_scaffold_755                    387352  7 +    539355 C---AG--------C-A--AG
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 T 172
s Tarsius_lariang.k141_2201908                               26601  7 +     70052 C---AG--------C-A--AG
i Tarsius_lariang.k141_2201908                           I 109 T 203
s Tarsius_wallacei.k141_254427                                1398  7 -     16117 c---ag--------c-a--ag
i Tarsius_wallacei.k141_254427                           I 109 T 167
s Theropithecus_gelada.CM009954.1                        186428745  7 + 186847797 c---ag--------C-A--AA
i Theropithecus_gelada.CM009954.1                        C 0 T 203
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105566  7 +    114563 C---TT--------C-A--AG
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 2 T 82
s Tolypeutes_matacus.TolMat_scaffold_228639                   6534  7 +      8208 C---AG--------T-A--AG
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 T 160
s Tonatia_saurophila.TonSau_scaffold_294                     81325  7 +    610378 G---AG--------T-A--AG
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 T 164
s Trachypithecus_auratus.k141_722599                         11145  7 -     20410 c---ag--------c-a--aa
i Trachypithecus_auratus.k141_722599                     C 0 T 209
s Trachypithecus_crepusculus.k141_582567                       259  7 -     12674 c---ag--------c-a--aa
i Trachypithecus_crepusculus.k141_582567                 C 0 T 209
s Trachypithecus_cristatus.k141_580354                       11246  7 +     19930 C---AG--------C-A--AA
i Trachypithecus_cristatus.k141_580354                   C 0 T 209
s Trachypithecus_francoisi.k141_1412647                       7657  7 -     19997 c---ag--------c-a--aa
i Trachypithecus_francoisi.k141_1412647                  C 0 T 193
s Trachypithecus_geei.k141_277701                            47796  7 -     60166 c---ag--------c-a--aa
i Trachypithecus_geei.k141_277701                        C 0 T 208
s Trachypithecus_germaini.k141_912491                        15268  7 -     27529 c---ag--------c-a--aa
i Trachypithecus_germaini.k141_912491                    C 0 T 209
s Trachypithecus_hatinhensis.k141_143409                     15212  7 -     18194 c---ag--------c-a--Aa
i Trachypithecus_hatinhensis.k141_143409                 C 0 T 209
s Trachypithecus_laotum.k141_907409                           8924  7 -     21137 c---ag--------c-a--AA
i Trachypithecus_laotum.k141_907409                      C 0 T 193
s Trachypithecus_leucocephalus.k141_587342                    7627  7 -     10723 c---ag--------c-a--aa
i Trachypithecus_leucocephalus.k141_587342               C 0 T 193
s Trachypithecus_melamera.k141_434728                         6799  7 +      9834 C---AG--------C-A--AA
i Trachypithecus_melamera.k141_434728                    C 0 T 209
s Trachypithecus_obscurus.k141_190785                        25112  7 +     32220 C---AG--------C-A--AA
i Trachypithecus_obscurus.k141_190785                    C 0 T 209
s Trachypithecus_phayrei.ctg124                            5939214  7 +   6242583 C---AG--------C-A--AA
i Trachypithecus_phayrei.ctg124                          C 0 T 209
s Trachypithecus_pileatus.k141_2007326                        8465  7 +     20839 C---AG--------C-A--AA
i Trachypithecus_pileatus.k141_2007326                   C 0 T 208
s Trichechus_manatus.JH594705.1                            4293366  7 +  10818551 c---aG--------G-A--AG
i Trichechus_manatus.JH594705.1                          C 0 T 143
s Tupaia_chinensis.KB320699.1                              2155708  7 +   4065304 C---AG--------C-A--AG
i Tupaia_chinensis.KB320699.1                            C 0 T 63
s Tupaia_tana.TupTan_flattened_line_97126                     9361  7 -     10553 C---GG--------C-A--AG
i Tupaia_tana.TupTan_flattened_line_97126                C 0 T 65
s Uropsilus_gracilis.UroGra_scaffold_12083                   53433  5 -     77625 -----A--------C-A--AG
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 T 139
s Ursus_maritimus.KK499267.1                               4850567  7 -   5085361 c---aa--------a-a--ag
i Ursus_maritimus.KK499267.1                             C 0 T 156
s Varecia_rubra.k141_590885                                  11526  7 +     50397 C---AG--------T-G--AA
i Varecia_rubra.k141_590885                              C 0 T 88
s Varecia_variegata.k141_1128296                             11585  7 +     24756 C---AG--------T-G--AA
i Varecia_variegata.k141_1128296                         C 0 T 88
s Vicugna_pacos.KN270157.1                                 5372019  7 -   5488506 c---aG--------T-A--AG
i Vicugna_pacos.KN270157.1                               C 0 T 170
s Vulpes_lagopus.VulLag_flattened_line_30954                 10920  7 -     43706 C---AG--------G-A--AG
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 T 158
s Xerus_inauris.XerIna_scaffold_2302                          1186  6 +    224448 ----aA--------C-A--AG
i Xerus_inauris.XerIna_scaffold_2302                     I 7 T 79
s Zalophus_californianus.ZalCal_flattened_line_17732          5496  7 +     86975 c---ag--------a-a--ag
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 T 161
s Zapus_hudsonius.ZapHud_scaffold_11398                      15008  7 +     63895 C---AG--------C-A--TG
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 T 26
e Alouatta_seniculus.k141_117119                             14962 136 +     50774 T
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Elephantulus_edwardii.JH947257.1                         1097781 85 +  10337057 T
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6838 4 +     62944 a-aga
s Acinonyx_jubatus.LLWD01001279.1                           827296 2 -   1699592 A-T--
i Acinonyx_jubatus.LLWD01001279.1                        T 143 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510557 2 -  29979442 A-T--
i Ailuropoda_melanoleuca.LNAT01000098.1                  T 156 C 0
s Ailurus_fulgens.LNAC01001112.1                             79327 2 -    347723 A-T--
i Ailurus_fulgens.LNAC01001112.1                         T 162 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     74592 2 -     89534 A-C--
i Allactaga_bullata.AllBul_scaffold_9566                 T 26 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14664 4 -     52922 a-cca
i Allenopithecus_nigroviridis.k141_3361533               T 218 I 112
s Allochrocebus_lhoesti.k141_4309873                         14600 4 -     28001 a-cca
i Allochrocebus_lhoesti.k141_4309873                     T 197 I 92
s Allochrocebus_preussi.k141_1442296                          5096 4 -     18505 a-cca
i Allochrocebus_preussi.k141_1442296                     T 199 I 92
s Allochrocebus_solatus.k141_166128                           5950 4 -     12518 a-cca
i Allochrocebus_solatus.k141_166128                      T 197 I 92
s Alouatta_belzebul.k141_3560514                              7416 4 +     51355 A-CCA
i Alouatta_belzebul.k141_3560514                         T 110 I 112
s Alouatta_caraya.k141_1701091                                 538 4 -     36483 a-cca
i Alouatta_caraya.k141_1701091                           T 105 I 108
s Alouatta_discolor.k141_743489                               3602 4 -     45847 A-CCA
i Alouatta_discolor.k141_743489                          T 21 C 0
s Alouatta_juara.k141_1509701                                24807 4 +     25266 A-CCA
i Alouatta_juara.k141_1509701                            T 106 I 109
s Alouatta_macconnelli.k141_918386                             532 4 -      9457 a-cca
i Alouatta_macconnelli.k141_918386                       T 102 I 105
s Alouatta_nigerrima.k141_3472759                            18110 4 -     18578 a-cca
i Alouatta_nigerrima.k141_3472759                        T 110 I 113
s Alouatta_palliata.k141_2135620                              3509 4 +     47717 A-CCA
i Alouatta_palliata.k141_2135620                         T 98 I 102
s Alouatta_puruensis.k141_362188                               206 4 +      5663 A-CCA
i Alouatta_puruensis.k141_362188                         T 106 I 109
s Alouatta_seniculus.k141_117119                             14826 4 +     50774 A-CCA
i Alouatta_seniculus.k141_117119                         T 136 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185322 2 +    412891 A-C--
i Anoura_caudifer.AnoCau_scaffold_1412                   T 163 C 0
s Aotus_azarae.k141_3104676                                  15451 4 -     33861 a-cca
i Aotus_azarae.k141_3104676                              T 86 I 82
s Aotus_griseimembra.k141_2240599                            15471 4 -     34016 a-cca
i Aotus_griseimembra.k141_2240599                        T 98 I 94
s Aotus_nancymaae.KZ198451.1                               4297868 4 -   5030052 A-CCA
i Aotus_nancymaae.KZ198451.1                             T 94 I 90
s Aotus_trivirgatus.k141_2152450                             15473 4 -     34685 a-cca
i Aotus_trivirgatus.k141_2152450                         T 98 I 94
s Aotus_vociferans.k141_344750                               28597 4 -     47192 a-cca
i Aotus_vociferans.k141_344750                           T 98 I 94
s Aplodontia_rufa.AprRuf_scaffold_68852                      12656 2 +     20879 A-C--
i Aplodontia_rufa.AprRuf_scaffold_68852                  T 81 C 0
s Arctocebus_calabarensis.k141_2318572                       11519 2 +     14667 C-C--
i Arctocebus_calabarensis.k141_2318572                   T 70 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4731 2 +     43469 A-C--
i Artibeus_jamaicensis.ArtJam_scaffold_25439             T 162 C 0
s Avahi_laniger.k141_765380                                  53722 2 -     92717 A-C--
i Avahi_laniger.k141_765380                              T 98 C 0
s Avahi_peyrierasi.k141_1424874                              54349 2 +     85213 A-C--
i Avahi_peyrierasi.k141_1424874                          T 93 C 0
s Callibella_humilis.k141_1278103                             5206 4 -     10423 a-cca
i Callibella_humilis.k141_1278103                        T 379 I 93
s Callimico_goeldii.k141_1091182                             24678 4 +     31915 A-CCA
i Callimico_goeldii.k141_1091182                         T 376 I 97
s Callithrix_geoffroyi.k119_512088                            5172 4 +      5267 A-CCA
i Callithrix_geoffroyi.k119_512088                       T 93 I 89
s Callithrix_jacchus.pat_scaffold_3                       23590386 4 - 189096842 a-cca
i Callithrix_jacchus.pat_scaffold_3                      T 353 I 89
s Callithrix_kuhlii.k119_1164682                             11917 4 -     12001 A-CCA
i Callithrix_kuhlii.k119_1164682                         T 84 C 0
s Camelus_bactrianus.KN276810.1                           10002353 2 -  17673402 A-C--
i Camelus_bactrianus.KN276810.1                          T 173 C 0
s Camelus_dromedarius.KN272107.1                           2334811 2 -   7040546 A-C--
i Camelus_dromedarius.KN272107.1                         T 173 C 0
s Camelus_ferus.KB017975.1                                  403094 2 -   1652518 A-C--
i Camelus_ferus.KB017975.1                               T 174 C 0
s CanFam4.chr16                                           17799146 2 -  60362399 A-T--
i CanFam4.chr16                                          T 158 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    185203 2 -    185531 A-T--
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 T 135 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034589 2 -   9314153 A-T--
i Canis_lupus_dingo.QKWQ01000480.1                       T 158 C 0
s Canis_lupus_familiaris.chr16                            17958854 2 -  59632846 A-T--
i Canis_lupus_familiaris.chr16                           T 369 C 0
s Canis_lupus_orion.HG994398.1                            18500366 2 +  63665305 A-T--
i Canis_lupus_orion.HG994398.1                           T 158 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1104 2 -     12242 T-C--
i Capromys_pilorides.CapPil_scaffold_65020               T 82 C 0
s Carlito_syrichta.NW_007247396.1                           201398 4 +    308752 A-CCA
i Carlito_syrichta.NW_007247396.1                        T 80 I 85
s Carollia_perspicillata.CarPer_scaffold_92756                5089 2 -     11696 A-C--
i Carollia_perspicillata.CarPer_scaffold_92756           T 153 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     92983 2 +    217609 A-C--
i Catagonus_wagneri.CatWag_scaffold_2839                 T 214 C 0
s Cebuella_niveiventris.k141_1251222                          9831 4 -     11392 a-cca
i Cebuella_niveiventris.k141_1251222                     T 389 I 89
s Cebuella_pygmaea.k141_1309012                               5929 4 -      7577 a-cca
i Cebuella_pygmaea.k141_1309012                          T 359 I 89
s Cebus_albifrons.Contig27                                25651958 4 +  26074798 a-cca
i Cebus_albifrons.Contig27                               T 999 I 657
s Cebus_olivaceus.k141_398305                                 1534 4 +      1777 A-CCA
i Cebus_olivaceus.k141_398305                            T 162 C 0
s Cebus_unicolor.k141_544048                                 49871 4 -     74725 a-cca
i Cebus_unicolor.k141_544048                             T 164 C 0
s Cephalopachus_bancanus.k141_1423433                         5403 4 +     31688 a-cca
i Cephalopachus_bancanus.k141_1423433                    T 212 I 96
s Ceratotherium_simum.JH767749.1                          12231411 2 +  27778364 A-C--
i Ceratotherium_simum.JH767749.1                         T 173 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2438 2 -     25243 A-C--
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      T 173 C 0
s Cercocebus_atys.KQ010504.1                               4475609 4 +   4669795 A-CCA
i Cercocebus_atys.KQ010504.1                             T 203 I 88
s Cercocebus_chrysogaster.k141_393940                        14154 4 -     19203 A-Cca
i Cercocebus_chrysogaster.k141_393940                    T 77 I 88
s Cercocebus_lunulatus.k141_3342297                            770 4 -     14043 a-cca
i Cercocebus_lunulatus.k141_3342297                      T 203 I 88
s Cercocebus_torquatus.k141_3057011                           8806 4 +     27781 A-CCA
i Cercocebus_torquatus.k141_3057011                      T 200 I 88
s Cercopithecus_ascanius.k141_1024104                         8971 4 -     20310 a-cca
i Cercopithecus_ascanius.k141_1024104                    T 199 I 92
s Cercopithecus_cephus.k141_1078548                          11950 4 +     29689 A-CCA
i Cercopithecus_cephus.k141_1078548                      T 200 I 92
s Cercopithecus_diana.k141_1150327                            6704 4 -     20078 a-cca
i Cercopithecus_diana.k141_1150327                       T 199 I 92
s Cercopithecus_hamlyni.k141_187466                          14627 4 -     27936 a-cca
i Cercopithecus_hamlyni.k141_187466                      T 193 I 92
s Cercopithecus_lowei.k141_1854285                            3491 4 -     17152 a-cca
i Cercopithecus_lowei.k141_1854285                       T 199 I 92
s Cercopithecus_albogularis.ctg5                                38817030 4 +  39242232 A-CCA
i Cercopithecus_albogularis.ctg5                               T 199 I 92
s Cercopithecus_mona.ctg39                                21222722 4 -  21565898 a-cca
i Cercopithecus_mona.ctg39                               T 199 I 92
s Cercopithecus_neglectus.k141_2526306                       39840 4 -     53127 a-cca
i Cercopithecus_neglectus.k141_2526306                   T 199 I 92
s Cercopithecus_nictitans.k141_1119848                          91 4 +     27489 A-CCA
i Cercopithecus_nictitans.k141_1119848                   T 27 C 0
s Cercopithecus_petaurista.k141_807961                       14640 4 -     27947 a-cca
i Cercopithecus_petaurista.k141_807961                   T 199 I 92
s Cercopithecus_pogonias.k141_822820                         14616 4 +     17596 A-CCA
i Cercopithecus_pogonias.k141_822820                     T 199 I 92
s Cercopithecus_roloway.k141_2581234                           663 4 +     14005 A-CCA
i Cercopithecus_roloway.k141_2581234                     T 199 I 92
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             508 2 -      8501 A-C--
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       T 157 C 0
s Cheirogaleus_major.k141_333249                             21101 2 -     52598 A-C--
i Cheirogaleus_major.k141_333249                         T 89 C 0
s Cheirogaleus_medius.k141_1055463                           16466 2 +     57038 A-C--
i Cheirogaleus_medius.k141_1055463                       T 89 C 0
s Chinchilla_lanigera.JH722012.1                           1252853 2 +   2543920 T-C--
i Chinchilla_lanigera.JH722012.1                         T 81 C 0
s Chiropotes_albinasus.k141_2813271                          11083 4 +     11226 A-CCA
i Chiropotes_albinasus.k141_2813271                      T 43 C 0
s Chlorocebus_aethiops.ctg25                              18428600 4 -  18827391 a-cca
i Chlorocebus_aethiops.ctg25                             T 199 I 92
s Chlorocebus_pygerythrus.k141_1025673                       15037 4 -     50209 a-cca
i Chlorocebus_pygerythrus.k141_1025673                   T 199 I 92
s Chlorocebus_sabaeus.CM001947.1                         135422037 4 + 135778131 A-CCA
i Chlorocebus_sabaeus.CM001947.1                         T 199 I 92
s Choloepus_didactylus.ChoDid_scaffold_45914                 18286 2 +     19366 G-C--
i Choloepus_didactylus.ChoDid_scaffold_45914             T 159 C 0
s Choloepus_hoffmanni.KN194906.1                            173362 2 +    839153 G-C--
i Choloepus_hoffmanni.KN194906.1                         T 160 C 0
s Colobus_angolensis.KN981557.1                            1910542 4 +   2368649 A-CCA
i Colobus_angolensis.KN981557.1                          T 205 I 96
s Colobus_polykomos.k141_906115                              37080 4 +     84244 A-CCA
i Colobus_polykomos.k141_906115                          T 201 I 92
s Condylura_cristata.JH655891.1                           17548076 2 -  53390261 A-C--
i Condylura_cristata.JH655891.1                          T 146 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14378 2 -     20389 A-C--
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      T 165 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 50289 2 +     63868 a-c--
i Cricetomys_gambianus.CriGam_scaffold_18520             T 25 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               2941 2 -     19598 A-T--
i Crocidura_indochinensis.CroInd_scaffold_37019          T 184 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28467 2 -     87169 A-T--
i Cryptoprocta_ferox.CryFer_flattened_line_16129         T 159 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837134 2 +   1526836 A-C--
i Ctenodactylus_gundi.CteGun_scaffold_65                 T 70 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35811 2 +     51376 T-C--
i Ctenomys_sociabilis.CteSoc_scaffold_29687              T 83 C 0
s Dasypus_novemcinctus.JH564415.1                            63515 2 +   2246927 A-C--
i Dasypus_novemcinctus.JH564415.1                        T 157 C 0
s Daubentonia_madagascariensis.ctg71                      12537320 2 -  12879189 A-C--
i Daubentonia_madagascariensis.ctg71                     T 97 C 0
s Desmodus_rotundus.KZ672289.1                             8630102 2 +  20541912 A-C--
i Desmodus_rotundus.KZ672289.1                           T 157 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673262 2 +   1390856 A-C--
i Dicerorhinus_sumatrensis.PEKH010002091.1               T 173 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6014 2 +    198055 A-C--
i Diceros_bicornis.DicBicMic_scaffold_5955               T 172 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36446 2 +     67921 T-C--
i Dinomys_branickii.DinBra_scaffold_21862                T 82 C 0
s Echinops_telfairi.JH980293.1                            48780375 2 + 111700974 A-C--
i Echinops_telfairi.JH980293.1                           T 329 C 0
s Eidolon_helvum.KE759718.1                                  10505 2 +     11740 A-C--
i Eidolon_helvum.KE759718.1                              T 155 C 0
s Elephantulus_edwardii.JH947257.1                         1097696 2 +  10337057 A-C--
i Elephantulus_edwardii.JH947257.1                       T 85 I 2
s Enhydra_lutris.KZ291758.1                               16329285 2 -  41312741 A-T--
i Enhydra_lutris.KZ291758.1                              T 162 C 0
s Eptesicus_fuscus.JH977646.1                              2145692 2 -  14770903 A-C--
i Eptesicus_fuscus.JH977646.1                            T 170 C 0
s Equus_asinus.JREZ01000139.1                              1283521 2 +   4378816 A-C--
i Equus_asinus.JREZ01000139.1                            T 168 I 2
s Equus_caballus.CM000403.2                               18531342 2 -  39960074 A-C--
i Equus_caballus.CM000403.2                              T 167 I 2
s Equus_przewalskii.KK951119.1                               33370 2 +    498745 A-C--
i Equus_przewalskii.KK951119.1                           T 168 I 2
s Erinaceus_europaeus.JH835339.1                           3328219 2 -   7059049 A-T--
i Erinaceus_europaeus.JH835339.1                         T 146 C 0
s Erythrocebus_patas.Contig38                             21205207 4 -  21539334 a-cca
i Erythrocebus_patas.Contig38                            T 197 I 92
s Eulemur_albifrons.k141_342033                              13825 2 -     14127 T-C--
i Eulemur_albifrons.k141_342033                          T 77 C 0
s Eulemur_collaris.k141_377015                                6528 2 -     16928 T-C--
i Eulemur_collaris.k141_377015                           T 88 C 0
s Eulemur_coronatus.k141_885031                              15552 2 -     25546 T-C--
i Eulemur_coronatus.k141_885031                          T 96 C 0
s Eulemur_flavifrons.k141_1184614                            12756 2 +     26330 T-C--
i Eulemur_flavifrons.k141_1184614                        T 88 C 0
s Eulemur_fulvus.k141_544389                                 13991 2 +     23973 T-C--
i Eulemur_fulvus.k141_544389                             T 88 C 0
s Eulemur_macaco.k141_1562045                                12753 2 +     75513 T-C--
i Eulemur_macaco.k141_1562045                            T 88 C 0
s Eulemur_mongoz.k141_232305                                 10683 2 +     97555 T-C--
i Eulemur_mongoz.k141_232305                             T 88 C 0
s Eulemur_rubriventer.k141_774594                              174 2 +     13026 T-C--
i Eulemur_rubriventer.k141_774594                        T 88 C 0
s Eulemur_rufus.k141_1476633                                  4227 2 -     17153 T-C--
i Eulemur_rufus.k141_1476633                             T 88 C 0
s Eulemur_sanfordi.k141_1122526                              13800 2 +    111500 T-C--
i Eulemur_sanfordi.k141_1122526                          T 88 C 0
s Felis_catus.CM001381.2                                  20236947 2 + 206538554 A-T--
i Felis_catus.CM001381.2                                 T 143 C 0
s Felis_catus_fca126.CM031415.1                           20195790 2 + 205367284 A-T--
i Felis_catus_fca126.CM031415.1                          T 143 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  9534 2 -     36744 A-T--
i Felis_nigripes.FelNig_flattened_line_20823             T 143 C 0
s Fukomys_damarensis.KN121974.1                             850479 3 +   3816255 TTA--
i Fukomys_damarensis.KN121974.1                          T 83 C 0
s Galago_moholi.ctg2040                                     426653 2 -    453645 A-T--
i Galago_moholi.ctg2040                                  T 80 C 0
s Galago_senegalensis.k141_631886                             4344 2 +     11339 A-T--
i Galago_senegalensis.k141_631886                        T 79 C 0
s Galagoides_demidoff.k141_1711393                            1657 2 +     41679 A-C--
i Galagoides_demidoff.k141_1711393                       T 64 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1203 2 -      9135 A-C--
i Galeopterus_variegatus.GalVar_scaffold_108840          T 115 C 0
s Gorilla_beringei.k141_3596273                              15990 4 -     32273 A-CCA
i Gorilla_beringei.k141_3596273                          T 217 I 103
s Gorilla_gorilla.LT578341.1                             186338136 4 + 186649187 A-CCA
i Gorilla_gorilla.LT578341.1                             T 208 C 0
s Hapalemur_alaotrensis.k141_170648                           6864 2 -     19426 A-C--
i Hapalemur_alaotrensis.k141_170648                      T 83 C 0
s Hapalemur_gilberti.k141_488810                             12013 2 -     15286 A-C--
i Hapalemur_gilberti.k141_488810                         T 83 C 0
s Hapalemur_griseus.k141_1511508                             13652 2 +     18253 A-C--
i Hapalemur_griseus.k141_1511508                         T 83 C 0
s Hapalemur_meridionalis.k141_248335                         13753 2 -     41752 A-C--
i Hapalemur_meridionalis.k141_248335                     T 83 C 0
s Hapalemur_occidentalis.k141_907772                         13590 2 -     16460 A-C--
i Hapalemur_occidentalis.k141_907772                     T 83 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242300 2 +    327341 A-T--
i Helogale_parvula.HelPar_flattened_line_2585            T 159 C 0
s Heterocephalus_glaber.JH602082.1                        20662268 2 +  22651954 T-C--
i Heterocephalus_glaber.JH602082.1                       T 83 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                 876 2 +      7595 A-T--
i Heterohyrax_brucei.HetBruBak_scaffold_122365           T 143 C 0
s Hoolock_leuconedys.ctg274                                    434802 4 +    630532 A-CCA
i Hoolock_leuconedys.ctg274                                 T 204 I 103
s Hyaena_hyaena.HyaHya_flattened_line_26932                  44994 2 +     55795 A-T--
i Hyaena_hyaena.HyaHya_flattened_line_26932              T 159 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83159 2 +    135385 T-C--
i Hystrix_cristata.HysCri_scaffold_5660                  T 81 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7520922 2 -   7955117 A-C--
i Ictidomys_tridecemlineatus.JH393364.1                  T 87 C 0
s Indri_indri.k141_3655594                                   22543 2 +     31101 A-C--
i Indri_indri.k141_3655594                               T 93 C 0
s Jaculus_jaculus.JH725527.1                               8276893 2 -   9596543 A-A--
i Jaculus_jaculus.JH725527.1                             T 26 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    14108 2 -     42476 A-C--
i Lasiurus_borealis.LasBor_scaffold_32767                T 2399 C 0
s Lemur_catta.scaffold_24                                 15524105 2 -  30322482 A-C--
i Lemur_catta.scaffold_24                                T 83 C 0
s Leontocebus_fuscicollis.k141_1820339                        7468 4 +     64341 A-CCA
i Leontocebus_fuscicollis.k141_1820339                   T 396 I 114
s Leontocebus_illigeri.k141_3350179                           4791 4 +      4941 A-CCA
i Leontocebus_illigeri.k141_3350179                      T 108 I 118
s Leontocebus_nigricollis.k141_4610752                        7509 4 +     35603 A-CCA
i Leontocebus_nigricollis.k141_4610752                   T 383 I 118
s Leontopithecus_chrysomelas.k141_1519602                    28970 4 +     38576 A-CCA
i Leontopithecus_chrysomelas.k141_1519602                T 338 I 89
s Leontopithecus_rosalia.k141_464620                         25667 4 +     66356 A-CCA
i Leontopithecus_rosalia.k141_464620                     T 341 I 89
s Lepilemur_ankaranensis.k141_596936                         10999 2 -     23766 A-C--
i Lepilemur_ankaranensis.k141_596936                     T 81 C 0
s Lepilemur_dorsalis.k141_577674                             29060 2 +     45836 A-C--
i Lepilemur_dorsalis.k141_577674                         T 81 C 0
s Lepilemur_ruficaudatus.k141_121139                          1600 2 +     25010 A-C--
i Lepilemur_ruficaudatus.k141_121139                     T 79 C 0
s Lepilemur_septentrionalis.k141_185316                      26996 2 +     54090 A-C--
i Lepilemur_septentrionalis.k141_185316                  T 81 C 0
s Leptonychotes_weddellii.KB714746.1                       3042822 2 +   3914936 A-T--
i Leptonychotes_weddellii.KB714746.1                     T 364 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6475 2 -     14121 A-C--
i Lepus_americanus.LepAme_scaffold_107385                T 133 C 0
s Lophocebus_aterrimus.ctg367                              1437156 4 +   1826925 A-CCA
i Lophocebus_aterrimus.ctg367                            T 201 I 84
s Loris_lydekkerianus.k141_2539221                            5901 2 +     11245 A-C--
i Loris_lydekkerianus.k141_2539221                       T 81 C 0
s Loris_tardigradus.ctg83                                  1004721 2 +   6120653 A-C--
i Loris_tardigradus.ctg83                                T 81 C 0
s Loxodonta_africana.GL010049.1                            4217304 2 -  43346337 A-C--
i Loxodonta_africana.GL010049.1                          T 148 C 0
s Lycaon_pictus.CM007581.1                                17955094 2 -  59628241 A-T--
i Lycaon_pictus.CM007581.1                               T 369 C 0
s Macaca_arctoides.k141_2326796                               6966 4 +     40492 A-CCA
i Macaca_arctoides.k141_2326796                          T 202 I 93
s Macaca_assamensis.Contig5                               59676225 4 +  60120075 A-CCA
i Macaca_assamensis.Contig5                              T 202 I 93
s Macaca_cyclopis.k119_18836                                 12738 4 -     26193 a-cca
i Macaca_cyclopis.k119_18836                             T 205 I 93
s Macaca_fascicularis.k141_814140                            80522 4 -    114318 a-cca
i Macaca_fascicularis.k141_814140                        T 205 I 93
s Macaca_fuscata.k119_255327                                  6213 4 -     23192 a-cca
i Macaca_fuscata.k119_255327                             T 201 I 93
s Macaca_leonina.k141_3550399                                15682 4 -     29190 a-cca
i Macaca_leonina.k141_3550399                            T 205 I 93
s Macaca_maura.k141_2733130                                  24247 4 +     37952 A-CCA
i Macaca_maura.k141_2733130                              T 205 I 93
s Macaca_mulatta.NC_041758.1                             186839336 4 + 187317192 A-CCA
i Macaca_mulatta.NC_041758.1                             T 205 I 93
s Macaca_nemestrina.KQ007038.1                            25457899 4 -  25927173 A-CCA
i Macaca_nemestrina.KQ007038.1                           T 205 I 93
s Macaca_nigra.k141_1655396                                  80095 4 +     89720 A-CCA
i Macaca_nigra.k141_1655396                              T 205 I 93
s Macaca_radiata.k141_3680011                                 7096 4 +     20474 A-CCA
i Macaca_radiata.k141_3680011                            T 205 I 93
s Macaca_siberu.k141_635500                                   6896 4 -     14993 A-cca
i Macaca_siberu.k141_635500                              T 205 I 93
s Macaca_silenus.Contig273                                  329762 4 -    668171 a-cca
i Macaca_silenus.Contig273                               T 205 I 93
s Macaca_thibetana.k99_256239                                 5212 4 -     24072 A-CCA
i Macaca_thibetana.k99_256239                            T 202 I 93
s Macaca_tonkeana.k141_1498238                               25834 4 -     45290 a-cca
i Macaca_tonkeana.k141_1498238                           T 205 I 93
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90596 2 +     94391 A-C--
i Macroglossus_sobrinus.MacSob_scaffold_8222             T 157 C 0
s Mandrillus_leucophaeus.scaffold280                      23937429 4 -  24302211 a-cca
i Mandrillus_leucophaeus.scaffold280                     T 203 I 88
s Mandrillus_sphinx.Contig270                               351557 4 +    752769 A-CCA
i Mandrillus_sphinx.Contig270                            T 199 I 84
s Manis_javanica.JSZB01003497.1                              18482 2 +    737560 A-C--
i Manis_javanica.JSZB01003497.1                          T 155 C 0
s Manis_pentadactyla.KN006162.1                              50471 2 -    317179 A-C--
i Manis_pentadactyla.KN006162.1                          T 159 C 0
s Marmota_marmota.CZRN01000018.1                          33103118 2 -  40650429 A-C--
i Marmota_marmota.CZRN01000018.1                         T 91 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        10313 2 -    207569 A-C--
i Megaderma_lyra.MegLyr_scaffold_4542                    T 155 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10022 2 +     13704 A-T--
i Mellivora_capensis.MelCap_flattened_line_69365         T 162 C 0
s Mico_argentatus.k141_1239457                                5746 4 -      7380 a-cca
i Mico_argentatus.k141_1239457                           T 353 I 89
s Mico_humeralifer.k141_1976199                               4819 4 +     18990 A-CCA
i Mico_humeralifer.k141_1976199                          T 81 C 0
s Mico_schneideri.k141_1950671                                      5758 4 -      7356 a-cca
i Mico_schneideri.k141_1950671                                 T 353 I 89
s Microcebus_murinus.CM007674.1                           18291525 2 -  93316391 A-C--
i Microcebus_murinus.CM007674.1                          T 88 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    22122 2 -    145209 A-C--
i Microgale_talazaci.MicTal_scaffold_6613                T 331 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                15629 2 -     19307 A-C--
i Micronycteris_hirsuta.MicHir_scaffold_52381            T 157 C 0
s Miopithecus_ogouensis.k141_534055                           9154 4 -     28506 A-cca
i Miopithecus_ogouensis.k141_534055                      T 182 I 76
s Mirounga_angustirostris.MirAng_flattened_line_93702         5690 2 -      8324 A-T--
i Mirounga_angustirostris.MirAng_flattened_line_93702    T 364 C 0
s Mirza_zaza.k141_952172                                      9070 2 -     37649 A-C--
i Mirza_zaza.k141_952172                                 T 88 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141594 2 -    366855 A-C--
i Mormoops_blainvillei.MorMeg_scaffold_1417              T 164 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35399 2 +     37127 A-T--
i Mungos_mungo.MunMun_flattened_line_23663               T 160 C 0
s Murina_feae.MurFea_scaffold_85699                           6789 2 +     14753 A-C--
i Murina_feae.MurFea_scaffold_85699                      T 169 C 0
s Mustela_putorius.JH418006.1                               301213 2 -  14710649 A-T--
i Mustela_putorius.JH418006.1                            T 384 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71290 2 -     80779 T-C--
i Myocastor_coypus.MyoCoy_scaffold_10123                 T 83 C 0
s Myotis_brandtii.KE162005.1                                280432 2 -  10118263 A-C--
i Myotis_brandtii.KE162005.1                             T 169 C 0
s Myotis_davidii.KB100139.1                                1587700 2 -   6019432 A-C--
i Myotis_davidii.KB100139.1                              T 166 C 0
s Myotis_lucifugus.GL429869.1                              3903786 2 -   4330536 A-C--
i Myotis_lucifugus.GL429869.1                            T 169 C 0
s Myotis_myotis.MyoMyo_scaffold_482318                         460 2 -       721 A-C--
i Myotis_myotis.MyoMyo_scaffold_482318                   T 66 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189237 2 +    196477 A-C--
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           T 159 C 0
s Nannospalax_galili.KL204047.1                            2034161 2 -   3037898 A-C--
i Nannospalax_galili.KL204047.1                          T 28 C 0
s Nasalis_larvatus.k141_413338                               15129 4 +     21681 A-CCA
i Nasalis_larvatus.k141_413338                           T 209 I 96
s Neomonachus_schauinslandi.NINY01007730.1                20306944 2 +  31847680 A-T--
i Neomonachus_schauinslandi.NINY01007730.1               T 696 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149356 2 -   9404916 A-T--
i Nyctereutes_procyonoides.CAJHUB010000658.1             T 175 C 0
s Nycticebus_bengalensis.LG01                            102586266 2 - 196305487 A-C--
i Nycticebus_bengalensis.LG01                            T 80 C 0
s Nycticebus_coucang.k141_1127096                              190 2 +      2075 A-C--
i Nycticebus_coucang.k141_1127096                        T 80 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761620 2 + 199412804 A-C--
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       T 80 C 0
s Ochotona_princeps.JH802162.1                             1363499 1 +   3988456 A----
i Ochotona_princeps.JH802162.1                           T 173 C 0
s Octodon_degus.JH651603.1                                  746900 2 +  11899542 T-C--
i Octodon_degus.JH651603.1                               T 83 C 0
s Odobenus_rosmarus.KB229312.1                              506629 2 -   2017862 A-C--
i Odobenus_rosmarus.KB229312.1                           T 156 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9822 2 -     18566 A-C--
i Orycteropus_afer.OryAfe_flattened_line_144387          T 150 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147356 2 + 174332312 A-C--
i Oryctolagus_cuniculus.CM000791.1                       T 112 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462324 2 -    559221 A-T--
i Otocyon_megalotis.JAEUCK010005147.1                    T 155 C 0
s Otolemur_crassicaudatus.k141_222918                         4185 2 +      8798 A-C--
i Otolemur_crassicaudatus.k141_222918                    T 68 C 0
s Otolemur_garnettii.GL873799.1                             696348 2 -   1103335 A-C--
i Otolemur_garnettii.GL873799.1                          T 68 C 0
s Pan_paniscus.KQ411613.1                                    44083 4 +     80009 A-CCA
i Pan_paniscus.KQ411613.1                                T 212 I 99
s Pan_troglodytes.NBAG03001836.1                             30008 4 +     51860 A-CCA
i Pan_troglodytes.NBAG03001836.1                         T 188 I 16
s Panthera_onca.PanOnc_flattened_line_3271                  151149 2 +    230217 A-T--
i Panthera_onca.PanOnc_flattened_line_3271               T 141 C 0
s Panthera_pardus.KV860321.1                                264358 2 +  18783137 A-T--
i Panthera_pardus.KV860321.1                             T 141 C 0
s Panthera_tigris.KE722367.1                               4721237 2 -   8748460 A-T--
i Panthera_tigris.KE722367.1                             T 141 C 0
s Papio_anubis.CM001495.2                                183443179 4 + 183742232 A-CCA
i Papio_anubis.CM001495.2                                T 255 I 140
s Papio_cynocephalus.k141_4307930                             6877 4 +     20448 A-CCA
i Papio_cynocephalus.k141_4307930                        T 203 I 88
s Papio_hamadryas.Contig39                                20563685 4 +  20919399 A-CCA
i Papio_hamadryas.Contig39                               T 207 I 92
s Papio_kindae.k141_1936966                                   5621 4 +     41871 A-CCA
i Papio_kindae.k141_1936966                              T 203 I 88
s Papio_papio.k141_802527                                     8906 4 +     27711 A-CCA
i Papio_papio.k141_802527                                T 211 I 96
s Papio_ursinus.k141_3428135                                  8987 4 +      9205 A-CCA
i Papio_ursinus.k141_3428135                             T 199 I 84
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12631 2 -     78924 A-T--
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 T 158 C 0
s Perodicticus_ibeanus.k141_855320                           10155 2 +     13100 A-C--
i Perodicticus_ibeanus.k141_855320                       T 78 C 0
s Perodicticus_potto.k141_1092580                             8561 2 +     25941 A-T--
i Perodicticus_potto.k141_1092580                        T 78 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28177 2 -     29689 T-C--
i Petromus_typicus.PetTyp_scaffold_42190                 T 75 C 0
s Piliocolobus_badius.k141_1234363                           43640 4 +     62158 A-CCA
i Piliocolobus_badius.k141_1234363                       T 189 I 80
s Piliocolobus_gordonorum.k141_381342                        38371 4 +     89929 A-CCA
i Piliocolobus_gordonorum.k141_381342                    T 205 I 96
s Piliocolobus_kirkii.k141_448987                            39787 4 +     51399 A-CCA
i Piliocolobus_kirkii.k141_448987                        T 205 I 96
s Piliocolobus_tephrosceles.PDMG02000141.1                14296025 4 -  14605196 A-CCA
i Piliocolobus_tephrosceles.PDMG02000141.1               T 205 I 96
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1736 2 +     22620 A-C--
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        T 160 C 0
s Pongo_abelii.CM009266.2                                189131125 4 + 189387572 A-CCA
i Pongo_abelii.CM009266.2                                T 208 I 99
s Pongo_pygmaeus.ctg66                                     9570733 4 +   9816681 A-CCA
i Pongo_pygmaeus.ctg66                                   T 207 I 97
s Presbytis_comata.k141_677006                               73309 4 -     81375 a-cca
i Presbytis_comata.k141_677006                           T 205 I 92
s Presbytis_mitrata.k141_1087752                              5129 4 +     19060 A-CCA
i Presbytis_mitrata.k141_1087752                         T 205 I 92
s Procavia_capensis.ProCapCap_scaffold_85530                 13331 2 -     22811 A-C--
i Procavia_capensis.ProCapCap_scaffold_85530             T 143 C 0
s Prolemur_simus.MPIZ01000396.1                            2596785 2 -   4620579 A-C--
i Prolemur_simus.MPIZ01000396.1                          T 83 C 0
s Propithecus_coquerelli.NW_012148875.1                     990766 2 +   2598838 A-C--
i Propithecus_coquerelli.NW_012148875.1                  T 88 C 0
s Propithecus_coronatus.k141_347390                          29078 2 +     38485 A-C--
i Propithecus_coronatus.k141_347390                      T 88 C 0
s Propithecus_diadema.k141_58108                              1121 2 -     13098 A-C--
i Propithecus_diadema.k141_58108                         T 88 C 0
s Propithecus_edwardsi.k141_1176054                          26599 2 +     35766 A-C--
i Propithecus_edwardsi.k141_1176054                      T 88 C 0
s Propithecus_perrieri.k141_1200571                           4786 2 -     24134 A-C--
i Propithecus_perrieri.k141_1200571                      T 88 C 0
s Propithecus_tattersalli.k141_790011                        28611 2 -     67325 A-C--
i Propithecus_tattersalli.k141_790011                    T 88 C 0
s Propithecus_verreauxi.k141_956661                           4834 2 -      6182 A-C--
i Propithecus_verreauxi.k141_956661                      T 88 C 0
s Pteronotus_parnellii.KE909381.1                            15047 2 -     21811 A-C--
i Pteronotus_parnellii.KE909381.1                        T 166 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40212 2 +     42204 A-T--
i Pteronura_brasiliensis.PteBra_flattened_line_31117     T 162 C 0
s Pteropus_alecto.KB030862.1                              22976764 2 +  28871421 A-C--
i Pteropus_alecto.KB030862.1                             T 155 C 0
s Pteropus_vampyrus.KN534172.1                                6817 2 -      8028 A-C--
i Pteropus_vampyrus.KN534172.1                           T 155 C 0
s Puma_concolor.QAVW01001104.1                            20274303 2 -  38429054 A-T--
i Puma_concolor.QAVW01001104.1                           T 143 C 0
s Pygathrix_cinerea.k141_1153803                             15138 4 -     91421 a-cca
i Pygathrix_cinerea.k141_1153803                         T 209 I 96
s Pygathrix_nigripes_b.ctg100                                 7609258 4 +   7812017 A-CCA
i Pygathrix_nigripes_b.ctg100                               T 209 I 96
s Pygathrix_nigripes_a.k141_215492                             15110 4 -     72585 a-cca
i Pygathrix_nigripes_a.k141_215492                         T 209 I 96
s Rhinopithecus_bieti.k119_217274                             6824 4 -     11128 A-CCA
i Rhinopithecus_bieti.k119_217274                        T 206 I 95
s Rhinopithecus_roxellana.NC_044550.1                     91236177 4 - 195417433 A-CCA
i Rhinopithecus_roxellana.NC_044550.1                    T 202 I 89
s Rhinopithecus_strykeri.ctg102                            7671829 4 +   7961872 A-CCA
i Rhinopithecus_strykeri.ctg102                          T 206 I 95
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87785 2 -     96226 A-C--
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            T 156 C 0
s Saguinus_bicolor.k141_2619299                               8145 4 -      8359 a-cca
i Saguinus_bicolor.k141_2619299                          T 105 I 114
s Saguinus_imperator.k141_2524406                             2103 4 +      2197 A-CCA
i Saguinus_imperator.k141_2524406                        T 94 C 0
s Saguinus_inustus.k141_699149                               13522 4 +     13640 A-CCA
i Saguinus_inustus.k141_699149                           T 108 C 0
s Saguinus_labiatus.k141_285685                               8391 4 +      8564 A-CCA
i Saguinus_labiatus.k141_285685                          T 114 I 114
s Saguinus_midas.LG03                                    209469241 4 + 209938924 A-CGA
i Saguinus_midas.LG03                                    T 590 I 106
s Saguinus_mystax.k141_374627                                 7947 4 -      9399 a-cca
i Saguinus_mystax.k141_374627                            T 519 I 114
s Saimiri_boliviensis.NW_024100920.1                     119950859 4 - 121099817 A-CCA
i Saimiri_boliviensis.NW_024100920.1                     T 345 I 53
s Saimiri_cassiquiarensis.k141_2188234                       23315 4 +     46362 A-CCA
i Saimiri_cassiquiarensis.k141_2188234                   T 228 C 0
s Saimiri_macrodon.k141_716185                               23410 4 +     45824 A-CCA
i Saimiri_macrodon.k141_716185                           T 228 C 0
s Saimiri_oerstedii.k141_1487881                             40038 4 -     64574 a-cca
i Saimiri_oerstedii.k141_1487881                         T 279 I 53
s Saimiri_sciureus.k141_2278166                               3044 4 -     23631 a-cca
i Saimiri_sciureus.k141_2278166                          T 345 I 53
s Saimiri_ustus.k141_1484609                                 23306 4 -     61129 a-cca
i Saimiri_ustus.k141_1484609                             T 228 I 53
s Sapajus_apella.ctg103                                    5420629 4 -   5703754 a-cca
i Sapajus_apella.ctg103                                  T 283 I 168
s Sapajus_macrocephalus.k141_351809                          55670 4 -     80660 a-cca
i Sapajus_macrocephalus.k141_351809                      T 483 I 170
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153193 2 -    313613 A-C--
i Scalopus_aquaticus.ScaAqu_scaffold_662                 T 148 C 0
s Semnopithecus_entellus.k141_11662                          19649 4 -     19888 A-CCA
i Semnopithecus_entellus.k141_11662                      T 84 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26852 4 +     39453 A-CCA
i Semnopithecus_hypoleucos.k141_1615806                  T 209 I 96
s Semnopithecus_johnii.k141_670120                            7371 4 +     27826 A-CCA
i Semnopithecus_johnii.k141_670120                       T 208 I 96
s Semnopithecus_priam.k141_638794                             6892 4 -     19483 a-cca
i Semnopithecus_priam.k141_638794                        T 209 I 96
s Semnopithecus_schistaceus.k141_1584426                      6960 4 +      7198 A-CCA
i Semnopithecus_schistaceus.k141_1584426                 T 84 C 0
s Semnopithecus_vetulus.k141_1200928                         15218 4 +     15514 A-CCA
i Semnopithecus_vetulus.k141_1200928                     T 86 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               3753 2 +   1910179 A-C--
i Solenodon_paradoxus.SolPar_flattened_line_126          T 139 C 0
s Sorex_araneus.JH798187.1                                13650999 2 -  18376816 A-G--
i Sorex_araneus.JH798187.1                               T 159 C 0
s Spermophilus_dauricus.KZ294078.1                         1953973 2 -   3870691 A-C--
i Spermophilus_dauricus.KZ294078.1                       T 91 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30713 2 +     97271 A-T--
i Spilogale_gracilis.SpiGra_flattened_line_13525         T 159 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              18300 2 -    196729 A-T--
i Suricata_suricatta.SurSur_flattened_line_6629          T 162 C 0
s Sus_scrofa.CM000828.4                                    6810475 2 +  69701581 A-C--
i Sus_scrofa.CM000828.4                                  T 470 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                10777 2 +     41958 A-T--
i Tadarida_brasiliensis.TadBra_scaffold_25820            T 161 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72598 2 +    116680 A-C--
i Tamandua_tetradactyla.TamTet_scaffold_1782             T 159 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118730 2 -    156842 A-C--
i Tapirus_indicus.TapInd_scaffold_9301                   T 172 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387187 2 +    539355 A-C--
i Tapirus_terrestris.TapTer_scaffold_755                 T 172 C 0
s Tarsius_lariang.k141_2201908                               26405 4 +     70052 a-cca
i Tarsius_lariang.k141_2201908                           T 203 I 93
s Tarsius_wallacei.k141_254427                                1238 4 -     16117 a-cca
i Tarsius_wallacei.k141_254427                           T 167 I 57
s Theropithecus_gelada.CM009954.1                        186428549 4 + 186847797 A-CCA
i Theropithecus_gelada.CM009954.1                        T 203 I 88
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105491 2 +    114563 T-C--
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           T 82 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   6381 2 +      8208 A-C--
i Tolypeutes_matacus.TolMat_scaffold_228639              T 160 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81168 2 +    610378 A-C--
i Tonatia_saurophila.TonSau_scaffold_294                 T 164 C 0
s Trachypithecus_auratus.k141_722599                         10943 4 -     20410 A-Cca
i Trachypithecus_auratus.k141_722599                     T 209 I 96
s Trachypithecus_crepusculus.k141_582567                        57 4 -     12674 a-cca
i Trachypithecus_crepusculus.k141_582567                 T 209 I 96
s Trachypithecus_cristatus.k141_580354                       11044 4 +     19930 A-CCA
i Trachypithecus_cristatus.k141_580354                   T 209 I 96
s Trachypithecus_francoisi.k141_1412647                       7471 4 -     19997 A-CCA
i Trachypithecus_francoisi.k141_1412647                  T 193 I 80
s Trachypithecus_geei.k141_277701                            47595 4 -     60166 a-cca
i Trachypithecus_geei.k141_277701                        T 208 I 95
s Trachypithecus_germaini.k141_912491                        15066 4 -     27529 A-cca
i Trachypithecus_germaini.k141_912491                    T 209 I 96
s Trachypithecus_hatinhensis.k141_143409                     15010 4 -     18194 A-Cca
i Trachypithecus_hatinhensis.k141_143409                 T 209 I 96
s Trachypithecus_laotum.k141_907409                           8738 4 -     21137 A-cca
i Trachypithecus_laotum.k141_907409                      T 193 I 80
s Trachypithecus_leucocephalus.k141_587342                    7441 4 -     10723 A-CCA
i Trachypithecus_leucocephalus.k141_587342               T 193 I 80
s Trachypithecus_melamera.k141_434728                         6597 4 +      9834 A-CCA
i Trachypithecus_melamera.k141_434728                    T 209 I 96
s Trachypithecus_obscurus.k141_190785                        24910 4 +     32220 A-CCA
i Trachypithecus_obscurus.k141_190785                    T 209 I 96
s Trachypithecus_phayrei.ctg124                            5939012 4 +   6242583 A-CCA
i Trachypithecus_phayrei.ctg124                          T 209 I 96
s Trachypithecus_pileatus.k141_2007326                        8264 4 +     20839 A-CCA
i Trachypithecus_pileatus.k141_2007326                   T 208 I 95
s Trichechus_manatus.JH594705.1                            4293230 2 +  10818551 a-c--
i Trichechus_manatus.JH594705.1                          T 143 C 0
s Tupaia_chinensis.KB320699.1                              2155652 2 +   4065304 A-C--
i Tupaia_chinensis.KB320699.1                            T 63 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9303 2 -     10553 A-C--
i Tupaia_tana.TupTan_flattened_line_97126                T 65 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   53299 2 -     77625 A-C--
i Uropsilus_gracilis.UroGra_scaffold_12083               T 139 C 0
s Ursus_maritimus.KK499267.1                               4850418 2 -   5085361 A-T--
i Ursus_maritimus.KK499267.1                             T 156 C 0
s Varecia_rubra.k141_590885                                  11445 2 +     50397 A-C--
i Varecia_rubra.k141_590885                              T 88 C 0
s Varecia_variegata.k141_1128296                             11504 2 +     24756 A-C--
i Varecia_variegata.k141_1128296                         T 88 C 0
s Vicugna_pacos.KN270157.1                                 5371856 2 -   5488506 A-C--
i Vicugna_pacos.KN270157.1                               T 170 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10769 2 -     43706 A-T--
i Vulpes_lagopus.VulLag_flattened_line_30954             T 158 C 0
s Xerus_inauris.XerIna_scaffold_2302                          1113 2 +    224448 A-C--
i Xerus_inauris.XerIna_scaffold_2302                     T 79 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          5342 2 +     86975 A-T--
i Zalophus_californianus.ZalCal_flattened_line_17732     T 161 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      14989 2 +     63895 A-C--
i Zapus_hudsonius.ZapHud_scaffold_11398                  T 26 C 0
e Mus_pahari.LT608297.1                                   31355125 13 -  89631738 T
e Mus_spretus.CM004101.1                                  90752527 13 - 130317789 T
e Mus_musculus.chr8                                       87650466 13 - 129401213 T
e Mus_caroli.LT608237.1                                   84361468 13 - 120012414 T
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sigmodon_hispidus.SigHis_scaffold_60841                    11982 13 -     12148 T
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570728 13 +  90668790 T
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Psammomys_obesus.NESX01036370.1                            10498 13 -     21651 T
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Peromyscus_maniculatus.KI615324.1                       18194880 13 -  18517816 T
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80254 13 +    102263 T
e Ondatra_zibethicus.OndZib_scaffold_46174                   25254 13 +     28053 T
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              5066 31 +     14296 T
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             34429 143 +     64694 T
e Miniopterus_natalensis.LDJU01000034.1                    1850748 143 +   8254450 T
e Microtus_ochrogaster.CM001695.1                         11260586 13 -  27267610 T
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182348 13 -  29670104 T
e Meriones_unguiculatus.MerUng_scaffold_7390                 32854 13 +    140813 T
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32727 40 +     78134 T
e Glis_glis.GliGli_scaffold_19807                            31485 39 +     49224 T
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Ellobius_talpinus.LOJH01081419.1                             538 13 +      8657 T
e Ellobius_lutescens.LOEQ01008920.1                          20407 13 -    110024 T
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cricetulus_griseus.LT883664.1                           11667673 13 + 224834208 T
e Colobus_guereza.LG01                                   199948999 41 + 200372422 T
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Castor_canadensis.CasCan_scaffold_2074                    137204 66 +    179628 T
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     70906 13 +     87051 T

a score=0.000000
s hg38.chrUn_KI270753v1                                       6842 16 +     62944 aagaga----------a----a-aaa--gac--ca
s Allenopithecus_nigroviridis.k141_3361533                   14780 11 -     52922 ta---a----------t----a-aaa--aac----
i Allenopithecus_nigroviridis.k141_3361533               I 112 T 123
s Allochrocebus_lhoesti.k141_4309873                         14696 11 -     28001 ta---a----------t----a-aaa--gac----
i Allochrocebus_lhoesti.k141_4309873                     I 92 T 103
s Allochrocebus_preussi.k141_1442296                          5192 11 -     18505 ta---a----------c----a-aaa--gac----
i Allochrocebus_preussi.k141_1442296                     I 92 T 103
s Allochrocebus_solatus.k141_166128                           6046 11 -     12518 ta---a----------c----a-aaa--gac----
i Allochrocebus_solatus.k141_166128                      I 92 T 103
s Alouatta_belzebul.k141_3560514                              7532 16 +     51355 aa---g-aag------g----a-aag--aca--gg
i Alouatta_belzebul.k141_3560514                         I 112 T 128
s Alouatta_caraya.k141_1701091                                 650 16 -     36483 aa---g-a--ca----g----g-aag--gaa--gg
i Alouatta_caraya.k141_1701091                           I 108 T 123
s Alouatta_discolor.k141_566626                              11092 16 +     28687 aa---g-aa--a----g----a-aag--aca--gg
i Alouatta_discolor.k141_566626                          I 6 T 26
s Alouatta_juara.k141_1509701                                24920 16 +     25266 aa---g-a--ca----g----g-aag--gaa--gg
i Alouatta_juara.k141_1509701                            I 109 T 125
s Alouatta_macconnelli.k141_918386                             641 10 -      9457 aa---g-a--ca----g----g-aa----------
i Alouatta_macconnelli.k141_918386                       I 105 T 115
s Alouatta_nigerrima.k141_3472759                            18227 10 -     18578 aa---g-a--ca----g----g-aa----------
i Alouatta_nigerrima.k141_3472759                        I 113 T 123
s Alouatta_palliata.k141_2135620                              3615  8 +     47717 -----------------------gaa--gga--aa
i Alouatta_palliata.k141_2135620                         I 102 T 110
s Alouatta_puruensis.k141_362188                               319 16 +      5663 aa---g-a--ca----g----g-aag--gaa--gg
i Alouatta_puruensis.k141_362188                         I 109 T 125
s Aotus_azarae.k141_3104676                                  15537  6 -     33861 -------------------------a--ggg--ag
i Aotus_azarae.k141_3104676                              I 82 T 88
s Aotus_griseimembra.k141_2240599                            15569  6 -     34016 -------------------------a--ggg--ag
i Aotus_griseimembra.k141_2240599                        I 94 T 100
s Aotus_nancymaae.KZ198451.1                               4297962  6 -   5030052 -------------------------a--ggg--ag
i Aotus_nancymaae.KZ198451.1                             I 90 T 96
s Aotus_trivirgatus.k141_2152450                             15571  6 -     34685 -------------------------a--ggg--ag
i Aotus_trivirgatus.k141_2152450                         I 94 T 100
s Aotus_vociferans.k141_344750                               28695  6 -     47192 -------------------------a--ggg--ag
i Aotus_vociferans.k141_344750                           I 94 T 100
s Callibella_humilis.k141_1278103                             5303 14 -     10423 -a---a----------gga--g-gaa--gga--ag
i Callibella_humilis.k141_1278103                        I 93 T 107
s Callimico_goeldii.k141_1091182                             24779 15 +     31915 ga---g----------g-aa-g-gaa--gga--ag
i Callimico_goeldii.k141_1091182                         I 97 T 112
s Callithrix_geoffroyi.k119_512088                            5265  2 +      5267 -a---G-----------------------------
i Callithrix_geoffroyi.k119_512088                       I 89 T 91
s Callithrix_jacchus.pat_scaffold_3                       23590479 14 - 189096842 -a---g----------g-aa-g-gaa--ggg--aa
i Callithrix_jacchus.pat_scaffold_3                      I 89 T 103
s Carlito_syrichta.NW_007247396.1                           201487  4 +    308752 aa---A----------A------------------
i Carlito_syrichta.NW_007247396.1                        I 85 T 89
s Cebuella_niveiventris.k141_1251222                          9924 14 -     11392 -a---g----------g-aa-g-gaa--ggg--aa
i Cebuella_niveiventris.k141_1251222                     I 89 T 103
s Cebuella_pygmaea.k141_1309012                               6022 14 -      7577 -a---g----------g-aa-g-gaa--ggg--aa
i Cebuella_pygmaea.k141_1309012                          I 89 T 103
s Cebus_albifrons.Contig27                                25652619 17 +  26074798 aa---a----------g-aa-g-gaa--ggaggag
i Cebus_albifrons.Contig27                               I 657 T 674
s Cebus_olivaceus.k141_1764483                                 575 15 +     28840 aa---a----------g-aa-g-gaa--gga--aa
i Cebus_olivaceus.k141_1764483                           T 320 I 206
s Cebus_unicolor.k141_1837183                                  305 15 +     14051 ga---g----------gga--g-gga--ggg--aa
i Cebus_unicolor.k141_1837183                            T 315 I 205
s Cephalopachus_bancanus.k141_1423433                         5503 15 +     31688 aa---g----------agaatg-agg--ga----g
i Cephalopachus_bancanus.k141_1423433                    I 96 T 111
s Cercocebus_atys.KQ010504.1                               4475701 13 +   4669795 ta---a----------t----a-aaa--gac--aa
i Cercocebus_atys.KQ010504.1                             I 88 T 101
s Cercocebus_chrysogaster.k141_393940                        14246 10 -     19203 ta---a----------t----a-a-----aa--ga
i Cercocebus_chrysogaster.k141_393940                    I 88 T 98
s Cercocebus_lunulatus.k141_3342297                            862 13 -     14043 ta---a----------t----a-aaa--gac--aa
i Cercocebus_lunulatus.k141_3342297                      I 88 T 101
s Cercocebus_torquatus.k141_3057011                           8898 13 +     27781 ta---a----------t----a-aaa--gac--aa
i Cercocebus_torquatus.k141_3057011                      I 88 T 101
s Cercopithecus_ascanius.k141_1024104                         9067 11 -     20310 ta---a----------t----a-aaa--aac----
i Cercopithecus_ascanius.k141_1024104                    I 92 T 103
s Cercopithecus_cephus.k141_1078548                          12046 12 +     29689 ta---a----------t----aaaaa--aac----
i Cercopithecus_cephus.k141_1078548                      I 92 T 104
s Cercopithecus_diana.k141_1150327                            6800 11 -     20078 TA---A----------T----A-AAA--GAC----
i Cercopithecus_diana.k141_1150327                       I 92 T 103
s Cercopithecus_hamlyni.k141_187466                          14723 11 -     27936 ta---a----------t----a-aaa--aac----
i Cercopithecus_hamlyni.k141_187466                      I 92 T 103
s Cercopithecus_lowei.k141_1854285                            3587 11 -     17152 ta---a----------t----a-aaa--aac----
i Cercopithecus_lowei.k141_1854285                       I 92 T 103
s Cercopithecus_albogularis.ctg5                                38817126 11 +  39242232 ta---a----------t----a-aaa--aac----
i Cercopithecus_albogularis.ctg5                               I 92 T 103
s Cercopithecus_mona.ctg39                                21222818 11 -  21565898 ta---a----------t----a-aaa--aac----
i Cercopithecus_mona.ctg39                               I 92 T 103
s Cercopithecus_neglectus.k141_2526306                       39936 11 -     53127 ta---a----------t----a-aaA--AAC----
i Cercopithecus_neglectus.k141_2526306                   I 92 T 103
s Cercopithecus_nictitans.k141_1119862                         187 11 +     13442 ta---a----------t----a-aaa--aac----
i Cercopithecus_nictitans.k141_1119862                   T 103 I 18
s Cercopithecus_petaurista.k141_807961                       14736 11 -     27947 ta---a----------t----a-aaa--aac----
i Cercopithecus_petaurista.k141_807961                   I 92 T 103
s Cercopithecus_pogonias.k141_822820                         14712 11 +     17596 ta---a----------t----a-aaa--aac----
i Cercopithecus_pogonias.k141_822820                     I 92 T 103
s Cercopithecus_roloway.k141_2581234                           759 11 +     14005 ta---a----------t----a-aaa--gac----
i Cercopithecus_roloway.k141_2581234                     I 92 T 103
s Chiropotes_albinasus.k141_2206961                            271 23 -     15524 aa---ggaaggaaggaa----g-gaa--gga--ag
i Chiropotes_albinasus.k141_2206961                      I 4 T 137
s Chlorocebus_aethiops.ctg25                              18428696 11 -  18827391 ta---a----------t----a-aaa--gat----
i Chlorocebus_aethiops.ctg25                             I 92 T 103
s Chlorocebus_pygerythrus.k141_1025673                       15133 11 -     50209 ta---a----------t----a-aaa--gac----
i Chlorocebus_pygerythrus.k141_1025673                   I 92 T 103
s Chlorocebus_sabaeus.CM001947.1                         135422133 11 + 135778131 ta---a----------t----a-aaa--gac----
i Chlorocebus_sabaeus.CM001947.1                         I 92 T 103
s Colobus_angolensis.KN981557.1                            1910642 13 +   2368649 ga---a----------t----a-aaa--gac--aa
i Colobus_angolensis.KN981557.1                          I 96 T 109
s Colobus_polykomos.k141_906115                              37176 13 +     84244 ga---a----------t----a-aaa--gac--aa
i Colobus_polykomos.k141_906115                          I 92 T 105
s Erythrocebus_patas.Contig38                             21205303 11 -  21539334 ta---a----------t----a-aaa--gac----
i Erythrocebus_patas.Contig38                            I 92 T 103
s Gorilla_beringei.k141_3596273                              16097 16 -     32273 aagaga----------a----a-aaa--gac--aa
i Gorilla_beringei.k141_3596273                          I 103 T 119
s Gorilla_gorilla.CYUI03001204.1                             13696 16 -     63219 aagaga----------a----a-aaa--gac--aa
i Gorilla_gorilla.CYUI03001204.1                         I 5068 I 294
s Hoolock_leuconedys.ctg274                                    434909 12 +    630532 aa--------------a----a-aaa--gac--aa
i Hoolock_leuconedys.ctg274                                 I 103 T 115
s Leontocebus_fuscicollis.k141_1820339                        7586 13 +     64341 ga---a----------a----g-gga--gga--aa
i Leontocebus_fuscicollis.k141_1820339                   I 114 T 127
s Leontocebus_illigeri.k141_3350179                           4913 13 +      4941 ga---a----------a----g-gga--gga--aa
i Leontocebus_illigeri.k141_3350179                      I 118 T 131
s Leontocebus_nigricollis.k141_4610752                        7631 13 +     35603 ga---a----------a----g-gga--gga--aa
i Leontocebus_nigricollis.k141_4610752                   I 118 T 131
s Leontopithecus_chrysomelas.k141_1519602                    29063 13 +     38576 ga---g----------g----g-agg--gga--aa
i Leontopithecus_chrysomelas.k141_1519602                I 89 T 102
s Leontopithecus_rosalia.k141_464620                         25760 13 +     66356 ga---g----------g----g-agg--aga--aa
i Leontopithecus_rosalia.k141_464620                     I 89 T 102
s Lophocebus_aterrimus.ctg367                              1437244 15 +   1826925 ta---a----------t----a-aaaaagac--aa
i Lophocebus_aterrimus.ctg367                            I 84 T 99
s Macaca_arctoides.k141_2326796                               7063 12 +     40492 -a---a----------t----a-aaa--gac--aa
i Macaca_arctoides.k141_2326796                          I 93 T 105
s Macaca_assamensis.Contig5                               59676322 12 +  60120075 -a---a----------t----a-aaa--gac--aa
i Macaca_assamensis.Contig5                              I 93 T 99
s Macaca_cyclopis.k119_18836                                 12835 12 -     26193 -a---a----------t----a-aaa--gac--aa
i Macaca_cyclopis.k119_18836                             I 93 T 105
s Macaca_fascicularis.k141_814140                            80619 12 -    114318 -a---a----------t----a-aaa--gac--aa
i Macaca_fascicularis.k141_814140                        I 93 T 105
s Macaca_fuscata.k119_255327                                  6310 12 -     23192 -a---a----------t----a-aaa--gac--ag
i Macaca_fuscata.k119_255327                             I 93 T 105
s Macaca_leonina.k141_3550399                                15779 12 -     29190 -a---a----------t----a-aaa--gac--aa
i Macaca_leonina.k141_3550399                            I 93 T 105
s Macaca_maura.k141_2733130                                  24344 12 +     37952 -a---a----------t----a-aaa--gac--aa
i Macaca_maura.k141_2733130                              I 93 T 105
s Macaca_mulatta.NC_041758.1                             186839433 12 + 187317192 -a---a----------t----a-aaa--gac--aa
i Macaca_mulatta.NC_041758.1                             I 93 T 105
s Macaca_nemestrina.KQ007038.1                            25457996 12 -  25927173 -a---a----------t----a-aaa--gac--aa
i Macaca_nemestrina.KQ007038.1                           I 93 T 105
s Macaca_nigra.k141_1655396                                  80192 12 +     89720 -a---a----------t----a-aaa--gac--aa
i Macaca_nigra.k141_1655396                              I 93 T 105
s Macaca_radiata.k141_3680011                                 7193 12 +     20474 -a---a----------t----a-aaa--gac--aa
i Macaca_radiata.k141_3680011                            I 93 T 105
s Macaca_siberu.k141_635500                                   6993 12 -     14993 -a---a----------t----a-aaa--gac--aa
i Macaca_siberu.k141_635500                              I 93 T 105
s Macaca_silenus.Contig273                                  329859 12 -    668171 -a---a----------t----a-aaa--gac--aa
i Macaca_silenus.Contig273                               I 93 T 105
s Macaca_thibetana.k99_256239                                 5309 12 -     24072 -a---a----------t----a-aaa--gac--aa
i Macaca_thibetana.k99_256239                            I 93 T 105
s Macaca_tonkeana.k141_1498238                               25931 12 -     45290 -a---a----------t----a-aaa--gac--aa
i Macaca_tonkeana.k141_1498238                           I 93 T 105
s Mandrillus_leucophaeus.scaffold280                      23937521 13 -  24302211 ta---a----------t----a-aaa--gac--aa
i Mandrillus_leucophaeus.scaffold280                     I 88 T 101
s Mandrillus_sphinx.Contig270                               351645 13 +    752769 ta---a----------t----a-aaa--gac--aa
i Mandrillus_sphinx.Contig270                            I 84 T 97
s Mico_argentatus.k141_1239457                                5839 14 -      7380 -a---a----------gga--g-gaa--gga--ag
i Mico_argentatus.k141_1239457                           I 89 T 103
s Mico_humeralifer.k141_2457295                                  4 14 +      1079 -A---G----------G--GGA-GAA--GAA--Aa
i Mico_humeralifer.k141_2457295                          T 324 I 214
s Mico_schneideri.k141_1950671                                      5851 14 -      7356 -a---a----------gga--g-gaa--gga--ag
i Mico_schneideri.k141_1950671                                 I 89 T 103
s Miopithecus_ogouensis.k141_534055                           9234 11 -     28506 ta---a----------t----a-aaa--aac----
i Miopithecus_ogouensis.k141_534055                      I 76 T 87
s Nasalis_larvatus.k141_413338                               15229 13 +     21681 ta---a----------t----a-aaa--gac--aa
i Nasalis_larvatus.k141_413338                           I 96 T 109
s Pan_paniscus.KQ411613.1                                    44186 16 +     80009 aagaga----------a----a-aaa--gac--ca
i Pan_paniscus.KQ411613.1                                I 99 T 115
s Pan_troglodytes.KZ622849.1                                 22388 16 +    110857 aagaga----------a----a-aaa--gac--ca
i Pan_troglodytes.KZ622849.1                             I 21 C 0
s Papio_anubis.CM001495.2                                183443323 13 + 183742232 ta---a----------t----a-aaa--gac--aa
i Papio_anubis.CM001495.2                                I 140 T 153
s Papio_cynocephalus.k141_4307930                             6969 13 +     20448 ta---a----------t----a-aaa--gac--aa
i Papio_cynocephalus.k141_4307930                        I 88 T 101
s Papio_hamadryas.Contig39                                20563781 13 +  20919399 ta---a----------t----a-aaa--gac--aa
i Papio_hamadryas.Contig39                               I 92 T 105
s Papio_kindae.k141_1936966                                   5713 13 +     41871 ta---a----------t----a-aaa--gac--aa
i Papio_kindae.k141_1936966                              I 88 T 101
s Papio_papio.k141_802527                                     9006 13 +     27711 ta---a----------t----a-aaa--gac--aa
i Papio_papio.k141_802527                                I 96 T 109
s Papio_ursinus.k141_3428135                                  9075 13 +      9205 ta---a----------t----a-aaa--gac--aa
i Papio_ursinus.k141_3428135                             I 84 T 97
s Piliocolobus_badius.k141_1234363                           43724 13 +     62158 ga---a----------t----a-aaa--gac--aa
i Piliocolobus_badius.k141_1234363                       I 80 T 93
s Piliocolobus_gordonorum.k141_381342                        38471 13 +     89929 ga---a----------t----a-aaa--gac--aa
i Piliocolobus_gordonorum.k141_381342                    I 96 T 109
s Piliocolobus_kirkii.k141_448987                            39887 13 +     51399 ga---a----------t----a-aaa--gac--aa
i Piliocolobus_kirkii.k141_448987                        I 96 T 109
s Piliocolobus_tephrosceles.PDMG02000141.1                14296125 13 -  14605196 ga---a----------t----a-aaa--gac--aa
i Piliocolobus_tephrosceles.PDMG02000141.1               I 96 T 109
s Pongo_abelii.CM009266.2                                189131228 13 + 189387572 ga---a----------a----a-aaa--gac--aa
i Pongo_abelii.CM009266.2                                I 99 T 112
s Pongo_pygmaeus.ctg66                                     9570834 13 +   9816681 ga---a----------a----a-aaa--gac--aa
i Pongo_pygmaeus.ctg66                                   I 97 T 110
s Presbytis_comata.k141_677006                               73405 13 -     81375 ta---a----------t----a-aaa--gac--aa
i Presbytis_comata.k141_677006                           I 92 T 105
s Presbytis_mitrata.k141_1087752                              5225 13 +     19060 ta---a----------t----a-aaa--gac--aa
i Presbytis_mitrata.k141_1087752                         I 92 T 105
s Pygathrix_cinerea.k141_1153803                             15238 13 -     91421 ta---a----------t----a-aaa--gac--aa
i Pygathrix_cinerea.k141_1153803                         I 96 T 109
s Pygathrix_nigripes_b.ctg100                                 7609358 13 +   7812017 ta---a----------t----a-aaa--gac--aa
i Pygathrix_nigripes_b.ctg100                               I 96 T 109
s Pygathrix_nigripes_a.k141_215492                             15210 13 -     72585 ta---a----------t----a-aaa--gac--aa
i Pygathrix_nigripes_a.k141_215492                         I 96 T 109
s Rhinopithecus_bieti.k119_217274                             6923 13 -     11128 ta---a----------t----a-aaa--gac--aa
i Rhinopithecus_bieti.k119_217274                        I 95 T 108
s Rhinopithecus_roxellana.NC_044550.1                     91236270 13 - 195417433 ta---a----------t----a-aaa--gac--aa
i Rhinopithecus_roxellana.NC_044550.1                    I 89 T 102
s Rhinopithecus_strykeri.ctg102                            7671928 13 +   7961872 ta---a----------t----a-aaa--gac--aa
i Rhinopithecus_strykeri.ctg102                          I 95 T 108
s Saguinus_bicolor.k141_2619299                               8263 13 -      8359 ga---a----------a----g-gga--gga--aa
i Saguinus_bicolor.k141_2619299                          I 114 T 126
s Saguinus_imperator.k141_57697                                 13  5 +      1030 -----------------------gga--ag-----
i Saguinus_imperator.k141_57697                          T 252 I 147
s Saguinus_inustus.k141_3945547                                 82  5 -      8737 -----------------------gga--ag-----
i Saguinus_inustus.k141_3945547                          T 262 I 162
s Saguinus_labiatus.k141_285685                               8509  1 +      8564 a----------------------------------
i Saguinus_labiatus.k141_285685                          I 114 T 115
s Saguinus_midas.LG03                                    209469351 13 + 209938924 ga---a----------a----g-gga--gga--aa
i Saguinus_midas.LG03                                    I 106 T 119
s Saguinus_mystax.k141_374627                                 8065 13 -      9399 ga---a----------a----g-gga--gga--aa
i Saguinus_mystax.k141_374627                            I 114 T 127
s Saimiri_boliviensis.NW_024100920.1                     119950916 15 - 121099817 ga---g----------g-aa-g-gaa--gga--aa
i Saimiri_boliviensis.NW_024100920.1                     I 53 T 68
s Saimiri_oerstedii.k141_1487881                             40095 15 -     64574 ga---g----------g-aa-g-gaa--gga--aa
i Saimiri_oerstedii.k141_1487881                         I 53 T 68
s Saimiri_sciureus.k141_2278166                               3101 15 -     23631 ga---g----------g-aa-g-gaa--gga--aa
i Saimiri_sciureus.k141_2278166                          I 53 T 68
s Saimiri_ustus.k141_1484609                                 23363 14 -     61129 ga---g----------g-aa-g-gaa--gga--a-
i Saimiri_ustus.k141_1484609                             I 53 T 67
s Sapajus_apella.ctg103                                    5420801 15 -   5703754 aa---a----------g-aa-g-gaa--gga--aa
i Sapajus_apella.ctg103                                  I 168 T 183
s Sapajus_macrocephalus.k141_351809                          55844 15 -     80660 aa---g----------g-aa-g-gaa--gga--aa
i Sapajus_macrocephalus.k141_351809                      I 170 T 185
s Semnopithecus_entellus.k141_1672505                          108 13 -     12572 TA---A----------T----A-AAA--GAC--GA
i Semnopithecus_entellus.k141_1672505                    T 103 I 14
s Semnopithecus_hypoleucos.k141_1615806                      26952 13 +     39453 ta---a----------t----a-aaa--gac--aa
i Semnopithecus_hypoleucos.k141_1615806                  I 96 T 109
s Semnopithecus_johnii.k141_670120                            7471 13 +     27826 ta---a----------t----a-aaa--gac--aa
i Semnopithecus_johnii.k141_670120                       I 96 T 109
s Semnopithecus_priam.k141_638794                             6992 13 -     19483 ta---a----------t----a-aaa--gac--aa
i Semnopithecus_priam.k141_638794                        I 96 T 109
s Semnopithecus_schistaceus.k141_1572284                       299 13 -     12762 TA---A----------T----A-AAA--GAC--GA
i Semnopithecus_schistaceus.k141_1572284                 T 103 I 14
s Semnopithecus_vetulus.k141_910252                            155 13 +     13763 TA---A----------T----A-AAA--GAC--AA
i Semnopithecus_vetulus.k141_910252                      T 108 I 19
s Tarsius_lariang.k141_2201908                               26502 11 +     70052 ga---g----------g----g-agg--ga----g
i Tarsius_lariang.k141_2201908                           I 93 T 104
s Tarsius_wallacei.k141_254427                                1299 11 -     16117 ga---g----------g----g-agg--ga----g
i Tarsius_wallacei.k141_254427                           I 57 T 68
s Theropithecus_gelada.CM009954.1                        186428641 13 + 186847797 ta---a----------t----a-aaa--gac--aa
i Theropithecus_gelada.CM009954.1                        I 88 T 101
s Trachypithecus_auratus.k141_722599                         11043 13 -     20410 ta---a----------t----a-aaa--gac--aa
i Trachypithecus_auratus.k141_722599                     I 96 T 109
s Trachypithecus_crepusculus.k141_582567                       157 13 -     12674 ta---a----------t----a-aaa--gac--aa
i Trachypithecus_crepusculus.k141_582567                 I 96 T 109
s Trachypithecus_cristatus.k141_580354                       11144 13 +     19930 ta---a----------t----a-aaa--gac--aa
i Trachypithecus_cristatus.k141_580354                   I 96 T 109
s Trachypithecus_francoisi.k141_1412647                       7555 13 -     19997 ta---a----------t----a-aaa--gac--aa
i Trachypithecus_francoisi.k141_1412647                  I 80 T 93
s Trachypithecus_geei.k141_277701                            47694 13 -     60166 ta---a----------t----a-aaa--gac--aa
i Trachypithecus_geei.k141_277701                        I 95 T 108
s Trachypithecus_germaini.k141_912491                        15166 13 -     27529 ta---a----------t----a-aaa--gac--aa
i Trachypithecus_germaini.k141_912491                    I 96 T 109
s Trachypithecus_hatinhensis.k141_143409                     15110 13 -     18194 ta---a----------t----a-aaa--gac--aa
i Trachypithecus_hatinhensis.k141_143409                 I 96 T 109
s Trachypithecus_laotum.k141_907409                           8822 13 -     21137 ta---a----------t----a-aaa--gac--aa
i Trachypithecus_laotum.k141_907409                      I 80 T 93
s Trachypithecus_leucocephalus.k141_587342                    7525 13 -     10723 ta---a----------t----a-aaa--gac--aa
i Trachypithecus_leucocephalus.k141_587342               I 80 T 93
s Trachypithecus_melamera.k141_434728                         6697 13 +      9834 ta---a----------t----a-aaa--gac--aa
i Trachypithecus_melamera.k141_434728                    I 96 T 109
s Trachypithecus_obscurus.k141_190785                        25010 13 +     32220 ta---a----------t----a-aaa--gac--aa
i Trachypithecus_obscurus.k141_190785                    I 96 T 109
s Trachypithecus_phayrei.ctg124                            5939112 13 +   6242583 ta---a----------t----a-aaa--gac--aa
i Trachypithecus_phayrei.ctg124                          I 96 T 109
s Trachypithecus_pileatus.k141_2007326                        8363 13 +     20839 ta---a----------t----a-aaa--gac--aa
i Trachypithecus_pileatus.k141_2007326                   I 95 T 108
e Echinops_telfairi.JH980293.1                            48780377  0 + 111700974 C
e Otolemur_garnettii.GL873799.1                             696350  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         4187  0 +      8798 C
e Galago_senegalensis.k141_631886                             4346  0 +     11339 C
e Galago_moholi.ctg2040                                     426655  0 -    453645 C
e Saimiri_macrodon.k141_716185                               23414  0 +     45824 C
e Saimiri_cassiquiarensis.k141_2188234                       23319  0 +     46362 C
e Callithrix_kuhlii.k119_1164682                             11921  0 -     12001 C
e Alouatta_seniculus.k141_117119                             14830  0 +     50774 C
e Mus_pahari.LT608297.1                                   31355125 13 -  89631738 T
e Mus_spretus.CM004101.1                                  90752527 13 - 130317789 T
e Mus_musculus.chr8                                       87650466 13 - 129401213 T
e Mus_caroli.LT608237.1                                   84361468 13 - 120012414 T
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Loris_tardigradus.ctg83                                  1004723  0 +   6120653 C
e Loris_lydekkerianus.k141_2539221                            5903  0 +     11245 C
e Perodicticus_potto.k141_1092580                             8563  0 +     25941 C
e Perodicticus_ibeanus.k141_855320                           10157  0 +     13100 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      14991  0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5344  0 +     86975 C
e Xerus_inauris.XerIna_scaffold_2302                          1115  0 +    224448 C
e Vulpes_lagopus.VulLag_flattened_line_30954                 10771  0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5371858  0 -   5488506 C
e Varecia_variegata.k141_1128296                             11506  0 +     24756 C
e Varecia_rubra.k141_590885                                  11447  0 +     50397 C
e Ursus_maritimus.KK499267.1                               4850420  0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   53301  0 -     77625 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     9305  0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2155654  0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4293232  0 +  10818551 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     81170  0 +    610378 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   6383  0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              105493  0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    387189  0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      118732  0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 72600  0 +    116680 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                10779  0 +     41958 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6810477  0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629              18302  0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             30715  0 +     97271 C
e Spermophilus_dauricus.KZ294078.1                         1953975  0 -   3870691 C
e Sorex_araneus.JH798187.1                                13651001  0 -  18376816 C
e Solenodon_paradoxus.SolPar_flattened_line_126               3755  0 +   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_60841                    11982 13 -     12148 T
e Scalopus_aquaticus.ScaAqu_scaffold_662                    153195  0 -    313613 C
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                87787  0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570728 13 +  90668790 T
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20274305  0 -  38429054 C
e Pteropus_vampyrus.KN534172.1                                6819  0 -      8028 C
e Pteropus_alecto.KB030862.1                              22976766  0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         40214  0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            15049  0 -     21811 C
e Psammomys_obesus.NESX01036370.1                            10498 13 -     21651 T
e Propithecus_verreauxi.k141_956661                           4836  0 -      6182 C
e Propithecus_tattersalli.k141_790011                        28613  0 -     67325 C
e Propithecus_perrieri.k141_1200571                           4788  0 -     24134 C
e Propithecus_edwardsi.k141_1176054                          26601  0 +     35766 C
e Propithecus_diadema.k141_58108                              1123  0 -     13098 C
e Propithecus_coronatus.k141_347390                          29080  0 +     38485 C
e Propithecus_coquerelli.NW_012148875.1                     990768  0 +   2598838 C
e Prolemur_simus.MPIZ01000396.1                            2596787  0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                 13333  0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             1738  0 +     22620 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     28179  0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18194880 13 -  18517816 T
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12633  0 -     78924 C
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Panthera_tigris.KE722367.1                               4721239  0 -   8748460 C
e Panthera_pardus.KV860321.1                                264360  0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  151151  0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       462326  0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                        67147358  0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               9824  0 -     18566 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80254 13 +    102263 T
e Ondatra_zibethicus.OndZib_scaffold_46174                   25254 13 +     28053 T
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              506631  0 -   2017862 C
e Octodon_degus.JH651603.1                                  746902  0 +  11899542 C
e Ochotona_princeps.JH802162.1                             1363500  0 +   3988456 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761622  0 + 199412804 C
e Nycticebus_coucang.k141_1127096                              192  0 +      2075 C
e Nycticebus_bengalensis.LG01                            102586268  0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9149358  0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20306946  0 +  31847680 C
e Nannospalax_galili.KL204047.1                            2034163  0 -   3037898 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189239  0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_482318                         462  0 -       721 C
e Myotis_lucifugus.GL429869.1                              3903788  0 -   4330536 C
e Myotis_davidii.KB100139.1                                1587702  0 -   6019432 C
e Myotis_brandtii.KE162005.1                                280434  0 -  10118263 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     71292  0 -     80779 C
e Mustela_putorius.JH418006.1                               301215  0 -  14710649 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              5066 31 +     14296 T
e Murina_feae.MurFea_scaffold_85699                           6791  0 +     14753 C
e Mungos_mungo.MunMun_flattened_line_23663                   35401  0 +     37127 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 141596  0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Mirza_zaza.k141_952172                                      9072  0 -     37649 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         5692  0 -      8324 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             34429 143 +     64694 T
e Miniopterus_natalensis.LDJU01000034.1                    1850748 143 +   8254450 T
e Microtus_ochrogaster.CM001695.1                         11260586 13 -  27267610 T
e Micronycteris_hirsuta.MicHir_scaffold_52381                15631  0 -     19307 C
e Microgale_talazaci.MicTal_scaffold_6613                    22124  0 -    145209 C
e Microcebus_murinus.CM007674.1                           18291527  0 -  93316391 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182348 13 -  29670104 T
e Meriones_unguiculatus.MerUng_scaffold_7390                 32854 13 +    140813 T
e Mellivora_capensis.MelCap_flattened_line_69365             10024  0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                        10315  0 -    207569 C
e Marmota_marmota.CZRN01000018.1                          33103120  0 -  40650429 C
e Manis_pentadactyla.KN006162.1                              50473  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18484  0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 90598  0 +     94391 C
e Lycaon_pictus.CM007581.1                                17955096  0 -  59628241 C
e Loxodonta_africana.GL010049.1                            4217306  0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     6477  0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3042824  0 +   3914936 C
e Lepilemur_septentrionalis.k141_185316                      26998  0 +     54090 C
e Lepilemur_ruficaudatus.k141_121139                          1602  0 +     25010 C
e Lepilemur_dorsalis.k141_577674                             29062  0 +     45836 C
e Lepilemur_ankaranensis.k141_596936                         11001  0 -     23766 C
e Lemur_catta.scaffold_24                                 15524107  0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    14110  0 -     42476 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276895  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Indri_indri.k141_3655594                                   22545  0 +     31101 C
e Ictidomys_tridecemlineatus.JH393364.1                    7520924  0 -   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                      83161  0 +    135385 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  44996  0 +     55795 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                 878  0 +      7595 C
e Heterocephalus_glaber.JH602082.1                        20662270  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               242302  0 +    327341 C
e Hapalemur_occidentalis.k141_907772                         13592  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                         13755  0 -     41752 C
e Hapalemur_griseus.k141_1511508                             13654  0 +     18253 C
e Hapalemur_gilberti.k141_488810                             12015  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           6866  0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32727 40 +     78134 T
e Glis_glis.GliGli_scaffold_19807                            31485 39 +     49224 T
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Galeopterus_variegatus.GalVar_scaffold_108840               1205  0 -      9135 C
e Galagoides_demidoff.k141_1711393                            1659  0 +     41679 C
e Fukomys_damarensis.KN121974.1                             850482  0 +   3816255 C
e Felis_nigripes.FelNig_flattened_line_20823                  9536  0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20195792  0 + 205367284 C
e Eulemur_sanfordi.k141_1122526                              13802  0 +    111500 C
e Eulemur_rufus.k141_1476633                                  4229  0 -     17153 C
e Eulemur_rubriventer.k141_774594                              176  0 +     13026 C
e Eulemur_mongoz.k141_232305                                 10685  0 +     97555 C
e Eulemur_macaco.k141_1562045                                12755  0 +     75513 C
e Eulemur_fulvus.k141_544389                                 13993  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                            12758  0 +     26330 C
e Eulemur_coronatus.k141_885031                              15554  0 -     25546 C
e Eulemur_collaris.k141_377015                                6530  0 -     16928 C
e Eulemur_albifrons.k141_342033                              13827  0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3328221  0 -   7059049 C
e Equus_przewalskii.KK951119.1                               33372  2 +    498745 I
e Equus_caballus.CM000403.2                               18531344  2 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1283523  2 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2145694  0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16329287  0 -  41312741 C
e Ellobius_talpinus.LOJH01081419.1                             538 13 +      8657 T
e Ellobius_lutescens.LOEQ01008920.1                          20407 13 -    110024 T
e Elephantulus_edwardii.JH947257.1                         1097698  2 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Eidolon_helvum.KE759718.1                                  10507  0 +     11740 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    36448  0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    6016  0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  673264  0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8630104  0 +  20541912 C
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Daubentonia_madagascariensis.ctg71                      12537322  0 -  12879189 C
e Dasypus_novemcinctus.JH564415.1                            63517  0 +   2246927 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35813  0 +     51376 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    837136  0 +   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129             28469  0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_37019               2943  0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11667673 13 + 224834208 T
e Cricetomys_gambianus.CriGam_scaffold_18520                 50291  0 +     63868 C
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          14380  0 -     20389 C
e Condylura_cristata.JH655891.1                           17548078  0 -  53390261 C
e Colobus_guereza.LG01                                   199948999 41 + 200372422 T
e Choloepus_hoffmanni.KN194906.1                            173364  0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 18288  0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1252855  0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           16468  0 +     57038 C
e Cheirogaleus_major.k141_333249                             21103  0 -     52598 C
e Chaetophractus_vellerosus.ChaVel_scaffold_138870             510  0 -      8501 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2440  0 -     25243 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     92985  0 +    217609 C
e Castor_canadensis.CasCan_scaffold_2074                    137204 66 +    179628 T
e Carollia_perspicillata.CarPer_scaffold_92756                5091  0 -     11696 C
e Capromys_pilorides.CapPil_scaffold_65020                    1106  0 -     12242 C
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18500368  0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17958856  0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9034591  0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    185205  0 -    185531 C
e CanFam4.chr16                                           17799148  0 -  60362399 C
e Camelus_ferus.KB017975.1                                  403096  0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2334813  0 -   7040546 C
e Camelus_bactrianus.KN276810.1                           10002355  0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              54351  0 +     85213 C
e Avahi_laniger.k141_765380                                  53724  0 -     92717 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  4733  0 +     43469 C
e Arctocebus_calabarensis.k141_2318572                       11521  0 +     14667 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      12658  0 +     20879 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      185324  0 +    412891 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74594  0 -     89534 C
e Ailurus_fulgens.LNAC01001112.1                             79329  0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9510559  0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     70906 13 +     87051 T
e Acinonyx_jubatus.LLWD01001279.1                           827298  0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6858 15 +     62944 aaa-ga---a----------------------------aag---aaa---g--ga
s Acinonyx_jubatus.LLWD01001279.1                           827298 14 -   1699592 -TA-GA---A----------------------------TGG---AAT---G--CA
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 9
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510559 14 -  29979442 -TA-CA---G----------------------------TGG---AAT---G--CA
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 9
s Ailurus_fulgens.LNAC01001112.1                             79329 14 -    347723 -TA-GA---G----------------------------TGG---AAT---G--GA
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 9
s Allactaga_bullata.AllBul_scaffold_9566                     74594  3 -     89534 -CA-G--------------------------------------------------
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14668 12 -     52922 ----ga---g----------------------------tag---aat---g--ta
i Allenopithecus_nigroviridis.k141_3361533               T 123 I 4
s Allochrocebus_lhoesti.k141_4309873                         14604 12 -     28001 ----ga---g----------------------------tag---aat---g--ta
i Allochrocebus_lhoesti.k141_4309873                     T 103 I 4
s Allochrocebus_preussi.k141_1442296                          5100 12 -     18505 ----ga---g----------------------------tag---aat---g--ta
i Allochrocebus_preussi.k141_1442296                     T 103 I 4
s Allochrocebus_solatus.k141_166128                           5954 12 -     12518 ----ga---g----------------------------tag---aat---g--ta
i Allochrocebus_solatus.k141_166128                      T 103 I 4
s Alouatta_belzebul.k141_3560514                              7420 12 +     51355 ----GA---G----------------------------TAG---AAA---G--TA
i Alouatta_belzebul.k141_3560514                         T 128 I 4
s Alouatta_caraya.k141_1701091                                 543 11 -     36483 -----a---g----------------------------tag---aaa---g--ta
i Alouatta_caraya.k141_1701091                           T 123 I 4
s Alouatta_discolor.k141_743489                               3606 12 -     45847 ----GA---G----------------------------TAG---AAA---G--TA
i Alouatta_discolor.k141_743489                          C 0 I 4
s Alouatta_juara.k141_1509701                                24811 12 +     25266 ----GA---G----------------------------TAG---AAA---G--TA
i Alouatta_juara.k141_1509701                            T 125 I 4
s Alouatta_macconnelli.k141_918386                             536 12 -      9457 ----ga---g----------------------------tag---aaa---g--ta
i Alouatta_macconnelli.k141_918386                       T 115 I 4
s Alouatta_nigerrima.k141_3472759                            18114 12 -     18578 ----ga---g----------------------------tag---aaa---g--ta
i Alouatta_nigerrima.k141_3472759                        T 123 I 4
s Alouatta_palliata.k141_2135620                              3513 12 +     47717 ----GA---G----------------------------TAG---AAA---G--TA
i Alouatta_palliata.k141_2135620                         T 110 I 4
s Alouatta_puruensis.k141_362188                               210 12 +      5663 ----GA---G----------------------------TAG---AAA---G--TA
i Alouatta_puruensis.k141_362188                         T 125 I 4
s Alouatta_seniculus.k141_117119                             14830 12 +     50774 ----GA---G----------------------------TAG---AAA---G--TA
i Alouatta_seniculus.k141_117119                         C 0 I 4
s Anoura_caudifer.AnoCau_scaffold_1412                      185324 14 +    412891 -CA-GA---G----------------------------AAT---AAT---A--TA
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 9
s Aotus_azarae.k141_3104676                                  15455 12 -     33861 ----ga---g----------------------------tag---aat---g--ta
i Aotus_azarae.k141_3104676                              T 88 I 4
s Aotus_griseimembra.k141_2240599                            15475 12 -     34016 ----ga---g----------------------------tag---aat---g--ta
i Aotus_griseimembra.k141_2240599                        T 100 I 4
s Aotus_nancymaae.KZ198451.1                               4297872 12 -   5030052 ----GA---G----------------------------TAG---AAT---G--TA
i Aotus_nancymaae.KZ198451.1                             T 96 I 4
s Aotus_trivirgatus.k141_2152450                             15477 12 -     34685 ----ga---g----------------------------tag---aat---g--ta
i Aotus_trivirgatus.k141_2152450                         T 100 I 4
s Aotus_vociferans.k141_344750                               28601 12 -     47192 ----ga---g----------------------------tag---aat---g--ta
i Aotus_vociferans.k141_344750                           T 100 I 4
s Aplodontia_rufa.AprRuf_scaffold_68852                      12658 13 +     20879 -CA-GA---G----------------------------TA----AAT---G--TA
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 28
s Arctocebus_calabarensis.k141_2318572                       11521 14 +     14667 -AA-GA---G----------------------------CAG---AAT---G--TA
i Arctocebus_calabarensis.k141_2318572                   C 0 I 4
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4733 14 +     43469 -TA-GA---A----------------------------AAT---AAT---G--TA
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 9
s Avahi_laniger.k141_765380                                  53724 14 -     92717 -AA-GA---G----------------------------TAG---AAT---A--TA
i Avahi_laniger.k141_765380                              C 0 I 4
s Avahi_peyrierasi.k141_1424874                              54351 14 +     85213 -AA-GA---G----------------------------TAG---AAT---A--TA
i Avahi_peyrierasi.k141_1424874                          C 0 I 4
s Callibella_humilis.k141_1278103                             5210 12 -     10423 ----ga---g----------------------------tag---aat---g--ta
i Callibella_humilis.k141_1278103                        T 107 I 4
s Callimico_goeldii.k141_1091182                             24682 12 +     31915 ----GA---G----------------------------TAG---AAT---G--TA
i Callimico_goeldii.k141_1091182                         T 112 I 3
s Callithrix_geoffroyi.k119_512088                            5176 12 +      5267 ----GA---G----------------------------TAG---AAT---G--TA
i Callithrix_geoffroyi.k119_512088                       T 91 I 4
s Callithrix_jacchus.pat_scaffold_3                       23590390 12 - 189096842 ----ga---g----------------------------tag---aat---g--ta
i Callithrix_jacchus.pat_scaffold_3                      T 103 I 4
s Callithrix_kuhlii.k119_1164682                             11921 12 -     12001 ----GA---G----------------------------TAG---AAT---G--TA
i Callithrix_kuhlii.k119_1164682                         C 0 I 4
s Camelus_bactrianus.KN276810.1                           10002355 14 -  17673402 -CA-GA---G----------------------------TAG---AAT---A--TA
i Camelus_bactrianus.KN276810.1                          C 0 I 9
s Camelus_dromedarius.KN272107.1                           2334813 14 -   7040546 -CA-GA---G----------------------------TAG---AAT---A--TA
i Camelus_dromedarius.KN272107.1                         C 0 I 9
s Camelus_ferus.KB017975.1                                  403096 14 -   1652518 -CA-GA---G----------------------------TAG---AAT---A--TA
i Camelus_ferus.KB017975.1                               C 0 I 9
s CanFam4.chr16                                           17799148 14 -  60362399 -TA-GA---G----------------------------TGG---AAT---G--CA
i CanFam4.chr16                                          C 0 I 9
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    185205 14 -    185531 -TA-GA---G----------------------------TGG---AAT---G--CA
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 I 9
s Canis_lupus_dingo.QKWQ01000480.1                         9034591 14 -   9314153 -TA-GA---G----------------------------TGG---AAT---G--CA
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 9
s Canis_lupus_familiaris.chr16                            17958856 14 -  59632846 -TA-GA---G----------------------------TGG---AAT---G--CA
i Canis_lupus_familiaris.chr16                           C 0 I 9
s Canis_lupus_orion.HG994398.1                            18500368 14 +  63665305 -TA-GA---G----------------------------TGG---AAT---G--CA
i Canis_lupus_orion.HG994398.1                           C 0 I 9
s Capromys_pilorides.CapPil_scaffold_65020                    1106 14 -     12242 -CA-GA---G----------------------------TAC---AAT---G--TA
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 17
s Carlito_syrichta.NW_007247396.1                           201402 12 +    308752 ----Ga---g----------------------------tag---aaa---g--ga
i Carlito_syrichta.NW_007247396.1                        T 89 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5091 14 -     11696 -CA-GA---A----------------------------AAT---AAC---G--TA
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 9
s Castor_canadensis.CasCan_scaffold_2074                    137138  6 +    179628 --------------------------------------------AAT---G--TA
i Castor_canadensis.CasCan_scaffold_2074                 T 66 I 10
s Catagonus_wagneri.CatWag_scaffold_2839                     92985 14 +    217609 -CA-GA---G----------------------------TAG---AAT---A--TA
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 9
s Cebuella_niveiventris.k141_1251222                          9835 12 -     11392 ----ga---g----------------------------tag---aat---g--ta
i Cebuella_niveiventris.k141_1251222                     T 103 I 4
s Cebuella_pygmaea.k141_1309012                               5933 12 -      7577 ----ga---g----------------------------tag---aat---g--ta
i Cebuella_pygmaea.k141_1309012                          T 103 I 4
s Cebus_albifrons.Contig27                                25651962 12 +  26074798 ----ga---g----------------------------tag---aat---g--ta
i Cebus_albifrons.Contig27                               T 674 I 4
s Cebus_olivaceus.k141_398305                                 1538 12 +      1777 ----GA---G----------------------------TAG---AAT---G--TA
i Cebus_olivaceus.k141_398305                            C 0 I 4
s Cebus_unicolor.k141_544048                                 49875 12 -     74725 ----ga---g----------------------------tag---aat---g--ta
i Cebus_unicolor.k141_544048                             C 0 I 4
s Cephalopachus_bancanus.k141_1423433                         5407 12 +     31688 ----ga---g----------------------------tag---aat---g--ga
i Cephalopachus_bancanus.k141_1423433                    T 111 C 0
s Ceratotherium_simum.JH767749.1                          12231413 14 +  27778364 -CA-GA---G----------------------------TAG---AAC---A--TA
i Ceratotherium_simum.JH767749.1                         C 0 I 9
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2440 14 -     25243 -CA-GA---G----------------------------TAG---AAC---A--TA
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 I 9
s Cercocebus_atys.KQ010504.1                               4475613 12 +   4669795 ----GA---G----------------------------TAG---ACT---G--Ta
i Cercocebus_atys.KQ010504.1                             T 101 I 4
s Cercocebus_chrysogaster.k141_393940                        14158 12 -     19203 ----ga---g----------------------------tag---act---g--ta
i Cercocebus_chrysogaster.k141_393940                    T 98 I 4
s Cercocebus_lunulatus.k141_3342297                            774 12 -     14043 ----ga---g----------------------------tag---act---g--ta
i Cercocebus_lunulatus.k141_3342297                      T 101 I 4
s Cercocebus_torquatus.k141_3057011                           8810 12 +     27781 ----GA---G----------------------------TAG---ACT---G--TA
i Cercocebus_torquatus.k141_3057011                      T 101 I 4
s Cercopithecus_ascanius.k141_1024104                         8975 12 -     20310 ----ga---g----------------------------tag---aat---g--ta
i Cercopithecus_ascanius.k141_1024104                    T 103 I 4
s Cercopithecus_cephus.k141_1078548                          11954 12 +     29689 ----GA---G----------------------------TAG---AAT---G--TA
i Cercopithecus_cephus.k141_1078548                      T 104 I 4
s Cercopithecus_diana.k141_1150327                            6708 12 -     20078 ----ga---g----------------------------tag---aat---g--ta
i Cercopithecus_diana.k141_1150327                       T 103 I 4
s Cercopithecus_hamlyni.k141_187466                          14631 12 -     27936 ----ga---g----------------------------tag---aat---g--ta
i Cercopithecus_hamlyni.k141_187466                      T 103 I 4
s Cercopithecus_lowei.k141_1854285                            3495 12 -     17152 ----ga---g----------------------------tag---aat---g--ta
i Cercopithecus_lowei.k141_1854285                       T 103 I 4
s Cercopithecus_albogularis.ctg5                                38817034 12 +  39242232 ----GA---G----------------------------TAG---AAT---G--TA
i Cercopithecus_albogularis.ctg5                               T 103 I 4
s Cercopithecus_mona.ctg39                                21222726 12 -  21565898 ----ga---g----------------------------tag---aat---g--ta
i Cercopithecus_mona.ctg39                               T 103 I 4
s Cercopithecus_neglectus.k141_2526306                       39844 12 -     53127 ----ga---g----------------------------tag---aat---g--ta
i Cercopithecus_neglectus.k141_2526306                   T 103 I 4
s Cercopithecus_nictitans.k141_1119848                          95 12 +     27489 ----GA---G----------------------------TAG---AAT---G--TA
i Cercopithecus_nictitans.k141_1119848                   C 0 I 4
s Cercopithecus_petaurista.k141_807961                       14644 12 -     27947 ----ga---g----------------------------tag---aat---g--ta
i Cercopithecus_petaurista.k141_807961                   T 103 I 4
s Cercopithecus_pogonias.k141_822820                         14620 12 +     17596 ----GA---G----------------------------TAG---AAT---G--TA
i Cercopithecus_pogonias.k141_822820                     T 103 I 4
s Cercopithecus_roloway.k141_2581234                           667 12 +     14005 ----GA---G----------------------------TAG---ACT---G--TA
i Cercopithecus_roloway.k141_2581234                     T 103 I 4
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             510 14 -      8501 -CA-GA---G----------------------------TAG---AAA---G--TA
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 I 9
s Cheirogaleus_major.k141_333249                             21103 14 -     52598 -AA-GA---G----------------------------TAG---AAT---A--TA
i Cheirogaleus_major.k141_333249                         C 0 I 6
s Cheirogaleus_medius.k141_1055463                           16468 14 +     57038 -AA-GA---G----------------------------TAG---AAT---A--TA
i Cheirogaleus_medius.k141_1055463                       C 0 I 6
s Chinchilla_lanigera.JH722012.1                           1252855 14 +   2543920 -CA-GA---G----------------------------TAC---AAT---G--TA
i Chinchilla_lanigera.JH722012.1                         C 0 I 16
s Chiropotes_albinasus.k141_2813271                          11087 12 +     11226 ----GA---C----------------------------TAG---AAT---G--TA
i Chiropotes_albinasus.k141_2813271                      C 0 I 4
s Chlorocebus_aethiops.ctg25                              18428604 12 -  18827391 ----ga---g----------------------------tag---aat---g--ta
i Chlorocebus_aethiops.ctg25                             T 103 I 4
s Chlorocebus_pygerythrus.k141_1025673                       15041 12 -     50209 ----ga---g----------------------------tag---aat---g--ta
i Chlorocebus_pygerythrus.k141_1025673                   T 103 I 4
s Chlorocebus_sabaeus.CM001947.1                         135422041 12 + 135778131 ----GA---G----------------------------TAG---AAT---G--TA
i Chlorocebus_sabaeus.CM001947.1                         T 103 I 4
s Choloepus_didactylus.ChoDid_scaffold_45914                 18288 14 +     19366 -CA-GA---G----------------------------TAG---AAT---G--CT
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 I 9
s Choloepus_hoffmanni.KN194906.1                            173364 14 +    839153 -CA-GA---G----------------------------TAG---AAT---G--CA
i Choloepus_hoffmanni.KN194906.1                         C 0 I 9
s Colobus_angolensis.KN981557.1                            1910546 12 +   2368649 ----GA---G----------------------------TAG---AAT---G--Ta
i Colobus_angolensis.KN981557.1                          T 109 I 4
s Colobus_polykomos.k141_906115                              37084 12 +     84244 ----GA---G----------------------------TAG---AAT---G--TA
i Colobus_polykomos.k141_906115                          T 105 I 4
s Condylura_cristata.JH655891.1                           17548078 16 -  53390261 -CA-GT---G----------------------------TAG---AAT---GAGTA
i Condylura_cristata.JH655891.1                          C 0 I 9
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14380  8 -     20389 -CA-GA---G----------------------------TAG--------------
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 15
s Cricetomys_gambianus.CriGam_scaffold_18520                 50291  2 +     63868 -ca----------------------------------------------------
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               2943 42 -     19598 -CA-GG---ATGTAATATATGTTGGAGTAATTGGTTCTCAC---AAT---A--TA
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 I 9
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28469 14 -     87169 -TA-GA---G----------------------------TGG---AAT---G--CA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 9
s Ctenodactylus_gundi.CteGun_scaffold_65                    837136 14 +   1526836 -CA-GA---G----------------------------TAA---AAT---G--GC
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 9
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35813 14 +     51376 -CA-GG---G----------------------------TAC---AAT---G--TA
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 17
s Dasypus_novemcinctus.JH564415.1                            63517 14 +   2246927 -CA-GA---G----------------------------TAG---AAA---T--TA
i Dasypus_novemcinctus.JH564415.1                        C 0 I 9
s Daubentonia_madagascariensis.ctg71                      12537322 14 -  12879189 -AA-GA---G----------------------------TAG---AAT---G--TA
i Daubentonia_madagascariensis.ctg71                     C 0 I 4
s Desmodus_rotundus.KZ672289.1                             8630104 14 +  20541912 -TA-GA---G----------------------------TAG---AAT---A--TA
i Desmodus_rotundus.KZ672289.1                           C 0 I 9
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673264 14 +   1390856 -CA-GA---G----------------------------TGG---AAC---G--TA
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 9
s Diceros_bicornis.DicBicMic_scaffold_5955                    6016 14 +    198055 -CA-GA---G----------------------------TAG---AAC---G--TA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 9
s Dinomys_branickii.DinBra_scaffold_21862                    36448 14 +     67921 -CA-GA---G----------------------------TAC---AAT---G--CA
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 17
s Echinops_telfairi.JH980293.1                            48780377 14 + 111700974 -TA-GA---G----------------------------TGA---AAT---G--TA
i Echinops_telfairi.JH980293.1                           C 0 I 9
s Eidolon_helvum.KE759718.1                                  10507  8 +     11740 -CA-AC---A----------------------------TAG--------------
i Eidolon_helvum.KE759718.1                              C 0 I 13
s Elephantulus_edwardii.JH947257.1                         1097700 11 +  10337057 -----G---G----------------------------AGG---AAT---G--TA
i Elephantulus_edwardii.JH947257.1                       I 2 I 4
s Enhydra_lutris.KZ291758.1                               16329287 14 -  41312741 -TA-AA---G----------------------------TGG---AAT---G--CA
i Enhydra_lutris.KZ291758.1                              C 0 I 9
s Eptesicus_fuscus.JH977646.1                              2145694 16 -  14770903 -CA-GA---G----------------------------CAG---CAT-ATA--GA
i Eptesicus_fuscus.JH977646.1                            C 0 I 9
s Equus_asinus.JREZ01000139.1                              1283525 11 +   4378816 -----A---G----------------------------TAA---AAG---A--GG
i Equus_asinus.JREZ01000139.1                            I 2 I 9
s Equus_caballus.CM000403.2                               18531346 11 -  39960074 -----A---G----------------------------TAA---AAG---A--GG
i Equus_caballus.CM000403.2                              I 2 I 9
s Equus_przewalskii.KK951119.1                               33374 11 +    498745 -----A---G----------------------------TAA---AAG---A--GG
i Equus_przewalskii.KK951119.1                           I 2 I 9
s Erinaceus_europaeus.JH835339.1                           3328221 13 -   7059049 -CA-TA---G----------------------------TAA---AGT---A--T-
i Erinaceus_europaeus.JH835339.1                         C 0 I 9
s Erythrocebus_patas.Contig38                             21205211 12 -  21539334 ----ga---g----------------------------tag---aat---g--ta
i Erythrocebus_patas.Contig38                            T 103 I 4
s Eulemur_albifrons.k141_342033                              13827 14 -     14127 -AA-GC---A----------------------------TAG---AAT---A--TA
i Eulemur_albifrons.k141_342033                          C 0 I 4
s Eulemur_collaris.k141_377015                                6530 14 -     16928 -AA-GC---A----------------------------TAG---AAT---A--TA
i Eulemur_collaris.k141_377015                           C 0 I 4
s Eulemur_coronatus.k141_885031                              15554 14 -     25546 -AA-GC---A----------------------------TAG---AAT---A--TA
i Eulemur_coronatus.k141_885031                          C 0 I 4
s Eulemur_flavifrons.k141_1184614                            12758 14 +     26330 -AA-GC---G----------------------------TAG---AAT---A--TA
i Eulemur_flavifrons.k141_1184614                        C 0 I 4
s Eulemur_fulvus.k141_544389                                 13993 14 +     23973 -AA-GC---A----------------------------TAG---AAT---A--TA
i Eulemur_fulvus.k141_544389                             C 0 I 4
s Eulemur_macaco.k141_1562045                                12755 14 +     75513 -AA-GC---G----------------------------TAG---AAT---A--TA
i Eulemur_macaco.k141_1562045                            C 0 I 4
s Eulemur_mongoz.k141_232305                                 10685 14 +     97555 -AA-GC---A----------------------------TAG---AAT---A--TA
i Eulemur_mongoz.k141_232305                             C 0 I 4
s Eulemur_rubriventer.k141_774594                              176 14 +     13026 -AA-GC---A----------------------------TAG---AAT---A--TA
i Eulemur_rubriventer.k141_774594                        C 0 I 4
s Eulemur_rufus.k141_1476633                                  4229 14 -     17153 -AA-GC---A----------------------------TAG---AAT---A--TA
i Eulemur_rufus.k141_1476633                             C 0 I 4
s Eulemur_sanfordi.k141_1122526                              13802 14 +    111500 -AA-GC---A----------------------------TAG---AAT---A--TA
i Eulemur_sanfordi.k141_1122526                          C 0 I 4
s Felis_catus.CM001381.2                                  20236949 14 + 206538554 -TA-GA---A----------------------------TGG---AAT---G--CA
i Felis_catus.CM001381.2                                 C 0 I 9
s Felis_catus_fca126.CM031415.1                           20195792 14 + 205367284 -TA-GA---A----------------------------TGG---AAT---G--CA
i Felis_catus_fca126.CM031415.1                          C 0 I 9
s Felis_nigripes.FelNig_flattened_line_20823                  9536 14 -     36744 -TA-GA---A----------------------------TGG---AAT---G--CA
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 9
s Fukomys_damarensis.KN121974.1                             850482 14 +   3816255 -CA-GA---G----------------------------TAT---AAT---A--Ta
i Fukomys_damarensis.KN121974.1                          C 0 I 17
s Galago_moholi.ctg2040                                     426655 14 -    453645 -AG-GA---G----------------------------TAA---AAT---G--TA
i Galago_moholi.ctg2040                                  C 0 I 4
s Galago_senegalensis.k141_631886                             4346 14 +     11339 -AG-GA---G----------------------------TAA---AAT---G--TA
i Galago_senegalensis.k141_631886                        C 0 I 4
s Galagoides_demidoff.k141_1711393                            1659 14 +     41679 -AA-GA---G----------------------------TAA---AAT---G--TA
i Galagoides_demidoff.k141_1711393                       C 0 I 4
s Galeopterus_variegatus.GalVar_scaffold_108840               1205 14 -      9135 -TA-GA---G----------------------------TAG---AAT---G--CA
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 I 4
s Gorilla_beringei.k141_3596273                              15994 12 -     32273 ----GA---G----------------------------TTG---AAT---G--TA
i Gorilla_beringei.k141_3596273                          T 119 I 4
s Gorilla_gorilla.LT578341.1                             186338140 12 + 186649187 ----GA---G----------------------------TTG---AAT---G--TA
i Gorilla_gorilla.LT578341.1                             C 0 I 4
s Hapalemur_alaotrensis.k141_170648                           6866 14 -     19426 -AA-GC---G----------------------------TAG---AAT---G--TA
i Hapalemur_alaotrensis.k141_170648                      C 0 I 4
s Hapalemur_gilberti.k141_488810                             12015 14 -     15286 -AA-GC---G----------------------------TAG---AAT---A--TA
i Hapalemur_gilberti.k141_488810                         C 0 I 4
s Hapalemur_griseus.k141_1511508                             13654 14 +     18253 -AA-GC---A----------------------------TAG---AAT---A--TA
i Hapalemur_griseus.k141_1511508                         C 0 I 4
s Hapalemur_meridionalis.k141_248335                         13755 14 -     41752 -AA-GC---G----------------------------TAG---AAT---A--TA
i Hapalemur_meridionalis.k141_248335                     C 0 I 4
s Hapalemur_occidentalis.k141_907772                         13592 14 -     16460 -AA-GC---G----------------------------TAG---AAT---A--TA
i Hapalemur_occidentalis.k141_907772                     C 0 I 4
s Helogale_parvula.HelPar_flattened_line_2585               242302 14 +    327341 -TA-GA---G----------------------------TGG---AAT---G--CA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 9
s Heterocephalus_glaber.JH602082.1                        20662270 14 +  22651954 -CA-GA---G----------------------------TAG---AAT---A--CA
i Heterocephalus_glaber.JH602082.1                       C 0 I 18
s Heterohyrax_brucei.HetBruBak_scaffold_122365                 878 14 +      7595 -CA-GA---G----------------------------CAG---AAT---G--TA
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 I 9
s Hoolock_leuconedys.ctg274                                    434806 12 +    630532 ----CA---G----------------------------TAG---AAT---G--ta
i Hoolock_leuconedys.ctg274                                 T 115 I 4
s Hyaena_hyaena.HyaHya_flattened_line_26932                  44996 14 +     55795 -TA-GA---G----------------------------TGG---AAT---G--CA
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 9
s Hystrix_cristata.HysCri_scaffold_5660                      83161 12 +    135385 -CA-GA---G----------------------------TAG---AAT---G----
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 18
s Ictidomys_tridecemlineatus.JH393364.1                    7520924 14 -   7955117 -CA-GA---G----------------------------TAG---AAT---G--CA
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 34
s Indri_indri.k141_3655594                                   22545 14 +     31101 -AA-GA---G----------------------------CAG---AAT---A--TA
i Indri_indri.k141_3655594                               C 0 I 4
s Jaculus_jaculus.JH725527.1                               8276895  3 -   9596543 -CA-A--------------------------------------------------
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    14110 16 -     42476 -CA-GA---G----------------------------TAG---CAT-ATA--GA
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 9
s Lemur_catta.scaffold_24                                 15524107 14 -  30322482 -AA-GC---G----------------------------TAG---AAT---A--TA
i Lemur_catta.scaffold_24                                C 0 I 4
s Leontocebus_fuscicollis.k141_1820339                        7472 12 +     64341 ----GA---G----------------------------TAG---AAT---G--TA
i Leontocebus_fuscicollis.k141_1820339                   T 127 I 4
s Leontocebus_illigeri.k141_3350179                           4795 12 +      4941 ----GA---G----------------------------TAG---AAT---G--TA
i Leontocebus_illigeri.k141_3350179                      T 131 I 4
s Leontocebus_nigricollis.k141_4610752                        7513 12 +     35603 ----GA---G----------------------------TAG---AAT---G--TA
i Leontocebus_nigricollis.k141_4610752                   T 131 I 4
s Leontopithecus_chrysomelas.k141_1519602                    28974 12 +     38576 ----GA---G----------------------------TAC---AAT---G--TA
i Leontopithecus_chrysomelas.k141_1519602                T 102 I 4
s Leontopithecus_rosalia.k141_464620                         25671 12 +     66356 ----GA---G----------------------------TAC---AAT---G--TA
i Leontopithecus_rosalia.k141_464620                     T 102 I 4
s Lepilemur_ankaranensis.k141_596936                         11001 14 -     23766 -AA-GA---G----------------------------TAG---AAA---A--TG
i Lepilemur_ankaranensis.k141_596936                     C 0 I 4
s Lepilemur_dorsalis.k141_577674                             29062 14 +     45836 -AA-GA---G----------------------------TAG---AAA---A--TG
i Lepilemur_dorsalis.k141_577674                         C 0 I 4
s Lepilemur_ruficaudatus.k141_121139                          1602 14 +     25010 -AA-GA---G----------------------------TAG---AAA---A--TG
i Lepilemur_ruficaudatus.k141_121139                     C 0 I 4
s Lepilemur_septentrionalis.k141_185316                      26998 14 +     54090 -AA-GA---G----------------------------TAG---AAA---A--TG
i Lepilemur_septentrionalis.k141_185316                  C 0 I 4
s Leptonychotes_weddellii.KB714746.1                       3042824 14 +   3914936 -TA-GA---G----------------------------TGG---AAT---G--CA
i Leptonychotes_weddellii.KB714746.1                     C 0 I 9
s Lepus_americanus.LepAme_scaffold_107385                     6477 14 -     14121 -CA-GA---G----------------------------TAG---ACT---G--AG
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 4
s Lophocebus_aterrimus.ctg367                              1437160 12 +   1826925 ----GA---G----------------------------TAG---ACT---G--TA
i Lophocebus_aterrimus.ctg367                            T 99 I 4
s Loris_lydekkerianus.k141_2539221                            5903 14 +     11245 -AA-TA---G----------------------------TAG---AAT---G--TA
i Loris_lydekkerianus.k141_2539221                       C 0 I 4
s Loris_tardigradus.ctg83                                  1004723 14 +   6120653 -AA-TA---G----------------------------TAG---AAT---G--TA
i Loris_tardigradus.ctg83                                C 0 I 4
s Loxodonta_africana.GL010049.1                            4217306 14 -  43346337 -CA-GA---A----------------------------TAG---AAT---G--GA
i Loxodonta_africana.GL010049.1                          C 0 I 9
s Lycaon_pictus.CM007581.1                                17955096 14 -  59628241 -TA-GA---G----------------------------TGG---AAT---G--CA
i Lycaon_pictus.CM007581.1                               C 0 I 9
s Macaca_arctoides.k141_2326796                               6970 12 +     40492 ----GA---G----------------------------TAT---AAT---G--TA
i Macaca_arctoides.k141_2326796                          T 105 I 4
s Macaca_assamensis.Contig5                               59676235  6 +  60120075 --------------------------------------------AAT---G--TA
i Macaca_assamensis.Contig5                              T 99 I 4
s Macaca_cyclopis.k119_18836                                 12742 12 -     26193 ----ga---g----------------------------tat---aat---g--ta
i Macaca_cyclopis.k119_18836                             T 105 I 4
s Macaca_fascicularis.k141_814140                            80526 12 -    114318 ----ga---g----------------------------tat---aat---g--ta
i Macaca_fascicularis.k141_814140                        T 105 I 4
s Macaca_fuscata.k119_255327                                  6217 12 -     23192 ----ga---g----------------------------tat---aat---g--ta
i Macaca_fuscata.k119_255327                             T 105 I 4
s Macaca_leonina.k141_3550399                                15686 12 -     29190 ----ga---g----------------------------tat---aat---a--ta
i Macaca_leonina.k141_3550399                            T 105 I 4
s Macaca_maura.k141_2733130                                  24251 12 +     37952 ----GA---G----------------------------TAT---AAT---G--TA
i Macaca_maura.k141_2733130                              T 105 I 4
s Macaca_mulatta.NC_041758.1                             186839340 12 + 187317192 ----GA---G----------------------------TAT---AAt---g--ta
i Macaca_mulatta.NC_041758.1                             T 105 I 4
s Macaca_nemestrina.KQ007038.1                            25457903 12 -  25927173 ----GA---G----------------------------TAT---AAt---g--ta
i Macaca_nemestrina.KQ007038.1                           T 105 I 4
s Macaca_nigra.k141_1655396                                  80099 12 +     89720 ----GA---G----------------------------TAT---AAT---G--TA
i Macaca_nigra.k141_1655396                              T 105 I 4
s Macaca_radiata.k141_3680011                                 7100 12 +     20474 ----GA---G----------------------------TAT---AAT---G--TA
i Macaca_radiata.k141_3680011                            T 105 I 4
s Macaca_siberu.k141_635500                                   6900 12 -     14993 ----ga---g----------------------------tat---aat---g--ta
i Macaca_siberu.k141_635500                              T 105 I 4
s Macaca_silenus.Contig273                                  329766 12 -    668171 ----ga---g----------------------------tat---aat---g--ta
i Macaca_silenus.Contig273                               T 105 I 4
s Macaca_thibetana.k99_256239                                 5216 12 -     24072 ----Ga---g----------------------------tat---aat---g--ta
i Macaca_thibetana.k99_256239                            T 105 I 4
s Macaca_tonkeana.k141_1498238                               25838 12 -     45290 ----ga---g----------------------------tat---aat---g--ta
i Macaca_tonkeana.k141_1498238                           T 105 I 4
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90598  8 +     94391 -CA-GC---A----------------------------TAG--------------
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 13
s Mandrillus_leucophaeus.scaffold280                      23937433 12 -  24302211 ----ga---g----------------------------tag---act---g--ta
i Mandrillus_leucophaeus.scaffold280                     T 101 I 4
s Mandrillus_sphinx.Contig270                               351561 12 +    752769 ----GA---G----------------------------TAG---ACT---G--TA
i Mandrillus_sphinx.Contig270                            T 97 I 4
s Manis_javanica.JSZB01003497.1                              18484  4 +    737560 -CA-GA-------------------------------------------------
i Manis_javanica.JSZB01003497.1                          C 0 I 9
s Manis_pentadactyla.KN006162.1                              50473  4 -    317179 -CA-GA-------------------------------------------------
i Manis_pentadactyla.KN006162.1                          C 0 I 9
s Marmota_marmota.CZRN01000018.1                          33103120 14 -  40650429 -CA-GA---G----------------------------TAG---AAT---G--CA
i Marmota_marmota.CZRN01000018.1                         C 0 I 38
s Megaderma_lyra.MegLyr_scaffold_4542                        10315  8 -    207569 -CA-AA---G----------------------------CAG--------------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 15
s Mellivora_capensis.MelCap_flattened_line_69365             10024 14 +     13704 -TA-AA---G----------------------------TGG---AAT---G--CA
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 9
s Mico_argentatus.k141_1239457                                5750 12 -      7380 ----ga---g----------------------------tag---aat---g--ta
i Mico_argentatus.k141_1239457                           T 103 I 4
s Mico_humeralifer.k141_1976199                               4823 12 +     18990 ----GA---G----------------------------TAG---AAT---G--TA
i Mico_humeralifer.k141_1976199                          C 0 I 4
s Mico_schneideri.k141_1950671                                      5762 12 -      7356 ----ga---g----------------------------tag---aat---g--ta
i Mico_schneideri.k141_1950671                                 T 103 I 4
s Microcebus_murinus.CM007674.1                           18291527 14 -  93316391 -AA-GA---G----------------------------tag---aat---a--tt
i Microcebus_murinus.CM007674.1                          C 0 I 4
s Microgale_talazaci.MicTal_scaffold_6613                    22124 14 -    145209 -TA-GA---G----------------------------TGA---AAT---G--TA
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 9
s Micronycteris_hirsuta.MicHir_scaffold_52381                15631 14 -     19307 -CA-GA---G----------------------------TAG---AAT---G--TA
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 8
s Miniopterus_natalensis.LDJU01000034.1                    1850605  6 +   8254450 ----------------------------------------------T-ATA--TA
i Miniopterus_natalensis.LDJU01000034.1                  T 143 I 9
s Miniopterus_schreibersii.MinSch_scaffold_18080             34286  6 +     64694 ----------------------------------------------T-ATA--TA
i Miniopterus_schreibersii.MinSch_scaffold_18080         T 143 I 9
s Miopithecus_ogouensis.k141_534055                           9158 12 -     28506 ----ga---g----------------------------tag---aat---g--ta
i Miopithecus_ogouensis.k141_534055                      T 87 I 4
s Mirounga_angustirostris.MirAng_flattened_line_93702         5692 14 -      8324 -TA-GA---G----------------------------TGG---AAT---G--CA
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 9
s Mirza_zaza.k141_952172                                      9072 14 -     37649 -AA-GA---G----------------------------TAG---AAT---A--TA
i Mirza_zaza.k141_952172                                 C 0 I 4
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141596 14 -    366855 -CT-GA---G----------------------------TAG---AAT---G--TA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 9
s Mungos_mungo.MunMun_flattened_line_23663                   35401 14 +     37127 -TA-GA---G----------------------------TGG---AAT---G--CA
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 9
s Murina_feae.MurFea_scaffold_85699                           6791 16 +     14753 -CA-GA---G----------------------------TAG---CAT-ATA--GA
i Murina_feae.MurFea_scaffold_85699                      C 0 I 9
s Mustela_putorius.JH418006.1                               301215 14 -  14710649 -TA-AA---G----------------------------TGG---AAT---G--CA
i Mustela_putorius.JH418006.1                            C 0 I 9
s Myocastor_coypus.MyoCoy_scaffold_10123                     71292 14 -     80779 -TG-GA---G----------------------------TGC---AGT---G--TA
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 I 17
s Myotis_brandtii.KE162005.1                                280434 16 -  10118263 -CA-GA---G----------------------------TAG---CAT-ATA--GA
i Myotis_brandtii.KE162005.1                             C 0 I 9
s Myotis_davidii.KB100139.1                                1587702 16 -   6019432 -CA-GA---A----------------------------TAG---CAT-ATA--CA
i Myotis_davidii.KB100139.1                              C 0 I 7
s Myotis_lucifugus.GL429869.1                              3903788 16 -   4330536 -CA-GA---G----------------------------TAG---CAT-ATA--GA
i Myotis_lucifugus.GL429869.1                            C 0 I 9
s Myotis_myotis.MyoMyo_scaffold_482318                         462 16 -       721 -CA-GA---G----------------------------TAG---CAT-ATA--GA
i Myotis_myotis.MyoMyo_scaffold_482318                   C 0 I 9
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189239 14 +    196477 -CA-GA---G----------------------------TAG---AAT---A--TA
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 I 9
s Nasalis_larvatus.k141_413338                               15133 12 +     21681 ----GA---G----------------------------TAG---AAT---G--TA
i Nasalis_larvatus.k141_413338                           T 109 I 4
s Nannospalax_galili.KL204047.1                            2034163  2 -   3037898 -CA----------------------------------------------------
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20306946 14 +  31847680 -TA-GA---G----------------------------TGG---AAT---G--CA
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 9
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149358 14 -   9404916 -TA-GA---G----------------------------TGG---AAT---G--CA
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 9
s Nycticebus_bengalensis.LG01                            102586268 14 - 196305487 -AA-TA---G----------------------------TAG---AAT---G--TA
i Nycticebus_bengalensis.LG01                            C 0 I 4
s Nycticebus_coucang.k141_1127096                              192 14 +      2075 -AA-TA---G----------------------------TAG---AAT---G--TA
i Nycticebus_coucang.k141_1127096                        C 0 I 4
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761622 14 + 199412804 -AA-TA---G----------------------------TAG---AAT---G--TA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 4
s Ochotona_princeps.JH802162.1                             1363500 14 +   3988456 -CA-Ga---g----------------------------tag---aat---g--aa
i Ochotona_princeps.JH802162.1                           C 0 I 4
s Octodon_degus.JH651603.1                                  746902 14 +  11899542 -TA-GG---G----------------------------TAC---AAT---G--ta
i Octodon_degus.JH651603.1                               C 0 I 17
s Odobenus_rosmarus.KB229312.1                              506631 14 -   2017862 -TA-GA---G----------------------------TGG---AAT---G--CA
i Odobenus_rosmarus.KB229312.1                           C 0 I 9
s Orycteropus_afer.OryAfe_flattened_line_144387               9824 14 -     18566 -CA-AA---G----------------------------TAG---GAT---A--TA
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 I 9
s Oryctolagus_cuniculus.CM000791.1                        67147358 14 + 174332312 -CA-GA---G----------------------------TAT---Aat---g--ag
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 4
s Otocyon_megalotis.JAEUCK010005147.1                       462326 14 -    559221 -TA-GA---G----------------------------TGG---AAC---G--CA
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 9
s Otolemur_crassicaudatus.k141_222918                         4187 14 +      8798 -AA-GA---G----------------------------TAA---AAT---G--TA
i Otolemur_crassicaudatus.k141_222918                    C 0 I 4
s Otolemur_garnettii.GL873799.1                             696350 14 -   1103335 -AA-GA---G----------------------------TAA---AAT---G--TA
i Otolemur_garnettii.GL873799.1                          C 0 I 4
s Pan_paniscus.KQ411613.1                                    44087 12 +     80009 ----GA---G----------------------------TTG---AAT---G--TA
i Pan_paniscus.KQ411613.1                                T 115 I 4
s Pan_troglodytes.KZ622849.1                                 22404 15 +    110857 aaa-ga---a----------------------------aag---aaa---g--ga
i Pan_troglodytes.KZ622849.1                             C 0 T 87
s Panthera_onca.PanOnc_flattened_line_3271                  151151 14 +    230217 -TA-GA---A----------------------------TGG---AAT---G--CA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 9
s Panthera_pardus.KV860321.1                                264360 14 +  18783137 -TA-GA---A----------------------------TGG---AAT---G--CA
i Panthera_pardus.KV860321.1                             C 0 I 9
s Panthera_tigris.KE722367.1                               4721239 14 -   8748460 -TA-GA---A----------------------------TGG---AAT---G--CA
i Panthera_tigris.KE722367.1                             C 0 I 9
s Papio_anubis.CM001495.2                                183443183 12 + 183742232 ----GA---G----------------------------TAG---ACT---G--Ta
i Papio_anubis.CM001495.2                                T 153 I 4
s Papio_cynocephalus.k141_4307930                             6881 12 +     20448 ----GA---G----------------------------TAG---ACT---G--TA
i Papio_cynocephalus.k141_4307930                        T 101 I 4
s Papio_hamadryas.Contig39                                20563689 12 +  20919399 ----GA---G----------------------------TAG---ACT---G--TA
i Papio_hamadryas.Contig39                               T 105 I 4
s Papio_kindae.k141_1936966                                   5625 12 +     41871 ----GA---G----------------------------TAG---ACT---G--TA
i Papio_kindae.k141_1936966                              T 101 I 4
s Papio_papio.k141_802527                                     8910 12 +     27711 ----GA---G----------------------------TAG---ACT---G--TA
i Papio_papio.k141_802527                                T 109 I 4
s Papio_ursinus.k141_3428135                                  8991 12 +      9205 ----GA---G----------------------------TAG---ACT---G--TA
i Papio_ursinus.k141_3428135                             T 97 I 4
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12633 14 -     78924 -TA-GA---G----------------------------TGG---AAA---G--CA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 9
s Perodicticus_ibeanus.k141_855320                           10157 14 +     13100 -AA-GA---G----------------------------TAG---AAT---G--TA
i Perodicticus_ibeanus.k141_855320                       C 0 I 4
s Perodicticus_potto.k141_1092580                             8563 14 +     25941 -AA-GA---G----------------------------TAG---AAT---G--TA
i Perodicticus_potto.k141_1092580                        C 0 I 4
s Petromus_typicus.PetTyp_scaffold_42190                     28179 11 -     29689 -CA-GA---G----------------------------TGG---AAT--------
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 I 14
s Piliocolobus_badius.k141_1234363                           43644  9 +     62158 ----GA---G----------------------------TAG---AAT--------
i Piliocolobus_badius.k141_1234363                       T 93 I 7
s Piliocolobus_gordonorum.k141_381342                        38375 12 +     89929 ----GA---G----------------------------TAG---AAT---G--TA
i Piliocolobus_gordonorum.k141_381342                    T 109 I 4
s Piliocolobus_kirkii.k141_448987                            39791 12 +     51399 ----GA---G----------------------------TAG---AAT---G--TA
i Piliocolobus_kirkii.k141_448987                        T 109 I 4
s Piliocolobus_tephrosceles.PDMG02000141.1                14296029 12 -  14605196 ----GA---G----------------------------TAG---AAT---G--TA
i Piliocolobus_tephrosceles.PDMG02000141.1               T 109 I 4
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1738 16 +     22620 -CA-GA---G----------------------------CAG---CAT-ATA--GG
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 9
s Pongo_abelii.CM009266.2                                189131129 12 + 189387572 ----GA---G----------------------------TAG---AAT---G--TA
i Pongo_abelii.CM009266.2                                T 112 I 4
s Pongo_pygmaeus.ctg66                                     9570737 12 +   9816681 ----GA---G----------------------------TAG---AAT---G--TA
i Pongo_pygmaeus.ctg66                                   T 110 I 4
s Presbytis_comata.k141_677006                               73313 12 -     81375 ----ga---g----------------------------tag---aat---g--ta
i Presbytis_comata.k141_677006                           T 105 I 4
s Presbytis_mitrata.k141_1087752                              5133 12 +     19060 ----GA---G----------------------------TAG---AAT---G--TA
i Presbytis_mitrata.k141_1087752                         T 105 I 4
s Procavia_capensis.ProCapCap_scaffold_85530                 13333 14 -     22811 -CA-GA---G----------------------------CAG---AAT---G--TA
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 I 9
s Prolemur_simus.MPIZ01000396.1                            2596787 14 -   4620579 -AA-GC---G----------------------------TAG---AAT---A--TA
i Prolemur_simus.MPIZ01000396.1                          C 0 I 4
s Propithecus_coquerelli.NW_012148875.1                     990768 14 +   2598838 -AA-GA---G----------------------------TAG---AAT---A--TA
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 4
s Propithecus_coronatus.k141_347390                          29080 14 +     38485 -AA-GA---G----------------------------TAG---AAT---A--TA
i Propithecus_coronatus.k141_347390                      C 0 I 4
s Propithecus_diadema.k141_58108                              1123 14 -     13098 -AA-GA---G----------------------------TAG---AAT---A--TA
i Propithecus_diadema.k141_58108                         C 0 I 4
s Propithecus_edwardsi.k141_1176054                          26601 14 +     35766 -AA-GA---G----------------------------TAG---AAT---A--TA
i Propithecus_edwardsi.k141_1176054                      C 0 I 4
s Propithecus_perrieri.k141_1200571                           4788 14 -     24134 -AA-GA---G----------------------------TAG---AAT---A--TA
i Propithecus_perrieri.k141_1200571                      C 0 I 4
s Propithecus_tattersalli.k141_790011                        28613 14 -     67325 -AA-AA---G----------------------------TAG---AAT---A--TA
i Propithecus_tattersalli.k141_790011                    C 0 I 4
s Propithecus_verreauxi.k141_956661                           4836 14 -      6182 -AA-GA---G----------------------------TAG---AAT---A--TA
i Propithecus_verreauxi.k141_956661                      C 0 I 4
s Pteronotus_parnellii.KE909381.1                            15049 14 -     21811 -CA-GA---G----------------------------TAG---AAC---A--CA
i Pteronotus_parnellii.KE909381.1                        C 0 I 9
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40214 14 +     42204 -TA-AA---G----------------------------TGG---AAT---G--CA
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 9
s Pteropus_alecto.KB030862.1                              22976766  8 +  28871421 -TA-GC---A----------------------------TAA--------------
i Pteropus_alecto.KB030862.1                             C 0 I 13
s Pteropus_vampyrus.KN534172.1                                6819  8 -      8028 -TA-GC---A----------------------------TAA--------------
i Pteropus_vampyrus.KN534172.1                           C 0 I 13
s Puma_concolor.QAVW01001104.1                            20274305 14 -  38429054 -TA-GA---A----------------------------TGG---AAT---G--CA
i Puma_concolor.QAVW01001104.1                           C 0 I 9
s Pygathrix_cinerea.k141_1153803                             15142 12 -     91421 ----ga---g----------------------------tag---aat---g--ta
i Pygathrix_cinerea.k141_1153803                         T 109 I 4
s Pygathrix_nigripes_b.ctg100                                 7609262 12 +   7812017 ----GA---G----------------------------TAG---AAT---G--TA
i Pygathrix_nigripes_b.ctg100                               T 109 I 4
s Pygathrix_nigripes_a.k141_215492                             15114 12 -     72585 ----ga---g----------------------------tag---aat---g--ta
i Pygathrix_nigripes_a.k141_215492                         T 109 I 4
s Rhinopithecus_bieti.k119_217274                             6828 12 -     11128 ----GA---G----------------------------Tag---aat---g--ta
i Rhinopithecus_bieti.k119_217274                        T 108 I 4
s Rhinopithecus_roxellana.NC_044550.1                     91236181 12 - 195417433 ----GA---G----------------------------TAG---AAT---G--TA
i Rhinopithecus_roxellana.NC_044550.1                    T 102 I 4
s Rhinopithecus_strykeri.ctg102                            7671833 12 +   7961872 ----GA---G----------------------------TAG---AAT---G--TA
i Rhinopithecus_strykeri.ctg102                          T 108 I 4
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87787  8 -     96226 -CA-AC---A----------------------------TAA--------------
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 13
s Saguinus_bicolor.k141_2619299                               8150 11 -      8359 -----a---c----------------------------tag---aat---g--ta
i Saguinus_bicolor.k141_2619299                          T 126 I 4
s Saguinus_imperator.k141_2524406                             2107 12 +      2197 ----GA---G----------------------------TAG---AAT---G--TA
i Saguinus_imperator.k141_2524406                        C 0 I 4
s Saguinus_inustus.k141_699149                               13526 12 +     13640 ----GA---G----------------------------TAG---AAT---G--TA
i Saguinus_inustus.k141_699149                           C 0 I 4
s Saguinus_labiatus.k141_285685                               8395 12 +      8564 ----GA---C----------------------------TAG---AAT---G--TA
i Saguinus_labiatus.k141_285685                          T 115 I 4
s Saguinus_midas.LG03                                    209469245 12 + 209938924 ----GA---G----------------------------TAG---AAT---G--TA
i Saguinus_midas.LG03                                    T 119 I 4
s Saguinus_mystax.k141_374627                                 7951 12 -      9399 ----ga---g----------------------------tag---aat---g--ta
i Saguinus_mystax.k141_374627                            T 127 I 4
s Saimiri_boliviensis.NW_024100920.1                     119950863 12 - 121099817 ----GA---G----------------------------TAG---AAT---G--TA
i Saimiri_boliviensis.NW_024100920.1                     T 68 I 4
s Saimiri_cassiquiarensis.k141_2188234                       23319 12 +     46362 ----GA---G----------------------------TAG---AAT---G--TA
i Saimiri_cassiquiarensis.k141_2188234                   C 0 I 4
s Saimiri_macrodon.k141_716185                               23414 12 +     45824 ----GA---G----------------------------TAG---AAT---G--TA
i Saimiri_macrodon.k141_716185                           C 0 I 4
s Saimiri_oerstedii.k141_1487881                             40042 12 -     64574 ----ga---g----------------------------tag---aat---g--ta
i Saimiri_oerstedii.k141_1487881                         T 68 I 4
s Saimiri_sciureus.k141_2278166                               3048 12 -     23631 ----ga---g----------------------------tag---aat---g--ta
i Saimiri_sciureus.k141_2278166                          T 68 I 4
s Saimiri_ustus.k141_1484609                                 23310 12 -     61129 ----ga---g----------------------------tag---aat---g--ta
i Saimiri_ustus.k141_1484609                             T 67 I 4
s Sapajus_apella.ctg103                                    5420633 12 -   5703754 ----ga---g----------------------------tag---aat---g--ta
i Sapajus_apella.ctg103                                  T 183 I 4
s Sapajus_macrocephalus.k141_351809                          55674 12 -     80660 ----ga---g----------------------------tag---aat---g--ta
i Sapajus_macrocephalus.k141_351809                      T 185 I 4
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153195 14 -    313613 -CA-GA---A----------------------------TAG---AAT---A--TA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 9
s Semnopithecus_entellus.k141_11662                          19653 12 -     19888 ----GA---G----------------------------TAG---AAT---G--TA
i Semnopithecus_entellus.k141_11662                      C 0 I 4
s Semnopithecus_hypoleucos.k141_1615806                      26856 12 +     39453 ----GA---G----------------------------TAG---AAT---G--TA
i Semnopithecus_hypoleucos.k141_1615806                  T 109 I 4
s Semnopithecus_johnii.k141_670120                            7375 12 +     27826 ----GA---G----------------------------TAG---AAT---G--TA
i Semnopithecus_johnii.k141_670120                       T 109 I 4
s Semnopithecus_priam.k141_638794                             6896 12 -     19483 ----ga---g----------------------------tag---aat---g--ta
i Semnopithecus_priam.k141_638794                        T 109 I 4
s Semnopithecus_schistaceus.k141_1584426                      6964 12 +      7198 ----GA---G----------------------------TAG---AAT---G--TA
i Semnopithecus_schistaceus.k141_1584426                 C 0 I 4
s Semnopithecus_vetulus.k141_1200928                         15222 12 +     15514 ----GA---G----------------------------TAG---AAT---G--TA
i Semnopithecus_vetulus.k141_1200928                     C 0 I 4
s Solenodon_paradoxus.SolPar_flattened_line_126               3755 14 +   1910179 -CA-GA---G----------------------------CAC---AAT---A--TG
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 9
s Sorex_araneus.JH798187.1                                13651001 14 -  18376816 -CA-GA---G----------------------------AAC---AAT---A--TA
i Sorex_araneus.JH798187.1                               C 0 I 9
s Spermophilus_dauricus.KZ294078.1                         1953975 14 -   3870691 -CA-GA---G----------------------------TAG---AAT---G--CA
i Spermophilus_dauricus.KZ294078.1                       C 0 I 38
s Spilogale_gracilis.SpiGra_flattened_line_13525             30715 14 +     97271 -TA-GT---G----------------------------TGG---AAT---G--CA
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 9
s Suricata_suricatta.SurSur_flattened_line_6629              18302 14 -    196729 -TA-GA---G----------------------------TGG---AAT---G--CA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 9
s Sus_scrofa.CM000828.4                                    6810477 14 +  69701581 -CA-GA---G----------------------------TAG---AAT---A--TA
i Sus_scrofa.CM000828.4                                  C 0 I 9
s Tadarida_brasiliensis.TadBra_scaffold_25820                10779 10 +     41958 -CA-GA---G----------------------------TAG---TA---------
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 12
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72600 14 +    116680 -CA-GA---G----------------------------TAG---AAT---A--TA
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 I 9
s Tapirus_indicus.TapInd_scaffold_9301                      118732 14 -    156842 -CA-GA---G----------------------------TAG---AAT---G--TA
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 9
s Tapirus_terrestris.TapTer_scaffold_755                    387189 14 +    539355 -CA-GA---G----------------------------TAG---AAT---G--TA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 9
s Tarsius_lariang.k141_2201908                               26409 12 +     70052 ----ga---g----------------------------tag---aat---g--ga
i Tarsius_lariang.k141_2201908                           T 104 I 104
s Tarsius_wallacei.k141_254427                                1242 12 -     16117 ----ga---g----------------------------tag---aat---g--ga
i Tarsius_wallacei.k141_254427                           T 68 C 0
s Theropithecus_gelada.CM009954.1                        186428553 12 + 186847797 ----GA---G----------------------------TAG---ACT---G--Ta
i Theropithecus_gelada.CM009954.1                        T 101 I 4
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105493 14 +    114563 -CA-GA---G----------------------------TAG---AAG---G--TA
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 17
s Tolypeutes_matacus.TolMat_scaffold_228639                   6383 14 +      8208 -CA-GA---G----------------------------CAG---AAC---G--TA
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 I 9
s Tonatia_saurophila.TonSau_scaffold_294                     81170 14 +    610378 -CA-GA---G----------------------------AAT---AAT---G--TG
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 10
s Trachypithecus_auratus.k141_722599                         10947 12 -     20410 ----ga---g----------------------------tag---aat---g--ta
i Trachypithecus_auratus.k141_722599                     T 109 I 4
s Trachypithecus_crepusculus.k141_582567                        61 12 -     12674 ----ga---g----------------------------tag---aat---g--ta
i Trachypithecus_crepusculus.k141_582567                 T 109 I 4
s Trachypithecus_cristatus.k141_580354                       11048 12 +     19930 ----GA---G----------------------------TAG---AAT---G--TA
i Trachypithecus_cristatus.k141_580354                   T 109 I 4
s Trachypithecus_francoisi.k141_1412647                       7475 12 -     19997 ----ga---g----------------------------tag---aat---g--ta
i Trachypithecus_francoisi.k141_1412647                  T 93 I 4
s Trachypithecus_geei.k141_277701                            47599 12 -     60166 ----ga---g----------------------------tag---aat---g--ta
i Trachypithecus_geei.k141_277701                        T 108 I 4
s Trachypithecus_germaini.k141_912491                        15070 12 -     27529 ----ga---g----------------------------tag---aat---g--ta
i Trachypithecus_germaini.k141_912491                    T 109 I 4
s Trachypithecus_hatinhensis.k141_143409                     15014 12 -     18194 ----ga---g----------------------------tag---aat---g--ta
i Trachypithecus_hatinhensis.k141_143409                 T 109 I 4
s Trachypithecus_laotum.k141_907409                           8742 12 -     21137 ----ga---g----------------------------tag---aat---g--ta
i Trachypithecus_laotum.k141_907409                      T 93 I 4
s Trachypithecus_leucocephalus.k141_587342                    7445 12 -     10723 ----Ga---g----------------------------tag---aat---g--ta
i Trachypithecus_leucocephalus.k141_587342               T 93 I 4
s Trachypithecus_melamera.k141_434728                         6601 12 +      9834 ----GA---G----------------------------TAG---AAT---G--TA
i Trachypithecus_melamera.k141_434728                    T 109 I 4
s Trachypithecus_obscurus.k141_190785                        24914 12 +     32220 ----GA---G----------------------------TAG---AAT---G--TA
i Trachypithecus_obscurus.k141_190785                    T 109 I 4
s Trachypithecus_phayrei.ctg124                            5939016 12 +   6242583 ----GA---G----------------------------TAG---AAT---G--TA
i Trachypithecus_phayrei.ctg124                          T 109 I 4
s Trachypithecus_pileatus.k141_2007326                        8268 12 +     20839 ----GA---G----------------------------TAG---AAT---G--TA
i Trachypithecus_pileatus.k141_2007326                   T 108 I 4
s Trichechus_manatus.JH594705.1                            4293232 14 +  10818551 -ca-gg---g----------------------------tag---aat---g--ta
i Trichechus_manatus.JH594705.1                          C 0 I 9
s Tupaia_chinensis.KB320699.1                              2155654 13 +   4065304 -CC-AA---G----------------------------TAG---CAG---G--T-
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9305 13 -     10553 -CT-GA---G----------------------------TAG---AAT---G--T-
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   53301 13 -     77625 -TG-GA---G----------------------------AAA---AAT---A--T-
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 9
s Ursus_maritimus.KK499267.1                               4850420 14 -   5085361 -TA-GA---G----------------------------TGG---AAT---G--CA
i Ursus_maritimus.KK499267.1                             C 0 I 9
s Varecia_rubra.k141_590885                                  11447 14 +     50397 -AA-GT---G----------------------------TAG---AAT---A--TA
i Varecia_rubra.k141_590885                              C 0 I 4
s Varecia_variegata.k141_1128296                             11506 14 +     24756 -AA-GT---G----------------------------TAG---AAT---A--TA
i Varecia_variegata.k141_1128296                         C 0 I 4
s Vicugna_pacos.KN270157.1                                 5371858 14 -   5488506 -CA-GA---G----------------------------TAG---ATT---A--TA
i Vicugna_pacos.KN270157.1                               C 0 I 9
s Vulpes_lagopus.VulLag_flattened_line_30954                 10771 14 -     43706 -TA-AA---G----------------------------TGG---AAT---G--CA
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 9
s Xerus_inauris.XerIna_scaffold_2302                          1115 14 +    224448 -CA-GA---G----------------------------TAG---AAT---G--CA
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 38
s Zalophus_californianus.ZalCal_flattened_line_17732          5344 14 +     86975 -TA-GA---G----------------------------TGG---AAT---G--CA
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 9
s Zapus_hudsonius.ZapHud_scaffold_11398                      14991  3 +     63895 -CA-G--------------------------------------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Mus_pahari.LT608297.1                                   31355125 13 -  89631738 T
e Mus_spretus.CM004101.1                                  90752527 13 - 130317789 T
e Mus_musculus.chr8                                       87650466 13 - 129401213 T
e Mus_caroli.LT608237.1                                   84361468 13 - 120012414 T
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Sigmodon_hispidus.SigHis_scaffold_60841                    11982 13 -     12148 T
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570728 13 +  90668790 T
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Psammomys_obesus.NESX01036370.1                            10498 13 -     21651 T
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Peromyscus_maniculatus.KI615324.1                       18194880 13 -  18517816 T
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80254 13 +    102263 T
e Ondatra_zibethicus.OndZib_scaffold_46174                   25254 13 +     28053 T
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              5066 31 +     14296 T
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11260586 13 -  27267610 T
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182348 13 -  29670104 T
e Meriones_unguiculatus.MerUng_scaffold_7390                 32854 13 +    140813 T
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32727 40 +     78134 T
e Glis_glis.GliGli_scaffold_19807                            31485 39 +     49224 T
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Ellobius_talpinus.LOJH01081419.1                             538 13 +      8657 T
e Ellobius_lutescens.LOEQ01008920.1                          20407 13 -    110024 T
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cricetulus_griseus.LT883664.1                           11667673 13 + 224834208 T
e Colobus_guereza.LG01                                   199948999 41 + 200372422 T
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     70906 13 +     87051 T

a score=0.000000
s hg38.chrUn_KI270753v1                                       6873  3 +     62944 ga------------a
s Acinonyx_jubatus.LLWD01001279.1                           827321  3 -   1699592 AA------------A
i Acinonyx_jubatus.LLWD01001279.1                        I 9 I 1
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510582  3 -  29979442 AA------------A
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 9 I 1
s Ailurus_fulgens.LNAC01001112.1                             79352  3 -    347723 AA------------A
i Ailurus_fulgens.LNAC01001112.1                         I 9 I 1
s Allenopithecus_nigroviridis.k141_3361533                   14684  3 -     52922 aa------------a
i Allenopithecus_nigroviridis.k141_3361533               I 4 I 1
s Allochrocebus_lhoesti.k141_4309873                         14620  3 -     28001 aa------------a
i Allochrocebus_lhoesti.k141_4309873                     I 4 I 1
s Allochrocebus_preussi.k141_1442296                          5116  3 -     18505 aa------------a
i Allochrocebus_preussi.k141_1442296                     I 4 I 1
s Allochrocebus_solatus.k141_166128                           5970  3 -     12518 aa------------a
i Allochrocebus_solatus.k141_166128                      I 4 I 1
s Alouatta_belzebul.k141_3560514                              7436 15 +     51355 aaagaagaaagagaa
i Alouatta_belzebul.k141_3560514                         I 4 I 1
s Alouatta_caraya.k141_1701091                                 558 15 -     36483 aaagaagaaagagaa
i Alouatta_caraya.k141_1701091                           I 4 I 1
s Alouatta_discolor.k141_743489                               3622  2 -     45847 AA-------------
i Alouatta_discolor.k141_743489                          I 4 n 4
s Alouatta_juara.k141_1509701                                24827 15 +     25266 aaagaagaaagagaa
i Alouatta_juara.k141_1509701                            I 4 I 1
s Alouatta_macconnelli.k141_918386                             552 15 -      9457 aaagaagaaagagaa
i Alouatta_macconnelli.k141_918386                       I 4 I 1
s Alouatta_nigerrima.k141_3472759                            18130 15 -     18578 aaagaagaaagagaa
i Alouatta_nigerrima.k141_3472759                        I 4 I 1
s Alouatta_palliata.k141_2135620                              3529  3 +     47717 AA------------A
i Alouatta_palliata.k141_2135620                         I 4 I 1
s Alouatta_puruensis.k141_362188                               226 15 +      5663 aaagaagaaagagaa
i Alouatta_puruensis.k141_362188                         I 4 I 1
s Alouatta_seniculus.k141_117119                             14846 15 +     50774 AAAGAAGAAAGAGAA
i Alouatta_seniculus.k141_117119                         I 4 I 1
s Anoura_caudifer.AnoCau_scaffold_1412                      185347  3 +    412891 AA------------A
i Anoura_caudifer.AnoCau_scaffold_1412                   I 9 I 1
s Aotus_azarae.k141_3104676                                  15471  3 -     33861 aa------------a
i Aotus_azarae.k141_3104676                              I 4 I 1
s Aotus_griseimembra.k141_2240599                            15491  3 -     34016 aa------------a
i Aotus_griseimembra.k141_2240599                        I 4 I 1
s Aotus_nancymaae.KZ198451.1                               4297888  3 -   5030052 aa------------a
i Aotus_nancymaae.KZ198451.1                             I 4 I 1
s Aotus_trivirgatus.k141_2152450                             15493  3 -     34685 aa------------a
i Aotus_trivirgatus.k141_2152450                         I 4 I 1
s Aotus_vociferans.k141_344750                               28617  3 -     47192 aa------------a
i Aotus_vociferans.k141_344750                           I 4 I 1
s Arctocebus_calabarensis.k141_2318572                       11539  3 +     14667 AA------------A
i Arctocebus_calabarensis.k141_2318572                   I 4 I 1
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4756  3 +     43469 AA------------A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 9 I 1
s Avahi_laniger.k141_765380                                  53742  3 -     92717 AA------------A
i Avahi_laniger.k141_765380                              I 4 I 1
s Avahi_peyrierasi.k141_1424874                              54369  3 +     85213 AA------------A
i Avahi_peyrierasi.k141_1424874                          I 4 I 1
s Callibella_humilis.k141_1278103                             5226  3 -     10423 aa------------a
i Callibella_humilis.k141_1278103                        I 4 I 1
s Callimico_goeldii.k141_1091182                             24697  2 +     31915 -a------------a
i Callimico_goeldii.k141_1091182                         I 3 I 1
s Callithrix_geoffroyi.k119_512088                            5192  3 +      5267 aa------------a
i Callithrix_geoffroyi.k119_512088                       I 4 I 1
s Callithrix_jacchus.pat_scaffold_3                       23590406  3 - 189096842 aa------------a
i Callithrix_jacchus.pat_scaffold_3                      I 4 I 1
s Callithrix_kuhlii.k119_1164682                             11937  3 -     12001 AA------------A
i Callithrix_kuhlii.k119_1164682                         I 4 I 1
s Camelus_bactrianus.KN276810.1                           10002378  3 -  17673402 AA------------A
i Camelus_bactrianus.KN276810.1                          I 9 I 1
s Camelus_dromedarius.KN272107.1                           2334836  3 -   7040546 AA------------A
i Camelus_dromedarius.KN272107.1                         I 9 I 1
s Camelus_ferus.KB017975.1                                  403119  3 -   1652518 AA------------A
i Camelus_ferus.KB017975.1                               I 9 I 1
s CanFam4.chr16                                           17799171  3 -  60362399 AA------------A
i CanFam4.chr16                                          I 9 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    185228  3 -    185531 AA------------A
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 9 I 1
s Canis_lupus_dingo.QKWQ01000480.1                         9034614  3 -   9314153 AA------------A
i Canis_lupus_dingo.QKWQ01000480.1                       I 9 I 1
s Canis_lupus_familiaris.chr16                            17958879  3 -  59632846 AA------------A
i Canis_lupus_familiaris.chr16                           I 9 I 1
s Canis_lupus_orion.HG994398.1                            18500391  3 +  63665305 AA------------A
i Canis_lupus_orion.HG994398.1                           I 9 I 1
s Carlito_syrichta.NW_007247396.1                           201414  2 +    308752 -a------------g
i Carlito_syrichta.NW_007247396.1                        C 0 I 1
s Carollia_perspicillata.CarPer_scaffold_92756                5114  3 -     11696 AA------------A
i Carollia_perspicillata.CarPer_scaffold_92756           I 9 I 1
s Catagonus_wagneri.CatWag_scaffold_2839                     93008  3 +    217609 AA------------A
i Catagonus_wagneri.CatWag_scaffold_2839                 I 9 I 1
s Cebuella_niveiventris.k141_1251222                          9851  3 -     11392 aa------------a
i Cebuella_niveiventris.k141_1251222                     I 4 I 1
s Cebuella_pygmaea.k141_1309012                               5949  3 -      7577 aa------------a
i Cebuella_pygmaea.k141_1309012                          I 4 I 1
s Cebus_albifrons.Contig27                                25651978  3 +  26074798 aa------------a
i Cebus_albifrons.Contig27                               I 4 I 1
s Cebus_olivaceus.k141_398305                                 1554  3 +      1777 AT------------A
i Cebus_olivaceus.k141_398305                            I 4 I 1
s Cebus_unicolor.k141_544048                                 49891  3 -     74725 aa------------a
i Cebus_unicolor.k141_544048                             I 4 I 1
s Cephalopachus_bancanus.k141_1423433                         5419  2 +     31688 -a------------g
i Cephalopachus_bancanus.k141_1423433                    C 0 I 1
s Ceratotherium_simum.JH767749.1                          12231436  3 +  27778364 AA------------A
i Ceratotherium_simum.JH767749.1                         I 9 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2463  3 -     25243 AA------------A
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 9 I 1
s Cercocebus_atys.KQ010504.1                               4475629  3 +   4669795 aa------------a
i Cercocebus_atys.KQ010504.1                             I 4 I 1
s Cercocebus_chrysogaster.k141_393940                        14174  3 -     19203 aa------------a
i Cercocebus_chrysogaster.k141_393940                    I 4 I 1
s Cercocebus_lunulatus.k141_3342297                            790  3 -     14043 aa------------a
i Cercocebus_lunulatus.k141_3342297                      I 4 I 1
s Cercocebus_torquatus.k141_3057011                           8826  3 +     27781 aa------------a
i Cercocebus_torquatus.k141_3057011                      I 4 I 1
s Cercopithecus_ascanius.k141_1024104                         8991  3 -     20310 aa------------a
i Cercopithecus_ascanius.k141_1024104                    I 4 I 1
s Cercopithecus_cephus.k141_1078548                          11970  3 +     29689 aa------------a
i Cercopithecus_cephus.k141_1078548                      I 4 I 1
s Cercopithecus_diana.k141_1150327                            6724  3 -     20078 aa------------a
i Cercopithecus_diana.k141_1150327                       I 4 I 1
s Cercopithecus_hamlyni.k141_187466                          14647  3 -     27936 aa------------a
i Cercopithecus_hamlyni.k141_187466                      I 4 I 1
s Cercopithecus_lowei.k141_1854285                            3511  3 -     17152 aa------------a
i Cercopithecus_lowei.k141_1854285                       I 4 I 1
s Cercopithecus_albogularis.ctg5                                38817050  3 +  39242232 aa------------a
i Cercopithecus_albogularis.ctg5                               I 4 I 1
s Cercopithecus_mona.ctg39                                21222742  3 -  21565898 aa------------a
i Cercopithecus_mona.ctg39                               I 4 I 1
s Cercopithecus_neglectus.k141_2526306                       39860  3 -     53127 aa------------a
i Cercopithecus_neglectus.k141_2526306                   I 4 I 1
s Cercopithecus_nictitans.k141_1119848                         111  3 +     27489 aa------------a
i Cercopithecus_nictitans.k141_1119848                   I 4 I 1
s Cercopithecus_petaurista.k141_807961                       14660  3 -     27947 aa------------a
i Cercopithecus_petaurista.k141_807961                   I 4 I 1
s Cercopithecus_pogonias.k141_822820                         14636  3 +     17596 aa------------a
i Cercopithecus_pogonias.k141_822820                     I 4 I 1
s Cercopithecus_roloway.k141_2581234                           683  3 +     14005 aa------------a
i Cercopithecus_roloway.k141_2581234                     I 4 I 1
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             533  3 -      8501 AA------------A
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       I 9 I 1
s Cheirogaleus_major.k141_333249                             21123  3 -     52598 AA------------A
i Cheirogaleus_major.k141_333249                         I 6 I 1
s Cheirogaleus_medius.k141_1055463                           16488  3 +     57038 AA------------A
i Cheirogaleus_medius.k141_1055463                       I 6 I 1
s Chiropotes_albinasus.k141_2813271                          11103  3 +     11226 AA------------A
i Chiropotes_albinasus.k141_2813271                      I 4 I 7
s Chlorocebus_aethiops.ctg25                              18428620  3 -  18827391 aa------------a
i Chlorocebus_aethiops.ctg25                             I 4 I 1
s Chlorocebus_pygerythrus.k141_1025673                       15057  3 -     50209 aa------------a
i Chlorocebus_pygerythrus.k141_1025673                   I 4 I 1
s Chlorocebus_sabaeus.CM001947.1                         135422057  3 + 135778131 aa------------a
i Chlorocebus_sabaeus.CM001947.1                         I 4 I 1
s Choloepus_didactylus.ChoDid_scaffold_45914                 18311  3 +     19366 AA------------A
i Choloepus_didactylus.ChoDid_scaffold_45914             I 9 I 1
s Choloepus_hoffmanni.KN194906.1                            173387  3 +    839153 AA------------A
i Choloepus_hoffmanni.KN194906.1                         I 9 I 1
s Colobus_angolensis.KN981557.1                            1910562  3 +   2368649 aa------------a
i Colobus_angolensis.KN981557.1                          I 4 I 1
s Colobus_polykomos.k141_906115                              37100  3 +     84244 aa------------a
i Colobus_polykomos.k141_906115                          I 4 I 100
s Condylura_cristata.JH655891.1                           17548103  3 -  53390261 AA------------G
i Condylura_cristata.JH655891.1                          I 9 I 1
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14403  3 -     20389 AA------------A
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 15 I 1
s Crocidura_indochinensis.CroInd_scaffold_37019               2994  3 -     19598 AA------------G
i Crocidura_indochinensis.CroInd_scaffold_37019          I 9 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28492  3 -     87169 AA------------A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 9 I 1
s Dasypus_novemcinctus.JH564415.1                            63540  3 +   2246927 AA------------A
i Dasypus_novemcinctus.JH564415.1                        I 9 I 1
s Daubentonia_madagascariensis.ctg71                      12537340  3 -  12879189 AA------------A
i Daubentonia_madagascariensis.ctg71                     I 4 I 1
s Desmodus_rotundus.KZ672289.1                             8630127  3 +  20541912 GA------------A
i Desmodus_rotundus.KZ672289.1                           I 9 I 1
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673287  3 +   1390856 AA------------A
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 9 I 1
s Diceros_bicornis.DicBicMic_scaffold_5955                    6039  3 +    198055 AA------------A
i Diceros_bicornis.DicBicMic_scaffold_5955               I 9 I 1
s Echinops_telfairi.JH980293.1                            48780400  3 + 111700974 AA------------A
i Echinops_telfairi.JH980293.1                           I 9 I 1
s Eidolon_helvum.KE759718.1                                  10528  3 +     11740 AA------------A
i Eidolon_helvum.KE759718.1                              I 13 I 1
s Enhydra_lutris.KZ291758.1                               16329310  3 -  41312741 AA------------A
i Enhydra_lutris.KZ291758.1                              I 9 I 1
s Eptesicus_fuscus.JH977646.1                              2145719  3 -  14770903 CA------------A
i Eptesicus_fuscus.JH977646.1                            I 9 I 1
s Equus_asinus.JREZ01000139.1                              1283545  3 +   4378816 AA------------A
i Equus_asinus.JREZ01000139.1                            I 9 I 1
s Equus_caballus.CM000403.2                               18531366  3 -  39960074 AA------------A
i Equus_caballus.CM000403.2                              I 9 I 1
s Equus_przewalskii.KK951119.1                               33394  3 +    498745 AA------------A
i Equus_przewalskii.KK951119.1                           I 9 I 1
s Erinaceus_europaeus.JH835339.1                           3328243  3 -   7059049 AA------------A
i Erinaceus_europaeus.JH835339.1                         I 9 I 1
s Erythrocebus_patas.Contig38                             21205227  3 -  21539334 aa------------a
i Erythrocebus_patas.Contig38                            I 4 I 1
s Eulemur_albifrons.k141_342033                              13845  3 -     14127 AA------------A
i Eulemur_albifrons.k141_342033                          I 4 I 1
s Eulemur_collaris.k141_377015                                6548  3 -     16928 AA------------A
i Eulemur_collaris.k141_377015                           I 4 I 1
s Eulemur_coronatus.k141_885031                              15572  3 -     25546 AA------------A
i Eulemur_coronatus.k141_885031                          I 4 I 1
s Eulemur_flavifrons.k141_1184614                            12776  3 +     26330 AA------------A
i Eulemur_flavifrons.k141_1184614                        I 4 I 1
s Eulemur_fulvus.k141_544389                                 14011  3 +     23973 AA------------A
i Eulemur_fulvus.k141_544389                             I 4 I 1
s Eulemur_macaco.k141_1562045                                12773  3 +     75513 AA------------A
i Eulemur_macaco.k141_1562045                            I 4 I 1
s Eulemur_mongoz.k141_232305                                 10703  3 +     97555 AA------------A
i Eulemur_mongoz.k141_232305                             I 4 I 1
s Eulemur_rubriventer.k141_774594                              194  3 +     13026 AA------------A
i Eulemur_rubriventer.k141_774594                        I 4 I 1
s Eulemur_rufus.k141_1476633                                  4247  3 -     17153 AA------------A
i Eulemur_rufus.k141_1476633                             I 4 I 1
s Eulemur_sanfordi.k141_1122526                              13820  3 +    111500 AA------------A
i Eulemur_sanfordi.k141_1122526                          I 4 I 1
s Felis_catus.CM001381.2                                  20236972  3 + 206538554 AA------------A
i Felis_catus.CM001381.2                                 I 9 I 1
s Felis_catus_fca126.CM031415.1                           20195815  3 + 205367284 AA------------A
i Felis_catus_fca126.CM031415.1                          I 9 I 1
s Felis_nigripes.FelNig_flattened_line_20823                  9559  3 -     36744 AA------------A
i Felis_nigripes.FelNig_flattened_line_20823             I 9 I 1
s Galago_moholi.ctg2040                                     426673  3 -    453645 AA------------A
i Galago_moholi.ctg2040                                  I 4 I 1
s Galago_senegalensis.k141_631886                             4364  3 +     11339 AA------------A
i Galago_senegalensis.k141_631886                        I 4 I 1
s Galagoides_demidoff.k141_1711393                            1677  3 +     41679 AA------------A
i Galagoides_demidoff.k141_1711393                       I 4 I 1
s Galeopterus_variegatus.GalVar_scaffold_108840               1223  3 -      9135 aa------------a
i Galeopterus_variegatus.GalVar_scaffold_108840          I 4 I 1
s Gorilla_beringei.k141_3596273                              16010  3 -     32273 aa------------a
i Gorilla_beringei.k141_3596273                          I 4 I 1
s Gorilla_gorilla.LT578341.1                             186338156  3 + 186649187 aa------------a
i Gorilla_gorilla.LT578341.1                             I 4 I 1
s Hapalemur_alaotrensis.k141_170648                           6884  3 -     19426 AA------------A
i Hapalemur_alaotrensis.k141_170648                      I 4 I 1
s Hapalemur_gilberti.k141_488810                             12033  3 -     15286 AA------------A
i Hapalemur_gilberti.k141_488810                         I 4 I 1
s Hapalemur_griseus.k141_1511508                             13672  3 +     18253 AA------------A
i Hapalemur_griseus.k141_1511508                         I 4 I 1
s Hapalemur_meridionalis.k141_248335                         13773  3 -     41752 AA------------A
i Hapalemur_meridionalis.k141_248335                     I 4 I 1
s Hapalemur_occidentalis.k141_907772                         13610  3 -     16460 AA------------A
i Hapalemur_occidentalis.k141_907772                     I 4 I 1
s Helogale_parvula.HelPar_flattened_line_2585               242325  3 +    327341 AA------------A
i Helogale_parvula.HelPar_flattened_line_2585            I 9 I 1
s Heterohyrax_brucei.HetBruBak_scaffold_122365                 901  3 +      7595 AA------------A
i Heterohyrax_brucei.HetBruBak_scaffold_122365           I 9 I 1
s Hoolock_leuconedys.ctg274                                    434822  3 +    630532 aa------------a
i Hoolock_leuconedys.ctg274                                 I 4 I 1
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45019  3 +     55795 AA------------A
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 9 I 1
s Indri_indri.k141_3655594                                   22563  3 +     31101 AA------------A
i Indri_indri.k141_3655594                               I 4 I 1
s Lasiurus_borealis.LasBor_scaffold_32767                    14135  3 -     42476 CA------------A
i Lasiurus_borealis.LasBor_scaffold_32767                I 9 I 1
s Lemur_catta.scaffold_24                                 15524125  3 -  30322482 AA------------A
i Lemur_catta.scaffold_24                                I 4 I 1
s Leontocebus_fuscicollis.k141_1820339                        7488  3 +     64341 aa------------a
i Leontocebus_fuscicollis.k141_1820339                   I 4 I 1
s Leontocebus_illigeri.k141_3350179                           4811  3 +      4941 AA------------A
i Leontocebus_illigeri.k141_3350179                      I 4 I 1
s Leontocebus_nigricollis.k141_4610752                        7529  3 +     35603 aa------------a
i Leontocebus_nigricollis.k141_4610752                   I 4 I 1
s Leontopithecus_chrysomelas.k141_1519602                    28990  3 +     38576 aa------------a
i Leontopithecus_chrysomelas.k141_1519602                I 4 I 1
s Leontopithecus_rosalia.k141_464620                         25687  3 +     66356 aa------------a
i Leontopithecus_rosalia.k141_464620                     I 4 I 1
s Lepilemur_ankaranensis.k141_596936                         11019  3 -     23766 AA------------A
i Lepilemur_ankaranensis.k141_596936                     I 4 I 1
s Lepilemur_dorsalis.k141_577674                             29080  3 +     45836 AA------------A
i Lepilemur_dorsalis.k141_577674                         I 4 I 1
s Lepilemur_ruficaudatus.k141_121139                          1620  3 +     25010 AA------------A
i Lepilemur_ruficaudatus.k141_121139                     I 4 I 1
s Lepilemur_septentrionalis.k141_185316                      27016  3 +     54090 AA------------A
i Lepilemur_septentrionalis.k141_185316                  I 4 I 1
s Leptonychotes_weddellii.KB714746.1                       3042847  3 +   3914936 AA------------A
i Leptonychotes_weddellii.KB714746.1                     I 9 I 1
s Lepus_americanus.LepAme_scaffold_107385                     6495  3 -     14121 aa------------g
i Lepus_americanus.LepAme_scaffold_107385                I 4 I 1
s Lophocebus_aterrimus.ctg367                              1437176  3 +   1826925 aa------------a
i Lophocebus_aterrimus.ctg367                            I 4 I 1
s Loris_lydekkerianus.k141_2539221                            5921  3 +     11245 AA------------A
i Loris_lydekkerianus.k141_2539221                       I 4 I 1
s Loris_tardigradus.ctg83                                  1004741  3 +   6120653 AA------------A
i Loris_tardigradus.ctg83                                I 4 I 1
s Loxodonta_africana.GL010049.1                            4217329  3 -  43346337 AA------------A
i Loxodonta_africana.GL010049.1                          I 9 I 1
s Lycaon_pictus.CM007581.1                                17955119  3 -  59628241 AA------------A
i Lycaon_pictus.CM007581.1                               I 9 I 1
s Macaca_arctoides.k141_2326796                               6986  3 +     40492 AA------------A
i Macaca_arctoides.k141_2326796                          I 4 I 1
s Macaca_assamensis.Contig5                               59676245  3 +  60120075 AA------------A
i Macaca_assamensis.Contig5                              I 4 I 1
s Macaca_cyclopis.k119_18836                                 12758  3 -     26193 aa------------a
i Macaca_cyclopis.k119_18836                             I 4 I 1
s Macaca_fascicularis.k141_814140                            80542  3 -    114318 aa------------a
i Macaca_fascicularis.k141_814140                        I 4 I 1
s Macaca_fuscata.k119_255327                                  6233  3 -     23192 aa------------a
i Macaca_fuscata.k119_255327                             I 4 I 1
s Macaca_leonina.k141_3550399                                15702  3 -     29190 aa------------a
i Macaca_leonina.k141_3550399                            I 4 I 1
s Macaca_maura.k141_2733130                                  24267  3 +     37952 AA------------A
i Macaca_maura.k141_2733130                              I 4 I 1
s Macaca_mulatta.NC_041758.1                             186839356  3 + 187317192 aa------------a
i Macaca_mulatta.NC_041758.1                             I 4 I 1
s Macaca_nemestrina.KQ007038.1                            25457919  3 -  25927173 aa------------a
i Macaca_nemestrina.KQ007038.1                           I 4 I 1
s Macaca_nigra.k141_1655396                                  80115  3 +     89720 AA------------A
i Macaca_nigra.k141_1655396                              I 4 I 1
s Macaca_radiata.k141_3680011                                 7116  3 +     20474 AA------------A
i Macaca_radiata.k141_3680011                            I 4 I 1
s Macaca_siberu.k141_635500                                   6916  3 -     14993 aa------------a
i Macaca_siberu.k141_635500                              I 4 I 1
s Macaca_silenus.Contig273                                  329782  3 -    668171 aa------------a
i Macaca_silenus.Contig273                               I 4 I 1
s Macaca_thibetana.k99_256239                                 5232  3 -     24072 aa------------a
i Macaca_thibetana.k99_256239                            I 4 I 1
s Macaca_tonkeana.k141_1498238                               25854  3 -     45290 aa------------a
i Macaca_tonkeana.k141_1498238                           I 4 I 1
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90619  3 +     94391 AA------------A
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 13 I 1
s Mandrillus_leucophaeus.scaffold280                      23937449  3 -  24302211 aa------------a
i Mandrillus_leucophaeus.scaffold280                     I 4 I 1
s Mandrillus_sphinx.Contig270                               351577  3 +    752769 aa------------a
i Mandrillus_sphinx.Contig270                            I 4 I 1
s Manis_javanica.JSZB01003497.1                              18497  3 +    737560 AA------------A
i Manis_javanica.JSZB01003497.1                          I 9 I 1
s Manis_pentadactyla.KN006162.1                              50486  3 -    317179 AA------------A
i Manis_pentadactyla.KN006162.1                          I 9 I 1
s Megaderma_lyra.MegLyr_scaffold_4542                        10338  3 -    207569 AA------------A
i Megaderma_lyra.MegLyr_scaffold_4542                    I 15 I 1
s Mellivora_capensis.MelCap_flattened_line_69365             10047  3 +     13704 AA------------A
i Mellivora_capensis.MelCap_flattened_line_69365         I 9 I 1
s Mico_argentatus.k141_1239457                                5766  3 -      7380 aa------------a
i Mico_argentatus.k141_1239457                           I 4 I 1
s Mico_humeralifer.k141_1976199                               4839  3 +     18990 aa------------a
i Mico_humeralifer.k141_1976199                          I 4 I 1
s Mico_schneideri.k141_1950671                                      5778  3 -      7356 aa------------a
i Mico_schneideri.k141_1950671                                 I 4 I 1
s Microcebus_murinus.CM007674.1                           18291545  3 -  93316391 aa------------a
i Microcebus_murinus.CM007674.1                          I 4 I 1
s Microgale_talazaci.MicTal_scaffold_6613                    22147  3 -    145209 AA------------A
i Microgale_talazaci.MicTal_scaffold_6613                I 9 I 1
s Micronycteris_hirsuta.MicHir_scaffold_52381                15653  3 -     19307 AA------------A
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 8 I 1
s Miniopterus_natalensis.LDJU01000034.1                    1850620  3 +   8254450 AA------------A
i Miniopterus_natalensis.LDJU01000034.1                  I 9 I 1
s Miniopterus_schreibersii.MinSch_scaffold_18080             34301  3 +     64694 AA------------A
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 9 I 1
s Miopithecus_ogouensis.k141_534055                           9174  3 -     28506 aa------------a
i Miopithecus_ogouensis.k141_534055                      I 4 I 1
s Mirounga_angustirostris.MirAng_flattened_line_93702         5715  3 -      8324 AA------------A
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 9 I 1
s Mirza_zaza.k141_952172                                      9090  3 -     37649 AA------------A
i Mirza_zaza.k141_952172                                 I 4 I 1
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141619  3 -    366855 AA------------A
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 9 I 1
s Mungos_mungo.MunMun_flattened_line_23663                   35424  3 +     37127 AA------------A
i Mungos_mungo.MunMun_flattened_line_23663               I 9 I 1
s Murina_feae.MurFea_scaffold_85699                           6816  3 +     14753 CA------------A
i Murina_feae.MurFea_scaffold_85699                      I 9 I 1
s Mustela_putorius.JH418006.1                               301238  3 -  14710649 AA------------A
i Mustela_putorius.JH418006.1                            I 9 I 1
s Myotis_brandtii.KE162005.1                                280459  3 -  10118263 CA------------A
i Myotis_brandtii.KE162005.1                             I 9 I 1
s Myotis_lucifugus.GL429869.1                              3903813  3 -   4330536 CA------------A
i Myotis_lucifugus.GL429869.1                            I 9 I 1
s Myotis_myotis.MyoMyo_scaffold_482318                         487  3 -       721 CA------------A
i Myotis_myotis.MyoMyo_scaffold_482318                   I 9 I 1
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189262  3 +    196477 AA------------A
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 9 I 1
s Nasalis_larvatus.k141_413338                               15149  3 +     21681 aa------------a
i Nasalis_larvatus.k141_413338                           I 4 I 1
s Neomonachus_schauinslandi.NINY01007730.1                20306969  3 +  31847680 AA------------A
i Neomonachus_schauinslandi.NINY01007730.1               I 9 I 1
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149381  3 -   9404916 AA------------A
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 9 I 1
s Nycticebus_bengalensis.LG01                            102586286  3 - 196305487 AA------------A
i Nycticebus_bengalensis.LG01                            I 4 I 1
s Nycticebus_coucang.k141_1127096                              210  3 +      2075 AA------------A
i Nycticebus_coucang.k141_1127096                        I 4 I 1
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761640  3 + 199412804 AA------------A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 4 I 1
s Ochotona_princeps.JH802162.1                             1363518  3 +   3988456 aa------------c
i Ochotona_princeps.JH802162.1                           I 4 I 1
s Odobenus_rosmarus.KB229312.1                              506654  3 -   2017862 AA------------A
i Odobenus_rosmarus.KB229312.1                           I 9 I 1
s Orycteropus_afer.OryAfe_flattened_line_144387               9847  3 -     18566 AA------------A
i Orycteropus_afer.OryAfe_flattened_line_144387          I 9 I 1
s Oryctolagus_cuniculus.CM000791.1                        67147376  3 + 174332312 aa------------g
i Oryctolagus_cuniculus.CM000791.1                       I 4 I 1
s Otocyon_megalotis.JAEUCK010005147.1                       462349  3 -    559221 AA------------A
i Otocyon_megalotis.JAEUCK010005147.1                    I 9 I 1
s Otolemur_crassicaudatus.k141_222918                         4205  3 +      8798 AA------------A
i Otolemur_crassicaudatus.k141_222918                    I 4 I 1
s Otolemur_garnettii.GL873799.1                             696368  3 -   1103335 AA------------A
i Otolemur_garnettii.GL873799.1                          I 4 I 1
s Pan_paniscus.KQ411613.1                                    44103  3 +     80009 aa------------a
i Pan_paniscus.KQ411613.1                                I 4 I 1
s Pan_troglodytes.NBAG03001836.1                             30028  3 +     51860 aa------------a
i Pan_troglodytes.NBAG03001836.1                         I 16 I 1
s Panthera_onca.PanOnc_flattened_line_3271                  151174  3 +    230217 AA------------A
i Panthera_onca.PanOnc_flattened_line_3271               I 9 I 1
s Panthera_pardus.KV860321.1                                264383  3 +  18783137 AA------------A
i Panthera_pardus.KV860321.1                             I 9 I 1
s Panthera_tigris.KE722367.1                               4721262  3 -   8748460 AA------------A
i Panthera_tigris.KE722367.1                             I 9 I 1
s Papio_anubis.CM001495.2                                183443199  3 + 183742232 aa------------a
i Papio_anubis.CM001495.2                                I 4 I 1
s Papio_cynocephalus.k141_4307930                             6897  3 +     20448 aa------------a
i Papio_cynocephalus.k141_4307930                        I 4 I 1
s Papio_hamadryas.Contig39                                20563705  3 +  20919399 aa------------a
i Papio_hamadryas.Contig39                               I 4 I 1
s Papio_kindae.k141_1936966                                   5641  3 +     41871 aa------------a
i Papio_kindae.k141_1936966                              I 4 I 1
s Papio_papio.k141_802527                                     8926  3 +     27711 aa------------a
i Papio_papio.k141_802527                                I 4 I 1
s Papio_ursinus.k141_3428135                                  9007  3 +      9205 aa------------a
i Papio_ursinus.k141_3428135                             I 4 I 1
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12656  3 -     78924 AA------------A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 9 I 1
s Perodicticus_ibeanus.k141_855320                           10175  3 +     13100 AA------------A
i Perodicticus_ibeanus.k141_855320                       I 4 I 1
s Perodicticus_potto.k141_1092580                             8581  3 +     25941 AA------------A
i Perodicticus_potto.k141_1092580                        I 4 I 1
s Piliocolobus_badius.k141_1234363                           43660  3 +     62158 aa------------a
i Piliocolobus_badius.k141_1234363                       I 7 I 1
s Piliocolobus_gordonorum.k141_381342                        38391  3 +     89929 Aa------------a
i Piliocolobus_gordonorum.k141_381342                    I 4 I 1
s Piliocolobus_kirkii.k141_448987                            39807  3 +     51399 Aa------------a
i Piliocolobus_kirkii.k141_448987                        I 4 I 1
s Piliocolobus_tephrosceles.PDMG02000141.1                14296045  3 -  14605196 aa------------a
i Piliocolobus_tephrosceles.PDMG02000141.1               I 4 I 1
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1763  3 +     22620 CA------------A
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 9 I 24
s Pongo_abelii.CM009266.2                                189131145  3 + 189387572 aa------------a
i Pongo_abelii.CM009266.2                                I 4 I 1
s Pongo_pygmaeus.ctg66                                     9570753  3 +   9816681 aa------------a
i Pongo_pygmaeus.ctg66                                   I 4 I 1
s Presbytis_comata.k141_677006                               73329  3 -     81375 aa------------a
i Presbytis_comata.k141_677006                           I 4 I 1
s Presbytis_mitrata.k141_1087752                              5149  3 +     19060 AA------------A
i Presbytis_mitrata.k141_1087752                         I 4 I 1
s Procavia_capensis.ProCapCap_scaffold_85530                 13356  3 -     22811 AA------------A
i Procavia_capensis.ProCapCap_scaffold_85530             I 9 I 1
s Prolemur_simus.MPIZ01000396.1                            2596805  3 -   4620579 AA------------A
i Prolemur_simus.MPIZ01000396.1                          I 4 I 1
s Propithecus_coquerelli.NW_012148875.1                     990786  3 +   2598838 AA------------A
i Propithecus_coquerelli.NW_012148875.1                  I 4 I 1
s Propithecus_coronatus.k141_347390                          29098  3 +     38485 AA------------A
i Propithecus_coronatus.k141_347390                      I 4 I 1
s Propithecus_diadema.k141_58108                              1141  3 -     13098 AA------------A
i Propithecus_diadema.k141_58108                         I 4 I 1
s Propithecus_edwardsi.k141_1176054                          26619  3 +     35766 AA------------A
i Propithecus_edwardsi.k141_1176054                      I 4 I 1
s Propithecus_perrieri.k141_1200571                           4806  3 -     24134 AA------------A
i Propithecus_perrieri.k141_1200571                      I 4 I 1
s Propithecus_tattersalli.k141_790011                        28631  3 -     67325 AA------------A
i Propithecus_tattersalli.k141_790011                    I 4 I 1
s Propithecus_verreauxi.k141_956661                           4854  3 -      6182 AA------------A
i Propithecus_verreauxi.k141_956661                      I 4 I 1
s Pteronotus_parnellii.KE909381.1                            15072  3 -     21811 AA------------A
i Pteronotus_parnellii.KE909381.1                        I 9 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40237  3 +     42204 AA------------A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 9 I 1
s Pteropus_alecto.KB030862.1                              22976787  3 +  28871421 AA------------A
i Pteropus_alecto.KB030862.1                             I 13 I 1
s Pteropus_vampyrus.KN534172.1                                6840  3 -      8028 AA------------A
i Pteropus_vampyrus.KN534172.1                           I 13 I 1
s Puma_concolor.QAVW01001104.1                            20274328  3 -  38429054 AA------------A
i Puma_concolor.QAVW01001104.1                           I 9 I 1
s Pygathrix_cinerea.k141_1153803                             15158  3 -     91421 aa------------a
i Pygathrix_cinerea.k141_1153803                         I 4 I 1
s Pygathrix_nigripes_b.ctg100                                 7609278  3 +   7812017 aa------------a
i Pygathrix_nigripes_b.ctg100                               I 4 I 1
s Pygathrix_nigripes_a.k141_215492                             15130  3 -     72585 aa------------a
i Pygathrix_nigripes_a.k141_215492                         I 4 I 1
s Rhinopithecus_bieti.k119_217274                             6844  3 -     11128 aa------------a
i Rhinopithecus_bieti.k119_217274                        I 4 I 1
s Rhinopithecus_roxellana.NC_044550.1                     91236197  3 - 195417433 aa------------a
i Rhinopithecus_roxellana.NC_044550.1                    I 4 I 1
s Rhinopithecus_strykeri.ctg102                            7671849  3 +   7961872 aa------------a
i Rhinopithecus_strykeri.ctg102                          I 4 I 1
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87808  3 -     96226 AA------------A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 13 I 1
s Saguinus_bicolor.k141_2619299                               8165  3 -      8359 aa------------a
i Saguinus_bicolor.k141_2619299                          I 4 I 1
s Saguinus_imperator.k141_2524406                             2123  3 +      2197 aa------------a
i Saguinus_imperator.k141_2524406                        I 4 I 1
s Saguinus_inustus.k141_699149                               13542  3 +     13640 aa------------a
i Saguinus_inustus.k141_699149                           I 4 I 1
s Saguinus_labiatus.k141_285685                               8411  3 +      8564 aa------------a
i Saguinus_labiatus.k141_285685                          I 4 I 1
s Saguinus_midas.LG03                                    209469261  3 + 209938924 aa------------a
i Saguinus_midas.LG03                                    I 4 I 1
s Saguinus_mystax.k141_374627                                 7967  3 -      9399 aa------------a
i Saguinus_mystax.k141_374627                            I 4 I 1
s Saimiri_boliviensis.NW_024100920.1                     119950879  3 - 121099817 aa------------a
i Saimiri_boliviensis.NW_024100920.1                     I 4 I 1
s Saimiri_cassiquiarensis.k141_2188234                       23335  3 +     46362 aa------------a
i Saimiri_cassiquiarensis.k141_2188234                   I 4 I 1
s Saimiri_macrodon.k141_716185                               23430  3 +     45824 aa------------a
i Saimiri_macrodon.k141_716185                           I 4 I 1
s Saimiri_oerstedii.k141_1487881                             40058  3 -     64574 aa------------a
i Saimiri_oerstedii.k141_1487881                         I 4 I 1
s Saimiri_sciureus.k141_2278166                               3064  3 -     23631 aa------------a
i Saimiri_sciureus.k141_2278166                          I 4 I 1
s Saimiri_ustus.k141_1484609                                 23326  3 -     61129 aa------------a
i Saimiri_ustus.k141_1484609                             I 4 I 1
s Sapajus_apella.ctg103                                    5420649  3 -   5703754 aa------------a
i Sapajus_apella.ctg103                                  I 4 I 1
s Sapajus_macrocephalus.k141_351809                          55690  3 -     80660 aa------------a
i Sapajus_macrocephalus.k141_351809                      I 4 I 1
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153218  3 -    313613 AA------------G
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 9 I 1
s Semnopithecus_entellus.k141_11662                          19669  3 -     19888 AA------------A
i Semnopithecus_entellus.k141_11662                      I 4 I 1
s Semnopithecus_hypoleucos.k141_1615806                      26872  3 +     39453 aa------------a
i Semnopithecus_hypoleucos.k141_1615806                  I 4 I 1
s Semnopithecus_johnii.k141_670120                            7391  3 +     27826 aa------------a
i Semnopithecus_johnii.k141_670120                       I 4 I 1
s Semnopithecus_priam.k141_638794                             6912  3 -     19483 aa------------a
i Semnopithecus_priam.k141_638794                        I 4 I 1
s Semnopithecus_schistaceus.k141_1584426                      6980  3 +      7198 AA------------A
i Semnopithecus_schistaceus.k141_1584426                 I 4 I 1
s Semnopithecus_vetulus.k141_1200928                         15238  3 +     15514 aa------------a
i Semnopithecus_vetulus.k141_1200928                     I 4 I 1
s Solenodon_paradoxus.SolPar_flattened_line_126               3778  3 +   1910179 AA------------A
i Solenodon_paradoxus.SolPar_flattened_line_126          I 9 I 1
s Sorex_araneus.JH798187.1                                13651024  3 -  18376816 GG------------G
i Sorex_araneus.JH798187.1                               I 9 I 1
s Spilogale_gracilis.SpiGra_flattened_line_13525             30738  3 +     97271 AA------------A
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 9 I 1
s Suricata_suricatta.SurSur_flattened_line_6629              18325  3 -    196729 AA------------A
i Suricata_suricatta.SurSur_flattened_line_6629          I 9 I 1
s Sus_scrofa.CM000828.4                                    6810500  3 +  69701581 AA------------A
i Sus_scrofa.CM000828.4                                  I 9 I 1
s Tadarida_brasiliensis.TadBra_scaffold_25820                10801  3 +     41958 AA------------A
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 12 I 1
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72623  3 +    116680 AA------------A
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 9 I 1
s Tapirus_indicus.TapInd_scaffold_9301                      118755  3 -    156842 AA------------A
i Tapirus_indicus.TapInd_scaffold_9301                   I 9 I 1
s Tapirus_terrestris.TapTer_scaffold_755                    387212  3 +    539355 AA------------A
i Tapirus_terrestris.TapTer_scaffold_755                 I 9 I 1
s Tarsius_lariang.k141_2201908                               26525  3 +     70052 aa------------g
i Tarsius_lariang.k141_2201908                           I 104 T 104
s Tarsius_wallacei.k141_254427                                1254  2 -     16117 -a------------g
i Tarsius_wallacei.k141_254427                           C 0 I 1
s Theropithecus_gelada.CM009954.1                        186428569  3 + 186847797 aa------------a
i Theropithecus_gelada.CM009954.1                        I 4 I 1
s Tolypeutes_matacus.TolMat_scaffold_228639                   6406  3 +      8208 AA------------A
i Tolypeutes_matacus.TolMat_scaffold_228639              I 9 I 1
s Tonatia_saurophila.TonSau_scaffold_294                     81194  3 +    610378 AA------------A
i Tonatia_saurophila.TonSau_scaffold_294                 I 10 I 1
s Trachypithecus_auratus.k141_722599                         10963  3 -     20410 aa------------a
i Trachypithecus_auratus.k141_722599                     I 4 I 1
s Trachypithecus_crepusculus.k141_582567                        77  3 -     12674 aa------------a
i Trachypithecus_crepusculus.k141_582567                 I 4 I 1
s Trachypithecus_cristatus.k141_580354                       11064  3 +     19930 aa------------a
i Trachypithecus_cristatus.k141_580354                   I 4 I 1
s Trachypithecus_francoisi.k141_1412647                       7491  3 -     19997 aa------------a
i Trachypithecus_francoisi.k141_1412647                  I 4 I 1
s Trachypithecus_geei.k141_277701                            47615  3 -     60166 aa------------a
i Trachypithecus_geei.k141_277701                        I 4 I 1
s Trachypithecus_germaini.k141_912491                        15086  3 -     27529 aa------------a
i Trachypithecus_germaini.k141_912491                    I 4 I 1
s Trachypithecus_hatinhensis.k141_143409                     15030  3 -     18194 aa------------a
i Trachypithecus_hatinhensis.k141_143409                 I 4 I 1
s Trachypithecus_laotum.k141_907409                           8758  3 -     21137 aa------------a
i Trachypithecus_laotum.k141_907409                      I 4 I 1
s Trachypithecus_leucocephalus.k141_587342                    7461  3 -     10723 aa------------a
i Trachypithecus_leucocephalus.k141_587342               I 4 I 1
s Trachypithecus_melamera.k141_434728                         6617  3 +      9834 aa------------a
i Trachypithecus_melamera.k141_434728                    I 4 I 1
s Trachypithecus_obscurus.k141_190785                        24930  3 +     32220 aa------------a
i Trachypithecus_obscurus.k141_190785                    I 4 I 1
s Trachypithecus_phayrei.ctg124                            5939032  3 +   6242583 aa------------a
i Trachypithecus_phayrei.ctg124                          I 4 I 1
s Trachypithecus_pileatus.k141_2007326                        8284  3 +     20839 aa------------a
i Trachypithecus_pileatus.k141_2007326                   I 4 I 1
s Trichechus_manatus.JH594705.1                            4293255  3 +  10818551 AA------------A
i Trichechus_manatus.JH594705.1                          I 9 I 1
s Uropsilus_gracilis.UroGra_scaffold_12083                   53323  3 -     77625 AA------------G
i Uropsilus_gracilis.UroGra_scaffold_12083               I 9 I 1
s Ursus_maritimus.KK499267.1                               4850443  3 -   5085361 AA------------A
i Ursus_maritimus.KK499267.1                             I 9 I 1
s Varecia_rubra.k141_590885                                  11465  3 +     50397 AA------------A
i Varecia_rubra.k141_590885                              I 4 I 1
s Varecia_variegata.k141_1128296                             11524  3 +     24756 AA------------A
i Varecia_variegata.k141_1128296                         I 4 I 1
s Vicugna_pacos.KN270157.1                                 5371881  3 -   5488506 AA------------A
i Vicugna_pacos.KN270157.1                               I 9 I 1
s Vulpes_lagopus.VulLag_flattened_line_30954                 10794  3 -     43706 AA------------A
i Vulpes_lagopus.VulLag_flattened_line_30954             I 9 I 1
s Zalophus_californianus.ZalCal_flattened_line_17732          5367  3 +     86975 AA------------A
i Zalophus_californianus.ZalCal_flattened_line_17732     I 9 I 1
e Mus_pahari.LT608297.1                                   31355125 13 -  89631738 T
e Mus_spretus.CM004101.1                                  90752527 13 - 130317789 T
e Mus_musculus.chr8                                       87650466 13 - 129401213 T
e Mus_caroli.LT608237.1                                   84361468 13 - 120012414 T
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      14994  0 +     63895 C
e Xerus_inauris.XerIna_scaffold_2302                          1129 38 +    224448 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     9318  0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2155667  0 +   4065304 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              105507 17 +    114563 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spermophilus_dauricus.KZ294078.1                         1953989 38 -   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11982 13 -     12148 T
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570728 13 +  90668790 T
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Psammomys_obesus.NESX01036370.1                            10498 13 -     21651 T
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     28190 14 -     29689 I
e Peromyscus_maniculatus.KI615324.1                       18194880 13 -  18517816 T
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80254 13 +    102263 T
e Ondatra_zibethicus.OndZib_scaffold_46174                   25254 13 +     28053 T
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746916 17 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Nannospalax_galili.KL204047.1                            2034165  0 -   3037898 C
e Myotis_davidii.KB100139.1                                1587718  7 -   6019432 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     71306 17 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5066 31 +     14296 T
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11260586 13 -  27267610 T
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182348 13 -  29670104 T
e Meriones_unguiculatus.MerUng_scaffold_7390                 32854 13 +    140813 T
e Marmota_marmota.CZRN01000018.1                          33103134 38 -  40650429 I
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276898  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Ictidomys_tridecemlineatus.JH393364.1                    7520938 34 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      83173 18 +    135385 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20662284 18 +  22651954 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32727 40 +     78134 T
e Glis_glis.GliGli_scaffold_19807                            31485 39 +     49224 T
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             850496 17 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Ellobius_talpinus.LOJH01081419.1                             538 13 +      8657 T
e Ellobius_lutescens.LOEQ01008920.1                          20407 13 -    110024 T
e Elephantulus_edwardii.JH947257.1                         1097711  4 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    36462 17 +     67921 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35827 17 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    837150  9 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11667673 13 + 224834208 T
e Cricetomys_gambianus.CriGam_scaffold_18520                 50293  0 +     63868 C
e Colobus_guereza.LG01                                   199948999 41 + 200372422 T
e Chinchilla_lanigera.JH722012.1                           1252869 16 +   2543920 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Castor_canadensis.CasCan_scaffold_2074                    137144 10 +    179628 I
e Capromys_pilorides.CapPil_scaffold_65020                    1120 17 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      12671 28 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74597  0 -     89534 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     70906 13 +     87051 T

a score=0.000000
s hg38.chrUn_KI270753v1                                       6876 2 +     62944 a-g
s Acinonyx_jubatus.LLWD01001279.1                           827325 2 -   1699592 T-A
i Acinonyx_jubatus.LLWD01001279.1                        I 1 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510586 2 -  29979442 T-A
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 1 C 0
s Ailurus_fulgens.LNAC01001112.1                             79356 2 -    347723 T-A
i Ailurus_fulgens.LNAC01001112.1                         I 1 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14688 2 -     52922 a-a
i Allenopithecus_nigroviridis.k141_3361533               I 1 I 119
s Allochrocebus_lhoesti.k141_4309873                         14624 2 -     28001 a-a
i Allochrocebus_lhoesti.k141_4309873                     I 1 I 99
s Allochrocebus_preussi.k141_1442296                          5120 2 -     18505 a-a
i Allochrocebus_preussi.k141_1442296                     I 1 I 99
s Allochrocebus_solatus.k141_166128                           5974 2 -     12518 a-a
i Allochrocebus_solatus.k141_166128                      I 1 I 99
s Alouatta_belzebul.k141_3560514                              7452 2 +     51355 a-a
i Alouatta_belzebul.k141_3560514                         I 1 C 0
s Alouatta_caraya.k141_1701091                                 574 2 -     36483 a-a
i Alouatta_caraya.k141_1701091                           I 1 C 0
s Alouatta_discolor.k141_566626                              11082 2 +     28687 a-a
i Alouatta_discolor.k141_566626                          T 26 I 114
s Alouatta_juara.k141_1509701                                24843 2 +     25266 a-a
i Alouatta_juara.k141_1509701                            I 1 C 0
s Alouatta_macconnelli.k141_918386                             568 2 -      9457 a-a
i Alouatta_macconnelli.k141_918386                       I 1 C 0
s Alouatta_nigerrima.k141_3472759                            18146 2 -     18578 a-a
i Alouatta_nigerrima.k141_3472759                        I 1 C 0
s Alouatta_palliata.k141_2135620                              3533 2 +     47717 A-A
i Alouatta_palliata.k141_2135620                         I 1 I 178
s Alouatta_puruensis.k141_362188                               242 2 +      5663 a-a
i Alouatta_puruensis.k141_362188                         I 1 C 0
s Alouatta_seniculus.k141_117119                             14862 2 +     50774 A-A
i Alouatta_seniculus.k141_117119                         I 1 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185351 2 +    412891 T-A
i Anoura_caudifer.AnoCau_scaffold_1412                   I 1 C 0
s Aotus_azarae.k141_3104676                                  15475 2 -     33861 a-a
i Aotus_azarae.k141_3104676                              I 1 I 200
s Aotus_griseimembra.k141_2240599                            15495 2 -     34016 a-a
i Aotus_griseimembra.k141_2240599                        I 1 I 216
s Aotus_nancymaae.KZ198451.1                               4297892 2 -   5030052 a-a
i Aotus_nancymaae.KZ198451.1                             I 1 I 208
s Aotus_trivirgatus.k141_2152450                             15497 2 -     34685 a-a
i Aotus_trivirgatus.k141_2152450                         I 1 I 212
s Aotus_vociferans.k141_344750                               28621 2 -     47192 a-a
i Aotus_vociferans.k141_344750                           I 1 I 212
s Arctocebus_calabarensis.k141_2318572                       11543 2 +     14667 A-A
i Arctocebus_calabarensis.k141_2318572                   I 1 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4760 2 +     43469 T-A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 1 C 0
s Avahi_laniger.k141_765380                                  53746 2 -     92717 A-A
i Avahi_laniger.k141_765380                              I 1 I 1
s Avahi_peyrierasi.k141_1424874                              54373 2 +     85213 A-A
i Avahi_peyrierasi.k141_1424874                          I 1 I 1
s Callibella_humilis.k141_1278103                             5230 2 -     10423 a-a
i Callibella_humilis.k141_1278103                        I 1 I 257
s Callimico_goeldii.k141_1091182                             24700 2 +     31915 a-a
i Callimico_goeldii.k141_1091182                         I 1 I 255
s Callithrix_geoffroyi.k119_512088                            5196 2 +      5267 a-a
i Callithrix_geoffroyi.k119_512088                       I 1 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590410 2 - 189096842 a-a
i Callithrix_jacchus.pat_scaffold_3                      I 1 I 231
s Callithrix_kuhlii.k119_1164682                             11941 2 -     12001 A-A
i Callithrix_kuhlii.k119_1164682                         I 1 C 0
s Camelus_bactrianus.KN276810.1                           10002382 2 -  17673402 T-A
i Camelus_bactrianus.KN276810.1                          I 1 C 0
s Camelus_dromedarius.KN272107.1                           2334840 2 -   7040546 T-A
i Camelus_dromedarius.KN272107.1                         I 1 C 0
s Camelus_ferus.KB017975.1                                  403123 2 -   1652518 T-A
i Camelus_ferus.KB017975.1                               I 1 C 0
s CanFam4.chr16                                           17799175 2 -  60362399 T-A
i CanFam4.chr16                                          I 1 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    185232 2 -    185531 T-A
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 1 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034618 2 -   9314153 T-A
i Canis_lupus_dingo.QKWQ01000480.1                       I 1 C 0
s Canis_lupus_familiaris.chr16                            17958883 2 -  59632846 T-A
i Canis_lupus_familiaris.chr16                           I 1 C 0
s Canis_lupus_orion.HG994398.1                            18500395 2 +  63665305 T-A
i Canis_lupus_orion.HG994398.1                           I 1 C 0
s Carlito_syrichta.NW_007247396.1                           201417 2 +    308752 a-a
i Carlito_syrichta.NW_007247396.1                        I 1 I 1
s Carollia_perspicillata.CarPer_scaffold_92756                5118 2 -     11696 T-A
i Carollia_perspicillata.CarPer_scaffold_92756           I 1 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     93012 2 +    217609 C-A
i Catagonus_wagneri.CatWag_scaffold_2839                 I 1 C 0
s Cebuella_niveiventris.k141_1251222                          9855 2 -     11392 a-a
i Cebuella_niveiventris.k141_1251222                     I 1 I 267
s Cebuella_pygmaea.k141_1309012                               5953 2 -      7577 a-a
i Cebuella_pygmaea.k141_1309012                          I 1 I 237
s Cebus_albifrons.Contig27                                25651982 2 +  26074798 a-a
i Cebus_albifrons.Contig27                               I 1 I 433
s Cebus_olivaceus.k141_398305                                 1558 2 +      1777 A-A
i Cebus_olivaceus.k141_398305                            I 1 C 0
s Cebus_unicolor.k141_544048                                 49895 2 -     74725 a-a
i Cebus_unicolor.k141_544048                             I 1 C 0
s Cephalopachus_bancanus.k141_1423433                         5422 2 +     31688 a-a
i Cephalopachus_bancanus.k141_1423433                    I 1 I 115
s Ceratotherium_simum.JH767749.1                          12231440 2 +  27778364 T-A
i Ceratotherium_simum.JH767749.1                         I 1 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2467 2 -     25243 T-A
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 1 C 0
s Cercocebus_atys.KQ010504.1                               4475633 2 +   4669795 a-a
i Cercocebus_atys.KQ010504.1                             I 1 I 99
s Cercocebus_chrysogaster.k141_393940                        14178 2 -     19203 a-a
i Cercocebus_chrysogaster.k141_393940                    I 1 I 4
s Cercocebus_lunulatus.k141_3342297                            794 2 -     14043 a-a
i Cercocebus_lunulatus.k141_3342297                      I 1 I 99
s Cercocebus_torquatus.k141_3057011                           8830 2 +     27781 a-a
i Cercocebus_torquatus.k141_3057011                      I 1 I 96
s Cercopithecus_ascanius.k141_1024104                         8995 2 -     20310 a-a
i Cercopithecus_ascanius.k141_1024104                    I 1 I 99
s Cercopithecus_cephus.k141_1078548                          11974 2 +     29689 a-a
i Cercopithecus_cephus.k141_1078548                      I 1 I 100
s Cercopithecus_diana.k141_1150327                            6728 2 -     20078 a-a
i Cercopithecus_diana.k141_1150327                       I 1 I 99
s Cercopithecus_hamlyni.k141_187466                          14651 2 -     27936 a-a
i Cercopithecus_hamlyni.k141_187466                      I 1 I 99
s Cercopithecus_lowei.k141_1854285                            3515 2 -     17152 a-a
i Cercopithecus_lowei.k141_1854285                       I 1 I 99
s Cercopithecus_albogularis.ctg5                                38817054 2 +  39242232 a-a
i Cercopithecus_albogularis.ctg5                               I 1 I 99
s Cercopithecus_mona.ctg39                                21222746 2 -  21565898 a-a
i Cercopithecus_mona.ctg39                               I 1 I 99
s Cercopithecus_neglectus.k141_2526306                       39864 2 -     53127 a-a
i Cercopithecus_neglectus.k141_2526306                   I 1 I 99
s Cercopithecus_nictitans.k141_1119848                         115 2 +     27489 a-a
i Cercopithecus_nictitans.k141_1119848                   I 1 n 1
s Cercopithecus_petaurista.k141_807961                       14664 2 -     27947 a-a
i Cercopithecus_petaurista.k141_807961                   I 1 I 99
s Cercopithecus_pogonias.k141_822820                         14640 2 +     17596 a-a
i Cercopithecus_pogonias.k141_822820                     I 1 I 99
s Cercopithecus_roloway.k141_2581234                           687 2 +     14005 a-a
i Cercopithecus_roloway.k141_2581234                     I 1 I 99
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             537 2 -      8501 T-A
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       I 1 C 0
s Cheirogaleus_major.k141_333249                             21127 2 -     52598 A-A
i Cheirogaleus_major.k141_333249                         I 1 I 1
s Cheirogaleus_medius.k141_1055463                           16492 2 +     57038 A-A
i Cheirogaleus_medius.k141_1055463                       I 1 I 1
s Chiropotes_albinasus.k141_2206961                            157 2 -     15524 a-a
i Chiropotes_albinasus.k141_2206961                      T 137 I 227
s Chlorocebus_aethiops.ctg25                              18428624 2 -  18827391 a-a
i Chlorocebus_aethiops.ctg25                             I 1 I 99
s Chlorocebus_pygerythrus.k141_1025673                       15061 2 -     50209 a-a
i Chlorocebus_pygerythrus.k141_1025673                   I 1 I 99
s Chlorocebus_sabaeus.CM001947.1                         135422061 2 + 135778131 a-a
i Chlorocebus_sabaeus.CM001947.1                         I 1 I 99
s Choloepus_didactylus.ChoDid_scaffold_45914                 18315 2 +     19366 T-A
i Choloepus_didactylus.ChoDid_scaffold_45914             I 1 C 0
s Choloepus_hoffmanni.KN194906.1                            173391 2 +    839153 T-A
i Choloepus_hoffmanni.KN194906.1                         I 1 C 0
s Colobus_angolensis.KN981557.1                            1910566 2 +   2368649 a-a
i Colobus_angolensis.KN981557.1                          I 1 I 103
s Colobus_polykomos.k141_906115                              37203 2 +     84244 a-g
i Colobus_polykomos.k141_906115                          I 100 C 0
s Condylura_cristata.JH655891.1                           17548107 2 -  53390261 T-A
i Condylura_cristata.JH655891.1                          I 1 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14407 2 -     20389 T-A
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 1 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               2998 2 -     19598 T-A
i Crocidura_indochinensis.CroInd_scaffold_37019          I 1 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28496 2 -     87169 T-A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 1 C 0
s Dasypus_novemcinctus.JH564415.1                            63544 2 +   2246927 T-A
i Dasypus_novemcinctus.JH564415.1                        I 1 C 0
s Daubentonia_madagascariensis.ctg71                      12537344 2 -  12879189 A-A
i Daubentonia_madagascariensis.ctg71                     I 1 C 0
s Desmodus_rotundus.KZ672289.1                             8630131 2 +  20541912 T-A
i Desmodus_rotundus.KZ672289.1                           I 1 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673291 2 +   1390856 T-A
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 1 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6043 2 +    198055 T-A
i Diceros_bicornis.DicBicMic_scaffold_5955               I 1 C 0
s Echinops_telfairi.JH980293.1                            48780404 2 + 111700974 T-A
i Echinops_telfairi.JH980293.1                           I 1 C 0
s Eidolon_helvum.KE759718.1                                  10532 2 +     11740 T-A
i Eidolon_helvum.KE759718.1                              I 1 C 0
s Enhydra_lutris.KZ291758.1                               16329314 2 -  41312741 A-A
i Enhydra_lutris.KZ291758.1                              I 1 C 0
s Eptesicus_fuscus.JH977646.1                              2145723 2 -  14770903 T-A
i Eptesicus_fuscus.JH977646.1                            I 1 C 0
s Equus_asinus.JREZ01000139.1                              1283549 2 +   4378816 T-A
i Equus_asinus.JREZ01000139.1                            I 1 C 0
s Equus_caballus.CM000403.2                               18531370 2 -  39960074 T-A
i Equus_caballus.CM000403.2                              I 1 C 0
s Equus_przewalskii.KK951119.1                               33398 2 +    498745 T-A
i Equus_przewalskii.KK951119.1                           I 1 C 0
s Erinaceus_europaeus.JH835339.1                           3328247 2 -   7059049 T-A
i Erinaceus_europaeus.JH835339.1                         I 1 C 0
s Erythrocebus_patas.Contig38                             21205231 2 -  21539334 a-a
i Erythrocebus_patas.Contig38                            I 1 I 99
s Eulemur_albifrons.k141_342033                              13849 2 -     14127 A-A
i Eulemur_albifrons.k141_342033                          I 1 I 1
s Eulemur_collaris.k141_377015                                6552 2 -     16928 A-A
i Eulemur_collaris.k141_377015                           I 1 I 1
s Eulemur_coronatus.k141_885031                              15576 2 -     25546 A-A
i Eulemur_coronatus.k141_885031                          I 1 I 1
s Eulemur_flavifrons.k141_1184614                            12780 2 +     26330 A-A
i Eulemur_flavifrons.k141_1184614                        I 1 I 1
s Eulemur_fulvus.k141_544389                                 14015 2 +     23973 A-A
i Eulemur_fulvus.k141_544389                             I 1 I 1
s Eulemur_macaco.k141_1562045                                12777 2 +     75513 A-A
i Eulemur_macaco.k141_1562045                            I 1 I 1
s Eulemur_mongoz.k141_232305                                 10707 2 +     97555 A-A
i Eulemur_mongoz.k141_232305                             I 1 I 1
s Eulemur_rubriventer.k141_774594                              198 2 +     13026 A-A
i Eulemur_rubriventer.k141_774594                        I 1 I 1
s Eulemur_rufus.k141_1476633                                  4251 2 -     17153 A-A
i Eulemur_rufus.k141_1476633                             I 1 I 1
s Eulemur_sanfordi.k141_1122526                              13824 2 +    111500 A-A
i Eulemur_sanfordi.k141_1122526                          I 1 I 1
s Felis_catus.CM001381.2                                  20236976 2 + 206538554 T-A
i Felis_catus.CM001381.2                                 I 1 C 0
s Felis_catus_fca126.CM031415.1                           20195819 2 + 205367284 T-A
i Felis_catus_fca126.CM031415.1                          I 1 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  9563 2 -     36744 T-A
i Felis_nigripes.FelNig_flattened_line_20823             I 1 C 0
s Galago_moholi.ctg2040                                     426677 2 -    453645 A-A
i Galago_moholi.ctg2040                                  I 1 C 0
s Galago_senegalensis.k141_631886                             4368 2 +     11339 A-A
i Galago_senegalensis.k141_631886                        I 1 C 0
s Galagoides_demidoff.k141_1711393                            1681 2 +     41679 A-A
i Galagoides_demidoff.k141_1711393                       I 1 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1227 3 -      9135 aga
i Galeopterus_variegatus.GalVar_scaffold_108840          I 1 C 0
s Gorilla_beringei.k141_3596273                              16014 2 -     32273 a-a
i Gorilla_beringei.k141_3596273                          I 1 I 117
s Gorilla_gorilla.LT578341.1                             186338160 2 + 186649187 a-a
i Gorilla_gorilla.LT578341.1                             I 1 I 108
s Hapalemur_alaotrensis.k141_170648                           6888 2 -     19426 A-A
i Hapalemur_alaotrensis.k141_170648                      I 1 I 1
s Hapalemur_gilberti.k141_488810                             12037 2 -     15286 A-A
i Hapalemur_gilberti.k141_488810                         I 1 I 1
s Hapalemur_griseus.k141_1511508                             13676 2 +     18253 A-A
i Hapalemur_griseus.k141_1511508                         I 1 I 1
s Hapalemur_meridionalis.k141_248335                         13777 2 -     41752 A-A
i Hapalemur_meridionalis.k141_248335                     I 1 I 1
s Hapalemur_occidentalis.k141_907772                         13614 2 -     16460 A-A
i Hapalemur_occidentalis.k141_907772                     I 1 I 1
s Helogale_parvula.HelPar_flattened_line_2585               242329 2 +    327341 T-A
i Helogale_parvula.HelPar_flattened_line_2585            I 1 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                 905 2 +      7595 T-A
i Heterohyrax_brucei.HetBruBak_scaffold_122365           I 1 C 0
s Hoolock_leuconedys.ctg274                                    434826 2 +    630532 a-a
i Hoolock_leuconedys.ctg274                                 I 1 I 110
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45023 2 +     55795 T-A
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 1 C 0
s Indri_indri.k141_3655594                                   22567 2 +     31101 A-A
i Indri_indri.k141_3655594                               I 1 I 1
s Lasiurus_borealis.LasBor_scaffold_32767                    14139 2 -     42476 T-A
i Lasiurus_borealis.LasBor_scaffold_32767                I 1 I 28
s Lemur_catta.scaffold_24                                 15524129 2 -  30322482 A-A
i Lemur_catta.scaffold_24                                I 1 I 1
s Leontocebus_fuscicollis.k141_1820339                        7492 2 +     64341 a-a
i Leontocebus_fuscicollis.k141_1820339                   I 1 I 270
s Leontocebus_illigeri.k141_3350179                           4815 2 +      4941 A-A
i Leontocebus_illigeri.k141_3350179                      I 1 I 4
s Leontocebus_nigricollis.k141_4610752                        7533 2 +     35603 a-a
i Leontocebus_nigricollis.k141_4610752                   I 1 I 257
s Leontopithecus_chrysomelas.k141_1519602                    28994 2 +     38576 a-a
i Leontopithecus_chrysomelas.k141_1519602                I 1 I 216
s Leontopithecus_rosalia.k141_464620                         25691 2 +     66356 a-a
i Leontopithecus_rosalia.k141_464620                     I 1 I 219
s Lepilemur_ankaranensis.k141_596936                         11023 2 -     23766 A-A
i Lepilemur_ankaranensis.k141_596936                     I 1 I 1
s Lepilemur_dorsalis.k141_577674                             29084 2 +     45836 A-A
i Lepilemur_dorsalis.k141_577674                         I 1 I 1
s Lepilemur_ruficaudatus.k141_121139                          1624 2 +     25010 A-A
i Lepilemur_ruficaudatus.k141_121139                     I 1 I 1
s Lepilemur_septentrionalis.k141_185316                      27020 2 +     54090 A-A
i Lepilemur_septentrionalis.k141_185316                  I 1 I 1
s Leptonychotes_weddellii.KB714746.1                       3042851 2 +   3914936 T-A
i Leptonychotes_weddellii.KB714746.1                     I 1 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6499 1 -     14121 --a
i Lepus_americanus.LepAme_scaffold_107385                I 1 C 0
s Lophocebus_aterrimus.ctg367                              1437180 2 +   1826925 a-a
i Lophocebus_aterrimus.ctg367                            I 1 I 97
s Loris_lydekkerianus.k141_2539221                            5925 2 +     11245 A-A
i Loris_lydekkerianus.k141_2539221                       I 1 C 0
s Loris_tardigradus.ctg83                                  1004745 2 +   6120653 A-A
i Loris_tardigradus.ctg83                                I 1 C 0
s Loxodonta_africana.GL010049.1                            4217333 2 -  43346337 T-A
i Loxodonta_africana.GL010049.1                          I 1 C 0
s Lycaon_pictus.CM007581.1                                17955123 2 -  59628241 T-A
i Lycaon_pictus.CM007581.1                               I 1 C 0
s Macaca_arctoides.k141_2326796                               6990 2 +     40492 A-A
i Macaca_arctoides.k141_2326796                          I 1 C 0
s Macaca_assamensis.Contig5                               59676249 2 +  60120075 A-A
i Macaca_assamensis.Contig5                              I 1 C 0
s Macaca_cyclopis.k119_18836                                 12762 2 -     26193 a-a
i Macaca_cyclopis.k119_18836                             I 1 C 0
s Macaca_fascicularis.k141_814140                            80546 2 -    114318 a-a
i Macaca_fascicularis.k141_814140                        I 1 C 0
s Macaca_fuscata.k119_255327                                  6237 2 -     23192 a-a
i Macaca_fuscata.k119_255327                             I 1 C 0
s Macaca_leonina.k141_3550399                                15706 2 -     29190 a-a
i Macaca_leonina.k141_3550399                            I 1 C 0
s Macaca_maura.k141_2733130                                  24271 2 +     37952 A-A
i Macaca_maura.k141_2733130                              I 1 C 0
s Macaca_mulatta.NC_041758.1                             186839360 2 + 187317192 a-a
i Macaca_mulatta.NC_041758.1                             I 1 C 0
s Macaca_nemestrina.KQ007038.1                            25457923 2 -  25927173 a-a
i Macaca_nemestrina.KQ007038.1                           I 1 C 0
s Macaca_nigra.k141_1655396                                  80119 2 +     89720 A-A
i Macaca_nigra.k141_1655396                              I 1 C 0
s Macaca_radiata.k141_3680011                                 7120 2 +     20474 A-A
i Macaca_radiata.k141_3680011                            I 1 C 0
s Macaca_siberu.k141_635500                                   6920 2 -     14993 a-a
i Macaca_siberu.k141_635500                              I 1 C 0
s Macaca_silenus.Contig273                                  329786 2 -    668171 a-a
i Macaca_silenus.Contig273                               I 1 C 0
s Macaca_thibetana.k99_256239                                 5236 2 -     24072 a-a
i Macaca_thibetana.k99_256239                            I 1 C 0
s Macaca_tonkeana.k141_1498238                               25858 2 -     45290 a-a
i Macaca_tonkeana.k141_1498238                           I 1 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90623 2 +     94391 T-A
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 1 C 0
s Mandrillus_leucophaeus.scaffold280                      23937453 2 -  24302211 a-a
i Mandrillus_leucophaeus.scaffold280                     I 1 I 99
s Mandrillus_sphinx.Contig270                               351581 2 +    752769 a-a
i Mandrillus_sphinx.Contig270                            I 1 I 95
s Manis_javanica.JSZB01003497.1                              18501 2 +    737560 T-A
i Manis_javanica.JSZB01003497.1                          I 1 I 3
s Manis_pentadactyla.KN006162.1                              50490 2 -    317179 T-A
i Manis_pentadactyla.KN006162.1                          I 1 I 3
s Megaderma_lyra.MegLyr_scaffold_4542                        10342 2 -    207569 A-T
i Megaderma_lyra.MegLyr_scaffold_4542                    I 1 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10051 2 +     13704 A-A
i Mellivora_capensis.MelCap_flattened_line_69365         I 1 C 0
s Mico_argentatus.k141_1239457                                5770 2 -      7380 a-a
i Mico_argentatus.k141_1239457                           I 1 I 231
s Mico_humeralifer.k141_1976199                               4843 2 +     18990 a-a
i Mico_humeralifer.k141_1976199                          I 1 I 4
s Mico_schneideri.k141_1950671                                      5782 2 -      7356 a-a
i Mico_schneideri.k141_1950671                                 I 1 I 231
s Microcebus_murinus.CM007674.1                           18291549 2 -  93316391 a-a
i Microcebus_murinus.CM007674.1                          I 1 I 1
s Microgale_talazaci.MicTal_scaffold_6613                    22151 2 -    145209 C-A
i Microgale_talazaci.MicTal_scaffold_6613                I 1 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                15657 2 -     19307 G-A
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 1 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850624 2 +   8254450 T-A
i Miniopterus_natalensis.LDJU01000034.1                  I 1 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34305 2 +     64694 T-A
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 1 C 0
s Miopithecus_ogouensis.k141_534055                           9178 2 -     28506 a-a
i Miopithecus_ogouensis.k141_534055                      I 1 I 83
s Mirounga_angustirostris.MirAng_flattened_line_93702         5719 2 -      8324 T-A
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 1 C 0
s Mirza_zaza.k141_952172                                      9094 2 -     37649 A-A
i Mirza_zaza.k141_952172                                 I 1 I 1
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141623 2 -    366855 T-A
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 1 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35428 2 +     37127 T-A
i Mungos_mungo.MunMun_flattened_line_23663               I 1 C 0
s Murina_feae.MurFea_scaffold_85699                           6820 2 +     14753 T-A
i Murina_feae.MurFea_scaffold_85699                      I 1 C 0
s Mustela_putorius.JH418006.1                               301242 2 -  14710649 A-A
i Mustela_putorius.JH418006.1                            I 1 C 0
s Myotis_brandtii.KE162005.1                                280463 2 -  10118263 T-A
i Myotis_brandtii.KE162005.1                             I 1 C 0
s Myotis_davidii.KB100139.1                                1587725 2 -   6019432 T-A
i Myotis_davidii.KB100139.1                              I 7 C 0
s Myotis_lucifugus.GL429869.1                              3903817 2 -   4330536 T-A
i Myotis_lucifugus.GL429869.1                            I 1 C 0
s Myotis_myotis.MyoMyo_scaffold_482318                         491 2 -       721 T-A
i Myotis_myotis.MyoMyo_scaffold_482318                   I 1 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189266 2 +    196477 T-C
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 1 C 0
s Nasalis_larvatus.k141_413338                               15153 2 +     21681 a-a
i Nasalis_larvatus.k141_413338                           I 1 I 107
s Neomonachus_schauinslandi.NINY01007730.1                20306973 2 +  31847680 t-a
i Neomonachus_schauinslandi.NINY01007730.1               I 1 I 225
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149385 2 -   9404916 T-A
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 1 C 0
s Nycticebus_bengalensis.LG01                            102586290 2 - 196305487 T-A
i Nycticebus_bengalensis.LG01                            I 1 C 0
s Nycticebus_coucang.k141_1127096                              214 2 +      2075 T-A
i Nycticebus_coucang.k141_1127096                        I 1 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761644 2 + 199412804 T-A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 1 C 0
s Ochotona_princeps.JH802162.1                             1363522 1 +   3988456 --a
i Ochotona_princeps.JH802162.1                           I 1 C 0
s Odobenus_rosmarus.KB229312.1                              506658 2 -   2017862 T-A
i Odobenus_rosmarus.KB229312.1                           I 1 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9851 2 -     18566 T-A
i Orycteropus_afer.OryAfe_flattened_line_144387          I 1 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147380 1 + 174332312 --a
i Oryctolagus_cuniculus.CM000791.1                       I 1 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462353 2 -    559221 T-A
i Otocyon_megalotis.JAEUCK010005147.1                    I 1 C 0
s Otolemur_crassicaudatus.k141_222918                         4209 2 +      8798 A-A
i Otolemur_crassicaudatus.k141_222918                    I 1 C 0
s Otolemur_garnettii.GL873799.1                             696372 2 -   1103335 A-A
i Otolemur_garnettii.GL873799.1                          I 1 C 0
s Pan_paniscus.KQ411613.1                                    44107 2 +     80009 a-a
i Pan_paniscus.KQ411613.1                                I 1 I 113
s Pan_troglodytes.NBAG03001836.1                             30032 2 +     51860 a-a
i Pan_troglodytes.NBAG03001836.1                         I 1 I 4
s Panthera_onca.PanOnc_flattened_line_3271                  151178 2 +    230217 T-A
i Panthera_onca.PanOnc_flattened_line_3271               I 1 C 0
s Panthera_pardus.KV860321.1                                264387 2 +  18783137 T-A
i Panthera_pardus.KV860321.1                             I 1 C 0
s Panthera_tigris.KE722367.1                               4721266 2 -   8748460 T-A
i Panthera_tigris.KE722367.1                             I 1 C 0
s Papio_anubis.CM001495.2                                183443203 2 + 183742232 a-a
i Papio_anubis.CM001495.2                                I 1 I 151
s Papio_cynocephalus.k141_4307930                             6901 2 +     20448 a-a
i Papio_cynocephalus.k141_4307930                        I 1 I 99
s Papio_hamadryas.Contig39                                20563709 2 +  20919399 a-a
i Papio_hamadryas.Contig39                               I 1 I 103
s Papio_kindae.k141_1936966                                   5645 2 +     41871 a-a
i Papio_kindae.k141_1936966                              I 1 I 99
s Papio_papio.k141_802527                                     8930 2 +     27711 a-a
i Papio_papio.k141_802527                                I 1 I 107
s Papio_ursinus.k141_3428135                                  9011 2 +      9205 a-a
i Papio_ursinus.k141_3428135                             I 1 I 95
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12660 2 -     78924 T-A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 1 C 0
s Perodicticus_ibeanus.k141_855320                           10179 2 +     13100 A-A
i Perodicticus_ibeanus.k141_855320                       I 1 C 0
s Perodicticus_potto.k141_1092580                             8585 2 +     25941 A-A
i Perodicticus_potto.k141_1092580                        I 1 C 0
s Piliocolobus_badius.k141_1234363                           43664 2 +     62158 a-a
i Piliocolobus_badius.k141_1234363                       I 1 I 87
s Piliocolobus_gordonorum.k141_381342                        38395 2 +     89929 a-a
i Piliocolobus_gordonorum.k141_381342                    I 1 I 103
s Piliocolobus_kirkii.k141_448987                            39811 2 +     51399 a-a
i Piliocolobus_kirkii.k141_448987                        I 1 I 103
s Piliocolobus_tephrosceles.PDMG02000141.1                14296049 2 -  14605196 a-a
i Piliocolobus_tephrosceles.PDMG02000141.1               I 1 I 103
s Pongo_abelii.CM009266.2                                189131149 2 + 189387572 a-a
i Pongo_abelii.CM009266.2                                I 1 I 109
s Pongo_pygmaeus.ctg66                                     9570757 2 +   9816681 a-a
i Pongo_pygmaeus.ctg66                                   I 1 I 108
s Presbytis_comata.k141_677006                               73333 2 -     81375 a-a
i Presbytis_comata.k141_677006                           I 1 I 103
s Presbytis_mitrata.k141_1087752                              5153 2 +     19060 A-A
i Presbytis_mitrata.k141_1087752                         I 1 I 103
s Procavia_capensis.ProCapCap_scaffold_85530                 13360 2 -     22811 T-A
i Procavia_capensis.ProCapCap_scaffold_85530             I 1 C 0
s Prolemur_simus.MPIZ01000396.1                            2596809 2 -   4620579 A-a
i Prolemur_simus.MPIZ01000396.1                          I 1 I 1
s Propithecus_coquerelli.NW_012148875.1                     990790 2 +   2598838 A-A
i Propithecus_coquerelli.NW_012148875.1                  I 1 I 1
s Propithecus_coronatus.k141_347390                          29102 2 +     38485 A-A
i Propithecus_coronatus.k141_347390                      I 1 I 1
s Propithecus_diadema.k141_58108                              1145 2 -     13098 A-A
i Propithecus_diadema.k141_58108                         I 1 I 1
s Propithecus_edwardsi.k141_1176054                          26623 2 +     35766 A-A
i Propithecus_edwardsi.k141_1176054                      I 1 I 1
s Propithecus_perrieri.k141_1200571                           4810 2 -     24134 A-A
i Propithecus_perrieri.k141_1200571                      I 1 I 1
s Propithecus_tattersalli.k141_790011                        28635 2 -     67325 A-A
i Propithecus_tattersalli.k141_790011                    I 1 I 1
s Propithecus_verreauxi.k141_956661                           4858 2 -      6182 A-A
i Propithecus_verreauxi.k141_956661                      I 1 I 1
s Pteronotus_parnellii.KE909381.1                            15076 2 -     21811 T-A
i Pteronotus_parnellii.KE909381.1                        I 1 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40241 2 +     42204 A-A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 1 C 0
s Pteropus_alecto.KB030862.1                              22976791 2 +  28871421 T-A
i Pteropus_alecto.KB030862.1                             I 1 C 0
s Pteropus_vampyrus.KN534172.1                                6844 2 -      8028 T-A
i Pteropus_vampyrus.KN534172.1                           I 1 C 0
s Puma_concolor.QAVW01001104.1                            20274332 2 -  38429054 T-A
i Puma_concolor.QAVW01001104.1                           I 1 C 0
s Pygathrix_cinerea.k141_1153803                             15162 2 -     91421 a-a
i Pygathrix_cinerea.k141_1153803                         I 1 I 107
s Pygathrix_nigripes_b.ctg100                                 7609282 2 +   7812017 a-a
i Pygathrix_nigripes_b.ctg100                               I 1 I 107
s Pygathrix_nigripes_a.k141_215492                             15134 2 -     72585 a-a
i Pygathrix_nigripes_a.k141_215492                         I 1 I 107
s Rhinopithecus_bieti.k119_217274                             6848 2 -     11128 a-a
i Rhinopithecus_bieti.k119_217274                        I 1 I 106
s Rhinopithecus_roxellana.NC_044550.1                     91236201 2 - 195417433 a-a
i Rhinopithecus_roxellana.NC_044550.1                    I 1 I 100
s Rhinopithecus_strykeri.ctg102                            7671853 2 +   7961872 a-a
i Rhinopithecus_strykeri.ctg102                          I 1 I 106
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87812 2 -     96226 T-A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 1 C 0
s Saguinus_bicolor.k141_2619299                               8169 2 -      8359 a-a
i Saguinus_bicolor.k141_2619299                          I 1 I 4
s Saguinus_imperator.k141_2524406                             2127 2 +      2197 a-a
i Saguinus_imperator.k141_2524406                        I 1 I 4
s Saguinus_inustus.k141_699149                               13546 2 +     13640 a-a
i Saguinus_inustus.k141_699149                           I 1 I 4
s Saguinus_labiatus.k141_285685                               8415 2 +      8564 a-a
i Saguinus_labiatus.k141_285685                          I 1 C 0
s Saguinus_midas.LG03                                    209469265 2 + 209938924 a-a
i Saguinus_midas.LG03                                    I 1 I 464
s Saguinus_mystax.k141_374627                                 7971 2 -      9399 a-a
i Saguinus_mystax.k141_374627                            I 1 I 393
s Saimiri_boliviensis.NW_024100920.1                     119950883 2 - 121099817 a-a
i Saimiri_boliviensis.NW_024100920.1                     I 1 I 223
s Saimiri_cassiquiarensis.k141_2188234                       23339 2 +     46362 a-a
i Saimiri_cassiquiarensis.k141_2188234                   I 1 I 106
s Saimiri_macrodon.k141_716185                               23434 2 +     45824 a-a
i Saimiri_macrodon.k141_716185                           I 1 I 106
s Saimiri_oerstedii.k141_1487881                             40062 2 -     64574 a-a
i Saimiri_oerstedii.k141_1487881                         I 1 I 157
s Saimiri_sciureus.k141_2278166                               3068 2 -     23631 a-a
i Saimiri_sciureus.k141_2278166                          I 1 I 223
s Saimiri_ustus.k141_1484609                                 23330 2 -     61129 a-a
i Saimiri_ustus.k141_1484609                             I 1 C 0
s Sapajus_apella.ctg103                                    5420653 2 -   5703754 a-a
i Sapajus_apella.ctg103                                  I 1 C 0
s Sapajus_macrocephalus.k141_351809                          55694 2 -     80660 a-a
i Sapajus_macrocephalus.k141_351809                      I 1 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153222 2 -    313613 T-A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 1 C 0
s Semnopithecus_entellus.k141_11662                          19673 2 -     19888 A-A
i Semnopithecus_entellus.k141_11662                      I 1 I 4
s Semnopithecus_hypoleucos.k141_1615806                      26876 2 +     39453 a-a
i Semnopithecus_hypoleucos.k141_1615806                  I 1 I 107
s Semnopithecus_johnii.k141_670120                            7395 2 +     27826 a-a
i Semnopithecus_johnii.k141_670120                       I 1 I 106
s Semnopithecus_priam.k141_638794                             6916 2 -     19483 a-a
i Semnopithecus_priam.k141_638794                        I 1 I 107
s Semnopithecus_schistaceus.k141_1584426                      6984 2 +      7198 A-A
i Semnopithecus_schistaceus.k141_1584426                 I 1 I 4
s Semnopithecus_vetulus.k141_1200928                         15242 2 +     15514 a-a
i Semnopithecus_vetulus.k141_1200928                     I 1 I 4
s Solenodon_paradoxus.SolPar_flattened_line_126               3782 2 +   1910179 G-A
i Solenodon_paradoxus.SolPar_flattened_line_126          I 1 C 0
s Sorex_araneus.JH798187.1                                13651028 2 -  18376816 T-G
i Sorex_araneus.JH798187.1                               I 1 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30742 2 +     97271 T-A
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 1 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              18329 2 -    196729 T-A
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 C 0
s Sus_scrofa.CM000828.4                                    6810504 2 +  69701581 C-A
i Sus_scrofa.CM000828.4                                  I 1 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                10805 2 +     41958 T-A
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 1 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72627 2 +    116680 T-C
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 1 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118759 2 -    156842 T-A
i Tapirus_indicus.TapInd_scaffold_9301                   I 1 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387216 2 +    539355 T-A
i Tapirus_terrestris.TapTer_scaffold_755                 I 1 C 0
s Tarsius_lariang.k141_2201908                               26424 2 +     70052 a-a
i Tarsius_lariang.k141_2201908                           T 104 I 105
s Tarsius_wallacei.k141_254427                                1257 2 -     16117 a-a
i Tarsius_wallacei.k141_254427                           I 1 I 69
s Theropithecus_gelada.CM009954.1                        186428573 2 + 186847797 a-a
i Theropithecus_gelada.CM009954.1                        I 1 I 99
s Tolypeutes_matacus.TolMat_scaffold_228639                   6410 2 +      8208 T-A
i Tolypeutes_matacus.TolMat_scaffold_228639              I 1 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81198 2 +    610378 T-A
i Tonatia_saurophila.TonSau_scaffold_294                 I 1 C 0
s Trachypithecus_auratus.k141_722599                         10967 2 -     20410 a-a
i Trachypithecus_auratus.k141_722599                     I 1 I 107
s Trachypithecus_crepusculus.k141_582567                        81 2 -     12674 a-a
i Trachypithecus_crepusculus.k141_582567                 I 1 I 107
s Trachypithecus_cristatus.k141_580354                       11068 2 +     19930 a-a
i Trachypithecus_cristatus.k141_580354                   I 1 I 107
s Trachypithecus_francoisi.k141_1412647                       7495 2 -     19997 a-a
i Trachypithecus_francoisi.k141_1412647                  I 1 I 91
s Trachypithecus_geei.k141_277701                            47619 2 -     60166 a-a
i Trachypithecus_geei.k141_277701                        I 1 I 106
s Trachypithecus_germaini.k141_912491                        15090 2 -     27529 a-a
i Trachypithecus_germaini.k141_912491                    I 1 I 107
s Trachypithecus_hatinhensis.k141_143409                     15034 2 -     18194 a-a
i Trachypithecus_hatinhensis.k141_143409                 I 1 I 107
s Trachypithecus_laotum.k141_907409                           8762 2 -     21137 a-a
i Trachypithecus_laotum.k141_907409                      I 1 I 91
s Trachypithecus_leucocephalus.k141_587342                    7465 2 -     10723 a-a
i Trachypithecus_leucocephalus.k141_587342               I 1 I 91
s Trachypithecus_melamera.k141_434728                         6621 2 +      9834 a-a
i Trachypithecus_melamera.k141_434728                    I 1 I 107
s Trachypithecus_obscurus.k141_190785                        24934 2 +     32220 a-a
i Trachypithecus_obscurus.k141_190785                    I 1 I 107
s Trachypithecus_phayrei.ctg124                            5939036 2 +   6242583 a-a
i Trachypithecus_phayrei.ctg124                          I 1 I 107
s Trachypithecus_pileatus.k141_2007326                        8288 2 +     20839 a-a
i Trachypithecus_pileatus.k141_2007326                   I 1 I 106
s Trichechus_manatus.JH594705.1                            4293259 2 +  10818551 T-A
i Trichechus_manatus.JH594705.1                          I 1 C 0
s Tupaia_chinensis.KB320699.1                              2155667 2 +   4065304 A-G
i Tupaia_chinensis.KB320699.1                            C 0 I 206
s Tupaia_tana.TupTan_flattened_line_97126                     9318 2 -     10553 A-G
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   53327 2 -     77625 T-A
i Uropsilus_gracilis.UroGra_scaffold_12083               I 1 C 0
s Ursus_maritimus.KK499267.1                               4850447 2 -   5085361 T-A
i Ursus_maritimus.KK499267.1                             I 1 C 0
s Varecia_rubra.k141_590885                                  11469 2 +     50397 A-A
i Varecia_rubra.k141_590885                              I 1 I 1
s Varecia_variegata.k141_1128296                             11528 2 +     24756 A-A
i Varecia_variegata.k141_1128296                         I 1 I 1
s Vicugna_pacos.KN270157.1                                 5371885 2 -   5488506 T-A
i Vicugna_pacos.KN270157.1                               I 1 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10798 2 -     43706 T-A
i Vulpes_lagopus.VulLag_flattened_line_30954             I 1 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          5371 2 +     86975 T-A
i Zalophus_californianus.ZalCal_flattened_line_17732     I 1 C 0
e Mus_pahari.LT608297.1                                   31355125 13 -  89631738 T
e Mus_spretus.CM004101.1                                  90752527 13 - 130317789 T
e Mus_musculus.chr8                                       87650466 13 - 129401213 T
e Mus_caroli.LT608237.1                                   84361468 13 - 120012414 T
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      14994 0 +     63895 C
e Xerus_inauris.XerIna_scaffold_2302                          1129 38 +    224448 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              105507 17 +    114563 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Spermophilus_dauricus.KZ294078.1                         1953989 38 -   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11982 13 -     12148 T
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570728 13 +  90668790 T
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Psammomys_obesus.NESX01036370.1                            10498 13 -     21651 T
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             1766 24 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     28190 14 -     29689 I
e Peromyscus_maniculatus.KI615324.1                       18194880 13 -  18517816 T
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80254 13 +    102263 T
e Ondatra_zibethicus.OndZib_scaffold_46174                   25254 13 +     28053 T
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  746916 17 +  11899542 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Nannospalax_galili.KL204047.1                            2034165 0 -   3037898 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     71306 17 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5066 31 +     14296 T
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11260586 13 -  27267610 T
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182348 13 -  29670104 T
e Meriones_unguiculatus.MerUng_scaffold_7390                 32854 13 +    140813 T
e Marmota_marmota.CZRN01000018.1                          33103134 38 -  40650429 I
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276898 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Ictidomys_tridecemlineatus.JH393364.1                    7520938 34 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      83173 18 +    135385 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20662284 18 +  22651954 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32727 40 +     78134 T
e Glis_glis.GliGli_scaffold_19807                            31485 39 +     49224 T
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Fukomys_damarensis.KN121974.1                             850496 17 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Ellobius_talpinus.LOJH01081419.1                             538 13 +      8657 T
e Ellobius_lutescens.LOEQ01008920.1                          20407 13 -    110024 T
e Elephantulus_edwardii.JH947257.1                         1097711 4 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    36462 17 +     67921 I
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35827 17 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    837150 9 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11667673 13 + 224834208 T
e Cricetomys_gambianus.CriGam_scaffold_18520                 50293 0 +     63868 C
e Colobus_guereza.LG01                                   199948999 41 + 200372422 T
e Chinchilla_lanigera.JH722012.1                           1252869 16 +   2543920 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Castor_canadensis.CasCan_scaffold_2074                    137144 10 +    179628 I
e Capromys_pilorides.CapPil_scaffold_65020                    1120 17 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      12671 28 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74597 0 -     89534 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     70906 13 +     87051 T

a score=0.000000
s hg38.chrUn_KI270753v1                                       6878 1 +     62944 a
s Allenopithecus_nigroviridis.k141_3361533                   14809 1 -     52922 a
i Allenopithecus_nigroviridis.k141_3361533               I 119 C 0
s Allochrocebus_lhoesti.k141_4309873                         14725 1 -     28001 a
i Allochrocebus_lhoesti.k141_4309873                     I 99 C 0
s Allochrocebus_preussi.k141_1442296                          5221 1 -     18505 a
i Allochrocebus_preussi.k141_1442296                     I 99 C 0
s Allochrocebus_solatus.k141_166128                           6075 1 -     12518 a
i Allochrocebus_solatus.k141_166128                      I 99 C 0
s Alouatta_belzebul.k141_3560514                              7454 1 +     51355 a
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                 576 1 -     36483 a
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              11198 1 +     28687 a
i Alouatta_discolor.k141_566626                          I 114 C 0
s Alouatta_juara.k141_1509701                                24845 1 +     25266 a
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_918386                             570 1 -      9457 a
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_3472759                            18148 1 -     18578 a
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              3713 1 +     47717 a
i Alouatta_palliata.k141_2135620                         I 178 C 0
s Alouatta_puruensis.k141_362188                               244 1 +      5663 a
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             14864 1 +     50774 A
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  15677 1 -     33861 a
i Aotus_azarae.k141_3104676                              I 200 C 0
s Aotus_griseimembra.k141_2240599                            15713 1 -     34016 a
i Aotus_griseimembra.k141_2240599                        I 216 C 0
s Aotus_nancymaae.KZ198451.1                               4298102 1 -   5030052 a
i Aotus_nancymaae.KZ198451.1                             I 208 C 0
s Aotus_trivirgatus.k141_2152450                             15711 1 -     34685 a
i Aotus_trivirgatus.k141_2152450                         I 212 C 0
s Aotus_vociferans.k141_344750                               28835 1 -     47192 a
i Aotus_vociferans.k141_344750                           I 212 C 0
s Callibella_humilis.k141_1278103                             5489 1 -     10423 a
i Callibella_humilis.k141_1278103                        I 257 C 0
s Callimico_goeldii.k141_1091182                             24957 1 +     31915 a
i Callimico_goeldii.k141_1091182                         I 255 C 0
s Callithrix_geoffroyi.k119_512088                            5198 1 +      5267 g
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590643 1 - 189096842 a
i Callithrix_jacchus.pat_scaffold_3                      I 231 C 0
s Callithrix_kuhlii.k119_1164682                             11943 1 -     12001 G
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Carlito_syrichta.NW_007259797.1                           156041 1 -    496798 a
i Carlito_syrichta.NW_007259797.1                        T 76 I 24
s Cebuella_niveiventris.k141_1251222                         10124 1 -     11392 a
i Cebuella_niveiventris.k141_1251222                     I 267 C 0
s Cebuella_pygmaea.k141_1309012                               6192 1 -      7577 a
i Cebuella_pygmaea.k141_1309012                          I 237 C 0
s Cebus_albifrons.Contig27                                25652417 1 +  26074798 a
i Cebus_albifrons.Contig27                               I 433 I 433
s Cebus_olivaceus.k141_398305                                 1560 1 +      1777 A
i Cebus_olivaceus.k141_398305                            C 0 I 3
s Cebus_unicolor.k141_544048                                 49897 1 -     74725 a
i Cebus_unicolor.k141_544048                             C 0 I 3
s Cephalopachus_bancanus.k141_1423433                         5539 1 +     31688 a
i Cephalopachus_bancanus.k141_1423433                    I 115 T 115
s Cercocebus_atys.KQ010504.1                               4475734 1 +   4669795 a
i Cercocebus_atys.KQ010504.1                             I 99 C 0
s Cercocebus_chrysogaster.k141_1540778                         238 1 +     17872 a
i Cercocebus_chrysogaster.k141_1540778                   T 78 C 0
s Cercocebus_lunulatus.k141_3342297                            895 1 -     14043 a
i Cercocebus_lunulatus.k141_3342297                      I 99 C 0
s Cercocebus_torquatus.k141_3057011                           8928 1 +     27781 a
i Cercocebus_torquatus.k141_3057011                      I 96 C 0
s Cercopithecus_ascanius.k141_1024104                         9096 1 -     20310 a
i Cercopithecus_ascanius.k141_1024104                    I 99 C 0
s Cercopithecus_cephus.k141_1078548                          12076 1 +     29689 a
i Cercopithecus_cephus.k141_1078548                      I 100 C 0
s Cercopithecus_diana.k141_1150327                            6829 1 -     20078 a
i Cercopithecus_diana.k141_1150327                       I 99 C 0
s Cercopithecus_hamlyni.k141_187466                          14752 1 -     27936 a
i Cercopithecus_hamlyni.k141_187466                      I 99 C 0
s Cercopithecus_lowei.k141_1854285                            3616 1 -     17152 a
i Cercopithecus_lowei.k141_1854285                       I 99 C 0
s Cercopithecus_albogularis.ctg5                                38817155 1 +  39242232 a
i Cercopithecus_albogularis.ctg5                               I 99 C 0
s Cercopithecus_mona.ctg39                                21222847 1 -  21565898 a
i Cercopithecus_mona.ctg39                               I 99 C 0
s Cercopithecus_neglectus.k141_2526306                       39965 1 -     53127 a
i Cercopithecus_neglectus.k141_2526306                   I 99 C 0
s Cercopithecus_nictitans.k141_1119862                         216 1 +     13442 a
i Cercopithecus_nictitans.k141_1119862                   I 18 C 0
s Cercopithecus_petaurista.k141_807961                       14765 1 -     27947 a
i Cercopithecus_petaurista.k141_807961                   I 99 C 0
s Cercopithecus_pogonias.k141_822820                         14741 1 +     17596 a
i Cercopithecus_pogonias.k141_822820                     I 99 C 0
s Cercopithecus_roloway.k141_2581234                           788 1 +     14005 a
i Cercopithecus_roloway.k141_2581234                     I 99 C 0
s Chiropotes_albinasus.k141_2206961                            386 1 -     15524 a
i Chiropotes_albinasus.k141_2206961                      I 227 T 227
s Chlorocebus_aethiops.ctg25                              18428725 1 -  18827391 a
i Chlorocebus_aethiops.ctg25                             I 99 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15162 1 -     50209 a
i Chlorocebus_pygerythrus.k141_1025673                   I 99 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422162 1 + 135778131 a
i Chlorocebus_sabaeus.CM001947.1                         I 99 C 0
s Colobus_angolensis.KN981557.1                            1910671 1 +   2368649 a
i Colobus_angolensis.KN981557.1                          I 103 C 0
s Colobus_polykomos.k141_906115                              37205 1 +     84244 a
i Colobus_polykomos.k141_906115                          C 0 C 0
s Erythrocebus_patas.Contig38                             21205332 1 -  21539334 a
i Erythrocebus_patas.Contig38                            I 99 C 0
s Gorilla_beringei.k141_3596273                              16133 1 -     32273 a
i Gorilla_beringei.k141_3596273                          I 117 C 0
s Gorilla_gorilla.LT578341.1                             186338270 1 + 186649187 a
i Gorilla_gorilla.LT578341.1                             I 108 C 0
s Hoolock_leuconedys.ctg274                                    434938 1 +    630532 a
i Hoolock_leuconedys.ctg274                                 I 110 C 0
s Leontocebus_fuscicollis.k141_1820339                        7764 1 +     64341 a
i Leontocebus_fuscicollis.k141_1820339                   I 270 C 0
s Leontocebus_illigeri.k141_1304848                            104 1 -     35062 a
i Leontocebus_illigeri.k141_1304848                      T 100 C 0
s Leontocebus_nigricollis.k141_4610752                        7792 1 +     35603 a
i Leontocebus_nigricollis.k141_4610752                   I 257 C 0
s Leontopithecus_chrysomelas.k141_1519602                    29212 1 +     38576 a
i Leontopithecus_chrysomelas.k141_1519602                I 216 T 216
s Leontopithecus_rosalia.k141_464620                         25912 1 +     66356 a
i Leontopithecus_rosalia.k141_464620                     I 219 T 219
s Lophocebus_aterrimus.ctg367                              1437279 1 +   1826925 a
i Lophocebus_aterrimus.ctg367                            I 97 C 0
s Macaca_arctoides.k141_2326796                               6992 1 +     40492 A
i Macaca_arctoides.k141_2326796                          C 0 I 100
s Macaca_assamensis.Contig5                               59676251 1 +  60120075 A
i Macaca_assamensis.Contig5                              C 0 I 100
s Macaca_cyclopis.k119_18836                                 12764 1 -     26193 a
i Macaca_cyclopis.k119_18836                             C 0 I 103
s Macaca_fascicularis.k141_814140                            80548 1 -    114318 a
i Macaca_fascicularis.k141_814140                        C 0 I 103
s Macaca_fuscata.k119_255327                                  6239 1 -     23192 a
i Macaca_fuscata.k119_255327                             C 0 I 99
s Macaca_leonina.k141_3550399                                15708 1 -     29190 a
i Macaca_leonina.k141_3550399                            C 0 I 103
s Macaca_maura.k141_2733130                                  24273 1 +     37952 A
i Macaca_maura.k141_2733130                              C 0 I 103
s Macaca_mulatta.NC_041758.1                             186839362 1 + 187317192 a
i Macaca_mulatta.NC_041758.1                             C 0 I 103
s Macaca_nemestrina.KQ007038.1                            25457925 1 -  25927173 a
i Macaca_nemestrina.KQ007038.1                           C 0 I 103
s Macaca_nigra.k141_1655396                                  80121 1 +     89720 A
i Macaca_nigra.k141_1655396                              C 0 I 103
s Macaca_radiata.k141_3680011                                 7122 1 +     20474 A
i Macaca_radiata.k141_3680011                            C 0 I 103
s Macaca_siberu.k141_635500                                   6922 1 -     14993 a
i Macaca_siberu.k141_635500                              C 0 I 103
s Macaca_silenus.Contig273                                  329788 1 -    668171 a
i Macaca_silenus.Contig273                               C 0 I 103
s Macaca_thibetana.k99_256239                                 5238 1 -     24072 a
i Macaca_thibetana.k99_256239                            C 0 I 100
s Macaca_tonkeana.k141_1498238                               25860 1 -     45290 a
i Macaca_tonkeana.k141_1498238                           C 0 I 103
s Mandrillus_leucophaeus.scaffold280                      23937554 1 -  24302211 a
i Mandrillus_leucophaeus.scaffold280                     I 99 C 0
s Mandrillus_sphinx.Contig270                               351678 1 +    752769 a
i Mandrillus_sphinx.Contig270                            I 95 C 0
s Mico_argentatus.k141_1239457                                6003 1 -      7380 a
i Mico_argentatus.k141_1239457                           I 231 C 0
s Mico_humeralifer.k141_2457295                                232 1 +      1079 a
i Mico_humeralifer.k141_2457295                          I 214 C 0
s Mico_schneideri.k141_1950671                                      6015 1 -      7356 a
i Mico_schneideri.k141_1950671                                 I 231 C 0
s Miopithecus_ogouensis.k141_534055                           9263 1 -     28506 a
i Miopithecus_ogouensis.k141_534055                      I 83 C 0
s Nasalis_larvatus.k141_413338                               15262 1 +     21681 a
i Nasalis_larvatus.k141_413338                           I 107 C 0
s Pan_paniscus.KQ411613.1                                    44222 1 +     80009 a
i Pan_paniscus.KQ411613.1                                I 113 C 0
s Pan_troglodytes.CM009242.2                             189143124 1 + 189151597 a
i Pan_troglodytes.CM009242.2                             T 73 C 0
s Papio_anubis.CM001495.2                                183443356 1 + 183742232 a
i Papio_anubis.CM001495.2                                I 151 C 0
s Papio_cynocephalus.k141_4307930                             7002 1 +     20448 a
i Papio_cynocephalus.k141_4307930                        I 99 C 0
s Papio_hamadryas.Contig39                                20563814 1 +  20919399 a
i Papio_hamadryas.Contig39                               I 103 C 0
s Papio_kindae.k141_1936966                                   5746 1 +     41871 a
i Papio_kindae.k141_1936966                              I 99 C 0
s Papio_papio.k141_802527                                     9039 1 +     27711 a
i Papio_papio.k141_802527                                I 107 C 0
s Papio_ursinus.k141_3428135                                  9108 1 +      9205 a
i Papio_ursinus.k141_3428135                             I 95 C 0
s Piliocolobus_badius.k141_1234363                           43753 1 +     62158 a
i Piliocolobus_badius.k141_1234363                       I 87 C 0
s Piliocolobus_gordonorum.k141_381342                        38500 1 +     89929 a
i Piliocolobus_gordonorum.k141_381342                    I 103 C 0
s Piliocolobus_kirkii.k141_448987                            39916 1 +     51399 a
i Piliocolobus_kirkii.k141_448987                        I 103 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296154 1 -  14605196 a
i Piliocolobus_tephrosceles.PDMG02000141.1               I 103 C 0
s Pongo_abelii.CM009266.2                                189131260 1 + 189387572 a
i Pongo_abelii.CM009266.2                                I 109 C 0
s Pongo_pygmaeus.ctg66                                     9570867 1 +   9816681 a
i Pongo_pygmaeus.ctg66                                   I 108 C 0
s Presbytis_comata.k141_677006                               73438 1 -     81375 a
i Presbytis_comata.k141_677006                           I 103 C 0
s Presbytis_mitrata.k141_1087752                              5258 1 +     19060 a
i Presbytis_mitrata.k141_1087752                         I 103 C 0
s Pygathrix_cinerea.k141_1153803                             15271 1 -     91421 a
i Pygathrix_cinerea.k141_1153803                         I 107 C 0
s Pygathrix_nigripes_b.ctg100                                 7609391 1 +   7812017 a
i Pygathrix_nigripes_b.ctg100                               I 107 C 0
s Pygathrix_nigripes_a.k141_215492                             15243 1 -     72585 a
i Pygathrix_nigripes_a.k141_215492                         I 107 C 0
s Rhinopithecus_bieti.k119_217274                             6956 1 -     11128 a
i Rhinopithecus_bieti.k119_217274                        I 106 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236303 1 - 195417433 a
i Rhinopithecus_roxellana.NC_044550.1                    I 100 C 0
s Rhinopithecus_strykeri.ctg102                            7671961 1 +   7961872 a
i Rhinopithecus_strykeri.ctg102                          I 106 C 0
s Saguinus_bicolor.k141_8081                                   380 1 +     42994 a
i Saguinus_bicolor.k141_8081                             T 100 C 0
s Saguinus_imperator.k141_57697                                165 1 +      1030 a
i Saguinus_imperator.k141_57697                          I 147 C 0
s Saguinus_inustus.k141_3945547                                249 1 -      8737 a
i Saguinus_inustus.k141_3945547                          I 162 C 0
s Saguinus_labiatus.k141_285685                               8417 1 +      8564 g
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469731 1 + 209938924 a
i Saguinus_midas.LG03                                    I 464 C 0
s Saguinus_mystax.k141_374627                                 8366 1 -      9399 a
i Saguinus_mystax.k141_374627                            I 393 T 202
s Saimiri_boliviensis.NW_024100920.1                     119951108 1 - 121099817 a
i Saimiri_boliviensis.NW_024100920.1                     I 223 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23447 1 +     46362 a
i Saimiri_cassiquiarensis.k141_2188234                   I 106 C 0
s Saimiri_macrodon.k141_716185                               23542 1 +     45824 a
i Saimiri_macrodon.k141_716185                           I 106 C 0
s Saimiri_oerstedii.k141_1487881                             40221 1 -     64574 a
i Saimiri_oerstedii.k141_1487881                         I 157 C 0
s Saimiri_sciureus.k141_2278166                               3293 1 -     23631 a
i Saimiri_sciureus.k141_2278166                          I 223 C 0
s Saimiri_ustus.k141_1484609                                 23332 1 -     61129 g
i Saimiri_ustus.k141_1484609                             C 0 I 113
s Sapajus_apella.ctg103                                    5420655 1 -   5703754 a
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          55696 1 -     80660 a
i Sapajus_macrocephalus.k141_351809                      C 0 I 353
s Semnopithecus_entellus.k141_1672505                          135 1 -     12572 A
i Semnopithecus_entellus.k141_1672505                    I 14 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26985 1 +     39453 a
i Semnopithecus_hypoleucos.k141_1615806                  I 107 C 0
s Semnopithecus_johnii.k141_670120                            7503 1 +     27826 a
i Semnopithecus_johnii.k141_670120                       I 106 C 0
s Semnopithecus_priam.k141_638794                             7025 1 -     19483 a
i Semnopithecus_priam.k141_638794                        I 107 C 0
s Semnopithecus_schistaceus.k141_1572284                       326 1 -     12762 A
i Semnopithecus_schistaceus.k141_1572284                 I 14 C 0
s Semnopithecus_vetulus.k141_910252                            187 1 +     13763 A
i Semnopithecus_vetulus.k141_910252                      I 19 C 0
s Tarsius_lariang.k141_2201908                               26531 1 +     70052 a
i Tarsius_lariang.k141_2201908                           I 105 T 105
s Tarsius_wallacei.k141_254427                                1328 1 -     16117 a
i Tarsius_wallacei.k141_254427                           I 69 T 69
s Theropithecus_gelada.CM009954.1                        186428674 1 + 186847797 a
i Theropithecus_gelada.CM009954.1                        I 99 C 0
s Trachypithecus_auratus.k141_722599                         11076 1 -     20410 a
i Trachypithecus_auratus.k141_722599                     I 107 C 0
s Trachypithecus_crepusculus.k141_582567                       190 1 -     12674 a
i Trachypithecus_crepusculus.k141_582567                 I 107 C 0
s Trachypithecus_cristatus.k141_580354                       11177 1 +     19930 a
i Trachypithecus_cristatus.k141_580354                   I 107 C 0
s Trachypithecus_francoisi.k141_1412647                       7588 1 -     19997 a
i Trachypithecus_francoisi.k141_1412647                  I 91 C 0
s Trachypithecus_geei.k141_277701                            47727 1 -     60166 a
i Trachypithecus_geei.k141_277701                        I 106 C 0
s Trachypithecus_germaini.k141_912491                        15199 1 -     27529 a
i Trachypithecus_germaini.k141_912491                    I 107 C 0
s Trachypithecus_hatinhensis.k141_143409                     15143 1 -     18194 a
i Trachypithecus_hatinhensis.k141_143409                 I 107 C 0
s Trachypithecus_laotum.k141_907409                           8855 1 -     21137 a
i Trachypithecus_laotum.k141_907409                      I 91 C 0
s Trachypithecus_leucocephalus.k141_587342                    7558 1 -     10723 a
i Trachypithecus_leucocephalus.k141_587342               I 91 C 0
s Trachypithecus_melamera.k141_434728                         6730 1 +      9834 a
i Trachypithecus_melamera.k141_434728                    I 107 C 0
s Trachypithecus_obscurus.k141_190785                        25043 1 +     32220 a
i Trachypithecus_obscurus.k141_190785                    I 107 C 0
s Trachypithecus_phayrei.ctg124                            5939145 1 +   6242583 a
i Trachypithecus_phayrei.ctg124                          I 107 C 0
s Trachypithecus_pileatus.k141_2007326                        8396 1 +     20839 a
i Trachypithecus_pileatus.k141_2007326                   I 106 C 0
e Echinops_telfairi.JH980293.1                            48780406 0 + 111700974 C
e Otolemur_garnettii.GL873799.1                             696374 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         4211 0 +      8798 C
e Galago_senegalensis.k141_631886                             4370 0 +     11339 C
e Galago_moholi.ctg2040                                     426679 0 -    453645 C
e Mus_pahari.LT608297.1                                   31355125 13 -  89631738 T
e Mus_spretus.CM004101.1                                  90752527 13 - 130317789 T
e Mus_musculus.chr8                                       87650466 13 - 129401213 T
e Mus_caroli.LT608237.1                                   84361468 13 - 120012414 T
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Loris_tardigradus.ctg83                                  1004747 0 +   6120653 C
e Loris_lydekkerianus.k141_2539221                            5927 0 +     11245 C
e Perodicticus_potto.k141_1092580                             8587 0 +     25941 C
e Perodicticus_ibeanus.k141_855320                           10181 0 +     13100 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      14994 0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5373 0 +     86975 C
e Xerus_inauris.XerIna_scaffold_2302                          1129 38 +    224448 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 10800 0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5371887 0 -   5488506 C
e Varecia_variegata.k141_1128296                             11530 1 +     24756 I
e Varecia_rubra.k141_590885                                  11471 1 +     50397 I
e Ursus_maritimus.KK499267.1                               4850449 0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   53329 0 -     77625 C
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     9320 0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2155669 206 +   4065304 I
e Trichechus_manatus.JH594705.1                            4293261 0 +  10818551 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     81200 0 +    610378 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   6412 0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              105507 17 +    114563 I
e Tapirus_terrestris.TapTer_scaffold_755                    387218 0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      118761 0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 72629 0 +    116680 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                10807 0 +     41958 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6810506 0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629              18331 0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             30744 0 +     97271 C
e Spermophilus_dauricus.KZ294078.1                         1953989 38 -   3870691 I
e Sorex_araneus.JH798187.1                                13651030 0 -  18376816 C
e Solenodon_paradoxus.SolPar_flattened_line_126               3784 0 +   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_60841                    11982 13 -     12148 T
e Scalopus_aquaticus.ScaAqu_scaffold_662                    153224 0 -    313613 C
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                87814 0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570728 13 +  90668790 T
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20274334 0 -  38429054 C
e Pteropus_vampyrus.KN534172.1                                6846 0 -      8028 C
e Pteropus_alecto.KB030862.1                              22976793 0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         40243 0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            15078 0 -     21811 C
e Psammomys_obesus.NESX01036370.1                            10498 13 -     21651 T
e Propithecus_verreauxi.k141_956661                           4860 1 -      6182 I
e Propithecus_tattersalli.k141_790011                        28637 1 -     67325 I
e Propithecus_perrieri.k141_1200571                           4812 1 -     24134 I
e Propithecus_edwardsi.k141_1176054                          26625 1 +     35766 I
e Propithecus_diadema.k141_58108                              1147 1 -     13098 I
e Propithecus_coronatus.k141_347390                          29104 1 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     990792 1 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2596811 1 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 13362 0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             1766 24 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     28190 14 -     29689 I
e Peromyscus_maniculatus.KI615324.1                       18194880 13 -  18517816 T
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12662 0 -     78924 C
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4721268 0 -   8748460 C
e Panthera_pardus.KV860321.1                                264389 0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  151180 0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       462355 0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                        67147381 0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               9853 0 -     18566 C
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80254 13 +    102263 T
e Ondatra_zibethicus.OndZib_scaffold_46174                   25254 13 +     28053 T
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              506660 0 -   2017862 C
e Octodon_degus.JH651603.1                                  746916 17 +  11899542 I
e Ochotona_princeps.JH802162.1                             1363523 0 +   3988456 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761646 0 + 199412804 C
e Nycticebus_coucang.k141_1127096                              216 0 +      2075 C
e Nycticebus_bengalensis.LG01                            102586292 0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9149387 0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20306975 225 +  31847680 I
e Nannospalax_galili.KL204047.1                            2034165 0 -   3037898 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189268 0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_482318                         493 0 -       721 C
e Myotis_lucifugus.GL429869.1                              3903819 0 -   4330536 C
e Myotis_davidii.KB100139.1                                1587727 0 -   6019432 C
e Myotis_brandtii.KE162005.1                                280465 0 -  10118263 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     71306 17 -     80779 I
e Mustela_putorius.JH418006.1                               301244 0 -  14710649 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              5066 31 +     14296 T
e Murina_feae.MurFea_scaffold_85699                           6822 0 +     14753 C
e Mungos_mungo.MunMun_flattened_line_23663                   35430 0 +     37127 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 141625 0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Mirza_zaza.k141_952172                                      9096 1 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         5721 0 -      8324 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             34307 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1850626 0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11260586 13 -  27267610 T
e Micronycteris_hirsuta.MicHir_scaffold_52381                15659 0 -     19307 C
e Microgale_talazaci.MicTal_scaffold_6613                    22153 0 -    145209 C
e Microcebus_murinus.CM007674.1                           18291551 1 -  93316391 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182348 13 -  29670104 T
e Meriones_unguiculatus.MerUng_scaffold_7390                 32854 13 +    140813 T
e Mellivora_capensis.MelCap_flattened_line_69365             10053 0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                        10344 0 -    207569 C
e Marmota_marmota.CZRN01000018.1                          33103134 38 -  40650429 I
e Manis_pentadactyla.KN006162.1                              50492 3 -    317179 I
e Manis_javanica.JSZB01003497.1                              18503 3 +    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_8222                 90625 0 +     94391 C
e Lycaon_pictus.CM007581.1                                17955125 0 -  59628241 C
e Loxodonta_africana.GL010049.1                            4217335 0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     6500 0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3042853 0 +   3914936 C
e Lepilemur_septentrionalis.k141_185316                      27022 1 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          1626 1 +     25010 I
e Lepilemur_dorsalis.k141_577674                             29086 1 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         11025 1 -     23766 I
e Lemur_catta.scaffold_24                                 15524131 1 -  30322482 I
e Lasiurus_borealis.LasBor_scaffold_32767                    14141 28 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276898 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Indri_indri.k141_3655594                                   22569 1 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7520938 34 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      83173 18 +    135385 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  45025 0 +     55795 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                 907 0 +      7595 C
e Heterocephalus_glaber.JH602082.1                        20662284 18 +  22651954 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               242331 0 +    327341 C
e Hapalemur_occidentalis.k141_907772                         13616 1 -     16460 I
e Hapalemur_meridionalis.k141_248335                         13779 1 -     41752 I
e Hapalemur_griseus.k141_1511508                             13678 1 +     18253 I
e Hapalemur_gilberti.k141_488810                             12039 1 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           6890 1 -     19426 I
e Graphiurus_murinus.GraMur_scaffold_10447                   32727 40 +     78134 T
e Glis_glis.GliGli_scaffold_19807                            31485 39 +     49224 T
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Galeopterus_variegatus.GalVar_scaffold_108840               1230 0 -      9135 C
e Galagoides_demidoff.k141_1711393                            1683 0 +     41679 C
e Fukomys_damarensis.KN121974.1                             850496 17 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  9565 0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20195821 0 + 205367284 C
e Eulemur_sanfordi.k141_1122526                              13826 1 +    111500 I
e Eulemur_rufus.k141_1476633                                  4253 1 -     17153 I
e Eulemur_rubriventer.k141_774594                              200 1 +     13026 I
e Eulemur_mongoz.k141_232305                                 10709 1 +     97555 I
e Eulemur_macaco.k141_1562045                                12779 1 +     75513 I
e Eulemur_fulvus.k141_544389                                 14017 1 +     23973 I
e Eulemur_flavifrons.k141_1184614                            12782 1 +     26330 I
e Eulemur_coronatus.k141_885031                              15578 1 -     25546 I
e Eulemur_collaris.k141_377015                                6554 1 -     16928 I
e Eulemur_albifrons.k141_342033                              13851 1 -     14127 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3328249 0 -   7059049 C
e Equus_przewalskii.KK951119.1                               33400 0 +    498745 C
e Equus_caballus.CM000403.2                               18531372 0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1283551 0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2145725 0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16329316 0 -  41312741 C
e Ellobius_talpinus.LOJH01081419.1                             538 13 +      8657 T
e Ellobius_lutescens.LOEQ01008920.1                          20407 13 -    110024 T
e Elephantulus_edwardii.JH947257.1                         1097711 4 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Eidolon_helvum.KE759718.1                                  10534 0 +     11740 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    36462 17 +     67921 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    6045 0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  673293 0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8630133 0 +  20541912 C
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Daubentonia_madagascariensis.ctg71                      12537346 0 -  12879189 C
e Dasypus_novemcinctus.JH564415.1                            63546 0 +   2246927 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35827 17 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    837150 9 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             28498 0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_37019               3000 0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11667673 13 + 224834208 T
e Cricetomys_gambianus.CriGam_scaffold_18520                 50293 0 +     63868 C
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          14409 0 -     20389 C
e Condylura_cristata.JH655891.1                           17548109 0 -  53390261 C
e Colobus_guereza.LG01                                   199948999 41 + 200372422 T
e Choloepus_hoffmanni.KN194906.1                            173393 0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 18317 0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1252869 16 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           16494 1 +     57038 I
e Cheirogaleus_major.k141_333249                             21129 1 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870             539 0 -      8501 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2469 0 -     25243 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     93014 0 +    217609 C
e Castor_canadensis.CasCan_scaffold_2074                    137144 10 +    179628 I
e Carollia_perspicillata.CarPer_scaffold_92756                5120 0 -     11696 C
e Capromys_pilorides.CapPil_scaffold_65020                    1120 17 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18500397 0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17958885 0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9034620 0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    185234 0 -    185531 C
e CanFam4.chr16                                           17799177 0 -  60362399 C
e Camelus_ferus.KB017975.1                                  403125 0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2334842 0 -   7040546 C
e Camelus_bactrianus.KN276810.1                           10002384 0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              54375 1 +     85213 I
e Avahi_laniger.k141_765380                                  53748 1 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  4762 0 +     43469 C
e Arctocebus_calabarensis.k141_2318572                       11545 0 +     14667 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      12671 28 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      185353 0 +    412891 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74597 0 -     89534 C
e Ailurus_fulgens.LNAC01001112.1                             79358 0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9510588 0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     70906 13 +     87051 T
e Acinonyx_jubatus.LLWD01001279.1                           827327 0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6879  3 +     62944 ga------------------------------a
s Acinonyx_jubatus.LLWD01001279.1                           827327 28 -   1699592 TA-----TTCTGCTTCCAATATTAACATGTTGA
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510588 26 -  29979442 TA-------TTCTGCTGCTTAAGATGTAGAATG
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             79358 31 -    347723 CA--TTCTGCTTCCAGTATTAAGATGTAGAATG
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14810  3 -     52922 ga------------------------------a
i Allenopithecus_nigroviridis.k141_3361533               C 0 T 119
s Allochrocebus_lhoesti.k141_4309873                         14726  3 -     28001 ga------------------------------a
i Allochrocebus_lhoesti.k141_4309873                     C 0 T 99
s Allochrocebus_preussi.k141_1442296                          5222  3 -     18505 ga------------------------------a
i Allochrocebus_preussi.k141_1442296                     C 0 T 99
s Allochrocebus_solatus.k141_166128                           6076  3 -     12518 ga------------------------------a
i Allochrocebus_solatus.k141_166128                      C 0 T 99
s Alouatta_belzebul.k141_3560514                              7455  3 +     51355 ga------------------------------a
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                 577  3 -     36483 ga------------------------------a
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              11199  3 +     28687 ga------------------------------a
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1509701                                24846  3 +     25266 ga------------------------------a
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_918386                             571  3 -      9457 ga------------------------------a
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_3472759                            18149  3 -     18578 ga------------------------------a
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              3714  3 +     47717 ga------------------------------a
i Alouatta_palliata.k141_2135620                         C 0 T 178
s Alouatta_puruensis.k141_362188                               245  3 +      5663 ga------------------------------a
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             14865  3 +     50774 GA------------------------------A
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185353 28 +    412891 CA-----TTCTGATTTCAATATTAAGATATTAA
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  15678  3 -     33861 ga------------------------------a
i Aotus_azarae.k141_3104676                              C 0 T 200
s Aotus_griseimembra.k141_2240599                            15714  3 -     34016 ga------------------------------a
i Aotus_griseimembra.k141_2240599                        C 0 T 216
s Aotus_nancymaae.KZ198451.1                               4298103  3 -   5030052 ga------------------------------a
i Aotus_nancymaae.KZ198451.1                             C 0 T 208
s Aotus_trivirgatus.k141_2152450                             15712  3 -     34685 ga------------------------------a
i Aotus_trivirgatus.k141_2152450                         C 0 T 212
s Aotus_vociferans.k141_344750                               28836  3 -     47192 ga------------------------------a
i Aotus_vociferans.k141_344750                           C 0 T 212
s Aplodontia_rufa.AprRuf_scaffold_68852                      12699  1 +     20879 --------------------------------G
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 28 C 0
s Arctocebus_calabarensis.k141_2318572                       11545  3 +     14667 AA------------------------------T
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4762 28 +     43469 CA-----TTCTGATTTCAATATTCAGATATTAA
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  53749  3 -     92717 GG------------------------------A
i Avahi_laniger.k141_765380                              I 1 C 0
s Avahi_peyrierasi.k141_1424874                              54376  3 +     85213 GG------------------------------A
i Avahi_peyrierasi.k141_1424874                          I 1 C 0
s Callibella_humilis.k141_1278103                             5490  3 -     10423 ga------------------------------a
i Callibella_humilis.k141_1278103                        C 0 T 257
s Callimico_goeldii.k141_1091182                             24958  3 +     31915 ga------------------------------a
i Callimico_goeldii.k141_1091182                         C 0 T 255
s Callithrix_geoffroyi.k119_512088                            5199  3 +      5267 aa------------------------------a
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590644  3 - 189096842 ga------------------------------a
i Callithrix_jacchus.pat_scaffold_3                      C 0 T 231
s Callithrix_kuhlii.k119_1164682                             11944  3 -     12001 AA------------------------------A
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002384 28 -  17673402 CA-----TTCTGCTTTCAGTACTAAGATGTTAG
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334842 28 -   7040546 CA-----TTCTGCTTTCAGTACTAAGATGTTAG
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  403125 28 -   1652518 CA-----TTCTGCTTTCAGTACTAAGATGTTAG
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17799177 28 -  60362399 CA-----TTCTGCTTTCAATATTAAGATGTTAG
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    185234 28 -    185531 CA-----TTCTGCTTTCAATATTAAGATGTTAG
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034620 28 -   9314153 CA-----TTCTGCTTTCAATATTAAGATGTTAG
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17958885 28 -  59632846 CA-----TTCTGCTTTCAATATTAAGATGTTAG
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18500397 28 +  63665305 CA-----TTCTGCTTTCAATATTAAGATGTTAG
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1137  1 -     12242 --------------------------------A
i Capromys_pilorides.CapPil_scaffold_65020               I 17 C 0
s Carlito_syrichta.NW_007247396.1                           201420  3 +    308752 ga------------------------------a
i Carlito_syrichta.NW_007247396.1                        I 1 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5120 28 -     11696 CA-----TTCTGATTTCAATATTAAGATATTAA
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137154  1 +    179628 --------------------------------G
i Castor_canadensis.CasCan_scaffold_2074                 I 10 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     93014 28 +    217609 CT-----TTCTGCTTCCAATACAAAGATGTTAG
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                         10125  3 -     11392 ga------------------------------a
i Cebuella_niveiventris.k141_1251222                     C 0 T 267
s Cebuella_pygmaea.k141_1309012                               6193  3 -      7577 ga------------------------------a
i Cebuella_pygmaea.k141_1309012                          C 0 T 237
s Cebus_albifrons.Contig27                                25652851  3 +  26074798 ga------------------------------a
i Cebus_albifrons.Contig27                               I 433 T 433
s Cebus_olivaceus.k141_1764483                                 796  3 +     28840 ga------------------------------a
i Cebus_olivaceus.k141_1764483                           I 206 I 5
s Cebus_unicolor.k141_1837183                                  525  3 +     14051 ga------------------------------a
i Cebus_unicolor.k141_1837183                            I 205 I 17
s Cephalopachus_bancanus.k141_1423433                         5425  3 +     31688 ga------------------------------a
i Cephalopachus_bancanus.k141_1423433                    T 115 C 0
s Ceratotherium_simum.JH767749.1                          12231442 28 +  27778364 CA-----TTCTGCTTCCAATTTTAGGATATTAA
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2469 28 -     25243 CA-----CTCTGCTTCCAATTTTAGGATATTAA
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4475735  3 +   4669795 ga------------------------------a
i Cercocebus_atys.KQ010504.1                             C 0 T 99
s Cercocebus_chrysogaster.k141_1540778                         239  3 +     17872 ga------------------------------a
i Cercocebus_chrysogaster.k141_1540778                   C 0 I 11
s Cercocebus_lunulatus.k141_3342297                            896  3 -     14043 ga------------------------------a
i Cercocebus_lunulatus.k141_3342297                      C 0 T 99
s Cercocebus_torquatus.k141_3057011                           8929  3 +     27781 ga------------------------------a
i Cercocebus_torquatus.k141_3057011                      C 0 T 96
s Cercopithecus_ascanius.k141_1024104                         9097  3 -     20310 ga------------------------------a
i Cercopithecus_ascanius.k141_1024104                    C 0 T 99
s Cercopithecus_cephus.k141_1078548                          12077  3 +     29689 ga------------------------------a
i Cercopithecus_cephus.k141_1078548                      C 0 T 100
s Cercopithecus_diana.k141_1150327                            6830  3 -     20078 ga------------------------------a
i Cercopithecus_diana.k141_1150327                       C 0 T 99
s Cercopithecus_hamlyni.k141_187466                          14753  3 -     27936 ga------------------------------a
i Cercopithecus_hamlyni.k141_187466                      C 0 T 99
s Cercopithecus_lowei.k141_1854285                            3617  3 -     17152 ga------------------------------a
i Cercopithecus_lowei.k141_1854285                       C 0 T 99
s Cercopithecus_albogularis.ctg5                                38817156  3 +  39242232 ga------------------------------a
i Cercopithecus_albogularis.ctg5                               C 0 T 99
s Cercopithecus_mona.ctg39                                21222848  3 -  21565898 ga------------------------------a
i Cercopithecus_mona.ctg39                               C 0 T 99
s Cercopithecus_neglectus.k141_2526306                       39966  3 -     53127 ga------------------------------a
i Cercopithecus_neglectus.k141_2526306                   C 0 T 99
s Cercopithecus_nictitans.k141_1119862                         217  3 +     13442 ga------------------------------a
i Cercopithecus_nictitans.k141_1119862                   C 0 T 99
s Cercopithecus_petaurista.k141_807961                       14766  3 -     27947 ga------------------------------a
i Cercopithecus_petaurista.k141_807961                   C 0 T 99
s Cercopithecus_pogonias.k141_822820                         14742  3 +     17596 ga------------------------------a
i Cercopithecus_pogonias.k141_822820                     C 0 T 99
s Cercopithecus_roloway.k141_2581234                           789  3 +     14005 ga------------------------------a
i Cercopithecus_roloway.k141_2581234                     C 0 T 99
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             539 29 -      8501 CT----TTCTGTTTCTGGTATTAAAGATGCCAG
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             21130  3 -     52598 GG------------------------------G
i Cheirogaleus_major.k141_333249                         I 1 C 0
s Cheirogaleus_medius.k141_1055463                           16495  3 +     57038 GG------------------------------G
i Cheirogaleus_medius.k141_1055463                       I 1 C 0
s Chinchilla_lanigera.JH722012.1                           1252885  1 +   2543920 --------------------------------g
i Chinchilla_lanigera.JH722012.1                         I 16 C 0
s Chiropotes_albinasus.k141_2206961                            160  3 -     15524 ga------------------------------a
i Chiropotes_albinasus.k141_2206961                      T 227 I 232
s Chlorocebus_aethiops.ctg25                              18428726  3 -  18827391 ga------------------------------a
i Chlorocebus_aethiops.ctg25                             C 0 T 99
s Chlorocebus_pygerythrus.k141_1025673                       15163  3 -     50209 ga------------------------------a
i Chlorocebus_pygerythrus.k141_1025673                   C 0 T 99
s Chlorocebus_sabaeus.CM001947.1                         135422163  3 + 135778131 ga------------------------------a
i Chlorocebus_sabaeus.CM001947.1                         C 0 T 99
s Choloepus_didactylus.ChoDid_scaffold_45914                 18317 30 +     19366 TA---TTCTGTTTTCTGATATTAAAGATGTCAG
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            173393 30 +    839153 TA---TTCTGTTTTCTGATATTAAAGATGTCAG
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1910672  3 +   2368649 ga------------------------------a
i Colobus_angolensis.KN981557.1                          C 0 T 103
s Colobus_polykomos.k141_906115                              37206  3 +     84244 ga------------------------------a
i Colobus_polykomos.k141_906115                          C 0 T 103
s Condylura_cristata.JH655891.1                           17548109 28 -  53390261 GA-----TTCTGCTCCCAACACAAAGATGTTTA
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14409 28 -     20389 AA-----GTCTGCTTTCAATAATAAGATATTAA
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               3000 23 -     19598 CA----------TTCTTCCATAATTAAGGTATT
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28498 28 -     87169 TA-----TTCTGCTTACAATATTAAGATGTCAA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837159  1 +   1526836 --------------------------------G
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 9 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35844  1 +     51376 --------------------------------A
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 17 C 0
s Dasypus_novemcinctus.JH564415.1                            63546 29 +   2246927 CA----TTCTGTTTCTGATATTAAAGATGCCAG
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537346  3 -  12879189 GA------------------------------G
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630133 28 +  20541912 CA-----TTCTGACTTCAACATTGAGATATTAA
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673293 28 +   1390856 CA-----TTCGGCTTCCAATTTTAAGATATTAA
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6045 28 +    198055 CA-----TTCTGCTTCCAATTTTAGGATATTAA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36479  1 +     67921 --------------------------------G
i Dinomys_branickii.DinBra_scaffold_21862                I 17 C 0
s Echinops_telfairi.JH980293.1                            48780406 29 + 111700974 CA----AATGGTTTCTAATATTACAGATGTTAA
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.KE759718.1                                  10534 25 +     11740 CATTCtg-----cttttaat--a-agattttag
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Enhydra_lutris.KZ291758.1                               16329316 31 -  41312741 CA--TTCTGCTTCCAATATTAAGATGTAGAATG
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2145725 28 -  14770903 CG-----TTCTGATTTCAATATTAGGAGATCAA
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1283551 28 +   4378816 CA-----TTCTGCTTCCAATATTTACATGTTAA
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18531372 28 -  39960074 CA-----TTCTGCTTCCAATATTTACATGTTAA
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               33400 28 +    498745 CA-----TTCTGCTTCCAATATTTACATGTTAA
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3328249 28 -   7059049 CA-----TTCTACTTCCAATATTAATATGTTAA
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21205333  3 -  21539334 ga------------------------------a
i Erythrocebus_patas.Contig38                            C 0 T 99
s Eulemur_albifrons.k141_342033                              13852  3 -     14127 GG------------------------------G
i Eulemur_albifrons.k141_342033                          I 1 C 0
s Eulemur_collaris.k141_377015                                6555  3 -     16928 GG------------------------------G
i Eulemur_collaris.k141_377015                           I 1 C 0
s Eulemur_coronatus.k141_885031                              15579  3 -     25546 GG------------------------------G
i Eulemur_coronatus.k141_885031                          I 1 C 0
s Eulemur_flavifrons.k141_1184614                            12783  3 +     26330 GG------------------------------G
i Eulemur_flavifrons.k141_1184614                        I 1 C 0
s Eulemur_fulvus.k141_544389                                 14018  3 +     23973 GG------------------------------G
i Eulemur_fulvus.k141_544389                             I 1 C 0
s Eulemur_macaco.k141_1562045                                12780  3 +     75513 GG------------------------------G
i Eulemur_macaco.k141_1562045                            I 1 C 0
s Eulemur_mongoz.k141_232305                                 10710  3 +     97555 GG------------------------------G
i Eulemur_mongoz.k141_232305                             I 1 C 0
s Eulemur_rubriventer.k141_774594                              201  3 +     13026 GG------------------------------G
i Eulemur_rubriventer.k141_774594                        I 1 C 0
s Eulemur_rufus.k141_1476633                                  4254  3 -     17153 GG------------------------------G
i Eulemur_rufus.k141_1476633                             I 1 C 0
s Eulemur_sanfordi.k141_1122526                              13827  3 +    111500 GG------------------------------G
i Eulemur_sanfordi.k141_1122526                          I 1 C 0
s Felis_catus.CM001381.2                                  20236978 28 + 206538554 TA-----TTCTGCTTCCAATATTAACATGTCGA
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195821 28 + 205367284 TA-----TTCTGCTTCCAATATTAACATGTCGA
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  9565 28 -     36744 TA-----TTCTGCTTCCAATATTAACATGTCGA
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             850513  1 +   3816255 --------------------------------g
i Fukomys_damarensis.KN121974.1                          I 17 C 0
s Galago_moholi.ctg2040                                     426679  3 -    453645 GA------------------------------T
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4370  3 +     11339 GA------------------------------T
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            1683  3 +     41679 GA------------------------------T
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1230 24 -      9135 gagagagagagagagaga--gg-g-ga-----a
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            31446  1 +     49224 --------------------------------g
i Glis_glis.GliGli_scaffold_19807                        T 39 C 0
s Gorilla_beringei.k141_3596273                              16134  3 -     32273 ga------------------------------a
i Gorilla_beringei.k141_3596273                          C 0 T 117
s Gorilla_gorilla.LT578341.1                             186338271  3 + 186649187 ga------------------------------a
i Gorilla_gorilla.LT578341.1                             C 0 T 108
s Graphiurus_murinus.GraMur_scaffold_10447                   32687  1 +     78134 --------------------------------A
i Graphiurus_murinus.GraMur_scaffold_10447               T 40 C 0
s Hapalemur_alaotrensis.k141_170648                           6891  3 -     19426 GG------------------------------G
i Hapalemur_alaotrensis.k141_170648                      I 1 C 0
s Hapalemur_gilberti.k141_488810                             12040  3 -     15286 GG------------------------------G
i Hapalemur_gilberti.k141_488810                         I 1 C 0
s Hapalemur_griseus.k141_1511508                             13679  3 +     18253 GG------------------------------G
i Hapalemur_griseus.k141_1511508                         I 1 C 0
s Hapalemur_meridionalis.k141_248335                         13780  3 -     41752 GG------------------------------G
i Hapalemur_meridionalis.k141_248335                     I 1 C 0
s Hapalemur_occidentalis.k141_907772                         13617  3 -     16460 GG------------------------------G
i Hapalemur_occidentalis.k141_907772                     I 1 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242331 28 +    327341 TA-----TTCCACTTGAAATATTAAGATATCAA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20662302  1 +  22651954 --------------------------------g
i Heterocephalus_glaber.JH602082.1                       I 18 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                 907  2 +      7595 CA-------------------------------
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 I 26
s Hoolock_leuconedys.ctg274                                    434939  3 +    630532 ga------------------------------a
i Hoolock_leuconedys.ctg274                                 C 0 T 110
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45025 28 +     55795 TA-----TTCTGCTTGCAATAGTAAGATGTCAA
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83191  1 +    135385 --------------------------------G
i Hystrix_cristata.HysCri_scaffold_5660                  I 18 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7520972  1 -   7955117 --------------------------------g
i Ictidomys_tridecemlineatus.JH393364.1                  I 34 C 0
s Indri_indri.k141_3655594                                   22570  3 +     31101 GG------------------------------G
i Indri_indri.k141_3655594                               I 1 C 0
s Lasiurus_borealis.LasBor_scaffold_50988                    16393 28 -     29960 CG-----TTCCGATTTCAATCTTAGGAGATCAA
i Lasiurus_borealis.LasBor_scaffold_50988                T 33 n 28
s Lemur_catta.scaffold_24                                 15524132  3 -  30322482 GG------------------------------G
i Lemur_catta.scaffold_24                                I 1 C 0
s Leontocebus_fuscicollis.k141_1820339                        7765  3 +     64341 ga------------------------------a
i Leontocebus_fuscicollis.k141_1820339                   C 0 T 270
s Leontocebus_illigeri.k141_1304848                            105  3 -     35062 ga------------------------------a
i Leontocebus_illigeri.k141_1304848                      C 0 I 17
s Leontocebus_nigricollis.k141_4610752                        7793  3 +     35603 ga------------------------------a
i Leontocebus_nigricollis.k141_4610752                   C 0 T 257
s Leontopithecus_chrysomelas.k141_1519602                    28997  3 +     38576 aa------------------------------a
i Leontopithecus_chrysomelas.k141_1519602                T 216 C 0
s Leontopithecus_rosalia.k141_464620                         25694  3 +     66356 aa------------------------------a
i Leontopithecus_rosalia.k141_464620                     T 219 C 0
s Lepilemur_ankaranensis.k141_596936                         11026  3 -     23766 GG------------------------------G
i Lepilemur_ankaranensis.k141_596936                     I 1 C 0
s Lepilemur_dorsalis.k141_577674                             29087  3 +     45836 GG------------------------------G
i Lepilemur_dorsalis.k141_577674                         I 1 C 0
s Lepilemur_ruficaudatus.k141_121139                          1627  3 +     25010 GG------------------------------G
i Lepilemur_ruficaudatus.k141_121139                     I 1 C 0
s Lepilemur_septentrionalis.k141_185316                      27023  3 +     54090 GG------------------------------G
i Lepilemur_septentrionalis.k141_185316                  I 1 C 0
s Leptonychotes_weddellii.KB714746.1                       3042853 31 +   3914936 CA--TTCTGCTTCCAATATTAAGATGTAGAATG
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6500 30 -     14121 aaaa--gaaaaaaaaata-tggagagagggaga
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437280  3 +   1826925 ga------------------------------a
i Lophocebus_aterrimus.ctg367                            C 0 T 97
s Loris_lydekkerianus.k141_2539221                            5927  3 +     11245 GA------------------------------T
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004747  3 +   6120653 GA------------------------------T
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4217335 29 -  43346337 CA----GTCTGCTTCCAATATTAAAGATGTTAA
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17955125 28 -  59628241 CT-----TTCTGCTTTCAATATTAAGATGTTAG
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               7093  3 +     40492 ga------------------------------a
i Macaca_arctoides.k141_2326796                          I 100 T 100
s Macaca_assamensis.Contig5                               59676352  3 +  60120075 ga------------------------------a
i Macaca_assamensis.Contig5                              I 100 T 100
s Macaca_cyclopis.k119_18836                                 12868  3 -     26193 Ga------------------------------a
i Macaca_cyclopis.k119_18836                             I 103 T 103
s Macaca_fascicularis.k141_814140                            80652  3 -    114318 ga------------------------------a
i Macaca_fascicularis.k141_814140                        I 103 T 103
s Macaca_fuscata.k119_255327                                  6339  3 -     23192 ga------------------------------a
i Macaca_fuscata.k119_255327                             I 99 T 99
s Macaca_leonina.k141_3550399                                15812  3 -     29190 ga------------------------------a
i Macaca_leonina.k141_3550399                            I 103 T 103
s Macaca_maura.k141_2733130                                  24377  3 +     37952 ga------------------------------a
i Macaca_maura.k141_2733130                              I 103 T 103
s Macaca_mulatta.NC_041758.1                             186839466  3 + 187317192 ga------------------------------a
i Macaca_mulatta.NC_041758.1                             I 103 T 103
s Macaca_nemestrina.KQ007038.1                            25458029  3 -  25927173 ga------------------------------a
i Macaca_nemestrina.KQ007038.1                           I 103 T 103
s Macaca_nigra.k141_1655396                                  80225  3 +     89720 ga------------------------------a
i Macaca_nigra.k141_1655396                              I 103 T 103
s Macaca_radiata.k141_3680011                                 7226  3 +     20474 ga------------------------------a
i Macaca_radiata.k141_3680011                            I 103 T 103
s Macaca_siberu.k141_635500                                   7026  3 -     14993 GA------------------------------A
i Macaca_siberu.k141_635500                              I 103 T 103
s Macaca_silenus.Contig273                                  329892  3 -    668171 ga------------------------------a
i Macaca_silenus.Contig273                               I 103 T 103
s Macaca_thibetana.k99_256239                                 5339  3 -     24072 ga------------------------------a
i Macaca_thibetana.k99_256239                            I 100 T 100
s Macaca_tonkeana.k141_1498238                               25964  3 -     45290 ga------------------------------a
i Macaca_tonkeana.k141_1498238                           I 103 T 103
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90625 25 +     94391 CA--------ATCTGCTTTTAATAAGATATTAG
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23937555  3 -  24302211 ga------------------------------a
i Mandrillus_leucophaeus.scaffold280                     C 0 T 99
s Mandrillus_sphinx.Contig270                               351679  3 +    752769 ga------------------------------a
i Mandrillus_sphinx.Contig270                            C 0 T 95
s Manis_javanica.JSZB01003497.1                              18506 28 +    737560 TA-----TTCTGCTTCCAATATTAAGATGCTAA
i Manis_javanica.JSZB01003497.1                          I 3 C 0
s Manis_pentadactyla.KN006162.1                              50495 28 -    317179 TA-----TTCTGCTTCCAATATTAAGAAGCCAA
i Manis_pentadactyla.KN006162.1                          I 3 C 0
s Marmota_marmota.CZRN01000018.1                          33103172  1 -  40650429 --------------------------------g
i Marmota_marmota.CZRN01000018.1                         I 38 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        10344 25 -    207569 CA--------GTCTGCTTTCAATAAGCTATTAG
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10053 31 +     13704 CA--TTCTACTTCCAATATTAAGATATAGAATG
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mico_argentatus.k141_1239457                                6004  3 -      7380 ga------------------------------a
i Mico_argentatus.k141_1239457                           C 0 T 231
s Mico_humeralifer.k141_2457295                                233  3 +      1079 ga------------------------------a
i Mico_humeralifer.k141_2457295                          C 0 I 23
s Mico_schneideri.k141_1950671                                      6016  3 -      7356 ga------------------------------a
i Mico_schneideri.k141_1950671                                 C 0 T 231
s Microcebus_murinus.CM007674.1                           18291552  3 -  93316391 gg------------------------------g
i Microcebus_murinus.CM007674.1                          I 1 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    22153 29 -    145209 TA----AATGGCTTCCAATATTACAGAGGTTAG
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                15659 27 -     19307 CA------TTCTGATTTCAATATTAAGATATAA
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850626 20 +   8254450 CA-------------TTCTGATTTCAATATTAA
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34307 20 +     64694 CA-------------TTCTGATTTCAATATTAA
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9264  3 -     28506 ga------------------------------a
i Miopithecus_ogouensis.k141_534055                      C 0 T 83
s Mirounga_angustirostris.MirAng_flattened_line_93702         5721 31 -      8324 CA--TTCTGCTTCCAATATTAAGATGTAGAATG
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      9097  3 -     37649 GG------------------------------G
i Mirza_zaza.k141_952172                                 I 1 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141625 27 -    366855 CA------TTCTGATTTCAGTATAAGATATTAA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35430 28 +     37127 TA-----TTCCGTTTGCAATATTAAGATATCAA
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           6822 28 +     14753 CA-----TTCTGATTTCAATATTAAGAGATTAA
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              5035  1 +     14296 --------------------------------G
i Muscardinus_avellanarius.MusAve_scaffold_82313         T 31 C 0
s Mustela_putorius.JH418006.1                               301244 31 -  14710649 CA--TTCTGCTTCCAATATTAAGATGTAGAATG
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71323  1 -     80779 --------------------------------A
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 17 C 0
s Myotis_brandtii.KE162005.1                                280465 28 -  10118263 TG-----TTCTGATTTCAATATTAGGAGATCAA
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1587727 28 -   6019432 TG-----TTCTGATTTCAATTTTAGGAGATCAA
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3903819 28 -   4330536 TG-----TTCTGATTTCAAAATTAGGAGATCAA
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_482318                         493 28 -       721 TG-----TTCTGATTTCAATATTAGGAGATCAA
i Myotis_myotis.MyoMyo_scaffold_482318                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189268 29 +    196477 CA----TTCTGTTTCTGATATTAAAGATGCCAG
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nasalis_larvatus.k141_413338                               15263  3 +     21681 ga------------------------------a
i Nasalis_larvatus.k141_413338                           C 0 T 107
s Neomonachus_schauinslandi.NINY01007730.1                20307200 31 +  31847680 ca--ttcTGCTTCCAATATTAAGATGTAGAATG
i Neomonachus_schauinslandi.NINY01007730.1               I 225 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149387 28 -   9404916 CA-TTCTGCTTTCAATATTAAGa-tg-tta--g
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102586292  3 - 196305487 GA------------------------------T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              216  3 +      2075 GA------------------------------T
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761646  3 + 199412804 GA------------------------------T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1363523 33 +   3988456 aaaatagagaaagaaataatggagagaagaaga
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  746933  1 +  11899542 --------------------------------a
i Octodon_degus.JH651603.1                               I 17 C 0
s Odobenus_rosmarus.KB229312.1                              506660 31 -   2017862 CA--TTCTGCTTCCAATATTAAGATGTAGAATG
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9853 29 -     18566 CA----GTCTGCTTCCAATATAAAAGATGTTAA
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147381 28 + 174332312 aaaa--ga-aaa-aaata-tggagagagggaga
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462355 28 -    559221 CA-----TTCTGCTTTCAATATTAAGATGTTAG
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4211  3 +      8798 GA------------------------------T
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696374  3 -   1103335 GA------------------------------T
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    44223  3 +     80009 ga------------------------------a
i Pan_paniscus.KQ411613.1                                C 0 T 113
s Pan_troglodytes.CM009242.2                             189143125  3 + 189151597 ga------------------------------a
i Pan_troglodytes.CM009242.2                             C 0 I 5
s Panthera_onca.PanOnc_flattened_line_3271                  151180 28 +    230217 TA-----TTCTGCTTCCAATATTAAGATGTCTA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                264389 28 +  18783137 TA-----TTCTGCTTCCAATATTAAGAGGTCTA
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4721268 28 -   8748460 TA-----TTCTTCTTCCAATATTAAGATGTCTA
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183443357  3 + 183742232 ga------------------------------a
i Papio_anubis.CM001495.2                                C 0 T 151
s Papio_cynocephalus.k141_4307930                             7003  3 +     20448 ga------------------------------a
i Papio_cynocephalus.k141_4307930                        C 0 T 99
s Papio_hamadryas.Contig39                                20563815  3 +  20919399 ga------------------------------a
i Papio_hamadryas.Contig39                               C 0 T 103
s Papio_kindae.k141_1936966                                   5747  3 +     41871 ga------------------------------a
i Papio_kindae.k141_1936966                              C 0 T 99
s Papio_papio.k141_802527                                     9040  3 +     27711 ga------------------------------a
i Papio_papio.k141_802527                                C 0 T 107
s Papio_ursinus.k141_3428135                                  9109  3 +      9205 ga------------------------------a
i Papio_ursinus.k141_3428135                             C 0 T 95
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12662 28 -     78924 TA-----TCCCATTTCCAATATTAAGATGTCAA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10181  3 +     13100 AA------------------------------T
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8587  3 +     25941 AA------------------------------T
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28204  1 -     29689 --------------------------------G
i Petromus_typicus.PetTyp_scaffold_42190                 I 14 C 0
s Piliocolobus_badius.k141_1234363                           43754  3 +     62158 ga------------------------------a
i Piliocolobus_badius.k141_1234363                       C 0 T 87
s Piliocolobus_gordonorum.k141_381342                        38501  3 +     89929 ga------------------------------a
i Piliocolobus_gordonorum.k141_381342                    C 0 T 103
s Piliocolobus_kirkii.k141_448987                            39917  3 +     51399 ga------------------------------a
i Piliocolobus_kirkii.k141_448987                        C 0 T 103
s Piliocolobus_tephrosceles.PDMG02000141.1                14296155  3 -  14605196 ga------------------------------a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 T 103
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1790  1 +     22620 --------------------------------A
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 24 C 0
s Pongo_abelii.CM009266.2                                189131261  3 + 189387572 ga------------------------------a
i Pongo_abelii.CM009266.2                                C 0 T 109
s Pongo_pygmaeus.ctg66                                     9570868  3 +   9816681 ga------------------------------a
i Pongo_pygmaeus.ctg66                                   C 0 T 108
s Presbytis_comata.k141_677006                               73439  3 -     81375 ga------------------------------a
i Presbytis_comata.k141_677006                           C 0 T 103
s Presbytis_mitrata.k141_1087752                              5259  3 +     19060 ga------------------------------a
i Presbytis_mitrata.k141_1087752                         C 0 T 103
s Procavia_capensis.ProCapCap_scaffold_85530                 13362  2 -     22811 CA-------------------------------
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 I 26
s Prolemur_simus.MPIZ01000396.1                            2596812  3 -   4620579 gg------------------------------g
i Prolemur_simus.MPIZ01000396.1                          I 1 C 0
s Propithecus_coquerelli.NW_012148875.1                     990793  3 +   2598838 GG------------------------------g
i Propithecus_coquerelli.NW_012148875.1                  I 1 C 0
s Propithecus_coronatus.k141_347390                          29105  3 +     38485 GG------------------------------G
i Propithecus_coronatus.k141_347390                      I 1 C 0
s Propithecus_diadema.k141_58108                              1148  3 -     13098 GG------------------------------G
i Propithecus_diadema.k141_58108                         I 1 C 0
s Propithecus_edwardsi.k141_1176054                          26626  3 +     35766 GG------------------------------G
i Propithecus_edwardsi.k141_1176054                      I 1 C 0
s Propithecus_perrieri.k141_1200571                           4813  3 -     24134 GG------------------------------G
i Propithecus_perrieri.k141_1200571                      I 1 C 0
s Propithecus_tattersalli.k141_790011                        28638  3 -     67325 GG------------------------------G
i Propithecus_tattersalli.k141_790011                    I 1 C 0
s Propithecus_verreauxi.k141_956661                           4861  3 -      6182 GG------------------------------G
i Propithecus_verreauxi.k141_956661                      I 1 C 0
s Pteronotus_parnellii.KE909381.1                            15078 28 -     21811 CA-----TTCTGATTTTAATATTAAGCTATTAA
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40243 31 +     42204 CA--TTCTGCTTCCAATACTAAGATGTAGAATG
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22976793 25 +  28871421 CA--------TTCTGCTTTTAATAAGATATTAG
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                6846 25 -      8028 CA--------TTCTGCTTTTAATAAGATATTAG
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20274334 28 -  38429054 TG-----TTCTGCTTCCAATATTAACATGTTGA
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15272  3 -     91421 ga------------------------------a
i Pygathrix_cinerea.k141_1153803                         C 0 T 107
s Pygathrix_nigripes_b.ctg100                                 7609392  3 +   7812017 ga------------------------------a
i Pygathrix_nigripes_b.ctg100                               C 0 T 107
s Pygathrix_nigripes_a.k141_215492                             15244  3 -     72585 ga------------------------------a
i Pygathrix_nigripes_a.k141_215492                         C 0 T 107
s Rhinopithecus_bieti.k119_217274                             6957  3 -     11128 gg------------------------------a
i Rhinopithecus_bieti.k119_217274                        C 0 T 106
s Rhinopithecus_roxellana.NC_044550.1                     91236304  3 - 195417433 gg------------------------------a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 T 100
s Rhinopithecus_strykeri.ctg102                            7671962  3 +   7961872 gg------------------------------a
i Rhinopithecus_strykeri.ctg102                          C 0 T 106
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87814 25 -     96226 CA--------TTCTGCTTTTAATAAGATATTAG
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_8081                                   381  3 +     42994 ga------------------------------a
i Saguinus_bicolor.k141_8081                             C 0 I 5
s Saguinus_imperator.k141_57697                                166  3 +      1030 ga------------------------------a
i Saguinus_imperator.k141_57697                          C 0 I 17
s Saguinus_inustus.k141_3945547                                250  3 -      8737 ga------------------------------a
i Saguinus_inustus.k141_3945547                          C 0 I 17
s Saguinus_labiatus.k141_285685                               8418  3 +      8564 aa------------------------------a
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469732  3 + 209938924 ga------------------------------a
i Saguinus_midas.LG03                                    C 0 T 464
s Saguinus_mystax.k141_374627                                 8165  3 -      9399 Ga------------------------------a
i Saguinus_mystax.k141_374627                            T 202 T 191
s Saimiri_boliviensis.NW_024100920.1                     119951109  3 - 121099817 ga------------------------------a
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23448  3 +     46362 ga------------------------------a
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               23543  3 +     45824 ga------------------------------a
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             40222  3 -     64574 ga------------------------------a
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               3294  3 -     23631 ga------------------------------a
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Sapajus_apella.ctg103                                    5420656  3 -   5703754 aa------------------------------g
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          56050  3 -     80660 ga------------------------------a
i Sapajus_macrocephalus.k141_351809                      I 353 T 353
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153224 28 -    313613 GA-----TTCTGCTCCCAATACAAAGATGTTTA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                          136  3 -     12572 GA------------------------------A
i Semnopithecus_entellus.k141_1672505                    C 0 I 5
s Semnopithecus_hypoleucos.k141_1615806                      26986  3 +     39453 ga------------------------------a
i Semnopithecus_hypoleucos.k141_1615806                  C 0 T 107
s Semnopithecus_johnii.k141_670120                            7504  3 +     27826 ga------------------------------a
i Semnopithecus_johnii.k141_670120                       C 0 T 106
s Semnopithecus_priam.k141_638794                             7026  3 -     19483 ga------------------------------a
i Semnopithecus_priam.k141_638794                        C 0 T 107
s Semnopithecus_schistaceus.k141_1572284                       327  3 -     12762 GA------------------------------A
i Semnopithecus_schistaceus.k141_1572284                 C 0 I 5
s Semnopithecus_vetulus.k141_910252                            188  3 +     13763 GA------------------------------A
i Semnopithecus_vetulus.k141_910252                      C 0 I 5
s Solenodon_paradoxus.SolPar_flattened_line_126               3784 25 +   1910179 CG--------CTCTGAATGCAATGTGAAGTTGA
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13651030 21 -  18376816 CA------------TTCTTCCATTATTAGCATG
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1954027  1 -   3870691 --------------------------------g
i Spermophilus_dauricus.KZ294078.1                       I 38 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30744 31 +     97271 CA--TTCTGCTTCCAATATTCAGATGTAGAATG
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              18331 27 -    196729 CA------TTCCGCTGCAATATTAAGATATCAA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6810506 28 +  69701581 TA-----TTCTGCTTCCAATACAAACATGTTAA
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                10807 28 +     41958 CA-----TTCTGATTTCAATATTAAGATGTTAA
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72629 29 +    116680 CA----TTCTGTTTCTGATATTAAAGATGCCAG
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118761 28 -    156842 CA-----TTCTGCTTCCAACATTAAGATGTTAA
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387218 28 +    539355 CA-----TTCTGCTTCCAATATTAAGATGTTAA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               26427  3 +     70052 ga------------------------------a
i Tarsius_lariang.k141_2201908                           T 105 C 0
s Tarsius_wallacei.k141_254427                                1260  3 -     16117 GA------------------------------A
i Tarsius_wallacei.k141_254427                           T 69 C 0
s Theropithecus_gelada.CM009954.1                        186428675  3 + 186847797 ga------------------------------a
i Theropithecus_gelada.CM009954.1                        C 0 T 99
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105524  1 +    114563 --------------------------------C
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 17 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   6412 29 +      8208 CA----TCCTGTTTCTGATATTAAAGATGCCAG
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81200 28 +    610378 CA-----TTCTGATTTCAGTATTAAGATACTAA
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         11077  3 -     20410 ga------------------------------a
i Trachypithecus_auratus.k141_722599                     C 0 T 107
s Trachypithecus_crepusculus.k141_582567                       191  3 -     12674 ga------------------------------a
i Trachypithecus_crepusculus.k141_582567                 C 0 T 107
s Trachypithecus_cristatus.k141_580354                       11178  3 +     19930 ga------------------------------a
i Trachypithecus_cristatus.k141_580354                   C 0 T 107
s Trachypithecus_francoisi.k141_1412647                       7589  3 -     19997 ga------------------------------a
i Trachypithecus_francoisi.k141_1412647                  C 0 T 91
s Trachypithecus_geei.k141_277701                            47728  3 -     60166 ga------------------------------a
i Trachypithecus_geei.k141_277701                        C 0 T 106
s Trachypithecus_germaini.k141_912491                        15200  3 -     27529 ga------------------------------a
i Trachypithecus_germaini.k141_912491                    C 0 T 107
s Trachypithecus_hatinhensis.k141_143409                     15144  3 -     18194 ga------------------------------a
i Trachypithecus_hatinhensis.k141_143409                 C 0 T 107
s Trachypithecus_laotum.k141_907409                           8856  3 -     21137 ga------------------------------a
i Trachypithecus_laotum.k141_907409                      C 0 T 91
s Trachypithecus_leucocephalus.k141_587342                    7559  3 -     10723 ga------------------------------a
i Trachypithecus_leucocephalus.k141_587342               C 0 T 91
s Trachypithecus_melamera.k141_434728                         6731  3 +      9834 ga------------------------------a
i Trachypithecus_melamera.k141_434728                    C 0 T 107
s Trachypithecus_obscurus.k141_190785                        25044  3 +     32220 ga------------------------------a
i Trachypithecus_obscurus.k141_190785                    C 0 T 107
s Trachypithecus_phayrei.ctg124                            5939146  3 +   6242583 ga------------------------------a
i Trachypithecus_phayrei.ctg124                          C 0 T 107
s Trachypithecus_pileatus.k141_2007326                        8397  3 +     20839 ga------------------------------a
i Trachypithecus_pileatus.k141_2007326                   C 0 T 106
s Trichechus_manatus.JH594705.1                            4293261  2 +  10818551 CA-------------------------------
i Trichechus_manatus.JH594705.1                          C 0 I 26
s Tupaia_chinensis.KB320699.1                              2155875 25 +   4065304 ga--gggactagga-ggaa-g-ag-gagga--a
i Tupaia_chinensis.KB320699.1                            I 206 T 215
s Tupaia_tana.TupTan_flattened_line_97126                     9320  2 -     10553 GA-------------------------------
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 18
s Uropsilus_gracilis.UroGra_scaffold_12083                   53329 28 -     77625 GA-----TTCTGCTTCAAACATAAAGATGTTCA
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4850449 26 -   5085361 TA-------TTCTGCTTCTTAAGATGTAGAATG
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  11472  3 +     50397 GG------------------------------G
i Varecia_rubra.k141_590885                              I 1 C 0
s Varecia_variegata.k141_1128296                             11531  3 +     24756 GG------------------------------G
i Varecia_variegata.k141_1128296                         I 1 C 0
s Vicugna_pacos.KN270157.1                                 5371887  2 -   5488506 CT-------------------------------
i Vicugna_pacos.KN270157.1                               C 0 I 25
s Vulpes_lagopus.VulLag_flattened_line_30954                 10800 28 -     43706 CA-----TTCTGCTTTCAATATTAAGATGTTAG
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          1167  1 +    224448 --------------------------------g
i Xerus_inauris.XerIna_scaffold_2302                     I 38 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          5373 31 +     86975 CA--TTCTGATTCCAATATTAAGATGTATAATG
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Saimiri_ustus.k141_1484609                                 23333 113 -     61129 I
e Mus_pahari.LT608297.1                                   31355125 13 -  89631738 T
e Mus_spretus.CM004101.1                                  90752527 13 - 130317789 T
e Mus_musculus.chr8                                       87650466 13 - 129401213 T
e Mus_caroli.LT608237.1                                   84361468 13 - 120012414 T
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      14994  0 +     63895 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Sigmodon_hispidus.SigHis_scaffold_60841                    11982 13 -     12148 T
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570728 13 +  90668790 T
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Psammomys_obesus.NESX01036370.1                            10498 13 -     21651 T
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Peromyscus_maniculatus.KI615324.1                       18194880 13 -  18517816 T
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80254 13 +    102263 T
e Ondatra_zibethicus.OndZib_scaffold_46174                   25254 13 +     28053 T
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Nannospalax_galili.KL204047.1                            2034165  0 -   3037898 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11260586 13 -  27267610 T
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182348 13 -  29670104 T
e Meriones_unguiculatus.MerUng_scaffold_7390                 32854 13 +    140813 T
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276898  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Ellobius_talpinus.LOJH01081419.1                             538 13 +      8657 T
e Ellobius_lutescens.LOEQ01008920.1                          20407 13 -    110024 T
e Elephantulus_edwardii.JH947257.1                         1097711  4 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cricetulus_griseus.LT883664.1                           11667673 13 + 224834208 T
e Cricetomys_gambianus.CriGam_scaffold_18520                 50293  0 +     63868 C
e Colobus_guereza.LG01                                   199948999 41 + 200372422 T
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74597  0 -     89534 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     70906 13 +     87051 T

a score=0.000000
s hg38.chrUn_KI270753v1                                       6882 5 +     62944 a--g----a---tg
s Acinonyx_jubatus.LLWD01001279.1                           827355 5 -   1699592 C--A----G---AA
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 48
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510614 5 -  29979442 T--A----G---AA
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 63
s Ailurus_fulgens.LNAC01001112.1                             79389 5 -    347723 C--A----G---AA
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 64
s Allenopithecus_nigroviridis.k141_3361533                   14694 5 -     52922 g--a----g---aa
i Allenopithecus_nigroviridis.k141_3361533               T 119 C 0
s Allochrocebus_lhoesti.k141_4309873                         14630 5 -     28001 g--a----g---aa
i Allochrocebus_lhoesti.k141_4309873                     T 99 C 0
s Allochrocebus_preussi.k141_1442296                          5126 5 -     18505 g--a----g---aa
i Allochrocebus_preussi.k141_1442296                     T 99 C 0
s Allochrocebus_solatus.k141_166128                           5980 5 -     12518 g--a----g---aa
i Allochrocebus_solatus.k141_166128                      T 99 C 0
s Alouatta_belzebul.k141_3560514                              7458 5 +     51355 g--g----g---ag
i Alouatta_belzebul.k141_3560514                         C 0 I 184
s Alouatta_caraya.k141_1701091                                 580 5 -     36483 g--g----g---ag
i Alouatta_caraya.k141_1701091                           C 0 I 170
s Alouatta_discolor.k141_566626                              11202 5 +     28687 a--g----a---tg
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1509701                                24849 1 +     25266 -------------g
i Alouatta_juara.k141_1509701                            C 0 I 181
s Alouatta_macconnelli.k141_918386                             574 5 -      9457 g--g----g---ag
i Alouatta_macconnelli.k141_918386                       C 0 I 173
s Alouatta_nigerrima.k141_3472759                            18152 5 -     18578 g--g----g---ag
i Alouatta_nigerrima.k141_3472759                        C 0 I 181
s Alouatta_palliata.k141_2135620                              3539 5 +     47717 G--A----G---AA
i Alouatta_palliata.k141_2135620                         T 178 I 178
s Alouatta_puruensis.k141_362188                               248 1 +      5663 -------------g
i Alouatta_puruensis.k141_362188                         C 0 I 185
s Alouatta_seniculus.k141_117119                             14868 1 +     50774 -------------G
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185381 5 +    412891 G--A----G---AA
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 64
s Aotus_azarae.k141_3104676                                  15481 5 -     33861 g--a----g---aa
i Aotus_azarae.k141_3104676                              T 200 C 0
s Aotus_griseimembra.k141_2240599                            15501 5 -     34016 g--a----g---aa
i Aotus_griseimembra.k141_2240599                        T 216 C 0
s Aotus_nancymaae.KZ198451.1                               4297898 5 -   5030052 g--a----g---aa
i Aotus_nancymaae.KZ198451.1                             T 208 C 0
s Aotus_trivirgatus.k141_2152450                             15503 5 -     34685 g--a----g---aa
i Aotus_trivirgatus.k141_2152450                         T 212 C 0
s Aotus_vociferans.k141_344750                               28627 5 -     47192 g--a----g---aa
i Aotus_vociferans.k141_344750                           T 212 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      12700 5 +     20879 G--A----A---AG
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       11548 8 +     14667 G--GGG-GG---GG
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4790 5 +     43469 C--A----G---AA
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 63
s Avahi_laniger.k141_765380                                  53752 7 -     92717 GCCA----G---GG
i Avahi_laniger.k141_765380                              C 0 I 1
s Avahi_peyrierasi.k141_1424874                              54379 7 +     85213 GCCA----G---GG
i Avahi_peyrierasi.k141_1424874                          C 0 I 1
s Callibella_humilis.k141_1278103                             5236 5 -     10423 g--a----g---aa
i Callibella_humilis.k141_1278103                        T 257 C 0
s Callimico_goeldii.k141_1091182                             24706 6 +     31915 g--a----g--aaa
i Callimico_goeldii.k141_1091182                         T 255 C 0
s Callithrix_geoffroyi.k119_512088                            5202 5 +      5267 g--a----g---aa
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590416 5 - 189096842 g--a----g---aa
i Callithrix_jacchus.pat_scaffold_3                      T 231 C 0
s Callithrix_kuhlii.k119_1164682                             11947 5 -     12001 G--A----G---AA
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002412 5 -  17673402 A--A----G---AA
i Camelus_bactrianus.KN276810.1                          C 0 I 68
s Camelus_dromedarius.KN272107.1                           2334870 5 -   7040546 A--A----G---AA
i Camelus_dromedarius.KN272107.1                         C 0 I 68
s Camelus_ferus.KB017975.1                                  403153 5 -   1652518 A--A----G---AA
i Camelus_ferus.KB017975.1                               C 0 I 68
s CanFam4.chr16                                           17799205 5 -  60362399 C--A----G---AA
i CanFam4.chr16                                          C 0 I 78
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    185262 5 -    185531 C--A----G---AA
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 I 63
s Canis_lupus_dingo.QKWQ01000480.1                         9034648 5 -   9314153 C--A----G---AA
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 63
s Canis_lupus_familiaris.chr16                            17958913 5 -  59632846 C--A----G---AA
i Canis_lupus_familiaris.chr16                           C 0 I 63
s Canis_lupus_orion.HG994398.1                            18500425 5 +  63665305 C--A----G---AA
i Canis_lupus_orion.HG994398.1                           C 0 I 63
s Capromys_pilorides.CapPil_scaffold_65020                    1138 5 -     12242 A--G----A---GG
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007247396.1                           201423 5 +    308752 g--g----a---ag
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5148 5 -     11696 G--A----G---AA
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 59
s Castor_canadensis.CasCan_scaffold_2074                    137155 5 +    179628 G--G----T---AA
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     93042 5 +    217609 A--A----G---TA
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 74
s Cebuella_niveiventris.k141_1251222                          9861 5 -     11392 g--a----g---aa
i Cebuella_niveiventris.k141_1251222                     T 267 C 0
s Cebuella_pygmaea.k141_1309012                               5959 5 -      7577 g--a----g---aa
i Cebuella_pygmaea.k141_1309012                          T 237 C 0
s Cebus_albifrons.Contig27                                25652421 5 +  26074798 a--a----g---ga
i Cebus_albifrons.Contig27                               T 433 T 434
s Cebus_olivaceus.k141_398305                                 1564 3 +      1777 g--a----g-----
i Cebus_olivaceus.k141_398305                            I 3 I 5
s Cebus_unicolor.k141_544048                                 49901 3 -     74725 g--a----g-----
i Cebus_unicolor.k141_544048                             I 3 I 1
s Cephalopachus_bancanus.k141_1423433                         5428 5 +     31688 g--g----a---ag
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12231470 5 +  27778364 G--A----G---AA
i Ceratotherium_simum.JH767749.1                         C 0 I 64
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2497 5 -     25243 G--A----G---AA
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 I 64
s Cercocebus_atys.KQ010504.1                               4475639 5 +   4669795 g--a----g---aa
i Cercocebus_atys.KQ010504.1                             T 99 C 0
s Cercocebus_chrysogaster.k141_393940                        14184 5 -     19203 g--a----g---aa
i Cercocebus_chrysogaster.k141_393940                    I 4 C 0
s Cercocebus_lunulatus.k141_3342297                            800 5 -     14043 g--a----g---aa
i Cercocebus_lunulatus.k141_3342297                      T 99 C 0
s Cercocebus_torquatus.k141_3057011                           8836 5 +     27781 g--a----g---aa
i Cercocebus_torquatus.k141_3057011                      T 96 C 0
s Cercopithecus_ascanius.k141_1024104                         9001 5 -     20310 g--a----g---aa
i Cercopithecus_ascanius.k141_1024104                    T 99 C 0
s Cercopithecus_cephus.k141_1078548                          11980 5 +     29689 g--a----g---aa
i Cercopithecus_cephus.k141_1078548                      T 100 C 0
s Cercopithecus_diana.k141_1150327                            6734 5 -     20078 g--a----g---aa
i Cercopithecus_diana.k141_1150327                       T 99 C 0
s Cercopithecus_hamlyni.k141_187466                          14657 5 -     27936 g--a----g---aa
i Cercopithecus_hamlyni.k141_187466                      T 99 C 0
s Cercopithecus_lowei.k141_1854285                            3521 5 -     17152 g--a----g---aa
i Cercopithecus_lowei.k141_1854285                       T 99 C 0
s Cercopithecus_albogularis.ctg5                                38817060 5 +  39242232 g--a----g---aa
i Cercopithecus_albogularis.ctg5                               T 99 C 0
s Cercopithecus_mona.ctg39                                21222752 5 -  21565898 g--a----g---aa
i Cercopithecus_mona.ctg39                               T 99 C 0
s Cercopithecus_neglectus.k141_2526306                       39870 5 -     53127 g--a----g---aa
i Cercopithecus_neglectus.k141_2526306                   T 99 C 0
s Cercopithecus_nictitans.k141_1119862                         121 5 +     13442 g--a----g---aa
i Cercopithecus_nictitans.k141_1119862                   T 99 C 0
s Cercopithecus_petaurista.k141_807961                       14670 5 -     27947 g--a----g---aa
i Cercopithecus_petaurista.k141_807961                   T 99 C 0
s Cercopithecus_pogonias.k141_822820                         14646 5 +     17596 g--a----g---aa
i Cercopithecus_pogonias.k141_822820                     T 99 C 0
s Cercopithecus_roloway.k141_2581234                           693 5 +     14005 g--a----g---aa
i Cercopithecus_roloway.k141_2581234                     T 99 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             568 4 -      8501 ---A----G---AA
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 I 65
s Cheirogaleus_major.k141_333249                             21133 7 -     52598 GCCG----G---GG
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16498 7 +     57038 GCTG----G---GG
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1252886 5 +   2543920 g--g----a---ag
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2813271                          11113 5 +     11226 G--A----C---AA
i Chiropotes_albinasus.k141_2813271                      I 7 I 3
s Chlorocebus_aethiops.ctg25                              18428630 5 -  18827391 g--a----g---aa
i Chlorocebus_aethiops.ctg25                             T 99 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15067 5 -     50209 g--a----g---aa
i Chlorocebus_pygerythrus.k141_1025673                   T 99 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422067 5 + 135778131 g--a----c---aa
i Chlorocebus_sabaeus.CM001947.1                         T 99 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 18347 5 +     19366 A--A----G---AA
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 I 65
s Choloepus_hoffmanni.KN194906.1                            173423 5 +    839153 A--A----G---AA
i Choloepus_hoffmanni.KN194906.1                         C 0 I 65
s Colobus_angolensis.KN981557.1                            1910572 5 +   2368649 g--a----g---ag
i Colobus_angolensis.KN981557.1                          T 103 C 0
s Colobus_polykomos.k141_906115                              37106 5 +     84244 g--a----g---ag
i Colobus_polykomos.k141_906115                          T 103 C 0
s Condylura_cristata.JH655891.1                           17548137 5 -  53390261 C--A----G---AA
i Condylura_cristata.JH655891.1                          C 0 I 67
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14437 5 -     20389 A--A----G---AA
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 73
s Crocidura_indochinensis.CroInd_scaffold_37019               3023 5 -     19598 A--A----G---AA
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 I 88
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28526 5 -     87169 C--A----G---AA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 64
s Ctenodactylus_gundi.CteGun_scaffold_65                    837160 5 +   1526836 G--C----A---GG
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35845 5 +     51376 A--G----A---GG
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            63575 4 +   2246927 ---A----G---GA
i Dasypus_novemcinctus.JH564415.1                        C 0 I 65
s Daubentonia_madagascariensis.ctg71                      12537349 7 -  12879189 GCCA----G---GG
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630161 5 +  20541912 G--A----G---AA
i Desmodus_rotundus.KZ672289.1                           C 0 I 58
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673321 5 +   1390856 G--A----G---AA
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 64
s Diceros_bicornis.DicBicMic_scaffold_5955                    6073 5 +    198055 G--A----G---AA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 64
s Dinomys_branickii.DinBra_scaffold_21862                    36480 5 +     67921 G--G----A---AG
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Echinops_telfairi.JH980293.1                            48780435 5 + 111700974 A--A----G---AG
i Echinops_telfairi.JH980293.1                           C 0 I 243
s Eidolon_helvum.KE759718.1                                  10559 5 +     11740 g--A----G---AA
i Eidolon_helvum.KE759718.1                              C 0 I 63
s Elephantulus_edwardii.JH947257.1                         1097715 1 +  10337057 -------------A
i Elephantulus_edwardii.JH947257.1                       I 4 I 56
s Enhydra_lutris.KZ291758.1                               16329347 5 -  41312741 C--A----G---AA
i Enhydra_lutris.KZ291758.1                              C 0 I 64
s Eptesicus_fuscus.JH977646.1                              2145753 5 -  14770903 G--A----G---AA
i Eptesicus_fuscus.JH977646.1                            C 0 I 63
s Equus_asinus.JREZ01000139.1                              1283579 5 +   4378816 A--A----G---AA
i Equus_asinus.JREZ01000139.1                            C 0 I 60
s Equus_caballus.CM000403.2                               18531400 5 -  39960074 A--A----G---AA
i Equus_caballus.CM000403.2                              C 0 I 59
s Equus_przewalskii.KK951119.1                               33428 5 +    498745 A--A----G---AA
i Equus_przewalskii.KK951119.1                           C 0 I 60
s Erinaceus_europaeus.JH835339.1                           3328277 5 -   7059049 G--A----G---AA
i Erinaceus_europaeus.JH835339.1                         C 0 I 71
s Erythrocebus_patas.Contig38                             21205237 5 -  21539334 g--a----g---aa
i Erythrocebus_patas.Contig38                            T 99 C 0
s Eulemur_albifrons.k141_342033                              13855 7 -     14127 GCCG----G---AG
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6558 7 -     16928 GCCG----G---GG
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15582 7 -     25546 ACCG----G---GG
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12786 7 +     26330 GCCA----G---Gg
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14021 7 +     23973 GCCG----G---GG
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12783 7 +     75513 GCCA----G---Gg
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10713 7 +     97555 GCCG----G---GG
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              204 7 +     13026 GCCG----G---GG
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4257 7 -     17153 GCCG----G---GG
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13830 7 +    111500 GCCG----G---GG
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237006 5 + 206538554 C--A----G---AA
i Felis_catus.CM001381.2                                 C 0 I 48
s Felis_catus_fca126.CM031415.1                           20195849 5 + 205367284 C--A----G---AA
i Felis_catus_fca126.CM031415.1                          C 0 I 48
s Felis_nigripes.FelNig_flattened_line_20823                  9593 5 -     36744 C--A----G---AA
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 48
s Fukomys_damarensis.KN121974.1                             850514 5 +   3816255 g--g----a---gg
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg2040                                     426682 6 -    453645 G--GG---G---GG
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4373 5 +     11339 G--G----G---GG
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            1686 4 +     41679 G--G----G---G-
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1254 5 -      9135 g--g----a---ag
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            31447 5 +     49224 g--a----a---ag
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              16020 5 -     32273 g--a----g---aa
i Gorilla_beringei.k141_3596273                          T 117 C 0
s Gorilla_gorilla.LT578341.1                             186338166 5 + 186649187 g--a----g---aa
i Gorilla_gorilla.LT578341.1                             T 108 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   32688 5 +     78134 G--A----A---AG
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6894 7 -     19426 GCTG----G---GG
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12043 7 -     15286 GCTG----G---GG
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13682 7 +     18253 GCTG----G---GG
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13783 7 -     41752 GCTG----G---GG
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13620 7 -     16460 GCTG----G---GG
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242359 5 +    327341 C--A----G---AA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 64
s Heterocephalus_glaber.JH602082.1                        20662303 5 +  22651954 g--g----a---gg
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                 935 1 +      7595 -------------A
i Heterohyrax_brucei.HetBruBak_scaffold_122365           I 26 I 60
s Hoolock_leuconedys.ctg274                                    434832 5 +    630532 g--a----g---aa
i Hoolock_leuconedys.ctg274                                 T 110 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45053 5 +     55795 C--A----G---AA
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 64
s Hystrix_cristata.HysCri_scaffold_5660                      83192 5 +    135385 G--A----A---GG
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7520973 5 -   7955117 g--a----a---ag
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   22573 7 +     31101 GCCA----G---GG
i Indri_indri.k141_3655594                               C 0 I 1
s Lasiurus_borealis.LasBor_scaffold_32767                    14169 5 -     42476 G--A----G---AA
i Lasiurus_borealis.LasBor_scaffold_32767                I 28 I 2295
s Lemur_catta.scaffold_24                                 15524135 7 -  30322482 GCCG----G---GG
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7498 5 +     64341 g--a----g---aa
i Leontocebus_fuscicollis.k141_1820339                   T 270 C 0
s Leontocebus_illigeri.k141_3350179                           4821 5 +      4941 G--A----G---AA
i Leontocebus_illigeri.k141_3350179                      I 4 C 0
s Leontocebus_nigricollis.k141_4610752                        7539 5 +     35603 g--a----g---aa
i Leontocebus_nigricollis.k141_4610752                   T 257 C 0
s Leontopithecus_chrysomelas.k141_1519602                    29000 5 +     38576 g--a----g---aa
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         25697 5 +     66356 g--a----g---aa
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         11029 7 -     23766 ACCA----G---GG
i Lepilemur_ankaranensis.k141_596936                     C 0 I 1
s Lepilemur_dorsalis.k141_577674                             29090 7 +     45836 ACCA----G---GG
i Lepilemur_dorsalis.k141_577674                         C 0 I 1
s Lepilemur_ruficaudatus.k141_121139                          1630 7 +     25010 GCCA----G---GG
i Lepilemur_ruficaudatus.k141_121139                     C 0 I 1
s Lepilemur_septentrionalis.k141_185316                      27026 7 +     54090 ACCA----G---GG
i Lepilemur_septentrionalis.k141_185316                  C 0 I 1
s Leptonychotes_weddellii.KB714746.1                       3042884 5 +   3914936 C--A----G---AA
i Leptonychotes_weddellii.KB714746.1                     C 0 I 266
s Lepus_americanus.LepAme_scaffold_107385                     6530 5 -     14121 a--a----a---ga
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437186 5 +   1826925 g--a----g---aa
i Lophocebus_aterrimus.ctg367                            T 97 C 0
s Loris_lydekkerianus.k141_2539221                            5930 9 +     11245 G--GGGCAG---GG
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004750 9 +   6120653 G--GGGCAG---GG
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4217364 5 -  43346337 A--A----G---AA
i Loxodonta_africana.GL010049.1                          C 0 I 60
s Lycaon_pictus.CM007581.1                                17955153 5 -  59628241 C--A----G---AA
i Lycaon_pictus.CM007581.1                               C 0 I 63
s Macaca_arctoides.k141_2326796                               6996 5 +     40492 A--a----a---ga
i Macaca_arctoides.k141_2326796                          T 100 I 100
s Macaca_assamensis.Contig5                               59676255 5 +  60120075 A--a----a---ga
i Macaca_assamensis.Contig5                              T 100 I 100
s Macaca_cyclopis.k119_18836                                 12768 5 -     26193 a--a----a---ga
i Macaca_cyclopis.k119_18836                             T 103 I 103
s Macaca_fascicularis.k141_814140                            80552 5 -    114318 a--a----a---ga
i Macaca_fascicularis.k141_814140                        T 103 I 103
s Macaca_fuscata.k119_255327                                  6243 5 -     23192 a--a----a---ga
i Macaca_fuscata.k119_255327                             T 99 I 99
s Macaca_leonina.k141_3550399                                15712 5 -     29190 a--a----a---ga
i Macaca_leonina.k141_3550399                            T 103 I 103
s Macaca_maura.k141_2733130                                  24277 5 +     37952 A--a----a---ga
i Macaca_maura.k141_2733130                              T 103 I 103
s Macaca_mulatta.NC_041758.1                             186839366 5 + 187317192 a--a----a---ga
i Macaca_mulatta.NC_041758.1                             T 103 I 103
s Macaca_nemestrina.KQ007038.1                            25457929 5 -  25927173 a--a----a---ga
i Macaca_nemestrina.KQ007038.1                           T 103 I 103
s Macaca_nigra.k141_1655396                                  80125 5 +     89720 A--a----a---ga
i Macaca_nigra.k141_1655396                              T 103 I 103
s Macaca_radiata.k141_3680011                                 7126 5 +     20474 A--a----a---ga
i Macaca_radiata.k141_3680011                            T 103 I 103
s Macaca_siberu.k141_635500                                   6926 5 -     14993 a--a----a---ga
i Macaca_siberu.k141_635500                              T 103 I 103
s Macaca_silenus.Contig273                                  329792 5 -    668171 a--a----a---ga
i Macaca_silenus.Contig273                               T 103 I 103
s Macaca_thibetana.k99_256239                                 5242 5 -     24072 a--a----a---ga
i Macaca_thibetana.k99_256239                            T 100 I 100
s Macaca_tonkeana.k141_1498238                               25864 5 -     45290 a--a----a---ga
i Macaca_tonkeana.k141_1498238                           T 103 I 103
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90650 5 +     94391 G--A----G---AA
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 65
s Mandrillus_leucophaeus.scaffold280                      23937459 5 -  24302211 g--a----g---aa
i Mandrillus_leucophaeus.scaffold280                     T 99 C 0
s Mandrillus_sphinx.Contig270                               351587 5 +    752769 g--a----g---aa
i Mandrillus_sphinx.Contig270                            T 95 C 0
s Manis_javanica.JSZB01003497.1                              18534 5 +    737560 G--A----G---AA
i Manis_javanica.JSZB01003497.1                          C 0 I 60
s Manis_pentadactyla.KN006162.1                              50523 5 -    317179 G--A----G---AA
i Manis_pentadactyla.KN006162.1                          C 0 I 60
s Marmota_marmota.CZRN01000018.1                          33103173 5 -  40650429 g--a----a---ag
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        10369 5 -    207569 A--A----G---AA
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 54
s Mellivora_capensis.MelCap_flattened_line_69365             10084 5 +     13704 C--A----G---AA
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 64
s Mico_argentatus.k141_1239457                                5776 5 -      7380 g--a----g---aa
i Mico_argentatus.k141_1239457                           T 231 C 0
s Mico_humeralifer.k141_1976199                               4849 5 +     18990 g--a----g---aa
i Mico_humeralifer.k141_1976199                          I 4 C 0
s Mico_schneideri.k141_1950671                                      5788 5 -      7356 g--a----g---aa
i Mico_schneideri.k141_1950671                                 T 231 C 0
s Microcebus_murinus.CM007674.1                           18291555 7 -  93316391 gcaa----g---gg
i Microcebus_murinus.CM007674.1                          C 0 I 1
s Microgale_talazaci.MicTal_scaffold_6613                    22182 5 -    145209 A--A----G---AG
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 244
s Micronycteris_hirsuta.MicHir_scaffold_52381                15686 5 -     19307 C--A----G---AA
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 65
s Miniopterus_natalensis.LDJU01000034.1                    1850646 5 +   8254450 G--A----G---AA
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 63
s Miniopterus_schreibersii.MinSch_scaffold_18080             34327 5 +     64694 G--A----G---AA
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 63
s Miopithecus_ogouensis.k141_534055                           9184 5 -     28506 g--a----g---aa
i Miopithecus_ogouensis.k141_534055                      T 83 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         5752 5 -      8324 C--A----G---AA
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 266
s Mirza_zaza.k141_952172                                      9100 7 -     37649 GCAA----G---GG
i Mirza_zaza.k141_952172                                 C 0 I 1
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141652 5 -    366855 G--A----G---AA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 67
s Mungos_mungo.MunMun_flattened_line_23663                   35458 5 +     37127 C--A----G---AA
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 65
s Murina_feae.MurFea_scaffold_85699                           6850 5 +     14753 G--A----G---AA
i Murina_feae.MurFea_scaffold_85699                      C 0 I 63
s Muscardinus_avellanarius.MusAve_scaffold_82313              5036 5 +     14296 G--A----A---AG
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               301275 5 -  14710649 C--A----G---AA
i Mustela_putorius.JH418006.1                            C 0 I 64
s Myocastor_coypus.MyoCoy_scaffold_10123                     71324 5 -     80779 A--G----A---GG
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                280493 5 -  10118263 G--A----G---AG
i Myotis_brandtii.KE162005.1                             C 0 I 63
s Myotis_davidii.KB100139.1                                1587755 5 -   6019432 G--A----G---AA
i Myotis_davidii.KB100139.1                              C 0 I 63
s Myotis_lucifugus.GL429869.1                              3903847 5 -   4330536 G--A----G---AA
i Myotis_lucifugus.GL429869.1                            C 0 I 63
s Myotis_myotis.MyoMyo_scaffold_482318                         521 5 -       721 G--A----G---AA
i Myotis_myotis.MyoMyo_scaffold_482318                   C 0 n 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189297 5 +    196477 A--A----G---GA
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 I 65
s Nasalis_larvatus.k141_413338                               15159 5 +     21681 g--a----g---aa
i Nasalis_larvatus.k141_413338                           T 107 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20307231 5 +  31847680 C--A----G---AA
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 373
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149415 5 -   9404916 c--a----a---aa
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 80
s Nycticebus_bengalensis.LG01                            102586295 8 - 196305487 G--G----TGGTGG
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              219 8 +      2075 G--G----TGGTGG
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761649 8 + 199412804 G--G----GGGCGG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1363556 5 +   3988456 a--g----a---ga
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  746934 5 +  11899542 a--g----a---gg
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                              506691 5 -   2017862 C--A----G---AA
i Odobenus_rosmarus.KB229312.1                           C 0 I 63
s Orycteropus_afer.OryAfe_flattened_line_144387               9882 5 -     18566 A--A----T---AA
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 I 60
s Oryctolagus_cuniculus.CM000791.1                        67147409 5 + 174332312 a--a----a---ga
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462383 2 -    559221 ------------AA
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 63
s Otolemur_crassicaudatus.k141_222918                         4214 3 +      8798 --------G---GG
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696377 3 -   1103335 --------G---GG
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    44113 5 +     80009 g--a----g---aa
i Pan_paniscus.KQ411613.1                                T 113 C 0
s Pan_troglodytes.NBAG03001836.1                             30038 5 +     51860 g--a----g---aa
i Pan_troglodytes.NBAG03001836.1                         I 4 I 6
s Panthera_onca.PanOnc_flattened_line_3271                  151208 5 +    230217 C--A----G---AA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 48
s Panthera_pardus.KV860321.1                                264417 5 +  18783137 C--A----G---AA
i Panthera_pardus.KV860321.1                             C 0 I 48
s Panthera_tigris.KE722367.1                               4721296 5 -   8748460 C--A----G---AA
i Panthera_tigris.KE722367.1                             C 0 I 48
s Papio_anubis.CM001495.2                                183443209 5 + 183742232 g--a----g---aa
i Papio_anubis.CM001495.2                                T 151 C 0
s Papio_cynocephalus.k141_4307930                             6907 5 +     20448 g--a----g---aa
i Papio_cynocephalus.k141_4307930                        T 99 C 0
s Papio_hamadryas.Contig39                                20563715 5 +  20919399 g--a----g---aa
i Papio_hamadryas.Contig39                               T 103 C 0
s Papio_kindae.k141_1936966                                   5651 5 +     41871 g--a----g---aa
i Papio_kindae.k141_1936966                              T 99 C 0
s Papio_papio.k141_802527                                     8936 5 +     27711 g--a----g---aa
i Papio_papio.k141_802527                                T 107 C 0
s Papio_ursinus.k141_3428135                                  9017 5 +      9205 g--a----g---aa
i Papio_ursinus.k141_3428135                             T 95 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12690 5 -     78924 C--A----G---AA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 63
s Perodicticus_ibeanus.k141_855320                           10184 7 +     13100 G--GG--AG---GG
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8590 7 +     25941 G--GG--AG---GG
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28205 5 -     29689 T--G----A---GG
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Piliocolobus_badius.k141_1234363                           43670 5 +     62158 g--a----g---ag
i Piliocolobus_badius.k141_1234363                       T 87 C 0
s Piliocolobus_gordonorum.k141_381342                        38401 5 +     89929 g--a----g---ag
i Piliocolobus_gordonorum.k141_381342                    T 103 C 0
s Piliocolobus_kirkii.k141_448987                            39817 5 +     51399 g--a----g---ag
i Piliocolobus_kirkii.k141_448987                        T 103 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296055 5 -  14605196 g--a----g---ag
i Piliocolobus_tephrosceles.PDMG02000141.1               T 103 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1791 5 +     22620 G--A----G---AA
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 63
s Pongo_abelii.CM009266.2                                189131155 5 + 189387572 g--a----g---aa
i Pongo_abelii.CM009266.2                                T 109 C 0
s Pongo_pygmaeus.ctg66                                     9570763 5 +   9816681 g--a----g---aa
i Pongo_pygmaeus.ctg66                                   T 108 C 0
s Presbytis_comata.k141_677006                               73339 5 -     81375 g--g----g---aa
i Presbytis_comata.k141_677006                           T 103 C 0
s Presbytis_mitrata.k141_1087752                              5159 5 +     19060 G--g----g---aa
i Presbytis_mitrata.k141_1087752                         T 103 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 13390 1 -     22811 -------------A
i Procavia_capensis.ProCapCap_scaffold_85530             I 26 I 60
s Prolemur_simus.MPIZ01000396.1                            2596815 7 -   4620579 gctg----g---gg
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990796 7 +   2598838 gcca----g---gg
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 1
s Propithecus_coronatus.k141_347390                          29108 7 +     38485 GCCA----G---GG
i Propithecus_coronatus.k141_347390                      C 0 I 1
s Propithecus_diadema.k141_58108                              1151 7 -     13098 GCCA----G---GG
i Propithecus_diadema.k141_58108                         C 0 I 1
s Propithecus_edwardsi.k141_1176054                          26629 7 +     35766 GCCA----G---GG
i Propithecus_edwardsi.k141_1176054                      C 0 I 1
s Propithecus_perrieri.k141_1200571                           4816 7 -     24134 GCCA----G---GG
i Propithecus_perrieri.k141_1200571                      C 0 I 1
s Propithecus_tattersalli.k141_790011                        28641 7 -     67325 GCCA----G---GG
i Propithecus_tattersalli.k141_790011                    C 0 I 1
s Propithecus_verreauxi.k141_956661                           4864 7 -      6182 GCCA----G---GG
i Propithecus_verreauxi.k141_956661                      C 0 I 1
s Pteronotus_parnellii.KE909381.1                            15106 5 -     21811 G--A----G---AA
i Pteronotus_parnellii.KE909381.1                        C 0 I 67
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40274 5 +     42204 C--A----G---AA
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 64
s Pteropus_alecto.KB030862.1                              22976818 5 +  28871421 G--A----G---AA
i Pteropus_alecto.KB030862.1                             C 0 I 63
s Pteropus_vampyrus.KN534172.1                                6871 5 -      8028 G--A----G---AA
i Pteropus_vampyrus.KN534172.1                           C 0 I 63
s Puma_concolor.QAVW01001104.1                            20274362 5 -  38429054 C--A----G---AA
i Puma_concolor.QAVW01001104.1                           C 0 I 48
s Pygathrix_cinerea.k141_1153803                             15168 5 -     91421 g--a----g---aa
i Pygathrix_cinerea.k141_1153803                         T 107 C 0
s Pygathrix_nigripes_b.ctg100                                 7609288 5 +   7812017 g--a----g---aa
i Pygathrix_nigripes_b.ctg100                               T 107 C 0
s Pygathrix_nigripes_a.k141_215492                             15140 5 -     72585 g--a----g---aa
i Pygathrix_nigripes_a.k141_215492                         T 107 C 0
s Rhinopithecus_bieti.k119_217274                             6854 5 -     11128 g--a----g---aa
i Rhinopithecus_bieti.k119_217274                        T 106 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236207 5 - 195417433 g--a----g---aa
i Rhinopithecus_roxellana.NC_044550.1                    T 100 C 0
s Rhinopithecus_strykeri.ctg102                            7671859 5 +   7961872 g--a----g---aa
i Rhinopithecus_strykeri.ctg102                          T 106 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87839 5 -     96226 G--A----G---AA
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 64
s Saguinus_bicolor.k141_2619299                               8175 5 -      8359 g--a----c---aa
i Saguinus_bicolor.k141_2619299                          I 4 I 6
s Saguinus_imperator.k141_2524406                             2133 5 +      2197 g--a----g---aa
i Saguinus_imperator.k141_2524406                        I 4 C 0
s Saguinus_inustus.k141_699149                               13552 5 +     13640 g--a----g---aa
i Saguinus_inustus.k141_699149                           I 4 C 0
s Saguinus_labiatus.k141_285685                               8421 5 +      8564 g--a----g---aa
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469271 5 + 209938924 g--a----c---aa
i Saguinus_midas.LG03                                    T 464 C 0
s Saguinus_mystax.k141_374627                                 7977 5 -      9399 g--a----g---aa
i Saguinus_mystax.k141_374627                            T 191 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951112 5 - 121099817 a--g----a---ta
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23451 5 +     46362 a--g----a---ta
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               23546 5 +     45824 a--g----a---ta
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             40225 5 -     64574 a--g----a---ta
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               3297 5 -     23631 a--g----a---ta
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 23446 1 -     61129 -------------a
i Saimiri_ustus.k141_1484609                             I 113 C 0
s Sapajus_apella.ctg103                                    5420659 5 -   5703754 g--a----g---aa
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          55700 5 -     80660 g--a----g---aa
i Sapajus_macrocephalus.k141_351809                      T 353 I 353
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153252 5 -    313613 T--A----G---AA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 71
s Semnopithecus_entellus.k141_11662                          19679 5 -     19888 G--A----G---AA
i Semnopithecus_entellus.k141_11662                      I 4 I 4
s Semnopithecus_hypoleucos.k141_1615806                      26882 5 +     39453 g--a----g---aa
i Semnopithecus_hypoleucos.k141_1615806                  T 107 C 0
s Semnopithecus_johnii.k141_670120                            7401 5 +     27826 g--a----g---aa
i Semnopithecus_johnii.k141_670120                       T 106 C 0
s Semnopithecus_priam.k141_638794                             6922 5 -     19483 g--a----g---aa
i Semnopithecus_priam.k141_638794                        T 107 C 0
s Semnopithecus_schistaceus.k141_1584426                      6990 5 +      7198 G--A----G---AA
i Semnopithecus_schistaceus.k141_1584426                 I 4 I 4
s Semnopithecus_vetulus.k141_1200928                         15248 5 +     15514 g--a----g---aa
i Semnopithecus_vetulus.k141_1200928                     I 4 I 6
s Solenodon_paradoxus.SolPar_flattened_line_126               3809 5 +   1910179 G--A----A---AA
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 63
s Sorex_araneus.JH798187.1                                13651051 5 -  18376816 A--A----A---AG
i Sorex_araneus.JH798187.1                               C 0 I 93
s Spermophilus_dauricus.KZ294078.1                         1954028 5 -   3870691 g--a----a---ag
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30775 5 +     97271 C--A----G---AA
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 65
s Suricata_suricatta.SurSur_flattened_line_6629              18358 5 -    196729 C--A----G---AA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 68
s Sus_scrofa.CM000828.4                                    6810534 5 +  69701581 A--A----G---AA
i Sus_scrofa.CM000828.4                                  C 0 I 329
s Tadarida_brasiliensis.TadBra_scaffold_25820                10835 5 +     41958 G--A----G---AA
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 60
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72658 5 +    116680 A--A----G---GA
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 I 65
s Tapirus_indicus.TapInd_scaffold_9301                      118789 5 -    156842 G--T----G---AA
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 64
s Tapirus_terrestris.TapTer_scaffold_755                    387246 5 +    539355 G--C----A---AA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 64
s Tarsius_lariang.k141_2201908                               26430 5 +     70052 g--g----a---ag
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1263 5 -     16117 G--G----A---ag
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428579 5 + 186847797 g--a----g---aa
i Theropithecus_gelada.CM009954.1                        T 99 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105525 5 +    114563 T--G----A---GG
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   6441 4 +      8208 ---G----G---AA
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 I 65
s Tonatia_saurophila.TonSau_scaffold_294                     81228 5 +    610378 G--A----G---AA
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 64
s Trachypithecus_auratus.k141_722599                         10973 5 -     20410 g--a----g---aa
i Trachypithecus_auratus.k141_722599                     T 107 C 0
s Trachypithecus_crepusculus.k141_582567                        87 5 -     12674 g--a----g---aa
i Trachypithecus_crepusculus.k141_582567                 T 107 C 0
s Trachypithecus_cristatus.k141_580354                       11074 5 +     19930 g--a----g---aa
i Trachypithecus_cristatus.k141_580354                   T 107 C 0
s Trachypithecus_francoisi.k141_1412647                       7501 5 -     19997 g--a----g---aa
i Trachypithecus_francoisi.k141_1412647                  T 91 C 0
s Trachypithecus_geei.k141_277701                            47625 5 -     60166 g--a----g---aa
i Trachypithecus_geei.k141_277701                        T 106 C 0
s Trachypithecus_germaini.k141_912491                        15096 5 -     27529 g--a----g---aa
i Trachypithecus_germaini.k141_912491                    T 107 C 0
s Trachypithecus_hatinhensis.k141_143409                     15040 5 -     18194 g--a----g---aa
i Trachypithecus_hatinhensis.k141_143409                 T 107 C 0
s Trachypithecus_laotum.k141_907409                           8768 5 -     21137 g--a----g---aa
i Trachypithecus_laotum.k141_907409                      T 91 C 0
s Trachypithecus_leucocephalus.k141_587342                    7471 5 -     10723 g--a----g---aa
i Trachypithecus_leucocephalus.k141_587342               T 91 C 0
s Trachypithecus_melamera.k141_434728                         6627 5 +      9834 g--a----g---aa
i Trachypithecus_melamera.k141_434728                    T 107 C 0
s Trachypithecus_obscurus.k141_190785                        24940 5 +     32220 g--a----g---aa
i Trachypithecus_obscurus.k141_190785                    T 107 C 0
s Trachypithecus_phayrei.ctg124                            5939042 5 +   6242583 g--a----g---aa
i Trachypithecus_phayrei.ctg124                          T 107 C 0
s Trachypithecus_pileatus.k141_2007326                        8294 5 +     20839 g--a----g---aa
i Trachypithecus_pileatus.k141_2007326                   T 106 C 0
s Trichechus_manatus.JH594705.1                            4293289 1 +  10818551 -------------A
i Trichechus_manatus.JH594705.1                          I 26 I 60
s Tupaia_chinensis.KB320699.1                              2155685 5 +   4065304 G--T----a---tg
i Tupaia_chinensis.KB320699.1                            T 215 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9340 3 -     10553 --------A---AG
i Tupaia_tana.TupTan_flattened_line_97126                I 18 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   53357 5 -     77625 T--A----A---AA
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 63
s Ursus_maritimus.KK499267.1                               4850475 5 -   5085361 T--A----G---AA
i Ursus_maritimus.KK499267.1                             C 0 I 63
s Varecia_rubra.k141_590885                                  11475 7 +     50397 GCTG----G---GG
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11534 7 +     24756 GCTG----G---GG
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371914 3 -   5488506 --------G---AA
i Vicugna_pacos.KN270157.1                               I 25 I 68
s Vulpes_lagopus.VulLag_flattened_line_30954                 10828 5 -     43706 C--A----G---AA
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 63
s Xerus_inauris.XerIna_scaffold_2302                          1168 5 +    224448 g--g----a---gg
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          5404 5 +     86975 C--A----G---AA
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 63
e Mus_pahari.LT608297.1                                   31355125 13 -  89631738 T
e Mus_spretus.CM004101.1                                  90752527 13 - 130317789 T
e Mus_musculus.chr8                                       87650466 13 - 129401213 T
e Mus_caroli.LT608237.1                                   84361468 13 - 120012414 T
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      14994 0 +     63895 C
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sigmodon_hispidus.SigHis_scaffold_60841                    11982 13 -     12148 T
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570728 13 +  90668790 T
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Psammomys_obesus.NESX01036370.1                            10498 13 -     21651 T
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Peromyscus_maniculatus.KI615324.1                       18194880 13 -  18517816 T
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80254 13 +    102263 T
e Ondatra_zibethicus.OndZib_scaffold_46174                   25254 13 +     28053 T
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Nannospalax_galili.KL204047.1                            2034165 0 -   3037898 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11260586 13 -  27267610 T
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182348 13 -  29670104 T
e Meriones_unguiculatus.MerUng_scaffold_7390                 32854 13 +    140813 T
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276898 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Ellobius_talpinus.LOJH01081419.1                             538 13 +      8657 T
e Ellobius_lutescens.LOEQ01008920.1                          20407 13 -    110024 T
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cricetulus_griseus.LT883664.1                           11667673 13 + 224834208 T
e Cricetomys_gambianus.CriGam_scaffold_18520                 50293 0 +     63868 C
e Colobus_guereza.LG01                                   199948999 41 + 200372422 T
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74597 0 -     89534 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     70906 13 +     87051 T

a score=0.000000
s hg38.chrUn_KI270753v1                                       6887  3 +     62944 a--a------------------------------a
s Acinonyx_jubatus.LLWD01001279.1                           827408  3 -   1699592 a--a------------------------------a
i Acinonyx_jubatus.LLWD01001279.1                        I 48 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510682  3 -  29979442 a--a------------------------------a
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 63 C 0
s Ailurus_fulgens.LNAC01001112.1                             79458  3 -    347723 a--a------------------------------a
i Ailurus_fulgens.LNAC01001112.1                         I 64 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14699  3 -     52922 a--a------------------------------a
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         14635  3 -     28001 a--a------------------------------a
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          5131  3 -     18505 a--a------------------------------a
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           5985  3 -     12518 a--a------------------------------a
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              7647 16 +     51355 a--a-----------------atgaaggagaaaga
i Alouatta_belzebul.k141_3560514                         I 184 T 197
s Alouatta_caraya.k141_1701091                                 755 16 -     36483 a--a-----------------atgaaggagaaaga
i Alouatta_caraya.k141_1701091                           I 170 T 183
s Alouatta_discolor.k141_566626                              11207 16 +     28687 a--a-----------------atgaaggagaaaga
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1509701                                25031 16 +     25266 a--a-----------------atgaaggagaaaga
i Alouatta_juara.k141_1509701                            I 181 T 194
s Alouatta_macconnelli.k141_918386                             752 16 -      9457 a--a-----------------atgaaggagaaaga
i Alouatta_macconnelli.k141_918386                       I 173 T 186
s Alouatta_nigerrima.k141_3472759                            18338 16 -     18578 a--a-----------------atgaaggagaaaga
i Alouatta_nigerrima.k141_3472759                        I 181 T 194
s Alouatta_palliata.k141_2135620                              3722 16 +     47717 a--a-----------------atgaaggagaaaga
i Alouatta_palliata.k141_2135620                         I 178 T 191
s Alouatta_puruensis.k141_362188                               434 16 +      5663 a--a-----------------atgaaggagaaaga
i Alouatta_puruensis.k141_362188                         I 185 T 198
s Alouatta_seniculus.k141_117119                             14869 33 +     50774 G--GAGAAAGCGACAGATGAAATGAAGGAGAAATA
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185450  3 +    412891 T--A------------------------------A
i Anoura_caudifer.AnoCau_scaffold_1412                   I 64 C 0
s Aotus_azarae.k141_3104676                                  15486  3 -     33861 a--a------------------------------a
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            15506  3 -     34016 a--a------------------------------a
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297903  3 -   5030052 a--a------------------------------a
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             15508  3 -     34685 a--a------------------------------a
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28632  3 -     47192 a--a------------------------------a
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      12705  1 +     20879 G----------------------------------
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 8
s Arctocebus_calabarensis.k141_2318572                       11556  1 +     14667 C----------------------------------
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4858  3 +     43469 G--A------------------------------A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 63 C 0
s Avahi_laniger.k141_765380                                  53760  3 -     92717 G--A------------------------------G
i Avahi_laniger.k141_765380                              I 1 C 0
s Avahi_peyrierasi.k141_1424874                              54387  3 +     85213 G--A------------------------------G
i Avahi_peyrierasi.k141_1424874                          I 1 C 0
s Callibella_humilis.k141_1278103                             5241  3 -     10423 a--a------------------------------a
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             24712  3 +     31915 a--a------------------------------a
i Callimico_goeldii.k141_1091182                         C 0 I 263
s Callithrix_geoffroyi.k119_512088                            5207  3 +      5267 a--a------------------------------a
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590421  3 - 189096842 a--a------------------------------a
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             11952  3 -     12001 A--A------------------------------A
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002485  3 -  17673402 a--a------------------------------a
i Camelus_bactrianus.KN276810.1                          I 68 C 0
s Camelus_dromedarius.KN272107.1                           2334943  3 -   7040546 a--a------------------------------a
i Camelus_dromedarius.KN272107.1                         I 68 C 0
s Camelus_ferus.KB017975.1                                  403226  3 -   1652518 a--a------------------------------a
i Camelus_ferus.KB017975.1                               I 68 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    185330  3 -    185531 A--A------------------------------A
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 I 63 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034716  3 -   9314153 a--a------------------------------a
i Canis_lupus_dingo.QKWQ01000480.1                       I 63 C 0
s Canis_lupus_familiaris.chr16                            17958981  3 -  59632846 a--a------------------------------a
i Canis_lupus_familiaris.chr16                           I 63 C 0
s Canis_lupus_orion.HG994398.1                            18500493  3 +  63665305 a--a------------------------------a
i Canis_lupus_orion.HG994398.1                           I 63 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1143  3 -     12242 G--G------------------------------T
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007247396.1                           201428  3 +    308752 g--a------------------------------a
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5212  3 -     11696 T--A------------------------------A
i Carollia_perspicillata.CarPer_scaffold_92756           I 59 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137160  3 +    179628 A--G------------------------------G
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     93121  3 +    217609 T--A------------------------------A
i Catagonus_wagneri.CatWag_scaffold_2839                 I 74 I 1
s Cebuella_niveiventris.k141_1251222                          9866  3 -     11392 a--a------------------------------a
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               5964  3 -      7577 a--a------------------------------a
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25651992  3 +  26074798 a--a------------------------------a
i Cebus_albifrons.Contig27                               T 434 I 434
s Cebus_olivaceus.k141_1764483                                 804  6 +     28840 a--a---------------------------atga
i Cebus_olivaceus.k141_1764483                           I 5 I 9
s Cebus_unicolor.k141_544048                                 49905  3 -     74725 a--a------------------------------a
i Cebus_unicolor.k141_544048                             I 1 I 1
s Cephalopachus_bancanus.k141_1423433                         5433  3 +     31688 g--a------------------------------a
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12231539  3 +  27778364 A--A------------------------------A
i Ceratotherium_simum.JH767749.1                         I 64 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2566  3 -     25243 A--A------------------------------A
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 64 C 0
s Cercocebus_atys.KQ010504.1                               4475644  3 +   4669795 a--a------------------------------a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        14189  3 -     19203 a--a------------------------------a
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3342297                            805  3 -     14043 a--a------------------------------a
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           8841  3 +     27781 a--a------------------------------a
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         9006  3 -     20310 a--a------------------------------a
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          11985  3 +     29689 a--a------------------------------a
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            6739  3 -     20078 a--a------------------------------a
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          14662  3 -     27936 a--a------------------------------a
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            3526  3 -     17152 a--a------------------------------a
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38817065  3 +  39242232 a--a------------------------------a
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222757  3 -  21565898 a--a------------------------------a
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       39875  3 -     53127 a--a------------------------------a
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                         126  3 +     13442 a--a------------------------------a
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14675  3 -     27947 a--a------------------------------a
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         14651  3 +     17596 a--a------------------------------a
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                           698  3 +     14005 a--a------------------------------a
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             637  3 -      8501 A--A------------------------------A
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       I 65 C 0
s Cheirogaleus_major.k141_333249                             21140  3 -     52598 G--A------------------------------G
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16505  3 +     57038 g--a------------------------------g
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1252891  3 +   2543920 g--g------------------------------t
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2206961                            395  3 -     15524 a--a------------------------------a
i Chiropotes_albinasus.k141_2206961                      I 232 T 222
s Chlorocebus_aethiops.ctg25                              18428635  3 -  18827391 a--a------------------------------a
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15072  3 -     50209 a--a------------------------------a
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422072  3 + 135778131 a--a------------------------------a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 18417  3 +     19366 A--A------------------------------A
i Choloepus_didactylus.ChoDid_scaffold_45914             I 65 C 0
s Choloepus_hoffmanni.KN194906.1                            173493  3 +    839153 a--a------------------------------a
i Choloepus_hoffmanni.KN194906.1                         I 65 C 0
s Colobus_angolensis.KN981557.1                            1910577  3 +   2368649 a--a------------------------------a
i Colobus_angolensis.KN981557.1                          C 0 I 103
s Colobus_polykomos.k141_906115                              37111  3 +     84244 a--a------------------------------a
i Colobus_polykomos.k141_906115                          C 0 I 103
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14515  3 -     20389 A--G------------------------------A
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 73 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28595  3 -     87169 A--A------------------------------A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 64 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837165  3 +   1526836 A--C------------------------------T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35850  3 +     51376 G--A------------------------------C
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            63644  3 +   2246927 a--a------------------------------a
i Dasypus_novemcinctus.JH564415.1                        I 65 C 0
s Daubentonia_madagascariensis.ctg71                      12537356  3 -  12879189 G--A------------------------------G
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630224  3 +  20541912 t--a------------------------------a
i Desmodus_rotundus.KZ672289.1                           I 58 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673390  3 +   1390856 A--A------------------------------a
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 64 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6142  3 +    198055 A--A------------------------------A
i Diceros_bicornis.DicBicMic_scaffold_5955               I 64 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36485  3 +     67921 G--G------------------------------T
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Echinops_telfairi.JH980293.1                            48780683  5 + 111700974 a--t----------------------------ttt
i Echinops_telfairi.JH980293.1                           I 243 C 0
s Eidolon_helvum.KE759718.1                                  10627  3 +     11740 a--a------------------------------a
i Eidolon_helvum.KE759718.1                              I 63 C 0
s Elephantulus_edwardii.JH947257.1                         1097772  4 +  10337057 a--g-----------------------------ta
i Elephantulus_edwardii.JH947257.1                       I 56 C 0
s Enhydra_lutris.KZ291758.1                               16329416  3 -  41312741 a--a------------------------------a
i Enhydra_lutris.KZ291758.1                              I 64 C 0
s Eptesicus_fuscus.JH977646.1                              2145821  3 -  14770903 a--a------------------------------a
i Eptesicus_fuscus.JH977646.1                            I 63 C 0
s Equus_asinus.JREZ01000139.1                              1283644  3 +   4378816 a--t------------------------------a
i Equus_asinus.JREZ01000139.1                            I 60 C 0
s Equus_caballus.CM000403.2                               18531464  3 -  39960074 a--t------------------------------a
i Equus_caballus.CM000403.2                              I 59 C 0
s Equus_przewalskii.KK951119.1                               33493  3 +    498745 a--t------------------------------a
i Equus_przewalskii.KK951119.1                           I 60 C 0
s Erythrocebus_patas.Contig38                             21205242  3 -  21539334 a--a------------------------------a
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13862  3 -     14127 A--A------------------------------G
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6565  3 -     16928 A--A------------------------------G
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15589  3 -     25546 A--A------------------------------G
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12793  3 +     26330 a--a------------------------------g
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14028  3 +     23973 A--A------------------------------G
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12790  3 +     75513 a--a------------------------------g
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10720  3 +     97555 a--a------------------------------g
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              211  3 +     13026 a--a------------------------------g
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4264  3 -     17153 A--A------------------------------G
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13837  3 +    111500 A--A------------------------------G
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237059  3 + 206538554 a--a------------------------------a
i Felis_catus.CM001381.2                                 I 48 C 0
s Felis_catus_fca126.CM031415.1                           20195902  3 + 205367284 a--a------------------------------a
i Felis_catus_fca126.CM031415.1                          I 48 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  9646  3 -     36744 A--A------------------------------A
i Felis_nigripes.FelNig_flattened_line_20823             I 48 C 0
s Fukomys_damarensis.KN121974.1                             850519  3 +   3816255 a--g------------------------------t
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg2040                                     426688  3 -    453645 G--G------------------------------G
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4378  3 +     11339 G--G------------------------------G
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            1690  3 +     41679 G--G------------------------------G
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1259  3 -      9135 g--a------------------------------a
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            31452  5 +     49224 gaaa------------------------------T
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              16025  3 -     32273 a--a------------------------------a
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186338171  3 + 186649187 a--a------------------------------a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   32693  5 +     78134 GAAA------------------------------T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6901  3 -     19426 A--A------------------------------G
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12050  3 -     15286 A--A------------------------------G
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13689  3 +     18253 a--a------------------------------g
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13790  3 -     41752 A--A------------------------------G
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13627  3 -     16460 A--A------------------------------G
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242428  3 +    327341 A--A------------------------------A
i Helogale_parvula.HelPar_flattened_line_2585            I 64 C 0
s Heterocephalus_glaber.JH602082.1                        20662308  3 +  22651954 a--g------------------------------t
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                 996  3 +      7595 T--T------------------------------T
i Heterohyrax_brucei.HetBruBak_scaffold_122365           I 60 C 0
s Hoolock_leuconedys.ctg274                                    434837  3 +    630532 a--a------------------------------a
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45122  3 +     55795 A--A------------------------------A
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 64 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83197  3 +    135385 G--G------------------------------T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7520978  3 -   7955117 a--a------------------------------g
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   22581  3 +     31101 g--a------------------------------g
i Indri_indri.k141_3655594                               I 1 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    16469  3 -     42476 A--A------------------------------A
i Lasiurus_borealis.LasBor_scaffold_32767                I 2295 C 0
s Lemur_catta.scaffold_24                                 15524142  3 -  30322482 A--A------------------------------G
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7503  3 +     64341 a--a------------------------------a
i Leontocebus_fuscicollis.k141_1820339                   C 0 I 279
s Leontocebus_illigeri.k141_3350179                           4826  3 +      4941 A--A------------------------------A
i Leontocebus_illigeri.k141_3350179                      C 0 I 3
s Leontocebus_nigricollis.k141_4610752                        7544  3 +     35603 a--a------------------------------a
i Leontocebus_nigricollis.k141_4610752                   C 0 I 266
s Leontopithecus_chrysomelas.k141_1519602                    29005  3 +     38576 a--a------------------------------a
i Leontopithecus_chrysomelas.k141_1519602                C 0 I 221
s Leontopithecus_rosalia.k141_464620                         25702  3 +     66356 a--a------------------------------a
i Leontopithecus_rosalia.k141_464620                     C 0 I 224
s Lepilemur_ankaranensis.k141_596936                         11037  2 -     23766 ---A------------------------------G
i Lepilemur_ankaranensis.k141_596936                     I 1 C 0
s Lepilemur_dorsalis.k141_577674                             29098  2 +     45836 ---A------------------------------G
i Lepilemur_dorsalis.k141_577674                         I 1 C 0
s Lepilemur_ruficaudatus.k141_121139                          1638  2 +     25010 ---A------------------------------G
i Lepilemur_ruficaudatus.k141_121139                     I 1 C 0
s Lepilemur_septentrionalis.k141_185316                      27034  2 +     54090 ---A------------------------------G
i Lepilemur_septentrionalis.k141_185316                  I 1 C 0
s Leptonychotes_weddellii.KB714746.1                       3043155  3 +   3914936 a--a------------------------------a
i Leptonychotes_weddellii.KB714746.1                     I 266 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6535  2 -     14121 g--g-------------------------------
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 1
s Lophocebus_aterrimus.ctg367                              1437191  3 +   1826925 a--a------------------------------a
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5939  1 +     11245 G----------------------------------
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004759  1 +   6120653 G----------------------------------
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4217429  3 -  43346337 a--a------------------------------t
i Loxodonta_africana.GL010049.1                          I 60 C 0
s Lycaon_pictus.CM007581.1                                17955221  3 -  59628241 a--a------------------------------a
i Lycaon_pictus.CM007581.1                               I 63 C 0
s Macaca_arctoides.k141_2326796                               7101  3 +     40492 a--a------------------------------a
i Macaca_arctoides.k141_2326796                          I 100 T 100
s Macaca_assamensis.Contig5                               59676360  3 +  60120075 a--a------------------------------a
i Macaca_assamensis.Contig5                              I 100 T 100
s Macaca_cyclopis.k119_18836                                 12876  3 -     26193 a--a------------------------------a
i Macaca_cyclopis.k119_18836                             I 103 T 103
s Macaca_fascicularis.k141_814140                            80660  3 -    114318 a--a------------------------------a
i Macaca_fascicularis.k141_814140                        I 103 T 103
s Macaca_fuscata.k119_255327                                  6347  3 -     23192 a--a------------------------------a
i Macaca_fuscata.k119_255327                             I 99 T 99
s Macaca_leonina.k141_3550399                                15820  3 -     29190 a--a------------------------------a
i Macaca_leonina.k141_3550399                            I 103 T 103
s Macaca_maura.k141_2733130                                  24385  3 +     37952 a--a------------------------------a
i Macaca_maura.k141_2733130                              I 103 T 103
s Macaca_mulatta.NC_041758.1                             186839474  3 + 187317192 a--a------------------------------a
i Macaca_mulatta.NC_041758.1                             I 103 T 103
s Macaca_nemestrina.KQ007038.1                            25458037  3 -  25927173 a--a------------------------------a
i Macaca_nemestrina.KQ007038.1                           I 103 T 103
s Macaca_nigra.k141_1655396                                  80233  3 +     89720 a--a------------------------------a
i Macaca_nigra.k141_1655396                              I 103 T 103
s Macaca_radiata.k141_3680011                                 7234  3 +     20474 a--a------------------------------a
i Macaca_radiata.k141_3680011                            I 103 T 103
s Macaca_siberu.k141_635500                                   7034  3 -     14993 a--a------------------------------a
i Macaca_siberu.k141_635500                              I 103 T 103
s Macaca_silenus.Contig273                                  329900  3 -    668171 a--a------------------------------a
i Macaca_silenus.Contig273                               I 103 T 103
s Macaca_thibetana.k99_256239                                 5347  3 -     24072 a--a------------------------------a
i Macaca_thibetana.k99_256239                            I 100 T 100
s Macaca_tonkeana.k141_1498238                               25972  3 -     45290 a--a------------------------------a
i Macaca_tonkeana.k141_1498238                           I 103 T 103
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90720  3 +     94391 A--A------------------------------A
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 65 C 0
s Mandrillus_leucophaeus.scaffold280                      23937464  3 -  24302211 a--a------------------------------a
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               351592  3 +    752769 a--a------------------------------a
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              18599  3 +    737560 a--a------------------------------a
i Manis_javanica.JSZB01003497.1                          I 60 C 0
s Manis_pentadactyla.KN006162.1                              50588  3 -    317179 a--a------------------------------a
i Manis_pentadactyla.KN006162.1                          I 60 C 0
s Marmota_marmota.CZRN01000018.1                          33103178  3 -  40650429 a--a------------------------------g
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        10428  3 -    207569 A--A------------------------------A
i Megaderma_lyra.MegLyr_scaffold_4542                    I 54 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10153  3 +     13704 A--A------------------------------A
i Mellivora_capensis.MelCap_flattened_line_69365         I 64 C 0
s Mico_argentatus.k141_1239457                                5781  3 -      7380 a--a------------------------------a
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               4854  3 +     18990 a--a------------------------------a
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      5793  3 -      7356 a--a------------------------------a
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18291563  3 -  93316391 g--a------------------------------g
i Microcebus_murinus.CM007674.1                          I 1 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    22431  6 -    145209 A--T-------------T----T----------TT
i Microgale_talazaci.MicTal_scaffold_6613                I 244 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                15756  3 -     19307 T--A------------------------------A
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 65 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850714  3 +   8254450 a--a------------------------------a
i Miniopterus_natalensis.LDJU01000034.1                  I 63 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34395  3 +     64694 A--A------------------------------A
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 63 C 0
s Miopithecus_ogouensis.k141_534055                           9189  3 -     28506 a--a------------------------------a
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6023  3 -      8324 A--A------------------------------A
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 266 C 0
s Mirza_zaza.k141_952172                                      9108  3 -     37649 G--A------------------------------G
i Mirza_zaza.k141_952172                                 I 1 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141724  2 -    366855 A--A-------------------------------
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 67 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35528  3 +     37127 A--A------------------------------A
i Mungos_mungo.MunMun_flattened_line_23663               I 65 C 0
s Murina_feae.MurFea_scaffold_85699                           6918  3 +     14753 A--A------------------------------A
i Murina_feae.MurFea_scaffold_85699                      I 63 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              5041  5 +     14296 GACA------------------------------T
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               301344  3 -  14710649 a--a------------------------------a
i Mustela_putorius.JH418006.1                            I 64 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71329  3 -     80779 G--A------------------------------T
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                280561  3 -  10118263 a--a------------------------------a
i Myotis_brandtii.KE162005.1                             I 63 C 0
s Myotis_davidii.KB100139.1                                1587823  3 -   6019432 a--a------------------------------a
i Myotis_davidii.KB100139.1                              I 63 C 0
s Myotis_lucifugus.GL429869.1                              3903915  3 -   4330536 a--a------------------------------a
i Myotis_lucifugus.GL429869.1                            I 63 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                          67  3 +      1835 A--A------------------------------A
i Myotis_myotis.MyoMyo_scaffold_281845                   T 37 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189367  3 +    196477 A--A------------------------------A
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 65 C 0
s Nasalis_larvatus.k141_413338                               15164  3 +     21681 a--a------------------------------a
i Nasalis_larvatus.k141_413338                           C 0 I 107
s Neomonachus_schauinslandi.NINY01007730.1                20307609  3 +  31847680 a--a------------------------------a
i Neomonachus_schauinslandi.NINY01007730.1               I 373 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149500  3 -   9404916 a--a------------------------------a
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 80 C 0
s Nycticebus_bengalensis.LG01                            102586303  1 - 196305487 G----------------------------------
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              227  1 +      2075 G----------------------------------
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761657  1 + 199412804 G----------------------------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1363561 18 +   3988456 g--a---------------aaaggtgtggggggca
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  746939  3 +  11899542 g--g------------------------------c
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                              506759  3 -   2017862 a--a------------------------------a
i Odobenus_rosmarus.KB229312.1                           I 63 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9947  7 -     18566 A--AA-AAA-------------------------A
i Orycteropus_afer.OryAfe_flattened_line_144387          I 60 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147414  2 + 174332312 g--g-------------------------------
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 1
s Otocyon_megalotis.JAEUCK010005147.1                       462448  3 -    559221 a--a------------------------------a
i Otocyon_megalotis.JAEUCK010005147.1                    I 63 C 0
s Otolemur_crassicaudatus.k141_222918                         4217  3 +      8798 G--G------------------------------G
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696380  3 -   1103335 G--G------------------------------g
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    44118  3 +     80009 a--a------------------------------a
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189143133  3 + 189151597 a--a------------------------------a
i Pan_troglodytes.CM009242.2                             I 5 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  151261  3 +    230217 A--A------------------------------A
i Panthera_onca.PanOnc_flattened_line_3271               I 48 C 0
s Panthera_pardus.KV860321.1                                264470  3 +  18783137 a--a------------------------------a
i Panthera_pardus.KV860321.1                             I 48 C 0
s Panthera_tigris.KE722367.1                               4721349  3 -   8748460 a--a------------------------------a
i Panthera_tigris.KE722367.1                             I 48 C 0
s Papio_anubis.CM001495.2                                183443214  3 + 183742232 a--a------------------------------a
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             6912  3 +     20448 a--a------------------------------a
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563720  3 +  20919399 a--a------------------------------a
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   5656  3 +     41871 a--a------------------------------a
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     8941  3 +     27711 a--a------------------------------a
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  9022  3 +      9205 a--a------------------------------a
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12758  3 -     78924 A--A------------------------------A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 63 C 0
s Perodicticus_ibeanus.k141_855320                           10191  1 +     13100 G----------------------------------
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8597  1 +     25941 G----------------------------------
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28210  3 -     29689 G--G------------------------------C
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Piliocolobus_badius.k141_1234363                           43675  3 +     62158 a--a------------------------------a
i Piliocolobus_badius.k141_1234363                       C 0 I 87
s Piliocolobus_gordonorum.k141_381342                        38406  3 +     89929 a--a------------------------------a
i Piliocolobus_gordonorum.k141_381342                    C 0 I 103
s Piliocolobus_kirkii.k141_448987                            39822  3 +     51399 a--a------------------------------a
i Piliocolobus_kirkii.k141_448987                        C 0 I 103
s Piliocolobus_tephrosceles.PDMG02000141.1                14296060  3 -  14605196 a--a------------------------------a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 103
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1859  3 +     22620 A--A------------------------------A
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 63 C 0
s Pongo_abelii.CM009266.2                                189131160  3 + 189387572 a--a------------------------------a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570768  3 +   9816681 a--a------------------------------a
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               73344  3 -     81375 a--a------------------------------a
i Presbytis_comata.k141_677006                           C 0 I 103
s Presbytis_mitrata.k141_1087752                              5164  3 +     19060 a--a------------------------------a
i Presbytis_mitrata.k141_1087752                         C 0 I 103
s Procavia_capensis.ProCapCap_scaffold_85530                 13451  3 -     22811 T--T------------------------------T
i Procavia_capensis.ProCapCap_scaffold_85530             I 60 C 0
s Prolemur_simus.MPIZ01000396.1                            2596822  3 -   4620579 a--a------------------------------g
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990804  3 +   2598838 g--a------------------------------a
i Propithecus_coquerelli.NW_012148875.1                  I 1 C 0
s Propithecus_coronatus.k141_347390                          29116  3 +     38485 g--a------------------------------a
i Propithecus_coronatus.k141_347390                      I 1 C 0
s Propithecus_diadema.k141_58108                              1159  3 -     13098 G--A------------------------------A
i Propithecus_diadema.k141_58108                         I 1 C 0
s Propithecus_edwardsi.k141_1176054                          26637  3 +     35766 g--a------------------------------a
i Propithecus_edwardsi.k141_1176054                      I 1 C 0
s Propithecus_perrieri.k141_1200571                           4824  3 -     24134 G--A------------------------------A
i Propithecus_perrieri.k141_1200571                      I 1 C 0
s Propithecus_tattersalli.k141_790011                        28649  3 -     67325 G--A------------------------------A
i Propithecus_tattersalli.k141_790011                    I 1 C 0
s Propithecus_verreauxi.k141_956661                           4872  3 -      6182 G--A------------------------------A
i Propithecus_verreauxi.k141_956661                      I 1 C 0
s Pteronotus_parnellii.KE909381.1                            15178  3 -     21811 a--a------------------------------a
i Pteronotus_parnellii.KE909381.1                        I 67 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40343  3 +     42204 A--A------------------------------A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 64 C 0
s Pteropus_alecto.KB030862.1                              22976886  3 +  28871421 a--a------------------------------a
i Pteropus_alecto.KB030862.1                             I 63 C 0
s Pteropus_vampyrus.KN534172.1                                6939  3 -      8028 a--a------------------------------a
i Pteropus_vampyrus.KN534172.1                           I 63 C 0
s Puma_concolor.QAVW01001104.1                            20274415  3 -  38429054 a--a------------------------------a
i Puma_concolor.QAVW01001104.1                           I 48 C 0
s Pygathrix_cinerea.k141_1153803                             15173  3 -     91421 a--a------------------------------a
i Pygathrix_cinerea.k141_1153803                         C 0 I 107
s Pygathrix_nigripes_b.ctg100                                 7609293  3 +   7812017 a--a------------------------------a
i Pygathrix_nigripes_b.ctg100                               C 0 I 107
s Pygathrix_nigripes_a.k141_215492                             15145  3 -     72585 a--a------------------------------a
i Pygathrix_nigripes_a.k141_215492                         C 0 I 107
s Rhinopithecus_bieti.k119_217274                             6859  3 -     11128 a--a------------------------------a
i Rhinopithecus_bieti.k119_217274                        C 0 I 106
s Rhinopithecus_roxellana.NC_044550.1                     91236212  3 - 195417433 a--a------------------------------a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 100
s Rhinopithecus_strykeri.ctg102                            7671864  3 +   7961872 a--a------------------------------a
i Rhinopithecus_strykeri.ctg102                          C 0 I 106
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87908  3 -     96226 A--G------------------------------A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 64 C 0
s Saguinus_bicolor.k141_8081                                   389  3 +     42994 a--a------------------------------a
i Saguinus_bicolor.k141_8081                             I 5 I 9
s Saguinus_imperator.k141_2524406                             2138  3 +      2197 a--a------------------------------a
i Saguinus_imperator.k141_2524406                        C 0 I 3
s Saguinus_inustus.k141_699149                               13557  3 +     13640 a--a------------------------------a
i Saguinus_inustus.k141_699149                           C 0 I 3
s Saguinus_labiatus.k141_285685                               8426  3 +      8564 a--a------------------------------a
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469276  3 + 209938924 a--a------------------------------a
i Saguinus_midas.LG03                                    C 0 I 473
s Saguinus_mystax.k141_374627                                 7982  3 -      9399 a--a------------------------------a
i Saguinus_mystax.k141_374627                            C 0 I 402
s Saimiri_boliviensis.NW_024100920.1                     119951117  6 - 121099817 a--a---------------------------atga
i Saimiri_boliviensis.NW_024100920.1                     C 0 I 9
s Saimiri_cassiquiarensis.k141_2188234                       23456  6 +     46362 a--a---------------------------atga
i Saimiri_cassiquiarensis.k141_2188234                   C 0 I 9
s Saimiri_macrodon.k141_716185                               23551  6 +     45824 a--a---------------------------atga
i Saimiri_macrodon.k141_716185                           C 0 I 9
s Saimiri_oerstedii.k141_1487881                             40230  6 -     64574 a--a---------------------------atga
i Saimiri_oerstedii.k141_1487881                         C 0 I 9
s Saimiri_sciureus.k141_2278166                               3302  6 -     23631 a--a---------------------------atga
i Saimiri_sciureus.k141_2278166                          C 0 I 9
s Saimiri_ustus.k141_1484609                                 23447  6 -     61129 a--a---------------------------atga
i Saimiri_ustus.k141_1484609                             C 0 I 9
s Sapajus_apella.ctg103                                    5420664  3 -   5703754 a--a------------------------------a
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          56058  6 -     80660 a--a---------------------------atga
i Sapajus_macrocephalus.k141_351809                      I 353 I 9
s Semnopithecus_entellus.k141_1672505                          144  3 -     12572 A--A------------------------------A
i Semnopithecus_entellus.k141_1672505                    I 5 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26887  3 +     39453 a--a------------------------------a
i Semnopithecus_hypoleucos.k141_1615806                  C 0 I 107
s Semnopithecus_johnii.k141_670120                            7406  3 +     27826 a--a------------------------------a
i Semnopithecus_johnii.k141_670120                       C 0 I 106
s Semnopithecus_priam.k141_638794                             6927  3 -     19483 a--a------------------------------a
i Semnopithecus_priam.k141_638794                        C 0 I 107
s Semnopithecus_schistaceus.k141_1572284                       335  3 -     12762 A--A------------------------------A
i Semnopithecus_schistaceus.k141_1572284                 I 5 C 0
s Semnopithecus_vetulus.k141_910252                            196  3 +     13763 A--A------------------------------A
i Semnopithecus_vetulus.k141_910252                      I 5 C 0
s Spermophilus_dauricus.KZ294078.1                         1954033  3 -   3870691 a--a------------------------------g
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30845  3 +     97271 A--A------------------------------A
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 65 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              18431  3 -    196729 A--A------------------------------A
i Suricata_suricatta.SurSur_flattened_line_6629          I 68 C 0
s Sus_scrofa.CM000828.4                                    6810868  3 +  69701581 t--a------------------------------a
i Sus_scrofa.CM000828.4                                  I 329 I 1
s Tadarida_brasiliensis.TadBra_scaffold_25820                10900  3 +     41958 A--A------------------------------A
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 60 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72728  3 +    116680 A--A------------------------------A
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 65 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118858  3 -    156842 A--A------------------------------A
i Tapirus_indicus.TapInd_scaffold_9301                   I 64 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387315  3 +    539355 A--A------------------------------A
i Tapirus_terrestris.TapTer_scaffold_755                 I 64 C 0
s Tarsius_lariang.k141_2201908                               26435  3 +     70052 g--a------------------------------a
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1268  3 -     16117 g--a------------------------------a
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428584  3 + 186847797 a--a------------------------------a
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105530  3 +    114563 G--G------------------------------C
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   6510  5 +      8208 A--AA-A---------------------------A
i Tolypeutes_matacus.TolMat_scaffold_228639              I 65 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81297  3 +    610378 T--A------------------------------A
i Tonatia_saurophila.TonSau_scaffold_294                 I 64 C 0
s Trachypithecus_auratus.k141_722599                         10978  3 -     20410 a--a------------------------------a
i Trachypithecus_auratus.k141_722599                     C 0 I 107
s Trachypithecus_crepusculus.k141_582567                        92  3 -     12674 a--a------------------------------a
i Trachypithecus_crepusculus.k141_582567                 C 0 I 107
s Trachypithecus_cristatus.k141_580354                       11079  3 +     19930 a--a------------------------------a
i Trachypithecus_cristatus.k141_580354                   C 0 I 107
s Trachypithecus_francoisi.k141_1412647                       7506  3 -     19997 a--a------------------------------a
i Trachypithecus_francoisi.k141_1412647                  C 0 I 91
s Trachypithecus_geei.k141_277701                            47630  3 -     60166 a--a------------------------------a
i Trachypithecus_geei.k141_277701                        C 0 I 106
s Trachypithecus_germaini.k141_912491                        15101  3 -     27529 a--a------------------------------a
i Trachypithecus_germaini.k141_912491                    C 0 I 107
s Trachypithecus_hatinhensis.k141_143409                     15045  3 -     18194 a--a------------------------------a
i Trachypithecus_hatinhensis.k141_143409                 C 0 I 107
s Trachypithecus_laotum.k141_907409                           8773  3 -     21137 a--a------------------------------a
i Trachypithecus_laotum.k141_907409                      C 0 I 91
s Trachypithecus_leucocephalus.k141_587342                    7476  3 -     10723 A--a------------------------------a
i Trachypithecus_leucocephalus.k141_587342               C 0 I 91
s Trachypithecus_melamera.k141_434728                         6632  3 +      9834 a--a------------------------------a
i Trachypithecus_melamera.k141_434728                    C 0 I 107
s Trachypithecus_obscurus.k141_190785                        24945  3 +     32220 a--a------------------------------a
i Trachypithecus_obscurus.k141_190785                    C 0 I 107
s Trachypithecus_phayrei.ctg124                            5939047  3 +   6242583 a--a------------------------------a
i Trachypithecus_phayrei.ctg124                          C 0 I 107
s Trachypithecus_pileatus.k141_2007326                        8299  3 +     20839 a--a------------------------------a
i Trachypithecus_pileatus.k141_2007326                   C 0 I 106
s Trichechus_manatus.JH594705.1                            4293350  3 +  10818551 a--a------------------------------t
i Trichechus_manatus.JH594705.1                          I 60 C 0
s Ursus_maritimus.KK499267.1                               4850543  3 -   5085361 a--a------------------------------a
i Ursus_maritimus.KK499267.1                             I 63 C 0
s Varecia_rubra.k141_590885                                  11482  3 +     50397 A--A------------------------------G
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11541  3 +     24756 A--A------------------------------G
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371985  3 -   5488506 a--a------------------------------a
i Vicugna_pacos.KN270157.1                               I 68 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10896  3 -     43706 A--A------------------------------A
i Vulpes_lagopus.VulLag_flattened_line_30954             I 63 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          5472  3 +     86975 a--a------------------------------a
i Zalophus_californianus.ZalCal_flattened_line_17732     I 63 C 0
e Mus_pahari.LT608297.1                                   31355125 13 -  89631738 T
e Mus_spretus.CM004101.1                                  90752527 13 - 130317789 T
e Mus_musculus.chr8                                       87650466 13 - 129401213 T
e Mus_caroli.LT608237.1                                   84361468 13 - 120012414 T
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      14994  0 +     63895 C
e Xerus_inauris.XerIna_scaffold_2302                          1173  0 +    224448 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   53362 63 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     9343  0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2155690  0 +   4065304 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Sorex_araneus.JH798187.1                                13651056 93 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               3814 63 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11982 13 -     12148 T
e Scalopus_aquaticus.ScaAqu_scaffold_662                    153257 71 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570728 13 +  90668790 T
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Psammomys_obesus.NESX01036370.1                            10498 13 -     21651 T
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Peromyscus_maniculatus.KI615324.1                       18194880 13 -  18517816 T
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80254 13 +    102263 T
e Ondatra_zibethicus.OndZib_scaffold_46174                   25254 13 +     28053 T
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Nannospalax_galili.KL204047.1                            2034165  0 -   3037898 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11260586 13 -  27267610 T
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182348 13 -  29670104 T
e Meriones_unguiculatus.MerUng_scaffold_7390                 32854 13 +    140813 T
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276898  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3328282 71 -   7059049 I
e Ellobius_talpinus.LOJH01081419.1                             538 13 +      8657 T
e Ellobius_lutescens.LOEQ01008920.1                          20407 13 -    110024 T
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Crocidura_indochinensis.CroInd_scaffold_37019               3028 88 -     19598 I
e Cricetulus_griseus.LT883664.1                           11667673 13 + 224834208 T
e Cricetomys_gambianus.CriGam_scaffold_18520                 50293  0 +     63868 C
e Condylura_cristata.JH655891.1                           17548142 67 -  53390261 I
e Colobus_guereza.LG01                                   199948999 41 + 200372422 T
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e CanFam4.chr16                                           17799210 78 -  60362399 I
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74597  0 -     89534 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     70906 13 +     87051 T

a score=0.000000
s hg38.chrUn_KI270753v1                                       6890 3 +     62944 a----g----a
s Allenopithecus_nigroviridis.k141_3361533                   14702 3 -     52922 a----g----g
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         14638 3 -     28001 a----g----g
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          5134 3 -     18505 a----g----g
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           5988 3 -     12518 a----g----g
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              7466 3 +     51355 g----g----g
i Alouatta_belzebul.k141_3560514                         T 197 C 0
s Alouatta_caraya.k141_1701091                                 588 3 -     36483 g----g----g
i Alouatta_caraya.k141_1701091                           T 183 C 0
s Alouatta_discolor.k141_566626                              11223 3 +     28687 a----a----g
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1509701                                24853 3 +     25266 g----g----g
i Alouatta_juara.k141_1509701                            T 194 C 0
s Alouatta_macconnelli.k141_918386                             582 3 -      9457 g----g----g
i Alouatta_macconnelli.k141_918386                       T 186 I 186
s Alouatta_nigerrima.k141_3472759                            18160 3 -     18578 g----g----g
i Alouatta_nigerrima.k141_3472759                        T 194 C 0
s Alouatta_palliata.k141_2135620                              3547 3 +     47717 A----G----A
i Alouatta_palliata.k141_2135620                         T 191 C 0
s Alouatta_puruensis.k141_362188                               252 3 +      5663 g----g----g
i Alouatta_puruensis.k141_362188                         T 198 C 0
s Alouatta_seniculus.k141_117119                             14902 3 +     50774 A----A----G
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185453 3 +    412891 G----G----A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  15489 3 -     33861 a----g----a
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            15509 3 -     34016 a----g----a
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297906 3 -   5030052 a----g----a
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             15511 3 -     34685 a----g----a
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28635 3 -     47192 a----g----a
i Aotus_vociferans.k141_344750                           C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       11557 3 +     14667 G----T----G
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4861 3 +     43469 G----A----A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  53763 3 -     92717 A----G----A
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54390 3 +     85213 A----G----A
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             5244 3 -     10423 a----g----a
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             24978 7 +     31915 a----agaaag
i Callimico_goeldii.k141_1091182                         I 263 T 267
s Callithrix_geoffroyi.k119_512088                            5210 3 +      5267 a----g----a
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590424 3 - 189096842 a----g----a
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             11955 3 -     12001 A----G----A
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002488 3 -  17673402 g----g----c
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334946 3 -   7040546 g----g----c
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  403229 3 -   1652518 g----g----c
i Camelus_ferus.KB017975.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1146 3 -     12242 A----A----A
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007247396.1                           201431 3 +    308752 g----g----a
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5215 3 -     11696 G----G----A
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137163 3 +    179628 G----A----A
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     93125 3 +    217609 G----A----A
i Catagonus_wagneri.CatWag_scaffold_2839                 I 1 C 0
s Cebuella_niveiventris.k141_1251222                          9869 3 -     11392 a----g----a
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               5967 3 -      7577 a----g----a
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25652429 1 +  26074798 ----------a
i Cebus_albifrons.Contig27                               I 434 C 0
s Cebus_olivaceus.k141_1764483                                 819 3 +     28840 a----a----a
i Cebus_olivaceus.k141_1764483                           I 9 I 4
s Cebus_unicolor.k141_1837183                                  545 3 +     14051 a----a----a
i Cebus_unicolor.k141_1837183                            I 17 I 3
s Cephalopachus_bancanus.k141_1423433                         5436 3 +     31688 g----g----a
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12231542 3 +  27778364 C----G----A
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2569 3 -     25243 C----G----A
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4475647 3 +   4669795 a----g----g
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        14192 3 -     19203 a----g----g
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3342297                            808 3 -     14043 a----g----g
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           8844 3 +     27781 a----g----g
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         9009 3 -     20310 a----g----g
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          11988 3 +     29689 a----g----g
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            6742 3 -     20078 a----g----g
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          14665 3 -     27936 a----g----g
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            3529 3 -     17152 a----g----g
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38817068 3 +  39242232 a----g----g
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222760 3 -  21565898 a----g----g
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       39878 3 -     53127 a----g----g
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                         129 3 +     13442 a----g----g
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14678 3 -     27947 a----g----g
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         14654 3 +     17596 a----g----g
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                           701 3 +     14005 a----g----g
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             640 1 -      8501 A----------
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 I 8
s Cheirogaleus_major.k141_333249                             21143 3 -     52598 A----G----A
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16508 3 +     57038 a----g----a
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1252894 3 +   2543920 g----g----a
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2813271                          11121 3 +     11226 A----G----A
i Chiropotes_albinasus.k141_2813271                      I 3 C 0
s Chlorocebus_aethiops.ctg25                              18428638 3 -  18827391 a----g----g
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15075 3 -     50209 a----g----g
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422075 3 + 135778131 a----g----g
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 18420 1 +     19366 A----------
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 I 8
s Choloepus_hoffmanni.KN194906.1                            173496 1 +    839153 a----------
i Choloepus_hoffmanni.KN194906.1                         C 0 I 9
s Colobus_angolensis.KN981557.1                            1910683 3 +   2368649 a----g----a
i Colobus_angolensis.KN981557.1                          I 103 T 103
s Colobus_polykomos.k141_906115                              37217 3 +     84244 a----g----a
i Colobus_polykomos.k141_906115                          I 103 T 103
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14518 1 -     20389 A----------
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837168 3 +   1526836 G----G----A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35853 3 +     51376 T----A----A
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            63647 1 +   2246927 a----------
i Dasypus_novemcinctus.JH564415.1                        C 0 I 8
s Daubentonia_madagascariensis.ctg71                      12537359 3 -  12879189 A----G----A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630227 3 +  20541912 g----g----a
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673393 3 +   1390856 c----g----a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6145 3 +    198055 C----G----A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36488 3 +     67921 G----G----A
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Echinops_telfairi.JH980293.1                            48780688 1 + 111700974 c----------
i Echinops_telfairi.JH980293.1                           C 0 I 3
s Eidolon_helvum.KE759718.1                                  10630 3 +     11740 a----g----g
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1097776 1 +  10337057 t----------
i Elephantulus_edwardii.JH947257.1                       C 0 I 3
s Eptesicus_fuscus.JH977646.1                              2145824 3 -  14770903 g----g----a
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1283647 3 +   4378816 g----g----a
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18531467 3 -  39960074 g----g----a
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               33496 3 +    498745 g----g----a
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21205245 3 -  21539334 a----g----g
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13865 3 -     14127 A----G----A
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6568 3 -     16928 A----G----A
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15592 3 -     25546 A----G----A
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12796 3 +     26330 a----g----a
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14031 3 +     23973 A----G----A
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12793 3 +     75513 a----g----a
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10723 3 +     97555 a----g----a
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              214 3 +     13026 a----g----a
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4267 3 -     17153 A----G----A
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13840 3 +    111500 A----G----A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Fukomys_damarensis.KN121974.1                             850522 3 +   3816255 a----g----a
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg2040                                     426691 3 -    453645 G----T----G
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4381 3 +     11339 G----T----g
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            1693 3 +     41679 G----T----G
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1262 3 -      9135 g----g----a
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            31457 1 +     49224 G----------
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              16028 3 -     32273 a----g----a
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186338174 3 + 186649187 a----g----a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   32698 1 +     78134 A----------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6904 3 -     19426 A----G----A
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12053 3 -     15286 A----G----A
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13692 3 +     18253 a----g----a
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13793 3 -     41752 A----G----A
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13630 3 -     16460 A----G----A
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20662311 3 +  22651954 a----g----a
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                 999 1 +      7595 C----------
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 I 3
s Hoolock_leuconedys.ctg274                                    434840 3 +    630532 a----g----a
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83200 3 +    135385 G----G----A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7520981 1 -   7955117 g----------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   22584 3 +     31101 a----g----a
i Indri_indri.k141_3655594                               C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    16472 3 -     42476 A----G----A
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15524145 3 -  30322482 A----G----A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7785 7 +     64341 aagaaa----g
i Leontocebus_fuscicollis.k141_1820339                   I 279 T 283
s Leontocebus_illigeri.k141_1304848                            125 7 -     35062 aagaaa----g
i Leontocebus_illigeri.k141_1304848                      I 17 I 3
s Leontocebus_nigricollis.k141_4610752                        7813 7 +     35603 aagaaa----g
i Leontocebus_nigricollis.k141_4610752                   I 266 T 270
s Leontopithecus_chrysomelas.k141_1519602                    29229 7 +     38576 a----agaaag
i Leontopithecus_chrysomelas.k141_1519602                I 221 T 225
s Leontopithecus_rosalia.k141_464620                         25929 7 +     66356 a----agaaag
i Leontopithecus_rosalia.k141_464620                     I 224 T 228
s Lepilemur_ankaranensis.k141_596936                         11039 3 -     23766 A----G----A
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29100 3 +     45836 A----G----A
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1640 3 +     25010 A----G----A
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27036 3 +     54090 A----G----A
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437194 3 +   1826925 a----g----g
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5940 3 +     11245 G----T----G
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004760 3 +   6120653 G----T----G
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4217432 1 -  43346337 t----------
i Loxodonta_africana.GL010049.1                          C 0 I 3
s Macaca_arctoides.k141_2326796                               7004 3 +     40492 a----a----a
i Macaca_arctoides.k141_2326796                          T 100 C 0
s Macaca_assamensis.Contig5                               59676263 3 +  60120075 a----a----a
i Macaca_assamensis.Contig5                              T 100 C 0
s Macaca_cyclopis.k119_18836                                 12776 3 -     26193 a----a----a
i Macaca_cyclopis.k119_18836                             T 103 C 0
s Macaca_fascicularis.k141_814140                            80560 3 -    114318 a----a----a
i Macaca_fascicularis.k141_814140                        T 103 C 0
s Macaca_fuscata.k119_255327                                  6251 3 -     23192 a----a----a
i Macaca_fuscata.k119_255327                             T 99 C 0
s Macaca_leonina.k141_3550399                                15720 3 -     29190 a----a----a
i Macaca_leonina.k141_3550399                            T 103 C 0
s Macaca_maura.k141_2733130                                  24285 3 +     37952 a----a----a
i Macaca_maura.k141_2733130                              T 103 C 0
s Macaca_mulatta.NC_041758.1                             186839374 3 + 187317192 a----a----a
i Macaca_mulatta.NC_041758.1                             T 103 C 0
s Macaca_nemestrina.KQ007038.1                            25457937 3 -  25927173 a----a----a
i Macaca_nemestrina.KQ007038.1                           T 103 C 0
s Macaca_nigra.k141_1655396                                  80133 3 +     89720 a----a----a
i Macaca_nigra.k141_1655396                              T 103 C 0
s Macaca_radiata.k141_3680011                                 7134 3 +     20474 a----a----a
i Macaca_radiata.k141_3680011                            T 103 C 0
s Macaca_siberu.k141_635500                                   6934 3 -     14993 a----a----a
i Macaca_siberu.k141_635500                              T 103 C 0
s Macaca_silenus.Contig273                                  329800 3 -    668171 a----a----a
i Macaca_silenus.Contig273                               T 103 C 0
s Macaca_thibetana.k99_256239                                 5250 3 -     24072 a----a----a
i Macaca_thibetana.k99_256239                            T 100 C 0
s Macaca_tonkeana.k141_1498238                               25872 3 -     45290 a----a----a
i Macaca_tonkeana.k141_1498238                           T 103 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90723 3 +     94391 A----G----G
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23937467 3 -  24302211 a----g----g
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               351595 3 +    752769 a----g----g
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33103181 1 -  40650429 g----------
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        10431 4 -    207569 A---GG----A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mico_argentatus.k141_1239457                                5784 3 -      7380 a----g----a
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               4857 3 +     18990 a----g----a
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      5796 3 -      7356 a----g----a
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18291566 3 -  93316391 a----g----a
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    22437 1 -    145209 C----------
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 3
s Micronycteris_hirsuta.MicHir_scaffold_52381                15759 3 -     19307 G----G----A
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850717 3 +   8254450 g----g----a
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34398 3 +     64694 G----G----A
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9192 3 -     28506 a----g----g
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirza_zaza.k141_952172                                      9111 3 -     37649 A----G----A
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141726 3 -    366855 A----A----A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           6921 3 +     14753 G----G----A
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              5046 1 +     14296 T----------
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71332 3 -     80779 G----A----A
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                280564 3 -  10118263 g----g----a
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1587826 3 -   6019432 g----g----a
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3903918 3 -   4330536 g----g----a
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                          70 3 +      1835 G----G----A
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189370 1 +    196477 A----------
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 I 9
s Nasalis_larvatus.k141_413338                               15274 3 +     21681 a----g----a
i Nasalis_larvatus.k141_413338                           I 107 T 107
s Nycticebus_bengalensis.LG01                            102586304 3 - 196305487 G----T----G
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              228 3 +      2075 G----T----G
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761658 3 + 199412804 G----T----G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1363579 3 +   3988456 g----a----a
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  746942 3 +  11899542 a----a----a
i Octodon_degus.JH651603.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9954 1 -     18566 A----------
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 I 3
s Otolemur_crassicaudatus.k141_222918                         4220 3 +      8798 G----T----G
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696383 3 -   1103335 g----t----g
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    44121 3 +     80009 a----g----a
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189143136 3 + 189151597 a----g----a
i Pan_troglodytes.CM009242.2                             C 0 I 2
s Papio_anubis.CM001495.2                                183443217 3 + 183742232 a----g----g
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             6915 3 +     20448 a----g----g
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563723 3 +  20919399 a----g----g
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   5659 3 +     41871 a----g----g
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     8944 3 +     27711 a----g----g
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  9025 3 +      9205 a----g----g
i Papio_ursinus.k141_3428135                             C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10192 3 +     13100 G----T----G
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8598 3 +     25941 G----T----G
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28213 3 -     29689 A----G----A
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Piliocolobus_badius.k141_1234363                           43765 3 +     62158 a----g----a
i Piliocolobus_badius.k141_1234363                       I 87 T 87
s Piliocolobus_gordonorum.k141_381342                        38512 3 +     89929 a----g----a
i Piliocolobus_gordonorum.k141_381342                    I 103 T 103
s Piliocolobus_kirkii.k141_448987                            39928 3 +     51399 a----g----a
i Piliocolobus_kirkii.k141_448987                        I 103 T 103
s Piliocolobus_tephrosceles.PDMG02000141.1                14296166 3 -  14605196 a----g----a
i Piliocolobus_tephrosceles.PDMG02000141.1               I 103 T 103
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1862 3 +     22620 G----A----A
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189131163 3 + 189387572 a----g----a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570771 3 +   9816681 a----g----a
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               73450 3 -     81375 a----g----a
i Presbytis_comata.k141_677006                           I 103 T 103
s Presbytis_mitrata.k141_1087752                              5270 3 +     19060 a----g----a
i Presbytis_mitrata.k141_1087752                         I 103 T 103
s Procavia_capensis.ProCapCap_scaffold_85530                 13454 1 -     22811 C----------
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 I 3
s Prolemur_simus.MPIZ01000396.1                            2596825 3 -   4620579 a----g----a
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990807 3 +   2598838 g----g----a
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29119 3 +     38485 a----g----a
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1162 3 -     13098 A----G----A
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26640 3 +     35766 a----g----a
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4827 3 -     24134 A----G----A
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28652 3 -     67325 A----G----A
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4875 3 -      6182 A----G----A
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            15181 3 -     21811 g----g----a
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteropus_alecto.KB030862.1                              22976889 3 +  28871421 a----g----g
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                6942 3 -      8028 a----g----g
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15283 3 -     91421 a----g----a
i Pygathrix_cinerea.k141_1153803                         I 107 T 107
s Pygathrix_nigripes_b.ctg100                                 7609403 3 +   7812017 a----g----a
i Pygathrix_nigripes_b.ctg100                               I 107 T 107
s Pygathrix_nigripes_a.k141_215492                             15255 3 -     72585 a----g----a
i Pygathrix_nigripes_a.k141_215492                         I 107 T 107
s Rhinopithecus_bieti.k119_217274                             6968 3 -     11128 a----g----a
i Rhinopithecus_bieti.k119_217274                        I 106 T 106
s Rhinopithecus_roxellana.NC_044550.1                     91236315 3 - 195417433 a----g----a
i Rhinopithecus_roxellana.NC_044550.1                    I 100 T 100
s Rhinopithecus_strykeri.ctg102                            7671973 3 +   7961872 a----g----a
i Rhinopithecus_strykeri.ctg102                          I 106 T 106
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87911 3 -     96226 A----G----G
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_8081                                   401 7 +     42994 aagaaa----g
i Saguinus_bicolor.k141_8081                             I 9 I 3
s Saguinus_imperator.k141_57697                                186 7 +      1030 aagaaa----g
i Saguinus_imperator.k141_57697                          I 17 I 3
s Saguinus_inustus.k141_3945547                                270 7 -      8737 aagaaa----g
i Saguinus_inustus.k141_3945547                          I 17 I 2
s Saguinus_labiatus.k141_285685                               8429 3 +      8564 a----g----a
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469752 7 + 209938924 aagaaa----g
i Saguinus_midas.LG03                                    I 473 T 477
s Saguinus_mystax.k141_374627                                 8387 7 -      9399 aagaaa----g
i Saguinus_mystax.k141_374627                            I 402 T 406
s Saimiri_boliviensis.NW_024100920.1                     119951132 3 - 121099817 a----a----a
i Saimiri_boliviensis.NW_024100920.1                     I 9 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23471 3 +     46362 a----a----a
i Saimiri_cassiquiarensis.k141_2188234                   I 9 C 0
s Saimiri_macrodon.k141_716185                               23566 3 +     45824 a----a----a
i Saimiri_macrodon.k141_716185                           I 9 C 0
s Saimiri_oerstedii.k141_1487881                             40245 3 -     64574 a----a----a
i Saimiri_oerstedii.k141_1487881                         I 9 C 0
s Saimiri_sciureus.k141_2278166                               3317 3 -     23631 a----a----a
i Saimiri_sciureus.k141_2278166                          I 9 C 0
s Saimiri_ustus.k141_1484609                                 23462 3 -     61129 a----a----a
i Saimiri_ustus.k141_1484609                             I 9 C 0
s Sapajus_apella.ctg103                                    5420667 1 -   5703754 ----------a
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          56073 3 -     80660 a----a----a
i Sapajus_macrocephalus.k141_351809                      I 9 T 367
s Semnopithecus_entellus.k141_1672505                          147 3 -     12572 A----G----A
i Semnopithecus_entellus.k141_1672505                    C 0 I 3
s Semnopithecus_hypoleucos.k141_1615806                      26997 3 +     39453 a----g----a
i Semnopithecus_hypoleucos.k141_1615806                  I 107 T 107
s Semnopithecus_johnii.k141_670120                            7515 3 +     27826 a----g----a
i Semnopithecus_johnii.k141_670120                       I 106 T 106
s Semnopithecus_priam.k141_638794                             7037 3 -     19483 a----g----a
i Semnopithecus_priam.k141_638794                        I 107 T 107
s Semnopithecus_schistaceus.k141_1572284                       338 3 -     12762 A----G----A
i Semnopithecus_schistaceus.k141_1572284                 C 0 I 2
s Semnopithecus_vetulus.k141_910252                            199 3 +     13763 A----G----A
i Semnopithecus_vetulus.k141_910252                      C 0 I 2
s Spermophilus_dauricus.KZ294078.1                         1954036 1 -   3870691 g----------
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Sus_scrofa.CM000828.4                                    6810872 3 +  69701581 g----t----a
i Sus_scrofa.CM000828.4                                  I 1 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                10903 3 +     41958 G----G----A
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72731 1 +    116680 A----------
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 I 9
s Tapirus_indicus.TapInd_scaffold_9301                      118861 3 -    156842 G----G----A
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387318 3 +    539355 G----G----A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               26438 3 +     70052 g----g----a
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1271 3 -     16117 g----g----a
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428587 3 + 186847797 a----g----g
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105533 3 +    114563 A----G----A
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   6515 1 +      8208 A----------
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 I 8
s Tonatia_saurophila.TonSau_scaffold_294                     81300 3 +    610378 T----G----A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         11088 3 -     20410 a----g----a
i Trachypithecus_auratus.k141_722599                     I 107 T 107
s Trachypithecus_crepusculus.k141_582567                       202 3 -     12674 a----g----a
i Trachypithecus_crepusculus.k141_582567                 I 107 T 107
s Trachypithecus_cristatus.k141_580354                       11189 3 +     19930 a----g----a
i Trachypithecus_cristatus.k141_580354                   I 107 T 107
s Trachypithecus_francoisi.k141_1412647                       7600 3 -     19997 a----g----a
i Trachypithecus_francoisi.k141_1412647                  I 91 T 91
s Trachypithecus_geei.k141_277701                            47739 3 -     60166 a----g----a
i Trachypithecus_geei.k141_277701                        I 106 T 106
s Trachypithecus_germaini.k141_912491                        15211 3 -     27529 a----g----a
i Trachypithecus_germaini.k141_912491                    I 107 T 107
s Trachypithecus_hatinhensis.k141_143409                     15155 3 -     18194 a----g----a
i Trachypithecus_hatinhensis.k141_143409                 I 107 T 107
s Trachypithecus_laotum.k141_907409                           8867 3 -     21137 a----g----a
i Trachypithecus_laotum.k141_907409                      I 91 T 91
s Trachypithecus_leucocephalus.k141_587342                    7570 3 -     10723 a----g----a
i Trachypithecus_leucocephalus.k141_587342               I 91 T 91
s Trachypithecus_melamera.k141_434728                         6742 3 +      9834 a----g----a
i Trachypithecus_melamera.k141_434728                    I 107 T 107
s Trachypithecus_obscurus.k141_190785                        25055 3 +     32220 a----g----a
i Trachypithecus_obscurus.k141_190785                    I 107 T 107
s Trachypithecus_phayrei.ctg124                            5939157 3 +   6242583 a----g----a
i Trachypithecus_phayrei.ctg124                          I 107 T 107
s Trachypithecus_pileatus.k141_2007326                        8408 3 +     20839 a----g----a
i Trachypithecus_pileatus.k141_2007326                   I 106 T 106
s Trichechus_manatus.JH594705.1                            4293353 1 +  10818551 t----------
i Trichechus_manatus.JH594705.1                          C 0 I 3
s Varecia_rubra.k141_590885                                  11485 3 +     50397 A----G----A
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11544 3 +     24756 A----G----A
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371988 3 -   5488506 g----g----c
i Vicugna_pacos.KN270157.1                               C 0 C 0
e Mus_pahari.LT608297.1                                   31355125 13 -  89631738 T
e Mus_spretus.CM004101.1                                  90752527 13 - 130317789 T
e Mus_musculus.chr8                                       87650466 13 - 129401213 T
e Mus_caroli.LT608237.1                                   84361468 13 - 120012414 T
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      14994 0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5475 0 +     86975 C
e Xerus_inauris.XerIna_scaffold_2302                          1173 0 +    224448 C
e Vulpes_lagopus.VulLag_flattened_line_30954                 10899 0 -     43706 C
e Ursus_maritimus.KK499267.1                               4850546 0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   53362 63 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     9343 0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2155690 0 +   4065304 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Suricata_suricatta.SurSur_flattened_line_6629              18434 0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             30848 0 +     97271 C
e Sorex_araneus.JH798187.1                                13651056 93 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               3814 63 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11982 13 -     12148 T
e Scalopus_aquaticus.ScaAqu_scaffold_662                    153257 71 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570728 13 +  90668790 T
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20274418 0 -  38429054 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         40346 0 +     42204 C
e Psammomys_obesus.NESX01036370.1                            10498 13 -     21651 T
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Peromyscus_maniculatus.KI615324.1                       18194880 13 -  18517816 T
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12761 0 -     78924 C
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4721352 0 -   8748460 C
e Panthera_pardus.KV860321.1                                264473 0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  151264 0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       462451 0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                        67147416 1 + 174332312 I
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80254 13 +    102263 T
e Ondatra_zibethicus.OndZib_scaffold_46174                   25254 13 +     28053 T
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              506762 0 -   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9149503 0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20307612 0 +  31847680 C
e Nannospalax_galili.KL204047.1                            2034165 0 -   3037898 C
e Mustela_putorius.JH418006.1                               301347 0 -  14710649 C
e Mungos_mungo.MunMun_flattened_line_23663                   35531 0 +     37127 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         6026 0 -      8324 C
e Microtus_ochrogaster.CM001695.1                         11260586 13 -  27267610 T
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182348 13 -  29670104 T
e Meriones_unguiculatus.MerUng_scaffold_7390                 32854 13 +    140813 T
e Mellivora_capensis.MelCap_flattened_line_69365             10156 0 +     13704 C
e Manis_pentadactyla.KN006162.1                              50591 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18602 0 +    737560 C
e Lycaon_pictus.CM007581.1                                17955224 0 -  59628241 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     6537 1 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3043158 0 +   3914936 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276898 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  45125 0 +     55795 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               242431 0 +    327341 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Felis_nigripes.FelNig_flattened_line_20823                  9649 0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20195905 0 + 205367284 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3328282 71 -   7059049 I
e Enhydra_lutris.KZ291758.1                               16329419 0 -  41312741 C
e Ellobius_talpinus.LOJH01081419.1                             538 13 +      8657 T
e Ellobius_lutescens.LOEQ01008920.1                          20407 13 -    110024 T
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             28598 0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_37019               3028 88 -     19598 I
e Cricetulus_griseus.LT883664.1                           11667673 13 + 224834208 T
e Cricetomys_gambianus.CriGam_scaffold_18520                 50293 0 +     63868 C
e Condylura_cristata.JH655891.1                           17548142 67 -  53390261 I
e Colobus_guereza.LG01                                   199948999 41 + 200372422 T
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18500496 0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17958984 0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9034719 0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    185333 0 -    185531 C
e CanFam4.chr16                                           17799210 78 -  60362399 I
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      12706 8 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74597 0 -     89534 C
e Ailurus_fulgens.LNAC01001112.1                             79461 0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9510685 0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     70906 13 +     87051 T
e Acinonyx_jubatus.LLWD01001279.1                           827411 0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6893 2 +     62944 a-a
s Acinonyx_jubatus.LLWD01001279.1                           827411 1 -   1699592 --g
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510685 1 -  29979442 --g
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             79461 1 -    347723 --g
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14705 2 -     52922 a-g
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         14641 2 -     28001 a-g
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          5137 2 -     18505 a-g
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           5991 2 -     12518 a-g
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              7469 2 +     51355 a-g
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                 591 2 -     36483 a-g
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              11226 2 +     28687 a-a
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1509701                                24856 2 +     25266 a-g
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_918386                             771 2 -      9457 a-a
i Alouatta_macconnelli.k141_918386                       I 186 C 0
s Alouatta_nigerrima.k141_3472759                            18163 2 -     18578 a-g
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              3550 2 +     47717 a-g
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                               255 2 +      5663 a-g
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             14905 2 +     50774 A-A
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185456 2 +    412891 A-G
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  15492 2 -     33861 a-g
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            15512 2 -     34016 a-g
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297909 2 -   5030052 a-g
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             15514 2 -     34685 a-g
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28638 2 -     47192 a-g
i Aotus_vociferans.k141_344750                           C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       11560 2 +     14667 A-A
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4864 2 +     43469 A-G
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  53766 2 -     92717 A-A
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54393 2 +     85213 A-A
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             5247 2 -     10423 a-g
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             24718 2 +     31915 a-g
i Callimico_goeldii.k141_1091182                         T 267 C 0
s Callithrix_geoffroyi.k119_512088                            5213 2 +      5267 a-g
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590427 2 - 189096842 a-g
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             11958 2 -     12001 A-G
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002491 2 -  17673402 a-a
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334949 2 -   7040546 a-a
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  403232 2 -   1652518 a-a
i Camelus_ferus.KB017975.1                               C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    185333 1 -    185531 --G
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034719 1 -   9314153 --g
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17958984 1 -  59632846 --g
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18500496 1 +  63665305 --g
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007247396.1                           201434 2 +    308752 a-g
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5218 2 -     11696 A-G
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     93128 2 +    217609 A-A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          9872 2 -     11392 a-a
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               5970 2 -      7577 a-g
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25652430 2 +  26074798 a-g
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_398305                                 1572 2 +      1777 a-g
i Cebus_olivaceus.k141_398305                            I 5 C 0
s Cebus_unicolor.k141_544048                                 49909 2 -     74725 a-g
i Cebus_unicolor.k141_544048                             I 1 C 0
s Cephalopachus_bancanus.k141_1423433                         5439 2 +     31688 a-g
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12231545 2 +  27778364 A-G
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2572 2 -     25243 A-G
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4475650 2 +   4669795 a-g
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        14195 2 -     19203 a-g
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3342297                            811 2 -     14043 a-g
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           8847 2 +     27781 a-g
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         9012 2 -     20310 a-g
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          11991 2 +     29689 a-g
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            6745 2 -     20078 a-g
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          14668 2 -     27936 a-g
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            3532 2 -     17152 a-g
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38817071 2 +  39242232 a-g
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222763 2 -  21565898 a-g
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       39881 2 -     53127 a-g
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                         132 2 +     13442 a-g
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14681 2 -     27947 a-g
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         14657 2 +     17596 a-g
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                           704 2 +     14005 a-g
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheirogaleus_major.k141_333249                             21146 2 -     52598 A-A
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16511 2 +     57038 a-a
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2813271                          11124 2 +     11226 a-g
i Chiropotes_albinasus.k141_2813271                      C 0 T 5180
s Chlorocebus_aethiops.ctg25                              18428641 2 -  18827391 a-g
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15078 2 -     50209 a-g
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422078 2 + 135778131 a-g
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1910583 2 +   2368649 a-g
i Colobus_angolensis.KN981557.1                          T 103 C 0
s Colobus_polykomos.k141_906115                              37117 2 +     84244 a-g
i Colobus_polykomos.k141_906115                          T 103 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28598 1 -     87169 --G
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537362 2 -  12879189 A-A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630230 2 +  20541912 a-g
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673396 2 +   1390856 a-g
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6148 2 +    198055 A-G
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE759718.1                                  10633 2 +     11740 a-g
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Enhydra_lutris.KZ291758.1                               16329419 1 -  41312741 --g
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2145827 2 -  14770903 a-g
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1283650 2 +   4378816 a-g
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18531470 2 -  39960074 a-g
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               33499 2 +    498745 a-g
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21205248 2 -  21539334 a-g
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13868 2 -     14127 A-A
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6571 2 -     16928 A-A
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15595 2 -     25546 A-A
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12799 2 +     26330 a-a
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14034 2 +     23973 A-A
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12796 2 +     75513 a-a
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10726 2 +     97555 a-a
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              217 2 +     13026 a-a
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4270 2 -     17153 A-A
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13843 2 +    111500 A-A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237062 1 + 206538554 --g
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195905 1 + 205367284 --g
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  9649 1 -     36744 --G
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     426694 2 -    453645 A-A
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4384 2 +     11339 a-a
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            1696 2 +     41679 A-A
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1265 2 -      9135 a-g
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              16031 2 -     32273 a-g
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186338177 2 + 186649187 a-g
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6907 2 -     19426 A-A
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12056 2 -     15286 A-A
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13695 2 +     18253 a-a
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13796 2 -     41752 A-A
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13633 2 -     16460 A-A
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242431 1 +    327341 --G
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hoolock_leuconedys.ctg274                                    434843 2 +    630532 a-g
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45125 1 +     55795 --G
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Indri_indri.k141_3655594                                   22587 2 +     31101 a-a
i Indri_indri.k141_3655594                               C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    16475 2 -     42476 A-G
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15524148 2 -  30322482 A-A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7509 2 +     64341 a-g
i Leontocebus_fuscicollis.k141_1820339                   T 283 C 0
s Leontocebus_illigeri.k141_3350179                           4832 2 +      4941 a-g
i Leontocebus_illigeri.k141_3350179                      I 3 C 0
s Leontocebus_nigricollis.k141_4610752                        7550 2 +     35603 a-g
i Leontocebus_nigricollis.k141_4610752                   T 270 C 0
s Leontopithecus_chrysomelas.k141_1519602                    29011 2 +     38576 a-g
i Leontopithecus_chrysomelas.k141_1519602                T 225 C 0
s Leontopithecus_rosalia.k141_464620                         25708 2 +     66356 a-g
i Leontopithecus_rosalia.k141_464620                     T 228 C 0
s Lepilemur_ankaranensis.k141_596936                         11042 2 -     23766 A-A
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29103 2 +     45836 A-A
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1643 2 +     25010 A-A
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27039 2 +     54090 A-A
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3043158 1 +   3914936 --g
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437197 2 +   1826925 a-g
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5943 2 +     11245 A-A
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004763 2 +   6120653 A-A
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17955224 1 -  59628241 --g
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               7007 2 +     40492 a-g
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59676266 2 +  60120075 a-g
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 12779 2 -     26193 a-g
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            80563 2 -    114318 a-g
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  6254 2 -     23192 a-g
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                15723 2 -     29190 a-g
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  24288 2 +     37952 a-g
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186839377 2 + 187317192 a-g
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25457940 2 -  25927173 a-g
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  80136 2 +     89720 a-g
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 7137 2 +     20474 a-g
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   6937 2 -     14993 a-g
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  329803 2 -    668171 a-g
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 5253 2 -     24072 a-g
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               25875 2 -     45290 a-g
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90726 2 +     94391 A-G
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23937470 2 -  24302211 a-g
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               351598 2 +    752769 a-g
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              18602 1 +    737560 --g
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              50591 1 -    317179 --g
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        10435 2 -    207569 A-G
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10156 1 +     13704 --G
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mico_argentatus.k141_1239457                                5787 2 -      7380 a-g
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               4860 2 +     18990 a-g
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      5799 2 -      7356 a-g
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18291569 2 -  93316391 a-a
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                15762 2 -     19307 A-G
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850720 2 +   8254450 a-g
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34401 2 +     64694 A-G
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9195 2 -     28506 a-G
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6026 1 -      8324 --G
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      9114 2 -     37649 T-A
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141729 2 -    366855 G-G
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35531 1 +     37127 --G
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           6924 2 +     14753 A-G
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mustela_putorius.JH418006.1                               301347 1 -  14710649 --g
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                280567 2 -  10118263 a-g
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1587829 2 -   6019432 a-g
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3903921 2 -   4330536 a-g
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                          73 2 +      1835 A-G
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 C 0
s Nasalis_larvatus.k141_413338                               15170 2 +     21681 a-g
i Nasalis_larvatus.k141_413338                           T 107 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20307612 1 +  31847680 --g
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149503 1 -   9404916 --g
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102586307 2 - 196305487 A-A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              231 2 +      2075 A-A
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761661 2 + 199412804 A-G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1363582 2 +   3988456 a-g
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              506762 1 -   2017862 --g
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462451 1 -    559221 --g
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4223 2 +      8798 A-A
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696386 2 -   1103335 a-a
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    44124 2 +     80009 a-g
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03001836.1                             30049 2 +     51860 a-g
i Pan_troglodytes.NBAG03001836.1                         I 6 I 139
s Panthera_onca.PanOnc_flattened_line_3271                  151264 1 +    230217 --G
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                264473 1 +  18783137 --g
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4721352 1 -   8748460 --g
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183443220 2 + 183742232 a-g
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             6918 2 +     20448 a-g
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563726 2 +  20919399 a-g
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   5662 2 +     41871 a-g
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     8947 2 +     27711 a-g
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  9028 2 +      9205 a-g
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12761 1 -     78924 --G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10195 2 +     13100 A-A
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8601 2 +     25941 A-A
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Piliocolobus_badius.k141_1234363                           43681 2 +     62158 a-g
i Piliocolobus_badius.k141_1234363                       T 87 C 0
s Piliocolobus_gordonorum.k141_381342                        38412 2 +     89929 a-g
i Piliocolobus_gordonorum.k141_381342                    T 103 C 0
s Piliocolobus_kirkii.k141_448987                            39828 2 +     51399 a-g
i Piliocolobus_kirkii.k141_448987                        T 103 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296066 2 -  14605196 a-g
i Piliocolobus_tephrosceles.PDMG02000141.1               T 103 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1865 2 +     22620 G-A
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189131166 2 + 189387572 a-g
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570774 2 +   9816681 a-g
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               73350 2 -     81375 a-g
i Presbytis_comata.k141_677006                           T 103 C 0
s Presbytis_mitrata.k141_1087752                              5170 2 +     19060 a-g
i Presbytis_mitrata.k141_1087752                         T 103 C 0
s Prolemur_simus.MPIZ01000396.1                            2596828 2 -   4620579 a-a
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990810 2 +   2598838 a-a
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29122 2 +     38485 a-a
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1165 2 -     13098 A-A
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26643 2 +     35766 a-a
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4830 2 -     24134 A-A
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28655 2 -     67325 A-A
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4878 2 -      6182 A-A
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            15184 2 -     21811 a-g
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40346 1 +     42204 --G
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22976892 2 +  28871421 a-g
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                6945 2 -      8028 a-g
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20274418 1 -  38429054 --g
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15179 2 -     91421 a-g
i Pygathrix_cinerea.k141_1153803                         T 107 C 0
s Pygathrix_nigripes_b.ctg100                                 7609299 2 +   7812017 a-a
i Pygathrix_nigripes_b.ctg100                               T 107 C 0
s Pygathrix_nigripes_a.k141_215492                             15151 2 -     72585 a-g
i Pygathrix_nigripes_a.k141_215492                         T 107 C 0
s Rhinopithecus_bieti.k119_217274                             6865 2 -     11128 a-g
i Rhinopithecus_bieti.k119_217274                        T 106 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236218 2 - 195417433 a-g
i Rhinopithecus_roxellana.NC_044550.1                    T 100 C 0
s Rhinopithecus_strykeri.ctg102                            7671870 2 +   7961872 a-g
i Rhinopithecus_strykeri.ctg102                          T 106 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87914 2 -     96226 A-G
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               8186 2 -      8359 a-g
i Saguinus_bicolor.k141_2619299                          I 6 C 0
s Saguinus_imperator.k141_2524406                             2144 2 +      2197 a-g
i Saguinus_imperator.k141_2524406                        I 3 C 0
s Saguinus_inustus.k141_699149                               13563 2 +     13640 a-g
i Saguinus_inustus.k141_699149                           I 3 C 0
s Saguinus_labiatus.k141_285685                               8432 2 +      8564 a-g
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469282 2 + 209938924 a-g
i Saguinus_midas.LG03                                    T 477 C 0
s Saguinus_mystax.k141_374627                                 7988 2 -      9399 a-g
i Saguinus_mystax.k141_374627                            T 406 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951135 3 - 121099817 gaa
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23474 3 +     46362 gaa
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               23569 3 +     45824 gaa
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             40248 3 -     64574 gaa
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               3320 3 -     23631 gaa
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 23465 3 -     61129 gaa
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420668 2 -   5703754 a-g
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          55709 2 -     80660 a-g
i Sapajus_macrocephalus.k141_351809                      T 367 C 0
s Semnopithecus_entellus.k141_11662                          19688 2 -     19888 A-G
i Semnopithecus_entellus.k141_11662                      I 4 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26893 2 +     39453 a-g
i Semnopithecus_hypoleucos.k141_1615806                  T 107 C 0
s Semnopithecus_johnii.k141_670120                            7412 2 +     27826 a-g
i Semnopithecus_johnii.k141_670120                       T 106 C 0
s Semnopithecus_priam.k141_638794                             6933 2 -     19483 a-g
i Semnopithecus_priam.k141_638794                        T 107 C 0
s Semnopithecus_schistaceus.k141_1584426                      6999 2 +      7198 a-g
i Semnopithecus_schistaceus.k141_1584426                 I 4 I 15
s Semnopithecus_vetulus.k141_1200928                         15259 2 +     15514 a-g
i Semnopithecus_vetulus.k141_1200928                     I 6 I 15
s Spilogale_gracilis.SpiGra_flattened_line_13525             30848 1 +     97271 --G
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              18434 1 -    196729 --A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6810875 2 +  69701581 a-a
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                10906 2 +     41958 A-G
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118864 2 -    156842 A-G
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387321 2 +    539355 A-G
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               26441 2 +     70052 a-g
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1274 2 -     16117 a-g
i Tarsius_wallacei.k141_254427                           C 0 I 69
s Theropithecus_gelada.CM009954.1                        186428590 2 + 186847797 a-g
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81303 2 +    610378 A-G
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         10984 2 -     20410 a-g
i Trachypithecus_auratus.k141_722599                     T 107 C 0
s Trachypithecus_crepusculus.k141_582567                        98 2 -     12674 a-g
i Trachypithecus_crepusculus.k141_582567                 T 107 C 0
s Trachypithecus_cristatus.k141_580354                       11085 2 +     19930 a-g
i Trachypithecus_cristatus.k141_580354                   T 107 C 0
s Trachypithecus_francoisi.k141_1412647                       7512 2 -     19997 a-g
i Trachypithecus_francoisi.k141_1412647                  T 91 C 0
s Trachypithecus_geei.k141_277701                            47636 2 -     60166 a-g
i Trachypithecus_geei.k141_277701                        T 106 C 0
s Trachypithecus_germaini.k141_912491                        15107 2 -     27529 a-g
i Trachypithecus_germaini.k141_912491                    T 107 C 0
s Trachypithecus_hatinhensis.k141_143409                     15051 2 -     18194 a-g
i Trachypithecus_hatinhensis.k141_143409                 T 107 C 0
s Trachypithecus_laotum.k141_907409                           8779 2 -     21137 a-g
i Trachypithecus_laotum.k141_907409                      T 91 C 0
s Trachypithecus_leucocephalus.k141_587342                    7482 2 -     10723 a-g
i Trachypithecus_leucocephalus.k141_587342               T 91 C 0
s Trachypithecus_melamera.k141_434728                         6638 2 +      9834 a-g
i Trachypithecus_melamera.k141_434728                    T 107 C 0
s Trachypithecus_obscurus.k141_190785                        24951 2 +     32220 a-g
i Trachypithecus_obscurus.k141_190785                    T 107 C 0
s Trachypithecus_phayrei.ctg124                            5939053 2 +   6242583 a-g
i Trachypithecus_phayrei.ctg124                          T 107 C 0
s Trachypithecus_pileatus.k141_2007326                        8305 2 +     20839 a-g
i Trachypithecus_pileatus.k141_2007326                   T 106 C 0
s Ursus_maritimus.KK499267.1                               4850546 1 -   5085361 --g
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  11488 2 +     50397 A-A
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11547 2 +     24756 A-A
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371991 2 -   5488506 a-a
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10899 1 -     43706 --G
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          5475 1 +     86975 --g
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Echinops_telfairi.JH980293.1                            48780689 3 + 111700974 I
e Mus_pahari.LT608297.1                                   31355125 13 -  89631738 T
e Mus_spretus.CM004101.1                                  90752527 13 - 130317789 T
e Mus_musculus.chr8                                       87650466 13 - 129401213 T
e Mus_caroli.LT608237.1                                   84361468 13 - 120012414 T
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      14994 0 +     63895 C
e Xerus_inauris.XerIna_scaffold_2302                          1173 0 +    224448 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   53362 63 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     9343 0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2155690 0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4293354 3 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   6516 8 +      8208 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              105536 0 +    114563 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 72732 9 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Spermophilus_dauricus.KZ294078.1                         1954037 0 -   3870691 C
e Sorex_araneus.JH798187.1                                13651056 93 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               3814 63 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11982 13 -     12148 T
e Scalopus_aquaticus.ScaAqu_scaffold_662                    153257 71 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570728 13 +  90668790 T
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Psammomys_obesus.NESX01036370.1                            10498 13 -     21651 T
e Procavia_capensis.ProCapCap_scaffold_85530                 13455 3 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     28216 0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18194880 13 -  18517816 T
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Oryctolagus_cuniculus.CM000791.1                        67147416 1 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387               9955 3 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80254 13 +    102263 T
e Ondatra_zibethicus.OndZib_scaffold_46174                   25254 13 +     28053 T
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  746945 0 +  11899542 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Nannospalax_galili.KL204047.1                            2034165 0 -   3037898 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189371 9 +    196477 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     71335 0 -     80779 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              5047 0 +     14296 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11260586 13 -  27267610 T
e Microgale_talazaci.MicTal_scaffold_6613                    22438 3 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182348 13 -  29670104 T
e Meriones_unguiculatus.MerUng_scaffold_7390                 32854 13 +    140813 T
e Marmota_marmota.CZRN01000018.1                          33103182 0 -  40650429 C
e Loxodonta_africana.GL010049.1                            4217433 3 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     6537 1 -     14121 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276898 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Ictidomys_tridecemlineatus.JH393364.1                    7520982 0 -   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                      83203 0 +    135385 C
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                1000 3 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20662314 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32699 0 +     78134 C
e Glis_glis.GliGli_scaffold_19807                            31458 0 +     49224 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Fukomys_damarensis.KN121974.1                             850525 0 +   3816255 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3328282 71 -   7059049 I
e Ellobius_talpinus.LOJH01081419.1                             538 13 +      8657 T
e Ellobius_lutescens.LOEQ01008920.1                          20407 13 -    110024 T
e Elephantulus_edwardii.JH947257.1                         1097777 3 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    36491 0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            63648 8 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35856 0 +     51376 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    837171 0 +   1526836 C
e Crocidura_indochinensis.CroInd_scaffold_37019               3028 88 -     19598 I
e Cricetulus_griseus.LT883664.1                           11667673 13 + 224834208 T
e Cricetomys_gambianus.CriGam_scaffold_18520                 50293 0 +     63868 C
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          14519 0 -     20389 C
e Condylura_cristata.JH655891.1                           17548142 67 -  53390261 I
e Colobus_guereza.LG01                                   199948999 41 + 200372422 T
e Choloepus_hoffmanni.KN194906.1                            173497 9 +    839153 I
e Choloepus_didactylus.ChoDid_scaffold_45914                 18421 8 +     19366 I
e Chinchilla_lanigera.JH722012.1                           1252897 0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_138870             641 8 -      8501 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Castor_canadensis.CasCan_scaffold_2074                    137166 0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                    1149 0 -     12242 C
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e CanFam4.chr16                                           17799210 78 -  60362399 I
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      12706 8 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74597 0 -     89534 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     70906 13 +     87051 T

a score=0.000000
s hg38.chrUn_KI270753v1                                       6895 1 +     62944 g
s Acinonyx_jubatus.LLWD01001279.1                           827412 1 -   1699592 c
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510686 1 -  29979442 a
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             79462 1 -    347723 a
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14707 1 -     52922 g
i Allenopithecus_nigroviridis.k141_3361533               C 0 I 116
s Allochrocebus_lhoesti.k141_4309873                         14643 1 -     28001 g
i Allochrocebus_lhoesti.k141_4309873                     C 0 I 96
s Allochrocebus_preussi.k141_1442296                          5139 1 -     18505 g
i Allochrocebus_preussi.k141_1442296                     C 0 I 96
s Allochrocebus_solatus.k141_166128                           5993 1 -     12518 g
i Allochrocebus_solatus.k141_166128                      C 0 I 96
s Alouatta_belzebul.k141_3560514                              7471 1 +     51355 g
i Alouatta_belzebul.k141_3560514                         C 0 I 197
s Alouatta_caraya.k141_1701091                                 593 1 -     36483 g
i Alouatta_caraya.k141_1701091                           C 0 I 183
s Alouatta_discolor.k141_566626                              11228 1 +     28687 a
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1509701                                24858 1 +     25266 g
i Alouatta_juara.k141_1509701                            C 0 I 194
s Alouatta_macconnelli.k141_918386                             773 1 -      9457 a
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_3472759                            18165 1 -     18578 g
i Alouatta_nigerrima.k141_3472759                        C 0 I 194
s Alouatta_palliata.k141_2135620                              3552 1 +     47717 g
i Alouatta_palliata.k141_2135620                         C 0 I 191
s Alouatta_puruensis.k141_362188                               257 1 +      5663 g
i Alouatta_puruensis.k141_362188                         C 0 I 198
s Alouatta_seniculus.k141_117119                             14907 1 +     50774 A
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185458 1 +    412891 A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  15494 1 -     33861 g
i Aotus_azarae.k141_3104676                              C 0 I 201
s Aotus_griseimembra.k141_2240599                            15514 1 -     34016 g
i Aotus_griseimembra.k141_2240599                        C 0 I 217
s Aotus_nancymaae.KZ198451.1                               4297911 1 -   5030052 g
i Aotus_nancymaae.KZ198451.1                             C 0 I 208
s Aotus_trivirgatus.k141_2152450                             15516 1 -     34685 g
i Aotus_trivirgatus.k141_2152450                         C 0 I 213
s Aotus_vociferans.k141_344750                               28640 1 -     47192 g
i Aotus_vociferans.k141_344750                           C 0 I 213
s Arctocebus_calabarensis.k141_2318572                       11562 1 +     14667 T
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4866 1 +     43469 A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  53768 1 -     92717 A
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54395 1 +     85213 A
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             5249 1 -     10423 g
i Callibella_humilis.k141_1278103                        C 0 I 266
s Callimico_goeldii.k141_1091182                             24720 1 +     31915 g
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            5215 1 +      5267 g
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590429 1 - 189096842 g
i Callithrix_jacchus.pat_scaffold_3                      C 0 I 240
s Callithrix_kuhlii.k119_1164682                             11960 1 -     12001 G
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002493 1 -  17673402 a
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334951 1 -   7040546 a
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  403234 1 -   1652518 a
i Camelus_ferus.KB017975.1                               C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    185334 1 -    185531 A
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034720 1 -   9314153 a
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17958985 1 -  59632846 a
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18500497 1 +  63665305 a
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007247396.1                           201436 1 +    308752 g
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5220 1 -     11696 A
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     93130 1 +    217609 A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          9874 1 -     11392 g
i Cebuella_niveiventris.k141_1251222                     C 0 I 276
s Cebuella_pygmaea.k141_1309012                               5972 1 -      7577 g
i Cebuella_pygmaea.k141_1309012                          C 0 I 246
s Cebus_albifrons.Contig27                                25652432 1 +  26074798 g
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_398305                                 1574 1 +      1777 g
i Cebus_olivaceus.k141_398305                            C 0 I 7
s Cebus_unicolor.k141_544048                                 49911 1 -     74725 g
i Cebus_unicolor.k141_544048                             C 0 I 5
s Cephalopachus_bancanus.k141_1423433                         5441 1 +     31688 g
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12231547 1 +  27778364 a
i Ceratotherium_simum.JH767749.1                         C 0 I 9
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2574 1 -     25243 A
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 I 9
s Cercocebus_atys.KQ010504.1                               4475652 1 +   4669795 g
i Cercocebus_atys.KQ010504.1                             C 0 I 96
s Cercocebus_chrysogaster.k141_393940                        14197 1 -     19203 g
i Cercocebus_chrysogaster.k141_393940                    C 0 I 5
s Cercocebus_lunulatus.k141_3342297                            813 1 -     14043 g
i Cercocebus_lunulatus.k141_3342297                      C 0 I 96
s Cercocebus_torquatus.k141_3057011                           8849 1 +     27781 g
i Cercocebus_torquatus.k141_3057011                      C 0 I 93
s Cercopithecus_ascanius.k141_1024104                         9014 1 -     20310 g
i Cercopithecus_ascanius.k141_1024104                    C 0 I 96
s Cercopithecus_cephus.k141_1078548                          11993 1 +     29689 g
i Cercopithecus_cephus.k141_1078548                      C 0 I 97
s Cercopithecus_diana.k141_1150327                            6747 1 -     20078 g
i Cercopithecus_diana.k141_1150327                       C 0 I 96
s Cercopithecus_hamlyni.k141_187466                          14670 1 -     27936 g
i Cercopithecus_hamlyni.k141_187466                      C 0 I 96
s Cercopithecus_lowei.k141_1854285                            3534 1 -     17152 g
i Cercopithecus_lowei.k141_1854285                       C 0 I 96
s Cercopithecus_albogularis.ctg5                                38817073 1 +  39242232 g
i Cercopithecus_albogularis.ctg5                               C 0 I 96
s Cercopithecus_mona.ctg39                                21222765 1 -  21565898 g
i Cercopithecus_mona.ctg39                               C 0 I 96
s Cercopithecus_neglectus.k141_2526306                       39883 1 -     53127 g
i Cercopithecus_neglectus.k141_2526306                   C 0 I 96
s Cercopithecus_nictitans.k141_1119862                         134 1 +     13442 g
i Cercopithecus_nictitans.k141_1119862                   C 0 I 96
s Cercopithecus_petaurista.k141_807961                       14683 1 -     27947 g
i Cercopithecus_petaurista.k141_807961                   C 0 I 96
s Cercopithecus_pogonias.k141_822820                         14659 1 +     17596 g
i Cercopithecus_pogonias.k141_822820                     C 0 I 96
s Cercopithecus_roloway.k141_2581234                           706 1 +     14005 g
i Cercopithecus_roloway.k141_2581234                     C 0 I 96
s Cheirogaleus_major.k141_333249                             21148 1 -     52598 A
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16513 1 +     57038 a
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2206961                            176 1 -     15524 g
i Chiropotes_albinasus.k141_2206961                      T 222 I 240
s Chlorocebus_aethiops.ctg25                              18428643 1 -  18827391 g
i Chlorocebus_aethiops.ctg25                             C 0 I 96
s Chlorocebus_pygerythrus.k141_1025673                       15080 1 -     50209 g
i Chlorocebus_pygerythrus.k141_1025673                   C 0 I 96
s Chlorocebus_sabaeus.CM001947.1                         135422080 1 + 135778131 g
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 96
s Colobus_angolensis.KN981557.1                            1910585 1 +   2368649 g
i Colobus_angolensis.KN981557.1                          C 0 I 103
s Colobus_polykomos.k141_906115                              37119 1 +     84244 g
i Colobus_polykomos.k141_906115                          C 0 I 103
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28599 1 -     87169 A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537364 1 -  12879189 A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630232 1 +  20541912 a
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673398 1 +   1390856 a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 9
s Diceros_bicornis.DicBicMic_scaffold_5955                    6150 1 +    198055 A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 9
s Eidolon_helvum.KE759718.1                                  10635 1 +     11740 a
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Enhydra_lutris.KZ291758.1                               16329420 1 -  41312741 a
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2145829 1 -  14770903 a
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1283652 1 +   4378816 a
i Equus_asinus.JREZ01000139.1                            C 0 I 9
s Equus_caballus.CM000403.2                               18531472 1 -  39960074 a
i Equus_caballus.CM000403.2                              C 0 I 9
s Equus_przewalskii.KK951119.1                               33501 1 +    498745 a
i Equus_przewalskii.KK951119.1                           C 0 I 9
s Erythrocebus_patas.Contig38                             21205250 1 -  21539334 g
i Erythrocebus_patas.Contig38                            C 0 I 96
s Eulemur_albifrons.k141_342033                              13870 1 -     14127 A
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6573 1 -     16928 A
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15597 1 -     25546 A
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12801 1 +     26330 a
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14036 1 +     23973 A
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12798 1 +     75513 a
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10728 1 +     97555 a
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              219 1 +     13026 a
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4272 1 -     17153 A
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13845 1 +    111500 A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237063 1 + 206538554 c
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195906 1 + 205367284 c
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  9650 1 -     36744 C
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     426696 1 -    453645 T
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4386 1 +     11339 t
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            1698 1 +     41679 T
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1267 1 -      9135 g
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 I 1
s Gorilla_beringei.k141_3596273                              16033 1 -     32273 g
i Gorilla_beringei.k141_3596273                          C 0 I 117
s Gorilla_gorilla.LT578341.1                             186338179 1 + 186649187 g
i Gorilla_gorilla.LT578341.1                             C 0 I 108
s Hapalemur_alaotrensis.k141_170648                           6909 1 -     19426 A
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12058 1 -     15286 A
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13697 1 +     18253 a
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13798 1 -     41752 A
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13635 1 -     16460 A
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242432 1 +    327341 A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hoolock_leuconedys.ctg274                                    434845 1 +    630532 g
i Hoolock_leuconedys.ctg274                                 C 0 I 110
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45126 1 +     55795 A
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Indri_indri.k141_3655594                                   22589 1 +     31101 a
i Indri_indri.k141_3655594                               C 0 I 1
s Lasiurus_borealis.LasBor_scaffold_32767                    16477 1 -     42476 A
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15524150 1 -  30322482 A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7511 1 +     64341 g
i Leontocebus_fuscicollis.k141_1820339                   C 0 I 283
s Leontocebus_illigeri.k141_3350179                           4834 1 +      4941 g
i Leontocebus_illigeri.k141_3350179                      C 0 I 5
s Leontocebus_nigricollis.k141_4610752                        7552 1 +     35603 g
i Leontocebus_nigricollis.k141_4610752                   C 0 I 270
s Leontopithecus_chrysomelas.k141_1519602                    29013 1 +     38576 g
i Leontopithecus_chrysomelas.k141_1519602                C 0 I 225
s Leontopithecus_rosalia.k141_464620                         25710 1 +     66356 g
i Leontopithecus_rosalia.k141_464620                     C 0 I 228
s Lepilemur_ankaranensis.k141_596936                         11044 1 -     23766 A
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29105 1 +     45836 A
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1645 1 +     25010 A
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27041 1 +     54090 A
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3043159 1 +   3914936 a
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437199 1 +   1826925 g
i Lophocebus_aterrimus.ctg367                            C 0 I 94
s Loris_lydekkerianus.k141_2539221                            5945 1 +     11245 T
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004765 1 +   6120653 T
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17955225 1 -  59628241 a
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               7009 1 +     40492 g
i Macaca_arctoides.k141_2326796                          C 0 I 100
s Macaca_assamensis.Contig5                               59676268 1 +  60120075 g
i Macaca_assamensis.Contig5                              C 0 I 100
s Macaca_cyclopis.k119_18836                                 12781 1 -     26193 g
i Macaca_cyclopis.k119_18836                             C 0 I 103
s Macaca_fascicularis.k141_814140                            80565 1 -    114318 g
i Macaca_fascicularis.k141_814140                        C 0 I 103
s Macaca_fuscata.k119_255327                                  6256 1 -     23192 g
i Macaca_fuscata.k119_255327                             C 0 I 99
s Macaca_leonina.k141_3550399                                15725 1 -     29190 g
i Macaca_leonina.k141_3550399                            C 0 I 103
s Macaca_maura.k141_2733130                                  24290 1 +     37952 g
i Macaca_maura.k141_2733130                              C 0 I 103
s Macaca_mulatta.NC_041758.1                             186839379 1 + 187317192 g
i Macaca_mulatta.NC_041758.1                             C 0 I 103
s Macaca_nemestrina.KQ007038.1                            25457942 1 -  25927173 g
i Macaca_nemestrina.KQ007038.1                           C 0 I 103
s Macaca_nigra.k141_1655396                                  80138 1 +     89720 g
i Macaca_nigra.k141_1655396                              C 0 I 103
s Macaca_radiata.k141_3680011                                 7139 1 +     20474 g
i Macaca_radiata.k141_3680011                            C 0 I 103
s Macaca_siberu.k141_635500                                   6939 1 -     14993 g
i Macaca_siberu.k141_635500                              C 0 I 103
s Macaca_silenus.Contig273                                  329805 1 -    668171 g
i Macaca_silenus.Contig273                               C 0 I 103
s Macaca_thibetana.k99_256239                                 5255 1 -     24072 g
i Macaca_thibetana.k99_256239                            C 0 I 100
s Macaca_tonkeana.k141_1498238                               25877 1 -     45290 g
i Macaca_tonkeana.k141_1498238                           C 0 I 103
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90728 1 +     94391 A
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23937472 1 -  24302211 g
i Mandrillus_leucophaeus.scaffold280                     C 0 I 96
s Mandrillus_sphinx.Contig270                               351600 1 +    752769 g
i Mandrillus_sphinx.Contig270                            C 0 I 92
s Manis_javanica.JSZB01003497.1                              18603 1 +    737560 a
i Manis_javanica.JSZB01003497.1                          C 0 I 3
s Manis_pentadactyla.KN006162.1                              50592 1 -    317179 a
i Manis_pentadactyla.KN006162.1                          C 0 I 3
s Megaderma_lyra.MegLyr_scaffold_4542                        10437 1 -    207569 A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 2
s Mellivora_capensis.MelCap_flattened_line_69365             10157 1 +     13704 A
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mico_argentatus.k141_1239457                                5789 1 -      7380 g
i Mico_argentatus.k141_1239457                           C 0 I 240
s Mico_humeralifer.k141_1976199                               4862 1 +     18990 g
i Mico_humeralifer.k141_1976199                          C 0 I 5
s Mico_schneideri.k141_1950671                                      5801 1 -      7356 g
i Mico_schneideri.k141_1950671                                 C 0 I 240
s Microcebus_murinus.CM007674.1                           18291571 1 -  93316391 a
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                15764 1 -     19307 G
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850722 1 +   8254450 a
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34403 1 +     64694 A
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9197 1 -     28506 G
i Miopithecus_ogouensis.k141_534055                      C 0 I 80
s Mirounga_angustirostris.MirAng_flattened_line_93702         6027 1 -      8324 A
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      9116 1 -     37649 A
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141731 1 -    366855 A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35532 1 +     37127 A
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           6926 1 +     14753 A
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mustela_putorius.JH418006.1                               301348 1 -  14710649 a
i Mustela_putorius.JH418006.1                            C 0 I 222
s Myotis_brandtii.KE162005.1                                280569 1 -  10118263 a
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1587831 1 -   6019432 a
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3903923 1 -   4330536 a
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                          75 1 +      1835 A
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 C 0
s Nasalis_larvatus.k141_413338                               15172 1 +     21681 g
i Nasalis_larvatus.k141_413338                           C 0 I 107
s Neomonachus_schauinslandi.NINY01007730.1                20307613 1 +  31847680 a
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149504 1 -   9404916 a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102586309 1 - 196305487 T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              233 1 +      2075 T
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761663 1 + 199412804 T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1363584 1 +   3988456 a
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              506763 1 -   2017862 a
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462452 1 -    559221 a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4225 1 +      8798 T
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696388 1 -   1103335 t
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    44126 1 +     80009 g
i Pan_paniscus.KQ411613.1                                C 0 I 113
s Pan_troglodytes.CM009242.2                             189143141 1 + 189151597 g
i Pan_troglodytes.CM009242.2                             I 2 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  151265 1 +    230217 C
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                264474 1 +  18783137 c
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4721353 1 -   8748460 c
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183443222 1 + 183742232 g
i Papio_anubis.CM001495.2                                C 0 I 148
s Papio_cynocephalus.k141_4307930                             6920 1 +     20448 g
i Papio_cynocephalus.k141_4307930                        C 0 I 96
s Papio_hamadryas.Contig39                                20563728 1 +  20919399 g
i Papio_hamadryas.Contig39                               C 0 I 100
s Papio_kindae.k141_1936966                                   5664 1 +     41871 g
i Papio_kindae.k141_1936966                              C 0 I 96
s Papio_papio.k141_802527                                     8949 1 +     27711 g
i Papio_papio.k141_802527                                C 0 I 104
s Papio_ursinus.k141_3428135                                  9030 1 +      9205 g
i Papio_ursinus.k141_3428135                             C 0 I 92
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12762 1 -     78924 C
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10197 1 +     13100 T
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8603 1 +     25941 T
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Piliocolobus_badius.k141_1234363                           43683 1 +     62158 g
i Piliocolobus_badius.k141_1234363                       C 0 I 87
s Piliocolobus_gordonorum.k141_381342                        38414 1 +     89929 g
i Piliocolobus_gordonorum.k141_381342                    C 0 I 103
s Piliocolobus_kirkii.k141_448987                            39830 1 +     51399 g
i Piliocolobus_kirkii.k141_448987                        C 0 I 103
s Piliocolobus_tephrosceles.PDMG02000141.1                14296068 1 -  14605196 g
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 103
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1867 1 +     22620 A
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189131168 1 + 189387572 g
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570776 1 +   9816681 g
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               73352 1 -     81375 g
i Presbytis_comata.k141_677006                           C 0 I 103
s Presbytis_mitrata.k141_1087752                              5172 1 +     19060 g
i Presbytis_mitrata.k141_1087752                         C 0 I 103
s Prolemur_simus.MPIZ01000396.1                            2596830 1 -   4620579 a
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990812 1 +   2598838 a
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29124 1 +     38485 a
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1167 1 -     13098 A
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26645 1 +     35766 a
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4832 1 -     24134 A
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28657 1 -     67325 A
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4880 1 -      6182 A
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            15186 1 -     21811 a
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40347 1 +     42204 A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22976894 1 +  28871421 a
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                6947 1 -      8028 a
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20274419 1 -  38429054 c
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15181 1 -     91421 g
i Pygathrix_cinerea.k141_1153803                         C 0 I 107
s Pygathrix_nigripes_b.ctg100                                 7609301 1 +   7812017 g
i Pygathrix_nigripes_b.ctg100                               C 0 I 107
s Pygathrix_nigripes_a.k141_215492                             15153 1 -     72585 g
i Pygathrix_nigripes_a.k141_215492                         C 0 I 107
s Rhinopithecus_bieti.k119_217274                             6867 1 -     11128 g
i Rhinopithecus_bieti.k119_217274                        C 0 I 106
s Rhinopithecus_roxellana.NC_044550.1                     91236220 1 - 195417433 g
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 100
s Rhinopithecus_strykeri.ctg102                            7671872 1 +   7961872 g
i Rhinopithecus_strykeri.ctg102                          C 0 I 106
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87916 1 -     96226 A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_2619299                               8188 1 -      8359 g
i Saguinus_bicolor.k141_2619299                          C 0 I 7
s Saguinus_imperator.k141_2524406                             2146 1 +      2197 g
i Saguinus_imperator.k141_2524406                        C 0 I 5
s Saguinus_inustus.k141_699149                               13565 1 +     13640 g
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               8434 1 +      8564 g
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469284 1 + 209938924 g
i Saguinus_midas.LG03                                    C 0 I 477
s Saguinus_mystax.k141_374627                                 7990 1 -      9399 g
i Saguinus_mystax.k141_374627                            C 0 I 406
s Saimiri_boliviensis.NW_024100920.1                     119951138 1 - 121099817 a
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23477 1 +     46362 a
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               23572 1 +     45824 a
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             40251 1 -     64574 a
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               3323 1 -     23631 a
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 23468 1 -     61129 a
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420670 1 -   5703754 g
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          55711 1 -     80660 g
i Sapajus_macrocephalus.k141_351809                      C 0 I 368
s Semnopithecus_entellus.k141_11662                          19690 1 -     19888 G
i Semnopithecus_entellus.k141_11662                      C 0 I 5
s Semnopithecus_hypoleucos.k141_1615806                      26895 1 +     39453 g
i Semnopithecus_hypoleucos.k141_1615806                  C 0 I 107
s Semnopithecus_johnii.k141_670120                            7414 1 +     27826 g
i Semnopithecus_johnii.k141_670120                       C 0 I 106
s Semnopithecus_priam.k141_638794                             6935 1 -     19483 g
i Semnopithecus_priam.k141_638794                        C 0 I 107
s Semnopithecus_schistaceus.k141_1572284                       343 1 -     12762 G
i Semnopithecus_schistaceus.k141_1572284                 I 2 C 0
s Semnopithecus_vetulus.k141_910252                            204 1 +     13763 G
i Semnopithecus_vetulus.k141_910252                      I 2 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30849 1 +     97271 A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 6
s Suricata_suricatta.SurSur_flattened_line_6629              18435 1 -    196729 A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6810877 1 +  69701581 a
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                10908 1 +     41958 A
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118866 1 -    156842 A
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 9
s Tapirus_terrestris.TapTer_scaffold_755                    387323 1 +    539355 A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 9
s Tarsius_lariang.k141_2201908                               26443 1 +     70052 g
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1345 1 -     16117 a
i Tarsius_wallacei.k141_254427                           I 69 C 0
s Theropithecus_gelada.CM009954.1                        186428592 1 + 186847797 g
i Theropithecus_gelada.CM009954.1                        C 0 I 96
s Tonatia_saurophila.TonSau_scaffold_294                     81305 1 +    610378 A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         10986 1 -     20410 g
i Trachypithecus_auratus.k141_722599                     C 0 I 107
s Trachypithecus_crepusculus.k141_582567                       100 1 -     12674 g
i Trachypithecus_crepusculus.k141_582567                 C 0 I 107
s Trachypithecus_cristatus.k141_580354                       11087 1 +     19930 g
i Trachypithecus_cristatus.k141_580354                   C 0 I 107
s Trachypithecus_francoisi.k141_1412647                       7514 1 -     19997 g
i Trachypithecus_francoisi.k141_1412647                  C 0 I 91
s Trachypithecus_geei.k141_277701                            47638 1 -     60166 g
i Trachypithecus_geei.k141_277701                        C 0 I 106
s Trachypithecus_germaini.k141_912491                        15109 1 -     27529 g
i Trachypithecus_germaini.k141_912491                    C 0 I 107
s Trachypithecus_hatinhensis.k141_143409                     15053 1 -     18194 g
i Trachypithecus_hatinhensis.k141_143409                 C 0 I 107
s Trachypithecus_laotum.k141_907409                           8781 1 -     21137 g
i Trachypithecus_laotum.k141_907409                      C 0 I 91
s Trachypithecus_leucocephalus.k141_587342                    7484 1 -     10723 g
i Trachypithecus_leucocephalus.k141_587342               C 0 I 91
s Trachypithecus_melamera.k141_434728                         6640 1 +      9834 g
i Trachypithecus_melamera.k141_434728                    C 0 I 107
s Trachypithecus_obscurus.k141_190785                        24953 1 +     32220 g
i Trachypithecus_obscurus.k141_190785                    C 0 I 107
s Trachypithecus_phayrei.ctg124                            5939055 1 +   6242583 g
i Trachypithecus_phayrei.ctg124                          C 0 I 107
s Trachypithecus_pileatus.k141_2007326                        8307 1 +     20839 g
i Trachypithecus_pileatus.k141_2007326                   C 0 I 106
s Ursus_maritimus.KK499267.1                               4850547 1 -   5085361 a
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  11490 1 +     50397 A
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11549 1 +     24756 A
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371993 1 -   5488506 a
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10900 1 -     43706 A
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          5476 1 +     86975 a
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Echinops_telfairi.JH980293.1                            48780689 3 + 111700974 I
e Mus_pahari.LT608297.1                                   31355125 13 -  89631738 T
e Mus_spretus.CM004101.1                                  90752527 13 - 130317789 T
e Mus_musculus.chr8                                       87650466 13 - 129401213 T
e Mus_caroli.LT608237.1                                   84361468 13 - 120012414 T
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      14994 0 +     63895 C
e Xerus_inauris.XerIna_scaffold_2302                          1173 0 +    224448 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   53362 63 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     9343 0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2155690 0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4293354 3 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   6516 8 +      8208 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              105536 0 +    114563 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 72732 9 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Spermophilus_dauricus.KZ294078.1                         1954037 0 -   3870691 C
e Sorex_araneus.JH798187.1                                13651056 93 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               3814 63 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11982 13 -     12148 T
e Scalopus_aquaticus.ScaAqu_scaffold_662                    153257 71 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570728 13 +  90668790 T
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Psammomys_obesus.NESX01036370.1                            10498 13 -     21651 T
e Procavia_capensis.ProCapCap_scaffold_85530                 13455 3 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     28216 0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18194880 13 -  18517816 T
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Oryctolagus_cuniculus.CM000791.1                        67147416 1 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387               9955 3 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80254 13 +    102263 T
e Ondatra_zibethicus.OndZib_scaffold_46174                   25254 13 +     28053 T
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  746945 0 +  11899542 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Nannospalax_galili.KL204047.1                            2034165 0 -   3037898 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189371 9 +    196477 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     71335 0 -     80779 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              5047 0 +     14296 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11260586 13 -  27267610 T
e Microgale_talazaci.MicTal_scaffold_6613                    22438 3 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182348 13 -  29670104 T
e Meriones_unguiculatus.MerUng_scaffold_7390                 32854 13 +    140813 T
e Marmota_marmota.CZRN01000018.1                          33103182 0 -  40650429 C
e Loxodonta_africana.GL010049.1                            4217433 3 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     6537 1 -     14121 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276898 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Ictidomys_tridecemlineatus.JH393364.1                    7520982 0 -   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                      83203 0 +    135385 C
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                1000 3 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20662314 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32699 0 +     78134 C
e Glis_glis.GliGli_scaffold_19807                            31458 0 +     49224 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Fukomys_damarensis.KN121974.1                             850525 0 +   3816255 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3328282 71 -   7059049 I
e Ellobius_talpinus.LOJH01081419.1                             538 13 +      8657 T
e Ellobius_lutescens.LOEQ01008920.1                          20407 13 -    110024 T
e Elephantulus_edwardii.JH947257.1                         1097777 3 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    36491 0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            63648 8 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35856 0 +     51376 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    837171 0 +   1526836 C
e Crocidura_indochinensis.CroInd_scaffold_37019               3028 88 -     19598 I
e Cricetulus_griseus.LT883664.1                           11667673 13 + 224834208 T
e Cricetomys_gambianus.CriGam_scaffold_18520                 50293 0 +     63868 C
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          14519 0 -     20389 C
e Condylura_cristata.JH655891.1                           17548142 67 -  53390261 I
e Colobus_guereza.LG01                                   199948999 41 + 200372422 T
e Choloepus_hoffmanni.KN194906.1                            173497 9 +    839153 I
e Choloepus_didactylus.ChoDid_scaffold_45914                 18421 8 +     19366 I
e Chinchilla_lanigera.JH722012.1                           1252897 0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_138870             641 8 -      8501 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Castor_canadensis.CasCan_scaffold_2074                    137166 0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                    1149 0 -     12242 C
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e CanFam4.chr16                                           17799210 78 -  60362399 I
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      12706 8 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74597 0 -     89534 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     70906 13 +     87051 T

a score=0.000000
s hg38.chrUn_KI270753v1                                       6896  5 +     62944 a------------------------g---ag-a
s Acinonyx_jubatus.LLWD01001279.1                           827413  1 -   1699592 a--------------------------------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510687  1 -  29979442 a--------------------------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             79463  1 -    347723 a--------------------------------
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14824  8 -     52922 a------------------------aaagag-a
i Allenopithecus_nigroviridis.k141_3361533               I 116 T 119
s Allochrocebus_lhoesti.k141_4309873                         14740  8 -     28001 a------------------------aaagag-a
i Allochrocebus_lhoesti.k141_4309873                     I 96 T 99
s Allochrocebus_preussi.k141_1442296                          5236  8 -     18505 a------------------------aaagag-a
i Allochrocebus_preussi.k141_1442296                     I 96 T 99
s Allochrocebus_solatus.k141_166128                           6090  8 -     12518 a------------------------aaagag-a
i Allochrocebus_solatus.k141_166128                      I 96 T 99
s Alouatta_belzebul.k141_3560514                              7669  5 +     51355 a------------------------a---ag-a
i Alouatta_belzebul.k141_3560514                         I 197 T 197
s Alouatta_caraya.k141_1701091                                 777  5 -     36483 a------------------------a---ag-a
i Alouatta_caraya.k141_1701091                           I 183 T 183
s Alouatta_discolor.k141_566626                              11229  5 +     28687 a------------------------a---ag-a
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1509701                                25053  5 +     25266 a------------------------a---ag-a
i Alouatta_juara.k141_1509701                            I 194 T 194
s Alouatta_macconnelli.k141_918386                             774  5 -      9457 a------------------------a---ag-a
i Alouatta_macconnelli.k141_918386                       C 0 T 194
s Alouatta_nigerrima.k141_3472759                            18360  5 -     18578 a------------------------a---ag-a
i Alouatta_nigerrima.k141_3472759                        I 194 T 194
s Alouatta_palliata.k141_2135620                              3744  5 +     47717 a------------------------a---ag-a
i Alouatta_palliata.k141_2135620                         I 191 T 191
s Alouatta_puruensis.k141_362188                               456  5 +      5663 a------------------------a---ag-a
i Alouatta_puruensis.k141_362188                         I 198 T 198
s Alouatta_seniculus.k141_117119                             14908  5 +     50774 A------------------------A---AG-A
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185459  1 +    412891 A--------------------------------
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  15696  5 -     33861 a------------------------a---ag-a
i Aotus_azarae.k141_3104676                              I 201 T 201
s Aotus_griseimembra.k141_2240599                            15732  5 -     34016 a------------------------a---ag-a
i Aotus_griseimembra.k141_2240599                        I 217 T 217
s Aotus_nancymaae.KZ198451.1                               4298120  5 -   5030052 a------------------------a---ag-a
i Aotus_nancymaae.KZ198451.1                             I 208 T 208
s Aotus_trivirgatus.k141_2152450                             15730  5 -     34685 a------------------------a---ag-a
i Aotus_trivirgatus.k141_2152450                         I 213 T 213
s Aotus_vociferans.k141_344750                               28854  5 -     47192 a------------------------a---ag-a
i Aotus_vociferans.k141_344750                           I 213 T 213
s Arctocebus_calabarensis.k141_2318572                       11563  5 +     14667 A------------------------G---AA-A
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4867  1 +     43469 A--------------------------------
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  53769  5 -     92717 A------------------------G---AA-A
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54396  5 +     85213 A------------------------G---AA-A
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             5516  5 -     10423 a------------------------a---ag-a
i Callibella_humilis.k141_1278103                        I 266 T 266
s Callimico_goeldii.k141_1091182                             24721  5 +     31915 g------------------------a---gg-g
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            5216  5 +      5267 c------------------------a---gg-g
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590670  5 - 189096842 a------------------------a---ag-a
i Callithrix_jacchus.pat_scaffold_3                      I 240 T 240
s Callithrix_kuhlii.k119_1164682                             11961  5 -     12001 G------------------------A---GG-G
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1149  4 -     12242 -------------------------T---GA-G
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 1
s Camelus_bactrianus.KN276810.1                           10002494  1 -  17673402 a--------------------------------
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334952  1 -   7040546 a--------------------------------
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  403235  1 -   1652518 a--------------------------------
i Camelus_ferus.KB017975.1                               C 0 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    185335  1 -    185531 A--------------------------------
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034721  1 -   9314153 a--------------------------------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17958986  1 -  59632846 a--------------------------------
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18500498  1 +  63665305 a--------------------------------
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007247396.1                           201437  5 +    308752 a------------------------a---gg-a
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137166  4 +    179628 -------------------------G---GA-A
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 1
s Carollia_perspicillata.CarPer_scaffold_92756                5221  1 -     11696 A--------------------------------
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     93131  1 +    217609 A--------------------------------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                         10151  5 -     11392 a------------------------a---ag-a
i Cebuella_niveiventris.k141_1251222                     I 276 T 276
s Cebuella_pygmaea.k141_1309012                               6219  5 -      7577 a------------------------a---ag-a
i Cebuella_pygmaea.k141_1309012                          I 246 T 246
s Cebus_albifrons.Contig27                                25652433  5 +  26074798 a------------------------a---gg-g
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                 826  5 +     28840 a------------------------a---ag-a
i Cebus_olivaceus.k141_1764483                           I 4 T 416
s Cebus_unicolor.k141_1837183                                  551  5 +     14051 a------------------------a---ag-a
i Cebus_unicolor.k141_1837183                            I 3 I 3
s Cephalopachus_bancanus.k141_1423433                         5442  5 +     31688 a------------------------a---gg-a
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12231557  1 +  27778364 a--------------------------------
i Ceratotherium_simum.JH767749.1                         I 9 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2584  1 -     25243 A--------------------------------
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 9 C 0
s Cercocebus_atys.KQ010504.1                               4475749  8 +   4669795 a------------------------aaagag-a
i Cercocebus_atys.KQ010504.1                             I 96 T 99
s Cercocebus_chrysogaster.k141_1540778                         253  8 +     17872 a------------------------aaagag-a
i Cercocebus_chrysogaster.k141_1540778                   I 11 I 3
s Cercocebus_lunulatus.k141_3342297                            910  8 -     14043 a------------------------aaagag-a
i Cercocebus_lunulatus.k141_3342297                      I 96 T 99
s Cercocebus_torquatus.k141_3057011                           8943  8 +     27781 a------------------------aaagag-a
i Cercocebus_torquatus.k141_3057011                      I 93 T 96
s Cercopithecus_ascanius.k141_1024104                         9111  8 -     20310 a------------------------aaagag-a
i Cercopithecus_ascanius.k141_1024104                    I 96 T 99
s Cercopithecus_cephus.k141_1078548                          12091  8 +     29689 a------------------------aaagag-a
i Cercopithecus_cephus.k141_1078548                      I 97 T 100
s Cercopithecus_diana.k141_1150327                            6844  8 -     20078 a------------------------aaagag-a
i Cercopithecus_diana.k141_1150327                       I 96 T 99
s Cercopithecus_hamlyni.k141_187466                          14767  8 -     27936 a------------------------aaagag-a
i Cercopithecus_hamlyni.k141_187466                      I 96 T 99
s Cercopithecus_lowei.k141_1854285                            3631  8 -     17152 a------------------------agagag-a
i Cercopithecus_lowei.k141_1854285                       I 96 T 99
s Cercopithecus_albogularis.ctg5                                38817170  8 +  39242232 a------------------------aaagag-a
i Cercopithecus_albogularis.ctg5                               I 96 T 99
s Cercopithecus_mona.ctg39                                21222862  8 -  21565898 a------------------------agagag-a
i Cercopithecus_mona.ctg39                               I 96 T 99
s Cercopithecus_neglectus.k141_2526306                       39980  8 -     53127 a------------------------agagag-a
i Cercopithecus_neglectus.k141_2526306                   I 96 T 99
s Cercopithecus_nictitans.k141_1119862                         231  8 +     13442 a------------------------aaagag-a
i Cercopithecus_nictitans.k141_1119862                   I 96 T 99
s Cercopithecus_petaurista.k141_807961                       14780  8 -     27947 a------------------------agagag-a
i Cercopithecus_petaurista.k141_807961                   I 96 T 99
s Cercopithecus_pogonias.k141_822820                         14756  8 +     17596 a------------------------agagag-a
i Cercopithecus_pogonias.k141_822820                     I 96 T 99
s Cercopithecus_roloway.k141_2581234                           803  8 +     14005 a------------------------aaagag-a
i Cercopithecus_roloway.k141_2581234                     I 96 T 99
s Cheirogaleus_major.k141_333249                             21149  5 -     52598 A------------------------G---AA-A
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16514  5 +     57038 a------------------------g---aa-a
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1252897  4 +   2543920 -------------------------a---ga-a
i Chinchilla_lanigera.JH722012.1                         C 0 I 1
s Chiropotes_albinasus.k141_2206961                            417  5 -     15524 a------------------------a---ag-a
i Chiropotes_albinasus.k141_2206961                      I 240 T 240
s Chlorocebus_aethiops.ctg25                              18428740  8 -  18827391 a------------------------aaagaG-a
i Chlorocebus_aethiops.ctg25                             I 96 T 99
s Chlorocebus_pygerythrus.k141_1025673                       15177  8 -     50209 a------------------------aaagag-a
i Chlorocebus_pygerythrus.k141_1025673                   I 96 T 99
s Chlorocebus_sabaeus.CM001947.1                         135422177  8 + 135778131 a------------------------aaagag-a
i Chlorocebus_sabaeus.CM001947.1                         I 96 T 99
s Colobus_angolensis.KN981557.1                            1910689  8 +   2368649 a------------------------aaagag-a
i Colobus_angolensis.KN981557.1                          I 103 T 106
s Colobus_polykomos.k141_906115                              37223  8 +     84244 a------------------------aaagag-a
i Colobus_polykomos.k141_906115                          I 103 T 106
s Ctenodactylus_gundi.CteGun_scaffold_65                    837171  4 +   1526836 -------------------------G---GG-A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 1
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35856  4 +     51376 -------------------------G---GA-A
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 1
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14519  1 -     20389 A--------------------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28600  1 -     87169 A--------------------------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537365  5 -  12879189 A------------------------G---AA-A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36491  4 +     67921 -------------------------A---GA-A
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 1
s Desmodus_rotundus.KZ672289.1                             8630233  1 +  20541912 a--------------------------------
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673408  1 +   1390856 a--------------------------------
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 9 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6160  1 +    198055 A--------------------------------
i Diceros_bicornis.DicBicMic_scaffold_5955               I 9 C 0
s Eidolon_helvum.KE759718.1                                  10636  1 +     11740 a--------------------------------
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Enhydra_lutris.KZ291758.1                               16329421  1 -  41312741 a--------------------------------
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2145830  1 -  14770903 a--------------------------------
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1283662  1 +   4378816 a--------------------------------
i Equus_asinus.JREZ01000139.1                            I 9 C 0
s Equus_caballus.CM000403.2                               18531482  1 -  39960074 a--------------------------------
i Equus_caballus.CM000403.2                              I 9 C 0
s Equus_przewalskii.KK951119.1                               33511  1 +    498745 a--------------------------------
i Equus_przewalskii.KK951119.1                           I 9 C 0
s Erythrocebus_patas.Contig38                             21205347  6 -  21539334 a------------------------aaa--g-a
i Erythrocebus_patas.Contig38                            I 96 T 97
s Eulemur_albifrons.k141_342033                              13871  1 -     14127 A--------------------------------
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6574  5 -     16928 A------------------------G---AA-A
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15598  5 -     25546 A------------------------G---AA-A
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12802  5 +     26330 a------------------------g---aa-a
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14037  5 +     23973 A------------------------G---AA-A
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12799  5 +     75513 a------------------------g---aa-a
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10729  5 +     97555 a------------------------g---aa-a
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              220  5 +     13026 a------------------------g---aa-a
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4273  5 -     17153 A------------------------G---AA-A
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13846  5 +    111500 A------------------------G---AA-A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Fukomys_damarensis.KN121974.1                             850525  4 +   3816255 -------------------------g---ga-g
i Fukomys_damarensis.KN121974.1                          C 0 I 1
s Felis_catus.CM001381.2                                  20237064  1 + 206538554 a--------------------------------
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195907  1 + 205367284 a--------------------------------
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  9651  1 -     36744 A--------------------------------
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     426697  5 -    453645 A------------------------G---AA-A
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4387  5 +     11339 a------------------------g---aa-a
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1269  5 -      9135 a------------------------g---gg-a
i Galeopterus_variegatus.GalVar_scaffold_108840          I 1 C 0
s Glis_glis.GliGli_scaffold_19807                            31458  4 +     49224 -------------------------G---TG-A
i Glis_glis.GliGli_scaffold_19807                        C 0 I 1
s Gorilla_beringei.k141_3596273                              16151  5 -     32273 a------------------------g---ag-a
i Gorilla_beringei.k141_3596273                          I 117 C 0
s Gorilla_gorilla.LT578341.1                             186338288  5 + 186649187 a------------------------g---ag-a
i Gorilla_gorilla.LT578341.1                             I 108 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   32699  4 +     78134 -------------------------G---GA-G
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 1
s Hapalemur_alaotrensis.k141_170648                           6910  5 -     19426 A------------------------G---AA-A
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12059  5 -     15286 A------------------------G---AA-A
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13698  5 +     18253 a------------------------g---aa-a
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13799  5 -     41752 A------------------------G---AA-A
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13636  5 -     16460 A------------------------G---AA-A
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20662314  4 +  22651954 -------------------------g---ga-g
i Heterocephalus_glaber.JH602082.1                       C 0 I 1
s Helogale_parvula.HelPar_flattened_line_2585               242433  1 +    327341 A--------------------------------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hoolock_leuconedys.ctg274                                    434956  5 +    630532 a------------------------g---ag-a
i Hoolock_leuconedys.ctg274                                 I 110 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83203  4 +    135385 -------------------------A---GA-G
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 1
s Ictidomys_tridecemlineatus.JH393364.1                    7520982  4 -   7955117 -------------------------g---ag-a
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 1
s Indri_indri.k141_3655594                                   22591  4 +     31101 -------------------------g---aa-a
i Indri_indri.k141_3655594                               I 1 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45127  1 +     55795 A--------------------------------
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    16478  1 -     42476 A--------------------------------
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15524151  5 -  30322482 A------------------------G---AA-A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7795  5 +     64341 a------------------------a---ag-a
i Leontocebus_fuscicollis.k141_1820339                   I 283 T 283
s Leontocebus_illigeri.k141_1304848                            135  5 -     35062 a------------------------a---ag-a
i Leontocebus_illigeri.k141_1304848                      I 3 I 3
s Leontocebus_nigricollis.k141_4610752                        7823  5 +     35603 a------------------------a---ag-a
i Leontocebus_nigricollis.k141_4610752                   I 270 T 270
s Leontopithecus_chrysomelas.k141_1519602                    29239  5 +     38576 a------------------------c---ag-a
i Leontopithecus_chrysomelas.k141_1519602                I 225 T 225
s Leontopithecus_rosalia.k141_464620                         25939  5 +     66356 a------------------------t---cg-a
i Leontopithecus_rosalia.k141_464620                     I 228 T 228
s Lepus_americanus.LepAme_scaffold_107385                     6538  1 -     14121 --------------------------------a
i Lepus_americanus.LepAme_scaffold_107385                I 1 C 0
s Lepilemur_ankaranensis.k141_596936                         11045  3 -     23766 A------------------------G---A---
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29106  3 +     45836 A------------------------G---A---
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1646  3 +     25010 A------------------------G---A---
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27042  3 +     54090 A------------------------G---A---
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3043160  1 +   3914936 a--------------------------------
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437294  8 +   1826925 a------------------------aaagag-a
i Lophocebus_aterrimus.ctg367                            I 94 T 97
s Loris_lydekkerianus.k141_2539221                            5946  5 +     11245 A------------------------G---AA-A
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004766  5 +   6120653 A------------------------G---AA-A
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17955226  1 -  59628241 a--------------------------------
i Lycaon_pictus.CM007581.1                               C 0 I 211
s Macaca_arctoides.k141_2326796                               7110  8 +     40492 a------------------------aaagag-a
i Macaca_arctoides.k141_2326796                          I 100 T 103
s Macaca_assamensis.Contig5                               59676369  8 +  60120075 a------------------------aaagag-a
i Macaca_assamensis.Contig5                              I 100 T 103
s Macaca_cyclopis.k119_18836                                 12885  8 -     26193 a------------------------aaagag-a
i Macaca_cyclopis.k119_18836                             I 103 T 106
s Macaca_fascicularis.k141_814140                            80669  8 -    114318 a------------------------aaagag-a
i Macaca_fascicularis.k141_814140                        I 103 T 106
s Macaca_fuscata.k119_255327                                  6356  8 -     23192 a------------------------aaagag-a
i Macaca_fuscata.k119_255327                             I 99 T 102
s Macaca_leonina.k141_3550399                                15829  8 -     29190 a------------------------aaagag-a
i Macaca_leonina.k141_3550399                            I 103 T 106
s Macaca_maura.k141_2733130                                  24394  8 +     37952 a------------------------aaagag-a
i Macaca_maura.k141_2733130                              I 103 T 106
s Macaca_mulatta.NC_041758.1                             186839483  8 + 187317192 a------------------------aaagag-a
i Macaca_mulatta.NC_041758.1                             I 103 T 106
s Macaca_nemestrina.KQ007038.1                            25458046  8 -  25927173 a------------------------aaagag-a
i Macaca_nemestrina.KQ007038.1                           I 103 T 106
s Macaca_nigra.k141_1655396                                  80242  8 +     89720 a------------------------aaagag-a
i Macaca_nigra.k141_1655396                              I 103 T 106
s Macaca_radiata.k141_3680011                                 7243  8 +     20474 a------------------------aaagag-a
i Macaca_radiata.k141_3680011                            I 103 T 106
s Macaca_siberu.k141_635500                                   7043  8 -     14993 a------------------------aaagag-a
i Macaca_siberu.k141_635500                              I 103 T 106
s Macaca_silenus.Contig273                                  329909  8 -    668171 a------------------------aaagag-a
i Macaca_silenus.Contig273                               I 103 T 106
s Macaca_thibetana.k99_256239                                 5356  8 -     24072 a------------------------aaagag-a
i Macaca_thibetana.k99_256239                            I 100 T 103
s Macaca_tonkeana.k141_1498238                               25981  8 -     45290 a------------------------aaagag-a
i Macaca_tonkeana.k141_1498238                           I 103 T 106
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90729  1 +     94391 A--------------------------------
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23937569  8 -  24302211 a------------------------aaagag-a
i Mandrillus_leucophaeus.scaffold280                     I 96 T 99
s Mandrillus_sphinx.Contig270                               351693  8 +    752769 a------------------------aaagag-a
i Mandrillus_sphinx.Contig270                            I 92 T 95
s Marmota_marmota.CZRN01000018.1                          33103182  4 -  40650429 -------------------------g---ag-g
i Marmota_marmota.CZRN01000018.1                         C 0 I 1
s Manis_javanica.JSZB01003497.1                              18607  1 +    737560 a--------------------------------
i Manis_javanica.JSZB01003497.1                          I 3 C 0
s Manis_pentadactyla.KN006162.1                              50596  1 -    317179 a--------------------------------
i Manis_pentadactyla.KN006162.1                          I 3 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        10440  1 -    207569 A--------------------------------
i Megaderma_lyra.MegLyr_scaffold_4542                    I 2 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10158  1 +     13704 A--------------------------------
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mico_argentatus.k141_1239457                                6030  5 -      7380 a------------------------a---ag-a
i Mico_argentatus.k141_1239457                           I 240 T 240
s Mico_humeralifer.k141_2457295                                259  5 +      1079 a------------------------a---ag-a
i Mico_humeralifer.k141_2457295                          I 23 I 6
s Mico_schneideri.k141_1950671                                      6042  5 -      7356 a------------------------a---ag-a
i Mico_schneideri.k141_1950671                                 I 240 T 240
s Microcebus_murinus.CM007674.1                           18291572  5 -  93316391 a------------------------g---ga-a
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                15765  1 -     19307 A--------------------------------
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850723  1 +   8254450 a--------------------------------
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34404  1 +     64694 A--------------------------------
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9278  8 -     28506 a------------------------aaagag-a
i Miopithecus_ogouensis.k141_534055                      I 80 T 83
s Mirounga_angustirostris.MirAng_flattened_line_93702         6028  1 -      8324 A--------------------------------
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      9117  5 -     37649 A------------------------G---AA-A
i Mirza_zaza.k141_952172                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              5047  4 +     14296 -------------------------G---GG-A
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 1
s Myocastor_coypus.MyoCoy_scaffold_10123                     71335  4 -     80779 -------------------------G---GA-A
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 I 1
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141732  1 -    366855 A--------------------------------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35533  1 +     37127 A--------------------------------
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           6927  1 +     14753 A--------------------------------
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mustela_putorius.JH418006.1                               301571  1 -  14710649 a--------------------------------
i Mustela_putorius.JH418006.1                            I 222 C 0
s Myotis_brandtii.KE162005.1                                280570  1 -  10118263 a--------------------------------
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1587832  1 -   6019432 a--------------------------------
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3903924  1 -   4330536 a--------------------------------
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                          76  1 +      1835 A--------------------------------
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 C 0
s Nasalis_larvatus.k141_413338                               15280  8 +     21681 a------------------------aaagag-a
i Nasalis_larvatus.k141_413338                           I 107 T 110
s Neomonachus_schauinslandi.NINY01007730.1                20307614  1 +  31847680 a--------------------------------
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149505  1 -   9404916 a--------------------------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102586310  5 - 196305487 A------------------------G---AA-A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              234  5 +      2075 A------------------------g---aa-a
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761664  5 + 199412804 A------------------------G---AA-A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1363585 30 +   3988456 aagggaagaagaaagtaggaaggaaa---ggaa
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  746945  4 +  11899542 -------------------------g---ga-a
i Octodon_degus.JH651603.1                               C 0 I 1
s Oryctolagus_cuniculus.CM000791.1                        67147417  1 + 174332312 --------------------------------a
i Oryctolagus_cuniculus.CM000791.1                       I 1 C 0
s Odobenus_rosmarus.KB229312.1                              506764  1 -   2017862 a--------------------------------
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462453  1 -    559221 a--------------------------------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4226  5 +      8798 A------------------------G---AA-A
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696389  5 -   1103335 a------------------------g---aa-a
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    44240  5 +     80009 a------------------------g---ag-a
i Pan_paniscus.KQ411613.1                                I 113 C 0
s Pan_troglodytes.CM009242.2                             189143142  5 + 189151597 a------------------------g---ag-a
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  151266  1 +    230217 A--------------------------------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                264475  1 +  18783137 a--------------------------------
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4721354  1 -   8748460 a--------------------------------
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183443371  8 + 183742232 a------------------------aaagag-a
i Papio_anubis.CM001495.2                                I 148 T 151
s Papio_cynocephalus.k141_4307930                             7017  8 +     20448 a------------------------aaagag-a
i Papio_cynocephalus.k141_4307930                        I 96 T 99
s Papio_hamadryas.Contig39                                20563829  8 +  20919399 a------------------------aaagag-a
i Papio_hamadryas.Contig39                               I 100 T 103
s Papio_kindae.k141_1936966                                   5761  8 +     41871 a------------------------aaagag-a
i Papio_kindae.k141_1936966                              I 96 T 99
s Papio_papio.k141_802527                                     9054  8 +     27711 a------------------------aaagag-a
i Papio_papio.k141_802527                                I 104 T 107
s Papio_ursinus.k141_3428135                                  9123  8 +      9205 a------------------------aaagag-a
i Papio_ursinus.k141_3428135                             I 92 T 95
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12763  1 -     78924 A--------------------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10198  5 +     13100 A------------------------G---AA-A
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8604  5 +     25941 A------------------------G---AA-A
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28216  4 -     29689 -------------------------G---GA-G
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Piliocolobus_badius.k141_1234363                           43771  8 +     62158 a------------------------aaagag-a
i Piliocolobus_badius.k141_1234363                       I 87 T 90
s Piliocolobus_gordonorum.k141_381342                        38518  8 +     89929 a------------------------aaagag-a
i Piliocolobus_gordonorum.k141_381342                    I 103 T 106
s Piliocolobus_kirkii.k141_448987                            39934  8 +     51399 a------------------------aaagag-a
i Piliocolobus_kirkii.k141_448987                        I 103 T 106
s Piliocolobus_tephrosceles.PDMG02000141.1                14296172  8 -  14605196 a------------------------aaagag-a
i Piliocolobus_tephrosceles.PDMG02000141.1               I 103 T 106
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1868  1 +     22620 A--------------------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189131169  5 + 189387572 a------------------------a---gg-g
i Pongo_abelii.CM009266.2                                C 0 I 109
s Pongo_pygmaeus.ctg66                                     9570777  5 +   9816681 a------------------------a---gg-g
i Pongo_pygmaeus.ctg66                                   C 0 I 108
s Presbytis_comata.k141_677006                               73456  8 -     81375 a------------------------aaagag-a
i Presbytis_comata.k141_677006                           I 103 T 106
s Presbytis_mitrata.k141_1087752                              5276  8 +     19060 a------------------------aaagag-a
i Presbytis_mitrata.k141_1087752                         I 103 T 106
s Prolemur_simus.MPIZ01000396.1                            2596831  5 -   4620579 a------------------------g---aa-a
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990813  5 +   2598838 a------------------------g---aa-a
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29125  5 +     38485 a------------------------g---aa-a
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1168  5 -     13098 A------------------------G---AA-A
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26646  5 +     35766 a------------------------g---aa-a
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4833  5 -     24134 A------------------------G---AA-A
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28658  5 -     67325 A------------------------G---AA-A
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4881  5 -      6182 A------------------------G---AA-A
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            15187  1 -     21811 a--------------------------------
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40348  1 +     42204 A--------------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22976895  1 +  28871421 a--------------------------------
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                6948  1 -      8028 a--------------------------------
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20274420  1 -  38429054 a--------------------------------
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15289  8 -     91421 a------------------------aaagag-a
i Pygathrix_cinerea.k141_1153803                         I 107 T 110
s Pygathrix_nigripes_b.ctg100                                 7609409  8 +   7812017 a------------------------aaagag-a
i Pygathrix_nigripes_b.ctg100                               I 107 T 110
s Pygathrix_nigripes_a.k141_215492                             15261  8 -     72585 a------------------------aaaGag-a
i Pygathrix_nigripes_a.k141_215492                         I 107 T 110
s Rhinopithecus_bieti.k119_217274                             6974  6 -     11128 a------------------------a--gag-a
i Rhinopithecus_bieti.k119_217274                        I 106 T 107
s Rhinopithecus_roxellana.NC_044550.1                     91236321  8 - 195417433 a------------------------aaagag-a
i Rhinopithecus_roxellana.NC_044550.1                    I 100 T 103
s Rhinopithecus_strykeri.ctg102                            7671979  6 +   7961872 a------------------------a--gag-a
i Rhinopithecus_strykeri.ctg102                          I 106 T 107
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87917  1 -     96226 A--------------------------------
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_8081                                   411  5 +     42994 a------------------------a---ag-a
i Saguinus_bicolor.k141_8081                             I 3 C 0
s Saguinus_imperator.k141_57697                                196  5 +      1030 a------------------------a---ag-a
i Saguinus_imperator.k141_57697                          I 3 I 3
s Saguinus_inustus.k141_699149                               13566  5 +     13640 g------------------------a---ag-g
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               8435  5 +      8564 g------------------------a---ag-g
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469762  5 + 209938924 a------------------------a---ag-a
i Saguinus_midas.LG03                                    I 477 T 477
s Saguinus_mystax.k141_374627                                 8397  5 -      9399 a------------------------a---ag-a
i Saguinus_mystax.k141_374627                            I 406 T 215
s Saimiri_boliviensis.NW_024100920.1                     119951139  5 - 121099817 a------------------------a---ag-a
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23478  5 +     46362 a------------------------a---ag-a
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               23573  5 +     45824 a------------------------a---ag-a
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             40252  5 -     64574 a------------------------a---ag-a
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               3324  5 -     23631 a------------------------a---ag-a
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 23469  5 -     61129 a------------------------a---ag-a
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420671  5 -   5703754 g------------------------a---gg-g
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          56080  5 -     80660 a------------------------a---ag-a
i Sapajus_macrocephalus.k141_351809                      I 368 T 368
s Semnopithecus_entellus.k141_1672505                          153  8 -     12572 A------------------------AAAGAG-A
i Semnopithecus_entellus.k141_1672505                    I 3 I 2
s Semnopithecus_hypoleucos.k141_1615806                      27003  8 +     39453 a------------------------aaagag-a
i Semnopithecus_hypoleucos.k141_1615806                  I 107 T 110
s Semnopithecus_johnii.k141_670120                            7521  8 +     27826 a------------------------aaagag-a
i Semnopithecus_johnii.k141_670120                       I 106 T 109
s Semnopithecus_priam.k141_638794                             7043  8 -     19483 a------------------------aaaGag-a
i Semnopithecus_priam.k141_638794                        I 107 T 110
s Semnopithecus_schistaceus.k141_1572284                       344  8 -     12762 A------------------------AAAGAG-A
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                            205  8 +     13763 A------------------------AAagag-a
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1954037  4 -   3870691 -------------------------g---ag-a
i Spermophilus_dauricus.KZ294078.1                       C 0 I 1
s Suricata_suricatta.SurSur_flattened_line_6629              18436  1 -    196729 A--------------------------------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6810878  1 +  69701581 a--------------------------------
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                10909  1 +     41958 A--------------------------------
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118876  1 -    156842 A--------------------------------
i Tapirus_indicus.TapInd_scaffold_9301                   I 9 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387333  1 +    539355 A--------------------------------
i Tapirus_terrestris.TapTer_scaffold_755                 I 9 C 0
s Tarsius_lariang.k141_2201908                               26444  5 +     70052 a------------------------a---gg-a
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1346  5 -     16117 a------------------------g---ag-a
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428689  8 + 186847797 a------------------------aaagag-a
i Theropithecus_gelada.CM009954.1                        I 96 T 99
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105536  4 +    114563 -------------------------G---GA-G
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 1
s Tonatia_saurophila.TonSau_scaffold_294                     81306  1 +    610378 A--------------------------------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         11094  8 -     20410 a------------------------aaagag-a
i Trachypithecus_auratus.k141_722599                     I 107 T 110
s Trachypithecus_crepusculus.k141_582567                       208  8 -     12674 a------------------------aaagag-a
i Trachypithecus_crepusculus.k141_582567                 I 107 T 110
s Trachypithecus_cristatus.k141_580354                       11195  8 +     19930 a------------------------aaagag-a
i Trachypithecus_cristatus.k141_580354                   I 107 T 110
s Trachypithecus_francoisi.k141_1412647                       7606  8 -     19997 a------------------------aaagag-a
i Trachypithecus_francoisi.k141_1412647                  I 91 T 94
s Trachypithecus_geei.k141_277701                            47745  8 -     60166 a------------------------aaagag-a
i Trachypithecus_geei.k141_277701                        I 106 T 109
s Trachypithecus_germaini.k141_912491                        15217  8 -     27529 a------------------------aaagag-a
i Trachypithecus_germaini.k141_912491                    I 107 T 110
s Trachypithecus_hatinhensis.k141_143409                     15161  8 -     18194 a------------------------aaagag-a
i Trachypithecus_hatinhensis.k141_143409                 I 107 T 110
s Trachypithecus_laotum.k141_907409                           8873  8 -     21137 a------------------------aaagag-a
i Trachypithecus_laotum.k141_907409                      I 91 T 94
s Trachypithecus_leucocephalus.k141_587342                    7576  8 -     10723 a------------------------aaagag-a
i Trachypithecus_leucocephalus.k141_587342               I 91 T 94
s Trachypithecus_melamera.k141_434728                         6748  8 +      9834 a------------------------aaagag-a
i Trachypithecus_melamera.k141_434728                    I 107 T 110
s Trachypithecus_obscurus.k141_190785                        25061  8 +     32220 g------------------------agagag-a
i Trachypithecus_obscurus.k141_190785                    I 107 T 110
s Trachypithecus_phayrei.ctg124                            5939163  8 +   6242583 a------------------------aaagag-a
i Trachypithecus_phayrei.ctg124                          I 107 T 110
s Trachypithecus_pileatus.k141_2007326                        8414  8 +     20839 a------------------------aaagag-a
i Trachypithecus_pileatus.k141_2007326                   I 106 T 109
s Ursus_maritimus.KK499267.1                               4850548  1 -   5085361 a--------------------------------
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  11491  5 +     50397 A------------------------G---AA-A
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11550  5 +     24756 A------------------------G---AA-A
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371994  1 -   5488506 a--------------------------------
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10901  1 -     43706 A--------------------------------
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          5477  1 +     86975 g--------------------------------
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Echinops_telfairi.JH980293.1                            48780689  3 + 111700974 I
e Mus_pahari.LT608297.1                                   31355125 13 -  89631738 T
e Mus_spretus.CM004101.1                                  90752527 13 - 130317789 T
e Mus_musculus.chr8                                       87650466 13 - 129401213 T
e Mus_caroli.LT608237.1                                   84361468 13 - 120012414 T
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      14994  0 +     63895 C
e Xerus_inauris.XerIna_scaffold_2302                          1173  0 +    224448 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   53362 63 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     9343  0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2155690  0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4293354  3 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   6516  8 +      8208 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 72732  9 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             30850  6 +     97271 I
e Sorex_araneus.JH798187.1                                13651056 93 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               3814 63 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11982 13 -     12148 T
e Scalopus_aquaticus.ScaAqu_scaffold_662                    153257 71 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570728 13 +  90668790 T
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Psammomys_obesus.NESX01036370.1                            10498 13 -     21651 T
e Procavia_capensis.ProCapCap_scaffold_85530                 13455  3 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Peromyscus_maniculatus.KI615324.1                       18194880 13 -  18517816 T
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orycteropus_afer.OryAfe_flattened_line_144387               9955  3 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80254 13 +    102263 T
e Ondatra_zibethicus.OndZib_scaffold_46174                   25254 13 +     28053 T
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Nannospalax_galili.KL204047.1                            2034165  0 -   3037898 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189371  9 +    196477 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11260586 13 -  27267610 T
e Microgale_talazaci.MicTal_scaffold_6613                    22438  3 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182348 13 -  29670104 T
e Meriones_unguiculatus.MerUng_scaffold_7390                 32854 13 +    140813 T
e Loxodonta_africana.GL010049.1                            4217433  3 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276898  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                1000  3 +      7595 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Galagoides_demidoff.k141_1711393                            1699  0 +     41679 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3328282 71 -   7059049 I
e Ellobius_talpinus.LOJH01081419.1                             538 13 +      8657 T
e Ellobius_lutescens.LOEQ01008920.1                          20407 13 -    110024 T
e Elephantulus_edwardii.JH947257.1                         1097777  3 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            63648  8 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Crocidura_indochinensis.CroInd_scaffold_37019               3028 88 -     19598 I
e Cricetulus_griseus.LT883664.1                           11667673 13 + 224834208 T
e Cricetomys_gambianus.CriGam_scaffold_18520                 50293  0 +     63868 C
e Condylura_cristata.JH655891.1                           17548142 67 -  53390261 I
e Colobus_guereza.LG01                                   199948999 41 + 200372422 T
e Choloepus_hoffmanni.KN194906.1                            173497  9 +    839153 I
e Choloepus_didactylus.ChoDid_scaffold_45914                 18421  8 +     19366 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870             641  8 -      8501 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e CanFam4.chr16                                           17799210 78 -  60362399 I
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      12706  8 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74597  0 -     89534 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     70906 13 +     87051 T

a score=0.000000
s hg38.chrUn_KI270753v1                                       6901 2 +     62944 a------a
s Allenopithecus_nigroviridis.k141_3361533                   14713 2 -     52922 a------g
i Allenopithecus_nigroviridis.k141_3361533               T 119 C 0
s Allochrocebus_lhoesti.k141_4309873                         14649 2 -     28001 a------g
i Allochrocebus_lhoesti.k141_4309873                     T 99 C 0
s Allochrocebus_preussi.k141_1442296                          5145 2 -     18505 a------g
i Allochrocebus_preussi.k141_1442296                     T 99 C 0
s Allochrocebus_solatus.k141_166128                           5999 2 -     12518 a------g
i Allochrocebus_solatus.k141_166128                      T 99 C 0
s Alouatta_belzebul.k141_3560514                              7477 2 +     51355 a------g
i Alouatta_belzebul.k141_3560514                         T 197 C 0
s Alouatta_caraya.k141_1701091                                 599 2 -     36483 a------a
i Alouatta_caraya.k141_1701091                           T 183 I 184
s Alouatta_discolor.k141_566626                              11234 2 +     28687 g------a
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1509701                                24864 2 +     25266 a------g
i Alouatta_juara.k141_1509701                            T 194 C 0
s Alouatta_macconnelli.k141_918386                             585 2 -      9457 a------g
i Alouatta_macconnelli.k141_918386                       T 194 C 0
s Alouatta_nigerrima.k141_3472759                            18171 2 -     18578 a------g
i Alouatta_nigerrima.k141_3472759                        T 194 C 0
s Alouatta_palliata.k141_2135620                              3558 2 +     47717 a------g
i Alouatta_palliata.k141_2135620                         T 191 C 0
s Alouatta_puruensis.k141_362188                               263 2 +      5663 a------g
i Alouatta_puruensis.k141_362188                         T 198 C 0
s Alouatta_seniculus.k141_117119                             14913 2 +     50774 G------A
i Alouatta_seniculus.k141_117119                         C 0 I 1
s Aotus_azarae.k141_3104676                                  15500 2 -     33861 a------g
i Aotus_azarae.k141_3104676                              T 201 C 0
s Aotus_griseimembra.k141_2240599                            15520 2 -     34016 a------g
i Aotus_griseimembra.k141_2240599                        T 217 C 0
s Aotus_nancymaae.KZ198451.1                               4297917 2 -   5030052 a------g
i Aotus_nancymaae.KZ198451.1                             T 208 C 0
s Aotus_trivirgatus.k141_2152450                             15522 2 -     34685 a------g
i Aotus_trivirgatus.k141_2152450                         T 213 C 0
s Aotus_vociferans.k141_344750                               28646 2 -     47192 a------g
i Aotus_vociferans.k141_344750                           T 213 C 0
s Arctocebus_calabarensis.k141_2318572                       11568 1 +     14667 A-------
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Avahi_laniger.k141_765380                                  53774 2 -     92717 A------A
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54401 2 +     85213 A------A
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             5255 2 -     10423 a------g
i Callibella_humilis.k141_1278103                        T 266 C 0
s Callimico_goeldii.k141_1091182                             24726 2 +     31915 a------g
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            5221 2 +      5267 a------g
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590435 2 - 189096842 a------g
i Callithrix_jacchus.pat_scaffold_3                      T 240 C 0
s Callithrix_kuhlii.k119_1164682                             11966 2 -     12001 A------G
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Carlito_syrichta.NW_007247396.1                           201442 2 +    308752 a------g
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Cebuella_niveiventris.k141_1251222                          9880 2 -     11392 a------g
i Cebuella_niveiventris.k141_1251222                     T 276 C 0
s Cebuella_pygmaea.k141_1309012                               5978 2 -      7577 a------g
i Cebuella_pygmaea.k141_1309012                          T 246 C 0
s Cebus_albifrons.Contig27                                25652438 8 +  26074798 aaggagga
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                 415 2 +     28840 a------a
i Cebus_olivaceus.k141_1764483                           T 416 I 417
s Cebus_unicolor.k141_544048                                 49917 2 -     74725 a------g
i Cebus_unicolor.k141_544048                             I 5 C 0
s Cephalopachus_bancanus.k141_1423433                         5447 2 +     31688 a------g
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4475658 2 +   4669795 a------g
i Cercocebus_atys.KQ010504.1                             T 99 C 0
s Cercocebus_chrysogaster.k141_393940                        14203 2 -     19203 a------g
i Cercocebus_chrysogaster.k141_393940                    I 5 C 0
s Cercocebus_lunulatus.k141_3342297                            819 2 -     14043 a------g
i Cercocebus_lunulatus.k141_3342297                      T 99 C 0
s Cercocebus_torquatus.k141_3057011                           8855 2 +     27781 a------g
i Cercocebus_torquatus.k141_3057011                      T 96 C 0
s Cercopithecus_ascanius.k141_1024104                         9020 2 -     20310 a------g
i Cercopithecus_ascanius.k141_1024104                    T 99 C 0
s Cercopithecus_cephus.k141_1078548                          11999 2 +     29689 a------a
i Cercopithecus_cephus.k141_1078548                      T 100 C 0
s Cercopithecus_diana.k141_1150327                            6753 2 -     20078 a------g
i Cercopithecus_diana.k141_1150327                       T 99 C 0
s Cercopithecus_hamlyni.k141_187466                          14676 2 -     27936 a------g
i Cercopithecus_hamlyni.k141_187466                      T 99 C 0
s Cercopithecus_lowei.k141_1854285                            3540 2 -     17152 a------g
i Cercopithecus_lowei.k141_1854285                       T 99 C 0
s Cercopithecus_albogularis.ctg5                                38817079 2 +  39242232 a------g
i Cercopithecus_albogularis.ctg5                               T 99 C 0
s Cercopithecus_mona.ctg39                                21222771 2 -  21565898 a------g
i Cercopithecus_mona.ctg39                               T 99 C 0
s Cercopithecus_neglectus.k141_2526306                       39889 2 -     53127 a------g
i Cercopithecus_neglectus.k141_2526306                   T 99 C 0
s Cercopithecus_nictitans.k141_1119862                         140 2 +     13442 a------a
i Cercopithecus_nictitans.k141_1119862                   T 99 C 0
s Cercopithecus_petaurista.k141_807961                       14689 2 -     27947 a------a
i Cercopithecus_petaurista.k141_807961                   T 99 C 0
s Cercopithecus_pogonias.k141_822820                         14665 2 +     17596 a------g
i Cercopithecus_pogonias.k141_822820                     T 99 C 0
s Cercopithecus_roloway.k141_2581234                           712 2 +     14005 a------g
i Cercopithecus_roloway.k141_2581234                     T 99 C 0
s Cheirogaleus_major.k141_333249                             21154 2 -     52598 A------A
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16519 2 +     57038 a------a
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2206961                            182 2 -     15524 g------a
i Chiropotes_albinasus.k141_2206961                      T 240 C 0
s Chlorocebus_aethiops.ctg25                              18428649 2 -  18827391 a------g
i Chlorocebus_aethiops.ctg25                             T 99 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15086 2 -     50209 a------g
i Chlorocebus_pygerythrus.k141_1025673                   T 99 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422086 2 + 135778131 a------g
i Chlorocebus_sabaeus.CM001947.1                         T 99 C 0
s Colobus_angolensis.KN981557.1                            1910591 2 +   2368649 a------g
i Colobus_angolensis.KN981557.1                          T 106 I 106
s Colobus_guereza.LG01                                   199948958 2 + 200372422 G------A
i Colobus_guereza.LG01                                   T 41 C 0
s Colobus_polykomos.k141_906115                              37125 2 +     84244 a------g
i Colobus_polykomos.k141_906115                          T 106 I 106
s Daubentonia_madagascariensis.ctg71                      12537370 2 -  12879189 A------A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Erythrocebus_patas.Contig38                             21205256 2 -  21539334 a------g
i Erythrocebus_patas.Contig38                            T 97 C 0
s Eulemur_collaris.k141_377015                                6579 2 -     16928 A------A
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15603 2 -     25546 A------A
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12807 2 +     26330 a------a
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14042 2 +     23973 A------A
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12804 2 +     75513 a------a
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10734 2 +     97555 a------a
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              225 2 +     13026 a------a
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4278 2 -     17153 A------A
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13851 2 +    111500 A------A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Galago_moholi.ctg2040                                     426702 2 -    453645 A------A
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4392 2 +     11339 a------a
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1274 2 -      9135 g------g
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              16156 2 -     32273 a------a
i Gorilla_beringei.k141_3596273                          C 0 T 117
s Gorilla_gorilla.LT578341.1                             186338293 2 + 186649187 a------a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6915 2 -     19426 A------A
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12064 2 -     15286 A------A
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13703 2 +     18253 a------a
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13804 2 -     41752 A------A
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13641 2 -     16460 A------A
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Hoolock_leuconedys.ctg274                                    434961 2 +    630532 a------a
i Hoolock_leuconedys.ctg274                                 C 0 T 110
s Indri_indri.k141_3655594                                   22595 2 +     31101 a------a
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15524156 2 -  30322482 A------A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7517 2 +     64341 a------g
i Leontocebus_fuscicollis.k141_1820339                   T 283 C 0
s Leontocebus_illigeri.k141_3350179                           4840 2 +      4941 a------g
i Leontocebus_illigeri.k141_3350179                      I 5 C 0
s Leontocebus_nigricollis.k141_4610752                        7558 2 +     35603 a------g
i Leontocebus_nigricollis.k141_4610752                   T 270 C 0
s Leontopithecus_chrysomelas.k141_1519602                    29019 2 +     38576 a------g
i Leontopithecus_chrysomelas.k141_1519602                T 225 C 0
s Leontopithecus_rosalia.k141_464620                         25716 2 +     66356 a------g
i Leontopithecus_rosalia.k141_464620                     T 228 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6539 2 -     14121 g------g
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437205 2 +   1826925 a------g
i Lophocebus_aterrimus.ctg367                            T 97 C 0
s Loris_lydekkerianus.k141_2539221                            5951 2 +     11245 A------A
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004771 2 +   6120653 A------A
i Loris_tardigradus.ctg83                                C 0 C 0
s Macaca_arctoides.k141_2326796                               7015 2 +     40492 a------g
i Macaca_arctoides.k141_2326796                          T 103 I 103
s Macaca_assamensis.Contig5                               59676274 2 +  60120075 a------g
i Macaca_assamensis.Contig5                              T 103 I 103
s Macaca_cyclopis.k119_18836                                 12787 2 -     26193 a------g
i Macaca_cyclopis.k119_18836                             T 106 I 106
s Macaca_fascicularis.k141_814140                            80571 2 -    114318 a------g
i Macaca_fascicularis.k141_814140                        T 106 I 106
s Macaca_fuscata.k119_255327                                  6262 2 -     23192 a------g
i Macaca_fuscata.k119_255327                             T 102 I 102
s Macaca_leonina.k141_3550399                                15731 2 -     29190 a------g
i Macaca_leonina.k141_3550399                            T 106 I 106
s Macaca_maura.k141_2733130                                  24296 2 +     37952 a------g
i Macaca_maura.k141_2733130                              T 106 I 106
s Macaca_mulatta.NC_041758.1                             186839385 2 + 187317192 a------g
i Macaca_mulatta.NC_041758.1                             T 106 I 106
s Macaca_nemestrina.KQ007038.1                            25457948 2 -  25927173 a------g
i Macaca_nemestrina.KQ007038.1                           T 106 I 106
s Macaca_nigra.k141_1655396                                  80144 2 +     89720 a------g
i Macaca_nigra.k141_1655396                              T 106 I 106
s Macaca_radiata.k141_3680011                                 7145 2 +     20474 a------g
i Macaca_radiata.k141_3680011                            T 106 I 106
s Macaca_siberu.k141_635500                                   6945 2 -     14993 a------g
i Macaca_siberu.k141_635500                              T 106 I 106
s Macaca_silenus.Contig273                                  329811 2 -    668171 a------g
i Macaca_silenus.Contig273                               T 106 I 106
s Macaca_thibetana.k99_256239                                 5261 2 -     24072 a------g
i Macaca_thibetana.k99_256239                            T 103 I 103
s Macaca_tonkeana.k141_1498238                               25883 2 -     45290 a------G
i Macaca_tonkeana.k141_1498238                           T 106 I 106
s Mandrillus_leucophaeus.scaffold280                      23937478 2 -  24302211 a------g
i Mandrillus_leucophaeus.scaffold280                     T 99 C 0
s Mandrillus_sphinx.Contig270                               351606 2 +    752769 a------g
i Mandrillus_sphinx.Contig270                            T 95 C 0
s Mico_argentatus.k141_1239457                                5795 2 -      7380 a------g
i Mico_argentatus.k141_1239457                           T 240 C 0
s Mico_humeralifer.k141_1976199                               4868 2 +     18990 a------g
i Mico_humeralifer.k141_1976199                          I 5 C 0
s Mico_schneideri.k141_1950671                                      5807 2 -      7356 a------g
i Mico_schneideri.k141_1950671                                 T 240 C 0
s Microcebus_murinus.CM007674.1                           18291577 2 -  93316391 a------a
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9203 2 -     28506 a------g
i Miopithecus_ogouensis.k141_534055                      T 83 C 0
s Mirza_zaza.k141_952172                                      9122 2 -     37649 A------A
i Mirza_zaza.k141_952172                                 C 0 C 0
s Nasalis_larvatus.k141_413338                               15178 2 +     21681 a------g
i Nasalis_larvatus.k141_413338                           T 110 I 110
s Nycticebus_bengalensis.LG01                            102586315 2 - 196305487 A------A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              239 2 +      2075 a------a
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761669 2 + 199412804 A------A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1363615 2 +   3988456 g------g
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147418 2 + 174332312 g------g
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4231 2 +      8798 A------A
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696394 2 -   1103335 a------a
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    44245 2 +     80009 a------a
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189143147 2 + 189151597 a------a
i Pan_troglodytes.CM009242.2                             C 0 I 1
s Papio_anubis.CM001495.2                                183443228 2 + 183742232 a------g
i Papio_anubis.CM001495.2                                T 151 C 0
s Papio_cynocephalus.k141_4307930                             6926 2 +     20448 a------g
i Papio_cynocephalus.k141_4307930                        T 99 C 0
s Papio_hamadryas.Contig39                                20563734 2 +  20919399 a------g
i Papio_hamadryas.Contig39                               T 103 C 0
s Papio_kindae.k141_1936966                                   5670 2 +     41871 a------g
i Papio_kindae.k141_1936966                              T 99 C 0
s Papio_papio.k141_802527                                     8955 2 +     27711 a------g
i Papio_papio.k141_802527                                T 107 C 0
s Papio_ursinus.k141_3428135                                  9036 2 +      9205 a------g
i Papio_ursinus.k141_3428135                             T 95 C 0
s Perodicticus_ibeanus.k141_855320                           10203 2 +     13100 A------C
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8609 2 +     25941 A------C
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Piliocolobus_badius.k141_1234363                           43689 2 +     62158 a------g
i Piliocolobus_badius.k141_1234363                       T 90 I 90
s Piliocolobus_gordonorum.k141_381342                        38420 2 +     89929 a------g
i Piliocolobus_gordonorum.k141_381342                    T 106 I 106
s Piliocolobus_kirkii.k141_448987                            39836 2 +     51399 a------g
i Piliocolobus_kirkii.k141_448987                        T 106 I 106
s Piliocolobus_tephrosceles.PDMG02000141.1                14296074 2 -  14605196 a------g
i Piliocolobus_tephrosceles.PDMG02000141.1               T 106 I 106
s Pongo_abelii.CM009266.2                                189131283 2 + 189387572 a------a
i Pongo_abelii.CM009266.2                                I 109 T 109
s Pongo_pygmaeus.ctg66                                     9570890 2 +   9816681 a------a
i Pongo_pygmaeus.ctg66                                   I 108 T 108
s Presbytis_comata.k141_677006                               73358 2 -     81375 a------g
i Presbytis_comata.k141_677006                           T 106 I 106
s Presbytis_mitrata.k141_1087752                              5178 2 +     19060 a------g
i Presbytis_mitrata.k141_1087752                         T 106 I 106
s Prolemur_simus.MPIZ01000396.1                            2596836 2 -   4620579 a------a
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990818 2 +   2598838 a------a
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29130 2 +     38485 a------a
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1173 2 -     13098 A------A
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26651 2 +     35766 a------a
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4838 2 -     24134 A------A
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28663 2 -     67325 A------A
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4886 2 -      6182 A------A
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15187 2 -     91421 a------g
i Pygathrix_cinerea.k141_1153803                         T 110 I 110
s Pygathrix_nigripes_b.ctg100                                 7609307 2 +   7812017 a------g
i Pygathrix_nigripes_b.ctg100                               T 110 I 110
s Pygathrix_nigripes_a.k141_215492                             15159 2 -     72585 a------g
i Pygathrix_nigripes_a.k141_215492                         T 110 I 110
s Rhinopithecus_bieti.k119_217274                             6873 2 -     11128 a------g
i Rhinopithecus_bieti.k119_217274                        T 107 I 107
s Rhinopithecus_roxellana.NC_044550.1                     91236226 2 - 195417433 a------g
i Rhinopithecus_roxellana.NC_044550.1                    T 103 I 103
s Rhinopithecus_strykeri.ctg102                            7671878 2 +   7961872 a------g
i Rhinopithecus_strykeri.ctg102                          T 107 I 107
s Saguinus_bicolor.k141_8081                                   416 2 +     42994 g------a
i Saguinus_bicolor.k141_8081                             C 0 I 1
s Saguinus_imperator.k141_2524406                             2152 2 +      2197 a------g
i Saguinus_imperator.k141_2524406                        I 5 C 0
s Saguinus_inustus.k141_699149                               13571 2 +     13640 a------g
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               8440 2 +      8564 a------g
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469290 2 + 209938924 a------g
i Saguinus_midas.LG03                                    T 477 C 0
s Saguinus_mystax.k141_374627                                 8187 2 -      9399 a------a
i Saguinus_mystax.k141_374627                            T 215 T 191
s Saimiri_boliviensis.NW_024100920.1                     119951144 2 - 121099817 g------a
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23483 2 +     46362 g------a
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               23578 2 +     45824 g------a
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             40257 2 -     64574 g------a
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               3329 2 -     23631 g------a
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 23474 2 -     61129 g------a
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420676 2 -   5703754 a------g
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          55717 2 -     80660 a------g
i Sapajus_macrocephalus.k141_351809                      T 368 C 0
s Semnopithecus_entellus.k141_11662                          19696 2 -     19888 A------G
i Semnopithecus_entellus.k141_11662                      I 5 I 1
s Semnopithecus_hypoleucos.k141_1615806                      26901 2 +     39453 a------g
i Semnopithecus_hypoleucos.k141_1615806                  T 110 I 110
s Semnopithecus_johnii.k141_670120                            7420 2 +     27826 a------g
i Semnopithecus_johnii.k141_670120                       T 109 I 109
s Semnopithecus_priam.k141_638794                             6941 2 -     19483 a------g
i Semnopithecus_priam.k141_638794                        T 110 I 110
s Semnopithecus_schistaceus.k141_1572284                       352 2 -     12762 G------A
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                            213 2 +     13763 g------a
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Tarsius_lariang.k141_2201908                               26449 2 +     70052 a------g
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1351 2 -     16117 g------a
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428598 2 + 186847797 a------g
i Theropithecus_gelada.CM009954.1                        T 99 C 0
s Trachypithecus_auratus.k141_722599                         10992 2 -     20410 a------a
i Trachypithecus_auratus.k141_722599                     T 110 I 110
s Trachypithecus_crepusculus.k141_582567                       106 2 -     12674 a------g
i Trachypithecus_crepusculus.k141_582567                 T 110 I 110
s Trachypithecus_cristatus.k141_580354                       11093 2 +     19930 a------a
i Trachypithecus_cristatus.k141_580354                   T 110 I 110
s Trachypithecus_francoisi.k141_1412647                       7520 2 -     19997 a------g
i Trachypithecus_francoisi.k141_1412647                  T 94 I 94
s Trachypithecus_geei.k141_277701                            47644 2 -     60166 a------g
i Trachypithecus_geei.k141_277701                        T 109 I 109
s Trachypithecus_germaini.k141_912491                        15115 2 -     27529 a------g
i Trachypithecus_germaini.k141_912491                    T 110 I 110
s Trachypithecus_hatinhensis.k141_143409                     15059 2 -     18194 a------g
i Trachypithecus_hatinhensis.k141_143409                 T 110 I 110
s Trachypithecus_laotum.k141_907409                           8787 2 -     21137 a------g
i Trachypithecus_laotum.k141_907409                      T 94 I 94
s Trachypithecus_leucocephalus.k141_587342                    7490 2 -     10723 a------g
i Trachypithecus_leucocephalus.k141_587342               T 94 I 94
s Trachypithecus_melamera.k141_434728                         6646 2 +      9834 a------g
i Trachypithecus_melamera.k141_434728                    T 110 I 110
s Trachypithecus_obscurus.k141_190785                        24959 2 +     32220 a------g
i Trachypithecus_obscurus.k141_190785                    T 110 I 110
s Trachypithecus_phayrei.ctg124                            5939061 2 +   6242583 a------g
i Trachypithecus_phayrei.ctg124                          T 110 I 110
s Trachypithecus_pileatus.k141_2007326                        8313 2 +     20839 a------g
i Trachypithecus_pileatus.k141_2007326                   T 109 I 109
s Varecia_rubra.k141_590885                                  11496 2 +     50397 A------A
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11555 2 +     24756 A------A
i Varecia_variegata.k141_1128296                         C 0 C 0
e Echinops_telfairi.JH980293.1                            48780689 3 + 111700974 I
e Mus_pahari.LT608297.1                                   31355125 13 -  89631738 T
e Mus_spretus.CM004101.1                                  90752527 13 - 130317789 T
e Mus_musculus.chr8                                       87650466 13 - 129401213 T
e Mus_caroli.LT608237.1                                   84361468 13 - 120012414 T
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      14994 0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5478 0 +     86975 C
e Xerus_inauris.XerIna_scaffold_2302                          1173 0 +    224448 C
e Vulpes_lagopus.VulLag_flattened_line_30954                 10902 0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5371995 0 -   5488506 C
e Ursus_maritimus.KK499267.1                               4850549 0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   53362 63 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     9343 0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2155690 0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4293354 3 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     81307 0 +    610378 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   6516 8 +      8208 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              105540 1 +    114563 I
e Tapirus_terrestris.TapTer_scaffold_755                    387334 0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      118877 0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 72732 9 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                10910 0 +     41958 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6810879 0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629              18437 0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             30850 6 +     97271 I
e Spermophilus_dauricus.KZ294078.1                         1954041 1 -   3870691 I
e Sorex_araneus.JH798187.1                                13651056 93 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               3814 63 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11982 13 -     12148 T
e Scalopus_aquaticus.ScaAqu_scaffold_662                    153257 71 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                87918 0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570728 13 +  90668790 T
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20274421 0 -  38429054 C
e Pteropus_vampyrus.KN534172.1                                6949 0 -      8028 C
e Pteropus_alecto.KB030862.1                              22976896 0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         40349 0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            15188 0 -     21811 C
e Psammomys_obesus.NESX01036370.1                            10498 13 -     21651 T
e Procavia_capensis.ProCapCap_scaffold_85530                 13455 3 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             1869 0 +     22620 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     28220 0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18194880 13 -  18517816 T
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12764 0 -     78924 C
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4721355 0 -   8748460 C
e Panthera_pardus.KV860321.1                                264476 0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  151267 0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       462454 0 -    559221 C
e Orycteropus_afer.OryAfe_flattened_line_144387               9955 3 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80254 13 +    102263 T
e Ondatra_zibethicus.OndZib_scaffold_46174                   25254 13 +     28053 T
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              506765 0 -   2017862 C
e Octodon_degus.JH651603.1                                  746949 1 +  11899542 I
e Nyctereutes_procyonoides.CAJHUB010000658.1               9149506 0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20307615 0 +  31847680 C
e Nannospalax_galili.KL204047.1                            2034165 0 -   3037898 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189371 9 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_281845                          77 0 +      1835 C
e Myotis_lucifugus.GL429869.1                              3903925 0 -   4330536 C
e Myotis_davidii.KB100139.1                                1587833 0 -   6019432 C
e Myotis_brandtii.KE162005.1                                280571 0 -  10118263 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     71339 1 -     80779 I
e Mustela_putorius.JH418006.1                               301572 0 -  14710649 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              5051 1 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           6928 0 +     14753 C
e Mungos_mungo.MunMun_flattened_line_23663                   35534 0 +     37127 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 141733 0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         6029 0 -      8324 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             34405 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1850724 0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11260586 13 -  27267610 T
e Micronycteris_hirsuta.MicHir_scaffold_52381                15766 0 -     19307 C
e Microgale_talazaci.MicTal_scaffold_6613                    22438 3 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182348 13 -  29670104 T
e Meriones_unguiculatus.MerUng_scaffold_7390                 32854 13 +    140813 T
e Mellivora_capensis.MelCap_flattened_line_69365             10159 0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                        10441 0 -    207569 C
e Marmota_marmota.CZRN01000018.1                          33103186 1 -  40650429 I
e Manis_pentadactyla.KN006162.1                              50597 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18608 0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 90730 0 +     94391 C
e Lycaon_pictus.CM007581.1                                17955227 211 -  59628241 I
e Loxodonta_africana.GL010049.1                            4217433 3 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Leptonychotes_weddellii.KB714746.1                       3043161 0 +   3914936 C
e Lepilemur_septentrionalis.k141_185316                      27045 0 +     54090 C
e Lepilemur_ruficaudatus.k141_121139                          1649 0 +     25010 C
e Lepilemur_dorsalis.k141_577674                             29109 0 +     45836 C
e Lepilemur_ankaranensis.k141_596936                         11048 0 -     23766 C
e Lasiurus_borealis.LasBor_scaffold_32767                    16479 0 -     42476 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276898 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Ictidomys_tridecemlineatus.JH393364.1                    7520986 1 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      83207 1 +    135385 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  45128 0 +     55795 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                1000 3 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20662318 1 +  22651954 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               242434 0 +    327341 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32703 1 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31462 1 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Galagoides_demidoff.k141_1711393                            1699 0 +     41679 C
e Fukomys_damarensis.KN121974.1                             850529 1 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  9652 0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20195908 0 + 205367284 C
e Eulemur_albifrons.k141_342033                              13872 0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3328282 71 -   7059049 I
e Equus_przewalskii.KK951119.1                               33512 0 +    498745 C
e Equus_caballus.CM000403.2                               18531483 0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1283663 0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2145831 0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16329422 0 -  41312741 C
e Ellobius_talpinus.LOJH01081419.1                             538 13 +      8657 T
e Ellobius_lutescens.LOEQ01008920.1                          20407 13 -    110024 T
e Elephantulus_edwardii.JH947257.1                         1097777 3 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Eidolon_helvum.KE759718.1                                  10637 0 +     11740 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    36495 1 +     67921 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    6161 0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  673409 0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8630234 0 +  20541912 C
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            63648 8 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35860 1 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    837175 1 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             28601 0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_37019               3028 88 -     19598 I
e Cricetulus_griseus.LT883664.1                           11667673 13 + 224834208 T
e Cricetomys_gambianus.CriGam_scaffold_18520                 50293 0 +     63868 C
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          14520 0 -     20389 C
e Condylura_cristata.JH655891.1                           17548142 67 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            173497 9 +    839153 I
e Choloepus_didactylus.ChoDid_scaffold_45914                 18421 8 +     19366 I
e Chinchilla_lanigera.JH722012.1                           1252901 1 +   2543920 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870             641 8 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2585 0 -     25243 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     93132 0 +    217609 C
e Castor_canadensis.CasCan_scaffold_2074                    137170 1 +    179628 I
e Carollia_perspicillata.CarPer_scaffold_92756                5222 0 -     11696 C
e Capromys_pilorides.CapPil_scaffold_65020                    1153 1 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18500499 0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17958987 0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9034722 0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    185336 0 -    185531 C
e CanFam4.chr16                                           17799210 78 -  60362399 I
e Camelus_ferus.KB017975.1                                  403236 1 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2334953 0 -   7040546 C
e Camelus_bactrianus.KN276810.1                           10002495 0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  4868 0 +     43469 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      12706 8 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      185460 0 +    412891 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74597 0 -     89534 C
e Ailurus_fulgens.LNAC01001112.1                             79464 0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9510688 0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     70906 13 +     87051 T
e Acinonyx_jubatus.LLWD01001279.1                           827414 0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6903 1 +     62944 a
s Allenopithecus_nigroviridis.k141_3361533                   14715 1 -     52922 g
i Allenopithecus_nigroviridis.k141_3361533               C 0 I 119
s Allochrocebus_lhoesti.k141_4309873                         14651 1 -     28001 g
i Allochrocebus_lhoesti.k141_4309873                     C 0 I 99
s Allochrocebus_preussi.k141_1442296                          5147 1 -     18505 g
i Allochrocebus_preussi.k141_1442296                     C 0 I 99
s Allochrocebus_solatus.k141_166128                           6001 1 -     12518 g
i Allochrocebus_solatus.k141_166128                      C 0 I 98
s Alouatta_belzebul.k141_3560514                              7479 1 +     51355 g
i Alouatta_belzebul.k141_3560514                         C 0 I 197
s Alouatta_caraya.k141_1701091                                 785 1 -     36483 a
i Alouatta_caraya.k141_1701091                           I 184 C 0
s Alouatta_discolor.k141_566626                              11236 1 +     28687 a
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1509701                                24866 1 +     25266 g
i Alouatta_juara.k141_1509701                            C 0 I 195
s Alouatta_macconnelli.k141_918386                             587 1 -      9457 g
i Alouatta_macconnelli.k141_918386                       C 0 I 195
s Alouatta_nigerrima.k141_3472759                            18173 1 -     18578 g
i Alouatta_nigerrima.k141_3472759                        C 0 I 195
s Alouatta_palliata.k141_2135620                              3560 1 +     47717 g
i Alouatta_palliata.k141_2135620                         C 0 I 191
s Alouatta_puruensis.k141_362188                               265 1 +      5663 g
i Alouatta_puruensis.k141_362188                         C 0 I 199
s Alouatta_seniculus.k141_117119                             14916 1 +     50774 A
i Alouatta_seniculus.k141_117119                         I 1 C 0
s Aotus_azarae.k141_3104676                                  15502 1 -     33861 g
i Aotus_azarae.k141_3104676                              C 0 I 201
s Aotus_griseimembra.k141_2240599                            15522 1 -     34016 g
i Aotus_griseimembra.k141_2240599                        C 0 I 217
s Aotus_nancymaae.KZ198451.1                               4297919 1 -   5030052 g
i Aotus_nancymaae.KZ198451.1                             C 0 I 208
s Aotus_trivirgatus.k141_2152450                             15524 1 -     34685 g
i Aotus_trivirgatus.k141_2152450                         C 0 I 213
s Aotus_vociferans.k141_344750                               28648 1 -     47192 g
i Aotus_vociferans.k141_344750                           C 0 I 213
s Avahi_laniger.k141_765380                                  53776 1 -     92717 G
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54403 1 +     85213 G
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             5257 1 -     10423 g
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             24728 1 +     31915 g
i Callimico_goeldii.k141_1091182                         C 0 I 264
s Callithrix_geoffroyi.k119_512088                            5223 1 +      5267 g
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590437 1 - 189096842 g
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             11968 1 -     12001 G
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Carlito_syrichta.NW_007247396.1                           201444 1 +    308752 g
i Carlito_syrichta.NW_007247396.1                        C 0 I 3
s Cebuella_niveiventris.k141_1251222                          9882 1 -     11392 g
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               5980 1 -      7577 g
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25652446 1 +  26074798 g
i Cebus_albifrons.Contig27                               C 0 T 440
s Cebus_olivaceus.k141_398305                                 1582 1 +      1777 g
i Cebus_olivaceus.k141_398305                            I 7 I 7
s Cebus_unicolor.k141_544048                                 49919 1 -     74725 g
i Cebus_unicolor.k141_544048                             C 0 I 7
s Cephalopachus_bancanus.k141_1423433                         5449 1 +     31688 g
i Cephalopachus_bancanus.k141_1423433                    C 0 I 114
s Cercocebus_atys.KQ010504.1                               4475660 1 +   4669795 g
i Cercocebus_atys.KQ010504.1                             C 0 I 99
s Cercocebus_chrysogaster.k141_393940                        14205 1 -     19203 g
i Cercocebus_chrysogaster.k141_393940                    C 0 I 2
s Cercocebus_lunulatus.k141_3342297                            821 1 -     14043 g
i Cercocebus_lunulatus.k141_3342297                      C 0 I 99
s Cercocebus_torquatus.k141_3057011                           8857 1 +     27781 g
i Cercocebus_torquatus.k141_3057011                      C 0 I 96
s Cercopithecus_ascanius.k141_1024104                         9022 1 -     20310 g
i Cercopithecus_ascanius.k141_1024104                    C 0 I 99
s Cercopithecus_cephus.k141_1078548                          12001 1 +     29689 g
i Cercopithecus_cephus.k141_1078548                      C 0 I 100
s Cercopithecus_diana.k141_1150327                            6755 1 -     20078 g
i Cercopithecus_diana.k141_1150327                       C 0 I 99
s Cercopithecus_hamlyni.k141_187466                          14678 1 -     27936 g
i Cercopithecus_hamlyni.k141_187466                      C 0 I 99
s Cercopithecus_lowei.k141_1854285                            3542 1 -     17152 g
i Cercopithecus_lowei.k141_1854285                       C 0 I 99
s Cercopithecus_albogularis.ctg5                                38817081 1 +  39242232 g
i Cercopithecus_albogularis.ctg5                               C 0 I 99
s Cercopithecus_mona.ctg39                                21222773 1 -  21565898 g
i Cercopithecus_mona.ctg39                               C 0 I 99
s Cercopithecus_neglectus.k141_2526306                       39891 1 -     53127 g
i Cercopithecus_neglectus.k141_2526306                   C 0 I 99
s Cercopithecus_nictitans.k141_1119862                         142 1 +     13442 g
i Cercopithecus_nictitans.k141_1119862                   C 0 I 99
s Cercopithecus_petaurista.k141_807961                       14691 1 -     27947 g
i Cercopithecus_petaurista.k141_807961                   C 0 I 99
s Cercopithecus_pogonias.k141_822820                         14667 1 +     17596 g
i Cercopithecus_pogonias.k141_822820                     C 0 I 99
s Cercopithecus_roloway.k141_2581234                           714 1 +     14005 g
i Cercopithecus_roloway.k141_2581234                     C 0 I 99
s Cheirogaleus_major.k141_333249                             21156 1 -     52598 G
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16521 1 +     57038 g
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2206961                            184 1 -     15524 g
i Chiropotes_albinasus.k141_2206961                      C 0 I 240
s Chlorocebus_aethiops.ctg25                              18428651 1 -  18827391 g
i Chlorocebus_aethiops.ctg25                             C 0 I 99
s Chlorocebus_pygerythrus.k141_1025673                       15088 1 -     50209 g
i Chlorocebus_pygerythrus.k141_1025673                   C 0 I 99
s Chlorocebus_sabaeus.CM001947.1                         135422088 1 + 135778131 g
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 99
s Colobus_angolensis.KN981557.1                            1910699 1 +   2368649 g
i Colobus_angolensis.KN981557.1                          I 106 T 106
s Colobus_guereza.LG01                                   199948960 1 + 200372422 G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37233 1 +     84244 g
i Colobus_polykomos.k141_906115                          I 106 T 106
s Daubentonia_madagascariensis.ctg71                      12537372 1 -  12879189 G
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Erythrocebus_patas.Contig38                             21205258 1 -  21539334 g
i Erythrocebus_patas.Contig38                            C 0 I 97
s Eulemur_albifrons.k141_342033                              13872 1 -     14127 G
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6581 1 -     16928 G
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15605 1 -     25546 G
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12809 1 +     26330 g
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14044 1 +     23973 G
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12806 1 +     75513 g
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10736 1 +     97555 g
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              227 1 +     13026 g
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4280 1 -     17153 G
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13853 1 +    111500 G
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Galago_moholi.ctg2040                                     426704 1 -    453645 G
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4394 1 +     11339 g
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1276 1 -      9135 g
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              16041 1 -     32273 g
i Gorilla_beringei.k141_3596273                          T 117 I 117
s Gorilla_gorilla.LT578341.1                             186338295 1 + 186649187 a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6917 1 -     19426 G
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12066 1 -     15286 G
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13705 1 +     18253 g
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13806 1 -     41752 G
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13643 1 -     16460 G
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Hoolock_leuconedys.ctg274                                    434853 1 +    630532 g
i Hoolock_leuconedys.ctg274                                 T 110 I 110
s Indri_indri.k141_3655594                                   22597 1 +     31101 g
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15524158 1 -  30322482 G
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7519 1 +     64341 g
i Leontocebus_fuscicollis.k141_1820339                   C 0 I 283
s Leontocebus_illigeri.k141_3350179                           4842 1 +      4941 g
i Leontocebus_illigeri.k141_3350179                      C 0 I 7
s Leontocebus_nigricollis.k141_4610752                        7560 1 +     35603 g
i Leontocebus_nigricollis.k141_4610752                   C 0 I 270
s Leontopithecus_chrysomelas.k141_1519602                    29021 1 +     38576 g
i Leontopithecus_chrysomelas.k141_1519602                C 0 I 225
s Leontopithecus_rosalia.k141_464620                         25718 1 +     66356 g
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         11048 1 -     23766 A
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29109 1 +     45836 A
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1649 1 +     25010 A
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27045 1 +     54090 A
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6541 1 -     14121 g
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437207 1 +   1826925 g
i Lophocebus_aterrimus.ctg367                            C 0 I 97
s Loris_lydekkerianus.k141_2539221                            5953 1 +     11245 G
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004773 1 +   6120653 G
i Loris_tardigradus.ctg83                                C 0 C 0
s Macaca_arctoides.k141_2326796                               7120 1 +     40492 g
i Macaca_arctoides.k141_2326796                          I 103 C 0
s Macaca_assamensis.Contig5                               59676379 1 +  60120075 g
i Macaca_assamensis.Contig5                              I 103 C 0
s Macaca_cyclopis.k119_18836                                 12895 1 -     26193 g
i Macaca_cyclopis.k119_18836                             I 106 C 0
s Macaca_fascicularis.k141_814140                            80679 1 -    114318 g
i Macaca_fascicularis.k141_814140                        I 106 C 0
s Macaca_fuscata.k119_255327                                  6366 1 -     23192 g
i Macaca_fuscata.k119_255327                             I 102 C 0
s Macaca_leonina.k141_3550399                                15839 1 -     29190 g
i Macaca_leonina.k141_3550399                            I 106 C 0
s Macaca_maura.k141_2733130                                  24404 1 +     37952 g
i Macaca_maura.k141_2733130                              I 106 C 0
s Macaca_mulatta.NC_041758.1                             186839493 1 + 187317192 g
i Macaca_mulatta.NC_041758.1                             I 106 C 0
s Macaca_nemestrina.KQ007038.1                            25458056 1 -  25927173 g
i Macaca_nemestrina.KQ007038.1                           I 106 C 0
s Macaca_nigra.k141_1655396                                  80252 1 +     89720 g
i Macaca_nigra.k141_1655396                              I 106 C 0
s Macaca_radiata.k141_3680011                                 7253 1 +     20474 g
i Macaca_radiata.k141_3680011                            I 106 C 0
s Macaca_siberu.k141_635500                                   7053 1 -     14993 g
i Macaca_siberu.k141_635500                              I 106 C 0
s Macaca_silenus.Contig273                                  329919 1 -    668171 g
i Macaca_silenus.Contig273                               I 106 C 0
s Macaca_thibetana.k99_256239                                 5366 1 -     24072 g
i Macaca_thibetana.k99_256239                            I 103 C 0
s Macaca_tonkeana.k141_1498238                               25991 1 -     45290 g
i Macaca_tonkeana.k141_1498238                           I 106 C 0
s Mandrillus_leucophaeus.scaffold280                      23937480 1 -  24302211 g
i Mandrillus_leucophaeus.scaffold280                     C 0 I 99
s Mandrillus_sphinx.Contig270                               351608 1 +    752769 g
i Mandrillus_sphinx.Contig270                            C 0 I 95
s Mico_argentatus.k141_1239457                                5797 1 -      7380 g
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               4870 1 +     18990 g
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      5809 1 -      7356 g
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18291579 1 -  93316391 g
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9205 1 -     28506 g
i Miopithecus_ogouensis.k141_534055                      C 0 I 83
s Mirza_zaza.k141_952172                                      9124 1 -     37649 G
i Mirza_zaza.k141_952172                                 C 0 C 0
s Nasalis_larvatus.k141_413338                               15290 1 +     21681 g
i Nasalis_larvatus.k141_413338                           I 110 T 110
s Nycticebus_bengalensis.LG01                            102586317 1 - 196305487 G
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              241 1 +      2075 g
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761671 1 + 199412804 G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1363617 1 +   3988456 a
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147420 1 + 174332312 g
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Pan_paniscus.KQ411613.1                                    44247 1 +     80009 a
i Pan_paniscus.KQ411613.1                                C 0 T 116
s Pan_troglodytes.KZ622849.1                                 22332 1 +    110857 g
i Pan_troglodytes.KZ622849.1                             T 87 I 6
s Papio_anubis.CM001495.2                                183443230 1 + 183742232 g
i Papio_anubis.CM001495.2                                C 0 I 151
s Papio_cynocephalus.k141_4307930                             6928 1 +     20448 g
i Papio_cynocephalus.k141_4307930                        C 0 I 99
s Papio_hamadryas.Contig39                                20563736 1 +  20919399 g
i Papio_hamadryas.Contig39                               C 0 I 103
s Papio_kindae.k141_1936966                                   5672 1 +     41871 g
i Papio_kindae.k141_1936966                              C 0 I 99
s Papio_papio.k141_802527                                     8957 1 +     27711 g
i Papio_papio.k141_802527                                C 0 I 107
s Papio_ursinus.k141_3428135                                  9038 1 +      9205 g
i Papio_ursinus.k141_3428135                             C 0 I 95
s Perodicticus_ibeanus.k141_855320                           10205 1 +     13100 G
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8611 1 +     25941 G
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Piliocolobus_badius.k141_1234363                           43781 1 +     62158 g
i Piliocolobus_badius.k141_1234363                       I 90 T 90
s Piliocolobus_gordonorum.k141_381342                        38528 1 +     89929 g
i Piliocolobus_gordonorum.k141_381342                    I 106 T 106
s Piliocolobus_kirkii.k141_448987                            39944 1 +     51399 g
i Piliocolobus_kirkii.k141_448987                        I 106 T 106
s Piliocolobus_tephrosceles.PDMG02000141.1                14296182 1 -  14605196 g
i Piliocolobus_tephrosceles.PDMG02000141.1               I 106 T 106
s Pongo_abelii.CM009266.2                                189131176 1 + 189387572 g
i Pongo_abelii.CM009266.2                                T 109 I 109
s Pongo_pygmaeus.ctg66                                     9570784 1 +   9816681 g
i Pongo_pygmaeus.ctg66                                   T 108 I 108
s Presbytis_comata.k141_677006                               73466 1 -     81375 G
i Presbytis_comata.k141_677006                           I 106 T 106
s Presbytis_mitrata.k141_1087752                              5286 1 +     19060 g
i Presbytis_mitrata.k141_1087752                         I 106 T 106
s Prolemur_simus.MPIZ01000396.1                            2596838 1 -   4620579 g
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990820 1 +   2598838 g
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29132 1 +     38485 g
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1175 1 -     13098 G
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26653 1 +     35766 g
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4840 1 -     24134 G
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28665 1 -     67325 G
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4888 1 -      6182 G
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15299 1 -     91421 g
i Pygathrix_cinerea.k141_1153803                         I 110 T 110
s Pygathrix_nigripes_b.ctg100                                 7609419 1 +   7812017 g
i Pygathrix_nigripes_b.ctg100                               I 110 T 110
s Pygathrix_nigripes_a.k141_215492                             15271 1 -     72585 g
i Pygathrix_nigripes_a.k141_215492                         I 110 T 110
s Rhinopithecus_bieti.k119_217274                             6982 1 -     11128 g
i Rhinopithecus_bieti.k119_217274                        I 107 T 107
s Rhinopithecus_roxellana.NC_044550.1                     91236331 1 - 195417433 g
i Rhinopithecus_roxellana.NC_044550.1                    I 103 T 103
s Rhinopithecus_strykeri.ctg102                            7671987 1 +   7961872 g
i Rhinopithecus_strykeri.ctg102                          I 107 T 107
s Saguinus_bicolor.k141_2619299                               8196 1 -      8359 g
i Saguinus_bicolor.k141_2619299                          I 7 I 15
s Saguinus_imperator.k141_2524406                             2154 1 +      2197 g
i Saguinus_imperator.k141_2524406                        C 0 I 7
s Saguinus_inustus.k141_699149                               13573 1 +     13640 g
i Saguinus_inustus.k141_699149                           C 0 I 7
s Saguinus_labiatus.k141_285685                               8442 1 +      8564 g
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469292 1 + 209938924 g
i Saguinus_midas.LG03                                    C 0 I 477
s Saguinus_mystax.k141_374627                                 7998 1 -      9399 g
i Saguinus_mystax.k141_374627                            T 191 I 406
s Saimiri_boliviensis.NW_024100920.1                     119951146 1 - 121099817 a
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23485 1 +     46362 a
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               23580 1 +     45824 a
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             40259 1 -     64574 a
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               3331 1 -     23631 a
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 23476 1 -     61129 a
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420678 1 -   5703754 g
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          55719 1 -     80660 g
i Sapajus_macrocephalus.k141_351809                      C 0 I 368
s Semnopithecus_entellus.k141_1672505                          163 1 -     12572 G
i Semnopithecus_entellus.k141_1672505                    I 2 I 3
s Semnopithecus_hypoleucos.k141_1615806                      27013 1 +     39453 g
i Semnopithecus_hypoleucos.k141_1615806                  I 110 T 110
s Semnopithecus_johnii.k141_670120                            7531 1 +     27826 g
i Semnopithecus_johnii.k141_670120                       I 109 T 109
s Semnopithecus_priam.k141_638794                             7053 1 -     19483 g
i Semnopithecus_priam.k141_638794                        I 110 T 110
s Semnopithecus_schistaceus.k141_1572284                       354 1 -     12762 G
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                            215 1 +     13763 g
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Tarsius_lariang.k141_2201908                               26451 1 +     70052 g
i Tarsius_lariang.k141_2201908                           C 0 I 105
s Tarsius_wallacei.k141_254427                                1353 1 -     16117 g
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428600 1 + 186847797 g
i Theropithecus_gelada.CM009954.1                        C 0 I 99
s Trachypithecus_auratus.k141_722599                         11104 1 -     20410 g
i Trachypithecus_auratus.k141_722599                     I 110 T 110
s Trachypithecus_crepusculus.k141_582567                       218 1 -     12674 g
i Trachypithecus_crepusculus.k141_582567                 I 110 T 110
s Trachypithecus_cristatus.k141_580354                       11205 1 +     19930 g
i Trachypithecus_cristatus.k141_580354                   I 110 T 110
s Trachypithecus_francoisi.k141_1412647                       7616 1 -     19997 g
i Trachypithecus_francoisi.k141_1412647                  I 94 T 94
s Trachypithecus_geei.k141_277701                            47755 1 -     60166 g
i Trachypithecus_geei.k141_277701                        I 109 T 109
s Trachypithecus_germaini.k141_912491                        15227 1 -     27529 g
i Trachypithecus_germaini.k141_912491                    I 110 T 110
s Trachypithecus_hatinhensis.k141_143409                     15171 1 -     18194 g
i Trachypithecus_hatinhensis.k141_143409                 I 110 T 110
s Trachypithecus_laotum.k141_907409                           8883 1 -     21137 g
i Trachypithecus_laotum.k141_907409                      I 94 T 94
s Trachypithecus_leucocephalus.k141_587342                    7586 1 -     10723 g
i Trachypithecus_leucocephalus.k141_587342               I 94 T 94
s Trachypithecus_melamera.k141_434728                         6758 1 +      9834 g
i Trachypithecus_melamera.k141_434728                    I 110 T 110
s Trachypithecus_obscurus.k141_190785                        25071 1 +     32220 g
i Trachypithecus_obscurus.k141_190785                    I 110 T 110
s Trachypithecus_phayrei.ctg124                            5939173 1 +   6242583 g
i Trachypithecus_phayrei.ctg124                          I 110 T 110
s Trachypithecus_pileatus.k141_2007326                        8424 1 +     20839 g
i Trachypithecus_pileatus.k141_2007326                   I 109 T 109
s Varecia_rubra.k141_590885                                  11498 1 +     50397 G
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11557 1 +     24756 G
i Varecia_variegata.k141_1128296                         C 0 C 0
e Echinops_telfairi.JH980293.1                            48780689 3 + 111700974 I
e Otolemur_garnettii.GL873799.1                             696396 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         4233 0 +      8798 C
e Mus_pahari.LT608297.1                                   31355125 13 -  89631738 T
e Mus_spretus.CM004101.1                                  90752527 13 - 130317789 T
e Mus_musculus.chr8                                       87650466 13 - 129401213 T
e Mus_caroli.LT608237.1                                   84361468 13 - 120012414 T
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      14994 0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5478 0 +     86975 C
e Xerus_inauris.XerIna_scaffold_2302                          1173 0 +    224448 C
e Vulpes_lagopus.VulLag_flattened_line_30954                 10902 0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5371995 0 -   5488506 C
e Ursus_maritimus.KK499267.1                               4850549 0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   53362 63 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     9343 0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2155690 0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4293354 3 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     81307 0 +    610378 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   6516 8 +      8208 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              105540 1 +    114563 I
e Tapirus_terrestris.TapTer_scaffold_755                    387334 0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      118877 0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 72732 9 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                10910 0 +     41958 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6810879 0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629              18437 0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             30850 6 +     97271 I
e Spermophilus_dauricus.KZ294078.1                         1954041 1 -   3870691 I
e Sorex_araneus.JH798187.1                                13651056 93 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               3814 63 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11982 13 -     12148 T
e Scalopus_aquaticus.ScaAqu_scaffold_662                    153257 71 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                87918 0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570728 13 +  90668790 T
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20274421 0 -  38429054 C
e Pteropus_vampyrus.KN534172.1                                6949 0 -      8028 C
e Pteropus_alecto.KB030862.1                              22976896 0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         40349 0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            15188 0 -     21811 C
e Psammomys_obesus.NESX01036370.1                            10498 13 -     21651 T
e Procavia_capensis.ProCapCap_scaffold_85530                 13455 3 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             1869 0 +     22620 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     28220 0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18194880 13 -  18517816 T
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12764 0 -     78924 C
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4721355 0 -   8748460 C
e Panthera_pardus.KV860321.1                                264476 0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  151267 0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       462454 0 -    559221 C
e Orycteropus_afer.OryAfe_flattened_line_144387               9955 3 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80254 13 +    102263 T
e Ondatra_zibethicus.OndZib_scaffold_46174                   25254 13 +     28053 T
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              506765 0 -   2017862 C
e Octodon_degus.JH651603.1                                  746949 1 +  11899542 I
e Nyctereutes_procyonoides.CAJHUB010000658.1               9149506 0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20307615 0 +  31847680 C
e Nannospalax_galili.KL204047.1                            2034165 0 -   3037898 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189371 9 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_281845                          77 0 +      1835 C
e Myotis_lucifugus.GL429869.1                              3903925 0 -   4330536 C
e Myotis_davidii.KB100139.1                                1587833 0 -   6019432 C
e Myotis_brandtii.KE162005.1                                280571 0 -  10118263 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     71339 1 -     80779 I
e Mustela_putorius.JH418006.1                               301572 0 -  14710649 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              5051 1 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           6928 0 +     14753 C
e Mungos_mungo.MunMun_flattened_line_23663                   35534 0 +     37127 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 141733 0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         6029 0 -      8324 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             34405 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1850724 0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11260586 13 -  27267610 T
e Micronycteris_hirsuta.MicHir_scaffold_52381                15766 0 -     19307 C
e Microgale_talazaci.MicTal_scaffold_6613                    22438 3 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182348 13 -  29670104 T
e Meriones_unguiculatus.MerUng_scaffold_7390                 32854 13 +    140813 T
e Mellivora_capensis.MelCap_flattened_line_69365             10159 0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                        10441 0 -    207569 C
e Marmota_marmota.CZRN01000018.1                          33103186 1 -  40650429 I
e Manis_pentadactyla.KN006162.1                              50597 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18608 0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 90730 0 +     94391 C
e Lycaon_pictus.CM007581.1                                17955227 211 -  59628241 I
e Loxodonta_africana.GL010049.1                            4217433 3 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Leptonychotes_weddellii.KB714746.1                       3043161 0 +   3914936 C
e Lasiurus_borealis.LasBor_scaffold_32767                    16479 0 -     42476 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276898 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Ictidomys_tridecemlineatus.JH393364.1                    7520986 1 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      83207 1 +    135385 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  45128 0 +     55795 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                1000 3 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20662318 1 +  22651954 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               242434 0 +    327341 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32703 1 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31462 1 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Galagoides_demidoff.k141_1711393                            1699 0 +     41679 C
e Fukomys_damarensis.KN121974.1                             850529 1 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                  9652 0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20195908 0 + 205367284 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3328282 71 -   7059049 I
e Equus_przewalskii.KK951119.1                               33512 0 +    498745 C
e Equus_caballus.CM000403.2                               18531483 0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1283663 0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2145831 0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16329422 0 -  41312741 C
e Ellobius_talpinus.LOJH01081419.1                             538 13 +      8657 T
e Ellobius_lutescens.LOEQ01008920.1                          20407 13 -    110024 T
e Elephantulus_edwardii.JH947257.1                         1097777 3 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Eidolon_helvum.KE759718.1                                  10637 0 +     11740 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    36495 1 +     67921 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    6161 0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  673409 0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8630234 0 +  20541912 C
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            63648 8 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35860 1 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    837175 1 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             28601 0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_37019               3028 88 -     19598 I
e Cricetulus_griseus.LT883664.1                           11667673 13 + 224834208 T
e Cricetomys_gambianus.CriGam_scaffold_18520                 50293 0 +     63868 C
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          14520 0 -     20389 C
e Condylura_cristata.JH655891.1                           17548142 67 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            173497 9 +    839153 I
e Choloepus_didactylus.ChoDid_scaffold_45914                 18421 8 +     19366 I
e Chinchilla_lanigera.JH722012.1                           1252901 1 +   2543920 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870             641 8 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2585 0 -     25243 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     93132 0 +    217609 C
e Castor_canadensis.CasCan_scaffold_2074                    137170 1 +    179628 I
e Carollia_perspicillata.CarPer_scaffold_92756                5222 0 -     11696 C
e Capromys_pilorides.CapPil_scaffold_65020                    1153 1 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18500499 0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17958987 0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9034722 0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    185336 0 -    185531 C
e CanFam4.chr16                                           17799210 78 -  60362399 I
e Camelus_ferus.KB017975.1                                  403236 1 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2334953 0 -   7040546 C
e Camelus_bactrianus.KN276810.1                           10002495 0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  4868 0 +     43469 C
e Arctocebus_calabarensis.k141_2318572                       11569 0 +     14667 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      12706 8 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      185460 0 +    412891 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74597 0 -     89534 C
e Ailurus_fulgens.LNAC01001112.1                             79464 0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9510688 0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     70906 13 +     87051 T
e Acinonyx_jubatus.LLWD01001279.1                           827414 0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6904 3 +     62944 aa-a
s Allenopithecus_nigroviridis.k141_3361533                   14835 3 -     52922 aa-a
i Allenopithecus_nigroviridis.k141_3361533               I 119 C 0
s Allochrocebus_lhoesti.k141_4309873                         14751 1 -     28001 ---a
i Allochrocebus_lhoesti.k141_4309873                     I 99 C 0
s Allochrocebus_preussi.k141_1442296                          5247 3 -     18505 aa-a
i Allochrocebus_preussi.k141_1442296                     I 99 C 0
s Allochrocebus_solatus.k141_166128                           6100 2 -     12518 -g-a
i Allochrocebus_solatus.k141_166128                      I 98 C 0
s Alouatta_belzebul.k141_3560514                              7677 3 +     51355 aa-a
i Alouatta_belzebul.k141_3560514                         I 197 C 0
s Alouatta_caraya.k141_1701091                                 786 3 -     36483 aa-a
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              11237 2 +     28687 aa--
i Alouatta_discolor.k141_566626                          C 0 I 3
s Alouatta_juara.k141_1509701                                25062 3 +     25266 aa-a
i Alouatta_juara.k141_1509701                            I 195 C 0
s Alouatta_macconnelli.k141_918386                             783 3 -      9457 aa-a
i Alouatta_macconnelli.k141_918386                       I 195 C 0
s Alouatta_nigerrima.k141_3472759                            18369 3 -     18578 aa-a
i Alouatta_nigerrima.k141_3472759                        I 195 C 0
s Alouatta_palliata.k141_2135620                              3752 3 +     47717 aa-a
i Alouatta_palliata.k141_2135620                         I 191 C 0
s Alouatta_puruensis.k141_362188                               465 3 +      5663 aa-a
i Alouatta_puruensis.k141_362188                         I 199 C 0
s Alouatta_seniculus.k141_117119                             14917 3 +     50774 AA-A
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  15704 3 -     33861 aa-a
i Aotus_azarae.k141_3104676                              I 201 C 0
s Aotus_griseimembra.k141_2240599                            15740 3 -     34016 aa-a
i Aotus_griseimembra.k141_2240599                        I 217 C 0
s Aotus_nancymaae.KZ198451.1                               4298128 3 -   5030052 aa-a
i Aotus_nancymaae.KZ198451.1                             I 208 C 0
s Aotus_trivirgatus.k141_2152450                             15738 3 -     34685 aa-a
i Aotus_trivirgatus.k141_2152450                         I 213 C 0
s Aotus_vociferans.k141_344750                               28862 3 -     47192 aa-a
i Aotus_vociferans.k141_344750                           I 213 C 0
s Avahi_laniger.k141_765380                                  53777 3 -     92717 AA-A
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54404 3 +     85213 AA-A
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             5258 4 -     10423 gatg
i Callibella_humilis.k141_1278103                        C 0 I 265
s Callimico_goeldii.k141_1091182                             24993 3 +     31915 aa-a
i Callimico_goeldii.k141_1091182                         I 264 C 0
s Callithrix_geoffroyi.k119_512088                            5224 4 +      5267 gatg
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590438 4 - 189096842 gatg
i Callithrix_jacchus.pat_scaffold_3                      C 0 I 239
s Callithrix_kuhlii.k119_1164682                             11969 4 -     12001 GATG
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1154 3 -     12242 GA-A
i Capromys_pilorides.CapPil_scaffold_65020               I 1 C 0
s Carlito_syrichta.NW_007259797.1                           156066 3 -    496798 aa-a
i Carlito_syrichta.NW_007259797.1                        I 24 I 3
s Castor_canadensis.CasCan_scaffold_2074                    137171 3 +    179628 GA-A
i Castor_canadensis.CasCan_scaffold_2074                 I 1 C 0
s Cebuella_niveiventris.k141_1251222                          9883 4 -     11392 gatg
i Cebuella_niveiventris.k141_1251222                     C 0 I 275
s Cebuella_pygmaea.k141_1309012                               5981 4 -      7577 gatg
i Cebuella_pygmaea.k141_1309012                          C 0 I 245
s Cebus_albifrons.Contig27                                25652007 4 +  26074798 gatg
i Cebus_albifrons.Contig27                               T 440 I 440
s Cebus_olivaceus.k141_1764483                                 834 3 +     28840 aa-a
i Cebus_olivaceus.k141_1764483                           I 417 C 0
s Cebus_unicolor.k141_1837183                                  559 3 +     14051 aa-a
i Cebus_unicolor.k141_1837183                            I 3 C 0
s Cephalopachus_bancanus.k141_1423433                         5564 3 +     31688 aa-a
i Cephalopachus_bancanus.k141_1423433                    I 114 T 114
s Cercocebus_atys.KQ010504.1                               4475760 3 +   4669795 aa-a
i Cercocebus_atys.KQ010504.1                             I 99 C 0
s Cercocebus_chrysogaster.k141_1540778                         264 3 +     17872 aa-a
i Cercocebus_chrysogaster.k141_1540778                   I 3 C 0
s Cercocebus_lunulatus.k141_3342297                            921 3 -     14043 aa-a
i Cercocebus_lunulatus.k141_3342297                      I 99 C 0
s Cercocebus_torquatus.k141_3057011                           8954 3 +     27781 aa-a
i Cercocebus_torquatus.k141_3057011                      I 96 C 0
s Cercopithecus_ascanius.k141_1024104                         9122 3 -     20310 aa-a
i Cercopithecus_ascanius.k141_1024104                    I 99 C 0
s Cercopithecus_cephus.k141_1078548                          12102 3 +     29689 aa-a
i Cercopithecus_cephus.k141_1078548                      I 100 C 0
s Cercopithecus_diana.k141_1150327                            6855 3 -     20078 aa-a
i Cercopithecus_diana.k141_1150327                       I 99 C 0
s Cercopithecus_hamlyni.k141_187466                          14778 3 -     27936 aa-a
i Cercopithecus_hamlyni.k141_187466                      I 99 C 0
s Cercopithecus_lowei.k141_1854285                            3642 3 -     17152 aa-a
i Cercopithecus_lowei.k141_1854285                       I 99 C 0
s Cercopithecus_albogularis.ctg5                                38817181 3 +  39242232 aa-a
i Cercopithecus_albogularis.ctg5                               I 99 C 0
s Cercopithecus_mona.ctg39                                21222873 3 -  21565898 aa-a
i Cercopithecus_mona.ctg39                               I 99 C 0
s Cercopithecus_neglectus.k141_2526306                       39991 3 -     53127 aa-a
i Cercopithecus_neglectus.k141_2526306                   I 99 C 0
s Cercopithecus_nictitans.k141_1119862                         242 3 +     13442 aa-a
i Cercopithecus_nictitans.k141_1119862                   I 99 C 0
s Cercopithecus_petaurista.k141_807961                       14791 3 -     27947 aa-a
i Cercopithecus_petaurista.k141_807961                   I 99 C 0
s Cercopithecus_pogonias.k141_822820                         14767 3 +     17596 aa-a
i Cercopithecus_pogonias.k141_822820                     I 99 C 0
s Cercopithecus_roloway.k141_2581234                           814 3 +     14005 aa-a
i Cercopithecus_roloway.k141_2581234                     I 99 C 0
s Cheirogaleus_major.k141_333249                             21157 3 -     52598 AA-A
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16522 3 +     57038 aa-a
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1252902 3 +   2543920 ga-a
i Chinchilla_lanigera.JH722012.1                         I 1 C 0
s Chiropotes_albinasus.k141_2206961                            425 3 -     15524 aa-a
i Chiropotes_albinasus.k141_2206961                      I 240 C 0
s Chlorocebus_aethiops.ctg25                              18428751 3 -  18827391 ag-a
i Chlorocebus_aethiops.ctg25                             I 99 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15188 3 -     50209 ag-a
i Chlorocebus_pygerythrus.k141_1025673                   I 99 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422188 3 + 135778131 ag-a
i Chlorocebus_sabaeus.CM001947.1                         I 99 C 0
s Colobus_angolensis.KN981557.1                            1910594 3 +   2368649 aa-g
i Colobus_angolensis.KN981557.1                          T 106 I 106
s Colobus_guereza.LG01                                   199948961 3 + 200372422 TT-A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37128 3 +     84244 aa-g
i Colobus_polykomos.k141_906115                          T 106 I 106
s Ctenodactylus_gundi.CteGun_scaffold_65                    837176 3 +   1526836 GA-G
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 1 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35861 3 +     51376 GA-A
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 1 C 0
s Daubentonia_madagascariensis.ctg71                      12537373 3 -  12879189 AA-A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36496 3 +     67921 GA-A
i Dinomys_branickii.DinBra_scaffold_21862                I 1 C 0
s Erythrocebus_patas.Contig38                             21205356 3 -  21539334 ag-a
i Erythrocebus_patas.Contig38                            I 97 C 0
s Fukomys_damarensis.KN121974.1                             850530 3 +   3816255 ga-g
i Fukomys_damarensis.KN121974.1                          I 1 C 0
s Galago_moholi.ctg2040                                     426705 3 -    453645 AA-A
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4395 3 +     11339 aa-a
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1277 3 -      9135 ag-g
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            31463 3 +     49224 GA-G
i Glis_glis.GliGli_scaffold_19807                        I 1 C 0
s Gorilla_beringei.k141_3596273                              16159 3 -     32273 aa-a
i Gorilla_beringei.k141_3596273                          I 117 C 0
s Gorilla_gorilla.LT578341.1                             186338296 3 + 186649187 aa-a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   32704 3 +     78134 CA-G
i Graphiurus_murinus.GraMur_scaffold_10447               I 1 I 1
s Heterocephalus_glaber.JH602082.1                        20662319 3 +  22651954 ga-g
i Heterocephalus_glaber.JH602082.1                       I 1 C 0
s Hoolock_leuconedys.ctg274                                    434964 3 +    630532 aa-a
i Hoolock_leuconedys.ctg274                                 I 110 T 110
s Hystrix_cristata.HysCri_scaffold_5660                      83208 3 +    135385 GA-G
i Hystrix_cristata.HysCri_scaffold_5660                  I 1 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7520987 3 -   7955117 aa-a
i Ictidomys_tridecemlineatus.JH393364.1                  I 1 C 0
s Indri_indri.k141_3655594                                   22598 3 +     31101 aa-a
i Indri_indri.k141_3655594                               C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7803 3 +     64341 aa-a
i Leontocebus_fuscicollis.k141_1820339                   I 283 C 0
s Leontocebus_illigeri.k141_1304848                            143 3 -     35062 aa-a
i Leontocebus_illigeri.k141_1304848                      I 3 C 0
s Leontocebus_nigricollis.k141_4610752                        7831 3 +     35603 aa-a
i Leontocebus_nigricollis.k141_4610752                   I 270 C 0
s Leontopithecus_chrysomelas.k141_1519602                    29247 3 +     38576 aa-a
i Leontopithecus_chrysomelas.k141_1519602                I 225 C 0
s Leontopithecus_rosalia.k141_464620                         25719 4 +     66356 gatg
i Leontopithecus_rosalia.k141_464620                     C 0 I 227
s Lepilemur_ankaranensis.k141_596936                         11049 3 -     23766 AA-A
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29110 3 +     45836 AA-A
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1650 1 +     25010 ---A
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27046 3 +     54090 AA-A
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6542 3 -     14121 ag-g
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 16
s Lophocebus_aterrimus.ctg367                              1437305 3 +   1826925 aa-a
i Lophocebus_aterrimus.ctg367                            I 97 C 0
s Loris_lydekkerianus.k141_2539221                            5954 3 +     11245 AA-A
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004774 3 +   6120653 AA-A
i Loris_tardigradus.ctg83                                C 0 C 0
s Macaca_arctoides.k141_2326796                               7121 3 +     40492 aa-a
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59676380 3 +  60120075 aa-a
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 12896 3 -     26193 aa-a
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            80680 3 -    114318 aa-a
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  6367 3 -     23192 aa-a
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                15840 3 -     29190 aa-a
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  24405 3 +     37952 aa-a
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186839494 3 + 187317192 aa-a
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458057 3 -  25927173 aa-a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  80253 3 +     89720 aa-a
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 7254 3 +     20474 aa-a
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   7054 3 -     14993 aa-a
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  329920 3 -    668171 aa-a
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 5367 3 -     24072 aa-a
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               25992 3 -     45290 aa-a
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23937580 3 -  24302211 aa-a
i Mandrillus_leucophaeus.scaffold280                     I 99 C 0
s Mandrillus_sphinx.Contig270                               351704 3 +    752769 aa-a
i Mandrillus_sphinx.Contig270                            I 95 C 0
s Marmota_marmota.CZRN01000018.1                          33103187 3 -  40650429 aa-a
i Marmota_marmota.CZRN01000018.1                         I 1 C 0
s Mico_argentatus.k141_1239457                                5798 4 -      7380 gatg
i Mico_argentatus.k141_1239457                           C 0 I 239
s Mico_humeralifer.k141_1976199                               4871 4 +     18990 aatg
i Mico_humeralifer.k141_1976199                          C 0 I 3
s Mico_schneideri.k141_1950671                                      5810 4 -      7356 gatg
i Mico_schneideri.k141_1950671                                 C 0 I 239
s Microcebus_murinus.CM007674.1                           18291580 3 -  93316391 aa-a
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9289 3 -     28506 aa-a
i Miopithecus_ogouensis.k141_534055                      I 83 C 0
s Mirza_zaza.k141_952172                                      9125 3 -     37649 AT-A
i Mirza_zaza.k141_952172                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              5052 3 +     14296 GA-G
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 1 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71340 3 -     80779 GA-A
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 1 C 0
s Nasalis_larvatus.k141_413338                               15181 3 +     21681 aa-g
i Nasalis_larvatus.k141_413338                           T 110 I 110
s Nycticebus_bengalensis.LG01                            102586318 3 - 196305487 GA-A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              242 3 +      2075 ga-a
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761672 3 + 199412804 GA-A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1363618 3 +   3988456 aa-a
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  746950 3 +  11899542 ga-a
i Octodon_degus.JH651603.1                               I 1 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147421 3 + 174332312 ag-g
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Pan_paniscus.KQ411613.1                                    44132 2 +     80009 -a-g
i Pan_paniscus.KQ411613.1                                T 116 I 116
s Pan_troglodytes.CM009242.2                             189143150 3 + 189151597 aa-a
i Pan_troglodytes.CM009242.2                             I 1 C 0
s Papio_anubis.CM001495.2                                183443382 3 + 183742232 aa-a
i Papio_anubis.CM001495.2                                I 151 C 0
s Papio_cynocephalus.k141_4307930                             7028 3 +     20448 aa-a
i Papio_cynocephalus.k141_4307930                        I 99 C 0
s Papio_hamadryas.Contig39                                20563840 3 +  20919399 aa-a
i Papio_hamadryas.Contig39                               I 103 C 0
s Papio_kindae.k141_1936966                                   5772 3 +     41871 aa-a
i Papio_kindae.k141_1936966                              I 99 C 0
s Papio_papio.k141_802527                                     9065 3 +     27711 aa-a
i Papio_papio.k141_802527                                I 107 C 0
s Papio_ursinus.k141_3428135                                  9134 3 +      9205 aa-a
i Papio_ursinus.k141_3428135                             I 95 C 0
s Perodicticus_ibeanus.k141_855320                           10206 3 +     13100 AA-A
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8612 3 +     25941 AA-A
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28220 3 -     29689 GA-G
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Piliocolobus_badius.k141_1234363                           43692 3 +     62158 aa-g
i Piliocolobus_badius.k141_1234363                       T 90 I 90
s Piliocolobus_gordonorum.k141_381342                        38423 3 +     89929 aa-g
i Piliocolobus_gordonorum.k141_381342                    T 106 I 106
s Piliocolobus_kirkii.k141_448987                            39839 3 +     51399 aa-g
i Piliocolobus_kirkii.k141_448987                        T 106 I 106
s Piliocolobus_tephrosceles.PDMG02000141.1                14296077 3 -  14605196 aa-g
i Piliocolobus_tephrosceles.PDMG02000141.1               T 106 I 106
s Pongo_abelii.CM009266.2                                189131286 3 + 189387572 aa-a
i Pongo_abelii.CM009266.2                                I 109 C 0
s Pongo_pygmaeus.ctg66                                     9570893 3 +   9816681 aa-a
i Pongo_pygmaeus.ctg66                                   I 108 C 0
s Presbytis_comata.k141_677006                               73361 3 -     81375 aa-g
i Presbytis_comata.k141_677006                           T 106 I 106
s Presbytis_mitrata.k141_1087752                              5181 3 +     19060 aa-g
i Presbytis_mitrata.k141_1087752                         T 106 I 106
s Propithecus_coquerelli.NW_012148875.1                     990821 3 +   2598838 aa-a
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29133 3 +     38485 aa-a
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1176 3 -     13098 AA-A
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26654 3 +     35766 aa-a
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4841 3 -     24134 AA-A
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28666 3 -     67325 AA-A
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4889 3 -      6182 AA-A
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15190 3 -     91421 aa-g
i Pygathrix_cinerea.k141_1153803                         T 110 I 110
s Pygathrix_nigripes_b.ctg100                                 7609310 3 +   7812017 aa-g
i Pygathrix_nigripes_b.ctg100                               T 110 I 110
s Pygathrix_nigripes_a.k141_215492                             15162 3 -     72585 aa-g
i Pygathrix_nigripes_a.k141_215492                         T 110 I 110
s Rhinopithecus_bieti.k119_217274                             6876 3 -     11128 aa-g
i Rhinopithecus_bieti.k119_217274                        T 107 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236229 3 - 195417433 aa-g
i Rhinopithecus_roxellana.NC_044550.1                    T 103 C 0
s Rhinopithecus_strykeri.ctg102                            7671881 3 +   7961872 aa-g
i Rhinopithecus_strykeri.ctg102                          T 107 C 0
s Saguinus_bicolor.k141_8081                                   419 3 +     42994 aa-a
i Saguinus_bicolor.k141_8081                             I 1 C 0
s Saguinus_imperator.k141_57697                                204 3 +      1030 aa-a
i Saguinus_imperator.k141_57697                          I 3 C 0
s Saguinus_inustus.k141_3945547                                279 3 -      8737 aa-a
i Saguinus_inustus.k141_3945547                          I 2 C 0
s Saguinus_labiatus.k141_285685                               8443 4 +      8564 gatg
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469770 3 + 209938924 aa-a
i Saguinus_midas.LG03                                    I 477 C 0
s Saguinus_mystax.k141_374627                                 8405 3 -      9399 aa-a
i Saguinus_mystax.k141_374627                            I 406 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951147 3 - 121099817 aa-a
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23486 3 +     46362 aa-a
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               23581 3 +     45824 aa-a
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             40260 3 -     64574 aa-a
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               3332 3 -     23631 aa-a
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 23477 3 -     61129 aa-a
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420679 4 -   5703754 gatg
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          56088 3 -     80660 aa-a
i Sapajus_macrocephalus.k141_351809                      I 368 C 0
s Semnopithecus_entellus.k141_11662                          19699 3 -     19888 AA-G
i Semnopithecus_entellus.k141_11662                      I 1 I 3
s Semnopithecus_hypoleucos.k141_1615806                      26904 3 +     39453 aa-g
i Semnopithecus_hypoleucos.k141_1615806                  T 110 I 110
s Semnopithecus_johnii.k141_670120                            7423 3 +     27826 aa-g
i Semnopithecus_johnii.k141_670120                       T 109 I 109
s Semnopithecus_priam.k141_638794                             6944 3 -     19483 aa-g
i Semnopithecus_priam.k141_638794                        T 110 I 110
s Semnopithecus_schistaceus.k141_1572284                       355 3 -     12762 AG-A
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                            216 3 +     13763 ag-a
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1954042 3 -   3870691 aa-a
i Spermophilus_dauricus.KZ294078.1                       I 1 C 0
s Tarsius_lariang.k141_2201908                               26557 3 +     70052 aa-a
i Tarsius_lariang.k141_2201908                           I 105 T 105
s Tarsius_wallacei.k141_254427                                1354 3 -     16117 aa-a
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428700 3 + 186847797 aa-a
i Theropithecus_gelada.CM009954.1                        I 99 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105541 3 +    114563 GA-G
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 1 C 0
s Trachypithecus_auratus.k141_722599                         10995 3 -     20410 aa-g
i Trachypithecus_auratus.k141_722599                     T 110 I 110
s Trachypithecus_crepusculus.k141_582567                       109 3 -     12674 aa-g
i Trachypithecus_crepusculus.k141_582567                 T 110 I 110
s Trachypithecus_cristatus.k141_580354                       11096 3 +     19930 aa-g
i Trachypithecus_cristatus.k141_580354                   T 110 I 110
s Trachypithecus_francoisi.k141_1412647                       7523 3 -     19997 aa-g
i Trachypithecus_francoisi.k141_1412647                  T 94 I 94
s Trachypithecus_geei.k141_277701                            47647 3 -     60166 aa-g
i Trachypithecus_geei.k141_277701                        T 109 I 109
s Trachypithecus_germaini.k141_912491                        15118 3 -     27529 aa-g
i Trachypithecus_germaini.k141_912491                    T 110 I 110
s Trachypithecus_hatinhensis.k141_143409                     15062 3 -     18194 aa-g
i Trachypithecus_hatinhensis.k141_143409                 T 110 I 110
s Trachypithecus_laotum.k141_907409                           8790 3 -     21137 aa-g
i Trachypithecus_laotum.k141_907409                      T 94 I 94
s Trachypithecus_leucocephalus.k141_587342                    7493 3 -     10723 aa-g
i Trachypithecus_leucocephalus.k141_587342               T 94 I 94
s Trachypithecus_melamera.k141_434728                         6649 3 +      9834 aa-g
i Trachypithecus_melamera.k141_434728                    T 110 I 110
s Trachypithecus_obscurus.k141_190785                        24962 3 +     32220 aa-g
i Trachypithecus_obscurus.k141_190785                    T 110 I 110
s Trachypithecus_phayrei.ctg124                            5939064 3 +   6242583 aa-g
i Trachypithecus_phayrei.ctg124                          T 110 I 110
s Trachypithecus_pileatus.k141_2007326                        8316 3 +     20839 aa-g
i Trachypithecus_pileatus.k141_2007326                   T 109 I 109
s Varecia_rubra.k141_590885                                  11499 3 +     50397 AA-A
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11558 3 +     24756 AA-A
i Varecia_variegata.k141_1128296                         C 0 C 0
e Echinops_telfairi.JH980293.1                            48780689 3 + 111700974 I
e Otolemur_garnettii.GL873799.1                             696396 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         4233 0 +      8798 C
e Mus_pahari.LT608297.1                                   31355125 13 -  89631738 T
e Mus_spretus.CM004101.1                                  90752527 13 - 130317789 T
e Mus_musculus.chr8                                       87650466 13 - 129401213 T
e Mus_caroli.LT608237.1                                   84361468 13 - 120012414 T
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      14994 0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5478 0 +     86975 C
e Xerus_inauris.XerIna_scaffold_2302                          1173 0 +    224448 C
e Vulpes_lagopus.VulLag_flattened_line_30954                 10902 0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5371995 0 -   5488506 C
e Ursus_maritimus.KK499267.1                               4850549 0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   53362 63 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     9343 0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2155690 0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4293354 3 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     81307 0 +    610378 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   6516 8 +      8208 I
e Tapirus_terrestris.TapTer_scaffold_755                    387334 0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      118877 0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 72732 9 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                10910 0 +     41958 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6810879 0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629              18437 0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             30850 6 +     97271 I
e Sorex_araneus.JH798187.1                                13651056 93 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               3814 63 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11982 13 -     12148 T
e Scalopus_aquaticus.ScaAqu_scaffold_662                    153257 71 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                87918 0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570728 13 +  90668790 T
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20274421 0 -  38429054 C
e Pteropus_vampyrus.KN534172.1                                6949 0 -      8028 C
e Pteropus_alecto.KB030862.1                              22976896 0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         40349 0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            15188 0 -     21811 C
e Psammomys_obesus.NESX01036370.1                            10498 13 -     21651 T
e Prolemur_simus.MPIZ01000396.1                            2596839 0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                 13455 3 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             1869 0 +     22620 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Peromyscus_maniculatus.KI615324.1                       18194880 13 -  18517816 T
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12764 0 -     78924 C
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4721355 0 -   8748460 C
e Panthera_pardus.KV860321.1                                264476 0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  151267 0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       462454 0 -    559221 C
e Orycteropus_afer.OryAfe_flattened_line_144387               9955 3 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80254 13 +    102263 T
e Ondatra_zibethicus.OndZib_scaffold_46174                   25254 13 +     28053 T
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              506765 0 -   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9149506 0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20307615 0 +  31847680 C
e Nannospalax_galili.KL204047.1                            2034165 0 -   3037898 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189371 9 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_281845                          77 0 +      1835 C
e Myotis_lucifugus.GL429869.1                              3903925 0 -   4330536 C
e Myotis_davidii.KB100139.1                                1587833 0 -   6019432 C
e Myotis_brandtii.KE162005.1                                280571 0 -  10118263 C
e Mustela_putorius.JH418006.1                               301572 0 -  14710649 C
e Murina_feae.MurFea_scaffold_85699                           6928 0 +     14753 C
e Mungos_mungo.MunMun_flattened_line_23663                   35534 0 +     37127 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 141733 0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         6029 0 -      8324 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             34405 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1850724 0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11260586 13 -  27267610 T
e Micronycteris_hirsuta.MicHir_scaffold_52381                15766 0 -     19307 C
e Microgale_talazaci.MicTal_scaffold_6613                    22438 3 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182348 13 -  29670104 T
e Meriones_unguiculatus.MerUng_scaffold_7390                 32854 13 +    140813 T
e Mellivora_capensis.MelCap_flattened_line_69365             10159 0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                        10441 0 -    207569 C
e Manis_pentadactyla.KN006162.1                              50597 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18608 0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 90730 0 +     94391 C
e Lycaon_pictus.CM007581.1                                17955227 211 -  59628241 I
e Loxodonta_africana.GL010049.1                            4217433 3 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Leptonychotes_weddellii.KB714746.1                       3043161 0 +   3914936 C
e Lemur_catta.scaffold_24                                 15524159 0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    16479 0 -     42476 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276898 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  45128 0 +     55795 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                1000 3 +      7595 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               242434 0 +    327341 C
e Hapalemur_occidentalis.k141_907772                         13644 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                         13807 0 -     41752 C
e Hapalemur_griseus.k141_1511508                             13706 0 +     18253 C
e Hapalemur_gilberti.k141_488810                             12067 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           6918 0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Galagoides_demidoff.k141_1711393                            1699 0 +     41679 C
e Felis_nigripes.FelNig_flattened_line_20823                  9652 0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20195908 0 + 205367284 C
e Eulemur_sanfordi.k141_1122526                              13854 0 +    111500 C
e Eulemur_rufus.k141_1476633                                  4281 0 -     17153 C
e Eulemur_rubriventer.k141_774594                              228 0 +     13026 C
e Eulemur_mongoz.k141_232305                                 10737 0 +     97555 C
e Eulemur_macaco.k141_1562045                                12807 0 +     75513 C
e Eulemur_fulvus.k141_544389                                 14045 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                            12810 0 +     26330 C
e Eulemur_coronatus.k141_885031                              15606 0 -     25546 C
e Eulemur_collaris.k141_377015                                6582 0 -     16928 C
e Eulemur_albifrons.k141_342033                              13873 0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3328282 71 -   7059049 I
e Equus_przewalskii.KK951119.1                               33512 0 +    498745 C
e Equus_caballus.CM000403.2                               18531483 0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1283663 0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2145831 0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16329422 0 -  41312741 C
e Ellobius_talpinus.LOJH01081419.1                             538 13 +      8657 T
e Ellobius_lutescens.LOEQ01008920.1                          20407 13 -    110024 T
e Elephantulus_edwardii.JH947257.1                         1097777 3 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Eidolon_helvum.KE759718.1                                  10637 0 +     11740 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    6161 0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  673409 0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8630234 0 +  20541912 C
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            63648 8 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             28601 0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_37019               3028 88 -     19598 I
e Cricetulus_griseus.LT883664.1                           11667673 13 + 224834208 T
e Cricetomys_gambianus.CriGam_scaffold_18520                 50293 0 +     63868 C
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          14520 0 -     20389 C
e Condylura_cristata.JH655891.1                           17548142 67 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            173497 9 +    839153 I
e Choloepus_didactylus.ChoDid_scaffold_45914                 18421 8 +     19366 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870             641 8 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2585 0 -     25243 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     93132 0 +    217609 C
e Carollia_perspicillata.CarPer_scaffold_92756                5222 0 -     11696 C
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18500499 0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17958987 0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9034722 0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    185336 0 -    185531 C
e CanFam4.chr16                                           17799210 78 -  60362399 I
e Camelus_ferus.KB017975.1                                  403236 1 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2334953 0 -   7040546 C
e Camelus_bactrianus.KN276810.1                           10002495 0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  4868 0 +     43469 C
e Arctocebus_calabarensis.k141_2318572                       11569 0 +     14667 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      12706 8 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      185460 0 +    412891 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74597 0 -     89534 C
e Ailurus_fulgens.LNAC01001112.1                             79464 0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9510688 0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     70906 13 +     87051 T
e Acinonyx_jubatus.LLWD01001279.1                           827414 0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6907 1 +     62944 g
s Gorilla_beringei.k141_3596273                              16162 1 -     32273 g
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186338299 1 + 186649187 g
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Pan_paniscus.KQ411613.1                                    44250 1 +     80009 g
i Pan_paniscus.KQ411613.1                                I 116 C 0
s Pan_troglodytes.CM009242.2                             189143153 1 + 189151597 g
i Pan_troglodytes.CM009242.2                             C 0 C 0
e Echinops_telfairi.JH980293.1                            48780689 3 + 111700974 I
e Otolemur_garnettii.GL873799.1                             696396 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         4233 0 +      8798 C
e Galago_senegalensis.k141_631886                             4398 0 +     11339 C
e Galago_moholi.ctg2040                                     426708 0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          56091 0 -     80660 C
e Sapajus_apella.ctg103                                    5420683 0 -   5703754 C
e Saimiri_ustus.k141_1484609                                 23480 0 -     61129 C
e Saimiri_sciureus.k141_2278166                               3335 0 -     23631 C
e Saimiri_oerstedii.k141_1487881                             40263 0 -     64574 C
e Saimiri_macrodon.k141_716185                               23584 0 +     45824 C
e Saimiri_cassiquiarensis.k141_2188234                       23489 0 +     46362 C
e Saimiri_boliviensis.NW_024100920.1                     119951150 0 - 121099817 C
e Saguinus_mystax.k141_374627                                 8408 0 -      9399 C
e Saguinus_midas.LG03                                    209469773 0 + 209938924 C
e Saguinus_labiatus.k141_285685                               8447 0 +      8564 C
e Saguinus_inustus.k141_3945547                                282 0 -      8737 C
e Saguinus_imperator.k141_57697                                207 0 +      1030 C
e Saguinus_bicolor.k141_8081                                   422 0 +     42994 C
e Mico_schneideri.k141_1950671                                      5814 239 -      7356 I
e Mico_humeralifer.k141_1976199                               4875 3 +     18990 I
e Mico_argentatus.k141_1239457                                5802 239 -      7380 I
e Leontopithecus_rosalia.k141_464620                         25723 227 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    29250 0 +     38576 C
e Leontocebus_nigricollis.k141_4610752                        7834 0 +     35603 C
e Leontocebus_illigeri.k141_1304848                            146 0 -     35062 C
e Leontocebus_fuscicollis.k141_1820339                        7806 0 +     64341 C
e Chiropotes_albinasus.k141_2206961                            428 0 -     15524 C
e Cebus_unicolor.k141_1837183                                  562 0 +     14051 C
e Cebus_olivaceus.k141_1764483                                 837 0 +     28840 C
e Cebus_albifrons.Contig27                                25652011 440 +  26074798 I
e Cebuella_pygmaea.k141_1309012                               5985 245 -      7577 I
e Cebuella_niveiventris.k141_1251222                          9887 275 -     11392 I
e Callithrix_kuhlii.k119_1164682                             11973 0 -     12001 C
e Callithrix_jacchus.pat_scaffold_3                       23590442 239 - 189096842 I
e Callithrix_geoffroyi.k119_512088                            5228 0 +      5267 C
e Callimico_goeldii.k141_1091182                             24996 0 +     31915 C
e Callibella_humilis.k141_1278103                             5262 265 -     10423 I
e Aotus_vociferans.k141_344750                               28865 0 -     47192 C
e Aotus_trivirgatus.k141_2152450                             15741 0 -     34685 C
e Aotus_nancymaae.KZ198451.1                               4298131 0 -   5030052 C
e Aotus_griseimembra.k141_2240599                            15743 0 -     34016 C
e Aotus_azarae.k141_3104676                                  15707 0 -     33861 C
e Alouatta_seniculus.k141_117119                             14920 0 +     50774 C
e Alouatta_puruensis.k141_362188                               468 0 +      5663 C
e Alouatta_palliata.k141_2135620                              3755 0 +     47717 C
e Alouatta_nigerrima.k141_3472759                            18372 0 -     18578 C
e Alouatta_macconnelli.k141_918386                             786 0 -      9457 C
e Alouatta_juara.k141_1509701                                25065 0 +     25266 C
e Alouatta_discolor.k141_566626                              11239 3 +     28687 I
e Alouatta_caraya.k141_1701091                                 789 0 -     36483 C
e Alouatta_belzebul.k141_3560514                              7680 0 +     51355 C
e Mus_pahari.LT608297.1                                   31355125 13 -  89631738 T
e Mus_spretus.CM004101.1                                  90752527 13 - 130317789 T
e Mus_musculus.chr8                                       87650466 13 - 129401213 T
e Mus_caroli.LT608237.1                                   84361468 13 - 120012414 T
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Loris_tardigradus.ctg83                                  1004777 0 +   6120653 C
e Loris_lydekkerianus.k141_2539221                            5957 0 +     11245 C
e Perodicticus_potto.k141_1092580                             8615 0 +     25941 C
e Perodicticus_ibeanus.k141_855320                           10209 0 +     13100 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      14994 0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5478 0 +     86975 C
e Xerus_inauris.XerIna_scaffold_2302                          1173 0 +    224448 C
e Vulpes_lagopus.VulLag_flattened_line_30954                 10902 0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5371995 0 -   5488506 C
e Varecia_variegata.k141_1128296                             11561 0 +     24756 C
e Varecia_rubra.k141_590885                                  11502 0 +     50397 C
e Ursus_maritimus.KK499267.1                               4850549 0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   53362 63 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     9343 0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2155690 0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4293354 3 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Trachypithecus_pileatus.k141_2007326                        8319 109 +     20839 I
e Trachypithecus_phayrei.ctg124                            5939067 110 +   6242583 I
e Trachypithecus_obscurus.k141_190785                        24965 110 +     32220 I
e Trachypithecus_melamera.k141_434728                         6652 110 +      9834 I
e Trachypithecus_leucocephalus.k141_587342                    7496 94 -     10723 I
e Trachypithecus_laotum.k141_907409                           8793 94 -     21137 I
e Trachypithecus_hatinhensis.k141_143409                     15065 110 -     18194 I
e Trachypithecus_germaini.k141_912491                        15121 110 -     27529 I
e Trachypithecus_geei.k141_277701                            47650 109 -     60166 I
e Trachypithecus_francoisi.k141_1412647                       7526 94 -     19997 I
e Trachypithecus_cristatus.k141_580354                       11099 110 +     19930 I
e Trachypithecus_crepusculus.k141_582567                       112 110 -     12674 I
e Trachypithecus_auratus.k141_722599                         10998 110 -     20410 I
e Tonatia_saurophila.TonSau_scaffold_294                     81307 0 +    610378 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   6516 8 +      8208 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              105544 0 +    114563 C
e Theropithecus_gelada.CM009954.1                        186428703 0 + 186847797 C
e Tarsius_wallacei.k141_254427                                1357 0 -     16117 C
e Tarsius_lariang.k141_2201908                               26560 105 +     70052 T
e Tapirus_terrestris.TapTer_scaffold_755                    387334 0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      118877 0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 72732 9 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                10910 0 +     41958 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6810879 0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629              18437 0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             30850 6 +     97271 I
e Spermophilus_dauricus.KZ294078.1                         1954045 0 -   3870691 C
e Sorex_araneus.JH798187.1                                13651056 93 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               3814 63 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11982 13 -     12148 T
e Semnopithecus_vetulus.k141_910252                            219 0 +     13763 C
e Semnopithecus_schistaceus.k141_1572284                       358 0 -     12762 C
e Semnopithecus_priam.k141_638794                             6947 110 -     19483 I
e Semnopithecus_johnii.k141_670120                            7426 109 +     27826 I
e Semnopithecus_hypoleucos.k141_1615806                      26907 110 +     39453 I
e Semnopithecus_entellus.k141_11662                          19702 3 -     19888 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    153257 71 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                87918 0 -     96226 C
e Rhinopithecus_strykeri.ctg102                            7671884 0 +   7961872 C
e Rhinopithecus_roxellana.NC_044550.1                     91236232 0 - 195417433 C
e Rhinopithecus_bieti.k119_217274                             6879 0 -     11128 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570728 13 +  90668790 T
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Pygathrix_nigripes_a.k141_215492                             15165 110 -     72585 I
e Pygathrix_nigripes_b.ctg100                                 7609313 110 +   7812017 I
e Pygathrix_cinerea.k141_1153803                             15193 110 -     91421 I
e Puma_concolor.QAVW01001104.1                            20274421 0 -  38429054 C
e Pteropus_vampyrus.KN534172.1                                6949 0 -      8028 C
e Pteropus_alecto.KB030862.1                              22976896 0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         40349 0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            15188 0 -     21811 C
e Psammomys_obesus.NESX01036370.1                            10498 13 -     21651 T
e Propithecus_verreauxi.k141_956661                           4892 0 -      6182 C
e Propithecus_tattersalli.k141_790011                        28669 0 -     67325 C
e Propithecus_perrieri.k141_1200571                           4844 0 -     24134 C
e Propithecus_edwardsi.k141_1176054                          26657 0 +     35766 C
e Propithecus_diadema.k141_58108                              1179 0 -     13098 C
e Propithecus_coronatus.k141_347390                          29136 0 +     38485 C
e Propithecus_coquerelli.NW_012148875.1                     990824 0 +   2598838 C
e Prolemur_simus.MPIZ01000396.1                            2596839 0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                 13455 3 -     22811 I
e Presbytis_mitrata.k141_1087752                              5184 106 +     19060 I
e Presbytis_comata.k141_677006                               73364 106 -     81375 I
e Pongo_pygmaeus.ctg66                                     9570896 0 +   9816681 C
e Pongo_abelii.CM009266.2                                189131289 0 + 189387572 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             1869 0 +     22620 C
e Piliocolobus_tephrosceles.PDMG02000141.1                14296080 106 -  14605196 I
e Piliocolobus_kirkii.k141_448987                            39842 106 +     51399 I
e Piliocolobus_gordonorum.k141_381342                        38426 106 +     89929 I
e Piliocolobus_badius.k141_1234363                           43695 90 +     62158 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     28223 0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18194880 13 -  18517816 T
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12764 0 -     78924 C
e Papio_ursinus.k141_3428135                                  9137 0 +      9205 C
e Papio_papio.k141_802527                                     9068 0 +     27711 C
e Papio_kindae.k141_1936966                                   5775 0 +     41871 C
e Papio_hamadryas.Contig39                                20563843 0 +  20919399 C
e Papio_cynocephalus.k141_4307930                             7031 0 +     20448 C
e Papio_anubis.CM001495.2                                183443385 0 + 183742232 C
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4721355 0 -   8748460 C
e Panthera_pardus.KV860321.1                                264476 0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  151267 0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       462454 0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                        67147424 0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               9955 3 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80254 13 +    102263 T
e Ondatra_zibethicus.OndZib_scaffold_46174                   25254 13 +     28053 T
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              506765 0 -   2017862 C
e Octodon_degus.JH651603.1                                  746953 0 +  11899542 C
e Ochotona_princeps.JH802162.1                             1363621 0 +   3988456 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761675 0 + 199412804 C
e Nycticebus_coucang.k141_1127096                              245 0 +      2075 C
e Nycticebus_bengalensis.LG01                            102586321 0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9149506 0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20307615 0 +  31847680 C
e Nasalis_larvatus.k141_413338                               15184 110 +     21681 I
e Nannospalax_galili.KL204047.1                            2034165 0 -   3037898 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189371 9 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_281845                          77 0 +      1835 C
e Myotis_lucifugus.GL429869.1                              3903925 0 -   4330536 C
e Myotis_davidii.KB100139.1                                1587833 0 -   6019432 C
e Myotis_brandtii.KE162005.1                                280571 0 -  10118263 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     71343 0 -     80779 C
e Mustela_putorius.JH418006.1                               301572 0 -  14710649 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              5055 0 +     14296 C
e Murina_feae.MurFea_scaffold_85699                           6928 0 +     14753 C
e Mungos_mungo.MunMun_flattened_line_23663                   35534 0 +     37127 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 141733 0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Mirza_zaza.k141_952172                                      9128 0 -     37649 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         6029 0 -      8324 C
e Miopithecus_ogouensis.k141_534055                           9292 0 -     28506 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             34405 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1850724 0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11260586 13 -  27267610 T
e Micronycteris_hirsuta.MicHir_scaffold_52381                15766 0 -     19307 C
e Microgale_talazaci.MicTal_scaffold_6613                    22438 3 -    145209 I
e Microcebus_murinus.CM007674.1                           18291583 0 -  93316391 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182348 13 -  29670104 T
e Meriones_unguiculatus.MerUng_scaffold_7390                 32854 13 +    140813 T
e Mellivora_capensis.MelCap_flattened_line_69365             10159 0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                        10441 0 -    207569 C
e Marmota_marmota.CZRN01000018.1                          33103190 0 -  40650429 C
e Manis_pentadactyla.KN006162.1                              50597 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18608 0 +    737560 C
e Mandrillus_sphinx.Contig270                               351707 0 +    752769 C
e Mandrillus_leucophaeus.scaffold280                      23937583 0 -  24302211 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 90730 0 +     94391 C
e Macaca_tonkeana.k141_1498238                               25995 0 -     45290 C
e Macaca_thibetana.k99_256239                                 5370 0 -     24072 C
e Macaca_silenus.Contig273                                  329923 0 -    668171 C
e Macaca_siberu.k141_635500                                   7057 0 -     14993 C
e Macaca_radiata.k141_3680011                                 7257 0 +     20474 C
e Macaca_nigra.k141_1655396                                  80256 0 +     89720 C
e Macaca_nemestrina.KQ007038.1                            25458060 0 -  25927173 C
e Macaca_mulatta.NC_041758.1                             186839497 0 + 187317192 C
e Macaca_maura.k141_2733130                                  24408 0 +     37952 C
e Macaca_leonina.k141_3550399                                15843 0 -     29190 C
e Macaca_fuscata.k119_255327                                  6370 0 -     23192 C
e Macaca_fascicularis.k141_814140                            80683 0 -    114318 C
e Macaca_cyclopis.k119_18836                                 12899 0 -     26193 C
e Macaca_assamensis.Contig5                               59676383 0 +  60120075 C
e Macaca_arctoides.k141_2326796                               7124 0 +     40492 C
e Lycaon_pictus.CM007581.1                                17955227 211 -  59628241 I
e Loxodonta_africana.GL010049.1                            4217433 3 -  43346337 I
e Lophocebus_aterrimus.ctg367                              1437308 0 +   1826925 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     6545 16 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3043161 0 +   3914936 C
e Lepilemur_septentrionalis.k141_185316                      27049 0 +     54090 C
e Lepilemur_ruficaudatus.k141_121139                          1651 0 +     25010 C
e Lepilemur_dorsalis.k141_577674                             29113 0 +     45836 C
e Lepilemur_ankaranensis.k141_596936                         11052 0 -     23766 C
e Lemur_catta.scaffold_24                                 15524159 0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    16479 0 -     42476 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276898 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Indri_indri.k141_3655594                                   22601 0 +     31101 C
e Ictidomys_tridecemlineatus.JH393364.1                    7520990 0 -   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                      83211 0 +    135385 C
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  45128 0 +     55795 C
e Hoolock_leuconedys.ctg274                                    434967 110 +    630532 T
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                1000 3 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20662322 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               242434 0 +    327341 C
e Hapalemur_occidentalis.k141_907772                         13644 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                         13807 0 -     41752 C
e Hapalemur_griseus.k141_1511508                             13706 0 +     18253 C
e Hapalemur_gilberti.k141_488810                             12067 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           6918 0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32707 1 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            31466 0 +     49224 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Galeopterus_variegatus.GalVar_scaffold_108840               1280 0 -      9135 C
e Galagoides_demidoff.k141_1711393                            1699 0 +     41679 C
e Fukomys_damarensis.KN121974.1                             850533 0 +   3816255 C
e Felis_nigripes.FelNig_flattened_line_20823                  9652 0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20195908 0 + 205367284 C
e Eulemur_sanfordi.k141_1122526                              13854 0 +    111500 C
e Eulemur_rufus.k141_1476633                                  4281 0 -     17153 C
e Eulemur_rubriventer.k141_774594                              228 0 +     13026 C
e Eulemur_mongoz.k141_232305                                 10737 0 +     97555 C
e Eulemur_macaco.k141_1562045                                12807 0 +     75513 C
e Eulemur_fulvus.k141_544389                                 14045 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                            12810 0 +     26330 C
e Eulemur_coronatus.k141_885031                              15606 0 -     25546 C
e Eulemur_collaris.k141_377015                                6582 0 -     16928 C
e Eulemur_albifrons.k141_342033                              13873 0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erythrocebus_patas.Contig38                             21205359 0 -  21539334 C
e Erinaceus_europaeus.JH835339.1                           3328282 71 -   7059049 I
e Equus_przewalskii.KK951119.1                               33512 0 +    498745 C
e Equus_caballus.CM000403.2                               18531483 0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1283663 0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2145831 0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16329422 0 -  41312741 C
e Ellobius_talpinus.LOJH01081419.1                             538 13 +      8657 T
e Ellobius_lutescens.LOEQ01008920.1                          20407 13 -    110024 T
e Elephantulus_edwardii.JH947257.1                         1097777 3 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Eidolon_helvum.KE759718.1                                  10637 0 +     11740 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    36499 0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    6161 0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  673409 0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8630234 0 +  20541912 C
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Daubentonia_madagascariensis.ctg71                      12537376 0 -  12879189 C
e Dasypus_novemcinctus.JH564415.1                            63648 8 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35864 0 +     51376 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    837179 0 +   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129             28601 0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_37019               3028 88 -     19598 I
e Cricetulus_griseus.LT883664.1                           11667673 13 + 224834208 T
e Cricetomys_gambianus.CriGam_scaffold_18520                 50293 0 +     63868 C
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          14520 0 -     20389 C
e Condylura_cristata.JH655891.1                           17548142 67 -  53390261 I
e Colobus_polykomos.k141_906115                              37131 106 +     84244 I
e Colobus_guereza.LG01                                   199948964 0 + 200372422 C
e Colobus_angolensis.KN981557.1                            1910597 106 +   2368649 I
e Choloepus_hoffmanni.KN194906.1                            173497 9 +    839153 I
e Choloepus_didactylus.ChoDid_scaffold_45914                 18421 8 +     19366 I
e Chlorocebus_sabaeus.CM001947.1                         135422191 0 + 135778131 C
e Chlorocebus_pygerythrus.k141_1025673                       15191 0 -     50209 C
e Chlorocebus_aethiops.ctg25                              18428754 0 -  18827391 C
e Chinchilla_lanigera.JH722012.1                           1252905 0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           16525 0 +     57038 C
e Cheirogaleus_major.k141_333249                             21160 0 -     52598 C
e Chaetophractus_vellerosus.ChaVel_scaffold_138870             641 8 -      8501 I
e Cercopithecus_roloway.k141_2581234                           817 0 +     14005 C
e Cercopithecus_pogonias.k141_822820                         14770 0 +     17596 C
e Cercopithecus_petaurista.k141_807961                       14794 0 -     27947 C
e Cercopithecus_nictitans.k141_1119862                         245 0 +     13442 C
e Cercopithecus_neglectus.k141_2526306                       39994 0 -     53127 C
e Cercopithecus_mona.ctg39                                21222876 0 -  21565898 C
e Cercopithecus_albogularis.ctg5                                38817184 0 +  39242232 C
e Cercopithecus_lowei.k141_1854285                            3645 0 -     17152 C
e Cercopithecus_hamlyni.k141_187466                          14781 0 -     27936 C
e Cercopithecus_diana.k141_1150327                            6858 0 -     20078 C
e Cercopithecus_cephus.k141_1078548                          12105 0 +     29689 C
e Cercopithecus_ascanius.k141_1024104                         9125 0 -     20310 C
e Cercocebus_torquatus.k141_3057011                           8957 0 +     27781 C
e Cercocebus_lunulatus.k141_3342297                            924 0 -     14043 C
e Cercocebus_chrysogaster.k141_1540778                         267 0 +     17872 C
e Cercocebus_atys.KQ010504.1                               4475763 0 +   4669795 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2585 0 -     25243 C
e Cephalopachus_bancanus.k141_1423433                         5567 114 +     31688 T
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     93132 0 +    217609 C
e Castor_canadensis.CasCan_scaffold_2074                    137174 0 +    179628 C
e Carollia_perspicillata.CarPer_scaffold_92756                5222 0 -     11696 C
e Carlito_syrichta.NW_007259797.1                           156069 3 -    496798 I
e Capromys_pilorides.CapPil_scaffold_65020                    1157 0 -     12242 C
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18500499 0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17958987 0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9034722 0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    185336 0 -    185531 C
e CanFam4.chr16                                           17799210 78 -  60362399 I
e Camelus_ferus.KB017975.1                                  403236 1 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2334953 0 -   7040546 C
e Camelus_bactrianus.KN276810.1                           10002495 0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              54407 0 +     85213 C
e Avahi_laniger.k141_765380                                  53780 0 -     92717 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  4868 0 +     43469 C
e Arctocebus_calabarensis.k141_2318572                       11569 0 +     14667 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      12706 8 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      185460 0 +    412891 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Allochrocebus_solatus.k141_166128                           6102 0 -     12518 C
e Allochrocebus_preussi.k141_1442296                          5250 0 -     18505 C
e Allochrocebus_lhoesti.k141_4309873                         14752 0 -     28001 C
e Allenopithecus_nigroviridis.k141_3361533                   14838 0 -     52922 C
e Allactaga_bullata.AllBul_scaffold_9566                     74597 0 -     89534 C
e Ailurus_fulgens.LNAC01001112.1                             79464 0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9510688 0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     70906 13 +     87051 T
e Acinonyx_jubatus.LLWD01001279.1                           827414 0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6908 1 +     62944 a
s Allenopithecus_nigroviridis.k141_3361533                   14838 1 -     52922 a
i Allenopithecus_nigroviridis.k141_3361533               C 0 T 123
s Allochrocebus_lhoesti.k141_4309873                         14752 1 -     28001 a
i Allochrocebus_lhoesti.k141_4309873                     C 0 T 101
s Allochrocebus_preussi.k141_1442296                          5250 1 -     18505 a
i Allochrocebus_preussi.k141_1442296                     C 0 T 103
s Allochrocebus_solatus.k141_166128                           6102 1 -     12518 a
i Allochrocebus_solatus.k141_166128                      C 0 T 101
s Alouatta_belzebul.k141_3560514                              7680 1 +     51355 a
i Alouatta_belzebul.k141_3560514                         C 0 I 3
s Alouatta_caraya.k141_1701091                                 789 1 -     36483 a
i Alouatta_caraya.k141_1701091                           C 0 I 3
s Alouatta_juara.k141_1509701                                25065 1 +     25266 a
i Alouatta_juara.k141_1509701                            C 0 I 3
s Alouatta_macconnelli.k141_918386                             786 1 -      9457 a
i Alouatta_macconnelli.k141_918386                       C 0 I 3
s Alouatta_nigerrima.k141_3472759                            18372 1 -     18578 a
i Alouatta_nigerrima.k141_3472759                        C 0 I 3
s Alouatta_palliata.k141_2135620                              3755 1 +     47717 a
i Alouatta_palliata.k141_2135620                         C 0 I 4
s Alouatta_puruensis.k141_362188                               468 1 +      5663 a
i Alouatta_puruensis.k141_362188                         C 0 I 3
s Alouatta_seniculus.k141_117119                             14920 1 +     50774 A
i Alouatta_seniculus.k141_117119                         C 0 I 3
s Aotus_azarae.k141_3104676                                  15707 1 -     33861 a
i Aotus_azarae.k141_3104676                              C 0 I 3
s Aotus_griseimembra.k141_2240599                            15743 1 -     34016 a
i Aotus_griseimembra.k141_2240599                        C 0 I 3
s Aotus_nancymaae.KZ198451.1                               4298131 1 -   5030052 a
i Aotus_nancymaae.KZ198451.1                             C 0 I 3
s Aotus_trivirgatus.k141_2152450                             15741 1 -     34685 a
i Aotus_trivirgatus.k141_2152450                         C 0 I 3
s Aotus_vociferans.k141_344750                               28865 1 -     47192 a
i Aotus_vociferans.k141_344750                           C 0 I 3
s Avahi_laniger.k141_765380                                  53780 1 -     92717 G
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54407 1 +     85213 G
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             5527 1 -     10423 a
i Callibella_humilis.k141_1278103                        I 265 I 3
s Callimico_goeldii.k141_1091182                             24996 1 +     31915 a
i Callimico_goeldii.k141_1091182                         C 0 I 3
s Callithrix_geoffroyi.k119_512088                            5228 1 +      5267 g
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590681 1 - 189096842 a
i Callithrix_jacchus.pat_scaffold_3                      I 239 I 3
s Callithrix_kuhlii.k119_1164682                             11973 1 -     12001 G
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1157 1 -     12242 A
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007247396.1                           201448 1 +    308752 g
i Carlito_syrichta.NW_007247396.1                        I 3 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137174 1 +    179628 A
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                         10162 1 -     11392 a
i Cebuella_niveiventris.k141_1251222                     I 275 I 3
s Cebuella_pygmaea.k141_1309012                               6230 1 -      7577 a
i Cebuella_pygmaea.k141_1309012                          I 245 I 3
s Cebus_albifrons.Contig27                                25652451 1 +  26074798 g
i Cebus_albifrons.Contig27                               I 440 C 0
s Cebus_olivaceus.k141_1764483                                 837 1 +     28840 a
i Cebus_olivaceus.k141_1764483                           C 0 T 415
s Cebus_unicolor.k141_1837183                                  562 1 +     14051 a
i Cebus_unicolor.k141_1837183                            C 0 I 3
s Cephalopachus_bancanus.k141_1423433                         5453 1 +     31688 g
i Cephalopachus_bancanus.k141_1423433                    T 114 C 0
s Cercocebus_atys.KQ010504.1                               4475763 1 +   4669795 a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                         267 1 +     17872 a
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                            924 1 -     14043 a
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           8957 1 +     27781 a
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         9125 1 -     20310 a
i Cercopithecus_ascanius.k141_1024104                    C 0 T 103
s Cercopithecus_cephus.k141_1078548                          12105 1 +     29689 a
i Cercopithecus_cephus.k141_1078548                      C 0 T 104
s Cercopithecus_diana.k141_1150327                            6858 1 -     20078 a
i Cercopithecus_diana.k141_1150327                       C 0 T 103
s Cercopithecus_hamlyni.k141_187466                          14781 1 -     27936 a
i Cercopithecus_hamlyni.k141_187466                      C 0 T 103
s Cercopithecus_lowei.k141_1854285                            3645 1 -     17152 a
i Cercopithecus_lowei.k141_1854285                       C 0 T 103
s Cercopithecus_albogularis.ctg5                                38817184 1 +  39242232 a
i Cercopithecus_albogularis.ctg5                               C 0 T 103
s Cercopithecus_mona.ctg39                                21222876 1 -  21565898 a
i Cercopithecus_mona.ctg39                               C 0 T 103
s Cercopithecus_neglectus.k141_2526306                       39994 1 -     53127 a
i Cercopithecus_neglectus.k141_2526306                   C 0 T 103
s Cercopithecus_nictitans.k141_1119862                         245 1 +     13442 a
i Cercopithecus_nictitans.k141_1119862                   C 0 T 103
s Cercopithecus_petaurista.k141_807961                       14794 1 -     27947 a
i Cercopithecus_petaurista.k141_807961                   C 0 T 103
s Cercopithecus_pogonias.k141_822820                         14770 1 +     17596 a
i Cercopithecus_pogonias.k141_822820                     C 0 T 103
s Cercopithecus_roloway.k141_2581234                           817 1 +     14005 a
i Cercopithecus_roloway.k141_2581234                     C 0 T 103
s Cheirogaleus_major.k141_333249                             21160 1 -     52598 G
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16525 1 +     57038 g
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1252905 1 +   2543920 a
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2206961                            428 1 -     15524 a
i Chiropotes_albinasus.k141_2206961                      C 0 I 3
s Chlorocebus_aethiops.ctg25                              18428754 1 -  18827391 a
i Chlorocebus_aethiops.ctg25                             C 0 T 103
s Chlorocebus_pygerythrus.k141_1025673                       15191 1 -     50209 a
i Chlorocebus_pygerythrus.k141_1025673                   C 0 T 103
s Chlorocebus_sabaeus.CM001947.1                         135422191 1 + 135778131 a
i Chlorocebus_sabaeus.CM001947.1                         C 0 T 103
s Colobus_angolensis.KN981557.1                            1910703 1 +   2368649 a
i Colobus_angolensis.KN981557.1                          I 106 T 106
s Colobus_guereza.LG01                                   199948964 1 + 200372422 A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37237 1 +     84244 a
i Colobus_polykomos.k141_906115                          I 106 T 106
s Ctenodactylus_gundi.CteGun_scaffold_65                    837179 1 +   1526836 A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35864 1 +     51376 A
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537376 1 -  12879189 C
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36499 1 +     67921 A
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Erythrocebus_patas.Contig38                             21205359 1 -  21539334 a
i Erythrocebus_patas.Contig38                            C 0 T 101
s Fukomys_damarensis.KN121974.1                             850533 1 +   3816255 g
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg2040                                     426708 1 -    453645 G
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4398 1 +     11339 g
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1280 1 -      9135 g
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            31466 1 +     49224 G
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              16163 1 -     32273 a
i Gorilla_beringei.k141_3596273                          C 0 T 118
s Gorilla_gorilla.LT578341.1                             186338300 1 + 186649187 a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   32708 1 +     78134 G
i Graphiurus_murinus.GraMur_scaffold_10447               I 1 C 0
s Heterocephalus_glaber.JH602082.1                        20662322 1 +  22651954 g
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hoolock_leuconedys.ctg274                                    434857 1 +    630532 g
i Hoolock_leuconedys.ctg274                                 T 110 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83211 1 +    135385 A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7520990 1 -   7955117 g
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   22601 1 +     31101 g
i Indri_indri.k141_3655594                               C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7806 1 +     64341 a
i Leontocebus_fuscicollis.k141_1820339                   C 0 I 3
s Leontocebus_illigeri.k141_1304848                            146 1 -     35062 a
i Leontocebus_illigeri.k141_1304848                      C 0 I 3
s Leontocebus_nigricollis.k141_4610752                        7834 1 +     35603 a
i Leontocebus_nigricollis.k141_4610752                   C 0 I 3
s Leontopithecus_chrysomelas.k141_1519602                    29250 1 +     38576 a
i Leontopithecus_chrysomelas.k141_1519602                C 0 I 3
s Leontopithecus_rosalia.k141_464620                         25950 1 +     66356 a
i Leontopithecus_rosalia.k141_464620                     I 227 T 227
s Lepilemur_ankaranensis.k141_596936                         11052 1 -     23766 G
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29113 1 +     45836 G
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1651 1 +     25010 G
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27049 1 +     54090 G
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6561 1 -     14121 g
i Lepus_americanus.LepAme_scaffold_107385                I 16 C 0
s Lophocebus_aterrimus.ctg367                              1437308 1 +   1826925 a
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5957 1 +     11245 G
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004777 1 +   6120653 G
i Loris_tardigradus.ctg83                                C 0 C 0
s Macaca_arctoides.k141_2326796                               7124 1 +     40492 a
i Macaca_arctoides.k141_2326796                          C 0 T 103
s Macaca_assamensis.Contig5                               59676383 1 +  60120075 a
i Macaca_assamensis.Contig5                              C 0 T 103
s Macaca_cyclopis.k119_18836                                 12899 1 -     26193 a
i Macaca_cyclopis.k119_18836                             C 0 T 106
s Macaca_fascicularis.k141_814140                            80683 1 -    114318 a
i Macaca_fascicularis.k141_814140                        C 0 T 106
s Macaca_fuscata.k119_255327                                  6370 1 -     23192 a
i Macaca_fuscata.k119_255327                             C 0 T 102
s Macaca_leonina.k141_3550399                                15843 1 -     29190 a
i Macaca_leonina.k141_3550399                            C 0 T 106
s Macaca_maura.k141_2733130                                  24408 1 +     37952 a
i Macaca_maura.k141_2733130                              C 0 T 106
s Macaca_mulatta.NC_041758.1                             186839497 1 + 187317192 a
i Macaca_mulatta.NC_041758.1                             C 0 T 106
s Macaca_nemestrina.KQ007038.1                            25458060 1 -  25927173 a
i Macaca_nemestrina.KQ007038.1                           C 0 T 106
s Macaca_nigra.k141_1655396                                  80256 1 +     89720 a
i Macaca_nigra.k141_1655396                              C 0 T 106
s Macaca_radiata.k141_3680011                                 7257 1 +     20474 a
i Macaca_radiata.k141_3680011                            C 0 T 106
s Macaca_siberu.k141_635500                                   7057 1 -     14993 a
i Macaca_siberu.k141_635500                              C 0 T 106
s Macaca_silenus.Contig273                                  329923 1 -    668171 a
i Macaca_silenus.Contig273                               C 0 T 106
s Macaca_thibetana.k99_256239                                 5370 1 -     24072 a
i Macaca_thibetana.k99_256239                            C 0 T 103
s Macaca_tonkeana.k141_1498238                               25995 1 -     45290 a
i Macaca_tonkeana.k141_1498238                           C 0 T 106
s Mandrillus_leucophaeus.scaffold280                      23937583 1 -  24302211 a
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               351707 1 +    752769 a
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33103190 1 -  40650429 g
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mico_argentatus.k141_1239457                                6041 1 -      7380 a
i Mico_argentatus.k141_1239457                           I 239 I 3
s Mico_humeralifer.k141_2457295                                270 1 +      1079 a
i Mico_humeralifer.k141_2457295                          I 6 I 3
s Mico_schneideri.k141_1950671                                      6053 1 -      7356 a
i Mico_schneideri.k141_1950671                                 I 239 I 3
s Microcebus_murinus.CM007674.1                           18291583 1 -  93316391 g
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9292 1 -     28506 a
i Miopithecus_ogouensis.k141_534055                      C 0 T 87
s Mirza_zaza.k141_952172                                      9128 1 -     37649 A
i Mirza_zaza.k141_952172                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              5055 1 +     14296 G
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71343 1 -     80779 A
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Nasalis_larvatus.k141_413338                               15294 1 +     21681 a
i Nasalis_larvatus.k141_413338                           I 110 T 110
s Nycticebus_bengalensis.LG01                            102586321 1 - 196305487 G
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              245 1 +      2075 g
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761675 1 + 199412804 G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1363621 1 +   3988456 g
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  746953 1 +  11899542 a
i Octodon_degus.JH651603.1                               C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147424 1 + 174332312 g
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Pan_paniscus.KQ411613.1                                    44251 1 +     80009 a
i Pan_paniscus.KQ411613.1                                C 0 T 117
s Pan_troglodytes.CM009242.2                             189143154 1 + 189151597 a
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                183443385 1 + 183742232 a
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7031 1 +     20448 a
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563843 1 +  20919399 a
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   5775 1 +     41871 a
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     9068 1 +     27711 a
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  9137 1 +      9205 a
i Papio_ursinus.k141_3428135                             C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10209 1 +     13100 G
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8615 1 +     25941 G
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28223 1 -     29689 G
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Piliocolobus_badius.k141_1234363                           43785 1 +     62158 a
i Piliocolobus_badius.k141_1234363                       I 90 C 0
s Piliocolobus_gordonorum.k141_381342                        38532 1 +     89929 a
i Piliocolobus_gordonorum.k141_381342                    I 106 T 106
s Piliocolobus_kirkii.k141_448987                            39948 1 +     51399 a
i Piliocolobus_kirkii.k141_448987                        I 106 T 106
s Piliocolobus_tephrosceles.PDMG02000141.1                14296186 1 -  14605196 a
i Piliocolobus_tephrosceles.PDMG02000141.1               I 106 T 106
s Pongo_abelii.CM009266.2                                189131289 1 + 189387572 a
i Pongo_abelii.CM009266.2                                C 0 T 109
s Pongo_pygmaeus.ctg66                                     9570896 1 +   9816681 a
i Pongo_pygmaeus.ctg66                                   C 0 T 108
s Presbytis_comata.k141_677006                               73470 1 -     81375 a
i Presbytis_comata.k141_677006                           I 106 T 106
s Presbytis_mitrata.k141_1087752                              5290 1 +     19060 a
i Presbytis_mitrata.k141_1087752                         I 106 T 106
s Propithecus_coquerelli.NW_012148875.1                     990824 1 +   2598838 g
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29136 1 +     38485 g
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1179 1 -     13098 G
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26657 1 +     35766 g
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4844 1 -     24134 G
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28669 1 -     67325 G
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4892 1 -      6182 G
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15303 1 -     91421 a
i Pygathrix_cinerea.k141_1153803                         I 110 T 110
s Pygathrix_nigripes_b.ctg100                                 7609423 1 +   7812017 a
i Pygathrix_nigripes_b.ctg100                               I 110 T 110
s Pygathrix_nigripes_a.k141_215492                             15275 1 -     72585 a
i Pygathrix_nigripes_a.k141_215492                         I 110 T 110
s Rhinopithecus_bieti.k119_217274                             6879 1 -     11128 g
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236232 1 - 195417433 g
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7671884 1 +   7961872 g
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_8081                                   422 1 +     42994 a
i Saguinus_bicolor.k141_8081                             C 0 I 3
s Saguinus_imperator.k141_57697                                207 1 +      1030 a
i Saguinus_imperator.k141_57697                          C 0 I 3
s Saguinus_inustus.k141_3945547                                282 1 -      8737 a
i Saguinus_inustus.k141_3945547                          C 0 I 3
s Saguinus_labiatus.k141_285685                               8447 1 +      8564 g
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469773 1 + 209938924 a
i Saguinus_midas.LG03                                    C 0 I 3
s Saguinus_mystax.k141_374627                                 8408 1 -      9399 a
i Saguinus_mystax.k141_374627                            C 0 I 3
s Saimiri_boliviensis.NW_024100920.1                     119951150 1 - 121099817 a
i Saimiri_boliviensis.NW_024100920.1                     C 0 I 3
s Saimiri_cassiquiarensis.k141_2188234                       23489 1 +     46362 a
i Saimiri_cassiquiarensis.k141_2188234                   C 0 I 3
s Saimiri_macrodon.k141_716185                               23584 1 +     45824 a
i Saimiri_macrodon.k141_716185                           C 0 I 3
s Saimiri_oerstedii.k141_1487881                             40263 1 -     64574 a
i Saimiri_oerstedii.k141_1487881                         C 0 I 3
s Saimiri_sciureus.k141_2278166                               3335 1 -     23631 a
i Saimiri_sciureus.k141_2278166                          C 0 I 3
s Saimiri_ustus.k141_1484609                                 23480 1 -     61129 a
i Saimiri_ustus.k141_1484609                             C 0 I 3
s Sapajus_apella.ctg103                                    5420683 1 -   5703754 g
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          56091 1 -     80660 a
i Sapajus_macrocephalus.k141_351809                      C 0 I 3
s Semnopithecus_entellus.k141_1672505                          167 1 -     12572 A
i Semnopithecus_entellus.k141_1672505                    I 3 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27017 1 +     39453 a
i Semnopithecus_hypoleucos.k141_1615806                  I 110 T 110
s Semnopithecus_johnii.k141_670120                            7535 1 +     27826 a
i Semnopithecus_johnii.k141_670120                       I 109 T 109
s Semnopithecus_priam.k141_638794                             7057 1 -     19483 a
i Semnopithecus_priam.k141_638794                        I 110 T 110
s Semnopithecus_schistaceus.k141_1572284                       358 1 -     12762 A
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                            219 1 +     13763 a
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1954045 1 -   3870691 g
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Tarsius_lariang.k141_2201908                               26455 1 +     70052 g
i Tarsius_lariang.k141_2201908                           T 105 C 0
s Tarsius_wallacei.k141_254427                                1357 1 -     16117 g
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428703 1 + 186847797 a
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105544 1 +    114563 G
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Trachypithecus_auratus.k141_722599                         11108 1 -     20410 a
i Trachypithecus_auratus.k141_722599                     I 110 T 110
s Trachypithecus_crepusculus.k141_582567                       222 1 -     12674 a
i Trachypithecus_crepusculus.k141_582567                 I 110 T 110
s Trachypithecus_cristatus.k141_580354                       11209 1 +     19930 a
i Trachypithecus_cristatus.k141_580354                   I 110 T 110
s Trachypithecus_francoisi.k141_1412647                       7620 1 -     19997 a
i Trachypithecus_francoisi.k141_1412647                  I 94 C 0
s Trachypithecus_geei.k141_277701                            47759 1 -     60166 a
i Trachypithecus_geei.k141_277701                        I 109 T 109
s Trachypithecus_germaini.k141_912491                        15231 1 -     27529 a
i Trachypithecus_germaini.k141_912491                    I 110 T 110
s Trachypithecus_hatinhensis.k141_143409                     15175 1 -     18194 a
i Trachypithecus_hatinhensis.k141_143409                 I 110 T 110
s Trachypithecus_laotum.k141_907409                           8887 1 -     21137 a
i Trachypithecus_laotum.k141_907409                      I 94 C 0
s Trachypithecus_leucocephalus.k141_587342                    7590 1 -     10723 a
i Trachypithecus_leucocephalus.k141_587342               I 94 C 0
s Trachypithecus_melamera.k141_434728                         6762 1 +      9834 a
i Trachypithecus_melamera.k141_434728                    I 110 T 110
s Trachypithecus_obscurus.k141_190785                        25075 1 +     32220 a
i Trachypithecus_obscurus.k141_190785                    I 110 T 110
s Trachypithecus_phayrei.ctg124                            5939177 1 +   6242583 a
i Trachypithecus_phayrei.ctg124                          I 110 T 110
s Trachypithecus_pileatus.k141_2007326                        8428 1 +     20839 a
i Trachypithecus_pileatus.k141_2007326                   I 109 T 109
s Varecia_rubra.k141_590885                                  11502 1 +     50397 G
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11561 1 +     24756 G
i Varecia_variegata.k141_1128296                         C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          1173 1 +    224448 g
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
e Echinops_telfairi.JH980293.1                            48780689 3 + 111700974 I
e Otolemur_garnettii.GL873799.1                             696396 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         4233 0 +      8798 C
e Alouatta_discolor.k141_566626                              11239 3 +     28687 I
e Mus_pahari.LT608297.1                                   31355125 13 -  89631738 T
e Mus_spretus.CM004101.1                                  90752527 13 - 130317789 T
e Mus_musculus.chr8                                       87650466 13 - 129401213 T
e Mus_caroli.LT608237.1                                   84361468 13 - 120012414 T
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      14994 0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5478 0 +     86975 C
e Vulpes_lagopus.VulLag_flattened_line_30954                 10902 0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5371995 0 -   5488506 C
e Ursus_maritimus.KK499267.1                               4850549 0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   53362 63 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     9343 0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2155690 0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4293354 3 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     81307 0 +    610378 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   6516 8 +      8208 I
e Tapirus_terrestris.TapTer_scaffold_755                    387334 0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      118877 0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 72732 9 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                10910 0 +     41958 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6810879 0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629              18437 0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             30850 6 +     97271 I
e Sorex_araneus.JH798187.1                                13651056 93 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               3814 63 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11982 13 -     12148 T
e Scalopus_aquaticus.ScaAqu_scaffold_662                    153257 71 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                87918 0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570728 13 +  90668790 T
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20274421 0 -  38429054 C
e Pteropus_vampyrus.KN534172.1                                6949 0 -      8028 C
e Pteropus_alecto.KB030862.1                              22976896 0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         40349 0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            15188 0 -     21811 C
e Psammomys_obesus.NESX01036370.1                            10498 13 -     21651 T
e Prolemur_simus.MPIZ01000396.1                            2596839 0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                 13455 3 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             1869 0 +     22620 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Peromyscus_maniculatus.KI615324.1                       18194880 13 -  18517816 T
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12764 0 -     78924 C
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4721355 0 -   8748460 C
e Panthera_pardus.KV860321.1                                264476 0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  151267 0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       462454 0 -    559221 C
e Orycteropus_afer.OryAfe_flattened_line_144387               9955 3 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80254 13 +    102263 T
e Ondatra_zibethicus.OndZib_scaffold_46174                   25254 13 +     28053 T
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              506765 0 -   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9149506 0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20307615 0 +  31847680 C
e Nannospalax_galili.KL204047.1                            2034165 0 -   3037898 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189371 9 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_281845                          77 0 +      1835 C
e Myotis_lucifugus.GL429869.1                              3903925 0 -   4330536 C
e Myotis_davidii.KB100139.1                                1587833 0 -   6019432 C
e Myotis_brandtii.KE162005.1                                280571 0 -  10118263 C
e Mustela_putorius.JH418006.1                               301572 0 -  14710649 C
e Murina_feae.MurFea_scaffold_85699                           6928 0 +     14753 C
e Mungos_mungo.MunMun_flattened_line_23663                   35534 0 +     37127 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 141733 0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         6029 0 -      8324 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             34405 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1850724 0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11260586 13 -  27267610 T
e Micronycteris_hirsuta.MicHir_scaffold_52381                15766 0 -     19307 C
e Microgale_talazaci.MicTal_scaffold_6613                    22438 3 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182348 13 -  29670104 T
e Meriones_unguiculatus.MerUng_scaffold_7390                 32854 13 +    140813 T
e Mellivora_capensis.MelCap_flattened_line_69365             10159 0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                        10441 0 -    207569 C
e Manis_pentadactyla.KN006162.1                              50597 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18608 0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 90730 0 +     94391 C
e Lycaon_pictus.CM007581.1                                17955227 211 -  59628241 I
e Loxodonta_africana.GL010049.1                            4217433 3 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Leptonychotes_weddellii.KB714746.1                       3043161 0 +   3914936 C
e Lemur_catta.scaffold_24                                 15524159 0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    16479 0 -     42476 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276898 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  45128 0 +     55795 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                1000 3 +      7595 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               242434 0 +    327341 C
e Hapalemur_occidentalis.k141_907772                         13644 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                         13807 0 -     41752 C
e Hapalemur_griseus.k141_1511508                             13706 0 +     18253 C
e Hapalemur_gilberti.k141_488810                             12067 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           6918 0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Galagoides_demidoff.k141_1711393                            1699 0 +     41679 C
e Felis_nigripes.FelNig_flattened_line_20823                  9652 0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20195908 0 + 205367284 C
e Eulemur_sanfordi.k141_1122526                              13854 0 +    111500 C
e Eulemur_rufus.k141_1476633                                  4281 0 -     17153 C
e Eulemur_rubriventer.k141_774594                              228 0 +     13026 C
e Eulemur_mongoz.k141_232305                                 10737 0 +     97555 C
e Eulemur_macaco.k141_1562045                                12807 0 +     75513 C
e Eulemur_fulvus.k141_544389                                 14045 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                            12810 0 +     26330 C
e Eulemur_coronatus.k141_885031                              15606 0 -     25546 C
e Eulemur_collaris.k141_377015                                6582 0 -     16928 C
e Eulemur_albifrons.k141_342033                              13873 0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3328282 71 -   7059049 I
e Equus_przewalskii.KK951119.1                               33512 0 +    498745 C
e Equus_caballus.CM000403.2                               18531483 0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1283663 0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2145831 0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16329422 0 -  41312741 C
e Ellobius_talpinus.LOJH01081419.1                             538 13 +      8657 T
e Ellobius_lutescens.LOEQ01008920.1                          20407 13 -    110024 T
e Elephantulus_edwardii.JH947257.1                         1097777 3 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Eidolon_helvum.KE759718.1                                  10637 0 +     11740 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    6161 0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  673409 0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8630234 0 +  20541912 C
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            63648 8 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             28601 0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_37019               3028 88 -     19598 I
e Cricetulus_griseus.LT883664.1                           11667673 13 + 224834208 T
e Cricetomys_gambianus.CriGam_scaffold_18520                 50293 0 +     63868 C
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          14520 0 -     20389 C
e Condylura_cristata.JH655891.1                           17548142 67 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            173497 9 +    839153 I
e Choloepus_didactylus.ChoDid_scaffold_45914                 18421 8 +     19366 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870             641 8 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2585 0 -     25243 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     93132 0 +    217609 C
e Carollia_perspicillata.CarPer_scaffold_92756                5222 0 -     11696 C
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18500499 0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17958987 0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9034722 0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    185336 0 -    185531 C
e CanFam4.chr16                                           17799210 78 -  60362399 I
e Camelus_ferus.KB017975.1                                  403236 1 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2334953 0 -   7040546 C
e Camelus_bactrianus.KN276810.1                           10002495 0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  4868 0 +     43469 C
e Arctocebus_calabarensis.k141_2318572                       11569 0 +     14667 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      12706 8 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      185460 0 +    412891 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74597 0 -     89534 C
e Ailurus_fulgens.LNAC01001112.1                             79464 0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9510688 0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     70906 13 +     87051 T
e Acinonyx_jubatus.LLWD01001279.1                           827414 0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6909 2 +     62944 a-a
s Allenopithecus_nigroviridis.k141_3361533                   14716 2 -     52922 a-a
i Allenopithecus_nigroviridis.k141_3361533               T 123 C 0
s Allochrocebus_lhoesti.k141_4309873                         14652 2 -     28001 a-a
i Allochrocebus_lhoesti.k141_4309873                     T 101 C 0
s Allochrocebus_preussi.k141_1442296                          5148 2 -     18505 a-a
i Allochrocebus_preussi.k141_1442296                     T 103 C 0
s Allochrocebus_solatus.k141_166128                           6002 2 -     12518 a-a
i Allochrocebus_solatus.k141_166128                      T 101 C 0
s Alouatta_belzebul.k141_3560514                              7684 2 +     51355 a-a
i Alouatta_belzebul.k141_3560514                         I 3 T 199
s Alouatta_caraya.k141_1701091                                 793 2 -     36483 a-a
i Alouatta_caraya.k141_1701091                           I 3 T 194
s Alouatta_discolor.k141_566626                              11242 2 +     28687 a-a
i Alouatta_discolor.k141_566626                          I 3 C 0
s Alouatta_juara.k141_1509701                                25069 2 +     25266 a-a
i Alouatta_juara.k141_1509701                            I 3 T 197
s Alouatta_macconnelli.k141_918386                             790 2 -      9457 a-a
i Alouatta_macconnelli.k141_918386                       I 3 T 197
s Alouatta_nigerrima.k141_3472759                            18376 2 -     18578 a-a
i Alouatta_nigerrima.k141_3472759                        I 3 T 197
s Alouatta_palliata.k141_2135620                              3760 2 +     47717 a-a
i Alouatta_palliata.k141_2135620                         I 4 T 194
s Alouatta_puruensis.k141_362188                               472 2 +      5663 a-a
i Alouatta_puruensis.k141_362188                         I 3 T 201
s Alouatta_seniculus.k141_117119                             14924 2 +     50774 A-a
i Alouatta_seniculus.k141_117119                         I 3 C 0
s Aotus_azarae.k141_3104676                                  15711 2 -     33861 a-a
i Aotus_azarae.k141_3104676                              I 3 T 203
s Aotus_griseimembra.k141_2240599                            15747 2 -     34016 a-a
i Aotus_griseimembra.k141_2240599                        I 3 T 219
s Aotus_nancymaae.KZ198451.1                               4298135 2 -   5030052 a-a
i Aotus_nancymaae.KZ198451.1                             I 3 T 210
s Aotus_trivirgatus.k141_2152450                             15745 2 -     34685 a-a
i Aotus_trivirgatus.k141_2152450                         I 3 T 215
s Aotus_vociferans.k141_344750                               28869 2 -     47192 a-a
i Aotus_vociferans.k141_344750                           I 3 T 215
s Avahi_laniger.k141_765380                                  53781 2 -     92717 C-A
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54408 2 +     85213 C-A
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             5531 2 -     10423 a-a
i Callibella_humilis.k141_1278103                        I 3 T 268
s Callimico_goeldii.k141_1091182                             25000 2 +     31915 a-a
i Callimico_goeldii.k141_1091182                         I 3 T 266
s Callithrix_geoffroyi.k119_512088                            5229 2 +      5267 g-a
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590685 2 - 189096842 a-a
i Callithrix_jacchus.pat_scaffold_3                      I 3 T 242
s Callithrix_kuhlii.k119_1164682                             11974 2 -     12001 G-A
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1158 3 -     12242 ACA
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007247396.1                           201449 2 +    308752 a-a
i Carlito_syrichta.NW_007247396.1                        C 0 I 3
s Castor_canadensis.CasCan_scaffold_2074                    137175 3 +    179628 ATA
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                         10166 2 -     11392 a-a
i Cebuella_niveiventris.k141_1251222                     I 3 T 278
s Cebuella_pygmaea.k141_1309012                               6234 2 -      7577 a-a
i Cebuella_pygmaea.k141_1309012                          I 3 T 248
s Cebus_albifrons.Contig27                                25652452 2 +  26074798 a-a
i Cebus_albifrons.Contig27                               C 0 T 440
s Cebus_olivaceus.k141_1764483                                 423 2 +     28840 a-a
i Cebus_olivaceus.k141_1764483                           T 415 I 11
s Cebus_unicolor.k141_1837183                                  566 2 +     14051 a-a
i Cebus_unicolor.k141_1837183                            I 3 T 420
s Cephalopachus_bancanus.k141_1423433                         5454 2 +     31688 a-a
i Cephalopachus_bancanus.k141_1423433                    C 0 I 114
s Cercocebus_atys.KQ010504.1                               4475764 2 +   4669795 a-a
i Cercocebus_atys.KQ010504.1                             C 0 T 103
s Cercocebus_chrysogaster.k141_1540778                         268 2 +     17872 a-a
i Cercocebus_chrysogaster.k141_1540778                   C 0 I 8
s Cercocebus_lunulatus.k141_3342297                            925 2 -     14043 a-a
i Cercocebus_lunulatus.k141_3342297                      C 0 T 103
s Cercocebus_torquatus.k141_3057011                           8958 2 +     27781 a-a
i Cercocebus_torquatus.k141_3057011                      C 0 T 100
s Cercopithecus_ascanius.k141_1024104                         9023 2 -     20310 a-a
i Cercopithecus_ascanius.k141_1024104                    T 103 C 0
s Cercopithecus_cephus.k141_1078548                          12002 2 +     29689 a-a
i Cercopithecus_cephus.k141_1078548                      T 104 C 0
s Cercopithecus_diana.k141_1150327                            6756 2 -     20078 a-a
i Cercopithecus_diana.k141_1150327                       T 103 C 0
s Cercopithecus_hamlyni.k141_187466                          14679 2 -     27936 a-a
i Cercopithecus_hamlyni.k141_187466                      T 103 C 0
s Cercopithecus_lowei.k141_1854285                            3543 2 -     17152 a-a
i Cercopithecus_lowei.k141_1854285                       T 103 C 0
s Cercopithecus_albogularis.ctg5                                38817082 2 +  39242232 a-a
i Cercopithecus_albogularis.ctg5                               T 103 C 0
s Cercopithecus_mona.ctg39                                21222774 2 -  21565898 a-a
i Cercopithecus_mona.ctg39                               T 103 C 0
s Cercopithecus_neglectus.k141_2526306                       39892 2 -     53127 a-a
i Cercopithecus_neglectus.k141_2526306                   T 103 C 0
s Cercopithecus_nictitans.k141_1119862                         143 2 +     13442 a-a
i Cercopithecus_nictitans.k141_1119862                   T 103 C 0
s Cercopithecus_petaurista.k141_807961                       14692 2 -     27947 a-a
i Cercopithecus_petaurista.k141_807961                   T 103 C 0
s Cercopithecus_pogonias.k141_822820                         14668 2 +     17596 a-a
i Cercopithecus_pogonias.k141_822820                     T 103 C 0
s Cercopithecus_roloway.k141_2581234                           715 2 +     14005 a-a
i Cercopithecus_roloway.k141_2581234                     T 103 C 0
s Cheirogaleus_major.k141_333249                             21161 2 -     52598 A-A
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16526 2 +     57038 a-a
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1252906 2 +   2543920 a-a
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2206961                            432 2 -     15524 a-a
i Chiropotes_albinasus.k141_2206961                      I 3 T 242
s Chlorocebus_aethiops.ctg25                              18428652 2 -  18827391 a-a
i Chlorocebus_aethiops.ctg25                             T 103 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15089 2 -     50209 a-a
i Chlorocebus_pygerythrus.k141_1025673                   T 103 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422089 2 + 135778131 a-a
i Chlorocebus_sabaeus.CM001947.1                         T 103 C 0
s Colobus_angolensis.KN981557.1                            1910598 2 +   2368649 a-a
i Colobus_angolensis.KN981557.1                          T 106 C 0
s Colobus_guereza.LG01                                   199948965 2 + 200372422 A-A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37132 2 +     84244 a-a
i Colobus_polykomos.k141_906115                          T 106 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837180 2 +   1526836 A-A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35865 3 +     51376 ACA
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537377 2 -  12879189 A-A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36500 2 +     67921 A-A
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Erythrocebus_patas.Contig38                             21205259 2 -  21539334 a-a
i Erythrocebus_patas.Contig38                            T 101 C 0
s Eulemur_albifrons.k141_342033                              13873 2 -     14127 A-A
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6582 2 -     16928 A-A
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15606 2 -     25546 A-A
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12810 2 +     26330 a-a
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14045 2 +     23973 A-A
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12807 2 +     75513 a-a
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10737 2 +     97555 a-a
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              228 2 +     13026 a-a
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4281 2 -     17153 A-A
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13854 2 +    111500 A-A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Fukomys_damarensis.KN121974.1                             850534 2 +   3816255 a-a
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg2040                                     426709 2 -    453645 A-A
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4399 2 +     11339 a-a
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1281 2 -      9135 a-a
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            31467 2 +     49224 A-G
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              16046 2 -     32273 a-a
i Gorilla_beringei.k141_3596273                          T 118 C 0
s Gorilla_gorilla.LT578341.1                             186338301 2 + 186649187 a-a
i Gorilla_gorilla.LT578341.1                             C 0 T 117
s Graphiurus_murinus.GraMur_scaffold_10447                   32709 2 +     78134 A-G
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6918 2 -     19426 A-A
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12067 2 -     15286 A-A
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13706 2 +     18253 a-a
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13807 2 -     41752 A-A
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13644 2 -     16460 A-A
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20662323 2 +  22651954 a-a
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hoolock_leuconedys.ctg274                                    434858 2 +    630532 a-a
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83212 2 +    135385 A-A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7520991 2 -   7955117 a-g
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   22602 2 +     31101 a-a
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15524159 2 -  30322482 A-A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7810 2 +     64341 a-a
i Leontocebus_fuscicollis.k141_1820339                   I 3 T 285
s Leontocebus_illigeri.k141_1304848                            150 2 -     35062 a-a
i Leontocebus_illigeri.k141_1304848                      I 3 I 11
s Leontocebus_nigricollis.k141_4610752                        7838 2 +     35603 a-a
i Leontocebus_nigricollis.k141_4610752                   I 3 T 272
s Leontopithecus_chrysomelas.k141_1519602                    29254 2 +     38576 a-a
i Leontopithecus_chrysomelas.k141_1519602                I 3 T 227
s Leontopithecus_rosalia.k141_464620                         25724 2 +     66356 g-a
i Leontopithecus_rosalia.k141_464620                     T 227 C 0
s Lepilemur_ankaranensis.k141_596936                         11053 2 -     23766 A-A
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29114 2 +     45836 A-A
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1652 2 +     25010 A-A
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27050 2 +     54090 A-A
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6562 2 -     14121 a-g
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437309 2 +   1826925 a-a
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5958 2 +     11245 A-A
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004778 2 +   6120653 A-A
i Loris_tardigradus.ctg83                                C 0 C 0
s Macaca_arctoides.k141_2326796                               7022 2 +     40492 a-a
i Macaca_arctoides.k141_2326796                          T 103 C 0
s Macaca_assamensis.Contig5                               59676281 2 +  60120075 a-a
i Macaca_assamensis.Contig5                              T 103 C 0
s Macaca_cyclopis.k119_18836                                 12794 2 -     26193 a-a
i Macaca_cyclopis.k119_18836                             T 106 C 0
s Macaca_fascicularis.k141_814140                            80578 2 -    114318 a-a
i Macaca_fascicularis.k141_814140                        T 106 C 0
s Macaca_fuscata.k119_255327                                  6269 2 -     23192 a-a
i Macaca_fuscata.k119_255327                             T 102 C 0
s Macaca_leonina.k141_3550399                                15738 2 -     29190 a-a
i Macaca_leonina.k141_3550399                            T 106 C 0
s Macaca_maura.k141_2733130                                  24303 2 +     37952 a-a
i Macaca_maura.k141_2733130                              T 106 C 0
s Macaca_mulatta.NC_041758.1                             186839392 2 + 187317192 a-a
i Macaca_mulatta.NC_041758.1                             T 106 C 0
s Macaca_nemestrina.KQ007038.1                            25457955 2 -  25927173 a-a
i Macaca_nemestrina.KQ007038.1                           T 106 C 0
s Macaca_nigra.k141_1655396                                  80151 2 +     89720 a-a
i Macaca_nigra.k141_1655396                              T 106 C 0
s Macaca_radiata.k141_3680011                                 7152 2 +     20474 a-a
i Macaca_radiata.k141_3680011                            T 106 C 0
s Macaca_siberu.k141_635500                                   6952 2 -     14993 a-a
i Macaca_siberu.k141_635500                              T 106 C 0
s Macaca_silenus.Contig273                                  329818 2 -    668171 a-a
i Macaca_silenus.Contig273                               T 106 C 0
s Macaca_thibetana.k99_256239                                 5268 2 -     24072 a-a
i Macaca_thibetana.k99_256239                            T 103 C 0
s Macaca_tonkeana.k141_1498238                               25890 2 -     45290 a-a
i Macaca_tonkeana.k141_1498238                           T 106 C 0
s Mandrillus_leucophaeus.scaffold280                      23937584 2 -  24302211 a-a
i Mandrillus_leucophaeus.scaffold280                     C 0 T 103
s Mandrillus_sphinx.Contig270                               351708 2 +    752769 a-a
i Mandrillus_sphinx.Contig270                            C 0 T 99
s Marmota_marmota.CZRN01000018.1                          33103191 2 -  40650429 a-g
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mico_argentatus.k141_1239457                                6045 2 -      7380 a-a
i Mico_argentatus.k141_1239457                           I 3 T 242
s Mico_humeralifer.k141_2457295                                274 2 +      1079 a-a
i Mico_humeralifer.k141_2457295                          I 3 I 11
s Mico_schneideri.k141_1950671                                      6057 2 -      7356 a-a
i Mico_schneideri.k141_1950671                                 I 3 T 242
s Microcebus_murinus.CM007674.1                           18291584 2 -  93316391 a-a
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9206 2 -     28506 a-a
i Miopithecus_ogouensis.k141_534055                      T 87 C 0
s Mirza_zaza.k141_952172                                      9129 2 -     37649 A-A
i Mirza_zaza.k141_952172                                 C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71344 3 -     80779 ATA
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Nasalis_larvatus.k141_413338                               15185 2 +     21681 a-a
i Nasalis_larvatus.k141_413338                           T 110 C 0
s Nycticebus_bengalensis.LG01                            102586322 2 - 196305487 A-A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              246 2 +      2075 a-a
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761676 2 + 199412804 A-A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1363622 2 +   3988456 a-g
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  746954 3 +  11899542 aca
i Octodon_degus.JH651603.1                               C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147425 2 + 174332312 a-g
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Pan_paniscus.KQ411613.1                                    44135 2 +     80009 a-a
i Pan_paniscus.KQ411613.1                                T 117 C 0
s Pan_troglodytes.CM009242.2                             189143155 2 + 189151597 a-a
i Pan_troglodytes.CM009242.2                             C 0 I 8
s Papio_anubis.CM001495.2                                183443386 2 + 183742232 a-a
i Papio_anubis.CM001495.2                                C 0 T 155
s Papio_cynocephalus.k141_4307930                             7032 2 +     20448 a-a
i Papio_cynocephalus.k141_4307930                        C 0 T 103
s Papio_hamadryas.Contig39                                20563844 2 +  20919399 a-a
i Papio_hamadryas.Contig39                               C 0 T 107
s Papio_kindae.k141_1936966                                   5776 2 +     41871 a-a
i Papio_kindae.k141_1936966                              C 0 T 103
s Papio_papio.k141_802527                                     9069 2 +     27711 a-a
i Papio_papio.k141_802527                                C 0 T 111
s Papio_ursinus.k141_3428135                                  9138 2 +      9205 a-a
i Papio_ursinus.k141_3428135                             C 0 T 99
s Perodicticus_ibeanus.k141_855320                           10210 2 +     13100 A-A
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8616 2 +     25941 A-A
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28224 2 -     29689 T-A
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Piliocolobus_badius.k141_1234363                           43786 2 +     62158 a-a
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        38427 2 +     89929 a-a
i Piliocolobus_gordonorum.k141_381342                    T 106 C 0
s Piliocolobus_kirkii.k141_448987                            39843 2 +     51399 a-a
i Piliocolobus_kirkii.k141_448987                        T 106 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296081 2 -  14605196 a-a
i Piliocolobus_tephrosceles.PDMG02000141.1               T 106 C 0
s Pongo_abelii.CM009266.2                                189131181 2 + 189387572 a-a
i Pongo_abelii.CM009266.2                                T 109 C 0
s Pongo_pygmaeus.ctg66                                     9570789 2 +   9816681 a-a
i Pongo_pygmaeus.ctg66                                   T 108 C 0
s Presbytis_comata.k141_677006                               73365 2 -     81375 a-a
i Presbytis_comata.k141_677006                           T 106 C 0
s Presbytis_mitrata.k141_1087752                              5185 2 +     19060 a-a
i Presbytis_mitrata.k141_1087752                         T 106 C 0
s Prolemur_simus.MPIZ01000396.1                            2596839 2 -   4620579 a-a
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990825 2 +   2598838 a-a
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29137 2 +     38485 a-a
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1180 2 -     13098 A-A
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26658 2 +     35766 a-a
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4845 2 -     24134 A-A
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28670 2 -     67325 A-A
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4893 2 -      6182 A-A
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15194 2 -     91421 a-a
i Pygathrix_cinerea.k141_1153803                         T 110 C 0
s Pygathrix_nigripes_b.ctg100                                 7609314 2 +   7812017 a-a
i Pygathrix_nigripes_b.ctg100                               T 110 C 0
s Pygathrix_nigripes_a.k141_215492                             15166 2 -     72585 a-a
i Pygathrix_nigripes_a.k141_215492                         T 110 C 0
s Rhinopithecus_bieti.k119_217274                             6880 2 -     11128 a-a
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236233 2 - 195417433 a-a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7671885 2 +   7961872 a-a
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_8081                                   426 2 +     42994 a-a
i Saguinus_bicolor.k141_8081                             I 3 T 225
s Saguinus_imperator.k141_57697                                211 2 +      1030 a-a
i Saguinus_imperator.k141_57697                          I 3 I 11
s Saguinus_inustus.k141_3945547                                286 2 -      8737 a-a
i Saguinus_inustus.k141_3945547                          I 3 I 11
s Saguinus_labiatus.k141_285685                               8448 2 +      8564 g-a
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469777 2 + 209938924 a-a
i Saguinus_midas.LG03                                    I 3 T 479
s Saguinus_mystax.k141_374627                                 8412 2 -      9399 a-a
i Saguinus_mystax.k141_374627                            I 3 T 408
s Saimiri_boliviensis.NW_024100920.1                     119951154 2 - 121099817 a-a
i Saimiri_boliviensis.NW_024100920.1                     I 3 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23493 2 +     46362 a-a
i Saimiri_cassiquiarensis.k141_2188234                   I 3 C 0
s Saimiri_macrodon.k141_716185                               23588 2 +     45824 a-a
i Saimiri_macrodon.k141_716185                           I 3 C 0
s Saimiri_oerstedii.k141_1487881                             40267 2 -     64574 a-a
i Saimiri_oerstedii.k141_1487881                         I 3 C 0
s Saimiri_sciureus.k141_2278166                               3339 2 -     23631 a-a
i Saimiri_sciureus.k141_2278166                          I 3 C 0
s Saimiri_ustus.k141_1484609                                 23484 2 -     61129 a-a
i Saimiri_ustus.k141_1484609                             I 3 C 0
s Sapajus_apella.ctg103                                    5420684 2 -   5703754 g-a
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          56095 2 -     80660 a-a
i Sapajus_macrocephalus.k141_351809                      I 3 T 370
s Semnopithecus_entellus.k141_1672505                          168 2 -     12572 A-A
i Semnopithecus_entellus.k141_1672505                    C 0 I 8
s Semnopithecus_hypoleucos.k141_1615806                      26908 2 +     39453 a-a
i Semnopithecus_hypoleucos.k141_1615806                  T 110 C 0
s Semnopithecus_johnii.k141_670120                            7427 2 +     27826 a-a
i Semnopithecus_johnii.k141_670120                       T 109 C 0
s Semnopithecus_priam.k141_638794                             6948 2 -     19483 a-a
i Semnopithecus_priam.k141_638794                        T 110 C 0
s Semnopithecus_schistaceus.k141_1572284                       359 2 -     12762 A-A
i Semnopithecus_schistaceus.k141_1572284                 C 0 I 8
s Semnopithecus_vetulus.k141_910252                            220 2 +     13763 a-a
i Semnopithecus_vetulus.k141_910252                      C 0 I 8
s Spermophilus_dauricus.KZ294078.1                         1954046 2 -   3870691 a-g
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Tarsius_lariang.k141_2201908                               26456 2 +     70052 a-a
i Tarsius_lariang.k141_2201908                           C 0 I 105
s Tarsius_wallacei.k141_254427                                1358 2 -     16117 g-g
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428704 2 + 186847797 a-a
i Theropithecus_gelada.CM009954.1                        C 0 T 103
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105545 2 +    114563 T-G
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Trachypithecus_auratus.k141_722599                         10999 2 -     20410 a-a
i Trachypithecus_auratus.k141_722599                     T 110 C 0
s Trachypithecus_crepusculus.k141_582567                       113 2 -     12674 a-a
i Trachypithecus_crepusculus.k141_582567                 T 110 C 0
s Trachypithecus_cristatus.k141_580354                       11100 2 +     19930 a-a
i Trachypithecus_cristatus.k141_580354                   T 110 C 0
s Trachypithecus_francoisi.k141_1412647                       7621 2 -     19997 a-a
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            47651 2 -     60166 a-a
i Trachypithecus_geei.k141_277701                        T 109 C 0
s Trachypithecus_germaini.k141_912491                        15122 2 -     27529 a-a
i Trachypithecus_germaini.k141_912491                    T 110 C 0
s Trachypithecus_hatinhensis.k141_143409                     15066 2 -     18194 a-a
i Trachypithecus_hatinhensis.k141_143409                 T 110 C 0
s Trachypithecus_laotum.k141_907409                           8888 2 -     21137 a-a
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    7591 2 -     10723 a-a
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         6653 2 +      9834 a-a
i Trachypithecus_melamera.k141_434728                    T 110 C 0
s Trachypithecus_obscurus.k141_190785                        24966 2 +     32220 a-a
i Trachypithecus_obscurus.k141_190785                    T 110 C 0
s Trachypithecus_phayrei.ctg124                            5939068 2 +   6242583 a-a
i Trachypithecus_phayrei.ctg124                          T 110 C 0
s Trachypithecus_pileatus.k141_2007326                        8320 2 +     20839 a-a
i Trachypithecus_pileatus.k141_2007326                   T 109 C 0
s Varecia_rubra.k141_590885                                  11503 2 +     50397 A-A
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11562 2 +     24756 A-A
i Varecia_variegata.k141_1128296                         C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          1174 2 +    224448 a-g
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
e Echinops_telfairi.JH980293.1                            48780689 3 + 111700974 I
e Otolemur_garnettii.GL873799.1                             696396 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         4233 0 +      8798 C
e Mus_pahari.LT608297.1                                   31355125 13 -  89631738 T
e Mus_spretus.CM004101.1                                  90752527 13 - 130317789 T
e Mus_musculus.chr8                                       87650466 13 - 129401213 T
e Mus_caroli.LT608237.1                                   84361468 13 - 120012414 T
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      14994 0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5478 0 +     86975 C
e Vulpes_lagopus.VulLag_flattened_line_30954                 10902 0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5371995 0 -   5488506 C
e Ursus_maritimus.KK499267.1                               4850549 0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   53362 63 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     9343 0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2155690 0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4293354 3 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     81307 0 +    610378 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   6516 8 +      8208 I
e Tapirus_terrestris.TapTer_scaffold_755                    387334 0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      118877 0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 72732 9 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                10910 0 +     41958 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6810879 0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629              18437 0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             30850 6 +     97271 I
e Sorex_araneus.JH798187.1                                13651056 93 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               3814 63 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11982 13 -     12148 T
e Scalopus_aquaticus.ScaAqu_scaffold_662                    153257 71 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                87918 0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570728 13 +  90668790 T
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20274421 0 -  38429054 C
e Pteropus_vampyrus.KN534172.1                                6949 0 -      8028 C
e Pteropus_alecto.KB030862.1                              22976896 0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         40349 0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            15188 0 -     21811 C
e Psammomys_obesus.NESX01036370.1                            10498 13 -     21651 T
e Procavia_capensis.ProCapCap_scaffold_85530                 13455 3 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             1869 0 +     22620 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Peromyscus_maniculatus.KI615324.1                       18194880 13 -  18517816 T
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12764 0 -     78924 C
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4721355 0 -   8748460 C
e Panthera_pardus.KV860321.1                                264476 0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  151267 0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       462454 0 -    559221 C
e Orycteropus_afer.OryAfe_flattened_line_144387               9955 3 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80254 13 +    102263 T
e Ondatra_zibethicus.OndZib_scaffold_46174                   25254 13 +     28053 T
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              506765 0 -   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9149506 0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20307615 0 +  31847680 C
e Nannospalax_galili.KL204047.1                            2034165 0 -   3037898 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189371 9 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_281845                          77 0 +      1835 C
e Myotis_lucifugus.GL429869.1                              3903925 0 -   4330536 C
e Myotis_davidii.KB100139.1                                1587833 0 -   6019432 C
e Myotis_brandtii.KE162005.1                                280571 0 -  10118263 C
e Mustela_putorius.JH418006.1                               301572 0 -  14710649 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              5056 0 +     14296 C
e Murina_feae.MurFea_scaffold_85699                           6928 0 +     14753 C
e Mungos_mungo.MunMun_flattened_line_23663                   35534 0 +     37127 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 141733 0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         6029 0 -      8324 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             34405 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1850724 0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11260586 13 -  27267610 T
e Micronycteris_hirsuta.MicHir_scaffold_52381                15766 0 -     19307 C
e Microgale_talazaci.MicTal_scaffold_6613                    22438 3 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182348 13 -  29670104 T
e Meriones_unguiculatus.MerUng_scaffold_7390                 32854 13 +    140813 T
e Mellivora_capensis.MelCap_flattened_line_69365             10159 0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                        10441 0 -    207569 C
e Manis_pentadactyla.KN006162.1                              50597 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18608 0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 90730 0 +     94391 C
e Lycaon_pictus.CM007581.1                                17955227 211 -  59628241 I
e Loxodonta_africana.GL010049.1                            4217433 3 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Leptonychotes_weddellii.KB714746.1                       3043161 0 +   3914936 C
e Lasiurus_borealis.LasBor_scaffold_32767                    16479 0 -     42476 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276898 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  45128 0 +     55795 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                1000 3 +      7595 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               242434 0 +    327341 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Galagoides_demidoff.k141_1711393                            1699 0 +     41679 C
e Felis_nigripes.FelNig_flattened_line_20823                  9652 0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20195908 0 + 205367284 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3328282 71 -   7059049 I
e Equus_przewalskii.KK951119.1                               33512 0 +    498745 C
e Equus_caballus.CM000403.2                               18531483 0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1283663 0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2145831 0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16329422 0 -  41312741 C
e Ellobius_talpinus.LOJH01081419.1                             538 13 +      8657 T
e Ellobius_lutescens.LOEQ01008920.1                          20407 13 -    110024 T
e Elephantulus_edwardii.JH947257.1                         1097777 3 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Eidolon_helvum.KE759718.1                                  10637 0 +     11740 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    6161 0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  673409 0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8630234 0 +  20541912 C
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            63648 8 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             28601 0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_37019               3028 88 -     19598 I
e Cricetulus_griseus.LT883664.1                           11667673 13 + 224834208 T
e Cricetomys_gambianus.CriGam_scaffold_18520                 50293 0 +     63868 C
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          14520 0 -     20389 C
e Condylura_cristata.JH655891.1                           17548142 67 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            173497 9 +    839153 I
e Choloepus_didactylus.ChoDid_scaffold_45914                 18421 8 +     19366 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870             641 8 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2585 0 -     25243 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     93132 0 +    217609 C
e Carollia_perspicillata.CarPer_scaffold_92756                5222 0 -     11696 C
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18500499 0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17958987 0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9034722 0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    185336 0 -    185531 C
e CanFam4.chr16                                           17799210 78 -  60362399 I
e Camelus_ferus.KB017975.1                                  403236 1 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2334953 0 -   7040546 C
e Camelus_bactrianus.KN276810.1                           10002495 0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  4868 0 +     43469 C
e Arctocebus_calabarensis.k141_2318572                       11569 0 +     14667 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      12706 8 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      185460 0 +    412891 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74597 0 -     89534 C
e Ailurus_fulgens.LNAC01001112.1                             79464 0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9510688 0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     70906 13 +     87051 T
e Acinonyx_jubatus.LLWD01001279.1                           827414 0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6911 3 +     62944 g----gg
s Allenopithecus_nigroviridis.k141_3361533                   14718 3 -     52922 g----ga
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         14654 3 -     28001 g----ga
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          5150 3 -     18505 g----ga
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           6004 3 -     12518 g----ga
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              7487 3 +     51355 g----ga
i Alouatta_belzebul.k141_3560514                         T 199 C 0
s Alouatta_caraya.k141_1701091                                 601 3 -     36483 g----ga
i Alouatta_caraya.k141_1701091                           T 194 C 0
s Alouatta_discolor.k141_566626                              11244 3 +     28687 g----gg
i Alouatta_discolor.k141_566626                          C 0 I 8
s Alouatta_juara.k141_1509701                                24874 3 +     25266 g----ga
i Alouatta_juara.k141_1509701                            T 197 C 0
s Alouatta_macconnelli.k141_918386                             595 3 -      9457 g----ga
i Alouatta_macconnelli.k141_918386                       T 197 C 0
s Alouatta_nigerrima.k141_3472759                            18181 3 -     18578 g----ga
i Alouatta_nigerrima.k141_3472759                        T 197 C 0
s Alouatta_palliata.k141_2135620                              3568 3 +     47717 g----ga
i Alouatta_palliata.k141_2135620                         T 194 C 0
s Alouatta_puruensis.k141_362188                               273 3 +      5663 g----ga
i Alouatta_puruensis.k141_362188                         T 201 C 0
s Alouatta_seniculus.k141_117119                             14926 3 +     50774 g----gg
i Alouatta_seniculus.k141_117119                         C 0 I 8
s Aotus_azarae.k141_3104676                                  15510 3 -     33861 g----ga
i Aotus_azarae.k141_3104676                              T 203 C 0
s Aotus_griseimembra.k141_2240599                            15530 3 -     34016 g----ga
i Aotus_griseimembra.k141_2240599                        T 219 C 0
s Aotus_nancymaae.KZ198451.1                               4297927 3 -   5030052 g----ga
i Aotus_nancymaae.KZ198451.1                             T 210 C 0
s Aotus_trivirgatus.k141_2152450                             15532 3 -     34685 g----ga
i Aotus_trivirgatus.k141_2152450                         T 215 C 0
s Aotus_vociferans.k141_344750                               28656 3 -     47192 g----ga
i Aotus_vociferans.k141_344750                           T 215 C 0
s Arctocebus_calabarensis.k141_2318572                       11569 1 +     14667 -----G-
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Avahi_laniger.k141_765380                                  53783 3 -     92717 A----GA
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54410 3 +     85213 A----GA
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             5265 3 -     10423 g----gg
i Callibella_humilis.k141_1278103                        T 268 C 0
s Callimico_goeldii.k141_1091182                             24736 3 +     31915 g----ga
i Callimico_goeldii.k141_1091182                         T 266 C 0
s Callithrix_geoffroyi.k119_512088                            5231 3 +      5267 g----gg
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590445 3 - 189096842 g----gg
i Callithrix_jacchus.pat_scaffold_3                      T 242 C 0
s Callithrix_kuhlii.k119_1164682                             11976 3 -     12001 G----GG
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1161 3 -     12242 G----AA
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           156072 6 -    496798 aggcag-
i Carlito_syrichta.NW_007259797.1                        I 3 I 8
s Castor_canadensis.CasCan_scaffold_2074                    137178 3 +    179628 G----GA
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          9890 3 -     11392 g----gg
i Cebuella_niveiventris.k141_1251222                     T 278 C 0
s Cebuella_pygmaea.k141_1309012                               5988 3 -      7577 g----gg
i Cebuella_pygmaea.k141_1309012                          T 248 C 0
s Cebus_albifrons.Contig27                                25652014 3 +  26074798 g----ga
i Cebus_albifrons.Contig27                               T 440 I 440
s Cebus_olivaceus.k141_398305                                 1590 3 +      1777 g----ga
i Cebus_olivaceus.k141_398305                            I 7 C 0
s Cebus_unicolor.k141_544048                                 49927 3 -     74725 g----ga
i Cebus_unicolor.k141_544048                             I 7 C 0
s Cephalopachus_bancanus.k141_1423433                         5570 6 +     31688 aggcag-
i Cephalopachus_bancanus.k141_1423433                    I 114 T 117
s Cercocebus_atys.KQ010504.1                               4475663 3 +   4669795 g----ga
i Cercocebus_atys.KQ010504.1                             T 103 C 0
s Cercocebus_chrysogaster.k141_393940                        14208 3 -     19203 g----ga
i Cercocebus_chrysogaster.k141_393940                    I 2 C 0
s Cercocebus_lunulatus.k141_3342297                            824 3 -     14043 g----ga
i Cercocebus_lunulatus.k141_3342297                      T 103 C 0
s Cercocebus_torquatus.k141_3057011                           8860 3 +     27781 g----ga
i Cercocebus_torquatus.k141_3057011                      T 100 C 0
s Cercopithecus_ascanius.k141_1024104                         9025 3 -     20310 g----ga
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          12004 3 +     29689 g----ga
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            6758 3 -     20078 g----ga
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          14681 3 -     27936 g----ga
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            3545 3 -     17152 g----ga
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38817084 3 +  39242232 g----ga
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222776 3 -  21565898 g----ga
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       39894 3 -     53127 g----ga
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                         145 3 +     13442 g----ga
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14694 3 -     27947 g----ga
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         14670 3 +     17596 g----ga
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                           717 3 +     14005 g----ga
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheirogaleus_major.k141_333249                             21163 3 -     52598 A----GA
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16528 3 +     57038 a----ga
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1252908 3 +   2543920 g----ag
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2206961                            192 3 -     15524 g----ga
i Chiropotes_albinasus.k141_2206961                      T 242 I 242
s Chlorocebus_aethiops.ctg25                              18428654 3 -  18827391 g----ga
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15091 3 -     50209 g----ga
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422091 3 + 135778131 g----ga
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1910600 3 +   2368649 g----ga
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199948967 2 + 200372422 G----A-
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37134 3 +     84244 g----ga
i Colobus_polykomos.k141_906115                          C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837182 3 +   1526836 G----GA
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35868 3 +     51376 G----GG
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537379 3 -  12879189 A----GA
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36502 3 +     67921 G----GG
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Erythrocebus_patas.Contig38                             21205261 3 -  21539334 g----ga
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13875 3 -     14127 A----GA
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6584 3 -     16928 A----GA
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15608 3 -     25546 A----GA
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12812 3 +     26330 a----ga
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14047 3 +     23973 A----GA
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12809 3 +     75513 a----ga
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10739 3 +     97555 a----ga
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              230 3 +     13026 a----ga
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4283 3 -     17153 A----GA
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13856 3 +    111500 A----GA
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Fukomys_damarensis.KN121974.1                             850536 3 +   3816255 g----tg
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg2040                                     426711 2 -    453645 A----A-
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4401 2 +     11339 a----a-
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            1699 2 +     41679 A----G-
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1283 3 -      9135 g----ga
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            31469 3 +     49224 G----GA
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              16048 3 -     32273 g----ga
i Gorilla_beringei.k141_3596273                          C 0 I 4
s Gorilla_gorilla.LT578341.1                             186338186 3 + 186649187 g----ga
i Gorilla_gorilla.LT578341.1                             T 117 I 4
s Graphiurus_murinus.GraMur_scaffold_10447                   32711 3 +     78134 G----AA
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6920 3 -     19426 A----GA
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12069 3 -     15286 A----GA
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13708 3 +     18253 a----ga
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13809 3 -     41752 A----GA
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13646 3 -     16460 A----GA
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20662325 3 +  22651954 g----tg
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hoolock_leuconedys.ctg274                                    434860 3 +    630532 g----ga
i Hoolock_leuconedys.ctg274                                 C 0 I 4
s Hystrix_cristata.HysCri_scaffold_5660                      83214 3 +    135385 G----TG
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7520993 3 -   7955117 g----ga
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 7
s Indri_indri.k141_3655594                                   22604 3 +     31101 a----ga
i Indri_indri.k141_3655594                               C 0 C 0
s Lemur_catta.scaffold_24                                 15524161 3 -  30322482 A----TA
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7527 3 +     64341 g----gg
i Leontocebus_fuscicollis.k141_1820339                   T 285 C 0
s Leontocebus_illigeri.k141_3350179                           4850 3 +      4941 g----gg
i Leontocebus_illigeri.k141_3350179                      I 7 C 0
s Leontocebus_nigricollis.k141_4610752                        7568 3 +     35603 g----gg
i Leontocebus_nigricollis.k141_4610752                   T 272 C 0
s Leontopithecus_chrysomelas.k141_1519602                    29029 3 +     38576 g----ga
i Leontopithecus_chrysomelas.k141_1519602                T 227 C 0
s Leontopithecus_rosalia.k141_464620                         25726 3 +     66356 g----ga
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         11055 3 -     23766 A----GA
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29116 3 +     45836 A----GA
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1654 3 +     25010 A----GA
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27052 3 +     54090 A----GA
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6564 3 -     14121 g----ga
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437311 3 +   1826925 g----ac
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5960 2 +     11245 A----G-
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004780 2 +   6120653 A----G-
i Loris_tardigradus.ctg83                                C 0 C 0
s Macaca_arctoides.k141_2326796                               7024 3 +     40492 g----ga
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59676283 3 +  60120075 g----ga
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 12796 3 -     26193 g----ga
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            80580 3 -    114318 g----ga
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  6271 3 -     23192 g----ga
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                15740 3 -     29190 g----ga
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  24305 3 +     37952 g----ga
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186839394 3 + 187317192 g----ga
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25457957 3 -  25927173 g----ga
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  80153 3 +     89720 g----ga
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 7154 3 +     20474 g----ga
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   6954 3 -     14993 g----ga
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  329820 3 -    668171 g----ga
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 5270 3 -     24072 g----ga
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               25892 3 -     45290 g----ga
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23937483 3 -  24302211 g----ga
i Mandrillus_leucophaeus.scaffold280                     T 103 C 0
s Mandrillus_sphinx.Contig270                               351611 3 +    752769 g----ga
i Mandrillus_sphinx.Contig270                            T 99 C 0
s Marmota_marmota.CZRN01000018.1                          33103193 3 -  40650429 g----ga
i Marmota_marmota.CZRN01000018.1                         C 0 I 7
s Mico_argentatus.k141_1239457                                5805 3 -      7380 g----gg
i Mico_argentatus.k141_1239457                           T 242 C 0
s Mico_humeralifer.k141_1976199                               4878 3 +     18990 g----gg
i Mico_humeralifer.k141_1976199                          I 3 C 0
s Mico_schneideri.k141_1950671                                      5817 3 -      7356 g----gg
i Mico_schneideri.k141_1950671                                 T 242 C 0
s Microcebus_murinus.CM007674.1                           18291586 3 -  93316391 a----ga
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9208 3 -     28506 g----ga
i Miopithecus_ogouensis.k141_534055                      C 0 I 87
s Mirza_zaza.k141_952172                                      9131 3 -     37649 A----GA
i Mirza_zaza.k141_952172                                 C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71347 3 -     80779 G----GG
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Nasalis_larvatus.k141_413338                               15187 3 +     21681 g----aa
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nycticebus_bengalensis.LG01                            102586324 2 - 196305487 A----G-
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              248 2 +      2075 a----g-
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761678 2 + 199412804 A----G-
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1363624 3 +   3988456 g----ga
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  746957 3 +  11899542 g----gg
i Octodon_degus.JH651603.1                               C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147427 3 + 174332312 g----ga
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Pan_paniscus.KQ411613.1                                    44137 3 +     80009 g----ga
i Pan_paniscus.KQ411613.1                                C 0 I 4
s Pan_troglodytes.KZ622849.1                                 22339 3 +    110857 g----ga
i Pan_troglodytes.KZ622849.1                             I 6 I 4
s Papio_anubis.CM001495.2                                183443233 3 + 183742232 g----ga
i Papio_anubis.CM001495.2                                T 155 I 48
s Papio_cynocephalus.k141_4307930                             6931 3 +     20448 g----ga
i Papio_cynocephalus.k141_4307930                        T 103 C 0
s Papio_hamadryas.Contig39                                20563739 3 +  20919399 g----ga
i Papio_hamadryas.Contig39                               T 107 C 0
s Papio_kindae.k141_1936966                                   5675 3 +     41871 g----ga
i Papio_kindae.k141_1936966                              T 103 C 0
s Papio_papio.k141_802527                                     8960 3 +     27711 g----ga
i Papio_papio.k141_802527                                T 111 C 0
s Papio_ursinus.k141_3428135                                  9041 3 +      9205 g----ga
i Papio_ursinus.k141_3428135                             T 99 I 104
s Perodicticus_ibeanus.k141_855320                           10212 2 +     13100 A----G-
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8618 2 +     25941 A----G-
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28226 3 -     29689 G----TC
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Piliocolobus_badius.k141_1234363                           43788 3 +     62158 g----ac
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        38429 3 +     89929 g----ga
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            39845 3 +     51399 g----ga
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296083 3 -  14605196 g----ga
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189131183 3 + 189387572 g----ga
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570791 3 +   9816681 g----ga
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               73367 3 -     81375 g----ga
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              5187 3 +     19060 g----ga
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2596841 3 -   4620579 a----ga
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990827 3 +   2598838 a----ga
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29139 3 +     38485 a----ga
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1182 3 -     13098 A----GA
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26660 3 +     35766 a----ga
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4847 3 -     24134 A----GA
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28672 3 -     67325 A----GA
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4895 3 -      6182 A----GA
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15196 3 -     91421 g----ga
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7609316 3 +   7812017 g----ga
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             15168 3 -     72585 g----ga
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             6882 3 -     11128 g----ga
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236235 3 - 195417433 g----ga
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7671887 3 +   7961872 g----ga
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_8081                                   203 3 +     42994 g----aa
i Saguinus_bicolor.k141_8081                             T 225 C 0
s Saguinus_imperator.k141_2524406                             2162 3 +      2197 g----gg
i Saguinus_imperator.k141_2524406                        I 7 C 0
s Saguinus_inustus.k141_699149                               13581 3 +     13640 g----gg
i Saguinus_inustus.k141_699149                           I 7 C 0
s Saguinus_labiatus.k141_285685                               8450 3 +      8564 g----gg
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469300 3 + 209938924 g----gg
i Saguinus_midas.LG03                                    T 479 C 0
s Saguinus_mystax.k141_374627                                 8006 3 -      9399 g----gg
i Saguinus_mystax.k141_374627                            T 408 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951156 3 - 121099817 g----gg
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23495 3 +     46362 g----gg
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               23590 3 +     45824 g----gg
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             40269 3 -     64574 g----gg
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               3341 3 -     23631 g----gg
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 23486 3 -     61129 g----gg
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420686 3 -   5703754 g----ga
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          55727 3 -     80660 g----ga
i Sapajus_macrocephalus.k141_351809                      T 370 C 0
s Semnopithecus_entellus.k141_11662                          19705 3 -     19888 G----GA
i Semnopithecus_entellus.k141_11662                      I 3 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26910 3 +     39453 g----ga
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            7429 3 +     27826 g----ga
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             6950 3 -     19483 g----ga
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1584426                      7016 3 +      7198 g----ga
i Semnopithecus_schistaceus.k141_1584426                 I 15 C 0
s Semnopithecus_vetulus.k141_1200928                         15276 3 +     15514 g----ga
i Semnopithecus_vetulus.k141_1200928                     I 15 C 0
s Spermophilus_dauricus.KZ294078.1                         1954048 3 -   3870691 g----ga
i Spermophilus_dauricus.KZ294078.1                       C 0 I 7
s Tarsius_lariang.k141_2201908                               26563 6 +     70052 aggcag-
i Tarsius_lariang.k141_2201908                           I 105 T 108
s Tarsius_wallacei.k141_254427                                1360 6 -     16117 aggcag-
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428603 3 + 186847797 g----ga
i Theropithecus_gelada.CM009954.1                        T 103 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105547 3 +    114563 G----TA
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Trachypithecus_auratus.k141_722599                         11001 3 -     20410 g----ga
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                       115 3 -     12674 g----ga
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       11102 3 +     19930 g----ga
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       7623 3 -     19997 g----ac
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            47653 3 -     60166 g----ga
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        15124 3 -     27529 g----ga
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     15068 3 -     18194 g----ga
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           8890 3 -     21137 g----ac
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    7593 3 -     10723 g----ac
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         6655 3 +      9834 g----ga
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        24968 3 +     32220 g----ga
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5939070 3 +   6242583 g----ga
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        8322 3 +     20839 g----ga
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Varecia_rubra.k141_590885                                  11505 3 +     50397 G----AA
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11564 3 +     24756 G----AA
i Varecia_variegata.k141_1128296                         C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          1176 3 +    224448 g----ga
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 7
e Echinops_telfairi.JH980293.1                            48780689 3 + 111700974 I
e Otolemur_garnettii.GL873799.1                             696396 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         4233 0 +      8798 C
e Mus_pahari.LT608297.1                                   31355125 13 -  89631738 T
e Mus_spretus.CM004101.1                                  90752527 13 - 130317789 T
e Mus_musculus.chr8                                       87650466 13 - 129401213 T
e Mus_caroli.LT608237.1                                   84361468 13 - 120012414 T
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      14994 0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5478 0 +     86975 C
e Vulpes_lagopus.VulLag_flattened_line_30954                 10902 0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5371995 0 -   5488506 C
e Ursus_maritimus.KK499267.1                               4850549 0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   53362 63 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     9343 0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2155690 0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4293354 3 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     81307 0 +    610378 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   6516 8 +      8208 I
e Tapirus_terrestris.TapTer_scaffold_755                    387334 0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      118877 0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 72732 9 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                10910 0 +     41958 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6810879 0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629              18437 0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             30850 6 +     97271 I
e Sorex_araneus.JH798187.1                                13651056 93 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               3814 63 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11982 13 -     12148 T
e Scalopus_aquaticus.ScaAqu_scaffold_662                    153257 71 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                87918 0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570728 13 +  90668790 T
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20274421 0 -  38429054 C
e Pteropus_vampyrus.KN534172.1                                6949 0 -      8028 C
e Pteropus_alecto.KB030862.1                              22976896 0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         40349 0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            15188 0 -     21811 C
e Psammomys_obesus.NESX01036370.1                            10498 13 -     21651 T
e Procavia_capensis.ProCapCap_scaffold_85530                 13455 3 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             1869 0 +     22620 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Peromyscus_maniculatus.KI615324.1                       18194880 13 -  18517816 T
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12764 0 -     78924 C
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4721355 0 -   8748460 C
e Panthera_pardus.KV860321.1                                264476 0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  151267 0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       462454 0 -    559221 C
e Orycteropus_afer.OryAfe_flattened_line_144387               9955 3 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80254 13 +    102263 T
e Ondatra_zibethicus.OndZib_scaffold_46174                   25254 13 +     28053 T
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              506765 0 -   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9149506 0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20307615 0 +  31847680 C
e Nannospalax_galili.KL204047.1                            2034165 0 -   3037898 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189371 9 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_281845                          77 0 +      1835 C
e Myotis_lucifugus.GL429869.1                              3903925 0 -   4330536 C
e Myotis_davidii.KB100139.1                                1587833 0 -   6019432 C
e Myotis_brandtii.KE162005.1                                280571 0 -  10118263 C
e Mustela_putorius.JH418006.1                               301572 0 -  14710649 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              5056 0 +     14296 C
e Murina_feae.MurFea_scaffold_85699                           6928 0 +     14753 C
e Mungos_mungo.MunMun_flattened_line_23663                   35534 0 +     37127 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 141733 0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         6029 0 -      8324 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             34405 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1850724 0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11260586 13 -  27267610 T
e Micronycteris_hirsuta.MicHir_scaffold_52381                15766 0 -     19307 C
e Microgale_talazaci.MicTal_scaffold_6613                    22438 3 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182348 13 -  29670104 T
e Meriones_unguiculatus.MerUng_scaffold_7390                 32854 13 +    140813 T
e Mellivora_capensis.MelCap_flattened_line_69365             10159 0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                        10441 0 -    207569 C
e Manis_pentadactyla.KN006162.1                              50597 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18608 0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 90730 0 +     94391 C
e Lycaon_pictus.CM007581.1                                17955227 211 -  59628241 I
e Loxodonta_africana.GL010049.1                            4217433 3 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Leptonychotes_weddellii.KB714746.1                       3043161 0 +   3914936 C
e Lasiurus_borealis.LasBor_scaffold_32767                    16479 0 -     42476 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276898 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  45128 0 +     55795 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                1000 3 +      7595 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               242434 0 +    327341 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Felis_nigripes.FelNig_flattened_line_20823                  9652 0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20195908 0 + 205367284 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3328282 71 -   7059049 I
e Equus_przewalskii.KK951119.1                               33512 0 +    498745 C
e Equus_caballus.CM000403.2                               18531483 0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1283663 0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2145831 0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16329422 0 -  41312741 C
e Ellobius_talpinus.LOJH01081419.1                             538 13 +      8657 T
e Ellobius_lutescens.LOEQ01008920.1                          20407 13 -    110024 T
e Elephantulus_edwardii.JH947257.1                         1097777 3 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Eidolon_helvum.KE759718.1                                  10637 0 +     11740 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    6161 0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  673409 0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8630234 0 +  20541912 C
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            63648 8 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             28601 0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_37019               3028 88 -     19598 I
e Cricetulus_griseus.LT883664.1                           11667673 13 + 224834208 T
e Cricetomys_gambianus.CriGam_scaffold_18520                 50293 0 +     63868 C
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          14520 0 -     20389 C
e Condylura_cristata.JH655891.1                           17548142 67 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            173497 9 +    839153 I
e Choloepus_didactylus.ChoDid_scaffold_45914                 18421 8 +     19366 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870             641 8 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2585 0 -     25243 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     93132 0 +    217609 C
e Carollia_perspicillata.CarPer_scaffold_92756                5222 0 -     11696 C
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18500499 0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17958987 0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9034722 0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    185336 0 -    185531 C
e CanFam4.chr16                                           17799210 78 -  60362399 I
e Camelus_ferus.KB017975.1                                  403236 1 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2334953 0 -   7040546 C
e Camelus_bactrianus.KN276810.1                           10002495 0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  4868 0 +     43469 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      12706 8 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      185460 0 +    412891 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74597 0 -     89534 C
e Ailurus_fulgens.LNAC01001112.1                             79464 0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9510688 0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     70906 13 +     87051 T
e Acinonyx_jubatus.LLWD01001279.1                           827414 0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6914  5 +     62944 ag--------a---------aa
s Allactaga_bullata.AllBul_scaffold_9566                     74597  5 -     89534 AG--------A---------GA
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14721  5 -     52922 ag--------g---------aa
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         14657  5 -     28001 ag--------a---------aa
i Allochrocebus_lhoesti.k141_4309873                     C 0 I 101
s Allochrocebus_preussi.k141_1442296                          5153  5 -     18505 ag--------a---------aa
i Allochrocebus_preussi.k141_1442296                     C 0 I 103
s Allochrocebus_solatus.k141_166128                           6007  5 -     12518 ag--------a---------aa
i Allochrocebus_solatus.k141_166128                      C 0 I 101
s Alouatta_belzebul.k141_3560514                              7490  5 +     51355 ag--------g---------aa
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                 604  5 -     36483 ag--------g---------ga
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              11255  5 +     28687 ag--------g---------ga
i Alouatta_discolor.k141_566626                          I 8 C 0
s Alouatta_juara.k141_1509701                                24877  5 +     25266 ag--------g---------ga
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_918386                             598  5 -      9457 ag--------g---------ga
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_3472759                            18184  5 -     18578 ag--------g---------ga
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              3571  5 +     47717 ag--------g---------aa
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                               276  5 +      5663 ag--------g---------ga
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             14937  5 +     50774 ag--------g---------ga
i Alouatta_seniculus.k141_117119                         I 8 C 0
s Aotus_azarae.k141_3104676                                  15513  5 -     33861 ag--------g---------aa
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            15533  5 -     34016 ag--------g---------aa
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297930  5 -   5030052 ag--------g---------aa
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             15535  5 -     34685 ag--------g---------aa
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28659  5 -     47192 ag--------g---------aa
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      12714  5 +     20879 AG--------A---------GA
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 8 C 0
s Avahi_laniger.k141_765380                                  53786  5 -     92717 AG--------A---------AA
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54413  5 +     85213 AG--------A---------AA
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             5268  5 -     10423 ag--------g---------aa
i Callibella_humilis.k141_1278103                        C 0 I 4
s Callimico_goeldii.k141_1091182                             24739  5 +     31915 ag--------g---------aa
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            5234  5 +      5267 ag--------g---------aa
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590448  5 - 189096842 ag--------g---------aa
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             11979  5 -     12001 AG--------G---------AA
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1164  2 -     12242 AG--------------------
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 2
s Carlito_syrichta.NW_007247396.1                           201454  5 +    308752 ag--------g---------aa
i Carlito_syrichta.NW_007247396.1                        I 3 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137181  5 +    179628 AC--------G---------GC
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          9893  5 -     11392 ag--------g---------aa
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               5991  5 -      7577 ag--------g---------aa
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25652457  5 +  26074798 ag--------g---------aa
i Cebus_albifrons.Contig27                               I 440 C 0
s Cebus_olivaceus.k141_398305                                 1593  5 +      1777 ag--------c---------aa
i Cebus_olivaceus.k141_398305                            C 0 C 0
s Cebus_unicolor.k141_544048                                 49930  5 -     74725 ag--------c---------aa
i Cebus_unicolor.k141_544048                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         5459  5 +     31688 ag--------g---------aa
i Cephalopachus_bancanus.k141_1423433                    T 117 C 0
s Cercocebus_atys.KQ010504.1                               4475666  5 +   4669795 ag--------g---------aa
i Cercocebus_atys.KQ010504.1                             C 0 I 103
s Cercocebus_chrysogaster.k141_393940                        14211  5 -     19203 ag--------g---------aa
i Cercocebus_chrysogaster.k141_393940                    C 0 I 3
s Cercocebus_lunulatus.k141_3342297                            827  5 -     14043 ag--------g---------aa
i Cercocebus_lunulatus.k141_3342297                      C 0 I 103
s Cercocebus_torquatus.k141_3057011                           8863  5 +     27781 ag--------g---------aa
i Cercocebus_torquatus.k141_3057011                      C 0 I 100
s Cercopithecus_ascanius.k141_1024104                         9028  5 -     20310 ag--------g---------aa
i Cercopithecus_ascanius.k141_1024104                    C 0 I 103
s Cercopithecus_cephus.k141_1078548                          12007  5 +     29689 ag--------g---------aa
i Cercopithecus_cephus.k141_1078548                      C 0 I 104
s Cercopithecus_diana.k141_1150327                            6761  5 -     20078 ag--------g---------aa
i Cercopithecus_diana.k141_1150327                       C 0 I 103
s Cercopithecus_hamlyni.k141_187466                          14684  5 -     27936 aa--------g---------aa
i Cercopithecus_hamlyni.k141_187466                      C 0 I 97
s Cercopithecus_lowei.k141_1854285                            3548  5 -     17152 ag--------g---------aa
i Cercopithecus_lowei.k141_1854285                       C 0 I 103
s Cercopithecus_albogularis.ctg5                                38817087  5 +  39242232 ag--------g---------aa
i Cercopithecus_albogularis.ctg5                               C 0 I 103
s Cercopithecus_mona.ctg39                                21222779  5 -  21565898 ag--------g---------aa
i Cercopithecus_mona.ctg39                               C 0 I 103
s Cercopithecus_neglectus.k141_2526306                       39897  5 -     53127 ag--------g---------aa
i Cercopithecus_neglectus.k141_2526306                   C 0 I 103
s Cercopithecus_nictitans.k141_1119862                         148  5 +     13442 ag--------g---------aa
i Cercopithecus_nictitans.k141_1119862                   C 0 I 103
s Cercopithecus_petaurista.k141_807961                       14697  5 -     27947 ag--------g---------aa
i Cercopithecus_petaurista.k141_807961                   C 0 I 103
s Cercopithecus_pogonias.k141_822820                         14673  5 +     17596 ag--------g---------aa
i Cercopithecus_pogonias.k141_822820                     C 0 I 103
s Cercopithecus_roloway.k141_2581234                           720  5 +     14005 ag--------g---------aa
i Cercopithecus_roloway.k141_2581234                     C 0 I 103
s Cheirogaleus_major.k141_333249                             21166  5 -     52598 AG--------A---------AA
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16531  5 +     57038 ag--------a---------aa
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1252911  5 +   2543920 ag--------g---------ga
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2206961                            437 13 -     15524 agagaggaagg---------ga
i Chiropotes_albinasus.k141_2206961                      I 242 T 250
s Chlorocebus_aethiops.ctg25                              18428657  5 -  18827391 ag--------a---------aa
i Chlorocebus_aethiops.ctg25                             C 0 I 103
s Chlorocebus_pygerythrus.k141_1025673                       15094  5 -     50209 ag--------a---------aa
i Chlorocebus_pygerythrus.k141_1025673                   C 0 I 103
s Chlorocebus_sabaeus.CM001947.1                         135422094  5 + 135778131 ag--------a---------aa
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 103
s Colobus_angolensis.KN981557.1                            1910603  5 +   2368649 aa--------g---------aa
i Colobus_angolensis.KN981557.1                          C 0 I 106
s Colobus_polykomos.k141_906115                              37137  5 +     84244 aa--------g---------aa
i Colobus_polykomos.k141_906115                          C 0 I 106
s Cricetomys_gambianus.CriGam_scaffold_18520                 50293  5 +     63868 aa--------a---------CA
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837185  5 +   1526836 AG--------A---------GA
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35871  5 +     51376 GG--------G---------TA
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537382  5 -  12879189 AG--------A---------AA
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36505  5 +     67921 AG--------A---------GA
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Erythrocebus_patas.Contig38                             21205264  5 -  21539334 ag--------g---------aa
i Erythrocebus_patas.Contig38                            C 0 I 101
s Eulemur_albifrons.k141_342033                              13878  5 -     14127 AG--------A---------AA
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6587 10 -     16928 AG---AAAGGA---------AA
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15611  5 -     25546 AG--------A---------AA
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12815  5 +     26330 ag--------a---------aa
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14050 10 +     23973 AG---AAAGGA---------AA
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12812  5 +     75513 ag--------a---------aa
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10742  5 +     97555 ag--------a---------aa
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              233  5 +     13026 ag--------a---------aa
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4286 10 -     17153 AG---AAAGGA---------AA
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13859  5 +    111500 AG--------A---------AA
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Fukomys_damarensis.KN121974.1                             850539  5 +   3816255 ag--------a---------ga
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1286  5 -      9135 ag--------a---------aa
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              16055  5 -     32273 ag--------g---------aa
i Gorilla_beringei.k141_3596273                          I 4 I 114
s Gorilla_gorilla.LT578341.1                             186338193  5 + 186649187 ag--------g---------aa
i Gorilla_gorilla.LT578341.1                             I 4 I 113
s Hapalemur_alaotrensis.k141_170648                           6923  5 -     19426 AG--------A---------AA
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12072  5 -     15286 AG--------A---------AA
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13711  5 +     18253 ag--------a---------aa
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13812  5 -     41752 AG--------A---------AA
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13649  5 -     16460 AG--------A---------AA
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20662328  5 +  22651954 ag--------C---------AA
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hoolock_leuconedys.ctg274                                    434867  5 +    630532 ag--------g---------aa
i Hoolock_leuconedys.ctg274                                 I 4 I 105
s Hystrix_cristata.HysCri_scaffold_5660                      83217  5 +    135385 AG--------G---------GA
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Indri_indri.k141_3655594                                   22607  5 +     31101 ag--------a---------aa
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8276898  5 -   9596543 AG--------A---------GA
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lemur_catta.scaffold_24                                 15524164  5 -  30322482 AG--------A---------AA
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7530  5 +     64341 ag--------g---------aa
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           4853  5 +      4941 ag--------g---------aa
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        7571  5 +     35603 ag--------g---------aa
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    29032  5 +     38576 ag--------g---------aa
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         25729  5 +     66356 ag--------g---------aa
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         11058  5 -     23766 AG--------A---------AA
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29119  5 +     45836 AG--------A---------AA
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1657  5 +     25010 AG--------A---------AA
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27055  5 +     54090 AG--------A---------AA
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6567  5 -     14121 gg--------g---------aa
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437314  5 +   1826925 ag--------g---------ga
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                               7027  5 +     40492 ag--------g---------aa
i Macaca_arctoides.k141_2326796                          C 0 I 103
s Macaca_assamensis.Contig5                               59676286  5 +  60120075 ag--------g---------aa
i Macaca_assamensis.Contig5                              C 0 I 103
s Macaca_cyclopis.k119_18836                                 12799  5 -     26193 ag--------g---------aa
i Macaca_cyclopis.k119_18836                             C 0 I 106
s Macaca_fascicularis.k141_814140                            80583  5 -    114318 ag--------g---------aa
i Macaca_fascicularis.k141_814140                        C 0 I 106
s Macaca_fuscata.k119_255327                                  6274  5 -     23192 ag--------g---------aa
i Macaca_fuscata.k119_255327                             C 0 I 102
s Macaca_leonina.k141_3550399                                15743  5 -     29190 ag--------g---------aa
i Macaca_leonina.k141_3550399                            C 0 I 106
s Macaca_maura.k141_2733130                                  24308  5 +     37952 ag--------g---------aa
i Macaca_maura.k141_2733130                              C 0 I 106
s Macaca_mulatta.NC_041758.1                             186839397  5 + 187317192 ag--------g---------aa
i Macaca_mulatta.NC_041758.1                             C 0 I 106
s Macaca_nemestrina.KQ007038.1                            25457960  5 -  25927173 ag--------g---------aa
i Macaca_nemestrina.KQ007038.1                           C 0 I 106
s Macaca_nigra.k141_1655396                                  80156  5 +     89720 ag--------g---------aa
i Macaca_nigra.k141_1655396                              C 0 I 106
s Macaca_radiata.k141_3680011                                 7157  5 +     20474 ag--------g---------aa
i Macaca_radiata.k141_3680011                            C 0 I 106
s Macaca_siberu.k141_635500                                   6957  5 -     14993 ag--------g---------aa
i Macaca_siberu.k141_635500                              C 0 I 106
s Macaca_silenus.Contig273                                  329823  5 -    668171 ag--------g---------aa
i Macaca_silenus.Contig273                               C 0 I 106
s Macaca_thibetana.k99_256239                                 5273  5 -     24072 ag--------g---------aa
i Macaca_thibetana.k99_256239                            C 0 I 103
s Macaca_tonkeana.k141_1498238                               25895  5 -     45290 ag--------g---------aa
i Macaca_tonkeana.k141_1498238                           C 0 I 106
s Mandrillus_leucophaeus.scaffold280                      23937486  5 -  24302211 ag--------g---------aa
i Mandrillus_leucophaeus.scaffold280                     C 0 I 103
s Mandrillus_sphinx.Contig270                               351614  5 +    752769 ag--------g---------aa
i Mandrillus_sphinx.Contig270                            C 0 I 99
s Mico_argentatus.k141_1239457                                5808  5 -      7380 ag--------g---------aa
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               4881  5 +     18990 ag--------g---------aa
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      5820  5 -      7356 ag--------g---------aa
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18291589  5 -  93316391 ag--------a---------aa
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9298  5 -     28506 ag--------g---------ga
i Miopithecus_ogouensis.k141_534055                      I 87 C 0
s Mirza_zaza.k141_952172                                      9134  5 -     37649 AG--------A---------AA
i Mirza_zaza.k141_952172                                 C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71350  5 -     80779 AG--------G---------TC
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Nannospalax_galili.KL204047.1                            2034165  8 -   3037898 GA-----GAAG---------GG
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               15190  5 +     21681 gg--------g---------aa
i Nasalis_larvatus.k141_413338                           C 0 I 110
s Ochotona_princeps.JH802162.1                             1363627  5 +   3988456 ag--------g---------ga
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  746960  5 +  11899542 aG--------G---------TG
i Octodon_degus.JH651603.1                               C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147430  5 + 174332312 gg--------g---------aa
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Pan_paniscus.KQ411613.1                                    44144  5 +     80009 ag--------g---------aa
i Pan_paniscus.KQ411613.1                                I 4 I 113
s Pan_troglodytes.KZ622849.1                                 22346  5 +    110857 ag--------g---------aa
i Pan_troglodytes.KZ622849.1                             I 4 I 14
s Papio_anubis.CM001495.2                                183443284  5 + 183742232 ag--------g---------aa
i Papio_anubis.CM001495.2                                I 48 I 107
s Papio_cynocephalus.k141_4307930                             6934  5 +     20448 ag--------g---------aa
i Papio_cynocephalus.k141_4307930                        C 0 I 103
s Papio_hamadryas.Contig39                                20563742  5 +  20919399 ag--------g---------aa
i Papio_hamadryas.Contig39                               C 0 I 107
s Papio_kindae.k141_1936966                                   5678  5 +     41871 ag--------g---------aa
i Papio_kindae.k141_1936966                              C 0 I 103
s Papio_papio.k141_802527                                     8963  5 +     27711 ag--------g---------aa
i Papio_papio.k141_802527                                C 0 I 111
s Papio_ursinus.k141_5274964                                    71  5 -     11374 CG--------G---------CA
i Papio_ursinus.k141_5274964                             n 104 I 49
s Petromus_typicus.PetTyp_scaffold_42190                     28229  5 -     29689 GG--------G---------GA
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Piliocolobus_badius.k141_1234363                           43791  5 +     62158 ag--------g---------ga
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        38432  5 +     89929 ag--------g---------aa
i Piliocolobus_gordonorum.k141_381342                    C 0 I 106
s Piliocolobus_kirkii.k141_448987                            39848  5 +     51399 ag--------g---------aa
i Piliocolobus_kirkii.k141_448987                        C 0 I 106
s Piliocolobus_tephrosceles.PDMG02000141.1                14296086  5 -  14605196 ag--------g---------aa
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 106
s Pongo_abelii.CM009266.2                                189131186  5 + 189387572 ag--------g---------aa
i Pongo_abelii.CM009266.2                                C 0 I 109
s Pongo_pygmaeus.ctg66                                     9570794  5 +   9816681 ag--------g---------aa
i Pongo_pygmaeus.ctg66                                   C 0 I 108
s Presbytis_comata.k141_677006                               73370  5 -     81375 ag--------g---------aa
i Presbytis_comata.k141_677006                           C 0 I 106
s Presbytis_mitrata.k141_1087752                              5190  5 +     19060 ag--------g---------aa
i Presbytis_mitrata.k141_1087752                         C 0 I 106
s Prolemur_simus.MPIZ01000396.1                            2596844  5 -   4620579 ag--------a---------aa
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990830  5 +   2598838 ag--------a---------aa
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29142  5 +     38485 ag--------a---------aa
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1185  5 -     13098 AG--------A---------AA
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26663  5 +     35766 ag--------a---------aa
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4850  5 -     24134 AG--------A---------AA
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28675  5 -     67325 AG--------A---------AA
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4898  5 -      6182 AG--------A---------AA
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15199  5 -     91421 ag--------g---------aa
i Pygathrix_cinerea.k141_1153803                         C 0 I 110
s Pygathrix_nigripes_b.ctg100                                 7609319  5 +   7812017 ag--------g---------aa
i Pygathrix_nigripes_b.ctg100                               C 0 I 110
s Pygathrix_nigripes_a.k141_215492                             15171  5 -     72585 ag--------g---------aa
i Pygathrix_nigripes_a.k141_215492                         C 0 I 110
s Rhinopithecus_bieti.k119_217274                             6885  5 -     11128 ag--------g---------aa
i Rhinopithecus_bieti.k119_217274                        C 0 I 107
s Rhinopithecus_roxellana.NC_044550.1                     91236238  5 - 195417433 ag--------g---------aa
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 103
s Rhinopithecus_strykeri.ctg102                            7671890  5 +   7961872 ag--------g---------aa
i Rhinopithecus_strykeri.ctg102                          C 0 I 107
s Saguinus_bicolor.k141_8081                                   206  5 +     42994 ag--------g---------aa
i Saguinus_bicolor.k141_8081                             C 0 I 228
s Saguinus_imperator.k141_2524406                             2165 14 +      2197 ag--------gaagttaagtaa
i Saguinus_imperator.k141_2524406                        C 0 C 0
s Saguinus_inustus.k141_699149                               13584 14 +     13640 ag--------gaagttaagtaa
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               8453 14 +      8564 ag--------gaagttaagtaa
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469303  5 + 209938924 ag--------g---------aa
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 8009 14 -      9399 ag--------gaagttaagtaa
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951159  5 - 121099817 aa--------a---------ga
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23498  5 +     46362 aa--------a---------ga
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               23593  5 +     45824 aa--------a---------ga
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             40272  5 -     64574 aa--------a---------ga
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               3344  5 -     23631 aa--------a---------ga
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 23489  5 -     61129 aa--------a---------ga
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420689  5 -   5703754 ag--------g---------aa
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          55730  5 -     80660 ag--------g---------aa
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Semnopithecus_entellus.k141_11662                          19708  5 -     19888 AG--------G---------AA
i Semnopithecus_entellus.k141_11662                      C 0 I 7
s Semnopithecus_hypoleucos.k141_1615806                      26913  5 +     39453 ag--------g---------aa
i Semnopithecus_hypoleucos.k141_1615806                  C 0 I 110
s Semnopithecus_johnii.k141_670120                            7432  5 +     27826 ag--------g---------aa
i Semnopithecus_johnii.k141_670120                       C 0 I 109
s Semnopithecus_priam.k141_638794                             6953  5 -     19483 ag--------g---------aa
i Semnopithecus_priam.k141_638794                        C 0 I 110
s Semnopithecus_schistaceus.k141_1584426                      7019  5 +      7198 ag--------g---------aa
i Semnopithecus_schistaceus.k141_1584426                 C 0 I 12
s Semnopithecus_vetulus.k141_1200928                         15279  5 +     15514 ag--------g---------aa
i Semnopithecus_vetulus.k141_1200928                     C 0 I 12
s Tarsius_lariang.k141_2201908                               26461  5 +     70052 ag--------g---------aa
i Tarsius_lariang.k141_2201908                           T 108 C 0
s Tarsius_wallacei.k141_254427                                1366  5 -     16117 aa--------a---------ga
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428606  5 + 186847797 ag--------g---------aa
i Theropithecus_gelada.CM009954.1                        C 0 I 103
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105550  5 +    114563 AG--------T---------GA
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Trachypithecus_auratus.k141_722599                         11004  5 -     20410 ag--------g---------aa
i Trachypithecus_auratus.k141_722599                     C 0 I 110
s Trachypithecus_crepusculus.k141_582567                       118  5 -     12674 ag--------g---------aa
i Trachypithecus_crepusculus.k141_582567                 C 0 I 110
s Trachypithecus_cristatus.k141_580354                       11105  5 +     19930 ag--------g---------aa
i Trachypithecus_cristatus.k141_580354                   C 0 I 110
s Trachypithecus_francoisi.k141_1412647                       7626  5 -     19997 ag--------g---------ga
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            47656  5 -     60166 ag--------g---------aa
i Trachypithecus_geei.k141_277701                        C 0 I 109
s Trachypithecus_germaini.k141_912491                        15127  5 -     27529 ag--------g---------aa
i Trachypithecus_germaini.k141_912491                    C 0 I 110
s Trachypithecus_hatinhensis.k141_143409                     15071  5 -     18194 ag--------g---------aa
i Trachypithecus_hatinhensis.k141_143409                 C 0 I 110
s Trachypithecus_laotum.k141_907409                           8893  5 -     21137 ag--------g---------ga
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    7596  5 -     10723 ag--------g---------ga
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         6658  5 +      9834 ag--------g---------aa
i Trachypithecus_melamera.k141_434728                    C 0 I 110
s Trachypithecus_obscurus.k141_190785                        24971  5 +     32220 ag--------g---------aa
i Trachypithecus_obscurus.k141_190785                    C 0 I 110
s Trachypithecus_phayrei.ctg124                            5939073  5 +   6242583 ag--------g---------aa
i Trachypithecus_phayrei.ctg124                          C 0 I 110
s Trachypithecus_pileatus.k141_2007326                        8325  5 +     20839 ag--------g---------aa
i Trachypithecus_pileatus.k141_2007326                   C 0 I 109
s Varecia_rubra.k141_590885                                  11508  6 +     50397 AG-------AA---------AA
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11567  6 +     24756 AG-------AA---------AA
i Varecia_variegata.k141_1128296                         C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      14994  5 +     63895 AG--------A---------GA
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Echinops_telfairi.JH980293.1                            48780689  3 + 111700974 I
e Otolemur_garnettii.GL873799.1                             696396  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         4233  0 +      8798 C
e Galago_senegalensis.k141_631886                             4403  0 +     11339 C
e Galago_moholi.ctg2040                                     426713  0 -    453645 C
e Mus_pahari.LT608297.1                                   31355125 13 -  89631738 T
e Mus_spretus.CM004101.1                                  90752527 13 - 130317789 T
e Mus_musculus.chr8                                       87650466 13 - 129401213 T
e Mus_caroli.LT608237.1                                   84361468 13 - 120012414 T
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Loris_tardigradus.ctg83                                  1004782  0 +   6120653 C
e Loris_lydekkerianus.k141_2539221                            5962  0 +     11245 C
e Perodicticus_potto.k141_1092580                             8620  0 +     25941 C
e Perodicticus_ibeanus.k141_855320                           10214  0 +     13100 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5478  0 +     86975 C
e Xerus_inauris.XerIna_scaffold_2302                          1179  7 +    224448 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 10902  0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5371995  0 -   5488506 C
e Ursus_maritimus.KK499267.1                               4850549  0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   53362 63 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     9343  0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2155690  0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4293354  3 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     81307  0 +    610378 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   6516  8 +      8208 I
e Tapirus_terrestris.TapTer_scaffold_755                    387334  0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      118877  0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 72732  9 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                10910  0 +     41958 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6810879  0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629              18437  0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             30850  6 +     97271 I
e Spermophilus_dauricus.KZ294078.1                         1954051  7 -   3870691 I
e Sorex_araneus.JH798187.1                                13651056 93 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               3814 63 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11982 13 -     12148 T
e Scalopus_aquaticus.ScaAqu_scaffold_662                    153257 71 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                87918  0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570728 13 +  90668790 T
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20274421  0 -  38429054 C
e Pteropus_vampyrus.KN534172.1                                6949  0 -      8028 C
e Pteropus_alecto.KB030862.1                              22976896  0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         40349  0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            15188  0 -     21811 C
e Psammomys_obesus.NESX01036370.1                            10498 13 -     21651 T
e Procavia_capensis.ProCapCap_scaffold_85530                 13455  3 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             1869  0 +     22620 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Peromyscus_maniculatus.KI615324.1                       18194880 13 -  18517816 T
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12764  0 -     78924 C
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Panthera_tigris.KE722367.1                               4721355  0 -   8748460 C
e Panthera_pardus.KV860321.1                                264476  0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  151267  0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       462454  0 -    559221 C
e Orycteropus_afer.OryAfe_flattened_line_144387               9955  3 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80254 13 +    102263 T
e Ondatra_zibethicus.OndZib_scaffold_46174                   25254 13 +     28053 T
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              506765  0 -   2017862 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761680  0 + 199412804 C
e Nycticebus_coucang.k141_1127096                              250  0 +      2075 C
e Nycticebus_bengalensis.LG01                            102586326  0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9149506  0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20307615  0 +  31847680 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189371  9 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_281845                          77  0 +      1835 C
e Myotis_lucifugus.GL429869.1                              3903925  0 -   4330536 C
e Myotis_davidii.KB100139.1                                1587833  0 -   6019432 C
e Myotis_brandtii.KE162005.1                                280571  0 -  10118263 C
e Mustela_putorius.JH418006.1                               301572  0 -  14710649 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              5056  0 +     14296 C
e Murina_feae.MurFea_scaffold_85699                           6928  0 +     14753 C
e Mungos_mungo.MunMun_flattened_line_23663                   35534  0 +     37127 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 141733  0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         6029  0 -      8324 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             34405  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1850724  0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11260586 13 -  27267610 T
e Micronycteris_hirsuta.MicHir_scaffold_52381                15766  0 -     19307 C
e Microgale_talazaci.MicTal_scaffold_6613                    22438  3 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182348 13 -  29670104 T
e Meriones_unguiculatus.MerUng_scaffold_7390                 32854 13 +    140813 T
e Mellivora_capensis.MelCap_flattened_line_69365             10159  0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                        10441  0 -    207569 C
e Marmota_marmota.CZRN01000018.1                          33103196  7 -  40650429 I
e Manis_pentadactyla.KN006162.1                              50597  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18608  0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 90730  0 +     94391 C
e Lycaon_pictus.CM007581.1                                17955227 211 -  59628241 I
e Loxodonta_africana.GL010049.1                            4217433  3 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Leptonychotes_weddellii.KB714746.1                       3043161  0 +   3914936 C
e Lasiurus_borealis.LasBor_scaffold_32767                    16479  0 -     42476 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Ictidomys_tridecemlineatus.JH393364.1                    7520996  7 -   7955117 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  45128  0 +     55795 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                1000  3 +      7595 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               242434  0 +    327341 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32714  0 +     78134 C
e Glis_glis.GliGli_scaffold_19807                            31472  0 +     49224 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Galagoides_demidoff.k141_1711393                            1701  0 +     41679 C
e Felis_nigripes.FelNig_flattened_line_20823                  9652  0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20195908  0 + 205367284 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3328282 71 -   7059049 I
e Equus_przewalskii.KK951119.1                               33512  0 +    498745 C
e Equus_caballus.CM000403.2                               18531483  0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1283663  0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2145831  0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16329422  0 -  41312741 C
e Ellobius_talpinus.LOJH01081419.1                             538 13 +      8657 T
e Ellobius_lutescens.LOEQ01008920.1                          20407 13 -    110024 T
e Elephantulus_edwardii.JH947257.1                         1097777  3 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Eidolon_helvum.KE759718.1                                  10637  0 +     11740 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    6161  0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  673409  0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8630234  0 +  20541912 C
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            63648  8 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             28601  0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_37019               3028 88 -     19598 I
e Cricetulus_griseus.LT883664.1                           11667673 13 + 224834208 T
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          14520  0 -     20389 C
e Condylura_cristata.JH655891.1                           17548142 67 -  53390261 I
e Colobus_guereza.LG01                                   199948969  0 + 200372422 C
e Choloepus_hoffmanni.KN194906.1                            173497  9 +    839153 I
e Choloepus_didactylus.ChoDid_scaffold_45914                 18421  8 +     19366 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870             641  8 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2585  0 -     25243 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     93132  0 +    217609 C
e Carollia_perspicillata.CarPer_scaffold_92756                5222  0 -     11696 C
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18500499  0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17958987  0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9034722  0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    185336  0 -    185531 C
e CanFam4.chr16                                           17799210 78 -  60362399 I
e Camelus_ferus.KB017975.1                                  403236  1 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2334953  0 -   7040546 C
e Camelus_bactrianus.KN276810.1                           10002495  0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  4868  0 +     43469 C
e Arctocebus_calabarensis.k141_2318572                       11570  0 +     14667 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      185460  0 +    412891 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Ailurus_fulgens.LNAC01001112.1                             79464  0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9510688  0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     70906 13 +     87051 T
e Acinonyx_jubatus.LLWD01001279.1                           827414  0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6919  3 +     62944 g--------------------g------------g
s Allactaga_bullata.AllBul_scaffold_9566                     74602  1 -     89534 G----------------------------------
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14726 23 -     52922 acaagggaggaaggaaggatac------------a
i Allenopithecus_nigroviridis.k141_3361533               C 0 I 103
s Allochrocebus_lhoesti.k141_4309873                         14763  3 -     28001 g--------------------a------------a
i Allochrocebus_lhoesti.k141_4309873                     I 101 C 0
s Allochrocebus_preussi.k141_1442296                          5261  3 -     18505 g--------------------a------------a
i Allochrocebus_preussi.k141_1442296                     I 103 C 0
s Allochrocebus_solatus.k141_166128                           6113  3 -     12518 g--------------------a------------a
i Allochrocebus_solatus.k141_166128                      I 101 C 0
s Alouatta_belzebul.k141_3560514                              7495  3 +     51355 g--------------------g------------g
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                 609  3 -     36483 g--------------------g------------g
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              11260  3 +     28687 a--------------------g------------c
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1509701                                24882  3 +     25266 a--------------------g------------g
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_918386                             603  3 -      9457 a--------------------g------------g
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_3472759                            18189  3 -     18578 a--------------------g------------g
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              3576  3 +     47717 g--------------------g------------g
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                               281  3 +      5663 a--------------------g------------g
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             14942  3 +     50774 a--------------------g------------c
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  15518  3 -     33861 g--------------------g------------a
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            15538  3 -     34016 g--------------------g------------a
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297935  3 -   5030052 g--------------------g------------a
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             15540  3 -     34685 g--------------------g------------a
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28664  3 -     47192 g--------------------g------------a
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      12719  1 +     20879 G----------------------------------
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Avahi_laniger.k141_765380                                  53791  1 -     92717 G----------------------------------
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54418  1 +     85213 G----------------------------------
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             5277  3 -     10423 g--------------------g------------a
i Callibella_humilis.k141_1278103                        I 4 I 264
s Callimico_goeldii.k141_1091182                             24744  3 +     31915 g--------------------g------------a
i Callimico_goeldii.k141_1091182                         C 0 I 266
s Callithrix_geoffroyi.k119_512088                            5239  3 +      5267 g--------------------g------------a
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590453  3 - 189096842 g--------------------g------------a
i Callithrix_jacchus.pat_scaffold_3                      C 0 I 242
s Callithrix_kuhlii.k119_1164682                             11984  3 -     12001 G--------------------G------------A
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1168  1 -     12242 G----------------------------------
i Capromys_pilorides.CapPil_scaffold_65020               I 2 C 0
s Carlito_syrichta.NW_007247396.1                           201459  3 +    308752 g--------------------g------------a
i Carlito_syrichta.NW_007247396.1                        C 0 I 4
s Castor_canadensis.CasCan_scaffold_2074                    137186  1 +    179628 A----------------------------------
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          9898  3 -     11392 g--------------------g------------a
i Cebuella_niveiventris.k141_1251222                     C 0 I 278
s Cebuella_pygmaea.k141_1309012                               5996  3 -      7577 g--------------------g------------a
i Cebuella_pygmaea.k141_1309012                          C 0 I 248
s Cebus_albifrons.Contig27                                25652462  3 +  26074798 g--------------------g------------a
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_398305                                 1598  3 +      1777 g--------------------g------------a
i Cebus_olivaceus.k141_398305                            C 0 I 4
s Cebus_unicolor.k141_544048                                 49935  3 -     74725 g--------------------g------------a
i Cebus_unicolor.k141_544048                             C 0 I 4
s Cephalopachus_bancanus.k141_1423433                         5464  3 +     31688 g--------------------g------------a
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4475774  3 +   4669795 g--------------------a------------a
i Cercocebus_atys.KQ010504.1                             I 103 C 0
s Cercocebus_chrysogaster.k141_1540778                         278  3 +     17872 g--------------------a------------a
i Cercocebus_chrysogaster.k141_1540778                   I 8 C 0
s Cercocebus_lunulatus.k141_3342297                            935  3 -     14043 g--------------------a------------a
i Cercocebus_lunulatus.k141_3342297                      I 103 C 0
s Cercocebus_torquatus.k141_3057011                           8968  3 +     27781 g--------------------a------------a
i Cercocebus_torquatus.k141_3057011                      I 100 C 0
s Cercopithecus_ascanius.k141_1024104                         9136  3 -     20310 g--------------------a------------a
i Cercopithecus_ascanius.k141_1024104                    I 103 C 0
s Cercopithecus_cephus.k141_1078548                          12116  3 +     29689 g--------------------a------------a
i Cercopithecus_cephus.k141_1078548                      I 104 C 0
s Cercopithecus_diana.k141_1150327                            6869  3 -     20078 g--------------------a------------a
i Cercopithecus_diana.k141_1150327                       I 103 C 0
s Cercopithecus_hamlyni.k141_187466                          14786  3 -     27936 g--------------------a------------a
i Cercopithecus_hamlyni.k141_187466                      I 97 C 0
s Cercopithecus_lowei.k141_1854285                            3656  3 -     17152 g--------------------a------------a
i Cercopithecus_lowei.k141_1854285                       I 103 C 0
s Cercopithecus_albogularis.ctg5                                38817195  3 +  39242232 g--------------------a------------a
i Cercopithecus_albogularis.ctg5                               I 103 C 0
s Cercopithecus_mona.ctg39                                21222887  3 -  21565898 g--------------------a------------a
i Cercopithecus_mona.ctg39                               I 103 C 0
s Cercopithecus_neglectus.k141_2526306                       40005  3 -     53127 g--------------------a------------a
i Cercopithecus_neglectus.k141_2526306                   I 103 C 0
s Cercopithecus_nictitans.k141_1119862                         256  3 +     13442 g--------------------a------------a
i Cercopithecus_nictitans.k141_1119862                   I 103 C 0
s Cercopithecus_petaurista.k141_807961                       14805  3 -     27947 g--------------------a------------a
i Cercopithecus_petaurista.k141_807961                   I 103 C 0
s Cercopithecus_pogonias.k141_822820                         14781  3 +     17596 g--------------------a------------a
i Cercopithecus_pogonias.k141_822820                     I 103 C 0
s Cercopithecus_roloway.k141_2581234                           828  3 +     14005 g--------------------a------------a
i Cercopithecus_roloway.k141_2581234                     I 103 C 0
s Cheirogaleus_major.k141_333249                             21171  3 -     52598 G--------------------G------------A
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16536  3 +     57038 g--------------------g------------a
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1252916  1 +   2543920 g----------------------------------
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2206961                            200  3 -     15524 g--------------------g------------a
i Chiropotes_albinasus.k141_2206961                      T 250 C 0
s Chlorocebus_aethiops.ctg25                              18428765  3 -  18827391 g--------------------a------------a
i Chlorocebus_aethiops.ctg25                             I 103 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15202  3 -     50209 g--------------------a------------a
i Chlorocebus_pygerythrus.k141_1025673                   I 103 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422202  3 + 135778131 g--------------------a------------a
i Chlorocebus_sabaeus.CM001947.1                         I 103 C 0
s Colobus_angolensis.KN981557.1                            1910714  3 +   2368649 g--------------------a------------a
i Colobus_angolensis.KN981557.1                          I 106 C 0
s Colobus_polykomos.k141_906115                              37248  3 +     84244 g--------------------a------------a
i Colobus_polykomos.k141_906115                          I 106 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 50298  1 +     63868 A----------------------------------
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35876  1 +     51376 G----------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537387  3 -  12879189 G--------------------G------------A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36510  1 +     67921 G----------------------------------
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Erythrocebus_patas.Contig38                             21205370  3 -  21539334 g--------------------a------------a
i Erythrocebus_patas.Contig38                            I 101 C 0
s Eulemur_albifrons.k141_342033                              13883  3 -     14127 G--------------------G------------A
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6597  3 -     16928 G--------------------G------------A
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15616  3 -     25546 G--------------------G------------A
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12820  3 +     26330 g--------------------g------------a
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14060  3 +     23973 G--------------------G------------A
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12817  3 +     75513 g--------------------g------------a
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10747  3 +     97555 g--------------------g------------a
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              238  3 +     13026 g--------------------g------------a
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4296  3 -     17153 G--------------------G------------A
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13864  8 +    111500 G---------------GAAAGG------------A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Fukomys_damarensis.KN121974.1                             850544  1 +   3816255 g----------------------------------
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1291  2 -      9135 g--------------------g-------------
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              16174  3 -     32273 g--------------------g------------g
i Gorilla_beringei.k141_3596273                          I 114 T 114
s Gorilla_gorilla.LT578341.1                             186338311  3 + 186649187 g--------------------g------------g
i Gorilla_gorilla.LT578341.1                             I 113 T 113
s Hapalemur_alaotrensis.k141_170648                           6928  3 -     19426 G--------------------G------------A
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12077  3 -     15286 G--------------------G------------A
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13716  3 +     18253 g--------------------g------------a
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13817  3 -     41752 G--------------------G------------A
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13654  3 -     16460 G--------------------G------------A
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20662333  1 +  22651954 G----------------------------------
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hoolock_leuconedys.ctg274                                    434977  3 +    630532 g--------------------g------------g
i Hoolock_leuconedys.ctg274                                 I 105 T 105
s Hystrix_cristata.HysCri_scaffold_5660                      83222  1 +    135385 G----------------------------------
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Indri_indri.k141_3655594                                   22612  3 +     31101 g--------------------g------------a
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8276903  1 -   9596543 G----------------------------------
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lemur_catta.scaffold_24                                 15524169  3 -  30322482 G--------------------G------------A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7535 24 +     64341 gtta---agtaag--------gaaggaaggaaaga
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           4858 24 +      4941 gtta---agtaag--------gaaggaaggaaaga
i Leontocebus_illigeri.k141_3350179                      C 0 I 4
s Leontocebus_nigricollis.k141_4610752                        7576 24 +     35603 gtta---agtaag--------gaaggaaggaaaga
i Leontocebus_nigricollis.k141_4610752                   C 0 I 251
s Leontopithecus_chrysomelas.k141_1519602                    29037  3 +     38576 g--------------------g------------a
i Leontopithecus_chrysomelas.k141_1519602                C 0 I 227
s Leontopithecus_rosalia.k141_464620                         25734  3 +     66356 g--------------------g------------a
i Leontopithecus_rosalia.k141_464620                     C 0 I 230
s Lepilemur_ankaranensis.k141_596936                         11063  3 -     23766 G--------------------G------------A
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29124  3 +     45836 G--------------------G------------A
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1662  3 +     25010 A--------------------G------------A
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27060  3 +     54090 G--------------------G------------A
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6572  2 -     14121 a--------------------g-------------
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437319  3 +   1826925 g--------------------a------------a
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                               7135  3 +     40492 g--------------------a------------a
i Macaca_arctoides.k141_2326796                          I 103 C 0
s Macaca_assamensis.Contig5                               59676394  3 +  60120075 g--------------------a------------a
i Macaca_assamensis.Contig5                              I 103 C 0
s Macaca_cyclopis.k119_18836                                 12910  3 -     26193 g--------------------a------------a
i Macaca_cyclopis.k119_18836                             I 106 C 0
s Macaca_fascicularis.k141_814140                            80694  3 -    114318 g--------------------a------------a
i Macaca_fascicularis.k141_814140                        I 106 C 0
s Macaca_fuscata.k119_255327                                  6381  3 -     23192 g--------------------a------------a
i Macaca_fuscata.k119_255327                             I 102 C 0
s Macaca_leonina.k141_3550399                                15854  3 -     29190 g--------------------a------------a
i Macaca_leonina.k141_3550399                            I 106 C 0
s Macaca_maura.k141_2733130                                  24419  3 +     37952 g--------------------a------------a
i Macaca_maura.k141_2733130                              I 106 C 0
s Macaca_mulatta.NC_041758.1                             186839508  3 + 187317192 g--------------------a------------a
i Macaca_mulatta.NC_041758.1                             I 106 C 0
s Macaca_nemestrina.KQ007038.1                            25458071  3 -  25927173 g--------------------a------------a
i Macaca_nemestrina.KQ007038.1                           I 106 C 0
s Macaca_nigra.k141_1655396                                  80267  3 +     89720 g--------------------a------------a
i Macaca_nigra.k141_1655396                              I 106 C 0
s Macaca_radiata.k141_3680011                                 7268  3 +     20474 g--------------------a------------a
i Macaca_radiata.k141_3680011                            I 106 C 0
s Macaca_siberu.k141_635500                                   7068  3 -     14993 g--------------------a------------a
i Macaca_siberu.k141_635500                              I 106 C 0
s Macaca_silenus.Contig273                                  329934  3 -    668171 g--------------------a------------a
i Macaca_silenus.Contig273                               I 106 C 0
s Macaca_thibetana.k99_256239                                 5381  3 -     24072 g--------------------a------------a
i Macaca_thibetana.k99_256239                            I 103 C 0
s Macaca_tonkeana.k141_1498238                               26006  3 -     45290 g--------------------a------------a
i Macaca_tonkeana.k141_1498238                           I 106 C 0
s Mandrillus_leucophaeus.scaffold280                      23937594  3 -  24302211 g--------------------a------------a
i Mandrillus_leucophaeus.scaffold280                     I 103 C 0
s Mandrillus_sphinx.Contig270                               351718  3 +    752769 g--------------------a------------a
i Mandrillus_sphinx.Contig270                            I 99 C 0
s Mico_argentatus.k141_1239457                                5813  3 -      7380 g--------------------g------------a
i Mico_argentatus.k141_1239457                           C 0 I 242
s Mico_humeralifer.k141_1976199                               4886  3 +     18990 g--------------------g------------a
i Mico_humeralifer.k141_1976199                          C 0 I 4
s Mico_schneideri.k141_1950671                                      5825  3 -      7356 g--------------------g------------a
i Mico_schneideri.k141_1950671                                 C 0 I 242
s Microcebus_murinus.CM007674.1                           18291594  3 -  93316391 g--------------------g------------a
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9303  3 -     28506 g--------------------a------------a
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirza_zaza.k141_952172                                      9139  3 -     37649 G--------------------G------------A
i Mirza_zaza.k141_952172                                 C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71355  1 -     80779 A----------------------------------
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Nannospalax_galili.KL204047.1                            2034173  1 -   3037898 G----------------------------------
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               15305  3 +     21681 g--------------------a------------a
i Nasalis_larvatus.k141_413338                           I 110 C 0
s Ochotona_princeps.JH802162.1                             1363632  2 +   3988456 a--------------------a-------------
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  746965  1 +  11899542 G----------------------------------
i Octodon_degus.JH651603.1                               C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147435  2 + 174332312 a--------------------g-------------
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Pan_paniscus.KQ411613.1                                    44262  3 +     80009 g--------------------g------------g
i Pan_paniscus.KQ411613.1                                I 113 C 0
s Pan_troglodytes.CM009242.2                             189143165  3 + 189151597 g--------------------g------------g
i Pan_troglodytes.CM009242.2                             I 8 I 4
s Papio_anubis.CM001495.2                                183443396  3 + 183742232 g--------------------a------------a
i Papio_anubis.CM001495.2                                I 107 C 0
s Papio_cynocephalus.k141_4307930                             7042  3 +     20448 g--------------------a------------a
i Papio_cynocephalus.k141_4307930                        I 103 C 0
s Papio_hamadryas.Contig39                                20563854  3 +  20919399 g--------------------a------------a
i Papio_hamadryas.Contig39                               I 107 C 0
s Papio_kindae.k141_1936966                                   5786  3 +     41871 g--------------------a------------a
i Papio_kindae.k141_1936966                              I 103 C 0
s Papio_papio.k141_802527                                     9079  3 +     27711 g--------------------a------------a
i Papio_papio.k141_802527                                I 111 C 0
s Papio_ursinus.k141_3428135                                  9148  3 +      9205 g--------------------a------------a
i Papio_ursinus.k141_3428135                             I 104 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28234  1 -     29689 G----------------------------------
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Piliocolobus_badius.k141_1234363                           43796  3 +     62158 g--------------------a------------a
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        38543  3 +     89929 G--------------------A------------A
i Piliocolobus_gordonorum.k141_381342                    I 106 C 0
s Piliocolobus_kirkii.k141_448987                            39959  3 +     51399 G--------------------A------------A
i Piliocolobus_kirkii.k141_448987                        I 106 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296197  3 -  14605196 g--------------------a------------a
i Piliocolobus_tephrosceles.PDMG02000141.1               I 106 C 0
s Pongo_abelii.CM009266.2                                189131300  3 + 189387572 g--------------------g------------g
i Pongo_abelii.CM009266.2                                I 109 T 109
s Pongo_pygmaeus.ctg66                                     9570907  3 +   9816681 g--------------------g------------g
i Pongo_pygmaeus.ctg66                                   I 108 T 108
s Presbytis_comata.k141_677006                               73481  3 -     81375 g--------------------a------------a
i Presbytis_comata.k141_677006                           I 106 C 0
s Presbytis_mitrata.k141_1087752                              5301  3 +     19060 g--------------------a------------a
i Presbytis_mitrata.k141_1087752                         I 106 C 0
s Prolemur_simus.MPIZ01000396.1                            2596849  3 -   4620579 g--------------------g------------a
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990835  1 +   2598838 g----------------------------------
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29147  1 +     38485 g----------------------------------
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1190  1 -     13098 G----------------------------------
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26668  1 +     35766 g----------------------------------
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4855  1 -     24134 G----------------------------------
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28680  1 -     67325 G----------------------------------
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4903  1 -      6182 G----------------------------------
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15314  3 -     91421 g--------------------a------------a
i Pygathrix_cinerea.k141_1153803                         I 110 C 0
s Pygathrix_nigripes_b.ctg100                                 7609434  3 +   7812017 g--------------------a------------a
i Pygathrix_nigripes_b.ctg100                               I 110 C 0
s Pygathrix_nigripes_a.k141_215492                             15286  3 -     72585 G--------------------a------------a
i Pygathrix_nigripes_a.k141_215492                         I 110 C 0
s Rhinopithecus_bieti.k119_217274                             6997  3 -     11128 g--------------------a------------a
i Rhinopithecus_bieti.k119_217274                        I 107 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236346  3 - 195417433 g--------------------a------------a
i Rhinopithecus_roxellana.NC_044550.1                    I 103 C 0
s Rhinopithecus_strykeri.ctg102                            7672002  3 +   7961872 g--------------------a------------a
i Rhinopithecus_strykeri.ctg102                          I 107 C 0
s Saguinus_bicolor.k141_2619299                               8212 24 -      8359 gtta---agtaag--------gaaggaaggaaaga
i Saguinus_bicolor.k141_2619299                          I 15 n 228
s Saguinus_imperator.k141_2524406                             2179 15 +      2197 g--------------------gaaggaaggaaaga
i Saguinus_imperator.k141_2524406                        C 0 n 0
s Saguinus_inustus.k141_699149                               13598 15 +     13640 g--------------------gaaggaaggaaaga
i Saguinus_inustus.k141_699149                           C 0 I 4
s Saguinus_labiatus.k141_285685                               8467 15 +      8564 g--------------------gaaggaaggaaaga
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469308 24 + 209938924 gtta---agtaag--------gaaggaaggaaaga
i Saguinus_midas.LG03                                    C 0 I 458
s Saguinus_mystax.k141_374627                                 8023 15 -      9399 g--------------------gaaagaaggaaaga
i Saguinus_mystax.k141_374627                            C 0 I 387
s Saimiri_boliviensis.NW_024100920.1                     119951164  3 - 121099817 g--------------------g------------g
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23503  3 +     46362 g--------------------g------------g
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               23598  3 +     45824 g--------------------g------------g
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             40277  3 -     64574 g--------------------g------------g
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               3349  3 -     23631 g--------------------g------------g
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 23494  3 -     61129 g--------------------g------------g
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420694  3 -   5703754 g--------------------g------------a
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          55735  3 -     80660 g--------------------g------------a
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Semnopithecus_entellus.k141_1672505                          178  3 -     12572 G--------------------A------------A
i Semnopithecus_entellus.k141_1672505                    I 8 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27028  3 +     39453 g--------------------a------------a
i Semnopithecus_hypoleucos.k141_1615806                  I 110 C 0
s Semnopithecus_johnii.k141_670120                            7546  3 +     27826 g--------------------a------------a
i Semnopithecus_johnii.k141_670120                       I 109 T 109
s Semnopithecus_priam.k141_638794                             7068  3 -     19483 g--------------------a------------a
i Semnopithecus_priam.k141_638794                        I 110 C 0
s Semnopithecus_schistaceus.k141_1572284                       369  3 -     12762 G--------------------A------------A
i Semnopithecus_schistaceus.k141_1572284                 I 8 C 0
s Semnopithecus_vetulus.k141_910252                            230  3 +     13763 g--------------------a------------a
i Semnopithecus_vetulus.k141_910252                      I 8 C 0
s Tarsius_lariang.k141_2201908                               26466  3 +     70052 g--------------------g------------a
i Tarsius_lariang.k141_2201908                           C 0 I 108
s Tarsius_wallacei.k141_254427                                1371  3 -     16117 g--------------------g------------g
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428714  3 + 186847797 g--------------------a------------a
i Theropithecus_gelada.CM009954.1                        I 103 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105555  1 +    114563 G----------------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Trachypithecus_auratus.k141_722599                         11119  3 -     20410 g--------------------a------------a
i Trachypithecus_auratus.k141_722599                     I 110 C 0
s Trachypithecus_crepusculus.k141_582567                       233  3 -     12674 g--------------------a------------a
i Trachypithecus_crepusculus.k141_582567                 I 110 C 0
s Trachypithecus_cristatus.k141_580354                       11220  3 +     19930 g--------------------a------------a
i Trachypithecus_cristatus.k141_580354                   I 110 C 0
s Trachypithecus_francoisi.k141_1412647                       7631  3 -     19997 g--------------------a------------a
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            47770  3 -     60166 g--------------------a------------a
i Trachypithecus_geei.k141_277701                        I 109 C 0
s Trachypithecus_germaini.k141_912491                        15242  3 -     27529 g--------------------a------------a
i Trachypithecus_germaini.k141_912491                    I 110 C 0
s Trachypithecus_hatinhensis.k141_143409                     15186  3 -     18194 g--------------------a------------a
i Trachypithecus_hatinhensis.k141_143409                 I 110 C 0
s Trachypithecus_laotum.k141_907409                           8898  3 -     21137 g--------------------a------------a
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    7601  3 -     10723 g--------------------a------------a
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         6773  3 +      9834 g--------------------a------------a
i Trachypithecus_melamera.k141_434728                    I 110 C 0
s Trachypithecus_obscurus.k141_190785                        25086  3 +     32220 g--------------------a------------a
i Trachypithecus_obscurus.k141_190785                    I 110 C 0
s Trachypithecus_phayrei.ctg124                            5939188  3 +   6242583 g--------------------a------------a
i Trachypithecus_phayrei.ctg124                          I 110 C 0
s Trachypithecus_pileatus.k141_2007326                        8439  3 +     20839 g--------------------a------------a
i Trachypithecus_pileatus.k141_2007326                   I 109 C 0
s Varecia_rubra.k141_590885                                  11514  3 +     50397 G--------------------G------------A
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11573  3 +     24756 G--------------------G------------A
i Varecia_variegata.k141_1128296                         C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      14999  1 +     63895 G----------------------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Echinops_telfairi.JH980293.1                            48780689  3 + 111700974 I
e Otolemur_garnettii.GL873799.1                             696396  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         4233  0 +      8798 C
e Galago_senegalensis.k141_631886                             4403  0 +     11339 C
e Galago_moholi.ctg2040                                     426713  0 -    453645 C
e Mus_pahari.LT608297.1                                   31355125 13 -  89631738 T
e Mus_spretus.CM004101.1                                  90752527 13 - 130317789 T
e Mus_musculus.chr8                                       87650466 13 - 129401213 T
e Mus_caroli.LT608237.1                                   84361468 13 - 120012414 T
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Loris_tardigradus.ctg83                                  1004782  0 +   6120653 C
e Loris_lydekkerianus.k141_2539221                            5962  0 +     11245 C
e Perodicticus_potto.k141_1092580                             8620  0 +     25941 C
e Perodicticus_ibeanus.k141_855320                           10214  0 +     13100 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5478  0 +     86975 C
e Xerus_inauris.XerIna_scaffold_2302                          1179  7 +    224448 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 10902  0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5371995  0 -   5488506 C
e Ursus_maritimus.KK499267.1                               4850549  0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   53362 63 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     9343  0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2155690  0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4293354  3 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     81307  0 +    610378 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   6516  8 +      8208 I
e Tapirus_terrestris.TapTer_scaffold_755                    387334  0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      118877  0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 72732  9 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                10910  0 +     41958 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6810879  0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629              18437  0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             30850  6 +     97271 I
e Spermophilus_dauricus.KZ294078.1                         1954051  7 -   3870691 I
e Sorex_araneus.JH798187.1                                13651056 93 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               3814 63 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11982 13 -     12148 T
e Scalopus_aquaticus.ScaAqu_scaffold_662                    153257 71 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                87918  0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570728 13 +  90668790 T
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20274421  0 -  38429054 C
e Pteropus_vampyrus.KN534172.1                                6949  0 -      8028 C
e Pteropus_alecto.KB030862.1                              22976896  0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         40349  0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            15188  0 -     21811 C
e Psammomys_obesus.NESX01036370.1                            10498 13 -     21651 T
e Procavia_capensis.ProCapCap_scaffold_85530                 13455  3 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             1869  0 +     22620 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Peromyscus_maniculatus.KI615324.1                       18194880 13 -  18517816 T
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12764  0 -     78924 C
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Panthera_tigris.KE722367.1                               4721355  0 -   8748460 C
e Panthera_pardus.KV860321.1                                264476  0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  151267  0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       462454  0 -    559221 C
e Orycteropus_afer.OryAfe_flattened_line_144387               9955  3 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80254 13 +    102263 T
e Ondatra_zibethicus.OndZib_scaffold_46174                   25254 13 +     28053 T
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              506765  0 -   2017862 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761680  0 + 199412804 C
e Nycticebus_coucang.k141_1127096                              250  0 +      2075 C
e Nycticebus_bengalensis.LG01                            102586326  0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9149506  0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20307615  0 +  31847680 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189371  9 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_281845                          77  0 +      1835 C
e Myotis_lucifugus.GL429869.1                              3903925  0 -   4330536 C
e Myotis_davidii.KB100139.1                                1587833  0 -   6019432 C
e Myotis_brandtii.KE162005.1                                280571  0 -  10118263 C
e Mustela_putorius.JH418006.1                               301572  0 -  14710649 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              5056  0 +     14296 C
e Murina_feae.MurFea_scaffold_85699                           6928  0 +     14753 C
e Mungos_mungo.MunMun_flattened_line_23663                   35534  0 +     37127 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 141733  0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         6029  0 -      8324 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             34405  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1850724  0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11260586 13 -  27267610 T
e Micronycteris_hirsuta.MicHir_scaffold_52381                15766  0 -     19307 C
e Microgale_talazaci.MicTal_scaffold_6613                    22438  3 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182348 13 -  29670104 T
e Meriones_unguiculatus.MerUng_scaffold_7390                 32854 13 +    140813 T
e Mellivora_capensis.MelCap_flattened_line_69365             10159  0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                        10441  0 -    207569 C
e Marmota_marmota.CZRN01000018.1                          33103196  7 -  40650429 I
e Manis_pentadactyla.KN006162.1                              50597  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18608  0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 90730  0 +     94391 C
e Lycaon_pictus.CM007581.1                                17955227 211 -  59628241 I
e Loxodonta_africana.GL010049.1                            4217433  3 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Leptonychotes_weddellii.KB714746.1                       3043161  0 +   3914936 C
e Lasiurus_borealis.LasBor_scaffold_32767                    16479  0 -     42476 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Ictidomys_tridecemlineatus.JH393364.1                    7520996  7 -   7955117 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  45128  0 +     55795 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                1000  3 +      7595 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               242434  0 +    327341 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32714  0 +     78134 C
e Glis_glis.GliGli_scaffold_19807                            31472  0 +     49224 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Galagoides_demidoff.k141_1711393                            1701  0 +     41679 C
e Felis_nigripes.FelNig_flattened_line_20823                  9652  0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20195908  0 + 205367284 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3328282 71 -   7059049 I
e Equus_przewalskii.KK951119.1                               33512  0 +    498745 C
e Equus_caballus.CM000403.2                               18531483  0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1283663  0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2145831  0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16329422  0 -  41312741 C
e Ellobius_talpinus.LOJH01081419.1                             538 13 +      8657 T
e Ellobius_lutescens.LOEQ01008920.1                          20407 13 -    110024 T
e Elephantulus_edwardii.JH947257.1                         1097777  3 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Eidolon_helvum.KE759718.1                                  10637  0 +     11740 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    6161  0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  673409  0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8630234  0 +  20541912 C
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            63648  8 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    837190  0 +   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129             28601  0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_37019               3028 88 -     19598 I
e Cricetulus_griseus.LT883664.1                           11667673 13 + 224834208 T
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          14520  0 -     20389 C
e Condylura_cristata.JH655891.1                           17548142 67 -  53390261 I
e Colobus_guereza.LG01                                   199948969  0 + 200372422 C
e Choloepus_hoffmanni.KN194906.1                            173497  9 +    839153 I
e Choloepus_didactylus.ChoDid_scaffold_45914                 18421  8 +     19366 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870             641  8 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2585  0 -     25243 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     93132  0 +    217609 C
e Carollia_perspicillata.CarPer_scaffold_92756                5222  0 -     11696 C
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18500499  0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17958987  0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9034722  0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    185336  0 -    185531 C
e CanFam4.chr16                                           17799210 78 -  60362399 I
e Camelus_ferus.KB017975.1                                  403236  1 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2334953  0 -   7040546 C
e Camelus_bactrianus.KN276810.1                           10002495  0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  4868  0 +     43469 C
e Arctocebus_calabarensis.k141_2318572                       11570  0 +     14667 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      185460  0 +    412891 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Ailurus_fulgens.LNAC01001112.1                             79464  0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9510688  0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     70906 13 +     87051 T
e Acinonyx_jubatus.LLWD01001279.1                           827414  0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6922  4 +     62944 ag------------tg
s Acinonyx_jubatus.LLWD01001279.1                           827414  1 -   1699592 ---------------g
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510688  1 -  29979442 ---------------g
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             79464  1 -    347723 ---------------g
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14852  4 -     52922 ag------------gg
i Allenopithecus_nigroviridis.k141_3361533               I 103 T 103
s Allochrocebus_lhoesti.k141_4309873                         14766  4 -     28001 ag------------gg
i Allochrocebus_lhoesti.k141_4309873                     C 0 T 101
s Allochrocebus_preussi.k141_1442296                          5264  4 -     18505 ag------------gg
i Allochrocebus_preussi.k141_1442296                     C 0 T 103
s Allochrocebus_solatus.k141_166128                           6116  4 -     12518 ag------------gg
i Allochrocebus_solatus.k141_166128                      C 0 T 101
s Alouatta_belzebul.k141_3560514                              7498  4 +     51355 ag------------gg
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                 612  4 -     36483 ag------------gg
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              11263  4 +     28687 ag------------ga
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1509701                                24885  4 +     25266 ag------------gg
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_918386                             606  4 -      9457 ag------------gg
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_3472759                            18192  4 -     18578 ag------------gg
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              3579  4 +     47717 ag------------gg
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                               284  4 +      5663 ag------------gg
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             14945  4 +     50774 ag------------ga
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185460  1 +    412891 ---------------G
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  15521  4 -     33861 ag------------ga
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            15541  4 -     34016 ag------------ga
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297938  4 -   5030052 ag------------ga
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             15543  4 -     34685 ag------------ga
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28667  4 -     47192 ag------------ga
i Aotus_vociferans.k141_344750                           C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4868  1 +     43469 ---------------G
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  53792  1 -     92717 ---------------G
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54419  1 +     85213 ---------------G
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             5544  4 -     10423 ag------------gg
i Callibella_humilis.k141_1278103                        I 264 T 264
s Callimico_goeldii.k141_1091182                             25013  4 +     31915 ag------------gg
i Callimico_goeldii.k141_1091182                         I 266 T 266
s Callithrix_geoffroyi.k119_512088                            5242  4 +      5267 ag------------ga
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590698  4 - 189096842 ag------------gg
i Callithrix_jacchus.pat_scaffold_3                      I 242 T 242
s Callithrix_kuhlii.k119_1164682                             11987  4 -     12001 AG------------GA
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002495  1 -  17673402 ---------------a
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334953  1 -   7040546 ---------------a
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  403237  1 -   1652518 ---------------a
i Camelus_ferus.KB017975.1                               I 1 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    185336  1 -    185531 ---------------G
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034722  1 -   9314153 ---------------g
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17958987  1 -  59632846 ---------------g
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18500499  1 +  63665305 ---------------g
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           156086  4 -    496798 ag------------gg
i Carlito_syrichta.NW_007259797.1                        I 8 I 3
s Carollia_perspicillata.CarPer_scaffold_92756                5222  1 -     11696 ---------------G
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     93132  1 +    217609 ---------------G
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                         10179  4 -     11392 ag------------gg
i Cebuella_niveiventris.k141_1251222                     I 278 T 278
s Cebuella_pygmaea.k141_1309012                               6247  4 -      7577 ag------------gg
i Cebuella_pygmaea.k141_1309012                          I 248 T 248
s Cebus_albifrons.Contig27                                25652465 11 +  26074798 aggaag--aa--a-ga
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                 436 12 +     28840 aggaagg-aa--a-ga
i Cebus_olivaceus.k141_1764483                           I 11 I 97
s Cebus_unicolor.k141_1837183                                  148 16 +     14051 aggaagggaaggaggg
i Cebus_unicolor.k141_1837183                            T 420 I 107
s Cephalopachus_bancanus.k141_1423433                         5467  4 +     31688 ag------------ga
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12231558  1 +  27778364 ---------------g
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2585  1 -     25243 ---------------G
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4475777  4 +   4669795 ag------------gg
i Cercocebus_atys.KQ010504.1                             C 0 T 107
s Cercocebus_chrysogaster.k141_1540778                         281  4 +     17872 ag------------gg
i Cercocebus_chrysogaster.k141_1540778                   C 0 I 2
s Cercocebus_lunulatus.k141_3342297                            938  4 -     14043 ag------------gg
i Cercocebus_lunulatus.k141_3342297                      C 0 T 107
s Cercocebus_torquatus.k141_3057011                           8971  4 +     27781 ag------------gg
i Cercocebus_torquatus.k141_3057011                      C 0 T 104
s Cercopithecus_ascanius.k141_1024104                         9139  4 -     20310 ag------------gg
i Cercopithecus_ascanius.k141_1024104                    C 0 T 103
s Cercopithecus_cephus.k141_1078548                          12119  4 +     29689 ag------------gg
i Cercopithecus_cephus.k141_1078548                      C 0 T 104
s Cercopithecus_diana.k141_1150327                            6872  4 -     20078 ag------------gg
i Cercopithecus_diana.k141_1150327                       C 0 T 103
s Cercopithecus_hamlyni.k141_187466                          14789  4 -     27936 ag------------gg
i Cercopithecus_hamlyni.k141_187466                      C 0 T 97
s Cercopithecus_lowei.k141_1854285                            3659  4 -     17152 ag------------gg
i Cercopithecus_lowei.k141_1854285                       C 0 T 103
s Cercopithecus_albogularis.ctg5                                38817198  4 +  39242232 ag------------gg
i Cercopithecus_albogularis.ctg5                               C 0 T 103
s Cercopithecus_mona.ctg39                                21222890  4 -  21565898 ag------------gg
i Cercopithecus_mona.ctg39                               C 0 T 103
s Cercopithecus_neglectus.k141_2526306                       40008  4 -     53127 ag------------gg
i Cercopithecus_neglectus.k141_2526306                   C 0 T 103
s Cercopithecus_nictitans.k141_1119862                         259  4 +     13442 ag------------gg
i Cercopithecus_nictitans.k141_1119862                   C 0 T 103
s Cercopithecus_petaurista.k141_807961                       14808  4 -     27947 ag------------gg
i Cercopithecus_petaurista.k141_807961                   C 0 T 103
s Cercopithecus_pogonias.k141_822820                         14784  4 +     17596 ag------------gg
i Cercopithecus_pogonias.k141_822820                     C 0 T 103
s Cercopithecus_roloway.k141_2581234                           831  4 +     14005 ag------------gg
i Cercopithecus_roloway.k141_2581234                     C 0 T 103
s Cheirogaleus_major.k141_333249                             21174  4 -     52598 AA------------AG
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16539  4 +     57038 aa------------gg
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2206961                            203  4 -     15524 ag------------ga
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18428768  4 -  18827391 ag------------gg
i Chlorocebus_aethiops.ctg25                             C 0 T 103
s Chlorocebus_pygerythrus.k141_1025673                       15205  4 -     50209 ag------------gg
i Chlorocebus_pygerythrus.k141_1025673                   C 0 T 103
s Chlorocebus_sabaeus.CM001947.1                         135422205  4 + 135778131 ag------------gg
i Chlorocebus_sabaeus.CM001947.1                         C 0 T 103
s Colobus_angolensis.KN981557.1                            1910717  4 +   2368649 ag------------gg
i Colobus_angolensis.KN981557.1                          C 0 T 106
s Colobus_guereza.LG01                                   199948969  4 + 200372422 AG------------GG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37251  4 +     84244 ag------------gg
i Colobus_polykomos.k141_906115                          C 0 T 106
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14520  1 -     20389 ---------------G
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28601  1 -     87169 ---------------G
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537390  4 -  12879189 AG------------GA
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630234  1 +  20541912 ---------------g
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673409  1 +   1390856 ---------------g
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6161  1 +    198055 ---------------G
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE759718.1                                  10637  1 +     11740 ---------------g
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Enhydra_lutris.KZ291758.1                               16329422  1 -  41312741 ---------------g
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2145831  1 -  14770903 ---------------g
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1283663  1 +   4378816 ---------------g
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18531483  1 -  39960074 ---------------g
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               33512  1 +    498745 ---------------g
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21205373  4 -  21539334 ag------------gg
i Erythrocebus_patas.Contig38                            C 0 T 101
s Eulemur_albifrons.k141_342033                              13886  4 -     14127 AA------------GG
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6600  4 -     16928 AA------------GG
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15619  9 -     25546 AA-------GGAAAGG
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12823  9 +     26330 aag--g--aa--a-gg
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14063  4 +     23973 AA------------GG
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12820  9 +     75513 aag--g--aa--a-gg
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10750  9 +     97555 aag--g--aa--a-gg
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              241  9 +     13026 aag--g--aa--a-gg
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4299  4 -     17153 AA------------GG
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13872  4 +    111500 AA------------GG
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237065  1 + 206538554 ---------------g
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195908  1 + 205367284 ---------------g
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  9652  1 -     36744 ---------------G
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1293  2 -      9135 --------------gg
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              16063  4 -     32273 ag------------ga
i Gorilla_beringei.k141_3596273                          T 114 C 0
s Gorilla_gorilla.LT578341.1                             186338201  4 + 186649187 ag------------ga
i Gorilla_gorilla.LT578341.1                             T 113 C 0
s Hapalemur_alaotrensis.k141_170648                           6931  4 -     19426 AA------------GG
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12080  4 -     15286 AA------------GG
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13719  4 +     18253 aa------------gg
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13820  4 -     41752 AA------------GG
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13657  4 -     16460 AA------------GG
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242434  1 +    327341 ---------------G
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hoolock_leuconedys.ctg274                                    434875  4 +    630532 ag------------ga
i Hoolock_leuconedys.ctg274                                 T 105 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45128  1 +     55795 ---------------C
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Indri_indri.k141_3655594                                   22615  4 +     31101 aa------------gg
i Indri_indri.k141_3655594                               C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    16479  1 -     42476 ---------------G
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15524172  4 -  30322482 AA------------GG
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7559  4 +     64341 ag------------ga
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                            163  4 -     35062 ag------------gg
i Leontocebus_illigeri.k141_1304848                      I 11 I 24
s Leontocebus_nigricollis.k141_4610752                        7851  4 +     35603 ag------------gg
i Leontocebus_nigricollis.k141_4610752                   I 251 T 251
s Leontopithecus_chrysomelas.k141_1519602                    29267  4 +     38576 ag------------gg
i Leontopithecus_chrysomelas.k141_1519602                I 227 C 0
s Leontopithecus_rosalia.k141_464620                         25967  4 +     66356 ag------------gg
i Leontopithecus_rosalia.k141_464620                     I 230 C 0
s Lepilemur_ankaranensis.k141_596936                         11066  4 -     23766 AA------------GG
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29127  4 +     45836 AA------------GG
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1665  4 +     25010 AA------------GG
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27063  4 +     54090 AA------------GG
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3043161  1 +   3914936 ---------------g
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6574  2 -     14121 --------------ag
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437322  4 +   1826925 ag------------cg
i Lophocebus_aterrimus.ctg367                            C 0 T 113
s Lycaon_pictus.CM007581.1                                17955438  1 -  59628241 ---------------N
i Lycaon_pictus.CM007581.1                               I 211 C 0
s Macaca_arctoides.k141_2326796                               7138  4 +     40492 ag------------gg
i Macaca_arctoides.k141_2326796                          C 0 T 103
s Macaca_assamensis.Contig5                               59676397  4 +  60120075 ag------------gg
i Macaca_assamensis.Contig5                              C 0 T 103
s Macaca_cyclopis.k119_18836                                 12913  4 -     26193 ag------------gg
i Macaca_cyclopis.k119_18836                             C 0 T 106
s Macaca_fascicularis.k141_814140                            80697  4 -    114318 ag------------gg
i Macaca_fascicularis.k141_814140                        C 0 T 106
s Macaca_fuscata.k119_255327                                  6384  4 -     23192 ag------------gg
i Macaca_fuscata.k119_255327                             C 0 T 102
s Macaca_leonina.k141_3550399                                15857  4 -     29190 ag------------gg
i Macaca_leonina.k141_3550399                            C 0 T 106
s Macaca_maura.k141_2733130                                  24422  4 +     37952 ag------------gg
i Macaca_maura.k141_2733130                              C 0 T 106
s Macaca_mulatta.NC_041758.1                             186839511  4 + 187317192 ag------------gg
i Macaca_mulatta.NC_041758.1                             C 0 T 106
s Macaca_nemestrina.KQ007038.1                            25458074  4 -  25927173 ag------------gg
i Macaca_nemestrina.KQ007038.1                           C 0 T 106
s Macaca_nigra.k141_1655396                                  80270  4 +     89720 ag------------gg
i Macaca_nigra.k141_1655396                              C 0 T 106
s Macaca_radiata.k141_3680011                                 7271  4 +     20474 ag------------gg
i Macaca_radiata.k141_3680011                            C 0 T 106
s Macaca_siberu.k141_635500                                   7071  4 -     14993 ag------------gg
i Macaca_siberu.k141_635500                              C 0 T 106
s Macaca_silenus.Contig273                                  329937  4 -    668171 ag------------gg
i Macaca_silenus.Contig273                               C 0 T 106
s Macaca_thibetana.k99_256239                                 5384  4 -     24072 ag------------gg
i Macaca_thibetana.k99_256239                            C 0 T 103
s Macaca_tonkeana.k141_1498238                               26009  4 -     45290 ag------------gg
i Macaca_tonkeana.k141_1498238                           C 0 T 106
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90730  1 +     94391 ---------------G
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23937597  4 -  24302211 ag------------gg
i Mandrillus_leucophaeus.scaffold280                     C 0 T 107
s Mandrillus_sphinx.Contig270                               351721  4 +    752769 ag------------gg
i Mandrillus_sphinx.Contig270                            C 0 T 103
s Manis_javanica.JSZB01003497.1                              18608  1 +    737560 ---------------g
i Manis_javanica.JSZB01003497.1                          C 0 I 4
s Manis_pentadactyla.KN006162.1                              50597  1 -    317179 ---------------g
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        10441  1 -    207569 ---------------A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10159  1 +     13704 ---------------G
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mico_argentatus.k141_1239457                                6058  4 -      7380 ag------------gg
i Mico_argentatus.k141_1239457                           I 242 T 242
s Mico_humeralifer.k141_2457295                                287  4 +      1079 ag------------gg
i Mico_humeralifer.k141_2457295                          I 11 I 6
s Mico_schneideri.k141_1950671                                      6070  4 -      7356 ag------------gg
i Mico_schneideri.k141_1950671                                 I 242 T 242
s Microcebus_murinus.CM007674.1                           18291597  4 -  93316391 aa------------ag
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                15766  1 -     19307 ---------------G
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850724  1 +   8254450 ---------------c
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34405  1 +     64694 ---------------C
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9306  4 -     28506 ag------------gg
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6029  1 -      8324 ---------------G
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      9142  4 -     37649 AA------------GG
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141733  1 -    366855 ---------------G
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35534  1 +     37127 ---------------G
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           6928  1 +     14753 ---------------G
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mustela_putorius.JH418006.1                               301572  1 -  14710649 ---------------g
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                280571  1 -  10118263 ---------------g
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1587833  1 -   6019432 ---------------g
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3903925  1 -   4330536 ---------------g
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                          77  1 +      1835 ---------------G
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 C 0
s Nasalis_larvatus.k141_413338                               15308  4 +     21681 ag------------gg
i Nasalis_larvatus.k141_413338                           C 0 T 110
s Neomonachus_schauinslandi.NINY01007730.1                20307615  1 +  31847680 ---------------g
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149506  1 -   9404916 ---------------g
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Ochotona_princeps.JH802162.1                             1363634  2 +   3988456 --------------ag
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              506765  1 -   2017862 ---------------g
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147437  2 + 174332312 --------------ag
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462454  1 -    559221 ---------------g
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Pan_paniscus.KQ411613.1                                    44265  4 +     80009 ag------------gg
i Pan_paniscus.KQ411613.1                                C 0 T 113
s Pan_troglodytes.NBAG03001836.1                             30190  4 +     51860 ag------------gg
i Pan_troglodytes.NBAG03001836.1                         I 139 I 736
s Panthera_onca.PanOnc_flattened_line_3271                  151267  1 +    230217 ---------------G
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                264476  1 +  18783137 ---------------g
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4721355  1 -   8748460 ---------------g
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183443399  4 + 183742232 ag------------gg
i Papio_anubis.CM001495.2                                C 0 T 111
s Papio_cynocephalus.k141_4307930                             7045  4 +     20448 ag------------gg
i Papio_cynocephalus.k141_4307930                        C 0 T 107
s Papio_hamadryas.Contig39                                20563857  4 +  20919399 ag------------gg
i Papio_hamadryas.Contig39                               C 0 T 111
s Papio_kindae.k141_1936966                                   5789  4 +     41871 ag------------gg
i Papio_kindae.k141_1936966                              C 0 T 107
s Papio_papio.k141_802527                                     9082  4 +     27711 ag------------gg
i Papio_papio.k141_802527                                C 0 T 115
s Papio_ursinus.k141_3428135                                  9151  4 +      9205 ag------------gg
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12764  1 -     78924 ---------------G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Piliocolobus_badius.k141_1234363                           43799  4 +     62158 ag------------gg
i Piliocolobus_badius.k141_1234363                       C 0 T 106
s Piliocolobus_gordonorum.k141_381342                        38546  4 +     89929 AG------------GG
i Piliocolobus_gordonorum.k141_381342                    C 0 T 106
s Piliocolobus_kirkii.k141_448987                            39962  4 +     51399 AG------------GG
i Piliocolobus_kirkii.k141_448987                        C 0 T 106
s Piliocolobus_tephrosceles.PDMG02000141.1                14296200  4 -  14605196 ag------------gg
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 T 106
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1869  1 +     22620 ---------------G
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189131194  4 + 189387572 ag------------ga
i Pongo_abelii.CM009266.2                                T 109 C 0
s Pongo_pygmaeus.ctg66                                     9570802  4 +   9816681 ag------------ga
i Pongo_pygmaeus.ctg66                                   T 108 C 0
s Presbytis_comata.k141_677006                               73484  4 -     81375 ag------------gg
i Presbytis_comata.k141_677006                           C 0 T 110
s Presbytis_mitrata.k141_1087752                              5304  4 +     19060 ag------------gg
i Presbytis_mitrata.k141_1087752                         C 0 T 110
s Prolemur_simus.MPIZ01000396.1                            2596852  4 -   4620579 aa------------gg
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990836  1 +   2598838 ---------------g
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29148  1 +     38485 ---------------g
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1191  1 -     13098 ---------------G
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26669  1 +     35766 ---------------g
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4856  1 -     24134 ---------------G
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28681  1 -     67325 ---------------G
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4904  1 -      6182 ---------------G
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            15188  1 -     21811 ---------------g
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40349  1 +     42204 ---------------G
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22976896  1 +  28871421 ---------------g
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                6949  1 -      8028 ---------------g
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20274421  1 -  38429054 ---------------g
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15317  4 -     91421 ag------------gg
i Pygathrix_cinerea.k141_1153803                         C 0 T 110
s Pygathrix_nigripes_b.ctg100                                 7609437  4 +   7812017 ag------------gg
i Pygathrix_nigripes_b.ctg100                               C 0 T 110
s Pygathrix_nigripes_a.k141_215492                             15289  4 -     72585 ag------------gg
i Pygathrix_nigripes_a.k141_215492                         C 0 T 110
s Rhinopithecus_bieti.k119_217274                             7000  4 -     11128 ag------------gg
i Rhinopithecus_bieti.k119_217274                        C 0 T 107
s Rhinopithecus_roxellana.NC_044550.1                     91236349  4 - 195417433 ag------------gg
i Rhinopithecus_roxellana.NC_044550.1                    C 0 T 103
s Rhinopithecus_strykeri.ctg102                            7672005  4 +   7961872 ag------------gg
i Rhinopithecus_strykeri.ctg102                          C 0 T 107
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87918  1 -     96226 ---------------G
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_8081                                   439  4 +     42994 ag------------gg
i Saguinus_bicolor.k141_8081                             I 228 C 0
s Saguinus_imperator.k141_57697                                224  4 +      1030 ag------------gg
i Saguinus_imperator.k141_57697                          I 11 C 0
s Saguinus_inustus.k141_3945547                                299  4 -      8737 ag------------gg
i Saguinus_inustus.k141_3945547                          I 11 I 28
s Saguinus_labiatus.k141_285685                               8482  4 +      8564 ag------------ga
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469790  4 + 209938924 ag------------gg
i Saguinus_midas.LG03                                    I 458 T 458
s Saguinus_mystax.k141_374627                                 8425  4 -      9399 ag------------gg
i Saguinus_mystax.k141_374627                            I 387 T 387
s Saimiri_boliviensis.NW_024100920.1                     119951167  4 - 121099817 ag------------gg
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23506  4 +     46362 ag------------gg
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               23601  4 +     45824 ag------------gg
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             40280  4 -     64574 ag------------gg
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               3352  4 -     23631 ag------------gg
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 23497  4 -     61129 ag------------gg
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420697  4 -   5703754 ag------------ga
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          55738  4 -     80660 ag------------ga
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Semnopithecus_entellus.k141_1672505                          181  4 -     12572 AG------------GG
i Semnopithecus_entellus.k141_1672505                    C 0 I 2
s Semnopithecus_hypoleucos.k141_1615806                      27031  4 +     39453 ag------------gg
i Semnopithecus_hypoleucos.k141_1615806                  C 0 T 110
s Semnopithecus_johnii.k141_670120                            7440  4 +     27826 ag------------ga
i Semnopithecus_johnii.k141_670120                       T 109 C 0
s Semnopithecus_priam.k141_638794                             7071  4 -     19483 ag------------gg
i Semnopithecus_priam.k141_638794                        C 0 T 110
s Semnopithecus_schistaceus.k141_1572284                       372  4 -     12762 CG------------GG
i Semnopithecus_schistaceus.k141_1572284                 C 0 T 104
s Semnopithecus_vetulus.k141_910252                            233  4 +     13763 ag------------gg
i Semnopithecus_vetulus.k141_910252                      C 0 T 109
s Suricata_suricatta.SurSur_flattened_line_6629              18437  1 -    196729 ---------------G
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6810879  1 +  69701581 ---------------g
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                10910  1 +     41958 ---------------G
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118877  1 -    156842 ---------------G
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387334  1 +    539355 ---------------G
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               26577  4 +     70052 ag------------gg
i Tarsius_lariang.k141_2201908                           I 108 T 108
s Tarsius_wallacei.k141_254427                                1374  4 -     16117 ag------------gg
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428717  4 + 186847797 ag------------gg
i Theropithecus_gelada.CM009954.1                        C 0 T 107
s Tonatia_saurophila.TonSau_scaffold_294                     81307  1 +    610378 ---------------G
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         11122  4 -     20410 ag------------gg
i Trachypithecus_auratus.k141_722599                     C 0 T 110
s Trachypithecus_crepusculus.k141_582567                       236  4 -     12674 ag------------gg
i Trachypithecus_crepusculus.k141_582567                 C 0 T 110
s Trachypithecus_cristatus.k141_580354                       11223  4 +     19930 ag------------gg
i Trachypithecus_cristatus.k141_580354                   C 0 T 110
s Trachypithecus_francoisi.k141_1412647                       7634  4 -     19997 ag------------gg
i Trachypithecus_francoisi.k141_1412647                  C 0 T 110
s Trachypithecus_geei.k141_277701                            47773  4 -     60166 ag------------gg
i Trachypithecus_geei.k141_277701                        C 0 T 109
s Trachypithecus_germaini.k141_912491                        15245  4 -     27529 ag------------gg
i Trachypithecus_germaini.k141_912491                    C 0 T 110
s Trachypithecus_hatinhensis.k141_143409                     15189  4 -     18194 ag------------gg
i Trachypithecus_hatinhensis.k141_143409                 C 0 T 110
s Trachypithecus_laotum.k141_907409                           8901  4 -     21137 ag------------gg
i Trachypithecus_laotum.k141_907409                      C 0 T 110
s Trachypithecus_leucocephalus.k141_587342                    7604  4 -     10723 ag------------gg
i Trachypithecus_leucocephalus.k141_587342               C 0 T 110
s Trachypithecus_melamera.k141_434728                         6776  4 +      9834 ag------------gg
i Trachypithecus_melamera.k141_434728                    C 0 T 110
s Trachypithecus_obscurus.k141_190785                        25089  4 +     32220 ag------------gg
i Trachypithecus_obscurus.k141_190785                    C 0 T 110
s Trachypithecus_phayrei.ctg124                            5939191  4 +   6242583 ag------------gg
i Trachypithecus_phayrei.ctg124                          C 0 T 110
s Trachypithecus_pileatus.k141_2007326                        8442  4 +     20839 ag------------gg
i Trachypithecus_pileatus.k141_2007326                   C 0 T 109
s Tupaia_chinensis.KB320699.1                              2155690  2 +   4065304 --------------ag
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9343  2 -     10553 --------------AG
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4850549  1 -   5085361 ---------------g
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  11517  4 +     50397 AA------------GG
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11576  4 +     24756 AA------------GG
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371995  1 -   5488506 ---------------g
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10902  1 -     43706 ---------------G
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          5478  1 +     86975 ---------------g
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Echinops_telfairi.JH980293.1                            48780689  3 + 111700974 I
e Otolemur_garnettii.GL873799.1                             696396  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         4233  0 +      8798 C
e Galago_senegalensis.k141_631886                             4403  0 +     11339 C
e Galago_moholi.ctg2040                                     426713  0 -    453645 C
e Mus_pahari.LT608297.1                                   31355125 13 -  89631738 T
e Mus_spretus.CM004101.1                                  90752527 13 - 130317789 T
e Mus_musculus.chr8                                       87650466 13 - 129401213 T
e Mus_caroli.LT608237.1                                   84361468 13 - 120012414 T
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Loris_tardigradus.ctg83                                  1004782  0 +   6120653 C
e Loris_lydekkerianus.k141_2539221                            5962  0 +     11245 C
e Perodicticus_potto.k141_1092580                             8620  0 +     25941 C
e Perodicticus_ibeanus.k141_855320                           10214  0 +     13100 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      15000  0 +     63895 C
e Xerus_inauris.XerIna_scaffold_2302                          1179  7 +    224448 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   53362 63 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4293354  3 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   6516  8 +      8208 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              105556  0 +    114563 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 72732  9 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             30850  6 +     97271 I
e Spermophilus_dauricus.KZ294078.1                         1954051  7 -   3870691 I
e Sorex_araneus.JH798187.1                                13651056 93 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               3814 63 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11982 13 -     12148 T
e Scalopus_aquaticus.ScaAqu_scaffold_662                    153257 71 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570728 13 +  90668790 T
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Psammomys_obesus.NESX01036370.1                            10498 13 -     21651 T
e Procavia_capensis.ProCapCap_scaffold_85530                 13455  3 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     28235  0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18194880 13 -  18517816 T
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orycteropus_afer.OryAfe_flattened_line_144387               9955  3 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80254 13 +    102263 T
e Ondatra_zibethicus.OndZib_scaffold_46174                   25254 13 +     28053 T
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  746966  0 +  11899542 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761680  0 + 199412804 C
e Nycticebus_coucang.k141_1127096                              250  0 +      2075 C
e Nycticebus_bengalensis.LG01                            102586326  0 - 196305487 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Nannospalax_galili.KL204047.1                            2034174  0 -   3037898 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189371  9 +    196477 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     71356  0 -     80779 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              5056  0 +     14296 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11260586 13 -  27267610 T
e Microgale_talazaci.MicTal_scaffold_6613                    22438  3 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182348 13 -  29670104 T
e Meriones_unguiculatus.MerUng_scaffold_7390                 32854 13 +    140813 T
e Marmota_marmota.CZRN01000018.1                          33103196  7 -  40650429 I
e Loxodonta_africana.GL010049.1                            4217433  3 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276904  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Ictidomys_tridecemlineatus.JH393364.1                    7520996  7 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      83223  0 +    135385 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                1000  3 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20662334  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32714  0 +     78134 C
e Glis_glis.GliGli_scaffold_19807                            31472  0 +     49224 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Galagoides_demidoff.k141_1711393                            1701  0 +     41679 C
e Fukomys_damarensis.KN121974.1                             850545  0 +   3816255 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3328282 71 -   7059049 I
e Ellobius_talpinus.LOJH01081419.1                             538 13 +      8657 T
e Ellobius_lutescens.LOEQ01008920.1                          20407 13 -    110024 T
e Elephantulus_edwardii.JH947257.1                         1097777  3 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    36511  0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            63648  8 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35877  0 +     51376 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    837190  0 +   1526836 C
e Crocidura_indochinensis.CroInd_scaffold_37019               3028 88 -     19598 I
e Cricetulus_griseus.LT883664.1                           11667673 13 + 224834208 T
e Cricetomys_gambianus.CriGam_scaffold_18520                 50299  0 +     63868 C
e Condylura_cristata.JH655891.1                           17548142 67 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            173497  9 +    839153 I
e Choloepus_didactylus.ChoDid_scaffold_45914                 18421  8 +     19366 I
e Chinchilla_lanigera.JH722012.1                           1252917  0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_138870             641  8 -      8501 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Castor_canadensis.CasCan_scaffold_2074                    137187  0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                    1169  0 -     12242 C
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e CanFam4.chr16                                           17799210 78 -  60362399 I
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Arctocebus_calabarensis.k141_2318572                       11570  0 +     14667 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      12720  0 +     20879 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74603  0 -     89534 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     70906 13 +     87051 T

a score=0.000000
s hg38.chrUn_KI270753v1                                       6926 1 +     62944 a
s Acinonyx_jubatus.LLWD01001279.1                           827415 1 -   1699592 a
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 7
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510689 1 -  29979442 a
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 7
s Ailurus_fulgens.LNAC01001112.1                             79465 1 -    347723 a
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 7
s Allenopithecus_nigroviridis.k141_3361533                   14753 1 -     52922 a
i Allenopithecus_nigroviridis.k141_3361533               T 103 C 0
s Allochrocebus_lhoesti.k141_4309873                         14669 1 -     28001 a
i Allochrocebus_lhoesti.k141_4309873                     T 101 C 0
s Allochrocebus_preussi.k141_1442296                          5165 1 -     18505 a
i Allochrocebus_preussi.k141_1442296                     T 103 C 0
s Allochrocebus_solatus.k141_166128                           6019 1 -     12518 a
i Allochrocebus_solatus.k141_166128                      T 101 C 0
s Alouatta_belzebul.k141_3560514                              7502 1 +     51355 a
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                 616 1 -     36483 a
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              11267 1 +     28687 a
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1509701                                24889 1 +     25266 a
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_918386                             610 1 -      9457 a
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_3472759                            18196 1 -     18578 a
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              3583 1 +     47717 a
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                               288 1 +      5663 a
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             14949 1 +     50774 a
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185461 1 +    412891 A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 7
s Aotus_azarae.k141_3104676                                  15525 1 -     33861 a
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            15545 1 -     34016 a
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297942 1 -   5030052 a
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             15547 1 -     34685 a
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28671 1 -     47192 a
i Aotus_vociferans.k141_344750                           C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4869 1 +     43469 A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 7
s Avahi_laniger.k141_765380                                  53793 1 -     92717 A
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54420 1 +     85213 A
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             5284 1 -     10423 a
i Callibella_humilis.k141_1278103                        T 264 C 0
s Callimico_goeldii.k141_1091182                             24751 1 +     31915 a
i Callimico_goeldii.k141_1091182                         T 266 C 0
s Callithrix_geoffroyi.k119_512088                            5246 1 +      5267 a
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590460 1 - 189096842 a
i Callithrix_jacchus.pat_scaffold_3                      T 242 C 0
s Callithrix_kuhlii.k119_1164682                             11991 1 -     12001 A
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002496 1 -  17673402 a
i Camelus_bactrianus.KN276810.1                          C 0 I 7
s Camelus_dromedarius.KN272107.1                           2334954 1 -   7040546 a
i Camelus_dromedarius.KN272107.1                         C 0 I 7
s Camelus_ferus.KB017975.1                                  403238 1 -   1652518 a
i Camelus_ferus.KB017975.1                               C 0 I 7
s Canis_lupus_VD.CanFam_VD_scaffold_7008                    185337 1 -    185531 A
i Canis_lupus_VD.CanFam_VD_scaffold_7008                 C 0 n 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034723 1 -   9314153 a
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 7
s Canis_lupus_familiaris.chr16                            17958988 1 -  59632846 a
i Canis_lupus_familiaris.chr16                           C 0 I 218
s Canis_lupus_orion.HG994398.1                            18500500 1 +  63665305 a
i Canis_lupus_orion.HG994398.1                           C 0 I 7
s Carlito_syrichta.NW_007247396.1                           201466 1 +    308752 a
i Carlito_syrichta.NW_007247396.1                        I 4 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5223 1 -     11696 A
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 2
s Catagonus_wagneri.CatWag_scaffold_2839                     93133 1 +    217609 A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 7
s Cebuella_niveiventris.k141_1251222                          9905 1 -     11392 a
i Cebuella_niveiventris.k141_1251222                     T 278 C 0
s Cebuella_pygmaea.k141_1309012                               6003 1 -      7577 a
i Cebuella_pygmaea.k141_1309012                          T 248 C 0
s Cebus_albifrons.Contig27                                25652476 1 +  26074798 a
i Cebus_albifrons.Contig27                               C 0 I 98
s Cebus_olivaceus.k141_398305                                 1605 1 +      1777 a
i Cebus_olivaceus.k141_398305                            I 4 I 78
s Cebus_unicolor.k141_544048                                 49942 1 -     74725 a
i Cebus_unicolor.k141_544048                             I 4 I 80
s Cephalopachus_bancanus.k141_1423433                         5471 1 +     31688 a
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12231559 1 +  27778364 a
i Ceratotherium_simum.JH767749.1                         C 0 I 8
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2586 1 -     25243 A
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 I 8
s Cercocebus_atys.KQ010504.1                               4475674 1 +   4669795 a
i Cercocebus_atys.KQ010504.1                             T 107 C 0
s Cercocebus_chrysogaster.k141_393940                        14219 1 -     19203 a
i Cercocebus_chrysogaster.k141_393940                    I 3 C 0
s Cercocebus_lunulatus.k141_3342297                            835 1 -     14043 a
i Cercocebus_lunulatus.k141_3342297                      T 107 C 0
s Cercocebus_torquatus.k141_3057011                           8871 1 +     27781 a
i Cercocebus_torquatus.k141_3057011                      T 104 C 0
s Cercopithecus_ascanius.k141_1024104                         9040 1 -     20310 a
i Cercopithecus_ascanius.k141_1024104                    T 103 C 0
s Cercopithecus_cephus.k141_1078548                          12019 1 +     29689 a
i Cercopithecus_cephus.k141_1078548                      T 104 C 0
s Cercopithecus_diana.k141_1150327                            6773 1 -     20078 a
i Cercopithecus_diana.k141_1150327                       T 103 C 0
s Cercopithecus_hamlyni.k141_187466                          14696 1 -     27936 a
i Cercopithecus_hamlyni.k141_187466                      T 97 C 0
s Cercopithecus_lowei.k141_1854285                            3560 1 -     17152 a
i Cercopithecus_lowei.k141_1854285                       T 103 C 0
s Cercopithecus_albogularis.ctg5                                38817099 1 +  39242232 a
i Cercopithecus_albogularis.ctg5                               T 103 C 0
s Cercopithecus_mona.ctg39                                21222791 1 -  21565898 a
i Cercopithecus_mona.ctg39                               T 103 C 0
s Cercopithecus_neglectus.k141_2526306                       39909 1 -     53127 A
i Cercopithecus_neglectus.k141_2526306                   T 103 C 0
s Cercopithecus_nictitans.k141_1119862                         160 1 +     13442 a
i Cercopithecus_nictitans.k141_1119862                   T 103 C 0
s Cercopithecus_petaurista.k141_807961                       14709 1 -     27947 a
i Cercopithecus_petaurista.k141_807961                   T 103 C 0
s Cercopithecus_pogonias.k141_822820                         14685 1 +     17596 a
i Cercopithecus_pogonias.k141_822820                     T 103 C 0
s Cercopithecus_roloway.k141_2581234                           732 1 +     14005 a
i Cercopithecus_roloway.k141_2581234                     T 103 C 0
s Cheirogaleus_major.k141_333249                             21178 1 -     52598 A
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16543 1 +     57038 a
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2206961                            207 1 -     15524 a
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18428669 1 -  18827391 a
i Chlorocebus_aethiops.ctg25                             T 103 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15106 1 -     50209 a
i Chlorocebus_pygerythrus.k141_1025673                   T 103 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422106 1 + 135778131 a
i Chlorocebus_sabaeus.CM001947.1                         T 103 C 0
s Colobus_angolensis.KN981557.1                            1910615 1 +   2368649 a
i Colobus_angolensis.KN981557.1                          T 106 C 0
s Colobus_guereza.LG01                                   199948973 1 + 200372422 A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37149 1 +     84244 a
i Colobus_polykomos.k141_906115                          T 106 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14521 1 -     20389 A
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 4
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28602 1 -     87169 A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 7
s Daubentonia_madagascariensis.ctg71                      12537394 1 -  12879189 A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630235 1 +  20541912 a
i Desmodus_rotundus.KZ672289.1                           C 0 I 7
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673410 1 +   1390856 a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 8
s Diceros_bicornis.DicBicMic_scaffold_5955                    6162 1 +    198055 A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 8
s Eidolon_helvum.KE759718.1                                  10638 1 +     11740 g
i Eidolon_helvum.KE759718.1                              C 0 I 4
s Enhydra_lutris.KZ291758.1                               16329423 1 -  41312741 a
i Enhydra_lutris.KZ291758.1                              C 0 I 7
s Eptesicus_fuscus.JH977646.1                              2145832 1 -  14770903 a
i Eptesicus_fuscus.JH977646.1                            C 0 I 13
s Equus_asinus.JREZ01000139.1                              1283664 1 +   4378816 a
i Equus_asinus.JREZ01000139.1                            C 0 I 8
s Equus_caballus.CM000403.2                               18531484 1 -  39960074 a
i Equus_caballus.CM000403.2                              C 0 I 8
s Equus_przewalskii.KK951119.1                               33513 1 +    498745 a
i Equus_przewalskii.KK951119.1                           C 0 I 8
s Erythrocebus_patas.Contig38                             21205276 1 -  21539334 a
i Erythrocebus_patas.Contig38                            T 101 C 0
s Eulemur_albifrons.k141_342033                              13890 1 -     14127 A
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6604 1 -     16928 A
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15628 1 -     25546 A
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12832 1 +     26330 a
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14067 1 +     23973 A
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12829 1 +     75513 a
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10759 1 +     97555 a
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              250 1 +     13026 a
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4303 1 -     17153 A
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13876 1 +    111500 A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237066 1 + 206538554 a
i Felis_catus.CM001381.2                                 C 0 I 7
s Felis_catus_fca126.CM031415.1                           20195909 1 + 205367284 a
i Felis_catus_fca126.CM031415.1                          C 0 I 7
s Felis_nigripes.FelNig_flattened_line_20823                  9653 1 -     36744 A
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 7
s Galeopterus_variegatus.GalVar_scaffold_108840               1295 1 -      9135 a
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              16067 1 -     32273 a
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186338205 1 + 186649187 a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6935 1 -     19426 A
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12084 1 -     15286 A
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13723 1 +     18253 a
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13824 1 -     41752 A
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13661 1 -     16460 A
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242435 1 +    327341 A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 7
s Hoolock_leuconedys.ctg274                                    434879 1 +    630532 a
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45129 1 +     55795 A
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 7
s Indri_indri.k141_3655594                                   22619 1 +     31101 a
i Indri_indri.k141_3655594                               C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    16480 1 -     42476 A
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 10
s Lemur_catta.scaffold_24                                 15524176 1 -  30322482 A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7563 1 +     64341 a
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           4886 1 +      4941 a
i Leontocebus_illigeri.k141_3350179                      I 4 C 0
s Leontocebus_nigricollis.k141_4610752                        7604 1 +     35603 a
i Leontocebus_nigricollis.k141_4610752                   T 251 C 0
s Leontopithecus_chrysomelas.k141_1519602                    29271 1 +     38576 a
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         25971 1 +     66356 a
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         11070 1 -     23766 A
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29131 1 +     45836 A
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1669 1 +     25010 A
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27067 1 +     54090 A
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3043162 1 +   3914936 a
i Leptonychotes_weddellii.KB714746.1                     C 0 I 7
s Lepus_americanus.LepAme_scaffold_107385                     6576 1 -     14121 a
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 4
s Lophocebus_aterrimus.ctg367                              1437213 1 +   1826925 a
i Lophocebus_aterrimus.ctg367                            T 113 C 0
s Lycaon_pictus.CM007581.1                                17955439 1 -  59628241 N
i Lycaon_pictus.CM007581.1                               C 0 I 7
s Macaca_arctoides.k141_2326796                               7039 1 +     40492 a
i Macaca_arctoides.k141_2326796                          T 103 C 0
s Macaca_assamensis.Contig5                               59676298 1 +  60120075 a
i Macaca_assamensis.Contig5                              T 103 C 0
s Macaca_cyclopis.k119_18836                                 12811 1 -     26193 a
i Macaca_cyclopis.k119_18836                             T 106 C 0
s Macaca_fascicularis.k141_814140                            80595 1 -    114318 a
i Macaca_fascicularis.k141_814140                        T 106 C 0
s Macaca_fuscata.k119_255327                                  6286 1 -     23192 a
i Macaca_fuscata.k119_255327                             T 102 C 0
s Macaca_leonina.k141_3550399                                15755 1 -     29190 a
i Macaca_leonina.k141_3550399                            T 106 C 0
s Macaca_maura.k141_2733130                                  24320 1 +     37952 a
i Macaca_maura.k141_2733130                              T 106 C 0
s Macaca_mulatta.NC_041758.1                             186839409 1 + 187317192 a
i Macaca_mulatta.NC_041758.1                             T 106 C 0
s Macaca_nemestrina.KQ007038.1                            25457972 1 -  25927173 a
i Macaca_nemestrina.KQ007038.1                           T 106 C 0
s Macaca_nigra.k141_1655396                                  80168 1 +     89720 a
i Macaca_nigra.k141_1655396                              T 106 C 0
s Macaca_radiata.k141_3680011                                 7169 1 +     20474 a
i Macaca_radiata.k141_3680011                            T 106 C 0
s Macaca_siberu.k141_635500                                   6969 1 -     14993 a
i Macaca_siberu.k141_635500                              T 106 C 0
s Macaca_silenus.Contig273                                  329835 1 -    668171 a
i Macaca_silenus.Contig273                               T 106 C 0
s Macaca_thibetana.k99_256239                                 5285 1 -     24072 a
i Macaca_thibetana.k99_256239                            T 103 C 0
s Macaca_tonkeana.k141_1498238                               25907 1 -     45290 a
i Macaca_tonkeana.k141_1498238                           T 106 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90731 1 +     94391 G
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 4
s Mandrillus_leucophaeus.scaffold280                      23937494 1 -  24302211 a
i Mandrillus_leucophaeus.scaffold280                     T 107 C 0
s Mandrillus_sphinx.Contig270                               351622 1 +    752769 a
i Mandrillus_sphinx.Contig270                            T 103 C 0
s Manis_pentadactyla.KN006162.1                              50598 1 -    317179 a
i Manis_pentadactyla.KN006162.1                          C 0 I 7
s Megaderma_lyra.MegLyr_scaffold_4542                        10442 1 -    207569 G
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 8
s Mellivora_capensis.MelCap_flattened_line_69365             10160 1 +     13704 A
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 7
s Mico_argentatus.k141_1239457                                5820 1 -      7380 a
i Mico_argentatus.k141_1239457                           T 242 C 0
s Mico_humeralifer.k141_1976199                               4893 1 +     18990 a
i Mico_humeralifer.k141_1976199                          I 4 C 0
s Mico_schneideri.k141_1950671                                      5832 1 -      7356 a
i Mico_schneideri.k141_1950671                                 T 242 C 0
s Microcebus_murinus.CM007674.1                           18291601 1 -  93316391 a
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                15767 1 -     19307 A
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 4
s Miniopterus_natalensis.LDJU01000034.1                    1850725 1 +   8254450 a
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 9
s Miniopterus_schreibersii.MinSch_scaffold_18080             34406 1 +     64694 A
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 9
s Miopithecus_ogouensis.k141_534055                           9310 1 -     28506 a
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6030 1 -      8324 A
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 7
s Mirza_zaza.k141_952172                                      9146 1 -     37649 A
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141734 1 -    366855 A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 7
s Mungos_mungo.MunMun_flattened_line_23663                   35535 1 +     37127 A
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 7
s Murina_feae.MurFea_scaffold_85699                           6929 1 +     14753 A
i Murina_feae.MurFea_scaffold_85699                      C 0 I 12
s Mustela_putorius.JH418006.1                               301573 1 -  14710649 a
i Mustela_putorius.JH418006.1                            C 0 I 7
s Myotis_brandtii.KE162005.1                                280572 1 -  10118263 a
i Myotis_brandtii.KE162005.1                             C 0 I 12
s Myotis_davidii.KB100139.1                                1587834 1 -   6019432 a
i Myotis_davidii.KB100139.1                              C 0 I 12
s Myotis_lucifugus.GL429869.1                              3903926 1 -   4330536 a
i Myotis_lucifugus.GL429869.1                            C 0 I 12
s Myotis_myotis.MyoMyo_scaffold_281845                          78 1 +      1835 A
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 I 9
s Nasalis_larvatus.k141_413338                               15202 1 +     21681 a
i Nasalis_larvatus.k141_413338                           T 110 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20307616 1 +  31847680 a
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 7
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149507 1 -   9404916 a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 7
s Ochotona_princeps.JH802162.1                             1363636 1 +   3988456 a
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              506766 1 -   2017862 a
i Odobenus_rosmarus.KB229312.1                           C 0 I 7
s Oryctolagus_cuniculus.CM000791.1                        67147439 1 + 174332312 a
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462455 1 -    559221 a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 7
s Pan_paniscus.KQ411613.1                                    44156 1 +     80009 a
i Pan_paniscus.KQ411613.1                                T 113 C 0
s Pan_troglodytes.CM009242.2                             189143172 1 + 189151597 a
i Pan_troglodytes.CM009242.2                             I 4 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  151268 1 +    230217 A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 7
s Panthera_pardus.KV860321.1                                264477 1 +  18783137 a
i Panthera_pardus.KV860321.1                             C 0 I 7
s Panthera_tigris.KE722367.1                               4721356 1 -   8748460 a
i Panthera_tigris.KE722367.1                             C 0 I 7
s Papio_anubis.CM001495.2                                183443292 1 + 183742232 a
i Papio_anubis.CM001495.2                                T 111 C 0
s Papio_cynocephalus.k141_4307930                             6942 1 +     20448 a
i Papio_cynocephalus.k141_4307930                        T 107 C 0
s Papio_hamadryas.Contig39                                20563750 1 +  20919399 a
i Papio_hamadryas.Contig39                               T 111 C 0
s Papio_kindae.k141_1936966                                   5686 1 +     41871 a
i Papio_kindae.k141_1936966                              T 107 C 0
s Papio_papio.k141_802527                                     8971 1 +     27711 a
i Papio_papio.k141_802527                                T 115 C 0
s Papio_ursinus.k141_3428135                                  9155 1 +      9205 a
i Papio_ursinus.k141_3428135                             C 0 T 111
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12765 1 -     78924 A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 7
s Piliocolobus_badius.k141_1234363                           43697 1 +     62158 a
i Piliocolobus_badius.k141_1234363                       T 106 C 0
s Piliocolobus_gordonorum.k141_381342                        38444 1 +     89929 a
i Piliocolobus_gordonorum.k141_381342                    T 106 C 0
s Piliocolobus_kirkii.k141_448987                            39860 1 +     51399 a
i Piliocolobus_kirkii.k141_448987                        T 106 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296098 1 -  14605196 a
i Piliocolobus_tephrosceles.PDMG02000141.1               T 106 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1870 1 +     22620 A
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 11
s Pongo_abelii.CM009266.2                                189131198 1 + 189387572 a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570806 1 +   9816681 a
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               73378 1 -     81375 a
i Presbytis_comata.k141_677006                           T 110 C 0
s Presbytis_mitrata.k141_1087752                              5198 1 +     19060 a
i Presbytis_mitrata.k141_1087752                         T 110 C 0
s Prolemur_simus.MPIZ01000396.1                            2596856 1 -   4620579 a
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990837 1 +   2598838 a
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29149 1 +     38485 a
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1192 1 -     13098 A
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26670 1 +     35766 a
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4857 1 -     24134 A
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28682 1 -     67325 A
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4905 1 -      6182 A
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            15189 1 -     21811 a
i Pteronotus_parnellii.KE909381.1                        C 0 I 7
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40350 1 +     42204 A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 7
s Pteropus_alecto.KB030862.1                              22976897 1 +  28871421 a
i Pteropus_alecto.KB030862.1                             C 0 I 4
s Pteropus_vampyrus.KN534172.1                                6950 1 -      8028 g
i Pteropus_vampyrus.KN534172.1                           C 0 I 4
s Puma_concolor.QAVW01001104.1                            20274422 1 -  38429054 a
i Puma_concolor.QAVW01001104.1                           C 0 I 7
s Pygathrix_cinerea.k141_1153803                             15211 1 -     91421 a
i Pygathrix_cinerea.k141_1153803                         T 110 C 0
s Pygathrix_nigripes_b.ctg100                                 7609331 1 +   7812017 a
i Pygathrix_nigripes_b.ctg100                               T 110 C 0
s Pygathrix_nigripes_a.k141_215492                             15183 1 -     72585 a
i Pygathrix_nigripes_a.k141_215492                         T 110 C 0
s Rhinopithecus_bieti.k119_217274                             6897 1 -     11128 a
i Rhinopithecus_bieti.k119_217274                        T 107 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236250 1 - 195417433 a
i Rhinopithecus_roxellana.NC_044550.1                    T 103 C 0
s Rhinopithecus_strykeri.ctg102                            7671902 1 +   7961872 a
i Rhinopithecus_strykeri.ctg102                          T 107 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87919 1 -     96226 G
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 4
s Saguinus_bicolor.k141_8081                                   443 1 +     42994 a
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_57697                                228 1 +      1030 a
i Saguinus_imperator.k141_57697                          C 0 C 0
s Saguinus_inustus.k141_699149                               13617 1 +     13640 a
i Saguinus_inustus.k141_699149                           I 4 C 0
s Saguinus_labiatus.k141_285685                               8486 1 +      8564 a
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469336 1 + 209938924 a
i Saguinus_midas.LG03                                    T 458 C 0
s Saguinus_mystax.k141_374627                                 8042 1 -      9399 a
i Saguinus_mystax.k141_374627                            T 387 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951171 1 - 121099817 a
i Saimiri_boliviensis.NW_024100920.1                     C 0 T 283
s Saimiri_cassiquiarensis.k141_2188234                       23510 1 +     46362 a
i Saimiri_cassiquiarensis.k141_2188234                   C 0 T 166
s Saimiri_macrodon.k141_716185                               23605 1 +     45824 a
i Saimiri_macrodon.k141_716185                           C 0 T 166
s Saimiri_oerstedii.k141_1487881                             40284 1 -     64574 a
i Saimiri_oerstedii.k141_1487881                         C 0 T 217
s Saimiri_sciureus.k141_2278166                               3356 1 -     23631 a
i Saimiri_sciureus.k141_2278166                          C 0 T 283
s Saimiri_ustus.k141_1484609                                 23501 1 -     61129 a
i Saimiri_ustus.k141_1484609                             C 0 T 166
s Sapajus_apella.ctg103                                    5420701 1 -   5703754 a
i Sapajus_apella.ctg103                                  C 0 I 76
s Sapajus_macrocephalus.k141_351809                          55742 1 -     80660 a
i Sapajus_macrocephalus.k141_351809                      C 0 I 370
s Semnopithecus_entellus.k141_11662                          19720 1 -     19888 A
i Semnopithecus_entellus.k141_11662                      I 7 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26925 1 +     39453 a
i Semnopithecus_hypoleucos.k141_1615806                  T 110 C 0
s Semnopithecus_johnii.k141_670120                            7444 1 +     27826 a
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             6965 1 -     19483 a
i Semnopithecus_priam.k141_638794                        T 110 C 0
s Semnopithecus_schistaceus.k141_1572284                       272 1 -     12762 a
i Semnopithecus_schistaceus.k141_1572284                 T 104 I 104
s Semnopithecus_vetulus.k141_910252                            128 1 +     13763 a
i Semnopithecus_vetulus.k141_910252                      T 109 I 109
s Suricata_suricatta.SurSur_flattened_line_6629              18438 1 -    196729 A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 7
s Sus_scrofa.CM000828.4                                    6810880 1 +  69701581 a
i Sus_scrofa.CM000828.4                                  C 0 I 7
s Tadarida_brasiliensis.TadBra_scaffold_25820                10911 1 +     41958 A
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 12
s Tapirus_indicus.TapInd_scaffold_9301                      118878 1 -    156842 A
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 7
s Tapirus_terrestris.TapTer_scaffold_755                    387335 1 +    539355 A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 7
s Tarsius_lariang.k141_2201908                               26473 1 +     70052 a
i Tarsius_lariang.k141_2201908                           T 108 C 0
s Tarsius_wallacei.k141_254427                                1378 1 -     16117 a
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428614 1 + 186847797 a
i Theropithecus_gelada.CM009954.1                        T 107 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81308 1 +    610378 A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 7
s Trachypithecus_auratus.k141_722599                         11016 1 -     20410 a
i Trachypithecus_auratus.k141_722599                     T 110 C 0
s Trachypithecus_crepusculus.k141_582567                       130 1 -     12674 a
i Trachypithecus_crepusculus.k141_582567                 T 110 C 0
s Trachypithecus_cristatus.k141_580354                       11117 1 +     19930 a
i Trachypithecus_cristatus.k141_580354                   T 110 C 0
s Trachypithecus_francoisi.k141_1412647                       7528 1 -     19997 a
i Trachypithecus_francoisi.k141_1412647                  T 110 C 0
s Trachypithecus_geei.k141_277701                            47668 1 -     60166 a
i Trachypithecus_geei.k141_277701                        T 109 C 0
s Trachypithecus_germaini.k141_912491                        15139 1 -     27529 a
i Trachypithecus_germaini.k141_912491                    T 110 C 0
s Trachypithecus_hatinhensis.k141_143409                     15083 1 -     18194 a
i Trachypithecus_hatinhensis.k141_143409                 T 110 C 0
s Trachypithecus_laotum.k141_907409                           8795 1 -     21137 a
i Trachypithecus_laotum.k141_907409                      T 110 C 0
s Trachypithecus_leucocephalus.k141_587342                    7498 1 -     10723 a
i Trachypithecus_leucocephalus.k141_587342               T 110 C 0
s Trachypithecus_melamera.k141_434728                         6670 1 +      9834 a
i Trachypithecus_melamera.k141_434728                    T 110 C 0
s Trachypithecus_obscurus.k141_190785                        24983 1 +     32220 a
i Trachypithecus_obscurus.k141_190785                    T 110 C 0
s Trachypithecus_phayrei.ctg124                            5939085 1 +   6242583 a
i Trachypithecus_phayrei.ctg124                          T 110 C 0
s Trachypithecus_pileatus.k141_2007326                        8337 1 +     20839 a
i Trachypithecus_pileatus.k141_2007326                   T 109 C 0
s Tupaia_chinensis.KB320699.1                              2155692 1 +   4065304 g
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9345 1 -     10553 G
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4850550 1 -   5085361 a
i Ursus_maritimus.KK499267.1                             C 0 I 7
s Varecia_rubra.k141_590885                                  11521 1 +     50397 A
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11580 1 +     24756 A
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5371996 1 -   5488506 a
i Vicugna_pacos.KN270157.1                               C 0 I 7
s Vulpes_lagopus.VulLag_flattened_line_30954                 10903 1 -     43706 A
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 7
s Zalophus_californianus.ZalCal_flattened_line_17732          5479 1 +     86975 a
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 7
e Echinops_telfairi.JH980293.1                            48780689 3 + 111700974 I
e Otolemur_garnettii.GL873799.1                             696396 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         4233 0 +      8798 C
e Galago_senegalensis.k141_631886                             4403 0 +     11339 C
e Galago_moholi.ctg2040                                     426713 0 -    453645 C
e Mus_pahari.LT608297.1                                   31355125 13 -  89631738 T
e Mus_spretus.CM004101.1                                  90752527 13 - 130317789 T
e Mus_musculus.chr8                                       87650466 13 - 129401213 T
e Mus_caroli.LT608237.1                                   84361468 13 - 120012414 T
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Loris_tardigradus.ctg83                                  1004782 0 +   6120653 C
e Loris_lydekkerianus.k141_2539221                            5962 0 +     11245 C
e Perodicticus_potto.k141_1092580                             8620 0 +     25941 C
e Perodicticus_ibeanus.k141_855320                           10214 0 +     13100 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      15000 0 +     63895 C
e Xerus_inauris.XerIna_scaffold_2302                          1179 7 +    224448 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   53362 63 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4293354 3 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   6516 8 +      8208 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              105556 0 +    114563 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 72732 9 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             30850 6 +     97271 I
e Spermophilus_dauricus.KZ294078.1                         1954051 7 -   3870691 I
e Sorex_araneus.JH798187.1                                13651056 93 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               3814 63 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11982 13 -     12148 T
e Scalopus_aquaticus.ScaAqu_scaffold_662                    153257 71 -    313613 I
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570728 13 +  90668790 T
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Psammomys_obesus.NESX01036370.1                            10498 13 -     21651 T
e Procavia_capensis.ProCapCap_scaffold_85530                 13455 3 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     28235 0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18194880 13 -  18517816 T
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Orycteropus_afer.OryAfe_flattened_line_144387               9955 3 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80254 13 +    102263 T
e Ondatra_zibethicus.OndZib_scaffold_46174                   25254 13 +     28053 T
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  746966 0 +  11899542 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761680 0 + 199412804 C
e Nycticebus_coucang.k141_1127096                              250 0 +      2075 C
e Nycticebus_bengalensis.LG01                            102586326 0 - 196305487 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Nannospalax_galili.KL204047.1                            2034174 0 -   3037898 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189371 9 +    196477 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     71356 0 -     80779 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              5056 0 +     14296 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11260586 13 -  27267610 T
e Microgale_talazaci.MicTal_scaffold_6613                    22438 3 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182348 13 -  29670104 T
e Meriones_unguiculatus.MerUng_scaffold_7390                 32854 13 +    140813 T
e Marmota_marmota.CZRN01000018.1                          33103196 7 -  40650429 I
e Manis_javanica.JSZB01003497.1                              18609 4 +    737560 I
e Loxodonta_africana.GL010049.1                            4217433 3 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276904 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Ictidomys_tridecemlineatus.JH393364.1                    7520996 7 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      83223 0 +    135385 C
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                1000 3 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20662334 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32714 0 +     78134 C
e Glis_glis.GliGli_scaffold_19807                            31472 0 +     49224 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Galagoides_demidoff.k141_1711393                            1701 0 +     41679 C
e Fukomys_damarensis.KN121974.1                             850545 0 +   3816255 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3328282 71 -   7059049 I
e Ellobius_talpinus.LOJH01081419.1                             538 13 +      8657 T
e Ellobius_lutescens.LOEQ01008920.1                          20407 13 -    110024 T
e Elephantulus_edwardii.JH947257.1                         1097777 3 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    36511 0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            63648 8 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35877 0 +     51376 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    837190 0 +   1526836 C
e Crocidura_indochinensis.CroInd_scaffold_37019               3028 88 -     19598 I
e Cricetulus_griseus.LT883664.1                           11667673 13 + 224834208 T
e Cricetomys_gambianus.CriGam_scaffold_18520                 50299 0 +     63868 C
e Condylura_cristata.JH655891.1                           17548142 67 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            173497 9 +    839153 I
e Choloepus_didactylus.ChoDid_scaffold_45914                 18421 8 +     19366 I
e Chinchilla_lanigera.JH722012.1                           1252917 0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_138870             641 8 -      8501 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Castor_canadensis.CasCan_scaffold_2074                    137187 0 +    179628 C
e Capromys_pilorides.CapPil_scaffold_65020                    1169 0 -     12242 C
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e CanFam4.chr16                                           17799210 78 -  60362399 I
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Arctocebus_calabarensis.k141_2318572                       11570 0 +     14667 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      12720 0 +     20879 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74603 0 -     89534 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     70906 13 +     87051 T

a score=0.000000
s hg38.chrUn_KI270753v1                                       6927 1 +     62944 g
s Allenopithecus_nigroviridis.k141_3361533                   14754 1 -     52922 g
i Allenopithecus_nigroviridis.k141_3361533               C 0 I 103
s Allochrocebus_lhoesti.k141_4309873                         14670 1 -     28001 g
i Allochrocebus_lhoesti.k141_4309873                     C 0 I 101
s Allochrocebus_preussi.k141_1442296                          5166 1 -     18505 g
i Allochrocebus_preussi.k141_1442296                     C 0 I 103
s Allochrocebus_solatus.k141_166128                           6020 1 -     12518 g
i Allochrocebus_solatus.k141_166128                      C 0 I 101
s Alouatta_belzebul.k141_3560514                              7503 1 +     51355 g
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                 617 1 -     36483 g
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              11268 1 +     28687 g
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1509701                                24890 1 +     25266 g
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_918386                             611 1 -      9457 g
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_3472759                            18197 1 -     18578 g
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              3584 1 +     47717 g
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                               289 1 +      5663 g
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             14950 1 +     50774 g
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  15526 1 -     33861 a
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            15546 1 -     34016 a
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297943 1 -   5030052 a
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             15548 1 -     34685 a
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28672 1 -     47192 a
i Aotus_vociferans.k141_344750                           C 0 C 0
s Avahi_laniger.k141_765380                                  53794 1 -     92717 A
i Avahi_laniger.k141_765380                              C 0 I 15
s Avahi_peyrierasi.k141_1424874                              54421 1 +     85213 A
i Avahi_peyrierasi.k141_1424874                          C 0 I 10
s Callibella_humilis.k141_1278103                             5285 1 -     10423 g
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             24752 1 +     31915 g
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            5247 1 +      5267 g
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590461 1 - 189096842 g
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             11992 1 -     12001 G
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Carlito_syrichta.NW_007247396.1                           201467 1 +    308752 g
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Cebuella_niveiventris.k141_1251222                          9906 1 -     11392 g
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               6004 1 -      7577 g
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25652575 1 +  26074798 g
i Cebus_albifrons.Contig27                               I 98 C 0
s Cebus_olivaceus.k141_1764483                                 545 1 +     28840 g
i Cebus_olivaceus.k141_1764483                           I 97 C 0
s Cebus_unicolor.k141_1837183                                  271 1 +     14051 g
i Cebus_unicolor.k141_1837183                            I 107 C 0
s Cephalopachus_bancanus.k141_1423433                         5472 1 +     31688 g
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4475675 1 +   4669795 g
i Cercocebus_atys.KQ010504.1                             C 0 I 107
s Cercocebus_chrysogaster.k141_393940                        14220 1 -     19203 g
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3342297                            836 1 -     14043 g
i Cercocebus_lunulatus.k141_3342297                      C 0 I 107
s Cercocebus_torquatus.k141_3057011                           8872 1 +     27781 g
i Cercocebus_torquatus.k141_3057011                      C 0 I 104
s Cercopithecus_ascanius.k141_1024104                         9041 1 -     20310 g
i Cercopithecus_ascanius.k141_1024104                    C 0 I 103
s Cercopithecus_cephus.k141_1078548                          12020 1 +     29689 g
i Cercopithecus_cephus.k141_1078548                      C 0 I 104
s Cercopithecus_diana.k141_1150327                            6774 1 -     20078 g
i Cercopithecus_diana.k141_1150327                       C 0 I 103
s Cercopithecus_hamlyni.k141_187466                          14697 1 -     27936 g
i Cercopithecus_hamlyni.k141_187466                      C 0 I 97
s Cercopithecus_lowei.k141_1854285                            3561 1 -     17152 g
i Cercopithecus_lowei.k141_1854285                       C 0 I 103
s Cercopithecus_albogularis.ctg5                                38817100 1 +  39242232 g
i Cercopithecus_albogularis.ctg5                               C 0 I 103
s Cercopithecus_mona.ctg39                                21222792 1 -  21565898 g
i Cercopithecus_mona.ctg39                               C 0 I 103
s Cercopithecus_neglectus.k141_2526306                       39910 1 -     53127 G
i Cercopithecus_neglectus.k141_2526306                   C 0 I 103
s Cercopithecus_nictitans.k141_1119862                         161 1 +     13442 g
i Cercopithecus_nictitans.k141_1119862                   C 0 I 103
s Cercopithecus_petaurista.k141_807961                       14710 1 -     27947 g
i Cercopithecus_petaurista.k141_807961                   C 0 I 103
s Cercopithecus_pogonias.k141_822820                         14686 1 +     17596 g
i Cercopithecus_pogonias.k141_822820                     C 0 I 103
s Cercopithecus_roloway.k141_2581234                           733 1 +     14005 g
i Cercopithecus_roloway.k141_2581234                     C 0 I 103
s Cheirogaleus_major.k141_333249                             21179 1 -     52598 A
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16544 1 +     57038 a
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2206961                            208 1 -     15524 g
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18428670 1 -  18827391 g
i Chlorocebus_aethiops.ctg25                             C 0 I 103
s Chlorocebus_pygerythrus.k141_1025673                       15107 1 -     50209 g
i Chlorocebus_pygerythrus.k141_1025673                   C 0 I 103
s Chlorocebus_sabaeus.CM001947.1                         135422107 1 + 135778131 g
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 103
s Colobus_angolensis.KN981557.1                            1910616 1 +   2368649 g
i Colobus_angolensis.KN981557.1                          C 0 I 106
s Colobus_guereza.LG01                                   199948974 1 + 200372422 G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37150 1 +     84244 g
i Colobus_polykomos.k141_906115                          C 0 I 106
s Daubentonia_madagascariensis.ctg71                      12537395 1 -  12879189 A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Erythrocebus_patas.Contig38                             21205277 1 -  21539334 g
i Erythrocebus_patas.Contig38                            C 0 I 101
s Eulemur_albifrons.k141_342033                              13891 1 -     14127 A
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6605 1 -     16928 A
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15629 1 -     25546 A
i Eulemur_coronatus.k141_885031                          C 0 I 8
s Eulemur_flavifrons.k141_1184614                            12833 1 +     26330 a
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14068 1 +     23973 A
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12830 1 +     75513 a
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10760 1 +     97555 a
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              251 1 +     13026 a
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4304 1 -     17153 A
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13877 1 +    111500 A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1296 1 -      9135 a
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              16068 1 -     32273 g
i Gorilla_beringei.k141_3596273                          C 0 I 2
s Gorilla_gorilla.LT578341.1                             186338206 1 + 186649187 g
i Gorilla_gorilla.LT578341.1                             C 0 I 2
s Hapalemur_alaotrensis.k141_170648                           6936 1 -     19426 A
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12085 1 -     15286 A
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13724 1 +     18253 a
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13825 1 -     41752 A
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13662 1 -     16460 A
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Hoolock_leuconedys.ctg274                                    434880 1 +    630532 g
i Hoolock_leuconedys.ctg274                                 C 0 I 2
s Indri_indri.k141_3655594                                   22620 1 +     31101 a
i Indri_indri.k141_3655594                               C 0 I 5
s Lemur_catta.scaffold_24                                 15524177 1 -  30322482 A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7564 1 +     64341 g
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           4887 1 +      4941 g
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        7605 1 +     35603 g
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    29272 1 +     38576 g
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         25972 1 +     66356 g
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         11071 1 -     23766 A
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29132 1 +     45836 A
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1670 1 +     25010 A
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27068 1 +     54090 A
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437214 1 +   1826925 g
i Lophocebus_aterrimus.ctg367                            C 0 I 113
s Macaca_arctoides.k141_2326796                               7040 1 +     40492 g
i Macaca_arctoides.k141_2326796                          C 0 I 103
s Macaca_assamensis.Contig5                               59676299 1 +  60120075 g
i Macaca_assamensis.Contig5                              C 0 I 103
s Macaca_cyclopis.k119_18836                                 12812 1 -     26193 G
i Macaca_cyclopis.k119_18836                             C 0 I 106
s Macaca_fascicularis.k141_814140                            80596 1 -    114318 g
i Macaca_fascicularis.k141_814140                        C 0 I 106
s Macaca_fuscata.k119_255327                                  6287 1 -     23192 g
i Macaca_fuscata.k119_255327                             C 0 I 102
s Macaca_leonina.k141_3550399                                15756 1 -     29190 g
i Macaca_leonina.k141_3550399                            C 0 I 106
s Macaca_maura.k141_2733130                                  24321 1 +     37952 g
i Macaca_maura.k141_2733130                              C 0 I 106
s Macaca_mulatta.NC_041758.1                             186839410 1 + 187317192 g
i Macaca_mulatta.NC_041758.1                             C 0 I 106
s Macaca_nemestrina.KQ007038.1                            25457973 1 -  25927173 g
i Macaca_nemestrina.KQ007038.1                           C 0 I 106
s Macaca_nigra.k141_1655396                                  80169 1 +     89720 g
i Macaca_nigra.k141_1655396                              C 0 I 106
s Macaca_radiata.k141_3680011                                 7170 1 +     20474 g
i Macaca_radiata.k141_3680011                            C 0 I 106
s Macaca_siberu.k141_635500                                   6970 1 -     14993 g
i Macaca_siberu.k141_635500                              C 0 I 106
s Macaca_silenus.Contig273                                  329836 1 -    668171 g
i Macaca_silenus.Contig273                               C 0 I 106
s Macaca_thibetana.k99_256239                                 5286 1 -     24072 g
i Macaca_thibetana.k99_256239                            C 0 I 103
s Macaca_tonkeana.k141_1498238                               25908 1 -     45290 g
i Macaca_tonkeana.k141_1498238                           C 0 I 106
s Mandrillus_leucophaeus.scaffold280                      23937495 1 -  24302211 g
i Mandrillus_leucophaeus.scaffold280                     C 0 I 107
s Mandrillus_sphinx.Contig270                               351623 1 +    752769 g
i Mandrillus_sphinx.Contig270                            C 0 I 103
s Mico_argentatus.k141_1239457                                5821 1 -      7380 g
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               4894 1 +     18990 g
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      5833 1 -      7356 g
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18291602 1 -  93316391 a
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9311 1 -     28506 g
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirza_zaza.k141_952172                                      9147 1 -     37649 A
i Mirza_zaza.k141_952172                                 C 0 C 0
s Nasalis_larvatus.k141_413338                               15203 1 +     21681 g
i Nasalis_larvatus.k141_413338                           C 0 I 110
s Pan_paniscus.KQ411613.1                                    44157 1 +     80009 g
i Pan_paniscus.KQ411613.1                                C 0 I 2
s Pan_troglodytes.CM009242.2                             189143173 1 + 189151597 g
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                183443293 1 + 183742232 g
i Papio_anubis.CM001495.2                                C 0 I 111
s Papio_cynocephalus.k141_4307930                             6943 1 +     20448 g
i Papio_cynocephalus.k141_4307930                        C 0 I 107
s Papio_hamadryas.Contig39                                20563751 1 +  20919399 g
i Papio_hamadryas.Contig39                               C 0 I 111
s Papio_kindae.k141_1936966                                   5687 1 +     41871 g
i Papio_kindae.k141_1936966                              C 0 I 107
s Papio_papio.k141_802527                                     8972 1 +     27711 g
i Papio_papio.k141_802527                                C 0 I 115
s Papio_ursinus.k141_3428135                                  9045 1 +      9205 g
i Papio_ursinus.k141_3428135                             T 111 I 111
s Piliocolobus_badius.k141_1234363                           43698 1 +     62158 g
i Piliocolobus_badius.k141_1234363                       C 0 I 106
s Piliocolobus_gordonorum.k141_381342                        38445 1 +     89929 g
i Piliocolobus_gordonorum.k141_381342                    C 0 I 106
s Piliocolobus_kirkii.k141_448987                            39861 1 +     51399 g
i Piliocolobus_kirkii.k141_448987                        C 0 I 106
s Piliocolobus_tephrosceles.PDMG02000141.1                14296099 1 -  14605196 g
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 106
s Pongo_abelii.CM009266.2                                189131199 1 + 189387572 g
i Pongo_abelii.CM009266.2                                C 0 I 2
s Pongo_pygmaeus.ctg66                                     9570807 1 +   9816681 g
i Pongo_pygmaeus.ctg66                                   C 0 I 2
s Presbytis_comata.k141_677006                               73379 1 -     81375 g
i Presbytis_comata.k141_677006                           C 0 I 110
s Presbytis_mitrata.k141_1087752                              5199 1 +     19060 g
i Presbytis_mitrata.k141_1087752                         C 0 I 110
s Prolemur_simus.MPIZ01000396.1                            2596857 1 -   4620579 a
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990838 1 +   2598838 a
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 5
s Propithecus_coronatus.k141_347390                          29150 1 +     38485 a
i Propithecus_coronatus.k141_347390                      C 0 I 5
s Propithecus_diadema.k141_58108                              1193 1 -     13098 A
i Propithecus_diadema.k141_58108                         C 0 I 5
s Propithecus_edwardsi.k141_1176054                          26671 1 +     35766 a
i Propithecus_edwardsi.k141_1176054                      C 0 I 5
s Propithecus_perrieri.k141_1200571                           4858 1 -     24134 A
i Propithecus_perrieri.k141_1200571                      C 0 I 5
s Propithecus_tattersalli.k141_790011                        28683 1 -     67325 A
i Propithecus_tattersalli.k141_790011                    C 0 I 5
s Propithecus_verreauxi.k141_956661                           4906 1 -      6182 A
i Propithecus_verreauxi.k141_956661                      C 0 I 5
s Pygathrix_cinerea.k141_1153803                             15212 1 -     91421 g
i Pygathrix_cinerea.k141_1153803                         C 0 I 110
s Pygathrix_nigripes_b.ctg100                                 7609332 1 +   7812017 g
i Pygathrix_nigripes_b.ctg100                               C 0 I 110
s Pygathrix_nigripes_a.k141_215492                             15184 1 -     72585 g
i Pygathrix_nigripes_a.k141_215492                         C 0 I 110
s Rhinopithecus_bieti.k119_217274                             6898 1 -     11128 g
i Rhinopithecus_bieti.k119_217274                        C 0 I 107
s Rhinopithecus_roxellana.NC_044550.1                     91236251 1 - 195417433 g
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 103
s Rhinopithecus_strykeri.ctg102                            7671903 1 +   7961872 g
i Rhinopithecus_strykeri.ctg102                          C 0 I 107
s Saguinus_bicolor.k141_8081                                   444 1 +     42994 g
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_57697                                229 1 +      1030 g
i Saguinus_imperator.k141_57697                          C 0 C 0
s Saguinus_inustus.k141_699149                               13618 1 +     13640 g
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               8487 1 +      8564 g
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469337 1 + 209938924 g
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 8043 1 -      9399 g
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119950889 1 - 121099817 g
i Saimiri_boliviensis.NW_024100920.1                     T 283 I 283
s Saimiri_cassiquiarensis.k141_2188234                       23345 1 +     46362 g
i Saimiri_cassiquiarensis.k141_2188234                   T 166 I 166
s Saimiri_macrodon.k141_716185                               23440 1 +     45824 g
i Saimiri_macrodon.k141_716185                           T 166 I 166
s Saimiri_oerstedii.k141_1487881                             40068 1 -     64574 g
i Saimiri_oerstedii.k141_1487881                         T 217 I 217
s Saimiri_sciureus.k141_2278166                               3074 1 -     23631 g
i Saimiri_sciureus.k141_2278166                          T 283 I 283
s Saimiri_ustus.k141_1484609                                 23336 1 -     61129 g
i Saimiri_ustus.k141_1484609                             T 166 I 166
s Sapajus_macrocephalus.k141_351809                          56113 1 -     80660 g
i Sapajus_macrocephalus.k141_351809                      I 370 C 0
s Semnopithecus_entellus.k141_11662                          19721 1 -     19888 G
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26926 1 +     39453 g
i Semnopithecus_hypoleucos.k141_1615806                  C 0 I 110
s Semnopithecus_johnii.k141_670120                            7445 1 +     27826 g
i Semnopithecus_johnii.k141_670120                       C 0 I 109
s Semnopithecus_priam.k141_638794                             6966 1 -     19483 g
i Semnopithecus_priam.k141_638794                        C 0 I 110
s Semnopithecus_schistaceus.k141_1572284                       377 1 -     12762 G
i Semnopithecus_schistaceus.k141_1572284                 I 104 C 0
s Semnopithecus_vetulus.k141_910252                            238 1 +     13763 g
i Semnopithecus_vetulus.k141_910252                      I 109 C 0
s Tarsius_lariang.k141_2201908                               26474 1 +     70052 g
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1379 1 -     16117 g
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428615 1 + 186847797 g
i Theropithecus_gelada.CM009954.1                        C 0 I 107
s Trachypithecus_auratus.k141_722599                         11017 1 -     20410 g
i Trachypithecus_auratus.k141_722599                     C 0 I 110
s Trachypithecus_crepusculus.k141_582567                       131 1 -     12674 g
i Trachypithecus_crepusculus.k141_582567                 C 0 I 110
s Trachypithecus_cristatus.k141_580354                       11118 1 +     19930 g
i Trachypithecus_cristatus.k141_580354                   C 0 I 110
s Trachypithecus_francoisi.k141_1412647                       7529 1 -     19997 g
i Trachypithecus_francoisi.k141_1412647                  C 0 I 110
s Trachypithecus_geei.k141_277701                            47669 1 -     60166 g
i Trachypithecus_geei.k141_277701                        C 0 I 109
s Trachypithecus_germaini.k141_912491                        15140 1 -     27529 g
i Trachypithecus_germaini.k141_912491                    C 0 I 110
s Trachypithecus_hatinhensis.k141_143409                     15084 1 -     18194 g
i Trachypithecus_hatinhensis.k141_143409                 C 0 I 110
s Trachypithecus_laotum.k141_907409                           8796 1 -     21137 g
i Trachypithecus_laotum.k141_907409                      C 0 I 110
s Trachypithecus_leucocephalus.k141_587342                    7499 1 -     10723 g
i Trachypithecus_leucocephalus.k141_587342               C 0 I 110
s Trachypithecus_melamera.k141_434728                         6671 1 +      9834 g
i Trachypithecus_melamera.k141_434728                    C 0 I 110
s Trachypithecus_obscurus.k141_190785                        24984 1 +     32220 g
i Trachypithecus_obscurus.k141_190785                    C 0 I 110
s Trachypithecus_phayrei.ctg124                            5939086 1 +   6242583 g
i Trachypithecus_phayrei.ctg124                          C 0 I 110
s Trachypithecus_pileatus.k141_2007326                        8338 1 +     20839 g
i Trachypithecus_pileatus.k141_2007326                   C 0 I 109
s Tupaia_chinensis.KB320699.1                              2155693 1 +   4065304 a
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9346 1 -     10553 A
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Varecia_rubra.k141_590885                                  11522 1 +     50397 A
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11581 1 +     24756 A
i Varecia_variegata.k141_1128296                         C 0 C 0
e Echinops_telfairi.JH980293.1                            48780689 3 + 111700974 I
e Otolemur_garnettii.GL873799.1                             696396 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         4233 0 +      8798 C
e Galago_senegalensis.k141_631886                             4403 0 +     11339 C
e Galago_moholi.ctg2040                                     426713 0 -    453645 C
e Sapajus_apella.ctg103                                    5420702 76 -   5703754 I
e Mus_pahari.LT608297.1                                   31355125 13 -  89631738 T
e Mus_spretus.CM004101.1                                  90752527 13 - 130317789 T
e Mus_musculus.chr8                                       87650466 13 - 129401213 T
e Mus_caroli.LT608237.1                                   84361468 13 - 120012414 T
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Loris_tardigradus.ctg83                                  1004782 0 +   6120653 C
e Loris_lydekkerianus.k141_2539221                            5962 0 +     11245 C
e Perodicticus_potto.k141_1092580                             8620 0 +     25941 C
e Perodicticus_ibeanus.k141_855320                           10214 0 +     13100 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      15000 0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5480 7 +     86975 I
e Xerus_inauris.XerIna_scaffold_2302                          1179 7 +    224448 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 10904 7 -     43706 I
e Vicugna_pacos.KN270157.1                                 5371997 7 -   5488506 I
e Ursus_maritimus.KK499267.1                               4850551 7 -   5085361 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   53362 63 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4293354 3 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     81309 7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   6516 8 +      8208 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              105556 0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    387336 7 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      118879 7 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 72732 9 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                10912 12 +     41958 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6810881 7 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629              18439 7 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             30850 6 +     97271 I
e Spermophilus_dauricus.KZ294078.1                         1954051 7 -   3870691 I
e Sorex_araneus.JH798187.1                                13651056 93 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               3814 63 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11982 13 -     12148 T
e Scalopus_aquaticus.ScaAqu_scaffold_662                    153257 71 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                87920 4 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570728 13 +  90668790 T
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20274423 7 -  38429054 I
e Pteropus_vampyrus.KN534172.1                                6951 4 -      8028 I
e Pteropus_alecto.KB030862.1                              22976898 4 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         40351 7 +     42204 I
e Pteronotus_parnellii.KE909381.1                            15190 7 -     21811 I
e Psammomys_obesus.NESX01036370.1                            10498 13 -     21651 T
e Procavia_capensis.ProCapCap_scaffold_85530                 13455 3 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             1871 11 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     28235 0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18194880 13 -  18517816 T
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12766 7 -     78924 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4721357 7 -   8748460 I
e Panthera_pardus.KV860321.1                                264478 7 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  151269 7 +    230217 I
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       462456 7 -    559221 I
e Oryctolagus_cuniculus.CM000791.1                        67147440 0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               9955 3 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80254 13 +    102263 T
e Ondatra_zibethicus.OndZib_scaffold_46174                   25254 13 +     28053 T
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              506767 7 -   2017862 I
e Octodon_degus.JH651603.1                                  746966 0 +  11899542 C
e Ochotona_princeps.JH802162.1                             1363637 0 +   3988456 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761680 0 + 199412804 C
e Nycticebus_coucang.k141_1127096                              250 0 +      2075 C
e Nycticebus_bengalensis.LG01                            102586326 0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9149508 7 -   9404916 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20307617 7 +  31847680 I
e Nannospalax_galili.KL204047.1                            2034174 0 -   3037898 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189371 9 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_281845                          79 9 +      1835 I
e Myotis_lucifugus.GL429869.1                              3903927 12 -   4330536 I
e Myotis_davidii.KB100139.1                                1587835 12 -   6019432 I
e Myotis_brandtii.KE162005.1                                280573 12 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     71356 0 -     80779 C
e Mustela_putorius.JH418006.1                               301574 7 -  14710649 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5056 0 +     14296 C
e Murina_feae.MurFea_scaffold_85699                           6930 12 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   35536 7 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 141735 7 -    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         6031 7 -      8324 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             34407 9 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1850726 9 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11260586 13 -  27267610 T
e Micronycteris_hirsuta.MicHir_scaffold_52381                15768 4 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    22438 3 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182348 13 -  29670104 T
e Meriones_unguiculatus.MerUng_scaffold_7390                 32854 13 +    140813 T
e Mellivora_capensis.MelCap_flattened_line_69365             10161 7 +     13704 I
e Megaderma_lyra.MegLyr_scaffold_4542                        10443 8 -    207569 I
e Marmota_marmota.CZRN01000018.1                          33103196 7 -  40650429 I
e Manis_pentadactyla.KN006162.1                              50599 7 -    317179 I
e Manis_javanica.JSZB01003497.1                              18609 4 +    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_8222                 90732 4 +     94391 I
e Lycaon_pictus.CM007581.1                                17955440 7 -  59628241 I
e Loxodonta_africana.GL010049.1                            4217433 3 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     6577 4 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3043163 7 +   3914936 I
e Lasiurus_borealis.LasBor_scaffold_32767                    16481 10 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276904 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Ictidomys_tridecemlineatus.JH393364.1                    7520996 7 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      83223 0 +    135385 C
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  45130 7 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                1000 3 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20662334 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               242436 7 +    327341 I
e Graphiurus_murinus.GraMur_scaffold_10447                   32714 0 +     78134 C
e Glis_glis.GliGli_scaffold_19807                            31472 0 +     49224 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Galagoides_demidoff.k141_1711393                            1701 0 +     41679 C
e Fukomys_damarensis.KN121974.1                             850545 0 +   3816255 C
e Felis_nigripes.FelNig_flattened_line_20823                  9654 7 -     36744 I
e Felis_catus_fca126.CM031415.1                           20195910 7 + 205367284 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3328282 71 -   7059049 I
e Equus_przewalskii.KK951119.1                               33514 8 +    498745 I
e Equus_caballus.CM000403.2                               18531485 8 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1283665 8 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2145833 13 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16329424 7 -  41312741 I
e Ellobius_talpinus.LOJH01081419.1                             538 13 +      8657 T
e Ellobius_lutescens.LOEQ01008920.1                          20407 13 -    110024 T
e Elephantulus_edwardii.JH947257.1                         1097777 3 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Eidolon_helvum.KE759718.1                                  10639 4 +     11740 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    36511 0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    6163 8 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  673411 8 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8630236 7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            63648 8 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35877 0 +     51376 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    837190 0 +   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129             28603 7 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_37019               3028 88 -     19598 I
e Cricetulus_griseus.LT883664.1                           11667673 13 + 224834208 T
e Cricetomys_gambianus.CriGam_scaffold_18520                 50299 0 +     63868 C
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          14522 4 -     20389 I
e Condylura_cristata.JH655891.1                           17548142 67 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            173497 9 +    839153 I
e Choloepus_didactylus.ChoDid_scaffold_45914                 18421 8 +     19366 I
e Chinchilla_lanigera.JH722012.1                           1252917 0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_138870             641 8 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2587 8 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     93134 7 +    217609 I
e Castor_canadensis.CasCan_scaffold_2074                    137187 0 +    179628 C
e Carollia_perspicillata.CarPer_scaffold_92756                5224 2 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                    1169 0 -     12242 C
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18500501 7 +  63665305 I
e Canis_lupus_familiaris.chr16                            17958989 218 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9034724 7 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    185338 0 -    185531 I
e CanFam4.chr16                                           17799210 78 -  60362399 I
e Camelus_ferus.KB017975.1                                  403239 7 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2334955 7 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10002497 7 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  4870 7 +     43469 I
e Arctocebus_calabarensis.k141_2318572                       11570 0 +     14667 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      12720 0 +     20879 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      185462 7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74603 0 -     89534 C
e Ailurus_fulgens.LNAC01001112.1                             79466 7 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9510690 7 -  29979442 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     70906 13 +     87051 T
e Acinonyx_jubatus.LLWD01001279.1                           827416 7 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       6928 1 +     62944 g
s Allenopithecus_nigroviridis.k141_3361533                   14858 1 -     52922 g
i Allenopithecus_nigroviridis.k141_3361533               I 103 T 104
s Allochrocebus_lhoesti.k141_4309873                         14772 1 -     28001 g
i Allochrocebus_lhoesti.k141_4309873                     I 101 T 102
s Allochrocebus_preussi.k141_1442296                          5270 1 -     18505 g
i Allochrocebus_preussi.k141_1442296                     I 103 T 104
s Allochrocebus_solatus.k141_166128                           6122 1 -     12518 g
i Allochrocebus_solatus.k141_166128                      I 101 T 102
s Alouatta_belzebul.k141_3560514                              7504 1 +     51355 g
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                 618 1 -     36483 g
i Alouatta_caraya.k141_1701091                           C 0 I 202
s Alouatta_discolor.k141_566626                              11269 1 +     28687 g
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1509701                                24891 1 +     25266 g
i Alouatta_juara.k141_1509701                            C 0 I 205
s Alouatta_macconnelli.k141_918386                             612 1 -      9457 g
i Alouatta_macconnelli.k141_918386                       C 0 I 205
s Alouatta_nigerrima.k141_3472759                            18198 1 -     18578 g
i Alouatta_nigerrima.k141_3472759                        C 0 I 205
s Alouatta_palliata.k141_2135620                              3585 1 +     47717 g
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                               290 1 +      5663 g
i Alouatta_puruensis.k141_362188                         C 0 I 209
s Alouatta_seniculus.k141_117119                             14951 1 +     50774 g
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  15527 1 -     33861 g
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            15547 1 -     34016 g
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297944 1 -   5030052 g
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             15549 1 -     34685 g
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28673 1 -     47192 g
i Aotus_vociferans.k141_344750                           C 0 C 0
s Callibella_humilis.k141_1278103                             5286 1 -     10423 g
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             24753 1 +     31915 g
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            5248 1 +      5267 g
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590462 1 - 189096842 g
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             11993 1 -     12001 G
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Carlito_syrichta.NW_007247396.1                           201468 1 +    308752 g
i Carlito_syrichta.NW_007247396.1                        C 0 I 1
s Cebuella_niveiventris.k141_1251222                          9907 1 -     11392 g
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               6005 1 -      7577 g
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25652576 1 +  26074798 g
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                 546 1 +     28840 g
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                  272 1 +     14051 g
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         5473 1 +     31688 g
i Cephalopachus_bancanus.k141_1423433                    C 0 I 117
s Cercocebus_atys.KQ010504.1                               4475783 1 +   4669795 g
i Cercocebus_atys.KQ010504.1                             I 107 T 108
s Cercocebus_chrysogaster.k141_1540778                         287 1 +     17872 g
i Cercocebus_chrysogaster.k141_1540778                   I 2 I 14
s Cercocebus_lunulatus.k141_3342297                            944 1 -     14043 g
i Cercocebus_lunulatus.k141_3342297                      I 107 T 108
s Cercocebus_torquatus.k141_3057011                           8977 1 +     27781 g
i Cercocebus_torquatus.k141_3057011                      I 104 T 105
s Cercopithecus_ascanius.k141_1024104                         9145 1 -     20310 g
i Cercopithecus_ascanius.k141_1024104                    I 103 T 104
s Cercopithecus_cephus.k141_1078548                          12125 1 +     29689 g
i Cercopithecus_cephus.k141_1078548                      I 104 T 105
s Cercopithecus_diana.k141_1150327                            6878 1 -     20078 g
i Cercopithecus_diana.k141_1150327                       I 103 T 104
s Cercopithecus_hamlyni.k141_187466                          14795 1 -     27936 g
i Cercopithecus_hamlyni.k141_187466                      I 97 T 98
s Cercopithecus_lowei.k141_1854285                            3665 1 -     17152 g
i Cercopithecus_lowei.k141_1854285                       I 103 T 104
s Cercopithecus_albogularis.ctg5                                38817204 1 +  39242232 g
i Cercopithecus_albogularis.ctg5                               I 103 T 104
s Cercopithecus_mona.ctg39                                21222896 1 -  21565898 g
i Cercopithecus_mona.ctg39                               I 103 T 104
s Cercopithecus_neglectus.k141_2526306                       40014 1 -     53127 g
i Cercopithecus_neglectus.k141_2526306                   I 103 T 104
s Cercopithecus_nictitans.k141_1119862                         265 1 +     13442 g
i Cercopithecus_nictitans.k141_1119862                   I 103 T 104
s Cercopithecus_petaurista.k141_807961                       14814 1 -     27947 g
i Cercopithecus_petaurista.k141_807961                   I 103 T 104
s Cercopithecus_pogonias.k141_822820                         14790 1 +     17596 g
i Cercopithecus_pogonias.k141_822820                     I 103 T 104
s Cercopithecus_roloway.k141_2581234                           837 1 +     14005 g
i Cercopithecus_roloway.k141_2581234                     I 103 T 104
s Chiropotes_albinasus.k141_2206961                            209 1 -     15524 g
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18428774 1 -  18827391 g
i Chlorocebus_aethiops.ctg25                             I 103 T 104
s Chlorocebus_pygerythrus.k141_1025673                       15211 1 -     50209 g
i Chlorocebus_pygerythrus.k141_1025673                   I 103 T 104
s Chlorocebus_sabaeus.CM001947.1                         135422211 1 + 135778131 g
i Chlorocebus_sabaeus.CM001947.1                         I 103 T 104
s Colobus_angolensis.KN981557.1                            1910723 1 +   2368649 g
i Colobus_angolensis.KN981557.1                          I 106 T 107
s Colobus_guereza.LG01                                   199948975 1 + 200372422 G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37257 1 +     84244 g
i Colobus_polykomos.k141_906115                          I 106 T 107
s Daubentonia_madagascariensis.ctg71                      12537396 1 -  12879189 G
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Erythrocebus_patas.Contig38                             21205379 1 -  21539334 g
i Erythrocebus_patas.Contig38                            I 101 T 102
s Galeopterus_variegatus.GalVar_scaffold_108840               1297 1 -      9135 g
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              16071 1 -     32273 g
i Gorilla_beringei.k141_3596273                          I 2 C 0
s Gorilla_gorilla.LT578341.1                             186338209 1 + 186649187 g
i Gorilla_gorilla.LT578341.1                             I 2 C 0
s Hoolock_leuconedys.ctg274                                    434883 1 +    630532 g
i Hoolock_leuconedys.ctg274                                 I 2 C 0
s Leontocebus_fuscicollis.k141_1820339                        7565 1 +     64341 g
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           4888 1 +      4941 g
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        7606 1 +     35603 g
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    29273 1 +     38576 g
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         25973 1 +     66356 g
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6581 1 -     14121 g
i Lepus_americanus.LepAme_scaffold_107385                I 4 C 0
s Lophocebus_aterrimus.ctg367                              1437328 1 +   1826925 g
i Lophocebus_aterrimus.ctg367                            I 113 T 114
s Macaca_arctoides.k141_2326796                               7144 1 +     40492 g
i Macaca_arctoides.k141_2326796                          I 103 T 104
s Macaca_assamensis.Contig5                               59676403 1 +  60120075 g
i Macaca_assamensis.Contig5                              I 103 T 104
s Macaca_cyclopis.k119_18836                                 12919 1 -     26193 g
i Macaca_cyclopis.k119_18836                             I 106 T 107
s Macaca_fascicularis.k141_814140                            80703 1 -    114318 g
i Macaca_fascicularis.k141_814140                        I 106 T 107
s Macaca_fuscata.k119_255327                                  6390 1 -     23192 g
i Macaca_fuscata.k119_255327                             I 102 T 103
s Macaca_leonina.k141_3550399                                15863 1 -     29190 g
i Macaca_leonina.k141_3550399                            I 106 T 107
s Macaca_maura.k141_2733130                                  24428 1 +     37952 g
i Macaca_maura.k141_2733130                              I 106 T 107
s Macaca_mulatta.NC_041758.1                             186839517 1 + 187317192 g
i Macaca_mulatta.NC_041758.1                             I 106 T 107
s Macaca_nemestrina.KQ007038.1                            25458080 1 -  25927173 g
i Macaca_nemestrina.KQ007038.1                           I 106 T 107
s Macaca_nigra.k141_1655396                                  80276 1 +     89720 g
i Macaca_nigra.k141_1655396                              I 106 T 107
s Macaca_radiata.k141_3680011                                 7277 1 +     20474 g
i Macaca_radiata.k141_3680011                            I 106 T 107
s Macaca_siberu.k141_635500                                   7077 1 -     14993 g
i Macaca_siberu.k141_635500                              I 106 T 107
s Macaca_silenus.Contig273                                  329943 1 -    668171 g
i Macaca_silenus.Contig273                               I 106 T 107
s Macaca_thibetana.k99_256239                                 5390 1 -     24072 g
i Macaca_thibetana.k99_256239                            I 103 T 104
s Macaca_tonkeana.k141_1498238                               26015 1 -     45290 g
i Macaca_tonkeana.k141_1498238                           I 106 T 107
s Mandrillus_leucophaeus.scaffold280                      23937603 1 -  24302211 g
i Mandrillus_leucophaeus.scaffold280                     I 107 T 108
s Mandrillus_sphinx.Contig270                               351727 1 +    752769 g
i Mandrillus_sphinx.Contig270                            I 103 C 0
s Mico_argentatus.k141_1239457                                5822 1 -      7380 g
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               4895 1 +     18990 g
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      5834 1 -      7356 g
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9312 1 -     28506 g
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Nasalis_larvatus.k141_413338                               15314 1 +     21681 a
i Nasalis_larvatus.k141_413338                           I 110 T 111
s Ochotona_princeps.JH802162.1                             1363637 1 +   3988456 g
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147440 1 + 174332312 g
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Pan_paniscus.KQ411613.1                                    44160 1 +     80009 g
i Pan_paniscus.KQ411613.1                                I 2 C 0
s Pan_troglodytes.CM009242.2                             189143174 1 + 189151597 g
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                183443405 1 + 183742232 g
i Papio_anubis.CM001495.2                                I 111 T 112
s Papio_cynocephalus.k141_4307930                             7051 1 +     20448 g
i Papio_cynocephalus.k141_4307930                        I 107 T 108
s Papio_hamadryas.Contig39                                20563863 1 +  20919399 g
i Papio_hamadryas.Contig39                               I 111 T 112
s Papio_kindae.k141_1936966                                   5795 1 +     41871 g
i Papio_kindae.k141_1936966                              I 107 T 108
s Papio_papio.k141_802527                                     9088 1 +     27711 g
i Papio_papio.k141_802527                                I 115 T 116
s Papio_ursinus.k141_3428135                                  9157 1 +      9205 g
i Papio_ursinus.k141_3428135                             I 111 T 112
s Piliocolobus_badius.k141_1234363                           43805 1 +     62158 t
i Piliocolobus_badius.k141_1234363                       I 106 T 107
s Piliocolobus_gordonorum.k141_381342                        38552 1 +     89929 T
i Piliocolobus_gordonorum.k141_381342                    I 106 T 107
s Piliocolobus_kirkii.k141_448987                            39968 1 +     51399 T
i Piliocolobus_kirkii.k141_448987                        I 106 T 107
s Piliocolobus_tephrosceles.PDMG02000141.1                14296206 1 -  14605196 t
i Piliocolobus_tephrosceles.PDMG02000141.1               I 106 T 107
s Pongo_abelii.CM009266.2                                189131202 1 + 189387572 g
i Pongo_abelii.CM009266.2                                I 2 C 0
s Pongo_pygmaeus.ctg66                                     9570810 1 +   9816681 g
i Pongo_pygmaeus.ctg66                                   I 2 C 0
s Presbytis_comata.k141_677006                               73490 1 -     81375 a
i Presbytis_comata.k141_677006                           I 110 T 111
s Presbytis_mitrata.k141_1087752                              5310 1 +     19060 a
i Presbytis_mitrata.k141_1087752                         I 110 T 111
s Pygathrix_cinerea.k141_1153803                             15323 1 -     91421 a
i Pygathrix_cinerea.k141_1153803                         I 110 T 111
s Pygathrix_nigripes_b.ctg100                                 7609443 1 +   7812017 a
i Pygathrix_nigripes_b.ctg100                               I 110 T 111
s Pygathrix_nigripes_a.k141_215492                             15295 1 -     72585 a
i Pygathrix_nigripes_a.k141_215492                         I 110 T 111
s Rhinopithecus_bieti.k119_217274                             7006 1 -     11128 a
i Rhinopithecus_bieti.k119_217274                        I 107 T 108
s Rhinopithecus_roxellana.NC_044550.1                     91236355 1 - 195417433 a
i Rhinopithecus_roxellana.NC_044550.1                    I 103 T 104
s Rhinopithecus_strykeri.ctg102                            7672011 1 +   7961872 a
i Rhinopithecus_strykeri.ctg102                          I 107 T 108
s Saguinus_bicolor.k141_8081                                   445 1 +     42994 g
i Saguinus_bicolor.k141_8081                             C 0 T 225
s Saguinus_imperator.k141_57697                                230 1 +      1030 g
i Saguinus_imperator.k141_57697                          C 0 C 0
s Saguinus_inustus.k141_699149                               13619 1 +     13640 g
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               8488 1 +      8564 g
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469338 1 + 209938924 g
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 8044 1 -      9399 g
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951173 1 - 121099817 g
i Saimiri_boliviensis.NW_024100920.1                     I 283 T 283
s Saimiri_cassiquiarensis.k141_2188234                       23512 1 +     46362 g
i Saimiri_cassiquiarensis.k141_2188234                   I 166 T 166
s Saimiri_macrodon.k141_716185                               23607 1 +     45824 g
i Saimiri_macrodon.k141_716185                           I 166 T 166
s Saimiri_oerstedii.k141_1487881                             40286 1 -     64574 g
i Saimiri_oerstedii.k141_1487881                         I 217 T 217
s Saimiri_sciureus.k141_2278166                               3358 1 -     23631 g
i Saimiri_sciureus.k141_2278166                          I 283 T 283
s Saimiri_ustus.k141_1484609                                 23503 1 -     61129 g
i Saimiri_ustus.k141_1484609                             I 166 T 166
s Sapajus_macrocephalus.k141_351809                          56114 1 -     80660 g
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Semnopithecus_entellus.k141_1672505                          187 1 -     12572 A
i Semnopithecus_entellus.k141_1672505                    I 2 I 10
s Semnopithecus_hypoleucos.k141_1615806                      27037 1 +     39453 a
i Semnopithecus_hypoleucos.k141_1615806                  I 110 T 111
s Semnopithecus_johnii.k141_670120                            7555 1 +     27826 a
i Semnopithecus_johnii.k141_670120                       I 109 T 110
s Semnopithecus_priam.k141_638794                             7077 1 -     19483 a
i Semnopithecus_priam.k141_638794                        I 110 T 111
s Semnopithecus_schistaceus.k141_1572284                       378 1 -     12762 A
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                            239 1 +     13763 a
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Tarsius_lariang.k141_2201908                               26475 1 +     70052 g
i Tarsius_lariang.k141_2201908                           C 0 I 108
s Tarsius_wallacei.k141_254427                                1380 1 -     16117 g
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428723 1 + 186847797 g
i Theropithecus_gelada.CM009954.1                        I 107 T 108
s Trachypithecus_auratus.k141_722599                         11128 1 -     20410 a
i Trachypithecus_auratus.k141_722599                     I 110 T 111
s Trachypithecus_crepusculus.k141_582567                       242 1 -     12674 a
i Trachypithecus_crepusculus.k141_582567                 I 110 T 111
s Trachypithecus_cristatus.k141_580354                       11229 1 +     19930 a
i Trachypithecus_cristatus.k141_580354                   I 110 T 111
s Trachypithecus_francoisi.k141_1412647                       7640 1 -     19997 a
i Trachypithecus_francoisi.k141_1412647                  I 110 T 111
s Trachypithecus_geei.k141_277701                            47779 1 -     60166 a
i Trachypithecus_geei.k141_277701                        I 109 T 110
s Trachypithecus_germaini.k141_912491                        15251 1 -     27529 a
i Trachypithecus_germaini.k141_912491                    I 110 T 111
s Trachypithecus_hatinhensis.k141_143409                     15195 1 -     18194 a
i Trachypithecus_hatinhensis.k141_143409                 I 110 T 111
s Trachypithecus_laotum.k141_907409                           8907 1 -     21137 a
i Trachypithecus_laotum.k141_907409                      I 110 T 111
s Trachypithecus_leucocephalus.k141_587342                    7610 1 -     10723 a
i Trachypithecus_leucocephalus.k141_587342               I 110 T 111
s Trachypithecus_melamera.k141_434728                         6782 1 +      9834 a
i Trachypithecus_melamera.k141_434728                    I 110 T 111
s Trachypithecus_obscurus.k141_190785                        25095 1 +     32220 a
i Trachypithecus_obscurus.k141_190785                    I 110 T 111
s Trachypithecus_phayrei.ctg124                            5939197 1 +   6242583 a
i Trachypithecus_phayrei.ctg124                          I 110 T 111
s Trachypithecus_pileatus.k141_2007326                        8448 1 +     20839 a
i Trachypithecus_pileatus.k141_2007326                   I 109 T 110
s Tupaia_chinensis.KB320699.1                              2155694 1 +   4065304 g
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9347 1 -     10553 G
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
e Echinops_telfairi.JH980293.1                            48780689 3 + 111700974 I
e Otolemur_garnettii.GL873799.1                             696396 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         4233 0 +      8798 C
e Galago_senegalensis.k141_631886                             4403 0 +     11339 C
e Galago_moholi.ctg2040                                     426713 0 -    453645 C
e Sapajus_apella.ctg103                                    5420702 76 -   5703754 I
e Mus_pahari.LT608297.1                                   31355125 13 -  89631738 T
e Mus_spretus.CM004101.1                                  90752527 13 - 130317789 T
e Mus_musculus.chr8                                       87650466 13 - 129401213 T
e Mus_caroli.LT608237.1                                   84361468 13 - 120012414 T
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Loris_tardigradus.ctg83                                  1004782 0 +   6120653 C
e Loris_lydekkerianus.k141_2539221                            5962 0 +     11245 C
e Perodicticus_potto.k141_1092580                             8620 0 +     25941 C
e Perodicticus_ibeanus.k141_855320                           10214 0 +     13100 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      15000 0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5480 7 +     86975 I
e Xerus_inauris.XerIna_scaffold_2302                          1179 7 +    224448 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 10904 7 -     43706 I
e Vicugna_pacos.KN270157.1                                 5371997 7 -   5488506 I
e Varecia_variegata.k141_1128296                             11582 0 +     24756 C
e Varecia_rubra.k141_590885                                  11523 0 +     50397 C
e Ursus_maritimus.KK499267.1                               4850551 7 -   5085361 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   53362 63 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4293354 3 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     81309 7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   6516 8 +      8208 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              105556 0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    387336 7 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      118879 7 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 72732 9 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                10912 12 +     41958 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6810881 7 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629              18439 7 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             30850 6 +     97271 I
e Spermophilus_dauricus.KZ294078.1                         1954051 7 -   3870691 I
e Sorex_araneus.JH798187.1                                13651056 93 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               3814 63 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11982 13 -     12148 T
e Scalopus_aquaticus.ScaAqu_scaffold_662                    153257 71 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                87920 4 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570728 13 +  90668790 T
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20274423 7 -  38429054 I
e Pteropus_vampyrus.KN534172.1                                6951 4 -      8028 I
e Pteropus_alecto.KB030862.1                              22976898 4 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         40351 7 +     42204 I
e Pteronotus_parnellii.KE909381.1                            15190 7 -     21811 I
e Psammomys_obesus.NESX01036370.1                            10498 13 -     21651 T
e Propithecus_verreauxi.k141_956661                           4907 5 -      6182 I
e Propithecus_tattersalli.k141_790011                        28684 5 -     67325 I
e Propithecus_perrieri.k141_1200571                           4859 5 -     24134 I
e Propithecus_edwardsi.k141_1176054                          26672 5 +     35766 I
e Propithecus_diadema.k141_58108                              1194 5 -     13098 I
e Propithecus_coronatus.k141_347390                          29151 5 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     990839 5 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2596858 0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                 13455 3 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             1871 11 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     28235 0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18194880 13 -  18517816 T
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12766 7 -     78924 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4721357 7 -   8748460 I
e Panthera_pardus.KV860321.1                                264478 7 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  151269 7 +    230217 I
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       462456 7 -    559221 I
e Orycteropus_afer.OryAfe_flattened_line_144387               9955 3 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80254 13 +    102263 T
e Ondatra_zibethicus.OndZib_scaffold_46174                   25254 13 +     28053 T
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              506767 7 -   2017862 I
e Octodon_degus.JH651603.1                                  746966 0 +  11899542 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761680 0 + 199412804 C
e Nycticebus_coucang.k141_1127096                              250 0 +      2075 C
e Nycticebus_bengalensis.LG01                            102586326 0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9149508 7 -   9404916 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20307617 7 +  31847680 I
e Nannospalax_galili.KL204047.1                            2034174 0 -   3037898 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189371 9 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_281845                          79 9 +      1835 I
e Myotis_lucifugus.GL429869.1                              3903927 12 -   4330536 I
e Myotis_davidii.KB100139.1                                1587835 12 -   6019432 I
e Myotis_brandtii.KE162005.1                                280573 12 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     71356 0 -     80779 C
e Mustela_putorius.JH418006.1                               301574 7 -  14710649 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5056 0 +     14296 C
e Murina_feae.MurFea_scaffold_85699                           6930 12 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   35536 7 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 141735 7 -    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Mirza_zaza.k141_952172                                      9148 0 -     37649 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         6031 7 -      8324 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             34407 9 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1850726 9 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11260586 13 -  27267610 T
e Micronycteris_hirsuta.MicHir_scaffold_52381                15768 4 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    22438 3 -    145209 I
e Microcebus_murinus.CM007674.1                           18291603 0 -  93316391 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182348 13 -  29670104 T
e Meriones_unguiculatus.MerUng_scaffold_7390                 32854 13 +    140813 T
e Mellivora_capensis.MelCap_flattened_line_69365             10161 7 +     13704 I
e Megaderma_lyra.MegLyr_scaffold_4542                        10443 8 -    207569 I
e Marmota_marmota.CZRN01000018.1                          33103196 7 -  40650429 I
e Manis_pentadactyla.KN006162.1                              50599 7 -    317179 I
e Manis_javanica.JSZB01003497.1                              18609 4 +    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_8222                 90732 4 +     94391 I
e Lycaon_pictus.CM007581.1                                17955440 7 -  59628241 I
e Loxodonta_africana.GL010049.1                            4217433 3 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Leptonychotes_weddellii.KB714746.1                       3043163 7 +   3914936 I
e Lepilemur_septentrionalis.k141_185316                      27069 0 +     54090 C
e Lepilemur_ruficaudatus.k141_121139                          1671 0 +     25010 C
e Lepilemur_dorsalis.k141_577674                             29133 0 +     45836 C
e Lepilemur_ankaranensis.k141_596936                         11072 0 -     23766 C
e Lemur_catta.scaffold_24                                 15524178 0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    16481 10 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276904 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Indri_indri.k141_3655594                                   22621 5 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7520996 7 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      83223 0 +    135385 C
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  45130 7 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                1000 3 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20662334 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               242436 7 +    327341 I
e Hapalemur_occidentalis.k141_907772                         13663 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                         13826 0 -     41752 C
e Hapalemur_griseus.k141_1511508                             13725 0 +     18253 C
e Hapalemur_gilberti.k141_488810                             12086 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           6937 0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32714 0 +     78134 C
e Glis_glis.GliGli_scaffold_19807                            31472 0 +     49224 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Galagoides_demidoff.k141_1711393                            1701 0 +     41679 C
e Fukomys_damarensis.KN121974.1                             850545 0 +   3816255 C
e Felis_nigripes.FelNig_flattened_line_20823                  9654 7 -     36744 I
e Felis_catus_fca126.CM031415.1                           20195910 7 + 205367284 I
e Eulemur_sanfordi.k141_1122526                              13878 0 +    111500 C
e Eulemur_rufus.k141_1476633                                  4305 0 -     17153 C
e Eulemur_rubriventer.k141_774594                              252 0 +     13026 C
e Eulemur_mongoz.k141_232305                                 10761 0 +     97555 C
e Eulemur_macaco.k141_1562045                                12831 0 +     75513 C
e Eulemur_fulvus.k141_544389                                 14069 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                            12834 0 +     26330 C
e Eulemur_coronatus.k141_885031                              15630 8 -     25546 I
e Eulemur_collaris.k141_377015                                6606 0 -     16928 C
e Eulemur_albifrons.k141_342033                              13892 0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3328282 71 -   7059049 I
e Equus_przewalskii.KK951119.1                               33514 8 +    498745 I
e Equus_caballus.CM000403.2                               18531485 8 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1283665 8 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2145833 13 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16329424 7 -  41312741 I
e Ellobius_talpinus.LOJH01081419.1                             538 13 +      8657 T
e Ellobius_lutescens.LOEQ01008920.1                          20407 13 -    110024 T
e Elephantulus_edwardii.JH947257.1                         1097777 3 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Eidolon_helvum.KE759718.1                                  10639 4 +     11740 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    36511 0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    6163 8 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  673411 8 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8630236 7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            63648 8 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35877 0 +     51376 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    837190 0 +   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129             28603 7 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_37019               3028 88 -     19598 I
e Cricetulus_griseus.LT883664.1                           11667673 13 + 224834208 T
e Cricetomys_gambianus.CriGam_scaffold_18520                 50299 0 +     63868 C
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          14522 4 -     20389 I
e Condylura_cristata.JH655891.1                           17548142 67 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            173497 9 +    839153 I
e Choloepus_didactylus.ChoDid_scaffold_45914                 18421 8 +     19366 I
e Chinchilla_lanigera.JH722012.1                           1252917 0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           16545 0 +     57038 C
e Cheirogaleus_major.k141_333249                             21180 0 -     52598 C
e Chaetophractus_vellerosus.ChaVel_scaffold_138870             641 8 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2587 8 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     93134 7 +    217609 I
e Castor_canadensis.CasCan_scaffold_2074                    137187 0 +    179628 C
e Carollia_perspicillata.CarPer_scaffold_92756                5224 2 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                    1169 0 -     12242 C
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18500501 7 +  63665305 I
e Canis_lupus_familiaris.chr16                            17958989 218 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9034724 7 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    185338 0 -    185531 I
e CanFam4.chr16                                           17799210 78 -  60362399 I
e Camelus_ferus.KB017975.1                                  403239 7 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2334955 7 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10002497 7 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              54422 10 +     85213 I
e Avahi_laniger.k141_765380                                  53795 15 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  4870 7 +     43469 I
e Arctocebus_calabarensis.k141_2318572                       11570 0 +     14667 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      12720 0 +     20879 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      185462 7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74603 0 -     89534 C
e Ailurus_fulgens.LNAC01001112.1                             79466 7 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9510690 7 -  29979442 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     70906 13 +     87051 T
e Acinonyx_jubatus.LLWD01001279.1                           827416 7 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       6929 2 +     62944 g---a
s Allenopithecus_nigroviridis.k141_3361533                   14755 2 -     52922 g---a
i Allenopithecus_nigroviridis.k141_3361533               T 104 C 0
s Allochrocebus_lhoesti.k141_4309873                         14671 2 -     28001 g---a
i Allochrocebus_lhoesti.k141_4309873                     T 102 C 0
s Allochrocebus_preussi.k141_1442296                          5167 2 -     18505 g---a
i Allochrocebus_preussi.k141_1442296                     T 104 C 0
s Allochrocebus_solatus.k141_166128                           6021 2 -     12518 g---a
i Allochrocebus_solatus.k141_166128                      T 102 C 0
s Alouatta_belzebul.k141_3560514                              7505 2 +     51355 g---a
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                 821 2 -     36483 g---a
i Alouatta_caraya.k141_1701091                           I 202 T 202
s Alouatta_discolor.k141_566626                              11270 2 +     28687 g---a
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1509701                                25097 2 +     25266 g---a
i Alouatta_juara.k141_1509701                            I 205 T 205
s Alouatta_macconnelli.k141_918386                             818 2 -      9457 g---a
i Alouatta_macconnelli.k141_918386                       I 205 T 205
s Alouatta_nigerrima.k141_3472759                            18404 2 -     18578 g---a
i Alouatta_nigerrima.k141_3472759                        I 205 T 205
s Alouatta_palliata.k141_2135620                              3586 2 +     47717 g---a
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                               500 2 +      5663 g---a
i Alouatta_puruensis.k141_362188                         I 209 T 209
s Alouatta_seniculus.k141_117119                             14952 2 +     50774 g---a
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  15528 2 -     33861 g---a
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            15548 2 -     34016 g---a
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297945 2 -   5030052 g---a
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             15550 2 -     34685 g---a
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28674 2 -     47192 g---a
i Aotus_vociferans.k141_344750                           C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       11570 2 +     14667 G---A
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Callibella_humilis.k141_1278103                             5287 2 -     10423 a---a
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             24754 2 +     31915 g---a
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            5249 2 +      5267 a---a
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590463 2 - 189096842 a---a
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1164682                             11994 2 -     12001 A---A
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Carlito_syrichta.NW_007259797.1                           156093 2 -    496798 g---a
i Carlito_syrichta.NW_007259797.1                        I 3 I 9
s Cebuella_niveiventris.k141_1251222                          9908 2 -     11392 a---a
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               6006 2 -      7577 a---a
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25652577 5 +  26074798 aagga
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                 547 5 +     28840 aagca
i Cebus_olivaceus.k141_1764483                           C 0 I 1
s Cebus_unicolor.k141_1837183                                  273 5 +     14051 gaggg
i Cebus_unicolor.k141_1837183                            C 0 I 1
s Cephalopachus_bancanus.k141_1423433                         5591 2 +     31688 g---a
i Cephalopachus_bancanus.k141_1423433                    I 117 T 118
s Cercocebus_atys.KQ010504.1                               4475676 2 +   4669795 g---a
i Cercocebus_atys.KQ010504.1                             T 108 C 0
s Cercocebus_chrysogaster.k141_393940                        14221 2 -     19203 g---a
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3342297                            837 2 -     14043 g---a
i Cercocebus_lunulatus.k141_3342297                      T 108 C 0
s Cercocebus_torquatus.k141_3057011                           8873 2 +     27781 g---a
i Cercocebus_torquatus.k141_3057011                      T 105 C 0
s Cercopithecus_ascanius.k141_1024104                         9042 2 -     20310 g---a
i Cercopithecus_ascanius.k141_1024104                    T 104 C 0
s Cercopithecus_cephus.k141_1078548                          12021 2 +     29689 g---a
i Cercopithecus_cephus.k141_1078548                      T 105 C 0
s Cercopithecus_diana.k141_1150327                            6775 2 -     20078 g---a
i Cercopithecus_diana.k141_1150327                       T 104 C 0
s Cercopithecus_hamlyni.k141_187466                          14698 2 -     27936 g---a
i Cercopithecus_hamlyni.k141_187466                      T 98 C 0
s Cercopithecus_lowei.k141_1854285                            3562 2 -     17152 g---a
i Cercopithecus_lowei.k141_1854285                       T 104 C 0
s Cercopithecus_albogularis.ctg5                                38817101 2 +  39242232 g---a
i Cercopithecus_albogularis.ctg5                               T 104 C 0
s Cercopithecus_mona.ctg39                                21222793 2 -  21565898 g---a
i Cercopithecus_mona.ctg39                               T 104 C 0
s Cercopithecus_neglectus.k141_2526306                       39911 2 -     53127 G---a
i Cercopithecus_neglectus.k141_2526306                   T 104 C 0
s Cercopithecus_nictitans.k141_1119862                         162 2 +     13442 g---a
i Cercopithecus_nictitans.k141_1119862                   T 104 C 0
s Cercopithecus_petaurista.k141_807961                       14711 2 -     27947 g---a
i Cercopithecus_petaurista.k141_807961                   T 104 C 0
s Cercopithecus_pogonias.k141_822820                         14687 2 +     17596 g---a
i Cercopithecus_pogonias.k141_822820                     T 104 C 0
s Cercopithecus_roloway.k141_2581234                           734 2 +     14005 g---a
i Cercopithecus_roloway.k141_2581234                     T 104 C 0
s Chiropotes_albinasus.k141_2206961                            210 2 -     15524 g---a
i Chiropotes_albinasus.k141_2206961                      C 0 I 23
s Chlorocebus_aethiops.ctg25                              18428671 2 -  18827391 g---a
i Chlorocebus_aethiops.ctg25                             T 104 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15108 2 -     50209 g---a
i Chlorocebus_pygerythrus.k141_1025673                   T 104 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422108 2 + 135778131 g---a
i Chlorocebus_sabaeus.CM001947.1                         T 104 C 0
s Colobus_angolensis.KN981557.1                            1910617 2 +   2368649 g---a
i Colobus_angolensis.KN981557.1                          T 107 C 0
s Colobus_guereza.LG01                                   199948976 2 + 200372422 G---A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37151 2 +     84244 g---a
i Colobus_polykomos.k141_906115                          T 107 C 0
s Daubentonia_madagascariensis.ctg71                      12537397 2 -  12879189 G---A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Erythrocebus_patas.Contig38                             21205278 2 -  21539334 g---a
i Erythrocebus_patas.Contig38                            T 102 C 0
s Galago_moholi.ctg2040                                     426713 2 -    453645 G---A
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4403 2 +     11339 g---a
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            1701 2 +     41679 G---A
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1298 2 -      9135 g---g
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              16072 2 -     32273 g---a
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186338210 2 + 186649187 g---a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hoolock_leuconedys.ctg274                                    434884 2 +    630532 g---a
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7566 2 +     64341 g---a
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_3350179                           4889 2 +      4941 g---a
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        7607 2 +     35603 g---a
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    29274 2 +     38576 c---a
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         25974 2 +     66356 c---a
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6582 2 -     14121 a---g
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437215 2 +   1826925 g---a
i Lophocebus_aterrimus.ctg367                            T 114 C 0
s Loris_lydekkerianus.k141_2539221                            5962 2 +     11245 G---A
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004782 2 +   6120653 G---A
i Loris_tardigradus.ctg83                                C 0 C 0
s Macaca_arctoides.k141_2326796                               7041 2 +     40492 g---a
i Macaca_arctoides.k141_2326796                          T 104 C 0
s Macaca_assamensis.Contig5                               59676300 2 +  60120075 g---a
i Macaca_assamensis.Contig5                              T 104 C 0
s Macaca_cyclopis.k119_18836                                 12813 2 -     26193 G---A
i Macaca_cyclopis.k119_18836                             T 107 C 0
s Macaca_fascicularis.k141_814140                            80597 2 -    114318 g---a
i Macaca_fascicularis.k141_814140                        T 107 C 0
s Macaca_fuscata.k119_255327                                  6288 2 -     23192 g---a
i Macaca_fuscata.k119_255327                             T 103 C 0
s Macaca_leonina.k141_3550399                                15757 2 -     29190 g---a
i Macaca_leonina.k141_3550399                            T 107 C 0
s Macaca_maura.k141_2733130                                  24322 2 +     37952 g---a
i Macaca_maura.k141_2733130                              T 107 C 0
s Macaca_mulatta.NC_041758.1                             186839411 2 + 187317192 g---a
i Macaca_mulatta.NC_041758.1                             T 107 C 0
s Macaca_nemestrina.KQ007038.1                            25457974 2 -  25927173 g---a
i Macaca_nemestrina.KQ007038.1                           T 107 C 0
s Macaca_nigra.k141_1655396                                  80170 2 +     89720 g---a
i Macaca_nigra.k141_1655396                              T 107 C 0
s Macaca_radiata.k141_3680011                                 7171 2 +     20474 g---a
i Macaca_radiata.k141_3680011                            T 107 C 0
s Macaca_siberu.k141_635500                                   6971 2 -     14993 g---a
i Macaca_siberu.k141_635500                              T 107 C 0
s Macaca_silenus.Contig273                                  329837 2 -    668171 g---a
i Macaca_silenus.Contig273                               T 107 C 0
s Macaca_thibetana.k99_256239                                 5287 2 -     24072 g---a
i Macaca_thibetana.k99_256239                            T 104 C 0
s Macaca_tonkeana.k141_1498238                               25909 2 -     45290 g---a
i Macaca_tonkeana.k141_1498238                           T 107 C 0
s Mandrillus_leucophaeus.scaffold280                      23937496 2 -  24302211 g---a
i Mandrillus_leucophaeus.scaffold280                     T 108 C 0
s Mandrillus_sphinx.Contig270                               351728 2 +    752769 g---a
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Mico_argentatus.k141_1239457                                5823 2 -      7380 a---a
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_1976199                               4896 2 +     18990 a---a
i Mico_humeralifer.k141_1976199                          C 0 C 0
s Mico_schneideri.k141_1950671                                      5835 2 -      7356 a---a
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9313 2 -     28506 g---a
i Miopithecus_ogouensis.k141_534055                      C 0 T 104
s Nasalis_larvatus.k141_413338                               15204 2 +     21681 g---a
i Nasalis_larvatus.k141_413338                           T 111 C 0
s Nycticebus_bengalensis.LG01                            102586326 2 - 196305487 G---A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              250 2 +      2075 g---a
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761680 2 + 199412804 G---A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1363638 2 +   3988456 a---a
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147441 2 + 174332312 a---g
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4233 2 +      8798 G---A
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696396 2 -   1103335 g---a
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    44161 2 +     80009 g---a
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189143175 2 + 189151597 g---a
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                183443294 2 + 183742232 g---a
i Papio_anubis.CM001495.2                                T 112 C 0
s Papio_cynocephalus.k141_4307930                             6944 2 +     20448 g---a
i Papio_cynocephalus.k141_4307930                        T 108 C 0
s Papio_hamadryas.Contig39                                20563752 2 +  20919399 g---a
i Papio_hamadryas.Contig39                               T 112 C 0
s Papio_kindae.k141_1936966                                   5688 2 +     41871 g---a
i Papio_kindae.k141_1936966                              T 108 C 0
s Papio_papio.k141_802527                                     8973 2 +     27711 g---a
i Papio_papio.k141_802527                                T 116 C 0
s Papio_ursinus.k141_3428135                                  9046 2 +      9205 g---a
i Papio_ursinus.k141_3428135                             T 112 C 0
s Perodicticus_ibeanus.k141_855320                           10214 2 +     13100 G---A
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8620 2 +     25941 G---A
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Piliocolobus_badius.k141_1234363                           43699 2 +     62158 g---a
i Piliocolobus_badius.k141_1234363                       T 107 C 0
s Piliocolobus_gordonorum.k141_381342                        38446 2 +     89929 g---a
i Piliocolobus_gordonorum.k141_381342                    T 107 C 0
s Piliocolobus_kirkii.k141_448987                            39862 2 +     51399 g---a
i Piliocolobus_kirkii.k141_448987                        T 107 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296100 2 -  14605196 g---a
i Piliocolobus_tephrosceles.PDMG02000141.1               T 107 C 0
s Pongo_abelii.CM009266.2                                189131203 2 + 189387572 g---a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570811 2 +   9816681 g---a
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               73380 2 -     81375 g---a
i Presbytis_comata.k141_677006                           T 111 C 0
s Presbytis_mitrata.k141_1087752                              5200 2 +     19060 g---a
i Presbytis_mitrata.k141_1087752                         T 111 C 0
s Pygathrix_cinerea.k141_1153803                             15213 2 -     91421 g---a
i Pygathrix_cinerea.k141_1153803                         T 111 C 0
s Pygathrix_nigripes_b.ctg100                                 7609333 2 +   7812017 g---a
i Pygathrix_nigripes_b.ctg100                               T 111 C 0
s Pygathrix_nigripes_a.k141_215492                             15185 2 -     72585 g---a
i Pygathrix_nigripes_a.k141_215492                         T 111 C 0
s Rhinopithecus_bieti.k119_217274                             6899 2 -     11128 g---a
i Rhinopithecus_bieti.k119_217274                        T 108 I 108
s Rhinopithecus_roxellana.NC_044550.1                     91236252 2 - 195417433 g---a
i Rhinopithecus_roxellana.NC_044550.1                    T 104 I 104
s Rhinopithecus_strykeri.ctg102                            7671904 2 +   7961872 g---a
i Rhinopithecus_strykeri.ctg102                          T 108 I 108
s Saguinus_bicolor.k141_8081                                   221 2 +     42994 g---a
i Saguinus_bicolor.k141_8081                             T 225 I 225
s Saguinus_imperator.k141_57697                                231 2 +      1030 c---a
i Saguinus_imperator.k141_57697                          C 0 C 0
s Saguinus_inustus.k141_699149                               13620 2 +     13640 g---a
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               8489 2 +      8564 g---a
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469339 2 + 209938924 g---a
i Saguinus_midas.LG03                                    C 0 I 458
s Saguinus_mystax.k141_374627                                 8045 2 -      9399 g---a
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119950891 2 - 121099817 g---a
i Saimiri_boliviensis.NW_024100920.1                     T 283 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23347 2 +     46362 g---a
i Saimiri_cassiquiarensis.k141_2188234                   T 166 C 0
s Saimiri_macrodon.k141_716185                               23442 2 +     45824 g---a
i Saimiri_macrodon.k141_716185                           T 166 C 0
s Saimiri_oerstedii.k141_1487881                             40070 2 -     64574 g---a
i Saimiri_oerstedii.k141_1487881                         T 217 C 0
s Saimiri_sciureus.k141_2278166                               3076 2 -     23631 g---a
i Saimiri_sciureus.k141_2278166                          T 283 C 0
s Saimiri_ustus.k141_1484609                                 23338 2 -     61129 g---a
i Saimiri_ustus.k141_1484609                             T 166 C 0
s Sapajus_apella.ctg103                                    5420778 1 -   5703754 ----a
i Sapajus_apella.ctg103                                  I 76 C 0
s Sapajus_macrocephalus.k141_351809                          56115 2 -     80660 c---a
i Sapajus_macrocephalus.k141_351809                      C 0 T 296
s Semnopithecus_entellus.k141_11662                          19722 2 -     19888 G---A
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26927 2 +     39453 g---a
i Semnopithecus_hypoleucos.k141_1615806                  T 111 C 0
s Semnopithecus_johnii.k141_670120                            7446 2 +     27826 g---a
i Semnopithecus_johnii.k141_670120                       T 110 C 0
s Semnopithecus_priam.k141_638794                             6967 2 -     19483 g---a
i Semnopithecus_priam.k141_638794                        T 111 C 0
s Semnopithecus_schistaceus.k141_1572284                       379 2 -     12762 G---A
i Semnopithecus_schistaceus.k141_1572284                 C 0 T 105
s Semnopithecus_vetulus.k141_910252                            240 2 +     13763 g---a
i Semnopithecus_vetulus.k141_910252                      C 0 T 110
s Tarsius_lariang.k141_2201908                               26584 2 +     70052 g---a
i Tarsius_lariang.k141_2201908                           I 108 T 109
s Tarsius_wallacei.k141_254427                                1381 2 -     16117 g---a
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428616 2 + 186847797 g---a
i Theropithecus_gelada.CM009954.1                        T 108 C 0
s Trachypithecus_auratus.k141_722599                         11018 2 -     20410 g---a
i Trachypithecus_auratus.k141_722599                     T 111 C 0
s Trachypithecus_crepusculus.k141_582567                       132 2 -     12674 g---a
i Trachypithecus_crepusculus.k141_582567                 T 111 C 0
s Trachypithecus_cristatus.k141_580354                       11119 2 +     19930 g---a
i Trachypithecus_cristatus.k141_580354                   T 111 C 0
s Trachypithecus_francoisi.k141_1412647                       7530 2 -     19997 g---a
i Trachypithecus_francoisi.k141_1412647                  T 111 C 0
s Trachypithecus_geei.k141_277701                            47670 2 -     60166 g---a
i Trachypithecus_geei.k141_277701                        T 110 C 0
s Trachypithecus_germaini.k141_912491                        15141 2 -     27529 g---a
i Trachypithecus_germaini.k141_912491                    T 111 C 0
s Trachypithecus_hatinhensis.k141_143409                     15085 2 -     18194 g---a
i Trachypithecus_hatinhensis.k141_143409                 T 111 C 0
s Trachypithecus_laotum.k141_907409                           8797 2 -     21137 g---a
i Trachypithecus_laotum.k141_907409                      T 111 C 0
s Trachypithecus_leucocephalus.k141_587342                    7500 2 -     10723 g---a
i Trachypithecus_leucocephalus.k141_587342               T 111 C 0
s Trachypithecus_melamera.k141_434728                         6672 2 +      9834 g---a
i Trachypithecus_melamera.k141_434728                    T 111 C 0
s Trachypithecus_obscurus.k141_190785                        24985 2 +     32220 g---a
i Trachypithecus_obscurus.k141_190785                    T 111 C 0
s Trachypithecus_phayrei.ctg124                            5939087 2 +   6242583 g---a
i Trachypithecus_phayrei.ctg124                          T 111 C 0
s Trachypithecus_pileatus.k141_2007326                        8339 2 +     20839 g---a
i Trachypithecus_pileatus.k141_2007326                   T 110 C 0
s Tupaia_chinensis.KB320699.1                              2155695 2 +   4065304 g---a
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9348 2 -     10553 G---A
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
e Echinops_telfairi.JH980293.1                            48780689 3 + 111700974 I
e Mus_pahari.LT608297.1                                   31355125 13 -  89631738 T
e Mus_spretus.CM004101.1                                  90752527 13 - 130317789 T
e Mus_musculus.chr8                                       87650466 13 - 129401213 T
e Mus_caroli.LT608237.1                                   84361468 13 - 120012414 T
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      15000 0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5480 7 +     86975 I
e Xerus_inauris.XerIna_scaffold_2302                          1179 7 +    224448 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 10904 7 -     43706 I
e Vicugna_pacos.KN270157.1                                 5371997 7 -   5488506 I
e Varecia_variegata.k141_1128296                             11582 0 +     24756 C
e Varecia_rubra.k141_590885                                  11523 0 +     50397 C
e Ursus_maritimus.KK499267.1                               4850551 7 -   5085361 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   53362 63 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4293354 3 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     81309 7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   6516 8 +      8208 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              105556 0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    387336 7 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      118879 7 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 72732 9 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                10912 12 +     41958 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6810881 7 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629              18439 7 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             30850 6 +     97271 I
e Spermophilus_dauricus.KZ294078.1                         1954051 7 -   3870691 I
e Sorex_araneus.JH798187.1                                13651056 93 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               3814 63 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11982 13 -     12148 T
e Scalopus_aquaticus.ScaAqu_scaffold_662                    153257 71 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                87920 4 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570728 13 +  90668790 T
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20274423 7 -  38429054 I
e Pteropus_vampyrus.KN534172.1                                6951 4 -      8028 I
e Pteropus_alecto.KB030862.1                              22976898 4 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         40351 7 +     42204 I
e Pteronotus_parnellii.KE909381.1                            15190 7 -     21811 I
e Psammomys_obesus.NESX01036370.1                            10498 13 -     21651 T
e Propithecus_verreauxi.k141_956661                           4907 5 -      6182 I
e Propithecus_tattersalli.k141_790011                        28684 5 -     67325 I
e Propithecus_perrieri.k141_1200571                           4859 5 -     24134 I
e Propithecus_edwardsi.k141_1176054                          26672 5 +     35766 I
e Propithecus_diadema.k141_58108                              1194 5 -     13098 I
e Propithecus_coronatus.k141_347390                          29151 5 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     990839 5 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2596858 0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                 13455 3 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             1871 11 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     28235 0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18194880 13 -  18517816 T
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12766 7 -     78924 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4721357 7 -   8748460 I
e Panthera_pardus.KV860321.1                                264478 7 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  151269 7 +    230217 I
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       462456 7 -    559221 I
e Orycteropus_afer.OryAfe_flattened_line_144387               9955 3 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80254 13 +    102263 T
e Ondatra_zibethicus.OndZib_scaffold_46174                   25254 13 +     28053 T
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              506767 7 -   2017862 I
e Octodon_degus.JH651603.1                                  746966 0 +  11899542 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9149508 7 -   9404916 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20307617 7 +  31847680 I
e Nannospalax_galili.KL204047.1                            2034174 0 -   3037898 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189371 9 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_281845                          79 9 +      1835 I
e Myotis_lucifugus.GL429869.1                              3903927 12 -   4330536 I
e Myotis_davidii.KB100139.1                                1587835 12 -   6019432 I
e Myotis_brandtii.KE162005.1                                280573 12 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     71356 0 -     80779 C
e Mustela_putorius.JH418006.1                               301574 7 -  14710649 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5056 0 +     14296 C
e Murina_feae.MurFea_scaffold_85699                           6930 12 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   35536 7 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 141735 7 -    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Mirza_zaza.k141_952172                                      9148 0 -     37649 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         6031 7 -      8324 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             34407 9 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1850726 9 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11260586 13 -  27267610 T
e Micronycteris_hirsuta.MicHir_scaffold_52381                15768 4 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    22438 3 -    145209 I
e Microcebus_murinus.CM007674.1                           18291603 0 -  93316391 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182348 13 -  29670104 T
e Meriones_unguiculatus.MerUng_scaffold_7390                 32854 13 +    140813 T
e Mellivora_capensis.MelCap_flattened_line_69365             10161 7 +     13704 I
e Megaderma_lyra.MegLyr_scaffold_4542                        10443 8 -    207569 I
e Marmota_marmota.CZRN01000018.1                          33103196 7 -  40650429 I
e Manis_pentadactyla.KN006162.1                              50599 7 -    317179 I
e Manis_javanica.JSZB01003497.1                              18609 4 +    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_8222                 90732 4 +     94391 I
e Lycaon_pictus.CM007581.1                                17955440 7 -  59628241 I
e Loxodonta_africana.GL010049.1                            4217433 3 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Leptonychotes_weddellii.KB714746.1                       3043163 7 +   3914936 I
e Lepilemur_septentrionalis.k141_185316                      27069 0 +     54090 C
e Lepilemur_ruficaudatus.k141_121139                          1671 0 +     25010 C
e Lepilemur_dorsalis.k141_577674                             29133 0 +     45836 C
e Lepilemur_ankaranensis.k141_596936                         11072 0 -     23766 C
e Lemur_catta.scaffold_24                                 15524178 0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    16481 10 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276904 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Indri_indri.k141_3655594                                   22621 5 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7520996 7 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      83223 0 +    135385 C
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  45130 7 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                1000 3 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20662334 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               242436 7 +    327341 I
e Hapalemur_occidentalis.k141_907772                         13663 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                         13826 0 -     41752 C
e Hapalemur_griseus.k141_1511508                             13725 0 +     18253 C
e Hapalemur_gilberti.k141_488810                             12086 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           6937 0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32714 0 +     78134 C
e Glis_glis.GliGli_scaffold_19807                            31472 0 +     49224 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Fukomys_damarensis.KN121974.1                             850545 0 +   3816255 C
e Felis_nigripes.FelNig_flattened_line_20823                  9654 7 -     36744 I
e Felis_catus_fca126.CM031415.1                           20195910 7 + 205367284 I
e Eulemur_sanfordi.k141_1122526                              13878 0 +    111500 C
e Eulemur_rufus.k141_1476633                                  4305 0 -     17153 C
e Eulemur_rubriventer.k141_774594                              252 0 +     13026 C
e Eulemur_mongoz.k141_232305                                 10761 0 +     97555 C
e Eulemur_macaco.k141_1562045                                12831 0 +     75513 C
e Eulemur_fulvus.k141_544389                                 14069 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                            12834 0 +     26330 C
e Eulemur_coronatus.k141_885031                              15630 8 -     25546 I
e Eulemur_collaris.k141_377015                                6606 0 -     16928 C
e Eulemur_albifrons.k141_342033                              13892 0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3328282 71 -   7059049 I
e Equus_przewalskii.KK951119.1                               33514 8 +    498745 I
e Equus_caballus.CM000403.2                               18531485 8 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1283665 8 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2145833 13 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16329424 7 -  41312741 I
e Ellobius_talpinus.LOJH01081419.1                             538 13 +      8657 T
e Ellobius_lutescens.LOEQ01008920.1                          20407 13 -    110024 T
e Elephantulus_edwardii.JH947257.1                         1097777 3 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Eidolon_helvum.KE759718.1                                  10639 4 +     11740 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    36511 0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    6163 8 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  673411 8 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8630236 7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            63648 8 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35877 0 +     51376 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    837190 0 +   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129             28603 7 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_37019               3028 88 -     19598 I
e Cricetulus_griseus.LT883664.1                           11667673 13 + 224834208 T
e Cricetomys_gambianus.CriGam_scaffold_18520                 50299 0 +     63868 C
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          14522 4 -     20389 I
e Condylura_cristata.JH655891.1                           17548142 67 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            173497 9 +    839153 I
e Choloepus_didactylus.ChoDid_scaffold_45914                 18421 8 +     19366 I
e Chinchilla_lanigera.JH722012.1                           1252917 0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           16545 0 +     57038 C
e Cheirogaleus_major.k141_333249                             21180 0 -     52598 C
e Chaetophractus_vellerosus.ChaVel_scaffold_138870             641 8 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2587 8 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     93134 7 +    217609 I
e Castor_canadensis.CasCan_scaffold_2074                    137187 0 +    179628 C
e Carollia_perspicillata.CarPer_scaffold_92756                5224 2 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                    1169 0 -     12242 C
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18500501 7 +  63665305 I
e Canis_lupus_familiaris.chr16                            17958989 218 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9034724 7 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    185338 0 -    185531 I
e CanFam4.chr16                                           17799210 78 -  60362399 I
e Camelus_ferus.KB017975.1                                  403239 7 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2334955 7 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10002497 7 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              54422 10 +     85213 I
e Avahi_laniger.k141_765380                                  53795 15 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  4870 7 +     43469 I
e Aplodontia_rufa.AprRuf_scaffold_68852                      12720 0 +     20879 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      185462 7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74603 0 -     89534 C
e Ailurus_fulgens.LNAC01001112.1                             79466 7 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9510690 7 -  29979442 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     70906 13 +     87051 T
e Acinonyx_jubatus.LLWD01001279.1                           827416 7 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       6931 1 +     62944 g
s Allenopithecus_nigroviridis.k141_3361533                   14757 1 -     52922 a
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         14673 1 -     28001 a
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          5169 1 -     18505 a
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           6023 1 -     12518 a
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              7507 1 +     51355 g
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                 621 1 -     36483 g
i Alouatta_caraya.k141_1701091                           T 202 C 0
s Alouatta_discolor.k141_566626                              11272 1 +     28687 c
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1509701                                24894 1 +     25266 g
i Alouatta_juara.k141_1509701                            T 205 C 0
s Alouatta_macconnelli.k141_918386                             615 1 -      9457 g
i Alouatta_macconnelli.k141_918386                       T 205 C 0
s Alouatta_nigerrima.k141_3472759                            18201 1 -     18578 g
i Alouatta_nigerrima.k141_3472759                        T 205 C 0
s Alouatta_palliata.k141_2135620                              3588 1 +     47717 g
i Alouatta_palliata.k141_2135620                         C 0 I 202
s Alouatta_puruensis.k141_362188                               293 1 +      5663 g
i Alouatta_puruensis.k141_362188                         T 209 C 0
s Alouatta_seniculus.k141_117119                             14954 1 +     50774 g
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  15530 1 -     33861 a
i Aotus_azarae.k141_3104676                              C 0 I 203
s Aotus_griseimembra.k141_2240599                            15550 1 -     34016 a
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297947 1 -   5030052 a
i Aotus_nancymaae.KZ198451.1                             C 0 I 210
s Aotus_trivirgatus.k141_2152450                             15552 1 -     34685 a
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28676 1 -     47192 a
i Aotus_vociferans.k141_344750                           C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       11572 1 +     14667 A
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Callibella_humilis.k141_1278103                             5289 1 -     10423 a
i Callibella_humilis.k141_1278103                        C 0 I 264
s Callimico_goeldii.k141_1091182                             24756 1 +     31915 a
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_512088                            5251 1 +      5267 a
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590465 1 - 189096842 a
i Callithrix_jacchus.pat_scaffold_3                      C 0 I 242
s Callithrix_kuhlii.k119_1164682                             11996 1 -     12001 A
i Callithrix_kuhlii.k119_1164682                         C 0 C 0
s Carlito_syrichta.NW_007247396.1                           201470 1 +    308752 a
i Carlito_syrichta.NW_007247396.1                        I 1 C 0
s Cebuella_niveiventris.k141_1251222                          9910 1 -     11392 a
i Cebuella_niveiventris.k141_1251222                     C 0 I 278
s Cebuella_pygmaea.k141_1309012                               6008 1 -      7577 a
i Cebuella_pygmaea.k141_1309012                          C 0 I 248
s Cebus_albifrons.Contig27                                25652582 1 +  26074798 a
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_398305                                 1684 1 +      1777 a
i Cebus_olivaceus.k141_398305                            I 78 I 10
s Cebus_unicolor.k141_544048                                 50023 1 -     74725 a
i Cebus_unicolor.k141_544048                             I 80 I 10
s Cephalopachus_bancanus.k141_1423433                         5475 1 +     31688 a
i Cephalopachus_bancanus.k141_1423433                    T 118 C 0
s Cercocebus_atys.KQ010504.1                               4475678 1 +   4669795 a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_393940                        14223 1 -     19203 a
i Cercocebus_chrysogaster.k141_393940                    C 0 C 0
s Cercocebus_lunulatus.k141_3342297                            839 1 -     14043 a
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           8875 1 +     27781 a
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         9044 1 -     20310 a
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          12023 1 +     29689 a
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            6777 1 -     20078 a
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          14700 1 -     27936 a
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            3564 1 -     17152 a
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38817103 1 +  39242232 a
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222795 1 -  21565898 a
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       39913 1 -     53127 a
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                         164 1 +     13442 a
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14713 1 -     27947 a
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         14689 1 +     17596 a
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                           736 1 +     14005 a
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chiropotes_albinasus.k141_2206961                            235 1 -     15524 a
i Chiropotes_albinasus.k141_2206961                      I 23 C 0
s Chlorocebus_aethiops.ctg25                              18428673 1 -  18827391 a
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15110 1 -     50209 a
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422110 1 + 135778131 a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1910619 1 +   2368649 a
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199948978 1 + 200372422 G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37153 1 +     84244 a
i Colobus_polykomos.k141_906115                          C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537399 1 -  12879189 A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Erythrocebus_patas.Contig38                             21205280 1 -  21539334 a
i Erythrocebus_patas.Contig38                            C 0 C 0
s Galago_moholi.ctg2040                                     426715 1 -    453645 A
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4405 1 +     11339 a
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            1703 1 +     41679 A
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1300 1 -      9135 a
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              16074 1 -     32273 a
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186338212 1 + 186649187 a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hoolock_leuconedys.ctg274                                    434886 1 +    630532 a
i Hoolock_leuconedys.ctg274                                 C 0 I 99
s Leontocebus_fuscicollis.k141_1820339                        7568 1 +     64341 a
i Leontocebus_fuscicollis.k141_1820339                   C 0 I 264
s Leontocebus_illigeri.k141_3350179                           4891 1 +      4941 a
i Leontocebus_illigeri.k141_3350179                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        7609 1 +     35603 a
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    29276 1 +     38576 g
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         25976 1 +     66356 g
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6584 1 -     14121 a
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 5
s Lophocebus_aterrimus.ctg367                              1437217 1 +   1826925 a
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5964 1 +     11245 A
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004784 1 +   6120653 A
i Loris_tardigradus.ctg83                                C 0 C 0
s Macaca_arctoides.k141_2326796                               7043 1 +     40492 a
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59676302 1 +  60120075 a
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 12815 1 -     26193 A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            80599 1 -    114318 a
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  6290 1 -     23192 a
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                15759 1 -     29190 a
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  24324 1 +     37952 a
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186839413 1 + 187317192 a
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25457976 1 -  25927173 a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  80172 1 +     89720 a
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 7173 1 +     20474 a
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   6973 1 -     14993 a
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  329839 1 -    668171 a
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 5289 1 -     24072 a
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               25911 1 -     45290 a
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23937498 1 -  24302211 a
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               351730 1 +    752769 g
i Mandrillus_sphinx.Contig270                            C 0 T 107
s Mico_argentatus.k141_1239457                                5825 1 -      7380 g
i Mico_argentatus.k141_1239457                           C 0 I 242
s Mico_humeralifer.k141_1976199                               4898 1 +     18990 a
i Mico_humeralifer.k141_1976199                          C 0 n 0
s Mico_schneideri.k141_1950671                                      5837 1 -      7356 g
i Mico_schneideri.k141_1950671                                 C 0 I 242
s Miopithecus_ogouensis.k141_534055                           9211 1 -     28506 a
i Miopithecus_ogouensis.k141_534055                      T 104 C 0
s Nasalis_larvatus.k141_413338                               15206 1 +     21681 a
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nycticebus_bengalensis.LG01                            102586328 1 - 196305487 A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              252 1 +      2075 a
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761682 1 + 199412804 A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1363640 1 +   3988456 a
i Ochotona_princeps.JH802162.1                           C 0 I 14
s Oryctolagus_cuniculus.CM000791.1                        67147443 1 + 174332312 a
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 5
s Otolemur_crassicaudatus.k141_222918                         4235 1 +      8798 A
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696398 1 -   1103335 a
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    44163 1 +     80009 a
i Pan_paniscus.KQ411613.1                                C 0 I 111
s Pan_troglodytes.KZ622849.1                                 22365 1 +    110857 a
i Pan_troglodytes.KZ622849.1                             I 14 I 303
s Papio_anubis.CM001495.2                                183443296 1 + 183742232 a
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             6946 1 +     20448 a
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563754 1 +  20919399 a
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   5690 1 +     41871 a
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     8975 1 +     27711 a
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  9048 1 +      9205 a
i Papio_ursinus.k141_3428135                             C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10216 1 +     13100 A
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8622 1 +     25941 A
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Piliocolobus_badius.k141_1234363                           43701 1 +     62158 a
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        38448 1 +     89929 a
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            39864 1 +     51399 a
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296102 1 -  14605196 a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189131205 1 + 189387572 a
i Pongo_abelii.CM009266.2                                C 0 I 107
s Pongo_pygmaeus.ctg66                                     9570813 1 +   9816681 a
i Pongo_pygmaeus.ctg66                                   C 0 I 106
s Presbytis_comata.k141_677006                               73382 1 -     81375 a
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              5202 1 +     19060 a
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15215 1 -     91421 a
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7609335 1 +   7812017 a
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             15187 1 -     72585 a
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             7009 1 -     11128 g
i Rhinopithecus_bieti.k119_217274                        I 108 T 109
s Rhinopithecus_roxellana.NC_044550.1                     91236358 1 - 195417433 g
i Rhinopithecus_roxellana.NC_044550.1                    I 104 T 105
s Rhinopithecus_strykeri.ctg102                            7672014 1 +   7961872 g
i Rhinopithecus_strykeri.ctg102                          I 108 T 109
s Saguinus_bicolor.k141_8081                                   448 1 +     42994 g
i Saguinus_bicolor.k141_8081                             I 225 C 0
s Saguinus_imperator.k141_57697                                233 1 +      1030 g
i Saguinus_imperator.k141_57697                          C 0 C 0
s Saguinus_inustus.k141_699149                               13622 1 +     13640 a
i Saguinus_inustus.k141_699149                           C 0 C 0
s Saguinus_labiatus.k141_285685                               8491 1 +      8564 a
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469799 1 + 209938924 g
i Saguinus_midas.LG03                                    I 458 C 0
s Saguinus_mystax.k141_374627                                 8047 1 -      9399 a
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119950893 1 - 121099817 a
i Saimiri_boliviensis.NW_024100920.1                     C 0 I 283
s Saimiri_cassiquiarensis.k141_2188234                       23349 1 +     46362 a
i Saimiri_cassiquiarensis.k141_2188234                   C 0 I 166
s Saimiri_macrodon.k141_716185                               23444 1 +     45824 a
i Saimiri_macrodon.k141_716185                           C 0 I 166
s Saimiri_oerstedii.k141_1487881                             40072 1 -     64574 a
i Saimiri_oerstedii.k141_1487881                         C 0 I 217
s Saimiri_sciureus.k141_2278166                               3078 1 -     23631 a
i Saimiri_sciureus.k141_2278166                          C 0 I 283
s Saimiri_ustus.k141_1484609                                 23340 1 -     61129 a
i Saimiri_ustus.k141_1484609                             C 0 I 166
s Sapajus_apella.ctg103                                    5420779 1 -   5703754 a
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          55821 1 -     80660 a
i Sapajus_macrocephalus.k141_351809                      T 296 I 296
s Semnopithecus_entellus.k141_11662                          19724 1 -     19888 A
i Semnopithecus_entellus.k141_11662                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      26929 1 +     39453 a
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            7448 1 +     27826 a
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             6969 1 -     19483 a
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                       276 1 -     12762 a
i Semnopithecus_schistaceus.k141_1572284                 T 105 I 112
s Semnopithecus_vetulus.k141_910252                            132 1 +     13763 a
i Semnopithecus_vetulus.k141_910252                      T 110 I 117
s Tarsius_lariang.k141_2201908                               26477 1 +     70052 a
i Tarsius_lariang.k141_2201908                           T 109 I 109
s Tarsius_wallacei.k141_254427                                1383 1 -     16117 a
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428618 1 + 186847797 a
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                         11020 1 -     20410 a
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                       134 1 -     12674 a
i Trachypithecus_crepusculus.k141_582567                 C 0 I 118
s Trachypithecus_cristatus.k141_580354                       11121 1 +     19930 a
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       7532 1 -     19997 a
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            47672 1 -     60166 a
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        15143 1 -     27529 a
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     15087 1 -     18194 a
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           8799 1 -     21137 a
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    7502 1 -     10723 a
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         6674 1 +      9834 a
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        24987 1 +     32220 a
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5939089 1 +   6242583 a
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        8341 1 +     20839 a
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2155697 1 +   4065304 a
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9350 1 -     10553 A
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
e Echinops_telfairi.JH980293.1                            48780689 3 + 111700974 I
e Mus_pahari.LT608297.1                                   31355125 13 -  89631738 T
e Mus_spretus.CM004101.1                                  90752527 13 - 130317789 T
e Mus_musculus.chr8                                       87650466 13 - 129401213 T
e Mus_caroli.LT608237.1                                   84361468 13 - 120012414 T
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      15000 0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5480 7 +     86975 I
e Xerus_inauris.XerIna_scaffold_2302                          1179 7 +    224448 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 10904 7 -     43706 I
e Vicugna_pacos.KN270157.1                                 5371997 7 -   5488506 I
e Varecia_variegata.k141_1128296                             11582 0 +     24756 C
e Varecia_rubra.k141_590885                                  11523 0 +     50397 C
e Ursus_maritimus.KK499267.1                               4850551 7 -   5085361 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   53362 63 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4293354 3 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     81309 7 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   6516 8 +      8208 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              105556 0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    387336 7 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      118879 7 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 72732 9 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                10912 12 +     41958 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6810881 7 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629              18439 7 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             30850 6 +     97271 I
e Spermophilus_dauricus.KZ294078.1                         1954051 7 -   3870691 I
e Sorex_araneus.JH798187.1                                13651056 93 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               3814 63 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11982 13 -     12148 T
e Scalopus_aquaticus.ScaAqu_scaffold_662                    153257 71 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                87920 4 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570728 13 +  90668790 T
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20274423 7 -  38429054 I
e Pteropus_vampyrus.KN534172.1                                6951 4 -      8028 I
e Pteropus_alecto.KB030862.1                              22976898 4 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         40351 7 +     42204 I
e Pteronotus_parnellii.KE909381.1                            15190 7 -     21811 I
e Psammomys_obesus.NESX01036370.1                            10498 13 -     21651 T
e Propithecus_verreauxi.k141_956661                           4907 5 -      6182 I
e Propithecus_tattersalli.k141_790011                        28684 5 -     67325 I
e Propithecus_perrieri.k141_1200571                           4859 5 -     24134 I
e Propithecus_edwardsi.k141_1176054                          26672 5 +     35766 I
e Propithecus_diadema.k141_58108                              1194 5 -     13098 I
e Propithecus_coronatus.k141_347390                          29151 5 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     990839 5 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2596858 0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                 13455 3 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             1871 11 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     28235 0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18194880 13 -  18517816 T
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12766 7 -     78924 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4721357 7 -   8748460 I
e Panthera_pardus.KV860321.1                                264478 7 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  151269 7 +    230217 I
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       462456 7 -    559221 I
e Orycteropus_afer.OryAfe_flattened_line_144387               9955 3 -     18566 I
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80254 13 +    102263 T
e Ondatra_zibethicus.OndZib_scaffold_46174                   25254 13 +     28053 T
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              506767 7 -   2017862 I
e Octodon_degus.JH651603.1                                  746966 0 +  11899542 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9149508 7 -   9404916 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20307617 7 +  31847680 I
e Nannospalax_galili.KL204047.1                            2034174 0 -   3037898 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189371 9 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_281845                          79 9 +      1835 I
e Myotis_lucifugus.GL429869.1                              3903927 12 -   4330536 I
e Myotis_davidii.KB100139.1                                1587835 12 -   6019432 I
e Myotis_brandtii.KE162005.1                                280573 12 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     71356 0 -     80779 C
e Mustela_putorius.JH418006.1                               301574 7 -  14710649 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5056 0 +     14296 C
e Murina_feae.MurFea_scaffold_85699                           6930 12 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   35536 7 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 141735 7 -    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Mirza_zaza.k141_952172                                      9148 0 -     37649 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         6031 7 -      8324 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             34407 9 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1850726 9 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11260586 13 -  27267610 T
e Micronycteris_hirsuta.MicHir_scaffold_52381                15768 4 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    22438 3 -    145209 I
e Microcebus_murinus.CM007674.1                           18291603 0 -  93316391 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182348 13 -  29670104 T
e Meriones_unguiculatus.MerUng_scaffold_7390                 32854 13 +    140813 T
e Mellivora_capensis.MelCap_flattened_line_69365             10161 7 +     13704 I
e Megaderma_lyra.MegLyr_scaffold_4542                        10443 8 -    207569 I
e Marmota_marmota.CZRN01000018.1                          33103196 7 -  40650429 I
e Manis_pentadactyla.KN006162.1                              50599 7 -    317179 I
e Manis_javanica.JSZB01003497.1                              18609 4 +    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_8222                 90732 4 +     94391 I
e Lycaon_pictus.CM007581.1                                17955440 7 -  59628241 I
e Loxodonta_africana.GL010049.1                            4217433 3 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Leptonychotes_weddellii.KB714746.1                       3043163 7 +   3914936 I
e Lepilemur_septentrionalis.k141_185316                      27069 0 +     54090 C
e Lepilemur_ruficaudatus.k141_121139                          1671 0 +     25010 C
e Lepilemur_dorsalis.k141_577674                             29133 0 +     45836 C
e Lepilemur_ankaranensis.k141_596936                         11072 0 -     23766 C
e Lemur_catta.scaffold_24                                 15524178 0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    16481 10 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276904 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Indri_indri.k141_3655594                                   22621 5 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7520996 7 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      83223 0 +    135385 C
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  45130 7 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                1000 3 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20662334 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               242436 7 +    327341 I
e Hapalemur_occidentalis.k141_907772                         13663 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                         13826 0 -     41752 C
e Hapalemur_griseus.k141_1511508                             13725 0 +     18253 C
e Hapalemur_gilberti.k141_488810                             12086 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           6937 0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32714 0 +     78134 C
e Glis_glis.GliGli_scaffold_19807                            31472 0 +     49224 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Fukomys_damarensis.KN121974.1                             850545 0 +   3816255 C
e Felis_nigripes.FelNig_flattened_line_20823                  9654 7 -     36744 I
e Felis_catus_fca126.CM031415.1                           20195910 7 + 205367284 I
e Eulemur_sanfordi.k141_1122526                              13878 0 +    111500 C
e Eulemur_rufus.k141_1476633                                  4305 0 -     17153 C
e Eulemur_rubriventer.k141_774594                              252 0 +     13026 C
e Eulemur_mongoz.k141_232305                                 10761 0 +     97555 C
e Eulemur_macaco.k141_1562045                                12831 0 +     75513 C
e Eulemur_fulvus.k141_544389                                 14069 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                            12834 0 +     26330 C
e Eulemur_coronatus.k141_885031                              15630 8 -     25546 I
e Eulemur_collaris.k141_377015                                6606 0 -     16928 C
e Eulemur_albifrons.k141_342033                              13892 0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3328282 71 -   7059049 I
e Equus_przewalskii.KK951119.1                               33514 8 +    498745 I
e Equus_caballus.CM000403.2                               18531485 8 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1283665 8 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2145833 13 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16329424 7 -  41312741 I
e Ellobius_talpinus.LOJH01081419.1                             538 13 +      8657 T
e Ellobius_lutescens.LOEQ01008920.1                          20407 13 -    110024 T
e Elephantulus_edwardii.JH947257.1                         1097777 3 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Eidolon_helvum.KE759718.1                                  10639 4 +     11740 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    36511 0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    6163 8 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  673411 8 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8630236 7 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            63648 8 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35877 0 +     51376 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    837190 0 +   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129             28603 7 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_37019               3028 88 -     19598 I
e Cricetulus_griseus.LT883664.1                           11667673 13 + 224834208 T
e Cricetomys_gambianus.CriGam_scaffold_18520                 50299 0 +     63868 C
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          14522 4 -     20389 I
e Condylura_cristata.JH655891.1                           17548142 67 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            173497 9 +    839153 I
e Choloepus_didactylus.ChoDid_scaffold_45914                 18421 8 +     19366 I
e Chinchilla_lanigera.JH722012.1                           1252917 0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           16545 0 +     57038 C
e Cheirogaleus_major.k141_333249                             21180 0 -     52598 C
e Chaetophractus_vellerosus.ChaVel_scaffold_138870             641 8 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2587 8 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     93134 7 +    217609 I
e Castor_canadensis.CasCan_scaffold_2074                    137187 0 +    179628 C
e Carollia_perspicillata.CarPer_scaffold_92756                5224 2 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                    1169 0 -     12242 C
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18500501 7 +  63665305 I
e Canis_lupus_familiaris.chr16                            17958989 218 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9034724 7 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_7008                    185338 0 -    185531 I
e CanFam4.chr16                                           17799210 78 -  60362399 I
e Camelus_ferus.KB017975.1                                  403239 7 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2334955 7 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10002497 7 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              54422 10 +     85213 I
e Avahi_laniger.k141_765380                                  53795 15 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  4870 7 +     43469 I
e Aplodontia_rufa.AprRuf_scaffold_68852                      12720 0 +     20879 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      185462 7 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74603 0 -     89534 C
e Ailurus_fulgens.LNAC01001112.1                             79466 7 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9510690 7 -  29979442 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     70906 13 +     87051 T
e Acinonyx_jubatus.LLWD01001279.1                           827416 7 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       6932  7 +     62944 g--------g----a-----------g-g----ga
s Acinonyx_jubatus.LLWD01001279.1                           827423  3 -   1699592 ---------g----g-----------a--------
i Acinonyx_jubatus.LLWD01001279.1                        I 7 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510697  3 -  29979442 ---------c----g-----------a--------
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 7 C 0
s Ailurus_fulgens.LNAC01001112.1                             79473  3 -    347723 ---------g----g-----------a--------
i Ailurus_fulgens.LNAC01001112.1                         I 7 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     74603  2 -     89534 --------------C-----------A--------
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14758  7 -     52922 g--------g----a-----------a-g----gg
i Allenopithecus_nigroviridis.k141_3361533               C 0 I 103
s Allochrocebus_lhoesti.k141_4309873                         14674  7 -     28001 g--------g----a-----------a-g----gg
i Allochrocebus_lhoesti.k141_4309873                     C 0 I 102
s Allochrocebus_preussi.k141_1442296                          5170  7 -     18505 g--------g----a-----------a-g----gg
i Allochrocebus_preussi.k141_1442296                     C 0 I 104
s Allochrocebus_solatus.k141_166128                           6024  7 -     12518 g--------g----a-----------a-g----gg
i Allochrocebus_solatus.k141_166128                      C 0 I 102
s Alouatta_belzebul.k141_3560514                              7508  7 +     51355 g--------a----a-----------g-g----ga
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                 622  7 -     36483 g--------g----a-----------g-g----ga
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              11273  7 +     28687 a--------g----a-----------g-g----ga
i Alouatta_discolor.k141_566626                          C 0 T 196
s Alouatta_juara.k141_1509701                                24895  7 +     25266 g--------g----a-----------g-g----ga
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_918386                             616  7 -      9457 g--------g----a-----------g-g----ga
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_3472759                            18202  7 -     18578 g--------g----a-----------g-g----ga
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              3791  7 +     47717 g--------g----a-----------g-g----ga
i Alouatta_palliata.k141_2135620                         I 202 T 202
s Alouatta_puruensis.k141_362188                               294  7 +      5663 g--------g----a-----------g-g----ga
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             14955  7 +     50774 g--------g----a-----------g-g----ga
i Alouatta_seniculus.k141_117119                         C 0 I 21
s Anoura_caudifer.AnoCau_scaffold_1412                      185469  3 +    412891 ---------G----A-----------A--------
i Anoura_caudifer.AnoCau_scaffold_1412                   I 7 C 0
s Aotus_azarae.k141_3104676                                  15734  7 -     33861 g--------g----a-----------g-g----aa
i Aotus_azarae.k141_3104676                              I 203 T 207
s Aotus_griseimembra.k141_2240599                            15551  7 -     34016 g--------g----a-----------g-g----ga
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4298158  7 -   5030052 g--------g----a-----------g-g----aa
i Aotus_nancymaae.KZ198451.1                             I 210 T 214
s Aotus_trivirgatus.k141_2152450                             15553  7 -     34685 g--------g----a-----------g-g----ga
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28677  7 -     47192 g--------g----a-----------g-g----ga
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      12720  2 +     20879 --------------G-----------G--------
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       11573  4 +     14667 A--------G----G-----------A--------
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4877  3 +     43469 ---------G----A-----------A--------
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 7 C 0
s Callibella_humilis.k141_1278103                             5554  7 -     10423 g--------a----a-----------a-g----ga
i Callibella_humilis.k141_1278103                        I 264 I 11
s Callimico_goeldii.k141_1091182                             24757  7 +     31915 g--------g----a-----------g-g----ga
i Callimico_goeldii.k141_1091182                         C 0 I 277
s Callithrix_geoffroyi.k119_512088                            5252  7 +      5267 g--------a----a-----------a-g----aa
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590708  7 - 189096842 g--------a----a-----------a-g----ga
i Callithrix_jacchus.pat_scaffold_3                      I 242 I 11
s Callithrix_kuhlii.k119_1164682                             11997  4 -     12001 G--------A----A-----------A--------
i Callithrix_kuhlii.k119_1164682                         C 0 n 0
s Camelus_bactrianus.KN276810.1                           10002504  3 -  17673402 ---------g----g-----------a--------
i Camelus_bactrianus.KN276810.1                          I 7 C 0
s Camelus_dromedarius.KN272107.1                           2334962  3 -   7040546 ---------g----g-----------a--------
i Camelus_dromedarius.KN272107.1                         I 7 C 0
s Camelus_ferus.KB017975.1                                  403246  3 -   1652518 ---------g----g-----------a--------
i Camelus_ferus.KB017975.1                               I 7 C 0
s CanFam4.chr16                                           17799288  3 -  60362399 ---------G----G-----------A--------
i CanFam4.chr16                                          I 78 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                       36  3 -     43241 ---------G----G-----------A--------
i Canis_lupus_VD.CanFam_VD_scaffold_27089                T 16 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034731  3 -   9314153 ---------g----g-----------a--------
i Canis_lupus_dingo.QKWQ01000480.1                       I 7 C 0
s Canis_lupus_familiaris.chr16                            17959207  3 -  59632846 ---------g----g-----------a--------
i Canis_lupus_familiaris.chr16                           I 218 C 0
s Canis_lupus_orion.HG994398.1                            18500508  3 +  63665305 ---------g----g-----------a--------
i Canis_lupus_orion.HG994398.1                           I 7 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1169  2 -     12242 --------------G-----------G--------
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007247396.1                           201471  7 +    308752 g--------g----a-----------a-g----ga
i Carlito_syrichta.NW_007247396.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5226  3 -     11696 ---------G----A-----------A--------
i Carollia_perspicillata.CarPer_scaffold_92756           I 2 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137187  2 +    179628 --------------G-----------G--------
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 2
s Catagonus_wagneri.CatWag_scaffold_2839                     93141  2 +    217609 ---------G----G--------------------
i Catagonus_wagneri.CatWag_scaffold_2839                 I 7 I 43
s Cebuella_niveiventris.k141_1251222                         10189  7 -     11392 g--------a----a-----------a-g----ga
i Cebuella_niveiventris.k141_1251222                     I 278 I 11
s Cebuella_pygmaea.k141_1309012                               6257  7 -      7577 g--------a----a-----------a-g----ga
i Cebuella_pygmaea.k141_1309012                          I 248 I 11
s Cebus_albifrons.Contig27                                25652583 18 +  26074798 g--------g----aagggaaggagga-g----ga
i Cebus_albifrons.Contig27                               C 0 I 343
s Cebus_olivaceus.k141_1764483                                 553  7 +     28840 g--------g----a-----------a-g----ga
i Cebus_olivaceus.k141_1764483                           I 1 I 322
s Cebus_unicolor.k141_1837183                                  279 11 +     14051 g-a-g-aa-g----a-----------a-g----ga
i Cebus_unicolor.k141_1837183                            I 1 I 317
s Cephalopachus_bancanus.k141_1423433                         5476  7 +     31688 g--------g----a-----------a-g----ga
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12231568  3 +  27778364 ---------g----g-----------a--------
i Ceratotherium_simum.JH767749.1                         I 8 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2595  3 -     25243 ---------G----G-----------A--------
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 8 C 0
s Cercocebus_atys.KQ010504.1                               4475679  7 +   4669795 g--------g----a-----------a-g----gg
i Cercocebus_atys.KQ010504.1                             C 0 I 112
s Cercocebus_chrysogaster.k141_393940                        14224  7 -     19203 g--------g----a-----------a-g----gg
i Cercocebus_chrysogaster.k141_393940                    C 0 I 10
s Cercocebus_lunulatus.k141_3342297                            840  7 -     14043 g--------g----a-----------a-g----gg
i Cercocebus_lunulatus.k141_3342297                      C 0 I 112
s Cercocebus_torquatus.k141_3057011                           8876  7 +     27781 g--------g----a-----------a-g----gg
i Cercocebus_torquatus.k141_3057011                      C 0 I 109
s Cercopithecus_ascanius.k141_1024104                         9045  7 -     20310 g--------g----a-----------a-g----gg
i Cercopithecus_ascanius.k141_1024104                    C 0 I 104
s Cercopithecus_cephus.k141_1078548                          12024  7 +     29689 g--------g----a-----------a-g----gg
i Cercopithecus_cephus.k141_1078548                      C 0 I 105
s Cercopithecus_diana.k141_1150327                            6778  7 -     20078 g--------g----a-----------a-g----gg
i Cercopithecus_diana.k141_1150327                       C 0 I 104
s Cercopithecus_hamlyni.k141_187466                          14701  7 -     27936 g--------g----a-----------a-g----gg
i Cercopithecus_hamlyni.k141_187466                      C 0 I 98
s Cercopithecus_lowei.k141_1854285                            3565  7 -     17152 g--------g----a-----------a-g----gg
i Cercopithecus_lowei.k141_1854285                       C 0 I 104
s Cercopithecus_albogularis.ctg5                                38817104  7 +  39242232 g--------g----a-----------a-g----gg
i Cercopithecus_albogularis.ctg5                               C 0 I 104
s Cercopithecus_mona.ctg39                                21222796  7 -  21565898 g--------g----a-----------a-g----gg
i Cercopithecus_mona.ctg39                               C 0 I 104
s Cercopithecus_neglectus.k141_2526306                       39914  7 -     53127 g--------g----a-----------a-g----gg
i Cercopithecus_neglectus.k141_2526306                   C 0 I 104
s Cercopithecus_nictitans.k141_1119862                         165  7 +     13442 g--------g----a-----------a-g----gg
i Cercopithecus_nictitans.k141_1119862                   C 0 I 104
s Cercopithecus_petaurista.k141_807961                       14714  7 -     27947 g--------g----a-----------a-g----gg
i Cercopithecus_petaurista.k141_807961                   C 0 I 104
s Cercopithecus_pogonias.k141_822820                         14690  7 +     17596 g--------g----a-----------a-g----gg
i Cercopithecus_pogonias.k141_822820                     C 0 I 104
s Cercopithecus_roloway.k141_2581234                           737  7 +     14005 g--------g----a-----------a-g----gg
i Cercopithecus_roloway.k141_2581234                     C 0 I 104
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             649  3 -      8501 ---------A----A-----------A--------
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       I 8 C 0
s Chinchilla_lanigera.JH722012.1                           1252917  2 +   2543920 --------------g-----------c--------
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2206961                            236  7 -     15524 g--------g----a-----------a-g----ga
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18428674  7 -  18827391 g--------g----a-----------a-g----gg
i Chlorocebus_aethiops.ctg25                             C 0 I 104
s Chlorocebus_pygerythrus.k141_1025673                       15111  7 -     50209 g--------g----a-----------a-g----gg
i Chlorocebus_pygerythrus.k141_1025673                   C 0 I 104
s Chlorocebus_sabaeus.CM001947.1                         135422111  7 + 135778131 g--------g----a-----------a-g----gg
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 104
s Choloepus_didactylus.ChoDid_scaffold_45914                 18429  3 +     19366 ---------G----A-----------A--------
i Choloepus_didactylus.ChoDid_scaffold_45914             I 8 C 0
s Choloepus_hoffmanni.KN194906.1                            173506  3 +    839153 ---------g----a-----------a--------
i Choloepus_hoffmanni.KN194906.1                         I 9 C 0
s Colobus_angolensis.KN981557.1                            1910620  7 +   2368649 g--------g----a-----------a-g----gg
i Colobus_angolensis.KN981557.1                          C 0 I 107
s Colobus_guereza.LG01                                   199948979  7 + 200372422 G--------G----A-----------G-G----AA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37154  7 +     84244 g--------g----a-----------a-g----gg
i Colobus_polykomos.k141_906115                          C 0 I 107
s Condylura_cristata.JH655891.1                           17548209  3 -  53390261 ---------g----g-----------a--------
i Condylura_cristata.JH655891.1                          I 67 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14526  4 -     20389 ---------A----G----------AA--------
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 4 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 50299  2 +     63868 --------------A-----------A--------
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 8
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28610  3 -     87169 ---------G----G-----------A--------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 7 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837190  1 +   1526836 --------------------------G--------
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35877  2 +     51376 --------------G-----------G--------
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            63656  3 +   2246927 ---------a----a-----------a--------
i Dasypus_novemcinctus.JH564415.1                        I 8 C 0
s Daubentonia_madagascariensis.ctg71                      12537400  4 -  12879189 A--------G----G-----------A--------
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630243  3 +  20541912 ---------g----a-----------c--------
i Desmodus_rotundus.KZ672289.1                           I 7 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673419  3 +   1390856 ---------G----g-----------a--------
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 8 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6171  3 +    198055 ---------G----G-----------A--------
i Diceros_bicornis.DicBicMic_scaffold_5955               I 8 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36511  2 +     67921 --------------G-----------G--------
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Echinops_telfairi.JH980293.1                            48780692  1 + 111700974 --------------------------a--------
i Echinops_telfairi.JH980293.1                           I 3 C 0
s Eidolon_helvum.KE759718.1                                  10643  4 +     11740 ---------a----ga----------a--------
i Eidolon_helvum.KE759718.1                              I 4 C 0
s Elephantulus_edwardii.JH947257.1                         1097780  1 +  10337057 --------------------------a--------
i Elephantulus_edwardii.JH947257.1                       I 3 C 0
s Enhydra_lutris.KZ291758.1                               16329431  3 -  41312741 ---------g----g-----------a--------
i Enhydra_lutris.KZ291758.1                              I 7 C 0
s Eptesicus_fuscus.JH977646.1                              2145846  3 -  14770903 ---------g----g-----------a--------
i Eptesicus_fuscus.JH977646.1                            I 13 C 0
s Equus_asinus.JREZ01000139.1                              1283673  3 +   4378816 ---------g----g-----------a--------
i Equus_asinus.JREZ01000139.1                            I 8 C 0
s Equus_caballus.CM000403.2                               18531493  3 -  39960074 ---------g----g-----------a--------
i Equus_caballus.CM000403.2                              I 8 C 0
s Equus_przewalskii.KK951119.1                               33522  3 +    498745 ---------g----g-----------a--------
i Equus_przewalskii.KK951119.1                           I 8 C 0
s Erinaceus_europaeus.JH835339.1                           3328353  1 -   7059049 ---------a-------------------------
i Erinaceus_europaeus.JH835339.1                         I 71 C 0
s Erythrocebus_patas.Contig38                             21205281  7 -  21539334 g--------g----a-----------a-g----gg
i Erythrocebus_patas.Contig38                            C 0 I 102
s Felis_catus.CM001381.2                                  20237074  3 + 206538554 ---------g----g-----------a--------
i Felis_catus.CM001381.2                                 I 7 C 0
s Felis_catus_fca126.CM031415.1                           20195917  3 + 205367284 ---------g----g-----------a--------
i Felis_catus_fca126.CM031415.1                          I 7 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  9661  3 -     36744 ---------G----G-----------A--------
i Felis_nigripes.FelNig_flattened_line_20823             I 7 C 0
s Fukomys_damarensis.KN121974.1                             850545  2 +   3816255 --------------g-----------g--------
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg2040                                     426716  4 -    453645 A--------G----G-----------A--------
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4406  4 +     11339 a--------g----g-----------a--------
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            1704  4 +     41679 A--------G----G-----------A--------
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1301  4 -      9135 a--------g----a-----------g--------
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              16075  7 -     32273 g--------g----a-----------a-a----ga
i Gorilla_beringei.k141_3596273                          C 0 I 112
s Gorilla_gorilla.LT578341.1                             186338213  7 + 186649187 g--------g----a-----------a-a----ga
i Gorilla_gorilla.LT578341.1                             C 0 I 111
s Helogale_parvula.HelPar_flattened_line_2585               242443  3 +    327341 ---------G----G-----------A--------
i Helogale_parvula.HelPar_flattened_line_2585            I 7 C 0
s Heterocephalus_glaber.JH602082.1                        20662334  2 +  22651954 --------------G-----------G--------
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1003  3 +      7595 ---------T----A-----------A--------
i Heterohyrax_brucei.HetBruBak_scaffold_122365           I 3 C 0
s Hoolock_leuconedys.ctg274                                    434986  7 +    630532 g--------g----a-----------g-g----ga
i Hoolock_leuconedys.ctg274                                 I 99 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45137  3 +     55795 ---------G----G-----------A--------
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 7 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83223  2 +    135385 --------------G-----------G--------
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Jaculus_jaculus.JH725527.1                               8276904  2 -   9596543 --------------C-----------A--------
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    16491  3 -     42476 ---------G----G-----------A--------
i Lasiurus_borealis.LasBor_scaffold_32767                I 10 C 0
s Leontocebus_fuscicollis.k141_1820339                        7833  7 +     64341 g--------a----a-----------a-g----ga
i Leontocebus_fuscicollis.k141_1820339                   I 264 I 11
s Leontocebus_illigeri.k141_3350179                           4892  7 +      4941 g--------g----a-----------g-g----ga
i Leontocebus_illigeri.k141_3350179                      C 0 I 3
s Leontocebus_nigricollis.k141_4610752                        7610  7 +     35603 g--------g----a-----------g-g----ga
i Leontocebus_nigricollis.k141_4610752                   C 0 I 262
s Leontopithecus_chrysomelas.k141_1519602                    29277  7 +     38576 g--------a----a-----------a-g----ga
i Leontopithecus_chrysomelas.k141_1519602                C 0 I 11
s Leontopithecus_rosalia.k141_464620                         25977  7 +     66356 g--------a----a-----------a-g----ga
i Leontopithecus_rosalia.k141_464620                     C 0 I 11
s Leptonychotes_weddellii.KB714746.1                       3043170  3 +   3914936 ---------g----g-----------a--------
i Leptonychotes_weddellii.KB714746.1                     I 7 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6590  4 -     14121 a--------g----a-----------g--------
i Lepus_americanus.LepAme_scaffold_107385                I 5 C 0
s Lophocebus_aterrimus.ctg367                              1437218 11 +   1826925 ggaag----g----a-----------a-g----gg
i Lophocebus_aterrimus.ctg367                            C 0 I 114
s Loris_lydekkerianus.k141_2539221                            5965  4 +     11245 A--------G----G-----------A--------
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004785  4 +   6120653 A--------G----G-----------A--------
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4217436  3 -  43346337 ---------a----a-----------a--------
i Loxodonta_africana.GL010049.1                          I 3 C 0
s Lycaon_pictus.CM007581.1                                17955447  3 -  59628241 ---------N----N-----------N--------
i Lycaon_pictus.CM007581.1                               I 7 C 0
s Macaca_arctoides.k141_2326796                               7044  7 +     40492 g--------g----a-----------a-g----gg
i Macaca_arctoides.k141_2326796                          C 0 I 104
s Macaca_assamensis.Contig5                               59676303  7 +  60120075 g--------g----a-----------a-g----gg
i Macaca_assamensis.Contig5                              C 0 I 104
s Macaca_cyclopis.k119_18836                                 12816  7 -     26193 G--------G----A-----------a-g----gg
i Macaca_cyclopis.k119_18836                             C 0 I 107
s Macaca_fascicularis.k141_814140                            80600  7 -    114318 g--------g----a-----------a-g----gg
i Macaca_fascicularis.k141_814140                        C 0 I 107
s Macaca_fuscata.k119_255327                                  6291  7 -     23192 g--------g----a-----------a-g----gg
i Macaca_fuscata.k119_255327                             C 0 I 103
s Macaca_leonina.k141_3550399                                15760  7 -     29190 g--------g----a-----------a-g----gg
i Macaca_leonina.k141_3550399                            C 0 I 107
s Macaca_maura.k141_2733130                                  24325  7 +     37952 g--------g----a-----------a-g----gg
i Macaca_maura.k141_2733130                              C 0 I 107
s Macaca_mulatta.NC_041758.1                             186839414  7 + 187317192 g--------g----a-----------a-g----gg
i Macaca_mulatta.NC_041758.1                             C 0 I 107
s Macaca_nemestrina.KQ007038.1                            25457977  7 -  25927173 g--------g----a-----------a-g----gg
i Macaca_nemestrina.KQ007038.1                           C 0 I 107
s Macaca_nigra.k141_1655396                                  80173  7 +     89720 g--------g----a-----------a-g----gg
i Macaca_nigra.k141_1655396                              C 0 I 107
s Macaca_radiata.k141_3680011                                 7174  7 +     20474 g--------g----a-----------a-g----gg
i Macaca_radiata.k141_3680011                            C 0 I 107
s Macaca_siberu.k141_635500                                   6974  7 -     14993 g--------g----a-----------a-g----gg
i Macaca_siberu.k141_635500                              C 0 I 107
s Macaca_silenus.Contig273                                  329840  7 -    668171 g--------g----a-----------a-g----gg
i Macaca_silenus.Contig273                               C 0 I 107
s Macaca_thibetana.k99_256239                                 5290  7 -     24072 g--------g----a-----------a-g----gg
i Macaca_thibetana.k99_256239                            C 0 I 104
s Macaca_tonkeana.k141_1498238                               25912  7 -     45290 g--------g----a-----------a-g----gg
i Macaca_tonkeana.k141_1498238                           C 0 I 107
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90736  4 +     94391 ---------A----G----------AA--------
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 4 C 0
s Mandrillus_leucophaeus.scaffold280                      23937499  7 -  24302211 g--------g----a-----------a-g----gg
i Mandrillus_leucophaeus.scaffold280                     C 0 I 112
s Mandrillus_sphinx.Contig270                               351624  6 +    752769 ---------g----a-----------a-g----gg
i Mandrillus_sphinx.Contig270                            T 107 I 112
s Manis_javanica.JSZB01003497.1                              18613  3 +    737560 ---------g----g-----------a--------
i Manis_javanica.JSZB01003497.1                          I 4 C 0
s Manis_pentadactyla.KN006162.1                              50606  3 -    317179 ---------a----g-----------a--------
i Manis_pentadactyla.KN006162.1                          I 7 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        10451  4 -    207569 ---------A----G----------GA--------
i Megaderma_lyra.MegLyr_scaffold_4542                    I 8 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10168  3 +     13704 ---------G----G-----------A--------
i Mellivora_capensis.MelCap_flattened_line_69365         I 7 C 0
s Mico_argentatus.k141_1239457                                6068  7 -      7380 g--------a----a-----------a-g----ga
i Mico_argentatus.k141_1239457                           I 242 I 11
s Mico_humeralifer.k141_2457295                                297  7 +      1079 g--------a----a-----------a-g----ga
i Mico_humeralifer.k141_2457295                          I 6 I 11
s Mico_schneideri.k141_1950671                                      6080  7 -      7356 g--------a----a-----------a-g----ga
i Mico_schneideri.k141_1950671                                 I 242 I 11
s Microgale_talazaci.MicTal_scaffold_6613                    22441  1 -    145209 --------------------------A--------
i Microgale_talazaci.MicTal_scaffold_6613                I 3 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                15772  1 -     19307 --------------------------A--------
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 4 C 0
s Miopithecus_ogouensis.k141_534055                           9212  7 -     28506 g--------g----a-----------a-g----gg
i Miopithecus_ogouensis.k141_534055                      C 0 I 103
s Mirounga_angustirostris.MirAng_flattened_line_93702         6038  3 -      8324 ---------G----G-----------A--------
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 7 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141742  3 -    366855 ---------G----G-----------A--------
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 7 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35543  3 +     37127 ---------G----G-----------A--------
i Mungos_mungo.MunMun_flattened_line_23663               I 7 C 0
s Murina_feae.MurFea_scaffold_85699                           6942  3 +     14753 ---------A----G-----------A--------
i Murina_feae.MurFea_scaffold_85699                      I 12 C 0
s Mustela_putorius.JH418006.1                               301581  3 -  14710649 ---------g----g-----------a--------
i Mustela_putorius.JH418006.1                            I 7 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71356  2 -     80779 --------------G-----------G--------
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                280585  3 -  10118263 ---------g----g-----------a--------
i Myotis_brandtii.KE162005.1                             I 12 C 0
s Myotis_davidii.KB100139.1                                1587847  6 -   6019432 ---------ga-aag-----------a--------
i Myotis_davidii.KB100139.1                              I 12 C 0
s Myotis_lucifugus.GL429869.1                              3903939  3 -   4330536 ---------g----g-----------a--------
i Myotis_lucifugus.GL429869.1                            I 12 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                          88  3 +      1835 ---------G----G-----------A--------
i Myotis_myotis.MyoMyo_scaffold_281845                   I 9 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189380  3 +    196477 ---------A----A-----------A--------
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 9 C 0
s Nannospalax_galili.KL204047.1                            2034174  2 -   3037898 --------------A-----------A--------
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               15207  7 +     21681 g--------g----a-----------a-g----gg
i Nasalis_larvatus.k141_413338                           C 0 I 111
s Neomonachus_schauinslandi.NINY01007730.1                20307624  3 +  31847680 ---------g----g-----------a--------
i Neomonachus_schauinslandi.NINY01007730.1               I 7 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149515  3 -   9404916 ---------g----g-----------a--------
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 7 C 0
s Nycticebus_bengalensis.LG01                            102586329  4 - 196305487 A--------G----G-----------A--------
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              253  4 +      2075 a--------g----g-----------a--------
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761683  4 + 199412804 A--------G----G-----------A--------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1363655  4 +   3988456 a--------g----a-----------g--------
i Ochotona_princeps.JH802162.1                           I 14 C 0
s Octodon_degus.JH651603.1                                  746966  2 +  11899542 --------------A-----------G--------
i Octodon_degus.JH651603.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9958  1 -     18566 --------------------------A--------
i Orycteropus_afer.OryAfe_flattened_line_144387          I 3 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147449  4 + 174332312 a--------g----a-----------g--------
i Oryctolagus_cuniculus.CM000791.1                       I 5 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462463  3 -    559221 ---------g----g-----------a--------
i Otocyon_megalotis.JAEUCK010005147.1                    I 7 C 0
s Otolemur_crassicaudatus.k141_222918                         4236  4 +      8798 A--------G----G-----------A--------
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696399  4 -   1103335 a--------g----g-----------a--------
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    44275  7 +     80009 g--------g----a-----------g-g----ga
i Pan_paniscus.KQ411613.1                                I 111 C 0
s Pan_troglodytes.CM009242.2                             189143177  7 + 189151597 g--------g----a-----------g-g----ga
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  151276  3 +    230217 ---------G----G-----------A--------
i Panthera_onca.PanOnc_flattened_line_3271               I 7 C 0
s Panthera_pardus.KV860321.1                                264485  3 +  18783137 ---------g----g-----------a--------
i Panthera_pardus.KV860321.1                             I 7 C 0
s Panthera_tigris.KE722367.1                               4721364  3 -   8748460 ---------g----g-----------a--------
i Panthera_tigris.KE722367.1                             I 7 C 0
s Papio_anubis.CM001495.2                                183443297 11 + 183742232 ggaag----g----a-----------a-g----gg
i Papio_anubis.CM001495.2                                C 0 I 112
s Papio_cynocephalus.k141_4307930                             6947  7 +     20448 g--------g----a-----------a-g----gg
i Papio_cynocephalus.k141_4307930                        C 0 I 112
s Papio_hamadryas.Contig39                                20563755 11 +  20919399 ggaag----g----a-----------a-g----gg
i Papio_hamadryas.Contig39                               C 0 I 112
s Papio_kindae.k141_1936966                                   5691  7 +     41871 g--------g----a-----------a-g----gg
i Papio_kindae.k141_1936966                              C 0 I 112
s Papio_papio.k141_802527                                     8976 15 +     27711 ggaaggaagg----a-----------a-g----gg
i Papio_papio.k141_802527                                C 0 I 112
s Papio_ursinus.k141_3428135                                  9049 11 +      9205 ggaag----g----a-----------a-g----gg
i Papio_ursinus.k141_3428135                             C 0 I 112
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12773  3 -     78924 ---------G----G-----------A--------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 7 C 0
s Perodicticus_ibeanus.k141_855320                           10217  4 +     13100 A--------G----G-----------A--------
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8623  4 +     25941 A--------G----G-----------A--------
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28235  2 -     29689 --------------A-----------G--------
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Piliocolobus_badius.k141_1234363                           43702  7 +     62158 g--------g----a-----------a-g----gg
i Piliocolobus_badius.k141_1234363                       C 0 I 107
s Piliocolobus_gordonorum.k141_381342                        38449  7 +     89929 g--------g----a-----------a-g----gg
i Piliocolobus_gordonorum.k141_381342                    C 0 I 107
s Piliocolobus_kirkii.k141_448987                            39865  7 +     51399 g--------g----a-----------a-g----gg
i Piliocolobus_kirkii.k141_448987                        C 0 I 107
s Piliocolobus_tephrosceles.PDMG02000141.1                14296103  7 -  14605196 g--------g----a-----------a-g----gg
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 107
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1882  3 +     22620 ---------G----G-----------A--------
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 11 C 0
s Pongo_abelii.CM009266.2                                189131313  7 + 189387572 g--------g----a-----------a-g----ga
i Pongo_abelii.CM009266.2                                I 107 C 0
s Pongo_pygmaeus.ctg66                                     9570920  7 +   9816681 g--------g----a-----------a-g----ga
i Pongo_pygmaeus.ctg66                                   I 106 C 0
s Presbytis_comata.k141_677006                               73383  7 -     81375 g--------g----a-----------a-g----gg
i Presbytis_comata.k141_677006                           C 0 I 111
s Presbytis_mitrata.k141_1087752                              5203  7 +     19060 g--------g----a-----------a-g----gg
i Presbytis_mitrata.k141_1087752                         C 0 I 111
s Procavia_capensis.ProCapCap_scaffold_85530                 13458  3 -     22811 ---------T----A-----------A--------
i Procavia_capensis.ProCapCap_scaffold_85530             I 3 C 0
s Pteronotus_parnellii.KE909381.1                            15197  3 -     21811 ---------a----g-----------a--------
i Pteronotus_parnellii.KE909381.1                        I 7 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40358  3 +     42204 ---------G----G-----------A--------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 7 C 0
s Pteropus_alecto.KB030862.1                              22976902  4 +  28871421 ---------a----ga----------a--------
i Pteropus_alecto.KB030862.1                             I 4 C 0
s Pteropus_vampyrus.KN534172.1                                6955  4 -      8028 ---------a----ga----------a--------
i Pteropus_vampyrus.KN534172.1                           I 4 C 0
s Puma_concolor.QAVW01001104.1                            20274430  3 -  38429054 ---------g----g-----------a--------
i Puma_concolor.QAVW01001104.1                           I 7 C 0
s Pygathrix_cinerea.k141_1153803                             15216  7 -     91421 g--------g----a-----------a-g----gg
i Pygathrix_cinerea.k141_1153803                         C 0 I 111
s Pygathrix_nigripes_b.ctg100                                 7609336  7 +   7812017 g--------g----a-----------a-g----gg
i Pygathrix_nigripes_b.ctg100                               C 0 I 111
s Pygathrix_nigripes_a.k141_215492                             15188  7 -     72585 g--------g----a-----------a-g----gg
i Pygathrix_nigripes_a.k141_215492                         C 0 I 111
s Rhinopithecus_bieti.k119_217274                             6901  7 -     11128 g--------g----a-----------a-g----gg
i Rhinopithecus_bieti.k119_217274                        T 109 I 109
s Rhinopithecus_roxellana.NC_044550.1                     91236254  7 - 195417433 g--------g----a-----------a-g----gg
i Rhinopithecus_roxellana.NC_044550.1                    T 105 I 105
s Rhinopithecus_strykeri.ctg102                            7671906  7 +   7961872 g--------g----a-----------a-g----gg
i Rhinopithecus_strykeri.ctg102                          T 109 I 109
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87924  4 -     96226 ---------A----G----------AA--------
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 4 C 0
s Saguinus_bicolor.k141_8081                                   449  7 +     42994 g--------a----a-----------a-g----ga
i Saguinus_bicolor.k141_8081                             C 0 I 11
s Saguinus_imperator.k141_57697                                234  7 +      1030 g--------a----a-----------a-g----ga
i Saguinus_imperator.k141_57697                          C 0 I 11
s Saguinus_inustus.k141_699149                               13623  7 +     13640 g--------g----a-----------g-g----ga
i Saguinus_inustus.k141_699149                           C 0 n 0
s Saguinus_labiatus.k141_285685                               8492  7 +      8564 g--------g----a-----------a-g----ga
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469800  7 + 209938924 g--------a----a-----------a-g----ga
i Saguinus_midas.LG03                                    C 0 I 11
s Saguinus_mystax.k141_374627                                 8048  7 -      9399 g--------g----a-----------g-g----ga
i Saguinus_mystax.k141_374627                            C 0 I 398
s Saimiri_boliviensis.NW_024100920.1                     119951177  7 - 121099817 g--------a----a-----------a-g----ga
i Saimiri_boliviensis.NW_024100920.1                     I 283 I 7
s Saimiri_cassiquiarensis.k141_2188234                       23516  7 +     46362 g--------a----a-----------a-g----ga
i Saimiri_cassiquiarensis.k141_2188234                   I 166 I 7
s Saimiri_macrodon.k141_716185                               23611  7 +     45824 g--------a----a-----------a-g----ga
i Saimiri_macrodon.k141_716185                           I 166 I 7
s Saimiri_oerstedii.k141_1487881                             40290  7 -     64574 g--------a----a-----------a-g----ga
i Saimiri_oerstedii.k141_1487881                         I 217 I 7
s Saimiri_sciureus.k141_2278166                               3362  7 -     23631 g--------a----a-----------a-g----ga
i Saimiri_sciureus.k141_2278166                          I 283 I 7
s Saimiri_ustus.k141_1484609                                 23507  7 -     61129 g--------a----a-----------a-g----ga
i Saimiri_ustus.k141_1484609                             I 166 I 7
s Sapajus_apella.ctg103                                    5420780  7 -   5703754 g--------g----a-----------a-g----ga
i Sapajus_apella.ctg103                                  C 0 I 112
s Sapajus_macrocephalus.k141_351809                          56118 11 -     80660 g--------a----a-----------a-ggagcga
i Sapajus_macrocephalus.k141_351809                      I 296 I 11
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153328  3 -    313613 ---------G----A-----------A--------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 71 C 0
s Semnopithecus_entellus.k141_11662                          19725  8 -     19888 G--------G----A-----------AGG----GA
i Semnopithecus_entellus.k141_11662                      C 0 I 2
s Semnopithecus_hypoleucos.k141_1615806                      26930  8 +     39453 g--------g----a-----------agg----ga
i Semnopithecus_hypoleucos.k141_1615806                  C 0 I 110
s Semnopithecus_johnii.k141_670120                            7449  8 +     27826 g--------g----a-----------agg----ga
i Semnopithecus_johnii.k141_670120                       C 0 I 109
s Semnopithecus_priam.k141_638794                             6970  8 -     19483 g--------g----a-----------agg----ga
i Semnopithecus_priam.k141_638794                        C 0 I 110
s Semnopithecus_schistaceus.k141_1584426                      7036  8 +      7198 g--------g----a-----------agg----ga
i Semnopithecus_schistaceus.k141_1584426                 I 12 n 112
s Semnopithecus_vetulus.k141_1200928                         15296  8 +     15514 g--------g----a-----------agg----ga
i Semnopithecus_vetulus.k141_1200928                     I 12 n 117
s Solenodon_paradoxus.SolPar_flattened_line_126               3877  3 +   1910179 ---------A----G-----------A--------
i Solenodon_paradoxus.SolPar_flattened_line_126          I 63 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30856  3 +     97271 ---------G----G-----------A--------
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 6 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              18446  3 -    196729 ---------G----G-----------A--------
i Suricata_suricatta.SurSur_flattened_line_6629          I 7 C 0
s Sus_scrofa.CM000828.4                                    6810888  3 +  69701581 ---------g----g-----------a--------
i Sus_scrofa.CM000828.4                                  I 7 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                10924  3 +     41958 ---------G----G-----------G--------
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 12 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72741  3 +    116680 ---------A----A-----------A--------
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 9 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118886  3 -    156842 ---------G----G-----------G--------
i Tapirus_indicus.TapInd_scaffold_9301                   I 7 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387343  3 +    539355 ---------G----G-----------A--------
i Tapirus_terrestris.TapTer_scaffold_755                 I 7 C 0
s Tarsius_lariang.k141_2201908                               26587  7 +     70052 g--------g----a-----------g-a----ga
i Tarsius_lariang.k141_2201908                           I 109 C 0
s Tarsius_wallacei.k141_254427                                1384  7 -     16117 g--------g----a-----------g-a----Ga
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428619  7 + 186847797 g--------g----a-----------a-g----gg
i Theropithecus_gelada.CM009954.1                        C 0 I 112
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105556  2 +    114563 --------------G-----------G--------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   6524  4 +      8208 ---------A----A----------AA--------
i Tolypeutes_matacus.TolMat_scaffold_228639              I 8 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81316  3 +    610378 ---------G----A-----------A--------
i Tonatia_saurophila.TonSau_scaffold_294                 I 7 C 0
s Trachypithecus_auratus.k141_722599                         11021  7 -     20410 g--------g----a-----------a-g----gg
i Trachypithecus_auratus.k141_722599                     C 0 I 111
s Trachypithecus_crepusculus.k141_479585                       135  7 -     15813 g--------g----a-----------a-g----ga
i Trachypithecus_crepusculus.k141_479585                 T 7 n 118
s Trachypithecus_cristatus.k141_580354                       11122  7 +     19930 g--------g----a-----------a-g----gg
i Trachypithecus_cristatus.k141_580354                   C 0 I 111
s Trachypithecus_francoisi.k141_1412647                       7533  7 -     19997 g--------g----a-----------a-g----gg
i Trachypithecus_francoisi.k141_1412647                  C 0 I 111
s Trachypithecus_geei.k141_277701                            47673  7 -     60166 g--------g----a-----------a-g----gg
i Trachypithecus_geei.k141_277701                        C 0 I 110
s Trachypithecus_germaini.k141_912491                        15144  7 -     27529 g--------g----a-----------a-g----gg
i Trachypithecus_germaini.k141_912491                    C 0 I 111
s Trachypithecus_hatinhensis.k141_143409                     15088  7 -     18194 g--------g----a-----------a-g----ag
i Trachypithecus_hatinhensis.k141_143409                 C 0 I 111
s Trachypithecus_laotum.k141_907409                           8800  7 -     21137 g--------g----a-----------a-g----gg
i Trachypithecus_laotum.k141_907409                      C 0 I 111
s Trachypithecus_leucocephalus.k141_587342                    7503  7 -     10723 g--------g----a-----------a-g----gg
i Trachypithecus_leucocephalus.k141_587342               C 0 I 111
s Trachypithecus_melamera.k141_434728                         6675  7 +      9834 g--------g----a-----------a-g----gg
i Trachypithecus_melamera.k141_434728                    C 0 I 111
s Trachypithecus_obscurus.k141_190785                        24988  7 +     32220 g--------g----a-----------a-g----gg
i Trachypithecus_obscurus.k141_190785                    C 0 I 111
s Trachypithecus_phayrei.ctg124                            5939090  7 +   6242583 g--------g----a-----------a-g----gg
i Trachypithecus_phayrei.ctg124                          C 0 I 111
s Trachypithecus_pileatus.k141_2007326                        8342  7 +     20839 g--------g----a-----------a-g----gg
i Trachypithecus_pileatus.k141_2007326                   C 0 I 110
s Trichechus_manatus.JH594705.1                            4293357  3 +  10818551 ---------a----a-----------a--------
i Trichechus_manatus.JH594705.1                          I 3 C 0
s Tupaia_chinensis.KB320699.1                              2155698  4 +   4065304 a--------g----g-----------g--------
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9351  4 -     10553 A--------G----G-----------A--------
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   53425  3 -     77625 ---------A----T-----------A--------
i Uropsilus_gracilis.UroGra_scaffold_12083               I 63 C 0
s Ursus_maritimus.KK499267.1                               4850558  3 -   5085361 ---------g----g-----------a--------
i Ursus_maritimus.KK499267.1                             I 7 C 0
s Vicugna_pacos.KN270157.1                                 5372004  3 -   5488506 ---------g----g-----------a--------
i Vicugna_pacos.KN270157.1                               I 7 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10911  3 -     43706 ---------G----G-----------A--------
i Vulpes_lagopus.VulLag_flattened_line_30954             I 7 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          5487  3 +     86975 ---------g----g-----------a--------
i Zalophus_californianus.ZalCal_flattened_line_17732     I 7 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      15000  2 +     63895 --------------C-----------A--------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Mus_pahari.LT608297.1                                   31355125 13 -  89631738 T
e Mus_spretus.CM004101.1                                  90752527 13 - 130317789 T
e Mus_musculus.chr8                                       87650466 13 - 129401213 T
e Mus_caroli.LT608237.1                                   84361468 13 - 120012414 T
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Xerus_inauris.XerIna_scaffold_2302                          1179  7 +    224448 I
e Varecia_variegata.k141_1128296                             11582  0 +     24756 C
e Varecia_rubra.k141_590885                                  11523  0 +     50397 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spermophilus_dauricus.KZ294078.1                         1954051  7 -   3870691 I
e Sorex_araneus.JH798187.1                                13651056 93 -  18376816 I
e Sigmodon_hispidus.SigHis_scaffold_60841                    11982 13 -     12148 T
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570728 13 +  90668790 T
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Psammomys_obesus.NESX01036370.1                            10498 13 -     21651 T
e Propithecus_verreauxi.k141_956661                           4907  5 -      6182 I
e Propithecus_tattersalli.k141_790011                        28684  5 -     67325 I
e Propithecus_perrieri.k141_1200571                           4859  5 -     24134 I
e Propithecus_edwardsi.k141_1176054                          26672  5 +     35766 I
e Propithecus_diadema.k141_58108                              1194  5 -     13098 I
e Propithecus_coronatus.k141_347390                          29151  5 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     990839  5 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2596858  0 -   4620579 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Peromyscus_maniculatus.KI615324.1                       18194880 13 -  18517816 T
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80254 13 +    102263 T
e Ondatra_zibethicus.OndZib_scaffold_46174                   25254 13 +     28053 T
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              506767  7 -   2017862 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              5056  0 +     14296 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Mirza_zaza.k141_952172                                      9148  0 -     37649 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             34407  9 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1850726  9 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11260586 13 -  27267610 T
e Microcebus_murinus.CM007674.1                           18291603  0 -  93316391 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182348 13 -  29670104 T
e Meriones_unguiculatus.MerUng_scaffold_7390                 32854 13 +    140813 T
e Marmota_marmota.CZRN01000018.1                          33103196  7 -  40650429 I
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lepilemur_septentrionalis.k141_185316                      27069  0 +     54090 C
e Lepilemur_ruficaudatus.k141_121139                          1671  0 +     25010 C
e Lepilemur_dorsalis.k141_577674                             29133  0 +     45836 C
e Lepilemur_ankaranensis.k141_596936                         11072  0 -     23766 C
e Lemur_catta.scaffold_24                                 15524178  0 -  30322482 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Indri_indri.k141_3655594                                   22621  5 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7520996  7 -   7955117 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Hapalemur_occidentalis.k141_907772                         13663  0 -     16460 C
e Hapalemur_meridionalis.k141_248335                         13826  0 -     41752 C
e Hapalemur_griseus.k141_1511508                             13725  0 +     18253 C
e Hapalemur_gilberti.k141_488810                             12086  0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           6937  0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32714  0 +     78134 C
e Glis_glis.GliGli_scaffold_19807                            31472  0 +     49224 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Eulemur_sanfordi.k141_1122526                              13878  0 +    111500 C
e Eulemur_rufus.k141_1476633                                  4305  0 -     17153 C
e Eulemur_rubriventer.k141_774594                              252  0 +     13026 C
e Eulemur_mongoz.k141_232305                                 10761  0 +     97555 C
e Eulemur_macaco.k141_1562045                                12831  0 +     75513 C
e Eulemur_fulvus.k141_544389                                 14069  0 +     23973 C
e Eulemur_flavifrons.k141_1184614                            12834  0 +     26330 C
e Eulemur_coronatus.k141_885031                              15630  8 -     25546 I
e Eulemur_collaris.k141_377015                                6606  0 -     16928 C
e Eulemur_albifrons.k141_342033                              13892  0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Ellobius_talpinus.LOJH01081419.1                             538 13 +      8657 T
e Ellobius_lutescens.LOEQ01008920.1                          20407 13 -    110024 T
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Crocidura_indochinensis.CroInd_scaffold_37019               3028 88 -     19598 I
e Cricetulus_griseus.LT883664.1                           11667673 13 + 224834208 T
e Cheirogaleus_medius.k141_1055463                           16545  0 +     57038 C
e Cheirogaleus_major.k141_333249                             21180  0 -     52598 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              54422 10 +     85213 I
e Avahi_laniger.k141_765380                                  53795 15 -     92717 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     70906 13 +     87051 T

a score=0.000000
s hg38.chrUn_KI270753v1                                       6939 1 +     62944 a
s Allenopithecus_nigroviridis.k141_3361533                   14868 1 -     52922 a
i Allenopithecus_nigroviridis.k141_3361533               I 103 C 0
s Allochrocebus_lhoesti.k141_4309873                         14783 1 -     28001 a
i Allochrocebus_lhoesti.k141_4309873                     I 102 C 0
s Allochrocebus_preussi.k141_1442296                          5281 1 -     18505 a
i Allochrocebus_preussi.k141_1442296                     I 104 C 0
s Allochrocebus_solatus.k141_166128                           6133 1 -     12518 a
i Allochrocebus_solatus.k141_166128                      I 102 C 0
s Callibella_humilis.k141_1278103                             5572 1 -     10423 a
i Callibella_humilis.k141_1278103                        I 11 C 0
s Callimico_goeldii.k141_1091182                             25041 1 +     31915 a
i Callimico_goeldii.k141_1091182                         I 277 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590726 1 - 189096842 a
i Callithrix_jacchus.pat_scaffold_3                      I 11 C 0
s Callithrix_kuhlii.k119_1168854                               125 1 -     12329 A
i Callithrix_kuhlii.k119_1168854                         T 13 C 0
s Carlito_syrichta.NW_007247396.1                           201478 1 +    308752 a
i Carlito_syrichta.NW_007247396.1                        C 0 I 2
s Cebuella_niveiventris.k141_1251222                         10207 1 -     11392 a
i Cebuella_niveiventris.k141_1251222                     I 11 C 0
s Cebuella_pygmaea.k141_1309012                               6275 1 -      7577 a
i Cebuella_pygmaea.k141_1309012                          I 11 C 0
s Cebus_albifrons.Contig27                                25652944 1 +  26074798 a
i Cebus_albifrons.Contig27                               I 343 C 0
s Cebus_olivaceus.k141_1764483                                 882 1 +     28840 a
i Cebus_olivaceus.k141_1764483                           I 322 C 0
s Cebus_unicolor.k141_1837183                                  607 1 +     14051 a
i Cebus_unicolor.k141_1837183                            I 317 C 0
s Cephalopachus_bancanus.k141_1423433                         5483 1 +     31688 a
i Cephalopachus_bancanus.k141_1423433                    C 0 I 118
s Cercocebus_atys.KQ010504.1                               4475798 1 +   4669795 a
i Cercocebus_atys.KQ010504.1                             I 112 C 0
s Cercocebus_chrysogaster.k141_1540778                         302 1 +     17872 a
i Cercocebus_chrysogaster.k141_1540778                   I 14 C 0
s Cercocebus_lunulatus.k141_3342297                            959 1 -     14043 a
i Cercocebus_lunulatus.k141_3342297                      I 112 C 0
s Cercocebus_torquatus.k141_3057011                           8992 1 +     27781 A
i Cercocebus_torquatus.k141_3057011                      I 109 C 0
s Cercopithecus_ascanius.k141_1024104                         9156 1 -     20310 a
i Cercopithecus_ascanius.k141_1024104                    I 104 C 0
s Cercopithecus_cephus.k141_1078548                          12136 1 +     29689 A
i Cercopithecus_cephus.k141_1078548                      I 105 C 0
s Cercopithecus_diana.k141_1150327                            6889 1 -     20078 a
i Cercopithecus_diana.k141_1150327                       I 104 C 0
s Cercopithecus_hamlyni.k141_187466                          14806 1 -     27936 a
i Cercopithecus_hamlyni.k141_187466                      I 98 C 0
s Cercopithecus_lowei.k141_1854285                            3676 1 -     17152 a
i Cercopithecus_lowei.k141_1854285                       I 104 C 0
s Cercopithecus_albogularis.ctg5                                38817215 1 +  39242232 A
i Cercopithecus_albogularis.ctg5                               I 104 C 0
s Cercopithecus_mona.ctg39                                21222907 1 -  21565898 a
i Cercopithecus_mona.ctg39                               I 104 C 0
s Cercopithecus_neglectus.k141_2526306                       40025 1 -     53127 a
i Cercopithecus_neglectus.k141_2526306                   I 104 C 0
s Cercopithecus_nictitans.k141_1119862                         276 1 +     13442 A
i Cercopithecus_nictitans.k141_1119862                   I 104 C 0
s Cercopithecus_petaurista.k141_807961                       14825 1 -     27947 a
i Cercopithecus_petaurista.k141_807961                   I 104 C 0
s Cercopithecus_pogonias.k141_822820                         14801 1 +     17596 A
i Cercopithecus_pogonias.k141_822820                     I 104 C 0
s Cercopithecus_roloway.k141_2581234                           848 1 +     14005 A
i Cercopithecus_roloway.k141_2581234                     I 104 C 0
s Chlorocebus_aethiops.ctg25                              18428785 1 -  18827391 a
i Chlorocebus_aethiops.ctg25                             I 104 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15222 1 -     50209 a
i Chlorocebus_pygerythrus.k141_1025673                   I 104 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422222 1 + 135778131 a
i Chlorocebus_sabaeus.CM001947.1                         I 104 C 0
s Colobus_angolensis.KN981557.1                            1910734 1 +   2368649 a
i Colobus_angolensis.KN981557.1                          I 107 C 0
s Colobus_guereza.LG01                                   199948986 1 + 200372422 A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37268 1 +     84244 A
i Colobus_polykomos.k141_906115                          I 107 C 0
s Erythrocebus_patas.Contig38                             21205390 1 -  21539334 a
i Erythrocebus_patas.Contig38                            I 102 C 0
s Gorilla_beringei.k141_3596273                              16194 1 -     32273 a
i Gorilla_beringei.k141_3596273                          I 112 C 0
s Gorilla_gorilla.LT578341.1                             186338331 1 + 186649187 a
i Gorilla_gorilla.LT578341.1                             I 111 C 0
s Hoolock_leuconedys.ctg274                                    434993 1 +    630532 a
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7851 1 +     64341 a
i Leontocebus_fuscicollis.k141_1820339                   I 11 C 0
s Leontocebus_illigeri.k141_1304848                            191 1 -     35062 a
i Leontocebus_illigeri.k141_1304848                      I 24 C 0
s Leontocebus_nigricollis.k141_4610752                        7879 1 +     35603 a
i Leontocebus_nigricollis.k141_4610752                   I 262 C 0
s Leontopithecus_chrysomelas.k141_1519602                    29295 1 +     38576 a
i Leontopithecus_chrysomelas.k141_1519602                I 11 C 0
s Leontopithecus_rosalia.k141_464620                         25995 1 +     66356 a
i Leontopithecus_rosalia.k141_464620                     I 11 C 0
s Lophocebus_aterrimus.ctg367                              1437343 1 +   1826925 A
i Lophocebus_aterrimus.ctg367                            I 114 C 0
s Macaca_arctoides.k141_2326796                               7155 1 +     40492 A
i Macaca_arctoides.k141_2326796                          I 104 C 0
s Macaca_assamensis.Contig5                               59676414 1 +  60120075 A
i Macaca_assamensis.Contig5                              I 104 C 0
s Macaca_cyclopis.k119_18836                                 12930 1 -     26193 a
i Macaca_cyclopis.k119_18836                             I 107 C 0
s Macaca_fascicularis.k141_814140                            80714 1 -    114318 a
i Macaca_fascicularis.k141_814140                        I 107 C 0
s Macaca_fuscata.k119_255327                                  6401 1 -     23192 a
i Macaca_fuscata.k119_255327                             I 103 C 0
s Macaca_leonina.k141_3550399                                15874 1 -     29190 a
i Macaca_leonina.k141_3550399                            I 107 C 0
s Macaca_maura.k141_2733130                                  24439 1 +     37952 A
i Macaca_maura.k141_2733130                              I 107 C 0
s Macaca_mulatta.NC_041758.1                             186839528 1 + 187317192 a
i Macaca_mulatta.NC_041758.1                             I 107 C 0
s Macaca_nemestrina.KQ007038.1                            25458091 1 -  25927173 a
i Macaca_nemestrina.KQ007038.1                           I 107 C 0
s Macaca_nigra.k141_1655396                                  80287 1 +     89720 A
i Macaca_nigra.k141_1655396                              I 107 C 0
s Macaca_radiata.k141_3680011                                 7288 1 +     20474 A
i Macaca_radiata.k141_3680011                            I 107 C 0
s Macaca_siberu.k141_635500                                   7088 1 -     14993 a
i Macaca_siberu.k141_635500                              I 107 C 0
s Macaca_silenus.Contig273                                  329954 1 -    668171 a
i Macaca_silenus.Contig273                               I 107 C 0
s Macaca_thibetana.k99_256239                                 5401 1 -     24072 a
i Macaca_thibetana.k99_256239                            I 104 C 0
s Macaca_tonkeana.k141_1498238                               26026 1 -     45290 a
i Macaca_tonkeana.k141_1498238                           I 107 C 0
s Mandrillus_leucophaeus.scaffold280                      23937618 1 -  24302211 a
i Mandrillus_leucophaeus.scaffold280                     I 112 C 0
s Mandrillus_sphinx.Contig270                               351742 1 +    752769 A
i Mandrillus_sphinx.Contig270                            I 112 C 0
s Mico_argentatus.k141_1239457                                6086 1 -      7380 a
i Mico_argentatus.k141_1239457                           I 11 C 0
s Mico_humeralifer.k141_2457295                                315 1 +      1079 A
i Mico_humeralifer.k141_2457295                          I 11 C 0
s Mico_schneideri.k141_1950671                                      6098 1 -      7356 a
i Mico_schneideri.k141_1950671                                 I 11 C 0
s Miopithecus_ogouensis.k141_534055                           9322 1 -     28506 a
i Miopithecus_ogouensis.k141_534055                      I 103 C 0
s Nasalis_larvatus.k141_413338                               15325 1 +     21681 A
i Nasalis_larvatus.k141_413338                           I 111 C 0
s Pan_paniscus.KQ411613.1                                    44282 1 +     80009 a
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189143184 1 + 189151597 a
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                183443420 1 + 183742232 a
i Papio_anubis.CM001495.2                                I 112 C 0
s Papio_cynocephalus.k141_4307930                             7066 1 +     20448 A
i Papio_cynocephalus.k141_4307930                        I 112 C 0
s Papio_hamadryas.Contig39                                20563878 1 +  20919399 A
i Papio_hamadryas.Contig39                               I 112 C 0
s Papio_kindae.k141_1936966                                   5810 1 +     41871 A
i Papio_kindae.k141_1936966                              I 112 C 0
s Papio_papio.k141_802527                                     9103 1 +     27711 A
i Papio_papio.k141_802527                                I 112 C 0
s Papio_ursinus.k141_3428135                                  9172 1 +      9205 A
i Papio_ursinus.k141_3428135                             I 112 C 0
s Piliocolobus_badius.k141_1234363                           43816 1 +     62158 a
i Piliocolobus_badius.k141_1234363                       I 107 C 0
s Piliocolobus_gordonorum.k141_381342                        38563 1 +     89929 A
i Piliocolobus_gordonorum.k141_381342                    I 107 C 0
s Piliocolobus_kirkii.k141_448987                            39979 1 +     51399 A
i Piliocolobus_kirkii.k141_448987                        I 107 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296217 1 -  14605196 a
i Piliocolobus_tephrosceles.PDMG02000141.1               I 107 C 0
s Pongo_abelii.CM009266.2                                189131320 1 + 189387572 a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570927 1 +   9816681 a
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               73501 1 -     81375 a
i Presbytis_comata.k141_677006                           I 111 C 0
s Presbytis_mitrata.k141_1087752                              5321 1 +     19060 A
i Presbytis_mitrata.k141_1087752                         I 111 C 0
s Pygathrix_cinerea.k141_1153803                             15334 1 -     91421 a
i Pygathrix_cinerea.k141_1153803                         I 111 C 0
s Pygathrix_nigripes_b.ctg100                                 7609454 1 +   7812017 A
i Pygathrix_nigripes_b.ctg100                               I 111 C 0
s Pygathrix_nigripes_a.k141_215492                             15306 1 -     72585 a
i Pygathrix_nigripes_a.k141_215492                         I 111 C 0
s Rhinopithecus_bieti.k119_217274                             7017 1 -     11128 a
i Rhinopithecus_bieti.k119_217274                        I 109 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236366 1 - 195417433 a
i Rhinopithecus_roxellana.NC_044550.1                    I 105 C 0
s Rhinopithecus_strykeri.ctg102                            7672022 1 +   7961872 A
i Rhinopithecus_strykeri.ctg102                          I 109 C 0
s Saguinus_bicolor.k141_8081                                   467 1 +     42994 a
i Saguinus_bicolor.k141_8081                             I 11 C 0
s Saguinus_imperator.k141_57697                                252 1 +      1030 a
i Saguinus_imperator.k141_57697                          I 11 C 0
s Saguinus_inustus.k141_3945547                                331 1 -      8737 a
i Saguinus_inustus.k141_3945547                          I 28 C 0
s Saguinus_midas.LG03                                    209469818 1 + 209938924 a
i Saguinus_midas.LG03                                    I 11 C 0
s Saguinus_mystax.k141_374627                                 8453 1 -      9399 a
i Saguinus_mystax.k141_374627                            I 398 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951191 1 - 121099817 a
i Saimiri_boliviensis.NW_024100920.1                     I 7 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23530 1 +     46362 a
i Saimiri_cassiquiarensis.k141_2188234                   I 7 C 0
s Saimiri_macrodon.k141_716185                               23625 1 +     45824 a
i Saimiri_macrodon.k141_716185                           I 7 C 0
s Saimiri_oerstedii.k141_1487881                             40304 1 -     64574 a
i Saimiri_oerstedii.k141_1487881                         I 7 C 0
s Saimiri_sciureus.k141_2278166                               3376 1 -     23631 a
i Saimiri_sciureus.k141_2278166                          I 7 C 0
s Saimiri_ustus.k141_1484609                                 23521 1 -     61129 a
i Saimiri_ustus.k141_1484609                             I 7 C 0
s Sapajus_apella.ctg103                                    5420899 1 -   5703754 a
i Sapajus_apella.ctg103                                  I 112 C 0
s Sapajus_macrocephalus.k141_351809                          56140 1 -     80660 a
i Sapajus_macrocephalus.k141_351809                      I 11 C 0
s Semnopithecus_entellus.k141_1672505                          198 1 -     12572 A
i Semnopithecus_entellus.k141_1672505                    I 10 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27048 1 +     39453 A
i Semnopithecus_hypoleucos.k141_1615806                  I 110 C 0
s Semnopithecus_johnii.k141_670120                            7566 1 +     27826 A
i Semnopithecus_johnii.k141_670120                       I 109 C 0
s Semnopithecus_priam.k141_638794                             7088 1 -     19483 a
i Semnopithecus_priam.k141_638794                        I 110 C 0
s Semnopithecus_schistaceus.k141_1572284                       389 1 -     12762 A
i Semnopithecus_schistaceus.k141_1572284                 I 112 C 0
s Semnopithecus_vetulus.k141_910252                            250 1 +     13763 A
i Semnopithecus_vetulus.k141_910252                      I 117 C 0
s Tarsius_lariang.k141_2201908                               26594 1 +     70052 A
i Tarsius_lariang.k141_2201908                           C 0 T 109
s Tarsius_wallacei.k141_254427                                1391 1 -     16117 a
i Tarsius_wallacei.k141_254427                           C 0 T 109
s Theropithecus_gelada.CM009954.1                        186428738 1 + 186847797 a
i Theropithecus_gelada.CM009954.1                        I 112 C 0
s Trachypithecus_auratus.k141_722599                         11139 1 -     20410 a
i Trachypithecus_auratus.k141_722599                     I 111 C 0
s Trachypithecus_crepusculus.k141_582567                       253 1 -     12674 a
i Trachypithecus_crepusculus.k141_582567                 I 118 C 0
s Trachypithecus_cristatus.k141_580354                       11240 1 +     19930 A
i Trachypithecus_cristatus.k141_580354                   I 111 C 0
s Trachypithecus_francoisi.k141_1412647                       7651 1 -     19997 a
i Trachypithecus_francoisi.k141_1412647                  I 111 C 0
s Trachypithecus_geei.k141_277701                            47790 1 -     60166 a
i Trachypithecus_geei.k141_277701                        I 110 C 0
s Trachypithecus_germaini.k141_912491                        15262 1 -     27529 a
i Trachypithecus_germaini.k141_912491                    I 111 C 0
s Trachypithecus_hatinhensis.k141_143409                     15206 1 -     18194 a
i Trachypithecus_hatinhensis.k141_143409                 I 111 C 0
s Trachypithecus_laotum.k141_907409                           8918 1 -     21137 a
i Trachypithecus_laotum.k141_907409                      I 111 C 0
s Trachypithecus_leucocephalus.k141_587342                    7621 1 -     10723 a
i Trachypithecus_leucocephalus.k141_587342               I 111 C 0
s Trachypithecus_melamera.k141_434728                         6793 1 +      9834 A
i Trachypithecus_melamera.k141_434728                    I 111 C 0
s Trachypithecus_obscurus.k141_190785                        25106 1 +     32220 A
i Trachypithecus_obscurus.k141_190785                    I 111 C 0
s Trachypithecus_phayrei.ctg124                            5939208 1 +   6242583 A
i Trachypithecus_phayrei.ctg124                          I 111 C 0
s Trachypithecus_pileatus.k141_2007326                        8459 1 +     20839 A
i Trachypithecus_pileatus.k141_2007326                   I 110 C 0
e Echinops_telfairi.JH980293.1                            48780693 0 + 111700974 C
e Otolemur_garnettii.GL873799.1                             696403 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         4240 0 +      8798 C
e Galago_senegalensis.k141_631886                             4410 0 +     11339 C
e Galago_moholi.ctg2040                                     426720 0 -    453645 C
e Saguinus_labiatus.k141_285685                               8499 0 +      8564 C
e Chiropotes_albinasus.k141_2206961                            243 0 -     15524 C
e Callithrix_geoffroyi.k119_512088                            5259 0 +      5267 C
e Aotus_vociferans.k141_344750                               28684 0 -     47192 C
e Aotus_trivirgatus.k141_2152450                             15560 0 -     34685 C
e Aotus_nancymaae.KZ198451.1                               4298165 214 -   5030052 T
e Aotus_griseimembra.k141_2240599                            15558 0 -     34016 C
e Aotus_azarae.k141_3104676                                  15741 207 -     33861 T
e Alouatta_seniculus.k141_117119                             14962 21 +     50774 I
e Alouatta_puruensis.k141_362188                               301 0 +      5663 C
e Alouatta_palliata.k141_2135620                              3798 202 +     47717 T
e Alouatta_nigerrima.k141_3472759                            18209 0 -     18578 C
e Alouatta_macconnelli.k141_918386                             623 0 -      9457 C
e Alouatta_juara.k141_1509701                                24902 0 +     25266 C
e Alouatta_discolor.k141_566626                              11280 196 +     28687 T
e Alouatta_caraya.k141_1701091                                 629 0 -     36483 C
e Alouatta_belzebul.k141_3560514                              7515 0 +     51355 C
e Mus_pahari.LT608297.1                                   31355125 13 -  89631738 T
e Mus_spretus.CM004101.1                                  90752527 13 - 130317789 T
e Mus_musculus.chr8                                       87650466 13 - 129401213 T
e Mus_caroli.LT608237.1                                   84361468 13 - 120012414 T
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Loris_tardigradus.ctg83                                  1004789 0 +   6120653 C
e Loris_lydekkerianus.k141_2539221                            5969 0 +     11245 C
e Perodicticus_potto.k141_1092580                             8627 0 +     25941 C
e Perodicticus_ibeanus.k141_855320                           10221 0 +     13100 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      15002 0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5490 0 +     86975 C
e Xerus_inauris.XerIna_scaffold_2302                          1179 7 +    224448 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 10914 0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5372007 0 -   5488506 C
e Varecia_variegata.k141_1128296                             11582 0 +     24756 C
e Varecia_rubra.k141_590885                                  11523 0 +     50397 C
e Ursus_maritimus.KK499267.1                               4850561 0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   53428 0 -     77625 C
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     9355 0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2155702 0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4293360 0 +  10818551 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     81319 0 +    610378 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   6528 0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              105558 0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    387346 0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      118889 0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 72744 0 +    116680 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                10927 0 +     41958 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6810891 0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629              18449 0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             30859 0 +     97271 C
e Spermophilus_dauricus.KZ294078.1                         1954051 7 -   3870691 I
e Sorex_araneus.JH798187.1                                13651056 93 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               3880 0 +   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_60841                    11982 13 -     12148 T
e Scalopus_aquaticus.ScaAqu_scaffold_662                    153331 0 -    313613 C
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                87928 0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53570728 13 +  90668790 T
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20274433 0 -  38429054 C
e Pteropus_vampyrus.KN534172.1                                6959 0 -      8028 C
e Pteropus_alecto.KB030862.1                              22976906 0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         40361 0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            15200 0 -     21811 C
e Psammomys_obesus.NESX01036370.1                            10498 13 -     21651 T
e Propithecus_verreauxi.k141_956661                           4907 5 -      6182 I
e Propithecus_tattersalli.k141_790011                        28684 5 -     67325 I
e Propithecus_perrieri.k141_1200571                           4859 5 -     24134 I
e Propithecus_edwardsi.k141_1176054                          26672 5 +     35766 I
e Propithecus_diadema.k141_58108                              1194 5 -     13098 I
e Propithecus_coronatus.k141_347390                          29151 5 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     990839 5 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2596858 0 -   4620579 C
e Procavia_capensis.ProCapCap_scaffold_85530                 13461 0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             1885 0 +     22620 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     28237 0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18194880 13 -  18517816 T
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12776 0 -     78924 C
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4721367 0 -   8748460 C
e Panthera_pardus.KV860321.1                                264488 0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  151279 0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       462466 0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                        67147453 0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387               9959 0 -     18566 C
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80254 13 +    102263 T
e Ondatra_zibethicus.OndZib_scaffold_46174                   25254 13 +     28053 T
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              506767 7 -   2017862 I
e Octodon_degus.JH651603.1                                  746968 0 +  11899542 C
e Ochotona_princeps.JH802162.1                             1363659 0 +   3988456 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761687 0 + 199412804 C
e Nycticebus_coucang.k141_1127096                              257 0 +      2075 C
e Nycticebus_bengalensis.LG01                            102586333 0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9149518 0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20307627 0 +  31847680 C
e Nannospalax_galili.KL204047.1                            2034176 0 -   3037898 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189383 0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_281845                          91 0 +      1835 C
e Myotis_lucifugus.GL429869.1                              3903942 0 -   4330536 C
e Myotis_davidii.KB100139.1                                1587853 0 -   6019432 C
e Myotis_brandtii.KE162005.1                                280588 0 -  10118263 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     71358 0 -     80779 C
e Mustela_putorius.JH418006.1                               301584 0 -  14710649 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              5056 0 +     14296 C
e Murina_feae.MurFea_scaffold_85699                           6945 0 +     14753 C
e Mungos_mungo.MunMun_flattened_line_23663                   35546 0 +     37127 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 141745 0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Mirza_zaza.k141_952172                                      9148 0 -     37649 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         6041 0 -      8324 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             34407 9 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1850726 9 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11260586 13 -  27267610 T
e Micronycteris_hirsuta.MicHir_scaffold_52381                15773 0 -     19307 C
e Microgale_talazaci.MicTal_scaffold_6613                    22442 0 -    145209 C
e Microcebus_murinus.CM007674.1                           18291603 0 -  93316391 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182348 13 -  29670104 T
e Meriones_unguiculatus.MerUng_scaffold_7390                 32854 13 +    140813 T
e Mellivora_capensis.MelCap_flattened_line_69365             10171 0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                        10455 0 -    207569 C
e Marmota_marmota.CZRN01000018.1                          33103196 7 -  40650429 I
e Manis_pentadactyla.KN006162.1                              50609 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18616 0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 90740 0 +     94391 C
e Lycaon_pictus.CM007581.1                                17955450 0 -  59628241 C
e Loxodonta_africana.GL010049.1                            4217439 0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     6594 0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3043173 0 +   3914936 C
e Lepilemur_septentrionalis.k141_185316                      27069 0 +     54090 C
e Lepilemur_ruficaudatus.k141_121139                          1671 0 +     25010 C
e Lepilemur_dorsalis.k141_577674                             29133 0 +     45836 C
e Lepilemur_ankaranensis.k141_596936                         11072 0 -     23766 C
e Lemur_catta.scaffold_24                                 15524178 0 -  30322482 C
e Lasiurus_borealis.LasBor_scaffold_32767                    16494 0 -     42476 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276906 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Indri_indri.k141_3655594                                   22621 5 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7520996 7 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      83225 0 +    135385 C
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  45140 0 +     55795 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                1006 0 +      7595 C
e Heterocephalus_glaber.JH602082.1                        20662336 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               242446 0 +    327341 C
e Hapalemur_occidentalis.k141_907772                         13663 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                         13826 0 -     41752 C
e Hapalemur_griseus.k141_1511508                             13725 0 +     18253 C
e Hapalemur_gilberti.k141_488810                             12086 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           6937 0 -     19426 C
e Graphiurus_murinus.GraMur_scaffold_10447                   32714 0 +     78134 C
e Glis_glis.GliGli_scaffold_19807                            31472 0 +     49224 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Galeopterus_variegatus.GalVar_scaffold_108840               1305 0 -      9135 C
e Galagoides_demidoff.k141_1711393                            1708 0 +     41679 C
e Fukomys_damarensis.KN121974.1                             850547 0 +   3816255 C
e Felis_nigripes.FelNig_flattened_line_20823                  9664 0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20195920 0 + 205367284 C
e Eulemur_sanfordi.k141_1122526                              13878 0 +    111500 C
e Eulemur_rufus.k141_1476633                                  4305 0 -     17153 C
e Eulemur_rubriventer.k141_774594                              252 0 +     13026 C
e Eulemur_mongoz.k141_232305                                 10761 0 +     97555 C
e Eulemur_macaco.k141_1562045                                12831 0 +     75513 C
e Eulemur_fulvus.k141_544389                                 14069 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                            12834 0 +     26330 C
e Eulemur_coronatus.k141_885031                              15630 8 -     25546 I
e Eulemur_collaris.k141_377015                                6606 0 -     16928 C
e Eulemur_albifrons.k141_342033                              13892 0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3328354 0 -   7059049 C
e Equus_przewalskii.KK951119.1                               33525 0 +    498745 C
e Equus_caballus.CM000403.2                               18531496 0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1283676 0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2145849 0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16329434 0 -  41312741 C
e Ellobius_talpinus.LOJH01081419.1                             538 13 +      8657 T
e Ellobius_lutescens.LOEQ01008920.1                          20407 13 -    110024 T
e Elephantulus_edwardii.JH947257.1                         1097781 0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Eidolon_helvum.KE759718.1                                  10647 0 +     11740 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    36513 0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    6174 0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  673422 0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8630246 0 +  20541912 C
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Daubentonia_madagascariensis.ctg71                      12537404 0 -  12879189 C
e Dasypus_novemcinctus.JH564415.1                            63659 0 +   2246927 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  35879 0 +     51376 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    837191 0 +   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129             28613 0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_37019               3028 88 -     19598 I
e Cricetulus_griseus.LT883664.1                           11667673 13 + 224834208 T
e Cricetomys_gambianus.CriGam_scaffold_18520                 50301 8 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          14530 0 -     20389 C
e Condylura_cristata.JH655891.1                           17548212 0 -  53390261 C
e Choloepus_hoffmanni.KN194906.1                            173509 0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 18432 0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1252919 0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           16545 0 +     57038 C
e Cheirogaleus_major.k141_333249                             21180 0 -     52598 C
e Chaetophractus_vellerosus.ChaVel_scaffold_138870             652 0 -      8501 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2598 0 -     25243 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     93143 43 +    217609 I
e Castor_canadensis.CasCan_scaffold_2074                    137189 2 +    179628 I
e Carollia_perspicillata.CarPer_scaffold_92756                5229 0 -     11696 C
e Capromys_pilorides.CapPil_scaffold_65020                    1171 0 -     12242 C
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18500511 0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17959210 0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9034734 0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_27089                       39 0 -     43241 C
e CanFam4.chr16                                           17799291 0 -  60362399 C
e Camelus_ferus.KB017975.1                                  403249 0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2334965 0 -   7040546 C
e Camelus_bactrianus.KN276810.1                           10002507 0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              54422 10 +     85213 I
e Avahi_laniger.k141_765380                                  53795 15 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  4880 0 +     43469 C
e Arctocebus_calabarensis.k141_2318572                       11577 0 +     14667 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      12722 0 +     20879 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      185472 0 +    412891 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74605 0 -     89534 C
e Ailurus_fulgens.LNAC01001112.1                             79476 0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9510700 0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     70906 13 +     87051 T
e Acinonyx_jubatus.LLWD01001279.1                           827426 0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6940 1 +     62944 a
s Acinonyx_jubatus.LLWD01001279.1                           827426 1 -   1699592 a
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 1
s Acomys_cahirinus.AcoCah_scaffold_12655                     70893 1 +     87051 A
i Acomys_cahirinus.AcoCah_scaffold_12655                 T 13 I 1
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510700 1 -  29979442 a
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 1
s Ailurus_fulgens.LNAC01001112.1                             79476 1 -    347723 a
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 1
s Allactaga_bullata.AllBul_scaffold_9566                     74605 1 -     89534 A
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 1
s Allenopithecus_nigroviridis.k141_3361533                   14869 1 -     52922 a
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         14784 1 -     28001 a
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          5282 1 -     18505 a
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           6134 1 -     12518 a
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185472 1 +    412891 A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 1
s Aplodontia_rufa.AprRuf_scaffold_68852                      12722 1 +     20879 A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 1
s Arctocebus_calabarensis.k141_2318572                       11577 1 +     14667 A
i Arctocebus_calabarensis.k141_2318572                   C 0 I 1
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4880 1 +     43469 A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 1
s Callibella_humilis.k141_1278103                             5573 1 -     10423 a
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             25042 1 +     31915 A
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590727 1 - 189096842 a
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                               126 1 -     12329 A
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002507 1 -  17673402 a
i Camelus_bactrianus.KN276810.1                          C 0 I 7
s Camelus_dromedarius.KN272107.1                           2334965 1 -   7040546 a
i Camelus_dromedarius.KN272107.1                         C 0 I 7
s Camelus_ferus.KB017975.1                                  403249 1 -   1652518 a
i Camelus_ferus.KB017975.1                               C 0 I 7
s CanFam4.chr16                                           17799291 1 -  60362399 A
i CanFam4.chr16                                          C 0 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_27089                       39 1 -     43241 A
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 I 1
s Canis_lupus_dingo.QKWQ01000480.1                         9034734 1 -   9314153 a
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 1
s Canis_lupus_familiaris.chr16                            17959210 1 -  59632846 a
i Canis_lupus_familiaris.chr16                           C 0 I 1
s Canis_lupus_orion.HG994398.1                            18500511 1 +  63665305 a
i Canis_lupus_orion.HG994398.1                           C 0 I 1
s Capromys_pilorides.CapPil_scaffold_65020                    1171 1 -     12242 G
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 1
s Carlito_syrichta.NW_007259797.1                           156104 1 -    496798 a
i Carlito_syrichta.NW_007259797.1                        I 9 I 1
s Carollia_perspicillata.CarPer_scaffold_92756                5229 1 -     11696 A
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 1
s Castor_canadensis.CasCan_scaffold_2074                    137191 1 +    179628 A
i Castor_canadensis.CasCan_scaffold_2074                 I 2 I 1
s Cebuella_niveiventris.k141_1251222                         10208 1 -     11392 a
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               6276 1 -      7577 a
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25652945 1 +  26074798 a
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                 883 1 +     28840 a
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                  608 1 +     14051 a
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         5602 1 +     31688 a
i Cephalopachus_bancanus.k141_1423433                    I 118 I 1
s Ceratotherium_simum.JH767749.1                          12231571 1 +  27778364 a
i Ceratotherium_simum.JH767749.1                         C 0 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2598 1 -     25243 A
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 I 1
s Cercocebus_atys.KQ010504.1                               4475799 1 +   4669795 a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                         303 1 +     17872 a
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                            960 1 -     14043 a
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           8993 1 +     27781 A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         9157 1 -     20310 a
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          12137 1 +     29689 A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            6890 1 -     20078 a
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          14807 1 -     27936 a
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            3677 1 -     17152 a
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38817216 1 +  39242232 A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222908 1 -  21565898 a
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40026 1 -     53127 a
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                         277 1 +     13442 A
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14826 1 -     27947 a
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         14802 1 +     17596 A
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                           849 1 +     14005 A
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             652 1 -      8501 A
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 I 1
s Chinchilla_lanigera.JH722012.1                           1252919 1 +   2543920 a
i Chinchilla_lanigera.JH722012.1                         C 0 I 1
s Chlorocebus_aethiops.ctg25                              18428786 1 -  18827391 a
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15223 1 -     50209 a
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422223 1 + 135778131 a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 18432 1 +     19366 A
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 I 1
s Choloepus_hoffmanni.KN194906.1                            173509 1 +    839153 a
i Choloepus_hoffmanni.KN194906.1                         C 0 I 1
s Colobus_angolensis.KN981557.1                            1910735 1 +   2368649 a
i Colobus_angolensis.KN981557.1                          C 0 T 109
s Colobus_guereza.LG01                                   199948987 1 + 200372422 A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37269 1 +     84244 A
i Colobus_polykomos.k141_906115                          C 0 T 109
s Condylura_cristata.JH655891.1                           17548212 1 -  53390261 a
i Condylura_cristata.JH655891.1                          C 0 I 1
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14530 1 -     20389 A
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 1
s Cricetulus_griseus.LT883664.1                           11667660 1 + 224834208 A
i Cricetulus_griseus.LT883664.1                          T 13 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28613 1 -     87169 A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 1
s Ctenodactylus_gundi.CteGun_scaffold_65                    837191 1 +   1526836 A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 1
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35879 1 +     51376 G
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 1
s Dasypus_novemcinctus.JH564415.1                            63659 1 +   2246927 a
i Dasypus_novemcinctus.JH564415.1                        C 0 I 1
s Daubentonia_madagascariensis.ctg71                      12537404 1 -  12879189 A
i Daubentonia_madagascariensis.ctg71                     C 0 I 1
s Desmodus_rotundus.KZ672289.1                             8630246 1 +  20541912 a
i Desmodus_rotundus.KZ672289.1                           C 0 I 1
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673422 1 +   1390856 a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 1
s Diceros_bicornis.DicBicMic_scaffold_5955                    6174 1 +    198055 A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 1
s Dinomys_branickii.DinBra_scaffold_21862                    36513 1 +     67921 A
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 1
s Echinops_telfairi.JH980293.1                            48780693 1 + 111700974 a
i Echinops_telfairi.JH980293.1                           C 0 I 1
s Eidolon_helvum.KE759718.1                                  10647 1 +     11740 a
i Eidolon_helvum.KE759718.1                              C 0 I 1
s Elephantulus_edwardii.JH947257.1                         1097781 1 +  10337057 a
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          20394 1 -    110024 G
i Ellobius_lutescens.LOEQ01008920.1                      T 13 I 1
s Ellobius_talpinus.LOJH01081419.1                             525 1 +      8657 A
i Ellobius_talpinus.LOJH01081419.1                       T 13 I 1
s Enhydra_lutris.KZ291758.1                               16329434 1 -  41312741 a
i Enhydra_lutris.KZ291758.1                              C 0 I 1
s Eptesicus_fuscus.JH977646.1                              2145849 1 -  14770903 a
i Eptesicus_fuscus.JH977646.1                            C 0 I 1
s Equus_asinus.JREZ01000139.1                              1283676 1 +   4378816 a
i Equus_asinus.JREZ01000139.1                            C 0 I 1
s Equus_caballus.CM000403.2                               18531496 1 -  39960074 a
i Equus_caballus.CM000403.2                              C 0 I 1
s Equus_przewalskii.KK951119.1                               33525 1 +    498745 a
i Equus_przewalskii.KK951119.1                           C 0 I 1
s Erinaceus_europaeus.JH835339.1                           3328354 1 -   7059049 g
i Erinaceus_europaeus.JH835339.1                         C 0 I 1
s Erythrocebus_patas.Contig38                             21205391 1 -  21539334 a
i Erythrocebus_patas.Contig38                            C 0 C 0
s Felis_catus.CM001381.2                                  20237077 1 + 206538554 a
i Felis_catus.CM001381.2                                 C 0 I 1
s Felis_catus_fca126.CM031415.1                           20195920 1 + 205367284 a
i Felis_catus_fca126.CM031415.1                          C 0 I 1
s Felis_nigripes.FelNig_flattened_line_20823                  9664 1 -     36744 A
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 1
s Fukomys_damarensis.KN121974.1                             850547 1 +   3816255 a
i Fukomys_damarensis.KN121974.1                          C 0 I 1
s Galago_moholi.ctg2040                                     426720 1 -    453645 A
i Galago_moholi.ctg2040                                  C 0 I 1
s Galago_senegalensis.k141_631886                             4410 1 +     11339 a
i Galago_senegalensis.k141_631886                        C 0 I 1
s Galagoides_demidoff.k141_1711393                            1708 1 +     41679 A
i Galagoides_demidoff.k141_1711393                       C 0 I 1
s Galeopterus_variegatus.GalVar_scaffold_108840               1305 1 -      9135 a
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 I 1
s Glis_glis.GliGli_scaffold_19807                            31472 1 +     49224 A
i Glis_glis.GliGli_scaffold_19807                        C 0 I 1
s Gorilla_beringei.k141_3596273                              16195 1 -     32273 a
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186338332 1 + 186649187 a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   32714 1 +     78134 A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 1
s Helogale_parvula.HelPar_flattened_line_2585               242446 1 +    327341 A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 1
s Heterocephalus_glaber.JH602082.1                        20662336 1 +  22651954 A
i Heterocephalus_glaber.JH602082.1                       C 0 I 1
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1006 1 +      7595 A
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 I 1
s Hoolock_leuconedys.ctg274                                    434994 1 +    630532 a
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45140 1 +     55795 A
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 1
s Hystrix_cristata.HysCri_scaffold_5660                      83225 1 +    135385 A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 1
s Jaculus_jaculus.JH725527.1                               8276906 1 -   9596543 A
i Jaculus_jaculus.JH725527.1                             C 0 I 1
s Lasiurus_borealis.LasBor_scaffold_32767                    16494 1 -     42476 A
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 1
s Leontocebus_fuscicollis.k141_1820339                        7852 1 +     64341 a
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                            192 1 -     35062 a
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        7880 1 +     35603 a
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    29296 1 +     38576 a
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         25996 1 +     66356 a
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3043173 1 +   3914936 a
i Leptonychotes_weddellii.KB714746.1                     C 0 I 1
s Lepus_americanus.LepAme_scaffold_107385                     6594 1 -     14121 a
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 2
s Lophocebus_aterrimus.ctg367                              1437344 1 +   1826925 A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5969 1 +     11245 A
i Loris_lydekkerianus.k141_2539221                       C 0 I 1
s Loris_tardigradus.ctg83                                  1004789 1 +   6120653 A
i Loris_tardigradus.ctg83                                C 0 I 1
s Loxodonta_africana.GL010049.1                            4217439 1 -  43346337 a
i Loxodonta_africana.GL010049.1                          C 0 I 1
s Lycaon_pictus.CM007581.1                                17955450 1 -  59628241 N
i Lycaon_pictus.CM007581.1                               C 0 I 1
s Macaca_arctoides.k141_2326796                               7156 1 +     40492 A
i Macaca_arctoides.k141_2326796                          C 0 T 106
s Macaca_assamensis.Contig5                               59676415 1 +  60120075 A
i Macaca_assamensis.Contig5                              C 0 T 106
s Macaca_cyclopis.k119_18836                                 12931 1 -     26193 a
i Macaca_cyclopis.k119_18836                             C 0 T 109
s Macaca_fascicularis.k141_814140                            80715 1 -    114318 a
i Macaca_fascicularis.k141_814140                        C 0 T 109
s Macaca_fuscata.k119_255327                                  6402 1 -     23192 a
i Macaca_fuscata.k119_255327                             C 0 T 105
s Macaca_leonina.k141_3550399                                15875 1 -     29190 a
i Macaca_leonina.k141_3550399                            C 0 T 109
s Macaca_maura.k141_2733130                                  24440 1 +     37952 A
i Macaca_maura.k141_2733130                              C 0 T 109
s Macaca_mulatta.NC_041758.1                             186839529 1 + 187317192 a
i Macaca_mulatta.NC_041758.1                             C 0 T 109
s Macaca_nemestrina.KQ007038.1                            25458092 1 -  25927173 a
i Macaca_nemestrina.KQ007038.1                           C 0 T 109
s Macaca_nigra.k141_1655396                                  80288 1 +     89720 A
i Macaca_nigra.k141_1655396                              C 0 T 109
s Macaca_radiata.k141_3680011                                 7289 1 +     20474 A
i Macaca_radiata.k141_3680011                            C 0 T 109
s Macaca_siberu.k141_635500                                   7089 1 -     14993 a
i Macaca_siberu.k141_635500                              C 0 T 109
s Macaca_silenus.Contig273                                  329955 1 -    668171 a
i Macaca_silenus.Contig273                               C 0 T 109
s Macaca_thibetana.k99_256239                                 5402 1 -     24072 a
i Macaca_thibetana.k99_256239                            C 0 T 106
s Macaca_tonkeana.k141_1498238                               26027 1 -     45290 a
i Macaca_tonkeana.k141_1498238                           C 0 T 109
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90740 1 +     94391 A
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 1
s Mandrillus_leucophaeus.scaffold280                      23937619 1 -  24302211 a
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               351743 1 +    752769 A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              18616 1 +    737560 a
i Manis_javanica.JSZB01003497.1                          C 0 I 1
s Manis_pentadactyla.KN006162.1                              50609 1 -    317179 a
i Manis_pentadactyla.KN006162.1                          C 0 I 1
s Megaderma_lyra.MegLyr_scaffold_4542                        10455 1 -    207569 A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 1
s Mellivora_capensis.MelCap_flattened_line_69365             10171 1 +     13704 A
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 1
s Meriones_unguiculatus.MerUng_scaffold_7390                 32841 1 +    140813 A
i Meriones_unguiculatus.MerUng_scaffold_7390             T 13 I 1
s Mesocricetus_auratus.KB708134.1                         12182335 1 -  29670104 A
i Mesocricetus_auratus.KB708134.1                        T 13 I 1
s Mico_argentatus.k141_1239457                                6087 1 -      7380 a
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_2457295                                316 1 +      1079 A
i Mico_humeralifer.k141_2457295                          C 0 C 0
s Mico_schneideri.k141_1950671                                      6099 1 -      7356 a
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    22442 1 -    145209 A
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 1
s Micronycteris_hirsuta.MicHir_scaffold_52381                15773 1 -     19307 A
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 1
s Microtus_ochrogaster.CM001695.1                         11260573 1 -  27267610 A
i Microtus_ochrogaster.CM001695.1                        T 13 I 1
s Miniopterus_natalensis.LDJU01000034.1                    1850735 1 +   8254450 a
i Miniopterus_natalensis.LDJU01000034.1                  I 9 I 1
s Miniopterus_schreibersii.MinSch_scaffold_18080             34416 1 +     64694 A
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 9 I 1
s Miopithecus_ogouensis.k141_534055                           9323 1 -     28506 a
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6041 1 -      8324 A
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 1
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141745 1 -    366855 A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 1
s Mungos_mungo.MunMun_flattened_line_23663                   35546 1 +     37127 A
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 1
s Murina_feae.MurFea_scaffold_85699                           6945 1 +     14753 A
i Murina_feae.MurFea_scaffold_85699                      C 0 I 1
s Mus_caroli.LT608237.1                                   84361455 1 - 120012414 A
i Mus_caroli.LT608237.1                                  T 13 I 1
s Mus_musculus.chr8                                       87650453 1 - 129401213 a
i Mus_musculus.chr8                                      T 13 I 1
s Mus_pahari.LT608297.1                                   31355112 1 -  89631738 A
i Mus_pahari.LT608297.1                                  T 13 I 1
s Mus_spretus.CM004101.1                                  90752514 1 - 130317789 a
i Mus_spretus.CM004101.1                                 T 13 I 1
s Mustela_putorius.JH418006.1                               301584 1 -  14710649 a
i Mustela_putorius.JH418006.1                            C 0 I 1
s Myocastor_coypus.MyoCoy_scaffold_10123                     71358 1 -     80779 G
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 I 1
s Myotis_brandtii.KE162005.1                                280588 1 -  10118263 a
i Myotis_brandtii.KE162005.1                             C 0 I 1
s Myotis_davidii.KB100139.1                                1587853 1 -   6019432 c
i Myotis_davidii.KB100139.1                              C 0 I 1
s Myotis_lucifugus.GL429869.1                              3903942 1 -   4330536 a
i Myotis_lucifugus.GL429869.1                            C 0 I 1
s Myotis_myotis.MyoMyo_scaffold_281845                          91 1 +      1835 A
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 I 1
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189383 1 +    196477 A
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 I 1
s Nannospalax_galili.KL204047.1                            2034176 1 -   3037898 A
i Nannospalax_galili.KL204047.1                          C 0 I 1
s Nasalis_larvatus.k141_413338                               15326 1 +     21681 A
i Nasalis_larvatus.k141_413338                           C 0 T 113
s Neomonachus_schauinslandi.NINY01007730.1                20307627 1 +  31847680 a
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 1
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149518 1 -   9404916 a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 1
s Nycticebus_bengalensis.LG01                            102586333 1 - 196305487 A
i Nycticebus_bengalensis.LG01                            C 0 I 1
s Nycticebus_coucang.k141_1127096                              257 1 +      2075 a
i Nycticebus_coucang.k141_1127096                        C 0 I 1
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761687 1 + 199412804 A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 1
s Ochotona_princeps.JH802162.1                             1363659 1 +   3988456 a
i Ochotona_princeps.JH802162.1                           C 0 I 1
s Octodon_degus.JH651603.1                                  746968 1 +  11899542 G
i Octodon_degus.JH651603.1                               C 0 I 1
s Ondatra_zibethicus.OndZib_scaffold_46174                   25241 1 +     28053 A
i Ondatra_zibethicus.OndZib_scaffold_46174               T 13 I 1
s Onychomys_torridus.OnyTor_scaffold_2986                    80241 1 +    102263 A
i Onychomys_torridus.OnyTor_scaffold_2986                T 13 I 1
s Orycteropus_afer.OryAfe_flattened_line_144387               9959 1 -     18566 A
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 I 1
s Oryctolagus_cuniculus.CM000791.1                        67147453 1 + 174332312 a
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 3
s Otocyon_megalotis.JAEUCK010005147.1                       462466 1 -    559221 a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 1
s Otolemur_crassicaudatus.k141_222918                         4240 1 +      8798 A
i Otolemur_crassicaudatus.k141_222918                    C 0 I 1
s Otolemur_garnettii.GL873799.1                             696403 1 -   1103335 a
i Otolemur_garnettii.GL873799.1                          C 0 I 1
s Pan_paniscus.KQ411613.1                                    44283 1 +     80009 a
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189143185 1 + 189151597 a
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  151279 1 +    230217 A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 1
s Panthera_pardus.KV860321.1                                264488 1 +  18783137 a
i Panthera_pardus.KV860321.1                             C 0 I 1
s Panthera_tigris.KE722367.1                               4721367 1 -   8748460 a
i Panthera_tigris.KE722367.1                             C 0 I 1
s Papio_anubis.CM001495.2                                183443421 1 + 183742232 a
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7067 1 +     20448 A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563879 1 +  20919399 A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   5811 1 +     41871 A
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     9104 1 +     27711 A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_3428135                                  9173 1 +      9205 A
i Papio_ursinus.k141_3428135                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12776 1 -     78924 A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 1
s Perodicticus_ibeanus.k141_855320                           10221 1 +     13100 A
i Perodicticus_ibeanus.k141_855320                       C 0 I 1
s Perodicticus_potto.k141_1092580                             8627 1 +     25941 A
i Perodicticus_potto.k141_1092580                        C 0 I 1
s Peromyscus_maniculatus.KI615324.1                       18194867 1 -  18517816 G
i Peromyscus_maniculatus.KI615324.1                      T 13 I 1
s Petromus_typicus.PetTyp_scaffold_42190                     28237 1 -     29689 G
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 I 1
s Piliocolobus_badius.k141_1234363                           43817 1 +     62158 a
i Piliocolobus_badius.k141_1234363                       C 0 T 109
s Piliocolobus_gordonorum.k141_381342                        38564 1 +     89929 A
i Piliocolobus_gordonorum.k141_381342                    C 0 T 109
s Piliocolobus_kirkii.k141_448987                            39980 1 +     51399 A
i Piliocolobus_kirkii.k141_448987                        C 0 T 109
s Piliocolobus_tephrosceles.PDMG02000141.1                14296218 1 -  14605196 a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 T 109
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1885 1 +     22620 A
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 1
s Pongo_abelii.CM009266.2                                189131321 1 + 189387572 a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570928 1 +   9816681 A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               73502 1 -     81375 a
i Presbytis_comata.k141_677006                           C 0 T 113
s Presbytis_mitrata.k141_1087752                              5322 1 +     19060 A
i Presbytis_mitrata.k141_1087752                         C 0 T 113
s Procavia_capensis.ProCapCap_scaffold_85530                 13461 1 -     22811 A
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 I 1
s Psammomys_obesus.NESX01036370.1                            10485 1 -     21651 A
i Psammomys_obesus.NESX01036370.1                        T 13 I 1
s Pteronotus_parnellii.KE909381.1                            15200 1 -     21811 a
i Pteronotus_parnellii.KE909381.1                        C 0 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40361 1 +     42204 A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 1
s Pteropus_alecto.KB030862.1                              22976906 1 +  28871421 a
i Pteropus_alecto.KB030862.1                             C 0 I 1
s Pteropus_vampyrus.KN534172.1                                6959 1 -      8028 a
i Pteropus_vampyrus.KN534172.1                           C 0 I 1
s Puma_concolor.QAVW01001104.1                            20274433 1 -  38429054 a
i Puma_concolor.QAVW01001104.1                           C 0 I 1
s Pygathrix_cinerea.k141_1153803                             15335 1 -     91421 a
i Pygathrix_cinerea.k141_1153803                         C 0 T 113
s Pygathrix_nigripes_b.ctg100                                 7609455 1 +   7812017 A
i Pygathrix_nigripes_b.ctg100                               C 0 T 113
s Pygathrix_nigripes_a.k141_215492                             15307 1 -     72585 a
i Pygathrix_nigripes_a.k141_215492                         C 0 T 113
s Rattus_norvegicus.chr16                                 53570715 1 +  90668790 A
i Rattus_norvegicus.chr16                                T 13 I 1
s Rhinopithecus_bieti.k119_217274                             7018 1 -     11128 a
i Rhinopithecus_bieti.k119_217274                        C 0 T 111
s Rhinopithecus_roxellana.NC_044550.1                     91236367 1 - 195417433 a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672023 1 +   7961872 A
i Rhinopithecus_strykeri.ctg102                          C 0 T 111
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87928 1 -     96226 A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 1
s Saguinus_bicolor.k141_8081                                   468 1 +     42994 a
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_57697                                253 1 +      1030 a
i Saguinus_imperator.k141_57697                          C 0 C 0
s Saguinus_inustus.k141_3945547                                332 1 -      8737 a
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_midas.LG03                                    209469819 1 + 209938924 a
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 8454 1 -      9399 a
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951192 1 - 121099817 a
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23531 1 +     46362 a
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               23626 1 +     45824 a
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             40305 1 -     64574 a
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               3377 1 -     23631 a
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 23522 1 -     61129 a
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420900 1 -   5703754 a
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          56141 1 -     80660 a
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153331 1 -    313613 A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 1
s Semnopithecus_entellus.k141_1672505                          199 1 -     12572 A
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27049 1 +     39453 A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            7567 1 +     27826 A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             7089 1 -     19483 a
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                       390 1 -     12762 A
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                            251 1 +     13763 A
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_60841                    11969 1 -     12148 a
i Sigmodon_hispidus.SigHis_scaffold_60841                T 13 I 7
s Solenodon_paradoxus.SolPar_flattened_line_126               3880 1 +   1910179 A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 1
s Spilogale_gracilis.SpiGra_flattened_line_13525             30859 1 +     97271 A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 1
s Suricata_suricatta.SurSur_flattened_line_6629              18449 1 -    196729 A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 1
s Sus_scrofa.CM000828.4                                    6810891 1 +  69701581 a
i Sus_scrofa.CM000828.4                                  C 0 I 42
s Tadarida_brasiliensis.TadBra_scaffold_25820                10927 1 +     41958 A
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 1
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72744 1 +    116680 A
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 I 1
s Tapirus_indicus.TapInd_scaffold_9301                      118889 1 -    156842 A
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 1
s Tapirus_terrestris.TapTer_scaffold_755                    387346 1 +    539355 A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 1
s Tarsius_lariang.k141_2201908                               26486 1 +     70052 a
i Tarsius_lariang.k141_2201908                           T 109 I 1
s Tarsius_wallacei.k141_254427                                1283 1 -     16117 a
i Tarsius_wallacei.k141_254427                           T 109 I 1
s Theropithecus_gelada.CM009954.1                        186428739 1 + 186847797 a
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105558 1 +    114563 A
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 1
s Tolypeutes_matacus.TolMat_scaffold_228639                   6528 1 +      8208 A
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 I 1
s Tonatia_saurophila.TonSau_scaffold_294                     81319 1 +    610378 A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 1
s Trachypithecus_auratus.k141_722599                         11140 1 -     20410 a
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                       254 1 -     12674 a
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       11241 1 +     19930 A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       7652 1 -     19997 a
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            47791 1 -     60166 a
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        15263 1 -     27529 a
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     15207 1 -     18194 a
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           8919 1 -     21137 a
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    7622 1 -     10723 a
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         6794 1 +      9834 A
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        25107 1 +     32220 A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5939209 1 +   6242583 A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        8460 1 +     20839 A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4293360 1 +  10818551 a
i Trichechus_manatus.JH594705.1                          C 0 I 1
s Tupaia_chinensis.KB320699.1                              2155702 1 +   4065304 a
i Tupaia_chinensis.KB320699.1                            C 0 I 1
s Tupaia_tana.TupTan_flattened_line_97126                     9355 1 -     10553 A
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 1
s Uropsilus_gracilis.UroGra_scaffold_12083                   53428 1 -     77625 G
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 1
s Ursus_maritimus.KK499267.1                               4850561 1 -   5085361 a
i Ursus_maritimus.KK499267.1                             C 0 I 1
s Vicugna_pacos.KN270157.1                                 5372007 1 -   5488506 a
i Vicugna_pacos.KN270157.1                               C 0 I 7
s Vulpes_lagopus.VulLag_flattened_line_30954                 10914 1 -     43706 A
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 1
s Zalophus_californianus.ZalCal_flattened_line_17732          5490 1 +     86975 a
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 1
s Zapus_hudsonius.ZapHud_scaffold_11398                      15002 1 +     63895 A
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 1
e Saguinus_labiatus.k141_285685                               8499 0 +      8564 C
e Chiropotes_albinasus.k141_2206961                            243 0 -     15524 C
e Callithrix_geoffroyi.k119_512088                            5259 0 +      5267 C
e Aotus_vociferans.k141_344750                               28684 0 -     47192 C
e Aotus_trivirgatus.k141_2152450                             15560 0 -     34685 C
e Aotus_nancymaae.KZ198451.1                               4298165 214 -   5030052 T
e Aotus_griseimembra.k141_2240599                            15558 0 -     34016 C
e Aotus_azarae.k141_3104676                                  15741 207 -     33861 T
e Alouatta_seniculus.k141_117119                             14962 21 +     50774 I
e Alouatta_puruensis.k141_362188                               301 0 +      5663 C
e Alouatta_palliata.k141_2135620                              3798 202 +     47717 T
e Alouatta_nigerrima.k141_3472759                            18209 0 -     18578 C
e Alouatta_macconnelli.k141_918386                             623 0 -      9457 C
e Alouatta_juara.k141_1509701                                24902 0 +     25266 C
e Alouatta_discolor.k141_566626                              11280 196 +     28687 T
e Alouatta_caraya.k141_1701091                                 629 0 -     36483 C
e Alouatta_belzebul.k141_3560514                              7515 0 +     51355 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Xerus_inauris.XerIna_scaffold_2302                          1179 7 +    224448 I
e Varecia_variegata.k141_1128296                             11582 0 +     24756 C
e Varecia_rubra.k141_590885                                  11523 0 +     50397 C
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Spermophilus_dauricus.KZ294078.1                         1954051 7 -   3870691 I
e Sorex_araneus.JH798187.1                                13651056 93 -  18376816 I
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Propithecus_verreauxi.k141_956661                           4907 5 -      6182 I
e Propithecus_tattersalli.k141_790011                        28684 5 -     67325 I
e Propithecus_perrieri.k141_1200571                           4859 5 -     24134 I
e Propithecus_edwardsi.k141_1176054                          26672 5 +     35766 I
e Propithecus_diadema.k141_58108                              1194 5 -     13098 I
e Propithecus_coronatus.k141_347390                          29151 5 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     990839 5 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2596858 0 -   4620579 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              506767 7 -   2017862 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              5056 0 +     14296 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Mirza_zaza.k141_952172                                      9148 0 -     37649 C
e Microcebus_murinus.CM007674.1                           18291603 0 -  93316391 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Marmota_marmota.CZRN01000018.1                          33103196 7 -  40650429 I
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Lepilemur_septentrionalis.k141_185316                      27069 0 +     54090 C
e Lepilemur_ruficaudatus.k141_121139                          1671 0 +     25010 C
e Lepilemur_dorsalis.k141_577674                             29133 0 +     45836 C
e Lepilemur_ankaranensis.k141_596936                         11072 0 -     23766 C
e Lemur_catta.scaffold_24                                 15524178 0 -  30322482 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Indri_indri.k141_3655594                                   22621 5 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7520996 7 -   7955117 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Hapalemur_occidentalis.k141_907772                         13663 0 -     16460 C
e Hapalemur_meridionalis.k141_248335                         13826 0 -     41752 C
e Hapalemur_griseus.k141_1511508                             13725 0 +     18253 C
e Hapalemur_gilberti.k141_488810                             12086 0 -     15286 C
e Hapalemur_alaotrensis.k141_170648                           6937 0 -     19426 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Eulemur_sanfordi.k141_1122526                              13878 0 +    111500 C
e Eulemur_rufus.k141_1476633                                  4305 0 -     17153 C
e Eulemur_rubriventer.k141_774594                              252 0 +     13026 C
e Eulemur_mongoz.k141_232305                                 10761 0 +     97555 C
e Eulemur_macaco.k141_1562045                                12831 0 +     75513 C
e Eulemur_fulvus.k141_544389                                 14069 0 +     23973 C
e Eulemur_flavifrons.k141_1184614                            12834 0 +     26330 C
e Eulemur_coronatus.k141_885031                              15630 8 -     25546 I
e Eulemur_collaris.k141_377015                                6606 0 -     16928 C
e Eulemur_albifrons.k141_342033                              13892 0 -     14127 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Crocidura_indochinensis.CroInd_scaffold_37019               3028 88 -     19598 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 50301 8 +     63868 I
e Cheirogaleus_medius.k141_1055463                           16545 0 +     57038 C
e Cheirogaleus_major.k141_333249                             21180 0 -     52598 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     93143 43 +    217609 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              54422 10 +     85213 I
e Avahi_laniger.k141_765380                                  53795 15 -     92717 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6941  3 +     62944 a-------------a-g
s Acinonyx_jubatus.LLWD01001279.1                           827428  3 -   1699592 g-------------a-c
i Acinonyx_jubatus.LLWD01001279.1                        I 1 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     70895  3 +     87051 A-------------G-C
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 1 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510702  3 -  29979442 g-------------a-c
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 1 C 0
s Ailurus_fulgens.LNAC01001112.1                             79478  3 -    347723 g-------------a-t
i Ailurus_fulgens.LNAC01001112.1                         I 1 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     74607  3 -     89534 A-------------A-T
i Allactaga_bullata.AllBul_scaffold_9566                 I 1 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14870  4 -     52922 a-------------aat
i Allenopithecus_nigroviridis.k141_3361533               C 0 T 106
s Allochrocebus_lhoesti.k141_4309873                         14785  4 -     28001 a-------------aat
i Allochrocebus_lhoesti.k141_4309873                     C 0 T 105
s Allochrocebus_preussi.k141_1442296                          5283  4 -     18505 a-------------aat
i Allochrocebus_preussi.k141_1442296                     C 0 T 107
s Allochrocebus_solatus.k141_166128                           6135  4 -     12518 a-------------aat
i Allochrocebus_solatus.k141_166128                      C 0 T 105
s Alouatta_belzebul.k141_3560514                              7515  3 +     51355 g-------------g-g
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                 629  3 -     36483 a-------------a-a
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_juara.k141_1509701                                24902  3 +     25266 a-------------a-a
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_918386                             623  3 -      9457 a-------------a-a
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_3472759                            18209  3 -     18578 a-------------a-a
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              3596  3 +     47717 g-------------g-g
i Alouatta_palliata.k141_2135620                         T 202 C 0
s Alouatta_puruensis.k141_362188                               301  3 +      5663 a-------------a-a
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185474  3 +    412891 G-------------A-C
i Anoura_caudifer.AnoCau_scaffold_1412                   I 1 C 0
s Aotus_azarae.k141_3104676                                  15534  1 -     33861 g----------------
i Aotus_azarae.k141_3104676                              T 207 C 0
s Aotus_griseimembra.k141_2240599                            15558  3 -     34016 g-------------g-g
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297951  3 -   5030052 g-------------g-g
i Aotus_nancymaae.KZ198451.1                             T 214 C 0
s Aotus_trivirgatus.k141_2152450                             15560  3 -     34685 g-------------g-g
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28684  3 -     47192 g-------------g-g
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      12724  5 +     20879 A-----------GAA-C
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 1 C 0
s Arctocebus_calabarensis.k141_2318572                       11579  3 +     14667 G-------------A-C
i Arctocebus_calabarensis.k141_2318572                   I 1 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4882  3 +     43469 G-------------A-C
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 1 C 0
s Avahi_laniger.k141_765380                                  53810  2 -     92717 --------------A-C
i Avahi_laniger.k141_765380                              I 15 C 0
s Avahi_peyrierasi.k141_1424874                              54432  2 +     85213 --------------A-C
i Avahi_peyrierasi.k141_1424874                          I 10 C 0
s Callibella_humilis.k141_1278103                             5574  3 -     10423 a-------------a-t
i Callibella_humilis.k141_1278103                        C 0 T 277
s Callimico_goeldii.k141_1091182                             25043  3 +     31915 A-------------A-T
i Callimico_goeldii.k141_1091182                         C 0 T 279
s Callithrix_geoffroyi.k119_512088                            5259  3 +      5267 g-------------g-a
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590728  3 - 189096842 a-------------a-t
i Callithrix_jacchus.pat_scaffold_3                      C 0 T 255
s Callithrix_kuhlii.k119_1168854                               127  3 -     12329 A-------------A-T
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002515  3 -  17673402 g-------------a-c
i Camelus_bactrianus.KN276810.1                          I 7 C 0
s Camelus_dromedarius.KN272107.1                           2334973  3 -   7040546 g-------------a-c
i Camelus_dromedarius.KN272107.1                         I 7 C 0
s Camelus_ferus.KB017975.1                                  403257  3 -   1652518 g-------------a-c
i Camelus_ferus.KB017975.1                               I 7 C 0
s CanFam4.chr16                                           17799293  3 -  60362399 G-------------A-C
i CanFam4.chr16                                          I 1 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                       41  3 -     43241 G-------------A-C
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 1 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034736  3 -   9314153 g-------------a-c
i Canis_lupus_dingo.QKWQ01000480.1                       I 1 C 0
s Canis_lupus_familiaris.chr16                            17959212  3 -  59632846 g-------------a-c
i Canis_lupus_familiaris.chr16                           I 1 C 0
s Canis_lupus_orion.HG994398.1                            18500513  3 +  63665305 g-------------a-c
i Canis_lupus_orion.HG994398.1                           I 1 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1173  3 -     12242 A-------------G-T
i Capromys_pilorides.CapPil_scaffold_65020               I 1 C 0
s Carlito_syrichta.NW_007259797.1                           156106  3 -    496798 g-------------a-c
i Carlito_syrichta.NW_007259797.1                        I 1 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5231  3 -     11696 G-------------A-C
i Carollia_perspicillata.CarPer_scaffold_92756           I 1 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137193  3 +    179628 A-------------A-T
i Castor_canadensis.CasCan_scaffold_2074                 I 1 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     93186  3 +    217609 A-------------A-C
i Catagonus_wagneri.CatWag_scaffold_2839                 I 43 C 0
s Cebuella_niveiventris.k141_1251222                         10209  3 -     11392 a-------------a-t
i Cebuella_niveiventris.k141_1251222                     C 0 T 291
s Cebuella_pygmaea.k141_1309012                               6277  3 -      7577 a-------------a-t
i Cebuella_pygmaea.k141_1309012                          C 0 T 261
s Cebus_albifrons.Contig27                                25652946  3 +  26074798 a-------------a-t
i Cebus_albifrons.Contig27                               C 0 T 345
s Cebus_olivaceus.k141_1764483                                 884  3 +     28840 A-------------A-T
i Cebus_olivaceus.k141_1764483                           C 0 I 1
s Cebus_unicolor.k141_1837183                                  609  3 +     14051 A-------------A-T
i Cebus_unicolor.k141_1837183                            C 0 I 1
s Cephalopachus_bancanus.k141_1423433                         5604  3 +     31688 g-------------a-c
i Cephalopachus_bancanus.k141_1423433                    I 1 T 117
s Ceratotherium_simum.JH767749.1                          12231573  3 +  27778364 g-------------a-c
i Ceratotherium_simum.JH767749.1                         I 1 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2600  3 -     25243 G-------------A-C
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 1 C 0
s Cercocebus_atys.KQ010504.1                               4475800  4 +   4669795 a-------------aat
i Cercocebus_atys.KQ010504.1                             C 0 T 115
s Cercocebus_chrysogaster.k141_1540778                         304  4 +     17872 a-------------aaT
i Cercocebus_chrysogaster.k141_1540778                   C 0 T 115
s Cercocebus_lunulatus.k141_3342297                            961  4 -     14043 a-------------aat
i Cercocebus_lunulatus.k141_3342297                      C 0 T 115
s Cercocebus_torquatus.k141_3057011                           8994  4 +     27781 A-------------AAT
i Cercocebus_torquatus.k141_3057011                      C 0 T 112
s Cercopithecus_ascanius.k141_1024104                         9158  4 -     20310 a-------------aat
i Cercopithecus_ascanius.k141_1024104                    C 0 T 107
s Cercopithecus_cephus.k141_1078548                          12138  4 +     29689 A-------------AAT
i Cercopithecus_cephus.k141_1078548                      C 0 T 108
s Cercopithecus_diana.k141_1150327                            6891  4 -     20078 a-------------aat
i Cercopithecus_diana.k141_1150327                       C 0 T 107
s Cercopithecus_hamlyni.k141_187466                          14808  4 -     27936 a-------------aat
i Cercopithecus_hamlyni.k141_187466                      C 0 T 101
s Cercopithecus_lowei.k141_1854285                            3678  4 -     17152 a-------------aat
i Cercopithecus_lowei.k141_1854285                       C 0 T 107
s Cercopithecus_albogularis.ctg5                                38817217  4 +  39242232 A-------------AAT
i Cercopithecus_albogularis.ctg5                               C 0 T 107
s Cercopithecus_mona.ctg39                                21222909  4 -  21565898 a-------------aat
i Cercopithecus_mona.ctg39                               C 0 T 107
s Cercopithecus_neglectus.k141_2526306                       40027  4 -     53127 a-------------aat
i Cercopithecus_neglectus.k141_2526306                   C 0 T 107
s Cercopithecus_nictitans.k141_1119862                         278  4 +     13442 A-------------AAT
i Cercopithecus_nictitans.k141_1119862                   C 0 T 107
s Cercopithecus_petaurista.k141_807961                       14827  4 -     27947 a-------------aat
i Cercopithecus_petaurista.k141_807961                   C 0 T 107
s Cercopithecus_pogonias.k141_822820                         14803  4 +     17596 A-------------AAT
i Cercopithecus_pogonias.k141_822820                     C 0 T 107
s Cercopithecus_roloway.k141_2581234                           850  4 +     14005 A-------------AAT
i Cercopithecus_roloway.k141_2581234                     C 0 T 107
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             654  3 -      8501 G-------------A-C
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       I 1 C 0
s Cheirogaleus_major.k141_333249                             21180  2 -     52598 --------------A-G
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16545  2 +     57038 --------------a-g
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1252921  3 +   2543920 A-------------A-T
i Chinchilla_lanigera.JH722012.1                         I 1 C 0
s Chiropotes_albinasus.k141_2206961                            243 16 -     15524 aaggaagggagggag-g
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18428787  4 -  18827391 a-------------aat
i Chlorocebus_aethiops.ctg25                             C 0 T 107
s Chlorocebus_pygerythrus.k141_1025673                       15224  4 -     50209 a-------------aat
i Chlorocebus_pygerythrus.k141_1025673                   C 0 T 107
s Chlorocebus_sabaeus.CM001947.1                         135422224  4 + 135778131 a-------------aat
i Chlorocebus_sabaeus.CM001947.1                         C 0 T 107
s Choloepus_didactylus.ChoDid_scaffold_45914                 18434  3 +     19366 G-------------A-C
i Choloepus_didactylus.ChoDid_scaffold_45914             I 1 C 0
s Choloepus_hoffmanni.KN194906.1                            173511  3 +    839153 g-------------A-C
i Choloepus_hoffmanni.KN194906.1                         I 1 C 0
s Colobus_angolensis.KN981557.1                            1910627  3 +   2368649 a-------------a-a
i Colobus_angolensis.KN981557.1                          T 109 C 0
s Colobus_guereza.LG01                                   199948988  3 + 200372422 A-------------A-T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37161  3 +     84244 a-------------a-a
i Colobus_polykomos.k141_906115                          T 109 C 0
s Condylura_cristata.JH655891.1                           17548214  3 -  53390261 g-------------a-c
i Condylura_cristata.JH655891.1                          I 1 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14532  3 -     20389 G-------------A-T
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 1 C 0
s Cricetulus_griseus.LT883664.1                           11667662  3 + 224834208 A-------------A-C
i Cricetulus_griseus.LT883664.1                          I 1 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               3116  3 -     19598 T-------------A-C
i Crocidura_indochinensis.CroInd_scaffold_37019          I 88 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28615  3 -     87169 G-------------A-C
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 1 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837193  3 +   1526836 A-------------C-T
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 1 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35881  3 +     51376 A-------------G-T
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 1 C 0
s Dasypus_novemcinctus.JH564415.1                            63661  3 +   2246927 g-------------a-t
i Dasypus_novemcinctus.JH564415.1                        I 1 C 0
s Daubentonia_madagascariensis.ctg71                      12537406  3 -  12879189 G-------------A-C
i Daubentonia_madagascariensis.ctg71                     I 1 C 0
s Desmodus_rotundus.KZ672289.1                             8630248  3 +  20541912 g-------------a-c
i Desmodus_rotundus.KZ672289.1                           I 1 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673424  3 +   1390856 g-------------a-c
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 1 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6176  3 +    198055 G-------------A-C
i Diceros_bicornis.DicBicMic_scaffold_5955               I 1 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36515  3 +     67921 A-------------G-T
i Dinomys_branickii.DinBra_scaffold_21862                I 1 C 0
s Echinops_telfairi.JH980293.1                            48780695  2 + 111700974 g-------------a--
i Echinops_telfairi.JH980293.1                           I 1 C 0
s Eidolon_helvum.KE759718.1                                  10649  3 +     11740 g-------------a-t
i Eidolon_helvum.KE759718.1                              I 1 C 0
s Ellobius_lutescens.LOEQ01008920.1                          20396  3 -    110024 A-------------G-C
i Ellobius_lutescens.LOEQ01008920.1                      I 1 C 0
s Ellobius_talpinus.LOJH01081419.1                             527  3 +      8657 A-------------G-C
i Ellobius_talpinus.LOJH01081419.1                       I 1 C 0
s Enhydra_lutris.KZ291758.1                               16329436  3 -  41312741 g-------------a-c
i Enhydra_lutris.KZ291758.1                              I 1 C 0
s Eptesicus_fuscus.JH977646.1                              2145851  3 -  14770903 g-------------a-c
i Eptesicus_fuscus.JH977646.1                            I 1 C 0
s Equus_asinus.JREZ01000139.1                              1283678  3 +   4378816 g-------------a-c
i Equus_asinus.JREZ01000139.1                            I 1 C 0
s Equus_caballus.CM000403.2                               18531498  3 -  39960074 g-------------a-c
i Equus_caballus.CM000403.2                              I 1 C 0
s Equus_przewalskii.KK951119.1                               33527  3 +    498745 g-------------a-c
i Equus_przewalskii.KK951119.1                           I 1 C 0
s Erinaceus_europaeus.JH835339.1                           3328356  3 -   7059049 g-------------a-c
i Erinaceus_europaeus.JH835339.1                         I 1 C 0
s Erythrocebus_patas.Contig38                             21205392  4 -  21539334 a-------------aat
i Erythrocebus_patas.Contig38                            C 0 T 105
s Eulemur_albifrons.k141_342033                              13892  2 -     14127 --------------A-C
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6606  2 -     16928 --------------A-C
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15638  2 -     25546 --------------A-A
i Eulemur_coronatus.k141_885031                          I 8 C 0
s Eulemur_flavifrons.k141_1184614                            12834  2 +     26330 --------------a-C
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14069  2 +     23973 --------------A-c
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12831  2 +     75513 --------------a-C
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10761  2 +     97555 --------------a-c
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              252  2 +     13026 --------------a-c
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4305  2 -     17153 --------------A-C
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13878  2 +    111500 --------------A-c
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237079  3 + 206538554 g-------------a-c
i Felis_catus.CM001381.2                                 I 1 C 0
s Felis_catus_fca126.CM031415.1                           20195922  3 + 205367284 g-------------a-c
i Felis_catus_fca126.CM031415.1                          I 1 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  9666  3 -     36744 G-------------A-C
i Felis_nigripes.FelNig_flattened_line_20823             I 1 C 0
s Fukomys_damarensis.KN121974.1                             850549  3 +   3816255 a-------------a-t
i Fukomys_damarensis.KN121974.1                          I 1 C 0
s Galago_moholi.ctg2040                                     426722  3 -    453645 G-------------A-C
i Galago_moholi.ctg2040                                  I 1 C 0
s Galago_senegalensis.k141_631886                             4412  3 +     11339 G-------------A-C
i Galago_senegalensis.k141_631886                        I 1 C 0
s Galagoides_demidoff.k141_1711393                            1710  3 +     41679 G-------------A-C
i Galagoides_demidoff.k141_1711393                       I 1 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1307  3 -      9135 a-------------a-c
i Galeopterus_variegatus.GalVar_scaffold_108840          I 1 C 0
s Glis_glis.GliGli_scaffold_19807                            31474  3 +     49224 A-------------A-T
i Glis_glis.GliGli_scaffold_19807                        I 1 C 0
s Gorilla_beringei.k141_3596273                              16196  3 -     32273 a-------------a-c
i Gorilla_beringei.k141_3596273                          C 0 T 114
s Gorilla_gorilla.LT578341.1                             186338333  3 + 186649187 a-------------a-c
i Gorilla_gorilla.LT578341.1                             C 0 T 113
s Graphiurus_murinus.GraMur_scaffold_10447                   32716  3 +     78134 A-------------A-T
i Graphiurus_murinus.GraMur_scaffold_10447               I 1 C 0
s Hapalemur_alaotrensis.k141_170648                           6937  2 -     19426 --------------A-C
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12086  2 -     15286 --------------A-C
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13725  2 +     18253 --------------a-C
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13826  2 -     41752 --------------A-C
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13663  2 -     16460 --------------A-C
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242448  3 +    327341 G-------------A-C
i Helogale_parvula.HelPar_flattened_line_2585            I 1 C 0
s Heterocephalus_glaber.JH602082.1                        20662338  3 +  22651954 A-------------A-T
i Heterocephalus_glaber.JH602082.1                       I 1 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1008  3 +      7595 G-------------G-C
i Heterohyrax_brucei.HetBruBak_scaffold_122365           I 1 C 0
s Hoolock_leuconedys.ctg274                                    434995  3 +    630532 a-------------a-T
i Hoolock_leuconedys.ctg274                                 C 0 T 101
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45142  3 +     55795 G-------------A-C
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 1 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83227  3 +    135385 A-------------G-T
i Hystrix_cristata.HysCri_scaffold_5660                  I 1 C 0
s Indri_indri.k141_3655594                                   22626  2 +     31101 --------------a-C
i Indri_indri.k141_3655594                               I 5 C 0
s Jaculus_jaculus.JH725527.1                               8276908  3 -   9596543 A-------------A-T
i Jaculus_jaculus.JH725527.1                             I 1 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    16496  3 -     42476 G-------------A-C
i Lasiurus_borealis.LasBor_scaffold_32767                I 1 C 0
s Lemur_catta.scaffold_24                                 15524178  2 -  30322482 --------------A-C
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7853  3 +     64341 A-------------A-T
i Leontocebus_fuscicollis.k141_1820339                   C 0 T 281
s Leontocebus_illigeri.k141_1304848                            193  3 -     35062 a-------------a-t
i Leontocebus_illigeri.k141_1304848                      C 0 I 1
s Leontocebus_nigricollis.k141_4610752                        7881  3 +     35603 A-------------A-T
i Leontocebus_nigricollis.k141_4610752                   C 0 T 264
s Leontopithecus_chrysomelas.k141_1519602                    29297  3 +     38576 A-------------A-T
i Leontopithecus_chrysomelas.k141_1519602                C 0 T 248
s Leontopithecus_rosalia.k141_464620                         25997  3 +     66356 A-------------A-T
i Leontopithecus_rosalia.k141_464620                     C 0 T 251
s Leptonychotes_weddellii.KB714746.1                       3043175  3 +   3914936 g-------------a-c
i Leptonychotes_weddellii.KB714746.1                     I 1 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6597  3 -     14121 a-------------a-c
i Lepus_americanus.LepAme_scaffold_107385                I 2 C 0
s Lophocebus_aterrimus.ctg367                              1437345  4 +   1826925 A-------------AAT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5971  3 +     11245 G-------------A-C
i Loris_lydekkerianus.k141_2539221                       I 1 C 0
s Loris_tardigradus.ctg83                                  1004791  3 +   6120653 G-------------A-C
i Loris_tardigradus.ctg83                                I 1 C 0
s Loxodonta_africana.GL010049.1                            4217441  3 -  43346337 g-------------a-c
i Loxodonta_africana.GL010049.1                          I 1 C 0
s Lycaon_pictus.CM007581.1                                17955452  3 -  59628241 N-------------N-N
i Lycaon_pictus.CM007581.1                               I 1 C 0
s Macaca_arctoides.k141_2326796                               7051  3 +     40492 a-------------a-a
i Macaca_arctoides.k141_2326796                          T 106 C 0
s Macaca_assamensis.Contig5                               59676310  3 +  60120075 a-------------a-a
i Macaca_assamensis.Contig5                              T 106 C 0
s Macaca_cyclopis.k119_18836                                 12823  3 -     26193 a-------------a-a
i Macaca_cyclopis.k119_18836                             T 109 C 0
s Macaca_fascicularis.k141_814140                            80607  3 -    114318 a-------------a-a
i Macaca_fascicularis.k141_814140                        T 109 C 0
s Macaca_fuscata.k119_255327                                  6298  3 -     23192 a-------------a-a
i Macaca_fuscata.k119_255327                             T 105 C 0
s Macaca_leonina.k141_3550399                                15767  3 -     29190 a-------------a-a
i Macaca_leonina.k141_3550399                            T 109 C 0
s Macaca_maura.k141_2733130                                  24332  3 +     37952 a-------------a-a
i Macaca_maura.k141_2733130                              T 109 C 0
s Macaca_mulatta.NC_041758.1                             186839421  3 + 187317192 a-------------a-a
i Macaca_mulatta.NC_041758.1                             T 109 I 109
s Macaca_nemestrina.KQ007038.1                            25457984  3 -  25927173 a-------------a-a
i Macaca_nemestrina.KQ007038.1                           T 109 C 0
s Macaca_nigra.k141_1655396                                  80180  3 +     89720 a-------------a-a
i Macaca_nigra.k141_1655396                              T 109 C 0
s Macaca_radiata.k141_3680011                                 7181  3 +     20474 a-------------a-a
i Macaca_radiata.k141_3680011                            T 109 C 0
s Macaca_siberu.k141_635500                                   6981  3 -     14993 a-------------a-a
i Macaca_siberu.k141_635500                              T 109 C 0
s Macaca_silenus.Contig273                                  329847  3 -    668171 a-------------a-a
i Macaca_silenus.Contig273                               T 109 C 0
s Macaca_thibetana.k99_256239                                 5297  3 -     24072 a-------------a-a
i Macaca_thibetana.k99_256239                            T 106 C 0
s Macaca_tonkeana.k141_1498238                               25919  3 -     45290 a-------------a-a
i Macaca_tonkeana.k141_1498238                           T 109 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90742  3 +     94391 G-------------A-T
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 1 C 0
s Mandrillus_leucophaeus.scaffold280                      23937620  4 -  24302211 a-------------aat
i Mandrillus_leucophaeus.scaffold280                     C 0 T 115
s Mandrillus_sphinx.Contig270                               351744  4 +    752769 A-------------AAT
i Mandrillus_sphinx.Contig270                            C 0 T 115
s Manis_javanica.JSZB01003497.1                              18618  3 +    737560 g-------------a-c
i Manis_javanica.JSZB01003497.1                          I 1 C 0
s Manis_pentadactyla.KN006162.1                              50611  3 -    317179 g-------------a-c
i Manis_pentadactyla.KN006162.1                          I 1 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        10457  3 -    207569 G-------------A-T
i Megaderma_lyra.MegLyr_scaffold_4542                    I 1 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10173  3 +     13704 G-------------A-C
i Mellivora_capensis.MelCap_flattened_line_69365         I 1 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 32843  3 +    140813 T-------------G-C
i Meriones_unguiculatus.MerUng_scaffold_7390             I 1 C 0
s Mesocricetus_auratus.KB708134.1                         12182337  3 -  29670104 A-------------T-C
i Mesocricetus_auratus.KB708134.1                        I 1 C 0
s Mico_argentatus.k141_1239457                                6088  3 -      7380 a-------------a-t
i Mico_argentatus.k141_1239457                           C 0 T 255
s Mico_humeralifer.k141_2457295                                317  3 +      1079 A-------------A-T
i Mico_humeralifer.k141_2457295                          C 0 T 319
s Mico_schneideri.k141_1950671                                      6100  3 -      7356 a-------------a-t
i Mico_schneideri.k141_1950671                                 C 0 T 255
s Microcebus_murinus.CM007674.1                           18291603  2 -  93316391 --------------a-c
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    22444  2 -    145209 G-------------A--
i Microgale_talazaci.MicTal_scaffold_6613                I 1 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                15775  3 -     19307 G-------------A-C
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 1 C 0
s Microtus_ochrogaster.CM001695.1                         11260575  3 -  27267610 A-------------G-C
i Microtus_ochrogaster.CM001695.1                        I 1 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850737  3 +   8254450 g-------------a-c
i Miniopterus_natalensis.LDJU01000034.1                  I 1 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34418  3 +     64694 G-------------A-C
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 1 C 0
s Miopithecus_ogouensis.k141_534055                           9324  4 -     28506 a-------------aat
i Miopithecus_ogouensis.k141_534055                      C 0 T 106
s Mirounga_angustirostris.MirAng_flattened_line_93702         6043  3 -      8324 G-------------A-C
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 1 C 0
s Mirza_zaza.k141_952172                                      9148  2 -     37649 --------------A-C
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141747  3 -    366855 G-------------A-C
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 1 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35548  3 +     37127 G-------------A-C
i Mungos_mungo.MunMun_flattened_line_23663               I 1 C 0
s Murina_feae.MurFea_scaffold_85699                           6947  3 +     14753 G-------------A-C
i Murina_feae.MurFea_scaffold_85699                      I 1 C 0
s Mus_caroli.LT608237.1                                   84361457  3 - 120012414 A-------------g-c
i Mus_caroli.LT608237.1                                  I 1 C 0
s Mus_musculus.chr8                                       87650455  3 - 129401213 a-------------g-c
i Mus_musculus.chr8                                      I 1 C 0
s Mus_pahari.LT608297.1                                   31355114  3 -  89631738 A-------------G-C
i Mus_pahari.LT608297.1                                  I 1 C 0
s Mus_spretus.CM004101.1                                  90752516  3 - 130317789 a-------------g-c
i Mus_spretus.CM004101.1                                 I 1 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              5056  2 +     14296 --------------A-T
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               301586  3 -  14710649 g-------------a-c
i Mustela_putorius.JH418006.1                            I 1 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71360  3 -     80779 A-------------G-T
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 1 C 0
s Myotis_brandtii.KE162005.1                                280590  3 -  10118263 g-------------a-c
i Myotis_brandtii.KE162005.1                             I 1 C 0
s Myotis_davidii.KB100139.1                                1587855  3 -   6019432 g-------------a-c
i Myotis_davidii.KB100139.1                              I 1 C 0
s Myotis_lucifugus.GL429869.1                              3903944  3 -   4330536 g-------------a-c
i Myotis_lucifugus.GL429869.1                            I 1 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                          93  3 +      1835 G-------------A-C
i Myotis_myotis.MyoMyo_scaffold_281845                   I 1 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189385  3 +    196477 G-------------A-C
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 1 C 0
s Nannospalax_galili.KL204047.1                            2034178  3 -   3037898 A-------------a-t
i Nannospalax_galili.KL204047.1                          I 1 C 0
s Nasalis_larvatus.k141_413338                               15214  3 +     21681 a-------------a-a
i Nasalis_larvatus.k141_413338                           T 113 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20307629  3 +  31847680 g-------------a-c
i Neomonachus_schauinslandi.NINY01007730.1               I 1 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149520  3 -   9404916 g-------------a-c
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 1 C 0
s Nycticebus_bengalensis.LG01                            102586335  3 - 196305487 G-------------A-C
i Nycticebus_bengalensis.LG01                            I 1 C 0
s Nycticebus_coucang.k141_1127096                              259  3 +      2075 g-------------a-c
i Nycticebus_coucang.k141_1127096                        I 1 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761689  3 + 199412804 G-------------A-C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 1 C 0
s Ochotona_princeps.JH802162.1                             1363661  3 +   3988456 a-------------a-t
i Ochotona_princeps.JH802162.1                           I 1 C 0
s Octodon_degus.JH651603.1                                  746970  3 +  11899542 A-------------G-T
i Octodon_degus.JH651603.1                               I 1 C 0
s Odobenus_rosmarus.KB229312.1                              506774  3 -   2017862 g-------------a-c
i Odobenus_rosmarus.KB229312.1                           I 7 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   25243  3 +     28053 A-------------G-C
i Ondatra_zibethicus.OndZib_scaffold_46174               I 1 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    80243  3 +    102263 A-------------G-C
i Onychomys_torridus.OnyTor_scaffold_2986                I 1 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9961  3 -     18566 G-------------A-C
i Orycteropus_afer.OryAfe_flattened_line_144387          I 1 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147457  3 + 174332312 a-------------a-c
i Oryctolagus_cuniculus.CM000791.1                       I 3 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462468  3 -    559221 g-------------a-c
i Otocyon_megalotis.JAEUCK010005147.1                    I 1 C 0
s Otolemur_crassicaudatus.k141_222918                         4242  3 +      8798 G-------------A-C
i Otolemur_crassicaudatus.k141_222918                    I 1 C 0
s Otolemur_garnettii.GL873799.1                             696405  3 -   1103335 g-------------a-c
i Otolemur_garnettii.GL873799.1                          I 1 C 0
s Pan_paniscus.KQ411613.1                                    44284  3 +     80009 a-------------a-c
i Pan_paniscus.KQ411613.1                                C 0 T 113
s Pan_troglodytes.CM009242.2                             189143186  3 + 189151597 a-------------a-c
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  151281  3 +    230217 G-------------A-C
i Panthera_onca.PanOnc_flattened_line_3271               I 1 C 0
s Panthera_pardus.KV860321.1                                264490  3 +  18783137 g-------------a-c
i Panthera_pardus.KV860321.1                             I 1 C 0
s Panthera_tigris.KE722367.1                               4721369  3 -   8748460 g-------------a-c
i Panthera_tigris.KE722367.1                             I 1 C 0
s Papio_anubis.CM001495.2                                183443422  4 + 183742232 a-------------aat
i Papio_anubis.CM001495.2                                C 0 T 115
s Papio_cynocephalus.k141_4307930                             7068  4 +     20448 A-------------AAT
i Papio_cynocephalus.k141_4307930                        C 0 T 115
s Papio_hamadryas.Contig39                                20563880  4 +  20919399 A-------------AAT
i Papio_hamadryas.Contig39                               C 0 T 115
s Papio_kindae.k141_1936966                                   5812  4 +     41871 A-------------AAT
i Papio_kindae.k141_1936966                              C 0 T 115
s Papio_papio.k141_802527                                     9105  4 +     27711 A-------------AAT
i Papio_papio.k141_802527                                C 0 T 115
s Papio_ursinus.k141_3428135                                  9174  4 +      9205 A-------------AAT
i Papio_ursinus.k141_3428135                             C 0 T 115
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12778  3 -     78924 G-------------A-C
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s Perodicticus_ibeanus.k141_855320                           10223  3 +     13100 G-------------A-C
i Perodicticus_ibeanus.k141_855320                       I 1 C 0
s Perodicticus_potto.k141_1092580                             8629  3 +     25941 G-------------A-C
i Perodicticus_potto.k141_1092580                        I 1 C 0
s Peromyscus_maniculatus.KI615324.1                       18194869  3 -  18517816 A-------------G-C
i Peromyscus_maniculatus.KI615324.1                      I 1 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28239  3 -     29689 A-------------G-T
i Petromus_typicus.PetTyp_scaffold_42190                 I 1 C 0
s Piliocolobus_badius.k141_1234363                           43709  3 +     62158 a-------------a-a
i Piliocolobus_badius.k141_1234363                       T 109 C 0
s Piliocolobus_gordonorum.k141_381342                        38456  3 +     89929 a-------------a-a
i Piliocolobus_gordonorum.k141_381342                    T 109 C 0
s Piliocolobus_kirkii.k141_448987                            39872  3 +     51399 a-------------a-a
i Piliocolobus_kirkii.k141_448987                        T 109 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296110  3 -  14605196 a-------------a-a
i Piliocolobus_tephrosceles.PDMG02000141.1               T 109 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1887  2 +     22620 G-------------A--
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 1 C 0
s Pongo_abelii.CM009266.2                                189131322  3 + 189387572 a-------------a-t
i Pongo_abelii.CM009266.2                                C 0 T 109
s Pongo_pygmaeus.ctg66                                     9570929  3 +   9816681 A-------------A-T
i Pongo_pygmaeus.ctg66                                   C 0 T 108
s Presbytis_comata.k141_677006                               73390  3 -     81375 a-------------a-a
i Presbytis_comata.k141_677006                           T 113 C 0
s Presbytis_mitrata.k141_1087752                              5210  3 +     19060 a-------------a-a
i Presbytis_mitrata.k141_1087752                         T 113 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 13463  3 -     22811 G-------------G-C
i Procavia_capensis.ProCapCap_scaffold_85530             I 1 C 0
s Prolemur_simus.MPIZ01000396.1                            2596858  2 -   4620579 --------------a-c
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990844  2 +   2598838 --------------a-c
i Propithecus_coquerelli.NW_012148875.1                  I 5 C 0
s Propithecus_coronatus.k141_347390                          29156  2 +     38485 --------------A-C
i Propithecus_coronatus.k141_347390                      I 5 C 0
s Propithecus_diadema.k141_58108                              1199  2 -     13098 --------------A-C
i Propithecus_diadema.k141_58108                         I 5 C 0
s Propithecus_edwardsi.k141_1176054                          26677  2 +     35766 --------------A-C
i Propithecus_edwardsi.k141_1176054                      I 5 C 0
s Propithecus_perrieri.k141_1200571                           4864  2 -     24134 --------------A-C
i Propithecus_perrieri.k141_1200571                      I 5 C 0
s Propithecus_tattersalli.k141_790011                        28689  2 -     67325 --------------A-C
i Propithecus_tattersalli.k141_790011                    I 5 C 0
s Propithecus_verreauxi.k141_956661                           4912  2 -      6182 --------------A-C
i Propithecus_verreauxi.k141_956661                      I 5 C 0
s Psammomys_obesus.NESX01036370.1                            10487  3 -     21651 T-------------G-C
i Psammomys_obesus.NESX01036370.1                        I 1 C 0
s Pteronotus_parnellii.KE909381.1                            15202  3 -     21811 g-------------a-c
i Pteronotus_parnellii.KE909381.1                        I 1 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40363  3 +     42204 G-------------A-C
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 1 C 0
s Pteropus_alecto.KB030862.1                              22976908  3 +  28871421 g-------------a-t
i Pteropus_alecto.KB030862.1                             I 1 C 0
s Pteropus_vampyrus.KN534172.1                                6961  3 -      8028 g-------------a-t
i Pteropus_vampyrus.KN534172.1                           I 1 C 0
s Puma_concolor.QAVW01001104.1                            20274435  3 -  38429054 g-------------a-c
i Puma_concolor.QAVW01001104.1                           I 1 C 0
s Pygathrix_cinerea.k141_1153803                             15223  3 -     91421 a-------------a-a
i Pygathrix_cinerea.k141_1153803                         T 113 C 0
s Pygathrix_nigripes_b.ctg100                                 7609343  3 +   7812017 a-------------a-a
i Pygathrix_nigripes_b.ctg100                               T 113 C 0
s Pygathrix_nigripes_a.k141_215492                             15195  3 -     72585 a-------------a-a
i Pygathrix_nigripes_a.k141_215492                         T 113 C 0
s Rattus_norvegicus.chr16                                 53570717  3 +  90668790 A-------------G-C
i Rattus_norvegicus.chr16                                I 1 C 0
s Rhinopithecus_bieti.k119_217274                             6908  3 -     11128 a-------------a-a
i Rhinopithecus_bieti.k119_217274                        T 111 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236368  3 - 195417433 a-------------a-t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7671913  3 +   7961872 a-------------a-a
i Rhinopithecus_strykeri.ctg102                          T 111 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87930  3 -     96226 G-------------A-T
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 1 C 0
s Saguinus_bicolor.k141_8081                                   469  3 +     42994 A-------------A-T
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_57697                                254  3 +      1030 A-------------A-T
i Saguinus_imperator.k141_57697                          C 0 C 0
s Saguinus_inustus.k141_3945547                                333  3 -      8737 a-------------a-t
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_285685                               8499  3 +      8564 a-------------c-t
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209469820  3 + 209938924 A-------------A-T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 8455  3 -      9399 a-------------a-t
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951193  3 - 121099817 a-------------t-t
i Saimiri_boliviensis.NW_024100920.1                     C 0 T 292
s Saimiri_cassiquiarensis.k141_2188234                       23532  3 +     46362 A-------------T-T
i Saimiri_cassiquiarensis.k141_2188234                   C 0 T 175
s Saimiri_macrodon.k141_716185                               23627  3 +     45824 A-------------T-T
i Saimiri_macrodon.k141_716185                           C 0 T 175
s Saimiri_oerstedii.k141_1487881                             40306  3 -     64574 a-------------t-t
i Saimiri_oerstedii.k141_1487881                         C 0 T 226
s Saimiri_sciureus.k141_2278166                               3378  3 -     23631 a-------------t-t
i Saimiri_sciureus.k141_2278166                          C 0 T 292
s Saimiri_ustus.k141_1484609                                 23523  3 -     61129 a-------------t-t
i Saimiri_ustus.k141_1484609                             C 0 T 175
s Sapajus_apella.ctg103                                    5420901  3 -   5703754 a-------------a-t
i Sapajus_apella.ctg103                                  C 0 T 114
s Sapajus_macrocephalus.k141_351809                          56142  3 -     80660 a-------------a-t
i Sapajus_macrocephalus.k141_351809                      C 0 T 313
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153333  3 -    313613 G-------------A-C
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 1 C 0
s Semnopithecus_entellus.k141_1672505                          200  3 -     12572 A-------------A-T
i Semnopithecus_entellus.k141_1672505                    C 0 I 1
s Semnopithecus_hypoleucos.k141_1615806                      27050  3 +     39453 A-------------A-T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 T 113
s Semnopithecus_johnii.k141_670120                            7568  3 +     27826 A-------------A-T
i Semnopithecus_johnii.k141_670120                       C 0 T 112
s Semnopithecus_priam.k141_638794                             7090  3 -     19483 a-------------a-t
i Semnopithecus_priam.k141_638794                        C 0 T 113
s Semnopithecus_schistaceus.k141_1572284                       391  3 -     12762 A-------------A-T
i Semnopithecus_schistaceus.k141_1572284                 C 0 T 107
s Semnopithecus_vetulus.k141_910252                            252  3 +     13763 A-------------A-T
i Semnopithecus_vetulus.k141_910252                      C 0 T 112
s Sigmodon_hispidus.SigHis_scaffold_42075                      415  3 -     30804 A-------------G-T
i Sigmodon_hispidus.SigHis_scaffold_42075                T 4 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               3882  3 +   1910179 G-------------A-A
i Solenodon_paradoxus.SolPar_flattened_line_126          I 1 C 0
s Sorex_araneus.JH798187.1                                13651149  3 -  18376816 A-------------A-C
i Sorex_araneus.JH798187.1                               I 93 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30861  3 +     97271 G-------------A-C
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 1 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              18451  3 -    196729 G-------------A-C
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 C 0
s Sus_scrofa.CM000828.4                                    6810934  3 +  69701581 g-------------a-c
i Sus_scrofa.CM000828.4                                  I 42 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                10929  2 +     41958 G-------------A--
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 1 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72746  3 +    116680 G-------------A-C
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 1 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118891  3 -    156842 G-------------A-A
i Tapirus_indicus.TapInd_scaffold_9301                   I 1 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387348  3 +    539355 G-------------A-A
i Tapirus_terrestris.TapTer_scaffold_755                 I 1 C 0
s Tarsius_lariang.k141_2201908                               26488  3 +     70052 a-------------a-g
i Tarsius_lariang.k141_2201908                           I 1 C 0
s Tarsius_wallacei.k141_254427                                1285  3 -     16117 a-------------a-g
i Tarsius_wallacei.k141_254427                           I 1 C 0
s Theropithecus_gelada.CM009954.1                        186428740  4 + 186847797 a-------------aat
i Theropithecus_gelada.CM009954.1                        C 0 T 115
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105560  3 +    114563 A-------------G-T
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 1 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   6530  3 +      8208 G-------------A-C
i Tolypeutes_matacus.TolMat_scaffold_228639              I 1 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81321  3 +    610378 G-------------A-C
i Tonatia_saurophila.TonSau_scaffold_294                 I 1 C 0
s Trachypithecus_auratus.k141_722599                         11141  3 -     20410 a-------------a-t
i Trachypithecus_auratus.k141_722599                     C 0 T 113
s Trachypithecus_crepusculus.k141_582567                       255  3 -     12674 a-------------a-t
i Trachypithecus_crepusculus.k141_582567                 C 0 T 113
s Trachypithecus_cristatus.k141_580354                       11242  3 +     19930 A-------------A-T
i Trachypithecus_cristatus.k141_580354                   C 0 T 113
s Trachypithecus_francoisi.k141_1412647                       7653  3 -     19997 a-------------a-t
i Trachypithecus_francoisi.k141_1412647                  C 0 T 113
s Trachypithecus_geei.k141_277701                            47792  3 -     60166 a-------------a-t
i Trachypithecus_geei.k141_277701                        C 0 T 113
s Trachypithecus_germaini.k141_912491                        15264  3 -     27529 a-------------a-t
i Trachypithecus_germaini.k141_912491                    C 0 T 113
s Trachypithecus_hatinhensis.k141_143409                     15208  3 -     18194 a-------------a-t
i Trachypithecus_hatinhensis.k141_143409                 C 0 T 113
s Trachypithecus_laotum.k141_907409                           8920  3 -     21137 a-------------a-t
i Trachypithecus_laotum.k141_907409                      C 0 T 113
s Trachypithecus_leucocephalus.k141_587342                    7623  3 -     10723 a-------------a-t
i Trachypithecus_leucocephalus.k141_587342               C 0 T 113
s Trachypithecus_melamera.k141_434728                         6795  3 +      9834 A-------------A-T
i Trachypithecus_melamera.k141_434728                    C 0 T 113
s Trachypithecus_obscurus.k141_190785                        25108  3 +     32220 A-------------A-T
i Trachypithecus_obscurus.k141_190785                    C 0 T 113
s Trachypithecus_phayrei.ctg124                            5939210  3 +   6242583 A-------------A-T
i Trachypithecus_phayrei.ctg124                          C 0 T 113
s Trachypithecus_pileatus.k141_2007326                        8461  3 +     20839 A-------------A-T
i Trachypithecus_pileatus.k141_2007326                   C 0 T 113
s Trichechus_manatus.JH594705.1                            4293362  3 +  10818551 g-------------a-t
i Trichechus_manatus.JH594705.1                          I 1 C 0
s Tupaia_chinensis.KB320699.1                              2155704  3 +   4065304 a-------------a-c
i Tupaia_chinensis.KB320699.1                            I 1 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9357  3 -     10553 A-------------A-C
i Tupaia_tana.TupTan_flattened_line_97126                I 1 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   53430  3 -     77625 C-------------A-C
i Uropsilus_gracilis.UroGra_scaffold_12083               I 1 C 0
s Ursus_maritimus.KK499267.1                               4850563  3 -   5085361 g-------------a-c
i Ursus_maritimus.KK499267.1                             I 1 C 0
s Varecia_rubra.k141_590885                                  11523  2 +     50397 --------------A-G
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11582  2 +     24756 --------------A-G
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5372015  3 -   5488506 g-------------a-c
i Vicugna_pacos.KN270157.1                               I 7 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10916  3 -     43706 G-------------A-C
i Vulpes_lagopus.VulLag_flattened_line_30954             I 1 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          5492  3 +     86975 g-------------a-c
i Zalophus_californianus.ZalCal_flattened_line_17732     I 1 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      15004  3 +     63895 A-------------A-T
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 1 C 0
e Alouatta_seniculus.k141_117119                             14962 21 +     50774 I
e Alouatta_discolor.k141_566626                              11280 196 +     28687 T
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Xerus_inauris.XerIna_scaffold_2302                          1179  7 +    224448 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spermophilus_dauricus.KZ294078.1                         1954051  7 -   3870691 I
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Marmota_marmota.CZRN01000018.1                          33103196  7 -  40650429 I
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Lepilemur_septentrionalis.k141_185316                      27069  0 +     54090 C
e Lepilemur_ruficaudatus.k141_121139                          1671  0 +     25010 C
e Lepilemur_dorsalis.k141_577674                             29133  0 +     45836 C
e Lepilemur_ankaranensis.k141_596936                         11072  0 -     23766 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Ictidomys_tridecemlineatus.JH393364.1                    7520996  7 -   7955117 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Elephantulus_edwardii.JH947257.1                         1097782  0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 50301  8 +     63868 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6944 1 +     62944 c
s Acinonyx_jubatus.LLWD01001279.1                           827431 1 -   1699592 a
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     70898 1 +     87051 T
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510705 1 -  29979442 a
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             79481 1 -    347723 a
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     74610 1 -     89534 T
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14768 1 -     52922 g
i Allenopithecus_nigroviridis.k141_3361533               T 106 I 106
s Allochrocebus_lhoesti.k141_4309873                         14684 1 -     28001 g
i Allochrocebus_lhoesti.k141_4309873                     T 105 I 105
s Allochrocebus_preussi.k141_1442296                          5180 1 -     18505 g
i Allochrocebus_preussi.k141_1442296                     T 107 I 107
s Allochrocebus_solatus.k141_166128                           6034 1 -     12518 g
i Allochrocebus_solatus.k141_166128                      T 105 I 105
s Alouatta_belzebul.k141_3560514                              7518 1 +     51355 a
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                 632 1 -     36483 a
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_juara.k141_1509701                                24905 1 +     25266 a
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_918386                             626 1 -      9457 a
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_3472759                            18212 1 -     18578 a
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              3599 1 +     47717 a
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                               304 1 +      5663 a
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185477 1 +    412891 G
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_griseimembra.k141_2240599                            15561 1 -     34016 a
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297954 1 -   5030052 a
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             15563 1 -     34685 a
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28687 1 -     47192 a
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      12729 1 +     20879 T
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       11582 1 +     14667 A
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4885 1 +     43469 A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  53812 1 -     92717 A
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54434 1 +     85213 A
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             5300 1 -     10423 a
i Callibella_humilis.k141_1278103                        T 277 I 277
s Callimico_goeldii.k141_1091182                             24767 1 +     31915 a
i Callimico_goeldii.k141_1091182                         T 279 I 279
s Callithrix_geoffroyi.k119_512088                            5262 1 +      5267 a
i Callithrix_geoffroyi.k119_512088                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590476 1 - 189096842 a
i Callithrix_jacchus.pat_scaffold_3                      T 255 I 255
s Callithrix_kuhlii.k119_1168854                               130 1 -     12329 C
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002518 1 -  17673402 a
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334976 1 -   7040546 a
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  403260 1 -   1652518 a
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17799296 1 -  60362399 A
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                       44 1 -     43241 A
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034739 1 -   9314153 a
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17959215 1 -  59632846 a
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18500516 1 +  63665305 a
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1176 1 -     12242 A
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 2
s Carlito_syrichta.NW_007259797.1                           156109 1 -    496798 a
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5234 1 -     11696 A
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137196 1 +    179628 T
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     93189 1 +    217609 A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                          9921 1 -     11392 a
i Cebuella_niveiventris.k141_1251222                     T 291 I 291
s Cebuella_pygmaea.k141_1309012                               6019 1 -      7577 a
i Cebuella_pygmaea.k141_1309012                          T 261 I 261
s Cebus_albifrons.Contig27                                25652604 1 +  26074798 a
i Cebus_albifrons.Contig27                               T 345 I 345
s Cebus_olivaceus.k141_398305                                 1695 1 +      1777 a
i Cebus_olivaceus.k141_398305                            I 10 I 6
s Cebus_unicolor.k141_544048                                 50034 1 -     74725 a
i Cebus_unicolor.k141_544048                             I 10 I 2
s Cephalopachus_bancanus.k141_1423433                         5490 1 +     31688 a
i Cephalopachus_bancanus.k141_1423433                    T 117 I 117
s Ceratotherium_simum.JH767749.1                          12231576 1 +  27778364 a
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2603 1 -     25243 A
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4475689 1 +   4669795 g
i Cercocebus_atys.KQ010504.1                             T 115 I 115
s Cercocebus_chrysogaster.k141_1540778                         193 1 +     17872 a
i Cercocebus_chrysogaster.k141_1540778                   T 115 I 115
s Cercocebus_lunulatus.k141_3342297                            850 1 -     14043 g
i Cercocebus_lunulatus.k141_3342297                      T 115 I 115
s Cercocebus_torquatus.k141_3057011                           8886 1 +     27781 g
i Cercocebus_torquatus.k141_3057011                      T 112 I 112
s Cercopithecus_ascanius.k141_1024104                         9055 1 -     20310 g
i Cercopithecus_ascanius.k141_1024104                    T 107 I 107
s Cercopithecus_cephus.k141_1078548                          12034 1 +     29689 g
i Cercopithecus_cephus.k141_1078548                      T 108 I 108
s Cercopithecus_diana.k141_1150327                            6788 1 -     20078 g
i Cercopithecus_diana.k141_1150327                       T 107 I 107
s Cercopithecus_hamlyni.k141_187466                          14711 1 -     27936 g
i Cercopithecus_hamlyni.k141_187466                      T 101 I 101
s Cercopithecus_lowei.k141_1854285                            3575 1 -     17152 g
i Cercopithecus_lowei.k141_1854285                       T 107 I 107
s Cercopithecus_albogularis.ctg5                                38817114 1 +  39242232 g
i Cercopithecus_albogularis.ctg5                               T 107 I 107
s Cercopithecus_mona.ctg39                                21222806 1 -  21565898 g
i Cercopithecus_mona.ctg39                               T 107 I 107
s Cercopithecus_neglectus.k141_2526306                       39924 1 -     53127 g
i Cercopithecus_neglectus.k141_2526306                   T 107 I 107
s Cercopithecus_nictitans.k141_1119862                         175 1 +     13442 g
i Cercopithecus_nictitans.k141_1119862                   T 107 I 107
s Cercopithecus_petaurista.k141_807961                       14724 1 -     27947 g
i Cercopithecus_petaurista.k141_807961                   T 107 I 107
s Cercopithecus_pogonias.k141_822820                         14700 1 +     17596 g
i Cercopithecus_pogonias.k141_822820                     T 107 I 107
s Cercopithecus_roloway.k141_2581234                           747 1 +     14005 g
i Cercopithecus_roloway.k141_2581234                     T 107 I 107
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             657 1 -      8501 C
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             21182 1 -     52598 G
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16547 1 +     57038 g
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1252924 1 +   2543920 T
i Chinchilla_lanigera.JH722012.1                         C 0 I 2
s Chiropotes_albinasus.k141_2206961                            259 1 -     15524 g
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18428684 1 -  18827391 g
i Chlorocebus_aethiops.ctg25                             T 107 I 107
s Chlorocebus_pygerythrus.k141_1025673                       15121 1 -     50209 g
i Chlorocebus_pygerythrus.k141_1025673                   T 107 I 107
s Chlorocebus_sabaeus.CM001947.1                         135422121 1 + 135778131 g
i Chlorocebus_sabaeus.CM001947.1                         T 107 I 107
s Choloepus_didactylus.ChoDid_scaffold_45914                 18437 1 +     19366 A
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            173514 1 +    839153 A
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1910630 1 +   2368649 g
i Colobus_angolensis.KN981557.1                          C 0 I 109
s Colobus_guereza.LG01                                   199948991 1 + 200372422 C
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37164 1 +     84244 g
i Colobus_polykomos.k141_906115                          C 0 I 109
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14535 1 -     20389 A
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetulus_griseus.LT883664.1                           11667665 1 + 224834208 A
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               3119 1 -     19598 A
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28618 1 -     87169 A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837196 1 +   1526836 T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35884 1 +     51376 A
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 2
s Dasypus_novemcinctus.JH564415.1                            63664 1 +   2246927 c
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537409 1 -  12879189 A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630251 1 +  20541912 a
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673427 1 +   1390856 a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6179 1 +    198055 A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36518 1 +     67921 A
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 2
s Eidolon_helvum.KE759718.1                                  10652 1 +     11740 a
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          20399 1 -    110024 A
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                             530 1 +      8657 A
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16329439 1 -  41312741 a
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2145854 1 -  14770903 a
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1283681 1 +   4378816 a
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18531501 1 -  39960074 a
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               33530 1 +    498745 a
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3328359 1 -   7059049 a
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21205291 1 -  21539334 g
i Erythrocebus_patas.Contig38                            T 105 I 105
s Eulemur_albifrons.k141_342033                              13894 1 -     14127 A
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6608 1 -     16928 A
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15640 1 -     25546 A
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12836 1 +     26330 A
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14071 1 +     23973 a
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12833 1 +     75513 A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10763 1 +     97555 a
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              254 1 +     13026 a
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4307 1 -     17153 A
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13880 1 +    111500 a
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237082 1 + 206538554 a
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195925 1 + 205367284 a
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  9669 1 -     36744 A
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             850552 1 +   3816255 a
i Fukomys_damarensis.KN121974.1                          C 0 I 2
s Galago_moholi.ctg2040                                     426725 1 -    453645 A
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4415 1 +     11339 A
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            1713 1 +     41679 A
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1310 1 -      9135 a
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            31477 1 +     49224 T
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              16085 1 -     32273 g
i Gorilla_beringei.k141_3596273                          T 114 I 114
s Gorilla_gorilla.LT578341.1                             186338223 1 + 186649187 g
i Gorilla_gorilla.LT578341.1                             T 113 I 113
s Graphiurus_murinus.GraMur_scaffold_10447                   32719 1 +     78134 T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6939 1 -     19426 A
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12088 1 -     15286 A
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13727 1 +     18253 A
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13828 1 -     41752 A
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13665 1 -     16460 A
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242451 1 +    327341 A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20662341 1 +  22651954 A
i Heterocephalus_glaber.JH602082.1                       C 0 I 2
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1011 1 +      7595 C
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hoolock_leuconedys.ctg274                                    434897 1 +    630532 g
i Hoolock_leuconedys.ctg274                                 T 101 I 101
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45145 1 +     55795 A
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83230 1 +    135385 A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 2
s Indri_indri.k141_3655594                                   22628 1 +     31101 A
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8276911 1 -   9596543 T
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    16499 1 -     42476 A
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15524180 1 -  30322482 A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7575 1 +     64341 a
i Leontocebus_fuscicollis.k141_1820339                   T 281 I 281
s Leontocebus_illigeri.k141_3350179                           4902 1 +      4941 a
i Leontocebus_illigeri.k141_3350179                      I 3 n 1
s Leontocebus_nigricollis.k141_4610752                        7620 1 +     35603 a
i Leontocebus_nigricollis.k141_4610752                   T 264 I 264
s Leontopithecus_chrysomelas.k141_1519602                    29052 1 +     38576 a
i Leontopithecus_chrysomelas.k141_1519602                T 248 I 248
s Leontopithecus_rosalia.k141_464620                         25749 1 +     66356 a
i Leontopithecus_rosalia.k141_464620                     T 251 I 251
s Lepilemur_ankaranensis.k141_596936                         11072 1 -     23766 A
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29133 1 +     45836 A
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1671 1 +     25010 A
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27069 1 +     54090 A
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3043178 1 +   3914936 a
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6600 1 -     14121 a
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437349 1 +   1826925 A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5974 1 +     11245 A
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004794 1 +   6120653 A
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4217444 1 -  43346337 c
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17955455 1 -  59628241 N
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               7054 1 +     40492 g
i Macaca_arctoides.k141_2326796                          C 0 I 106
s Macaca_assamensis.Contig5                               59676313 1 +  60120075 g
i Macaca_assamensis.Contig5                              C 0 I 106
s Macaca_cyclopis.k119_18836                                 12826 1 -     26193 g
i Macaca_cyclopis.k119_18836                             C 0 I 109
s Macaca_fascicularis.k141_814140                            80610 1 -    114318 g
i Macaca_fascicularis.k141_814140                        C 0 I 109
s Macaca_fuscata.k119_255327                                  6301 1 -     23192 g
i Macaca_fuscata.k119_255327                             C 0 I 105
s Macaca_leonina.k141_3550399                                15770 1 -     29190 g
i Macaca_leonina.k141_3550399                            C 0 I 109
s Macaca_maura.k141_2733130                                  24335 1 +     37952 g
i Macaca_maura.k141_2733130                              C 0 I 109
s Macaca_mulatta.NC_041758.1                             186839533 1 + 187317192 a
i Macaca_mulatta.NC_041758.1                             I 109 C 0
s Macaca_nemestrina.KQ007038.1                            25457987 1 -  25927173 g
i Macaca_nemestrina.KQ007038.1                           C 0 I 109
s Macaca_nigra.k141_1655396                                  80183 1 +     89720 g
i Macaca_nigra.k141_1655396                              C 0 I 109
s Macaca_radiata.k141_3680011                                 7184 1 +     20474 g
i Macaca_radiata.k141_3680011                            C 0 I 109
s Macaca_siberu.k141_635500                                   6984 1 -     14993 g
i Macaca_siberu.k141_635500                              C 0 I 109
s Macaca_silenus.Contig273                                  329850 1 -    668171 g
i Macaca_silenus.Contig273                               C 0 I 109
s Macaca_thibetana.k99_256239                                 5300 1 -     24072 g
i Macaca_thibetana.k99_256239                            C 0 I 106
s Macaca_tonkeana.k141_1498238                               25922 1 -     45290 g
i Macaca_tonkeana.k141_1498238                           C 0 I 109
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90745 1 +     94391 A
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23937509 1 -  24302211 g
i Mandrillus_leucophaeus.scaffold280                     T 115 I 115
s Mandrillus_sphinx.Contig270                               351633 1 +    752769 g
i Mandrillus_sphinx.Contig270                            T 115 I 115
s Manis_javanica.JSZB01003497.1                              18621 1 +    737560 a
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              50614 1 -    317179 a
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        10460 1 -    207569 A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10176 1 +     13704 A
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 32846 1 +    140813 T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12182340 1 -  29670104 A
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                5836 1 -      7380 a
i Mico_argentatus.k141_1239457                           T 255 I 255
s Mico_humeralifer.k141_2457295                                  1 1 +      1079 T
i Mico_humeralifer.k141_2457295                          T 319 I 319
s Mico_schneideri.k141_1950671                                      5848 1 -      7356 a
i Mico_schneideri.k141_1950671                                 T 255 I 255
s Microcebus_murinus.CM007674.1                           18291605 1 -  93316391 a
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                15778 1 -     19307 A
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11260578 1 -  27267610 A
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850740 1 +   8254450 a
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34421 1 +     64694 A
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9222 1 -     28506 g
i Miopithecus_ogouensis.k141_534055                      T 106 I 106
s Mirounga_angustirostris.MirAng_flattened_line_93702         6046 1 -      8324 A
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      9150 1 -     37649 A
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141750 1 -    366855 A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35551 1 +     37127 A
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           6950 1 +     14753 A
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84361460 1 - 120012414 t
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87650458 1 - 129401213 t
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31355117 1 -  89631738 T
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90752519 1 - 130317789 t
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              5058 1 +     14296 T
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               301589 1 -  14710649 a
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71363 1 -     80779 A
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 I 2
s Myotis_brandtii.KE162005.1                                280593 1 -  10118263 a
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1587858 1 -   6019432 a
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3903947 1 -   4330536 a
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                          96 1 +      1835 A
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189388 1 +    196477 A
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2034181 1 -   3037898 t
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               15217 1 +     21681 g
i Nasalis_larvatus.k141_413338                           C 0 I 113
s Neomonachus_schauinslandi.NINY01007730.1                20307632 1 +  31847680 a
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149523 1 -   9404916 a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102586338 1 - 196305487 A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              262 1 +      2075 a
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761692 1 + 199412804 A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1363664 1 +   3988456 a
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  746973 1 +  11899542 A
i Octodon_degus.JH651603.1                               C 0 I 2
s Odobenus_rosmarus.KB229312.1                              506777 1 -   2017862 a
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   25246 1 +     28053 G
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    80246 1 +    102263 A
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9964 1 -     18566 T
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147460 1 + 174332312 a
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462471 1 -    559221 a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4245 1 +      8798 A
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696408 1 -   1103335 a
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    44174 1 +     80009 g
i Pan_paniscus.KQ411613.1                                T 113 C 0
s Pan_troglodytes.CM009242.2                             189143189 1 + 189151597 C
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  151284 1 +    230217 A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                264493 1 +  18783137 a
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4721372 1 -   8748460 a
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183443311 1 + 183742232 g
i Papio_anubis.CM001495.2                                T 115 I 115
s Papio_cynocephalus.k141_4307930                             6957 1 +     20448 g
i Papio_cynocephalus.k141_4307930                        T 115 I 115
s Papio_hamadryas.Contig39                                20563769 1 +  20919399 g
i Papio_hamadryas.Contig39                               T 115 I 115
s Papio_kindae.k141_1936966                                   5701 1 +     41871 g
i Papio_kindae.k141_1936966                              T 115 I 115
s Papio_papio.k141_802527                                     8994 1 +     27711 g
i Papio_papio.k141_802527                                T 115 I 115
s Papio_ursinus.k141_3428135                                  9063 1 +      9205 g
i Papio_ursinus.k141_3428135                             T 115 I 115
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12781 1 -     78924 A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10226 1 +     13100 A
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8632 1 +     25941 A
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18194872 1 -  18517816 A
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28242 1 -     29689 A
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 I 2
s Piliocolobus_badius.k141_1234363                           43712 1 +     62158 a
i Piliocolobus_badius.k141_1234363                       C 0 I 109
s Piliocolobus_gordonorum.k141_381342                        38459 1 +     89929 a
i Piliocolobus_gordonorum.k141_381342                    C 0 I 109
s Piliocolobus_kirkii.k141_448987                            39875 1 +     51399 a
i Piliocolobus_kirkii.k141_448987                        C 0 I 109
s Piliocolobus_tephrosceles.PDMG02000141.1                14296113 1 -  14605196 a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 109
s Pongo_abelii.CM009266.2                                189131216 1 + 189387572 g
i Pongo_abelii.CM009266.2                                T 109 I 109
s Pongo_pygmaeus.ctg66                                     9570824 1 +   9816681 g
i Pongo_pygmaeus.ctg66                                   T 108 I 108
s Presbytis_comata.k141_677006                               73393 1 -     81375 g
i Presbytis_comata.k141_677006                           C 0 I 113
s Presbytis_mitrata.k141_1087752                              5213 1 +     19060 g
i Presbytis_mitrata.k141_1087752                         C 0 I 113
s Procavia_capensis.ProCapCap_scaffold_85530                 13466 1 -     22811 C
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2596860 1 -   4620579 a
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990846 1 +   2598838 a
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29158 1 +     38485 A
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1201 1 -     13098 A
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26679 1 +     35766 A
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4866 1 -     24134 A
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28691 1 -     67325 A
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4914 1 -      6182 A
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            10490 1 -     21651 T
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            15205 1 -     21811 a
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40366 1 +     42204 A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22976911 1 +  28871421 a
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                6964 1 -      8028 a
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20274438 1 -  38429054 a
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15226 1 -     91421 g
i Pygathrix_cinerea.k141_1153803                         C 0 I 113
s Pygathrix_nigripes_b.ctg100                                 7609346 1 +   7812017 g
i Pygathrix_nigripes_b.ctg100                               C 0 I 113
s Pygathrix_nigripes_a.k141_215492                             15198 1 -     72585 g
i Pygathrix_nigripes_a.k141_215492                         C 0 I 113
s Rattus_norvegicus.chr16                                 53570720 1 +  90668790 T
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             6911 1 -     11128 g
i Rhinopithecus_bieti.k119_217274                        C 0 I 111
s Rhinopithecus_roxellana.NC_044550.1                     91236371 1 - 195417433 c
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7671916 1 +   7961872 g
i Rhinopithecus_strykeri.ctg102                          C 0 I 111
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87933 1 -     96226 A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_8081                                   472 1 +     42994 C
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_57697                                257 1 +      1030 C
i Saguinus_imperator.k141_57697                          C 0 C 0
s Saguinus_inustus.k141_3945547                                336 1 -      8737 c
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_midas.LG03                                    209469823 1 + 209938924 C
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 8458 1 -      9399 c
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119950904 1 - 121099817 a
i Saimiri_boliviensis.NW_024100920.1                     T 292 I 292
s Saimiri_cassiquiarensis.k141_2188234                       23360 1 +     46362 a
i Saimiri_cassiquiarensis.k141_2188234                   T 175 I 175
s Saimiri_macrodon.k141_716185                               23455 1 +     45824 a
i Saimiri_macrodon.k141_716185                           T 175 I 175
s Saimiri_oerstedii.k141_1487881                             40083 1 -     64574 a
i Saimiri_oerstedii.k141_1487881                         T 226 I 226
s Saimiri_sciureus.k141_2278166                               3089 1 -     23631 a
i Saimiri_sciureus.k141_2278166                          T 292 I 292
s Saimiri_ustus.k141_1484609                                 23351 1 -     61129 a
i Saimiri_ustus.k141_1484609                             T 175 I 175
s Sapajus_apella.ctg103                                    5420790 1 -   5703754 a
i Sapajus_apella.ctg103                                  T 114 I 114
s Sapajus_macrocephalus.k141_351809                          55832 1 -     80660 a
i Sapajus_macrocephalus.k141_351809                      T 313 I 313
s Semnopithecus_entellus.k141_11662                          19735 1 -     19888 G
i Semnopithecus_entellus.k141_11662                      I 2 I 6
s Semnopithecus_hypoleucos.k141_1615806                      26940 1 +     39453 g
i Semnopithecus_hypoleucos.k141_1615806                  T 113 I 113
s Semnopithecus_johnii.k141_670120                            7459 1 +     27826 g
i Semnopithecus_johnii.k141_670120                       T 112 I 112
s Semnopithecus_priam.k141_638794                             6980 1 -     19483 g
i Semnopithecus_priam.k141_638794                        T 113 I 113
s Semnopithecus_schistaceus.k141_1572284                       287 1 -     12762 g
i Semnopithecus_schistaceus.k141_1572284                 T 107 I 107
s Semnopithecus_vetulus.k141_910252                            143 1 +     13763 g
i Semnopithecus_vetulus.k141_910252                      T 112 I 112
s Sigmodon_hispidus.SigHis_scaffold_42075                      418 1 -     30804 A
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               3885 1 +   1910179 A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13651152 1 -  18376816 A
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30864 1 +     97271 A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              18454 1 -    196729 A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6810937 1 +  69701581 a
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72749 1 +    116680 A
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118894 1 -    156842 A
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387351 1 +    539355 A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               26491 1 +     70052 a
i Tarsius_lariang.k141_2201908                           C 0 I 109
s Tarsius_wallacei.k141_254427                                1288 1 -     16117 a
i Tarsius_wallacei.k141_254427                           C 0 I 109
s Theropithecus_gelada.CM009954.1                        186428629 1 + 186847797 g
i Theropithecus_gelada.CM009954.1                        T 115 I 115
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105563 1 +    114563 G
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 2
s Tolypeutes_matacus.TolMat_scaffold_228639                   6533 1 +      8208 C
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81324 1 +    610378 A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         11031 1 -     20410 g
i Trachypithecus_auratus.k141_722599                     T 113 I 113
s Trachypithecus_crepusculus.k141_582567                       145 1 -     12674 g
i Trachypithecus_crepusculus.k141_582567                 T 113 I 113
s Trachypithecus_cristatus.k141_580354                       11132 1 +     19930 g
i Trachypithecus_cristatus.k141_580354                   T 113 I 113
s Trachypithecus_francoisi.k141_1412647                       7543 1 -     19997 g
i Trachypithecus_francoisi.k141_1412647                  T 113 I 113
s Trachypithecus_geei.k141_277701                            47682 1 -     60166 g
i Trachypithecus_geei.k141_277701                        T 113 I 113
s Trachypithecus_germaini.k141_912491                        15154 1 -     27529 g
i Trachypithecus_germaini.k141_912491                    T 113 I 113
s Trachypithecus_hatinhensis.k141_143409                     15098 1 -     18194 g
i Trachypithecus_hatinhensis.k141_143409                 T 113 I 113
s Trachypithecus_laotum.k141_907409                           8810 1 -     21137 g
i Trachypithecus_laotum.k141_907409                      T 113 I 113
s Trachypithecus_leucocephalus.k141_587342                    7513 1 -     10723 g
i Trachypithecus_leucocephalus.k141_587342               T 113 I 113
s Trachypithecus_melamera.k141_434728                         6685 1 +      9834 g
i Trachypithecus_melamera.k141_434728                    T 113 I 113
s Trachypithecus_obscurus.k141_190785                        24998 1 +     32220 g
i Trachypithecus_obscurus.k141_190785                    T 113 I 113
s Trachypithecus_phayrei.ctg124                            5939100 1 +   6242583 g
i Trachypithecus_phayrei.ctg124                          T 113 I 113
s Trachypithecus_pileatus.k141_2007326                        8351 1 +     20839 g
i Trachypithecus_pileatus.k141_2007326                   T 113 I 113
s Trichechus_manatus.JH594705.1                            4293365 1 +  10818551 c
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2155707 1 +   4065304 a
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9360 1 -     10553 A
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4850566 1 -   5085361 a
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  11525 1 +     50397 A
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11584 1 +     24756 A
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5372018 1 -   5488506 a
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10919 1 -     43706 A
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          5495 1 +     86975 a
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      15007 1 +     63895 T
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Echinops_telfairi.JH980293.1                            48780697 0 + 111700974 C
e Saguinus_labiatus.k141_285685                               8502 0 +      8564 C
e Aotus_azarae.k141_3104676                                  15535 0 -     33861 C
e Alouatta_seniculus.k141_117119                             14962 21 +     50774 I
e Alouatta_discolor.k141_566626                              11280 196 +     28687 T
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Xerus_inauris.XerIna_scaffold_2302                          1179 7 +    224448 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   53433 0 -     77625 C
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                10931 0 +     41958 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Spermophilus_dauricus.KZ294078.1                         1954051 7 -   3870691 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    153336 0 -    313613 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             1889 0 +     22620 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Microgale_talazaci.MicTal_scaffold_6613                    22446 0 -    145209 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Marmota_marmota.CZRN01000018.1                          33103196 7 -  40650429 I
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Ictidomys_tridecemlineatus.JH393364.1                    7520996 7 -   7955117 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Elephantulus_edwardii.JH947257.1                         1097782 0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 50301 8 +     63868 I
e Condylura_cristata.JH655891.1                           17548217 0 -  53390261 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6945 2 +     62944 c---g
s Acinonyx_jubatus.LLWD01001279.1                           827432 2 -   1699592 c---a
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     70899 2 +     87051 C---A
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510706 2 -  29979442 c---a
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             79482 2 -    347723 c---a
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     74611 2 -     89534 C---A
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14875 2 -     52922 c---a
i Allenopithecus_nigroviridis.k141_3361533               I 106 C 0
s Allochrocebus_lhoesti.k141_4309873                         14790 2 -     28001 c---a
i Allochrocebus_lhoesti.k141_4309873                     I 105 C 0
s Allochrocebus_preussi.k141_1442296                          5288 2 -     18505 c---a
i Allochrocebus_preussi.k141_1442296                     I 107 C 0
s Allochrocebus_solatus.k141_166128                           6140 2 -     12518 c---a
i Allochrocebus_solatus.k141_166128                      I 105 C 0
s Alouatta_belzebul.k141_3560514                              7519 2 +     51355 a---a
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                 633 5 -     36483 agaaa
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_juara.k141_1509701                                24906 2 +     25266 a---a
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_918386                             627 2 -      9457 a---a
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_3472759                            18213 2 -     18578 a---a
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              3600 2 +     47717 a---a
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                               305 2 +      5663 a---a
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185478 2 +    412891 G---A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_griseimembra.k141_2240599                            15562 2 -     34016 g---g
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297955 2 -   5030052 g---g
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             15564 2 -     34685 g---g
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28688 2 -     47192 g---g
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      12730 2 +     20879 C---A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       11583 2 +     14667 C---A
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4886 2 +     43469 G---A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  53813 2 -     92717 C---A
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54435 2 +     85213 C---A
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             5578 2 -     10423 c---a
i Callibella_humilis.k141_1278103                        I 277 C 0
s Callimico_goeldii.k141_1091182                             25047 2 +     31915 C---A
i Callimico_goeldii.k141_1091182                         I 279 C 0
s Callithrix_geoffroyi.k119_512088                            5263 2 +      5267 g---g
i Callithrix_geoffroyi.k119_512088                       C 0 N 0
s Callithrix_jacchus.pat_scaffold_3                       23590732 2 - 189096842 c---a
i Callithrix_jacchus.pat_scaffold_3                      I 255 C 0
s Callithrix_kuhlii.k119_1168854                               131 2 -     12329 C---A
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002519 2 -  17673402 c---a
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334977 2 -   7040546 c---a
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  403261 2 -   1652518 c---a
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17799297 2 -  60362399 T---G
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                       45 2 -     43241 T---G
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034740 2 -   9314153 t---g
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17959216 2 -  59632846 t---g
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18500517 2 +  63665305 t---g
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1179 2 -     12242 C---C
i Capromys_pilorides.CapPil_scaffold_65020               I 2 C 0
s Carlito_syrichta.NW_007259797.1                           156110 2 -    496798 c---a
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5235 2 -     11696 G---A
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137197 2 +    179628 C---A
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     93190 2 +    217609 C---A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                         10213 2 -     11392 c---a
i Cebuella_niveiventris.k141_1251222                     I 291 C 0
s Cebuella_pygmaea.k141_1309012                               6281 2 -      7577 c---a
i Cebuella_pygmaea.k141_1309012                          I 261 C 0
s Cebus_albifrons.Contig27                                25652950 2 +  26074798 c---a
i Cebus_albifrons.Contig27                               I 345 T 830
s Cebus_olivaceus.k141_1764483                                 888 2 +     28840 C---A
i Cebus_olivaceus.k141_1764483                           I 1 T 324
s Cebus_unicolor.k141_1837183                                  613 2 +     14051 C---A
i Cebus_unicolor.k141_1837183                            I 1 I 5
s Cephalopachus_bancanus.k141_1423433                         5608 2 +     31688 c---a
i Cephalopachus_bancanus.k141_1423433                    I 117 C 0
s Ceratotherium_simum.JH767749.1                          12231577 2 +  27778364 c---a
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2604 2 -     25243 C---A
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4475805 2 +   4669795 c---a
i Cercocebus_atys.KQ010504.1                             I 115 C 0
s Cercocebus_chrysogaster.k141_1540778                         309 2 +     17872 C---A
i Cercocebus_chrysogaster.k141_1540778                   I 115 C 0
s Cercocebus_lunulatus.k141_3342297                            966 2 -     14043 c---a
i Cercocebus_lunulatus.k141_3342297                      I 115 C 0
s Cercocebus_torquatus.k141_3057011                           8999 2 +     27781 C---A
i Cercocebus_torquatus.k141_3057011                      I 112 C 0
s Cercopithecus_ascanius.k141_1024104                         9163 2 -     20310 c---a
i Cercopithecus_ascanius.k141_1024104                    I 107 C 0
s Cercopithecus_cephus.k141_1078548                          12143 2 +     29689 C---A
i Cercopithecus_cephus.k141_1078548                      I 108 C 0
s Cercopithecus_diana.k141_1150327                            6896 2 -     20078 c---a
i Cercopithecus_diana.k141_1150327                       I 107 C 0
s Cercopithecus_hamlyni.k141_187466                          14813 2 -     27936 c---a
i Cercopithecus_hamlyni.k141_187466                      I 101 C 0
s Cercopithecus_lowei.k141_1854285                            3683 2 -     17152 c---a
i Cercopithecus_lowei.k141_1854285                       I 107 C 0
s Cercopithecus_albogularis.ctg5                                38817222 2 +  39242232 C---A
i Cercopithecus_albogularis.ctg5                               I 107 C 0
s Cercopithecus_mona.ctg39                                21222914 2 -  21565898 c---a
i Cercopithecus_mona.ctg39                               I 107 C 0
s Cercopithecus_neglectus.k141_2526306                       40032 2 -     53127 c---a
i Cercopithecus_neglectus.k141_2526306                   I 107 C 0
s Cercopithecus_nictitans.k141_1119862                         283 2 +     13442 C---A
i Cercopithecus_nictitans.k141_1119862                   I 107 C 0
s Cercopithecus_petaurista.k141_807961                       14832 2 -     27947 c---a
i Cercopithecus_petaurista.k141_807961                   I 107 C 0
s Cercopithecus_pogonias.k141_822820                         14808 2 +     17596 C---A
i Cercopithecus_pogonias.k141_822820                     I 107 C 0
s Cercopithecus_roloway.k141_2581234                           855 2 +     14005 C---A
i Cercopithecus_roloway.k141_2581234                     I 107 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             658 2 -      8501 C---A
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             21183 2 -     52598 C---A
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16548 2 +     57038 c---a
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1252927 2 +   2543920 C---A
i Chinchilla_lanigera.JH722012.1                         I 2 C 0
s Chiropotes_albinasus.k141_2206961                            260 2 -     15524 a---g
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18428792 2 -  18827391 c---a
i Chlorocebus_aethiops.ctg25                             I 107 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15229 2 -     50209 c---a
i Chlorocebus_pygerythrus.k141_1025673                   I 107 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422229 2 + 135778131 c---a
i Chlorocebus_sabaeus.CM001947.1                         I 107 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 18438 2 +     19366 C---A
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            173515 2 +    839153 C---A
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1910740 2 +   2368649 c---A
i Colobus_angolensis.KN981557.1                          I 109 C 0
s Colobus_guereza.LG01                                   199948992 2 + 200372422 C---A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37274 2 +     84244 C---A
i Colobus_polykomos.k141_906115                          I 109 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14536 2 -     20389 T---A
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetulus_griseus.LT883664.1                           11667666 2 + 224834208 C---A
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28619 2 -     87169 C---A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837197 2 +   1526836 C---C
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35887 2 +     51376 C---A
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 2 C 0
s Dasypus_novemcinctus.JH564415.1                            63665 2 +   2246927 c---a
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537410 2 -  12879189 C---A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630252 2 +  20541912 g---a
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673428 2 +   1390856 c---a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6180 2 +    198055 C---A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36521 2 +     67921 G---A
i Dinomys_branickii.DinBra_scaffold_21862                I 2 C 0
s Echinops_telfairi.JH980293.1                            48780697 2 + 111700974 c---a
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.KE759718.1                                  10653 2 +     11740 t---a
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          20400 2 -    110024 C---A
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                             531 2 +      8657 C---A
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16329440 2 -  41312741 c---a
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2145855 2 -  14770903 c---a
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1283682 2 +   4378816 c---a
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18531502 2 -  39960074 c---a
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               33531 2 +    498745 c---a
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21205397 2 -  21539334 c---a
i Erythrocebus_patas.Contig38                            I 105 C 0
s Eulemur_albifrons.k141_342033                              13895 2 -     14127 C---A
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6609 2 -     16928 C---A
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15641 2 -     25546 C---A
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12837 2 +     26330 C---A
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14072 2 +     23973 c---a
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12834 2 +     75513 C---A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10764 2 +     97555 c---a
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              255 2 +     13026 c---a
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4308 2 -     17153 C---A
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13881 2 +    111500 c---a
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237083 2 + 206538554 c---a
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195926 2 + 205367284 c---a
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  9670 2 -     36744 C---A
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             850555 2 +   3816255 c---a
i Fukomys_damarensis.KN121974.1                          I 2 C 0
s Galago_moholi.ctg2040                                     426726 2 -    453645 T---A
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4416 2 +     11339 T---A
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            1714 2 +     41679 T---A
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1311 2 -      9135 c---a
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            31478 2 +     49224 C---A
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              16200 2 -     32273 c---a
i Gorilla_beringei.k141_3596273                          I 114 C 0
s Gorilla_gorilla.LT578341.1                             186338337 2 + 186649187 C---A
i Gorilla_gorilla.LT578341.1                             I 113 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   32720 2 +     78134 C---A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6940 2 -     19426 C---A
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12089 2 -     15286 C---A
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13728 2 +     18253 C---A
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13829 2 -     41752 C---A
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13666 2 -     16460 C---A
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242452 2 +    327341 C---A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20662344 2 +  22651954 C---A
i Heterocephalus_glaber.JH602082.1                       I 2 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1012 2 +      7595 C---C
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hoolock_leuconedys.ctg274                                    434999 2 +    630532 C---A
i Hoolock_leuconedys.ctg274                                 I 101 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45146 2 +     55795 C---A
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83233 2 +    135385 C---A
i Hystrix_cristata.HysCri_scaffold_5660                  I 2 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7521003 1 -   7955117 ----a
i Ictidomys_tridecemlineatus.JH393364.1                  I 7 C 0
s Indri_indri.k141_3655594                                   22629 2 +     31101 C---A
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8276912 2 -   9596543 T---A
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    16500 2 -     42476 C---A
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15524181 2 -  30322482 C---A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7857 2 +     64341 C---A
i Leontocebus_fuscicollis.k141_1820339                   I 281 C 0
s Leontocebus_illigeri.k141_1304848                            197 2 -     35062 c---a
i Leontocebus_illigeri.k141_1304848                      I 1 C 0
s Leontocebus_nigricollis.k141_4610752                        7885 2 +     35603 C---A
i Leontocebus_nigricollis.k141_4610752                   I 264 C 0
s Leontopithecus_chrysomelas.k141_1519602                    29301 2 +     38576 C---A
i Leontopithecus_chrysomelas.k141_1519602                I 248 C 0
s Leontopithecus_rosalia.k141_464620                         26001 2 +     66356 C---A
i Leontopithecus_rosalia.k141_464620                     I 251 C 0
s Lepilemur_ankaranensis.k141_596936                         11073 2 -     23766 C---A
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29134 2 +     45836 C---A
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1672 2 +     25010 C---A
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27070 2 +     54090 C---A
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3043179 2 +   3914936 c---a
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6601 2 -     14121 t---a
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437350 2 +   1826925 C---A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5975 2 +     11245 C---A
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004795 2 +   6120653 C---A
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4217445 2 -  43346337 C---A
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17955456 2 -  59628241 N---N
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               7161 2 +     40492 C---A
i Macaca_arctoides.k141_2326796                          I 106 C 0
s Macaca_assamensis.Contig5                               59676420 2 +  60120075 C---A
i Macaca_assamensis.Contig5                              I 106 C 0
s Macaca_cyclopis.k119_18836                                 12936 2 -     26193 c---a
i Macaca_cyclopis.k119_18836                             I 109 C 0
s Macaca_fascicularis.k141_814140                            80720 2 -    114318 c---a
i Macaca_fascicularis.k141_814140                        I 109 C 0
s Macaca_fuscata.k119_255327                                  6407 2 -     23192 c---a
i Macaca_fuscata.k119_255327                             I 105 C 0
s Macaca_leonina.k141_3550399                                15880 2 -     29190 c---a
i Macaca_leonina.k141_3550399                            I 109 C 0
s Macaca_maura.k141_2733130                                  24445 2 +     37952 C---A
i Macaca_maura.k141_2733130                              I 109 C 0
s Macaca_mulatta.NC_041758.1                             186839534 2 + 187317192 c---a
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458097 2 -  25927173 c---A
i Macaca_nemestrina.KQ007038.1                           I 109 C 0
s Macaca_nigra.k141_1655396                                  80293 2 +     89720 C---A
i Macaca_nigra.k141_1655396                              I 109 C 0
s Macaca_radiata.k141_3680011                                 7294 2 +     20474 C---A
i Macaca_radiata.k141_3680011                            I 109 C 0
s Macaca_siberu.k141_635500                                   7094 2 -     14993 c---a
i Macaca_siberu.k141_635500                              I 109 C 0
s Macaca_silenus.Contig273                                  329960 2 -    668171 c---a
i Macaca_silenus.Contig273                               I 109 C 0
s Macaca_thibetana.k99_256239                                 5407 2 -     24072 c---a
i Macaca_thibetana.k99_256239                            I 106 C 0
s Macaca_tonkeana.k141_1498238                               26032 2 -     45290 c---a
i Macaca_tonkeana.k141_1498238                           I 109 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90746 2 +     94391 C---A
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23937625 2 -  24302211 c---a
i Mandrillus_leucophaeus.scaffold280                     I 115 C 0
s Mandrillus_sphinx.Contig270                               351749 2 +    752769 C---A
i Mandrillus_sphinx.Contig270                            I 115 C 0
s Manis_javanica.JSZB01003497.1                              18622 2 +    737560 c---c
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              50615 2 -    317179 c---c
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33103203 1 -  40650429 ----a
i Marmota_marmota.CZRN01000018.1                         I 7 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        10461 2 -    207569 C---A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10177 2 +     13704 C---A
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 32847 2 +    140813 C---A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12182341 2 -  29670104 C---A
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                6092 2 -      7380 c---a
i Mico_argentatus.k141_1239457                           I 255 C 0
s Mico_humeralifer.k141_2457295                                321 2 +      1079 C---A
i Mico_humeralifer.k141_2457295                          I 319 C 0
s Mico_schneideri.k141_1950671                                      6104 2 -      7356 c---a
i Mico_schneideri.k141_1950671                                 I 255 C 0
s Microcebus_murinus.CM007674.1                           18291606 2 -  93316391 c---a
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    22446 2 -    145209 C---A
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                15779 2 -     19307 G---A
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11260579 2 -  27267610 C---A
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850741 2 +   8254450 c---a
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34422 2 +     64694 C---A
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9329 2 -     28506 c---a
i Miopithecus_ogouensis.k141_534055                      I 106 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6047 2 -      8324 C---A
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      9151 2 -     37649 C---A
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141751 2 -    366855 C---A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35552 2 +     37127 C---A
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           6951 2 +     14753 C---A
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84361461 2 - 120012414 c---a
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87650459 2 - 129401213 c---a
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31355118 2 -  89631738 C---A
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90752520 2 - 130317789 c---a
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              5059 2 +     14296 C---A
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               301590 2 -  14710649 c---a
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71366 2 -     80779 C---C
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 2 C 0
s Myotis_brandtii.KE162005.1                                280594 2 -  10118263 c---a
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1587859 2 -   6019432 c---a
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3903948 2 -   4330536 c---a
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                          97 2 +      1835 C---A
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189389 2 +    196477 C---A
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2034182 2 -   3037898 c---a
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               15331 2 +     21681 C---A
i Nasalis_larvatus.k141_413338                           I 113 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20307633 2 +  31847680 c---a
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149524 2 -   9404916 c---a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102586339 2 - 196305487 C---A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              263 2 +      2075 c---a
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761693 2 + 199412804 C---A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1363665 2 +   3988456 t---a
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  746976 2 +  11899542 C---A
i Octodon_degus.JH651603.1                               I 2 C 0
s Odobenus_rosmarus.KB229312.1                              506778 2 -   2017862 c---a
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   25247 2 +     28053 C---A
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    80247 2 +    102263 C---A
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9965 2 -     18566 C---A
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147461 2 + 174332312 C---A
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462472 2 -    559221 c---a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4246 2 +      8798 T---A
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696409 2 -   1103335 t---a
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    44175 2 +     80009 a---a
i Pan_paniscus.KQ411613.1                                C 0 I 113
s Pan_troglodytes.CM009242.2                             189143190 2 + 189151597 C---A
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  151285 2 +    230217 C---A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                264494 2 +  18783137 c---a
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4721373 2 -   8748460 c---a
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183443427 2 + 183742232 c---a
i Papio_anubis.CM001495.2                                I 115 C 0
s Papio_cynocephalus.k141_4307930                             7073 2 +     20448 C---A
i Papio_cynocephalus.k141_4307930                        I 115 C 0
s Papio_hamadryas.Contig39                                20563885 2 +  20919399 C---A
i Papio_hamadryas.Contig39                               I 115 C 0
s Papio_kindae.k141_1936966                                   5817 2 +     41871 C---A
i Papio_kindae.k141_1936966                              I 115 C 0
s Papio_papio.k141_802527                                     9110 2 +     27711 C---A
i Papio_papio.k141_802527                                I 115 C 0
s Papio_ursinus.k141_3428135                                  9179 2 +      9205 C---A
i Papio_ursinus.k141_3428135                             I 115 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12782 2 -     78924 C---A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10227 2 +     13100 C---A
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8633 2 +     25941 C---A
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18194873 2 -  18517816 C---A
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28245 2 -     29689 C---T
i Petromus_typicus.PetTyp_scaffold_42190                 I 2 C 0
s Piliocolobus_badius.k141_1234363                           43822 2 +     62158 c---a
i Piliocolobus_badius.k141_1234363                       I 109 C 0
s Piliocolobus_gordonorum.k141_381342                        38569 2 +     89929 C---A
i Piliocolobus_gordonorum.k141_381342                    I 109 C 0
s Piliocolobus_kirkii.k141_448987                            39985 2 +     51399 C---A
i Piliocolobus_kirkii.k141_448987                        I 109 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296223 2 -  14605196 C---A
i Piliocolobus_tephrosceles.PDMG02000141.1               I 109 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1889 2 +     22620 C---A
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189131326 2 + 189387572 c---A
i Pongo_abelii.CM009266.2                                I 109 C 0
s Pongo_pygmaeus.ctg66                                     9570933 2 +   9816681 C---A
i Pongo_pygmaeus.ctg66                                   I 108 C 0
s Presbytis_comata.k141_677006                               73507 2 -     81375 c---a
i Presbytis_comata.k141_677006                           I 113 C 0
s Presbytis_mitrata.k141_1087752                              5327 2 +     19060 C---A
i Presbytis_mitrata.k141_1087752                         I 113 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 13467 2 -     22811 C---C
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2596861 2 -   4620579 c---g
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990847 2 +   2598838 c---a
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29159 2 +     38485 C---A
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1202 2 -     13098 C---A
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26680 2 +     35766 C---A
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4867 2 -     24134 C---A
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28692 2 -     67325 C---A
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4915 2 -      6182 C---A
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            10491 2 -     21651 C---A
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            15206 2 -     21811 a---g
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40367 2 +     42204 C---A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22976912 2 +  28871421 c---a
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                6965 2 -      8028 c---a
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20274439 2 -  38429054 c---a
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15340 2 -     91421 c---a
i Pygathrix_cinerea.k141_1153803                         I 113 C 0
s Pygathrix_nigripes_b.ctg100                                 7609460 2 +   7812017 C---A
i Pygathrix_nigripes_b.ctg100                               I 113 C 0
s Pygathrix_nigripes_a.k141_215492                             15312 2 -     72585 c---a
i Pygathrix_nigripes_a.k141_215492                         I 113 C 0
s Rattus_norvegicus.chr16                                 53570721 2 +  90668790 C---A
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             7023 2 -     11128 c---a
i Rhinopithecus_bieti.k119_217274                        I 111 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236372 2 - 195417433 C---A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672028 2 +   7961872 C---A
i Rhinopithecus_strykeri.ctg102                          I 111 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87934 2 -     96226 C---G
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_8081                                   473 2 +     42994 C---A
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_57697                                258 2 +      1030 C---A
i Saguinus_imperator.k141_57697                          C 0 C 0
s Saguinus_inustus.k141_3945547                                337 2 -      8737 c---a
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_midas.LG03                                    209469824 2 + 209938924 C---A
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 8459 2 -      9399 c---a
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951197 2 - 121099817 C---A
i Saimiri_boliviensis.NW_024100920.1                     I 292 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23536 2 +     46362 C---A
i Saimiri_cassiquiarensis.k141_2188234                   I 175 C 0
s Saimiri_macrodon.k141_716185                               23631 2 +     45824 C---A
i Saimiri_macrodon.k141_716185                           I 175 C 0
s Saimiri_oerstedii.k141_1487881                             40310 2 -     64574 c---a
i Saimiri_oerstedii.k141_1487881                         I 226 C 0
s Saimiri_sciureus.k141_2278166                               3382 2 -     23631 c---a
i Saimiri_sciureus.k141_2278166                          I 292 C 0
s Saimiri_ustus.k141_1484609                                 23527 2 -     61129 c---a
i Saimiri_ustus.k141_1484609                             I 175 C 0
s Sapajus_apella.ctg103                                    5420905 2 -   5703754 c---a
i Sapajus_apella.ctg103                                  I 114 C 0
s Sapajus_macrocephalus.k141_351809                          56146 2 -     80660 c---a
i Sapajus_macrocephalus.k141_351809                      I 313 T 313
s Semnopithecus_entellus.k141_1672505                          204 2 -     12572 C---A
i Semnopithecus_entellus.k141_1672505                    I 1 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27054 2 +     39453 C---A
i Semnopithecus_hypoleucos.k141_1615806                  I 113 C 0
s Semnopithecus_johnii.k141_670120                            7572 2 +     27826 C---A
i Semnopithecus_johnii.k141_670120                       I 112 C 0
s Semnopithecus_priam.k141_638794                             7094 2 -     19483 c---a
i Semnopithecus_priam.k141_638794                        I 113 C 0
s Semnopithecus_schistaceus.k141_1572284                       395 2 -     12762 C---A
i Semnopithecus_schistaceus.k141_1572284                 I 107 C 0
s Semnopithecus_vetulus.k141_910252                            256 2 +     13763 C---A
i Semnopithecus_vetulus.k141_910252                      I 112 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                      419 2 -     30804 C---A
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 I 5
s Solenodon_paradoxus.SolPar_flattened_line_126               3886 2 +   1910179 A---A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1954058 1 -   3870691 ----a
i Spermophilus_dauricus.KZ294078.1                       I 7 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30865 2 +     97271 C---A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              18455 2 -    196729 C---A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6810938 2 +  69701581 c---a
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                10931 2 +     41958 C---A
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72750 2 +    116680 C---G
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118895 2 -    156842 C---A
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387352 2 +    539355 C---A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               26601 2 +     70052 C---A
i Tarsius_lariang.k141_2201908                           I 109 C 0
s Tarsius_wallacei.k141_254427                                1398 2 -     16117 c---a
i Tarsius_wallacei.k141_254427                           I 109 C 0
s Theropithecus_gelada.CM009954.1                        186428745 2 + 186847797 c---a
i Theropithecus_gelada.CM009954.1                        I 115 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105566 2 +    114563 C---T
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 2 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   6534 2 +      8208 C---A
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81325 2 +    610378 G---A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         11145 2 -     20410 c---a
i Trachypithecus_auratus.k141_722599                     I 113 C 0
s Trachypithecus_crepusculus.k141_582567                       259 2 -     12674 c---a
i Trachypithecus_crepusculus.k141_582567                 I 113 C 0
s Trachypithecus_cristatus.k141_580354                       11246 2 +     19930 C---A
i Trachypithecus_cristatus.k141_580354                   I 113 C 0
s Trachypithecus_francoisi.k141_1412647                       7657 2 -     19997 c---a
i Trachypithecus_francoisi.k141_1412647                  I 113 C 0
s Trachypithecus_geei.k141_277701                            47796 2 -     60166 c---a
i Trachypithecus_geei.k141_277701                        I 113 C 0
s Trachypithecus_germaini.k141_912491                        15268 2 -     27529 c---a
i Trachypithecus_germaini.k141_912491                    I 113 C 0
s Trachypithecus_hatinhensis.k141_143409                     15212 2 -     18194 c---a
i Trachypithecus_hatinhensis.k141_143409                 I 113 C 0
s Trachypithecus_laotum.k141_907409                           8924 2 -     21137 c---a
i Trachypithecus_laotum.k141_907409                      I 113 C 0
s Trachypithecus_leucocephalus.k141_587342                    7627 2 -     10723 c---a
i Trachypithecus_leucocephalus.k141_587342               I 113 C 0
s Trachypithecus_melamera.k141_434728                         6799 2 +      9834 C---A
i Trachypithecus_melamera.k141_434728                    I 113 C 0
s Trachypithecus_obscurus.k141_190785                        25112 2 +     32220 C---A
i Trachypithecus_obscurus.k141_190785                    I 113 C 0
s Trachypithecus_phayrei.ctg124                            5939214 2 +   6242583 C---A
i Trachypithecus_phayrei.ctg124                          I 113 C 0
s Trachypithecus_pileatus.k141_2007326                        8465 2 +     20839 C---A
i Trachypithecus_pileatus.k141_2007326                   I 113 C 0
s Trichechus_manatus.JH594705.1                            4293366 2 +  10818551 c---a
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2155708 2 +   4065304 C---A
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9361 2 -     10553 C---G
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Ursus_maritimus.KK499267.1                               4850567 2 -   5085361 c---a
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  11526 2 +     50397 C---A
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11585 2 +     24756 C---A
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5372019 2 -   5488506 c---a
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10920 2 -     43706 C---A
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          1186 1 +    224448 ----a
i Xerus_inauris.XerIna_scaffold_2302                     I 7 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          5496 2 +     86975 c---a
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      15008 2 +     63895 C---A
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Saguinus_labiatus.k141_285685                               8502 0 +      8564 C
e Aotus_azarae.k141_3104676                                  15535 0 -     33861 C
e Alouatta_seniculus.k141_117119                             14962 21 +     50774 I
e Alouatta_discolor.k141_566626                              11280 196 +     28687 T
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   53433 0 -     77625 C
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sorex_araneus.JH798187.1                                13651153 0 -  18376816 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    153336 0 -    313613 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3328360 0 -   7059049 C
e Elephantulus_edwardii.JH947257.1                         1097782 0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Crocidura_indochinensis.CroInd_scaffold_37019               3120 0 -     19598 C
e Cricetomys_gambianus.CriGam_scaffold_18520                 50301 8 +     63868 I
e Condylura_cristata.JH655891.1                           17548217 0 -  53390261 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6947  4 +     62944 g--------t-a--a
s Acinonyx_jubatus.LLWD01001279.1                           827434  4 -   1699592 g--------a-a--a
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     70901  4 +     87051 G--------T-A--A
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510708  4 -  29979442 a--------a-a--a
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             79484  4 -    347723 g--------a-a--a
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     74613  4 -     89534 G--------C-A--A
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14877  4 -     52922 g--------c-a--a
i Allenopithecus_nigroviridis.k141_3361533               C 0 T 106
s Allochrocebus_lhoesti.k141_4309873                         14792  4 -     28001 g--------c-a--a
i Allochrocebus_lhoesti.k141_4309873                     C 0 T 105
s Allochrocebus_preussi.k141_1442296                          5290  4 -     18505 g--------c-a--a
i Allochrocebus_preussi.k141_1442296                     C 0 T 107
s Allochrocebus_solatus.k141_166128                           6142  4 -     12518 g--------c-a--a
i Allochrocebus_solatus.k141_166128                      C 0 T 105
s Alouatta_belzebul.k141_3560514                              7521  4 +     51355 a--------a-a--g
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                 638  4 -     36483 g--------a-a--a
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              11084  1 +     28687 --------------g
i Alouatta_discolor.k141_566626                          T 196 C 0
s Alouatta_juara.k141_1509701                                24908  4 +     25266 g--------a-a--a
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_918386                             629  4 -      9457 g--------a-a--a
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_3472759                            18215  4 -     18578 g--------a-a--a
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              3602  4 +     47717 a--------a-a--g
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                               307  4 +      5663 g--------a-a--a
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185480  4 +    412891 G--------T-A--A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  15535  1 -     33861 --------------g
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            15564  4 -     34016 g--------a-g--g
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4297957  4 -   5030052 g--------a-g--g
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             15566  4 -     34685 g--------a-g--g
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28690  4 -     47192 g--------a-g--g
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      12732  4 +     20879 A--------C-A--A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       11585  4 +     14667 G--------C-A--A
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4888  4 +     43469 G--------C-A--G
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  53815  4 -     92717 G--------T-G--A
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54437  4 +     85213 G--------T-G--A
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             5580  4 -     10423 g--------c-c--a
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             25049  4 +     31915 G--------C-C--A
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590734  4 - 189096842 g--------c-c--a
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                               133  4 -     12329 G--------C-C--A
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002521  4 -  17673402 G--------T-A--A
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334979  4 -   7040546 G--------T-A--A
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  403263  4 -   1652518 g--------t-a--a
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17799299  4 -  60362399 G--------G-A--A
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                       47  4 -     43241 G--------G-A--A
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034742  4 -   9314153 g--------G-A--A
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17959218  4 -  59632846 g--------G-A--A
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18500519  4 +  63665305 g--------G-A--A
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1181  4 -     12242 A--------T-A--A
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           156112  4 -    496798 g--------c-a--a
i Carlito_syrichta.NW_007259797.1                        C 0 I 1
s Carollia_perspicillata.CarPer_scaffold_92756                5237  4 -     11696 G--------T-A--A
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137199  4 +    179628 A--------C-A--A
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     93192  4 +    217609 G--------T-A--A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                         10215  4 -     11392 g--------c-c--a
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               6283  4 -      7577 g--------c-c--a
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25652122  4 +  26074798 g--------a-a--a
i Cebus_albifrons.Contig27                               T 830 I 485
s Cebus_olivaceus.k141_1764483                                 566  4 +     28840 g--------a-a--a
i Cebus_olivaceus.k141_1764483                           T 324 I 325
s Cebus_unicolor.k141_544048                                 50037  4 -     74725 g--------a-a--a
i Cebus_unicolor.k141_544048                             I 2 C 0
s Cephalopachus_bancanus.k141_1423433                         5610  4 +     31688 g--------c-a--a
i Cephalopachus_bancanus.k141_1423433                    C 0 T 117
s Ceratotherium_simum.JH767749.1                          12231579  4 +  27778364 g--------c-a--a
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2606  4 -     25243 G--------C-A--A
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4475807  4 +   4669795 g--------c-a--a
i Cercocebus_atys.KQ010504.1                             C 0 T 115
s Cercocebus_chrysogaster.k141_1540778                         311  4 +     17872 G--------C-A--A
i Cercocebus_chrysogaster.k141_1540778                   C 0 I 1
s Cercocebus_lunulatus.k141_3342297                            968  4 -     14043 g--------c-a--a
i Cercocebus_lunulatus.k141_3342297                      C 0 T 115
s Cercocebus_torquatus.k141_3057011                           9001  4 +     27781 G--------C-A--A
i Cercocebus_torquatus.k141_3057011                      C 0 T 112
s Cercopithecus_ascanius.k141_1024104                         9165  4 -     20310 g--------c-a--a
i Cercopithecus_ascanius.k141_1024104                    C 0 T 107
s Cercopithecus_cephus.k141_1078548                          12145  4 +     29689 G--------C-A--A
i Cercopithecus_cephus.k141_1078548                      C 0 T 108
s Cercopithecus_diana.k141_1150327                            6898  4 -     20078 g--------c-a--a
i Cercopithecus_diana.k141_1150327                       C 0 T 107
s Cercopithecus_hamlyni.k141_187466                          14815  4 -     27936 g--------c-a--a
i Cercopithecus_hamlyni.k141_187466                      C 0 T 101
s Cercopithecus_lowei.k141_1854285                            3685  4 -     17152 g--------c-a--a
i Cercopithecus_lowei.k141_1854285                       C 0 T 107
s Cercopithecus_albogularis.ctg5                                38817224  4 +  39242232 G--------C-A--A
i Cercopithecus_albogularis.ctg5                               C 0 T 107
s Cercopithecus_mona.ctg39                                21222916  4 -  21565898 g--------c-a--a
i Cercopithecus_mona.ctg39                               C 0 T 107
s Cercopithecus_neglectus.k141_2526306                       40034  4 -     53127 g--------c-a--a
i Cercopithecus_neglectus.k141_2526306                   C 0 T 107
s Cercopithecus_nictitans.k141_1119862                         285  4 +     13442 G--------C-A--A
i Cercopithecus_nictitans.k141_1119862                   C 0 T 107
s Cercopithecus_petaurista.k141_807961                       14834  4 -     27947 g--------c-a--a
i Cercopithecus_petaurista.k141_807961                   C 0 T 107
s Cercopithecus_pogonias.k141_822820                         14810  4 +     17596 G--------C-A--A
i Cercopithecus_pogonias.k141_822820                     C 0 T 107
s Cercopithecus_roloway.k141_2581234                           857  4 +     14005 G--------C-A--A
i Cercopithecus_roloway.k141_2581234                     C 0 T 107
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             660  4 -      8501 G--------T-G--A
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             21185  4 -     52598 G--------T-G--A
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16550  4 +     57038 g--------t-g--a
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1252929  4 +   2543920 T--------C-A--G
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2206961                            262  4 -     15524 g--------g-a--g
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18428794  4 -  18827391 g--------c-a--a
i Chlorocebus_aethiops.ctg25                             C 0 T 107
s Chlorocebus_pygerythrus.k141_1025673                       15231  4 -     50209 g--------c-a--a
i Chlorocebus_pygerythrus.k141_1025673                   C 0 T 107
s Chlorocebus_sabaeus.CM001947.1                         135422231  4 + 135778131 g--------C-A--A
i Chlorocebus_sabaeus.CM001947.1                         C 0 T 107
s Choloepus_didactylus.ChoDid_scaffold_45914                 18440  4 +     19366 G--------T-A--A
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            173517  4 +    839153 G--------T-A--A
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1910742  4 +   2368649 G--------C-A--A
i Colobus_angolensis.KN981557.1                          C 0 T 109
s Colobus_guereza.LG01                                   199948994  4 + 200372422 G--------C-A--A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37276  4 +     84244 G--------C-A--A
i Colobus_polykomos.k141_906115                          C 0 T 109
s Condylura_cristata.JH655891.1                           17548217  4 -  53390261 a--------C-A--A
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14538  4 -     20389 G--------T-A--A
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 50309  4 +     63868 A--------T-A--A
i Cricetomys_gambianus.CriGam_scaffold_18520             I 8 C 0
s Cricetulus_griseus.LT883664.1                           11667668  4 + 224834208 G--------T-A--A
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               3120  4 -     19598 G--------C-A--A
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28621  4 -     87169 G--------A-A--A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837199  4 +   1526836 A--------C-A--G
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35889  4 +     51376 A--------C-A--A
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            63667  4 +   2246927 g--------t-A--A
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537412  4 -  12879189 G--------C-A--A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630254  4 +  20541912 g--------t-a--a
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673430  4 +   1390856 g--------c-a--a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6182  4 +    198055 G--------C-A--A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36523  4 +     67921 A--------C-C--A
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Echinops_telfairi.JH980293.1                            48780699  4 + 111700974 T--------G-A--A
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.KE759718.1                                  10655  4 +     11740 a--------t-a--a
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          20402  4 -    110024 G--------T-A--A
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                             533  4 +      8657 G--------T-A--A
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16329442  4 -  41312741 g--------a-a--a
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2145857  4 -  14770903 a--------t-a--a
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1283684  4 +   4378816 g--------c-a--a
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18531504  4 -  39960074 g--------c-a--a
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               33533  4 +    498745 g--------c-a--a
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3328360  4 -   7059049 a--------c-a--A
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21205399  4 -  21539334 g--------c-a--a
i Erythrocebus_patas.Contig38                            C 0 T 105
s Eulemur_albifrons.k141_342033                              13897  4 -     14127 G--------C-A--A
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6611  4 -     16928 G--------C-G--A
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15643  4 -     25546 G--------T-G--A
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12839  4 +     26330 G--------T-G--A
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14074  4 +     23973 g--------c-a--a
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12836  4 +     75513 G--------T-G--A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10766  4 +     97555 g--------c-g--a
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              257  4 +     13026 g--------c-g--a
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4310  4 -     17153 G--------C-G--A
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13883  4 +    111500 g--------c-a--a
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237085  4 + 206538554 g--------a-a--a
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195928  4 + 205367284 g--------a-a--a
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  9672  4 -     36744 G--------A-A--A
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             850557  4 +   3816255 a--------c-a--a
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg2040                                     426728  4 -    453645 G--------C-A--A
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4418  4 +     11339 G--------C-A--A
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            1716  4 +     41679 G--------C-A--A
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1313  4 -      9135 g--------c-a--a
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            31480  4 +     49224 A--------C-A--G
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              16202  4 -     32273 g--------t-a--a
i Gorilla_beringei.k141_3596273                          C 0 T 114
s Gorilla_gorilla.LT578341.1                             186338339  4 + 186649187 G--------T-A--A
i Gorilla_gorilla.LT578341.1                             C 0 T 113
s Graphiurus_murinus.GraMur_scaffold_10447                   32722  4 +     78134 A--------C-C--A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6942  4 -     19426 G--------T-G--A
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12091  4 -     15286 G--------T-G--A
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13730  4 +     18253 G--------T-G--A
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13831  4 -     41752 G--------T-G--A
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13668  4 -     16460 G--------T-G--A
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242454  4 +    327341 G--------A-A--A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20662346  4 +  22651954 A--------C-A--G
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1014  4 +      7595 A--------A-A--A
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hoolock_leuconedys.ctg274                                    435001  4 +    630532 G--------T-A--A
i Hoolock_leuconedys.ctg274                                 C 0 T 101
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45148  4 +     55795 G--------A-A--A
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83235  4 +    135385 A--------C-A--T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7521004  4 -   7955117 a--------c-a--a
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   22631  4 +     31101 G--------T-G--A
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8276914  4 -   9596543 G--------C-A--A
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    16502  4 -     42476 G--------T-A--A
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15524183  4 -  30322482 G--------T-G--A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7859  4 +     64341 G--------C-C--A
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                            199  4 -     35062 g--------c-c--a
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        7887  4 +     35603 G--------C-C--A
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    29303  4 +     38576 G--------C-C--A
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         26003  4 +     66356 G--------C-C--A
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         11075  4 -     23766 G--------T-G--A
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29136  4 +     45836 G--------T-G--A
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1674  4 +     25010 G--------T-G--A
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27072  4 +     54090 G--------T-G--A
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3043181  4 +   3914936 g--------a-a--a
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6603  4 -     14121 g--------c-a--a
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437352  4 +   1826925 G--------C-A--A
i Lophocebus_aterrimus.ctg367                            C 0 T 117
s Loris_lydekkerianus.k141_2539221                            5977  4 +     11245 G--------C-A--A
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004797  4 +   6120653 G--------C-A--A
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4217447  4 -  43346337 G--------G-A--C
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17955458  4 -  59628241 N--------N-N--N
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               7163  4 +     40492 G--------C-A--A
i Macaca_arctoides.k141_2326796                          C 0 T 106
s Macaca_assamensis.Contig5                               59676422  4 +  60120075 G--------C-A--A
i Macaca_assamensis.Contig5                              C 0 T 106
s Macaca_cyclopis.k119_18836                                 12938  4 -     26193 g--------c-a--a
i Macaca_cyclopis.k119_18836                             C 0 T 109
s Macaca_fascicularis.k141_814140                            80722  4 -    114318 g--------c-a--a
i Macaca_fascicularis.k141_814140                        C 0 T 109
s Macaca_fuscata.k119_255327                                  6409  4 -     23192 g--------c-a--a
i Macaca_fuscata.k119_255327                             C 0 T 105
s Macaca_leonina.k141_3550399                                15882  4 -     29190 g--------c-a--a
i Macaca_leonina.k141_3550399                            C 0 T 109
s Macaca_maura.k141_2733130                                  24447  4 +     37952 G--------C-A--A
i Macaca_maura.k141_2733130                              C 0 T 109
s Macaca_mulatta.NC_041758.1                             186839536  4 + 187317192 g--------c-a--a
i Macaca_mulatta.NC_041758.1                             C 0 T 109
s Macaca_nemestrina.KQ007038.1                            25458099  4 -  25927173 G--------C-A--A
i Macaca_nemestrina.KQ007038.1                           C 0 T 109
s Macaca_nigra.k141_1655396                                  80295  4 +     89720 G--------C-A--A
i Macaca_nigra.k141_1655396                              C 0 T 109
s Macaca_radiata.k141_3680011                                 7296  4 +     20474 G--------C-A--A
i Macaca_radiata.k141_3680011                            C 0 T 109
s Macaca_siberu.k141_635500                                   7096  4 -     14993 g--------c-a--a
i Macaca_siberu.k141_635500                              C 0 T 109
s Macaca_silenus.Contig273                                  329962  4 -    668171 g--------c-a--a
i Macaca_silenus.Contig273                               C 0 T 109
s Macaca_thibetana.k99_256239                                 5409  4 -     24072 g--------c-a--a
i Macaca_thibetana.k99_256239                            C 0 T 106
s Macaca_tonkeana.k141_1498238                               26034  4 -     45290 g--------c-a--a
i Macaca_tonkeana.k141_1498238                           C 0 T 109
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90748  4 +     94391 G--------T-A--A
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23937627  4 -  24302211 g--------c-a--a
i Mandrillus_leucophaeus.scaffold280                     C 0 T 115
s Mandrillus_sphinx.Contig270                               351751  4 +    752769 G--------C-A--A
i Mandrillus_sphinx.Contig270                            C 0 T 115
s Manis_javanica.JSZB01003497.1                              18624 12 +    737560 gaagaaaaca-a--a
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              50617 12 -    317179 gaagaaaaca-a--a
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33103204  4 -  40650429 a--------c-a--a
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        10463  4 -    207569 G--------T-A--A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10179  4 +     13704 G--------A-A--A
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 32849  4 +    140813 G--------G-T--A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12182343  4 -  29670104 G--------T-A--A
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                6094  4 -      7380 g--------c-c--a
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_2457295                                323  4 +      1079 G--------C-C--A
i Mico_humeralifer.k141_2457295                          C 0 C 0
s Mico_schneideri.k141_1950671                                      6106  4 -      7356 g--------c-c--a
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18291608  4 -  93316391 g--------t-G--A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    22448  4 -    145209 T--------A-A--A
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                15781  4 -     19307 G--------T-A--A
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11260581  4 -  27267610 G--------T-A--A
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850743  4 +   8254450 g--------t-a--a
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34424  4 +     64694 G--------T-A--A
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9331  4 -     28506 g--------c-a--a
i Miopithecus_ogouensis.k141_534055                      C 0 T 106
s Mirounga_angustirostris.MirAng_flattened_line_93702         6049  4 -      8324 G--------A-A--A
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      9153  4 -     37649 G--------T-G--A
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141753  4 -    366855 G--------T-A--A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35554  4 +     37127 G--------A-A--A
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           6953  4 +     14753 G--------T-A--A
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84361463  4 - 120012414 g--------a-g--a
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87650461  4 - 129401213 g--------a-a--a
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31355120  4 -  89631738 G--------G-G--A
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90752522  4 - 130317789 g--------a-a--a
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              5061  4 +     14296 A--------C-A--A
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               301592  4 -  14710649 g--------a-a--a
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71368  4 -     80779 A--------T-A--A
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                280596  4 -  10118263 g--------t-a--g
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1587861  4 -   6019432 g--------t-a--g
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3903950  4 -   4330536 g--------t-a--g
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                          99  4 +      1835 G--------T-A--G
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189391  4 +    196477 G--------T-A--A
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2034184  4 -   3037898 a--------a-a--a
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               15333  4 +     21681 G--------C-A--A
i Nasalis_larvatus.k141_413338                           C 0 T 113
s Neomonachus_schauinslandi.NINY01007730.1                20307635  4 +  31847680 g--------a-a--a
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149526  4 -   9404916 g--------g-a--a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102586341  4 - 196305487 G--------C-A--A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              265  4 +      2075 g--------c-a--a
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761695  4 + 199412804 G--------C-A--A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1363667  4 +   3988456 g--------t-a--a
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  746978  4 +  11899542 A--------C-A--A
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                              506780  4 -   2017862 g--------a-a--a
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   25249  4 +     28053 G--------G-A--A
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    80249  4 +    102263 G--------T-A--A
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9967  4 -     18566 G--------C-A--A
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147463  4 + 174332312 G--------C-A--A
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462474  4 -    559221 g--------g-a--a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4248  4 +      8798 G--------C-A--A
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696411  4 -   1103335 g--------C-A--A
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    44290  4 +     80009 G--------T-A--A
i Pan_paniscus.KQ411613.1                                I 113 T 113
s Pan_troglodytes.CM009242.2                             189143192  4 + 189151597 G--------T-A--A
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  151287  2 +    230217 -----------A--A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                264496  2 +  18783137 -----------a--a
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4721375  2 -   8748460 -----------a--a
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183443429  4 + 183742232 g--------C-A--A
i Papio_anubis.CM001495.2                                C 0 T 115
s Papio_cynocephalus.k141_4307930                             7075  4 +     20448 G--------C-A--A
i Papio_cynocephalus.k141_4307930                        C 0 T 115
s Papio_hamadryas.Contig39                                20563887  4 +  20919399 G--------C-A--A
i Papio_hamadryas.Contig39                               C 0 T 115
s Papio_kindae.k141_1936966                                   5819  4 +     41871 G--------C-A--A
i Papio_kindae.k141_1936966                              C 0 T 115
s Papio_papio.k141_802527                                     9112  4 +     27711 G--------C-A--A
i Papio_papio.k141_802527                                C 0 T 115
s Papio_ursinus.k141_3428135                                  9181  4 +      9205 G--------C-A--A
i Papio_ursinus.k141_3428135                             C 0 T 115
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12784  4 -     78924 G--------A-A--A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10229  4 +     13100 G--------C-A--A
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8635  4 +     25941 G--------C-A--A
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18194875  4 -  18517816 G--------T-A--A
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28247  4 -     29689 T--------C-A--A
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Piliocolobus_badius.k141_1234363                           43824  4 +     62158 g--------c-a--a
i Piliocolobus_badius.k141_1234363                       C 0 T 109
s Piliocolobus_gordonorum.k141_381342                        38571  4 +     89929 G--------C-A--A
i Piliocolobus_gordonorum.k141_381342                    C 0 T 109
s Piliocolobus_kirkii.k141_448987                            39987  4 +     51399 G--------C-A--A
i Piliocolobus_kirkii.k141_448987                        C 0 T 109
s Piliocolobus_tephrosceles.PDMG02000141.1                14296225  4 -  14605196 G--------C-A--A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 T 109
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1891  4 +     22620 G--------T-A--A
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189131328  4 + 189387572 G--------T-A--A
i Pongo_abelii.CM009266.2                                C 0 T 109
s Pongo_pygmaeus.ctg66                                     9570935  4 +   9816681 G--------T-A--A
i Pongo_pygmaeus.ctg66                                   C 0 T 108
s Presbytis_comata.k141_677006                               73509  4 -     81375 g--------c-a--a
i Presbytis_comata.k141_677006                           C 0 T 113
s Presbytis_mitrata.k141_1087752                              5329  4 +     19060 G--------C-A--A
i Presbytis_mitrata.k141_1087752                         C 0 T 113
s Procavia_capensis.ProCapCap_scaffold_85530                 13469  4 -     22811 A--------A-A--A
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2596863  4 -   4620579 G--------T-G--A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990849  4 +   2598838 g--------T-G--A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29161  4 +     38485 G--------T-G--A
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1204  4 -     13098 G--------T-G--A
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26682  4 +     35766 G--------T-G--A
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4869  4 -     24134 G--------T-G--A
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28694  4 -     67325 G--------T-G--A
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4917  4 -      6182 G--------T-G--A
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            10493  4 -     21651 G--------G-T--A
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            15208  4 -     21811 g--------t-a--a
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40369  4 +     42204 G--------A-A--A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22976914  4 +  28871421 g--------t-a--a
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                6967  4 -      8028 g--------t-a--a
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20274441  4 -  38429054 g--------a-a--a
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15342  4 -     91421 g--------c-a--a
i Pygathrix_cinerea.k141_1153803                         C 0 T 113
s Pygathrix_nigripes_b.ctg100                                 7609462  4 +   7812017 G--------C-A--A
i Pygathrix_nigripes_b.ctg100                               C 0 T 113
s Pygathrix_nigripes_a.k141_215492                             15314  4 -     72585 g--------c-a--a
i Pygathrix_nigripes_a.k141_215492                         C 0 T 113
s Rattus_norvegicus.chr16                                 53570723  4 +  90668790 G--------T-A--A
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             7025  4 -     11128 g--------c-a--a
i Rhinopithecus_bieti.k119_217274                        C 0 T 111
s Rhinopithecus_roxellana.NC_044550.1                     91236374  4 - 195417433 G--------C-A--A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 T 113
s Rhinopithecus_strykeri.ctg102                            7672030  4 +   7961872 G--------C-A--A
i Rhinopithecus_strykeri.ctg102                          C 0 T 111
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87936  4 -     96226 G--------T-A--A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_8081                                   475  4 +     42994 G--------C-C--A
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_57697                                260  4 +      1030 G--------C-C--A
i Saguinus_imperator.k141_57697                          C 0 C 0
s Saguinus_inustus.k141_3945547                                339  4 -      8737 g--------c-c--a
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_285685                               8502  3 +      8564 ---------a-g--a
i Saguinus_labiatus.k141_285685                          C 0 I 5
s Saguinus_midas.LG03                                    209469826  4 + 209938924 G--------C-C--A
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 8461  4 -      9399 g--------c-c--a
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951199  4 - 121099817 G--------C-A--A
i Saimiri_boliviensis.NW_024100920.1                     C 0 T 292
s Saimiri_cassiquiarensis.k141_2188234                       23538  4 +     46362 G--------C-A--A
i Saimiri_cassiquiarensis.k141_2188234                   C 0 T 175
s Saimiri_macrodon.k141_716185                               23633  4 +     45824 G--------C-A--A
i Saimiri_macrodon.k141_716185                           C 0 T 175
s Saimiri_oerstedii.k141_1487881                             40312  4 -     64574 g--------c-a--a
i Saimiri_oerstedii.k141_1487881                         C 0 T 226
s Saimiri_sciureus.k141_2278166                               3384  4 -     23631 g--------c-a--a
i Saimiri_sciureus.k141_2278166                          C 0 T 292
s Saimiri_ustus.k141_1484609                                 23529  4 -     61129 g--------c-a--a
i Saimiri_ustus.k141_1484609                             C 0 T 175
s Sapajus_apella.ctg103                                    5420907  4 -   5703754 g--------a-g--a
i Sapajus_apella.ctg103                                  C 0 T 115
s Sapajus_macrocephalus.k141_351809                          55835  4 -     80660 g--------a-a--g
i Sapajus_macrocephalus.k141_351809                      T 313 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153336  4 -    313613 A--------C-A--A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                          206  4 -     12572 G--------C-A--A
i Semnopithecus_entellus.k141_1672505                    C 0 I 1
s Semnopithecus_hypoleucos.k141_1615806                      27056  4 +     39453 G--------C-A--A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 T 113
s Semnopithecus_johnii.k141_670120                            7574  4 +     27826 G--------C-A--A
i Semnopithecus_johnii.k141_670120                       C 0 T 112
s Semnopithecus_priam.k141_638794                             7096  4 -     19483 g--------c-a--a
i Semnopithecus_priam.k141_638794                        C 0 T 113
s Semnopithecus_schistaceus.k141_1572284                       397  4 -     12762 G--------C-A--A
i Semnopithecus_schistaceus.k141_1572284                 C 0 T 107
s Semnopithecus_vetulus.k141_910252                            258  4 +     13763 G--------C-A--A
i Semnopithecus_vetulus.k141_910252                      C 0 T 112
s Sigmodon_hispidus.SigHis_scaffold_60841                    11977  4 -     12148 g--------a-a--a
i Sigmodon_hispidus.SigHis_scaffold_60841                I 7 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               3888  4 +   1910179 A--------A-A--A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13651153  4 -  18376816 A--------C-A--A
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1954059  4 -   3870691 a--------c-a--a
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30867  4 +     97271 G--------A-A--A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              18457  4 -    196729 G--------A-A--A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6810940  4 +  69701581 g--------t-a--a
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                10933  4 +     41958 G--------T-A--A
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72752  4 +    116680 A--------T-A--A
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118897  4 -    156842 G--------C-G--A
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387354  4 +    539355 G--------C-A--A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               26603  4 +     70052 G--------C-A--A
i Tarsius_lariang.k141_2201908                           C 0 T 110
s Tarsius_wallacei.k141_254427                                1400  4 -     16117 g--------c-a--a
i Tarsius_wallacei.k141_254427                           C 0 T 110
s Theropithecus_gelada.CM009954.1                        186428747  4 + 186847797 g--------C-A--A
i Theropithecus_gelada.CM009954.1                        C 0 T 115
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105568  4 +    114563 T--------C-A--A
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   6536  4 +      8208 G--------T-A--A
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81327  4 +    610378 G--------T-A--A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         11147  4 -     20410 g--------c-a--a
i Trachypithecus_auratus.k141_722599                     C 0 T 113
s Trachypithecus_crepusculus.k141_582567                       261  4 -     12674 g--------c-a--a
i Trachypithecus_crepusculus.k141_582567                 C 0 T 113
s Trachypithecus_cristatus.k141_580354                       11248  4 +     19930 G--------C-A--A
i Trachypithecus_cristatus.k141_580354                   C 0 T 113
s Trachypithecus_francoisi.k141_1412647                       7659  4 -     19997 g--------c-a--a
i Trachypithecus_francoisi.k141_1412647                  C 0 T 113
s Trachypithecus_geei.k141_277701                            47798  4 -     60166 g--------c-a--a
i Trachypithecus_geei.k141_277701                        C 0 T 113
s Trachypithecus_germaini.k141_912491                        15270  4 -     27529 g--------c-a--a
i Trachypithecus_germaini.k141_912491                    C 0 T 113
s Trachypithecus_hatinhensis.k141_143409                     15214  4 -     18194 g--------c-a--A
i Trachypithecus_hatinhensis.k141_143409                 C 0 T 113
s Trachypithecus_laotum.k141_907409                           8926  4 -     21137 g--------c-a--A
i Trachypithecus_laotum.k141_907409                      C 0 T 113
s Trachypithecus_leucocephalus.k141_587342                    7629  4 -     10723 g--------c-a--a
i Trachypithecus_leucocephalus.k141_587342               C 0 T 113
s Trachypithecus_melamera.k141_434728                         6801  4 +      9834 G--------C-A--A
i Trachypithecus_melamera.k141_434728                    C 0 T 113
s Trachypithecus_obscurus.k141_190785                        25114  4 +     32220 G--------C-A--A
i Trachypithecus_obscurus.k141_190785                    C 0 T 113
s Trachypithecus_phayrei.ctg124                            5939216  4 +   6242583 G--------C-A--A
i Trachypithecus_phayrei.ctg124                          C 0 T 113
s Trachypithecus_pileatus.k141_2007326                        8467  4 +     20839 G--------C-A--A
i Trachypithecus_pileatus.k141_2007326                   C 0 T 113
s Trichechus_manatus.JH594705.1                            4293368  4 +  10818551 G--------G-A--A
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2155710  4 +   4065304 G--------C-A--A
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9363  4 -     10553 G--------C-A--A
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   53433  4 -     77625 A--------C-A--A
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4850569  4 -   5085361 a--------a-a--a
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  11528  4 +     50397 G--------T-G--A
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11587  4 +     24756 G--------T-G--A
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5372021  4 -   5488506 G--------T-A--A
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10922  4 -     43706 G--------G-A--A
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          1187  4 +    224448 A--------C-A--A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          5498  4 +     86975 g--------a-a--a
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      15010  4 +     63895 G--------C-A--T
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Alouatta_seniculus.k141_117119                             14962 21 +     50774 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Elephantulus_edwardii.JH947257.1                         1097782  0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6951 1 +     62944 a
s Acinonyx_jubatus.LLWD01001279.1                           827438 1 -   1699592 g
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     70905 1 +     87051 G
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510712 1 -  29979442 g
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             79488 1 -    347723 g
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     74617 1 -     89534 G
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14775 1 -     52922 a
i Allenopithecus_nigroviridis.k141_3361533               T 106 I 106
s Allochrocebus_lhoesti.k141_4309873                         14691 1 -     28001 a
i Allochrocebus_lhoesti.k141_4309873                     T 105 I 105
s Allochrocebus_preussi.k141_1442296                          5187 1 -     18505 a
i Allochrocebus_preussi.k141_1442296                     T 107 I 107
s Allochrocebus_solatus.k141_166128                           6041 1 -     12518 a
i Allochrocebus_solatus.k141_166128                      T 105 I 105
s Alouatta_belzebul.k141_3560514                              7525 1 +     51355 a
i Alouatta_belzebul.k141_3560514                         C 0 I 217
s Alouatta_caraya.k141_1701091                                 642 1 -     36483 a
i Alouatta_caraya.k141_1701091                           C 0 I 209
s Alouatta_discolor.k141_566626                              11085 1 +     28687 a
i Alouatta_discolor.k141_566626                          C 0 I 215
s Alouatta_juara.k141_1509701                                24912 1 +     25266 a
i Alouatta_juara.k141_1509701                            C 0 I 215
s Alouatta_macconnelli.k141_918386                             633 1 -      9457 a
i Alouatta_macconnelli.k141_918386                       C 0 I 215
s Alouatta_nigerrima.k141_3472759                            18219 1 -     18578 a
i Alouatta_nigerrima.k141_3472759                        C 0 I 215
s Alouatta_palliata.k141_2135620                              3606 1 +     47717 a
i Alouatta_palliata.k141_2135620                         C 0 I 212
s Alouatta_puruensis.k141_362188                               311 1 +      5663 a
i Alouatta_puruensis.k141_362188                         C 0 I 219
s Anoura_caudifer.AnoCau_scaffold_1412                      185484 1 +    412891 G
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  15536 1 -     33861 g
i Aotus_azarae.k141_3104676                              C 0 I 205
s Aotus_griseimembra.k141_2240599                            15568 1 -     34016 g
i Aotus_griseimembra.k141_2240599                        C 0 I 217
s Aotus_nancymaae.KZ198451.1                               4297961 1 -   5030052 g
i Aotus_nancymaae.KZ198451.1                             C 0 I 204
s Aotus_trivirgatus.k141_2152450                             15570 1 -     34685 g
i Aotus_trivirgatus.k141_2152450                         C 0 I 204
s Aotus_vociferans.k141_344750                               28694 1 -     47192 g
i Aotus_vociferans.k141_344750                           C 0 I 205
s Aplodontia_rufa.AprRuf_scaffold_68852                      12736 1 +     20879 G
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4892 1 +     43469 G
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  53819 1 -     92717 A
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54441 1 +     85213 A
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             5584 1 -     10423 g
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             25053 1 +     31915 G
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590738 1 - 189096842 g
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                               137 1 -     12329 G
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002525 1 -  17673402 G
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334983 1 -   7040546 G
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  403267 1 -   1652518 g
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17799303 1 -  60362399 G
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                       51 1 -     43241 G
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034746 1 -   9314153 G
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17959222 1 -  59632846 G
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18500523 1 +  63665305 G
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1185 1 -     12242 G
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007247396.1                           201481 1 +    308752 a
i Carlito_syrichta.NW_007247396.1                        I 2 n 1
s Carollia_perspicillata.CarPer_scaffold_92756                5241 1 -     11696 G
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137203 1 +    179628 G
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     93196 1 +    217609 G
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                         10219 1 -     11392 g
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               6287 1 -      7577 g
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25652611 1 +  26074798 g
i Cebus_albifrons.Contig27                               I 485 I 345
s Cebus_olivaceus.k141_398305                                 1702 1 +      1777 g
i Cebus_olivaceus.k141_398305                            I 6 n 325
s Cebus_unicolor.k141_544048                                 50041 1 -     74725 g
i Cebus_unicolor.k141_544048                             C 0 n 0
s Cephalopachus_bancanus.k141_1423433                         5497 1 +     31688 a
i Cephalopachus_bancanus.k141_1423433                    T 117 I 117
s Ceratotherium_simum.JH767749.1                          12231583 1 +  27778364 g
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2610 1 -     25243 G
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4475696 1 +   4669795 a
i Cercocebus_atys.KQ010504.1                             T 115 I 115
s Cercocebus_chrysogaster.k141_393940                        14241 1 -     19203 a
i Cercocebus_chrysogaster.k141_393940                    I 10 n 1
s Cercocebus_lunulatus.k141_3342297                            857 1 -     14043 a
i Cercocebus_lunulatus.k141_3342297                      T 115 I 115
s Cercocebus_torquatus.k141_3057011                           8893 1 +     27781 a
i Cercocebus_torquatus.k141_3057011                      T 112 I 112
s Cercopithecus_ascanius.k141_1024104                         9062 1 -     20310 a
i Cercopithecus_ascanius.k141_1024104                    T 107 I 107
s Cercopithecus_cephus.k141_1078548                          12041 1 +     29689 a
i Cercopithecus_cephus.k141_1078548                      T 108 I 108
s Cercopithecus_diana.k141_1150327                            6795 1 -     20078 a
i Cercopithecus_diana.k141_1150327                       T 107 I 107
s Cercopithecus_hamlyni.k141_187466                          14718 1 -     27936 a
i Cercopithecus_hamlyni.k141_187466                      T 101 I 101
s Cercopithecus_lowei.k141_1854285                            3582 1 -     17152 a
i Cercopithecus_lowei.k141_1854285                       T 107 I 107
s Cercopithecus_albogularis.ctg5                                38817121 1 +  39242232 a
i Cercopithecus_albogularis.ctg5                               T 107 I 107
s Cercopithecus_mona.ctg39                                21222813 1 -  21565898 a
i Cercopithecus_mona.ctg39                               T 107 I 107
s Cercopithecus_neglectus.k141_2526306                       39931 1 -     53127 a
i Cercopithecus_neglectus.k141_2526306                   T 107 I 107
s Cercopithecus_nictitans.k141_1119862                         182 1 +     13442 a
i Cercopithecus_nictitans.k141_1119862                   T 107 I 107
s Cercopithecus_petaurista.k141_807961                       14731 1 -     27947 a
i Cercopithecus_petaurista.k141_807961                   T 107 I 107
s Cercopithecus_pogonias.k141_822820                         14707 1 +     17596 a
i Cercopithecus_pogonias.k141_822820                     T 107 I 107
s Cercopithecus_roloway.k141_2581234                           754 1 +     14005 a
i Cercopithecus_roloway.k141_2581234                     T 107 I 107
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             664 1 -      8501 G
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             21189 1 -     52598 A
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16554 1 +     57038 a
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1252933 1 +   2543920 G
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2206961                            266 1 -     15524 g
i Chiropotes_albinasus.k141_2206961                      C 0 I 206
s Chlorocebus_aethiops.ctg25                              18428691 1 -  18827391 a
i Chlorocebus_aethiops.ctg25                             T 107 I 107
s Chlorocebus_pygerythrus.k141_1025673                       15128 1 -     50209 a
i Chlorocebus_pygerythrus.k141_1025673                   T 107 I 107
s Chlorocebus_sabaeus.CM001947.1                         135422128 1 + 135778131 a
i Chlorocebus_sabaeus.CM001947.1                         T 107 I 107
s Choloepus_didactylus.ChoDid_scaffold_45914                 18444 1 +     19366 G
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            173521 1 +    839153 G
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1910637 1 +   2368649 a
i Colobus_angolensis.KN981557.1                          T 109 I 109
s Colobus_guereza.LG01                                   199948998 1 + 200372422 A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37171 1 +     84244 a
i Colobus_polykomos.k141_906115                          T 109 I 109
s Condylura_cristata.JH655891.1                           17548221 1 -  53390261 A
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14542 1 -     20389 G
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 50313 1 +     63868 A
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11667672 1 + 224834208 G
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               3124 1 -     19598 G
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 I 2
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28625 1 -     87169 G
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837203 1 +   1526836 C
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35893 1 +     51376 G
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            63671 1 +   2246927 G
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537416 1 -  12879189 A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630258 1 +  20541912 g
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673434 1 +   1390856 g
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36527 1 +     67921 G
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Echinops_telfairi.JH980293.1                            48780703 1 + 111700974 G
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.KE759718.1                                  10659 1 +     11740 g
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          20406 1 -    110024 G
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                             537 1 +      8657 G
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16329446 1 -  41312741 g
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2145861 1 -  14770903 g
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1283688 1 +   4378816 g
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18531508 1 -  39960074 g
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               33537 1 +    498745 g
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3328364 1 -   7059049 G
i Erinaceus_europaeus.JH835339.1                         C 0 I 2
s Erythrocebus_patas.Contig38                             21205298 1 -  21539334 a
i Erythrocebus_patas.Contig38                            T 105 I 105
s Eulemur_albifrons.k141_342033                              13901 1 -     14127 A
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6615 1 -     16928 A
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15647 1 -     25546 A
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12843 1 +     26330 A
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14078 1 +     23973 a
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12840 1 +     75513 A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10770 1 +     97555 a
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              261 1 +     13026 a
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4314 1 -     17153 A
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13887 1 +    111500 a
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237089 1 + 206538554 g
i Felis_catus.CM001381.2                                 C 0 I 2
s Felis_catus_fca126.CM031415.1                           20195932 1 + 205367284 g
i Felis_catus_fca126.CM031415.1                          C 0 I 2
s Felis_nigripes.FelNig_flattened_line_20823                  9676 1 -     36744 G
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             850561 1 +   3816255 g
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg2040                                     426732 1 -    453645 A
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4422 1 +     11339 A
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            1720 1 +     41679 A
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1317 1 -      9135 g
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            31484 1 +     49224 G
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              16092 1 -     32273 a
i Gorilla_beringei.k141_3596273                          T 114 I 114
s Gorilla_gorilla.LT578341.1                             186338230 1 + 186649187 a
i Gorilla_gorilla.LT578341.1                             T 113 I 113
s Graphiurus_murinus.GraMur_scaffold_10447                   32726 1 +     78134 G
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6946 1 -     19426 A
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12095 1 -     15286 A
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13734 1 +     18253 A
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13835 1 -     41752 A
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13672 1 -     16460 A
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242458 1 +    327341 G
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20662350 1 +  22651954 G
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1018 1 +      7595 C
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hoolock_leuconedys.ctg274                                    434904 1 +    630532 a
i Hoolock_leuconedys.ctg274                                 T 101 I 101
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45152 1 +     55795 G
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83239 1 +    135385 G
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7521008 1 -   7955117 a
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   22635 1 +     31101 A
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8276918 1 -   9596543 G
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    16506 1 -     42476 G
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15524187 1 -  30322482 A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7863 1 +     64341 G
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                            203 1 -     35062 g
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        7891 1 +     35603 G
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    29307 1 +     38576 G
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         26007 1 +     66356 G
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         11079 1 -     23766 A
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29140 1 +     45836 A
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1678 1 +     25010 A
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27076 1 +     54090 A
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3043185 1 +   3914936 g
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6607 1 -     14121 g
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437239 1 +   1826925 a
i Lophocebus_aterrimus.ctg367                            T 117 I 117
s Loris_lydekkerianus.k141_2539221                            5981 1 +     11245 A
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004801 1 +   6120653 A
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4217451 1 -  43346337 C
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17955462 1 -  59628241 G
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               7061 1 +     40492 a
i Macaca_arctoides.k141_2326796                          T 106 I 106
s Macaca_assamensis.Contig5                               59676320 1 +  60120075 a
i Macaca_assamensis.Contig5                              T 106 I 106
s Macaca_cyclopis.k119_18836                                 12833 1 -     26193 a
i Macaca_cyclopis.k119_18836                             T 109 I 109
s Macaca_fascicularis.k141_814140                            80617 1 -    114318 a
i Macaca_fascicularis.k141_814140                        T 109 I 109
s Macaca_fuscata.k119_255327                                  6308 1 -     23192 a
i Macaca_fuscata.k119_255327                             T 105 I 105
s Macaca_leonina.k141_3550399                                15777 1 -     29190 a
i Macaca_leonina.k141_3550399                            T 109 I 109
s Macaca_maura.k141_2733130                                  24342 1 +     37952 a
i Macaca_maura.k141_2733130                              T 109 I 109
s Macaca_mulatta.NC_041758.1                             186839431 1 + 187317192 a
i Macaca_mulatta.NC_041758.1                             T 109 I 109
s Macaca_nemestrina.KQ007038.1                            25457994 1 -  25927173 a
i Macaca_nemestrina.KQ007038.1                           T 109 I 109
s Macaca_nigra.k141_1655396                                  80190 1 +     89720 a
i Macaca_nigra.k141_1655396                              T 109 I 109
s Macaca_radiata.k141_3680011                                 7191 1 +     20474 a
i Macaca_radiata.k141_3680011                            T 109 I 109
s Macaca_siberu.k141_635500                                   6991 1 -     14993 a
i Macaca_siberu.k141_635500                              T 109 I 109
s Macaca_silenus.Contig273                                  329857 1 -    668171 a
i Macaca_silenus.Contig273                               T 109 I 109
s Macaca_thibetana.k99_256239                                 5307 1 -     24072 a
i Macaca_thibetana.k99_256239                            T 106 I 106
s Macaca_tonkeana.k141_1498238                               25929 1 -     45290 a
i Macaca_tonkeana.k141_1498238                           T 109 I 109
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90752 1 +     94391 G
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23937516 1 -  24302211 a
i Mandrillus_leucophaeus.scaffold280                     T 115 I 115
s Mandrillus_sphinx.Contig270                               351640 1 +    752769 a
i Mandrillus_sphinx.Contig270                            T 115 I 115
s Manis_javanica.JSZB01003497.1                              18636 1 +    737560 g
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              50629 1 -    317179 g
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33103208 1 -  40650429 a
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        10467 1 -    207569 G
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10183 1 +     13704 G
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 32853 1 +    140813 A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12182347 1 -  29670104 G
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                6098 1 -      7380 g
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_2457295                                327 1 +      1079 G
i Mico_humeralifer.k141_2457295                          C 0 C 0
s Mico_schneideri.k141_1950671                                      6110 1 -      7356 g
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18291612 1 -  93316391 A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    22452 1 -    145209 A
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                15785 1 -     19307 G
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11260585 1 -  27267610 G
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850747 1 +   8254450 g
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34428 1 +     64694 G
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9229 1 -     28506 a
i Miopithecus_ogouensis.k141_534055                      T 106 I 106
s Mirounga_angustirostris.MirAng_flattened_line_93702         6053 1 -      8324 G
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      9157 1 -     37649 A
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141757 1 -    366855 G
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35558 1 +     37127 G
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           6957 1 +     14753 A
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84361467 1 - 120012414 g
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87650465 1 - 129401213 g
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31355124 1 -  89631738 G
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90752526 1 - 130317789 g
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              5065 1 +     14296 G
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               301596 1 -  14710649 g
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71372 1 -     80779 G
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                280600 1 -  10118263 g
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1587865 1 -   6019432 g
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3903954 1 -   4330536 g
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                         103 1 +      1835 G
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189395 1 +    196477 G
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2034188 1 -   3037898 g
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               15224 1 +     21681 a
i Nasalis_larvatus.k141_413338                           T 113 I 113
s Neomonachus_schauinslandi.NINY01007730.1                20307639 1 +  31847680 g
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149530 1 -   9404916 g
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102586345 1 - 196305487 A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              269 1 +      2075 a
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761699 1 + 199412804 A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1363671 1 +   3988456 a
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  746982 1 +  11899542 G
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                              506784 1 -   2017862 g
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   25253 1 +     28053 G
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    80253 1 +    102263 G
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9971 1 -     18566 G
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147467 1 + 174332312 G
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462478 1 -    559221 g
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4252 1 +      8798 A
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696415 1 -   1103335 A
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    44181 1 +     80009 a
i Pan_paniscus.KQ411613.1                                T 113 I 113
s Pan_troglodytes.CM009242.2                             189143196 1 + 189151597 A
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  151289 1 +    230217 G
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                264498 1 +  18783137 g
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4721377 1 -   8748460 g
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183443318 1 + 183742232 a
i Papio_anubis.CM001495.2                                T 115 I 115
s Papio_cynocephalus.k141_4307930                             6964 1 +     20448 a
i Papio_cynocephalus.k141_4307930                        T 115 I 115
s Papio_hamadryas.Contig39                                20563776 1 +  20919399 a
i Papio_hamadryas.Contig39                               T 115 I 115
s Papio_kindae.k141_1936966                                   5708 1 +     41871 a
i Papio_kindae.k141_1936966                              T 115 I 115
s Papio_papio.k141_802527                                     9001 1 +     27711 a
i Papio_papio.k141_802527                                T 115 I 115
s Papio_ursinus.k141_3428135                                  9070 1 +      9205 a
i Papio_ursinus.k141_3428135                             T 115 I 115
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12788 1 -     78924 G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18194879 1 -  18517816 G
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28251 1 -     29689 G
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Piliocolobus_badius.k141_1234363                           43719 1 +     62158 a
i Piliocolobus_badius.k141_1234363                       T 109 I 109
s Piliocolobus_gordonorum.k141_381342                        38466 1 +     89929 a
i Piliocolobus_gordonorum.k141_381342                    T 109 I 109
s Piliocolobus_kirkii.k141_448987                            39882 1 +     51399 a
i Piliocolobus_kirkii.k141_448987                        T 109 I 109
s Piliocolobus_tephrosceles.PDMG02000141.1                14296120 1 -  14605196 a
i Piliocolobus_tephrosceles.PDMG02000141.1               T 109 I 109
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1895 1 +     22620 G
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189131223 1 + 189387572 a
i Pongo_abelii.CM009266.2                                T 109 I 109
s Pongo_pygmaeus.ctg66                                     9570831 1 +   9816681 a
i Pongo_pygmaeus.ctg66                                   T 108 I 108
s Presbytis_comata.k141_677006                               73400 1 -     81375 a
i Presbytis_comata.k141_677006                           T 113 I 113
s Presbytis_mitrata.k141_1087752                              5220 1 +     19060 a
i Presbytis_mitrata.k141_1087752                         T 113 I 113
s Procavia_capensis.ProCapCap_scaffold_85530                 13473 1 -     22811 C
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2596867 1 -   4620579 A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990853 1 +   2598838 A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29165 1 +     38485 A
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1208 1 -     13098 A
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26686 1 +     35766 A
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4873 1 -     24134 A
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28698 1 -     67325 A
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4921 1 -      6182 A
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            10497 1 -     21651 A
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            15212 1 -     21811 g
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40373 1 +     42204 G
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22976918 1 +  28871421 G
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                6971 1 -      8028 G
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20274445 1 -  38429054 g
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15233 1 -     91421 a
i Pygathrix_cinerea.k141_1153803                         T 113 I 113
s Pygathrix_nigripes_b.ctg100                                 7609353 1 +   7812017 a
i Pygathrix_nigripes_b.ctg100                               T 113 I 113
s Pygathrix_nigripes_a.k141_215492                             15205 1 -     72585 a
i Pygathrix_nigripes_a.k141_215492                         T 113 I 113
s Rattus_norvegicus.chr16                                 53570727 1 +  90668790 G
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             6918 1 -     11128 a
i Rhinopithecus_bieti.k119_217274                        T 111 I 111
s Rhinopithecus_roxellana.NC_044550.1                     91236265 1 - 195417433 a
i Rhinopithecus_roxellana.NC_044550.1                    T 113 I 113
s Rhinopithecus_strykeri.ctg102                            7671923 1 +   7961872 a
i Rhinopithecus_strykeri.ctg102                          T 111 I 111
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87940 1 -     96226 G
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_8081                                   479 1 +     42994 G
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_57697                                264 1 +      1030 G
i Saguinus_imperator.k141_57697                          C 0 C 0
s Saguinus_inustus.k141_3945547                                343 1 -      8737 g
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_midas.LG03                                    209469830 1 + 209938924 G
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 8465 1 -      9399 g
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119950911 1 - 121099817 g
i Saimiri_boliviensis.NW_024100920.1                     T 292 I 292
s Saimiri_cassiquiarensis.k141_2188234                       23367 1 +     46362 g
i Saimiri_cassiquiarensis.k141_2188234                   T 175 I 175
s Saimiri_macrodon.k141_716185                               23462 1 +     45824 g
i Saimiri_macrodon.k141_716185                           T 175 I 175
s Saimiri_oerstedii.k141_1487881                             40090 1 -     64574 g
i Saimiri_oerstedii.k141_1487881                         T 226 I 226
s Saimiri_sciureus.k141_2278166                               3096 1 -     23631 g
i Saimiri_sciureus.k141_2278166                          T 292 I 292
s Saimiri_ustus.k141_1484609                                 23358 1 -     61129 g
i Saimiri_ustus.k141_1484609                             T 175 I 175
s Sapajus_apella.ctg103                                    5420796 1 -   5703754 g
i Sapajus_apella.ctg103                                  T 115 I 115
s Sapajus_macrocephalus.k141_351809                          55839 1 -     80660 c
i Sapajus_macrocephalus.k141_351809                      C 0 I 313
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153340 1 -    313613 G
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_11662                          19742 1 -     19888 A
i Semnopithecus_entellus.k141_11662                      I 6 n 1
s Semnopithecus_hypoleucos.k141_1615806                      26947 1 +     39453 a
i Semnopithecus_hypoleucos.k141_1615806                  T 113 I 113
s Semnopithecus_johnii.k141_670120                            7466 1 +     27826 a
i Semnopithecus_johnii.k141_670120                       T 112 I 112
s Semnopithecus_priam.k141_638794                             6987 1 -     19483 a
i Semnopithecus_priam.k141_638794                        T 113 I 113
s Semnopithecus_schistaceus.k141_1572284                       294 1 -     12762 a
i Semnopithecus_schistaceus.k141_1572284                 T 107 I 107
s Semnopithecus_vetulus.k141_910252                            150 1 +     13763 A
i Semnopithecus_vetulus.k141_910252                      T 112 I 112
s Sigmodon_hispidus.SigHis_scaffold_60841                    11981 1 -     12148 a
i Sigmodon_hispidus.SigHis_scaffold_60841                C 0 n 0
s Sorex_araneus.JH798187.1                                13651157 1 -  18376816 G
i Sorex_araneus.JH798187.1                               C 0 I 3
s Spermophilus_dauricus.KZ294078.1                         1954063 1 -   3870691 a
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30871 1 +     97271 G
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              18461 1 -    196729 G
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6810944 1 +  69701581 g
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                10937 1 +     41958 G
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72756 1 +    116680 G
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118901 1 -    156842 G
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387358 1 +    539355 G
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               26497 1 +     70052 g
i Tarsius_lariang.k141_2201908                           T 110 I 110
s Tarsius_wallacei.k141_254427                                1294 1 -     16117 g
i Tarsius_wallacei.k141_254427                           T 110 I 110
s Theropithecus_gelada.CM009954.1                        186428636 1 + 186847797 a
i Theropithecus_gelada.CM009954.1                        T 115 I 115
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105572 1 +    114563 G
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   6540 1 +      8208 G
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81331 1 +    610378 G
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         11038 1 -     20410 a
i Trachypithecus_auratus.k141_722599                     T 113 I 113
s Trachypithecus_crepusculus.k141_582567                       152 1 -     12674 a
i Trachypithecus_crepusculus.k141_582567                 T 113 I 113
s Trachypithecus_cristatus.k141_580354                       11139 1 +     19930 a
i Trachypithecus_cristatus.k141_580354                   T 113 I 113
s Trachypithecus_francoisi.k141_1412647                       7550 1 -     19997 a
i Trachypithecus_francoisi.k141_1412647                  T 113 I 113
s Trachypithecus_geei.k141_277701                            47689 1 -     60166 a
i Trachypithecus_geei.k141_277701                        T 113 I 113
s Trachypithecus_germaini.k141_912491                        15161 1 -     27529 a
i Trachypithecus_germaini.k141_912491                    T 113 I 113
s Trachypithecus_hatinhensis.k141_143409                     15105 1 -     18194 a
i Trachypithecus_hatinhensis.k141_143409                 T 113 I 113
s Trachypithecus_laotum.k141_907409                           8817 1 -     21137 a
i Trachypithecus_laotum.k141_907409                      T 113 I 113
s Trachypithecus_leucocephalus.k141_587342                    7520 1 -     10723 a
i Trachypithecus_leucocephalus.k141_587342               T 113 I 113
s Trachypithecus_melamera.k141_434728                         6692 1 +      9834 a
i Trachypithecus_melamera.k141_434728                    T 113 I 113
s Trachypithecus_obscurus.k141_190785                        25005 1 +     32220 a
i Trachypithecus_obscurus.k141_190785                    T 113 I 113
s Trachypithecus_phayrei.ctg124                            5939107 1 +   6242583 a
i Trachypithecus_phayrei.ctg124                          T 113 I 113
s Trachypithecus_pileatus.k141_2007326                        8358 1 +     20839 a
i Trachypithecus_pileatus.k141_2007326                   T 113 I 113
s Trichechus_manatus.JH594705.1                            4293372 1 +  10818551 G
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2155714 1 +   4065304 G
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9367 1 -     10553 G
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   53437 1 -     77625 G
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 3
s Ursus_maritimus.KK499267.1                               4850573 1 -   5085361 g
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  11532 1 +     50397 A
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11591 1 +     24756 A
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5372025 1 -   5488506 G
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10926 1 -     43706 G
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          1191 1 +    224448 G
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          5502 1 +     86975 g
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      15014 1 +     63895 G
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Saguinus_labiatus.k141_285685                               8505 5 +      8564 I
e Alouatta_seniculus.k141_117119                             14962 21 +     50774 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Perodicticus_potto.k141_1092580                             8639 0 +     25941 C
e Perodicticus_ibeanus.k141_855320                           10233 0 +     13100 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Solenodon_paradoxus.SolPar_flattened_line_126               3892 0 +   1910179 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Elephantulus_edwardii.JH947257.1                         1097782 0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    6186 0 +    198055 C
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Arctocebus_calabarensis.k141_2318572                       11589 0 +     14667 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6952 13 +     62944 aag--ga-------------------aa-----------------t-g------g--t----------tt
s Acinonyx_jubatus.LLWD01001279.1                           827439 14 -   1699592 aag--ga-------------------ac-----------------TCA------A--C----------TT
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     70906 13 +     87051 AAG--GA-------------------AA-----------------T-G------G--T----------TT
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 11
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510713 13 -  29979442 aag--ga-------------------aa-----------------t-g------t--t----------tt
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             79489 13 -    347723 aag--ga-------------------aa-----------------t-g------t--t----------tt
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     74618 13 -     89534 AAG--AA-------------------AA-----------------T-G------G--T----------TT
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14882 13 -     52922 a--agga-------------------aa-----------------t-g------g--t----------tt
i Allenopithecus_nigroviridis.k141_3361533               I 106 C 0
s Allochrocebus_lhoesti.k141_4309873                         14797 11 -     28001 a----ga-------------------aa-----------------t-g------g--t----------tt
i Allochrocebus_lhoesti.k141_4309873                     I 105 C 0
s Allochrocebus_preussi.k141_1442296                          5295 11 -     18505 a----ga-------------------aa-----------------t-g------g--t----------tt
i Allochrocebus_preussi.k141_1442296                     I 107 C 0
s Allochrocebus_solatus.k141_166128                           6147 11 -     12518 a----ga-------------------aa-----------------t-g------g--t----------tt
i Allochrocebus_solatus.k141_166128                      I 105 C 0
s Alouatta_belzebul.k141_3560514                              7743  8 +     51355 --------------------------aa-----------------T-T------C--T----------TT
i Alouatta_belzebul.k141_3560514                         I 217 C 0
s Alouatta_caraya.k141_1701091                                 852  8 -     36483 --------------------------aa-----------------t-t------c--t----------tt
i Alouatta_caraya.k141_1701091                           I 209 C 0
s Alouatta_discolor.k141_566626                              11301  8 +     28687 --------------------------aa-----------------T-T------C--T----------TT
i Alouatta_discolor.k141_566626                          I 215 C 0
s Alouatta_juara.k141_1509701                                25128  8 +     25266 --------------------------aa-----------------T-T------C--T----------TT
i Alouatta_juara.k141_1509701                            I 215 C 0
s Alouatta_macconnelli.k141_918386                             849  8 -      9457 --------------------------aa-----------------t-t------c--t----------tt
i Alouatta_macconnelli.k141_918386                       I 215 C 0
s Alouatta_nigerrima.k141_3472759                            18435  8 -     18578 --------------------------aa-----------------t-t------c--t----------tt
i Alouatta_nigerrima.k141_3472759                        I 215 C 0
s Alouatta_palliata.k141_2135620                              3819  8 +     47717 --------------------------AA-----------------T-T------C--T----------TT
i Alouatta_palliata.k141_2135620                         I 212 C 0
s Alouatta_puruensis.k141_362188                               531  8 +      5663 --------------------------aa-----------------T-T------G--T----------TT
i Alouatta_puruensis.k141_362188                         I 219 C 0
s Alouatta_seniculus.k141_117119                             14983  8 +     50774 --------------------------AA-----------------T-T------C--T----------TT
i Alouatta_seniculus.k141_117119                         I 21 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185485 13 +    412891 GAG--AA-------------------AC-----------------T-G------T--T----------TT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  15742 11 -     33861 --g--ga-------------------aa-----------------t-t------c--t----------tt
i Aotus_azarae.k141_3104676                              I 205 C 0
s Aotus_griseimembra.k141_2240599                            15786 11 -     34016 --g--ga-------------------aa-----------------t-t------c--t----------tt
i Aotus_griseimembra.k141_2240599                        I 217 C 0
s Aotus_nancymaae.KZ198451.1                               4298166 11 -   5030052 --g--ga-------------------aa-----------------t-t------c--T----------TT
i Aotus_nancymaae.KZ198451.1                             I 204 C 0
s Aotus_trivirgatus.k141_2152450                             15775 11 -     34685 --g--ga-------------------aa-----------------t-t------c--t----------tt
i Aotus_trivirgatus.k141_2152450                         I 204 C 0
s Aotus_vociferans.k141_344750                               28900 11 -     47192 --g--ga-------------------aa-----------------t-t------c--t----------tt
i Aotus_vociferans.k141_344750                           I 205 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      12737 13 +     20879 AAG--GA-------------------AA-----------------T-A------G--T----------TT
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       11589  9 +     14667 ------A-------------------TA-----------------T-G------G--T----------TT
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4893 13 +     43469 GAG--AG-------------------AC-----------------T-G------T--T----------TT
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  53820 13 -     92717 AAG--GA-------------------TA-----------------T-G------G--T----------TT
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54442 13 +     85213 AAG--GA-------------------TA-----------------T-G------G--T----------TT
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             5585 13 -     10423 aag--ga-------------------aa-----------------t-t------c--t----------tt
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             25054 13 +     31915 AAG--GA-------------------AA-----------------T-T------C--T----------TT
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590739 13 - 189096842 aag--ga-------------------aa-----------------t-t------c--t----------tt
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                               138 13 -     12329 AAG--GA-------------------AA-----------------T-T------C--T----------TT
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002526 13 -  17673402 ATG--GA-------------------AA-----------------T-G------T--T----------TC
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334984 13 -   7040546 ATG--GA-------------------AA-----------------T-G------T--T----------TC
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  403268 13 -   1652518 atg--ga-------------------aa-----------------T-G------T--T----------TC
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17799304 13 -  60362399 AAG--GA-------------------AA-----------------T-G------T--T----------TT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                       52 13 -     43241 AAG--GA-------------------AA-----------------T-G------T--T----------TT
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034747 13 -   9314153 AAG--GA-------------------AA-----------------T-G------T--T----------TT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17959223 13 -  59632846 AAG--GA-------------------AA-----------------T-G------T--T----------TT
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18500524 13 +  63665305 AAG--GA-------------------AA-----------------T-G------T--T----------TT
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1186 13 -     12242 AAG--AA-------------------AG-----------------T-G------C--A----------TT
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           156117 13 -    496798 aag--aa-------------------aa-----------------T-G------C--T----------TT
i Carlito_syrichta.NW_007259797.1                        I 1 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5242 13 -     11696 GAG--AA-------------------AC-----------------C-T------T--T----------TT
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137204 14 +    179628 AAG--GAA------------------AA-----------------T-G------G--T----------TT
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     93197 13 +    217609 AAG--GA-------------------CA-----------------T-G------T--T----------TC
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                         10220 13 -     11392 aag--ga-------------------aa-----------------t-t------c--t----------tt
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               6288 13 -      7577 aag--ga-------------------aa-----------------t-t------c--t----------tt
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25652957 13 +  26074798 aag--ga-------------------aa-----------------c-t------c--t----------tt
i Cebus_albifrons.Contig27                               I 345 C 0
s Cebus_olivaceus.k141_1764483                                 895 13 +     28840 AAG--GA-------------------AA-----------------C-T------C--T----------TT
i Cebus_olivaceus.k141_1764483                           I 325 C 0
s Cebus_unicolor.k141_1837183                                  620 13 +     14051 AAG--GA-------------------AA-----------------C-T------C--T----------TT
i Cebus_unicolor.k141_1837183                            I 5 C 0
s Cephalopachus_bancanus.k141_1423433                         5615 13 +     31688 aag--aa-------------------aA-----------------T-G------C--T----------TT
i Cephalopachus_bancanus.k141_1423433                    I 117 C 0
s Ceratotherium_simum.JH767749.1                          12231584 13 +  27778364 aag--ga-------------------aa-----------------T-G------T--T----------TT
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2611 13 -     25243 AAG--GA-------------------AA-----------------T-G------T--T----------TT
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4475812 11 +   4669795 A----GA-------------------AA-----------------T-G------G--T----------TT
i Cercocebus_atys.KQ010504.1                             I 115 C 0
s Cercocebus_chrysogaster.k141_1540778                         316 11 +     17872 A----GA-------------------AA-----------------T-G------G--T----------TT
i Cercocebus_chrysogaster.k141_1540778                   I 1 C 0
s Cercocebus_lunulatus.k141_3342297                            973 11 -     14043 a----ga-------------------aa-----------------t-g------g--t----------tt
i Cercocebus_lunulatus.k141_3342297                      I 115 C 0
s Cercocebus_torquatus.k141_3057011                           9006 11 +     27781 A----GA-------------------AA-----------------T-G------G--T----------TT
i Cercocebus_torquatus.k141_3057011                      I 112 C 0
s Cercopithecus_ascanius.k141_1024104                         9170 13 -     20310 a--agga-------------------aa-----------------t-g------g--t----------tt
i Cercopithecus_ascanius.k141_1024104                    I 107 C 0
s Cercopithecus_cephus.k141_1078548                          12150 13 +     29689 A--AGGA-------------------AA-----------------T-G------G--T----------TT
i Cercopithecus_cephus.k141_1078548                      I 108 C 0
s Cercopithecus_diana.k141_1150327                            6903 11 -     20078 a----ga-------------------aa-----------------t-g------g--t----------tt
i Cercopithecus_diana.k141_1150327                       I 107 C 0
s Cercopithecus_hamlyni.k141_187466                          14820 11 -     27936 a----ga-------------------aa-----------------t-g------g--t----------tt
i Cercopithecus_hamlyni.k141_187466                      I 101 C 0
s Cercopithecus_lowei.k141_1854285                            3690 11 -     17152 a----ga-------------------aa-----------------t-g------g--t----------tt
i Cercopithecus_lowei.k141_1854285                       I 107 C 0
s Cercopithecus_albogularis.ctg5                                38817229 13 +  39242232 A--AGGA-------------------AA-----------------T-G------G--T----------TT
i Cercopithecus_albogularis.ctg5                               I 107 C 0
s Cercopithecus_mona.ctg39                                21222921 11 -  21565898 a----ga-------------------aa-----------------t-g------g--t----------tt
i Cercopithecus_mona.ctg39                               I 107 C 0
s Cercopithecus_neglectus.k141_2526306                       40039 11 -     53127 a----ga-------------------aa-----------------t-g------g--t----------tt
i Cercopithecus_neglectus.k141_2526306                   I 107 C 0
s Cercopithecus_nictitans.k141_1119862                         290 11 +     13442 A----GA-------------------AA-----------------T-G------G--T----------TT
i Cercopithecus_nictitans.k141_1119862                   I 107 C 0
s Cercopithecus_petaurista.k141_807961                       14839 11 -     27947 a----ga-------------------aa-----------------t-g------g--t----------tt
i Cercopithecus_petaurista.k141_807961                   I 107 C 0
s Cercopithecus_pogonias.k141_822820                         14815 11 +     17596 A----GA-------------------AA-----------------T-G------G--T----------TT
i Cercopithecus_pogonias.k141_822820                     I 107 C 0
s Cercopithecus_roloway.k141_2581234                           862 11 +     14005 A----GA-------------------AA-----------------T-G------G--T----------TT
i Cercopithecus_roloway.k141_2581234                     I 107 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             665 13 -      8501 AAG--GA-------------------AA-----------------T-G------G--T----------TT
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             21190 13 -     52598 AAG--GA-------------------TA-----------------T-G------G--T----------TT
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16555 13 +     57038 aag--GA-------------------TA-----------------T-G------G--T----------TT
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1252934 13 +   2543920 AAG--GA-------------------AA-----------------T-T------C--A----------TT
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2206961                            473 26 -     15524 ------a-------------------aaatccagccagaaggaaat-t------c--t----------tt
i Chiropotes_albinasus.k141_2206961                      I 206 C 0
s Chlorocebus_aethiops.ctg25                              18428799 11 -  18827391 a----ga-------------------aa-----------------t-g------g--t----------tt
i Chlorocebus_aethiops.ctg25                             I 107 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15236 11 -     50209 a----ga-------------------aa-----------------t-g------g--t----------tt
i Chlorocebus_pygerythrus.k141_1025673                   I 107 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422236 11 + 135778131 A----GA-------------------AA-----------------T-G------G--T----------TT
i Chlorocebus_sabaeus.CM001947.1                         I 107 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 18445 13 +     19366 AAG--GA-------------------AA-----------------T-G------G--T----------TT
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            173522 13 +    839153 AAG--GA-------------------AA-----------------T-G------G--T----------TT
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1910747 13 +   2368649 AAG--GA-------------------AA-----------------T-G------G--T----------TT
i Colobus_angolensis.KN981557.1                          I 109 C 0
s Colobus_guereza.LG01                                   199948999 13 + 200372422 AAG--GA-------------------AA-----------------T-G------G--T----------TT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37281 13 +     84244 AAG--GA-------------------AA-----------------T-G------G--T----------TT
i Colobus_polykomos.k141_906115                          I 109 C 0
s Condylura_cristata.JH655891.1                           17548222 13 -  53390261 AAA--GA-------------------CA-----------------T-A------G--T----------TT
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14543 13 -     20389 AAG--AA-------------------AA-----------------T-G------C--T----------GT
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 3
s Cricetomys_gambianus.CriGam_scaffold_18520                 50314 13 +     63868 ATG--GA-------------------AA-----------------T-G------G--C----------TT
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11667673 13 + 224834208 AAG--GA-------------------AA-----------------T-G------G--T----------TT
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               3127  7 -     19598 -----------------------------------------------AA-AATGG---------------
i Crocidura_indochinensis.CroInd_scaffold_37019          I 2 I 2
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28626 13 -     87169 AAG--G--------------------AC-----------------TCA------A--C----------TT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837204 13 +   1526836 AAG--GA-------------------AA-----------------T-G------G--C----------TT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35894  8 +     51376 -----G---------------------A-----------------C-G------C--A----------TT
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            63672 13 +   2246927 AAG--GA-------------------AA-----------------G-G------G--T----------TT
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537417 13 -  12879189 ATG--GA-------------------CA-----------------T-G------G--T----------TT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630259 13 +  20541912 gag--ga-------------------aC-----------------C-G------T--T----------TT
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673435 13 +   1390856 aag--ga-------------------aa-----------------T-G------T--T----------TT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6186 11 +    198055 --G--GA-------------------AA-----------------T-G------T--T----------TT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36528 13 +     67921 AAG--GA-------------------AA-----------------T-T------C--A----------CT
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Echinops_telfairi.JH980293.1                            48780704 13 + 111700974 AAG--CA-------------------AC-----------------T-T------G--T----------TG
i Echinops_telfairi.JH980293.1                           C 0 I 12
s Eidolon_helvum.KE759718.1                                  10660 13 +     11740 aag--ga-------------------aa-----------------T-G------T--T----------TT
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1097782 13 +  10337057 aag--gg-------------------AA-----------------T-T------G--T----------TT
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          20407 13 -    110024 AAA--AA-------------------AG-----------------T-G------G--T----------TT
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                             538 13 +      8657 AAA--AA-------------------AG-----------------T-G------G--T----------TT
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16329447 13 -  41312741 aag--ga-------------------aa-----------------t-g------t--t----------tt
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2145862 13 -  14770903 aag--ga-------------------aC-----------------C-A------C--T----------TT
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1283689 13 +   4378816 aag--ga-------------------aa-----------------T-G------T--T----------TT
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18531509 13 -  39960074 aag--ga-------------------aa-----------------T-G------T--T----------TT
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               33538 13 +    498745 aag--ga-------------------aa-----------------T-G------T--T----------TT
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3328367 12 -   7059049 -----------------------------------------------AAGAAT-GGTT----------AA
i Erinaceus_europaeus.JH835339.1                         I 2 C 0
s Erythrocebus_patas.Contig38                             21205404 11 -  21539334 a----ga-------------------aa-----------------t-g------g--t----------tt
i Erythrocebus_patas.Contig38                            I 105 C 0
s Eulemur_albifrons.k141_342033                              13902 13 -     14127 AAG--GA-------------------TA-----------------A-G------G--T----------TT
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6616 13 -     16928 AAG--GA-------------------TA-----------------A-G------G--T----------TT
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15648 13 -     25546 AAG--GA-------------------TA-----------------A-G------G--T----------TT
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12844 13 +     26330 AAG--GA-------------------TA-----------------T-G------G--T----------TT
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14079 13 +     23973 aag--ga-------------------ta-----------------a-g------G--T----------TT
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12841 13 +     75513 AAG--GA-------------------TA-----------------T-G------G--T----------TT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10771 13 +     97555 aag--ga-------------------ta-----------------a-g------g--T----------TT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              262 13 +     13026 aag--ga-------------------ta-----------------a-g------g--T----------TT
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4315 13 -     17153 AAG--GA-------------------TA-----------------A-G------G--T----------TT
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13888 13 +    111500 aag--ga-------------------ta-----------------a-g------G--T----------TT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237092  3 + 206538554 ---------------------------------------------------------c----------tT
i Felis_catus.CM001381.2                                 I 2 C 0
s Felis_catus_fca126.CM031415.1                           20195935  3 + 205367284 ---------------------------------------------------------c----------tT
i Felis_catus_fca126.CM031415.1                          I 2 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  9677 14 -     36744 AAG--GA-------------------AC-----------------TCA------A--C----------TT
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             850562 13 +   3816255 aag--aa-------------------aa-----------------t-t------g--T----------GT
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg2040                                     426733 13 -    453645 AAG--GA-------------------TA-----------------T-G------G--T----------TT
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4423 13 +     11339 AAG--GA-------------------TA-----------------T-G------G--T----------TT
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            1721 13 +     41679 AAG--GA-------------------TA-----------------T-G------G--T----------GT
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1318 13 -      9135 aag--gA-------------------TA-----------------T-G------G--T----------TT
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            31485 14 +     49224 TAG--AA-------------------AA----------------GC-G------G--T----------TT
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              16207 13 -     32273 aag--ga-------------------aa-----------------t-G------G--T----------TT
i Gorilla_beringei.k141_3596273                          I 114 C 0
s Gorilla_gorilla.LT578341.1                             186338344 13 + 186649187 AAG--GA-------------------AA-----------------T-G------G--T----------TT
i Gorilla_gorilla.LT578341.1                             I 113 I 25
s Graphiurus_murinus.GraMur_scaffold_10447                   32727 13 +     78134 TAG--AA-------------------AA-----------------A-G------G--T----------TT
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6947 13 -     19426 AAG--GA-------------------TA-----------------T-G------G--T----------TT
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12096 13 -     15286 AAG--GA-------------------TA-----------------T-G------G--T----------TT
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13735 13 +     18253 AAG--GA-------------------TA-----------------T-G------G--T----------TT
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13836 13 -     41752 AAG--GA-------------------TA-----------------T-G------G--T----------TT
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13673 13 -     16460 AAG--GA-------------------TA-----------------T-G------G--T----------TT
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242459 14 +    327341 AAG--GA-------------------AC-----------------TCA------G--C----------TT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20662351 13 +  22651954 AAG--GA-------------------AA-----------------T-C------C--T----------TT
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1019 13 +      7595 AAG--AA-------------------AA-----------------T-T------G--T----------TT
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hoolock_leuconedys.ctg274                                    435006 13 +    630532 AAG--GA-------------------AA-----------------T-G------G--T----------TT
i Hoolock_leuconedys.ctg274                                 I 101 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45153 14 +     55795 AAG--AA-------------------AC-----------------TCA------G--C----------TT
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83240 13 +    135385 AAG--GC-------------------AA-----------------T-C------A--T----------TT
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7521009 13 -   7955117 aag--ga-------------------aa-----------------t-a------g--t----------tt
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   22636 13 +     31101 AAG--GA-------------------TA-----------------T-G------G--T----------TT
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8276919 13 -   9596543 AAG--GA-------------------AA-----------------C-G------G--T----------TT
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    16507 13 -     42476 AAA--GA-------------------AC-----------------T-G------C--T----------TT
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15524188 13 -  30322482 AAG--GA-------------------TA-----------------T-G------G--T----------TT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7864 13 +     64341 AAG--GA-------------------AA-----------------T-T------C--T----------TT
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                            204 13 -     35062 aag--ga-------------------aa-----------------t-t------c--t----------tt
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        7892 13 +     35603 AAG--GA-------------------AA-----------------T-T------C--T----------TT
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    29308 13 +     38576 AAG--GA-------------------AA-----------------T-T------C--T----------TT
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         26008 13 +     66356 AAG--GA-------------------AA-----------------T-T------C--T----------TT
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         11080 13 -     23766 AAG--GA-------------------TA-----------------T-G------G--T----------TT
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29141 13 +     45836 AAG--GA-------------------TA-----------------T-G------G--T----------TT
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1679 13 +     25010 AAG--GA-------------------TA-----------------T-G------G--T----------TT
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27077 13 +     54090 AAG--GA-------------------TA-----------------T-G------G--T----------TT
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3043186 13 +   3914936 aag--ga-------------------aa-----------------t-g------t--t----------tt
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6608 13 -     14121 aag--ga-------------------ag-----------------C-A------A--T----------TT
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437357 11 +   1826925 A----GA-------------------AA-----------------T-G------G--T----------TT
i Lophocebus_aterrimus.ctg367                            I 117 C 0
s Loris_lydekkerianus.k141_2539221                            5982 13 +     11245 AAT--GA-------------------TA-----------------T-G------G--T----------TT
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004802 13 +   6120653 AAT--GA-------------------TA-----------------T-G------G--T----------TT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4217452 10 -  43346337 -----CA-------------------AA-----------------C-T------G--G----------TT
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17955463 13 -  59628241 AAG--GA-------------------AA-----------------T-G------T--T----------TT
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               7168 13 +     40492 A--AGGA-------------------AG-----------------T-G------G--T----------TT
i Macaca_arctoides.k141_2326796                          I 106 C 0
s Macaca_assamensis.Contig5                               59676427 13 +  60120075 A--AGGA-------------------AG-----------------T-G------G--T----------TT
i Macaca_assamensis.Contig5                              I 106 C 0
s Macaca_cyclopis.k119_18836                                 12943 13 -     26193 a--agga-------------------ag-----------------t-g------g--t----------tt
i Macaca_cyclopis.k119_18836                             I 109 C 0
s Macaca_fascicularis.k141_814140                            80727 13 -    114318 a--agga-------------------ag-----------------t-g------g--t----------tt
i Macaca_fascicularis.k141_814140                        I 109 C 0
s Macaca_fuscata.k119_255327                                  6414 13 -     23192 a--agga-------------------ag-----------------t-g------g--t----------tt
i Macaca_fuscata.k119_255327                             I 105 C 0
s Macaca_leonina.k141_3550399                                15887 13 -     29190 a--agga-------------------ag-----------------t-g------g--t----------tt
i Macaca_leonina.k141_3550399                            I 109 C 0
s Macaca_maura.k141_2733130                                  24452 13 +     37952 A--AGGA-------------------AG-----------------T-G------G--T----------TT
i Macaca_maura.k141_2733130                              I 109 C 0
s Macaca_mulatta.NC_041758.1                             186839541 13 + 187317192 a--aggA-------------------AG-----------------T-G------G--T----------TT
i Macaca_mulatta.NC_041758.1                             I 109 C 0
s Macaca_nemestrina.KQ007038.1                            25458104 13 -  25927173 A--AGGA-------------------AA-----------------T-G------G--T----------TT
i Macaca_nemestrina.KQ007038.1                           I 109 C 0
s Macaca_nigra.k141_1655396                                  80300 13 +     89720 A--AGGA-------------------AG-----------------T-G------G--T----------TT
i Macaca_nigra.k141_1655396                              I 109 C 0
s Macaca_radiata.k141_3680011                                 7301 13 +     20474 A--AGGA-------------------AG-----------------T-G------G--T----------TT
i Macaca_radiata.k141_3680011                            I 109 C 0
s Macaca_siberu.k141_635500                                   7101 13 -     14993 a--agga-------------------ag-----------------t-g------g--t----------tt
i Macaca_siberu.k141_635500                              I 109 C 0
s Macaca_silenus.Contig273                                  329967 13 -    668171 a--agga-------------------ag-----------------t-g------g--t----------tt
i Macaca_silenus.Contig273                               I 109 C 0
s Macaca_thibetana.k99_256239                                 5414 13 -     24072 a--agga-------------------Ag-----------------t-g------g--t----------tt
i Macaca_thibetana.k99_256239                            I 106 C 0
s Macaca_tonkeana.k141_1498238                               26039 13 -     45290 a--agga-------------------ag-----------------t-g------g--t----------tt
i Macaca_tonkeana.k141_1498238                           I 109 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90753 13 +     94391 AAG--GA-------------------AA-----------------T-G------T--T----------TT
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23937632 11 -  24302211 a----ga-------------------aa-----------------t-g------g--t----------tt
i Mandrillus_leucophaeus.scaffold280                     I 115 C 0
s Mandrillus_sphinx.Contig270                               351756 11 +    752769 A----GA-------------------AA-----------------T-G------G--T----------TT
i Mandrillus_sphinx.Contig270                            I 115 C 0
s Manis_javanica.JSZB01003497.1                              18637 13 +    737560 aag--gt-------------------aa-----------------a-g------T--T----------TT
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              50630 13 -    317179 aag--at-------------------aa-----------------a-G------T--T----------TT
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33103209 13 -  40650429 aag--ga-------------------aa-----------------t-a------g--t----------TT
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        10468 13 -    207569 AAG--GA-------------------AA-----------------T-G------T--T----------TT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 3
s Mellivora_capensis.MelCap_flattened_line_69365             10184 13 +     13704 AAG--GA-------------------AA-----------------T-G------T--T----------TT
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 32854 13 +    140813 AAG--AA-------------------AA-----------------T-G------G--T----------TT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12182348 13 -  29670104 AAG--GA-------------------AA-----------------T-G------G--T----------TT
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                6099 13 -      7380 aag--ga-------------------aa-----------------t-t------c--t----------tt
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_2457295                                328 13 +      1079 AAG--GA-------------------AA-----------------T-T------C--T----------TT
i Mico_humeralifer.k141_2457295                          C 0 C 0
s Mico_schneideri.k141_1950671                                      6111 13 -      7356 aag--ga-------------------aa-----------------t-t------c--t----------tt
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18291613 13 -  93316391 AAG--GA-------------------TA-----------------T-G------G--T----------TT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    22453 13 -    145209 AAG--CA-------------------AA-----------------T-G------A--T----------TT
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                15786 13 -     19307 GAG--GA-------------------AC-----------------C-G------T--T----------TT
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11260586 13 -  27267610 AAG--GA-------------------AG-----------------T-G------G--T----------TT
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850748 13 +   8254450 aag--ga-------------------aC-----------------A-G------T--T----------TT
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34429 13 +     64694 AAG--GA-------------------AC-----------------A-G------T--T----------TT
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9336 13 -     28506 a--agga-------------------aa-----------------t-g------g--t----------tt
i Miopithecus_ogouensis.k141_534055                      I 106 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6054 13 -      8324 AAG--GA-------------------AA-----------------T-G------T--T----------TT
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      9158 13 -     37649 AAG--GA-------------------TA-----------------T-G------G--T----------TT
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141758 14 -    366855 AAG--AA-------------------GT-----------------C-G------T--TT---------TT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35559 14 +     37127 AAG--GA-------------------AT-----------------TCA------A--C----------TT
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           6958 13 +     14753 AAG--GA-------------------AC-----------------T-G------C--T----------TT
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84361468 13 - 120012414 aag--ga-------------------aa-----------------t-g------g--t----------tT
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87650466 13 - 129401213 aag--ga-------------------aa-----------------t-g------g--T----------TT
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31355125 13 -  89631738 AAG--GA-------------------AA-----------------T-G------G--T----------TT
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90752527 13 - 130317789 aag--ga-------------------aa-----------------t-g------g--t----------TT
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              5066 13 +     14296 TAG--AA-------------------AA-----------------T-G------T--T----------TT
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               301597 13 -  14710649 aag--aa-------------------aa-----------------t-g------t--t----------tt
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71373 13 -     80779 ACG--AA-------------------AG-----------------T-G------C--A----------TT
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                280601 13 -  10118263 aag--ga-------------------aC-----------------C-G------C--T----------TT
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1587866 13 -   6019432 aag--ga-------------------aC-----------------C-G------C--T----------TT
i Myotis_davidii.KB100139.1                              C 0 I 6
s Myotis_lucifugus.GL429869.1                              3903955 13 -   4330536 aag--ga-------------------aC-----------------C-G------C--T----------TT
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                         104 13 +      1835 AAG--GA-------------------AC-----------------C-G------C--T----------TT
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189396 13 +    196477 AAG--GA-------------------AA-----------------T-G------G--T----------TT
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 I 5
s Nannospalax_galili.KL204047.1                            2034189 10 -   3037898 aag--ga-------------------aa-----------------t-a------g---------------
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               15338 13 +     21681 AAG--GA-------------------AA-----------------T-G------G--T----------TT
i Nasalis_larvatus.k141_413338                           I 113 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20307640 13 +  31847680 aag--ga-------------------aa-----------------t-g------t--t----------tt
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149531 13 -   9404916 aag--ga-------------------aa-----------------t-g------t--t----------TT
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102586346 13 - 196305487 AAT--GA-------------------TA-----------------T-G------G--T----------TT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              270 13 +      2075 aat--ga-------------------TA-----------------T-G------G--T----------TT
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761700 13 + 199412804 AAT--GA-------------------TA-----------------T-G------G--T----------TT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1363672 12 +   3988456 aag--ga-------------------aa-----------------t-g------g--c----------t-
i Ochotona_princeps.JH802162.1                           C 0 I 1
s Octodon_degus.JH651603.1                                  746983 10 +  11899542 -----AG-------------------AG-----------------T-A------C--A----------TT
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                              506785 13 -   2017862 aag--ga-------------------aa-----------------t-g------t--t----------tt
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   25254 13 +     28053 AAG--GA-------------------AA-----------------T-G------G--T----------TT
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    80254 13 +    102263 AAG--GA-------------------AA-----------------T-T------G--T----------TT
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9972 13 -     18566 AAG--GA-------------------AA-----------------T-T------G--T----------TT
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147468 13 + 174332312 AAG--GA-------------------AA-----------------C-A------G--T----------TT
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462479 13 -    559221 aag--ga-------------------aa-----------------t-g------t--T----------TT
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4253 13 +      8798 AAG--GA-------------------TA-----------------T-G------G--T----------TT
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696416 13 -   1103335 AAG--GA-------------------TA-----------------T-G------G--T----------TT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    44295 13 +     80009 AAG--GA-------------------AA-----------------T-G------G--T----------TT
i Pan_paniscus.KQ411613.1                                I 113 C 0
s Pan_troglodytes.CM009242.2                             189143197 13 + 189151597 AAG--GA-------------------AA-----------------T-G------G--T----------TT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  151290 14 +    230217 AAG--GA-------------------AC-----------------TCA------A--C----------TT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                264499 14 +  18783137 aag--ga-------------------aC-----------------TCA------A--C----------TT
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4721378 14 -   8748460 aag--ga-------------------aC-----------------TCA------A--C----------TT
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183443434 11 + 183742232 A----GA-------------------AA-----------------T-G------G--T----------TT
i Papio_anubis.CM001495.2                                I 115 C 0
s Papio_cynocephalus.k141_4307930                             7080 11 +     20448 A----GA-------------------AA-----------------T-G------G--T----------TT
i Papio_cynocephalus.k141_4307930                        I 115 C 0
s Papio_hamadryas.Contig39                                20563892 11 +  20919399 A----GA-------------------AA-----------------T-G------G--T----------TT
i Papio_hamadryas.Contig39                               I 115 C 0
s Papio_kindae.k141_1936966                                   5824 11 +     41871 A----GA-------------------AA-----------------T-G------G--T----------TT
i Papio_kindae.k141_1936966                              I 115 C 0
s Papio_papio.k141_802527                                     9117 11 +     27711 A----GA-------------------AA-----------------T-G------G--T----------TT
i Papio_papio.k141_802527                                I 115 C 0
s Papio_ursinus.k141_3428135                                  9186 11 +      9205 A----GA-------------------AA-----------------T-G------G--T----------TT
i Papio_ursinus.k141_3428135                             I 115 n 115
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12789 14 -     78924 AAG--GA-------------------AC-----------------TCA------A--C----------TT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10233  9 +     13100 ------A-------------------TA-----------------T-G------G--T----------TT
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8639  9 +     25941 ------A-------------------TA-----------------T-G------G--T----------TT
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18194880 13 -  18517816 AAG--GA-------------------AA-----------------T-A------G--T----------TT
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28252 13 -     29689 AAG--GA-------------------AA-----------------T-C------A--T----------TT
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Piliocolobus_badius.k141_1234363                           43829 13 +     62158 aag--ga-------------------aa-----------------T-G------G--T----------TT
i Piliocolobus_badius.k141_1234363                       I 109 C 0
s Piliocolobus_gordonorum.k141_381342                        38576 13 +     89929 AAG--GA-------------------AA-----------------T-G------G--T----------TT
i Piliocolobus_gordonorum.k141_381342                    I 109 C 0
s Piliocolobus_kirkii.k141_448987                            39992 13 +     51399 AAG--GA-------------------AA-----------------T-G------G--T----------TT
i Piliocolobus_kirkii.k141_448987                        I 109 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296230 13 -  14605196 AAG--GA-------------------AA-----------------T-G------G--T----------TT
i Piliocolobus_tephrosceles.PDMG02000141.1               I 109 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1896 13 +     22620 AAG--GA-------------------AC-----------------C-A------C--T----------TT
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189131333 13 + 189387572 AAG--GA-------------------AA-----------------T-G------G--T----------TT
i Pongo_abelii.CM009266.2                                I 109 C 0
s Pongo_pygmaeus.ctg66                                     9570940 13 +   9816681 AAG--GA-------------------AA-----------------T-G------G--T----------TT
i Pongo_pygmaeus.ctg66                                   I 108 C 0
s Presbytis_comata.k141_677006                               73514 13 -     81375 aag--ga-------------------aa-----------------t-g------g--t----------tt
i Presbytis_comata.k141_677006                           I 113 C 0
s Presbytis_mitrata.k141_1087752                              5334 13 +     19060 AAG--GA-------------------AA-----------------T-G------G--T----------TT
i Presbytis_mitrata.k141_1087752                         I 113 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 13474 13 -     22811 AAG--AA-------------------AA-----------------T-T------G--T----------TT
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2596868 13 -   4620579 AAG--GA-------------------TA-----------------T-G------G--T----------TT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990854 13 +   2598838 AAG--GA-------------------TA-----------------T-G------G--G----------TT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29166 13 +     38485 AAG--GA-------------------TA-----------------T-G------G--G----------TT
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1209 13 -     13098 AAG--GA-------------------TA-----------------T-G------G--T----------TT
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26687 13 +     35766 AAG--GA-------------------TA-----------------T-G------G--T----------TT
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4874 13 -     24134 AAG--GA-------------------TA-----------------T-G------G--T----------TT
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28699 13 -     67325 AAG--GA-------------------TA-----------------T-G------G--T----------TT
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4922 13 -      6182 AAG--GA-------------------TA-----------------T-G------G--G----------TT
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            10498 13 -     21651 AAG--AA-------------------AA-----------------T-G------G--T----------TG
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            15213 14 -     21811 aag--ga-------------------aT-----------------C-G------T--TT---------TT
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40374 13 +     42204 AAG--GA-------------------AA-----------------T-G------T--T----------TT
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22976919 13 +  28871421 AAG--GA-------------------AA-----------------T-G------T--T----------TT
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                6972 13 -      8028 AAG--GA-------------------AA-----------------T-G------T--T----------TT
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20274446 14 -  38429054 aag--ga-------------------ac-----------------tCA------A--A----------TT
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15347 13 -     91421 aag--ga-------------------aa-----------------c-g------g--t----------tt
i Pygathrix_cinerea.k141_1153803                         I 113 C 0
s Pygathrix_nigripes_b.ctg100                                 7609467 13 +   7812017 AAG--GA-------------------AA-----------------C-G------G--T----------TT
i Pygathrix_nigripes_b.ctg100                               I 113 C 0
s Pygathrix_nigripes_a.k141_215492                             15319 13 -     72585 aag--ga-------------------aa-----------------c-g------g--t----------tt
i Pygathrix_nigripes_a.k141_215492                         I 113 C 0
s Rattus_norvegicus.chr16                                 53570728 13 +  90668790 AAG--GT-------------------AA-----------------T-G------G--T----------TT
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             7030 13 -     11128 aag--ga-------------------aa-----------------t-g------g--t----------tt
i Rhinopithecus_bieti.k119_217274                        I 111 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236379 13 - 195417433 AAG--GA-------------------AA-----------------T-G------G--T----------TT
i Rhinopithecus_roxellana.NC_044550.1                    I 113 C 0
s Rhinopithecus_strykeri.ctg102                            7672035 13 +   7961872 AAG--GA-------------------AA-----------------T-G------G--T----------TT
i Rhinopithecus_strykeri.ctg102                          I 111 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87941 13 -     96226 AAA--GA-------------------AA-----------------T-G------T--T----------TT
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_8081                                   480 13 +     42994 AAG--GA-------------------AA-----------------T-T------C--T----------TT
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_57697                                265 13 +      1030 AAG--GA-------------------AA-----------------T-T------C--T----------TT
i Saguinus_imperator.k141_57697                          C 0 C 0
s Saguinus_inustus.k141_3945547                                344 13 -      8737 aag--ga-------------------aa-----------------t-t------c--t----------tt
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_midas.LG03                                    209469831 13 + 209938924 AAG--TA-------------------AA-----------------T-G------C--T----------TT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 8466 13 -      9399 aag--ga-------------------aa-----------------t-t------c--t----------tt
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951204 13 - 121099817 AAG--GA-------------------AA-----------------T-T------C--T----------TC
i Saimiri_boliviensis.NW_024100920.1                     I 292 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23543 13 +     46362 AAG--GA-------------------AA-----------------T-T------C--T----------TC
i Saimiri_cassiquiarensis.k141_2188234                   I 175 C 0
s Saimiri_macrodon.k141_716185                               23638 13 +     45824 AAG--GA-------------------AA-----------------T-T------C--T----------TC
i Saimiri_macrodon.k141_716185                           I 175 C 0
s Saimiri_oerstedii.k141_1487881                             40317 13 -     64574 aag--ga-------------------aa-----------------t-t------c--t----------tc
i Saimiri_oerstedii.k141_1487881                         I 226 C 0
s Saimiri_sciureus.k141_2278166                               3389 13 -     23631 aag--ga-------------------aa-----------------t-t------c--t----------tc
i Saimiri_sciureus.k141_2278166                          I 292 C 0
s Saimiri_ustus.k141_1484609                                 23534 13 -     61129 aag--ga-------------------aa-----------------t-t------c--t----------tC
i Saimiri_ustus.k141_1484609                             I 175 C 0
s Sapajus_apella.ctg103                                    5420912 13 -   5703754 aag--ga-------------------aa-----------------t-t------c--t----------tt
i Sapajus_apella.ctg103                                  I 115 C 0
s Sapajus_macrocephalus.k141_351809                          56153 13 -     80660 aag--ga-------------------aa-----------------t-t------c--t----------tt
i Sapajus_macrocephalus.k141_351809                      I 313 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153341 13 -    313613 AAA--GA-------------------AA-----------------G-A------G--T----------TT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                          211 13 -     12572 AAG--GA-------------------AA-----------------T-G------G--T----------TT
i Semnopithecus_entellus.k141_1672505                    I 1 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27061 13 +     39453 AAG--GA-------------------AA-----------------T-G------G--T----------TT
i Semnopithecus_hypoleucos.k141_1615806                  I 113 C 0
s Semnopithecus_johnii.k141_670120                            7579 13 +     27826 AAG--GA-------------------AA-----------------T-G------G--T----------TT
i Semnopithecus_johnii.k141_670120                       I 112 C 0
s Semnopithecus_priam.k141_638794                             7101 13 -     19483 aag--ga-------------------aa-----------------t-g------g--t----------tt
i Semnopithecus_priam.k141_638794                        I 113 C 0
s Semnopithecus_schistaceus.k141_1572284                       402 13 -     12762 AAG--GA-------------------AA-----------------T-G------G--T----------TT
i Semnopithecus_schistaceus.k141_1572284                 I 107 C 0
s Semnopithecus_vetulus.k141_910252                            263 13 +     13763 AAG--GA-------------------AA-----------------T-G------G--T----------TT
i Semnopithecus_vetulus.k141_910252                      I 112 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                      426 13 -     30804 AAG--AA-------------------AA-----------------T-G------A--T----------TT
i Sigmodon_hispidus.SigHis_scaffold_42075                I 5 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               3892 30 +   1910179 --G--GAAATATACCAAAATAGGGAAAA-----------------G-A------T--T----------TT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13651161  7 -  18376816 -----------------------------------------------GA-AATGG---------------
i Sorex_araneus.JH798187.1                               I 3 I 2
s Spermophilus_dauricus.KZ294078.1                         1954064 13 -   3870691 aag--ga-------------------aa-----------------t-a------g--t----------TT
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30872 13 +     97271 AAG--GA-------------------AA-----------------T-G------T--T----------TT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              18462 14 -    196729 AAG--GA-------------------AC-----------------TCA------A--C----------TT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6810945 13 +  69701581 agg--aa-------------------aA-----------------T-G------T--T----------TC
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                10938 23 +     41958 AAG--GA-------------------AC-----------------C-G------T--TTGTTTGTTTTTT
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72757 13 +    116680 AAG--GA-------------------AA-----------------T-G------G--T----------TT
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 I 5
s Tapirus_indicus.TapInd_scaffold_9301                      118902 13 -    156842 AAG--TA-------------------AA-----------------T-G------T--T----------TT
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387359 13 +    539355 AAG--TA-------------------AA-----------------T-G------T--T----------TT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               26608 13 +     70052 AAG--AA-------------------AA-----------------T-G------G--T----------TT
i Tarsius_lariang.k141_2201908                           I 110 C 0
s Tarsius_wallacei.k141_254427                                1405 13 -     16117 aag--aa-------------------aa-----------------t-g------g--t----------tt
i Tarsius_wallacei.k141_254427                           I 110 C 0
s Theropithecus_gelada.CM009954.1                        186428752 11 + 186847797 A----GA-------------------AA-----------------T-G------G--T----------TT
i Theropithecus_gelada.CM009954.1                        I 115 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105573 13 +    114563 AAG--GA-------------------AC-----------------T-T------G--T----------TT
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   6541 13 +      8208 AAG--GA-------------------AA-----------------T-G------G--T----------TT
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81332 13 +    610378 GAG--AA-------------------AC-----------------C-A------T--T----------TT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         11152 13 -     20410 aag--ga-------------------aa-----------------t-g------g--t----------tt
i Trachypithecus_auratus.k141_722599                     I 113 C 0
s Trachypithecus_crepusculus.k141_582567                       266 13 -     12674 aag--ga-------------------aa-----------------t-g------g--t----------tt
i Trachypithecus_crepusculus.k141_582567                 I 113 C 0
s Trachypithecus_cristatus.k141_580354                       11253 13 +     19930 AAG--GA-------------------AA-----------------T-G------G--T----------TT
i Trachypithecus_cristatus.k141_580354                   I 113 C 0
s Trachypithecus_francoisi.k141_1412647                       7664 13 -     19997 aag--gg-------------------aa-----------------t-g------g--t----------tt
i Trachypithecus_francoisi.k141_1412647                  I 113 C 0
s Trachypithecus_geei.k141_277701                            47803 13 -     60166 aag--ga-------------------aa-----------------t-g------g--t----------tt
i Trachypithecus_geei.k141_277701                        I 113 C 0
s Trachypithecus_germaini.k141_912491                        15275 13 -     27529 aag--ga-------------------aa-----------------t-g------g--t----------tt
i Trachypithecus_germaini.k141_912491                    I 113 C 0
s Trachypithecus_hatinhensis.k141_143409                     15219 13 -     18194 aag--ga-------------------aa-----------------t-g------g--t----------tt
i Trachypithecus_hatinhensis.k141_143409                 I 113 C 0
s Trachypithecus_laotum.k141_907409                           8931 13 -     21137 aag--gg-------------------aa-----------------t-g------g--t----------tt
i Trachypithecus_laotum.k141_907409                      I 113 C 0
s Trachypithecus_leucocephalus.k141_587342                    7634 13 -     10723 aag--gg-------------------aa-----------------t-g------g--t----------tt
i Trachypithecus_leucocephalus.k141_587342               I 113 C 0
s Trachypithecus_melamera.k141_434728                         6806 13 +      9834 AAG--GA-------------------AA-----------------T-G------G--T----------TT
i Trachypithecus_melamera.k141_434728                    I 113 C 0
s Trachypithecus_obscurus.k141_190785                        25119 13 +     32220 AAG--GA-------------------AA-----------------T-G------G--T----------TT
i Trachypithecus_obscurus.k141_190785                    I 113 C 0
s Trachypithecus_phayrei.ctg124                            5939221 13 +   6242583 AAG--GA-------------------AA-----------------T-G------G--T----------TT
i Trachypithecus_phayrei.ctg124                          I 113 C 0
s Trachypithecus_pileatus.k141_2007326                        8472 13 +     20839 AAG--GA-------------------AA-----------------T-G------G--T----------TT
i Trachypithecus_pileatus.k141_2007326                   I 113 C 0
s Trichechus_manatus.JH594705.1                            4293373 13 +  10818551 AAG--GA-------------------AA-----------------T-T------G--T----------TT
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2155715 13 +   4065304 ACG--GA-------------------AA-----------------T-G------G--T----------TA
i Tupaia_chinensis.KB320699.1                            C 0 I 215
s Tupaia_tana.TupTan_flattened_line_97126                     9368 13 -     10553 AAG--GA-------------------AA-----------------T-G------G--T----------TA
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   53441  4 -     77625 ------------------------------------------------------G--T----------TT
i Uropsilus_gracilis.UroGra_scaffold_12083               I 3 C 0
s Ursus_maritimus.KK499267.1                               4850574 13 -   5085361 aag--ga-------------------aa-----------------t-g------t--t----------tt
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  11533 13 +     50397 AAG--GA-------------------TA-----------------T-G------G--T----------TT
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11592 13 +     24756 AAG--GA-------------------TA-----------------T-G------G--T----------TT
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5372026 13 -   5488506 ATG--GA-------------------AA-----------------T-G------T--T----------TC
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10927 13 -     43706 AAG--GA-------------------AA-----------------T-G------T--T----------TT
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          1192 13 +    224448 AAG--GA-------------------AA-----------------T-A------G--T----------TT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          5503 13 +     86975 aag--ga-------------------aa-----------------T-G------T--T----------TT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      15015 13 +     63895 AAG--GA-------------------AA-----------------T-G------G--C----------TT
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Saguinus_labiatus.k141_285685                               8505  5 +      8564 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6965 25 +     62944 g-ctc-taG---------------TGGA------A-------------A-----A-A----TATGGCCGCA
s Acinonyx_jubatus.LLWD01001279.1                           827453 26 -   1699592 T-TTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTGTA
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     70930 13 +     87051 ------------------------------------------------A-----A-A----TCGTGCTACA
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 11 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510726 26 -  29979442 g-CTCCAAG---------------TGGA------A-------------A-----A-A----CACTACTGTG
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             79502 26 -    347723 a-CTCCAAG---------------TGGA------A-------------A-----A-A----CAGTGCTGTA
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     74631 26 -     89534 G-CTCCAAA---------------TGGA------A-------------A-----A-A----TACTGCTACA
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14895 25 -     52922 g-ctc-aag---------------tgga------a-------------a-----a-a----tatggcccca
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         14808 25 -     28001 g-ctc-gag---------------tgga------a-------------a-----a-a----TTTAGCCCCA
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          5306 25 -     18505 g-ctc-gag---------------tgga------a-------------a-----a-a----ttTAGCCCCA
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           6158 25 -     12518 g-ctc-gag---------------tgga------a-------------a-----a-a----TTTAGCCCCA
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              7751 25 +     51355 G-CTT-GAT---------------GGCA------A-------------A-----A-A----TGTGGCTGCA
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                 860 25 -     36483 g-ctt-gat---------------ggca------a-------------a-----a-a----TGTGGCTGCA
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              11309 25 +     28687 G-CTT-GAT---------------GGCA------A-------------A-----A-A----TGTGGCTGCA
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1509701                                25136 25 +     25266 G-CTT-GAT---------------GGCA------A-------------A-----A-A----TGTGGCTGCA
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_918386                             857 25 -      9457 g-ctt-gat---------------ggca------a-------------a-----a-a----TGTGGCTGCA
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_3472759                            18443 25 -     18578 g-ctt-gat---------------ggca------a-------------a-----a-a----TGTGGCTGCA
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              3827 25 +     47717 G-CTT-GAT---------------GGCA------A-------------A-----A-A----TGTGGCTGCA
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                               539 25 +      5663 G-CTT-GAT---------------GGCA------A-------------A-----A-A----TGTGGCTGCA
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             14991 25 +     50774 G-CTT-GAT---------------GGCA------A-------------A-----A-A----TGTGGCTGCA
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185498 26 +    412891 G-CTCCAAG---------------TGCA------G-------------A-----A-A----TACTGCTGCA
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  15753 25 -     33861 g-ctt-aag---------------tgca------a-------------a-----a-a----tatGGCTGCA
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            15797 25 -     34016 g-ctt-aag---------------tgca------a-------------a-----a-a----tATGGCTGCA
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4298177 25 -   5030052 G-CTT-AAG---------------TGCA------A-------------A-----A-A----TATGGCTGCA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             15786 25 -     34685 g-ctt-aag---------------tgca------a-------------a-----a-a----tATGGCTGCA
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28911 25 -     47192 g-ctt-aag---------------tgca------a-------------a-----a-a----TATGGCTGCA
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      12750 27 +     20879 A-TTTCAAG---------------TGGA------AA------------A-----A-A----TACTGCCACA
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       11598 27 +     14667 G-CTCCAAG---------------AAGA------A-------------A-----AAA----TACTGCTGTA
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4906 26 +     43469 G-CTCCAAG---------------TGCA------G-------------A-----A-A----TAGTGCTGCA
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  53833 26 -     92717 G-CTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTTCA
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54455 26 +     85213 G-CTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTTCA
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             5598 25 -     10423 g-ctt-aag---------------tACA------A-------------A-----A-A----TATGGCTGCA
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             25067 25 +     31915 G-CTT-AAG---------------TGCA------A-------------A-----A-A----TATGGCTGCA
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590752 25 - 189096842 g-ctt-aag---------------tgca------a-------------a-----a-a----taTGGCTGCA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                               151 25 -     12329 G-CTT-AAG---------------TGCA------A-------------A-----A-A----TATGGCTGCA
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002539 26 -  17673402 C-ACCCAAG---------------TGAA------A-------------A-----A-A----TACTGCTGCA
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2334997 26 -   7040546 C-ACCCAAG---------------TGAA------A-------------A-----A-A----TACTGCTGCA
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  403281 26 -   1652518 C-ACCCAAG---------------TGAA------A-------------A-----A-A----TACTGCTGCA
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17799317 26 -  60362399 G-TTCCAAG---------------TGGA------A-------------A-----A-A----CATTGCTGTA
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                       65 26 -     43241 G-TTCCAAG---------------TGGA------A-------------A-----A-A----CATTGCTGTA
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034760 26 -   9314153 G-TTCCAAG---------------TGGA------A-------------A-----A-A----CATTGCTGTA
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17959236 26 -  59632846 G-TTCCAAG---------------TGGA------A-------------A-----A-A----CATTGCTGTA
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18500537 26 +  63665305 G-TTCCAAG---------------TGGA------A-------------A-----A-A----CATTGCTGTA
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1199 28 -     12242 G-CTCTTAG---------------AGGA------AAA-----------A-----A-A----TACTACTATG
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           156130 26 -    496798 G-CTCGGAG---------------TGGA------A-------------A-----A-T----TTTGACTGCA
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5255 26 -     11696 G-CTCCAAG---------------TGCA------G-------------A-----A-A----TACTGGGGCA
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137218 26 +    179628 T-CTCAGAG---------------TAGA------A-------------A-----T-A----CACCACTACA
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     93210 26 +    217609 A-ACCCAAG---------------TGAA------A-------------A-----A-A----TACTGGTGCA
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                         10233 25 -     11392 g-ctt-aag---------------tgca------a-------------a-----a-A----TATGGCTGCA
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               6301 25 -      7577 g-ctt-aag---------------tgCA------A-------------A-----A-A----TATGGCTGCA
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25652970 25 +  26074798 g-ctt-aag---------------tgca------a-------------a-----a-a----tatggctgca
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                 908 25 +     28840 G-CTT-AAG---------------TGCA------A-------------A-----A-A----TATGGCTGCA
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                  633 25 +     14051 G-CTT-AAG---------------TGCA------A-------------A-----A-A----TATGGCTGCA
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         5628 26 +     31688 G-CTCGGAG---------------TGGA------A-------------A-----A-T----TTTGACTGCA
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12231597 26 +  27778364 G-CTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTGCA
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2624 26 -     25243 G-CTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTGCA
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4475823 25 +   4669795 G-CTC-GAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                         327 25 +     17872 G-CTC-GAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                            984 25 -     14043 g-ctc-gag---------------tgga------a-------------a-----a-a----tatgGCCCCA
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9017 25 +     27781 G-CTC-GAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         9183 25 -     20310 g-ctc-aag---------------tgga------a-------------a-----a-a----tatGGCCCCA
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          12163 25 +     29689 G-CTC-AAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            6914 25 -     20078 g-ctc-gag---------------tgga------a-------------a-----a-a----tatgGCCCCA
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          14831 25 -     27936 g-ctc-aag---------------tgga------a-------------a-----a-a----tatggctCCA
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            3701 25 -     17152 g-ctc-aag---------------tgga------a-------------a-----a-a----taTGGCCCCA
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38817242 25 +  39242232 G-CTC-AAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222932 25 -  21565898 g-ctc-aag---------------tgga------a-------------a-----a-a----tatggCCCCA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40050 25 -     53127 g-ctc-aag---------------tgga------a-------------a-----a-a----tatggCCCCA
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                         301 25 +     13442 G-CTC-GAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14850 25 -     27947 g-ctc-aag---------------tgga------a-------------a-----a-a----tatggcCCCA
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         14826 25 +     17596 G-CTC-AAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                           873 25 +     14005 G-CTC-GAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             678 26 -      8501 G-CTCCAAG---------------AGGA------A-------------A-----A-A----TGCTGGTGCA
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             21203 26 -     52598 G-CTCCAAG---------------TGAA------A-------------A-----A-T----TACTGCTACA
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16568 26 +     57038 G-CTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTACA
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1252947 26 +   2543920 G-CTGCAAG---------------TGGA------A-------------A-----A-A----TACTACCACA
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2206961                            499 25 -     15524 g-ctt-aag---------------tgca------a-------------a-----a-a----tATGGCTGCG
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18428810 25 -  18827391 g-ctc-gag---------------tgga------a-------------a-----a-a----tttagccCCA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15247 25 -     50209 g-ctc-gag---------------tgga------a-------------a-----a-a----tttagCCCCA
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422247 25 + 135778131 G-CTC-GAG---------------TGGA------A-------------A-----A-A----TTTAGCCCCA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 18458 26 +     19366 G-CTCCAAG---------------TGGA------G-------------A-----A-A----TATTGACGCA
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            173535 26 +    839153 G-CTCCAAG---------------TGGA------G-------------A-----A-A----TATTGACGCA
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1910760 25 +   2368649 G-CTC-GAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949012 25 + 200372422 G-CTC-GAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37294 25 +     84244 G-CTC-GAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17548235 26 -  53390261 G-TTCCGAG---------------TGGA------A-------------A-----A-A----TACTGCAGCA
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14559 17 -     20389 -------------------------GGA------A-------------A-----A-A----TACAGCTGCA
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 3 I 1
s Cricetomys_gambianus.CriGam_scaffold_18520                 50327 32 +     63868 G-TTCCAAA---------------TGGAAGAAAAA-------------A-----A-A----TAGTGCTACA
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11667686 26 + 224834208 G-TTCCAAA---------------CGGA------G-------------A-----A-A----TAGTGCTACA
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               3136 40 -     19598 A-AGCTAAGAAAATTAATTGGCTATAG-------A-------------A-----A-A----TATGACTACA
i Crocidura_indochinensis.CroInd_scaffold_37019          I 2 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28639 26 -     87169 T-TTCCAAG---------------TGGA------A-------------A-----C-A----TACTGCTATA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837217 26 +   1526836 G-TTTCAGG---------------TGGG------A-------------A-----A-A----TACCGCTACA
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35902 27 +     51376 G-TTCTAAG---------------TGGA------AA------------A-----A-A----TACTACTACA
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            63685 26 +   2246927 G-CTCCAAG---------------AGGA------A-------------A-----A-A----TGCTGTTGCA
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537430 26 -  12879189 G-CTCCAAG---------------TGGA------A-------------A-----A-A----CACTGCTTCA
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630272 26 +  20541912 G-CTCCAAG---------------TGCA------G-------------A-----A-A----TACCGCTGCA
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673448 26 +   1390856 G-CTCCAAA---------------TGGA------A-------------A-----A-A----TACTGCTGCA
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6197 26 +    198055 G-CTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTGCA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36541 26 +     67921 G-CTGCAAG---------------TGGA------A-------------A-----A-A----TACTACCACA
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Echinops_telfairi.JH980293.1                            48780729 11 + 111700974 --------------------------------------------------------A----CAGTGCTGCA
i Echinops_telfairi.JH980293.1                           I 12 C 0
s Eidolon_helvum.KE759718.1                                  10673 26 +     11740 G-CTCCAAG---------------TAGA------A-------------A-----A-A----TACTGCTGCA
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1097795 25 +  10337057 G-CTTCAAA---------------TG-A------A-------------A-----A-G----TACTGCTGCA
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          20420 26 -    110024 G-ATCCAAA---------------TGGA------A-------------A-----A-A----TAGTGGTACA
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                             551 26 +      8657 G-ATCCAAA---------------TGGA------A-------------A-----A-A----TAGTGGTACA
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16329460 26 -  41312741 g-CTCCAAG---------------TGGA------A-------------A-----A-A----CACTGCTGTA
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2145875 26 -  14770903 G-CTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTGCA
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1283702 26 +   4378816 G-CTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTGCA
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18531522 26 -  39960074 G-CTCCAAG---------------TGGA------G-------------A-----A-A----TACTGCTGCA
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               33551 26 +    498745 G-CTCCAAG---------------TGGA------G-------------A-----A-A----TACTGCTGCA
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3328379 24 -   7059049 G-TTTCAAG---------------TGGA------A-------------A-----A-A----CACT--TGCA
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21205415 25 -  21539334 g-ctc-gag---------------tgga------a-------------a-----a-a----tatggcccca
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13915 26 -     14127 G-CTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTTCA
i Eulemur_albifrons.k141_342033                          C 0 C 0
s Eulemur_collaris.k141_377015                                6629 26 -     16928 G-CTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTTCA
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15661 26 -     25546 G-CTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTTCA
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12857 26 +     26330 G-CTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTTCA
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14092 26 +     23973 G-CTCCAAG---------------TGAA------A-------------A-----A-A----TACTGCTTCA
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12854 26 +     75513 G-CTCCAGG---------------TGGA------A-------------A-----A-A----TACTGCTTCA
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10784 26 +     97555 G-CTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTTCA
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              275 26 +     13026 G-CTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTTCA
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4328 26 -     17153 G-CTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTTCA
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13901 26 +    111500 G-CTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTTCA
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237095 26 + 206538554 T-TTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTGTA
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195938 26 + 205367284 T-TTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTGTA
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  9691 26 -     36744 T-TTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTGTA
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             850575 26 +   3816255 G-TTGCAAG---------------TGGA------A-------------A-----A-A----TAGCACTACA
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg2040                                     426746 27 -    453645 G-TTCCAAG---------------CAAA------G-------------G-----AAA----TACTGCTATA
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4436 27 +     11339 G-TTCCAAG---------------CAAA------A-------------G-----AAA----TACTGCTATA
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            1734 27 +     41679 G-TTCCAAG---------------CAGA------A-------------G-----AAA----TGCTGCTATA
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1331 25 -      9135 G-CTCTGAA---------------TGAA------G-------------A-----A-A----TACCA-TGCA
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            31499 26 +     49224 G-TTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTACA
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              16220 25 -     32273 G-CTC-TAG---------------TGGA------A-------------A-----A-A----TATGGCCGCA
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578336.1                              33187822 25 -  33314783 G-CTC-TAG---------------TGGA------A-------------A-----A-A----TATGGCCGCA
i Gorilla_gorilla.LT578336.1                             I 1421 I 717
s Graphiurus_murinus.GraMur_scaffold_10447                   32740 26 +     78134 G-TTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTATA
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6960 26 -     19426 G-CTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTTCA
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12109 26 -     15286 G-CTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTTCA
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13748 26 +     18253 G-CTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTTCA
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13849 26 -     41752 G-CTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTTCA
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13686 26 -     16460 G-CTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTTCA
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242473 26 +    327341 T-CTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTGGG
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20662364 26 +  22651954 G-TTGCAAG---------------TGGA------A-------------A-----A-A----TAGCACTACA
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1032 14 +      7595 G-CTCCAAG---------------TG-A------A-------------A-----A----------------
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 I 10
s Hoolock_leuconedys.ctg274                                    435019 25 +    630532 G-CTC-GAG---------------TGGA------A-------------A-----A-A----TATGGCCACA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45167 26 +     55795 T-TTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCCGTA
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83253 26 +    135385 G-TTCCAAG---------------TGGA------A-------------A-----A-A----TACCACTACA
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7521022 28 -   7955117 g-ttccaag---------------tgga------a-----------aaa-----a-a----tacTGCTATA
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   22649 26 +     31101 G-CTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTTCA
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8276932 26 -   9596543 G-CTCCAAC---------------TGGA------A-------------A-----A-A----TACTGCTACA
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    16520 26 -     42476 G-CTACACG---------------TGGA------A-------------A-----A-A----TACTGCTGCA
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15524201 26 -  30322482 G-CTCCAAC---------------TGGA------A-------------A-----A-A----TACTGCTTCA
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7877 25 +     64341 G-CTT-AAG---------------TGCA------A-------------A-----A-A----TATGGCTGCA
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                            217 25 -     35062 g-ctt-aag---------------tgca------a-------------A-----A-A----TATGGCTGTG
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        7905 25 +     35603 G-CTT-AAG---------------TGCA------A-------------A-----A-A----TATGGCTGCA
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    29321 25 +     38576 G-CTT-AAG---------------TGCA------A-------------A-----A-A----TATGGCTGCA
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         26021 25 +     66356 G-CTT-AAG---------------TGCA------A-------------A-----A-A----TATGGCTGCA
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         11093 26 -     23766 G-CTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTTCA
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29154 26 +     45836 G-CTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTTCA
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1692 26 +     25010 G-CTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTTCA
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27090 26 +     54090 G-CTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTTCA
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3043199 26 +   3914936 G-CTCCAAA---------------TGGA------A-------------A-----A-A----CACTGCTGTG
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6621 26 -     14121 G-CTCCGAG---------------TAGA------A-------------A-----A-A----CACTGGAGCA
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437368 25 +   1826925 G-CTC-AAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            5995 27 +     11245 G-CTCCAAG---------------CACA------A-------------A-----AAA----TACTGCTGTA
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004815 27 +   6120653 G-CTCCAAG---------------CACA------A-------------A-----AAA----TACTGCTGTA
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4217462 25 -  43346337 G-CTCCAAG---------------TG-A------A-------------A-----C-A----TCCTGCTGCA
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17955476 26 -  59628241 G-TTCCAAG---------------TGGA------A-------------A-----A-A----CATTGCTGTA
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               7181 25 +     40492 G-CTC-TAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59676440 25 +  60120075 G-CTC-TAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 12956 25 -     26193 g-ctc-tag---------------tgga------a-------------a-----a-a----taTGGCCCCA
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            80740 25 -    114318 g-ctc-tag---------------tgga------a-------------a-----a-a----taTGGCCCCA
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  6427 25 -     23192 g-ctc-tag---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                15900 25 -     29190 g-ctc-tag---------------tgga------a-------------a-----a-a----TATGGCCCCA
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  24465 25 +     37952 G-CTC-TAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186839554 25 + 187317192 G-CTC-TAG---------------TGGA------A-------------A-----A-A----TATGGACCCA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458117 25 -  25927173 G-CTC-TAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  80313 25 +     89720 G-CTC-TAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 7314 25 +     20474 G-CTC-TAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   7114 25 -     14993 g-ctc-tag---------------tgga------A-------------A-----A-A----TATGACCCCA
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  329980 25 -    668171 g-ctc-tag---------------tgga------a-------------a-----a-a----tATGGCCCCA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 5427 25 -     24072 g-ctc-tAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26052 25 -     45290 g-ctc-tag---------------tgga------a-------------a-----a-A----TATGGCCCCA
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90766 26 +     94391 G-CTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTGCA
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23937643 25 -  24302211 g-ctc-gag---------------tgga------a-------------a-----a-a----tatgGCCCCA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               351767 25 +    752769 G-CTC-GAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              18650 26 +    737560 G-CTCTAAG---------------TGGA------G-------------A-----A-A----TACTGTTGTT
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              50643 26 -    317179 G-CTCCAAG---------------TGGA------G-------------A-----A-A----TACTGTTGTT
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33103222 27 -  40650429 G-TTCCAAG---------------TGGA------AA------------A-----A-A----TACTGCCATA
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        10484 17 -    207569 -------------------------GGA------A-------------A-----A-A----TACGGCTGCa
i Megaderma_lyra.MegLyr_scaffold_4542                    I 3 I 112
s Mellivora_capensis.MelCap_flattened_line_69365             10197 26 +     13704 G-CTCCAAG---------------TGGA------A-------------A-----A-A----CACTGCTGTA
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 32867 31 +    140813 A-CTCCAAA---------------TGGA------A-------------AAAAAAA-T----TAGTGCTACA
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12182361 26 -  29670104 G-TTCCAAA---------------TAGA------A-------------A-----A-A----GAGTGCTACA
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                6112 25 -      7380 g-ctt-aag---------------tgca------A-------------A-----A-A----TATGGCTGCA
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_2457295                                341 25 +      1079 G-CTT-AAG---------------TGCA------A-------------A-----A-A----TATGGCTGCA
i Mico_humeralifer.k141_2457295                          C 0 C 0
s Mico_schneideri.k141_1950671                                      6124 25 -      7356 g-ctt-aag---------------tgca------a-------------A-----A-A----TATGGCTGCA
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18291626 27 -  93316391 G-CTCCAAG---------------AGGA------A-------------A-----AAA----TACTGCTTCA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    22466 12 -    145209 A-CTGCAAA---------------TG-A------A------------------------------------
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 11
s Micronycteris_hirsuta.MicHir_scaffold_52381                15799 26 -     19307 A-TTCCAAG---------------TGCA------G-------------A-----A-A----TACTGCTGCA
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11260599 26 -  27267610 G-ATCCAAA---------------TGGA------A-------------A-----A-A----TAGTGGTACA
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850761 26 +   8254450 G-CTCCAAG---------------GGGG------A-------------A-----A-A----TCCTGCTGCA
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34442 26 +     64694 G-CTCCAAG---------------GGGG------A-------------A-----A-A----TCCTGCTGCA
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9349 25 -     28506 g-ctc-aag---------------tgga------a-------------a-----a-a----tatGGCCCCA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6067 26 -      8324 G-CTCCAAA---------------TGGA------A-------------A-----A-A----CACTGCTGTG
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      9171 26 -     37649 G-CTCCAAG---------------AGGA------A-------------A-----A-A----TACTGCTTCA
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141772 26 -    366855 G-CTCCGAG---------------TGAG------G-------------A-----A-C----TACTGCTGCA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35573 26 +     37127 T-TTCCAAG---------------TGGA------A-------------A-----A-A----TACTCCTGTG
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           6971 26 +     14753 G-CTTCAAG---------------TGGA------A-------------A-----A-A----TACTGCTGAA
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84361481 26 - 120012414 G-CTCCAAA---------------TGAA------A-------------A-----A-A----GAGAGCTACA
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87650479 26 - 129401213 G-CTCCAAA---------------TGGA------A-------------A-----A-A----GAGAGCTACA
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31355138 26 -  89631738 G-CTCcaaa---------------tgga------a-------------a-----g-a----gagagctaCA
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90752540 26 - 130317789 G-CTCCAAA---------------TGGA------A-------------A-----A-A----GAGAGCTACA
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              5079 26 +     14296 G-TTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTACA
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               301610 26 -  14710649 g-ctCCAAG---------------TGGA------A-------------A-----A-A----CACTGCTGTA
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71386 28 -     80779 G-CTCTAAG---------------AAGA------AA-----------CA-----A-A----TACTACTACG
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                280614 26 -  10118263 G-CTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTGCA
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1587885 11 -   6019432 --------------------------------------------------------A----TACTGCTGCA
i Myotis_davidii.KB100139.1                              I 6 C 0
s Myotis_lucifugus.GL429869.1                              3903968 26 -   4330536 G-CCCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTGCA
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                         117 26 +      1835 G-CTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTGCA
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189414  9 +    196477 --------------------------------------------------------------ACTCTTGCA
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 5 C 0
s Nannospalax_galili.KL204047.1                            2034199 25 -   3037898 --cTCCAAA---------------TGGA------A-------------A-----A-A----TACTGCTACA
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               15351 25 +     21681 G-CTT-GAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20307653 26 +  31847680 G-CTCCAAA---------------TGGA------A-------------A-----A-A----CACTGCTGTG
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149544 26 -   9404916 G-TTCCAAG---------------TGGA------A-------------A-----A-A----CATTGCTGTA
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102586359 27 - 196305487 G-CTCCAAG---------------CAGA------A-------------A-----AAG----TACTGCTGTA
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              283 27 +      2075 G-CTCCAAG---------------CAGA------A-------------A-----AAG----TACTGCTGTA
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761713 27 + 199412804 G-CTCCAAG---------------CAGA------A-------------A-----AAG----TACTGCTGTA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1363685 21 +   3988456 ------aag---------------tggA------A-------------A-----A-A----TACCGCATCA
i Ochotona_princeps.JH802162.1                           I 1 C 0
s Octodon_degus.JH651603.1                                  746993 27 +  11899542 G-CTCTAAG---------------TGGA------AA------------A-----C-T----TACTACTACA
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                              506798 26 -   2017862 G-CTCCAAA---------------TGGA------A-------------A-----A-A----CACTGCTGTG
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   25267 26 +     28053 G-ATCCAAA---------------TGGA------A-------------A-----A-A----TAATGGTACA
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    80267 26 +    102263 G-TTCCAAA---------------TGGA------A-------------A-----A-A----CAGTGCTACA
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387               9985 25 -     18566 G-CTCCAAG---------------TG-A------A-------------A-----A-A----TACTGCTACA
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147481 26 + 174332312 G-CTCCGAG---------------TAGA------A-------------A-----A-A----TACAGGAGCA
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462492 26 -    559221 G-TTCCAAG---------------TGGA------A-------------A-----A-A----CATTGCTGTA
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4266 27 +      8798 G-TTCCAAG---------------CAAA------A-------------G-----AAA----TACTGCTATA
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696429 27 -   1103335 G-TTCCAAG---------------CAAA------A-------------G-----AAA----TACTGCTATA
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    44308 25 +     80009 G-CTC-TAG---------------TGGA------A-------------A-----A-A----TATGGCCGCA
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189143210 25 + 189151597 G-CTC-TAG---------------TGGA------A-------------A-----A-A----TATGGCCGCA
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  151304 26 +    230217 T-TTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTGTA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                264513 26 +  18783137 T-TTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTGTA
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4721392 26 -   8748460 T-TTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTGTA
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183443445 25 + 183742232 G-CTC-GAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7091 25 +     20448 G-CTC-GAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563903 25 +  20919399 G-CTC-GAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   5835 25 +     41871 G-CTC-GAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     9128 25 +     27711 G-CTC-GAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                   125 25 -     11374 G-CTC-GAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Papio_ursinus.k141_5274964                             I 49 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12803 26 -     78924 T-TTCTAAG---------------TGGA------A-------------G-----A-A----TACTGTTGTA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10242 27 +     13100 A-CTCCAAG---------------CAGA------A-------------A-----AAA----TACTGCTGTA
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8648 27 +     25941 A-CTCCAAG---------------CAGA------A-------------A-----AAA----TACTGCTGTA
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18194893 26 -  18517816 G-TTCTACA---------------TGGA------A-------------A-----A-A----TAGTGCTACA
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28265 26 -     29689 G-TTCCAAG---------------TGGG------A-------------A-----A-A----TATCACTACG
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Piliocolobus_badius.k141_1234363                           43842 25 +     62158 G-CTC-GAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        38589 25 +     89929 G-CTC-GAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40005 25 +     51399 G-CTC-GAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296243 25 -  14605196 G-CTC-GAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1909 26 +     22620 A-TTCCAGG---------------TGGA------A-------------A-----A-A----TACTGCTGCA
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189131346 25 + 189387572 G-CTC-GAG---------------TGGA------A-------------A-----A-A----TATGGCTGCA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570953 25 +   9816681 G-CTC-GAG---------------TGGA------A-------------A-----A-A----TATGGCTGCA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               73527 25 -     81375 g-ctc-gag---------------tgga------a-------------a-----a-a----TATGGCCCCA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              5347 25 +     19060 G-CTC-GAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 13487 14 -     22811 G-CTCCAAG---------------TG-A------A-------------A-----A----------------
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 I 10
s Prolemur_simus.MPIZ01000396.1                            2596881 26 -   4620579 G-CTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTTCA
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990867 26 +   2598838 G-CTCCAAG---------------TGAA------A-------------A-----A-A----TACTGCTTCA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29179 26 +     38485 G-CTCCAAG---------------TGAA------A-------------A-----A-A----TACTGCTTCA
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1222 26 -     13098 G-CTCCAAG---------------TGAA------A-------------A-----A-A----TACTGCTTCA
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26700 26 +     35766 G-CTCCAAG---------------TGAA------A-------------A-----A-A----TACTGCTTCA
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4887 26 -     24134 G-CTCCAAG---------------TGAA------A-------------A-----A-A----TACTGCTTCA
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28712 26 -     67325 G-CTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTTCA
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4935 26 -      6182 G-CTCCAAG---------------TGAA------A-------------A-----A-A----TACTGCTTCA
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            10511 31 -     21651 a-ctccaaa---------------tgaa------a-------------aaaaaaa-a----tagtgctacA
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            15227 26 -     21811 G-CTCCAAG---------------TGCA------G-------------A-----A-A----TAGCGCTGCA
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40387 26 +     42204 G-CTCCAAA---------------TGGA------A-------------A-----A-A----CACTGCTGTA
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22976932 26 +  28871421 G-CTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTGCA
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                6985 26 -      8028 G-CTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTGCA
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20274460 26 -  38429054 T-TTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTGTA
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15360 25 -     91421 g-ctc-gag---------------tgga------a-------------a-----a-a----TATGGCCCCA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7609480 25 +   7812017 G-CTC-GAG---------------TGGA------A-------------A-----A-A----CATGGCCCCA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             15332 25 -     72585 g-ctc-gag---------------tgga------a-------------a-----a-A----CATGGCCCCA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53570741 26 +  90668790 G-CTCCAAA---------------TAGG------A-------------A-----A-A----GAGAGCTACA
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             7043 25 -     11128 g-cTC-GAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236392 25 - 195417433 G-CTC-GAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672048 25 +   7961872 G-CTC-GAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87954 26 -     96226 G-CTCCAAG---------------TGGG------A-------------A-----A-A----TACTGCTGCA
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_8081                                   493 25 +     42994 G-CTT-AAG---------------TGCA------A-------------A-----A-A----TATGGCTGCG
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_57697                                278 25 +      1030 G-CTT-AAG---------------TGCA------A-------------A-----A-A----TATGGCTGCA
i Saguinus_imperator.k141_57697                          C 0 C 0
s Saguinus_inustus.k141_3945547                                357 25 -      8737 g-ctt-aag---------------tgca------a-------------a-----a-a----tATGGCTGCG
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_midas.LG03                                    209469844 25 + 209938924 G-CTT-AAG---------------TGCA------A-------------A-----A-A----TATGGCTGCG
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 8479 25 -      9399 g-ctt-aag---------------tgca------a-------------a-----a-A----TGTGGCTGTG
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951217 25 - 121099817 G-CTG-AAG---------------TGCA------A-------------A-----A-A----TATGGCTGCA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23556 28 +     46362 G-CTG-AAG---------------TGC-------A-------------A-----A-AATATCTTCGCTGCA
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               23651 28 +     45824 G-CTG-AAG---------------TGC-------A-------------A-----A-AATATCTTCGCTGCA
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             40330 28 -     64574 g-ctg-aag---------------tgc-------a-------------a-----a-aATATCTTCGCTGCA
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               3402 29 -     23631 g-cTG-AAG---------------TGCA------A-------------A-----A-AATATCTTCGCTGCA
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 23547 28 -     61129 G-CTG-AAG---------------TGC-------A-------------A-----A-AATATCTTCGCTGCA
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420925 24 -   5703754 g-ctt-aag---------------tgc-------a-------------a-----a-t----tatggctGCG
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          56166 24 -     80660 g-ctt-aag---------------tgc-------a-------------a-----a-t----tatGGCTGTG
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153354 26 -    313613 G-TTCCAAG---------------TAGA------A-------------A-----A-A----TACTGCTGCA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                          224 25 -     12572 G-CTC-GAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27074 25 +     39453 G-CTC-GAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            7592 25 +     27826 G-CTC-GAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             7114 25 -     19483 g-ctc-gag---------------tgga------a-------------a-----a-A----TATGGCCCCA
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                       415 25 -     12762 G-CTC-GAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                            276 25 +     13763 G-CTC-GAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                      439 26 -     30804 G-CTCCAGA---------------TGGA------A-------------A-----A-A----GAATACTACA
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               3922 25 +   1910179 C-TTCCAAG---------------TGG-------A-------------A-----A-A----TATTGCTGCA
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13651170 26 -  18376816 TTCTCCAAG---------------TAG-------A-------------A-----A-A----TATGGCTGCA
i Sorex_araneus.JH798187.1                               I 2 C 0
s Spermophilus_dauricus.KZ294078.1                         1954077 27 -   3870691 G-TTCCAAG---------------TGGA------AA------------A-----A-A----TACTGCTATA
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30885 26 +     97271 G-CTCCGAG---------------TGGA------A-------------A-----A-A----CAGTGCTGTA
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              18476 26 -    196729 T-CTCCAAG---------------TGGA------A-------------A-----A-A----CACTGCTGTG
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6810958 25 +  69701581 A-ACCCAAG----------------AAA------A-------------A-----C-A----TACTGCTGCA
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                10961 26 +     41958 G-CTCCAAG---------------TGGA------A-------------A-----A-A----TACTGTTGCA
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72775  9 +    116680 --------------------------------------------------------------GCTCTTGCA
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 5 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118915 26 -    156842 G-CTCCAAG---------------TGGA------A-------------A-----A-A----CACTGCTGCA
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387372 26 +    539355 G-CTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTGCA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               26621 26 +     70052 G-CTCTGAG---------------TGGA------A-------------A-----A-T----TTTGACTGCA
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1418 26 -     16117 G-CTCTGAG---------------TGGA------A-------------A-----A-T----TTTGACTGCA
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428763 25 + 186847797 G-CTC-GAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105586 25 +    114563 A-TCCAAAG---------------TGG-------A-------------A-----A-A----TATCACTACA
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   6554 26 +      8208 G-CTCCAAG---------------AGGG------A-------------A-----A-A----TGGTGCTTCA
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81345 26 +    610378 G-CTCCTAG---------------TGCA------G-------------A-----A-A----TACCGCTGTA
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         11165 25 -     20410 g-ctc-gag---------------tgga------a-------------a-----a-A----TATGGCCCCA
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                       279 25 -     12674 g-ctc-gag---------------tgga------a-------------a-----a-a----tATGGCCCCA
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       11266 25 +     19930 G-CTC-GAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       7677 25 -     19997 g-ctc-gag---------------tgga------a-------------a-----A-A----TATGGCCCCA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            47816 25 -     60166 g-ctc-gag---------------tgga------a-------------a-----a-a----taTGGCCCCA
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        15288 25 -     27529 g-ctc-gag---------------tgga------a-------------A-----A-A----TATGGCCCCA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     15232 25 -     18194 g-ctc-gag---------------tgga------a-------------a-----a-a----TACGGCCCCA
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           8944 25 -     21137 g-ctc-gaG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    7647 25 -     10723 g-ctC-GAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         6819 25 +      9834 G-CTC-GAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        25132 25 +     32220 G-CTC-GAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5939234 25 +   6242583 G-CTC-GAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        8485 25 +     20839 G-CTC-GAG---------------TGGA------A-------------A-----A-A----TATGGCCCCA
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4293386 25 +  10818551 G-CTCCAAG---------------TG-A------A-------------A-----A-A----TCCTGCTGCA
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2155943 35 +   4065304 G-ctcagag---------------tgaa------a----aagaaaaaaa-----a-a----taccactgcA
i Tupaia_chinensis.KB320699.1                            I 215 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9381 39 -     10553 G-CTCAGAG---------------TGAA------AAAGAAAAAAGAAAA-----A-A----TACCACTGCA
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   53445 26 -     77625 G-TTTCAAG---------------TAGT------A-------------A-----A-A----TACTGCTGCA
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4850587 26 -   5085361 g-CTCCAAG---------------TGGA------A-------------A-----A-A----CACTGCTGTG
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  11546 26 +     50397 G-CTCTGAG---------------TGGA------A-------------A-----A-A----TATTGCTTCA
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11605 26 +     24756 G-CTCTGAG---------------TGGA------A-------------A-----A-A----TATTGCTTCA
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5372039 26 -   5488506 C-ACCCAAG---------------TGAA------A-------------A-----A-A----TGCTGCTGCA
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10940 26 -     43706 G-TTCCAAG---------------TGGA------A-------------A-----A-A----CATTGCTGTA
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          1205 26 +    224448 G-TTCCAAG---------------TGGA------A-------------A-----A-A----TACTGCTATA
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          5516 26 +     86975 G-CTCCAAA---------------TGGA------A-------------A-----A-A----CACTGCTGTG
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      15028 26 +     63895 G-CTCCAAA---------------TGGA------A-------------A-----A-A----TACTGCCACA
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Saguinus_labiatus.k141_285685                               8505  5 +      8564 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6990 1 +     62944 G
s Acinonyx_jubatus.LLWD01001279.1                           827479 1 -   1699592 C
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     70943 1 +     87051 A
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510752 1 -  29979442 G
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             79528 1 -    347723 G
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14920 1 -     52922 g
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         14833 1 -     28001 G
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          5331 1 -     18505 G
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           6183 1 -     12518 G
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              7776 1 +     51355 G
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                 885 1 -     36483 G
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              11334 1 +     28687 G
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1509701                                25161 1 +     25266 G
i Alouatta_juara.k141_1509701                            C 0 C 0
s Alouatta_macconnelli.k141_918386                             882 1 -      9457 G
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_3472759                            18468 1 -     18578 G
i Alouatta_nigerrima.k141_3472759                        C 0 C 0
s Alouatta_palliata.k141_2135620                              3852 1 +     47717 G
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                               564 1 +      5663 G
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             15016 1 +     50774 G
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185524 1 +    412891 G
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  15778 1 -     33861 G
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            15822 1 -     34016 G
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4298202 1 -   5030052 G
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             15811 1 -     34685 G
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28936 1 -     47192 G
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      12777 1 +     20879 G
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       11625 1 +     14667 G
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4932 1 +     43469 G
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 35
s Avahi_laniger.k141_765380                                  53859 1 -     92717 G
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54481 1 +     85213 G
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             5623 1 -     10423 G
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             25092 1 +     31915 G
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590777 1 - 189096842 G
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                               176 1 -     12329 G
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002565 1 -  17673402 G
i Camelus_bactrianus.KN276810.1                          C 0 I 45
s Camelus_dromedarius.KN272107.1                           2335023 1 -   7040546 G
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  403307 1 -   1652518 G
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17799343 1 -  60362399 G
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                       91 1 -     43241 G
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034786 1 -   9314153 G
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17959262 1 -  59632846 G
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18500563 1 +  63665305 G
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1227 1 -     12242 G
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           156156 1 -    496798 G
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5281 1 -     11696 G
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137244 1 +    179628 A
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     93236 1 +    217609 G
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                         10258 1 -     11392 G
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               6326 1 -      7577 G
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25652995 1 +  26074798 g
i Cebus_albifrons.Contig27                               C 0 I 58
s Cebus_olivaceus.k141_1764483                                 933 1 +     28840 G
i Cebus_olivaceus.k141_1764483                           C 0 I 58
s Cebus_unicolor.k141_1837183                                  658 1 +     14051 G
i Cebus_unicolor.k141_1837183                            C 0 I 58
s Cephalopachus_bancanus.k141_1423433                         5654 1 +     31688 G
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12231623 1 +  27778364 G
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2650 1 -     25243 G
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4475848 1 +   4669795 G
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                         352 1 +     17872 G
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           1009 1 -     14043 G
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9042 1 +     27781 G
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         9208 1 -     20310 G
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          12188 1 +     29689 G
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            6939 1 -     20078 G
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          14856 1 -     27936 G
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            3726 1 -     17152 G
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38817267 1 +  39242232 G
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222957 1 -  21565898 G
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40075 1 -     53127 G
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                         326 1 +     13442 G
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14875 1 -     27947 G
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         14851 1 +     17596 G
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                           898 1 +     14005 G
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             704 1 -      8501 G
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             21229 1 -     52598 G
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16594 1 +     57038 G
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1252973 1 +   2543920 G
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2206961                            524 1 -     15524 G
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18428835 1 -  18827391 G
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15272 1 -     50209 G
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422272 1 + 135778131 G
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 18484 1 +     19366 G
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            173561 1 +    839153 G
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1910785 1 +   2368649 G
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949037 1 + 200372422 G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37319 1 +     84244 G
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17548261 1 -  53390261 G
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14577 1 -     20389 G
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 1 I 58
s Cricetomys_gambianus.CriGam_scaffold_18520                 50359 1 +     63868 A
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11667712 1 + 224834208 A
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28665 1 -     87169 G
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837243 1 +   1526836 A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  35929 1 +     51376 G
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 168
s Dasypus_novemcinctus.JH564415.1                            63711 1 +   2246927 G
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537456 1 -  12879189 G
i Daubentonia_madagascariensis.ctg71                     C 0 I 52
s Desmodus_rotundus.KZ672289.1                             8630298 1 +  20541912 G
i Desmodus_rotundus.KZ672289.1                           C 0 I 59
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673474 1 +   1390856 G
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6223 1 +    198055 G
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36567 1 +     67921 G
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 46
s Echinops_telfairi.JH980293.1                            48780740 1 + 111700974 G
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.KE759718.1                                  10699 1 +     11740 T
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1097820 1 +  10337057 G
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          20446 1 -    110024 A
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                             577 1 +      8657 A
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16329486 1 -  41312741 G
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2145901 1 -  14770903 G
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1283728 1 +   4378816 G
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18531548 1 -  39960074 G
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               33577 1 +    498745 G
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3328403 1 -   7059049 G
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21205440 1 -  21539334 g
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              13941 1 -     14127 G
i Eulemur_albifrons.k141_342033                          C 0 I 131
s Eulemur_collaris.k141_377015                                6655 1 -     16928 G
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15687 1 -     25546 G
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12883 1 +     26330 G
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14118 1 +     23973 G
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12880 1 +     75513 G
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10810 1 +     97555 G
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              301 1 +     13026 G
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4354 1 -     17153 G
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13927 1 +    111500 G
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237121 1 + 206538554 C
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195964 1 + 205367284 C
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  9717 1 -     36744 C
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             850601 1 +   3816255 G
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg2040                                     426773 1 -    453645 G
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4463 1 +     11339 G
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            1761 1 +     41679 G
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1356 1 -      9135 G
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            31525 1 +     49224 G
i Glis_glis.GliGli_scaffold_19807                        C 0 I 46
s Gorilla_beringei.k141_3596273                              16245 1 -     32273 G
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186338382 1 + 186649187 G
i Gorilla_gorilla.LT578341.1                             I 25 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   32766 1 +     78134 G
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6986 1 -     19426 G
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12135 1 -     15286 G
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13774 1 +     18253 G
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13875 1 -     41752 G
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13712 1 -     16460 G
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242499 1 +    327341 G
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20662390 1 +  22651954 G
i Heterocephalus_glaber.JH602082.1                       C 0 I 23
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1056 1 +      7595 T
i Heterohyrax_brucei.HetBruBak_scaffold_122365           I 10 C 0
s Hoolock_leuconedys.ctg274                                    435044 1 +    630532 G
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45193 1 +     55795 G
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83279 1 +    135385 G
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7521050 1 -   7955117 G
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   22675 1 +     31101 G
i Indri_indri.k141_3655594                               C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    16546 1 -     42476 G
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15524227 1 -  30322482 G
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7902 1 +     64341 G
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                            242 1 -     35062 G
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        7930 1 +     35603 G
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    29346 1 +     38576 G
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         26046 1 +     66356 G
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         11119 1 -     23766 G
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29180 1 +     45836 G
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1718 1 +     25010 G
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27116 1 +     54090 G
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3043225 1 +   3914936 G
i Leptonychotes_weddellii.KB714746.1                     C 0 I 49
s Lepus_americanus.LepAme_scaffold_107385                     6647 1 -     14121 A
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437393 1 +   1826925 G
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            6022 1 +     11245 G
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004842 1 +   6120653 G
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4217487 1 -  43346337 A
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17955502 1 -  59628241 G
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               7206 1 +     40492 G
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59676465 1 +  60120075 G
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 12981 1 -     26193 G
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            80765 1 -    114318 G
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  6452 1 -     23192 G
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                15925 1 -     29190 G
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  24490 1 +     37952 G
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186839579 1 + 187317192 G
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458142 1 -  25927173 G
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  80338 1 +     89720 G
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 7339 1 +     20474 G
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   7139 1 -     14993 G
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  330005 1 -    668171 G
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 5452 1 -     24072 G
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26077 1 -     45290 G
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90792 1 +     94391 G
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23937668 1 -  24302211 G
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               351792 1 +    752769 G
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              18676 1 +    737560 G
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              50669 1 -    317179 G
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33103249 1 -  40650429 G
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        10613 1 -    207569 G
i Megaderma_lyra.MegLyr_scaffold_4542                    I 112 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10223 1 +     13704 G
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 32898 1 +    140813 A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12182387 1 -  29670104 A
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                6137 1 -      7380 G
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_2457295                                366 1 +      1079 G
i Mico_humeralifer.k141_2457295                          C 0 C 0
s Mico_schneideri.k141_1950671                                      6149 1 -      7356 G
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18291653 1 -  93316391 G
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    22489 1 -    145209 G
i Microgale_talazaci.MicTal_scaffold_6613                I 11 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                15825 1 -     19307 G
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 59
s Microtus_ochrogaster.CM001695.1                         11260625 1 -  27267610 A
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850787 1 +   8254450 G
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34468 1 +     64694 G
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9374 1 -     28506 G
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6093 1 -      8324 G
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 49
s Mirza_zaza.k141_952172                                      9197 1 -     37649 G
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141798 1 -    366855 G
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 61
s Mungos_mungo.MunMun_flattened_line_23663                   35599 1 +     37127 G
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           6997 1 +     14753 G
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84361507 1 - 120012414 A
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87650505 1 - 129401213 A
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31355164 1 -  89631738 T
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90752566 1 - 130317789 A
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              5105 1 +     14296 G
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 47
s Mustela_putorius.JH418006.1                               301636 1 -  14710649 G
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71414 1 -     80779 G
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                280640 1 -  10118263 G
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1587896 1 -   6019432 G
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3903994 1 -   4330536 G
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                         143 1 +      1835 G
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189423 1 +    196477 G
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 I 57
s Nannospalax_galili.KL204047.1                            2034224 1 -   3037898 A
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               15376 1 +     21681 G
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20307679 1 +  31847680 G
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 49
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149570 1 -   9404916 G
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102586386 1 - 196305487 G
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              310 1 +      2075 G
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761740 1 + 199412804 G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1363706 1 +   3988456 A
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  747020 1 +  11899542 G
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                              506824 1 -   2017862 G
i Odobenus_rosmarus.KB229312.1                           C 0 I 49
s Ondatra_zibethicus.OndZib_scaffold_46174                   25293 1 +     28053 G
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387              10010 1 -     18566 G
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147507 1 + 174332312 A
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462518 1 -    559221 G
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4293 1 +      8798 G
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696456 1 -   1103335 G
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    44333 1 +     80009 G
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189143235 1 + 189151597 G
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  151330 1 +    230217 C
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                264539 1 +  18783137 C
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4721418 1 -   8748460 C
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183443470 1 + 183742232 G
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7116 1 +     20448 G
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563928 1 +  20919399 G
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   5860 1 +     41871 G
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     9153 1 +     27711 G
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                   150 1 -     11374 G
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12829 1 -     78924 G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10269 1 +     13100 G
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8675 1 +     25941 G
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18194919 1 -  18517816 A
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28291 1 -     29689 A
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 I 42
s Piliocolobus_badius.k141_1234363                           43867 1 +     62158 G
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        38614 1 +     89929 G
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40030 1 +     51399 G
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296268 1 -  14605196 G
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1935 1 +     22620 G
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189131371 1 + 189387572 G
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570978 1 +   9816681 G
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               73552 1 -     81375 G
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              5372 1 +     19060 G
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 13511 1 -     22811 T
i Procavia_capensis.ProCapCap_scaffold_85530             I 10 C 0
s Prolemur_simus.MPIZ01000396.1                            2596907 1 -   4620579 G
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990893 1 +   2598838 G
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29205 1 +     38485 G
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1248 1 -     13098 G
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26726 1 +     35766 G
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4913 1 -     24134 G
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28738 1 -     67325 G
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4961 1 -      6182 G
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            10542 1 -     21651 A
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            15253 1 -     21811 G
i Pteronotus_parnellii.KE909381.1                        C 0 I 57
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40413 1 +     42204 G
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22976958 1 +  28871421 G
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                7011 1 -      8028 G
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20274486 1 -  38429054 C
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15385 1 -     91421 G
i Pygathrix_cinerea.k141_1153803                         C 0 I 29
s Pygathrix_nigripes_b.ctg100                                 7609505 1 +   7812017 G
i Pygathrix_nigripes_b.ctg100                               C 0 I 28
s Pygathrix_nigripes_a.k141_215492                             15357 1 -     72585 G
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53570767 1 +  90668790 T
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             7068 1 -     11128 G
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236417 1 - 195417433 G
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672073 1 +   7961872 G
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                87980 1 -     96226 G
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 49
s Saguinus_bicolor.k141_8081                                   518 1 +     42994 G
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_57697                                303 1 +      1030 G
i Saguinus_imperator.k141_57697                          C 0 C 0
s Saguinus_inustus.k141_3945547                                382 1 -      8737 G
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_midas.LG03                                    209469869 1 + 209938924 G
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 8504 1 -      9399 G
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951242 1 - 121099817 G
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23584 1 +     46362 G
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               23679 1 +     45824 G
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             40358 1 -     64574 G
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               3431 1 -     23631 G
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 23575 1 -     61129 G
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5420949 1 -   5703754 G
i Sapajus_apella.ctg103                                  C 0 I 58
s Sapajus_macrocephalus.k141_351809                          56190 1 -     80660 G
i Sapajus_macrocephalus.k141_351809                      C 0 I 58
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153380 1 -    313613 G
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                          249 1 -     12572 G
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27099 1 +     39453 G
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            7617 1 +     27826 G
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             7139 1 -     19483 G
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                       440 1 -     12762 G
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                            301 1 +     13763 G
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                      465 1 -     30804 A
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               3947 1 +   1910179 G
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13651196 1 -  18376816 G
i Sorex_araneus.JH798187.1                               C 0 I 42
s Spermophilus_dauricus.KZ294078.1                         1954104 1 -   3870691 G
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30911 1 +     97271 G
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              18502 1 -    196729 G
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6810983 1 +  69701581 G
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                10987 1 +     41958 G
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72784 1 +    116680 G
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 I 57
s Tapirus_indicus.TapInd_scaffold_9301                      118941 1 -    156842 G
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387398 1 +    539355 G
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 14
s Tarsius_lariang.k141_2201908                               26647 1 +     70052 G
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1444 1 -     16117 G
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428788 1 + 186847797 G
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105611 1 +    114563 G
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 41
s Tolypeutes_matacus.TolMat_scaffold_228639                   6580 1 +      8208 G
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81371 1 +    610378 G
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         11190 1 -     20410 G
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                       304 1 -     12674 G
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       11291 1 +     19930 G
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       7702 1 -     19997 G
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            47841 1 -     60166 G
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        15313 1 -     27529 G
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     15257 1 -     18194 G
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           8969 1 -     21137 G
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    7672 1 -     10723 G
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         6844 1 +      9834 G
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        25157 1 +     32220 G
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5939259 1 +   6242583 G
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        8510 1 +     20839 G
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4293411 1 +  10818551 A
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2155978 1 +   4065304 C
i Tupaia_chinensis.KB320699.1                            C 0 I 49
s Tupaia_tana.TupTan_flattened_line_97126                     9420 1 -     10553 C
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 49
s Uropsilus_gracilis.UroGra_scaffold_12083                   53471 1 -     77625 G
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4850613 1 -   5085361 G
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  11572 1 +     50397 G
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11631 1 +     24756 G
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5372065 1 -   5488506 G
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10966 1 -     43706 G
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          1231 1 +    224448 G
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          5542 1 +     86975 G
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 49
s Zapus_hudsonius.ZapHud_scaffold_11398                      15054 1 +     63895 A
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Saguinus_labiatus.k141_285685                               8505 5 +      8564 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80293 0 +    102263 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8276958 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Crocidura_indochinensis.CroInd_scaffold_37019               3176 0 -     19598 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     74657 0 -     89534 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       6991 132 +     62944 ATTGT-AAAGAATGACCTGAG-AG-AATTAGTGCTTCTTTG-AA-A-TCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACAGATT--C-CT-----------------AAAAC-C-CCAT-AATA-ATTATGTGT-ATTAC-C-ATC
s Acinonyx_jubatus.LLWD01001279.1                           827480 133 -   1699592 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-TA-ATTCTG---A--ACA-C--A--GC-----CTC--T-C-T--AGATTTCAggat-ttaa------------agg---gaa-a-aaaggaacacAGATA--C-CT-----------------GAAGC-C-CTGT-AATA-ATGATTTAT-CTTAC-C-ATC
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     70944 125 +     87051 AGTCT-AAAATCAGTCCCAAG-AG-AATCCATGGTGCCCTG-AA-AATCTG---A--A---C--A--GA-----CTC--A-C-G--AGGTGTCAGAAT-TCAC------------AAG---GGA-G-G----GACATAGATA--C-CT-----------------GAAAC-T-CAGT-CATA-ATGGTGTGT-C--AC-G-AGC
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510753 135 -  29979442 ACTCT-AAATAATGGCCTGAA-AG-AATTCATGCTTCTCTG-AA-ATTCTG---A--ACA-C--A--GC-----CTC--T-C-T-AATATTTCAGGAT-TTAA------------AGG---GGG-A-GAAGGAACACAGATA--C-CT-----------------GAAACCC-CTGT-AATA-ATGATGTAT-CTTCC-C-ATC
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             79529 105 -    347723 ATTCT-AAATAATGGCCTGAG-AG-AATTCCTACTTCTCTG-TA-ATTCTG---A--ACA-T--A--GT-----CTC--T-C-T-AATATTTCAGGAT-TTaa------------agg---gga-a-gaaggaaca--gaTA--C-CC-----------------AAAAC----------------------------------
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 26
s Allactaga_bullata.AllBul_scaffold_9566                     74657 130 -     89534 ATTCT-AAATAATGGCCCAAG-AG-AATTCATGCTTCTCTG-AA-AAGCTG---A--A---TGCA--GT-----CTC--A-C-T--ATATTTCAGAAT-TAAT------------AGG---GA--A-GGAAGACCAGGGATG--C-CT-----------------GAAAC-C-CAGC-CATA-ATGATTTCC-C--AC-C-GTC
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   14921 130 -     52922 ATTGT-AAAGAATGACCTAAG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATA--C-CT-----------------GAAAC-C-CTAT-AATA-AT---GTGT-CTTAC-C-GTC
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         14834 133 -     28001 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CA-----C-C--ACATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATA--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-ATC
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          5332 133 -     18505 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATA--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-ATC
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           6184 133 -     12518 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATA--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-ATC
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              7777 134 +     51355 ATTGT-AAAGAATGACCTAAG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACG-C--AGCCT-----CT-----C-T--ATATTTCAGAAT-TATT------------AGG---GAA-A-AGAGAAACACAGATC--C-CT-----------------GAAAC-C-CCAT-AATA-AGTGTGTGT-CTTAC-TCATC
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                 886 134 -     36483 ATTGT-AAAGAATGACCTAAG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACG-C--AGCCT-----CT-----C-T--ATATTTCAGAAT-TATT------------AGG---GAA-A-AGAGAAACTCAGATC--C-CT-----------------GAAAC-C-CCAT-AATA-AGTGTGTGT-CTTAC-TCATC
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              11335 134 +     28687 ATTGT-AAAGAATGACCTAAG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACG-C--AGCCT-----CT-----C-T--ATATTTCAGAAT-TATT------------AGG---GAA-A-AGAGAAACACAGATC--C-CT-----------------GAAAC-C-CCAT-AATA-AGTGTGTGT-CTTAC-TCATC
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1509701                                25162 104 +     25266 ATTGT-AAAGAATGACCTAAG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACG-C--AGCCT-----CT-----C-T--ATATTTCAGAAT-TATT------------AGG---GAA-A-AGAGAAACACAGATC--C-CT-----------------GAA------------------------------------
i Alouatta_juara.k141_1509701                            C 0 N 0
s Alouatta_macconnelli.k141_918386                             883 134 -      9457 ATTGT-AAAGAATGACCTAAG-AG-AAATAATGCTTCTTTG-AA-AATCTG---A--ACG-C--AGCCT-----CT-----C-T--ATATTTCAGAAT-TATT------------AGG---GAA-A-AGAGAAACACAGATC--C-CT-----------------GAAAC-C-CCAT-AATA-AGTGTGTGT-CTTAC-TCATC
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_3472759                            18469 109 -     18578 ATTGT-AAAGAATGACCTAAG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACG-C--AGCCT-----CT-----C-T--ATATTTCAGAAT-TATT------------AGG---GAA-A-AGAGAAACACAGATC--C-CT-----------------GAAAC-C-CC-----------------------------
i Alouatta_nigerrima.k141_3472759                        C 0 N 0
s Alouatta_palliata.k141_2135620                              3853 134 +     47717 ATTGT-AAAGAATGACGTAAG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACG-C--AGCCT-----CT-----C-T--ATATTTCAGAAT-TATT------------AGG---GAA-A-AGAGAAACACAGATC--C-CT-----------------GAAAC-C-CCAT-AATA-AGTGTGTGT-TTTAC-TCATC
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                               565 134 +      5663 ATTGT-AAAGAATGACCTAAG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACG-C--AGCCT-----CT-----C-T--ATATTTCAGAAT-TATT------------AGG---GAA-A-AGAGAAACACAGATC--C-CT-----------------GAAAC-C-CCAT-AATA-AGTGTGTGT-CTTAC-TCATC
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             15017 134 +     50774 ATTGT-AAAGAATGACCTAAG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACG-C--AGCCT-----CT-----C-T--ATATTTCAGAAT-TATT------------AGG---GAA-A-AGAGAAACACAGATC--C-CT-----------------GAAAC-C-CCAT-AATA-AGTGTGTGT-CTTAC-TCATC
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185525 131 +    412891 ATTCT-ACATAATGGCCGGAG-AG-AATTCACGCTTCTCTG-AA-AATCTG---A--GCA-C--A--GA-----CTC--T-C-T--TTCCTTCAGAAT-TCAT------------AGG---GAA-A-GGAGGAACACGGAGA--C-CT-----------------GAAAC-C-CAGT-AATA-ATAAT--GC-CTTAC-C-ATT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  15779 134 -     33861 ATTGT-AAAGAATGACCTGGT-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CT-----C-T--ATATTTCAGAAT-TATT------------AGG---GAA-A-AGGGAAACACAGATA--C-CA-----------------GAAAC-C-CCGT-AATA-ACTGTGTGT-CTTAC-CCATC
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            15823 134 -     34016 ATTGT-AAAGAATGACCTGGG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CT-----C-T--ATATTTCAGAAT-TATT------------AGG---GAA-A-AGAGAAACACAGATA--C-CA-----------------GAAAC-C-CCGT-AATA-ACTGTGTGT-CTTAC-CCATC
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4298203 134 -   5030052 ATTGT-AAAGAATGACCTGGG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CT-----C-T--ATATTTCAGAAT-TATT------------Agg---gaa-a-agagaaacacagaTA--C-CA-----------------GAAAC-C-CCGT-GATA-ACTGTGTGT-CTTAC-CCATC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             15812 134 -     34685 ATTGT-AAAGAATGACCTGGG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CT-----C-T--ATATTTCAGAAT-TATT------------AGG---GAA-A-AGAGAAACACAGATA--C-CA-----------------GAAAC-C-CCGT-AATA-ACTGTGTGT-CTTAC-CCATC
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               28937 134 -     47192 ATTGT-AAAGAATGACCTGGG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CT-----C-T--ATATTTCAGAAT-TATT------------AGG---GAA-A-AGAGAAACACAGATA--C-CA-----------------GAAAC-C-CCGT-AATA-ACTGTGTGT-CTTAC-CCATC
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      12778 131 +     20879 ATTCT-AAATAATGGCCCAAG-AG-AATTCATGCTTCTCTG-AA-AATCTG---A--A---CATG--GT-----CTC--T-C-T--ATATTTCAGAAT-TAAT------------AGG---GAA-A-GGAATAACATGGATA--T-CT-----------------AAAAC-C-CAGT-AATA-ATGATGTGG-C--AT-G-ATT
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       11626 131 +     14667 ATTCT-AAATAATGGCCTGAG-AG-AATTCGTGCCTCTCTT-AC-AATCTG---A--ACC-T--A--CT-----CT-----C-C--ATATTTCAGAAT-TAAT------------TGG---GAA-A-GGAGGAACATGGATA--T-CT-----------------GAAAC-C-CAGC-AATA-ACAATGTTT-CTCAC-C-ATC
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  4968  80 +     43469 ----------------------------------------------------------------A--GA-----CT--TT-C-T--CTCGTTCAGAAT-TCAT------------AGG---GAA-A-GGAGGAACACAGAGA--C-CT-----------------GAAAC-C-CAGA-AATA-ACGAT--GC-CTTAC-C-ATT
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 35 C 0
s Avahi_laniger.k141_765380                                  53860 131 -     92717 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCTG---A--ACA-C--A--CT-----CT-----C-T--ATATTTCAGAAT-TAAT------------TGG---GAA-A-GGAGGAACATGGATA--C-TT-----------------GAAAC-C-CAGT-AATA-ATGATGTGT-CTTAC-C-ATC
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54482 130 +     85213 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCTG---A--ACA-C--A--CT-----CT-----C-T--ATATT-CAGAAT-TAAT------------TGG---GAA-A-GGAAGAACATGGATA--C-TT-----------------GAAAC-C-CAGT-AATA-ATGATGTGT-CTTAC-C-ATC
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             5624 134 -     10423 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CT-----C-T--ATATTTCAGAAT-TATT------------AGG---GAA-A-AGAGAAACACAGATA--C-CA-----------------GAAAC-C-CCAT-AATA-ACTGTGTGT-CTTAC-TCATC
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             25093 134 +     31915 ACTGT-AAAGAATGACCTGAG-AG-AATTCATGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CT-----C-T--ATATTTCAGAAC-TATT------------AGG---GAA-A-AGAGAAACACAGACA--C-CA-----------------GAAAC-C-CCAT-AATA-ACTGTGTGT-CTTAC-TCATC
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590778 134 - 189096842 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CT-----C-T--ATATTTCAGAAT-TATT------------AGG---GAA-A-AGAGAAACACAGATA--C-CA-----------------GAAAC-C-CCAT-AATA-ACTGTGCGT-CTTAC-TCATC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                               177 134 -     12329 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CT-----C-T--ATATTTCAGAAT-TATT------------AGG---GAA-A-AGAGAAACACAGATA--C-CA-----------------GAAAC-C-CCAT-AATA-ACTGTGTGT-CTTAC-TCATC
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002611  51 -  17673402 -------------------------------------------------------------------------------------------------------------------AGG---GAA-A-GGAGAAACAT-TATA--C-TT-----------------GAAAC-A-CAGT-AATA-ATG-----C-CTTAC-C-ATC
i Camelus_bactrianus.KN276810.1                          I 45 C 0
s Camelus_dromedarius.KN272107.1                           2335024 114 -   7040546 ATTGT-AAATAATAGCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCTG---A--ACA-C--A--GC-----CTC--T-C-T--ATA-------------T-------------GG---GAA-A-GGAGGAACAT-TATA--C-TT-----------------GAAAC-A-CAGT-AATA-ATG-----C-CTTAC-C-ATC
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  403308 127 -   1652518 ATTGT-AAATAATAGCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCTG---A--ACA-C--A--GC-----CTC--T-C-T--ATA-------------TTTCAGAATTAGTAGG---GAA-A-GGAGGAACAT-TATA--C-TT-----------------GAAAC-A-CAGT-AATA-ATG-----C-CTTAC-C-ATC
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17799344 133 -  60362399 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-ATTCTG---A--ACA-T--A--GC-----TTCC---C-T--ATATTTCAGGAT-TTAA------------AGG---GAA-A-AAAGGAACACAGAGA--C-CT-----------------GAAAC-C-CTAT-AATA-ATGATGTAT-CTTAG-C-ATT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                       92 133 -     43241 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-ATTCTG---A--ACA-T--A--GC-----TTCC---C-T--ATATTTCAGGAT-TTAA------------AGG---GAA-A-AAAGGAACACAGAGA--C-CT-----------------GAAAC-C-CTAT-AATA-ATGATGTAT-CTTAG-C-ATT
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034787 133 -   9314153 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-ATTCTG---A--ACA-T--A--GC-----TTCC---C-T--ATATTTCaggat-ttaa------------agg---gaa-a-aaaggaacacagaga--C-CT-----------------GAAAC-C-CTAT-AATA-ATGATGTAT-CTTAG-C-ATT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17959263 133 -  59632846 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-ATTCTG---A--ACA-T--A--GC-----TTCC---C-T--ATATTTCaggat-ttaa------------agg---gaa-a-aaaggaacacagaga--C-CT-----------------GAAAC-C-CTAT-AATA-ATGATGTAT-CTTAG-C-ATT
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18500564 133 +  63665305 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-ATTCTG---A--ACA-T--A--GC-----TTCC---C-T--ATATTTCaggat-ttaa------------agg---gaa-a-aaaggaacacagaga--C-CT-----------------GAAAC-C-CTAT-AATA-ATGATGTAT-CTTAG-C-ATT
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1228 128 -     12242 ATTCT-AAATAATGGTGGGAG-AG-AATTCATGCTTCTTTG-AAAAATCTA---A--G---C------C-----AT--GT-T-T-TATGTTTCAGAAA-T-AA------------AAG---AAA-A-GGAAGAACATGGATA--T-CT-----------------GAATC-T-CAGT-AACA-ATGATGTGT-C--AC-C-ACC
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 6
s Carlito_syrichta.NW_007259797.1                           156157 133 -    496798 AGTCT-AAAGAATAACTGGAG-AT-AATGCATGCTTCTCTG-GA-AACTGG---A--ACA-T--AGCCC-----CT-----T-C--ATATTTCAGAAT-TATT------------AAG---GAA-A-GATGGAACGTGGAAA--C-CT-----------------GAAAC-C-CAGT-GATA-ATGATGAGT-TTGAC-A-ATC
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5282 129 -     11696 ATTCC-ACACAATGGCCTGAG-AG-AATTCACACTTCTCTG-AA-AATCTG---A--ACA-C--G--GA-----CTC--T-C-T----CTTTCAGAAT-TCAC------------AGG---GAA-A-GGAGGAACACAGAGA--C-CT-----------------GAAAC-C-CAGT-AATA-ATGAT--GC-CTTAC-C-ATT
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137245 127 +    179628 ACTGT-AAATAATGGCTCAAG-AG-AATTCATATTTCTCTG-GA-AATTTA---A--A---C-TA--GT-----CTC--A-C-T--CTATTTCAGAAT-TAAT------------AGG---GAA-A-GGAAGAACACAGATA--C-CT-----------------GAGAC-C-CAGT----G-ATGATGTGT-C--AT-C-ATC
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     93237 133 +    217609 ATTCT-AAATAATGGCCTGAG-AG-AATTCGTGCTTCTCTG-AA-AATTTG---A--ACA-T--G--GC-----CT--TT-C-T--ATATTTCAGAAT-TAGT------------AGG---GAA-A-GGGGAAACATGGATA--C-CT-----------------GAAAT-G-CAGT-AATA-ATAAAGCGT-CTTAC-C-ATC
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                         10259 134 -     11392 ATTGT-AAAGAATGACCTGAG-AG-AATTAACGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CT-----C-T--ATATTTCAGAAT-TATT------------AGG---GAA-A-AGAGAAACACAGATA--C-CA-----------------GAAAC-C-CCAT-AATA-ACTGTGTGT-CTTAC-TCATC
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               6327 134 -      7577 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CT-----C-T--ATATTTCAGAAT-TATT------------AGG---GAA-A-AGAGAAACACAGATA--C-CA-----------------GAAAC-C-CCAT-AATA-ACTGTGTGT-CTTAC-TCATC
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25653054  73 +  26074798 --------------------------------------------------------------------------------------ATATTTCAGAAT-TATT------------AGG---GAA-A-AGAGAAACACAGACA--C-CA-----------------GAAAC-C-CCAT--ATA-CCTGTGTGT-CTTCC-CCATC
i Cebus_albifrons.Contig27                               I 58 C 0
s Cebus_olivaceus.k141_1764483                                 992  73 +     28840 --------------------------------------------------------------------------------------ATATTTCAGAAT-TATT------------AGG---GAA-A-AGAGAAACACAGACA--C-CA-----------------GAAAC-C-CCAT--ATA-CCTGTGTGT-CTTCC-CCATC
i Cebus_olivaceus.k141_1764483                           I 58 C 0
s Cebus_unicolor.k141_1837183                                  717  73 +     14051 --------------------------------------------------------------------------------------ATATTTCAGAAT-TATT------------AGG---GAA-A-AGAGAAACACAGACA--C-CA-----------------GAAAC-C-CCAT--ATA-CCTGTGTGT-CTTCC-CCATC
i Cebus_unicolor.k141_1837183                            I 58 C 0
s Cephalopachus_bancanus.k141_1423433                         5655 133 +     31688 AGTCT-AAATAATAACTGGAG-AT-AATGCATGCTTCTCTG-GA-AACTGG---A--ACA-T--AGCCC-----CT-----T-C--ATATTTCAGAAT-TATT------------AAG---GAA-A-GATGGAACGTGGAAA--C-CT-----------------GAAAC-C-CAGT-GATA-ATGATGAGT-TTGAC-A-ATC
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12231624 105 +  27778364 CTGGT-AAATAATGGCCCGAG-AG-GATTCACGCTTCTCTG-AC-AATCTG---A--ACA-C--A--GC-----CTC--T-C-T--ATATTTCAGAAT-CAAT------------AGG---GGA-A-GGAGGAACACGGGTA--C-CT-----------------GA-AC----------------------------------
i Ceratotherium_simum.JH767749.1                         C 0 I 27
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2651 105 -     25243 CTGGT-AAATAATGGCCCGAG-AG-GATTCACGCTTCTCTG-AC-AATCTG---A--ACA-C--A--GC-----CTC--T-C-T--ATATTTCAGAAT-CAAT------------AGG---GGA-A-GGAGGAACACGGGTA--C-CT-----------------GA-AC----------------------------------
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 I 27
s Cercocebus_atys.KQ010504.1                               4475849 133 +   4669795 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATA--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-GTC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                         353 133 +     17872 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATA--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-GTC
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           1010 133 -     14043 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATA--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-GTC
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9043 133 +     27781 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATA--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-GTC
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         9209 133 -     20310 ATTGT-AAAGAATGACCTAAG-AG-AATTAACGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATA--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-GTC
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          12189 133 +     29689 ATTGT-AAAGAATGACCTAAG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATA--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-GTC
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            6940 133 -     20078 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTCTG-AA-AATCTG---A--ACA-C--GGCCT-----CG-----C-C--ATATTTCAGAAC-TAAT------------AGG---GAA-A-AGGGAAACATGGATA--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-GTC
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          14857 133 -     27936 ATTGT-AAAGAATGACCTAAG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATA--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-GTC
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            3727 133 -     17152 ATTGT-AAAGAATGACCTAAG-AG-AATTAATGCCTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATA--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-ATC
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38817268 133 +  39242232 ATTGT-AAAGAATGACCTAAG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATA--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-GTC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21222958 133 -  21565898 ATTGT-AAAGAATGACCTAAG-AG-AATTAATGCCTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATA--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-ATC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40076 133 -     53127 ATTGT-AAAGAATGACCTAAG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGATACACGGATA--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-ATC
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                         327 133 +     13442 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATA--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-GTC
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       14876 133 -     27947 ATTGT-AAAGAATGACCTAAG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATA--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-GTC
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         14852 133 +     17596 ATTGT-AAAGAATGACCTAAG-AG-AATTAATGCCTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACAGATA--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-GTC
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                           899 133 +     14005 GTTGT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTCTG-AA-AATCTG---A--ACA-C--GGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACATAGATA--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-GTC
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             705 132 -      8501 ATTCT-AAATAATGGCCTGAC-AG-AATCCATGCTTCTCTG-AA-AATCTG---A--ACA-C--A--GC-----CGC--T-C-T--GTATGTCAAAAT-TAAT------------AGG---GTA-C-AGAGGAGCATGGATA--C-CT-----------------GAAAC-C-CATA-ACC--ATATCGTGT-TTTAC-C-AGC
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             21230 131 -     52598 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCTG---A--ACA-C--A--CT-----CT-----C-T--ATATTTCAGAAT-TAAT------------TGG---AAA-A-GGATGAACATGGATA--C-CC-----------------GAAAC-T-CAGT-AATA-ATGATGTGT-CTCAC-C-ATC
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16595 131 +     57038 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCTG---A--ACA-C--A--CT-----CT-----C-T--ATATTTCAGAAT-TAAT------------TGG---AAA-A-AGAGGAACGTGGATA--C-CC-----------------GAAAC-C-CAGT-AATA-ATGATGTGT-CTCAC-C-ATC
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1252974 131 +   2543920 ATTCT-AAACAATCGTGGGAG-AG-AATTCATGCTCCTTTG-AA-AATCTG---A--A---T--A--CA-----GTC--T-C-TC-ATatttcagaag-t-aa------------aaaaaaaaa-a-ggaagaacatg-gtA--C-CT-----------------GAGTC-T-CAGT-AATA-ATGATGTGT-C--AT-C-ATG
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2206961                            525 134 -     15524 ATTAT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTG-AG-AATCTG---A--ACA-C--AGCCT-----CT-----C-T--ATATTTCAGAAG-TATT------------AGG---GAA-A-AGAGAAACACAGATA--C-CA-----------------GAAAC-C-CCAT-AATA-ACTGTGTGT-CTTCC-TCATC
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18428836 133 -  18827391 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATA--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-ATC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15273 133 -     50209 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCAT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATA--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-ATC
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422273 133 + 135778131 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATA--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-ATC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 18485  80 +     19366 ATTCT-AAGTAATGGCCTGTT-AG-AATCTATGCTTCTCTG-AA-AATCTG---A--ACA-C--T--GC-----CCC--T-C-T--GTATTTCAGAAT-TAGT------------AGG---G----------------------------------------------------------------------------------
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 I 37
s Choloepus_hoffmanni.KN194906.1                            173562  80 +    839153 ATTCT-AAGTAATGGCCTGTT-AG-AATCCATGCTTCTCTG-AA-AATCTG---A--ACA-C--T--GC-----CCC--T-C-T--GTATTTCAGAAT-TAGT------------AGG---G----------------------------------------------------------------------------------
i Choloepus_hoffmanni.KN194906.1                         C 0 I 37
s Colobus_angolensis.KN981557.1                            1910786 133 +   2368649 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTGCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----TG-----C-C--GTATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATA--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-GTC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949038 133 + 200372422 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTGCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----TG-----C-C--GTATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATA--C-CT-----------------GAAAC-C-CTAT-AGTA-ATTATGTGT-CTTAC-C-GTC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37320 133 +     84244 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTGCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----TG-----C-C--GTATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATA--C-CT-----------------GAAAC-C-GTAT-AATA-ATGATGTGT-CTTAC-C-GTC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17548262 119 -  53390261 ATTCTGAAATAATGGCCT-AG-AG-AATTCATGACTGTCTG-AA-AATCAG---A--ACA-C--A--GCCAATTTTC--A-C-T--ACATATCAAAAT-TAAT------------AGG---GGA-A-G------CATGGATA--C-C------------------ACAGT-C-CAGT-AGTG-ATGGCA---------------
i Condylura_cristata.JH655891.1                          C 0 I 1
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14636  72 -     20389 -----------------------------------------------------------------------------------A---TATTTCAGGGT-TAAT------------AGG---GAA-A--AAGGAACATGGATA--C-TT-----------------GAAAT-C-CAAT-AATA-ATGATGTGT-CTTAC-C-ATC
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 58 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 50360 125 +     63868 ATTTT-AAACAATGGCCCAAG-AG-AATTCATGCAGCCCTG-AA-AATCTG---A--A---C--A--GA-----CCC--A-A-G--ATGTTTCAGAAT-TAAT------------GAA---GAA-A-G----GATAGAGATA--C-CT-----------------GAGAC-T-CAGT-CGTA-CTGATGTGT-C--AC-C-ATC
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11667713 124 + 224834208 ATTCT-GAACAGT-GCCCAAG-AG-AATCCACACTGCCCTG-AA-AATCTG---A--A---C--A--GA-----CCC--A-C-A--ATGTTTCAGAAT-TAAC------------AAG---GCA-A-G----GGCAGAGATA--C-CT-----------------GAAAC-T-TAGT-CATA-AAAGTGTTT-C--AC-C-ATC
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               3176 114 -     19598 ------------TGGCCCAAG-AG-AATC-TCACTGCCCCA-AA-AATCTA---A--ACA-C--A--AT-----ATC--A-T-T--ATGTTTCAAAAT-TAAT------------AGG---AAA-A-GGGATGACATAAGCA--C-AT-----------------GAAAA-T-CATA-AATG-AT---GTGA-CTTAC------
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 I 3
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28666 133 -     87169 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-TA-ATCCTG---A--ACA-G--A--GC-----CTCC---C-T--AGATTTCAGAAT-TTAA------------AGG---CAA-A-GAAGGAACACAGATA--C-CT-----------------GAACC-C-CTGT-AATA-ATGACATAT-CTTAC-C-ATC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837244 129 +   1526836 ATTCT-AAATAATGGCCTGCG-AG-GATTTATGCTTCTCTG-AA-AATCTG---A--A---C--A--GT-----CT--GT-C-T--GTATTTCAGAAT-TAAT------------AGG---GAA-A-GAGAGAACACGGACA--C-CT-----------------GAAAC-C-CAGG-AACA-ACAATGTGT-C--AC-A-GCC
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  36098 130 +     51376 ATTTT-AAATAATGGTGGGAG-AG-AATTCATGCTTTTTTG-AAAAATCTA---A--G---C--G--CA-----AT--GT-T-T-TATATTTCAAAAG-T-GA------------AGG---AAA-A-GGAAGAAAATGAGTA--T-CT-----------------GAATG-T-CAAT-AACA-ATGATGTAT-C--AA-C-ATC
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 168 C 0
s Dasypus_novemcinctus.JH564415.1                            63712 132 +   2246927 ATTCT-AAATAATGGCCTGAT-AG-AATTCATGCTTCTCTG-AA-AATCTG---A--ACA-C--A--GC-----CTC--T-C-T--GTCTGTCAAAAT-TAAT------------AGG---GAA-C-AGAGGACCAAGGGTA--C-CT-----------------GACAT-C-CAGT-AAC--ACATCATGG-TTTAC-C-ATC
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537509  75 -  12879189 ---------------------------------------------------------------------------------C-T--ATATTTCAGAAT-TAAT------------TGG---GAA-A-GGAGGAGCGTGGATA--C-CT-----------------GAAGC-C-CAGT-AATA-ATGCTGTAT-CTTGC-C-ATC
i Daubentonia_madagascariensis.ctg71                     I 52 C 0
s Desmodus_rotundus.KZ672289.1                             8630358  70 +  20541912 ---------------------------------------------------------------------------------------TCTTTCAGATT-TCAT------------AGA---GAA-A-GGAGGAACACGGAGA--C-CT-----------------GAAAC-C-CAGT-AATA-ATGAT--GT-CTTAC-C-ATT
i Desmodus_rotundus.KZ672289.1                           I 59 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673475 105 +   1390856 CTGGT-AAATAATGGCCTGAG-AG-GCTTCATGCTTCTCTG-AC-AATCTG---A--ACA-C--A--GC-----CTC--T-C-T--ATGTTTCAGAAT-CAAT------------AGG---GGA-A-GGAGGAACACGGATA--C-CT-----------------GA-AC----------------------------------
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 27
s Diceros_bicornis.DicBicMic_scaffold_5955                    6224 105 +    198055 CTGGT-AAATAATGGCCCGAG-AG-GATTCACGCTTCTCTG-AC-AATCTG---A--ACA-C--A--GC-----CTC--T-C-T--ATATTTCAGAAT-CAAT------------AGG---GGA-A-GGAGGAACACGGGTA--C-CT-----------------GA-AC----------------------------------
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 27
s Dinomys_branickii.DinBra_scaffold_21862                    36614  77 +     67921 -------------------------------------------------------------C--A--CA-----GTC--T-C-T-TGTATTTCAGAAG-T-AA------------AGG---AAA-A-GGAAGAACATG-ATA--C-CT-----------------GCATC-T-CAGT-AATA-A---TGTGT-C--AT-C-ATC
i Dinomys_branickii.DinBra_scaffold_21862                I 46 C 0
s Echinops_telfairi.JH980293.1                            48780741 150 + 111700974 AATCT-AAGTAATGACCTGAG-AG-AATTTGAACTTCTCTG-AA-ACCCTA---A--CCA-C--A--AT-----CTC--T-C-A--ATATTTTAGAAT-TCAT------------AGG---GAA-G-GGAGGAATGTGGATA--C-CTTCCTGAAACTCAGTAATATAAC-T-CAGT-AATA-ATGGCCTAC-TTTAG-C-GTC
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.KE759718.1                                  10700 133 +     11740 ATTCT-AAATAATGGCCTGAG-AG-AATTCGTGCTTCTCTG-AA-AATCTG---A--ACA-C--A--GG-----CTC-tc-t-t---tatttcagaat-taat------------AGG---TAA-A-GGAGAAACATAGATA--C-CT-----------------GAAAC-A-CAAT-AGTA-ATGATGTAT-CTTGC-C-ATC
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1097821 132 +  10337057 ATTCC-AAATAATGACCTGAG-AG-AATCCATGCTTCTCTG-AA-AATCAG---C--ACG-C--A--GA-----CTC--T-C-T--ATATTTCAGAAA-TAAT------------AGG---GGA-G-AGAGGAACGTGGATA--C-CT-----------------GACAC-C-C-TT-AATA-GTGACCTAC-TTTAC-C-ATC
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          20447  76 -    110024 TTTCT-AAACAGT-GCCCCAG-AG-AATCCATGTTGCCCTG-AG-AATCTG---A--G---C--A--GA-----ACC--A-A-A--ATGCTTCATAAT-TAGC------------AAG--------------------------------------------------------------------------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 38
s Ellobius_talpinus.LOJH01081419.1                             578  76 +      8657 TTTCT-AAATAGT-GCACCAG-AG-AATCCATGTTGCCCTG-AG-AATCTG---A--G---C--A--GA-----ACC--T-A-A--ATGCTTCAGAAT-TAAC------------AAG--------------------------------------------------------------------------------------
i Ellobius_talpinus.LOJH01081419.1                       C 0 I 38
s Enhydra_lutris.KZ291758.1                               16329487 105 -  41312741 ATTCT-AAATAATGGCC--AG-AG-AATTCATACTTCTCTG-CA-ATTCTG---A--ACA-C--A--GT-----CTC--T-C-T-AATATTTCGGGAT-TTTA------------AGG---GGA-A-GAAGGAACACTGATA--C-CT-----------------AAAAC----------------------------------
i Enhydra_lutris.KZ291758.1                              C 0 I 35
s Eptesicus_fuscus.JH977646.1                              2145902 133 -  14770903 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCTG---A--ACA-C--A--GC-----CGC--T-C-C--ATATGTCAGCAT-TAAT------------AGG---GAA-A-GGAGGAACATGGATA--C-CT-----------------GAAAC-C-CAGT-AATA-ACGATGTGT-CTCAC-C-ATC
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1283729 106 +   4378816 ATTAC-AAATAATAGCCTCAA-AG-GATGCGTGCTTCTCTG-AA-AATCTG---A--ACA-C--A--GC-----CTC--T-C-T--ATATTTCAGAAT-TAAT------------AGG---GAA-A-GGAGGAACATGGATA--C-CT-----------------GAAAC----------------------------------
i Equus_asinus.JREZ01000139.1                            C 0 I 26
s Equus_caballus.CM000403.2                               18531549 106 -  39960074 ATTAC-AAATAATAGCCTCAA-AG-GATGCGTGCTTCTCTG-AA-AATCTG---A--ACA-C--A--GC-----CTC--T-C-T--ATATTTCAGAAT-TAAT------------AAG---GAA-A-GGAGGAACATGGATA--C-CT-----------------GAAAC----------------------------------
i Equus_caballus.CM000403.2                              C 0 I 26
s Equus_przewalskii.KK951119.1                               33578 106 +    498745 ATTAC-AAATAATAGCCTCAA-AG-GATGCGTGCTTCTCTG-AA-AATCTG---A--ACA-C--A--GC-----CTC--T-C-T--ATATTTCAGAAT-TAAT------------AAG---GAA-A-GGAGGAACATGGATA--C-CT-----------------GAAAC----------------------------------
i Equus_przewalskii.KK951119.1                           C 0 I 26
s Erinaceus_europaeus.JH835339.1                           3328404  84 -   7059049 ATTCT-ACAT-ATGGTCTGTG-AG-AATTCATGTTTCTCT--AA-AATTTA---A--ACA-T--A---T-----CTC--A-c-t--acatttta-aat-taat------------aat---taa-t-a------tata------------------------------------------------------------------
i Erinaceus_europaeus.JH835339.1                         C 0 I 17
s Erythrocebus_patas.Contig38                             21205441 133 -  21539334 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGGAACATGGATA--C-CT-----------------GAAAC-C-CCAT-AATA-ATTATGTGT-CTTAC-C-GTC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_576796                              40275 131 -     44621 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCTG---A--ACA-C--A--CT-----CT-----C-T--ATATTTCATAAT-TAAT------------TGG---AAA-A-GGAGGAACGTGGATA--C-CT-----------------GAAAC-C-CAGT-AATA-ATGATGTGT-CTCAC-C-ATC
i Eulemur_albifrons.k141_576796                          n 131 I 32
s Eulemur_collaris.k141_377015                                6656 131 -     16928 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCTG---A--ACA-C--A--CT-----CT-----C-T--ATATTTCATAAT-TAAT------------TGG---AAA-A-GGAGGAACGTGGATA--C-CT-----------------GAAAC-C-CAGT-AATA-ATGATGTGT-CTCAC-C-ATC
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15688 131 -     25546 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCTG---A--ACA-C--A--CT-----CT-----C-T--ATATTTCATAAT-TAAT------------TGG---AAA-A-GGAGGAACGTGGATA--C-CT-----------------GAAAC-C-CAGT-AATA-ATGATGTGT-CTCAC-C-ATC
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            12884 131 +     26330 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCTG---A--ACA-C--A--CT-----CT-----C-T--ATATTTCAGAAT-TAAT------------TGG---AAA-A-GGAGGAACGTGGATA--C-CT-----------------GAAAC-C-CAGT-AATA-ATGATGTGT-CTCAC-C-ATC
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14119 131 +     23973 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCTG---A--ACA-C--A--GT-----CT-----C-T--ATATTTCATAAT-TAAT------------TGG---AAA-A-GGAGGAACGTGGATA--C-CT-----------------GAAAC-C-CAGT-AATA-ATGATGTGT-CTCAC-C-ATC
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                12881 131 +     75513 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCTG---A--ACA-C--A--CT-----CT-----C-T--ATATTTCAGAAT-TAAT------------TGG---AAA-A-GGAGGAACGTGGATA--C-CT-----------------GAAAC-C-CAGT-AATA-ATGATGTGT-CTCAC-C-ATC
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10811 131 +     97555 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCTG---A--ACA-C--A--CT-----CT-----C-T--ATATTTCATAAT-TAAT------------TGG---AAA-A-GGAGGAACGTGGATA--C-CT-----------------GAAAC-C-CAGT-AATA-ATGATGTGT-CTCAC-C-ATC
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              302 131 +     13026 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCTG---A--ACA-C--A--CT-----CT-----C-T--ATATTTCAGAAT-TAAT------------TGG---AAA-A-GGAGGAACGTGGATA--C-CT-----------------GAAAC-C-CAGT-AATA-ATGATGTGT-CTCAC-C-ATC
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4355 131 -     17153 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCTG---A--ACA-C--A--CT-----CT-----C-T--ATATTTCATAAT-TAAT------------TGG---AAA-A-GGAGGAACGTGGATA--C-CT-----------------GAAAC-C-CAGT-AATA-ATGATGTGT-CTCAC-C-ATC
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              13928 131 +    111500 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCTG---A--ACA-C--A--GT-----CT-----C-T--ATATTTCATAAT-TAAT------------TGG---AAA-A-GGAGGAACGTGGATA--C-CT-----------------GAAAC-C-CAGT-AATA-ATGATGTGT-CTCAC-C-ACC
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237122 133 + 206538554 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-TA-ATTCTG---A--ACA-C--A--GC-----CTC--T-C-T--AGATTTCaggat-ttaa------------agg---gaa-a-aaaggaacacAGATA--C-CT-----------------GAAGC-C-CTAT-AATA-ATGATTTAT-CTTAC-C-ATC
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20195965 133 + 205367284 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-TA-ATTCTG---A--ACA-C--A--GC-----CTC--T-C-T--AGATTTCaggat-ttaa------------agg---gaa-a-aaaggaacacAGATA--C-CT-----------------GAAGC-C-CTAT-AATA-ATGATTTAT-CTTAC-C-ATC
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  9718 133 -     36744 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-TA-ATTCTG---A--ACA-C--A--GC-----CTC--T-C-T--AGATTTCAGGAT-TTAA------------AGG---GAA-A-AAAGGAACACAGATA--C-CT-----------------GAAGC-C-CTGT-AATA-ATGATTTAT-CTTAC-C-ATC
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             850602 130 +   3816255 AGTCT-AAATAATGGTCTG-TGAG-AATTCATGGTTCTTTG-AA-AAT---CTGA--A---C--A--GA-----GTC--T-T-TCTACATTtcagaat-t-aa------------agg---aaa-a-ggTAGGACATGGGTA--T-CT-----------------GCATC-C-TAGT-AATA-ATGATGTGT-C--AC-C-GTC
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg2040                                     426774 131 -    453645 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCCTCTCTG-AA-AATCTG---A--ACA-C--A--CT-----CT-----C-C--ATATTTCAGAAT-TAAT------------TGG---GAA-A-GGAGGAACATGGATA--C-CT-----------------GTAAC-C-CAGC-AATA-ATGATGTGT-CTCAC-C-ATC
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4464 131 +     11339 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCCTCTCTG-AA-AATCTG---A--ACA-C--A--CT-----CT-----C-C--ATATTTCAGAAT-TAAT------------TGG---GAA-A-GGAGGAATATGGATA--C-CT-----------------GTAAC-C-CAGC-AATA-ATGATGTGT-CTCAC-C-ATC
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            1762 131 +     41679 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCTG---A--ACC-C--A--CT-----CT-----C-C--ATATTTCAGAAT-TAAT------------TGG---GAA-A-GGAGGAACATGGATA--C-CT-----------------GAAAC-C-CAGC-AATA-ATGATGTGT-CTCAC-C-ATC
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1357 133 -      9135 ATTCT-AAATAAGGGCCTGAG-AG-AATTCATGCTGCTCCA-AA-AATCTG---A--ACA-G--A--CT-----CT--GT-C-T--ATATTTCAGAAT-TAAT------------AAG---GAA-A-GGAGAAACATGGACA--C-CT-----------------GAAAC-C-CAGT-AATA-ATAATGTGT-CTTGC-C-ATC
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            31572  79 +     49224 ----------------------------------------------------------------T--AC-----CTC--T-C-T--ATAGTTCAGA-T-TAAT------------AGG---GAA-A-AGAAGAACATGGATA--C-CT-----------------GAAAC-C-CAAT-AATA-ATGATGTGT-C--AC-T-GTG
i Glis_glis.GliGli_scaffold_19807                        I 46 C 0
s Gorilla_beringei.k141_3596273                              16246 132 -     32273 ATTGT-AAAGAATGACCTGAG-AG-AATTAGTGCTTCTTTG-AA-A-TCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACAGATT--C-CT-----------------GAAAC-C-CCAT-AATA-ATTATGTGT-ATTAC-C-ATC
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186338383 132 + 186649187 ATTGT-AAAGAATGACCTGAG-AG-AATTAGTGCTTCTTTG-AA-A-TCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACAGATT--C-CT-----------------GAAAC-C-CCAT-AATA-ATTATGTGT-ATTAC-C-ATC
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   32767 134 +     78134 ATTCT-AACTAATGACCCAAG-AG-CATCAATGCCTCCTTG-AA-CATCTG---ANNA--GCACA--GC-----CTC--T-C-T--ATATTTCAGA-T-TAAT------------AAG---AAA-A-GGAAGAACATGGATA--C-CT-----------------GAAAC-C-AAAT-AATA-ATGAAGTGTTC--AC-C-GTC
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           6987 131 -     19426 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCTG---A--ACA-C--A--CT-----CT-----C-T--ATATTTCAGAAT-TAAT------------TGG---AAA-A-GGAGGAACGTGGATA--C-CT-----------------GAAAC-C-CAGT-AATA-ATGATGTGT-CTCGC-C-ATC
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12136 131 -     15286 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCTG---A--ACA-C--A--CT-----CT-----C-T--ATATTTCAGAAT-TAAT------------TGG---AAA-A-GGAGGAACGTGGATA--C-CT-----------------GAAAC-C-CAGT-AATA-ATGATGTGT-CTCGC-C-ATC
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13775 131 +     18253 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCTG---A--ACA-C--A--CT-----CT-----C-T--ATATTTCAGAAT-TAAT------------TGG---AAA-A-GGAGGAACGTGGATA--C-CT-----------------GAAAC-C-CAGT-AATA-ATGATGTGT-CTCAC-C-ATC
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         13876 131 -     41752 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCTG---A--ACA-C--A--CT-----CT-----C-T--ATATTTCAGAAT-TAAT------------TGG---AAA-A-GGAGGAACGTGGATA--C-CT-----------------GAAAC-C-CAGT-AATA-ATGATGTGT-CTCGC-C-ATC
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13713 131 -     16460 ATTCT-AAATAATGCCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCTG---A--ACA-C--A--CT-----CT-----C-T--ATATTTCAGAAT-TAAT------------TGG---AAA-A-GGAGGAACGTGGATA--C-CT-----------------GAAAC-C-CAGT-AATA-ATGATGTGT-CTCGC-C-ATC
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242500 133 +    327341 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTTTCTG-TA-ATCCTG---A--ACA-G--A--GC-----CTC--T-C-T--AAATTTCAGAAT-TTAA------------AGG---CAA-A-GAAGGAACACAGATT--C-AT-----------------GAACC-C-CTGT-AATA-ATGATGTAT-CTTAC-C-ATC
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20662414  84 +  22651954 ------------------------------------------------------A--A---C--A--CA-----GTC--T-C-TCTACatttcagaat-t-aa------------aag---aaa-a-ggaaggacatAGATA--C-CT-----------------GAATC-C-CAGT-AACA-ATAATATGT-C--AC-C-ATC
i Heterocephalus_glaber.JH602082.1                       I 23 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1057 133 +      7595 GTTCT-AAATAATGACCTGAG-AG-AATTCACGCTTCCCTG-GA-AATTTG---A--GCA-C--T--GC-----CTC--G-C-T--ATAATTCAGAAT-TAAT------------AGG---GAA-A-GGAGAAGCATGAATA--C-TC-----------------AAAAT-G-CAGT-AATA-ACCACCTAC-TTTAG-C-AAC
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hoolock_leuconedys.ctg274                                    435045 133 +    630532 ATTGT-AAAGAATGACCTGAG-AG-AATTAGTGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACAGATA--C-CT-----------------GAAAC-A-CCAT-AATA-ATTACGTGT-ATTAC-C-ATC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45194 133 +     55795 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCGTCTCTG-TA-ATTCTG---A--ACA-C--A--GC-----CTC--T-C-T--AGATCTCAGAAT-TTAA------------AGA---CAA-A-GAAGGAACACAGATA--C-CT-----------------GAACC-C-CTGT-AATT-ATGATGTAT-CTTAC-C-ATC
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83280 122 +    135385 AGTCT-GTGTAATGATCTGAT-AG-CAATCATGCTTCTTTG-AA-AATATG---A--A---C--A--CA-----GTC--T-C-T--ATATTTCAGAAT-T-AA------------AAG---AAA-A-GAAAGATCATGGGTA--C-CT-----------------GAATC-T-CAGT-AATA-ATGATGTGT-C----------
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7521051 131 -   7955117 AGTCT-AAATAATGACCCAAG-AG-AATTCATGCTTCTCTG-AA-ATTCTG---A--A---CATG--GT-----CTC--T-C-T--ATATTTCAGAAT-TAAT------------AGG---GAA-A-GGAAAAACATGGATA--C-CT-----------------AAAAC-C-CAGT-AATA-ATGATGTGC-C--AC-C-ATT
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   22676 128 +     31101 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCTG---A--ACA-C--A--CT-----CT-----C-T--ATATTTCAGAAT-TAAT------------TGG---AAA-A-GGAGGAATGTGGATA--C-CT-----------------GAAAC-C-CAGT-AAT----GATGTGT-CTTAC-C-ATC
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8276958 130 -   9596543 GTTCT-AAATAATGGCTCAAG-AG-AACTCATGCATCCCTG-AA-AAGCTG---A--A---TACA--GT-----CTC--A-C-T--ATATTTCAGAAT-TAAT------------AGG---GA--A-GGAAGACCAGGGATA--C-CT-----------------GAAAC-C-CAGC-CACA-ATGATTTCC-C--AT-C-GTC
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    16547 133 -     42476 AGTCT-AAATAATGGCCTGAG-AG-AATTCATTCTCCTCTG-AA-AACCTG---A--ACA-C--G--GC-----TGC--T-C-C--AGGTGTCAGCAT-TAAT------------AGG---GAA-A-GGAGGGACATGGCTA--C-CT-----------------GAGAC-C-CAGA-AATA-ATGATGTGT-CTCAC-C-ATC
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15524228 131 -  30322482 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCTG---A--ACA-C--A--CT-----CT-----C-T--ATATTTCAGAAT-TAAT------------TGG---AAA-A-GGAGGAACGTGGATA--C-CT-----------------GAAAC-C-CAGT-AATA-ATGATGTGT-CTCAC-C-ATC
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        7903 134 +     64341 ATTAT-AAAGAATGACCTGAG-AG-AATTAATGTTTCTTTG-AG-AATCTG---A--ACA-C--AGCCT-----CT-----C-T--ATATTTCAGAAG-TATT------------AGG---GAA-A-AGAGAAACACAGATA--C-CA-----------------GAAAC-T-CCAT-AATA-ACTGTGTGT-CTTAC-TCATC
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                            243 134 -     35062 ATTAT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTG-AG-AATCTG---A--ACA-C--AGCCT-----CT-----C-T--ATATTTCAGAAG-TATT------------AGG---GAA-A-AGAGAAACACAGATA--C-CA-----------------GAAAC-T-CCAT-AATA-ACTGTGTGT-CTTAC-TCATC
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        7931 134 +     35603 ATTAT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTG-AG-AATCTG---A--ACA-C--AGCCC-----CT-----C-T--ATATTTCAGAAG-TATT------------AGG---GAA-A-AGAGAAACACAGATA--C-CA-----------------GAAAC-C-CCAT-AATA-ACTGTGTGT-CTTAC-TCATC
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    29347 134 +     38576 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CT-----C-T--ATATTTCAGAAT-TATT------------AGG---GAA-A-AGAGAAACACAGATA--C-CA-----------------GAAAC-C-CCAT-AATA-ATTGTGTGT-CTTAC-TCATC
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         26047 134 +     66356 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTTCCTTG-AA-AATCTG---A--ACA-C--AGCCT-----CT-----C-T--ATATTTCAGAAT-TATT------------AGG---GAA-A-AGAGAAACACAGATA--C-CA-----------------GAAAC-C-CCAT-AATA-ATTGTGTGT-CTTAC-TTATC
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         11120 131 -     23766 ATTCT-AAATAATAGCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCTG---A--ACA-C--A--CT-----CT-----C-T--ATATTTCAGAAT-TAAT------------TGG---AAA-A-GGAGGAACGTGGATA--C-CT-----------------GAAAC-T-CAGT-AATA-ATGATGTGT-CTCAC-C-ATC
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29181 131 +     45836 ATTCT-AAATAATAGCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCTG---A--ACA-C--A--TT-----CT-----C-T--ATATTTCAGAAT-TAAT------------TGG---AAA-A-GGAGGAACATGGATA--C-CT-----------------GAAAC-T-CAGT-AATA-ATGATGTGT-CTCAC-C-ATC
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1719 131 +     25010 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCTG---A--ACA-C--A--CT-----CT-----C-T--ATATTTCAGAAT-TAAT------------TGG---AAA-A-GGAGGAACGTGGATA--C-CT-----------------GAAAC-T-CAGT-AATA-ATGATGTGT-CTCAC-C-ATC
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27117 131 +     54090 ATTCT-AAATAATAGCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCTG---A--ACA-C--A--CT-----CT-----C-T--ATATTTCAGAAT-TAAT------------TGG---AAA-A-GGAGGAACGTGGATA--C-CT-----------------GAAAC-C-CAGT-AATA-ATGATGTGT-CTCAC-C-ATC
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3043275  84 +   3914936 ----------------------------------------------------------------A--GC-----CTC--T-C-T-ACTATTTCAGGAT-TTaa------------agg---gga-a-gaaggaacagAGATA--C-CT-----------------GAAAC-C-CTGT-AATA-ATGATGTAT-CTTCCCC-CTC
i Leptonychotes_weddellii.KB714746.1                     I 49 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6648 133 -     14121 ATTCT-AAGTAATGGCCTGAG-AG-AATCCATGCTTCTCTG-AA-AATCTG---A--ACA-C--A--GT-----CTC--T-C-T--ATATTTCATAAT-TAAT------------AGG---GAA-A-AGAGGAACATGGGTA--C-CT-----------------AACAC-C-TAGT-AATA-ATGACCTGT-CTTAC-C-AGC
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437394 133 +   1826925 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATA--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-GTC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            6023 131 +     11245 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCCTCTCTG-AA-AATCTG---A--ACA-C--A--CT-----CT-----C-C--ATATTTCAGAAT-TAAT------------TGG---GAA-A-GGAGAAACATGGATA--C-CT-----------------GAAAA-C-CAGC-AATA-ATGATGTGT-CTCAC-C-ATC
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004843 131 +   6120653 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCCTCTCTG-AA-AATCTG---A--ACA-C--A--CT-----CT-----C-C--ATATTTCAGAAT-TAAT------------TGG---GAA-A-GGAGAAACATGGATA--C-CT-----------------GAAAA-C-CAGC-AATA-ATGATGTGT-CTCAC-C-ATC
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4217488 132 -  43346337 ATTCT-AAATAATGGCCTGTG-AG-AATTCATGCTGCCCTG-GA-AATCTG---A--GCA-C--A--GC-----CTC--T-G-T--ATGTTTCAGAGT-TAAT------------AGG---GAA-A-GGAGGAACAT-AATA--C-CC-----------------GAAAT-G-CAGT-AATA-ATGACCTAC-TTTAC-T-GTC
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17955503 133 -  59628241 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-ATTCTG---A--ACA-T--A--GC-----TTCC---C-T--ATATTTCaggat-ttaa------------agg---gaa-a-aaaggaacacagaga--C-CT-----------------GAAAC-C-CTAT-AATA-ATGATGTAT-CTTAG-C-ATT
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               7207 133 +     40492 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTA-AA-AATCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATG--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-GTC
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59676466 133 +  60120075 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTA-AA-AATCTG---A--ACA-C--AGCCT-----TG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATG--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-GTC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 12982 133 -     26193 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTA-AA-AATCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTTAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATG--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-GTC
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            80766 133 -    114318 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTA-AA-AATCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATG--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-GTC
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  6453 133 -     23192 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTA-AA-AATCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATG--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-GTC
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                15926 133 -     29190 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTA-AA-AATCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATG--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-GTC
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  24491 133 +     37952 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTA-AA-AATCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATG--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-GTC
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186839580 133 + 187317192 ATTGT-AAAGAATGACCTGAG-AG-Aattaatgcttcttta-aa-aatctg---a--aca-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATG--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-GTC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458143 133 -  25927173 ATTGT-AAAGAATGACCTGAG-AG-AATTAATgcttcttta-aa-aatctg---a--aca-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATG--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-GTC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  80339 133 +     89720 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTA-AA-AATCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATG--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-GTC
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 7340 133 +     20474 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTA-AA-AATCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATG--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-GTC
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   7140 133 -     14993 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTA-AA-AATCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATG--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-T-GTC
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  330006 133 -    668171 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTA-AA-AATCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATG--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-GTC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 5453 133 -     24072 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTA-AA-AATCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACATGGATG--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-GTC
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26078 133 -     45290 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTA-AA-AATCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATG--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-GTC
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90793 132 +     94391 ATTCT-AAATAATGCCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCTG---A--ACA-C--A--GC-----CTC--A-T-T---TATTTCAGAAT-TAAT------------AAG---GAA-A-GGAGGAACATAGATA--C-CT-----------------AAAAC-A-CAAT-AGTA-ATGATGTAT-CTTGT-C-ATC
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23937669 133 -  24302211 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATA--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-GTC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               351793 133 +    752769 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATA--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-GTC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              18677 104 +    737560 ATTCT-AAATAATGGCCTGAG-AG-AATTTGTGCTTCTCTG-AA-AATCTG---A--TCA-C--A--GC-----CTC--T-C-T--ACATTTCAGAAT-TAAT------------AGG---GAA-A-TGATGAACATGGATA--C-CT-----------------GAA------------------------------------
i Manis_javanica.JSZB01003497.1                          C 0 I 26
s Manis_pentadactyla.KN006162.1                              50670 104 -    317179 ATTCT-AAATAATGGCCTGAG-AG-AATTCGTGCTTCTCTG-AA-AATCTG---A--TCA-C--A--GC-----CTC--T-c-t--acatttcaaaat-taat------------agG---GAA-A-TGATGAACATGGATA--C-CT-----------------GAA------------------------------------
i Manis_pentadactyla.KN006162.1                          C 0 I 26
s Marmota_marmota.CZRN01000018.1                          33103250 131 -  40650429 AGTCT-AAATAATGGCCCAAG-AG-AATTCATGCTTCTCTG-AA-ATTCTG---A--A---CATG--GT-----CTC--T-C-T--ATATTTCAGAAT-TAAT------------AGG---GAA-A-GGAAAAACATGGATA--C-CT-----------------AAAAC-C-CAGT-AATA-ATGATGTGC-C--AC-C-ATT
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        10614 133 -    207569 ATTCT-AAATAATGACCTGAG-AG-AATTTATGCTTCTCTG-AA-AATCTG---A--ACA-C--A--GC-----CTC--T-TTG---TATTTCAGAAT-TAAC------------AGG---GAA-A-CAAGGAACATGGATA--C-TT-----------------GAAAT-C-GGAT-AATA-ATGATGTGT-CTTAC-C-ATC
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10224 107 +     13704 ATTCT-GAATAATGGCCTGAG-AG-AATTCATACTTCTCTG-CA-ATTCTG---A--ACA-C--A--GT-----CTC--T-C-T-AACATTTCAGGAT-TTAA------------AGG---GGA-A-GAAGGAACACTGACA--C-CT-----------------AAAAC----------------------------------
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 35
s Meriones_unguiculatus.MerUng_scaffold_7390                 32899 127 +    140813 ATTCT-GAAAACTGGCTCAAG-AG-GATCCATGCTGCCCTA-AA-AATTTG---G--A---C--A--GA-----TCC--A-T-G--ATGTTTCAGATT-TCAC------------AAG---GGA-ATA----AACATGGAAA--CTCA-----------------GAAAC-T-CAGT-CCTA-ACATTGTGT-C--AC-C-ATC
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12182388 124 -  29670104 ATTCT-AAACAGT-GCCCAAG-AG-AACCCATGCTGCCCTG-AA-AACCTG---A--A---C--A--GA-----CCC--A-C-A--ATGTTTCAGAAT-TAAT------------AAG---GCA-A-G----GGCAGGGATA--C-CT-----------------GAAAC-T-CAGT-CATA-ATGGTGTGT-C--AC-C-ATA
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                6138 134 -      7380 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CT-----C-T--ATATTTCAGAAT-TATT------------AGG---TAA-A-AGAGAAACACAGATA--C-CA-----------------GAAAC-C-CCAT-AATA-ACTGTGTGT-CTTAC-TCATC
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_2457295                                367 134 +      1079 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CT-----C-T--ATATTTCAGAAT-TATT------------AGG---GAA-A-AGAGAAACACAGATA--C-CA-----------------GAAAC-C-CCAT-AATA-ACTGTGTGT-CTTAC-TCATC
i Mico_humeralifer.k141_2457295                          C 0 C 0
s Mico_schneideri.k141_1950671                                      6150 134 -      7356 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CT-----C-T--ATATTTCAGAAT-TATT------------AGG---TAA-A-AGAGAAACACAGATA--C-CA-----------------GAAAC-C-CCAT-AATA-ACTGTGTGT-CTTAC-TCATC
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18291654 131 -  93316391 ATTCT-AAATAATGGCCTGAG-AG-AATTCGCGCTTCTCTG-AA-AATCTG---A--ACA-C--A--CT-----CT-----C-T--ATATTTCAGAAT-TAAT------------TGG---AAA-A-GGAGGAACATGGATA--C-CC-----------------GAAAC-C-CAGT-AATA-ATGATGTGT-CTCAC-C-ATC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    22490 152 -    145209 ATTCT-AAAGAATGACTTGAG-AG-ACTTTGTACTTCTCTG-AA-AACATA---A--GCA-T--G--AT-----CTC--T-C-A--ATATTTTAGAAT-TCAT------------AGG---GAA-A-GAAGAAACACGAATACAC-CTCCCTGAAACTCAGTAAAATAAT-T-CAGT-AATA-ATGGTCTAC-TTGAG-T-GTC
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                15885  68 -     19307 ---------------------------------------------------------------------------------------TCCTACAGAAT-TCAT------------A-----GAA-A-GGAGGAACACGGAGA--C-CT-----------------GAAAC-C-CAGT-AATA-ATGAT--GC-CTTAC-C-ATT
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 59 C 0
s Microtus_ochrogaster.CM001695.1                         11260626  76 -  27267610 TTTCC-AAACAGT-GCCCCAG-AG-AATCCATGCTGCCCTG-AG-AATCTG---A--G---C--A--GA-----AAC--A-A-A--GTGTTTCTGAAT-TAGC------------AAA--------------------------------------------------------------------------------------
i Microtus_ochrogaster.CM001695.1                        C 0 I 38
s Miniopterus_natalensis.LDJU01000034.1                    1850788  54 +   8254450 ACTCT-AAATAATGACCTGAG-AG-AACCCACGCTTCTCTG-AA-AATCTG---A--ACA-C--A--GT---------------------------------------------------------------------------------------------------------------------------------------
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 65
s Miniopterus_schreibersii.MinSch_scaffold_18080             34469  54 +     64694 ACTCT-AAATAATGACCTGAG-AG-AACCCACGCTTCTCTG-AA-AATCTG---A--ACA-C--A--GT---------------------------------------------------------------------------------------------------------------------------------------
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 65
s Miopithecus_ogouensis.k141_534055                           9375 133 -     28506 ATTGT-AAAGAATGACCTAAG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTGCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACTCGGATA--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-GTC
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6143  84 -      8324 ----------------------------------------------------------------A--GT-----CTC--T-C-T-AATATTTCAGGAT-TTAA------------AGG---GGA-A-GAAGGAACAGAGATA--C-CT-----------------GAAAC-C-CTGT-AATA-ATGATGTAT-CTTCCCC-CTC
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 49 C 0
s Mirza_zaza.k141_952172                                      9198 131 -     37649 ATTCT-AAATAATGGCCTGAG-AG-AATTCGCGCTTCTCTG-AA-AATCTG---A--ACA-C--A--CT-----CT-----C-T--ATATTTCAGAAT-TAAT------------TGG---AAA-A-GGAGGAACGTGGATA--C-CC-----------------GAAAC-C-CAGT-AATA-ATGATGTGT-CTCAC-C-ATC
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141860  72 -    366855 ---------------------------------------------------------------------------------------TACTTCAGAAT-TAAT------------AGG---GAA-A-GGATGAACACGGAGG--C-CT-----------------GAAAT-C-CAGT-AATA-ATAATGTGT-CTTAC-C-ATT
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 61 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35600 133 +     37127 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-TA-ATCCTG---A--ACA-G--A--GC-----CTC--T-C-T--AGATTTCAGAAT-TTAA------------AGG---CAA-A-GAAGGAACACAGATT--C-AT-----------------GAACC-C-CTGT-AATA-ATGATGTAT-CTTAC-C-ATC
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           6998 132 +     14753 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCTG---A--ACA-C--A--GC-----TGC--T-C-C--ATATGTCAGCAT-TAAT------------AGG---GAA-A-GGAGGAACATGGATA--C-CT------------------AAAC-C-CAGT-AATA-ACAATGTGC-CTCAC-C-ATC
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84361508 124 - 120012414 TTTCT-AAACAAAAGCCCAAG-AG-AATCCAAGCTACCCTG-AA-CATCTG---A--G---C--A--GA-----CCC--A-C-G--ATGTTTCAGAAT-TAGT------------AAG---GGA-A-G----GCCATGGATA--C-CT-----------------GAA-C-T-CTGT-CACA-ATGGTGTGT-C--AC-C-ATC
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87650506 125 - 129401213 TTTAT-AAACAAAAGCCCAAG-AG-AATCCAAGCTACCCTG-AA-AATCTG---A--A---C--A--GA-----CCC--A-C-G--ATGTTTCAGAAT-TAGT------------AAG---GGA-A-G----GCCATGGATA--C-CT-----------------GAAGC-T-TAGT-CACA-ATGGTGTGT-C--AC-C-ATC
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31355165 125 -  89631738 -TTCT-AAACAAAGGCCCCAA-AG-ATTCCAAGCTACCCTG-AAAAATCTG---A--A---C--A--AA-----CCC--A-C-A--TTGTTTCAGAAT-TAGT------------AAG---GGA-T-G----GCCATGGATA--C-CT-----------------GAAGC-T-CAGT-CACA-ATGGTGTGT-C--AC-C-ATC
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90752567 125 - 130317789 TTTAT-AAACAAAAGCCCAAG-AG-AATCCAAGCTACCCTG-AA-AATCTG---A--A---C--A--GA-----CCC--A-C-G--ATGTTTCAGAAT-TAGT------------AAG---GGA-A-G----GCCATGGATA--C-CT-----------------GAAGC-T-TAGT-CACA-ATAGTGTGT-C--AC-C-ATC
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              5153  80 +     14296 -------------------------------------------------------------CACA--GG-----C----T-C-C--ATATTTTAGA-T-TAAT------------GGG---GAA-A-GGAAGAATATGGATA--C-CT-----------------GAAAC-C-CAGG-ATTA-ATGAAGTGT-C--CC-C-ATC
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 47 I 4
s Mustela_putorius.JH418006.1                               301637 107 -  14710649 ATTCT-AAATAATGGTCTCAG-AG-AATTCATACTTCTCTG-CA-ATTCTG---A--ACA-C--A--GT-----CTC--T-C-T-AATATTTCAGGAT-TTTA------------AGG---GGA-A-GAAGGAACACTGATA--C-CT-----------------AAAAT----------------------------------
i Mustela_putorius.JH418006.1                            C 0 I 26
s Myocastor_coypus.MyoCoy_scaffold_10123                     71415 128 -     80779 ATTCT-AAATTATGATGGGAG-AG-AATTCATGCTTCTTTG-AAAAATCTA---A--G---C------A-----GT--GT-T-T-TATATTTCAGAAA-C-AA------------AGG---AAA-A-GGAAGAACATGGATA--C-CT-----------------GAATC-T-CAGT-AACA-ATGATATGT-C--GC-C-GCC
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                280641 133 -  10118263 ATTCT-AAATAATGGCCTGAG-AG-AATTCACGCTTCTCTG-AA-AATCTG---A--ACA-C--A--GC-----CGC--T-C-C--ATATGTCAGCAT-TAAT------------AGG---GAA-A-GGAGGAACATGGATA--C-CT-----------------GAAAC-C-CAGC-AATA-ACGATGTGT-CTCAC-C-ATC
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1587897 133 -   6019432 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCTG---A--ACA-C--A--GC-----CGC--T-C-C--ATATGTCAGCAT-TAAT------------AGG---GAA-A-GGAGAAACATGGATA--C-CT-----------------GAAAC-C-CAGT-AATA-ATGATGTGT-CTCAC-C-ATC
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3903995 133 -   4330536 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCTG---A--ACA-C--A--GC-----CGC--T-C-C--ATATGTCAGCAT-TAAT------------AGG---GAA-A-GGAGGAACATGGATA--C-CT-----------------GAAAC-C-CAGC-AATA-ACGATGTGT-CTCAC-C-ATC
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                         144 133 +      1835 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCGTCTCTG-AA-AATCTG---A--ACA-C--G--GC-----CAC--T-C-C--ATATGTCAGCAT-TAAT------------AGG---GAA-A-GGAGGAACATGGATA--C-CT-----------------GAAAC-C-CAGT-AATA-ACGATGTGT-CTCAC-C-GTC
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189481  72 +    196477 ---------------------------------------------------------------------------------------TATTTCGGAATCTAAC------------AGG---GTA-C-CAAGGAAGATGGATA--C-CT-----------------GATAC-C-CAGT-AAT--ATAATGTGT-TTTAC-C-CTC
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 57 C 0
s Nannospalax_galili.KL204047.1                            2034225 131 -   3037898 ATTCT-AAATAATGGCCCAAG-AG-AATTCATGCTTCCCTG-AA-AACCTG---A--A---CACA--GG-----CTCC---C-T--ATATTTCAGAAT-TAAC------------AAG---GAG-A-GGAAGGACAGGGATA--C-CT-----------------GAAAC-C-CAGT-CATA-ATGATGTGT-C--AC-C-ATC
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               15377 133 +     21681 ATTGT-ACAGAATGACCTGAG-AG-AATTAATGCTGCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----TG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACATGGATA--C-AT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-ATC
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20307729  84 +  31847680 ----------------------------------------------------------------A--GC-----CTC--T-C-T-AATATTTCAGGAT-TTaa------------agg---gga-a-gaaggaacagAGATA--C-CT-----------------GAAAC-C-CTGT-AATA-ATGATGTAT-CTTCCCC-TTC
i Neomonachus_schauinslandi.NINY01007730.1               I 49 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149571 133 -   9404916 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-ATTCTG---A--ACA-T--A--GC-----ATCC---C-T--ATATTTCaggat-ttaa------------agg---gaa-a-aaaggaacacagaga--C-CT-----------------GAAAC-C-CTAT-AATA-ATGATGTAT-CTTAG-C-ATT
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102586387 131 - 196305487 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCCTCTCTG-AA-AATCTG---A--ACA-T--G--CT-----CT-----C-C--ATATTTCATAAT-TAAT------------TGG---GAA-A-GGAGGAACATGGATA--C-CT-----------------GAAAC-C-CAGC-AATA-ATGATGTGT-CTCAC-C-ATC
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              311 131 +      2075 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCCTCTCTG-AA-AATCTG---A--ACA-T--G--CT-----CT-----C-C--ATATTTCATAAT-TAAT------------TGG---GAA-A-GGAGGAACATGGATA--C-CT-----------------GAAAC-C-CAGC-AATA-ATGATGTGT-CTCAC-C-ATC
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761741 132 + 199412804 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCCTCTCTGAAA-AATCTG---A--ACA-T--G--CT-----CT-----C-C--ATATTTCAGAAT-TAAT------------TGG---GAA-A-GGAGGAACATGGATA--C-CT-----------------GAAAC-C-CAGC-AATA-ATGTTGTGT-CTCAC-C-ATC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1363707 132 +   3988456 ATTCT-AAATAATGGCCTGAG-AG-CATTCAtgcttctctg-aa-aatctg---a--aga-C--A--GC-----TCC--T-A-T--ATATTTCAGAAT-TAAC------------AGG---GAA-A-GGAGGAATATGGATA--C-CT-----------------A-AAC-C-TTGT-AATA-ATGATGTGT-CTTAC-C-AGC
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  747021 130 +  11899542 ATTCT-AAATAAGGGTGGGAG-AG-AATTCATGCTTCTCTG-AAAAACCTA---A--A---C--A--ca-----at--gt-t-t-tatatttcagaag-t-aa------------agg---gaa-a-ggaagaacatGGGTA--C-TT-----------------GAATC-T-CAGT-AACA-ATGATGCAT-C--AC-C-ATC
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                              506874  84 -   2017862 ----------------------------------------------------------------A--GC-----CTC--T-C-T-AATATTTCAGGAT-TTaa------------agg---gga-a-gaaggaacagagatA--A-CT-----------------GAACC-C-CTGA-ATTAAATGATGTAT-CTTCC-C-CTc
i Odobenus_rosmarus.KB229312.1                           I 49 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   25294  76 +     28053 TTTCT-AAACAGT-GCCCCAG-AG-AATCCATGTTGCCCTG-AG-AATCTG---A--G---C--A--GA-----ACC--A-A-A--ATGTTTCCGAAT-TAAC------------AAG--------------------------------------------------------------------------------------
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 38
s Onychomys_torridus.OnyTor_scaffold_2986                    80293 124 +    102263 ACTCT-AAACAGT-GCCCAAG-AG-AATCCACACTGCCCTG-AA-AATCTG---A--A---C--A--GA-----CCC--A-C-G--ATGTTTCAGAAT-TAAC------------AAG---GGG-A-G----GGCAGGGACA--C-CT-----------------GAAAC-T-CAGT-CATA-ATGGTATGT-C--AC-C-ATC
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387              10011 133 -     18566 ATTCT-AAATAATAGCCTGAG-AG-AATTCATGCCTCTCTG-AA-AATTTG---A--GCA-A--A--GC-----CTC--T-C-T--ATATTTCAGAAT-TAAT------------AGG---GAA-A-TGAGGAACATGGATT--C-CT-----------------GTAAT-C-TAGT-AATA-ATGACCTAC-TTTAC-C-ATC
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 I 243
s Oryctolagus_cuniculus.CM000791.1                        67147508 133 + 174332312 ATTCT-AAGTAACAGCCTGAG-AG-AATCCACGCTTCTCTG-AA-AATCTG---A--ACA-C--A--GT-----CTC--T-C-T--ATATTTCATAAT-TAAT------------AGG---GAA-A-AGAGGAACATGGGTA--C-CT-----------------AAAAC-C-TAGT-AATA-ATGATGTGT-CTTAC-C-AGC
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462519 133 -    559221 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-ATTCTG---A--ACA-T--A--GC-----TTCC---C-T--ATATTTCaggat-ttaa------------agg---gaa-a-aaaggaacacAGCGA--A-CT-----------------GAAAC-C-CTAT-AATA-ATGATGTAT-CTTAG-C-ATT
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4294 131 +      8798 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCCTCTCTG-AA-AATCTG---A--ACA-C--A--CT-----CT-----C-C--ATATTTCAGAAT-TAAT------------TGG---GAA-A-GGAGGAACATAGATA--C-CT-----------------GAAAC-C-CAGC-AATA-ATGATGTGT-CTCAC-C-ATC
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696457 131 -   1103335 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCCTCTCTG-AA-AATCTG---A--ACA-C--A--CT-----CT-----C-C--ATATTTCAGAAT-TAAT------------TGG---GAA-A-GGAGGAACATAGATA--C-CT-----------------GAAAC-C-CAGC-AATA-ATGATGTGT-CTCAC-C-ATC
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    44334 132 +     80009 ATTGT-AAAGAATGACCTGAG-AG-AATTAGTGCTTCTTTG-AA-A-TCTG---A--ACA-C--AGCCT-----CA-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACAGATT--C-CT-----------------GAAAC-C-CCAT-AATA-ATTATGTGT-ATTAC-C-ATC
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189143236 132 + 189151597 ATTGT-AAAGAATGACCTGAG-AG-ATTTAGTGCTTCTTTG-AA-A-TCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GGA-A-AGAGAAACACAGATT--C-CT-----------------GAAAC-C-CCAT-AATA-ATTATGTGT-ATTAC-C-ATC
i Pan_troglodytes.CM009242.2                             C 0 I 31
s Panthera_onca.PanOnc_flattened_line_3271                  151331 133 +    230217 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-TA-ATTCTG---A--ACA-C--A--GC-----CTC--T-C-T--AGATTTCAGGAT-TTAA------------AGG---GAA-A-AAAGGAACACAGATA--C-CT-----------------GAAGC-C-CTGT-AATA-ATGATTTAT-CTTAC-C-ATC
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                264540 133 +  18783137 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-TA-ATTCTG---A--ACA-C--A--GC-----CTC--T-C-T--AGATTTCaggat-ttaa------------agg---gaa-a-aaaggaacacaGATA--C-CT-----------------GAAGC-C-CTGT-AATA-ATGATTTAT-CTTAC-C-ATC
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4721419 133 -   8748460 ATTCT-AAATAATGGCCTAAG-AG-AATTCATGCTTCTCTG-TA-ATTCTG---A--ACA-C--A--GC-----CTC--T-C-T--AGATTTCaggat-ttaa------------agg---gaa-a-aaaggaacacaGATA--C-CT-----------------GAAGC-C-CTGT-AATA-ATGATTTAT-CTTAC-C-ATC
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183443471 133 + 183742232 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATA--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-GTC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7117 133 +     20448 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATA--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-GTC
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20563929 133 +  20919399 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATA--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-GTC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   5861 133 +     41871 ATTGT-CAAGAATGACCTGAG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATA--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-GTC
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     9154 133 +     27711 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATA--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-GTC
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                   151 133 -     11374 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATA--C-AT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-GTC
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12830 133 -     78924 ATTCT-AAATAATGGCCTGGG-AG-AATTCATGCTTCTCCG-TA-ATTCTG---G--ACA-T--A--GC-----CTC--T-C-T--AGATTTCAGGAC-ATAA------------AGG---GAA-A-GAAGAAACACAGATA--C-CT-----------------GAAAC-C-CTGT-AATA-GTGATGTCT-CTTAC-C-ATC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10270 131 +     13100 ATTCT-AAATAATGGCCTGAG-AG-AATTCGTGCCTCTCTG-AA-AATTTG---A--ACC-T--A--CT-----CT-----C-C--ATATTTCAGAAT-TAAT------------TGG---GAA-A-GGAGGAACATGGATA--C-CT-----------------GAAAC-C-CAGC-AATA-ACGATGTTT-CTCAC-C-ATC
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8676 131 +     25941 ATTCT-AAATAATGGCCTGAG-AG-AATTCGTGCCTCTCTG-AA-AATTTG---A--ACC-T--A--CT-----CT-----C-C--ATATTTCAGAAT-TAAT------------TGG---GAA-A-GGAGGAACATGGATA--C-CT-----------------GAAAC-C-CAGC-AATA-ACGATGTTT-CTCAC-C-ATC
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18194920 124 -  18517816 ACTCT-AAACAGT-GCCCAAG-AG-AATCCACGCTGCCCTG-AA-AATCTG---A--A---C--A--GA-----CCC--A-C-G--ATGTTTCAGAAT-TAAC------------AAG---GGA-A-G----GGCAGGGACA--C-CT-----------------GAAAC-T-CAGT-CAGG-ATGGTATGT-C--AC-C-ATC
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28334  79 -     29689 -------------------------------------------------------------------CA-----GTC--T-C-TCTTTATTTCCGAAT-T-GA------------AGG---AAA-A-GGAAGAACATAGGTA--C-CT-----------------GAATC-C-CAGC--ATA-ACGATGTGT-C--AC-C-ATC
i Petromus_typicus.PetTyp_scaffold_42190                 I 42 C 0
s Piliocolobus_badius.k141_1234363                           43868 133 +     62158 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTGCTTTG-AA-AACCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATA--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-GTC
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        38615 133 +     89929 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTGCTTTG-AA-AACCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACATGGATA--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-G-GTC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40031 133 +     51399 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTGCTTTG-AA-AACCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACATGGATA--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-G-GTC
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296269 133 -  14605196 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTGCTTTG-AA-AACCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACATGGATA--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-G-GTC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             1936 133 +     22620 ATTCT-AAATAATGGCCTGAG-AA-AATTCATGCTTCTCTG-AA-AACCTG---A--ACA-C--A--GC-----CGC--T-C-C--ATATGTCAGCAT-TAAT------------AGG---GAA-A-GGAGGAACATGGATA--C-CT-----------------GAAAC-C-CAGT-AATA-ACGATGTGT-CTCAC-C-ATC
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189131372 133 + 189387572 ATTGT-AAAGAATGACCCGAG-AG-AATTAGTGCTTCTTTGAAA-A-TCTG---A--ACA-C--AGCCT-----CC-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACAGATA--C-CT-----------------GAAAC-C-CCAT-AATA-ATTACATGT-ATGAC-C-ATC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9570979 133 +   9816681 ATTGT-AAAGAATGACCCGAG-AG-AATTAGTGCTTCTTTGAAA-A-TCTG---A--ACA-C--AGCCT-----CC-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACAGATA--C-CT-----------------GAAAC-C-CCAT-AATA-ATTACATGT-ATGAC-C-ATC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               73553 133 -     81375 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTGCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----TG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACATGGATA--C-AC-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-ATC
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              5373 133 +     19060 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTGCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----TG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACATGGATA--C-AC-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-ATC
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 13512 133 -     22811 GTTCT-AAATAATGACCTGAG-AG-AATTCACGCTTCCCTG-GA-AATTTG---A--GCA-C--T--GC-----CTC--G-C-T--ATAATTCAGAAT-TAAT------------AGG---GAA-A-GGAGAAGCATGAATA--C-TC-----------------AAAAT-G-CAGT-AATA-ACCACCTAC-TTTAC-C-AAC
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2596908 131 -   4620579 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCTG---A--ACA-C--A--CT-----CT-----C-T--ATATTTCAGAAT-TAAT------------TGG---AAA-A-GGAGGAACGTGGATA--C-CT-----------------GAAAC-C-CAGT-AATA-ATGATGTGT-CTCAC-C-ATC
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     990894 131 +   2598838 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCGG---A--ACA-C--A--CT-----CT-----C-T--ATATTTCAGAAT-TAAT------------TGG---AAA-A-GGAGGAACATGGATA--C-CT-----------------GAAAC-C-CAGT-AATA-ATGATGTGT-CTTAC-C-ATC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29206 131 +     38485 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCGG---A--ACA-C--A--CT-----CT-----C-T--ATATTTCAGAAT-TAAT------------TGG---AAA-A-GGAGGAACATGGATA--C-CT-----------------GAAAC-C-CAGT-AATG-ATGATGTGT-CTTAC-C-ATC
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1249 131 -     13098 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCGG---A--ACA-C--A--CT-----CT-----C-T--ATATTTCAAAAT-TAAT------------TGG---AAA-A-GGAGGAACATGGATA--C-CT-----------------GAAAC-C-CAGT-AATG-ATGATGTGT-CTTAC-C-ATC
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26727 131 +     35766 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCGG---A--ACA-C--A--CT-----CT-----C-T--ATATTTCAGAAT-TAAT------------TGG---AAA-A-GGAGGAACATGGATA--C-CT-----------------GAAAC-C-CAGT-AATA-ATGATGTGT-CTTAC-C-ATC
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           4914 131 -     24134 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCGG---A--ACA-C--A--CT-----CT-----C-T--ATATTTCAGAAT-TAAT------------TGG---AAA-A-GGAGGAACATGGATA--C-CT-----------------GAAAC-C-CAGT-AATA-ATGATGTGT-CTTAC-C-ATC
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28739 131 -     67325 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCGG---A--ACA-C--A--CT-----CT-----C-T--ATATTTCAGAAT-TAAT------------TGG---AAA-A-GGAGGAACATGGATA--C-CT-----------------GAAAC-C-CAGT-AATA-ATGATGTGT-CTTAC-C-ATC
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           4962 131 -      6182 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCGG---A--ACA-C--A--CT-----CT-----C-T--ATATTTCAGAAT-TAAT------------TGG---AAA-A-GGAGGAACATGGATA--C-CT-----------------GAAAC-C-CAGT-AATA-ATGATGTGT-CTTAC-C-ATC
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            10543 127 -     21651 ATTCT-AAAAACTGGCTCAAG-AG-GATCCATGCTGCCCTA-AA-AATTTG---G--A---C--A--GA-----TCC--A-T-G--ATGTTTCAGATT-TCAC------------AAG---GGA-TTA----AACATGGAAA--CTCA-----------------GAAAT-T-CAGT-CATA-ACATTGTGT-C--AC-C-ATC
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            15311  72 -     21811 ---------------------------------------------------------------------------------------TATTTCAGGAT-TAAT------------AGG---GAA-A-GGAGGAACACGGAGA--C-CT-----------------GAAAT-C-CAGT-AATA-ACAATGTGT-CTTAC-C-ATC
i Pteronotus_parnellii.KE909381.1                        I 57 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40414 107 +     42204 ATTCT-AAATAATGGCCTGAG-AG-AATTCATACTTCTCTG-CA-ATTCTG---A--ACA-C--A--GT-----CTC--T-C-T-AATATTTCAGGAT-TTTA------------AGG---GGA-A-GAAGGAACACTGATA--C-CT-----------------AAAAC----------------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 35
s Pteropus_alecto.KB030862.1                              22976959 133 +  28871421 ATTCT-AAATAACAGCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCTG---A--ACA-C--A--GC-----CTC-tc-t-t---tatttcagaat-taat------------aGG---GAA-A-GGAGGAACATAGATA--C-CT-----------------AAAAC-A-CAAT-AGTA-ATGATGTAT-CTTGC-C-ATC
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                7012 133 -      8028 ATTCT-AAATAACGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCTG---A--ACA-T--A--GC-----CTC-tc-t-t---tatttcagaat-taat------------AGG---GAA-A-GGAGGAACATAGATA--C-CT-----------------AAAAC-A-CAAT-AGTA-ATGATGTAT-CTTGC-C-ATC
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20274487 133 -  38429054 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-TA-ATTCTG---A--ACA-C--A--GC-----CTC--T-C-T--AGATTTCaggat-ttaa------------agg---gaa-a-aaaggaacacaGATA--C-CT-----------------GAAGC-C-CTGT-AATA-ATGATTTAT-CTTAC-C-ATC
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15415  77 -     91421 --------------------------------------------------------------------------TG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATA--C-AT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-ATC
i Pygathrix_cinerea.k141_1153803                         I 29 C 0
s Pygathrix_nigripes_b.ctg100                                 7609534  78 +   7812017 --------------------------------------------------------------------T-----TG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATA--C-AT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-ATC
i Pygathrix_nigripes_b.ctg100                               I 28 C 0
s Pygathrix_nigripes_a.k141_215492                             15358 133 -     72585 ATTGT-AGAGAATGACCTGAG-AG-AATTAATGCTGCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----TG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATA--C-AT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-C-ATC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53570768 119 +  90668790 ATTCT-AAACAATAGCCCAAG-AG-AATCCAGGCTGCCCTG-AA-AATCTG---A--A---C--A--GA-----CC--AA-C-C--AAGT-TCAGAAT-TAAC------------AAG---GGA-A-G----GCCATGGACA--C-TT-----------------GAA-T-T-CAGT-CATA-ATGGTGTGC-C--AT------
i Rattus_norvegicus.chr16                                C 0 I 3
s Rhinopithecus_bieti.k119_217274                             7069 133 -     11128 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTGCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----TG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATA--C-AC-----------------GAAAC-C-CTAT-AATA-ATTGTGTGT-CTTAC-C-ATC
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236418 133 - 195417433 ATTGT-AAAGAATGACCTGAG-AG-AATTCATGCTGCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----TG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATA--C-AT-----------------GAAAC-C-CTGT-AATA-ATTGTGTGT-CTTGC-C-ATC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672074 133 +   7961872 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTGCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----TG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATA--C-AC-----------------GAAAC-C-CTAT-AATA-ATTGTGTGT-CTTAC-C-ATC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88030  82 -     96226 ----------------------------------------------------------------A--GG-----CTCTC--T-T---TATTTCAGAAT-TAAT------------AGG---GAA-A-GGAGGAACATAGATA--C-CT-----------------GAAAC-A-CAAT-AGTA-ATGATGTGT-CTTGC-C-ATC
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 49 C 0
s Saguinus_bicolor.k141_8081                                   519 134 +     42994 ATTAT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTG-AG-AATCTG---A--ACA-C--AGCCT-----CT-----C-T--ATATTTCAGAAG-TATT------------AGG---GAA-A-AGAGAAACACAGATA--C-CA-----------------GAAAC-C-CCAT-AATA-ACTGTGTGT-CTTCC-TCATC
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_57697                                304 134 +      1030 ATTAT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTG-AG-AATCTG---A--ACA-C--AGCCT-----CT-----C-T--ATATTTCAGAAG-TATT------------AGG---GAA-A-AGAGAAACACAGATA--C-CA-----------------GAAAC-C-CCAT-AATA-ACTGTGTGT-CTTAC-TCATC
i Saguinus_imperator.k141_57697                          C 0 C 0
s Saguinus_inustus.k141_3945547                                383 134 -      8737 ATTAT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTG-AG-AATCTG---A--ACA-C--AGCCT-----CT-----C-T--ATATTTCAGAAG-TATT------------AGG---GAA-A-AGAGAAACACAGATA--C-CA-----------------GAAAC-C-CCAT-AATA-ACTGTGTGT-CTTAC-TCATC
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_midas.LG03                                    209469870 134 + 209938924 ATTAT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTG-AG-AATCTG---A--ACA-C--AGCCT-----CT-----C-T--ATATTTCAGAAG-TATT------------AGG---GAA-A-AGAGAAACACAGATA--C-CA-----------------GAAAC-C-CCAT-AATA-ACTGTGTGT-CTTCC-TCATC
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 8505 134 -      9399 ATTAT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTG-AG-AATCTG---A--ACA-C--AGCCT-----CT-----C-T--ATATTTCAGAAG-TATT------------AGG---GAA-A-AGAGAAACACAGATA--C-CA-----------------GAAAC-C-CCAT-AATA-ACTGTGTGT-CTTAC-TCATC
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951243 133 - 121099817 ATTGT-AAAGAATGACCTGAG-AG-AATGAATGCTTCTTTG-AA-AATCTG---A---CA-C--AGCCT-----CT-----C-T--ATATTTCAGAAT-TATT------------Agg---gaa-a-agagaaacacagaTA--C-CA-----------------GAGAC-C-TCGT-AATA-ACTGTGTGT-CTTAC-CCATC
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23585 133 +     46362 ATTGT-AAAGAATGACCTGAG-AG-AATGAATGCTTCTTTG-AA-AATCTG---A---CA-C--AGCCT-----CT-----C-T--ATATTTCAGAAT-TATT------------AGG---GAA-A-AGAGAAACACAGATA--C-CA-----------------GAGAC-C-TCGT-AATA-ACTGTGTGT-CTTAC-CCATC
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               23680 133 +     45824 ATTGT-AAAGAATGACCTGAG-AG-AATGAATGCTTCTTTG-AA-AATCTG---A---CA-C--AGCCT-----CT-----C-T--ATATTTCAGAAT-TATT------------AGG---GAA-A-AGAGAAACACAGATA--C-CA-----------------GAGAC-C-TCGT-AATA-ACTGTGTGT-CTTAC-CCATC
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             40359 133 -     64574 ATTGT-AAAGAATGACCTGAG-AG-AATGAATGCTTCTTTG-AA-AATCTG---A---CA-C--AGCCT-----CT-----C-T--ATATTTCAGAAT-TATT------------AGG---GAA-A-AGAGAAACACAGATA--C-CA-----------------GAGAC-C-TCGT-AATA-ACTGTGTGT-CTTAC-CCATC
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               3432 133 -     23631 ATTGT-AAAGAATGACCTGAG-AG-AATGAATGCTTCTTTG-AA-AATCTG---A---CA-C--AGCCT-----CT-----C-T--ATATTTCAGAAT-TATT------------AGG---GAA-A-AGAGAAACACAGATA--C-CA-----------------GAGAC-C-TCGT-AATA-ACTGTGTGT-CTTAC-CCATC
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 23576 133 -     61129 ATTGT-AAAGAATGACCTGAG-AG-AATGAATGCTTCTTTG-AA-AATCTG---A---CA-C--AGCCT-----CT-----C-T--ATATTTCAGAAT-TATT------------AGG---GAA-A-AGAGAAACACAGATA--C-CA-----------------GAGAC-C-TCGT-AATA-ACTGTGTGT-CTTAC-CCATC
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5421008  73 -   5703754 --------------------------------------------------------------------------------------ATATTTCAGAAT-TATT------------AGG---GAA-A-AGAGAAACACAGACA--C-CA-----------------GGAAC-C-CCAT--ATA-ACTATGTGT-CTTCC-CCATC
i Sapajus_apella.ctg103                                  I 58 C 0
s Sapajus_macrocephalus.k141_351809                          56249  73 -     80660 --------------------------------------------------------------------------------------ATATTTCAGAAT-TATT------------AGG---GAA-A-AGAGAAACACAGACA--C-CA-----------------GGAAC-C-CCAT--ATA-ACTATGTGT-CTTCC-CCATC
i Sapajus_macrocephalus.k141_351809                      I 58 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153381 110 -    313613 ATTCT-AAATAATGGCCTGCG-AG-AATTCGTGATTTTCTA-AA-AATCGG---A--A---C--A--GT-----CTC--G-C-T--ACACGTTAGAAT-TAAT------------AGG---GCA-A-G------CATGG-TA--C-A------------------GCAA--C-CAGT-AACA-ATGACA---------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 3
s Semnopithecus_entellus.k141_1672505                          250 133 -     12572 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTGCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----TG-----C-C--ATATCTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACATGGATA--C-AT-----------------GAAAT-C-CTAT-AATA-ATTATGTGT-CTTAC-C-ATC
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27100 133 +     39453 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTGCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----TG-----C-C--ATATCTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACATGGATA--C-AT-----------------GAAAT-C-CTAT-AATA-ATTATGTGT-CTTAC-C-ATC
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            7618 133 +     27826 ATTGT-AAAGAATAACCTGAG-AG-AATTAATGCTGCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----TG-----C-C--ATATCTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACATGGATA--C-AT-----------------GAAAT-C-CTAT-AATA-ATTATGTGT-CTTAC-C-ATC
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             7140 133 -     19483 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTGCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----TG-----C-C--ATATCTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACATGGATA--C-AT-----------------GAAAT-C-CTAT-AATA-ATTATGTGT-CTTAC-C-ATC
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                       441 133 -     12762 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTGCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----TG-----C-C--ATATCTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACATGGATA--C-AT-----------------GAAAT-C-CTAT-AATA-ATTATGTGT-CTTAC-C-ATC
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                            302 133 +     13763 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTGCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----TG-----C-C--ATATCTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACATGGATA--C-AT-----------------GAAAT-C-CTAT-AATA-ATTATGTGT-CTTAC-C-ATC
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                      466 124 -     30804 ATTCT-AAACAGT-GCCCAAG-AG-AATCCATGCTGCCCTA-AA-AATCTG---A--G---C--A--GG-----TCC--A-T-G--ATATTTCAGAAT-TAAT------------AAG---GGA-A-G----GGCAGGGATA--C-CT-----------------GAAAC-T-CAGT-CATA-ACAGCATGT-C--AT-C-ATC
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               3948 133 +   1910179 ATTCT-AAATAATGACCTGAC-AG-AATTCACGCTTCTCTG-AC-AACCTG---A--ACA-T--A--GC-----CT---TAC-A--ATAATTTAGAAT-GAAT------------AGG---GAA-A-GGAGGAACACAGATA--C-CT-----------------GAAAC-G-CAGT-AGTA-ATGATGTGT-GTTAC-C-ATC
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13651239  75 -  18376816 ----------------------------------------------------------CA-C--A--GT-----ATC--A-C-T--ATATTTCCAA-----At------------agg---gaa-a-ggaggaaaatgagta--a-ct-----------------aaaaa-t-caga-aataaat---atgC-CTTAC------
i Sorex_araneus.JH798187.1                               I 42 I 3
s Spermophilus_dauricus.KZ294078.1                         1954105 131 -   3870691 AGTCT-AAATAATTACCCAAG-AG-AATTCATGCTTCTCTG-AA-ATTCTG---A--A---CATG--GT-----CTC--T-C-T--ATATTTCAGAAT-TAAT------------AGG---GAA-A-GGAAAAACATGGATA--C-CT-----------------AAAAC-C-CAGT-AATA-ATGATGTGC-C--AC-C-ATT
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             30912 107 +     97271 ATTCT-AAACAATGGCCTGAG-AG-AATTCATAGTTCTCTG-AA-ATTCTG---A--ACA-C--A--GT-----CTC--T-C-T-GATATTTCAGGAT-CTAG------------AGG---GGA-A-GAAGGAACACAGATA--C-CT-----------------GAAAC----------------------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 26
s Suricata_suricatta.SurSur_flattened_line_6629              18503 133 -    196729 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-TA-ATCCTG---A--ACA-G--T--AC-----CTC--T-C-T--AGATTTCAGAAT-TTAA------------AGG---CAA-A-GAAGGAACACAGATT--C-AT-----------------GAACC-C-CTGT-AATA-ATGATGTAT-CTTAC-C-ATC
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6810984 133 +  69701581 ATTGT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATTTG---A--ACA-C--G--GC-----CT--TT-C-T--GTGTTTCAGAAT-TAGT------------AGG---GAA-A-GGAGGAACATGGATA--T-TT-----------------Gaaat-a-cagt-aata-ataatgtGT-CTTAC-C-ATC
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                10988 133 +     41958 ATTCT-AAGTGATGACCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCTG---A--GCA-C--A--GC-----CTC--T-C-T--GTATTTCAGAAT-TAAT------------AGG---GAA-A-GGAGGAACATGGATT--C-CT-----------------GAAAC-C-CAGT-AATA-ATGATGTGT-CTTAC-C-ATC
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72842  70 +    116680 ---------------------------------------------------------------------------------------TACTTCGGAATCTAAC------------AGG---CTA-C-CAAGGAAGATGGATA--C-CT-----------------GACAC-C-CAGT-AAC--ATAATG--T-TTTAC-C-CTC
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 57 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      118942 104 -    156842 ATTAT-ACATAATTGCCTGAG-AG-GATGCATGCTTCTCTG-AA-AATCTG---G--ACA-C--A--GC-----CTC--T-C-C--ATATTTCAGAAT-TAAT------------AGG---G-A-A-GGAGGAACATGGAAA--C-CT-----------------GA-AC----------------------------------
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 26
s Tapirus_terrestris.TapTer_scaffold_755                    387413  78 +    539355 -----------------------------CATGCTTCTCTG-AA-AATCTG---G--ACA-C--A--GC-----CTC--T-C-T--ATATTTCAGAAT-TAAT------------AGG---G-A-A-GGAGGAACATGGAAA--C-CT-----------------GA-AC----------------------------------
i Tapirus_terrestris.TapTer_scaffold_755                 I 14 I 26
s Tarsius_lariang.k141_2201908                               26648 133 +     70052 AGTCT-AATGAATAACTGGAG-AT-AATGCATGCTTCTCTG-GA-AACTGG---A--ACA-T--AGCCC-----CT-----C-C--ATATTTCAGAAT-TATT------------AAG---GAA-A-GATGGAACGTGGAAA--C-CT-----------------GAAAC-C-CAGT-GATA-ATGATGAGT-TTGAC-A-ATC
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1445 133 -     16117 AGTCT-AATGAATAACTGGAG-AT-AATGCATGCTTCTCTG-GA-AACTGG---A--ACA-T--AGCCC-----CT-----C-C--ATATTTCAGAAT-TATT------------AAG---GAA-A-GATGGAACGTGGAAA--C-CT-----------------GAAAC-C-TAGT-GATA-ATGATGAGT-TTGAC-A-ATC
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428789 133 + 186847797 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTTCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----CG-----C-C--ATATTTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACACGGATA--C-CT-----------------GAAAC-C-CTAT-AATA-ATTATGTGT-CTTAC-T-GTC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105653  80 +    114563 -------------------------------------------------------------------TA-----GTC--T-C-TGTATATTTCAGAAT-T-AA------------AGG---AAA-A-GGAAGACCATAGGTA--C-CT-----------------GAATC-C-CAGT-GGTA-ACCATGTGT-C--AC-C-ATC
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 41 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   6581 133 +      8208 ATTCT-AAATAGTGGCCTGAT-AG-AATCCATGCTTCTCTG-AA-AATCTG---A--CCA-C--A--CC-----CTC--T-C-T--GTATGTCAAAAT-TAAT------------AGG---GTA-C-AGAGGATCATGGGTA--C-CT-----------------GAAAC-CCCATA-ACC--ATATCATGT-TTTAC-C-AAC
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81372 130 +    610378 ATTCT-ACATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-GA-AATCTG---A--ACA-C--A--GA-----CT--TT-C-T--CTGTTTCAGAAT-TCAT------------AAG---GAA-A-GGAGGAACACAGAGA--C-CT-----------------GAA-T-C-CAGG-AATA-ATGAT--GC-CTTAC-C-ATT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         11191 133 -     20410 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTGCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----TG-----C-C--ATATCTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACATGGATA--C-AT-----------------GAAAT-C-CTAT-AATA-ATTATGTGT-CTTAC-C-ATC
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                       305 133 -     12674 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTGCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----TG-----C-C--ATATCTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACATGGATA--C-AT-----------------GAAAT-C-CTAT-AATA-ATTATGTGT-CTTAC-C-ATC
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       11292 133 +     19930 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTGCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----TG-----C-C--ATATCTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACATGGATA--C-AT-----------------GAAAT-C-CTAT-AATA-ATTATGTGT-CTTAC-C-ATC
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       7703 133 -     19997 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTGCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----TG-----C-C--ATATCTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACATGGATA--C-AT-----------------GAAAT-C-CTAT-AATA-ATTATGTGT-CTTAC-C-ATC
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            47842 133 -     60166 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTGCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----TG-----C-C--ATATCTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACATGGATA--C-AT-----------------GAAAT-C-CTAT-AATA-ATTATGTGT-CTTAC-C-ATC
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        15314 133 -     27529 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTGCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----TG-----C-C--ATATCTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACATGGATA--C-AT-----------------GAAAT-C-CTAT-AATA-ATTATGTGT-CTTAC-C-ATC
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     15258 133 -     18194 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTGCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----TG-----C-C--ATATCTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACATGGATA--C-AT-----------------GAAAT-C-CTAT-AATA-ATTATGTGT-CTTAC-C-ATC
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           8970 133 -     21137 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTGCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----TG-----C-C--ATATCTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACATGGATA--C-AT-----------------GAAAT-C-CTAT-AATA-ATTATGTGT-CTTAC-C-ATC
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    7673 133 -     10723 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTGCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----TG-----C-C--ATATCTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACATGGATA--C-AT-----------------GAAAT-C-CTAT-AATA-ATTATGTGT-CTTAC-C-ATC
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         6845 133 +      9834 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTGCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----TG-----C-C--ATATCTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACATGGATA--C-AT-----------------GAAAT-C-CTAT-AATA-ATTATGTGT-CTTAC-C-ATC
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        25158 133 +     32220 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTGCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----TG-----C-C--ATATCTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACATGGATA--C-AT-----------------GAAAT-C-CTAT-AATA-ATTATGTGT-CTTAC-C-ATC
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5939260 133 +   6242583 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTGCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----TG-----C-C--ATATCTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACATGGATA--C-AT-----------------GAAAT-C-CTAT-AATA-ATTATGTGT-CTTAC-C-ATC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        8511 133 +     20839 ATTGT-AAAGAATGACCTGAG-AG-AATTAATGCTGCTTTG-AA-AATCTG---A--ACA-C--AGCCT-----TG-----C-C--ATATCTCAGAAT-TAAT------------AGG---GAA-A-AGAGAAACATGGATA--C-AT-----------------GAAAT-C-CTAT-AATA-ATTATGTGT-CTTAC-C-ATC
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4293412 133 +  10818551 ATTCT-AACTAATGGCCTGAG-AG-ATTTCATGCTTCCCAG-GA-AATCTG---A--GCA-T--A--GC-----CTC--T-C-T--ATATATCAGAAT-TAAT------------AGG---GAA-A-GGAGGAACATGGGTA--C-CT-----------------GAAAC-G-TGGT-AATA-ATGACCTAC-TTTAC-C-ATC
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2156028  82 +   4065304 ----------------------------------------------------------------A--GT-----CTC--T-C-T--ATATTTCAGAAT-TAAT------------AGG---GAA-A-GGAGGAACATGAATA--C-CT-----------------GAAAT-C-CAGT-AATA-ATGAGGCAT-TTTGT-C-GGT
i Tupaia_chinensis.KB320699.1                            I 49 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9470  83 -     10553 ----------------------------------------------------------------A--GT-----CTC--T-C-T--ATATTTCTGAAT-TAAT------------AGG---GAAAA-GGAGGAACATGAATA--C-CT-----------------GAAAT-C-CAGT-AATA-ATGAGGCAT-TTTGT-C-GTT
i Tupaia_tana.TupTan_flattened_line_97126                I 49 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   53472 126 -     77625 ATTCT-AAATAATGACCTGAG-AG-AATTCATGATACTCTG-AA-AATCTG---A--ACA-C--A--GC-----CTC--A-C-T--GCCTATCAAAAT-TAAT------------AGG---GAA-A-G------CATGGGTA--C-C------------------ACAAC-T-CAGT-AATG-ATGACACCC-CTTTC-C-ATC
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4850614 135 -   5085361 ACTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-ATTCTG---A--ACA-C--A--GC-----CTC--T-C-T-AATATTTCAGGAT-TTAA------------AGA---CGG-A-GAAGGAACACAGATA--C-CT-----------------GAAACCC-CTGT-AATA-ATGATGTAT-CTTCC-C-ATC
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  11573 131 +     50397 ATTTT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCTG---A--ACA-C--A--CT-----CT-----C-T--ATATTTCAGAAT-TAAT------------TGG---AAA-A-GGAGGAACGTGGATA--C-CC-----------------GAAAC-C-CAGT-AATA-ATGATGTGT-CTCAC-C-ATC
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11632 131 +     24756 ATTTT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCTG---A--ACA-C--A--CT-----CT-----C-T--ATATTTCAGAAT-TAAT------------TGG---AAA-A-GGAGGAACGTGGATA--C-CC-----------------GAAAC-C-CAGT-AATA-ATGATGTGT-CTCAC-C-ATC
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5372066 127 -   5488506 ATTGT-AAATAATAGCCTGAG-AG-AATTCATGCTTCTCTG-AA-AATCTG---A--ACA-C--A--GC-----CTC--T-C-T--ATATTTCAGAAT-TAGT------------AGA---GAA-A-GGAGGAACAT-TATA--C-CT-----------------GAAAC-A-CAGT-AATA-ATG-----C-CTTAC-C-ATC
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 10967 133 -     43706 ATTCT-AAATAATGGCCTGAG-AG-AATTCATGCTTCTCTG-AA-ATTCTG---A--ACA-T--A--GC-----TTCC---C-T--ATATTTCAGGAT-TTAA------------AGG---GAA-A-AAAGGAACACAGAGA--C-CT-----------------GAAAC-C-CTAT-AATA-ATGATGTAT-CTTAG-C-ATT
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          1232 131 +    224448 GTTCT-AAATAATGGCCCAAG-AA-AATTCATGCTTCTCTG-AA-GTTCTG---A--A---CATG--GT-----CTC--T-C-C--ATATTTCAGAAT-TAAT------------AGG---GTA-A-GAGAAAACATGGATA--C-CT-----------------AAAAC-C-CAGT-AATA-ATGATGTGC-C--AC-C-ATT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732          5592  83 +     86975 ----------------------------------------------------------------A--GC-----CTC--T-C-T-AATATTTCAGGAT-TTAA------------AGG---GGA-A-GAAGGAACAGAGATA--C-CT-----------------GAAAC-C-CTGA-AATA-ATGATGTAT-CTTCC-C-CTC
i Zalophus_californianus.ZalCal_flattened_line_17732     I 49 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      15055 106 +     63895 ATTTT-AAATAGCGGCCCAAG-AG-AATTCATGCTTCTCTG-AA-AAGCTG---A--A---CACA--GT-----CTC--A-C-T--GTATTTCACAAT-TAAT------------AGG---CAA-A-GAAAGACCAGGGACA--C-CT-----------------GAAAC----------------------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 24
e Saguinus_labiatus.k141_285685                               8505   5 +      8564 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276   0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584   0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641   0 -      1748 C
e Symphalangus_syndactylus.tarseq_199                      1093192   0 -   1523678 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660   0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968   0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090   0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384   0 +     63832 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690  60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385   0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468   0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491   0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345   0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229   0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831   4 +    630418 I
e Noctilio_leporinus.NocLep_scaffold_251                    758183   0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422   0 +   7148211 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379  13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466   0 -    437263 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961   0 +     10310 C
e Lipotes_vexillifer.KE559953.1                             268344   0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650   0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293   0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052   0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157   0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374   0 +     14092 C
e Hylobates_agilis.k141_232023                                2330   0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604   0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173   0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577   3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516   0 +     36099 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312   0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689   0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752   0 +    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347   0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076   0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030   0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310   0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682   0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014   0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932   0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376   0 +  48749331 C
e Bison_bison.KN261452.1                                    200171   0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115   0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905   0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440   0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675   0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192   0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       7123 32 +     62944 ATT-TA---TGTCC-------CTG-------------TCCCT----GG----CAGATT-T--TA--T----AA
s Acinonyx_jubatus.LLWD01001279.1                           827613 25 -   1699592 --T-TA---CATCC-------TTG-------------TCCCT----GA----CAGATT-T-------------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 2
s Acomys_cahirinus.AcoCah_scaffold_12655                     71069 34 +     87051 ACA-CAATGTGTCC-------CTG-------------TCCCA----GA----CACACT-G--TA--T----A-
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 1
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510888 25 -  29979442 --T-TA---CATCC-------CTG-------------TCTCT----GA----TAGATT-C-------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 2
s Ailurus_fulgens.LNAC01001112.1                             79660 25 -    347723 --T-TG---TATCC-------CTG-------------TCTCT----GA----CAGATT-T-------------
i Ailurus_fulgens.LNAC01001112.1                         I 26 I 2
s Allactaga_bullata.AllBul_scaffold_9566                     74787 32 -     89534 ATT-TA---TGCCC-------CCA-------------TGCCT----GA----CAGATT-A--TA--T----AA
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 2
s Allenopithecus_nigroviridis.k141_3361533                   15051 32 -     52922 ATT-TA---TGTCT-------CAG-------------ACCCT----GG----CAGATT-T--TG--T----AA
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         14967 32 -     28001 ATT-TA---TGTCT-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          5465 32 -     18505 ATT-TA---TGTCT-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           6317 32 -     12518 ATT-TA---TGTCT-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              7911 30 +     51355 ATT-TA---TGTCC-------CTG-------------TCATG----GG----CAGATT-T--TA--T------
i Alouatta_belzebul.k141_3560514                         C 0 I 2
s Alouatta_caraya.k141_1701091                                1020 30 -     36483 ATT-TA---TGTTC-------CTG-------------TCATG----GG----CAGATT-T--TA--T------
i Alouatta_caraya.k141_1701091                           C 0 I 2
s Alouatta_discolor.k141_566626                              11469 30 +     28687 ATT-TA---TGTCC-------CTG-------------TCATG----GG----CAGATT-T--TA--T------
i Alouatta_discolor.k141_566626                          C 0 I 2
s Alouatta_juara.k141_1302312                                    0 15 +     27940 ---------------------------------------ATG----GG----CAGATT-T--TA--T------
i Alouatta_juara.k141_1302312                            N 0 I 2
s Alouatta_macconnelli.k141_918386                            1017 43 -      9457 ATT-TA---TGAGT-------AAGATTTTATAAGAGTTTATG----GG----CAGATT-T--TA--T------
i Alouatta_macconnelli.k141_918386                       C 0 I 2
s Alouatta_nigerrima.k141_1929159                                0 15 +     30492 ---------------------------------------ATG----GG----CAGATT-T--TA--T------
i Alouatta_nigerrima.k141_1929159                        N 0 I 2
s Alouatta_palliata.k141_2135620                              3987 30 +     47717 ATT-TA---TGTCC-------CTG-------------TCATG----GG----CAGATT-T--TA--T------
i Alouatta_palliata.k141_2135620                         C 0 I 2
s Alouatta_puruensis.k141_362188                               699 43 +      5663 ATT-TA---TGAGT-------AAGATTTTATAAGAGTTTATG----GG----CAGATT-T--TA--T------
i Alouatta_puruensis.k141_362188                         C 0 I 2
s Alouatta_seniculus.k141_117119                             15151 43 +     50774 ATT-TA---TGAGT-------AAGATTTTATAAGAGTTTATG----GG----CAGATT-T--TA--T------
i Alouatta_seniculus.k141_117119                         C 0 I 2
s Anoura_caudifer.AnoCau_scaffold_1412                      185656 30 +    412891 --T-TA---AATCC-------TTG-------------TCCCT----GA----CAGGTT-T--TA--T----AA
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 1
s Aotus_azarae.k141_3104676                                  15913 30 -     33861 ATT-TA---CGTCC-------CTG-------------TCATG----GG----CAGATT-T--TA--T------
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            15957 30 -     34016 ATT-TA---CGTCC-------CTG-------------TCATG----GG----CAGATT-T--TA--T------
i Aotus_griseimembra.k141_2240599                        C 0 I 2
s Aotus_nancymaae.KZ198451.1                               4298337 30 -   5030052 ATT-TA---CGTCC-------CTG-------------TCATG----GG----CAGATT-T--TA--T------
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             15946 30 -     34685 ATT-TA---CGTCC-------CTG-------------TCATG----GG----CAGATT-T--TA--T------
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               29071 30 -     47192 ATT-TA---CGTCC-------CTG-------------TCATG----GG----CAGATT-T--TA--T------
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      12909 32 +     20879 ATT-TA---TGTCC-------CTG-------------TCCCT----GA----TAGATT-T--TA--T----AA
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 21
s Arctocebus_calabarensis.k141_2318572                       11757 32 +     14667 ATT-TA---TGTCC-------CTG-------------TCTCT----GA----CAGATT-C--TA--T----AG
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5048 30 +     43469 --T-CA---AATCC-------TTG-------------TCCCT----GA----CAGGTT-T--TA--T----AA
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 1
s Avahi_laniger.k141_765380                                  53991 32 -     92717 ATT-TA---TGTCC-------CTG-------------TCCCT----GA----CAGATT-T--TA--T----AA
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54612 32 +     85213 ATT-TA---TGTCC-------CTG-------------TCCCT----GA----CAGATT-T--TA--T----AA
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             5758 31 -     10423 ATT-TA---TGTCC-------CTG-------------TCACA----GG----CAGATT-T--TA--T----A-
i Callibella_humilis.k141_1278103                        C 0 I 1
s Callimico_goeldii.k141_1091182                             25227 31 +     31915 ATT-TA---CGTCC-------CTG-------------TCATG----GG----CAGATT-T--TA--T----A-
i Callimico_goeldii.k141_1091182                         C 0 I 1
s Callithrix_jacchus.pat_scaffold_3                       23590912 31 - 189096842 ATT-TA---TGTCC-------CTG-------------TCACG----GG----CAGATT-T--TA--T----A-
i Callithrix_jacchus.pat_scaffold_3                      C 0 I 1
s Callithrix_kuhlii.k119_1168854                               311 31 -     12329 ATT-TA---TGTCC-------CTG-------------TCACG----GG----CAGATT-T--TA--T----A-
i Callithrix_kuhlii.k119_1168854                         C 0 I 1
s Camelus_bactrianus.KN276810.1                           10002662 30 -  17673402 --G-TA---TGACC-------TTG-------------TCCCT----GA----TAGATT-T--TG--T----AA
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2335138 30 -   7040546 --G-TA---TGACC-------TTG-------------TCCCT----GA----TAGATT-T--TG--T----AA
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  403435 30 -   1652518 --G-TA---TGACC-------TTG-------------TCCCT----GA----TAGATT-T--TG--T----AA
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17799477 25 -  60362399 --T-CA---CACCC-------CTA-------------TCCCT----GA----CAGATT-T-------------
i CanFam4.chr16                                          C 0 I 2
s Canis_lupus_VD.CanFam_VD_scaffold_27089                      225 25 -     43241 --T-CA---CACCC-------CTA-------------TCCCT----GA----CAGATT-T-------------
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 I 2
s Canis_lupus_dingo.QKWQ01000480.1                         9034920 25 -   9314153 --T-CA---CACCC-------CTA-------------TCCCT----GA----CAGATT-T-------------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 2
s Canis_lupus_familiaris.chr16                            17959396 25 -  59632846 --T-CA---CACCC-------CTA-------------TCCCT----GA----CAGATT-T-------------
i Canis_lupus_familiaris.chr16                           C 0 I 2
s Canis_lupus_orion.HG994398.1                            18500697 25 +  63665305 --T-CA---CACCC-------CTA-------------TCCCT----GA----CAGATT-T-------------
i Canis_lupus_orion.HG994398.1                           C 0 I 2
s Capromys_pilorides.CapPil_scaffold_65020                    1362 11 -     12242 -----------------------------------------------C----TATATT-T--TA--T------
i Capromys_pilorides.CapPil_scaffold_65020               I 6 C 0
s Carlito_syrichta.NW_007259797.1                           156290 31 -    496798 ATG-TA---TGT-C-------CCG-------------TCCTT----GA----CAGATC-T--TG--T----AA
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5411 30 -     11696 --T-CA---AATCC-------TTG-------------TCCCT----GA----CAGGTT-T--TT--T----AA
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 1
s Castor_canadensis.CasCan_scaffold_2074                    137372 32 +    179628 ATT-TG---CGTCC-------CTG-------------TCTCT----GA----CAGATT-T--TA--G----AA
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 2
s Catagonus_wagneri.CatWag_scaffold_2839                     93370 29 +    217609 ----CT---AGTCC-------CTG-------------TCCCT----GA----CAGATT-T--TA--T----AA
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                         10393 31 -     11392 ATT-TA---TGTCC-------CTG-------------TCACT----GG----CAGATT-T--TA--T----A-
i Cebuella_niveiventris.k141_1251222                     C 0 I 1
s Cebuella_pygmaea.k141_1309012                               6461 31 -      7577 ATT-TA---TGTCT-------CTG-------------TCACG----GG----CAGATT-T--TA--T----A-
i Cebuella_pygmaea.k141_1309012                          C 0 I 1
s Cebus_albifrons.Contig27                                25653127 29 +  26074798 ATT-TA---TGTCC-------CTG-------------TCAC-----AG----CAGATT-T--TA--T------
i Cebus_albifrons.Contig27                               C 0 I 1
s Cebus_olivaceus.k141_1764483                                1065 29 +     28840 ATT-TA---TGTCC-------CTG-------------TCAC-----GG----CAGATT-T--TA--T------
i Cebus_olivaceus.k141_1764483                           C 0 I 1
s Cebus_unicolor.k141_1837183                                  790 29 +     14051 ATT-TA---TGTCC-------CTG-------------TCAC-----GG----CAGATT-T--TA--T------
i Cebus_unicolor.k141_1837183                            C 0 I 1
s Cephalopachus_bancanus.k141_1423433                         5788 31 +     31688 ATG-TA---TGT-C-------CCG-------------TCCTT----GA----CAGATC-T--TG--T----AA
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12231756 32 +  27778364 --T-TA---CATCC-------CTG-------------TCCCT----GG----CAGATT-TTATA--A----AA
i Ceratotherium_simum.JH767749.1                         I 27 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2783 32 -     25243 --T-TA---CATCC-------CTG-------------TCCCT----GG----CAGATT-TTATA--A----AA
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 27 I 1
s Cercocebus_atys.KQ010504.1                               4475982 32 +   4669795 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                         486 32 +     17872 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           1143 32 -     14043 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9176 32 +     27781 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         9342 32 -     20310 ATT-TA---TGTCT-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          12322 32 +     29689 ATT-TA---TGTCT-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7073 32 -     20078 ATT-TA---TGTCT-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          14990 32 -     27936 ATT-TA---TGTCT-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            3860 32 -     17152 ATT-TA---TGTCT-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38817401 32 +  39242232 ATT-TA---TGTCT-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223091 32 -  21565898 ATT-TA---TGTCT-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40209 32 -     53127 ATT-TA---TGTCT-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                         460 32 +     13442 ATT-TA---TGTCT-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15009 32 -     27947 ATT-TA---TGTCT-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         14985 32 +     17596 ATT-TA---TGTCT-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          1032 32 +     14005 ATT-TA---TGTCT-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             837 21 -      8501 A-TTTG---CATCC-------GTG-------------CTC-T----TA----TA-------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 I 1
s Cheirogaleus_major.k141_333249                             21361 32 -     52598 ATT-TA---TGTCC-------CTG-------------TCCCT----GA----CAGACT-T--TG--T----AA
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16726 32 +     57038 ATT-TA---TGTCC-------CTG-------------TCCCT----GA----CAGACT-T--TG--T----AA
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1253105 30 +   2543920 GTT-TA---TGTCT-------TTG-------------TCCAT----GA----CAGATT-A--TA--T------
i Chinchilla_lanigera.JH722012.1                         C 0 I 2
s Chiropotes_albinasus.k141_2206961                            659 30 -     15524 ATT-TA---TGTCC-------CTG-------------TCATG----GG----CAGATT-T--TA--T------
i Chiropotes_albinasus.k141_2206961                      C 0 I 2
s Chlorocebus_aethiops.ctg25                              18428969 32 -  18827391 ATT-TA---TGTCT-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15406 32 -     50209 ATT-TA---TGTCT-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422406 32 + 135778131 ATT-TA---TGTCT-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 18602 32 +     19366 A-TTTA---TATCC-------CTG-------------CTCCT----TA----TAGATT-T--TA--T----AA
i Choloepus_didactylus.ChoDid_scaffold_45914             I 37 I 1
s Choloepus_hoffmanni.KN194906.1                            173679 32 +    839153 A-TTTA---CATCC-------CTG-------------CTCCT----TA----CAGATT-T--TA--T----AA
i Choloepus_hoffmanni.KN194906.1                         I 37 I 1
s Colobus_angolensis.KN981557.1                            1910919 32 +   2368649 ATT-TA---TGTCC-------TAG-------------TCCCT----GA----CAGATT-T--TG--T----AA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949171 32 + 200372422 ATT-TA---TGTCC-------TAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37453 32 +     84244 ATT-TA---TGTCC-------TAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17548382 23 -  53390261 -------------C-------CTG-------------TCCCT----GA----AGGATG-G--TA--C----CA
i Condylura_cristata.JH655891.1                          I 1 I 1
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14708 30 -     20389 --T-CA---CATTC-------TCG-------------TCCCC----AA----CAGATT-T--TA--T----GA
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 1
s Cricetomys_gambianus.CriGam_scaffold_18520                 50485 32 +     63868 ACT-CA---CTTCC-------TTG-------------TCCCT----GA----CACATT-G--TA--T----AA
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 1
s Cricetulus_griseus.LT883664.1                           11667837 32 + 224834208 ACT-CA---GGTCC-------CTG-------------TCTCT----GA----CACATT-A--TA--T----AA
i Cricetulus_griseus.LT883664.1                          C 0 I 2
s Crocidura_indochinensis.CroInd_scaffold_37019               3293 24 -     19598 --T-TC---CATCC-------CTG-------------TCTCT----GG----CATATT---------------
i Crocidura_indochinensis.CroInd_scaffold_37019          I 3 I 2
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28799 25 -     87169 --T-TA---CATCC-------CTG-------------TCCCT----GA----CAGATT-T-------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 2
s Ctenodactylus_gundi.CteGun_scaffold_65                    837373 34 +   1526836 ATT-TA---TGTTC-------CTG-------------TTCCA----GATAGATAGATT-T--TA--T------
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 4
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  36228 30 +     51376 ATT-TA---TGTCC-------CTG-------------TCCCT----GA----TATACT-T--TA--T------
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            63844 30 +   2246927 G---TG---CACCT-------CTG-------------CTCCT----GA----CAGAGT-T--CA--T----AA
i Dasypus_novemcinctus.JH564415.1                        C 0 I 1
s Daubentonia_madagascariensis.ctg71                      12537584 32 -  12879189 GTT-TA---TGTTC-------CTG-------------TCCCT----GA----CAGGTT-T--TA--T----AA
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630428 30 +  20541912 --T-CA---AATCC-------CTG-------------ACCCT----GA----CAGATT-T--TA--T----AA
i Desmodus_rotundus.KZ672289.1                           C 0 I 1
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673607 29 +   1390856 --T-TA---CATCC-------CTG-------------TCCCT----GG----CAGATT-TTATA---------
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 27 I 2
s Diceros_bicornis.DicBicMic_scaffold_5955                    6356 30 +    198055 --T-TA---CATCC-------CTG-------------TCCCT----GG----CAGATT-TTATA--A------
i Diceros_bicornis.DicBicMic_scaffold_5955               I 27 I 3
s Dinomys_branickii.DinBra_scaffold_21862                    36691 30 +     67921 ATT-TA---TGTCT-------CTG-------------TCCAT----AA----TGGATT-G--TG--T------
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 2
s Echinops_telfairi.JH980293.1                            48780891 33 + 111700974 A-T-TA---TTTCC-------CTG-------------Cccct----aa----tatatt-t--tattt----tt
i Echinops_telfairi.JH980293.1                           C 0 I 1
s Eidolon_helvum.KE759718.1                                  10833 30 +     11740 --T-TA---CATCC-------TTG-------------TGCTT----GA----CAGATT-T--CA--T----AA
i Eidolon_helvum.KE759718.1                              C 0 I 1
s Elephantulus_edwardii.JH947257.1                         1097953 31 +  10337057 A-T-TA---TATCC-------CTG-------------TTCCT----AA----CAGATT-G--TG--G----AA
i Elephantulus_edwardii.JH947257.1                       C 0 I 3
s Ellobius_lutescens.LOEQ01008920.1                          20561 32 -    110024 ACT-CA---GGTCC-------CTG-------------TCCCT----GA----CACTTT-G--TA--T----AA
i Ellobius_lutescens.LOEQ01008920.1                      I 38 I 2
s Ellobius_talpinus.LOJH01081419.1                             692 32 +      8657 ACT-CA---GGTCC-------CTG-------------TCCCT----GA----CACATT-G--TA--T----AA
i Ellobius_talpinus.LOJH01081419.1                       I 38 I 2
s Enhydra_lutris.KZ291758.1                               16329627 14 -  41312741 -----------------------------------------TGTCTGA----CAGGTT-T-------------
i Enhydra_lutris.KZ291758.1                              I 35 I 2
s Eptesicus_fuscus.JH977646.1                              2146035 30 -  14770903 --T-CA---AATCC-------CTG-------------TCCCT----GA----CAGACT-G--TA--T----AA
i Eptesicus_fuscus.JH977646.1                            C 0 I 1
s Equus_asinus.JREZ01000139.1                              1283861 32 +   4378816 --T-TA---CATCC-------CTG-------------TCCGT----GA----CAGGTT-TTATA--A----AA
i Equus_asinus.JREZ01000139.1                            I 26 I 1
s Equus_caballus.CM000403.2                               18531681 32 -  39960074 --T-TA---CATCC-------CTG-------------TCCGT----GA----CAGGTT-TTATA--A----AA
i Equus_caballus.CM000403.2                              I 26 I 1
s Equus_przewalskii.KK951119.1                               33710 32 +    498745 --T-TA---CATCC-------CTG-------------TCCGT----GA----CAGCTT-TTATA--A----AA
i Equus_przewalskii.KK951119.1                           I 26 I 1
s Erinaceus_europaeus.JH835339.1                           3328505 34 -   7059049 --T-TA---TATCT-------CTA-------------TCCct----ga----cagatt-t--ta--tttttaa
i Erinaceus_europaeus.JH835339.1                         I 17 I 1
s Erythrocebus_patas.Contig38                             21205574 32 -  21539334 ATT-TA---TGTCT-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_342033                              14073 32 -     14127 ATT-TA---TGTCC-------CTG-------------TCCCT----GA----CAGACT-T--TA--T----AA
i Eulemur_albifrons.k141_342033                          I 131 n 32
s Eulemur_collaris.k141_377015                                6787 32 -     16928 ATT-TA---TGTCC-------CTG-------------TCCCT----GA----CAGACT-T--TA--T----AA
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15819 32 -     25546 ATT-TA---TGTCC-------CTG-------------TCCCT----GA----CAGACT-T--TA--T----AA
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            13015 32 +     26330 ATT-TA---TGTCT-------CTG-------------TCCCT----GA----CAGACT-T--TA--T----AA
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14250 32 +     23973 ATT-TA---TGTCC-------CTG-------------TCCCT----GA----CAGACT-T--TA--T----AA
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                13012 32 +     75513 ATT-TA---TGTCT-------CTG-------------TCCCT----GA----CAGACT-T--TA--T----AA
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10942 32 +     97555 ATT-TA---TGTCC-------CTG-------------TCCCT----GA----CAGACT-T--TA--T----AA
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              433 32 +     13026 ATT-TA---TGTCT-------CTG-------------TCCCT----GA----CAGACT-T--TA--T----AA
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4486 32 -     17153 ATT-TA---TGTCC-------CTG-------------TCCCT----GA----CAGACT-T--TA--T----AA
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              14059 32 +    111500 ATT-TA---TGTCC-------CTG-------------TCCCT----GA----CAGACT-T--TA--T----AA
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237255 25 + 206538554 --T-TA---CATCC-------TTG-------------TCCCT----GA----CAGATT-T-------------
i Felis_catus.CM001381.2                                 C 0 I 2
s Felis_catus_fca126.CM031415.1                           20196098 25 + 205367284 --T-TA---CATCC-------TTG-------------TCCCT----GA----CAGATT-T-------------
i Felis_catus_fca126.CM031415.1                          C 0 I 2
s Felis_nigripes.FelNig_flattened_line_20823                  9851 25 -     36744 --T-TA---CATCC-------TTG-------------TCCCT----GA----CAGATT-T-------------
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 2
s Fukomys_damarensis.KN121974.1                             850732 31 +   3816255 ATT-TG---TGTCC-------CTT-------------TCCCT----GA----CAGATTTT--TA--C------
i Fukomys_damarensis.KN121974.1                          C 0 I 2
s Galago_moholi.ctg2040                                     426905 32 -    453645 ATT-TA---TGTTC-------CTG-------------TCTCT----GA----CAGATT-T--TA--T----AG
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4595 32 +     11339 ATT-TA---TGTTC-------CTG-------------TCTCT----GA----CAGATT-C--TA--T----AG
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            1893 32 +     41679 ATT-TA---TGTCC-------CTG-------------TCTCT----GA----CAGATT-C--TA--T----AG
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1490 32 -      9135 ATT-TA---TGACC-------ATG-------------TCCCT----GA----CAGATT-T--TA--C----AA
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 I 2
s Glis_glis.GliGli_scaffold_19807                            31651 30 +     49224 ATT-TT---TGTCC-------CTG-------------TCCCT----GA----CAGATT-T--TA--C------
i Glis_glis.GliGli_scaffold_19807                        C 0 I 2
s Gorilla_beringei.k141_3596273                              16378 32 -     32273 ATT-TA---TGTCC-------CTG-------------TCCCT----GG----CAGATT-T--TA--T----AA
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186338515 32 + 186649187 ATT-TA---TGTCC-------CTG-------------TCCCT----GG----CAGATT-T--TA--T----AA
i Gorilla_gorilla.LT578341.1                             C 0 I 49
s Graphiurus_murinus.GraMur_scaffold_10447                   32901 32 +     78134 ATT-TT---TGTCC-------CTG-------------TCCCT----GA----CAGATT-T--TA--T----AA
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 2
s Hapalemur_alaotrensis.k141_170648                           7118 32 -     19426 ATT-TA---TGTCC-------CTG-------------TCCCT----GA----CAGACT-T--TA--T----AA
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12267 32 -     15286 ATT-TA---TGTCC-------CTG-------------TCCCT----GA----CAGACT-T--TA--T----AA
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13906 32 +     18253 ATT-TA---TGTCC-------CTG-------------TCCCT----GA----CAGACT-T--TA--T----AA
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         14007 32 -     41752 ATT-TA---TGTCC-------CTG-------------TCCCT----GA----CAGACT-T--TA--T----AA
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13844 32 -     16460 ATT-TA---TGTCC-------CTG-------------TCCCT----GA----CAGACT-T--TA--T----AA
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242633 25 +    327341 --T-TA---CATCC-------CTG-------------TCCCT----GA----CAGATT-T-------------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 2
s Heterocephalus_glaber.JH602082.1                        20662498 30 +  22651954 ATT-TA---TGTCC-------CTG-------------TCCCT----GA----TAGATT-T--TA--C------
i Heterocephalus_glaber.JH602082.1                       C 0 I 2
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1190 30 +      7595 A-T-TA---CATTT-------CTG-------------TCCAT----G-----CAGACT-T--TA--T----AA
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 I 1
s Hoolock_leuconedys.ctg274                                    435178 32 +    630532 ATT-TA---TGTCC-------GTG-------------TCCCT----GG----CAGATT-T--TA--T----AA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45327 25 +     55795 --T-TA---CATCC-------CTG-------------TCCCT----GA----CAGAGT-G-------------
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 2
s Hystrix_cristata.HysCri_scaffold_5660                      83402 22 +    135385 -------------C-------CTG-------------TCTAT----GA----AAGATT-T--TA--T----A-
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 1
s Ictidomys_tridecemlineatus.JH393364.1                    7521182 31 -   7955117 ATT-TA---TGTCC-------CTG-------------TCCCT----GA----TAGATT-T--TA--T----A-
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 1
s Indri_indri.k141_3655594                                   22804 32 +     31101 ATT-TA---TGTCC-------CTG-------------TCCCT----GA----CAGATT-T--TA--T----AA
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8277088 32 -   9596543 ATT-TA---TGCCC-------CTG-------------TGCCT----GA----CAGATT-A--TA--T----AA
i Jaculus_jaculus.JH725527.1                             C 0 I 2
s Lasiurus_borealis.LasBor_scaffold_32767                    16680 30 -     42476 --T-CA---CATCC-------CTG-------------TCCCC----GA----CAGCCT-G--TA--T----CA
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 51
s Lemur_catta.scaffold_24                                 15524359 32 -  30322482 ATT-TA---TGTCC-------CTG-------------TCCCT----GA----CAGACT-T--TA--T----AA
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        8037 31 +     64341 ATT-TA---TGTCC-------CTG-------------TCATG----GG----CAGATT-T--TA--T----A-
i Leontocebus_fuscicollis.k141_1820339                   C 0 I 1
s Leontocebus_illigeri.k141_1304848                            377 31 -     35062 ATT-TA---TGTCC-------CTG-------------TCATG----GG----CAGATT-T--TA--T----A-
i Leontocebus_illigeri.k141_1304848                      C 0 I 1
s Leontocebus_nigricollis.k141_4610752                        8065 31 +     35603 ATT-TA---TGTCC-------CTG-------------TCATG----GG----CAGATT-T--TA--T----A-
i Leontocebus_nigricollis.k141_4610752                   C 0 I 1
s Leontopithecus_chrysomelas.k141_1519602                    29481 31 +     38576 ATT-TA---TGTCC-------CTG-------------TCAGG----GG----CAGATT-T--TA--T----A-
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         26181 31 +     66356 ATT-TA---TGTCC-------CTG-------------TCAGG----GG----CAGATT-T--TA--T----A-
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         11251 32 -     23766 ATT-TA---TGTCC-------CTG-------------TCCCT----GA----CAGATT-T--TA--T----AA
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29312 32 +     45836 ATT-TA---TGTCC-------CTG-------------TCCCT----GA----CAGATT-T--TA--T----AA
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1850 32 +     25010 ATT-TA---TGTCC-------CTG-------------TCCCT----GA----CAGATT-T--TA--T----AA
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27248 32 +     54090 ATT-TA---TGTCC-------CTG-------------TCCCT----GA----CAGATT-T--TA--T----AA
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3043359 25 +   3914936 --T-TA---CATCT-------CGG-------------TCTCT----CC----CAGATT-G-------------
i Leptonychotes_weddellii.KB714746.1                     C 0 I 2
s Lepus_americanus.LepAme_scaffold_107385                     6781 27 -     14121 ATT-TA---CGTCC-------CTG-------------CCTCT----GA----CAGCTT-T-------------
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 2
s Lophocebus_aterrimus.ctg367                              1437527 32 +   1826925 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            6154 31 +     11245 ATT-TA---TGTCC-------CT--------------TCTCT----GA----CAGATT-C--TA--T----AG
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1004974 32 +   6120653 ATT-TA---TGTCC-------CTG-------------TCTCT----GA----CAGATT-C--TA--T----AG
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4217620 31 -  43346337 G-T-TA---CATCC-------CTA-------------GCcat----aa----caaatt-t--ta--t----aa
i Loxodonta_africana.GL010049.1                          C 0 I 1
s Lycaon_pictus.CM007581.1                                17955636 25 -  59628241 --T-CA---CACCC-------CTA-------------TCCCT----GA----CAGATT-T-------------
i Lycaon_pictus.CM007581.1                               C 0 I 2
s Macaca_arctoides.k141_2326796                               7340 32 +     40492 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59676599 32 +  60120075 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13115 32 -     26193 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            80899 32 -    114318 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  6586 32 -     23192 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16059 32 -     29190 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  24624 32 +     37952 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186839713 32 + 187317192 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458276 32 -  25927173 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  80472 32 +     89720 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 7473 32 +     20474 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   7273 32 -     14993 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  330139 32 -    668171 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 5586 32 -     24072 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26211 32 -     45290 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90925 30 +     94391 --T-TA---CATCC-------CTG-------------TTCTT----AA----CAGATT-T--TA--T----AA
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 1
s Mandrillus_leucophaeus.scaffold280                      23937802 32 -  24302211 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----TAGATT-T--TG--T----AA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               351926 32 +    752769 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----TAGATT-T--TG--T----AA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              18807 39 +    737560 --T-TA---CATCTCTGATCTCTG-------------TCCCT----GA----CAGACT-TGATA--A----AA
i Manis_javanica.JSZB01003497.1                          I 26 I 1
s Manis_pentadactyla.KN006162.1                              50800 32 -    317179 --T-TA---CATCT-------CAG-------------TCCCT----GA----CAGACT-TTATA--A----AA
i Manis_pentadactyla.KN006162.1                          I 26 I 1
s Marmota_marmota.CZRN01000018.1                          33103381 31 -  40650429 ATT-TA---TGTCC-------CTG-------------TCACT----GA----TAGATT-T--TA--T----A-
i Marmota_marmota.CZRN01000018.1                         C 0 I 1
s Megaderma_lyra.MegLyr_scaffold_4542                        10747 29 -    207569 --T-TA---CATTC-------GTG-------------TCCCT----GA----CAGGTT-T--TA--T----A-
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10366 10 +     13704 -----------------------------------------T----GA----CAGATT-T-------------
i Mellivora_capensis.MelCap_flattened_line_69365         I 35 I 2
s Meriones_unguiculatus.MerUng_scaffold_7390                 33026 31 +    140813 AGT-CA---TGTCC-------CTG-------------TCCC-----GA----CACATG-G--AA--T----AA
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 2
s Mesocricetus_auratus.KB708134.1                         12182512 32 -  29670104 ACT-CA---GGTAC-------CTG-------------TCCCT----GA----CACATT-G--TA--T----AA
i Mesocricetus_auratus.KB708134.1                        C 0 I 2
s Mico_argentatus.k141_1239457                                6272 31 -      7380 ATT-TA---TGTCC-------CTG-------------TCACG----GG----CAGATT-T--TA--T----A-
i Mico_argentatus.k141_1239457                           C 0 I 1
s Mico_humeralifer.k141_2457295                                501 31 +      1079 ATT-TA---TGTCC-------CTG-------------TCACG----GG----CAGATT-T--TA--T----A-
i Mico_humeralifer.k141_2457295                          C 0 I 1
s Mico_schneideri.k141_1950671                                      6284 31 -      7356 ATT-TA---TGTCC-------CTG-------------TCACG----GG----CAGATT-T--TA--T----A-
i Mico_schneideri.k141_1950671                                 C 0 I 1
s Microcebus_murinus.CM007674.1                           18291785 32 -  93316391 ATT-TA---TGTCC-------CTG-------------TCCCT----GA----CAGACT-T--TA--T----AA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    22642 33 -    145209 A-G-TA---TTTCC-------CTG-------------TTCCT----AA----CATATT-T--TACTT----GT
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 1
s Micronycteris_hirsuta.MicHir_scaffold_52381                15953 30 -     19307 --T-CA---AATCC-------CTG-------------TCCCT----GA----CAGATT-T--TA--T----AA
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 1
s Microtus_ochrogaster.CM001695.1                         11260740 32 -  27267610 ACT-CA---GGTCC-------CTG-------------TCTCT----GA----CACATT-G--TA--T----AA
i Microtus_ochrogaster.CM001695.1                        I 38 I 2
s Miniopterus_natalensis.LDJU01000034.1                    1850907 30 +   8254450 --G-CA---AACCC-------CTG-------------TCCCT----GA----CAGGTT-T--TA--C----TG
i Miniopterus_natalensis.LDJU01000034.1                  I 65 I 1
s Miniopterus_schreibersii.MinSch_scaffold_18080             34588 30 +     64694 --A-CA---AACCC-------CTG-------------TCCCT----GA----CAGGTT-T--TA--C----AG
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 65 I 1
s Miopithecus_ogouensis.k141_534055                           9508 32 -     28506 ATT-TA---TGTTT-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6227 25 -      8324 --T-TA---CATCT-------CTG-------------TCTCT----CA----CAGACT-G-------------
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 2
s Mirza_zaza.k141_952172                                      9329 32 -     37649 ATT-TA---TGTCC-------CTG-------------TCCCT----GA----CAGACT-T--TA--T----AA
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141932 29 -    366855 --T-CA---AATC--------CTG-------------TCCCT----GA----CACGTT-T--TG--T----AA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 1
s Mungos_mungo.MunMun_flattened_line_23663                   35733 25 +     37127 --T-TA---CATCC-------CTG-------------TCCCT----GA----CAGATT-T-------------
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 2
s Murina_feae.MurFea_scaffold_85699                           7130 30 +     14753 --T-CA---AATCC-------CTG-------------TCCCT----GA----CAGACT-G--TG--T----AA
i Murina_feae.MurFea_scaffold_85699                      C 0 I 1
s Mus_caroli.LT608237.1                                   84361632 32 - 120012414 TCT-CA---TGTCC-------CTG-------------TCCCT----AA----CACATC-G--CA--T----AA
i Mus_caroli.LT608237.1                                  C 0 I 2
s Mus_musculus.chr8                                       87650631 32 - 129401213 TCT-CA---TGTCC-------CTG-------------TCCCT----AA----CACATC-G--CA--T----AA
i Mus_musculus.chr8                                      C 0 I 2
s Mus_pahari.LT608297.1                                   31355290 32 -  89631738 TCT-CA---AGTCC-------CTG-------------TCCCT----AA----CACATT-G--CA--T----AA
i Mus_pahari.LT608297.1                                  C 0 I 2
s Mus_spretus.CM004101.1                                  90752692 32 - 130317789 TCT-CA---TGTCC-------CTG-------------TCCCT----AA----CACATC-G--CA--T----AA
i Mus_spretus.CM004101.1                                 C 0 I 2
s Muscardinus_avellanarius.MusAve_scaffold_82313              5237 22 +     14296 ---------------------CTG-------------TCCCT----GA----TGGATT-T--TA--T----AA
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 4 I 2
s Mustela_putorius.JH418006.1                               301770  9 -  14710649 --T-TA---TATCC-------C---------------------------------------------------
i Mustela_putorius.JH418006.1                            I 26 I 12
s Myocastor_coypus.MyoCoy_scaffold_10123                     71543 30 -     80779 ATT-TA---GGTCC-------CTG-------------TGCCT----GA----TATATT-T--TA--T------
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                280774 30 -  10118263 --T-CA---AATCC-------CTG-------------TCCCT----GA----CAGACT-G--TA--T----AA
i Myotis_brandtii.KE162005.1                             C 0 I 1
s Myotis_davidii.KB100139.1                                1588030 30 -   6019432 --T-CA---AATCC-------CTG-------------TCCCT----GA----CAGACT-G--TA--T----AA
i Myotis_davidii.KB100139.1                              C 0 I 1
s Myotis_lucifugus.GL429869.1                              3904128 30 -   4330536 --T-CA---AATCC-------CTG-------------TCCCT----GA----CAGACT-G--TA--T----AA
i Myotis_lucifugus.GL429869.1                            C 0 I 1
s Myotis_myotis.MyoMyo_scaffold_281845                         277 30 +      1835 --T-CA---AATCC-------CTG-------------TCCCT----GA----CAGACT-G--TA--T----AA
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 I 1
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189553 32 +    196477 A-TTTA---CATCC-------CTG-------------CTTCT----TA----CAGATT-T--TA--C----AA
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 I 1
s Nannospalax_galili.KL204047.1                            2034356 32 -   3037898 ATT-TA---TGTCC-------CTA-------------TCCCT----GA----CAGGCT-G--TA--T----GA
i Nannospalax_galili.KL204047.1                          C 0 I 2
s Nasalis_larvatus.k141_413338                               15510 32 +     21681 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20307813 25 +  31847680 --T-TA---CATCT-------CTG-------------TCTCT----CA----CAGATT-G-------------
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 2
s Noctilio_leporinus.NocLep_scaffold_251                    758183 29 +    783361 ----CA---AATCC-------CTG-------------TTCCT----GG----CAAATT-T--TA--T----AA
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 1
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149704 25 -   9404916 --T-CA---CAGCC-------CTA-------------TCCCT----GA----CAGATT-T-------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 2
s Nycticebus_bengalensis.LG01                            102586518 32 - 196305487 ATT-TA---TGACC-------CTG-------------TCTGT----GA----CAGATT-C--TA--T----AG
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              442 32 +      2075 ATT-TA---TGACC-------CTG-------------TCTGT----GA----CAGATT-C--TA--T----AG
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761873 32 + 199412804 ATT-TA---TGACC-------CTG-------------TCTGT----GA----CAGATT-C--TA--T----AG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1363839 27 +   3988456 ATT-TA---CATCC-------CTG-------------TCTTT----GA----CAGTTT-T-------------
i Ochotona_princeps.JH802162.1                           C 0 I 2
s Octodon_degus.JH651603.1                                  747151 30 +  11899542 ATT-TA---TGTCC-------CTG-------------TCCCT----GA----TATATT-T--TA--T------
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                              506958 25 -   2017862 --t-ta---tgtct-------ctg-------------tctct----ca----cagaTT-T-------------
i Odobenus_rosmarus.KB229312.1                           C 0 I 2
s Ondatra_zibethicus.OndZib_scaffold_46174                   25408 32 +     28053 ACT-CA---GGTCC-------CTG-------------TCCCT----GA----CACATT-G--TA--T----AA
i Ondatra_zibethicus.OndZib_scaffold_46174               I 38 I 2
s Onychomys_torridus.OnyTor_scaffold_2986                    80417 32 +    102263 CCT-CA---GGTCC-------CTG-------------TCCCT----AA----CACATT-G--TA--T----AA
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 2
s Orycteropus_afer.OryAfe_flattened_line_144387              10387 31 -     18566 A-T-TA---CGTCC-------CTG-------------TCCCT----AG----CAGATT-T--TC--T----AA
i Orycteropus_afer.OryAfe_flattened_line_144387          I 243 I 1
s Oryctolagus_cuniculus.CM000791.1                        67147641 27 + 174332312 ATT-TA---CGTCC-------CTG-------------CCTCT----GA----CAGCTT-T-------------
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 2
s Otocyon_megalotis.JAEUCK010005147.1                       462652 25 -    559221 --T-CA---CACCC-------CTA-------------TCCCT----GA----CAGATT-T-------------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 2
s Otolemur_crassicaudatus.k141_222918                         4425 32 +      8798 ATT-TA---TGTTC-------CTG-------------TCTCT----GA----CAGATT-C--TA--T----AG
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696588 32 -   1103335 ATT-TA---TGTTC-------CTG-------------TCTCT----GA----CAGATT-C--TA--T----AG
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    44466 32 +     80009 AAG-TA---TGTCC-------CTG-------------TCCCT----GG----CAGATT-T--TA--T----AA
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.KZ622849.1                                 22669 32 +    110857 ATT-TA---TGTCC-------CTG-------------TCCCT----GG----CAGATT-T--TA--T----AA
i Pan_troglodytes.KZ622849.1                             I 303 I 230
s Panthera_onca.PanOnc_flattened_line_3271                  151464 25 +    230217 --T-TA---CATCC-------TTG-------------TCCCT----GA----CAGATT-T-------------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 2
s Panthera_pardus.KV860321.1                                264673 25 +  18783137 --T-TA---CATCC-------TTG-------------TCCCT----GA----CAGATT-T-------------
i Panthera_pardus.KV860321.1                             C 0 I 2
s Panthera_tigris.KE722367.1                               4721552 25 -   8748460 --T-TA---CATCC-------TTG-------------TCCCT----GA----CAGATT-T-------------
i Panthera_tigris.KE722367.1                             C 0 I 2
s Papio_anubis.CM001495.2                                183443604 32 + 183742232 ATT-TA---TGTCT-------CAG-------------TCCCT----GG----CAGATT-T--TA--T----AA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7250 32 +     20448 ATT-TA---TGTCT-------CAG-------------TCCCT----GG----CAGATT-T--TA--T----AA
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20564062 32 +  20919399 ATT-TA---TGTCT-------CAG-------------TCCCT----GG----CAGATT-T--TA--T----AA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   5994 32 +     41871 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TA--T----AA
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     9287 32 +     27711 ATT-TA---TGTCT-------CAG-------------TCCCT----GG----CAGATT-T--TA--T----AA
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                   284 32 -     11374 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TA--T----AA
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12963 25 -     78924 --T-TA---TATCC-------CTG-------------TCCCT----GA----CAGACT-T-------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 2
s Perodicticus_ibeanus.k141_855320                           10401 32 +     13100 ATT-TA---TGTCC-------CTG-------------TCTCT----GA----CAGATT-C--TA--T----AG
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8807 32 +     25941 ATT-TA---TGTCC-------CTG-------------TCTCT----GA----CAGATT-T--TA--T----AG
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18195044 32 -  18517816 CCT-CA---GGTCC-------CTG-------------CCCCT----GA----CACATT-G--TA--T----AA
i Peromyscus_maniculatus.KI615324.1                      C 0 I 1
s Petromus_typicus.PetTyp_scaffold_42190                     28413 30 -     29689 ATT-TA---TGTCG-------CTG-------------TCCCT----GA----TGGATT-T--TA--C------
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 I 2
s Piliocolobus_badius.k141_1234363                           44001 32 +     62158 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        38748 32 +     89929 ATT-TA---TGTCC-------TAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40164 32 +     51399 ATT-TA---TGTCC-------TAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296402 32 -  14605196 ATT-TA---TGTCC-------TAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2069 30 +     22620 --T-CA---AATCC-------CTG-------------TCCCT----GA----CAGGCT-G--TA--T----AA
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 1
s Pongo_abelii.CM009266.2                                189131505 32 + 189387572 ATT-TA---TGTCC-------CTG-------------TCCCT----GG----CAGATT-T--TA--T----AA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9571112 32 +   9816681 ATT-TA---TGTCC-------CTG-------------TCCCT----GG----CAGATT-T--TA--T----AA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               73686 32 -     81375 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              5506 32 +     19060 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 13645 30 -     22811 A-T-TA---CGTTC-------CTG-------------TCCAT----G-----CAGATT-T--TA--T----AA
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 I 1
s Prolemur_simus.MPIZ01000396.1                            2597039 32 -   4620579 ATT-TA---TGTCC-------CTG-------------TCCCT----GA----CAGACT-T--TA--T----AA
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     991025 32 +   2598838 ATT-TA---TGTCT-------CTG-------------TCCCT----GA----CAGATT-T--TA--T----AA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29337 32 +     38485 ATT-TA---TGTCT-------CTG-------------TCCCT----GA----CAGATT-T--TA--T----AA
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1380 32 -     13098 ATT-TA---TGTCT-------CTG-------------TCCCT----GA----CAGATT-T--TA--T----AA
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26858 32 +     35766 ATT-TA---TGTCT-------CTG-------------TCCCT----GA----CAGATT-T--TA--T----AA
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           5045 32 -     24134 ATT-TA---TGTCT-------CTG-------------TCCCT----GA----CAGATT-T--TA--T----AA
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28870 32 -     67325 ATT-TA---TGTCT-------CTG-------------TCCCT----GA----CAGATT-T--TA--T----AA
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           5093 32 -      6182 ATT-TA---TGTCT-------CTG-------------TCCCT----GA----CAGATT-T--TA--T----AA
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            10670 32 -     21651 AGT-CA---TGTCC-------CTG-------------TCCCT----GA----CATATT-G--AA--T----AA
i Psammomys_obesus.NESX01036370.1                        C 0 I 2
s Pteronotus_parnellii.KE909381.1                            15383 30 -     21811 --T-CA---AATCC-------CTG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Pteronotus_parnellii.KE909381.1                        C 0 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40556 14 +     42204 -----------------------------------------TGTCTGA----CAGATT-T-------------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 35 I 2
s Pteropus_alecto.KB030862.1                              22977092 30 +  28871421 --T-TA---CATTC-------CTG-------------TCCTT----GA----CAGATT-T--TA--T----AA
i Pteropus_alecto.KB030862.1                             C 0 I 1
s Pteropus_vampyrus.KN534172.1                                7145 30 -      8028 --T-TA---CATTC-------CTG-------------TCCTT----GA----CAGATT-T--TA--T----AA
i Pteropus_vampyrus.KN534172.1                           C 0 I 1
s Puma_concolor.QAVW01001104.1                            20274620 25 -  38429054 --T-TA---CATCC-------TTG-------------TCCCT----GA----CAGATT-T-------------
i Puma_concolor.QAVW01001104.1                           C 0 I 2
s Pygathrix_cinerea.k141_1153803                             15492 32 -     91421 ATT-TA---TGTCC-------CGG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7609612 32 +   7812017 ATT-TA---TGTCC-------CGG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             15491 32 -     72585 ATT-TA---TGTCC-------CGG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53570890 32 +  90668790 TCT-CA---TGTCC-------CTG-------------TCCCT----AA----CACATT-G--CA--T----AA
i Rattus_norvegicus.chr16                                I 3 I 2
s Rhinopithecus_bieti.k119_217274                             7202 32 -     11128 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-C--TG--T----AA
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236551 32 - 195417433 GTT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-C--TG--T----AA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672207 32 +   7961872 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-C--TG--T----AA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88112 30 -     96226 --T-TA---CATCC-------CTG-------------ACCTT----GA----CAGATT-T--TA--T----AA
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 1
s Saguinus_bicolor.k141_8081                                   653 31 +     42994 ATT-TA---TGTCC-------CTG-------------TCATG----GG----CAGATT-T--TA--T----A-
i Saguinus_bicolor.k141_8081                             C 0 I 1
s Saguinus_imperator.k141_57697                                438 31 +      1030 ATT-TA---CGTCC-------CTG-------------TCATG----GG----CAGATT-T--TA--T----A-
i Saguinus_imperator.k141_57697                          C 0 I 1
s Saguinus_inustus.k141_3945547                                517 31 -      8737 ATT-TA---CGTCC-------CTG-------------TCATG----GG----CAGATT-T--TA--T----A-
i Saguinus_inustus.k141_3945547                          C 0 I 1
s Saguinus_midas.LG03                                    209470004 31 + 209938924 ATT-TA---TGTCC-------CTG-------------TCATG----GG----CAGATT-T--TA--T----A-
i Saguinus_midas.LG03                                    C 0 I 1
s Saguinus_mystax.k141_374627                                 8639 31 -      9399 ATT-TA---CGTCC-------CTG-------------TCATG----GG----CAGATT-T--TA--T----A-
i Saguinus_mystax.k141_374627                            C 0 I 1
s Saimiri_boliviensis.NW_024100920.1                     119951376 28 - 121099817 ATT-TA---TGTCC-------CTG-------------TCAC-----G-----CAGATT-T--TA--T------
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23718 28 +     46362 ATT-TA---TGTCC-------CTG-------------TCAC-----G-----CAGATT-T--TA--T------
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               23813 28 +     45824 ATT-TA---TGTCC-------CTG-------------TCAC-----G-----CAGATT-T--TA--T------
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             40492 28 -     64574 ATT-TA---TGTCC-------CTG-------------TCAC-----G-----CAGATT-T--TA--T------
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               3565 28 -     23631 ATT-TA---TGTCC-------CTG-------------TCAC-----G-----CAGATT-T--TA--T------
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 23709 28 -     61129 ATT-TA---TGTCC-------CTG-------------TCAC-----G-----CAGATT-T--TA--T------
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5421081 29 -   5703754 ATT-TA---TGTCC-------CTG-------------TCAC-----GG----CAGATT-T--TA--T------
i Sapajus_apella.ctg103                                  C 0 I 1
s Sapajus_macrocephalus.k141_351809                          56322 29 -     80660 ATT-TA---TGTCC-------CTG-------------TCAC-----GG----CAGATT-T--TA--T------
i Sapajus_macrocephalus.k141_351809                      C 0 I 1
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153494 30 -    313613 --T-TA---CATCC-------CTG-------------TCCCT----GA----CAGATG-G--TA--T----GA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 3 I 1
s Semnopithecus_entellus.k141_1672505                          383 32 -     12572 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27233 32 +     39453 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            7751 32 +     27826 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             7273 32 -     19483 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                       574 32 -     12762 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                            435 32 +     13763 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                      590 32 -     30804 ACT-CA---GGTCT-------CTG-------------TCCCT----GA----CACATT-G--TA--T----AA
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 I 1
s Solenodon_paradoxus.SolPar_flattened_line_126               4081 30 +   1910179 --T-TG---CATCC-------CAG-------------ACCCT----GA----CAGATT-T--TA--T----AA
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 1
s Sorex_araneus.JH798187.1                                13651317 30 -  18376816 --T-TC---CATCA-------CTG-------------TTCTT----GA----CAGATT-T--TA--T----AA
i Sorex_araneus.JH798187.1                               I 3 I 1
s Spermophilus_dauricus.KZ294078.1                         1954236 31 -   3870691 ATT-TA---TGTCC-------CTG-------------TCCCT----GA----TAAATT-T--TA--T----A-
i Spermophilus_dauricus.KZ294078.1                       C 0 I 1
s Spilogale_gracilis.SpiGra_flattened_line_13525             31045 25 +     97271 --T-TA---TATCC-------CTG-------------TCTCT----GA----CAGATT-C-------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 26 I 2
s Suricata_suricatta.SurSur_flattened_line_6629              18636 25 -    196729 --T-TA---CATCC-------CTG-------------TCCCT----GA----CAGATT-T-------------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 2
s Sus_scrofa.CM000828.4                                    6811117 29 +  69701581 ----CT---TGTCT-------TGG-------------TCCCT----GA----CAGATT-T--TA--T----AA
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                11121 30 +     41958 --T-CA---AATCC-------CGG-------------TCCCT----GA----CAGATT-G--TA--T----AA
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 1
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72912 32 +    116680 A-TTTG---CATCC-------CTG-------------CTCCT----TA----CAGATT-T--TA--C----AA
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 I 1
s Tapirus_indicus.TapInd_scaffold_9301                      119072 32 -    156842 --T-TA---CGTCT-------CTG-------------TCCCT----GA----CAGATT-TTATA--A----AA
i Tapirus_indicus.TapInd_scaffold_9301                   I 26 I 1
s Tapirus_terrestris.TapTer_scaffold_755                    387517 32 +    539355 --T-TA---CATCT-------CTG-------------TTCCC----GA----CAGATT-TTATA--A----AA
i Tapirus_terrestris.TapTer_scaffold_755                 I 26 I 1
s Tarsius_lariang.k141_2201908                               26781 31 +     70052 ATG-TA---TGT-C-------CTG-------------TCCTT----GA----CAGGTT-T--TA--T----AA
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1578 31 -     16117 ATG-TA---TGT-C-------CTG-------------TCCTT----GA----CAGGTT-T--TA--T----AA
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186428922 32 + 186847797 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TA--T----AA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105733 30 +    114563 ATT-TA---TGTCC-------CTG-------------GCCCT----GA----CGGATT-T--TA--C------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 2
s Tolypeutes_matacus.TolMat_scaffold_228639                   6714 22 +      8208 A-TTTG---CATCC-------CTG-------------CTCCT----TA----TA-------------------
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 I 1
s Tonatia_saurophila.TonSau_scaffold_294                     81502 30 +    610378 --T-CC---AATCC-------TTG-------------TCCCC----GA----TGGGTT-T--TA--T----AA
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 1
s Trachypithecus_auratus.k141_722599                         11324 32 -     20410 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                       438 32 -     12674 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       11425 32 +     19930 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       7836 32 -     19997 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            47975 32 -     60166 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        15447 32 -     27529 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     15391 32 -     18194 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9103 32 -     21137 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    7806 32 -     10723 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         6978 32 +      9834 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        25291 32 +     32220 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5939393 32 +   6242583 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        8644 32 +     20839 ATT-TA---TGTCC-------CAG-------------TCCCT----GG----CAGATT-T--TG--T----AA
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4293545 31 +  10818551 A-T-GA---CATCC-------CTG-------------TCCGT----AA----CAACTT-C--TA--T----AA
i Trichechus_manatus.JH594705.1                          C 0 I 1
s Tupaia_chinensis.KB320699.1                              2156110 30 +   4065304 ATT-TA---TGTCC-------CTC-------------TC-CT----GA----CAGATT-T--TA--T----A-
i Tupaia_chinensis.KB320699.1                            C 0 I 1
s Tupaia_tana.TupTan_flattened_line_97126                     9553 30 -     10553 ATT-TA---TGTCC-------CTC-------------TC-CT----GA----CAGATT-T--TA--T----A-
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 1
s Uropsilus_gracilis.UroGra_scaffold_12083                   53598 30 -     77625 --T-TA---CATAC-------CTG-------------TGCCT----GA----CAGATG-G--TA--G----AA
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 1
s Ursus_maritimus.KK499267.1                               4850749 25 -   5085361 --T-TA---CATCC-------CTG-------------TCTCT----GA----TAGATT-C-------------
i Ursus_maritimus.KK499267.1                             C 0 I 2
s Varecia_rubra.k141_590885                                  11704 32 +     50397 ATT-TA---TGTCC-------CTG-------------TCCCT----GA----CAGACT-T--TA--T----AA
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11763 32 +     24756 ATT-TA---TGTCC-------CTG-------------TCCCT----GA----CAGACT-T--TA--T----AA
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5372193 30 -   5488506 --G-TA---TGTCC-------TTG-------------TCCCT----GA----TAGATT-T--TG--T----AA
i Vicugna_pacos.KN270157.1                               C 0 I 1
s Vulpes_lagopus.VulLag_flattened_line_30954                 11100 25 -     43706 --T-CA---CAGCC-------CTA-------------TCCCT----GA----CAGATT-T-------------
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 2
s Xerus_inauris.XerIna_scaffold_2302                          1363 31 +    224448 ATC-TA---TGTCC-------CTG-------------TCTCC----AA----CAGATT-T--TA--T----A-
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 1
s Zalophus_californianus.ZalCal_flattened_line_17732          5675 25 +     86975 --T-TA---CGTCT-------CTG-------------TCTCT----CA----CAGATT-T-------------
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 2
s Zapus_hudsonius.ZapHud_scaffold_11398                      15185 32 +     63895 ATT-TA---TGTCC-------CTG-------------TGCCT----GA----CAGGTT-A--TA--T----AA
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 24 I 2
e Saguinus_labiatus.k141_285685                               8505  5 +      8564 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       7155 50 +     62944 G-AG--TTGTTAAC--------------------A-AGTTAAA--A-GAAGGTGATAG-C-T-T-TT--CACCTG---A---T--T---C--T---C-T---G
s Acinonyx_jubatus.LLWD01001279.1                           827640 50 -   1699592 --AC--TTATTTCC--------------------A-CGTTAAA--G-TAAGGTGATAG-G-C-T-TCT-CACCTG---A---T--T---C--T---T-T---C
i Acinonyx_jubatus.LLWD01001279.1                        I 2 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     71104 52 +     87051 G-AC--TCATTGCC--------------------A-TGTTAAA--G-TAACATGACGT-G-C-T-TTT-CACTTG---T---T--T---T--T---TTT---C
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 1 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510915 50 -  29979442 --AG--TTATTAGC--------------------A-AGTTAAA--A-TAAGGTGATAT-G-T-T-TCT-Cacctg---a---t--t---c--t---t-t---c
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 2 C 0
s Ailurus_fulgens.LNAC01001112.1                             79687 50 -    347723 --AG--TTATTAGC--------------------A-AGTTAAA--A-TAAGGTGATGT-G-C-T-TCT-CACCTG---A---T--T---C--T---T-T---C
i Ailurus_fulgens.LNAC01001112.1                         I 2 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     74821 51 -     89534 G-AG--TTATTAGC--------------------A-AGT-AAA--G-TAAGGTGATAT-G-C-T-TTT-CACTTG---A---T-TT---T--T---T-T---C
i Allactaga_bullata.AllBul_scaffold_9566                 I 2 C 0
s Allenopithecus_nigroviridis.k141_3361533                   15083 50 -     52922 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-T-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         14999 50 -     28001 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-T-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          5497 50 -     18505 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-T-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           6349 50 -     12518 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-T-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              7943 51 +     51355 G-AG--TTATTAGC--------------------A-AGTTAAT--C-AAAGGTGATAGGC-T-T-TT--CATCTG---A---T--T---C--C---C-T---G
i Alouatta_belzebul.k141_3560514                         I 2 C 0
s Alouatta_caraya.k141_1701091                                1052 51 -     36483 G-AG--TTATTAGC--------------------A-AGTTAAT--C-AAAGGTGATAGGC-T-T-TT--CATCTG---A---T--T---C--C---C-T---G
i Alouatta_caraya.k141_1701091                           I 2 C 0
s Alouatta_discolor.k141_566626                              11501 51 +     28687 G-AG--TTATTAGC--------------------A-AGTTAAT--C-AAAGGTGATAGGC-T-T-TT--CATCTG---A---T--T---C--C---C-T---G
i Alouatta_discolor.k141_566626                          I 2 C 0
s Alouatta_juara.k141_1302312                                   17 51 +     27940 G-AG--TTATTAGC--------------------A-AGTTAAT--C-AAAGGTGATAGGC-T-T-TT--CATCTG---A---T--T---C--C---C-T---G
i Alouatta_juara.k141_1302312                            I 2 C 0
s Alouatta_macconnelli.k141_918386                            1062 51 -      9457 G-AG--TTATTAGC--------------------A-AGTTAAT--C-AAAGGTGATAGGC-T-T-TT--CATCTG---A---T--T---C--C---C-T---G
i Alouatta_macconnelli.k141_918386                       I 2 C 0
s Alouatta_nigerrima.k141_1929159                               17 51 +     30492 G-AG--TTATTAGC--------------------A-AGTTAAT--C-AAAGGTGATAGGC-T-T-TT--CATCTG---A---T--T---C--C---C-T---G
i Alouatta_nigerrima.k141_1929159                        I 2 C 0
s Alouatta_palliata.k141_2135620                              4019 44 +     47717 G-AG--TTATTAGC--------------------A-AGTTAAT--C-AA-------AGGC-T-T-TT--CATCTG---A---T--T---C--C---C-T---G
i Alouatta_palliata.k141_2135620                         I 2 C 0
s Alouatta_puruensis.k141_362188                               744 51 +      5663 G-AG--TTATTAGC--------------------A-AGTTAAT--G-AAAGGTGATAGGC-T-T-TT--CATCTG---A---T--T---C--C---C-T---G
i Alouatta_puruensis.k141_362188                         I 2 C 0
s Alouatta_seniculus.k141_117119                             15196 51 +     50774 G-AG--TTATTAGC--------------------A-AGTTAAT--C-AAAGGTGATAGGC-T-T-TT--CATCTG---A---T--T---C--C---C-T---G
i Alouatta_seniculus.k141_117119                         I 2 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185687 50 +    412891 --AG--TTTTTAGC--------------------A-AGTTAAA--A-CATGGTAATAT-G-T-T-TTT-CATCTG---C---T--T---C--T---T-T---C
i Anoura_caudifer.AnoCau_scaffold_1412                   I 1 C 0
s Aotus_azarae.k141_3104676                                  15943 51 -     33861 G-AG--TTATTAGC--------------------A-AGTTAAA--C-GAAGGCGATAGGC-T-T-TT--CATCTG---A---T--T---C--T---C-T---G
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            15989 51 -     34016 G-AG--TTATTAGC--------------------A-AGTTAAA--T-GAAGGCGATAGGC-T-T-TT--CATCTG---A---T--T---C--T---C-T---G
i Aotus_griseimembra.k141_2240599                        I 2 C 0
s Aotus_nancymaae.KZ198451.1                               4298367 51 -   5030052 G-AG--TTATTAGC--------------------A-AGTTAAA--T-GAAGGCGATAGGC-T-T-TT--CATTTG---A---T--T---C--T---C-T---G
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             15976 51 -     34685 G-AG--TTATTAGC--------------------A-AGTTAAA--C-GAAGGCGATAGGC-T-T-TT--CATCTG---A---T--T---C--T---C-T---G
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               29101 51 -     47192 G-AG--TTATTAGC--------------------A-AGTTAAA--C-GAAGGCGATAGGC-T-T-TT--CATCTG---A---T--T---C--T---C-T---G
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      12962 23 +     20879 --------------------------------------------------GGCGATAT-G-C-T-TTT-CACTTG---A---T--T-----------------
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 21 I 4
s Arctocebus_calabarensis.k141_2318572                       11789 51 +     14667 A-AA--TTTTTAGC--------------------A-AGTTAAA--A-TAAGGTGATGG-G-A-TATT--CATCTG---A---T--T---C--T---C-T---C
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5079 48 +     43469 --AG--TTTTGAGC--------------------A-AGGTAAA--A-CATGGTGAT---G-T-T-TTT-CATCTG---C---T--T---C--G---T-T---C
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 1 C 0
s Avahi_laniger.k141_765380                                  54023 51 -     92717 G-AG--TTATTAGC--------------------A-AGTTAAA--A-TAAGATGATAG-G-CTT-TT--CATCTG---A---T--C---C--T---C-T---C
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54644 51 +     85213 G-AG--TTATTAGC--------------------A-AGTTAAA--A-TAAGATGATAG-G-CTT-TT--CATCTG---A---T--C---C--T---C-T---C
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             5790 51 -     10423 G-AG--TTATTAGC--------------------A-AGTTAAA--C-CAAGGCGATAGGC-T-T-TT--CATCTG---A---T--T---T--T---C-T---G
i Callibella_humilis.k141_1278103                        I 1 C 0
s Callimico_goeldii.k141_1091182                             25259 51 +     31915 G-AG--TTATTGGC--------------------A-AGTTAAA--T-GAAGGCGATAGGC-T-T-TT--CATCTC---A---T--T---C--T---C-T---G
i Callimico_goeldii.k141_1091182                         I 1 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590944 51 - 189096842 G-AG--TTATTAGC--------------------A-AGTTAAA--C-CAAGGCGATAGGC-T-T-TT--CATCTG---A---T--T---T--T---C-T---G
i Callithrix_jacchus.pat_scaffold_3                      I 1 C 0
s Callithrix_kuhlii.k119_1168854                               343 51 -     12329 G-AG--TTATTAGC--------------------A-AGTTAAA--C-CAAGGCGATAGGC-T-T-TT--CATCTG---A---T--T---T--T---C-T---G
i Callithrix_kuhlii.k119_1168854                         I 1 C 0
s Camelus_bactrianus.KN276810.1                           10002692 49 -  17673402 ---G--TTACCAGT--------------------G-AGCTAAA--A-TAAGGTGATAC-A-C-T-TT-CTACCTG---A---T--T---C--T---T-T---C
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2335168 49 -   7040546 ---G--TTACCAGT--------------------G-AGCTAAA--A-TAAGGTGATAC-A-C-T-TT-CTACCTG---A---T--T---C--T---T-T---C
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  403465 49 -   1652518 ---G--TTACCAGT--------------------G-AGCTAAA--A-TAAGGTGATAC-A-C-T-TT-CTACCTG---A---T--T---C--T---T-T---C
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17799504 50 -  60362399 --AG--CTATTAGC--------------------A-ACTTAAA--A-TAAGGTGATAT-G-C-T-TCT-CATCTC---A---T--T---C--T---T-T---C
i CanFam4.chr16                                          I 2 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                      252 50 -     43241 --AG--CTATTAGC--------------------A-ACTTAAA--A-TAAGGTGATAT-G-C-T-TCT-CATCTC---A---T--T---C--T---T-T---C
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 2 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034947 50 -   9314153 --AG--CTATTAGC--------------------A-ACTTAAA--A-TAAGGTGATAT-G-C-T-TCT-CATCTC---A---T--T---C--T---T-T---C
i Canis_lupus_dingo.QKWQ01000480.1                       I 2 C 0
s Canis_lupus_familiaris.chr16                            17959423 50 -  59632846 --AG--CTATTAGC--------------------A-ACTTAAA--A-TAAGGTGATAT-G-C-T-TCT-CATCTC---A---T--T---C--T---T-T---C
i Canis_lupus_familiaris.chr16                           I 2 C 0
s Canis_lupus_orion.HG994398.1                            18500724 50 +  63665305 --AG--CTATTAGC--------------------A-ACTTAAA--A-TAAGGTGATAT-G-C-T-TCT-CATCTC---A---T--T---C--T---T-T---C
i Canis_lupus_orion.HG994398.1                           I 2 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1373 52 -     12242 G-AG--TTATTAAC--------------------A-AGTTAAA--A-TAAGGTGATGG-A-G-T-TT-CCACTTG---A---T--T---T--T---T-T--TA
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           156321 28 -    496798 G-AA--TTATTTGC--------------------A-AGTTAAG--A-TAAGGTGA------------------------------------------------
i Carlito_syrichta.NW_007259797.1                        C 0 I 18
s Carollia_perspicillata.CarPer_scaffold_92756                5442 50 -     11696 --AG--TTTTTAGC--------------------A-AGTTAAA--A-CATGGTGATAC-G-T-T-TTT-CATCTG---C---T--T---C--T---T-T---C
i Carollia_perspicillata.CarPer_scaffold_92756           I 1 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137406 53 +    179628 G-AG--TTATGAGC--------------------A-AATTAAA--G-TAAAGCAATAT-G-C-T-TTT-CACTTG---A---T--T---TTTT---T-T---C
i Castor_canadensis.CasCan_scaffold_2074                 I 2 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     93399 49 +    217609 ---G--TTATTAGT--------------------A-AGTTAAA--A-TAAAGTGATAT-G-T-T-TTT-CACCTG---A---T--T---C--T---T-T---C
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                         10425 51 -     11392 G-AG--TTATTAGC--------------------A-AGTTAAA--C-CAAGGCGATAGGC-T-T-TT--CATCTG---A---T--T---T--T---C-T---G
i Cebuella_niveiventris.k141_1251222                     I 1 C 0
s Cebuella_pygmaea.k141_1309012                               6493 50 -      7577 G-AG--TTATTAGC--------------------A-AGTTAAA--C-CAAGGCGATAGGC-T-T-T---CATCTG---A---T--T---T--T---C-T---G
i Cebuella_pygmaea.k141_1309012                          I 1 C 0
s Cebus_albifrons.Contig27                                25653157 51 +  26074798 G-AG--TTATTAGC--------------------A-AGTTAAA--C-GAAGGCGACAGAC-T-T-TT--CATCTG---A---T--T---C--T---C-T---G
i Cebus_albifrons.Contig27                               I 1 C 0
s Cebus_olivaceus.k141_1764483                                1095 51 +     28840 G-AG--TTATTAGC--------------------A-AGTTAAA--C-GAAGGCGACAGAC-T-T-TT--CATCTG---A---T--T---C--T---C-T---G
i Cebus_olivaceus.k141_1764483                           I 1 C 0
s Cebus_unicolor.k141_1837183                                  820 51 +     14051 G-AG--TTATTAGC--------------------A-AGTTAAA--C-GAAGGCGACAGAC-T-T-TT--CATCTG---A---T--T---C--T---C-T---G
i Cebus_unicolor.k141_1837183                            I 1 C 0
s Cephalopachus_bancanus.k141_1423433                         5819 28 +     31688 G-AA--TTATTTGC--------------------A-AGTTAAG--A-TAAGGTGA------------------------------------------------
i Cephalopachus_bancanus.k141_1423433                    C 0 I 18
s Ceratotherium_simum.JH767749.1                          12231789 47 +  27778364 --AG--TTA---GT--------------------G-AATTAAA--A-TAAGATGATAG-G-C-T-ATT-TACCTG---A---T--T---C--C---T-C---C
i Ceratotherium_simum.JH767749.1                         I 1 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2816 47 -     25243 --AG--TTA---GT--------------------G-AATTAAA--A-TAAGATGATAG-G-C-T-ATT-TACCTG---A---T--T---C--C---T-C---C
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 1 C 0
s Cercocebus_atys.KQ010504.1                               4476014 50 +   4669795 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                         518 50 +     17872 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           1175 50 -     14043 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9208 50 +     27781 G-AG--GTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         9374 50 -     20310 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGCGATGG-C-T-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          12354 50 +     29689 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGCGATGG-C-T-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7105 50 -     20078 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-T-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          15022 50 -     27936 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-T-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            3892 50 -     17152 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGGCGG-C-T-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38817433 50 +  39242232 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-T-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223123 50 -  21565898 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-T-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40241 50 -     53127 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-T-T-TT--CACTTG---A---T--T---C--T---C-T---G
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                         492 50 +     13442 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-T-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15041 50 -     27947 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-T-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         15017 50 +     17596 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGGCGG-C-T-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          1064 50 +     14005 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-T-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             859 52 -      8501 --AG--TTACTGGC--------------------A-AGTTACA--A-TAAGGAGGTAG-A-C-T-GCT-CACCTG---A---C--C---CTTT---T-A---C
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       I 1 C 0
s Cheirogaleus_major.k141_333249                             21393 51 -     52598 G-AG--TTATTAGC--------------------A-AGTTAAA--A-TAAGGTGATAG-G-CTT-TT--CATCTG---A---T--C---C--T---C-T---C
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16758 51 +     57038 G-AG--TTATTAGC--------------------A-AGTTAAA--A-TAAGGTGATAG-G-CTT-TT--CATCTG---A---T--C---C--T---C-T---C
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1253137 54 +   2543920 G-AG--TTATTAGC--------------------A-AGTTAAA--A-TAAGGAGATGC-A-G-t-tt-ccactta---a---t--t---t--t---t-tttcc
i Chinchilla_lanigera.JH722012.1                         I 2 C 0
s Chiropotes_albinasus.k141_2206961                            691 51 -     15524 G-AG--TTATTAGC--------------------A-AGTTAAA--C-GAAGGCGAAAGGC-T-T-TT--CATCTC---A---T--T---C--T---C-T---G
i Chiropotes_albinasus.k141_2206961                      I 2 C 0
s Chlorocebus_aethiops.ctg25                              18429001 50 -  18827391 G-AG--TTGTTAAC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-T-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15438 50 -     50209 G-AG--TTGTTAAC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-T-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422438 50 + 135778131 G-AG--TTGTTAAC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-T-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 18635 54 +     19366 AGAG--TTTTTGGC--------------------A-AGTTTCA--A-TAAGGTGGTAG-A-C-A-GTT-CTCCTG---A---T--C---ATTT---T-T---C
i Choloepus_didactylus.ChoDid_scaffold_45914             I 1 C 0
s Choloepus_hoffmanni.KN194906.1                            173712 54 +    839153 AGAG--TTTTTGGC--------------------A-AGTTTCA--A-TAAGGTGGTAG-A-C-A-GTT-CTCCTG---A---T--C---ATTT---T-T---C
i Choloepus_hoffmanni.KN194906.1                         I 1 C 0
s Colobus_angolensis.KN981557.1                            1910951 50 +   2368649 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-T-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949203 50 + 200372422 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-T-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37485 50 +     84244 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-T-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17548406 49 -  53390261 --AG--GTATTAGC--------------------A-AGTGAA---A-CTAGGTGATAT-G-C-G-TTT-TACCCA---T---G--T---C--T---T-T---C
i Condylura_cristata.JH655891.1                          I 1 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14739 50 -     20389 --AG-TT-ATTAGC--------------------A-AGTTAAA--A-TAAGGTGATAT-G-C-T-TTT-CTCCTG---A---T--T---C--T---T-T---C
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 1 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 50518 28 +     63868 ------------------------------------AGTTAAA--G-TAACATGGTAT-C-T-T-TTT-CAC-------------------------------
i Cricetomys_gambianus.CriGam_scaffold_18520             I 1 C 0
s Cricetulus_griseus.LT883664.1                           11667871 54 + 224834208 G-AG--TTATTAGC--------------------A-AGTTAAA--G-CAACATGATAT-G-C-T-TT-tcacttgat-t---t--t--ct--t---t-t---c
i Cricetulus_griseus.LT883664.1                          I 2 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               3319 42 -     19598 --AG--TTATTAGG--------------------A-AGTTAAA--AATAAGGTGATTG-A-C-T-TTT-CATTT-----------------------------
i Crocidura_indochinensis.CroInd_scaffold_37019          I 2 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28826 50 -     87169 --AG--TTATTTCC--------------------A-AGTTAAA--A-TAAGGTGATAG-G-C-T-TCT-CACCTG---A---T--T---C--T---T-C---C
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 2 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837411 51 +   1526836 G-AG--CTATTAGC--------------------A-AATTCAA--G-TAAGATGATAT-G-C-T-TCT-CGGTTG---A---A--T---T--T---T-T---C
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 4 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  36258 55 +     51376 G-AA--TTATTAAC--------------------A-AGTTAAA--A-TAAGAGGATGG-A-G-T-TT-CCAGTTG---A---TGTT---T--T---T-T-TTC
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            63875 54 +   2246927 AGAG--TTAGTGGC--------------------A-AATTACA--A-GAAGGTGGTAG-A-C-G-GTT-CACCTG---A---t--c---cttt---t-t---c
i Dasypus_novemcinctus.JH564415.1                        I 1 C 0
s Daubentonia_madagascariensis.ctg71                      12537616 50 -  12879189 G-AG--TTATTAGC--------------------A-AGTTAAA--A-CAAGGTGATAG-G-C-T-TT--CATCTG---A---T--T---C--T---C-T---C
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630459 50 +  20541912 --AG--TTGTTAGC--------------------A-AGTTAAA--A-CATGGTGATAT-G-T-T-TTT-CAtctg---c---t--t---c--t---t-t---c
i Desmodus_rotundus.KZ672289.1                           I 1 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673638 47 +   1390856 --AG--TTA---GT--------------------G-AGTTAAA--A-TAAGATGATAG-G-C-T-ATT-TACCTG---A---T--T---T--C---T-C---C
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 2 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6389 47 +    198055 --AG--TTA---GT--------------------G-AATTAAA--A-TAAGATGATAG-G-C-T-ATT-TACCTG---A---T--T---C--C---T-C---C
i Diceros_bicornis.DicBicMic_scaffold_5955               I 3 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36723 52 +     67921 G-AG--TTATTAGC--------------------A-AGTTAAA--A-TAAGGTGATGT-A-G-T-TT-CCACTTG---A---T--T---T--T---T-T--TC
i Dinomys_branickii.DinBra_scaffold_21862                I 2 C 0
s Echinops_telfairi.JH980293.1                            48780925 53 + 111700974 a-ag--ttacaaGC--------------------A-GCTTACA--G-TAAGGTGATAT-ACT-T-T-T-TACCtg---a---t--c---attt---t-t---c
i Echinops_telfairi.JH980293.1                           I 1 I 44
s Eidolon_helvum.KE759718.1                                  10864 50 +     11740 --AG--TTATTAGC--------------------G-AGTTAAA--A-TAAGGTGATAT-G-C-T-TTT-CATCCG---A---T--T---C--T---T-T---C
i Eidolon_helvum.KE759718.1                              I 1 C 0
s Elephantulus_edwardii.JH947257.1                         1097987 53 +  10337057 A-AG--TTGTCGGC--------------------A-AGTTGCA--G-TACAGTGATAT-G-C-T-TTT-TACCTA---A---T--C---CTCT---T-C---C
i Elephantulus_edwardii.JH947257.1                       I 3 C 0
s Ellobius_lutescens.LOEQ01008920.1                          20595 43 -    110024 G-GG--TTATTAGC--------------------A-AGCTAAA--G-TAACATGATGC-A-c-t-tt-tcacttg----------------------------
i Ellobius_lutescens.LOEQ01008920.1                      I 2 I 9
s Ellobius_talpinus.LOJH01081419.1                             726 52 +      8657 ---G--TTATTAGC--------------------A-AGCTAAA--G-TAACATGATAC-A-C-t-tt-tcacttgat-t---t--t--tt--t---t-c---c
i Ellobius_talpinus.LOJH01081419.1                       I 2 C 0
s Enhydra_lutris.KZ291758.1                               16329643 50 -  41312741 --AG--TTATTAGC--------------------A-AGTTAAA--A-TAAGGTGATGT-G-C-T-TCT-CAcctg---a---t--t---c--t---t-t---c
i Enhydra_lutris.KZ291758.1                              I 2 C 0
s Eptesicus_fuscus.JH977646.1                              2146066 50 -  14770903 --AG--TCATTAGC--------------------A-AGTTAAA--A-TATAGTGCTAT-G-C-T-TTT-CACCTG---A---C--T---C--T---C-T---C
i Eptesicus_fuscus.JH977646.1                            I 1 C 0
s Equus_asinus.JREZ01000139.1                              1283894 50 +   4378816 --AG--TTATTAGT--------------------G-AGTTAAA--A-TAAGATGATAC-A-C-T-ATT-CACCTG---A---T--T---C--C---T-C---C
i Equus_asinus.JREZ01000139.1                            I 1 C 0
s Equus_caballus.CM000403.2                               18531714 50 -  39960074 --AG--TTATTAGT--------------------G-AGTTAAA--A-TAAGACGATAC-A-C-T-ATT-CACCTG---A---T--T---C--C---T-C---C
i Equus_caballus.CM000403.2                              I 1 C 0
s Equus_przewalskii.KK951119.1                               33743 50 +    498745 --AG--TTATTAGT--------------------G-AGTTAAA--A-TAAGACGATAC-A-C-T-ATT-CACCTG---A---T--T---C--C---T-C---C
i Equus_przewalskii.KK951119.1                           I 1 C 0
s Erinaceus_europaeus.JH835339.1                           3328540 28 -   7059049 --aa--t---caac--------------------a-aattaa-aaa-tgaagttt-aT-G-------------------------------------------
i Erinaceus_europaeus.JH835339.1                         I 1 I 18
s Erythrocebus_patas.Contig38                             21205606 50 -  21539334 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-T-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_576796                              40438 51 -     44621 G-AG--TTATTAGC--------------------A-AGTTAAA--A-TAAGATGATAG-G-CTT-TT--CATCTG---A---T--C---C--T---C-T---C
i Eulemur_albifrons.k141_576796                          I 32 C 0
s Eulemur_collaris.k141_377015                                6819 51 -     16928 G-AG--TTATTAGC--------------------A-AGTTAAA--A-TAAGATGATAG-G-CTT-TT--CATCTG---A---T--C---C--T---C-T---C
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15851 51 -     25546 G-AG--TTATTAGC--------------------A-AGTTAAA--A-TAAGATGATAG-G-CTT-TT--CATCTG---A---T--C---C--T---C-T---C
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            13047 51 +     26330 G-AG--TTATTAGC--------------------A-AGTTAAA--A-TAAGATGATAG-G-CTT-TT--CATCTG---A---T--C---C--T---C-T---C
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14282 51 +     23973 G-AG--TTATTAGC--------------------A-AGTTAAA--A-TAAGATGATAG-G-CTT-TT--CATCTG---A---T--C---C--T---C-T---C
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                13044 51 +     75513 G-AG--TTATTAGC--------------------A-AGTTAAA--A-TAAGATGATAG-G-CTT-TT--CATCTG---A---T--C---C--T---C-T---C
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 10974 51 +     97555 G-AG--TTATTAGC--------------------A-AGTTAAA--A-TAAGATGATAG-G-CTT-TT--CATCTG---A---T--C---C--T---C-T---C
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              465 51 +     13026 G-AG--TTATTAGC--------------------A-AGTTAAA--A-TAAGATGATAG-G-CTT-TT--CATCTG---A---T--C---C--T---C-T---C
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4518 51 -     17153 G-AG--TTATTAGC--------------------A-AGTTAAA--A-TAAGATGATAG-G-CTT-TT--CATCTG---A---T--C---C--T---C-T---C
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              14091 51 +    111500 G-AG--TTATTAGC--------------------A-AGTTAAA--A-TAAGATGATAG-G-CTT-TT--CATCTG---A---T--C---C--T---C-T---C
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237282 50 + 206538554 --AC--TTATTTCC--------------------A-CGTTAAA--G-TAAGGTGATAG-G-C-T-TCT-CACCTG---A---T--T---C--T---T-T---C
i Felis_catus.CM001381.2                                 I 2 C 0
s Felis_catus_fca126.CM031415.1                           20196125 50 + 205367284 --AC--TTATTTCC--------------------A-CGTTAAA--G-TAAGGTGATAG-G-C-T-TCT-CACCTG---A---T--T---C--T---T-T---C
i Felis_catus_fca126.CM031415.1                          I 2 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  9878 50 -     36744 --AC--TTATTTCC--------------------A-CGTTAAA--G-TAAGGTGATAG-G-C-T-TCT-CACCTG---A---T--T---C--T---T-T---C
i Felis_nigripes.FelNig_flattened_line_20823             I 2 C 0
s Fukomys_damarensis.KN121974.1                             850765 51 +   3816255 G-AG--TTATTGTC--------------------A-GG-TGAA--A-TAAGGTAATAT-A-g-t-tt-tcacttaattt---t--c---t--t---t------
i Fukomys_damarensis.KN121974.1                          I 2 I 1
s Galago_moholi.ctg2040                                     426937 51 -    453645 G-AA--TTTTTAGC--------------------A-AGTTAAA--A-TAAGGTGATGG-G-C-TATT--CATCTG---A---T--T---C--T---C-T---C
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4627 51 +     11339 G-AA--TTTTTAGC--------------------A-AGTTAAA--A-TAAGGTGATGG-G-C-TATT--CATCTG---A---T--T---C--T---C-T---C
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            1925 51 +     41679 G-AA--TTTTTAGC--------------------A-AGTTAAA--A-TAAGGTGATGG-G-C-TATT--CATCTG---A---T--T---C--T---C-T---C
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1524 51 -      9135 G-AG--TTATTGGC--------------------C-GGTTAAA--A-TAAGGCAATAT-G-C-T-TTT-TCCCTG---A---T--T---C--C---T-T---G
i Galeopterus_variegatus.GalVar_scaffold_108840          I 2 C 0
s Glis_glis.GliGli_scaffold_19807                            31683 52 +     49224 G-AG--TTATTAGC--------------------A-AGCTAAA--G-TAAGGTGATAT-G-C-T-TTT-CACTTG---A---T--T---C--T--TT-T---T
i Glis_glis.GliGli_scaffold_19807                        I 2 C 0
s Gorilla_beringei.k141_3596273                              16410 50 -     32273 G-AG--TTGTTAAC--------------------A-AGTTAAA--A-GAAGATGATAG-C-T-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.CYUI03001204.1                             14006 50 -     63219 G-AG--TTATTAAC--------------------A-AGTTAAA--A-GAAGGTGATAG-C-T-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Gorilla_gorilla.CYUI03001204.1                         I 294 I 581
s Graphiurus_murinus.GraMur_scaffold_10447                   32935 52 +     78134 G-AG--TTATTAGC--------------------A-AGCTAAA--G-TAAAGTGCTAT-G-C-T-TTT-CACTTG---A---T--T---C--T--TT-T---T
i Graphiurus_murinus.GraMur_scaffold_10447               I 2 C 0
s Hapalemur_alaotrensis.k141_170648                           7150 51 -     19426 G-AC--TTATTAGC--------------------A-AGTTAAA--A-TAAGATGATAG-G-CTT-TT--CATCTG---A---T--C---C--T---C-T---C
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12299 51 -     15286 G-AC--TTATTAGC--------------------A-AGTTAAA--A-TAAGATGATAG-G-CTT-TT--CATCTG---A---T--C---C--T---C-T---C
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13938 51 +     18253 G-AC--TTATTAGC--------------------A-AGTTAAA--A-TAAGATGATAG-G-CTT-TT--CATCTG---A---T--C---C--T---C-T---C
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         14039 51 -     41752 G-AC--TTATTAGC--------------------A-AGTTAAA--A-TAAGATGATAG-G-CTT-TT--CATCTG---A---T--C---C--T---C-T---C
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13876 51 -     16460 G-AC--TTATTAGC--------------------A-AGTTAAA--A-TAAGATGATAG-G-CTT-TT--CATCTG---A---T--C---C--T---C-T---C
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242660 50 +    327341 --AG--TTATTTCC--------------------A-AGTTAAA--A-TCAGGTGATAG-G-C-T-TCT-CACCTG---A---T--T---C--T---T-T---C
i Helogale_parvula.HelPar_flattened_line_2585            I 2 C 0
s Heterocephalus_glaber.JH602082.1                        20662530 44 +  22651954 G-AG--TTATTAGC--------------------A-AGTTAAA--A-TAAGGTGTTAT-G-G-T-TTT-CCCTTA---T------------------------
i Heterocephalus_glaber.JH602082.1                       I 2 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1221 54 +      7595 A-AGAGTTA-TAGC--------------------A-GGTTACA--G-TAAGGTGATAA-G-C-T-TTT-CACCAG---A---T--C---CCCT---T-T---C
i Heterohyrax_brucei.HetBruBak_scaffold_122365           I 1 C 0
s Hoolock_leuconedys.ctg274                                    435210 50 +    630532 G-AG--TTGTTAAC--------------------A-AGTTAAA--A-GAAGGTGATAG-C-T-T-TT--CACCTC---A---T--T---C--T---C-T---G
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45354 48 +     55795 --AG--TTATTTCC--------------------A-AGTTAAA--A-TAAAGCGATAG-G-C-T-TCT-CACCTG---A---T--T---C--T---T------
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 2 I 1
s Hystrix_cristata.HysCri_scaffold_5660                      83425 51 +    135385 G-CA--TTATTAGC--------------------A-AGTTAAA--A-TAAAGTGATAC-A-G-T-TTT-CACTTG---T---C--T---T--T---T-T---C
i Hystrix_cristata.HysCri_scaffold_5660                  I 1 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7521214 53 -   7955117 G-AC--TTATTAGC--------------------A-AGTTAAA--G-TAAGGCGATAt-g-c-t-tt-tcacttt---a---t--t---t--ttt-t-t---t
i Ictidomys_tridecemlineatus.JH393364.1                  I 1 C 0
s Indri_indri.k141_3655594                                   22836 51 +     31101 G-AG--TTATTAGC--------------------A-AGTTAAA--A-TAAGATGATAA-G-CTT-TT--CATCTG---A---T--C---C--T---C-T---C
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8277122 52 -   9596543 G-AG--TTATTAGC--------------------A-AGTTAAA--G-TAAGATGATAT-G-C-T-TTT-CACTTG---A---T-AT---T--T---T-T---T
i Jaculus_jaculus.JH725527.1                             I 2 C 0
s Lasiurus_borealis.LasBor_scaffold_50988                    15498 50 +     29960 --AG--TTATTAGC--------------------A-AGTTAAA--A-TAGAGTGCTCT-G-C-T-ATT-CACCCG---A---T--T---C--T---C-T---C
i Lasiurus_borealis.LasBor_scaffold_50988                I 3019 I 17
s Lemur_catta.scaffold_24                                 15524391 51 -  30322482 G-AC--TTATTAGC--------------------A-AGTTAAA--A-TAAGATGATAG-G-CTT-TT--CATCTG---A---T--C---C--T---C-T---C
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        8069 51 +     64341 G-AG--TTATTAGC--------------------A-AGTTAAA--T-GAAGGCGATAGGC-T-T-TT--CATCTC---A---T--T---C--T---C-T---G
i Leontocebus_fuscicollis.k141_1820339                   I 1 C 0
s Leontocebus_illigeri.k141_1304848                            409 51 -     35062 G-AG--TTATTAGC--------------------A-AGTTAAA--C-GAAGGCGATAGGC-T-T-TT--CATCTC---A---T--T---C--T---C-T---G
i Leontocebus_illigeri.k141_1304848                      I 1 C 0
s Leontocebus_nigricollis.k141_4610752                        8097 51 +     35603 G-AG--TTATTAGC--------------------A-AGTTAAA--C-GAAGGCGATAGGC-T-T-TT--CATCTC---A---T--T---C--T---C-T---G
i Leontocebus_nigricollis.k141_4610752                   I 1 C 0
s Leontopithecus_chrysomelas.k141_1519602                    29512 50 +     38576 --AG--TTATTAGC--------------------A-AGTTAAA--C-GAAGGCGACAGAC-T-T-TT--CATCTC---A---T--T---C--T---C-T---G
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         26212 50 +     66356 --AG--TTATTAGC--------------------A-AGTTAAA--C-GAAGGCGACAGAC-T-T-TT--CATCTC---A---T--T---C--T---C-T---G
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         11283 51 -     23766 G-AG--TTATTAGC--------------------A-AGTTAAA--A-TAAGGTGATAG-G-CTT-TT--CATCTG---A---T--C---C--T---C-T---C
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29344 51 +     45836 G-AG--TTATTAGC--------------------A-AGTTAAA--A-TAAGGTGATAG-G-CTT-TT--CATCTG---A---T--C---C--T---C-T---C
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1882 51 +     25010 G-AG--TTATTAGC--------------------A-AGTTAAA--A-TAAGGTGATAG-G-CTT-TT--CATCTG---A---T--C---C--T---C-T---C
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27280 51 +     54090 G-AG--TTATTAGC--------------------A-AGTTAAA--A-TAAGGTGATAG-G-CTT-TT--CATCTG---A---T--C---C--T---C-T---C
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3043386 50 +   3914936 --AT--TTATTAGC--------------------A-AGTTAAA--A-TAAGGTGATGT-A-C-T-TCT-CACCTG---A---T--A---C--T---T-C---C
i Leptonychotes_weddellii.KB714746.1                     I 2 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6810 32 -     14121 G-AG--TTCTTAGC--------------------A-AGTTAAA--A-TTAGGTAATAT-A-------------------------------------------
i Lepus_americanus.LepAme_scaffold_107385                I 2 I 18
s Lophocebus_aterrimus.ctg367                              1437559 50 +   1826925 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            6185 51 +     11245 G-AA--TTTTCAGC--------------------A-CGTTAAA--A-TAAGGTGATGG-A-C-TATT--CATCTG---A---T--T---C--T---C-T---C
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1005006 51 +   6120653 G-AA--TTTTCAGC--------------------A-CGTTAAA--A-TAAGGTGATGG-A-C-TATT--CATCTG---A---T--T---C--T---C-T---C
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4217652 55 -  43346337 a-agaattattaGC--------------------G-AGTTACA--G-GAAGGTGATGC-G-C-T-TTT-CACCTG---A---T--C---CCCT---T-T---C
i Loxodonta_africana.GL010049.1                          I 1 C 0
s Lycaon_pictus.CM007581.1                                17955663 50 -  59628241 --AG--CTATTAGC--------------------A-ACTTAAA--A-TAAGGTGATAT-G-C-T-TCT-CAtctc---a---t--t---c--t---t-t---c
i Lycaon_pictus.CM007581.1                               I 2 C 0
s Macaca_arctoides.k141_2326796                               7372 50 +     40492 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGATGATGG-C-T-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59676631 50 +  60120075 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-T-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13147 50 -     26193 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGATGATGG-C-T-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            80931 50 -    114318 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGATGATGG-C-T-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  6618 50 -     23192 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGATGATGG-C-T-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16091 50 -     29190 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGATGATGG-C-T-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  24656 50 +     37952 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGATGATGG-C-T-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186839745 50 + 187317192 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGATGATGG-C-T-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458308 50 -  25927173 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGATGATGG-C-T-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  80504 50 +     89720 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGATGATGG-C-T-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 7505 50 +     20474 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGATGATGG-C-T-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   7305 50 -     14993 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGATGATGG-C-T-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  330171 50 -    668171 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGATGATGG-C-T-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 5618 50 -     24072 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGATGATGG-C-T-T-TT--CACCTG---C---T--T---C--T---C-T---G
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26243 50 -     45290 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGATGATGG-C-T-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 90956 49 +     94391 --AA---TAGTAGC--------------------A-AGTTAAA--A-TAAGGTGATAT-G-C-T-TTT-CATCTG---A---T--T---C--T---T-T---C
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 1 C 0
s Mandrillus_leucophaeus.scaffold280                      23937834 50 -  24302211 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               351958 50 +    752769 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              18847 50 +    737560 --AG--TTACTAGC--------------------A-AGTTAAA--A-TAAGGTCATAT-G-C-T-TTT-CCCCTG---A---T--T---C--T---G-T---C
i Manis_javanica.JSZB01003497.1                          I 1 C 0
s Manis_pentadactyla.KN006162.1                              50833 50 -    317179 --AG--TTACTAGc--------------------a-agttaaa--a-taaggtcatat-G-C-T-TTT-CCCCTG---A---T--T---C--T---T-T---C
i Manis_pentadactyla.KN006162.1                          I 1 C 0
s Marmota_marmota.CZRN01000018.1                          33103413 52 -  40650429 G-AC--TTATTAGC--------------------A-AGTTAAA--G-TAAGGCGATAt-g-c-t-tt-tcacttt---a---t--t---t--tt--t-t---t
i Marmota_marmota.CZRN01000018.1                         I 1 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        10776 49 -    207569 --AG-TT-ATTAGC--------------------A-AGTTAAA--A-TA-GGTGATAG-G-C-T-TTT-CATCTG---A---T--T---A--T---T-T---C
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10378 50 +     13704 --AG--TTATTAGC--------------------A-AATTAAA--A-TAAGGTGATGT-G-C-T-TCT-CATCTG---A---T--T---C--T---T-T---C
i Mellivora_capensis.MelCap_flattened_line_69365         I 2 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 33059 49 +    140813 G-AG--TTATTAGC--------------------A-AGTTAAA--G-TAACATGATAT-G-T-T-TTT-GATTTA---T---T--T---T--T---T------
i Meriones_unguiculatus.MerUng_scaffold_7390             I 2 I 1
s Mesocricetus_auratus.KB708134.1                         12182546 48 -  29670104 G-AG--TTATTAGC--------------------A-AGTTAAA--G-TAACATGATAG-G-C-T-TTT-Cacttga-at---t--t-----------------
i Mesocricetus_auratus.KB708134.1                        I 2 I 4
s Mico_argentatus.k141_1239457                                6304 51 -      7380 G-AG--TTATTAGC--------------------A-AGTTAAA--C-CAAGGCGATAGGC-T-T-TT--CATCTG---A---T--T---T--T---C-T---G
i Mico_argentatus.k141_1239457                           I 1 C 0
s Mico_humeralifer.k141_2457295                                533 51 +      1079 G-AG--TTATTAGC--------------------A-AGTTAAA--C-CAAGGCGATAGGC-T-T-TT--CATCTG---A---T--T---T--T---C-T---G
i Mico_humeralifer.k141_2457295                          I 1 C 0
s Mico_schneideri.k141_1950671                                      6316 51 -      7356 G-AG--TTATTAGC--------------------A-AGTTAAA--C-CAAGGCGATAGGC-T-T-TT--CATCTG---A---T--T---T--T---C-T---G
i Mico_schneideri.k141_1950671                                 I 1 C 0
s Microcebus_murinus.CM007674.1                           18291817 51 -  93316391 G-AG--TTATTAGC--------------------A-AGTTAAA--A-TAAGGTGATAG-G-CTT-TT--CATCTG---A---T--C---C--T---C-T---C
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    22676 52 -    145209 A-AG--TTACCAGC--------------------A-ACTTAGA--G-TAATGTGATAT-A-T-T-T-T-TACCTG---A---T--C---CTTT---T-T---C
i Microgale_talazaci.MicTal_scaffold_6613                I 1 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                15984 48 -     19307 --A----TTTTAGC--------------------A-AGTTAAA--A-CATGGTGATAT-G-T-T-TTT-CATCTG---C---T--T---C--T---T-T---C
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 1 C 0
s Microtus_ochrogaster.CM001695.1                         11260774 54 -  27267610 G-AG--TTATTAGC--------------------A-AGCTCAA--G-TAACATGATAT-A-C-T-TTT-CACTTG-ATT---T--TT--T--T---G-T---C
i Microtus_ochrogaster.CM001695.1                        I 2 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850938 50 +   8254450 --AG--TTATTAGC--------------------A-AGTTGAA--A-TACTGTGCCAT-G-C-T-TTT-CACCTG---A---A--T---C--T---T-T---C
i Miniopterus_natalensis.LDJU01000034.1                  I 1 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34619 50 +     64694 --AG--TTATTAGC--------------------A-AGTTAAA--A-TATGGTGCCAT-G-C-T-TTT-CACCTG---A---A--T---C--T---T-T---C
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 1 C 0
s Miopithecus_ogouensis.k141_534055                           9540 50 -     28506 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-T-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6254 50 -      8324 --AT--TTATTAGC--------------------A-AGTTAAA--A-TAAGGTGATGT-A-C-T-TCT-CACCTG---A---T--A---C--T---T-C---C
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 2 C 0
s Mirza_zaza.k141_952172                                      9361 51 -     37649 G-AG--TTATTAGC--------------------A-AGTTAAA--A-TAAGGTGATAG-G-CTT-TT--CATCTG---A---T--C---C--T---C-T---C
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 141962 50 -    366855 --AG--TTATTAGC--------------------A-AGTTAAA--A-CACGGGAATAT-G-C-T-TTT-CACCTG---C---T--T---C--T---T-G---C
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 1 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35760 50 +     37127 --AG--TTATTTCC--------------------A-AGTTAAA--A-AAAGGTGATAG-G-C-T-TCT-CACCTG---A---T--T---C--T---T-T---C
i Mungos_mungo.MunMun_flattened_line_23663               I 2 C 0
s Murina_feae.MurFea_scaffold_85699                           7161 50 +     14753 --AG--GTATTAGC--------------------A-AGTTAAA--A-TACAGTGTTCT-G-C-T-TTT-CACCTG---A---T--T---C--T---C-T---C
i Murina_feae.MurFea_scaffold_85699                      I 1 C 0
s Mus_caroli.LT608237.1                                   84361666 48 - 120012414 G-AA--TTATTAGC--------------------A-AGTTAAA--G-TA-----ATAT-G-C-t-tt-tcactta---t---tatt---t--t---t-t---c
i Mus_caroli.LT608237.1                                  I 2 C 0
s Mus_musculus.chr8                                       87650665 46 - 129401213 G-AG--TTATTAGC--------------------A-AGTTAAA--G-TA-----ATAT-g-c-t-tt-tcactta---t---t--t---t--t---t-t---c
i Mus_musculus.chr8                                      I 2 C 0
s Mus_pahari.LT608297.1                                   31355324 43 -  89631738 G-AG--TTATTAGC--------------------A-AGTTAAA--G-ta-----atat-a-t-t-tt-ttactta---t---t--t---t--t----------
i Mus_pahari.LT608297.1                                  I 2 I 2
s Mus_spretus.CM004101.1                                  90752726 46 - 130317789 G-AG--TTATTAGC--------------------A-AGTTAAA--G-TA-----ATAT-g-c-t-tt-tcactta---t---t--t---t--t---t-t---c
i Mus_spretus.CM004101.1                                 I 2 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              5261 52 +     14296 G-AG--TTATTTGC--------------------A-AGCTAAA--G-TAAGGTGATAT-G-C-T-TTT-CACCTG---A---T--T---C--T--TT-T---T
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 2 C 0
s Mustela_putorius.JH418006.1                               301791 51 -  14710649 --AGA-TTATTAGC--------------------A-AGTTAAA--A-TAAGGTGATGT-G-C-T-TCT-CACctg---a---t--t---c--t---t-t---c
i Mustela_putorius.JH418006.1                            I 12 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71573 53 -     80779 G-AG--CTATTAAC--------------------A-AGTTAAA--A-TAAGGTGATGG-A-G-T-TT-CCACTTG---A---T--T---T--T---T-T-TTC
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                280805 50 -  10118263 --AG--TTATTAGC--------------------A-AGTTAAA--A-TATAGTGCTAT-G-C-T-TTT-CACCCA---A---T--T---C--T---C-T---C
i Myotis_brandtii.KE162005.1                             I 1 C 0
s Myotis_davidii.KB100139.1                                1588061 50 -   6019432 --AG--TTATTAGA--------------------A-AGTTAAA--A-TATAGTACTGT-G-C-T-TTT-CACCTG---A---T--T---C--T---C-T---C
i Myotis_davidii.KB100139.1                              I 1 C 0
s Myotis_lucifugus.GL429869.1                              3904159 50 -   4330536 --AG--TTATTAGC--------------------A-AGTTAAA--A-TATAGTGCTAT-G-C-T-TTT-CACCCG---A---T--T---C--T---C-T---C
i Myotis_lucifugus.GL429869.1                            I 1 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                         308 50 +      1835 --AG--TTATTAGC--------------------A-AGTTAAA--A-TATAGTGCTAT-G-C-T-TTT-CACCTG---A---T--T---C--T---C-T---C
i Myotis_myotis.MyoMyo_scaffold_281845                   I 1 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189586 54 +    196477 AGAG--TTATTGGC--------------------A-AGTTACA--A-CAAGGTGGTAG-A-C-T-CTT-CCCTCG---A---T--G---ATTT---T-C---C
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 1 C 0
s Nannospalax_galili.KL204047.1                            2034390 54 -   3037898 G-AA--TTATTAGC--------------------A-AGGTAAA--G-TAAGATGGTAT-G-C-T-TTT-TGCTTG---AAATT--G---T--T---T-T---C
i Nannospalax_galili.KL204047.1                          I 2 C 0
s Nasalis_larvatus.k141_413338                               15542 50 +     21681 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20307840 50 +  31847680 --AT--TTATTAGC--------------------A-AGTTAAA--A-TAAGGTGATGT-A-C-T-TCT-CACCTG---A---T--A---C--T---T-C---C
i Neomonachus_schauinslandi.NINY01007730.1               I 2 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    758213 52 +    783361 --AG--TTATTAGC--------------------AAAGTTAAA--A-TACAGTGATAG-G-C-T-TTTTTGCCTG---C---T--T---C--T---T-T---C
i Noctilio_leporinus.NocLep_scaffold_251                 I 1 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149731 50 -   9404916 --AG--CTATTAGC--------------------A-ACTTAAA--A-TAAGATGATAT-G-C-T-TCT-catctc---a---t--t---c--t---t-t---c
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 2 C 0
s Nycticebus_bengalensis.LG01                            102586550 51 - 196305487 G-AA--TTTTTAGC--------------------A-CATTAAA--A-TAAGGTGATGG-G-C-TATT--CATCCG---A---T--T---C--T---C-C---C
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              474 51 +      2075 G-AA--TTTTTAGC--------------------A-CATTAAA--A-TAAGGTGATGG-G-C-TATT--CATCCG---A---T--T---C--T---C-C---C
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761905 51 + 199412804 G-AA--TTTTTAGC--------------------A-CATTAAA--A-TAAGGTGATGG-G-C-TATT--CATCTG---A---T--T---C--T---C-C---C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1363868 32 +   3988456 G-AG--TTCTTAGT--------------------G-AGTTAAA--A-TAAGGTAATAT-A-------------------------------------------
i Ochotona_princeps.JH802162.1                           I 2 I 18
s Octodon_degus.JH651603.1                                  747181 53 +  11899542 G-AG--TTATTAAC--------------------A-AGCTAAA--A-TAAGGTGATGG-A-G-T-Tt-ccacttg---a---t--t---t--t---t-tt-cc
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                              506985 50 -   2017862 --AG--TTATTAGC--------------------A-AGTTAAA--A-TAAGGTGATGT-A-C-T-TCT-CACCTG---A---T--T---C--T---T-C---C
i Odobenus_rosmarus.KB229312.1                           I 2 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   25442 54 +     28053 G-AG--TTATTAGC--------------------A-AGCTAAA--G-TAACATGATAC-A-C-T-TTT-CACTTG-ATT---T--TT--T--T---T-T---C
i Ondatra_zibethicus.OndZib_scaffold_46174               I 2 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    80451 53 +    102263 G-AG--TTATTAGC--------------------A-AGTTAAA--G-TAACATGATAT-G-C-T-TCT-CACTTG-ATT---T--T---T--T---T-T---C
i Onychomys_torridus.OnyTor_scaffold_2986                I 2 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387              10419 53 -     18566 A-AG--TTATTAAC--------------------A-AGTTACA--G-TAAAGTGATGT-G-C-T-TTT-CACCTG---G---T--T---CTCT---T-C---C
i Orycteropus_afer.OryAfe_flattened_line_144387          I 1 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147670 32 + 174332312 G-AG--TTCTTAGC--------------------A-AGTTAAA--A-TTAGGTAATAT-A-------------------------------------------
i Oryctolagus_cuniculus.CM000791.1                       I 2 I 18
s Otocyon_megalotis.JAEUCK010005147.1                       462679 50 -    559221 --AG--CTATTAGC--------------------A-ACTTAAA--A-TAAGGTGATAT-G-C-T-TCT-CATCTC---A---T--T---C--T---T-T---C
i Otocyon_megalotis.JAEUCK010005147.1                    I 2 C 0
s Otolemur_crassicaudatus.k141_222918                         4457 51 +      8798 G-AA--TTTTTAGC--------------------A-AGTTAAA--A-TAAGGTGATGG-G-C-TATT--CATCTG---A---T--T---C--T---C-T---C
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696620 51 -   1103335 G-AA--TTTTTAGC--------------------A-AGTTAAA--A-TAAGGTGATGG-G-C-TATT--CATCTG---A---T--T---C--T---C-T---C
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    44498 50 +     80009 G-AG--TTGTTAAC--------------------A-AGTTAAA--A-GAAGGTGATAG-C-T-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189143399 50 + 189151597 G-AG--TTGTTAAC--------------------A-AGTTAAA--A-GAAGGTGATAG-C-T-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Pan_troglodytes.CM009242.2                             I 31 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  151491 50 +    230217 --AC--TTATTTCC--------------------A-CGTTAAA--G-TAAGGTGATAG-G-C-T-TCT-CACCTG---A---T--T---C--T---T-C---C
i Panthera_onca.PanOnc_flattened_line_3271               I 2 C 0
s Panthera_pardus.KV860321.1                                264700 50 +  18783137 --AC--TTATTTCC--------------------A-CGTTAAA--G-TAAGGTGATAG-G-C-T-TCT-CACCTG---A---T--T---C--T---T-T---C
i Panthera_pardus.KV860321.1                             I 2 C 0
s Panthera_tigris.KE722367.1                               4721579 50 -   8748460 --AC--TTATTTCC--------------------A-CGTTAAA--G-TAAGGTGATAG-G-C-T-TCT-CACCTG---A---T--T---C--T---T-T---C
i Panthera_tigris.KE722367.1                             I 2 C 0
s Papio_anubis.CM001495.2                                183443636 50 + 183742232 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7282 50 +     20448 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20564094 50 +  20919399 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6026 50 +     41871 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     9319 50 +     27711 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                   316 50 -     11374 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12990 50 -     78924 --TG--TTATTTCC--------------------A-AGTTAAA--G-TAAAGTGATAG-A-C-T-TCT-CACCTG---A---T--T---C--T---T-T---C
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 2 C 0
s Perodicticus_ibeanus.k141_855320                           10433 51 +     13100 G-AA--TTTTTAGC--------------------A-AGTTAAA--A-TAAGGTGATGG-G-A-TGTT--CATCTG---A---T--T---C--T---C-T---C
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8839 51 +     25941 G-AA--TTTTTAGC--------------------A-AGTTAAA--A-TAAGGTGATGG-G-A-TGTT--CATCTG---A---T--T---C--T---C-T---C
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18195077 52 -  18517816 --AG--TTATTAGC--------------------A-AGTTAAA--G-TAACATGATAT-G-C-t-tt-tcacttgat-t---t--t---t--t---t-t---c
i Peromyscus_maniculatus.KI615324.1                      I 1 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28445 52 -     29689 G-CA--TTACTAGC--------------------A-AGTGAAA--A-TAAGATAATAT-G-G-T-TT-GCACTTC---A---T--TTTGT--T---T------
i Petromus_typicus.PetTyp_scaffold_42190                 I 2 I 1
s Piliocolobus_badius.k141_1234363                           44033 50 +     62158 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        38780 50 +     89929 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40196 50 +     51399 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296434 50 -  14605196 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2100 50 +     22620 --AG--TTATTAGC--------------------A-AGTTAAA--A-TATAGTGCTAT-G-C-T-TTT-CACCTG---A---T--T---C--C---C-T---C
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 1 C 0
s Pongo_abelii.CM009266.2                                189131537 50 + 189387572 G-CG--TTGTTAAC--------------------A-AGTTAAA--A-GAAGGTGATAG-C-T-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9571144 50 +   9816681 G-CG--TTGTTAAC--------------------A-AGTTAAA--A-GAAGGTGATAG-C-T-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               73718 50 -     81375 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              5538 50 +     19060 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 13676 54 -     22811 A-AGAATTA-TAGC--------------------A-GGTTACA--G-TAAGGTGATAA-G-C-T-TTT-CACCAG---A---T--C---CCCT---T-T---C
i Procavia_capensis.ProCapCap_scaffold_85530             I 1 C 0
s Prolemur_simus.MPIZ01000396.1                            2597071 51 -   4620579 G-AC--TTATTAGC--------------------A-AGTTAAA--A-TAAGATGATAG-G-CTT-TT--CATCTG---A---T--C---C--T---C-T---C
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     991057 51 +   2598838 G-AG--TTATTAGC--------------------A-AGTTAAA--A-TAAGATGATAG-G-CTT-TT--CATCTG---A---T--C---C--T---C-T---C
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29369 51 +     38485 G-AG--TTATTAGC--------------------A-AGTTAAA--A-TAAGATGATAG-G-CTT-TT--CATCTG---A---T--C---C--T---C-T---C
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1412 51 -     13098 G-AG--TTATTAGC--------------------A-AGTTAAA--A-TAAGATGATAG-G-CTT-TT--CATCTG---A---T--C---C--T---C-T---C
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26890 51 +     35766 G-AG--TTATTAGC--------------------A-AGTTAAA--A-TAAGATGATAG-G-CTT-TT--CATCTG---A---T--C---C--T---C-T---C
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           5077 51 -     24134 G-AG--TTATTAGC--------------------A-AGTTAAA--A-TAAGATGATAG-G-CTT-TT--CATCTG---A---T--C---C--T---C-T---C
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28902 51 -     67325 G-AG--TTATTAGC--------------------A-AGTTAAA--A-TAAGATGATAG-G-CTT-TT--CATCTG---A---T--C---C--T---C-T---C
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           5125 51 -      6182 G-AG--TTATTAGC--------------------A-AGTTAAA--A-TAAGATGATAG-G-CTT-TT--CATCTG---A---T--C---C--T---C-T---C
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            10704 51 -     21651 G-AG--TTATTAGC--------------------A-AGTTAAA--G-TAACATgatat-g-t-t-tt-tcattta---t---t--t---t--t---t-t---t
i Psammomys_obesus.NESX01036370.1                        I 2 C 0
s Pteronotus_parnellii.KE909381.1                            15414 49 -     21811 --AG--GTATTAGC--------------------A-AGTTAAA--A-CACAGTGATAT-G-C-T--TT-CACCAG---C---T--T---C--T---T-T---C
i Pteronotus_parnellii.KE909381.1                        I 1 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40572 50 +     42204 --AG--TTATTAGC--------------------A-AGTTAAA--A-TAAGGTGATGT-G-C-T-TCT-CACCTG---A---T--T---C--T---T-T---C
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 2 C 0
s Pteropus_alecto.KB030862.1                              22977123 50 +  28871421 --AG--TTATTAGC--------------------A-AGTTAAA--A-TAAGATGATAT-G-C-T-TTT-CATCTG---A---T--T---C--T---T-T---C
i Pteropus_alecto.KB030862.1                             I 1 C 0
s Pteropus_vampyrus.KN534172.1                                7176 50 -      8028 --AG--TTATTAGC--------------------A-AGTTAAA--A-TAAGATGATAT-G-C-T-TTT-CATCTG---A---T--T---C--T---T-T---C
i Pteropus_vampyrus.KN534172.1                           I 1 C 0
s Puma_concolor.QAVW01001104.1                            20274647 50 -  38429054 --AC--TTATTTCC--------------------A-CATTAAA--G-TAAGGTGATAG-G-C-T-TCT-CACCTG---A---T--T---C--T---T-T---C
i Puma_concolor.QAVW01001104.1                           I 2 C 0
s Pygathrix_cinerea.k141_1153803                             15524 50 -     91421 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7609644 50 +   7812017 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             15523 50 -     72585 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53570924 53 +  90668790 G-AG--CTATTAGC--------------------A-AGTTAAA--G-CAACACAATAG-A-C-T-TTT-CActtg---a---t--t-tgt--t---t-t---c
i Rattus_norvegicus.chr16                                I 2 C 0
s Rhinopithecus_bieti.k119_217274                             7234 50 -     11128 G-AG--TGGTTGGC--------------------T-AGTTAAA--A-GAAGGTGATGG-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236583 50 - 195417433 G-AG--TGGTTAGC--------------------T-AGTTAAA--A-GAAGGTGATGA-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672239 50 +   7961872 G-AG--TGGTTGGC--------------------T-AGTTAAA--A-GAAGGTGATGG-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88143 49 -     96226 --AG--TTATTAGC--------------------A-AGTTAAA--A-TACAGTGATAT-G-C-C-T-T-AGTCTG---A---T--T---C--T---T-T---C
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 1 C 0
s Saguinus_bicolor.k141_8081                                   685 51 +     42994 G-AG--TTATTAGC--------------------A-AGTTAAA--C-GAAGGCGAAAGGC-T-T-TT--CATCTC---A---T--T---C--T---C-T---G
i Saguinus_bicolor.k141_8081                             I 1 C 0
s Saguinus_imperator.k141_57697                                470 51 +      1030 G-AG--TTATTAGC--------------------A-AGTTAAA--C-GAAGGCGATAGGC-T-T-TT--CATCTC---A---T--T---C--T---C-T---G
i Saguinus_imperator.k141_57697                          I 1 C 0
s Saguinus_inustus.k141_3945547                                549 51 -      8737 G-AG--TTATTAGC--------------------A-AGTTAAA--C-GAAGGCGATAGGC-T-T-TT--CATCTC---A---T--T---C--T---C-T---G
i Saguinus_inustus.k141_3945547                          I 1 C 0
s Saguinus_midas.LG03                                    209470036 51 + 209938924 G-AG--TTATTAGC--------------------A-AGTTAAA--C-GAAGGCGAAAGGC-T-T-TT--CATCTC---A---T--T---C--T---C-T---G
i Saguinus_midas.LG03                                    I 1 C 0
s Saguinus_mystax.k141_374627                                 8671 51 -      9399 G-AG--TTATTAGC--------------------A-AGTTAAA--C-GAAGGCGATAGGC-T-T-TT--CATCTC---A---T--T---C--T---C-T---G
i Saguinus_mystax.k141_374627                            I 1 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951404 52 - 121099817 A-AGCGTTATTAGC--------------------A-AGTTCAA--A-GAAGG-GAGAGGT-T-T-TT--CATCGG---A---T--T---C--T---C-T---G
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23746 52 +     46362 A-AGCGTTATTAGC--------------------A-AGTTCAA--A-GAAGG-GAGAGGT-T-T-TT--CATCGG---A---T--T---C--T---C-T---G
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               23841 52 +     45824 A-AGCGTTATTAGC--------------------A-AGTTCAA--A-GAAGG-GAGAGGT-T-T-TT--CATCGG---A---T--T---C--T---C-T---G
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             40520 52 -     64574 A-AGCGTTATTAGC--------------------A-AGTTCAA--A-GAAGG-GAGAGGT-T-T-TT--CATCGG---A---T--T---C--T---C-T---G
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               3593 52 -     23631 A-AGCGTTATTAGC--------------------A-AGTTCAA--A-GAAGG-GAGAGGT-T-T-TT--CATCGG---A---T--T---C--T---C-T---G
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 23737 52 -     61129 A-AGCGTTATTAGC--------------------A-AGTTCAA--A-GAAGG-GAGAGGT-T-T-TT--CATCGG---A---T--T---C--T---C-T---G
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5421111 51 -   5703754 G-AG--TTATTAGC--------------------A-AGTTAAA--C-GAAGGCGACAGGC-T-T-TT--CATCTG---A---T--T---C--T---C-T---G
i Sapajus_apella.ctg103                                  I 1 C 0
s Sapajus_macrocephalus.k141_351809                          56352 51 -     80660 G-AG--TTATTAGC--------------------A-AGTTAAA--C-GAAGGCGACAGGC-T-T-TT--CATCTG---A---T--T---C--T---C-T---G
i Sapajus_macrocephalus.k141_351809                      I 1 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153525 49 -    313613 --AG--TTATTAGC--------------------A-AGTGAA---A-CTAGGTGAAAT-G-C-T-TTT-CACCCA---T---T--T---C--T---T-T---C
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 1 C 0
s Semnopithecus_entellus.k141_1672505                          415 50 -     12572 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27265 50 +     39453 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            7783 50 +     27826 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             7305 50 -     19483 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                       606 50 -     12762 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                            467 50 +     13763 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                      623 35 -     30804 ------------------------------------AGTTAAA--G-TAACATGATAT-G-T-T-CTT-CACTTA-ATT---T--------------------
i Sigmodon_hispidus.SigHis_scaffold_42075                I 1 I 5
s Solenodon_paradoxus.SolPar_flattened_line_126               4112 50 +   1910179 --AG--TTACCGGC--------------------A-AGCGAAA--A-TAAGGTCATAA-G-C-T-TTT-CACCTA---A---T--G---C--T---T-T---C
i Solenodon_paradoxus.SolPar_flattened_line_126          I 1 C 0
s Sorex_araneus.JH798187.1                                13651348 41 -  18376816 --AG--TTattagg--------------------a-aattaaa--attaa-gtgatAG-G-C-T-TTT-CACCT-----------------------------
i Sorex_araneus.JH798187.1                               I 1 I 5
s Spermophilus_dauricus.KZ294078.1                         1954268 54 -   3870691 G-AC--TTATTAGC--------------------A-AGTTAAA--G-TAAGGAGATAt-g-c-t-tt-tcacttt---a---t--t---t--ttttt-t---t
i Spermophilus_dauricus.KZ294078.1                       I 1 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             31072 46 +     97271 ---G--TTATTAGC--------------------A-AGGTAAA--A-T---GTGATGT-G-C-T-TCT-CAACTG---T---T--T---C--T---T-T---C
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 2 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              18663 50 -    196729 --AG--TTATTTCC--------------------A-AGTTAAA--A-TAAGGTGATAG-G-C-T-TCT-CACCTG---A---T--T---C--T---T-T---C
i Suricata_suricatta.SurSur_flattened_line_6629          I 2 C 0
s Sus_scrofa.CM000828.4                                    6811146 49 +  69701581 ---G--TTATTAGT--------------------A-AGTTAAA--A-TAAAGTGGTAT-G-C-T-TTT-CACCTG---A---T--T---C--T---T-T---C
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                11152 50 +     41958 --AG--TTATTAGC--------------------A-AGTTAAA--A-TACGGTGAAAT-G-C-T-TTT-CACTTG---A---C--T---C--T---T-T---C
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 1 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72945 54 +    116680 AGAG--TTATTGGC--------------------A-AGTTACA--A-TAAGATGGTAG-A-C-T-CTT-ACCTCG---A---T--G---ATTT---T-C---C
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 1 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      119105 70 -    156842 --AG--TTATTAGTTATTATTATCATTTATGAAAG-AGTTAAA--A-TACAATGATAT-G-C-T-ATT-CACCTG---A---C--T---C--C---T-C---C
i Tapirus_indicus.TapInd_scaffold_9301                   I 1 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387550 70 +    539355 --AG--TTATTAGTTATTATTATCATTTATGAAAG-AGTTAAA--A-TACGATGATAT-G-C-T-ATT-CACCTG---A---T--T---C--C---T-C---C
i Tapirus_terrestris.TapTer_scaffold_755                 I 1 C 0
s Tarsius_lariang.k141_2201908                               26812 28 +     70052 G-AG--TTATTTGC--------------------A-AGTTAAA--A-TAAGGTGA------------------------------------------------
i Tarsius_lariang.k141_2201908                           C 0 I 18
s Tarsius_wallacei.k141_254427                                1609 28 -     16117 G-AG--TTATTTGC--------------------A-AGTTAAA--A-TAAGGTGA------------------------------------------------
i Tarsius_wallacei.k141_254427                           C 0 I 18
s Theropithecus_gelada.CM009954.1                        186428954 50 + 186847797 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105765 49 +    114563 G-AC--TTACTAGC--------------------A-AGTTGAA--A-TAAGATAACAT-G-G-T-TTT-CACTTC---T---T--T---T--T---T------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 2 I 1
s Tolypeutes_matacus.TolMat_scaffold_228639                   6737 52 +      8208 --AG--TTACTGGC--------------------A-AGTTACG--A-TAAGGAGGTAG-A-C-T-GTT-CACCTG---A---C--C---CTTT---T-A---C
i Tolypeutes_matacus.TolMat_scaffold_228639              I 1 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81533 50 +    610378 --AG--TTTTTAGC--------------------A-AGTTAAA--A-CATGGTGATAT-G-T-T-TTT-CATCTG---C---T--T---C--T---T-T---C
i Tonatia_saurophila.TonSau_scaffold_294                 I 1 C 0
s Trachypithecus_auratus.k141_722599                         11356 50 -     20410 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                       470 50 -     12674 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       11457 50 +     19930 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       7868 50 -     19997 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48007 50 -     60166 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        15479 50 -     27529 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     15423 50 -     18194 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9135 50 -     21137 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    7838 50 -     10723 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7010 50 +      9834 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        25323 50 +     32220 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5939425 50 +   6242583 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        8676 50 +     20839 G-AG--TTGTTAGC--------------------A-AGTTAAA--A-GAAGGTGATGG-C-C-T-TT--CACCTG---A---T--T---C--T---C-T---G
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4293577 55 +  10818551 A-AGAGTTATTAGC--------------------A-TGTTACA--G-TATGGTGATAT-G-C-T-TTT-CACCTG---A---T--C---CTCT---T-T---C
i Trichechus_manatus.JH594705.1                          I 1 C 0
s Tupaia_chinensis.KB320699.1                              2156141 51 +   4065304 G-AG--TGattagc--------------------a-agttaaa--a-taagttcACGT-G-A-C-CTT-CATCTG---A---T--T---T--T---C-T---G
i Tupaia_chinensis.KB320699.1                            I 1 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9584 51 -     10553 G-AG--TGATTAGC--------------------A-AGTTAAA--A-TAAGTCCACGT-G-C-C-CTT-CATCTG---A---T--T---T--T---T-T---G
i Tupaia_tana.TupTan_flattened_line_97126                I 1 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   53629 49 -     77625 --AG--TTATTAGC--------------------A-AGTGAA---A-CGAGGTGACAT-G-C-T-TTT-CACCTA---T---T--T---C--T---T-C---C
i Uropsilus_gracilis.UroGra_scaffold_12083               I 1 C 0
s Ursus_maritimus.KK499267.1                               4850776 50 -   5085361 --AG--TTATTAGC--------------------A-AGTTAAA--A-TAAGGTAATAT-G-T-T-TCT-Cacctg---a---t--t---c--t---t-t---c
i Ursus_maritimus.KK499267.1                             I 2 C 0
s Varecia_rubra.k141_590885                                  11736 51 +     50397 G-AG--TTATTAGC--------------------A-AGTTAAA--A-TAAGATGATAG-G-CTT-TT--CATCTG---A---T--C---C--T---T-T---C
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11795 51 +     24756 G-AG--TTATTAGC--------------------A-AGTTAAA--A-TAAGATGATAG-G-CTT-TT--CATCTG---A---T--C---C--T---T-T---C
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5372224 50 -   5488506 --AG--TTACCAGT--------------------G-AGCTAAA--A-TAAGGTGATAC-A-C-T-TT-CCACCTG---A---T--T---C--T---T-T---C
i Vicugna_pacos.KN270157.1                               I 1 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 11127 50 -     43706 --AG--CTATTAGC--------------------A-ACTTAAA--A-TAAGATGATAT-G-C-T-TCT-CATCTC---A---T--T---C--T---T-T---C
i Vulpes_lagopus.VulLag_flattened_line_30954             I 2 C 0
s Xerus_inauris.XerIna_scaffold_2302                          1395 47 +    224448 G-CA--TTATTAGC--------------------A-AGTTGAA--G-TAAGGCAATAT-G-C-T-TTT-CACTTG---A---T--T---T-------------
i Xerus_inauris.XerIna_scaffold_2302                     I 1 I 4
s Zalophus_californianus.ZalCal_flattened_line_17732          5702 38 +     86975 --AG--TTATTAGC--------------------A-AGTTAAA--A-TAAGGTGATGT-A-C-T-TA-A-AA-------------------------------
i Zalophus_californianus.ZalCal_flattened_line_17732     I 2 I 1826
s Zapus_hudsonius.ZapHud_scaffold_11398                      15219 53 +     63895 G-AG--TTATTAGC--------------------A-AGTTAAC--G-TAAGGTGATAT-G-T-T-TT-CCACTTG---AA--T-TT---T--T---T-T---C
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 2 C 0
e Saguinus_labiatus.k141_285685                               8505  5 +      8564 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       7205 1 +     62944 C
s Acinonyx_jubatus.LLWD01001279.1                           827690 1 -   1699592 C
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     71156 1 +     87051 C
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510965 1 -  29979442 c
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             79737 1 -    347723 C
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     74872 1 -     89534 C
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   15133 1 -     52922 C
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15049 1 -     28001 C
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          5547 1 -     18505 C
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           6399 1 -     12518 C
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              7994 1 +     51355 C
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                1103 1 -     36483 C
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              11552 1 +     28687 C
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                   68 1 +     27940 C
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            1113 1 -      9457 C
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                               68 1 +     30492 C
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              4063 1 +     47717 C
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                               795 1 +      5663 C
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             15247 1 +     50774 C
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185737 1 +    412891 C
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  15994 1 -     33861 C
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            16040 1 -     34016 C
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4298418 1 -   5030052 C
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             16027 1 -     34685 C
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               29152 1 -     47192 C
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      12989 1 +     20879 C
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 4 C 0
s Arctocebus_calabarensis.k141_2318572                       11840 1 +     14667 C
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5127 1 +     43469 C
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  54074 1 -     92717 C
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54695 1 +     85213 C
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             5841 1 -     10423 C
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             25310 1 +     31915 C
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590995 1 - 189096842 C
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                               394 1 -     12329 C
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002741 1 -  17673402 C
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2335217 1 -   7040546 C
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  403514 1 -   1652518 C
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17799554 1 -  60362399 C
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                      302 1 -     43241 C
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034997 1 -   9314153 C
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17959473 1 -  59632846 C
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18500774 1 +  63665305 C
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1425 1 -     12242 C
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           156367 1 -    496798 C
i Carlito_syrichta.NW_007259797.1                        I 18 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5492 1 -     11696 C
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137459 1 +    179628 A
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     93448 1 +    217609 C
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                         10476 1 -     11392 C
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               6543 1 -      7577 C
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25653208 1 +  26074798 C
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                1146 1 +     28840 C
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                  871 1 +     14051 C
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         5865 1 +     31688 C
i Cephalopachus_bancanus.k141_1423433                    I 18 C 0
s Ceratotherium_simum.JH767749.1                          12231836 1 +  27778364 C
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2863 1 -     25243 C
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4476064 1 +   4669795 C
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                         568 1 +     17872 C
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           1225 1 -     14043 C
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9258 1 +     27781 C
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         9424 1 -     20310 C
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          12404 1 +     29689 C
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          15072 1 -     27936 C
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            3942 1 -     17152 C
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38817483 1 +  39242232 C
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223173 1 -  21565898 C
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40291 1 -     53127 C
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                         542 1 +     13442 C
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15091 1 -     27947 C
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         15067 1 +     17596 C
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          1114 1 +     14005 C
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             911 1 -      8501 C
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             21444 1 -     52598 C
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16809 1 +     57038 C
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1253191 1 +   2543920 c
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2206961                            742 1 -     15524 C
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18429051 1 -  18827391 C
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15488 1 -     50209 C
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422488 1 + 135778131 C
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 18689 1 +     19366 C
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            173766 1 +    839153 C
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1911001 1 +   2368649 C
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949253 1 + 200372422 C
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37535 1 +     84244 C
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17548455 1 -  53390261 C
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14789 1 -     20389 C
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetulus_griseus.LT883664.1                           11667925 1 + 224834208 c
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28876 1 -     87169 C
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837462 1 +   1526836 C
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  36313 1 +     51376 C
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            63929 1 +   2246927 c
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537666 1 -  12879189 C
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630509 1 +  20541912 c
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673685 1 +   1390856 C
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6436 1 +    198055 C
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36775 1 +     67921 C
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Echinops_telfairi.JH980293.1                            48781022 1 + 111700974 c
i Echinops_telfairi.JH980293.1                           I 44 I 9
s Eidolon_helvum.KE759718.1                                  10914 1 +     11740 C
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1098040 1 +  10337057 C
i Elephantulus_edwardii.JH947257.1                       C 0 I 79
s Ellobius_lutescens.LOEQ01008920.1                          20647 1 -    110024 c
i Ellobius_lutescens.LOEQ01008920.1                      I 9 C 0
s Ellobius_talpinus.LOJH01081419.1                             778 1 +      8657 c
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16329693 1 -  41312741 c
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2146116 1 -  14770903 C
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1283944 1 +   4378816 C
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18531764 1 -  39960074 C
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               33793 1 +    498745 C
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3328586 1 -   7059049 C
i Erinaceus_europaeus.JH835339.1                         I 18 C 0
s Erythrocebus_patas.Contig38                             21205656 1 -  21539334 C
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_576796                              40489 1 -     44621 T
i Eulemur_albifrons.k141_576796                          C 0 C 0
s Eulemur_collaris.k141_377015                                6870 1 -     16928 T
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15902 1 -     25546 T
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            13098 1 +     26330 T
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14333 1 +     23973 T
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                13095 1 +     75513 T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 11025 1 +     97555 T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              516 1 +     13026 T
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4569 1 -     17153 T
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              14142 1 +    111500 T
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237332 1 + 206538554 C
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20196175 1 + 205367284 C
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  9928 1 -     36744 C
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             850817 1 +   3816255 c
i Fukomys_damarensis.KN121974.1                          I 1 C 0
s Galago_moholi.ctg2040                                     426988 1 -    453645 T
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4678 1 +     11339 T
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            1976 1 +     41679 T
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1575 1 -      9135 T
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            31735 1 +     49224 C
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              16460 1 -     32273 C
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186338596 1 + 186649187 C
i Gorilla_gorilla.LT578341.1                             I 49 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   32987 1 +     78134 C
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 8
s Hapalemur_alaotrensis.k141_170648                           7201 1 -     19426 T
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12350 1 -     15286 T
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13989 1 +     18253 T
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         14090 1 -     41752 T
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13927 1 -     16460 T
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242710 1 +    327341 C
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1275 1 +      7595 C
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hoolock_leuconedys.ctg274                                    435260 1 +    630532 C
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45403 1 +     55795 C
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 1 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83476 1 +    135385 T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7521267 1 -   7955117 c
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   22887 1 +     31101 C
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8277174 1 -   9596543 C
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    16761 1 -     42476 C
i Lasiurus_borealis.LasBor_scaffold_32767                I 51 C 0
s Lemur_catta.scaffold_24                                 15524442 1 -  30322482 T
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        8120 1 +     64341 C
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                            460 1 -     35062 C
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        8148 1 +     35603 C
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    29562 1 +     38576 C
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         26262 1 +     66356 C
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         11334 1 -     23766 C
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29395 1 +     45836 C
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1933 1 +     25010 C
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27331 1 +     54090 C
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3043436 1 +   3914936 C
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6860 1 -     14121 C
i Lepus_americanus.LepAme_scaffold_107385                I 18 C 0
s Lophocebus_aterrimus.ctg367                              1437609 1 +   1826925 C
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            6236 1 +     11245 T
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1005057 1 +   6120653 T
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4217707 1 -  43346337 C
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17955713 1 -  59628241 c
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               7422 1 +     40492 C
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59676681 1 +  60120075 C
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13197 1 -     26193 C
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            80981 1 -    114318 C
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  6668 1 -     23192 C
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16141 1 -     29190 C
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  24706 1 +     37952 C
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186839795 1 + 187317192 C
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458358 1 -  25927173 C
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  80554 1 +     89720 C
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 7555 1 +     20474 C
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   7355 1 -     14993 C
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  330221 1 -    668171 C
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 5668 1 -     24072 C
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26293 1 -     45290 C
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91005 1 +     94391 C
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23937884 1 -  24302211 C
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352008 1 +    752769 C
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              18897 1 +    737560 C
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              50883 1 -    317179 C
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33103465 1 -  40650429 c
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        10825 1 -    207569 C
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10428 1 +     13704 C
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 33109 1 +    140813 C
i Meriones_unguiculatus.MerUng_scaffold_7390             I 1 C 0
s Mesocricetus_auratus.KB708134.1                         12182598 1 -  29670104 c
i Mesocricetus_auratus.KB708134.1                        I 4 C 0
s Mico_argentatus.k141_1239457                                6355 1 -      7380 C
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_2457295                                584 1 +      1079 C
i Mico_humeralifer.k141_2457295                          C 0 C 0
s Mico_schneideri.k141_1950671                                      6367 1 -      7356 C
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18291868 1 -  93316391 C
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    22728 1 -    145209 C
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 9
s Micronycteris_hirsuta.MicHir_scaffold_52381                16032 1 -     19307 C
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11260828 1 -  27267610 C
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850988 1 +   8254450 C
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34669 1 +     64694 C
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9590 1 -     28506 C
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6304 1 -      8324 C
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      9412 1 -     37649 C
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142012 1 -    366855 C
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35810 1 +     37127 C
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           7211 1 +     14753 C
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84361714 1 - 120012414 c
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87650711 1 - 129401213 c
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31355369 1 -  89631738 c
i Mus_pahari.LT608297.1                                  I 2 C 0
s Mus_spretus.CM004101.1                                  90752772 1 - 130317789 c
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              5313 1 +     14296 C
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               301842 1 -  14710649 c
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71626 1 -     80779 C
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                280855 1 -  10118263 C
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1588111 1 -   6019432 C
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3904209 1 -   4330536 C
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                         358 1 +      1835 C
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189640 1 +    196477 T
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2034444 1 -   3037898 C
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               15592 1 +     21681 C
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20307890 1 +  31847680 C
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    758265 1 +    783361 C
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149781 1 -   9404916 c
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102586601 1 - 196305487 T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              525 1 +      2075 T
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761956 1 + 199412804 T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1363918 1 +   3988456 C
i Ochotona_princeps.JH802162.1                           I 18 C 0
s Octodon_degus.JH651603.1                                  747234 1 +  11899542 c
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                              507035 1 -   2017862 C
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   25496 1 +     28053 C
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    80504 1 +    102263 C
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387              10472 1 -     18566 C
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 I 19
s Oryctolagus_cuniculus.CM000791.1                        67147720 1 + 174332312 C
i Oryctolagus_cuniculus.CM000791.1                       I 18 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462729 1 -    559221 C
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4508 1 +      8798 T
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696671 1 -   1103335 T
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    44548 1 +     80009 C
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189143449 1 + 189151597 C
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  151541 1 +    230217 C
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                264750 1 +  18783137 C
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4721629 1 -   8748460 C
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183443686 1 + 183742232 C
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7332 1 +     20448 C
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20564144 1 +  20919399 C
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6076 1 +     41871 C
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     9369 1 +     27711 C
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                   366 1 -     11374 C
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13040 1 -     78924 T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10484 1 +     13100 C
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8890 1 +     25941 C
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18195129 1 -  18517816 c
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28498 1 -     29689 C
i Petromus_typicus.PetTyp_scaffold_42190                 I 1 C 0
s Piliocolobus_badius.k141_1234363                           44083 1 +     62158 C
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        38830 1 +     89929 C
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40246 1 +     51399 C
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296484 1 -  14605196 C
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2150 1 +     22620 C
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189131587 1 + 189387572 C
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9571194 1 +   9816681 C
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               73768 1 -     81375 C
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              5588 1 +     19060 C
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 13730 1 -     22811 C
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2597122 1 -   4620579 T
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     991108 1 +   2598838 C
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29420 1 +     38485 C
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1463 1 -     13098 C
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26941 1 +     35766 C
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           5128 1 -     24134 C
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28953 1 -     67325 C
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           5176 1 -      6182 C
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            10755 1 -     21651 c
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            15463 1 -     21811 C
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40622 1 +     42204 C
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22977173 1 +  28871421 C
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                7226 1 -      8028 C
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20274697 1 -  38429054 C
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15574 1 -     91421 C
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7609694 1 +   7812017 C
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             15573 1 -     72585 C
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53570977 1 +  90668790 c
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             7284 1 -     11128 C
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236633 1 - 195417433 C
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672289 1 +   7961872 C
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88192 1 -     96226 C
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_8081                                   736 1 +     42994 C
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_57697                                521 1 +      1030 C
i Saguinus_imperator.k141_57697                          C 0 C 0
s Saguinus_inustus.k141_3945547                                600 1 -      8737 C
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_midas.LG03                                    209470087 1 + 209938924 C
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 8722 1 -      9399 C
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951456 1 - 121099817 C
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23798 1 +     46362 C
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               23893 1 +     45824 C
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             40572 1 -     64574 C
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               3645 1 -     23631 C
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 23789 1 -     61129 C
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5421162 1 -   5703754 C
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          56403 1 -     80660 C
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153574 1 -    313613 C
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                          465 1 -     12572 C
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27315 1 +     39453 C
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            7833 1 +     27826 C
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             7355 1 -     19483 C
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                       656 1 -     12762 C
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                            517 1 +     13763 C
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                      663 1 -     30804 C
i Sigmodon_hispidus.SigHis_scaffold_42075                I 5 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               4162 1 +   1910179 C
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13651394 1 -  18376816 T
i Sorex_araneus.JH798187.1                               I 5 C 0
s Spermophilus_dauricus.KZ294078.1                         1954322 1 -   3870691 c
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             31118 1 +     97271 C
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              18713 1 -    196729 C
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6811195 1 +  69701581 C
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                11202 1 +     41958 C
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 72999 1 +    116680 T
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      119175 1 -    156842 C
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387620 1 +    539355 C
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               26858 1 +     70052 C
i Tarsius_lariang.k141_2201908                           I 18 C 0
s Tarsius_wallacei.k141_254427                                1655 1 -     16117 C
i Tarsius_wallacei.k141_254427                           I 18 C 0
s Theropithecus_gelada.CM009954.1                        186429004 1 + 186847797 C
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105815 1 +    114563 C
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 1 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   6789 1 +      8208 C
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81583 1 +    610378 C
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         11406 1 -     20410 C
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                       520 1 -     12674 C
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       11507 1 +     19930 C
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       7918 1 -     19997 C
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48057 1 -     60166 C
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        15529 1 -     27529 C
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     15473 1 -     18194 C
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9185 1 -     21137 C
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    7888 1 -     10723 C
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7060 1 +      9834 C
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        25373 1 +     32220 C
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5939475 1 +   6242583 C
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        8726 1 +     20839 C
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4293632 1 +  10818551 C
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2156192 1 +   4065304 C
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9635 1 -     10553 C
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   53678 1 -     77625 T
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4850826 1 -   5085361 c
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  11787 1 +     50397 C
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11846 1 +     24756 C
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5372274 1 -   5488506 C
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 11177 1 -     43706 C
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          1446 1 +    224448 C
i Xerus_inauris.XerIna_scaffold_2302                     I 4 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      15272 1 +     63895 C
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Saguinus_labiatus.k141_285685                               8505 5 +      8564 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20662574 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Crocidura_indochinensis.CroInd_scaffold_37019               3361 1 -     19598 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 50546 0 +     63868 C
e Cercopithecus_diana.k141_1150327                            7155 0 -     20078 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       7206 16 +     62944 TTTGCCT--------A-------C-----ACA---AA-AT
s Acinonyx_jubatus.LLWD01001279.1                           827691 15 -   1699592 TTTACC---------A-------C-----CAA---GA-AC
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     71157 29 +     87051 TTTGCCCCCACCCCCG-------CCTCC-ACA--CAC-AC
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510966 16 -  29979442 tttgccc--------a-------c-----ata---aa-ac
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             79738 16 -    347723 TTTGCCC--------A-------C-----ATA---AC-AC
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     74873 16 -     89534 TTTGCCC--------A-------C-----ACA---AA-AC
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   15134 16 -     52922 TTTGCCT--------A-------C-----AGA---AA-AC
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15050 16 -     28001 TTTGCCT--------A-------C-----AGA---AA-AC
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          5548 16 -     18505 TTTGCCT--------A-------C-----AGA---AA-AC
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           6400 16 -     12518 TTTGCCT--------A-------C-----AGA---AA-AC
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              7995 16 +     51355 TTTGCCT--------A-------C-----CCA---AA-AT
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                1104 16 -     36483 TTTGCCT--------A-------C-----ACA---AA-AT
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              11553 16 +     28687 TTTGCCT--------A-------C-----ACA---AA-AT
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                   69 16 +     27940 TTTGCCT--------A-------C-----ACA---AA-AT
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            1114 16 -      9457 TTTGCCT--------A-------C-----ACA---AA-AT
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                               69 16 +     30492 TTTGCCT--------A-------C-----ACA---AA-AT
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              4064 16 +     47717 TTTACCT--------A-------C-----ACA---AA-AT
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                               796 16 +      5663 TTTGCCT--------A-------C-----ACA---AA-AT
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             15248 16 +     50774 TTTGCCT--------A-------C-----ACA---AA-AT
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185738 16 +    412891 TTTTCTC--------A-------C-----ACA---AA-AT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  15995 16 -     33861 TTTGCCT--------A-------C-----ACA---AA-AT
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            16041 16 -     34016 TTTGCCT--------A-------C-----ACA---AA-AT
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4298419 16 -   5030052 TTTGCCT--------A-------C-----ACA---AA-AT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             16028 16 -     34685 TTTGCCT--------A-------C-----ACA---AA-AT
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               29153 16 -     47192 TTTGCCT--------A-------C-----ACA---AA-AT
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      12990 15 +     20879 TTTGCCC--------A-------C-----A-A---AA-AC
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       11841 16 +     14667 TTTGCCC--------A-------C-----ACA---AA-AC
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5128 16 +     43469 TTTTCTC--------A-------C-----ACA---AC-AT
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  54075 16 -     92717 TTTGTCC--------A-------C-----ACA---AA-AC
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54696 16 +     85213 TTTGTCC--------A-------C-----ACA---AA-AC
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             5842 16 -     10423 TTTGCCT--------A-------C-----GCA---AA-AT
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             25311 16 +     31915 TTTGCCT--------A-------C-----ACA---AA-AT
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23590996 16 - 189096842 TTTGCCT--------A-------C-----GCA---AA-AC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                               395 16 -     12329 TTTGCCT--------A-------C-----GCA---AA-AC
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002742 16 -  17673402 TTTGCCC--------A-------C-----ACA---AA-AC
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2335218 16 -   7040546 TTTGCCC--------A-------C-----ACA---AA-AC
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  403515 16 -   1652518 TTTGCCC--------A-------C-----ACA---AA-AC
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17799555 16 -  60362399 TTTGCCC--------A-------C-----ATA---AA-AC
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                      303 16 -     43241 TTTGCCC--------A-------C-----ATA---AA-AC
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9034998 16 -   9314153 TTTGCCC--------A-------C-----ATA---AA-AC
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17959474 16 -  59632846 TTTGCCC--------A-------C-----ATA---AA-AC
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18500775 16 +  63665305 TTTGCCC--------A-------C-----ATA---AA-AC
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1426 15 -     12242 TTTGCCT--------A-------C-----ACA----A-TC
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           156368 16 -    496798 CTTACCC--------A-------C-----ACA---AA-AC
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5493 16 -     11696 TTTCCTT--------A-------T-----ACA---AA-AT
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137460 16 +    179628 TTTGACC--------A-------C-----ACA---AA-GC
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     93449 16 +    217609 TTTGCTC--------A-------C-----ATA---AA-AC
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                         10477 16 -     11392 TTTGCCT--------A-------C-----GCA---AA-AT
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               6544 16 -      7577 TTTGCCT--------A-------C-----GCA---AA-AT
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25653209 16 +  26074798 TTTGCCT--------A-------C-----ACA---AA-AT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                1147 16 +     28840 TTTGCCT--------A-------C-----ACA---AA-AT
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                  872 16 +     14051 TTTGCCT--------A-------C-----ACA---AA-AT
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         5866 16 +     31688 CTTACCC--------A-------C-----GCA---AA-AC
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12231837 16 +  27778364 TTTGCCT--------A-------C-----ACA---AA-AT
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2864 16 -     25243 TTTGCCT--------A-------C-----ACA---AA-AT
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4476065 16 +   4669795 TTTGCCT--------A-------C-----AGA---AA-AT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                         569 16 +     17872 TTTGCCT--------A-------C-----AGA---AA-AT
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           1226 16 -     14043 TTTGCCT--------A-------C-----AGA---AA-AT
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9259 16 +     27781 TTTGCCT--------A-------C-----AGA---AA-AT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         9425 16 -     20310 TTTGCCT--------A-------C-----AGA---AA-AC
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          12405 16 +     29689 TTTGCCT--------A-------C-----AGA---AA-AC
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7155 16 -     20078 TTTGCCT--------A-------C-----AGA---AA-AC
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          15073 16 -     27936 GGTGCCT--------A-------C-----AGA---AA-AT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            3943 16 -     17152 TTTGTCT--------A-------C-----AGA---AA-AC
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38817484 16 +  39242232 TTTGCCT--------A-------C-----AGA---AA-AC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223174 16 -  21565898 TTTGTCT--------A-------C-----AGA---AA-AC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40292 16 -     53127 TTTGTCT--------A-------C-----AGA---AA-AC
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                         543 16 +     13442 TTTGCCT--------A-------C-----AGA---AA-AC
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15092 16 -     27947 TGTGCCT--------A-------C-----AGA---AA-AT
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         15068 16 +     17596 TTTGTCT--------A-------C-----AGA---AA-AC
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          1115 16 +     14005 TTTGCCT--------A-------C-----AGA---AA-AC
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             912 16 -      8501 TTTGCCC--------A-------C-----ACA---A-AAC
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             21445 16 -     52598 TTTGCCC--------A-------C-----ACA---CA-AC
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16810 16 +     57038 TTTGCCC--------A-------C-----ACA---CA-AC
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1253192 16 +   2543920 tttgcct--------a-------C-----ACA---AA-TG
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2206961                            743 16 -     15524 TTTGCCT--------A-------C-----ACA---AA-AT
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18429052 16 -  18827391 TTTGCCT--------A-------C-----AGA---AA-AC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15489 16 -     50209 TTTGCCT--------A-------C-----AGA---AA-AC
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422489 16 + 135778131 TTTGCCT--------A-------C-----AGA---AA-AC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 18690 15 +     19366 TTTGCCT--------G-------C-----ACA---A--AT
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            173767 15 +    839153 TTTGCCT--------G-------C-----ACA---A--AT
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1911002 16 +   2368649 TTTGCCT--------A-------C-----AGA---AT-AT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949254 16 + 200372422 TTTGCCT--------A-------C-----AGA---AT-AT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37536 16 +     84244 TTTGCCT--------A-------C-----AGA---AT-AT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17548456 16 -  53390261 TCAACGC--------A-------C-----ACA---AG-Tt
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14790 16 -     20389 TTTGCCC--------A-------T-----ACA---AA-AC
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetulus_griseus.LT883664.1                           11667926 21 + 224834208 tttgctc----tcaca-------c-----aca--aaa-ag
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               3362 21 -     19598 ATCATTT--------CCATGAAAT-----AGA---CT---
i Crocidura_indochinensis.CroInd_scaffold_37019          I 1 I 10
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28877 16 -     87169 TTTACCC--------A-------C-----ATA---AA-AC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837463 16 +   1526836 TTTACCC--------A-------C-----ACA---AA-AG
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  36314 15 +     51376 TTTGCCC--------A-------C-----ACA----G-TC
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            63930  4 +   2246927 tttg------------------------------------
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537667 16 -  12879189 TTTGTCC--------A-------C-----ACA---AA-AC
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630510 15 +  20541912 ttttctc--------a-------c-----a-a---GA-AT
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673686 16 +   1390856 TTTGCCT--------A-------C-----ACA---AA-AT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6437 16 +    198055 TTTGCCT--------A-------C-----ACA---AA-AT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36776 16 +     67921 TTTGCCT--------A-------C-----ATA---AT-TC
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Eidolon_helvum.KE759718.1                                  10915 16 +     11740 TTTACCC--------A-------C-----ACA---AA-AT
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1098120 16 +  10337057 TATGTCC--------a-------t-----gca---aa-ga
i Elephantulus_edwardii.JH947257.1                       I 79 I 39
s Ellobius_lutescens.LOEQ01008920.1                          20648 21 -    110024 tttgccCTCGC----A-------C-----ACA--GAA-AG
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                             779 21 +      8657 tttgcccTCGC----A-------C-----ACA--GAA-AG
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16329694 16 -  41312741 tttgccc--------A-------T-----ATA---AA-AC
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2146117 16 -  14770903 TTTGCCC--------A-------C-----ACA---AA-AC
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1283945 16 +   4378816 TTTGCCT--------A-------C-----ACA---AA-AT
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18531765 16 -  39960074 TTTGCCT--------A-------C-----ACA---AA-AT
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               33794 16 +    498745 TTTGCCT--------A-------C-----ACA---AA-AT
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3328587 16 -   7059049 ATGACCC--------A-------C-----ACA---AA-AT
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21205657 16 -  21539334 TTTGCCT--------A-------C-----AGA---AA-AC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_576796                              40490 16 -     44621 GTTGCCC--------A-------C-----ACA---CA-AC
i Eulemur_albifrons.k141_576796                          C 0 C 0
s Eulemur_collaris.k141_377015                                6871 16 -     16928 GTTGCCC--------A-------C-----ACA---CA-AC
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15903 16 -     25546 GTTGCCC--------A-------C-----ACA---CA-AC
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            13099 16 +     26330 GTTGCCC--------A-------C-----ACA---CA-AC
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14334 16 +     23973 GTTGCCC--------A-------C-----ACA---CA-AC
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                13096 16 +     75513 GTTGCCC--------A-------C-----ACA---CA-AC
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 11026 16 +     97555 GTTGCCC--------A-------C-----ACA---CA-AC
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              517 16 +     13026 GTTGCCC--------A-------C-----ACA---TA-AC
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4570 16 -     17153 GTTGCCC--------A-------C-----ACA---CA-AC
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              14143 16 +    111500 GTTGCCC--------A-------C-----ACA---CA-AC
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237333 15 + 206538554 TTTACC---------A-------C-----CAA---GA-AC
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20196176 15 + 205367284 TTTACC---------A-------C-----CAA---GA-AC
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  9929 15 -     36744 TTTACC---------A-------C-----CAA---GA-AC
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             850818 16 +   3816255 tttgccc--------a-------c-----ACA---AA-AC
i Fukomys_damarensis.KN121974.1                          C 0 I 1
s Galago_moholi.ctg2040                                     426989 16 -    453645 TTTGCCC--------A-------C-----ACA---AA-AC
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4679 16 +     11339 TTTGCCC--------A-------C-----ACA---AA-AC
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            1977 16 +     41679 TTTGCCC--------A-------C-----ACA---AA-AC
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1576 16 -      9135 TTTGTCC--------A-------C-----ACA---AA-AC
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            31736 20 +     49224 TTTCTTT--ACCC--A-------C-----ACA---AA-AC
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              16461 16 -     32273 TTTGCCT--------A-------C-----ACA---AA-AT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186338597 16 + 186649187 TTTGCCT--------A-------C-----ACA---AA-AT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   32996  8 +     78134 -----------------------T-----ACA---AA-AC
i Graphiurus_murinus.GraMur_scaffold_10447               I 8 C 0
s Hapalemur_alaotrensis.k141_170648                           7202 16 -     19426 GTTGCCC--------A-------C-----ACA---CA-AC
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12351 16 -     15286 GTTGCCC--------A-------C-----ACA---CA-AC
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             13990 16 +     18253 GTTGCCC--------A-------C-----ACA---CA-AC
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         14091 16 -     41752 GTTGCCC--------A-------C-----ACA---CA-AC
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13928 16 -     16460 GTTGCCC--------A-------C-----ACA---CA-AC
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242711 16 +    327341 TTTACCC--------C-------C-----ATA---AA-AC
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20662574 11 +  22651954 -----CC--------A-------C-----ACA---AA-AC
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1276 16 +      7595 TTTGCCC--------A-------T-----GCA---AA-AC
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hoolock_leuconedys.ctg274                                    435261 12 +    630532 T----CT--------A-------C-----ACA---AA-AT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45404 16 +     55795 TTTACCC--------A-------C-----ATA---AA-AT
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83477 16 +    135385 CTTTTCC--------C-------C-----ACA---AA-AA
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7521268 16 -   7955117 tttgcct--------a-------c-----aCA---AA-AC
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   22888 16 +     31101 TTTGCCC--------A-------C-----ACA---AA-AC
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8277175 16 -   9596543 TCTGCCC--------A-------C-----ACA---AA-AC
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    16762 16 -     42476 TTTGCCC--------A-------C-----ACA---AA-AC
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 40
s Lemur_catta.scaffold_24                                 15524443 16 -  30322482 GTTGCCC--------A-------C-----ACA---CA-AC
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        8121 16 +     64341 TTTGCCT--------A-------C-----ACA---AA-AT
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                            461 16 -     35062 TTTGCCT--------A-------C-----ACA---AA-AT
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        8149 16 +     35603 TTTGCCT--------A-------C-----ACA---AA-AT
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    29563 16 +     38576 TTTGCCT--------A-------C-----ACA---AA-AT
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         26263 16 +     66356 TTTGCCT--------A-------C-----ACA---AA-AT
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         11335 16 -     23766 TGTGCCC--------A-------C-----ACA---CA-AC
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29396 16 +     45836 TGTGCCC--------A-------C-----ACA---CA-AC
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1934 16 +     25010 TGTGCCC--------A-------C-----ACA---CA-AC
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27332 16 +     54090 TGTGCCC--------A-------C-----ACA---CA-AC
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3043437 16 +   3914936 TTTGCCC--------A-------C-----ATA---AA-Ac
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6861 16 -     14121 TTTGCCC--------A-------C-----GCA---AA-AC
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437610 16 +   1826925 TTTGCCT--------A-------C-----AGA---AA-AT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            6237 16 +     11245 TTTGCCC--------A-------C-----ACA---TA-AC
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1005058 16 +   6120653 TTTGCCC--------A-------C-----ACA---TA-AC
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4217708 16 -  43346337 TTTGCCC--------A-------T-----GCA---AA-AC
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17955714 16 -  59628241 tttgccC--------A-------C-----ATA---AA-AC
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               7423 16 +     40492 TTTGCCT--------A-------C-----AGA---AA-AT
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59676682 16 +  60120075 TTTGCCT--------A-------C-----AGA---AA-AT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13198 16 -     26193 TTTGCCT--------A-------C-----AGA---AA-AT
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            80982 16 -    114318 TTTGCCT--------A-------C-----AGA---AA-AT
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  6669 16 -     23192 TTTGCCT--------A-------C-----AGA---AA-AT
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16142 16 -     29190 TTTGCCT--------A-------C-----AGA---AA-AT
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  24707 16 +     37952 TTTGCCT--------A-------C-----AGA---AA-AT
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186839796 16 + 187317192 TTTGCCT--------A-------C-----AGA---AA-AT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458359 16 -  25927173 TTTGCCT--------A-------C-----AGA---AA-AT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  80555 16 +     89720 TTTGCCT--------A-------C-----AGA---AA-AT
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 7556 16 +     20474 TTTGCCT--------A-------C-----AGA---AA-AT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   7356 16 -     14993 TTTGCCT--------A-------C-----AGA---AA-AT
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  330222 16 -    668171 TTTGCCT--------A-------C-----AGA---AA-AT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 5669 16 -     24072 TTTGCCT--------A-------C-----AGA---AA-AT
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26294 16 -     45290 TTTGCCT--------A-------C-----AGA---AA-AT
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91006 16 +     94391 TTTGCCC--------A-------C-----ACA---AA-AT
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23937885 16 -  24302211 TTTGCCT--------A-------C-----AGA---AA-AT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352009 16 +    752769 TTTGCCT--------A-------C-----AGA---AA-AT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              18898 16 +    737560 TTTGCCT--------A-------C-----ACA---AA-AC
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              50884 16 -    317179 TTTGCCC--------A-------C-----ACA---AA-AC
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33103466 16 -  40650429 tttgccc--------a-------c-----ACA---AA-Ac
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        10826 16 -    207569 TTTGCCC--------A-------T-----ATA---AA-AC
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10429 16 +     13704 TTTGCCC--------A-------T-----ATA---AA-AC
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 33110 27 +    140813 TGTGCCCCC-CC---A-------CCTCC-ACATACAC-AA
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12182599 21 -  29670104 tttgctc----tgaca-------c-----aca--aaa-ag
i Mesocricetus_auratus.KB708134.1                        C 0 I 5
s Mico_argentatus.k141_1239457                                6356 16 -      7380 TTTGCCT--------A-------C-----GCA---AA-AT
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_2457295                                585 16 +      1079 TTTGCCT--------A-------C-----GCA---AA-AT
i Mico_humeralifer.k141_2457295                          C 0 C 0
s Mico_schneideri.k141_1950671                                      6368 16 -      7356 TTTGCCT--------A-------C-----GCA---AA-AT
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18291869 16 -  93316391 TTTGCCC--------A-------C-----ACA---CA-AC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                16033 16 -     19307 TTTTCTC--------A-------C-----ACA---AA-AC
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11260829 21 -  27267610 TTTGcca----tcaca-------c-----aca--gaa-aa
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1850989 16 +   8254450 TTTGCCC--------A-------C-----ACA---AA-AC
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34670 16 +     64694 TTTGCCC--------A-------C-----ACA---AA-AC
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9591 16 -     28506 TTTGCCT--------A-------C-----AGA---AA-AC
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6305 16 -      8324 TTTGCCC--------A-------C-----ATA---AA-AC
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      9413 16 -     37649 TTTGCCC--------A-------C-----ACA---CA-AC
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142013 16 -    366855 TTTGCTC--------A-------C-----ACA---AA-AC
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35811 16 +     37127 TTTACCC--------A-------C-----ATA---AA-AC
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           7212 16 +     14753 TTTGCCC--------A-------C-----ACA---AA-AC
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84361715 26 - 120012414 tttgccaCC-CC---A-------C-TCCCAAC-ACAC-CA
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87650712 26 - 129401213 tttgccacC-CC---A-------C-TCCCAAC-ACAC-CA
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31355370 26 -  89631738 ctTGCCACC-CC---A-------C-TCCCAAA-ACAC-CA
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90752773 26 - 130317789 tttgcca-ccCC---A-------C-TCCCAAC-ACAC-CA
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              5314 21 +     14296 TTTGCCCACACC---A-------C-----ACA---AA-AC
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               301843 16 -  14710649 tttgccc--------A-------T-----CTA---AA-AC
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71627 15 -     80779 TTTGCCT--------A-------C-----ACA----A-TC
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                280856 16 -  10118263 TTTGCCC--------A-------C-----ACA---AA-AC
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1588112 16 -   6019432 TTTGCCC--------A-------C-----ACA---AA-AC
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3904210 16 -   4330536 TTTGCCC--------A-------C-----ACA---AA-AC
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                         359 16 +      1835 TTTGCCC--------A-------C-----ACA---AA-AC
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189641 16 +    196477 TTTGCCC--------A-------T-----ACA---AA-AC
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2034445 16 -   3037898 TTTGTCA--------A-------C-----ACA---AA-AC
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               15593 16 +     21681 TTTGCCT--------A-------C-----AGA---AA-AT
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20307891 16 +  31847680 TTTGCCC--------A-------C-----ATA---AA-Ac
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    758266 16 +    783361 TTTGCTC--------A-------C-----ATA---AA-AC
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149782 16 -   9404916 tttgccC--------A-------C-----ATA---AA-AC
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102586602 16 - 196305487 TTTGCCC--------A-------C-----ACA---AA-AC
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              526 16 +      2075 TTTGCCC--------A-------C-----ACA---AA-AC
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761957 16 + 199412804 TTTGCCC--------A-------C-----ACA---AA-AC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1363919 16 +   3988456 TTTGCTC--------A-------T-----ACA---AA-AC
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  747235 15 +  11899542 tttgtct--------a-------C-----ACA----A-TC
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                              507036 16 -   2017862 TTTGCCC--------A-------C-----ATA---AA-Ac
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   25497 21 +     28053 TTTGCCCTCGC----A-------C-----ACA--GAA-AG
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    80505 21 +    102263 TTTGCTCTCAC----A-------C-----ACA-A-AA-AG
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387              10492 16 -     18566 TTTGCCC--------A-------T-----GAG---AA-CT
i Orycteropus_afer.OryAfe_flattened_line_144387          I 19 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147721 16 + 174332312 TTTGCCC--------A-------C-----GCA---AA-AC
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462730 16 -    559221 TTTGCCC--------A-------C-----ATA---AA-AC
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4509 16 +      8798 TTTGCCC--------A-------C-----ACA---AA-AC
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696672 16 -   1103335 TTTGCCC--------A-------C-----ACA---AA-AC
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    44549 16 +     80009 TTTGCCT--------A-------C-----ACA---AA-AT
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189143450 16 + 189151597 TTTGCCT--------A-------C-----ACA---AA-AT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  151542 15 +    230217 TTTACC---------A-------C-----CAA---GA-AC
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                264751 15 +  18783137 TTTACC---------A-------C-----CAA---GA-AC
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4721630 15 -   8748460 TTTACC---------A-------C-----CAA---GA-AC
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183443687 16 + 183742232 TTTGCCT--------A-------C-----AGA---AA-AT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7333 16 +     20448 TTTGCCT--------A-------C-----AGA---AA-AT
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20564145 16 +  20919399 TTTGCCT--------A-------C-----AGA---AA-AT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6077 16 +     41871 TTTGCCT--------A-------C-----AGA---AA-AT
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     9370 16 +     27711 TTTGCCT--------A-------C-----AGA---AA-AT
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                   367 16 -     11374 TTTGCCT--------A-------C-----AGA---AA-AT
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13041 16 -     78924 TTTATGC--------A-------C-----ATA---AA-AG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10485 16 +     13100 TTTGCCC--------A-------C-----ACA---AA-AC
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8891 16 +     25941 TTTGCCC--------A-------C-----ACA---AA-AC
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18195130 21 -  18517816 tttgctc----tcaaa-------c-----aca--aaa-ag
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28499 16 -     29689 TTTGCTC--------A-------C-----ACA---AA-AC
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Piliocolobus_badius.k141_1234363                           44084 16 +     62158 TTTGCCT--------A-------C-----AGA---AT-AT
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        38831 16 +     89929 TTTGCCT--------A-------C-----AGA---AT-AT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40247 16 +     51399 TTTGCCT--------A-------C-----AGA---AT-AT
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296485 16 -  14605196 TTTGCCT--------A-------C-----AGA---AT-AT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2151 16 +     22620 TTTTCCC--------A-------C-----ACA---AG-AC
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189131588 16 + 189387572 TTTGCCT--------A-------C-----ACA---AA-AT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9571195 16 +   9816681 TTTGCCT--------A-------C-----ACA---AA-AT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               73769 16 -     81375 TTTGCCT--------A-------C-----AGA---AA-AT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              5589 16 +     19060 TTTGCCT--------A-------C-----AGA---AA-AT
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 13731 16 -     22811 TTTGCCC--------A-------T-----GCA---AA-AC
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2597123 16 -   4620579 GTTGCCC--------A-------C-----ACA---CA-AC
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     991109 16 +   2598838 TTTGCCC--------A-------C-----ACA---AA-AC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29421 16 +     38485 TTTGCCC--------A-------C-----ACA---AA-AC
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1464 16 -     13098 TTTGCCC--------A-------C-----ACA---AA-AC
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26942 16 +     35766 TTTGCCC--------A-------C-----ACA---AA-AC
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           5129 16 -     24134 TTTGCCC--------A-------C-----ACA---AA-AC
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28954 16 -     67325 TTTGCCC--------A-------C-----ACA---AA-AC
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           5177 16 -      6182 TTTGCCC--------A-------C-----ACA---AA-AC
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            10756 25 -     21651 tttgc-c----cccTG-------CCTCC-ACAT-CAC-aa
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            15464 16 -     21811 GTTGCTC--------A-------C-----ACA---AA-AC
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40623 16 +     42204 TTTGCCC--------A-------T-----ATA---AA-AT
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22977174 16 +  28871421 TTTGCCC--------A-------C-----ACA---AA-AT
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                7227 16 -      8028 TTTGCCC--------A-------C-----ACA---AA-AT
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20274698 15 -  38429054 TTTACC---------A-------C-----CAA---GA-AC
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15575 16 -     91421 TTTGCCT--------A-------C-----AGA---AA-AT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7609695 16 +   7812017 TTTGCCT--------A-------C-----AGA---AA-AT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             15574 16 -     72585 TTTGCCT--------A-------C-----AGA---AA-AT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53570978 26 +  90668790 tttgtca-cTCC---A-------TCCCC-AAC-ATAC-CA
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             7285 16 -     11128 TTTGCCT--------A-------C-----AGA---AA-AT
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236634 16 - 195417433 TTTGCCT--------A-------C-----AGA---AA-AT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672290 16 +   7961872 TTTGCCT--------A-------C-----AGA---AA-AT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88193 16 -     96226 TTTGCCC--------A-------C-----ACA---AA-AT
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_8081                                   737 16 +     42994 TTTGCCT--------A-------C-----ACA---AA-AT
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_57697                                522 16 +      1030 TTTGCCT--------A-------C-----ACA---AA-AT
i Saguinus_imperator.k141_57697                          C 0 C 0
s Saguinus_inustus.k141_3945547                                601 16 -      8737 TTTGCCT--------A-------C-----ACA---AA-AT
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_midas.LG03                                    209470088 16 + 209938924 TTTGCCT--------A-------C-----ACA---AA-AT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 8723 16 -      9399 TTTGCCT--------A-------C-----ACA---AA-AT
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951457 16 - 121099817 TTCGCCT--------A-------C-----ACA---GA-AT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23799 16 +     46362 TTCGCCT--------A-------C-----ACA---GA-AT
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               23894 16 +     45824 TTCGCCT--------A-------C-----ACA---GA-AT
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             40573 16 -     64574 TTCGCCT--------A-------C-----ACA---GA-AT
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               3646 16 -     23631 TTCGCCT--------A-------C-----ACA---GA-AT
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 23790 16 -     61129 TTCGCCT--------A-------C-----ACA---GA-AT
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5421163 16 -   5703754 GTTGCCT--------A-------C-----ACA---AA-AT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          56404 16 -     80660 GTTGCCT--------A-------C-----ACA---AA-AT
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153575 16 -    313613 TCAACCC--------A-------C-----ACA---AA-AT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                          466 16 -     12572 TTTGCCT--------A-------C-----AGA---AA-AT
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27316 16 +     39453 TTTGCCT--------A-------C-----AGA---AA-AT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            7834 16 +     27826 TTTGCCT--------A-------C-----AGA---AA-AT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             7356 16 -     19483 TTTGCCT--------A-------C-----AGA---AA-AT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                       657 16 -     12762 TTTGCCT--------A-------C-----AGA---AA-AT
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                            518 16 +     13763 TTTGCCT--------A-------C-----AGA---AA-AT
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                      664 21 -     30804 TTTGCTCTAAC----A-------C-----ACA-A-AA-AG
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               4163 16 +   1910179 TTGGTCC--------A-------T-----ACA---CA-AG
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13651395 21 -  18376816 ATGGTCC--------ACCTGAAAC-----AGG---CT---
i Sorex_araneus.JH798187.1                               C 0 I 10
s Spermophilus_dauricus.KZ294078.1                         1954323 16 -   3870691 tttgcct--------a-------c-----ACA---AA-Ac
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             31119 16 +     97271 TTTGCCC--------A-------C-----ACG---AA-AC
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              18714 16 -    196729 TTTACCC--------A-------C-----ATA---AA-AC
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6811196 16 +  69701581 TTTGCTC--------A-------C-----ATA---AA-AT
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                11203 16 +     41958 TTTGCCC--------A-------C-----ACA---TA-AC
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73000 16 +    116680 TTTGCTC--------A-------T-----ACA---AA-AC
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      119176 16 -    156842 TTTGCCT--------A-------C-----ACA---AA-AT
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387621 16 +    539355 TGTGCCT--------C-------C-----ACG---AT-AT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               26859 16 +     70052 TTTACCC--------A-------C-----ACA---AA-AC
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1656 16 -     16117 TTTACCC--------A-------C-----ACA---AA-AC
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186429005 16 + 186847797 CTTGCCT--------A-------C-----AGA---AA-AT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105816 16 +    114563 TTTTCCC--------A-------C-----ATA---AA-AT
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   6790 16 +      8208 TTTGCCC--------A-------C-----ACA---A-AAC
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81584 16 +    610378 TTTTTTC--------A-------C-----ACA---AA-AT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         11407 16 -     20410 TTTGCCT--------A-------C-----AGA---AA-AT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                       521 16 -     12674 TTTGCCT--------A-------C-----AGA---AA-AT
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       11508 16 +     19930 TTTGCCT--------A-------C-----AGA---AA-AT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       7919 16 -     19997 TTTGCCT--------A-------C-----AGA---AA-AT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48058 16 -     60166 TTTGCCT--------A-------C-----AGA---AA-AT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        15530 16 -     27529 TTTGCCT--------A-------C-----AGA---AA-AT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     15474 16 -     18194 TTTGCCT--------A-------C-----AGA---AA-AT
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9186 16 -     21137 TTTGCCT--------A-------C-----AGA---AA-AT
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    7889 16 -     10723 TTTGCCT--------A-------C-----AGA---AA-AT
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7061 16 +      9834 TTTGCCT--------A-------C-----AGA---AA-AT
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        25374 16 +     32220 TTTGCCT--------A-------C-----AGA---AA-AT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5939476 16 +   6242583 TTTGCCT--------A-------C-----AGA---AA-AT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        8727 16 +     20839 TTTGCCT--------A-------C-----AGA---AA-AT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4293633 16 +  10818551 TTTGCCC--------A-------T-----GCA---AA-AC
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2156193 16 +   4065304 TTTGCCA--------A-------C-----ACA---AA-AC
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9636 16 -     10553 TTTGCCA--------A-------C-----ACA---AA-AC
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   53679 16 -     77625 TCAGCCC--------A-------C-----ACA---AA-AT
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4850827 16 -   5085361 tttgccc--------A-------C-----ATA---AA-Ac
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  11788 16 +     50397 TTTGCCC--------A-------C-----ACA---CA-AC
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11847 16 +     24756 TTTGCCC--------A-------C-----ACA---CA-AC
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5372275 16 -   5488506 TTTGCCC--------A-------C-----ACA---AA-AC
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 11178 16 -     43706 TTTGCCC--------A-------C-----ATA---AA-AC
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          1447 16 +    224448 TTAGTCC--------T-------C-----ACA---AA-AC
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      15273 16 +     63895 TTTATCC--------A-------C-----ACA---AA-AC
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Echinops_telfairi.JH980293.1                            48781023  9 + 111700974 I
e Saguinus_labiatus.k141_285685                               8505  5 +      8564 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Microgale_talazaci.MicTal_scaffold_6613                    22729  9 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 50546  0 +     63868 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       7222 25 +     62944 A---G--ATC---------ATGTATTT-TCCTC-AA-AGC----------C------A
s Acinonyx_jubatus.LLWD01001279.1                           827706 25 -   1699592 A---G--ATC---------ATTCATTT-TCCTCAAA--AC----------C------A
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     71186 27 +     87051 A---A--A-------GATCATATATTT-TCCTC-AA-TAC----------C------C
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9510982 25 -  29979442 a---g--att---------attcattt-tcttcaaa--ac----------c------a
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             79754 25 -    347723 A---G--ATT---------ATTCGTTT-TCTTCAAA--AC----------C------A
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     74889 23 -     89534 A---G--A---T------CATTTATTT-TCCTA-AA-AAC------------------
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 1
s Allenopithecus_nigroviridis.k141_3361533                   15150 25 -     52922 A---G--ATC---------AGGTATTT-TCCTG-AA-AGC----------C------A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15066 25 -     28001 A---G--ATC---------AGGTATTT-TCCTG-AA-AGC----------C------A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          5564 25 -     18505 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           6416 25 -     12518 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              8011 25 +     51355 A---G--ATG---------ACATATTT-TTCTC-AA-AGC----------C------A
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                1120 25 -     36483 A---G--ATG---------ACATATTT-TTCTC-AA-AGC----------C------A
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              11569 25 +     28687 A---G--ATG---------ACATATTT-TTCTC-AA-AGC----------C------A
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                   85 25 +     27940 A---G--ATG---------ACATATTT-TTCTC-AA-AGC----------C------A
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            1130 25 -      9457 A---G--ATG---------ACATATTT-TTCTC-AA-AGC----------C------A
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                               85 25 +     30492 A---G--ATG---------ACATATTT-TTCTC-AA-AGC----------C------A
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              4080 25 +     47717 A---G--ATG---------ACATATTT-TTCTC-AA-AGC----------C------A
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                               812 25 +      5663 A---G--ATG---------ACATATTT-TTCTC-AA-AGC----------C------A
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             15264 25 +     50774 A---G--ATG---------ACATATTT-TTCTC-AA-AGC----------C------A
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185754 24 +    412891 A---G--ATC---------ATTCATT--TCCTC-AAA-AC----------C------T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  16011 25 -     33861 A---G--ATG---------ACATATTT-TTCTC-AA-AGC----------C------A
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            16057 25 -     34016 A---G--ATG---------ACATATTT-TTCTC-AA-AGC----------C------A
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4298435 25 -   5030052 A---G--ATG---------ACATATTT-TTCTC-AA-AGC----------C------A
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             16044 25 -     34685 A---G--ATG---------ACATATTT-TTCTC-AA-AGC----------C------A
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               29169 25 -     47192 A---G--ATG---------ACATATTT-TTCTC-AA-AGC----------C------A
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13005 25 +     20879 A---G--A---T------CATTTATTT-TCCTC-AA-ACC----------C------A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       11857 25 +     14667 A---G--GTC---------ATATATTT-TCCTT-AA-AAA----------C------A
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5144 24 +     43469 A---G--ATC---------ATTCATT--TCCTC-AAA-AC----------C------T
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  54091 25 -     92717 A---G--ACC---------ATTTATTT-TCCTC-AA-AGC----------C------A
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54712 25 +     85213 A---G--ATC---------ATTTATTT-TCCTC-AA-AGC----------C------A
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             5858 25 -     10423 A---G--ATG---------ACATATTT-TCCTC-AA-AGC----------C------C
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             25327 25 +     31915 A---G--ATG---------ACATATTT-TTCTC-AA-AGC----------C------A
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23591012 25 - 189096842 A---G--ATG---------ACATATTT-TCCTC-AA-AGC----------C------C
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                               411 25 -     12329 A---G--ATG---------ACATATTT-TCCTC-AA-AGC----------C------C
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002758 25 -  17673402 A---G--ATT---------GTGCCTGT-TCCTT-AAA-AC----------C------A
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2335234 25 -   7040546 A---G--ATT---------GTGCCTGT-TCCTT-AAA-AC----------C------A
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  403531 25 -   1652518 A---G--ATT---------GTGCCTGT-TCCTT-AAA-AC----------C------A
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17799571 25 -  60362399 A---G--ATT---------ATTTGTTT-GCCTCAAA--AC----------C------A
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                      319 25 -     43241 A---G--ATT---------ATTTGTTT-GCCTCAAA--AC----------C------A
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9035014 25 -   9314153 A---G--ATT---------ATTTGTTT-GCCTCAAA--AC----------C------A
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17959490 25 -  59632846 A---G--ATT---------ATTTGTTT-GCCTCAAA--AC----------C------A
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18500791 21 +  63665305 A---G--ATT-------------GTTT-GCCTCAAA--AC----------C------A
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1441 25 -     12242 T---G--A---T------CACTTATTT-TCCTC-AA-AAC----------T------A
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           156384 25 -    496798 A---G--ATC---------GTGTATTT-TCCTC-AA-AAC----------C------A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5509 24 -     11696 A---G--ATC---------ATTCATT--TCCTC-AAA-AC----------C------T
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137476 25 +    179628 A---ACTC-----------ATTCATTT-TCCTA-AA-AAT----------T------A
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     93465 25 +    217609 A---G--ATT---------GTGCATGT-CCCTC-AAA-AC----------A------A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                         10493 25 -     11392 A---G--ATG---------ACATATTT-TCCTC-AA-AGC----------C------C
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               6560 25 -      7577 A---G--ATG---------ACATATTT-TCCTC-AA-AGC----------C------C
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25653225 25 +  26074798 A---G--ATG---------ACGTGTTT-TTCTC-AA-AGC----------C------A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                1163 25 +     28840 A---G--ATG---------ACGTGTTT-TTCTC-AA-AGC----------C------A
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                  888 25 +     14051 A---G--ATG---------ACGTGTTT-TTCTC-AA-AGC----------C------A
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         5882 25 +     31688 A---G--ATC---------GTGTATTT-TCCTC-AA-AAC----------C------A
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12231853 24 +  27778364 A---G--ATC---------CTTCATTT-CTTCA-AA--AC----------C------A
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2880 24 -     25243 A---G--ATC---------CTTCATTT-CTTCA-AA--AC----------C------A
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4476081 25 +   4669795 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                         585 25 +     17872 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           1242 25 -     14043 A---G--ATC---------AGGCATTT-TCCTC-AA-AGC----------C------A
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9275 25 +     27781 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         9441 25 -     20310 A---G--ATC---------AGGTATTT-TCCTG-AA-AGC----------C------A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          12421 25 +     29689 A---G--ATC---------AGGTATTT-TCCTG-AA-AGC----------C------A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7171 25 -     20078 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          15089 25 -     27936 A---G--ATC---------AGGTATTT-TCCTC-AA-AGT----------C------A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            3959 25 -     17152 A---G--ATC---------AGGTATTT-TCCTC-AA-AGT----------C------A
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38817500 25 +  39242232 A---G--ATC---------AGGTATTT-TCCTG-AA-AGC----------C------A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223190 25 -  21565898 A---G--ATC---------AGGTATTT-TCCTC-AA-AGT----------C------A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40308 25 -     53127 A---G--ATC---------AGGTATTT-TCCTC-AA-AGT----------C------A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                         559 25 +     13442 A---G--ATC---------AGGTATTT-TCCTG-AA-AGC----------C------A
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15108 25 -     27947 A---G--ATC---------AGGTATTT-TCCTC-AA-AGT----------C------A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         15084 25 +     17596 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          1131 25 +     14005 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             928 25 -      8501 A---A--ATC---------CTTTATTT-CCTTC-AA-AAC----------C------A
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             21461 25 -     52598 A---G--ATC---------ATTTATTT-TCCTC-AA-AGC----------C------A
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16826 25 +     57038 A---G--ATC---------ATTTATTT-TCCTC-AA-AGC----------C------A
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1253208 25 +   2543920 A---g--a---------tcatttattt-tcctc-aa-aat----------c------a
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2206961                            759 25 -     15524 A---G--ATG---------ACGTATTT-TTCTC-AA-AGC----------C------A
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18429068 25 -  18827391 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15505 25 -     50209 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422505 25 + 135778131 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 18705 25 +     19366 A---A--ATC---------CTTTATTT-CCCTC-AA-AAC----------T------A
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            173782 25 +    839153 A---A--ATC---------CTTTATTT-CCCTC-AA-AAC----------T------A
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1911018 25 +   2368649 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949270 25 + 200372422 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37552 25 +     84244 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17548472 27 -  53390261 a---g--gtc-------acattttttt-tctgc-aaa-ac----------c------A
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14806 25 -     20389 A---G--ATT---------ATTCATTT-TCCTC-AAA-AC----------C------A
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetulus_griseus.LT883664.1                           11667947 26 + 224834208 a---a--a-------gattatttcttt-tcctt--g-tat----------C------A
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               3393 13 -     19598 ---------------------------------------GTTACTCAAACC------A
i Crocidura_indochinensis.CroInd_scaffold_37019          I 10 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28893 25 -     87169 A---C--ATC---------ATTAATTT-TCTTCAAA--AT----------C------A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837479 23 +   1526836 A---G--A-----------CTTTATTT-TCCTC-AA-AAC----------C------A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  36329 25 +     51376 A---G--A---T------CACTTATTT-TCCTC-AA-AAT----------C------A
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            63934 13 +   2246927 --------------------------t-ccttC-AA-AAC----------C------G
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537683 25 -  12879189 A---G--ATC---------ATTTATTT-TCATC-AA-AGC----------C------A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630525 24 +  20541912 A---G--ATC---------ATTCATT--TCCTC-AAA-AC----------C------T
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673702 24 +   1390856 A---G--ATC---------CTTCATTT-CTTCA-AA--AC----------C------A
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6453 24 +    198055 A---G--ATC---------CTTCATTT-CTTCA-AA--AC----------C------A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36792 25 +     67921 A---G--A---T------CATTTATTC-TCCTC-TA-AAC----------C------A
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Eidolon_helvum.KE759718.1                                  10931 25 +     11740 A---G--ATC---------ATTCACTT-TCCCT-AAA-AT----------C------G
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1098175 18 +  10337057 a---a--aa-------------cattg-CTGTC-AA-AA-------------------
i Elephantulus_edwardii.JH947257.1                       I 39 I 5
s Ellobius_lutescens.LOEQ01008920.1                          20669 26 -    110024 G---A--A-------GATCAATTTCT--CCCTT-GA-TAT----------C------G
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                             800 26 +      8657 G---A--A-------GATCAATTTCT--CCCTT-GA-TAT----------C------G
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16329710 25 -  41312741 A---G--att---------actcattt-tctttaaa--ac----------c------a
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2146133 25 -  14770903 A---G--GTC---------ATTCATTT-TCCTC-AAA-AC----------C------A
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1283961 24 +   4378816 A---G--ATC---------GTTCATTT-CTTTG-AA--AC----------C------A
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18531781 24 -  39960074 A---G--ATC---------GTTCATTT-CTTTG-AA--AC----------C------A
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               33810 24 +    498745 A---G--ATC---------GTTCATTT-CTTTG-AA--AC----------C------A
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3328603 24 -   7059049 T---G--ATC---------ATTTGCTT-CCCTC-AA--AC----------C------A
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21205673 25 -  21539334 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_576796                              40506 25 -     44621 A---G--ATC---------ATTTATTT-TCCTC-AA-AGC----------C------A
i Eulemur_albifrons.k141_576796                          C 0 C 0
s Eulemur_collaris.k141_377015                                6887 25 -     16928 A---G--ATC---------ATTTATTT-TCCTC-AA-AGC----------C------A
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15919 25 -     25546 A---G--ATC---------ATTTATTT-TCCTC-AA-AGC----------C------A
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            13115 25 +     26330 A---G--ATC---------ATTTATTT-TCCTC-AA-AGC----------C------A
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14350 25 +     23973 A---G--ATC---------ATTTATTT-TCCTC-AA-AGC----------C------A
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                13112 25 +     75513 A---G--ATC---------ATTTATTT-TCCTC-AA-AGC----------C------A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 11042 25 +     97555 A---G--ATC---------ATTTATTT-TCCTC-AA-AGT----------C------A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              533 25 +     13026 A---G--ATC---------ATTTATTT-TCCTC-AA-AGC----------C------A
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4586 25 -     17153 A---G--ATC---------ATTTATTT-TCCTC-AA-AGC----------C------A
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              14159 25 +    111500 A---G--ATC---------ATTTATTT-TCCTC-AA-AGC----------C------A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237348 25 + 206538554 A---G--ATC---------ATTCATTT-TCCTCAAA--AC----------C------A
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20196191 25 + 205367284 A---G--ATC---------ATTCATTT-TCCTCAAA--AC----------C------A
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  9944 25 -     36744 A---G--ATC---------ATTCATTT-TCCTCAAA--AC----------C------A
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             850835 18 +   3816255 ---------------------TTATTC-TCCTC-AA-AAC----------A------A
i Fukomys_damarensis.KN121974.1                          I 1 C 0
s Galago_moholi.ctg2040                                     427005 25 -    453645 A---G--TTC---------ATTTATTT-TCCTC-AA-AGA----------C------A
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4695 25 +     11339 A---G--TTC---------ATTTGTTT-TCCTC-AA-AGA----------C------A
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            1993 25 +     41679 A---G--GTC---------ATTTATTT-TCCTC-AA-AGA----------C------A
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1592 25 -      9135 A---G--ATC---------GTTTATTT-TCCTC-AA-AAC----------C------A
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            31756 32 +     49224 C---A--A--CTTTTTATTTTTTATTT-TCCTC-AA-AAC----------C------A
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              16477 25 -     32273 A---G--ATC---------ATGTATTT-TCCTC-AA-AGC----------C------A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186338613 25 + 186649187 A---G--ATC---------ATGTATTT-TCCTC-AA-AGC----------C------A
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33004 25 +     78134 A---G--A---T------CATTTATTT-TCCTC-AA-AAC----------C------A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           7218 25 -     19426 A---G--ATC---------ATTTATTT-TCCTC-AA-AGC----------C------A
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12367 25 -     15286 A---G--ATC---------ATTTATTT-TCCTC-AA-AGC----------C------A
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             14006 25 +     18253 A---G--ATC---------ATTTATTT-TCCTC-AA-AGC----------C------A
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         14107 25 -     41752 A---G--ATC---------ATTTATTT-TCCTC-AA-AGC----------C------A
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13944 25 -     16460 A---G--ATC---------ATTTATTT-TCCTC-AA-AGC----------C------A
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242727 25 +    327341 A---C--ATC---------ATTCATTT-TCCTCAAA--AT----------C------A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20662585 25 +  22651954 A---g--a---------tcatttattt-tcctc-aa-aac----------a------a
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1292 23 +      7595 A---A--AT-------------AACTG-CCCTT-AA-AAC----------T--A--AT
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hoolock_leuconedys.ctg274                                    435273 25 +    630532 A---G--ATC---------ACGTATTT-TCCTC-AA-AGC----------C------A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45420 25 +     55795 A---G--AGT---------ACTCATTT-TCCTCAAA--AC----------C------A
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83493 21 +    135385 A---C--A-----------CGTCATTT---CTC-AA-AAC----------C------A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7521284 25 -   7955117 A---G--A---T------CATTTATTT-TCCCT-CT-aac----------c------a
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   22904 25 +     31101 A---G--ATC---------ATTTATTA-TCCTC-AA-AGC----------C------A
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8277191 22 -   9596543 A---G--A---T------CACTTATTT-TCCTG-AA-AA-------------------
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_50988                    15565 25 +     29960 A---G--GTC---------ATTCATTT-TCCTC-AAA-AC----------C------A
i Lasiurus_borealis.LasBor_scaffold_50988                I 17 C 0
s Lemur_catta.scaffold_24                                 15524459 25 -  30322482 A---G--ATC---------ATTTATTT-TCCTC-AA-AGC----------C------A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        8137 25 +     64341 A---G--ATG---------ACATATTT-TTCTC-AA-AGC----------C------A
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                            477 25 -     35062 A---G--ATG---------ACATATTT-TTCTC-AA-AGC----------C------A
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        8165 25 +     35603 A---G--ATG---------ACATATTT-TTCTC-AA-AGC----------C------A
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    29579 25 +     38576 A---G--ATG---------ACATATTT-TTCTC-AA-AGC----------C------A
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         26279 25 +     66356 A---G--ATG---------ACATATTT-TTCTC-AA-AGC----------C------A
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         11351 25 -     23766 A---G--ATC---------ATTTATTT-TCCTC-AA-AGC----------C------A
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29412 25 +     45836 A---G--ATC---------ATTTATTT-TCCTC-AA-AGC----------C------A
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1950 25 +     25010 A---G--ATC---------ATTTATTT-TCCTC-AA-AGC----------C------A
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27348 25 +     54090 A---G--ATC---------ATTTATTT-TCCTC-AA-AGC----------C------A
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3043453 25 +   3914936 a---g--att---------attcattt-tcttcaaa--ac----------c------A
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6877 23 -     14121 A---G--ATC---------ATTTATTT-TCCTC-AC-AAC------------------
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 2
s Lophocebus_aterrimus.ctg367                              1437626 25 +   1826925 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            6253 25 +     11245 A---G--GTC---------ATTTATTT-TCCTC-AA-AGA----------C------A
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1005074 25 +   6120653 A---G--GTC---------ATTTATTT-TCCTC-AA-AGA----------C------A
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4217724 24 -  43346337 G---A--AT-------------CATTG-TCCTC-AAAAAC----------T--A--AT
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17955730 25 -  59628241 A---G--ATT---------ATTTGTTT-GCCTCAAA--AC----------C------A
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               7439 25 +     40492 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59676698 25 +  60120075 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13214 25 -     26193 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            80998 25 -    114318 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  6685 25 -     23192 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16158 25 -     29190 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  24723 25 +     37952 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186839812 25 + 187317192 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458375 25 -  25927173 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  80571 25 +     89720 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 7572 25 +     20474 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   7372 25 -     14993 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  330238 25 -    668171 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 5685 25 -     24072 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26310 25 -     45290 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91022 25 +     94391 A---G--ATC---------ATTTATTT-TCCTT-AAA-AT----------C------A
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23937901 25 -  24302211 A---G--ATC---------AGGCATTT-TCCTC-AA-AGC----------C------A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352025 25 +    752769 A---G--ATC---------AGGCATTT-TCCTC-AA-AGC----------C------A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              18914 25 +    737560 a---g--att---------gttcattt-tcttcaaa--aC----------C------A
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              50900 25 -    317179 a---g--att---------gttcattt-tcttcaaa--aa----------c------a
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33103482 25 -  40650429 a---g--a---------tcatttattt-tcctt-ct-aac----------c------a
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        10842 25 -    207569 A---G--ATT---------GTTCATTT-TCCTC-AAA-AC----------C------T
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10445 25 +     13704 C---G--ATT---------ACTCATTT-TCTTTAAA--AC----------C------A
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 33137 26 +    140813 A---A--A--GTT-----CATTTACTT-TT-CC-AA-TAT----------C------A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12182625  3 -  29670104 ---------------------------------------t----------c------A
i Mesocricetus_auratus.KB708134.1                        I 5 C 0
s Mico_argentatus.k141_1239457                                6372 25 -      7380 A---G--ATG---------ACATATTT-TCCTC-AA-AGC----------C------C
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_2457295                                601 25 +      1079 A---G--ATG---------ACATATTT-TCCTC-AA-AGC----------C------C
i Mico_humeralifer.k141_2457295                          C 0 C 0
s Mico_schneideri.k141_1950671                                      6384 25 -      7356 A---G--ATG---------ACATATTT-TCCTC-AA-AGC----------C------C
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18291885 25 -  93316391 A---g--atc---------atttattt-tcctc-aa-agc----------C------A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                16049 24 -     19307 A---G--ATC---------ATTCATC--TCCTC-AAA-AC----------C------T
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11260850 26 -  27267610 g---a--a-------gatcAATTTCT--CCCTT-GA-TAT----------C------G
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1851005 25 +   8254450 A---G--AGC---------ATGCACTT-TCCTC-AAA-AC----------C------A
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34686 25 +     64694 A---G--AGC---------ATGCACTT-TCCTC-AAA-AC----------C------A
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9607 25 -     28506 A---G--ATC---------AGGTATTT-TCCTG-AA-AGC----------C------A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6321 25 -      8324 A---G--ATT---------ATTCATTT-TCTTCAAA--AC----------C------A
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      9429 25 -     37649 A---G--ATC---------ATTTATTT-TCCTC-AA-AGC----------T------A
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142029 25 -    366855 A---G--ATC---------ATTTATTT-TCCTC-AAA-AC----------C------T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35827 25 +     37127 A---C--ATC---------ATTCATTT-TCCTCAAA--AT----------C------A
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           7228 25 +     14753 A---G--GTC---------ATTCATTT-TCCTC-AAA-AC----------C------A
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84361741 27 - 120012414 A---A--G-------GATCATTTATTT-TCCTC-AA-TGA----------C------A
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87650738 27 - 129401213 A---A--G-------GATCATTTATTT-TCCTC-AA-TGT----------C------A
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31355396 27 -  89631738 A---A--G-------GATCATTTATTT-TCCTC-AG-TAT----------C------A
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90752799 27 - 130317789 A---A--G-------GATCATTTATTT-TCCTC-AA-TGT----------C------A
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              5335 25 +     14296 A---G--A---T------CATTTATTT-TCCTC-AA-AAC----------C------A
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               301859 25 -  14710649 A---G--att---------actcattt-tctttaaa--ac----------c------a
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71642 25 -     80779 A---G--A---T------CACTTATTT-TCCTC-AA-AAC----------A------A
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                280872 25 -  10118263 A---G--GTC---------ATTCATTT-GCATC-AAA-AC----------C------A
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1588128 25 -   6019432 A---G--GTC---------ATTCATTT-TCCTC-AAA-AC----------C------A
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3904226 25 -   4330536 A---G--GTC---------ATTCATTT-TCCTC-AAA-AC----------C------A
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                         375 25 +      1835 A---G--GTC---------ATTCATTT-TCCTC-AAA-AC----------C------A
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189657 25 +    196477 A---A--ATC---------TTCTGTTT-CCCTC-AA-AAC----------C------A
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2034461 25 -   3037898 A---G--A---T------CATTTATTT-TCCTC-CA-AGC----------C------A
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               15609 25 +     21681 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20307907 25 +  31847680 a---g--att---------attcattt-tcttcaaa--ac----------c------A
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    758282 31 +    783361 A---G--ATC---------ATTCATTC-TCCTC-AAA-AT----------CTGAGGAA
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149798 21 -   9404916 A---G--ATT-------------GTTT-GCCTCAAA--AC----------C------A
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102586618 25 - 196305487 A---G--GTC---------ATTTATTT-TCCTC-AA-AGA----------C------A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              542 25 +      2075 A---G--GTC---------ATTTATTT-TCCTC-AA-AGA----------C------A
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761973 25 + 199412804 A---G--GTC---------ATTTATTT-TCCTC-AA-AGA----------C------A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1363935 25 +   3988456 A---G--ATC---------ATTTATTT-TCCTC-AC-AAC----------A------A
i Ochotona_princeps.JH802162.1                           C 0 I 325
s Octodon_degus.JH651603.1                                  747250 25 +  11899542 A---G--A---T------CACTTATGT-TCCTT-AA-AAC----------C------A
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                              507052 25 -   2017862 a---g--att---------attcattt-tcttcaaa--ac----------c------a
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   25518 26 +     28053 G---A--A-------GATCAATTTCT--CCCTT-GA-TAT----------T------G
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    80526 27 +    102263 A---A--A-------GATCATTTCTTT-TCCTC-AG-TTT----------C------A
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387              10508 18 -     18566 A---A--AT-------------TATTG-TTCTC-AA-AA-------------------
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 I 1
s Oryctolagus_cuniculus.CM000791.1                        67147737 23 + 174332312 A---G--ATC---------ATTTATTT-TCCTC-AC-AAC------------------
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 2
s Otocyon_megalotis.JAEUCK010005147.1                       462746 21 -    559221 A---G--ATT---------ATTTG-----CCTCAAA--AC----------C------A
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4525 25 +      8798 A---G--GTC---------ATTTATTT-TCCTC-AA-AGA----------C------A
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696688 25 -   1103335 A---G--gtc---------atttattt-tcctc-aa-aga----------C------A
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    44565 25 +     80009 A---G--ATC---------ATGTATTT-TCCTC-AA-AGC----------C------A
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189143466 25 + 189151597 A---G--ATC---------ATGTATTT-TCCTC-AA-AGC----------C------A
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  151557 25 +    230217 A---G--ATC---------ATTCATTT-TCCTCAAA--AC----------C------A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                264766 25 +  18783137 A---G--ATC---------ATTCATTT-TCCTCAAA--AC----------C------A
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4721645 25 -   8748460 A---G--ATC---------ATTCATTT-TCCTCAAA--AC----------C------A
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183443703 25 + 183742232 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7349 25 +     20448 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20564161 25 +  20919399 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6093 25 +     41871 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     9386 25 +     27711 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                   383 25 -     11374 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13057 25 -     78924 A---G--ATC---------ATTCATTT-TCCTCCAA--AC----------C------A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10501 25 +     13100 A---G--GTG---------ATATATTT-TCCTC-AA-AAA----------C------A
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8907 25 +     25941 A---G--GTG---------ATATATTT-TCCTC-AA-AAA----------C------A
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18195151 27 -  18517816 a---a--a-------gatcatttcttt-ttctc-aa-tat----------C------A
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28515 26 -     29689 A---G--A---T------CAATTACTG-TCCTCAAA-AAT----------A------A
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Piliocolobus_badius.k141_1234363                           44100 25 +     62158 A---G--ATC---------AGGTATTT-TCCTC-AA-AGG----------C------A
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        38847 25 +     89929 A---G--ATC---------AGGTATTT-TCCTC-AA-AGG----------C------A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40263 25 +     51399 A---G--ATC---------AGGTATTT-TCCTC-AA-AGG----------C------A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296501 25 -  14605196 A---G--ATC---------AGGTATTT-TCCTC-AA-AGG----------C------A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2167 25 +     22620 A---G--GTC---------ATTCATTT-TCCTC-CAA-AC----------C------A
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189131604 25 + 189387572 A---G--ATG---------ATGTATTT-TCCTC-AA-AGC----------C------A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9571211 25 +   9816681 A---G--ATG---------ATGTATTT-TCCTC-AA-AGC----------C------A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               73785 25 -     81375 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              5605 25 +     19060 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 13747 23 -     22811 A---A--AT-------------AACTG-CCCTT-AA-AAC----------T--A--AT
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2597139 25 -   4620579 A---G--atc---------atttattt-tcctc-aa-agC----------C------A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     991125 25 +   2598838 A---g--atc---------atttattt-tcctc-aa-aga----------C------A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29437 25 +     38485 A---G--ATC---------ATTTATTT-TCCTC-AA-AGA----------C------A
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1480 25 -     13098 A---G--ATC---------ATTTATTT-TCCTC-AA-AGA----------C------A
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26958 25 +     35766 A---G--ATC---------ATTTATTT-TCCTC-AA-AGA----------C------A
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           5145 25 -     24134 A---G--ATC---------ATTTATTT-TCCTC-AA-AGA----------C------A
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28970 25 -     67325 A---G--ATC---------ATTTATTT-TCCTC-AA-AGA----------C------A
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           5193 25 -      6182 A---G--ATC---------ATTTATTT-TCCTC-AA-AGA----------C------A
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            10781 27 -     21651 a---a--a-------gttcatttattt-tttcc-aa-tat----------C------A
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            15480 25 -     21811 A---G--AGC---------CTTCATTT-TCCTC-AAA-AC----------C------T
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40639 25 +     42204 A---G--ATT---------ACTCATTT-TCTTTAAA--AC----------C------A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22977190 10 +  28871421 A---G--ATC---------GTTCA----------------------------------
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                7243 10 -      8028 A---G--ATC---------GTTCA----------------------------------
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20274713 25 -  38429054 A---G--ATC---------ATTCATTT-TCCTCAAA--AC----------C------A
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15591 25 -     91421 A---G--ATC---------AGGTATTT-TCCTC-AA-AGT----------C------A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7609711 25 +   7812017 A---G--ATC---------AGGTATTT-TCCTC-AA-AGT----------C------A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             15590 25 -     72585 A---G--ATC---------AGGTATTT-TCCTC-AA-AGT----------C------A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53571004 27 +  90668790 G---A--A-------GAACACTTAGTT-CCCTC-AA-TAT----------C------A
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             7301 25 -     11128 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236650 25 - 195417433 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672306 25 +   7961872 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88209 28 -     96226 AGAAG--ATC---------ATTCATTT-TCCTT-AAA-AT----------T------A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_8081                                   753 25 +     42994 A---G--ATG---------ACGTATTT-TTCTC-AA-AGC----------C------A
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_57697                                538 25 +      1030 A---G--ATG---------ACATATTT-TTCTC-AA-AGC----------C------A
i Saguinus_imperator.k141_57697                          C 0 C 0
s Saguinus_inustus.k141_3945547                                617 25 -      8737 A---G--ATG---------ACATATTT-TTCTC-AA-AGC----------C------A
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_midas.LG03                                    209470104 25 + 209938924 A---G--ATG---------ACATATTT-TTCTC-AA-AGC----------C------A
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 8739 25 -      9399 A---G--ATG---------ATATATTT-TTCTC-AA-AGC----------C------A
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951473 25 - 121099817 A---G--ATG---------ACAGGTTT-TTCTC-AA-AGC----------C------A
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23815 25 +     46362 A---G--ATG---------ACAGGTTT-TTCTC-AA-AGC----------C------A
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               23910 25 +     45824 A---G--ATG---------ACAGGTTT-TTCTC-AA-AGC----------C------A
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             40589 25 -     64574 A---G--ATG---------ACAGGTTT-TTCTC-AA-AGC----------C------A
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               3662 25 -     23631 A---G--ATG---------ACAGGTTT-TTCTC-AA-AGC----------C------A
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 23806 25 -     61129 A---G--ATG---------ACAGGTTT-TTCTC-AA-AGC----------C------A
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5421179 25 -   5703754 A---G--ATG---------ACATGTTT-TTCTC-AA-AGC----------C------A
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          56420 25 -     80660 A---G--ATG---------ACATGTTT-TTCTC-AA-AGC----------C------A
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153591 25 -    313613 A---G--GTC---------ATTTGTTT-TCTGC-AAA-AT----------C------A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                          482 25 -     12572 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27332 25 +     39453 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            7850 25 +     27826 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             7372 25 -     19483 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                       673 25 -     12762 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                            534 25 +     13763 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                      685 26 -     30804 A---A--A-------GACCATTTTTTT-T-CTC-AA-TAT----------C------A
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Sorex_araneus.JH798187.1                                13651426 13 -  18376816 ---------------------------------------TTTACTCAAACA------A
i Sorex_araneus.JH798187.1                               I 10 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               4179  8 +   1910179 C---G--GT------------TTGT---------------------------------
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 3
s Spermophilus_dauricus.KZ294078.1                         1954339 25 -   3870691 a---g--a---------tcatttattt-tcctt-ct-aac----------c------a
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             31135 22 +     97271 A---G--ATT---------ATTCAT----CTTCAAA--AC----------C------A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              18730 25 -    196729 A---C--ATC---------ATTCATTT-TCCTCAAA--AT----------C------A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6811212 25 +  69701581 A---G--ATT---------GTGCATGT-TGctc-aaa-ac----------a------a
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                11219 25 +     41958 A---G--ATC---------ATTCCTTT-CCCTC-ACA-AC----------C------A
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73016 25 +    116680 A---A--ATC---------CTTTGTTT-CCCTT-AA-AAC----------C------A
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      119192 25 -    156842 A---G--ATC---------ATTCATTTGGTTCA-AA--AC----------C------A
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387637 25 +    539355 A---G--ATC---------GTTCATTTGGTTCA-AA--AC----------C------A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               26875 25 +     70052 A---G--ATC---------ATGTATTT-TCCTC-AA-AGC----------C------A
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1672 25 -     16117 A---G--ATC---------ATGTATTT-TCCTC-AA-AGC----------C------A
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186429021 25 + 186847797 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105832 26 +    114563 A---G--A---T------CAATTGTTT-TCTTCCAA-AAC----------A------A
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   6806 25 +      8208 A---A--ATC---------CTTTATTT-CCCCC-AA-AAC----------C------A
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81600 24 +    610378 G---G--ATC---------ATTCATT--TCCTC-AAA-AC----------C------T
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         11423 25 -     20410 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                       537 25 -     12674 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       11524 25 +     19930 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       7935 25 -     19997 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48074 25 -     60166 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        15546 25 -     27529 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     15490 25 -     18194 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9202 25 -     21137 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    7905 25 -     10723 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7077 25 +      9834 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        25390 25 +     32220 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5939492 25 +   6242583 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        8743 25 +     20839 A---G--ATC---------AGGTATTT-TCCTC-AA-AGC----------C------A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4293649 23 +  10818551 A---A--AT-------------TATTG-CCCTC-AA-AAG----------T-GA---T
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2156209 25 +   4065304 A---G--ATC---------ATTTATTT-TGCTT-GA-GAT----------C------A
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9652 25 -     10553 A---G--ATC---------ATTTATTT-TGCTT-GA-GAT----------C------A
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   53695 25 -     77625 A---G--GTC---------ATTTGTTT-TCCAC-AAA-AT----------C------A
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4850843 25 -   5085361 a---g--att---------attcattt-tcttcaaa--ac----------c------a
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  11804 25 +     50397 A---G--ATC---------ATTTATTT-TCCTC-AA-AGC----------C------A
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11863 25 +     24756 A---G--ATC---------ATTTATTT-TCCTC-AA-AGC----------C------A
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5372291 25 -   5488506 A---G--ATT---------GTGCCTGT-TCCTC-AAA-AC----------C------A
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 11194 25 -     43706 A---G--ATT---------ATTTGTTT-GCCTCAAA--AC----------C------A
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          1463 25 +    224448 A---G--A---T------CATTTATTT-TCCCC-AA-AAC----------C------A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      15289 23 +     63895 A---G--A---T------CATTTATTT-TCCTG-AA-AAC------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 1
e Echinops_telfairi.JH980293.1                            48781023  9 + 111700974 I
e Saguinus_labiatus.k141_285685                               8505  5 +      8564 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Microgale_talazaci.MicTal_scaffold_6613                    22729  9 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 50546  0 +     63868 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       7247 6 +     62944 AA--GTTC
s Acinonyx_jubatus.LLWD01001279.1                           827731 6 -   1699592 AG--TTTC
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     71213 6 +     87051 AC--TTTC
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511007 6 -  29979442 AC--TTTC
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             79779 6 -    347723 AC--TTTC
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     74913 6 -     89534 AA--CTTT
i Allactaga_bullata.AllBul_scaffold_9566                 I 1 C 0
s Allenopithecus_nigroviridis.k141_3361533                   15175 6 -     52922 AA--GTTC
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15091 6 -     28001 AA--GTTC
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          5589 6 -     18505 AA--GTTC
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           6441 6 -     12518 AA--GTTC
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              8036 6 +     51355 AA--GTTC
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                1145 6 -     36483 AA--GTTC
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              11594 6 +     28687 AA--GTTC
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                  110 6 +     27940 AA--GTTC
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            1155 6 -      9457 AA--GTTC
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                              110 6 +     30492 AA--GTTC
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              4105 6 +     47717 AA--GTTC
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                               837 6 +      5663 AA--GTTC
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             15289 6 +     50774 AA--GTTC
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185778 6 +    412891 GC--TTTC
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  16036 6 -     33861 AA--GTTC
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            16082 6 -     34016 AA--GTTC
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4298460 6 -   5030052 AA--GTTC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             16069 6 -     34685 AA--GTTC
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               29194 6 -     47192 AA--GTTC
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13030 6 +     20879 AC--TTTT
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       11882 6 +     14667 AG--TTTT
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5168 6 +     43469 GC--TTTC
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  54116 6 -     92717 AG--TTTC
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54737 6 +     85213 AG--TTTC
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             5883 6 -     10423 AA--GTTC
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             25352 6 +     31915 AA--GTTC
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23591037 6 - 189096842 AA--GTTC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                               436 6 -     12329 AA--GTTC
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002783 6 -  17673402 AC--TTTC
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2335259 6 -   7040546 AC--TTTC
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  403556 6 -   1652518 AC--TTTC
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17799596 6 -  60362399 AC--TTTC
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                      344 6 -     43241 AC--TTTC
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9035039 6 -   9314153 AC--TTTC
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17959515 6 -  59632846 AC--TTTC
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18500812 6 +  63665305 AC--TTTC
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1466 6 -     12242 AA--TTTC
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           156409 6 -    496798 GC--TTTC
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5533 6 -     11696 GC--TTTC
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137501 8 +    179628 AAACTTTT
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     93490 6 +    217609 AT--TTTT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                         10518 6 -     11392 AA--GTTC
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               6585 6 -      7577 AA--GTTC
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25653250 6 +  26074798 AA--GTCC
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                1188 6 +     28840 AA--GTCC
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                  913 6 +     14051 AA--GTCC
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         5907 6 +     31688 GC--TTTC
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12231877 6 +  27778364 AC--TTTC
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2904 6 -     25243 AC--TTTC
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4476106 6 +   4669795 AA--GTTC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                         610 6 +     17872 AA--GTTC
i Cercocebus_chrysogaster.k141_1540778                   C 0 I 9
s Cercocebus_lunulatus.k141_3342297                           1267 6 -     14043 AA--GTTC
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9300 6 +     27781 AA--GTTC
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         9466 6 -     20310 AA--GTTC
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          12446 6 +     29689 AA--GTTC
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7196 6 -     20078 AA--GTTC
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          15114 6 -     27936 AA--GTTC
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            3984 6 -     17152 AA--GTTC
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38817525 6 +  39242232 AA--GTTC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223215 6 -  21565898 AA--GTTC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40333 6 -     53127 AA--GTTC
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                         584 6 +     13442 AA--GTTC
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15133 6 -     27947 AA--GTTC
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         15109 6 +     17596 AA--GTTC
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          1156 6 +     14005 AA--GTTC
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             953 6 -      8501 AC--TTCC
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 I 14
s Cheirogaleus_major.k141_333249                             21486 6 -     52598 AG--TTTC
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16851 6 +     57038 AG--TTTC
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1253233 6 +   2543920 aa--tttc
i Chinchilla_lanigera.JH722012.1                         C 0 I 97
s Chiropotes_albinasus.k141_2206961                            784 6 -     15524 AA--GTTC
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18429093 6 -  18827391 AA--GTTC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15530 6 -     50209 AA--GTTC
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422530 6 + 135778131 AA--GTTC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 18730 6 +     19366 AC--TTCC
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            173807 6 +    839153 AC--TTCC
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1911043 6 +   2368649 AA--GTTC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949295 6 + 200372422 AA--GTTC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37577 6 +     84244 AA--GTTC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17548499 5 -  53390261 -C--ACTC
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14831 6 -     20389 AC--TTTC
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetulus_griseus.LT883664.1                           11667973 6 + 224834208 AC--TTTC
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               3406 6 -     19598 CT--TTTC
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28918 6 -     87169 AC--TTTC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837502 5 +   1526836 AA--TTT-
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  36354 6 +     51376 GA--TTTC
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            63947 6 +   2246927 AC--TTCC
i Dasypus_novemcinctus.JH564415.1                        C 0 I 15
s Daubentonia_madagascariensis.ctg71                      12537708 6 -  12879189 AG--TTTC
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630549 6 +  20541912 AC--TTTC
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673726 6 +   1390856 AC--TTTC
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6477 6 +    198055 AC--TTTC
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36817 6 +     67921 AA--TTTC
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Eidolon_helvum.KE759718.1                                  10956 6 +     11740 AT--TTTC
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1098198 4 +  10337057 AT----TT
i Elephantulus_edwardii.JH947257.1                       I 5 C 0
s Ellobius_lutescens.LOEQ01008920.1                          20695 6 -    110024 ac--tttc
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                             826 6 +      8657 AC--TTTC
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16329735 6 -  41312741 aG--TTTC
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2146158 6 -  14770903 AC--TTTC
i Eptesicus_fuscus.JH977646.1                            C 0 I 10
s Equus_asinus.JREZ01000139.1                              1283985 6 +   4378816 AC--TTTC
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18531805 6 -  39960074 AC--TTTC
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               33834 6 +    498745 AC--TTTC
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3328627 6 -   7059049 AC--TTTC
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21205698 6 -  21539334 AA--GTTC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_576796                              40531 6 -     44621 AG--TTTC
i Eulemur_albifrons.k141_576796                          C 0 C 0
s Eulemur_collaris.k141_377015                                6912 6 -     16928 AG--TTTC
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15944 6 -     25546 AG--TTTC
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            13140 6 +     26330 AG--TTTC
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14375 6 +     23973 AG--TTTC
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                13137 6 +     75513 AG--TTTC
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 11067 6 +     97555 AG--TTTC
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              558 6 +     13026 AG--TTTC
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4611 6 -     17153 AG--TTTC
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              14184 6 +    111500 AG--TTTC
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237373 6 + 206538554 AG--TTTC
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20196216 6 + 205367284 AG--TTTC
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  9969 6 -     36744 AG--TTTC
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             850853 6 +   3816255 AT--TTTG
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg2040                                     427030 6 -    453645 AG--TTTT
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4720 6 +     11339 AG--TTTT
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            2018 6 +     41679 AG--TTTT
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1617 6 -      9135 AC--TTTC
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            31788 6 +     49224 AC--TTTT
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              16502 6 -     32273 AA--GTTC
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186338638 6 + 186649187 AA--GTTC
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33029 6 +     78134 AC--TTTT
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           7243 6 -     19426 AG--TTTC
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12392 6 -     15286 AG--TTTC
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             14031 6 +     18253 AG--TTTC
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         14132 6 -     41752 AG--TTTC
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13969 6 -     16460 AG--TTTC
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242752 6 +    327341 AC--TTTC
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20662610 6 +  22651954 at--tttc
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1315 4 +      7595 GT----TT
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hoolock_leuconedys.ctg274                                    435298 6 +    630532 AA--GTTC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45445 6 +     55795 AC--TTTC
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83514 6 +    135385 AC--TTTC
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7521309 6 -   7955117 ac--tttt
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   22929 6 +     31101 AG--TTTC
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8277213 6 -   9596543 GA--CTTT
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_50988                    15590 6 +     29960 CC--TTTC
i Lasiurus_borealis.LasBor_scaffold_50988                C 0 I 246
s Lemur_catta.scaffold_24                                 15524484 6 -  30322482 AG--TTTC
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        8162 6 +     64341 AA--GTTC
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                            502 6 -     35062 AA--GTTC
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        8190 6 +     35603 AA--GTTC
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    29604 6 +     38576 AA--GTTC
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         26304 6 +     66356 AA--GTTC
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         11376 6 -     23766 AG--TTCC
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29437 6 +     45836 AG--TTCC
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1975 6 +     25010 AG--TTCC
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27373 6 +     54090 AG--TTCC
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3043478 6 +   3914936 AC--TTTC
i Leptonychotes_weddellii.KB714746.1                     C 0 I 41
s Lepus_americanus.LepAme_scaffold_107385                     6902 5 -     14121 -A--TTTC
i Lepus_americanus.LepAme_scaffold_107385                I 2 C 0
s Lophocebus_aterrimus.ctg367                              1437651 6 +   1826925 AA--GTTC
i Lophocebus_aterrimus.ctg367                            C 0 I 9
s Loris_lydekkerianus.k141_2539221                            6278 6 +     11245 AG--TTTT
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1005099 6 +   6120653 AG--TTTT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4217748 4 -  43346337 GT----TT
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17955755 6 -  59628241 AC--TTTC
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               7464 6 +     40492 AA--GTTC
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59676723 6 +  60120075 AA--GTTC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13239 6 -     26193 AA--GTTC
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            81023 6 -    114318 AA--GTTC
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  6710 6 -     23192 AA--GTTC
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16183 6 -     29190 AA--GTTC
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  24748 6 +     37952 AA--GTTC
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186839837 6 + 187317192 AA--GTTC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458400 6 -  25927173 AA--GTTC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  80596 6 +     89720 AA--GTTC
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 7597 6 +     20474 AA--GTTC
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   7397 6 -     14993 AA--GTTC
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  330263 6 -    668171 AA--GTTC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 5710 6 -     24072 AA--GTTC
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26335 6 -     45290 AA--GTTC
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91047 6 +     94391 AT--TTTC
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23937926 6 -  24302211 AA--GTTC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352050 6 +    752769 AA--GTTC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              18939 6 +    737560 AC--TTTC
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              50925 6 -    317179 aC--TTTC
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33103507 6 -  40650429 ac--tttt
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        10867 6 -    207569 AC--TTTC
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10470 6 +     13704 AC--TTTC
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 33163 6 +    140813 AC--TTTC
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12182628 6 -  29670104 AC--TTTC
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                6397 6 -      7380 AA--GTTC
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_2457295                                626 6 +      1079 AA--GTTC
i Mico_humeralifer.k141_2457295                          C 0 C 0
s Mico_schneideri.k141_1950671                                      6409 6 -      7356 AA--GTTC
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18291910 6 -  93316391 AG--TTTC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                16073 6 -     19307 AC--TTTC
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11260876 6 -  27267610 AC--TTTC
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1851030 6 +   8254450 AC--TTTC
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34711 6 +     64694 AC--TTTC
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9632 6 -     28506 AA--GTTC
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6346 6 -      8324 AC--TTTC
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 6
s Mirza_zaza.k141_952172                                      9454 6 -     37649 AG--TTTC
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142054 6 -    366855 AC--TTTC
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35852 6 +     37127 AC--TTTC
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           7253 6 +     14753 AC--TTTC
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84361768 6 - 120012414 AC--TTTT
i Mus_caroli.LT608237.1                                  C 0 I 14
s Mus_musculus.chr8                                       87650765 6 - 129401213 AC--TTTT
i Mus_musculus.chr8                                      C 0 I 13
s Mus_pahari.LT608297.1                                   31355423 6 -  89631738 AC--TTTT
i Mus_pahari.LT608297.1                                  C 0 I 11
s Mus_spretus.CM004101.1                                  90752826 6 - 130317789 AC--TTTT
i Mus_spretus.CM004101.1                                 C 0 I 14
s Muscardinus_avellanarius.MusAve_scaffold_82313              5360 6 +     14296 AC--TTTT
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               301884 6 -  14710649 aC--TTTC
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71667 6 -     80779 AA--CTTC
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                280897 6 -  10118263 AC--TTTC
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1588153 6 -   6019432 AC--TTTC
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3904251 6 -   4330536 AC--TTTC
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                         400 6 +      1835 AC--TTTC
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189682 6 +    196477 AC--ATCC
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2034486 6 -   3037898 AC--TTTT
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               15634 6 +     21681 AA--GTTC
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20307932 6 +  31847680 AC--TTTC
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 6
s Noctilio_leporinus.NocLep_scaffold_251                    758313 6 +    783361 AC--TGTC
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149819 6 -   9404916 AC--TTTC
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102586643 6 - 196305487 AG--TTTT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              567 6 +      2075 AG--TTTT
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105761998 6 + 199412804 AG--TTTT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1364285 6 +   3988456 aa--tttc
i Ochotona_princeps.JH802162.1                           I 325 C 0
s Octodon_degus.JH651603.1                                  747275 6 +  11899542 GA--TTTC
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                              507077 6 -   2017862 AC--TTTC
i Odobenus_rosmarus.KB229312.1                           C 0 I 3
s Ondatra_zibethicus.OndZib_scaffold_46174                   25544 6 +     28053 AC--TTTC
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    80553 6 +    102263 AC--TTTC
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387              10527 4 -     18566 GT----TT
i Orycteropus_afer.OryAfe_flattened_line_144387          I 1 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147762 5 + 174332312 -A--TTTC
i Oryctolagus_cuniculus.CM000791.1                       I 2 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462767 6 -    559221 AC--TTTC
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4550 6 +      8798 AA--TTTT
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696713 6 -   1103335 AA--TTTT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    44590 6 +     80009 AA--GTTC
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189143491 6 + 189151597 AA--GTTC
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  151582 6 +    230217 AG--TTTC
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 12
s Panthera_pardus.KV860321.1                                264791 6 +  18783137 AG--TTTC
i Panthera_pardus.KV860321.1                             C 0 I 12
s Panthera_tigris.KE722367.1                               4721670 6 -   8748460 AG--TTTC
i Panthera_tigris.KE722367.1                             C 0 I 12
s Papio_anubis.CM001495.2                                183443728 6 + 183742232 AA--GTTC
i Papio_anubis.CM001495.2                                C 0 I 9
s Papio_cynocephalus.k141_4307930                             7374 6 +     20448 AA--GTTC
i Papio_cynocephalus.k141_4307930                        C 0 I 9
s Papio_hamadryas.Contig39                                20564186 6 +  20919399 AA--GTTC
i Papio_hamadryas.Contig39                               C 0 I 9
s Papio_kindae.k141_1936966                                   6118 6 +     41871 AA--GTTC
i Papio_kindae.k141_1936966                              C 0 I 9
s Papio_papio.k141_802527                                     9411 6 +     27711 AA--GTTC
i Papio_papio.k141_802527                                C 0 I 9
s Papio_ursinus.k141_5274964                                   408 6 -     11374 AA--GTTC
i Papio_ursinus.k141_5274964                             C 0 I 9
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13082 6 -     78924 AA--TTTC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10526 6 +     13100 AG--TTTT
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8932 6 +     25941 AG--TTTT
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18195178 6 -  18517816 AC--TTTC
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28541 6 -     29689 AT--TTTC
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Piliocolobus_badius.k141_1234363                           44125 6 +     62158 AA--GTTC
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        38872 6 +     89929 AA--GTTC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40288 6 +     51399 AA--GTTC
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296526 6 -  14605196 AA--GTTC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2192 6 +     22620 AC--TTTC
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 10
s Pongo_abelii.CM009266.2                                189131629 6 + 189387572 AA--GTTC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9571236 6 +   9816681 AA--GTTC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               73810 6 -     81375 AA--GTTC
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              5630 6 +     19060 AA--GTTC
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 13770 4 -     22811 GT----TT
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2597164 6 -   4620579 AG--TTTC
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     991150 6 +   2598838 AG--TTTC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29462 6 +     38485 AG--TTTC
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1505 6 -     13098 AG--TTTC
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26983 6 +     35766 AG--TTTC
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           5170 6 -     24134 AG--TTTC
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        28995 6 -     67325 AG--TTTC
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           5218 6 -      6182 AG--TTTC
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            10808 6 -     21651 AC--TTTC
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            15505 6 -     21811 AC--TTTC
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40664 6 +     42204 AC--TTTC
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22977200 6 +  28871421 AT--TTTC
i Pteropus_alecto.KB030862.1                             C 0 I 35
s Pteropus_vampyrus.KN534172.1                                7253 6 -      8028 AT--TTTC
i Pteropus_vampyrus.KN534172.1                           C 0 I 35
s Puma_concolor.QAVW01001104.1                            20274738 6 -  38429054 AG--TTTC
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15616 6 -     91421 AA--GTTC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7609736 6 +   7812017 AA--GTTC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             15615 6 -     72585 AA--GTTC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53571031 6 +  90668790 AC--TTTT
i Rattus_norvegicus.chr16                                C 0 I 29
s Rhinopithecus_bieti.k119_217274                             7326 6 -     11128 AA--GTTC
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236675 6 - 195417433 AA--GTTC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672331 6 +   7961872 AA--GTTC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88237 6 -     96226 AC--TTTC
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_8081                                   778 6 +     42994 AA--GTTC
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_57697                                563 6 +      1030 AA--GTTC
i Saguinus_imperator.k141_57697                          C 0 C 0
s Saguinus_inustus.k141_3945547                                642 6 -      8737 AA--GTTC
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_midas.LG03                                    209470129 6 + 209938924 AA--GTTC
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 8764 6 -      9399 AA--GTTC
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951498 6 - 121099817 AA--GTCC
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23840 6 +     46362 AA--GTCC
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               23935 6 +     45824 AA--GTCC
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             40614 6 -     64574 AA--GTCC
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               3687 6 -     23631 AA--GTCC
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 23831 6 -     61129 AA--GTCC
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5421204 6 -   5703754 AA--GTCC
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          56445 6 -     80660 AA--GTCC
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153616 5 -    313613 -T--GCTC
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                          507 6 -     12572 AA--GTTC
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27357 6 +     39453 AA--GTTC
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            7875 6 +     27826 AA--GTTC
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             7397 6 -     19483 AA--GTTC
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                       698 6 -     12762 AA--GTTC
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                            559 6 +     13763 AA--GTTC
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                      711 5 -     30804 AC--TTT-
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               4190 6 +   1910179 AC--TTAT
i Solenodon_paradoxus.SolPar_flattened_line_126          I 3 C 0
s Sorex_araneus.JH798187.1                                13651439 6 -  18376816 AC--TTTT
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1954364 6 -   3870691 ac--tttt
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             31157 6 +     97271 GC--TTTC
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 4
s Suricata_suricatta.SurSur_flattened_line_6629              18755 6 -    196729 AC--TTTC
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6811237 6 +  69701581 at--tttt
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                11244 6 +     41958 GC--TTTC
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73041 6 +    116680 AC--ATCC
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      119217 6 -    156842 AC--TTTC
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387662 6 +    539355 AC--TTTC
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               26900 6 +     70052 GC--TTTC
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1697 6 -     16117 GC--TTTC
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186429046 6 + 186847797 AA--GTTC
i Theropithecus_gelada.CM009954.1                        C 0 I 9
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105858 6 +    114563 AT--TTTC
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   6831 6 +      8208 AC--TTCC
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 I 14
s Tonatia_saurophila.TonSau_scaffold_294                     81624 6 +    610378 GC--CATC
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         11448 6 -     20410 AA--GTTC
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                       562 6 -     12674 AA--GTTC
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       11549 6 +     19930 AA--GTTC
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       7960 6 -     19997 AA--GTTC
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48099 6 -     60166 AA--GTTC
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        15571 6 -     27529 AA--GTTC
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     15515 6 -     18194 AA--GTTC
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9227 6 -     21137 AA--GTTC
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    7930 6 -     10723 AA--GTTC
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7102 6 +      9834 AA--GTTC
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        25415 6 +     32220 AA--GTTC
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5939517 6 +   6242583 AA--GTTC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        8768 6 +     20839 AA--GTTC
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4293672 4 +  10818551 GT----TT
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2156234 6 +   4065304 AC--ATTC
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9677 6 -     10553 AC--ATTC
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   53720 6 -     77625 AC--TTTC
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 36
s Ursus_maritimus.KK499267.1                               4850868 6 -   5085361 AC--TTTC
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  11829 6 +     50397 AG--TTTC
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11888 6 +     24756 AG--TTTC
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5372316 6 -   5488506 AC--TTTC
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 11219 6 -     43706 AC--TTTT
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          1488 6 +    224448 GT--TTTT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      15313 6 +     63895 AA--CTTT
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 1 C 0
e Echinops_telfairi.JH980293.1                            48781023 9 + 111700974 I
e Saguinus_labiatus.k141_285685                               8505 5 +      8564 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Microgale_talazaci.MicTal_scaffold_6613                    22729 9 -    145209 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 50546 0 +     63868 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       7253 83 +     62944 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACTACATGTTT-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGACTCTTCC-C--AT-C--T-GAATCCCA---GC---------ATG---C
s Acinonyx_jubatus.LLWD01001279.1                           827737 85 -   1699592 CT-TC-----TT-------CAC------------T---------CTCC----------------------T-A----TTTCTGCCAATTACACGATT-A-T--TTAA-A-G-CAGTG-T-------A-ACG-T------------CTGACTCTTC--C--ACATC-C-A-ATTCCA---AC---------ATG---C
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     71219 84 +     87051 TT-TC-----AT-------GAC------------T---------GTCG----------------------T-A----TTTCTCCTAAGTA--TGTTT-A-T--TTA--A-G-GTGTTGT-------G-ATA-C------------TTGTCACACCT-C--AC-A-TC-AAATCCAA---AT---------ATA---A
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511013 41 -  29979442 CT-TC-----TT-------GAC------------T---------ATTC----------------------T-A----TTTCTGccaattatatgatt-t-t--tta-------------------------------------------------------------------------------------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 40
s Ailurus_fulgens.LNAC01001112.1                             79785 41 -    347723 CT-TC-----TT-------GAC------------T---------GTCC----------------------T-A----TTTCTGCCaattatatgatt-a-t--tta-------------------------------------------------------------------------------------------
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 38
s Allactaga_bullata.AllBul_scaffold_9566                     74919 86 -     89534 CT-TC-----TT-------GGC------------T---------GTCC----------------------T-G----TTTCTCTCAATTATACTGTA-A-T--TTA--AAG-TGATG-T-------G-CTG-T------------CTGTCTCTTCC-C--AC-C-TC-AAATTCCA---AA---------GTT---C
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   15181 83 -     52922 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATGCTT-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------GTG---C
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15097 83 -     28001 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATGCTT-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------GTG---C
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          5595 83 -     18505 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATGCTT-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------GTG---C
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           6447 83 -     12518 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATGCTT-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------GTG---C
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              8042 83 +     51355 CT-TC-----TT-------TAC------------T---------GGGC----------------------T-A----TTTCTGTCAATTATATGCTT-A-T--AAAA-C-A-TGATG-T-------C-A---T------------CTGACTCTTCC-C--AC-C--C-GAATCCCA---GT---------GTG---C
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                1151 83 -     36483 CT-TC-----TT-------TAC------------T---------GGGC----------------------T-A----TTTCTGTCAATTATATGCTT-A-T--AAAA-C-A-TGATG-T-------C-A---T------------CTGACTCTTCC-C--AC-C--C-GAATCCCA---GT---------GTG---C
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              11600 83 +     28687 CT-TC-----TT-------TAC------------T---------GGGC----------------------T-A----TTTCTGTCAATTATATGCTT-A-T--AAAA-C-A-TGATG-T-------C-A---T------------CTGACTCTTCC-C--AC-C--C-GAATCCCA---GT---------GTG---C
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                  116 83 +     27940 CT-TC-----TT-------TAC------------T---------GGGC----------------------T-A----TTTCTGTCAATTATATGCTT-A-T--AAAA-C-A-TGATG-T-------C-A---T------------CTGACTCTTCC-C--AC-C--C-GAATCCCA---GT---------GTG---C
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            1161 82 -      9457 CT-TC-----TT-------TAC------------T---------GGGC----------------------T-A----TTTCTGTCAATTATATGCTT-A-T--AAAA-C-A-TGATG-T-------C-A---T------------CTGACTCTTCC-C--AC-C--C-GAAT-CCA---GT---------GTG---C
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                              116 83 +     30492 CT-TC-----TT-------TAC------------T---------GGGC----------------------T-A----TTTCTGTCAATTATATGCTT-A-T--AAAA-C-A-TGATG-T-------C-A---T------------CTGACTCTTCC-C--AC-C--C-GAATCCCA---GT---------GTG---C
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              4111 83 +     47717 CT-TC-----TT-------TAC------------T---------GAGC----------------------T-A----TTTCTGTCAATTATATGCTT-A-T--AAAA-C-A-TGGTG-T-------C-A---T------------CTGAGTCTTCC-C--AC-C--C-GAATCCCA---GT---------GTG---C
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                               843 83 +      5663 CT-TC-----TT-------TAC------------T---------GGGC----------------------T-A----TTTCTGTCAATTATATGCTT-A-T--AAAA-C-A-TGATG-T-------C-A---T------------CTGACTCTTCC-C--AC-C--C-GAATCCCA---GT---------GTG---C
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             15295 83 +     50774 CT-TC-----TT-------TAC------------T---------GGGC----------------------T-A----TTTCTGTCAATTATATGCTT-A-T--AAAA-C-A-TGATG-T-------C-A---T------------CTGACTCTTCC-C--AC-C--C-GAATCCCA---GT---------GTG---C
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185784 83 +    412891 CT-TC-----TC-------AAC------------T---------CTCT----------------------G-G----TTTCTACCAATTATACAGTT-A-C--TTAA-A-G-CAGTG-G-------A-ATC-T------------CTGACT----C-C--AGACC-C-AAGTCCCA---AT---------GCC---C
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  16042 83 -     33861 CT-TC-----TT-------TAC------------T---------GTGC----------------------T-A----TTTCTGTCAATTATATGCTT-A-T--AAAG-C-A-TGGTG-T-------C-A---T------------CTGACTCTTCC-C--AC-C--C-GAATCCCA---GT---------GTG---C
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            16088 83 -     34016 CT-TC-----TT-------TAC------------T---------GTGC----------------------T-A----TTTCTGTCAATTATATGCTT-A-T--AAAG-C-A-TGGTG-T-------C-A---T------------CTGACTCTTCC-C--AC-C--C-GAATCCCG---GT---------GTG---C
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4298466 83 -   5030052 CT-TC-----TT-------TAC------------T---------GTGC----------------------T-A----TTTCTGTCAATTATATGCTT-A-T--AAAG-C-A-TGGTG-T-------C-A---T------------CTGACTCTTCC-C--AC-C--C-GAATCCCA---GT---------GTG---C
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             16075 83 -     34685 CT-TC-----TT-------TAC------------T---------GTGC----------------------T-A----TTTCTGTCAATTATATGCTT-A-T--AAAG-C-A-TGGTG-T-------C-A---T------------CTGACTCTTCC-C--AC-C--C-GAATCCCA---GT---------GTG---C
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               29200 83 -     47192 CT-TC-----TT-------TAC------------T---------GTGC----------------------T-A----TTTCTGTCAATTATATGCTT-A-T--AAAG-C-A-TGGTG-T-------C-A---T------------CTGACTCTTCC-C--AC-C--C-GAATCCCA---GT---------GTG---C
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13036 76 +     20879 TTTTC-----CC-------GAC------------T---------ATCC----------------------T-A----TTTCTGCAAATTAAATGATT-A-T--TTA-AA-G-TGTTG-T-------G-TTC-T------------CTGCCTCTTCC-C--AC-CC-C-TAA--------------------------
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       11888 85 +     14667 CC-TT-----TT-------GGC------------T---------ATAC----------------------T-A----GCTCTGCCAATTATATGGCT-A-T--TCAA-A-G-TGGTA-C-------A-ATC-T------------CTGACTCTTCC-C--AC-C--C-AAATTCCA---GT---------GTG---C
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5174 83 +     43469 CT-TC-----TC-------AAC------------T---------GTCT----------------------T-A----TTTCTACCAATGATACAGTT-A-C--CTAA-A-G-TAGTT-G-------A-ATC-T------------CTGACT----C-C--AGACC-C-CAATCCCA---AT---------GCC---C
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  54122 86 -     92717 CT-TT-----CT-------GAT------------T---------GTGC----------------------C-A----TTTCTGCCAATTATATGATT-A-T--TTAA-A-G-TGGTG-C-------A-ATC-T------------CTGATTCTTCC-C--AC-C--CTGAATTCCA---GT---------ATG---C
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54743 86 +     85213 CT-TT-----CT-------GAT------------T---------GTGC----------------------C-A----TTTCTGCCAATTATATGATT-A-T--TTAA-A-G-TGGTG-C-------A-ATC-T------------CTGATTCTTCC-C--AC-C--CTGAATTCCA---GT---------ATG---C
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             5889 83 -     10423 CT-TC-----TT-------TAC------------T---------GTGC----------------------T-A----TTTCTGTCAATTATATGCTT-A-T--AAAA-C-A-TGGTG-T-------C-A---T------------CTGACTCTTTC-C--AC-C--C-GAATCCCA---GT---------GTG---C
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             25358 83 +     31915 CT-TC-----TT-------TAC------------T---------GTGC----------------------T-A----GTTTTGTCAATTATATGCTT-A-T--AAAA-C-A-TGGTG-T-------C-A---T------------CTGACTCTTCC-C--AC-C--C-AAATCCCA---GT---------GTG---C
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23591043 83 - 189096842 CT-TC-----TT-------TAC------------T---------GTGC----------------------T-A----TTTCTGTCAACTATATGCTT-A-C--AAAA-C-A-TGGTG-T-------C-A---T------------CTGACTCTTCC-C--AC-C--C-GAATCCCA---GT---------GTG---C
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                               442 83 -     12329 CT-TC-----TT-------TAC------------T---------GTGC----------------------T-A----TTCCTGTCAATTATATGCTT-A-T--AAAA-C-A-TGGTG-T-------C-A---T------------CTGACTCTTCC-C--AC-C--C-GAATCCCA---GT---------GTG---C
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002789 86 -  17673402 CT-TC-----TC-------AGC------------T---------GCCC----------------------T-A----TTTATACCAATTATATGGTT-A-T--TTAA-A-G-TAGTG-T-------A-ATC-T------------CCAACTTTTCC-C--AG-CC-C-AAATCACA---AT---------GTG---C
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2335265 86 -   7040546 CT-TC-----TC-------AGC------------T---------GCCC----------------------T-A----TTTATACCAATTATATGGTT-A-T--TTAA-A-G-TAGTG-T-------A-ATC-T------------CCAACTTTTCC-C--AG-CC-C-AAATCACA---AT---------GTG---C
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  403562 86 -   1652518 CT-TC-----TC-------AGC------------T---------GCCC----------------------T-A----TTTATACCAATTATATGGTT-A-T--TTAA-A-G-TAGTG-T-------A-ATC-T------------CCAACTTTTCC-C--AG-CC-C-AAATCACA---AT---------GTG---C
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17799602 82 -  60362399 CT-TC-----TT-------GAC------------T---------ATCC----------------------T-A----TTTCTGCC-----TATGATT-A-T--TTAA-A-G-TGGTG-T-------A-ACC-T------------CTGACTCTTCC-C--ACAC-AC-AAATCCCG---AT---------GTA---C
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                      350 82 -     43241 CT-TC-----TT-------GAC------------T---------ATCC----------------------T-A----TTTCTGCC-----TATGATT-A-T--TTAA-A-G-TGGTG-T-------A-ACC-T------------CTGACTCTTCC-C--ACAC-AC-AAATCCCG---AT---------GTA---C
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9035045 82 -   9314153 CT-TC-----TT-------GAC------------T---------ATCC----------------------T-A----TTTCTGCC-----TATGATT-A-T--TTAA-A-G-TGGTG-T-------A-ACC-T------------CTGACTCTTCC-C--ACAC-AC-AAATCCCG---AT---------GTA---C
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17959521 82 -  59632846 CT-TC-----TT-------GAC------------T---------ATCC----------------------T-A----TTTCTGCC-----TATGATT-A-T--TTAA-A-G-TGGTG-T-------A-ACC-T------------CTGACTCTTCC-C--ACAC-AC-AAATCCCG---AT---------GTA---C
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18500818 82 +  63665305 CT-TC-----TT-------GAC------------T---------ATCC----------------------T-A----TTTCTGCC-----TATGATT-A-T--TTAA-A-G-TGGTG-T-------A-ACC-T------------CTGACTCTTCC-C--ACAC-AC-AAATCCCG---AT---------GTA---C
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1472 77 -     12242 CC-TC-----TT-------GAC------------T---------GCCC----------------------T-A----TTGCTGTCAACCAGCTGATTGT-G--TAA--A-G-CAGTG-T-------A-GTC-T------------CTGCCGT-ACCCA--CC-CC-C-CAATC------------------------
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 7
s Carlito_syrichta.NW_007259797.1                           156415 83 -    496798 CT-TC-----CA-------GAC------------C---------ATGC----------------------T-A----CCTCTGCCAGTCATGTGATC-A-C--TGAA-A-G-CAGCG-T-------C-ATC-T------------CTGACTCTTCC-C--TC-C--C-AAGTCCCA----C---------AGG----
i Carlito_syrichta.NW_007259797.1                        C 0 I 7
s Carollia_perspicillata.CarPer_scaffold_92756                5539 83 -     11696 CT-TC-----TC-------AAC------------T---------GTCT----------------------T-A----TTTCTACCAACTATACAGTT-C-C--TTAA-A-G-TAGTG-G-------A-ATC-T------------CTGCCT----C-C--AGACC-C-AAATCCCA---AC---------GCC---T
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137509 87 +    179628 CT-TC-----TT-------GAC------------T---------ATCT----------------------C-A----TTTCTCCCAATTACATGGTT-G-T--TTA--A-AATGCTG-T-------A-ATC-T------------CTGACTCTTCC-C--AC-CCCC-AAATACCA---GT---------GTA---C
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     93496 87 +    217609 CT-TC-----TC-------AGC------------T---------GCCC----------------------T-A----TTTCTACCAATAATACGGTT-A-T--TCAA-G-G-TCCTG-T-------A-ATA-T------------CTGCCTCTTCC-C--AGACC-C-AAATCCCA---AG---------GGG---C
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                         10524 83 -     11392 CT-TC-----TT-------TAC------------T---------GTGC----------------------T-A----TTTCTGTCAATTATATGCTT-A-T--AAAA-C-A-TGGTG-T-------C-A---T------------CTGACTCTTCC-C--AC-C--C-GAATCCCA---GT---------GTG---C
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               6591 83 -      7577 CT-TC-----TT-------TAC------------T---------GTGC----------------------T-A----TTTCTGTCAATTATATGCTT-A-T--AAAA-C-A-TGGTG-T-------C-A---T------------CTGACTCTTCC-C--AC-C--C-GAATCCCA---GT---------GTG---C
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25653256 78 +  26074798 CT-TC-----TT-------TGC------------T---------GCGC----------------------T-A----TTTCTGTCAATTATACGCTT-G-T--AAAA-C-A-TGGCG-T-------C-C---T------------CTGACTCTTCC-C--AC-C--A-GAATCCCT---C-----------------
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                1194 78 +     28840 CT-TC-----TT-------TGC------------T---------GCGC----------------------T-A----TTTCTGTCAATTATACGCTT-G-T--AAAA-C-A-TGGCG-T-------C-C---T------------CTGACTCTTCC-C--AC-C--A-GAATCCCT---C-----------------
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                  919 78 +     14051 CT-TC-----TT-------TGC------------T---------GCGC----------------------T-A----TTTCTGTCAATTATACGCTT-G-T--AAAA-C-A-TGGTG-T-------C-C---T------------CTGACTCTTCC-C--AC-C--A-GAATCCCT---C-----------------
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         5913 83 +     31688 CT-TC-----CA-------GAC------------C---------GTGC----------------------T-A----CCTCTGCCAGTCATGTGATC-A-C--TGAA-A-G-CAGCG-T-------G-ATC-T------------CTGACTCTTCC-C--TC-C--C-AAGTCCCA----C---------AGG----
i Cephalopachus_bancanus.k141_1423433                    C 0 I 7
s Ceratotherium_simum.JH767749.1                          12231883 87 +  27778364 CA-TC-----TT-------GAC------------A---------GTCC----------------------T-A----TTTCTGCCaattatatgatt-a-t--ttaa-a-G-TGGTG-T-------A-ATC-T------------CTGAGTCTTCC-C--ACACC-C-GAATCCCA---AC---------GTG---C
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2910 87 -     25243 CA-TC-----TT-------GAC------------A---------GTCC----------------------T-A----TTTCTGCCAATTATATGATT-A-T--TTAA-A-G-TGGTG-T-------A-ATC-T------------CTGAGTCTTCC-C--ACACC-C-GAATCCCA---AC---------GTG---C
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4476112 83 +   4669795 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATGCTT-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AC-C--T-GAATCCCA---GC---------GTG---C
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                         625 72 +     17872 ---------------------------------------------TGC----------------------T-A----TTTCTGTCAACCACATGCTT-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------GTG---C
i Cercocebus_chrysogaster.k141_1540778                   I 9 C 0
s Cercocebus_lunulatus.k141_3342297                           1273 81 -     14043 CT-TC-----TT-------GAC------------T---------G--C----------------------T-A----TTTCTGTCAACCACATGCTT-A-T--AAAA-C-A-TGGAG-C-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------GTA---C
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9306 81 +     27781 CT-TC-----TT-------GAC------------T---------G--C----------------------T-A----TTTCTGTCAACCACATGCTT-A-T--AAAA-C-A-TGGAG-C-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------GTG---C
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         9472 83 -     20310 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATGCTT-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---AC---------GTG---C
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          12452 83 +     29689 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATGCTT-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---AC---------GTG---C
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7202 83 -     20078 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATGCTT-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------GTG---C
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          15120 83 -     27936 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATGCTT-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------GTG---C
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            3990 83 -     17152 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATGCTT-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------GTG---C
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38817531 83 +  39242232 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATGCTT-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------GTG---C
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223221 83 -  21565898 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGCCAACCACATGCTT-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------GTG---C
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40339 83 -     53127 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATGCTT-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------GTG---C
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                         590 83 +     13442 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTAAACCACATGCTT-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------GTG---C
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15139 83 -     27947 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATGCTT-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------GTG---C
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         15115 83 +     17596 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATGCTT-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------GTG---C
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          1162 83 +     14005 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATGCTT-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------GTG---C
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870             973 33 -      8501 ------------------------------------------------------------------------A----CTTCTGACAATGACACGATC-A-T---TCA-A-G-TGGTG--------------------------------------------------------------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       I 14 I 18
s Cheirogaleus_major.k141_333249                             21492 86 -     52598 CT-TT-----TT-------GAC------------T---------GTGC----------------------G-A----TTTCTGCCAATTATATGATT-A-T--TTAA-A-G-TGGCG-C-------A-ATC-T------------CTGACTCTTCC-C--AC-C--CAGAATTCCA---GT---------GTG---C
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16857 86 +     57038 CT-TT-----TT-------GAC------------T---------GTGC----------------------G-A----TTTCTGCCAATTATACGATT-A-T--TTAA-A-G-TGGCG-C-------A-ATC-T------------CTGACTCTTCC-C--AC-C--CAGAATTCCA---GT---------GTG---C
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1253336 87 +   2543920 ca-tc-----tt--------gCCTATTTCCATCTT---------GCCC----------------------T-A----TTCCTG-TGACCAGGTGATTAT-G--TGA--A-A-CAGTA-C-------A-GTC-C------------CTGTCTTTCCC-C--AC-CC-C-AAGTC------------------------
i Chinchilla_lanigera.JH722012.1                         I 97 I 7
s Chiropotes_albinasus.k141_2206961                            790 83 -     15524 CT-TC-----TT-------TAC------------T---------GTGC----------------------T-A----GTTCTGTCAATTATATGCTT-A-T--AAAA-C-A-TGGTG-T-------C-A---T------------CTGACTCTTCC-C--AC-C--C-GAATCCCA---GG---------GTG---C
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18429099 83 -  18827391 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATGCTT-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------GTG---C
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15536 83 -     50209 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATGCTT-A-T--GAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAGTCCCA---GC---------GTG---C
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422536 83 + 135778131 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATGCTT-A-T--GAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------GTG---C
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 18736 86 +     19366 CT-TC-----TT-------GAC------------T---------ATCT----------------------T-A----TTTCTAACAAGAATATGGTT-A-T--TTAA-A-G-AGGTG-T-------A-ACC-T-------------CTCCTCTTCC-C--ACACC-T-GAAACACA---AT---------GTG---C
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            173813 86 +    839153 CT-TC-----TT-------GAC------------T---------ATCT----------------------T-A----TTTCTAACAAGAATATGGTT-A-T--TTAA-A-G-AGGTG-T-------A-ACC-T-------------CTACTCTTCC-C--ACACC-T-GAAACACA---AT---------GTG---C
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1911049 83 +   2368649 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------GTG---C
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949301 83 + 200372422 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------GTG---C
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37583 83 +     84244 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------GTG---C
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17548504 36 -  53390261 CT-CC-----TT-------GAC------------G---------GTAC----------------------T-A----TTTCTGCCAGTTAAATGAGT----------------------------------------------------------------------------------------------------
i Condylura_cristata.JH655891.1                          C 0 I 45
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14837 87 -     20389 TT-TC-----TC-------AAC------------A---------ATCT----------------------T-A----TTTCTACCAATCATAGGGTT-C-T--TTAA-A-G-TGGTA-T-------A-ATT-T------------CTGACTCTTTT-C--AGATC-C-AAATCCCA---TT---------GAG---C
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetulus_griseus.LT883664.1                           11667979 62 + 224834208 TT-TT-----TC-------GGC------------T---------GTAG----------------------T-A----TTTCTCCCAATTA--TGATT-A-T--TTA--A-A-CTATGTT-------G-A-GCC------------C--TCTCTTCC-----------------------------------------
i Cricetulus_griseus.LT883664.1                          C 0 I 18
s Crocidura_indochinensis.CroInd_scaffold_37019               3412 36 -     19598 CT-TT-----TT-------AAC------------T---------GT-C----------------------CTATTTCTTCAAGTGA-TACTAAT-------------------------------------------------------------------------------------------------------
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 I 43
s Cryptoprocta_ferox.CryFer_flattened_line_16129             28924 86 -     87169 CT-TC-----TT-------CAC------------T---------ATCC----------------------T-A----TTTCTGCCAATTACATGATT-C-T--TTAA-A-G-CAGTG-T-------A-ACA-T------------CTGACTCTTC--C--ACATC-T-AAATTCCA---AT---------GTG---C
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837507 49 +   1526836 ---TC-----TT-------GAT------------T---------GCCC----------------------T-A----TTTCTGCCAATTACGTGATT-T-T--TAA--A-G-CAAGA-T-------A-A--------------------------------------------------------------------
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 32
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  36360 73 +     51376 CC-TC-----TT-------GAC------------T---------GCCC----------------------T-C----TTTCTGCCGACTGGTCCATTGT-G--TAA--A-G-CAGTG-T-------A-GTT-T------------GTGTCTT-ACC-C--AC-CC-C-GA---------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 7
s Dasypus_novemcinctus.JH564415.1                            63968 70 +   2246927 -----------------------------------------------------------------------------ATTCTGACAAGGCTATGGTC-A-T---TAA-C-G-TGGTG-T-------A-ACC-T------------CAGACCCTTCC-C--ACGCC-T-GATGCCCA---GC---------GTG---C
i Dasypus_novemcinctus.JH564415.1                        I 15 C 0
s Daubentonia_madagascariensis.ctg71                      12537714 86 -  12879189 CT-CT-----CT-------GAC------------T---------GTGC----------------------T-A----TTGCTGCCAATTACATGATG-A-T--TTAA-A-G-TGTTG-T-------A-ATC-T------------CTGACTCTTCC-C--AC-C--CCGAATTCCA---GC---------ACA---C
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630555 83 +  20541912 CT-GT-----TC-------AAC------------T---------GTCT----------------------T-A----CCTCTACCAATTACAGAGTT-A-G--TTAA-A-G-TAGTG-G-------C-ATC-T------------CTGACT----C-C--AGACC-C-AAATCCCA---AA---------GCC---C
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673732 87 +   1390856 CA-TC-----TC-------GAC------------A---------GTCC----------------------T-A----TTTCTGCcaattatatgatt-a-t--ttaa-g-g-TGGTG-T-------A-ATC-T------------CTGAGTCTTCC-C--ACATC-T-GAATCCCA---AT---------GTG---C
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6483 87 +    198055 CA-TC-----TT-------GAC------------A---------GTCC----------------------T-A----TTTCTGCCAATTATATGATT-A-T--TTAA-A-G-TGGTG-T-------A-ATC-T------------CTGAGTCTTCC-C--ACACC-C-GAATCCCA---AC---------GTG---C
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36823 89 +     67921 CG-TC-----TT-------CACTTATTTCCATTTT---------GTCC----------------------T-A----TTTCTGCTGACCAGGTGATTAT-G--TAA--A-G-CAGTG-T-------A-GTC-T------------CTGTCTTTCCC-C--AC-CC-C-AAATC------------------------
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 7
s Echinops_telfairi.JH980293.1                            48781032 37 + 111700974 ---tt-----tt-------tac------------t---------atgc----------------------T-A----CTTCTTCCAATGACATGATT-A-T--T---------------------------------------------------------------------------------------------
i Echinops_telfairi.JH980293.1                           I 9 I 39
s Eidolon_helvum.KE759718.1                                  10962 87 +     11740 CT-TA-----TC-------AAC------------T---------GTCC----------------------T-A----TTTCTACCAATTATATGGTT-A-T--TTAA-A-G-TGGTG-T-------A-ATC-T------------CTGACTCTTTC-T--GGACC-C-AAATCCGA---AA---------ATA---T
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1098202 83 +  10337057 CT-TC-----TT-------GAC------------T---------ATTA----------------------T-C----TG---CCAGGTGATATGATT-A-T--TTAC-A-G-TGACA-T-------A-ATC-T------------CTGAT-CTTGC-C--ACACC-T-AAATTCCA---AT---------GTA---A
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          20701 82 -    110024 tt-tc-----tt-------tac------------t---------gtag----------------------T-A----TTTCTCCCAATTA--TGATT-A-T--TTG--A-G-CTGTGGT-------G-ATC-c------------c--tctcttcc-c--ac-c-tc-aaatacca---aa---------ata---a
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 227
s Ellobius_talpinus.LOJH01081419.1                             832 82 +      8657 TT-TC-----TT-------GAC------------T---------GTAG----------------------T-A----TTTCTCCCAATTA--TGATT-A-T--TTG--A-G-CTGTGGT-------G-ATC-c------------c--tctcttcc-c--ac-c-tc-aaatacCA---AT---------ATA---A
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16329741 41 -  41312741 CT-TC-----TT-------GAC------------T---------GTCC----------------------T-A----TTTATGACAATCATATGATT-A-T--TTA-------------------------------------------------------------------------------------------
i Enhydra_lutris.KZ291758.1                              C 0 I 39
s Eptesicus_fuscus.JH977646.1                              2146174 73 -  14770903 ----------------------------------------------------------------------T-A----TTTCTACCAATTGTATGGTT-A-T--TTAA-A-G-TAGTG-T-------A-ATC-T------------CTGACTCTTTC-C--AGACC-C-AAATACCA---GG---------ATC---C
i Eptesicus_fuscus.JH977646.1                            I 10 C 0
s Equus_asinus.JREZ01000139.1                              1283991 87 +   4378816 CT-TC-----GC-------TAC------------T---------GTCC----------------------T-A----TCCCTGCCAATTATATGATT-A-T--TTAA-A-G-TGGTG-T-------C-ATC-T------------CTGACTCTTCC-C--ACCCC-T-GAATCcca---gt---------gtg---c
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18531811 87 -  39960074 CT-TC-----GC-------TAC------------C---------TTCC----------------------T-A----TTCCTGCCAATTATATGATT-A-T--TTAA-A-G-TGGTG-T-------C-ATC-T------------CTGACTCTTCC-C--ACCCC-C-GAATCcca---gt---------gtg---c
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               33840 87 +    498745 CT-TC-----GC-------TAC------------C---------TTCC----------------------T-A----TTCCTGCCAATTATATGATT-A-T--TTAA-A-G-TGGTG-T-------C-ATC-T------------CTGACTCTTCC-C--ACCCC-C-GAATCcca---gt---------gtg---c
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3328633 58 -   7059049 CT-TA-----TT-------ACT------------G---------CCCTATTTTGGCCAATTAAGTTATCCT-A----TTTCCATCAATTAATTGATT----------------------------------------------------------------------------------------------------
i Erinaceus_europaeus.JH835339.1                         C 0 I 69
s Erythrocebus_patas.Contig38                             21205704 83 -  21539334 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATGCTT-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------GTG---C
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_576796                              40537 86 -     44621 CT-TT-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGCCAATTATACGATT-A-T--TTAA-A-G-TGGCG-C-------A-ATC-T------------CTGACTCTTCC-C--AC-C--CCCAATTCCA---GT---------GTG---C
i Eulemur_albifrons.k141_576796                          C 0 C 0
s Eulemur_collaris.k141_377015                                6918 86 -     16928 CT-TT-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGCCAATTATACGATT-A-T--TTAA-A-G-TGGCG-C-------A-ATC-T------------CTGACTCTTCC-C--AC-C--CCCAATTCCA---GT---------GTG---C
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              15950 86 -     25546 CT-TT-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGCCAATTATACGATT-A-T--TTAA-G-G-TGGCG-C-------A-ATC-T------------CTGACTCTTCC-C--AC-C--CCCAATTCCA---GT---------GTG---C
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            13146 86 +     26330 CT-TT-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGCCAATTATACGATT-A-T--TTAA-A-G-TGGCG-C-------A-ATC-T------------CTGACTCTTCC-C--AC-C--CCGAATTCCA---GT---------GTG---C
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14381 86 +     23973 CT-TT-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGCCAATTATACGATT-A-T--TTAA-A-G-TGGCG-C-------A-ATC-T------------CTGACTCTTCC-C--AC-C--CCCAATTCCA---GT---------GTG---C
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                13143 86 +     75513 CT-TT-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGCCAATTATACGATT-A-T--TTAA-A-G-TGGCG-C-------A-ATC-T------------CTGACTCTTCC-C--AC-C--CCGAATTCCA---GT---------GTG---C
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 11073 86 +     97555 CT-TT-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGCCAATTATACGATT-A-T--TTAA-A-G-TGGCG-C-------A-ATC-T------------CTGACTCTTCC-C--AC-C--CCCAATTCCA---GT---------GTG---C
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              564 86 +     13026 CT-TT-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGCCAATTATATGATT-A-T--TTAA-A-G-TGGCG-C-------A-ATC-T------------CTGACTCTTCC-C--AC-C--CTGAATTCCA---GT---------GTG---C
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4617 86 -     17153 CT-TT-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGCCAATTATACGATT-A-T--TTAA-A-G-TGGCG-C-------A-ATC-T------------CTGACTCTTCC-C--AC-C--CCCAATTCCA---GT---------GTG---C
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              14190 86 +    111500 CT-TT-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGCCAATTATACGATT-A-T--TTAA-A-G-TGGCG-C-------A-ATC-T------------CTGACTCTTCC-C--AC-C--CCCAATTTCA---GT---------GTG---C
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237379 85 + 206538554 CT-TC-----TT-------CAC------------T---------CTCC----------------------T-A----TTTCTGCCAATTACACGATT-A-T--TTAA-A-G-CAGTG-T-------A-ACG-T------------CTGACTCTTC--C--ACATC-C-A-ATTCCA---AC---------ATG---C
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20196222 85 + 205367284 CT-TC-----TT-------CAC------------T---------CTCC----------------------T-A----TTTCTGCCAATTACACGATT-A-T--TTAA-A-G-CAGTG-T-------A-ACG-T------------CTGACTCTTC--C--ACATC-C-A-ATTCCA---AC---------ATG---C
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                  9975 85 -     36744 CT-TC-----TT-------CAC------------T---------CTCC----------------------T-A----TTTCTGCCAATTACACGATT-A-T--TTAA-A-G-CAGTG-T-------A-ACG-T------------CTGACTCTTC--C--ACATC-C-A-ATTCCA---AC---------ATG---C
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             850859 96 +   3816255 CT-CC-----TC-------GAC------------T---------GCCC----------------------T-A----TTTCTGCCAATTAGATGATTAT-T--TAA--A-G-CAGTA-T-------A-ATC-T------------CTGTTTTATCC-C--AC-CC-C-AAATCCCA---TTGTGAAGTTAG--Attc
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg2040                                     427036 85 -    453645 CC-TT-----TT-------GGC------------T---------ATAC----------------------T-A----GCTCTGCCAATTATATGGCT-A-T--TCAA-A-G-TGGTA-C-------A-ATC-T------------CTGACTCTTCT-C--AC-C--C-AAAATCCA---GT---------GTG---C
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4726 85 +     11339 CC-TT-----TT-------GGC------------T---------ATAC----------------------T-A----GCTCTGCCAATTATATGGCT-A-T--TCAA-A-G-TGGTA-C-------A-ATC-T------------CTGACTCTTCT-C--AC-C--C-AAAATCCA---GT---------GTG---C
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            2024 85 +     41679 CC-TT-----TT-------GGC------------T---------ATAC----------------------T-A----GCTCTGCCAAGTATATGGCT-A-T--TCAA-A-G-TGGTA-C-------A-ATC-T------------CTGACTCCTCT-C--AC-C--C-AAAATCCA---GT---------GTG---C
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1623 86 -      9135 CT-TC-----TA-------GAC------------T---------GTTC----------------------T-G----TTTCTGGCAATTATAAGATC-A-T--TTAA-A-G-TGCTG-T-------A-ACC-T------------CTGACCCTTCC-C--AC-C-GC-GGATCCCT---GC---------GTG---C
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            31794 85 +     49224 CT-TC-----TT-------GAC------------T---------GTCC----------------------T-A----TTTCTACCAATTATATGATT-TTT--T---AA-G-TGGTG-C-------A-ATC-T------------CAGTCTCTTCC-A--GT-CC-C-AAATC---ACAAT---------GTA---C
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              16508 83 -     32273 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACTACATGCTT-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGACTCTTCC-C--AT-C--T-GAATCCTA---GC---------ATG---C
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186338644 83 + 186649187 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACTACATGCTT-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGACTCTTCC-C--AT-C--T-GAATCCTA---GC---------ATG---C
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33035 89 +     78134 CT-TC-----TT-------GAC------------T---------GTCC----------------------T-A----TTTCCACCGATTATACAATT-TTTTTTTT-AA-G-TGGTG-C-------A-GTC-T------------CAGTCTCTTCC-A--GT-C-GC-AAATC---CCAAT---------GTA---C
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           7249 86 -     19426 CT-TT-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGCCAATTATACGACT-A-T--TTAA-A-G-TGGTG-A-------A-ATC-T------------CTGACTCTTCC-C--AC-C--CCGAATTCCA---GT---------GTG---C
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12398 86 -     15286 CT-TT-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGCCAATTATACGACT-A-T--TTAA-A-G-TGGCG-C-------A-ATC-T------------CTGACTCTTCC-C--AC-C--CCAAATTCCA---GT---------GTG---C
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             14037 86 +     18253 CT-TT-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGCCAATTATACGACT-A-T--TTAA-A-G-TGGCG-C-------A-ATC-T------------CTGACTCTTCC-C--AC-C--CCAAATTCCA---GT---------GTG---C
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         14138 86 -     41752 CT-TT-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGCCAATTATACGACT-A-T--TTAA-A-G-TGGCG-C-------A-ATC-T------------CTGACTCTTCC-C--AC-C--CCGAATTCCA---GT---------GTG---C
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         13975 86 -     16460 CT-TT-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGCCAATTATACGACT-A-T--TTAA-A-G-TGGCG-C-------A-ATC-T------------CTGACTCTTCC-C--AC-C--CCAAATTCCA---GT---------GTG---C
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242758 86 +    327341 CT-TC-----TT-------CAC------------T---------GTCC----------------------T-A----TTTCTGCCAATTACATGATT-C-T--TTAA-A-G-CACTG-T-------A-ACG-C------------GTGACTCTTC--C--ACATC-C-AAATTATG---AT---------GCG---C
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20662616 96 +  22651954 tt-tc-----tt-------gac------------t---------gCCC----------------------T-A----TTTCTGCAGATTAGATGATTAT-T--TAA--A-G-CAGTG-T-------A-GTC-T------------CTGTCTTTTCC-C--AC-CC-C-AAATCCCA---GTGTGTGGTTAg--attc
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1319 70 +      7595 CT-TT-----TT-------GAC------------A---------ATTC----------------------C-A----TTTCCTCCCATGACCTGCTT-A-T--TTAA-A-G-TGGCA-C-------A-AAC-T------------CGGAT-CTCCC-T--ACCC---------------------------------
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 I 15
s Hoolock_leuconedys.ctg274                                    435304 83 +    630532 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACTACATGCTT-A-T--AAAA-G-A-TGGAG-T-------C-A---T------------CTGACTCTTCC-C--AT-C--T-GAATCCCA---GC---------GTG---C
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45451 93 +     55795 CT-TC-----TT-------CAC------------T---------GTGC----------------------T-A----TTTCTGCCAATTACAGGATT-A-T--TTAA-A-G-CAGTG-TAAATAATA-ACG-T------------CTGACTCTTC--C--ACATC-C-AAATTCCA---AA---------GTG---C
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83520 85 +    135385 TT-TC-----TT-------GAC------------T---------GCCC----------------------T-A----TTTCTGCCAATTAGATGATT-T-C--TAA--A-G-CAGCA-T-------A-GTC-T------------CTGTCTTCCCC-C--AC-CC-C-AAATCCCC---AT---------GTG---C
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7521315 80 -   7955117 ct-ttttttttt-------aac------------t---------gccc----------------------t-A----TTTCTGCCAATaatatcatt-a-t--tca-aa-g-tatTG-T-------G-ATC-T------------CTGCCTCTTGC-C--AT-CC-C-AAA--------------------------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   22935 86 +     31101 CT-TT-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGCCAATTATATGATT-A-T--TTAA-A-G-TGGCA-C-------A-ATC-T------------CTGACTTTTCC-C--GC-T--CTGAATTCCA---GT---------GTG---C
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8277219 94 -   9596543 CT-TC-----TT-------GGC------------TGCCCTGTCTGTCC----------------------T-G----TTTCTCTCAATTATATTGTA-A-T--TTA--AAG-TGAtg-t-------g-ctc-t------------ctgtctcttc--c--ac-C-GC-AAATTCCA---AA---------GTG---C
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    16818 73 -     42476 ----------------------------------------------------------------------T-C----TTTCTTCCAATGTTATCATC-A-T--TTAA-A-G-CAGTG-T-------C-ATC-T------------CTGACTCTTTC-A--GGCCC-C-GAATACCA---GG---------ATC---C
i Lasiurus_borealis.LasBor_scaffold_32767                I 40 C 0
s Lemur_catta.scaffold_24                                 15524490 86 -  30322482 CT-TT-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGCCAATTATACGACT-A-T--TTAA-A-G-TGGCG-C-------A-ATC-T------------CTGACTCTTCC-C--AC-C--CCGAATTCCA---GT---------GTG---C
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        8168 83 +     64341 CT-TC-----TT-------CAC------------T---------GTGC----------------------T-A----GTTCTGTCAATTATATGCTT-A-T--AAAA-C-G-TGGTG-T-------C-A---T------------CTGACTCTTCC-C--AC-C--C-GACTCCCA---GG---------GTG---C
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                            508 83 -     35062 CT-TC-----TT-------CAC------------T---------GTGC----------------------T-A----GTTCTGTCAATTATATGCTT-A-T--AAAA-C-G-TGGTG-T-------C-A---T------------CTGACTCTTCC-C--AC-C--C-GAATCCCA---GG---------GTG---C
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        8196 83 +     35603 CT-TC-----TT-------CAC------------T---------GTGC----------------------T-A----GTTCTGTCAATTATATCCTT-A-T--AAAA-C-G-TGGTG-T-------C-A---T------------CTGACTCTTCC-C--AC-C--T-GAATCCCA---GG---------GTG---C
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    29610 83 +     38576 CT-TC-----TT-------TAA------------T---------ATGC----------------------T-A----GTTCTGTCAATTACATGCTT-A-T--AAAA-C-A-TGGTG-T-------C-A---T------------CTGACTCTTCC-C--AC-C--T-GAATCCCA---AT---------GTG---C
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         26310 83 +     66356 CT-TC-----TT-------TAA------------T---------ATGC----------------------T-A----GTTCTGTCAATTACATGCTT-A-T--AAAA-C-T-TGGTG-T-------C-A---T------------CTGACTCTTCC-C--AC-C--T-GAATCCCA---GT---------GTG---C
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         11382 86 -     23766 CT-TT-----GT-------GAC------------T---------GTGC----------------------T-A----TTTCTGCCAATTATATGATT-A-T--TTAA-A-G-TGGCC-C-------A-ATC-T------------CTGATTCTTCC-C--AC-C--CCAAATTCCA---GT---------GTG---C
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29443 86 +     45836 CT-TT-----GT-------GAC------------T---------GTGC----------------------T-A----TTTCTGCCAATTATATGATT-A-T--TTAA-A-G-TGGCC-C-------A-ATC-T------------CTGATTCTTCC-C--AC-C--CCAAATTCCA---GT---------GTG---C
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          1981 86 +     25010 CT-TT-----GT-------GAC------------T---------GTGC----------------------T-A----TTTCTGCCAATTATATGATT-A-T--TTAA-A-G-TGGCC-C-------A-ATC-T------------CTGATTCTTCC-C--AC-C--CCAAATTCCA---GT---------GTG---C
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27379 86 +     54090 CT-TT-----GT-------GAC------------T---------GTGC----------------------T-A----TTTCTGCCAATTATACAATT-A-T--TTAA-A-G-TGGCC-C-------A-ATC-T------------CTGATTCTTCC-C--AC-C--CCAAATTCCG---GT---------GTG---C
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3043525 40 +   3914936 -------------------------------------------------------------------------------------------------------------------TG-T-------A-ACC-C------------CTAACTCTTCC-C--ATACC-C-AAATCCCA---GT---------GTG---C
i Leptonychotes_weddellii.KB714746.1                     I 41 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6907 86 -     14121 CT-TC-----TT-------AAC------------T---------GTTC----------------------T-G----TTTCTGTCAATGAAATGATT-A-T--TTAA-A-G-GGGTG-T-------G-ATC-T------------CTCACTCTTCC-C--AC-TC-T-GAACACCA---GT---------GTA---A
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437666 72 +   1826925 ---------------------------------------------TGC----------------------T-A----TTTCTGTCAACCACATGCTT-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------GTG---C
i Lophocebus_aterrimus.ctg367                            I 9 C 0
s Loris_lydekkerianus.k141_2539221                            6284 85 +     11245 CC-TT-----TT-------GGC------------T---------ATAC----------------------T-A----GCTTTGCCAGTTATACGGTA-A-T--TCAA-A-G-TGGTA-C-------A-ATC-T------------CTGACTCTTCC-C--AC-C--C-AGATTCCA---GT---------GTG---C
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1005105 85 +   6120653 CC-TT-----TT-------GGC------------T---------ATAC----------------------T-A----GCTTTGCCAGTTATACGGTA-A-T--TCAA-A-G-TGGTA-C-------A-ATC-T------------CTGACTCTTCC-C--AC-C--C-AGATTCCA---GT---------GTG---C
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4217752 86 -  43346337 CT-TC-----TT-------GAC------------T---------GTTT----------------------C-A----TTTCCTCCAGTGATCTGATT-A-T--TTAA-A-G-TGGCA-T-------A-AAC-T------------CTGAT-CTTCC-T--GCACC-A-GAAATCCA---AT---------GTG---A
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17955761 82 -  59628241 CT-TC-----TT-------GAC------------T---------ATCC----------------------T-A----TTTCTGCC-----TGAGATT-A-T--TTAA-A-G-TGGTG-T-------A-ACC-T------------CTGACTCTTCC-C--ACAC-AC-AAATCCCG---AT---------GTA---C
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               7470 83 +     40492 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAG-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------ATG---C
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59676729 83 +  60120075 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAG-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------ATG---C
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13245 83 -     26193 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAG-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------ATG---C
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            81029 83 -    114318 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAG-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------ATG---C
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  6716 83 -     23192 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAG-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------GTA---C
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16189 83 -     29190 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAG-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------ATG---C
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  24754 83 +     37952 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAG-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------ATG---C
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186839843 83 + 187317192 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAG-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------ATG---C
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458406 83 -  25927173 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAG-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------ATG---C
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  80602 83 +     89720 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAG-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------ATG---C
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 7603 83 +     20474 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAG-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------ATG---C
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   7403 83 -     14993 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAG-C-A-TGGAA-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------ATG---C
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  330269 83 -    668171 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAG-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------ATG---C
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 5716 83 -     24072 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAG-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------ATG---C
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26341 83 -     45290 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAG-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------ATG---C
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91053 87 +     94391 CT-TA-----TC-------AAC------------T---------GTCC----------------------T-A----TTTCTACTGATTATATGGTT-A-T--TTAA-A-A-TGGTG-T-------A-ATC-T------------CTGACTCTTTC-T--CGACC-C-AAATCTCA---AA---------GTA---C
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23937932 83 -  24302211 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATGCTT-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------GTG---C
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352056 83 +    752769 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATGCTT-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------GTG---C
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              18945 33 +    737560 CT-TG-----TC-------AAC------------T---------GCCC----------------------T-G----TTTCTGCCAATTAgatg-------------------------------------------------------------------------------------------------------
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              50931 33 -    317179 CT-TG-----TC-------AAC------------T---------GCCC----------------------T-G----TTTCTGCCAATTagatg-------------------------------------------------------------------------------------------------------
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33103513 79 -  40650429 gg-gttttt-tt-------aac------------t---------GCCC----------------------T-A----TTTCTGCcaataatattatt-a-t--tca-aa-g-tattG-T-------G-ATC-T------------CTGCCTCTTGC-C--AC-CC-C-AAA--------------------------
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        10873 86 -    207569 CT-TC-----CC-------AAC------------T---------GTCC----------------------T-A----TTCCTACCCATTATGTGGT--A-T--TTAA-A-G-TGGTA-T-------A-ATT-T------------CAGACTCTTCC-C--AGACC-C-AAATCCCA---GC---------ATG---C
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10476 41 +     13704 CT-TC-----TT-------GAC------------T---------GTCC----------------------T-A----TTTCTGCCAATCATATGATT-A-T--TTA-------------------------------------------------------------------------------------------
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 39
s Meriones_unguiculatus.MerUng_scaffold_7390                 33169 84 +    140813 TT-TC-----TT-------GAC------------T---------GTCA----------------------T-A----ATTTTCCCAATTA--TGATT-A-T--TTA--A-G-GTGCAGT-------G-A-GCC------------TAGTCTCTTTC-C--AT-A-TC-AAATCCCA---AT---------ATA---A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12182634 62 -  29670104 CT-TT-----TT-------GGC------------T---------GTAG----------------------T-A----TTTCTCCCAATTA--TGATT-A-T--TTA--A-A-CTGCGGT-------G-A-GTC------------C--TCTCTTCC-----------------------------------------
i Mesocricetus_auratus.KB708134.1                        C 0 I 19
s Mico_argentatus.k141_1239457                                6403 83 -      7380 CT-TC-----TT-------TAC------------T---------GTGC----------------------T-A----TTTCTGTCAATTATATGCTT-A-T--AAAA-C-A-TGGTG-T-------C-A---T------------CTGACTCTTTC-C--AC-C--C-AAATCCCA---GT---------GTG---C
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_2457295                                632 83 +      1079 CT-TC-----TT-------TAC------------T---------GTGC----------------------T-A----TTTCTGTCAATTATATGCTT-A-T--AAAA-C-A-TGGTG-T-------C-A---T------------CTGACTCTTTC-C--AC-C--C-GAATCCCA---GT---------GTG---C
i Mico_humeralifer.k141_2457295                          C 0 C 0
s Mico_schneideri.k141_1950671                                      6415 83 -      7356 CT-TC-----TT-------TAC------------T---------GTGC----------------------T-A----TTTCTGTCAATTATATGCTT-A-T--AAAA-C-A-TGGTG-T-------C-A---T------------CTGACTCTTTC-C--AC-C--C-AAATCCCA---GT---------GTG---C
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18291916 86 -  93316391 CT-TT-----TT-------GAC------------T---------GTGC----------------------G-A----TTTCTGCCAATTATACGATT-A-T--TTAA-A-G-TGGCA-C-------A-ATC-T------------CTGACTCTTCC-C--AA-T--CCGAATTCCA---GT---------GTG---C
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    22738 37 -    145209 ---TC-----TT-------GCC------------T---------ATTC----------------------T-A----TTTCTTCCAATGACATGTTT-A-T--C---------------------------------------------------------------------------------------------
i Microgale_talazaci.MicTal_scaffold_6613                I 9 I 39
s Micronycteris_hirsuta.MicHir_scaffold_52381                16079 83 -     19307 CT-TC-----TC-------AAC------------T---------GTCT----------------------T-A----TTTCTACCAATTATAGAGTT-A-C--TTAA-A-G-TAGTG-G-------A-A-GCT------------CTGATT----C-C--AGACC-C-AAATCCCA---AG---------GTC---C
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11260882 81 -  27267610 TT-TC-----TT-------GAC------------T---------GTAG----------------------T-A----TTTCTCCCAGTTG--TGATT-A-T---TA--A-G-CTGTGAT-------G-Att-c------------c--tctcttcc-c--ac-c-tc-agatCCCA---AT---------ATA---A
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1851036 86 +   8254450 CT-GC-----TC-------AAC------------T---------GTGT----------------------T-A----TTTCTACCAATTATGTAGTT-A-T--TGAA-A-G-CAGTG-A-------G-ATC-T------------CTGACTCTC-C-G--AGACC-C-AAGCCCCA---AC---------GTC---C
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34717 87 +     64694 CT-GC-----TC-------AAC------------T---------GTGT----------------------T-A----TTTCTACCAATTATGTAGTT-A-T--TGAA-A-G-CAGTG-A-------G-ATC-T------------CTGACTCTCCC-C--AGACC-C-AAGCCCCA---AC---------GTC---C
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9638 83 -     28506 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATGCTT-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCCTCC-C--AT-C--T-GAATCCCA---GC---------GTG---C
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6358 35 -      8324 -------------------GAC------------T---------GTCC----------------------T-A----TTTCTGCCAGTTATATGATT-A-T--TTA-------------------------------------------------------------------------------------------
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 6 I 40
s Mirza_zaza.k141_952172                                      9460 86 -     37649 CT-TT-----TT-------GAC------------T---------GTGC----------------------G-A----TTTCTGCCAATTATACGATT-A-T--TTAA-A-G-TGGCG-C-------A-ATC-T------------CTGACTCTTCC-T--AC-C--CCGAATTCCA---GT---------GTG---C
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142060 87 -    366855 CT-TC-----TC-------AGC------------T---------GTTT----------------------T-A----TTTCTACCAATTATAGAGTT-A-T--TTAA-A-G-TAGTG-T-------A-ATC-T------------CTGCCTCTTTC-C--AGACC-C-CAATCCCA---AG---------GTC---C
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35858 85 +     37127 CT-TC-----TT-------CAC------------T---------GTCC----------------------T-A----TTTCTGCCAATTACACGATT-C-C--TTAA-A-G-CACTG-C-------A-ACG-T------------GTGA-TCTTC--C--ACATC-C-CAATTGCG---AT---------GCG---T
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           7259 85 +     14753 CT-TT-----GC-------AAC------------T---------G--T----------------------T-A----CTTCTACCAATTGCATCATT-A-T--TTAA-A-G-CATTG-T-------A-ATC-T------------CTGACTCTTCC-C--AGACC-C-AAATACGA---GG---------GTC---C
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84361788 70 - 120012414 ------------------------------------------------------------------------T----TTTCTTCCAATTA--TGATT-A-T--TCA--A-G-GTGTGGT-------GCATC-C------------TTGTCTCTTCC-C--AC-A-TC-AAATCCTA---AT---------ATA---A
i Mus_caroli.LT608237.1                                  I 14 C 0
s Mus_musculus.chr8                                       87650784 70 - 129401213 ------------------------------------------------------------------------t----ttttttccaatta--tGATT-A-T--TCA--A-G-GTGTGGT-------GCATC-C------------TTGTCTCTTCA-C--AC-A-TC-AAATCCTA---AT---------ATA---A
i Mus_musculus.chr8                                      I 13 C 0
s Mus_pahari.LT608297.1                                   31355440 70 -  89631738 ------------------------------------------------------------------------T----TTTCTTCCAATTA--TGATT-A-T--TCA--A-G-GTGTGGT-------GCATC-C------------TTGTCTCTTCC-C--AC-A-TG-GAATCCTA---AT---------ATA---A
i Mus_pahari.LT608297.1                                  I 11 C 0
s Mus_spretus.CM004101.1                                  90752846 70 - 130317789 ------------------------------------------------------------------------T----TTTTTTCCAATTA--TGATT-A-T--TCA--A-G-GTGTGGT-------GCATC-C------------TTGTCTCTTCC-C--AC-A-TC-AAATCCTA---AT---------ATA---A
i Mus_spretus.CM004101.1                                 I 14 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              5366 84 +     14296 CT-TC-----TT-------GAT------------T---------GTCC----------------------T-A----TTTCTACCAATTATTTGACT-TTT--TTA-AA-G-TGGTG-C-------A-ATC-T------------CAGTCTCTTCC-A--GA-CC-C-AATCC------AT---------GTG---C
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               301890 41 -  14710649 CT-TC-----TT-------GAC------------T---------GTCC----------------------T-A----TTTCTGCCAATCATATGGTG-A-T--TTA-------------------------------------------------------------------------------------------
i Mustela_putorius.JH418006.1                            C 0 I 39
s Myocastor_coypus.MyoCoy_scaffold_10123                     71673 74 -     80779 TC-TC-----TT-------GAC------------T---------GCCC----------------------T-A----TTTCTGCCAA-TGGTTGATTGT-G--TAA--A-G-CAGCG-C-------A-GTC-T------------CTGTCTT-AC--A--AC-CC-C-GAATC------------------------
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 I 7
s Myotis_brandtii.KE162005.1                                280903 85 -  10118263 CT-TC-----TC-------AAC------------C---------G--T----------------------T-A----TTTCTACCAATTGCATCGTT-A-T--TTAA-A-G-CATTG-T-------A-ATC-T------------CTGACTCTTTC-C--AGACC-C-AAATACCA---GG---------GTC---C
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1588159 85 -   6019432 CT-TC-----TC-------AAC------------T---------G--T----------------------T-A----TTTCTGCCAATTGCATGGTT-A-T--TTAA-A-G-CATTG-T-------A-ATC-T------------CTGACTCTTTC-C--AGACC-C-AAATACCA---GG---------GTC---C
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3904257 85 -   4330536 CT-TC-----TC-------AAC------------C---------G--T----------------------T-A----TTTCTACCAATTGCATTGTT-A-T--TTAA-A-G-CATTG-T-------A-ATC-T------------CTGACTCTTTC-C--AGACC-C-AAATACCA---GG---------GTC---C
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                         406 85 +      1835 CT-TC-----TC-------AAC------------T---------G--T----------------------T-A----TTTCTACCAATTGCATCGTT-A-T--TTAA-A-G-CATTG-T-------A-ATC-T------------CTGACTCTTTC-C--AGACC-C-AAATACCA---GG---------GTC---C
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189688 87 +    196477 CT-TC-----TT-------GAC------------T---------GTTT----------------------T-A----TTTGTGACAATGATAGGTTT-A-T--TTAA-A-G-CGGTG-T-------G-CCC-C------------CCAATTCTTCC-C--ACACC-T-GAAACCCA---AC---------ATG---C
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2034492 82 -   3037898 TT-TC-----AT-------GAC------------T---------GTCT----------------------T-A----TTTC----AATTATATGATT-A-T--TTA--A-AGTGCTG-T-------G-ATT-G------------CTGTCTCTTCC-C--AC-CC-C-AGATTCCA---AT---------GTG---A
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               15640 83 +     21681 TT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-G--T-GAATCCCA---GC---------GTG---C
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20307944 35 +  31847680 -------------------GAC------------T---------GTCC----------------------T-A----TTTCTGCCAGTtatatgatt-a-t--tta-------------------------------------------------------------------------------------------
i Neomonachus_schauinslandi.NINY01007730.1               I 6 I 40
s Noctilio_leporinus.NocLep_scaffold_251                    758319 87 +    783361 CT-TC-----TC-------AAC------------T---------GTCC----------------------C-A----TATCTACCAATTATAGAGTT-A-T--TTAA-A-G-TAGTG-T-------C-ATC-T------------CTGACTCTTTC-C--AGACC-C-AAAGGCCA---GC---------GTC---T
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149825 82 -   9404916 CT-TC-----TT-------GAC------------T---------ATCC----------------------T-A----TTTCTGCC-----TATGATT-A-T--TTAA-A-G-TGGTG-T-------A-ACC-T------------CTGACTCTTCC-C--ACAC-AT-AAATCCCA---AT---------GTA---C
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102586649 85 - 196305487 CC-TT-----TT-------GGC------------T---------ATAC----------------------T-A----GCTCTGCCAGTTATATGGTG-A-T--TCAA-A-G-TGGTA-C-------A-ATC-T------------CTGACTCTTCC-C--AC-C--C-AGATTACA---GT---------GTG---C
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              573 85 +      2075 CC-TT-----TT-------GGC------------T---------ATAC----------------------T-A----GCTCTGCCAGTTATATGGTG-A-T--TCAA-A-G-TGGTA-C-------A-ATC-T------------CTGACTCTTCC-C--AC-C--C-AGATTACA---GT---------GTG---C
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105762004 85 + 199412804 CC-TT-----TT-------GGC------------T---------ATAC----------------------T-A----ACTCTGCCAGTTATATGGTG-A-T--TCAA-A-G-TGATA-C-------A-ATC-T------------CTGACTCTTCC-C--AC-C--C-AGATTACA---GT---------GTG---C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1364291 86 +   3988456 cc-tc-----tt-------AAA------------T---------GTTC----------------------T-G----TTTCTGTCAATTACGTGGTT-A-T--TTAA-A-G-GAGTG-T-------G-ATC-T------------CTCACTCTTTC-C--AA-T-AC-CAATTCCA---GG---------ATA---A
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  747281 76 +  11899542 CC-TT-----TT-------GAC------------T---------GCCC----------------------T-A----TTTCTGCCAACTAGTTGATTGT-G--TAA--A-G-CAGTG-T-------A-GTT-T------------CTGTCTT-ACC-A--AC-CC-C-ATATC------------------------
i Octodon_degus.JH651603.1                               C 0 I 7
s Odobenus_rosmarus.KB229312.1                              507086 35 -   2017862 -------------------GAC------------T---------GTCC----------------------T-A----TTTCTGCCAGttatatgatt-a-t--tta-------------------------------------------------------------------------------------------
i Odobenus_rosmarus.KB229312.1                           I 3 I 40
s Ondatra_zibethicus.OndZib_scaffold_46174                   25550 82 +     28053 TT-CC-----TT-------GAC------------T---------GTAG----------------------T-A----TTTCTCCCAATTA--TGATT-A-T--TTA--A-G-CTGTGGT-------G-ATC-C------------C--TCTCTTCC-C--AC-T-TC-AAATCCCA---AT---------ATA---A
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    80559 82 +    102263 TT-TC-----TT-------GAT------------T---------GTAG----------------------T-A----TTTCTCCCAATTA--TGATT-A-T--TTA--A-G-CTGTGGT-------G-ATC-C------------T--TCTCTTCC-C--AC-C-TC-AAATCCCA---AT---------ATA---A
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 1
s Orycteropus_afer.OryAfe_flattened_line_144387              10531 86 -     18566 CT-TC-----TT-------TAC------------T---------ATTC----------------------T-A----TTTATGCAAATTATATGATT-A-T--TTAA-A-G-TGGCA-T-------A-ATC-T------------CTTAT-TTTCT-C--ACATC-T-TAATCCCA---AT---------GTG---A
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147767 86 + 174332312 CT-TC-----TT-------AAC------------T---------GTTC----------------------T-G----TTTCTGTCAATGAAATGAGT-A-T--TTAA-A-G-GGGTG-T-------G-ATC-T------------CTCACTCTTCC-C--AC-TC-T-GAACACCA---AT---------GTA---A
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462773 82 -    559221 CT-TC-----TT-------GAC------------T---------ATCC----------------------T-A----TTTCTGCC-----TATGATT-A-T--TTAA-A-G-TGGTG-T-------A-ACC-T------------CCGACTCTTCC-C--ACAC-AC-AAATCCCA---AT---------GTA---C
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4556 85 +      8798 CC-TT-----TT-------GGC------------T---------ATAC----------------------T-A----GCTCTGCCAATTATATGGCT-A-T--TCAA-A-G-TGGTA-C-------A-ATC-T------------CTGACTCTTCT-C--AC-C--C-AAAATCCA---GT---------GTG---C
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696719 85 -   1103335 CC-TT-----TT-------GGC------------T---------ATAC----------------------T-A----GCTCTGCCAATTATATGGCT-A-T--TCAA-A-G-TGGTA-C-------A-ATC-T------------CTGACTCTTCT-C--AC-C--C-AAAATCCA---GT---------GTG---C
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    44596 83 +     80009 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACTACATGTTT-A-T--AAAA-C-A-TGGAG-A-------C-A---T------------CTGACTCTTCC-C--AT-C--T-GAATCCCA---GC---------ATG---C
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189143497 83 + 189151597 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAActacatgttt-a-t--aaaa-c-a-tggaG-T-------C-A---T------------CTGACTCTTCC-C--AT-C--T-GAATCCCA---GC---------ATG---C
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  151600 70 +    230217 ------------------------------------------------------------------------A----TTTCTGCCAATTACACGATT-A-T--TTAA-A-G-CACTG-T-------A-ACG-T------------CTGACTCTTC--C--ACATC-C-A-ATTCCA---AC---------ATG---C
i Panthera_onca.PanOnc_flattened_line_3271               I 12 C 0
s Panthera_pardus.KV860321.1                                264809 70 +  18783137 ------------------------------------------------------------------------A----TTTCTGCCAATTACACGATT-A-T--TTAA-A-G-CAGTG-T-------A-ATG-T------------CTGACTCTTC--C--ACATC-C-A-ATTCCA---AC---------ATG---C
i Panthera_pardus.KV860321.1                             I 12 C 0
s Panthera_tigris.KE722367.1                               4721688 70 -   8748460 ------------------------------------------------------------------------A----TTTCTGCCAATTACACGATT-A-T--TTAA-A-G-CAGTG-T-------A-ATG-T------------CTGACTCTTC--C--ACATC-C-A-ATTCCA---AC---------ATG---C
i Panthera_tigris.KE722367.1                             I 12 C 0
s Papio_anubis.CM001495.2                                183443743 72 + 183742232 ---------------------------------------------TGC----------------------T-A----TTTCTGTCAACCACATGCTT-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------GTG---C
i Papio_anubis.CM001495.2                                I 9 C 0
s Papio_cynocephalus.k141_4307930                             7389 72 +     20448 ---------------------------------------------TGC----------------------T-A----TTTCTGTCAACCACATGCTT-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------GTG---C
i Papio_cynocephalus.k141_4307930                        I 9 C 0
s Papio_hamadryas.Contig39                                20564201 72 +  20919399 ---------------------------------------------TGC----------------------T-A----TTTCTGTCAACCACATGCTT-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------GTG---C
i Papio_hamadryas.Contig39                               I 9 C 0
s Papio_kindae.k141_1936966                                   6133 72 +     41871 ---------------------------------------------TGC----------------------T-A----TTTCTGTCAACCACATGCTT-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------GTG---C
i Papio_kindae.k141_1936966                              I 9 C 0
s Papio_papio.k141_802527                                     9426 72 +     27711 ---------------------------------------------TGC----------------------T-A----TTTCTGTCAACCACATGCTT-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------GTG---C
i Papio_papio.k141_802527                                I 9 C 0
s Papio_ursinus.k141_5274964                                   423 72 -     11374 ---------------------------------------------TGC----------------------T-A----TTTCTGTCAACCACATGCTT-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------GTG---C
i Papio_ursinus.k141_5274964                             I 9 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13088 84 -     78924 CT-TC-----TT-------CAC------------T---------CTTC----------------------T-A----T--CTGCCAATTACATGATT-A-T--TTAA-A-G-CAGTG-T-------A-ACA-T------------CTGACTCTTC--C--ACATC-C-AAATTCCA---GT---------GTG---C
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10532 97 +     13100 CC-TT-----TT-------GGC------------T---------ATAC----------------------T-A----GCTCTGCCAATTATATGGCT-A-T--TCAA-A-G-TGGTA-C-------T-CTT-TGAGCCATATATATTGACTCTTCC-G--AC-T--C-AAATTCCA---GT---------GTG---C
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             8938 85 +     25941 CC-TT-----TT-------GGC------------T---------ATAC----------------------T-A----GCTCTGCCAATTATATGGCT-A-T--TCAA-A-G-TGGTA-C-------A-ATC-T------------CTGACTCTTCC-G--AC-T--C-AAATTCCA---GT---------GTG---C
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18195184 82 -  18517816 TT-TC-----TT-------GAC------------T---------GTAG----------------------T-A----CTTCTCCCAATTA--TAATT-A-T--TTA--A-G-GTGTGGT-------G-acc-c------------c--tctctccc-c--at-c-tc-taaTTCCA---AT---------ATA---A
i Peromyscus_maniculatus.KI615324.1                      C 0 I 1
s Petromus_typicus.PetTyp_scaffold_42190                     28547 94 -     29689 CT-TC-----TC-------AGT------------T---------GCCC----------------------T-A----TTTCTGCCAATTAGATAATTTT-T--TAA-AA-A-CAGCA-T-------A-GTA-T------------TTGTCTTTCCC-T--AC-CC-C-AAATCCCA---GAGTGCAGTTAG-----C
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Piliocolobus_badius.k141_1234363                           44131 83 +     62158 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------GTG---C
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        38878 83 +     89929 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------GTG---C
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40294 83 +     51399 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------GTG---C
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296532 83 -  14605196 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------GTG---C
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2208 73 +     22620 ----------------------------------------------------------------------T-A----CTTCTGCCAATTGCATCGTT-A-T--TTAA-A-G-CAGTG-T-------A-ATC-T------------CGGACTCTTTC-C--AGACC-C-AAATACCA---GG---------ATC---C
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 10 C 0
s Pongo_abelii.CM009266.2                                189131635 83 + 189387572 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACTACATGCTT-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGACTCTTCC-C--AT-C--T-GAATCCCA---GC---------ATG---C
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9571242 83 +   9816681 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACTACATGCTT-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGACTCTTCC-C--AT-C--T-GAATCCCA---GC---------ATG---C
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               73816 83 -     81375 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------GTG---C
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              5636 83 +     19060 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------GTG---C
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 13774 70 -     22811 CT-TT-----TT-------GAC------------A---------ATTC----------------------C-A----TTTCCTCCCATGACCTGCTT-A-T--TTAA-A-G-TGGCA-C-------A-AAC-T------------CGGAT-CTCCC-T--ACCC---------------------------------
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 I 15
s Prolemur_simus.MPIZ01000396.1                            2597170 86 -   4620579 CT-TT-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGCCAATTATACGACT-A-T--TTAA-A-G-TGGCG-C-------A-ATC-T------------CTGACTCTTCC-C--AC-C--CCAAATTCCA---GT---------GTG---C
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     991156 86 +   2598838 CT-TT-----TT-------GAC------------T---------GTGC----------------------C-A----TTTCTGCCAATTATACGATT-A-T--TTAA-A-G-TGGTG-C-------A-ATC-T------------CTGATTCTTCC-T--AC-C--CTGAATTCTA---GT---------GTG---C
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29468 86 +     38485 CT-TT-----TT-------GAC------------T---------GTGC----------------------C-A----TTTCTGCCAATTATACGATT-A-T--TTAA-A-G-TGGTG-C-------A-ATC-T------------CTGATTCTTCC-T--AC-C--CTGAATTCCA---GT---------GTG---C
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1511 85 -     13098 CT-TT-----TT-------GAC------------T---------GTGC----------------------C-A----TTTCTGCCAATTATACAA-T-A-T--TTAA-A-G-TAGTG-C-------A-ATC-T------------CTGATTCTTCC-C--AC-C--CTGAATTCCA---GT---------GTG---C
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          26989 86 +     35766 CT-TT-----TT-------GAC------------T---------GTGC----------------------C-A----TTTCTGCCAATTATACGATT-A-T--TTAA-A-G-TGGTG-C-------A-ATC-T------------CTGATTCTTCC-T--AC-C--CTGAATTCCA---GT---------GTG---T
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           5176 86 -     24134 CT-TT-----TT-------GAC------------T---------GTGC----------------------C-A----TTTCTGCCAATTATACGATT-A-T--TTAA-A-G-TGGTG-C-------A-ATC-T------------CTGATTCTTCC-T--AC-C--CTGAATTCCA---GT---------GTG---C
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        29001 86 -     67325 CT-TT-----TT-------GAC------------T---------GTGC----------------------C-A----TTTCTGCCAATTATACGATT-A-T--TTAA-A-G-TGGTG-C-------A-ATC-T------------CTGATTCTTCC-T--AC-C--CTGAATTCTA---GT---------GTG---C
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           5224 86 -      6182 CT-TT-----TT-------GAC------------T---------GTGC----------------------C-A----TTTCTGCCAATTATACGATT-A-T--TTAA-A-G-TGGTG-C-------A-ATC-T------------CTGATTCTTCC-T--AC-C--CTGAATTCCA---GT---------GTG---C
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            10814 84 -     21651 TT-TC-----GT-------GAC------------T---------GTCA----------------------T-A----ATTTTCCCAATTA--TGATT-A-T--TTA--A-G-GTGTAGT-------G-A-GCC------------CTGTCTCTTCC-C--AT-A-TC-AAATCCCA---AT---------ATA---A
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            15511 87 -     21811 CT-TC-----TC-------CAC------------T---------GTCC----------------------C-A----TTTCTACCAATTACAGAGTT-A-T--CTGA-A-G-GAGCG-T-------G-ATC-T------------CTGACTCTTCG-C--AGACC-T-GAATCCCA---GG---------GTG---C
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40670 41 +     42204 CT-TC-----TT-------GAC------------T---------GTCC----------------------T-A----TTTCTGCCAATCATATGATT-A-T--TTA-------------------------------------------------------------------------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 39
s Pteropus_alecto.KB030862.1                              22977241 48 +  28871421 --------------------------------------------------------------------------------------------------------TAA-A-G-TGGTG-T-------A-ATC-T------------CTGACTCTTTA-C--GGAC-TC-AAATCCTA---AA---------GTA---C
i Pteropus_alecto.KB030862.1                             I 35 C 0
s Pteropus_vampyrus.KN534172.1                                7294 48 -      8028 --------------------------------------------------------------------------------------------------------TAA-A-G-TGGTG-T-------A-ATC-C------------CTGACTCTTTA-C--GGAC-TC-AAATCCTA---AA---------GTA---C
i Pteropus_vampyrus.KN534172.1                           I 35 C 0
s Puma_concolor.QAVW01001104.1                            20274744 85 -  38429054 CT-TC-----TT-------CAC------------T---------CTCC----------------------T-A----TTTCTGCCAATTACACGATT-A-T--TTAA-A-G-CAGTG-T-------A-ACG-T------------CTGACTCTTC--C--ACATC-C-A-ATTCCA---AC---------ATG---C
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15622 83 -     91421 CT-TC-----TT-------GAC------------T---------GTGT----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-G--T-GAATCCCA---GC---------GTG---C
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7609742 83 +   7812017 CT-TC-----TT-------GAC------------T---------GTGT----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-G--T-GAATCCCA---GC---------GTG---C
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             15621 83 -     72585 CT-TC-----TT-------GAC------------T---------GTGT----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-G--T-GAATCCCA---GC---------GTG---C
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53571066 48 +  90668790 -------------------------------------------------------------------------------------------------------TTA--A-G-GTGTAGT-------G-ATc-c------------ttgtctcttcc-c--ac-a-tc-aaaTCCTA---AT---------ATA---A
i Rattus_norvegicus.chr16                                I 29 C 0
s Rhinopithecus_bieti.k119_217274                             7332 83 -     11128 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-G--T-GCATCCCA---GC---------GTG---C
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236681 83 - 195417433 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-G--T-GCATCCCA---GC---------GTG---C
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672337 83 +   7961872 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-G--T-GCATCCCA---GC---------GTG---C
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88243 87 -     96226 CT-TA-----TC-------GAC------------C---------GTCC----------------------T-A----TTTCTGTCAATTACATGGTT-A-T--TTAA-A-G-TGGTG-T-------A-ATC-T------------CTGACTCTTTC-C--GGAC-TC-AAATTTCA---AA---------GCA---C
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_8081                                   784 83 +     42994 CT-TC-----TT-------TAC------------T---------GTGC----------------------T-A----GTTCTGTCAATTATATGCTT-A-T--AAAA-C-A-TGGTG-T-------C-A---T------------CTGACTCTTCC-C--AC-C--C-GAATCCCA---GG---------GTG---C
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_57697                                569 83 +      1030 CT-TC-----TT-------TAC------------T---------GTGC----------------------T-A----GTTCTGTCAATTACATGCTT-A-T--AAAA-C-A-TGGTG-T-------C-A---T------------CTGACTCTTCC-C--AC-C--C-GAATCCCA---GG---------GTG---C
i Saguinus_imperator.k141_57697                          C 0 C 0
s Saguinus_inustus.k141_3945547                                648 83 -      8737 CT-TC-----TT-------TAC------------T---------GTGC----------------------T-A----GTTCTGTCAATTATATGCTT-A-T--AAAA-C-A-TGGTG-T-------C-A---T------------CTGACTCTTCC-C--AC-C--C-GAATCCCA---GG---------GTG---C
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_midas.LG03                                    209470135 83 + 209938924 CT-TC-----TT-------TAC------------T---------GTGC----------------------T-A----GTTCTGTCAATTATATGCTT-A-T--AAAA-C-A-TGGTG-T-------C-A---T------------CTGACTCTTCC-C--AC-C--C-GAATCCCA---GG---------GTG---C
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 8770 83 -      9399 CT-TC-----TT-------TAC------------T---------GTGC----------------------T-A----GTTCTGTCAATTATATGCTT-A-T--AAAA-C-A-TGGTG-T-------C-A---T------------CTGACTCTTCC-C--AC-C--C-CAATCCCA---GG---------GTG---C
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951504 78 - 121099817 CT-TC-----TT-------TAT------------T---------GTGC----------------------T-A----TTTCTGtcaattatacattt-a-t--aaag-c-a-TGGTG-T-------T-G---T------------CTGACTCTTCC-C--AC-C--C-GAACCCCT---G-----------------
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23846 78 +     46362 CT-TC-----TT-------TAC------------T---------GTGC----------------------T-A----TTTCTGTCAATTATACATTT-A-T--AAAG-C-A-TGGTG-T-------T-G---T------------CTGACTCTTCC-C--AC-C--C-GAACCCCT---G-----------------
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               23941 78 +     45824 CT-TC-----TT-------TAC------------T---------GTGC----------------------T-A----TTTCTGTCAATTATACATTT-A-T--AAAG-C-A-TGGTG-T-------T-G---T------------CTGACTCTTCC-C--AC-C--T-GAACCCCT---G-----------------
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             40620 78 -     64574 CT-TC-----TT-------TAC------------T---------GTGC----------------------T-A----TTTCTGTCAATTATACATTT-A-T--AAAG-C-A-TGGTG-T-------T-G---T------------CTGACTCTTCC-C--AC-C--C-GAACCCCT---G-----------------
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               3693 78 -     23631 CT-TC-----TT-------TAC------------T---------GTGC----------------------T-A----TTTCTGTCAATTATACATTT-A-T--AAAG-C-A-TGGTG-T-------T-G---T------------CTGACTCTTCC-C--AC-C--C-GAACCCCT---G-----------------
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 23837 78 -     61129 CT-TC-----TT-------TAC------------T---------GTGC----------------------T-A----TTTCTGTCAATTATACATTT-A-T--AAAG-C-A-TGGTG-T-------T-G---T------------CTGACTCTTCC-C--AC-C--C-GAACCCCT---G-----------------
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5421210 78 -   5703754 CT-TC-----TT-------TAC------------T---------GCGC----------------------T-A----TTTCTGTCAATTATACGCTT-G-T--AAAA-C-A-TGGCG-T-------C-C---T------------CTGACTCTTCC-C--AC-C--A-GAATCCCT---C-----------------
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          56451 78 -     80660 CT-TC-----TT-------TAC------------T---------GCGC----------------------T-A----TTTCTGTCAATTATACGCTT-G-T--AAAA-C-A-TGGCG-T-------C-C---T------------CTGACTCTTCC-C--AC-C--A-GAATCCCT---C-----------------
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153621 36 -    313613 CT-TC-----TC-------CAC------------T---------GTAC----------------------T-A----TTTCTGCCAATTAAGTGAGT----------------------------------------------------------------------------------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 39
s Semnopithecus_entellus.k141_1672505                          513 83 -     12572 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------ATG---C
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27363 83 +     39453 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------ATG---C
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            7881 83 +     27826 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------ATG---C
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             7403 83 -     19483 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------ATG---C
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                       704 83 -     12762 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------ATG---C
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                            565 83 +     13763 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAG-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------ATG---C
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                      716 79 -     30804 ----C-----AT-------AAC------------T---------ACAG----------------------T-A----TTTCTCCTAATTA--TAATT-A-T--TTA--A-G-TTGTGGT-------G-ATA-C------------T--TCTCTTCC-C--AC-T-TC-AAATCCCA---AT---------ACA---A
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               4196 85 +   1910179 CT-TA-----TT-------GAC------------T---------AT-C----------------------A-A----TGCCTGTCA-TTCTACGATT-C-T--TTAG-A-G-TGGTG-T-------A-ATC-T------------CTGGCTGTTCA-G--ATACC-C-CGCACCCA---CA---------GTT---C
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13651445 43 -  18376816 CT-TC-----TTGAAGTTAAGC------------T---------GT-C----------------------CTATTTCTTCCAGTGA-TACTATT-------------------------------------------------------------------------------------------------------
i Sorex_araneus.JH798187.1                               C 0 I 45
s Spermophilus_dauricus.KZ294078.1                         1954370 44 -   3870691 ct-ttttt--tt-------aac------------t---------gccC----------------------T-A----TTTCTGCCAATaatatcatt-a-t--tca-------------------------------------------------------------------------------------------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 34
s Spilogale_gracilis.SpiGra_flattened_line_13525             31167 35 +     97271 -------------------GAC------------T---------ATCC----------------------T-A----TTTCTGTTAGTTATATGGTT-A-T--TTA-------------------------------------------------------------------------------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 4 I 39
s Suricata_suricatta.SurSur_flattened_line_6629              18761 86 -    196729 CT-TC-----TT-------CAC------------T---------GTCC----------------------T-A----TTTCTGCCAATTACATGATT-C-C--TTAA-A-G-CACTG-T-------A-ACA-G------------GTGACCCTTC--C--ACATC-C-AAATTGCG---AT---------GCG---T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6811243 87 +  69701581 ct-tc-----tg-------GGC------------T---------GCCC----------------------T-A----TTTCTACCAATAATACGGTT-A-T--TTAA-A-G-TACTG-T-------A-ATA-G------------CTGCCTCCGCC-C--AGACC-T-AAATCCCA---AG---------GGG---C
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                11250 86 +     41958 CT-TC-----TC-------AAC------------T---------GTGT----------------------T-A----TTTCTACCAATGATATAGTT-A-T--TTAA-A-G-TAGTG-T-------A-ATC-T------------CTGACTGTTTC-C--AAACC-T--AATCCCA---AT---------GTC---C
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73047 87 +    116680 CT-TC-----TT-------GAC------------T---------GTCT----------------------T-A----TTTCTGACAATGATATGTTT-A-T--TTAA-A-G-TGGTG-T-------A-CCC-C------------CCAACTCTTCC-C--ACACC-T-GAAACCCA---AC---------ATG---C
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      119223 86 -    156842 CT-TC-----TC-------TAC------------T---------GTCC----------------------T-G----TTTCTGCCAATTATGTGGGT-A-T--TTAA-A-G-TGGCA-T-------C-ACC-A------------CTGACTGTTCC-C--ACAC--T-GAATCCCA---GT---------GTG---C
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387668 86 +    539355 CT-TC-----TC-------TAC------------T---------GTCC----------------------T-G----TTTCTGCCAATTATGTGGGT-A-T--TTAA-A-G-TGGTG-T-------C-ATC-T------------CTGACTGTTCC-C--ACAC--T-GAATCCCA---GT---------GTG---C
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               26906 84 +     70052 CT-TC-----TA-------GAC------------T---------GTGC----------------------T-A----TTTCTGCCAGTTATGTGATC-T-C--GGAA-A-G-CAGCG-T-------C-ATC-C------------CTGACTCTTCC-C--TT-C--C-AAGTCCCA---GC---------AGG----
i Tarsius_lariang.k141_2201908                           C 0 I 7
s Tarsius_wallacei.k141_254427                                1703 84 -     16117 CC-TC-----TA-------GAC------------T---------GTGC----------------------T-A----TTTCTGCCAGTTATGTGATC-T-C--GGAA-A-G-CAGCG-T-------C-ATC-C------------CTGACTCTTCC-C--TT-C--C-AAGTCCCA---AC---------AGG----
i Tarsius_wallacei.k141_254427                           C 0 I 7
s Theropithecus_gelada.CM009954.1                        186429061 72 + 186847797 ---------------------------------------------TGC----------------------T-A----TTTCTGTCAACCACATGCTT-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------GTG---C
i Theropithecus_gelada.CM009954.1                        I 9 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105864 63 +    114563 CT-TC-----TC-------AAC------------T---------GCCC----------------------T-A----TTTCTGCCAATTAGATGATTAT-T--TAA--A-G-CAATA-T-------A-GTA-T------------CTGTCTCT--------------------------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 23
s Tolypeutes_matacus.TolMat_scaffold_228639                   6851 33 +      8208 ------------------------------------------------------------------------A----CTTCTGACAATGATATGATC-A-T---TAA-A-G-CGGTG--------------------------------------------------------------------------------
i Tolypeutes_matacus.TolMat_scaffold_228639              I 14 I 23
s Tonatia_saurophila.TonSau_scaffold_294                     81630 83 +    610378 CT-TC-----TC-------AAC------------T---------GTCT----------------------T-A----TTTCTACCAATTATACAGTT-A-C--TTAA-A-G-TAGTG-G-------A-ATC-T------------CTGACT----C-C--AGACC-C-AAATCCCA---AA---------GCC---C
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         11454 83 -     20410 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------ATG---C
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                       568 83 -     12674 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------ATG---C
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       11555 83 +     19930 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------ATG---C
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       7966 83 -     19997 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------ATG---C
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48105 83 -     60166 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------ATG---C
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        15577 83 -     27529 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------ATG---C
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     15521 83 -     18194 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------ATG---C
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9233 83 -     21137 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------ATG---C
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    7936 83 -     10723 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------ATG---C
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7108 83 +      9834 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------ATG---C
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        25421 83 +     32220 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------ATG---C
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5939523 83 +   6242583 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------ATG---C
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        8774 83 +     20839 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGTCAACCACATACTG-A-T--AAAA-C-A-TGGAG-T-------C-A---T------------CTGATTCTTCC-C--AT-C--T-GAATCCCA---GC---------ATG---C
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4293676 84 +  10818551 CT-TC-----TT-------GAC------------T---------ATTC----------------------C-A----TTTCCTCCAGTGATCTGATT-A-T--TTAA-A-G-TGGCA-G-------A-AAC-T--------------GAT-CTCCC-T--ACACC-T-GAATCCCA---AT---------GTG---A
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2156240 86 +   4065304 CT-TC-----CT-------GAC------------T---------GTCC----------------------C-A----TTTCTGCGAATTACATGATT-A-T--TGAA-A-G-CTGTA-C-------G-GTC-T------------CTGCCTCTTCC-C--GG-CC-C-GGATCCTC---AT---------GGG---C
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9683 86 -     10553 CT-TC-----CT-------GAG------------T---------GTCC----------------------C-A----TTTCTGCCAATTACATGATT-A-T--TGAA-A-G-TTGTA-C-------A-GTC-T------------CTGCCTCTTCC-C--GG-CC-C-AGATCCTC---AT---------GAG---C
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   53762 45 -     77625 ----------------------------------------------------------------------------------------------------A--TTAC-C-T-CAGTA-T-------C-ATC-T------------CTGG----TCC-C--ATACC-C-ACACTCCA---AA---------GT----C
i Uropsilus_gracilis.UroGra_scaffold_12083               I 36 C 0
s Ursus_maritimus.KK499267.1                               4850874 41 -   5085361 CT-TC-----TT-------GAC------------T---------ATCC----------------------T-A----TTTCTGccaattatatgatt-t-t--tta-------------------------------------------------------------------------------------------
i Ursus_maritimus.KK499267.1                             C 0 I 40
s Varecia_rubra.k141_590885                                  11835 86 +     50397 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGCCAATTATACGATT-A-T--TTAA-A-G-CAGAG-C-------A-ATC-T------------CTGACTCTTCC-C--AC-C--CCGAATTCCA---GT---------GTG---C
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11894 86 +     24756 CT-TC-----TT-------GAC------------T---------GTGC----------------------T-A----TTTCTGCCAATTATACGATT-A-T--TTAA-A-G-CAGAG-C-------A-ATC-T------------CTGACTCTTCC-C--AC-C--CCGAATTCCA---GT---------GTG---C
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5372322 86 -   5488506 CT-TC-----TC-------AGC------------T---------GCCC----------------------T-A----TTTCTACCAATTATATGGTT-A-T--TTAA-A-G-CAATG-T-------A-ATC-T------------CCAACTTTTCT-C--AG-CC-C-AAATCACA---AT---------GTG---C
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 11225 82 -     43706 CT-TC-----TT-------GAC------------C---------ATCC----------------------T-A----TTTCTGCC-----TATGATT-A-T--TTAA-A-G-TGGTG-T-------A-ACC-T------------CTGACTCTTCC-C--ACAC-AC-AAATCCCA---AT---------GTA---C
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          1494 75 +    224448 CT-TT-----TT-------GAT------------T---------ATCC----------------------T-A----TTTTTGACAATAATATGATT-A-T--TCA-AA-G-CATTG-T-------G-ATC-T------------CTGCCTCTTGC-C--TC-CC-C-AAA--------------------------
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      15319 86 +     63895 CT-TC-----TT-------GGC------------T---------GTCC----------------------T-G----TTTCTCTCAATTATATTGTA-A-T--TTA--AAG-TGATG-C-------T-CTC-T------------CTGTCTCTTCC-C--AC-CC-C-AAATGCCA---AA---------ATG---T
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Saguinus_labiatus.k141_285685                               8505  5 +      8564 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 50546  0 +     63868 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       7336 19 +     62944 A-GTCAG---C---T-CCC-AG---CC-----C---T-CC
s Acinonyx_jubatus.LLWD01001279.1                           827822 20 -   1699592 C-ATCAG---C---TCCCC-AA---CC-----C---T-TC
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     71303 20 +     87051 A-ATCAT---T---TTCTG-CC---CC-----C---T-CC
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511094 20 -  29979442 A-ATCAG---C---TACCC-AA---CC-----C---T-CC
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 40 C 0
s Ailurus_fulgens.LNAC01001112.1                             79864 20 -    347723 A-ATTAG---C---TACCC-AA---CC-----C---T-GT
i Ailurus_fulgens.LNAC01001112.1                         I 38 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     75005 20 -     89534 A-GGGAG---C---TATCC-AG---CT-----C---T-TC
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   15264 19 -     52922 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15180 19 -     28001 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          5678 19 -     18505 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           6530 19 -     12518 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              8125 19 +     51355 A-GGCAG---C---T-CCC-AG---CC-----C---T-CC
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                1234 19 -     36483 A-GGCAG---C---T-CCC-AG---CC-----C---T-CC
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              11683 19 +     28687 A-GGCAG---C---T-CCC-AG---CC-----C---T-CC
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                  199 19 +     27940 A-GGCAG---C---T-CCC-AG---CC-----C---T-CC
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            1243 19 -      9457 A-GGCAG---C---T-CCC-AG---CC-----C---T-CC
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                              199 19 +     30492 A-GGCAG---C---T-CCC-AG---CC-----C---T-CC
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              4194 19 +     47717 A-GGCAG---C---T-CCC-AG---CC-----C---T-CC
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                               926 19 +      5663 A-GGCAG---C---T-CCC-AG---CC-----C---T-CC
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             15378 19 +     50774 A-GGCAG---C---T-CCC-AG---CC-----C---T-CC
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185867 17 +    412891 G-ATCAG---C---TACCC-AA---AC-----C-------
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  16125 19 -     33861 A-GGCAG---C---T-CCC-AG---CC-----C---T-CC
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            16171 19 -     34016 A-GGCAG---C---T-CCC-AG---CC-----C---T-CC
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4298549 19 -   5030052 A-GGCAG---C---T-CCC-AG---CC-----C---T-CC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             16158 19 -     34685 A-GGCAG---C---T-CCC-AG---CC-----C---T-CC
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               29283 19 -     47192 A-GGCAG---C---T-CCC-AG---CC-----C---T-CC
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13112 18 +     20879 ---TCAG---C---TCCCC-AA---CC-----C---T-CC
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       11973 19 +     14667 A-GTCAG---C---A-CTC-TG---CC-----C---C-TC
i Arctocebus_calabarensis.k141_2318572                   C 0 I 1
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5257 17 +     43469 G-ATCAG---C---TACCC-AA---AC-----C-------
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  54208  6 -     92717 A-GTCAG---------------------------------
i Avahi_laniger.k141_765380                              C 0 I 3
s Avahi_peyrierasi.k141_1424874                              54829 19 +     85213 A-GTCAG---C---T-CTC-TG---CC-----C---C-TC
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             5972 19 -     10423 A-GGCAG---C---T-CCC-AG---CC-----C---T-CC
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             25441 19 +     31915 A-GGCAG---C---T-CCC-AG---CC-----C---T-CC
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23591126 19 - 189096842 A-GGCAG---C---T-CCC-AG---CC-----C---T-CC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                               525 19 -     12329 A-GGCAG---C---T-CCC-AG---CC-----C---T-CC
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002875  3 -  17673402 A-AT------------------------------------
i Camelus_bactrianus.KN276810.1                          C 0 I 6
s Camelus_dromedarius.KN272107.1                           2335351  3 -   7040546 A-AT------------------------------------
i Camelus_dromedarius.KN272107.1                         C 0 I 6
s Camelus_ferus.KB017975.1                                  403648  3 -   1652518 A-AT------------------------------------
i Camelus_ferus.KB017975.1                               C 0 I 6
s CanFam4.chr16                                           17799684 20 -  60362399 A-ATCAG---C---TACTC-AA---CC-----C---T-TC
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                      432 20 -     43241 A-ATCAG---C---TACTC-AA---CC-----C---T-TC
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9035127 20 -   9314153 A-ATCAG---C---TACTC-AA---CC-----C---T-TC
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17959603 20 -  59632846 A-ATCAG---C---TACTC-AA---CC-----C---T-TC
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18500900 20 +  63665305 A-ATCAG---C---TACTC-AA---CC-----C---T-TC
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1556 13 -     12242 --------------CATCT-AA---TC-----T---T-TC
i Capromys_pilorides.CapPil_scaffold_65020               I 7 C 0
s Carlito_syrichta.NW_007259797.1                           156505  5 -    496798 ----------------CCC-AG------------------
i Carlito_syrichta.NW_007259797.1                        I 7 I 4
s Carollia_perspicillata.CarPer_scaffold_92756                5622 17 -     11696 G-ATCAG---C---CACCC-AA---AC-----C-------
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137596 23 +    179628 A-GTCTGCTGC---TACCC-AG---TC-----C---T-TC
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     93583 16 +    217609 A-GTAAG---C---TACCC-AG---CC-------------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 1
s Cebuella_niveiventris.k141_1251222                         10607 19 -     11392 A-GGCAG---C---T-CCC-AG---CC-----C---T-CC
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               6674 19 -      7577 A-GGCAG---C---T-CCC-AG---CC-----C---T-CC
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         6003  5 +     31688 ----------------CCC-AG------------------
i Cephalopachus_bancanus.k141_1423433                    I 7 I 4
s Ceratotherium_simum.JH767749.1                          12231970 20 +  27778364 A-GTCAG---C---TGCCC-AG---C-----TC---T-TC
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           2997 20 -     25243 A-GTCAG---C---GGCCC-AG---C-----TC---T-TC
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4476195 19 +   4669795 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                         697 19 +     17872 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           1354 19 -     14043 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9387 19 +     27781 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         9555 19 -     20310 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          12535 19 +     29689 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7285 19 -     20078 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          15203 19 -     27936 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            4073 19 -     17152 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38817614 19 +  39242232 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223304 18 -  21565898 A-GTCGG---C---T-CCC-AG----C-----C---T-CC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40422 19 -     53127 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                         673 19 +     13442 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15222 19 -     27947 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         15198 19 +     17596 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          1245 19 +     14005 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1024 14 -      8501 ----------------CTA-GCCAGCC-----C---T-GC
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       I 18 C 0
s Cheirogaleus_major.k141_333249                             21578 19 -     52598 A-ATCAG---C---T-CTC-TG---CC-----C---C-TC
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16943 19 +     57038 A-GTCAG---C---T-CTC-TG---CC-----C---C-TC
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1253430 13 +   2543920 --------------TGCCT-CA---TG-----T---T-TT
i Chinchilla_lanigera.JH722012.1                         I 7 C 0
s Chiropotes_albinasus.k141_2206961                            873 19 -     15524 A-GGCAG---C---T-CCC-AG---CC-----C---T-CC
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18429182 19 -  18827391 A-GTCGG---C---T-CCC-AG---CC-----C---T-TC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15619 19 -     50209 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422619 19 + 135778131 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 18822 24 +     19366 A-ATAGG---C---TACCCAACCAGCC-----C---T-TC
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            173899 24 +    839153 A-ATAGG---C---TACCCAACCAGCC-----C---T-TC
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1911132 19 +   2368649 A-GTCGG---C---T-CCC-GG---CC-----C---T-CC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949384 19 + 200372422 A-GTCGG---C---T-CCC-GG---CC-----C---T-CC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37666 19 +     84244 A-GTCGG---C---T-CCC-GG---CC-----C---T-CC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17548585 25 -  53390261 A-GTCAG---C---TACCC-CA---TTCAGCTC---T-GC
i Condylura_cristata.JH655891.1                          I 45 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14924 18 -     20389 A-AGGAG---C---TAGCA-AA---AC-----C---C---
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 50546 10 +     63868 ----------T---TATCA-GA---AC-------------
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 1
s Cricetulus_griseus.LT883664.1                           11668059 16 + 224834208 A-ATTAT---T---CACTA-GA---CA-------------
i Cricetulus_griseus.LT883664.1                          I 18 I 1
s Crocidura_indochinensis.CroInd_scaffold_37019               3491 11 -     19598 -------------------------TTCAGTTC---T-TC
i Crocidura_indochinensis.CroInd_scaffold_37019          I 43 I 18
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29010 20 -     87169 C-ATCAG---C---TATCC-AA---CC-----C---T-TC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837588 20 +   1526836 A-ATGCC---A---TACCC-AG---TC-----T---C-TC
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 32 C 0
s Dasypus_novemcinctus.JH564415.1                            64038 23 +   2246927 A-ATGAG---C---TACTC-ACCAACC-----C---T-TC
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537800 19 -  12879189 A-GGcag---c---t-ctc-tg---cc-----c---c-tc
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630638 17 +  20541912 T-GTCAG---C---TACCC-AA---AC-----C-------
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673819 20 +   1390856 A-GTCAG---C---TGCCC-AG---C-C----C---T-TC
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6570 20 +    198055 A-GTCAG---C---TGCCC-AG---C-----TC---T-TC
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36919 13 +     67921 --------------CATCT-AA---TC-----T---T-TT
i Dinomys_branickii.DinBra_scaffold_21862                I 7 C 0
s Echinops_telfairi.JH980293.1                            48781108 12 + 111700974 A-ATCAG---C---TGCCC---------------------
i Echinops_telfairi.JH980293.1                           I 39 I 8
s Eidolon_helvum.KE759718.1                                  11049 20 +     11740 A-ATCAG---C---TACCC-GA---AC-----C---T-TT
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1098285 12 +  10337057 A-ATCAG---T---TGCCC---------------------
i Elephantulus_edwardii.JH947257.1                       C 0 I 8
s Ellobius_lutescens.LOEQ01008920.1                          21010 16 -    110024 a-ATCAT---T---CACTA-GA---CC-------------
i Ellobius_lutescens.LOEQ01008920.1                      I 227 I 1
s Ellobius_talpinus.LOJH01081419.1                             914 16 +      8657 A-ATCAT---T---CACTA-GA---CC-------------
i Ellobius_talpinus.LOJH01081419.1                       C 0 I 1
s Enhydra_lutris.KZ291758.1                               16329821 20 -  41312741 A-ATCAG---C---TACCC-AA---CC-----C---T-GC
i Enhydra_lutris.KZ291758.1                              I 39 C 0
s Eptesicus_fuscus.JH977646.1                              2146247 20 -  14770903 A-ATCAG---C---TACCC-AA---TC-----C---T-TC
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1284078 20 +   4378816 a-atcag---c---tgccc-ag---cc-----c---t-tc
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18531898 20 -  39960074 a-atcag---c---tgccc-ag---cc-----c---t-tc
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               33927 20 +    498745 a-atcag---c---tgccc-ag---cc-----c---t-tc
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3328760 20 -   7059049 A-TTCAG---C---TGCCC-TA---C--A---C---T-TC
i Erinaceus_europaeus.JH835339.1                         I 69 C 0
s Erythrocebus_patas.Contig38                             21205787 19 -  21539334 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_576796                              40623 19 -     44621 A-GTCAG---C---T-CTC-TG---TC-----C---C-TC
i Eulemur_albifrons.k141_576796                          C 0 C 0
s Eulemur_collaris.k141_377015                                7004 19 -     16928 A-TTCAG---C---T-CTC-TG---TC-----C---C-TC
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              16036 19 -     25546 A-GTCAG---C---T-CTC-TG---TC-----C---C-TC
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            13232 19 +     26330 A-GTCAG---C---T-CTC-TG---TC-----C---C-TC
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14467 19 +     23973 A-GTCAG---C---T-CTC-TG---TC-----C---C-TC
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                13229 19 +     75513 A-GTCAG---C---T-CTC-TG---TC-----C---C-TC
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 11159 19 +     97555 A-GTCAG---C---T-CTC-TG---TC-----C---C-TC
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              650 19 +     13026 A-GTCAG---C---T-CTC-TG---TC-----C---C-TC
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4703 19 -     17153 A-TTCAG---C---T-CTC-TG---TC-----C---C-TC
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              14276 19 +    111500 A-GTCAG---C---T-CTC-TG---TC-----C---C-TC
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237464 20 + 206538554 C-ATCAG---C---TCCCC-AA---CC-----C---T-TC
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20196307 20 + 205367284 C-ATCAG---C---TCCCC-AA---CC-----C---T-TC
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 10060 20 -     36744 C-ATCAG---C---TCCCC-AA---CC-----C---T-TC
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             850955 13 +   3816255 --------------tgcct-cc---tc-----t---t-tc
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg2040                                     427121 19 -    453645 A-GTCAG---C---A-CTC-TG---GC-----C---C-TC
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4811 19 +     11339 A-GTCAG---C---A-CTC-TG---GC-----C---C-TC
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            2109 19 +     41679 G-GTCAG---C---A-CTC-TG---CC-----C---C-TC
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1709 23 -      9135 C-ATCAG---CAGCTGCCC-AG---CC-----C---T-GC
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            31879 20 +     49224 A-ATCAG---C---TACCC-AA---CC-----C---T-TG
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              16591 19 -     32273 A-GTCAG---C---T-CCC-AG---CC-----C---T-CC
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186338727 19 + 186649187 A-GTCAG---C---T-CCC-AG---CC-----C---T-CC
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33124 20 +     78134 A-ATCAG---C---TACCC-AA---CC-----C---T-CC
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           7335  8 -     19426 A-GTCAA---C---T-------------------------
i Hapalemur_alaotrensis.k141_170648                      C 0 I 7
s Hapalemur_gilberti.k141_488810                             12484 19 -     15286 A-GTCAA---C---T-CTC-TG---TC-----C---C-TC
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             14123 19 +     18253 A-GTCAA---C---T-CTC-TG---TC-----C---C-TC
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         14224 19 -     41752 A-GTCAA---C---T-CTC-TG---TC-----C---C-TC
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         14061 19 -     16460 A-GTCAA---C---T-CTC-TG---TC-----C---C-TC
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242844 20 +    327341 C-ATCAG---C---TACCC-AA---CC-----C---T-TC
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20662712 13 +  22651954 --------------tgcct-aa---ct-----t---a-tc
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1404 12 +      7595 A-ACCAG---C---TACCC---------------------
i Heterohyrax_brucei.HetBruBak_scaffold_122365           I 15 I 6
s Hoolock_leuconedys.ctg274                                    435387 19 +    630532 A-GTCAG---C---T-CCC-AG---CC-----C---T-CA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45544 20 +     55795 C-ATCAG---C---TACCC-AT---CC-----C---T-TC
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83605 19 +    135385 A-A-CAG---T---GACTT-CA---TC-----T---T-TC
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7521395 18 -   7955117 ---TCAG---C---TCCCC-AG---CC-----A---T-TC
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   23021 19 +     31101 A-GTCAG---C---T-CTC-TG---CC-----C---C-TC
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8277313 20 -   9596543 A-ATAAG---C---TACCC-AA---TT-----C---T-TC
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    16891 20 -     42476 A-ATAAG---C---TACCC-AC---TC-----C---T-TC
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15524576 19 -  30322482 A-GTCAG---C---T-CTC-TG---TC-----C---C-TC
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        8251 19 +     64341 A-GGCAG---C---T-CCC-AG---CC-----C---T-CC
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                            591 19 -     35062 A-GGCAG---C---T-CCC-AG---CC-----C---T-CC
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        8279 19 +     35603 A-GGCAG---C---T-CCC-AG---CC-----C---T-CC
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    29693 19 +     38576 A-GGCAG---C---T-CTC-AG---CC-----C---T-CC
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         26393 19 +     66356 A-GGCAG---C---T-CTC-AG---CC-----C---T-CC
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         11468 19 -     23766 A-GTCAG---C---T-CTC-TG---CC-----C---C-TC
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29529 19 +     45836 A-GTCAG---C---T-CTC-TG---CC-----C---C-TC
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          2067 19 +     25010 A-GTCAG---C---T-CTC-TG---CC-----C---C-GC
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27465 19 +     54090 A-GTCAG---C---T-CTC-TG---CC-----C---C-TC
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3043565 20 +   3914936 A-ATCAG---G---TACCC-AA---CC-----C---T-CC
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     6993 20 -     14121 A-ATCAG---C---TACAC-TA---AC-----C---C-TC
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437738 19 +   1826925 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            6369 19 +     11245 A-GTCAG---C---A-CTC-TG---CC-----C---C-TC
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1005190 19 +   6120653 A-GTCAG---C---A-CTC-TG---CC-----C---C-TC
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4217838 12 -  43346337 A-ATCAG---C---TACCC---------------------
i Loxodonta_africana.GL010049.1                          C 0 I 8
s Lycaon_pictus.CM007581.1                                17955843 20 -  59628241 A-ATCAG---C---TACTC-AA---CC-----C---T-TC
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               7553 19 +     40492 A-GTCAG---C---T-CCC-AG---CC-----C---T-CC
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59676812 19 +  60120075 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13328 19 -     26193 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            81112 19 -    114318 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  6799 19 -     23192 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16272 19 -     29190 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  24837 19 +     37952 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186839926 19 + 187317192 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458489 19 -  25927173 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  80685 19 +     89720 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 7686 19 +     20474 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   7486 19 -     14993 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  330352 19 -    668171 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 5799 19 -     24072 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26424 19 -     45290 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91140 20 +     94391 A-ATCAG---C---TACCC-AA---AC-----C---T-TT
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23938015 19 -  24302211 A-GTCAG---C---T-CCC-AG---CC-----C---T-CC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352139 19 +    752769 A-GTCAG---C---T-CCC-AG---CC-----C---T-CC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33103592 18 -  40650429 ---TCAG---C---TACCC-AG---CC-----A---T-TC
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        10959 20 -    207569 A-CTGAG---C---TCGCC-AA---AC-----C---T-CC
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10556 20 +     13704 A-ATCAG---C---TACCC-AA---CC-----C---T-GC
i Mellivora_capensis.MelCap_flattened_line_69365         I 39 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 33253 17 +    140813 A-ATCAT---T---CACTA-GA---CC-----C-------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12182715 16 -  29670104 A-ATTAT---T---CACTA-GA---CC-------------
i Mesocricetus_auratus.KB708134.1                        I 19 I 1
s Mico_argentatus.k141_1239457                                6486 19 -      7380 A-GGCAG---C---T-CCC-AG---CC-----C---T-CC
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_humeralifer.k141_2457295                                715 19 +      1079 A-GGCAG---C---T-CCC-AG---CC-----C---T-CC
i Mico_humeralifer.k141_2457295                          C 0 C 0
s Mico_schneideri.k141_1950671                                      6498 19 -      7356 A-GGCAG---C---T-CCC-AG---CC-----C---T-CC
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18292002 19 -  93316391 A-GTCAG---C---T-CTC-TG---CC-----C---C-TC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    22814 12 -    145209 A-ATCAG---C---TGCCC---------------------
i Microgale_talazaci.MicTal_scaffold_6613                I 39 I 8
s Micronycteris_hirsuta.MicHir_scaffold_52381                16162 17 -     19307 G-ATCAG---C---TACTC-AA---AC-----C-------
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11260963 16 -  27267610 A-ATCAT---T---CACTA-GA---CC-------------
i Microtus_ochrogaster.CM001695.1                        C 0 I 1
s Miniopterus_natalensis.LDJU01000034.1                    1851122 20 +   8254450 A-ATCAG---C---AACCT-AA---CC-----C---T-TC
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34804 20 +     64694 A-ATCAG---C---GACCT-AA---TC-----C---T-TC
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9721 19 -     28506 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6433 20 -      8324 A-ATCAG---G---TACCC-AA---CC-----C---T-CC
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 40 C 0
s Mirza_zaza.k141_952172                                      9546 19 -     37649 A-GTCAG---C---T-CTC-TG---CT-----C---C-TC
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142147 17 -    366855 G-GTCAG---C---TGCCC-GA---GG-----C-------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 3
s Mungos_mungo.MunMun_flattened_line_23663                   35943 20 +     37127 C-ACCAG---C---TACCT-GA---CC-----C---T-TC
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           7344 21 +     14753 AAATCAG---C---TACCC-AA---TC-----C---T-TC
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84361858 23 - 120012414 A-CTCAT---T---CACTA-GA---CC-----CCAGA-CC
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87650854 22 - 129401213 A-CTCAT---T---CACTA-GA---CC-----CCATA-C-
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31355510 23 -  89631738 A-CTCAT---T---CACTA-GA---CC-----CCATA-CC
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90752916 23 - 130317789 A-CTCAT---T---CACTA-GA---CC-----ACATA-CC
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              5450 20 +     14296 A-GTCAG---C---TACCC-AA---CC-----G---T-TC
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               301970 20 -  14710649 A-ATCCG---C---TACCC-AA---CC-----C---T-GC
i Mustela_putorius.JH418006.1                            I 39 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71754 13 -     80779 --------------TGTCT-GA---TC-----T---T-TC
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 7 C 0
s Myotis_brandtii.KE162005.1                                280988 20 -  10118263 A-ATCAG---C---TACCC-AA---TC-----C---T-TC
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1588244 20 -   6019432 A-ATCAG---C---TACCC-AA---TC-----C---T-TC
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3904342 20 -   4330536 A-ATCAG---C---TACCC-AA---TC-----C---T-TC
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                         491 20 +      1835 A-ATCAG---C---TACCC-AA---TC-----C---T-TC
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189775 24 +    196477 A-GTCAG---C---TACCCAGCCAACC-----C---T-TC
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2034574 18 -   3037898 A-ATCAG---C---TT--C-AG---AC-----C---T-TC
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               15723 19 +     21681 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308019 20 +  31847680 A-ATCAG---G---TACCC-AA---CC-----C---T-CC
i Neomonachus_schauinslandi.NINY01007730.1               I 40 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    758406 17 +    783361 G-GTCGG---C---TACCC-AT---AA-----C-------
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149907 20 -   9404916 A-ATCAG---C---TACAC-AA---CC-----C---T-TC
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102586734 19 - 196305487 A-GTCAG---C---A-CTC-TG---CC-----C---C-TG
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              658 19 +      2075 A-GTCAG---C---A-CTC-TG---CC-----C---C-TG
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105762089 19 + 199412804 A-GTCAG---C---A-TTC-TG---GC-----C---C-TG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Octodon_degus.JH651603.1                                  747364 13 +  11899542 --------------Tacct-ga---tc-----t---t-tt
i Octodon_degus.JH651603.1                               I 7 I 121
s Ochotona_princeps.JH802162.1                             1364377  5 +   3988456 A-ACCA----------------------------------
i Ochotona_princeps.JH802162.1                           C 0 I 4
s Odobenus_rosmarus.KB229312.1                              507161 20 -   2017862 A-GTCAG---G---TACCC-AA---CC-----C---T-CC
i Odobenus_rosmarus.KB229312.1                           I 40 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   25632 16 +     28053 A-ATCAT---T---CACTA-GA---CC-------------
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 1
s Onychomys_torridus.OnyTor_scaffold_2986                    80642 16 +    102263 A-ATCAT---T---CGCTA-GA---CT-------------
i Onychomys_torridus.OnyTor_scaffold_2986                I 1 I 1
s Orycteropus_afer.OryAfe_flattened_line_144387              10617 12 -     18566 A-ATCAG---C---TACCC---------------------
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 I 8
s Oryctolagus_cuniculus.CM000791.1                        67147853 20 + 174332312 A-ATCAG---C---TACAC-TA---AC-----C---C-TC
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462855 20 -    559221 A-ATCAG---C---TACTC-AA---CC-----C---T-TC
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4641 19 +      8798 A-GTCAG---C---A-CTC-TG---CC-----C---C-TC
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696804 19 -   1103335 A-GTCAG---C---A-CTC-TG---CC-----C---C-TC
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    44679 19 +     80009 A-GTCAG---C---T-CCC-AG---CC-----C---T-CC
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189143580 19 + 189151597 A-GTCAG---C---T-CCC-AG---CC-----C---T-CC
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  151670 20 +    230217 C-ATCAG---C---TCCCC-AG---CC-----C---T-TC
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                264879 20 +  18783137 C-ATCAG---C---TCCCC-AG---CC-----C---T-TC
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4721758 20 -   8748460 C-ATCAG---C---TCCCC-AG---CC-----C---T-TC
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183443815 19 + 183742232 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7461 19 +     20448 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20564273 19 +  20919399 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6205 19 +     41871 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     9498 19 +     27711 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                   495 19 -     11374 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13172 20 -     78924 A-CTCAG---C---TACCC-AG---CC-----C---T-TT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10629 19 +     13100 A-GTCAG---C---A-CTC-TG---CC-----C---C-TC
i Perodicticus_ibeanus.k141_855320                       C 0 I 1
s Perodicticus_potto.k141_1092580                             9023 19 +     25941 A-GTCAG---C---G-CTC-TG---CC-----C---C-TC
i Perodicticus_potto.k141_1092580                        C 0 I 1
s Peromyscus_maniculatus.KI615324.1                       18195267 16 -  18517816 A-ATCAT---T---CACTA-GA---CC-------------
i Peromyscus_maniculatus.KI615324.1                      I 1 I 1
s Petromus_typicus.PetTyp_scaffold_42190                     28641  4 -     29689 --------------TGCC----------------------
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 I 5
s Piliocolobus_badius.k141_1234363                           44214 19 +     62158 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        38961 19 +     89929 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40377 19 +     51399 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296615 19 -  14605196 A-GTCAG---C---T-CCC-AG---CC-----C---T-CC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2281 20 +     22620 A-ATCGG---C---TACCC-AA---TC-----C---T-TC
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189131718 19 + 189387572 A-GTCAG---C---T-CCC-AG---CC-----C---T-CC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9571325 19 +   9816681 A-GTCAG---C---T-CCC-AG---CC-----C---T-CC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               73899 19 -     81375 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              5719 19 +     19060 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 13859 12 -     22811 A-ACCAG---C---TACCC---------------------
i Procavia_capensis.ProCapCap_scaffold_85530             I 15 I 6
s Prolemur_simus.MPIZ01000396.1                            2597256 19 -   4620579 A-GTcag---c---t-ctc-tg---tc-----c---c-tc
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     991242 19 +   2598838 A-GTcag---c---t-ctc-tg---cc-----c---c-tc
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29554 19 +     38485 A-GTCAG---C---T-CTC-TG---CC-----C---C-TC
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1596 19 -     13098 A-GTCAG---C---T-CTC-TG---CC-----C---C-TC
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          27075 19 +     35766 A-GTCAG---C---T-CTC-TG---CC-----C---C-TC
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           5262 19 -     24134 A-GTCAG---C---T-CTC-TG---CC-----C---C-TC
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        29087 19 -     67325 A-GTCAG---C---T-CTC-TG---CC-----C---C-TC
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           5310 19 -      6182 A-GTCAG---C---T-CTC-TG---CC-----C---C-TC
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            10898 17 -     21651 A-ATCAT---T---CACTG-GA---CC-----C-------
i Psammomys_obesus.NESX01036370.1                        C 0 I 1
s Pteronotus_parnellii.KE909381.1                            15598 17 -     21811 C-ATCAG---C---TGCCC-AA---AC-----C-------
i Pteronotus_parnellii.KE909381.1                        C 0 I 3
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40750 20 +     42204 A-ATCAG---C---TACCC-AA---CC-----C---T-GC
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 39 C 0
s Pteropus_alecto.KB030862.1                              22977289 20 +  28871421 A-ATCAG---C---TACCC-AA---AC-----C---T-TT
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                7342 20 -      8028 A-ATCAG---C---TACCC-AA---AC-----C---T-TT
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20274829 20 -  38429054 C-ATCAG---C---TCCCC-AA---CC-----C---T-TC
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15705 19 -     91421 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7609825 19 +   7812017 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             15704 19 -     72585 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53571114 14 +  90668790 A-TTCAT---T---CACTT-AT------------------
i Rattus_norvegicus.chr16                                C 0 I 3
s Rhinopithecus_bieti.k119_217274                             7415 19 -     11128 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236764 19 - 195417433 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672420 19 +   7961872 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88330 20 -     96226 A-ATCAG---C---TACCC-AA---AC-----C---T-TT
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_8081                                   867 19 +     42994 A-GGCAG---C---T-CCC-AG---CC-----C---T-CC
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_57697                                652 19 +      1030 A-GGCAG---C---T-CCC-AG---CC-----C---T-CC
i Saguinus_imperator.k141_57697                          C 0 C 0
s Saguinus_inustus.k141_3945547                                731 19 -      8737 A-GGCAG---C---T-CCC-AG---CC-----C---T-CC
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_midas.LG03                                    209470218 19 + 209938924 A-GGCAG---C---T-CCC-AG---CC-----C---T-CC
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 8853 19 -      9399 A-GGCAG---C---T-CCC-AG---CC-----C---T-CC
i Saguinus_mystax.k141_374627                            C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153696 25 -    313613 A-GTCAG---C---TACCC-AA---TTCAGTTC---T-TC
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 39 C 0
s Semnopithecus_entellus.k141_1672505                          596 19 -     12572 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27446 19 +     39453 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            7964 19 +     27826 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             7486 19 -     19483 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                       787 19 -     12762 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                            648 19 +     13763 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                      795 16 -     30804 A-ATCAT---T---AACTA-GA---TC-------------
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 I 1
s Solenodon_paradoxus.SolPar_flattened_line_126               4281 22 +   1910179 C-ATCGT---C---TAT----A---TGCAGCCC---T-TC
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13651533  4 -  18376816 --------------------------------C---T-CC
i Sorex_araneus.JH798187.1                               I 45 C 0
s Spermophilus_dauricus.KZ294078.1                         1954448 18 -   3870691 ---TCAG---C---TCCCC-AG---CC-----A---T-TC
i Spermophilus_dauricus.KZ294078.1                       I 34 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             31241 20 +     97271 A-ATCAG---C---TACCC-AA---CC-----T---G-CC
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 39 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              18847 20 -    196729 C-ACCAG---C---TACCC-GA---CC-----C---T-TC
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6811330 16 +  69701581 A-GTCAG---C---TACCC-AG---CC-------------
i Sus_scrofa.CM000828.4                                  C 0 I 1
s Tadarida_brasiliensis.TadBra_scaffold_25820                11336 19 +     41958 --ATCAG---C---TACCC-AA---CC-----C---T-TC
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 6
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73134 24 +    116680 A-ATCAG---C---TACCCAGCCAACC-----C---T-TC
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      119309 13 -    156842 C-GTCAG---C---TGCGC-A-------------------
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387754 20 +    539355 C-GTCAG---C---TGCCC-AG---C------C---TGTC
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               26997 10 +     70052 ----------------CCC-AG----C-----C---T-CT
i Tarsius_lariang.k141_2201908                           I 7 C 0
s Tarsius_wallacei.k141_254427                                1794 10 -     16117 ----------------CCC-AG----C-----C---T-CT
i Tarsius_wallacei.k141_254427                           I 7 C 0
s Theropithecus_gelada.CM009954.1                        186429133 19 + 186847797 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105950 13 +    114563 --------------TACCT-TA---TC-----T---T-TC
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 23 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   6907 23 +      8208 A-ATCAG---C---TCCTC-ACCAGTC-----C---T-TC
i Tolypeutes_matacus.TolMat_scaffold_228639              I 23 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81713 17 +    610378 G-ATCAG---C---TACCC-AA---AC-----C-------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         11537 19 -     20410 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                       651 19 -     12674 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       11638 19 +     19930 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       8049 19 -     19997 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48188 19 -     60166 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        15660 19 -     27529 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     15604 19 -     18194 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9316 19 -     21137 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    8019 19 -     10723 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7191 19 +      9834 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        25504 19 +     32220 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5939606 19 +   6242583 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        8857 19 +     20839 A-GTCGG---C---T-CCC-AG---CC-----C---T-CC
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4293760 12 +  10818551 A-ATTAG---C---TACCC---------------------
i Trichechus_manatus.JH594705.1                          C 0 I 8
s Tupaia_chinensis.KB320699.1                              2156326 20 +   4065304 A-GTCAG---C---TACCC-AA---CC-----C---T-TC
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9769 20 -     10553 A-ATTAG---T---TACCC-AA---CC-----C---T-TC
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   53807 25 -     77625 A-ATCAG---T---TACCT-AA---CTCAATTC---T-TC
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4850955 20 -   5085361 A-ATCAG---C---TACCC-AA---CC-----C---T-CC
i Ursus_maritimus.KK499267.1                             I 40 C 0
s Varecia_rubra.k141_590885                                  11921 19 +     50397 A-GTCAG---C---T-CTC-TG---TC-----C---C-TC
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11980 19 +     24756 A-GTCAG---C---T-CTC-TG---TC-----C---C-TC
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5372408  3 -   5488506 A-AT------------------------------------
i Vicugna_pacos.KN270157.1                               C 0 I 6
s Vulpes_lagopus.VulLag_flattened_line_30954                 11307 20 -     43706 A-ATCAG---C---TGCAC-AA---CC-----C---T-TC
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          1569 18 +    224448 ---TCAG---C---TACCC-AG---CC-----C---T-TT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      15405 20 +     63895 A-ATACG---C---TCCCC-AG---TG-----C---T-TC
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Sapajus_macrocephalus.k141_351809                          56529  0 -     80660 C
e Sapajus_apella.ctg103                                    5421288  0 -   5703754 C
e Saimiri_ustus.k141_1484609                                 23915  0 -     61129 C
e Saimiri_sciureus.k141_2278166                               3771  0 -     23631 C
e Saimiri_oerstedii.k141_1487881                             40698  0 -     64574 C
e Saimiri_macrodon.k141_716185                               24019  0 +     45824 C
e Saimiri_cassiquiarensis.k141_2188234                       23924  0 +     46362 C
e Saimiri_boliviensis.NW_024100920.1                     119951582  0 - 121099817 C
e Saguinus_labiatus.k141_285685                               8505  5 +      8564 I
e Cebus_unicolor.k141_1837183                                  997  0 +     14051 C
e Cebus_olivaceus.k141_1764483                                1272  0 +     28840 C
e Cebus_albifrons.Contig27                                25653334  0 +  26074798 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50964  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18978  0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  36433  7 +     51376 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       7355 21 +     62944 T--C---TAGGG-A-TG----CCT--CA-----C--A----CA-G-C
s Acinonyx_jubatus.LLWD01001279.1                           827842 20 -   1699592 T--C---TAGG-AA-TG----TCT--C------C--A----CA-C-C
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     71323 19 +     87051 CCCA---TAACA-G-CG----CCT--CA-----C--C----------
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511114 20 -  29979442 C--C---TAGG-AA-TG----TTT--C------C--T----CA-C-C
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             79884 20 -    347723 C--T---TAGG-AA-TC----TTT--C------C--A----CA-C-C
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     75025 21 -     89534 T--C---TCTGA-G-GA----CTT--CA-----C--C----CA-G-C
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   15283 21 -     52922 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15199 21 -     28001 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          5697 21 -     18505 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           6549 21 -     12518 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              8144 19 +     51355 T--C---TGGGG-G-TG----CCT--CA-----C--A----GG----
i Alouatta_belzebul.k141_3560514                         C 0 I 1
s Alouatta_caraya.k141_1701091                                1253 19 -     36483 T--C---TGGGG-G-TG----CCT--CA-----C--A----GG----
i Alouatta_caraya.k141_1701091                           C 0 I 1
s Alouatta_discolor.k141_566626                              11702 19 +     28687 T--C---TGGGG-G-TG----CCT--CA-----C--A----GG----
i Alouatta_discolor.k141_566626                          C 0 I 1
s Alouatta_juara.k141_1302312                                  218 19 +     27940 T--C---TGGGG-G-TG----CCT--CA-----C--A----GG----
i Alouatta_juara.k141_1302312                            C 0 I 1
s Alouatta_macconnelli.k141_918386                            1262 19 -      9457 T--C---TGGGG-G-TG----CCT--CA-----C--A----GG----
i Alouatta_macconnelli.k141_918386                       C 0 I 1
s Alouatta_nigerrima.k141_1929159                              218 19 +     30492 T--C---TGGGG-G-TG----CCT--CA-----C--A----GG----
i Alouatta_nigerrima.k141_1929159                        C 0 I 1
s Alouatta_palliata.k141_2135620                              4213 19 +     47717 T--C---TGGGG-G-TG----CCT--CA-----C--A----GG----
i Alouatta_palliata.k141_2135620                         C 0 I 1
s Alouatta_puruensis.k141_362188                               945 19 +      5663 T--C---TGGGG-G-TG----CCT--CA-----C--A----GG----
i Alouatta_puruensis.k141_362188                         C 0 I 1
s Alouatta_seniculus.k141_117119                             15397 19 +     50774 T--C---TGGGG-G-TG----CCT--CA-----C--A----GG----
i Alouatta_seniculus.k141_117119                         C 0 I 1
s Anoura_caudifer.AnoCau_scaffold_1412                      185884 20 +    412891 T--G---CTGG--A-TG----CTC--CA-----C--A----TT-A-C
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 3
s Aotus_azarae.k141_3104676                                  16144 19 -     33861 T--C---TGGAG-G-CG----CCT--CA-----C--A----CG----
i Aotus_azarae.k141_3104676                              C 0 I 1
s Aotus_griseimembra.k141_2240599                            16190 19 -     34016 T--C---TGGAG-G-CG----TGT--CA-----C--A----TG----
i Aotus_griseimembra.k141_2240599                        C 0 I 1
s Aotus_nancymaae.KZ198451.1                               4298568 19 -   5030052 T--C---TGGAG-G-CG----CCT--CA-----C--A----CG----
i Aotus_nancymaae.KZ198451.1                             C 0 I 1
s Aotus_trivirgatus.k141_2152450                             16177 19 -     34685 T--C---TGGAG-G-TG----CCT--CA-----C--A----CG----
i Aotus_trivirgatus.k141_2152450                         C 0 I 1
s Aotus_vociferans.k141_344750                               29302 19 -     47192 T--C---TGGAG-G-TG----CCT--CA-----C--A----CG----
i Aotus_vociferans.k141_344750                           C 0 I 1
s Aplodontia_rufa.AprRuf_scaffold_68852                      13130 21 +     20879 T--C---TAGCA-A-TG----TCT--CA-----C--C----CA-A-G
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       11993  4 +     14667 -------CAGG------------------------------------
i Arctocebus_calabarensis.k141_2318572                   I 1 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5274 20 +     43469 T--G---CAGA--A-TG----CTT--CA-----C--A----TT-A-C
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 3
s Avahi_laniger.k141_765380                                  54217 20 -     92717 T--C---C-AGG-A-CA----CCT--CG-----C--A----CA-G-C
i Avahi_laniger.k141_765380                              I 3 C 0
s Avahi_peyrierasi.k141_1424874                              54848 20 +     85213 T--C---C-AGG-A-CA----CCT--CG-----C--A----CA-A-C
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             5991 19 -     10423 T--C---TGGGG-G-TG----CCT--CA-----C--A----CG----
i Callibella_humilis.k141_1278103                        C 0 I 1
s Callimico_goeldii.k141_1091182                             25460 19 +     31915 T--C---TCGGG-G-TG----CCT--CA-----C--A----TG----
i Callimico_goeldii.k141_1091182                         C 0 I 1
s Callithrix_jacchus.pat_scaffold_3                       23591145 19 - 189096842 T--C---TGGGG-G-TG----CCT--CA-----C--A----CG----
i Callithrix_jacchus.pat_scaffold_3                      C 0 I 1
s Callithrix_kuhlii.k119_1168854                               544 19 -     12329 T--C---TGGGG-G-TG----CCT--CA-----C--A----CG----
i Callithrix_kuhlii.k119_1168854                         C 0 I 1
s CanFam4.chr16                                           17799704 20 -  60362399 C--C---TAGG-AA-TG----TTT--C------T--A----TA-T-C
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                      452 20 -     43241 C--C---TAGG-AA-TG----TTT--C------T--A----TA-T-C
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9035147 20 -   9314153 C--C---TAGG-AA-TG----TTT--C------T--A----TA-T-C
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17959623 20 -  59632846 C--C---TAGG-AA-TG----TTT--C------T--A----TA-T-C
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18500920 20 +  63665305 C--C---TAGG-AA-TG----TTT--C------T--A----TA-T-C
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1569 17 -     12242 T--C---TAGAA-G-AC----CTCA--G-----C--G----------
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           156514 21 -    496798 T--C---TGGGG-G-TG----CCT--CC-----C--A----CA-G-C
i Carlito_syrichta.NW_007259797.1                        I 4 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5639 20 -     11696 T--G---CAGA--A-CG----CTT--CC-----C--A----TT-A-T
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 3
s Castor_canadensis.CasCan_scaffold_2074                    137619 21 +    179628 T--C---TAGCA-A-TT----CCT--TA-----C--C----CA-G-T
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     93600 24 +    217609 T--CTCTGAGA--A-TG----ctt--ca-----c--a--c-ga-c-c
i Catagonus_wagneri.CatWag_scaffold_2839                 I 1 C 0
s Cebuella_niveiventris.k141_1251222                         10626 19 -     11392 T--C---TGGGG-G-TG----CCT--CA-----C--A----CG----
i Cebuella_niveiventris.k141_1251222                     C 0 I 1
s Cebuella_pygmaea.k141_1309012                               6693 19 -      7577 T--C---TGGGG-G-TG----CCT--CA-----C--A----CA----
i Cebuella_pygmaea.k141_1309012                          C 0 I 1
s Cebus_albifrons.Contig27                                25653334 19 +  26074798 T--C---TGGGG-G-TG----CCT--CG-----C--A----CG----
i Cebus_albifrons.Contig27                               C 0 I 1
s Cebus_olivaceus.k141_1764483                                1272 19 +     28840 T--C---TGGGG-G-TG----CCT--CG-----C--A----CG----
i Cebus_olivaceus.k141_1764483                           C 0 I 1
s Cebus_unicolor.k141_1837183                                  997 19 +     14051 T--C---TGGGG-G-TG----CCT--CG-----C--A----CG----
i Cebus_unicolor.k141_1837183                            C 0 I 1
s Cephalopachus_bancanus.k141_1423433                         6012 21 +     31688 T--C---TGGGG-G-TG----CCT--CC-----C--A----CA-G-C
i Cephalopachus_bancanus.k141_1423433                    I 4 C 0
s Ceratotherium_simum.JH767749.1                          12231990 19 +  27778364 T--C---TAGG--A-AT----GCT--T------T--G----CA-c-a
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3017 19 -     25243 T--C---TAGG--A-AT----GCT--T------T--G----CA-c-a
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4476214 21 +   4669795 T--C---TAGGG-A-CG----CCT--CA-----C--A----CG-G-C
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                         716 21 +     17872 T--C---TAGGG-A-CG----CCT--CA-----C--A----CG-G-C
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           1373 21 -     14043 T--C---TAGGG-A-CG----CCT--CA-----C--A----CG-G-C
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9406 21 +     27781 T--C---TAGGG-A-CG----CCT--CA-----C--A----CG-G-C
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         9574 21 -     20310 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          12554 21 +     29689 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7304 21 -     20078 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-T-C
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          15222 21 -     27936 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            4092 21 -     17152 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38817633 21 +  39242232 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223322 21 -  21565898 T--C---TAGGG-A-TG----CCT--CA-----C--A----CA-G-C
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40441 21 -     53127 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                         692 21 +     13442 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15241 21 -     27947 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         15217 21 +     17596 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          1264 21 +     14005 T--G---TAGGG-A-CG----CCT--CA-----C--A----CA-T-C
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1038 15 -      8501 T--C---TAGGA-A-CG----CCT--CC-------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             21597 20 -     52598 T--C---C-AGG-A-CA----CCT--GG-----C--A----CA-G-C
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16962 20 +     57038 T--C---C-AGG-A-CA----CCT--GG-----C--A----CA-G-C
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1253443 18 +   2543920 T--C---TAGGA-G-GT----CTT-CCA-----G--G----------
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2206961                            892 19 -     15524 T--C---TGGGG-G-TG----CCT--CA-----C--A----CA----
i Chiropotes_albinasus.k141_2206961                      C 0 I 1
s Chlorocebus_aethiops.ctg25                              18429201 21 -  18827391 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15638 21 -     50209 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422638 21 + 135778131 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 18846 22 +     19366 T--C---TGGGA-A-TG----CTT--CA-----C--A----CA-CCA
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            173923 22 +    839153 T--C---TGGGA-A-TG----CTT--CA-----C--A----CA-CCA
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1911151 21 +   2368649 T--C---TCGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949403 21 + 200372422 T--C---TCGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37685 21 +     84244 T--C---TCGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17548610 20 -  53390261 T--C---TAAG--A-TG----CTT--CA-----C--A----CAAG--
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14942 23 -     20389 A--T---TATC-AA-TG----CTT--TG-----CCAA----CA-A-C
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               3520  2 -     19598 --------------------------------------------G-T
i Crocidura_indochinensis.CroInd_scaffold_37019          I 18 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 50557 19 +     63868 CCAG---GAACT-G-TG----ACT--CA-----C--C----------
i Cricetomys_gambianus.CriGam_scaffold_18520             I 1 C 0
s Cricetulus_griseus.LT883664.1                           11668076 19 + 224834208 CCAA---TAACA-G-TA----CCT--CA-----C--T----------
i Cricetulus_griseus.LT883664.1                          I 1 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29030 19 -     87169 T--C---TGGG-AA-TG-----CT--C------C--A----CA-C-C
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837608 21 +   1526836 G--C---TAAGA-T-TT----TCT--CA-----C--A----CC-A-C
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  36440 17 +     51376 T--C---TAGGA-A-AC----CTCA--G-----G--G----------
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 7 C 0
s Dasypus_novemcinctus.JH564415.1                            64061 15 +   2246927 C--C---TGGGA-A-TG----CCT--CA-------------------
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537819  7 -  12879189 t--c---cgggg-----------------------------------
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630655 20 +  20541912 T--G---CAGG--A-CG----CTT--CT-----C--A----TT-A-C
i Desmodus_rotundus.KZ672289.1                           C 0 I 3
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673839 19 +   1390856 T--T---TAGG--A-AT----GCA--T------T--G----CA-c-a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6590 19 +    198055 T--C---TAGG--A-AT----GCT--T------T--G----CA-c-a
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36932 17 +     67921 C--C---TGGGA-G-GC----CTC-TCA-----G-------------
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Echinops_telfairi.JH980293.1                            48781128 27 + 111700974 G--C---TCAGA-A-TACATCCCC---C-----C--CTCC-AT-T-A
i Echinops_telfairi.JH980293.1                           I 8 C 0
s Eidolon_helvum.KE759718.1                                  11069 21 +     11740 T--C---TAGG-AA-TA----CTT--CA-----C--A----CA-A-C
i Eidolon_helvum.KE759718.1                              C 0 I 3
s Elephantulus_edwardii.JH947257.1                         1098305 13 +  10337057 T--C---TACTC-A-CT----CTA-----------------------
i Elephantulus_edwardii.JH947257.1                       I 8 C 0
s Ellobius_lutescens.LOEQ01008920.1                          21027 19 -    110024 CCAA---TAACA-G-TG----CCT--CA-----T--C----------
i Ellobius_lutescens.LOEQ01008920.1                      I 1 C 0
s Ellobius_talpinus.LOJH01081419.1                             931 19 +      8657 CCAA---TAACA-G-TG----CCT--CA-----C--C----------
i Ellobius_talpinus.LOJH01081419.1                       I 1 C 0
s Enhydra_lutris.KZ291758.1                               16329841 20 -  41312741 C--T---CAGG-AA-TC----TTT--C------C--A----CA-C-C
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2146267 21 -  14770903 T--G---CAGG--AATG----CTT--CT-----c--a----ca-a-c
i Eptesicus_fuscus.JH977646.1                            C 0 I 3
s Equus_asinus.JREZ01000139.1                              1284098 19 +   4378816 t--c---tagg--a-ac----act--t------c--g----ca-c-a
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18531918 19 -  39960074 t--c---tagg--a-ac----act--t------c--g----ca-c-a
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               33947 19 +    498745 t--c---tagg--a-ac----act--t------c--g----ca-c-a
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3328780 21 -   7059049 T--C---TAAC-AA-TG----TTT--GG-----C--A----CA-G-C
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21205806 21 -  21539334 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_576796                              40642 20 -     44621 T--C---C-AGG-A-CA----CCT--CG-----C--A----CA-G-C
i Eulemur_albifrons.k141_576796                          C 0 C 0
s Eulemur_collaris.k141_377015                                7023 20 -     16928 T--C---C-AGG-A-CA----CCT--CG-----C--A----CA-G-C
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              16055 20 -     25546 T--C---C-AGG-A-CA----CCT--CG-----C--A----CA-G-C
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            13251 20 +     26330 T--C---C-AGG-A-CA----CCT--CG-----C--A----CA-G-C
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14486 20 +     23973 T--C---C-AGG-A-CA----CCT--CG-----C--A----CA-G-C
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                13248 20 +     75513 T--C---C-AGG-A-ca----cct--cg-----c--a----ca-g-c
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 11178 20 +     97555 T--C---C-AGG-A-ca----cct--cg-----c--a----ca-g-c
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              669 20 +     13026 T--C---C-AGG-A-CA----CCC--CG-----C--A----CA-G-C
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4722 20 -     17153 T--C---C-AGG-A-CA----CCT--CG-----C--A----CA-G-C
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              14295 20 +    111500 T--C---C-AAG-A-ca----cct--cg-----c--a----ca-g-c
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237484 20 + 206538554 T--C---TAGG-AA-TG----TCT--C------C--A----CA-C-C
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20196327 20 + 205367284 T--C---TAGG-AA-TG----TCT--C------C--A----CA-C-C
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 10080 20 -     36744 T--C---TAGG-AA-TG----TCT--C------C--A----CA-C-C
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             850968 19 +   3816255 t--c---tAGGA-C-GC----CTCAGCT-----G--G----------
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg2040                                     427140  6 -    453645 T--C---CAGG------------------------------------
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4830  6 +     11339 T--C---CAGG------------------------------------
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            2128  6 +     41679 T--C---CAGG------------------------------------
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1732 21 -      9135 T--C---CAGGA-A-CG----CCC--CA-----C--G----CG-A-C
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            31899 21 +     49224 T--C---TAAGA-A-TG----CTT--CA-----C--C----TG-A-C
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              16610 21 -     32273 T--C---TAGGG-A-TG----CCT--CA-----C--A----CA-G-C
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186338746 21 + 186649187 T--C---TAGGG-A-TG----CCT--CA-----C--A----CA-G-C
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33144 21 +     78134 T--C---TAAGA-A-TG----CTG--TG-----C--C----CG-A-C
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           7350 20 -     19426 T--C---C-AGG-A-CA----CCT--CG-----C--A----CA-G-C
i Hapalemur_alaotrensis.k141_170648                      I 7 C 0
s Hapalemur_gilberti.k141_488810                             12503 20 -     15286 T--C---C-AGG-A-CA----CCT--CG-----C--A----CA-G-C
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             14142 20 +     18253 T--C---C-AGG-A-CA----CCT--CG-----C--A----CA-G-C
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         14243 20 -     41752 T--C---C-AGG-A-CA----CCT--CG-----C--A----CA-G-C
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         14080 20 -     16460 T--C---C-AGG-A-CA----CCT--CG-----C--A----CA-G-C
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242864 20 +    327341 T--C---TAGG-AA-TG----TCT--C------C--A----CA-C-C
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20662725 19 +  22651954 t--c---tAGGA-C-AC----CTCACCT-----G--G----------
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1422 23 +      7595 T--C---TAGCA-A-TA----CTT---C-----C--C-CAAGT-C-A
i Heterohyrax_brucei.HetBruBak_scaffold_122365           I 6 C 0
s Hoolock_leuconedys.ctg274                                    435406 21 +    630532 T--C---TAGGG-A-TG----CCT--CA-----C--A----CA-G-C
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45564 20 +     55795 T--C---TAGG-AA-TG----TCA--C------A--T----CA-C-C
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83624 19 +    135385 T--C---TAGGA-C-AC----CTCACCT-----G--G----------
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7521413 21 -   7955117 T--C---CAGGA-A-TG----TCT--CC-----C--C----CA-A-C
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   23040 20 +     31101 T--C---C-AGG-A-CA----CCT--CA-----C--A----CA-G-C
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8277333 21 -   9596543 T--C---TCTGA-G-TA----CTT--CA-----C--C----CA-G-C
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    16911 21 -     42476 T--G---CAGG--AGCG----CTT--CA-----C--A----CA-A-C
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 3
s Lemur_catta.scaffold_24                                 15524595 20 -  30322482 T--C---C-AGG-A-ca----cct--cg-----c--a----ca-g-c
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        8270 19 +     64341 T--C---TGGGG-G-TG----CCT--CA-----C--A----CG----
i Leontocebus_fuscicollis.k141_1820339                   C 0 I 1
s Leontocebus_illigeri.k141_1304848                            610 19 -     35062 T--C---TGGGG-G-TG----CCT--CA-----C--A----CG----
i Leontocebus_illigeri.k141_1304848                      C 0 I 1
s Leontocebus_nigricollis.k141_4610752                        8298 19 +     35603 T--C---TGGGG-G-TG----CCT--CA-----C--A----CG----
i Leontocebus_nigricollis.k141_4610752                   C 0 I 1
s Leontopithecus_chrysomelas.k141_1519602                    29712 19 +     38576 T--C---TGGGG-G-TG----CCT--CA-----C--A----CA----
i Leontopithecus_chrysomelas.k141_1519602                C 0 I 1
s Leontopithecus_rosalia.k141_464620                         26412 19 +     66356 T--C---TGGGG-G-TG----CCT--CA-----C--A----CA----
i Leontopithecus_rosalia.k141_464620                     C 0 I 1
s Lepilemur_ankaranensis.k141_596936                         11487 19 -     23766 T--C---C-AGG-A-C-----CCT--CG-----C--A----CA-G-C
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29548 19 +     45836 T--C---C-AGG-A-C-----CCT--CG-----C--A----CA-G-C
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          2086 19 +     25010 T--C---C-AGG-A-C-----CCT--CA-----C--A----CA-G-C
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27484 19 +     54090 C--C---C-AGG-A-C-----CCT--CG-----C--A----CA-G-C
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3043585 20 +   3914936 C--C---TAGG-AA-TG----TTT--C------C--A----CA-C-C
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     7013 21 -     14121 T--T---TGGAG-A-TG----CCG--CA-----C--A----CA-A-T
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437757 21 +   1826925 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            6388  6 +     11245 T--C---CAGG------------------------------------
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1005209  6 +   6120653 T--C---CAGG------------------------------------
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4217858 23 -  43346337 T--C---TAGGA-A-TA----CTT---C-----T--CAAA-AT-T-A
i Loxodonta_africana.GL010049.1                          I 8 C 0
s Lycaon_pictus.CM007581.1                                17955863 20 -  59628241 C--C---TAGG-AA-TG----TTT--C------T--A----TA-T-C
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               7572 21 +     40492 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59676831 21 +  60120075 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13347 21 -     26193 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            81131 21 -    114318 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  6818 21 -     23192 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16291 21 -     29190 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  24856 21 +     37952 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186839945 21 + 187317192 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458508 21 -  25927173 T--C---TAGGG-A-TG----CCT--CA-----C--A----CA-G-C
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  80704 21 +     89720 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 7705 21 +     20474 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   7505 21 -     14993 T--C---TAGGG-A-TG----CCT--CA-----C--A----CA-G-C
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  330371 21 -    668171 T--C---TAGGG-A-TG----CCT--CA-----C--A----CA-G-C
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 5818 21 -     24072 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26443 21 -     45290 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91160 21 +     94391 T--C---TAGG-AA-TG----CTT--CA-----C--A----CG-C-C
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 3
s Mandrillus_leucophaeus.scaffold280                      23938034 21 -  24302211 T--C---TAGGG-A-CG----CCT--CA-----C--A----CG-G-C
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352158 20 +    752769 T--C---T-GGG-A-CG----CCT--CA-----C--A----CG-G-C
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33103610 21 -  40650429 T--C---CAGGA-A-TG----TCT--CA-----C--C----CA-A-C
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        10979 21 -    207569 T--T---TAAG-AA-CG----CTT--CG-----C--A----CA-A-C
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10576 20 +     13704 C--T---TAGG-AA-TC----TTT--T------C--A----CA-C-C
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 33270 19 +    140813 CCCA---TAACA-G-TA----CCT--CA-----A--C----------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12182732 19 -  29670104 TCAA---TAACA-G-TA----CCT--CA-----C--C----------
i Mesocricetus_auratus.KB708134.1                        I 1 C 0
s Mico_argentatus.k141_1239457                                6505 17 -      7380 T--C---TGGGG-G-TG----CCT--CA-----C--A----------
i Mico_argentatus.k141_1239457                           C 0 I 6
s Mico_humeralifer.k141_2457295                                734 17 +      1079 T--C---TGGGG-G-TG----CCT--CA-----C--A----------
i Mico_humeralifer.k141_2457295                          C 0 I 6
s Mico_schneideri.k141_1950671                                      6517 17 -      7356 T--C---TGGGG-G-TG----CCT--CA-----C--A----------
i Mico_schneideri.k141_1950671                                 C 0 I 6
s Microcebus_murinus.CM007674.1                           18292021 20 -  93316391 T--C---C-AAG-A-CA----CCT--GG-----C--A----CA-G-C
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    22834 23 -    145209 T--C---TCAAA-A-TG----CCC---C-----C--CTCA-AT-C-T
i Microgale_talazaci.MicTal_scaffold_6613                I 8 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                16179 20 -     19307 T--G---CAGG--A-AG----CTT--CA-----C--A----TT-A-C
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 3
s Microtus_ochrogaster.CM001695.1                         11260980 19 -  27267610 CCAA---TAACA-G-TG----CTT--CA-----C--C----------
i Microtus_ochrogaster.CM001695.1                        I 1 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1851142 26 +   8254450 T--G---CAGG--AGAG----CTT--CGAGCTTc--g----cc-t-c
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 3
s Miniopterus_schreibersii.MinSch_scaffold_18080             34824 14 +     64694 T--G---CAGG--AGAG----CTT--C--------------------
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 8
s Miopithecus_ogouensis.k141_534055                           9740 21 -     28506 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6453 20 -      8324 C--C---TAGG-AA-TG----TTT--C------C--A----CA-C-C
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      9565 20 -     37649 T--T---C-AGG-A-CA----CCT--AG-----C--A----CA-G-C
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142167 20 -    366855 C--G---CAGG--A-TG----CTT--CG-----C--A----CC-C-C
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 3 I 14
s Mungos_mungo.MunMun_flattened_line_23663                   35963 20 +     37127 T--C---TAGG-AA-TG----TCT--C------C--A----CA-C-C
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           7365 21 +     14753 T--G---CAGG--AATG----CTT--CA-----C--A----CA-A-C
i Murina_feae.MurFea_scaffold_85699                      C 0 I 3
s Mus_caroli.LT608237.1                                   84361881 19 - 120012414 CTTA---TAACA-G-CG----CCT--CA-----C--C----------
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87650876 19 - 129401213 CTTA---TAACA-G-CG----CCT--CA-----C--C----------
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31355533 19 -  89631738 CTTA---TAACA-G-TG----CCT--CA-----C--C----------
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90752939 19 - 130317789 CTTA---TAAGA-G-CG----CCT--CA-----C--C----------
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              5470 21 +     14296 T--T---TAAGA-A-TG----TTT--CA-----C--C----TG-A-C
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               301990 20 -  14710649 C--T---TAGG-AA-TC----TTT--C------C--A----CA-C-C
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71767 17 -     80779 T--C---TAGAA-G-AC----CTCA--G-----C--T----------
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                281008 21 -  10118263 T--G---CAGG--AATG----CTG--TG-----C--A----CA-A-C
i Myotis_brandtii.KE162005.1                             C 0 I 3
s Myotis_davidii.KB100139.1                                1588264 21 -   6019432 T--G---CAGG--ACTG----CTT--CG-----C--A----CA-A-C
i Myotis_davidii.KB100139.1                              C 0 I 3
s Myotis_lucifugus.GL429869.1                              3904362 21 -   4330536 T--G---CAGG--AATG----CTT--CG-----C--A----CA-A-C
i Myotis_lucifugus.GL429869.1                            C 0 I 3
s Myotis_myotis.MyoMyo_scaffold_281845                         511 21 +      1835 T--G---CAGG--AATG----CTT--CG-----C--A----CA-A-C
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 I 3
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189799 21 +    196477 T--C---CGGGA-A-TA----CTT--CA-----C--A----CA-C-A
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2034592 21 -   3037898 T--A---TAACA-G-TG----CCT--TG-----C--C----CT-A-C
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               15742 21 +     21681 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308039 20 +  31847680 C--C---TAGG-AA-TG----TTT--C------C--A----CA-C-C
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    758423 14 +    783361 T--G---CAAT--A-TG----GGT--AG-------------------
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 7
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149927 19 -   9404916 C--C---TAG--AA-TG----TTT--C------T--A----TA-T-C
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102586753  6 - 196305487 T--C---CAGG------------------------------------
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              677  6 +      2075 T--C---CAGG------------------------------------
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105762108  6 + 199412804 T--C---CAGG------------------------------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1364386 21 +   3988456 T--T---TGGAG-T-TT----CCT--CA-----C--A----CA-G-C
i Ochotona_princeps.JH802162.1                           I 4 C 0
s Octodon_degus.JH651603.1                                  747498 16 +  11899542 T--c---tag-t-g-ag----ctc-a-g-----g--g----------
i Octodon_degus.JH651603.1                               I 121 C 0
s Odobenus_rosmarus.KB229312.1                              507181 20 -   2017862 C--T---TAGG-AA-TG----TTT--C------C--A----CA-C-C
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   25649 19 +     28053 CCAA---TAACA-G-TG----CCT--CA-----C--C----------
i Ondatra_zibethicus.OndZib_scaffold_46174               I 1 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    80659 19 +    102263 CCAA---TAACA-G-TA----CCT--CA-----G--C----------
i Onychomys_torridus.OnyTor_scaffold_2986                I 1 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387              10637 23 -     18566 T--C---TAGGA-A-TA----CTT---A-----C--AAAA-CT-T-A
i Orycteropus_afer.OryAfe_flattened_line_144387          I 8 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147873 21 + 174332312 T--T---TGGAG-A-TG----CCG--CA-----C--A----CA-A-T
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462875 20 -    559221 C--T---TAGG-AA-TG----TTT--C------T--A----TA-T-C
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4660  6 +      8798 T--C---CAGG------------------------------------
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696823  6 -   1103335 T--C---CAGG------------------------------------
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    44698 21 +     80009 T--C---TAGGG-A-TG----CCT--CA-----C--A----CA-G-C
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189143599 21 + 189151597 T--C---TAGGG-A-TG----CCT--CA-----C--A----CA-G-C
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  151690 20 +    230217 T--C---TAGG-AA-TG----TCT--C------C--A----CA-C-C
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                264899 20 +  18783137 T--C---TAGG-AA-TG----TCT--C------C--A----CA-C-C
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4721778 20 -   8748460 T--C---TAGG-AA-TG----TCT--C------C--A----CA-C-C
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183443834 21 + 183742232 T--C---TATGG-A-CG----CCT--CA-----C--A----CA-G-C
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7480 21 +     20448 T--C---TATGG-A-TG----CCT--CA-----C--A----CA-G-C
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20564292 21 +  20919399 T--C---TATGG-A-CG----CCT--CA-----C--A----CA-G-C
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6224 21 +     41871 T--C---TATGG-A-CG----CCT--CA-----C--A----CA-G-C
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     9517 21 +     27711 T--C---TATGG-A-CG----CCT--CA-----C--A----CA-G-C
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                   514 21 -     11374 T--C---TATGG-A-CG----CCT--CA-----C--A----CA-G-C
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13192 16 -     78924 ---------AG-AA-TG----TCT--C------C--A----CA-C-C
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10649  4 +     13100 -------CAGG------------------------------------
i Perodicticus_ibeanus.k141_855320                       I 1 C 0
s Perodicticus_potto.k141_1092580                             9043  4 +     25941 -------CAGG------------------------------------
i Perodicticus_potto.k141_1092580                        I 1 C 0
s Peromyscus_maniculatus.KI615324.1                       18195284 19 -  18517816 CCAA---TAACA-G-TA----CCT--CA-----C--C----------
i Peromyscus_maniculatus.KI615324.1                      I 1 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28650 19 -     29689 T--T---TACCA-T-GT----CTCACCT-----G--G----------
i Petromus_typicus.PetTyp_scaffold_42190                 I 5 C 0
s Piliocolobus_badius.k141_1234363                           44233 21 +     62158 T--C---TAGGG-A-CG----CCT--CG-----C--A----CA-G-C
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        38980 21 +     89929 T--C---TAGGG-A-CG----CCT--TG-----C--A----CA-G-C
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40396 21 +     51399 T--C---TAGGG-A-CG----CCT--TG-----C--A----CA-G-C
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296634 21 -  14605196 T--C---TAGGG-A-CG----CCT--CG-----C--A----CA-G-C
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2301 21 +     22620 T--G---CAGG--AATG----CTT--TG-----G--A----CA-A-C
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 4
s Pongo_abelii.CM009266.2                                189131737 21 + 189387572 T--C---TAGGG-A-TG----CCT--CA-----C--G----CA-G-C
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9571344 21 +   9816681 T--C---TAGGG-A-TG----CCT--CA-----C--G----CA-G-C
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               73918 21 -     81375 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              5738 21 +     19060 T--C---TAGGG-A-TG----CCT--CA-----C--A----CA-G-C
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 13877 23 -     22811 T--C---TAGCA-A-TA----CTT---C-----C--CTAA-GT-C-A
i Procavia_capensis.ProCapCap_scaffold_85530             I 6 C 0
s Prolemur_simus.MPIZ01000396.1                            2597275 20 -   4620579 t--c---c-agg-A-CA----CCT--CG-----C--A----CA-G-C
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     991261 20 +   2598838 t--c---c-agg-A-CA----CCT--CG-----C--A----CA-G-C
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29573 20 +     38485 T--C---C-AGG-A-CA----CCT--TG-----C--A----CA-G-C
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1615 20 -     13098 T--C---C-AGG-A-CA----CCT--CG-----C--A----CA-G-C
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          27094 20 +     35766 T--C---C-AGG-A-CA----CCT--CG-----C--A----CA-G-C
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           5281 20 -     24134 T--C---C-AGG-A-CA----CCT--CG-----C--A----CA-G-C
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        29106 20 -     67325 T--C---C-AGG-A-CA----CCT--CG-----C--A----CA-G-C
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           5329 20 -      6182 T--C---C-AGG-A-CA----CCT--CG-----C--A----CA-G-C
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            10916 19 -     21651 CCCA---TAACA-G-TA----CCT--CA-----A--C----------
i Psammomys_obesus.NESX01036370.1                        I 1 C 0
s Pteronotus_parnellii.KE909381.1                            15618 20 -     21811 T--G---CGGG--A-TG----CTT--CG-----C--A----CC-A-C
i Pteronotus_parnellii.KE909381.1                        I 3 I 55
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40770 20 +     42204 C--T---TAGG-AA-TC----TTT--C------C--A----CA-C-C
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22977309 21 +  28871421 T--C---TAGG-AA-TG----CTT--CA-----C--A----CA-A-C
i Pteropus_alecto.KB030862.1                             C 0 I 3
s Pteropus_vampyrus.KN534172.1                                7362 21 -      8028 T--C---TAGG-AA-TG----CTT--CG-----C--A----CA-A-C
i Pteropus_vampyrus.KN534172.1                           C 0 I 3
s Puma_concolor.QAVW01001104.1                            20274849 20 -  38429054 T--C---TAGG-AA-TG----TCT--C------C--A----CA-C-C
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15724 21 -     91421 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7609844 21 +   7812017 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             15723 21 -     72585 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53571131 19 +  90668790 CTCA---TAACA-A-TG----CCT--GT-----C--C----------
i Rattus_norvegicus.chr16                                I 3 C 0
s Rhinopithecus_bieti.k119_217274                             7434 21 -     11128 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236783 21 - 195417433 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672439 21 +   7961872 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88350 21 -     96226 T--C---TATG-AA-CG----CTT--CA-----C--A----CG-A-C
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 3
s Saguinus_bicolor.k141_8081                                   886 19 +     42994 T--C---TGGGG-G-TG----CCT--CA-----C--A----CA----
i Saguinus_bicolor.k141_8081                             C 0 I 1
s Saguinus_imperator.k141_57697                                671 19 +      1030 T--C---TGGGG-G-TG----CCT--CA-----C--A----CG----
i Saguinus_imperator.k141_57697                          C 0 I 1
s Saguinus_inustus.k141_3945547                                750 19 -      8737 T--C---TGGGG-G-TG----CCT--CA-----C--A----CG----
i Saguinus_inustus.k141_3945547                          C 0 I 1
s Saguinus_labiatus.k141_285685                               8510  1 +      8564 ---------------------t-------------------------
i Saguinus_labiatus.k141_285685                          I 5 C 0
s Saguinus_midas.LG03                                    209470237 19 + 209938924 T--C---TGGGG-G-TG----CCT--CA-----C--A----CG----
i Saguinus_midas.LG03                                    C 0 I 1
s Saguinus_mystax.k141_374627                                 8872 10 -      9399 T--C---TGGGG-G-TG------------------------------
i Saguinus_mystax.k141_374627                            C 0 I 216
s Saimiri_boliviensis.NW_024100920.1                     119951582 19 - 121099817 T--C---TGGGG-G-TG----CCT--CA-----C--A----CG----
i Saimiri_boliviensis.NW_024100920.1                     C 0 I 1
s Saimiri_cassiquiarensis.k141_2188234                       23924 19 +     46362 T--C---TGGGG-G-TG----CCT--CA-----C--A----CG----
i Saimiri_cassiquiarensis.k141_2188234                   C 0 I 1
s Saimiri_macrodon.k141_716185                               24019 19 +     45824 T--C---TGGGG-G-TG----CCT--CA-----C--A----CG----
i Saimiri_macrodon.k141_716185                           C 0 I 1
s Saimiri_oerstedii.k141_1487881                             40698 19 -     64574 T--C---TGGGG-G-TG----CCT--CA-----C--A----CG----
i Saimiri_oerstedii.k141_1487881                         C 0 I 1
s Saimiri_sciureus.k141_2278166                               3771 19 -     23631 T--C---TGGGG-G-TG----CCT--CA-----C--A----CG----
i Saimiri_sciureus.k141_2278166                          C 0 I 1
s Saimiri_ustus.k141_1484609                                 23915 19 -     61129 T--C---TGGGG-G-TG----CCT--CA-----C--A----CG----
i Saimiri_ustus.k141_1484609                             C 0 I 1
s Sapajus_apella.ctg103                                    5421288 19 -   5703754 T--C---TGGGG-G-TG----CCT--CG-----C--A----CG----
i Sapajus_apella.ctg103                                  C 0 I 1
s Sapajus_macrocephalus.k141_351809                          56529 19 -     80660 T--C---TGGGG-G-TG----CCT--CG-----C--A----CG----
i Sapajus_macrocephalus.k141_351809                      C 0 I 1
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153721 21 -    313613 T--T---GAAG--A-TG----CTT--CA-----C--A----CAAG-C
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                          615 21 -     12572 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27465 21 +     39453 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            7983 21 +     27826 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             7505 21 -     19483 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                       806 21 -     12762 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                            667 21 +     13763 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                      812 19 -     30804 CCCA---AAACA-G-TG----ACT--CA-----C--C----------
i Sigmodon_hispidus.SigHis_scaffold_42075                I 1 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               4303  7 +   1910179 C--C---TGGG--A---------------------------------
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13651537  5 -  18376816 C--C---AGA-------------------------------------
i Sorex_araneus.JH798187.1                               C 0 I 15
s Spermophilus_dauricus.KZ294078.1                         1954466 21 -   3870691 T--C---CAGGA-A-TG----TCT--CA-----C--C----CA-A-C
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             31261 20 +     97271 C--C---TAGA-AA-TC----TTT--C------T--A----CA-C-C
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              18867 20 -    196729 T--C---TAGG-AA-TG----TCT--C------C--A----CA-C-C
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6811347 24 +  69701581 T--CTCTGAGA--A-TG----CTT--CA-----C--A-C--GA-C-C
i Sus_scrofa.CM000828.4                                  I 1 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                11361  6 +     41958 ---------------------------------C--A----CA-G-C
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 6 I 3
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73158 21 +    116680 T--C---CAGGA-A-TT----TTT--CA-----C--A----CA-C-A
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      119322 15 -    156842 ---------GG--A-AT----GCT--T------T--G----CA-c-a
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387774 19 +    539355 T--C---TAGG--G-AT----GCT--T------T--G----CA-c-a
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               27007 21 +     70052 T--C---TGGGG-G-TG----CCT--CC-----C--A----CA-G-C
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1804 21 -     16117 T--C---TGGGG-G-TG----CCT--CC-----C--A----CA-G-C
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186429152 21 + 186847797 T--C---TATGG-A-TG----CCT--CA-----C--A----CA-G-C
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105963 13 +    114563 T--C---TAAGA-T-GT----CTC-----------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 1
s Tolypeutes_matacus.TolMat_scaffold_228639                   6930 15 +      8208 T--C---TAGGC-A-TG----CCT--CC-------------------
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81730 20 +    610378 T--G---CAGA--C-TG----CTT--CA-----C--A----TT-A-C
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 3
s Trachypithecus_auratus.k141_722599                         11556 21 -     20410 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                       670 21 -     12674 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       11657 21 +     19930 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       8068 21 -     19997 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48207 21 -     60166 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        15679 21 -     27529 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     15623 21 -     18194 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9335 21 -     21137 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    8038 21 -     10723 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7210 21 +      9834 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        25523 21 +     32220 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5939625 21 +   6242583 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        8876 21 +     20839 T--C---TAGGG-A-CG----CCT--CA-----C--A----CA-G-C
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4293780 23 +  10818551 T--C---TAGGA-A-TA----CGT---C-----C--CAGA-AT-T-A
i Trichechus_manatus.JH594705.1                          I 8 C 0
s Tupaia_chinensis.KB320699.1                              2156346 21 +   4065304 T--C---TGAGA-A-CG----CCT--CT-----C--T----CC-A-C
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9789 21 -     10553 T--C---TGAAA-A-CG----CCT--CT-----C--A----CC-A-C
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   53832 21 -     77625 T--C---TAAG--A-TG----CCT--CA-----T--A----CAAG-C
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4850975 20 -   5085361 C--C---TAGG-AA-TG----TTT--C------C--T----CA-C-C
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  11940 20 +     50397 T--C---C-AGG-A-CA----CCT--TG-----C--A----CA-G-C
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             11999 20 +     24756 T--C---C-AGG-A-CA----CCT--TG-----C--A----CA-G-C
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 11327 19 -     43706 C--C---TAG--AA-TG----TTT--C------T--A----TA-T-C
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          1587 21 +    224448 T--C---CAGGA-A-CG----ACT--CA-----C--C----CA-A-C
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      15425 21 +     63895 T--C---TCAGA-G-TG----CCT--CA-----C--C----CA-G-C
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vicugna_pacos.KN270157.1                                 5372411  6 -   5488506 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50964  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18978  0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Camelus_ferus.KB017975.1                                  403651  6 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2335354  6 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10002878  6 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       7376 3 +     62944 CA-----C
s Acinonyx_jubatus.LLWD01001279.1                           827862 1 -   1699592 A-------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511134 1 -  29979442 A-------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             79904 1 -    347723 A-------
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     75046 2 -     89534 TA------
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 7
s Allenopithecus_nigroviridis.k141_3361533                   15304 3 -     52922 CA-----T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15220 3 -     28001 CA-----T
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          5718 3 -     18505 CA-----T
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           6570 3 -     12518 CA-----T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              8164 3 +     51355 CA-----C
i Alouatta_belzebul.k141_3560514                         I 1 C 0
s Alouatta_caraya.k141_1701091                                1273 3 -     36483 CA-----C
i Alouatta_caraya.k141_1701091                           I 1 C 0
s Alouatta_discolor.k141_566626                              11722 3 +     28687 CA-----C
i Alouatta_discolor.k141_566626                          I 1 C 0
s Alouatta_juara.k141_1302312                                  238 3 +     27940 CA-----C
i Alouatta_juara.k141_1302312                            I 1 C 0
s Alouatta_macconnelli.k141_918386                            1282 3 -      9457 CA-----C
i Alouatta_macconnelli.k141_918386                       I 1 C 0
s Alouatta_nigerrima.k141_1929159                              238 3 +     30492 CA-----C
i Alouatta_nigerrima.k141_1929159                        I 1 C 0
s Alouatta_palliata.k141_2135620                              4233 3 +     47717 CA-----C
i Alouatta_palliata.k141_2135620                         I 1 C 0
s Alouatta_puruensis.k141_362188                               965 3 +      5663 CA-----C
i Alouatta_puruensis.k141_362188                         I 1 C 0
s Alouatta_seniculus.k141_117119                             15417 3 +     50774 CA-----C
i Alouatta_seniculus.k141_117119                         I 1 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185907 1 +    412891 C-------
i Anoura_caudifer.AnoCau_scaffold_1412                   I 3 C 0
s Aotus_azarae.k141_3104676                                  16164 3 -     33861 CA-----G
i Aotus_azarae.k141_3104676                              I 1 C 0
s Aotus_griseimembra.k141_2240599                            16210 3 -     34016 CA-----G
i Aotus_griseimembra.k141_2240599                        I 1 C 0
s Aotus_nancymaae.KZ198451.1                               4298588 3 -   5030052 CA-----G
i Aotus_nancymaae.KZ198451.1                             I 1 C 0
s Aotus_trivirgatus.k141_2152450                             16197 3 -     34685 CA-----G
i Aotus_trivirgatus.k141_2152450                         I 1 C 0
s Aotus_vociferans.k141_344750                               29322 3 -     47192 CA-----G
i Aotus_vociferans.k141_344750                           I 1 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13151 2 +     20879 CC------
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 2
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5297 1 +     43469 C-------
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 3 C 0
s Avahi_laniger.k141_765380                                  54237 3 -     92717 CG-----C
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54868 3 +     85213 CG-----C
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             6011 3 -     10423 CA-----C
i Callibella_humilis.k141_1278103                        I 1 I 78
s Callimico_goeldii.k141_1091182                             25480 3 +     31915 CA-----C
i Callimico_goeldii.k141_1091182                         I 1 C 0
s Callithrix_jacchus.pat_scaffold_3                       23591165 3 - 189096842 CA-----c
i Callithrix_jacchus.pat_scaffold_3                      I 1 I 624
s Callithrix_kuhlii.k119_1168854                               564 3 -     12329 CA-----C
i Callithrix_kuhlii.k119_1168854                         I 1 I 39
s CanFam4.chr16                                           17799724 1 -  60362399 A-------
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                      472 1 -     43241 A-------
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9035167 1 -   9314153 A-------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17959643 1 -  59632846 A-------
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18500940 1 +  63665305 A-------
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1586 3 -     12242 -CC----A
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 2
s Carlito_syrichta.NW_007259797.1                           156535 3 -    496798 CC-----C
i Carlito_syrichta.NW_007259797.1                        C 0 I 2
s Carollia_perspicillata.CarPer_scaffold_92756                5662 1 -     11696 C-------
i Carollia_perspicillata.CarPer_scaffold_92756           I 3 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137640 8 +    179628 CACTGGCT
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     93624 1 +    217609 a-------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                         10646 3 -     11392 CA-----C
i Cebuella_niveiventris.k141_1251222                     I 1 I 78
s Cebuella_pygmaea.k141_1309012                               6713 3 -      7577 CA-----C
i Cebuella_pygmaea.k141_1309012                          I 1 I 78
s Cebus_albifrons.Contig27                                25653354 3 +  26074798 CG-----C
i Cebus_albifrons.Contig27                               I 1 C 0
s Cebus_olivaceus.k141_1764483                                1292 3 +     28840 CG-----C
i Cebus_olivaceus.k141_1764483                           I 1 C 0
s Cebus_unicolor.k141_1837183                                 1017 3 +     14051 CG-----C
i Cebus_unicolor.k141_1837183                            I 1 C 0
s Cephalopachus_bancanus.k141_1423433                         6033 3 +     31688 CC-----C
i Cephalopachus_bancanus.k141_1423433                    C 0 I 2
s Ceratotherium_simum.JH767749.1                          12232009 1 +  27778364 a-------
i Ceratotherium_simum.JH767749.1                         C 0 I 2
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3036 1 -     25243 a-------
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 I 2
s Cercocebus_atys.KQ010504.1                               4476235 3 +   4669795 CA-----C
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                         737 3 +     17872 CA-----C
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           1394 3 -     14043 CA-----C
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9427 3 +     27781 CA-----C
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         9595 3 -     20310 CA-----C
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          12575 3 +     29689 CA-----T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7325 3 -     20078 CA-----C
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          15243 3 -     27936 CA-----C
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            4113 3 -     17152 CA-----C
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38817654 3 +  39242232 CA-----C
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223343 3 -  21565898 CA-----C
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40462 3 -     53127 CA-----C
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                         713 3 +     13442 CA-----C
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15262 3 -     27947 CA-----C
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         15238 3 +     17596 CA-----C
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          1285 3 +     14005 CA-----C
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheirogaleus_major.k141_333249                             21617 3 -     52598 CA-----C
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16982 3 +     57038 CA-----C
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1253461 3 +   2543920 -CC----A
i Chinchilla_lanigera.JH722012.1                         C 0 I 2
s Chiropotes_albinasus.k141_2206961                            912 2 -     15524 CA------
i Chiropotes_albinasus.k141_2206961                      I 1 I 506
s Chlorocebus_aethiops.ctg25                              18429222 3 -  18827391 CA-----T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15659 3 -     50209 CA-----T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422659 3 + 135778131 CA-----T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 18868 2 +     19366 CC------
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            173945 2 +    839153 CC------
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1911172 2 +   2368649 CA------
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949424 2 + 200372422 CA------
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37706 2 +     84244 CA------
i Colobus_polykomos.k141_906115                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               3522 1 -     19598 C-------
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29049 1 -     87169 A-------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837629 4 +   1526836 CCC----A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  36457 3 +     51376 -CC----A
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 2
s Desmodus_rotundus.KZ672289.1                             8630678 1 +  20541912 C-------
i Desmodus_rotundus.KZ672289.1                           I 3 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673858 1 +   1390856 a-------
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 2
s Diceros_bicornis.DicBicMic_scaffold_5955                    6609 1 +    198055 a-------
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 2
s Echinops_telfairi.JH980293.1                            48781155 2 + 111700974 CC------
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.KE759718.1                                  11093 1 +     11740 C-------
i Eidolon_helvum.KE759718.1                              I 3 C 0
s Enhydra_lutris.KZ291758.1                               16329861 1 -  41312741 A-------
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2146291 1 -  14770903 c-------
i Eptesicus_fuscus.JH977646.1                            I 3 I 1
s Equus_asinus.JREZ01000139.1                              1284117 1 +   4378816 a-------
i Equus_asinus.JREZ01000139.1                            C 0 I 2
s Equus_caballus.CM000403.2                               18531937 1 -  39960074 a-------
i Equus_caballus.CM000403.2                              C 0 I 2
s Equus_przewalskii.KK951119.1                               33966 1 +    498745 a-------
i Equus_przewalskii.KK951119.1                           C 0 I 2
s Erinaceus_europaeus.JH835339.1                           3328801 1 -   7059049 A-------
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21205827 3 -  21539334 CA-----T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_576796                              40662 3 -     44621 CA-----C
i Eulemur_albifrons.k141_576796                          C 0 C 0
s Eulemur_collaris.k141_377015                                7043 3 -     16928 CA-----C
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              16075 3 -     25546 CA-----C
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            13271 3 +     26330 CA-----C
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14506 3 +     23973 CA-----C
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                13268 3 +     75513 ca-----c
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 11198 3 +     97555 ca-----c
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              689 3 +     13026 CA-----C
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4742 3 -     17153 CA-----C
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              14315 3 +    111500 ca-----c
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237504 1 + 206538554 A-------
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20196347 1 + 205367284 A-------
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 10100 1 -     36744 A-------
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             850987 3 +   3816255 -c----ca
i Fukomys_damarensis.KN121974.1                          C 0 I 2
s Galeopterus_variegatus.GalVar_scaffold_108840               1753 3 -      9135 CA-----T
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            31920 4 +     49224 CCC----C
i Glis_glis.GliGli_scaffold_19807                        C 0 I 1
s Gorilla_beringei.k141_3596273                              16631 3 -     32273 CA-----C
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186338767 3 + 186649187 CA-----C
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33165 4 +     78134 CCC----C
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           7370 3 -     19426 CA-----C
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12523 3 -     15286 CA-----C
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             14162 3 +     18253 CA-----C
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         14263 3 -     41752 CA-----C
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         14100 3 -     16460 CA-----C
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242884 1 +    327341 A-------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20662744 3 +  22651954 -CC----A
i Heterocephalus_glaber.JH602082.1                       C 0 I 2
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1445 2 +      7595 CT------
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hoolock_leuconedys.ctg274                                    435427 3 +    630532 CA-----C
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45584 1 +     55795 A-------
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83643 3 +    135385 -CC----A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7521434 2 -   7955117 CC------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 2
s Indri_indri.k141_3655594                                   23060 3 +     31101 CA-----C
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8277354 2 -   9596543 TA------
i Jaculus_jaculus.JH725527.1                             C 0 I 7
s Lasiurus_borealis.LasBor_scaffold_32767                    16935 1 -     42476 C-------
i Lasiurus_borealis.LasBor_scaffold_32767                I 3 I 1
s Lemur_catta.scaffold_24                                 15524615 3 -  30322482 ca-----c
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        8290 3 +     64341 CA-----C
i Leontocebus_fuscicollis.k141_1820339                   I 1 C 0
s Leontocebus_illigeri.k141_1304848                            630 3 -     35062 CA-----C
i Leontocebus_illigeri.k141_1304848                      I 1 C 0
s Leontocebus_nigricollis.k141_4610752                        8318 3 +     35603 CA-----C
i Leontocebus_nigricollis.k141_4610752                   I 1 C 0
s Leontopithecus_chrysomelas.k141_1519602                    29732 3 +     38576 CA-----C
i Leontopithecus_chrysomelas.k141_1519602                I 1 I 268
s Leontopithecus_rosalia.k141_464620                         26432 3 +     66356 CA-----C
i Leontopithecus_rosalia.k141_464620                     I 1 I 282
s Lepilemur_ankaranensis.k141_596936                         11506 3 -     23766 CA-----C
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29567 3 +     45836 CA-----C
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          2105 3 +     25010 CA-----C
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27503 3 +     54090 CA-----C
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3043605 1 +   3914936 A-------
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     7034 4 -     14121 CCC----C
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437778 3 +   1826925 CA-----C
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                            4217881 2 -  43346337 CT------
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17955883 1 -  59628241 A-------
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               7593 3 +     40492 CA-----T
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59676852 3 +  60120075 CA-----T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13368 3 -     26193 CA-----T
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            81152 3 -    114318 CA-----T
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  6839 3 -     23192 CA-----T
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16312 3 -     29190 CA-----T
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  24877 3 +     37952 CA-----T
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186839966 3 + 187317192 CA-----T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458529 3 -  25927173 CA-----T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  80725 3 +     89720 CA-----T
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 7726 3 +     20474 CA-----T
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   7526 3 -     14993 CA-----T
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  330392 3 -    668171 CA-----T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 5839 3 -     24072 CA-----T
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26464 3 -     45290 CA-----T
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91184 1 +     94391 T-------
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 3 C 0
s Mandrillus_leucophaeus.scaffold280                      23938055 3 -  24302211 CA-----C
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352178 3 +    752769 CA-----C
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33103631 2 -  40650429 CC------
i Marmota_marmota.CZRN01000018.1                         C 0 I 2
s Mellivora_capensis.MelCap_flattened_line_69365             10596 1 +     13704 A-------
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Microcebus_murinus.CM007674.1                           18292041 3 -  93316391 CA-----C
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    22857 2 -    145209 TC------
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                16202 1 -     19307 C-------
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 3 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1851171 1 +   8254450 c-------
i Miniopterus_natalensis.LDJU01000034.1                  I 3 I 1
s Miniopterus_schreibersii.MinSch_scaffold_18080             34846 1 +     64694 C-------
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 8 I 1
s Miopithecus_ogouensis.k141_534055                           9761 3 -     28506 CA-----T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6473 1 -      8324 A-------
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      9585 3 -     37649 CC-----C
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142201 1 -    366855 C-------
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 14 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35983 1 +     37127 A-------
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           7389 1 +     14753 C-------
i Murina_feae.MurFea_scaffold_85699                      I 3 I 1
s Muscardinus_avellanarius.MusAve_scaffold_82313              5491 4 +     14296 CTC----C
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               302010 1 -  14710649 G-------
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71784 3 -     80779 -CC----A
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 I 2
s Myotis_brandtii.KE162005.1                                281032 1 -  10118263 C-------
i Myotis_brandtii.KE162005.1                             I 3 I 1
s Myotis_davidii.KB100139.1                                1588288 1 -   6019432 C-------
i Myotis_davidii.KB100139.1                              I 3 I 1
s Myotis_lucifugus.GL429869.1                              3904386 1 -   4330536 C-------
i Myotis_lucifugus.GL429869.1                            I 3 I 1
s Myotis_myotis.MyoMyo_scaffold_281845                         535 1 +      1835 C-------
i Myotis_myotis.MyoMyo_scaffold_281845                   I 3 I 1
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189820 2 +    196477 CC------
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2034613 1 -   3037898 C-------
i Nannospalax_galili.KL204047.1                          C 0 I 3
s Nasalis_larvatus.k141_413338                               15763 3 +     21681 CA-----C
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308059 1 +  31847680 A-------
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    758444 1 +    783361 G-------
i Noctilio_leporinus.NocLep_scaffold_251                 I 7 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149946 1 -   9404916 A-------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Ochotona_princeps.JH802162.1                             1364407 4 +   3988456 CT-T---C
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  747514 3 +  11899542 -c----ca
i Octodon_degus.JH651603.1                               C 0 I 2
s Odobenus_rosmarus.KB229312.1                              507201 1 -   2017862 A-------
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387              10660 2 -     18566 CT------
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147894 4 + 174332312 CAC----C
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462895 1 -    559221 A-------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Pan_paniscus.KQ411613.1                                    44719 3 +     80009 CT-----C
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189143620 3 + 189151597 CA-----C
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  151710 1 +    230217 A-------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                264919 1 +  18783137 A-------
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4721798 1 -   8748460 A-------
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183443855 3 + 183742232 CA-----C
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7501 3 +     20448 CA-----C
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20564313 3 +  20919399 CA-----C
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6245 3 +     41871 CA-----C
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     9538 3 +     27711 CA-----C
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                   535 3 -     11374 CA-----C
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13208 1 -     78924 A-------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28669 3 -     29689 -CC----A
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Piliocolobus_badius.k141_1234363                           44254 3 +     62158 CA-----C
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        39001 3 +     89929 CA-----C
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40417 3 +     51399 CA-----C
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296655 3 -  14605196 CA-----C
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189131758 3 + 189387572 CA-----C
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9571365 3 +   9816681 CA-----C
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               73939 3 -     81375 CA-----C
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              5759 3 +     19060 CT-----C
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 13900 2 -     22811 TT------
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2597295 3 -   4620579 CA-----C
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     991281 3 +   2598838 CA-----C
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29593 3 +     38485 CA-----C
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1635 3 -     13098 CA-----C
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          27114 3 +     35766 CA-----C
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           5301 3 -     24134 CA-----C
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        29126 3 -     67325 CA-----C
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           5349 3 -      6182 CA-----C
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            15693 1 -     21811 C-------
i Pteronotus_parnellii.KE909381.1                        I 55 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40790 1 +     42204 G-------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22977333 1 +  28871421 C-------
i Pteropus_alecto.KB030862.1                             I 3 C 0
s Pteropus_vampyrus.KN534172.1                                7386 1 -      8028 C-------
i Pteropus_vampyrus.KN534172.1                           I 3 C 0
s Puma_concolor.QAVW01001104.1                            20274869 1 -  38429054 A-------
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15745 3 -     91421 CA-----C
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7609865 3 +   7812017 CA-----C
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             15744 3 -     72585 CA-----C
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             7455 3 -     11128 CA-----C
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236804 3 - 195417433 CA-----C
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672460 3 +   7961872 CA-----C
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88374 1 -     96226 C-------
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 3 C 0
s Saguinus_bicolor.k141_8081                                   906 3 +     42994 CA-----c
i Saguinus_bicolor.k141_8081                             I 1 I 464
s Saguinus_imperator.k141_57697                                691 3 +      1030 CA-----C
i Saguinus_imperator.k141_57697                          I 1 C 0
s Saguinus_inustus.k141_3945547                                770 3 -      8737 CA-----C
i Saguinus_inustus.k141_3945547                          I 1 C 0
s Saguinus_midas.LG03                                    209470257 3 + 209938924 CA-----c
i Saguinus_midas.LG03                                    I 1 I 491
s Saimiri_boliviensis.NW_024100920.1                     119951602 3 - 121099817 CG-----C
i Saimiri_boliviensis.NW_024100920.1                     I 1 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23944 3 +     46362 CG-----C
i Saimiri_cassiquiarensis.k141_2188234                   I 1 C 0
s Saimiri_macrodon.k141_716185                               24039 3 +     45824 CG-----C
i Saimiri_macrodon.k141_716185                           I 1 C 0
s Saimiri_oerstedii.k141_1487881                             40718 3 -     64574 CG-----C
i Saimiri_oerstedii.k141_1487881                         I 1 C 0
s Saimiri_sciureus.k141_2278166                               3791 3 -     23631 CG-----C
i Saimiri_sciureus.k141_2278166                          I 1 C 0
s Saimiri_ustus.k141_1484609                                 23935 3 -     61129 CG-----C
i Saimiri_ustus.k141_1484609                             I 1 C 0
s Sapajus_apella.ctg103                                    5421308 3 -   5703754 CG-----C
i Sapajus_apella.ctg103                                  I 1 C 0
s Sapajus_macrocephalus.k141_351809                          56549 3 -     80660 CG-----C
i Sapajus_macrocephalus.k141_351809                      I 1 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153742 1 -    313613 A-------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                          636 3 -     12572 CA-----C
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27486 3 +     39453 CA-----C
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            8004 3 +     27826 CA-----C
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             7526 3 -     19483 CA-----C
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                       827 3 -     12762 CA-----C
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                            688 3 +     13763 CA-----C
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               4310 1 +   1910179 A-------
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13651557 1 -  18376816 G-------
i Sorex_araneus.JH798187.1                               I 15 C 0
s Spermophilus_dauricus.KZ294078.1                         1954487 2 -   3870691 CC------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 2
s Spilogale_gracilis.SpiGra_flattened_line_13525             31281 1 +     97271 A-------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              18887 1 -    196729 A-------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6811371 1 +  69701581 A-------
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                11370 1 +     41958 C-------
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 3 I 4
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73179 2 +    116680 CC------
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      119337 1 -    156842 a-------
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 2
s Tapirus_terrestris.TapTer_scaffold_755                    387793 1 +    539355 a-------
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 2
s Tarsius_lariang.k141_2201908                               27028 3 +     70052 CC-----C
i Tarsius_lariang.k141_2201908                           C 0 I 2
s Tarsius_wallacei.k141_254427                                1825 3 -     16117 CC-----C
i Tarsius_wallacei.k141_254427                           C 0 I 2
s Theropithecus_gelada.CM009954.1                        186429173 3 + 186847797 CA-----C
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81753 1 +    610378 C-------
i Tonatia_saurophila.TonSau_scaffold_294                 I 3 C 0
s Trachypithecus_auratus.k141_722599                         11577 3 -     20410 CA-----C
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                       691 3 -     12674 CA-----C
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       11678 3 +     19930 CA-----C
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       8089 3 -     19997 CA-----C
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48228 3 -     60166 CA-----C
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        15700 3 -     27529 CA-----C
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     15644 3 -     18194 CA-----C
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9356 3 -     21137 CA-----C
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    8059 3 -     10723 CA-----C
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7231 3 +      9834 CA-----C
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        25544 3 +     32220 CA-----C
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5939646 3 +   6242583 CA-----C
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        8897 3 +     20839 CA-----C
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4293803 1 +  10818551 C-------
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2156367 3 +   4065304 CC-----C
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9810 3 -     10553 CC-----C
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   53853 1 -     77625 A-------
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4850995 1 -   5085361 A-------
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  11960 3 +     50397 CA-----C
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             12019 3 +     24756 CA-----C
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 11346 1 -     43706 A-------
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          1608 2 +    224448 CC------
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 2
s Zapus_hudsonius.ZapHud_scaffold_11398                      15446 2 +     63895 TA------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 7
e Otolemur_garnettii.GL873799.1                             696829 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         4666 0 +      8798 C
e Galago_senegalensis.k141_631886                             4836 0 +     11339 C
e Galago_moholi.ctg2040                                     427146 0 -    453645 C
e Saguinus_mystax.k141_374627                                 8882 216 -      9399 I
e Saguinus_labiatus.k141_285685                               8511 0 +      8564 C
e Mico_schneideri.k141_1950671                                      6534 6 -      7356 I
e Mico_humeralifer.k141_2457295                                751 6 +      1079 I
e Mico_argentatus.k141_1239457                                6522 6 -      7380 I
e Mus_pahari.LT608297.1                                   31355552 0 -  89631738 C
e Mus_spretus.CM004101.1                                  90752958 0 - 130317789 C
e Mus_musculus.chr8                                       87650895 0 - 129401213 C
e Mus_caroli.LT608237.1                                   84361900 0 - 120012414 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Loris_tardigradus.ctg83                                  1005215 0 +   6120653 C
e Loris_lydekkerianus.k141_2539221                            6394 0 +     11245 C
e Perodicticus_potto.k141_1092580                             9047 0 +     25941 C
e Perodicticus_ibeanus.k141_855320                           10653 0 +     13100 C
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vicugna_pacos.KN270157.1                                 5372411 6 -   5488506 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   6945 0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              105976 1 +    114563 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sigmodon_hispidus.SigHis_scaffold_42075                      831 0 -     30804 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53571150 0 +  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Psammomys_obesus.NESX01036370.1                            10935 0 -     21651 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             2322 4 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Peromyscus_maniculatus.KI615324.1                       18195303 0 -  18517816 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80678 0 +    102263 C
e Ondatra_zibethicus.OndZib_scaffold_46174                   25668 0 +     28053 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105762114 0 + 199412804 C
e Nycticebus_coucang.k141_1127096                              683 0 +      2075 C
e Nycticebus_bengalensis.LG01                            102586759 0 - 196305487 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Microtus_ochrogaster.CM001695.1                         11260999 0 -  27267610 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182751 0 -  29670104 C
e Meriones_unguiculatus.MerUng_scaffold_7390                 33289 0 +    140813 C
e Megaderma_lyra.MegLyr_scaffold_4542                        11000 0 -    207569 C
e Manis_pentadactyla.KN006162.1                              50964 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18978 0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Galagoides_demidoff.k141_1711393                            2134 0 +     41679 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Ellobius_talpinus.LOJH01081419.1                             950 0 +      8657 C
e Ellobius_lutescens.LOEQ01008920.1                          21046 0 -    110024 C
e Elephantulus_edwardii.JH947257.1                         1098318 0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    36949 0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Daubentonia_madagascariensis.ctg71                      12537826 0 -  12879189 C
e Dasypus_novemcinctus.JH564415.1                            64076 0 +   2246927 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cricetulus_griseus.LT883664.1                           11668095 0 + 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_18520                 50576 0 +     63868 C
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          14965 0 -     20389 C
e Condylura_cristata.JH655891.1                           17548630 0 -  53390261 C
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1053 0 -      8501 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Camelus_ferus.KB017975.1                                  403651 6 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2335354 6 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10002878 6 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Arctocebus_calabarensis.k141_2318572                       11997 0 +     14667 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     71342 0 +     87051 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       7379 6 +     62944 CC--CG--A---C
s Acinonyx_jubatus.LLWD01001279.1                           827863 7 -   1699592 CC-TTT--C---T
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     71342 2 +     87051 --------A---C
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511135 7 -  29979442 CC-CTT--A---C
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             79905 7 -    347723 TC-CTT--A---C
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     75055 8 -     89534 -C--TG--GTAGA
i Allactaga_bullata.AllBul_scaffold_9566                 I 7 C 0
s Allenopithecus_nigroviridis.k141_3361533                   15307 6 -     52922 CC--CA--A---C
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15223 6 -     28001 CC--CA--A---C
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          5721 6 -     18505 CC--CA--A---C
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           6573 6 -     12518 CC--CA--A---C
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              8167 6 +     51355 TC--CG--A---C
i Alouatta_belzebul.k141_3560514                         C 0 I 3
s Alouatta_caraya.k141_1701091                                1276 6 -     36483 TC--CG--A---C
i Alouatta_caraya.k141_1701091                           C 0 I 3
s Alouatta_discolor.k141_566626                              11725 6 +     28687 TC--CG--A---C
i Alouatta_discolor.k141_566626                          C 0 I 3
s Alouatta_juara.k141_1302312                                  241 6 +     27940 TC--CG--A---C
i Alouatta_juara.k141_1302312                            C 0 I 3
s Alouatta_macconnelli.k141_918386                            1285 6 -      9457 TC--CG--A---C
i Alouatta_macconnelli.k141_918386                       C 0 I 3
s Alouatta_nigerrima.k141_1929159                              241 6 +     30492 TC--CG--A---C
i Alouatta_nigerrima.k141_1929159                        C 0 I 3
s Alouatta_palliata.k141_2135620                              4236 6 +     47717 TC--CG--A---C
i Alouatta_palliata.k141_2135620                         C 0 I 3
s Alouatta_puruensis.k141_362188                               968 6 +      5663 TC--CG--A---C
i Alouatta_puruensis.k141_362188                         C 0 I 3
s Alouatta_seniculus.k141_117119                             15420 6 +     50774 TC--CG--A---C
i Alouatta_seniculus.k141_117119                         C 0 I 3
s Anoura_caudifer.AnoCau_scaffold_1412                      185908 6 +    412891 CT--CT--G---C
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  16167 6 -     33861 TC--CG--A---C
i Aotus_azarae.k141_3104676                              C 0 I 3
s Aotus_griseimembra.k141_2240599                            16213 6 -     34016 TC--CG--A---C
i Aotus_griseimembra.k141_2240599                        C 0 I 3
s Aotus_nancymaae.KZ198451.1                               4298591 6 -   5030052 TC--CG--A---C
i Aotus_nancymaae.KZ198451.1                             C 0 I 3
s Aotus_trivirgatus.k141_2152450                             16200 6 -     34685 TC--CG--A---C
i Aotus_trivirgatus.k141_2152450                         C 0 I 3
s Aotus_vociferans.k141_344750                               29325 6 -     47192 TC--CG--A---C
i Aotus_vociferans.k141_344750                           C 0 I 3
s Aplodontia_rufa.AprRuf_scaffold_68852                      13155 4 +     20879 ----AT--T---T
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 2 C 0
s Arctocebus_calabarensis.k141_2318572                       11997 2 +     14667 --------A---C
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5298 6 +     43469 CC--GT--A---C
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  54240 6 -     92717 CC--CA--A---C
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54871 6 +     85213 CC--CA--A---C
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             6092 6 -     10423 TC--CA--A---C
i Callibella_humilis.k141_1278103                        I 78 I 3
s Callimico_goeldii.k141_1091182                             25483 6 +     31915 TC--CG--A---C
i Callimico_goeldii.k141_1091182                         C 0 I 3
s Callithrix_jacchus.pat_scaffold_3                       23591792 6 - 189096842 tc--ca--a---c
i Callithrix_jacchus.pat_scaffold_3                      I 624 T 309
s Callithrix_kuhlii.k119_1168854                               606 6 -     12329 TC--CA--A---C
i Callithrix_kuhlii.k119_1168854                         I 39 I 3
s CanFam4.chr16                                           17799725 7 -  60362399 CC-CTT--A---T
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                      473 7 -     43241 CC-CTT--A---T
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9035168 7 -   9314153 CC-CTT--A---T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17959644 7 -  59632846 CC-CTT--A---T
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18500941 7 +  63665305 CC-CTT--A---T
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1591 3 -     12242 -----C--A---C
i Capromys_pilorides.CapPil_scaffold_65020               I 2 C 0
s Carlito_syrichta.NW_007259797.1                           156540 2 -    496798 --------A---C
i Carlito_syrichta.NW_007259797.1                        I 2 I 5
s Carollia_perspicillata.CarPer_scaffold_92756                5663 6 -     11696 CC--TT--A---C
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137648 6 +    179628 CC--TT--A---C
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     93625 6 +    217609 gc--cc--t---c
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                         10727 6 -     11392 TC--CA--A---C
i Cebuella_niveiventris.k141_1251222                     I 78 I 3
s Cebuella_pygmaea.k141_1309012                               6794 6 -      7577 TC--CG--A---C
i Cebuella_pygmaea.k141_1309012                          I 78 I 3
s Cebus_albifrons.Contig27                                25653357 6 +  26074798 TC--CG--A---C
i Cebus_albifrons.Contig27                               C 0 I 3
s Cebus_olivaceus.k141_1764483                                1295 6 +     28840 TC--CG--A---C
i Cebus_olivaceus.k141_1764483                           C 0 I 3
s Cebus_unicolor.k141_1837183                                 1020 6 +     14051 TC--CG--A---C
i Cebus_unicolor.k141_1837183                            C 0 I 3
s Cephalopachus_bancanus.k141_1423433                         6038 2 +     31688 --------A---C
i Cephalopachus_bancanus.k141_1423433                    I 2 I 5
s Ceratotherium_simum.JH767749.1                          12232012 1 +  27778364 ------------c
i Ceratotherium_simum.JH767749.1                         I 2 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3039 1 -     25243 ------------c
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 2 C 0
s Cercocebus_atys.KQ010504.1                               4476238 6 +   4669795 CC--CA--A---C
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                         740 6 +     17872 CC--CA--A---C
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           1397 6 -     14043 CC--CA--A---C
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9430 6 +     27781 CC--CA--A---C
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         9598 6 -     20310 CC--CA--A---C
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          12578 6 +     29689 CC--CA--A---C
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7328 6 -     20078 CC--CA--G---C
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          15246 6 -     27936 CC--CA--A---C
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            4116 6 -     17152 CC--CA--A---C
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38817657 6 +  39242232 CC--CA--A---C
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223346 6 -  21565898 CC--CA--G---C
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40465 6 -     53127 CC--CA--G---C
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                         716 6 +     13442 CC--CA--A---C
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15265 6 -     27947 CC--CA--G---C
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         15241 6 +     17596 CC--CA--A---C
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          1288 6 +     14005 CC--CA--A---C
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheirogaleus_major.k141_333249                             21620 6 -     52598 CC--TG--G---C
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16985 6 +     57038 CC--CG--G---C
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1253466 3 +   2543920 -----C--A---C
i Chinchilla_lanigera.JH722012.1                         I 2 C 0
s Chiropotes_albinasus.k141_2206961                           1420 6 -     15524 tc--cg--a---c
i Chiropotes_albinasus.k141_2206961                      I 506 I 3
s Chlorocebus_aethiops.ctg25                              18429225 6 -  18827391 CC--CA--A---C
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15662 6 -     50209 CC--CA--A---C
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422662 6 + 135778131 CC--CA--A---C
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 18870 6 +     19366 CC--TT--A---C
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            173947 6 +    839153 CC--TT--A---C
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14965 6 -     20389 CC--CT--A---A
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 50576 2 +     63868 --------A---C
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11668095 2 + 224834208 --------A---T
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               3523 6 -     19598 CC--TG--A---T
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29050 7 -     87169 CT-CTT--C---C
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837633 6 +   1526836 CG--CC--A---C
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  36462 3 +     51376 -----C--A---C
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 2 C 0
s Daubentonia_madagascariensis.ctg71                      12537826 1 -  12879189 ------------c
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630679 6 +  20541912 CC--TT--A---T
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673861 1 +   1390856 ------------c
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 2 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6612 1 +    198055 ------------c
i Diceros_bicornis.DicBicMic_scaffold_5955               I 2 C 0
s Echinops_telfairi.JH980293.1                            48781157 6 + 111700974 TC--TT--A---T
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.KE759718.1                                  11094 6 +     11740 CT--CT--a---c
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          21046 2 -    110024 --------C---T
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                             950 2 +      8657 --------T---T
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16329862 8 -  41312741 CC-CTT--A-A-C
i Enhydra_lutris.KZ291758.1                              C 0 I 2
s Eptesicus_fuscus.JH977646.1                              2146293 7 -  14770903 ----cacac--ac
i Eptesicus_fuscus.JH977646.1                            I 1 C 0
s Equus_asinus.JREZ01000139.1                              1284120 1 +   4378816 ------------c
i Equus_asinus.JREZ01000139.1                            I 2 C 0
s Equus_caballus.CM000403.2                               18531940 1 -  39960074 ------------c
i Equus_caballus.CM000403.2                              I 2 C 0
s Equus_przewalskii.KK951119.1                               33969 1 +    498745 ------------c
i Equus_przewalskii.KK951119.1                           I 2 C 0
s Erinaceus_europaeus.JH835339.1                           3328802 8 -   7059049 -C--TC--AGATT
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21205830 6 -  21539334 CC--CA--A---C
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_576796                              40665 6 -     44621 CC--CA--A---C
i Eulemur_albifrons.k141_576796                          C 0 C 0
s Eulemur_collaris.k141_377015                                7046 6 -     16928 CC--CA--A---C
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              16078 6 -     25546 CC--CA--A---C
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            13274 6 +     26330 CC--CA--A---C
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14509 6 +     23973 CC--CA--A---C
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                13271 6 +     75513 cc--ca--a---c
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 11201 6 +     97555 cc--ca--a---c
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              692 6 +     13026 CC--CA--A---C
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4745 6 -     17153 CC--CA--A---C
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              14318 6 +    111500 cc--ca--a---c
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237505 7 + 206538554 CC-TTT--C---T
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20196348 7 + 205367284 CC-TTT--C---T
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 10101 7 -     36744 CC-TTT--C---T
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             850992 3 +   3816255 -----c--a---c
i Fukomys_damarensis.KN121974.1                          I 2 C 0
s Galago_moholi.ctg2040                                     427146 2 -    453645 --------A---C
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4836 2 +     11339 --------A---C
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            2134 2 +     41679 --------A---C
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1756 6 -      9135 GC--TT--C---C
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            31925 3 +     49224 -----T--A---T
i Glis_glis.GliGli_scaffold_19807                        I 1 C 0
s Gorilla_beringei.k141_3596273                              16634 6 -     32273 CC--CG--A---C
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186338770 6 + 186649187 CC--CG--A---C
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33169 8 +     78134 TCGCTT--A---T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           7373 6 -     19426 CC--CA--A---C
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12526 6 -     15286 CC--CT--A---C
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             14165 6 +     18253 CC--CT--A---C
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         14266 6 -     41752 CC--CT--A---C
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         14103 6 -     16460 CC--CT--A---C
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242885 7 +    327341 CT-CTT--C---C
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20662749 3 +  22651954 -----C--A---C
i Heterocephalus_glaber.JH602082.1                       I 2 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1447 6 +      7595 CC--TC--A---C
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hoolock_leuconedys.ctg274                                    435430 6 +    630532 CC--TG--A---C
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45585 7 +     55795 CT-CTT--C---C
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83646 4 +    135385 ----CC--A---C
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7521438 4 -   7955117 ----TT--A---C
i Ictidomys_tridecemlineatus.JH393364.1                  I 2 C 0
s Indri_indri.k141_3655594                                   23063 6 +     31101 CC--CA--A---C
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8277363 8 -   9596543 -c--tg--ataat
i Jaculus_jaculus.JH725527.1                             I 7 I 96
s Lasiurus_borealis.LasBor_scaffold_32767                    16937 5 -     42476 ----CT--C-A-C
i Lasiurus_borealis.LasBor_scaffold_32767                I 1 C 0
s Lemur_catta.scaffold_24                                 15524618 6 -  30322482 cc--ca--a---c
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        8293 6 +     64341 TC--TG--A---C
i Leontocebus_fuscicollis.k141_1820339                   C 0 I 3
s Leontocebus_illigeri.k141_1304848                            633 6 -     35062 TC--TG--A---C
i Leontocebus_illigeri.k141_1304848                      C 0 I 3
s Leontocebus_nigricollis.k141_4610752                        8321 6 +     35603 TC--TG--A---C
i Leontocebus_nigricollis.k141_4610752                   C 0 I 3
s Leontopithecus_chrysomelas.k141_1519602                    30003 6 +     38576 tc--cg--a---c
i Leontopithecus_chrysomelas.k141_1519602                I 268 T 265
s Leontopithecus_rosalia.k141_464620                         26717 6 +     66356 tc--cg--a---c
i Leontopithecus_rosalia.k141_464620                     I 282 T 279
s Lepilemur_ankaranensis.k141_596936                         11509 6 -     23766 CC--CA--A---C
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29570 6 +     45836 CC--CA--A---C
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          2108 6 +     25010 CC--CA--A---C
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27506 6 +     54090 CC--CA--A---C
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3043606 7 +   3914936 CC-CTT--A---C
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     7038 6 -     14121 CC--TG--G---C
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437781 6 +   1826925 CC--CA--A---C
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            6394 2 +     11245 --------A---C
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1005215 2 +   6120653 --------A---C
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4217883 6 -  43346337 CC--TT--A---C
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17955884 7 -  59628241 CC-CTT--A---T
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               7596 6 +     40492 CC--CA--A---C
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59676855 6 +  60120075 CC--CA--A---C
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13371 6 -     26193 CC--CA--A---C
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            81155 6 -    114318 CC--CA--A---C
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  6842 6 -     23192 CC--CA--A---C
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16315 6 -     29190 CC--CA--A---C
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  24880 6 +     37952 CC--CA--A---C
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186839969 6 + 187317192 CC--CA--A---C
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458532 6 -  25927173 CC--CA--A---C
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  80728 6 +     89720 CC--CA--A---C
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 7729 6 +     20474 CC--CA--A---C
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   7529 6 -     14993 CC--CA--A---C
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  330395 6 -    668171 CC--CA--A---C
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 5842 6 -     24072 CC--CA--A---C
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26467 6 -     45290 CC--CA--A---C
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91185 6 +     94391 CT--CT--A---C
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23938058 6 -  24302211 CC--CA--A---C
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352181 6 +    752769 CC--CA--A---C
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33103635 4 -  40650429 ----TT--A---T
i Marmota_marmota.CZRN01000018.1                         I 2 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        11000 2 -    207569 CC-----------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10597 8 +     13704 CC-CTT--A-A-C
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 2
s Meriones_unguiculatus.MerUng_scaffold_7390                 33289 2 +    140813 --------A---C
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12182751 2 -  29670104 --------A---T
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                6528 6 -      7380 TC--CG--A---C
i Mico_argentatus.k141_1239457                           I 6 I 3
s Mico_humeralifer.k141_2457295                                757 6 +      1079 TC--CG--A---C
i Mico_humeralifer.k141_2457295                          I 6 I 3
s Mico_schneideri.k141_1950671                                      6540 6 -      7356 TC--CG--A---C
i Mico_schneideri.k141_1950671                                 I 6 I 3
s Microcebus_murinus.CM007674.1                           18292044 6 -  93316391 CC--AA--C---C
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    22859 6 -    145209 CT--TT--A---T
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                16203 6 -     19307 CC--TT--C---C
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11260999 2 -  27267610 --------A---T
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1851173 3 +   8254450 ----ct--t----
i Miniopterus_natalensis.LDJU01000034.1                  I 1 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34848 3 +     64694 ----CT--T----
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 1 C 0
s Miopithecus_ogouensis.k141_534055                           9764 6 -     28506 CC--CA--A---C
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6474 7 -      8324 CC-CTT--A---C
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      9588 6 -     37649 CC--AA--G---C
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142202 3 -    366855 CC--C--------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 2
s Mungos_mungo.MunMun_flattened_line_23663                   35984 7 +     37127 CT-CTT--C---C
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           7391 5 +     14753 ----CT--T-A-C
i Murina_feae.MurFea_scaffold_85699                      I 1 C 0
s Mus_caroli.LT608237.1                                   84361900 2 - 120012414 --------A---T
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87650895 2 - 129401213 --------A---T
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31355552 2 -  89631738 --------A---T
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90752958 2 - 130317789 --------A---T
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              5495 8 +     14296 CCACTT--T---T
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               302011 8 -  14710649 CC-CTT--A-A-C
i Mustela_putorius.JH418006.1                            C 0 I 2
s Myocastor_coypus.MyoCoy_scaffold_10123                     71789 3 -     80779 -----C--G---C
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 2 C 0
s Myotis_brandtii.KE162005.1                                281034 5 -  10118263 ----CT--T-A-C
i Myotis_brandtii.KE162005.1                             I 1 C 0
s Myotis_davidii.KB100139.1                                1588290 5 -   6019432 ----CT--T-A-C
i Myotis_davidii.KB100139.1                              I 1 C 0
s Myotis_lucifugus.GL429869.1                              3904388 3 -   4330536 ----CT--T----
i Myotis_lucifugus.GL429869.1                            I 1 I 1
s Myotis_myotis.MyoMyo_scaffold_281845                         537 5 +      1835 ----CT--T-A-C
i Myotis_myotis.MyoMyo_scaffold_281845                   I 1 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189822 6 +    196477 CT--TT--A---T
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nasalis_larvatus.k141_413338                               15766 6 +     21681 CC--CA--A---C
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308060 7 +  31847680 CC-CTT--A---C
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    758445 6 +    783361 GG--TC--A---C
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149947 7 -   9404916 CC-CTT--A---T
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102586759 2 - 196305487 --------A---C
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              683 2 +      2075 --------A---C
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105762114 2 + 199412804 --------A---C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1364411 6 +   3988456 CC--TC--A---T
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  747519 3 +  11899542 -----c--a---t
i Octodon_degus.JH651603.1                               I 2 C 0
s Odobenus_rosmarus.KB229312.1                              507202 7 -   2017862 CC-CTT--A---C
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   25668 2 +     28053 --------C---T
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 1
s Onychomys_torridus.OnyTor_scaffold_2986                    80678 2 +    102263 --------A---T
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387              10662 6 -     18566 CT--CT--A---C
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147898 6 + 174332312 CC--TG--G---C
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462896 7 -    559221 CC-CTT--A---T
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4666 2 +      8798 --------A---C
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696829 2 -   1103335 --------A---C
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    44722 6 +     80009 CC--CG--A---C
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189143623 6 + 189151597 CC--CG--A---C
i Pan_troglodytes.CM009242.2                             C 0 I 18
s Panthera_onca.PanOnc_flattened_line_3271                  151711 7 +    230217 CC-TTT--C---T
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                264920 7 +  18783137 CC-TTT--C---T
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4721799 7 -   8748460 CC-TTT--C---T
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183443858 6 + 183742232 CC--CA--A---C
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7504 6 +     20448 CC--CA--A---C
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20564316 6 +  20919399 CC--CA--A---C
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6248 6 +     41871 CC--CA--A---C
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     9541 6 +     27711 CC--CA--A---C
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                   538 6 -     11374 CC--CA--A---C
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13209 7 -     78924 GT-CTT--C---C
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10653 2 +     13100 --------A---C
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             9047 2 +     25941 --------A---C
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18195303 2 -  18517816 --------A---T
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Piliocolobus_badius.k141_1234363                           44257 6 +     62158 CC--CA--A---C
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        39004 6 +     89929 CC--CA--A---C
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40420 6 +     51399 CC--CA--A---C
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296658 6 -  14605196 CC--CA--A---C
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2326 5 +     22620 ----CT--T-A-C
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 4 C 0
s Pongo_abelii.CM009266.2                                189131761 6 + 189387572 CC--CG--A---C
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9571368 6 +   9816681 CC--CG--A---C
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               73942 5 -     81375 C---CA--A---C
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              5762 6 +     19060 CC--CA--A---C
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 13902 6 -     22811 CC--TC--A---C
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2597298 6 -   4620579 CC--CA--A---C
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     991284 6 +   2598838 CC--CA--A---C
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29596 6 +     38485 CC--CA--A---C
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1638 6 -     13098 CC--CA--A---C
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          27117 6 +     35766 CC--TA--A---C
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           5304 6 -     24134 CC--TA--A---C
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        29129 6 -     67325 CC--CA--A---C
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           5352 6 -      6182 CC--CA--A---C
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            10935 2 -     21651 --------A---C
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            15694 6 -     21811 CC--TG--A---C
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40791 8 +     42204 CC-CTT--A-A-C
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 2
s Pteropus_alecto.KB030862.1                              22977334 6 +  28871421 TT--CT--A---C
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                7387 6 -      8028 TT--CT--A---C
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20274870 7 -  38429054 TC-TTT--C---T
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15748 6 -     91421 CC--CA--A---C
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7609868 6 +   7812017 CC--CA--A---C
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             15747 6 -     72585 CC--CA--A---C
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53571150 2 +  90668790 --------A---C
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             7458 6 -     11128 CG--CA--A---C
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236807 6 - 195417433 CG--CA--A---C
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672463 6 +   7961872 CG--CA--A---C
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88375 6 -     96226 CT--CT--A---C
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_8081                                  1373 6 +     42994 tc--ca--a---c
i Saguinus_bicolor.k141_8081                             I 464 I 3
s Saguinus_labiatus.k141_285685                               8511 4 +      8564 ----tt--a---a
i Saguinus_labiatus.k141_285685                          C 0 C 0
s Saguinus_midas.LG03                                    209470751 3 + 209938924 -----a--a---c
i Saguinus_midas.LG03                                    I 491 I 3
s Saguinus_imperator.k141_57697                                694 2 +      1030 TC-----------
i Saguinus_imperator.k141_57697                          C 0 I 215
s Saguinus_inustus.k141_3945547                                773 2 -      8737 TC-----------
i Saguinus_inustus.k141_3945547                          C 0 I 49
s Saimiri_boliviensis.NW_024100920.1                     119951605 6 - 121099817 TC--CC--A---C
i Saimiri_boliviensis.NW_024100920.1                     C 0 I 2
s Saimiri_cassiquiarensis.k141_2188234                       23947 6 +     46362 TC--CC--A---C
i Saimiri_cassiquiarensis.k141_2188234                   C 0 I 2
s Saimiri_macrodon.k141_716185                               24042 6 +     45824 TC--CC--A---C
i Saimiri_macrodon.k141_716185                           C 0 I 2
s Saimiri_oerstedii.k141_1487881                             40721 6 -     64574 TC--CC--A---C
i Saimiri_oerstedii.k141_1487881                         C 0 I 2
s Saimiri_sciureus.k141_2278166                               3794 6 -     23631 TC--CC--A---C
i Saimiri_sciureus.k141_2278166                          C 0 I 2
s Saimiri_ustus.k141_1484609                                 23938 6 -     61129 TC--CC--A---C
i Saimiri_ustus.k141_1484609                             C 0 I 2
s Sapajus_apella.ctg103                                    5421311 6 -   5703754 TC--CG--A---C
i Sapajus_apella.ctg103                                  C 0 I 3
s Sapajus_macrocephalus.k141_351809                          56552 6 -     80660 TC--CG--A---C
i Sapajus_macrocephalus.k141_351809                      C 0 I 3
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153743 6 -    313613 CC--TC--A---C
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                          639 6 -     12572 CC--CA--A---C
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27489 6 +     39453 CC--CA--A---C
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            8007 6 +     27826 CC--CA--A---C
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             7529 6 -     19483 CC--CA--A---C
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                       830 6 -     12762 CC--CA--A---C
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                            691 6 +     13763 CC--CA--A---C
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                      831 2 -     30804 --------A---T
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               4311 6 +   1910179 TC--TA--T---C
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13651558 6 -  18376816 CC--TG--G---C
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1954491 4 -   3870691 ----TT--A---C
i Spermophilus_dauricus.KZ294078.1                       I 2 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             31282 7 +     97271 CC-CTT--A---C
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 2
s Suricata_suricatta.SurSur_flattened_line_6629              18888 7 -    196729 CT-CTT--C---C
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 5
s Sus_scrofa.CM000828.4                                    6811372 6 +  69701581 GC--CC--T---C
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                11375 2 +     41958 CC-----------
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 4 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73181 6 +    116680 CC--TT--G---T
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      119340 1 -    156842 ------------c
i Tapirus_indicus.TapInd_scaffold_9301                   I 2 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387796 1 +    539355 ------------c
i Tapirus_terrestris.TapTer_scaffold_755                 I 2 C 0
s Tarsius_lariang.k141_2201908                               27033 2 +     70052 --------A---C
i Tarsius_lariang.k141_2201908                           I 2 I 5
s Tarsius_wallacei.k141_254427                                1830 2 -     16117 --------A---C
i Tarsius_wallacei.k141_254427                           I 2 I 5
s Theropithecus_gelada.CM009954.1                        186429176 6 + 186847797 CC--CA--A---C
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81754 6 +    610378 CC--TT--A---C
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         11580 6 -     20410 CC--CA--A---C
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                       694 6 -     12674 CC--CA--A---C
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       11681 6 +     19930 CC--CA--A---C
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       8092 6 -     19997 CC--CA--A---C
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48231 6 -     60166 CC--CA--A---C
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        15703 6 -     27529 CC--CA--A---C
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     15647 6 -     18194 CC--CA--A---C
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9359 6 -     21137 CC--CA--A---C
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    8062 6 -     10723 CC--CA--A---C
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7234 6 +      9834 CC--CA--A---C
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        25547 6 +     32220 CC--CA--A---C
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5939649 6 +   6242583 CC--CA--A---C
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        8900 6 +     20839 CC--CA--A---C
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4293804 4 +  10818551 ----TT--A---C
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   53854 6 -     77625 CC--TC--A---C
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4850996 7 -   5085361 CC-CTT--A---C
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  11963 6 +     50397 CC--CA--A---C
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             12022 6 +     24756 CC--CA--A---C
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 11347 7 -     43706 CC-CTT--A---T
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          1612 4 +    224448 ----TT--A---T
i Xerus_inauris.XerIna_scaffold_2302                     I 2 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      15455 5 +     63895 -C--TG--A---T
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 7 I 4
e Saguinus_mystax.k141_374627                                 8882 216 -      9399 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vicugna_pacos.KN270157.1                                 5372411 6 -   5488506 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                     9813 0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2156370 0 +   4065304 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   6945 0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              105976 1 +    114563 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     28672 0 -     29689 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Nannospalax_galili.KL204047.1                            2034614 3 -   3037898 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50964 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18978 0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Elephantulus_edwardii.JH947257.1                         1098318 0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    36949 0 +     67921 C
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            64076 0 +   2246927 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Condylura_cristata.JH655891.1                           17548630 0 -  53390261 C
e Colobus_polykomos.k141_906115                              37708 0 +     84244 C
e Colobus_guereza.LG01                                   199949426 0 + 200372422 C
e Colobus_angolensis.KN981557.1                            1911174 0 +   2368649 C
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1053 0 -      8501 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Camelus_ferus.KB017975.1                                  403651 6 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2335354 6 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10002878 6 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       7385 19 +     62944 AC-CCT-C---CTT----GCGGTTCACC
s Acinonyx_jubatus.LLWD01001279.1                           827870 19 -   1699592 AC-CTT-C---ACC----ACACTTCACC
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     71344 19 +     87051 TT-TAA-A---TTT----ACAACTTCCC
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511142 19 -  29979442 AC-CTT-C---ATC----ACACTTCACC
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     75063  2 -     89534 --------------------------GC
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   15313 19 -     52922 AC-TCT-C---CTT----GCAGTTCCCC
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15229 19 -     28001 AC-CCT-C---CTT----GCAGTTCACC
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          5727 19 -     18505 AC-CCT-C---CTT----GCAGTTCACC
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           6579 19 -     12518 AC-CCT-C---CTT----GCAGTTCACC
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              8176  6 +     51355 ----------------------TTCACC
i Alouatta_belzebul.k141_3560514                         I 3 C 0
s Alouatta_caraya.k141_1701091                                1285  6 -     36483 ----------------------TTCACC
i Alouatta_caraya.k141_1701091                           I 3 C 0
s Alouatta_discolor.k141_566626                              11734  6 +     28687 ----------------------TTCACC
i Alouatta_discolor.k141_566626                          I 3 C 0
s Alouatta_juara.k141_1302312                                  250  6 +     27940 ----------------------TTCACC
i Alouatta_juara.k141_1302312                            I 3 C 0
s Alouatta_macconnelli.k141_918386                            1294  6 -      9457 ----------------------TTCACC
i Alouatta_macconnelli.k141_918386                       I 3 C 0
s Alouatta_nigerrima.k141_1929159                              250  6 +     30492 ----------------------TTCACC
i Alouatta_nigerrima.k141_1929159                        I 3 C 0
s Alouatta_palliata.k141_2135620                              4245  6 +     47717 ----------------------TTCACC
i Alouatta_palliata.k141_2135620                         I 3 C 0
s Alouatta_puruensis.k141_362188                               977  6 +      5663 ----------------------TTCACC
i Alouatta_puruensis.k141_362188                         I 3 C 0
s Alouatta_seniculus.k141_117119                             15429  6 +     50774 ----------------------TTCACC
i Alouatta_seniculus.k141_117119                         I 3 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185914 19 +    412891 AC-CTC-C---ATC----CTGCTTCAGC
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  16176  6 -     33861 ----------------------TTCACC
i Aotus_azarae.k141_3104676                              I 3 C 0
s Aotus_griseimembra.k141_2240599                            16222  6 -     34016 ----------------------TTCACC
i Aotus_griseimembra.k141_2240599                        I 3 C 0
s Aotus_nancymaae.KZ198451.1                               4298600  6 -   5030052 ----------------------TTCACC
i Aotus_nancymaae.KZ198451.1                             I 3 C 0
s Aotus_trivirgatus.k141_2152450                             16209  6 -     34685 ----------------------TTCACC
i Aotus_trivirgatus.k141_2152450                         I 3 C 0
s Aotus_vociferans.k141_344750                               29334  6 -     47192 ----------------------TTCACC
i Aotus_vociferans.k141_344750                           I 3 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13159 19 +     20879 AC-CCT-C---ACC----ATGATTCACC
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       11999 19 +     14667 AT-GTT-A---GTC----ACAGGTCACC
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5304 19 +     43469 AC-CTC-C---GTC----CTGCTTGGGC
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  54246 19 -     92717 AC-CTT-C---GTC----ACAGTTCACC
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54877 19 +     85213 AC-CTT-C---GTC----ACAGTTCACC
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             6101  6 -     10423 ----------------------TTCGCC
i Callibella_humilis.k141_1278103                        I 3 C 0
s Callimico_goeldii.k141_1091182                             25492  6 +     31915 ----------------------TTCACC
i Callimico_goeldii.k141_1091182                         I 3 C 0
s Callithrix_jacchus.pat_scaffold_3                       23591489  6 - 189096842 ----------------------ttcgcc
i Callithrix_jacchus.pat_scaffold_3                      T 309 I 312
s Callithrix_kuhlii.k119_1168854                               615  6 -     12329 ----------------------TTCGCC
i Callithrix_kuhlii.k119_1168854                         I 3 C 0
s CanFam4.chr16                                           17799732 19 -  60362399 GC-CTT-C---ATC----ACTCTTCACC
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                      480 19 -     43241 GC-CTT-C---ATC----ACTCTTCACC
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9035175 19 -   9314153 GC-CTT-C---ATC----ACTCTTCACC
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17959651 19 -  59632846 GC-CTT-C---ATC----ACTCTTCACC
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18500948 19 +  63665305 GC-CTT-C---ATC----ACTCTTCACC
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1594 18 -     12242 -TTCCA-C---ACC----A-GCCTCTCC
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           156547 13 -    496798 -----------GTC----ACACTGTCCC
i Carlito_syrichta.NW_007259797.1                        I 5 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5669 19 -     11696 AC-CTC-C---ACC----GTGCTTCGGC
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137654 19 +    179628 AG-CTT-C---ACC----ACAGTTCACC
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     93631 19 +    217609 ac-ctt-c---atc----acatttcagc
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                         10736  6 -     11392 ----------------------TTCACC
i Cebuella_niveiventris.k141_1251222                     I 3 C 0
s Cebuella_pygmaea.k141_1309012                               6803  6 -      7577 ----------------------TTCGCC
i Cebuella_pygmaea.k141_1309012                          I 3 C 0
s Cebus_albifrons.Contig27                                25653366  6 +  26074798 ----------------------TTCACC
i Cebus_albifrons.Contig27                               I 3 C 0
s Cebus_olivaceus.k141_1764483                                1304  6 +     28840 ----------------------TTCACC
i Cebus_olivaceus.k141_1764483                           I 3 C 0
s Cebus_unicolor.k141_1837183                                 1029  6 +     14051 ----------------------TTCACC
i Cebus_unicolor.k141_1837183                            I 3 C 0
s Cephalopachus_bancanus.k141_1423433                         6045 13 +     31688 -----------GTC----GCACTGTCCC
i Cephalopachus_bancanus.k141_1423433                    I 5 C 0
s Ceratotherium_simum.JH767749.1                          12232013 19 +  27778364 ag-ctt-t---atc----gcatttcagc
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3040 19 -     25243 ag-ctt-t---atc----gcatttcagc
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4476244 19 +   4669795 AC-TCT-C---CTT----GCAGTTCACC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                         746 19 +     17872 AC-TCT-C---CTT----GCAGTTCACC
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           1403 19 -     14043 AC-TCT-C---CTT----GCAGTTCACC
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9436 19 +     27781 AC-TCT-C---CTT----GCAGTTCACC
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         9604 19 -     20310 AC-TCT-C---CTT----GCAGTTCACC
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          12584 19 +     29689 AC-TCT-C---CTT----GCAGTTCACC
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7334 19 -     20078 AC-CCT-C---CTT----GTGGTTCACC
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          15252 19 -     27936 AC-TCT-C---CTT----GCAGTTCACC
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            4122 19 -     17152 AC-TGT-C---CTT----GCAGTTCACC
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38817663 19 +  39242232 AC-TCT-C---CTT----GCAGTTCACC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223352 19 -  21565898 AC-CCT-C---CTT----GCAGTTCACC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40471 19 -     53127 AC-TCT-C---CTT----GCAGTTCACC
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                         722 19 +     13442 AC-TCT-C---CTT----GCAGTTCACC
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15271 19 -     27947 AC-TCT-C---CTT----GCAGTTCACC
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         15247 19 +     17596 AC-TCT-C---CTT----GCAGTTCACC
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          1294 19 +     14005 AC-TCT-C---CTT----GCAGTTCACC
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1053 19 -      8501 AC-TTT-C---CTC----ACACCTCACC
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             21626 19 -     52598 TC-CTT-C---ATC----ACAGTCCACC
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           16991 19 +     57038 TC-CTT-C---TTC----ACAGTCCACC
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1253469 18 +   2543920 -C-CCA-C---ACC----ACGCCTCACC
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2206961                           1429  6 -     15524 ----------------------ttcacc
i Chiropotes_albinasus.k141_2206961                      I 3 C 0
s Chlorocebus_aethiops.ctg25                              18429231 19 -  18827391 AC-TCT-C---CTT----GCAGTTCACC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15668 19 -     50209 AC-TCT-C---CTT----GCAGTTCACC
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422668 19 + 135778131 AC-TCT-C---CTT----GCAGTTCACC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 18876 19 +     19366 AC-CTT-C---CTC----ACCGCTCACC
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            173953 19 +    839153 AC-CTT-C---CTC----ACCGCTCACC
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          14971 18 -     20389 AC-CTT-C---ATC----ACATTTCAG-
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 14
s Cricetomys_gambianus.CriGam_scaffold_18520                 50578 19 +     63868 TG-TAA-A---TTC----ACGACTACCC
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11668097 19 + 224834208 TG-TAA-A---TTC----ACAACTTCCC
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               3529 18 -     19598 AC-CC-TC---ATC----ACTTTTCT-C
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29057 18 -     87169 AC-CTT-C---ATC----AC-CTTCACC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837639 19 +   1526836 CC-TTA-C---ACC----ACAGCTTGCC
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  36465 18 +     51376 -CCCCA-C---ACC----A-ATCTCTCC
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            64076 18 +   2246927 AC-TGT-C---CTC----ACACCTCGC-
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537827 19 -  12879189 ac-ctc-a---gtc----acggttcacc
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630685 19 +  20541912 AC-CTC-C---ATC----ACGCTTCAGC
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673862 19 +   1390856 ag-ctt-t---atc----acatttcagc
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6613 19 +    198055 ag-ctt-t---atc----gcatttcagc
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36949 17 +     67921 ---CCA-C---ACC----ACACCTCACC
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Echinops_telfairi.JH980293.1                            48781163 19 + 111700974 AC-CTT-C---ATT----ACATTTCAAC
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.KE759718.1                                  11100 16 +     11740 at-ttt-c---atc----aaatttc---
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          21048 19 -    110024 AG-TAA-C---TTT----ACAACTTCCC
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                             952 19 +      8657 AG-TAA-C---TTT----ACAACTTCCC
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16329872 17 -  41312741 -------CTTCATC----ACATTTCACC
i Enhydra_lutris.KZ291758.1                              I 2 C 0
s Eptesicus_fuscus.JH977646.1                              2146300 18 -  14770903 ac-ctc-c---atc----CCT-TTCAAC
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1284121 19 +   4378816 aa-ctt-t---atc----acatttcggc
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18531941 19 -  39960074 aa-ctt-t---atc----acatttcggc
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               33970 19 +    498745 aa-ctt-t---atc----acatttcggc
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3328810 18 -   7059049 AC-CTT-C---ATC-----CATTTCAGT
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21205836 19 -  21539334 AC-CCT-C---CTT----GCAGTTCACC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_576796                              40671 19 -     44621 AC-CTT-C---GTC----ACAGTCCACC
i Eulemur_albifrons.k141_576796                          C 0 C 0
s Eulemur_collaris.k141_377015                                7052 19 -     16928 AC-CTT-C---GTC----ACAGTCCACC
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              16084 19 -     25546 AC-CTT-C---GTC----ACAGTCCACC
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            13280 19 +     26330 AC-CTT-C---GTC----ACAGTCCACC
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14515 19 +     23973 AC-CTT-C---GTC----ACAGTCCACC
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                13277 19 +     75513 ac-ctt-c---gtc----acagtccacc
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 11207 19 +     97555 ac-ctt-c---gtc----acagtccacc
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              698 19 +     13026 AC-CTT-C---GTC----ACAGTCCACc
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4751 19 -     17153 AC-CTT-C---GTC----ACAGTCCACC
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              14324 19 +    111500 ac-ctt-c---gtc----acagtccacc
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237512 19 + 206538554 AC-CTT-C---ACC----ACACTTCACC
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20196355 19 + 205367284 AC-CTT-C---ACC----ACACTTCACC
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 10108 19 -     36744 AC-CTT-C---ACC----ACACTTCACC
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             850995 18 +   3816255 -a-cca-t---acc----acacctcacc
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg2040                                     427148 19 -    453645 AC-CTT-A---GTC----ACAGGTCACC
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4838 19 +     11339 AC-CTT-A---GTC----ACAGGTCACC
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            2136 19 +     41679 AC-CTT-A---GTC----ACAGGTCACC
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1762 18 -      9135 AC-C-T-C---GCC----ACGGCCCACC
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            31928 19 +     49224 AT-CTT-C---ACC----ACAATTCAGC
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              16640 19 -     32273 AC-CCT-C---CTT----GTGGTTCACC
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186338776 19 + 186649187 AC-CCT-C---CTT----GTGGTTCACC
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33177 19 +     78134 AT-CTT-C---ACC----ACAATTCAGC
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           7379 19 -     19426 AC-CTT-C---GTC----ACAGTCCACC
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12532 19 -     15286 AC-CTT-C---GTC----ACAGTCCACC
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             14171 19 +     18253 AC-CTT-C---ATC----ACAGTCCACC
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         14272 19 -     41752 AC-CTT-C---GTC----ACAGTCCACC
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         14109 19 -     16460 AC-CTT-C---GTC----ACAGTCCACC
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242892 19 +    327341 AC-CTT-C---GTC----ACACTTCCCC
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20662752 19 +  22651954 -CCCCA-T---ACT----ACACCTCACC
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1453 18 +      7595 AC-CTC-C---GCC----ACACTCC-AC
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hoolock_leuconedys.ctg274                                    435436 19 +    630532 AC-CCC-C---CTT----GCGGTTCACC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45592 19 +     55795 AT-TTT-C---ATC----ACACTTCACC
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83650 19 +    135385 CC-CCA-T---ACC----ACACCTCACT
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7521442 17 -   7955117 AC--CT-C---ACC----ACAATTCA-C
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   23069 19 +     31101 AC-CTT-C---GTC----ACAGTTTACC
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8277467 13 -   9596543 -----------ttt----tttttttgcc
i Jaculus_jaculus.JH725527.1                             I 96 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    16942 18 -     42476 AC-CCC-C---ATC----CCT-TTCAAC
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15524624 19 -  30322482 ac-ctt-c---gtc----acagtccacc
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        8302  6 +     64341 ----------------------TTCACC
i Leontocebus_fuscicollis.k141_1820339                   I 3 C 0
s Leontocebus_illigeri.k141_1304848                            642  6 -     35062 ----------------------TTCACC
i Leontocebus_illigeri.k141_1304848                      I 3 C 0
s Leontocebus_nigricollis.k141_4610752                        8330  6 +     35603 ----------------------TTCACC
i Leontocebus_nigricollis.k141_4610752                   I 3 C 0
s Leontopithecus_chrysomelas.k141_1519602                    29744  6 +     38576 ----------------------TTCACC
i Leontopithecus_chrysomelas.k141_1519602                T 265 C 0
s Leontopithecus_rosalia.k141_464620                         26444  6 +     66356 ----------------------ttcacc
i Leontopithecus_rosalia.k141_464620                     T 279 C 0
s Lepilemur_ankaranensis.k141_596936                         11515 18 -     23766 G--CTT-C---GTC----ACAGTCCACC
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29576 18 +     45836 G--CTT-C---GTC----ACAGTCCACC
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          2114 18 +     25010 G--CTT-C---GTC----ACAGTCCACC
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27512 18 +     54090 G--CTT-C---GTC----ACAGTCCACC
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3043613 19 +   3914936 AC-CTT-C---ATC----ACACTTCACC
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     7044 19 -     14121 CC-CTT-C---AGC----ACAGTTTACC
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437787 19 +   1826925 AC-TCT-C---CTT----GCAGTTCACC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            6396 19 +     11245 AC-CAT-T---GTC----ATAGATCACC
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1005217 19 +   6120653 AC-CAT-T---GTC----ATAGATCACC
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4217889 19 -  43346337 AC-CTT-C---ATC----ACACTTCAAC
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17955891 19 -  59628241 GC-CTT-C---ATC----ACTCTTCACC
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               7602 19 +     40492 AC-TCC-C---CTT----GCAGTTCACC
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59676861 19 +  60120075 AC-TCC-C---CTT----GCAGTTCACC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13377 19 -     26193 AC-TCC-C---CTT----GCAGTTCACC
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            81161 19 -    114318 AC-TCC-C---CTT----GCAGTTCACC
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  6848 19 -     23192 AC-TCC-C---CTT----GCAGTTCGCC
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16321 19 -     29190 AC-TCC-C---CTT----GCAGTTCACC
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  24886 19 +     37952 AC-TCC-C---CTT----GCAGTTCACC
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186839975 19 + 187317192 AC-TCC-C---CTT----GCAGTTCACC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458538 19 -  25927173 AC-TCC-C---CTT----GCAGTTCACC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  80734 19 +     89720 AC-TCC-C---CTT----GCAGTTCACC
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 7735 19 +     20474 AC-TCC-C---CTC----GCAGTTCATC
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   7535 19 -     14993 AC-TCC-C---CTT----GCAGTTCACC
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  330401 19 -    668171 AC-TCC-C---CTT----GCAGTTCACC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 5848 19 -     24072 AC-TCC-C---CTT----GCAGTTCACC
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26473 19 -     45290 AC-TCC-C---CTT----GCAGTTCACC
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91191 18 +     94391 AT-TTT-C---ATC----Atatttcat-
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23938064 19 -  24302211 AC-TCT-C---CTT----GCAGTTCACC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352187 19 +    752769 AC-TCT-C---CTT----GCAGTTCACC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33103639 17 -  40650429 AC--CT-C---ACC----ACAATTCA-C
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        11002 18 -    207569 AC-CTG-C---AAC----ACATTTCAG-
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 14
s Mellivora_capensis.MelCap_flattened_line_69365             10607 17 +     13704 -------CTTCATC----ACACTTCACC
i Mellivora_capensis.MelCap_flattened_line_69365         I 2 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 33291 19 +    140813 TG-TAA-A---TTT----ATGACTCCCC
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12182753 19 -  29670104 TG-TAA-A---CTC----ACAACTTCCC
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                6537  6 -      7380 ----------------------TTCGCC
i Mico_argentatus.k141_1239457                           I 3 C 0
s Mico_humeralifer.k141_2457295                                766  6 +      1079 ----------------------TTCACC
i Mico_humeralifer.k141_2457295                          I 3 C 0
s Mico_schneideri.k141_1950671                                      6549  6 -      7356 ----------------------TTCGCC
i Mico_schneideri.k141_1950671                                 I 3 C 0
s Microcebus_murinus.CM007674.1                           18292050 19 -  93316391 TC-CCT-C---ATC----ACAGTCCACC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    22865 23 -    145209 AC-CTT-C---ATTCACCACATTTCAAC
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                16209 19 -     19307 AC-CTC-C---ATC----ATGCTTCAGC
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11261001 19 -  27267610 AG-TAA-C---TTT----ACAACTTCCC
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1851176 18 +   8254450 ---ccc-c---agc---acgTTTCCACC
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34851 18 +     64694 ---CCC-C---AGC---GCGTTTCCACC
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 5
s Miopithecus_ogouensis.k141_534055                           9770 19 -     28506 AC-CCT-C---CTT----GCAGTTCACC
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6481 19 -      8324 AC-CTT-C---ATC----ACACTTCACC
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      9594 19 -     37649 TC-CCT-C---ATC----ACAGTCCACC
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142207 19 -    366855 GC-CTC-C---GTC----GCGCTGCAGC
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 2 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   35991 19 +     37127 AC-CTT-C---GTC----ACACTTCTCC
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           7396 18 +     14753 AC-TTC-C---AAC----CCT-TTCAAC
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84361902 21 - 120012414 TG-TAA-G---ATT--TTTTGACTTCTC
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87650897 19 - 129401213 TG-TAA-G---ATT----TTGACTTCCC
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31355554 19 -  89631738 TG-TAA-G---ATT----ATGACTTCCC
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90752960 19 - 130317789 TG-TAA-G---ATT----TTGACTTCCC
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              5503 19 +     14296 AT-CTC-C---ACC----ATACTTCATC
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               302021 17 -  14710649 -------CTTCATA----ACATTTCGCT
i Mustela_putorius.JH418006.1                            I 2 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71792 14 -     80779 -CCCCA-C---AGC----A-GCCT----
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                281039 18 -  10118263 AC-CTC-C---ATC----CCT-TTCAAC
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1588295 18 -   6019432 AC-CTC-C---ATC----CCT-TTCAAC
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3904392 17 -   4330536 -C-CTC-C---ATC----CCT-TTCAAC
i Myotis_lucifugus.GL429869.1                            I 1 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                         542 18 +      1835 AC-CTC-C---ATC----CCT-TTCAAC
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189828 19 +    196477 AC-CCT-C---CTC----TCATCTCACC
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2034617 10 -   3037898 -------------C----ACAA-TGACC
i Nannospalax_galili.KL204047.1                          I 3 C 0
s Nasalis_larvatus.k141_413338                               15772 19 +     21681 AC-CCT-C---CTT----GCAGTTCACC
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308067 19 +  31847680 AC-CTT-C---ATC----ACACTTCACC
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    758451 17 +    783361 A---TC-G---GTC----ATGCTTCAGC
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149954 19 -   9404916 GC-CTT-C---ATC----ACTCTTCACC
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102586761 19 - 196305487 AC-CAT-A---GTC----ATAGGTCACC
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              685 19 +      2075 AC-CAT-A---GTC----ATAGGTCACC
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105762116 19 + 199412804 AC-CAT-A---GTC----ATAGGTCACC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1364417 19 +   3988456 TC-CTT-C---AGT----TCAGTTCACC
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  747522 18 +  11899542 -cCCCA-C---ACC----A-AACTCTCC
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                              507209 19 -   2017862 AC-CTT-C---ATC----ACACTTCACC
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   25671 19 +     28053 AG-TAA-C---TTT----ACAACTCCCC
i Ondatra_zibethicus.OndZib_scaffold_46174               I 1 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    80680 19 +    102263 TG-TAA-A---CTC----ACGACTTCCC
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387              10668 19 -     18566 AC-CTT-C---ATC----ACATTCCATC
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147904 19 + 174332312 CC-CTT-C---AGC----ACAGTTCACC
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462903 19 -    559221 GC-CTT-C---ATC----ACTCTTCACC
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4668 19 +      8798 AC-CTT-A---GTC----ACAGGTCACC
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696831 19 -   1103335 AC-CTT-A---GTC----ACAGGTCACC
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    44728 19 +     80009 AC-CCT-C---CTT----GCGGTTCACC
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.KZ622849.1                                 22931 19 +    110857 AC-CCT-C---CTT----GCGGTTCACC
i Pan_troglodytes.KZ622849.1                             I 230 I 43
s Panthera_onca.PanOnc_flattened_line_3271                  151718 19 +    230217 GC-CTT-C---ACC----ACACTTCACC
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                264927 19 +  18783137 GC-CTT-C---ACC----ACACTTCACC
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4721806 19 -   8748460 GC-CTT-C---ACC----ACACTTCACC
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183443864 19 + 183742232 AC-TCT-C---CTT----GCAGTTCACC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7510 19 +     20448 AC-TCT-C---CTT----GCAGTTCACC
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20564322 19 +  20919399 AC-TCT-C---CTT----GCAGTTCACC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6254 19 +     41871 AC-TCT-C---CTT----GCAGTTCACC
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     9547 19 +     27711 AC-TCT-C---CTT----GCAGTTCACC
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                   544 19 -     11374 AC-TCT-C---CTT----GCAGTTCACC
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13216 18 -     78924 AT-TGT-C---ATT----ACACT-CACC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10655 19 +     13100 AT-GTT-A---GTC----ACAGGTCACC
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             9049 19 +     25941 AT-GTT-A---GTC----ACAGGTCACC
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18195305 19 -  18517816 TG-TAA-A---CTC----ACGACTTCCC
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28672  8 -     29689 -------------------G-CCTCACC
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Piliocolobus_badius.k141_1234363                           44263 19 +     62158 AC-CCT-C---CTT----GCAGTTCACC
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        39010 19 +     89929 AC-CCT-C---CTT----GCAGTTCACC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40426 19 +     51399 AC-CCT-C---CTT----GCAGTTCACC
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296664 19 -  14605196 AC-CCT-C---CTT----GCAGTTCACC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2331 18 +     22620 AC-CTC-C---ATC----CCT-TTCAAC
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189131767 19 + 189387572 AC-CCT-C---CTT----GCGGTTCACC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9571374 19 +   9816681 AC-CCT-C---CTT----GCGGTTCACC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               73947 19 -     81375 AC-CCT-C---CTT----GCAGTTCACC
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              5768 19 +     19060 AC-CCT-C---CTT----GCAGTTCACC
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 13908 18 -     22811 AC-CTC-C---GCC----ACATTCC-AC
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2597304 19 -   4620579 AC-CTT-T---GTC----ACAGTCCACC
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     991290 19 +   2598838 AC-CTT-C---GTC----ACAGTTCACC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29602 19 +     38485 AC-CTT-C---GTC----ACAGTTCACC
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1644 19 -     13098 AC-CTT-C---ATC----ACAGTTCACC
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          27123 19 +     35766 AC-CTT-C---ATC----ACAGTTCACC
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           5310 19 -     24134 AC-CTT-C---ATC----ACAGTTCACC
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        29135 19 -     67325 AC-CTT-C---GTC----ACAGTTCACC
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           5358 19 -      6182 AC-CTT-C---GTC----ACAGTTCACC
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            10937 19 -     21651 TG-TAA-A---TTT----GTGACTCTCC
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            15700 19 -     21811 AC-CTC-C---TTC----TCGCTGCAGC
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40801 17 +     42204 -------CTTCATC----ACATTTCACC
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 2 C 0
s Pteropus_alecto.KB030862.1                              22977340 16 +  28871421 AT-TTT-C---ATC----ACATTTC---
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                7393 16 -      8028 AT-TTT-C---ATC----ACATTTC---
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20274877 19 -  38429054 AC-CTT-C---ACC----ACACTTCACC
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15754 19 -     91421 AC-CCT-C---CTT----GCAGTTCACC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7609874 19 +   7812017 AC-CCT-C---CTT----GCAGTTCACC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             15753 19 -     72585 AC-CCT-C---CTT----GCAGTTCACC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53571152 19 +  90668790 TG-TAA-G---ATT----ATGACTTTCC
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             7464 19 -     11128 AC-CCT-C---CTT----GCAGTTCACC
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236813 19 - 195417433 AC-CCT-C---CTT----GCAGTTCACC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672469 19 +   7961872 AC-CCT-C---CTT----GCAGTTCACC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88381 16 -     96226 GT-TTT-C---ATC----ACATTTC---
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_8081                                  1382  6 +     42994 ----------------------ttcacc
i Saguinus_bicolor.k141_8081                             I 3 C 0
s Saguinus_imperator.k141_57697                                911  1 +      1030 ---------------------------C
i Saguinus_imperator.k141_57697                          I 215 C 0
s Saguinus_inustus.k141_3945547                                824  1 -      8737 ---------------------------C
i Saguinus_inustus.k141_3945547                          I 49 C 0
s Saguinus_midas.LG03                                    209470757  6 + 209938924 ----------------------ttcacc
i Saguinus_midas.LG03                                    I 3 I 4280
s Saguinus_mystax.k141_374627                                 9098  1 -      9399 ---------------------------c
i Saguinus_mystax.k141_374627                            I 216 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951613  6 - 121099817 ----------------------TTCACC
i Saimiri_boliviensis.NW_024100920.1                     I 2 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23955  6 +     46362 ----------------------TTCACC
i Saimiri_cassiquiarensis.k141_2188234                   I 2 C 0
s Saimiri_macrodon.k141_716185                               24050  6 +     45824 ----------------------TTCACC
i Saimiri_macrodon.k141_716185                           I 2 C 0
s Saimiri_oerstedii.k141_1487881                             40729  6 -     64574 ----------------------TTCACC
i Saimiri_oerstedii.k141_1487881                         I 2 C 0
s Saimiri_sciureus.k141_2278166                               3802  6 -     23631 ----------------------TTCACC
i Saimiri_sciureus.k141_2278166                          I 2 C 0
s Saimiri_ustus.k141_1484609                                 23946  6 -     61129 ----------------------TTCACC
i Saimiri_ustus.k141_1484609                             I 2 C 0
s Sapajus_apella.ctg103                                    5421320  6 -   5703754 ----------------------TTCACC
i Sapajus_apella.ctg103                                  I 3 C 0
s Sapajus_macrocephalus.k141_351809                          56561  6 -     80660 ----------------------TTCACC
i Sapajus_macrocephalus.k141_351809                      I 3 C 0
s Saguinus_labiatus.k141_285685                               8515  3 +      8564 ac-t------------------------
i Saguinus_labiatus.k141_285685                          C 0 N 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153749 19 -    313613 AC-CCT-C---ATC----ACATTTCAGT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                          645 19 -     12572 AC-CCT-C---CTT----GCAGTTCACC
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27495 19 +     39453 AC-CCT-T---CTT----GCAGTTCACC
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            8013 19 +     27826 AC-CCT-C---CTT----GCAGTTCACC
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             7535 19 -     19483 AC-CCT-C---CTT----GCAGTTCACC
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                       836 19 -     12762 AC-CCT-C---CTT----GCAGTTCACC
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                            697 19 +     13763 AC-CCT-C---CTT----GCAGTTCACC
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                      833 19 -     30804 TT-TAA-A---TTC----ACGATTTTCC
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               4317 18 +   1910179 AC-CC--A---AGC----ACAACTCAGC
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13651564 19 -  18376816 AC-CT-TC---ATC----ACTTTTATCC
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1954495 17 -   3870691 AC--CT-C---ACC----ACAATTCA-C
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             31291 14 +     97271 -------C---GTC----ACACTTTACC
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 2 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              18900 13 -    196729 -----------GTC----ACACTTCTCC
i Suricata_suricatta.SurSur_flattened_line_6629          I 5 C 0
s Sus_scrofa.CM000828.4                                    6811378 19 +  69701581 AC-CTT-C---ATC----ACATTTCAGC
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                11377 17 +     41958 ---CTC-C---ACC----CTGGTCCACC
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73187 19 +    116680 AC-CCT-C---CTC----TCATCTCACC
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      119341 19 -    156842 aa-ctt-c---atc----acatttcagc
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387797 19 +    539355 aa-ctt-c---atc----acatttcagc
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               27040 13 +     70052 -----------GTC----GCACTGTCCC
i Tarsius_lariang.k141_2201908                           I 5 C 0
s Tarsius_wallacei.k141_254427                                1837 13 -     16117 -----------GTC----GCACTGTCCC
i Tarsius_wallacei.k141_254427                           I 5 C 0
s Theropithecus_gelada.CM009954.1                        186429182 19 + 186847797 AC-TCT-C---CTT----GCAGTTCACC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105977  8 +    114563 --------------------ACCTCACC
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 1 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   6945 19 +      8208 AC-TCC-C---CTC----ACGCCTCACC
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81760 23 +    610378 GC-CTC-C---ATCAATCAAGCTTCAGC
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         11586 19 -     20410 AC-CCT-C---CTT----GCAGTTCACC
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                       700 19 -     12674 AC-CCT-C---CTT----GCAGCTCACC
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       11687 19 +     19930 AC-CCT-C---CTT----GCAGTTCACC
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       8098 19 -     19997 AC-CCT-C---CTT----GCAGCTCACC
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48237 19 -     60166 AC-CCT-C---CTT----GCAGTTCACC
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        15709 19 -     27529 AC-CCT-C---CTT----GCAGTTCACC
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     15653 19 -     18194 AC-CCT-C---CTT----GCAGTTCACC
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9365 19 -     21137 AC-CCT-C---CTT----GCAGTTCACC
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    8068 19 -     10723 AC-CCT-C---CTT----GCAGTTCACC
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7240 19 +      9834 AC-CCT-C---CTT----GCAGCTCACC
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        25553 19 +     32220 AC-CCT-C---CTT----GCAGTTCACC
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5939655 19 +   6242583 AC-CCT-C---CTT----GCAGCTCACC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        8906 19 +     20839 AC-CCT-C---CTT----GCAGTTCACC
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4293808 19 +  10818551 CC-CTT-C---ATC----ACATCTCAAC
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2156370 10 +   4065304 ------------------AGTGGTCAAC
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9813 10 -     10553 ------------------AGTGGTCAGC
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   53860 19 -     77625 AC-CCT-C---ATC----ACATTTCAGC
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4851003 18 -   5085361 AC-CTT-C---ATC----ACACTTC-CC
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  11969 19 +     50397 AC-CTT-C---ATC----ACTGTCCACC
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             12028 19 +     24756 AC-CTT-C---GTC----ACTGTCCACC
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 11354 19 -     43706 GC-CTT-C---ATC----ACTCTTCACC
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          1616 17 +    224448 AC--CT-C---ACC----ACAATTCA-C
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      15464 13 +     63895 -----------TCC----TCAGTTTGCC
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 4 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vicugna_pacos.KN270157.1                                 5372411  6 -   5488506 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50964  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18978  0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Elephantulus_edwardii.JH947257.1                         1098318  0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Condylura_cristata.JH655891.1                           17548630  0 -  53390261 C
e Colobus_polykomos.k141_906115                              37708  0 +     84244 C
e Colobus_guereza.LG01                                   199949426  0 + 200372422 C
e Colobus_angolensis.KN981557.1                            1911174  0 +   2368649 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Camelus_ferus.KB017975.1                                  403651  6 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2335354  6 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10002878  6 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C
e Ailurus_fulgens.LNAC01001112.1                             79912  0 -    347723 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       7404 2 +     62944 C-A
s Acinonyx_jubatus.LLWD01001279.1                           827889 2 -   1699592 C-A
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     71363 2 +     87051 C-G
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511161 2 -  29979442 C-A
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     75065 2 -     89534 C-A
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   15332 2 -     52922 C-A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15248 2 -     28001 C-A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          5746 2 -     18505 C-A
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           6598 2 -     12518 C-A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              8182 2 +     51355 C-A
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                1291 2 -     36483 C-A
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              11740 2 +     28687 C-A
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                  256 2 +     27940 C-A
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            1300 2 -      9457 C-A
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                              256 2 +     30492 C-A
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              4251 2 +     47717 C-A
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                               983 2 +      5663 C-A
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             15435 2 +     50774 C-A
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185933 2 +    412891 C-A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  16182 2 -     33861 C-A
i Aotus_azarae.k141_3104676                              C 0 I 236
s Aotus_griseimembra.k141_2240599                            16228 2 -     34016 C-A
i Aotus_griseimembra.k141_2240599                        C 0 I 187
s Aotus_nancymaae.KZ198451.1                               4298606 2 -   5030052 C-A
i Aotus_nancymaae.KZ198451.1                             C 0 I 236
s Aotus_trivirgatus.k141_2152450                             16215 2 -     34685 C-A
i Aotus_trivirgatus.k141_2152450                         C 0 I 236
s Aotus_vociferans.k141_344750                               29340 2 -     47192 C-A
i Aotus_vociferans.k141_344750                           C 0 I 236
s Aplodontia_rufa.AprRuf_scaffold_68852                      13178 2 +     20879 C-A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       12018 1 +     14667 --A
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5323 2 +     43469 C-C
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  54265 2 -     92717 C-A
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54896 2 +     85213 C-A
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             6107 2 -     10423 C-A
i Callibella_humilis.k141_1278103                        C 0 I 195
s Callimico_goeldii.k141_1091182                             25498 2 +     31915 C-A
i Callimico_goeldii.k141_1091182                         C 0 I 195
s Callithrix_jacchus.pat_scaffold_3                       23591807 2 - 189096842 c-a
i Callithrix_jacchus.pat_scaffold_3                      I 312 I 195
s Callithrix_kuhlii.k119_1168854                               621 2 -     12329 C-A
i Callithrix_kuhlii.k119_1168854                         C 0 I 195
s CanFam4.chr16                                           17799751 2 -  60362399 C-A
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                      499 2 -     43241 C-A
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9035194 2 -   9314153 C-A
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17959670 2 -  59632846 C-A
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18500967 2 +  63665305 C-A
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1612 2 -     12242 C-A
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           156560 2 -    496798 C-A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5688 2 -     11696 C-A
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137673 2 +    179628 C-A
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     93650 2 +    217609 t-g
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                         10742 2 -     11392 C-A
i Cebuella_niveiventris.k141_1251222                     C 0 I 16
s Cebuella_pygmaea.k141_1309012                               6809 2 -      7577 C-A
i Cebuella_pygmaea.k141_1309012                          C 0 I 131
s Cebus_albifrons.Contig27                                25653372 2 +  26074798 C-A
i Cebus_albifrons.Contig27                               C 0 I 12
s Cebus_olivaceus.k141_1764483                                1310 2 +     28840 C-A
i Cebus_olivaceus.k141_1764483                           C 0 I 12
s Cebus_unicolor.k141_1837183                                 1035 2 +     14051 C-A
i Cebus_unicolor.k141_1837183                            C 0 I 12
s Cephalopachus_bancanus.k141_1423433                         6058 2 +     31688 C-A
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12232032 2 +  27778364 c-a
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3059 2 -     25243 c-a
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4476263 2 +   4669795 C-A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                         765 2 +     17872 C-A
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           1422 2 -     14043 C-A
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9455 2 +     27781 C-A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         9623 2 -     20310 C-A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          12603 2 +     29689 C-A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7353 2 -     20078 C-A
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          15271 2 -     27936 C-A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            4141 2 -     17152 C-A
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38817682 2 +  39242232 C-A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223371 2 -  21565898 C-A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40490 2 -     53127 C-A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                         741 2 +     13442 C-A
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15290 2 -     27947 C-A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         15266 2 +     17596 C-A
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          1313 2 +     14005 C-A
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1072 2 -      8501 C-A
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             21645 2 -     52598 C-A
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           17010 2 +     57038 C-A
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1253487 2 +   2543920 C-A
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2206961                           1435 2 -     15524 c-a
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18429250 2 -  18827391 C-A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15687 2 -     50209 C-A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422687 2 + 135778131 C-A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 18895 2 +     19366 C-A
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 I 13
s Choloepus_hoffmanni.KN194906.1                            173972 2 +    839153 C-A
i Choloepus_hoffmanni.KN194906.1                         C 0 I 13
s Cricetomys_gambianus.CriGam_scaffold_18520                 50597 2 +     63868 C-A
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11668116 2 + 224834208 C-A
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               3547 2 -     19598 C-A
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 I 18
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29075 2 -     87169 C-A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837658 2 +   1526836 C-A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  36483 2 +     51376 C-A
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            64094 2 +   2246927 A-A
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537846 2 -  12879189 c-a
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630704 2 +  20541912 C-A
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673881 2 +   1390856 c-a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6632 2 +    198055 c-a
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36966 2 +     67921 C-A
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Echinops_telfairi.JH980293.1                            48781182 2 + 111700974 C-A
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          21067 2 -    110024 C-A
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                             971 2 +      8657 C-A
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16329889 2 -  41312741 C-A
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2146318 2 -  14770903 C-A
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1284140 2 +   4378816 c-a
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18531960 2 -  39960074 c-a
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               33989 2 +    498745 c-a
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3328828 2 -   7059049 C-A
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21205855 2 -  21539334 C-A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_576796                              40690 2 -     44621 C-A
i Eulemur_albifrons.k141_576796                          C 0 C 0
s Eulemur_collaris.k141_377015                                7071 2 -     16928 C-A
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              16103 2 -     25546 C-A
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            13299 2 +     26330 C-A
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14534 2 +     23973 C-A
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                13296 2 +     75513 c-a
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 11226 2 +     97555 c-a
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              717 2 +     13026 c-t
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4770 2 -     17153 C-A
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              14343 2 +    111500 c-a
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237531 2 + 206538554 C-A
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20196374 2 + 205367284 C-A
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 10127 2 -     36744 C-A
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             851013 2 +   3816255 C-A
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg2040                                     427167 1 -    453645 --A
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4857 1 +     11339 --A
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            2155 1 +     41679 --A
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1780 2 -      9135 C-A
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            31947 2 +     49224 C-A
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              16659 2 -     32273 C-A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186338795 2 + 186649187 C-A
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33196 2 +     78134 C-A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           7398 2 -     19426 C-A
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12551 2 -     15286 C-A
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             14190 2 +     18253 C-A
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         14291 2 -     41752 C-A
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         14128 2 -     16460 C-A
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242911 2 +    327341 G-A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20662771 2 +  22651954 C-A
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1471 2 +      7595 C-A
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hoolock_leuconedys.ctg274                                    435455 2 +    630532 C-A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45611 2 +     55795 C-A
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83669 2 +    135385 C-A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7521459 2 -   7955117 C-A
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   23088 2 +     31101 C-A
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8277480 2 -   9596543 t-a
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    16960 2 -     42476 C-A
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 6
s Lemur_catta.scaffold_24                                 15524643 2 -  30322482 c-a
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        8308 2 +     64341 C-A
i Leontocebus_fuscicollis.k141_1820339                   C 0 I 194
s Leontocebus_illigeri.k141_1304848                            648 2 -     35062 C-A
i Leontocebus_illigeri.k141_1304848                      C 0 I 194
s Leontocebus_nigricollis.k141_4610752                        8336 2 +     35603 C-A
i Leontocebus_nigricollis.k141_4610752                   C 0 I 193
s Leontopithecus_chrysomelas.k141_1519602                    29750 2 +     38576 C-A
i Leontopithecus_chrysomelas.k141_1519602                C 0 I 470
s Leontopithecus_rosalia.k141_464620                         26450 2 +     66356 c-a
i Leontopithecus_rosalia.k141_464620                     C 0 I 474
s Lepilemur_ankaranensis.k141_596936                         11533 2 -     23766 C-A
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29594 2 +     45836 C-A
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          2132 2 +     25010 C-A
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27530 2 +     54090 C-A
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3043632 2 +   3914936 C-A
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     7063 2 -     14121 C-A
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437806 2 +   1826925 C-A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            6415 1 +     11245 --A
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1005236 1 +   6120653 --A
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4217908 2 -  43346337 C-A
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17955910 2 -  59628241 C-A
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               7621 2 +     40492 C-A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59676880 2 +  60120075 C-A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13396 2 -     26193 C-A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            81180 2 -    114318 C-A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  6867 2 -     23192 C-A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16340 2 -     29190 C-A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  24905 2 +     37952 C-A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186839994 2 + 187317192 C-A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458557 2 -  25927173 C-A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  80753 2 +     89720 C-A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 7754 2 +     20474 C-A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   7554 2 -     14993 C-A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  330420 2 -    668171 C-A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 5867 2 -     24072 C-A
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26492 2 -     45290 C-A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23938083 2 -  24302211 C-A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352206 2 +    752769 C-A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33103656 2 -  40650429 C-A
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10624 2 +     13704 C-A
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 33310 2 +    140813 C-A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12182772 2 -  29670104 C-A
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                6543 2 -      7380 C-A
i Mico_argentatus.k141_1239457                           C 0 I 195
s Mico_humeralifer.k141_2457295                                772 2 +      1079 C-A
i Mico_humeralifer.k141_2457295                          C 0 I 158
s Mico_schneideri.k141_1950671                                      6555 2 -      7356 C-A
i Mico_schneideri.k141_1950671                                 C 0 I 156
s Microcebus_murinus.CM007674.1                           18292069 2 -  93316391 C-A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    22888 2 -    145209 C-A
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                16228 2 -     19307 C-C
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11261020 2 -  27267610 C-A
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1851194 2 +   8254450 A-A
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 4
s Miniopterus_schreibersii.MinSch_scaffold_18080             34874 2 +     64694 A-A
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 5 I 4
s Miopithecus_ogouensis.k141_534055                           9789 2 -     28506 C-A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6500 2 -      8324 C-A
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      9613 2 -     37649 C-A
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142226 2 -    366855 C-A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   36010 2 +     37127 C-A
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           7414 2 +     14753 C-A
i Murina_feae.MurFea_scaffold_85699                      C 0 I 6
s Mus_caroli.LT608237.1                                   84361923 2 - 120012414 C-A
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87650916 2 - 129401213 C-A
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31355573 2 -  89631738 C-A
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90752979 2 - 130317789 C-A
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              5522 2 +     14296 C-A
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               302038 2 -  14710649 C-A
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                281057 2 -  10118263 C-A
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1588313 2 -   6019432 C-A
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3904409 2 -   4330536 C-A
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                         560 2 +      1835 C-A
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189847 2 +    196477 C-A
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2034627 2 -   3037898 C-A
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               15791 2 +     21681 C-A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308086 2 +  31847680 C-A
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    758468 2 +    783361 C-A
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149973 2 -   9404916 C-A
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102586780 1 - 196305487 --A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              704 1 +      2075 --A
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105762135 1 + 199412804 --A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1364436 2 +   3988456 T-A
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  747540 2 +  11899542 C-A
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                              507228 2 -   2017862 C-A
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   25690 2 +     28053 C-A
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    80699 2 +    102263 C-A
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387              10687 2 -     18566 T-A
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147923 2 + 174332312 C-A
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462922 2 -    559221 C-A
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4687 1 +      8798 --A
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696850 1 -   1103335 --A
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    44747 2 +     80009 C-A
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189143647 2 + 189151597 C-A
i Pan_troglodytes.CM009242.2                             I 18 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  151737 2 +    230217 G-A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                264946 2 +  18783137 C-A
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4721825 2 -   8748460 C-A
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183443883 2 + 183742232 C-A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7529 2 +     20448 C-A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20564341 2 +  20919399 C-A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6273 2 +     41871 C-A
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     9566 2 +     27711 C-A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                   563 2 -     11374 C-A
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13234 2 -     78924 C-A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10674 1 +     13100 --A
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             9068 1 +     25941 --A
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18195324 2 -  18517816 C-A
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28680 2 -     29689 C-A
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Piliocolobus_badius.k141_1234363                           44282 2 +     62158 C-A
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        39029 2 +     89929 C-A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40445 2 +     51399 C-A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296683 2 -  14605196 C-A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2349 2 +     22620 C-A
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 6
s Pongo_abelii.CM009266.2                                189131786 2 + 189387572 C-A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9571393 2 +   9816681 C-A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               73966 2 -     81375 C-A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              5787 2 +     19060 C-A
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 13926 2 -     22811 C-A
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2597323 2 -   4620579 C-A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     991309 2 +   2598838 C-A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29621 2 +     38485 C-A
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1663 2 -     13098 C-A
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          27142 2 +     35766 C-A
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           5329 2 -     24134 C-A
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        29154 2 -     67325 C-A
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           5377 2 -      6182 C-A
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            10956 2 -     21651 C-A
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            15719 2 -     21811 C-A
i Pteronotus_parnellii.KE909381.1                        C 0 I 16
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40818 2 +     42204 C-A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Puma_concolor.QAVW01001104.1                            20274896 2 -  38429054 C-A
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15773 2 -     91421 C-A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7609893 2 +   7812017 C-A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             15772 2 -     72585 C-A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53571171 2 +  90668790 C-A
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             7483 2 -     11128 C-A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236832 2 - 195417433 C-A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672488 2 +   7961872 C-A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_8081                                  1388 2 +     42994 c-a
i Saguinus_bicolor.k141_8081                             C 0 T 117
s Saguinus_imperator.k141_57697                                912 2 +      1030 C-A
i Saguinus_imperator.k141_57697                          C 0 N 0
s Saguinus_inustus.k141_3945547                                825 2 -      8737 C-A
i Saguinus_inustus.k141_3945547                          C 0 I 192
s Saguinus_labiatus.k141_4004060                               478 3 +      2343 cca
i Saguinus_labiatus.k141_4004060                         N 0 I 192
s Saguinus_midas.LG03                                    209475043 2 + 209938924 c-a
i Saguinus_midas.LG03                                    I 4280 I 194
s Saguinus_mystax.k141_374627                                 9099 1 -      9399 c--
i Saguinus_mystax.k141_374627                            C 0 I 154
s Saimiri_boliviensis.NW_024100920.1                     119951619 2 - 121099817 C-A
i Saimiri_boliviensis.NW_024100920.1                     C 0 I 4
s Saimiri_cassiquiarensis.k141_2188234                       23961 2 +     46362 C-A
i Saimiri_cassiquiarensis.k141_2188234                   C 0 I 4
s Saimiri_macrodon.k141_716185                               24056 2 +     45824 C-A
i Saimiri_macrodon.k141_716185                           C 0 I 4
s Saimiri_oerstedii.k141_1487881                             40735 2 -     64574 C-A
i Saimiri_oerstedii.k141_1487881                         C 0 I 4
s Saimiri_sciureus.k141_2278166                               3808 2 -     23631 C-A
i Saimiri_sciureus.k141_2278166                          C 0 I 4
s Saimiri_ustus.k141_1484609                                 23952 2 -     61129 C-A
i Saimiri_ustus.k141_1484609                             C 0 I 4
s Sapajus_apella.ctg103                                    5421326 2 -   5703754 C-A
i Sapajus_apella.ctg103                                  C 0 I 12
s Sapajus_macrocephalus.k141_351809                          56567 2 -     80660 C-A
i Sapajus_macrocephalus.k141_351809                      C 0 I 12
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153768 2 -    313613 C-A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                          664 2 -     12572 C-A
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27514 2 +     39453 C-A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            8032 2 +     27826 C-A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             7554 2 -     19483 C-A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                       855 2 -     12762 C-A
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                            716 2 +     13763 C-A
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                      852 2 -     30804 C-A
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               4335 2 +   1910179 C-A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13651583 2 -  18376816 C-A
i Sorex_araneus.JH798187.1                               C 0 I 15
s Spermophilus_dauricus.KZ294078.1                         1954512 2 -   3870691 C-A
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             31305 2 +     97271 C-A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              18913 2 -    196729 C-A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6811397 2 +  69701581 T-G
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                11394 2 +     41958 C-A
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 6
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73206 2 +    116680 C-A
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      119360 2 -    156842 c-a
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387816 2 +    539355 c-a
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               27053 2 +     70052 C-A
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1850 2 -     16117 C-A
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186429201 2 + 186847797 C-A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105985 2 +    114563 C-A
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   6964 2 +      8208 C-A
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81783 2 +    610378 C-A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         11605 2 -     20410 C-A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                       719 2 -     12674 C-A
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       11706 2 +     19930 C-A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       8117 2 -     19997 C-A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48256 2 -     60166 C-A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        15728 2 -     27529 C-A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     15672 2 -     18194 T-G
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9384 2 -     21137 C-G
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    8087 2 -     10723 C-A
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7259 2 +      9834 C-A
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        25572 2 +     32220 C-A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5939674 2 +   6242583 C-A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        8925 2 +     20839 C-A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4293827 2 +  10818551 C-G
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2156380 2 +   4065304 T-G
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9823 2 -     10553 T-G
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   53879 2 -     77625 C-A
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4851021 2 -   5085361 C-A
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  11988 2 +     50397 C-A
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             12047 2 +     24756 C-A
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 11373 2 -     43706 C-A
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          1633 2 +    224448 C-A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      15477 2 +     63895 C-A
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vicugna_pacos.KN270157.1                                 5372411 6 -   5488506 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                88397 0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Pteropus_vampyrus.KN534172.1                                7409 0 -      8028 C
e Pteropus_alecto.KB030862.1                              22977356 0 +  28871421 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     71806 0 -     80779 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Megaderma_lyra.MegLyr_scaffold_4542                        11020 14 -    207569 I
e Manis_pentadactyla.KN006162.1                              50964 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18978 0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 91209 0 +     94391 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Elephantulus_edwardii.JH947257.1                         1098318 0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Eidolon_helvum.KE759718.1                                  11116 0 +     11740 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Craseonycteris_thonglongyai.CraTho_scaffold_58438          14989 14 -     20389 I
e Condylura_cristata.JH655891.1                           17548630 0 -  53390261 C
e Colobus_polykomos.k141_906115                              37708 0 +     84244 C
e Colobus_guereza.LG01                                   199949426 0 + 200372422 C
e Colobus_angolensis.KN981557.1                            1911174 0 +   2368649 C
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Camelus_ferus.KB017975.1                                  403651 6 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2335354 6 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10002878 6 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C
e Ailurus_fulgens.LNAC01001112.1                             79912 0 -    347723 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       7406 24 +     62944 GGATAA---T--GC--------CACC-C-ACTC--T--CCT-TT
s Acinonyx_jubatus.LLWD01001279.1                           827891 23 -   1699592 GACCAG-GGC--T----------ACA-A-TG-C--T--CAT-TT
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     71365 22 +     87051 GGCTGA---C--AC--------CATC-C-AATC--C--CAT---
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 1
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511163 24 -  29979442 GACCAGT-GC--T----------GCA-CAAG-C--T--CAT-TT
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             79912  9 -    347723 -----------------------------AA-C--T--CAT-TT
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     75067 22 -     89534 GGCTCA---T--GC--------TACC-C-ACTC--C--AAG---
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 1
s Allenopithecus_nigroviridis.k141_3361533                   15334 24 -     52922 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15250 24 -     28001 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          5748 24 -     18505 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           6600 24 -     12518 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              8184 23 +     51355 GGACGA---G--GC---------ACC-A-TCTC--T--CAT-TT
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                1293 23 -     36483 GGACGA---G--GC---------ACC-A-TCTC--T--CAT-TT
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              11742 23 +     28687 GGACGA---G--GC---------ACC-A-TCTC--T--CAT-TT
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                  258 23 +     27940 GGACGA---G--GC---------ACC-A-TCTC--T--CAT-TT
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            1302 23 -      9457 GGACGA---G--GC---------ACC-A-TCTC--T--CAT-TT
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                              258 23 +     30492 GGACGA---G--GC---------ACC-A-TCTC--T--CAT-TT
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              4253 23 +     47717 GGACCA---G--GC---------ACC-A-TCTC--T--CAT-TT
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                               985 23 +      5663 GGACGA---G--GC---------ACC-A-TCTC--T--CAT-TT
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             15437 23 +     50774 GGACGA---G--GC---------ACC-A-TCTC--T--CAT-TT
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185935 24 +    412891 GACTGA-GGC--C----------ACA-G-CCAC--G--CAC-TT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  16420 23 -     33861 GGACAA---G--GC---------ACC-A-TCTC--T--CAT-TT
i Aotus_azarae.k141_3104676                              I 236 C 0
s Aotus_griseimembra.k141_2240599                            16417 23 -     34016 GGACAA---G--GC---------ACC-G-TCTC--T--CAT-TT
i Aotus_griseimembra.k141_2240599                        I 187 C 0
s Aotus_nancymaae.KZ198451.1                               4298844 23 -   5030052 GGACAA---G--GC---------ACC-A-TCTC--T--CAT-TT
i Aotus_nancymaae.KZ198451.1                             I 236 C 0
s Aotus_trivirgatus.k141_2152450                             16453 23 -     34685 GGACAA---G--GC---------ACC-A-TCTC--T--CAT-TT
i Aotus_trivirgatus.k141_2152450                         I 236 C 0
s Aotus_vociferans.k141_344750                               29578 23 -     47192 GGACAA---G--GC---------ACC-A-TCTC--T--CAT-TT
i Aotus_vociferans.k141_344750                           I 236 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13180 22 +     20879 GGCCAT---T--AC--------GACT-G-TCTC--C--AAT---
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 1
s Arctocebus_calabarensis.k141_2318572                       12019 24 +     14667 GGGCAA---C--AT--------GACC-T-TCTC--T--TGT-TT
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5325 24 +     43469 GACCGA-GGC--T----------GCA-G-CCAC--A--CAC-TC
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  54267 24 -     92717 GGGCAA---T--GC--------CACC-A-TCTC--T--CGT-TT
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54898 24 +     85213 GGGCAA---T--GC--------CACC-A-TCTC--T--CGT-TT
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             6304 23 -     10423 CGACGA---G--GC---------ACT-A-TCTC--T--CAT-TT
i Callibella_humilis.k141_1278103                        I 195 C 0
s Callimico_goeldii.k141_1091182                             25695 23 +     31915 GGACGA---G--GC---------ACC-A-TCTC--T--CAT-CT
i Callimico_goeldii.k141_1091182                         I 195 C 0
s Callithrix_geoffroyi.k119_69176                              143 23 +      5377 GGACAA---G--GC---------ACC-A-TCTC--T--CAT-TT
i Callithrix_geoffroyi.k119_69176                        N 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592004 22 - 189096842 ggacaa---g--gc---------acc-a-tctc--t--cat-t-
i Callithrix_jacchus.pat_scaffold_3                      I 195 I 1
s Callithrix_kuhlii.k119_1168854                               818 23 -     12329 GGATGA---G--GC---------ACC-A-TCTC--T--CAT-TT
i Callithrix_kuhlii.k119_1168854                         I 195 C 0
s CanFam4.chr16                                           17799753 23 -  60362399 GACCTGT-GC--T----------GCA-C-AT-C--T--CAT-TT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                      501 23 -     43241 GACCTGT-GC--T----------GCA-C-AT-C--T--CAT-TT
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9035196 23 -   9314153 GACCTGT-GC--T----------GCA-C-AT-C--T--CAT-TT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17959672 23 -  59632846 GACCTGT-GC--T----------GCA-C-AT-C--T--CAT-TT
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18500969 23 +  63665305 GACCTGT-GC--T----------GCA-C-AT-C--T--CAT-TT
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1614 18 -     12242 GAACAA---T--GC--------TGCC-C-GGGC-----------
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 1
s Carlito_syrichta.NW_007259797.1                           156562 24 -    496798 GGACCG---C--GC--------TTCT-G-TCTC--T--CAT-GA
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5690 24 -     11696 GACCGA-GGC--T----------GCA-G-CCAC--G--CCC-TG
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137675 22 +    179628 GGCTGA---T--AG--------GACC-A-AGTC--T--CAT---
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 1
s Catagonus_wagneri.CatWag_scaffold_2839                     93652 24 +    217609 gacccg-tgc--t----------gta-g-tctc--t--tgt-gt
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                         10760  7 -     11392 --------------------------------C--T--CAT-TT
i Cebuella_niveiventris.k141_1251222                     I 16 C 0
s Cebuella_pygmaea.k141_1309012                               6942  9 -      7577 ------------------------------CTC--T--CAT-TT
i Cebuella_pygmaea.k141_1309012                          I 131 C 0
s Cebus_albifrons.Contig27                                25653386 10 +  26074798 -----------------------------TCTC--T--CAT-TC
i Cebus_albifrons.Contig27                               I 12 C 0
s Cebus_olivaceus.k141_1764483                                1324 10 +     28840 -----------------------------TCTC--T--CAT-TC
i Cebus_olivaceus.k141_1764483                           I 12 C 0
s Cebus_unicolor.k141_1837183                                 1049 10 +     14051 -----------------------------TCTC--T--CAT-TC
i Cebus_unicolor.k141_1837183                            I 12 C 0
s Cephalopachus_bancanus.k141_1423433                         6060 24 +     31688 GGACCG---T--GC--------TTCT-G-TCTC--A--CAT-GA
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12232034 24 +  27778364 gaccaa-tgc--t----------aca-g-tctc--t--cat-tt
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3061 24 -     25243 gaccaa-tgc--t----------aca-g-tctc--t--cat-tt
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4476265 24 +   4669795 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                         767 24 +     17872 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           1424 24 -     14043 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9457 24 +     27781 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         9625 24 -     20310 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          12605 24 +     29689 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7355 24 -     20078 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          15273 24 -     27936 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            4143 24 -     17152 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38817684 24 +  39242232 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223373 24 -  21565898 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40492 24 -     53127 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                         743 24 +     13442 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15292 24 -     27947 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         15268 24 +     17596 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          1315 24 +     14005 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1074 24 -      8501 GGCCTT---G--GC--------TACA-C-TCTC--C--CTC-TT
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             21647 17 -     52598 GGGCAA---T--GC--------CACC-C-TCT------------
i Cheirogaleus_major.k141_333249                         C 0 I 5
s Cheirogaleus_medius.k141_1055463                           17012 24 +     57038 GGGCAA---T--GC--------CACC-C-TCTC--G--CAT-TT
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1253489 18 +   2543920 GAATGA---C--AC--------TGCC-A-GGGC-----------
i Chinchilla_lanigera.JH722012.1                         C 0 I 1
s Chiropotes_albinasus.k141_2206961                           1437 23 -     15524 ggatga---g--gc---------acc-a-tctc--t--cat-ct
i Chiropotes_albinasus.k141_2206961                      C 0 I 177
s Chlorocebus_aethiops.ctg25                              18429252 24 -  18827391 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15689 24 -     50209 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422689 24 + 135778131 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 18910 10 +     19366 -----------------------------TCTC--T--CAT-TT
i Choloepus_didactylus.ChoDid_scaffold_45914             I 13 C 0
s Choloepus_hoffmanni.KN194906.1                            173987 10 +    839153 -----------------------------TCTC--T--CAT-TT
i Choloepus_hoffmanni.KN194906.1                         I 13 C 0
s Colobus_angolensis.KN981557.1                            1911174 16 +   2368649 -------------C--------CACC-C-TCTC--T--CAT-CT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949426 16 + 200372422 -------------C--------CACC-C-TCTC--T--CAT-CT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37708 16 +     84244 -------------C--------CACC-C-TCTC--T--CAT-CT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17548630 19 -  53390261 ---CAA---C--T----------GCA-A-TCTC--T--CAT-CA
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          15003 13 -     20389 ------------------------CA-G-CCGC--G--CAT-TT
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 14 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 50599 22 +     63868 GGCTGA---A--GC--------TACC-C-AATC--C--AAT---
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 1
s Cricetulus_griseus.LT883664.1                           11668118 22 + 224834208 AGCTGA---T--AC--------TACC-C-AATC--C--CAT---
i Cricetulus_griseus.LT883664.1                          C 0 I 1
s Crocidura_indochinensis.CroInd_scaffold_37019               3567  6 -     19598 -----------------------------------T--CCT-TT
i Crocidura_indochinensis.CroInd_scaffold_37019          I 18 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29077 21 -     87169 GACCACT-GC--T----------GCA-A-TG-C--C--TAT---
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 1
s Ctenodactylus_gundi.CteGun_scaffold_65                    837660 22 +   1526836 AGCTCA---T--GC--------CACA-G-TATC--T--CAT---
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 1
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  36485 19 +     51376 GAACGT---C--AC--------TTCCCG-AGGC-----------
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 1
s Dasypus_novemcinctus.JH564415.1                            64096 24 +   2246927 GGCCTA---T--GC--------TACT-C-TCTG--T--CAC-TT
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537848 24 -  12879189 gggcag---t--gc--------aact-c-tctc--t--tgt-tt
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630706 24 +  20541912 GACCCA-GGC--T----------GCA-G-CCAT--G--CAC-TC
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673883 24 +   1390856 gaccaa-tgt--t----------aca-g-tctc--t--cat-tt
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6634 24 +    198055 gaccaa-tgc--t----------aca-g-tctc--t--cat-tt
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36968 18 +     67921 GAATGA---C--AC--------CGCA-C-TGGC-----------
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 1
s Eidolon_helvum.KE759718.1                                  11116 12 +     11740 -------------------------a-G-CCCC--T--TGT-TT
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1098318 12 +  10337057 -------------------------A-G-GAGC--T--CTT-TT
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Echinops_telfairi.JH980293.1                            48781184  3 + 111700974 GGC-----------------------------------------
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          21069 22 -    110024 AGCTGT---T--AC--------TACC-C-AATC--A--AAT---
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 1
s Ellobius_talpinus.LOJH01081419.1                             973 22 +      8657 AGCTGA---T--AT--------TACC-C-AATC--A--AAT---
i Ellobius_talpinus.LOJH01081419.1                       C 0 I 1
s Enhydra_lutris.KZ291758.1                               16329891 25 -  41312741 GACCAGTTGC--T----------GCA-CAAA-C--T--CAT-TT
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2146320  6 -  14770903 GACCAA--------------------------------------
i Eptesicus_fuscus.JH977646.1                            C 0 I 9
s Equus_asinus.JREZ01000139.1                              1284142 24 +   4378816 gaccaa-tgc--t----------aca-g-tctc--t--cat-tt
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18531962 24 -  39960074 caccaa-cgc--t----------aca-g-tctc--t--cat-tt
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               33991 24 +    498745 caccaa-tgc--t----------aca-g-tctc--t--cat-tt
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3328830 24 -   7059049 GGCCAA---TGTT----------ACC-A-TGTC--T--CAT-TT
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21205857 24 -  21539334 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_576796                              40692 24 -     44621 GGGCAA---T--GC--------CACC-G-TCTC--A--CAT-TT
i Eulemur_albifrons.k141_576796                          C 0 C 0
s Eulemur_collaris.k141_377015                                7073 24 -     16928 GGGCAA---T--GC--------CACC-G-TCTC--G--CAT-TT
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              16105 24 -     25546 GGGCAA---T--GC--------CACC-G-TCTC--G--CAT-TT
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            13301 24 +     26330 GGGCAA---T--GC--------CACC-G-TCTC--A--CGT-TT
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14536 24 +     23973 GGGCAA---T--GC--------CACC-G-TCTC--G--CAT-TT
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                13298 24 +     75513 gggcaa---t--gc--------cacc-g-tctc--a--cgt-tt
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 11228 24 +     97555 gggcaa---t--gc--------cacc-g-tctc--g--cat-tt
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              719 25 +     13026 gggcaa---t-tgc--------cacc-g-tctc--c--cgt-tt
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4772 24 -     17153 GGGCAA---T--GC--------CACC-G-TCTC--G--CAT-TT
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              14345 24 +    111500 gggcaa---t--gc--------cacc-g-tctc--g--cat-tt
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237533 23 + 206538554 GACCAG-GGC--T----------ACA-A-TG-C--T--CAT-TT
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20196376 23 + 205367284 GACCAG-GGC--T----------ACA-A-TG-C--T--CAT-TT
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 10129 23 -     36744 GACCAG-GGC--T----------ACA-A-TG-C--T--CAT-TT
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             851015 18 +   3816255 GGCTGA---C--GC--------TACC-C-TGTC-----------
i Fukomys_damarensis.KN121974.1                          C 0 I 1
s Galago_moholi.ctg2040                                     427168 24 -    453645 GGGCAA---C--GT--------GACC-C-TCTC--T--TGT-TT
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4858 24 +     11339 GGGCAA---C--GT--------GACC-C-TCTC--T--TGT-TT
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            2156 24 +     41679 GGGCAA---C--GT--------GACC-T-TCTC--T--TGT-TT
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1782 24 -      9135 GGCCAG---A--GC--------CACC-A-TCCC--T--CAC-CC
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            31949 22 +     49224 GGCCAA---G--GC--------TACC-A-TCTC--T--CAC---
i Glis_glis.GliGli_scaffold_19807                        C 0 I 1
s Gorilla_beringei.k141_3596273                              16661 24 -     32273 GGATAA---T--GC--------CACC-C-ACTC--T--CAT-TT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186338797 24 + 186649187 GGATAA---T--GC--------CACC-C-ACTC--T--CAT-TT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33198 21 +     78134 GGCCAA---G--GC--------T-CC-A-TTGC--T--CAC---
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 1
s Hapalemur_alaotrensis.k141_170648                           7400 24 -     19426 GGGCAA---T--GC--------CACC-G-TCTC--G--CAT-CA
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12553 24 -     15286 GGGCAA---T--GC--------CACC-G-TCTC--G--CAT-CA
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             14192 24 +     18253 GGGCAA---T--GC--------CACC-G-TCTC--G--CAT-CA
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         14293 24 -     41752 GGGCAA---T--GC--------CACC-G-TCTC--G--CAT-CA
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         14130 24 -     16460 GGGCAA---T--GC--------CACC-G-TCTC--G--CAT-CA
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242913 23 +    327341 GACCAGT-GC--T----------ACA-A-TG-C--C--CAC-GT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20662773 18 +  22651954 GGATGA---T--GC--------TACC-A-TTTC-----------
i Heterocephalus_glaber.JH602082.1                       C 0 I 1
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1473 22 +      7595 GGTCAA---T--GC--------T--G-G-CCTC--T--CCA-TT
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hoolock_leuconedys.ctg274                                    435457 24 +    630532 GGACGA---T--GC--------AACC-T-TCTC--T--CAT-TT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45613 26 +     55795 GACCCGT-GC--T--AC--T---ACA-A-GG-C--C--TAT-TT
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83671 18 +    135385 GGATGA---C--AC--------TTCC-A-TGTC-----------
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 1
s Ictidomys_tridecemlineatus.JH393364.1                    7521461 22 -   7955117 GGTCAA---C--GC--------TACC-A-TCTC--T--CAT---
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 1
s Indri_indri.k141_3655594                                   23090 24 +     31101 GGGCAA---T--GC--------CACC-A-TCTC--A--AGT-Tt
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8277482 22 -   9596543 ggcTCA---T--GC--------TGCC-C-ACTC--C--TAG---
i Jaculus_jaculus.JH725527.1                             C 0 I 1
s Lasiurus_borealis.LasBor_scaffold_32767                    16968 17 -     42476 ------------T----------GTC-A--CACG-CCTCAT-TG
i Lasiurus_borealis.LasBor_scaffold_32767                I 6 C 0
s Lemur_catta.scaffold_24                                 15524645 24 -  30322482 gggcaa---t--gc--------cacc-g-tctc--g--cat-ct
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        8504 23 +     64341 GGACGA---G--GC---------ACC-A-TCTC--T--CAT-CT
i Leontocebus_fuscicollis.k141_1820339                   I 194 I 78
s Leontocebus_illigeri.k141_1304848                            844 23 -     35062 GGACGA---G--GC---------ACC-A-TCTC--T--CAT-CT
i Leontocebus_illigeri.k141_1304848                      I 194 I 78
s Leontocebus_nigricollis.k141_4610752                        8531 23 +     35603 GGACGA---G--GC---------ACC-A-TCTC--T--CAT-CT
i Leontocebus_nigricollis.k141_4610752                   I 193 I 78
s Leontopithecus_chrysomelas.k141_1519602                    30222 23 +     38576 GGACGA---G--GC---------TCC-T-TCTC--T--CAT-TT
i Leontopithecus_chrysomelas.k141_1519602                I 470 C 0
s Leontopithecus_rosalia.k141_464620                         26926 23 +     66356 GGACGA---G--GC---------TCC-T-TCTC--T--CAT-TT
i Leontopithecus_rosalia.k141_464620                     I 474 C 0
s Lepilemur_ankaranensis.k141_596936                         11535 24 -     23766 GGGCAA---T--GC--------CACC-A-TCTC--G--CGT-TT
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29596 24 +     45836 GGGCAA---T--GC--------CACC-A-TCTC--G--CGT-TT
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          2134 24 +     25010 GGACAA---T--GC--------CACC-A-TCTC--G--CGT-TT
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27532 20 +     54090 ----AA---T--GC--------CACC-A-TCTC--G--CGT-TT
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3043634 24 +   3914936 GAACAGT-GC--T----------GCA-CAAG-C--T--CAT-TT
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     7065 21 -     14121 G-TCAC---G--GC--------TGCA-G-TCTC--T--TAC---
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 1
s Lophocebus_aterrimus.ctg367                              1437808 24 +   1826925 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            6416 24 +     11245 AAACAA---C--AT--------GACC-T-TCTG--T--AGT-TT
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1005237 24 +   6120653 AAACAA---C--AT--------GACC-T-TCTG--T--AGT-TT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4217910 22 -  43346337 GGCCAA---T--GC--------T--A-G-TCTC--T--CTT-TT
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17955912 23 -  59628241 GACCTGT-GC--T----------GCA-C-AT-C--T--CAT-TT
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               7623 24 +     40492 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59676882 24 +  60120075 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13398 24 -     26193 GGCAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            81182 24 -    114318 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  6869 24 -     23192 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16342 24 -     29190 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  24907 24 +     37952 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186839996 24 + 187317192 GGCAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458559 24 -  25927173 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  80755 24 +     89720 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 7756 24 +     20474 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   7556 24 -     14993 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  330422 24 -    668171 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 5869 24 -     24072 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26494 24 -     45290 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91209 13 +     94391 ------------------------ca-g-tccc--t--cat-tt
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23938085 24 -  24302211 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352208 24 +    752769 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33103658 22 -  40650429 GGTCAA---T--GC--------TACC-A-TCTC--T--CAT---
i Marmota_marmota.CZRN01000018.1                         C 0 I 1
s Megaderma_lyra.MegLyr_scaffold_4542                        11034 13 -    207569 ------------------------CA-G-TCAC--T--CAT-TT
i Megaderma_lyra.MegLyr_scaffold_4542                    I 14 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10626 25 +     13704 GACCAGTTGC--T----------GCA-CAAA-C--T--CAT-TT
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 33312 22 +    140813 GGCTGA---T--AG--------CACC-C-AGTA--C--CAT---
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 1
s Mesocricetus_auratus.KB708134.1                         12182774 22 -  29670104 AGCTGA---C--AA--------TACC-C-AATC--C--CAT---
i Mesocricetus_auratus.KB708134.1                        C 0 I 1
s Mico_argentatus.k141_1239457                                6740 23 -      7380 CGACGA---G--GC---------ACC-T-TCTC--T--CAT-TT
i Mico_argentatus.k141_1239457                           I 195 C 0
s Mico_humeralifer.k141_2457295                                932 18 +      1079 --ATGA---G--GC---------ACC-A-TCTC--T--CA----
i Mico_humeralifer.k141_2457295                          I 158 N 0
s Mico_schneideri.k141_1950671                                      6713 23 -      7356 CGACGA---G--GC---------ACC-T-TCTC--T--CAT-TT
i Mico_schneideri.k141_1950671                                 I 156 C 0
s Microcebus_murinus.CM007674.1                           18292071 24 -  93316391 GGGCAA---T--GC--------CACC-C-CCTT--G--CAT-GT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    22890  3 -    145209 GGC-----------------------------------------
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                16230 24 -     19307 AACCAAT-GC--T----------GCA-G-CCAT--G--CGC-TC
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11261022 22 -  27267610 AGCTGA---T--AC--------TAAC-C-AATC--A--AAT---
i Microtus_ochrogaster.CM001695.1                        C 0 I 1
s Miniopterus_natalensis.LDJU01000034.1                    1851200 14 +   8254450 -----------------------GCA-G-CCAC--T--CGC-CT
i Miniopterus_natalensis.LDJU01000034.1                  I 4 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34880 14 +     64694 -----------------------GCA-G-CCAC--T--CGC-CT
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 4 C 0
s Miopithecus_ogouensis.k141_534055                           9791 24 -     28506 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6502 24 -      8324 GACCAGT-GC--T----------GCA-CAAG-C--T--CAT-TT
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      9615 24 -     37649 GGGCAA---T--GC--------CCCC-C-TCTT--G--CAT-TT
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142228 24 -    366855 GACCAA-GGC--G----------GCA-G-CCCC--G--CCC-TC
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   36012 23 +     37127 GACCAGT-GC--T----------ACA-A-TG-C--C--TAT-GT
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           7422  8 +     14753 ------------T----------GCC-G--CAG-----------
i Murina_feae.MurFea_scaffold_85699                      I 6 I 11
s Mus_caroli.LT608237.1                                   84361925 22 - 120012414 GGCTGA---T--AC--------CATC-C-AATC--T--CAT---
i Mus_caroli.LT608237.1                                  C 0 I 1
s Mus_musculus.chr8                                       87650918 22 - 129401213 GGCTGA---T--AC--------CATC-C-AATC--C--CAT---
i Mus_musculus.chr8                                      C 0 I 1
s Mus_pahari.LT608297.1                                   31355575 22 -  89631738 GGCTGA---T--AC--------CATC-C-AATC--C--CAT---
i Mus_pahari.LT608297.1                                  C 0 I 1
s Mus_spretus.CM004101.1                                  90752981 22 - 130317789 GGCTGA---T--AT--------CATC-C-AATC--T--CAT---
i Mus_spretus.CM004101.1                                 C 0 I 1
s Muscardinus_avellanarius.MusAve_scaffold_82313              5524 22 +     14296 GGCCAA---G--CT--------TGTC-A-TCTC--T--CAC---
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 1
s Mustela_putorius.JH418006.1                               302040 23 -  14710649 GACCAGTTGC--T----------GCG-C--A-C--T--CAT-TT
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71806 13 -     80779 -----G---T--GC--------TGCG-C-AGGC-----------
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 I 1
s Myotis_brandtii.KE162005.1                                281059  6 -  10118263 GACCAG--------------------------------------
i Myotis_brandtii.KE162005.1                             C 0 I 9
s Myotis_davidii.KB100139.1                                1588315  6 -   6019432 GACCAG--------------------------------------
i Myotis_davidii.KB100139.1                              C 0 I 9
s Myotis_lucifugus.GL429869.1                              3904411  6 -   4330536 GACCAG--------------------------------------
i Myotis_lucifugus.GL429869.1                            C 0 I 9
s Myotis_myotis.MyoMyo_scaffold_281845                         562  6 +      1835 GACCAG--------------------------------------
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 I 9
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189849 24 +    196477 GGCCTT---C--AC--------TACT-A-TCTC--C--CAT-TT
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2034629 22 -   3037898 GACTGA---C--AC--------TGTC-C-ACTC--C--CAT---
i Nannospalax_galili.KL204047.1                          C 0 I 1
s Nasalis_larvatus.k141_413338                               15793 24 +     21681 GGAAAA---C--GC--------CACC-C-TCTC--T--CAT-TT
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308088 24 +  31847680 GACCAGT-GC--T----------GCA-CAAG-C--T--CAT-TT
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    758470 23 +    783361 GACCAA-GGC--T----------GGA-G-CCAG--G--TAG-T-
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149975 23 -   9404916 GACCTGT-GC--T----------GCA-C-AT-C--T--CAT-TT
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102586781 24 - 196305487 GAGCAA---C--AT--------GACC-T-TCTG--T--TGT-TT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              705 24 +      2075 GAGCAA---C--AT--------GACC-T-TCTG--T--TGT-TT
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105762136 24 + 199412804 GAGCAA---C--AT--------GACC-T-TCTG--T--TGT-TT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1364438 22 +   3988456 GACCAA---T--GC--------TACA-G-TCTC--C--TAC---
i Ochotona_princeps.JH802162.1                           C 0 I 1
s Octodon_degus.JH651603.1                                  747542 18 +  11899542 GAACCA---T--GC--------TGCC-T-GGGC-----------
i Octodon_degus.JH651603.1                               C 0 I 1
s Odobenus_rosmarus.KB229312.1                              507230 24 -   2017862 GACCAGT-GC--T----------GCA-CAAG-C--T--CAT-TT
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   25692 30 +     28053 AGCTGA---T--ACTACAATACTACC-T-GATC--C--CAT---
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 1
s Onychomys_torridus.OnyTor_scaffold_2986                    80701 22 +    102263 AGATGA---T--AC--------TACC-C-AATC--C--CAT---
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 1
s Orycteropus_afer.OryAfe_flattened_line_144387              10689 24 -     18566 GGCCAA---T--GC--------TATA-G-TCTC--T--CAT-TT
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147925 21 + 174332312 G-CTAA---G--GC--------TGCA-G-TCTC--T--TAC---
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 1
s Otocyon_megalotis.JAEUCK010005147.1                       462924 23 -    559221 GACCTGT-GC--T----------GCA-C-AT-C--T--CAT-TT
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4688 24 +      8798 GGGCAA---C--GT--------GACC-T-TCTC--T--TGT-TT
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696851 24 -   1103335 GGGCAA---C--GT--------GACC-T-TCTC--T--TGT-TT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    44749 24 +     80009 GGATAA---T--GC--------CACC-C-ACTC--T--CCT-TT
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189143649 24 + 189151597 GGATAA---T--GC--------CACC-C-ACTC--T--CCT-TT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  151739 23 +    230217 GACCAG-GGC--T----------ACA-A-TG-C--T--CAT-TT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                264948 23 +  18783137 GGCCAG-GGC--T----------ACG-A-TG-C--T--CAT-TT
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4721827 23 -   8748460 GGCCAG-GGC--T----------ACG-A-TG-C--T--CAT-TT
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183443885 24 + 183742232 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7531 24 +     20448 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20564343 24 +  20919399 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6275 24 +     41871 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     9568 24 +     27711 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                   565 24 -     11374 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13236 23 -     78924 GACCAG-GGC--T----------ACA-A-TG-C--T--CAT-TT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10675 24 +     13100 GAGCAA---C--AT--------GACC-T-TCTC--T--TGT-TT
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             9069 24 +     25941 GAGCAA---C--AT--------GACC-T-TCTC--T--TGT-TT
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18195326 21 -  18517816 AACTGA---T--AC--------TAAC-T-AA-C--C--CAT---
i Peromyscus_maniculatus.KI615324.1                      C 0 I 1
s Petromus_typicus.PetTyp_scaffold_42190                     28682 18 -     29689 AGATGA---T--GT--------TTCT-A-CCTT-----------
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 I 1
s Piliocolobus_badius.k141_1234363                           44284 24 +     62158 GGTAAA---C--GC--------CACC-C-TCTC--T--CAT-TT
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        39031 24 +     89929 GGTAAA---C--GC--------CACC-C-TCTC--T--CAT-TT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40447 24 +     51399 GGTAAA---C--GC--------CACC-C-TCTC--T--CAT-TT
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296685 24 -  14605196 GGTAAA---C--GC--------CACC-C-TCTC--T--CAT-TT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2357 19 +     22620 ------------T----------GCC-G--CAGGTCCGCACTCG
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 6 C 0
s Pongo_abelii.CM009266.2                                189131788 24 + 189387572 GGACAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9571395 24 +   9816681 GGACAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               73968 24 -     81375 GGAAAA---C--GC--------CACC-C-TCTC--T--CAC-TT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              5789 24 +     19060 GGAAAA---C--GC--------CACC-C-TCTC--T--CAC-TT
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 13928 22 -     22811 GGTCAA---T--GC--------T--G-G-CCTC--T--CCA-TT
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2597325 24 -   4620579 GGGCAA---T--GC--------CACC-G-TCTC--G--CAT-CA
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     991311 24 +   2598838 GGGCAA---T--GC--------CACC-A-TCTC--T--CAT-TT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29623 24 +     38485 GGGCAA---T--GC--------CACC-A-TCTC--T--CAT-TT
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1665 24 -     13098 GGGCAA---T--GC--------CACC-A-TCTC--T--CAT-TT
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          27144 24 +     35766 GGGCAA---T--GC--------CACC-A-TCTC--T--CAT-TT
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           5331 24 -     24134 GGGCAA---T--GC--------CACC-A-TCTC--T--CAT-TT
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        29156 24 -     67325 GGGCAA---T--GC--------CACC-A-TCTC--T--CAT-TT
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           5379 24 -      6182 GGGCAA---T--GC--------CACC-A-TCTC--T--CAT-TT
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            10958 22 -     21651 GGCTGA---T--AG--------CACC-C-AGTC--C--CAT---
i Psammomys_obesus.NESX01036370.1                        C 0 I 1
s Pteronotus_parnellii.KE909381.1                            15737 24 -     21811 GACCAA-GGC--T----------GCA-G-CCCC--G--CAC-TC
i Pteronotus_parnellii.KE909381.1                        I 16 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40820 25 +     42204 GACCAGTTAC--T----------GCA-CAAA-C--T--CAC-TT
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22977356 12 +  28871421 -------------------------a-g-cccc--t--cat-tt
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                7409 12 -      8028 -------------------------A-G-CCCC--T--CAT-TT
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20274898 23 -  38429054 GACCAG-GGC--T----------ACA-A-TG-C--T--CAT-TT
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15775 24 -     91421 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7609895 24 +   7812017 GGAAAA---C--GC--------CACC-C-TCTC--T--CAT-TT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             15774 24 -     72585 GGAAAA---C--GC--------CACC-C-TCTC--T--CAT-TT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53571173 22 +  90668790 GGCTGA---T--AC--------CATC-C-GATC--C--CAT---
i Rattus_norvegicus.chr16                                C 0 I 1
s Rhinopithecus_bieti.k119_217274                             7485 24 -     11128 GGAAAA---C--GC--------CACC-C-TCTC--T--CAT-TT
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236834 24 - 195417433 GGAAAA---C--GC--------CACC-C-TCTC--T--CAT-TT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672490 24 +   7961872 GGAAAA---C--GC--------CACC-C-TCTC--T--CAT-TT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88397 12 -     96226 -------------------------A-G-CCCC--T--CGT-TT
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_8081                                  1273 23 +     42994 ggacaa---g--gc---------acc-g-tctc--t--cat-ct
i Saguinus_bicolor.k141_8081                             T 117 I 624
s Saguinus_imperator.k141_1496743                              591 23 +      2253 TGATGA---G--GC---------ACC-A-TCTC--T--CAT-TT
i Saguinus_imperator.k141_1496743                        N 0 C 0
s Saguinus_inustus.k141_3945547                               1019 23 -      8737 GGATGA---G--GC---------ACC-A-TCTC--T--CAT-TT
i Saguinus_inustus.k141_3945547                          I 192 C 0
s Saguinus_labiatus.k141_4004060                               673 23 +      2343 GGACGA---G--GC---------ACC-A-TCTC--T--CAT-TT
i Saguinus_labiatus.k141_4004060                         I 192 C 0
s Saguinus_midas.LG03                                    209475239 23 + 209938924 ggacga---g--gc---------acc-g-tctc--t--cat-ct
i Saguinus_midas.LG03                                    I 194 I 312
s Saguinus_mystax.k141_374627                                 9254 23 -      9399 GGACGA---G--GC---------ACC-A-TCTC--T--CAT-TT
i Saguinus_mystax.k141_374627                            I 154 C 0
s Sapajus_apella.ctg103                                    5421340 10 -   5703754 -----------------------------TTTC--T--CAT-TC
i Sapajus_apella.ctg103                                  I 12 C 0
s Sapajus_macrocephalus.k141_351809                          56581 10 -     80660 -----------------------------TTTC--T--CAT-TC
i Sapajus_macrocephalus.k141_351809                      I 12 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951625 12 - 121099817 GGACAA---G--GC---------ACC------------------
i Saimiri_boliviensis.NW_024100920.1                     I 4 I 7
s Saimiri_cassiquiarensis.k141_2188234                       23967 12 +     46362 GGACGA---G--GC---------ACC------------------
i Saimiri_cassiquiarensis.k141_2188234                   I 4 I 7
s Saimiri_macrodon.k141_716185                               24062 12 +     45824 GGACGA---G--GC---------ACC------------------
i Saimiri_macrodon.k141_716185                           I 4 I 7
s Saimiri_oerstedii.k141_1487881                             40741 12 -     64574 GGACGA---G--GC---------ACC------------------
i Saimiri_oerstedii.k141_1487881                         I 4 I 7
s Saimiri_sciureus.k141_2278166                               3814 12 -     23631 GGACGA---G--GC---------ACC------------------
i Saimiri_sciureus.k141_2278166                          I 4 I 7
s Saimiri_ustus.k141_1484609                                 23958 12 -     61129 GGACGA---G--GC---------ACC------------------
i Saimiri_ustus.k141_1484609                             I 4 I 7
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153770 22 -    313613 AAGCAA---T--T----------GCA-A-TCTC--T--CAT-CA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                          666 24 -     12572 GGAAAA---C--GC--------CACC-C-TCTC--T--CAT-TT
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27516 24 +     39453 GGAAAA---C--GC--------CACC-C-TCTC--T--CAT-TT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            8034 24 +     27826 GGAAAA---C--GC--------CACC-C-TCTC--T--CAT-TT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             7556 24 -     19483 GGAAAA---C--GC--------CACC-C-TCTC--T--CAT-TT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                       857 24 -     12762 GGAAAA---C--GC--------CACC-C-TCTC--T--CAT-TT
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                            718 24 +     13763 GGAAAA---C--GC--------CACC-C-TCTC--T--CAT-TT
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                      854 22 -     30804 AGCTGA---T--AC--------TACC-C-AATC--A--CAT---
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 I 1
s Solenodon_paradoxus.SolPar_flattened_line_126               4337 22 +   1910179 GACCAG---T--G----------CTA-G-AGTT--T--CAT-CT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13651600  6 -  18376816 -----------------------------------t--cct-tt
i Sorex_araneus.JH798187.1                               I 15 C 0
s Spermophilus_dauricus.KZ294078.1                         1954514 22 -   3870691 GGTCAA---T--GC--------TACC-A-TCTC--T--CAT---
i Spermophilus_dauricus.KZ294078.1                       C 0 I 1
s Spilogale_gracilis.SpiGra_flattened_line_13525             31307 24 +     97271 AACCAG-GGC--T----------GCA-CAAG-C--T--CAT-TT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              18915 23 -    196729 GACCAGT-GC--T----------ACA-A-TG-C--C--TAT-TT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6811399 24 +  69701581 GACCCGT-GC--T----------GTC-G-TCTC--T--TGT-GC
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                11402 15 +     41958 ------------T----------GCC-G-TCAC--T--CGC-TG
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 6 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73208 24 +    116680 GGCCTT---G--GC--------TACT-A-TCTC--C--CAT-TT
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      119362 24 -    156842 gaccaa-tac--t----------aca-g-tctc--t--cat-tt
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387818 24 +    539355 gtccga-tgc--t----------aca-g-tctc--t--cat-tt
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               27055 24 +     70052 GGACCG---C--GC--------TTCC-G-TCTC--T--CAT-GA
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1852 24 -     16117 GGACCG---C--GC--------TTCC-G-TCTC--T--CAT-GA
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186429203 24 + 186847797 GGAAAA---T--GC--------CACC-C-TCTC--T--CAT-TT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              105987 18 +    114563 AAATGA---T--GC--------TTCC-A-CACT-----------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 1
s Tolypeutes_matacus.TolMat_scaffold_228639                   6966 20 +      8208 GGCCTG---T--GC--------CACA-C-TCTC--C--C-----
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 I 2
s Tonatia_saurophila.TonSau_scaffold_294                     81785 24 +    610378 GACAGA-GGC--T----------GCA-G-CCAC--A--CAC-TC
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         11607 24 -     20410 GGAAAA---C--GC--------CACC-C-TCTC--T--CAT-TT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                       721 24 -     12674 GGAAAA---C--GC--------CACC-C-TCTC--T--CAT-TT
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       11708 24 +     19930 GGAAAA---C--GC--------CACC-C-TCTC--T--CAT-TT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       8119 24 -     19997 GGAAAA---C--GC--------CACC-C-TCTC--T--CAT-TT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48258 24 -     60166 GGAAAA---C--GC--------CACC-C-TCTC--T--CAT-TT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        15730 24 -     27529 GGAAAA---C--GC--------CACC-C-TCTC--T--CAT-TT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     15674 24 -     18194 GGAAAA---C--GC--------CACC-C-TCTC--T--CAT-TT
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9386 24 -     21137 GGAAAA---C--GC--------CACC-C-TCTC--T--CAT-TT
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    8089 24 -     10723 GGAAAA---C--GC--------CACC-C-TCTC--T--CAT-TT
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7261 24 +      9834 GGAAAA---C--GC--------CACC-C-TCTC--T--CAT-TT
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        25574 24 +     32220 GGAAAA---C--GC--------CACC-C-TCTC--T--CAT-TT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5939676 24 +   6242583 GGAAAA---C--GC--------CACC-C-TCTC--T--CAT-TT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        8927 24 +     20839 GGAAAA---C--GC--------CACT-C-TCTC--T--CAT-TT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4293829 22 +  10818551 GGCCAA---T--GC--------T--A-G-TCTC--T--CAT-TT
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2156382 24 +   4065304 GGCCCA---T--GC--------CACC-A-CTTC--G--CAC-TT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9825 24 -     10553 GGCCCA---T--GC--------CACC-A-CCTC--T--CAC-TT
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   53881 22 -     77625 GAGCAA---T--T----------GCA-G-TCTT--T--CAC-CT
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4851023 24 -   5085361 GACCAGT-GC--T----------GCA-CAAG-C--T--CAT-TT
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  11990 24 +     50397 GGGCAA---T--GC--------CACC-G-TCTC--G--AGT-TT
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             12049 24 +     24756 GGGCAA---T--GC--------CACC-G-TCTC--G--AGT-TT
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 11375 23 -     43706 GACCTGT-GC--T----------GCA-C-AT-C--T--CAT-TT
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          1635 22 +    224448 GGCCAA---T--GC--------TACC-A-TCTG--T--AAT---
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 1
s Zapus_hudsonius.ZapHud_scaffold_11398                      15479 22 +     63895 GGTTCC---T--GC--------TACC-C-ACAC--C--CAG---
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 1
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vicugna_pacos.KN270157.1                                 5372411  6 -   5488506 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50964  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18978  0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Camelus_ferus.KB017975.1                                  403651  6 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2335354  6 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10002878  6 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       7430 4 +     62944 A-G-CT
s Acinonyx_jubatus.LLWD01001279.1                           827914 4 -   1699592 G-G-CT
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     71388 4 +     87051 T-A-CC
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 1 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511187 4 -  29979442 G-G-CT
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             79921 4 -    347723 G-G-CT
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     75090 5 -     89534 T-GGCC
i Allactaga_bullata.AllBul_scaffold_9566                 I 1 C 0
s Allenopithecus_nigroviridis.k141_3361533                   15358 4 -     52922 G-G-CC
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15274 4 -     28001 G-G-CT
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          5772 4 -     18505 G-G-CT
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           6624 4 -     12518 G-G-CT
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              8207 4 +     51355 G-C-CT
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                1316 4 -     36483 G-C-CT
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              11765 4 +     28687 G-C-CT
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                  281 4 +     27940 G-C-CT
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            1325 4 -      9457 G-C-CT
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                              281 4 +     30492 G-C-CT
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              4276 4 +     47717 G-C-CT
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              1008 4 +      5663 G-C-CT
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             15460 4 +     50774 G-C-CT
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185959 4 +    412891 G-G-CT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  16443 4 -     33861 G-G-CT
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            16440 4 -     34016 G-G-CT
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4298867 4 -   5030052 G-G-CT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             16476 4 -     34685 G-G-CT
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               29601 4 -     47192 G-G-CT
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13203 4 +     20879 T-G-CC
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 1 C 0
s Arctocebus_calabarensis.k141_2318572                       12043 4 +     14667 G-A-CT
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5349 4 +     43469 G-G-CT
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  54291 4 -     92717 G-G-CT
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54922 4 +     85213 G-G-CT
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             6327 4 -     10423 G-G-CT
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             25718 4 +     31915 C-C-AA
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_69176                              166 4 +      5377 G-G-CT
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592027 4 - 189096842 G-G-CT
i Callithrix_jacchus.pat_scaffold_3                      I 1 C 0
s Callithrix_kuhlii.k119_1168854                               841 4 -     12329 G-G-CT
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s CanFam4.chr16                                           17799776 4 -  60362399 G-G-CT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                      524 4 -     43241 G-G-CT
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9035219 4 -   9314153 G-G-CT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17959695 4 -  59632846 G-G-CT
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18500992 4 +  63665305 G-G-CT
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           156586 1 -    496798 G-----
i Carlito_syrichta.NW_007259797.1                        C 0 I 3
s Carollia_perspicillata.CarPer_scaffold_92756                5714 4 -     11696 G-G-CT
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137698 4 +    179628 T-G-TC
i Castor_canadensis.CasCan_scaffold_2074                 I 1 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     93676 4 +    217609 g-g-ct
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                         10767 4 -     11392 G-G-CT
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               6951 4 -      7577 G-G-CT
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25653396 4 +  26074798 G-G-CT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                1334 4 +     28840 G-G-CT
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 1059 4 +     14051 G-G-CT
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         6084 1 +     31688 G-----
i Cephalopachus_bancanus.k141_1423433                    C 0 I 3
s Ceratotherium_simum.JH767749.1                          12232058 4 +  27778364 g-g-ct
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3085 4 -     25243 g-g-ct
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4476289 4 +   4669795 G-G-CT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                         791 4 +     17872 G-G-CT
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           1448 4 -     14043 G-G-CT
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9481 4 +     27781 G-G-CT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         9649 4 -     20310 G-G-CT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          12629 4 +     29689 G-G-CT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7379 4 -     20078 G-G-CT
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          15297 4 -     27936 G-G-CT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            4167 4 -     17152 G-G-CT
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38817708 4 +  39242232 G-G-CT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223397 4 -  21565898 G-G-CT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40516 4 -     53127 G-G-CT
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                         767 4 +     13442 G-G-CT
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15316 4 -     27947 G-G-CT
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         15292 4 +     17596 G-G-CT
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          1339 4 +     14005 G-G-CT
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1098 4 -      8501 A-G-CC
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             21669 4 -     52598 G-G-CT
i Cheirogaleus_major.k141_333249                         I 5 C 0
s Cheirogaleus_medius.k141_1055463                           17036 4 +     57038 G-G-CT
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2206961                           1637 4 -     15524 a-g-gc
i Chiropotes_albinasus.k141_2206961                      I 177 C 0
s Chlorocebus_aethiops.ctg25                              18429276 4 -  18827391 G-G-CT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15713 4 -     50209 G-G-CT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422713 4 + 135778131 G-G-CT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 18920 4 +     19366 A-G-CT
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            173997 4 +    839153 A-G-CT
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1911190 4 +   2368649 G-G-CT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949442 4 + 200372422 G-G-CT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37724 4 +     84244 G-G-CT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17548649 4 -  53390261 A-T-CC
i Condylura_cristata.JH655891.1                          C 0 I 2
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          15016 4 -     20389 G-G-TT
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 50622 4 +     63868 T-G-CC
i Cricetomys_gambianus.CriGam_scaffold_18520             I 1 C 0
s Cricetulus_griseus.LT883664.1                           11668141 4 + 224834208 T-G-CC
i Cricetulus_griseus.LT883664.1                          I 1 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               3573 4 -     19598 A-A-CT
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29099 4 -     87169 G-G-CT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 1 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837683 5 +   1526836 T-GACC
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 1 C 0
s Dasypus_novemcinctus.JH564415.1                            64120 4 +   2246927 T-G-CT
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537872 4 -  12879189 g-g-ct
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630730 4 +  20541912 G-G-CT
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673907 4 +   1390856 g-g-ct
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6658 4 +    198055 g-g-ct
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE759718.1                                  11128 4 +     11740 G-G-CT
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1098330 4 +  10337057 G-T-CT
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          21092 4 -    110024 T-A-CC
i Ellobius_lutescens.LOEQ01008920.1                      I 1 C 0
s Ellobius_talpinus.LOJH01081419.1                             996 4 +      8657 T-A-CC
i Ellobius_talpinus.LOJH01081419.1                       I 1 C 0
s Enhydra_lutris.KZ291758.1                               16329916 4 -  41312741 G-G-CT
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2146335 4 -  14770903 G-C-TT
i Eptesicus_fuscus.JH977646.1                            I 9 I 1
s Equus_asinus.JREZ01000139.1                              1284166 4 +   4378816 g-g-ct
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18531986 4 -  39960074 g-g-ct
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               34015 4 +    498745 g-g-ct
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3328854 4 -   7059049 A-C-TT
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21205881 4 -  21539334 G-G-CT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_576796                              40716 4 -     44621 G-G-CT
i Eulemur_albifrons.k141_576796                          C 0 C 0
s Eulemur_collaris.k141_377015                                7097 4 -     16928 G-G-CT
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              16129 4 -     25546 G-G-CT
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            13325 4 +     26330 G-G-CT
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14560 4 +     23973 G-G-CT
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                13322 4 +     75513 g-g-ct
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 11252 4 +     97555 g-g-ct
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              744 4 +     13026 g-g-ct
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4796 4 -     17153 G-G-CT
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              14369 4 +    111500 g-g-ct
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237556 4 + 206538554 G-G-CT
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20196399 4 + 205367284 G-G-CT
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 10152 4 -     36744 G-G-CT
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     427192 4 -    453645 G-A-CT
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4882 4 +     11339 G-A-CT
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            2180 4 +     41679 G-A-CT
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1806 4 -      9135 G-G-CT
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            31972 4 +     49224 T-G-CC
i Glis_glis.GliGli_scaffold_19807                        I 1 C 0
s Gorilla_beringei.k141_3596273                              16685 4 -     32273 A-G-CT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186338821 4 + 186649187 A-G-CT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33220 4 +     78134 T-A-CC
i Graphiurus_murinus.GraMur_scaffold_10447               I 1 C 0
s Hapalemur_alaotrensis.k141_170648                           7424 4 -     19426 G-G-CT
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12577 4 -     15286 G-G-CT
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             14216 4 +     18253 G-G-CT
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         14317 4 -     41752 G-G-CT
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         14154 4 -     16460 G-G-CT
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242936 4 +    327341 G-G-CT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1495 4 +      7595 G-G-CT
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hoolock_leuconedys.ctg274                                    435481 4 +    630532 G-G-CT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45639 4 +     55795 G-G-CT
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7521484 4 -   7955117 T-G-CC
i Ictidomys_tridecemlineatus.JH393364.1                  I 1 C 0
s Indri_indri.k141_3655594                                   23114 4 +     31101 g-g-ct
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8277505 5 -   9596543 T-GGCC
i Jaculus_jaculus.JH725527.1                             I 1 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    16985 4 -     42476 G-A-AT
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 1
s Lemur_catta.scaffold_24                                 15524669 4 -  30322482 g-g-ct
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        8605 4 +     64341 G-G-CT
i Leontocebus_fuscicollis.k141_1820339                   I 78 C 0
s Leontocebus_illigeri.k141_1304848                            945 4 -     35062 G-G-CT
i Leontocebus_illigeri.k141_1304848                      I 78 C 0
s Leontocebus_nigricollis.k141_4610752                        8632 4 +     35603 G-G-CT
i Leontocebus_nigricollis.k141_4610752                   I 78 C 0
s Leontopithecus_chrysomelas.k141_1519602                    30245 4 +     38576 G-G-CT
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         26949 4 +     66356 G-G-CT
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         11559 4 -     23766 G-G-CT
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29620 4 +     45836 G-G-CT
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          2158 4 +     25010 G-G-CT
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27552 4 +     54090 G-G-CT
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3043658 4 +   3914936 G-G-CT
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     7087 5 -     14121 GGG-CT
i Lepus_americanus.LepAme_scaffold_107385                I 1 C 0
s Lophocebus_aterrimus.ctg367                              1437832 4 +   1826925 G-G-CT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            6440 4 +     11245 G-A-CT
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1005261 4 +   6120653 G-A-CT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4217932 4 -  43346337 G-G-CT
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17955935 4 -  59628241 G-G-CT
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               7647 4 +     40492 G-G-CT
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59676906 4 +  60120075 G-G-CT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13422 4 -     26193 G-G-CT
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            81206 4 -    114318 G-G-CT
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  6893 4 -     23192 G-G-CT
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16366 4 -     29190 G-G-CT
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  24931 4 +     37952 G-G-CT
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186840020 4 + 187317192 G-G-CT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458583 4 -  25927173 G-G-CT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  80779 4 +     89720 G-G-CT
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 7780 4 +     20474 G-G-CT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   7580 4 -     14993 G-G-CT
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  330446 4 -    668171 G-G-CT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 5893 4 -     24072 G-G-CT
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26518 4 -     45290 G-G-CT
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91222 4 +     94391 g-g-ct
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23938109 4 -  24302211 G-G-CT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352232 4 +    752769 G-G-CT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33103681 4 -  40650429 T-G-CC
i Marmota_marmota.CZRN01000018.1                         I 1 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        11047 4 -    207569 G-G-TT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10651 4 +     13704 G-G-CT
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 33335 2 +    140813 T-G---
i Meriones_unguiculatus.MerUng_scaffold_7390             I 1 C 0
s Mesocricetus_auratus.KB708134.1                         12182797 4 -  29670104 T-G-CC
i Mesocricetus_auratus.KB708134.1                        I 1 C 0
s Mico_argentatus.k141_1239457                                6763 4 -      7380 G-G-CT
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_schneideri.k141_1950671                                      6736 4 -      7356 G-G-CT
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18292095 4 -  93316391 G-G-CT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                16254 4 -     19307 G-G-CT
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11261045 4 -  27267610 T-A-CC
i Microtus_ochrogaster.CM001695.1                        I 1 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1851214 4 +   8254450 G-G-CC
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34894 4 +     64694 G-G-CC
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9815 4 -     28506 G-G-CT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6526 4 -      8324 G-G-CT
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      9639 4 -     37649 G-G-CT
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142252 4 -    366855 G-G-CT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   36035 4 +     37127 G-G-CT
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           7441 4 +     14753 G-C-TT
i Murina_feae.MurFea_scaffold_85699                      I 11 I 1
s Mus_caroli.LT608237.1                                   84361948 4 - 120012414 T-G-CC
i Mus_caroli.LT608237.1                                  I 1 C 0
s Mus_musculus.chr8                                       87650941 4 - 129401213 T-G-CC
i Mus_musculus.chr8                                      I 1 C 0
s Mus_pahari.LT608297.1                                   31355598 4 -  89631738 T-G-CC
i Mus_pahari.LT608297.1                                  I 1 C 0
s Mus_spretus.CM004101.1                                  90753004 4 - 130317789 T-G-CC
i Mus_spretus.CM004101.1                                 I 1 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              5547 2 +     14296 T-G---
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 1 I 814
s Mustela_putorius.JH418006.1                               302063 4 -  14710649 G-G-CT
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                281074 4 -  10118263 T-C-TT
i Myotis_brandtii.KE162005.1                             I 9 I 1
s Myotis_davidii.KB100139.1                                1588330 4 -   6019432 C-C-TT
i Myotis_davidii.KB100139.1                              I 9 I 1
s Myotis_lucifugus.GL429869.1                              3904426 4 -   4330536 C-C-TT
i Myotis_lucifugus.GL429869.1                            I 9 I 1
s Myotis_myotis.MyoMyo_scaffold_281845                         577 4 +      1835 C-C-TT
i Myotis_myotis.MyoMyo_scaffold_281845                   I 9 I 1
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189873 4 +    196477 A-G-GT
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2034652 4 -   3037898 T-G-CC
i Nannospalax_galili.KL204047.1                          I 1 C 0
s Nasalis_larvatus.k141_413338                               15817 4 +     21681 G-G-CT
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308112 4 +  31847680 G-G-CT
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    758493 1 +    783361 -----T
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9149998 4 -   9404916 G-G-CT
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102586805 4 - 196305487 G-A-AT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              729 4 +      2075 G-A-AT
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105762160 4 + 199412804 G-A-CT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1364461 4 +   3988456 G-A-CT
i Ochotona_princeps.JH802162.1                           I 1 C 0
s Odobenus_rosmarus.KB229312.1                              507254 4 -   2017862 G-G-CT
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   25723 4 +     28053 T-A-CC
i Ondatra_zibethicus.OndZib_scaffold_46174               I 1 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    80724 4 +    102263 T-G-CC
i Onychomys_torridus.OnyTor_scaffold_2986                I 1 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387              10713 4 -     18566 G-G-CT
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147947 5 + 174332312 GGG-CT
i Oryctolagus_cuniculus.CM000791.1                       I 1 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462947 4 -    559221 G-G-CT
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4712 4 +      8798 G-A-CT
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696875 4 -   1103335 G-A-CT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    44773 4 +     80009 A-G-CT
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189143673 4 + 189151597 A-G-CT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  151762 4 +    230217 G-G-CT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                264971 4 +  18783137 G-G-CT
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4721850 4 -   8748460 G-G-CT
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183443909 4 + 183742232 G-G-CT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7555 4 +     20448 G-G-CT
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20564367 4 +  20919399 G-G-CT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6299 4 +     41871 G-G-CT
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     9592 4 +     27711 G-G-CT
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                   589 4 -     11374 G-G-CT
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13259 4 -     78924 G-G-TT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10699 4 +     13100 G-A-CT
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             9093 4 +     25941 G-A-CT
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18195348 4 -  18517816 T-G-CC
i Peromyscus_maniculatus.KI615324.1                      I 1 C 0
s Piliocolobus_badius.k141_1234363                           44308 4 +     62158 G-G-CT
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        39055 4 +     89929 G-G-CT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40471 4 +     51399 G-G-CT
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296709 4 -  14605196 G-G-CT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2376 4 +     22620 G-C-TT
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 1
s Pongo_abelii.CM009266.2                                189131812 4 + 189387572 G-G-CT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9571419 4 +   9816681 G-G-CT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               73992 4 -     81375 G-G-CT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              5813 4 +     19060 G-G-CT
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 13950 4 -     22811 G-G-CT
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2597349 4 -   4620579 G-G-CT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     991335 4 +   2598838 G-G-CT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29647 4 +     38485 G-G-CT
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1689 4 -     13098 G-G-CT
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          27168 4 +     35766 G-G-CT
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           5355 4 -     24134 G-G-CT
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        29180 4 -     67325 G-G-CT
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           5403 4 -      6182 G-G-CT
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            10981 2 -     21651 T-G---
i Psammomys_obesus.NESX01036370.1                        I 1 C 0
s Pteronotus_parnellii.KE909381.1                            15761 4 -     21811 C-G-CG
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40845 4 +     42204 G-G-CT
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22977368 4 +  28871421 g-g-ct
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                7421 4 -      8028 G-G-CT
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20274921 4 -  38429054 G-G-CT
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15799 4 -     91421 G-G-CT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7609919 4 +   7812017 G-G-CT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             15798 4 -     72585 G-G-CT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53571196 4 +  90668790 T-G-CC
i Rattus_norvegicus.chr16                                I 1 C 0
s Rhinopithecus_bieti.k119_217274                             7509 4 -     11128 G-G-CT
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236858 4 - 195417433 G-G-CT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672514 4 +   7961872 G-G-CT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88409 4 -     96226 G-G-CT
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_8081                                  1920 4 +     42994 G-G-CT
i Saguinus_bicolor.k141_8081                             I 624 C 0
s Saguinus_imperator.k141_1496743                              614 4 +      2253 G-G-CT
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               1042 4 -      8737 G-G-CT
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                               696 4 +      2343 A-G-CT
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209475574 4 + 209938924 G-G-CT
i Saguinus_midas.LG03                                    I 312 C 0
s Saguinus_mystax.k141_374627                                 9277 4 -      9399 G-G-CT
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951644 4 - 121099817 G-G-CT
i Saimiri_boliviensis.NW_024100920.1                     I 7 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23986 4 +     46362 G-G-CT
i Saimiri_cassiquiarensis.k141_2188234                   I 7 C 0
s Saimiri_macrodon.k141_716185                               24081 4 +     45824 G-G-CT
i Saimiri_macrodon.k141_716185                           I 7 C 0
s Saimiri_oerstedii.k141_1487881                             40760 4 -     64574 G-G-CT
i Saimiri_oerstedii.k141_1487881                         I 7 C 0
s Saimiri_sciureus.k141_2278166                               3833 4 -     23631 G-G-CT
i Saimiri_sciureus.k141_2278166                          I 7 C 0
s Saimiri_ustus.k141_1484609                                 23977 4 -     61129 G-G-CT
i Saimiri_ustus.k141_1484609                             I 7 C 0
s Sapajus_apella.ctg103                                    5421350 4 -   5703754 G-G-CT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          56591 4 -     80660 G-G-CT
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153792 4 -    313613 A-G-CC
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                          690 4 -     12572 G-G-CT
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27540 4 +     39453 G-G-CT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            8058 4 +     27826 G-G-CT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             7580 4 -     19483 G-G-CT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                       881 4 -     12762 G-G-CT
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                            742 4 +     13763 G-G-CT
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                      877 4 -     30804 T-G-CC
i Sigmodon_hispidus.SigHis_scaffold_42075                I 1 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               4359 1 +   1910179 -----C
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 2
s Sorex_araneus.JH798187.1                                13651606 4 -  18376816 a-c-tt
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1954537 4 -   3870691 T-G-CC
i Spermophilus_dauricus.KZ294078.1                       I 1 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             31331 4 +     97271 G-G-CT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              18938 4 -    196729 G-G-TG
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6811423 4 +  69701581 G-G-CT
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                11417 4 +     41958 G-G-CT
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73232 4 +    116680 A-G-CT
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      119386 4 -    156842 g-g-ct
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387842 4 +    539355 g-g-ct
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               27079 1 +     70052 G-----
i Tarsius_lariang.k141_2201908                           C 0 I 3
s Tarsius_wallacei.k141_254427                                1876 1 -     16117 G-----
i Tarsius_wallacei.k141_254427                           C 0 I 3
s Theropithecus_gelada.CM009954.1                        186429227 4 + 186847797 G-G-CT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   6988 4 +      8208 G-G-CT
i Tolypeutes_matacus.TolMat_scaffold_228639              I 2 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81809 4 +    610378 G-G-CT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         11631 4 -     20410 G-G-CT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                       745 4 -     12674 G-G-CT
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       11732 4 +     19930 G-G-CT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       8143 4 -     19997 G-G-CT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48282 4 -     60166 G-G-CT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        15754 4 -     27529 G-G-CT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     15698 4 -     18194 G-G-CT
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9410 4 -     21137 G-G-CT
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    8113 4 -     10723 G-G-CT
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7285 4 +      9834 G-G-CT
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        25598 4 +     32220 G-G-CT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5939700 4 +   6242583 G-G-CT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        8951 4 +     20839 G-G-CT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4293851 4 +  10818551 G-G-CT
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2156406 4 +   4065304 G-G-CT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9849 4 -     10553 G-G-CT
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   53903 4 -     77625 A-G-TC
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4851047 4 -   5085361 G-G-CT
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  12014 4 +     50397 G-G-CT
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             12073 4 +     24756 G-G-CT
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 11398 4 -     43706 G-G-CT
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          1658 4 +    224448 T-G-CC
i Xerus_inauris.XerIna_scaffold_2302                     I 1 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      15502 5 +     63895 T-CACC
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 1 C 0
e Echinops_telfairi.JH980293.1                            48781187 0 + 111700974 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vicugna_pacos.KN270157.1                                 5372411 6 -   5488506 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              106005 1 +    114563 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     28700 1 -     29689 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  747560 1 +  11899542 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     71819 1 -     80779 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Microgale_talazaci.MicTal_scaffold_6613                    22893 0 -    145209 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50964 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18978 0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      83689 1 +    135385 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20662791 1 +  22651954 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Fukomys_damarensis.KN121974.1                             851033 1 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    36986 1 +     67921 I
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  36504 1 +     51376 I
e Chinchilla_lanigera.JH722012.1                           1253507 1 +   2543920 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capromys_pilorides.CapPil_scaffold_65020                    1632 1 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Camelus_ferus.KB017975.1                                  403651 6 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2335354 6 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10002878 6 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       7434  8 +     62944 T-C-C-CTGTC
s Acinonyx_jubatus.LLWD01001279.1                           827918  8 -   1699592 T-C-C-CCATC
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     71392  9 +     87051 TTC-C-AGACC
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511191  8 -  29979442 T-C-A-CCACC
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             79925  8 -    347723 T-C-A-CCACC
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     75095  9 -     89534 TTC-T-CTATC
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   15362  8 -     52922 T-C-C-CTGCC
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15278  8 -     28001 T-C-C-CTGCC
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          5776  8 -     18505 T-C-C-CTGCC
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           6628  8 -     12518 T-C-C-CTGCC
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              8211  8 +     51355 T-C-C-CTGTC
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                1320  8 -     36483 T-C-C-CTGTC
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              11769  8 +     28687 T-C-C-CTGTC
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                  285  8 +     27940 T-C-C-CTGTC
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            1329  8 -      9457 T-C-C-CTGTC
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                              285  8 +     30492 T-C-C-CTGTC
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              4280  8 +     47717 T-C-C-CTGTC
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              1012  8 +      5663 T-C-C-CTGTC
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             15464  8 +     50774 T-C-C-CTGTC
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      185963  8 +    412891 T-C-C-CCATC
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  16447  8 -     33861 T-C-C-CTGCC
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            16444  8 -     34016 T-C-C-CTGCC
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4298871  8 -   5030052 T-C-C-CTGCC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             16480  8 -     34685 T-C-C-CTGCC
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               29605  8 -     47192 T-C-C-CTGCC
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13207  9 +     20879 T-TCC-CCACC
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       12047  8 +     14667 G-T-T-CTGCC
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5353  8 +     43469 T-C-C-CCACC
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  54295  8 -     92717 G-C-C-TTGTC
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54926  8 +     85213 G-C-C-TTGTC
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             6331  8 -     10423 T-C-C-CTGCC
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_1091182                             25722  8 +     31915 C-A-C-CTTCA
i Callimico_goeldii.k141_1091182                         C 0 C 0
s Callithrix_geoffroyi.k119_69176                              170  8 +      5377 T-C-C-CTGCC
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592031  8 - 189096842 T-C-C-CTGCC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                               845  8 -     12329 T-C-C-CTGCC
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s CanFam4.chr16                                           17799780  8 -  60362399 T-C-A-ACACC
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                      528  8 -     43241 T-C-A-ACACC
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9035223  8 -   9314153 T-C-A-ACACC
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17959699  8 -  59632846 T-C-A-ACACC
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18500996  8 +  63665305 T-C-A-ACACC
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5718  8 -     11696 C-C-C-CCACC
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137702  9 +    179628 T-TCT-GTATG
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     93680  8 +    217609 t-c-c-ccact
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                         10771  8 -     11392 T-C-C-CTGCC
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               6955  8 -      7577 T-C-C-CTGCC
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25653400  8 +  26074798 T-C-C-CTGCC
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                1338  8 +     28840 T-C-C-CTGCC
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 1063  8 +     14051 T-C-C-CTGCC
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Ceratotherium_simum.JH767749.1                          12232062  8 +  27778364 t-t-c-ccact
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3089  8 -     25243 t-t-c-ccact
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4476293  8 +   4669795 T-C-C-CTGCC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                         795  8 +     17872 T-C-C-CTGCC
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           1452  8 -     14043 T-C-C-CTGCC
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9485  8 +     27781 T-C-C-CTGCC
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         9653  8 -     20310 T-C-C-CTGCC
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          12633  8 +     29689 T-C-C-CTCCC
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7383  8 -     20078 T-C-C-CTGCC
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          15301  8 -     27936 T-C-C-CTGCC
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            4171  8 -     17152 T-C-C-CTGCC
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38817712  8 +  39242232 T-C-C-CTGCC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223401  8 -  21565898 T-C-C-CTGCC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40520  8 -     53127 T-C-C-CTGCC
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                         771  8 +     13442 T-C-C-CTGCC
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15320  8 -     27947 T-C-C-CTGCC
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         15296  8 +     17596 T-C-C-CTGCC
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          1343  8 +     14005 T-C-C-CTGCC
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1102  8 -      8501 T-C-C-TCACC
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             21673  8 -     52598 G-C-T-CTGCC
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           17040  8 +     57038 G-C-T-CTGCT
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chiropotes_albinasus.k141_2206961                           1641  8 -     15524 a-c-c-atgtc
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18429280  8 -  18827391 T-C-C-CTGCC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15717  8 -     50209 T-C-C-CTGCC
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422717  8 + 135778131 T-C-C-CTGCC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 18924  8 +     19366 T-C-C-TCACC
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            174001  8 +    839153 T-C-C-TCACC
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1911194  8 +   2368649 T-C-C-CTGCC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949446  8 + 200372422 T-C-C-CTGCC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37728  8 +     84244 T-C-C-CTGCC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17548655  5 -  53390261 ------TTACC
i Condylura_cristata.JH655891.1                          I 2 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          15020  7 -     20389 T-C-C--CTTC
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 50626  9 +     63868 TTC-C-ATACC
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11668145  9 + 224834208 TTC-T-ATACC
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               3577  8 -     19598 T-C-C-CCATT
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29103  8 -     87169 T-T-C-CCACC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837688  8 +   1526836 T-T-C-CTACC
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            64124  8 +   2246927 T-C-C-TCACC
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537876  8 -  12879189 g-c-c-ctgtc
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630734  8 +  20541912 T-C-C-CCACC
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673911  8 +   1390856 t-t-c-ccact
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6662  8 +    198055 t-t-c-ccact
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE759718.1                                  11132  8 +     11740 T-C-C-TCACC
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1098334  8 +  10337057 T-C-T-CCATT
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          21096  9 -    110024 TAC-T-ATCCC
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                            1000  9 +      8657 TAC-T-ATACC
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16329920  8 -  41312741 T-C-A-CCACC
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2146340  6 -  14770903 ----C-CCACC
i Eptesicus_fuscus.JH977646.1                            I 1 C 0
s Equus_asinus.JREZ01000139.1                              1284170  8 +   4378816 t-c-c-ccacg
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18531990  8 -  39960074 t-c-c-ccacg
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               34019  8 +    498745 t-c-c-ccacg
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3328858  8 -   7059049 T-T-C-CTGCC
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21205885  8 -  21539334 T-C-C-CTGCC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_576796                              40720  8 -     44621 G-C-C-CTGCC
i Eulemur_albifrons.k141_576796                          C 0 C 0
s Eulemur_collaris.k141_377015                                7101  8 -     16928 G-C-C-CTGCC
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              16133  8 -     25546 G-C-C-CTGCC
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            13329  8 +     26330 G-C-C-CTGCC
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14564  8 +     23973 G-C-C-CTGCC
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                13326  8 +     75513 g-c-c-ctgcc
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 11256  8 +     97555 g-c-c-ctgcc
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              748  8 +     13026 a-c-c-ctgcc
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4800  8 -     17153 G-C-C-CTGCC
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              14373  8 +    111500 g-c-c-ctgcc
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237560  8 + 206538554 T-C-C-CCATC
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20196403  8 + 205367284 T-C-C-CCATC
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 10156  8 -     36744 T-C-C-CCATC
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     427196  8 -    453645 G-C-T-CTGCC
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4886  8 +     11339 G-C-T-CTGCC
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            2184  8 +     41679 G-C-T-CTGCC
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1810  8 -      9135 T-C-C-CTACC
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            31976  8 +     49224 T-C-C-CTACC
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              16689  8 -     32273 T-C-C-CTGTC
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186338825  8 + 186649187 T-C-C-CTGTC
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33224  8 +     78134 T-C-C-TTACC
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           7428  8 -     19426 G-C-C-CTGCC
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12581  8 -     15286 G-C-C-CTGCC
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             14220  8 +     18253 G-C-C-CTGCC
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         14321  8 -     41752 G-C-C-CTGCC
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         14158  8 -     16460 G-C-C-CTGCC
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242940  8 +    327341 T-T-C-CCACC
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1499  8 +      7595 A-C-C-TAGCC
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hoolock_leuconedys.ctg274                                    435485  8 +    630532 T-C-C-CTGCC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45643  8 +     55795 T-T-C-CCACC
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7521488  9 -   7955117 T-CCC-TTATC
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   23118  8 +     31101 g-c-c-ctgtc
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8277510  9 -   9596543 TTC-T-CTATC
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    16990  6 -     42476 ----C-CCACC
i Lasiurus_borealis.LasBor_scaffold_32767                I 1 C 0
s Lemur_catta.scaffold_24                                 15524673  8 -  30322482 g-c-c-ctgcc
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        8609  8 +     64341 T-C-C-CTGCC
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                            949  8 -     35062 T-C-C-CTGCC
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        8636  8 +     35603 T-C-C-CTGCC
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    30249  8 +     38576 T-C-C-CTGCC
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         26953  8 +     66356 T-C-C-CTGCC
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         11563  8 -     23766 G-C-C-CTGCC
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29624  8 +     45836 G-C-C-CTGCC
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          2162  8 +     25010 G-C-C-CTGCC
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27556  8 +     54090 G-C-C-CTGCC
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3043662  8 +   3914936 T-C-A-CCACC
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     7092  8 -     14121 C-C-C-CTACC
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437836  8 +   1826925 T-C-C-CTGCC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            6444  8 +     11245 G-C-T-CTGCC
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1005265  8 +   6120653 G-C-T-CTGCC
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4217936  8 -  43346337 T-C-C-CCACC
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17955939  8 -  59628241 T-C-A-ACACC
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               7651  8 +     40492 T-C-C-CTGCC
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59676910  8 +  60120075 T-C-C-CTGCC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13426  8 -     26193 T-C-C-CTGCC
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            81210  8 -    114318 T-C-C-CTGCC
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  6897  8 -     23192 T-C-C-CTGCC
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16370  8 -     29190 T-C-C-CTGCC
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  24935  8 +     37952 T-C-C-CTGCC
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186840024  8 + 187317192 T-C-C-CTGCC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458587  8 -  25927173 T-C-C-CTGCC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  80783  8 +     89720 T-C-C-CTGCC
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 7784  8 +     20474 T-C-C-CTGCC
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   7584  8 -     14993 T-C-C-CTGCC
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  330450  8 -    668171 T-C-C-CTGCC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 5897  8 -     24072 T-C-C-CTGCC
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26522  8 -     45290 T-C-C-CTGCC
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91226  8 +     94391 t-c-c-tcacc
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23938113  8 -  24302211 T-C-C-CTGCC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352236  7 +    752769 T-C-C--TGCC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33103685  9 -  40650429 T-TCC-TTATC
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        11051  7 -    207569 T-C-C--CTCC
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10655  8 +     13704 T-C-A-CCACC
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 33337  9 +    140813 TTT-C-ATACC
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12182801  9 -  29670104 TCC-T-ATACC
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                6767  8 -      7380 T-C-C-CTGCC
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_schneideri.k141_1950671                                      6740  8 -      7356 T-C-C-CTGCC
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18292099  8 -  93316391 G-C-C-CTGCC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                16258  8 -     19307 T-C-C-CCACC
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11261049  9 -  27267610 TAC-T-ACACC
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1851218  4 +   8254450 ----C-C--CC
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34898  4 +     64694 ----C-C--CC
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9819  8 -     28506 T-C-C-CTGCC
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6530  8 -      8324 T-C-A-CCACC
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      9643  8 -     37649 A-C-C-CTGTC
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142256  8 -    366855 G-C-C-CTACA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   36039  8 +     37127 T-T-C-CCACC
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           7446  6 +     14753 ----C-CCACC
i Murina_feae.MurFea_scaffold_85699                      I 1 C 0
s Mus_caroli.LT608237.1                                   84361952  9 - 120012414 TTC-A-ATACC
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87650945  9 - 129401213 TTC-A-ATACC
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31355602  9 -  89631738 TTC-A-ATACC
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90753008  9 - 130317789 TTC-A-ATACC
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               302067  8 -  14710649 T-C-A-CCACC
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                281079  6 -  10118263 ----C-CCACC
i Myotis_brandtii.KE162005.1                             I 1 C 0
s Myotis_davidii.KB100139.1                                1588335  6 -   6019432 ----C-CCACC
i Myotis_davidii.KB100139.1                              I 1 C 0
s Myotis_lucifugus.GL429869.1                              3904431  6 -   4330536 ----C-CCACC
i Myotis_lucifugus.GL429869.1                            I 1 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                         582  6 +      1835 ----C-CCACC
i Myotis_myotis.MyoMyo_scaffold_281845                   I 1 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189877  8 +    196477 T-C-T-TCACC
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2034656  9 -   3037898 TTC-C-CTTCC
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               15821  8 +     21681 T-C-C-CTGCC
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308116  8 +  31847680 T-C-A-CCACC
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    758494  5 +    783361 ------TCACC
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150002  8 -   9404916 T-C-A-ACACC
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102586809  8 - 196305487 G-C-T-CTGCC
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              733  8 +      2075 G-C-T-CTGCC
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105762164  8 + 199412804 G-C-T-CTGCC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1364465  8 +   3988456 C-C-A-TTACT
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              507258  8 -   2017862 T-C-A-CCACC
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   25727  9 +     28053 TAC-T-ATACC
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    80728 10 +    102263 TTC-TCATACC
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387              10717  8 -     18566 T-T-C-CCACC
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147952  8 + 174332312 G-C-C-CTACC
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462951  8 -    559221 T-C-A-ACACC
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4716  8 +      8798 G-C-T-CTGCC
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696879  8 -   1103335 G-C-T-CTGCC
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    44777  8 +     80009 T-C-C-CTGTC
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189143677  8 + 189151597 T-C-C-CTGTC
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  151766  8 +    230217 T-C-C-CCATC
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                264975  8 +  18783137 T-C-C-CCATC
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4721854  8 -   8748460 T-C-C-CCATC
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183443913  8 + 183742232 T-C-C-CTGCC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7559  8 +     20448 T-C-C-CTGCC
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20564371  8 +  20919399 T-C-C-CTGCC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6303  8 +     41871 T-C-C-CTGCC
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     9596  8 +     27711 T-C-C-CTGCC
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                   593  8 -     11374 T-C-C-CTGCC
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13263  8 -     78924 T-C-C-CCACC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10703  8 +     13100 G-C-T-CTGCC
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             9097  8 +     25941 G-C-T-CTGCC
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18195352  9 -  18517816 TTC-T-ATACC
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Piliocolobus_badius.k141_1234363                           44312  8 +     62158 T-C-C-CTGCC
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        39059  8 +     89929 T-C-C-CTGCC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40475  8 +     51399 T-C-C-CTGCC
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296713  8 -  14605196 T-C-T-CTGCC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2381  6 +     22620 ----C-CCACC
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 1 C 0
s Pongo_abelii.CM009266.2                                189131816  8 + 189387572 T-C-C-CTGCC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9571423  8 +   9816681 T-C-C-CTGCC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               73996  8 -     81375 T-C-C-CTGCC
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              5817  8 +     19060 T-C-C-CTGCC
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 13954  8 -     22811 C-C-C-TAGCC
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2597353  8 -   4620579 G-C-C-CTGCC
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     991339  8 +   2598838 G-C-C-CTGTC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29651  8 +     38485 G-C-C-CTGTC
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1693  8 -     13098 G-C-C-CTGTC
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          27172  8 +     35766 G-C-C-CTGTC
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           5359  8 -     24134 G-C-C-CTGTC
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        29184  8 -     67325 G-A-C-CTGTC
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           5407  8 -      6182 G-C-C-CTGTC
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            10983  9 -     21651 TTT-C-ATACC
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            15765  8 -     21811 T-C-C-CCTCC
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40849  8 +     42204 T-C-A-CCACC
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22977372  8 +  28871421 t-c-c-tcacc
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                7425  8 -      8028 T-C-C-TCACC
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20274925  8 -  38429054 T-C-C-CCATC
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15803  8 -     91421 T-C-C-CTGCC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7609923  8 +   7812017 T-C-C-CTGCC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             15802  8 -     72585 T-C-C-CTGCC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53571200  9 +  90668790 TTC-C-ATACC
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                             7513  8 -     11128 T-C-C-CTGCC
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236862  8 - 195417433 T-C-C-CTGCC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672518  8 +   7961872 T-C-C-CTGCC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88413  8 -     96226 T-C-C-TCGCC
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_8081                                  1924  8 +     42994 T-C-C-CTGCC
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                              618  8 +      2253 T-C-C-CTGCC
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               1046  8 -      8737 T-C-C-CTGCC
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                               700  8 +      2343 T-C-C-CTGCC
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209475578  8 + 209938924 T-C-C-CTGCC
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 9281  8 -      9399 T-C-C-CTGCC
i Saguinus_mystax.k141_374627                            C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951648  8 - 121099817 T-C-C-CTGCC
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       23990  8 +     46362 T-C-C-CTGCC
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               24085  8 +     45824 T-C-C-CTGCC
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             40764  8 -     64574 T-C-C-CTGCC
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               3837  8 -     23631 T-C-C-CTGCC
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 23981  8 -     61129 T-C-C-CTGCC
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5421354  8 -   5703754 T-C-C-CTGCC
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          56595  8 -     80660 T-C-C-CTGCC
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153796  8 -    313613 A-G-C-CTACC
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                          694  8 -     12572 T-C-C-CTGCC
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27544  8 +     39453 T-C-C-CTGCC
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            8062  8 +     27826 T-C-C-CTGCC
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             7584  8 -     19483 T-C-C-CTGCC
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                       885  8 -     12762 T-C-C-CTGCC
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                            746  8 +     13763 T-C-C-CTGCC
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                      881  9 -     30804 TTC-T-ATACT
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               4362  4 +   1910179 -------TACC
i Solenodon_paradoxus.SolPar_flattened_line_126          I 2 C 0
s Sorex_araneus.JH798187.1                                13651610  8 -  18376816 t-c-a-gcCCT
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1954541  9 -   3870691 T-CCC-TTATC
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             31335  8 +     97271 T-C-A-CCATC
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              18942  8 -    196729 T-T-C-CCACC
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6811427  8 +  69701581 T-C-C-CCACT
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                11421  6 +     41958 ----C-CCACC
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73236  8 +    116680 T-C-T-TCACC
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      119390  8 -    156842 t-t-c-ccgct
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387846  8 +    539355 t-t-c-ccgct
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Theropithecus_gelada.CM009954.1                        186429231  8 + 186847797 T-C-C-CTGCC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   6992  8 +      8208 T-C-C-TCACC
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81813  8 +    610378 T-C-C-CCACC
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         11635  8 -     20410 T-C-C-CTGCC
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                       749  8 -     12674 T-C-C-CTGCC
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       11736  8 +     19930 T-C-C-CTGCC
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       8147  8 -     19997 T-C-C-CTGCC
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48286  8 -     60166 T-C-C-CTGCC
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        15758  8 -     27529 T-C-C-CTGCC
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     15702  8 -     18194 T-C-C-CTGCC
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9414  8 -     21137 T-C-C-CTGCC
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    8117  8 -     10723 T-C-C-CTGCC
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7289  8 +      9834 T-C-C-CTGCC
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        25602  8 +     32220 T-C-C-CTGCC
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5939704  8 +   6242583 T-C-C-CTGCC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        8955  8 +     20839 T-C-C-CTGCC
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4293855  8 +  10818551 C-C-C-CCACC
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2156410  8 +   4065304 T-C-C-CTACC
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9853  8 -     10553 T-C-C-CTACC
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   53907  8 -     77625 A-G-C-CTACC
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4851051  8 -   5085361 T-G-A-CCACC
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  12018  8 +     50397 G-C-C-CTGCC
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             12077  8 +     24756 G-C-C-CTGCC
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 11402  8 -     43706 T-C-A-ACACC
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          1662  9 +    224448 T-TCC-CTATC
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      15507  9 +     63895 TTC-T-CTACC
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Echinops_telfairi.JH980293.1                            48781187  0 + 111700974 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vicugna_pacos.KN270157.1                                 5372411  6 -   5488506 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              106005  1 +    114563 I
e Tarsius_wallacei.k141_254427                                1877  3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080  3 +     70052 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660  0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     28700  1 -     29689 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  747560  1 +  11899542 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     71819  1 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Microgale_talazaci.MicTal_scaffold_6613                    22893  0 -    145209 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50964  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18978  0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      83689  1 +    135385 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604  0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20662791  1 +  22651954 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Fukomys_damarensis.KN121974.1                             851033  1 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    36986  1 +     67921 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  36504  1 +     51376 I
e Chinchilla_lanigera.JH722012.1                           1253507  1 +   2543920 I
e Cephalopachus_bancanus.k141_1423433                         6085  3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Carlito_syrichta.NW_007259797.1                           156587  3 -    496798 I
e Capromys_pilorides.CapPil_scaffold_65020                    1632  1 -     12242 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Camelus_ferus.KB017975.1                                  403651  6 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2335354  6 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10002878  6 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       7442 5 +     62944 T-CA-A-G
s Acinonyx_jubatus.LLWD01001279.1                           827926 5 -   1699592 T-CA-C-A
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 1
s Acomys_cahirinus.AcoCah_scaffold_12655                     71401 2 +     87051 T-C-----
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 2
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511199 5 -  29979442 T-CA-C-A
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 1
s Ailurus_fulgens.LNAC01001112.1                             79933 5 -    347723 T-CA-C-A
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 1
s Allactaga_bullata.AllBul_scaffold_9566                     75104 2 -     89534 C-C-----
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 3
s Allenopithecus_nigroviridis.k141_3361533                   15370 5 -     52922 T-CA-A-G
i Allenopithecus_nigroviridis.k141_3361533               C 0 I 1
s Allochrocebus_lhoesti.k141_4309873                         15286 5 -     28001 T-CA-A-G
i Allochrocebus_lhoesti.k141_4309873                     C 0 I 1
s Allochrocebus_preussi.k141_1442296                          5784 5 -     18505 T-CA-A-G
i Allochrocebus_preussi.k141_1442296                     C 0 I 1
s Allochrocebus_solatus.k141_166128                           6636 5 -     12518 T-CA-A-G
i Allochrocebus_solatus.k141_166128                      C 0 I 1
s Alouatta_belzebul.k141_3560514                              8219 5 +     51355 T-CA-A-G
i Alouatta_belzebul.k141_3560514                         C 0 I 2
s Alouatta_caraya.k141_1701091                                1328 5 -     36483 T-CA-A-G
i Alouatta_caraya.k141_1701091                           C 0 I 2
s Alouatta_discolor.k141_566626                              11777 5 +     28687 T-CA-A-G
i Alouatta_discolor.k141_566626                          C 0 I 2
s Alouatta_juara.k141_1302312                                  293 5 +     27940 T-CA-A-G
i Alouatta_juara.k141_1302312                            C 0 I 2
s Alouatta_macconnelli.k141_918386                            1337 5 -      9457 T-CA-A-G
i Alouatta_macconnelli.k141_918386                       C 0 I 2
s Alouatta_nigerrima.k141_1929159                              293 5 +     30492 T-CA-A-G
i Alouatta_nigerrima.k141_1929159                        C 0 I 2
s Alouatta_palliata.k141_2135620                              4288 5 +     47717 T-CA-A-G
i Alouatta_palliata.k141_2135620                         C 0 I 2
s Alouatta_puruensis.k141_362188                              1020 5 +      5663 T-CA-A-G
i Alouatta_puruensis.k141_362188                         C 0 I 2
s Alouatta_seniculus.k141_117119                             15472 5 +     50774 T-CA-A-G
i Alouatta_seniculus.k141_117119                         C 0 I 2
s Anoura_caudifer.AnoCau_scaffold_1412                      185971 5 +    412891 T-CT-A-G
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 1
s Aotus_azarae.k141_3104676                                  16455 5 -     33861 T-CA-A-G
i Aotus_azarae.k141_3104676                              C 0 I 2
s Aotus_griseimembra.k141_2240599                            16452 5 -     34016 T-CA-A-G
i Aotus_griseimembra.k141_2240599                        C 0 I 2
s Aotus_nancymaae.KZ198451.1                               4298879 5 -   5030052 T-CA-A-G
i Aotus_nancymaae.KZ198451.1                             C 0 I 2
s Aotus_trivirgatus.k141_2152450                             16488 5 -     34685 T-CA-A-G
i Aotus_trivirgatus.k141_2152450                         C 0 I 2
s Aotus_vociferans.k141_344750                               29613 5 -     47192 T-CA-A-G
i Aotus_vociferans.k141_344750                           C 0 I 2
s Aplodontia_rufa.AprRuf_scaffold_68852                      13216 5 +     20879 T-TA-A-C
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 1
s Arctocebus_calabarensis.k141_2318572                       12055 5 +     14667 T-CA-A-A
i Arctocebus_calabarensis.k141_2318572                   C 0 I 1
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5361 5 +     43469 T-CT-C-G
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 1
s Avahi_laniger.k141_765380                                  54303 5 -     92717 T-CG-A-G
i Avahi_laniger.k141_765380                              C 0 I 1
s Avahi_peyrierasi.k141_1424874                              54934 5 +     85213 T-CG-A-G
i Avahi_peyrierasi.k141_1424874                          C 0 I 1
s Callibella_humilis.k141_1278103                             6339 5 -     10423 T-CA-A-G
i Callibella_humilis.k141_1278103                        C 0 I 2
s Callimico_goeldii.k141_1091182                             25730 5 +     31915 C-CC-A-C
i Callimico_goeldii.k141_1091182                         C 0 N 0
s Callithrix_geoffroyi.k119_69176                              178 5 +      5377 T-CA-A-G
i Callithrix_geoffroyi.k119_69176                        C 0 I 2
s Callithrix_jacchus.pat_scaffold_3                       23592039 5 - 189096842 T-CA-A-G
i Callithrix_jacchus.pat_scaffold_3                      C 0 I 2
s Callithrix_kuhlii.k119_1168854                               853 5 -     12329 T-CA-A-G
i Callithrix_kuhlii.k119_1168854                         C 0 I 2
s CanFam4.chr16                                           17799788 5 -  60362399 T-CA-C-A
i CanFam4.chr16                                          C 0 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_27089                      536 5 -     43241 T-CA-C-A
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 I 1
s Canis_lupus_dingo.QKWQ01000480.1                         9035231 5 -   9314153 T-CA-C-A
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 1
s Canis_lupus_familiaris.chr16                            17959707 5 -  59632846 T-CA-C-A
i Canis_lupus_familiaris.chr16                           C 0 I 1
s Canis_lupus_orion.HG994398.1                            18501004 5 +  63665305 T-CA-C-A
i Canis_lupus_orion.HG994398.1                           C 0 I 1
s Carollia_perspicillata.CarPer_scaffold_92756                5726 5 -     11696 T-CC-A-G
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 1
s Castor_canadensis.CasCan_scaffold_2074                    137711 5 +    179628 T-CG-T-C
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 1
s Catagonus_wagneri.CatWag_scaffold_2839                     93688 5 +    217609 t-ct-g-g
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 1
s Cebuella_niveiventris.k141_1251222                         10779 5 -     11392 T-CA-A-G
i Cebuella_niveiventris.k141_1251222                     C 0 I 2
s Cebuella_pygmaea.k141_1309012                               6963 5 -      7577 T-CA-A-A
i Cebuella_pygmaea.k141_1309012                          C 0 I 2
s Cebus_albifrons.Contig27                                25653408 5 +  26074798 T-CA-A-G
i Cebus_albifrons.Contig27                               C 0 I 2
s Cebus_olivaceus.k141_1764483                                1346 5 +     28840 T-CA-A-G
i Cebus_olivaceus.k141_1764483                           C 0 I 2
s Cebus_unicolor.k141_1837183                                 1071 5 +     14051 T-CA-A-G
i Cebus_unicolor.k141_1837183                            C 0 I 2
s Ceratotherium_simum.JH767749.1                          12232070 5 +  27778364 t-ca-a-g
i Ceratotherium_simum.JH767749.1                         C 0 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3097 5 -     25243 t-ca-a-g
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 I 1
s Cercocebus_atys.KQ010504.1                               4476301 5 +   4669795 T-CA-A-G
i Cercocebus_atys.KQ010504.1                             C 0 I 1
s Cercocebus_chrysogaster.k141_1540778                         803 5 +     17872 T-CA-A-G
i Cercocebus_chrysogaster.k141_1540778                   C 0 I 1
s Cercocebus_lunulatus.k141_3342297                           1460 5 -     14043 T-CA-A-G
i Cercocebus_lunulatus.k141_3342297                      C 0 I 1
s Cercocebus_torquatus.k141_3057011                           9493 5 +     27781 T-CA-A-G
i Cercocebus_torquatus.k141_3057011                      C 0 I 1
s Cercopithecus_ascanius.k141_1024104                         9661 5 -     20310 T-CA-A-G
i Cercopithecus_ascanius.k141_1024104                    C 0 I 1
s Cercopithecus_cephus.k141_1078548                          12641 5 +     29689 T-CA-A-G
i Cercopithecus_cephus.k141_1078548                      C 0 I 1
s Cercopithecus_diana.k141_1150327                            7391 5 -     20078 T-CA-A-G
i Cercopithecus_diana.k141_1150327                       C 0 I 1
s Cercopithecus_hamlyni.k141_187466                          15309 5 -     27936 T-CA-A-G
i Cercopithecus_hamlyni.k141_187466                      C 0 I 1
s Cercopithecus_lowei.k141_1854285                            4179 5 -     17152 T-CA-A-G
i Cercopithecus_lowei.k141_1854285                       C 0 I 1
s Cercopithecus_albogularis.ctg5                                38817720 5 +  39242232 T-CA-A-G
i Cercopithecus_albogularis.ctg5                               C 0 I 1
s Cercopithecus_mona.ctg39                                21223409 5 -  21565898 T-CA-A-G
i Cercopithecus_mona.ctg39                               C 0 I 1
s Cercopithecus_neglectus.k141_2526306                       40528 5 -     53127 T-CA-A-G
i Cercopithecus_neglectus.k141_2526306                   C 0 I 1
s Cercopithecus_nictitans.k141_1119862                         779 5 +     13442 T-CA-A-G
i Cercopithecus_nictitans.k141_1119862                   C 0 I 1
s Cercopithecus_petaurista.k141_807961                       15328 5 -     27947 T-CA-A-G
i Cercopithecus_petaurista.k141_807961                   C 0 I 1
s Cercopithecus_pogonias.k141_822820                         15304 5 +     17596 T-CA-A-G
i Cercopithecus_pogonias.k141_822820                     C 0 I 1
s Cercopithecus_roloway.k141_2581234                          1351 5 +     14005 T-CA-A-G
i Cercopithecus_roloway.k141_2581234                     C 0 I 1
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1110 5 -      8501 T-CA-A-C
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 I 1
s Cheirogaleus_major.k141_333249                             21681 5 -     52598 T-CA-A-G
i Cheirogaleus_major.k141_333249                         C 0 I 1
s Cheirogaleus_medius.k141_1055463                           17048 5 +     57038 T-CA-A-G
i Cheirogaleus_medius.k141_1055463                       C 0 I 1
s Chiropotes_albinasus.k141_2206961                           1649 2 -     15524 t-c-----
i Chiropotes_albinasus.k141_2206961                      C 0 I 303
s Chlorocebus_aethiops.ctg25                              18429288 5 -  18827391 T-CA-A-G
i Chlorocebus_aethiops.ctg25                             C 0 I 1
s Chlorocebus_pygerythrus.k141_1025673                       15725 5 -     50209 T-CA-A-G
i Chlorocebus_pygerythrus.k141_1025673                   C 0 I 1
s Chlorocebus_sabaeus.CM001947.1                         135422725 5 + 135778131 T-CA-A-G
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 1
s Choloepus_didactylus.ChoDid_scaffold_45914                 18932 5 +     19366 C-CA-A-G
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 I 1
s Choloepus_hoffmanni.KN194906.1                            174009 5 +    839153 C-CA-A-G
i Choloepus_hoffmanni.KN194906.1                         C 0 I 1
s Colobus_angolensis.KN981557.1                            1911202 5 +   2368649 T-CA-A-G
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949454 5 + 200372422 T-CA-A-G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37736 5 +     84244 T-CA-A-G
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17548660 5 -  53390261 A-CA-A-A
i Condylura_cristata.JH655891.1                          C 0 I 1
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          15027 5 -     20389 T-CA-A-G
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 I 1
s Cricetomys_gambianus.CriGam_scaffold_18520                 50635 5 +     63868 T-CA-G-A
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 1
s Cricetulus_griseus.LT883664.1                           11668154 5 + 224834208 T-CA-A-G
i Cricetulus_griseus.LT883664.1                          C 0 I 1
s Crocidura_indochinensis.CroInd_scaffold_37019               3585 5 -     19598 T-CA-A-G
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29111 5 -     87169 T-CA-C-G
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 1
s Ctenodactylus_gundi.CteGun_scaffold_65                    837696 6 +   1526836 TTCA-G-C
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            64132 5 +   2246927 T-CA-A-G
i Dasypus_novemcinctus.JH564415.1                        C 0 I 1
s Daubentonia_madagascariensis.ctg71                      12537884 5 -  12879189 t-cg-a-g
i Daubentonia_madagascariensis.ctg71                     C 0 I 1
s Desmodus_rotundus.KZ672289.1                             8630742 5 +  20541912 T-CG-A-G
i Desmodus_rotundus.KZ672289.1                           C 0 I 1
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673919 5 +   1390856 t-ca-a-g
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 1
s Diceros_bicornis.DicBicMic_scaffold_5955                    6670 5 +    198055 t-ca-a-g
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 1
s Echinops_telfairi.JH980293.1                            48781187 4 + 111700974 --TG-C-A
i Echinops_telfairi.JH980293.1                           C 0 I 1
s Eidolon_helvum.KE759718.1                                  11140 5 +     11740 T-CA-A-A
i Eidolon_helvum.KE759718.1                              C 0 I 1
s Elephantulus_edwardii.JH947257.1                         1098342 5 +  10337057 T-GA-A-A
i Elephantulus_edwardii.JH947257.1                       C 0 I 1
s Ellobius_lutescens.LOEQ01008920.1                          21105 5 -    110024 T-CA-A-G
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 1
s Ellobius_talpinus.LOJH01081419.1                            1009 5 +      8657 T-CA-A-G
i Ellobius_talpinus.LOJH01081419.1                       C 0 I 1
s Enhydra_lutris.KZ291758.1                               16329928 5 -  41312741 T-CA-C-A
i Enhydra_lutris.KZ291758.1                              C 0 I 1
s Eptesicus_fuscus.JH977646.1                              2146346 5 -  14770903 T-CG-A-G
i Eptesicus_fuscus.JH977646.1                            C 0 I 1
s Equus_asinus.JREZ01000139.1                              1284178 5 +   4378816 t-ca-a-g
i Equus_asinus.JREZ01000139.1                            C 0 I 1
s Equus_caballus.CM000403.2                               18531998 5 -  39960074 t-ca-a-g
i Equus_caballus.CM000403.2                              C 0 I 1
s Equus_przewalskii.KK951119.1                               34027 5 +    498745 t-ca-a-g
i Equus_przewalskii.KK951119.1                           C 0 I 1
s Erinaceus_europaeus.JH835339.1                           3328866 5 -   7059049 T-CA-A-T
i Erinaceus_europaeus.JH835339.1                         C 0 I 1
s Erythrocebus_patas.Contig38                             21205893 5 -  21539334 T-CA-A-G
i Erythrocebus_patas.Contig38                            C 0 I 1
s Eulemur_albifrons.k141_576796                              40728 5 -     44621 T-CA-A-G
i Eulemur_albifrons.k141_576796                          C 0 I 1
s Eulemur_collaris.k141_377015                                7109 5 -     16928 T-CA-A-G
i Eulemur_collaris.k141_377015                           C 0 I 1
s Eulemur_coronatus.k141_885031                              16141 5 -     25546 T-CA-A-G
i Eulemur_coronatus.k141_885031                          C 0 I 1
s Eulemur_flavifrons.k141_1184614                            13337 5 +     26330 T-CA-A-G
i Eulemur_flavifrons.k141_1184614                        C 0 I 1
s Eulemur_fulvus.k141_544389                                 14572 5 +     23973 T-CA-A-G
i Eulemur_fulvus.k141_544389                             C 0 I 1
s Eulemur_macaco.k141_1562045                                13334 5 +     75513 t-ca-a-g
i Eulemur_macaco.k141_1562045                            C 0 I 1
s Eulemur_mongoz.k141_232305                                 11264 5 +     97555 t-ca-a-g
i Eulemur_mongoz.k141_232305                             C 0 I 1
s Eulemur_rubriventer.k141_774594                              756 5 +     13026 t-ca-a-g
i Eulemur_rubriventer.k141_774594                        C 0 I 1
s Eulemur_rufus.k141_1476633                                  4808 5 -     17153 T-CA-A-G
i Eulemur_rufus.k141_1476633                             C 0 I 1
s Eulemur_sanfordi.k141_1122526                              14381 5 +    111500 t-ca-a-g
i Eulemur_sanfordi.k141_1122526                          C 0 I 1
s Felis_catus.CM001381.2                                  20237568 5 + 206538554 T-CA-C-A
i Felis_catus.CM001381.2                                 C 0 I 1
s Felis_catus_fca126.CM031415.1                           20196411 5 + 205367284 T-CA-C-A
i Felis_catus_fca126.CM031415.1                          C 0 I 1
s Felis_nigripes.FelNig_flattened_line_20823                 10164 5 -     36744 T-CA-C-A
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 1
s Galago_moholi.ctg2040                                     427204 5 -    453645 T-CA-C-A
i Galago_moholi.ctg2040                                  C 0 I 1
s Galago_senegalensis.k141_631886                             4894 5 +     11339 T-CA-C-A
i Galago_senegalensis.k141_631886                        C 0 I 1
s Galagoides_demidoff.k141_1711393                            2192 5 +     41679 T-CA-A-A
i Galagoides_demidoff.k141_1711393                       C 0 I 1
s Galeopterus_variegatus.GalVar_scaffold_108840               1818 5 -      9135 A-CA-G-G
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 I 1
s Glis_glis.GliGli_scaffold_19807                            31984 5 +     49224 T-CA-A-C
i Glis_glis.GliGli_scaffold_19807                        C 0 I 1
s Gorilla_beringei.k141_3596273                              16697 5 -     32273 T-CA-A-G
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186338833 5 + 186649187 T-CA-A-G
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33232 5 +     78134 T-CT-A-C
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 1
s Hapalemur_alaotrensis.k141_170648                           7436 5 -     19426 T-CA-A-G
i Hapalemur_alaotrensis.k141_170648                      C 0 I 1
s Hapalemur_gilberti.k141_488810                             12589 5 -     15286 T-CA-A-G
i Hapalemur_gilberti.k141_488810                         C 0 I 1
s Hapalemur_griseus.k141_1511508                             14228 5 +     18253 T-CA-A-G
i Hapalemur_griseus.k141_1511508                         C 0 I 1
s Hapalemur_meridionalis.k141_248335                         14329 5 -     41752 T-CA-A-G
i Hapalemur_meridionalis.k141_248335                     C 0 I 1
s Hapalemur_occidentalis.k141_907772                         14166 5 -     16460 T-CA-A-G
i Hapalemur_occidentalis.k141_907772                     C 0 I 1
s Helogale_parvula.HelPar_flattened_line_2585               242948 5 +    327341 T-CA-C-G
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 1
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1507 5 +      7595 T-CA-A-G
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 I 1
s Hoolock_leuconedys.ctg274                                    435493 5 +    630532 T-CA-A-A
i Hoolock_leuconedys.ctg274                                 C 0 I 1
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45651 5 +     55795 T-CA-C-A
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 1
s Ictidomys_tridecemlineatus.JH393364.1                    7521497 5 -   7955117 T-CA-A-C
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 1
s Indri_indri.k141_3655594                                   23126 5 +     31101 t-ca-a-g
i Indri_indri.k141_3655594                               C 0 I 1
s Jaculus_jaculus.JH725527.1                               8277519 2 -   9596543 C-C-----
i Jaculus_jaculus.JH725527.1                             C 0 I 3
s Lasiurus_borealis.LasBor_scaffold_32767                    16996 5 -     42476 T-CC-A-G
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 1
s Lemur_catta.scaffold_24                                 15524681 5 -  30322482 t-ca-a-g
i Lemur_catta.scaffold_24                                C 0 I 1
s Leontocebus_fuscicollis.k141_1820339                        8617 5 +     64341 T-CA-A-G
i Leontocebus_fuscicollis.k141_1820339                   C 0 I 2
s Leontocebus_illigeri.k141_1304848                            957 5 -     35062 T-CA-A-G
i Leontocebus_illigeri.k141_1304848                      C 0 I 2
s Leontocebus_nigricollis.k141_4610752                        8644 5 +     35603 T-CA-A-G
i Leontocebus_nigricollis.k141_4610752                   C 0 I 2
s Leontopithecus_chrysomelas.k141_1519602                    30257 5 +     38576 T-CA-A-G
i Leontopithecus_chrysomelas.k141_1519602                C 0 I 2
s Leontopithecus_rosalia.k141_464620                         26961 5 +     66356 T-CA-A-G
i Leontopithecus_rosalia.k141_464620                     C 0 I 2
s Lepilemur_ankaranensis.k141_596936                         11571 5 -     23766 T-CA-A-G
i Lepilemur_ankaranensis.k141_596936                     C 0 I 1
s Lepilemur_dorsalis.k141_577674                             29632 5 +     45836 T-CA-A-G
i Lepilemur_dorsalis.k141_577674                         C 0 I 1
s Lepilemur_ruficaudatus.k141_121139                          2170 5 +     25010 T-CA-A-G
i Lepilemur_ruficaudatus.k141_121139                     C 0 I 1
s Lepilemur_septentrionalis.k141_185316                      27564 5 +     54090 T-CA-A-G
i Lepilemur_septentrionalis.k141_185316                  C 0 I 1
s Leptonychotes_weddellii.KB714746.1                       3043670 5 +   3914936 T-CA-T-A
i Leptonychotes_weddellii.KB714746.1                     C 0 I 1
s Lepus_americanus.LepAme_scaffold_107385                     7100 5 -     14121 T-CA-T-G
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 1
s Lophocebus_aterrimus.ctg367                              1437844 5 +   1826925 T-CA-A-G
i Lophocebus_aterrimus.ctg367                            C 0 I 1
s Loris_lydekkerianus.k141_2539221                            6452 5 +     11245 T-TA-A-A
i Loris_lydekkerianus.k141_2539221                       C 0 I 1
s Loris_tardigradus.ctg83                                  1005273 5 +   6120653 T-TA-A-A
i Loris_tardigradus.ctg83                                C 0 I 1
s Loxodonta_africana.GL010049.1                            4217944 6 -  43346337 T-CA-ACG
i Loxodonta_africana.GL010049.1                          C 0 I 1
s Lycaon_pictus.CM007581.1                                17955947 5 -  59628241 T-CA-C-A
i Lycaon_pictus.CM007581.1                               C 0 I 1
s Macaca_arctoides.k141_2326796                               7659 5 +     40492 T-CA-A-G
i Macaca_arctoides.k141_2326796                          C 0 I 1
s Macaca_assamensis.Contig5                               59676918 5 +  60120075 T-CA-A-G
i Macaca_assamensis.Contig5                              C 0 I 1
s Macaca_cyclopis.k119_18836                                 13434 5 -     26193 T-CA-A-G
i Macaca_cyclopis.k119_18836                             C 0 I 1
s Macaca_fascicularis.k141_814140                            81218 5 -    114318 T-CA-A-G
i Macaca_fascicularis.k141_814140                        C 0 I 1
s Macaca_fuscata.k119_255327                                  6905 5 -     23192 T-CA-A-G
i Macaca_fuscata.k119_255327                             C 0 I 1
s Macaca_leonina.k141_3550399                                16378 5 -     29190 T-CA-A-G
i Macaca_leonina.k141_3550399                            C 0 I 1
s Macaca_maura.k141_2733130                                  24943 5 +     37952 T-CA-A-G
i Macaca_maura.k141_2733130                              C 0 I 1
s Macaca_mulatta.NC_041758.1                             186840032 5 + 187317192 T-CA-A-G
i Macaca_mulatta.NC_041758.1                             C 0 I 1
s Macaca_nemestrina.KQ007038.1                            25458595 5 -  25927173 T-CA-A-G
i Macaca_nemestrina.KQ007038.1                           C 0 I 1
s Macaca_nigra.k141_1655396                                  80791 5 +     89720 T-CA-A-G
i Macaca_nigra.k141_1655396                              C 0 I 1
s Macaca_radiata.k141_3680011                                 7792 5 +     20474 T-CA-A-G
i Macaca_radiata.k141_3680011                            C 0 I 1
s Macaca_siberu.k141_635500                                   7592 5 -     14993 T-CA-A-G
i Macaca_siberu.k141_635500                              C 0 I 1
s Macaca_silenus.Contig273                                  330458 5 -    668171 T-CA-A-G
i Macaca_silenus.Contig273                               C 0 I 1
s Macaca_thibetana.k99_256239                                 5905 5 -     24072 T-CA-A-G
i Macaca_thibetana.k99_256239                            C 0 I 1
s Macaca_tonkeana.k141_1498238                               26530 5 -     45290 T-CA-A-G
i Macaca_tonkeana.k141_1498238                           C 0 I 1
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91234 5 +     94391 a-ca-a-g
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 1
s Mandrillus_leucophaeus.scaffold280                      23938121 5 -  24302211 T-CA-A-G
i Mandrillus_leucophaeus.scaffold280                     C 0 I 1
s Mandrillus_sphinx.Contig270                               352243 5 +    752769 T-CA-A-G
i Mandrillus_sphinx.Contig270                            C 0 I 1
s Marmota_marmota.CZRN01000018.1                          33103694 5 -  40650429 T-CA-A-C
i Marmota_marmota.CZRN01000018.1                         C 0 I 1
s Megaderma_lyra.MegLyr_scaffold_4542                        11058 5 -    207569 T-CC-A-G
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 1
s Mellivora_capensis.MelCap_flattened_line_69365             10663 5 +     13704 T-CA-C-A
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 1
s Meriones_unguiculatus.MerUng_scaffold_7390                 33346 5 +    140813 T-CA-A-G
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 1
s Mesocricetus_auratus.KB708134.1                         12182810 5 -  29670104 T-CA-A-G
i Mesocricetus_auratus.KB708134.1                        C 0 I 1
s Mico_argentatus.k141_1239457                                6775 5 -      7380 T-CA-A-G
i Mico_argentatus.k141_1239457                           C 0 I 2
s Mico_schneideri.k141_1950671                                      6748 5 -      7356 T-CA-A-G
i Mico_schneideri.k141_1950671                                 C 0 I 2
s Microcebus_murinus.CM007674.1                           18292107 5 -  93316391 T-CA-A-G
i Microcebus_murinus.CM007674.1                          C 0 I 1
s Microgale_talazaci.MicTal_scaffold_6613                    22893 4 -    145209 --CA-C-C
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 1
s Micronycteris_hirsuta.MicHir_scaffold_52381                16266 5 -     19307 T-CT-A-G
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 1
s Microtus_ochrogaster.CM001695.1                         11261058 5 -  27267610 T-CA-A-G
i Microtus_ochrogaster.CM001695.1                        C 0 I 1
s Miniopterus_natalensis.LDJU01000034.1                    1851222 5 +   8254450 C-AC-A-A
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 1
s Miniopterus_schreibersii.MinSch_scaffold_18080             34902 5 +     64694 C-GC-A-A
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 1
s Miopithecus_ogouensis.k141_534055                           9827 5 -     28506 T-CA-A-G
i Miopithecus_ogouensis.k141_534055                      C 0 I 1
s Mirounga_angustirostris.MirAng_flattened_line_93702         6538 5 -      8324 T-CA-T-A
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 1
s Mirza_zaza.k141_952172                                      9651 5 -     37649 T-CA-A-G
i Mirza_zaza.k141_952172                                 C 0 I 1
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142264 5 -    366855 T-CT-C-G
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 1
s Mungos_mungo.MunMun_flattened_line_23663                   36047 5 +     37127 T-CA-C-A
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 1
s Murina_feae.MurFea_scaffold_85699                           7452 3 +     14753 ---A-A-G
i Murina_feae.MurFea_scaffold_85699                      C 0 I 1
s Mus_caroli.LT608237.1                                   84361961 5 - 120012414 T-CA-A-G
i Mus_caroli.LT608237.1                                  C 0 I 1
s Mus_musculus.chr8                                       87650954 5 - 129401213 T-CA-A-G
i Mus_musculus.chr8                                      C 0 I 1
s Mus_pahari.LT608297.1                                   31355611 5 -  89631738 T-CA-A-G
i Mus_pahari.LT608297.1                                  C 0 I 1
s Mus_spretus.CM004101.1                                  90753017 5 - 130317789 T-CA-A-G
i Mus_spretus.CM004101.1                                 C 0 I 1
s Mustela_putorius.JH418006.1                               302075 5 -  14710649 T-CA-C-A
i Mustela_putorius.JH418006.1                            C 0 I 1
s Myotis_brandtii.KE162005.1                                281085 5 -  10118263 T-CA-A-G
i Myotis_brandtii.KE162005.1                             C 0 I 1
s Myotis_davidii.KB100139.1                                1588341 5 -   6019432 T-CA-A-G
i Myotis_davidii.KB100139.1                              C 0 I 1
s Myotis_lucifugus.GL429869.1                              3904437 5 -   4330536 T-CA-A-G
i Myotis_lucifugus.GL429869.1                            C 0 I 1
s Myotis_myotis.MyoMyo_scaffold_281845                         588 5 +      1835 T-CA-A-G
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 I 1
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189885 5 +    196477 T-CA-C-G
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 I 1
s Nannospalax_galili.KL204047.1                            2034665 5 -   3037898 C-CA-A-G
i Nannospalax_galili.KL204047.1                          C 0 I 1
s Nasalis_larvatus.k141_413338                               15829 5 +     21681 T-CA-A-G
i Nasalis_larvatus.k141_413338                           C 0 I 1
s Neomonachus_schauinslandi.NINY01007730.1                20308124 5 +  31847680 T-CA-T-A
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 1
s Noctilio_leporinus.NocLep_scaffold_251                    758499 5 +    783361 C-CA-A-G
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 1
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150010 5 -   9404916 T-CA-C-A
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 1
s Nycticebus_bengalensis.LG01                            102586817 5 - 196305487 T-TA-A-A
i Nycticebus_bengalensis.LG01                            C 0 I 1
s Nycticebus_coucang.k141_1127096                              741 5 +      2075 T-TA-A-A
i Nycticebus_coucang.k141_1127096                        C 0 I 1
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105762172 5 + 199412804 T-TA-A-A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 1
s Ochotona_princeps.JH802162.1                             1364473 5 +   3988456 T-CA-T-G
i Ochotona_princeps.JH802162.1                           C 0 I 1
s Odobenus_rosmarus.KB229312.1                              507266 5 -   2017862 T-CA-T-A
i Odobenus_rosmarus.KB229312.1                           C 0 I 1
s Ondatra_zibethicus.OndZib_scaffold_46174                   25736 5 +     28053 T-CA-A-G
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 1
s Onychomys_torridus.OnyTor_scaffold_2986                    80738 5 +    102263 T-CA-A-G
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 1
s Orycteropus_afer.OryAfe_flattened_line_144387              10725 5 -     18566 T-TG-A-G
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 I 1
s Oryctolagus_cuniculus.CM000791.1                        67147960 5 + 174332312 T-CA-T-G
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 1
s Otocyon_megalotis.JAEUCK010005147.1                       462959 5 -    559221 T-CA-C-A
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 1
s Otolemur_crassicaudatus.k141_222918                         4724 5 +      8798 T-CA-A-A
i Otolemur_crassicaudatus.k141_222918                    C 0 I 1
s Otolemur_garnettii.GL873799.1                             696887 5 -   1103335 T-CA-A-A
i Otolemur_garnettii.GL873799.1                          C 0 I 1
s Pan_paniscus.KQ411613.1                                    44785 5 +     80009 T-CA-A-G
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189143685 5 + 189151597 T-CA-A-G
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  151774 5 +    230217 T-CA-C-A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 1
s Panthera_pardus.KV860321.1                                264983 5 +  18783137 T-CA-C-A
i Panthera_pardus.KV860321.1                             C 0 I 1
s Panthera_tigris.KE722367.1                               4721862 5 -   8748460 T-CA-C-A
i Panthera_tigris.KE722367.1                             C 0 I 1
s Papio_anubis.CM001495.2                                183443921 5 + 183742232 T-CA-A-G
i Papio_anubis.CM001495.2                                C 0 I 1
s Papio_cynocephalus.k141_4307930                             7567 5 +     20448 T-CA-A-G
i Papio_cynocephalus.k141_4307930                        C 0 I 1
s Papio_hamadryas.Contig39                                20564379 5 +  20919399 T-CA-A-G
i Papio_hamadryas.Contig39                               C 0 I 1
s Papio_kindae.k141_1936966                                   6311 5 +     41871 T-CA-A-G
i Papio_kindae.k141_1936966                              C 0 I 1
s Papio_papio.k141_802527                                     9604 5 +     27711 T-CA-A-G
i Papio_papio.k141_802527                                C 0 I 1
s Papio_ursinus.k141_5274964                                   601 5 -     11374 T-CA-A-G
i Papio_ursinus.k141_5274964                             C 0 I 1
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13271 5 -     78924 T-CA-T-G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 1
s Perodicticus_ibeanus.k141_855320                           10711 5 +     13100 T-CA-A-A
i Perodicticus_ibeanus.k141_855320                       C 0 I 1
s Perodicticus_potto.k141_1092580                             9105 5 +     25941 T-CA-A-A
i Perodicticus_potto.k141_1092580                        C 0 I 1
s Peromyscus_maniculatus.KI615324.1                       18195361 5 -  18517816 T-CA-A-G
i Peromyscus_maniculatus.KI615324.1                      C 0 I 1
s Piliocolobus_badius.k141_1234363                           44320 5 +     62158 T-CA-A-G
i Piliocolobus_badius.k141_1234363                       C 0 I 1
s Piliocolobus_gordonorum.k141_381342                        39067 5 +     89929 T-CA-A-G
i Piliocolobus_gordonorum.k141_381342                    C 0 I 1
s Piliocolobus_kirkii.k141_448987                            40483 5 +     51399 T-CA-A-G
i Piliocolobus_kirkii.k141_448987                        C 0 I 1
s Piliocolobus_tephrosceles.PDMG02000141.1                14296721 5 -  14605196 T-CA-A-G
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 1
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2387 5 +     22620 T-CA-A-G
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 1
s Pongo_abelii.CM009266.2                                189131824 5 + 189387572 T-CA-A-G
i Pongo_abelii.CM009266.2                                C 0 I 1
s Pongo_pygmaeus.ctg66                                     9571431 5 +   9816681 T-CA-A-G
i Pongo_pygmaeus.ctg66                                   C 0 I 1
s Presbytis_comata.k141_677006                               74004 5 -     81375 T-CA-A-G
i Presbytis_comata.k141_677006                           C 0 I 1
s Presbytis_mitrata.k141_1087752                              5825 5 +     19060 T-CA-A-G
i Presbytis_mitrata.k141_1087752                         C 0 I 1
s Procavia_capensis.ProCapCap_scaffold_85530                 13962 5 -     22811 T-CA-A-G
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 I 1
s Prolemur_simus.MPIZ01000396.1                            2597361 5 -   4620579 T-CA-A-G
i Prolemur_simus.MPIZ01000396.1                          C 0 I 1
s Propithecus_coquerelli.NW_012148875.1                     991347 5 +   2598838 T-CG-A-G
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 1
s Propithecus_coronatus.k141_347390                          29659 5 +     38485 T-CG-A-G
i Propithecus_coronatus.k141_347390                      C 0 I 1
s Propithecus_diadema.k141_58108                              1701 5 -     13098 T-CG-A-G
i Propithecus_diadema.k141_58108                         C 0 I 1
s Propithecus_edwardsi.k141_1176054                          27180 5 +     35766 T-CG-A-G
i Propithecus_edwardsi.k141_1176054                      C 0 I 1
s Propithecus_perrieri.k141_1200571                           5367 5 -     24134 T-CG-A-G
i Propithecus_perrieri.k141_1200571                      C 0 I 1
s Propithecus_tattersalli.k141_790011                        29192 5 -     67325 T-CG-A-G
i Propithecus_tattersalli.k141_790011                    C 0 I 1
s Propithecus_verreauxi.k141_956661                           5415 5 -      6182 T-CG-A-G
i Propithecus_verreauxi.k141_956661                      C 0 I 1
s Psammomys_obesus.NESX01036370.1                            10992 5 -     21651 T-CA-A-G
i Psammomys_obesus.NESX01036370.1                        C 0 I 1
s Pteronotus_parnellii.KE909381.1                            15773 5 -     21811 T-CA-A-G
i Pteronotus_parnellii.KE909381.1                        C 0 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40857 5 +     42204 T-CA-C-A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 1
s Pteropus_alecto.KB030862.1                              22977380 5 +  28871421 t-ca-a-g
i Pteropus_alecto.KB030862.1                             C 0 I 1
s Pteropus_vampyrus.KN534172.1                                7433 5 -      8028 T-CA-A-G
i Pteropus_vampyrus.KN534172.1                           C 0 I 1
s Puma_concolor.QAVW01001104.1                            20274933 5 -  38429054 T-CA-C-A
i Puma_concolor.QAVW01001104.1                           C 0 I 1
s Pygathrix_cinerea.k141_1153803                             15811 5 -     91421 T-CA-A-G
i Pygathrix_cinerea.k141_1153803                         C 0 I 1
s Pygathrix_nigripes_b.ctg100                                 7609931 5 +   7812017 T-CA-A-G
i Pygathrix_nigripes_b.ctg100                               C 0 I 1
s Pygathrix_nigripes_a.k141_215492                             15810 5 -     72585 T-CA-A-G
i Pygathrix_nigripes_a.k141_215492                         C 0 I 1
s Rattus_norvegicus.chr16                                 53571209 5 +  90668790 T-CA-A-G
i Rattus_norvegicus.chr16                                C 0 I 1
s Rhinopithecus_bieti.k119_217274                             7521 5 -     11128 T-CA-A-G
i Rhinopithecus_bieti.k119_217274                        C 0 I 1
s Rhinopithecus_roxellana.NC_044550.1                     91236870 5 - 195417433 T-CA-A-G
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 1
s Rhinopithecus_strykeri.ctg102                            7672526 5 +   7961872 T-CA-A-G
i Rhinopithecus_strykeri.ctg102                          C 0 I 1
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88421 5 -     96226 T-CA-A-G
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 1
s Saguinus_bicolor.k141_8081                                  1932 5 +     42994 T-CA-A-G
i Saguinus_bicolor.k141_8081                             C 0 I 2
s Saguinus_imperator.k141_1496743                              626 5 +      2253 T-CA-A-G
i Saguinus_imperator.k141_1496743                        C 0 I 2
s Saguinus_inustus.k141_3945547                               1054 5 -      8737 T-CA-A-C
i Saguinus_inustus.k141_3945547                          C 0 I 2
s Saguinus_labiatus.k141_4004060                               708 5 +      2343 T-CA-A-G
i Saguinus_labiatus.k141_4004060                         C 0 I 2
s Saguinus_midas.LG03                                    209475586 5 + 209938924 T-CA-A-G
i Saguinus_midas.LG03                                    C 0 I 2
s Saguinus_mystax.k141_374627                                 9289 5 -      9399 T-CA-A-G
i Saguinus_mystax.k141_374627                            C 0 I 2
s Saimiri_boliviensis.NW_024100920.1                     119951656 5 - 121099817 T-CA-A-G
i Saimiri_boliviensis.NW_024100920.1                     C 0 I 2
s Saimiri_cassiquiarensis.k141_2188234                       23998 5 +     46362 T-CA-A-G
i Saimiri_cassiquiarensis.k141_2188234                   C 0 I 2
s Saimiri_macrodon.k141_716185                               24093 5 +     45824 T-CA-A-G
i Saimiri_macrodon.k141_716185                           C 0 I 2
s Saimiri_oerstedii.k141_1487881                             40772 5 -     64574 T-CA-A-G
i Saimiri_oerstedii.k141_1487881                         C 0 I 2
s Saimiri_sciureus.k141_2278166                               3845 5 -     23631 T-CA-A-G
i Saimiri_sciureus.k141_2278166                          C 0 I 2
s Saimiri_ustus.k141_1484609                                 23989 5 -     61129 T-CA-A-G
i Saimiri_ustus.k141_1484609                             C 0 I 2
s Sapajus_apella.ctg103                                    5421362 5 -   5703754 T-CA-A-G
i Sapajus_apella.ctg103                                  C 0 I 2
s Sapajus_macrocephalus.k141_351809                          56603 5 -     80660 T-CA-A-G
i Sapajus_macrocephalus.k141_351809                      C 0 I 2
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153804 5 -    313613 A-CA-A-G
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 1
s Semnopithecus_entellus.k141_1672505                          702 5 -     12572 T-CA-A-G
i Semnopithecus_entellus.k141_1672505                    C 0 I 1
s Semnopithecus_hypoleucos.k141_1615806                      27552 5 +     39453 T-CA-A-G
i Semnopithecus_hypoleucos.k141_1615806                  C 0 I 1
s Semnopithecus_johnii.k141_670120                            8070 5 +     27826 T-CA-A-G
i Semnopithecus_johnii.k141_670120                       C 0 I 1
s Semnopithecus_priam.k141_638794                             7592 5 -     19483 T-CA-A-G
i Semnopithecus_priam.k141_638794                        C 0 I 1
s Semnopithecus_schistaceus.k141_1572284                       893 5 -     12762 T-CA-A-G
i Semnopithecus_schistaceus.k141_1572284                 C 0 I 1
s Semnopithecus_vetulus.k141_910252                            754 5 +     13763 T-CA-A-G
i Semnopithecus_vetulus.k141_910252                      C 0 I 1
s Sigmodon_hispidus.SigHis_scaffold_42075                      890 5 -     30804 T-CA-A-G
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 I 1
s Solenodon_paradoxus.SolPar_flattened_line_126               4366 5 +   1910179 A-CA-A-G
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 1
s Sorex_araneus.JH798187.1                                13651618 5 -  18376816 T-CA-A-G
i Sorex_araneus.JH798187.1                               C 0 I 1
s Spermophilus_dauricus.KZ294078.1                         1954550 5 -   3870691 T-CA-A-C
i Spermophilus_dauricus.KZ294078.1                       C 0 I 1
s Spilogale_gracilis.SpiGra_flattened_line_13525             31343 5 +     97271 T-CA-C-A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 1
s Suricata_suricatta.SurSur_flattened_line_6629              18950 5 -    196729 T-CA-C-G
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 1
s Sus_scrofa.CM000828.4                                    6811435 5 +  69701581 T-CC-G-G
i Sus_scrofa.CM000828.4                                  C 0 I 1
s Tadarida_brasiliensis.TadBra_scaffold_25820                11427 5 +     41958 T-CA-G-G
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 1
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73244 5 +    116680 T-CA-C-G
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 I 1
s Tapirus_indicus.TapInd_scaffold_9301                      119398 5 -    156842 t-ca-a-g
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 1
s Tapirus_terrestris.TapTer_scaffold_755                    387854 5 +    539355 t-ca-a-g
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 1
s Theropithecus_gelada.CM009954.1                        186429239 5 + 186847797 T-CA-A-G
i Theropithecus_gelada.CM009954.1                        C 0 I 1
s Tolypeutes_matacus.TolMat_scaffold_228639                   7000 5 +      8208 C-CA-A-G
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 I 1
s Tonatia_saurophila.TonSau_scaffold_294                     81821 5 +    610378 T-CG-A-G
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 1
s Trachypithecus_auratus.k141_722599                         11643 5 -     20410 T-CA-A-G
i Trachypithecus_auratus.k141_722599                     C 0 I 1
s Trachypithecus_crepusculus.k141_582567                       757 5 -     12674 T-CA-A-G
i Trachypithecus_crepusculus.k141_582567                 C 0 I 1
s Trachypithecus_cristatus.k141_580354                       11744 5 +     19930 T-CA-A-G
i Trachypithecus_cristatus.k141_580354                   C 0 I 1
s Trachypithecus_francoisi.k141_1412647                       8155 5 -     19997 T-CA-A-G
i Trachypithecus_francoisi.k141_1412647                  C 0 I 1
s Trachypithecus_geei.k141_277701                            48294 5 -     60166 T-CA-A-G
i Trachypithecus_geei.k141_277701                        C 0 I 1
s Trachypithecus_germaini.k141_912491                        15766 5 -     27529 T-CA-A-G
i Trachypithecus_germaini.k141_912491                    C 0 I 1
s Trachypithecus_hatinhensis.k141_143409                     15710 5 -     18194 T-CA-A-G
i Trachypithecus_hatinhensis.k141_143409                 C 0 I 1
s Trachypithecus_laotum.k141_907409                           9422 5 -     21137 T-CA-A-G
i Trachypithecus_laotum.k141_907409                      C 0 I 1
s Trachypithecus_leucocephalus.k141_587342                    8125 5 -     10723 T-CA-A-G
i Trachypithecus_leucocephalus.k141_587342               C 0 I 1
s Trachypithecus_melamera.k141_434728                         7297 5 +      9834 T-CA-A-G
i Trachypithecus_melamera.k141_434728                    C 0 I 1
s Trachypithecus_obscurus.k141_190785                        25610 5 +     32220 T-CA-A-G
i Trachypithecus_obscurus.k141_190785                    C 0 I 1
s Trachypithecus_phayrei.ctg124                            5939712 5 +   6242583 T-CA-A-G
i Trachypithecus_phayrei.ctg124                          C 0 I 1
s Trachypithecus_pileatus.k141_2007326                        8963 5 +     20839 T-CA-A-G
i Trachypithecus_pileatus.k141_2007326                   C 0 I 1
s Trichechus_manatus.JH594705.1                            4293863 5 +  10818551 T-CA-A-G
i Trichechus_manatus.JH594705.1                          C 0 I 1
s Tupaia_chinensis.KB320699.1                              2156418 5 +   4065304 T-CA-A-G
i Tupaia_chinensis.KB320699.1                            C 0 I 1
s Tupaia_tana.TupTan_flattened_line_97126                     9861 5 -     10553 T-CA-A-G
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 1
s Uropsilus_gracilis.UroGra_scaffold_12083                   53915 5 -     77625 T-CA-A-G
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 1
s Ursus_maritimus.KK499267.1                               4851059 5 -   5085361 T-CA-C-A
i Ursus_maritimus.KK499267.1                             C 0 I 1
s Varecia_rubra.k141_590885                                  12026 5 +     50397 T-CA-A-G
i Varecia_rubra.k141_590885                              C 0 I 1
s Varecia_variegata.k141_1128296                             12085 5 +     24756 T-CA-A-G
i Varecia_variegata.k141_1128296                         C 0 I 1
s Vulpes_lagopus.VulLag_flattened_line_30954                 11410 5 -     43706 T-CA-C-A
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 1
s Xerus_inauris.XerIna_scaffold_2302                          1671 5 +    224448 T-CA-A-C
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 1
s Zapus_hudsonius.ZapHud_scaffold_11398                      15516 5 +     63895 T-CT-A-C
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 2
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vicugna_pacos.KN270157.1                                 5372411 6 -   5488506 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              106005 1 +    114563 I
e Tarsius_wallacei.k141_254427                                1877 3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080 3 +     70052 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     28700 1 -     29689 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  747560 1 +  11899542 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     71819 1 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50964 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18978 0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hystrix_cristata.HysCri_scaffold_5660                      83689 1 +    135385 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterocephalus_glaber.JH602082.1                        20662791 1 +  22651954 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Fukomys_damarensis.KN121974.1                             851033 1 +   3816255 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    36986 1 +     67921 I
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  36504 1 +     51376 I
e Chinchilla_lanigera.JH722012.1                           1253507 1 +   2543920 I
e Cephalopachus_bancanus.k141_1423433                         6085 3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Carlito_syrichta.NW_007259797.1                           156587 3 -    496798 I
e Capromys_pilorides.CapPil_scaffold_65020                    1632 1 -     12242 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Camelus_ferus.KB017975.1                                  403651 6 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2335354 6 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10002878 6 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       7447 1 +     62944 T
s Acinonyx_jubatus.LLWD01001279.1                           827932 1 -   1699592 T
i Acinonyx_jubatus.LLWD01001279.1                        I 1 I 20
s Acomys_cahirinus.AcoCah_scaffold_12655                     71405 1 +     87051 T
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 2 I 11
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511205 1 -  29979442 T
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 1 I 4
s Ailurus_fulgens.LNAC01001112.1                             79939 1 -    347723 T
i Ailurus_fulgens.LNAC01001112.1                         I 1 I 4
s Allactaga_bullata.AllBul_scaffold_9566                     75109 1 -     89534 T
i Allactaga_bullata.AllBul_scaffold_9566                 I 3 I 13
s Allenopithecus_nigroviridis.k141_3361533                   15376 1 -     52922 T
i Allenopithecus_nigroviridis.k141_3361533               I 1 C 0
s Allochrocebus_lhoesti.k141_4309873                         15292 1 -     28001 T
i Allochrocebus_lhoesti.k141_4309873                     I 1 C 0
s Allochrocebus_preussi.k141_1442296                          5790 1 -     18505 T
i Allochrocebus_preussi.k141_1442296                     I 1 C 0
s Allochrocebus_solatus.k141_166128                           6642 1 -     12518 T
i Allochrocebus_solatus.k141_166128                      I 1 C 0
s Alouatta_belzebul.k141_3560514                              8226 1 +     51355 T
i Alouatta_belzebul.k141_3560514                         I 2 I 4
s Alouatta_caraya.k141_1701091                                1335 1 -     36483 T
i Alouatta_caraya.k141_1701091                           I 2 I 4
s Alouatta_discolor.k141_566626                              11784 1 +     28687 T
i Alouatta_discolor.k141_566626                          I 2 I 4
s Alouatta_juara.k141_1302312                                  300 1 +     27940 T
i Alouatta_juara.k141_1302312                            I 2 I 4
s Alouatta_macconnelli.k141_918386                            1344 1 -      9457 T
i Alouatta_macconnelli.k141_918386                       I 2 I 4
s Alouatta_nigerrima.k141_1929159                              300 1 +     30492 T
i Alouatta_nigerrima.k141_1929159                        I 2 I 4
s Alouatta_palliata.k141_2135620                              4295 1 +     47717 T
i Alouatta_palliata.k141_2135620                         I 2 I 4
s Alouatta_puruensis.k141_362188                              1027 1 +      5663 T
i Alouatta_puruensis.k141_362188                         I 2 I 4
s Alouatta_seniculus.k141_117119                             15479 1 +     50774 T
i Alouatta_seniculus.k141_117119                         I 2 I 4
s Anoura_caudifer.AnoCau_scaffold_1412                      185977 1 +    412891 C
i Anoura_caudifer.AnoCau_scaffold_1412                   I 1 I 19
s Aotus_azarae.k141_3104676                                  16462 1 -     33861 T
i Aotus_azarae.k141_3104676                              I 2 C 0
s Aotus_griseimembra.k141_2240599                            16459 1 -     34016 T
i Aotus_griseimembra.k141_2240599                        I 2 C 0
s Aotus_nancymaae.KZ198451.1                               4298886 1 -   5030052 T
i Aotus_nancymaae.KZ198451.1                             I 2 C 0
s Aotus_trivirgatus.k141_2152450                             16495 1 -     34685 T
i Aotus_trivirgatus.k141_2152450                         I 2 C 0
s Aotus_vociferans.k141_344750                               29620 1 -     47192 T
i Aotus_vociferans.k141_344750                           I 2 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13222 1 +     20879 T
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 1 I 1
s Arctocebus_calabarensis.k141_2318572                       12061 1 +     14667 T
i Arctocebus_calabarensis.k141_2318572                   I 1 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5367 1 +     43469 C
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 1 I 19
s Avahi_laniger.k141_765380                                  54309 1 -     92717 T
i Avahi_laniger.k141_765380                              I 1 C 0
s Avahi_peyrierasi.k141_1424874                              54940 1 +     85213 T
i Avahi_peyrierasi.k141_1424874                          I 1 C 0
s Callibella_humilis.k141_1278103                             6346 1 -     10423 T
i Callibella_humilis.k141_1278103                        I 2 C 0
s Callithrix_geoffroyi.k119_69176                              185 1 +      5377 T
i Callithrix_geoffroyi.k119_69176                        I 2 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592046 1 - 189096842 T
i Callithrix_jacchus.pat_scaffold_3                      I 2 C 0
s Callithrix_kuhlii.k119_1168854                               860 1 -     12329 T
i Callithrix_kuhlii.k119_1168854                         I 2 C 0
s CanFam4.chr16                                           17799794 1 -  60362399 T
i CanFam4.chr16                                          I 1 I 4
s Canis_lupus_VD.CanFam_VD_scaffold_27089                      542 1 -     43241 T
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 1 I 4
s Canis_lupus_dingo.QKWQ01000480.1                         9035237 1 -   9314153 T
i Canis_lupus_dingo.QKWQ01000480.1                       I 1 I 4
s Canis_lupus_familiaris.chr16                            17959713 1 -  59632846 T
i Canis_lupus_familiaris.chr16                           I 1 I 4
s Canis_lupus_orion.HG994398.1                            18501010 1 +  63665305 T
i Canis_lupus_orion.HG994398.1                           I 1 I 4
s Capromys_pilorides.CapPil_scaffold_65020                    1633 1 -     12242 T
i Capromys_pilorides.CapPil_scaffold_65020               I 1 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5732 1 -     11696 C
i Carollia_perspicillata.CarPer_scaffold_92756           I 1 I 21
s Castor_canadensis.CasCan_scaffold_2074                    137717 1 +    179628 T
i Castor_canadensis.CasCan_scaffold_2074                 I 1 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     93694 1 +    217609 t
i Catagonus_wagneri.CatWag_scaffold_2839                 I 1 I 12
s Cebuella_niveiventris.k141_1251222                         10786 1 -     11392 T
i Cebuella_niveiventris.k141_1251222                     I 2 C 0
s Cebuella_pygmaea.k141_1309012                               6970 1 -      7577 T
i Cebuella_pygmaea.k141_1309012                          I 2 C 0
s Cebus_albifrons.Contig27                                25653415 1 +  26074798 G
i Cebus_albifrons.Contig27                               I 2 I 2
s Cebus_olivaceus.k141_1764483                                1353 1 +     28840 G
i Cebus_olivaceus.k141_1764483                           I 2 I 2
s Cebus_unicolor.k141_1837183                                 1078 1 +     14051 G
i Cebus_unicolor.k141_1837183                            I 2 I 2
s Ceratotherium_simum.JH767749.1                          12232076 1 +  27778364 t
i Ceratotherium_simum.JH767749.1                         I 1 I 14
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3103 1 -     25243 t
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 1 I 14
s Cercocebus_atys.KQ010504.1                               4476307 1 +   4669795 T
i Cercocebus_atys.KQ010504.1                             I 1 C 0
s Cercocebus_chrysogaster.k141_1540778                         809 1 +     17872 T
i Cercocebus_chrysogaster.k141_1540778                   I 1 C 0
s Cercocebus_lunulatus.k141_3342297                           1466 1 -     14043 T
i Cercocebus_lunulatus.k141_3342297                      I 1 C 0
s Cercocebus_torquatus.k141_3057011                           9499 1 +     27781 T
i Cercocebus_torquatus.k141_3057011                      I 1 C 0
s Cercopithecus_ascanius.k141_1024104                         9667 1 -     20310 T
i Cercopithecus_ascanius.k141_1024104                    I 1 C 0
s Cercopithecus_cephus.k141_1078548                          12647 1 +     29689 T
i Cercopithecus_cephus.k141_1078548                      I 1 C 0
s Cercopithecus_diana.k141_1150327                            7397 1 -     20078 T
i Cercopithecus_diana.k141_1150327                       I 1 I 10
s Cercopithecus_hamlyni.k141_187466                          15315 1 -     27936 T
i Cercopithecus_hamlyni.k141_187466                      I 1 C 0
s Cercopithecus_lowei.k141_1854285                            4185 1 -     17152 T
i Cercopithecus_lowei.k141_1854285                       I 1 I 10
s Cercopithecus_albogularis.ctg5                                38817726 1 +  39242232 T
i Cercopithecus_albogularis.ctg5                               I 1 C 0
s Cercopithecus_mona.ctg39                                21223415 1 -  21565898 T
i Cercopithecus_mona.ctg39                               I 1 C 0
s Cercopithecus_neglectus.k141_2526306                       40534 1 -     53127 T
i Cercopithecus_neglectus.k141_2526306                   I 1 C 0
s Cercopithecus_nictitans.k141_1119862                         785 1 +     13442 T
i Cercopithecus_nictitans.k141_1119862                   I 1 C 0
s Cercopithecus_petaurista.k141_807961                       15334 1 -     27947 T
i Cercopithecus_petaurista.k141_807961                   I 1 C 0
s Cercopithecus_pogonias.k141_822820                         15310 1 +     17596 T
i Cercopithecus_pogonias.k141_822820                     I 1 C 0
s Cercopithecus_roloway.k141_2581234                          1357 1 +     14005 T
i Cercopithecus_roloway.k141_2581234                     I 1 I 10
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1116 1 -      8501 T
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       I 1 C 0
s Cheirogaleus_major.k141_333249                             21687 1 -     52598 T
i Cheirogaleus_major.k141_333249                         I 1 C 0
s Cheirogaleus_medius.k141_1055463                           17054 1 +     57038 T
i Cheirogaleus_medius.k141_1055463                       I 1 C 0
s Chinchilla_lanigera.JH722012.1                           1253508 1 +   2543920 T
i Chinchilla_lanigera.JH722012.1                         I 1 I 4
s Chlorocebus_aethiops.ctg25                              18429294 1 -  18827391 T
i Chlorocebus_aethiops.ctg25                             I 1 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15731 1 -     50209 T
i Chlorocebus_pygerythrus.k141_1025673                   I 1 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422731 1 + 135778131 T
i Chlorocebus_sabaeus.CM001947.1                         I 1 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 18938 1 +     19366 T
i Choloepus_didactylus.ChoDid_scaffold_45914             I 1 C 0
s Choloepus_hoffmanni.KN194906.1                            174015 1 +    839153 T
i Choloepus_hoffmanni.KN194906.1                         I 1 C 0
s Colobus_angolensis.KN981557.1                            1911207 1 +   2368649 T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949459 1 + 200372422 T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37741 1 +     84244 T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17548666 1 -  53390261 T
i Condylura_cristata.JH655891.1                          I 1 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          15033 1 -     20389 T
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      I 1 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 50641 1 +     63868 T
i Cricetomys_gambianus.CriGam_scaffold_18520             I 1 I 14
s Cricetulus_griseus.LT883664.1                           11668160 1 + 224834208 T
i Cricetulus_griseus.LT883664.1                          I 1 I 17
s Crocidura_indochinensis.CroInd_scaffold_37019               3591 1 -     19598 T
i Crocidura_indochinensis.CroInd_scaffold_37019          I 1 I 12
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29117 1 -     87169 T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 1 I 4
s Ctenodactylus_gundi.CteGun_scaffold_65                    837702 1 +   1526836 T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  36505 1 +     51376 T
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 1 C 0
s Dasypus_novemcinctus.JH564415.1                            64138 1 +   2246927 T
i Dasypus_novemcinctus.JH564415.1                        I 1 C 0
s Daubentonia_madagascariensis.ctg71                      12537890 1 -  12879189 t
i Daubentonia_madagascariensis.ctg71                     I 1 C 0
s Desmodus_rotundus.KZ672289.1                             8630748 1 +  20541912 C
i Desmodus_rotundus.KZ672289.1                           I 1 I 20
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673925 1 +   1390856 t
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 1 I 14
s Diceros_bicornis.DicBicMic_scaffold_5955                    6676 1 +    198055 t
i Diceros_bicornis.DicBicMic_scaffold_5955               I 1 I 14
s Dinomys_branickii.DinBra_scaffold_21862                    36987 1 +     67921 C
i Dinomys_branickii.DinBra_scaffold_21862                I 1 I 4
s Echinops_telfairi.JH980293.1                            48781192 1 + 111700974 T
i Echinops_telfairi.JH980293.1                           I 1 C 0
s Eidolon_helvum.KE759718.1                                  11146 1 +     11740 T
i Eidolon_helvum.KE759718.1                              I 1 C 0
s Elephantulus_edwardii.JH947257.1                         1098348 1 +  10337057 A
i Elephantulus_edwardii.JH947257.1                       I 1 C 0
s Ellobius_lutescens.LOEQ01008920.1                          21111 1 -    110024 T
i Ellobius_lutescens.LOEQ01008920.1                      I 1 I 17
s Ellobius_talpinus.LOJH01081419.1                            1015 1 +      8657 T
i Ellobius_talpinus.LOJH01081419.1                       I 1 I 17
s Enhydra_lutris.KZ291758.1                               16329934 1 -  41312741 T
i Enhydra_lutris.KZ291758.1                              I 1 I 4
s Eptesicus_fuscus.JH977646.1                              2146352 1 -  14770903 T
i Eptesicus_fuscus.JH977646.1                            I 1 I 20
s Equus_asinus.JREZ01000139.1                              1284184 1 +   4378816 t
i Equus_asinus.JREZ01000139.1                            I 1 I 4
s Equus_caballus.CM000403.2                               18532004 1 -  39960074 t
i Equus_caballus.CM000403.2                              I 1 I 4
s Equus_przewalskii.KK951119.1                               34033 1 +    498745 t
i Equus_przewalskii.KK951119.1                           I 1 I 4
s Erinaceus_europaeus.JH835339.1                           3328872 1 -   7059049 T
i Erinaceus_europaeus.JH835339.1                         I 1 I 3
s Erythrocebus_patas.Contig38                             21205899 1 -  21539334 T
i Erythrocebus_patas.Contig38                            I 1 C 0
s Eulemur_albifrons.k141_576796                              40734 1 -     44621 T
i Eulemur_albifrons.k141_576796                          I 1 C 0
s Eulemur_collaris.k141_377015                                7115 1 -     16928 T
i Eulemur_collaris.k141_377015                           I 1 C 0
s Eulemur_coronatus.k141_885031                              16147 1 -     25546 T
i Eulemur_coronatus.k141_885031                          I 1 C 0
s Eulemur_flavifrons.k141_1184614                            13343 1 +     26330 T
i Eulemur_flavifrons.k141_1184614                        I 1 C 0
s Eulemur_fulvus.k141_544389                                 14578 1 +     23973 T
i Eulemur_fulvus.k141_544389                             I 1 C 0
s Eulemur_macaco.k141_1562045                                13340 1 +     75513 t
i Eulemur_macaco.k141_1562045                            I 1 C 0
s Eulemur_mongoz.k141_232305                                 11270 1 +     97555 t
i Eulemur_mongoz.k141_232305                             I 1 C 0
s Eulemur_rubriventer.k141_774594                              762 1 +     13026 t
i Eulemur_rubriventer.k141_774594                        I 1 C 0
s Eulemur_rufus.k141_1476633                                  4814 1 -     17153 T
i Eulemur_rufus.k141_1476633                             I 1 C 0
s Eulemur_sanfordi.k141_1122526                              14387 1 +    111500 t
i Eulemur_sanfordi.k141_1122526                          I 1 C 0
s Felis_catus.CM001381.2                                  20237574 1 + 206538554 T
i Felis_catus.CM001381.2                                 I 1 I 20
s Felis_catus_fca126.CM031415.1                           20196417 1 + 205367284 T
i Felis_catus_fca126.CM031415.1                          I 1 I 20
s Felis_nigripes.FelNig_flattened_line_20823                 10170 1 -     36744 T
i Felis_nigripes.FelNig_flattened_line_20823             I 1 I 20
s Fukomys_damarensis.KN121974.1                             851034 1 +   3816255 T
i Fukomys_damarensis.KN121974.1                          I 1 C 0
s Galago_moholi.ctg2040                                     427210 1 -    453645 T
i Galago_moholi.ctg2040                                  I 1 C 0
s Galago_senegalensis.k141_631886                             4900 1 +     11339 T
i Galago_senegalensis.k141_631886                        I 1 C 0
s Galagoides_demidoff.k141_1711393                            2198 1 +     41679 T
i Galagoides_demidoff.k141_1711393                       I 1 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1824 1 -      9135 T
i Galeopterus_variegatus.GalVar_scaffold_108840          I 1 I 1
s Glis_glis.GliGli_scaffold_19807                            31990 1 +     49224 T
i Glis_glis.GliGli_scaffold_19807                        I 1 I 1
s Gorilla_beringei.k141_3596273                              16702 1 -     32273 T
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186338838 1 + 186649187 T
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33238 1 +     78134 T
i Graphiurus_murinus.GraMur_scaffold_10447               I 1 I 17
s Hapalemur_alaotrensis.k141_170648                           7442 1 -     19426 T
i Hapalemur_alaotrensis.k141_170648                      I 1 C 0
s Hapalemur_gilberti.k141_488810                             12595 1 -     15286 T
i Hapalemur_gilberti.k141_488810                         I 1 C 0
s Hapalemur_griseus.k141_1511508                             14234 1 +     18253 T
i Hapalemur_griseus.k141_1511508                         I 1 C 0
s Hapalemur_meridionalis.k141_248335                         14335 1 -     41752 T
i Hapalemur_meridionalis.k141_248335                     I 1 C 0
s Hapalemur_occidentalis.k141_907772                         14172 1 -     16460 T
i Hapalemur_occidentalis.k141_907772                     I 1 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242954 1 +    327341 T
i Helogale_parvula.HelPar_flattened_line_2585            I 1 I 4
s Heterocephalus_glaber.JH602082.1                        20662792 1 +  22651954 T
i Heterocephalus_glaber.JH602082.1                       I 1 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1513 1 +      7595 T
i Heterohyrax_brucei.HetBruBak_scaffold_122365           I 1 C 0
s Hoolock_leuconedys.ctg274                                    435499 1 +    630532 T
i Hoolock_leuconedys.ctg274                                 I 1 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45657 1 +     55795 T
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 1 I 4
s Hystrix_cristata.HysCri_scaffold_5660                      83690 1 +    135385 T
i Hystrix_cristata.HysCri_scaffold_5660                  I 1 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7521503 1 -   7955117 T
i Ictidomys_tridecemlineatus.JH393364.1                  I 1 I 1
s Indri_indri.k141_3655594                                   23132 1 +     31101 t
i Indri_indri.k141_3655594                               I 1 C 0
s Jaculus_jaculus.JH725527.1                               8277524 1 -   9596543 T
i Jaculus_jaculus.JH725527.1                             I 3 I 13
s Lasiurus_borealis.LasBor_scaffold_32767                    17002 1 -     42476 T
i Lasiurus_borealis.LasBor_scaffold_32767                I 1 I 20
s Lemur_catta.scaffold_24                                 15524687 1 -  30322482 t
i Lemur_catta.scaffold_24                                I 1 C 0
s Leontocebus_fuscicollis.k141_1820339                        8624 1 +     64341 T
i Leontocebus_fuscicollis.k141_1820339                   I 2 C 0
s Leontocebus_illigeri.k141_1304848                            964 1 -     35062 T
i Leontocebus_illigeri.k141_1304848                      I 2 C 0
s Leontocebus_nigricollis.k141_4610752                        8651 1 +     35603 T
i Leontocebus_nigricollis.k141_4610752                   I 2 C 0
s Leontopithecus_chrysomelas.k141_1519602                    30264 1 +     38576 T
i Leontopithecus_chrysomelas.k141_1519602                I 2 C 0
s Leontopithecus_rosalia.k141_464620                         26968 1 +     66356 T
i Leontopithecus_rosalia.k141_464620                     I 2 C 0
s Lepilemur_ankaranensis.k141_596936                         11577 1 -     23766 T
i Lepilemur_ankaranensis.k141_596936                     I 1 I 8
s Lepilemur_dorsalis.k141_577674                             29638 1 +     45836 T
i Lepilemur_dorsalis.k141_577674                         I 1 I 8
s Lepilemur_ruficaudatus.k141_121139                          2176 1 +     25010 T
i Lepilemur_ruficaudatus.k141_121139                     I 1 I 8
s Lepilemur_septentrionalis.k141_185316                      27570 1 +     54090 T
i Lepilemur_septentrionalis.k141_185316                  I 1 I 8
s Leptonychotes_weddellii.KB714746.1                       3043676 1 +   3914936 T
i Leptonychotes_weddellii.KB714746.1                     I 1 I 4
s Lepus_americanus.LepAme_scaffold_107385                     7106 1 -     14121 T
i Lepus_americanus.LepAme_scaffold_107385                I 1 C 0
s Lophocebus_aterrimus.ctg367                              1437850 1 +   1826925 T
i Lophocebus_aterrimus.ctg367                            I 1 C 0
s Loris_lydekkerianus.k141_2539221                            6458 1 +     11245 T
i Loris_lydekkerianus.k141_2539221                       I 1 C 0
s Loris_tardigradus.ctg83                                  1005279 1 +   6120653 T
i Loris_tardigradus.ctg83                                I 1 C 0
s Loxodonta_africana.GL010049.1                            4217951 1 -  43346337 C
i Loxodonta_africana.GL010049.1                          I 1 C 0
s Lycaon_pictus.CM007581.1                                17955953 1 -  59628241 T
i Lycaon_pictus.CM007581.1                               I 1 I 4
s Macaca_arctoides.k141_2326796                               7665 1 +     40492 T
i Macaca_arctoides.k141_2326796                          I 1 C 0
s Macaca_assamensis.Contig5                               59676924 1 +  60120075 T
i Macaca_assamensis.Contig5                              I 1 C 0
s Macaca_cyclopis.k119_18836                                 13440 1 -     26193 T
i Macaca_cyclopis.k119_18836                             I 1 C 0
s Macaca_fascicularis.k141_814140                            81224 1 -    114318 T
i Macaca_fascicularis.k141_814140                        I 1 C 0
s Macaca_fuscata.k119_255327                                  6911 1 -     23192 T
i Macaca_fuscata.k119_255327                             I 1 C 0
s Macaca_leonina.k141_3550399                                16384 1 -     29190 T
i Macaca_leonina.k141_3550399                            I 1 C 0
s Macaca_maura.k141_2733130                                  24949 1 +     37952 T
i Macaca_maura.k141_2733130                              I 1 C 0
s Macaca_mulatta.NC_041758.1                             186840038 1 + 187317192 T
i Macaca_mulatta.NC_041758.1                             I 1 C 0
s Macaca_nemestrina.KQ007038.1                            25458601 1 -  25927173 T
i Macaca_nemestrina.KQ007038.1                           I 1 C 0
s Macaca_nigra.k141_1655396                                  80797 1 +     89720 T
i Macaca_nigra.k141_1655396                              I 1 C 0
s Macaca_radiata.k141_3680011                                 7798 1 +     20474 T
i Macaca_radiata.k141_3680011                            I 1 C 0
s Macaca_siberu.k141_635500                                   7598 1 -     14993 T
i Macaca_siberu.k141_635500                              I 1 C 0
s Macaca_silenus.Contig273                                  330464 1 -    668171 T
i Macaca_silenus.Contig273                               I 1 C 0
s Macaca_thibetana.k99_256239                                 5911 1 -     24072 T
i Macaca_thibetana.k99_256239                            I 1 C 0
s Macaca_tonkeana.k141_1498238                               26536 1 -     45290 T
i Macaca_tonkeana.k141_1498238                           I 1 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91240 1 +     94391 t
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 1 C 0
s Mandrillus_leucophaeus.scaffold280                      23938127 1 -  24302211 C
i Mandrillus_leucophaeus.scaffold280                     I 1 C 0
s Mandrillus_sphinx.Contig270                               352249 1 +    752769 C
i Mandrillus_sphinx.Contig270                            I 1 C 0
s Marmota_marmota.CZRN01000018.1                          33103700 1 -  40650429 T
i Marmota_marmota.CZRN01000018.1                         I 1 I 1
s Megaderma_lyra.MegLyr_scaffold_4542                        11064 1 -    207569 T
i Megaderma_lyra.MegLyr_scaffold_4542                    I 1 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10669 1 +     13704 T
i Mellivora_capensis.MelCap_flattened_line_69365         I 1 I 4
s Meriones_unguiculatus.MerUng_scaffold_7390                 33352 1 +    140813 T
i Meriones_unguiculatus.MerUng_scaffold_7390             I 1 I 11
s Mesocricetus_auratus.KB708134.1                         12182816 1 -  29670104 T
i Mesocricetus_auratus.KB708134.1                        I 1 I 17
s Mico_argentatus.k141_1239457                                6782 1 -      7380 T
i Mico_argentatus.k141_1239457                           I 2 C 0
s Mico_schneideri.k141_1950671                                      6755 1 -      7356 T
i Mico_schneideri.k141_1950671                                 I 2 C 0
s Microcebus_murinus.CM007674.1                           18292113 1 -  93316391 T
i Microcebus_murinus.CM007674.1                          I 1 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    22898 1 -    145209 T
i Microgale_talazaci.MicTal_scaffold_6613                I 1 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                16272 1 -     19307 C
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 1 I 20
s Microtus_ochrogaster.CM001695.1                         11261064 1 -  27267610 T
i Microtus_ochrogaster.CM001695.1                        I 1 I 17
s Miniopterus_natalensis.LDJU01000034.1                    1851228 1 +   8254450 T
i Miniopterus_natalensis.LDJU01000034.1                  I 1 I 20
s Miniopterus_schreibersii.MinSch_scaffold_18080             34908 1 +     64694 T
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 1 I 20
s Miopithecus_ogouensis.k141_534055                           9833 1 -     28506 T
i Miopithecus_ogouensis.k141_534055                      I 1 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6544 1 -      8324 T
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 1 I 4
s Mirza_zaza.k141_952172                                      9657 1 -     37649 T
i Mirza_zaza.k141_952172                                 I 1 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142270 1 -    366855 C
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 1 I 20
s Mungos_mungo.MunMun_flattened_line_23663                   36053 1 +     37127 T
i Mungos_mungo.MunMun_flattened_line_23663               I 1 I 4
s Murina_feae.MurFea_scaffold_85699                           7456 1 +     14753 T
i Murina_feae.MurFea_scaffold_85699                      I 1 I 20
s Mus_caroli.LT608237.1                                   84361967 1 - 120012414 T
i Mus_caroli.LT608237.1                                  I 1 I 11
s Mus_musculus.chr8                                       87650960 1 - 129401213 T
i Mus_musculus.chr8                                      I 1 I 11
s Mus_pahari.LT608297.1                                   31355617 1 -  89631738 T
i Mus_pahari.LT608297.1                                  I 1 I 11
s Mus_spretus.CM004101.1                                  90753023 1 - 130317789 T
i Mus_spretus.CM004101.1                                 I 1 I 11
s Mustela_putorius.JH418006.1                               302081 1 -  14710649 T
i Mustela_putorius.JH418006.1                            I 1 I 4
s Myocastor_coypus.MyoCoy_scaffold_10123                     71820 1 -     80779 T
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 1 C 0
s Myotis_brandtii.KE162005.1                                281091 1 -  10118263 T
i Myotis_brandtii.KE162005.1                             I 1 I 20
s Myotis_davidii.KB100139.1                                1588347 1 -   6019432 T
i Myotis_davidii.KB100139.1                              I 1 I 20
s Myotis_lucifugus.GL429869.1                              3904443 1 -   4330536 T
i Myotis_lucifugus.GL429869.1                            I 1 I 20
s Myotis_myotis.MyoMyo_scaffold_281845                         594 1 +      1835 T
i Myotis_myotis.MyoMyo_scaffold_281845                   I 1 I 20
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189891 1 +    196477 T
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 1 C 0
s Nannospalax_galili.KL204047.1                            2034671 1 -   3037898 T
i Nannospalax_galili.KL204047.1                          I 1 I 12
s Nasalis_larvatus.k141_413338                               15835 1 +     21681 T
i Nasalis_larvatus.k141_413338                           I 1 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308130 1 +  31847680 T
i Neomonachus_schauinslandi.NINY01007730.1               I 1 I 4
s Noctilio_leporinus.NocLep_scaffold_251                    758505 1 +    783361 T
i Noctilio_leporinus.NocLep_scaffold_251                 I 1 I 20
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150016 1 -   9404916 T
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 1 I 4
s Nycticebus_bengalensis.LG01                            102586823 1 - 196305487 T
i Nycticebus_bengalensis.LG01                            I 1 C 0
s Nycticebus_coucang.k141_1127096                              747 1 +      2075 T
i Nycticebus_coucang.k141_1127096                        I 1 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105762178 1 + 199412804 T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 1 C 0
s Ochotona_princeps.JH802162.1                             1364479 1 +   3988456 A
i Ochotona_princeps.JH802162.1                           I 1 C 0
s Octodon_degus.JH651603.1                                  747561 1 +  11899542 T
i Octodon_degus.JH651603.1                               I 1 C 0
s Odobenus_rosmarus.KB229312.1                              507272 1 -   2017862 T
i Odobenus_rosmarus.KB229312.1                           I 1 I 4
s Ondatra_zibethicus.OndZib_scaffold_46174                   25742 1 +     28053 T
i Ondatra_zibethicus.OndZib_scaffold_46174               I 1 I 17
s Onychomys_torridus.OnyTor_scaffold_2986                    80744 1 +    102263 T
i Onychomys_torridus.OnyTor_scaffold_2986                I 1 I 17
s Orycteropus_afer.OryAfe_flattened_line_144387              10731 1 -     18566 T
i Orycteropus_afer.OryAfe_flattened_line_144387          I 1 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147966 1 + 174332312 T
i Oryctolagus_cuniculus.CM000791.1                       I 1 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462965 1 -    559221 T
i Otocyon_megalotis.JAEUCK010005147.1                    I 1 I 4
s Otolemur_crassicaudatus.k141_222918                         4730 1 +      8798 T
i Otolemur_crassicaudatus.k141_222918                    I 1 C 0
s Otolemur_garnettii.GL873799.1                             696893 1 -   1103335 T
i Otolemur_garnettii.GL873799.1                          I 1 C 0
s Pan_paniscus.KQ411613.1                                    44790 1 +     80009 T
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.KZ622849.1                                 22993 1 +    110857 T
i Pan_troglodytes.KZ622849.1                             I 43 I 165
s Panthera_onca.PanOnc_flattened_line_3271                  151780 1 +    230217 T
i Panthera_onca.PanOnc_flattened_line_3271               I 1 I 20
s Panthera_pardus.KV860321.1                                264989 1 +  18783137 T
i Panthera_pardus.KV860321.1                             I 1 I 20
s Panthera_tigris.KE722367.1                               4721868 1 -   8748460 T
i Panthera_tigris.KE722367.1                             I 1 I 20
s Papio_anubis.CM001495.2                                183443927 1 + 183742232 T
i Papio_anubis.CM001495.2                                I 1 C 0
s Papio_cynocephalus.k141_4307930                             7573 1 +     20448 T
i Papio_cynocephalus.k141_4307930                        I 1 C 0
s Papio_hamadryas.Contig39                                20564385 1 +  20919399 T
i Papio_hamadryas.Contig39                               I 1 C 0
s Papio_kindae.k141_1936966                                   6317 1 +     41871 T
i Papio_kindae.k141_1936966                              I 1 C 0
s Papio_papio.k141_802527                                     9610 1 +     27711 T
i Papio_papio.k141_802527                                I 1 C 0
s Papio_ursinus.k141_5274964                                   607 1 -     11374 T
i Papio_ursinus.k141_5274964                             I 1 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13277 1 -     78924 T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 1 I 4
s Perodicticus_ibeanus.k141_855320                           10717 1 +     13100 T
i Perodicticus_ibeanus.k141_855320                       I 1 C 0
s Perodicticus_potto.k141_1092580                             9111 1 +     25941 T
i Perodicticus_potto.k141_1092580                        I 1 C 0
s Peromyscus_maniculatus.KI615324.1                       18195367 1 -  18517816 T
i Peromyscus_maniculatus.KI615324.1                      I 1 I 17
s Petromus_typicus.PetTyp_scaffold_42190                     28701 1 -     29689 T
i Petromus_typicus.PetTyp_scaffold_42190                 I 1 C 0
s Piliocolobus_badius.k141_1234363                           44326 1 +     62158 G
i Piliocolobus_badius.k141_1234363                       I 1 C 0
s Piliocolobus_gordonorum.k141_381342                        39073 1 +     89929 G
i Piliocolobus_gordonorum.k141_381342                    I 1 C 0
s Piliocolobus_kirkii.k141_448987                            40489 1 +     51399 G
i Piliocolobus_kirkii.k141_448987                        I 1 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296727 1 -  14605196 G
i Piliocolobus_tephrosceles.PDMG02000141.1               I 1 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2393 1 +     22620 T
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 1 I 20
s Pongo_abelii.CM009266.2                                189131830 1 + 189387572 T
i Pongo_abelii.CM009266.2                                I 1 C 0
s Pongo_pygmaeus.ctg66                                     9571437 1 +   9816681 T
i Pongo_pygmaeus.ctg66                                   I 1 C 0
s Presbytis_comata.k141_677006                               74010 1 -     81375 C
i Presbytis_comata.k141_677006                           I 1 C 0
s Presbytis_mitrata.k141_1087752                              5831 1 +     19060 C
i Presbytis_mitrata.k141_1087752                         I 1 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 13968 1 -     22811 T
i Procavia_capensis.ProCapCap_scaffold_85530             I 1 C 0
s Prolemur_simus.MPIZ01000396.1                            2597367 1 -   4620579 T
i Prolemur_simus.MPIZ01000396.1                          I 1 C 0
s Propithecus_coquerelli.NW_012148875.1                     991353 1 +   2598838 T
i Propithecus_coquerelli.NW_012148875.1                  I 1 C 0
s Propithecus_coronatus.k141_347390                          29665 1 +     38485 T
i Propithecus_coronatus.k141_347390                      I 1 C 0
s Propithecus_diadema.k141_58108                              1707 1 -     13098 T
i Propithecus_diadema.k141_58108                         I 1 C 0
s Propithecus_edwardsi.k141_1176054                          27186 1 +     35766 T
i Propithecus_edwardsi.k141_1176054                      I 1 C 0
s Propithecus_perrieri.k141_1200571                           5373 1 -     24134 T
i Propithecus_perrieri.k141_1200571                      I 1 C 0
s Propithecus_tattersalli.k141_790011                        29198 1 -     67325 T
i Propithecus_tattersalli.k141_790011                    I 1 C 0
s Propithecus_verreauxi.k141_956661                           5421 1 -      6182 T
i Propithecus_verreauxi.k141_956661                      I 1 C 0
s Psammomys_obesus.NESX01036370.1                            10998 1 -     21651 T
i Psammomys_obesus.NESX01036370.1                        I 1 I 11
s Pteronotus_parnellii.KE909381.1                            15779 1 -     21811 C
i Pteronotus_parnellii.KE909381.1                        I 1 I 20
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40863 1 +     42204 T
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 1 I 4
s Pteropus_alecto.KB030862.1                              22977386 1 +  28871421 t
i Pteropus_alecto.KB030862.1                             I 1 C 0
s Pteropus_vampyrus.KN534172.1                                7439 1 -      8028 T
i Pteropus_vampyrus.KN534172.1                           I 1 C 0
s Puma_concolor.QAVW01001104.1                            20274939 1 -  38429054 T
i Puma_concolor.QAVW01001104.1                           I 1 I 20
s Pygathrix_cinerea.k141_1153803                             15817 1 -     91421 T
i Pygathrix_cinerea.k141_1153803                         I 1 C 0
s Pygathrix_nigripes_b.ctg100                                 7609937 1 +   7812017 T
i Pygathrix_nigripes_b.ctg100                               I 1 C 0
s Pygathrix_nigripes_a.k141_215492                             15816 1 -     72585 T
i Pygathrix_nigripes_a.k141_215492                         I 1 C 0
s Rattus_norvegicus.chr16                                 53571215 1 +  90668790 T
i Rattus_norvegicus.chr16                                I 1 I 11
s Rhinopithecus_bieti.k119_217274                             7527 1 -     11128 T
i Rhinopithecus_bieti.k119_217274                        I 1 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236876 1 - 195417433 T
i Rhinopithecus_roxellana.NC_044550.1                    I 1 C 0
s Rhinopithecus_strykeri.ctg102                            7672532 1 +   7961872 T
i Rhinopithecus_strykeri.ctg102                          I 1 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88427 1 -     96226 T
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 1 C 0
s Saguinus_bicolor.k141_8081                                  1939 1 +     42994 T
i Saguinus_bicolor.k141_8081                             I 2 C 0
s Saguinus_imperator.k141_1496743                              633 1 +      2253 T
i Saguinus_imperator.k141_1496743                        I 2 C 0
s Saguinus_inustus.k141_3945547                               1061 1 -      8737 T
i Saguinus_inustus.k141_3945547                          I 2 C 0
s Saguinus_labiatus.k141_4004060                               715 1 +      2343 T
i Saguinus_labiatus.k141_4004060                         I 2 C 0
s Saguinus_midas.LG03                                    209475593 1 + 209938924 T
i Saguinus_midas.LG03                                    I 2 C 0
s Saguinus_mystax.k141_374627                                 9296 1 -      9399 T
i Saguinus_mystax.k141_374627                            I 2 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951663 1 - 121099817 T
i Saimiri_boliviensis.NW_024100920.1                     I 2 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24005 1 +     46362 T
i Saimiri_cassiquiarensis.k141_2188234                   I 2 C 0
s Saimiri_macrodon.k141_716185                               24100 1 +     45824 T
i Saimiri_macrodon.k141_716185                           I 2 C 0
s Saimiri_oerstedii.k141_1487881                             40779 1 -     64574 T
i Saimiri_oerstedii.k141_1487881                         I 2 C 0
s Saimiri_sciureus.k141_2278166                               3852 1 -     23631 T
i Saimiri_sciureus.k141_2278166                          I 2 C 0
s Saimiri_ustus.k141_1484609                                 23996 1 -     61129 T
i Saimiri_ustus.k141_1484609                             I 2 C 0
s Sapajus_apella.ctg103                                    5421369 1 -   5703754 G
i Sapajus_apella.ctg103                                  I 2 I 2
s Sapajus_macrocephalus.k141_351809                          56610 1 -     80660 G
i Sapajus_macrocephalus.k141_351809                      I 2 I 2
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153810 1 -    313613 T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 1 C 0
s Semnopithecus_entellus.k141_1672505                          708 1 -     12572 T
i Semnopithecus_entellus.k141_1672505                    I 1 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27558 1 +     39453 T
i Semnopithecus_hypoleucos.k141_1615806                  I 1 C 0
s Semnopithecus_johnii.k141_670120                            8076 1 +     27826 T
i Semnopithecus_johnii.k141_670120                       I 1 C 0
s Semnopithecus_priam.k141_638794                             7598 1 -     19483 T
i Semnopithecus_priam.k141_638794                        I 1 C 0
s Semnopithecus_schistaceus.k141_1572284                       899 1 -     12762 T
i Semnopithecus_schistaceus.k141_1572284                 I 1 C 0
s Semnopithecus_vetulus.k141_910252                            760 1 +     13763 T
i Semnopithecus_vetulus.k141_910252                      I 1 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                      896 1 -     30804 T
i Sigmodon_hispidus.SigHis_scaffold_42075                I 1 I 17
s Solenodon_paradoxus.SolPar_flattened_line_126               4372 1 +   1910179 T
i Solenodon_paradoxus.SolPar_flattened_line_126          I 1 C 0
s Sorex_araneus.JH798187.1                                13651624 1 -  18376816 T
i Sorex_araneus.JH798187.1                               I 1 I 11
s Spermophilus_dauricus.KZ294078.1                         1954556 1 -   3870691 T
i Spermophilus_dauricus.KZ294078.1                       I 1 I 1
s Spilogale_gracilis.SpiGra_flattened_line_13525             31349 1 +     97271 T
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 1 I 4
s Suricata_suricatta.SurSur_flattened_line_6629              18956 1 -    196729 T
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 I 4
s Sus_scrofa.CM000828.4                                    6811441 1 +  69701581 T
i Sus_scrofa.CM000828.4                                  I 1 I 12
s Tadarida_brasiliensis.TadBra_scaffold_25820                11433 1 +     41958 G
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 1 I 20
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73250 1 +    116680 G
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 1 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      119404 1 -    156842 c
i Tapirus_indicus.TapInd_scaffold_9301                   I 1 I 14
s Tapirus_terrestris.TapTer_scaffold_755                    387860 1 +    539355 t
i Tapirus_terrestris.TapTer_scaffold_755                 I 1 I 14
s Theropithecus_gelada.CM009954.1                        186429245 1 + 186847797 T
i Theropithecus_gelada.CM009954.1                        I 1 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106006 1 +    114563 T
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 1 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   7006 1 +      8208 T
i Tolypeutes_matacus.TolMat_scaffold_228639              I 1 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81827 1 +    610378 C
i Tonatia_saurophila.TonSau_scaffold_294                 I 1 I 19
s Trachypithecus_auratus.k141_722599                         11649 1 -     20410 T
i Trachypithecus_auratus.k141_722599                     I 1 C 0
s Trachypithecus_crepusculus.k141_582567                       763 1 -     12674 T
i Trachypithecus_crepusculus.k141_582567                 I 1 C 0
s Trachypithecus_cristatus.k141_580354                       11750 1 +     19930 T
i Trachypithecus_cristatus.k141_580354                   I 1 C 0
s Trachypithecus_francoisi.k141_1412647                       8161 1 -     19997 T
i Trachypithecus_francoisi.k141_1412647                  I 1 C 0
s Trachypithecus_geei.k141_277701                            48300 1 -     60166 T
i Trachypithecus_geei.k141_277701                        I 1 C 0
s Trachypithecus_germaini.k141_912491                        15772 1 -     27529 T
i Trachypithecus_germaini.k141_912491                    I 1 C 0
s Trachypithecus_hatinhensis.k141_143409                     15716 1 -     18194 T
i Trachypithecus_hatinhensis.k141_143409                 I 1 C 0
s Trachypithecus_laotum.k141_907409                           9428 1 -     21137 T
i Trachypithecus_laotum.k141_907409                      I 1 C 0
s Trachypithecus_leucocephalus.k141_587342                    8131 1 -     10723 T
i Trachypithecus_leucocephalus.k141_587342               I 1 C 0
s Trachypithecus_melamera.k141_434728                         7303 1 +      9834 T
i Trachypithecus_melamera.k141_434728                    I 1 C 0
s Trachypithecus_obscurus.k141_190785                        25616 1 +     32220 T
i Trachypithecus_obscurus.k141_190785                    I 1 C 0
s Trachypithecus_phayrei.ctg124                            5939718 1 +   6242583 T
i Trachypithecus_phayrei.ctg124                          I 1 C 0
s Trachypithecus_pileatus.k141_2007326                        8969 1 +     20839 T
i Trachypithecus_pileatus.k141_2007326                   I 1 C 0
s Trichechus_manatus.JH594705.1                            4293869 1 +  10818551 T
i Trichechus_manatus.JH594705.1                          I 1 C 0
s Tupaia_chinensis.KB320699.1                              2156424 1 +   4065304 T
i Tupaia_chinensis.KB320699.1                            I 1 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9867 1 -     10553 T
i Tupaia_tana.TupTan_flattened_line_97126                I 1 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   53921 1 -     77625 T
i Uropsilus_gracilis.UroGra_scaffold_12083               I 1 I 3
s Ursus_maritimus.KK499267.1                               4851065 1 -   5085361 T
i Ursus_maritimus.KK499267.1                             I 1 I 4
s Varecia_rubra.k141_590885                                  12032 1 +     50397 T
i Varecia_rubra.k141_590885                              I 1 C 0
s Varecia_variegata.k141_1128296                             12091 1 +     24756 T
i Varecia_variegata.k141_1128296                         I 1 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 11416 1 -     43706 T
i Vulpes_lagopus.VulLag_flattened_line_30954             I 1 I 4
s Xerus_inauris.XerIna_scaffold_2302                          1677 1 +    224448 T
i Xerus_inauris.XerIna_scaffold_2302                     I 1 I 1
s Zapus_hudsonius.ZapHud_scaffold_11398                      15523 1 +     63895 T
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 2 I 13
e Chiropotes_albinasus.k141_2206961                           1651 303 -     15524 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 0 +     12536 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vicugna_pacos.KN270157.1                                 5372411 6 -   5488506 I
e Tursiops_truncatus.MRVK01000835.1                       15738584 0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641 0 -      1748 C
e Tarsius_wallacei.k141_254427                                1877 3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080 3 +     70052 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Rhinolophus_sinicus.LVEH01000134.1                        367660 0 -   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090 0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384 0 +     63832 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491 0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345 0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422 0 +   7148211 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466 0 -    437263 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961 0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50964 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18978 0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344 0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650 0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293 0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_29171               42604 0 +     43066 C
e Hipposideros_armiger.JXIK01000431.1                       111173 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 0 +     36099 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752 0 +    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076 0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cephalopachus_bancanus.k141_1423433                         6085 3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Carlito_syrichta.NW_007259797.1                           156587 3 -    496798 I
e Capra_hircus.CM004588.1                                 18061030 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310 0 +  46296322 C
e Camelus_ferus.KB017975.1                                  403651 6 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2335354 6 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10002878 6 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2819682 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376 0 +  48749331 C
e Bison_bison.KN261452.1                                    200171 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440 0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675 0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192 0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       7448 47 +     62944 TT---------------------TT--GT----C-TCA--------GT----C-CA-TCTAAC---T-------------------TCTATTTCTAATGTAATTC-TT-TA-T--T
s Acinonyx_jubatus.LLWD01001279.1                           827953 25 -   1699592 --------------------------------------------------------------------------------------ACTGCTTGTAATGTAATCC-TC-TT-T--C
i Acinonyx_jubatus.LLWD01001279.1                        I 20 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     71417 35 +     87051 ----------------------------------------------------------TCCAACTGTG------------------GCTGCTTCTAATGTAATCC-TC-TT-T--T
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 11 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511210 45 -  29979442 -----------------------------------CTCACT-C-A-AT----T-CA-TCCAAC---T-------------------ACCCCTTGCAATGTCATCC-GC-TT-T--C
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 4 C 0
s Ailurus_fulgens.LNAC01001112.1                             79944 44 -    347723 -----------------------------------CTCACT-C-A-GT----C-CA-CCCAAC---T-------------------ACTGCTTTT-ATGTCATCC-AC-TT-T--C
i Ailurus_fulgens.LNAC01001112.1                         I 4 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     75123 35 -     89534 ----------------------------------------------------------CCCAGTTGT-T-----------------GCGGCTTCTAATATAATCT-TC-TT-T--T
i Allactaga_bullata.AllBul_scaffold_9566                 I 13 C 0
s Allenopithecus_nigroviridis.k141_3361533                   15377 47 -     52922 TT---------------------TT--GT----C-TCA--------GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15293 51 -     28001 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          5791 51 -     18505 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           6643 51 -     12518 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              8231 36 +     51355 ----------------------------------------------GT----C-CA-TCTAAC---T-------------------TCCACTTCTAATGTAATTCCTT-TT-----
i Alouatta_belzebul.k141_3560514                         I 4 I 3
s Alouatta_caraya.k141_1701091                                1340 37 -     36483 ----------------------------------------------GT----C-CA-TCTAAC---T-------------------TCCACTTCTAATGTAATTCCTT-TT-T---
i Alouatta_caraya.k141_1701091                           I 4 I 2
s Alouatta_discolor.k141_566626                              11789 40 +     28687 ----------------------------------------------GT----C-CA-TCTAAC---T-------------------TCCACTTCTAATGTAATTCCTT-TA-ATTT
i Alouatta_discolor.k141_566626                          I 4 C 0
s Alouatta_juara.k141_1302312                                  305 37 +     27940 ----------------------------------------------GT----C-CA-TCTAAC---T-------------------TCCACTTCTAATGTAATTCCTT-TT-T---
i Alouatta_juara.k141_1302312                            I 4 I 2
s Alouatta_macconnelli.k141_918386                            1349 37 -      9457 ----------------------------------------------GT----C-CA-TCTAAC---T-------------------TCCACTTCTAATGTAATTCCTT-TT-T---
i Alouatta_macconnelli.k141_918386                       I 4 I 2
s Alouatta_nigerrima.k141_1929159                              305 37 +     30492 ----------------------------------------------GT----C-CA-TCTAAC---T-------------------TCCACTTCTAATGTAATTCCTT-TT-T---
i Alouatta_nigerrima.k141_1929159                        I 4 I 2
s Alouatta_palliata.k141_2135620                              4300 39 +     47717 ----------------------------------------------GT----C-CA-TCTAAC---T-------------------TCCACTTCTAATGTAATTCCTT--T-TTTT
i Alouatta_palliata.k141_2135620                         I 4 C 0
s Alouatta_puruensis.k141_362188                              1032 37 +      5663 ----------------------------------------------GT----C-CA-TCTAAC---T-------------------TCCACTTCTAATGTAATTCCTT-TT-T---
i Alouatta_puruensis.k141_362188                         I 4 I 2
s Alouatta_seniculus.k141_117119                             15484 37 +     50774 ----------------------------------------------GT----C-CA-TCTAAC---T-------------------TCCACTTCTAATGTAATTCCTT-TT-T---
i Alouatta_seniculus.k141_117119                         I 4 I 2
s Anoura_caudifer.AnoCau_scaffold_1412                      185997 21 +    412891 ------------------------------------------------------------------------------------------TTTCTAATGCAATAC-TA-AT-T--G
i Anoura_caudifer.AnoCau_scaffold_1412                   I 19 C 0
s Aotus_azarae.k141_3104676                                  16463 53 -     33861 TT---------------------T---GT----C-TCA-CT---AGGT----C-CA-TCTAAC---T-------------------TCCACTTCTAATGTAATTCCTT-TT-TTTT
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            16460 53 -     34016 TT---------------------T---GT----C-TCA-CT-T-G-GT----C-CA-TCTAAC---T-------------------TCCACTTCTAATGTAACTCCTT-TT-TTTT
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4298887 53 -   5030052 TT---------------------T---GT----C-TCA-CT---AGGT----C-CA-TCTAAC---T-------------------TCCACTTCTAATGTAACtcctt-tt-tttt
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             16496 53 -     34685 TT---------------------T---GT----C-TCA-CT---AGGT----C-CA-TCTAAC---T-------------------TCCACTTCTAATGTAATTCCTT-TT-TTTT
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               29621 53 -     47192 TT---------------------T---GT----C-TCA-CT---AGGT----C-CA-TCTAAC---T-------------------TCCACTTCTAATGTAATTCCTT-TT-TTTT
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13224 52 +     20879 TA---------------------G---A-----T-TCACCT---A-GT----C-AC-ACTAAAC-AC-T-----------------GCTCCTTCTAAGGTAATCC-TT-T-TT--C
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 1 C 0
s Arctocebus_calabarensis.k141_2318572                       12062 50 +     14667 TT---------------------T---GC----C-TCT-CT-C-A-CT----C-TA-TCTGAC---C-------------------ACTGCTTCTAATGCAAATC-TT-TT-T--C
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5387 21 +     43469 ------------------------------------------------------------------------------------------TTTCTAGTGCAATAC-TC-AT-T--G
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 19 C 0
s Avahi_laniger.k141_765380                                  54310 50 -     92717 TT---------------------T---GC----C-TCT-CT-C-A-GT----C-CA-TTTAAC---C-------------------ATTGCTTCTAGTATCAATC-TT-TT-T--C
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54941 50 +     85213 TT---------------------T---GC----C-TCT-CT-C-A-GT----C-CA-TTTAAC---C-------------------ATTGCTTCTAGTATCAATC-TT-TT-T--C
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             6347 50 -     10423 TT---------------------T---GC----C-TCA-CT-T-G-GT----C-CA-TGTAAC---T-------------------TCCACTTCTAATGTAATTCCTT-TT-T---
i Callibella_humilis.k141_1278103                        C 0 I 1
s Callithrix_geoffroyi.k119_69176                              186 50 +      5377 TT---------------------T---GT----C-TCA-CT-C-G-GT----C-CA-TGTAAC---T-------------------TCCACTTCTAATGTAATTCCTT-TT-T---
i Callithrix_geoffroyi.k119_69176                        C 0 I 1
s Callithrix_jacchus.pat_scaffold_3                       23592047 50 - 189096842 TT---------------------T---GT----C-TCA-CT-C-G-GT----C-CA-TGTAAC---T-------------------TCCACTTCTAATGTAATTCCTT-TT-T---
i Callithrix_jacchus.pat_scaffold_3                      C 0 I 1
s Callithrix_kuhlii.k119_1168854                               861 50 -     12329 TT---------------------T---GT----C-TCA-CT-C-A-GT----C-CA-TGTAAC---T-------------------TCCACTTCTAATGTAATTCCTT-TT-T---
i Callithrix_kuhlii.k119_1168854                         C 0 I 1
s Camelus_bactrianus.KN276810.1                           10002884 24 -  17673402 ---------------------------------------------------------------------------------------CTGTTTCTAATGTAATTC-TC-TT-C--T
i Camelus_bactrianus.KN276810.1                          I 6 C 0
s Camelus_dromedarius.KN272107.1                           2335360 24 -   7040546 ---------------------------------------------------------------------------------------CTGTTTCTAATGTAATTC-TC-TT-C--T
i Camelus_dromedarius.KN272107.1                         I 6 C 0
s Camelus_ferus.KB017975.1                                  403657 24 -   1652518 ---------------------------------------------------------------------------------------CTGTTTCTAATGTAATTC-TC-TT-C--T
i Camelus_ferus.KB017975.1                               I 6 C 0
s CanFam4.chr16                                           17799799 45 -  60362399 -----------------------------------CTCACT-C-A-GT----C-CA-CCCAAC---C-------------------ACCGTTTGCAATGTAATCC-AC-TT-T--C
i CanFam4.chr16                                          I 4 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                      547 45 -     43241 -----------------------------------CTCACT-C-A-GT----C-CA-CCCAAC---C-------------------ACCGTTTGCAATGTAATCC-AC-TT-T--C
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 4 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9035242 45 -   9314153 -----------------------------------CTCACT-C-A-GT----C-CA-CCCAAC---C-------------------ACCGTTTGCAATGTAATCC-AC-TT-T--C
i Canis_lupus_dingo.QKWQ01000480.1                       I 4 C 0
s Canis_lupus_familiaris.chr16                            17959718 45 -  59632846 -----------------------------------CTCACT-C-A-GT----C-CA-CCCAAC---C-------------------ACCGTTTGCAATGTAATCC-AC-TT-T--C
i Canis_lupus_familiaris.chr16                           I 4 C 0
s Canis_lupus_orion.HG994398.1                            18501015 45 +  63665305 -----------------------------------CTCACT-C-A-GT----C-CA-CCCAAC---C-------------------ACCGTTTGCAATGTAATCC-AC-TT-T--C
i Canis_lupus_orion.HG994398.1                           I 4 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1634 50 -     12242 CT---------------------G---C-----T-TCA-CT-C---G-----C-CA-GCTATC-TCC-T-----------------GCTGCTTCTAGCATCATTT-TC-TC-T--C
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5754 21 -     11696 ------------------------------------------------------------------------------------------TTTCTAATGCAGTAG-TC-AC-T--G
i Carollia_perspicillata.CarPer_scaffold_92756           I 21 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137718 53 +    179628 TT---------------------T---C-----CTTCA-CT-C-A-GT----T-CC-TCTAAC-TGTG------------------GCTGCTTCTAAAAGAATCC-TC-TT-C--C
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     93707 24 +    217609 ---------------------------------------------------------------------------------------ctgtttctaatgtaatcc-tc-ct-t--t
i Catagonus_wagneri.CatWag_scaffold_2839                 I 12 C 0
s Cebuella_niveiventris.k141_1251222                         10787 50 -     11392 TT---------------------T---GT----C-TCA-CT-C-G-GT----C-CA-TGTAAC---T-------------------TCCACTTCTAATGTAATTCCTT-TT-T---
i Cebuella_niveiventris.k141_1251222                     C 0 I 1
s Cebuella_pygmaea.k141_1309012                               6971 50 -      7577 TT---------------------T---GT----C-TCA-CT-C-G-GT----C-CA-TGTAAC---T-------------------TCCACTTCTAATGTAATTCCTT-TT-T---
i Cebuella_pygmaea.k141_1309012                          C 0 I 1
s Cebus_albifrons.Contig27                                25653418 23 +  26074798 ---------------------------GT----C-TCA-CT-G-G-GT----C-TG-TCCAAC---T-------------------T-----------------------------
i Cebus_albifrons.Contig27                               I 2 I 2
s Cebus_olivaceus.k141_1764483                                1356 23 +     28840 ---------------------------GT----C-TCA-CT-G-G-GT----C-TG-TCCAAC---T-------------------T-----------------------------
i Cebus_olivaceus.k141_1764483                           I 2 I 2
s Cebus_unicolor.k141_1837183                                 1081 23 +     14051 ---------------------------GT----C-TCA-CT-G-G-GT----C-CG-TCTAAC---T-------------------T-----------------------------
i Cebus_unicolor.k141_1837183                            I 2 I 2
s Ceratotherium_simum.JH767749.1                          12232091 34 +  27778364 ------------------------------------------------------cc-tctaac---c-------------------actgcttctaacgtaatcc-tc-tt-t--c
i Ceratotherium_simum.JH767749.1                         I 14 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3118 34 -     25243 ------------------------------------------------------cc-tctaac---c-------------------actgcttctaacgtaatcc-tc-tt-t--c
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 14 C 0
s Cercocebus_atys.KQ010504.1                               4476308 51 +   4669795 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAAttc-tt-ta-t--t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                         810 51 +     17872 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           1467 51 -     14043 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9500 51 +     27781 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         9668 51 -     20310 TT---------------------TT--GT----C-TGA-CT-C-A-GT----C-TA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          12648 51 +     29689 TT---------------------TT--GT----C-TGA-CT-C-A-GT----C-TA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7408 37 -     20078 ----------------------------------------------GT----C-TA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Cercopithecus_diana.k141_1150327                       I 10 C 0
s Cercopithecus_hamlyni.k141_187466                          15316 51 -     27936 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-TA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--C
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            4196 37 -     17152 ----------------------------------------------GT----C-TA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Cercopithecus_lowei.k141_1854285                       I 10 C 0
s Cercopithecus_albogularis.ctg5                                38817727 51 +  39242232 TT---------------------TT--GT----C-TGA-CT-C-A-GT----C-TA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223416 51 -  21565898 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-TA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40535 51 -     53127 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-TA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                         786 51 +     13442 TT---------------------TT--GT----C-TGA-CT-C-A-GT----C-TA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15335 51 -     27947 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-TA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         15311 51 +     17596 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-TA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          1368 37 +     14005 ----------------------------------------------GT----C-TA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Cercopithecus_roloway.k141_2581234                     I 10 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1117 47 -      8501 TT---------------------C---A-----T-CTCAGC-C-A-GT----C-CA-TCTGAC---C-------------------ACTGCTTCTGTGTTAATCC-TC-T------
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             21688 50 -     52598 TT---------------------T---GC----C-TCT-CT-C-A-GT----C-CA-TCCAAC---C-------------------ACTGCTTCTAGTGTAAATC-GT-TT-T--C
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           17055 50 +     57038 TT---------------------T---GC----C-TCT-CT-C-A-GT----C-CA-TCCAAC---C-------------------ACTGCTTCTAGTGTAAATC-AT-TT-T--C
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1253513 46 +   2543920 -----------------------------------TCG-TT-C-A-G-----C-CC-ACTACC-TGC-T-----------------GCTGTTTCTAACATAATAA-TC-TT-T--C
i Chinchilla_lanigera.JH722012.1                         I 4 C 0
s Chlorocebus_aethiops.ctg25                              18429295 51 -  18827391 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-TA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15732 50 -     50209 TT---------------------T---GT----C-TCA-CT-C-A-GT----C-TA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422732 51 + 135778131 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-TA-TCTAAC---T-------------------TCCATTTCTAATGTAAttc-tt-ta-t--t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 18939 46 +     19366 TT---------------------T---G-----T-CTCAC--C-A-GT----C-CA-TCTAAC---C-------------------ACTGCTTCTAATTTAATCC-TC-G------
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            174016 44 +    839153 TT---------------------T---G-----T-CTCAC--C-A-GT----C-CA-TCTAAC---C-------------------ACTGCT--TAATTTAATCC-TT-G------
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1911208 51 +   2368649 TT---------------------TT--GT----C-TCA-CT-C-A-GT----T-CA-TCTAAC---T-------------------TCCATTTCTAATGTAAttc-tt-ta-t--t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949460 51 + 200372422 TT---------------------TT--GT----C-TCA-CT-C-A-GT----T-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37742 51 +     84244 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17548667 50 -  53390261 TT---------------------T---G-----C-CTCA-T------TCAGTC-CA-TTTAAC---T-------------------GCTGCCTCTAACATCGTTc-tc-tt-t--c
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          15034 49 -     20389 -T---------------------T---G-----C-CTC-CT-T-C-AG--G-C-CA-TGTAGC---C-------------------ACGGCTTCTAATGTAATCC-TC-TT-T--C
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 50656 35 +     63868 ----------------------------------------------------------ctcaactgc------------------agctgcttctaatataatcc-tc-tt-t--t
i Cricetomys_gambianus.CriGam_scaffold_18520             I 14 C 0
s Cricetulus_griseus.LT883664.1                           11668178 35 + 224834208 ----------------------------------------------------------TCCAACTGTG------------------GCTGCTTTTACTGTAGTCT-TC-TT-T--C
i Cricetulus_griseus.LT883664.1                          I 17 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               3604 31 -     19598 ----------------------------------------------------------TAGCC---A-------------------ATCACTTCTAAAGTAACCC-AC-TT-T--C
i Crocidura_indochinensis.CroInd_scaffold_37019          I 12 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29122 45 -     87169 -----------------------------------CTGACT-C-A-AT----C-CA-TCCAGG---C-------------------ACTGCTTGTAACATAATAC-TC-TT-T--C
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 4 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837703 52 +   1526836 TT---------------------G---C-----C-TCA-CG-C-G-AT----C-CT-TCTCAAC-GC-T-----------------GCTGCCACTAACACAGTCC-TC-TC-A--C
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  36506 51 +     51376 CT---------------------G---C-----T-TCA-CT-C-A-G-----C-GA-GCTACC-TCC------C------------ACTGCTTCTAGTGTCAACT-TC-TT-T--C
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            64139 43 +   2246927 TT---------------------T---G-----T-CTCA-------GT----C-CA-TCTACC---C-------------------GCTGCTTCTAATTTAATCC-TC-T------
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537891 50 -  12879189 ct---------------------t---gc----c-tct-cc-c-a-gt----c-ca-tctggc---c-------------------actgcttctagtataaatc-tt-tt-t--c
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630769 21 +  20541912 ------------------------------------------------------------------------------------------TTTCTAACGCAATCA-TC-AT-T--G
i Desmodus_rotundus.KZ672289.1                           I 20 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673940 34 +   1390856 ------------------------------------------------------cc-tctaac---c-------------------actgcttctaacgtaatcc-tc-tt-t--c
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 14 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6691 34 +    198055 ------------------------------------------------------cc-tctaac---c-------------------actgcttctaacgtaatcc-tc-tt-t--c
i Diceros_bicornis.DicBicMic_scaffold_5955               I 14 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    36992 46 +     67921 -----------------------------------TCA-CT-C-A-G-----T-CC-ACTAAC-TGC-T-----------------GCCGTTTCTAACATAATTC-TC-TC-T--C
i Dinomys_branickii.DinBra_scaffold_21862                I 4 C 0
s Echinops_telfairi.JH980293.1                            48781193 47 + 111700974 TT---------------------G---G-----C-ACA-TT-C-A-GT----C-CA-TCTAAC---C-------------------ACTGATTTTAATTCAACAt-tc-tt-----
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.KE759718.1                                  11147 49 +     11740 -T---------------------T---A-----C-CTCAGT-C---AG-A--T-CA-TCTAGC---C-------------------ACTGCTCCTAATGTAATCc-tc-tt-t--c
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1098349 50 +  10337057 TT---------------------T--GT-----G-CCT-CT-C-A-GT----T-CA-TCTAAC---C-------------------CCTGTTTTTAATTCACCTC-TC-TT-T--A
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          21129 35 -    110024 ----------------------------------------------------------TCCAACTGTG------------------GCTGCTTCTAATGTGATCC-TC-TT-T--C
i Ellobius_lutescens.LOEQ01008920.1                      I 17 C 0
s Ellobius_talpinus.LOJH01081419.1                            1033 35 +      8657 ----------------------------------------------------------TCCAACTGTG------------------GCTGCTTCTAATGTAATCC-TC-TT-T--C
i Ellobius_talpinus.LOJH01081419.1                       I 17 C 0
s Enhydra_lutris.KZ291758.1                               16329939 41 -  41312741 -----------------------------------CT--C----A-AT----C-TG-TCCAAC---T-------------------ATTGCTTCCAGTGTTATCC-GC-TT-T--C
i Enhydra_lutris.KZ291758.1                              I 4 C 0
s Eptesicus_fuscus.JH977646.1                              2146373 21 -  14770903 ------------------------------------------------------------------------------------------TTTCTAATGGAATGT-AC-TT-T--C
i Eptesicus_fuscus.JH977646.1                            I 20 C 0
s Equus_asinus.JREZ01000139.1                              1284189 45 +   4378816 -----------------------------------ttcact-c-a-gt----c-ca-cctaac---t-------------------actgcttctaacgcaatcc-tc-tt-t--c
i Equus_asinus.JREZ01000139.1                            I 4 C 0
s Equus_caballus.CM000403.2                               18532009 45 -  39960074 -----------------------------------ttcact-c-a-gt----c-ca-cctaac---t-------------------actgcttctaacgcaatcc-tc-tt-t--c
i Equus_caballus.CM000403.2                              I 4 C 0
s Equus_przewalskii.KK951119.1                               34038 45 +    498745 -----------------------------------ttcact-c-a-gt----c-ca-cctaac---t-------------------actgcttctaacgcaatcc-tc-tt-t--c
i Equus_przewalskii.KK951119.1                           I 4 C 0
s Erinaceus_europaeus.JH835339.1                           3328876 46 -   7059049 ---------------------------------C-CTC--T---T--TCAACC-CA-TCTAGC---C-------------------ACAActtctgatttagtct-tc-tt-t--c
i Erinaceus_europaeus.JH835339.1                         I 3 C 0
s Erythrocebus_patas.Contig38                             21205900 51 -  21539334 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_576796                              40735 50 -     44621 TT---------------------T---GC----C-TCT-CT-C-A-GT----C-CA-TCTAAC---C-------------------ACTGCTTCTAGTGTAAATC-AT-TT-C--C
i Eulemur_albifrons.k141_576796                          C 0 C 0
s Eulemur_collaris.k141_377015                                7116 50 -     16928 TT---------------------T---GC----C-TCT-CT-C-A-GT----C-CA-TCTAAC---C-------------------ACTGCTTCTAGTGTAAATC-AT-TT-C--C
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              16148 50 -     25546 TT---------------------T---GC----C-TCT-CT-C-A-GT----C-CA-TCTAAC---C-------------------ACTGCTTCTAGTGTAAATC-AT-TT-C--C
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            13344 50 +     26330 TT---------------------T---GC----C-TCT-CT-C-A-GT----C-CA-TCTAAC---C-------------------ATTGCTTCTAGTGTAAATC-AT-TT-C--C
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14579 50 +     23973 TT---------------------T---GC----C-TCT-CT-C-A-GT----C-CA-TCTAAC---C-------------------ACTGCTTCTAGTGTAAATC-AT-TT-C--C
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                13341 50 +     75513 tt---------------------t---gc----c-tct-ct-c-a-gt----c-ca-tctaac---c-------------------attgcttctagtgtaaatc-at-tt-c--c
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 11271 50 +     97555 tt---------------------t---gc----c-tct-ct-c-a-gt----c-ca-tctaac---c-------------------actgcttctagtgtaaatc-at-tt-c--c
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              763 50 +     13026 tt---------------------t---gc----c-tct-ct-c-a-gt----c-ca-tctaac---c-------------------actgcttctagtgtaaatc-at-tt-c--c
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4815 50 -     17153 TT---------------------T---GC----C-TCT-CT-C-A-GT----C-CA-TCTAAC---C-------------------ACTGCTTCTAGTGTAAATC-AT-TT-C--C
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              14388 50 +    111500 tt---------------------t---gc----c-tct-ct-c-a-gt----c-ca-tctaac---c-------------------actgcttctagtgtaaata-at-tt-c--c
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237595 25 + 206538554 --------------------------------------------------------------------------------------ACTGCTTGTAATGTAATCC-TC-TT-T--C
i Felis_catus.CM001381.2                                 I 20 C 0
s Felis_catus_fca126.CM031415.1                           20196438 25 + 205367284 --------------------------------------------------------------------------------------ACTGCTTGTAATGTAATCC-TC-TT-T--C
i Felis_catus_fca126.CM031415.1                          I 20 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 10191 25 -     36744 --------------------------------------------------------------------------------------ACTGCTTGTAATGTAATCC-TC-TT-T--C
i Felis_nigripes.FelNig_flattened_line_20823             I 20 C 0
s Fukomys_damarensis.KN121974.1                             851035 52 +   3816255 TT---------------------G---C-----C-TCA-CG-C-A-G-----TCCT-GCTAAC-TGC-T-----------------GCTGCTTCTAGTGCAATCC-TC-AT-T--C
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg2040                                     427211 50 -    453645 TT---------------------T---GC----C-TCT-CT-C-A-CT----C-TA-TCTGAC---C-------------------ACTGCTTCTAATGTAAATC-CT-TT-T--C
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4901 50 +     11339 TT---------------------T---GC----C-TCT-CT-C-A-CT----C-TA-TCTGAC---C-------------------ACTGCTTCTAATGTAAATC-CT-TT-T--C
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            2199 50 +     41679 TT---------------------T---GC----C-TCT-CT-C-A-CT----C-TA-TCTGAC---T-------------------GCTGCTTCTAATGTAAATC-TT-TT-T--C
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1826 41 -      9135 -------------------------------------A-C--C-C-GT----C-TA-TCTAAC---C-------------------ACTGCTTCTCATGTAATCC-TC-TC-T--C
i Galeopterus_variegatus.GalVar_scaffold_108840          I 1 C 0
s Glis_glis.GliGli_scaffold_19807                            31992 50 +     49224 TT---------------------A---C-----C-TC--CT-C-A-GT----C-CC-TCTA-AC-AC-T-----------------GCTGCTTTTAATGTAGTCC-TCCT--T--C
i Glis_glis.GliGli_scaffold_19807                        I 1 C 0
s Gorilla_beringei.k141_3596273                              16703 47 -     32273 TT---------------------TT--GT----C-TCA--------GT----C-CA-TCTAAC---T-------------------TCTATTTCTAATGTAATTC-TT-TA-T--T
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186338839 47 + 186649187 TT---------------------TT--GT----C-TCA--------GT----C-CA-TCTAAC---T-------------------TCTATTTCTAATGTAAttc-tt-ta-t--t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33256 25 +     78134 --------------------------------------------------------------------------------------ACTGCTTTTAATATAACCC-TCCT--T--C
i Graphiurus_murinus.GraMur_scaffold_10447               I 17 C 0
s Hapalemur_alaotrensis.k141_170648                           7443 50 -     19426 TT---------------------T---GC----C-TCT-CT-C-A-GT----C-CA-TCTAAC---C-------------------ACTGCTTCTAGTGTAAATC-AT-TT-C--C
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12596 50 -     15286 TT---------------------T---GC----C-TCT-CT-C-A-GT----C-CA-TCTAAC---C-------------------ACTGCTTCTAGTGTAAATC-AT-TT-C--C
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             14235 50 +     18253 TT---------------------T---GC----C-TCT-CT-C-A-GT----C-CA-TCTAAC---C-------------------ACTGCTTCTAGTGTAAATC-AT-TT-C--C
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         14336 50 -     41752 TT---------------------T---GC----C-TCT-CT-C-A-GT----C-CA-TCTAAC---C-------------------ACTGCTTCTAGTGTAAATC-AT-TT-C--C
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         14173 50 -     16460 TT---------------------T---GC----C-TCT-CT-C-A-GT----C-CA-TCTAAC---C-------------------ACTGCTTCTAGTGTAAATC-AT-TT-C--C
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               242959 45 +    327341 -----------------------------------CTCA-TGC-G-AC----T-CA-TCCAGG---C-------------------ACCTCTTGTAACGTAATCC-TC-TT-T--C
i Helogale_parvula.HelPar_flattened_line_2585            I 4 C 0
s Heterocephalus_glaber.JH602082.1                        20662793 52 +  22651954 TT---------------------G---A-----C-TCA-CT-C-A-G-----TCCT-GCTAAC-TGC-T-----------------GCTGCTTCTAATGTAATCC-CC-AT-T--C
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1514 50 +      7595 GC---------------------T---G-----C-C-CGCT-C-A-GT----C-TA-CCTAAC---C-------------------ACTGCTTCTGATTTCACCC-TC-TTTT--A
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       111173  4 +   1711038 -------------------------------------------------------------------------------------------------------------tt-t--t
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               42604  4 +     43066 -------------------------------------------------------------------------------------------------------------TT-T--T
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    435500 51 +    630532 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-TA-TCTAAC---T-------------------TCTATTTCTAATGTAATTC-TT-TA-T--T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45662 45 +     55795 -----------------------------------CTCTCC-C-A-AT----C-CA-TCCAGA---C-------------------ACTGCTTGTAATGTAATCC-TC-TT-T--C
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 4 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83691 51 +    135385 TT---------------------G---C-----C-TCA-CT-T-G-GT----C-CC-ACTAAC-TGC-T-----------------GCTGTTTCTA-TGTGATCC-TC-TT-T--C
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7521505 50 -   7955117 TT---------------------G---C-----C-TCA-CT-C-A-GT----C-TC-CCTAACC-AC-T-----------------GCTGCTGTTAATGTAATTC--C-T--t--c
i Ictidomys_tridecemlineatus.JH393364.1                  I 1 C 0
s Indri_indri.k141_3655594                                   23133 50 +     31101 tt---------------------t---gc----c-tct-ct-c-a-gt----c-ca-tctaac---c-------------------actgcttctagtgtaaatc-tt-tt-t--c
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8277538 30 -   9596543 ----------------------------------------------------------CCCAACTGT-T-----------------GCTGCTTCTAACATAatct-t---------
i Jaculus_jaculus.JH725527.1                             I 13 I 2
s Lasiurus_borealis.LasBor_scaffold_32767                    17023 21 -     42476 ------------------------------------------------------------------------------------------TGCCTAAAGTAATAT-TC-TT-T--C
i Lasiurus_borealis.LasBor_scaffold_32767                I 20 C 0
s Lemur_catta.scaffold_24                                 15524688 50 -  30322482 tt---------------------t---gc----c-tct-ct-c-a-gt----c-ca-tctaac---c-------------------attgcttctagtgtaaatc-at-tt-c--c
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        8625 50 +     64341 TT---------------------C---AT----C-TCA-CT-C-G-GT----C-CA-TCTAAC---T-------------------TCCACTTCTAATGTAGTTCCTT-TT-T---
i Leontocebus_fuscicollis.k141_1820339                   C 0 I 1
s Leontocebus_illigeri.k141_1304848                            965 50 -     35062 TT---------------------C---AT----C-TCA-CT-C-G-GT----C-CA-TCTAAC---T-------------------TCCACTTCTAATGTAGTTCCTT-TT-T---
i Leontocebus_illigeri.k141_1304848                      C 0 I 1
s Leontocebus_nigricollis.k141_4610752                        8652 50 +     35603 TT---------------------C---AT----C-TCA-CT-C-G-GT----C-CA-TCTAAC---T-------------------TCCACTTCTAATGTAGTTCCTT-TT-T---
i Leontocebus_nigricollis.k141_4610752                   C 0 I 1
s Leontopithecus_chrysomelas.k141_1519602                    30265 50 +     38576 TT---------------------T---GT----C-TCA-CT-T-G-GT----C-CA-TCTAAC---T-------------------TCCACTTCTAATGTAATTTCTT-TT-T---
i Leontopithecus_chrysomelas.k141_1519602                C 0 I 1
s Leontopithecus_rosalia.k141_464620                         26969 50 +     66356 TT---------------------T---GT----C-TCA-CT-T-G-GT----C-CA-TCTAAC---T-------------------TCCACTTCTAATGTAATTTCTT-TT-T---
i Leontopithecus_rosalia.k141_464620                     C 0 I 1
s Lepilemur_ankaranensis.k141_596936                         11586 30 -     23766 -----------------------------------------------------------CAAC---C-------------------ACTGCTTCTAGTGTAAATC-TT-TT-T--C
i Lepilemur_ankaranensis.k141_596936                     I 8 C 0
s Lepilemur_dorsalis.k141_577674                             29647 30 +     45836 -----------------------------------------------------------CAAC---C-------------------ACTGCTTCTAGTGTAAATC-TT-TT-T--C
i Lepilemur_dorsalis.k141_577674                         I 8 C 0
s Lepilemur_ruficaudatus.k141_121139                          2185 30 +     25010 -----------------------------------------------------------CAAC---C-------------------ACTGCTTCTAGTGTAAATC-TT-TT-T--C
i Lepilemur_ruficaudatus.k141_121139                     I 8 C 0
s Lepilemur_septentrionalis.k141_185316                      27579 30 +     54090 -----------------------------------------------------------CAAC---C-------------------ACTGCTTCTAGTGTAAATC-TT-TT-T--C
i Lepilemur_septentrionalis.k141_185316                  I 8 C 0
s Leptonychotes_weddellii.KB714746.1                       3043681 45 +   3914936 -----------------------------------CTCACT-C-A-AT----C-CA-TCCCAC---T-------------------ACTGCTTGCAATGTCATCT-AC-TT-T--C
i Leptonychotes_weddellii.KB714746.1                     I 4 C 0
s Lepus_americanus.LepAme_scaffold_107385                     7107 47 -     14121 TT---------------------T---G-----C-ACC-C--C-GGGC-A--C-CC-ATCCATCT-C-------------------ACTGCTGCTA-----ATCC-TA-TT-T--C
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437851 51 +   1826925 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            6459 50 +     11245 TT---------------------T---GC----C-TCT-CT-T-A-CT----C-TA-TCTGAC---C-------------------ACTGCTTGTAATGTAAATC-TT-TT-T--C
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1005280 50 +   6120653 TT---------------------T---GC----C-TCT-CT-T-A-CT----C-TA-TCTGAC---C-------------------ACTGCTTGTAATGTAAATC-TT-TT-T--C
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4217952 69 -  43346337 TT---------------------C---G-----C-CTC-CA-A-AATT----A-TA-TATAGC---TGTTTAACCTAGAAAGTGCCAGAATTTCTAATTTAACCc-tc-tt-t--a
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17955958 45 -  59628241 -----------------------------------CTCACT-C-A-GT----C-CA-CCCAAC---C-------------------ACCGTTTGCAATGTAATCC-AC-TT-T--C
i Lycaon_pictus.CM007581.1                               I 4 C 0
s Macaca_arctoides.k141_2326796                               7666 51 +     40492 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-C--T
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59676925 51 +  60120075 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13441 51 -     26193 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            81225 51 -    114318 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  6912 51 -     23192 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16385 51 -     29190 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  24950 51 +     37952 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186840039 51 + 187317192 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAAttc-tt-ta-t--t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458602 51 -  25927173 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAAttc-tt-ta-t--t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  80798 51 +     89720 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 7799 51 +     20474 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   7599 51 -     14993 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  330465 51 -    668171 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 5912 51 -     24072 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26537 51 -     45290 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91241 49 +     94391 -t---------------------t---g-----c-ctc-ag-t-c-ag---gc-ca-tctagc---c-------------------actgctcctaatgtaatcc-tc-tt-c--c
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23938128 51 -  24302211 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352250 51 +    752769 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33103702 50 -  40650429 TT---------------------G---C-----C-TCA-CT-C-A-GT----C-TC-CCTAACC-AC-T-----------------GCTGCTGTTAATGTAATCC--C-T--T--C
i Marmota_marmota.CZRN01000018.1                         I 1 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        11065 45 -    207569 -C---------------------T---G-----C-CTCACT-C---AG---TC-TA-TCTAGC---C-------------------ACTACTTCTAATGTAATCC-TC--------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 2884
s Mellivora_capensis.MelCap_flattened_line_69365             10674 45 +     13704 -----------------------------------CTCACT-C-A-AT----C-CA-TCCAAC---T-------------------ATTACTTCCAGTGTTATTC-GC-TT-T--C
i Mellivora_capensis.MelCap_flattened_line_69365         I 4 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 33364 35 +    140813 ----------------------------------------------------------TCCAACTGTG------------------GCTGCTTCTAATGTAATCC-TC-TT-T--C
i Meriones_unguiculatus.MerUng_scaffold_7390             I 11 C 0
s Mesocricetus_auratus.KB708134.1                         12182834 35 -  29670104 ----------------------------------------------------------TCCAACTGTG------------------GCTGCTTCTAATGTAGTCT-TC-TT-T--C
i Mesocricetus_auratus.KB708134.1                        I 17 C 0
s Mico_argentatus.k141_1239457                                6783 50 -      7380 TT---------------------T---GC----C-TCA-CT-T-G-GT----C-CA-TGTAAC---T-------------------TCCACTTCTAATGTAATTCCTT-TT-T---
i Mico_argentatus.k141_1239457                           C 0 I 1
s Mico_schneideri.k141_1950671                                      6756 50 -      7356 TT---------------------T---GC----C-TCA-CT-T-G-GT----C-CA-TGTAAC---T-------------------TCCACTTCTAATGTAATTCCTT-TT-T---
i Mico_schneideri.k141_1950671                                 C 0 I 1
s Microcebus_murinus.CM007674.1                           18292114 50 -  93316391 TT---------------------T---GC----C-TCT-CT-C-A-GT----C-CA-TCCAAC---C-------------------ACTGCTTCTAGTGTAAatc-tt-tt-t--c
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    22899 68 -    145209 TGGCTTCCCAACCTCAAATGCAGG---G-----C-ACA-CT-C-A-GT----C-CA-CATAAC---C-------------------AATACTTTTAACTTAACCT-TC-TT-----
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                16293 21 -     19307 ------------------------------------------------------------------------------------------TTTCTAATGCAATAT-TC-AC-C--A
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 20 C 0
s Microtus_ochrogaster.CM001695.1                         11261082 35 -  27267610 ----------------------------------------------------------TCCAACTGTG------------------GCTGCTTCTAATGTAATCC-TC-TT-T--C
i Microtus_ochrogaster.CM001695.1                        I 17 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1851249 17 +   8254450 ------------------------------------------------------------------------------------------TTTCTAATGTAACGC-TC--------
i Miniopterus_natalensis.LDJU01000034.1                  I 20 I 2
s Miniopterus_schreibersii.MinSch_scaffold_18080             34929 17 +     64694 ------------------------------------------------------------------------------------------TTTCTAATGTAACAC-TC--------
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 20 I 2
s Miopithecus_ogouensis.k141_534055                           9834 51 -     28506 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6549 45 -      8324 -----------------------------------CTCACT-C-A-AT----C-CA-ACTAAC---T-------------------ACTGCTTGCAATGTCATCT-AC-TT-T--C
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 4 C 0
s Mirza_zaza.k141_952172                                      9658 50 -     37649 TT---------------------T---GC----C-TCT-CT-C-A-GT----C-CA-CCCAAC---C-------------------ACTGTTTCTAGTGTAAATC-TT-TT-T--C
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142291 21 -    366855 ------------------------------------------------------------------------------------------TTTCTAATGTAATAC-TC-AT-T--C
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 20 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   36058 45 +     37127 -----------------------------------CTCA-TGC-G-AC----C-CA-TCCAGA---C-------------------ACCACTTGTAACCTAATCC-TC-TT-T--C
i Mungos_mungo.MunMun_flattened_line_23663               I 4 C 0
s Murina_feae.MurFea_scaffold_85699                           7477 21 +     14753 ------------------------------------------------------------------------------------------TTTCTAATGTAATAT-TC-TT-T--C
i Murina_feae.MurFea_scaffold_85699                      I 20 C 0
s Mus_caroli.LT608237.1                                   84361979 35 - 120012414 ----------------------------------------------------------TCCAACTGTG------------------GCTGTTTCTAATGCTATTC-TT-TT-T--C
i Mus_caroli.LT608237.1                                  I 11 C 0
s Mus_musculus.chr8                                       87650972 35 - 129401213 ----------------------------------------------------------TCCAACTATG------------------GCTGCTTCTAATGCAATCC-TT-TT-T--C
i Mus_musculus.chr8                                      I 11 C 0
s Mus_pahari.LT608297.1                                   31355629 35 -  89631738 ----------------------------------------------------------TCCAACTGTG------------------GCTGCTTCTAATGCAATCC-TT-TT-T--C
i Mus_pahari.LT608297.1                                  I 11 C 0
s Mus_spretus.CM004101.1                                  90753035 35 - 130317789 ----------------------------------------------------------TCCAACTATG------------------GCTACTTCTAATGCAATCC-TT-TT-T--C
i Mus_spretus.CM004101.1                                 I 11 C 0
s Mustela_putorius.JH418006.1                               302086 45 -  14710649 -----------------------------------CTCACT-C-A-AT----C-CA-TCCAAC---T-------------------ATTGCTTCCAATGTTATCC-GC-TT-T--C
i Mustela_putorius.JH418006.1                            I 4 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71821 51 -     80779 CT---------------------G---C-----T-TCA-CT-C-A-G-----A-CA-GCTACC-TCC-T-----------------GCTGCTTCCAGCATTATCT-TG-TT-T--C
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                281112 21 -  10118263 ------------------------------------------------------------------------------------------TTTCTAATGTAATAT-TC-TT-T--C
i Myotis_brandtii.KE162005.1                             I 20 C 0
s Myotis_davidii.KB100139.1                                1588368 21 -   6019432 ------------------------------------------------------------------------------------------TTTCTAATGTAATAT-TC-TT-T--C
i Myotis_davidii.KB100139.1                              I 20 C 0
s Myotis_lucifugus.GL429869.1                              3904464 21 -   4330536 ------------------------------------------------------------------------------------------TCTCTAATGTAATAT-TC-TT-T--C
i Myotis_lucifugus.GL429869.1                            I 20 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                         615 21 +      1835 ------------------------------------------------------------------------------------------TTTCTAATGTAATAT-TC-TC-T--C
i Myotis_myotis.MyoMyo_scaffold_281845                   I 20 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189892 47 +    196477 GT---------------------T---G-----C-CTCACC-C-A-GT----T-TA-TGTAAC---C-------------------CCTGCTTCTAATTTAACCC-TT-T------
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2034684 29 -   3037898 ----------------------------------------------------------CTCTGCTGTG------------------GCTCCTTCTAATACAACCC-----------
i Nannospalax_galili.KL204047.1                          I 12 I 4
s Nasalis_larvatus.k141_413338                               15836 51 +     21681 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308135 45 +  31847680 -----------------------------------CTCACT-C-A-AG----C-CA-TCCAAC---T-------------------ACTGCTTGCAATGTCATCT-AC-TT-T--C
i Neomonachus_schauinslandi.NINY01007730.1               I 4 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    758526 21 +    783361 ------------------------------------------------------------------------------------------TTTCTAGTGTGATTC-TC-AT-T--A
i Noctilio_leporinus.NocLep_scaffold_251                 I 20 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150021 45 -   9404916 -----------------------------------CCCACT-C-A-GT----C-CA-CCCAAC---C-------------------ACCGTTTGCAATGTAATCC-AC-TT-T--C
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 4 C 0
s Nycticebus_bengalensis.LG01                            102586824 50 - 196305487 TT---------------------T---GC----C-TCT-CT-C-A-CT----C-TA-TCTGAC---C-------------------ACTGCTTCTAATGTAACTC-TT-TT-T--C
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              748 50 +      2075 TT---------------------T---GC----C-TCT-CT-C-A-CT----C-TA-TCTGAC---C-------------------ACTGCTTCTAATGTAACTC-TT-TT-T--C
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105762179 50 + 199412804 TT---------------------T---GC----C-TCT-CT-C-A-CT----C-TA-TCTGAC---C-------------------ACTGCTTCTAATGTAACGC-TT-TT-T--C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1364480 51 +   3988456 TT---------------------T---G-----C-ACC-GT-G-G-GT----C-CC-ATCCATCT-C-------------------ATTGCTACTAATGCAATCC-TA-TT-T--C
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  747562 51 +  11899542 CT---------------------G---C-----T-TCA-CT-C-A-G-----C-CA-GCTACC-TCC------C------------ACTGCTTCTAGCGTCATCT-TC-TT-T--C
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                              507277 45 -   2017862 -----------------------------------CTCACT-C-A-AT----C-CA-TCCAAC---T-------------------ACTGCTTGCAATGTCATcc-at-tt-t--c
i Odobenus_rosmarus.KB229312.1                           I 4 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   25760 35 +     28053 ----------------------------------------------------------TCCAACTGTG------------------GCTGCTTCTAATGTACTCC-TC-TT-T--C
i Ondatra_zibethicus.OndZib_scaffold_46174               I 17 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    80762 35 +    102263 ----------------------------------------------------------TCCAACTGTG------------------GCTGCCTCTAATGTAATCC-TC-TT-T--C
i Onychomys_torridus.OnyTor_scaffold_2986                I 17 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387              10732 49 -     18566 TT---------------------T---C-----C-CTA-CT-C-A-GT----C-CA-TCTAAC---C-------------------ACTTCTTCTAGTTTAATTC-TC-TT-T--A
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67147967 47 + 174332312 TT---------------------T---G-----C-ACC-C--C-GGGC-A--C-CC-ATCCATCT-C-------------------ACTGCTGCTA-----ATCc-ta-tt-t--c
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       462970 45 -    559221 -----------------------------------TTCACT-C-A-GT----C-CA-CCCAAC---C-------------------ACGGTTTGCAATGTAATCC-AC-GT-T--C
i Otocyon_megalotis.JAEUCK010005147.1                    I 4 C 0
s Otolemur_crassicaudatus.k141_222918                         4731 50 +      8798 TT---------------------T---GC----C-TCT-CT-C-A-CT----C-TA-TCTGAC---C-------------------ACTGCTTCTAATGTAAATC-TT-TT-T--C
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696894 50 -   1103335 TT---------------------T---GC----C-TCT-CT-C-A-CT----C-TA-TCTGAC---C-------------------ACTGCTTCTAATGTAAatc-tt-tt-t--c
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    44791 47 +     80009 TT---------------------TT--GT----C-TCA--------GT----T-CA-TCTAAC---T-------------------TCTATTTCTAATGTAAttc-tt-ta-t--t
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189143690 47 + 189151597 TT---------------------TT--GT----C-TCA--------GT----C-CA-TCTAAC---T-------------------TCTATTTCTAATGTAAttc-tt-ta-t--t
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  151801 25 +    230217 --------------------------------------------------------------------------------------ACTGCTTGTAATGTAATCC-TC-TT-T--C
i Panthera_onca.PanOnc_flattened_line_3271               I 20 C 0
s Panthera_pardus.KV860321.1                                265010 25 +  18783137 --------------------------------------------------------------------------------------ACTGCTTGTAATGTAATCC-TC-TT-T--C
i Panthera_pardus.KV860321.1                             I 20 C 0
s Panthera_tigris.KE722367.1                               4721889 25 -   8748460 --------------------------------------------------------------------------------------ACTGCTTGTAATGTAATCC-TC-TT-T--C
i Panthera_tigris.KE722367.1                             I 20 C 0
s Papio_anubis.CM001495.2                                183443928 51 + 183742232 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAAttc-tt-ta-t--t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7574 51 +     20448 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20564386 51 +  20919399 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6318 51 +     41871 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     9611 51 +     27711 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                   608 51 -     11374 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13282 45 -     78924 -----------------------------------CTCACT-C-A-TT----C-CA-TCCAGC---C-------------------ACTGCTTGTAATGTAATCC-TC-TT-T--C
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 4 C 0
s Perodicticus_ibeanus.k141_855320                           10718 50 +     13100 TT---------------------T---GC----C-TCT-CT-C-A-CT----C-TA-TCTGAC---C-------------------ACTGCTTCTAATGTAAATC-TT-TT-T--C
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             9112 50 +     25941 TT---------------------T---GC----C-TCT-CT-C-A-CT----C-TA-TCTGAC---C-------------------ACTGCTTCTAATGTAAATC-TT-TT-T--C
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18195385 35 -  18517816 ----------------------------------------------------------TCCAACTGTG------------------ACTGACTCTAATGTAATCC-TC-TT-T--C
i Peromyscus_maniculatus.KI615324.1                      I 17 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28702 52 -     29689 GT---------------------G---C-----C-TTG-CC-C-A-G-----TAGT-GCTAAC-TGC-T-----------------GCTGCTTCTAATATAATCC-TC-AT-T--C
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Piliocolobus_badius.k141_1234363                           44327 51 +     62158 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-CA-T--T
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        39074 51 +     89929 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-CG-T--T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40490 51 +     51399 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-CG-T--T
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296728 51 -  14605196 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-CG-T--T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2414 21 +     22620 ------------------------------------------------------------------------------------------TTTCTAATGTAATAT-TC-TT-T--C
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 20 C 0
s Pongo_abelii.CM009266.2                                189131831 51 + 189387572 TT---------------------TT--GTCTCAC-TCA--------GT----C-CA-TCTAAC---T-------------------TCTATTtctaatgtaatta-tt-ta-t--t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9571438 51 +   9816681 TT---------------------TT--GTCTCAC-TCA--------GT----C-CA-TCTAAC---T-------------------TCTATTTCTAATGTAATTA-TT-TA-T--T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               74011 51 -     81375 TT---------------------TT--GT----C-TCA-TT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              5832 51 +     19060 TT---------------------TT--GT----C-TCA-TT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 13969 50 -     22811 GC---------------------T---G-----C-C-CGCT-C-A-GT----C-TA-CCTAAC---C-------------------ACTGCTTCTGATTTCACCC-TC-TTTT--A
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2597368 50 -   4620579 TT---------------------T---GC----C-TCT-CT-C-A-GT----C-CA-TCTAAC---C-------------------ACTGCTTCTAGTGTAAATC-AT-TT-C--C
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     991354 50 +   2598838 TT---------------------T---GC----C-TCT-CT-C-A-GT----C-CA-TTTAAC---C-------------------ACTGCTTCTAGTGTAAATC-TT-TT-T--C
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29666 50 +     38485 TT---------------------T---GC----C-TCT-CT-C-A-GT----C-CA-TTTAAC---C-------------------ACTGCTTCTAGTGTAAATC-TT-TT-T--C
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1708 50 -     13098 TT---------------------T---GC----C-TCT-CT-C-A-GT----C-CA-TTTAAC---C-------------------ACTGCTTCTAGTGTAAATC-TT-TT-T--C
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          27187 50 +     35766 TT---------------------T---GC----C-TCT-CT-C-A-GT----C-CA-TTTAAC---C-------------------ACTGCTTCTAGTGTAAATC-TT-TT-T--C
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           5374 50 -     24134 TT---------------------T---GC----C-TCT-CT-C-A-GT----C-CA-TTTAAC---C-------------------ACTGCTTCTAGTGTAAATC-TT-TT-T--C
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        29199 50 -     67325 TT---------------------T---GC----C-TCT-CA-C-A-GT----C-CA-TTTAAC---C-------------------ACTGCTTCTAGTGTAAATC-TT-TT-T--C
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           5422 50 -      6182 TT---------------------T---GC----C-TCT-CT-C-A-GT----C-CA-TTTAAC---C-------------------ACTGCTTCTAGTGTAAATC-TT-TT-T--C
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            11010 35 -     21651 ----------------------------------------------------------TCCAACCGTG------------------GCTGCTTCTAATGTAATCC-TC-TT-T--C
i Psammomys_obesus.NESX01036370.1                        I 11 C 0
s Pteronotus_parnellii.KE909381.1                            15800 21 -     21811 ------------------------------------------------------------------------------------------TTTCTAATGTAATAC-TC-GT-T--C
i Pteronotus_parnellii.KE909381.1                        I 20 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40868 45 +     42204 -----------------------------------CTCACT-C-A-AT----C-CA-TCCAAC---T-------------------ATTGCTTCCAATGTTATCC-GC-TT-T--C
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 4 C 0
s Pteropus_alecto.KB030862.1                              22977387 49 +  28871421 -t---------------------t---g-----c-ctc-ag-t-c-ag---at-ca-tctagc---c-------------------actgctcctaatgtaatcc-tc-tt-t--c
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                7440 49 -      8028 -T---------------------T---G-----C-CTCAGT-C---AG-A--T-CA-TCTAGC---C-------------------ACTGCTCCTAATGTAATCC-tc-tt-t--c
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20274960 25 -  38429054 --------------------------------------------------------------------------------------ACTGCTTGTAATGTAATCC-TC-TT-T--C
i Puma_concolor.QAVW01001104.1                           I 20 C 0
s Pygathrix_cinerea.k141_1153803                             15818 51 -     91421 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7609938 51 +   7812017 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             15817 51 -     72585 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53571227 35 +  90668790 ----------------------------------------------------------TTCAACTGTG------------------GCTGCTTCTAATGTAATCC-TT-TT-T--C
i Rattus_norvegicus.chr16                                I 11 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        367660  4 -   3329780 -------------------------------------------------------------------------------------------------------------tt-a--a
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             7528 51 -     11128 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTGTAATGTAATTC-TT-TA-T--T
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236877 51 - 195417433 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTGTAATGTAAttc-tt-ta-t--t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672533 51 +   7961872 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTGTAATGTAATTC-TT-TA-T--T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88428 49 -     96226 -T---------------------T---G-----C-CTCAGT-C---AG--G-T-CA-TCTAGC---C-------------------ATTATTCCTAATGTAATCC-TC-TT-T--C
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_8081                                  1940 50 +     42994 TT---------------------C---GT----C-TCA-CT-T-G-GT----C-CA-TCTAAC---T-------------------TCCACTTCAAATGTAGTTCCTT-TT-T---
i Saguinus_bicolor.k141_8081                             C 0 I 1
s Saguinus_imperator.k141_1496743                              634 50 +      2253 TT---------------------C---GT----C-TCA-CT-C-G-GT----C-CA-TCTAAC---T-------------------TCCACTTCTAATGTAGTTCCTT-TG-T---
i Saguinus_imperator.k141_1496743                        C 0 I 3
s Saguinus_inustus.k141_3945547                               1062 50 -      8737 TT---------------------C---GT----C-TCA-CT-C-G-GT----C-CA-TCTAAC---T-------------------TCCACTTCTAATGTAGTTCCTT-TG-T---
i Saguinus_inustus.k141_3945547                          C 0 I 1
s Saguinus_labiatus.k141_4004060                               716 50 +      2343 TT---------------------C---GT----C-TCA-CT-C-G-GT----G-CA-TCTAAC---T-------------------TCCACTTCTAATGTAGTTCCTT-TG-T---
i Saguinus_labiatus.k141_4004060                         C 0 I 3
s Saguinus_midas.LG03                                    209475594 50 + 209938924 TT---------------------C---GT----C-TCA-CT-T-G-GT----C-CA-TCTAAC---T-------------------TCCACTTCAAATGTAGTTCCTT-TT-T---
i Saguinus_midas.LG03                                    C 0 I 1
s Saguinus_mystax.k141_374627                                 9297 50 -      9399 TT---------------------C---GT----C-TCA-CT-C-G-GT----C-CA-TCTAAC---T-------------------TCCACTTCTAATGTAGTTCCTT-TG-T---
i Saguinus_mystax.k141_374627                            C 0 I 3
s Saimiri_boliviensis.NW_024100920.1                     119951664 51 - 121099817 TT---------------------T---GT----C-TCA-CT---AGGT----C-CA-TCTAAC---T-------------------TCCACTTTTAATGTAATtcctt-tt-t--t
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24006 51 +     46362 TT---------------------T---GT----C-TCA-CT---AGGT----C-CA-TCTAAC---T-------------------TCCACTTTTAATGTAATTCCTT-TT-T--T
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               24101 51 +     45824 TT---------------------T---GT----C-TCA-CT---AGGT----C-CA-TCTAAC---T-------------------TCCACTTTTAATGTAATTCCTT-TT-T--T
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             40780 51 -     64574 TT---------------------T---GT----C-TCA-CT---AGGT----C-CA-TCTAAC---T-------------------TCCACTTTTAATGTAATTCCTT-TT-T--T
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               3853 51 -     23631 TT---------------------T---GT----C-TCA-CT---AGGT----C-CA-TCTAAC---T-------------------TCCACTTTTAATGTAATTCCTT-TT-T--T
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 23997 51 -     61129 TT---------------------T---GT----C-TCA-CT---AGGT----C-CA-TCTAAC---T-------------------TCCACTTTTAATGTAATTCCTT-TT-T--T
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5421372 23 -   5703754 ---------------------------GT----C-TCA-CT-G-G-GT----C-CG-TCTAAC---T-------------------T-----------------------------
i Sapajus_apella.ctg103                                  I 2 I 2
s Sapajus_macrocephalus.k141_351809                          56613 23 -     80660 ---------------------------GT----C-TCA-CT-G-G-GT----C-CG-TCTAAC---T-------------------T-----------------------------
i Sapajus_macrocephalus.k141_351809                      I 2 I 2
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153811 49 -    313613 TT---------------------T---A-----C-CTCAC-------TCAATC-CA-T-TAAC---T-------------------GCTGCTTCTAACATAGTCC-TC-TT-T--A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                          709 51 -     12572 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27559 51 +     39453 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            8077 51 +     27826 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             7599 51 -     19483 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                       900 51 -     12762 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                            761 51 +     13763 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                      914 35 -     30804 ----------------------------------------------------------TCCAACTATG------------------GCTGATTCTAATGTAATCC-TC-TT-T--T
i Sigmodon_hispidus.SigHis_scaffold_42075                I 17 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               4373 46 +   1910179 TT---------------------T---G-----C-TTCAC-------T----C-GA-TCTAAC---C-------------------AGTGCTTCTCATGTAATCC-TC-TT-G--C
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13651636 31 -  18376816 ----------------------------------------------------------TTGTC---A-------------------GCAAGTACTAAAGTAGCCC-TC-TC-T--C
i Sorex_araneus.JH798187.1                               I 11 C 0
s Spermophilus_dauricus.KZ294078.1                         1954558 50 -   3870691 TT---------------------G---C-----C-TCA-CT-C-A-GT----C-TC-CCTAACC-AC-T-----------------GCTGCTGTTAATGTAATCC--C-T--T--c
i Spermophilus_dauricus.KZ294078.1                       I 1 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             31354 44 +     97271 -----------------------------------CTCAGT-C-A-AT----C-CA-TCCAAC---T-------------------ATTGCTTCCAATGTTA-CC-AT-TT-T--C
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 4 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              18961 45 -    196729 -----------------------------------CTCA-TGC-A-AC----C-CA-TCCAGA---C-------------------ACCACTTGTACCCTAATCC-TC-TT-T--C
i Suricata_suricatta.SurSur_flattened_line_6629          I 4 C 0
s Sus_scrofa.CM000828.4                                    6811454 24 +  69701581 ---------------------------------------------------------------------------------------CTGTTTCTAATGTCAACC-TC-CT-T--T
i Sus_scrofa.CM000828.4                                  I 12 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                11454 20 +     41958 ------------------------------------------------------------------------------------------T-TCTAGTGTCATTC-TC-TT-T--C
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 20 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73251 47 +    116680 GT---------------------T---G-----C-CTCA-T-CCA-GT----T-TA-TGTAAC---C-------------------CCTGCTTCTAATTTAACCC-TT-T------
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      119419 35 -    156842 ------------------------------------------------------ctgtctaac---t-------------------gctgcttctaatgtaatcc-tc-tt-t--c
i Tapirus_indicus.TapInd_scaffold_9301                   I 14 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387875 35 +    539355 ------------------------------------------------------ccgtctaac---c-------------------gctgcttctaatgtaatcc-tc-tt-t--c
i Tapirus_terrestris.TapTer_scaffold_755                 I 14 C 0
s Theropithecus_gelada.CM009954.1                        186429246 51 + 186847797 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAAttc-tt-ta-t--t
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106007 52 +    114563 AT---------------------G---C-----C-TCA-CT-C-A-G-----TCCT-GCTAAC-TCC-T-----------------GCTGCTTCTAATGCAGTCC-TC-AT-T--C
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   7007 47 +      8208 TT---------------------C---A-----T-CTCAGC-C-G-GT----C-CA-TCTAAC---C-------------------AGTGCTTCTATTTTAATCC-TC-T------
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81847 21 +    610378 ------------------------------------------------------------------------------------------CTTCTAATGCAATAC-TC-AT-C--A
i Tonatia_saurophila.TonSau_scaffold_294                 I 19 C 0
s Trachypithecus_auratus.k141_722599                         11650 51 -     20410 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                       764 51 -     12674 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       11751 51 +     19930 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       8162 51 -     19997 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48301 51 -     60166 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        15773 51 -     27529 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     15717 51 -     18194 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9429 51 -     21137 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    8132 51 -     10723 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7304 51 +      9834 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        25617 51 +     32220 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5939719 51 +   6242583 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        8970 51 +     20839 TT---------------------TT--GT----C-TCA-CT-C-A-GT----C-CA-TCTAAC---T-------------------TCCATTTCTAATGTAATTC-TT-TA-T--T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4293870 50 +  10818551 TT---------------------T---G-----C-CCCACT-C-A-GT----C-CA-TCTAAC---C-------------------ACTCCTTCTAATTTAACCC-TC-TT-T--A
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2156425 50 +   4065304 TC---------------------T---G-----TGTCA-CG-T-T-GT----C-CA-TCTATC---C-------------------CCCGCCTGTAATACCACTC-GC-TG-T--C
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9868 50 -     10553 TC---------------------T---A-----CGTCA-CA-T-T-GT----C-CA-TCTAAC---C-------------------CCTGCCTGTAATGTCATTC-AC-TT-T--C
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   53925 45 -     77625 ---------------------------------C-ATCAC-------T-AATC-CT-TCTACC---A-------------------CCAGCTTCTAACATAGTCC-TT-TT-T--G
i Uropsilus_gracilis.UroGra_scaffold_12083               I 3 C 0
s Ursus_maritimus.KK499267.1                               4851070 45 -   5085361 -----------------------------------CTCACT-C-A-AT----C-CA-TCCAAC---T-------------------ACTTCTTGCAATGTCATCC-GC-TT-T--C
i Ursus_maritimus.KK499267.1                             I 4 C 0
s Varecia_rubra.k141_590885                                  12033 50 +     50397 TT---------------------T---GC----C-TCT-CT-C-A-GT----C-CA-TCTAAC---C-------------------ACTGCTTCCAGTGTAAATA-AT-TT-C--C
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             12092 50 +     24756 TT---------------------T---GC----C-TCT-CT-C-A-GT----C-CA-TCTAAC---C-------------------ACTGCTTCCAGTGTAAATA-AT-TT-C--C
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5372417 24 -   5488506 ---------------------------------------------------------------------------------------CTGTTTCTAATGTAATTC-TC-TT-C--T
i Vicugna_pacos.KN270157.1                               I 6 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 11421 45 -     43706 -----------------------------------CCCACT-C-A-GT----C-CA-CCCAAC---C-------------------ACCGTTTGAAATGTAATCC-AC-TT-T--C
i Vulpes_lagopus.VulLag_flattened_line_30954             I 4 C 0
s Xerus_inauris.XerIna_scaffold_2302                          1679 51 +    224448 TT---------------------G---C-----C-TCA-CT-C-A-GT----C-TC-CCTAACC-AC-T-----------------ATTGCTTCTAATGTAATCC-TT-T--T--C
i Xerus_inauris.XerIna_scaffold_2302                     I 1 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      15537 34 +     63895 -----------------------------------------------------------CCAACTGT----A--------------GCTGCTTCTAATGTAATCT-TC-TT-T--C
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 13 C 0
e Chiropotes_albinasus.k141_2206961                           1651 303 -     15524 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tarsius_wallacei.k141_254427                                1877  3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080  3 +     70052 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50964  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18978  0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cephalopachus_bancanus.k141_1423433                         6085  3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Carlito_syrichta.NW_007259797.1                           156587  3 -    496798 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       7495 14 +     62944 A--C------A--AA-A-A-TAA-TTTG
s Acinonyx_jubatus.LLWD01001279.1                           827978 14 -   1699592 C--C------A--AA-G-A-GCA-TGTG
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     71452 15 +     87051 G--C------A--AA-ACA-TGA-TTTG
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511255 14 -  29979442 a--c------a--aa-a-a-taa-tgtg
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             79988 14 -    347723 A--C------A--AA-A-A-TAA-TGTG
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     75158 14 -     89534 A--C------A--AA-A-A-TAA-TTTG
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   15424 14 -     52922 A--C------A--AA-A-A-TAA-TTTG
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15344 14 -     28001 A--C------A--AA-A-A-TAA-TTTG
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          5842 14 -     18505 A--C------A--AA-A-A-TAA-TTTG
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           6694 14 -     12518 A--C------A--AA-A-A-TAA-TTTG
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              8270 14 +     51355 A--C------A--AA-A-A-TAA-TTTG
i Alouatta_belzebul.k141_3560514                         I 3 C 0
s Alouatta_caraya.k141_1701091                                1379 14 -     36483 A--C------A--AA-A-A-TAA-TTTG
i Alouatta_caraya.k141_1701091                           I 2 C 0
s Alouatta_discolor.k141_566626                              11829 16 +     28687 AATT------T--AA-T-G-TAA-TTTG
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                  344 14 +     27940 A--C------A--AA-A-A-TAA-TTTG
i Alouatta_juara.k141_1302312                            I 2 C 0
s Alouatta_macconnelli.k141_918386                            1388 14 -      9457 A--C------A--AA-A-A-TAA-TTTG
i Alouatta_macconnelli.k141_918386                       I 2 C 0
s Alouatta_nigerrima.k141_1929159                              344 14 +     30492 A--C------A--AA-A-A-TAA-TTTG
i Alouatta_nigerrima.k141_1929159                        I 2 C 0
s Alouatta_palliata.k141_2135620                              4339 14 +     47717 A--C------A--AA-A-A-TAA-TTTG
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              1071 14 +      5663 A--C------A--AA-A-A-TAA-TTTG
i Alouatta_puruensis.k141_362188                         I 2 C 0
s Alouatta_seniculus.k141_117119                             15523 14 +     50774 A--C------A--AA-A-A-TAA-TTTG
i Alouatta_seniculus.k141_117119                         I 2 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      186018 14 +    412891 G--T------G--CA-A-A-TAA-TTTG
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  16516 14 -     33861 A--T------A--AA-A-A-TAA-TTTG
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            16513 14 -     34016 A--T------A--AA-A-A-TAA-TTTG
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4298940 14 -   5030052 a--t------a--aa-a-a-taa-tttg
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             16549 14 -     34685 A--T------A--AA-A-A-TAA-TTTG
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               29674 14 -     47192 A--T------A--AA-A-A-TAA-TTTG
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13276 13 +     20879 A--C------A--A--G-A-TAA-TTTG
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       12112 14 +     14667 A--C------A--AA-A-A-TAA-TGTG
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5408 14 +     43469 G--T------G--CA-A-A-TAA-TTTG
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  54360 14 -     92717 A--C------A--AA-A-A-CAA-TTCG
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              54991 14 +     85213 A--C------A--AA-A-A-CAA-TTCG
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             6398 14 -     10423 A--A------A--AA-A-A-TAA-TTTG
i Callibella_humilis.k141_1278103                        I 1 C 0
s Callithrix_geoffroyi.k119_69176                              237 14 +      5377 A--A------A--AA-A-A-TAA-TTTG
i Callithrix_geoffroyi.k119_69176                        I 1 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592098 14 - 189096842 A--A------A--AA-A-A-TAA-TTTG
i Callithrix_jacchus.pat_scaffold_3                      I 1 C 0
s Callithrix_kuhlii.k119_1168854                               912 14 -     12329 A--A------A--AA-A-A-TAA-TTTG
i Callithrix_kuhlii.k119_1168854                         I 1 C 0
s Camelus_bactrianus.KN276810.1                           10002908 14 -  17673402 G--C------A--GA-A-A-TAA-TTTC
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2335384 14 -   7040546 G--C------A--GA-A-A-TAA-TTTC
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  403681 14 -   1652518 G--C------A--GA-A-A-TAA-TTTC
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17799844 14 -  60362399 A--C------A--AA-G-A-TAA-CGTG
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                      592 14 -     43241 A--C------A--AA-G-A-TAA-CGTG
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9035287 14 -   9314153 A--C------A--AA-G-A-TAA-CTTG
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17959763 14 -  59632846 A--C------A--AA-G-A-TAA-CGTG
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18501060 14 +  63665305 A--C------A--AA-G-A-TAA-CGTG
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1684 15 -     12242 A--C------A--AAAA-A-TAA-TGCT
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5775 14 -     11696 G--T------G--CA-A-A-TAA-TTTG
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137771 14 +    179628 A--C------A--AA-A-A-TAA-TTTG
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     93731 14 +    217609 g--c------a--aa-a-a-taa-ttta
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                         10838 14 -     11392 A--A------A--AA-A-A-TAA-TTTG
i Cebuella_niveiventris.k141_1251222                     I 1 C 0
s Cebuella_pygmaea.k141_1309012                               7022 14 -      7577 A--A------A--AA-A-A-TAA-TTTG
i Cebuella_pygmaea.k141_1309012                          I 1 C 0
s Cebus_albifrons.Contig27                                25653443 14 +  26074798 A--C------A--AA-A-A-TAA-TGTG
i Cebus_albifrons.Contig27                               I 2 C 0
s Cebus_olivaceus.k141_1764483                                1381 14 +     28840 A--C------A--AA-A-A-TAA-TGTG
i Cebus_olivaceus.k141_1764483                           I 2 C 0
s Cebus_unicolor.k141_1837183                                 1106 14 +     14051 A--C------A--AA-A-A-TAA-TGTG
i Cebus_unicolor.k141_1837183                            I 2 C 0
s Ceratotherium_simum.JH767749.1                          12232125 14 +  27778364 a--c------a--ga-a-a-taa-tctg
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3152 14 -     25243 a--c------a--ga-a-a-taa-tctg
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4476359 14 +   4669795 a--c------a--aa-a-a-taa-tttg
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                         861 14 +     17872 A--C------A--AA-A-A-TAA-TTTG
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           1518 14 -     14043 A--C------A--AA-A-A-TAA-TTTG
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9551 14 +     27781 A--C------A--AA-A-A-TAA-TTTG
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         9719 14 -     20310 A--C------A--AA-A-A-TAA-TTTG
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          12699 14 +     29689 A--C------A--AA-A-A-TAA-TTTG
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7445 14 -     20078 A--C------G--AA-A-A-TAA-TTTG
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          15367 14 -     27936 A--C------A--AA-A-G-TAA-TTTG
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            4233 14 -     17152 A--C------A--AA-A-G-TAA-TTTG
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38817778 14 +  39242232 A--C------A--AA-A-A-TAA-TTTG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223467 14 -  21565898 A--C------A--GA-A-A-TAA-TTTG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40586 14 -     53127 A--C------A--AA-A-A-TAA-TTTG
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                         837 14 +     13442 A--C------A--AA-A-A-TAA-TTTG
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15386 14 -     27947 A--C------A--AA-A-A-TAA-TTTG
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         15362 14 +     17596 A--C------A--AA-A-A-TAA-TTTG
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          1405 14 +     14005 A--C------G--AA-A-A-TAA-TTTG
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1164 11 -      8501 -------------AA-A-A-TAA-TCTG
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             21738 14 -     52598 A--C------A--AA-A-A-TAA-TTCG
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           17105 14 +     57038 A--C------A--AA-A-A-TAA-TTCG
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1253559 14 +   2543920 A--C------A--AA-A-A-TAA-TTCT
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18429346 14 -  18827391 A--C------A--AA-A-A-TAA-TTTG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15782 14 -     50209 A--C------A--AA-A-A-TAA-TTTG
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422783 14 + 135778131 a--c------a--aa-a-a-taa-tttg
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 18985 11 +     19366 -------------GT-A-A-TAA-TTTC
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            174060 11 +    839153 -------------GT-A-A-TAA-TTTC
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1911259 14 +   2368649 a--c------a--aa-a-a-taa-tttg
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949511 14 + 200372422 A--C------A--AA-A-A-TAA-TTTG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37793 14 +     84244 A--C------A--AA-A-A-TAA-TTTG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17548717 11 -  53390261 a--c------a--a--a-a-taa-tt--
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_58438          15083 14 -     20389 A--C------A--AA-A-A-TAA-CTTC
i Craseonycteris_thonglongyai.CraTho_scaffold_58438      C 0 n 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 50691 15 +     63868 a--c------a--aa-ata-taa-tttg
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11668213 15 + 224834208 A--C------A--AA-TCA-TAA-TTTG
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               3635 13 -     19598 A--T------A--AA-A-A-TAT-TCT-
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29167 14 -     87169 C--C------A--AA-A-A-GCA-TGTG
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837755 14 +   1526836 A--C------A--AA-A-A-CAA-TTTT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  36557 11 +     51376 A--C------A--AA-A-A-TA----TT
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            64182 11 +   2246927 -------------AA-A-A-TAA-TTTG
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537941 14 -  12879189 a--c------a--aa-a-a-taa-tttg
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630790 14 +  20541912 G--T------G--CA-A-G-TAA-TTTG
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673974 14 +   1390856 a--c------a--ga-a-a-tca-tctg
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6725 14 +    198055 a--c------a--ga-a-a-taa-tctg
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37038 13 +     67921 A--C------A--A--A-A-CAG-TTCT
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Echinops_telfairi.JH980293.1                            48781240  2 + 111700974 --------------------------tt
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.KE759718.1                                  11196 14 +     11740 a--c------a--aa-a-a-taa-ttag
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1098399 13 +  10337057 A--C------A--GC-G-G-T-T-TTTG
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          21164 15 -    110024 A--C------A--AA-ACA-TAA-TTTG
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                            1068 15 +      8657 A--C------A--AA-ACA-TAA-TTTG
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16329980 13 -  41312741 A--C------A--AA-T-G-T-A-TGTG
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2146394 11 -  14770903 A--C------A--CA-A-A-TAG-T---
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1284234 14 +   4378816 a--c------a--ga-a-a-caa-tctg
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18532054 14 -  39960074 a--c------a--ga-a-a-caa-tctg
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               34083 14 +    498745 a--c------a--ga-a-a-caa-tctg
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3328922 14 -   7059049 A--C------A--AA-A-A-T-AATGGA
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21205951 14 -  21539334 A--C------A--AA-A-A-TAA-TTTG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_576796                              40785 14 -     44621 A--A------A--AA-A-A-TAA-TTTG
i Eulemur_albifrons.k141_576796                          C 0 C 0
s Eulemur_collaris.k141_377015                                7166 14 -     16928 A--A------A--AA-A-A-TAA-TTTG
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              16198 14 -     25546 A--A------A--AA-A-A-TAA-TTTG
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            13394 14 +     26330 A--A------A--AA-A-A-TAA-TTTG
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14629 14 +     23973 A--A------A--AA-A-A-TAA-TTTG
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                13391 14 +     75513 a--a------a--aa-a-a-taa-tttg
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 11321 14 +     97555 a--a------a--aa-a-a-taa-tttg
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              813 14 +     13026 a--a------a--aa-a-a-taa-tttg
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4865 14 -     17153 A--A------A--AA-A-A-TAA-TTTG
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              14438 14 +    111500 a--a------a--aa-a-a-taa-tttg
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237620 14 + 206538554 C--C------A--AA-G-A-GCA-TGTG
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20196463 14 + 205367284 C--C------A--AA-G-A-GCA-TGTG
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 10216 14 -     36744 C--C------A--AA-G-A-GCA-TGTG
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             851087 14 +   3816255 A--C------A--AA-A-A-TCA-TGTT
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg2040                                     427261 14 -    453645 A--C------A--AA-A-A-TAA-TGTG
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             4951 14 +     11339 A--C------A--AA-A-A-TAA-TGTG
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            2249 14 +     41679 A--C------G--AA-A-A-TAA-TGTG
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1867 14 -      9135 A--C------A--CA-A-A-TAA-TTTG
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            32042 14 +     49224 A--C------A--AA-A-C-TAA-TTTG
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              16750 14 -     32273 A--C------A--AA-A-A-TAA-TTTG
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186338886 14 + 186649187 a--c------a--aa-a-a-taa-tttg
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33281 14 +     78134 A--C------A--AA-A-C-TAA-TTTG
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           7493 14 -     19426 A--A------A--AA-A-C-TAA-TTTG
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12646 14 -     15286 A--A------A--AA-A-C-TAA-TTTG
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             14285 14 +     18253 A--A------A--AA-A-C-TAA-TTTG
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         14386 14 -     41752 A--A------A--AA-A-C-TAA-TTTG
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         14223 14 -     16460 A--A------A--AA-A-C-TAA-TTTG
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243004 14 +    327341 C--C------A--GA-A-A-GCA-TGTG
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20662845 14 +  22651954 A--C------A--AA-A-A-TAA-TGTT
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1564 14 +      7595 A--C------A--AA-A-A-TAA-TTTG
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       111177 14 +   1711038 t--t------g--at-a-a-taA-TTTG
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               42608 14 +     43066 T--A------A--AT-A-A-TAA-TTTG
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    435551 14 +    630532 A--C------A--AA-A-A-TAA-TTTG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45707 14 +     55795 C--C------A--AA-A-A-GAA-TGTG
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83742 14 +    135385 A--C------A--AA-A-A-TAA-TGTT
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7521555 14 -   7955117 a--c------a--aa-a-a-taa-tttg
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   23183 14 +     31101 a--c------a--aa-a-a-taa-ttca
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8277570 16 -   9596543 a--c------aaaaa-a-a-taa-ttgg
i Jaculus_jaculus.JH725527.1                             I 2 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    17044 11 -     42476 A--C------A--CA-A-A-TAA-T---
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 76
s Lemur_catta.scaffold_24                                 15524738 14 -  30322482 a--a------a--aa-a-a-taa-tttg
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        8676 14 +     64341 A--A------A--AA-A-A-TAA-TTTG
i Leontocebus_fuscicollis.k141_1820339                   I 1 C 0
s Leontocebus_illigeri.k141_1304848                           1016 14 -     35062 A--A------A--AA-A-A-TAA-TTTG
i Leontocebus_illigeri.k141_1304848                      I 1 C 0
s Leontocebus_nigricollis.k141_4610752                        8703 14 +     35603 A--A------A--AA-A-A-TAA-TTTG
i Leontocebus_nigricollis.k141_4610752                   I 1 C 0
s Leontopithecus_chrysomelas.k141_1519602                    30316 14 +     38576 A--A------A--AA-A-A-TAA-CTTG
i Leontopithecus_chrysomelas.k141_1519602                I 1 C 0
s Leontopithecus_rosalia.k141_464620                         27020 14 +     66356 T--A------A--AA-A-A-TAA-TTTG
i Leontopithecus_rosalia.k141_464620                     I 1 C 0
s Lepilemur_ankaranensis.k141_596936                         11616 14 -     23766 A--C------A--AA-A-A-TAA-TTTG
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29677 14 +     45836 A--C------A--AA-A-A-TAA-TTTG
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          2215 14 +     25010 A--C------A--AA-A-A-TAA-TTTG
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27609 14 +     54090 A--C------A--AA-A-A-TAA-TTTG
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3043726 14 +   3914936 A--C------A--AA-A-A-TAA-TGTG
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     7154 14 -     14121 A--C------A--AA-A-A-TAA-TTTG
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437902 14 +   1826925 A--C------A--AA-A-A-TAA-TTTG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            6509 14 +     11245 A--C------A--AA-A-A-TAA-TGTG
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1005330 14 +   6120653 A--C------A--AA-A-A-TAA-TGTG
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4218021 14 -  43346337 a--c------a--aa-a-a-taa-tttg
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17956003 14 -  59628241 A--C------A--AA-G-A-TAA-CGTG
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               7717 14 +     40492 A--C------A--AA-A-A-TAA-TTTG
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59676976 14 +  60120075 A--C------A--AA-A-A-TAA-TTTG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13492 14 -     26193 A--C------A--AA-A-A-TAA-TTTG
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            81276 14 -    114318 A--C------A--AA-A-A-TAA-TTTG
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  6963 14 -     23192 A--C------A--AA-A-A-TAA-TTTG
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16436 14 -     29190 A--C------A--AA-A-A-TAA-TTTG
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  25001 14 +     37952 A--C------A--AA-A-A-TAA-TTTG
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186840090 14 + 187317192 a--c------a--aa-a-a-taa-tttg
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458653 14 -  25927173 a--c------a--aa-a-a-taa-tttg
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  80849 14 +     89720 A--C------A--AA-A-A-TAA-TTTG
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 7850 14 +     20474 A--C------A--AA-A-A-TAA-TTTG
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   7650 14 -     14993 A--C------A--AA-A-A-TAA-TTTG
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  330516 14 -    668171 A--C------A--AA-A-A-TAA-TTTG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 5963 14 -     24072 A--C------A--AA-A-A-TAA-TTTG
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26588 14 -     45290 A--C------A--AA-A-A-TAA-TTTG
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91290 14 +     94391 a--c------a--aa-a-a-taa-ttag
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23938179 14 -  24302211 A--C------A--AA-A-A-TAA-TTTG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352301 14 +    752769 A--C------A--AA-A-A-TAA-TTTG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33103752 14 -  40650429 a--c------a--aa-a-a-taa-tttg
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        13994 20 -    207569 A--TTTTTCAA--AT-A-A-TAA-TTTA
i Megaderma_lyra.MegLyr_scaffold_4542                    I 2884 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10719 14 +     13704 A--C------A--AA-A-A-TAA-TGTG
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 33399 15 +    140813 A--C------A--AA-ACA-TAA-TTTG
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12182869 15 -  29670104 A--C------A--AA-ACA-TAT-TTTG
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                6834 14 -      7380 A--A------A--AA-A-A-TAA-TTTG
i Mico_argentatus.k141_1239457                           I 1 C 0
s Mico_schneideri.k141_1950671                                      6807 14 -      7356 A--A------A--AA-A-A-TAA-TTTG
i Mico_schneideri.k141_1950671                                 I 1 C 0
s Microcebus_murinus.CM007674.1                           18292164 14 -  93316391 a--c------a--aa-a-a-taa-tccG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    22967  2 -    145209 --------------------------TT
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 167
s Micronycteris_hirsuta.MicHir_scaffold_52381                16314 14 -     19307 G--T------A--CA-A-A-TAA-TTTG
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11261117 15 -  27267610 A--C------A--AA-ACA-TAA-TTTG
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1851268 14 +   8254450 A--C------A--CA-A-A-TCA-TTTG
i Miniopterus_natalensis.LDJU01000034.1                  I 2 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34948 14 +     64694 A--C------G--CA-A-A-TCA-TTTG
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 2 C 0
s Miopithecus_ogouensis.k141_534055                           9885 14 -     28506 A--C------A--AA-A-A-TAA-TTTG
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6594 14 -      8324 A--C------A--AA-A-A-TAA-TGTG
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      9708 14 -     37649 G--C------A--AA-A-A-TAA-TTCA
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142312 14 -    366855 G--T------G--CA-A-G-TAA-TTTG
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   36103 14 +     37127 C--C------A--AA-A-A-GCA-TGTG
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           7498 14 +     14753 A--C------A--CA-A-A-TAA-TTTG
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84362014 15 - 120012414 A--C------A--AA-ACG-TAA-TTTG
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87651007 15 - 129401213 A--C------A--AA-ACA-TAA-TTTG
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31355664 15 -  89631738 A--G------G--AA-ACA-TAA-TTTG
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90753070 15 - 130317789 A--C------A--AA-ACA-TAA-TTTG
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               302131 14 -  14710649 A--C------A--AA-A-A-TAA-TGTG
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71872 15 -     80779 A--C------A--AAAA-A-TAA-TGTT
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                281133 14 -  10118263 A--C------A--CA-A-A-CAA-TTTG
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1588389 14 -   6019432 A--C------A--CA-A-A-CAA-TGTA
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3904485 14 -   4330536 A--C------A--CA-A-A-CAA-TCTG
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                         636 14 +      1835 A--C------A--CA-A-A-CAA-TGTA
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 I 77
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189939 11 +    196477 -------------AT-A-A-TAA-ATTG
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2034717 15 -   3037898 A--C------A--AA-ATA-TAT-CCTG
i Nannospalax_galili.KL204047.1                          I 4 C 0
s Nasalis_larvatus.k141_413338                               15887 14 +     21681 A--C------A--AA-A-A-TAA-TTTG
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308180 14 +  31847680 A--C------A--AA-A-A-TAA-TGTG
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    758547 14 +    783361 G--T------G--CA-A-A-TAA-TTTG
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150066 14 -   9404916 A--C------A--AA-G-A-TAA-CGTG
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102586874 14 - 196305487 A--C------A--AA-A-A-TAA-TGTG
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              798 14 +      2075 A--C------A--AA-A-A-TAA-TGTG
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105762229 14 + 199412804 A--C------A--AA-A-A-TAA-TGTG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1364531 14 +   3988456 A--C------A--AA-A-C-CAA-TTTG
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  747613 11 +  11899542 A--T------G--AA-A-A-TA----AT
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                              507322 14 -   2017862 a--c------a--aa-a-a-taa-caTG
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   25795 15 +     28053 A--C------A--AA-ACA-TAA-TTTG
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    80797 15 +    102263 A--C------A--AA-ACA-CAA-TTTG
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387              10781 14 -     18566 A--C------A--AG-A-A-TAA-TTTG
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67148014 14 + 174332312 a--c------a--aa-a-a-taa-tttg
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       463015 14 -    559221 A--C------A--AA-G-A-TAA-CGTG
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4781 14 +      8798 A--C------A--AA-A-A-TAA-TGTG
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             696944 14 -   1103335 a--c------a--aa-a-a-taa-tgtG
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    44838 14 +     80009 a--c------a--aa-a-a-taa-tttg
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189143737 14 + 189151597 a--c------a--aa-a-a-taa-tttg
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  151826 14 +    230217 C--C------A--AA-G-A-GCA-TGTG
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                265035 14 +  18783137 C--C------A--AA-G-A-GCA-TGTG
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4721914 14 -   8748460 C--C------A--AA-G-A-GCA-TGTG
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183443979 14 + 183742232 a--c------a--aa-a-a-taa-tttg
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7625 14 +     20448 A--C------A--AA-A-A-TAA-TTTG
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20564437 14 +  20919399 A--C------A--AA-A-A-TAA-TTTG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6369 14 +     41871 A--C------A--AA-A-A-TAA-TTTG
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     9662 14 +     27711 A--C------A--AA-A-A-TAA-TTTG
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                   659 14 -     11374 A--C------A--AA-A-A-TAA-TTTG
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13327 14 -     78924 C--G------C--AA-A-A-TCA-TGTG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10768 14 +     13100 A--C------A--AA-A-A-TAA-TGTG
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             9162 14 +     25941 A--C------A--AA-A-A-TAA-TGTG
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18195420 15 -  18517816 A--C------A--AA-ACA-CAA-TTTG
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28754 14 -     29689 T--C------C--AA-A-A-TAA-TGTT
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Piliocolobus_badius.k141_1234363                           44378 14 +     62158 A--C------A--AA-A-A-TAA-TGTG
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        39125 14 +     89929 A--C------A--AA-A-A-TAA-TGTG
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40541 14 +     51399 A--C------A--AA-A-A-TAA-TGTG
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296779 14 -  14605196 A--C------A--AA-A-A-TAA-TGTG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2435 11 +     22620 A--C------A--CA-T-A-TAG-T---
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189131882 14 + 189387572 a--c------a--aa-a-a-taa-tttg
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9571489 14 +   9816681 A--C------A--AA-A-A-TAA-TTTG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               74062 14 -     81375 A--C------A--AA-A-A-TAA-TTTG
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              5883 14 +     19060 A--C------A--AA-A-A-TAA-TTTG
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 14019 14 -     22811 A--C------A--AA-A-A-TAA-TTTG
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2597418 14 -   4620579 A--A------A--AA-A-C-TAA-TTTG
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     991404 14 +   2598838 A--C------A--AA-A-A-CAA-TTCG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29716 14 +     38485 A--C------A--AA-A-A-CAA-TTCG
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1758 14 -     13098 A--C------A--AA-A-A-CAA-TTCG
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          27237 14 +     35766 A--C------A--AA-A-A-CAA-TTTG
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           5424 14 -     24134 A--C------A--AA-A-A-CAA-TTCG
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        29249 14 -     67325 A--C------A--AA-A-A-CAA-TTCG
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           5472 14 -      6182 A--C------A--AA-A-A-CAA-TTCG
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            11045 15 -     21651 A--C------A--AA-ACA-TAA-TTTG
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            15821 14 -     21811 G--T------G--CA-A-A-TAC-TTGG
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40913 14 +     42204 A--C------A--AA-A-A-TAA-TGTG
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22977436 14 +  28871421 a--c------a--aa-a-a-taa-ttag
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                7489 14 -      8028 a--c------a--aa-a-a-taa-ttag
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20274985 14 -  38429054 C--C------A--AA-G-A-GCA-TGTG
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15869 14 -     91421 A--C------A--AA-A-A-TAA-TTTG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7609989 14 +   7812017 A--C------A--AA-A-A-TAA-TTTG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             15868 14 -     72585 A--C------A--AA-A-A-TAA-TTTG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53571262 15 +  90668790 A--C------A--AA-ACA-TAA-TTTG
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        367664 14 -   3329780 a--t------a--at-a-a-taa-tttg
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             7579 14 -     11128 A--C------A--AA-A-A-TAA-TTTG
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236928 14 - 195417433 a--c------a--aa-a-a-taa-tttg
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672584 14 +   7961872 A--C------A--AA-A-A-TAA-TTTG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88477 14 -     96226 A--C------A--AA-A-A-TAA-TTAC
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_8081                                  1991 15 +     42994 A--A------A--AA-A-AATAA-TTTG
i Saguinus_bicolor.k141_8081                             I 1 C 0
s Saguinus_imperator.k141_1496743                              687 12 +      2253 -------------AA-AAA-TAA-TTTG
i Saguinus_imperator.k141_1496743                        I 3 C 0
s Saguinus_inustus.k141_3945547                               1113 15 -      8737 A--A------A--AA-AAA-TAA-TTTG
i Saguinus_inustus.k141_3945547                          I 1 C 0
s Saguinus_labiatus.k141_4004060                               769 12 +      2343 -------------AA-AAA-TAA-TTTG
i Saguinus_labiatus.k141_4004060                         I 3 C 0
s Saguinus_midas.LG03                                    209475645 15 + 209938924 A--A------A--AA-A-AATAA-TTTG
i Saguinus_midas.LG03                                    I 1 C 0
s Saguinus_mystax.k141_374627                                 9350 12 -      9399 -------------AA-AAA-TAA-TTTG
i Saguinus_mystax.k141_374627                            I 3 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951715 14 - 121099817 a--c------a--aa-a-a-taa-tttg
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24057 14 +     46362 A--C------A--AA-A-A-TAA-TTTG
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               24152 14 +     45824 A--C------A--AA-A-A-TAA-TTTG
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             40831 14 -     64574 A--C------A--AA-A-A-TAA-TTTG
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               3904 14 -     23631 A--C------A--AA-A-A-TAA-TTTG
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 24048 14 -     61129 A--C------A--AA-A-A-TAA-TTTG
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5421397 14 -   5703754 A--C------A--AA-A-A-TAA-TGTG
i Sapajus_apella.ctg103                                  I 2 C 0
s Sapajus_macrocephalus.k141_351809                          56638 14 -     80660 A--C------A--AA-A-A-TAA-TGTG
i Sapajus_macrocephalus.k141_351809                      I 2 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153860 12 -    313613 G--C------A--AA-A-A-TAA-TT--
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                          760 14 -     12572 A--C------A--AA-A-A-TAA-TTTG
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27610 14 +     39453 A--C------A--AA-A-A-TAA-TTTG
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            8128 14 +     27826 A--C------A--AA-A-A-TAA-TTTG
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             7650 14 -     19483 A--C------A--AA-A-A-TAA-TTTG
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                       951 14 -     12762 A--C------A--AA-A-A-TAA-TTTG
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                            812 14 +     13763 A--C------A--AA-A-A-TAA-TTTG
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                      949 15 -     30804 A--C------A--AA-ATA-TAA-TTTG
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               4419 14 +   1910179 A--A------A--AA-A-A-TCA-TTTG
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13651667 14 -  18376816 A--C------A--AA-A-A-TGA-TCTC
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1954608 14 -   3870691 a--c------a--aa-a-a-taa-tttg
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             31398 14 +     97271 A--C------A--AA-A-A-TAA-CATG
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              19006 14 -    196729 C--C------A--AC-A-A-GCA-TGTG
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6811478 14 +  69701581 G--C------A--AA-A-A-TAA-TTTG
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                11474 14 +     41958 A--C------A--CA-A-A-CAA-TGGG
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73298 11 +    116680 -------------AT-A-A-TAA-ATTG
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      119454 14 -    156842 a--c------a--ga-a-a-taa-tctg
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    387910 14 +    539355 a--c------a--ga-a-a-taa-tttg
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Theropithecus_gelada.CM009954.1                        186429297 14 + 186847797 a--c------a--aa-a-a-taa-tttg
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106059 14 +    114563 T--C------C--AA-A-C-TAA-TGTT
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   7054 11 +      8208 -------------AA-A-A-TAA-TCTG
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81868 14 +    610378 G--T------G--CA-A-A-TAA-TTTG
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         11701 14 -     20410 A--C------A--AA-A-A-TAA-TTTG
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                       815 14 -     12674 A--C------A--AA-A-A-TAA-TTTG
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       11802 14 +     19930 A--C------A--AA-A-A-TAA-TTTG
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       8213 14 -     19997 A--C------A--AA-A-A-TAA-TTTG
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48352 14 -     60166 A--C------A--AA-A-A-TAA-TTTG
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        15824 14 -     27529 A--C------A--AA-A-A-TAA-TTTG
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     15768 14 -     18194 A--C------A--AA-A-A-TAA-TTTG
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9480 14 -     21137 A--C------A--AA-A-A-TAA-TTTG
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    8183 14 -     10723 A--C------A--AA-A-A-TAA-TTTG
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7355 14 +      9834 A--C------A--AA-A-A-TAA-TTTG
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        25668 14 +     32220 A--C------A--AA-A-A-TAA-TTTG
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5939770 14 +   6242583 A--C------A--AA-A-A-TAA-TTTG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        9021 14 +     20839 A--C------A--AA-A-A-TAA-TTTG
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4293920 14 +  10818551 A--C------C--AA-A-A-TCA-TTTG
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2156475 14 +   4065304 A--C------A--AA-A-A-TAA-CATG
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                     9918 14 -     10553 A--C------A--AA-A-A-TAA-CGTG
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   53970 13 -     77625 A--C------T--AA-A-A-T-A-TGTG
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4851115 14 -   5085361 A--C------A--AA-A-A-TAA-TGTG
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  12083 14 +     50397 A--C------A--AA-T-A-TAA-TTTG
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             12142 14 +     24756 A--C------A--AA-T-A-TAA-TTTG
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5372441 14 -   5488506 G--C------A--GA-A-A-TAA-TTTC
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 11466 14 -     43706 A--C------A--AA-G-A-TAA-CGTG
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          1730 14 +    224448 A--C------A--AA-A-A-TAA-TTTG
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      15571  3 +     63895 A--C------A-----------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Chiropotes_albinasus.k141_2206961                           1651 303 -     15524 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tarsius_wallacei.k141_254427                                1877  3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080  3 +     70052 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50964  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18978  0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cephalopachus_bancanus.k141_1423433                         6085  3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Carlito_syrichta.NW_007259797.1                           156587  3 -    496798 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       7509 19 +     62944 TG-CAGG----TCAGTC--------------TC---C-----------------------------T-CCA
s Acinonyx_jubatus.LLWD01001279.1                           827992 20 -   1699592 GGTAAGG----TCATtc--------------tc---t-----------------------------t-aca
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     71467 19 +     87051 CA-TATG----TCAATC--------------TC---C-----------------------------T-ACA
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511269 19 -  29979442 tt-taaG----TCATTC--------------TC---C-----------------------------T-ACA
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             80002 19 -    347723 TA-TAGG----TCATTC--------------Tc---c-----------------------------t-ata
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     75172 19 -     89534 CA-TGTG----TCAGTC--------------TC---C-----------------------------T-ACA
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   15438 19 -     52922 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15358 19 -     28001 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          5856 19 -     18505 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           6708 19 -     12518 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              8284 19 +     51355 TG-CACG----TCAGTT--------------TC---C-----------------------------T-CCA
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                1393 19 -     36483 TG-CACG----TCAGTC--------------TC---C-----------------------------T-CCA
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              11845 19 +     28687 TG-CACG----TCAGTT--------------TC---C-----------------------------T-CCA
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                  358 19 +     27940 TG-TACG----TCAGTC--------------TC---C-----------------------------T-CCA
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            1402 19 -      9457 TG-CACG----TCAGTT--------------TC---C-----------------------------T-CCA
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                              358 19 +     30492 TG-CACG----TCAGTT--------------TC---C-----------------------------T-CCA
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              4353 19 +     47717 TG-CACG----TCAGTC--------------TC---C-----------------------------T-CCA
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              1085 19 +      5663 TG-TACG----TCAGTC--------------TC---C-----------------------------T-CCA
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             15537 19 +     50774 TG-TACG----TCAGTC--------------TC---C-----------------------------T-CCA
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      186032 19 +    412891 TT-CAGG----TCAGTT--------------TC---C-----------------------------C-ACA
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  16530 19 -     33861 TG-CACA----TCAGTC--------------TC---C-----------------------------T-CCA
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            16527 19 -     34016 TG-CACA----TTAGTC--------------TC---C-----------------------------T-CCA
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4298954 19 -   5030052 tg-caCA----TTAGTC--------------TC---C-----------------------------T-CCA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             16563 19 -     34685 TG-CACA----TCAGTC--------------TC---C-----------------------------T-CCA
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               29688 19 -     47192 TG-CACA----TCAGTC--------------TC---C-----------------------------T-CCA
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13289 19 +     20879 CA-TATG----TCAGTC--------------TG---C-----------------------------T-ACA
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       12126 15 +     14667 TT-CAAG----TCAGTC--------------TC---C----------------------------------
i Arctocebus_calabarensis.k141_2318572                   C 0 I 1
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5422 19 +     43469 TG-CAAG----CCAGTT--------------TC---C-----------------------------C-ACA
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  54374 19 -     92717 TG-CAGG----TCAGTC--------------AC---C-----------------------------T-ACA
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              55005 19 +     85213 TG-CAGG----TCAGTC--------------AC---C-----------------------------T-ACA
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             6412 19 -     10423 TG-TGCT----TCAGTT--------------TC---C-----------------------------T-CCA
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callithrix_geoffroyi.k119_69176                              251 19 +      5377 TG-TGTT----TCAGTC--------------TC---C-----------------------------C-CCA
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592112 19 - 189096842 TG-TGCT----TCAGTC--------------TC---C-----------------------------C-CCA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                               926 19 -     12329 TG-TGCT----TCAGTC--------------TC---C-----------------------------C-CCA
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002922 19 -  17673402 TG-CAGG----TCAGTC--------------TC---C-----------------------------T-ACA
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2335398 19 -   7040546 TG-CAGG----TCAGTC--------------TC---C-----------------------------T-ACA
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  403695 19 -   1652518 TG-CAGG----TCAGTC--------------TC---C-----------------------------T-ACA
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17799858 19 -  60362399 TG-TGGG----TCATTC--------------TC---C-----------------------------T-GTG
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                      606 19 -     43241 TG-TGGG----TCATTC--------------TC---C-----------------------------T-GTG
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9035301 19 -   9314153 TG-TGGG----TCATTC--------------TC---C-----------------------------T-GTG
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17959777 19 -  59632846 TG-TGGG----TCATTC--------------TC---C-----------------------------T-GTG
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18501074 19 +  63665305 TG-TGGG----TCATTC--------------TC---C-----------------------------T-GTG
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1699 19 -     12242 TG-TATG----TCAGTC--------------TC---C-----------------------------T-GAA
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5789 19 -     11696 TG-CAAG----CCAGTT--------------TC---C-----------------------------C-ACA
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137785 19 +    179628 TG-TATG----TCAGTC--------------TC---C-----------------------------T-CCA
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     93745 19 +    217609 tg-caag----tcagtc--------------tc---c-----------------------------t-gtg
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                         10852 19 -     11392 TG-TGCT----TCTGTC--------------TC---C-----------------------------T-CCA
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               7036 19 -      7577 TG-TGCT----TCAGTC--------------TC---C-----------------------------T-CCA
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25653457 19 +  26074798 TG-CACG----TCAGTC--------------TC---C-----------------------------T-CCA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                1395 19 +     28840 TG-CACG----TCAGTC--------------TC---C-----------------------------T-CCA
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 1120 19 +     14051 TG-CACG----TCAGTC--------------TC---C-----------------------------T-CCA
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Ceratotherium_simum.JH767749.1                          12232139 19 +  27778364 ct-cagg----tcattc--------------tc---c-----------------------------t-aaa
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3166 19 -     25243 ct-cagg----tcattc--------------tc---c-----------------------------t-aaa
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4476373 19 +   4669795 tg-cAGG----TCAGTC--------------TT---G-----------------------------T-CCA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                         875 19 +     17872 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           1532 19 -     14043 TG-CAGG----TCAGTC--------------TT---G-----------------------------T-CCA
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9565 19 +     27781 TG-CAGG----TCAGTC--------------TT---G-----------------------------T-CCA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         9733 19 -     20310 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          12713 19 +     29689 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7459 19 -     20078 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          15381 19 -     27936 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            4247 19 -     17152 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38817792 19 +  39242232 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223481 19 -  21565898 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40600 19 -     53127 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                         851 19 +     13442 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15400 19 -     27947 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         15376 19 +     17596 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          1419 19 +     14005 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1175 19 -      8501 TG-GAGA----TCTGTT--------------CC---C-----------------------------C-ACA
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             21752 19 -     52598 TG-CAGG----CCAGTC--------------GC---C-----------------------------T-ACA
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           17119 23 +     57038 TG-CAGGCCAGTCAGTC--------------TC---C-----------------------------T-ACA
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1253573 19 +   2543920 TG-TATG----TCAGTC--------------TC---C-----------------------------C-ATA
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18429360 19 -  18827391 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15796 19 -     50209 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422797 19 + 135778131 tg-cAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 18996 13 +     19366 -----------TCTGTC--------------CC---C-----------------------------C-ACA
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            174071 13 +    839153 -----------TCTGTC--------------CC---C-----------------------------C-ACA
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1911273 19 +   2368649 tg-cAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949525 19 + 200372422 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37807 19 +     84244 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17548728 19 -  53390261 tg-caGC----TCAGTC--------------TC---C-----------------------------T-GTA
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1167 19 +     23735 TG-CATG----TAAGTC--------------TC---T-----------------------------C-ATA
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      I 21 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 50706 19 +     63868 ca-tatg----tcaatc--------------tc---c-----------------------------t-aca
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11668228 19 + 224834208 CA-TATG----TCAATC--------------TC---C-----------------------------T-ACA
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               3649 12 -     19598 ------------CATTC--------------TA---C-----------------------------A-AAA
i Crocidura_indochinensis.CroInd_scaffold_37019          I 1 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29181 19 -     87169 TG-TAGG----TCATTC--------------TC---C-----------------------------T-ACA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837769 19 +   1526836 TG-TATT----CCACTC--------------GC---T-----------------------------T-ATA
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  36568 19 +     51376 TC-TATG----TCAATC--------------TC---C-----------------------------T-ACA
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            64193 19 +   2246927 TG-GAGA----TCTGTT--------------CC---C-----------------------------C-ACA
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12537955 19 -  12879189 tg-catg----ttagtc--------------tc---c-----------------------------t-aca
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630804 19 +  20541912 TG-CAGG----TCAGTT--------------TC---C-----------------------------C-ACA
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  673988 19 +   1390856 ct-cagg----ccattc--------------tc---c-----------------------------t-aaa
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6739 19 +    198055 ct-cagg----tcattc--------------tc---c-----------------------------t-aaa
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37051 19 +     67921 TA-CATG----TCAGTC--------------TC---C-----------------------------C-GTA
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Echinops_telfairi.JH980293.1                            48781242 33 + 111700974 ta-caaa----ataatttgtgAGGATCAGCCTC---T-----------------------------T-ACA
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.KE759718.1                                  11210 19 +     11740 tg-CAGG----TCAGTC--------------TC---C-----------------------------T-ACA
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1098412 18 +  10337057 TG-AAGA----TCTGA---------------AC---C-----------------------------T-ACA
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          21179 19 -    110024 TA-TATG----TCCATC--------------TC---C-----------------------------T-ATG
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 1
s Ellobius_talpinus.LOJH01081419.1                            1083 19 +      8657 CT-TATG----TCCATC--------------CC---C-----------------------------t-atg
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16329993 19 -  41312741 TG-TAGG----TCATTC--------------TC---A-----------------------------C-ACA
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2146405 17 -  14770903 -G-T-GG----TCAGTT--------------TC---C-----------------------------C-ACA
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1284248 19 +   4378816 tg-cagg----tcactc--------------tc---c-----------------------------t-aca
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18532068 19 -  39960074 tg-cagg----tcactc--------------tc---c-----------------------------t-aca
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               34097 19 +    498745 tg-cagg----tcactc--------------tc---c-----------------------------t-aca
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3328936 19 -   7059049 TG-CAGG----TCAgtc--------------tc---c-----------------------------t-ata
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21205965 19 -  21539334 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_576796                              40799 18 -     44621 TG--AGG----TCAGTC--------------TC---C-----------------------------T-ACA
i Eulemur_albifrons.k141_576796                          C 0 C 0
s Eulemur_collaris.k141_377015                                7180 18 -     16928 TG--AGG----TCAGTC--------------TC---C-----------------------------T-ACA
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              16212 18 -     25546 TG--AGG----TCAGTC--------------TC---C-----------------------------T-ACA
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            13408 18 +     26330 TG--AGG----TCAGTC--------------TC---C-----------------------------T-ACA
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14643 18 +     23973 TG--AGG----TCAGTC--------------TC---C-----------------------------T-ACA
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                13405 18 +     75513 tg--agg----tcagtc--------------tc---c-----------------------------t-aca
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 11335 18 +     97555 tg--agg----tcagtc--------------tc---c-----------------------------t-aca
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              827 18 +     13026 tg--agg----tcagtc--------------tc---c-----------------------------t-aca
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4879 18 -     17153 TG--AGG----TCAGTC--------------TC---C-----------------------------T-ACA
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              14452 18 +    111500 tg--agg----tcagtc--------------tc---c-----------------------------t-aca
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237634 20 + 206538554 GGTAAGG----TCATtc--------------tc---t-----------------------------t-aca
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20196477 20 + 205367284 GGTAAGG----TCATtc--------------tc---t-----------------------------t-aca
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 10230 20 -     36744 GGTAAGG----TCATTC--------------TC---T-----------------------------T-ACA
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             851101 19 +   3816255 CG-TATG----TTAGTC--------------TC---C-----------------------------C-ACA
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg2040                                     427275 15 -    453645 TT-CAAG----TCAGTC--------------TC---C----------------------------------
i Galago_moholi.ctg2040                                  C 0 I 1
s Galago_senegalensis.k141_631886                             4965 15 +     11339 TT-CAAG----TCAGTC--------------TC---C----------------------------------
i Galago_senegalensis.k141_631886                        C 0 I 1
s Galagoides_demidoff.k141_1711393                            2263 15 +     41679 TT-CAAG----TCAGTC--------------TC---C----------------------------------
i Galagoides_demidoff.k141_1711393                       C 0 I 1
s Galeopterus_variegatus.GalVar_scaffold_108840               1881 19 -      9135 TG-CAGG----TCAGTC--------------TC---C-----------------------------T-GCA
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            32056  7 +     49224 TG-TATG----T-----------------------------------------------------------
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              16764 19 -     32273 TG-CAGG----TCAGTC--------------TC---C-----------------------------T-CCA
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186338900 19 + 186649187 tg-cAGG----TCAGTC--------------TC---C-----------------------------T-CCA
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33295 22 +     78134 TG-TATG----TCAGTC--------------TGTGGC-----------------------------T-GAT
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 2
s Hapalemur_alaotrensis.k141_170648                           7507 18 -     19426 TG--AGG----TCAGTC--------------TC---C-----------------------------T-ACA
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12660 18 -     15286 TG--AGG----TCAGTC--------------TC---C-----------------------------T-ACA
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             14299 18 +     18253 TG--AGG----TCAGTC--------------TC---C-----------------------------T-ACA
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         14400 18 -     41752 TG--AGG----TCAGTC--------------TC---C-----------------------------T-ACA
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         14237 18 -     16460 TG--AGG----TCAGTC--------------TC---C-----------------------------T-ACA
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243018 19 +    327341 TG-TAGG----GCATTC--------------TC---C-----------------------------T-ACA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20662859 19 +  22651954 CC-TATG----TCAGTC--------------TC---C-----------------------------C-ATG
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1578 19 +      7595 TG-CAGA----TTGGCC--------------TG---C-----------------------------T-ACA
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       111191 18 +   1711038 TG-CAGG----TAAGCC--------------T----C-----------------------------T-GCA
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               42622 18 +     43066 TG-CAGG----TAAGCC--------------T----C-----------------------------T-ACA
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 I 42
s Hoolock_leuconedys.ctg274                                    435565 19 +    630532 TG-CAGG----TCAGTC--------------TC---C-----------------------------T-CCA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45721 19 +     55795 TG-TAGG----GCATTC--------------TC---C-----------------------------A-ACA
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83756 19 +    135385 TG-TATG----TCAATC--------------TC---C-----------------------------C-ATA
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7521569 19 -   7955117 ca-tgTG----TCAATT---------------G---G-----------------------------TTACA
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   23197 19 +     31101 tg-cagg----tcagtc--------------tc---c-----------------------------t-gca
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8277586 19 -   9596543 CA-TGTG----TCAGTC--------------TC---C-----------------------------T-ACA
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_50988                    15842 17 +     29960 -G-T-GG----TGAGTT--------------TC---T-----------------------------C-CCA
i Lasiurus_borealis.LasBor_scaffold_50988                I 246 C 0
s Lemur_catta.scaffold_24                                 15524752 18 -  30322482 tg--agt----tcagtc--------------tc---c-----------------------------t-aca
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        8690 19 +     64341 TA-TGCG----TCAGTC--------------TC---C-----------------------------T-CCA
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           1030 19 -     35062 TA-TGCG----TCAGTC--------------TC---C-----------------------------T-CCA
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        8717 19 +     35603 TA-TGCG----TCAGTC--------------TC---C-----------------------------T-CCA
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    30330 19 +     38576 TG-TGCA----TCAGTC--------------TT---C-----------------------------T-CCA
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         27034 19 +     66356 TG-TGCG----TCAGTC--------------TT---C-----------------------------T-CCA
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         11630 19 -     23766 TG-CAGG----TCAGTC--------------TT---C-----------------------------C-ACA
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29691 19 +     45836 TG-CAGG----TCAGTC--------------TT---C-----------------------------C-ACA
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          2229 19 +     25010 TA-CAGG----TCAGTC--------------TT---C-----------------------------C-ACA
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27623 19 +     54090 TG-CAGG----TCAGTC--------------TT---C-----------------------------C-ACA
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3043740 19 +   3914936 TG-TAGG----TCATTC--------------TC---C-----------------------------C-ACA
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     7168 19 -     14121 TG-CACA----TCAGTC--------------TC---C-----------------------------A-ACA
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1437916 19 +   1826925 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            6523 15 +     11245 TT-CAAG----TCAGTC--------------TC---C----------------------------------
i Loris_lydekkerianus.k141_2539221                       C 0 I 1
s Loris_tardigradus.ctg83                                  1005344 15 +   6120653 TT-CAAG----TCAGTC--------------TC---C----------------------------------
i Loris_tardigradus.ctg83                                C 0 I 1
s Loxodonta_africana.GL010049.1                            4218035 19 -  43346337 tg-CAGA----TTGGCT--------------CC---C-----------------------------T-ACA
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17956017 19 -  59628241 TG-TGGG----TCATTC--------------TC---C-----------------------------T-GTG
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               7731 19 +     40492 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CTA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59676990 19 +  60120075 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CTA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13506 19 -     26193 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CTA
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            81290 19 -    114318 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CTA
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  6977 19 -     23192 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CTA
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16450 19 -     29190 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CTA
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  25015 19 +     37952 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CTA
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186840104 19 + 187317192 tg-cAGG----TCAGTC--------------TT---C-----------------------------T-CTA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458667 19 -  25927173 tg-cAGG----TCAGTC--------------TT---C-----------------------------T-CTA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  80863 19 +     89720 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CTA
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 7864 19 +     20474 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CTA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   7664 19 -     14993 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CTA
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  330530 19 -    668171 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CTA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 5977 19 -     24072 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CTA
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26602 19 -     45290 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CTA
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91304 19 +     94391 tg-cagg----tcagtc--------------tc---c-----------------------------t-aca
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23938193 19 -  24302211 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352315 19 +    752769 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33103766 19 -  40650429 ca-tatg----tCAATG---------------G---G-----------------------------TTACA
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        14014 48 -    207569 TG-CAGG----TAAATC--------------TA---CAAAAAACTTTTTTTTTGTAGTTCCCTGGCT-GCA
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10733 19 +     13704 TG-TAGG----TCATTC--------------TC---A-----------------------------C-ACA
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 33414 19 +    140813 CA-TATG----TCAATC--------------TC---C-----------------------------T-ACA
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12182884 19 -  29670104 CA-TATG----TCAATc--------------tc---c-----------------------------t-aca
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                6848 19 -      7380 TG-TGCT----TCAGTT--------------TC---C-----------------------------T-CCA
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_schneideri.k141_1950671                                      6821 19 -      7356 TG-TGCT----TCAGTT--------------TC---C-----------------------------T-CCA
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18292178 19 -  93316391 TG-CAGG----TCAGTC--------------TC---C-----------------------------T-ACA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    23136 19 -    145209 TA-CAAA----ATAATA--------------TT---T-----------------------------T-GTA
i Microgale_talazaci.MicTal_scaffold_6613                I 167 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                16328 18 -     19307 TG-CAGG----TCAGT---------------TC---C-----------------------------C-ACA
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11261132 19 -  27267610 CA-TATG----TCCATC--------------tc---c-----------------------------t-aca
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1851282 19 +   8254450 TG-CAGG----CCTGTT--------------TC---C-----------------------------C-ACA
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             34962 19 +     64694 CA-CAGG----CCTGTT--------------TC---C-----------------------------C-ACA
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9899 19 -     28506 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6608 19 -      8324 TG-TAGG----TCATTC--------------TC---C-----------------------------C-ACA
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      9722 19 -     37649 TG-CAGG----TCAGTC--------------TC---C-----------------------------C-ACA
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142326 19 -    366855 TG-CAGG----TCTGTT--------------TC---C-----------------------------C-ACA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   36117 19 +     37127 TA-TAGG----GCATTC--------------TC---C-----------------------------T-ACA
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           7512 18 +     14753 TG-C-GG----TCAGTT--------------TC---C-----------------------------C-ACA
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84362029 19 - 120012414 CA-TGTG----TCAATC--------------TC---C-----------------------------T-ACA
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87651022 19 - 129401213 CA-TGTG----TCAATC--------------TC---C-----------------------------T-ACA
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31355679 19 -  89631738 CA-TGTG----TCAGTC--------------TC---C-----------------------------T-ACA
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90753085 19 - 130317789 CA-TGTG----TCAATC--------------TC---C-----------------------------T-ACA
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               302145 19 -  14710649 TG-TAGG----TCAttc--------------tc---a-----------------------------c-aaa
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71887 19 -     80779 TG-TATG----TCAGCC--------------TC---C-----------------------------T-CCA
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                281147 18 -  10118263 TG-C-GG----TCAGTT--------------TC---C-----------------------------C-ACA
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1588403 18 -   6019432 TG-T-GG----TCACTT--------------TC---C-----------------------------C-ACA
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3904499 18 -   4330536 TG-C-GG----TCAGTT--------------TC---C-----------------------------C-ACA
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_476501                         650 18 +       738 TG-T-GG----TCACTT--------------TC---C-----------------------------C-ACA
i Myotis_myotis.MyoMyo_scaffold_476501                   n 77 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189950 13 +    196477 -----------TTTGTC--------------CC---C-----------------------------C-ACA
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2034732 18 -   3037898 CA-TTTG----TCGGTC--------------TT---C-----------------------------T-AC-
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               15901 19 +     21681 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308194 19 +  31847680 TG-TAGG----TCATTC--------------TG---C-----------------------------C-ACA
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    758561 19 +    783361 TG-CAGG----TAGGGT--------------TC---C-----------------------------C-ACA
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150080 19 -   9404916 TG-TGGG----TCATTC--------------TC---C-----------------------------T-GTG
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102586888 15 - 196305487 TT-CAAG----TCAGTC--------------TC---C----------------------------------
i Nycticebus_bengalensis.LG01                            C 0 I 1
s Nycticebus_coucang.k141_1127096                              812 15 +      2075 TT-CAAG----TCAGTC--------------TC---C----------------------------------
i Nycticebus_coucang.k141_1127096                        C 0 I 1
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105762243 15 + 199412804 TT-CAAG----TCAGTC--------------TC---C----------------------------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 1
s Ochotona_princeps.JH802162.1                             1364545 19 +   3988456 CA-CACA----TCAGTA--------------TT---C-----------------------------A-ATA
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  747624 19 +  11899542 gt-tgtg----tggagg--------------ac---c-----------------------------a-cct
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                              507336 19 -   2017862 TG-TAGG----TCATTC--------------TC---C-----------------------------C-ACA
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   25810 19 +     28053 TA-TATG----TCAATC--------------TC---C-----------------------------A-ACA
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    80812 19 +    102263 CA-TATG----TCAATC--------------TC---C-----------------------------T-ATA
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 43
s Orycteropus_afer.OryAfe_flattened_line_144387              10795 19 -     18566 TG-CAGA----TCAGCT--------------TC---C-----------------------------T-ACA
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67148028 19 + 174332312 tg-CACA----TCAGTC--------------TC---C-----------------------------A-ACA
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       463029 19 -    559221 TG-TGGG----TCATTC--------------TC---C-----------------------------T-GTG
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4795 15 +      8798 TT-CAAG----TCAGTC--------------TC---C----------------------------------
i Otolemur_crassicaudatus.k141_222918                    C 0 I 1
s Otolemur_garnettii.GL873799.1                             696958 15 -   1103335 TT-CAAG----TCAGTC--------------TC---C----------------------------------
i Otolemur_garnettii.GL873799.1                          C 0 I 1
s Pan_paniscus.KQ411613.1                                    44852 19 +     80009 tg-cAGG----TCAGTC--------------TC---C-----------------------------T-CCA
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189143751 19 + 189151597 tg-cAGG----TCAGTC--------------TC---C-----------------------------T-CCA
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  151840 18 +    230217 G--TAGG----TCATTC--------------TC---T-----------------------------T-ACA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                265049 18 +  18783137 G--TAGG----TCATcc--------------tc---t-----------------------------t-aca
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4721928 18 -   8748460 G--TAGG----TCAttc--------------tc---t-----------------------------t-aca
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183443993 19 + 183742232 tg-cAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7639 19 +     20448 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20564451 19 +  20919399 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6383 19 +     41871 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     9676 19 +     27711 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                   673 19 -     11374 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13341 19 -     78924 TG-TAGC----TCATTC--------------TC---C-----------------------------T-ACA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10782 15 +     13100 TT-CAAG----TCAGTC--------------TC---C----------------------------------
i Perodicticus_ibeanus.k141_855320                       C 0 I 1
s Perodicticus_potto.k141_1092580                             9176 15 +     25941 TT-CAAG----TCAGTC--------------TC---C----------------------------------
i Perodicticus_potto.k141_1092580                        C 0 I 1
s Peromyscus_maniculatus.KI615324.1                       18195435 19 -  18517816 CA-TATG----TCAATA--------------tg---c-----------------------------c-aca
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28768 19 -     29689 CA-TATG----TCAGTC--------------TC---T-----------------------------C-GTA
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Piliocolobus_badius.k141_1234363                           44392 19 +     62158 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        39139 19 +     89929 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40555 19 +     51399 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296793 19 -  14605196 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2446 17 +     22620 -G-C-GG----TCAGTT--------------TC---C-----------------------------C-ACA
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189131896 19 + 189387572 tg-cAGG----TCTGTC--------------TC---C-----------------------------T-CCA
i Pongo_abelii.CM009266.2                                C 0 I 24609
s Pongo_pygmaeus.ctg66                                     9571503 19 +   9816681 TG-CAGG----TCTGTC--------------TC---C-----------------------------T-CCA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               74076 19 -     81375 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              5897 19 +     19060 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 14033 19 -     22811 TG-CAGA----TTGGCC--------------TG---C-----------------------------T-ACA
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2597432 18 -   4620579 TG--AGG----TCAGTC--------------TC---C-----------------------------T-ACA
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     991418 19 +   2598838 TG-CAGG----TCAGTC--------------AC---C-----------------------------T-ACA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29730 19 +     38485 TG-CAGG----TCAGTC--------------AC---C-----------------------------T-ACA
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1772 19 -     13098 TG-CAGG----TCAGTC--------------AC---C-----------------------------T-ACA
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          27251 19 +     35766 TG-CAGG----TCAGTC--------------AC---C-----------------------------T-ACA
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           5438 19 -     24134 TG-CAGG----TCAGTC--------------AC---C-----------------------------T-ACA
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        29263 19 -     67325 TG-CAGG----TCAGTC--------------AC---C-----------------------------T-ACA
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           5486 19 -      6182 TG-CAGG----TCAGTC--------------AC---C-----------------------------T-ACA
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            11060 19 -     21651 CA-TATG----TCAATC--------------TC---C-----------------------------T-ACA
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            15835 19 -     21811 TG-CAGG----GCCGTT--------------TC---C-----------------------------C-TCA
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40927 19 +     42204 TG-TAGG----TCATTC--------------TC---A-----------------------------C-ACA
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22977450 19 +  28871421 tg-cagg----tcagtc--------------tc---c-----------------------------t-aca
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                7503 19 -      8028 tG-CAGG----TCAGTC--------------TC---C-----------------------------T-ACA
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20274999 20 -  38429054 GGTAAGG----TCATTC--------------tc---c-----------------------------t-aca
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15883 19 -     91421 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7610003 19 +   7812017 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             15882 19 -     72585 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53571277 19 +  90668790 CA-TACG----TCAATC--------------TC---C-----------------------------T-ACA
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        367678 19 -   3329780 ta-caGG----TAAGCC--------------TC---C-----------------------------T-ACA
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             7593 19 -     11128 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-GCA
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236942 19 - 195417433 tg-cAGG----TCAGTC--------------TT---C-----------------------------T-GCA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672598 19 +   7961872 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-GCA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88491 19 -     96226 TG-CAGG----TCAGTC--------------TC---C-----------------------------T-ACA
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_8081                                  2006 19 +     42994 TG-TGCA----TCAGTC--------------TC---C-----------------------------T-CCA
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                              699 19 +      2253 TG-TGCG----TCAGTC--------------TC---C-----------------------------T-CCA
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               1128 19 -      8737 TG-TGCA----TCAGTC--------------TC---C-----------------------------T-CCA
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                               781 19 +      2343 TG-TGCG----TCAGTC--------------TC---C-----------------------------T-CCA
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209475660 19 + 209938924 TG-TGCA----TCAGTC--------------TC---C-----------------------------T-CCA
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_374627                                 9362 19 -      9399 TG-TGCG----TCAGTC--------------TC---C-----------------------------T-CCA
i Saguinus_mystax.k141_374627                            C 0 N 0
s Saimiri_boliviensis.NW_024100920.1                     119951729 19 - 121099817 tg-cACG----TCAGTC--------------GC---C-----------------------------T-CCA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24071 19 +     46362 TG-CACG----TCAGTC--------------GC---C-----------------------------T-CCA
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               24166 19 +     45824 TG-CACG----TCAGTC--------------GC---C-----------------------------T-CCA
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             40845 19 -     64574 TG-CACG----TCAGTC--------------GC---C-----------------------------T-CCA
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               3918 19 -     23631 TG-CACG----TCAGTC--------------GC---C-----------------------------T-CCA
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 24062 19 -     61129 TG-CACG----TCAGTC--------------GC---C-----------------------------T-CCA
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5421411 19 -   5703754 TG-CACG----TCAGTC--------------TC---C-----------------------------T-CCA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          56652 19 -     80660 TG-CACG----TCAGTC--------------TC---C-----------------------------T-CCA
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153872 19 -    313613 TG-CAGC----TCTGTC--------------TC---C-----------------------------T-ACA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                          774 19 -     12572 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27624 19 +     39453 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            8142 19 +     27826 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             7664 19 -     19483 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                       965 19 -     12762 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                            826 19 +     13763 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                      964 19 -     30804 CA-TGTG----TCAATC--------------TC---C-----------------------------T-ACA
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               4433 19 +   1910179 TG-CAGG----TCAGCC--------------TC---C-----------------------------T-ACA
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13651681 19 -  18376816 TG-CAGG----TCAGTC--------------TC---C-----------------------------T-ACT
i Sorex_araneus.JH798187.1                               C 0 I 1
s Spermophilus_dauricus.KZ294078.1                         1954622 19 -   3870691 ca-tatg----tCAATT---------------G---G-----------------------------TTACA
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             31412 18 +     97271 T--TAGG----TCATTC--------------TC---C-----------------------------T-ACA
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              19020 19 -    196729 TG-TAGG----ACATTC--------------TC---C-----------------------------T-ACA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6811492 19 +  69701581 TG-AAGG----TCAGTC--------------TC---C-----------------------------T-ATG
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                11488 19 +     41958 TG-CAGG----TCAGTT--------------GC---C-----------------------------C-ACA
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73309 13 +    116680 -----------TTTGTC--------------CC---C-----------------------------C-ACA
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      119468 13 -    156842 ct-cagg----tcattc--------------t---------------------------------------
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 3
s Tapirus_terrestris.TapTer_scaffold_755                    387924 13 +    539355 ct-cagg----tcattc--------------t---------------------------------------
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 3
s Theropithecus_gelada.CM009954.1                        186429311 19 + 186847797 tg-cAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106073 19 +    114563 CA-CATG----TCAGTC--------------TC---T-----------------------------C-GAA
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   7065 19 +      8208 TG-GAGA----TCTGTT--------------CC---C-----------------------------C-ACA
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81882 19 +    610378 TG-CAGG----TCAGTT--------------TC---C-----------------------------C-ACA
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         11715 19 -     20410 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                       829 19 -     12674 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       11816 19 +     19930 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       8227 19 -     19997 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48366 19 -     60166 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        15838 19 -     27529 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     15782 19 -     18194 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9494 19 -     21137 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    8197 19 -     10723 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7369 19 +      9834 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        25682 19 +     32220 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5939784 19 +   6242583 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        9035 19 +     20839 TG-CAGG----TCAGTC--------------TT---C-----------------------------T-CCA
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4293934 19 +  10818551 TG-CAGA----TTGGCC--------------TC---C-----------------------------T-ACA
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2156489 19 +   4065304 TG-CAGG----TTGGTC--------------TC---C-----------------------------T-ACA
i Tupaia_chinensis.KB320699.1                            C 0 I 3
s Tupaia_tana.TupTan_flattened_line_97126                     9932 19 -     10553 TT-CAGG----TCGGTC--------------TC---C-----------------------------T-ACA
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 3
s Uropsilus_gracilis.UroGra_scaffold_12083                   53983 19 -     77625 TG-CAGC----TCAGTC--------------TC---C-----------------------------T-ACA
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4851129 19 -   5085361 TT-TAAG----TCATTC--------------TC---C-----------------------------T-ACA
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  12097 18 +     50397 TT--AGG----TCAGTC--------------TC---C-----------------------------T-ACA
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             12156 18 +     24756 TT--AGG----TCAGTC--------------TC---C-----------------------------T-ACA
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5372455 19 -   5488506 TG-CAGG----TCAATC--------------TC---C-----------------------------T-ACA
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 11480 19 -     43706 TG-TGGG----TCATTC--------------TC---C-----------------------------T-GTG
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          1744 20 +    224448 CA-TACG----TTAGTC--------------TG---C-----------------------------TTaaa
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 8
e Chiropotes_albinasus.k141_2206961                           1651 303 -     15524 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12276  0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      15574  0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Tursiops_truncatus.MRVK01000835.1                       15738584  0 +  33153633 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1641  0 -      1748 C
e Tarsius_wallacei.k141_254427                                1877  3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080  3 +     70052 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  5968  0 +     55207 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35090  0 +     35617 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9384  0 +     63832 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265385  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      174468  0 -    191736 C
e Ovis_aries.CM001607.2                                   17586491  0 +  44047080 C
e Orcinus_orca.KB316932.1                                  2782345  0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77229  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866422  0 +   7148211 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1379 13 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27466  0 -    437263 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3961  0 +     10310 C
e Manis_pentadactyla.KN006162.1                              50964  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              18978  0 +    737560 C
e Lipotes_vexillifer.KE559953.1                             268344  0 -    662738 C
e Kogia_breviceps.KogBre_flattened_line_192630                2650  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23293  0 +     23964 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516  0 +     36099 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609312  0 -    660261 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25689  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11752  0 +    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       311347  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812076  0 +  35494412 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cephalopachus_bancanus.k141_1423433                         6085  3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Carlito_syrichta.NW_007259797.1                           156587  3 -    496798 I
e Capra_hircus.CM004588.1                                 18061030  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830310  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2819682  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084014  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125932  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273376  0 +  48749331 C
e Bison_bison.KN261452.1                                    200171  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27115  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2905  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192440  0 +  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98675  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          676192  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       7528 62 +     62944 G---A-AAAA-----------------------------CCTCCAATG-GCTCTTTA-CTCCT-GCC-AA-A-GGTTA---AAA-CCTATTTAACAAGTCAAAAA
s Acinonyx_jubatus.LLWD01001279.1                           828012 40 -   1699592 g---a-a---aa-aa------------------------attccaatg-gcTCCCAA-CT----GCC-CA-A-GATTA---TAC---------------------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 20
s Acomys_cahirinus.AcoCah_scaffold_12655                     71486 40 +     87051 AA--A-T-----------------------------AAACCTCAC-CA-GCCCCTTG-CC----GCC-AA-G-GGTCA---AAA-C-------------------
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 21
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511288 39 -  29979442 G---A-A-----------------------------AAAATTCCAATG-GCTCCCAA-AT----GTC-AA-A-GGCCA---AAA---------------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 21
s Ailurus_fulgens.LNAC01001112.1                             80021 40 -    347723 g---a-a---aa-aa------------------------attccaatg-gcTCCCAA-AT----GTC-AA-A-GGTCA---AAA---------------------
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 21
s Allactaga_bullata.AllBul_scaffold_9566                     75191 42 -     89534 AAA-A-G-----------------------------AATCTTCTAGCT-ACTACTTA-CT----GTC-AA-A-GGTCA---AAA-C-------------------
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 21
s Allenopithecus_nigroviridis.k141_3361533                   15457 62 -     52922 G---A-GAAA-----------------------------CCTCCGATG-GTTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACGGGTCAAAAA
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15377 62 -     28001 G---A-GAAA-----------------------------CCTCCGAGG-GCTCCTTA-CTACT-GCT-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAG
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          5875 62 -     18505 G---A-GAAA-----------------------------CCTCCGAGG-GCTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAATAGGTCAAAAA
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           6727 62 -     12518 G---A-GAAA-----------------------------CCTCCGAGG-GCTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAATAGGTCAAAAA
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              8303 62 +     51355 G---A-AAAA-----------------------------CCTCCAATG-GCTCTTTA-CTACT-GCC-AA-A-GATGA---AAA-CTGATTTAACAGGTCAAAAA
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                1412 62 -     36483 G---A-AAAA-----------------------------CCTCCAATG-GCTCTTTA-CTACT-GCC-AA-A-GATGA---AAA-CTGATTTAACAGGTCAAAAA
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              11864 62 +     28687 G---A-AAAA-----------------------------CCTCCAATG-GCTCTTTA-CTACT-GCC-AA-A-GATGA---AAA-CCGATTTAACAGGTCAAAAA
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                  377 62 +     27940 G---A-AAAA-----------------------------CCTCCAATG-GCTCTTTA-CTACT-GCC-AA-A-GATGA---AAA-CTGATTTAACAGGTCAAAAA
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            1421 62 -      9457 G---A-AAAA-----------------------------CCTCCAATG-GCTCTTTA-CTACT-GCC-AA-A-GATGA---AAA-CCGATTTAACAGGTCAAAAA
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                              377 62 +     30492 G---A-AAAA-----------------------------CCTCCAATG-GCTCTTTA-CTACT-GCC-AA-A-GATGA---AAA-CTGATTTAACAGGTCAAAAA
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              4372 62 +     47717 G---A-AAAA-----------------------------CCTCCAATG-GCTCTTCA-CTACT-GCC-AA-A-GATGA---AAA-CCGATTTAACAGGTCAAAAA
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              1104 62 +      5663 G---A-AAAA-----------------------------CCTCCAATG-GCTCTTTA-CTACT-GCC-AA-A-GATGA---AAA-CTGATTTAACAGGTCAAAAA
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             15556 62 +     50774 G---A-AAAA-----------------------------CCTCCAATG-GCTCTTTA-CTACT-GCC-AA-A-GATGA---AAA-CTGATTTAACAGGTCAAAAA
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          676192 34 -   2318259 ---------------------------------------CCTACAGTG-GCTCCCTA-CT----GAC-CG-T-GGTCA---AAA-C-------------------
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 21
s Anoura_caudifer.AnoCau_scaffold_1412                      186051 40 +    412891 G---A-A-----------------------------AAGCTTTCGATG-GCTCCTGA-CT----GCC-AA-A-GATCA---AAA-C-------------------
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 21
s Antilocapra_americana.AntAmePen_scaffold_12469             98675 34 -    100397 ---------------------------------------CCTACAATG-GCTCCCTG-GT----GAC-CA-A-GGTCA---AAA-C-------------------
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 I 21
s Aotus_azarae.k141_3104676                                  16549 62 -     33861 G---A-AAAA-----------------------------CCTCCAGTG-GCTCTTTA-CTACT-GCC-AA-A-GATTA---AAA-CCGATTTAATAGGTCAAAAA
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            16546 62 -     34016 G---A-AAAA-----------------------------CCTCCAGTG-GCTCTTTA-CTACT-GCC-AA-A-GATTA---AAA-CCGATTTAATAGGTCAAAAA
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4298973 62 -   5030052 G---A-AAAA-----------------------------CCTCCAGTG-GCTCTTTA-CTACT-GCC-AA-A-GATTA---AAA-CCGATTTAATAGgtcaaaaa
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             16582 62 -     34685 G---A-AAAA-----------------------------CCTCCAGTG-GCTCTTTA-CTACT-GCC-AA-A-GATTA---AAA-CCAATTTAATAGGTCAAAAA
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               29707 62 -     47192 G---A-AAAA-----------------------------CCTCCAGTG-GCTCTTTA-CTACT-GCC-AA-A-GATTA---AAA-CCAATTTAATAGGTCAAAAA
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13308 40 +     20879 G---A-A-----------------------------TCACCTGCAATG-GCTCCTTG-AT----ACC-CA-A-GGTCA---AAA-C-------------------
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 21
s Arctocebus_calabarensis.k141_2318572                       12142 25 +     14667 GAAAA-A--------------------------------CCTACAAGG-GCTCCTTA-CT---------------------------------------------
i Arctocebus_calabarensis.k141_2318572                   I 1 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5441 40 +     43469 G---A-A-----------------------------AAGCTTTCGATG-GCTCCCTA-CT----GTC-AA-A-GATCA---AAA-C-------------------
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 21
s Avahi_laniger.k141_765380                                  54393 40 -     92717 GAGAA-A--------------------------------TCTCCAATG-GCTCCTGA-CT----GCC-AA-A-AGTCA---AAA-C-------------------
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              55024 40 +     85213 GAGAA-A--------------------------------TCTCCAATG-GCTCCTGA-CT----GCC-AA-A-AGTCA---AAA-C-------------------
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15192440 34 +  23207421 ---------------------------------------CCTCCAATG-GCTCCCTA-CT----GCC-AA-A-GGTCA---AAA-C-------------------
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 2
s Balaenoptera_bonaerensis.DF707048.1                         2905 34 -     18090 ---------------------------------------CCTCCAATG-GCTCCCTA-CT----GCC-AA-A-GGTCA---AAA-C-------------------
i Balaenoptera_bonaerensis.DF707048.1                    C 0 I 2
s Beatragus_hunteri.BeaHun_scaffold_50177                    27115 34 +     34529 ---------------------------------------CCTACAGTG-GCTCCCTA-CT----GAC-CG-T-GGTCA---AAA-C-------------------
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 21
s Bison_bison.KN261452.1                                    200171 34 -    288883 ---------------------------------------CCTACAATG-GCTTCCTA-AT----GAC-CA-T-GGTCA---AAA-C-------------------
i Bison_bison.KN261452.1                                 C 0 I 21
s Bos_indicus.CM003047.1                                  20273376 34 +  48749331 ---------------------------------------CCTACAATG-GCTTCCTA-AT----GAC-CA-T-GGTCA---AAA-C-------------------
i Bos_indicus.CM003047.1                                 C 0 I 21
s Bos_mutus.JH880303.1                                     1125932 34 -   1948126 ---------------------------------------CCTACAATG-GCTTCCTA-AT----GAC-CA-T-GGTCA---AAA-C-------------------
i Bos_mutus.JH880303.1                                   C 0 I 21
s Bos_taurus.CM000203.6                                   18084014 34 +  45695690 ---------------------------------------CCTACAATG-GCTTCCTA-AT----GAC-CA-T-GGTCA---AAA-C-------------------
i Bos_taurus.CM000203.6                                  C 0 I 21
s Bubalus_bubalis.KI419123.1                               2819682 34 +   4408762 ---------------------------------------CTTACAAGG-GCTCCCTA-CC----GAC-CA-T-GGTCA---AAA-C-------------------
i Bubalus_bubalis.KI419123.1                             C 0 I 21
s Callibella_humilis.k141_1278103                             6431 62 -     10423 G---G-AAAA-----------------------------CCTCCAGTG-GCTCTTTA-CTACA-GCT-GA-A-AATTA---AAA-CCGATTTAACAGGTCAAAAA
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callithrix_geoffroyi.k119_69176                              270 62 +      5377 G---G-AAAA-----------------------------CCTCCAGTG-GCTCTTTA-CTACA-GCT-GA-A-AATTA---AAA-CCGATTTAACAAGTCAAAAA
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592131 62 - 189096842 G---G-AAAA-----------------------------CCTCCAGTG-GCTCTTTA-CTACA-GCT-GA-A-AATTA---AAA-CCGATTTAACAAGTCAAAAA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                               945 62 -     12329 G---G-AAAA-----------------------------CCTCCAGTG-GCTCTTTA-CTACA-GCT-GA-A-AATTA---AAA-CCGATTTAACAAGTCAAAAA
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002941 40 -  17673402 G---A-A-----------------------------ACAGCTCCAATG-GCTGCCTA-CT----GCC-AA-A-TGTCA---AAA-C-------------------
i Camelus_bactrianus.KN276810.1                          C 0 I 14
s Camelus_dromedarius.KN272107.1                           2335417 40 -   7040546 G---A-A-----------------------------ACAGCTCCAATG-GCTGCCTA-CT----GCC-AA-A-TGTCA---AAA-C-------------------
i Camelus_dromedarius.KN272107.1                         C 0 I 14
s Camelus_ferus.KB017975.1                                  403714 40 -   1652518 G---A-A-----------------------------ACAGCTCCAATG-GCTGCCTA-CT----GCC-AA-A-TGTCA---AAA-C-------------------
i Camelus_ferus.KB017975.1                               C 0 I 14
s CanFam4.chr16                                           17799877 39 -  60362399 G---A-A-----------------------------AAAATTCTAATG-GGCCCCAA-CT----GTC-AA-A-GGTCA---AAA---------------------
i CanFam4.chr16                                          C 0 I 21
s Canis_lupus_VD.CanFam_VD_scaffold_27089                      625 39 -     43241 G---A-A-----------------------------AAAATTCTAATG-GGCCCCAA-CT----GTC-AA-A-GGTCA---AAA---------------------
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 I 21
s Canis_lupus_dingo.QKWQ01000480.1                         9035320 39 -   9314153 G---A-A-----------------------------AAAATTCTAATG-GGCCCCAA-CT----GTC-AA-A-GGTCA---AAA---------------------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 21
s Canis_lupus_familiaris.chr16                            17959796 39 -  59632846 G---A-A-----------------------------AAAATTCTAATG-GGCCCCAA-CT----GTC-AA-A-GGTCA---AAA---------------------
i Canis_lupus_familiaris.chr16                           C 0 I 21
s Canis_lupus_orion.HG994398.1                            18501093 39 +  63665305 G---A-A-----------------------------AAAATTCTAATG-GGCCCCAA-CT----GTC-AA-A-GGTCA---AAA---------------------
i Canis_lupus_orion.HG994398.1                           C 0 I 21
s Capra_aegagrus.CM003241.1                               18830310 34 +  46296322 ---------------------------------------CCTACAGTG-GCTCCCTA-CT----GAC-CG-T-GGTCA---AAA-C-------------------
i Capra_aegagrus.CM003241.1                              C 0 I 21
s Capra_hircus.CM004588.1                                 18061030 34 -  44709034 ---------------------------------------CCTACAGTG-GCTCCCTA-CT----GAC-CG-T-GGTCA---AAA-C-------------------
i Capra_hircus.CM004588.1                                C 0 I 21
s Capromys_pilorides.CapPil_scaffold_65020                    1718 23 -     12242 G---A-G-----------------------------AAACTTCCAAT-AGAACCCTG------------------------------------------------
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 20
s Carollia_perspicillata.CarPer_scaffold_92756                5808 40 -     11696 G---A-A-----------------------------AAGCTTTCGGTG-GCTCCCTG-CT----GCC-AC-A-GATCA---AAA-C-------------------
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 21
s Castor_canadensis.CasCan_scaffold_2074                    137804 41 +    179628 G---A-A----------------------------AAAACTTCCAATG-ACTCCTTA-CA----GCC-AA-A-TGTCA---AAA-C-------------------
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 21
s Catagonus_wagneri.CatWag_scaffold_2839                     93764 38 +    217609 g---a-a---aa-a-------------------------accctactg-gct--CTA-TT----GCC-AA-A-GGTCA---AAA-C-------------------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 490
s Cebuella_niveiventris.k141_1251222                         10871 62 -     11392 G---G-AAAA-----------------------------CCTCCAGTG-GCTCTTTA-CTACA-GCT-GA-A-AATTA---AAA-CCAATTTAACAAGTCAAAAA
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               7055 62 -      7577 G---G-AAAA-----------------------------CCTCCAGTG-GCTCTTTA-CTACA-GCT-GA-A-AATTA---AAA-CCAATTTAACAAGTCAAAAA
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25653476 61 +  26074798 G---A-AAGA-----------------------------CCTCCA-TG-ACTCTTTA-CTACT-GCC-AA-A-GATTA---AAA-CCGATTTAACAGGTCAAAAA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                1414 61 +     28840 G---A-AAGA-----------------------------CCTCCA-TG-ACTCTTTA-CTACT-GCC-AA-A-GATTA---AAA-CCGATTTAACAGGTCAAAAA
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 1139 61 +     14051 G---A-AAGA-----------------------------CCTCCA-TG-ACTCTTTA-CTACT-GCC-AA-A-GATTA---AAA-CCGATTTAACAGGTCAAAAA
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Ceratotherium_simum.JH767749.1                          12232158 40 +  27778364 g---g-a---aa-a-------------------------tctccaatg-gctccctg-tt----gtc-aa-a-ggtca---aaa-t-------------------
i Ceratotherium_simum.JH767749.1                         C 0 I 21
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3185 40 -     25243 g---g-a---aa-a-------------------------tctccaatg-gctcccTG-TT----GCC-AA-A-GGTCA---AAA-T-------------------
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 I 21
s Cercocebus_atys.KQ010504.1                               4476392 62 +   4669795 G---A-GAAA-----------------------------CCTCCGATG-GTTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                         894 62 +     17872 G---A-GAAA-----------------------------CCTCCGATG-GTTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           1551 62 -     14043 G---A-GAAA-----------------------------CCTCCGATG-GTTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9584 62 +     27781 G---A-GAAA-----------------------------CCTCCGATG-GTTCCTTA-CTACT-GCT-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         9752 62 -     20310 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          12732 62 +     29689 G---A-GAAA-----------------------------CCTCCGATG-GTTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7478 62 -     20078 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          15400 62 -     27936 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            4266 62 -     17152 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38817811 62 +  39242232 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223500 62 -  21565898 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40619 62 -     53127 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                         870 62 +     13442 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15419 62 -     27947 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         15395 62 +     17596 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          1438 62 +     14005 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1194 28 -      8501 G---A-A-----------------------------AATTCTCCAATG-CTTCCCTA-CT----GCC--------------------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 I 26
s Cheirogaleus_major.k141_333249                             21771 40 -     52598 GAGAA-A--------------------------------CCTCCAATG-GCTCCTGA-CT----GTC-AA-A-AGTCA---AAA-C-------------------
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           17142 40 +     57038 GAGAA-A--------------------------------CCTCCCATG-GCTCCTGA-CT----GTC-AA-A-AGTCA---AAA-C-------------------
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1253592 23 +   2543920 G---A-G-----------------------------AAACTTCCAAT-GGCTCCTTG------------------------------------------------
i Chinchilla_lanigera.JH722012.1                         C 0 I 20
s Chlorocebus_aethiops.ctg25                              18429379 62 -  18827391 G---A-GAAA-----------------------------CCTCCGATG-GTTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15815 62 -     50209 G---A-GAAA-----------------------------CCTCCGATG-GTTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422816 62 + 135778131 G---A-GAAA-----------------------------CCTCCGATG-GTTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 19009 28 +     19366 G---A-A-----------------------------AAATCTCCAACA-CTTCCTTA-CT----GCC--------------------------------------
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 I 26
s Choloepus_hoffmanni.KN194906.1                            174084 28 +    839153 G---A-A-----------------------------AAATCTCCAACA-CTTCCTTA-CT----GCC--------------------------------------
i Choloepus_hoffmanni.KN194906.1                         C 0 I 26
s Colobus_angolensis.KN981557.1                            1911292 62 +   2368649 G---A-GAAA-----------------------------CCTCTGACG-GCTCCTTA-CTACT-GCC-GG-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949544 62 + 200372422 G---A-GAAA-----------------------------CCTCCGACG-GCTCCTTA-CTACT-GCC-GG-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37826 62 +     84244 G---A-GAAA-----------------------------CCTCCGACG-GCTCCTTA-CTACT-GCC-GG-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17548747 40 -  53390261 G---A-A-----------------------------AAACCTT--GTG-A-TTCCTA-CT----GTT-AA-A-TATGATATGAC-C-------------------
i Condylura_cristata.JH655891.1                          C 0 I 21
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1186 40 +     23735 G---A-A-----------------------------AAACCTCCAATA-ACTTTCTA-TA---GGAC-AT-A-TGTCA---AAA---------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 I 2
s Cricetomys_gambianus.CriGam_scaffold_18520                 50725 41 +     63868 a--aa-t---aa-a-------------------------cctccagtg-gcttctta-CT----GTC-AA-A-GGTCA---AAA-C-------------------
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 21
s Cricetulus_griseus.LT883664.1                           11668247 39 + 224834208 AA--A-A-------------------------------ACCTCCAGTG-ACTCTTTA-CT----GCC-AA-A-GGTCA---AAA-C-------------------
i Cricetulus_griseus.LT883664.1                          C 0 I 14
s Crocidura_indochinensis.CroInd_scaffold_37019               3661 19 -     19598 ----A-A-----------------------------AGATCTCAGGTG-ATTTC---------------------------------------------------
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 I 33
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29200 39 -     87169 G---A-A-----------------------------AAAATTCCAATG-GCTCCCAA-CT----GCC-AA-A-GGTCA---TAA---------------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 20
s Ctenodactylus_gundi.CteGun_scaffold_65                    837788 40 +   1526836 A---T-G-----------------------------AAGCCTCCGGTG-GCTCCTCA-CC----GCC-AA-A-GGTCA---ACA-G-------------------
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 15
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  36587 23 +     51376 G---A-G-----------------------------AAACTTCCAAT-GGATTCCTG------------------------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 19
s Dasypus_novemcinctus.JH564415.1                            64212 28 +   2246927 G---A-A-----------------------------AAATCTCCAATG-CTTCCCTC-CT----GCC--------------------------------------
i Dasypus_novemcinctus.JH564415.1                        C 0 I 26
s Daubentonia_madagascariensis.ctg71                      12537974 40 -  12879189 gaaaa-a--------------------------------cctccaatg-gctccTGA-CT----GCC-AA-A-AGTCA---AAA-C-------------------
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16812076 34 +  35494412 ---------------------------------------CCTCCAATG-GCTCCCTA-CT----GCC-AG-A-GGTCA---AAA-C-------------------
i Delphinapterus_leucas.KZ290073.1                       C 0 I 2
s Desmodus_rotundus.KZ672289.1                             8630823 39 +  20541912 G---A-A-----------------------------GAGCTTTTGATG-GCTCCCTG-AT----GCC-GA-A-GATCA---AAA---------------------
i Desmodus_rotundus.KZ672289.1                           C 0 I 3
s Dicerorhinus_sumatrensis.PEKH010002091.1                  674007 40 +   1390856 g---g-a---aa-a-------------------------cctccaatg-gctccctg-tt----acc-aa-a-ggtca---aaa-c-------------------
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 21
s Diceros_bicornis.DicBicMic_scaffold_5955                    6758 40 +    198055 g---g-a---aa-a-------------------------tctccaatg-gttccctg-tt----gcc-aa-a-ggtca---aaa-t-------------------
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 21
s Dinomys_branickii.DinBra_scaffold_21862                    37070 23 +     67921 G---A-G-----------------------------AACCTTCCAGT-GGCTCCCTG------------------------------------------------
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 20
s Echinops_telfairi.JH980293.1                            48781275 40 + 111700974 G---A-T-----------------------------AAATCCCTATTG-CCTCCTTC-CT----GACAA--A-GGCCA---AGA-C-------------------
i Echinops_telfairi.JH980293.1                           C 0 I 12
s Eidolon_helvum.KE759718.1                                  11229 40 +     11740 G---G-A-----------------------------AAACCTCCAATA-GCTCCCAA-CT----GCC-AA-A-TGTCA---AAA-C-------------------
i Eidolon_helvum.KE759718.1                              C 0 I 21
s Elaphurus_davidianus.JRFZ01104969.1                       311347 34 +    607251 ---------------------------------------CCTACAATG-GCTCCCTA-CT----GAC-CA-T-GCTCA---AAA-C-------------------
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 21
s Elephantulus_edwardii.JH947257.1                         1098430 32 +  10337057 G---G-T-----------------------------ATATTTCCAA----------T-TA----Tgttgg-a-aataa---aat-t-------------------
i Elephantulus_edwardii.JH947257.1                       C 0 I 26
s Ellobius_lutescens.LOEQ01008920.1                          21199 40 -    110024 ------A-------------------------AAAAAACCCTCCCGTG-GCTCTTTA-CC----CCC-AA-A-GGT-----AAA-C-------------------
i Ellobius_lutescens.LOEQ01008920.1                      I 1 I 30
s Ellobius_talpinus.LOJH01081419.1                            1102 43 +      8657 g--ga-a---aa-aaaac---------------------cctcccaTG-GCTCTTTA-CC----ACC-AA-A-GGT-----AAA-C-------------------
i Ellobius_talpinus.LOJH01081419.1                       C 0 I 30
s Enhydra_lutris.KZ291758.1                               16330012 39 -  41312741 G---A-A-----------------------------AAAATTTCAATG-GCTCCAGA-AT----GTC-AA-A-GGTCA---AAA---------------------
i Enhydra_lutris.KZ291758.1                              C 0 I 21
s Eptesicus_fuscus.JH977646.1                              2146422 40 -  14770903 G---A-A-----------------------------AACCTTTCAATG-GCTCACCG-CT----GCC-CA-A-Ggtca---aaa-t-------------------
i Eptesicus_fuscus.JH977646.1                            C 0 I 19
s Equus_asinus.JREZ01000139.1                              1284267 40 +   4378816 g---a-a---aa-a-------------------------cctccaatg-gctcccta-tt----gcc-aA-A-GGTCA---AAA-C-------------------
i Equus_asinus.JREZ01000139.1                            C 0 I 21
s Equus_caballus.CM000403.2                               18532087 40 -  39960074 g---a-a---aa-a-------------------------cctccaatg-gctcccta-tt----gcc-aA-A-GGTCA---AAA-C-------------------
i Equus_caballus.CM000403.2                              C 0 I 21
s Equus_przewalskii.KK951119.1                               34116 40 +    498745 g---a-a---aa-a-------------------------cctccaatg-gctcccta-tt----gcc-aA-A-GGTCA---AAA-C-------------------
i Equus_przewalskii.KK951119.1                           C 0 I 21
s Erinaceus_europaeus.JH835339.1                           3328955 48 -   7059049 ----a-a---aa-----------taaaacaaaa------cctacACTG-ACTTTTGA-CT----ACC-AG-A-AGTCA---TAA-T-------------------
i Erinaceus_europaeus.JH835339.1                         C 0 I 17
s Erythrocebus_patas.Contig38                             21205984 62 -  21539334 G---A-GAAA-----------------------------CCTCCGAGG-GCTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11752 34 +    133382 ---------------------------------------CCTCCAATG-GCTCCCTA-CT----GTC-GA-A-GGTCA---AAA-C-------------------
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 2
s Eubalaena_japonica.EubJap_flattened_line_31514             25689 34 -     44125 ---------------------------------------CCTCCAATG-GCTCCCTA-CT----GCC-AA-A-GGTCA---AAA-C-------------------
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 I 2
s Eulemur_albifrons.k141_576796                              40817 40 -     44621 GAGAA-G--------------------------------CCTCCAATG-GCTCCTGA-CT----GCC-AA-A-AGTCA---AAA-C-------------------
i Eulemur_albifrons.k141_576796                          C 0 C 0
s Eulemur_collaris.k141_377015                                7198 40 -     16928 GAGAA-G--------------------------------CCTCCAATG-GCTCCTGA-CT----GCC-AA-A-AGTCA---AAA-C-------------------
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              16230 40 -     25546 GAGAA-G--------------------------------CCTCCAATG-GCTCCTGA-CT----GCC-AA-A-AGTCA---AAA-C-------------------
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            13426 40 +     26330 GAGAA-G--------------------------------CCTCCAATG-GCTCCTGA-CT----GCC-AA-A-AGTCA---AAA-C-------------------
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14661 40 +     23973 GAGAA-G--------------------------------CCTCCAATG-GCTCCTGA-CT----GCC-AA-A-AGTCA---AAA-C-------------------
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                13423 40 +     75513 gagaa-g--------------------------------cctccaatg-gctccTGA-CT----GCC-AA-A-AGTCA---AAA-C-------------------
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 11353 40 +     97555 gagaa-g--------------------------------cctccaatg-gctccTGA-CT----GCC-AA-A-AGTCA---AAA-C-------------------
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              845 40 +     13026 gagaa-g--------------------------------cctccaatg-gctcctaa-ct----gcc-aa-a-agtca---aaa-c-------------------
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4897 40 -     17153 GAGTA-G--------------------------------CCTCCAATG-GCTCCTGA-CT----GCC-AA-A-AGTCA---AAA-C-------------------
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              14470 40 +    111500 gagaa-g--------------------------------cctccaatg-gctccTGA-CT----GCC-AA-A-AGTCA---AAA-C-------------------
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237654 40 + 206538554 g---a-a---aa-aa------------------------attccaatg-gcTCCCAA-CT----GCC-AA-A-GATTA---TAA---------------------
i Felis_catus.CM001381.2                                 C 0 I 20
s Felis_catus_fca126.CM031415.1                           20196497 40 + 205367284 g---a-a---aa-aa------------------------attccaatg-gcTCCCAA-CT----GCC-AA-A-GATTA---TAA---------------------
i Felis_catus_fca126.CM031415.1                          C 0 I 20
s Felis_nigripes.FelNig_flattened_line_20823                 10250 40 -     36744 G---A-A----------------------------AAAAATTCCAATG-GCTCCCAA-CT----GCC-AA-A-GATTA---TAA---------------------
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 20
s Fukomys_damarensis.KN121974.1                             851120 23 +   3816255 G---A-G-----------------------------AAACTTTCAGA-GGCTCTTTA------------------------------------------------
i Fukomys_damarensis.KN121974.1                          C 0 I 20
s Galago_moholi.ctg2040                                     427291 40 -    453645 GAAAA-A--------------------------------CCTACAAGG-CCTCCTTA-CT----GCC-AA-A-AGTTG---AAG-A-------------------
i Galago_moholi.ctg2040                                  I 1 C 0
s Galago_senegalensis.k141_631886                             4981 40 +     11339 GAAAA-A--------------------------------CCTACAAGG-GCTCCTTA-CT----GCC-AA-A-AGTTG---AAG-A-------------------
i Galago_senegalensis.k141_631886                        I 1 C 0
s Galagoides_demidoff.k141_1711393                            2279 40 +     41679 GAAAA-A--------------------------------CCTACAAGG-GCTCCTTA-CT----GCC-AA-A-AGTTG---AAG-A-------------------
i Galagoides_demidoff.k141_1711393                       I 1 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1900 40 -      9135 G---A-A-----------------------------AAACCTTCAAAG-TCTCCTTA-CT----GCC-AA-A-GGTCA---AAG-A-------------------
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 I 21
s Giraffa_tippelskirchi.LVKQ01S007888.1                     609312 34 -    660261 ---------------------------------------CCTACAATG-GCTCCCTA-CT----GAC-CA-A-GGTCA---AAA-C-------------------
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 I 21
s Gorilla_beringei.k141_3596273                              16783 62 -     32273 G---A-AAAA-----------------------------CCTCCAATG-GCTCTTTA-CTCCT-GCC-AA-A-GGTTA---AAA-CCTATTTAACAGGTCAAAAA
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186338919 62 + 186649187 G---A-AAAA-----------------------------CCTCCAATG-GCTCTTTA-CTCCT-GCC-AA-A-GGTTA---AAA-CCTATTTAACAGGTCAAAAA
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33319 34 +     78134 ---------------------------------------ATCTCAATT-ACTCCTTA-CT----GTC-AA-A-GGTCA---AAA-C-------------------
i Graphiurus_murinus.GraMur_scaffold_10447               I 2 I 21
s Hapalemur_alaotrensis.k141_170648                           7525 40 -     19426 GAGAA-G--------------------------------CCTCCAATG-GCTCCTGA-CT----GCC-AA-A-AGTCA---AAA-C-------------------
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12678 40 -     15286 GAGAA-G--------------------------------CCTCCAATG-GCTCCTGA-CT----GCC-AA-A-AGTCA---AAA-C-------------------
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             14317 40 +     18253 GAGAA-G--------------------------------CCTCCAATG-GCTCCTGA-CT----GCC-AA-A-AGTCA---AAA-C-------------------
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         14418 40 -     41752 GAGAA-G--------------------------------CCTCCAATG-GCTCCTGA-CT----GCC-AA-A-AGTCA---AAA-C-------------------
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         14255 40 -     16460 GAGAA-G--------------------------------CCTCCAATG-GCTCCTGA-CT----GCC-AA-A-AGTCA---AAA-C-------------------
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243037 40 +    327341 G---A-A-----------------------------AAAATCCCAACA-GCTCCCAA-CT----GCC-AAAA-GGTCC---TAG---------------------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 20
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18516 34 +     36099 ---------------------------------------CCTACAGTG-GCTCCCTA-CT----GAC-CG-T-GGTCA---AAA-C-------------------
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 I 21
s Heterocephalus_glaber.JH602082.1                        20662878 23 +  22651954 G---A-G-----------------------------AAACTTCCAAT-GGCTCCTTA------------------------------------------------
i Heterocephalus_glaber.JH602082.1                       C 0 I 20
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1597 40 +      7595 G---A-T-----------------------------GGGTTGCCAATGG-CTCCCCA-CT----GGC-AA-A-GGTCA---AAA-C-------------------
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 I 21
s Hipposideros_armiger.JXIK01000431.1                       111209 40 +   1711038 G---A-G-----------------------------AAACCTCCAATA-GCTCCCTA-CT----GCT-GA-A-CATCA---AAA-C-------------------
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 2
s Hipposideros_galeritus.HipGal_scaffold_216130               1287 40 -      1713 G---A-G-----------------------------AAACCTCCAATA-GCTTCCTA-CT----GCC-AA-A-CATCA---AAA-C-------------------
i Hipposideros_galeritus.HipGal_scaffold_216130          I 638 n 42
s Hoolock_leuconedys.ctg274                                    435584 62 +    630532 G---A-AAAA-----------------------------CCTCCAATG-GCTCTTTA-CTCCT-GCC-AA-A-CATTA---AAA-CCTATTTAACAGGTCAAATA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45740 39 +     55795 G---A-A-----------------------------AAAATTCCAATG-GCTCCCAA-CT----GCC-AA-A-GGTCA---TAA---------------------
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 20
s Hystrix_cristata.HysCri_scaffold_5660                      83775 23 +    135385 G---A-G-----------------------------AAACCTCCGATG-GCTCCTTA------------------------------------------------
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 20
s Ictidomys_tridecemlineatus.JH393364.1                    7521588 40 -   7955117 G---A-A-----------------------------AAGCTTGCATTG-ACTCCTTA-AC----ACC-AC-A-GGTTA---AAA-C-------------------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 21
s Indri_indri.k141_3655594                                   23216 40 +     31101 gagaa-a--------------------------------cctccaatg-gctccTGA-CT----GCT-AA-A-AATCA---AAC-C-------------------
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               23293 34 +     23964 ---------------------------------------CCTCCAATG-GCTCCCTA-CT----GCC-AA-A-GGTCA---AAA-C-------------------
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 I 2
s Jaculus_jaculus.JH725527.1                               8277605 42 -   9596543 AAA-A-G-----------------------------AATCCTCTAGAG-ACTACTTA-AT----GTA-AA-A-GGTCA---AAA-C-------------------
i Jaculus_jaculus.JH725527.1                             C 0 I 21
s Kogia_breviceps.KogBre_flattened_line_192630                2650 34 -      3359 ---------------------------------------CCTCCAATG-GCTCCCTA-CT----GCC-AA-A-GGTCA---AAA-C-------------------
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 I 2
s Lasiurus_borealis.LasBor_scaffold_50988                    15859 41 +     29960 G---A-A-----------------------------AACCTTTCAATG-GCTCACCT-CT----GCT-GG-A-GATCA---AAACT-------------------
i Lasiurus_borealis.LasBor_scaffold_50988                C 0 I 134
s Lemur_catta.scaffold_24                                 15524770 40 -  30322482 gagaa-g--------------------------------cctccaatg-gctccTGA-CT----GCC-AA-A-AGTTA---AAA-C-------------------
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        8709 62 +     64341 G---G-AAAA-----------------------------CCTCCAGTG-GCTCTTTA-CTACA-GCT-GA-A-AATTA---AAA-CCAACTTAACAGGTCGAAAA
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           1049 62 -     35062 G---G-AAAA-----------------------------CCTCCAGTG-GCTCTTTA-CTACA-GCT-GA-A-AATTA---AAA-CCAACTTAACAGGTCGAAAA
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        8736 62 +     35603 G---G-AAAA-----------------------------CCTCCAGTG-GCTCTTTA-CTACA-GCT-GA-A-AATTA---AAA-CCAACTTAACAGGTCAAAAA
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    30349 62 +     38576 G---G-AAAA-----------------------------CCTCCAGTG-GCTCTTTA-CCACA-GCT-GA-A-AATTA---AAA-CCGATTTAACAGGTCAAAAA
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         27053 62 +     66356 G---G-AAAA-----------------------------CCTCCAGTG-GCTCTTTA-CCACA-GCT-GA-A-AATTA---AAA-CCGATTTAACAGGTCAAAAA
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         11649 39 -     23766 GAAAA-A--------------------------------CCTCCAATG-GCTCCTGA-CT----GCC--A-A-AGTCG---AAA-C-------------------
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29710 39 +     45836 GAAAA-A--------------------------------CCTCCAATG-GCTCCTGA-CT----GCC--A-A-AGTCG---AAA-C-------------------
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          2248 39 +     25010 GAAAA-A--------------------------------CCTCCAATG-GCTCCTGA-CT----GCC--A-A-AGTCA---AAA-C-------------------
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27642 39 +     54090 GAAAA-A--------------------------------CCTCCAATG-GCTCCTGA-CT----GCC--A-A-AGTCG---AAA-C-------------------
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3043759 39 +   3914936 G---A-A-----------------------------AAAATTCCAATG-GCTCCCAA-AT----GTC-AA-A-GGTCA---AGA---------------------
i Leptonychotes_weddellii.KB714746.1                     C 0 I 21
s Lepus_americanus.LepAme_scaffold_107385                     7187 38 -     14121 G---A-G-----------------------------AAACCTCCAATG-GCTCCTTA-CT----ATC-AA-A-GGTCA---G---C-------------------
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 20
s Lipotes_vexillifer.KE559953.1                             268344 34 -    662738 ---------------------------------------CCTCCAATG-GCTCCCTA-CT----GCC-AA-A-GGTCA---AAA-C-------------------
i Lipotes_vexillifer.KE559953.1                          C 0 I 2
s Lophocebus_aterrimus.ctg367                              1437935 62 +   1826925 G---A-GAAA-----------------------------CCGCCGATG-GTTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            6539 40 +     11245 GAAAA-A--------------------------------TCTACAAGG-GCTCCTTA-CT----GCC-AA-A-ACTTG---AAG-A-------------------
i Loris_lydekkerianus.k141_2539221                       I 1 C 0
s Loris_tardigradus.ctg83                                  1005360 40 +   6120653 GAAAA-A--------------------------------TCTACAAGG-GCTCCTTA-CT----GCC-AA-A-ACTTG---AAG-A-------------------
i Loris_tardigradus.ctg83                                I 1 C 0
s Loxodonta_africana.GL010049.1                            4218054 41 -  43346337 G---A-T-----------------------------AAATCTCCAGTGGACTCCCTA-CT----GGC-AA-A-GGTCA---AAA-C-------------------
i Loxodonta_africana.GL010049.1                          C 0 I 20
s Lycaon_pictus.CM007581.1                                17956036 39 -  59628241 G---A-A-----------------------------AAAATTCTAATG-GGCCCCAA-CT----GTC-AA-A-GGTCA---AAA---------------------
i Lycaon_pictus.CM007581.1                               C 0 I 21
s Macaca_arctoides.k141_2326796                               7750 62 +     40492 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CAAAT-GCT-GA-A-GGTTA---AAA-CCTGTTTAACAGGTCAAAAA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59677009 62 +  60120075 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CAAAT-GCT-GA-A-GGTTA---AAA-CCTGTTTAACAGGTCAAAAA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13525 62 -     26193 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CAAAT-GCT-GA-A-GGTTA---AAA-CCTGTTTAACAGGTCAAAAA
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            81309 62 -    114318 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CAAAT-GCT-GA-A-GGTTA---AAA-CCTGTTTAACAGGTCAAAAA
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  6996 62 -     23192 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CAAAT-GCT-GA-A-GGTTA---AAA-CCTGTTTAACAGGTCAAAAA
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16469 62 -     29190 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CAAAT-GCT-GA-A-GGTTA---AAA-CCTGTTTAACAGGTCAAAAA
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  25034 62 +     37952 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CAAAT-GCT-GA-A-GGTTA---AAA-CCTGTTTAACAGGTCAAAAA
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186840123 62 + 187317192 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CAAAT-GCT-GA-A-GGTTA---AAA-CCTGTTTAACAGGTCAAAAA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458686 62 -  25927173 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CAAAT-GCT-GA-A-GGTTA---AAA-CCTGTTTAACAGGTCAAAAA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  80882 62 +     89720 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CAAAT-GCT-GA-A-GGTTA---AAA-CCTGTTTAACAGGTCAAAAA
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 7883 62 +     20474 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CAAAT-GCT-GA-A-GGTTA---AAA-CCTGTTTAACAGGTCAAAAA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   7683 62 -     14993 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CAAAT-GCT-GA-A-GGTTA---AAA-CCTGTTTAACAGGTCAAAAA
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  330549 62 -    668171 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CAAAT-GCT-GA-A-GGTTA---AAA-CCTGTTTAACAGGTCAAAAA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 5996 62 -     24072 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CAAAT-GCT-GA-A-GGTTA---AAA-CCTGTTTAACAGGTCAAAAA
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26621 62 -     45290 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CAAAT-GCT-GA-A-GGTTA---AAA-CCTGTTTAACAGGTCAAAAA
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91323 40 +     94391 g---a-a---aa-a-------------------------cctccaatg-gctcccAA-CT----GCC-AA-A-TGTCA---AAA-C-------------------
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 21
s Mandrillus_leucophaeus.scaffold280                      23938212 62 -  24302211 G---A-GAAA-----------------------------CCTCCGATG-GTTCCTTA-CTACT-GCT-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352334 62 +    752769 G---A-GAAA-----------------------------CCTCCGATG-GTTCCTTA-CTACT-GCC-AA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              18978  5 +    737560 -----------------------------------------------------------------------------a---aaa-t-------------------
i Manis_javanica.JSZB01003497.1                          C 0 I 22
s Manis_pentadactyla.KN006162.1                              50964  5 -    317179 -----------------------------------------------------------------------------a---aaa-t-------------------
i Manis_pentadactyla.KN006162.1                          C 0 I 22
s Marmota_marmota.CZRN01000018.1                          33103785 38 -  40650429 G---A-A-----------------------------AAACTTGCATTG-ACTCCTTA-A------CC-AC-A-GGTTA---AAA-C-------------------
i Marmota_marmota.CZRN01000018.1                         C 0 I 21
s Megaderma_lyra.MegLyr_scaffold_4542                        14062 40 -    207569 G---A-A-----------------------------AAACTTCTAATA-GCTCCCTA-CT----GCC-AA-A-AGTCA---AAA-C-------------------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 17
s Mellivora_capensis.MelCap_flattened_line_69365             10752 39 +     13704 G---A-A-----------------------------AAAATTCCAATG-GCTCCCGA-AT----GTC-AA-A-AGTCA---AAA---------------------
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 21
s Meriones_unguiculatus.MerUng_scaffold_7390                 33433 41 +    140813 AA--A-T-----------------------------AAACCTCCAGTG-TCTCCTTA-CT----GCC-AA-A-GGTCA---AAA-C-------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 22
s Mesocricetus_auratus.KB708134.1                         12182903 45 -  29670104 a--aa-a---aa-aaa-c----------c----------cctccagTG-GCTCCTTA-AT----GCC-AA-A-GGTCA---AAA-C-------------------
i Mesocricetus_auratus.KB708134.1                        C 0 I 14
s Mesoplodon_bidens.MesBid_scaffold_108144                    3961 34 +     10310 ---------------------------------------CCTCCAATG-GCTCCCTA-CT----GCC-AA-A-GGTCA---AAA-C-------------------
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 I 2
s Mico_argentatus.k141_1239457                                6867 62 -      7380 G---G-AAAA-----------------------------CCTCCAGTG-GCTCTTTA-CTACA-GCT-GA-A-AATTA---AAA-CAGATTTAACAGGTCAAAAA
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_schneideri.k141_1950671                                      6840 62 -      7356 G---G-AAAA-----------------------------CCTCCAGTG-GCTCTTTA-CTACA-GCT-GA-A-AATTA---AAA-CAGATTTAACAGGTCAAAAA
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18292197 40 -  93316391 GAGAA-A--------------------------------CCTCCAATA-GCTCCAGA-CT----GCC-AA-A-AGTCA---AAG-C-------------------
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    23155 40 -    145209 A---A-T-----------------------------AAATTCCAATGG-GTTCCTTA-CT----GGCAA--A-GGCCA---AGG-C-------------------
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 12
s Micronycteris_hirsuta.MicHir_scaffold_52381                16346 39 -     19307 G---A-A-----------------------------AAGCATTCGATG--CTCCCTG-CT----GCC-AA-A-GATCA---AAA-T-------------------
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 21
s Microtus_ochrogaster.CM001695.1                         11261151 67 -  27267610 a--aa-a---aacaaaacaaaaataaaacaaaaataaaacctccagTG-GCTCCTTA-CC----ACC-AA-A-GGTCA---AAA-C-------------------
i Microtus_ochrogaster.CM001695.1                        C 0 I 30
s Miniopterus_natalensis.LDJU01000034.1                    1851301 40 +   8254450 G---A-A-----------------------------CAGCTTTCGACA-GCTCCCTA-CT----GCC-GA-A-CAgca---aaa-t-------------------
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 21
s Miniopterus_schreibersii.MinSch_scaffold_18080             34981 40 +     64694 G---A-A-----------------------------CAGCTTTCGACA-GCTCCCTA-CT----GCC-GA-A-CAGCA---AAA-T-------------------
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 21
s Miopithecus_ogouensis.k141_534055                           9918 62 -     28506 G---A-GAAA-----------------------------CCTCCGATG-GTTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6627 39 -      8324 G---A-A-----------------------------AAAATTCCAATG-GCTCCCAA-AT----GTC-AA-A-GGTCA---AAA---------------------
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 21
s Mirza_zaza.k141_952172                                      9741 40 -     37649 GAGAA-A--------------------------------CCTCCAATA-GCTCCTGA-CT----GCC-AA-A-AGTCA---AAG-C-------------------
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    27466 34 -    437263 ---------------------------------------CCTCCAATG-GCTCCCTA-CT----GCC-AG-A-GGTCA---AAA-C-------------------
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 2
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142345 40 -    366855 C---A-A-----------------------------AAGCTTTCAATG-GCTCCCTA-CT----GCG-GA-A-GATCA---AAA-T-------------------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 21
s Moschus_moschiferus.MosMos_scaffold_13123                   1392 34 +     82753 ---------------------------------------CCTACAATG-GCTCCCTA-CT----GAC-CA-T-GGTCA---AAA-C-------------------
i Moschus_moschiferus.MosMos_scaffold_13123              I 13 I 21
s Mungos_mungo.MunMun_flattened_line_23663                   36136 41 +     37127 G---A-A-----------------------------AAAATCCCAATG-GCTCCCAA-CT----GCC-AAAAAGGTCC---TAG---------------------
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 20
s Murina_feae.MurFea_scaffold_85699                           7530 40 +     14753 G---A-A-----------------------------AACCTTTCAATG-GCTCACCT-CT----GCC-AA-A-GATCA---AAA-T-------------------
i Murina_feae.MurFea_scaffold_85699                      C 0 I 19
s Mus_caroli.LT608237.1                                   84362048 41 - 120012414 AA--A-T-----------------------------AAGCCTCAGGTG-GTTCCTTA-CT----GCC-AA-A-GGTCA---AAA-C-------------------
i Mus_caroli.LT608237.1                                  C 0 I 21
s Mus_musculus.chr8                                       87651041 41 - 129401213 AA--A-T-----------------------------AAACCTCAGGTG-GTTCCTTA-CT----GCC-AA-A-GGTCA---AAA-C-------------------
i Mus_musculus.chr8                                      C 0 I 21
s Mus_pahari.LT608297.1                                   31355698 41 -  89631738 AA--A-T-----------------------------AAACCTCAGGTG-GCTCCTTA-GT----GCC-AA-A-GGTCA---AAA-C-------------------
i Mus_pahari.LT608297.1                                  C 0 I 21
s Mus_spretus.CM004101.1                                  90753104 41 - 130317789 AA--A-T-----------------------------AAACCTCAGGTG-ACTCCTTA-CT----GCC-AA-A-GGTCA---AAA-C-------------------
i Mus_spretus.CM004101.1                                 C 0 I 21
s Mustela_putorius.JH418006.1                               302164 39 -  14710649 g---a-a---aa-a-------------------------atttcaatg-GCTCCAGA-AT----GTC-AC-A-GGTCA---AAA---------------------
i Mustela_putorius.JH418006.1                            C 0 I 21
s Myocastor_coypus.MyoCoy_scaffold_10123                     71906 23 -     80779 G---A-G-----------------------------AAACTTCCAAT-GGGTCTCTA------------------------------------------------
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 I 20
s Myotis_brandtii.KE162005.1                                281165 40 -  10118263 G---A-A-----------------------------AACCTTACAATG-GCTCGCCT-CT----GCT-GA-A-Gatca---aaa-t-------------------
i Myotis_brandtii.KE162005.1                             C 0 I 19
s Myotis_davidii.KB100139.1                                1588421 40 -   6019432 G---A-A-----------------------------AACCTTTCAATG-ACTCGCCT-CT----GCC-GA-A-GATCA---ACA-T-------------------
i Myotis_davidii.KB100139.1                              C 0 I 19
s Myotis_lucifugus.GL429869.1                              3904517 41 -   4330536 A---AAA-----------------------------AACCTTACAATG-GCTCGCCT-CT----GCC-AA-A-Gatca---aaa-t-------------------
i Myotis_lucifugus.GL429869.1                            C 0 I 19
s Myotis_myotis.MyoMyo_scaffold_476501                         668 40 +       738 G---A-A-----------------------------AACCTTTCAATG-GCTCGCCT-CT----GCC-GA-A-GATCA---ACA-T-------------------
i Myotis_myotis.MyoMyo_scaffold_476501                   C 0 n 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              189963 17 +    196477 G---A-A-----------------------------AAAT------------CCCTG-CT----GCC--------------------------------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 I 25
s Nannospalax_galili.KL204047.1                            2034750 37 -   3037898 ------T-----------------------------ATACCTCCATCA-GTGCCTCA-CC----ACC-AA-A-GGTCA---A-A-C-------------------
i Nannospalax_galili.KL204047.1                          C 0 I 21
s Nasalis_larvatus.k141_413338                               15920 62 +     21681 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308213 39 +  31847680 G---A-A-----------------------------AAAATTCCAATG-GCTCCCAA-AT----GTC-AA-A-GATCA---AAA---------------------
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 21
s Neophocaena_asiaeorientalis.KZ687982.1                   5866422 34 +   7148211 ---------------------------------------CCTCCAATG-GCTCCCTA-CT----GCC-AA-A-GGTCA---AAA-C-------------------
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 2
s Noctilio_leporinus.NocLep_scaffold_251                    758580 40 +    783361 G---A-A-----------------------------AAGCTTTTCATG-GCTTCCTA-CT----GCT-GA-A-GATCC---AAA-T-------------------
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 21
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150099 39 -   9404916 G---A-A-----------------------------AAAATTCTAATG-GTCCCCAA-CT----GTC-AA-A-GGTCA---AAA---------------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 21
s Nycticebus_bengalensis.LG01                            102586904 40 - 196305487 AAAAA-A--------------------------------CCTACAAGG-GCTCCTTA-CT----GCC-AA-A-AGTTG---AAG-A-------------------
i Nycticebus_bengalensis.LG01                            I 1 C 0
s Nycticebus_coucang.k141_1127096                              828 40 +      2075 AAAAA-A--------------------------------CCTACAAGG-GCTCCTTA-CT----GCC-AA-A-AGTTG---AAG-A-------------------
i Nycticebus_coucang.k141_1127096                        I 1 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105762259 40 + 199412804 AAAAA-A--------------------------------CCTACAAGG-GCTCCTTA-CT----GCC-AA-A-AGTTG---AAG-A-------------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 1 C 0
s Ochotona_princeps.JH802162.1                             1364564 38 +   3988456 G---C-A-----------------------------AAAGCTCCAATG-ATTCCTTG-CT----GCC-AA-T-GGTCA---A---C-------------------
i Ochotona_princeps.JH802162.1                           C 0 I 17
s Octodon_degus.JH651603.1                                  747643  7 +  11899542 g---a-g-----ca------------------------gc-----------------------------------------------------------------
i Octodon_degus.JH651603.1                               C 0 I 1546
s Odobenus_rosmarus.KB229312.1                              507355 39 -   2017862 G---A-A-----------------------------AAAATTCCAGTG-GCTCCCAA-AT----GTC-AA-A-GGTCA---AAA---------------------
i Odobenus_rosmarus.KB229312.1                           C 0 I 21
s Okapia_johnstoni.LVCL01S0005463.1                          77229 34 -    150152 ---------------------------------------CCTACAATG-GCTCCCTA-CT----GAC-CA-A-GGTCA---AAA-C-------------------
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 21
s Ondatra_zibethicus.OndZib_scaffold_46174                   25829 49 +     28053 A--CA-A-------------------CAACAAAAAAAACCCTCCTGTG-GCTCCTTA-CC----ACC-AA-A-GGTCA---AA----------------------
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 23
s Onychomys_torridus.OnyTor_scaffold_2986                    80874 45 +    102263 CA--A-A-------------------------AAAAAACCCTCCAGTG-GCTCCTTA-CT----GCC-AA-A-GGTCA---AAA-C-------------------
i Onychomys_torridus.OnyTor_scaffold_2986                I 43 I 21
s Orcinus_orca.KB316932.1                                  2782345 34 -  10937097 ---------------------------------------CCTCCAATG-GTTCCCTA-CT----GCC-AA-A-GGTCA---AAA-C-------------------
i Orcinus_orca.KB316932.1                                C 0 I 2
s Orycteropus_afer.OryAfe_flattened_line_144387              10814 41 -     18566 G---A-T-----------------------------AAGTCCACAAAG-GCTCCCTA-CA----AGCAAA-A-AGTCA---AAA-C-------------------
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 I 21
s Oryctolagus_cuniculus.CM000791.1                        67148047 38 + 174332312 G---A-G-----------------------------AAACCTCCAATG-GCTCCTTA-CT----GTC-AA-A-GGTCA---A---C-------------------
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 20
s Otocyon_megalotis.JAEUCK010005147.1                       463048 39 -    559221 G---A-A-----------------------------AAAATTCTAATG-GTCCCCAA-CT----GTC-AA-A-GGTCA---AAA---------------------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 21
s Otolemur_crassicaudatus.k141_222918                         4811 40 +      8798 GAAAA-G--------------------------------CCTACAAGG-GCTCCTTA-CT----GCC-AA-A-AGTTG---AAG-A-------------------
i Otolemur_crassicaudatus.k141_222918                    I 1 C 0
s Otolemur_garnettii.GL873799.1                             696974 40 -   1103335 GAAAA-G--------------------------------CCTACAAGG-GCTCCTTA-CT----GCC-AA-A-AGTTG---AAG-A-------------------
i Otolemur_garnettii.GL873799.1                          I 1 C 0
s Ovis_aries.CM001607.2                                   17586491 34 +  44047080 ---------------------------------------CCTATAGTG-GCTCCCTA-CT----GAC-CG-T-GGTCA---AAA-C-------------------
i Ovis_aries.CM001607.2                                  C 0 I 21
s Ovis_canadensis.OviCan_scaffold_2572                      174468 34 -    191736 ---------------------------------------CCTACAGTG-GCTCCCTA-CT----GAC-CG-T-GGTCA---AAA-C-------------------
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 I 21
s Pan_paniscus.KQ411613.1                                    44871 62 +     80009 G---A-AAAA-----------------------------CCTCCAATG-GCTCTTTA-CTCCT-GCC-AA-A-GGTTA---AAA-CCTATTTAACAGGTCAAAAA
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189143770 62 + 189151597 G---A-AAAA-----------------------------CCTCCAATG-GCTCTTTA-CTCCT-GCC-AA-A-GGTTA---AAA-CCTATTTAACAGGTCAAAAA
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  151858 40 +    230217 G---A-A----------------------------AAAAATTCCAATG-GCTCCCAA-CT----GCC-AA-A-GATTA---TAA---------------------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 20
s Panthera_pardus.KV860321.1                                265067 40 +  18783137 g---a-a---aa-aa------------------------attccaatg-gcTCCCAA-CT----GCC-AA-A-GATTA---TAA---------------------
i Panthera_pardus.KV860321.1                             C 0 I 20
s Panthera_tigris.KE722367.1                               4721946 41 -   8748460 g---a-a---aa-aaa-----------------------attccaatg-gcTCCCAA-CT----GCC-AA-A-GATTA---TAA---------------------
i Panthera_tigris.KE722367.1                             C 0 I 20
s Pantholops_hodgsonii.KE114653.1                          1265385 34 -   2937107 ---------------------------------------CCTACAGTG-GCTCCCTA-CT----GAC-CA-T-GGTCA---AAA-C-------------------
i Pantholops_hodgsonii.KE114653.1                        C 0 I 21
s Papio_anubis.CM001495.2                                183444012 62 + 183742232 A---A-GAAA-----------------------------CCGCCGATG-GTTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTCAACAGGTCAAAAA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7658 62 +     20448 G---A-GAAA-----------------------------CCGCCGATG-GTTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTCAACAGGTCAAAAA
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20564470 62 +  20919399 G---A-GAAA-----------------------------CCGCCGATG-GTTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTCAACAGGTCAAAAA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6402 62 +     41871 G---A-GAAA-----------------------------CCGCCGATG-GTTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     9695 62 +     27711 G---A-GAAA-----------------------------CCGCCGATG-GTTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTCAACAGGTCAAAAA
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                   692 62 -     11374 G---A-GAAA-----------------------------CCGCCGATG-GTTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTCAACAGGTCAAAAA
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13360 39 -     78924 G---A-A-----------------------------AGAATTCCAATG-GCTCCCAA-CT----GCC-AA-A-GGTCA---TAA---------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 20
s Perodicticus_ibeanus.k141_855320                           10798 40 +     13100 GAAAA-A--------------------------------CCTACAAGG-GCTCCTTA-CT----GCC-AA-A-AGTTG---AAG-A-------------------
i Perodicticus_ibeanus.k141_855320                       I 1 C 0
s Perodicticus_potto.k141_1092580                             9192 40 +     25941 GAAAA-A--------------------------------CCTACAAGG-GCTCCTTA-CT----GCC-AA-A-AGTTG---AAG-A-------------------
i Perodicticus_potto.k141_1092580                        I 1 C 0
s Peromyscus_maniculatus.KI615324.1                       18195454 45 -  18517816 c--aa-a---aa-aaaac---------------------cctccagtg-GCTCCTTA-CT----GCC-AA-A-GATCA---AAA-C-------------------
i Peromyscus_maniculatus.KI615324.1                      C 0 I 21
s Petromus_typicus.PetTyp_scaffold_42190                     28787 23 -     29689 G---A-G-----------------------------AAATTTCCAAT-GGCTCCGTA------------------------------------------------
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 I 21
s Phocoena_phocoena.PhoPho_flattened_line_24159               9384 34 +     63832 ---------------------------------------CCTCCAATG-GCTCCCTA-CT----GCC-AA-A-GGTCA---AAA-C-------------------
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 2
s Piliocolobus_badius.k141_1234363                           44411 62 +     62158 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTC-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        39158 62 +     89929 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTC-CTACT-GCC-GA-A-GATTA---AAA-CCTGTGTAACAGGTCAAAAA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40574 62 +     51399 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTC-CTACT-GCC-GA-A-GATTA---AAA-CCTGTGTAACAGGTCAAAAA
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296812 62 -  14605196 G---A-GAAA-----------------------------CCTCCAATG-GCTCCTTC-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGtcaaaaa
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 1
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2463 40 +     22620 G---A-A-----------------------------ATCCTTTCAATG-GCTCACCT-CT----GCC-AA-A-GACCA---AAT-T-------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 16
s Platanista_gangetica.PlaMin_flattened_line_32310           35090 34 +     35617 ---------------------------------------CCTCCAATG-GCTCCCTA-CT----GCC-AA-A-GGTCA---AAA-C-------------------
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 I 2
s Pongo_abelii.CM009266.2                                189156524 63 + 189387572 G---A-AAAA-----------------------------CCTCCAATG-GCTCTTTAACTCCT-GAC-AA-A-ACTTA---AAA-CCTATTTAACAGGTCAAAAA
i Pongo_abelii.CM009266.2                                I 24609 T 24610
s Pongo_pygmaeus.ctg66                                     9571522 62 +   9816681 G---A-AAAA-----------------------------CCTCCAATG-GCTCTTTA-CTCCT-GAC-AA-A-CATTA---AAA-CCTATTTAACAGGTCAAAAA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               74095 62 -     81375 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              5916 62 +     19060 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 14052 40 -     22811 G---A-T-----------------------------GGGTTGCCAATGG-CTCCCCA-CT----GGC-AA-A-GGTCA---AAA-C-------------------
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 I 21
s Prolemur_simus.MPIZ01000396.1                            2597450 40 -   4620579 GAGAA-G--------------------------------CCTCCAATG-GCTCCTGA-CT----GCC-AA-A-AGGCA---AAA-C-------------------
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     991437 40 +   2598838 GAGAA-A--------------------------------CCTCCAGTG-GCTCCTAA-CT----GCC-AA-A-AGTCA---AAA-C-------------------
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29749 40 +     38485 GAGAA-A--------------------------------CCTCCAGTG-GCTCCTGA-CT----GCC-AA-A-AGTCA---AAA-C-------------------
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1791 40 -     13098 GAGAA-A--------------------------------CCTCCAGTG-GCTCCTGA-CT----GCC-AA-A-AGTCA---AAA-C-------------------
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          27270 40 +     35766 GAGAA-A--------------------------------CCTCCAGTG-GCTCCTGA-CT----GCC-AA-A-AGTCA---AAA-C-------------------
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           5457 40 -     24134 GAGAA-A--------------------------------CCTCCAGTG-GCTCCTGA-CT----GCC-AA-A-AGTCA---AAA-C-------------------
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        29282 40 -     67325 GAGAA-A--------------------------------CCTCCAGTG-GCTCCTGA-CT----GCC-AA-A-AGTCA---AAA-C-------------------
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           5505 40 -      6182 GAGAA-A--------------------------------CCTCCAGTG-GCTCCTGA-CT----GCC-AA-A-AGTCA---AAA-C-------------------
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            11079 41 -     21651 AA--A-T-----------------------------AAACCTCCAGTG-TCTCCTTA-CT----GTC-AA-A-GGTCA---AAA-C-------------------
i Psammomys_obesus.NESX01036370.1                        C 0 I 22
s Pteronotus_parnellii.KE909381.1                            15854 40 -     21811 G---T-C-----------------------------AAGCTTTCAATG-GCTCTCTA-CC----GCC-Aa-a-gatca---aaa-t-------------------
i Pteronotus_parnellii.KE909381.1                        C 0 I 21
s Pteronura_brasiliensis.PteBra_flattened_line_31117         40946 40 +     42204 G---A-A----------------------------AAAAATTTCAATG-GCTCCAAA-AT----GTC-AA-A-GGTCA---AAA---------------------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 21
s Pteropus_alecto.KB030862.1                              22977469 40 +  28871421 g---a-a---aa-a-------------------------cttccaata-gctcccAA-CT----GCC-AA-A-TGTCA---AAA-C-------------------
i Pteropus_alecto.KB030862.1                             C 0 I 21
s Pteropus_vampyrus.KN534172.1                                7522 40 -      8028 G---A-A-----------------------------AAACTTCCAATA-GCTCCTAA-CT----GCC-AA-A-TGTCA---AAA-C-------------------
i Pteropus_vampyrus.KN534172.1                           C 0 I 21
s Puma_concolor.QAVW01001104.1                            20275019 40 -  38429054 g---a-a---aa-aa------------------------attccaatg-gcTCCCAA-CT----GCC-AA-A-GATTA---TAA---------------------
i Puma_concolor.QAVW01001104.1                           C 0 I 20
s Pygathrix_cinerea.k141_1153803                             15902 62 -     91421 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CGACT-GCC-GA-A-GACTA---AAA-CCTGTTTAACAGGTCAAAAA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7610022 62 +   7812017 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CGACT-GCC-GA-A-GACTA---AAA-CCTGTTTAACAGGTCAAAAA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             15901 62 -     72585 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CGACT-GCC-GA-A-GACTA---AAA-CCTGTTTAACAGGTCAAAAA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5968 34 +     55207 ---------------------------------------CCTACAATG-GCTCCCTA-CT----GAC-CA-T-GCTCA---AAA-C-------------------
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 21
s Rattus_norvegicus.chr16                                 53571296 41 +  90668790 AA--A-T-----------------------------AAACCTCAGGTG-GCTCCTTA-CT----GCC-AA-A-GGTCA---AAA-C-------------------
i Rattus_norvegicus.chr16                                C 0 I 21
s Rhinolophus_sinicus.LVEH01000134.1                        367697 40 -   3329780 G---A-G-----------------------------AAACCTCCAATA-GCTCCCTA-AT----TCC-AA-A-CATCA---AAA-C-------------------
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 2
s Rhinopithecus_bieti.k119_217274                             7612 62 -     11128 G---A-GAAA-----------------------------CCTCCGATG-GCGCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91236961 62 - 195417433 G---A-GAAA-----------------------------CCTCCGATG-GCGCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672617 62 +   7961872 G---A-GAAA-----------------------------CCTCCGATG-GCGCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88510 40 -     96226 G---A-A-----------------------------AAACCTTTAATA-GCTCCCAA-CT----GCC-AA-A-TGCCC---AAA-C-------------------
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 20
s Saguinus_bicolor.k141_8081                                  2025 62 +     42994 G---G-AAAA-----------------------------CCTCCAGTG-GCTCTTTA-CTACA-GCT-GA-A-AATTA---AAA-CCGACTTAACAGGTTGAAAA
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                              718 62 +      2253 G---G-AAAA-----------------------------CCTCCAGTG-GCTCTTTA-CTACA-GCT-GA-A-AATTA---AAA-CAGACTTAACAGGTCGAAAA
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               1147 62 -      8737 G---G-AAAA-----------------------------CCTCCAGTG-GCTCTTTA-CTACA-GCT-GA-A-AATTA---AAA-CAGACTTAACAGGTCGAAAA
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                               800 62 +      2343 G---G-AAAA-----------------------------CCTCCAGTG-GCTCTTTA-CTACA-GCT-GA-A-AATTA---AAA-CAGACTTAACAGGTCGAAAA
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209475679 62 + 209938924 G---G-AAAA-----------------------------CCTCCAGTG-GCTCTTTA-CTACA-GCT-GA-A-AATTA---AAA-CCGACTTTACAGGTTGAAAA
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                 123 62 -      7576 G---G-AAAA-----------------------------CCTCCAGTG-GCTCTTTA-CTACA-GCT-GA-A-AATTA---AAA-CAGACTTAACAGGTCGAAAA
i Saguinus_mystax.k141_4699220                           N 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951748 61 - 121099817 G---A-AAAA-----------------------------CCTCCAGTG-GCTCTTTA-CTACT-GCC-AA-A-GATTA---AAA-CCGATTTAACAGGT-AAAAA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24090 61 +     46362 G---A-AAAA-----------------------------CCTCCAGTG-GCTCTTTA-CTACT-GCC-AA-A-GATTA---AAA-CCGATTTAACAGGT-AAAAA
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               24185 61 +     45824 G---A-AAAA-----------------------------CCTCCAGTG-GCTCTTTA-CTACT-GCC-AA-A-GATTA---AAA-CCAATTTAACAGGT-AAAAA
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             40864 61 -     64574 G---A-AAAA-----------------------------CCTCCAGTG-GCTCTTTA-CTACT-GCC-AA-A-GATTA---AAA-CCGATTTAACAGGT-AAAAA
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               3937 61 -     23631 G---A-AAAA-----------------------------CCTCCAGTG-GCTCTTTA-CTACT-GCC-AA-A-GATTA---AAA-CCGATTTAACAGGT-AAAAA
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 24081 61 -     61129 G---A-AAAA-----------------------------CCTCCAGTG-GCTCTTTA-CTACT-GCC-AA-A-GATTA---AAA-CCGATTTAACAGGT-AAAAA
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5421430 61 -   5703754 G---A-AAAA-----------------------------CCTCCA-TG-ACTCTTTA-CTACT-GCC-AA-A-GATTA---AAA-CCGATTTAACAGGTCAAAAA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          56671 61 -     80660 G---A-AAAA-----------------------------CCTCCA-TG-ACTCTTTA-CTACT-GCC-AA-A-GATTA---AAA-CCGATTTAACAGGTCAAAAA
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153891 40 -    313613 G---A-A-----------------------------AAACCTCCAATG-ACGCCCTA-CT----GTC-AA-A-GGTCA---AAA-T-------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 21
s Semnopithecus_entellus.k141_1672505                          793 62 -     12572 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27643 62 +     39453 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            8161 62 +     27826 G---A-GAAA-----------------------------CCTCTGATG-GCTCCTTA-CTACT-GCT-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             7683 62 -     19483 C---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                       984 62 -     12762 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                            845 62 +     13763 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                      983 47 -     30804 AA--A-A-----------------------AAAAATAAACCTCCAGTG-GCTCCTTA-AT----GGT-AA-A-GGTCA---AAA-T-------------------
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 I 21
s Solenodon_paradoxus.SolPar_flattened_line_126               4452 40 +   1910179 G---A-A-----------------------------AAACCTCCAATG-ATGCCCTA-CT----GCC-AA-A-GGTCA---AAA-T-------------------
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 21
s Sorex_araneus.JH798187.1                                13651701 19 -  18376816 ----A-A-----------------------------AAATTGCAGATA-ACTCC---------------------------------------------------
i Sorex_araneus.JH798187.1                               I 1 I 33
s Spermophilus_dauricus.KZ294078.1                         1954641 40 -   3870691 G---A-A-----------------------------AAACTTGCATTG-ACTCCTTA-AC----ACC-AC-A-GGTTA---AAA-C-------------------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 21
s Spilogale_gracilis.SpiGra_flattened_line_13525             31430 46 +     97271 A---A-A----------------------AAAAAAAAAAATTTCAATG-GTTCCCAA-AT----GTG-AA-A-GGTCA---AAA---------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 21
s Suricata_suricatta.SurSur_flattened_line_6629              19039 40 -    196729 G---A-A-----------------------------AAAATCCCAGGG-GCTCCCAA-CT----GCC-AAAA-AGTCC---TAG---------------------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 20
s Sus_scrofa.CM000828.4                                    6811511 37 +  69701581 G---A-A------------------------------AAACCCTTCTG-GCT--CTA-CT----GCC-AA-A-GGCCA---AAA-C-------------------
i Sus_scrofa.CM000828.4                                  C 0 I 487
s Tadarida_brasiliensis.TadBra_scaffold_25820                11507 40 +     41958 G---A-A-----------------------------AAGCTTTCAATG-GCTCCCTA-CT----GCC-AA-A-GGTCA---AAA-T-------------------
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 21
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73322 17 +    116680 G---A-A-----------------------------AAAT------------CCCTA-CT----GCC--------------------------------------
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 I 25
s Tapirus_indicus.TapInd_scaffold_9301                      119484 40 -    156842 g---a-a---a-ca-------------------------cctccaatg-gctcccta-tT----GCC-AA-A-GGTCA---ACA-C-------------------
i Tapirus_indicus.TapInd_scaffold_9301                   I 3 I 16
s Tapirus_terrestris.TapTer_scaffold_755                    387940 40 +    539355 g---a-a---a-ca-------------------------cctccaatg-gctcccta-tT----GCC-AA-A-GGTCA---ACA-C-------------------
i Tapirus_terrestris.TapTer_scaffold_755                 I 3 I 21
s Theropithecus_gelada.CM009954.1                        186429330 62 + 186847797 G---A-GAAA-----------------------------CCGCCGATG-GTTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106092 23 +    114563 G---A-G-----------------------------AAACTTCCAAA-GGCTCCTGA------------------------------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 20
s Tolypeutes_matacus.TolMat_scaffold_228639                   7084 28 +      8208 G---A-A-----------------------------AAATCTCCAATG-CTTCCCTA-CT----GCC--------------------------------------
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 I 26
s Tonatia_saurophila.TonSau_scaffold_294                     81901 40 +    610378 G---A-A-----------------------------AAGCTTTCGATG-GCTCCCTA-CT----GGT-GA-A-GAGCA---AAA-C-------------------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 21
s Trachypithecus_auratus.k141_722599                         11734 62 -     20410 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                       848 62 -     12674 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       11835 62 +     19930 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       8246 62 -     19997 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48385 62 -     60166 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        15857 62 -     27529 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     15801 62 -     18194 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9513 62 -     21137 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    8216 62 -     10723 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7388 62 +      9834 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        25701 62 +     32220 G---A-GAAA-----------------------------CCTCCGATG-GCTGCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5939803 62 +   6242583 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        9054 62 +     20839 G---A-GAAA-----------------------------CCTCCGATG-GCTCCTTA-CTACT-GCC-GA-A-GATTA---AAA-CCTGTTTAACAGGTCAAAAA
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                   1641 34 -      1748 ---------------------------------------ACTCCAACA-TCTTCCTG-CT----GCC-AA-A-GGTCA---AAA-C-------------------
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 I 20
s Trichechus_manatus.JH594705.1                            4293953 42 +  10818551 G---A-G-----------------------------AAACATCCAACGGGCTCTCTA-CT----GGC-AAAA-GGTCA---AAA-C-------------------
i Trichechus_manatus.JH594705.1                          C 0 I 25
s Tupaia_chinensis.KB320699.1                              2156511 34 +   4065304 ---------------------------------------CCTGCAATG-GCTCCTTA-CT----GTC-AA-A-AGTCA---AAA-C-------------------
i Tupaia_chinensis.KB320699.1                            I 3 I 18
s Tupaia_tana.TupTan_flattened_line_97126                     9954 34 -     10553 ---------------------------------------CCTTCAATG-GCTCCTTA-CT----GTC-AA-A-AGTCA---AAA-C-------------------
i Tupaia_tana.TupTan_flattened_line_97126                I 3 I 18
s Tursiops_truncatus.MRVK01000835.1                       15738584 34 +  33153633 ---------------------------------------CCTCCAATG-GCTCCCTA-CT----GCC-AA-A-GGTCA---AAA-C-------------------
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 2
s Uropsilus_gracilis.UroGra_scaffold_12083                   54002 39 -     77625 ----A-A-----------------------------AAACCTCCAATG-GCTTCCTA-TT----GAC-AG-A-GATCA---AAA-C-------------------
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 21
s Ursus_maritimus.KK499267.1                               4851148 39 -   5085361 G---A-A-----------------------------AAAATTCCAATG-GCTCCCAA-AT----GTC-AA-A-GGTCA---AAA---------------------
i Ursus_maritimus.KK499267.1                             C 0 I 21
s Varecia_rubra.k141_590885                                  12115 40 +     50397 GAGAA-G--------------------------------CCTCCAATG-GCTCCTGA-CT----GCC-AA-A-AGTCA---AAA-C-------------------
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             12174 40 +     24756 GAGAA-G--------------------------------CCTCCAATG-GCTCCTGA-CT----GGC-AA-A-AGTCA---AAA-C-------------------
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5372474 40 -   5488506 G---A-A-----------------------------ACAGCTCCAATG-GCTGCCTA-CT----GCC-AA-A-GGTCA---AAA-C-------------------
i Vicugna_pacos.KN270157.1                               C 0 I 14
s Vulpes_lagopus.VulLag_flattened_line_30954                 11499 39 -     43706 G---A-A-----------------------------AGAATTCTAATG-GTCCCCAA-CT----GTC-AA-A-GGTCA---AAA---------------------
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 21
s Xerus_inauris.XerIna_scaffold_2302                          1772 40 +    224448 a---a-a---aa-a-------------------------CTTGCCATG-ACTTCTTA-AC----ACC-AA-A-GGTCA---AAA-C-------------------
i Xerus_inauris.XerIna_scaffold_2302                     I 8 I 24
s Zapus_hudsonius.ZapHud_scaffold_11398                      15574 42 +     63895 AAA-A-G-----------------------------AAACTTCCAGTG-ACTACTCA-CT----GCC-AA-C-GGTCA---AAA-C-------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 21
s Ziphius_cavirostris.ZipCav_flattened_line_71469            12276 34 +     12536 ---------------------------------------CCTCCAATG-GCTCCCTA-CT----GCC-AA-A-GGTCA---AAA-C-------------------
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 I 2
e Chiropotes_albinasus.k141_2206961                           1651 303 -     15524 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Tarsius_wallacei.k141_254427                                1877  3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080  3 +     70052 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Glis_glis.GliGli_scaffold_19807                            32063  0 +     49224 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cephalopachus_bancanus.k141_1423433                         6085  3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Carlito_syrichta.NW_007259797.1                           156587  3 -    496798 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       7590 2 +     62944 TT
s Acinonyx_jubatus.LLWD01001279.1                           828072 1 -   1699592 -A
i Acinonyx_jubatus.LLWD01001279.1                        I 20 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     71547 1 +     87051 -G
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 21 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511348 1 -  29979442 -A
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 21 C 0
s Ailurus_fulgens.LNAC01001112.1                             80082 1 -    347723 -A
i Ailurus_fulgens.LNAC01001112.1                         I 21 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     75254 1 -     89534 -A
i Allactaga_bullata.AllBul_scaffold_9566                 I 21 C 0
s Allenopithecus_nigroviridis.k141_3361533                   15519 2 -     52922 CT
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15439 2 -     28001 TT
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          5937 2 -     18505 TT
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           6789 2 -     12518 TT
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              8365 2 +     51355 AT
i Alouatta_belzebul.k141_3560514                         C 0 I 4
s Alouatta_caraya.k141_1701091                                1474 2 -     36483 AT
i Alouatta_caraya.k141_1701091                           C 0 I 4
s Alouatta_discolor.k141_566626                              11926 2 +     28687 AT
i Alouatta_discolor.k141_566626                          C 0 I 4
s Alouatta_juara.k141_1302312                                  439 2 +     27940 AT
i Alouatta_juara.k141_1302312                            C 0 I 4
s Alouatta_macconnelli.k141_918386                            1483 2 -      9457 AT
i Alouatta_macconnelli.k141_918386                       C 0 I 4
s Alouatta_nigerrima.k141_1929159                              439 2 +     30492 AT
i Alouatta_nigerrima.k141_1929159                        C 0 I 4
s Alouatta_palliata.k141_2135620                              4434 2 +     47717 AT
i Alouatta_palliata.k141_2135620                         C 0 I 4
s Alouatta_puruensis.k141_362188                              1166 2 +      5663 AT
i Alouatta_puruensis.k141_362188                         C 0 I 4
s Alouatta_seniculus.k141_117119                             15618 2 +     50774 AT
i Alouatta_seniculus.k141_117119                         C 0 I 4
s Ammotragus_lervia.NIVO01071767.1                          676247 1 -   2318259 -A
i Ammotragus_lervia.NIVO01071767.1                       I 21 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      186112 1 +    412891 -A
i Anoura_caudifer.AnoCau_scaffold_1412                   I 21 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             98730 1 -    100397 -A
i Antilocapra_americana.AntAmePen_scaffold_12469         I 21 C 0
s Aotus_azarae.k141_3104676                                  16611 2 -     33861 TT
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            16608 2 -     34016 TT
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299035 2 -   5030052 tt
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             16644 2 -     34685 TT
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               29769 2 -     47192 TT
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13369 1 +     20879 -A
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 21 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5502 1 +     43469 -A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 21 C 0
s Avahi_laniger.k141_765380                                  54433 1 -     92717 -A
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              55064 1 +     85213 -A
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15192476 1 +  23207421 -A
i Balaenoptera_acutorostrata.KI537508.1                  I 2 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2941 1 -     18090 -A
i Balaenoptera_bonaerensis.DF707048.1                    I 2 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    27170 1 +     34529 -A
i Beatragus_hunteri.BeaHun_scaffold_50177                I 21 C 0
s Bison_bison.KN261452.1                                    200226 1 -    288883 -A
i Bison_bison.KN261452.1                                 I 21 C 0
s Bos_indicus.CM003047.1                                  20273431 1 +  48749331 -A
i Bos_indicus.CM003047.1                                 I 21 C 0
s Bos_mutus.JH880303.1                                     1125987 1 -   1948126 -A
i Bos_mutus.JH880303.1                                   I 21 C 0
s Bos_taurus.CM000203.6                                   18084069 1 +  45695690 -A
i Bos_taurus.CM000203.6                                  I 21 C 0
s Bubalus_bubalis.KI419123.1                               2819737 1 +   4408762 -A
i Bubalus_bubalis.KI419123.1                             I 21 C 0
s Callibella_humilis.k141_1278103                             6493 2 -     10423 TT
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callithrix_geoffroyi.k119_69176                              332 2 +      5377 TT
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592193 2 - 189096842 TT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1007 2 -     12329 TT
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002995 1 -  17673402 -A
i Camelus_bactrianus.KN276810.1                          I 14 C 0
s Camelus_dromedarius.KN272107.1                           2335471 1 -   7040546 -A
i Camelus_dromedarius.KN272107.1                         I 14 C 0
s Camelus_ferus.KB017975.1                                  403768 1 -   1652518 -A
i Camelus_ferus.KB017975.1                               I 14 C 0
s CanFam4.chr16                                           17799937 1 -  60362399 -A
i CanFam4.chr16                                          I 21 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                      685 1 -     43241 -A
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 21 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9035380 1 -   9314153 -A
i Canis_lupus_dingo.QKWQ01000480.1                       I 21 C 0
s Canis_lupus_familiaris.chr16                            17959856 1 -  59632846 -A
i Canis_lupus_familiaris.chr16                           I 21 C 0
s Canis_lupus_orion.HG994398.1                            18501153 1 +  63665305 -A
i Canis_lupus_orion.HG994398.1                           I 21 C 0
s Capra_aegagrus.CM003241.1                               18830365 1 +  46296322 -A
i Capra_aegagrus.CM003241.1                              I 21 C 0
s Capra_hircus.CM004588.1                                 18061085 1 -  44709034 -A
i Capra_hircus.CM004588.1                                I 21 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1761 1 -     12242 -A
i Capromys_pilorides.CapPil_scaffold_65020               I 20 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5869 1 -     11696 -A
i Carollia_perspicillata.CarPer_scaffold_92756           I 21 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137866 1 +    179628 -A
i Castor_canadensis.CasCan_scaffold_2074                 I 21 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     94292 1 +    217609 -A
i Catagonus_wagneri.CatWag_scaffold_2839                 I 490 C 0
s Cebuella_niveiventris.k141_1251222                         10933 2 -     11392 TT
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               7117 2 -      7577 TT
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25653537 2 +  26074798 TT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                1475 2 +     28840 TT
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 1200 2 +     14051 TT
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Ceratotherium_simum.JH767749.1                          12232219 1 +  27778364 -a
i Ceratotherium_simum.JH767749.1                         I 21 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3246 1 -     25243 -A
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 21 C 0
s Cercocebus_atys.KQ010504.1                               4476454 2 +   4669795 TT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                         956 2 +     17872 TT
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           1613 2 -     14043 TT
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9646 2 +     27781 TT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         9814 2 -     20310 TT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          12794 2 +     29689 TT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7540 2 -     20078 CT
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          15462 2 -     27936 TT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            4328 2 -     17152 TT
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38817873 2 +  39242232 TT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223562 2 -  21565898 CT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40681 2 -     53127 TT
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                         932 2 +     13442 TT
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15481 2 -     27947 TT
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         15457 2 +     17596 TT
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          1500 2 +     14005 CT
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1248 1 -      8501 -A
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       I 26 C 0
s Cheirogaleus_major.k141_333249                             21811 1 -     52598 -A
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           17182 1 +     57038 -A
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1253635 1 +   2543920 -a
i Chinchilla_lanigera.JH722012.1                         I 20 C 0
s Chlorocebus_aethiops.ctg25                              18429441 2 -  18827391 TT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15877 2 -     50209 TT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422878 2 + 135778131 TT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 19063 1 +     19366 -A
i Choloepus_didactylus.ChoDid_scaffold_45914             I 26 C 0
s Choloepus_hoffmanni.KN194906.1                            174138 1 +    839153 -A
i Choloepus_hoffmanni.KN194906.1                         I 26 C 0
s Colobus_angolensis.KN981557.1                            1911354 2 +   2368649 TT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949606 2 + 200372422 TT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37888 2 +     84244 TT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17548808 1 -  53390261 -A
i Condylura_cristata.JH655891.1                          I 21 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 50787 1 +     63868 -G
i Cricetomys_gambianus.CriGam_scaffold_18520             I 21 C 0
s Cricetulus_griseus.LT883664.1                           11668300 1 + 224834208 -G
i Cricetulus_griseus.LT883664.1                          I 14 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               3713 1 -     19598 -A
i Crocidura_indochinensis.CroInd_scaffold_37019          I 33 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29259 1 -     87169 -A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 20 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  36629 1 +     51376 -A
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 19 C 0
s Dasypus_novemcinctus.JH564415.1                            64266 1 +   2246927 -A
i Dasypus_novemcinctus.JH564415.1                        I 26 C 0
s Daubentonia_madagascariensis.ctg71                      12538014 1 -  12879189 -A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16812112 1 +  35494412 -A
i Delphinapterus_leucas.KZ290073.1                       I 2 C 0
s Desmodus_rotundus.KZ672289.1                             8630865 1 +  20541912 -A
i Desmodus_rotundus.KZ672289.1                           I 3 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  674068 1 +   1390856 -a
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 21 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6819 1 +    198055 -a
i Diceros_bicornis.DicBicMic_scaffold_5955               I 21 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37113 1 +     67921 -A
i Dinomys_branickii.DinBra_scaffold_21862                I 20 C 0
s Echinops_telfairi.JH980293.1                            48781327 1 + 111700974 -G
i Echinops_telfairi.JH980293.1                           I 12 C 0
s Eidolon_helvum.KE759718.1                                  11290 1 +     11740 -A
i Eidolon_helvum.KE759718.1                              I 21 I 2
s Elaphurus_davidianus.JRFZ01104969.1                       311402 1 +    607251 -A
i Elaphurus_davidianus.JRFZ01104969.1                    I 21 C 0
s Elephantulus_edwardii.JH947257.1                         1098488 1 +  10337057 -A
i Elephantulus_edwardii.JH947257.1                       I 26 C 0
s Ellobius_lutescens.LOEQ01008920.1                          21269 1 -    110024 -G
i Ellobius_lutescens.LOEQ01008920.1                      I 30 C 0
s Ellobius_talpinus.LOJH01081419.1                            1175 1 +      8657 -G
i Ellobius_talpinus.LOJH01081419.1                       I 30 C 0
s Enhydra_lutris.KZ291758.1                               16330072 1 -  41312741 -A
i Enhydra_lutris.KZ291758.1                              I 21 C 0
s Eptesicus_fuscus.JH977646.1                              2146481 1 -  14770903 -A
i Eptesicus_fuscus.JH977646.1                            I 19 C 0
s Equus_asinus.JREZ01000139.1                              1284328 1 +   4378816 -A
i Equus_asinus.JREZ01000139.1                            I 21 C 0
s Equus_caballus.CM000403.2                               18532148 1 -  39960074 -A
i Equus_caballus.CM000403.2                              I 21 C 0
s Equus_przewalskii.KK951119.1                               34177 1 +    498745 -A
i Equus_przewalskii.KK951119.1                           I 21 C 0
s Erinaceus_europaeus.JH835339.1                           3329020 1 -   7059049 -A
i Erinaceus_europaeus.JH835339.1                         I 17 C 0
s Erythrocebus_patas.Contig38                             21206046 2 -  21539334 TT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11788 1 +    133382 -A
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 2 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             25725 1 -     44125 -A
i Eubalaena_japonica.EubJap_flattened_line_31514         I 2 C 0
s Eulemur_albifrons.k141_576796                              40857 1 -     44621 -A
i Eulemur_albifrons.k141_576796                          C 0 C 0
s Eulemur_collaris.k141_377015                                7238 1 -     16928 -A
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              16270 1 -     25546 -A
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            13466 1 +     26330 -A
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14701 1 +     23973 -A
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                13463 1 +     75513 -A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 11393 1 +     97555 -A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              885 1 +     13026 -A
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4937 1 -     17153 -A
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              14510 1 +    111500 -A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237714 1 + 206538554 -A
i Felis_catus.CM001381.2                                 I 20 C 0
s Felis_catus_fca126.CM031415.1                           20196557 1 + 205367284 -A
i Felis_catus_fca126.CM031415.1                          I 20 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 10310 1 -     36744 -A
i Felis_nigripes.FelNig_flattened_line_20823             I 20 C 0
s Fukomys_damarensis.KN121974.1                             851163 1 +   3816255 -A
i Fukomys_damarensis.KN121974.1                          I 20 C 0
s Galago_moholi.ctg2040                                     427331 1 -    453645 -A
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             5021 1 +     11339 -A
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            2319 1 +     41679 -A
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1961 1 -      9135 -G
i Galeopterus_variegatus.GalVar_scaffold_108840          I 21 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     609367 1 -    660261 -A
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 21 C 0
s Gorilla_beringei.k141_3596273                              16845 2 -     32273 TT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186338981 2 + 186649187 TT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33374 1 +     78134 -A
i Graphiurus_murinus.GraMur_scaffold_10447               I 21 I 1
s Hapalemur_alaotrensis.k141_170648                           7565 1 -     19426 -A
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12718 1 -     15286 -A
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             14357 1 +     18253 -A
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         14458 1 -     41752 -A
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         14295 1 -     16460 -A
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243097 1 +    327341 -G
i Helogale_parvula.HelPar_flattened_line_2585            I 20 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18571 1 +     36099 -A
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 21 C 0
s Heterocephalus_glaber.JH602082.1                        20662921 1 +  22651954 -A
i Heterocephalus_glaber.JH602082.1                       I 20 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1658 1 +      7595 -A
i Heterohyrax_brucei.HetBruBak_scaffold_122365           I 21 C 0
s Hipposideros_armiger.JXIK01000431.1                       111251 1 +   1711038 -A
i Hipposideros_armiger.JXIK01000431.1                    I 2 I 2
s Hipposideros_galeritus.HipGal_scaffold_29171               42682 1 +     43066 -A
i Hipposideros_galeritus.HipGal_scaffold_29171           I 42 I 2
s Hoolock_leuconedys.ctg274                                    435646 2 +    630532 TT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45799 1 +     55795 -A
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 20 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83818 1 +    135385 -A
i Hystrix_cristata.HysCri_scaffold_5660                  I 20 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7521649 1 -   7955117 -A
i Ictidomys_tridecemlineatus.JH393364.1                  I 21 I 1
s Indri_indri.k141_3655594                                   23256 1 +     31101 -A
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               23329 1 +     23964 -A
i Inia_geoffrensis.IniGeo_flattened_line_48101           I 2 C 0
s Jaculus_jaculus.JH725527.1                               8277668 1 -   9596543 -A
i Jaculus_jaculus.JH725527.1                             I 21 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                2686 1 -      3359 -A
i Kogia_breviceps.KogBre_flattened_line_192630           I 2 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    17131 1 -     42476 -A
i Lasiurus_borealis.LasBor_scaffold_32767                I 76 C 0
s Lemur_catta.scaffold_24                                 15524810 1 -  30322482 -A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        8771 2 +     64341 TT
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           1111 2 -     35062 TT
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        8798 2 +     35603 TT
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    30411 2 +     38576 TT
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         27115 2 +     66356 TT
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         11688 1 -     23766 -A
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29749 1 +     45836 -A
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          2287 1 +     25010 -A
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27681 1 +     54090 -A
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3043819 1 +   3914936 -A
i Leptonychotes_weddellii.KB714746.1                     I 21 C 0
s Lepus_americanus.LepAme_scaffold_107385                     7245 1 -     14121 -G
i Lepus_americanus.LepAme_scaffold_107385                I 20 C 0
s Lipotes_vexillifer.KE559953.1                             268380 1 -    662738 -A
i Lipotes_vexillifer.KE559953.1                          I 2 C 0
s Lophocebus_aterrimus.ctg367                              1437997 2 +   1826925 TT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            6579 1 +     11245 -A
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1005400 1 +   6120653 -A
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4218115 1 -  43346337 -G
i Loxodonta_africana.GL010049.1                          I 20 C 0
s Lycaon_pictus.CM007581.1                                17956096 1 -  59628241 -A
i Lycaon_pictus.CM007581.1                               I 21 C 0
s Macaca_arctoides.k141_2326796                               7812 2 +     40492 TT
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59677071 2 +  60120075 TT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13587 2 -     26193 TT
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            81371 2 -    114318 TT
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  7058 2 -     23192 TT
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16531 2 -     29190 TT
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  25096 2 +     37952 TT
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186840185 2 + 187317192 TT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458748 2 -  25927173 TT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  80944 2 +     89720 TT
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 7945 2 +     20474 TT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   7745 2 -     14993 TT
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  330611 2 -    668171 TT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 6058 2 -     24072 TT
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26683 2 -     45290 TT
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91384 1 +     94391 -A
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 21 I 2
s Mandrillus_leucophaeus.scaffold280                      23938274 2 -  24302211 TT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352396 2 +    752769 TT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              19005 1 +    737560 -A
i Manis_javanica.JSZB01003497.1                          I 22 C 0
s Manis_pentadactyla.KN006162.1                              50991 1 -    317179 -A
i Manis_pentadactyla.KN006162.1                          I 22 C 0
s Marmota_marmota.CZRN01000018.1                          33103844 1 -  40650429 -A
i Marmota_marmota.CZRN01000018.1                         I 21 I 1
s Megaderma_lyra.MegLyr_scaffold_4542                        14119 1 -    207569 -A
i Megaderma_lyra.MegLyr_scaffold_4542                    I 17 I 2
s Mellivora_capensis.MelCap_flattened_line_69365             10812 1 +     13704 -A
i Mellivora_capensis.MelCap_flattened_line_69365         I 21 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 33496 1 +    140813 -G
i Meriones_unguiculatus.MerUng_scaffold_7390             I 22 C 0
s Mesocricetus_auratus.KB708134.1                         12182962 1 -  29670104 -G
i Mesocricetus_auratus.KB708134.1                        I 14 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3997 1 +     10310 -A
i Mesoplodon_bidens.MesBid_scaffold_108144               I 2 C 0
s Mico_argentatus.k141_1239457                                6929 2 -      7380 TT
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_schneideri.k141_1950671                                      6902 2 -      7356 TT
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18292237 1 -  93316391 -G
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    23207 1 -    145209 -A
i Microgale_talazaci.MicTal_scaffold_6613                I 12 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                16406 1 -     19307 -A
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 21 C 0
s Microtus_ochrogaster.CM001695.1                         11261248 1 -  27267610 -G
i Microtus_ochrogaster.CM001695.1                        I 30 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1851362 1 +   8254450 -A
i Miniopterus_natalensis.LDJU01000034.1                  I 21 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             35042 1 +     64694 -A
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 21 C 0
s Miopithecus_ogouensis.k141_534055                           9980 2 -     28506 TT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6687 1 -      8324 -A
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 21 C 0
s Mirza_zaza.k141_952172                                      9781 1 -     37649 -G
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    27502 1 -    437263 -A
i Monodon_monoceros.MonMon_M_scaffold_103                I 2 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142406 1 -    366855 -A
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 21 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   1447 1 +     82753 -A
i Moschus_moschiferus.MosMos_scaffold_13123              I 21 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   36197 1 +     37127 -G
i Mungos_mungo.MunMun_flattened_line_23663               I 20 C 0
s Murina_feae.MurFea_scaffold_85699                           7589 1 +     14753 -A
i Murina_feae.MurFea_scaffold_85699                      I 19 C 0
s Mus_caroli.LT608237.1                                   84362110 1 - 120012414 -G
i Mus_caroli.LT608237.1                                  I 21 C 0
s Mus_musculus.chr8                                       87651103 1 - 129401213 -G
i Mus_musculus.chr8                                      I 21 C 0
s Mus_pahari.LT608297.1                                   31355760 1 -  89631738 -G
i Mus_pahari.LT608297.1                                  I 21 C 0
s Mus_spretus.CM004101.1                                  90753166 1 - 130317789 -G
i Mus_spretus.CM004101.1                                 I 21 C 0
s Mustela_putorius.JH418006.1                               302224 1 -  14710649 -A
i Mustela_putorius.JH418006.1                            I 21 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71949 1 -     80779 -A
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 20 C 0
s Myotis_brandtii.KE162005.1                                281224 1 -  10118263 -A
i Myotis_brandtii.KE162005.1                             I 19 C 0
s Myotis_davidii.KB100139.1                                1588480 1 -   6019432 -A
i Myotis_davidii.KB100139.1                              I 19 C 0
s Myotis_lucifugus.GL429869.1                              3904577 1 -   4330536 -A
i Myotis_lucifugus.GL429869.1                            I 19 I 3
s Myotis_myotis.MyoMyo_scaffold_281845                         727 1 +      1835 -A
i Myotis_myotis.MyoMyo_scaffold_281845                   I 77 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190005 1 +    196477 -A
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 25 C 0
s Nannospalax_galili.KL204047.1                            2034808 1 -   3037898 -G
i Nannospalax_galili.KL204047.1                          I 21 C 0
s Nasalis_larvatus.k141_413338                               15982 2 +     21681 TT
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308273 1 +  31847680 -A
i Neomonachus_schauinslandi.NINY01007730.1               I 21 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5866458 1 +   7148211 -A
i Neophocaena_asiaeorientalis.KZ687982.1                 I 2 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    758641 1 +    783361 -A
i Noctilio_leporinus.NocLep_scaffold_251                 I 21 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150159 1 -   9404916 -A
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 21 C 0
s Nycticebus_bengalensis.LG01                            102586944 1 - 196305487 -A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              868 1 +      2075 -A
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105762299 1 + 199412804 -A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                              507415 1 -   2017862 -A
i Odobenus_rosmarus.KB229312.1                           I 21 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          77284 1 -    150152 -A
i Okapia_johnstoni.LVCL01S0005463.1                      I 21 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   25901 1 +     28053 -G
i Ondatra_zibethicus.OndZib_scaffold_46174               I 23 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    80940 1 +    102263 -G
i Onychomys_torridus.OnyTor_scaffold_2986                I 21 C 0
s Orcinus_orca.KB316932.1                                  2782381 1 -  10937097 -A
i Orcinus_orca.KB316932.1                                I 2 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387              10876 1 -     18566 -A
i Orycteropus_afer.OryAfe_flattened_line_144387          I 21 C 0
s Oryctolagus_cuniculus.CM000791.1                        67148105 1 + 174332312 -G
i Oryctolagus_cuniculus.CM000791.1                       I 20 I 1
s Otocyon_megalotis.JAEUCK010005147.1                       463108 1 -    559221 -A
i Otocyon_megalotis.JAEUCK010005147.1                    I 21 C 0
s Otolemur_crassicaudatus.k141_222918                         4851 1 +      8798 -A
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             697014 1 -   1103335 -A
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   17586546 1 +  44047080 -A
i Ovis_aries.CM001607.2                                  I 21 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      174523 1 -    191736 -A
i Ovis_canadensis.OviCan_scaffold_2572                   I 21 C 0
s Pan_paniscus.KQ411613.1                                    44933 2 +     80009 TT
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189143832 2 + 189151597 TT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  151918 1 +    230217 -A
i Panthera_onca.PanOnc_flattened_line_3271               I 20 C 0
s Panthera_pardus.KV860321.1                                265127 1 +  18783137 -A
i Panthera_pardus.KV860321.1                             I 20 C 0
s Panthera_tigris.KE722367.1                               4722007 1 -   8748460 -A
i Panthera_tigris.KE722367.1                             I 20 C 0
s Pantholops_hodgsonii.KE114653.1                          1265440 1 -   2937107 -A
i Pantholops_hodgsonii.KE114653.1                        I 21 C 0
s Papio_anubis.CM001495.2                                183444074 2 + 183742232 TT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7720 2 +     20448 TT
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20564532 2 +  20919399 TT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6464 2 +     41871 TT
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     9757 2 +     27711 TT
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                   754 2 -     11374 TT
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13419 1 -     78924 -A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 20 C 0
s Perodicticus_ibeanus.k141_855320                           10838 1 +     13100 -A
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             9232 1 +     25941 -A
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18195520 1 -  18517816 -T
i Peromyscus_maniculatus.KI615324.1                      I 21 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28831 1 -     29689 -A
i Petromus_typicus.PetTyp_scaffold_42190                 I 21 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               9420 1 +     63832 -A
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 2 C 0
s Piliocolobus_badius.k141_1234363                           44473 2 +     62158 TT
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        39220 2 +     89929 TT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40636 2 +     51399 TT
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296875 2 -  14605196 tt
i Piliocolobus_tephrosceles.PDMG02000141.1               I 1 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           35126 1 +     35617 -A
i Platanista_gangetica.PlaMin_flattened_line_32310       I 2 C 0
s Pongo_abelii.CM009266.2                                189131977 2 + 189387572 TT
i Pongo_abelii.CM009266.2                                T 24610 C 0
s Pongo_pygmaeus.ctg66                                     9571584 2 +   9816681 TT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               74157 2 -     81375 TT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              5978 2 +     19060 TT
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 14113 1 -     22811 -A
i Procavia_capensis.ProCapCap_scaffold_85530             I 21 C 0
s Prolemur_simus.MPIZ01000396.1                            2597490 1 -   4620579 -A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     991477 1 +   2598838 -A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29789 1 +     38485 -A
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1831 1 -     13098 -A
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          27310 1 +     35766 -A
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           5497 1 -     24134 -A
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        29322 1 -     67325 -A
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           5545 1 -      6182 -A
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            11142 1 -     21651 -G
i Psammomys_obesus.NESX01036370.1                        I 22 C 0
s Pteronotus_parnellii.KE909381.1                            15915 1 -     21811 -A
i Pteronotus_parnellii.KE909381.1                        I 21 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41007 1 +     42204 -A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 21 C 0
s Pteropus_alecto.KB030862.1                              22977530 1 +  28871421 -A
i Pteropus_alecto.KB030862.1                             I 21 I 2
s Pteropus_vampyrus.KN534172.1                                7583 1 -      8028 -A
i Pteropus_vampyrus.KN534172.1                           I 21 I 2
s Puma_concolor.QAVW01001104.1                            20275079 1 -  38429054 -A
i Puma_concolor.QAVW01001104.1                           I 20 C 0
s Pygathrix_cinerea.k141_1153803                             15964 2 -     91421 TT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7610084 2 +   7812017 TT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             15963 2 -     72585 TT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6023 1 +     55207 -A
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 21 C 0
s Rattus_norvegicus.chr16                                 53571358 1 +  90668790 -A
i Rattus_norvegicus.chr16                                I 21 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        367739 1 -   3329780 -A
i Rhinolophus_sinicus.LVEH01000134.1                     I 2 I 2
s Rhinopithecus_bieti.k119_217274                             7674 2 -     11128 TT
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91237023 2 - 195417433 TT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672679 2 +   7961872 TT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_8081                                  2087 2 +     42994 TT
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                              780 2 +      2253 TT
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               1209 2 -      8737 TT
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                               862 2 +      2343 TT
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209475741 2 + 209938924 TT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                 185 2 -      7576 TT
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951809 2 - 121099817 TT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24151 2 +     46362 TT
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               24246 2 +     45824 TT
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             40925 2 -     64574 TT
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               3998 2 -     23631 TT
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 24142 2 -     61129 TT
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5421491 2 -   5703754 TT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          56732 2 -     80660 TT
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153952 1 -    313613 -A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 21 C 0
s Semnopithecus_entellus.k141_1672505                          855 2 -     12572 TT
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27705 2 +     39453 TT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            8223 2 +     27826 TT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             7745 2 -     19483 TT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      1046 2 -     12762 TT
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                            907 2 +     13763 TT
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     1051 1 -     30804 -G
i Sigmodon_hispidus.SigHis_scaffold_42075                I 21 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               4513 1 +   1910179 -T
i Solenodon_paradoxus.SolPar_flattened_line_126          I 21 C 0
s Sorex_araneus.JH798187.1                                13651753 1 -  18376816 -a
i Sorex_araneus.JH798187.1                               I 33 C 0
s Spermophilus_dauricus.KZ294078.1                         1954702 1 -   3870691 -A
i Spermophilus_dauricus.KZ294078.1                       I 21 I 1
s Spilogale_gracilis.SpiGra_flattened_line_13525             31497 1 +     97271 -A
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 21 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              19099 1 -    196729 -G
i Suricata_suricatta.SurSur_flattened_line_6629          I 20 C 0
s Sus_scrofa.CM000828.4                                    6812035 1 +  69701581 -A
i Sus_scrofa.CM000828.4                                  I 487 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                11568 1 +     41958 -A
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 21 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73364 1 +    116680 -A
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 25 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    388001 1 +    539355 -A
i Tapirus_terrestris.TapTer_scaffold_755                 I 21 C 0
s Theropithecus_gelada.CM009954.1                        186429392 2 + 186847797 TT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106135 1 +    114563 -A
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 20 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   7138 1 +      8208 -A
i Tolypeutes_matacus.TolMat_scaffold_228639              I 26 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81962 1 +    610378 -A
i Tonatia_saurophila.TonSau_scaffold_294                 I 21 C 0
s Trachypithecus_auratus.k141_722599                         11796 2 -     20410 TT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                       910 2 -     12674 TT
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       11897 2 +     19930 TT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       8308 2 -     19997 TT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48447 2 -     60166 TT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        15919 2 -     27529 TT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     15863 2 -     18194 TT
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9575 2 -     21137 TT
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    8278 2 -     10723 TT
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7450 2 +      9834 TT
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        25763 2 +     32220 TT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5939865 2 +   6242583 TT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        9116 2 +     20839 TT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                   1695 1 -      1748 -A
i Tragulus_javanicus.TraJav_scaffold_140459              I 20 C 0
s Trichechus_manatus.JH594705.1                            4294020 1 +  10818551 -A
i Trichechus_manatus.JH594705.1                          I 25 C 0
s Tupaia_chinensis.KB320699.1                              2156563 1 +   4065304 -A
i Tupaia_chinensis.KB320699.1                            I 18 C 0
s Tupaia_tana.TupTan_flattened_line_97126                    10006 1 -     10553 -A
i Tupaia_tana.TupTan_flattened_line_97126                I 18 C 0
s Tursiops_truncatus.MRVK01000835.1                       15738620 1 +  33153633 -A
i Tursiops_truncatus.MRVK01000835.1                      I 2 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54062 1 -     77625 -A
i Uropsilus_gracilis.UroGra_scaffold_12083               I 21 C 0
s Ursus_maritimus.KK499267.1                               4851208 1 -   5085361 -A
i Ursus_maritimus.KK499267.1                             I 21 C 0
s Varecia_rubra.k141_590885                                  12155 1 +     50397 -A
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             12214 1 +     24756 -A
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5372528 1 -   5488506 -A
i Vicugna_pacos.KN270157.1                               I 14 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 11559 1 -     43706 -A
i Vulpes_lagopus.VulLag_flattened_line_30954             I 21 C 0
s Xerus_inauris.XerIna_scaffold_2302                          1836 1 +    224448 -A
i Xerus_inauris.XerIna_scaffold_2302                     I 24 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      15637 1 +     63895 -A
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 21 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            12312 1 +     12536 -A
i Ziphius_cavirostris.ZipCav_flattened_line_71469        I 2 C 0
e Chiropotes_albinasus.k141_2206961                           1651 303 -     15524 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Tarsius_wallacei.k141_254427                                1877 3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080 3 +     70052 I
e Tapirus_indicus.TapInd_scaffold_9301                      119524 16 -    156842 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                88550 20 -     96226 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             2503 16 +     22620 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Ochotona_princeps.JH802162.1                             1364602 17 +   3988456 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Glis_glis.GliGli_scaffold_19807                            32063 0 +     49224 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    837828 15 +   1526836 I
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           1226 2 +     23735 I
e Cephalopachus_bancanus.k141_1423433                         6085 3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Carlito_syrichta.NW_007259797.1                           156587 3 -    496798 I
e Arctocebus_calabarensis.k141_2318572                       12167 0 +     14667 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       7592 1 +     62944 A
s Allenopithecus_nigroviridis.k141_3361533                   15521 1 -     52922 A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15441 1 -     28001 A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          5939 1 -     18505 A
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           6791 1 -     12518 A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              8371 1 +     51355 A
i Alouatta_belzebul.k141_3560514                         I 4 I 2
s Alouatta_caraya.k141_1701091                                1480 1 -     36483 A
i Alouatta_caraya.k141_1701091                           I 4 I 2
s Alouatta_discolor.k141_566626                              11932 1 +     28687 A
i Alouatta_discolor.k141_566626                          I 4 I 2
s Alouatta_juara.k141_1302312                                  445 1 +     27940 A
i Alouatta_juara.k141_1302312                            I 4 I 2
s Alouatta_macconnelli.k141_918386                            1489 1 -      9457 A
i Alouatta_macconnelli.k141_918386                       I 4 I 2
s Alouatta_nigerrima.k141_1929159                              445 1 +     30492 A
i Alouatta_nigerrima.k141_1929159                        I 4 I 2
s Alouatta_palliata.k141_2135620                              4440 1 +     47717 A
i Alouatta_palliata.k141_2135620                         I 4 I 2
s Alouatta_puruensis.k141_362188                              1172 1 +      5663 A
i Alouatta_puruensis.k141_362188                         I 4 I 2
s Alouatta_seniculus.k141_117119                             15624 1 +     50774 A
i Alouatta_seniculus.k141_117119                         I 4 I 2
s Aotus_azarae.k141_3104676                                  16613 1 -     33861 A
i Aotus_azarae.k141_3104676                              C 0 I 2
s Aotus_griseimembra.k141_2240599                            16610 1 -     34016 A
i Aotus_griseimembra.k141_2240599                        C 0 I 2
s Aotus_nancymaae.KZ198451.1                               4299037 1 -   5030052 a
i Aotus_nancymaae.KZ198451.1                             C 0 I 2
s Aotus_trivirgatus.k141_2152450                             16646 1 -     34685 A
i Aotus_trivirgatus.k141_2152450                         C 0 I 2
s Aotus_vociferans.k141_344750                               29771 1 -     47192 A
i Aotus_vociferans.k141_344750                           C 0 I 2
s Avahi_laniger.k141_765380                                  54434 1 -     92717 T
i Avahi_laniger.k141_765380                              C 0 I 21
s Avahi_peyrierasi.k141_1424874                              55065 1 +     85213 T
i Avahi_peyrierasi.k141_1424874                          C 0 I 21
s Callibella_humilis.k141_1278103                             6495 1 -     10423 A
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callithrix_geoffroyi.k119_69176                              334 1 +      5377 A
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592195 1 - 189096842 A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1009 1 -     12329 A
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Cebuella_niveiventris.k141_1251222                         10935 1 -     11392 A
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               7119 1 -      7577 A
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25653539 1 +  26074798 A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                1477 1 +     28840 A
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 1202 1 +     14051 A
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Cercocebus_atys.KQ010504.1                               4476456 1 +   4669795 C
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                         958 1 +     17872 C
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           1615 1 -     14043 C
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9648 1 +     27781 C
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         9816 1 -     20310 A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          12796 1 +     29689 A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7542 1 -     20078 A
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          15464 1 -     27936 A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            4330 1 -     17152 A
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38817875 1 +  39242232 G
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223564 1 -  21565898 A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40683 1 -     53127 A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                         934 1 +     13442 A
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15483 1 -     27947 A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         15459 1 +     17596 A
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          1502 1 +     14005 A
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheirogaleus_major.k141_333249                             21812 1 -     52598 T
i Cheirogaleus_major.k141_333249                         C 0 I 21
s Cheirogaleus_medius.k141_1055463                           17183 1 +     57038 T
i Cheirogaleus_medius.k141_1055463                       C 0 I 21
s Chlorocebus_aethiops.ctg25                              18429443 1 -  18827391 A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15879 1 -     50209 A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422880 1 + 135778131 A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1911356 1 +   2368649 A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949608 1 + 200372422 A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37890 1 +     84244 G
i Colobus_polykomos.k141_906115                          C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12538015 1 -  12879189 T
i Daubentonia_madagascariensis.ctg71                     C 0 I 21
s Erythrocebus_patas.Contig38                             21206048 1 -  21539334 A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_576796                              40858 1 -     44621 T
i Eulemur_albifrons.k141_576796                          C 0 I 21
s Eulemur_collaris.k141_377015                                7239 1 -     16928 T
i Eulemur_collaris.k141_377015                           C 0 I 21
s Eulemur_coronatus.k141_885031                              16271 1 -     25546 T
i Eulemur_coronatus.k141_885031                          C 0 I 21
s Eulemur_flavifrons.k141_1184614                            13467 1 +     26330 T
i Eulemur_flavifrons.k141_1184614                        C 0 I 21
s Eulemur_fulvus.k141_544389                                 14702 1 +     23973 T
i Eulemur_fulvus.k141_544389                             C 0 I 21
s Eulemur_macaco.k141_1562045                                13464 1 +     75513 T
i Eulemur_macaco.k141_1562045                            C 0 I 21
s Eulemur_mongoz.k141_232305                                 11394 1 +     97555 T
i Eulemur_mongoz.k141_232305                             C 0 I 21
s Eulemur_rubriventer.k141_774594                              886 1 +     13026 T
i Eulemur_rubriventer.k141_774594                        C 0 I 21
s Eulemur_rufus.k141_1476633                                  4938 1 -     17153 T
i Eulemur_rufus.k141_1476633                             C 0 I 21
s Eulemur_sanfordi.k141_1122526                              14511 1 +    111500 T
i Eulemur_sanfordi.k141_1122526                          C 0 I 21
s Galago_moholi.ctg2040                                     427332 1 -    453645 T
i Galago_moholi.ctg2040                                  C 0 I 21
s Galago_senegalensis.k141_631886                             5022 1 +     11339 T
i Galago_senegalensis.k141_631886                        C 0 I 21
s Galagoides_demidoff.k141_1711393                            2320 1 +     41679 T
i Galagoides_demidoff.k141_1711393                       C 0 I 21
s Galeopterus_variegatus.GalVar_scaffold_108840               1962 1 -      9135 A
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              16847 1 -     32273 A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186338983 1 + 186649187 A
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           7566 1 -     19426 C
i Hapalemur_alaotrensis.k141_170648                      C 0 I 21
s Hapalemur_gilberti.k141_488810                             12719 1 -     15286 C
i Hapalemur_gilberti.k141_488810                         C 0 I 21
s Hapalemur_griseus.k141_1511508                             14358 1 +     18253 C
i Hapalemur_griseus.k141_1511508                         C 0 I 21
s Hapalemur_meridionalis.k141_248335                         14459 1 -     41752 C
i Hapalemur_meridionalis.k141_248335                     C 0 I 21
s Hapalemur_occidentalis.k141_907772                         14296 1 -     16460 C
i Hapalemur_occidentalis.k141_907772                     C 0 I 21
s Hoolock_leuconedys.ctg274                                    435648 1 +    630532 A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Indri_indri.k141_3655594                                   23257 1 +     31101 T
i Indri_indri.k141_3655594                               C 0 I 21
s Lemur_catta.scaffold_24                                 15524811 1 -  30322482 T
i Lemur_catta.scaffold_24                                C 0 I 21
s Leontocebus_fuscicollis.k141_1820339                        8773 1 +     64341 A
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           1113 1 -     35062 A
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        8800 1 +     35603 A
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    30413 1 +     38576 A
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         27117 1 +     66356 A
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         11689 1 -     23766 T
i Lepilemur_ankaranensis.k141_596936                     C 0 I 22
s Lepilemur_dorsalis.k141_577674                             29750 1 +     45836 T
i Lepilemur_dorsalis.k141_577674                         C 0 I 22
s Lepilemur_ruficaudatus.k141_121139                          2288 1 +     25010 T
i Lepilemur_ruficaudatus.k141_121139                     C 0 I 21
s Lepilemur_septentrionalis.k141_185316                      27682 1 +     54090 T
i Lepilemur_septentrionalis.k141_185316                  C 0 I 22
s Lophocebus_aterrimus.ctg367                              1437999 1 +   1826925 C
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            6580 1 +     11245 T
i Loris_lydekkerianus.k141_2539221                       C 0 I 21
s Loris_tardigradus.ctg83                                  1005401 1 +   6120653 T
i Loris_tardigradus.ctg83                                C 0 I 21
s Macaca_arctoides.k141_2326796                               7814 1 +     40492 C
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59677073 1 +  60120075 C
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13589 1 -     26193 C
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            81373 1 -    114318 C
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  7060 1 -     23192 C
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16533 1 -     29190 C
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  25098 1 +     37952 C
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186840187 1 + 187317192 C
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458750 1 -  25927173 C
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  80946 1 +     89720 C
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 7947 1 +     20474 C
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   7747 1 -     14993 C
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  330613 1 -    668171 C
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 6060 1 -     24072 C
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26685 1 -     45290 C
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23938276 1 -  24302211 C
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352398 1 +    752769 C
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Mico_argentatus.k141_1239457                                6931 1 -      7380 A
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_schneideri.k141_1950671                                      6904 1 -      7356 A
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18292238 1 -  93316391 T
i Microcebus_murinus.CM007674.1                          C 0 I 21
s Miopithecus_ogouensis.k141_534055                           9982 1 -     28506 A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirza_zaza.k141_952172                                      9782 1 -     37649 T
i Mirza_zaza.k141_952172                                 C 0 I 21
s Nasalis_larvatus.k141_413338                               15984 1 +     21681 A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nycticebus_bengalensis.LG01                            102586945 1 - 196305487 T
i Nycticebus_bengalensis.LG01                            C 0 I 21
s Nycticebus_coucang.k141_1127096                              869 1 +      2075 T
i Nycticebus_coucang.k141_1127096                        C 0 I 21
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105762300 1 + 199412804 T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 21
s Otolemur_crassicaudatus.k141_222918                         4852 1 +      8798 T
i Otolemur_crassicaudatus.k141_222918                    C 0 I 21
s Otolemur_garnettii.GL873799.1                             697015 1 -   1103335 T
i Otolemur_garnettii.GL873799.1                          C 0 I 21
s Pan_paniscus.KQ411613.1                                    44935 1 +     80009 A
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189143834 1 + 189151597 A
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                183444076 1 + 183742232 C
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7722 1 +     20448 C
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20564534 1 +  20919399 C
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6466 1 +     41871 C
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     9759 1 +     27711 C
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                   756 1 -     11374 C
i Papio_ursinus.k141_5274964                             C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10839 1 +     13100 T
i Perodicticus_ibeanus.k141_855320                       C 0 I 21
s Perodicticus_potto.k141_1092580                             9233 1 +     25941 T
i Perodicticus_potto.k141_1092580                        C 0 I 21
s Piliocolobus_badius.k141_1234363                           44475 1 +     62158 A
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        39222 1 +     89929 A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40638 1 +     51399 A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296877 1 -  14605196 a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189131979 1 + 189387572 A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9571586 1 +   9816681 A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               74159 1 -     81375 A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              5980 1 +     19060 A
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2597491 1 -   4620579 T
i Prolemur_simus.MPIZ01000396.1                          C 0 I 21
s Propithecus_coquerelli.NW_012148875.1                     991478 1 +   2598838 T
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 21
s Propithecus_coronatus.k141_347390                          29790 1 +     38485 T
i Propithecus_coronatus.k141_347390                      C 0 I 21
s Propithecus_diadema.k141_58108                              1832 1 -     13098 T
i Propithecus_diadema.k141_58108                         C 0 I 21
s Propithecus_edwardsi.k141_1176054                          27311 1 +     35766 T
i Propithecus_edwardsi.k141_1176054                      C 0 I 21
s Propithecus_perrieri.k141_1200571                           5498 1 -     24134 T
i Propithecus_perrieri.k141_1200571                      C 0 I 21
s Propithecus_tattersalli.k141_790011                        29323 1 -     67325 T
i Propithecus_tattersalli.k141_790011                    C 0 I 21
s Propithecus_verreauxi.k141_956661                           5546 1 -      6182 T
i Propithecus_verreauxi.k141_956661                      C 0 I 21
s Pygathrix_cinerea.k141_1153803                             15966 1 -     91421 A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7610086 1 +   7812017 A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             15965 1 -     72585 A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             7676 1 -     11128 A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91237025 1 - 195417433 A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672681 1 +   7961872 A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_8081                                  2089 1 +     42994 A
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                              782 1 +      2253 A
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               1211 1 -      8737 A
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                               864 1 +      2343 A
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209475743 1 + 209938924 A
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                 187 1 -      7576 A
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951811 1 - 121099817 A
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24153 1 +     46362 A
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               24248 1 +     45824 A
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             40927 1 -     64574 A
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4000 1 -     23631 A
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 24144 1 -     61129 A
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5421493 1 -   5703754 A
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          56734 1 -     80660 A
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Semnopithecus_entellus.k141_1672505                          857 1 -     12572 A
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27707 1 +     39453 A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            8225 1 +     27826 A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             7747 1 -     19483 G
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      1048 1 -     12762 A
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                            909 1 +     13763 A
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Theropithecus_gelada.CM009954.1                        186429394 1 + 186847797 C
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                         11798 1 -     20410 A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                       912 1 -     12674 A
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       11899 1 +     19930 A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       8310 1 -     19997 A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48449 1 -     60166 A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        15921 1 -     27529 A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     15865 1 -     18194 A
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9577 1 -     21137 A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    8280 1 -     10723 A
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7452 1 +      9834 A
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        25765 1 +     32220 G
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5939867 1 +   6242583 A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        9118 1 +     20839 A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2156564 1 +   4065304 A
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                    10007 1 -     10553 A
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Varecia_rubra.k141_590885                                  12156 1 +     50397 T
i Varecia_rubra.k141_590885                              C 0 I 21
s Varecia_variegata.k141_1128296                             12215 1 +     24756 T
i Varecia_variegata.k141_1128296                         C 0 I 21
e Echinops_telfairi.JH980293.1                            48781328 0 + 111700974 C
e Chiropotes_albinasus.k141_2206961                           1651 303 -     15524 I
e Mus_pahari.LT608297.1                                   31355761 0 -  89631738 C
e Mus_spretus.CM004101.1                                  90753167 0 - 130317789 C
e Mus_musculus.chr8                                       87651104 0 - 129401213 C
e Mus_caroli.LT608237.1                                   84362111 0 - 120012414 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_71469            12313 0 +     12536 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      15638 0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Xerus_inauris.XerIna_scaffold_2302                          1837 0 +    224448 C
e Vulpes_lagopus.VulLag_flattened_line_30954                 11560 0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5372529 0 -   5488506 C
e Ursus_maritimus.KK499267.1                               4851209 0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   54063 0 -     77625 C
e Tursiops_truncatus.MRVK01000835.1                       15738621 0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4294021 0 +  10818551 C
e Tragulus_javanicus.TraJav_scaffold_140459                   1696 0 -      1748 C
e Tonatia_saurophila.TonSau_scaffold_294                     81963 0 +    610378 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   7139 0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              106136 0 +    114563 C
e Tarsius_wallacei.k141_254427                                1877 3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080 3 +     70052 I
e Tapirus_terrestris.TapTer_scaffold_755                    388002 0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      119524 16 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73365 0 +    116680 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                11569 0 +     41958 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6812036 0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629              19100 0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             31498 0 +     97271 C
e Spermophilus_dauricus.KZ294078.1                         1954703 1 -   3870691 I
e Sorex_araneus.JH798187.1                                13651754 0 -  18376816 C
e Solenodon_paradoxus.SolPar_flattened_line_126               4514 0 +   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_42075                     1052 0 -     30804 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    153953 0 -    313613 C
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                88550 20 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        367740 2 -   3329780 I
e Rattus_norvegicus.chr16                                 53571359 0 +  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  6024 0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20275080 0 -  38429054 C
e Pteropus_vampyrus.KN534172.1                                7584 2 -      8028 I
e Pteropus_alecto.KB030862.1                              22977531 2 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         41008 0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            15916 0 -     21811 C
e Psammomys_obesus.NESX01036370.1                            11143 0 -     21651 C
e Procavia_capensis.ProCapCap_scaffold_85530                 14114 0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35127 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             2503 16 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9421 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     28832 0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18195521 0 -  18517816 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13420 0 -     78924 C
e Pantholops_hodgsonii.KE114653.1                          1265441 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4722008 0 -   8748460 C
e Panthera_pardus.KV860321.1                                265128 0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  151919 0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      174524 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586547 0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       463109 0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                        67148106 1 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              10877 0 -     18566 C
e Orcinus_orca.KB316932.1                                  2782382 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    80941 0 +    102263 C
e Ondatra_zibethicus.OndZib_scaffold_46174                   25902 0 +     28053 C
e Okapia_johnstoni.LVCL01S0005463.1                          77285 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              507416 0 -   2017862 C
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Ochotona_princeps.JH802162.1                             1364602 17 +   3988456 I
e Nyctereutes_procyonoides.CAJHUB010000658.1               9150160 0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    758642 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866459 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20308274 0 +  31847680 C
e Nannospalax_galili.KL204047.1                            2034809 0 -   3037898 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190006 0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_281845                         728 0 +      1835 C
e Myotis_lucifugus.GL429869.1                              3904578 3 -   4330536 I
e Myotis_davidii.KB100139.1                                1588481 0 -   6019432 C
e Myotis_brandtii.KE162005.1                                281225 0 -  10118263 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     71950 0 -     80779 C
e Mustela_putorius.JH418006.1                               302225 0 -  14710649 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           7590 0 +     14753 C
e Mungos_mungo.MunMun_flattened_line_23663                   36198 0 +     37127 C
e Moschus_moschiferus.MosMos_scaffold_13123                   1448 0 +     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 142407 0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    27503 0 -    437263 C
e Mirounga_angustirostris.MirAng_flattened_line_93702         6688 0 -      8324 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             35043 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1851363 0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11261249 0 -  27267610 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                16407 0 -     19307 C
e Microgale_talazaci.MicTal_scaffold_6613                    23208 0 -    145209 C
e Mesoplodon_bidens.MesBid_scaffold_108144                    3998 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12182963 0 -  29670104 C
e Meriones_unguiculatus.MerUng_scaffold_7390                 33497 0 +    140813 C
e Mellivora_capensis.MelCap_flattened_line_69365             10813 0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                        14120 2 -    207569 I
e Marmota_marmota.CZRN01000018.1                          33103845 1 -  40650429 I
e Manis_pentadactyla.KN006162.1                              50992 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              19006 0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 91385 2 +     94391 I
e Lycaon_pictus.CM007581.1                                17956097 0 -  59628241 C
e Loxodonta_africana.GL010049.1                            4218116 0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268381 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     7246 0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3043820 0 +   3914936 C
e Lasiurus_borealis.LasBor_scaffold_32767                    17132 0 -     42476 C
e Kogia_breviceps.KogBre_flattened_line_192630                2687 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8277669 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23330 0 +     23964 C
e Ictidomys_tridecemlineatus.JH393364.1                    7521650 1 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      83819 0 +    135385 C
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  45800 0 +     55795 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42683 2 +     43066 I
e Hipposideros_armiger.JXIK01000431.1                       111252 2 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                1659 0 +      7595 C
e Heterocephalus_glaber.JH602082.1                        20662922 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18572 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               243098 0 +    327341 C
e Graphiurus_murinus.GraMur_scaffold_10447                   33375 1 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            32063 0 +     49224 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609368 0 -    660261 C
e Fukomys_damarensis.KN121974.1                             851164 0 +   3816255 C
e Felis_nigripes.FelNig_flattened_line_20823                 10311 0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20196558 0 + 205367284 C
e Eubalaena_japonica.EubJap_flattened_line_31514             25726 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           11789 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3329021 0 -   7059049 C
e Equus_przewalskii.KK951119.1                               34178 0 +    498745 C
e Equus_caballus.CM000403.2                               18532149 0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1284329 0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2146482 0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16330073 0 -  41312741 C
e Ellobius_talpinus.LOJH01081419.1                            1176 0 +      8657 C
e Ellobius_lutescens.LOEQ01008920.1                          21270 0 -    110024 C
e Elephantulus_edwardii.JH947257.1                         1098489 0 +  10337057 C
e Elaphurus_davidianus.JRFZ01104969.1                       311403 0 +    607251 C
e Eidolon_helvum.KE759718.1                                  11291 2 +     11740 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    37114 0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    6820 0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674069 0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8630866 0 +  20541912 C
e Delphinapterus_leucas.KZ290073.1                        16812113 0 +  35494412 C
e Dasypus_novemcinctus.JH564415.1                            64267 0 +   2246927 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  36630 0 +     51376 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    837828 15 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             29260 0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_37019               3714 0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11668301 0 + 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_18520                 50788 0 +     63868 C
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           1226 2 +     23735 I
e Condylura_cristata.JH655891.1                           17548809 0 -  53390261 C
e Choloepus_hoffmanni.KN194906.1                            174139 0 +    839153 C
e Choloepus_didactylus.ChoDid_scaffold_45914                 19064 0 +     19366 C
e Chinchilla_lanigera.JH722012.1                           1253636 0 +   2543920 C
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1249 0 -      8501 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3247 0 -     25243 C
e Cephalopachus_bancanus.k141_1423433                         6085 3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     94293 0 +    217609 C
e Castor_canadensis.CasCan_scaffold_2074                    137867 0 +    179628 C
e Carollia_perspicillata.CarPer_scaffold_92756                5870 0 -     11696 C
e Carlito_syrichta.NW_007259797.1                           156587 3 -    496798 I
e Capromys_pilorides.CapPil_scaffold_65020                    1762 0 -     12242 C
e Capra_hircus.CM004588.1                                 18061086 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830366 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18501154 0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17959857 0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9035381 0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_27089                      686 0 -     43241 C
e CanFam4.chr16                                           17799938 0 -  60362399 C
e Camelus_ferus.KB017975.1                                  403769 0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2335472 0 -   7040546 C
e Camelus_bactrianus.KN276810.1                           10002996 0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2819738 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084070 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1125988 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273432 0 +  48749331 C
e Bison_bison.KN261452.1                                    200227 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27171 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         2942 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192477 0 +  23207421 C
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  5503 0 +     43469 C
e Arctocebus_calabarensis.k141_2318572                       12167 0 +     14667 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      13370 0 +     20879 C
e Antilocapra_americana.AntAmePen_scaffold_12469             98731 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      186113 0 +    412891 C
e Ammotragus_lervia.NIVO01071767.1                          676248 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     75255 0 -     89534 C
e Ailurus_fulgens.LNAC01001112.1                             80083 0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9511349 0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     71548 0 +     87051 C
e Acinonyx_jubatus.LLWD01001279.1                           828073 0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       7593 20 +     62944 C-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
s Acinonyx_jubatus.LLWD01001279.1                           828073 20 -   1699592 C-AA---------------------C-ACTTC----A---A--A-AT--------------------AC-AA------Ct
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     71548 20 +     87051 C-AA---------------------T-GCCTT----A---A--A-AT--------------------GC-AG------CT
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511349 19 -  29979442 C-AA---------------------C-ACT-C----A---A--A-AT--------------------AC-AA------CC
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             80083 20 -    347723 C-AA---------------------C-ACTTC----A---A--A-AT--------------------AC-AA------CC
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     75255 20 -     89534 T-AG---------------------C-AAGTC----A---A--A-AC--------------------AT-AA------CT
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   15522 20 -     52922 T-AA---------------------C-ACTTC----A---A--A-AC--------------------AC-AA------CT
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15442 20 -     28001 T-AA---------------------C-ACTTC----A---G--A-AC--------------------AC-AA------CT
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          5940 20 -     18505 T-AA---------------------C-ACTTC----A---A--A-AC--------------------AC-AA------CT
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           6792 20 -     12518 T-AA---------------------C-ACTTC----A---A--A-AC--------------------AC-AA------CT
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              8374 15 +     51355 ----------------------------CTTA----A---A--A-AC--------------------GC-AA------CT
i Alouatta_belzebul.k141_3560514                         I 2 C 0
s Alouatta_caraya.k141_1701091                                1483 15 -     36483 ----------------------------CTTA----A---A--A-AC--------------------AC-AA------CT
i Alouatta_caraya.k141_1701091                           I 2 C 0
s Alouatta_discolor.k141_566626                              11935 15 +     28687 ----------------------------CTTA----A---A--A-AC--------------------GC-AA------CT
i Alouatta_discolor.k141_566626                          I 2 C 0
s Alouatta_juara.k141_1302312                                  448 15 +     27940 ----------------------------CTTA----A---A--A-AC--------------------GC-AA------CT
i Alouatta_juara.k141_1302312                            I 2 C 0
s Alouatta_macconnelli.k141_918386                            1492 15 -      9457 ----------------------------CTTA----A---A--A-AC--------------------GC-AA------CT
i Alouatta_macconnelli.k141_918386                       I 2 C 0
s Alouatta_nigerrima.k141_1929159                              448 15 +     30492 ----------------------------CTTA----A---A--A-AC--------------------GC-AA------CT
i Alouatta_nigerrima.k141_1929159                        I 2 C 0
s Alouatta_palliata.k141_2135620                              4443 15 +     47717 ----------------------------CTTA----A---A--A-AC--------------------GC-AA------CT
i Alouatta_palliata.k141_2135620                         I 2 C 0
s Alouatta_puruensis.k141_362188                              1175 15 +      5663 ----------------------------CTTA----A---A--A-AC--------------------GC-AA------CT
i Alouatta_puruensis.k141_362188                         I 2 C 0
s Alouatta_seniculus.k141_117119                             15627 15 +     50774 ----------------------------CTTA----A---A--A-AC--------------------GC-AA------CT
i Alouatta_seniculus.k141_117119                         I 2 C 0
s Ammotragus_lervia.NIVO01071767.1                          676248 20 -   2318259 C-AA---------------------C-ACTTC----A---A--A-AT--------------------GC-AA------CC
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      186113 22 +    412891 C-AG---------------------C-ACTTC----A---AACA-TC--------------------AC-AT------GC
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             98731 17 -    100397 -------------------------C-ACTTC----A---A--A-AT--------------------AC-AA------CC
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aotus_azarae.k141_3104676                                  16616 15 -     33861 ----------------------------TTTA----A---A--A-AC--------------------AC-AA------CT
i Aotus_azarae.k141_3104676                              I 2 C 0
s Aotus_griseimembra.k141_2240599                            16613 15 -     34016 ----------------------------TTTA----A---A--A-AC--------------------GC-AA------CT
i Aotus_griseimembra.k141_2240599                        I 2 C 0
s Aotus_nancymaae.KZ198451.1                               4299040 15 -   5030052 ----------------------------ttta----a---a--a-ac--------------------gC-AA------CT
i Aotus_nancymaae.KZ198451.1                             I 2 C 0
s Aotus_trivirgatus.k141_2152450                             16649 15 -     34685 ----------------------------TTTA----A---A--A-AC--------------------GC-AA------CT
i Aotus_trivirgatus.k141_2152450                         I 2 C 0
s Aotus_vociferans.k141_344750                               29774 15 -     47192 ----------------------------TTTA----A---A--A-AC--------------------GC-AA------CT
i Aotus_vociferans.k141_344750                           I 2 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13370 18 +     20879 ---A---------------------C-ACTTC----A---A--A-AC--------------------AC-TG------CT
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5503 22 +     43469 C-AG---------------------C-CCTTC----A---AATA-TC--------------------AC-AA------GC
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  54456 21 -     92717 A-GA---------------------CTACTAT----T---T--A-CT--------------------GC-AA------TC
i Avahi_laniger.k141_765380                              I 21 C 0
s Avahi_peyrierasi.k141_1424874                              55087 21 +     85213 A-GA---------------------CTACTAT----C---T--A-CT--------------------GC-AA------TC
i Avahi_peyrierasi.k141_1424874                          I 21 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15192477 20 +  23207421 C-AA---------------------C-ACTTC----A---A--A-AT--------------------AC-AA------CC
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2942 20 -     18090 C-AA---------------------C-ACTTC----A---A--A-AT--------------------AC-AA------CC
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    27171 20 +     34529 C-AC---------------------C-ACTTC----A---A--A-AT--------------------GC-AA------CC
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    200227 20 -    288883 C-AA---------------------C-ACTTC----A---A--A-AT--------------------GC-AA------CC
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20273432 20 +  48749331 C-AA---------------------C-ACTTC----A---A--A-AT--------------------GC-AA------CC
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1125988 20 -   1948126 C-AA---------------------C-ACTTC----A---A--A-AT--------------------GC-AA------CC
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18084070 20 +  45695690 C-AA---------------------C-ACTTC----A---A--A-AT--------------------GC-AA------CC
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2819738 20 +   4408762 C-AA---------------------C-ACTTC----A---A--A-AT--------------------GC-AG------CC
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Callibella_humilis.k141_1278103                             6496 20 -     10423 C-AA---------------------C-ACTTA----A---A--A-AT--------------------GC-AA------CT
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callithrix_geoffroyi.k119_69176                              335 20 +      5377 T-AA---------------------C-ACTTA----A---A--A-AC--------------------GC-AA------CT
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592196 20 - 189096842 T-AA---------------------C-ACTTA----A---A--A-AC--------------------GC-AA------CT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1010 20 -     12329 T-AA---------------------C-ACTTA----A---A--A-AC--------------------GC-AA------CT
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10002996 20 -  17673402 C-AA---------------------C-ACTTC----G---A--A-AT--------------------AC-AA------TG
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2335472 20 -   7040546 C-AA---------------------C-ACTTC----G---A--A-AT--------------------AC-AA------CG
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  403769 20 -   1652518 C-AA---------------------C-ACTTC----G---A--A-AT--------------------AC-AA------TG
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17799938 20 -  60362399 C-AA---------------------C-ACTTC----A---A--A-AG--------------------AT-GA------TC
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                      686 20 -     43241 C-AA---------------------C-ACTTC----A---A--A-AG--------------------AT-GA------TC
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9035381 20 -   9314153 C-AA---------------------C-ACTTC----A---A--A-AG--------------------AT-GA------TC
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17959857 20 -  59632846 C-AA---------------------C-ACTTC----A---A--A-AG--------------------AT-GA------TC
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18501154 20 +  63665305 C-AA---------------------C-ACTTC----A---A--A-AG--------------------AT-GA------TC
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18830366 20 +  46296322 C-AA---------------------C-ACTTC----A---A--A-AT--------------------GC-AA------CC
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18061086 20 -  44709034 C-AA---------------------C-ACTTC----A---A--A-AT--------------------GC-AA------CC
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1762 21 -     12242 GGAA---------------------C-ACCTC----A---A--A-AC--------------------AT-GG------CA
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5870 22 -     11696 C-AG---------------------C-ACTTC----A---AACA-TC--------------------AC-AT------GC
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137867 20 +    179628 C-AT---------------------C-ACTTC----A---A--A-AT--------------------AC-AA------CT
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     94293 20 +    217609 C-AA---------------------C-ACTTC----A---A--C-AT--------------------AC-AC------CC
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                         10936 20 -     11392 C-AA---------------------C-ACTTA----A---A--A-AC--------------------GC-AA------CT
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               7120 20 -      7577 C-AA---------------------C-ACTTA----A---A--A-AC--------------------GC-AA------CT
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25653540 20 +  26074798 C-AA---------------------C-ACTTA----T---A--A-AA--------------------GC-AA------CT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                1478 20 +     28840 C-AA---------------------C-ACTTA----T---A--A-AA--------------------GC-AA------CT
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 1203 24 +     14051 C-AA---------------------C-ACTTACTTAT---A--A-AA--------------------GC-AA------CT
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Ceratotherium_simum.JH767749.1                          12232220 20 +  27778364 c-aa---------------------c-atttc----a---a--a-at--------------------ac-aa------cc
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3247 20 -     25243 C-AA---------------------C-ATTTC----A---A--A-AT--------------------AC-AA------CC
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4476457 20 +   4669795 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                         959 20 +     17872 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           1616 20 -     14043 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9649 20 +     27781 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         9817 20 -     20310 T-AA---------------------C-ACTTC----A---G--A-AC--------------------AC-AA------CT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          12797 20 +     29689 T-AA---------------------C-ACTTC----A---G--A-AC--------------------AC-AA------CT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7543 20 -     20078 T-AA---------------------C-ACTTC----A---A--A-AC--------------------AC-AA------CT
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          15465 20 -     27936 T-AA---------------------C-ACTTC----A---G--A-AC--------------------AC-AA------CT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            4331 20 -     17152 T-AA---------------------C-ACTTC----A---A--A-AC--------------------AC-AA------CT
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38817876 20 +  39242232 T-AA---------------------C-ACTTC----A---G--A-AC--------------------AC-AA------CT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223565 20 -  21565898 T-AA---------------------C-ACTTC----A---A--A-AC--------------------AC-AA------CT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40684 20 -     53127 T-AA---------------------C-ACTTC----A---A--A-AC--------------------AC-AA------CT
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                         935 20 +     13442 T-AA---------------------C-ACTTC----A---G--A-AC--------------------AC-AA------CT
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15484 20 -     27947 T-AA---------------------C-ACTTC----A---A--A-AC--------------------AC-AA------CT
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         15460 20 +     17596 T-AA---------------------C-ACTTC----A---A--A-AC--------------------AC-AA------CT
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          1503 20 +     14005 T-AA---------------------C-ACTTC----A---A--A-AC--------------------AC-AA------CT
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1249 20 -      8501 C-AA---------------------T-GTTTC----A---A--A-AC--------------------AT-GA------CC
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             21834 20 -     52598 T-GA---------------------C-ACTTC----A---A--A-AC--------------------AC-AA------CT
i Cheirogaleus_major.k141_333249                         I 21 C 0
s Cheirogaleus_medius.k141_1055463                           17205 20 +     57038 T-GA---------------------C-ACTTC----A---A--A-AC--------------------AC-AA------CT
i Cheirogaleus_medius.k141_1055463                       I 21 C 0
s Chinchilla_lanigera.JH722012.1                           1253636 23 +   2543920 agaa---------------------c-aCTTC----A---A--A-AC---A-C--------------AG-TG------CA
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18429444 20 -  18827391 T-AA---------------------C-ACTTC----A---G--A-AC--------------------AC-AA------TT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15880 20 -     50209 T-AA---------------------C-ACTTC----A---G--A-AC--------------------AC-AA------TT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422881 20 + 135778131 T-AA---------------------C-ACTTC----A---G--A-AC--------------------AC-AA------TT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 19064 20 +     19366 T-AA---------------------C-ACTTC----A---A--A-AC--------------------AC-AA------TC
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            174139 20 +    839153 T-AA---------------------C-GCTTC----A---A--A-AC--------------------AC-AA------TC
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1911357 20 +   2368649 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949609 20 + 200372422 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37891 20 +     84244 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17548809 20 -  53390261 C-AA---------------------T-ATTAC----A---A--A-AT--------------------AC-AA------TA
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1228 20 +     23735 T-AA---------------------C-ACTTC----A---A--A-AT--------------------TC-AA------CT
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      I 2 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 50788 20 +     63868 C-AA---------------------T-GTGTT----A---A--A-AT--------------------GC-AA------CT
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11668301 20 + 224834208 C-AA---------------------T-GTGTT----A---A--A-AT--------------------GC-AA------CT
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               3714 21 -     19598 A-AA---------------------C-ACTGC----A---T--G-AT--------------------ACCAA------TC
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29260 20 -     87169 C-AA---------------------C-ACTTC----A---A--A-AT--------------------AC-AA------CC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837843 19 +   1526836 --AA---------------------C-ACTTC----C---A--A-AT--------------------GC-AG------CT
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 15 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  36630 22 +     51376 AGAA---------------------C-ACCTC----A---A--ACAC--------------------AG-TG------TA
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            64267 20 +   2246927 C-AA---------------------C-ACTTC----A---A--A-AC--------------------AC-AA------CC
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12538037 20 -  12879189 T-GA---------------------C-ACTTC----A---A--A-AC--------------------GC-GA------CC
i Daubentonia_madagascariensis.ctg71                     I 21 C 0
s Delphinapterus_leucas.KZ290073.1                        16812113 20 +  35494412 C-AA---------------------C-ACTTC----A---A--A-AT--------------------AC-AA------CC
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630866 22 +  20541912 C-AG---------------------C-ACTTC----A---GACA-TC--------------------AC-AT------GC
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  674069 20 +   1390856 c-aa---------------------c-atttc----a---a--a-at--------------------ac-aa------cc
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6820 20 +    198055 c-aa---------------------c-atttc----a---a--a-at--------------------ac-aa------cc
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37114 23 +     67921 AGAA---------------------C-ACTCC----A---A--A-AC---A-C--------------AG-CG------CA
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Echinops_telfairi.JH980293.1                            48781328 20 + 111700974 A-AA---------------------C-ACTTC----A---A--A-AC--------------------AT-AA------TC
i Echinops_telfairi.JH980293.1                           C 0 I 1
s Eidolon_helvum.KE759718.1                                  11293 20 +     11740 T-AA---------------------C-ACTTC----A---A--A-AT--------------------AC-AA------CC
i Eidolon_helvum.KE759718.1                              I 2 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       311403 20 +    607251 C-AA---------------------C-ACTTC----A---A--A-AT--------------------AC-AA------CC
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1098489 20 +  10337057 C-AT---------------------A-ATTTC----A---A--A-AC--------------------CT-AG------TT
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          21270 20 -    110024 C-AA---------------------T-GTGTT----A---A--A-AT--------------------GC-AG------CT
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                            1176 20 +      8657 C-AA---------------------G-GTATT----A---A--A-AT--------------------GC-AG------CT
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16330073 20 -  41312741 C-AA---------------------C-ATTTC----A---A--A-AT--------------------AC-AA------GC
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2146482 22 -  14770903 C-AA---------------------C-ACTTC----A---AATA-TA--------------------TC-AC------AC
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1284329 20 +   4378816 C-AA---------------------C-ACTTC----A---A--A-AT--------------------AC-AA------CC
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18532149 20 -  39960074 C-AA---------------------C-ACTTC----A---A--A-AT--------------------AC-AA------CC
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               34178 20 +    498745 C-AA---------------------C-ACTTC----A---A--A-AT--------------------AC-AA------CC
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3329021 30 -   7059049 C--AGAATACTTCCAATTACAGGCAC-TCTAA----A-------------------------------------------
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21206049 20 -  21539334 T-AA---------------------C-ACTTC----A---A--A-AC--------------------AC-AA------CT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11789 20 +    133382 C-AA---------------------C-ACTTC----A---A--A-AT--------------------AC-AA------CC
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             25726 20 -     44125 C-AA---------------------C-ACTTC----A---A--A-AT--------------------AC-AA------CC
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Eulemur_albifrons.k141_576796                              40880 20 -     44621 C-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CC
i Eulemur_albifrons.k141_576796                          I 21 C 0
s Eulemur_collaris.k141_377015                                7261 20 -     16928 C-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CC
i Eulemur_collaris.k141_377015                           I 21 C 0
s Eulemur_coronatus.k141_885031                              16293 20 -     25546 C-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CC
i Eulemur_coronatus.k141_885031                          I 21 C 0
s Eulemur_flavifrons.k141_1184614                            13489 20 +     26330 C-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CC
i Eulemur_flavifrons.k141_1184614                        I 21 C 0
s Eulemur_fulvus.k141_544389                                 14724 20 +     23973 C-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CC
i Eulemur_fulvus.k141_544389                             I 21 C 0
s Eulemur_macaco.k141_1562045                                13486 20 +     75513 C-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CC
i Eulemur_macaco.k141_1562045                            I 21 C 0
s Eulemur_mongoz.k141_232305                                 11416 20 +     97555 T-AA---------------------C-ACTTC----A---A--A-AC--------------------AC-AA------CC
i Eulemur_mongoz.k141_232305                             I 21 C 0
s Eulemur_rubriventer.k141_774594                              908 20 +     13026 C-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CC
i Eulemur_rubriventer.k141_774594                        I 21 C 0
s Eulemur_rufus.k141_1476633                                  4960 20 -     17153 C-AA---------------------C-ACTTC----A---A--A-AT--------------------GC-AA------CC
i Eulemur_rufus.k141_1476633                             I 21 C 0
s Eulemur_sanfordi.k141_1122526                              14533 20 +    111500 C-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CC
i Eulemur_sanfordi.k141_1122526                          I 21 C 0
s Felis_catus.CM001381.2                                  20237715 20 + 206538554 C-AA---------------------C-ACTTC----A---A--A-AT--------------------AC-AA------CT
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20196558 20 + 205367284 C-AA---------------------C-ACTTC----A---A--A-AT--------------------AC-AA------CT
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 10311 20 -     36744 C-AA---------------------C-ACTTC----A---A--A-AT--------------------AC-AA------CT
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             851164 23 +   3816255 AGAA---------------------C-ACTGC----A---A--A-AC-GC-----------------AA-CA------CA
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg2040                                     427354 26 -    453645 T-GA---------------------C-ACTTT----A---A--A-AT--------------------GC-AAGCCCTCCC
i Galago_moholi.ctg2040                                  I 21 I 4
s Galago_senegalensis.k141_631886                             5044 26 +     11339 T-GA---------------------C-ACTTT----A---A--A-AT--------------------GC-AAGCCCTCCC
i Galago_senegalensis.k141_631886                        I 21 I 4
s Galagoides_demidoff.k141_1711393                            2342 26 +     41679 T-GA---------------------C-ACTTC----A---A--A-AT--------------------GC-AAGCCCTCCC
i Galagoides_demidoff.k141_1711393                       I 21 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1963 20 -      9135 C-AA---------------------C-ACTTC----A---A--A-AC--------------------AC-AA------CT
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     609368 20 -    660261 C-AA---------------------C-ACTTC----A---A--A-AT--------------------AC-AA------CC
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Gorilla_beringei.k141_3596273                              16848 20 -     32273 C-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186338984 20 + 186649187 C-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33376 19 +     78134 --AA---------------------C-ACTTC----A---A--A-AC--------------------AA-AA------CT
i Graphiurus_murinus.GraMur_scaffold_10447               I 1 C 0
s Hapalemur_alaotrensis.k141_170648                           7588 20 -     19426 C-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CC
i Hapalemur_alaotrensis.k141_170648                      I 21 C 0
s Hapalemur_gilberti.k141_488810                             12741 20 -     15286 C-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CC
i Hapalemur_gilberti.k141_488810                         I 21 C 0
s Hapalemur_griseus.k141_1511508                             14380 20 +     18253 C-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CC
i Hapalemur_griseus.k141_1511508                         I 21 C 0
s Hapalemur_meridionalis.k141_248335                         14481 20 -     41752 C-AA---------------------C-ACTTC----A---A--A-AT--------------------GC-AA------CC
i Hapalemur_meridionalis.k141_248335                     I 21 C 0
s Hapalemur_occidentalis.k141_907772                         14318 20 -     16460 C-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CC
i Hapalemur_occidentalis.k141_907772                     I 21 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243098 20 +    327341 C-CA---------------------C-ACTTC----A---A--A-AT--------------------AC-AA------CC
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18572 20 +     36099 C-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CC
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20662922 23 +  22651954 AGAA---------------------C-ACTGC----A---A--A-AC---A-C--------------AA-CA------CA
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1659 20 +      7595 T-AA---------------------C-ACTTC----A---A--A-AC--------------------AC-AA------TC
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       111254 20 +   1711038 T-AA---------------------C-ACTTC----A---A--A-AG--------------------TC-AA------CT
i Hipposideros_armiger.JXIK01000431.1                    I 2 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               42685 20 +     43066 T-AG---------------------C-ACTTC----A---A--A-AT--------------------TC-AA------CT
i Hipposideros_galeritus.HipGal_scaffold_29171           I 2 C 0
s Hoolock_leuconedys.ctg274                                    435649 20 +    630532 C-AA---------------------C-ACTTC----A---A--A-AT--------------------GC-AA------CT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45800 20 +     55795 C-AA---------------------C-ACTTC----A---G--A-GT--------------------AC-AA------TC
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83819 21 +    135385 AGAA---------------------C-ACTTC----A---A--A-AC--------------------AA-CT------CA
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7521651 19 -   7955117 --AA---------------------C-ACTTT----A---A--A-AC--------------------AC-AG------CT
i Ictidomys_tridecemlineatus.JH393364.1                  I 1 C 0
s Indri_indri.k141_3655594                                   23279 20 +     31101 C-AA---------------------C-ACTTC----A---A--A-AC--------------------AC-AA------CC
i Indri_indri.k141_3655594                               I 21 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               23330 20 +     23964 C-AA---------------------C-ACTTC----A---A--A-AT--------------------AC-AA------CC
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8277669 20 -   9596543 T-AC---------------------C-ATGTC----A---A--A-AC--------------------AT-AA------ct
i Jaculus_jaculus.JH725527.1                             C 0 I 240
s Kogia_breviceps.KogBre_flattened_line_192630                2687 20 -      3359 C-AA---------------------C-ACTTC----A---A--A-AT--------------------AC-AA------CC
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    17132 22 -     42476 C-AA---------------------C-ACTTC----A---AATA-CA--------------------AC-AC------AC
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15524833 20 -  30322482 C-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CC
i Lemur_catta.scaffold_24                                I 21 C 0
s Leontocebus_fuscicollis.k141_1820339                        8774 20 +     64341 C-AA---------------------C-ACTTA----A---A--A-AC--------------------AC-AA------CT
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           1114 20 -     35062 C-AA---------------------C-ACTTA----A---A--A-AC--------------------AC-AA------CT
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        8801 20 +     35603 C-AA---------------------C-ACTTA----A---A--A-AC--------------------AC-AA------CT
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    30414 20 +     38576 C-AA---------------------C-ACTTA----A---A--A-AC--------------------GC-AA------CC
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         27118 20 +     66356 C-AA---------------------C-ACTTA----A---A--A-AC--------------------GC-AA------CC
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         11712 31 -     23766 ------------------------------------A---A--C-ACTTCAACACTTCAAAATTCAAAC-AC------TC
i Lepilemur_ankaranensis.k141_596936                     I 22 C 0
s Lepilemur_dorsalis.k141_577674                             29773 23 +     45836 ------------------------------------A---A--C-ACTTCAA-A----A---TTCAAAC-AC------TC
i Lepilemur_dorsalis.k141_577674                         I 22 C 0
s Lepilemur_ruficaudatus.k141_121139                          2310 32 +     25010 G-AA---------------------C-ACTTC----A---A--C-ACTTCAA-A----A---TTCAAAC-AC------TC
i Lepilemur_ruficaudatus.k141_121139                     I 21 C 0
s Lepilemur_septentrionalis.k141_185316                      27705 31 +     54090 ------------------------------------A---A--C-ACTTCAACACTTCAAAATTCAAAC-AC------TC
i Lepilemur_septentrionalis.k141_185316                  I 22 C 0
s Leptonychotes_weddellii.KB714746.1                       3043820  9 +   3914936 C-AA---------------------C-ACTTC------------------------------------------------
i Leptonychotes_weddellii.KB714746.1                     C 0 I 11
s Lepus_americanus.LepAme_scaffold_107385                     7246  6 -     14121 T--T---------------------A-ACT--------------------------------------------------
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 2
s Lipotes_vexillifer.KE559953.1                             268381 20 -    662738 C-AA---------------------C-ACTTC----A---A--A-AT--------------------AC-AA------CC
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1438000 20 +   1826925 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            6602 22 +     11245 T-GA---------------------C-ACTTC----A---A--A-AT--------------------GC-AAG---T-CC
i Loris_lydekkerianus.k141_2539221                       I 21 C 0
s Loris_tardigradus.ctg83                                  1005423 22 +   6120653 T-GA---------------------C-ACTTC----A---A--A-AT--------------------GC-AAG---T-CC
i Loris_tardigradus.ctg83                                I 21 C 0
s Loxodonta_africana.GL010049.1                            4218116 20 -  43346337 T-AA---------------------C-ACTTC----A---A--A-AT--------------------AC-AA------TC
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17956097 20 -  59628241 C-AA---------------------C-ACTTC----A---A--A-AG--------------------AT-GA------TC
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               7815 20 +     40492 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59677074 20 +  60120075 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13590 20 -     26193 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            81374 20 -    114318 T-AA---------------------C-ACTTC----A---A--A-AC--------------------AC-AA------CT
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  7061 20 -     23192 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16534 20 -     29190 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  25099 20 +     37952 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186840188 20 + 187317192 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458751 20 -  25927173 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  80947 20 +     89720 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 7948 20 +     20474 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   7748 20 -     14993 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  330614 20 -    668171 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 6061 20 -     24072 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26686 20 -     45290 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91387 20 +     94391 T-AA---------------------T-ACTTC----A---A--A-AT--------------------AC-AA------CC
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 2 C 0
s Mandrillus_leucophaeus.scaffold280                      23938277 20 -  24302211 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352399 20 +    752769 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              19006 20 +    737560 C-AA---------------------C-CCCTC----A---A--A-AC--------------------AC-AC------CC
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              50992 20 -    317179 C-AA---------------------C-CCCTC----A---A--A-AC--------------------AC-AC------CC
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33103846 19 -  40650429 --AA---------------------C-ACTTT----A---A--A-AC--------------------AC-AG------CT
i Marmota_marmota.CZRN01000018.1                         I 1 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        14122 20 -    207569 T-AA---------------------C-ACTTT----G---A--A-AT--------------------TC-AA------CC
i Megaderma_lyra.MegLyr_scaffold_4542                    I 2 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10813 20 +     13704 C-AA---------------------C-ATTTC----A---A--A-AT--------------------AC-AA------CC
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 33497 20 +    140813 C-AA---------------------T-GTGTT----A---A--A-AT--------------------GC-AA------CT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12182963 20 -  29670104 C-AA---------------------T-GTGTT----A---A--A-AT--------------------GC-AA------CT
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    3998 20 +     10310 C-AA---------------------C-ACTTC----A---A--A-AT--------------------AC-AA------CC
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Mico_argentatus.k141_1239457                                6932 20 -      7380 C-AA---------------------C-ACTTA----A---A--A-AT--------------------GC-AA------CT
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_schneideri.k141_1950671                                      6905 20 -      7356 C-AA---------------------C-ACTTA----A---A--A-AT--------------------GC-AA------CT
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18292260 20 -  93316391 T-GA---------------------C-ACTTC----A---A--A-AT--------------------GC-AA------CT
i Microcebus_murinus.CM007674.1                          I 21 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    23208 20 -    145209 T-AA---------------------C-ATTTC----A---A--A-AC--------------------AT-AA------TC
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 1
s Micronycteris_hirsuta.MicHir_scaffold_52381                16407 22 -     19307 C-AG---------------------C-CCTTC----A---AACA-TC--------------------AC-AT------GC
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11261249 20 -  27267610 C-AA---------------------T-GTGTT----A---A--A-AT--------------------GC-AA------CT
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1851363 22 +   8254450 C-AA---------------------C-ACCTC----A---AACA-TA--------------------AC-AC------GC
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             35043 22 +     64694 C-AA---------------------C-ACCTC----A---AACA-TA--------------------AC-AC------GC
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                           9983 20 -     28506 T-AA---------------------C-ACTTC----A---A--A-AC--------------------AC-AA------CT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6688 17 -      8324 -------------------------C-ACTTC----C---A--A-AT--------------------AC-AA------CC
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      9804 20 -     37649 C-GA---------------------C-ACTTC----A---A--A-AC--------------------AC-AA------CT
i Mirza_zaza.k141_952172                                 I 21 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    27503 20 -    437263 C-AA---------------------C-ACTTC----A---A--A-AT--------------------AC-AA------CC
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142407 22 -    366855 C-AG---------------------C-ACTTC----A---AACA-TA--------------------AC-AT------AC
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   1448 20 +     82753 C-AA---------------------C-ACTTC----A---A--A-AT--------------------GC-AA------GC
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   36198 20 +     37127 C-CA---------------------C-ACTTC----A---A--A-AT--------------------AC-AA------CC
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           7590 11 +     14753 C-AA---------------------C-ACTTC----A---A---------------------------------------
i Murina_feae.MurFea_scaffold_85699                      C 0 I 6
s Mus_caroli.LT608237.1                                   84362111 20 - 120012414 C-AA---------------------T-GTGTT----A---A--A-AT--------------------GT-AC------CT
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87651104 20 - 129401213 C-AA---------------------T-GTGTT----A---A--A-AT--------------------GT-AC------CT
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31355761 20 -  89631738 C-AA---------------------T-GTGTT----A---A--A-AT--------------------AT-AC------CT
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90753167 20 - 130317789 C-AA---------------------T-GTGTT----A---A--A-AT--------------------GT-AT------CT
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               302225 20 -  14710649 C-AA---------------------C-ATTTC----A---A--A-AT--------------------AC-AA------CC
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71950 21 -     80779 AGAA---------------------C-ACCTC----A---A--A-AC--------------------AA-TG------CA
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                281225 22 -  10118263 C-AA---------------------C-ACTTC----A---AATA-TA--------------------AC-AC------AC
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1588481 22 -   6019432 C-AA---------------------C-ACTTC----A---AATA-TA--------------------AC-AC------AC
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3904581 18 -   4330536 ---------------------------ACTTC----A---AATA-TA--------------------AC-AC------AC
i Myotis_lucifugus.GL429869.1                            I 3 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                         728 22 +      1835 C-AA---------------------C-ACTTC----A---AATA-TA--------------------AC-AC------AC
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190006 20 +    196477 T-GA---------------------T-ATCTC----A---A--A-AC--------------------AC-AG------CC
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2034809 20 -   3037898 C-AG---------------------C-ATGTT----A---A--A-AT--------------------GC-AT------CT
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               15985 20 +     21681 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308274 20 +  31847680 C-AA---------------------C-ACTTC----C---A--A-AT--------------------AC-AA------CC
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5866459 20 +   7148211 C-AA---------------------C-ACTTC----A---A--G-AT--------------------AC-AA------CC
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    758642 10 +    783361 T-AG---------------------C-ACTTC----C-------------------------------------------
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 10
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150160 20 -   9404916 C-AA---------------------C-ACTTC----A---A--A-AG--------------------AT-GA------TC
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102586967 22 - 196305487 T-GA---------------------C-ACTTC----A---A--A-AT--------------------GC-AAG---T-CC
i Nycticebus_bengalensis.LG01                            I 21 C 0
s Nycticebus_coucang.k141_1127096                              891 22 +      2075 T-GA---------------------C-ACTTC----A---A--A-AT--------------------GC-AAG---T-CC
i Nycticebus_coucang.k141_1127096                        I 21 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105762322 22 + 199412804 T-GA---------------------C-ACTTC----A---A--A-AT--------------------GC-AAG---T-CC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 21 C 0
s Ochotona_princeps.JH802162.1                             1364619 12 +   3988456 ----------------------------------------T--A-AC--------------------AG-ATG---T-CA
i Ochotona_princeps.JH802162.1                           I 17 C 0
s Odobenus_rosmarus.KB229312.1                              507416 20 -   2017862 C-AA---------------------T-ACTTC----A---A--A-AT--------------------AC-AA------CC
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          77285 20 -    150152 C-AA---------------------C-ACTTC----A---A--A-AT--------------------AC-AA------CC
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   25902 21 +     28053 C-AG---------------------T-GTGGT----A--AA--A-AT--------------------GC-AA------CT
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    80941 18 +    102263 C-AA---------------------T---GTT----A---A--A-AT--------------------GC-AA------CT
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2782382 20 -  10937097 C-AA---------------------C-ACTTC----A---A--A-AT--------------------AC-AA------CC
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387              10877 20 -     18566 A-AA---------------------C-ACTTC----A---A--A-AT--------------------AC-AG------TC
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67148107  4 + 174332312 -------------------------A-ACT--------------------------------------------------
i Oryctolagus_cuniculus.CM000791.1                       I 1 I 2
s Otocyon_megalotis.JAEUCK010005147.1                       463109 20 -    559221 A-AA---------------------C-ACCTC----A---A--A-AG--------------------AT-GA------TC
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4874 26 +      8798 T-GA---------------------C-ACTTC----A---A--A-AT--------------------GC-AAGCCCTCCC
i Otolemur_crassicaudatus.k141_222918                    I 21 C 0
s Otolemur_garnettii.GL873799.1                             697037 26 -   1103335 T-GA---------------------C-ACTTC----A---A--A-AT--------------------GC-AAGCCCTCCC
i Otolemur_garnettii.GL873799.1                          I 21 C 0
s Ovis_aries.CM001607.2                                   17586547 20 +  44047080 C-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CC
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      174524 20 -    191736 C-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CC
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    44936 20 +     80009 C-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189143835 20 + 189151597 C-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Pan_troglodytes.CM009242.2                             C 0 I 18
s Panthera_onca.PanOnc_flattened_line_3271                  151919 20 +    230217 C-AA---------------------C-ACTTC----A---A--A-AT--------------------AC-GA------CT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                265128 20 +  18783137 C-AA---------------------C-ACTTC----A---A--A-AT--------------------AC-GA------Ct
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4722008 20 -   8748460 C-AA---------------------C-ACTTC----A---A--A-AT--------------------AC-AA------Ct
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1265441 20 -   2937107 C-AA---------------------C-ACTTC----A---A--A-AT--------------------GC-AA------CC
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183444077 20 + 183742232 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7723 20 +     20448 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20564535 20 +  20919399 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6467 20 +     41871 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     9760 20 +     27711 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                   757 20 -     11374 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13420 20 -     78924 C-AA---------------------C-ACTTC----A---A--A-AT--------------------AC-AA------CC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10861 23 +     13100 T-AA---------------------C-ACTTC----A---A--A-AT--------------------GC-AAG--GT-CC
i Perodicticus_ibeanus.k141_855320                       I 21 C 0
s Perodicticus_potto.k141_1092580                             9255 23 +     25941 T-AA---------------------C-ACTTC----A---A--A-AT--------------------GC-AAG--GT-CC
i Perodicticus_potto.k141_1092580                        I 21 C 0
s Peromyscus_maniculatus.KI615324.1                       18195521 18 -  18517816 C-AA---------------------T---GTT----A---A--A-AT--------------------GC-AA------CT
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28832 23 -     29689 AGAA---------------------C-CCTGC----A---A--A-AC---A-C--------------AA-TG------CA
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               9421 20 +     63832 C-AA---------------------C-ACTTC----A---A--G-AT--------------------AC-AA------CC
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           44476 20 +     62158 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        39223 20 +     89929 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40639 20 +     51399 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296878 20 -  14605196 t-aa---------------------c-acttc----A---A--A-AT--------------------GC-AA------CT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2519 21 +     22620 --AA---------------------C-ACTTC----A---AATA-TA--------------------AC-AC------AG
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 16 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           35127 20 +     35617 C-AA---------------------C-ACTTC----A---A--A-AT--------------------AC-AA------CC
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189131980 20 + 189387572 C-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9571587 20 +   9816681 C-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               74160 20 -     81375 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              5981 20 +     19060 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 14114 20 -     22811 T-AA---------------------C-ACTTC----A---A--A-AC--------------------AC-AA------TC
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2597513 20 -   4620579 C-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CC
i Prolemur_simus.MPIZ01000396.1                          I 21 C 0
s Propithecus_coquerelli.NW_012148875.1                     991500 20 +   2598838 A-GA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------TC
i Propithecus_coquerelli.NW_012148875.1                  I 21 C 0
s Propithecus_coronatus.k141_347390                          29812 20 +     38485 A-GA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------TC
i Propithecus_coronatus.k141_347390                      I 21 C 0
s Propithecus_diadema.k141_58108                              1854 20 -     13098 A-GA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------TC
i Propithecus_diadema.k141_58108                         I 21 C 0
s Propithecus_edwardsi.k141_1176054                          27333 20 +     35766 A-GA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------TC
i Propithecus_edwardsi.k141_1176054                      I 21 C 0
s Propithecus_perrieri.k141_1200571                           5520 20 -     24134 A-GA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------TC
i Propithecus_perrieri.k141_1200571                      I 21 C 0
s Propithecus_tattersalli.k141_790011                        29345 20 -     67325 A-GA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------TC
i Propithecus_tattersalli.k141_790011                    I 21 C 0
s Propithecus_verreauxi.k141_956661                           5568 20 -      6182 A-GA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------TC
i Propithecus_verreauxi.k141_956661                      I 21 C 0
s Psammomys_obesus.NESX01036370.1                            11143 20 -     21651 C-AA---------------------T-GTGTT----A---A--A-AT--------------------GC-AA------CT
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            15916 22 -     21811 C-AG---------------------C-ACTTT----A---TAGA-TC--------------------AC-AT------GC
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41008 20 +     42204 C-AA---------------------C-ATTTC----A---A--A-AT--------------------AC-AA------CC
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22977533 20 +  28871421 T-AA---------------------C-ACTAC----A---A--A-AT--------------------AC-AA------CC
i Pteropus_alecto.KB030862.1                             I 2 C 0
s Pteropus_vampyrus.KN534172.1                                7586 20 -      8028 T-AA---------------------C-ACTTC----A---A--A-AT--------------------AC-AA------CC
i Pteropus_vampyrus.KN534172.1                           I 2 C 0
s Puma_concolor.QAVW01001104.1                            20275080 20 -  38429054 C-AA---------------------C-ACTTC----A---A--A-AT--------------------AC-AA------Ct
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15967 20 -     91421 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-CA------CT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7610087 20 +   7812017 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             15966 20 -     72585 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6024 20 +     55207 C-AA---------------------C-ACTTC----A---A--A-AT--------------------AC-AA------cc
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53571359 20 +  90668790 C-AA---------------------T-GTGTT----A---A--A-AT--------------------GT-AC------CT
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        367742 20 -   3329780 T-AA---------------------C-ACTTC----A---A--A-AT--------------------TC-AA------CT
i Rhinolophus_sinicus.LVEH01000134.1                     I 2 C 0
s Rhinopithecus_bieti.k119_217274                             7677 20 -     11128 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91237026 20 - 195417433 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672682 20 +   7961872 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88570 20 -     96226 T-AA---------------------C-ACTTC----A---A--A-AT--------------------AC-AA------CC
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 20 C 0
s Saguinus_bicolor.k141_8081                                  2090 20 +     42994 C-AA---------------------C-ACTTA----A---A--A-AC--------------------AC-AA------CT
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                              783 20 +      2253 C-AA---------------------C-ACTTA----A---A--A-AC--------------------AC-AA------CT
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               1212 20 -      8737 C-AA---------------------C-ACTTA----A---A--A-AC--------------------AC-AA------CT
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                               865 20 +      2343 C-AA---------------------C-ACTTA----A---A--A-AC--------------------AC-AA------CT
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209475744 20 + 209938924 C-AA---------------------C-ACTTA----A---A--A-AC--------------------AC-AT------CT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                 188 20 -      7576 C-AA---------------------C-ACTTA----A---A--A-AC--------------------AC-AA------CT
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951812 20 - 121099817 C-AA---------------------C-ACGTA----A---A--A-AC--------------------GC-AA------CT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24154 20 +     46362 C-AA---------------------C-ACGTA----A---A--A-AC--------------------GC-AA------CT
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               24249 20 +     45824 C-AA---------------------C-ACGTA----A---A--A-AC--------------------GC-AA------CT
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             40928 20 -     64574 C-AA---------------------C-ACTTA----A---A--A-AC--------------------GC-AA------CT
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4001 20 -     23631 C-AA---------------------C-ACGTA----A---A--A-AC--------------------GC-AA------CT
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 24145 20 -     61129 C-AA---------------------C-ACGTA----A---A--A-AC--------------------GC-AA------CT
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5421494 20 -   5703754 C-AA---------------------C-ACTTA----T---A--A-AA--------------------GC-AA------CT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          56735 20 -     80660 C-AA---------------------C-ACTTA----T---A--A-AA--------------------GC-AA------CT
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153953 20 -    313613 C-AA---------------------C-ACTAT----G---A--A-AT--------------------AA-AG------TA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                          858 20 -     12572 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27708 20 +     39453 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            8226 20 +     27826 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             7748 20 -     19483 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      1049 20 -     12762 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                            910 20 +     13763 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     1052 20 -     30804 C-AG---------------------T-GTGTT----A---A--A-CT--------------------GC-AT------CT
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               4514 20 +   1910179 T-AA---------------------C-ACTTA----A---T--A-GT--------------------AC-AA------TC
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13651754 24 -  18376816 a-ta---------------------c-atttc----aaagt--a-AT--------------------ACCAA------TC
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1954704 19 -   3870691 --AA---------------------A-ACTTT----A---A--A-AC--------------------AC-AG------CT
i Spermophilus_dauricus.KZ294078.1                       I 1 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             31498 20 +     97271 C-AA---------------------C-ACTTC----A---A--A-AT--------------------AC-AA------CC
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              19100 20 -    196729 C-CA---------------------C-ACTTC----A---A--A-AT--------------------AC-AA------CC
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6812036 20 +  69701581 C-AA---------------------C-ACTTC----A---A--A-AT--------------------AC-AA------CC
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                11569 22 +     41958 T-AA---------------------C-ACTTC----A---AATA-TA--------------------AC-AC------AC
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73365 20 +    116680 T-AA---------------------T-ACCTC----A---A--A-GC--------------------AC-AG------CC
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      119540  9 -    156842 -------------------------------------------A-AT--------------------AC-AA------CG
i Tapirus_indicus.TapInd_scaffold_9301                   I 16 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    388002 20 +    539355 C-AA---------------------T-ACTTC----A---C--A-AT--------------------AC-AA------CG
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Theropithecus_gelada.CM009954.1                        186429395 20 + 186847797 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106136 11 +    114563 AGAA---------------------C-ACCGA----A-------------------------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 5
s Tolypeutes_matacus.TolMat_scaffold_228639                   7139 20 +      8208 C-AA---------------------T-GTTAC----A---A--A-AC--------------------AC-AA------CC
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81963 22 +    610378 C-AG---------------------C-ACTTC----A---AACA-CC--------------------AC-AT------GA
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         11799 20 -     20410 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                       913 20 -     12674 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       11900 20 +     19930 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       8311 20 -     19997 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48450 20 -     60166 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        15922 20 -     27529 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     15866 20 -     18194 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9578 20 -     21137 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    8281 20 -     10723 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7453 20 +      9834 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        25766 20 +     32220 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5939868 20 +   6242583 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        9119 20 +     20839 T-AA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                   1696 20 -      1748 C-AA---------------------C-GCTTC----A---A--A-AT--------------------TC-AA------CC
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 C 0
s Trichechus_manatus.JH594705.1                            4294021 11 +  10818551 G-AA---------------------C-ACTTC----A---A---------------------------------------
i Trichechus_manatus.JH594705.1                          C 0 I 8
s Tupaia_chinensis.KB320699.1                              2156565  4 +   4065304 C--A---------------------T-A----------------------------------------------------
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                    10008  4 -     10553 C--A---------------------T-A----------------------------------------------------
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15738621 20 +  33153633 C-AA---------------------C-ACTTC----A---A--A-AT--------------------AC-AA------CC
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54063  9 -     77625 C-AC---------------------C-ACTAC------------------------------------------------
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4851209 20 -   5085361 C-AA---------------------C-ACTTC----A---A--A-AT--------------------AC-AA------CC
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  12178 20 +     50397 T-GA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CC
i Varecia_rubra.k141_590885                              I 21 C 0
s Varecia_variegata.k141_1128296                             12237 20 +     24756 T-GA---------------------C-ACTTC----A---A--A-AC--------------------GC-AA------CC
i Varecia_variegata.k141_1128296                         I 21 C 0
s Vicugna_pacos.KN270157.1                                 5372529 20 -   5488506 C-AA---------------------C-ACTTT----G---A--A-AT--------------------AC-AA------CG
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 11560 20 -     43706 C-AA---------------------C-ACTTC----A---A--A-AG--------------------AT-GA------TC
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          1837 19 +    224448 --GA---------------------C-ACTTC----A---A--A-AC--------------------AC-AG------CT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      15638 20 +     63895 T-CA---------------------T-ATGTC----A---A--A-AC--------------------AT-AA------CT
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            12313 20 +     12536 C-AA---------------------C-ACTTC----A---A--A-AT--------------------AC-AA------CC
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 C 0
e Chiropotes_albinasus.k141_2206961                           1651 303 -     15524 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Tarsius_wallacei.k141_254427                                1877  3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080  3 +     70052 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Glis_glis.GliGli_scaffold_19807                            32063  0 +     49224 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cephalopachus_bancanus.k141_1423433                         6085  3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Carlito_syrichta.NW_007259797.1                           156587  3 -    496798 I
e Arctocebus_calabarensis.k141_2318572                       12167  0 +     14667 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       7613 19 +     62944 CA-----CT--A--TTGCCACAAT----T---TT-G
s Acinonyx_jubatus.LLWD01001279.1                           828093 19 -   1699592 c-----att--a--tttccaaaat----t---tt-g
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     71568 19 +     87051 C-AC----T--G--TCTCTAAAGT----T---TT-G
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511368 19 -  29979442 C-A----GT--A--TCTCCAAAAT----T---CT-G
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             80103 19 -    347723 C-A----TT--A--TCCCCaaaat----t---ct-g
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     75275 19 -     89534 C-AC----T--A--TCTCTCAAAC----T---GT-G
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   15542 19 -     52922 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15462 19 -     28001 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          5960 19 -     18505 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           6812 19 -     12518 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              8389 15 +     51355 -----------A--TCTCCAAAAT----T---TT-G
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                1498 15 -     36483 -----------G--TCTCCAAAAT----T---TT-G
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              11950 15 +     28687 -----------A--TCTCCAAAAT----T---TT-G
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                  463 15 +     27940 -----------A--TCTCCAAAAT----T---TT-G
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            1507 15 -      9457 -----------A--TCTCCAAAAT----G---TT-G
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                              463 15 +     30492 -----------A--TCTCCAAAAT----G---TT-G
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              4458 15 +     47717 -----------A--TCTCCAAGAT----T---TT-G
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              1190 15 +      5663 -----------A--TCTCCAAAAT----T---TT-G
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             15642 15 +     50774 -----------A--TCTCCAAAAT----T---TT-G
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          676268 19 -   2318259 C-A----CT--A--TCTCCACAAC----T---GT-G
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      186135 19 +    412891 A-A----AT--G--TCTCCAAAAT----T---TT-G
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             98748 19 -    100397 T-A----CT--A--TCTGCACAAC----G---GT-G
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aotus_azarae.k141_3104676                                  16631 15 -     33861 -----------G--TCTCCAAAAT----T---TT-G
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            16628 15 -     34016 -----------G--TCTCCAAAAT----T---TT-G
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299055 15 -   5030052 -----------G--TCTCCAAAAT----T---TT-G
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             16664 15 -     34685 -----------G--TCTCCAAAAT----T---TT-G
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               29789 15 -     47192 -----------G--TCTCCAAAAT----T---TT-G
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13388 19 +     20879 C-------CCTG--TTGCTAAAGT----G---TT-G
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5525 19 +     43469 A-A----AT--A--TTTCCAAAAA----T---TT-G
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  54477 19 -     92717 TA-----CT--A--TCTCCAAAAT----T---TT-G
i Avahi_laniger.k141_765380                              C 0 I 3
s Avahi_peyrierasi.k141_1424874                              55108 19 +     85213 TA-----CT--A--TCTCCAAAAT----T---TT-G
i Avahi_peyrierasi.k141_1424874                          C 0 I 3
s Balaenoptera_acutorostrata.KI537508.1                   15192497 19 +  23207421 C-A----CT--A--TCCCCAAAAT----T---GT-G
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2962 19 -     18090 C-A----CT--A--TCCCCAAAAT----T---GT-G
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    27191 19 +     34529 C-A----CT--A--TCTCCACAAC----T---GT-G
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    200247 19 -    288883 C-A----CT--A--TCTCCACAAC----T---GT-G
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20273452 19 +  48749331 C-A----CT--A--TCTCCACAAC----T---GT-G
i Bos_indicus.CM003047.1                                 C 0 I 37
s Bos_mutus.JH880303.1                                     1126008 19 -   1948126 C-A----CT--A--TCTCCACAAC----T---GT-G
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18084090 19 +  45695690 C-A----CT--A--TCTCCACAAC----T---GT-G
i Bos_taurus.CM000203.6                                  C 0 I 37
s Bubalus_bubalis.KI419123.1                               2819758 19 +   4408762 C-A----CT--A--TCTCCACAAC----T---GT-G
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Callibella_humilis.k141_1278103                             6516 15 -     10423 -----------A--TCTCCAAAAT----G---TT-G
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callithrix_geoffroyi.k119_69176                              355 15 +      5377 -----------A--TCTCCAAAAT----G---TT-G
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592216 15 - 189096842 -----------A--TCTCCAAAAT----G---TT-G
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1030 15 -     12329 -----------A--TCTCCAAAAT----G---TT-G
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10003016 19 -  17673402 C-A----TG--A--TCTCCAAAAT----T---CT-G
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2335492 19 -   7040546 C-A----TG--A--TCTCCAAAAT----T---CT-G
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  403789 19 -   1652518 C-A----TG--A--TCTCCAAAAT----T---CT-G
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17799958 19 -  60362399 T-A----CT--A--TCTCCAAAAT----T---CT-A
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                      706 19 -     43241 T-A----CT--A--TCTCCAAAAT----T---CT-A
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9035401 19 -   9314153 T-A----CT--A--TCTCCAAAAT----T---CT-A
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17959877 19 -  59632846 T-A----CT--A--TCTCCAAAAT----T---CT-A
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18501174 19 +  63665305 T-A----CT--A--TCTCCAAAAT----T---CT-A
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18830386 19 +  46296322 C-A----CT--A--TCTCCACAAC----T---GT-G
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18061106 19 -  44709034 C-A----CT--A--TCTCCACAAC----T---GT-G
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1783 17 -     12242 C-------C--A--TCCCTGAAAC----A---TT-G
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5892 19 -     11696 A-A----AT--A--TTTCCAAACA----T---TT-G
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137887 19 +    179628 C-------A--ATATCTCCAAAAT----T---TT-G
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     94313 19 +    217609 C-A----CT--A--TCTCCCAAAT----T---TT-G
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                         10956 15 -     11392 -----------A--TCTCCAAAAT----G---TT-G
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               7140 15 -      7577 -----------A--TCTCCAAAAT----G---TT-G
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25653560 15 +  26074798 -----------A--TCTCCAAAAT----T---TT-G
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                1498 15 +     28840 -----------A--TCTCCAAAAT----T---TT-G
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 1227 15 +     14051 -----------A--TCTCCAAAAT----T---TT-G
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Ceratotherium_simum.JH767749.1                          12232240 19 +  27778364 c-----act--g--tctctaaaat----t---tt-g
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3267 19 -     25243 C-A----CT--G--TCTCTAAAAT----T---TT-G
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4476477 19 +   4669795 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                         979 19 +     17872 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           1636 19 -     14043 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9669 19 +     27781 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         9837 19 -     20310 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          12817 19 +     29689 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7563 19 -     20078 CA-----TG--A--TCGCCAAAAT----T---TT-G
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          15485 19 -     27936 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            4351 19 -     17152 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38817896 19 +  39242232 CA-----CA--A--TCGCCAAAAT----T---TT-G
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223585 19 -  21565898 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40704 19 -     53127 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                         955 19 +     13442 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15504 19 -     27947 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         15480 19 +     17596 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          1523 19 +     14005 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1269 19 -      8501 C-A----CT--A--TCTCCAAAAT----T---TT-G
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             21854 19 -     52598 CA-----CT--A--TCTCCAAAAT----T---TT-G
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           17225 19 +     57038 CA-----CT--A--TCTCCAAAAT----T---TT-G
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1253659 17 +   2543920 C-------T--A--TCTCTGAAAT----G---TT-G
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                              18429464 19 -  18827391 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15900 19 -     50209 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422901 19 + 135778131 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 19084 19 +     19366 C-A----TT--A--TTTCCAAAAT----T---TT-T
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            174159 19 +    839153 C-A----TT--A--TCTCCAAAAT----T---TT-T
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1911377 19 +   2368649 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949629 19 + 200372422 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37911 19 +     84244 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17548829 19 -  53390261 C-A----CG--A--TCGCCAACAT----T---TT-G
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1248 19 +     23735 C-A----CT--A--TCTCCAAAAA----T---TT-G
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 50808 19 +     63868 C-AC----T--A--TCTCTAAAGT----T---TT-G
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11668321 17 + 224834208 C-AC----T--G--TCTCTA--GT----T---TT-G
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               3735 19 -     19598 C-A----CT--A--CCTCCAAAAT----T---TG-G
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29280 19 -     87169 C-A----CT--A--TTTCCAAAAT----T---TT-C
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837862 20 +   1526836 C-------A--G--T-GATGAAATCCCTT---TT-G
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  36652 17 +     51376 C-------T--A--TCTCTGAAAT----G---TT-G
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            64287 19 +   2246927 C-A----CT--G--TCTCCAAAAT----T---TT-G
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12538057 19 -  12879189 CA-----CT--A--TCTCTAAAAT----T---TT-G
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16812133 19 +  35494412 C-A----CT--A--TCCCCAAAAT----T---GT-G
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630888 19 +  20541912 A-A----AT--A--TCTCCAAAAT----T---TT-G
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  674089 19 +   1390856 c-----act--g--cctctaaaat----t---tt-g
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6840 19 +    198055 c-----act--g--tctctaaaat----t---tt-g
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37137 17 +     67921 C-------T--A--TCTCTGAAAT----G---CT-G
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Echinops_telfairi.JH980293.1                            48781349 14 + 111700974 -----------A--TCTCTAAAAT----T---T--T
i Echinops_telfairi.JH980293.1                           I 1 I 197
s Eidolon_helvum.KE759718.1                                  11313 19 +     11740 C-A----CT--A--TCTCCAAAAT----t---tt-g
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       311423 19 +    607251 C-A----CT--A--TCTCCACAAC----T---GT-G
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1098509 13 +  10337057 --------------TCTCCAAAAT----T---T--T
i Elephantulus_edwardii.JH947257.1                       C 0 I 1
s Ellobius_lutescens.LOEQ01008920.1                          21290 19 -    110024 C-A---A-T--A--TCTCTAAAGT----T---TT-G
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                            1196 19 +      8657 C-A---A-T--A--TCTCTAAAGT----T---TT-G
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16330093 19 -  41312741 C-A----TT--A--TCTCCAAAAT----T---CT-G
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2146504 19 -  14770903 A-----GGT--A--TCTCTAAAAC----T---TT-G
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1284349 19 +   4378816 C-A----CT--G--TCTCCCAAAT----T---TT-G
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18532169 19 -  39960074 C-A----CT--G--TCTCCCAAAT----T---TT-G
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               34198 19 +    498745 C-A----CT--G--TCTCCCAAAT----T---TT-G
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21206069 19 -  21539334 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11809 19 +    133382 C-A----CT--A--TCCCCAAAAT----T---GT-G
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             25746 19 -     44125 C-A----CT--A--TCCCCAAAAT----T---GT-G
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Eulemur_albifrons.k141_576796                              40900 19 -     44621 CA-----CT--A--TCTCCAAAAT----T---TT-G
i Eulemur_albifrons.k141_576796                          C 0 C 0
s Eulemur_collaris.k141_377015                                7281 19 -     16928 CA-----CT--A--TCTCCAAAAT----T---TT-G
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              16313 19 -     25546 CA-----CT--A--TCTCCAAAAT----T---TT-G
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            13509 19 +     26330 CA-----CT--A--TCTCCAAAAT----T---TT-G
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14744 19 +     23973 CA-----CT--A--TCTCCAAAAT----T---TT-G
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                13506 19 +     75513 CA-----CT--A--TCTCCAAAAT----T---TT-G
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 11436 19 +     97555 CA-----CT--A--TCTCCAAAAT----T---TT-G
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              928 19 +     13026 CA-----CT--A--TCTCCAAAAT----T---TT-G
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4980 19 -     17153 CA-----CT--A--TCTCCAAAAT----T---TT-G
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              14553 19 +    111500 CA-----CT--A--TCTCCAAAAT----T---TT-G
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237735 19 + 206538554 C-----GTT--A--TTTCCAAAAT----T---TT-G
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20196578 19 + 205367284 C-----gtt--a--tttccaaaat----t---tt-g
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 10331 19 -     36744 C-----GTT--A--TTTCCAAAAT----T---TT-G
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             851187 17 +   3816255 C-------T--A--TCTCTGAAAC----A---GT-A
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg2040                                     427384 19 -    453645 CC-----TC--G--TCTCCAAAAT----T---TT-G
i Galago_moholi.ctg2040                                  I 4 C 0
s Galago_senegalensis.k141_631886                             5074 19 +     11339 CC-----TC--G--TCTCCAAAAT----T---TT-G
i Galago_senegalensis.k141_631886                        I 4 C 0
s Galagoides_demidoff.k141_1711393                            2368 23 +     41679 CC-CTCCCC--G--TCTCCAAAAT----T---TT-G
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               1983 19 -      9135 CA-----TT--A--TCTCCAAAAT----T---TT-G
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     609388 19 -    660261 C-A----CT--A--TCTCCACAAC----T---GT-G
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Gorilla_beringei.k141_3596273                              16868 19 -     32273 CA-----CT--A--TCGCCACAAT----T---TT-G
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186339004 19 + 186649187 CA-----CT--A--TCGCCACAAT----T---TT-G
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33395 17 +     78134 C-------C--A--TCTCTGAAAT----T---TG-G
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           7608 19 -     19426 CA-----CT--A--TCTCCAAAAT----T---TT-G
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12761 19 -     15286 CA-----CT--A--TCTCCAAAAT----T---TT-G
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             14400 19 +     18253 CA-----CT--A--TCTCCAAAAT----T---TT-G
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         14501 19 -     41752 CA-----CT--A--TCTCCAAAAT----T---TT-G
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         14338 19 -     16460 CA-----CT--A--TCTCCAAAAT----T---TT-G
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243118 19 +    327341 C-A----CT--A--TTTCCAAAAT----T---TT-G
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18592 19 +     36099 C-A----CT--A--TCTCCACATC----T---GT-G
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20662945 15 +  22651954 C-------T--A--T--CTGAAAT----G---TT-G
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1679 18 +      7595 T-A----CC--A--GCTT-ACAAT----T---TT-G
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       111274 19 +   1711038 C-A----TT--A--TCTCCAAAAC----T---TT-G
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               42705 19 +     43066 C-A----CT--A--TCTCCAAAAC----T---TT-G
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    435669 19 +    630532 CA-----CT--A--TCGCCAAAAT----T---TT-G
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45820 19 +     55795 C-A----CC--A--TTTCCAAAAT----T---CT-G
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83840 17 +    135385 C-------C--A--GCTCTGAAAT----C---TT-A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7521670 19 -   7955117 C-------ACCA--TTGCTGAAAT----G---TT-A
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   23299 19 +     31101 CA-----CT--A--TCTCCAAAAT----T---TT-G
i Indri_indri.k141_3655594                               C 0 I 3
s Inia_geoffrensis.IniGeo_flattened_line_48101               23350 19 +     23964 C-A----CT--G--TCCCCAAAAT----T---GT-G
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8277929 19 -   9596543 C-AC----T--A--TCTCTCAAAC----T---GT-G
i Jaculus_jaculus.JH725527.1                             I 240 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                2707 19 -      3359 C-A----CT--A--TCCCCCAAAT----T---AT-G
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    17154 19 -     42476 A-----GGT--G--TCCCTAAAAC----A---TT-A
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15524853 19 -  30322482 CA-----CT--A--TCTCCAAAAT----T---TT-G
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        8794 15 +     64341 -----------A--TCTCCAAAAT----T---TT-G
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           1134 15 -     35062 -----------A--TCTCCAAAAT----T---TT-G
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        8821 15 +     35603 -----------A--TCTCCAAAAT----T---TT-G
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    30434 15 +     38576 -----------A--TCTCCAAAAT----T---TT-G
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         27138 15 +     66356 -----------A--TCTCCAAAAT----T---TT-G
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         11743 19 -     23766 CA-----CT--A--TCTCCAAAAT----T---TT-G
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29796 19 +     45836 CA-----CT--A--TCTCCAAAAT----T---TT-G
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          2342 19 +     25010 CA-----CT--A--TCTCCAAAAT----T---TT-G
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27736 19 +     54090 CA-----CT--A--TCTCCAAAAT----T---TT-G
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3043840 19 +   3914936 C-A----CT--A--TCTCCAAAAT----T---CT-G
i Leptonychotes_weddellii.KB714746.1                     I 11 C 0
s Lepus_americanus.LepAme_scaffold_107385                     7254 17 -     14121 T-------T--A--TCTCCAAAAT----G---TT-G
i Lepus_americanus.LepAme_scaffold_107385                I 2 C 0
s Lipotes_vexillifer.KE559953.1                             268401 19 -    662738 C-A----CT--A--TCCCCAAAAT----T---GT-G
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1438020 19 +   1826925 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            6624 19 +     11245 CC-----CT--A--TCTCTAAAAT----T---TT-G
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1005445 19 +   6120653 CC-----CT--A--TCTCTAAAAT----T---TT-G
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4218136 19 -  43346337 C-A----CT--G--TCTCCAAAAT----G---TT-G
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17956117 19 -  59628241 T-A----CT--A--TCTCCAAAAT----T---CT-A
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               7835 19 +     40492 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59677094 19 +  60120075 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13610 19 -     26193 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            81394 19 -    114318 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  7081 19 -     23192 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16554 19 -     29190 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  25119 19 +     37952 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186840208 19 + 187317192 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458771 19 -  25927173 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  80967 19 +     89720 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 7968 19 +     20474 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   7768 19 -     14993 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  330634 19 -    668171 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 6081 19 -     24072 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26706 19 -     45290 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91407 19 +     94391 C-A----CT--A--TTTCCAAAAT----T---TT-G
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23938297 19 -  24302211 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352419 19 +    752769 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              19026 18 +    737560 C-A----AT--G--CCTCCAAAAT----T---TT--
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              51012 18 -    317179 C-A----CT--G--CCTACAAAAT----T---TT--
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33103865 19 -  40650429 C-------ACTA--TTGCTGAAAT----G---TT-A
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        14142 19 -    207569 C-A----TT--A--TCTCCAAAAA----T---CT-A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10833 19 +     13704 C-A----TT--A--TCTCCCAAAT----T---CT-G
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 33517 19 +    140813 C-AC----T--A--TCTCTAAAAT----T---TT-G
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12182983 17 -  29670104 C-AC----T--A--TCTCTA--GT----T---TT-G
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    4018 19 +     10310 C-A----GT--A--TCCCCAAAAT----T---GT-G
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Mico_argentatus.k141_1239457                                6952 15 -      7380 -----------A--TCTCCAAAAT----G---TT-G
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_schneideri.k141_1950671                                      6925 15 -      7356 -----------A--TCTCCAAAAT----G---TT-G
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18292280 19 -  93316391 CA-----CT--A--TCTCCAAAAT----T---TT-G
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    23229 14 -    145209 -----------A--TCTCTAAAAT----T---T--T
i Microgale_talazaci.MicTal_scaffold_6613                I 1 I 223
s Micronycteris_hirsuta.MicHir_scaffold_52381                16429 19 -     19307 A-A----AT--A--TCTCCAAAAT----G---TT-G
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11261269 19 -  27267610 C-AC----T--A--TCTCTAAATT----T---TT-G
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1851385 19 +   8254450 A-A----AA--A--TCTCCAAAAT----G---AG-G
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 3
s Miniopterus_schreibersii.MinSch_scaffold_18080             35065 19 +     64694 A-A----AA--A--TCTCCAAAAT----G---AG-G
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 3
s Miopithecus_ogouensis.k141_534055                          10003 19 -     28506 CA-----CA--A--TCGCCAAAAT----T---TT-G
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6705 19 -      8324 C-A----CT--A--TCTCCAAAAT----T---CT-G
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      9824 19 -     37649 CA-----CT--A--TCTCCAAAAT----G---TT-G
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    27523 19 -    437263 C-A----CT--A--TCCCCAAAAT----T---GT-G
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142429 19 -    366855 G-A----TT--A--TCTCCAAAAT----T---TT-G
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   1468 19 +     82753 C-A----CT--G--TCTCCACAAC----T---GT-G
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   36218 19 +     37127 C-A----CT--A--TTTCCAAAAT----T---TT-G
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           7607 19 +     14753 A-A----GT--A--TCTCTAAAAC----T---TT-G
i Murina_feae.MurFea_scaffold_85699                      I 6 C 0
s Mus_caroli.LT608237.1                                   84362131 19 - 120012414 C-A---T-C--C--TCTCTAAAGT----G---TT-G
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87651124 19 - 129401213 C-A---T-T--C--TCTCTAAAGT----T---TT-G
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31355781 22 -  89631738 C-A---T-c--a--tctttaaagt----tttttt-g
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90753187 19 - 130317789 C-A---T-C--T--TCTCTAAAGT----T---TT-G
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               302245 19 -  14710649 C-A----TT--A--TCTCCAAAAT----T---CT-G
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     71971 17 -     80779 C-------C--A--TCTCTGAAAC----G---TT-G
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                281247 19 -  10118263 A-A----GT--A--TCTCTAAAAC----T---TA-G
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1588503 19 -   6019432 A-A----GT--A--TCTCTAAAAC----T---TT-G
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3904599 19 -   4330536 A-A----GT--A--TCTCTAAAAC----T---TA-G
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                         750 19 +      1835 A-A----GT--A--TCTCTAAAAC----T---TT-G
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190026 19 +    196477 C-A----CT--A--TCTCCAAAAT----T---TT-T
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2034829 19 -   3037898 C-AC----C--G--TCTCCAAAAT----T---TT-G
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               16005 19 +     21681 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308294 19 +  31847680 C-A----CT--A--TCTCCAAAAT----T---CT-G
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5866479 19 +   7148211 C-A----CT--A--TCCCCAAAAT----T---GT-G
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    758662 19 +    783361 A-A----AT--A--TCTTCAAAAT----T---TT-G
i Noctilio_leporinus.NocLep_scaffold_251                 I 10 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150180 19 -   9404916 T-A----CT--A--TCTCCAAAAT----T---CT-A
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102586989 20 - 196305487 CC-----CC-AG--TCTCTAAAAT----T---TT-G
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              913 20 +      2075 CC-----CC-AG--TCTCTAAAAT----T---TT-G
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105762344 20 + 199412804 CC-----CC-AG--TCTCTATAAT----T---TT-G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1364631 17 +   3988456 T-------T--G--TCTCCAAAAT----T---CT-G
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              507436 19 -   2017862 C-A----CT--A--TCTCCAAAAT----T---CT-G
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          77305 19 -    150152 C-A----CT--A--TCTCCACAAC----T---GT-G
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   25923 19 +     28053 C-AC----T--A--TCTCTAAAGT----T---TT-G
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    80959 19 +    102263 C-AC----T--G--TCTCTAAAGT----T---TT-G
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2782402 19 -  10937097 C-A----CT--A--CCCCCAAAAT----T---GT-G
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387              10897 18 -     18566 C-----GTT--A--TCTCCAAAAT----T---T--T
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67148113 17 + 174332312 T-------T--A--TCTCCAAAAT----G---TT-G
i Oryctolagus_cuniculus.CM000791.1                       I 2 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       463129 19 -    559221 T-A----CT--G--TCTCCAAAAT----T---CT-A
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4900 18 +      8798 CC-----CC--A--TCTCCA-AAT----T---TT-G
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             697063 17 -   1103335 CC-----C---A--TCTCCA-AAT----T---TT-G
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   17586567 19 +  44047080 C-A----CT--A--TCTCCACATC----T---GT-G
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      174544 19 -    191736 C-A----CT--A--TCTCCACATC----T---GT-G
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    44956 19 +     80009 CA-----CT--A--TCGCCACAAT----T---TT-G
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.KZ622849.1                                 23159 19 +    110857 CA-----CT--A--TCGCCACAAT----T---TT-G
i Pan_troglodytes.KZ622849.1                             I 165 I 325
s Panthera_onca.PanOnc_flattened_line_3271                  151939 19 +    230217 C-A----TT--A--TTTCCAAAAT----T---TT-G
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                265148 19 +  18783137 c-----att--a--tttccaaaat----t---tt-g
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4722028 19 -   8748460 c-----att--a--tttccaaaat----t---tt-g
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1265461 19 -   2937107 C-A----CC--A--TCTCCACAGC----T---GT-G
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183444097 19 + 183742232 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7743 19 +     20448 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20564555 19 +  20919399 CA-----CG--A--TCGCCAAAAT----T---TC-G
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6487 19 +     41871 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     9780 19 +     27711 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                   777 19 -     11374 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13440 18 -     78924 C-A----CT--A--TTTCCAA-AT----T---TT-G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10884 25 +     13100 CCACCCCCA--G--TCTCCAAAAT----T---TTTG
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             9278 25 +     25941 CCACCCCCA--G--TCTCCAAAAT----T---TTTG
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18195539 19 -  18517816 C-AC----G--A--TCTCTAAAGT----T---TT-G
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28855 17 -     29689 C-------T--G--TTTCTGAAAT----A---TT-G
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               9441 19 +     63832 C-A----CT--A--TCCCCAAAAT----T---GT-G
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           44496 19 +     62158 CA-----CG--A--TCGCCAACAT----T---TT-G
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        39243 19 +     89929 CA-----CG--A--TCGCCAACAT----T---TT-G
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40659 19 +     51399 CA-----CG--A--TCGCCAACAT----T---TT-G
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296898 19 -  14605196 CA-----TG--A--TCGCCAACAT----T---TT-G
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2540 19 +     22620 A-A----GT--A--TCTCTAAAAC----T---TT-G
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           35147 19 +     35617 C-A----CT--A--ACCCCAAAAT----T---GT-G
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189132000 19 + 189387572 CA-----CT--A--TCGCCAAAAT----T---TT-G
i Pongo_abelii.CM009266.2                                C 0 I 24610
s Pongo_pygmaeus.ctg66                                     9571607 19 +   9816681 CA-----CT--A--TCGCCAAAAT----T---TT-G
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               74180 19 -     81375 CA-----TG--A--TCGCCAACAT----T---TT-G
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              6001 19 +     19060 CA-----CG--A--TCGCCAACAT----T---TT-G
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 14134 18 -     22811 C-A----CC--A--GCTT-ACAAT----T---TT-G
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2597533 19 -   4620579 CA-----CT--A--TCTCCAAAAT----T---TT-G
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     991520 19 +   2598838 TA-----CT--A--TCTCCAAAAT----T---TT-G
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 3
s Propithecus_coronatus.k141_347390                          29832 19 +     38485 TA-----CT--A--TCTCCAAAAT----T---TT-G
i Propithecus_coronatus.k141_347390                      C 0 I 3
s Propithecus_diadema.k141_58108                              1874 19 -     13098 TA-----CT--A--TCTCCAAAAT----T---TT-G
i Propithecus_diadema.k141_58108                         C 0 I 3
s Propithecus_edwardsi.k141_1176054                          27353 19 +     35766 TA-----CT--A--TCTCCAAAAT----T---TT-G
i Propithecus_edwardsi.k141_1176054                      C 0 I 3
s Propithecus_perrieri.k141_1200571                           5540 19 -     24134 TA-----CT--A--TCTCCAAAAT----T---TT-G
i Propithecus_perrieri.k141_1200571                      C 0 I 3
s Propithecus_tattersalli.k141_790011                        29365 19 -     67325 TA-----CT--A--TCTCCAAAAT----T---TT-G
i Propithecus_tattersalli.k141_790011                    C 0 I 3
s Propithecus_verreauxi.k141_956661                           5588 19 -      6182 TA-----CT--A--TCTCCAAAAT----T---TT-G
i Propithecus_verreauxi.k141_956661                      C 0 I 3
s Psammomys_obesus.NESX01036370.1                            11163 19 -     21651 C-AC----T--A--TCTCTAAAAT----T---TT-G
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            15938 19 -     21811 A-A----GT--A--TCTCCAAAAT----T---TT-G
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41028 19 +     42204 C-A----TT--A--TCTCCAAAAT----T---CT-G
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22977553 19 +  28871421 C-A----CT--A--TCTCCAAAAT----t---tt-g
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                7606 19 -      8028 C-A----CT--A--TCTCCAAAAT----T---TT-G
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20275100 19 -  38429054 c-----att--a--tttccaaaat----t---tt-g
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             15987 19 -     91421 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7610107 19 +   7812017 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             15986 19 -     72585 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6044 19 +     55207 c-----act--a--tctccacaac----t---gt-a
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53571379 19 +  90668790 C-AC----C--A--TCTCTACAAC----T---CT-G
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        367762 19 -   3329780 C-A----TT--A--TTTCCAAAAC----T---TT-G
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             7697 19 -     11128 CG-----CG--A--TCGCCAAAAT----T---TT-G
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91237046 19 - 195417433 CG-----CG--A--TCGCCAAAAT----T---TT-G
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672702 19 +   7961872 CG-----CG--A--TCGCCAAAAT----T---TT-G
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88590 19 -     96226 C-A----CT--A--TCTCAAAAAT----t---tt-g
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_8081                                  2110 15 +     42994 -----------A--TCTCTAAATT----T---TT-G
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                              803 15 +      2253 -----------A--TCTCCAAAAT----T---TT-G
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               1232 15 -      8737 -----------A--TCTCCAAAAT----T---TT-G
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                               885 15 +      2343 -----------A--TCTCCAAAAT----T---TT-G
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209475764 15 + 209938924 -----------A--TCTCCAAATT----T---TT-G
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                 208 15 -      7576 -----------A--TCTCCAAAAT----T---TT-G
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951832 15 - 121099817 -----------A--TCTTCAAAAT----T---TT-G
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24174 15 +     46362 -----------A--TCTTCAAAAT----T---TT-G
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               24269 15 +     45824 -----------A--TCTTCAAAAT----T---TT-G
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             40948 15 -     64574 -----------A--TCTTCAAAAT----T---TT-G
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4021 15 -     23631 -----------A--TCTTCAAAAT----T---TT-G
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 24165 15 -     61129 -----------A--TCTTCAAAAT----T---TT-G
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5421514 15 -   5703754 -----------A--TCTCCAAAAT----T---TT-G
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          56755 15 -     80660 -----------A--TCTCCAAAAT----T---TT-G
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153973 19 -    313613 C-A----CT--A--TCTCCAAGAT----T---TT-G
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                          878 19 -     12572 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27728 19 +     39453 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            8246 19 +     27826 CA-----TG--A--TCGCCAAAAT----T---TT-G
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             7768 19 -     19483 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      1069 19 -     12762 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                            930 19 +     13763 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     1072 19 -     30804 C-AC----T--A--TCTCTAGAGT----T---TT-G
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               4534 19 +   1910179 C-A----CT--A--TCTCAAAAAT----G---TT-G
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13651778 19 -  18376816 C-A----CT--G--CCTCCAAAAT----T---TA-G
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1954723 19 -   3870691 C-------ACTA--TTGCTGAAAT----G---TT-A
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             31518 19 +     97271 C-A----TT--T--TCTCCAAAAT----T---GT-G
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              19120 19 -    196729 C-A----CT--G--TTTCCAAAAT----T---TT-G
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6812056 17 +  69701581 T-----GCT--A--TCTC--AAAA----T---TT-G
i Sus_scrofa.CM000828.4                                  C 0 I 148
s Tadarida_brasiliensis.TadBra_scaffold_25820                11591 19 +     41958 A-A----AT--A--TCTCCAAAAT----G---TG-G
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73385 20 +    116680 C-A----CT--A--TCTCCAAAGT----T--TTT-T
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      119549 19 -    156842 C-A----CT--G--TCTCCAAAAT----T---TT-G
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    388022 19 +    539355 C-A----CT--G--TCTCCAAAAT----T---TT-G
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Theropithecus_gelada.CM009954.1                        186429415 19 + 186847797 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106152 17 +    114563 T-------T--G--TTTCTGCAAT----G---TT-G
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 5 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   7159 19 +      8208 C-A----CT--A--TCCGTGAAAT----T---TT-G
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     81985 19 +    610378 A-A----AT--A--ACTCCAAAAT----T---TT-G
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         11819 19 -     20410 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                       933 19 -     12674 CA-----CG--A--TCGCCAACAT----T---TT-G
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       11920 19 +     19930 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       8331 19 -     19997 CA-----CA--A--TCGCCAAAAT----T---TT-G
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48470 19 -     60166 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        15942 19 -     27529 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     15886 19 -     18194 CA-----CA--A--TCGCCAAAAT----T---TT-G
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9598 19 -     21137 CA-----CA--A--TCGCCAAAAT----T---TT-G
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    8301 19 -     10723 CA-----CA--A--TCGCCAAAAT----T---TT-G
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7473 19 +      9834 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        25786 19 +     32220 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5939888 19 +   6242583 CA-----CG--A--TTGCCAAAAT----T---TT-G
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        9139 19 +     20839 CA-----CG--A--TCGCCAAAAT----T---TT-G
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_140459                   1716 19 -      1748 C-A----CC--A--GCTCCACAGT----C---AT-G
i Tragulus_javanicus.TraJav_scaffold_140459              C 0 N 0
s Trichechus_manatus.JH594705.1                            4294040 19 +  10818551 C-A----CT--G--TCTCCAAAAT----G---TT-G
i Trichechus_manatus.JH594705.1                          I 8 C 0
s Tupaia_chinensis.KB320699.1                              2156569 17 +   4065304 -------CT--A--TCTCTAAACT----T---TT-G
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                    10012 17 -     10553 -------CT--A--TCTCTAAACT----T---TT-G
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15738641 19 +  33153633 C-A----CT--A--TCTCCAAAAT----T---GT-G
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Ursus_maritimus.KK499267.1                               4851229 19 -   5085361 C-A----GT--A--TCTCcaaaat----t---ct-g
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  12198 19 +     50397 CA-----CT--A--TCTGCAAAAT----T---TT-G
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             12257 19 +     24756 CA-----CT--A--TCTGCAAAAT----T---TT-G
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5372549 19 -   5488506 T-A----TG--A--TCTCCAAAAT----T---CT-G
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 11580 19 -     43706 T-A----CT--A--TCTCCAAAAT----T---CT-A
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          1856 19 +    224448 C-------ACTG--TTGCTGAAAT----G---TT-G
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      15658 19 +     63895 C-AC----T--A--TTTCTGAACC----C---GT-G
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_71469            12333 19 +     12536 C-A----CT--A--TCCCCAAAAT----T---GT-G
i Ziphius_cavirostris.ZipCav_flattened_line_71469        C 0 N 0
e Chiropotes_albinasus.k141_2206961                           1651 303 -     15524 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   54072  0 -     77625 C
e Tarsius_wallacei.k141_254427                                1877  3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080  3 +     70052 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Glis_glis.GliGli_scaffold_19807                            32063  0 +     49224 C
e Erinaceus_europaeus.JH835339.1                           3329051  0 -   7059049 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cephalopachus_bancanus.k141_1423433                         6085  3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Carlito_syrichta.NW_007259797.1                           156587  3 -    496798 I
e Arctocebus_calabarensis.k141_2318572                       12167  0 +     14667 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       7632 33 +     62944 CCAC-T-G-TTCACCTAAATT-A-----ACCCTC-T-AATT-C-A---A
s Acinonyx_jubatus.LLWD01001279.1                           828112 33 -   1699592 cCACTT-G-TTC-CCTAAATT-A-----ACCCTC-T-ATTC-C-A---A
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     71587 32 +     87051 CCAC-T-A-TTGACCTAAATT-A-----GGCCCC-T-CTT--C-A---A
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511387 34 -  29979442 CCATTT-A-CTCACCTAAATT-A-----GCCCTC-T-ATTC-C-A---A
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             80122 34 -    347723 tcattt-a-ttcACCTACGTT-A-----ACCCTC-T-ATTC-C-A---A
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     75294 32 -     89534 TCAC-T-G-TTCGCTTAAATT-A-----ACTCCC-T-TTT--C-A---A
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   15561 33 -     52922 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15481 33 -     28001 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          5979 33 -     18505 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           6831 33 -     12518 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              8404 33 +     51355 CCAT-T-A-TTTACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                1513 33 -     36483 CCAT-T-A-TTTACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              11965 33 +     28687 CCAT-T-A-TTTACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                  478 33 +     27940 CCAT-T-A-TTTACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            1522 33 -      9457 CCAT-T-A-TTTACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                              478 33 +     30492 CCAT-T-A-TTTACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              4473 33 +     47717 CCAT-T-A-TTTACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              1205 33 +      5663 CCAT-T-A-TTTACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             15657 33 +     50774 CCAT-T-A-TTTACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          676287 32 -   2318259 GCAC-T-A-TTCACCTAAACA-A-----ACCCTC-T-GGAT-C-A----
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 5
s Anoura_caudifer.AnoCau_scaffold_1412                      186154 33 +    412891 CCGC-T-G-TTCACCTAAATT-A-----CCCCTT-T-ATTC-C-A---A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             98767 32 -    100397 CCCC-T-A-TTCACCTAAACT-A-----GCCTTC-T-GGAC-C-A----
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 I 5
s Aotus_azarae.k141_3104676                                  16646 33 -     33861 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            16643 33 -     34016 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299070 33 -   5030052 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             16679 33 -     34685 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               29804 33 -     47192 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13407 33 +     20879 CCAC-T-G-TTCATCTAAATG-A-----AGGCCC-T-CTT-CC-A---C
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5544 33 +     43469 CGGC-T-G-TTCACCTAAATT-A-----GCCCTC-T-ATTC-C-A---A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  54499 26 -     92717 ----------TCACTGAAATT-A-----ATCCTC-T-ATTC-C-A---A
i Avahi_laniger.k141_765380                              I 3 C 0
s Avahi_peyrierasi.k141_1424874                              55130 26 +     85213 ----------TCACTGAAATT-A-----ATCCTC-T-ATTC-C-A---A
i Avahi_peyrierasi.k141_1424874                          I 3 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15192516 33 +  23207421 CCAC-T-A-TTCACCTAAACT-A-----ACACTC-T-ATGC-C-A---A
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         2981 33 -     18090 CCAC-T-A-TTCACCTAAACT-A-----ACACTC-T-ATGC-C-A---A
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    27210 32 +     34529 CCAC-T-A-TTCACCTAAACA-A-----ACTCTC-T-GGAC-C-T----
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 5
s Bison_bison.KN261452.1                                    200266 32 -    288883 ccat-t-a-ttcacctaaact-a-----accctc-t-ggac-c-a----
i Bison_bison.KN261452.1                                 C 0 I 5
s Bos_indicus.CM003028.1                                  18363171 32 - 116941312 CCAC-T-A-TTCACCTAAACT-A-----ACCCTG-T-GGAC-C-A----
i Bos_indicus.CM003028.1                                 n 37 I 44
s Bos_mutus.JH880303.1                                     1126027 32 -   1948126 ccac-t-a-ttcacctaaact-a-----atcctc-t-ggac-c-a----
i Bos_mutus.JH880303.1                                   C 0 I 5
s Bos_taurus.CM000184.6                                   18200145 32 - 114055384 CCAC-T-A-TTCACCTAAACT-A-----ACCCTG-T-GGAC-C-A----
i Bos_taurus.CM000184.6                                  n 37 I 44
s Bubalus_bubalis.KI419123.1                               2819777 32 +   4408762 ccac-t-a-ttcacctgaact-a-----accctc-t-ggac-c-a----
i Bubalus_bubalis.KI419123.1                             C 0 I 5
s Callibella_humilis.k141_1278103                             6531 32 -     10423 CCAC-T-A-TTCACCTAAATT-A-----ACCCT--T-AGTT-C-A---A
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callithrix_geoffroyi.k119_69176                              370 32 +      5377 CCAC-T-A-TTCACCTAAATT-A-----ACCCT--T-AGTT-C-A---A
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592231 32 - 189096842 CCAC-T-A-TTCACCTAAATT-A-----ACCCT--T-AGTT-C-A---A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1045 32 -     12329 CCAC-T-A-TTCACCTAAATT-A-----ACCCT--T-AGTT-C-A---A
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10003035 33 -  17673402 CCACTT-A-TTCACCTAAACC-A-----AC-CTC-T-ATGC-C-A---A
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2335511 33 -   7040546 CCACTT-A-TTCACCTAAACC-A-----AC-CTC-T-ATGC-C-A---A
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  403808 33 -   1652518 CCACCT-A-TTCACCTAAACC-A-----AC-CTC-T-ATGC-C-A---A
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17799977 34 -  60362399 CCACTT-G-TTCACCTAAATT-A-----ACCCTC-T-ATTC-C-A---A
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                      725 34 -     43241 CCACTT-G-TTCACCTAAATT-A-----ACCCTC-T-ATTC-C-A---A
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9035420 34 -   9314153 CCACTT-G-TTCACCTAAATT-A-----ACCCTC-T-ATTC-C-A---A
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17959896 34 -  59632846 CCACTT-G-TTCACCTAAATT-A-----ACCCTC-T-ATTC-C-A---A
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18501193 34 +  63665305 CCACTT-G-TTCACCTAAATT-A-----ACCCTC-T-ATTC-C-A---A
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18830405 32 +  46296322 CCAC-T-A-TTCACCTAAACA-A-----ACCCTC-T-GGAT-C-A----
i Capra_aegagrus.CM003241.1                              C 0 I 5
s Capra_hircus.CM004588.1                                 18061125 32 -  44709034 CCAC-T-A-TTCACCTAAACA-A-----ACCCTC-T-GGAT-C-A----
i Capra_hircus.CM004588.1                                C 0 I 5
s Capromys_pilorides.CapPil_scaffold_65020                    1800 27 -     12242 TCAT-T-C-TGCACCTGAACT-A----------C-C-CAC--C-A---A
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5911 33 -     11696 CTGC-T-G-TTCACCTAAATT-A-----GCCCTC-T-ATTC-C-A---A
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137906 32 +    179628 CTAC-T-C-TTCTCCTAAGTT-A-----ACCCCT-C-TTC--C-A---A
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     94332 33 +    217609 TCGC-T-C-TCCACCTAAACT-A-----ACCCTA-T-GTGC-C-A---A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                         10971 32 -     11392 CCAC-T-A-TTCACCTAAATT-A-----ACCCT--T-AGTT-C-A---A
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               7155 32 -      7577 CCAC-T-A-TTCACCTAAATT-A-----ACCCT--T-AGTT-C-A---A
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25653575 33 +  26074798 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                1513 33 +     28840 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 1242 33 +     14051 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Ceratotherium_simum.JH767749.1                          12232259 33 +  27778364 ccac-t-a-ttcacctaaatt-a-----accttc-t-attc-c-a---a
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3286 33 -     25243 CCAC-T-A-TTCACCTAAATT-A-----ACCTTC-T-ATTC-C-A---A
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4476496 33 +   4669795 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                         998 33 +     17872 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           1655 33 -     14043 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9688 33 +     27781 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         9856 33 -     20310 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          12836 33 +     29689 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7582 33 -     20078 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          15504 33 -     27936 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            4370 33 -     17152 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38817915 33 +  39242232 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223604 33 -  21565898 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40723 33 -     53127 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                         974 33 +     13442 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15523 33 -     27947 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         15499 33 +     17596 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          1542 33 +     14005 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1288 31 -      8501 CCAC-T-A-TTTGCCTAAATT-A-----ATC--C-T-GTTT-C-A---A
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             21873 32 -     52598 CCAC-T-G-TTCGCCTAAATT-A------CCCTC-T-ATTC-C-A---A
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           17244 32 +     57038 CCAC-T-G-TTCGCCTAAATT-A------CCCTC-T-ATTC-C-A---A
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1253676 19 +   2543920 CCAA-T-C-TTCACCTAAACT-A--------------------------
i Chinchilla_lanigera.JH722012.1                         C 0 I 7
s Chlorocebus_aethiops.ctg25                              18429483 33 -  18827391 CCAC-T-A-TTCACTTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15919 33 -     50209 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422920 33 + 135778131 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 19103 34 +     19366 CCAC-T-AAGTCACCAAAATC-A-----ACCCTC-T-GTTT-C-A---A
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            174178 33 +    839153 CCAC-T-AAGTCACCAAAATC-A-----ACCCTC-T-GT-T-C-A---A
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1911396 33 +   2368649 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949648 33 + 200372422 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37930 33 +     84244 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17548848 33 -  53390261 CCAC-C-A-CTCACCTGAATT-A-----ATTGTG-T-ATCT-C-A---A
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1267 33 +     23735 CCAC-T-A-TTCACCTAAATT-A-----ACACTC-T-ATTC-C-A---A
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 50827 30 +     63868 CC---T-A-TTGACCTAAATT-A-----GCCCCA-T-CTT--C-A---A
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11668338 32 + 224834208 CCAC-T-A-TTGACCTAAATT-A-----GGCCCC-A-CTG--C-A---A
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               3754 32 -     19598 TCAC-T-C-TTCCCTTTAACT-A-----GC-ATC-T-AATT-A-A---A
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29299 34 -     87169 CCATTT-A-TTCACCTGAATT-A-----ACCCTC-T-ATTC-C-A---A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 11
s Ctenodactylus_gundi.CteGun_scaffold_65                    837882 33 +   1526836 TCCC-T-T-TTCACCAAAATT-A-----ACTCCC-A-CTT--TCA---A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 11
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  36669 27 +     51376 CAAA-T-T-TGCACCTAAACT-G----------C-T-CAT--C-A---A
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            64306 31 +   2246927 CCAG-T-A-TTCACCTAAATC-A-----ATC--C-T-GTTT-C-A---A
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12538076 33 -  12879189 CTAC-T-A-TTCACCTATATT-A-----ACCCTC-T-ATTC-C-A---A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16812152 33 +  35494412 CCAC-T-A-TTCACCTAAACT-A-----ACACTC-T-ATGC-C-A---A
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630907 33 +  20541912 CCAC-T-A-GTCACCCAAATT-A-----GCCCTC-T-ATTC-C-A---A
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  674108 33 +   1390856 ccac-t-a-ttcacctaaatt-a-----accttc-t-attc-t-a---a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6859 33 +    198055 ccac-t-a-ttcacctaaatt-a-----accttc-t-attc-c-a---a
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37154 27 +     67921 CCAC-T-C-TTTACCTAAACT-A----------C-T-CAT--C-A---A
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Echinops_telfairi.JH980293.1                            48781560 33 + 111700974 ccac-t-a-ttCACTTAAATT-A-----TCTTTC-T-TCTC-C-C---A
i Echinops_telfairi.JH980293.1                           I 197 C 0
s Eidolon_helvum.KE759718.1                                  11332 33 +     11740 ccac-t-a-ttcacctaaatt-a-----actctc-t-attc-c-a---a
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       311442 32 +    607251 ccac-t-a-ttcacctaaact-a-----accctc-t-ggac-c-a----
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 5
s Elephantulus_edwardii.JH947257.1                         1098523 33 +  10337057 TCAT-T-A-TTCACCTAAATG-A-----GTTTTC-T-ATTG-C-A---A
i Elephantulus_edwardii.JH947257.1                       I 1 I 8
s Ellobius_lutescens.LOEQ01008920.1                          21309 32 -    110024 CCAC-T-A-TTGACCTAAATT-A-----GCCCCC-T-CAG--C-A---A
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                            1215 32 +      8657 CCAC-T-A-TTGACCTAAATT-A-----GCCCCC-T-CAG--C-A---A
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16330112 34 -  41312741 CCACTT-A-TTTACCTAAATC-A-----ACCCTC-T-ATTT-C-A---A
i Enhydra_lutris.KZ291758.1                              C 0 I 8
s Eptesicus_fuscus.JH977646.1                              2146523 33 -  14770903 CCAT-T-A-TTCGCCTAAATT-A-----GCCCTC-T-ATTC-C-A---A
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1284368 33 +   4378816 CCAC-T-A-TTCACTTAAATT-A-----ACCTTC-T-CTTT-C-A---G
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18532188 33 -  39960074 CCAC-T-A-TTCACTTAAATT-A-----ACCTTC-T-CTTT-C-A---G
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               34217 33 +    498745 CCAC-T-A-TTCACTTAAATT-A-----ACCTTC-T-CTTT-C-A---G
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3329051 29 -   7059049 -------ATTTCACCTAAACA-A-----GCCATC-T-GTTT-C-A---A
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21206088 33 -  21539334 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11828 33 +    133382 ccac-t-a-ttcacctaaact-a-----acactc-t-atgc-c-a---a
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             25765 33 -     44125 CCAC-T-T-TTCACCTAAACT-A-----ACACTC-T-ATGC-C-A---A
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Eulemur_albifrons.k141_576796                              40919 33 -     44621 CTAC-T-G-TTCACCTAAATT-C-----ATCCTC-T-GTTC-C-A---A
i Eulemur_albifrons.k141_576796                          C 0 C 0
s Eulemur_collaris.k141_377015                                7300 33 -     16928 CTAC-T-G-TTCACCTAAATT-C-----ATCCTC-T-GTTC-C-A---A
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              16332 33 -     25546 CTAC-T-G-TTCACCTAAATT-C-----ATCCTC-T-GTTC-C-A---A
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            13528 33 +     26330 CCAC-T-G-TACACCGAAATT-C-----ATCCTC-T-GTTC-C-A---A
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14763 33 +     23973 CTAC-T-G-TTCACCTAAATT-C-----ATCCTC-T-GTTC-C-A---A
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                13525 33 +     75513 CCAC-T-G-TACACCGAAATT-C-----ATCCTC-T-GTTC-C-A---A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 11455 33 +     97555 CTAC-T-G-TTCACCTAAATT-C-----ATCCCC-T-GTTC-C-A---A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              947 33 +     13026 CCAC-T-G-TTCACCGAAATT-C-----ATCCTG-T-GTTC-C-A---A
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  4999 33 -     17153 CTAC-T-G-TTCACCTAAATT-C-----ATCCTC-T-GTTC-C-A---A
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              14572 33 +    111500 CTAC-T-G-TTCACCTAAATT-T-----ATCCTC-T-GTTC-C-A---A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237754 33 + 206538554 CCACTT-G-TTC-CCTAAATT-A-----ACCCTC-T-ATTC-C-A---A
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20196597 33 + 205367284 cCACTT-G-TGC-CCTAAATT-A-----ACCCTC-T-ATTC-C-A---A
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 10350 33 -     36744 CCACTT-G-TTC-CCTAAATT-A-----ACCCTC-T-ATTC-C-A---A
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             851204 30 +   3816255 CCGC-T-T-GTCACCTAAATT-AACT-------C-T-TTT--C-A---A
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg2040                                     427403 13 -    453645 CCAC-T-G-TTCACCT---------------------------------
i Galago_moholi.ctg2040                                  C 0 I 9
s Galago_senegalensis.k141_631886                             5093 13 +     11339 CCAC-T-G-TTCACCT---------------------------------
i Galago_senegalensis.k141_631886                        C 0 I 9
s Galagoides_demidoff.k141_1711393                            2391 13 +     41679 CCAC-T-G-TTCACCT---------------------------------
i Galagoides_demidoff.k141_1711393                       C 0 I 9
s Galeopterus_variegatus.GalVar_scaffold_108840               2002 33 -      9135 CCAC-T-C-TTCTTGTAAATT-A-----ATCCTC-T-GTCC-C-A---C
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     609407 32 -    660261 ccac-t-a-ttcacctcaact-a-----accctc-t-ggac-c-a----
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 I 5
s Gorilla_beringei.k141_3596273                              16887 33 -     32273 CCAC-T-G-TTCACCTAAATT-A-----GCCCTC-T-AATT-C-A---A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186339023 33 + 186649187 CCAC-T-G-TTCACCTAAATT-A-----ACCCTC-T-AATT-C-A---A
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33412 33 +     78134 CCAC-T-A-GTCACCTAAATG-G-----ATCCGT-T-CTT-CT-A---A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 2
s Hapalemur_alaotrensis.k141_170648                           7627 33 -     19426 CCAC-T-G-TTCACCGAAATT-C-----ATCCTC-T-GTTC-C-A---A
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12780 33 -     15286 CCAC-T-G-TTCACCGAAATT-C-----ATCCTC-T-GTTC-C-A---A
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             14419 33 +     18253 CCAC-T-G-TTCACCGAAATT-C-----ATCCTC-T-GTTC-C-A---A
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         14520 33 -     41752 CCAC-T-G-TTCACCGAAATT-C-----ATCCTC-T-GTTC-C-A---A
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         14357 33 -     16460 CCAC-T-G-TTCACCGAAATT-C-----ATCCTC-T-GTTC-C-A---A
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243137 34 +    327341 CCACTT-A-TTGACCTGAATT-A-----ACCCTC-T-ATTC-C-A---A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 11
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18611 32 +     36099 CCAC-T-A-TTCACCTAAACA-A-----ACCCTC-T-GGAC-C-A----
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 I 5
s Heterocephalus_glaber.JH602082.1                        20662960 32 +  22651954 CCAC-T-C-TTCACCTAAATT-AACTGT-----C-T-CTT--C-A---A
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1697 33 +      7595 CCAC-T-G-TTCTTCTGAATT-A-----GCTTTC-T-ATTT-C-C---A
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       111293 33 +   1711038 TCAC-T-A-TCCACCTAAATT-A-----ACCCTC-T-ATTC-C-A---A
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               42724 33 +     43066 TCAC-T-A-TCCACCTAAATT-A-----ACCCTC-T-ATTC-C-A---A
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    435688 33 +    630532 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45839 34 +     55795 CCACTT-A-TTCAGCTGCATT-A-----ACCCTC-T-ATTC-C-A---A
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83857 32 +    135385 CCAC-T-T-TTCACCAAAATC-A-----ACCCCC-T-CTT--C-A---A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7521689 33 -   7955117 CCAC-T-A-TTCACCTAAATG-A-----AGGCCC-T-CTC-CC-A---A
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   23321 26 +     31101 ----------TCACCAAAATT-A-----ATCCTC-T-ATTC-C-A---A
i Indri_indri.k141_3655594                               I 3 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               23369 33 +     23964 CCAC-T-A-TTCACCTAAACT-A-----ACACTC-T-ATGC-C-A---G
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8277948 32 -   9596543 TCAC-T-A-TTCACTTAAATT-A-----ACCCCC-T-CTT--C-A---A
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                2726 33 -      3359 CCAC-T-A-TTCACCTAAACT-A-----ACACTC-T-ATGC-C-A---A
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    17173 33 -     42476 CCAT-T-A-TTCACCTACATT-A-----GCCCTC-T-ATTC-C-A---A
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15524872 33 -  30322482 CCAC-T-G-TTCACCAAAATT-C-----ATCCTC-T-GTTC-C-A---A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        8809 33 +     64341 CCAC-T-A-TTCACCTAAATT-A-----ACCCT-CT-AGTT-C-A---A
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           1149 33 -     35062 CCAC-T-A-TTCACCTAAATT-A-----ACCCT-CT-AGTT-C-A---A
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        8836 33 +     35603 CCAC-T-A-TTCACCTAAATT-A-----ACCCT-CT-AGTT-C-A---A
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    30449 33 +     38576 CCAC-T-C-TTCACCTAAATT-A-----ACCCTC-T-AGTA-C-A---A
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         27153 33 +     66356 CCAC-T-C-TTCACCTAAATT-A-----ACCCTC-T-AGTA-C-A---A
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         11762 33 -     23766 CCAC-T-A-TTCACCTAAATT-A-----ATCCTC-T-ATTC-C-A---A
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29815 33 +     45836 CCAC-T-A-TTCACCTAAATT-A-----ATCCTC-T-ATTC-C-A---A
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          2361 33 +     25010 CCAC-T-A-TTCACCTAAATT-A-----ATCCTC-T-ATTC-C-A---A
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27755 33 +     54090 CCAC-T-A-TTCACCTAAATT-A-----ATCCTC-T-ATTC-C-A---A
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3043859 34 +   3914936 CCACTT-A-TTCATCTAAGTT-A-----ACCCTC-T-ATTC-C-A---A
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     7271 33 -     14121 CCAC-T-A-CTCACCTGAATT-A-----ACTCTG-T-ATTC-C-A---A
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             268420 33 -    662738 CCAC-T-A-TTCACCTAAACT-A-----ATACTC-T-ATGC-C-A---A
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1438039 33 +   1826925 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            6643 13 +     11245 CCAC-T-A-TTCACCT---------------------------------
i Loris_lydekkerianus.k141_2539221                       C 0 I 9
s Loris_tardigradus.ctg83                                  1005464 13 +   6120653 CCAC-T-A-TTCACCT---------------------------------
i Loris_tardigradus.ctg83                                C 0 I 9
s Loxodonta_africana.GL010049.1                            4218155 33 -  43346337 CCAC-T-A-TTCATCTACATT-A-----GCTTCC-T-ATTC-C-A---A
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17956136 34 -  59628241 CCACTT-G-TTCACCTAAATT-A-----ACCCTC-T-ATTC-C-A---A
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               7854 33 +     40492 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59677113 33 +  60120075 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13629 33 -     26193 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            81413 33 -    114318 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  7100 33 -     23192 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16573 33 -     29190 CCAC-T-A-TTTACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  25138 33 +     37952 CCAC-T-A-TTTACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186840227 33 + 187317192 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458790 33 -  25927173 CCAC-T-A-TTTACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  80986 33 +     89720 CCAC-T-A-TTTACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 7987 33 +     20474 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   7787 33 -     14993 CCAC-T-A-TTTACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  330653 33 -    668171 CCAC-T-A-TTTACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 6100 33 -     24072 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26725 33 -     45290 CCAC-T-A-TTTACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91426 33 +     94391 CCAC-T-A-TTCACCAAAATT-A-----ACTCTC-T-ATTC-T-A---A
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23938316 33 -  24302211 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352438 33 +    752769 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              19044 33 +    737560 CCAC-T-G-TTTGTATAAATT-A-----ACCCTC-T-CTTG-T-A---A
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              51030 33 -    317179 CCAC-T-G-TTTGTATAAATT-A-----ACCCTC-T-CTTG-T-A---A
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33103884 33 -  40650429 CCAC-T-A-TTCACCTAAATG-A-----AGGCCC-T-CTC-CC-A---A
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        14161 21 -    207569 CCAC-T-A-TTCACCTAAATT-A-----GC-------------------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10852 34 +     13704 CCACTT-A-TTTACCTAAATT-A-----ACCCTC-T-ATTT-C-A---A
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 8
s Meriones_unguiculatus.MerUng_scaffold_7390                 33536 32 +    140813 CCAC-T-A-TTGACCTGAATT-A-----GCCCCC-T-CTT--C-A---A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12183000 32 -  29670104 CCAC-T-A-TTGACCGAAATT-A-----GGCCCC-A-CAG--C-A---A
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    4037 33 +     10310 CCAC-T-A-TTCACCTAAACT-A-----ACACTC-T-ATGC-C-A---A
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Mico_argentatus.k141_1239457                                6967 32 -      7380 CCAC-T-A-TTCACCTAAATT-A-----ACCCT--T-AGTT-C-A---A
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_schneideri.k141_1950671                                      6940 32 -      7356 CCAC-T-A-TTCACCTAAATT-A-----ACCCT--T-AGTT-C-A---A
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18292299 33 -  93316391 CCAC-T-G-TTAGCCTAAATT-A-----ATCCTC-T-ATTC-G-A---A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    23466 32 -    145209 ccAC-T-A-GTCACTTAAATT-A-----TCTTTT-T--TCC-T-C---A
i Microgale_talazaci.MicTal_scaffold_6613                I 223 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                16448 33 -     19307 CCGC-T-A-TTCACCTAAATT-A-----GCCCTC-T-ATTC-C-A---A
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11261288 32 -  27267610 CCAC-T-A-TTGACCTAAATT-A-----GCCCCC-T-CAG--C-A---A
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1851407 28 +   8254450 -------G-TTCACCCAAATT-A-----GCCCTG-C-ACTG-C-A---A
i Miniopterus_natalensis.LDJU01000034.1                  I 3 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             35087 28 +     64694 -------G-TTCACCCAAATT-A-----GCCCTG-C-ACTG-C-A---A
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 3 C 0
s Miopithecus_ogouensis.k141_534055                          10022 33 -     28506 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6724 34 -      8324 CCACTT-A-TTCATCTAAGTT-A-----ACCCTC-T-ATTC-C-A---A
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      9843 33 -     37649 CCAC-T-G-TTCACCTAAATT-A-----ATCCAC-T-ATTC-C-A---A
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    27542 30 -    437263 CCAC-T-A-TTCACCTAAACT-A-----ACACTC-T-ATGC--------
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 2
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142448 33 -    366855 CCCC-T-A-TTCACCTAAATT-A-----GCCCTC-T-ATGC-C-A---A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   1487 32 +     82753 CCAT-T-A-TTCACCTAAACT-A-----ACCCTC-T-GGAC-C-A----
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 5
s Mungos_mungo.MunMun_flattened_line_23663                   36237 34 +     37127 CCACTT-A-TTGACCTGAATT-A-----ACCCTC-T-ATTC-C-A---A
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 11
s Murina_feae.MurFea_scaffold_85699                           7626 33 +     14753 CCAT-T-A-TTCGCTTAAATT-A-----GCCCTC-T-ATTC-C-A---A
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84362150 32 - 120012414 CCAC-T-A-TTGACCTAAATC-A-----GTCCCA-T-CTT--C-A---A
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87651143 32 - 129401213 CCAC-T-A-TTGACCTAAATT-A-----GTCCCA-T-CTT--C-A---A
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31355803 32 -  89631738 CCAC-T-A-TTGACCTAAATT-A-----GTCCCC-T-CTT--C-A---A
i Mus_pahari.LT608297.1                                  C 0 I 11
s Mus_spretus.CM004101.1                                  90753206 32 - 130317789 CCAC-T-A-TTGACCTAAATT-A-----GTCCCA-T-CTT--C-A---A
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               302264 34 -  14710649 CCACTT-A-TTTACCTAAATT-A-----ACCCTC-T-ATTT-C-A---A
i Mustela_putorius.JH418006.1                            C 0 I 8
s Myocastor_coypus.MyoCoy_scaffold_10123                     71988 27 -     80779 CCTC-T-C-TGCATCTCAGCT-A----------C-C-CAT--A-A---A
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                281266 33 -  10118263 CCAT-T-A-TTTGCCTAAATT-A-----GCCCTC-T-ATTC-C-A---A
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1588522 33 -   6019432 CCAT-T-A-TTTGCCTAAATT-A-----GCCCTC-T-ATTC-C-A---A
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3904618 33 -   4330536 CCAT-T-A-TTTGCCTAAATT-A-----GCCCTC-T-ATTC-C-A---A
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                         769 33 +      1835 CCAT-T-A-TTTGCCTAAATT-A-----GCCCTC-T-ATTC-C-A---A
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 I 117
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190045 33 +    196477 CCAT-T-A-TTCACCAAAATT-A-----ACCCTT-T-GTTT-C-A---A
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2034848 28 -   3037898 CCAC-T-A-TTTTCT-TAATT-A-----GCCCTA-T-CTT---------
i Nannospalax_galili.KL204047.1                          C 0 I 2
s Nasalis_larvatus.k141_413338                               16024 33 +     21681 CCGC-T-G-TTCACCTAAATC-A-----ACCCTC-T-AGTT-C-A---A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308313 34 +  31847680 CCACTT-A-TTCATCTAAGTT-A-----ACCCTC-T-ATTC-C-A---A
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5866498 33 +   7148211 CCAC-T-A-TTCACCTAAACT-A-----ACACTC-T-ATGC-C-A---A
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    758681 31 +    783361 CCAC-T-A-TTCACCTAAATT-A-----GCC--C-T-ATTC-C-A---A
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 9
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150199 33 -   9404916 CCACTT-G-TTCAC-TAAATT-A-----ACCCTC-T-ATTC-C-A---A
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102587009 13 - 196305487 CCAC-T-A-TTCACCT---------------------------------
i Nycticebus_bengalensis.LG01                            C 0 I 9
s Nycticebus_coucang.k141_1127096                              933 13 +      2075 CCAC-T-A-TTCACCT---------------------------------
i Nycticebus_coucang.k141_1127096                        C 0 I 9
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105762364 13 + 199412804 CCAC-T-A-TTCACCT---------------------------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 9
s Ochotona_princeps.JH802162.1                             1364648 34 +   3988456 TCAC-TGA-TTCACTAAAATT-A-----ACCCTG-T-ATTC-C-A---A
i Ochotona_princeps.JH802162.1                           C 0 I 3
s Odobenus_rosmarus.KB229312.1                              507455 34 -   2017862 CCACTT-A-TTCACCTAAGTT-A-----ACCCTC-T-ATTC-C-A---A
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          77324 32 -    150152 ccac-t-a-ttcacctatact-a-----accctc-t-ggac-c-a----
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 5
s Ondatra_zibethicus.OndZib_scaffold_46174                   25942 32 +     28053 CCAC-T-A-TTAACCTAAATT-A-----GCCCCC-T-CAG--C-A---A
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    80978 32 +    102263 CCAC-T-A-TTGACTTAAATT-A-----GCCCCC-T-CTG--C-A---A
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2782421 33 -  10937097 CCAC-T-A-TTCACCTAAACT-A-----ACACTT-T-ATGC-C-G---A
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387              10915 33 -     18566 CCAC-T-C-TTCACCTAAATT-A-----GCCTTC-T-ATCC-C-A---A
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67148130 33 + 174332312 CCAC-T-A-TTCACCTGAATT-A-----ACTCTG-T-ATTC-C-A---A
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       463148 34 -    559221 CCACTT-G-TTCACCTAAATT-A-----ACCCTC-T-ATTC-C-A---A
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         4918 13 +      8798 CCAC-T-G-TTCACCT---------------------------------
i Otolemur_crassicaudatus.k141_222918                    C 0 I 9
s Otolemur_garnettii.GL873799.1                             697080 13 -   1103335 CCAC-T-G-TTCACCT---------------------------------
i Otolemur_garnettii.GL873799.1                          C 0 I 9
s Ovis_aries.CM001607.2                                   17586586 32 +  44047080 CCAC-T-A-TTCACCTAAACA-A-----ACCCTC-T-GGAC-C-A----
i Ovis_aries.CM001607.2                                  C 0 I 5
s Ovis_canadensis.OviCan_scaffold_2572                      174563 32 -    191736 ccac-t-a-ttcacctaaaca-a-----accctc-t-ggac-c-a----
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 I 5
s Pan_paniscus.KQ411613.1                                    44975 33 +     80009 CCAC-T-G-TTCACCTAAATT-A-----ACCCTC-T-AATT-C-A---A
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189143873 33 + 189151597 CCAC-T-G-TTCACCTAAATT-A-----ACCCTC-T-AATT-C-A---A
i Pan_troglodytes.CM009242.2                             I 18 I 42
s Panthera_onca.PanOnc_flattened_line_3271                  151958 33 +    230217 CCACTT-G-TTC-CCTAAATT-A-----ACCCTC-T-ATTC-C-A---A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                265167 33 +  18783137 ccACTT-G-TTC-CCTAAATT-A-----ACCCTC-T-ATTC-C-A---A
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4722047 33 -   8748460 ccACTT-G-TTC-CCTAAATT-A-----ACCCTC-T-ATTC-C-A---A
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1265480 32 -   2937107 CCAG-T-A-TTCATCTAGACA-G-----ACCCTC-T-GGAC-C-A----
i Pantholops_hodgsonii.KE114653.1                        C 0 I 5
s Papio_anubis.CM001495.2                                183444116 33 + 183742232 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7762 33 +     20448 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20564574 33 +  20919399 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6506 33 +     41871 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     9799 33 +     27711 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                   796 33 -     11374 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13458 34 -     78924 CCACTT-A-TTCACCTAAATT-A-----ACCCTC-T-ATTC-C-A---A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           10909 13 +     13100 CCAC-T-G-TTCACCT---------------------------------
i Perodicticus_ibeanus.k141_855320                       C 0 I 9
s Perodicticus_potto.k141_1092580                             9303 13 +     25941 CCAC-T-G-TTCACCT---------------------------------
i Perodicticus_potto.k141_1092580                        C 0 I 9
s Peromyscus_maniculatus.KI615324.1                       18195558 32 -  18517816 CCAC-T-A-TTGACCTACATT-A-----GCCCGC-T-CTG--C-A---A
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28872 30 -     29689 CCAC-T-T-TTTACCTGAATT-AACT-------C-T-CTT--C-A---A
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               9460 33 +     63832 CCAC-T-A-TTCACCTAAACT-A-----ACACTC-T-ATGC-C-A---A
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           44515 33 +     62158 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        39262 33 +     89929 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40678 33 +     51399 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296917 33 -  14605196 CCGC-T-A-TTCACCGAAATC-A-----ACCCTC-T-AGTT-C-A---A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2559 32 +     22620 CTAT-T-A-TTCACCTAAATT-A-----GC-TTC-T-ATTC-C-A---A
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           35166 33 +     35617 CCAC-T-G-TTCACCTAAACT-A-----ACACTC-T-ATGC-C-A---A
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189156629 34 + 189387572 CCAC-T-A-TTCACCTAAATTTA-----ACCCTC-T-AGTT-C-A---A
i Pongo_abelii.CM009266.2                                I 24610 T 24570
s Pongo_pygmaeus.ctg66                                     9571626 33 +   9816681 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Pongo_pygmaeus.ctg66                                   C 0 I 1
s Presbytis_comata.k141_677006                               74199 33 -     81375 CCGC-T-A-TTCACCTAAATC-A-----ACCCTC-T-AGTT-C-A---A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              6020 33 +     19060 CCGC-T-A-TTCACCTAAATC-A-----ACCCTC-T-AGTT-C-A---A
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 14152 33 -     22811 CCAC-T-G-TTCTTCTGAATT-A-----GCTTTC-T-ATTT-C-C---A
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2597552 33 -   4620579 CCAC-T-G-TTCACCGAAATT-C-----ATCCTC-T-GTTC-C-A---A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     991542 26 +   2598838 ----------TCACTGAAATT-A-----ATCCTC-T-ATTC-C-A---A
i Propithecus_coquerelli.NW_012148875.1                  I 3 C 0
s Propithecus_coronatus.k141_347390                          29854 26 +     38485 ----------TCACTGAAATT-A-----ATCCTC-T-ATTC-C-A---A
i Propithecus_coronatus.k141_347390                      I 3 C 0
s Propithecus_diadema.k141_58108                              1896 26 -     13098 ----------TCACTGAAATT-A-----ATCCTC-T-ATTC-C-A---A
i Propithecus_diadema.k141_58108                         I 3 C 0
s Propithecus_edwardsi.k141_1176054                          27375 26 +     35766 ----------TCACTGAAATT-A-----ATCCTC-T-ATTC-C-A---A
i Propithecus_edwardsi.k141_1176054                      I 3 C 0
s Propithecus_perrieri.k141_1200571                           5562 26 -     24134 ----------TCACTGAAATT-A-----ATCCTC-T-ATTC-C-A---A
i Propithecus_perrieri.k141_1200571                      I 3 C 0
s Propithecus_tattersalli.k141_790011                        29387 26 -     67325 ----------TCACTAAAATT-A-----ATCCTC-T-ATTC-C-A---A
i Propithecus_tattersalli.k141_790011                    I 3 C 0
s Propithecus_verreauxi.k141_956661                           5610 26 -      6182 ----------TCACTGAAATT-A-----ATCCTC-T-ATTC-C-A---A
i Propithecus_verreauxi.k141_956661                      I 3 C 0
s Psammomys_obesus.NESX01036370.1                            11182 32 -     21651 CCAC-T-A-TTGACCTGAATT-A-----GCCCCC-T-CTT--C-A---A
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            15957 33 -     21811 CCGC-T-A-TTGACCCACATC-A-----GCCCTC-T-ATTC-C-A---A
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41047 34 +     42204 CCACTT-A-TTTACCTAAATT-A-----ACCCTC-T-ATTG-C-A---A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 8
s Pteropus_alecto.KB030862.1                              22977572 33 +  28871421 ccac-t-a-ttcacttaaatt-a-----actctc-t-attc-c-t---a
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                7625 33 -      8028 CCAC-T-A-TTCACCTAAATT-A-----ACTCTC-T-ATTC-C-A---A
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20275119 33 -  38429054 ccACTT-G-TTC-CCTAAATT-A-----ACCCTC-T-ATTC-C-A---A
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             16006 33 -     91421 CCAC-T-A-TTCACCTAAATC-A-----ACCCTC-T-AGTT-C-A---A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7610126 33 +   7812017 CCGC-T-A-TTCACCTAAATC-A-----ACCCTC-T-AGTT-C-A---A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             16005 33 -     72585 CCGC-T-A-TTCACCTAAATC-A-----ACCCTC-T-AGTT-C-A---A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6063 32 +     55207 ccac-t-a-ttcacctaaact-a-----accctc-t-ggac-c-a----
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 5
s Rattus_norvegicus.chr16                                 53571398 32 +  90668790 CCAC-C-A-TTGACCTAAATT-A-----GCCCCC-A-CTT--C-A---G
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        367781 33 -   3329780 TCAC-T-A-TTCACCTAAACT-A-----ACTCTT-T-ATTC-C-A---A
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             7716 33 -     11128 CCGC-T-A-TTCACCTAAATC-A-----ACCCTC-T-AGTT-C-A---A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91237065 33 - 195417433 CCGC-T-A-TTCACCTAAATC-A-----ACCCTC-T-AGTT-C-A---A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672721 33 +   7961872 CCGC-T-A-TTCACCTAAATC-A-----ACCCTC-T-AGTT-C-A---A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88609 33 -     96226 ccac-t-a-ttcacttaaatt-a-----actctc-t-attc-c-a---g
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_8081                                  2125 33 +     42994 CCAC-T-A-TTCACCTAAATT-A-----ACCCT--CCAGTT-C-A---A
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                              818 33 +      2253 CCAC-T-A-TTCACCTAAATT-A-----ACCCC-CT-AGTT-C-A---A
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               1247 33 -      8737 CCAC-T-A-TTCACCTAAATT-A-----ACCCT-CT-AGTT-C-A---A
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                               900 33 +      2343 CCAC-T-A-TTCACCTAAATT-A-----ACCCT-CT-AGTT-C-A---A
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209475779 33 + 209938924 CCAC-T-A-TTCACCTAAATT-A-----ACCCT--CCAGTT-C-A---A
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                 223 33 -      7576 CCAC-T-A-TTCACCTAAATT-A-----ACCCT-CT-AGTT-C-A---A
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951847 32 - 121099817 CCAC-T-A-TTCACCTAAATT-A-----GCC-TC-T-AGTT-C-A---A
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24189 32 +     46362 CCAC-T-A-TTCACCTAAATT-A-----GCC-TC-T-AGTT-C-A---A
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               24284 32 +     45824 CCAC-T-A-TTCACCTAAATT-A-----GCC-TC-T-AGTT-C-A---A
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             40963 32 -     64574 CCAC-T-A-TTCACCTAAATT-A-----GCC-TC-T-AGTT-C-A---A
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4036 32 -     23631 CCAC-T-A-TTCACCTAAATT-A-----GCC-TC-T-AGTT-C-A---A
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 24180 32 -     61129 CCAC-T-A-TTCACCTAAATT-A-----GCC-TC-T-AGTT-C-A---A
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5421529 33 -   5703754 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          56770 33 -     80660 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    153992 17 -    313613 CCAC-C-A-TTCACTTAAAT-----------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 12
s Semnopithecus_entellus.k141_1672505                          897 33 -     12572 CCAC-T-A-TTCACCTAAATC-A-----ACCCTC-T-AGTT-C-A---A
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27747 33 +     39453 CCGC-T-A-TTCACCTAAATC-A-----ACCCTC-T-AGTT-C-A---A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            8265 33 +     27826 CCGC-T-G-TTCACCTAAATC-A-----ACCCTC-T-AGTT-C-A---A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             7787 33 -     19483 CCGC-T-A-TTCACCTAAATC-A-----ACCCTC-T-AGTT-C-A---A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      1088 33 -     12762 CCAC-T-A-TTCACCTAAATC-A-----ACCCTC-T-AGTT-C-A---A
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                            949 33 +     13763 CCGC-T-A-TTCACCTAAATC-A-----ACCCTC-T-AGTT-C-A---A
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     1091 32 -     30804 CCAC-T-A-TTGACCTAAATT-A-----GCCCCC-T-CTG--C-A---G
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               4553 33 +   1910179 CCAC-C-A-TTTACTGAAATT-A-----ACTACC-T-ATCC-C-A---A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13651797 33 -  18376816 CAAA-T-A-TTCCCCAAAACT-AA----GA-ATC-T-CTCC-C-A---A
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1954742 33 -   3870691 CCAC-T-A-TTCACCTAAATG-A-----AGGCCC-T-CTC-CC-A---A
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             31537 34 +     97271 CCACTT-A-TTCAACTAAGTT-A-----ACCCTC-T-ATTC-C-A---A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              19139 34 -    196729 CCACTT-A-TTGACCAGACTT-A-----ACCCTC-T-ATTC-C-A---A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 11
s Sus_scrofa.JH118708.1                                      37190 33 -     47482 tcac-t-a-tgcacctaaact-a-----atcctc-t-atgc-c-a---a
i Sus_scrofa.JH118708.1                                  I 2586 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                11610 32 +     41958 CCAC-G-C-TTCACCTCAGTG-A-----GCCCTC-T-GCT--C-A---C
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73405 33 +    116680 CCAT-T-A-TTCACCAAAATT-A-----ACCCTT-T-GTTT-C-A---A
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      119568 33 -    156842 CGAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-ATTC-C-A---A
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    388041 33 +    539355 CCAC-T-A-TTCACCTAAATT-A-----ACCCTC-T-ATTC-C-A---A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Theropithecus_gelada.CM009954.1                        186429434 33 + 186847797 CCAC-T-A-TTCGCCTAAATT-A-----ACCCTC-T-AGTT-C-A---A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106169 30 +    114563 ACGT-T-T-TTCACCTAAATT-AACT-------C-T-CTT--C-A---A
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   7178 31 +      8208 CCAC-T-A-TTCACCTAAATC-A-----ATC--C-T-GTTT-C-A---A
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     82004 33 +    610378 TTGT-T-G-TTCACCTAAGTT-A-----GCCCTC-T-ATTC-C-A---A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         11838 33 -     20410 CCGC-T-A-TTCACCTAAATC-A-----ACCCTC-T-AGTT-C-A---A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                       952 33 -     12674 CCGC-T-A-TTCACCTAAATC-A-----ACCCTC-T-AGTT-C-A---A
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       11939 33 +     19930 CCGC-T-A-TTCACCTAAATC-A-----ACCCTC-T-AGTT-C-A---A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       8350 33 -     19997 CCGC-T-A-TTCACCTAAATC-A-----ACCCTC-T-AGTT-C-A---A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48489 33 -     60166 CTGC-T-A-TTCACCTAAATC-A-----ACCCTC-T-AGTT-C-A---A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        15961 33 -     27529 CCAC-T-A-TTCACCTAAATC-A-----ACCCTC-T-AGTT-C-A---A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     15905 33 -     18194 CCGC-T-A-TTCACCTAAATC-A-----ACCCTC-T-AGTT-C-A---A
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9617 33 -     21137 CCGC-T-A-TTCACCTAAATC-A-----ACCCTC-T-AGTT-C-A---A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    8320 33 -     10723 CCGC-T-A-TTCACCTAAATC-A-----ACCCTC-T-AGTT-C-A---A
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7492 33 +      9834 CCGC-T-A-TTCACCTAAATC-A-----ACCCTC-T-AGTT-C-A---A
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        25805 33 +     32220 CCGC-T-A-TTCACCTAAATC-A-----ACCCTC-T-AGTT-C-A---A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5939907 33 +   6242583 CCGC-T-A-TTCACCTAAATC-A-----ACCCTC-T-AGTT-C-A---A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        9158 33 +     20839 CCGC-T-A-TTCACCTAAATC-A-----ACCCTC-T-AGTT-C-A---A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                     186 33 +     27266 CTAC-T-A-GTCACCTACACT-A-----ACCATC-T-GTGC-C-A---A
i Tragulus_javanicus.TraJav_scaffold_40725               N 0 I 233
s Trichechus_manatus.JH594705.1                            4294059 33 +  10818551 CCAC-T-A-TCCATCTAGATC-A-----GCTTTC-T-ATTC-C-A---A
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2156586 33 +   4065304 TCCC-T-G-TTCACCCAAACT-A-----ACCCTC-T-ATTC-C-A---A
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                    10029 33 -     10553 TCCC-T-G-TTCACCCAAACT-A-----ACCCTC-T-ATTC-C-A---A
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15738660 33 +  33153633 ccac-t-a-ttcacctaaact-a-----acactc-t-atgt-c-a---a
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54072 29 -     77625 -----A-A-TTCCTCTAAATT-A-----GCTGGC-A-ATCA-C-A---A
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4851248 33 -   5085361 ccattt-a-ctCACCTAAGTT-A-----ACCCTC-T-ATTC-C-A----
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  12217 33 +     50397 CCAC-T-G-TTCACTGAAATT-C-----ATCCTC-T-GTTC-C-A---G
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             12276 33 +     24756 CCAC-T-G-TTCACTGAAATT-C-----ATCCTC-T-GTTC-C-A---G
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5372568 33 -   5488506 CCACTT-A-CTCACCTAAACC-A-----AC-CTC-T-ATGC-C-A---A
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 11599 34 -     43706 CCACTT-G-TTCACCTAAATT-A-----ACCCTC-T-ATTC-C-A---A
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 13
s Xerus_inauris.XerIna_scaffold_2302                          1875 33 +    224448 CTAC-T-G-TTCACCTAAATG-A-----AGGCCC-T-CTC-CC-A---A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      15677 35 +     63895 TCCA-T-A-TTCTCCTAAATT-A-----GTCCCC-T-CTT--T-GAAGA
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_3601914             15 33 +       295 CCAC-T-A-TTCACCTAAACT-A-----ACACTC-T-ATGC-C-A---A
i Ziphius_cavirostris.ZipCav_flattened_line_3601914      N 0 C 0
e Chiropotes_albinasus.k141_2206961                           1651 303 -     15524 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Tarsius_wallacei.k141_254427                                1877  3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080  3 +     70052 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Glis_glis.GliGli_scaffold_19807                            32063  0 +     49224 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cephalopachus_bancanus.k141_1423433                         6085  3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Carlito_syrichta.NW_007259797.1                           156587  3 -    496798 I
e Arctocebus_calabarensis.k141_2318572                       12167  0 +     14667 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       7665 42 +     62944 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCGAGA-ACG-TGC------TGTG---------T--T-C--GT-------------T-A------C-----------C-TGA
s Acinonyx_jubatus.LLWD01001279.1                           828145 41 -   1699592 A----C----TA-CTCT---G--C----T-----C---T---T---CT---CTTTATA-ACA-TGC------TGTA---------T--T-C--AT-------------T-A------C----------------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 5
s Acomys_cahirinus.AcoCah_scaffold_12655                     71619 43 +     87051 A----C----T-----AGCTA--CT---T-----C---T---T---TT---CTTAAGA-ATA-TAG------TGTG---------T--T-C--AT-------------T-A------T-----------T-T--
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511421 40 -  29979442 G----C----TA-CCCT---A--T----T-----C---T---T---CT---CC-TAGA-ACA-TGC------TGTA---------T--C-C--AT-------------T-A------C----------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 5
s Ailurus_fulgens.LNAC01001112.1                             80156 41 -    347723 A----C----TA-CCCT---A--T----T-----C---T---T---CT---CTTTAGA-ACA-CGC------TATA---------T--c-c--at-------------t-a------a----------------
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 5
s Allactaga_bullata.AllBul_scaffold_9566                     75326 44 -     89534 A----C----T-----A---G--CTCTTT-----C---A---T---AT---CTCCAGA-ATA-TAC------AGTA---------T--G-C--AT-------------T-A------TA----------C-A--
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 2
s Allenopithecus_nigroviridis.k141_3361533                   15594 42 -     52922 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15514 42 -     28001 A----C----T-----A---G--CT---T-----A---T---T---TG---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          6012 42 -     18505 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAGGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           6864 42 -     12518 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAGGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              8437 42 +     51355 A----C----C-----A---C--AT---T-----A---T---T---CT---CTCGAGA-ATG-TGC------TGTG---------T--T-T--GT-------------T-A------C-----------C-TGA
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                1546 42 -     36483 A----C----C-----A---C--AT---T-----A---T---T---CT---CTCGAGA-ATG-TGC------TGTG---------T--T-T--GT-------------T-A------C-----------C-TGA
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              11998 42 +     28687 A----C----C-----A---C--AT---T-----A---T---T---CT---CTCGAGA-ATG-TGC------TGTG---------T--T-T--GT-------------T-A------C-----------C-TGA
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                  511 42 +     27940 A----C----C-----A---C--AT---T-----A---T---T---CT---CTCGAGA-ATG-TGC------TGTG---------T--T-T--GT-------------T-A------C-----------C-TGA
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            1555 42 -      9457 A----C----C-----A---C--AT---T-----A---T---T---CT---CTCGAGA-ATG-TGC------TGTG---------T--T-T--GT-------------T-A------C-----------C-TGA
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                              511 42 +     30492 A----C----C-----A---C--AT---T-----A---T---T---CT---CTCGAGA-ATG-TGC------TGTG---------T--T-T--GT-------------T-A------C-----------C-TGA
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              4506 42 +     47717 A----C----C-----A---C--AT---T-----A---T---T---CT---CTCGAGA-ATG-TGC------TGTG---------T--T-T--GT-------------T-A------C-----------C-TGA
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              1238 42 +      5663 A----C----C-----A---C--AT---T-----A---T---T---CT---CTCGAGA-ATG-TGC------TGTG---------T--T-T--GT-------------T-A------C-----------C-TGA
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             15690 42 +     50774 A----C----C-----A---C--AT---T-----A---T---T---CT---CTCGAGA-ATG-TGC------TGTG---------T--T-T--GT-------------T-A------C-----------C-TGA
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          676324 39 -   2318259 A----C----C-----T---G--G----T-----A---T---T---TT---TTCTAGA-ACG-TAC------TGTG---------C--T-C--AT-------------T-C------C-----------T-C--
i Ammotragus_lervia.NIVO01071767.1                       I 5 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      186187 46 +    412891 A----C----T---T-G---G-CC----TATTCTA---T---T---CC---CTCTAGA-ATA-TTC------TGTG---------T--T-C--AT-------------T-G------C-----------T-C--
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             98804 39 -    100397 G----C----C-----T---G--C----T-----A---T---T---TT---CTCTAGA-ACA-TGC------TGAG---------C--T-C--TT-------------T-C------C-----------T-C--
i Antilocapra_americana.AntAmePen_scaffold_12469         I 5 C 0
s Aotus_azarae.k141_3104676                                  16679 42 -     33861 A----C----C-----A---C--AT---T-----A---T---T---CT---CTCAAGA-ATG-TGC------TGTG---------T--T-T--GT-------------T-A------C-----------C-TGA
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            16676 42 -     34016 A----C----C-----A---C--AT---T-----A---T---T---CT---CTCAAGA-ATG-TGC------TGTG---------T--T-T--GT-------------T-A------C-----------C-TGA
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299103 42 -   5030052 A----C----C-----A---C--AT---T-----A---T---T---CT---CTCAAGA-ATG-TGC------TGTG---------T--T-T--GT-------------T-A------C-----------C-TGA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             16712 42 -     34685 A----C----C-----A---C--AT---T-----A---T---T---CT---CTCAAGA-ATG-TGC------TGTG---------T--T-T--GT-------------T-A------C-----------C-TGA
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               29837 42 -     47192 A----C----C-----A---C--AT---T-----A---T---T---CT---CTCAAGA-ATG-TGC------TGTG---------T--T-T--GT-------------T-A------C-----------C-TGA
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13440 44 +     20879 A----C----T-----A---G--CT---T-----A---C---TCATCT---CTCAAAA-ATA-TAC------AGTG---------T--T-C--AT-------------TAT------T-----------C-T--
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5577 40 +     43469 A----C----T-----G---G-CC----T-----A---T---T---CT---CTCTAGA-ATA-TGC------TGTG---------T--T-C--AT-------------T-G------C-----------T-C--
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  54525 43 -     92717 A----C----T-----A---G--TC---T-----ATTCT---T---CT---CTCAAGA-ACA-TGC------TATA---------T--T-C--AT-------------T-A------C-----------C-C--
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              55156 43 +     85213 A----C----T-----A---G--TC---T-----ATTCT---T---CT---CTCAAGA-ACA-TGC------TATA---------T--T-C--AT-------------T-A------C-----------C-C--
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15192549 43 +  23207421 A----ATAGCC-----T---A--T----T-----G---T---T---CT---CTCTAGA-ACA-TGC------TGTG---------T--T-C--AT-------------T-C------C-----------T-C--
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         3014 43 -     18090 A----ATAGCC-----T---A--T----T-----G---T---T---CT---CTCTAGA-ACA-TGC------TGTG---------T--T-C--AT-------------T-C------C-----------T-C--
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    27247 38 +     34529 G----C----C-----T---G--G----T-----A---T---T---T----TTCTAGA-ACG-TGC------TGTG---------C--T-C--AT-------------T-C------T-----------T-C--
i Beatragus_hunteri.BeaHun_scaffold_50177                I 5 C 0
s Bison_bison.KN261452.1                                    200303 40 -    288883 g----c----c-----t---g--g----t-----a---t---t--ttt---ctctaga-acg-tgc------tgtg---------c--c-c--at-------------t-c------c-----------t-c--
i Bison_bison.KN261452.1                                 I 5 C 0
s Bos_indicus.CM003047.1                                  20273508 39 +  48749331 g----c----c-----t---g--g----t-----a---t---t---tt---ctctaga-acg-tgc------tgtg---------c--n-c--at-------------t-c------c-----------t-c--
i Bos_indicus.CM003047.1                                 I 37 I 83
s Bos_mutus.JH880303.1                                     1126064 39 -   1948126 g----c----c-----t---g--g----t-----a---t---t---tt---ctctaga-acg-tgc------tgtg---------c--c-c--at-------------t-c------c-----------t-c--
i Bos_mutus.JH880303.1                                   I 5 C 0
s Bos_taurus.CM000203.6                                   18084146 39 +  45695690 g----c----c-----t---g--g----t-----a---t---t---tt---ctctaga-acg-tgc------tgtg---------c--c-c--at-------------t-c------c-----------t-c--
i Bos_taurus.CM000203.6                                  I 37 I 83
s Bubalus_bubalis.KI419123.1                               2819814 39 +   4408762 g----c----c-----t---g--g----t-----a---t---t---tt---ctctgga-acg-tac------tgtg---------c--t-c--at-------------t-c------c-----------t-c--
i Bubalus_bubalis.KI419123.1                             I 5 C 0
s Callibella_humilis.k141_1278103                             6563 42 -     10423 A----C----G-----T---C--AT---T-----A---T---T---CT---CTCAAGA-ATG-TGC--------TG---------TGTT-T--GT-------------T-A------C-----------C-TGA
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callithrix_geoffroyi.k119_69176                              402 42 +      5377 A----C----C-----T---C--AT---T-----A---T---T---CT---CTCAAGA-ATG-TGC--------TG---------TGTT-T--GT-------------T-A------C-----------C-TGA
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592263 42 - 189096842 A----C----C-----T---C--AT---T-----A---T---T---CT---CTCAAGA-GTG-TGC--------TG---------TGTT-T--GT-------------T-A------C-----------C-TGA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1077 42 -     12329 A----C----C-----T---C--AT---T-----A---T---T---CT---CTCAAGA-ATG-TGC--------TG---------TGTT-T--GT-------------T-A------C-----------C-TGA
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10003068 49 -  17673402 AGTAGC----C-----T---A--C----T-----A---T---T---CT---CTCTAGA-GCA-CGC------TGtg---------t--t-c--cc-------------c-ccccaccc-----------c-c--
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2335544 49 -   7040546 AGTAGC----C-----T---A--T----T-----A---T---T---CT---CTCTAGA-GCA-CGC------Tgtg---------t--c-c--cc-------------c-ccccaccc-----------c-c--
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  403841 51 -   1652518 AGTAGC----C-----T---A--T----T-----A---T---T---CT---CTCTAGA-GCA-CAC------TGtg---------t--t-c--cc-----------ccc-ccccaccc-----------c-c--
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17800011 41 -  60362399 A----C----TA-CCCA---A--T----T-----C---T---T---CT---CTTTAGA-ACA-TGC------TATA---------T--C-C--AT-------------T-A------C----------------
i CanFam4.chr16                                          C 0 I 5
s Canis_lupus_VD.CanFam_VD_scaffold_27089                      759 41 -     43241 A----C----TA-CCCA---A--T----T-----C---T---T---CT---CTTTAGA-ACA-TGC------TATA---------T--C-C--AT-------------T-A------C----------------
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 I 5
s Canis_lupus_dingo.QKWQ01000480.1                         9035454 41 -   9314153 A----C----TA-CCCA---A--T----T-----C---T---T---CT---CTTTAGA-ACA-TGC------TATA---------T--C-C--AT-------------T-A------C----------------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 5
s Canis_lupus_familiaris.chr16                            17959930 41 -  59632846 A----C----TA-CCCA---A--T----T-----C---T---T---CT---CTTTAGA-ACA-TGC------TATA---------T--C-C--AT-------------T-A------C----------------
i Canis_lupus_familiaris.chr16                           C 0 I 5
s Canis_lupus_orion.HG994398.1                            18501227 41 +  63665305 A----C----TA-CCCA---A--T----T-----C---T---T---CT---CTTTAGA-ACA-TGC------TATA---------T--C-C--AT-------------T-A------C----------------
i Canis_lupus_orion.HG994398.1                           C 0 I 5
s Capra_aegagrus.CM003241.1                               18830442 39 +  46296322 A----C----C-----T---G--G----T-----A---T---T---TT---TTCTAGA-ACG-TAC------TGTG---------C--T-C--AT-------------T-C------C-----------T-C--
i Capra_aegagrus.CM003241.1                              I 5 C 0
s Capra_hircus.CM004588.1                                 18061162 39 -  44709034 A----C----C-----T---G--G----T-----A---T---T---TT---TTCTAGA-ACG-TAC------TGTG---------C--T-C--AT-------------T-C------C-----------T-C--
i Capra_hircus.CM004588.1                                I 5 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1827 42 -     12242 A----C----T-----A---CTGCT---T-----T---T---T---CT---TTCCAGT-ACT-TTC------CATG---------C--T-C--GG-------------T-A------C-----------C-T--
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                5944 40 -     11696 A----C----T-----G---G-CC----T-----A---T---T---AT---CTCTAGA-ATA-TGC------TGTG---------T--T-C--AT-------------T-A------C-----------T-C--
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    137938 38 +    179628 A----C----T-----A---G--AT---T-----A---T---T---CT---CTCCAGA-TCA-T----------TA---------C--T-C--AA---C-A-------T-G------c-----------c-t--
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 188
s Catagonus_wagneri.CatWag_scaffold_2839                     94365 43 +    217609 A----C----TAGCT-G---A--T----T-----A---T---T---AT---CTCTAAA-ACA-GGC------TATG---------T--T-C--AT-------------T-C------T-----------C-C--
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                         11003 42 -     11392 A----C----C-----T---C--AT---T-----A---T---T---CT---CTCAAGA-ATG-TGC--------TG---------TGTT-T--GT-------------T-G------C-----------C-TGA
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               7187 42 -      7577 A----C----C-----T---C--AT---T-----A---T---T---CT---CTCAAGA-ATG-TGC--------TG---------TGTT-T--GT-------------T-A------C-----------C-TGA
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25653608 42 +  26074798 A----C----C-----A---C--AT---T-----A---T---T---CT---CTCAAGA-ATG-TGC------TGAC---------A--T-T--GT-------------T-A------C-----------C-TGA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                1546 42 +     28840 A----C----C-----A---C--AT---T-----A---T---T---CT---CTCAAGA-ATG-TGC------TGAC---------A--T-T--GT-------------T-A------C-----------C-TGA
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 1275 42 +     14051 A----C----C-----A---C--AT---T-----A---T---T---CT---CTCAAGA-ATG-TGC------TGAC---------A--T-T--GT-------------T-A------C-----------C-TGA
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Ceratotherium_simum.JH767749.1                          12232292 43 +  27778364 a----c----ta-gctt---c--t----t-----c---t---t---ct---ctctaga-aca-tgc------tgtg---------t--t-c--at-------------t-a------c-----------c-c--
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3319 43 -     25243 A----C----TAGCT-T---C--T----T-----C---T---T---CT---CTCTAGA-ACA-TGC------TGTG---------T--T-C--AT-------------T-A------C-----------C-C--
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4476529 42 +   4669795 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        1031 42 +     17872 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           1688 42 -     14043 A----C----T-----A---G--CT---T-----G---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9721 42 +     27781 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         9889 42 -     20310 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          12869 42 +     29689 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7615 42 -     20078 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          15537 42 -     27936 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            4403 42 -     17152 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38817948 42 +  39242232 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-AAT-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223637 42 -  21565898 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40756 42 -     53127 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        1007 42 +     13442 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-AAT-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15556 42 -     27947 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ATG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         15532 42 +     17596 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          1575 42 +     14005 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACA-TGC------TATG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1319 40 -      8501 A----C----T-----A---G--CC---T-----G---T---T---CT---CTCCAGA-ACA-TGC------TGTG---------T--T-C--AT-------------C-A------C-----------C-C--
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             21905 43 -     52598 A----C----T-----A---G--CC---T-----ATTCT---T---CT---CTCAAGA-ACA-TTC------TATA---------T--T-C--AT-------------T-A------C-----------C-C--
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           17276 43 +     57038 A----C----T-----A---G--CC---T-----ATTCT---T---CT---CTCAAGA-ACG-TTC------TATA---------T--T-C--AT-------------T-A------C-----------C-C--
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1253702 42 +   2543920 A----C----T-----A---CTGCT---T-----C---T---T---CT---CTCCAAA-ACT-TTC------CATG---------T--T-C--TT-------------T-G------C-----------C-T--
i Chinchilla_lanigera.JH722012.1                         I 7 C 0
s Chlorocebus_aethiops.ctg25                              18429516 42 -  18827391 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15952 42 -     50209 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422953 42 + 135778131 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 19137 41 +     19366 A----C----T-----A---C--CC---A-----G---T---T---CT---CTCCAGAAACA-GGC------TGTG---------T--T-C--AT-------------T-A------A-----------C-T--
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            174211 41 +    839153 A----C----T-----A---C--CC---A-----G---T---T---CT---CTCCAGAAATA-GGC------TGTG---------T--T-C--AT-------------T-A------A-----------C-T--
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1911429 42 +   2368649 A----G----T-----A---G--CT---T-----G---T---T---CT---CTCAAGA-ACT-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949681 42 + 200372422 A----G----T-----A---G--CT---T-----G---T---T---CT---CTCAAGA-ACT-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              37963 42 +     84244 A----G----T-----A---G--CT---T-----G---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17548881 53 -  53390261 A----C----T-----C---A--C----T-----AGTTT---T---CT---CTCAAGA-ACA-CAT------TGTG---------C--T-C--AT-------------T-A-----ATACACAC-ACATC-C--
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1300 40 +     23735 A----T----T-----T---G-CC----T-----A---T---T---CT---CTTTAGA-ACA-TGC------TGTG---------T--T-C--AT-------------T-A------C-----------T-C--
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 50857 43 +     63868 A----C----T-----GGTTT--AA---T-----C---T---T---TT---CTTGAGA-ATA-TAA------TGTG---------T--C-C--AT-------------T-A------T-----------T-T--
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11668370 43 + 224834208 A----C----T-----AGTTA--AT---T-----C---T---T---TT---CTTGAGA-ATA-TAG------TGTG---------T--T-C--AT-------------T-A------C-----------T-T--
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               3786 38 -     19598 A----C----T-----G---G--C----T-----A---T---T---CT---CTCAAGA-ACA-TTA------TGTG---------C--T-T--AC-------------T-A-----CC----------------
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29344 27 -     87169 ----------------------------------------------CT---CTTTAGA-ACG-TGC------TGTA---------T--T-A--TT-------------T-A------C----------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 11 I 5
s Ctenodactylus_gundi.CteGun_scaffold_65                    837926 15 +   1526836 -----------------------------------------------------------------C------TGTA---------T--T-C--AT-------------T-T------C-----------C-T--
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 11 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  36696 42 +     51376 A----C----T-----A---CTGCT---T-----C---T---T---CT---TTCCAGC-ACT-TTC------CAGG---------T--T-C--AT-------------T-G------C-----------C-T--
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            64337 40 +   2246927 A----C----T-----A---G--CC---C-----G---T---T---CT---CTCCAGA-ACA-TGC------TGTG---------T--T-T--AT-------------T-A------C-----------C-C--
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12538109 40 -  12879189 A----C----T-----A---G--CC---T-----A---T---T---CT---CTCAAGA-ACA-TGC------TATG---------T--T-C--AT-------------T-A------C-----------C-C--
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16812185 43 +  35494412 A----AGAGCC-----T---A--T----T-----A---T---T---CT---CTCTAGT-ACA-TGC------TGTG---------T--T-C--AT-------------T-C------C-----------T-C--
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630940 40 +  20541912 A----C----T-----A---G-CC----T-----G---T---T---CT---CTCTAGA-ATA-TGC------TGTG---------T--T-C--AT-------------T-G------C-----------T-C--
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  674141 43 +   1390856 a----c----ta-gctt---c--t----t-----c---t---t---ct---ctctaga-aca-tgc------tatg---------t--t-c--at-------------t-a------c-----------c-c--
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6892 43 +    198055 a----c----ta-gctt---c--t----t-----c---t---t---ct---ctctaaa-aca-tgc------TGTG---------T--T-C--AT-------------T-A------C-----------C-C--
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37181 42 +     67921 A----C----T-----A---CTGCT---T-----C---T---T---CT---CTCCAAA-CCT-TTC------CATG---------T--T-C--AT-------------T-G------C-----------C-T--
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Echinops_telfairi.JH980293.1                            48781593 41 + 111700974 A----T----G-----A---G--CA---T-----A---T---T---CA---TTCTAAA-ACA-CAC------TGTG---------C--T-C--AT-------------T-A------C-----------TCC--
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.KE759718.1                                  11365 43 +     11740 a----c----t-----a---g-tc----t-----a---ttctt---ct---ctctaga-aca-tat------ggtg---------t--t-c--at-------------t-a------c-----------c-c--
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       311479 39 +    607251 g----c----c-----t---g--g----g-----a---t---t---tt---ctctaga-aca-cgc------tgtg---------c--t-c--at-------------t-c------c-----------g-c--
i Elaphurus_davidianus.JRFZ01104969.1                    I 5 C 0
s Elephantulus_edwardii.JH947257.1                         1098564 14 +  10337057 --------------------------------------T---T---CT---TTCTAAA-ATG------------------------------------------------------------------------
i Elephantulus_edwardii.JH947257.1                       I 8 I 11
s Ellobius_lutescens.LOEQ01008920.1                          21341 43 -    110024 A----C----C-----AGCTA--AT---T-----C---T---T---TT---CTTGAGA-ATA-TAG------TGCA---------T--T-C--AT-------------T-A------T-----------T-T--
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                            1247 43 +      8657 A----C----C-----AGCTA--AT---T-----C---T---T---TT---CTTGAGA-ATA-TAG------TGCA---------T--T-C--AT-------------T-A------T-----------T-T--
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16330154 32 -  41312741 -----------------------T----T-----C---T---T---CT---CTTTAGC-ACA-TGC------TGTA---------T--C-C--AT-------------T-A------C----------------
i Enhydra_lutris.KZ291758.1                              I 8 I 5
s Eptesicus_fuscus.JH977646.1                              2146556 40 -  14770903 A----G----T-----A---G-CC----T-----G---T---T---CC---TTCTAGT-ACA-TGC------TGAG---------T--T-C--AT-------------T-A------C-----------T-C--
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1284401 42 +   4378816 A----C----TA-GCCT---A--T----T-----C---T---T---CT---CTCTAGA-ACA-TGC------TGTG---------T--T-C--AT-------------T-A------C-----------C----
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18532221 42 -  39960074 A----C----TA-GCCT---A--T----G-----C---T---T---CT---CTCTAGA-ACA-TGC------TGTG---------T--T-C--AT-------------T-A------C-----------C----
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               34250 42 +    498745 A----C----TA-GCCT---A--T----G-----C---T---T---CT---CTCTAGA-ACA-TGC------TGTG---------T--T-C--AT-------------T-A------C-----------C----
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3329080 52 -   7059049 C----C----A---GGC---A--T----T-----C---T---T---TT---CTCTTGA-ACATGAT------TGGG---------C--T-T--GT-------------C-A-----TC-CAC-CTACCCC-C--
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21206121 42 -  21539334 A----T----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11861 43 +    133382 a----atagcc-----t---a--t----t-----g---t---t---ct---ctctaga-aca-tgc------tgtg---------t--t-c--at-------------t-c------c-----------t-c--
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             25798 43 -     44125 A----ATCGCC-----T---A--T----T-----A---T---T---CT---CTCTAGA-ACA-TGC------TGTG---------T--T-C--AT-------------T-C------C-----------T-C--
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Eulemur_albifrons.k141_576796                              40952 43 -     44621 A----C----T-----A---G--CC---T-----ATTCT---T---CA---CTCAAGA-GCA-TGC------TATA---------T--T-C--AT-------------T-A------C-----------C-C--
i Eulemur_albifrons.k141_576796                          C 0 C 0
s Eulemur_collaris.k141_377015                                7333 43 -     16928 A----C----T-----A---G--CC---T-----ATTCT---T---CA---CTCAAGA-GCA-TGC------TATA---------T--T-C--AT-------------T-A------C-----------C-C--
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              16365 43 -     25546 A----C----T-----A---G--CC---T-----ATTCT---T---CA---CTCAAGA-GCA-TGC------TATA---------T--T-C--AT-------------T-A------C-----------C-C--
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            13561 43 +     26330 A----C----T-----A---G--CC---T-----ATTCT---T---CA---CTCAAGA-GCA-TGC------TATA---------T--T-C--AT-------------T-A------C-----------C-C--
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14796 43 +     23973 A----C----T-----A---G--CC---T-----ATTCT---T---CA---CTTAAGA-GCA-TGC------TATA---------T--T-C--AT-------------T-A------C-----------C-C--
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                13558 43 +     75513 A----C----T-----A---G--CC---T-----ATTCT---T---CA---CTCAAGA-GCA-TGC------TATA---------T--T-C--AT-------------T-A------C-----------C-C--
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 11488 43 +     97555 A----C----T-----A---G--CC---T-----ATAGT---T---CA---CTCAAGA-GCA-TGC------TATA---------T--T-C--AT-------------T-A------T-----------C-C--
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                              980 43 +     13026 A----C----T-----A---G--CC---T-----ATTCT---T---CA---CTCAAGA-GCA-TAC------TATA---------T--T-C--AT-------------T-A------C-----------C-C--
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  5032 43 -     17153 A----C----T-----A---G--CC---T-----ATTCT---T---CA---CTCAAGA-GCA-TGC------TATA---------T--T-C--AT-------------T-A------C-----------C-C--
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              14605 43 +    111500 A----C----T-----A---G--CC---T-----ATTCT---T---CA---CTCAAGA-GCA-TGC------TATA---------T--T-C--AT-------------T-A------C-----------C-C--
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237787 41 + 206538554 A----C----TA-CTCT---G--C----T-----C---T---T---CT---CTTTATA-ACA-TGC------TGTA---------T--T-C--AT-------------T-A------C----------------
i Felis_catus.CM001381.2                                 C 0 I 5
s Felis_catus_fca126.CM031415.1                           20196630 41 + 205367284 A----C----TA-CTCT---G--C----T-----C---T---T---CT---CTTTATA-ACA-TGC------TGTA---------T--T-C--AT-------------T-A------C----------------
i Felis_catus_fca126.CM031415.1                          C 0 I 5
s Felis_nigripes.FelNig_flattened_line_20823                 10383 41 -     36744 A----C----TA-CTCT---G--C----T-----C---T---T---CT---CTTTATA-ACA-TGC------TGTA---------T--T-C--AT-------------T-A------C----------------
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 5
s Fukomys_damarensis.KN121974.1                             851234 42 +   3816255 A----C----T-----A---CTGCC---T-----C---T---T---CT---CTCCAGA-GCA-TTC------CATG---------T--T-C--AT-------------G-G------C-----------C-T--
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg2040                                     427425 37 -    453645 A----C----T-----A---G--CC---T-----G---T---T---CT---CTT---A-ACA-TTC------TGTG---------T--T-T--AT-------------C-A------C-----------C-T--
i Galago_moholi.ctg2040                                  I 9 C 0
s Galago_senegalensis.k141_631886                             5115 37 +     11339 A----C----T-----A---G--CC---T-----G---T---T---CT---CTT---A-ACA-TTC------TGTG---------T--T-T--AT-------------C-A------C-----------C-C--
i Galago_senegalensis.k141_631886                        I 9 C 0
s Galagoides_demidoff.k141_1711393                            2413 37 +     41679 A----C----T-----A---G--CC---T-----G---T---T---CT---CTT---A-ACA-TTC------TGTG---------T--T-C--AT-------------C-A------C-----------C-C--
i Galagoides_demidoff.k141_1711393                       I 9 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               2035 43 -      9135 A----C----T-----T---G--CT---T-----A---T---T---CTTCTCTTGAGA-ACA-TGC------TGTG---------T--T-C--AT-------------G-A------C-----------C-G--
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     609444 39 -    660261 g----c----c-----t---g--c----t-----a---t---t---tt---ctctaga-ata-tgc------tgtg---------c--t-c--tt-------------t-c------c-----------t-c--
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 5 C 0
s Gorilla_beringei.k141_3596273                              16920 42 -     32273 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCGAGA-ACG-TGC------TGTG---------T--T-C--GT-------------T-A------C-----------C-TGA
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186339056 42 + 186649187 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCGAGA-ACG-TGC------TGTG---------T--T-C--GT-------------T-A------C-----------C-TGA
i Gorilla_gorilla.LT578341.1                             C 0 I 29
s Graphiurus_murinus.GraMur_scaffold_10447                   33447 38 +     78134 ----------------G---A--AT---C-----T---T---T---CT---CTCTAGA-ACA-TAC------TGCA---------T--T-C--AT-------------TAG------T-----------C-T--
i Graphiurus_murinus.GraMur_scaffold_10447               I 2 C 0
s Hapalemur_alaotrensis.k141_170648                           7660 43 -     19426 A----C----T-----A---G--CC---T-----GTTCT---T---CA---CTCAAGA-GCA-TGC------TATA---------T--T-C--AT-------------T-A------C-----------C-C--
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12813 43 -     15286 A----C----T-----A---G--CC---T-----ATTCT---T---CA---CTCAAGA-GCA-TGC------TATA---------T--T-C--AT-------------T-A------C-----------C-C--
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             14452 43 +     18253 A----C----T-----A---G--CC---T-----ATTCT---T---CA---CTCAAGA-GCA-TGC------TATA---------T--T-C--AT-------------T-A------C-----------C-C--
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         14553 43 -     41752 A----C----T-----A---G--CC---T-----ATTCT---T---CA---CTCAAGA-GCA-TGC------TATA---------T--T-C--AT-------------T-A------C-----------C-C--
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         14390 43 -     16460 A----C----T-----A---G--CC---T-----ATTCT---T---CA---CTCAAGA-GCA-TGC------TATA---------T--T-C--AT-------------T-A------C-----------C-C--
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243182 27 +    327341 ----------------------------------------------CT---CTTTAGA-ACA-TGC------TGTA---------T--T-A--TT-------------T-A------C----------------
i Helogale_parvula.HelPar_flattened_line_2585            I 11 I 5
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18648 39 +     36099 G----C----C-----T---G--G----T-----A---T---T---TT---TTCTAGA-ACA-TAC------TGTG---------C--T-C--AT-------------T-C------C-----------T-C--
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 5 C 0
s Heterocephalus_glaber.JH602082.1                        20662992 42 +  22651954 A----C----T-----A---CTGCT---T-----C---T---T---CT---CTCCAGA-ACA-TTC------CATG---------T--T-C--AT-------------T-G------C-----------T-T--
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1730 39 +      7595 A----C----T-----A---A--A----T-----G---C---T---CC---TTCTAGA-ACA-TGC------TGTG---------C--T-A--AT-------------C-A------C-----------C-C--
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       111326 43 +   1711038 A----T----T-----A---GT-G----T-----A---TTCTC---TT---CTCTAGA-ACA-TTC------TGTG---------T--T-C--AA-------------T-A------C-----------C-C--
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               42757 43 +     43066 A----T----T-----A---GT-G----T-----A---TTCTC---TT---CTCTAGA-ACA-TTC------TGTG---------T--T-C--AA-------------T-A------C-----------C-C--
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    435721 42 +    630532 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCGAGA-ATG-TGC------TGTG---------T--T-T--GT-------------T-A------C-----------C-TGA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45873 41 +     55795 A----C----TA-CCCT---G--T----T-----C---T---T---CT---CTTTAGA-ACA-TGC------TGTA---------T--T-C--TT-------------T-A------C----------------
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 5
s Hystrix_cristata.HysCri_scaffold_5660                      83889 39 +    135385 A----C----T-----G---C---G---T-----C---T---T---CT---CTCCAAA-ACA-TCC------TGTG---------T--T-C--AC-------------T-G------C-----------C-C--
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7521722 41 -   7955117 A----C----T-----A---G--CT---T-----A---T---T---CT---CTTCAGA-ATA-TAA------TATG---------T--T-C--AT-------------TAT------T-----------T-C--
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   23347 43 +     31101 A----C----T-----A---G--CC---T-----ATTCT---T---CT---CTCAAGA-ACA-TGC------TGTA---------T--T-C--AT-------------T-A------T-----------C-C--
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               23402 43 +     23964 A----ATAGCC-----T---A--T----T-----A---T---T---CT---CCCCACT-ACA-TAC------TGTG---------T--T-C--AT-------------T-C------C-----------T-C--
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8277980 44 -   9596543 A----C----T-----A---T--TTCTTT-----C---A---T---AC---CTCCAGA-ATA-TAT------AGTA---------T--G-T--AT-------------T-A------TA----------C-A--
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                2759 43 -      3359 A----ATAGCC-----T---A--T----T-----A---T---T---CT---CCCAAGA-ACA-TGC------TGTG---------T--T-C--AT-------------T-C------C-----------T-C--
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    17206 40 -     42476 A----G----T-----A---G-CC----T-----G---T---T---CT---CTGTAGT-ACA-TGC------TGAG---------T--T-C--AT-------------T-A------C-----------T-C--
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 38
s Lemur_catta.scaffold_24                                 15524905 43 -  30322482 A----C----T-----A---G--CC---T-----ATTCT---T---CA---CTCAAGA-GCA-TGC------TATA---------T--T-C--AT-------------T-A------C-----------C-C--
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        8842 42 +     64341 A----C----C-----A---C--TT---C-----A---T---T---CT---CTCAAGA-ATG-TTC------TGTG---------T--T-T--GT-------------T-A------C-----------C-TGA
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           1182 42 -     35062 A----C----C-----A---C--TT---C-----A---T---T---CT---CTCAAGA-ATG-TTC------TGTG---------T--T-T--GT-------------T-A------C-----------C-TGA
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        8869 42 +     35603 A----C----C-----A---C--TT---C-----A---T---T---CT---CTCAAGA-ATG-TGC------TGTG---------T--T-T--GT-------------T-A------C-----------C-TGA
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    30482 42 +     38576 A----C----C-----T---C--AT---T-----A---T---T---CT---CTCAAGA-ATG-TGC--------TG---------T--G-TTAGT-------------T-A------C-----------C-TGA
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         27186 42 +     66356 A----C----C-----T---C--AT---T-----A---T---T---CT---CTCAAGA-ATG-TGC--------TG---------T--G-TTAGT-------------T-A------C-----------C-TGA
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         11795 43 -     23766 A----C----T-----A---G--CC---T-----ATTCT---T---GT---CTCAAGA-ACA-TGC------TGTA---------T--T-C--AT-------------T-A------C-----------C-C--
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29848 43 +     45836 A----C----T-----A---G--CC---T-----ATTCT---T---CT---CTCAAGA-ACA-TGC------TGTA---------T--T-C--AT-------------T-A------C-----------C-C--
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          2394 43 +     25010 A----C----T-----A---G--CC---T-----ATTCT---T---GT---CGCAAGA-ACA-TGC------TGTA---------T--T-C--AT-------------T-A------C-----------C-C--
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27788 43 +     54090 A----C----T-----A---G--CC---T-----ATTCT---T---CT---CTCAAGA-ACA-TGC------TGTA---------T--T-C--AT-------------T-A------C-----------C-C--
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3043893 41 +   3914936 A----C----TA-CCCT---A--T----T-----C---T---T---CT---CTTTAGA-ACA-TGC------TGGA---------T--C-C--AT-------------T-A------C----------------
i Leptonychotes_weddellii.KB714746.1                     C 0 I 5
s Lepus_americanus.LepAme_scaffold_107385                     7304 14 -     14121 A----C----T-----A---G--CC---T-----A---T---T---CA---C----------------------------------------------------------------------------------
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 6
s Lipotes_vexillifer.KE559953.1                             268453 43 -    662738 A----ATAGCC-----T---A--T----T-----A---T---T---CT---CTCTAGT-ACA-TGC------TGTG---------T--T-C--AT-------------T-C------C-----------T-C--
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1438072 42 +   1826925 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            6665 37 +     11245 A----C----T-----A---G--CC---T-----A---T---T---CT---CTT---A-ACA-TTC------TGTG---------T--T-C--AT-------------C-A------C-----------C-C--
i Loris_lydekkerianus.k141_2539221                       I 9 C 0
s Loris_tardigradus.ctg83                                  1005486 37 +   6120653 A----C----T-----A---G--CC---T-----A---T---T---CT---CTT---A-ACA-TTC------TGTG---------T--T-C--AT-------------C-A------C-----------C-C--
i Loris_tardigradus.ctg83                                I 9 C 0
s Loxodonta_africana.GL010049.1                            4218188 40 -  43346337 A----C----T-----A---G--CC---A-----G---T---T---CC---TTCTAGA-ACA-CGC------TGTG---------T--T-A--AT-------------C-A------C-----------C-C--
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17956170 41 -  59628241 A----C----TA-CCCA---A--T----T-----C---T---T---CT---CTTTAGA-ACA-TGC------TATA---------T--C-C--AT-------------T-A------C----------------
i Lycaon_pictus.CM007581.1                               C 0 I 5
s Macaca_arctoides.k141_2326796                               7887 42 +     40492 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59677146 42 +  60120075 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13662 42 -     26193 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            81446 42 -    114318 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  7133 42 -     23192 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16606 42 -     29190 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACA-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  25171 42 +     37952 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186840260 42 + 187317192 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458823 42 -  25927173 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  81019 42 +     89720 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 8020 42 +     20474 A----C----T-----A---G--CT---T-----T---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   7820 42 -     14993 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  330686 42 -    668171 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 6133 42 -     24072 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26758 42 -     45290 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91459 43 +     94391 A----C----C-----A---GT-T----T-----A---TTCTT---CT---CTCTAGA-ACA-TGT------GGTG---------T--T-C--AT-------------T-A------C-----------C-C--
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23938349 42 -  24302211 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352471 42 +    752769 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              19077 43 +    737560 A----C----TA-CCCA---A--T----T-----C---T---T---CT---CTCTAGA-ACA-TGC------CGTG---------T--C-C--AT-------------T-A------T-----------C-C--
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              51063 43 -    317179 A----C----TA-CTCA---A--T----T-----C---T---T---CT---CTCTAGA-ACA-TGC------TGTG---------T--C-C--AT-------------T-A------T-----------C-C--
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33103917 41 -  40650429 A----C----T-----A---G--CT---T-----A---T---T---CT---CTTCAGA-ATA-TAA------TATG---------T--T-C--AT-------------TAT------T-----------T-C--
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        14182 37 -    207569 -----------------------C----T-----A---TTCTT---AT---CTCTAAA-ACA-TGC------TGTG---------T--C-C--AT-------------T-A------C-----------C-C--
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10894 32 +     13704 -----------------------T----T-----C---T---T---CT---CTTTAGC-ACA-TGC------TGTA---------T--C-C--AT-------------T-A------C----------------
i Mellivora_capensis.MelCap_flattened_line_69365         I 8 I 5
s Meriones_unguiculatus.MerUng_scaffold_7390                 33568 43 +    140813 A----T----T-----AGCTG--AT---T-----C---T---T---TT---CATAAAA-ATA-TAG------TGTG---------T--T-C--AT-------------T-A------T-----------T-C--
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12183032 43 -  29670104 A----C----T-----AGCTA--AT---T-----C---T---T---TT---CTTGAGA-ATA-TAG------TGTG---------C--T-C--AT-------------T-A------T-----------T-T--
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    4070 43 +     10310 A----ATAGCC-----T---A--T----T-----A---T---T---CT---CTCTAGA-ACA-TGC------TGTG---------T--T-C--AT-------------T-C------C-----------T-C--
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Mico_argentatus.k141_1239457                                6999 42 -      7380 A----C----G-----T---C--AT---T-----A---T---T---CT---CTCAAGA-ATG-TGC--------TG---------TGTT-T--GT-------------T-A------C-----------C-TGA
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_schneideri.k141_1950671                                      6972 42 -      7356 A----C----G-----T---C--AT---T-----A---T---T---CT---CTCAAGA-ATG-TGC--------TG---------TGTT-T--GT-------------T-A------C-----------C-TGA
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18292332 52 -  93316391 A----C----T-----A---G--CC---T-----ATTCT---T---CT---CTCAAGA-ACA-TGC------TACATTCACTATAT--T-C--AT-------------C-A------C-----------C-C--
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    23498 41 -    145209 A----C----T-----A---G--CA---T-----A---T---C---CA---TTCTAAA-ACA-CAC------TGTG---------T--T-C--AT-------------T-A------C-----------TCC--
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                16481 40 -     19307 A----C----T-----A---G-CC----T-----A---T---T---CT---CTCTAGA-ATA-TGC------TGGG---------T--T-C--AT-------------T-G------C-----------T-C--
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11261320 49 -  27267610 A----C----T-----AGCTA--AT---T-----C---T---C---TT---CTTGATA-ATA-TAGTGCTAGTGCA---------T--T-C--AT-------------T-A------T-----------T-T--
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1851435 40 +   8254450 A----C----T-----A---G-CC----T-----C---T---T---CT---TTCTAGA-ATA-TGC------CCTG---------T--T-C--AT-------------G-A------C-----------T-C--
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             35115 40 +     64694 A----C----T-----A---G-CC----T-----C---T---T---CT---TTCTAGA-ATA-TGC------CCTG---------T--T-C--AT-------------G-A------C-----------T-C--
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                          10055 42 -     28506 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6758 41 -      8324 A----C----TA-CCCT---A--T----T-----C---T---T---CT---CTTTAGA-ACA-TGC------TGGA---------T--C-C--AT-------------T-A------C----------------
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 5
s Mirza_zaza.k141_952172                                      9876 52 -     37649 A----C----T-----A---G--CC---T-----ATTCT---T---CT---CTCAAGA-ACA-TGC------TATATTCACTATAT--T-C--AT-------------T-T------C-----------C-C--
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    27574 43 -    437263 A----AGAGCC-----T---A--T----T-----A---T---T---CT---CTCTAGT-ACA-TGC------TGTG---------T--T-C--AT-------------T-C------C-----------T-C--
i Monodon_monoceros.MonMon_M_scaffold_103                I 2 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142481 40 -    366855 A----C----T-----A---G-CC----T-----A---T---T---CT---CTCTAGA-ATA-TGC------TGTG---------T--T-C--AT-------------T-G------C-----------T-C--
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   1524 39 +     82753 G----C----C-----T---G--G----T-----A---T---T---TT---CTCTAGA-ACA-GGC------TGTG---------C--T-C--AT-------------T-T------C-----------T-C--
i Moschus_moschiferus.MosMos_scaffold_13123              I 5 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   36282 27 +     37127 ----------------------------------------------CT---CTTTAGA-ACA-TGC------TGTA---------T--T-A--TC-------------T-A------C----------------
i Mungos_mungo.MunMun_flattened_line_23663               I 11 I 5
s Murina_feae.MurFea_scaffold_85699                           7659 40 +     14753 A----G----C-----A---G-CC----T-----A---T---T---CT---CTCTAGT-ATA-TGC------TGAG---------T--T-C--AT-------------T-A------T-----------T-C--
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84362182 44 - 120012414 A----C----A-----AGCTA--AT---T-----C---A---T---TT---CTTAAGA-ATA-TAG------TGTG---------T--TTC--AT-------------T-A------T-----------T-T--
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87651175 44 - 129401213 A----C----A-----AGCTA--AT---T-----C---T---T---TT---CTTAAGA-ATA-TAG------TGTG---------T--TTC--AT-------------T-A------T-----------T-T--
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31355846 27 -  89631738 ---------------------------------------------------CTTAAGG-ATA-TAG------TGTG---------T--T-C--CT-------------T-A------T-----------T-T--
i Mus_pahari.LT608297.1                                  I 11 C 0
s Mus_spretus.CM004101.1                                  90753238 44 - 130317789 A----C----A-----AGCTA--AT---T-----C---T---T---TT---CTTAAGA-ATA-TAG------TGTG---------T--TTC--AT-------------T-A------T-----------T-T--
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               302306 32 -  14710649 -----------------------T----T-----C---T---T---CT---CTTTAGC-ACA-TGC------TGTA---------T--C-C--AA-------------T-A------C----------------
i Mustela_putorius.JH418006.1                            I 8 I 5
s Myocastor_coypus.MyoCoy_scaffold_10123                     72015 42 -     80779 G----C----T-----A---CTGCT---T-----C---T---T---CT---TTCCAAC-ACT-TTC------CATG---------C--T-C--AG-------------T-A------C-----------G-T--
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                281299 40 -  10118263 A----G----T-----A---G-CC----T-----A---T---T---CT---CTCTAGT-ATA-TGC------TGAG---------T--T-C--AT-------------T-A------C-----------T-C--
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1588555 40 -   6019432 A----G----T-----A---G-CC----T-----A---T---T---CT---CTCTAGT-ATA-TGC------TGAG---------T--T-C--CT-------------T-A------C-----------T-C--
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3904651 40 -   4330536 A----G----T-----A---G-CC----T-----A---T---T---CT---CTCTAGT-ATA-TGC------TGAG---------T--T-C--AT-------------T-A------C-----------C-C--
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_353577                         253 40 -      1254 A----G----T-----A---G-CC----T-----A---T---T---CT---CTCTAGT-ATA-TGC------TGAG---------T--T-C--CT-------------T-A------C-----------T-C--
i Myotis_myotis.MyoMyo_scaffold_353577                   n 117 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190078 41 +    196477 A----C----T-----A---A--CC---T-----A---T---T---CT---CTCCAGAAACA-TGC------TGCA---------A--T-C--AT-------------G-A------C-----------C-C--
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2034878 32 -   3037898 ----------------------------------T---T---T---CT---CTTGAGG-ATA-TAC------TGTG---------T--T-T--GT-------------G-A------T-----------C-C--
i Nannospalax_galili.KL204047.1                          I 2 C 0
s Nasalis_larvatus.k141_413338                               16057 42 +     21681 A----G----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308347 41 +  31847680 A----C----TA-CCCT---A--T----T-----C---T---T---CT---CTTTAGA-ACA-TGC------TGGA---------T--C-C--AT-------------T-A------C----------------
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 5
s Neophocaena_asiaeorientalis.KZ687982.1                   5866531 43 +   7148211 A----AGAGCC-----T---A--T----T-----A---T---T---CT---CTCTAGT-ACA-TGC------TGTG---------T--T-C--AT-------------T-C------C-----------T-C--
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    758721 17 +    783361 ---------------------------------------------------------------TGC------TGTG---------T--T-C--AT-------------T-G------C-----------T-C--
i Noctilio_leporinus.NocLep_scaffold_251                 I 9 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150232 41 -   9404916 A----C----TA-CCCA---A--T----T-----C---T---T---CT---CTTTAGA-ACA-TGC------TATA---------T--C-C--AT-------------T-A------C----------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 5
s Nycticebus_bengalensis.LG01                            102587031 37 - 196305487 A----C----T-----A---G--CC---T-----A---T---T---CT---CTT---A-ACA-TTC------TGTG---------T--T-C--AT-------------C-A------C-----------C-C--
i Nycticebus_bengalensis.LG01                            I 9 C 0
s Nycticebus_coucang.k141_1127096                              955 37 +      2075 A----C----T-----A---G--CC---T-----A---T---T---CT---CTT---A-ACA-TTC------TGTG---------T--T-C--AT-------------C-A------C-----------C-C--
i Nycticebus_coucang.k141_1127096                        I 9 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105762386 37 + 199412804 A----C----T-----A---G--CC---T-----A---T---T---CT---CTT---A-ACA-TTC------TGTG---------T--T-C--AT-------------C-A------C-----------C-C--
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 9 C 0
s Ochotona_princeps.JH802162.1                             1364685  6 +   3988456 ----------------------------------G---C---T---CA---C----------------------------------------------------------------------------------
i Ochotona_princeps.JH802162.1                           I 3 I 20
s Odobenus_rosmarus.KB229312.1                              507489 41 -   2017862 A----C----TA-CCCT---A--T----T-----C---T---T---CT---GTTTAGA-ACA-TGC------TGGA---------T--C-C--AT-------------T-A------C----------------
i Odobenus_rosmarus.KB229312.1                           C 0 I 5
s Okapia_johnstoni.LVCL01S0005463.1                          77361 39 -    150152 g----c----c-----t---g--c----t-----a---t---t---tt---ctctaga-aca-tgc------tgtg---------c--t-c--tt-------------t-c------c-----------t-c--
i Okapia_johnstoni.LVCL01S0005463.1                      I 5 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   25974 43 +     28053 A----C----C-----AGATA--AT---T-----C---T---T---TT---CTTGAGA-ATA-TAG------TGTG---------T--T-T--GT-------------T-A------T-----------T-T--
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    81010 43 +    102263 A----G----T-----AGCTA--AT---T-----C---T---T---TT---CTTGAGA-ATA-TAG------TGTG---------T--T-C--AT-------------T-A------T-----------T-T--
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2782454 43 -  10937097 A----ATAGCC-----T---A--T----T-----A---T---T---CT---CTCTAGT-ACA-TGC------TGTG---------T--T-C--AT-------------T-C------C-----------T-C--
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387              10948 40 -     18566 A----C----T-----A---G--CC---T-----A---T---T---CT---TTCTAAA-ACA-TGC------TGTG---------T--T-C--AC-------------T-A------C-----------C-T--
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67148163 14 + 174332312 A----C----T-----A---G--CC---T-----A---T---T---CA---C----------------------------------------------------------------------------------
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 6
s Otocyon_megalotis.JAEUCK010005147.1                       463182 41 -    559221 A----C----TA-CACA---A--T----T-----C---T---T---CT---CTTTAGA-ACA-TGC------TATA---------T--C-C--AT-------------T-A------C----------------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 5
s Otolemur_crassicaudatus.k141_222918                         4940 37 +      8798 A----C----T-----A---G--CC---T-----G---T---T---CT---CTT---A-ACA-GTC------TGTG---------T--T-C--AT-------------C-A------C-----------C-C--
i Otolemur_crassicaudatus.k141_222918                    I 9 C 0
s Otolemur_garnettii.GL873799.1                             697102 37 -   1103335 A----C----T-----A---G--CC---T-----G---C---T---CT---CTT---A-ACA-TTC------TGTG---------T--T-C--AT-------------C-A------C-----------C-C--
i Otolemur_garnettii.GL873799.1                          I 9 C 0
s Ovis_aries.CM001607.2                                   17586623 39 +  44047080 G----C----C-----T---G--G----T-----A---T---T---TT---TTCTAGA-ACG-TAC------TGTG---------C--T-C--AT-------------T-C------C-----------T-C--
i Ovis_aries.CM001607.2                                  I 5 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      174600 39 -    191736 g----c----c-----t---g--g----t-----a---t---t---tt---ttctaga-acg-tac------tgtg---------c--t-c--at-------------t-c------c-----------t-c--
i Ovis_canadensis.OviCan_scaffold_2572                   I 5 C 0
s Pan_paniscus.KQ411613.1                                    45008 42 +     80009 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCGAGA-ACG-TGC------TGTG---------T--T-C--GT-------------T-A------C-----------C-TGA
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03001836.1                             30930 42 +     51860 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCGAGA-ACG-TGC------TGTG---------T--T-C--GT-------------T-A------C-----------C-TGA
i Pan_troglodytes.NBAG03001836.1                         I 736 I 159
s Panthera_onca.PanOnc_flattened_line_3271                  151991 41 +    230217 A----C----TA-CCCT---G--C----T-----C---T---T---CT---CTTTATA-ACA-TGC------TCTA---------T--T-C--AT-------------T-A------C----------------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 5
s Panthera_pardus.KV860321.1                                265200 41 +  18783137 A----C----TA-CCCT---G--C----T-----C---T---T---CT---CTTTATA-ACA-TGC------TCTA---------T--T-C--AT-------------T-A------C----------------
i Panthera_pardus.KV860321.1                             C 0 I 5
s Panthera_tigris.KE722367.1                               4722080 41 -   8748460 A----C----TA-CCCT---G--C----T-----C---T---T---CT---CTTTATA-ACA-TGC------TCTA---------T--T-C--AT-------------T-A------C----------------
i Panthera_tigris.KE722367.1                             C 0 I 5
s Pantholops_hodgsonii.KE114653.1                          1265517 39 -   2937107 G----C----C-----T---G--G----T-----A---T---T---TT---TTCTAGA-ACG-TAC------TGTG---------C--T-C--AT-------------T-C------C-----------T-C--
i Pantholops_hodgsonii.KE114653.1                        I 5 C 0
s Papio_anubis.CM001495.2                                183444149 42 + 183742232 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7795 42 +     20448 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20564607 42 +  20919399 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6539 42 +     41871 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     9832 42 +     27711 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                   829 42 -     11374 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13492 34 -     78924 A----C----TA-CTCA---G--T----T-----C---T---T---CT---CTTAAGG-ACA-TGC------TGTA---------T------------------------------------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 8
s Perodicticus_ibeanus.k141_855320                           10931 37 +     13100 A----C----T-----A---G--CC---T-----A---T---T---CT---CTT---A-ACA-TTC------TGTG---------T--T-C--AT-------------C-A------T-----------C-C--
i Perodicticus_ibeanus.k141_855320                       I 9 C 0
s Perodicticus_potto.k141_1092580                             9325 37 +     25941 A----C----T-----A---G--CC---T-----A---T---T---CC---CTT---A-ACA-TTC------TGTG---------T--T-C--AT-------------C-A------T-----------C-C--
i Perodicticus_potto.k141_1092580                        I 9 C 0
s Peromyscus_maniculatus.KI615324.1                       18195590 43 -  18517816 A----G----T-----AGCTA--AT---T-----C---T---T---TT---CTTGAGA-ATA-TAG------TGTG---------T--T-C--AT-------------T-A------T-----------T-T--
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28902 24 -     29689 A----T----T-----A---CTGCT---T-----C---T---T---CT---CTCCAGA-AC-------------------------------------------------------------------------
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 I 11
s Phocoena_phocoena.PhoPho_flattened_line_24159               9493 43 +     63832 A----AGAGCC-----T---A--T----T-----A---T---T---CT---CTCTAGT-ACA-TGC------TGTG---------T--T-C--AT-------------T-C------C-----------T-C--
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           44548 42 +     62158 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACA-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        39295 42 +     89929 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACA-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40711 42 +     51399 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACA-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296950 42 -  14605196 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACA-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2591 40 +     22620 A----G----T-----A---G-CC----T-----A---T---T---CT---CTGTAGT-ACG-TGC------TGAG---------T--T-C--AT-------------T-A------C-----------T-C--
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           35199 43 +     35617 A----ATAGCC-----T---A--T----T-----A---T---T---TT---CTCTAGA-ACA-TGC------TGTG---------T--T-C--AT-------------T-C------C-----------T-C--
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.NDHI03003595.1                                 2875 42 -     34550 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCGAGA-ACG-TGC------TGTG---------T--T-A--GT-------------T-A------C-----------C-TGA
i Pongo_abelii.NDHI03003595.1                            n 24570 I 352
s Pongo_pygmaeus.ctg66                                     9571660 40 +   9816681 ----------T-----A---G--CT---T-----A---T---T---CT---CTCGAGA-ACG-TGC------TGTG---------T--T-A--GT-------------T-A------C-----------C-TGA
i Pongo_pygmaeus.ctg66                                   I 1 C 0
s Presbytis_comata.k141_677006                               74232 42 -     81375 A----G----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              6053 42 +     19060 A----G----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 14185 39 -     22811 A----C----T-----A---A--A----T-----G---C---T---CC---TTCTAGA-ACA-TGC------TGTG---------C--T-A--AT-------------C-A------C-----------C-C--
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2597585 43 -   4620579 A----C----T-----A---G--CC---T-----ATTCT---T---CA---CTCAAGA-GCA-TGC------TATA---------T--T-C--GT-------------T-A------C-----------C-C--
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     991568 43 +   2598838 A----C----T-----A---G--CC---T-----ATTCT---T---CT---CTCAAGA-ACA-TGC------TATA---------T--T-C--AT-------------T-A------C-----------C-C--
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29880 43 +     38485 A----C----T-----A---G--CC---T-----ATTCT---T---CT---CTCAAGA-ACA-TGC------TATA---------T--T-C--AT-------------T-A------C-----------C-C--
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              1922 43 -     13098 A----C----T-----A---G--CC---T-----ATTCT---T---CT---CTCAAGA-ACA-TGC------TATA---------T--T-C--AT-------------T-A------C-----------C-C--
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          27401 43 +     35766 A----C----T-----A---G--CC---T-----ATTCT---T---CT---TTCAAGA-ACA-TGC------TATA---------T--T-C--AT-------------T-A------C-----------C-C--
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           5588 43 -     24134 A----C----T-----A---G--CC---T-----ATTCT---T---CT---TTCAAGA-ACA-TGC------TATA---------T--T-C--AT-------------T-A------C-----------C-C--
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        29413 43 -     67325 A----C----T-----A---G--CC---T-----ATTCT---T---CT---CTCAAGA-ACA-TGC------TATA---------T--T-C--AT-------------T-A------C-----------C-C--
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           5636 43 -      6182 A----C----T-----A---G--CC---T-----ATTCT---T---CT---CTCAAGA-ACA-TGC------TATA---------T--T-C--AT-------------T-A------C-----------C-C--
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            11214 43 -     21651 A----T----T-----AGCTA--At---c-----c---t---t---tt---cataaaa-ata-tag------tGTG---------T--T-C--AT-------------T-A------T-----------T-C--
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            15990 39 -     21811 A----C----T-----A---G-CC----T-----A---C---T---GT---CTCTAG--ATA-CGC------TGTG---------T--T-C--AT-------------T-G------C-----------T-C--
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41089 32 +     42204 -----------------------T----T-----C---T---T---CT---CTTTAGC-ACA-TGC------TGTA---------T--C-C--AT-------------T-A------C----------------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 8 I 5
s Pteropus_alecto.KB030862.1                              22977605 43 +  28871421 a----c----t-----a---g-tc----t-----a---ttctt---ct---ctctaga-aca-tgc------ggtg---------t--t-c--at-------------t-a------c-----------c-C--
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                7658 43 -      8028 A----C----T-----A---GT-C----T-----A---TTCTT---CT---CTCTAGA-ACA-TGC------GGTG---------T--T-C--AT-------------T-A------C-----------C-C--
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20275152 41 -  38429054 A----C----TA-CTCT---G--C----T-----C---T---T---CT---CTTTATA-ACA-TGC------TGTA---------T--T-C--AT-------------T-A------C----------------
i Puma_concolor.QAVW01001104.1                           C 0 I 5
s Pygathrix_cinerea.k141_1153803                             16039 42 -     91421 A----G----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7610159 42 +   7812017 A----G----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             16038 42 -     72585 A----G----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6100 39 +     55207 g----c----c-----t---g--g----t-----a---t---t---tt---ctccaga-aca-cgc------tgtg---------c--t-c--at-------------t-c------c-----------t-c--
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 5 C 0
s Rattus_norvegicus.chr16                                 53571430 43 +  90668790 A----C----T-----AACTA--AT---T-----C---T---C---TT---CTTAAGA-ATA-TAG------TGTG---------T--T-C--CT-------------T-A------T-----------T-T--
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        367814 43 -   3329780 A----T----T-----A---A-CC----T-----C---TTCTT---CT---CTTTAGA-ATA-TGC------TATA---------T--T-C--AT-------------T-A------C-----------C-C--
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             7749 42 -     11128 A----G----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91237098 42 - 195417433 A----G----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672754 42 +   7961872 A----G----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88642 43 -     96226 a----c----t-----a---g-tc----t-----a---ttctt---ct---ccctaga-aca-tgc------agtg---------t--t-c--at-------------t-a------c-----------c-c--
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_8081                                  2158 40 +     42994 A----C----C-----A---C--TT---C-----A---T---T---CT---CTCAAGA-ACG-TGC--------TG---------T--T-T--GT-------------T-A------C-----------C-TGA
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                              851 42 +      2253 A----C----C-----A---C--TT---C-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-T--GT-------------T-A------C-----------C-TGA
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               1280 42 -      8737 A----C----C-----A---C--TT---C-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-T--GT-------------T-A------C-----------C-TGA
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                               933 42 +      2343 A----C----C-----A---C--TT---C-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-T--GT-------------T-A------C-----------C-TGA
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209475812 40 + 209938924 A----C----C-----A---C--TT---C-----A---T---T---CT---CTCAAGA-ACG-TGC--------TG---------T--T-T--GT-------------T-A------C-----------C-TGA
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                 256 42 -      7576 A----C----C-----A---C--TT---C-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-T--GT-------------T-A------C-----------C-TGA
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951879 42 - 121099817 A----C----C-----A---C--AT---T-----A---T---T---CT---CTCAAGG-ATG-TGC------TATG---------T--T-T--GT-------------T-A------C-----------C-TGA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24221 42 +     46362 A----C----C-----A---C--AT---T-----A---T---T---CT---CTCAAGG-ATG-TGC------TGTG---------T--T-T--GT-------------T-A------C-----------C-TGA
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               24316 42 +     45824 A----C----C-----A---C--AT---T-----A---T---T---CT---CTCAAGG-ATG-TGC------TGTG---------T--T-T--GT-------------T-A------C-----------C-TGA
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             40995 42 -     64574 A----C----C-----A---C--AT---T-----A---T---T---CT---CTGAAGG-ATG-TGC------TGTG---------T--T-T--GT-------------T-A------C-----------C-TGA
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4068 42 -     23631 A----C----C-----A---C--AT---T-----A---T---T---CT---CTGAAGG-ATG-TGC------TGTG---------T--T-T--GT-------------T-A------C-----------C-TGA
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 24212 42 -     61129 A----C----C-----A---C--AT---T-----A---T---T---CT---CTCAAGG-ATG-TGC------TGTG---------T--T-T--GT-------------T-A------C-----------C-TGA
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5421562 42 -   5703754 A----C----C-----A---C--GT---T-----A---T---T---CT---CTCAAGG-ATA-TGC------TGCG---------T--T-T--GT-------------T-A------C-----------C-TGA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          56803 42 -     80660 A----C----C-----A---C--GT---T-----A---T---T---CT---CTCAAGG-ATA-TGC------TGCG---------T--T-T--GT-------------T-A------C-----------C-TGA
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154021 53 -    313613 A----C----T-----C---A--C----T-----AGTTT---T---CT---CTCGAGA-ACA-CAC------TGTG---------T--T-C--AT-------------T-A-----ACACCCCC-ACCCC-C--
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 12 C 0
s Semnopithecus_entellus.k141_1672505                          930 42 -     12572 A----G----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27780 42 +     39453 A----G----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            8298 42 +     27826 A----G----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             7820 42 -     19483 A----G----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      1121 42 -     12762 A----G----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                            982 42 +     13763 A----G----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     1123 43 -     30804 A----G----T-----AGCTA--AT---T-----C---T---T---TA---CTTGAGA-ATA-TAG------TGTG---------T--T-C--AT-------------T-A------T-----------T-T--
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               4586 40 +   1910179 A----T----T-----A---G--C----T-----A---T---T---CT---CTTTAGA-ACA-TGC------TGTG---------T--T-C--AT-------------T-A-----CT-----------C-C--
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13651830 41 -  18376816 A----C----T-----A---G--T-CATT-----A---T---T---CT---TTCTAAA-ACA-TGA------TGTG---------T--T-C--AT-------------T-A-----CC----------------
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1954775 41 -   3870691 A----C----T-----A---G--CT---T-----A---T---T---CT---CTTCAGA-ATA-TAA------TATG---------T--T-C--AT-------------TAT------T-----------T-C--
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             31571 41 +     97271 A----C----TA-CCCT---A--T----T-----C---T---T---CT---CTTTAGA-GCA-TGC------TGTA---------T--C-C--AT-------------T-A------C----------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 5
s Suricata_suricatta.SurSur_flattened_line_6629              19184 27 -    196729 ----------------------------------------------CT---CTTTAGA-ACA-TAT------TGTA---------T--T-A--TT-------------T-A------C----------------
i Suricata_suricatta.SurSur_flattened_line_6629          I 11 I 5
s Sus_scrofa.JH118708.1                                      37223 43 -     47482 a----c----ta-gatg---a--t----t-----a---t---t---ct---ctctaga-aca-ggc------tgtg---------t--t-c--at-------------t-c------c-----------c-C--
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                11642 42 +     41958 A----C----T-----G---G-CC----T-----G---T---TCTTCT---CTCCAG--ACA-TGC------TGTG---------T--T-C--AA-------------G-G------C-----------T-G--
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73438 41 +    116680 A----C----T-----A---A--CC---T-----A---T---T---CT---CTCCAGAAACA-TGC------TGCA---------A--T-C--GT-------------G-A------C-----------C-C--
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      119601 43 -    156842 G----C----TA-GCCT---C--T----T-----C---T---T---CT---CTCTATA-ACA-TGC------TGTG---------T--T-C--AT-------------T-A------C-----------C-C--
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    388074 43 +    539355 G----C----TA-GCCT---C--T----T-----C---T---T---CT---CTCTATA-ACG-TGC------TGTG---------T--T-C--AT-------------T-A------C-----------C-C--
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Theropithecus_gelada.CM009954.1                        186429467 42 + 186847797 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106199 42 +    114563 A----C----T-----A---CTGCT---T-----C---T---T---TT---CTCCCAA-ATG-TCC------CACA---------T--T-C--AT-------------T-G------A-----------C-T--
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   7209 39 +      8208 A----C----T-----A---G--CC---T-----G---C---T---CT---CTCCAGA-AGA-TGC------TGT----------T--T-C--AT-------------C-A------C-----------C-C--
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     82037 40 +    610378 A----T----T-----A---G-CC----T-----A---T---T---CT---CTCTAGA-ATA-TGC------TGTG---------T--T-C--AT-------------T-G------C-----------T-C--
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         11871 42 -     20410 A----G----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                       985 42 -     12674 A----G----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACA-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       11972 42 +     19930 A----G----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       8383 42 -     19997 A----G----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48522 42 -     60166 A----G----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        15994 42 -     27529 A----G----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     15938 42 -     18194 A----G----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9650 42 -     21137 A----G----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    8353 42 -     10723 A----G----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7525 42 +      9834 A----G----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TAC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        25838 42 +     32220 A----G----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5939940 42 +   6242583 A----G----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        9191 42 +     20839 A----G----T-----A---G--CT---T-----A---T---T---CT---CTCAAGA-ACG-TGC------TGTG---------T--T-G--GT-------------T-A------C-----------C-TGA
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                     452 39 +     27266 G----C----C-----T---G--T----T-----T---T---T---TT---CTCTAGA-ACA-TAC------TATG---------G--T-C--AT-------------T-C------T-----------T-C--
i Tragulus_javanicus.TraJav_scaffold_40725               I 233 C 0
s Trichechus_manatus.JH594705.1                            4294092 40 +  10818551 A----C----G-----A---G--CC---T-----G---T---T---CT---TTCTAGA-ACA-TGA------AGTG---------T--T-A--AC-------------T-A------C-----------C-C--
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2156619 40 +   4065304 A----C----T-----A---G--CC---T-----A---T---T---CT---CTCGAAA-ATA-TTC------TGTA---------T--T-C--AT-------------T-A------C-----------T-C--
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                    10062 40 -     10553 A----C----T-----A---G--CC---T-----A---T---T---CT---CTCAAAA-ATA-TTC------TGTA---------T--T-C--AT-------------T-A------C-----------C-C--
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15738693 43 +  33153633 a----atagcc-----t---a--t----t-----a---t---t---ct---ctctagt-aca-tgc------tgtg---------t--t-c--at-------------t-c------c-----------t-c--
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54101 66 -     77625 G----C----T-----C---A--T----T-----AGTTT---T---CT---CTGTAAA-ACA-CAT------TCTG---------C--T-A--ATAATCCACCCCCTTT-T-----TCACCCCC-ACCAC-C--
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4851281 27 -   5085361 --------------------------------------T---T---CT---CTTT--A-ACA-TGC------TGTA---------T--C-C--AT-------------T-A------C----------------
i Ursus_maritimus.KK499267.1                             C 0 I 5
s Varecia_rubra.k141_590885                                  12250 35 +     50397 A----C----G-----A---G--CC---T-----ATTCT---T---CA---CTCAAGA-GCA-TGC------TATA---------T--T---------------------------------------------
i Varecia_rubra.k141_590885                              C 0 I 3
s Varecia_variegata.k141_1128296                             12309 35 +     24756 A----C----T-----A---G--CC---T-----ATTCT---T---CA---CTCAAGA-GCA-TGC------TATA---------T--T---------------------------------------------
i Varecia_variegata.k141_1128296                         C 0 I 3
s Vicugna_pacos.KN270157.1                                 5372601 43 -   5488506 AGTAGC----C-----T---A--T----T-----A---T---T---CT---CTCTAGA-GCA-TGC------TGTG---------T--T-C--CT-------------C-C------C-----------C-T--
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 11646 25 -     43706 ---------------------------------------------------CTTTAGA-ACA-TGC------TATA---------T--C-C--AT-------------T-A------C----------------
i Vulpes_lagopus.VulLag_flattened_line_30954             I 13 I 5
s Xerus_inauris.XerIna_scaffold_2302                          1908 41 +    224448 A----C----T-----A---G--CT---T-----A---T---T---CT---CTCCAGA-ATG-TAC------TGTG---------T--T-C--AT-------------TAC------C-----------C-T--
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      15712 40 +     63895 A----C----T-----A---G--CTCTCT-----C---A---T---AT---CTCCAGG-ATA-TAC------AGTG---------T--G-C--AT-------------T-A-----------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_3601914             48 43 +       295 A----ATAGCC-----T---A--T----T-----A---T---T---CT---CTCTAGA-ACA-TGC------TGTG---------T--T-C--AT-------------T-C------C-----------T-C--
i Ziphius_cavirostris.ZipCav_flattened_line_3601914      C 0 C 0
e Chiropotes_albinasus.k141_2206961                           1651 303 -     15524 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Tarsius_wallacei.k141_254427                                1877  3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080  3 +     70052 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Glis_glis.GliGli_scaffold_19807                            32063  0 +     49224 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cephalopachus_bancanus.k141_1423433                         6085  3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Carlito_syrichta.NW_007259797.1                           156587  3 -    496798 I
e Arctocebus_calabarensis.k141_2318572                       12167  0 +     14667 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       7707 29 +     62944 C-ACG--A--AC------CTTTGG-AAAG----T-GA-TTT-T---T-G-----G-----------T------G
s Acinonyx_jubatus.LLWD01001279.1                           828191 18 -   1699592 ----------------------------C----A-GA-T---TTt-t-g--ct-g-----------a---gaga
i Acinonyx_jubatus.LLWD01001279.1                        I 5 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     71662 25 +     87051 C-ACTCGC--TG------TTCTGG-ATTG----G-GG-AAC---------------------------------
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 1
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511466 18 -  29979442 ----------------------------C----A-GA-T---T-TTT-G--ct-g-----------a---gaaa
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 5 C 0
s Ailurus_fulgens.LNAC01001112.1                             80202 20 -    347723 ----------------------------c----a-ga-t---ttt-t-g--ct-a-----------a-gaaaaa
i Ailurus_fulgens.LNAC01001112.1                         I 5 I 3
s Allactaga_bullata.AllBul_scaffold_9566                     75372 16 -     89534 ------------------TTTTGG-AAAT----G-GA-ATC---------------------------------
i Allactaga_bullata.AllBul_scaffold_9566                 I 2 I 1
s Allenopithecus_nigroviridis.k141_3361533                   15636 29 -     52922 C-TTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15556 29 -     28001 C-TTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          6054 29 -     18505 C-TTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           6906 29 -     12518 C-TTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              8479 29 +     51355 C-ATG--A--AC------CTTTGG-AAGC----A-GA-TTT-T---T-G-----G-----------T------G
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                1588 29 -     36483 C-ATG--A--AC------CTTTGG-AAGC----A-GA-TTT-T---T-G-----G-----------T------G
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              12040 29 +     28687 C-ATG--A--AC------CTTTGG-AAGC----A-GA-TTT-T---T-G-----G-----------T------G
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                  553 29 +     27940 C-ATG--A--AC------CTTTGG-AAGC----A-GA-TTT-T---T-G-----G-----------T------G
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            1597 29 -      9457 C-ATG--A--AC------CTTTGG-AAGC----A-GA-TTT-T---T-G-----G-----------T------G
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                              553 29 +     30492 C-ATG--A--AC------CTTTGG-AAGC----A-GA-TTT-T---T-G-----G-----------T------G
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              4548 29 +     47717 C-ATG--A--AC------CTTTGG-AAGC----A-GA-TTT-T---T-G-----G-----------T------G
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              1280 29 +      5663 C-ATG--A--AC------CTTTGG-AAGC----A-GA-TTT-T---T-G-----G-----------T------G
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             15732 29 +     50774 C-ATG--A--AC------CTTTGG-AAGC----A-GA-TTT-T---T-G-----G-----------T------G
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          676363 27 -   2318259 C-ACATGC--CC------CTTCGG-CAGG----A-GA-T---T-TTt---------------------------
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 8
s Anoura_caudifer.AnoCau_scaffold_1412                      186233 38 +    412891 C-ATATGA--CA------CTTGAG-GAAG----A-GA-C---T-TAT-GC-T--G-----------AGAAAA-A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 3
s Antilocapra_americana.AntAmePen_scaffold_12469             98843 36 -    100397 C-ATGTGC--CC------CTTCAG-GAGG----A-GA-T---T-TTT-GCATA-G----------GA------A
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aotus_azarae.k141_3104676                                  16721 29 -     33861 C-ACG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            16718 29 -     34016 C-ACG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299145 29 -   5030052 C-ACG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             16754 29 -     34685 C-ACG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               29879 29 -     47192 C-ACG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13484 33 +     20879 C-ATGTGA--CC------CTTTGA-AAAG----A-GA-TTT-T---T-GC-T--G-----------G------G
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 4
s Arctocebus_calabarensis.k141_2318572                       12167 26 +     14667 -----------A------GTTTAG-AAAG----A-GA-TTT-T---T-GC-TA-G-----------G------A
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5617 39 +     43469 C-ACATGA--CC------CTTGAG-GAAA----A-GA-C---T-TTT-GC-T--G-----------AGAAAAAA
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 3
s Avahi_laniger.k141_765380                                  54568 34 -     92717 C-ATA--GGACC------CTTTGG-AAAG----A-GA-TTT-T---T-GC-TA-A-----------G------G
i Avahi_laniger.k141_765380                              C 0 I 3
s Avahi_peyrierasi.k141_1424874                              55199 34 +     85213 C-ATA--TGACC------CTTTGG-AAAG----A-GA-TTT-T---T-GC-TA-A-----------G------G
i Avahi_peyrierasi.k141_1424874                          C 0 I 3
s Balaenoptera_acutorostrata.KI537508.1                   15192592 35 +  23207421 C-ATATGA--CG------CTTTGG-GAGG----A-GA-T---T--Tttgcata-g-----------a------a
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         3057 35 -     18090 C-ATATGA--CG------CTTTGG-GAGG----A-GA-T---T--Tttgcata-g-----------a------a
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    27285 35 +     34529 C-ACATGC--CC------CTTCAG-CAGG----A-GA-T---T-TTT-GCACA-G-----------A------A
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    200343 35 -    288883 c-acatgc--cc------ctttgG-GAGG----A-GA-T---TTt-t-gcaca-g-----------a------a
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003028.1                                  18363247 35 - 116941312 C-ACATGC--CC------CTTCGG-GAGG----A-GA-T---T-TTt-gcata-g-----------a------a
i Bos_indicus.CM003028.1                                 I 44 C 0
s Bos_mutus.JH880303.1                                     1126103 35 -   1948126 c-acatgc--cc------ctttgG-GAGG----A-GA-T---TTt-t-gcaca-g-----------a------a
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000184.6                                   18200221 35 - 114055384 C-ACATGC--CC------CTTCGG-GAGG----A-GA-T---T-TTt-gcata-g-----------a------a
i Bos_taurus.CM000184.6                                  I 44 C 0
s Bubalus_bubalis.KI419123.1                               2819853 35 +   4408762 c-acatgc--cc------cttcgG-GAGG----A-GA-T---T-TTt-gcata-g-----------a------a
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Callibella_humilis.k141_1278103                             6605 29 -     10423 C-ATG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callithrix_geoffroyi.k119_69176                              444 29 +      5377 T-ATG--A--AC------CTTTGG-AAAG----A-GA-TTG-T---T-G-----G-----------T------G
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592305 29 - 189096842 T-ATG--A--AC------CTTTGG-AAAG----A-GA-TTG-T---T-G-----G-----------T------G
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1119 29 -     12329 T-ATG--A--AC------CTTTGG-AAAG----A-GA-TTG-T---T-G-----G-----------T------G
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10003117 40 -  17673402 a-acatga--CC------CTTTGG-GAGG----A-AACA---tt--t-g--ct-gag-agaaa---a------a
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2335593 40 -   7040546 a-acatga--CC------CTTTGG-GAGG----A-AACA---tt--t-g--ct-gag-agaaa---a------a
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  403892 40 -   1652518 a-acatga--CC------CTTTGG-GAGG----A-AACA---tt--t-g--ct-gag-agaaa---a------a
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17800057 14 -  60362399 ----------------------------T----A-GA-T---T-TTT-GC-T--G-----------A-------
i CanFam4.chr16                                          I 5 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_27089                      805 14 -     43241 ----------------------------T----A-GA-T---T-TTT-GC-T--G-----------A-------
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 5 I 1
s Canis_lupus_dingo.QKWQ01000480.1                         9035500 14 -   9314153 ----------------------------T----A-GA-T---T-TTT-GC-T--G-----------A-------
i Canis_lupus_dingo.QKWQ01000480.1                       I 5 I 1
s Canis_lupus_familiaris.chr16                            17959976 14 -  59632846 ----------------------------T----A-GA-T---T-TTT-GC-T--G-----------A-------
i Canis_lupus_familiaris.chr16                           I 5 I 1
s Canis_lupus_orion.HG994398.1                            18501273 14 +  63665305 ----------------------------T----A-GA-T---T-TTT-GC-T--G-----------A-------
i Canis_lupus_orion.HG994398.1                           I 5 I 1
s Capra_aegagrus.CM003241.1                               18830481 27 +  46296322 C-ACATGC--CC------CTTCGG-CAGG----A-GA-T---T-TTt---------------------------
i Capra_aegagrus.CM003241.1                              C 0 I 8
s Capra_hircus.CM004588.1                                 18061201 27 -  44709034 C-ACATGC--CC------CTTCGG-CAGG----A-GA-T---T-TTt---------------------------
i Capra_hircus.CM004588.1                                C 0 I 8
s Capromys_pilorides.CapPil_scaffold_65020                    1869 34 -     12242 C-ACATGA--TC------CTTTGC-AAAG----A-GA-CTT-T---T-GC-T--G-----------GG-----G
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 4
s Carollia_perspicillata.CarPer_scaffold_92756                5984 38 -     11696 C-ACATGA--CC------CTTGAG-GAAG----A-GA-C---T-TTT-GC-T--G-----------AGAAAA-A
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 3
s Castor_canadensis.CasCan_scaffold_2074                    138164 33 +    179628 c-CCACAT--GC------CCTTTA-AAAG----G-GA-TAT-T---T-GC-T--G-----------G------G
i Castor_canadensis.CasCan_scaffold_2074                 I 188 I 5
s Catagonus_wagneri.CatWag_scaffold_2839                     94408 43 +    217609 C-ACAGGA--CC------CTTTGG-CAGG----A-GA-T--AT--CT-AC-T--G-GGGAAAAAGGC------A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                         11045 29 -     11392 C-ATG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               7229 29 -      7577 C-ATG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25653650 29 +  26074798 C-ACG--A--AC------CTTTGC-AAAG----A-GA-TTT-T---T-G-----T-----------T------G
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                1588 29 +     28840 C-ACG--A--AC------CTTTGC-AAAG----A-GA-TTT-T---T-G-----T-----------T------G
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 1317 29 +     14051 C-ACG--A--AC------CTTTGC-AAAG----A-GA-TTT-T---T-G-----T-----------T------G
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Ceratotherium_simum.JH767749.1                          12232335 36 +  27778364 c-acatga--cc------cttTGG-GAAG----A-ga-t---tt-ct-g--ct-g-----------a---ggaa
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3362 36 -     25243 C-ACATGA--CC------CTTTGG-GAAG----A-GA-T---T-TCT-GC-T--G-----------AGGA---A
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4476571 29 +   4669795 C-GTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        1073 29 +     17872 C-GTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           1730 29 -     14043 C-GTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9763 29 +     27781 C-GTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         9931 29 -     20310 C-ATG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          12911 29 +     29689 C-ATG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7657 29 -     20078 C-ATG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          15579 29 -     27936 C-ATG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            4445 29 -     17152 C-ATG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38817990 29 +  39242232 C-ATG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223679 29 -  21565898 C-ATG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40798 29 -     53127 C-ATG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        1049 29 +     13442 C-ATG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15598 29 -     27947 C-ATG--A--AC------CTTTGG-GAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         15574 29 +     17596 C-ATG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          1617 29 +     14005 C-ATG--A--AC------CTCTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1359 34 -      8501 A-ACATGA--CA------CTTTGT-GAAG----A-GA-TTA-T--TA-TC-T--G-----------G------G
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 I 5
s Cheirogaleus_major.k141_333249                             21948 34 -     52598 C-ATA--GGACC------CTTTGG-AAAG----A-GA-TTT-T---T-GC-TA-A-----------G------G
i Cheirogaleus_major.k141_333249                         C 0 I 2
s Cheirogaleus_medius.k141_1055463                           17319 34 +     57038 C-ATA--GGACC------CTTTGG-AAAG----A-GA-TTT-T---T-GC-TA-A-----------G------G
i Cheirogaleus_medius.k141_1055463                       C 0 I 2
s Chinchilla_lanigera.JH722012.1                           1253744 34 +   2543920 C-ACATGG--TC------CTTTGC-AAAG----A-GA-CTT-T---T-CC-T--G-----------GG-----G
i Chinchilla_lanigera.JH722012.1                         C 0 I 4
s Chiropotes_albinasus.k141_2206961                           1954  8 -     15524 ---------------------------------------TT-T---T-G-----A-----------T------G
i Chiropotes_albinasus.k141_2206961                      I 303 C 0
s Chlorocebus_aethiops.ctg25                              18429558 29 -  18827391 T-TTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       15994 29 -     50209 C-TTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135422995 29 + 135778131 T-TTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 19178 34 +     19366 g-atgtga--ca------ctttgt-gaaa----a-ga-tta-tt--t-g--ct-g-----------g------g
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            174252 34 +    839153 G-ATGTGA--CA------CTTTGT-GAAA----A-GA-TTA-T--TT-GC-T--G-----------G------G
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1911471 29 +   2368649 C-ATG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949723 29 + 200372422 C-ATG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              38005 29 +     84244 C-ATG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17548934 28 -  53390261 C-A----A--TT------CATTGG-GATG----A-GA-A---T--TT-GC--t-g-----------a------a
i Condylura_cristata.JH655891.1                          C 0 I 4
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1340 39 +     23735 C-ATGTGA--GC------CTTTGGGGAAG----A-GA-T---T-TTT-GC-T--G-----------AGGAAA-A
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 50900 25 +     63868 C-ACTTGC--AC------ATTTGG-AAAG----A-GG-AAC---------------------------------
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 1
s Cricetulus_griseus.LT883664.1                           11668413 25 + 224834208 C-GCATGC--TC------CTTTGG-AAAG----G-GA-AAC---------------------------------
i Cricetulus_griseus.LT883664.1                          C 0 I 1
s Crocidura_indochinensis.CroInd_scaffold_37019               3824 33 -     19598 CTATATGA--CC------CCTTGA-GAAG----A-AA-T---T--TT-G-A-G-A-----------A------A
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 I 4
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29376 17 -     87169 ----------------------------C----A-GA-T---T-TTT-GC-T--G-----------AGA----A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 5 I 7
s Ctenodactylus_gundi.CteGun_scaffold_65                    837941 33 +   1526836 C-CCATGA--CT------GTTTGG-AAGG----A-GA-ATG-G---G-GGA---G-----------G------G
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 7
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  36738 34 +     51376 C-ACACGA--TC------CTTCCG-AAAG----A-GA-CCT-C---T-GC-T--G-----------G-A----G
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 4
s Dasypus_novemcinctus.JH564415.1                            64377 33 +   2246927 A-ACATGA--CA------CTTT-T-GAAG----A-GG-TTA-T--TT-CC-T--G-----------G------A
i Dasypus_novemcinctus.JH564415.1                        C 0 I 5
s Daubentonia_madagascariensis.ctg71                      12538149 34 -  12879189 C-ATA--TGACC------CTTTGG-AAAG----A-CA-TTT-T---T-GC-TA-A-----------G------G
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16812228 35 +  35494412 C-ACATGA--CC------CTTTGG-GAGG----A-GA-T---T--TTtgcata-g-----------a------a
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8630980 38 +  20541912 C-CCATGA--CC------CTTGAG-GAAG----A-GA-C---T-TTT-GC-T--G-----------AGAAAA-A
i Desmodus_rotundus.KZ672289.1                           C 0 I 3
s Dicerorhinus_sumatrensis.PEKH010002091.1                  674184 36 +   1390856 c-acatga--cc------cttTGG-GAAG----A-Ga-t---tt-ct-g--ct-g-----------a---ggaa
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6935 36 +    198055 C-ACATGA--CC------CTTTGG-GAAG----A-GA-T---T-TCT-GC-T--G-----------AGGA---A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37223 34 +     67921 C-ACATGG--CC------CTTCGC-AAAG----A-GA-ATT-T---T-GC-T--G-----------TG-----G
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 4
s Echinops_telfairi.JH980293.1                            48781634 32 + 111700974 T-ACGCTA--CC------TGTTAG-GAAA----A-GA-TTA-T--TT-GC-T--G-------------------
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.KE759718.1                                  11408 39 +     11740 t-acatga--cc------ctttgA-GAAG----A-GA-t---ttttt-c--ct-g-----------a-ggaaaa
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       311518 35 +    607251 t-acatgc--tc------ctttgG-GAGG----A-GA-T---Ttt-t-gcata-g-----------a------a
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1098589 33 +  10337057 T-GT---G--CC------C-TTGA-GTAA----A-TA-TTA-T--TT-TC-T--G-----------AGAA---G
i Elephantulus_edwardii.JH947257.1                       I 11 I 1
s Ellobius_lutescens.LOEQ01008920.1                          21384 24 -    110024 C-ACATGC--TC------CTTTGG-AAAG----A-G--AAC---------------------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 1
s Ellobius_talpinus.LOJH01081419.1                            1290 24 +      8657 C-ACATGC--TC------CTTTGG-AAAG----A-G--AAC---------------------------------
i Ellobius_talpinus.LOJH01081419.1                       C 0 I 1
s Enhydra_lutris.KZ291758.1                               16330191 14 -  41312741 ----------------------------C----A-GA-T---T-TTT-GC-T--A-----------A-------
i Enhydra_lutris.KZ291758.1                              I 5 I 6
s Eptesicus_fuscus.JH977646.1                              2146596 38 -  14770903 C-ACAGGA--CC------CTTGGG-GAAG----A-CA-C---T-TTT-G-GT--G-----------AGGAAA-A
i Eptesicus_fuscus.JH977646.1                            C 0 I 1
s Equus_asinus.JREZ01000139.1                              1284443 36 +   4378816 C-AAATGA--CC------cttttg-gaaa----a-ga-t---ttt-t-t-cT--G-----------AGA---CA
i Equus_asinus.JREZ01000139.1                            C 0 I 2
s Equus_caballus.CM000403.2                               18532263 36 -  39960074 C-AAATGA--CC------cttttg-gaaa----a-ga-t---ttt-t-t--ct-G-----------AGA---CA
i Equus_caballus.CM000403.2                              C 0 I 2
s Equus_przewalskii.KK951119.1                               34292 36 +    498745 C-AAATGA--CC------cttttg-gaaa----a-ga-t---ttt-t-t-cT--G-----------AGA---CA
i Equus_przewalskii.KK951119.1                           C 0 I 2
s Erinaceus_europaeus.JH835339.1                           3329132 30 -   7059049 T-A---GG--CC------CTTTGG-AAAG----A-GA-T---T-TTT-GC-T--A-----------A------G
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21206163 29 -  21539334 C-TTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11904 35 +    133382 c-acatga--cg------ctttGG-GAGG----A-GA-T---T--TTTGCATA-G-----------A------A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             25841 35 -     44125 C-ACATGA--CT------CTTTGG-GAGG----A-GA-T---T--TTTGCACA-G-----------A------A
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Eulemur_albifrons.k141_576796                              40995 34 -     44621 C-ACA--GGACC------CTTTGG-AAAG----A-GA-TTT-T---T-GC-TA-A-----------G------G
i Eulemur_albifrons.k141_576796                          C 0 I 1
s Eulemur_collaris.k141_377015                                7376 34 -     16928 C-ACA--GGACC------CTTTGG-AAAG----A-GA-TTT-T---T-GC-TA-A-----------G------G
i Eulemur_collaris.k141_377015                           C 0 I 1
s Eulemur_coronatus.k141_885031                              16408 34 -     25546 C-ACA--GGACC------CTTTGG-AAAG----A-GA-TTT-T---T-GC-TA-A-----------G------G
i Eulemur_coronatus.k141_885031                          C 0 I 1
s Eulemur_flavifrons.k141_1184614                            13604 34 +     26330 C-ACA--GGACC------CTTTGG-AAAG----A-GA-TTT-T---T-GC-TA-G-----------G------G
i Eulemur_flavifrons.k141_1184614                        C 0 I 1
s Eulemur_fulvus.k141_544389                                 14839 34 +     23973 C-ACA--GGACC------CTTTGG-AAAG----A-GA-TTT-T---T-GC-TA-A-----------G------G
i Eulemur_fulvus.k141_544389                             C 0 I 1
s Eulemur_macaco.k141_1562045                                13601 34 +     75513 C-ACA--GGACC------CTTTGG-AAAG----A-GA-TTT-T---T-GC-TA-G-----------G------G
i Eulemur_macaco.k141_1562045                            C 0 I 1
s Eulemur_mongoz.k141_232305                                 11531 34 +     97555 C-ACA--GGACC------CTTTGG-AAAG----A-GA-TTT-T---T-GC-TA-A-----------G------G
i Eulemur_mongoz.k141_232305                             C 0 I 1
s Eulemur_rubriventer.k141_774594                             1023 34 +     13026 C-ACA--GGACC------CTTTGG-AAAG----A-GA-TTT-T---T-GC-TA-G-----------G------G
i Eulemur_rubriventer.k141_774594                        C 0 I 1
s Eulemur_rufus.k141_1476633                                  5075 34 -     17153 C-ACA--GGACC------CTTTGG-AAAG----A-GA-TTT-T---T-GC-TA-A-----------G------G
i Eulemur_rufus.k141_1476633                             C 0 I 1
s Eulemur_sanfordi.k141_1122526                              14648 34 +    111500 C-ACA--GGACC------CTTTGG-AAAG----A-GA-TTT-T---T-GC-TA-A-----------G------G
i Eulemur_sanfordi.k141_1122526                          C 0 I 1
s Felis_catus.CM001381.2                                  20237833 18 + 206538554 ----------------------------C----A-GA-T---TTt-t-g--ct-g-----------a---gaga
i Felis_catus.CM001381.2                                 I 5 I 6
s Felis_catus_fca126.CM031415.1                           20196676 18 + 205367284 ----------------------------C----A-GA-T---TTt-t-g--ct-g-----------a---gaga
i Felis_catus_fca126.CM031415.1                          I 5 I 6
s Felis_nigripes.FelNig_flattened_line_20823                 10429 18 -     36744 ----------------------------C----A-GA-T---T-TTT-GC-T--G-----------AGA---GA
i Felis_nigripes.FelNig_flattened_line_20823             I 5 C 0
s Fukomys_damarensis.KN121974.1                             851276 33 +   3816255 C-ATATGA--TC------CTTTGC-AAAG----A-GA-TTT-T---T-GC-T--G-----------G------A
i Fukomys_damarensis.KN121974.1                          C 0 I 4
s Galago_moholi.ctg2040                                     427462 34 -    453645 C-ATA--TGATA------GTTTAG-AAAG----A-GA-TTT-T---T-GC-TA-G-----------G------A
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             5152 34 +     11339 C-ATA--TGATA------GTTTAG-AAAG----A-GA-TTT-T---T-GC-TA-G-----------G------A
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            2450 34 +     41679 C-ATA--TGATA------GTTTAG-AAAG----A-GA-TTT-T---T-GC-TA-G-----------G------A
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               2078  9 -      9135 T-ACATGA--CC--------------------------------------------------------------
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 I 8
s Giraffa_tippelskirchi.LVKQ01S007888.1                     609483 35 -    660261 c-acatgc--cc------ctttgG-GAGG----A-GA-T---ttt-t-gcaga-g-----------g------a
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Gorilla_beringei.k141_3596273                              16962 29 -     32273 C-ACA--A--AC------CTTTGG-AAAG----T-GA-TTT-T---T-G-----G-----------T------G
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578336.1                              33188564 29 -  33314783 C-ACA--A--AC------CTTTGG-AAAG----T-GA-TTT-T---T-G-----G-----------T------G
i Gorilla_gorilla.LT578336.1                             I 717 I 117
s Graphiurus_murinus.GraMur_scaffold_10447                   33485 32 +     78134 T-TCATGA--AC------CTTTGG-AAAG----A-GA-AT--T---T-GC-T--G-----------G------G
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 4
s Hapalemur_alaotrensis.k141_170648                           7703 34 -     19426 C-ACA--GGAGC------CTTTGG-AAAG----A-GA-TTT-T---T-GC-TA-G-----------G------G
i Hapalemur_alaotrensis.k141_170648                      C 0 I 1
s Hapalemur_gilberti.k141_488810                             12856 34 -     15286 C-ACA--GGAGC------CTTTGG-AAAG----A-GA-TTT-T---T-GC-TA-G-----------G------G
i Hapalemur_gilberti.k141_488810                         C 0 I 1
s Hapalemur_griseus.k141_1511508                             14495 34 +     18253 C-ACA--GGAGC------CTTTGG-AAAG----A-GA-TTT-T---T-GC-TA-G-----------G------G
i Hapalemur_griseus.k141_1511508                         C 0 I 1
s Hapalemur_meridionalis.k141_248335                         14596 34 -     41752 C-GCA--GGAGC------CTTTGG-AAAG----A-GA-TTT-T---T-GC-TA-G-----------G------G
i Hapalemur_meridionalis.k141_248335                     C 0 I 1
s Hapalemur_occidentalis.k141_907772                         14433 34 -     16460 C-ACA--GGAGC------CTTTGG-AAAG----A-GA-TTT-T---T-GC-TA-G-----------G------G
i Hapalemur_occidentalis.k141_907772                     C 0 I 1
s Helogale_parvula.HelPar_flattened_line_2585               243214 18 +    327341 ----------------------------C----A-GA-T---T-TTT-GC-T--G-----------AGGA---A
i Helogale_parvula.HelPar_flattened_line_2585            I 5 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18687 27 +     36099 C-ACATGC--CC------CTTCAG-CAGG----A-GA-T---T-TTT---------------------------
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 I 7
s Heterocephalus_glaber.JH602082.1                        20663034 31 +  22651954 C-ACATGA--TG------CTTTGT---AG----A-GA-TTt-t---t-g--ct-g-----------g------g
i Heterocephalus_glaber.JH602082.1                       C 0 I 4
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1769 32 +      7595 T-GTGTTA--CT------GTTTGG-GAAG----A-GA-TTA-T--CT-G--TT-A-------------------
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 I 2
s Hipposideros_armiger.JXIK01000431.1                       111369 38 +   1711038 C-ACACGA--CC------ATTTGG-GAAG----A-AT-T---TTt-a-g--ct-g-----------a-gaaaaa
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               42800 23 +     43066 C-ACACGA--CC------CTTTGG-GAAG----A-AT-T-----------------------------------
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 I 14
s Hoolock_leuconedys.ctg274                                    435763 29 +    630532 C-ACG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45919 18 +     55795 ----------------------------C----A-GA-T---T-TTT-GC-T--T-----------AGAA---A
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 5 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83928 33 +    135385 C-ACATGA--TC------CTTTGC-ACAG----A-AT-TTT-T---T-CC-T--G-----------G------G
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 2
s Ictidomys_tridecemlineatus.JH393364.1                    7521763 33 -   7955117 C-ACTTGa--tt------ctttgg-aaag----a-aa-ttt-t---T-GC-T--G-----------G------A
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 4
s Indri_indri.k141_3655594                                   23390 34 +     31101 C-ATA--GGACC------CTTTGG-AAAG----A-GA-TTT-T---T-GC-TA-G-----------G------A
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               23445 35 +     23964 C-ACATGA--CC------CTTTGG-GAGG----A-GA-T---T--TTTGCATA-G-----------A------A
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8278024 25 -   9596543 C-ACATAA--CC------CTTTGG-AAAT----G-GA-GTC---------------------------------
i Jaculus_jaculus.JH725527.1                             C 0 I 1
s Kogia_breviceps.KogBre_flattened_line_192630                2802 35 -      3359 C-ACGTGA--CC------CTTTGG-GAGG----A-GA-T---T--TTTGCACA-G-----------A------A
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_50988                    16034 38 +     29960 C-ACATGA--CC------TTTAAG-GAAG----A-CA-C---T-GTT-G-GT--G-----------AGGAAA-A
i Lasiurus_borealis.LasBor_scaffold_50988                I 134 I 32
s Lemur_catta.scaffold_24                                 15524948 34 -  30322482 C-ACA--GGAGC------CTTTGG-AAAG----A-GA-TTT-T---T-GC-TA-G-----------A------G
i Lemur_catta.scaffold_24                                C 0 I 1
s Leontocebus_fuscicollis.k141_1820339                        8884 29 +     64341 C-ACA--A--AC------CTTTGG-AAAG----A-GA-ATT-T---T-G-----G-----------T------G
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           1224 29 -     35062 C-ACA--A--AC------CTTTGG-AAAG----A-GA-ATT-T---T-G-----G-----------T------G
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        8911 29 +     35603 C-ACA--A--AC------CCTTGG-AAAG----A-GA-ATT-T---T-G-----G-----------T------G
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    30524 29 +     38576 C-ACG--A--AC------CTTTGG-AAAG----A-GA-ATT-T---T-G-----G-----------T------G
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         27228 29 +     66356 C-ACG--A--AC------CTTTGG-AAAG----A-GA-ATT-T---T-G-----G-----------T------G
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         11838 35 -     23766 C-ATA--GGATT------CTTTGG-AAAG----A-GA-TTT-T---T-GC-TACG-----------G------G
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29891 36 +     45836 C-ATA--GGACT------CTTTGG-AAAG----A-GATTTT-T---T-GC-TAGA-----------G------G
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          2437 35 +     25010 C-ATA--GGACT------CTTTGG-AAAG----A-GA-TTT-T---T-GC-TATG-----------G------G
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27831 36 +     54090 C-ATA--GGACT------CTTTGG-AAAG----A-GATTTT-T---T-GC-TAGA-----------G------G
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3043939 18 +   3914936 ----------------------------C----A-GA-T---T-TTT-G--ct-g-----------a---gaaa
i Leptonychotes_weddellii.KB714746.1                     I 5 I 3
s Lepus_americanus.LepAme_scaffold_107385                     7324 32 -     14121 C--AAGGG--GT------CCTTGA-AAAG----A-GT-TAT-T---T-CC-T--G-----------G------C
i Lepus_americanus.LepAme_scaffold_107385                I 6 C 0
s Lipotes_vexillifer.KE559953.1                             268496 35 -    662738 C-ACATGA--CC------CTTTGG-GAGG----A-GA-T---G--TTtgcata-g-----------a------a
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1438114 29 +   1826925 C-GTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            6702 34 +     11245 C-ATA--TGATG------GTTTAG-AAAG----A-GA-TTT-T---T-GC-TA-G-----------G------A
i Loris_lydekkerianus.k141_2539221                       C 0 C 0
s Loris_tardigradus.ctg83                                  1005523 34 +   6120653 C-ATA--TGATG------GTTTAG-AAAG----A-GA-ATT-T---T-GC-TA-G-----------G------A
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4218228 32 -  43346337 C-ACGTTA--TC------CTTTGG-GAAA----A-GA-TCA-T--TT-GC-T--G-------------------
i Loxodonta_africana.GL010049.1                          C 0 I 2
s Lycaon_pictus.CM007581.1                                17956216 14 -  59628241 ----------------------------T----A-GA-T---T-TTT-GC-T--G-----------A-------
i Lycaon_pictus.CM007581.1                               I 5 I 1
s Macaca_arctoides.k141_2326796                               7929 29 +     40492 C-GTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59677188 29 +  60120075 C-GTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13704 29 -     26193 C-ATG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            81488 29 -    114318 C-ATG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  7175 29 -     23192 C-ATG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16648 29 -     29190 C-ATG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  25213 29 +     37952 C-ATG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186840302 29 + 187317192 C-ATG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458865 29 -  25927173 C-ATG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  81061 29 +     89720 C-ATG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 8062 29 +     20474 C-ATG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   7862 29 -     14993 C-ATG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  330728 29 -    668171 C-ATG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 6175 29 -     24072 C-GTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26800 29 -     45290 C-ATG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91502 39 +     94391 T-ACATGA--CC------CTTTGG-GAAG----A-GA-T---TTTTT-CC-T--G-----------AGGAAA-A
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23938391 29 -  24302211 C-GTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352513 29 +    752769 C-GTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              19120 36 +    737560 C-ACAAGA--CC------ATCTGA-GAAG----A-GA-T---TTt-t-g--ct-g-----------a---gaaa
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              51106 36 -    317179 C-ACAAGA--CC------ATCTAA-GAAG----A-GA-T---TTt-t-g--ct-g-----------a---gaaa
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33103958 33 -  40650429 C-ACTTGa--tt------ctttgg-aaag----a-aa-ttt-t---t-gC-T--G-----------G------A
i Marmota_marmota.CZRN01000018.1                         C 0 I 4
s Megaderma_lyra.MegLyr_scaffold_4542                        14219 38 -    207569 C-ACATGA--CCCTGACCCTTTGG-GAAG----A-GA-T---T-TCT-GC-T--G-----------A-------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 3
s Mellivora_capensis.MelCap_flattened_line_69365             10931 14 +     13704 ----------------------------C----A-GA-T---T-TTT-GC-T--A-----------A-------
i Mellivora_capensis.MelCap_flattened_line_69365         I 5 I 6
s Meriones_unguiculatus.MerUng_scaffold_7390                 33611 25 +    140813 C-ACATGC--TC------CTTTGG-AATG----G-GA-AGG---------------------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 1
s Mesocricetus_auratus.KB708134.1                         12183075 25 -  29670104 C-ACATGC--TC------CTttgg-aaag----g-ga-aac---------------------------------
i Mesocricetus_auratus.KB708134.1                        C 0 I 1
s Mesoplodon_bidens.MesBid_scaffold_108144                    4113 35 +     10310 C-ACATGA--CT------CTTTGG-GAGG----A-GA-T---T--TTTGCATA-G-----------A------A
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Mico_argentatus.k141_1239457                                7041 29 -      7380 C-ATG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_schneideri.k141_1950671                                      7014 29 -      7356 C-ATG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18292384 42 -  93316391 C-ATA--GGACC------CTTTGG-AAAG----A-GA-TTT-T---T-GC-TA-G---TGGGCGGAG------G
i Microcebus_murinus.CM007674.1                          C 0 I 2
s Microgale_talazaci.MicTal_scaffold_6613                    23539 32 -    145209 T-CTGTTA--CC------TGTTAG-GAAA----A-GA-GTA-T--TT-GC-T--G-------------------
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                16521 38 -     19307 C-ACATGA--CC------CTTGAG-GAAG----A-GA-C---T-TTT-G--TT-G-----------AGAAAA-A
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 3
s Microtus_ochrogaster.CM001695.1                         11261369 24 -  27267610 C-ACGTGc--tc------ctttgg-aaac----a-a--aac---------------------------------
i Microtus_ochrogaster.CM001695.1                        C 0 I 1
s Miniopterus_natalensis.LDJU01000034.1                    1851475 36 +   8254450 C-ACATGG--CC------CCGAGG-GAAA----A-CA-C---T-TTG-GC-T--G-----------AGAA---G
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             35155 36 +     64694 C-ACACGG--CC------CCGAGG-GAAA----A-CA-C---T-TTG-GC-T--G-----------AGAA---A
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                          10097 29 -     28506 C-TTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6804 18 -      8324 ----------------------------C----A-GA-T---T-TTT-GC-T--G-----------AGAA---A
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 5 C 0
s Mirza_zaza.k141_952172                                      9928 42 -     37649 C-ATA--GGACC------CTTTGG-AAAG----A-GA-TTT-T---T-GC-TA-G---TGGGCGGAG------G
i Mirza_zaza.k141_952172                                 C 0 I 2
s Monodon_monoceros.MonMon_M_scaffold_103                    27617 35 -    437263 C-ACATGA--CC------CTTTGG-GAGG----A-GA-T---T--TTTGCATA-G-----------A------A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142521 39 -    366855 C-ACATGA--CA------AGTAGG-AAAG----A-CA-T---T-TTT-GC-T--G-----------AAAAAAAA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 3
s Moschus_moschiferus.MosMos_scaffold_13123                   1563 35 +     82753 C-ACACAC--CC------CTTCGG-GAGG----A-GA-T---T-TTT-GCACA-G-----------A------A
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   36314 18 +     37127 ----------------------------C----A-GA-T---T-TTT-GC-T--G-----------AGGA---A
i Mungos_mungo.MunMun_flattened_line_23663               I 5 C 0
s Murina_feae.MurFea_scaffold_85699                           7699 37 +     14753 C-ACATGA--CC------CTTAAA-GAGG----A-CA-C---T-TTT-G-GT--G-----------A-AAAA-A
i Murina_feae.MurFea_scaffold_85699                      C 0 I 1
s Mus_caroli.LT608237.1                                   84362226 26 - 120012414 C-CCATGC--TC------CTTTGG-AATG----GGGG-AAC---------------------------------
i Mus_caroli.LT608237.1                                  C 0 I 1
s Mus_musculus.chr8                                       87651219 26 - 129401213 C-CCATGC--TC------CTTTGA-AATG----GCTG-Aac---------------------------------
i Mus_musculus.chr8                                      C 0 I 1
s Mus_pahari.LT608297.1                                   31355873 26 -  89631738 C-ACATGC--TC------CTTTGG-AATA----GGGG-AAC---------------------------------
i Mus_pahari.LT608297.1                                  C 0 I 1
s Mus_spretus.CM004101.1                                  90753282 26 - 130317789 C-CCATGC--TC------CTTTGG-AATG----GGTG-AAC---------------------------------
i Mus_spretus.CM004101.1                                 C 0 I 1
s Mustela_putorius.JH418006.1                               302343 13 -  14710649 ----------------------------C----A-TA-T---T-TTT-g--ct-a-------------------
i Mustela_putorius.JH418006.1                            I 5 I 6
s Myocastor_coypus.MyoCoy_scaffold_10123                     72057 34 -     80779 C-ACATGA--TC------CTTTGC-AAAG----A-GA-CTT-T---T-GC-T--G-----------GG-----G
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 I 4
s Myotis_brandtii.KE162005.1                                281339 37 -  10118263 T-ACATGA--CC------CTTGGA-GAAG----A-CA-C---T-TTt-g--gt-g-----------g--gaaaa
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1588595 37 -   6019432 T-ACATGA--CC------CTTGGA-GAAG----A-TA-C---ttt-t-g--gt-g-----------a--gaaaa
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3904691 37 -   4330536 T-ACATGA--CC------CTTGGA-GAAG----A-CA-C---TTt-t-g--gt-g-----------g--gaaaa
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_353577                         293 37 -      1254 T-ACATGA--CC------CTTGGA-GAAG----A-CA-C---T-TTT-G-GT--G-----------AGAAA--A
i Myotis_myotis.MyoMyo_scaffold_353577                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190119 35 +    196477 A-ACATGA--CA------CTTTAT-GAAG----A-GA-TTA-T--TT-GCA---G-----------A-----TA
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 I 3
s Nannospalax_galili.KL204047.1                            2034910 25 -   3037898 C-ACATGA--TC------CTTTGA-GAAG----G-GG-AAC---------------------------------
i Nannospalax_galili.KL204047.1                          C 0 I 2
s Nasalis_larvatus.k141_413338                               16099 29 +     21681 C-TTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308393 18 +  31847680 ----------------------------C----A-GA-T---T-TTT-GC-T--G-----------a---gaaa
i Neomonachus_schauinslandi.NINY01007730.1               I 5 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5866574 35 +   7148211 C-ACATGA--CC------CTTTGG-GAGG----A-GA-T---T--TTtgcata-g-----------a------a
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    758738 42 +    783361 C-ACGTGA--CC------CTTGGG-GAAGAAAGA-GA-C---T-TTT-GC-T--G-----------AGAAAA-A
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 7
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150278 14 -   9404916 ----------------------------T----A-GA-T---T-TTT-GC-T--G-----------A-------
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 5 I 1
s Nycticebus_bengalensis.LG01                            102587068 34 - 196305487 C-ATA--TGACA------GTTTAG-AAAG----A-GA-TTT-T---T-GC-TA-G-----------G------A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                              992 34 +      2075 C-ATA--TGACA------GTTTAG-AAAG----A-GA-TTT-T---T-GC-TA-G-----------G------A
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105762423 34 + 199412804 C-ATA--TGACA------GTTTAG-AAAG----A-GA-TTT-T---T-GC-TA-G-----------G------A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1364711  8 +   3988456 ---------------------------------A-GA-TAT-T---T---------------------------
i Ochotona_princeps.JH802162.1                           I 20 C 0
s Odobenus_rosmarus.KB229312.1                              507535 18 -   2017862 ----------------------------C----A-GA-T---T-TTT-G--ct-g-----------a---gaaa
i Odobenus_rosmarus.KB229312.1                           I 5 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          77400 32 -    150152 c-acatgc--cc------ctttgG-G-------A-GA-T---ttt-t-gcaga-g-----------g------a
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 6
s Ondatra_zibethicus.OndZib_scaffold_46174                   26017 25 +     28053 C-ACATGC--TC------CTTTGG-AAAG---GG-G--AAC---------------------------------
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 1
s Onychomys_torridus.OnyTor_scaffold_2986                    81053 25 +    102263 C-ACATGC--TT------TTTGGG-GAAG----G-GG-AAC---------------------------------
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 1
s Orcinus_orca.KB316932.1                                  2782497 35 -  10937097 C-ACATGA--CC------CTTTGG-GAGG----A-GA-T---T--TCtgcata-g-----------a------a
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387              10988 35 -     18566 C-ATATTG--CC------CTTTGG-GAAA----A-GA-TTA-T--TT-GC-T--G-----------A-----TG
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 I 1
s Oryctolagus_cuniculus.CM000791.1                        67148183 32 + 174332312 C--AAAGG--GT------CCTTGA-AAAG----A-GA-TAT-T---T-CC-T--G-----------G------C
i Oryctolagus_cuniculus.CM000791.1                       I 6 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       463228 14 -    559221 ----------------------------T----A-GA-T---T-TTT-GC-T--G-----------A-------
i Otocyon_megalotis.JAEUCK010005147.1                    I 5 I 1
s Otolemur_crassicaudatus.k141_222918                         4977 34 +      8798 C-ATG--TGATA------GTTTAG-AAAG----A-GA-TTT-T---T-GC-TA-G-----------G------A
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             697139 34 -   1103335 C-ATG--TGATA------GTTTAG-AAAG----A-GA-TTT-T---T-GC-TA-G-----------G------A
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   17586662 27 +  44047080 C-ACATGC--CC------CTTCGG-CAGG----A-ga-t---ttt-t---------------------------
i Ovis_aries.CM001607.2                                  C 0 I 7
s Ovis_canadensis.OviCan_scaffold_2572                      174639 27 -    191736 c-acatgc--cc------cttcgG-CAGG----A-GA-T---T-TTT---------------------------
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 I 7
s Pan_paniscus.KQ411613.1                                    45050 29 +     80009 C-ACG--A--GC------CTTTGG-AAAG----T-GA-TTT-T---T-G-----G-----------T------G
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189143948 29 + 189151597 C-ACG--A--AC------CTTTGG-AAAG----T-GA-TTT-T---T-G-----G-----------T------G
i Pan_troglodytes.CM009242.2                             I 42 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152037 18 +    230217 ----------------------------C----A-GA-T---T-TTT-GC-T--G-----------AGA---GA
i Panthera_onca.PanOnc_flattened_line_3271               I 5 C 0
s Panthera_pardus.KV860321.1                                265246 18 +  18783137 ----------------------------C----A-GA-T---T-Tct-g--ct-g-----------a---gaga
i Panthera_pardus.KV860321.1                             I 5 C 0
s Panthera_tigris.KE722367.1                               4722126 18 -   8748460 ----------------------------G----A-GA-T---T-Tct-g--ct-g-----------a---gaga
i Panthera_tigris.KE722367.1                             I 5 C 0
s Pantholops_hodgsonii.KE114653.1                          1265556 27 -   2937107 A-ACATGC--CC------CTTCAG-CAGG----A-GA-T---T-TTt---------------------------
i Pantholops_hodgsonii.KE114653.1                        C 0 I 8
s Papio_anubis.CM001495.2                                183444191 29 + 183742232 C-GTG--A--AC------CTTTGG-AAAG----A-GG-TTT-T---T-G-----G-----------T------G
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7837 29 +     20448 C-GTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20564649 29 +  20919399 C-GTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6581 29 +     41871 C-GTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     9874 29 +     27711 C-GTG--A--AC------CTTTGG-AAAG----A-GG-TTT-T---T-G-----G-----------T------G
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                   871 29 -     11374 C-GTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13534 18 -     78924 ----------------------------C----A-GA-T---T-TTT-GC-T--G-----------AGAA---A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 8 C 0
s Perodicticus_ibeanus.k141_855320                           10968 34 +     13100 C-ATA--TGACA------GTTTAG-AAAG----A-GA-TTT-T---T-GC-TA-G-----------G------A
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             9362 34 +     25941 C-ATA--TGACA------GTTTAG-AAAG----A-GA-TTT-T---T-GC-TA-G-----------G------A
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18195633 25 -  18517816 C-ACATGC--TT------CTTTGG-GAAG----G-GG-AAC---------------------------------
i Peromyscus_maniculatus.KI615324.1                      C 0 I 1
s Petromus_typicus.PetTyp_scaffold_42190                     28937 33 -     29689 C-ACATGA--TC------TTTTGC-AAAG----A-GA-TTT-T---T-GC-T--G-----------G------G
i Petromus_typicus.PetTyp_scaffold_42190                 I 11 I 4
s Phocoena_phocoena.PhoPho_flattened_line_24159               9536 35 +     63832 C-ACATGA--CC------CTTTGG-GAGG----A-GA-T---T--TTTGCATA-G-----------A------A
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           44590 29 +     62158 C-ATG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        39337 29 +     89929 C-ATG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40753 29 +     51399 C-ATG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14296992 29 -  14605196 C-ATG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2631 38 +     22620 C-ACATGA--TC------ATTGAG-GAAG----A-TA-T---T-TTT-G-GT--G-----------AGGGAA-A
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 3
s Platanista_gangetica.PlaMin_flattened_line_32310           35242 35 +     35617 C-ACATGA--CC------CTTTGG-GAGG----A-GA-G---T--TTTGCACA-G-----------A------A
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189132093 29 + 189387572 C-ACG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Pongo_abelii.CM009266.2                                T 24570 C 0
s Pongo_pygmaeus.ctg66                                     9571700 29 +   9816681 C-ACG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               74274 29 -     81375 C-TTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              6095 29 +     19060 C-TTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 14224 32 -     22811 T-GTGTTA--CT------GTTTGG-GAAG----A-GA-TTA-T--CT-G--TT-A-------------------
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 I 2
s Prolemur_simus.MPIZ01000396.1                            2597628 34 -   4620579 C-ACA--GGAGC------CTTTGG-AAAG----A-GA-TTT-T---T-GC-TA-G-----------G------G
i Prolemur_simus.MPIZ01000396.1                          C 0 I 1
s Propithecus_coquerelli.NW_012148875.1                     991611 34 +   2598838 C-ATA--GGACC------CTTTGG-AAAG----A-GA-TTT-T---T-GC-TA-G-----------G------G
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 3
s Propithecus_coronatus.k141_347390                          29923 34 +     38485 C-ATA--GGACC------CTTTGG-AAAG----A-GA-TTT-T---T-GC-TA-G-----------G------G
i Propithecus_coronatus.k141_347390                      C 0 I 3
s Propithecus_diadema.k141_58108                              1965 34 -     13098 C-ATA--GGACC------CTTTGG-AAAG----A-GA-TTT-T---T-GC-TA-G-----------G------G
i Propithecus_diadema.k141_58108                         C 0 I 3
s Propithecus_edwardsi.k141_1176054                          27444 34 +     35766 C-ATA--GGACC------CTTTGG-AAAG----A-GA-TTT-T---T-GC-TA-G-----------G------G
i Propithecus_edwardsi.k141_1176054                      C 0 I 3
s Propithecus_perrieri.k141_1200571                           5631 34 -     24134 C-ATA--GGACC------CTTTGG-AAAG----A-GA-TTT-T---T-GC-TA-G-----------G------G
i Propithecus_perrieri.k141_1200571                      C 0 I 3
s Propithecus_tattersalli.k141_790011                        29456 34 -     67325 C-ATA--GGACC------CTTTGG-AAAG----A-GA-TTT-T---T-GC-TA-G-----------G------G
i Propithecus_tattersalli.k141_790011                    C 0 I 3
s Propithecus_verreauxi.k141_956661                           5679 34 -      6182 C-ATA--GGACC------CTTTGG-AAAG----A-GA-TTT-T---T-GC-TA-G-----------G------G
i Propithecus_verreauxi.k141_956661                      C 0 I 3
s Psammomys_obesus.NESX01036370.1                            11257 25 -     21651 C-ACATGC--TC------CTTTGG-AATG----G-GG-AGG---------------------------------
i Psammomys_obesus.NESX01036370.1                        C 0 I 1
s Pteronotus_parnellii.KE909381.1                            16029 39 -     21811 C-ACATGA--CC------CGTGGG-GAAG----A-GG-C---TTt-t-g--ct-g-----------aggaaaaa
i Pteronotus_parnellii.KE909381.1                        C 0 I 3
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41126 14 +     42204 ----------------------------C----A-GA-T---T-TTT-GC-T--A-----------A-------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 5 I 6
s Pteropus_alecto.KB030862.1                              22977648 38 +  28871421 T-ACATGA--CT------CTTTGG-GAAG----A-GA-t---ttt-t-c--ct-g-----------a-ggaaaa
i Pteropus_alecto.KB030862.1                             C 0 I 4
s Pteropus_vampyrus.KN534172.1                                7701 38 -      8028 T-ACATGA--CT------CTTTGG-GAAG----A-Ga-t---ttt-t-c--ct-g-----------a-ggaaaa
i Pteropus_vampyrus.KN534172.1                           C 0 I 4
s Puma_concolor.QAVW01001104.1                            20275198 18 -  38429054 ----------------------------C----A-GA-T---Ttt-t-g--ct-g-----------a---gaga
i Puma_concolor.QAVW01001104.1                           I 5 C 0
s Pygathrix_cinerea.k141_1153803                             16081 29 -     91421 C-TTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7610201 29 +   7812017 C-TTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             16080 29 -     72585 C-TTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6139 35 +     55207 c-acatgc--tc------ctttgG-GAGG----A-GA-T---T-TTT-GCATA-G-----------A------A
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53571473 25 +  90668790 C-ATGTGC--TT------CTTTGG-AATG----G-GG-AAC---------------------------------
i Rattus_norvegicus.chr16                                C 0 I 1
s Rhinolophus_sinicus.LVEH01000134.1                        367857 38 -   3329780 C-ACACGA--CC------CTCTGG-GAAG----A-AT-T---Ttt-t-g--tt-g-----------a-ggaaaa
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             7791 29 -     11128 C-TTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91237140 29 - 195417433 C-TTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672796 29 +   7961872 C-TTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88685 38 -     96226 t-acatga--cc------ctttgG-GAAG----A-GA-T---T-TTT-CC--C-A-----------AGGAAA-A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_8081                                  2198 29 +     42994 C-ACA--A--AC------CTTTGG-AAAG----A-GA-ATT-T---T-G-----A-----------T------G
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                              893 29 +      2253 C-ACA--A--AC------CTTTGG-AAAG----A-GA-ATT-T---T-G-----A-----------T------G
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               1322 29 -      8737 C-ACA--A--AC------CTTTGG-AAAG----A-GA-ATT-T---T-G-----A-----------T------G
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                               975 29 +      2343 C-ACA--A--AC------CTTTGG-AAAG----A-GA-ATT-T---T-G-----A-----------T------G
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209475852 29 + 209938924 C-ACA--A--AC------CTTTGG-AAAG----A-GA-ATT-T---T-G-----A-----------T------G
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                 298 29 -      7576 C-ACA--A--AC------CTTTGG-AAAG----A-GA-ATT-T---T-G-----A-----------T------G
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951921 29 - 121099817 C-ACG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24263 29 +     46362 C-ACG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               24358 29 +     45824 C-ACG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             41037 29 -     64574 C-ACG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4110 29 -     23631 C-ACG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 24254 29 -     61129 C-ACG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5421604 29 -   5703754 C-ACG--A--AC------CTTTGC-AAAG----A-GA-TTT-T---T-G-----T-----------T------G
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          56845 29 -     80660 C-ACG--A--AC------CTTTGC-AAAG----A-GA-TTT-T---T-G-----T-----------T------G
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154074 29 -    313613 --C--GAA--TC------CTTTGG-GATG----A-GA-G---A--GT-GC-T--G-----------A------A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 4
s Semnopithecus_entellus.k141_1672505                          972 29 -     12572 C-GTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27822 29 +     39453 C-GTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            8340 29 +     27826 C-GTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             7862 29 -     19483 C-GTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      1163 29 -     12762 C-GTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           1024 29 +     13763 C-GTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     1166 25 -     30804 C-ACATGC--TC------CTTTGG-AAAG----A-GG-AAC---------------------------------
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 I 1
s Solenodon_paradoxus.SolPar_flattened_line_126               4626 32 +   1910179 C-AAGTAA--CC------CTTTGG-AAAG----A-AA-A---T--TT-GC-T--G-----------A------G
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13651871 32 -  18376816 C-ACATGA--CC------CTTCAG-AAAG----A-GA-A---T--AT-GC-T--G-----------A------G
i Sorex_araneus.JH798187.1                               C 0 I 4
s Spermophilus_dauricus.KZ294078.1                         1954816 33 -   3870691 C-ACTTGA--TT------CTTTGG-AAAG----A-AA-TTT-T---T-GC-T--G-----------G------A
i Spermophilus_dauricus.KZ294078.1                       C 0 I 4
s Spilogale_gracilis.SpiGra_flattened_line_13525             31617 20 +     97271 ----------------------------C----A-GA-T---T-TTT-G--TT-A-----------AGAAAA-A
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 5 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              19216 18 -    196729 ----------------------------C----A-GA-T---T-TTT-GC-T--G-----------AGAA---A
i Suricata_suricatta.SurSur_flattened_line_6629          I 5 C 0
s Sus_scrofa.JH118708.1                                      37266 44 -     47482 G-ACAGGG--CC------CTTTGG-AATA----A-GA-T--AT--TT-GC--t-gtggaaaaaaagc------a
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                11684 38 +     41958 C-ACAGGA--CC------CTTGAG-GAAG----A-CA-C---T-TTT-GC-T--G-----------AGAAAA-A
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73479 35 +    116680 A-ACATGA--CA------CTTTAT-GAAG----A-GA-TTA-T--TT-GCA---G-----------A-----TG
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      119644 32 -    156842 C-ACATGA--CC------CTTTGG-GGAG----A-GA-T---T-TTT-GC-T--G-----------A-------
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 2
s Tapirus_terrestris.TapTer_scaffold_755                    388117 32 +    539355 C-ACATGA--CC------CTTTGG-GGAG----A-GA-T---T-TTT-GC-T--G-----------A-------
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 2
s Theropithecus_gelada.CM009954.1                        186429509 29 + 186847797 C-GTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106241 33 +    114563 C-ACATGA--TG------CTTTAC-AAAG----A-GA-TTT-T---T-GC-T--G-----------G------G
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 4
s Tolypeutes_matacus.TolMat_scaffold_228639                   7248 34 +      8208 A-ACATGG--CA------GTTTGT-GAAG----A-GA-TTA-T--TT-GC-T--G-----------G------G
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 I 5
s Tonatia_saurophila.TonSau_scaffold_294                     82077 38 +    610378 C-ACATGA--CC------CTTGAG-GAAG----A-GA-C---T-TTT-GC-T--G-----------AGAAAA-A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 3
s Trachypithecus_auratus.k141_722599                         11913 29 -     20410 C-GTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      1027 29 -     12674 C-GTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       12014 29 +     19930 C-GTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       8425 29 -     19997 C-GTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48564 29 -     60166 C-GTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        16036 29 -     27529 C-GTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     15980 29 -     18194 C-GTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9692 29 -     21137 C-GTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    8395 29 -     10723 C-GTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7567 29 +      9834 C-GTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        25880 29 +     32220 C-GTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5939982 29 +   6242583 C-GTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        9233 29 +     20839 C-GTG--A--AC------CTTTGG-AAAG----A-GA-TTT-T---T-G-----G-----------T------G
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                     491 35 +     27266 C-ACATGA--CC------CTTTGG-GAGG----A-GA-T---T-TTG-CTATA-G-----------A------A
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Trichechus_manatus.JH594705.1                            4294132 32 +  10818551 C-GTGTTA--CC------CTTTGG-GAAA----A-GA-TTA-T--TT-GC-T--G-------------------
i Trichechus_manatus.JH594705.1                          C 0 I 2
s Tupaia_chinensis.KB320699.1                              2156659 31 +   4065304 C-ACA--G--CC------CTTCGT-GAAG----A-GA-TTT-C---C-G--TT-G-----------C------A
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                    10102 31 -     10553 C-ACA--A--CC------CTTTGG-AAAG----A-GA-TTT-T---T-G--TT-G-----------C------A
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15738736 35 +  33153633 c-acatga--cc------ctttgG-GAGG----A-GA-T---T--TCtgcata-g-----------a------a
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54167 30 -     77625 C-A--GGA--GC------CTTTGG-GAAG----A-GA-A---T--CT-GC-T--G-----------A------A
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4851313 18 -   5085361 ----------------------------C----A-GA-T---T-TTT-G--ct-g-----------a---gaaa
i Ursus_maritimus.KK499267.1                             I 5 C 0
s Varecia_rubra.k141_590885                                  12288 34 +     50397 C-ACA--GGACC------CTTTGG-AAAG----A-GA-TTT-T---T-GC-TG-G-----------G------G
i Varecia_rubra.k141_590885                              I 3 C 0
s Varecia_variegata.k141_1128296                             12347 34 +     24756 C-ACA--GGACC------CTTTGG-AAAG----A-GA-TTT-T---T-GC-TG-G-----------G------G
i Varecia_variegata.k141_1128296                         I 3 C 0
s Vicugna_pacos.KN270157.1                                 5372644 39 -   5488506 G-ACATGA--TC------CTTTGG-GAGG----A-AACA---tt--t-g--ct-gag-agaaa---a-------
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 11676 14 -     43706 ----------------------------T----A-GA-T---T-TTT-GC-T--G-----------A-------
i Vulpes_lagopus.VulLag_flattened_line_30954             I 5 I 1
s Xerus_inauris.XerIna_scaffold_2302                          1949 33 +    224448 C-ACGTGA--TC------CTTTGG-AAAG----A-AA-TTT-T---T-GC-T--G-----------G------G
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 4
s Zapus_hudsonius.ZapHud_scaffold_11398                      15752 25 +     63895 C-ATATGA--CC------CTTTGG-AAAT----A-GA-GCC---------------------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 1
s Ziphius_cavirostris.ZipCav_flattened_line_3601914             91 35 +       295 C-ACATGA--CT------CTTTGG-GAGG----A-GA-T---T--TTTGCATA-G-----------A------A
i Ziphius_cavirostris.ZipCav_flattened_line_3601914      C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Tarsius_wallacei.k141_254427                                1877  3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080  3 +     70052 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Glis_glis.GliGli_scaffold_19807                            32063  0 +     49224 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cephalopachus_bancanus.k141_1423433                         6085  3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Carlito_syrichta.NW_007259797.1                           156587  3 -    496798 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       7736 30 +     62944 G-----GA-------A----------A-------------G-------ATA-----TG-----CTCAGAAAA-AA-GTTGGC--TG
s Acinonyx_jubatus.LLWD01001279.1                           828209 31 -   1699592 -------a-----aaa---------aa-------------c-------aaa-----aa-----ctca-gaaacAG-CATGGC--TG
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     71688 24 +     87051 --------------------------G-------------A--------G------TG-----CTCA-GAAACAA-GTTGAT--TG
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 1 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511484 41 -  29979442 -------a-----caa-----caacaa-------------ca------aaccaggaGA-----CTCA-GAAACAA-CTTGGC--TG
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             80225 38 -    347723 --------------------------a-------------caacaacaaaccagggGA-----CTCA-GAAACAA-CTAGGC--TG
i Ailurus_fulgens.LNAC01001112.1                         I 3 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     75389 25 -     89534 --------------------------G-------------A-------AG------TT-----CTCA-GAGACAA-GTTGGC--TG
i Allactaga_bullata.AllBul_scaffold_9566                 I 1 C 0
s Allenopithecus_nigroviridis.k141_3361533                   15665 27 -     52922 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCT-GAAA-AA-GTTG----TG
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15585 27 -     28001 G-----GA-------A----------A-------------A-------ATG-----TG-----CTCT-GAAA-AA-GTTG----TG
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          6083 27 -     18505 G-----GA-------A----------A-------------A-------ATG-----TG-----CTCT-GAAA-AA-GTTG----TG
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           6935 27 -     12518 G-----GA-------A----------A-------------A-------ATG-----TG-----CTCT-GAAA-AA-GTTG----TG
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              8508 29 +     51355 G-----GA-------A----------A-------------A-------ATG-----TG-----CTCA-AAAA-AC-ATTGGC--TG
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                1617 29 -     36483 G-----GA-------A----------A-------------A-------ATG-----TG-----CTCA-AAAA-AC-ATTGGC--TG
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              12069 29 +     28687 G-----GA-------A----------A-------------A-------ATG-----TG-----CTCA-AAAA-AC-ATTGGC--TG
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                  582 29 +     27940 G-----GA-------A----------A-------------A-------ATG-----TG-----CTCA-AAAA-AC-ATTGGC--TG
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            1626 29 -      9457 G-----GA-------A----------A-------------A-------ATG-----TG-----CTCA-AAAA-AC-ATTGGC--TG
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                              582 29 +     30492 G-----GA-------A----------A-------------A-------ATG-----TG-----CTCA-AAAA-AC-ATTGGC--TG
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              4577 29 +     47717 G-----GA-------A----------A-------------A-------ATG-----TG-----CTCA-AAAA-AC-ATTGGC--TG
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              1309 29 +      5663 G-----GA-------A----------A-------------A-------ATG-----TG-----CTCA-AAAA-AC-ATTGGC--TG
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             15761 29 +     50774 G-----GA-------A----------A-------------A-------ATG-----TG-----CTCA-AAAA-AC-ATTGGC--TG
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          676398 33 -   2318259 -------a-------a-----aagaaa-------------a-------tgc-----tc-----cTCA-GAAACAA-CTTGGC--TG
i Ammotragus_lervia.NIVO01071767.1                       I 8 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      186274 20 +    412891 --------------------------------------------------------TA-----CTCA-TA-ACCT-CTTTGC--TG
i Anoura_caudifer.AnoCau_scaffold_1412                   I 3 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             98879 33 -    100397 -------A-------AAA-A-A---AA-------------A-------TAC-----TA-----CTCA-GAAACAA-CTTGGC--TG
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aotus_azarae.k141_3104676                                  16750 29 -     33861 G-----GA-------A----------A-------------A-------AAG-----TG-----CTCA-AAAA-AC-ATTGGC--CA
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            16747 29 -     34016 G-----GA-------A----------A-------------A-------AAG-----TG-----CTCA-AAAA-AC-ATTGGC--CA
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299174 29 -   5030052 G-----GA-------A----------A-------------A-------AAG-----TG-----CTCA-AAAA-AC-ATTGGC--CA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             16783 29 -     34685 G-----GA-------A----------A-------------A-------AAG-----TG-----CTCA-AAAA-AC-ATTGGC--CA
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               29908 29 -     47192 G-----GA-------A----------A-------------A-------AAG-----TG-----CTCA-AAAA-AC-ATTGGC--CA
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13521 25 +     20879 --------------------------T------------AA-------AG------TA-----CTCA-TTAACAA-T-TGGT--TG
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 4 C 0
s Arctocebus_calabarensis.k141_2318572                       12193 30 +     14667 G-----AA-------A----------G-------------A-------AAG-----TC-----CTCA-GAAACAA-CTTGGC--TG
i Arctocebus_calabarensis.k141_2318572                   C 0 I 2
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5659 20 +     43469 --------------------------------------------------------TA-----CTCC-TA-ACCT-CTTTGC--TG
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 3 C 0
s Avahi_laniger.k141_765380                                  54605 26 -     92717 --------------------------A-------------A-------AAG-----CG-----CTCA-GAACCAA-GCTGGC--TG
i Avahi_laniger.k141_765380                              I 3 I 2
s Avahi_peyrierasi.k141_1424874                              55236 26 +     85213 --------------------------A-------------A-------AAG-----CG-----CTCA-GAACCAA-GCTGGC--TG
i Avahi_peyrierasi.k141_1424874                          I 3 I 2
s Balaenoptera_acutorostrata.KI537508.1                   15192627 34 +  23207421 -------a-------a---------aa-a-atat------a-------tac-----ta-----ctcA-GATACAA-CTTGGC--TG
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         3092 34 -     18090 -------a-------a---------aa-a-atat------a-------tac-----ta-----ctCA-GATACAA-CTTGGC--TG
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    27320 33 +     34529 -------A-------AAAGA-A----A-------------A-------TAC-----TA-----CTCA-GACACGA-CTTGGC--TG
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    200378 33 -    288883 -------a-------a-----aagaaa-------------a-------tac-----ta-----ctca-gacacaa-cttggc--tG
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003028.1                                  18363282 33 - 116941312 -------a-------a-----aagaaa-------------a-------tac-----ta-----ttca-gacacaa-cttggc--tG
i Bos_indicus.CM003028.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1126138 33 -   1948126 -------a-------a-----aagaaa-------------a-------tac-----ta-----ctca-gacacaa-cttggc--tG
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000184.6                                   18200256 33 - 114055384 -------a-------a-----aagaaa-------------a-------tac-----ta-----ttca-gacacaa-cttggc--tG
i Bos_taurus.CM000184.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2819888 33 +   4408762 -------a-------a-----aagaaa-------------a-------tac-----ta-----ctcA-GAAACAA-CTTGGC--TG
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Callibella_humilis.k141_1278103                             6634 29 -     10423 G-----GA-------A----------A-------------A-------AAG-----TG-----CTCA-AAAA-AC-GTTGGC--CA
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_737284                                180 28 -     31217 ------aa-------a----------a-------------a-------aaa-----aa-----aaaa-aaaC-AC-GTTGGC--CA
i Callimico_goeldii.k141_737284                          N 0 C 0
s Callithrix_geoffroyi.k119_69176                              473 29 +      5377 G-----GA-------A----------A-------------A-------AAG-----TG-----TTCA-AAAA-AC-GTTGGC--CA
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592334 29 - 189096842 G-----GA-------A----------A-------------A-------AAG-----TG-----TTCA-AAAA-AC-GTTGGC--CA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1148 29 -     12329 G-----GA-------A----------A-------------A-------AAG-----TG-----TTCA-AAAA-AC-GTTGGC--CA
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10003157 29 -  17673402 -------a-------a---------aa-------------a-------tac-----ta-----ctca-GAAACAA-CCTGGC--TG
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2335633 29 -   7040546 -------a-------a---------aa-------------a-------tac-----ta-----ctca-GAAACAA-CCTGGC--TG
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  403932 29 -   1652518 -------a-------a---------aa-------------a-------tac-----ta-----ctca-GAAACAA-CCTGGC--TG
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17800072 29 -  60362399 ------------------------------------------------AAACAAGGGC-----CTCA-GAAACTA-TTTGGC--TG
i CanFam4.chr16                                          I 1 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                      820 29 -     43241 ------------------------------------------------AAACAAGGGC-----CTCA-GAAACTA-TTTGGC--TG
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 1 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9035515 29 -   9314153 ------------------------------------------------AAACAAGGGC-----CTCA-GAAACTA-TTTGGC--TG
i Canis_lupus_dingo.QKWQ01000480.1                       I 1 C 0
s Canis_lupus_familiaris.chr16                            17959991 29 -  59632846 ------------------------------------------------AAACAAGGGC-----CTCA-GAAACTA-TTTGGC--TG
i Canis_lupus_familiaris.chr16                           I 1 C 0
s Canis_lupus_orion.HG994398.1                            18501288 29 +  63665305 ------------------------------------------------AAACAAGGGC-----CTCA-GAAACTA-TTTGGC--TG
i Canis_lupus_orion.HG994398.1                           I 1 C 0
s Capra_aegagrus.CM003241.1                               18830516 33 +  46296322 -------a-------a-----aagaaa-------------a-------tac-----tc-----ctCA-GAAACAA-CTTGGC--TG
i Capra_aegagrus.CM003241.1                              I 8 C 0
s Capra_hircus.CM004588.1                                 18061236 33 -  44709034 -------a-------a-----aagaaa-------------a-------tac-----tc-----ctCA-GAAACAA-CTTGGC--TG
i Capra_hircus.CM004588.1                                I 8 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1907  7 -     12242 --------------------------C-------------C-------AG------TG-----C----------------------
i Capromys_pilorides.CapPil_scaffold_65020               I 4 I 22
s Carollia_perspicillata.CarPer_scaffold_92756                6025 20 -     11696 --------------------------------------------------------TA-----CTTA-TA-ACCT-CTCTAC--TG
i Carollia_perspicillata.CarPer_scaffold_92756           I 3 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138202 25 +    179628 --------------------------A-------------A-------AG------TA-----CTCA-GAAATAT-GTTGGT--TG
i Castor_canadensis.CasCan_scaffold_2074                 I 5 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     94451 29 +    217609 -------A-------AA---------A-------------A-------TAC-----TA-----CTCA-GAGAAAA-CTTGTC--TG
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                         11074 29 -     11392 G-----GA-------A----------A-------------A-------AAG-----TG-----CTCA-AAAA-AC-ATTGGC--CA
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               7258 29 -      7577 G-----GA-------A----------A-------------A-------AAG-----TG-----CTCA-AAAA-AC-GTTGGC--CA
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25653679 29 +  26074798 G-----GA-------A----------A-------------A-------AAG-----TG-----CTGA-AAAA-AT-GTTGGC--CA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                1617 29 +     28840 G-----GA-------A----------A-------------A-------AAG-----TG-----CTGA-AAAA-AT-GTTGGC--CA
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 1346 29 +     14051 G-----GA-------A----------A-------------A-------AAG-----TG-----CTGA-AAAA-TT-GTTGGC--CA
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Ceratotherium_simum.JH767749.1                          12232371 30 +  27778364 -------a-------a--------aaa-------------a-------aag-----gg-----ctca-GAAACAA-CTTGGC--TG
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3398 30 -     25243 -------A-------AAA--------A-------------A-------AAG-----GG-----CTCA-GAAACAA-CTTGGC--TG
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4476600 29 +   4669795 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-ATTGGC--TG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        1102 29 +     17872 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-ATTGGC--TG
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           1759 29 -     14043 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGGC--TG
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9792 29 +     27781 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-ATTGGC--TG
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         9960 29 -     20310 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTG--ACTG
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          12940 29 +     29689 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTG--GCTG
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7686 29 -     20078 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTG--GCTG
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          15608 29 -     27936 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTG--GCTG
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            4474 29 -     17152 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTG--GCTG
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38818019 29 +  39242232 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTG--ACTG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223708 29 -  21565898 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTG--GCTG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40827 29 -     53127 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTG--GCTG
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        1078 29 +     13442 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTG--ACTG
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15627 29 -     27947 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTG--GCTG
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         15603 29 +     17596 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTG--GCTG
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          1646 29 +     14005 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTG--GCTG
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1398 13 -      8501 ------------------------------------------------AAG-----TG-----CCCA-GAAA--------------
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       I 5 I 7
s Cheirogaleus_major.k141_333249                             21984 26 -     52598 --------------------------A-------------A-------AAG-----CA-----CTCA-GAACCAA-GTTGGC--TG
i Cheirogaleus_major.k141_333249                         I 2 I 2
s Cheirogaleus_medius.k141_1055463                           17355 26 +     57038 --------------------------A-------------A-------AAG-----CA-----CTCA-GAACCAA-GTTGGC--TG
i Cheirogaleus_medius.k141_1055463                       I 2 I 2
s Chinchilla_lanigera.JH722012.1                           1253782  7 +   2543920 --------------------------A-------------A-------AG------TG-----C----------------------
i Chinchilla_lanigera.JH722012.1                         I 4 I 22
s Chiropotes_albinasus.k141_2206961                           1962 29 -     15524 G-----GA-------A----------A-------------A-------AGG-----TG-----CTCA-AAAA-AC-GTTGGC--CA
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18429587 27 -  18827391 G-----GA-------A----------A-------------A-------ATG-----TG-----CTCT-GAAA-AA-GTTG----TG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       16023 27 -     50209 G-----GA-------A----------A-------------A-------ATG-----TG-----CTCT-GAAA-AA-GTTG----TG
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135423024 27 + 135778131 G-----GA-------A----------A-------------A-------ATG-----TG-----CTCT-GAAA-AA-GTTG----TG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 19212 20 +     19366 g-----at-------a---------aa-------------a-------aag-----tg-----ctca-gaaa--------------
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 I 7
s Choloepus_hoffmanni.KN194906.1                            174286 20 +    839153 G-----AT-------AA---------A-------------A-------AAG-----TG-----CTCA-GAAA--------------
i Choloepus_hoffmanni.KN194906.1                         C 0 I 7
s Colobus_angolensis.KN981557.1                            1911500 29 +   2368649 A-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGGC--TG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949752 29 + 200372422 A-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGGC--TG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              38034 29 +     84244 A-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGGC--TG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17548966 22 -  53390261 ------------------------------------------------t-------ta-----ttca-gaaacaA-CTTGGC--TG
i Condylura_cristata.JH655891.1                          I 4 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1379 25 +     23735 --------------------------T-------------A-------AAG-----TA-----TTCA-AAAGCAA-T-TGGA--TG
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 50926 24 +     63868 --------------------------G-------------A--------G------TA-----CTCA-GAAACAA-GTTGGT--GG
i Cricetomys_gambianus.CriGam_scaffold_18520             I 1 C 0
s Cricetulus_griseus.LT883664.1                           11668439 24 + 224834208 --------------------------G-------------A--------A------TG-----CTCA-GAAATAA-GTCAGT--CG
i Cricetulus_griseus.LT883664.1                          I 1 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               3861 21 -     19598 --------------------------------------------------G-----T------TTCT-GAAACAA-CTTGGC--TG
i Crocidura_indochinensis.CroInd_scaffold_37019          I 4 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29400 22 -     87169 ------------------------------------------------C-------GA-----CTCA-GAAACAA-CTTGGC--TG
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 7 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837981 18 +   1526836 ----------------------------------------------------------------CAA-GAAGCAA-AGTGGT--TG
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 7 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  36776  7 +     51376 --------------------------C-------------C-------AG------TG-----T----------------------
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 4 I 28
s Dasypus_novemcinctus.JH564415.1                            64415 13 +   2246927 ------------------------------------------------AAG-----TG-----CTCA-GAAA--------------
i Dasypus_novemcinctus.JH564415.1                        I 5 I 7
s Daubentonia_madagascariensis.ctg71                      12538183 30 -  12879189 G-----GA-------A----------A-------------A-------AAG-----TA-----CTCG-GAAACAA-GTTCGC--TG
i Daubentonia_madagascariensis.ctg71                     C 0 I 2
s Delphinapterus_leucas.KZ290073.1                        16812263 36 +  35494412 -------a-------a---------aatatatat------a-------tac-----tg-----ctcA-GATACAA-CTTGGC--TG
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8631021 20 +  20541912 --------------------------------------------------------TA-----CTCA-TA-ACCT-CTTTCT--TA
i Desmodus_rotundus.KZ672289.1                           I 3 I 1
s Dicerorhinus_sumatrensis.PEKH010002091.1                  674220 29 +   1390856 -------a-------a---------aa-------------a-------aag-----tg-----ctca-gAAACAA-CTTGGC--TG
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    6971 30 +    198055 -------A-------AAA--------A-------------A-------AGG-----GG-----CTCA-GAAACAA-CTTGGC--TG
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37261  7 +     67921 --------------------------A-------------A-------AG------TG-----T----------------------
i Dinomys_branickii.DinBra_scaffold_21862                I 4 I 22
s Echinops_telfairi.JH980293.1                            48781666 30 + 111700974 G-----G-A----A-A-------G--A-------------A-------AAG-----TG-----CTCA-GAA--AA-GTTGAA--TG
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.KE759718.1                                  11447 29 +     11740 -------a-------a---------at-------------a-------aag-----aa-----ttca-aaaaaaa-tttgGC--TG
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       311553 33 +    607251 -------a-------a-----aaaaaa-------------a-------tac-----ta-----ctca-GAAACAA-CTTGGC--TG
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1098623 38 +  10337057 G-----GAAGGGTAAC--T-------G-------------A-------AAA-----TG-----CTTA-GAAATAA-ATTAGG--TA
i Elephantulus_edwardii.JH947257.1                       I 1 C 0
s Ellobius_lutescens.LOEQ01008920.1                          21409 24 -    110024 --------------------------G-------------A--------A------TG-----CTCA-GAAACAA-GTTGGT--TA
i Ellobius_lutescens.LOEQ01008920.1                      I 1 C 0
s Ellobius_talpinus.LOJH01081419.1                            1315 24 +      8657 --------------------------G-------------A--------A------TG-----CTCA-GAAACAA-GTTGGT--TA
i Ellobius_talpinus.LOJH01081419.1                       I 1 C 0
s Enhydra_lutris.KZ291758.1                               16330211 44 -  41312741 ---------------a-----caacaa-------------caataataaaccAGGGGA-----CTCA-GAAACAA-CTTGGC--TT
i Enhydra_lutris.KZ291758.1                              I 6 I 13
s Eptesicus_fuscus.JH977646.1                              2146635 25 -  14770903 ----------------------------------------A-------AGG-----TA-----CTAA-CAAACAA-CTTGGC--TG
i Eptesicus_fuscus.JH977646.1                            I 1 C 0
s Equus_asinus.JREZ01000139.1                              1284481 25 +   4378816 --------------------------A-------------G-------AAG-----TA-----CTCG-G-AACAA-CTTGGC--TC
i Equus_asinus.JREZ01000139.1                            I 2 C 0
s Equus_caballus.CM000403.2                               18532301 25 -  39960074 --------------------------G-------------G-------AAG-----TA-----CTCG-G-AACAA-CTTGGC--TC
i Equus_caballus.CM000403.2                              I 2 C 0
s Equus_przewalskii.KK951119.1                               34330 25 +    498745 --------------------------G-------------G-------AAG-----TA-----CTCG-G-AACAA-CTTGGC--TC
i Equus_przewalskii.KK951119.1                           I 2 C 0
s Erinaceus_europaeus.JH835339.1                           3329162 30 -   7059049 -------TA------AA---------G-------------C-------AAG-----TA-----CCTA-TAAACAA-CTTGGC--TG
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21206192 27 -  21539334 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCT-GAAA-AA-GTTG----TG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11939 34 +    133382 -------A-------AA---------A--------AAAATA-------TAC-----TA-----CTCA-GATACAA-CTTGGC--TG
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             25876 34 -     44125 -------A-------AA---------A--------TATATA-------TAC-----TA-----CTCA-GATACAA-CTTGGC--TG
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Eulemur_albifrons.k141_576796                              41030 29 -     44621 G-----GA-------A----------A-------------A--------AG-----CA-----CTCA-GAACCAA-GTTGGC--TG
i Eulemur_albifrons.k141_576796                          I 1 I 2
s Eulemur_collaris.k141_377015                                7411 29 -     16928 G-----GA-------A----------A-------------A--------AG-----CA-----CTCA-GAACCAA-GTTGGC--TG
i Eulemur_collaris.k141_377015                           I 1 I 2
s Eulemur_coronatus.k141_885031                              16443 29 -     25546 G-----GA-------A----------A-------------A--------AG-----CA-----CTCA-GAACCAA-GTTGGC--TG
i Eulemur_coronatus.k141_885031                          I 1 I 2
s Eulemur_flavifrons.k141_1184614                            13639 29 +     26330 G-----GA-------A----------A-------------A--------AG-----CA-----CTCA-GAACCAA-GTTGGC--TA
i Eulemur_flavifrons.k141_1184614                        I 1 I 2
s Eulemur_fulvus.k141_544389                                 14874 29 +     23973 G-----GA-------A----------A-------------A--------AG-----CA-----CTCA-GAACCAA-GTTGGC--TG
i Eulemur_fulvus.k141_544389                             I 1 I 2
s Eulemur_macaco.k141_1562045                                13636 29 +     75513 G-----GA-------A----------A-------------A--------AG-----CT-----CTCA-GAACCAA-GTTGGC--TA
i Eulemur_macaco.k141_1562045                            I 1 I 2
s Eulemur_mongoz.k141_232305                                 11566 29 +     97555 G-----GA-------A----------A-------------A--------AG-----CA-----CTCA-GAACCAA-GTTGGC--TG
i Eulemur_mongoz.k141_232305                             I 1 I 2
s Eulemur_rubriventer.k141_774594                             1058 29 +     13026 G-----GA-------A----------A-------------A--------AG-----CG-----CTCA-GAACCAA-GTTGGC--TG
i Eulemur_rubriventer.k141_774594                        I 1 I 2
s Eulemur_rufus.k141_1476633                                  5110 29 -     17153 G-----GA-------A----------A-------------A--------AG-----CA-----CTCA-GAACCAA-GTTGGC--TG
i Eulemur_rufus.k141_1476633                             I 1 I 2
s Eulemur_sanfordi.k141_1122526                              14683 29 +    111500 G-----GA-------A----------A-------------A--------AG-----CA-----CTCA-GAACCAA-GTTGGC--TG
i Eulemur_sanfordi.k141_1122526                          I 1 I 2
s Felis_catus.CM001381.2                                  20237857 25 + 206538554 ----------------------------------------c-------aaa-----aa-----ctca-gaaacAG-CATGGC--TG
i Felis_catus.CM001381.2                                 I 6 C 0
s Felis_catus_fca126.CM031415.1                           20196700 25 + 205367284 ----------------------------------------c-------aaa-----aa-----ctca-gaaacAG-CATGGC--TG
i Felis_catus_fca126.CM031415.1                          I 6 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 10447 32 -     36744 -------AA----AAAA---------A-------------C-------AAA-----AA-----CTCA-GAAACAG-CATGGC--TG
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             851313  7 +   3816255 --------------------------A-------------A-------AG------TG-----C----------------------
i Fukomys_damarensis.KN121974.1                          I 4 I 22
s Galago_moholi.ctg2040                                     427496 30 -    453645 G-----AA-------A----------G-------------A-------AAG-----CC-----CTCA-GAAACAA-GTTGGC--TG
i Galago_moholi.ctg2040                                  C 0 I 2
s Galago_senegalensis.k141_631886                             5186 30 +     11339 G-----AA-------A----------G-------------A-------AAG-----CC-----CTCA-GAAACAA-GTTGGC--TG
i Galago_senegalensis.k141_631886                        C 0 I 2
s Galagoides_demidoff.k141_1711393                            2484 30 +     41679 G-----AA-------A----------G-------------A-------AAG-----TC-----CTCA-GAAACAA-GTTGGC--TG
i Galagoides_demidoff.k141_1711393                       C 0 I 2
s Galeopterus_variegatus.GalVar_scaffold_108840               2095 30 -      9135 G-----GA-------A----------A-------------A-------AAG-----TG-----CTCA-GAAACTA-GTTGGC--TG
i Galeopterus_variegatus.GalVar_scaffold_108840          I 8 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     609518 32 -    660261 -------a-------a------aaaat-------------a-------tgc-----tA-----CACA-GAAACAA-CTTGGC--TG
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Gorilla_beringei.k141_3596273                              16991 30 -     32273 G-----GA-------A----------A-------------G-------ATA-----TG-----CTCAGAAAA-AA-GTTGGC--TG
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186339127 30 + 186649187 G-----GA-------A----------A-------------G-------ATA-----TG-----CTCAGAAAA-AA-GTTGGC--TG
i Gorilla_gorilla.LT578341.1                             I 29 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33521 21 +     78134 --------------------------A-------------A-------AA------TG-----CTCA-GAAATAA-----GT--TG
i Graphiurus_murinus.GraMur_scaffold_10447               I 4 C 0
s Hapalemur_alaotrensis.k141_170648                           7738 29 -     19426 G-----GA-------A----------A-------------A--------AG-----CG-----CTCA-GAACCAA-GTTGGC--TG
i Hapalemur_alaotrensis.k141_170648                      I 1 I 2
s Hapalemur_gilberti.k141_488810                             12891 29 -     15286 G-----GA-------A----------A-------------A--------AG-----CG-----CTCA-GAACCAA-GTTGGC--TG
i Hapalemur_gilberti.k141_488810                         I 1 I 2
s Hapalemur_griseus.k141_1511508                             14530 29 +     18253 G-----GA-------A----------A-------------A--------AG-----CG-----CTCA-GAACCAA-GTTGGC--TG
i Hapalemur_griseus.k141_1511508                         I 1 I 2
s Hapalemur_meridionalis.k141_248335                         14631 29 -     41752 G-----GA-------A----------A-------------A--------AG-----TG-----CTCA-GAACCAA-GTTGGC--TG
i Hapalemur_meridionalis.k141_248335                     I 1 I 2
s Hapalemur_occidentalis.k141_907772                         14468 29 -     16460 G-----GA-------A----------A-------------A--------AG-----CG-----CTCA-GAACCAA-GTTGGC--TG
i Hapalemur_occidentalis.k141_907772                     I 1 I 2
s Helogale_parvula.HelPar_flattened_line_2585               243232 29 +    327341 -------AA----A-AA---------A-------------C-------C-------GA-----CTCA-GAAACAA-CGTGGC--TG
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18721 33 +     36099 -------A-------AAAGA-A----A-------------A-------TAC-----TC-----CTCA-GAAACAA-CTTGGC--TG
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 7 C 0
s Heterocephalus_glaber.JH602082.1                        20663069  7 +  22651954 --------------------------a-------------a-------aa------tg-----c----------------------
i Heterocephalus_glaber.JH602082.1                       I 4 I 22
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1803 28 +      7595 G-----GA-------AA---------A-------------A-------TAC-----TT-----TTCA-GAACAAA-GC-GGC----
i Heterohyrax_brucei.HetBruBak_scaffold_122365           I 2 C 0
s Hipposideros_armiger.JXIK01000431.1                       111407 29 +   1711038 -------a-------a---------ga-------------g-------agc-----aa-----ttCA-GAAACAA-CTTAGC--TG
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               42837 29 +     43066 -------A-------A-------G--A-------------A-------AGC-----TA-----TTCA-GAAACAA-CTTTGC--TG
i Hipposideros_galeritus.HipGal_scaffold_29171           I 14 C 0
s Hoolock_leuconedys.ctg274                                    435792 30 +    630532 G-----GA-------A----------A-------------G-------ATA-----TG-----CTCAGAAAA-AA-GTTGGC--TG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45937 30 +     55795 -------AA----AAAA---------A-------------C-------T-------GA-----CTCA-GAAACAA-CTTGTC--TG
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83963 25 +    135385 --------------------------A-------------A-------AA------TG-----CTTA-GAAACAA-GGTGGT--TA
i Hystrix_cristata.HysCri_scaffold_5660                  I 2 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7521800 26 -   7955117 --------------------------G------------CA-------AG------TG-----CTCA-GAAACAAAT-TGGT--TG
i Ictidomys_tridecemlineatus.JH393364.1                  I 4 C 0
s Indri_indri.k141_3655594                                   23424 30 +     31101 G-----GA-------A----------T-------------A-------AAG-----TG-----CTCA-GAACCAA-GCTGGC--TA
i Indri_indri.k141_3655594                               C 0 I 2
s Inia_geoffrensis.IniGeo_flattened_line_48101               23480 34 +     23964 -------A-------AA---------A--------TATATA-------TAC-----TA-----CTCA-GATACAA-CTTGGC--TG
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8278050 25 -   9596543 --------------------------G-------------A-------AG------TT-----CTCA-GAAACAA-GTTGGC--TG
i Jaculus_jaculus.JH725527.1                             I 1 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                2837 34 -      3359 -------A-------AA---------A--------TATATA-------TAC-----TA-----CTCA-GATACAA-TTTGGC--TG
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    17284 34 -     42476 ---------------A-------G--A------------AA-------AGG-----TACCCTACTCA-CAAACAA-CTTGGC--AA
i Lasiurus_borealis.LasBor_scaffold_32767                I 38 C 0
s Lemur_catta.scaffold_24                                 15524983 29 -  30322482 G-----GA-------A----------A-------------A--------AG-----CA-----CTCA-GAACCAA-GTTGGC--TG
i Lemur_catta.scaffold_24                                I 1 I 2
s Leontocebus_fuscicollis.k141_1820339                        8913 29 +     64341 G-----GA-------A----------A-------------A-------AAG-----TG-----GTCA-AAAA-CC-GTTGGC--TA
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           1253 29 -     35062 G-----GA-------A----------A-------------A-------AAG-----TG-----GTCA-AAAA-CC-GTTGGC--CA
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        8940 29 +     35603 G-----GA-------A----------A-------------A-------AAG-----TG-----GTCA-AAAA-CC-GTTGGC--CA
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    30553 29 +     38576 G-----GA-------A----------A-------------A-------AAG-----TG-----CTCA-AAAA-AC-GTTGGC--CA
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         27257 29 +     66356 G-----GA-------A----------A-------------A-------AAG-----TG-----CTCA-AAAA-AC-GTTGGC--CA
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         11873 29 -     23766 G-----G--------A----------A-------------A-------AAG-----TA-----CTCA-GAACCAA-GCTGGC--TG
i Lepilemur_ankaranensis.k141_596936                     C 0 I 2
s Lepilemur_dorsalis.k141_577674                             29927 29 +     45836 G-----G--------A----------A-------------A-------AAG-----TG-----CTCA-GAACCAA-GCTGGC--TG
i Lepilemur_dorsalis.k141_577674                         C 0 I 2
s Lepilemur_ruficaudatus.k141_121139                          2472 29 +     25010 G-----G--------A----------A-------------A-------AAG-----TA-----CTCA-GAACCAA-GCTGGC--TG
i Lepilemur_ruficaudatus.k141_121139                     C 0 I 2
s Lepilemur_septentrionalis.k141_185316                      27867 29 +     54090 G-----G--------A----------A-------------A-------AAG-----TG-----CTCA-GAACCAA-GCTGGC--TG
i Lepilemur_septentrionalis.k141_185316                  C 0 I 2
s Leptonychotes_weddellii.KB714746.1                       3043960 36 +   3914936 --------------------------a-------------caacaa--aaacaggggA-----CTCC-AAAACAA-CTTGGC--TG
i Leptonychotes_weddellii.KB714746.1                     I 3 C 0
s Lepus_americanus.LepAme_scaffold_107385                     7356 29 -     14121 A-----GG-------A----------A-------------A-------CA------TA-----CTCA-GAAACAA-GTGGGC--TG
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             268531 34 -    662738 -------a-------a---------aatatat--------a-------tac-----ta-----ctcA-GATCCAA-CTTGGC--TG
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1438143 29 +   1826925 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGGC--TG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            6736 30 +     11245 G-----AA-------A----------G-------------A-------AAG-----TC-----CTCA-GAAACAA-GTTGGC--TG
i Loris_lydekkerianus.k141_2539221                       C 0 I 2
s Loris_tardigradus.ctg83                                  1005557 30 +   6120653 G-----AA-------A----------G-------------A-------AAG-----TC-----CTCA-GAAACAA-GTTGGC--TG
i Loris_tardigradus.ctg83                                C 0 I 2
s Loxodonta_africana.GL010049.1                            4218262 31 -  43346337 G-----GG-------A-------G--A-------------A-------AAG-----TG-----CTCA-GAAACAA-GCTGGC--TG
i Loxodonta_africana.GL010049.1                          I 2 C 0
s Lycaon_pictus.CM007581.1                                17956231 29 -  59628241 ------------------------------------------------AAACAAGGGC-----CTCA-GAAACTA-TTTGGC--TG
i Lycaon_pictus.CM007581.1                               I 1 C 0
s Macaca_arctoides.k141_2326796                               7958 29 +     40492 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGAC--TG
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59677217 29 +  60120075 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGAC--TG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13733 29 -     26193 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGAC--TG
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            81517 29 -    114318 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGAC--TG
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  7204 29 -     23192 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGAC--TG
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16677 29 -     29190 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGAC--TG
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  25242 29 +     37952 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGAC--TG
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186840331 29 + 187317192 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGAC--TG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458894 29 -  25927173 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGAC--TG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  81090 29 +     89720 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGAC--TG
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 8091 29 +     20474 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGAC--TG
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   7891 29 -     14993 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGAC--TG
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  330757 29 -    668171 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGAC--TG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 6204 29 -     24072 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGAC--TG
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26829 29 -     45290 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGAC--TG
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91541 29 +     94391 -------A-------CA---------T-------------A-------AAG-----TA-----TTCA-GAAAAAA-TTTGGC--TG
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23938420 29 -  24302211 G-----GA-------A----------A-------------A-------ATA-----CG-----CTCA-GAAA-AA-GTTGGC--TG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352542 29 +    752769 G-----GA-------A----------A-------------A-------ATA-----CG-----CTCA-GAAA-AA-GTTGGC--TG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              19156 31 +    737560 -------a-----taa---------aa-------------a-------aag-----ta-----cttA-GAAACAA-CTTGGC--TG
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              51142 31 -    317179 -------a-----taa---------aa-------------a-------aag-----ta-----cttA-GAAACAA-CTTGGC--TG
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33103995 26 -  40650429 --------------------------G------------CA-------AG------TG-----CTCA-GAAACAAGT-TGGT--TG
i Marmota_marmota.CZRN01000018.1                         I 4 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        14260 24 -    207569 ------------------------------------------------AAG-----TG-----TTCA-GAAACCA-CTCAAA--TG
i Megaderma_lyra.MegLyr_scaffold_4542                    I 3 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             10951 44 +     13704 ---------------ACA-ACA----A-------------CAACAACAAACCAGGGGA-----CTCA-GAAACAA-CTTGGC--TT
i Mellivora_capensis.MelCap_flattened_line_69365         I 6 I 13
s Meriones_unguiculatus.MerUng_scaffold_7390                 33637 24 +    140813 --------------------------G-------------A--------G------TG-----CTCA-GAAACAA-GTTGAA--TG
i Meriones_unguiculatus.MerUng_scaffold_7390             I 1 C 0
s Mesocricetus_auratus.KB708134.1                         12183101 24 -  29670104 --------------------------g-------------a--------a------tg-----cTCA-CAAGCAA-GTCAGT--TG
i Mesocricetus_auratus.KB708134.1                        I 1 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    4148 34 +     10310 -------A-------AA---------A--------TATATA-------TAC-----TA-----CTCA-GATACAA-CTTGGC--TG
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Mico_argentatus.k141_1239457                                7070 29 -      7380 G-----GA-------A----------A-------------A-------AGG-----TG-----CTCA-AAAA-AC-GTTGGC--CA
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_schneideri.k141_1950671                                      7043 29 -      7356 G-----GA-------A----------A-------------A-------AGG-----TG-----CTCA-AAAA-AC-GTTGGC--CA
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18292428 26 -  93316391 --------------------------A-------------G-------AAG-----CA-----CTCA-GATCCAA-GTTGTC--TG
i Microcebus_murinus.CM007674.1                          I 2 I 2
s Microgale_talazaci.MicTal_scaffold_6613                    23571 32 -    145209 G-----G-A----A-A-------G--A-------------A-------AAG-----TG-----CTCA-GAAACAA-TTTGAA--TA
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                16562 20 -     19307 --------------------------------------------------------TA-----CTCA-GA-ACCT-CTTTGC--TG
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 3 C 0
s Microtus_ochrogaster.CM001695.1                         11261394 24 -  27267610 --------------------------g-------------a--------a------tg-----ttcA-GAAACAA-GTTGGT--TT
i Microtus_ochrogaster.CM001695.1                        I 1 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1851511 28 +   8254450 ---------------A-------G--A------------AA-------AAG-----CA-----C-CA-TAAACAA-CTTGGC--TG
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             35191 28 +     64694 ---------------A-------G--A------------AA-------AAG-----CA-----C-CA-TAAACAA-CTTGGC--TG
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                          10126 27 -     28506 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCT-GAAA-AA-GTTG----TG
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6822 41 -      8324 -------A----CA-AA---------A-------------C--AACAAAAACAGGGGA-----CTCC-AAAACAA-CTTGGC--TG
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                      9972 26 -     37649 --------------------------G-------------G-------AAG-----CA-----CTCA-GATCCAA-GTTGGC--TG
i Mirza_zaza.k141_952172                                 I 2 I 2
s Monodon_monoceros.MonMon_M_scaffold_103                    27652 36 -    437263 -------A-------AA---------A------TATATATA-------TAC-----TG-----CTCA-GATACAA-CTTGGC--TG
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142563 20 -    366855 --------------------------------------------------------CA-----CTCA-TA-ACAT-CTTTGC--TG
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 3 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   1598 33 +     82753 -------A-------AAAGA-A----A-------------A-------TAC-----TA-----CTCA-GAACCAA-CTTCGC--TG
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   36332 30 +     37127 -------AA----AAAA---------A-------------C-------C-------AG-----CTTA-GAAACAA-TGTGGC--TG
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           7737 29 +     14753 ---------------AA---------A------------AA-------AGG-----TA-----CTCA-CAAACAA-CTTGGC--TG
i Murina_feae.MurFea_scaffold_85699                      I 1 C 0
s Mus_caroli.LT608237.1                                   84362253 24 - 120012414 --------------------------G-------------A--------T------AG-----CTCA-GAAACAA-GTTGGC--TG
i Mus_caroli.LT608237.1                                  I 1 C 0
s Mus_musculus.chr8                                       87651246 24 - 129401213 --------------------------g-------------a--------g------ag-----ctca-gaaacaa-GTTGGC--TG
i Mus_musculus.chr8                                      I 1 C 0
s Mus_pahari.LT608297.1                                   31355900 24 -  89631738 --------------------------G-------------A--------G------AG-----TTCA-GAAACAA-GTTGGT--TG
i Mus_pahari.LT608297.1                                  I 1 C 0
s Mus_spretus.CM004101.1                                  90753309 24 - 130317789 --------------------------G-------------A--------G------AG-----CTCA-GAAACGA-GTTGGC--TG
i Mus_spretus.CM004101.1                                 I 1 C 0
s Mustela_putorius.JH418006.1                               302362 44 -  14710649 ---------------a-----caacaa-------------caacaacaaaccagggGA-----TTCA-GAAACAA-CTTGGC--TT
i Mustela_putorius.JH418006.1                            I 6 I 13
s Myocastor_coypus.MyoCoy_scaffold_10123                     72095  7 -     80779 --------------------------T-------------C-------AG------TG-----C----------------------
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 4 I 22
s Myotis_brandtii.KE162005.1                                281376 29 -  10118263 ---------------a---------aa------------ga-------agg-----TA-----CTCA-CAAACAA-CTTGGT--TG
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1588632 28 -   6019432 ---------------a----------a-a-----------a-------agg-----ta-----ctcA-CAAACAA-CCTGGT--TG
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3904728 29 -   4330536 ---------------a---------aa------------ga-------agg-----TA-----CTCA-CAAACAA-CTTGGT--TG
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_353577                         330 31 -      1254 ---------------AAA-A------A------------AA-------AGG-----TA-----CTCA-CAAACAA-CTTGGT--TG
i Myotis_myotis.MyoMyo_scaffold_353577                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190157 17 +    196477 ---------------AA---------A-------------A-------AAG-----GA-----CTCA-GAAA--------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 3 I 7
s Nannospalax_galili.KL204047.1                            2034937 24 -   3037898 --------------------------A-------------A--------G------TG-----CTCA-GGAACAA-gttggt--tt
i Nannospalax_galili.KL204047.1                          I 2 C 0
s Nasalis_larvatus.k141_413338                               16128 29 +     21681 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGGC--TG
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308411 45 +  31847680 -------a-----caa-----ccacaa-------------caacaa--aaacaggggA-----CTCC-AAAACAA-CTTGGC--TG
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5866609 36 +   7148211 -------a-------a---------aatatatat------a-------tac-----ta-----ctca-GATACAA-CTTGGC--TG
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    758787 14 +    783361 --------------------------------------------------------------------T-GACAA-CTTTGC--TG
i Noctilio_leporinus.NocLep_scaffold_251                 I 7 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150293 29 -   9404916 ------------------------------------------------AAACAAGGGC-----CTCA-GAAACTA-TTTGGC--TG
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 1 C 0
s Nycticebus_bengalensis.LG01                            102587102 30 - 196305487 G-----AA-------A----------G-------------A-------AAG-----TC-----CTCA-GAAACAA-GTTGGC--TG
i Nycticebus_bengalensis.LG01                            C 0 I 2
s Nycticebus_coucang.k141_1127096                             1026 30 +      2075 G-----AA-------A----------G-------------A-------AAG-----TC-----CTCA-GAAACAA-GTTGGC--TG
i Nycticebus_coucang.k141_1127096                        C 0 I 2
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105762457 30 + 199412804 G-----AA-------A----------G-------------A-------AAG-----TC-----CTCA-GAAACAA-GTTGGC--TG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 2
s Ochotona_princeps.JH802162.1                             1364719 21 +   3988456 --------------------------------------------------------TG-----CTCA-GAAACAA-ATTAGC--TG
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              507553 48 -   2017862 -------a-----caa--caacaacaa-------------caacaa--aaacaggggA-----CTCC-AAAACAA-CTTGGC--TG
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          77438 25 -    150152 ----------------------------------------a-------tgc-----ta-----cacA-GAAACAA-CTTGGC--TG
i Okapia_johnstoni.LVCL01S0005463.1                      I 6 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   26043 24 +     28053 --------------------------G-------------A--------A------TG-----CTGA-GAAACAA-GTTGGT--TT
i Ondatra_zibethicus.OndZib_scaffold_46174               I 1 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    81079 24 +    102263 --------------------------G-------------A--------A------TG-----CTCA-GAAACAA-GTTGAT--TG
i Onychomys_torridus.OnyTor_scaffold_2986                I 1 C 0
s Orcinus_orca.KB316932.1                                  2782532 36 -  10937097 -------a-------a---------aatatatat------a-------tac-----ta-----ctca-GATACAA-CTCGGC--TG
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387              11024 36 -     18566 G-----GAA--AAAAAA---------A-------------A-------AAG-----TG-----CTCA-GAAAGAA-GTTGGA--AG
i Orycteropus_afer.OryAfe_flattened_line_144387          I 1 C 0
s Oryctolagus_cuniculus.CM000791.1                        67148215 29 + 174332312 A-----GG-------A----------A-------------T-------AA------TA-----CTCA-GAAACAA-GTGGGC--TG
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       463243 29 -    559221 ------------------------------------------------AAACAAGGGC-----CTCA-GAAACTA-TTTGGC--TG
i Otocyon_megalotis.JAEUCK010005147.1                    I 1 C 0
s Otolemur_crassicaudatus.k141_222918                         5011 30 +      8798 G-----AA-------A----------G-------------A-------AAG-----CC-----CTCA-GAAACAA-GTTGGC--TG
i Otolemur_crassicaudatus.k141_222918                    C 0 I 2
s Otolemur_garnettii.GL873799.1                             697173 30 -   1103335 G-----AA-------A----------G-------------A-------AAG-----CC-----CTCA-GAAACAA-GTTGGC--TG
i Otolemur_garnettii.GL873799.1                          C 0 I 2
s Ovis_aries.CM001607.2                                   17586696 33 +  44047080 -------a-------a-----aagaaa-------------a-------tac-----tc-----ctCA-GAAACAA-CTTAGC--TG
i Ovis_aries.CM001607.2                                  I 7 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      174673 33 -    191736 -------A-------AAAGA-A----A-------------A-------TAC-----TC-----CTCA-GAAACAA-CTTGGC--TG
i Ovis_canadensis.OviCan_scaffold_2572                   I 7 C 0
s Pan_paniscus.KQ411613.1                                    45079 30 +     80009 G-----GA-------A----------A-------------G-------ATA-----TG-----CTCAGAAAA-AA-GTTGGC--CG
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189143977 30 + 189151597 G-----GA-------A----------A-------------G-------ATA-----TG-----CTCAGAAAA-AA-GTTGGC--TG
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152055 31 +    230217 -------AA----A-AA---------A-------------C-------AAA-----AA-----CTCA-GAAACAG-CATGGC--TG
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                265264 31 +  18783137 -------a-----aaa---------aa-------------c-------aaa-----aa-----ctca-gaaacAG-CATGGC--TG
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4722144 31 -   8748460 -------a-----aaa---------aa-------------c-------aaa-----aa-----ctca-gaaacAG-CATGGC--TG
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1265591 33 -   2937107 -------a-------a-----aagaaa-------------a-------tac-----ta-----ctcA-GAAACAA-CTTGGC--TG
i Pantholops_hodgsonii.KE114653.1                        I 8 C 0
s Papio_anubis.CM001495.2                                183444220 29 + 183742232 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGGC--TG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7866 29 +     20448 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGGC--TG
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20564678 29 +  20919399 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGGC--TG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6610 29 +     41871 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGGC--TG
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     9903 29 +     27711 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGGC--TG
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                   900 29 -     11374 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGGC--TG
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13552 29 -     78924 -------AA----A-AA---------A-------------T-------G-------GA-----CTCA-GAAACAA-CTTGGC--TT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           11002 30 +     13100 G-----AA-------A----------G-------------A-------AAG-----TC-----CTCA-GAAACAA-GTTGGC--TG
i Perodicticus_ibeanus.k141_855320                       C 0 I 2
s Perodicticus_potto.k141_1092580                             9396 30 +     25941 G-----AA-------A----------G-------------A-------AAG-----TC-----CTCA-GAAACAA-GTTGGC--TG
i Perodicticus_potto.k141_1092580                        C 0 I 2
s Peromyscus_maniculatus.KI615324.1                       18195659 24 -  18517816 --------------------------G-------------A--------A------TG-----CTCA-GAAACAA-GTTGGT--TG
i Peromyscus_maniculatus.KI615324.1                      I 1 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     28974  7 -     29689 --------------------------A-------------A-------AG------TA-----C----------------------
i Petromus_typicus.PetTyp_scaffold_42190                 I 4 I 22
s Phocoena_phocoena.PhoPho_flattened_line_24159               9571 36 +     63832 -------A-------AA---------A------TATATATA-------TAC-----TA-----CTCA-GATACAA-CTTGGC--TG
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           44619 29 +     62158 A-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGGC--TG
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        39366 29 +     89929 A-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGGC--TG
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40782 29 +     51399 A-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGGC--TG
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14297021 29 -  14605196 A-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGGC--TG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2672 25 +     22620 ----------------------------------------A-------AGA-----TA-----CTCA-CAAACAA-CTTGGC--TG
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 3 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           35277 34 +     35617 -------A-------AA---------A--------AAAATA-------TAC-----TA-----CTCA-GATACAA-CTTGGC--TG
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189132122 30 + 189387572 G-----GA-------A----------A-------------G-------ATA-----TG-----CTCAGAAAA-AA-GTTGGC--TG
i Pongo_abelii.CM009266.2                                C 0 I 24610
s Pongo_pygmaeus.ctg66                                     9571729 30 +   9816681 G-----GA-------A----------A-------------G-------ATA-----TG-----CTCAGAAAA-AA-GTTGGC--TG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               74303 29 -     81375 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGGC--TA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              6124 29 +     19060 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGGC--TA
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 14258 28 -     22811 G-----GA-------AA---------A-------------A-------TAC-----TT-----CTCA-GAACAAA-GC-GAC----
i Procavia_capensis.ProCapCap_scaffold_85530             I 2 C 0
s Prolemur_simus.MPIZ01000396.1                            2597663 29 -   4620579 G-----GA-------A----------A-------------A--------AG-----CG-----CTCA-GAACCAA-GTTGGC--TG
i Prolemur_simus.MPIZ01000396.1                          I 1 I 2
s Propithecus_coquerelli.NW_012148875.1                     991648 26 +   2598838 --------------------------A-------------A-------AAG-----CA-----CTCA-GAACCAA-GCTGGC--TG
i Propithecus_coquerelli.NW_012148875.1                  I 3 I 2
s Propithecus_coronatus.k141_347390                          29960 26 +     38485 --------------------------A-------------A-------AAG-----CA-----CTCA-GAACCAA-GCTGGC--TG
i Propithecus_coronatus.k141_347390                      I 3 I 2
s Propithecus_diadema.k141_58108                              2002 26 -     13098 --------------------------A-------------A-------AAG-----CA-----CTCA-GAACCAA-GCTGGC--TG
i Propithecus_diadema.k141_58108                         I 3 I 2
s Propithecus_edwardsi.k141_1176054                          27481 26 +     35766 --------------------------A-------------A-------AAG-----CA-----CTCA-GAACCAA-GCTGGC--TG
i Propithecus_edwardsi.k141_1176054                      I 3 I 2
s Propithecus_perrieri.k141_1200571                           5668 26 -     24134 --------------------------A-------------A-------AAG-----CA-----CTCA-GAACCAA-GCTGGC--TG
i Propithecus_perrieri.k141_1200571                      I 3 I 2
s Propithecus_tattersalli.k141_790011                        29493 26 -     67325 --------------------------A-------------A-------AAG-----CA-----CTCA-GAACCAA-GCTGGC--TG
i Propithecus_tattersalli.k141_790011                    I 3 I 2
s Propithecus_verreauxi.k141_956661                           5716 26 -      6182 --------------------------A-------------A-------AAG-----CA-----CTCA-GAACCAA-GCTGGC--TG
i Propithecus_verreauxi.k141_956661                      I 3 I 2
s Psammomys_obesus.NESX01036370.1                            11283 24 -     21651 --------------------------G-------------A--------G------TG-----CTCA-GAAACGA-GTTGAA--TG
i Psammomys_obesus.NESX01036370.1                        I 1 C 0
s Pteronotus_parnellii.KE909381.1                            16071 20 -     21811 --------------------------------------------------------ca-----CTCC-TA-ACAT-CTTTGC--TG
i Pteronotus_parnellii.KE909381.1                        I 3 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41146 44 +     42204 ---------------ACA-ACA----A-------------CAATAATAAACCAGGGGA-----CTCA-GAAACAA-CTTGGC--TT
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 6 I 33
s Pteropus_alecto.KB030862.1                              22977690 20 +  28871421 ---------------------------------------------------------a-----ttca-gaaaaaa-tttgGC--TG
i Pteropus_alecto.KB030862.1                             I 4 C 0
s Pteropus_vampyrus.KN534172.1                                7743 20 -      8028 ---------------------------------------------------------a-----ttca-gaaaaaa-tttgGC--TT
i Pteropus_vampyrus.KN534172.1                           I 4 C 0
s Puma_concolor.QAVW01001104.1                            20275216 32 -  38429054 -------a----aaaa---------aa-------------c-------aaa-----aa-----ctca-gaaacAG-CATGGC--TG
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             16110 29 -     91421 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGGC--TG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7610230 29 +   7812017 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGGC--TG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             16109 29 -     72585 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGGC--TG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6174 32 +     55207 ---------------AAA-A-A---AA-------------A-------TAC-----TA-----TTCA-GAAACAA-CTTGGC--TG
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53571499 24 +  90668790 --------------------------A-------------A--------G------TG-----CTCA-GAAACAA-TTTGGC--TG
i Rattus_norvegicus.chr16                                I 1 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        367895 28 -   3329780 -------a-------a---------aa-------------a-------ag------ta-----ttca-ggAACAA-CTTGGC--TG
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             7820 29 -     11128 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGGC--TG
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91237169 29 - 195417433 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGGC--TG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672825 29 +   7961872 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGGC--TG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88723 29 -     96226 -------A-------AA---------T-------------T-------AAG-----TA-----TTCA-GAAAAAA-TTTGAC--TG
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_8081                                  2227 29 +     42994 G-----GA-------A----------A-------------A-------AGG-----TG-----CTCA-AAAA-AC-GTTGGC--CA
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                              922 29 +      2253 G-----GA-------A----------A-------------A-------AAG-----TG-----CTCA-AAAA-AC-GTTGGC--CA
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               1351 29 -      8737 G-----GA-------A----------A-------------A-------AAG-----TG-----CTCA-AAAA-AC-GTTGGC--CA
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                              1004 29 +      2343 G-----GA-------A----------A-------------A-------AAG-----TG-----CTCA-AAAA-AC-GTTGGC--CA
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209475881 29 + 209938924 G-----GA-------A----------A-------------A-------AGG-----TG-----CTCA-AAAA-AC-GTTGGC--CA
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                 327 29 -      7576 G-----GA-------A----------A-------------A-------AAG-----TG-----CTCA-AAAA-AC-GTTGGC--CA
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951950 29 - 121099817 G-----GA-------A----------A-------------A-------AAG-----TG-----CTCA-AAAA-AC-GTTGGC--CA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24292 29 +     46362 G-----GA-------A----------A-------------A-------AAG-----TG-----CTCA-AAAA-AC-GTTGGC--CA
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               24387 29 +     45824 G-----GA-------A----------A-------------A-------AAG-----TG-----CTCA-AAAA-AC-GTTGGC--CA
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             41066 29 -     64574 G-----GA-------A----------A-------------A-------AAG-----TG-----CTCA-AAAA-AC-GTTGGC--CA
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4139 29 -     23631 G-----GA-------A----------A-------------A-------AAG-----TG-----CTCA-AAAA-AC-GTTGGC--CA
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 24283 29 -     61129 G-----GA-------A----------A-------------A-------AAG-----TG-----CTCA-AAAA-AC-GTTGGC--CA
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5421633 29 -   5703754 G-----GA-------A----------A-------------A-------AAG-----TG-----CTGA-AAAA-AT-GCTGGC--CA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          56874 29 -     80660 G-----GA-------A----------A-------------A-------AAG-----TG-----CTGA-AAAA-AT-GCTGGC--CA
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154107 22 -    313613 ------------------------------------------------T-------TA-----TTCA-GAAATAA-CTTGGC--TG
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 4 C 0
s Semnopithecus_entellus.k141_1672505                         1001 29 -     12572 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGGC--TG
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27851 29 +     39453 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGGC--TG
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            8369 29 +     27826 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGGC--TG
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             7891 29 -     19483 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGGC--TG
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      1192 29 -     12762 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGGC--TG
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           1053 29 +     13763 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGGC--TG
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     1192 24 -     30804 --------------------------G-------------A--------A------TG-----CTCA-GAAAACA-ATTGGT--TG
i Sigmodon_hispidus.SigHis_scaffold_42075                I 1 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               4658 29 +   1910179 -------A-------AA---------A-------------A-------TTG-----TA-----CTCA-GACATAG-CCTGGC--TG
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13651907 22 -  18376816 --------------------------------------------------G-----TG-----TTCC-GAAAGAA-CATGGC--TC
i Sorex_araneus.JH798187.1                               I 4 C 0
s Spermophilus_dauricus.KZ294078.1                         1954853 26 -   3870691 --------------------------G------------CA-------AG------TG-----CTCA-GAAACAAGT-TGGT--TG
i Spermophilus_dauricus.KZ294078.1                       I 4 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             31637 47 +     97271 -------G----CA-ACA-AT--G--A-------------CAACAACAAACCAGGGGA-----CTCA-GAAACAA-CTTGGC--TG
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              19234 32 -    196729 -------AA--AAAAAA---------A-------------C-------T-------GA-----CTCA-GAAACAA-CGCGGC--TG
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.JH118708.1                                      37310 29 -     47482 -------a-------a---------aa-------------a-------ttc-----ta-----CTCA-GAAACGA-CTTGTC--TG
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                11722 29 +     41958 ---------------A-------G--A------------AA-------AAG-----TA-----CTCA-TAAACAA-CTTGGC--TG
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73514 25 +    116680 GGAAAAAA-------AA---------A-------------A-------AAG-----GA-----CTCA-GAAA--------------
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 I 7
s Tapirus_indicus.TapInd_scaffold_9301                      119678 29 -    156842 -------G-------AA---------A-------------A-------AAG-----TA-----CTCA-GAAACGA-CTTGGC--TG
i Tapirus_indicus.TapInd_scaffold_9301                   I 2 I 6
s Tapirus_terrestris.TapTer_scaffold_755                    388151 29 +    539355 -------G-------AA---------A-------------A-------AAG-----TA-----CTCA-GAAACGA-CTTGGC--TG
i Tapirus_terrestris.TapTer_scaffold_755                 I 2 C 0
s Theropithecus_gelada.CM009954.1                        186429538 29 + 186847797 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGGC--TG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106278  8 +    114563 --------------------------A------------AA-------AG------TG-----C----------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 4 I 22
s Tolypeutes_matacus.TolMat_scaffold_228639                   7287 13 +      8208 ------------------------------------------------AAG-----TA-----CCCA-GAAA--------------
i Tolypeutes_matacus.TolMat_scaffold_228639              I 5 I 7
s Tonatia_saurophila.TonSau_scaffold_294                     82118 20 +    610378 --------------------------------------------------------TA-----CTCG-CA-ACCT-CTTTGC--TG
i Tonatia_saurophila.TonSau_scaffold_294                 I 3 C 0
s Trachypithecus_auratus.k141_722599                         11942 29 -     20410 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGGC--TG
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      1056 29 -     12674 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGGC--TG
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       12043 29 +     19930 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGGC--TG
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       8454 29 -     19997 G-----GA-------A----------A-------------A-------ATA-----CG-----CTCA-GAAA-AA-GTTGGC--TG
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48593 29 -     60166 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGGC--TG
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        16065 29 -     27529 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGGC--TG
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     16009 29 -     18194 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGGC--TG
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9721 29 -     21137 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGGC--TG
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    8424 29 -     10723 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGGC--TG
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7596 29 +      9834 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGGC--TG
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        25909 29 +     32220 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGGC--TG
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5940011 29 +   6242583 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGGC--TG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        9262 29 +     20839 G-----GA-------A----------A-------------A-------ATA-----TG-----CTCA-GAAA-AA-GTTGGC--TG
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                     526 38 +     27266 -------A-------AAATATATGTAT-------------A-------TAC-----TA-----CTCA-GAAACAG-TTTAAC--TG
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Trichechus_manatus.JH594705.1                            4294166 32 +  10818551 G-----GA-------AA---------A------------GA-------AAG-----TG-----CTCA-GAAACCA-GTTGGC--TG
i Trichechus_manatus.JH594705.1                          I 2 C 0
s Tupaia_chinensis.KB320699.1                              2156690 30 +   4065304 G-----GA-------A----------A-------------A-------CAG-----TT-----CTCA-AAGACAA-GTTGAT--GG
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                    10133 30 -     10553 G-----GA-------A----------A-------------A-------GAG-----TT-----CTCA-AAGACAA-GTTGAA--TT
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15738771 42 +  33153633 -------a-------a---------tatatatatatatata-------tac-----ta-----ctca-GATACAA-CTCGGC--TG
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54197 29 -     77625 -------A-------AA---------A-------------A-------AAT-----TA-----TTCA-GAAATAA-CTCAGC--TG
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4851331 41 -   5085361 -------a-----caa-----caacaa-------------ca------aaccaggaGA-----CTCA-GAAACAA-CTTGGC--TG
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  12322 29 +     50397 G-----GA-------A----------A-------------A--------AG-----CA-----CTCA-GAACCAA-GTTGGC--TG
i Varecia_rubra.k141_590885                              C 0 I 2
s Varecia_variegata.k141_1128296                             12381 29 +     24756 G-----GA-------A----------A-------------A--------AG-----CA-----CTCA-GAACCAA-GTTGGC--TG
i Varecia_variegata.k141_1128296                         C 0 I 2
s Vicugna_pacos.KN270157.1                                 5372683 29 -   5488506 -------a-------a---------aa-------------a-------tac-----ta-----ctca-GAAACAA-CTTGGC--TG
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 11691 29 -     43706 ------------------------------------------------CAACAAGGGC-----CTCA-GAAACTA-TTTGGC--TG
i Vulpes_lagopus.VulLag_flattened_line_30954             I 1 C 0
s Xerus_inauris.XerIna_scaffold_2302                          1986 26 +    224448 --------------------------G------------CA-------AA------TG-----CTCA-GAAACAAGT-TGGT--TA
i Xerus_inauris.XerIna_scaffold_2302                     I 4 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      15778 25 +     63895 --------------------------G-------------T-------AA------TT-----CTCA-GAAACAA-GTTGGC--TA
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 1 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_3601914            126 34 +       295 -------A-------AA---------A--------TATATA-------TAC-----TA-----CTCA-GATACAA-CTTGGC--TG
i Ziphius_cavirostris.ZipCav_flattened_line_3601914      C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Tarsius_wallacei.k141_254427                                1877  3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080  3 +     70052 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Glis_glis.GliGli_scaffold_19807                            32063  0 +     49224 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cephalopachus_bancanus.k141_1423433                         6085  3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Carlito_syrichta.NW_007259797.1                           156587  3 -    496798 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       7766  7 +     62944 AACT--------T---AT
s Acinonyx_jubatus.LLWD01001279.1                           828240 10 -   1699592 AA-----CTTC-TT-T-T
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     71712  6 +     87051 AA-----CT---T---T-
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 6
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511525 10 -  29979442 AA-----CTTC-TT-T-T
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             80263 10 -    347723 AA--GTTC----TT-T-T
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     75414  7 -     89534 AA--AT------T---TT
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   15692  7 -     52922 AACT--------T---AT
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15612  7 -     28001 AACT--------T---AT
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          6110  7 -     18505 AACT--------T---AT
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           6962  7 -     12518 AACT--------T---AT
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              8537  7 +     51355 AACT--------T---AT
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                1646  7 -     36483 AACT--------T---AT
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              12098  7 +     28687 AACT--------T---AT
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                  611  7 +     27940 AACT--------T---AT
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            1655  7 -      9457 AACT--------T---AT
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                              611  7 +     30492 AACT--------T---AT
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              4606  7 +     47717 AACT--------T---AT
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              1338  7 +      5663 AACT--------T---AT
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             15790  7 +     50774 AACT--------T---AT
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          676431  8 -   2318259 AA-----CTTC-T----A
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 1
s Anoura_caudifer.AnoCau_scaffold_1412                      186294 11 +    412891 AA-----CTCC-ATAT-T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             98912  8 -    100397 AA-----CTTC-T----A
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 I 1
s Aotus_azarae.k141_3104676                                  16779  7 -     33861 AACT--------T---AT
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            16776  7 -     34016 AACT--------T---AT
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299203  7 -   5030052 AACT--------T---AT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             16812  7 -     34685 AACT--------T---AT
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               29937  7 -     47192 AACT--------T---AT
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13546  5 +     20879 AG-----CT---T-----
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       12225  5 +     14667 TT----------T---AT
i Arctocebus_calabarensis.k141_2318572                   I 2 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5679  2 +     43469 AA----------------
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 6
s Avahi_laniger.k141_765380                                  54633  5 -     92717 CT----------T---AC
i Avahi_laniger.k141_765380                              I 2 C 0
s Avahi_peyrierasi.k141_1424874                              55264  5 +     85213 CT----------T---AC
i Avahi_peyrierasi.k141_1424874                          I 2 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15192661  8 +  23207421 AA-----CTTC-T----C
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 1
s Balaenoptera_bonaerensis.DF707048.1                         3126  8 -     18090 AA-----CTTC-T----C
i Balaenoptera_bonaerensis.DF707048.1                    C 0 I 1
s Beatragus_hunteri.BeaHun_scaffold_50177                    27353  8 +     34529 AA-----CGTC-T----A
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 1
s Bison_bison.KN261452.1                                    200411  8 -    288883 AA-----CTTC-T----A
i Bison_bison.KN261452.1                                 C 0 I 1
s Bos_indicus.CM003028.1                                  18363315  8 - 116941312 AA-----CTTC-T----A
i Bos_indicus.CM003028.1                                 C 0 I 1
s Bos_mutus.JH880303.1                                     1126171  8 -   1948126 AA-----CTTC-T----A
i Bos_mutus.JH880303.1                                   C 0 I 1
s Bos_taurus.CM000184.6                                   18200289  8 - 114055384 AA-----CTTC-T----A
i Bos_taurus.CM000184.6                                  C 0 I 1
s Bubalus_bubalis.KI419123.1                               2819921  8 +   4408762 AA-----CTTC-T----A
i Bubalus_bubalis.KI419123.1                             C 0 I 1
s Callibella_humilis.k141_1278103                             6663  7 -     10423 GATT--------T---AT
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_737284                                208  7 -     31217 AACT--------T---AT
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                              502  7 +      5377 GACT--------T---AT
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592363  7 - 189096842 GACT--------T---AT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1177  7 -     12329 GACT--------T---AT
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10003186  8 -  17673402 AA-----CTTC-T----A
i Camelus_bactrianus.KN276810.1                          C 0 I 1
s Camelus_dromedarius.KN272107.1                           2335662  8 -   7040546 AA-----CTTC-T----A
i Camelus_dromedarius.KN272107.1                         C 0 I 1
s Camelus_ferus.KB017975.1                                  403961  8 -   1652518 AA-----CTTC-T----A
i Camelus_ferus.KB017975.1                               C 0 I 1
s CanFam4.chr16                                           17800101 10 -  60362399 AA-----CTTC-TT-T-T
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                      849 10 -     43241 AA-----CTTC-TT-T-T
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9035544 10 -   9314153 AA-----CTTC-TT-T-T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17960020 10 -  59632846 AA-----CTTC-TT-T-T
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18501317 10 +  63665305 AA-----CTTC-TT-T-T
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18830549  8 +  46296322 AA-----CTTC-T----A
i Capra_aegagrus.CM003241.1                              C 0 I 1
s Capra_hircus.CM004588.1                                 18061269  8 -  44709034 AA-----CTTC-T----A
i Capra_hircus.CM004588.1                                C 0 I 1
s Capromys_pilorides.CapPil_scaffold_65020                    1936  3 -     12242 ------------T---AT
i Capromys_pilorides.CapPil_scaffold_65020               I 22 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6045 11 -     11696 GT-----CTCC-TTAT-T
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138227  7 +    179628 AA-----CT---T---AT
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     94480  8 +    217609 AA-----CTGC-T----A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 1
s Cebuella_niveiventris.k141_1251222                         11103  7 -     11392 GACT--------T---AT
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               7287  7 -      7577 GACT--------T---AT
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25653708  7 +  26074798 AACT--------T---AT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                1646  7 +     28840 AACT--------T---AT
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 1375  7 +     14051 AACT--------T---AT
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Ceratotherium_simum.JH767749.1                          12232401 11 +  27778364 AA-----CTTC-TTAT-T
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3428 11 -     25243 AA-----CTTC-TTAT-T
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4476629  7 +   4669795 AACT--------T---AT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        1131  7 +     17872 AACT--------T---AT
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           1788  7 -     14043 AACT--------T---AT
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9821  7 +     27781 AACT--------T---AT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         9989  7 -     20310 AACT--------T---AT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          12969  7 +     29689 AACT--------T---AT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7715  7 -     20078 AACT--------T---AT
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          15637  7 -     27936 AACT--------T---AT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            4503  7 -     17152 AACT--------T---AT
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38818048  7 +  39242232 AACT--------T---AT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223737  7 -  21565898 AACT--------T---AT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40856  7 -     53127 AACT--------T---AT
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        1107  7 +     13442 AACT--------T---AT
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15656  7 -     27947 AACT--------T---AT
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         15632  7 +     17596 AACT--------T---AT
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          1675  7 +     14005 AACT--------T---AT
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1418  3 -      8501 ------------T---AT
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       I 7 C 0
s Cheirogaleus_major.k141_333249                             22012  5 -     52598 CT----------T---AT
i Cheirogaleus_major.k141_333249                         I 2 C 0
s Cheirogaleus_medius.k141_1055463                           17383  5 +     57038 CT----------T---AT
i Cheirogaleus_medius.k141_1055463                       I 2 C 0
s Chinchilla_lanigera.JH722012.1                           1253811  3 +   2543920 ------------T---AT
i Chinchilla_lanigera.JH722012.1                         I 22 C 0
s Chiropotes_albinasus.k141_2206961                           1991  7 -     15524 AACT--------T---AC
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18429614  7 -  18827391 AACT--------T---AT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       16050  7 -     50209 AACT--------T---AT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135423051  7 + 135778131 AACT--------T---AT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 19239  3 +     19366 ------------t---ag
i Choloepus_didactylus.ChoDid_scaffold_45914             I 7 C 0
s Choloepus_hoffmanni.KN194906.1                            174313  3 +    839153 ------------T---AG
i Choloepus_hoffmanni.KN194906.1                         I 7 C 0
s Colobus_angolensis.KN981557.1                            1911529  7 +   2368649 AACT--------T---AT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949781  7 + 200372422 AACT--------T---AT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              38063  7 +     84244 AACT--------T---AT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17548988  1 -  53390261 G-----------------
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1404 11 +     23735 AA--TTTC----TTAT-T
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 50950  7 +     63868 AA-----CT---T---TT
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11668463  6 + 224834208 AA-----CT---T---T-
i Cricetulus_griseus.LT883664.1                          C 0 I 6
s Crocidura_indochinensis.CroInd_scaffold_37019               3882  8 -     19598 AA-----CTTT-T----T
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 I 4
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29422 10 -     87169 AA-----CTTC-TT-T-T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    837999  7 +   1526836 AA-----CT---T---TA
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            64435  3 +   2246927 ------------T---GT
i Dasypus_novemcinctus.JH564415.1                        I 7 C 0
s Daubentonia_madagascariensis.ctg71                      12538215  5 -  12879189 CT----------T---AT
i Daubentonia_madagascariensis.ctg71                     I 2 C 0
s Delphinapterus_leucas.KZ290073.1                        16812299  8 +  35494412 AA-----CTTC-T----C
i Delphinapterus_leucas.KZ290073.1                       C 0 I 1
s Desmodus_rotundus.KZ672289.1                             8631042 11 +  20541912 AA-----CTCC-TTAT-T
i Desmodus_rotundus.KZ672289.1                           I 1 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  674249 11 +   1390856 AA-----CTTC-TTAT-T
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    7001 11 +    198055 AA-----CTTC-TTAT-T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37290  3 +     67921 ------------T---AT
i Dinomys_branickii.DinBra_scaffold_21862                I 22 C 0
s Echinops_telfairi.JH980293.1                            48781696  9 + 111700974 AA--T--CT-C-T---AT
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.KE759718.1                                  11476  7 +     11740 AA-----CTTC-T-----
i Eidolon_helvum.KE759718.1                              C 0 I 1
s Elaphurus_davidianus.JRFZ01104969.1                       311586  8 +    607251 AA-----CTTC-T----A
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 1
s Elephantulus_edwardii.JH947257.1                         1098661  9 +  10337057 TA--T--C--ACT---GT
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          21433  6 -    110024 AA-----CT---T---T-
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 6
s Ellobius_talpinus.LOJH01081419.1                            1339  6 +      8657 AA-----CT---T---T-
i Ellobius_talpinus.LOJH01081419.1                       C 0 I 6
s Enhydra_lutris.KZ291758.1                               16330268 10 -  41312741 AA-----CTTC-TT-T-T
i Enhydra_lutris.KZ291758.1                              I 13 C 0
s Eptesicus_fuscus.JH977646.1                              2146660 11 -  14770903 AA-----CTTC-TTAT-T
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1284506 11 +   4378816 AA-----CTTC-TTAT-T
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18532326 11 -  39960074 AA-----CTTC-TTAT-T
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               34355 11 +    498745 AA-----CTTC-TTAT-T
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3329192  9 -   7059049 CA--AGT-T-A-C----T
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21206219  7 -  21539334 AACT--------T---AT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11973  8 +    133382 AA-----CTTC-T----C
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 1
s Eubalaena_japonica.EubJap_flattened_line_31514             25910  8 -     44125 AA-----CTTC-T----C
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 I 1
s Eulemur_albifrons.k141_576796                              41061  5 -     44621 CT----------T---AT
i Eulemur_albifrons.k141_576796                          I 2 C 0
s Eulemur_collaris.k141_377015                                7442  5 -     16928 CT----------T---AT
i Eulemur_collaris.k141_377015                           I 2 C 0
s Eulemur_coronatus.k141_885031                              16474  5 -     25546 CT----------T---AT
i Eulemur_coronatus.k141_885031                          I 2 C 0
s Eulemur_flavifrons.k141_1184614                            13670  5 +     26330 CT----------T---AT
i Eulemur_flavifrons.k141_1184614                        I 2 C 0
s Eulemur_fulvus.k141_544389                                 14905  5 +     23973 CT----------T---AT
i Eulemur_fulvus.k141_544389                             I 2 C 0
s Eulemur_macaco.k141_1562045                                13667  5 +     75513 CT----------T---AT
i Eulemur_macaco.k141_1562045                            I 2 C 0
s Eulemur_mongoz.k141_232305                                 11597  5 +     97555 CT----------T---AT
i Eulemur_mongoz.k141_232305                             I 2 C 0
s Eulemur_rubriventer.k141_774594                             1089  5 +     13026 CT----------T---AT
i Eulemur_rubriventer.k141_774594                        I 2 C 0
s Eulemur_rufus.k141_1476633                                  5141  5 -     17153 CT----------T---AT
i Eulemur_rufus.k141_1476633                             I 2 C 0
s Eulemur_sanfordi.k141_1122526                              14714  5 +    111500 CT----------T---AT
i Eulemur_sanfordi.k141_1122526                          I 2 C 0
s Felis_catus.CM001381.2                                  20237882 10 + 206538554 AA-----CTTC-TT-T-T
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20196725 10 + 205367284 AA-----CTTC-TT-T-T
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 10479 10 -     36744 AA-----CTTC-TT-T-T
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             851342  3 +   3816255 ------------T---AG
i Fukomys_damarensis.KN121974.1                          I 22 C 0
s Galago_moholi.ctg2040                                     427528  5 -    453645 CT----------T---AT
i Galago_moholi.ctg2040                                  I 2 C 0
s Galago_senegalensis.k141_631886                             5218  5 +     11339 CT----------T---AT
i Galago_senegalensis.k141_631886                        I 2 C 0
s Galagoides_demidoff.k141_1711393                            2516  5 +     41679 CT----------T---AT
i Galagoides_demidoff.k141_1711393                       I 2 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               2125  7 -      9135 AA-----CT---T---AC
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     609550  8 -    660261 AA-----CTTC-T----A
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 I 1
s Gorilla_beringei.k141_3596273                              17021  7 -     32273 AACT--------T---AT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186339157  7 + 186649187 AACT--------T---AT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33542  8 +     78134 AA-----CTTATT-----
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           7769  5 -     19426 CT----------T---AT
i Hapalemur_alaotrensis.k141_170648                      I 2 C 0
s Hapalemur_gilberti.k141_488810                             12922  5 -     15286 CT----------T---AT
i Hapalemur_gilberti.k141_488810                         I 2 C 0
s Hapalemur_griseus.k141_1511508                             14561  5 +     18253 CT----------T---AT
i Hapalemur_griseus.k141_1511508                         I 2 C 0
s Hapalemur_meridionalis.k141_248335                         14662  5 -     41752 CT----------T---AT
i Hapalemur_meridionalis.k141_248335                     I 2 C 0
s Hapalemur_occidentalis.k141_907772                         14499  5 -     16460 CT----------T---AT
i Hapalemur_occidentalis.k141_907772                     I 2 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243261 10 +    327341 GA-----CTTC-TT-T-T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18754  8 +     36099 AA-----CTTC-T----A
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 I 1
s Heterocephalus_glaber.JH602082.1                        20663098  3 +  22651954 ------------T---AG
i Heterocephalus_glaber.JH602082.1                       I 22 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1831  1 +      7595 -----------------T
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       111436 11 +   1711038 AA-----CTTC-CTAC-T
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               42866 11 +     43066 AA-----CTTC-CTAT-T
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    435822  7 +    630532 AACT--------T---AT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45967 10 +     55795 AA--TTTC----TT-C-T
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83988  7 +    135385 AA-----CT---T---AC
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7521826  5 -   7955117 AG-----CT---T-----
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   23456  5 +     31101 CT----------T---AG
i Indri_indri.k141_3655594                               I 2 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               23514  8 +     23964 AA-----CTTC-T----C
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 I 1
s Jaculus_jaculus.JH725527.1                               8278075  7 -   9596543 AA--AT------T---TT
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                2871  8 -      3359 AA-----CTTC-T----C
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 I 1
s Lasiurus_borealis.LasBor_scaffold_32767                    17318 11 -     42476 AA-----CTTC-CTAT-T
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15525014  5 -  30322482 CT----------T---AT
i Lemur_catta.scaffold_24                                I 2 C 0
s Leontocebus_fuscicollis.k141_1820339                        8942  7 +     64341 AACT--------T---AC
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           1282  7 -     35062 AACT--------T---AC
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        8969  7 +     35603 AACT--------T---AC
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    30582  7 +     38576 AACT--------T---AT
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         27286  7 +     66356 AACT--------T---AT
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         11904  5 -     23766 CT----------T---AT
i Lepilemur_ankaranensis.k141_596936                     I 2 C 0
s Lepilemur_dorsalis.k141_577674                             29958  5 +     45836 CT----------T---AT
i Lepilemur_dorsalis.k141_577674                         I 2 C 0
s Lepilemur_ruficaudatus.k141_121139                          2503  5 +     25010 CT----------T---AT
i Lepilemur_ruficaudatus.k141_121139                     I 2 C 0
s Lepilemur_septentrionalis.k141_185316                      27898  5 +     54090 CT----------T---AT
i Lepilemur_septentrionalis.k141_185316                  I 2 C 0
s Leptonychotes_weddellii.KB714746.1                       3043996 10 +   3914936 AA-----CTTC-TT-T-T
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     7385  7 -     14121 AG-----CT---T---AC
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             268565  8 -    662738 AA-----CTTC-T----C
i Lipotes_vexillifer.KE559953.1                          C 0 I 1
s Lophocebus_aterrimus.ctg367                              1438172  7 +   1826925 AACT--------T---AT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            6768  5 +     11245 CT----------T---at
i Loris_lydekkerianus.k141_2539221                       I 2 C 0
s Loris_tardigradus.ctg83                                  1005589  5 +   6120653 CT----------T---at
i Loris_tardigradus.ctg83                                I 2 C 0
s Loxodonta_africana.GL010049.1                            4218293  9 -  43346337 AA-----CCCC-T---AT
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17956260 10 -  59628241 AA-----CTTC-TT-T-T
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               7987  7 +     40492 AACT--------T---AT
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59677246  7 +  60120075 AACT--------T---AT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13762  7 -     26193 AACT--------T---AT
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            81546  7 -    114318 AACT--------T---AT
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  7233  7 -     23192 AACT--------T---AT
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16706  7 -     29190 AACT--------T---AT
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  25271  7 +     37952 AACT--------T---AT
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186840360  7 + 187317192 AACT--------T---AT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458923  7 -  25927173 AACT--------T---AT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  81119  7 +     89720 AACT--------T---AT
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 8120  7 +     20474 AACT--------T---AT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   7920  7 -     14993 AACT--------T---AT
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  330786  7 -    668171 AACT--------T---AT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 6233  7 -     24072 AACT--------T---AT
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26858  7 -     45290 AACT--------T---AT
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91570  7 +     94391 AA--TTTC----T-----
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 1
s Mandrillus_leucophaeus.scaffold280                      23938449  7 -  24302211 AACT--------T---AT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352571  7 +    752769 AACT--------T---AT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              19187 11 +    737560 AA-----CATC-TTAC-T
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              51173 11 -    317179 AA-----CATC-TTAC-T
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33104021  5 -  40650429 AG-----CT---T-----
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        14284 11 -    207569 AA-----CTTT-TTAT-T
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             11008 10 +     13704 AA-----CTTC-TT-T-T
i Mellivora_capensis.MelCap_flattened_line_69365         I 13 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 33661  6 +    140813 AA-----C--G-T---T-
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 6
s Mesocricetus_auratus.KB708134.1                         12183125  6 -  29670104 AA-----CT---T---T-
i Mesocricetus_auratus.KB708134.1                        C 0 I 6
s Mesoplodon_bidens.MesBid_scaffold_108144                    4182  8 +     10310 AA-----CTTC-T----C
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 I 1
s Mico_argentatus.k141_1239457                                7099  7 -      7380 GACT--------T---AT
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_schneideri.k141_1950671                                      7072  7 -      7356 GACT--------T---AT
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18292456  5 -  93316391 CT----------T---AT
i Microcebus_murinus.CM007674.1                          I 2 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    23603  9 -    145209 AA--T--CT-C-T---AT
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                16582 11 -     19307 AG-----CTCC-TTAT-T
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11261418  6 -  27267610 AA-----CT---T---T-
i Microtus_ochrogaster.CM001695.1                        C 0 I 6
s Miniopterus_natalensis.LDJU01000034.1                    1851539  2 +   8254450 AA----------------
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 4
s Miniopterus_schreibersii.MinSch_scaffold_18080             35219  2 +     64694 AA----------------
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 4
s Miopithecus_ogouensis.k141_534055                          10153  7 -     28506 AACT--------T---AT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6863 10 -      8324 AA-----CTTC-TT-T-T
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                     10000  5 -     37649 CT----------T---AT
i Mirza_zaza.k141_952172                                 I 2 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    27688  8 -    437263 AA-----CTTC-T----C
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 1
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142583 11 -    366855 AA--TTTC----CTAT-T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   1631  8 +     82753 AA-----CTTC-T----A
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 1
s Mungos_mungo.MunMun_flattened_line_23663                   36362 10 +     37127 GA-----CTTC-TT-T-T
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           7766  2 +     14753 AA----------------
i Murina_feae.MurFea_scaffold_85699                      C 0 I 6
s Mus_caroli.LT608237.1                                   84362277  6 - 120012414 AC-----CT---T---T-
i Mus_caroli.LT608237.1                                  C 0 I 6
s Mus_musculus.chr8                                       87651270  6 - 129401213 AC-----CT---T---T-
i Mus_musculus.chr8                                      C 0 I 6
s Mus_pahari.LT608297.1                                   31355924  6 -  89631738 AC-----CT---T---T-
i Mus_pahari.LT608297.1                                  C 0 I 6
s Mus_spretus.CM004101.1                                  90753333  6 - 130317789 AC-----CT---T---T-
i Mus_spretus.CM004101.1                                 C 0 I 6
s Mustela_putorius.JH418006.1                               302419 10 -  14710649 GA-----CTTC-TT-T-T
i Mustela_putorius.JH418006.1                            I 13 C 0
s Myotis_brandtii.KE162005.1                                281405 11 -  10118263 AA-----CTTC-TTAT-T
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1588660 11 -   6019432 AA-----CTTC-TTAT-T
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3904757 11 -   4330536 AA-----CTTC-TTAT-T
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_353577                         361 11 -      1254 AA-----CTTC-TTAT-T
i Myotis_myotis.MyoMyo_scaffold_353577                   C 0 n 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190181  3 +    196477 ------------T---AT
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 7 C 0
s Nannospalax_galili.KL204047.1                            2034961  7 -   3037898 ga-------tt-t---tt
i Nannospalax_galili.KL204047.1                          C 0 I 505
s Nasalis_larvatus.k141_413338                               16157  7 +     21681 AACT--------T---AT
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308456 10 +  31847680 AA-----CTTC-TT-T-T
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5866645  8 +   7148211 AA-----CTTC-T----C
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 1
s Noctilio_leporinus.NocLep_scaffold_251                    758801 11 +    783361 AG-----CTTC-TAAT-T
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150322 10 -   9404916 AA-----CTTC-TT-T-T
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102587134  5 - 196305487 CT----------T---AT
i Nycticebus_bengalensis.LG01                            I 2 C 0
s Nycticebus_coucang.k141_1127096                             1058  5 +      2075 CT----------T---AT
i Nycticebus_coucang.k141_1127096                        I 2 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105762489  5 + 199412804 CT----------C---AT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 2 C 0
s Ochotona_princeps.JH802162.1                             1364740  7 +   3988456 AG-----CT---T---GT
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              507601 10 -   2017862 AA-----CTTC-TT-T-T
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          77463  8 -    150152 AA-----CTTC-T----A
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 1
s Ondatra_zibethicus.OndZib_scaffold_46174                   26067  6 +     28053 AA-----CT---T---T-
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 6
s Onychomys_torridus.OnyTor_scaffold_2986                    81103  6 +    102263 AA-----CT---T---T-
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 7
s Orcinus_orca.KB316932.1                                  2782568  8 -  10937097 AA-----CTTC-T----C
i Orcinus_orca.KB316932.1                                C 0 I 1
s Orycteropus_afer.OryAfe_flattened_line_144387              11060  9 -     18566 AA--T--CT-C-T---AT
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67148244  7 + 174332312 AA--TT------T---GC
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       463272 10 -    559221 AA-----CTTC-TT-T-T
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         5043  5 +      8798 CT----------T---AT
i Otolemur_crassicaudatus.k141_222918                    I 2 C 0
s Otolemur_garnettii.GL873799.1                             697205  5 -   1103335 CT----------T---AT
i Otolemur_garnettii.GL873799.1                          I 2 C 0
s Ovis_aries.CM001607.2                                   17586729  8 +  44047080 AA-----CTTC-T----A
i Ovis_aries.CM001607.2                                  C 0 I 1
s Ovis_canadensis.OviCan_scaffold_2572                      174706  8 -    191736 AA-----CTTC-T----A
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 I 1
s Pan_paniscus.KQ411613.1                                    45109  7 +     80009 AACT--------T---AT
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189144007  7 + 189151597 AACT--------T---AT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152086 10 +    230217 AA-----CTTC-TT-T-T
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                265295 10 +  18783137 AA-----CTTC-TT-T-T
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4722175 10 -   8748460 AA-----CTTC-TT-T-T
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1265624  8 -   2937107 AA-----CTTC-T----A
i Pantholops_hodgsonii.KE114653.1                        C 0 I 1
s Papio_anubis.CM001495.2                                183444249  7 + 183742232 AACT--------T---AT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7895  7 +     20448 AACT--------T---AT
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20564707  7 +  20919399 AACT--------T---AT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6639  7 +     41871 AACT--------T---AT
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     9932  7 +     27711 AACT--------T---AT
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                   929  7 -     11374 AACT--------T---AT
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13581 10 -     78924 AA-----CTTC-TT-T-T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           11034  5 +     13100 CT----------T---AT
i Perodicticus_ibeanus.k141_855320                       I 2 C 0
s Perodicticus_potto.k141_1092580                             9428  5 +     25941 CT----------T---AT
i Perodicticus_potto.k141_1092580                        I 2 C 0
s Peromyscus_maniculatus.KI615324.1                       18195683  6 -  18517816 AA-----CT---T---T-
i Peromyscus_maniculatus.KI615324.1                      C 0 I 6
s Petromus_typicus.PetTyp_scaffold_42190                     29003  3 -     29689 ------------T---AG
i Petromus_typicus.PetTyp_scaffold_42190                 I 22 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               9607  8 +     63832 AA-----CTTC-T----C
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 1
s Piliocolobus_badius.k141_1234363                           44648  7 +     62158 AACT--------T---AT
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        39395  7 +     89929 AACT--------T---AT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40811  7 +     51399 AACT--------T---AT
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14297050  7 -  14605196 AACT--------T---AT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2697 11 +     22620 AC-----CATC-TTCT-T
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           35311  5 +     35617 AA-----C----T----C
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 I 1
s Pongo_abelii.CM009266.2                                189156762  8 + 189387572 AACT--------TT--AT
i Pongo_abelii.CM009266.2                                I 24610 T 24611
s Pongo_pygmaeus.ctg66                                     9571759  7 +   9816681 AACT--------T---AT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               74332  7 -     81375 AACT--------T---AT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              6153  7 +     19060 AACT--------T---AT
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 14286  1 -     22811 -----------------T
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2597694  5 -   4620579 CT----------T---AT
i Prolemur_simus.MPIZ01000396.1                          I 2 C 0
s Propithecus_coquerelli.NW_012148875.1                     991676  5 +   2598838 CT----------T---AT
i Propithecus_coquerelli.NW_012148875.1                  I 2 C 0
s Propithecus_coronatus.k141_347390                          29988  5 +     38485 CT----------T---AT
i Propithecus_coronatus.k141_347390                      I 2 C 0
s Propithecus_diadema.k141_58108                              2030  5 -     13098 CT----------T---AT
i Propithecus_diadema.k141_58108                         I 2 C 0
s Propithecus_edwardsi.k141_1176054                          27509  5 +     35766 CT----------T---AT
i Propithecus_edwardsi.k141_1176054                      I 2 C 0
s Propithecus_perrieri.k141_1200571                           5696  5 -     24134 CT----------T---AT
i Propithecus_perrieri.k141_1200571                      I 2 C 0
s Propithecus_tattersalli.k141_790011                        29521  5 -     67325 CT----------T---AT
i Propithecus_tattersalli.k141_790011                    I 2 C 0
s Propithecus_verreauxi.k141_956661                           5744  5 -      6182 CT----------T---AT
i Propithecus_verreauxi.k141_956661                      I 2 C 0
s Psammomys_obesus.NESX01036370.1                            11307  6 -     21651 AA-----CT---T---T-
i Psammomys_obesus.NESX01036370.1                        C 0 I 6
s Pteronotus_parnellii.KE909381.1                            16091 11 -     21811 AA-----CTTC-TCGG-T
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41223 10 +     42204 AA-----CTTC-TT-T-T
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 33 C 0
s Pteropus_alecto.KB030862.1                              22977710  7 +  28871421 AA-----CTTC-T-----
i Pteropus_alecto.KB030862.1                             C 0 I 1
s Pteropus_vampyrus.KN534172.1                                7763  7 -      8028 AA-----CTTC-T-----
i Pteropus_vampyrus.KN534172.1                           C 0 I 1
s Puma_concolor.QAVW01001104.1                            20275248 10 -  38429054 AA-----CTTC-CT-T-T
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             16139  7 -     91421 AACT--------T---AT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7610259  7 +   7812017 AACT--------T---AT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             16138  7 -     72585 AACT--------T---AT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6206  8 +     55207 AA-----CTTC-T----A
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 1
s Rattus_norvegicus.chr16                                 53571523  6 +  90668790 AA-----C--C-T---T-
i Rattus_norvegicus.chr16                                C 0 I 6
s Rhinolophus_sinicus.LVEH01000134.1                        367923 11 -   3329780 AA-----CT-ACTTAT-T
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             7849  7 -     11128 AACG--------T---AT
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91237198  7 - 195417433 AACT--------T---AT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672854  7 +   7961872 AACT--------T---AT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88752  7 -     96226 AA-----CTTC-T-----
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 1
s Saguinus_bicolor.k141_8081                                  2256  7 +     42994 AACT--------T---AC
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                              951  7 +      2253 AACT--------T---AC
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               1380  7 -      8737 AACT--------T---AC
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                              1033  7 +      2343 AACT--------T---AC
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209475910  7 + 209938924 AACT--------T---AC
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                 356  7 -      7576 AACT--------T---AC
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951979  7 - 121099817 AACG--------T---AT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24321  7 +     46362 AACG--------T---AC
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               24416  7 +     45824 AACG--------T---AC
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             41095  7 -     64574 AACG--------T---AT
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4168  7 -     23631 AACG--------T---AT
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 24312  7 -     61129 AACG--------T---AC
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5421662  7 -   5703754 AACT--------T---AT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          56903  7 -     80660 AACT--------T---AT
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154129 11 -    313613 AA--TTTCTTA-T----T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                         1030  7 -     12572 AACT--------T---AT
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27880  7 +     39453 AACT--------T---AT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            8398  7 +     27826 AACT--------T---AT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             7920  7 -     19483 AACT--------T---AT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      1221  7 -     12762 AACT--------T---AT
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           1082  7 +     13763 AACT--------T---AT
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     1216  6 -     30804 AA-----CT---T---T-
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 I 6
s Solenodon_paradoxus.SolPar_flattened_line_126               4687  8 +   1910179 AA-----CTTA-C----T
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13651929  8 -  18376816 AA--TTTC----T----T
i Sorex_araneus.JH798187.1                               C 0 I 4
s Spermophilus_dauricus.KZ294078.1                         1954879  5 -   3870691 AG-----CT---T-----
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             31684 10 +     97271 AA-----CTTC-TT-T-T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              19266 10 -    196729 GA-----CTTC-TT-T-T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.JH118708.1                                      37339  8 -     47482 AA-----CTTC-T----A
i Sus_scrofa.JH118708.1                                  C 0 I 1
s Tadarida_brasiliensis.TadBra_scaffold_25820                11751 11 +     41958 AA-----CTTC-TCAC-T
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73546  3 +    116680 ------------T---AT
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 7 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      119713  5 -    156842 ------------TTAT-T
i Tapirus_indicus.TapInd_scaffold_9301                   I 6 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    388180  2 +    539355 AA----------------
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 6
s Theropithecus_gelada.CM009954.1                        186429567  7 + 186847797 AACT--------T---AT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106308  3 +    114563 ------------T---AA
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 22 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   7307  3 +      8208 ------------T---AT
i Tolypeutes_matacus.TolMat_scaffold_228639              I 7 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     82138 11 +    610378 AA-----CTCC-TTAT-T
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         11971  7 -     20410 AACT--------T---AT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      1085  7 -     12674 AACT--------T---AT
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       12072  7 +     19930 AACT--------T---AT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       8483  7 -     19997 AACT--------T---AT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48622  7 -     60166 AACT--------T---AT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        16094  7 -     27529 AACT--------T---AT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     16038  7 -     18194 AACT--------T---AT
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9750  7 -     21137 AACT--------T---AT
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    8453  7 -     10723 AACT--------T---AT
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7625  7 +      9834 AACT--------T---AT
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        25938  7 +     32220 AACT--------T---AT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5940040  7 +   6242583 AACT--------T---AT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        9291  7 +     20839 AACT--------T---AT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                     564  8 +     27266 AA-----CTTC-T----A
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 I 1
s Trichechus_manatus.JH594705.1                            4294198  9 +  10818551 AA--T--C-CG-C---AT
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2156720  5 +   4065304 CA--T-----G-T-----
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                    10163  7 -     10553 CA--TT------C---AA
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15738813  8 +  33153633 AA-----CTTC-T----C
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 1
s Uropsilus_gracilis.UroGra_scaffold_12083                   54226 11 -     77625 AA--CTTCTTA-T----T
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4851372 10 -   5085361 AA-----CTTC-TT-T-T
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  12353  5 +     50397 CT----------T---AT
i Varecia_rubra.k141_590885                              I 2 C 0
s Varecia_variegata.k141_1128296                             12412  5 +     24756 CT----------T---AT
i Varecia_variegata.k141_1128296                         I 2 C 0
s Vicugna_pacos.KN270157.1                                 5372712  8 -   5488506 AA-----CTTC-C----A
i Vicugna_pacos.KN270157.1                               C 0 I 1
s Vulpes_lagopus.VulLag_flattened_line_30954                 11720 10 -     43706 AA-----CTTC-TT-T-T
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          2012  5 +    224448 AG-----CT---T-----
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      15803  7 +     63895 AA--AT------G---TT
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_3601914            160  8 +       295 AA-----CTTC-T----C
i Ziphius_cavirostris.ZipCav_flattened_line_3601914      C 0 I 1
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Tarsius_wallacei.k141_254427                                1877  3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080  3 +     70052 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     72102 22 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Glis_glis.GliGli_scaffold_19807                            32063  0 +     49224 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  36783 28 +     51376 I
e Cephalopachus_bancanus.k141_1423433                         6085  3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Carlito_syrichta.NW_007259797.1                           156587  3 -    496798 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       7773 5 +     62944 T-AAGG
s Acinonyx_jubatus.LLWD01001279.1                           828250 4 -   1699592 C-A-GG
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511535 4 -  29979442 A-A-GA
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             80273 4 -    347723 A-A-GG
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     75421 4 -     89534 A-A-AG
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   15699 5 -     52922 T-AAGG
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15619 5 -     28001 T-ACGG
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          6117 5 -     18505 T-ACGG
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           6969 5 -     12518 T-ACGG
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              8544 5 +     51355 T-AAGG
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                1653 5 -     36483 T-AAGG
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              12105 5 +     28687 T-AAGG
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                  618 5 +     27940 T-AAGG
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            1662 5 -      9457 T-AAGG
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                              618 5 +     30492 T-AAGG
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              4613 5 +     47717 T-AAGG
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              1345 5 +      5663 T-AAGG
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             15797 5 +     50774 T-AAGG
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      186305 4 +    412891 G-A-GG
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_3104676                                  16786 5 -     33861 T-CAGG
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            16783 5 -     34016 T-CAGG
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299210 5 -   5030052 T-CAGG
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             16819 5 -     34685 T-CAGG
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               29944 5 -     47192 T-CAGG
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13551 3 +     20879 --A-AG
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       12230 5 +     14667 TAA-GA
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5687 4 +     43469 G-A-GG
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 6 C 0
s Avahi_laniger.k141_765380                                  54638 5 -     92717 TAA-AA
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              55269 5 +     85213 TAA-AA
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             6670 5 -     10423 T-AAGG
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_737284                                215 5 -     31217 T-AAGG
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                              509 5 +      5377 T-AAGG
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592370 5 - 189096842 T-AAGG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1184 5 -     12329 T-AAGG
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s CanFam4.chr16                                           17800111 4 -  60362399 A-A-ga
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                      859 4 -     43241 A-A-ga
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9035554 4 -   9314153 A-A-ga
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17960030 4 -  59632846 A-A-ga
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18501327 4 +  63665305 A-A-ga
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1939 4 -     12242 T-A-AG
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6056 4 -     11696 G-A-GG
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138234 4 +    179628 T-A-Ag
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                         11110 5 -     11392 T-AAGG
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               7294 5 -      7577 T-AAGG
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25653715 5 +  26074798 T-AAGG
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                1653 5 +     28840 T-AAGG
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 1382 5 +     14051 T-AAGG
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Ceratotherium_simum.JH767749.1                          12232412 4 +  27778364 A-A-GG
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3439 4 -     25243 A-A-GG
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4476636 5 +   4669795 T-AAGG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        1138 5 +     17872 T-AAGG
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           1795 5 -     14043 T-AAGG
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9828 5 +     27781 T-AAGG
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                         9996 5 -     20310 T-AAGG
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          12976 5 +     29689 T-AAGG
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7722 5 -     20078 T-AAGG
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          15644 5 -     27936 T-AAGG
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            4510 5 -     17152 T-AAGG
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38818055 5 +  39242232 T-AAGG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223744 5 -  21565898 T-AAGG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40863 5 -     53127 T-AAGG
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        1114 5 +     13442 T-AAGG
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15663 5 -     27947 T-AAGG
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         15639 5 +     17596 T-AAGG
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          1682 5 +     14005 T-AAGG
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1421 4 -      8501 T-A-AG
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             22017 5 -     52598 TAA-GA
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           17388 5 +     57038 TAA-GA
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1253814 4 +   2543920 T-A-AG
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2206961                           1998 5 -     15524 T-AAGG
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18429621 5 -  18827391 T-ACGG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       16057 5 -     50209 T-ACGG
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135423058 5 + 135778131 T-ACGG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 19242 4 +     19366 g-a-ag
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            174316 4 +    839153 G-A-AG
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1911536 5 +   2368649 T-AAGG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949788 5 + 200372422 T-AAGG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              38070 5 +     84244 T-AAGG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17548989 3 -  53390261 --A-GA
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1415 4 +     23735 A-A-GG
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 50957 4 +     63868 A-A-AG
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               3894 1 -     19598 A-----
i Crocidura_indochinensis.CroInd_scaffold_37019          I 4 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29432 4 -     87169 A-A-GG
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    838006 4 +   1526836 T-A-AG
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  36811 1 +     51376 -----G
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 28 C 0
s Dasypus_novemcinctus.JH564415.1                            64438 4 +   2246927 G-A-AG
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12538220 5 -  12879189 TAA-GG
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8631053 4 +  20541912 G-A-GG
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  674260 4 +   1390856 A-A-gg
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    7012 4 +    198055 A-A-GG
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37293 1 +     67921 -----G
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Echinops_telfairi.JH980293.1                            48781705 4 + 111700974 T-A-AG
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.KE759718.1                                  11484 4 +     11740 A-A-GT
i Eidolon_helvum.KE759718.1                              I 1 C 0
s Elephantulus_edwardii.JH947257.1                         1098670 4 +  10337057 T-A-GG
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16330278 4 -  41312741 A-A-GG
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2146671 4 -  14770903 A-A-GG
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1284517 4 +   4378816 A-A-gg
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18532337 4 -  39960074 A-A-GG
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               34366 4 +    498745 A-A-GG
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3329201 4 -   7059049 A-A-AT
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21206226 5 -  21539334 T-AAGG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_576796                              41066 5 -     44621 TAA-GA
i Eulemur_albifrons.k141_576796                          C 0 C 0
s Eulemur_collaris.k141_377015                                7447 5 -     16928 TAA-GA
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              16479 5 -     25546 TAA-GA
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            13675 5 +     26330 TAA-GA
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14910 5 +     23973 TAA-GA
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                13672 5 +     75513 TAA-GA
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 11602 5 +     97555 TAA-GA
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                             1094 5 +     13026 TAA-GA
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  5146 5 -     17153 TAA-GA
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              14719 5 +    111500 TAA-GA
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237892 4 + 206538554 G-A-GG
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20196735 4 + 205367284 G-A-GG
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 10489 4 -     36744 G-A-GG
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             851345 4 +   3816255 T-A-AG
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg2040                                     427533 5 -    453645 TAA-GA
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             5223 5 +     11339 TAA-GA
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            2521 5 +     41679 TAA-GA
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               2132 4 -      9135 T-A-AG
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              17028 5 -     32273 T-AAGG
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186339164 5 + 186649187 T-AAGG
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33550 3 +     78134 --A-AG
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           7774 5 -     19426 TAA-GA
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12927 5 -     15286 TAA-GA
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             14566 5 +     18253 TAA-GA
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         14667 5 -     41752 TAA-AA
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         14504 5 -     16460 TAA-GA
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243271 4 +    327341 A-A-GG
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20663101 4 +  22651954 T-A-AG
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1832 4 +      7595 C-A-GG
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       111447 4 +   1711038 A-A-GG
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               42877 4 +     43066 A-A-GG
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    435829 5 +    630532 T-AAGG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45977 4 +     55795 A-A-GG
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      83995 4 +    135385 T-A-AG
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7521831 3 -   7955117 --A-AG
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   23461 5 +     31101 TAA-GA
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8278082 4 -   9596543 A-A-AG
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    17329 4 -     42476 A-A-AG
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15525019 5 -  30322482 TAA-GA
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        8949 5 +     64341 T-AAGG
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           1289 5 -     35062 T-AAGG
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        8976 5 +     35603 T-AAGG
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    30589 5 +     38576 T-AAGG
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         27293 5 +     66356 T-AAGG
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         11909 5 -     23766 TAA-GA
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29963 5 +     45836 TAA-GA
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          2508 5 +     25010 TAA-GA
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27903 5 +     54090 TAA-GA
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3044006 4 +   3914936 A-A-gg
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     7392 4 -     14121 T-G-GG
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1438179 5 +   1826925 T-AAGG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2539221                            6773 5 +     11245 taa-ga
i Loris_lydekkerianus.k141_2539221                       C 0 N 0
s Loris_tardigradus.ctg83                                  1005594 5 +   6120653 taa-ga
i Loris_tardigradus.ctg83                                C 0 I 8016
s Loxodonta_africana.GL010049.1                            4218302 4 -  43346337 T-A-GG
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17956270 4 -  59628241 A-A-ga
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               7994 5 +     40492 T-AAGG
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59677253 5 +  60120075 T-AAGG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13769 5 -     26193 T-AAGG
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            81553 5 -    114318 T-AAGG
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  7240 5 -     23192 T-AAGG
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16713 5 -     29190 T-AAGG
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  25278 5 +     37952 T-AAGG
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186840367 5 + 187317192 T-AAGG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458930 5 -  25927173 T-AAGG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  81126 5 +     89720 T-AAGG
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 8127 5 +     20474 T-AAGG
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   7927 5 -     14993 T-AAGG
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  330793 5 -    668171 T-AAGG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 6240 5 -     24072 T-AAGG
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26865 5 -     45290 T-AAGG
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91578 4 +     94391 A-A-GT
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 1 C 0
s Mandrillus_leucophaeus.scaffold280                      23938456 5 -  24302211 T-AAGG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352578 5 +    752769 T-AAGG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              19198 4 +    737560 A-A-GG
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              51184 4 -    317179 A-A-GG
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33104026 3 -  40650429 --A-AG
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        14295 4 -    207569 A-A-AG
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             11018 4 +     13704 A-A-GG
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mico_argentatus.k141_1239457                                7106 5 -      7380 T-AAGG
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_schneideri.k141_1950671                                      7079 5 -      7356 T-AAGG
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18292461 5 -  93316391 TAA-GA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    23612 4 -    145209 T-A-AG
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                16593 4 -     19307 G-A-GG
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miopithecus_ogouensis.k141_534055                          10160 5 -     28506 T-AAGG
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6873 4 -      8324 A-A-GG
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                     10005 5 -     37649 TAA-GA
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142594 4 -    366855 G-A-GG
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   36372 4 +     37127 A-A-GG
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           7774 4 +     14753 A-A-GG
i Murina_feae.MurFea_scaffold_85699                      I 6 C 0
s Mustela_putorius.JH418006.1                               302429 4 -  14710649 A-A-GG
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     72124 1 -     80779 -----G
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 22 C 0
s Myotis_brandtii.KE162005.1                                281416 4 -  10118263 A-A-GG
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1588671 4 -   6019432 A-A-GG
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3904768 4 -   4330536 A-A-GG
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                         919 4 +      1835 A-A-GG
i Myotis_myotis.MyoMyo_scaffold_281845                   I 117 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190184 4 +    196477 T-A-AG
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2035473 4 -   3037898 a-a-aa
i Nannospalax_galili.KL204047.1                          I 505 C 0
s Nasalis_larvatus.k141_413338                               16164 5 +     21681 T-AAGG
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308466 4 +  31847680 A-A-gg
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    758812 4 +    783361 G-A-GG
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150332 4 -   9404916 A-A-ga
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102587139 5 - 196305487 TAA-GA
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                             1063 5 +      2075 TAA-GA
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105762494 5 + 199412804 TAA-GA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1364747 4 +   3988456 T-G-CA
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              507611 4 -   2017862 A-A-gg
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387              11069 4 -     18566 T-A-gg
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67148251 4 + 174332312 T-G-AG
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       463282 4 -    559221 A-A-ga
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         5048 5 +      8798 TAA-GA
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             697210 5 -   1103335 TAA-GA
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    45116 5 +     80009 T-AAGG
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189144014 5 + 189151597 T-AAGG
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152096 4 +    230217 A-A-GG
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                265305 4 +  18783137 A-A-GG
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4722185 4 -   8748460 A-A-GG
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                183444256 5 + 183742232 T-AAGG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7902 5 +     20448 T-AAGG
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20564714 5 +  20919399 T-AAGG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6646 5 +     41871 T-AAGG
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     9939 5 +     27711 T-AAGG
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                   936 5 -     11374 T-ACGG
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13591 4 -     78924 A-A-GG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           11039 5 +     13100 TAA-GA
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             9433 5 +     25941 TAA-GA
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     29006 4 -     29689 C-A-AA
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Piliocolobus_badius.k141_1234363                           44655 5 +     62158 T-AAGG
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        39402 5 +     89929 T-AAGG
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40818 5 +     51399 T-AAGG
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14297057 5 -  14605196 T-AAGG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2708 4 +     22620 A-A-GG
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pongo_abelii.CM009266.2                                189132159 5 + 189387572 T-AAGG
i Pongo_abelii.CM009266.2                                T 24611 C 0
s Pongo_pygmaeus.ctg66                                     9571766 5 +   9816681 T-AAGG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               74339 5 -     81375 T-AAGG
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              6160 5 +     19060 T-AAGG
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 14287 4 -     22811 C-A-GG
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2597699 5 -   4620579 TAA-GA
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     991681 5 +   2598838 TAA-GA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29993 5 +     38485 TAA-GA
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              2035 5 -     13098 TAA-GA
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          27514 5 +     35766 TAA-GA
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           5701 5 -     24134 TAA-GA
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        29526 5 -     67325 TAA-GA
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           5749 5 -      6182 TAA-GA
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            16102 4 -     21811 G-A-GG
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41233 4 +     42204 A-A-GG
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22977718 4 +  28871421 A-A-GT
i Pteropus_alecto.KB030862.1                             I 1 C 0
s Pteropus_vampyrus.KN534172.1                                7771 4 -      8028 A-A-GT
i Pteropus_vampyrus.KN534172.1                           I 1 C 0
s Puma_concolor.QAVW01001104.1                            20275258 4 -  38429054 C-A-GG
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             16146 5 -     91421 T-AAGG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7610266 5 +   7812017 T-AAGG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             16145 5 -     72585 T-AAGG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        367934 4 -   3329780 A-A-gg
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             7856 5 -     11128 T-AAGG
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91237205 5 - 195417433 T-AAGG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672861 5 +   7961872 T-AAGG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88760 4 -     96226 A-A-GT
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 1 C 0
s Saguinus_bicolor.k141_8081                                  2263 5 +     42994 T-AAGG
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                              958 5 +      2253 T-AAGG
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               1387 5 -      8737 T-AAGG
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                              1040 5 +      2343 T-AAGG
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209475917 5 + 209938924 T-AAGG
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                 363 5 -      7576 T-AAGG
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951986 5 - 121099817 T-AAGG
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24328 5 +     46362 T-AAGG
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               24423 5 +     45824 T-AAGG
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             41102 5 -     64574 T-AAGG
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4175 5 -     23631 T-AAGG
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 24319 5 -     61129 T-AAGG
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5421669 5 -   5703754 T-CAGG
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          56910 5 -     80660 T-CAGG
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154140 4 -    313613 A-A-GG
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                         1037 5 -     12572 T-AAGG
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27887 5 +     39453 T-AAGG
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            8405 5 +     27826 T-AAGG
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             7927 5 -     19483 T-AAGG
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      1228 5 -     12762 T-AAGG
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           1089 5 +     13763 T-AAGG
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               4695 4 +   1910179 A-A-GG
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13651941 4 -  18376816 A-A-GG
i Sorex_araneus.JH798187.1                               I 4 C 0
s Spermophilus_dauricus.KZ294078.1                         1954884 3 -   3870691 --A-AG
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             31694 4 +     97271 A-A-GG
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              19276 4 -    196729 A-A-GG
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                11762 4 +     41958 A-A-GG
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73549 4 +    116680 T-A-GG
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      119718 4 -    156842 A-A-Ag
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    388188 4 +    539355 A-A-Ag
i Tapirus_terrestris.TapTer_scaffold_755                 I 6 C 0
s Theropithecus_gelada.CM009954.1                        186429574 5 + 186847797 T-AAGG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106311 4 +    114563 T-A-AA
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   7310 5 +      8208 TAA-AG
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     82149 4 +    610378 G-A-GG
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         11978 5 -     20410 T-AAGG
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      1092 5 -     12674 T-AAGG
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       12079 5 +     19930 T-AAGG
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       8490 5 -     19997 T-AAGG
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48629 5 -     60166 T-AAGG
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        16101 5 -     27529 T-AAGG
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     16045 5 -     18194 T-AAGG
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9757 5 -     21137 T-AAGG
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    8460 5 -     10723 T-AAGG
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7632 5 +      9834 T-AAGG
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        25945 5 +     32220 T-AAGG
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5940047 5 +   6242583 T-AAGG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        9298 5 +     20839 T-AAGG
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4294207 4 +  10818551 G-A-GG
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2156725 3 +   4065304 --T-AG
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                    10170 4 -     10553 G-T-TG
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54237 4 -     77625 A-A-GG
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4851382 4 -   5085361 A-A-GA
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  12358 5 +     50397 TAA-GA
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             12417 5 +     24756 TAA-GA
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 11730 4 -     43706 A-A-ga
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          2017 3 +    224448 --A-AG
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 3
s Zapus_hudsonius.ZapHud_scaffold_11398                      15810 4 +     63895 A-A-AG
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Mus_pahari.LT608297.1                                   31355930 6 -  89631738 I
e Mus_spretus.CM004101.1                                  90753339 6 - 130317789 I
e Mus_musculus.chr8                                       87651276 6 - 129401213 I
e Mus_caroli.LT608237.1                                   84362283 6 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_3601914            168 1 +       295 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vicugna_pacos.KN270157.1                                 5372720 1 -   5488506 I
e Tursiops_truncatus.MRVK01000835.1                       15738821 1 +  33153633 I
e Tragulus_javanicus.TraJav_scaffold_40725                     572 1 +     27266 I
e Tarsius_wallacei.k141_254427                                1877 3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080 3 +     70052 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sus_scrofa.JH118708.1                                      37347 1 -     47482 I
e Sigmodon_hispidus.SigHis_scaffold_42075                     1222 6 -     30804 I
e Rattus_norvegicus.chr16                                 53571529 6 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  6214 1 +     55207 I
e Psammomys_obesus.NESX01036370.1                            11313 6 -     21651 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35316 1 +     35617 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9615 1 +     63832 I
e Peromyscus_maniculatus.KI615324.1                       18195689 6 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265632 1 -   2937107 I
e Ovis_canadensis.OviCan_scaffold_2572                      174714 1 -    191736 I
e Ovis_aries.CM001607.2                                   17586737 1 +  44047080 I
e Orcinus_orca.KB316932.1                                  2782576 1 -  10937097 I
e Onychomys_torridus.OnyTor_scaffold_2986                    81109 7 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   26073 6 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77471 1 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866653 1 +   7148211 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1639 1 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27696 1 -    437263 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             35221 4 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1851541 4 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11261424 6 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    4190 1 +     10310 I
e Mesocricetus_auratus.KB708134.1                         12183131 6 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 33667 6 +    140813 I
e Lipotes_vexillifer.KE559953.1                             268573 1 -    662738 I
e Kogia_breviceps.KogBre_flattened_line_192630                2879 1 -      3359 I
e Inia_geoffrensis.IniGeo_flattened_line_48101               23522 1 +     23964 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18762 1 +     36099 I
e Glis_glis.GliGli_scaffold_19807                            32063 0 +     49224 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609558 1 -    660261 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25918 1 -     44125 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           11981 1 +    133382 I
e Ellobius_talpinus.LOJH01081419.1                            1345 6 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          21439 6 -    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       311594 1 +    607251 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812307 1 +  35494412 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cricetulus_griseus.LT883664.1                           11668469 6 + 224834208 I
e Cephalopachus_bancanus.k141_1423433                         6085 3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     94488 1 +    217609 I
e Carlito_syrichta.NW_007259797.1                           156587 3 -    496798 I
e Capra_hircus.CM004588.1                                 18061277 1 -  44709034 I
e Capra_aegagrus.CM003241.1                               18830557 1 +  46296322 I
e Camelus_ferus.KB017975.1                                  403969 1 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2335670 1 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10003194 1 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2819929 1 +   4408762 I
e Bos_taurus.CM000184.6                                   18200297 1 - 114055384 I
e Bos_mutus.JH880303.1                                     1126179 1 -   1948126 I
e Bos_indicus.CM003028.1                                  18363323 1 - 116941312 I
e Bison_bison.KN261452.1                                    200419 1 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    27361 1 +     34529 I
e Balaenoptera_bonaerensis.DF707048.1                         3134 1 -     18090 I
e Balaenoptera_acutorostrata.KI537508.1                   15192669 1 +  23207421 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98920 1 -    100397 I
e Ammotragus_lervia.NIVO01071767.1                          676439 1 -   2318259 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     71718 6 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       7778 1 +     62944 A
s Acinonyx_jubatus.LLWD01001279.1                           828254 1 -   1699592 A
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 3
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511539 1 -  29979442 A
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 3
s Ailurus_fulgens.LNAC01001112.1                             80277 1 -    347723 A
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 3
s Allactaga_bullata.AllBul_scaffold_9566                     75425 1 -     89534 A
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 3
s Allenopithecus_nigroviridis.k141_3361533                   15704 1 -     52922 A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15624 1 -     28001 A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          6122 1 -     18505 A
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           6974 1 -     12518 A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              8549 1 +     51355 G
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                1658 1 -     36483 A
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              12110 1 +     28687 A
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                  623 1 +     27940 A
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            1667 1 -      9457 A
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                              623 1 +     30492 A
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              4618 1 +     47717 A
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              1350 1 +      5663 A
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             15802 1 +     50774 A
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      186309 1 +    412891 A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 3
s Aotus_azarae.k141_3104676                                  16791 1 -     33861 A
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            16788 1 -     34016 A
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299215 1 -   5030052 A
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             16824 1 -     34685 A
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               29949 1 -     47192 A
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13554 1 +     20879 A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 3
s Arctocebus_calabarensis.k141_2318572                       12235 1 +     14667 A
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5691 1 +     43469 A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 3
s Avahi_laniger.k141_765380                                  54643 1 -     92717 A
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              55274 1 +     85213 A
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Callibella_humilis.k141_1278103                             6675 1 -     10423 A
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_737284                                220 1 -     31217 A
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                              514 1 +      5377 A
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592375 1 - 189096842 A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1189 1 -     12329 A
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s CanFam4.chr16                                           17800115 1 -  60362399 a
i CanFam4.chr16                                          C 0 I 3
s Canis_lupus_VD.CanFam_VD_scaffold_27089                      863 1 -     43241 a
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 I 3
s Canis_lupus_dingo.QKWQ01000480.1                         9035558 1 -   9314153 a
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 3
s Canis_lupus_familiaris.chr16                            17960034 1 -  59632846 a
i Canis_lupus_familiaris.chr16                           C 0 I 3
s Canis_lupus_orion.HG994398.1                            18501331 1 +  63665305 a
i Canis_lupus_orion.HG994398.1                           C 0 I 3
s Capromys_pilorides.CapPil_scaffold_65020                    1943 1 -     12242 A
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 3
s Carollia_perspicillata.CarPer_scaffold_92756                6060 1 -     11696 A
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 3
s Castor_canadensis.CasCan_scaffold_2074                    138238 1 +    179628 a
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 3
s Cebuella_niveiventris.k141_1251222                         11115 1 -     11392 A
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               7299 1 -      7577 A
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25653720 1 +  26074798 A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                1658 1 +     28840 A
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 1387 1 +     14051 A
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Ceratotherium_simum.JH767749.1                          12232416 1 +  27778364 A
i Ceratotherium_simum.JH767749.1                         C 0 I 3
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3443 1 -     25243 A
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 I 3
s Cercocebus_atys.KQ010504.1                               4476641 1 +   4669795 A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        1143 1 +     17872 A
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           1800 1 -     14043 A
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9833 1 +     27781 A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        10001 1 -     20310 A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          12981 1 +     29689 A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7727 1 -     20078 A
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          15649 1 -     27936 A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            4515 1 -     17152 A
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38818060 1 +  39242232 A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223749 1 -  21565898 A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40868 1 -     53127 A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        1119 1 +     13442 A
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15668 1 -     27947 A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         15644 1 +     17596 A
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          1687 1 +     14005 A
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1425 1 -      8501 A
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 I 3
s Cheirogaleus_major.k141_333249                             22022 1 -     52598 A
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           17393 1 +     57038 A
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1253818 1 +   2543920 A
i Chinchilla_lanigera.JH722012.1                         C 0 I 3
s Chiropotes_albinasus.k141_2206961                           2003 1 -     15524 A
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18429626 1 -  18827391 A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       16062 1 -     50209 A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135423063 1 + 135778131 A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 19246 1 +     19366 a
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 I 3
s Choloepus_hoffmanni.KN194906.1                            174320 1 +    839153 A
i Choloepus_hoffmanni.KN194906.1                         C 0 I 3
s Colobus_angolensis.KN981557.1                            1911541 1 +   2368649 A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949793 1 + 200372422 A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              38075 1 +     84244 A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17548992 1 -  53390261 A
i Condylura_cristata.JH655891.1                          C 0 I 3
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1419 1 +     23735 A
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 I 3
s Cricetomys_gambianus.CriGam_scaffold_18520                 50961 1 +     63868 A
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 3
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29436 1 -     87169 A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 3
s Ctenodactylus_gundi.CteGun_scaffold_65                    838010 1 +   1526836 A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 3
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  36812 1 +     51376 A
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 3
s Dasypus_novemcinctus.JH564415.1                            64442 1 +   2246927 A
i Dasypus_novemcinctus.JH564415.1                        C 0 I 3
s Daubentonia_madagascariensis.ctg71                      12538225 1 -  12879189 A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8631057 1 +  20541912 A
i Desmodus_rotundus.KZ672289.1                           C 0 I 3
s Dicerorhinus_sumatrensis.PEKH010002091.1                  674264 1 +   1390856 a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 3
s Diceros_bicornis.DicBicMic_scaffold_5955                    7016 1 +    198055 A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 3
s Dinomys_branickii.DinBra_scaffold_21862                    37294 1 +     67921 A
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 3
s Echinops_telfairi.JH980293.1                            48781709 1 + 111700974 A
i Echinops_telfairi.JH980293.1                           C 0 I 3
s Eidolon_helvum.KE759718.1                                  11488 1 +     11740 A
i Eidolon_helvum.KE759718.1                              C 0 I 3
s Elephantulus_edwardii.JH947257.1                         1098674 1 +  10337057 A
i Elephantulus_edwardii.JH947257.1                       C 0 I 3
s Enhydra_lutris.KZ291758.1                               16330282 1 -  41312741 A
i Enhydra_lutris.KZ291758.1                              C 0 I 3
s Eptesicus_fuscus.JH977646.1                              2146675 1 -  14770903 A
i Eptesicus_fuscus.JH977646.1                            C 0 I 3
s Equus_asinus.JREZ01000139.1                              1284521 1 +   4378816 a
i Equus_asinus.JREZ01000139.1                            C 0 I 3
s Equus_caballus.CM000403.2                               18532341 1 -  39960074 A
i Equus_caballus.CM000403.2                              C 0 I 3
s Equus_przewalskii.KK951119.1                               34370 1 +    498745 A
i Equus_przewalskii.KK951119.1                           C 0 I 3
s Erinaceus_europaeus.JH835339.1                           3329205 1 -   7059049 A
i Erinaceus_europaeus.JH835339.1                         C 0 I 3
s Erythrocebus_patas.Contig38                             21206231 1 -  21539334 A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_576796                              41071 1 -     44621 A
i Eulemur_albifrons.k141_576796                          C 0 C 0
s Eulemur_collaris.k141_377015                                7452 1 -     16928 A
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              16484 1 -     25546 A
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            13680 1 +     26330 A
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14915 1 +     23973 A
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                13677 1 +     75513 A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 11607 1 +     97555 A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                             1099 1 +     13026 A
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  5151 1 -     17153 A
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              14724 1 +    111500 A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237896 1 + 206538554 A
i Felis_catus.CM001381.2                                 C 0 I 3
s Felis_catus_fca126.CM031415.1                           20196739 1 + 205367284 A
i Felis_catus_fca126.CM031415.1                          C 0 I 3
s Felis_nigripes.FelNig_flattened_line_20823                 10493 1 -     36744 A
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 3
s Fukomys_damarensis.KN121974.1                             851349 1 +   3816255 A
i Fukomys_damarensis.KN121974.1                          C 0 I 3
s Galago_moholi.ctg2040                                     427538 1 -    453645 A
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             5228 1 +     11339 A
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            2526 1 +     41679 A
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               2136 1 -      9135 A
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 I 3
s Gorilla_beringei.k141_3596273                              17033 1 -     32273 A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186339169 1 + 186649187 A
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33553 1 +     78134 A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 3
s Hapalemur_alaotrensis.k141_170648                           7779 1 -     19426 A
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12932 1 -     15286 A
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             14571 1 +     18253 A
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         14672 1 -     41752 A
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         14509 1 -     16460 A
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243275 1 +    327341 A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 3
s Heterocephalus_glaber.JH602082.1                        20663105 1 +  22651954 A
i Heterocephalus_glaber.JH602082.1                       C 0 I 3
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1836 1 +      7595 A
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 I 3
s Hipposideros_armiger.JXIK01000431.1                       111451 1 +   1711038 A
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 3
s Hipposideros_galeritus.HipGal_scaffold_29171               42881 1 +     43066 A
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 I 3
s Hoolock_leuconedys.ctg274                                    435834 1 +    630532 A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45981 1 +     55795 A
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 3
s Hystrix_cristata.HysCri_scaffold_5660                      83999 1 +    135385 A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 3
s Ictidomys_tridecemlineatus.JH393364.1                    7521834 1 -   7955117 A
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 3
s Indri_indri.k141_3655594                                   23466 1 +     31101 A
i Indri_indri.k141_3655594                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               8278086 1 -   9596543 A
i Jaculus_jaculus.JH725527.1                             C 0 I 3
s Lasiurus_borealis.LasBor_scaffold_32767                    17333 1 -     42476 A
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 3
s Lemur_catta.scaffold_24                                 15525024 1 -  30322482 A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        8954 1 +     64341 A
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           1294 1 -     35062 A
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        8981 1 +     35603 A
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    30594 1 +     38576 A
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         27298 1 +     66356 A
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         11914 1 -     23766 A
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29968 1 +     45836 A
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          2513 1 +     25010 A
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27908 1 +     54090 A
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3044010 1 +   3914936 a
i Leptonychotes_weddellii.KB714746.1                     C 0 I 3
s Lepus_americanus.LepAme_scaffold_107385                     7396 1 -     14121 A
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 3
s Lophocebus_aterrimus.ctg367                              1438184 1 +   1826925 A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_399337                            15904 1 -     33856 a
i Loris_lydekkerianus.k141_399337                        N 0 C 0
s Loris_tardigradus.ctg83                                  1013615 1 +   6120653 a
i Loris_tardigradus.ctg83                                I 8016 C 0
s Loxodonta_africana.GL010049.1                            4218306 1 -  43346337 A
i Loxodonta_africana.GL010049.1                          C 0 I 3
s Lycaon_pictus.CM007581.1                                17956274 1 -  59628241 a
i Lycaon_pictus.CM007581.1                               C 0 I 3
s Macaca_arctoides.k141_2326796                               7999 1 +     40492 A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59677258 1 +  60120075 A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13774 1 -     26193 A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            81558 1 -    114318 A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  7245 1 -     23192 A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16718 1 -     29190 A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  25283 1 +     37952 A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186840372 1 + 187317192 A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458935 1 -  25927173 A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  81131 1 +     89720 A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 8132 1 +     20474 A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   7932 1 -     14993 A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  330798 1 -    668171 A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 6245 1 -     24072 A
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26870 1 -     45290 A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91582 1 +     94391 A
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 2
s Mandrillus_leucophaeus.scaffold280                      23938461 1 -  24302211 A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352583 1 +    752769 A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              19202 1 +    737560 A
i Manis_javanica.JSZB01003497.1                          C 0 I 3
s Manis_pentadactyla.KN006162.1                              51188 1 -    317179 A
i Manis_pentadactyla.KN006162.1                          C 0 I 3
s Marmota_marmota.CZRN01000018.1                          33104029 1 -  40650429 A
i Marmota_marmota.CZRN01000018.1                         C 0 I 3
s Megaderma_lyra.MegLyr_scaffold_4542                        14299 1 -    207569 A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 3
s Mellivora_capensis.MelCap_flattened_line_69365             11022 1 +     13704 A
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 3
s Mico_argentatus.k141_1239457                                7111 1 -      7380 A
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_schneideri.k141_1950671                                      7084 1 -      7356 A
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18292466 1 -  93316391 A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    23616 1 -    145209 A
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 813
s Micronycteris_hirsuta.MicHir_scaffold_52381                16597 1 -     19307 A
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 3
s Miopithecus_ogouensis.k141_534055                          10165 1 -     28506 A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6877 1 -      8324 A
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 3
s Mirza_zaza.k141_952172                                     10010 1 -     37649 A
i Mirza_zaza.k141_952172                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142598 1 -    366855 A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 3
s Mungos_mungo.MunMun_flattened_line_23663                   36376 1 +     37127 A
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 3
s Murina_feae.MurFea_scaffold_85699                           7778 1 +     14753 A
i Murina_feae.MurFea_scaffold_85699                      C 0 I 3
s Mustela_putorius.JH418006.1                               302433 1 -  14710649 C
i Mustela_putorius.JH418006.1                            C 0 I 3
s Myocastor_coypus.MyoCoy_scaffold_10123                     72125 1 -     80779 A
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 I 3
s Myotis_brandtii.KE162005.1                                281420 1 -  10118263 A
i Myotis_brandtii.KE162005.1                             C 0 I 3
s Myotis_davidii.KB100139.1                                1588675 1 -   6019432 A
i Myotis_davidii.KB100139.1                              C 0 I 3
s Myotis_lucifugus.GL429869.1                              3904772 1 -   4330536 A
i Myotis_lucifugus.GL429869.1                            C 0 I 3
s Myotis_myotis.MyoMyo_scaffold_281845                         923 1 +      1835 A
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 I 3
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190188 1 +    196477 A
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 I 3
s Nannospalax_galili.KL204047.1                            2035477 1 -   3037898 a
i Nannospalax_galili.KL204047.1                          C 0 I 3
s Nasalis_larvatus.k141_413338                               16169 1 +     21681 A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308470 1 +  31847680 a
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 3
s Noctilio_leporinus.NocLep_scaffold_251                    758816 1 +    783361 A
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 3
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150336 1 -   9404916 a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 3
s Nycticebus_bengalensis.LG01                            102587144 1 - 196305487 A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                             1068 1 +      2075 A
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105762499 1 + 199412804 A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1364751 1 +   3988456 A
i Ochotona_princeps.JH802162.1                           C 0 I 3
s Odobenus_rosmarus.KB229312.1                              507615 1 -   2017862 a
i Odobenus_rosmarus.KB229312.1                           C 0 I 3
s Orycteropus_afer.OryAfe_flattened_line_144387              11073 1 -     18566 a
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 I 3
s Oryctolagus_cuniculus.CM000791.1                        67148255 1 + 174332312 A
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 3
s Otocyon_megalotis.JAEUCK010005147.1                       463286 1 -    559221 a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 3
s Otolemur_crassicaudatus.k141_222918                         5053 1 +      8798 A
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             697215 1 -   1103335 A
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    45121 1 +     80009 A
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189144019 1 + 189151597 A
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152100 1 +    230217 A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 3
s Panthera_pardus.KV860321.1                                265309 1 +  18783137 A
i Panthera_pardus.KV860321.1                             C 0 I 3
s Panthera_tigris.KE722367.1                               4722189 1 -   8748460 A
i Panthera_tigris.KE722367.1                             C 0 I 3
s Papio_anubis.CM001495.2                                183444261 1 + 183742232 A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7907 1 +     20448 A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20564719 1 +  20919399 A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6651 1 +     41871 A
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     9944 1 +     27711 A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                   941 1 -     11374 A
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13595 1 -     78924 A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 3
s Perodicticus_ibeanus.k141_855320                           11044 1 +     13100 A
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             9438 1 +     25941 A
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     29010 1 -     29689 A
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 I 3
s Piliocolobus_badius.k141_1234363                           44660 1 +     62158 A
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        39407 1 +     89929 A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40823 1 +     51399 A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14297062 1 -  14605196 A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2712 1 +     22620 A
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 3
s Pongo_abelii.CM009266.2                                189132164 1 + 189387572 A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9571771 1 +   9816681 A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               74344 1 -     81375 A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              6165 1 +     19060 A
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 14291 1 -     22811 A
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 I 3
s Prolemur_simus.MPIZ01000396.1                            2597704 1 -   4620579 A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     991686 1 +   2598838 A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29998 1 +     38485 A
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              2040 1 -     13098 A
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          27519 1 +     35766 A
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           5706 1 -     24134 A
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        29531 1 -     67325 A
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           5754 1 -      6182 A
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            16106 1 -     21811 G
i Pteronotus_parnellii.KE909381.1                        C 0 I 3
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41237 1 +     42204 A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 3
s Pteropus_alecto.KB030862.1                              22977722 1 +  28871421 A
i Pteropus_alecto.KB030862.1                             C 0 I 3
s Pteropus_vampyrus.KN534172.1                                7775 1 -      8028 A
i Pteropus_vampyrus.KN534172.1                           C 0 I 3
s Puma_concolor.QAVW01001104.1                            20275262 1 -  38429054 A
i Puma_concolor.QAVW01001104.1                           C 0 I 3
s Pygathrix_cinerea.k141_1153803                             16151 1 -     91421 A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7610271 1 +   7812017 A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             16150 1 -     72585 A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        367938 1 -   3329780 a
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 3
s Rhinopithecus_bieti.k119_217274                             7861 1 -     11128 A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91237210 1 - 195417433 A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672866 1 +   7961872 A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88764 1 -     96226 A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 3
s Saguinus_bicolor.k141_8081                                  2268 1 +     42994 A
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                              963 1 +      2253 A
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               1392 1 -      8737 A
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                              1045 1 +      2343 A
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209475922 1 + 209938924 A
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                 368 1 -      7576 A
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951991 1 - 121099817 A
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24333 1 +     46362 A
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               24428 1 +     45824 A
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             41107 1 -     64574 A
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4180 1 -     23631 A
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 24324 1 -     61129 A
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5421674 1 -   5703754 A
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          56915 1 -     80660 A
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154144 1 -    313613 A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 3
s Semnopithecus_entellus.k141_1672505                         1042 1 -     12572 A
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27892 1 +     39453 A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            8410 1 +     27826 A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             7932 1 -     19483 A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      1233 1 -     12762 A
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           1094 1 +     13763 A
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               4699 1 +   1910179 A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 3
s Sorex_araneus.JH798187.1                                13651945 1 -  18376816 A
i Sorex_araneus.JH798187.1                               C 0 I 3
s Spermophilus_dauricus.KZ294078.1                         1954887 1 -   3870691 A
i Spermophilus_dauricus.KZ294078.1                       C 0 I 3
s Spilogale_gracilis.SpiGra_flattened_line_13525             31698 1 +     97271 A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 3
s Suricata_suricatta.SurSur_flattened_line_6629              19280 1 -    196729 A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 3
s Tadarida_brasiliensis.TadBra_scaffold_25820                11766 1 +     41958 A
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 3
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73553 1 +    116680 A
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 I 3
s Tapirus_indicus.TapInd_scaffold_9301                      119722 1 -    156842 a
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 3
s Tapirus_terrestris.TapTer_scaffold_755                    388192 1 +    539355 a
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 3
s Theropithecus_gelada.CM009954.1                        186429579 1 + 186847797 A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106315 1 +    114563 A
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 3
s Tolypeutes_matacus.TolMat_scaffold_228639                   7315 1 +      8208 A
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 I 3
s Tonatia_saurophila.TonSau_scaffold_294                     82153 1 +    610378 A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 3
s Trachypithecus_auratus.k141_722599                         11983 1 -     20410 A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      1097 1 -     12674 A
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       12084 1 +     19930 A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       8495 1 -     19997 A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48634 1 -     60166 A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        16106 1 -     27529 A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     16050 1 -     18194 A
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9762 1 -     21137 A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    8465 1 -     10723 A
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7637 1 +      9834 A
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        25950 1 +     32220 A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5940052 1 +   6242583 A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        9303 1 +     20839 A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Trichechus_manatus.JH594705.1                            4294211 1 +  10818551 A
i Trichechus_manatus.JH594705.1                          C 0 I 3
s Tupaia_chinensis.KB320699.1                              2156728 1 +   4065304 A
i Tupaia_chinensis.KB320699.1                            C 0 I 3
s Tupaia_tana.TupTan_flattened_line_97126                    10174 1 -     10553 A
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 3
s Uropsilus_gracilis.UroGra_scaffold_12083                   54241 1 -     77625 A
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 3
s Ursus_maritimus.KK499267.1                               4851386 1 -   5085361 A
i Ursus_maritimus.KK499267.1                             C 0 I 3
s Varecia_rubra.k141_590885                                  12363 1 +     50397 A
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             12422 1 +     24756 A
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 11734 1 -     43706 a
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 3
s Zapus_hudsonius.ZapHud_scaffold_11398                      15814 1 +     63895 A
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 3
e Mus_pahari.LT608297.1                                   31355930 6 -  89631738 I
e Mus_spretus.CM004101.1                                  90753339 6 - 130317789 I
e Mus_musculus.chr8                                       87651276 6 - 129401213 I
e Mus_caroli.LT608237.1                                   84362283 6 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_3601914            168 1 +       295 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Xerus_inauris.XerIna_scaffold_2302                          2020 3 +    224448 I
e Vicugna_pacos.KN270157.1                                 5372720 1 -   5488506 I
e Tursiops_truncatus.MRVK01000835.1                       15738821 1 +  33153633 I
e Tragulus_javanicus.TraJav_scaffold_40725                     572 1 +     27266 I
e Tarsius_wallacei.k141_254427                                1877 3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080 3 +     70052 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sus_scrofa.JH118708.1                                      37347 1 -     47482 I
e Sigmodon_hispidus.SigHis_scaffold_42075                     1222 6 -     30804 I
e Rattus_norvegicus.chr16                                 53571529 6 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  6214 1 +     55207 I
e Psammomys_obesus.NESX01036370.1                            11313 6 -     21651 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35316 1 +     35617 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9615 1 +     63832 I
e Peromyscus_maniculatus.KI615324.1                       18195689 6 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1265632 1 -   2937107 I
e Ovis_canadensis.OviCan_scaffold_2572                      174714 1 -    191736 I
e Ovis_aries.CM001607.2                                   17586737 1 +  44047080 I
e Orcinus_orca.KB316932.1                                  2782576 1 -  10937097 I
e Onychomys_torridus.OnyTor_scaffold_2986                    81109 7 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   26073 6 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77471 1 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866653 1 +   7148211 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1639 1 +     82753 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27696 1 -    437263 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             35221 4 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1851541 4 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11261424 6 -  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    4190 1 +     10310 I
e Mesocricetus_auratus.KB708134.1                         12183131 6 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 33667 6 +    140813 I
e Lipotes_vexillifer.KE559953.1                             268573 1 -    662738 I
e Kogia_breviceps.KogBre_flattened_line_192630                2879 1 -      3359 I
e Inia_geoffrensis.IniGeo_flattened_line_48101               23522 1 +     23964 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18762 1 +     36099 I
e Glis_glis.GliGli_scaffold_19807                            32063 0 +     49224 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609558 1 -    660261 I
e Eubalaena_japonica.EubJap_flattened_line_31514             25918 1 -     44125 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           11981 1 +    133382 I
e Ellobius_talpinus.LOJH01081419.1                            1345 6 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          21439 6 -    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       311594 1 +    607251 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Delphinapterus_leucas.KZ290073.1                        16812307 1 +  35494412 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Crocidura_indochinensis.CroInd_scaffold_37019               3895 0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11668469 6 + 224834208 I
e Cephalopachus_bancanus.k141_1423433                         6085 3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     94488 1 +    217609 I
e Carlito_syrichta.NW_007259797.1                           156587 3 -    496798 I
e Capra_hircus.CM004588.1                                 18061277 1 -  44709034 I
e Capra_aegagrus.CM003241.1                               18830557 1 +  46296322 I
e Camelus_ferus.KB017975.1                                  403969 1 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2335670 1 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10003194 1 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2819929 1 +   4408762 I
e Bos_taurus.CM000184.6                                   18200297 1 - 114055384 I
e Bos_mutus.JH880303.1                                     1126179 1 -   1948126 I
e Bos_indicus.CM003028.1                                  18363323 1 - 116941312 I
e Bison_bison.KN261452.1                                    200419 1 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    27361 1 +     34529 I
e Balaenoptera_bonaerensis.DF707048.1                         3134 1 -     18090 I
e Balaenoptera_acutorostrata.KI537508.1                   15192669 1 +  23207421 I
e Antilocapra_americana.AntAmePen_scaffold_12469             98920 1 -    100397 I
e Ammotragus_lervia.NIVO01071767.1                          676439 1 -   2318259 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     71718 6 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       7779 2 +     62944 TG
s Acinonyx_jubatus.LLWD01001279.1                           828258 2 -   1699592 TC
i Acinonyx_jubatus.LLWD01001279.1                        I 3 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511543 2 -  29979442 TC
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 3 C 0
s Ailurus_fulgens.LNAC01001112.1                             80281 2 -    347723 tc
i Ailurus_fulgens.LNAC01001112.1                         I 3 I 322
s Allactaga_bullata.AllBul_scaffold_9566                     75429 2 -     89534 AC
i Allactaga_bullata.AllBul_scaffold_9566                 I 3 C 0
s Allenopithecus_nigroviridis.k141_3361533                   15705 2 -     52922 TG
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15625 2 -     28001 TG
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          6123 2 -     18505 TG
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           6975 2 -     12518 TG
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              8550 2 +     51355 TG
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                1659 2 -     36483 TG
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              12111 2 +     28687 TG
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                  624 2 +     27940 TG
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            1668 2 -      9457 TG
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                              624 2 +     30492 TG
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              4619 2 +     47717 TG
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              1351 2 +      5663 TG
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             15803 2 +     50774 TG
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          676440 2 -   2318259 CT
i Ammotragus_lervia.NIVO01071767.1                       I 1 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      186313 2 +    412891 TC
i Anoura_caudifer.AnoCau_scaffold_1412                   I 3 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             98921 2 -    100397 TT
i Antilocapra_americana.AntAmePen_scaffold_12469         I 1 C 0
s Aotus_azarae.k141_3104676                                  16792 2 -     33861 TG
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            16789 2 -     34016 TG
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299216 2 -   5030052 TG
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             16825 2 -     34685 TG
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               29950 2 -     47192 TG
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13558 2 +     20879 AC
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 3 C 0
s Arctocebus_calabarensis.k141_2318572                       12236 2 +     14667 TG
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5695 2 +     43469 TC
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 3 C 0
s Avahi_laniger.k141_765380                                  54644 2 -     92717 CA
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              55275 2 +     85213 CA
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15192670 2 +  23207421 TC
i Balaenoptera_acutorostrata.KI537508.1                  I 1 C 0
s Balaenoptera_bonaerensis.DF707048.1                         3135 2 -     18090 TC
i Balaenoptera_bonaerensis.DF707048.1                    I 1 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    27362 2 +     34529 CT
i Beatragus_hunteri.BeaHun_scaffold_50177                I 1 C 0
s Bison_bison.KN261452.1                                    200420 2 -    288883 CT
i Bison_bison.KN261452.1                                 I 1 C 0
s Bos_indicus.CM003028.1                                  18363324 2 - 116941312 CT
i Bos_indicus.CM003028.1                                 I 1 C 0
s Bos_mutus.JH880303.1                                     1126180 2 -   1948126 CT
i Bos_mutus.JH880303.1                                   I 1 C 0
s Bos_taurus.CM000184.6                                   18200298 2 - 114055384 CT
i Bos_taurus.CM000184.6                                  I 1 C 0
s Bubalus_bubalis.KI419123.1                               2819930 2 +   4408762 CT
i Bubalus_bubalis.KI419123.1                             I 1 C 0
s Callibella_humilis.k141_1278103                             6676 2 -     10423 TG
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_737284                                221 2 -     31217 TG
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                              515 2 +      5377 TG
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592376 2 - 189096842 TG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1190 2 -     12329 TG
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10003195 2 -  17673402 TC
i Camelus_bactrianus.KN276810.1                          I 1 C 0
s Camelus_dromedarius.KN272107.1                           2335671 2 -   7040546 TC
i Camelus_dromedarius.KN272107.1                         I 1 C 0
s Camelus_ferus.KB017975.1                                  403970 2 -   1652518 TC
i Camelus_ferus.KB017975.1                               I 1 C 0
s CanFam4.chr16                                           17800119 2 -  60362399 tc
i CanFam4.chr16                                          I 3 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                      867 2 -     43241 tc
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 3 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9035562 2 -   9314153 tc
i Canis_lupus_dingo.QKWQ01000480.1                       I 3 C 0
s Canis_lupus_familiaris.chr16                            17960038 2 -  59632846 tc
i Canis_lupus_familiaris.chr16                           I 3 C 0
s Canis_lupus_orion.HG994398.1                            18501335 2 +  63665305 tc
i Canis_lupus_orion.HG994398.1                           I 3 C 0
s Capra_aegagrus.CM003241.1                               18830558 2 +  46296322 CT
i Capra_aegagrus.CM003241.1                              I 1 C 0
s Capra_hircus.CM004588.1                                 18061278 2 -  44709034 CT
i Capra_hircus.CM004588.1                                I 1 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1947 2 -     12242 GC
i Capromys_pilorides.CapPil_scaffold_65020               I 3 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6064 2 -     11696 TC
i Carollia_perspicillata.CarPer_scaffold_92756           I 3 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138242 2 +    179628 tc
i Castor_canadensis.CasCan_scaffold_2074                 I 3 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     94489 2 +    217609 TC
i Catagonus_wagneri.CatWag_scaffold_2839                 I 1 C 0
s Cebuella_niveiventris.k141_1251222                         11116 2 -     11392 TG
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               7300 2 -      7577 TG
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25653721 2 +  26074798 TG
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                1659 2 +     28840 TG
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 1388 2 +     14051 TG
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Ceratotherium_simum.JH767749.1                          12232420 2 +  27778364 TC
i Ceratotherium_simum.JH767749.1                         I 3 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3447 2 -     25243 TC
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 3 C 0
s Cercocebus_atys.KQ010504.1                               4476642 2 +   4669795 TG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        1144 2 +     17872 TG
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           1801 2 -     14043 TG
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9834 2 +     27781 TG
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        10002 2 -     20310 TG
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          12982 2 +     29689 TG
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7728 2 -     20078 TG
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          15650 2 -     27936 TG
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            4516 2 -     17152 TG
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38818061 2 +  39242232 TG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223750 2 -  21565898 TG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40869 2 -     53127 TG
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        1120 2 +     13442 TG
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15669 2 -     27947 TG
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         15645 2 +     17596 TG
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          1688 2 +     14005 TG
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1429 2 -      8501 TT
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       I 3 C 0
s Cheirogaleus_major.k141_333249                             22023 2 -     52598 TG
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           17394 2 +     57038 TG
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1253822 2 +   2543920 GG
i Chinchilla_lanigera.JH722012.1                         I 3 C 0
s Chiropotes_albinasus.k141_2206961                           2004 2 -     15524 TG
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18429627 2 -  18827391 TG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       16063 2 -     50209 TG
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135423064 2 + 135778131 TG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 19250 2 +     19366 tt
i Choloepus_didactylus.ChoDid_scaffold_45914             I 3 C 0
s Choloepus_hoffmanni.KN194906.1                            174324 2 +    839153 TT
i Choloepus_hoffmanni.KN194906.1                         I 3 C 0
s Colobus_angolensis.KN981557.1                            1911542 2 +   2368649 TG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949794 2 + 200372422 TG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              38076 2 +     84244 TG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17548996 2 -  53390261 CC
i Condylura_cristata.JH655891.1                          I 3 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1423 2 +     23735 TT
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      I 3 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 50965 2 +     63868 TC
i Cricetomys_gambianus.CriGam_scaffold_18520             I 3 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               3895 2 -     19598 TA
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29440 2 -     87169 TC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 3 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    838014 2 +   1526836 GC
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 3 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  36816 2 +     51376 GC
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 3 C 0
s Dasypus_novemcinctus.JH564415.1                            64446 2 +   2246927 CT
i Dasypus_novemcinctus.JH564415.1                        I 3 C 0
s Daubentonia_madagascariensis.ctg71                      12538226 2 -  12879189 AG
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16812308 2 +  35494412 TC
i Delphinapterus_leucas.KZ290073.1                       I 1 C 0
s Desmodus_rotundus.KZ672289.1                             8631061 2 +  20541912 TC
i Desmodus_rotundus.KZ672289.1                           I 3 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  674268 2 +   1390856 tc
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 3 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    7020 2 +    198055 TC
i Diceros_bicornis.DicBicMic_scaffold_5955               I 3 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37298 2 +     67921 AC
i Dinomys_branickii.DinBra_scaffold_21862                I 3 C 0
s Echinops_telfairi.JH980293.1                            48781713 2 + 111700974 TT
i Echinops_telfairi.JH980293.1                           I 3 C 0
s Eidolon_helvum.KE759718.1                                  11492 2 +     11740 TT
i Eidolon_helvum.KE759718.1                              I 3 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       311595 2 +    607251 TT
i Elaphurus_davidianus.JRFZ01104969.1                    I 1 C 0
s Elephantulus_edwardii.JH947257.1                         1098678 2 +  10337057 TA
i Elephantulus_edwardii.JH947257.1                       I 3 C 0
s Enhydra_lutris.KZ291758.1                               16330286 2 -  41312741 tc
i Enhydra_lutris.KZ291758.1                              I 3 I 268
s Eptesicus_fuscus.JH977646.1                              2146679 2 -  14770903 TC
i Eptesicus_fuscus.JH977646.1                            I 3 C 0
s Equus_asinus.JREZ01000139.1                              1284525 2 +   4378816 cc
i Equus_asinus.JREZ01000139.1                            I 3 C 0
s Equus_caballus.CM000403.2                               18532345 2 -  39960074 CC
i Equus_caballus.CM000403.2                              I 3 C 0
s Equus_przewalskii.KK951119.1                               34374 2 +    498745 CC
i Equus_przewalskii.KK951119.1                           I 3 C 0
s Erinaceus_europaeus.JH835339.1                           3329209 2 -   7059049 TC
i Erinaceus_europaeus.JH835339.1                         I 3 C 0
s Erythrocebus_patas.Contig38                             21206232 2 -  21539334 TG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11982 2 +    133382 TC
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 1 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             25919 2 -     44125 TC
i Eubalaena_japonica.EubJap_flattened_line_31514         I 1 C 0
s Eulemur_albifrons.k141_576796                              41072 2 -     44621 TG
i Eulemur_albifrons.k141_576796                          C 0 C 0
s Eulemur_collaris.k141_377015                                7453 2 -     16928 TG
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              16485 2 -     25546 TG
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            13681 2 +     26330 TG
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14916 2 +     23973 TG
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                13678 2 +     75513 TG
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 11608 2 +     97555 TG
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                             1100 2 +     13026 TG
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  5152 2 -     17153 TG
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              14725 2 +    111500 TG
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237900 2 + 206538554 TC
i Felis_catus.CM001381.2                                 I 3 C 0
s Felis_catus_fca126.CM031415.1                           20196743 2 + 205367284 TC
i Felis_catus_fca126.CM031415.1                          I 3 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 10497 2 -     36744 TC
i Felis_nigripes.FelNig_flattened_line_20823             I 3 C 0
s Fukomys_damarensis.KN121974.1                             851353 2 +   3816255 GC
i Fukomys_damarensis.KN121974.1                          I 3 C 0
s Galago_moholi.ctg2040                                     427539 2 -    453645 TG
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             5229 2 +     11339 TG
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            2527 2 +     41679 TG
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     609559 2 -    660261 TT
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 1 C 0
s Gorilla_beringei.k141_3596273                              17034 2 -     32273 TA
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186339170 2 + 186649187 TA
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33557 2 +     78134 AC
i Graphiurus_murinus.GraMur_scaffold_10447               I 3 C 0
s Hapalemur_alaotrensis.k141_170648                           7780 2 -     19426 TG
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12933 2 -     15286 TG
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             14572 2 +     18253 TG
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         14673 2 -     41752 TG
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         14510 2 -     16460 TG
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243279 2 +    327341 TC
i Helogale_parvula.HelPar_flattened_line_2585            I 3 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18763 2 +     36099 CT
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 1 C 0
s Heterocephalus_glaber.JH602082.1                        20663109 2 +  22651954 GC
i Heterocephalus_glaber.JH602082.1                       I 3 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1840 2 +      7595 CC
i Heterohyrax_brucei.HetBruBak_scaffold_122365           I 3 C 0
s Hipposideros_armiger.JXIK01000431.1                       111455 2 +   1711038 CG
i Hipposideros_armiger.JXIK01000431.1                    I 3 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               42885 2 +     43066 CT
i Hipposideros_galeritus.HipGal_scaffold_29171           I 3 C 0
s Hoolock_leuconedys.ctg274                                    435835 2 +    630532 TG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45985 2 +     55795 TT
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 3 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84003 2 +    135385 GT
i Hystrix_cristata.HysCri_scaffold_5660                  I 3 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7521838 2 -   7955117 AC
i Ictidomys_tridecemlineatus.JH393364.1                  I 3 C 0
s Indri_indri.k141_3655594                                   23467 2 +     31101 TG
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               23523 2 +     23964 TC
i Inia_geoffrensis.IniGeo_flattened_line_48101           I 1 C 0
s Jaculus_jaculus.JH725527.1                               8278090 2 -   9596543 AC
i Jaculus_jaculus.JH725527.1                             I 3 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                2880 2 -      3359 TC
i Kogia_breviceps.KogBre_flattened_line_192630           I 1 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    17337 2 -     42476 TC
i Lasiurus_borealis.LasBor_scaffold_32767                I 3 C 0
s Lemur_catta.scaffold_24                                 15525025 2 -  30322482 TG
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        8955 2 +     64341 TG
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           1295 2 -     35062 TG
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        8982 2 +     35603 TG
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    30595 2 +     38576 TG
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         27299 2 +     66356 TG
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         11915 2 -     23766 TG
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29969 2 +     45836 TG
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          2514 2 +     25010 TG
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27909 2 +     54090 TG
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3044014 2 +   3914936 tc
i Leptonychotes_weddellii.KB714746.1                     I 3 I 2
s Lepus_americanus.LepAme_scaffold_107385                     7400 2 -     14121 GT
i Lepus_americanus.LepAme_scaffold_107385                I 3 C 0
s Lipotes_vexillifer.KE559953.1                             268574 2 -    662738 TC
i Lipotes_vexillifer.KE559953.1                          I 1 C 0
s Lophocebus_aterrimus.ctg367                              1438185 2 +   1826925 TG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_399337                            15905 2 -     33856 ag
i Loris_lydekkerianus.k141_399337                        C 0 C 0
s Loris_tardigradus.ctg83                                  1013616 2 +   6120653 ag
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4218310 2 -  43346337 CC
i Loxodonta_africana.GL010049.1                          I 3 C 0
s Lycaon_pictus.CM007581.1                                17956278 2 -  59628241 tc
i Lycaon_pictus.CM007581.1                               I 3 C 0
s Macaca_arctoides.k141_2326796                               8000 2 +     40492 TG
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59677259 2 +  60120075 TG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13775 2 -     26193 TG
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            81559 2 -    114318 TG
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  7246 2 -     23192 TG
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16719 2 -     29190 TG
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  25284 2 +     37952 TG
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186840373 2 + 187317192 TG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458936 2 -  25927173 TG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  81132 2 +     89720 TG
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 8133 2 +     20474 TG
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   7933 2 -     14993 CG
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  330799 2 -    668171 TG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 6246 2 -     24072 TG
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26871 2 -     45290 TG
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91585 2 +     94391 TT
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 2 C 0
s Mandrillus_leucophaeus.scaffold280                      23938462 2 -  24302211 TG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352584 2 +    752769 TG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              19206 2 +    737560 TC
i Manis_javanica.JSZB01003497.1                          I 3 C 0
s Manis_pentadactyla.KN006162.1                              51192 2 -    317179 TC
i Manis_pentadactyla.KN006162.1                          I 3 C 0
s Marmota_marmota.CZRN01000018.1                          33104033 2 -  40650429 AC
i Marmota_marmota.CZRN01000018.1                         I 3 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        14303 2 -    207569 GT
i Megaderma_lyra.MegLyr_scaffold_4542                    I 3 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             11026 2 +     13704 TC
i Mellivora_capensis.MelCap_flattened_line_69365         I 3 I 239
s Mesoplodon_bidens.MesBid_scaffold_108144                    4191 2 +     10310 TC
i Mesoplodon_bidens.MesBid_scaffold_108144               I 1 C 0
s Mico_argentatus.k141_1239457                                7112 2 -      7380 TG
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_schneideri.k141_1950671                                      7085 2 -      7356 TG
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18292467 2 -  93316391 TA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    24430 2 -    145209 tt
i Microgale_talazaci.MicTal_scaffold_6613                I 813 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                16601 2 -     19307 TC
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 3 C 0
s Miopithecus_ogouensis.k141_534055                          10166 2 -     28506 TG
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6881 2 -      8324 TC
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 3 I 2
s Mirza_zaza.k141_952172                                     10011 2 -     37649 TG
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    27697 2 -    437263 TC
i Monodon_monoceros.MonMon_M_scaffold_103                I 1 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142602 2 -    366855 TG
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 3 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   1640 2 +     82753 TT
i Moschus_moschiferus.MosMos_scaffold_13123              I 1 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   36380 2 +     37127 TC
i Mungos_mungo.MunMun_flattened_line_23663               I 3 C 0
s Murina_feae.MurFea_scaffold_85699                           7782 2 +     14753 TC
i Murina_feae.MurFea_scaffold_85699                      I 3 C 0
s Mustela_putorius.JH418006.1                               302437 2 -  14710649 TC
i Mustela_putorius.JH418006.1                            I 3 I 226
s Myocastor_coypus.MyoCoy_scaffold_10123                     72129 2 -     80779 GC
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 3 C 0
s Myotis_brandtii.KE162005.1                                281424 2 -  10118263 TC
i Myotis_brandtii.KE162005.1                             I 3 C 0
s Myotis_davidii.KB100139.1                                1588679 2 -   6019432 TC
i Myotis_davidii.KB100139.1                              I 3 C 0
s Myotis_lucifugus.GL429869.1                              3904776 2 -   4330536 TC
i Myotis_lucifugus.GL429869.1                            I 3 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                         927 2 +      1835 TC
i Myotis_myotis.MyoMyo_scaffold_281845                   I 3 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190192 2 +    196477 TT
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 3 C 0
s Nannospalax_galili.KL204047.1                            2035481 2 -   3037898 tc
i Nannospalax_galili.KL204047.1                          I 3 C 0
s Nasalis_larvatus.k141_413338                               16170 2 +     21681 TG
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308474 2 +  31847680 tc
i Neomonachus_schauinslandi.NINY01007730.1               I 3 I 2
s Neophocaena_asiaeorientalis.KZ687982.1                   5866654 2 +   7148211 TC
i Neophocaena_asiaeorientalis.KZ687982.1                 I 1 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    758820 2 +    783361 TC
i Noctilio_leporinus.NocLep_scaffold_251                 I 3 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150340 2 -   9404916 tc
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 3 C 0
s Nycticebus_bengalensis.LG01                            102587145 2 - 196305487 TG
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                             1069 2 +      2075 TG
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105762500 2 + 199412804 TG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1364755 2 +   3988456 TC
i Ochotona_princeps.JH802162.1                           I 3 C 0
s Odobenus_rosmarus.KB229312.1                              507619 2 -   2017862 tc
i Odobenus_rosmarus.KB229312.1                           I 3 I 2
s Okapia_johnstoni.LVCL01S0005463.1                          77472 2 -    150152 TT
i Okapia_johnstoni.LVCL01S0005463.1                      I 1 C 0
s Orcinus_orca.KB316932.1                                  2782577 2 -  10937097 TC
i Orcinus_orca.KB316932.1                                I 1 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387              11077 2 -     18566 tc
i Orycteropus_afer.OryAfe_flattened_line_144387          I 3 C 0
s Oryctolagus_cuniculus.CM000791.1                        67148259 2 + 174332312 TT
i Oryctolagus_cuniculus.CM000791.1                       I 3 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       463290 2 -    559221 tc
i Otocyon_megalotis.JAEUCK010005147.1                    I 3 C 0
s Otolemur_crassicaudatus.k141_222918                         5054 2 +      8798 TG
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             697216 2 -   1103335 TG
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   17586738 2 +  44047080 CT
i Ovis_aries.CM001607.2                                  I 1 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      174715 2 -    191736 CT
i Ovis_canadensis.OviCan_scaffold_2572                   I 1 C 0
s Pan_paniscus.KQ411613.1                                    45122 2 +     80009 TG
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189144020 2 + 189151597 TG
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152104 2 +    230217 TC
i Panthera_onca.PanOnc_flattened_line_3271               I 3 C 0
s Panthera_pardus.KV860321.1                                265313 2 +  18783137 TC
i Panthera_pardus.KV860321.1                             I 3 C 0
s Panthera_tigris.KE722367.1                               4722193 2 -   8748460 TC
i Panthera_tigris.KE722367.1                             I 3 C 0
s Pantholops_hodgsonii.KE114653.1                          1265633 2 -   2937107 CT
i Pantholops_hodgsonii.KE114653.1                        I 1 C 0
s Papio_anubis.CM001495.2                                183444262 2 + 183742232 TG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7908 2 +     20448 TG
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20564720 2 +  20919399 TG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6652 2 +     41871 TG
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     9945 2 +     27711 TG
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                   942 2 -     11374 TG
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13599 2 -     78924 TC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 3 C 0
s Perodicticus_ibeanus.k141_855320                           11045 2 +     13100 TG
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             9439 2 +     25941 TG
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     29014 2 -     29689 GC
i Petromus_typicus.PetTyp_scaffold_42190                 I 3 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               9616 2 +     63832 TC
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 1 C 0
s Piliocolobus_badius.k141_1234363                           44661 2 +     62158 TG
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        39408 2 +     89929 TG
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40824 2 +     51399 TG
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14297063 2 -  14605196 TG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2716 2 +     22620 TC
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 3 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           35317 2 +     35617 TC
i Platanista_gangetica.PlaMin_flattened_line_32310       I 1 C 0
s Pongo_abelii.CM009266.2                                189132165 2 + 189387572 TG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9571772 2 +   9816681 TG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               74345 2 -     81375 TG
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              6166 2 +     19060 TG
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 14295 2 -     22811 CC
i Procavia_capensis.ProCapCap_scaffold_85530             I 3 C 0
s Prolemur_simus.MPIZ01000396.1                            2597705 2 -   4620579 TG
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     991687 2 +   2598838 TG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          29999 2 +     38485 TG
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              2041 2 -     13098 CG
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          27520 2 +     35766 CG
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           5707 2 -     24134 CG
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        29532 2 -     67325 TG
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           5755 2 -      6182 TG
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            16110 2 -     21811 TC
i Pteronotus_parnellii.KE909381.1                        I 3 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41241 2 +     42204 TC
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 3 I 231
s Pteropus_alecto.KB030862.1                              22977726 2 +  28871421 TT
i Pteropus_alecto.KB030862.1                             I 3 C 0
s Pteropus_vampyrus.KN534172.1                                7779 2 -      8028 TT
i Pteropus_vampyrus.KN534172.1                           I 3 C 0
s Puma_concolor.QAVW01001104.1                            20275266 2 -  38429054 TC
i Puma_concolor.QAVW01001104.1                           I 3 C 0
s Pygathrix_cinerea.k141_1153803                             16152 2 -     91421 TG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7610272 2 +   7812017 TG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             16151 2 -     72585 TG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6215 2 +     55207 TT
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 1 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        367942 2 -   3329780 tt
i Rhinolophus_sinicus.LVEH01000134.1                     I 3 C 0
s Rhinopithecus_bieti.k119_217274                             7862 2 -     11128 TG
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91237211 2 - 195417433 TG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672867 2 +   7961872 TG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88768 2 -     96226 TT
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 3 C 0
s Saguinus_bicolor.k141_8081                                  2269 2 +     42994 TG
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                              964 2 +      2253 TG
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               1393 2 -      8737 TG
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                              1046 2 +      2343 TG
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209475923 2 + 209938924 TG
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                 369 2 -      7576 TG
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951992 2 - 121099817 TG
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24334 2 +     46362 TG
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               24429 2 +     45824 TG
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             41108 2 -     64574 TG
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4181 2 -     23631 TG
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 24325 2 -     61129 TG
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5421675 2 -   5703754 TG
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          56916 2 -     80660 TG
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154148 2 -    313613 TT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 3 C 0
s Semnopithecus_entellus.k141_1672505                         1043 2 -     12572 TG
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27893 2 +     39453 TG
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            8411 2 +     27826 TG
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             7933 2 -     19483 TG
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      1234 2 -     12762 TG
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           1095 2 +     13763 TG
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               4703 2 +   1910179 TC
i Solenodon_paradoxus.SolPar_flattened_line_126          I 3 C 0
s Sorex_araneus.JH798187.1                                13651949 2 -  18376816 TC
i Sorex_araneus.JH798187.1                               I 3 C 0
s Spermophilus_dauricus.KZ294078.1                         1954891 2 -   3870691 AC
i Spermophilus_dauricus.KZ294078.1                       I 3 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             31702 2 +     97271 TC
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 3 I 241
s Suricata_suricatta.SurSur_flattened_line_6629              19284 2 -    196729 TC
i Suricata_suricatta.SurSur_flattened_line_6629          I 3 C 0
s Sus_scrofa.JH118708.1                                      37348 2 -     47482 TC
i Sus_scrofa.JH118708.1                                  I 1 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                11770 2 +     41958 TC
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 3 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73557 2 +    116680 TT
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 3 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      119726 2 -    156842 tc
i Tapirus_indicus.TapInd_scaffold_9301                   I 3 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    388196 2 +    539355 tc
i Tapirus_terrestris.TapTer_scaffold_755                 I 3 C 0
s Theropithecus_gelada.CM009954.1                        186429580 2 + 186847797 TG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106319 2 +    114563 GC
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 3 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   7319 2 +      8208 TT
i Tolypeutes_matacus.TolMat_scaffold_228639              I 3 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     82157 2 +    610378 TC
i Tonatia_saurophila.TonSau_scaffold_294                 I 3 C 0
s Trachypithecus_auratus.k141_722599                         11984 2 -     20410 TG
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      1098 2 -     12674 TG
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       12085 2 +     19930 TG
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       8496 2 -     19997 TG
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48635 2 -     60166 TG
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        16107 2 -     27529 TG
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     16051 2 -     18194 TG
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9763 2 -     21137 TG
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    8466 2 -     10723 TG
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7638 2 +      9834 TG
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        25951 2 +     32220 TG
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5940053 2 +   6242583 TG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        9304 2 +     20839 TG
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                     573 2 +     27266 TC
i Tragulus_javanicus.TraJav_scaffold_40725               I 1 C 0
s Trichechus_manatus.JH594705.1                            4294215 2 +  10818551 CC
i Trichechus_manatus.JH594705.1                          I 3 C 0
s Tupaia_chinensis.KB320699.1                              2156732 2 +   4065304 AC
i Tupaia_chinensis.KB320699.1                            I 3 C 0
s Tupaia_tana.TupTan_flattened_line_97126                    10178 2 -     10553 AC
i Tupaia_tana.TupTan_flattened_line_97126                I 3 C 0
s Tursiops_truncatus.MRVK01000835.1                       15738822 2 +  33153633 TC
i Tursiops_truncatus.MRVK01000835.1                      I 1 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54245 2 -     77625 TC
i Uropsilus_gracilis.UroGra_scaffold_12083               I 3 C 0
s Ursus_maritimus.KK499267.1                               4851390 2 -   5085361 TC
i Ursus_maritimus.KK499267.1                             I 3 C 0
s Varecia_rubra.k141_590885                                  12364 2 +     50397 TG
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             12423 2 +     24756 TG
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5372721 2 -   5488506 TC
i Vicugna_pacos.KN270157.1                               I 1 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 11738 2 -     43706 tc
i Vulpes_lagopus.VulLag_flattened_line_30954             I 3 C 0
s Xerus_inauris.XerIna_scaffold_2302                          2023 2 +    224448 AC
i Xerus_inauris.XerIna_scaffold_2302                     I 3 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      15818 2 +     63895 TC
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 3 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_3601914            169 2 +       295 TC
i Ziphius_cavirostris.ZipCav_flattened_line_3601914      I 1 C 0
e Mus_pahari.LT608297.1                                   31355930 6 -  89631738 I
e Mus_spretus.CM004101.1                                  90753339 6 - 130317789 I
e Mus_musculus.chr8                                       87651276 6 - 129401213 I
e Mus_caroli.LT608237.1                                   84362283 6 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Tarsius_wallacei.k141_254427                                1877 3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080 3 +     70052 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sigmodon_hispidus.SigHis_scaffold_42075                     1222 6 -     30804 I
e Rattus_norvegicus.chr16                                 53571529 6 +  90668790 I
e Psammomys_obesus.NESX01036370.1                            11313 6 -     21651 I
e Peromyscus_maniculatus.KI615324.1                       18195689 6 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Onychomys_torridus.OnyTor_scaffold_2986                    81109 7 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   26073 6 +     28053 I
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             35221 4 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1851541 4 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11261424 6 -  27267610 I
e Mesocricetus_auratus.KB708134.1                         12183131 6 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 33667 6 +    140813 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Glis_glis.GliGli_scaffold_19807                            32063 0 +     49224 C
e Galeopterus_variegatus.GalVar_scaffold_108840               2137 3 -      9135 I
e Ellobius_talpinus.LOJH01081419.1                            1345 6 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          21439 6 -    110024 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cricetulus_griseus.LT883664.1                           11668469 6 + 224834208 I
e Cephalopachus_bancanus.k141_1423433                         6085 3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Carlito_syrichta.NW_007259797.1                           156587 3 -    496798 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     71718 6 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       7781 4 +     62944 T-CCT
s Acinonyx_jubatus.LLWD01001279.1                           828260 4 -   1699592 C-TTC
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511545 4 -  29979442 C-TCC
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             80605 4 -    347723 C-TCC
i Ailurus_fulgens.LNAC01001112.1                         I 322 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     75431 4 -     89534 T-TCC
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 1
s Allenopithecus_nigroviridis.k141_3361533                   15707 4 -     52922 T-CCT
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15627 4 -     28001 T-CCT
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          6125 4 -     18505 T-CCT
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           6977 4 -     12518 T-CCT
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              8552 4 +     51355 T-CCT
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                1661 4 -     36483 T-CCT
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              12113 4 +     28687 T-CCT
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                  626 4 +     27940 T-CCT
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            1670 4 -      9457 T-CCT
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                              626 4 +     30492 T-CCT
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              4621 4 +     47717 T-CCT
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              1353 4 +      5663 T-CCT
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             15805 4 +     50774 T-CCT
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          676442 4 -   2318259 C-TCT
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      186315 3 +    412891 T-CC-
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             98923 4 -    100397 C-TCT
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aotus_azarae.k141_3104676                                  16794 4 -     33861 T-CCT
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            16791 4 -     34016 T-CCT
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299218 4 -   5030052 T-CCT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             16827 4 -     34685 T-CCT
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               29952 4 -     47192 T-CCT
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13560 4 +     20879 C-TCC
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       12238 4 +     14667 T-CTC
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5697 3 +     43469 C-CT-
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  54646 4 -     92717 T-CCC
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              55277 4 +     85213 T-CCC
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15192672 4 +  23207421 C-TCC
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         3137 4 -     18090 C-TCC
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    27364 4 +     34529 C-TCT
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    200422 4 -    288883 C-TCT
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003028.1                                  18363326 4 - 116941312 C-TCT
i Bos_indicus.CM003028.1                                 C 0 I 5
s Bos_mutus.JH880303.1                                     1126182 4 -   1948126 C-TCT
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000184.6                                   18200300 4 - 114055384 C-TCT
i Bos_taurus.CM000184.6                                  C 0 I 5
s Bubalus_bubalis.KI419123.1                               2819932 4 +   4408762 C-CCT
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Callibella_humilis.k141_1278103                             6678 4 -     10423 T-CCT
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_737284                                223 4 -     31217 T-CCT
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                              517 4 +      5377 T-CCT
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592378 4 - 189096842 T-CCT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1192 4 -     12329 T-CCT
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10003197 1 -  17673402 C----
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2335673 1 -   7040546 C----
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  403972 1 -   1652518 C----
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17800121 4 -  60362399 c-tcc
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                      869 4 -     43241 c-tcc
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9035564 4 -   9314153 c-tcc
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17960040 4 -  59632846 c-tcc
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18501337 4 +  63665305 c-tcc
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18830560 4 +  46296322 C-TCT
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18061280 4 -  44709034 C-TCT
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1949 4 -     12242 A-TCC
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6066 3 -     11696 C-CC-
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138244 4 +    179628 t-tcc
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 1
s Catagonus_wagneri.CatWag_scaffold_2839                     94491 4 +    217609 C-TCC
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                         11118 4 -     11392 T-CCT
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               7302 4 -      7577 T-CCT
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25653723 4 +  26074798 T-CCT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                1661 4 +     28840 T-CCT
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 1390 4 +     14051 T-CCT
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Ceratotherium_simum.JH767749.1                          12232422 4 +  27778364 C-TCC
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3449 4 -     25243 C-TCC
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4476644 4 +   4669795 T-CCT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        1146 4 +     17872 T-CCT
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           1803 4 -     14043 T-CCT
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9836 4 +     27781 T-CCT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        10004 4 -     20310 T-CCT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          12984 4 +     29689 T-CCT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7730 4 -     20078 T-CCT
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          15652 4 -     27936 T-CCT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            4518 4 -     17152 T-CCT
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38818063 4 +  39242232 T-CCT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223752 4 -  21565898 T-CCT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40871 4 -     53127 T-CCT
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        1122 4 +     13442 T-CCT
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15671 4 -     27947 T-CCT
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         15647 4 +     17596 T-CCT
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          1690 4 +     14005 T-CCT
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1431 4 -      8501 C-TCC
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             22025 4 -     52598 T-CCC
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           17396 4 +     57038 T-TCC
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1253824 4 +   2543920 C-TCC
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2206961                           2006 4 -     15524 T-GCT
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18429629 4 -  18827391 T-CCT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       16065 4 -     50209 T-CCT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135423066 4 + 135778131 T-CCT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 19252 4 +     19366 c-tcc
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            174326 4 +    839153 C-TCC
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1911544 4 +   2368649 T-CCT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949796 4 + 200372422 T-CCT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              38078 4 +     84244 T-CCT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17548998 4 -  53390261 A-TCC
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1425 3 +     23735 C-TC-
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 50967 4 +     63868 C-TCC
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               3897 4 -     19598 T-TAT
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29442 4 -     87169 C-TTT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    838016 4 +   1526836 T-TCC
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  36818 4 +     51376 C-TCC
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            64448 4 +   2246927 C-TCC
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12538228 4 -  12879189 T-CCC
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16812310 4 +  35494412 C-TCC
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8631063 3 +  20541912 C-CC-
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  674270 4 +   1390856 c-tcc
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    7022 4 +    198055 C-TCC
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37300 4 +     67921 C-TCC
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Echinops_telfairi.JH980293.1                            48781715 4 + 111700974 C-TCC
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.KE759718.1                                  11494 3 +     11740 C-TC-
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       311597 4 +    607251 C-TCT
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1098680 4 +  10337057 C-TCC
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16330556 4 -  41312741 c-tcc
i Enhydra_lutris.KZ291758.1                              I 268 C 0
s Eptesicus_fuscus.JH977646.1                              2146681 3 -  14770903 C-TC-
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1284527 4 +   4378816 c-ttc
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18532347 4 -  39960074 C-TTC
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               34376 4 +    498745 C-TTC
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3329211 4 -   7059049 T-TCC
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21206234 4 -  21539334 T-CCT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11984 4 +    133382 C-TCC
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             25921 4 -     44125 C-TCC
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Eulemur_albifrons.k141_576796                              41074 4 -     44621 T-CCT
i Eulemur_albifrons.k141_576796                          C 0 C 0
s Eulemur_collaris.k141_377015                                7455 4 -     16928 T-CCT
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              16487 4 -     25546 T-CCT
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            13683 4 +     26330 A-CCT
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14918 4 +     23973 T-CCT
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                13680 4 +     75513 A-CCT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 11610 4 +     97555 C-CCT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                             1102 4 +     13026 T-CCT
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  5154 4 -     17153 T-CCT
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              14727 4 +    111500 T-CCT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237902 4 + 206538554 C-TTC
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20196745 4 + 205367284 C-TTC
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 10499 4 -     36744 C-TTC
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             851355 4 +   3816255 C-TTC
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg2040                                     427541 4 -    453645 T-CTC
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             5231 4 +     11339 T-CTC
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            2529 4 +     41679 T-CTC
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               2140 1 -      9135 ----C
i Galeopterus_variegatus.GalVar_scaffold_108840          I 3 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     609561 4 -    660261 C-TCT
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Gorilla_beringei.k141_3596273                              17036 4 -     32273 T-CCT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186339172 4 + 186649187 T-CCT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33559 4 +     78134 C-TCC
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           7782 4 -     19426 C-CCC
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12935 4 -     15286 T-CCC
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             14574 4 +     18253 T-CCC
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         14675 4 -     41752 C-CCC
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         14512 4 -     16460 T-CCC
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243281 4 +    327341 C-TTT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18765 4 +     36099 C-TCT
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20663111 4 +  22651954 C-TCC
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1842 4 +      7595 A-CCC
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       111457 3 +   1711038 C-TC-
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               42887 3 +     43066 C-TC-
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    435837 4 +    630532 T-CCT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45987 4 +     55795 C-TTT
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84005 4 +    135385 C-TCC
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7521840 4 -   7955117 C-TCT
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 65
s Indri_indri.k141_3655594                                   23469 4 +     31101 T-CCC
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               23525 4 +     23964 C-TCC
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8278092 4 -   9596543 C-TCC
i Jaculus_jaculus.JH725527.1                             C 0 I 1
s Kogia_breviceps.KogBre_flattened_line_192630                2882 4 -      3359 C-TCC
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    17339 3 -     42476 T-TC-
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15525027 4 -  30322482 T-CCC
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        8957 4 +     64341 T-GCT
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           1297 4 -     35062 T-GCT
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        8984 4 +     35603 T-GCT
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    30597 4 +     38576 T-CCT
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         27301 4 +     66356 T-CCT
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         11917 4 -     23766 T-TCC
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29971 4 +     45836 T-TCC
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          2516 4 +     25010 T-TCC
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27911 4 +     54090 T-TCC
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3044018 2 +   3914936 ---cc
i Leptonychotes_weddellii.KB714746.1                     I 2 C 0
s Lepus_americanus.LepAme_scaffold_107385                     7402 4 -     14121 T-TCC
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             268576 4 -    662738 C-TCC
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1438187 4 +   1826925 T-CCT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_399337                            15907 4 -     33856 t-ctc
i Loris_lydekkerianus.k141_399337                        C 0 C 0
s Loris_tardigradus.ctg83                                  1013618 4 +   6120653 t-ctc
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4218312 4 -  43346337 C-TTC
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17956280 4 -  59628241 c-tcc
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               8002 4 +     40492 T-CCT
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59677261 4 +  60120075 T-CCT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13777 4 -     26193 T-CCT
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            81561 4 -    114318 T-CCT
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  7248 4 -     23192 T-CCT
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16721 4 -     29190 T-CCT
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  25286 4 +     37952 T-CCT
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186840375 4 + 187317192 T-CCT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458938 4 -  25927173 T-CCT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  81134 4 +     89720 T-CCT
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 8135 4 +     20474 T-CCT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   7935 4 -     14993 T-CCT
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  330801 4 -    668171 T-CCT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 6248 4 -     24072 T-CCT
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26873 4 -     45290 T-CCT
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91587 3 +     94391 C-TC-
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23938464 4 -  24302211 T-CCT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352586 4 +    752769 T-CCT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              19208 4 +    737560 C-TCC
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              51194 4 -    317179 C-TCC
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33104035 4 -  40650429 C-TCt
i Marmota_marmota.CZRN01000018.1                         C 0 I 169
s Megaderma_lyra.MegLyr_scaffold_4542                        14305 3 -    207569 C-TC-
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             11267 4 +     13704 C-TCC
i Mellivora_capensis.MelCap_flattened_line_69365         I 239 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    4193 4 +     10310 C-TCC
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Mico_argentatus.k141_1239457                                7114 4 -      7380 T-CCT
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_schneideri.k141_1950671                                      7087 4 -      7356 T-CCT
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18292469 5 -  93316391 TTCCC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    24432 4 -    145209 c-tcc
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                16603 3 -     19307 C-CC-
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miopithecus_ogouensis.k141_534055                          10168 4 -     28506 T-CCT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6885 2 -      8324 ---CC
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 2 C 0
s Mirza_zaza.k141_952172                                     10013 4 -     37649 T-CCC
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    27699 4 -    437263 C-TCC
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142604 3 -    366855 C-CC-
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   1642 4 +     82753 C-TCT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   36382 4 +     37127 C-TTT
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           7784 3 +     14753 T-TC-
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mustela_putorius.JH418006.1                               302665 4 -  14710649 c-tcc
i Mustela_putorius.JH418006.1                            I 226 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     72131 4 -     80779 A-TCC
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                281426 3 -  10118263 C-TC-
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1588681 3 -   6019432 C-TC-
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3904778 3 -   4330536 C-TC-
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                         929 3 +      1835 T-TC-
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190194 4 +    196477 C-TCC
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2035483 4 -   3037898 c-tcc
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               16172 4 +     21681 T-CCT
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308478 2 +  31847680 ---cc
i Neomonachus_schauinslandi.NINY01007730.1               I 2 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5866656 4 +   7148211 C-TCC
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    758822 3 +    783361 C-CC-
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150342 4 -   9404916 c-tcc
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102587147 4 - 196305487 T-CTC
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                             1071 4 +      2075 T-CTC
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105762502 4 + 199412804 T-CTC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1364757 4 +   3988456 C-ACT
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              507623 2 -   2017862 ---cc
i Odobenus_rosmarus.KB229312.1                           I 2 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          77474 4 -    150152 C-TCT
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  2782579 4 -  10937097 C-TCC
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387              11079 4 -     18566 c-tcc
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67148261 4 + 174332312 T-TCC
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       463292 4 -    559221 c-tcc
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         5056 4 +      8798 T-CTC
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             697218 4 -   1103335 T-CTC
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   17586740 4 +  44047080 C-TCT
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      174717 4 -    191736 C-TCT
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    45124 4 +     80009 T-CCT
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189144022 4 + 189151597 T-CCT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152106 4 +    230217 C-TTC
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                265315 4 +  18783137 C-TTC
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4722195 4 -   8748460 C-TTC
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1265635 4 -   2937107 C-TCT
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183444264 4 + 183742232 T-CCT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7910 4 +     20448 T-CCT
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20564722 4 +  20919399 T-CCT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6654 4 +     41871 T-CCT
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     9947 4 +     27711 T-CCT
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                   944 4 -     11374 T-CCT
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13601 4 -     78924 C-TTT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           11047 4 +     13100 T-CTC
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             9441 4 +     25941 T-CTC
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     29016 4 -     29689 T-TTC
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               9618 4 +     63832 C-TCC
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           44663 4 +     62158 T-CCT
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        39410 4 +     89929 T-CCT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40826 4 +     51399 T-CCT
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14297065 4 -  14605196 T-CCT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2718 3 +     22620 C-TT-
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           35319 4 +     35617 C-TCC
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189132167 4 + 189387572 T-CCT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9571774 4 +   9816681 T-CCT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               74347 4 -     81375 T-CCT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              6168 4 +     19060 T-CCT
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 14297 4 -     22811 A-CCC
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2597707 4 -   4620579 T-CCC
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     991689 4 +   2598838 T-CCC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          30001 4 +     38485 T-CCC
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              2043 4 -     13098 T-CCC
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          27522 4 +     35766 T-CCC
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           5709 4 -     24134 T-CCC
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        29534 4 -     67325 T-CCC
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           5757 4 -      6182 T-CCC
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            16112 3 -     21811 C-CC-
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41474 4 +     42204 c-tcc
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 231 C 0
s Pteropus_alecto.KB030862.1                              22977728 3 +  28871421 C-TC-
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                7781 3 -      8028 C-TC-
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20275268 4 -  38429054 C-TTT
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             16154 4 -     91421 T-CCT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7610274 4 +   7812017 T-CCT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             16153 4 -     72585 T-CCT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6217 4 +     55207 C-TCT
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        367944 3 -   3329780 c-tc-
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             7864 4 -     11128 T-CCT
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91237213 4 - 195417433 T-CCT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672869 4 +   7961872 T-CCT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88770 3 -     96226 T-TC-
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_8081                                  2271 4 +     42994 T-GCT
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                              966 4 +      2253 T-GCT
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               1395 4 -      8737 T-GCT
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                              1048 4 +      2343 T-GCT
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209475925 4 + 209938924 T-GCT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                 371 4 -      7576 T-GCT
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951994 4 - 121099817 T-CCT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24336 4 +     46362 T-CCT
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               24431 4 +     45824 T-CCT
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             41110 4 -     64574 T-CCT
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4183 4 -     23631 T-CCT
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 24327 4 -     61129 T-CCT
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5421677 4 -   5703754 T-CCT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          56918 4 -     80660 T-CCT
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154150 4 -    313613 G-TCC
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                         1045 4 -     12572 T-CCT
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27895 4 +     39453 T-CCT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            8413 4 +     27826 T-CCT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             7935 4 -     19483 T-CCT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      1236 4 -     12762 T-CCT
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           1097 4 +     13763 T-CCT
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               4705 4 +   1910179 C-TCT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13651951 4 -  18376816 C-CCC
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1954893 4 -   3870691 C-TCt
i Spermophilus_dauricus.KZ294078.1                       C 0 I 159
s Spilogale_gracilis.SpiGra_flattened_line_13525             31945 4 +     97271 C-TAG
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 241 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              19286 4 -    196729 C-TTT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.JH118708.1                                      37350 4 -     47482 C-TCC
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                11772 3 +     41958 C-TC-
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73559 4 +    116680 C-TCC
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      119728 4 -    156842 c-tcc
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    388198 4 +    539355 c-tcc
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Theropithecus_gelada.CM009954.1                        186429582 4 + 186847797 T-CCT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106321 4 +    114563 T-TTC
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   7321 4 +      8208 C-TCC
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     82159 3 +    610378 C-CC-
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         11986 4 -     20410 T-CCT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      1100 4 -     12674 T-CCT
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       12087 4 +     19930 T-CCT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       8498 4 -     19997 T-CCT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48637 4 -     60166 T-CCT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        16109 4 -     27529 T-CCT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     16053 4 -     18194 T-CCT
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9765 4 -     21137 T-CCT
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    8468 4 -     10723 T-CCT
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7640 4 +      9834 T-CCT
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        25953 4 +     32220 T-CCT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5940055 4 +   6242583 T-CCT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        9306 4 +     20839 T-CCT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                     575 4 +     27266 C-TTC
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Trichechus_manatus.JH594705.1                            4294217 4 +  10818551 C-CCG
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2156734 1 +   4065304 C----
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                    10180 1 -     10553 C----
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15738824 4 +  33153633 C-TCC
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54247 4 -     77625 T-TCC
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4851392 4 -   5085361 C-TCC
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  12366 4 +     50397 T-CCC
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             12425 4 +     24756 T-CCC
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5372723 1 -   5488506 C----
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 11740 4 -     43706 c-tcc
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          2025 4 +    224448 T-TCC
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      15820 4 +     63895 C-TCC
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 1
s Ziphius_cavirostris.ZipCav_flattened_line_3601914            171 4 +       295 C-TCC
i Ziphius_cavirostris.ZipCav_flattened_line_3601914      C 0 C 0
e Mus_pahari.LT608297.1                                   31355930 6 -  89631738 I
e Mus_spretus.CM004101.1                                  90753339 6 - 130317789 I
e Mus_musculus.chr8                                       87651276 6 - 129401213 I
e Mus_caroli.LT608237.1                                   84362283 6 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Tarsius_wallacei.k141_254427                                1877 3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080 3 +     70052 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sigmodon_hispidus.SigHis_scaffold_42075                     1222 6 -     30804 I
e Rattus_norvegicus.chr16                                 53571529 6 +  90668790 I
e Psammomys_obesus.NESX01036370.1                            11313 6 -     21651 I
e Peromyscus_maniculatus.KI615324.1                       18195689 6 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Onychomys_torridus.OnyTor_scaffold_2986                    81109 7 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   26073 6 +     28053 I
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             35221 4 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1851541 4 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11261424 6 -  27267610 I
e Mesocricetus_auratus.KB708134.1                         12183131 6 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 33667 6 +    140813 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Glis_glis.GliGli_scaffold_19807                            32063 0 +     49224 C
e Ellobius_talpinus.LOJH01081419.1                            1345 6 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          21439 6 -    110024 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cricetulus_griseus.LT883664.1                           11668469 6 + 224834208 I
e Cephalopachus_bancanus.k141_1423433                         6085 3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Carlito_syrichta.NW_007259797.1                           156587 3 -    496798 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     71718 6 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       7785 1 +     62944 C
s Acinonyx_jubatus.LLWD01001279.1                           828264 1 -   1699592 G
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511549 1 -  29979442 C
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             80609 1 -    347723 A
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     75436 1 -     89534 T
i Allactaga_bullata.AllBul_scaffold_9566                 I 1 C 0
s Allenopithecus_nigroviridis.k141_3361533                   15711 1 -     52922 C
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15631 1 -     28001 C
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          6129 1 -     18505 C
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           6981 1 -     12518 C
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              8556 1 +     51355 C
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                1665 1 -     36483 C
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              12117 1 +     28687 C
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                  630 1 +     27940 C
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            1674 1 -      9457 C
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                              630 1 +     30492 C
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              4625 1 +     47717 C
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              1357 1 +      5663 C
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             15809 1 +     50774 C
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          676446 1 -   2318259 C
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 4
s Anoura_caudifer.AnoCau_scaffold_1412                      186318 1 +    412891 C
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             98927 1 -    100397 C
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 I 4
s Aotus_azarae.k141_3104676                                  16798 1 -     33861 C
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            16795 1 -     34016 C
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299222 1 -   5030052 C
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             16831 1 -     34685 C
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               29956 1 -     47192 C
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13564 1 +     20879 C
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 1
s Arctocebus_calabarensis.k141_2318572                       12242 1 +     14667 C
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5700 1 +     43469 C
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  54650 1 -     92717 C
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              55281 1 +     85213 C
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15192676 1 +  23207421 T
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         3141 1 -     18090 T
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    27368 1 +     34529 C
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 4
s Bison_bison.KN261452.1                                    200426 1 -    288883 C
i Bison_bison.KN261452.1                                 C 0 I 4
s Bos_indicus.CM003047.1                                  20273630 1 +  48749331 C
i Bos_indicus.CM003047.1                                 I 83 I 37
s Bos_mutus.JH880303.1                                     1126186 1 -   1948126 C
i Bos_mutus.JH880303.1                                   C 0 I 4
s Bos_taurus.CM000203.6                                   18084268 1 +  45695690 C
i Bos_taurus.CM000203.6                                  I 83 I 37
s Bubalus_bubalis.KI419123.1                               2819936 1 +   4408762 C
i Bubalus_bubalis.KI419123.1                             C 0 I 4
s Callibella_humilis.k141_1278103                             6682 1 -     10423 C
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_737284                                227 1 -     31217 C
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                              521 1 +      5377 C
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592382 1 - 189096842 C
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1196 1 -     12329 C
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10003198 1 -  17673402 C
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2335674 1 -   7040546 C
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  403973 1 -   1652518 C
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17800125 1 -  60362399 a
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                      873 1 -     43241 a
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9035568 1 -   9314153 a
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17960044 1 -  59632846 a
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18501341 1 +  63665305 a
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18830564 1 +  46296322 C
i Capra_aegagrus.CM003241.1                              C 0 I 4
s Capra_hircus.CM004588.1                                 18061284 1 -  44709034 C
i Capra_hircus.CM004588.1                                C 0 I 4
s Capromys_pilorides.CapPil_scaffold_65020                    1953 1 -     12242 T
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6069 1 -     11696 C
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138249 1 +    179628 t
i Castor_canadensis.CasCan_scaffold_2074                 I 1 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     94495 1 +    217609 C
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                         11122 1 -     11392 C
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               7306 1 -      7577 A
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25653727 1 +  26074798 C
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                1665 1 +     28840 C
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 1394 1 +     14051 C
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Ceratotherium_simum.JH767749.1                          12232426 1 +  27778364 C
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3453 1 -     25243 C
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4476648 1 +   4669795 C
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        1150 1 +     17872 C
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           1807 1 -     14043 C
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9840 1 +     27781 C
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        10008 1 -     20310 C
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          12988 1 +     29689 C
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7734 1 -     20078 C
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          15656 1 -     27936 C
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            4522 1 -     17152 C
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38818067 1 +  39242232 C
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223756 1 -  21565898 C
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40875 1 -     53127 C
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        1126 1 +     13442 C
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15675 1 -     27947 C
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         15651 1 +     17596 C
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          1694 1 +     14005 C
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1435 1 -      8501 C
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             22029 1 -     52598 C
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           17400 1 +     57038 C
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1253828 1 +   2543920 C
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2206961                           2010 1 -     15524 C
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18429633 1 -  18827391 C
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       16069 1 -     50209 C
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135423070 1 + 135778131 C
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 19256 1 +     19366 c
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            174330 1 +    839153 C
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1911548 1 +   2368649 C
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949800 1 + 200372422 C
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              38082 1 +     84244 C
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549002 1 -  53390261 C
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1428 1 +     23735 C
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 50971 1 +     63868 C
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 1
s Crocidura_indochinensis.CroInd_scaffold_37019               3901 1 -     19598 C
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29446 1 -     87169 G
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    838020 1 +   1526836 C
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 11
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  36822 1 +     51376 A
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            64452 1 +   2246927 C
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12538232 1 -  12879189 C
i Daubentonia_madagascariensis.ctg71                     C 0 I 5
s Delphinapterus_leucas.KZ290073.1                        16812314 1 +  35494412 T
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8631066 1 +  20541912 C
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  674274 1 +   1390856 c
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    7026 1 +    198055 C
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37304 1 +     67921 C
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Echinops_telfairi.JH980293.1                            48781719 1 + 111700974 C
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.KE759718.1                                  11497 1 +     11740 C
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       311601 1 +    607251 C
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 4
s Elephantulus_edwardii.JH947257.1                         1098684 1 +  10337057 C
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16330560 1 -  41312741 A
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2146684 1 -  14770903 C
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1284531 1 +   4378816 t
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18532351 1 -  39960074 T
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               34380 1 +    498745 T
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3329215 1 -   7059049 A
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21206238 1 -  21539334 C
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11988 1 +    133382 T
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             25925 1 -     44125 T
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Eulemur_albifrons.k141_576796                              41078 1 -     44621 C
i Eulemur_albifrons.k141_576796                          C 0 C 0
s Eulemur_collaris.k141_377015                                7459 1 -     16928 C
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              16491 1 -     25546 C
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            13687 1 +     26330 C
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14922 1 +     23973 C
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                13684 1 +     75513 C
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 11614 1 +     97555 C
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                             1106 1 +     13026 C
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  5158 1 -     17153 C
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              14731 1 +    111500 C
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237906 1 + 206538554 G
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20196749 1 + 205367284 G
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 10503 1 -     36744 G
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             851359 1 +   3816255 T
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg2040                                     427545 1 -    453645 C
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             5235 1 +     11339 C
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            2533 1 +     41679 C
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               2141 1 -      9135 C
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     609565 1 -    660261 T
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 I 4
s Gorilla_beringei.k141_3596273                              17040 1 -     32273 C
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186339176 1 + 186649187 C
i Gorilla_gorilla.LT578341.1                             C 0 I 25
s Graphiurus_murinus.GraMur_scaffold_10447                   33563 1 +     78134 C
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 1
s Hapalemur_alaotrensis.k141_170648                           7786 1 -     19426 C
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12939 1 -     15286 C
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             14578 1 +     18253 C
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         14679 1 -     41752 C
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         14516 1 -     16460 C
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243285 1 +    327341 G
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18769 1 +     36099 C
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 I 4
s Heterocephalus_glaber.JH602082.1                        20663115 1 +  22651954 T
i Heterocephalus_glaber.JH602082.1                       C 0 I 12
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1846 1 +      7595 A
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       111460 1 +   1711038 C
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               42890 1 +     43066 C
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    435841 1 +    630532 C
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45991 1 +     55795 G
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 5
s Hystrix_cristata.HysCri_scaffold_5660                      84009 1 +    135385 T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7521909 1 -   7955117 t
i Ictidomys_tridecemlineatus.JH393364.1                  I 65 C 0
s Indri_indri.k141_3655594                                   23473 1 +     31101 C
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               23529 1 +     23964 T
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8278097 1 -   9596543 T
i Jaculus_jaculus.JH725527.1                             I 1 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                2886 1 -      3359 T
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    17342 1 -     42476 C
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 25
s Lemur_catta.scaffold_24                                 15525031 1 -  30322482 C
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        8961 1 +     64341 C
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           1301 1 -     35062 C
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        8988 1 +     35603 C
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    30601 1 +     38576 C
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         27305 1 +     66356 C
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         11921 1 -     23766 C
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29975 1 +     45836 C
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          2520 1 +     25010 C
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27915 1 +     54090 C
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3044020 1 +   3914936 a
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     7406 1 -     14121 C
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 308
s Lipotes_vexillifer.KE559953.1                             268580 1 -    662738 T
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1438191 1 +   1826925 C
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_399337                            15911 1 -     33856 c
i Loris_lydekkerianus.k141_399337                        C 0 C 0
s Loris_tardigradus.ctg83                                  1013622 1 +   6120653 c
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4218316 1 -  43346337 C
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17956284 1 -  59628241 a
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               8006 1 +     40492 C
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59677265 1 +  60120075 C
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13781 1 -     26193 C
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            81565 1 -    114318 C
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  7252 1 -     23192 C
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16725 1 -     29190 C
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  25290 1 +     37952 C
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186840379 1 + 187317192 C
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458942 1 -  25927173 C
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  81138 1 +     89720 C
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 8139 1 +     20474 C
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   7939 1 -     14993 C
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  330805 1 -    668171 C
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 6252 1 -     24072 C
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26877 1 -     45290 C
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91590 1 +     94391 C
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23938468 1 -  24302211 C
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352590 1 +    752769 C
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              19212 1 +    737560 T
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              51198 1 -    317179 T
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33104208 1 -  40650429 T
i Marmota_marmota.CZRN01000018.1                         I 169 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        14308 1 -    207569 C
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 6
s Mellivora_capensis.MelCap_flattened_line_69365             11271 1 +     13704 A
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    4197 1 +     10310 T
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Mico_argentatus.k141_1239457                                7118 1 -      7380 C
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_schneideri.k141_1950671                                      7091 1 -      7356 C
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18292474 1 -  93316391 C
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    24436 1 -    145209 c
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                16606 1 -     19307 C
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miopithecus_ogouensis.k141_534055                          10172 1 -     28506 C
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6887 1 -      8324 A
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                     10017 1 -     37649 C
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    27703 1 -    437263 T
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142607 1 -    366855 C
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   1646 1 +     82753 C
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 4
s Mungos_mungo.MunMun_flattened_line_23663                   36386 1 +     37127 G
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           7787 1 +     14753 C
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mustela_putorius.JH418006.1                               302669 1 -  14710649 a
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     72135 1 -     80779 T
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                281429 1 -  10118263 C
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1588684 1 -   6019432 C
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3904781 1 -   4330536 C
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                         932 1 +      1835 C
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190198 1 +    196477 C
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2035487 1 -   3037898 c
i Nannospalax_galili.KL204047.1                          C 0 I 11
s Nasalis_larvatus.k141_413338                               16176 1 +     21681 C
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308480 1 +  31847680 a
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5866660 1 +   7148211 T
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    758825 1 +    783361 C
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150346 1 -   9404916 a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102587151 1 - 196305487 C
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                             1075 1 +      2075 C
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105762506 1 + 199412804 C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1364761 1 +   3988456 C
i Ochotona_princeps.JH802162.1                           C 0 I 334
s Odobenus_rosmarus.KB229312.1                              507625 1 -   2017862 a
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          77478 1 -    150152 C
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 4
s Orcinus_orca.KB316932.1                                  2782583 1 -  10937097 T
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387              11083 1 -     18566 c
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67148265 1 + 174332312 C
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 350
s Otocyon_megalotis.JAEUCK010005147.1                       463296 1 -    559221 a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         5060 1 +      8798 C
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             697222 1 -   1103335 C
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   17586744 1 +  44047080 C
i Ovis_aries.CM001607.2                                  C 0 I 4
s Ovis_canadensis.OviCan_scaffold_2572                      174721 1 -    191736 C
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 I 4
s Pan_paniscus.KQ411613.1                                    45128 1 +     80009 C
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189144026 1 + 189151597 C
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152110 1 +    230217 G
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                265319 1 +  18783137 G
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4722199 1 -   8748460 G
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1265639 1 -   2937107 C
i Pantholops_hodgsonii.KE114653.1                        C 0 I 4
s Papio_anubis.CM001495.2                                183444268 1 + 183742232 C
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7914 1 +     20448 C
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20564726 1 +  20919399 C
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6658 1 +     41871 C
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     9951 1 +     27711 C
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                   948 1 -     11374 C
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13605 1 -     78924 G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           11051 1 +     13100 C
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             9445 1 +     25941 C
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     29020 1 -     29689 T
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               9622 1 +     63832 T
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           44667 1 +     62158 C
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        39414 1 +     89929 C
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40830 1 +     51399 C
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14297069 1 -  14605196 C
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2721 1 +     22620 C
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           35323 1 +     35617 T
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189132171 1 + 189387572 C
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9571778 1 +   9816681 C
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               74351 1 -     81375 C
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              6172 1 +     19060 C
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 14301 1 -     22811 A
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2597711 1 -   4620579 c
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     991693 1 +   2598838 C
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          30005 1 +     38485 C
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              2047 1 -     13098 C
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          27526 1 +     35766 C
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           5713 1 -     24134 C
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        29538 1 -     67325 C
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           5761 1 -      6182 C
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Pteronotus_parnellii.KE909381.1                            16115 1 -     21811 G
i Pteronotus_parnellii.KE909381.1                        C 0 I 6
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41478 1 +     42204 a
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22977731 1 +  28871421 C
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                7784 1 -      8028 C
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20275272 1 -  38429054 G
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             16158 1 -     91421 C
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7610278 1 +   7812017 C
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             16157 1 -     72585 C
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6221 1 +     55207 C
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 4
s Rhinolophus_sinicus.LVEH01000134.1                        367947 1 -   3329780 c
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             7868 1 -     11128 C
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91237217 1 - 195417433 C
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672873 1 +   7961872 C
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88773 1 -     96226 C
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_8081                                  2275 1 +     42994 C
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                              970 1 +      2253 C
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               1399 1 -      8737 C
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                              1052 1 +      2343 C
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209475929 1 + 209938924 C
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                 375 1 -      7576 C
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951998 1 - 121099817 C
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24340 1 +     46362 C
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               24435 1 +     45824 C
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             41114 1 -     64574 C
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4187 1 -     23631 C
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 24331 1 -     61129 C
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5421681 1 -   5703754 C
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          56922 1 -     80660 C
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154154 1 -    313613 C
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                         1049 1 -     12572 C
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27899 1 +     39453 C
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            8417 1 +     27826 C
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             7939 1 -     19483 C
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      1240 1 -     12762 C
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           1101 1 +     13763 C
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               4709 1 +   1910179 C
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13651955 1 -  18376816 C
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1955056 1 -   3870691 T
i Spermophilus_dauricus.KZ294078.1                       I 159 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             31949 1 +     97271 A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              19290 1 -    196729 G
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.JH118708.1                                      37354 1 -     47482 C
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                11775 1 +     41958 C
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73563 1 +    116680 C
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      119732 1 -    156842 c
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    388202 1 +    539355 c
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Theropithecus_gelada.CM009954.1                        186429586 1 + 186847797 C
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106325 1 +    114563 T
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   7325 1 +      8208 C
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     82162 1 +    610378 T
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         11990 1 -     20410 C
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      1104 1 -     12674 C
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       12091 1 +     19930 C
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       8502 1 -     19997 C
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48641 1 -     60166 C
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        16113 1 -     27529 C
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     16057 1 -     18194 C
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9769 1 -     21137 C
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    8472 1 -     10723 C
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7644 1 +      9834 C
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        25957 1 +     32220 C
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5940059 1 +   6242583 C
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        9310 1 +     20839 C
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                     579 1 +     27266 C
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 I 4
s Trichechus_manatus.JH594705.1                            4294221 1 +  10818551 C
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15738828 1 +  33153633 T
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54251 1 -     77625 C
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4851396 1 -   5085361 G
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  12370 1 +     50397 C
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             12429 1 +     24756 C
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5372724 1 -   5488506 C
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 11744 1 -     43706 a
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          2029 1 +    224448 C
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      15825 1 +     63895 T
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 1 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_3601914            175 1 +       295 T
i Ziphius_cavirostris.ZipCav_flattened_line_3601914      C 0 C 0
e Mus_pahari.LT608297.1                                   31355930 6 -  89631738 I
e Mus_spretus.CM004101.1                                  90753339 6 - 130317789 I
e Mus_musculus.chr8                                       87651276 6 - 129401213 I
e Mus_caroli.LT608237.1                                   84362283 6 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Tupaia_tana.TupTan_flattened_line_97126                    10181 0 -     10553 C
e Tupaia_chinensis.KB320699.1                              2156735 0 +   4065304 C
e Tarsius_wallacei.k141_254427                                1877 3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080 3 +     70052 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sigmodon_hispidus.SigHis_scaffold_42075                     1222 6 -     30804 I
e Rattus_norvegicus.chr16                                 53571529 6 +  90668790 I
e Psammomys_obesus.NESX01036370.1                            11313 6 -     21651 I
e Peromyscus_maniculatus.KI615324.1                       18195689 6 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Onychomys_torridus.OnyTor_scaffold_2986                    81109 7 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   26073 6 +     28053 I
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             35221 4 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1851541 4 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11261424 6 -  27267610 I
e Mesocricetus_auratus.KB708134.1                         12183131 6 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 33667 6 +    140813 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Glis_glis.GliGli_scaffold_19807                            32063 0 +     49224 C
e Ellobius_talpinus.LOJH01081419.1                            1345 6 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          21439 6 -    110024 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cricetulus_griseus.LT883664.1                           11668469 6 + 224834208 I
e Cephalopachus_bancanus.k141_1423433                         6085 3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Carlito_syrichta.NW_007259797.1                           156587 3 -    496798 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     71718 6 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       7786 26 +     62944 CCTGAAG--A----T-TT----TC-A-G-TC----TG---T------GGGG--A--C
s Acinonyx_jubatus.LLWD01001279.1                           828265 21 -   1699592 GAC--T---C----T--T----TC-A-C-AA----TT---G------GGA---A--C
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 3
s Acomys_cahirinus.AcoCah_scaffold_12655                     71724  8 +     87051 -----------------------------------TG---T------GGG---A--A
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 6 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511550 21 -  29979442 -AC--T---C----T-TT----TC-T-C-TC----TT---G------GGA---A--C
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 3
s Ailurus_fulgens.LNAC01001112.1                             80610 22 -    347723 GAC--T---C----T-TT----TC-T-C-TC----TT---A------GGA---A--C
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 2
s Allactaga_bullata.AllBul_scaffold_9566                     75437 10 -     89534 -----GA--C----T-CTT---TT-C-------------------------------
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 1
s Allenopithecus_nigroviridis.k141_3361533                   15712 26 -     52922 CCTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15632 26 -     28001 CCTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          6130 26 -     18505 CCTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           6982 26 -     12518 CCTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              8557 26 +     51355 CCTGAAG--C----T-TT----TC-A-G-CA----TG---T------GAGG--A--C
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                1666 26 -     36483 CCTGAAG--C----T-TT----TC-A-G-CA----TG---T------GAGG--A--C
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              12118 26 +     28687 CCTGAAG--C----T-TT----TC-A-G-CA----TG---T------GAGG--A--C
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                  631 26 +     27940 CCTGAAG--C----T-TT----TC-A-G-CA----TG---T------GAGG--A--C
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            1675 26 -      9457 CCTGAAG--C----T-TT----TC-A-G-CA----TG---T------GAGG--A--C
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                              631 26 +     30492 CCTGAAG--C----T-TT----TC-A-G-CA----TG---T------GAGG--A--C
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              4626 26 +     47717 CCTGAAG--C----T-TT----TC-A-G-CA----TG---T------GAGG--A--C
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              1358 26 +      5663 CCTGAAG--C----T-TT----TC-A-G-CA----TG---T------GAGG--A--C
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             15810 26 +     50774 CCTGAAG--C----T-TT----TC-A-G-CA----TG---T------GAGG--A--C
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          676451 19 -   2318259 --------------T-TT----TC-A-T-TA----CT---G------GCG---ATGC
i Ammotragus_lervia.NIVO01071767.1                       I 4 I 1
s Anoura_caudifer.AnoCau_scaffold_1412                      186319 23 +    412891 AGG--AC--T----C-TT----TC-A-C-TA----TT---G------GGa---a--a
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 3
s Antilocapra_americana.AntAmePen_scaffold_12469             98932 19 -    100397 --------------T-TT----TC-A-T-TA----CT---T------GTG---GTGC
i Antilocapra_americana.AntAmePen_scaffold_12469         I 4 I 1
s Aotus_azarae.k141_3104676                                  16799 26 -     33861 CCTGAAG--C----T-TT----TC-A-G-TA----TG---T------GAGG--A--C
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            16796 26 -     34016 CCTGAAG--C----T-TT----TC-A-G-TA----TG---T------GAGG--A--C
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299223 26 -   5030052 CCTGAAG--C----T-TT----TC-A-G-TA----TG---T------GAGG--A--C
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             16832 26 -     34685 CCCGAAG--C----T-TT----TC-A-G-TA----TG---T------GAGG--A--C
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               29957 26 -     47192 CCCGAAG--C----T-TT----TC-A-G-TA----TG---T------GAGG--A--C
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13566 13 +     20879 -----GACCC----T-TT----TCAC-C-----------------------------
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 1 I 8
s Arctocebus_calabarensis.k141_2318572                       12243 26 +     14667 ACT--GA--T-T-CT-TT----TT-A-CTCT----AT---G------CAA---A--C
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5701 23 +     43469 AGG--AC--T----C-TT----TC-A-T-TA----TT---G------GGA---A--A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 3
s Avahi_laniger.k141_765380                                  54651 26 -     92717 ACT--GA--T-T-CT-TT----TC-T-CTGT----GG---A------GGA---A--C
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              55282 26 +     85213 ACT--GA--T-T-CT-TT----TC-T-CTGT----GG---A------GGA---A--C
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15192677 25 +  23207421 AGA--CT--C----T-TT----TT-A-C-TA----TT---G------AGG---ACGT
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 1
s Balaenoptera_bonaerensis.DF707048.1                         3142 25 -     18090 AGA--CT--C----T-TT----TT-A-C-TA----TT---G------AGG---ACGT
i Balaenoptera_bonaerensis.DF707048.1                    C 0 I 1
s Beatragus_hunteri.BeaHun_scaffold_50177                    27373 19 +     34529 --------------T-TT----TC-A-C-TA----CT---G------GCG---ATGC
i Beatragus_hunteri.BeaHun_scaffold_50177                I 4 I 1
s Bison_bison.KN261452.1                                    200431 19 -    288883 --------------T-TT----TC-A-T-TA----CT---G------GCG---ATGC
i Bison_bison.KN261452.1                                 I 4 I 1
s Bos_indicus.CM003028.1                                  18363335 19 - 116941312 --------------T-TT----TC-A-T-TA----CT---G------GCG---ATGC
i Bos_indicus.CM003028.1                                 I 5 I 1
s Bos_mutus.JH880303.1                                     1126191 19 -   1948126 --------------T-TT----TC-A-T-TA----CT---G------GCG---ATGC
i Bos_mutus.JH880303.1                                   I 4 I 1
s Bos_taurus.CM000184.6                                   18200309 19 - 114055384 --------------T-TT----TC-A-T-TA----CT---G------GCG---ATGC
i Bos_taurus.CM000184.6                                  I 5 I 1
s Bubalus_bubalis.KI419123.1                               2819941 19 +   4408762 --------------T-TT----TC-A-T-TA----CT---G------GCA---ATGC
i Bubalus_bubalis.KI419123.1                             I 4 I 1
s Callibella_humilis.k141_1278103                             6683 26 -     10423 CCTGAAG--C----T-TC----TC-G-G-TA----TG---T------GAGG--A--C
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_737284                                228 26 -     31217 CCTGAAG--C----T-TT----TC-A-G-TA----TG---T------GAGG--A--C
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                              522 26 +      5377 CCTGAAG--C----T-TT----TC-G-G-TA----TG---T------GAGG--A--C
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592383 26 - 189096842 CCTGAAG--C----T-TT----TC-G-G-TA----TG---T------GAGG--A--C
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1197 26 -     12329 CCTGAAG--C----T-TT----TC-G-G-TA----TG---T------GAGG--A--C
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10003199 19 -  17673402 --------------T-TT----TC-A-C-TA----GT---G------GGG-ACA--T
i Camelus_bactrianus.KN276810.1                          C 0 I 1
s Camelus_dromedarius.KN272107.1                           2335675 19 -   7040546 --------------T-TT----TC-A-C-TA----GT---G------GGG-ACA--T
i Camelus_dromedarius.KN272107.1                         C 0 I 1
s Camelus_ferus.KB017975.1                                  403974 19 -   1652518 --------------T-TT----TC-A-C-TA----GT---G------GGG-ACA--T
i Camelus_ferus.KB017975.1                               C 0 I 1
s CanFam4.chr16                                           17800126 22 -  60362399 aat--t---c----t-tt----tt-t-c-tc----tt---g------gga---a--c
i CanFam4.chr16                                          C 0 I 3
s Canis_lupus_VD.CanFam_VD_scaffold_27089                      874 22 -     43241 aat--t---c----t-tt----tt-t-c-tc----tt---g------gga---a--c
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 I 3
s Canis_lupus_dingo.QKWQ01000480.1                         9035569 22 -   9314153 aat--t---c----t-tt----tt-t-c-tc----tt---g------gga---a--c
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 3
s Canis_lupus_familiaris.chr16                            17960045 22 -  59632846 aat--t---c----t-tt----tt-t-c-tc----tt---g------gga---a--c
i Canis_lupus_familiaris.chr16                           C 0 I 3
s Canis_lupus_orion.HG994398.1                            18501342 22 +  63665305 aat--t---c----t-tt----tt-t-c-tc----tt---g------gga---a--c
i Canis_lupus_orion.HG994398.1                           C 0 I 3
s Capra_aegagrus.CM003241.1                               18830569 19 +  46296322 --------------T-TT----TC-A-T-TA----CT---G------GCG---ATGC
i Capra_aegagrus.CM003241.1                              I 4 I 1
s Capra_hircus.CM004588.1                                 18061289 19 -  44709034 --------------T-TT----TC-A-T-TA----CT---G------GCG---ATGC
i Capra_hircus.CM004588.1                                I 4 I 1
s Capromys_pilorides.CapPil_scaffold_65020                    1954 14 -     12242 -----GA--C----T-CTTTTCAC-C-A-----------------------------
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 8
s Carollia_perspicillata.CarPer_scaffold_92756                6070 23 -     11696 AGG--AC--T----C-TT----TC-A-C-TG----CT---G------GGG---A--G
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 3
s Castor_canadensis.CasCan_scaffold_2074                    138250 14 +    179628 -----ga--c----t-cttttcac-t-c-----------------------------
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 8
s Catagonus_wagneri.CatWag_scaffold_2839                     94496 25 +    217609 AGA--CT--C----T-TT----TC-C-C-TG----TT---G------GGA---ACAT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 1
s Cebuella_niveiventris.k141_1251222                         11123 26 -     11392 CCTGAAG--C----T-TT----TC-G-G-TA----TG---T------GAGG--A--C
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               7307 26 -      7577 CCTGAAG--C----T-TT----TC-G-G-TA----TG---T------GAGG--A--C
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25653728 26 +  26074798 CCTGAGG--C----C-TT----TC-A-G-TG----CG---T------GAGG--A--C
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                1666 26 +     28840 CCTGAGG--C----C-TT----TC-A-G-CG----CG---T------GAGG--A--C
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 1395 26 +     14051 CCTGAGG--C----C-TT----TC-A-G-TG----CG---T------GAGG--A--C
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Ceratotherium_simum.JH767749.1                          12232427 23 +  27778364 CGA--CT--C----T-TT----TC-A-C-TG----TT---G------GGA---A--C
i Ceratotherium_simum.JH767749.1                         C 0 I 3
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3454 23 -     25243 CGA--CT--C----T-TT----TC-A-C-TG----TT---G------GGA---A--C
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 I 3
s Cercocebus_atys.KQ010504.1                               4476649 26 +   4669795 CCTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        1151 26 +     17872 CTTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           1808  4 -     14043 CTTG-----------------------------------------------------
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9841 26 +     27781 CTTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        10009 26 -     20310 CCTGAAA--C----G-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          12989 26 +     29689 CCTGAAA--C----G-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7735 26 -     20078 CCTGAAA--C----T-TT----TC-A-G-TA----TG---C------GGGG--A--C
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          15657 26 -     27936 CCTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            4523 26 -     17152 CCTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38818068 26 +  39242232 CCTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223757 26 -  21565898 CCTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40876 26 -     53127 CCTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        1127 26 +     13442 CCTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15676 26 -     27947 CCTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         15652 26 +     17596 CCTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          1695 26 +     14005 CCTGAAA--C----T-TT----TC-A-G-TA----TG---C------GGGG--A--C
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1436  8 -      8501 ATG--CT--C----T-C----------------------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             22030 26 -     52598 ACT--GA--T-T-CT-TT----TC-T-CTGT----GG---A------GGA---A--A
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           17401 26 +     57038 ACT--GA--T-T-CT-TT----TT-T-CTGT----GG---A------GGA---A--C
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1253829 14 +   2543920 -----AA--C----T-CTCTTCAC-C-A-----------------------------
i Chinchilla_lanigera.JH722012.1                         C 0 I 8
s Chiropotes_albinasus.k141_2206961                           2011 13 -     15524 CCTGAAG--C----T-TT----TC---------------------------------
i Chiropotes_albinasus.k141_2206961                      C 0 I 9
s Chlorocebus_aethiops.ctg25                              18429634 26 -  18827391 CCTGAAA--C----T-AT----TC-A-G-TA----TG---T------GGGG--A--C
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       16070 26 -     50209 CCTGAAA--C----T-AT----TC-A-G-TA----TG---T------GGGG--A--C
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135423071 26 + 135778131 CCTGAAA--C----T-AT----TC-A-G-TA----TG---T------GGGG--A--C
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 19257 23 +     19366 aaa--ct--C----T-CT----TC-A-T-TC----TG---T------GGG---C--A
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            174331 23 +    839153 AAA--CT--C----T-CT----TC-A-T-TC----TG---T------GGG---C--A
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1911549 26 +   2368649 CCTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGA--A--C
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949801 26 + 200372422 CCTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGA--A--C
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              38083 26 +     84244 CCTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGA--A--C
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549003 22 -  53390261 TGA--CG--G----T-TT----TC-A-C-CA----TG---T------GG----A--A
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1429 26 +     23735 AGA--CT--C----T-TT----TC-A-C-TA----TTATAG------GGA---A--T
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 I 3
s Cricetulus_griseus.LT883664.1                           11668475  8 + 224834208 -----------------------------------TG---T------GGG---A--C
i Cricetulus_griseus.LT883664.1                          I 6 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 50973 14 +     63868 -----GA--CCTTTT-TC----AC-A-C-----------------------------
i Cricetomys_gambianus.CriGam_scaffold_18520             I 1 I 8
s Crocidura_indochinensis.CroInd_scaffold_37019               3902 23 -     19598 TCA--AA--T----A-TT----TT-G-C-TA----CA---T------AGA---A--A
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29447 22 -     87169 GAC--T---C----T-TT----TC-A-C-TT----TG---G------GGA---A--C
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 3
s Ctenodactylus_gundi.CteGun_scaffold_65                    838032  8 +   1526836 -----------------------------------TG---T------GGG---A--A
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 11 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  36823 12 +     51376 -----GA--C----T-CTT--CAC-C-A-----------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 8
s Daubentonia_madagascariensis.ctg71                      12538238 15 -  12879189 -----------------------C-T-CTTT----GT---G------GGG-A-A--A
i Daubentonia_madagascariensis.ctg71                     I 5 C 0
s Dasypus_novemcinctus.JH564415.1                            64453  8 +   2246927 ATG--CT--C----T-C----------------------------------------
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16812315 25 +  35494412 GCA--CT--C----T-TT----TC-A-C-TA----CT---G------AGG---ACGT
i Delphinapterus_leucas.KZ290073.1                       C 0 I 1
s Desmodus_rotundus.KZ672289.1                             8631067 23 +  20541912 AGG--AC--T----C-TT----TC-A-C-TA----CT---G------GGA---A--A
i Desmodus_rotundus.KZ672289.1                           C 0 I 3
s Dicerorhinus_sumatrensis.PEKH010002091.1                  674275 23 +   1390856 cca--ct--c----t-tt----tc-a-c-tg----tt---g------gga---a--c
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 3
s Diceros_bicornis.DicBicMic_scaffold_5955                    7027 23 +    198055 CGA--CT--C----T-TT----TC-G-C-TG----TT---G------GGA---A--C
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 3
s Dinomys_branickii.DinBra_scaffold_21862                    37305 14 +     67921 -----GA--C----T-CTCTTCAC-C-A-----------------------------
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 8
s Echinops_telfairi.JH980293.1                            48781720 23 + 111700974 TAA--CT--C----T-CT----TC-T-C-CA----TA---C------GGG---C--C
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.KE759718.1                                  11498 23 +     11740 AAA--CT--C----T-TT----TA-A-C-TA----CT---G------GGA---A--c
i Eidolon_helvum.KE759718.1                              C 0 I 3
s Elaphurus_davidianus.JRFZ01104969.1                       311606 19 +    607251 --------------T-TT----TC-A-T-TA----CT---G------GGG---ATGT
i Elaphurus_davidianus.JRFZ01104969.1                    I 4 I 1
s Elephantulus_edwardii.JH947257.1                         1098685 23 +  10337057 TAG--TG--T----T-CT----TC-A-C-TG----TG---T------AGA---C--C
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          21445  8 -    110024 -----------------------------------TG---T------GGG---A--A
i Ellobius_lutescens.LOEQ01008920.1                      I 6 C 0
s Ellobius_talpinus.LOJH01081419.1                            1351  8 +      8657 -----------------------------------TG---T------GGG---A--A
i Ellobius_talpinus.LOJH01081419.1                       I 6 C 0
s Enhydra_lutris.KZ291758.1                               16330561 22 -  41312741 GAC--T---C----T-TT----TC-T-C-TC----TT---G------GGA---A--C
i Enhydra_lutris.KZ291758.1                              C 0 I 3
s Eptesicus_fuscus.JH977646.1                              2146685 22 -  14770903 AGG--AA--T----C-T-----TC-A-C-TA----TT---G-----G-GA---A--A
i Eptesicus_fuscus.JH977646.1                            C 0 I 3
s Equus_asinus.JREZ01000139.1                              1284532 23 +   4378816 cag--tt--c----t-at----tc-a-c-ta----tt---g------gga---a--c
i Equus_asinus.JREZ01000139.1                            C 0 I 3
s Equus_caballus.CM000403.2                               18532352 23 -  39960074 CAG--TT--C----T-AT----TC-A-C-TA----TT---G------GGA---A--C
i Equus_caballus.CM000403.2                              C 0 I 3
s Equus_przewalskii.KK951119.1                               34381 23 +    498745 CAG--TT--C----T-AT----TC-A-C-TA----TT---G------GGA---A--C
i Equus_przewalskii.KK951119.1                           C 0 I 3
s Erinaceus_europaeus.JH835339.1                           3329216 29 -   7059049 TGA--TT--A----T-TT----CA-A-T-TT----TA---CTATATAAGA---A--T
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21206239 26 -  21539334 CCTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           11989 25 +    133382 AGA--CT--C----T-TT----TC-A-C-TA----TT---G------AGG---ATGT
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 1
s Eubalaena_japonica.EubJap_flattened_line_31514             25926 25 -     44125 AGA--CT--C----T-TT----TC-A-C-TA----TC---G------AGG---ACGT
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 I 1
s Eulemur_albifrons.k141_576796                              41079 26 -     44621 ATT--GA--T-T-CT-TT----TC-T-CTGT----GG---A------GGA---A--C
i Eulemur_albifrons.k141_576796                          C 0 C 0
s Eulemur_collaris.k141_377015                                7460 26 -     16928 ATT--GA--T-T-CT-TT----TC-T-CTGT----GG---A------GGA---A--C
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              16492 26 -     25546 ATT--GA--T-T-CT-TT----TC-T-CTGT----GG---A------GGA---A--C
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            13688 26 +     26330 ATT--GA--T-T-CT-TT----TC-T-CTGT----GG---A------GGA---A--C
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14923 26 +     23973 ATT--GA--T-T-CT-TT----TC-T-CTGT----GG---A------GGA---A--C
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                13685 26 +     75513 ATT--GA--T-T-CT-TT----TC-T-CTGT----GG---A------GGA---A--C
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 11615 26 +     97555 ATT--GA--T-T-CT-TT----TC-T-CTGT----GG---A------GGA---A--C
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                             1107 26 +     13026 ACT--GA--T-T-CT-TT----CC-T-CTGT----GG---A------GGA---A--C
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  5159 26 -     17153 ATT--GA--T-T-CT-TT----TC-T-CTGT----GG---A------GGA---A--C
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              14732 26 +    111500 ATT--GA--T-T-CT-TT----TC-T-CTGT----GG---A------GGA---A--C
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237907 21 + 206538554 GAC--T---C----T--T----TC-A-C-AG----TT---G------GGA---A--C
i Felis_catus.CM001381.2                                 C 0 I 3
s Felis_catus_fca126.CM031415.1                           20196750 21 + 205367284 GAC--T---C----T--T----TC-A-C-AG----TT---G------AGA---A--C
i Felis_catus_fca126.CM031415.1                          C 0 I 3
s Felis_nigripes.FelNig_flattened_line_20823                 10504 21 -     36744 GAC--T---C----T--T----TC-A-C-AG----TT---G------GGA---A--C
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 3
s Fukomys_damarensis.KN121974.1                             851360 14 +   3816255 -----GA--C----G-CTGGTCAC-C-A-----------------------------
i Fukomys_damarensis.KN121974.1                          C 0 I 8
s Galago_moholi.ctg2040                                     427546 26 -    453645 ACT--GA--T-T-CT-TT----TT-A-TTCT----AT---G------CAA---A--T
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             5236 26 +     11339 ACT--GA--T-T-CT-TT----TT-A-TTCT----AT---G------CAA---A--T
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            2534 26 +     41679 ACT--GA--T-T-CT-TT----TT-A-CTCT----AT---G------CAA---A--T
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               2142 22 -      9135 CCG--GG--C----T-TT----TC-A-C-GG----TG---T------GG----C--A
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     609570 19 -    660261 --------------T-TT----TC-A-T-TA----CT---G------GCG---GTGC
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 4 I 1
s Gorilla_beringei.k141_3596273                              17041 26 -     32273 CCTGAAG--A----T-TT----TC-A-G-TC----TG---T------GGGG--A--C
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.CYUI03001204.1                             14637 26 -     63219 CCTGAAG--A----T-TT----TC-A-G-TC----TG---T------GGGG--A--C
i Gorilla_gorilla.CYUI03001204.1                         I 581 I 2639
s Graphiurus_murinus.GraMur_scaffold_10447                   33565 12 +     78134 -----GA--C----T-CT----TCACCC-----------------------------
i Graphiurus_murinus.GraMur_scaffold_10447               I 1 I 8
s Hapalemur_alaotrensis.k141_170648                           7787 26 -     19426 ACT--GA--TC--CT-TT----TC-T-CTGT----GG---A------GGA---A--C
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12940 26 -     15286 ACT--GA--TC--CT-TT----TC-T-CTGT----GG---A------GGA---A--C
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             14579 26 +     18253 ACT--GA--TC--CT-TT----TC-T-CTGT----GG---A------GGA---A--C
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         14680 26 -     41752 ACT--GA--TC--CT-TT----TC-T-CTGT----GG---A------GGA---A--C
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         14517 26 -     16460 ACT--GA--TC--CT-TT----TC-T-CTGT----GG---A------GGA---A--C
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243286 22 +    327341 GGC--T---C----T-TT----TC-A-C-TA----TT---G------GGG---A--C
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 3
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18774 19 +     36099 --------------T-TT----TC-A-T-TA----CT---G------GCG---ATGC
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 4 I 1
s Heterocephalus_glaber.JH602082.1                        20663128  8 +  22651954 -----------------------------------TG---T------GGA---A--T
i Heterocephalus_glaber.JH602082.1                       I 12 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1847 23 +      7595 TCA--CT--C----T-CG----TC-A-C-CG----AG---T------GGG---C--A
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       111461 23 +   1711038 TGA--CT--C----T-TT----TC-A-C-TA----TT---G------GGG---A--C
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 3
s Hipposideros_galeritus.HipGal_scaffold_29171               42891 23 +     43066 GTA--CT--C----T-TT----TC-A-C-TA----CT---G------GGG---A--C
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 I 3
s Hoolock_leuconedys.ctg274                                    435842 26 +    630532 CCTGAAG--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  45997 14 +     55795 ----------------------TC-A-C-TA----CT---G------GGA---A--C
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 5 I 3
s Hystrix_cristata.HysCri_scaffold_5660                      84010 14 +    135385 -----AA--C----T-CTTTCCAC-C-A-----------------------------
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 8
s Ictidomys_tridecemlineatus.JH393364.1                    7521910 11 -   7955117 -----gc--c----t-ct----tcac-c-----------------------------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 8
s Indri_indri.k141_3655594                                   23474 26 +     31101 ACT--GA--T-T-CT-TT----TC-T-CTGT----GG---A------GGA---A--C
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               23530 25 +     23964 GGA--CT--C----T-TT----TC-A-C-TA----CT---G------AGG---ATCT
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 I 1
s Jaculus_jaculus.JH725527.1                               8278098 10 -   9596543 -----GA--C----T-CTT---TT-C-------------------------------
i Jaculus_jaculus.JH725527.1                             C 0 I 1
s Kogia_breviceps.KogBre_flattened_line_192630                2887 25 -      3359 AGA--CT--C----T-TT----TC-A-C-TA----CT---G------AGG---ACGT
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 I 1
s Lasiurus_borealis.LasBor_scaffold_50988                    16104 21 +     29960 -GG--AA--T----C-T-----TC-A-C-TA----TT---G-----G-GG---A--A
i Lasiurus_borealis.LasBor_scaffold_50988                I 32 I 56
s Lemur_catta.scaffold_24                                 15525032 26 -  30322482 ACT--GA--T-T-CT-TT----TC-T-CTGT----GG---A------GGA---A--C
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        8962 26 +     64341 CCTGAAG--C----T-TT----TC-A-G-TA----TG---T------GAGG--A--C
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           1302 26 -     35062 CCTGAAG--C----T-TT----TT-A-G-TA----TG---T------GAGG--A--C
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        8989 26 +     35603 CCTGAGG--C----T-TT----TC-A-G-TA----TG---T------GAGG--A--C
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    30602 26 +     38576 CCTGAAG--C----T-TT----TC-A-G-TA----TG---T------GAGG--A--C
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         27306 26 +     66356 CCTGAAG--C----T-TT----TC-A-G-TA----TG---T------GAGG--A--C
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         11922 26 -     23766 ACT--GA--T-T-CT-TT----TC-T-CTGT----GG---A------GGA---A--C
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             29976 26 +     45836 ACT--GA--T-T-CT-TT----TC-T-CTGT----GG---A------GGA---A--C
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          2521 26 +     25010 ACT--GA--T-T-CT-TT----TC-T-CTGT----GG---A------GGA---A--C
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27916 26 +     54090 ACT--GA--T-T-CT-TT----TC-T-CTGT----GG---A------GGA---A--C
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3044021 23 +   3914936 aac--t---c----cttt----ac-t-c-tc----tt---g------gga---a--c
i Leptonychotes_weddellii.KB714746.1                     C 0 I 3
s Lepus_americanus.LepAme_scaffold_107385                     7715 25 -     14121 CCT--GA--C-T-CT-TT----TC-A-C-TT----GG---T------GGG---A--A
i Lepus_americanus.LepAme_scaffold_107385                I 308 C 0
s Lipotes_vexillifer.KE559953.1                             268581 25 -    662738 GGA--CT--C----T-TT----TC-A-C-TA----CT---G------AGG---ACGT
i Lipotes_vexillifer.KE559953.1                          C 0 I 1
s Lophocebus_aterrimus.ctg367                              1438192 26 +   1826925 CCTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_399337                            15912 26 -     33856 act--ga--t--tct-tt----tt-a-ctct----at---g------CAA---A--C
i Loris_lydekkerianus.k141_399337                        C 0 C 0
s Loris_tardigradus.ctg83                                  1013623 26 +   6120653 act--ga--t--tct-tt----tt-a-ctct----at---g------caa---a--C
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4218317 23 -  43346337 TTA--GT--C----T-CT----CC-A-C-TG----AG---T------GGG---C--A
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17956285 22 -  59628241 aat--t---c----t-tt----tt-t-c-tc----tt---g------gga---a--c
i Lycaon_pictus.CM007581.1                               C 0 I 3
s Macaca_arctoides.k141_2326796                               8007 26 +     40492 CCTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59677266 26 +  60120075 CCTGAAA--C----T-TG----TC-A-G-TA----TG---T------GGGG--A--C
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13782 26 -     26193 CCTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            81566 26 -    114318 CCTGAAA--C----T-TT----TC-A-G-TA----TA---T------GGGG--A--C
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  7253 26 -     23192 CCTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16726 26 -     29190 CCTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  25291 26 +     37952 CCTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186840380 26 + 187317192 CCTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458943 26 -  25927173 CCTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  81139 26 +     89720 CCTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 8140 26 +     20474 CCTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   7940 26 -     14993 CCTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  330806 26 -    668171 CCTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 6253 26 -     24072 CCTGAAA--C----T-TG----TC-A-G-TA----TG---T------GGGG--A--C
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26878 26 -     45290 CCTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91591 23 +     94391 AAA--CC--C----T-TT----TC-A-C-TA----CT---G------GGA---c--c
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 3
s Mandrillus_leucophaeus.scaffold280                      23938469 26 -  24302211 CCTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352591 26 +    752769 CCTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              19213 21 +    737560 GGA--C---T----C-T-----TC-A-G-TA----CT---G------GGA---A--C
i Manis_javanica.JSZB01003497.1                          C 0 I 3
s Manis_pentadactyla.KN006162.1                              51199 21 -    317179 GGA--C---T----C-T-----TC-A-C-TA----CT---G------GGA---A--C
i Manis_pentadactyla.KN006162.1                          C 0 I 3
s Marmota_marmota.CZRN01000018.1                          33104209 11 -  40650429 -----GC--C----T-CT----TCAC-C-----------------------------
i Marmota_marmota.CZRN01000018.1                         C 0 I 8
s Megaderma_lyra.MegLyr_scaffold_4542                        14315 15 -    207569 -----------------T----GC-A-C-TA----TT---G------GGA---G--C
i Megaderma_lyra.MegLyr_scaffold_4542                    I 6 I 3
s Mellivora_capensis.MelCap_flattened_line_69365             11272 22 +     13704 GAC--T---C----T-TT----TC-T-C-TC----TT---G------GGA---A--C
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 3
s Meriones_unguiculatus.MerUng_scaffold_7390                 33673  8 +    140813 -----------------------------------TG---T------GGG---A--A
i Meriones_unguiculatus.MerUng_scaffold_7390             I 6 C 0
s Mesocricetus_auratus.KB708134.1                         12183137  8 -  29670104 -----------------------------------TG---T------Ggg---a--a
i Mesocricetus_auratus.KB708134.1                        I 6 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    4198 25 +     10310 GGA--CT--C----T-TT----TC-A-C-TA----CT---G------AGG---ACGT
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 I 1
s Mico_argentatus.k141_1239457                                7119 26 -      7380 CCTGAAG--C----T-TT----TC-G-G-TA----TG---T------GAGG--A--C
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_schneideri.k141_1950671                                      7092 26 -      7356 CCTGAAG--C----T-TT----TC-G-G-TA----TG---T------GAGG--A--C
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18292475 26 -  93316391 ACT--AA--T-T-CT-CT----TC-T-CTGT----GG---A------GGA---A--C
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    24437 23 -    145209 tAA--CT--C----C-CG----TC-T-C-CA----TA---T------GGG---C--A
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                16607 23 -     19307 AGG--AC--T----C-TT----TC-A-C-TA----CC---A------GGA---A--A
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 3
s Microtus_ochrogaster.CM001695.1                         11261430  8 -  27267610 -----------------------------------TG---T------GAG---A--A
i Microtus_ochrogaster.CM001695.1                        I 6 C 0
s Miopithecus_ogouensis.k141_534055                          10173 26 -     28506 CCTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6888 23 -      8324 AAC--T---C----CTTT----AC-T-C-TC----TT---G------GGA---A--C
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 3
s Mirza_zaza.k141_952172                                     10018 26 -     37649 ACT--GA--T-T-CT-TT----TA-T-CTGT----GG---A------GGA---A--C
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    27704 25 -    437263 GCA--CT--C----T-TT----TC-A-C-TA----CT---G------AGG---ACGT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 1
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142608 24 -    366855 AGA--AC--C----C-TT----TC-A-C-TA----CT---G------GGA-A-A--A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 3
s Moschus_moschiferus.MosMos_scaffold_13123                   1651 19 +     82753 --------------T-TT----TC-A-T-TA----CT---G------GCA---ATGC
i Moschus_moschiferus.MosMos_scaffold_13123              I 4 I 1
s Mungos_mungo.MunMun_flattened_line_23663                   36387 11 +     37127 GGC--T---C----T-TT----TC-A-------------------------------
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 7
s Murina_feae.MurFea_scaffold_85699                           7788 22 +     14753 AGG--AC--T----C-T-----TC-A-C-TA----GT---G-----G-GA---A--A
i Murina_feae.MurFea_scaffold_85699                      C 0 I 3
s Mus_caroli.LT608237.1                                   84362289  8 - 120012414 -----------------------------------TG---T------GGG---A--A
i Mus_caroli.LT608237.1                                  I 6 C 0
s Mus_musculus.chr8                                       87651282  8 - 129401213 -----------------------------------TG---T------GGG---A--A
i Mus_musculus.chr8                                      I 6 C 0
s Mus_pahari.LT608297.1                                   31355936  8 -  89631738 -----------------------------------TG---T------GGG---A--A
i Mus_pahari.LT608297.1                                  I 6 C 0
s Mus_spretus.CM004101.1                                  90753345  8 - 130317789 -----------------------------------TG---T------GGG---A--A
i Mus_spretus.CM004101.1                                 I 6 C 0
s Mustela_putorius.JH418006.1                               302670 22 -  14710649 gac--t---c----t-tt----tc-t-c-tc----tt---g------ggA---A--C
i Mustela_putorius.JH418006.1                            C 0 I 3
s Myocastor_coypus.MyoCoy_scaffold_10123                     72136 14 -     80779 -----GA--C----T-CTTGTCAC-C-A-----------------------------
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 I 8
s Myotis_brandtii.KE162005.1                                281430 22 -  10118263 AGG--AC--T----C-T-----TC-A-C-TA----TT---G-----G-GA---A--A
i Myotis_brandtii.KE162005.1                             C 0 I 3
s Myotis_davidii.KB100139.1                                1588685 22 -   6019432 AGG--GC--T----C-T-----TC-A-C-TA----TT---G-----G-GA---A--A
i Myotis_davidii.KB100139.1                              C 0 I 3
s Myotis_lucifugus.GL429869.1                              3904782 22 -   4330536 AGG--AC--T----C-T-----TC-A-C-TA----TT---G-----G-GA---A--A
i Myotis_lucifugus.GL429869.1                            C 0 I 3
s Myotis_myotis.MyoMyo_scaffold_281845                         933 22 +      1835 AGG--GC--T----C-T-----TC-A-C-TA----TT---G-----G-GA---A--A
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 I 3
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190199 23 +    196477 CAA--CT--C----T-CT----TC-A-C-TG----TG---T------GGG---A--A
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2035499  8 -   3037898 -----------------------------------TG---T------AGA---A--C
i Nannospalax_galili.KL204047.1                          I 11 C 0
s Nasalis_larvatus.k141_413338                               16177 25 +     21681 CCTGAAA--C----T-TT----TC-A-G--A----TG---T------GGGG--A--T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308481 23 +  31847680 aac--t---c----cttt----ac-t-c-tc----tt---g------gga---a--c
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 3
s Neophocaena_asiaeorientalis.KZ687982.1                   5866661 25 +   7148211 GGA--CT--C----T-TT----TC-A-C-TA----CT---G------AGG---ACGT
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 1
s Noctilio_leporinus.NocLep_scaffold_251                    758826 23 +    783361 AGG--AC--A----C-TT----TC-A-T-TA----TT---G------GGA---A--A
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 3
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150347 22 -   9404916 aat--t---c----t-tt----tt-t-c-tc----tt---g------gga---a--c
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 3
s Nycticebus_bengalensis.LG01                            102587152 26 - 196305487 ACT--GA--T-T-CT-TT----TT-A-CTCT----AT---G------CAA---A--C
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                             1076 26 +      2075 ACT--GA--T-T-CT-TT----TT-A-CTCT----AT---G------CAA---A--C
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105762507 26 + 199412804 ACT--GA--T-T-CT-TT----TT-A-CTCT----AT---G------CAA---A--C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1365096 23 +   3988456 TCT--GA--C----T-TT----TC-A-C-TA----CG---T------GGG---A--A
i Ochotona_princeps.JH802162.1                           I 334 I 47
s Odobenus_rosmarus.KB229312.1                              507626 23 -   2017862 aac--t---c----cttt----ac-t-c-tc----tt---g------gga---a--c
i Odobenus_rosmarus.KB229312.1                           C 0 I 3
s Okapia_johnstoni.LVCL01S0005463.1                          77483 19 -    150152 --------------T-TT----TC-A-T-TA----CT---G------GCG---GTGC
i Okapia_johnstoni.LVCL01S0005463.1                      I 4 I 1
s Ondatra_zibethicus.OndZib_scaffold_46174                   26079  8 +     28053 -----------------------------------TG---T------GGG---A--G
i Ondatra_zibethicus.OndZib_scaffold_46174               I 6 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    81116  8 +    102263 -----------------------------------TG---T------GGA---A--A
i Onychomys_torridus.OnyTor_scaffold_2986                I 7 C 0
s Orcinus_orca.KB316932.1                                  2782584 25 -  10937097 GGA--CT--C----T-TT----TC-A-C-TA----CT---G------AGG---ACAT
i Orcinus_orca.KB316932.1                                C 0 I 1
s Orycteropus_afer.OryAfe_flattened_line_144387              11084 23 -     18566 taa--ct--c----t-ct----tc-a-t-tg----tg---t------agg---t--a
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67148616 25 + 174332312 CCT--GA--C-T-CT-TT----TC-A-T-TT----GG---T------GGG---A--A
i Oryctolagus_cuniculus.CM000791.1                       I 350 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       463297 22 -    559221 aat--t---c----t-tt----tt-t-c-tc----tt---g------gga---a--c
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 3
s Otolemur_crassicaudatus.k141_222918                         5061 26 +      8798 ACT--GA--T-T-CT-TT----TT-A-CTCT----AT---G------CAA---A--T
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             697223 26 -   1103335 ACT--GA--T-T-CT-TT----TT-A-CTCT----AT---G------CAA---A--T
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   17586749 19 +  44047080 --------------T-TT----TC-A-T-TA----CT---G------GCG---ATGC
i Ovis_aries.CM001607.2                                  I 4 I 1
s Ovis_canadensis.OviCan_scaffold_2572                      174726 19 -    191736 --------------T-TT----TC-A-T-TA----CT---G------GCG---ATGC
i Ovis_canadensis.OviCan_scaffold_2572                   I 4 I 1
s Pan_paniscus.KQ411613.1                                    45129 26 +     80009 CCTGAAG--A----T-TT----TC-A-G-TC----TG---T------GGGG--A--C
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189144027 26 + 189151597 CCTGAAG--A----T-TT----TC-A-G-TC----TG---T------GGGG--A--C
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152111 22 +    230217 GAC--T---C----T-TT----TC-A-C-AA----TT---G------GGA---A--C
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 3
s Panthera_pardus.KV860321.1                                265320 22 +  18783137 GAC--T---C----T-TT----TC-A-C-AA----TT---G------GGA---A--C
i Panthera_pardus.KV860321.1                             C 0 I 3
s Panthera_tigris.KE722367.1                               4722200 22 -   8748460 GAC--T---C----T-TT----TC-A-C-AA----TT---G------GGA---A--C
i Panthera_tigris.KE722367.1                             C 0 I 3
s Pantholops_hodgsonii.KE114653.1                          1265644 19 -   2937107 --------------T-TT----TC-A-T-TA----CT---G------GTG---ATGC
i Pantholops_hodgsonii.KE114653.1                        I 4 I 1
s Papio_anubis.CM001495.2                                183444269 26 + 183742232 CCTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7915 26 +     20448 CCTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20564727 26 +  20919399 CCTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6659 26 +     41871 CCTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     9952 26 +     27711 CCTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                   949 26 -     11374 CCTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13606 22 -     78924 GAC--T---C----T-TT----TC-A-C-TA----TT---G------GGA---A--C
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 3
s Perodicticus_ibeanus.k141_855320                           11052 26 +     13100 ACT--GA--T-T-CT-TT----TT-A-CTCT----AT---G------CAA---A--C
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             9446 26 +     25941 ACT--GA--T-T-CT-TT----TT-A-CTCT----AT---G------CAA---A--C
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18195695  8 -  18517816 -----------------------------------TG---T------GGG---A--A
i Peromyscus_maniculatus.KI615324.1                      I 6 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     29021 14 -     29689 -----GA--C----C-CTTGTCAC-C-G-----------------------------
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 I 8
s Phocoena_phocoena.PhoPho_flattened_line_24159               9623 25 +     63832 GGA--CT--C----T-TT----TC-A-C-TA----CT---G------AGG---ACAT
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 1
s Piliocolobus_badius.k141_1234363                           44668 26 +     62158 CCTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        39415 26 +     89929 CCTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40831 26 +     51399 CCTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14297070 26 -  14605196 CCTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2722 22 +     22620 AGG--AC--T----C-T-----TC-A-C-TA----TT---G-----G-GA---A--A
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 3
s Platanista_gangetica.PlaMin_flattened_line_32310           35324 25 +     35617 AGA--CT--C----T-TT----TC-A-C-TA----CT---G------AGG---ATGT
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 I 1
s Pongo_abelii.CM009266.2                                189132172 26 + 189387572 CCTGAAG--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9571779 26 +   9816681 CCTGAAG--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               74352 25 -     81375 CCTGAAA--C----T-TT----TC-A-G--A----TG---T------GGGG--A--T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              6173 25 +     19060 CCTGAAA--C----T-TT----TC-A-G--A----TG---T------GGGG--A--T
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 14302 23 -     22811 TCA--CT--C----T-CG----TC-A-C-TG----AG---T------GGG---C--A
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2597712 26 -   4620579 act--ga--t--tct-tt----tc-t-ctgt----gG---A------GGA---A--C
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     991694 26 +   2598838 ACT--GA--T-T-CT-TT----TC-T-CTAT----GG---A------GGA---A--C
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          30006 26 +     38485 ACT--GA--T-T-CT-TT----TC-T-CTAT----GG---A------GGA---A--C
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              2048 26 -     13098 ACT--GA--T-T-CT-TT----TC-T-CTGT----GG---A------GGA---A--C
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          27527 26 +     35766 ACT--GA--T-T-CT-TT----TC-T-CTGT----GG---A------GGA---A--C
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           5714 26 -     24134 ACT--GA--T-T-CT-TT----TC-T-CTGT----GG---A------GGA---A--C
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        29539 26 -     67325 ACT--GA--T-T-CT-TT----TC-T-CTAT----GG---A------GGA---A--C
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           5762 26 -      6182 ACT--GA--T-T-CT-TT----TC-T-CTAT----GG---A------GGA---A--C
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            11319  8 -     21651 -----------------------------------TG---T------GAG---A--A
i Psammomys_obesus.NESX01036370.1                        I 6 C 0
s Pteronotus_parnellii.KE909381.1                            16122 13 -     21811 -----------------------C-A-C-TG----CT---G------GGA---C--G
i Pteronotus_parnellii.KE909381.1                        I 6 I 3
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41479 22 +     42204 gac--t---c----t-tt----tc-t-c-tc----tt---g------gga---a--c
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 3
s Pteropus_alecto.KB030862.1                              22977732 23 +  28871421 AAA--CT--C----T-TT----TC-A-C-TA----CT---G------GGA---A--c
i Pteropus_alecto.KB030862.1                             C 0 I 3
s Pteropus_vampyrus.KN534172.1                                7785 23 -      8028 AAA--CT--C----T-TT----TC-A-C-TA----CT---G------GGA---A--c
i Pteropus_vampyrus.KN534172.1                           C 0 I 3
s Puma_concolor.QAVW01001104.1                            20275273 21 -  38429054 GAC--T---C----T--T----TC-A-C-AA----TG---G------GGA---A--C
i Puma_concolor.QAVW01001104.1                           C 0 I 3
s Pygathrix_cinerea.k141_1153803                             16159 25 -     91421 CCTGAAA--C----T-TT----TC-A-G--A----TG---T------GGGG--A--T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7610279 25 +   7812017 CCTGAAA--C----T-TT----TC-A-G--A----TG---T------GGGG--A--T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             16158 25 -     72585 CCTGAAA--C----T-TT----TC-A-G--A----TG---T------GGGG--A--T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6226 19 +     55207 --------------T-TT----TC-A-T-TA----CT---G------GGG---ATGC
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 4 I 1
s Rattus_norvegicus.chr16                                 53571535  8 +  90668790 -----------------------------------GG---C------AGG---A--A
i Rattus_norvegicus.chr16                                I 6 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        367948 23 -   3329780 gga--ct--c----t-tt----tc-a-c-ta----tt---c------ggg---a--c
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 3
s Rhinopithecus_bieti.k119_217274                             7869 25 -     11128 CCTGAAA--C----T-TT----TC-A-G--A----TG---T------GGGG--A--T
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91237218 25 - 195417433 CCTGAAA--C----T-TT----TC-A-G--A----TG---T------GGGG--A--T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672874 25 +   7961872 CCTGAAA--C----T-TT----TC-A-G--A----TG---T------GGGG--A--T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88774 23 -     96226 AAA--CT--C----T-TT----TC-A-C-TA----CT---G------GGA---A--c
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 3
s Saguinus_bicolor.k141_8081                                  2276 13 +     42994 CCTGAAG--C----T-TT----TC---------------------------------
i Saguinus_bicolor.k141_8081                             C 0 I 9
s Saguinus_imperator.k141_1496743                              971 26 +      2253 CCTGAAG--C----T-TT----TC-A-G-TA----TG---T------GAGG--A--C
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               1400 26 -      8737 CCTGAAG--C----T-TT----TC-A-G-TA----TG---T------GAGG--A--C
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                              1053 26 +      2343 CCTGAAG--C----T-TT----TC-A-G-TA----TG---T------GAGG--A--C
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209475930 26 + 209938924 CCTGAAG--C----T-TT----TC-A-G-TA----TG---T------GAGG--A--C
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                 376 26 -      7576 CCTGAAG--C----T-TT----TC-A-G-TA----TG---T------GAGG--A--C
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119951999 26 - 121099817 CCTGAGG--C----T-TT----TC-A-G-TA----TG---T------GAGG--A--C
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24341 26 +     46362 CCTGAGG--C----T-TT----TC-A-G-TA----TG---T------GAGG--A--C
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               24436 26 +     45824 CCTGAGG--C----T-TT----TC-A-G-TA----TG---T------GAGG--A--C
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             41115 26 -     64574 CCTGAGG--C----T-TT----TC-A-G-TA----TG---T------GAGG--A--C
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4188 26 -     23631 CCTGAGG--C----T-TT----TC-A-G-TA----TG---T------GAGG--A--C
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 24332 26 -     61129 CCTGAGG--C----T-TT----TC-A-G-TA----TG---T------GAGG--A--C
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5421682 26 -   5703754 CCTGAGG--C----C-TT----TC-A-G-CG----CG---T------GAGG--A--C
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          56923 26 -     80660 CCTGAGG--C----C-TT----TC-A-G-CG----CG---T------GAGG--A--C
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154155 23 -    313613 TGA--CG--G----T-TT----TT-A-C-CA----TG---T------GGG---A--G
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                         1050 25 -     12572 CCTGAAA--C----T-TT----TC-A-G--A----TG---T------GGGG--A--T
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27900 25 +     39453 CCTGAAA--C----T-TT----TC-A-G--A----TG---T------GGGG--A--T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            8418 25 +     27826 CCTGAAA--C----T-TT----TC-A-G--A----TG---T------GGGG--A--T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             7940 25 -     19483 CCTGAAA--C----T-TT----TC-A-G--A----TG---T------GGGG--A--T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      1241 25 -     12762 CCTGAAA--C----T-TT----TC-A-G--A----TG---T------GGGG--A--T
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           1102 25 +     13763 CCTGAAA--C----T-TT----TC-A-G--A----TG---T------GGGG--A--T
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     1228  8 -     30804 -----------------------------------TG---T------GGG---A--A
i Sigmodon_hispidus.SigHis_scaffold_42075                I 6 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               4710 23 +   1910179 TAA--CT--C----T-TT----CA-A-C-TA----TG---T------GGG---A--A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13651956 23 -  18376816 TGA--AT--C----C-TT----TT-G-C-TA----CA---T------AGA---A--A
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1955057 11 -   3870691 -----GC--C----T-CT----TCAC-C-----------------------------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 8
s Spilogale_gracilis.SpiGra_flattened_line_13525             31950 23 +     97271 GAC--T---C----T-TT----TC-C-C-TC----TT---G------GGA--GA--C
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 3
s Suricata_suricatta.SurSur_flattened_line_6629              19291 22 -    196729 GGC--T---C----T-TT----TC-A-C-CA----TT---G------GGG---A--C
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 3
s Sus_scrofa.JH118708.1                                      37355 25 -     47482 AGA--CT--C----T-TT----TC-A-C-TG----TT---G------GGA---ACAT
i Sus_scrofa.JH118708.1                                  C 0 I 1
s Tadarida_brasiliensis.TadBra_scaffold_25820                11776 23 +     41958 AGG--AC--T----C-TT---GTC-A-C-AA----TT---G-------GA---A--A
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 3
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73564 23 +    116680 CAA--CT--C----T-CT----TC-A-C-TG----TG---T------GGG---A--A
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      119733 23 -    156842 cga--ct--c----t-tt----tc-a-c-ta----tt---g------gga---a--c
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 3
s Tapirus_terrestris.TapTer_scaffold_755                    388203 23 +    539355 tga--ct--c----t-tt----tc-a-c-ta----tt---g------gga---a--c
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 3
s Theropithecus_gelada.CM009954.1                        186429587 26 + 186847797 CCTGAAA--C----T-TT----TC-A-G-TA----TG---T------GGGG--A--C
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106326 14 +    114563 -----GA--C----T-CTTGTCAC-C-A-----------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 8
s Tolypeutes_matacus.TolMat_scaffold_228639                   7326  8 +      8208 ACA--CT--C----T-C----------------------------------------
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     82163 23 +    610378 AGG--AT--T----C-TT----TC-A-C-TA----TT---G------AGa---a--a
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 3
s Trachypithecus_auratus.k141_722599                         11991 25 -     20410 CCTGAAA--C----T-TT----TC-A-G--A----TG---T------GGGG--A--T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      1105 25 -     12674 CCTGAAA--C----T-TT----TC-A-G--A----TG---T------GGGG--A--T
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       12092 25 +     19930 CCTGAAA--C----T-TT----TC-A-G--A----TG---T------GGGG--A--T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       8503 25 -     19997 CCTGAAA--C----T-TT----TC-C-G--A----TG---T------GGGG--A--T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48642 25 -     60166 CCTGAAA--C----T-TT----TC-A-G--A----TG---T------GGGG--A--T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        16114 25 -     27529 CCTGAAA--C----T-TT----TC-A-G--A----TG---T------GGGG--A--T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     16058 25 -     18194 CCTGAAA--C----T-TT----TC-A-G--A----TG---T------GGGG--A--T
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9770 25 -     21137 CCTGAAA--C----T-TT----TC-A-G--A----TG---T------GGGG--A--T
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    8473 25 -     10723 CCTGAAA--C----T-TT----TC-A-G--A----TG---T------GGGG--A--T
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7645 25 +      9834 CCTGAAA--C----T-TT----TC-A-G--A----TG---T------GGGG--A--T
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        25958 25 +     32220 CCTGAAA--C----T-TT----TC-A-G--A----TG---T------GGGG--A--T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5940060 25 +   6242583 CCTGAAA--C----T-TT----TC-A-G--A----TG---T------GGGG--A--T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        9311 25 +     20839 CCTGAAA--C----T-TT----TC-A-G--A----TG---T------GGGG--A--T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                     584 19 +     27266 --------------T-CT----TC-A-C-TA----TT---G------GTA---ATGT
i Tragulus_javanicus.TraJav_scaffold_40725               I 4 I 1
s Trichechus_manatus.JH594705.1                            4294222 23 +  10818551 TAA--CT--C----C-CT----GC-A-C-TG----AG---T------GGG---C--A
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2156735 25 +   4065304 --T--GG--C----C-AC----CT-C-T-TTTGCAGG---T------GAG---A--G
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                    10181 25 -     10553 --T--AG--C----T-AC----CT-C-T-TTTGCAGG---T------GAG---A--G
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15738829 25 +  33153633 GGA--CT--C----T-TT----TC-A-C-TA----AT---G------AGG---ACGT
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 1
s Uropsilus_gracilis.UroGra_scaffold_12083                   54252 23 -     77625 TGA--TG--G----T-TT----TC-A-C-CC----TG---C------AGA---A--a
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4851397 21 -   5085361 -AC--T---C----T-TT----TC-T-C-TC----TT---G------GGA---A--C
i Ursus_maritimus.KK499267.1                             C 0 I 3
s Varecia_rubra.k141_590885                                  12371 26 +     50397 ACT--GA--T-T-CT-TT----TC-T-CTGT----GG---A------GGA---A--C
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             12430 26 +     24756 ACT--GA--T-T-CT-TT----TC-T-CTGT----GG---A------GGA---A--C
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5372725 19 -   5488506 --------------T-TT----TC-A-C-TA----CT---G------GGG-ACA--T
i Vicugna_pacos.KN270157.1                               C 0 I 1
s Vulpes_lagopus.VulLag_flattened_line_30954                 11745 22 -     43706 aat--t---c----t-tt----tt-t-c-tc----tt---g------gga---a--c
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 3
s Xerus_inauris.XerIna_scaffold_2302                          2030 11 +    224448 -----GA--C----T-TT----ACAC-C-----------------------------
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 8
s Zapus_hudsonius.ZapHud_scaffold_11398                      15826 11 +     63895 -----GA--C----A-TT---CAC-C-A-----------------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 8
s Ziphius_cavirostris.ZipCav_flattened_line_3601914            176 25 +       295 GGA--CT--C----T-TT----TC-A-C-TA----CT---G------AGG---ACGT
i Ziphius_cavirostris.ZipCav_flattened_line_3601914      C 0 I 1
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Tarsius_wallacei.k141_254427                                1877  3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080  3 +     70052 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             35221  4 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1851541  4 +   8254450 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Glis_glis.GliGli_scaffold_19807                            32063  0 +     49224 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cephalopachus_bancanus.k141_1423433                         6085  3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Carlito_syrichta.NW_007259797.1                           156587  3 -    496798 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       7812 15 +     62944 TTC-CCATTCC-TCAG-T
s Acinonyx_jubatus.LLWD01001279.1                           828289 12 -   1699592 ----TCATTCC-TCA-GT
i Acinonyx_jubatus.LLWD01001279.1                        I 3 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511574 12 -  29979442 ----TAATTCC-TCA-GT
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 3 C 0
s Ailurus_fulgens.LNAC01001112.1                             80634 11 -    347723 -----cattct-tca-gt
i Ailurus_fulgens.LNAC01001112.1                         I 2 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     75448  6 -     89534 CCT-C-A-T---------
i Allactaga_bullata.AllBul_scaffold_9566                 I 1 C 0
s Allenopithecus_nigroviridis.k141_3361533                   15738 15 -     52922 TTC-CCATTCC-TCAG-T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15658 15 -     28001 TTC-CCATTCC-TCAG-T
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          6156 15 -     18505 TTC-CCATTCC-TCAG-T
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           7008 15 -     12518 TTC-CCATTCC-TCAG-T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              8583 15 +     51355 TTC-CCATGCC-TCAG-T
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                1692 15 -     36483 TTC-CCATGCC-TCAG-T
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              12144 15 +     28687 TTC-CCATGCC-TCAG-T
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                  657 15 +     27940 TTC-CCATGCC-TCAG-T
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            1701 15 -      9457 TTC-CCATGCC-TCAG-T
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                              657 15 +     30492 TTC-CCATGCC-TCAG-T
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              4652 15 +     47717 TTC-CCATGCC-TCAG-T
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              1384 15 +      5663 TTC-CCATGCC-TCAG-T
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             15836 15 +     50774 TTC-CCATGCC-TCAG-T
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          676471 12 -   2318259 ----tcattcc-tca-gt
i Ammotragus_lervia.NIVO01071767.1                       I 1 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      186345 12 +    412891 ----tcattcc-tca-gt
i Anoura_caudifer.AnoCau_scaffold_1412                   I 3 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             98952 12 -    100397 ----TCATTCC-TCA-GT
i Antilocapra_americana.AntAmePen_scaffold_12469         I 1 C 0
s Aotus_azarae.k141_3104676                                  16825 15 -     33861 TTC-CCATTCC-TCAG-C
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            16822 15 -     34016 TTC-CCATTCC-TCAG-T
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299249 15 -   5030052 TTC-CCATTCC-TCAG-T
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             16858 15 -     34685 TTC-CCATTCC-TCAG-C
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               29983 15 -     47192 TTC-CCATTCC-TCAG-C
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13587 15 +     20879 AGT-TGGTTCC-TCA-GT
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 8 C 0
s Arctocebus_calabarensis.k141_2318572                       12269 15 +     14667 TTC-CCATTCC-TCA-GG
i Arctocebus_calabarensis.k141_2318572                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5727 12 +     43469 ----TCATTCC-TCG-CT
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 3 C 0
s Avahi_laniger.k141_765380                                  54677 15 -     92717 TGC-CCATTCT-TCA-GT
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              55308 15 +     85213 TGC-CCATTCT-TCA-GT
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15192703 12 +  23207421 ----TCGTCCC-TCA-AT
i Balaenoptera_acutorostrata.KI537508.1                  I 1 C 0
s Balaenoptera_bonaerensis.DF707048.1                         3168 12 -     18090 ----TCGTCCC-TCA-AT
i Balaenoptera_bonaerensis.DF707048.1                    I 1 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    27393 12 +     34529 ----TCGTTCC-TCA-GT
i Beatragus_hunteri.BeaHun_scaffold_50177                I 1 C 0
s Bison_bison.KN261452.1                                    200451 12 -    288883 ----tcattcc-tca-gt
i Bison_bison.KN261452.1                                 I 1 C 0
s Bos_indicus.CM003028.1                                  18363355 12 - 116941312 ----TCATTCC-TCA-GT
i Bos_indicus.CM003028.1                                 I 1 C 0
s Bos_mutus.JH880303.1                                     1126211 12 -   1948126 ----tcattcc-tca-gt
i Bos_mutus.JH880303.1                                   I 1 C 0
s Bos_taurus.CM000184.6                                   18200329 12 - 114055384 ----TCATTCC-TCA-GT
i Bos_taurus.CM000184.6                                  I 1 C 0
s Bubalus_bubalis.KI419123.1                               2819961 12 +   4408762 ----tcattcc-tca-gt
i Bubalus_bubalis.KI419123.1                             I 1 C 0
s Callibella_humilis.k141_1278103                             6709 15 -     10423 TTC-CGGTTCC-TCAG-T
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_737284                                254 15 -     31217 TTC-CCGTTCC-TCAG-T
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                              548 15 +      5377 TTC-CCGTTCC-TCAG-T
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592409 15 - 189096842 TTC-CCGTTCC-TCAG-T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1223 15 -     12329 TTC-CCGTTCC-TCAG-T
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10003219 12 -  17673402 ----TCATCCT-CCA-GC
i Camelus_bactrianus.KN276810.1                          I 1 C 0
s Camelus_dromedarius.KN272107.1                           2335695 12 -   7040546 ----TCATCCT-CCA-GC
i Camelus_dromedarius.KN272107.1                         I 1 C 0
s Camelus_ferus.KB017975.1                                  403994 12 -   1652518 ----TCATCCT-CCA-GC
i Camelus_ferus.KB017975.1                               I 1 C 0
s CanFam4.chr16                                           17800151 12 -  60362399 ----tcattcc-tca-gt
i CanFam4.chr16                                          I 3 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                      899 12 -     43241 ----tcattcc-tca-gt
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 3 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9035594 12 -   9314153 ----tcattcc-tca-gt
i Canis_lupus_dingo.QKWQ01000480.1                       I 3 C 0
s Canis_lupus_familiaris.chr16                            17960070 12 -  59632846 ----tcattcc-tca-gt
i Canis_lupus_familiaris.chr16                           I 3 C 0
s Canis_lupus_orion.HG994398.1                            18501367 12 +  63665305 ----tcattcc-tca-gt
i Canis_lupus_orion.HG994398.1                           I 3 C 0
s Capra_aegagrus.CM003241.1                               18830589 12 +  46296322 ----tcattcc-tca-gt
i Capra_aegagrus.CM003241.1                              I 1 C 0
s Capra_hircus.CM004588.1                                 18061309 12 -  44709034 ----TCATTCC-TCA-GT
i Capra_hircus.CM004588.1                                I 1 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1976 13 -     12242 GG---GGCTCC-TCA-GA
i Capromys_pilorides.CapPil_scaffold_65020               I 8 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6096 12 -     11696 ----TCATTCC-TCA-GT
i Carollia_perspicillata.CarPer_scaffold_92756           I 3 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138272 15 +    179628 ttt-tgatacc-tca-at
i Castor_canadensis.CasCan_scaffold_2074                 I 8 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     94522 12 +    217609 ----TTATCCC-TCA-GT
i Catagonus_wagneri.CatWag_scaffold_2839                 I 1 C 0
s Cebuella_niveiventris.k141_1251222                         11149 15 -     11392 TTC-CGGTTCC-TCAG-T
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               7333 15 -      7577 TTC-CGGTTCC-TCAG-T
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25653754 14 +  26074798 TTC-CCATTCC-T-AG-T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                1692 14 +     28840 TTC-CCATTCC-T-AG-T
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 1421 14 +     14051 TTC-CCATTCC-T-AG-T
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Ceratotherium_simum.JH767749.1                          12232453 12 +  27778364 ----TCATTCC-TCA-GT
i Ceratotherium_simum.JH767749.1                         I 3 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3480 12 -     25243 ----TCATTCC-TCA-GT
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 3 C 0
s Cercocebus_atys.KQ010504.1                               4476675 15 +   4669795 TTC-CCATTCC-TCAG-T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        1177 15 +     17872 TTC-CCATTCC-TCAG-T
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9867 15 +     27781 TTC-CCACTCC-TCAG-T
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        10035 15 -     20310 TTC-CCATTCC-TCAG-T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          13015 15 +     29689 TTC-CCATTCC-TCAG-T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7761 15 -     20078 TTC-CCATTCC-TCAG-T
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          15683 15 -     27936 TTC-CCATTCC-TCAG-T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            4549 15 -     17152 TTC-CCATTCC-TCAG-T
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38818094 15 +  39242232 TTC-CCATTCC-TCAG-T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223783 15 -  21565898 TTC-CCATTCC-TCAG-T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40902 15 -     53127 TTC-CCATTCC-TCAG-T
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        1153 15 +     13442 TTC-CCATTCC-TCAG-T
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15702 15 -     27947 TTC-CCATTCC-TCAG-T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         15678 15 +     17596 TTC-CCATTCC-TCAG-T
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          1721 15 +     14005 TTC-CCATTCC-TCAG-T
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1444 15 -      8501 -ATCTCATTCC-CCA-GT
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             22056 15 -     52598 TGC-CCATTCC-TCA-GT
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           17427 15 +     57038 TGC-CCATTCC-TCA-GT
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1253851 14 +   2543920 GG---GGTTCCTTCA-CA
i Chinchilla_lanigera.JH722012.1                         I 8 C 0
s Chiropotes_albinasus.k141_2206961                           2033 15 -     15524 TTC-CCGTCCC-GCAG-T
i Chiropotes_albinasus.k141_2206961                      I 9 C 0
s Chlorocebus_aethiops.ctg25                              18429660 15 -  18827391 TTC-CCATTCC-TCAG-T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       16096 15 -     50209 TTC-CCATTCC-TCAG-T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135423097 15 + 135778131 TTC-CCATTCC-TCAG-T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 19280 16 +     19366 CTTCTCATTCC-TTG-GT
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            174354 16 +    839153 CTTTTCATTCC-TCA-GT
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1911575 15 +   2368649 TTC-CCATTCC-TCAG-T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949827 15 + 200372422 TTC-CCATTCC-TCAG-T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              38109 15 +     84244 TTC-CCATTCC-TCAG-T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549025 13 -  53390261 CTT---ACTCC-TCA-GT
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1458 12 +     23735 ----TCATTCC-TCA-GT
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      I 3 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 50995 14 +     63868 CTT-C-ATTTC-TTC-AT
i Cricetomys_gambianus.CriGam_scaffold_18520             I 8 C 0
s Cricetulus_griseus.LT883664.1                           11668483 14 + 224834208 TGT-C-ATTCC-TCC-TT
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               3925 11 -     19598 C-----ACTCC-GCA-AT
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29472 12 -     87169 ----TCATTCA-TCA-GT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 3 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    838040 15 +   1526836 GGT-CATTTCC-TCA-GT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  36843  9 +     51376 GG-------CT-TCA-GG
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 8 C 0
s Dasypus_novemcinctus.JH564415.1                            64461 15 +   2246927 -TTCTCATTCC-TCA-AT
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12538253 15 -  12879189 CGC-CCATTCT-TCA-GG
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16812341 12 +  35494412 ----tcatccc-tca-at
i Delphinapterus_leucas.KZ290073.1                       I 1 C 0
s Desmodus_rotundus.KZ672289.1                             8631093 12 +  20541912 ----TCATTCC-TCA-GT
i Desmodus_rotundus.KZ672289.1                           I 3 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  674301 12 +   1390856 ----tcattcc-tca-gt
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 3 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    7053 12 +    198055 ----TCATTCC-TCG-GT
i Diceros_bicornis.DicBicMic_scaffold_5955               I 3 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37327 13 +     67921 GG---GGTTCC-TCA-GA
i Dinomys_branickii.DinBra_scaffold_21862                I 8 C 0
s Echinops_telfairi.JH980293.1                            48781743 16 + 111700974 CTTCTCATTCT-TAA-AT
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.KE759718.1                                  11524 12 +     11740 ----tccttcc-tca-gt
i Eidolon_helvum.KE759718.1                              I 3 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       311626 12 +    607251 ----TCATTCC-TCA-GT
i Elaphurus_davidianus.JRFZ01104969.1                    I 1 C 0
s Elephantulus_edwardii.JH947257.1                         1098708 16 +  10337057 CTTCTCACTCT-TGA-AC
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          21453 14 -    110024 CTT-T-ATTTC-TCC-AT
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                            1359 14 +      8657 CTT-T-ATTTC-TCC-AT
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16330586 12 -  41312741 ----TCACTCC-TCA-GT
i Enhydra_lutris.KZ291758.1                              I 3 C 0
s Eptesicus_fuscus.JH977646.1                              2146710 12 -  14770903 ----TCATTCC-TCA-GT
i Eptesicus_fuscus.JH977646.1                            I 3 C 0
s Equus_asinus.JREZ01000139.1                              1284558 12 +   4378816 ----tcattcc-tca-gg
i Equus_asinus.JREZ01000139.1                            I 3 C 0
s Equus_caballus.CM000403.2                               18532378 12 -  39960074 ----TCATTCC-TCA-GG
i Equus_caballus.CM000403.2                              I 3 C 0
s Equus_przewalskii.KK951119.1                               34407 12 +    498745 ----TCATTCC-TCA-GG
i Equus_przewalskii.KK951119.1                           I 3 C 0
s Erinaceus_europaeus.JH835339.1                           3329245 13 -   7059049 CGT---ATTTC-TTA-AT
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21206265 15 -  21539334 TTC-CTATTCC-TCAG-T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12015 12 +    133382 ----tcatccc-tca-at
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 1 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             25952 12 -     44125 ----TCGTCCC-TCG-AT
i Eubalaena_japonica.EubJap_flattened_line_31514         I 1 C 0
s Eulemur_albifrons.k141_576796                              41105 15 -     44621 TGC-CCATTCC-TCA-GT
i Eulemur_albifrons.k141_576796                          C 0 C 0
s Eulemur_collaris.k141_377015                                7486 15 -     16928 TGC-CCATTCC-TCA-GT
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              16518 15 -     25546 TGC-CCATTCC-TCA-GT
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            13714 15 +     26330 TGC-CCATTCC-TCA-GT
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14949 15 +     23973 TGC-CCATTCC-TCA-GT
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                13711 15 +     75513 TGC-CCATTCC-TCA-GT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 11641 15 +     97555 TGC-CCATTCC-TCA-GT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                             1133 15 +     13026 TGC-CCATTCC-TGA-GT
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  5185 15 -     17153 TGC-CCATTCC-TCA-GT
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              14758 15 +    111500 TGC-CCATTCC-TCA-GT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237931 12 + 206538554 ----TCATTCC-TCA-GT
i Felis_catus.CM001381.2                                 I 3 C 0
s Felis_catus_fca126.CM031415.1                           20196774 12 + 205367284 ----TCATTCC-TCA-GT
i Felis_catus_fca126.CM031415.1                          I 3 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 10528 12 -     36744 ----TCATTCC-TCA-GT
i Felis_nigripes.FelNig_flattened_line_20823             I 3 C 0
s Fukomys_damarensis.KN121974.1                             851382 13 +   3816255 AT---GGTTCC-TCA-GT
i Fukomys_damarensis.KN121974.1                          I 8 C 0
s Galago_moholi.ctg2040                                     427572 15 -    453645 TTC-CCATTCC-TCA-GG
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             5262 15 +     11339 TTC-CCATTCC-TCA-GG
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            2560 15 +     41679 TTC-CCAATCT-TCA-GG
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               2164 15 -      9135 CTT-Tcattct-tca-gt
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     609590 12 -    660261 ----TCATTCC-TCA-GT
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 1 C 0
s Gorilla_beringei.k141_3596273                              17067 15 -     32273 TTC-CCATTCC-TCAG-T
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186339202 15 + 186649187 TTC-CCATTCC-TCAG-T
i Gorilla_gorilla.LT578341.1                             I 25 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33585 15 +     78134 TTT-CTGTTTC-TCA-GT
i Graphiurus_murinus.GraMur_scaffold_10447               I 8 C 0
s Hapalemur_alaotrensis.k141_170648                           7813 15 -     19426 TGC-CCATTCC-TCA-GT
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12966 15 -     15286 TGC-CCATTCC-TCA-GT
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             14605 15 +     18253 TGC-CCATTCC-TCA-GT
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         14706 15 -     41752 TGC-CCATTCC-TCA-CT
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         14543 15 -     16460 TGC-CCATTCC-TCA-GT
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243311 12 +    327341 ----TCATTCC-TCA-GT
i Helogale_parvula.HelPar_flattened_line_2585            I 3 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18794 12 +     36099 ----TCATCCC-TCA-GT
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 1 C 0
s Heterocephalus_glaber.JH602082.1                        20663136 13 +  22651954 CT---GATTCC-TCA-GT
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1870 16 +      7595 CTTCTCATTCT-GCA-AT
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 I 8
s Hipposideros_armiger.JXIK01000431.1                       111487 12 +   1711038 ----TCAT-TCTTCA-GT
i Hipposideros_armiger.JXIK01000431.1                    I 3 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               42917 13 +     43066 ----TCATTTCTTCA-GT
i Hipposideros_galeritus.HipGal_scaffold_29171           I 3 C 0
s Hoolock_leuconedys.ctg274                                    435868 15 +    630532 TTC-CCATTCC-TCAG-T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46014 12 +     55795 ----CCATTCC-TCA-GT
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 3 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84032 13 +    135385 CT---GGTTCC-TCA-GT
i Hystrix_cristata.HysCri_scaffold_5660                  I 8 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7521929 15 -   7955117 AGT-TGGTTCC-TCA-GT
i Ictidomys_tridecemlineatus.JH393364.1                  I 8 C 0
s Indri_indri.k141_3655594                                   23500 15 +     31101 TGC-CAATTCC-TCA-GT
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               23556 12 +     23964 ----TCATCCC-TCA-AT
i Inia_geoffrensis.IniGeo_flattened_line_48101           I 1 C 0
s Jaculus_jaculus.JH725527.1                               8278109  7 -   9596543 CCT-C-ACT---------
i Jaculus_jaculus.JH725527.1                             I 1 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                2913 12 -      3359 ----TCATCCC-TCA-AT
i Kogia_breviceps.KogBre_flattened_line_192630           I 1 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    17368 12 -     42476 ----TCCTTCC-TCA-GT
i Lasiurus_borealis.LasBor_scaffold_32767                I 25 C 0
s Lemur_catta.scaffold_24                                 15525058 15 -  30322482 TGC-CCATTCC-TCA-GT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        8988 15 +     64341 TTC-CCGTTCC-TCCG-T
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           1328 15 -     35062 TTC-CCGTTCC-TCAG-T
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        9015 15 +     35603 TTC-CCGTTCC-TCAG-T
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    30628 15 +     38576 TTC-CCGTTCC-TCAG-T
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         27332 15 +     66356 TTC-CCGTTCC-TCAG-T
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         11948 15 -     23766 TGC-CCATTCC-TCA-GT
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             30002 15 +     45836 TGC-CCATTCC-TCA-GT
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          2547 15 +     25010 TGC-CCATTCC-TCA-GT
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27942 15 +     54090 TGC-CCATTCC-TCA-GT
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3044047 12 +   3914936 ----tcattcc-tca-gt
i Leptonychotes_weddellii.KB714746.1                     I 3 C 0
s Lepus_americanus.LepAme_scaffold_107385                     7740 15 -     14121 CTT-TCATTCC-TCA-TC
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             268607 12 -    662738 ----tcatccc-tca-at
i Lipotes_vexillifer.KE559953.1                          I 1 C 0
s Lophocebus_aterrimus.ctg367                              1438218 15 +   1826925 TTG-CCATTCC-TCAG-T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_399337                            15938 15 -     33856 TTC-CCATTCC-TCA-GG
i Loris_lydekkerianus.k141_399337                        C 0 C 0
s Loris_tardigradus.ctg83                                  1013649 15 +   6120653 TTC-CCATTCC-TCA-GG
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4218340 16 -  43346337 CTTCTTAttct-tca-at
i Loxodonta_africana.GL010049.1                          C 0 I 66
s Lycaon_pictus.CM007581.1                                17956310 12 -  59628241 ----tcattcc-tca-gt
i Lycaon_pictus.CM007581.1                               I 3 C 0
s Macaca_arctoides.k141_2326796                               8033 15 +     40492 TTC-CCATTCC-TCAG-T
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59677292 15 +  60120075 TTC-CCATTCC-TCAG-T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13808 15 -     26193 TTC-CCATTCC-TCAG-T
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            81592 15 -    114318 TTC-CCATTCC-TCAG-T
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  7279 15 -     23192 TTC-CCATTCC-TCAG-T
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16752 15 -     29190 TTC-CCATTCC-TCAG-T
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  25317 15 +     37952 TTC-CCATTCC-TCAG-T
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186840406 15 + 187317192 TTC-CCATTCC-TCAG-T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458969 15 -  25927173 TTC-CCATTCC-TCAG-T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  81165 15 +     89720 TTC-CCATTCC-TCAG-T
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 8166 15 +     20474 TTC-CCATTCC-TCAG-T
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   7966 15 -     14993 TTC-CCATTCC-TCAG-T
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  330832 15 -    668171 TTC-CCATTCC-TCAG-T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 6279 15 -     24072 TTC-CCATTCC-TCAG-T
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26904 15 -     45290 TTC-CCATTCC-TCAG-T
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91617 12 +     94391 ----tcagttc-tca-gt
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 3 C 0
s Mandrillus_leucophaeus.scaffold280                      23938495 15 -  24302211 TTC-CCATTCC-TCAG-T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352617 15 +    752769 TTC-CCATTCC-TCAG-T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              19237 12 +    737560 ----TCATTCC-TTG-GT
i Manis_javanica.JSZB01003497.1                          I 3 C 0
s Manis_pentadactyla.KN006162.1                              51223 12 -    317179 ----TCATTCC-TTG-GT
i Manis_pentadactyla.KN006162.1                          I 3 C 0
s Marmota_marmota.CZRN01000018.1                          33104228 15 -  40650429 AGT-TGGTTCC-TCA-GT
i Marmota_marmota.CZRN01000018.1                         I 8 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        14333 12 -    207569 ----TCAGTCT-TCA-GA
i Megaderma_lyra.MegLyr_scaffold_4542                    I 3 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             11297 12 +     13704 ----TCATTCC-TCA-GT
i Mellivora_capensis.MelCap_flattened_line_69365         I 3 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 33681 14 +    140813 CTT-A-ATTCC-TCC-AG
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12183145 14 -  29670104 cag-c-attcc-tcc-at
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    4224 12 +     10310 ----TCATCCC-TCA-AT
i Mesoplodon_bidens.MesBid_scaffold_108144               I 1 C 0
s Mico_argentatus.k141_1239457                                7145 15 -      7380 TTC-CGGTTCC-TCAG-T
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_schneideri.k141_1950671                                      7118 15 -      7356 TTC-CGGTTCC-TCAG-T
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18292501 15 -  93316391 TGC-CCATTCC-TCA-GT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    24460 16 -    145209 CTTCTCATTCT-GAA-AT
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                16633 12 -     19307 ----TCATTCC-TCA-GT
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 3 C 0
s Microtus_ochrogaster.CM001695.1                         11261438 14 -  27267610 CTT-T-ACTTC-TCC-AT
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miopithecus_ogouensis.k141_534055                          10199 15 -     28506 TTC-CCATTCC-TCAG-T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6914 12 -      8324 ----TCATTCC-TCA-GT
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 3 C 0
s Mirza_zaza.k141_952172                                     10044 15 -     37649 TGC-CCATTCC-TTA-GT
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    27730 12 -    437263 ----tcatccc-tca-at
i Monodon_monoceros.MonMon_M_scaffold_103                I 1 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142635 12 -    366855 ----TCATTCC-TCA-GT
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 3 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   1671 12 +     82753 ----tcatttc-tca-gt
i Moschus_moschiferus.MosMos_scaffold_13123              I 1 C 0
s Murina_feae.MurFea_scaffold_85699                           7813 12 +     14753 ----TCATTCC-TCA-GT
i Murina_feae.MurFea_scaffold_85699                      I 3 C 0
s Mus_caroli.LT608237.1                                   84362297 14 - 120012414 CTT-C-ATTTC-TCC-AT
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87651290 14 - 129401213 CTT-C-ATTTC-TCC-AT
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31355944 14 -  89631738 CTT-C-ATTTC-TCC-AT
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90753353 14 - 130317789 CTT-C-ATTTC-TCC-AT
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               302695 12 -  14710649 ----TCATTCC-TCA-GT
i Mustela_putorius.JH418006.1                            I 3 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     72158 13 -     80779 GG---GGCTCC-TCA-GA
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 8 C 0
s Myotis_brandtii.KE162005.1                                281455 12 -  10118263 ----TCATTCC-TCA-GT
i Myotis_brandtii.KE162005.1                             I 3 C 0
s Myotis_davidii.KB100139.1                                1588710 12 -   6019432 ----TTATTCC-TCA-GT
i Myotis_davidii.KB100139.1                              I 3 C 0
s Myotis_lucifugus.GL429869.1                              3904807 12 -   4330536 ----TCATTCC-TCA-GT
i Myotis_lucifugus.GL429869.1                            I 3 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                         958 12 +      1835 ----TCATTCC-TCA-GT
i Myotis_myotis.MyoMyo_scaffold_281845                   I 3 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190222 16 +    196477 CTTCTCATGCC-TCG-GT
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2035507 14 -   3037898 CTT-C-ATTCC-ACT-AT
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               16202 15 +     21681 TTC-CCATTCC-TCAG-T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308507 12 +  31847680 ----tcattcc-tca-gt
i Neomonachus_schauinslandi.NINY01007730.1               I 3 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5866687 12 +   7148211 ----tcatccc-tca-at
i Neophocaena_asiaeorientalis.KZ687982.1                 I 1 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    758852 12 +    783361 ----TCATTTC-TCA-GA
i Noctilio_leporinus.NocLep_scaffold_251                 I 3 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150372 12 -   9404916 ----tcattcc-tca-gt
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 3 C 0
s Nycticebus_bengalensis.LG01                            102587178 15 - 196305487 TTC-CAATTCC-TCA-GG
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1127096                             1102 15 +      2075 TTC-CAATTCC-TCA-GG
i Nycticebus_coucang.k141_1127096                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105762533 15 + 199412804 TTC-CAATTCC-TCA-GG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1365166 15 +   3988456 CTT-TCATTTC-TTA-TC
i Ochotona_princeps.JH802162.1                           I 47 C 0
s Odobenus_rosmarus.KB229312.1                              507652 12 -   2017862 ----tcattcc-tca-gt
i Odobenus_rosmarus.KB229312.1                           I 3 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          77503 12 -    150152 ----TCATTCC-TCA-GT
i Okapia_johnstoni.LVCL01S0005463.1                      I 1 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   26087 14 +     28053 CTT-T-ATTTC-TCC-AT
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    81124 14 +    102263 CTT-C-ATTCC-CCC-AT
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2782610 12 -  10937097 ----TCATCCC-TCA-AT
i Orcinus_orca.KB316932.1                                I 1 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387              11107 16 -     18566 cttctcattct-tca-at
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67148641 15 + 174332312 CTT-TCATTCC-TCA-TC
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       463322 12 -    559221 ----tcattcc-tca-gt
i Otocyon_megalotis.JAEUCK010005147.1                    I 3 C 0
s Otolemur_crassicaudatus.k141_222918                         5087 15 +      8798 TTC-CCATTCC-TCA-GG
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             697249 15 -   1103335 TTC-CCATTCC-TCA-GG
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   17586769 12 +  44047080 ----tcattcc-tca-gt
i Ovis_aries.CM001607.2                                  I 1 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      174746 12 -    191736 ----tcattcc-tca-gt
i Ovis_canadensis.OviCan_scaffold_2572                   I 1 C 0
s Pan_paniscus.KQ411613.1                                    45155 15 +     80009 TTC-CCATTCC-TCAG-T
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189144053 15 + 189151597 TTC-CCATTCC-TCAG-T
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152136 12 +    230217 ----TCATTCC-TCA-GT
i Panthera_onca.PanOnc_flattened_line_3271               I 3 C 0
s Panthera_pardus.KV860321.1                                265345 12 +  18783137 ----TCATTCC-TCA-GT
i Panthera_pardus.KV860321.1                             I 3 C 0
s Panthera_tigris.KE722367.1                               4722225 12 -   8748460 ----TCATTCC-TCA-GT
i Panthera_tigris.KE722367.1                             I 3 C 0
s Pantholops_hodgsonii.KE114653.1                          1265664 12 -   2937107 ----tcattcc-tca-gt
i Pantholops_hodgsonii.KE114653.1                        I 1 C 0
s Papio_anubis.CM001495.2                                183444295 15 + 183742232 TTG-CCATTCC-TCAG-T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7941 15 +     20448 TTG-CCATTCC-TCAG-T
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20564753 15 +  20919399 TTG-CCATTCC-TCAG-T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6685 15 +     41871 TTG-CCATTCC-TCAG-T
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     9978 15 +     27711 TTG-CCATTCC-TCAG-T
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                   975 15 -     11374 TTG-CCATTCC-TCAG-T
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13631 12 -     78924 ----TCATTCC-TCA-GT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 3 C 0
s Perodicticus_ibeanus.k141_855320                           11078 15 +     13100 TTC-CGATTCC-TCA-GG
i Perodicticus_ibeanus.k141_855320                       C 0 C 0
s Perodicticus_potto.k141_1092580                             9472 15 +     25941 TTC-CCATTCC-TCA-GG
i Perodicticus_potto.k141_1092580                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18195703 14 -  18517816 CTT-C-ATTCC-TCC-AT
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     29043 13 -     29689 CG---GATTCC-TTG-GT
i Petromus_typicus.PetTyp_scaffold_42190                 I 8 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               9649 12 +     63832 ----tcatccc-tca-at
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 1 C 0
s Piliocolobus_badius.k141_1234363                           44694 15 +     62158 TTC-CCATTCC-TCAG-T
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        39441 15 +     89929 TTC-CCATTCC-TCAG-T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40857 15 +     51399 TTC-CCATTCC-TCAG-T
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14297096 15 -  14605196 TTC-CCATTCC-TCAG-T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2747 12 +     22620 ----TCATTCC-TCA-GT
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 3 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           35350 12 +     35617 ----TCATCCC-CCA-AT
i Platanista_gangetica.PlaMin_flattened_line_32310       I 1 C 0
s Pongo_abelii.CM009266.2                                189132198 15 + 189387572 TTC-CCATTCC-TCAG-T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9571805 15 +   9816681 TTC-CCATTCC-TCAG-T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               74377 15 -     81375 TTC-CCATTCC-TCAG-T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              6198 15 +     19060 TTC-CCATTCC-TCAG-T
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 14325 16 -     22811 CTTCTCATTCT-GCA-AC
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 I 8
s Prolemur_simus.MPIZ01000396.1                            2597738 15 -   4620579 TGC-CCATTCC-TCA-GT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     991720 15 +   2598838 TAC-CCATTCC-TCA-GT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          30032 15 +     38485 TAC-CCATTCC-TCA-GT
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              2074 15 -     13098 TAC-CCATTCC-TCA-GT
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          27553 15 +     35766 TAC-CCATTCC-TCA-GT
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           5740 15 -     24134 TAC-CCATTCC-TCA-GT
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        29565 15 -     67325 TAC-CCATTCC-TCA-GT
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           5788 15 -      6182 TAC-CCATTCC-TCA-GT
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            11327 14 -     21651 CTT-A-ATTCC-TCC-AG
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            16138 12 -     21811 ----TCCTTCC-ACA-GC
i Pteronotus_parnellii.KE909381.1                        I 3 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41504 12 +     42204 ----tcattcc-tca-tt
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 3 C 0
s Pteropus_alecto.KB030862.1                              22977758 12 +  28871421 ----tcattcc-tca-gt
i Pteropus_alecto.KB030862.1                             I 3 C 0
s Pteropus_vampyrus.KN534172.1                                7811 12 -      8028 ----tcattcc-tca-gt
i Pteropus_vampyrus.KN534172.1                           I 3 C 0
s Puma_concolor.QAVW01001104.1                            20275297 12 -  38429054 ----TCATTCC-TCA-GT
i Puma_concolor.QAVW01001104.1                           I 3 C 0
s Pygathrix_cinerea.k141_1153803                             16184 15 -     91421 TTC-CCATTCC-TCAG-T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7610304 15 +   7812017 TTC-CCATTCC-TCAG-T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             16183 15 -     72585 TTC-CCATTCC-TCAG-T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6246 12 +     55207 ----TCATTCC-TCA-GT
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 1 C 0
s Rattus_norvegicus.chr16                                 53571543 14 +  90668790 CTT-C-ATTTC-TCC-AT
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        367974 12 -   3329780 ----tcattcc-tca-gt
i Rhinolophus_sinicus.LVEH01000134.1                     I 3 C 0
s Rhinopithecus_bieti.k119_217274                             7894 15 -     11128 TTC-CCATTCC-TCAG-T
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91237243 15 - 195417433 TTC-CCATTCC-TCAG-T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672899 15 +   7961872 TTC-CCATTCC-TCAG-T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88800 12 -     96226 ----tcattcc-tca-gt
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 3 C 0
s Saguinus_bicolor.k141_8081                                  2298 15 +     42994 TTC-CCGTCCC-GCAG-T
i Saguinus_bicolor.k141_8081                             I 9 C 0
s Saguinus_imperator.k141_1496743                              997 15 +      2253 TTC-CCGTTCC-GCAG-T
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               1426 15 -      8737 TTC-CCGTTCC-GCTG-T
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                              1079 15 +      2343 TTC-CCGTTCC-GCAG-G
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209475956 15 + 209938924 TTC-CCGTTCC-GCAG-T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                 402 15 -      7576 TTC-CCGTTCC-GCAG-T
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119952025 15 - 121099817 TTC-CCATTCC-TCAG-T
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24367 15 +     46362 TTC-CCATTCC-TCAG-T
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               24462 15 +     45824 TTC-CCATTCC-TCAG-T
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             41141 15 -     64574 TTC-CCATTCC-TCAG-T
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4214 15 -     23631 TTC-CCATTCC-TCAG-T
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 24358 15 -     61129 TTC-CCATTCC-TCAG-T
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5421708 14 -   5703754 TTC-CCATTCC-T-AG-T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          56949 14 -     80660 TTC-CCATTCC-T-AG-T
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154178 13 -    313613 CTT---ATTCC-TCA-GT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                         1075 15 -     12572 TTC-CCATTCC-TCAG-T
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27925 15 +     39453 TTC-CCATTCC-TCAG-T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            8443 15 +     27826 TTC-CCATTCC-TCAG-T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             7965 15 -     19483 TTC-CCATTCC-TCAG-T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      1266 15 -     12762 TTC-CCATTCC-TCAG-T
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           1127 15 +     13763 TTC-CCATTCC-TCAG-T
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     1236 14 -     30804 CGT-C-ATTCC-CTC-AT
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               4733 16 +   1910179 CTTCCCATTCC-TCC-GT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13651979 11 -  18376816 C-----ATTCC-TTA-AT
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1955076 15 -   3870691 AGT-TGGTTCC-TCA-GT
i Spermophilus_dauricus.KZ294078.1                       I 8 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             31976 12 +     97271 ----TCATTCT-TCA-GT
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 3 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              19316 12 -    196729 ----TCATTCC-TCA-GT
i Suricata_suricatta.SurSur_flattened_line_6629          I 3 C 0
s Sus_scrofa.JH118708.1                                      37381 12 -     47482 ----TCATCCC-GCA-GT
i Sus_scrofa.JH118708.1                                  I 1 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                11802 12 +     41958 ----TCATTCC-TCA-GG
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 3 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73587 16 +    116680 CTTCTCATTCC-TCA-GT
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      119759 12 -    156842 ----tcattcc-tca-gt
i Tapirus_indicus.TapInd_scaffold_9301                   I 3 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    388229 12 +    539355 ----tcattcc-tca-gt
i Tapirus_terrestris.TapTer_scaffold_755                 I 3 C 0
s Theropithecus_gelada.CM009954.1                        186429613 15 + 186847797 TTG-CCATTCC-TCAG-T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106348 13 +    114563 TG---AGTTCC-TCG-GT
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 8 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   7334 15 +      8208 -ATCTCATTCC-CCA-GT
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     82189 12 +    610378 ----tcattcc-tca-gt
i Tonatia_saurophila.TonSau_scaffold_294                 I 3 C 0
s Trachypithecus_auratus.k141_722599                         12016 15 -     20410 TTC-CCATTCC-TCAG-T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      1130 15 -     12674 TTC-CCATTCC-TCAG-T
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       12117 15 +     19930 TTC-CCATTCC-TCAG-T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       8528 15 -     19997 TTC-CCATTCC-TCAG-T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48667 15 -     60166 TTC-CCATTCC-TCAG-T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        16139 15 -     27529 TTC-CCATTCC-TCAG-T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     16083 15 -     18194 TTC-CCATTCC-TCAG-T
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9795 15 -     21137 TTC-CCATTCC-TCAG-T
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    8498 15 -     10723 TTC-CCATTCC-TCAG-T
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7670 15 +      9834 TTC-CCATTCC-TCAG-T
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        25983 15 +     32220 TTC-CCATTCC-TCAG-T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5940085 15 +   6242583 TTC-CCATTCC-TCAG-T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        9336 15 +     20839 TTC-CCATTCC-TCAG-T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                     604 11 +     27266 ----TTACTCC-T-A-GT
i Tragulus_javanicus.TraJav_scaffold_40725               I 1 C 0
s Trichechus_manatus.JH594705.1                            4294245 16 +  10818551 CTTCTCACTCT-TCA-AT
i Trichechus_manatus.JH594705.1                          C 0 I 1
s Tupaia_chinensis.KB320699.1                              2156760 14 +   4065304 TTC-TCATTAC-CC--CT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                    10206 14 -     10553 TTC-TCATTAC-CC--CT
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15738855 12 +  33153633 ----TCATCCC-TCA-AT
i Tursiops_truncatus.MRVK01000835.1                      I 1 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54275 13 -     77625 ctt---attcc-tca-gt
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4851421 12 -   5085361 ----TAATTCC-TCA-GT
i Ursus_maritimus.KK499267.1                             I 3 C 0
s Varecia_rubra.k141_590885                                  12397 15 +     50397 TGC-CCATTCC-TCA-GT
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             12456 15 +     24756 TGC-CCATTCC-TCA-GT
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5372745 12 -   5488506 ----TCATCCT-CCA-GC
i Vicugna_pacos.KN270157.1                               I 1 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 11770 12 -     43706 ----tcattcc-tca-gt
i Vulpes_lagopus.VulLag_flattened_line_30954             I 3 C 0
s Xerus_inauris.XerIna_scaffold_2302                          2049 15 +    224448 AGT-TGGTTCC-TCA-GT
i Xerus_inauris.XerIna_scaffold_2302                     I 8 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      15845  7 +     63895 CCT-C-ATT---------
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 8 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_3601914            202 12 +       295 ----TCATCCC-TCA-AT
i Ziphius_cavirostris.ZipCav_flattened_line_3601914      I 1 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Tarsius_wallacei.k141_254427                                1877  3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080  3 +     70052 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             35221  4 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1851541  4 +   8254450 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Glis_glis.GliGli_scaffold_19807                            32063  0 +     49224 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cercocebus_lunulatus.k141_3342297                           1812  0 -     14043 C
e Cephalopachus_bancanus.k141_1423433                         6085  3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Carlito_syrichta.NW_007259797.1                           156587  3 -    496798 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     71732  0 +     87051 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       7827 1 +     62944 G
s Acinonyx_jubatus.LLWD01001279.1                           828301 1 -   1699592 G
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511586 1 -  29979442 G
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             80645 1 -    347723 g
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   15753 1 -     52922 G
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15673 1 -     28001 G
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          6171 1 -     18505 G
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           7023 1 -     12518 G
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              8598 1 +     51355 G
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                1707 1 -     36483 G
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              12159 1 +     28687 G
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                  672 1 +     27940 G
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            1716 1 -      9457 G
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                              672 1 +     30492 G
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              4667 1 +     47717 G
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              1399 1 +      5663 G
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             15851 1 +     50774 G
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          676483 1 -   2318259 g
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      186357 1 +    412891 g
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             98964 1 -    100397 G
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aotus_azarae.k141_3104676                                  16840 1 -     33861 G
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            16837 1 -     34016 G
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299264 1 -   5030052 G
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             16873 1 -     34685 G
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               29998 1 -     47192 G
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13602 1 +     20879 G
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       12284 1 +     14667 G
i Arctocebus_calabarensis.k141_2318572                   C 0 I 1
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5739 1 +     43469 G
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  54692 1 -     92717 G
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              55323 1 +     85213 G
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15192715 1 +  23207421 G
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         3180 1 -     18090 G
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    27405 1 +     34529 G
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    200463 1 -    288883 g
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003028.1                                  18363367 1 - 116941312 G
i Bos_indicus.CM003028.1                                 C 0 I 25
s Bos_mutus.JH880303.1                                     1126223 1 -   1948126 g
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000184.6                                   18200341 1 - 114055384 G
i Bos_taurus.CM000184.6                                  C 0 I 25
s Bubalus_bubalis.KI419123.1                               2819973 1 +   4408762 g
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Callibella_humilis.k141_1278103                             6724 1 -     10423 G
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_737284                                269 1 -     31217 G
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                              563 1 +      5377 G
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592424 1 - 189096842 G
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1238 1 -     12329 G
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10003231 1 -  17673402 G
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2335707 1 -   7040546 G
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  404006 1 -   1652518 G
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17800163 1 -  60362399 g
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                      911 1 -     43241 g
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9035606 1 -   9314153 g
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17960082 1 -  59632846 g
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18501379 1 +  63665305 g
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18830601 1 +  46296322 g
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18061321 1 -  44709034 G
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1989 1 -     12242 G
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6108 1 -     11696 G
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138287 1 +    179628 g
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     94534 1 +    217609 G
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                         11164 1 -     11392 G
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               7348 1 -      7577 G
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25653768 1 +  26074798 G
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                1706 1 +     28840 G
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 1435 1 +     14051 G
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Ceratotherium_simum.JH767749.1                          12232465 1 +  27778364 G
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3492 1 -     25243 G
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4476690 1 +   4669795 G
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        1192 1 +     17872 G
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9882 1 +     27781 G
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        10050 1 -     20310 G
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          13030 1 +     29689 G
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7776 1 -     20078 G
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          15698 1 -     27936 G
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            4564 1 -     17152 G
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38818109 1 +  39242232 G
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223798 1 -  21565898 G
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40917 1 -     53127 G
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        1168 1 +     13442 G
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15717 1 -     27947 G
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         15693 1 +     17596 G
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          1736 1 +     14005 G
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1459 1 -      8501 G
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             22071 1 -     52598 G
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           17442 1 +     57038 G
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1253865 1 +   2543920 G
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2206961                           2048 1 -     15524 G
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18429675 1 -  18827391 G
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       16111 1 -     50209 G
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135423112 1 + 135778131 G
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 19296 1 +     19366 G
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            174370 1 +    839153 G
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1911590 1 +   2368649 G
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949842 1 + 200372422 G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              38124 1 +     84244 G
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549038 1 -  53390261 G
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1470 1 +     23735 G
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 51009 1 +     63868 G
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11668497 1 + 224834208 G
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               3936 1 -     19598 G
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29484 1 -     87169 G
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    838055 1 +   1526836 A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  36852 1 +     51376 G
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            64476 1 +   2246927 G
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12538268 1 -  12879189 G
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16812353 1 +  35494412 g
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8631105 1 +  20541912 G
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  674313 1 +   1390856 g
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    7065 1 +    198055 G
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37340 1 +     67921 G
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Echinops_telfairi.JH980293.1                            48781759 1 + 111700974 G
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.KE759718.1                                  11536 1 +     11740 g
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       311638 1 +    607251 G
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1098724 1 +  10337057 A
i Elephantulus_edwardii.JH947257.1                       C 0 I 7
s Ellobius_lutescens.LOEQ01008920.1                          21467 1 -    110024 G
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                            1373 1 +      8657 G
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16330598 1 -  41312741 G
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2146722 1 -  14770903 G
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1284570 1 +   4378816 g
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18532390 1 -  39960074 T
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               34419 1 +    498745 T
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3329258 1 -   7059049 T
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21206280 1 -  21539334 G
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12027 1 +    133382 g
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             25964 1 -     44125 G
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Eulemur_albifrons.k141_576796                              41120 1 -     44621 G
i Eulemur_albifrons.k141_576796                          C 0 C 0
s Eulemur_collaris.k141_377015                                7501 1 -     16928 G
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              16533 1 -     25546 G
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            13729 1 +     26330 G
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14964 1 +     23973 G
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                13726 1 +     75513 G
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 11656 1 +     97555 G
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                             1148 1 +     13026 G
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  5200 1 -     17153 G
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              14773 1 +    111500 G
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237943 1 + 206538554 G
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20196786 1 + 205367284 G
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 10540 1 -     36744 G
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             851395 1 +   3816255 G
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg2040                                     427587 1 -    453645 G
i Galago_moholi.ctg2040                                  C 0 I 1
s Galago_senegalensis.k141_631886                             5277 1 +     11339 G
i Galago_senegalensis.k141_631886                        C 0 I 1
s Galagoides_demidoff.k141_1711393                            2575 1 +     41679 G
i Galagoides_demidoff.k141_1711393                       C 0 I 1
s Galeopterus_variegatus.GalVar_scaffold_108840               2179 1 -      9135 a
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     609602 1 -    660261 G
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Gorilla_beringei.k141_3596273                              17082 1 -     32273 G
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186339217 1 + 186649187 G
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33600 1 +     78134 G
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 9
s Hapalemur_alaotrensis.k141_170648                           7828 1 -     19426 G
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12981 1 -     15286 G
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             14620 1 +     18253 G
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         14721 1 -     41752 G
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         14558 1 -     16460 G
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243323 1 +    327341 G
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18806 1 +     36099 G
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20663149 1 +  22651954 G
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       111499 1 +   1711038 G
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               42930 1 +     43066 G
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    435883 1 +    630532 G
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46026 1 +     55795 G
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84045 1 +    135385 G
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7521944 1 -   7955117 G
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   23515 1 +     31101 G
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               23568 1 +     23964 G
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                2925 1 -      3359 G
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    17380 1 -     42476 G
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lemur_catta.scaffold_24                                 15525073 1 -  30322482 G
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        9003 1 +     64341 G
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           1343 1 -     35062 G
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        9030 1 +     35603 G
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    30643 1 +     38576 G
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         27347 1 +     66356 G
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         11963 1 -     23766 G
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             30017 1 +     45836 G
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          2562 1 +     25010 G
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27957 1 +     54090 G
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3044059 1 +   3914936 g
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     7755 1 -     14121 A
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             268619 1 -    662738 g
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1438233 1 +   1826925 G
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_399337                            15953 1 -     33856 G
i Loris_lydekkerianus.k141_399337                        C 0 I 1
s Loris_tardigradus.ctg83                                  1013664 1 +   6120653 G
i Loris_tardigradus.ctg83                                C 0 I 1
s Loxodonta_africana.GL010049.1                            4218422 1 -  43346337 t
i Loxodonta_africana.GL010049.1                          I 66 I 532
s Lycaon_pictus.CM007581.1                                17956322 1 -  59628241 g
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               8048 1 +     40492 G
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59677307 1 +  60120075 G
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13823 1 -     26193 G
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            81607 1 -    114318 G
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  7294 1 -     23192 G
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16767 1 -     29190 G
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  25332 1 +     37952 G
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186840421 1 + 187317192 G
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458984 1 -  25927173 G
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  81180 1 +     89720 G
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 8181 1 +     20474 G
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   7981 1 -     14993 G
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  330847 1 -    668171 G
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 6294 1 -     24072 G
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26919 1 -     45290 G
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91629 1 +     94391 g
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23938510 1 -  24302211 G
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352632 1 +    752769 G
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              19249 1 +    737560 G
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              51235 1 -    317179 G
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33104243 1 -  40650429 G
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        14345 1 -    207569 G
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             11309 1 +     13704 G
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 33695 1 +    140813 G
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12183159 1 -  29670104 g
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    4236 1 +     10310 G
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Mico_argentatus.k141_1239457                                7160 1 -      7380 G
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_schneideri.k141_1950671                                      7133 1 -      7356 G
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18292516 1 -  93316391 G
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    24476 1 -    145209 G
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 6
s Micronycteris_hirsuta.MicHir_scaffold_52381                16645 1 -     19307 G
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11261452 1 -  27267610 G
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miopithecus_ogouensis.k141_534055                          10214 1 -     28506 G
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6926 1 -      8324 G
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                     10059 1 -     37649 G
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    27742 1 -    437263 g
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142647 1 -    366855 G
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   1683 1 +     82753 g
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           7825 1 +     14753 G
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84362311 1 - 120012414 G
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87651304 1 - 129401213 G
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31355958 1 -  89631738 G
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90753367 1 - 130317789 G
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               302707 1 -  14710649 G
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     72171 1 -     80779 G
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                281467 1 -  10118263 G
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1588722 1 -   6019432 G
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3904819 1 -   4330536 G
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                         970 1 +      1835 G
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190238 1 +    196477 A
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2035521 1 -   3037898 G
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               16217 1 +     21681 G
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308519 1 +  31847680 g
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5866699 1 +   7148211 g
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    758864 1 +    783361 G
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150384 1 -   9404916 g
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102587193 1 - 196305487 G
i Nycticebus_bengalensis.LG01                            C 0 I 1
s Nycticebus_coucang.k141_1127096                             1117 1 +      2075 G
i Nycticebus_coucang.k141_1127096                        C 0 I 1
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105762548 1 + 199412804 G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 1
s Ochotona_princeps.JH802162.1                             1365181 1 +   3988456 G
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              507664 1 -   2017862 g
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          77515 1 -    150152 G
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   26101 1 +     28053 G
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    81138 1 +    102263 G
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2782622 1 -  10937097 G
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387              11123 1 -     18566 g
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67148656 1 + 174332312 A
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       463334 1 -    559221 g
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         5102 1 +      8798 G
i Otolemur_crassicaudatus.k141_222918                    C 0 I 1
s Otolemur_garnettii.GL873799.1                             697264 1 -   1103335 G
i Otolemur_garnettii.GL873799.1                          C 0 I 1
s Ovis_aries.CM001607.2                                   17586781 1 +  44047080 g
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      174758 1 -    191736 g
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    45170 1 +     80009 G
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189144068 1 + 189151597 G
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152148 1 +    230217 G
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                265357 1 +  18783137 G
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4722237 1 -   8748460 G
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1265676 1 -   2937107 g
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183444310 1 + 183742232 G
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7956 1 +     20448 G
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20564768 1 +  20919399 G
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6700 1 +     41871 G
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     9993 1 +     27711 G
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                   990 1 -     11374 G
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13643 1 -     78924 G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           11093 1 +     13100 G
i Perodicticus_ibeanus.k141_855320                       C 0 I 1
s Perodicticus_potto.k141_1092580                             9487 1 +     25941 G
i Perodicticus_potto.k141_1092580                        C 0 I 1
s Peromyscus_maniculatus.KI615324.1                       18195717 1 -  18517816 G
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     29056 1 -     29689 G
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               9661 1 +     63832 g
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           44709 1 +     62158 G
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        39456 1 +     89929 G
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40872 1 +     51399 G
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14297111 1 -  14605196 G
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2759 1 +     22620 G
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           35362 1 +     35617 G
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189132213 1 + 189387572 G
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9571820 1 +   9816681 G
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               74392 1 -     81375 G
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              6213 1 +     19060 G
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2597753 1 -   4620579 G
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     991735 1 +   2598838 G
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          30047 1 +     38485 G
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              2089 1 -     13098 G
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          27568 1 +     35766 G
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           5755 1 -     24134 G
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        29580 1 -     67325 G
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           5803 1 -      6182 G
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            11341 1 -     21651 G
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            16150 1 -     21811 A
i Pteronotus_parnellii.KE909381.1                        C 0 I 6
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41516 1 +     42204 g
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22977770 1 +  28871421 g
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                7823 1 -      8028 g
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20275309 1 -  38429054 G
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             16199 1 -     91421 G
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7610319 1 +   7812017 G
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             16198 1 -     72585 G
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6258 1 +     55207 G
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53571557 1 +  90668790 G
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        367986 1 -   3329780 g
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             7909 1 -     11128 G
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91237258 1 - 195417433 G
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672914 1 +   7961872 G
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88812 1 -     96226 g
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_8081                                  2313 1 +     42994 G
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                             1012 1 +      2253 G
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               1441 1 -      8737 G
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                              1094 1 +      2343 G
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209475971 1 + 209938924 G
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                 417 1 -      7576 G
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119952040 1 - 121099817 G
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24382 1 +     46362 G
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               24477 1 +     45824 G
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             41156 1 -     64574 G
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4229 1 -     23631 G
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 24373 1 -     61129 G
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5421722 1 -   5703754 G
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          56963 1 -     80660 G
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154191 1 -    313613 G
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 13
s Semnopithecus_entellus.k141_1672505                         1090 1 -     12572 G
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27940 1 +     39453 G
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            8458 1 +     27826 G
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             7980 1 -     19483 G
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      1281 1 -     12762 G
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           1142 1 +     13763 G
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     1250 1 -     30804 G
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 I 5
s Solenodon_paradoxus.SolPar_flattened_line_126               4749 1 +   1910179 A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13651990 1 -  18376816 G
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1955091 1 -   3870691 G
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             31988 1 +     97271 G
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              19328 1 -    196729 G
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.JH118708.1                                      37393 1 -     47482 G
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                11814 1 +     41958 G
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73603 1 +    116680 A
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      119771 1 -    156842 g
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    388241 1 +    539355 g
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Theropithecus_gelada.CM009954.1                        186429628 1 + 186847797 G
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106361 1 +    114563 G
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   7349 1 +      8208 G
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 I 6
s Tonatia_saurophila.TonSau_scaffold_294                     82201 1 +    610378 g
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         12031 1 -     20410 G
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      1145 1 -     12674 G
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       12132 1 +     19930 G
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       8543 1 -     19997 G
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48682 1 -     60166 G
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        16154 1 -     27529 G
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     16098 1 -     18194 G
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9810 1 -     21137 G
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    8513 1 -     10723 G
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7685 1 +      9834 G
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        25998 1 +     32220 G
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5940100 1 +   6242583 G
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        9351 1 +     20839 G
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                     615 1 +     27266 G
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Trichechus_manatus.JH594675.1                           12155044 1 +  14226257 t
i Trichechus_manatus.JH594675.1                          n 1 n 1
s Tupaia_chinensis.KB320699.1                              2156774 1 +   4065304 G
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                    10220 1 -     10553 G
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15738867 1 +  33153633 G
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54288 1 -     77625 g
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4851433 1 -   5085361 G
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  12412 1 +     50397 G
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             12471 1 +     24756 G
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5372757 1 -   5488506 G
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 11782 1 -     43706 a
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          2064 1 +    224448 G
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_3601914            214 1 +       295 G
i Ziphius_cavirostris.ZipCav_flattened_line_3601914      C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Zapus_hudsonius.ZapHud_scaffold_11398                      15852 0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Tarsius_wallacei.k141_254427                                1877 3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080 3 +     70052 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Procavia_capensis.ProCapCap_scaffold_85530                 14341 8 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398 7 +     37127 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             35221 4 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1851541 4 +   8254450 I
e Jaculus_jaculus.JH725527.1                               8278116 0 -   9596543 C
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                1886 8 +      7595 I
e Glis_glis.GliGli_scaffold_19807                            32063 0 +     49224 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cercocebus_lunulatus.k141_3342297                           1812 0 -     14043 C
e Cephalopachus_bancanus.k141_1423433                         6085 3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Carlito_syrichta.NW_007259797.1                           156587 3 -    496798 I
e Allactaga_bullata.AllBul_scaffold_9566                     75454 0 -     89534 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     71732 0 +     87051 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       7828 25 +     62944 CAAGGCT-------------G-------------C--AAG----------------------------T-GCT-CG-T---G--CC-AGG
s Acinonyx_jubatus.LLWD01001279.1                           828302 25 -   1699592 CTAAATT-------------T-------------A--AGTC---------------------------C-CTT--G-T---A--CT-CGG
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     71732 24 +     87051 --AAACT-------------G-------------A-AATC----------------------------C-CAT--G-C---A--ATTTAG
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511587 25 -  29979442 CTAAGTT-------------T-------------A--ATTC---------------------------C-CAT--G-T---A--CT-TGG
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             80646 25 -    347723 ctaaatt-------------t-------------a--agt---------------------------cc-cat--g-t---a--ct-tgg
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     75454 14 -     89534 --------------------------------------TA----------------------------A-TGT--G-G---A--AT-TGG
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   15754 25 -     52922 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CA-T---G--CT-GGG
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15674 25 -     28001 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CG-T---G--CT-GGG
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          6172 25 -     18505 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CG-T---G--CT-GGG
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           7024 25 -     12518 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CG-T---G--CT-GGG
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              8599 18 +     51355 AA-GGCT-------------G-------------C--AGG----------------------------TCCCT-AG--------------
i Alouatta_belzebul.k141_3560514                         C 0 I 5
s Alouatta_caraya.k141_1701091                                1708 18 -     36483 AA-GGCT-------------G-------------C--AGG----------------------------TCCCC-AG--------------
i Alouatta_caraya.k141_1701091                           C 0 I 5
s Alouatta_discolor.k141_566626                              12160 18 +     28687 AA-GGCT-------------G-------------C--AGG----------------------------TCCCC-AG--------------
i Alouatta_discolor.k141_566626                          C 0 I 5
s Alouatta_juara.k141_1302312                                  673 18 +     27940 AA-GGCT-------------G-------------C--AGG----------------------------TCCCC-AG--------------
i Alouatta_juara.k141_1302312                            C 0 I 5
s Alouatta_macconnelli.k141_918386                            1717 18 -      9457 AA-GGCT-------------G-------------C--AGG----------------------------TCCCC-AG--------------
i Alouatta_macconnelli.k141_918386                       C 0 I 5
s Alouatta_nigerrima.k141_1929159                              673 18 +     30492 AA-GGCT-------------G-------------C--AGG----------------------------TCCCC-AG--------------
i Alouatta_nigerrima.k141_1929159                        C 0 I 5
s Alouatta_palliata.k141_2135620                              4668 18 +     47717 AA-GGCT-------------G-------------C--AGG----------------------------TCCCC-AG--------------
i Alouatta_palliata.k141_2135620                         C 0 I 5
s Alouatta_puruensis.k141_362188                              1400 18 +      5663 AA-GGCT-------------G-------------C--AGG----------------------------TCCCC-AG--------------
i Alouatta_puruensis.k141_362188                         C 0 I 5
s Alouatta_seniculus.k141_117119                             15852 18 +     50774 AA-GGCT-------------G-------------C--AGG----------------------------TCCCC-AG--------------
i Alouatta_seniculus.k141_117119                         C 0 I 5
s Ammotragus_lervia.NIVO01071767.1                          676484 25 -   2318259 tcgggtt-------------t-------------a--agt---------------------------cc-tac--g-t---g--ct-tgg
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      186358 25 +    412891 tcaagtt-------------g-------------a--aac---------------------------tc-cat--g-t---g--ct-tgg
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             98965 25 -    100397 TCGAGTT-------------T-------------A--AGTC---------------------------C-TAA--G-G---A--CT-TGG
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aotus_azarae.k141_3104676                                  16841 17 -     33861 CA-GGCT-------------G-------------C--AGG----------------------------T-CCC-AG--------------
i Aotus_azarae.k141_3104676                              C 0 I 5
s Aotus_griseimembra.k141_2240599                            16838 17 -     34016 CA-GGCT-------------G-------------C--AGG----------------------------T-CCC-AG--------------
i Aotus_griseimembra.k141_2240599                        C 0 I 5
s Aotus_nancymaae.KZ198451.1                               4299265 17 -   5030052 CA-GGCT-------------G-------------C--AGG----------------------------T-CCC-AG--------------
i Aotus_nancymaae.KZ198451.1                             C 0 I 5
s Aotus_trivirgatus.k141_2152450                             16874 17 -     34685 CA-GGCT-------------G-------------C--AGG----------------------------T-CCC-AG--------------
i Aotus_trivirgatus.k141_2152450                         C 0 I 5
s Aotus_vociferans.k141_344750                               29999 17 -     47192 CA-GGCT-------------G-------------C--AGG----------------------------T-CCC-AG--------------
i Aotus_vociferans.k141_344750                           C 0 I 5
s Aplodontia_rufa.AprRuf_scaffold_68852                      13603 25 +     20879 CTAAG-C-------------G---------G---A-AAAC----------------------------C-CAT--G-G---A--CT-TGG
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       12286  4 +     14667 -------------------------------------------------------------------------------------T-CAG
i Arctocebus_calabarensis.k141_2318572                   I 1 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5740 25 +     43469 TCAAGGT-------------T-------------A--AGC----T-----------------------C-CAT--G-T---G--CT-TGG
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  54693 25 -     92717 CTGAGCT-------------G-------------C--AGC----------------------------C-CCA-GG-T---G--TT-CAG
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              55324 25 +     85213 CTGAGCT-------------G-------------C--AGC----------------------------C-CCA-GG-T---G--TT-CAG
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15192716 25 +  23207421 TCAGGTT-------------T-------------A--AGCC---------------------------C-TAC--A-T---A--CT-TGG
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         3181 25 -     18090 TCAGGTT-------------T-------------A--AGCC---------------------------C-TAC--A-T---A--CT-TGG
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    27406 25 +     34529 TCGGGTT-------------T-------------A--AGTC---------------------------C-TGC--G-T---G--CT-TGG
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    200464 25 -    288883 tcgggtt-------------t-------------a--agt---------------------------cc-tac--a-t---a--ct-tgg
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20273668 25 +  48749331 tcgggtt-------------t-------------a--agt---------------------------cc-tac--a-t---a--ct-tgg
i Bos_indicus.CM003047.1                                 I 37 I 16
s Bos_mutus.JH880303.1                                     1126224 25 -   1948126 tcgggtt-------------t-------------a--agt---------------------------cc-tac--a-t---a--ct-tgg
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18084306 25 +  45695690 tcgggtt-------------t-------------a--agt---------------------------cc-tac--a-t---a--ct-tgg
i Bos_taurus.CM000203.6                                  I 37 I 16
s Bubalus_bubalis.KI419123.1                               2819974 25 +   4408762 tcgggtt-------------t-------------a--agt---------------------------cc-tac--a-t---a--ct-tgg
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Callibella_humilis.k141_1278103                             6725 17 -     10423 CA-GGCT-------------G-------------C--AGG----------------------------T-CCC-CA--------------
i Callibella_humilis.k141_1278103                        C 0 I 5
s Callimico_goeldii.k141_737284                                270 16 -     31217 CA-GGCT-------------G-------------C--AGG----------------------------T-CCC--A--------------
i Callimico_goeldii.k141_737284                          C 0 I 5
s Callithrix_geoffroyi.k119_69176                              564 17 +      5377 CA-GACT-------------G-------------C--AGG----------------------------T-CCC-CA--------------
i Callithrix_geoffroyi.k119_69176                        C 0 I 5
s Callithrix_jacchus.pat_scaffold_3                       23592425 17 - 189096842 CA-GGCT-------------G-------------C--AGG----------------------------T-CCC-CA--------------
i Callithrix_jacchus.pat_scaffold_3                      C 0 I 5
s Callithrix_kuhlii.k119_1168854                              1239 17 -     12329 CA-GACT-------------G-------------C--AGG----------------------------T-CCC-CA--------------
i Callithrix_kuhlii.k119_1168854                         C 0 I 5
s Camelus_bactrianus.KN276810.1                           10003232 25 -  17673402 TCGAGTT-------------C-------------G--AGTC---------------------------C-TAC--A-T---A--CT-TGG
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2335708 25 -   7040546 TCGAGTT-------------C-------------G--AGTC---------------------------C-TAC--A-T---A--CT-TGG
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  404007 25 -   1652518 TCGAGTT-------------C-------------G--AGTC---------------------------C-TAC--A-T---A--CT-TGG
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17800164 25 -  60362399 ctgagtt-------------t-------------a--aat---------------------------ct-cat--g-t---a--ct-tga
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                      912 25 -     43241 ctgagtt-------------t-------------a--aat---------------------------ct-cat--g-t---a--ct-tga
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9035607 25 -   9314153 ctgagtt-------------t-------------a--aat---------------------------ct-cat--g-t---a--ct-tga
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17960083 25 -  59632846 ctgagtt-------------t-------------a--aat---------------------------ct-cat--g-t---a--ct-tga
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18501380 25 +  63665305 ctgagtt-------------t-------------a--aat---------------------------ct-cat--g-t---a--ct-tga
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18830602 25 +  46296322 tcgggtt-------------t-------------a--agt---------------------------cc-tac--g-t---g--ct-tgg
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18061322 25 -  44709034 TCGGGTT-------------T-------------A--AGTC---------------------------C-TAC--G-T---G--CT-TGG
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    1990 24 -     12242 TG-GGCT-------------G-------------A-AATT----------------------------C-TGT--G-T---G--CA-TGG
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6109 25 -     11696 TCAAGTT-------------T-------------A--AGC----T-----------------------C-CAC--G-T---G--CT-TGG
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138288 25 +    179628 ctgagct-------------g-------------a-aatc----------------------------c-cat--a-t---a--ct-tgg
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     94535 25 +    217609 TCACGTT-------------T-------------A--AGTC---------------------------C-TCC--A-T---A--CC-CGG
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                         11165 17 -     11392 CA-GGCT-------------G-------------C--AGG----------------------------T-CCC-CA--------------
i Cebuella_niveiventris.k141_1251222                     C 0 I 5
s Cebuella_pygmaea.k141_1309012                               7349 17 -      7577 CA-GGCT-------------G-------------C--AGG----------------------------T-CCC-CA--------------
i Cebuella_pygmaea.k141_1309012                          C 0 I 5
s Cebus_albifrons.Contig27                                25653769 16 +  26074798 CA-GG-T-------------G-------------C--AGG----------------------------T-CCC-CA--------------
i Cebus_albifrons.Contig27                               C 0 I 5
s Cebus_olivaceus.k141_1764483                                1707 16 +     28840 CA-GG-T-------------G-------------C--AGG----------------------------T-CCC-CA--------------
i Cebus_olivaceus.k141_1764483                           C 0 I 5
s Cebus_unicolor.k141_1837183                                 1436 16 +     14051 CA-GG-T-------------G-------------C--AGG----------------------------T-CCC-CA--------------
i Cebus_unicolor.k141_1837183                            C 0 I 5
s Ceratotherium_simum.JH767749.1                          12232466 25 +  27778364 CCAAGCT-------------C-------------A--AGGC---------------------------C-CAT--G-T---A--CT-GGG
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3493 25 -     25243 CCAAGCT-------------C-------------A--AGGC---------------------------C-CAT--G-T---A--CT-GGG
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4476691 25 +   4669795 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CA-T---G--CT-GGG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        1193 25 +     17872 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CG-T---G--CT-GGG
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9883 25 +     27781 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CA-T---G--CT-GGG
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        10051 25 -     20310 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CA-T---G--CT-GGG
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          13031 25 +     29689 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CA-T---G--CT-GGG
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7777 25 -     20078 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CA-T---G--CT-GGG
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          15699 25 -     27936 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CA-T---G--CT-GGG
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            4565 25 -     17152 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CA-T---G--CT-GGG
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38818110 25 +  39242232 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CA-T---G--CT-GGG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223799 25 -  21565898 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CA-T---G--CT-GGG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40918 25 -     53127 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CA-T---G--CT-GGG
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        1169 25 +     13442 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CA-T---G--CT-GGG
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15718 25 -     27947 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CA-T---G--CT-GGG
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         15694 25 +     17596 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CA-T---G--CT-GGG
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          1737 25 +     14005 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CA-T---G--CT-GGG
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1460 25 -      8501 CTGAGTT-------------T-------------G--AGTC---------------------------C-CAT--G-G---A--CA-CGG
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             22072 24 -     52598 CTGAGCT-------------G-------------C--AGC----------------------------C-C-A-GG-T---G--CT-TAG
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           17443 24 +     57038 CTGAGCT-------------G-------------C--AGC----------------------------C-C-A-AG-T---G--CT-TAG
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1253866 25 +   2543920 TAGGGAT-------------G-------------A-AACT----------------------------C-TGT--G-T---A--CA-TGG
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2206961                           2049 16 -     15524 CA-GGCT-------------G-------------C--AGG----------------------------T-CCC-C---------------
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18429676 25 -  18827391 CCAGGCT-------------G-------------C--AGG----------------------------T-GCC-CA-T---G--CT-GGG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       16112 25 -     50209 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CA-T---G--CT-GGG
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135423113 25 + 135778131 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CA-T---G--CT-GGG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 19297 25 +     19366 CTGAGTT-------------T-------------A--AATC---------------------------C-CAT--A-T---A--CT-TAG
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            174371 25 +    839153 CTGAGTT-------------T-------------A--AATC---------------------------C-CAT--A-T---A--CT-TAG
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1911591 25 +   2368649 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CG-T---A--CT-GGG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949843 25 + 200372422 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CA-T---A--CT-GGG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              38125 25 +     84244 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CG-T---A--CT-GGG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549039 25 -  53390261 CCAAGTT-------------G-------------A--AGT----T-----------------------C-CAC--A-T---T--CT-TGA
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1471 25 +     23735 TCAAGTT-------------T-------------A--ACT---A------------------------C-CAT--G-T---A--CT-TAA
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 51010 25 +     63868 CTGAGTT-------------G-------------A-AATC----------------------------C-CAG--G-C---A--AT-TGG
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11668498 25 + 224834208 CTGAGCC-------------A-------------A-AGTT----------------------------C-CAT--G-A---A--AT-TGG
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               3937 17 -     19598 CCAAGTT-------------T-------------A--AGTC---------------------------C-CTT-----------------
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29485 25 -     87169 CTGAATT-------------T-------------A--AGTC---------------------------C-CAT--G-T---A--CT-TGG
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    838056 26 +   1526836 ACAGGCT-------------C-------------ACACCT----------------------------G-CAT--G-T---A--CC-TGT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  36853 27 +     51376 CA-GGCT-------------G-------------A-AGCT----------------------------C-TGT--G-TCTAG--CC-TAG
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            64477 25 +   2246927 CTGGGTT-------------T-------------A--AGG-----G----------------------C-CAT--G-G---C--CT-TAG
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12538269 25 -  12879189 CTGAGCT-------------G-------------C--AGC----------------------------C-TTA-GG-T---G--CT-CAG
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16812354 25 +  35494412 tcaggtt-------------t-------------a--agc---------------------------cc-tac--a-t---a--ct-tgg
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8631106 25 +  20541912 TCAAGTT-------------T-------------A--AGC----T-----------------------C-CAT--G-T---G--CT-TGG
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  674314 25 +   1390856 ctaagct-------------c-------------a--aGGC---------------------------C-CAA--G-T---A--CT-GGG
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    7066 25 +    198055 CCAAGCT-------------C-------------A--AGGC---------------------------C-CAT--G-T---A--CT-GGG
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37341 25 +     67921 TGTGGCT-------------G-------------A-AACT----------------------------C-TGT--G-T---A--CA-CGG
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Echinops_telfairi.JH980293.1                            48781760 25 + 111700974 TGACGCT-------------G-------------A--AGTC---------------------------C-CGG--G-T---T--CT-TAA
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.KE759718.1                                  11537 25 +     11740 tcaagtg-------------t-------------a--aat---------------------------cc-cac--g-g---a--ct-tgg
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       311639 25 +    607251 TCGGGTT-------------T-------------A--AGTC---------------------------C-TAC--A-T---A--CT-TGG
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1098732  5 +  10337057 ------------------------------------------------------------------------------------CT-TGG
i Elephantulus_edwardii.JH947257.1                       I 7 C 0
s Ellobius_lutescens.LOEQ01008920.1                          21468 25 -    110024 TGGAGCT-------------G-------------A-AATC----------------------------C-CAT--G-A---A--AT-TGG
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                            1374 25 +      8657 TGGAGCT-------------G-------------A-AATC----------------------------C-CAT--G-A---A--AT-TGG
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16330599 25 -  41312741 CTGAGTT-------------T-------------A--AGTC---------------------------C-CAT--G-T---A--CT-TGG
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2146723 17 -  14770903 TCAAGTT-------------T-------------A--AGC---A------------------------C-CAG-----------------
i Eptesicus_fuscus.JH977646.1                            C 0 I 8
s Equus_asinus.JREZ01000139.1                              1284571 30 +   4378816 ctgactt-------------taaatcccaTGTTTA--AGTC---------------------------C-CAG-----------------
i Equus_asinus.JREZ01000139.1                            C 0 I 6
s Equus_caballus.CM000403.2                               18532391 17 -  39960074 CTGACTT-------------T-------------A--AGTC---------------------------C-CAG-----------------
i Equus_caballus.CM000403.2                              C 0 I 6
s Equus_przewalskii.KK951119.1                               34420 17 +    498745 CTGACTT-------------T-------------A--AGTC---------------------------C-CAG-----------------
i Equus_przewalskii.KK951119.1                           C 0 I 6
s Erinaceus_europaeus.JH835339.1                           3329259  6 -   7059049 TTCAGT------------------------------------------------------------------------------------
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21206281 25 -  21539334 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CG-T---G--CT-GGG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12028 25 +    133382 tcaggtt-------------t-------------a--agc---------------------------cc-tac--a-t---a--ct-tgg
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             25965 25 -     44125 TCAGGTT-------------T-------------A--AGCC---------------------------C-TAC--A-T---A--CT-TGG
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Eulemur_albifrons.k141_576796                              41121 25 -     44621 CTGAGCT-------------G-------------C--AGC----------------------------C-CCA-GG-T---G--CT-CAG
i Eulemur_albifrons.k141_576796                          C 0 C 0
s Eulemur_collaris.k141_377015                                7502 25 -     16928 CTGAGCT-------------G-------------C--AGC----------------------------C-CCA-GG-T---G--CT-CAG
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              16534 25 -     25546 CTGAGCT-------------G-------------C--AGC----------------------------C-CCA-GG-T---G--CT-CAG
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            13730 25 +     26330 CTGAGCT-------------G-------------C--AGC----------------------------C-CCA-GG-T---G--CT-CAG
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14965 25 +     23973 CTGAGCT-------------G-------------C--AGC----------------------------C-CCA-GG-T---G--CT-CAG
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                13727 25 +     75513 CTGAGCT-------------G-------------C--AGC----------------------------C-CCA-GG-T---G--CT-CAG
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 11657 25 +     97555 CTGAGCT-------------G-------------C--AGC----------------------------C-CCA-GG-T---G--CT-CAG
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                             1149 25 +     13026 CTGAGCT-------------G-------------C--AGC----------------------------C-CCA-GG-T---G--CT-CAG
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  5201 25 -     17153 CTGAGCT-------------G-------------C--AGC----------------------------C-CCA-GG-T---G--CT-CAG
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              14774 25 +    111500 CTGAGCT-------------G-------------C--AGC----------------------------C-CCA-GG-T---G--CT-CAG
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237944 25 + 206538554 CTAAATT-------------T-------------A--AGTC---------------------------C-CTT--G-T---A--CT-CGG
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20196787 25 + 205367284 CTAAATT-------------T-------------A--AGTC---------------------------C-CTT--G-T---A--CT-CGG
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 10541 25 -     36744 CTAAATT-------------T-------------A--AGTC---------------------------C-CTT--G-T---A--CT-CGG
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             851396 24 +   3816255 CGGGGCA-------------G-------------A-AACT----------------------------C-CAC--A-T---A---G-TGG
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg2040                                     427589  4 -    453645 -------------------------------------------------------------------------------------T-CAG
i Galago_moholi.ctg2040                                  I 1 C 0
s Galago_senegalensis.k141_631886                             5279  4 +     11339 -------------------------------------------------------------------------------------T-CAG
i Galago_senegalensis.k141_631886                        I 1 C 0
s Galagoides_demidoff.k141_1711393                            2577  4 +     41679 -------------------------------------------------------------------------------------T-CAG
i Galagoides_demidoff.k141_1711393                       I 1 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               2180 24 -      9135 ctgagct-------------g-------------a--agt----------------------------c-cca--g-t---g--ct-tgc
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     609603 25 -    660261 TCGGGTT-------------T-------------A--AGTC---------------------------C-TAC--G-T---A--CT-TGG
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Gorilla_beringei.k141_3596273                              17083 25 -     32273 CAAGGCT-------------A-------------C--AGG----------------------------T-GCT-CG-T---G--CC-AGG
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186339218 25 + 186649187 CAAGGCT-------------A-------------C--AGG----------------------------T-GCT-CG-T---G--CC-AGG
i Gorilla_gorilla.LT578341.1                             C 0 I 9
s Graphiurus_murinus.GraMur_scaffold_10447                   33610 15 +     78134 -------------------------------------ACT----------------------------C-CAT--A-T---A--CT-TAG
i Graphiurus_murinus.GraMur_scaffold_10447               I 9 C 0
s Hapalemur_alaotrensis.k141_170648                           7829 25 -     19426 CTGAGCT-------------G-------------C--AGC----------------------------C-CCA-GG-T---G--CT-CAC
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             12982 25 -     15286 CTGAGCT-------------G-------------C--AGC----------------------------C-CCA-GG-T---G--CT-CAG
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             14621 25 +     18253 CTGAGCT-------------G-------------C--AGC----------------------------C-CCA-GG-T---G--CT-CAG
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         14722 25 -     41752 CTGAGCT-------------G-------------C--AGC----------------------------C-CCA-GG-T---G--CT-CAG
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         14559 25 -     16460 CTGAGCT-------------G-------------C--AGC----------------------------C-CCA-GG-T---G--CT-CAG
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243324 25 +    327341 TGGAATT-------------T-------------A--AGTC---------------------------C-CAT--G-T---A--CT-TGG
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18807 25 +     36099 TCGGGTT-------------T-------------A--AGTC---------------------------C-TAC--G-T---G--CT-TGG
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20663150 25 +  22651954 TGGGGCT-------------G-------------A-AACT----------------------------C-CAT--G-T---A--CA-TGG
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                1894 12 +      7595 --------------------------------------------------------------------G-TAT--G-T---A--TT-TAG
i Heterohyrax_brucei.HetBruBak_scaffold_122365           I 8 I 1343
s Hipposideros_armiger.JXIK01000431.1                       111500 25 +   1711038 TTGACTT-------------T-------------A--AGTC---------------------------C-CAG--G-T---A--CT-TGG
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               42931 25 +     43066 TTGACTT-------------T-------------A--AGTC---------------------------C-CAG--G-T---A--CT-TGG
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    435884 25 +    630532 CAAGGCT-------------G-------------C--AGG----------------------------T-GCT-CG-T---G--CT-GGG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46027 25 +     55795 CTGAATT-------------T-------------A--AGTC---------------------------C-CAT--G-T---A--CT-TGG
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84046 25 +    135385 CGGGGCT-------------G-------------A-AACT----------------------------C-CAT--G-T---A--CA-TGG
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7521945 24 -   7955117 CTGAG-T-------------G-------------A-AACC----------------------------C-CAT--G-T---A--CT-TGA
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   23516 25 +     31101 CTGAGCT-------------G-------------C--AGC----------------------------C-CCA-GG-T---G--CT-CAG
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               23569 25 +     23964 TCAGGTT-------------T-------------A--AGCC---------------------------C-TAC--A-T---A--CT-TGG
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8278116 14 -   9596543 --------------------------------------TA----------------------------A-CAT--G-G---A--GC-TGG
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                2926 25 -      3359 TCAGGTT-------------T-------------A--AGCC---------------------------T-TAC--A-T---A--CT-CGG
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    17381 17 -     42476 TCAAGTT-------------T-------------A--AGCC---------------------------C-CAG-----------------
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 8
s Lemur_catta.scaffold_24                                 15525074 25 -  30322482 CTGAGCT-------------G-------------C--AGC----------------------------C-CCA-GG-T---G--CT-CAG
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        9004 17 +     64341 CA-GGCT-------------G-------------C--AGG----------------------------T-CCC-CA--------------
i Leontocebus_fuscicollis.k141_1820339                   C 0 I 5
s Leontocebus_illigeri.k141_1304848                           1344 17 -     35062 CA-GGCT-------------G-------------C--AGG----------------------------T-CCC-CA--------------
i Leontocebus_illigeri.k141_1304848                      C 0 I 5
s Leontocebus_nigricollis.k141_4610752                        9031 17 +     35603 CA-GGCT-------------G-------------C--AGG----------------------------T-CCC-CA--------------
i Leontocebus_nigricollis.k141_4610752                   C 0 I 5
s Leontopithecus_chrysomelas.k141_1519602                    30644 17 +     38576 CA-GGCT-------------G-------------C--AGG----------------------------T-CCC-CA--------------
i Leontopithecus_chrysomelas.k141_1519602                C 0 I 5
s Leontopithecus_rosalia.k141_464620                         27348 17 +     66356 CA-GGCT-------------G-------------C--AGG----------------------------T-CCC-CA--------------
i Leontopithecus_rosalia.k141_464620                     C 0 I 5
s Lepilemur_ankaranensis.k141_596936                         11964 24 -     23766 CTGAGCT-------------G-------------C--AGG----------------------------C-C-A-GG-T---A--CT-CAG
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             30018 24 +     45836 CTGAGCT-------------G-------------T--AGG----------------------------C-C-A-GG-T---A--CT-CAG
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          2563 24 +     25010 CTGAGCT-------------G-------------C--AGG----------------------------C-C-A-GG-T---A--CT-CAG
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27958 24 +     54090 CTGAGCT-------------G-------------T--AGG----------------------------C-C-A-GG-T---A--CT-CAG
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3044060 25 +   3914936 ctgagtt-------------t-------------a--agt---------------------------cc-cat--g-t---a--ct-tga
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     7756 13 -     14121 CTAAGCT-------------G-------------A--AGT----------------------------C---------------------
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             268620 25 -    662738 tcaggtt-------------t-------------a--agc---------------------------cc-tac--a-t---a--ct-tgg
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1438234 25 +   1826925 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CA-T---G--CT-GGG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_399337                            15955  4 -     33856 -------------------------------------------------------------------------------------T-CAG
i Loris_lydekkerianus.k141_399337                        I 1 C 0
s Loris_tardigradus.ctg83                                  1013666  4 +   6120653 -------------------------------------------------------------------------------------T-CAG
i Loris_tardigradus.ctg83                                I 1 C 0
s Loxodonta_africana.GL010049.1                            4218955 25 -  43346337 CTAAGTT-------------T-------------A--AGTC---------------------------A-CAT--A-T---G--CT-TAG
i Loxodonta_africana.GL010049.1                          I 532 I 597
s Lycaon_pictus.CM007581.1                                17956323 25 -  59628241 ctgagtt-------------t-------------a--aat---------------------------cc-cat--g-t---a--tt-tga
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               8049 25 +     40492 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CG-T---G--CT-GGG
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59677308 25 +  60120075 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CG-T---G--CT-GGG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13824 25 -     26193 CAAGGCT-------------G-------------C--AGC----------------------------T-GCC-CG-T---G--CT-GGG
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            81608 25 -    114318 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CG-T---G--CT-GGG
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  7295 25 -     23192 CAAGGCT-------------T-------------C--AGG----------------------------T-GCC-CG-T---G--CT-GGG
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16768 25 -     29190 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CG-T---G--CT-GGG
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  25333 25 +     37952 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CG-T---G--CT-GGG
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186840422 25 + 187317192 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CG-T---G--CT-GGG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25458985 25 -  25927173 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CG-T---G--CT-GGG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  81181 25 +     89720 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CG-T---G--CT-GGG
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 8182 25 +     20474 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CG-T---G--CT-GGG
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   7982 25 -     14993 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CG-T---G--CT-GGG
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  330848 25 -    668171 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CG-T---G--CT-GGG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 6295 25 -     24072 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CG-T---G--CT-GGG
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26920 25 -     45290 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CG-T---G--CT-GGG
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91630 25 +     94391 ttgagtg-------------t-------------a--aat---------------------------cc-cac--g-g---c--ct-tgg
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23938511 25 -  24302211 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CA-T---G--CT-GGG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352633 25 +    752769 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CA-T---G--CT-GGG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              19250 25 +    737560 CCCAGTT-------------T-------------A--GGTC---------------------------C-CAG--G-T---A--CT-TGA
i Manis_javanica.JSZB01003497.1                          C 0 I 5
s Manis_pentadactyla.KN006162.1                              51236 25 -    317179 CCCAGTT-------------T-------------A--GGTC---------------------------C-CAG--G-T---A--CT-TGA
i Manis_pentadactyla.KN006162.1                          C 0 I 5
s Marmota_marmota.CZRN01000018.1                          33104244 24 -  40650429 CTGAA-T-------------G-------------A-AACC----------------------------C-TAT--G-T---A--CT-TGA
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        14346 20 -    207569 T----TT-------------T-------------A--AGT----T-----------------------C-AAT--G-T---A--CT--GG
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             11310 25 +     13704 CTGAGTT-------------T-------------A--AGTC---------------------------C-CAT--G-T---A--TT-TGG
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 33696 25 +    140813 CTAAGCT-------------G-------------A-AATC----------------------------C-CAT--G-C---A--AT-TAG
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12183160 25 -  29670104 ctgAGCC-------------A-------------A-AATC----------------------------C-CAT--T-A---A--AT-TGG
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    4237 25 +     10310 TCAGGTT-------------T-------------A--AGCC---------------------------C-TGC--A-T---A--CT-TGG
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Mico_argentatus.k141_1239457                                7161 17 -      7380 CA-GGCT-------------G-------------C--AGG----------------------------T-CCC-CA--------------
i Mico_argentatus.k141_1239457                           C 0 I 5
s Mico_schneideri.k141_1950671                                      7134 17 -      7356 CA-GGCT-------------G-------------C--AGG----------------------------T-CCC-CA--------------
i Mico_schneideri.k141_1950671                                 C 0 I 5
s Microcebus_murinus.CM007674.1                           18292517 24 -  93316391 CTGAGCT-------------G-------------C--AGC----------------------------C-C-A-GG-T---G--CT-CAG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    24483 15 -    145209 --------------------------------------ATC---------------------------C-TAT--G-A---A--CT-TAA
i Microgale_talazaci.MicTal_scaffold_6613                I 6 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                16646 25 -     19307 TCAAGTT-------------T-------------A--AGC----T-----------------------C-CAT--G-T---G--CT-TGG
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11261453 25 -  27267610 TGGAGCT-------------G-------------A-AATC----------------------------C-CAT--G-A---A--AT-CAG
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miopithecus_ogouensis.k141_534055                          10215 25 -     28506 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CA-T---G--CT-GGG
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6927 25 -      8324 CTGAGTT-------------T-------------A--AGTC---------------------------C-CAT--G-T---A--CT-TGA
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                     10060 24 -     37649 CTGAGCT-------------G-------------C--AGC----------------------------A-C-A-GG-T---A--CT-CAG
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    27743 25 -    437263 tcaggtt-------------t-------------a--agc---------------------------cc-tac--a-t---a--ct-tgg
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142648 25 -    366855 TCAAGTT-------------T-------------T--AGG----T-----------------------C-CAT--G-T---G--CT-TTG
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   1684 25 +     82753 tcgggtt-------------t-------------a--agt---------------------------cc-tac--g-t---a--ct-tgg
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           7826 17 +     14753 TCAAGTT-------------T-------------A--AGCC---------------------------C-CAG-----------------
i Murina_feae.MurFea_scaffold_85699                      C 0 I 8
s Mus_caroli.LT608237.1                                   84362312 25 - 120012414 CTAAGCT-------------A-------------A-AATC----------------------------C-CAT--G-C---A--AT-TGG
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87651305 25 - 129401213 CTAAGCT-------------A-------------A-AATC----------------------------C-CCT--G-C---A--AT-TGG
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31355959 25 -  89631738 CTAAGCT-------------A-------------A-AATC----------------------------C-CAT--G-C---A--CT-TGG
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90753368 25 - 130317789 CTAAGCT-------------A-------------A-AATC----------------------------C-CCT--G-C---A--AT-TGG
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               302708 25 -  14710649 CTGAGTT-------------T-------------A--AGTC---------------------------C-CAT--G-T---A--CT-TGG
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     72172 24 -     80779 TG-GGCT-------------G-------------AC-ATT----------------------------C-CAT--G-T---G--CA-TGA
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                281468 17 -  10118263 TCAAGTT-------------T-------------A--AGCC---------------------------C-CAG-----------------
i Myotis_brandtii.KE162005.1                             C 0 I 8
s Myotis_davidii.KB100139.1                                1588723 17 -   6019432 TCAAGTT-------------T-------------A--AGCC---------------------------C-CAG-----------------
i Myotis_davidii.KB100139.1                              C 0 I 8
s Myotis_lucifugus.GL429869.1                              3904820 17 -   4330536 TCAAGTG-------------T-------------A--AGCC---------------------------C-CAG-----------------
i Myotis_lucifugus.GL429869.1                            C 0 I 8
s Myotis_myotis.MyoMyo_scaffold_281845                         971 17 +      1835 TCAAGTT-------------T-------------A--AGCC---------------------------C-CAG-----------------
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 I 8
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190239 25 +    196477 CTGAGTT-------------C-------------A--TGT----T-----------------------C-CTA--G-T---A--TT-TCA
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2035522 25 -   3037898 CTGAACT-------------G-------------G-AATC----------------------------C-CAT--G-C---A--GT-TGG
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               16218 25 +     21681 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-TG-T---A--CT-GGG
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308520 25 +  31847680 ctgagtt-------------t-------------a--agt---------------------------cc-cat--g-t---a--ct-tga
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5866700 25 +   7148211 tcaggtt-------------t-------------a--agc---------------------------cc-tac--a-t---a--ct-tgg
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    758865 25 +    783361 TCAAGGT-------------C-------------A--AGC----T-----------------------G-AAT--G-G---A--CT-TGG
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150385 25 -   9404916 ctgagtt-------------t-------------a--aat---------------------------cc-cat--g-t---a--ct-tga
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102587195  4 - 196305487 -------------------------------------------------------------------------------------T-CAG
i Nycticebus_bengalensis.LG01                            I 1 C 0
s Nycticebus_coucang.k141_1127096                             1119  4 +      2075 -------------------------------------------------------------------------------------T-CAG
i Nycticebus_coucang.k141_1127096                        I 1 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105762550  4 + 199412804 -------------------------------------------------------------------------------------T-CAG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 1 C 0
s Ochotona_princeps.JH802162.1                             1365182 41 +   3988456 CTCAGTT-------------A-------------C--TGTCCCATGTACCTGTTTGAGCATGCTTAGCC---------------------
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              507665 25 -   2017862 ctgagtt-------------t-------------a--agt---------------------------cc-cat--g-t---a--ct-tgg
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          77516 25 -    150152 TCGGGTT-------------T-------------A--AGTC---------------------------C-TAC--G-T---A--CT-TGG
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   26102 25 +     28053 TGGAGCT-------------G-------------A-AATC----------------------------C-CAT--G-A---A--AT-TGG
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    81139 25 +    102263 CTGAGCT-------------G-------------A-AATC----------------------------C-CAT--G-A---A--AT-TGG
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2782623 25 -  10937097 TCAGGTT-------------T-------------A--AGCC---------------------------C-TAC--A-T---A--CT-TGG
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387              11124 25 -     18566 ctaagtt-------------t-------------a--agt---------------------------cc-cat--g-t---a--ct-tag
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67148657 13 + 174332312 CTAAGCT-------------A-------------A--AGT----------------------------C---------------------
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       463335 25 -    559221 ctgagtt-------------t-------------a--aat---------------------------cc-cat--g-t---a--ct-tga
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         5104  4 +      8798 -------------------------------------------------------------------------------------T-CAG
i Otolemur_crassicaudatus.k141_222918                    I 1 C 0
s Otolemur_garnettii.GL873799.1                             697266  4 -   1103335 -------------------------------------------------------------------------------------T-CAG
i Otolemur_garnettii.GL873799.1                          I 1 C 0
s Ovis_aries.CM001607.2                                   17586782 25 +  44047080 tcgggtt-------------t-------------a--agt---------------------------cc-tac--g-t---g--ct-tgg
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      174759 25 -    191736 tcgggtt-------------t-------------a--agt---------------------------cc-tac--g-t---g--ct-tgg
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    45171 25 +     80009 CAAGGCT-------------G-------------C--AAG----------------------------T-GCT-CG-T---G--CC-AGG
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189144069 25 + 189151597 CAAGGCT-------------G-------------C--AAG----------------------------T-GCT-CG-T---G--CC-AGG
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152149 25 +    230217 CTAAATT-------------T-------------A--AGTC---------------------------C-CTT--G-T---A--CT-CGG
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                265358 25 +  18783137 CTAAATT-------------T-------------A--AGTC---------------------------C-CTT--G-T---A--CT-CGG
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4722238 25 -   8748460 CTAAATT-------------T-------------A--AGTC---------------------------C-CTT--G-T---A--CT-CGG
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1265677 25 -   2937107 tcgggtt-------------t-------------a--agt---------------------------cc-tac--g-t---g--ct-tgg
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183444311 25 + 183742232 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CA-T---G--CT-GGG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7957 25 +     20448 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CA-T---G--CT-GGG
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20564769 25 +  20919399 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CA-T---G--CT-GGG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6701 25 +     41871 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CA-T---G--CT-GGG
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                     9994 25 +     27711 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CA-T---G--CT-GGG
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                   991 25 -     11374 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CA-T---G--CT-GGG
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13644 25 -     78924 CTGAATT-------------T-------------A--AGTC---------------------------C-CAT--G-T---A--CT-TGG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           11095  4 +     13100 -------------------------------------------------------------------------------------T-CTG
i Perodicticus_ibeanus.k141_855320                       I 1 C 0
s Perodicticus_potto.k141_1092580                             9489  4 +     25941 -------------------------------------------------------------------------------------T-CAG
i Perodicticus_potto.k141_1092580                        I 1 C 0
s Peromyscus_maniculatus.KI615324.1                       18195718 25 -  18517816 CTGAGCT-------------G-------------A-AATC----------------------------C-CAT--G-A---A--AT-TGG
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     29057 38 -     29689 TGGGGCACTTAGTAATATTAT-------------T-AATT----------------------------C-CAT--G-T---A--CG-TGG
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               9662 25 +     63832 tcaggtt-------------t-------------a--agc---------------------------cc-tac--a-t---t--ct-tgg
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           44710 25 +     62158 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CG-T---A--CT-GGG
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        39457 25 +     89929 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CG-T---A--CT-GGG
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40873 25 +     51399 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-CG-T---A--CT-GGG
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14297112 25 -  14605196 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-TG-T---A--CT-GGG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2760 17 +     22620 TCAAGTT-------------T-------------A--AGCC---------------------------C-CAG-----------------
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 8
s Platanista_gangetica.PlaMin_flattened_line_32310           35363 25 +     35617 TCAGGTT-------------T-------------A--AGCC---------------------------C-TAT--A-T---A--CT-TGG
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189132214 25 + 189387572 CAAGGCT-------------G-------------C--AGG----------------------------T-GCT-CG-T---G--CT-GGG
i Pongo_abelii.CM009266.2                                C 0 I 24611
s Pongo_pygmaeus.ctg66                                     9571821 25 +   9816681 CAAGGCT-------------G-------------C--AGG----------------------------T-GCT-CG-T---G--CT-GGG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               74393 25 -     81375 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-TG-T---A--CT-GGG
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              6214 25 +     19060 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-TG-T---A--CT-GGG
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 14349 12 -     22811 --------------------------------------------------------------------G-TAT--G-T---A--TT-TAG
i Procavia_capensis.ProCapCap_scaffold_85530             I 8 I 1341
s Prolemur_simus.MPIZ01000396.1                            2597754 25 -   4620579 CTGAGCT-------------G-------------C--AGC----------------------------C-CCA-GG-T---G--CT-CAG
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     991736 26 +   2598838 CTGAGCT-------------G-------------C--AGC----------------------------C-CCAGGG-T---G--CT-CAG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          30048 26 +     38485 CTGAGCT-------------G-------------C--AGC----------------------------C-CCAGGG-T---G--CT-CAG
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              2090 26 -     13098 CTGAGCT-------------G-------------C--AGC----------------------------C-CCAGGG-T---G--CT-CAG
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          27569 26 +     35766 CTGAGCT-------------G-------------C--AGC----------------------------C-CCAGGG-T---G--CT-CAG
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           5756 26 -     24134 CTGAGCT-------------G-------------C--AGC----------------------------C-CCAGGG-T---G--CT-CAG
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        29581 26 -     67325 CTGAGCT-------------G-------------C--AGC----------------------------C-CCAGGG-T---G--CT-CAG
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           5804 26 -      6182 CTGAGCT-------------G-------------C--AGC----------------------------C-CCAGGG-T---G--CT-CAG
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            11342 25 -     21651 CTAGGCT-------------G-------------A-AATC----------------------------C-CAT--G-C---A--AT-TAG
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            16157 12 -     21811 --------------------------------------------------------------------C-CAC--A-T---G--CT-TGG
i Pteronotus_parnellii.KE909381.1                        I 6 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41517 25 +     42204 ctgagtt-------------t-------------a--agt---------------------------cc-cat--g-t---a--ct-tga
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22977771 25 +  28871421 ttgagtg-------------t-------------a--aat---------------------------cc-cac--g-g---a--ct-tag
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                7824 25 -      8028 tcgagtg-------------t-------------a--aat---------------------------cc-cac--a-g---a--ct-tgg
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20275310 25 -  38429054 CTAAATG-------------T-------------A--AGTC---------------------------C-CTT--G-T---A--CT-CGG
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             16200 25 -     91421 CAAGGGG-------------G-------------C--AGG----------------------------T-GCC-TG-T---A--CT-GGG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7610320 25 +   7812017 CAAGGGG-------------G-------------C--AGG----------------------------T-GCC-TG-T---A--CT-GGG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             16199 25 -     72585 CAAGGGG-------------G-------------C--AGG----------------------------T-GCC-TG-T---A--CT-GGG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6259 25 +     55207 TTGGGTT-------------T-------------A--AGTC---------------------------C-TAC--A-T---A--CT-TGG
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53571558 25 +  90668790 CTAAACT-------------G-------------A-AATC----------------------------C-CAT--G-C---A--AT-TGA
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        367987 25 -   3329780 tttagtt-------------t-------------a--agt---------------------------cc-cat--g-t---a--ct-tgg
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             7910 25 -     11128 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-TG-T---A--CT-GGG
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91237259 25 - 195417433 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-TG-T---A--CT-GGG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672915 25 +   7961872 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-TG-T---A--CT-GGG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88813 25 -     96226 tcaagtg-------------t-------------a--aat---------------------------cc-cac--g-g---a--ct-ttg
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_8081                                  2314 17 +     42994 CA-GGCT-------------G-------------C--AGG----------------------------T-CCC-CA--------------
i Saguinus_bicolor.k141_8081                             C 0 I 5
s Saguinus_imperator.k141_1496743                             1013 17 +      2253 CA-GGCT-------------G-------------C--AGG----------------------------T-CCC-CA--------------
i Saguinus_imperator.k141_1496743                        C 0 I 5
s Saguinus_inustus.k141_3945547                               1442 17 -      8737 CA-GGCT-------------G-------------C--AGG----------------------------T-CCC-CA--------------
i Saguinus_inustus.k141_3945547                          C 0 I 5
s Saguinus_labiatus.k141_4004060                              1095 17 +      2343 CA-GGCT-------------G-------------C--AGG----------------------------T-CCC-CA--------------
i Saguinus_labiatus.k141_4004060                         C 0 I 5
s Saguinus_midas.LG03                                    209475972 17 + 209938924 CA-GGCT-------------G-------------C--AGG----------------------------T-CCC-CA--------------
i Saguinus_midas.LG03                                    C 0 I 5
s Saguinus_mystax.k141_4699220                                 418 17 -      7576 CA-GGCT-------------G-------------C--AGG----------------------------T-CCC-CA--------------
i Saguinus_mystax.k141_4699220                           C 0 I 5
s Saimiri_boliviensis.NW_024100920.1                     119952041 17 - 121099817 CA-GGGT-------------G-------------T--ATG----------------------------T-CCC-CA--------------
i Saimiri_boliviensis.NW_024100920.1                     C 0 I 5
s Saimiri_cassiquiarensis.k141_2188234                       24383 17 +     46362 CA-GGGT-------------G-------------T--ATG----------------------------T-CCC-CA--------------
i Saimiri_cassiquiarensis.k141_2188234                   C 0 I 5
s Saimiri_macrodon.k141_716185                               24478 17 +     45824 CA-GGGT-------------G-------------T--ATG----------------------------T-CCC-CA--------------
i Saimiri_macrodon.k141_716185                           C 0 I 5
s Saimiri_oerstedii.k141_1487881                             41157 17 -     64574 CA-GGGT-------------G-------------T--ATG----------------------------T-CCC-CA--------------
i Saimiri_oerstedii.k141_1487881                         C 0 I 5
s Saimiri_sciureus.k141_2278166                               4230 17 -     23631 CA-GGGT-------------G-------------T--ATG----------------------------T-CCC-CA--------------
i Saimiri_sciureus.k141_2278166                          C 0 I 5
s Saimiri_ustus.k141_1484609                                 24374 17 -     61129 CA-GGGT-------------G-------------T--ATG----------------------------T-CCC-CA--------------
i Saimiri_ustus.k141_1484609                             C 0 I 5
s Sapajus_apella.ctg103                                    5421723 16 -   5703754 CA-TG-T-------------G-------------C--AGG----------------------------T-CCC-CA--------------
i Sapajus_apella.ctg103                                  C 0 I 5
s Sapajus_macrocephalus.k141_351809                          56964 16 -     80660 CA-TG-T-------------G-------------C--AGG----------------------------T-CCC-CA--------------
i Sapajus_macrocephalus.k141_351809                      C 0 I 5
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154205 11 -    313613 ----------------------------------------------------------------------CAT--G-T---A--CT-TGA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 13 C 0
s Semnopithecus_entellus.k141_1672505                         1091 25 -     12572 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-TG-T---A--CT-GGG
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27941 25 +     39453 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-TG-T---A--CT-GGG
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            8459 25 +     27826 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-TG-T---A--CT-GGG
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             7981 25 -     19483 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-TG-T---A--CT-GGG
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      1282 25 -     12762 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-TG-T---A--CT-GGG
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           1143 25 +     13763 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-TG-T---A--CT-GGT
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     1256 10 -     30804 -----------------------------------------------------------------------AT--G-A---A--AC-TGG
i Sigmodon_hispidus.SigHis_scaffold_42075                I 5 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               4750 25 +   1910179 CCAAGTT-------------T-------------A--CGT----T-----------------------C-TGT--G-C---A--TT-TGG
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13651991 25 -  18376816 CCAAATT-------------T-------------A--AGTC---------------------------C-CAC--A-G---A--CA-TAA
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1955092 24 -   3870691 CTGAG-T-------------G-------------A-AACC----------------------------C-CAT--G-T---A--CT-TGA
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             31989 25 +     97271 CTGAGTT-------------T-------------A--AGCC---------------------------C-CAT--G-T---A--CG-TGT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              19329 25 -    196729 TGGAATG-------------T-------------A--AGTC---------------------------C-CAT--G-T---A--CT-TGG
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.JH118708.1                                      37394 25 -     47482 TCACGTT-------------T-------------A--AGTC---------------------------C-TAC--A-T---A--CT-TGG
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                11815 17 +     41958 TCAAGTT-------------T-------------A--AGGC---------------------------C-CGG-----------------
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 6
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73604 25 +    116680 CTGAGTT-------------C-------------A--TGT----T-----------------------C-CTA--G-T---A--TT-TCA
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      119772 25 -    156842 ccgagtt-------------t-------------a--agg---------------------------cc-cac--g-t---a--ct-tcg
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    388242 25 +    539355 ccgagtt-------------t-------------a--agg---------------------------cc-cat--g-t---a--ct-tcg
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Theropithecus_gelada.CM009954.1                        186429629 25 + 186847797 CAAGGCT-------------G-------------C--GGG----------------------------T-GCC-CA-T---G--CT-GGG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106362 25 +    114563 TTTAGCC-------------G-------------A-AATT----------------------------C-CAC--G-G---A--CA-TGG
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   7356 16 +      8208 ----------------------------------G--AGT----------------------------C-CGT--G-G---A--CT-TGG
i Tolypeutes_matacus.TolMat_scaffold_228639              I 6 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     82202 25 +    610378 tcaagtt-------------t-------------a--agc---------------------------tc-cat--g-t---g--ct-tgg
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         12032 25 -     20410 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-TG-T---A--CT-GGG
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      1146 25 -     12674 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-TG-T---A--CT-GGG
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       12133 25 +     19930 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-TG-T---A--CT-GGG
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       8544 25 -     19997 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-TG-T---A--CT-GGG
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48683 25 -     60166 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-TG-T---A--CT-GGG
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        16155 25 -     27529 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-TG-T---A--CT-GGG
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     16099 25 -     18194 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-TG-T---A--CT-GGG
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9811 25 -     21137 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-TG-T---A--CT-GGG
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    8514 25 -     10723 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-TG-T---A--CT-GGG
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7686 25 +      9834 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-TG-T---A--CT-GGG
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        25999 25 +     32220 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-TG-T---A--CT-GGG
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5940101 25 +   6242583 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-TG-T---A--CT-GGG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        9352 25 +     20839 CAAGGCT-------------G-------------C--AGG----------------------------T-GCC-TG-T---A--CT-GGG
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                     616 25 +     27266 TCAGGTT-------------T-------------A--AGTC---------------------------C-TAC--A-T---A--CT-TGG
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Trichechus_manatus.JH594705.1                            4294262 25 +  10818551 CTAAGTT-------------T-------------A--AGCC---------------------------C-CAT--A-T---A--CT-TAG
i Trichechus_manatus.JH594705.1                          I 1 I 578
s Tupaia_chinensis.KB320699.1                              2156775 25 +   4065304 CTGAGCT-------------C-------------G--AGT----------------------------C-CCA--CTC---A--CC-TGG
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                    10221 25 -     10553 CTGAGTT-------------C-------------G--AGT----------------------------C-CCA--CTC---A--CC-TGG
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15738868 25 +  33153633 TCAGGTT-------------T-------------A--AGCC---------------------------C-TAC--A-T---A--CT-TGG
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54289 25 -     77625 ccaagtt-------------t-------------a--agt---------------------------tc-cac--a-t---a--ct-tgg
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4851434 25 -   5085361 CTAAGTT-------------T-------------A--ATTC---------------------------C-CAT--G-T---A--CT-TGG
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  12413 25 +     50397 CTGAGCT-------------G-------------T--AGC----------------------------C-CCA-GG-T---G--TT-CAG
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             12472 25 +     24756 CTGAGCT-------------G-------------T--AGC----------------------------C-CCA-GG-T---G--TT-CAG
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5372758 25 -   5488506 TCGAGTT-------------C-------------G--AGTC---------------------------C-TAC--G-T---A--CT-TGG
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 11783 25 -     43706 ctgagtt-------------t-------------a--aat---------------------------cc-cat--g-t---a--ct-tga
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          2065 25 +    224448 CTGAG-T-------------G---------G---A-AATC----------------------------C-CAT--A-T---A--CT-TGG
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      15852 14 +     63895 --------------------------------------TA----------------------------A-CAT--G-G---A--GT-TGT
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_3601914            215 25 +       295 TCAGGTT-------------T-------------A--AGCC---------------------------C-TAC--A-T---A--CT-TGG
i Ziphius_cavirostris.ZipCav_flattened_line_3601914      C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Tarsius_wallacei.k141_254427                                1877  3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080  3 +     70052 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             35221  4 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1851541  4 +   8254450 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Glis_glis.GliGli_scaffold_19807                            32063  0 +     49224 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cercocebus_lunulatus.k141_3342297                           1812  0 -     14043 C
e Cephalopachus_bancanus.k141_1423433                         6085  3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Carlito_syrichta.NW_007259797.1                           156587  3 -    496798 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       7853  9 +     62944 CTAAGCCT-G
s Acinonyx_jubatus.LLWD01001279.1                           828327  7 -   1699592 TAAAGTA---
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     71756  9 +     87051 TAAGGGTT-G
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511612  9 -  29979442 TTAGGCCT-A
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             80671  9 -    347723 ttaggcct-c
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     75468  9 -     89534 TAAAGTTT-A
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   15779  9 -     52922 CTAAGCCT-G
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15699  9 -     28001 CTAAGCCT-G
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          6197  9 -     18505 CTAAGCCT-G
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           7049  9 -     12518 CTAAGCCT-G
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              8622  9 +     51355 TTAGGCCT-G
i Alouatta_belzebul.k141_3560514                         I 5 C 0
s Alouatta_caraya.k141_1701091                                1731  9 -     36483 TTAGGCCT-G
i Alouatta_caraya.k141_1701091                           I 5 C 0
s Alouatta_discolor.k141_566626                              12183  9 +     28687 TTAGGCCT-G
i Alouatta_discolor.k141_566626                          I 5 C 0
s Alouatta_juara.k141_1302312                                  696  9 +     27940 TTAGGCCT-G
i Alouatta_juara.k141_1302312                            I 5 C 0
s Alouatta_macconnelli.k141_918386                            1740  9 -      9457 TTAGGCCT-G
i Alouatta_macconnelli.k141_918386                       I 5 C 0
s Alouatta_nigerrima.k141_1929159                              696  9 +     30492 TTAGGCCT-G
i Alouatta_nigerrima.k141_1929159                        I 5 C 0
s Alouatta_palliata.k141_2135620                              4691  9 +     47717 TTAGGCCT-G
i Alouatta_palliata.k141_2135620                         I 5 C 0
s Alouatta_puruensis.k141_362188                              1423  9 +      5663 TTAGGCCT-G
i Alouatta_puruensis.k141_362188                         I 5 C 0
s Alouatta_seniculus.k141_117119                             15875  9 +     50774 TTAGGCCT-G
i Alouatta_seniculus.k141_117119                         I 5 C 0
s Ammotragus_lervia.NIVO01071767.1                          676509  9 -   2318259 tcaagcct-g
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      186383  9 +    412891 ttaaaatg-g
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             98990  9 -    100397 TCAAGCCT-G
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aotus_azarae.k141_3104676                                  16863  9 -     33861 TGAAGCCT-G
i Aotus_azarae.k141_3104676                              I 5 C 0
s Aotus_griseimembra.k141_2240599                            16860  9 -     34016 TGAAGCCT-G
i Aotus_griseimembra.k141_2240599                        I 5 C 0
s Aotus_nancymaae.KZ198451.1                               4299287  9 -   5030052 TGAAGCCT-G
i Aotus_nancymaae.KZ198451.1                             I 5 C 0
s Aotus_trivirgatus.k141_2152450                             16896  9 -     34685 TGAAGCCT-G
i Aotus_trivirgatus.k141_2152450                         I 5 C 0
s Aotus_vociferans.k141_344750                               30021  9 -     47192 TGAAGCCT-G
i Aotus_vociferans.k141_344750                           I 5 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13628  9 +     20879 TAAAGTTT-G
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_2318572                       12290  9 +     14667 CTAAGTCT-G
i Arctocebus_calabarensis.k141_2318572                   C 0 I 3
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5765  9 +     43469 TTAAAATG-A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Avahi_laniger.k141_765380                                  54718  9 -     92717 CTAAGCCT-G
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              55349  9 +     85213 CTAAGCCT-G
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15192741  9 +  23207421 TCAAGCCT-G
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         3206  9 -     18090 TCAAGCCT-G
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    27431  9 +     34529 TCAAGCCT-G
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    200489  9 -    288883 tcaagcct-g
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003028.1                                  18363393  9 - 116941312 TCAAGCCT-G
i Bos_indicus.CM003028.1                                 I 25 C 0
s Bos_mutus.JH880303.1                                     1126249  9 -   1948126 tcaagcct-g
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000184.6                                   18200367  9 - 114055384 TCAAGCCT-G
i Bos_taurus.CM000184.6                                  I 25 C 0
s Bubalus_bubalis.KI419123.1                               2819999  9 +   4408762 tcaagcct-g
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Callibella_humilis.k141_1278103                             6747  3 -     10423 TTA-------
i Callibella_humilis.k141_1278103                        I 5 C 0
s Callimico_goeldii.k141_737284                                291  3 -     31217 TTA-------
i Callimico_goeldii.k141_737284                          I 5 C 0
s Callithrix_geoffroyi.k119_69176                              586  3 +      5377 CTA-------
i Callithrix_geoffroyi.k119_69176                        I 5 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592447  3 - 189096842 CTA-------
i Callithrix_jacchus.pat_scaffold_3                      I 5 C 0
s Callithrix_kuhlii.k119_1168854                              1261  3 -     12329 CTA-------
i Callithrix_kuhlii.k119_1168854                         I 5 C 0
s Camelus_bactrianus.KN276810.1                           10003257  9 -  17673402 TGAAGTCT-G
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2335733  9 -   7040546 TGAAGTCT-G
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  404032  9 -   1652518 TGAAGTCT-G
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17800189  9 -  60362399 ttaggcct-a
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                      937  9 -     43241 ttaggcct-a
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9035632  9 -   9314153 ttaggcct-a
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17960108  9 -  59632846 ttaggcct-a
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18501405  9 +  63665305 ttaggcct-a
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18830627  9 +  46296322 tcaagcct-g
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18061347  9 -  44709034 TCAAGCCT-G
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    2014  9 -     12242 TGCATGCT-G
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6134  9 -     11696 GTAAAATG-G
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138313  9 +    179628 taaaacct-g
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     94560  9 +    217609 TCAAGCCT-G
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                         11187  3 -     11392 TTA-------
i Cebuella_niveiventris.k141_1251222                     I 5 C 0
s Cebuella_pygmaea.k141_1309012                               7371  3 -      7577 TTA-------
i Cebuella_pygmaea.k141_1309012                          I 5 C 0
s Cebus_albifrons.Contig27                                25653790  9 +  26074798 TGAGGCCT-G
i Cebus_albifrons.Contig27                               I 5 C 0
s Cebus_olivaceus.k141_1764483                                1728  9 +     28840 TGAGGCCT-G
i Cebus_olivaceus.k141_1764483                           I 5 C 0
s Cebus_unicolor.k141_1837183                                 1457  9 +     14051 TGAGGCCT-G
i Cebus_unicolor.k141_1837183                            I 5 C 0
s Ceratotherium_simum.JH767749.1                          12232491  9 +  27778364 TTAAGCCT-G
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3518  9 -     25243 TTAAGCCT-G
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4476716  9 +   4669795 CTAAGCCT-G
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        1218  9 +     17872 CTAAGCCT-G
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           1812  4 -     14043 -----CCT-G
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9908  9 +     27781 CTAAGCCT-G
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        10076  9 -     20310 CTAAGCCT-G
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          13056  9 +     29689 CTAAGCCT-G
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7802  9 -     20078 CTAAGCCT-G
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          15724  9 -     27936 CTAAGCCT-G
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            4590  9 -     17152 CTAAGCCT-G
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38818135  9 +  39242232 CTAAGCCT-G
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223824  9 -  21565898 CTAAGCCT-G
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40943  9 -     53127 CTAAGCCT-G
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        1194  9 +     13442 CTAAGCCT-G
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15743  9 -     27947 CTAAGCCT-G
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         15719  9 +     17596 CTAAGCCT-G
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          1762  9 +     14005 CTAAGCCT-G
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1485  5 -      8501 ----GCCT-G
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheirogaleus_major.k141_333249                             22096  9 -     52598 CTAAGCCT-G
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           17467  9 +     57038 CTAAGCCT-G
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1253891  9 +   2543920 TGAAGCCT-A
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2206961                           2065  6 -     15524 ---AGACG-G
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18429701  9 -  18827391 CTAAGCCT-G
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       16137  9 -     50209 CTAAGCCT-G
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135423138  9 + 135778131 CTAAGCCT-G
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 19322  5 +     19366 TTAAG-----
i Choloepus_didactylus.ChoDid_scaffold_45914             C 0 I 3
s Choloepus_hoffmanni.KN194906.1                            174396  5 +    839153 TTAAG-----
i Choloepus_hoffmanni.KN194906.1                         C 0 I 3
s Colobus_angolensis.KN981557.1                            1911616  9 +   2368649 CTAAGCCT-G
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949868  9 + 200372422 CTAAGCCT-G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              38150  9 +     84244 CTAAGCCT-G
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549064  9 -  53390261 GTACGTCT-G
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1496  9 +     23735 TTAAGCTG-G
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 51035  9 +     63868 TTAGGGTT-A
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11668523  9 + 224834208 TGAGGGTT-A
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               3954  9 -     19598 TAAATTCT-G
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29510  7 -     87169 TCAAATC---
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    838082  9 +   1526836 AAAAACCT-G
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  36880  8 +     51376 TCTAT-CT-A
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            64502  5 +   2246927 ----GCCT-G
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12538294  9 -  12879189 CTAAGCCC-A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16812379  9 +  35494412 tcaagcct-g
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8631131  9 +  20541912 TTAGAACA-G
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  674339  9 +   1390856 TTAAGCCT-G
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    7091  9 +    198055 TTAAGCCT-G
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37366  9 +     67921 TAAATCCT-A
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Echinops_telfairi.JH980293.1                            48781785  7 + 111700974 TTAAGCT---
i Echinops_telfairi.JH980293.1                           C 0 I 2
s Eidolon_helvum.KE759718.1                                  11562  9 +     11740 ttaagcct-g
i Eidolon_helvum.KE759718.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       311664  9 +    607251 TCAAGCCT-G
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1098737  9 +  10337057 TTAGGTGT-A
i Elephantulus_edwardii.JH947257.1                       C 0 I 2047
s Ellobius_lutescens.LOEQ01008920.1                          21493  9 -    110024 TGAGGGTA-A
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                            1399  9 +      8657 TGAGGGTA-A
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16330624  9 -  41312741 TTAGGCCT-A
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2146748  9 -  14770903 TTAAATGG-C
i Eptesicus_fuscus.JH977646.1                            I 8 C 0
s Equus_asinus.JREZ01000139.1                              1284607  9 +   4378816 TTAAATCT-G
i Equus_asinus.JREZ01000139.1                            I 6 C 0
s Equus_caballus.CM000403.2                               18532414  9 -  39960074 TTAAACCT-G
i Equus_caballus.CM000403.2                              I 6 C 0
s Equus_przewalskii.KK951119.1                               34443  9 +    498745 TTAAACCT-G
i Equus_przewalskii.KK951119.1                           I 6 C 0
s Erythrocebus_patas.Contig38                             21206306  9 -  21539334 CTAAGCCT-G
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12053  9 +    133382 tcaagcct-g
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             25990  9 -     44125 TCAAGCCT-G
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Eulemur_albifrons.k141_576796                              41146  9 -     44621 CTAAGCCT-G
i Eulemur_albifrons.k141_576796                          C 0 C 0
s Eulemur_collaris.k141_377015                                7527  9 -     16928 CTAAGCCT-G
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              16559  9 -     25546 CTAAGCCT-G
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            13755  9 +     26330 CTAAGCCT-G
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14990  9 +     23973 CTAAGCCT-G
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                13752  9 +     75513 CTAAGCCT-G
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 11682  9 +     97555 CTAAGCCT-G
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                             1174  9 +     13026 CTAAGCCT-G
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  5226  9 -     17153 CTAAGCCT-G
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              14799  9 +    111500 CTAAGCCT-G
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20237969  7 + 206538554 TAAAGTA---
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20196812  7 + 205367284 TAAAGTA---
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 10566  7 -     36744 TAAAGTA---
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             851420  9 +   3816255 TCAATTCT-G
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg2040                                     427593  9 -    453645 CTAAGCCT-G
i Galago_moholi.ctg2040                                  C 0 I 3
s Galago_senegalensis.k141_631886                             5283  9 +     11339 CTAAGCCT-G
i Galago_senegalensis.k141_631886                        C 0 I 3
s Galagoides_demidoff.k141_1711393                            2581  9 +     41679 CTAAGCCT-G
i Galagoides_demidoff.k141_1711393                       C 0 I 3
s Galeopterus_variegatus.GalVar_scaffold_108840               2204  9 -      9135 ttaagcct-g
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     609628  9 -    660261 TCAAGCCT-G
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Gorilla_beringei.k141_3596273                              17108  9 -     32273 CTAAGCCT-G
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578336.1                              33188710  9 -  33314783 CTAAGCCT-G
i Gorilla_gorilla.LT578336.1                             I 117 I 1703
s Graphiurus_murinus.GraMur_scaffold_10447                   33625  9 +     78134 GAAAGTAT-G
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           7854  9 -     19426 CTAAGCCT-G
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             13007  9 -     15286 CTAAGCCT-G
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             14646  9 +     18253 CTAAGCCT-G
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         14747  9 -     41752 CTAAGCCT-G
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         14584  9 -     16460 CTAAGCCT-G
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243349  7 +    327341 CCAAGTC---
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18832  9 +     36099 TCAAGCCT-G
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20663175  9 +  22651954 TAAATCCT-G
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                3249  9 +      7595 TTAAACAT-G
i Heterohyrax_brucei.HetBruBak_scaffold_122365           I 1343 C 0
s Hipposideros_armiger.JXIK01000431.1                       111525  9 +   1711038 CTAAGCCT-G
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_29171               42956  9 +     43066 CTAAGCCT-G
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 C 0
s Hoolock_leuconedys.ctg274                                    435909  9 +    630532 CTAAGCCT-G
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46052  7 +     55795 TGAAGAT---
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84071  9 +    135385 TCAGTCCT-G
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7521969  9 -   7955117 TAAAGTCT-G
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   23541  9 +     31101 CTAAGCCC-A
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               23594  9 +     23964 TCAAGCCT-G
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8278130  9 -   9596543 TAGAGGTT-A
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                2951  9 -      3359 TCAAGCCT-G
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    17406  9 -     42476 TTAAATGG-C
i Lasiurus_borealis.LasBor_scaffold_32767                I 8 C 0
s Lemur_catta.scaffold_24                                 15525099  9 -  30322482 CTAAGCCT-G
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        9026  3 +     64341 TCA-------
i Leontocebus_fuscicollis.k141_1820339                   I 5 C 0
s Leontocebus_illigeri.k141_1304848                           1366  3 -     35062 TCA-------
i Leontocebus_illigeri.k141_1304848                      I 5 C 0
s Leontocebus_nigricollis.k141_4610752                        9053  3 +     35603 TCA-------
i Leontocebus_nigricollis.k141_4610752                   I 5 C 0
s Leontopithecus_chrysomelas.k141_1519602                    30666  3 +     38576 TTA-------
i Leontopithecus_chrysomelas.k141_1519602                I 5 C 0
s Leontopithecus_rosalia.k141_464620                         27370  3 +     66356 TTA-------
i Leontopithecus_rosalia.k141_464620                     I 5 C 0
s Lepilemur_ankaranensis.k141_596936                         11988  9 -     23766 CTAACCCT-G
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             30042  9 +     45836 CTAACCCT-G
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          2587  9 +     25010 CTAAGCCT-G
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27982  9 +     54090 CTAACCCT-G
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3044085  9 +   3914936 ttaggcct-a
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             268645  9 -    662738 tcaagcct-g
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1438259  9 +   1826925 CTAAGCCT-G
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_399337                            15959  9 -     33856 CTAAGCCT-G
i Loris_lydekkerianus.k141_399337                        C 0 I 3
s Loris_tardigradus.ctg83                                  1013670  9 +   6120653 CTAAGCCT-G
i Loris_tardigradus.ctg83                                C 0 I 3
s Loxodonta_africana.GL010049.1                            4219577  9 -  43346337 CTAAGCCT-A
i Loxodonta_africana.GL010049.1                          I 597 C 0
s Lycaon_pictus.CM007581.1                                17956348  9 -  59628241 ttaggcct-a
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                               8074  9 +     40492 CTAAGCCT-G
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59677333  9 +  60120075 CTAAGCCT-G
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13849  9 -     26193 CTAAGCCT-G
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            81633  9 -    114318 CTAAGCCT-G
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  7320  9 -     23192 CTAAGCCT-G
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16793  9 -     29190 CTAAGCCT-G
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  25358  9 +     37952 CTAAGCCT-G
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186840447  9 + 187317192 CTAAGCCT-G
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25459010  9 -  25927173 CTAAGCCT-G
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  81206  9 +     89720 CTAAGCCT-G
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 8207  9 +     20474 CTAAGCCT-G
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   8007  9 -     14993 CTAAGCCT-G
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  330873  9 -    668171 CTAAGCCT-G
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 6320  9 -     24072 CTAAGCCT-G
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26945  9 -     45290 CTAAGCCT-G
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91655  9 +     94391 gtaagtct-g
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23938536  9 -  24302211 CTAAGCCT-G
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352658  9 +    752769 CTAAGCCT-G
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              19280  9 +    737560 GTAAGCCT-G
i Manis_javanica.JSZB01003497.1                          I 5 C 0
s Manis_pentadactyla.KN006162.1                              51266  9 -    317179 GTAAGCCT-G
i Manis_pentadactyla.KN006162.1                          I 5 C 0
s Marmota_marmota.CZRN01000018.1                          33104268  3 -  40650429 TAA-------
i Marmota_marmota.CZRN01000018.1                         C 0 I 2
s Megaderma_lyra.MegLyr_scaffold_4542                        14366  9 -    207569 TTAGGCTG-G
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             11335  9 +     13704 TTAGGCCT-A
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 33721  9 +    140813 TAAGGATT-T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12183185  9 -  29670104 TGAGGGTT-A
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    4262  9 +     10310 TCAAGCCT-G
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Mico_argentatus.k141_1239457                                7183  3 -      7380 TTA-------
i Mico_argentatus.k141_1239457                           I 5 C 0
s Mico_schneideri.k141_1950671                                      7156  3 -      7356 TTA-------
i Mico_schneideri.k141_1950671                                 I 5 C 0
s Microcebus_murinus.CM007674.1                           18292541  9 -  93316391 CCAAACCT-G
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    24498  7 -    145209 TTAAGCG---
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 2
s Micronycteris_hirsuta.MicHir_scaffold_52381                16671  9 -     19307 TTAAAATG-G
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 213
s Microtus_ochrogaster.CM001695.1                         11261478  9 -  27267610 TGAGGGTA-A
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miopithecus_ogouensis.k141_534055                          10240  9 -     28506 CTAAGCCT-G
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6952  9 -      8324 TTAGGCCT-A
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Mirza_zaza.k141_952172                                     10084  9 -     37649 CTAAACCT-A
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    27768  9 -    437263 tcaagcct-g
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142673  9 -    366855 TCAAAACT-G
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   1709  9 +     82753 tcaagcct-g
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           7851  9 +     14753 TTACATGA-C
i Murina_feae.MurFea_scaffold_85699                      I 8 C 0
s Mus_caroli.LT608237.1                                   84362337  9 - 120012414 TAAGGGTT-G
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87651330  9 - 129401213 TAAGGGTT-G
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31355984  9 -  89631738 TAATGGTT-G
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90753393  9 - 130317789 TAAGGGTT-G
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               302733  9 -  14710649 TTAGGTCT-A
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     72196  9 -     80779 TGCATGCT-A
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                281493  9 -  10118263 TTAAATGG-C
i Myotis_brandtii.KE162005.1                             I 8 C 0
s Myotis_davidii.KB100139.1                                1588748  9 -   6019432 TTAAATGG-C
i Myotis_davidii.KB100139.1                              I 8 C 0
s Myotis_lucifugus.GL429869.1                              3904845  9 -   4330536 TTAAATGG-C
i Myotis_lucifugus.GL429869.1                            I 8 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                         996  9 +      1835 TTAAATGG-C
i Myotis_myotis.MyoMyo_scaffold_281845                   I 8 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190264  8 +    196477 TTAAG-CT-G
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2035547  9 -   3037898 TAAGGGTA-A
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               16243  9 +     21681 CTAAACCT-G
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308545  9 +  31847680 ttaggcct-a
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5866725  9 +   7148211 tcaagcct-g
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    758890  9 +    783361 CTAAAACT-G
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150410  9 -   9404916 ttaggcct-a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102587199  9 - 196305487 CTAAGCCT-G
i Nycticebus_bengalensis.LG01                            C 0 I 3
s Nycticebus_coucang.k141_1127096                             1123  9 +      2075 CTAAGCCT-G
i Nycticebus_coucang.k141_1127096                        C 0 I 3
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105762554  9 + 199412804 CTAAGCCT-G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 3
s Odobenus_rosmarus.KB229312.1                              507690  9 -   2017862 ttaggtct-a
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          77541  9 -    150152 TCAAGCCT-G
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   26127  9 +     28053 TGAGGGTT-A
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    81164  9 +    102263 GAAGGGTT-A
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2782648  9 -  10937097 TCAAGCCT-G
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387              11149  9 -     18566 ttaagcct-a
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 I 1032
s Otocyon_megalotis.JAEUCK010005147.1                       463360  9 -    559221 ttaggcct-a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         5108  9 +      8798 CTAAGCCT-G
i Otolemur_crassicaudatus.k141_222918                    C 0 I 3
s Otolemur_garnettii.GL873799.1                             697270  9 -   1103335 CTAAGCCT-G
i Otolemur_garnettii.GL873799.1                          C 0 I 3
s Ovis_aries.CM001607.2                                   17586807  9 +  44047080 tcaagccc-a
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      174784  9 -    191736 tcaagccc-a
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    45196  9 +     80009 CTAAGCCT-G
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189144094  9 + 189151597 CTAAGCCT-G
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152174  7 +    230217 TAAAGTA---
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                265383  7 +  18783137 TAAAGTA---
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4722263  7 -   8748460 TAAAGTA---
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1265702  9 -   2937107 tcaagcct-g
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183444336  9 + 183742232 CTATGCCT-G
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7982  9 +     20448 CTACGCCT-G
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20564794  9 +  20919399 CTACGCCT-G
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6726  9 +     41871 CTACGCCT-G
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    10019  9 +     27711 CTACGCCT-G
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  1016  9 -     11374 CTACGCCT-G
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13669  7 -     78924 TAAAGTC---
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           11099  9 +     13100 CTAAGCCT-G
i Perodicticus_ibeanus.k141_855320                       C 0 I 3
s Perodicticus_potto.k141_1092580                             9493  9 +     25941 CTAAGCCT-G
i Perodicticus_potto.k141_1092580                        C 0 I 3
s Peromyscus_maniculatus.KI615324.1                       18195743  9 -  18517816 GAAGGGTT-A
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     29095  9 -     29689 TACAGCCT-G
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               9687  9 +     63832 tcaagcct-g
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1234363                           44735  9 +     62158 CTAAGCCT-G
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        39482  9 +     89929 CTAAGCCT-G
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40898  9 +     51399 CTAAGCCT-G
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14297137  9 -  14605196 CTAAGTCT-G
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2785  9 +     22620 TGAAATGG-C
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 8 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           35388  9 +     35617 TCAAGCCT-G
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 C 0
s Pongo_abelii.CM009266.2                                189156850 10 + 189387572 CTAAGCCCCG
i Pongo_abelii.CM009266.2                                I 24611 T 24612
s Pongo_pygmaeus.ctg66                                     9571846  9 +   9816681 CTAAGCCC-G
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               74418  9 -     81375 CTAAACCT-G
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              6239  9 +     19060 CTAAACCT-G
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 15702  9 -     22811 TTAAACAT-G
i Procavia_capensis.ProCapCap_scaffold_85530             I 1341 C 0
s Prolemur_simus.MPIZ01000396.1                            2597779  9 -   4620579 CTAAGCCT-G
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     991762  9 +   2598838 CTAAGCCT-G
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          30074  9 +     38485 CTAAGTCT-G
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              2116  9 -     13098 CTAAGCCT-G
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          27595  9 +     35766 CTAAGCCT-G
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           5782  9 -     24134 CTAAGCCT-G
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        29607  9 -     67325 ATAAGCCT-G
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           5830  9 -      6182 CTAAGCCT-G
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            11367  9 -     21651 TAAGGATT-T
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            16169  9 -     21811 TTAAAACT-G
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41542  7 +     42204 ttaggcc---
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22977796  9 +  28871421 ttaagcct-g
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN534172.1                                7849  9 -      8028 ttaagcct-g
i Pteropus_vampyrus.KN534172.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20275335  7 -  38429054 TAAAGTA---
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             16225  9 -     91421 CTAAACCT-G
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7610345  9 +   7812017 CTAAACCT-G
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             16224  9 -     72585 CTAAACCT-G
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6284  9 +     55207 TCAGGCCT-G
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53571583  9 +  90668790 TAAGGGTT-G
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        368012  9 -   3329780 ttaagcct-g
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                             7935  9 -     11128 CTAAACCT-G
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91237284  9 - 195417433 CTAAACCT-G
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672940  9 +   7961872 CTAAACCT-G
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88838  9 -     96226 ttcagcct-g
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saguinus_bicolor.k141_8081                                  2336  3 +     42994 TTA-------
i Saguinus_bicolor.k141_8081                             I 5 C 0
s Saguinus_imperator.k141_1496743                             1035  3 +      2253 TTA-------
i Saguinus_imperator.k141_1496743                        I 5 C 0
s Saguinus_inustus.k141_3945547                               1464  3 -      8737 TTA-------
i Saguinus_inustus.k141_3945547                          I 5 C 0
s Saguinus_labiatus.k141_4004060                              1117  3 +      2343 TTA-------
i Saguinus_labiatus.k141_4004060                         I 5 C 0
s Saguinus_midas.LG03                                    209475994  3 + 209938924 TTA-------
i Saguinus_midas.LG03                                    I 5 C 0
s Saguinus_mystax.k141_4699220                                 440  3 -      7576 TTA-------
i Saguinus_mystax.k141_4699220                           I 5 C 0
s Saimiri_boliviensis.NW_024100920.1                     119952063  9 - 121099817 TTAGGCCT-G
i Saimiri_boliviensis.NW_024100920.1                     I 5 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24405  9 +     46362 TTAGGCCT-G
i Saimiri_cassiquiarensis.k141_2188234                   I 5 C 0
s Saimiri_macrodon.k141_716185                               24500  9 +     45824 TTAGGCCT-G
i Saimiri_macrodon.k141_716185                           I 5 C 0
s Saimiri_oerstedii.k141_1487881                             41179  9 -     64574 TTAGGCCT-G
i Saimiri_oerstedii.k141_1487881                         I 5 C 0
s Saimiri_sciureus.k141_2278166                               4252  9 -     23631 TTAGGCCT-G
i Saimiri_sciureus.k141_2278166                          I 5 C 0
s Saimiri_ustus.k141_1484609                                 24396  9 -     61129 TTAGGCCT-G
i Saimiri_ustus.k141_1484609                             I 5 C 0
s Sapajus_apella.ctg103                                    5421744  9 -   5703754 TGAGGCCT-G
i Sapajus_apella.ctg103                                  I 5 C 0
s Sapajus_macrocephalus.k141_351809                          56985  9 -     80660 TGAGGCCT-G
i Sapajus_macrocephalus.k141_351809                      I 5 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154216  9 -    313613 GTAAATCT-G
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                         1116  9 -     12572 CTAAACCT-G
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27966  9 +     39453 CTAAACCT-G
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            8484  9 +     27826 CTAAACCT-G
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             8006  9 -     19483 CTAAACCT-G
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      1307  9 -     12762 CTAAACCT-G
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           1168  9 +     13763 CTAAACCT-G
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     1266  9 -     30804 TAAGGGCT-A
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               4775  9 +   1910179 GTAAGCCT-G
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13652016  9 -  18376816 GTAAATCT-G
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1955116  9 -   3870691 TAAAGTCT-G
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             32014  9 +     97271 TTAGGCAT-A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              19354  7 -    196729 TCAAGTC---
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.JH118708.1                                      37419  9 -     47482 TCAAGCCT-G
i Sus_scrofa.JH118708.1                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                11838  9 +     41958 TTAAACCT-G
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 6 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73629  8 +    116680 TTAAG-CT-G
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      119797  9 -    156842 ttaagcct-g
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    388267  9 +    539355 ttaagcct-g
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Theropithecus_gelada.CM009954.1                        186429654  9 + 186847797 CTAAGCCT-G
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106387  9 +    114563 TATATCCT-G
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   7372  5 +      8208 ----GCCT-G
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     82227  9 +    610378 ttaaattg-g
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         12057  9 -     20410 CTAAACCT-G
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      1171  9 -     12674 CTAAACCT-G
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       12158  9 +     19930 CTAAACCT-G
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       8569  9 -     19997 CTAAACCT-G
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48708  9 -     60166 CGAAACCT-G
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        16180  9 -     27529 CTAAACCT-G
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     16124  9 -     18194 CTAAACCT-G
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9836  9 -     21137 CTAAACCT-G
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    8539  9 -     10723 CTAAACCT-G
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7711  9 +      9834 CTAAACCT-G
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        26024  9 +     32220 CTAAACCT-G
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5940126  9 +   6242583 CTAAACCT-G
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        9377  9 +     20839 CGAAACCT-G
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                     641  8 +     27266 T-GAGCCT-G
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Trichechus_manatus.JH594705.1                            4294865  9 +  10818551 TTAAGCCT-A
i Trichechus_manatus.JH594705.1                          I 578 C 0
s Tupaia_chinensis.KB320699.1                              2156800  9 +   4065304 TGAGGCCG-G
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                    10246  9 -     10553 TGAAGCCG-G
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15738893  9 +  33153633 TCAAGCCT-G
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54314  9 -     77625 ttaagtct-g
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4851459  9 -   5085361 TTAGGCCT-A
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  12438  9 +     50397 CTAAGCCT-G
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             12497  9 +     24756 CTAAGCCT-G
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5372783  9 -   5488506 TGACGTCC-G
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 11808  9 -     43706 ttaggcct-a
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          2090  9 +    224448 TAAAGTCT-A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      15866  9 +     63895 TAAAGGTT-A
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_3601914            240  9 +       295 TCAAGCCT-G
i Ziphius_cavirostris.ZipCav_flattened_line_3601914      C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_484642                543 875 +      4343 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Tarsius_wallacei.k141_254427                                1877  3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080  3 +     70052 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                        67148670  0 + 174332312 C
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Ochotona_princeps.JH802162.1                             1365223  0 +   3988456 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             35221  4 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1851541  4 +   8254450 I
e Lepus_americanus.LepAme_scaffold_107385                     7769  0 -     14121 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Glis_glis.GliGli_scaffold_19807                            32063  0 +     49224 C
e Erinaceus_europaeus.JH835339.1                           3329265  0 -   7059049 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cephalopachus_bancanus.k141_1423433                         6085  3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Carlito_syrichta.NW_007259797.1                           156587  3 -    496798 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       7862 4 +     62944 T-C---CA
s Acomys_cahirinus.AcoCah_scaffold_12655                     71765 6 +     87051 T-CTT-TA
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 3
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511621 5 -  29979442 TTC---CG
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 3
s Ailurus_fulgens.LNAC01001112.1                             80680 5 -    347723 ttc---ca
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 3
s Allactaga_bullata.AllBul_scaffold_9566                     75477 6 -     89534 T-CTT-TA
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 3
s Allenopithecus_nigroviridis.k141_3361533                   15788 4 -     52922 T-C---CA
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15708 4 -     28001 T-C---CA
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          6206 4 -     18505 T-C---CA
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           7058 4 -     12518 T-C---CA
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              8631 4 +     51355 C-C---CA
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                1740 4 -     36483 C-C---CA
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              12192 4 +     28687 C-C---CA
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                  705 4 +     27940 C-C---CA
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            1749 4 -      9457 C-C---CA
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                              705 4 +     30492 C-C---CA
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              4700 4 +     47717 C-C---CA
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              1432 4 +      5663 C-C---CA
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             15884 4 +     50774 C-C---CA
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          676518 4 -   2318259 t-c---ca
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 3
s Anoura_caudifer.AnoCau_scaffold_1412                      186392 4 +    412891 t-t---ca
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 3
s Antilocapra_americana.AntAmePen_scaffold_12469             98999 4 -    100397 T-C---CA
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 I 3
s Aotus_azarae.k141_3104676                                  16872 4 -     33861 T-C---CA
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            16869 4 -     34016 T-C---TA
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299296 4 -   5030052 T-C---CA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             16905 4 -     34685 T-C---CA
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               30030 4 -     47192 T-C---CA
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13637 6 +     20879 T-GTT-TA
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 5
s Arctocebus_calabarensis.k141_2318572                       12302 4 +     14667 G-A---TG
i Arctocebus_calabarensis.k141_2318572                   I 3 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5774 4 +     43469 T-T---CA
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 3
s Avahi_laniger.k141_765380                                  54727 3 -     92717 G-C---C-
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              55358 3 +     85213 G-C---C-
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15192750 4 +  23207421 T-C---CA
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 3
s Balaenoptera_bonaerensis.DF707048.1                         3215 4 -     18090 T-C---CA
i Balaenoptera_bonaerensis.DF707048.1                    C 0 I 3
s Beatragus_hunteri.BeaHun_scaffold_50177                    27440 4 +     34529 T-C---CA
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 3
s Bison_bison.KN261452.1                                    200498 4 -    288883 t-c---ca
i Bison_bison.KN261452.1                                 C 0 I 3
s Bos_indicus.CM003028.1                                  18363402 4 - 116941312 T-C---CA
i Bos_indicus.CM003028.1                                 C 0 I 28
s Bos_mutus.JH880303.1                                     1126258 4 -   1948126 t-c---ca
i Bos_mutus.JH880303.1                                   C 0 I 3
s Bos_taurus.CM000184.6                                   18200376 4 - 114055384 T-C---CA
i Bos_taurus.CM000184.6                                  C 0 I 28
s Bubalus_bubalis.KI419123.1                               2820008 4 +   4408762 t-c---ca
i Bubalus_bubalis.KI419123.1                             C 0 I 3
s Callibella_humilis.k141_1278103                             6750 1 -     10423 -------A
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callimico_goeldii.k141_737284                                294 1 -     31217 -------A
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                              589 1 +      5377 -------A
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592450 1 - 189096842 -------A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1264 1 -     12329 -------A
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10003266 4 -  17673402 T-C---CA
i Camelus_bactrianus.KN276810.1                          C 0 I 3
s Camelus_dromedarius.KN272107.1                           2335742 4 -   7040546 T-C---CA
i Camelus_dromedarius.KN272107.1                         C 0 I 3
s Camelus_ferus.KB017975.1                                  404041 4 -   1652518 T-C---CA
i Camelus_ferus.KB017975.1                               C 0 I 3
s CanFam4.chr16                                           17800198 5 -  60362399 ttc---ta
i CanFam4.chr16                                          C 0 I 3
s Canis_lupus_VD.CanFam_VD_scaffold_27089                      946 5 -     43241 ttc---ta
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 I 3
s Canis_lupus_dingo.QKWQ01000480.1                         9035641 5 -   9314153 ttc---ta
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 3
s Canis_lupus_familiaris.chr16                            17960117 5 -  59632846 ttc---ta
i Canis_lupus_familiaris.chr16                           C 0 I 3
s Canis_lupus_orion.HG994398.1                            18501414 5 +  63665305 ttc---ta
i Canis_lupus_orion.HG994398.1                           C 0 I 3
s Capra_aegagrus.CM003241.1                               18830636 4 +  46296322 t-c---ca
i Capra_aegagrus.CM003241.1                              C 0 I 3
s Capra_hircus.CM004588.1                                 18061356 4 -  44709034 T-C---CA
i Capra_hircus.CM004588.1                                C 0 I 3
s Capromys_pilorides.CapPil_scaffold_65020                    2023 6 -     12242 A-CCT-AA
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 3
s Carollia_perspicillata.CarPer_scaffold_92756                6143 4 -     11696 T-T---CA
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 3
s Castor_canadensis.CasCan_scaffold_2074                    138322 6 +    179628 t-c-atca
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 2
s Catagonus_wagneri.CatWag_scaffold_2839                     94569 4 +    217609 T-C---CA
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 3
s Cebuella_niveiventris.k141_1251222                         11190 1 -     11392 -------A
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               7374 1 -      7577 -------A
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25653799 4 +  26074798 T-C---CA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                1737 4 +     28840 T-C---CA
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 1466 4 +     14051 T-C---CA
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Ceratotherium_simum.JH767749.1                          12232500 4 +  27778364 T-C---CA
i Ceratotherium_simum.JH767749.1                         C 0 I 3
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3527 4 -     25243 T-C---CA
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 I 3
s Cercocebus_atys.KQ010504.1                               4476725 4 +   4669795 T-C---CA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        1227 4 +     17872 T-C---CA
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           1816 4 -     14043 T-C---CA
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9917 4 +     27781 T-C---CA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        10085 4 -     20310 T-C---CA
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          13065 4 +     29689 T-C---CA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7811 4 -     20078 T-C---CA
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          15733 4 -     27936 T-C---CA
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            4599 4 -     17152 T-C---CA
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38818144 4 +  39242232 T-C---CA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223833 4 -  21565898 T-C---CA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40952 4 -     53127 T-C---CA
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        1203 4 +     13442 T-C---CA
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15752 4 -     27947 T-C---CA
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         15728 4 +     17596 T-C---CA
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          1771 4 +     14005 T-C---CA
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1490 4 -      8501 G-C---CA
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 I 3
s Cheirogaleus_major.k141_333249                             22105 3 -     52598 G-C---C-
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           17476 3 +     57038 G-C---C-
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1253900 6 +   2543920 T-CTT-TA
i Chinchilla_lanigera.JH722012.1                         C 0 I 3
s Chiropotes_albinasus.k141_2206961                           2071 4 -     15524 T-T---AA
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18429710 4 -  18827391 T-C---CA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       16146 4 -     50209 T-C---CA
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135423147 4 + 135778131 T-C---CA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_484642               1418 4 +      4343 t-c---ca
i Chrysochloris_asiatica.ChrAsi_scaffold_484642          I 875 I 36
s Colobus_angolensis.KN981557.1                            1911625 4 +   2368649 T-C---CA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949877 4 + 200372422 T-C---CA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              38159 4 +     84244 T-C---CA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549073 4 -  53390261 T-C---CT
i Condylura_cristata.JH655891.1                          C 0 I 3
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1505 4 +     23735 T-C---CA
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 I 3
s Cricetomys_gambianus.CriGam_scaffold_18520                 51044 6 +     63868 T-CTT-TA
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 3
s Cricetulus_griseus.LT883664.1                           11668532 6 + 224834208 T-CTT-TA
i Cricetulus_griseus.LT883664.1                          C 0 I 3
s Crocidura_indochinensis.CroInd_scaffold_37019               3963 4 -     19598 T-C---TA
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 I 3
s Ctenodactylus_gundi.CteGun_scaffold_65                    838091 6 +   1526836 T-CTT-TC
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 3
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  36888 7 +     51376 T-CTTCAA
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 3
s Dasypus_novemcinctus.JH564415.1                            64507 4 +   2246927 C-C---CA
i Dasypus_novemcinctus.JH564415.1                        C 0 I 3
s Daubentonia_madagascariensis.ctg71                      12538303 3 -  12879189 G-C---C-
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16812388 4 +  35494412 t-c---ca
i Delphinapterus_leucas.KZ290073.1                       C 0 I 3
s Desmodus_rotundus.KZ672289.1                             8631140 4 +  20541912 T-T---CA
i Desmodus_rotundus.KZ672289.1                           C 0 I 3
s Dicerorhinus_sumatrensis.PEKH010002091.1                  674348 4 +   1390856 t-c---ca
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 3
s Diceros_bicornis.DicBicMic_scaffold_5955                    7100 4 +    198055 T-C---CA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 3
s Dinomys_branickii.DinBra_scaffold_21862                    37375 6 +     67921 T-CCT-TA
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 3
s Echinops_telfairi.JH980293.1                            48781794 4 + 111700974 T-A---CA
i Echinops_telfairi.JH980293.1                           I 2 I 4
s Eidolon_helvum.KE759718.1                                  11571 4 +     11740 t-c---ca
i Eidolon_helvum.KE759718.1                              C 0 I 3
s Elaphurus_davidianus.JRFZ01104969.1                       311673 4 +    607251 T-C---CA
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 3
s Ellobius_lutescens.LOEQ01008920.1                          21502 6 -    110024 T-CTT-TA
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 3
s Ellobius_talpinus.LOJH01081419.1                            1408 6 +      8657 T-CTT-TA
i Ellobius_talpinus.LOJH01081419.1                       C 0 I 3
s Enhydra_lutris.KZ291758.1                               16330633 5 -  41312741 TTC---CA
i Enhydra_lutris.KZ291758.1                              C 0 I 3
s Eptesicus_fuscus.JH977646.1                              2146757 4 -  14770903 T-C---CA
i Eptesicus_fuscus.JH977646.1                            C 0 I 3
s Equus_asinus.JREZ01000139.1                              1284616 4 +   4378816 C-C---CA
i Equus_asinus.JREZ01000139.1                            C 0 I 3
s Equus_caballus.CM000403.2                               18532423 4 -  39960074 C-C---CA
i Equus_caballus.CM000403.2                              C 0 I 3
s Equus_przewalskii.KK951119.1                               34452 4 +    498745 C-C---CA
i Equus_przewalskii.KK951119.1                           C 0 I 3
s Erinaceus_europaeus.JH835339.1                           3329265 2 -   7059049 ------CA
i Erinaceus_europaeus.JH835339.1                         C 0 I 3
s Erythrocebus_patas.Contig38                             21206315 4 -  21539334 T-C---CA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12062 4 +    133382 t-c---ca
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 3
s Eubalaena_japonica.EubJap_flattened_line_31514             25999 4 -     44125 T-C---CA
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 I 3
s Eulemur_albifrons.k141_576796                              41155 3 -     44621 G-C---C-
i Eulemur_albifrons.k141_576796                          C 0 C 0
s Eulemur_collaris.k141_377015                                7536 3 -     16928 G-C---C-
i Eulemur_collaris.k141_377015                           C 0 C 0
s Eulemur_coronatus.k141_885031                              16568 3 -     25546 G-C---C-
i Eulemur_coronatus.k141_885031                          C 0 C 0
s Eulemur_flavifrons.k141_1184614                            13764 3 +     26330 G-C---C-
i Eulemur_flavifrons.k141_1184614                        C 0 C 0
s Eulemur_fulvus.k141_544389                                 14999 3 +     23973 G-C---C-
i Eulemur_fulvus.k141_544389                             C 0 C 0
s Eulemur_macaco.k141_1562045                                13761 3 +     75513 G-C---C-
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 11691 3 +     97555 G-C---C-
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_774594                             1183 3 +     13026 G-A---C-
i Eulemur_rubriventer.k141_774594                        C 0 C 0
s Eulemur_rufus.k141_1476633                                  5235 3 -     17153 G-C---C-
i Eulemur_rufus.k141_1476633                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              14808 3 +    111500 G-C---C-
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Fukomys_damarensis.KN121974.1                             851429 6 +   3816255 C-CAT-TA
i Fukomys_damarensis.KN121974.1                          C 0 I 3
s Galago_moholi.ctg2040                                     427605 4 -    453645 G-C---CA
i Galago_moholi.ctg2040                                  I 3 C 0
s Galago_senegalensis.k141_631886                             5295 4 +     11339 G-C---CA
i Galago_senegalensis.k141_631886                        I 3 C 0
s Galagoides_demidoff.k141_1711393                            2593 4 +     41679 G-C---CA
i Galagoides_demidoff.k141_1711393                       I 3 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               2213 4 -      9135 t-g---ca
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 I 3
s Giraffa_tippelskirchi.LVKQ01S007888.1                     609637 4 -    660261 T-C---CA
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 I 3
s Gorilla_beringei.k141_3596273                              17117 4 -     32273 T-C---CA
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186339252 4 + 186649187 T-C---CA
i Gorilla_gorilla.LT578341.1                             I 9 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33634 5 +     78134 T-CT--TA
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 2
s Hapalemur_alaotrensis.k141_170648                           7863 3 -     19426 G-C---C-
i Hapalemur_alaotrensis.k141_170648                      C 0 C 0
s Hapalemur_gilberti.k141_488810                             13016 3 -     15286 G-C---C-
i Hapalemur_gilberti.k141_488810                         C 0 C 0
s Hapalemur_griseus.k141_1511508                             14655 3 +     18253 G-C---C-
i Hapalemur_griseus.k141_1511508                         C 0 C 0
s Hapalemur_meridionalis.k141_248335                         14756 3 -     41752 G-C---C-
i Hapalemur_meridionalis.k141_248335                     C 0 C 0
s Hapalemur_occidentalis.k141_907772                         14593 3 -     16460 G-C---C-
i Hapalemur_occidentalis.k141_907772                     C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18841 4 +     36099 T-C---CA
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 I 3
s Heterocephalus_glaber.JH602082.1                        20663184 6 +  22651954 T-CAT-TA
i Heterocephalus_glaber.JH602082.1                       C 0 I 3
s Heterohyrax_brucei.HetBruBak_scaffold_122365                3258 4 +      7595 T-C---CA
i Heterohyrax_brucei.HetBruBak_scaffold_122365           C 0 I 4
s Hipposideros_armiger.JXIK01000431.1                       111534 4 +   1711038 T-C---CA
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 3
s Hipposideros_galeritus.HipGal_scaffold_29171               42965 4 +     43066 T-C---CA
i Hipposideros_galeritus.HipGal_scaffold_29171           C 0 I 3
s Hoolock_leuconedys.ctg274                                    435918 4 +    630532 T-C---CA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84080 6 +    135385 T-CTT-TG
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 3
s Ictidomys_tridecemlineatus.JH393364.1                    7521978 6 -   7955117 T-GTT-TA
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 2
s Indri_indri.k141_3655594                                   23550 3 +     31101 G-C---C-
i Indri_indri.k141_3655594                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               23603 4 +     23964 T-C---CA
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 I 3
s Jaculus_jaculus.JH725527.1                               8278139 6 -   9596543 T-CTT-TA
i Jaculus_jaculus.JH725527.1                             C 0 I 3
s Kogia_breviceps.KogBre_flattened_line_192630                2960 4 -      3359 T-C---CA
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 I 3
s Lasiurus_borealis.LasBor_scaffold_32767                    17415 4 -     42476 T-C---CA
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 24
s Lemur_catta.scaffold_24                                 15525108 3 -  30322482 G-C---C-
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        9029 1 +     64341 -------A
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           1369 1 -     35062 -------A
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        9056 1 +     35603 -------A
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    30669 1 +     38576 -------A
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         27373 1 +     66356 -------A
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepilemur_ankaranensis.k141_596936                         11997 3 -     23766 G-T---C-
i Lepilemur_ankaranensis.k141_596936                     C 0 C 0
s Lepilemur_dorsalis.k141_577674                             30051 3 +     45836 G-T---C-
i Lepilemur_dorsalis.k141_577674                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                          2596 3 +     25010 G-T---C-
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      27991 3 +     54090 G-T---C-
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3044094 5 +   3914936 ttc---tg
i Leptonychotes_weddellii.KB714746.1                     C 0 I 3
s Lipotes_vexillifer.KE559953.1                             268654 4 -    662738 t-c---ca
i Lipotes_vexillifer.KE559953.1                          C 0 I 3
s Lophocebus_aterrimus.ctg367                              1438268 4 +   1826925 T-C---CA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_399337                            15971 4 -     33856 G-C---CA
i Loris_lydekkerianus.k141_399337                        I 3 C 0
s Loris_tardigradus.ctg83                                  1013682 4 +   6120653 G-C---CA
i Loris_tardigradus.ctg83                                I 3 C 0
s Loxodonta_africana.GL010049.1                            4219586 4 -  43346337 T-C---CA
i Loxodonta_africana.GL010049.1                          C 0 I 4
s Lycaon_pictus.CM007581.1                                17956357 5 -  59628241 ttc---ta
i Lycaon_pictus.CM007581.1                               C 0 I 3
s Macaca_arctoides.k141_2326796                               8083 4 +     40492 T-C---CA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59677342 4 +  60120075 T-C---CA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13858 4 -     26193 T-C---CA
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            81642 4 -    114318 T-C---CA
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  7329 4 -     23192 T-C---CA
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16802 4 -     29190 T-C---CA
i Macaca_leonina.k141_3550399                            C 0 I 7
s Macaca_maura.k141_2733130                                  25367 4 +     37952 T-C---CA
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186840456 4 + 187317192 T-C---CA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25459019 4 -  25927173 T-C---CA
i Macaca_nemestrina.KQ007038.1                           C 0 I 7
s Macaca_nigra.k141_1655396                                  81215 4 +     89720 T-C---CA
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 8216 4 +     20474 T-C---CA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   8016 4 -     14993 T-C---CA
i Macaca_siberu.k141_635500                              C 0 I 7
s Macaca_silenus.Contig273                                  330882 4 -    668171 T-C---CA
i Macaca_silenus.Contig273                               C 0 I 7
s Macaca_thibetana.k99_256239                                 6329 4 -     24072 T-C---CA
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26954 4 -     45290 T-C---CA
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91664 4 +     94391 t-c---ca
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 3
s Mandrillus_leucophaeus.scaffold280                      23938545 4 -  24302211 T-C---CA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352667 4 +    752769 T-C---CA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              19289 4 +    737560 C-T---CA
i Manis_javanica.JSZB01003497.1                          C 0 I 3
s Manis_pentadactyla.KN006162.1                              51275 4 -    317179 C-T---CA
i Manis_pentadactyla.KN006162.1                          C 0 I 3
s Megaderma_lyra.MegLyr_scaffold_4542                        14375 4 -    207569 T-C---CG
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 3
s Mellivora_capensis.MelCap_flattened_line_69365             11344 5 +     13704 TTC---CG
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 8
s Meriones_unguiculatus.MerUng_scaffold_7390                 33730 6 +    140813 T-CTT-TA
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 3
s Mesocricetus_auratus.KB708134.1                         12183194 6 -  29670104 T-CTT-TA
i Mesocricetus_auratus.KB708134.1                        C 0 I 3
s Mesoplodon_bidens.MesBid_scaffold_108144                    4271 4 +     10310 T-C---CA
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 I 3
s Mico_argentatus.k141_1239457                                7186 1 -      7380 -------A
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_schneideri.k141_1950671                                      7159 1 -      7356 -------A
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           18292550 4 -  93316391 G-C--CC-
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    24507 4 -    145209 G-G---CA
i Microgale_talazaci.MicTal_scaffold_6613                I 2 I 4
s Micronycteris_hirsuta.MicHir_scaffold_52381                16893 4 -     19307 T-T---CA
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 213 I 3
s Microtus_ochrogaster.CM001695.1                         11261487 6 -  27267610 T-CTT-TA
i Microtus_ochrogaster.CM001695.1                        C 0 I 3
s Miopithecus_ogouensis.k141_534055                          10249 4 -     28506 T-C---CA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6961 5 -      8324 TTC---TG
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 3
s Mirza_zaza.k141_952172                                     10093 4 -     37649 G-C--CC-
i Mirza_zaza.k141_952172                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    27777 4 -    437263 t-c---ca
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 3
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142682 4 -    366855 T-T---CA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 3
s Moschus_moschiferus.MosMos_scaffold_13123                   1718 4 +     82753 t-c---ca
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 3
s Murina_feae.MurFea_scaffold_85699                           7860 4 +     14753 T-C---CA
i Murina_feae.MurFea_scaffold_85699                      C 0 I 3
s Mus_caroli.LT608237.1                                   84362346 6 - 120012414 G-CTT-CA
i Mus_caroli.LT608237.1                                  C 0 I 3
s Mus_musculus.chr8                                       87651339 6 - 129401213 G-CTT-CA
i Mus_musculus.chr8                                      C 0 I 3
s Mus_pahari.LT608297.1                                   31355993 6 -  89631738 G-CTT-CA
i Mus_pahari.LT608297.1                                  C 0 I 3
s Mus_spretus.CM004101.1                                  90753402 6 - 130317789 G-CTT-CA
i Mus_spretus.CM004101.1                                 C 0 I 3
s Mustela_putorius.JH418006.1                               302742 5 -  14710649 TTC---CG
i Mustela_putorius.JH418006.1                            C 0 I 3
s Myocastor_coypus.MyoCoy_scaffold_10123                     72205 6 -     80779 T-CCT-AA
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 I 3
s Myotis_brandtii.KE162005.1                                281502 4 -  10118263 T-C---CA
i Myotis_brandtii.KE162005.1                             C 0 I 3
s Myotis_davidii.KB100139.1                                1588757 4 -   6019432 T-C---CA
i Myotis_davidii.KB100139.1                              C 0 I 3
s Myotis_lucifugus.GL429869.1                              3904854 4 -   4330536 T-C---CA
i Myotis_lucifugus.GL429869.1                            C 0 I 3
s Myotis_myotis.MyoMyo_scaffold_281845                        1005 4 +      1835 T-C---CA
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 I 3
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190272 4 +    196477 G-C---CA
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 I 4
s Nannospalax_galili.KL204047.1                            2035556 6 -   3037898 C-CCT-AG
i Nannospalax_galili.KL204047.1                          C 0 I 3
s Nasalis_larvatus.k141_413338                               16252 4 +     21681 T-C---CA
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308554 5 +  31847680 ttc---tg
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 3
s Neophocaena_asiaeorientalis.KZ687982.1                   5866734 4 +   7148211 t-c---ca
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 3
s Noctilio_leporinus.NocLep_scaffold_251                    758899 4 +    783361 T-T---CA
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 3
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150419 5 -   9404916 ttc---ta
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 3
s Nycticebus_bengalensis.LG01                            102587211 4 - 196305487 G-C---TA
i Nycticebus_bengalensis.LG01                            I 3 C 0
s Nycticebus_coucang.k141_1127096                             1135 4 +      2075 G-C---TA
i Nycticebus_coucang.k141_1127096                        I 3 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105762566 4 + 199412804 G-C---TA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 3 C 0
s Odobenus_rosmarus.KB229312.1                              507699 5 -   2017862 ttc---tg
i Odobenus_rosmarus.KB229312.1                           C 0 I 3
s Okapia_johnstoni.LVCL01S0005463.1                          77550 4 -    150152 T-C---CA
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 3
s Ondatra_zibethicus.OndZib_scaffold_46174                   26136 6 +     28053 T-CTT-TA
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 3
s Onychomys_torridus.OnyTor_scaffold_2986                    81173 6 +    102263 C-TTT-TA
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 3
s Orcinus_orca.KB316932.1                                  2782657 4 -  10937097 T-C---CA
i Orcinus_orca.KB316932.1                                C 0 I 3
s Orycteropus_afer.OryAfe_flattened_line_144387              12190 4 -     18566 T-C---CA
i Orycteropus_afer.OryAfe_flattened_line_144387          I 1032 I 4
s Otocyon_megalotis.JAEUCK010005147.1                       463369 5 -    559221 ttc---ta
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 3
s Otolemur_crassicaudatus.k141_222918                         5120 4 +      8798 G-C---CA
i Otolemur_crassicaudatus.k141_222918                    I 3 C 0
s Otolemur_garnettii.GL873799.1                             697282 4 -   1103335 G-C---CA
i Otolemur_garnettii.GL873799.1                          I 3 C 0
s Ovis_aries.CM001607.2                                   17586816 4 +  44047080 t-c---ca
i Ovis_aries.CM001607.2                                  C 0 I 3
s Ovis_canadensis.OviCan_scaffold_2572                      174793 4 -    191736 t-c---ca
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 I 3
s Pan_paniscus.KQ411613.1                                    45205 4 +     80009 T-C---CA
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189144103 4 + 189151597 T-C---CA
i Pan_troglodytes.CM009242.2                             C 0 I 22
s Pantholops_hodgsonii.KE114653.1                          1265711 4 -   2937107 t-c---ca
i Pantholops_hodgsonii.KE114653.1                        C 0 I 3
s Papio_anubis.CM001495.2                                183444345 4 + 183742232 T-C---CA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7991 4 +     20448 T-C---CA
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20564803 4 +  20919399 T-C---CA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6735 4 +     41871 T-C---CA
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    10028 4 +     27711 T-C---CA
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  1025 4 -     11374 T-C---CA
i Papio_ursinus.k141_5274964                             C 0 C 0
s Perodicticus_ibeanus.k141_855320                           11111 4 +     13100 G-A---TG
i Perodicticus_ibeanus.k141_855320                       I 3 C 0
s Perodicticus_potto.k141_1092580                             9505 4 +     25941 G-A---TG
i Perodicticus_potto.k141_1092580                        I 3 C 0
s Peromyscus_maniculatus.KI615324.1                       18195752 6 -  18517816 G-CTT-TA
i Peromyscus_maniculatus.KI615324.1                      C 0 I 3
s Petromus_typicus.PetTyp_scaffold_42190                     29104 6 -     29689 T-CCT-TA
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 I 3
s Phocoena_phocoena.PhoPho_flattened_line_24159               9696 4 +     63832 t-c---ca
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 3
s Piliocolobus_badius.k141_1234363                           44744 4 +     62158 T-C---CA
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        39491 4 +     89929 T-C---CA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40907 4 +     51399 T-C---CA
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14297146 4 -  14605196 T-C---CA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2794 4 +     22620 T-C---CA
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 3
s Platanista_gangetica.PlaMin_flattened_line_32310           35397 4 +     35617 T-C---CA
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 I 3
s Pongo_abelii.CM009266.2                                189132248 4 + 189387572 T-C---TA
i Pongo_abelii.CM009266.2                                T 24612 C 0
s Pongo_pygmaeus.ctg66                                     9571855 4 +   9816681 T-C---TA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               74427 4 -     81375 T-C---CA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              6248 4 +     19060 T-C---CA
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 15711 4 -     22811 T-C---CA
i Procavia_capensis.ProCapCap_scaffold_85530             C 0 I 4
s Prolemur_simus.MPIZ01000396.1                            2597788 3 -   4620579 G-C---C-
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                     991771 3 +   2598838 G-G---C-
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_347390                          30083 3 +     38485 G-C---C-
i Propithecus_coronatus.k141_347390                      C 0 C 0
s Propithecus_diadema.k141_58108                              2125 3 -     13098 G-C---C-
i Propithecus_diadema.k141_58108                         C 0 C 0
s Propithecus_edwardsi.k141_1176054                          27604 3 +     35766 G-C---C-
i Propithecus_edwardsi.k141_1176054                      C 0 C 0
s Propithecus_perrieri.k141_1200571                           5791 3 -     24134 G-C---C-
i Propithecus_perrieri.k141_1200571                      C 0 C 0
s Propithecus_tattersalli.k141_790011                        29616 3 -     67325 G-C---C-
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_956661                           5839 3 -      6182 G-G---C-
i Propithecus_verreauxi.k141_956661                      C 0 C 0
s Psammomys_obesus.NESX01036370.1                            11376 6 -     21651 T-CTT-TA
i Psammomys_obesus.NESX01036370.1                        C 0 I 3
s Pteronotus_parnellii.KE909381.1                            16178 4 -     21811 C-T---CC
i Pteronotus_parnellii.KE909381.1                        C 0 I 2
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41549 5 +     42204 ttc---cg
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 3
s Pteropus_alecto.KB030862.1                              22977805 4 +  28871421 t-t---ca
i Pteropus_alecto.KB030862.1                             C 0 I 3
s Pteropus_vampyrus.KN534172.1                                7858 4 -      8028 t-t---ca
i Pteropus_vampyrus.KN534172.1                           C 0 I 3
s Pygathrix_cinerea.k141_1153803                             16234 4 -     91421 T-C---CA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7610354 4 +   7812017 T-C---CA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             16233 4 -     72585 T-C---CA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6293 4 +     55207 T-C---CA
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 3
s Rattus_norvegicus.chr16                                 53571592 6 +  90668790 T-CTT-CA
i Rattus_norvegicus.chr16                                C 0 I 3
s Rhinolophus_sinicus.LVEH01000134.1                        368021 4 -   3329780 t-c---ca
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 3
s Rhinopithecus_bieti.k119_217274                             7944 4 -     11128 T-C---CA
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91237293 4 - 195417433 T-C---CA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672949 4 +   7961872 T-C---CA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88847 4 -     96226 t-c---ca
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 3
s Saguinus_bicolor.k141_8081                                  2339 1 +     42994 -------A
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                             1038 1 +      2253 -------A
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               1467 1 -      8737 -------A
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                              1120 1 +      2343 -------A
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209475997 1 + 209938924 -------A
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                 443 1 -      7576 -------A
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119952072 4 - 121099817 T-C---CA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24414 4 +     46362 T-C---CA
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               24509 4 +     45824 T-C---CA
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             41188 4 -     64574 T-C---CA
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4261 4 -     23631 T-C---CA
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 24405 4 -     61129 T-C---CA
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5421753 4 -   5703754 T-C---CA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          56994 4 -     80660 T-C---CA
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154225 4 -    313613 T-C---CG
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 3
s Semnopithecus_entellus.k141_1672505                         1125 4 -     12572 T-C---CA
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27975 4 +     39453 T-C---CA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            8493 4 +     27826 T-C---CA
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             8015 4 -     19483 T-C---CA
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      1316 4 -     12762 T-C---CA
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           1177 4 +     13763 T-C---CA
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     1275 6 -     30804 T-GGT-CA
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 I 3
s Solenodon_paradoxus.SolPar_flattened_line_126               4784 4 +   1910179 T-C---CA
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 3
s Sorex_araneus.JH798187.1                                13652025 4 -  18376816 T-C---CA
i Sorex_araneus.JH798187.1                               C 0 I 3
s Spermophilus_dauricus.KZ294078.1                         1955125 6 -   3870691 T-GTT-TA
i Spermophilus_dauricus.KZ294078.1                       C 0 I 2
s Spilogale_gracilis.SpiGra_flattened_line_13525             32023 5 +     97271 TTC---CA
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 3
s Sus_scrofa.JH118708.1                                      37428 4 -     47482 T-C---CA
i Sus_scrofa.JH118708.1                                  C 0 I 3
s Tadarida_brasiliensis.TadBra_scaffold_25820                11847 4 +     41958 T-C---CA
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 3
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73637 4 +    116680 G-C---CA
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 I 4
s Tapirus_indicus.TapInd_scaffold_9301                      119806 4 -    156842 t-c---cA
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 3
s Tapirus_terrestris.TapTer_scaffold_755                    388276 4 +    539355 t-c---cA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 3
s Theropithecus_gelada.CM009954.1                        186429663 4 + 186847797 T-C---CA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106396 6 +    114563 T-CAT-TA
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 3
s Tolypeutes_matacus.TolMat_scaffold_228639                   7377 4 +      8208 G-C---AA
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 I 3
s Tonatia_saurophila.TonSau_scaffold_294                     82236 4 +    610378 t-t---ca
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 3
s Trachypithecus_auratus.k141_722599                         12066 4 -     20410 T-C---CA
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      1180 4 -     12674 T-C---CA
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       12167 4 +     19930 T-C---CA
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       8578 4 -     19997 T-C---CA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48717 4 -     60166 T-C---CA
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        16189 4 -     27529 T-C---CA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     16133 4 -     18194 T-C---CA
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9845 4 -     21137 T-C---CA
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    8548 4 -     10723 T-C---CA
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7720 4 +      9834 T-C---CA
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        26033 4 +     32220 T-C---CA
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5940135 4 +   6242583 T-C---CA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        9386 4 +     20839 T-C---CA
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                     649 4 +     27266 T-C---CA
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 I 3
s Trichechus_manatus.JH594705.1                            4294874 4 +  10818551 T-C---CA
i Trichechus_manatus.JH594705.1                          C 0 I 4
s Tupaia_chinensis.KB320699.1                              2156809 4 +   4065304 C-T---CA
i Tupaia_chinensis.KB320699.1                            C 0 I 3
s Tupaia_tana.TupTan_flattened_line_97126                    10255 4 -     10553 C-T---CA
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 3
s Tursiops_truncatus.MRVK01000835.1                       15738902 4 +  33153633 T-C---CA
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 3
s Uropsilus_gracilis.UroGra_scaffold_12083                   54323 4 -     77625 t-c---ca
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 3
s Ursus_maritimus.KK499267.1                               4851468 5 -   5085361 TTC---CA
i Ursus_maritimus.KK499267.1                             C 0 I 3
s Varecia_rubra.k141_590885                                  12447 3 +     50397 G-C---C-
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1128296                             12506 3 +     24756 G-C---C-
i Varecia_variegata.k141_1128296                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5372792 4 -   5488506 T-C---CA
i Vicugna_pacos.KN270157.1                               C 0 I 3
s Vulpes_lagopus.VulLag_flattened_line_30954                 11817 5 -     43706 ttc---ta
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 3
s Xerus_inauris.XerIna_scaffold_2302                          2099 6 +    224448 T-GTT-TA
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 2
s Zapus_hudsonius.ZapHud_scaffold_11398                      15875 6 +     63895 T-CTT-TA
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 3
s Ziphius_cavirostris.ZipCav_flattened_line_3601914            249 4 +       295 T-C---CA
i Ziphius_cavirostris.ZipCav_flattened_line_3601914      C 0 I 3
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Tarsius_wallacei.k141_254427                                1877 3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080 3 +     70052 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Suricata_suricatta.SurSur_flattened_line_6629              19361 0 -    196729 C
e Puma_concolor.QAVW01001104.1                            20275342 0 -  38429054 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13676 0 -     78924 C
e Panthera_tigris.KE722367.1                               4722270 0 -   8748460 C
e Panthera_pardus.KV860321.1                                265390 0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  152181 0 +    230217 C
e Oryctolagus_cuniculus.CM000791.1                        67148670 0 + 174332312 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Ochotona_princeps.JH802162.1                             1365223 0 +   3988456 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398 7 +     37127 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             35221 4 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1851541 4 +   8254450 I
e Marmota_marmota.CZRN01000018.1                          33104271 2 -  40650429 I
e Lepus_americanus.LepAme_scaffold_107385                     7769 0 -     14121 C
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  46059 0 +     55795 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Helogale_parvula.HelPar_flattened_line_2585               243356 0 +    327341 C
e Glis_glis.GliGli_scaffold_19807                            32063 0 +     49224 C
e Felis_nigripes.FelNig_flattened_line_20823                 10573 0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20196819 0 + 205367284 C
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             29517 0 -     87169 C
e Choloepus_hoffmanni.KN194906.1                            174401 3 +    839153 I
e Choloepus_didactylus.ChoDid_scaffold_45914                 19327 3 +     19366 I
e Cephalopachus_bancanus.k141_1423433                         6085 3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Carlito_syrichta.NW_007259797.1                           156587 3 -    496798 I
e Acinonyx_jubatus.LLWD01001279.1                           828334 0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       7866 22 +     62944 GCCC---CA---AG-CT--------CAA-A--GCA--C--T--------CT--C
s Acinonyx_jubatus.LLWD01001279.1                           828334 25 -   1699592 TCCA---CA---GCCCT--------CAG-T--GTA--C--T--CT-C---T--C
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     71774 20 +     87051 TCCA---TG---GTTCT--------CAT-A--GGA--T--G-------------
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 3 I 2
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511629 15 -  29979442 TCCA---CA---GTCCT--------CAG-T------------------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 3 I 2
s Ailurus_fulgens.LNAC01001112.1                             80688 33 -    347723 tcca---ca---gttctcagttcctcag-t--gta--c--t-----ctc-t--c
i Ailurus_fulgens.LNAC01001112.1                         I 3 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     75486 20 -     89534 TCTA---CA---ATCTT--------CAC-A--GTA--C--T-------------
i Allactaga_bullata.AllBul_scaffold_9566                 I 3 I 2
s Allenopithecus_nigroviridis.k141_3361533                   15792 22 -     52922 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15712 22 -     28001 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          6210 22 -     18505 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           7062 22 -     12518 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              8635 24 +     51355 GCCC---CA---TA-CT--------CAA-A--GTGCTC--T--------CT--C
i Alouatta_belzebul.k141_3560514                         C 0 I 2
s Alouatta_caraya.k141_1701091                                1744 24 -     36483 GCCC---CA---TA-CT--------CAA-A--GTGCTC--T--------CT--C
i Alouatta_caraya.k141_1701091                           C 0 I 2
s Alouatta_discolor.k141_566626                              12196 24 +     28687 GCCC---CA---TA-CT--------CAA-A--GTACTC--T--------CT--C
i Alouatta_discolor.k141_566626                          C 0 I 2
s Alouatta_juara.k141_1302312                                  709 24 +     27940 GCCC---CA---TA-CT--------CAA-A--GTGCTC--T--------CT--C
i Alouatta_juara.k141_1302312                            C 0 I 2
s Alouatta_macconnelli.k141_918386                            1753 24 -      9457 GCCC---CA---TA-CT--------CAA-A--GTGCTC--T--------CT--C
i Alouatta_macconnelli.k141_918386                       C 0 I 2
s Alouatta_nigerrima.k141_1929159                              709 24 +     30492 GCCC---CA---TA-CT--------CAA-A--GTGCTC--T--------CT--C
i Alouatta_nigerrima.k141_1929159                        C 0 I 2
s Alouatta_palliata.k141_2135620                              4704 24 +     47717 GCCC---CA---TA-CT--------CAA-A--GTGCTC--T--------CT--C
i Alouatta_palliata.k141_2135620                         C 0 I 2
s Alouatta_puruensis.k141_362188                              1436 24 +      5663 GCCC---CA---TA-CT--------CAA-A--GTGCTC--T--------CT--C
i Alouatta_puruensis.k141_362188                         C 0 I 2
s Alouatta_seniculus.k141_117119                             15888 24 +     50774 GCCC---CA---TA-CT--------CAA-A--GTGCTC--T--------CT--C
i Alouatta_seniculus.k141_117119                         C 0 I 2
s Ammotragus_lervia.NIVO01071767.1                          676525 25 -   2318259 tcca---ta---gtcct--------cac-t--gtt--c--g-----gtc-t--c
i Ammotragus_lervia.NIVO01071767.1                       I 3 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      186399 23 +    412891 tcca---ca---gccct--------cag-t--gta--c--t-------g-c--c
i Anoura_caudifer.AnoCau_scaffold_1412                   I 3 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             99006 25 -    100397 TTCA---TA---GTCCT--------CAC-T--GTT--C--T--GT-C---T--C
i Antilocapra_americana.AntAmePen_scaffold_12469         I 3 C 0
s Aotus_azarae.k141_3104676                                  16876 22 -     33861 GCCC---CA---CA-TT--------CAA-A--GCA--C--T--------CT--C
i Aotus_azarae.k141_3104676                              C 0 I 2
s Aotus_griseimembra.k141_2240599                            16873 22 -     34016 GCCC---CA---CA-TT--------CAA-A--GCA--C--T--------CT--C
i Aotus_griseimembra.k141_2240599                        C 0 I 2
s Aotus_nancymaae.KZ198451.1                               4299300 22 -   5030052 GCCC---CA---CA-TT--------CAA-A--GCA--C--T--------CT--C
i Aotus_nancymaae.KZ198451.1                             C 0 I 2
s Aotus_trivirgatus.k141_2152450                             16909 22 -     34685 GCCC---CA---CA-TT--------CAA-A--GCA--C--T--------CT--C
i Aotus_trivirgatus.k141_2152450                         C 0 I 2
s Aotus_vociferans.k141_344750                               30034 22 -     47192 GCCC---CA---CA-TT--------CAA-A--GCA--C--T--------CT--C
i Aotus_vociferans.k141_344750                           C 0 I 2
s Aplodontia_rufa.AprRuf_scaffold_68852                      13648 16 +     20879 --TA---CA---ATCCT--------TAA-G--GTA-------------------
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 5 C 0
s Arctocebus_calabarensis.k141_2318572                       12306 23 +     14667 TCCA---CA---TGCCT--------CAA-G--TTT--C--T--C------T--C
i Arctocebus_calabarensis.k141_2318572                   C 0 I 2
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5781 23 +     43469 TCCA---CA---GCCCT--------CAA-T--GTA--C--T--C------G--C
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 3 C 0
s Avahi_laniger.k141_765380                                  54730 23 -     92717 CTCA---CA---CGCCT--------CAA-G--GTG--T--T--C------T--G
i Avahi_laniger.k141_765380                              C 0 I 2
s Avahi_peyrierasi.k141_1424874                              55361 23 +     85213 CTCA---CA---CGCCT--------CAA-G--GTG--T--T--C------T--G
i Avahi_peyrierasi.k141_1424874                          C 0 I 2
s Balaenoptera_acutorostrata.KI537508.1                   15192757 25 +  23207421 TCCA---CT---GTCCT--------CAC-T--GTT--CTGT--C------T--C
i Balaenoptera_acutorostrata.KI537508.1                  I 3 C 0
s Balaenoptera_bonaerensis.DF707048.1                         3222 25 -     18090 TCCA---CT---GTCCT--------CAC-T--GTT--CTGT--C------T--C
i Balaenoptera_bonaerensis.DF707048.1                    I 3 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    27447 25 +     34529 TCCA---TA---GTCCT--------CAC-T--GTT--C--TGGC------T--C
i Beatragus_hunteri.BeaHun_scaffold_50177                I 3 C 0
s Bison_bison.KN261452.1                                    200505 25 -    288883 tcca---ta---gtcct--------cac-t--gtt--c--t-----gtc-t--c
i Bison_bison.KN261452.1                                 I 3 C 0
s Bos_indicus.CM003047.1                                  20273709 25 +  48749331 tcca---ta---gtcct--------cac-t--gtt--c--t-----gtc-t--c
i Bos_indicus.CM003047.1                                 I 16 I 11
s Bos_mutus.JH880303.1                                     1126265 25 -   1948126 tcca---ta---gtcct--------cac-t--gtt--c--t-----gtc-t--c
i Bos_mutus.JH880303.1                                   I 3 C 0
s Bos_taurus.CM000203.6                                   18084347 25 +  45695690 tcca---ta---gtcct--------cac-t--gtt--c--t-----gtc-t--c
i Bos_taurus.CM000203.6                                  I 16 I 11
s Bubalus_bubalis.KI419123.1                               2820015 25 +   4408762 tcca---ta---gtcct--------cac-t--gtt--c--t-----gtc-t--c
i Bubalus_bubalis.KI419123.1                             I 3 C 0
s Callibella_humilis.k141_1278103                             6751 22 -     10423 GCCC---CA---TG-CT--------CAA-A--GCA--C--T--------CT--C
i Callibella_humilis.k141_1278103                        C 0 I 4
s Callimico_goeldii.k141_737284                                295 22 -     31217 GCCC---CA---TA-CT--------CAA-A--GCA--C--T--------CT--T
i Callimico_goeldii.k141_737284                          C 0 I 4
s Callithrix_geoffroyi.k119_69176                              590 22 +      5377 GCCC---CA---TG-CT--------CAA-A--GCA--C--T--------CT--C
i Callithrix_geoffroyi.k119_69176                        C 0 I 4
s Callithrix_jacchus.pat_scaffold_3                       23592451 22 - 189096842 GCCC---CA---TG-CT--------CAA-A--GCA--C--T--------CT--C
i Callithrix_jacchus.pat_scaffold_3                      C 0 I 4
s Callithrix_kuhlii.k119_1168854                              1265 22 -     12329 GCCC---CA---TG-CT--------CAA-A--GCA--C--T--------CT--C
i Callithrix_kuhlii.k119_1168854                         C 0 I 4
s Camelus_bactrianus.KN276810.1                           10003273 25 -  17673402 CCCA---CC---ATCCT--------CAC-T--GTT--C--C--C------TCTC
i Camelus_bactrianus.KN276810.1                          I 3 C 0
s Camelus_dromedarius.KN272107.1                           2335749 25 -   7040546 CCCA---CC---ATCCT--------CAT-T--GTT--C--C--C------TCTC
i Camelus_dromedarius.KN272107.1                         I 3 C 0
s Camelus_ferus.KB017975.1                                  404048 25 -   1652518 CCCA---CC---ATCCT--------CAT-T--GTT--C--C--C------TCTC
i Camelus_ferus.KB017975.1                               I 3 C 0
s CanFam4.chr16                                           17800206 25 -  60362399 tcca---cg---gccct--------gag-t--gaa--c--c-----ctc-t--c
i CanFam4.chr16                                          I 3 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                      954 25 -     43241 tcca---cg---gccct--------gag-t--gaa--c--c-----ctc-t--c
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 3 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9035649 25 -   9314153 tcca---cg---gccct--------gag-t--gaa--c--c-----ctc-t--c
i Canis_lupus_dingo.QKWQ01000480.1                       I 3 C 0
s Canis_lupus_familiaris.chr16                            17960125 25 -  59632846 tcca---cg---gccct--------gag-t--gaa--c--c-----ctc-t--c
i Canis_lupus_familiaris.chr16                           I 3 C 0
s Canis_lupus_orion.HG994398.1                            18501422 25 +  63665305 tcca---cg---gccct--------gag-t--gaa--c--c-----ctc-t--c
i Canis_lupus_orion.HG994398.1                           I 3 C 0
s Capra_aegagrus.CM003241.1                               18830643 25 +  46296322 tcca---ta---gtcct--------cac-t--gtt--c--g-----gtc-t--c
i Capra_aegagrus.CM003241.1                              I 3 C 0
s Capra_hircus.CM004588.1                                 18061363 25 -  44709034 TCCA---TA---GTCCT--------CAC-T--GTT--C--G--GT-C---T--C
i Capra_hircus.CM004588.1                                I 3 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    2032 22 -     12242 TCTA---CC---ATCCT--------C-AAG--GCACTG--G-------------
i Capromys_pilorides.CapPil_scaffold_65020               I 3 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6150 23 -     11696 TCCA---CA---GCCCT--------CAA-T--GTA--C--T--C------C--C
i Carollia_perspicillata.CarPer_scaffold_92756           I 3 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138330 11 +    179628 ---------------ct--------caa-g--gta--c--t-------------
i Castor_canadensis.CasCan_scaffold_2074                 I 2 I 5
s Catagonus_wagneri.CatWag_scaffold_2839                     94576 25 +    217609 TCCA---GC---GTCCT--------TAT-C--GCT--C--T--CT-C---T--C
i Catagonus_wagneri.CatWag_scaffold_2839                 I 3 C 0
s Cebuella_niveiventris.k141_1251222                         11191 22 -     11392 GCCC---CA---TG-CT--------CAA-A--GCA--C--T--------CT--C
i Cebuella_niveiventris.k141_1251222                     C 0 I 4
s Cebuella_pygmaea.k141_1309012                               7375 22 -      7577 GCCC---CA---TG-CT--------CAA-A--GCA--C--T--------CG--C
i Cebuella_pygmaea.k141_1309012                          C 0 I 4
s Cebus_albifrons.Contig27                                25653803 22 +  26074798 GGCC---CA---TG-AT--------CAA-A--GCA--C--T--------CT--C
i Cebus_albifrons.Contig27                               C 0 I 2
s Cebus_olivaceus.k141_1764483                                1741 22 +     28840 GGCC---CA---TG-AT--------CAA-A--GCA--C--T--------CT--C
i Cebus_olivaceus.k141_1764483                           C 0 I 2
s Cebus_unicolor.k141_1837183                                 1470 22 +     14051 GGCC---CA---TG-AT--------CAA-A--GCA--C--T--------CT--C
i Cebus_unicolor.k141_1837183                            C 0 I 2
s Ceratotherium_simum.JH767749.1                          12232507  8 +  27778364 TCCA---ca---gt----------------------------------------
i Ceratotherium_simum.JH767749.1                         I 3 I 19
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3534  8 -     25243 tcca---ca---gt----------------------------------------
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 3 I 19
s Cercocebus_atys.KQ010504.1                               4476729 22 +   4669795 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        1231 22 +     17872 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           1820 22 -     14043 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9921 22 +     27781 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        10089 22 -     20310 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          13069 22 +     29689 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7815 22 -     20078 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          15737 22 -     27936 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            4603 22 -     17152 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38818148 22 +  39242232 GCCC---CA---CA-CT--------CAA-A--GCA--C--C--------CT--C
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223837 22 -  21565898 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40956 22 -     53127 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------TT--C
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        1207 22 +     13442 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15756 22 -     27947 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         15732 22 +     17596 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          1775 22 +     14005 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1497 20 -      8501 GCCA---CC---ATCCT--------CAC-C--AGA--C--A-------------
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       I 3 I 1
s Cheirogaleus_major.k141_333249                             22108 23 -     52598 CCCA---CA---CGCCT--------CAA-G--GTG--T--T--C------T--C
i Cheirogaleus_major.k141_333249                         C 0 I 2
s Cheirogaleus_medius.k141_1055463                           17479 23 +     57038 CCCA---CA---TGCCT--------CAA-G--GTG--T--T--C------T--C
i Cheirogaleus_medius.k141_1055463                       C 0 I 2
s Chinchilla_lanigera.JH722012.1                           1253909 22 +   2543920 TCTG---CC---ATCCT--------C-GAG--GTACTG--G-------------
i Chinchilla_lanigera.JH722012.1                         I 3 C 0
s Chiropotes_albinasus.k141_2206961                           2075 24 -     15524 GTCC---CA---TG-CT--------CAA-A--GCA--C--T--------CTCCC
i Chiropotes_albinasus.k141_2206961                      C 0 I 2
s Chlorocebus_aethiops.ctg25                              18429714 22 -  18827391 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       16150 22 -     50209 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135423151 22 + 135778131 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_45914                 19330  8 +     19366 GCCT---CA---GT----------------------------------------
i Choloepus_didactylus.ChoDid_scaffold_45914             I 3 N 0
s Choloepus_hoffmanni.KN194906.1                            174404  8 +    839153 GCCT---CA---GT----------------------------------------
i Choloepus_hoffmanni.KN194906.1                         I 3 I 1771
s Chrysochloris_asiatica.ChrAsi_scaffold_484642               1458 18 +      4343 tttc---tg---acttc--------cat-t--ggc-------------------
i Chrysochloris_asiatica.ChrAsi_scaffold_484642          I 36 I 16
s Colobus_angolensis.KN981557.1                            1911629 22 +   2368649 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949881 22 + 200372422 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              38163 22 +     84244 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549080 23 -  53390261 TCCA---CA---GCCCT--------CCA-T--TTG--T--T--C------T--G
i Condylura_cristata.JH655891.1                          I 3 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1512 23 +     23735 TCCA---CA---GTCTT--------CAA-T--GTG--T--TT--------T--C
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      I 3 I 2
s Cricetomys_gambianus.CriGam_scaffold_18520                 51053 20 +     63868 TTCA---CA---GTCCT--------CAT-G--GGT--T--G-------------
i Cricetomys_gambianus.CriGam_scaffold_18520             I 3 I 2
s Cricetulus_griseus.LT883664.1                           11668541  7 + 224834208 TCCA---CA---G-----------------------------------------
i Cricetulus_griseus.LT883664.1                          I 3 I 6
s Crocidura_indochinensis.CroInd_scaffold_37019               3970 22 -     19598 TCC----AA---ATCCT--------CTG-T--GTA--C--T--C------T--T
i Crocidura_indochinensis.CroInd_scaffold_37019          I 3 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29517 25 -     87169 TCCA---CA---GTCCT--------CAG-G--GCA--C--T--CT-C---T--T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    838100 20 +   1526836 TCTT---CG---GTCCT--------TAA-G--GTA--A--G-------------
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 3 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  36898 22 +     51376 TCTG---CC---ATCCT--------C-AAG--GCACTG--G-------------
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 3 C 0
s Dasypus_novemcinctus.JH564415.1                            64514 20 +   2246927 GCCA---CC---GTCCT--------CAC-T--GGA--C--A-------------
i Dasypus_novemcinctus.JH564415.1                        I 3 I 1
s Daubentonia_madagascariensis.ctg71                      12538306 23 -  12879189 TCCA---CA---TGCCT--------CAA-G--GTG--C--T--C------T--C
i Daubentonia_madagascariensis.ctg71                     C 0 I 2
s Delphinapterus_leucas.KZ290073.1                        16812395 25 +  35494412 tcca---ct---gtcct--------cac-t--gtt--ctgt-------c-t--c
i Delphinapterus_leucas.KZ290073.1                       I 3 C 0
s Desmodus_rotundus.KZ672289.1                             8631147 23 +  20541912 TCCA---CA---GCCCT--------CAA-T--GTA--C--T-------G-C--C
i Desmodus_rotundus.KZ672289.1                           I 3 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  674355  8 +   1390856 tcca---ca---gt----------------------------------------
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 3 I 19
s Diceros_bicornis.DicBicMic_scaffold_5955                    7107  8 +    198055 tcca---ca---gt----------------------------------------
i Diceros_bicornis.DicBicMic_scaffold_5955               I 3 I 19
s Dinomys_branickii.DinBra_scaffold_21862                    37384 22 +     67921 TCTG---CC---ATCCT--------C-AAG--GTCCTG--G-------------
i Dinomys_branickii.DinBra_scaffold_21862                I 3 C 0
s Echinops_telfairi.JH980293.1                            48781802 17 + 111700974 GTT----CA---GCTGT--------CAT-T--GTA-------------------
i Echinops_telfairi.JH980293.1                           I 4 I 7
s Eidolon_helvum.KE759718.1                                  11578 23 +     11740 tcca---ca---gtcct--------taa-t--gca--c--t-------c-t--c
i Eidolon_helvum.KE759718.1                              I 3 I 2
s Elaphurus_davidianus.JRFZ01104969.1                       311680 25 +    607251 TCCA---AA---GTCCT--------CAC-T--GTT--C--C-A-T-C---T--C
i Elaphurus_davidianus.JRFZ01104969.1                    I 3 C 0
s Ellobius_lutescens.LOEQ01008920.1                          21511 20 -    110024 TCCA---CA---GTGCG--------CAT-A--GGA--T--G-------------
i Ellobius_lutescens.LOEQ01008920.1                      I 3 I 2
s Ellobius_talpinus.LOJH01081419.1                            1417 20 +      8657 TCCA---CA---GTGCT--------CAT-G--GGT--T--G-------------
i Ellobius_talpinus.LOJH01081419.1                       I 3 I 2
s Enhydra_lutris.KZ291758.1                               16330641 33 -  41312741 TCCA---CA---GTCCTCAGTTCCTCAG-T--GTA--C--T--CT-C---T--C
i Enhydra_lutris.KZ291758.1                              I 3 C 0
s Eptesicus_fuscus.JH977646.1                              2146764 23 -  14770903 TCCA---CA---GTCTT--------CAG-T--GCA--C--T--C------C--C
i Eptesicus_fuscus.JH977646.1                            I 3 C 0
s Equus_asinus.JREZ01000139.1                              1284623  8 +   4378816 TCCA---CA---GT----------------------------------------
i Equus_asinus.JREZ01000139.1                            I 3 I 19
s Equus_caballus.CM000403.2                               18532430  8 -  39960074 TCCA---CA---GT----------------------------------------
i Equus_caballus.CM000403.2                              I 3 I 19
s Equus_przewalskii.KK951119.1                               34459  8 +    498745 TCCA---CA---GT----------------------------------------
i Equus_przewalskii.KK951119.1                           I 3 I 19
s Erinaceus_europaeus.JH835339.1                           3329270 22 -   7059049 TCCA---TA---GTTCT--------CAA-A--GAA--T--T--C------A---
i Erinaceus_europaeus.JH835339.1                         I 3 C 0
s Erythrocebus_patas.Contig38                             21206319 22 -  21539334 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12069 25 +    133382 tcca---ct---gtcct--------cac-t--gtt--ctgt-------c-t--c
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 3 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             26006 25 -     44125 TCCA---CT---GTCCT--------CAC-T--GTT--CTGT--C------T--C
i Eubalaena_japonica.EubJap_flattened_line_31514         I 3 C 0
s Eulemur_albifrons.k141_576796                              41158 23 -     44621 CCCA---CT---CGCCT--------CAA-G--GTG--C--T--C------T--C
i Eulemur_albifrons.k141_576796                          C 0 I 2
s Eulemur_collaris.k141_377015                                7539 23 -     16928 CCCA---CT---CGCCT--------CAA-G--GTG--C--T--C------T--C
i Eulemur_collaris.k141_377015                           C 0 I 2
s Eulemur_coronatus.k141_885031                              16571 23 -     25546 CCCA---CC---CGCCT--------CAA-G--GTG--C--T--C------T--C
i Eulemur_coronatus.k141_885031                          C 0 I 2
s Eulemur_flavifrons.k141_1184614                            13767 23 +     26330 CCCA---CC---CGCCT--------CAA-G--GTG--C--T--C------T--C
i Eulemur_flavifrons.k141_1184614                        C 0 I 2
s Eulemur_fulvus.k141_544389                                 15002 23 +     23973 CCCA---TT---CGCCT--------CAA-G--GTG--C--T--C------T--C
i Eulemur_fulvus.k141_544389                             C 0 I 2
s Eulemur_macaco.k141_1562045                                13764 23 +     75513 CCCA---CC---CGCCT--------CAA-G--GTG--C--T--C------T--C
i Eulemur_macaco.k141_1562045                            C 0 I 2
s Eulemur_mongoz.k141_232305                                 11694 23 +     97555 CCCA---CC---TGCCT--------CAA-G--GTG--A--T--C------T--C
i Eulemur_mongoz.k141_232305                             C 0 I 2
s Eulemur_rubriventer.k141_774594                             1186 23 +     13026 CCCA---CC---CGCAT--------CAA-G--GTG--T--T--C------T--C
i Eulemur_rubriventer.k141_774594                        C 0 I 2
s Eulemur_rufus.k141_1476633                                  5238 23 -     17153 CCCA---CC---CGCCT--------CAA-G--GTG--C--T--C------T--C
i Eulemur_rufus.k141_1476633                             C 0 I 2
s Eulemur_sanfordi.k141_1122526                              14811 23 +    111500 CCCA---CC---CACCT--------CAA-G--GTG--C--T--C------T--C
i Eulemur_sanfordi.k141_1122526                          C 0 I 2
s Felis_catus.CM001381.2                                  20237976 25 + 206538554 TCCA---TA---GCCCT--------CAG-T--GTA--C--T--CT-C---T--C
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20196819 25 + 205367284 TCCA---TA---GCCCT--------CAG-T--GTA--C--T--CT-C---T--C
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 10573 25 -     36744 TCCA---CA---GCCCT--------CAG-T--GTA--C--T--CT-C---T--C
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             851438 20 +   3816255 --TG---TC---ATCTT--------C-CAG--GTACTG--G-------------
i Fukomys_damarensis.KN121974.1                          I 3 C 0
s Galago_moholi.ctg2040                                     427609 23 -    453645 TCCA---CA---TGCCT--------CAA-G--GTT--C--T--C------T--C
i Galago_moholi.ctg2040                                  C 0 I 2
s Galago_senegalensis.k141_631886                             5299 23 +     11339 TCCA---CA---TGCCT--------CAA-G--GTT--C--T--C------T--C
i Galago_senegalensis.k141_631886                        C 0 I 2
s Galagoides_demidoff.k141_1711393                            2597 23 +     41679 TGCA---CA---TGCCT--------CAA-G--GTT--C--T--C------T--C
i Galagoides_demidoff.k141_1711393                       C 0 I 2
s Galeopterus_variegatus.GalVar_scaffold_108840               2220 23 -      9135 tcca---ca---gtccc--------caa-t--gca--c--t-------c-t--c
i Galeopterus_variegatus.GalVar_scaffold_108840          I 3 I 2
s Giraffa_tippelskirchi.LVKQ01S007888.1                     609644 25 -    660261 TCCA---TA---GTCCT--------CAC-T--GTT--C--T--GT-C---T--C
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 3 C 0
s Gorilla_beringei.k141_3596273                              17121 22 -     32273 GCCC---CA---AG-CT--------CAA-A--GCA--C--T--------CT--C
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186339256 22 + 186649187 GCCC---CA---AG-CT--------CAA-A--GCA--C--T--------CT--C
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33641 19 +     78134 --TTCTACA---GTCCT--------CAA-C--CTA-------------------
i Graphiurus_murinus.GraMur_scaffold_10447               I 2 C 0
s Hapalemur_alaotrensis.k141_170648                           7866 23 -     19426 CCCA---CC---CGCCT--------CAA-G--GTG--C--T--C------T--C
i Hapalemur_alaotrensis.k141_170648                      C 0 I 2
s Hapalemur_gilberti.k141_488810                             13019 23 -     15286 CCCA---CC---TGCCT--------CAA-G--GTG--C--T--C------T--C
i Hapalemur_gilberti.k141_488810                         C 0 I 2
s Hapalemur_griseus.k141_1511508                             14658 23 +     18253 CCCA---CC---TGCCT--------CAA-G--GTG--C--T--C------T--C
i Hapalemur_griseus.k141_1511508                         C 0 I 2
s Hapalemur_meridionalis.k141_248335                         14759 23 -     41752 CCCA---CC---CGCCT--------CAA-G--GTG--C--T--C------T--C
i Hapalemur_meridionalis.k141_248335                     C 0 I 2
s Hapalemur_occidentalis.k141_907772                         14596 23 -     16460 CCCA---CC---CGCCT--------CAA-G--GTG--C--T--C------T--C
i Hapalemur_occidentalis.k141_907772                     C 0 I 2
s Helogale_parvula.HelPar_flattened_line_2585               243356 25 +    327341 TCCA---CA---GTGCT--------CAG-T--GCA--C--T--CT-C---T--T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18848 25 +     36099 TCCA---TA---GTCCT--------CAC-T--GTT--C--G--GT-C---T--C
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 3 C 0
s Heterocephalus_glaber.JH602082.1                        20663193 22 +  22651954 TCTG---TA---ATCCT--------C-AAA--GTACTG--G-------------
i Heterocephalus_glaber.JH602082.1                       I 3 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                3266 19 +      7595 GCTA---CA---GCTCT--------CAA-A--ACA--C----------------
i Heterohyrax_brucei.HetBruBak_scaffold_122365           I 4 I 8
s Hipposideros_armiger.JXIK01000431.1                       111541 23 +   1711038 TCCA---CA---GTCCT--------CAA-T--GTG--C--T--C------T--C
i Hipposideros_armiger.JXIK01000431.1                    I 3 I 4
s Hipposideros_galeritus.HipGal_scaffold_29171               42972 23 +     43066 TCCA---CA---GTCTG--------CAA-T--GTG--C--T--C------T--C
i Hipposideros_galeritus.HipGal_scaffold_29171           I 3 I 2
s Hoolock_leuconedys.ctg274                                    435922 22 +    630532 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--G
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46059 25 +     55795 TCCA---GA---GACCT--------CAG-T--ATA--C--T--CT--T--T--T
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84089 11 +    135385 TCTG---CC---ATCTT-------------------------------------
i Hystrix_cristata.HysCri_scaffold_5660                  I 3 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7521986 19 -   7955117 --TT---CTACCATCCT--------CAG-G--GTG-------------------
i Ictidomys_tridecemlineatus.JH393364.1                  I 2 C 0
s Indri_indri.k141_3655594                                   23553 23 +     31101 CCCA---CA---TGCCT--------CAA-G--GTG--T--T--C------T--G
i Indri_indri.k141_3655594                               C 0 I 2
s Inia_geoffrensis.IniGeo_flattened_line_48101               23610 25 +     23964 TCCA---CT---GTCCT--------CAC-T--GTT--CTGT--C------T--C
i Inia_geoffrensis.IniGeo_flattened_line_48101           I 3 C 0
s Jaculus_jaculus.JH725527.1                               8278148 20 -   9596543 TCTA---CA---ATCAT--------CAC-A--GTA--C--T-------------
i Jaculus_jaculus.JH725527.1                             I 3 I 2
s Kogia_breviceps.KogBre_flattened_line_192630                2967 25 -      3359 TCCA---CT---GTCCT--------CAC-T--GTT--CTGT--C------T--C
i Kogia_breviceps.KogBre_flattened_line_192630           I 3 C 0
s Lasiurus_borealis.LasBor_scaffold_50988                    16181 23 +     29960 TCCA---CA---GTCCT--------CGG-T--GCA--C--T--C------C--C
i Lasiurus_borealis.LasBor_scaffold_50988                I 56 I 96
s Lemur_catta.scaffold_24                                 15525111 23 -  30322482 CCCA---CC---TGCCT--------CAA-G--GTG--C--T--C------T--C
i Lemur_catta.scaffold_24                                C 0 I 2
s Leontocebus_fuscicollis.k141_1820339                        9030 22 +     64341 GTCC---CA---TA-CT--------CAA-A--GCA--C--T--------CT--C
i Leontocebus_fuscicollis.k141_1820339                   C 0 I 4
s Leontocebus_illigeri.k141_1304848                           1370 22 -     35062 GTCC---CA---TA-CT--------CAA-A--GCA--C--T--------CT--C
i Leontocebus_illigeri.k141_1304848                      C 0 I 4
s Leontocebus_nigricollis.k141_4610752                        9057 22 +     35603 GTCC---CA---TA-CT--------CAA-A--GCA--C--T--------CT--C
i Leontocebus_nigricollis.k141_4610752                   C 0 I 4
s Leontopithecus_chrysomelas.k141_1519602                    30670 22 +     38576 GCCC---CA---TA-CT--------CAA-A--GCA--C--T--------CT--C
i Leontopithecus_chrysomelas.k141_1519602                C 0 I 4
s Leontopithecus_rosalia.k141_464620                         27374 22 +     66356 GCCC---CA---TA-CT--------CAA-A--GCA--C--T--------CT--C
i Leontopithecus_rosalia.k141_464620                     C 0 I 4
s Lepilemur_ankaranensis.k141_596936                         12000 19 -     23766 CCCA---CC---TGCCT--------CAA-G--GTG--C----------------
i Lepilemur_ankaranensis.k141_596936                     C 0 I 758
s Lepilemur_dorsalis.k141_577674                             30054 19 +     45836 TCCA---CC---TGCCT--------CAA-G--GTG--C----------------
i Lepilemur_dorsalis.k141_577674                         C 0 I 753
s Lepilemur_ruficaudatus.k141_121139                          2599 19 +     25010 CCCA---CC---TGCCT--------CAA-G--GTG--C----------------
i Lepilemur_ruficaudatus.k141_121139                     C 0 I 750
s Lepilemur_septentrionalis.k141_185316                      27994 19 +     54090 CCCA---CC---TGCCT--------CAA-G--GTG--C----------------
i Lepilemur_septentrionalis.k141_185316                  C 0 I 758
s Leptonychotes_weddellii.KB714746.1                       3044102 25 +   3914936 tcca---ca---gtcct--------cag-t--ata--c--t-----ctc-t--c
i Leptonychotes_weddellii.KB714746.1                     I 3 C 0
s Lepus_americanus.LepAme_scaffold_107385                     7769 23 -     14121 CACT---CA---GTACT-------C-AA-T--ACA--T--T--C------T--C
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 2
s Lipotes_vexillifer.KE559953.1                             268661 25 -    662738 tcca---ct---gtcct--------cac-t--gtt--ctgt-------c-t--c
i Lipotes_vexillifer.KE559953.1                          I 3 C 0
s Lophocebus_aterrimus.ctg367                              1438272 22 +   1826925 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_399337                            15975 23 -     33856 TCCA---CA---TGCCT--------CAA-T--GTT--C--T--C------T--C
i Loris_lydekkerianus.k141_399337                        C 0 I 2
s Loris_tardigradus.ctg83                                  1013686 23 +   6120653 TCCA---CA---TGCCT--------CAA-T--GTT--C--T--C------T--C
i Loris_tardigradus.ctg83                                C 0 I 2
s Loxodonta_africana.GL010049.1                            4219594 29 -  43346337 GCTA---CA---GCCCT--------CAA-T--GTA--C--TTACT-CTG-T--C
i Loxodonta_africana.GL010049.1                          I 4 C 0
s Lycaon_pictus.CM007581.1                                17956365 25 -  59628241 tcca---cg---gccct--------gag-t--gaa--c--c-----ctc-t--c
i Lycaon_pictus.CM007581.1                               I 3 C 0
s Macaca_arctoides.k141_2326796                               8087 22 +     40492 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59677346 22 +  60120075 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13862 22 -     26193 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            81646 22 -    114318 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  7333 22 -     23192 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16813  4 -     29190 ----------------------------------------T--------CT--C
i Macaca_leonina.k141_3550399                            I 7 C 0
s Macaca_maura.k141_2733130                                  25371 22 +     37952 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186840460 22 + 187317192 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25459030  4 -  25927173 ----------------------------------------T--------CT--C
i Macaca_nemestrina.KQ007038.1                           I 7 C 0
s Macaca_nigra.k141_1655396                                  81219 22 +     89720 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 8220 22 +     20474 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   8027  4 -     14993 ----------------------------------------T--------CT--C
i Macaca_siberu.k141_635500                              I 7 C 0
s Macaca_silenus.Contig273                                  330893  4 -    668171 ----------------------------------------T--------CT--C
i Macaca_silenus.Contig273                               I 7 C 0
s Macaca_thibetana.k99_256239                                 6333 22 -     24072 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26958 22 -     45290 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91671 23 +     94391 tcca---ca---gtcct--------caa-t--gca--c--t-------c-t--c
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 3 I 2
s Mandrillus_leucophaeus.scaffold280                      23938549 22 -  24302211 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352671 22 +    752769 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              19296 26 +    737560 TCCA---CAA--GTCCT--------TGA-C--GTA--C--TT--T-C---C--C
i Manis_javanica.JSZB01003497.1                          I 3 C 0
s Manis_pentadactyla.KN006162.1                              51282 26 -    317179 TCCA---CAA--GTCCT--------TGA-C--GTA--C--TT--T-C---C--C
i Manis_pentadactyla.KN006162.1                          I 3 C 0
s Marmota_marmota.CZRN01000018.1                          33104273 19 -  40650429 --TT---CTACCATCCT--------CAG-G--GTG-------------------
i Marmota_marmota.CZRN01000018.1                         I 2 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        14382 23 -    207569 TCCA---CA---GTCCT--------CAG-T--GCT--C--T--C------T--C
i Megaderma_lyra.MegLyr_scaffold_4542                    I 3 I 2
s Mellivora_capensis.MelCap_flattened_line_69365             11357 33 +     13704 TCCA---CA---GTCCTCAGTTTCTCAG-T--GAA--C--T--CT-C---C--C
i Mellivora_capensis.MelCap_flattened_line_69365         I 8 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 33739 20 +    140813 TCCA---CA---GTTCT--------CAT-A--GGA--T--G-------------
i Meriones_unguiculatus.MerUng_scaffold_7390             I 3 I 2
s Mesocricetus_auratus.KB708134.1                         12183203  7 -  29670104 TCCA---CA---G-----------------------------------------
i Mesocricetus_auratus.KB708134.1                        I 3 I 6
s Mesoplodon_bidens.MesBid_scaffold_108144                    4278 25 +     10310 TCCA---CT---GTCCT--------CAC-T--GTT--CTGTT--------T--C
i Mesoplodon_bidens.MesBid_scaffold_108144               I 3 C 0
s Mico_argentatus.k141_1239457                                7187 22 -      7380 GCCC---CA---TG-CT--------CAA-A--GCA--C--T--------CT--C
i Mico_argentatus.k141_1239457                           C 0 I 4
s Mico_schneideri.k141_1950671                                      7160 22 -      7356 GCCC---CA---TG-CT--------CAA-A--GCA--C--T--------CT--C
i Mico_schneideri.k141_1950671                                 C 0 I 4
s Microcebus_murinus.CM007674.1                           18292554 23 -  93316391 CCCA---AC---TGCCT--------CAA-G--GTG--T--T--C------T--C
i Microcebus_murinus.CM007674.1                          C 0 I 2
s Microgale_talazaci.MicTal_scaffold_6613                    24515 18 -    145209 GTTC---CA---GCTCT--------CAT-T--GTA-------------------
i Microgale_talazaci.MicTal_scaffold_6613                I 4 I 7
s Micronycteris_hirsuta.MicHir_scaffold_52381                16900 20 -     19307 TCCA---CA---GACCT--------CAA-C--GTA--C--T-------------
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 3 I 3
s Microtus_ochrogaster.CM001695.1                         11261496 20 -  27267610 TCCA---CA---GTGCT--------CAT-A--AAA--T--G-------------
i Microtus_ochrogaster.CM001695.1                        I 3 I 2
s Miopithecus_ogouensis.k141_534055                          10253  8 -     28506 GCCC---CA---CA----------------------------------------
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6969 25 -      8324 TCCA---CG---GTCCT--------CAG-T--ATA--C--T--CT-C---T--C
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 3 C 0
s Mirza_zaza.k141_952172                                     10097 23 -     37649 CCCA---TC---TGCCT--------TAA-A--GTG--C--T--C------T--C
i Mirza_zaza.k141_952172                                 C 0 I 2
s Monodon_monoceros.MonMon_M_scaffold_103                    27784 25 -    437263 tcca---ct---gtcct--------cac-t--gtt--ctgt-------c-t--c
i Monodon_monoceros.MonMon_M_scaffold_103                I 3 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142689 23 -    366855 TCAG---CA---GCCCT--------CTG-T--GTA--C--T--C------C--C
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 3 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   1725 25 +     82753 tcca---ta---gtccc--------cac-t--gtt--c--t-----gtc-t--c
i Moschus_moschiferus.MosMos_scaffold_13123              I 3 C 0
s Murina_feae.MurFea_scaffold_85699                           7867 23 +     14753 CCCA---CA---GTCTT--------CAA-T--GCA--C--T--C------C--C
i Murina_feae.MurFea_scaffold_85699                      I 3 C 0
s Mus_caroli.LT608237.1                                   84362355 20 - 120012414 TCCA---CA---GTTCT--------CAT-A--AAC--T--A-------------
i Mus_caroli.LT608237.1                                  I 3 I 2
s Mus_musculus.chr8                                       87651348 20 - 129401213 TCCA---CA---GTTCT--------CAT-A--AGC--T--A-------------
i Mus_musculus.chr8                                      I 3 I 2
s Mus_pahari.LT608297.1                                   31356002 20 -  89631738 TCCA---CC---GTTCT--------CAT-A--AGC--T--A-------------
i Mus_pahari.LT608297.1                                  I 3 I 2
s Mus_spretus.CM004101.1                                  90753411 20 - 130317789 TCCA---CA---GTTCT--------CAT-A--AGC--T--A-------------
i Mus_spretus.CM004101.1                                 I 3 I 2
s Mustela_putorius.JH418006.1                               302750 33 -  14710649 TCCA---CA---GTCCTCAGTTCCTCAG-T--GCA--C--T--CT-C---T--C
i Mustela_putorius.JH418006.1                            I 3 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     72214 22 -     80779 TCTA---CC---TACTT--------C-AAG--GCACTG--G-------------
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 3 C 0
s Myotis_brandtii.KE162005.1                                281509 23 -  10118263 TCCA---CA---GTCCT--------CAA-T--GCA--C--T--C------C--C
i Myotis_brandtii.KE162005.1                             I 3 C 0
s Myotis_davidii.KB100139.1                                1588764 23 -   6019432 TCCA---CA---GTCCT--------CAA-T--GCA--C--T--C------C--C
i Myotis_davidii.KB100139.1                              I 3 C 0
s Myotis_lucifugus.GL429869.1                              3904861 23 -   4330536 TCCA---CA---GTCCT--------CAA-T--GCA--C--T--C------C--C
i Myotis_lucifugus.GL429869.1                            I 3 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                        1012 23 +      1835 TCCA---CA---GTCCT--------CAA-T--GCA--C--T--C------C--C
i Myotis_myotis.MyoMyo_scaffold_281845                   I 3 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190280 20 +    196477 GCCA---CA---GTCCT--------CTC-T--GGA--C--A-------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 4 I 1
s Nannospalax_galili.KL204047.1                            2035565 20 -   3037898 TGCT---CA---GTCTT--------CAG-A--GGA--C--T-------------
i Nannospalax_galili.KL204047.1                          I 3 I 2
s Nasalis_larvatus.k141_413338                               16256 22 +     21681 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308562 25 +  31847680 tcca---ca---gtcct--------cag-t--ata--c--t-----ctc-t--c
i Neomonachus_schauinslandi.NINY01007730.1               I 3 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5866741 25 +   7148211 tcca---ct---gtcct--------cac-t--gtt--ctgt-------c-t--c
i Neophocaena_asiaeorientalis.KZ687982.1                 I 3 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    758906 12 +    783361 TCCA---CA---GCCTT--------C----------------------------
i Noctilio_leporinus.NocLep_scaffold_251                 I 3 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150427 26 -   9404916 tcca---cg---gccct--------gag-t-tgaa--c--c-----ctc-t--c
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 3 C 0
s Nycticebus_bengalensis.LG01                            102587215 23 - 196305487 TCCA---CA---TGCCT--------CAA-T--GTT--C--TT--------T--C
i Nycticebus_bengalensis.LG01                            C 0 I 2
s Nycticebus_coucang.k141_1127096                             1139 23 +      2075 TCCA---CA---TGCCT--------CAA-T--GTT--C--TT--------T--C
i Nycticebus_coucang.k141_1127096                        C 0 I 2
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105762570 23 + 199412804 TCCA---CA---TGCCT--------CAA-T--GTT--C--TT--------T--C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 2
s Ochotona_princeps.JH802162.1                             1365223 22 +   3988456 CCCT---CA---GTACT---------AA-T--ATA--T--T--C------T--T
i Ochotona_princeps.JH802162.1                           C 0 I 2
s Odobenus_rosmarus.KB229312.1                              507707 25 -   2017862 tcca---ca---gtcct--------cag-t--att--c--t-----ctc-t--c
i Odobenus_rosmarus.KB229312.1                           I 3 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          77557 25 -    150152 TCCA---CA---GTCCT--------CAC-T--GTT--C--T--GT-C---T--C
i Okapia_johnstoni.LVCL01S0005463.1                      I 3 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   26145 20 +     28053 TCCA---CA---GTGCT--------CAT-A--GGA--T--G-------------
i Ondatra_zibethicus.OndZib_scaffold_46174               I 3 I 2
s Onychomys_torridus.OnyTor_scaffold_2986                    81182 20 +    102263 TCCA---CA---GTCCT--------CAT-A--GGA--T--G-------------
i Onychomys_torridus.OnyTor_scaffold_2986                I 3 I 2
s Orcinus_orca.KB316932.1                                  2782664 25 -  10937097 TCCA---CT---GTCCT--------CAC-T--GTT--CTGT--C------T--C
i Orcinus_orca.KB316932.1                                I 3 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387              12198 29 -     18566 GCTA---CA---GCCCT--------CAA-T--GTA--C--A-ACTTCTC-T--C
i Orycteropus_afer.OryAfe_flattened_line_144387          I 4 C 0
s Oryctolagus_cuniculus.CM000791.1                        67148670 23 + 174332312 CACT---CA---GTACT-------C-AA-T--ACA--T--T--C------T--C
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 2
s Otocyon_megalotis.JAEUCK010005147.1                       463377 25 -    559221 acca---cg---gccct--------gag-t--gaa--c--c-----ttc-t--c
i Otocyon_megalotis.JAEUCK010005147.1                    I 3 C 0
s Otolemur_crassicaudatus.k141_222918                         5124 23 +      8798 TCCA---CA---TGCCT--------CAA-G--GTT--C--T--C------T--C
i Otolemur_crassicaudatus.k141_222918                    C 0 I 2
s Otolemur_garnettii.GL873799.1                             697286 23 -   1103335 TCCA---CA---TGCCT--------CAA-G--GTT--C--T--C------T--C
i Otolemur_garnettii.GL873799.1                          C 0 I 2
s Ovis_aries.CM001607.2                                   17586823 25 +  44047080 tcca---ta---gtcct--------cac-t--gtt--c--g-----gtc-t--c
i Ovis_aries.CM001607.2                                  I 3 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      174800 25 -    191736 tcca---ta---gtcct--------cac-t--gtt--c--g-----gtc-t--c
i Ovis_canadensis.OviCan_scaffold_2572                   I 3 C 0
s Pan_paniscus.KQ411613.1                                    45209 19 +     80009 GCCC---CA---AG-CT--------CAA-A--GCA--C--T-------------
i Pan_paniscus.KQ411613.1                                C 0 I 1
s Pan_troglodytes.NBAG03001836.1                             31131 19 +     51860 GCCC---CA---AG-CT--------CAA-A--GCA--C--T-------------
i Pan_troglodytes.NBAG03001836.1                         I 159 I 747
s Panthera_onca.PanOnc_flattened_line_3271                  152181 25 +    230217 TCCA---CA---GCCCT--------CAG-T--GTA--C--T--CT-C---T--C
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                265390 25 +  18783137 TCCA---CA---GCCCT--------CAG-T--GTA--C--T--CT-C---T--C
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4722270 25 -   8748460 TCCA---CA---GCCCT--------CAG-T--GTA--C--T--CT-C---T--C
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1265718 25 -   2937107 tcca---ta---gtcct--------cac-t--gtt--c--t-----gtc-c--c
i Pantholops_hodgsonii.KE114653.1                        I 3 C 0
s Papio_anubis.CM001495.2                                183444349 22 + 183742232 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             7995 22 +     20448 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20564807 22 +  20919399 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6739 22 +     41871 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--G
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    10032 22 +     27711 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  1029 22 -     11374 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13676 25 -     78924 TCCA---CA---GTCCT--------CAG-T--GTA--C--T--CT--T--T--C
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_855320                           11115 23 +     13100 TCCA---CA---TGCCT--------CAA-G--GTT--C--T--C------T--C
i Perodicticus_ibeanus.k141_855320                       C 0 I 2
s Perodicticus_potto.k141_1092580                             9509 23 +     25941 TCCA---CA---TGCCT--------CAA-G--GTT--C--T--C------T--C
i Perodicticus_potto.k141_1092580                        C 0 I 2
s Peromyscus_maniculatus.KI615324.1                       18195761 20 -  18517816 TCCA---CA---GTCCT--------CAT-A--GGA--T--G-------------
i Peromyscus_maniculatus.KI615324.1                      I 3 I 2
s Petromus_typicus.PetTyp_scaffold_42190                     29113 22 -     29689 TCTG---TC---ATCCT--------C-AAG--GCATTG--G-------------
i Petromus_typicus.PetTyp_scaffold_42190                 I 3 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               9703 25 +     63832 tcca---ct---gtcct--------cac-t--gtt--ctgt-------c-t--c
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 3 C 0
s Piliocolobus_badius.k141_1234363                           44748 22 +     62158 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        39495 22 +     89929 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40911 22 +     51399 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14297150 22 -  14605196 GCCC---CA---CA-CT--------CAA-a--gca--c--t--------ct--c
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 2
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2801 23 +     22620 TCCA---CA---GTCCT--------CAG-T--GCA--C--T--C------C--C
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 3 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           35404 25 +     35617 TCCC---CT---GTCCT--------CAC-T--GTT--CTGT--C------T--C
i Platanista_gangetica.PlaMin_flattened_line_32310       I 3 C 0
s Pongo_abelii.CM009266.2                                189132252 22 + 189387572 GCCC---CA---CA-CT--------CAA-A--GCA--G--T--------CT--C
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9571859 22 +   9816681 GCCC---CA---CA-CT--------CAA-A--GCA--G--T--------CT--C
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               74431 22 -     81375 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              6252 22 +     19060 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 15719 19 -     22811 GCTA---CA---GCTCT--------CAA-A--ACA--C----------------
i Procavia_capensis.ProCapCap_scaffold_85530             I 4 I 8
s Prolemur_simus.MPIZ01000396.1                            2597791 23 -   4620579 CCCA---CC---CACCT--------CAA-G--GTG--C--T--C------T--C
i Prolemur_simus.MPIZ01000396.1                          C 0 I 2
s Propithecus_coquerelli.NW_012148875.1                     991774 23 +   2598838 CCCA---CA---CTCCT--------CAA-G--GTG--T--T--C------T--C
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 2
s Propithecus_coronatus.k141_347390                          30086 23 +     38485 CCCA---CA---CTCCT--------CAA-G--GTG--T--T--C------T--T
i Propithecus_coronatus.k141_347390                      C 0 I 2
s Propithecus_diadema.k141_58108                              2128 23 -     13098 CCCA---CA---CTCCT--------CAA-G--GTG--T--T--C------T--C
i Propithecus_diadema.k141_58108                         C 0 I 2
s Propithecus_edwardsi.k141_1176054                          27607 23 +     35766 CCCA---CA---CTCCT--------CAA-G--GTG--T--T--C------T--C
i Propithecus_edwardsi.k141_1176054                      C 0 I 2
s Propithecus_perrieri.k141_1200571                           5794 23 -     24134 CCCA---CA---CTCCT--------CAA-G--GTG--T--T--C------T--C
i Propithecus_perrieri.k141_1200571                      C 0 I 2
s Propithecus_tattersalli.k141_790011                        29619 23 -     67325 CCCA---CA---CTCCT--------CAA-G--GTG--T--T--C------T--C
i Propithecus_tattersalli.k141_790011                    C 0 I 2
s Propithecus_verreauxi.k141_956661                           5842 23 -      6182 CCCA---CA---CTCCT--------CAA-G--GTG--T--T--C------T--C
i Propithecus_verreauxi.k141_956661                      C 0 I 2
s Psammomys_obesus.NESX01036370.1                            11385 20 -     21651 TCCA---CA---GTTCT--------CAT-A--GGA--T--G-------------
i Psammomys_obesus.NESX01036370.1                        I 3 I 2
s Pteronotus_parnellii.KE909381.1                            16184 23 -     21811 CCTG---CA---GCCCT--------CAA-T--GTG--C--T--C------C--C
i Pteronotus_parnellii.KE909381.1                        I 2 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41557 33 +     42204 tcca---ca---gtcctcaGTTCCTCAG-T--GTA--C--T--CT-C---T--C
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 3 C 0
s Pteropus_alecto.KB030862.1                              22977812 23 +  28871421 tcca---ca---gtcct--------caa-t--gca--c--t-------c-t--c
i Pteropus_alecto.KB030862.1                             I 3 I 2
s Pteropus_vampyrus.KN534172.1                                7865 23 -      8028 tcca---ca---gtcct--------caa-t--gaa--c--t-------c-t--c
i Pteropus_vampyrus.KN534172.1                           I 3 I 2
s Puma_concolor.QAVW01001104.1                            20275342 25 -  38429054 TCCA---CA---GCCCT--------CAG-T--GTA--C--T--CT-C---T--C
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             16238 22 -     91421 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7610358 22 +   7812017 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             16237 22 -     72585 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6300 25 +     55207 TCCA---CA---GTCCT--------CAC-T--GTT--C--T--CT-C---T--C
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 3 C 0
s Rattus_norvegicus.chr16                                 53571601 20 +  90668790 TCCA---CA---GTTCT--------CAT-A--GGC--T--A-------------
i Rattus_norvegicus.chr16                                I 3 I 2
s Rhinolophus_sinicus.LVEH01000134.1                        368028 23 -   3329780 tcca---ca---ggcct--------cag-g--gta--c--t-------c-t--c
i Rhinolophus_sinicus.LVEH01000134.1                     I 3 I 2
s Rhinopithecus_bieti.k119_217274                             7948 22 -     11128 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91237297 22 - 195417433 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672953 22 +   7961872 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88854 23 -     96226 tcca---ca---gtcct--------caa-t--gca--c--t-------c-t--c
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 3 I 2
s Saguinus_bicolor.k141_8081                                  2340 22 +     42994 GTCC---CA---TG-CT--------CAA-A--GCA--C--T--------CT--C
i Saguinus_bicolor.k141_8081                             C 0 I 4
s Saguinus_imperator.k141_1496743                             1039 22 +      2253 GTCC---CA---TG-CT--------CAA-A--GCA--C--T--------CT--C
i Saguinus_imperator.k141_1496743                        C 0 I 4
s Saguinus_inustus.k141_3945547                               1468 22 -      8737 GTCC---CA---TG-CT--------CAA-A--GCA--C--T--------CT--C
i Saguinus_inustus.k141_3945547                          C 0 I 4
s Saguinus_labiatus.k141_4004060                              1121 22 +      2343 GTCC---CA---TG-CT--------CAA-A--GCA--C--T--------CT--C
i Saguinus_labiatus.k141_4004060                         C 0 I 4
s Saguinus_midas.LG03                                    209475998 22 + 209938924 ATCC---CA---TG-CT--------CAA-A--GCA--C--T--------CT--C
i Saguinus_midas.LG03                                    C 0 I 4
s Saguinus_mystax.k141_4699220                                 444 22 -      7576 GTCC---CA---TG-CT--------CAA-A--GCA--C--T--------CT--C
i Saguinus_mystax.k141_4699220                           C 0 I 4
s Saimiri_boliviensis.NW_024100920.1                     119952076 24 - 121099817 GCCC---CG---TA-CT--------CAA-A--GCA--C--T--CT----CT--C
i Saimiri_boliviensis.NW_024100920.1                     C 0 I 2
s Saimiri_cassiquiarensis.k141_2188234                       24418 24 +     46362 GCCC---CG---TA-CT--------CAA-A--GCA--C--T--CT----CT--C
i Saimiri_cassiquiarensis.k141_2188234                   C 0 I 2
s Saimiri_macrodon.k141_716185                               24513 24 +     45824 GCCC---CG---TA-CT--------CAA-A--GCA--C--T--CT----CT--C
i Saimiri_macrodon.k141_716185                           C 0 I 2
s Saimiri_oerstedii.k141_1487881                             41192 24 -     64574 GCCC---CG---TA-CT--------CAA-A--GCA--C--T--CT----CT--C
i Saimiri_oerstedii.k141_1487881                         C 0 I 2
s Saimiri_sciureus.k141_2278166                               4265 24 -     23631 GCCC---CG---TA-CT--------CAA-A--GCA--C--T--CT----CT--C
i Saimiri_sciureus.k141_2278166                          C 0 I 2
s Saimiri_ustus.k141_1484609                                 24409 24 -     61129 GCCC---CG---TA-CT--------CAA-A--GCA--C--T--CT----CT--C
i Saimiri_ustus.k141_1484609                             C 0 I 2
s Sapajus_apella.ctg103                                    5421757 22 -   5703754 GGCC---CA---TG-AT--------CAA-A--GCA--C--T--------CT--C
i Sapajus_apella.ctg103                                  C 0 I 2
s Sapajus_macrocephalus.k141_351809                          56998 22 -     80660 GGCC---CA---TG-AT--------CAA-A--GCA--C--T--------CT--C
i Sapajus_macrocephalus.k141_351809                      C 0 I 2
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154232 23 -    313613 TCCA---CA---GTCCC--------CAA-T--GTG--C--T--C------T--C
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 3 I 2
s Semnopithecus_entellus.k141_1672505                         1129 22 -     12572 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      27979 22 +     39453 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            8497 22 +     27826 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             8019 22 -     19483 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      1320 22 -     12762 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           1181 22 +     13763 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     1284 20 -     30804 TCCA---CA---GTCCT--------AAT-A--GGA--T--G-------------
i Sigmodon_hispidus.SigHis_scaffold_42075                I 3 I 2
s Solenodon_paradoxus.SolPar_flattened_line_126               4791 23 +   1910179 TCC----CA---ATCTT--------CAA-A--GTA--C--TT-C------T--C
i Solenodon_paradoxus.SolPar_flattened_line_126          I 3 C 0
s Sorex_araneus.JH798187.1                                13652032 19 -  18376816 TTC----AA---ATTCT--------CAA-T--GCA--C--T-------------
i Sorex_araneus.JH798187.1                               I 3 I 1
s Spermophilus_dauricus.KZ294078.1                         1955133 19 -   3870691 --TT---CTACCATCCT--------CAG-G--GTG-------------------
i Spermophilus_dauricus.KZ294078.1                       I 2 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             32031 33 +     97271 TCCA---CA---GTCCTCAGTTCCTCAG-T--GTA--C--T--CT-C---T--C
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 3 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              19361 23 -    196729 TCCA---CA---GTGCT--------CAG-T--GCA--C--T--C------T--T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.JH118708.1                                      37435 23 -     47482 TCCA---GA---GTCCT--------TAT-T--GCT--C--T--C------T--C
i Sus_scrofa.JH118708.1                                  I 3 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                11854 23 +     41958 TCCA---CA---GTCCT--------CAA-T--GTA--C--T--C------C--C
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 3 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73645 20 +    116680 GCTA---CA---GTCCT--------CTC-T--GGA--T--A-------------
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 4 I 1
s Tapirus_indicus.TapInd_scaffold_9301                      119813  8 -    156842 tcca---ca---gt----------------------------------------
i Tapirus_indicus.TapInd_scaffold_9301                   I 3 I 19
s Tapirus_terrestris.TapTer_scaffold_755                    388283  8 +    539355 tcca---ca---gt----------------------------------------
i Tapirus_terrestris.TapTer_scaffold_755                 I 3 I 19
s Theropithecus_gelada.CM009954.1                        186429667 22 + 186847797 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106405 22 +    114563 TCTG---TC---ACCCT--------C-AAG--GTATTG--G-------------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 3 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   7384 20 +      8208 GCCA---CC---GTCCT--------CAC-T--GGA--C--A-------------
i Tolypeutes_matacus.TolMat_scaffold_228639              I 3 I 1
s Tonatia_saurophila.TonSau_scaffold_294                     82243 23 +    610378 tcca---ca---gccct--------cag-t--gta--c--t-------c-c--c
i Tonatia_saurophila.TonSau_scaffold_294                 I 3 C 0
s Trachypithecus_auratus.k141_722599                         12070 22 -     20410 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      1184 22 -     12674 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       12171 22 +     19930 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       8582 22 -     19997 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48721 22 -     60166 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        16193 22 -     27529 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     16137 22 -     18194 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9849 22 -     21137 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    8552 22 -     10723 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7724 22 +      9834 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        26037 22 +     32220 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5940139 22 +   6242583 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--C
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        9390 22 +     20839 GCCC---CA---CA-CT--------CAA-A--GCA--C--T--------CT--T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                     656 25 +     27266 TCCA---CA---GTCCT--------CAC-T--ATT--C--T--GT-C---T--C
i Tragulus_javanicus.TraJav_scaffold_40725               I 3 C 0
s Trichechus_manatus.JH594705.1                            4294882 29 +  10818551 GCTA---CA---GCCCT--------CAA-G--GTA--C--CCTCT-CTC-T--C
i Trichechus_manatus.JH594705.1                          I 4 C 0
s Tupaia_chinensis.KB320699.1                              2156816 20 +   4065304 CCTG---CA---GTCCT--------CAG-T--GTA--C--T-------------
i Tupaia_chinensis.KB320699.1                            I 3 I 1
s Tupaia_tana.TupTan_flattened_line_97126                    10262 22 -     10553 TCTA---CA---GTCTT--------CAG-TGTGTA--C--T-------------
i Tupaia_tana.TupTan_flattened_line_97126                I 3 I 1
s Tursiops_truncatus.MRVK01000835.1                       15738909 25 +  33153633 TCCA---CT---GTCCT--------CAC-T--GTT--CTGT--C------T--C
i Tursiops_truncatus.MRVK01000835.1                      I 3 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54330 23 -     77625 tcca---ca---gttct--------cta-a--gag--c--t-------c-t--c
i Uropsilus_gracilis.UroGra_scaffold_12083               I 3 I 2
s Ursus_maritimus.KK499267.1                               4851476 15 -   5085361 TCCA---CA---GTCCT--------CAG-T------------------------
i Ursus_maritimus.KK499267.1                             I 3 I 2
s Varecia_rubra.k141_590885                                  12450 23 +     50397 CCCA---CC---CGCCT--------CAA-G--ATG--C--T--C------T--C
i Varecia_rubra.k141_590885                              C 0 I 2
s Varecia_variegata.k141_1128296                             12509 23 +     24756 CCCA---CC---CGCCT--------CAA-G--ATG--C--T--C------T--C
i Varecia_variegata.k141_1128296                         C 0 I 2
s Vicugna_pacos.KN270157.1                                 5372799 25 -   5488506 CCCA---CC---ATCCT--------CAT-T--GCT--C--C--C------CCTC
i Vicugna_pacos.KN270157.1                               I 3 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 11825 25 -     43706 tcca---cg---gccct--------gag-t--gaa--c--c-----ctc-t--c
i Vulpes_lagopus.VulLag_flattened_line_30954             I 3 C 0
s Xerus_inauris.XerIna_scaffold_2302                          2107 16 +    224448 --TT---CA---GTCCT--------CAA-G--GTA-------------------
i Xerus_inauris.XerIna_scaffold_2302                     I 2 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      15884 20 +     63895 TTTG---TA---ATCTT--------CAA-A--GTA--C--T-------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 3 I 2
s Ziphius_cavirostris.ZipCav_flattened_line_3601914            256 25 +       295 TCCA---CT---GTCCT--------CAC-T--GTT--CTGT--C------T--C
i Ziphius_cavirostris.ZipCav_flattened_line_3601914      I 3 C 0
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Tarsius_wallacei.k141_254427                                1877  3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080  3 +     70052 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             35221  4 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1851541  4 +   8254450 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Glis_glis.GliGli_scaffold_19807                            32063  0 +     49224 C
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cephalopachus_bancanus.k141_1423433                         6085  3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Carlito_syrichta.NW_007259797.1                           156587  3 -    496798 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       7888 2 +     62944 TC
s Allenopithecus_nigroviridis.k141_3361533                   15814 2 -     52922 TC
i Allenopithecus_nigroviridis.k141_3361533               C 0 I 2
s Allochrocebus_lhoesti.k141_4309873                         15734 2 -     28001 TC
i Allochrocebus_lhoesti.k141_4309873                     C 0 I 2
s Allochrocebus_preussi.k141_1442296                          6232 2 -     18505 TC
i Allochrocebus_preussi.k141_1442296                     C 0 I 2
s Allochrocebus_solatus.k141_166128                           7084 2 -     12518 TC
i Allochrocebus_solatus.k141_166128                      C 0 I 2
s Cercocebus_atys.KQ010504.1                               4476751 2 +   4669795 TC
i Cercocebus_atys.KQ010504.1                             C 0 I 2
s Cercocebus_chrysogaster.k141_1540778                        1253 2 +     17872 TC
i Cercocebus_chrysogaster.k141_1540778                   C 0 I 2
s Cercocebus_lunulatus.k141_3342297                           1842 2 -     14043 TC
i Cercocebus_lunulatus.k141_3342297                      C 0 I 2
s Cercocebus_torquatus.k141_3057011                           9943 2 +     27781 TC
i Cercocebus_torquatus.k141_3057011                      C 0 I 2
s Cercopithecus_ascanius.k141_1024104                        10111 2 -     20310 TC
i Cercopithecus_ascanius.k141_1024104                    C 0 I 2
s Cercopithecus_cephus.k141_1078548                          13091 2 +     29689 TC
i Cercopithecus_cephus.k141_1078548                      C 0 I 2
s Cercopithecus_diana.k141_1150327                            7837 2 -     20078 TC
i Cercopithecus_diana.k141_1150327                       C 0 I 2
s Cercopithecus_hamlyni.k141_187466                          15759 2 -     27936 TC
i Cercopithecus_hamlyni.k141_187466                      C 0 I 2
s Cercopithecus_lowei.k141_1854285                            4625 2 -     17152 TC
i Cercopithecus_lowei.k141_1854285                       C 0 I 2
s Cercopithecus_albogularis.ctg5                                38818170 2 +  39242232 TC
i Cercopithecus_albogularis.ctg5                               C 0 I 2
s Cercopithecus_mona.ctg39                                21223859 2 -  21565898 TC
i Cercopithecus_mona.ctg39                               C 0 I 2
s Cercopithecus_neglectus.k141_2526306                       40978 2 -     53127 TC
i Cercopithecus_neglectus.k141_2526306                   C 0 I 2
s Cercopithecus_nictitans.k141_1119862                        1229 2 +     13442 TC
i Cercopithecus_nictitans.k141_1119862                   C 0 I 2
s Cercopithecus_petaurista.k141_807961                       15778 2 -     27947 TC
i Cercopithecus_petaurista.k141_807961                   C 0 I 2
s Cercopithecus_pogonias.k141_822820                         15754 2 +     17596 TC
i Cercopithecus_pogonias.k141_822820                     C 0 I 2
s Cercopithecus_roloway.k141_2581234                          1797 2 +     14005 TC
i Cercopithecus_roloway.k141_2581234                     C 0 I 2
s Chlorocebus_aethiops.ctg25                              18429736 2 -  18827391 TC
i Chlorocebus_aethiops.ctg25                             C 0 I 2
s Chlorocebus_pygerythrus.k141_1025673                       16172 2 -     50209 TC
i Chlorocebus_pygerythrus.k141_1025673                   C 0 I 2
s Chlorocebus_sabaeus.CM001947.1                         135423173 2 + 135778131 TC
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 2
s Colobus_angolensis.KN981557.1                            1911651 2 +   2368649 TC
i Colobus_angolensis.KN981557.1                          C 0 I 2
s Colobus_guereza.LG01                                   199949903 2 + 200372422 TC
i Colobus_guereza.LG01                                   C 0 I 2
s Colobus_polykomos.k141_906115                              38185 2 +     84244 TC
i Colobus_polykomos.k141_906115                          C 0 I 2
s Erythrocebus_patas.Contig38                             21206341 2 -  21539334 TC
i Erythrocebus_patas.Contig38                            C 0 I 2
s Gorilla_beringei.k141_3596273                              17143 2 -     32273 TC
i Gorilla_beringei.k141_3596273                          C 0 I 2
s Gorilla_gorilla.LT578341.1                             186339278 2 + 186649187 TC
i Gorilla_gorilla.LT578341.1                             C 0 I 2
s Hoolock_leuconedys.ctg274                                    435944 2 +    630532 TT
i Hoolock_leuconedys.ctg274                                 C 0 I 2
s Lophocebus_aterrimus.ctg367                              1438294 2 +   1826925 TC
i Lophocebus_aterrimus.ctg367                            C 0 I 2
s Macaca_arctoides.k141_2326796                               8109 2 +     40492 TC
i Macaca_arctoides.k141_2326796                          C 0 I 2
s Macaca_assamensis.Contig5                               59677368 2 +  60120075 TC
i Macaca_assamensis.Contig5                              C 0 I 2
s Macaca_cyclopis.k119_18836                                 13884 2 -     26193 TC
i Macaca_cyclopis.k119_18836                             C 0 I 2
s Macaca_fuscata.k119_255327                                  7355 2 -     23192 TC
i Macaca_fuscata.k119_255327                             C 0 I 2
s Macaca_leonina.k141_3550399                                16817 2 -     29190 TC
i Macaca_leonina.k141_3550399                            C 0 I 2
s Macaca_maura.k141_2733130                                  25393 2 +     37952 TC
i Macaca_maura.k141_2733130                              C 0 I 2
s Macaca_mulatta.NC_041758.1                             186840482 2 + 187317192 TC
i Macaca_mulatta.NC_041758.1                             C 0 I 2
s Macaca_nemestrina.KQ007038.1                            25459034 2 -  25927173 TC
i Macaca_nemestrina.KQ007038.1                           C 0 I 2
s Macaca_nigra.k141_1655396                                  81241 2 +     89720 TC
i Macaca_nigra.k141_1655396                              C 0 I 2
s Macaca_radiata.k141_3680011                                 8242 2 +     20474 TC
i Macaca_radiata.k141_3680011                            C 0 I 2
s Macaca_siberu.k141_635500                                   8031 2 -     14993 TC
i Macaca_siberu.k141_635500                              C 0 I 2
s Macaca_silenus.Contig273                                  330897 2 -    668171 TC
i Macaca_silenus.Contig273                               C 0 I 2
s Macaca_thibetana.k99_256239                                 6355 2 -     24072 TC
i Macaca_thibetana.k99_256239                            C 0 I 2
s Macaca_tonkeana.k141_1498238                               26980 2 -     45290 TC
i Macaca_tonkeana.k141_1498238                           C 0 I 2
s Mandrillus_leucophaeus.scaffold280                      23938571 2 -  24302211 TC
i Mandrillus_leucophaeus.scaffold280                     C 0 I 2
s Mandrillus_sphinx.Contig270                               352693 2 +    752769 TC
i Mandrillus_sphinx.Contig270                            C 0 I 2
s Nasalis_larvatus.k141_413338                               16278 2 +     21681 TC
i Nasalis_larvatus.k141_413338                           C 0 I 2
s Pan_paniscus.KQ411613.1                                    45229 2 +     80009 TC
i Pan_paniscus.KQ411613.1                                I 1 I 2
s Pan_troglodytes.CM009242.2                             189144129 2 + 189151597 TC
i Pan_troglodytes.CM009242.2                             I 22 I 2
s Papio_anubis.CM001495.2                                183444371 2 + 183742232 TC
i Papio_anubis.CM001495.2                                C 0 I 2
s Papio_cynocephalus.k141_4307930                             8017 2 +     20448 TC
i Papio_cynocephalus.k141_4307930                        C 0 I 2
s Papio_hamadryas.Contig39                                20564829 2 +  20919399 TC
i Papio_hamadryas.Contig39                               C 0 I 2
s Papio_kindae.k141_1936966                                   6761 2 +     41871 TC
i Papio_kindae.k141_1936966                              C 0 I 2
s Papio_papio.k141_802527                                    10054 2 +     27711 TC
i Papio_papio.k141_802527                                C 0 I 2
s Papio_ursinus.k141_5274964                                  1051 2 -     11374 TC
i Papio_ursinus.k141_5274964                             C 0 I 2
s Piliocolobus_badius.k141_1234363                           44770 2 +     62158 TC
i Piliocolobus_badius.k141_1234363                       C 0 I 2
s Piliocolobus_gordonorum.k141_381342                        39517 2 +     89929 TC
i Piliocolobus_gordonorum.k141_381342                    C 0 I 2
s Piliocolobus_kirkii.k141_448987                            40933 2 +     51399 TC
i Piliocolobus_kirkii.k141_448987                        C 0 I 2
s Piliocolobus_tephrosceles.PDMG02000141.1                14297174 2 -  14605196 tc
i Piliocolobus_tephrosceles.PDMG02000141.1               I 2 I 2
s Pongo_abelii.CM009266.2                                189132274 2 + 189387572 TC
i Pongo_abelii.CM009266.2                                C 0 I 2
s Pongo_pygmaeus.ctg66                                     9571881 2 +   9816681 TC
i Pongo_pygmaeus.ctg66                                   C 0 I 2
s Presbytis_comata.k141_677006                               74453 2 -     81375 TC
i Presbytis_comata.k141_677006                           C 0 I 2
s Presbytis_mitrata.k141_1087752                              6274 2 +     19060 TC
i Presbytis_mitrata.k141_1087752                         C 0 I 2
s Pygathrix_cinerea.k141_1153803                             16260 2 -     91421 TC
i Pygathrix_cinerea.k141_1153803                         C 0 I 2
s Pygathrix_nigripes_b.ctg100                                 7610380 2 +   7812017 TC
i Pygathrix_nigripes_b.ctg100                               C 0 I 2
s Pygathrix_nigripes_a.k141_215492                             16259 2 -     72585 TC
i Pygathrix_nigripes_a.k141_215492                         C 0 I 2
s Rhinopithecus_bieti.k119_217274                             7970 2 -     11128 TC
i Rhinopithecus_bieti.k119_217274                        C 0 I 2
s Rhinopithecus_roxellana.NC_044550.1                     91237319 2 - 195417433 TC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 2
s Rhinopithecus_strykeri.ctg102                            7672975 2 +   7961872 TC
i Rhinopithecus_strykeri.ctg102                          C 0 I 2
s Semnopithecus_entellus.k141_1672505                         1151 2 -     12572 TC
i Semnopithecus_entellus.k141_1672505                    C 0 I 2
s Semnopithecus_hypoleucos.k141_1615806                      28001 2 +     39453 TC
i Semnopithecus_hypoleucos.k141_1615806                  C 0 I 2
s Semnopithecus_johnii.k141_670120                            8519 2 +     27826 TC
i Semnopithecus_johnii.k141_670120                       C 0 I 2
s Semnopithecus_priam.k141_638794                             8041 2 -     19483 TC
i Semnopithecus_priam.k141_638794                        C 0 I 2
s Semnopithecus_schistaceus.k141_1572284                      1342 2 -     12762 TC
i Semnopithecus_schistaceus.k141_1572284                 C 0 I 2
s Semnopithecus_vetulus.k141_910252                           1203 2 +     13763 TC
i Semnopithecus_vetulus.k141_910252                      C 0 I 2
s Theropithecus_gelada.CM009954.1                        186429689 2 + 186847797 TC
i Theropithecus_gelada.CM009954.1                        C 0 I 2
s Trachypithecus_auratus.k141_722599                         12092 2 -     20410 TC
i Trachypithecus_auratus.k141_722599                     C 0 I 2
s Trachypithecus_crepusculus.k141_582567                      1206 2 -     12674 TC
i Trachypithecus_crepusculus.k141_582567                 C 0 I 2
s Trachypithecus_cristatus.k141_580354                       12193 2 +     19930 TC
i Trachypithecus_cristatus.k141_580354                   C 0 I 2
s Trachypithecus_francoisi.k141_1412647                       8604 2 -     19997 TC
i Trachypithecus_francoisi.k141_1412647                  C 0 I 2
s Trachypithecus_geei.k141_277701                            48743 2 -     60166 TC
i Trachypithecus_geei.k141_277701                        C 0 I 2
s Trachypithecus_germaini.k141_912491                        16215 2 -     27529 TC
i Trachypithecus_germaini.k141_912491                    C 0 I 2
s Trachypithecus_hatinhensis.k141_143409                     16159 2 -     18194 TC
i Trachypithecus_hatinhensis.k141_143409                 C 0 I 2
s Trachypithecus_laotum.k141_907409                           9871 2 -     21137 TC
i Trachypithecus_laotum.k141_907409                      C 0 I 2
s Trachypithecus_leucocephalus.k141_587342                    8574 2 -     10723 TC
i Trachypithecus_leucocephalus.k141_587342               C 0 I 2
s Trachypithecus_melamera.k141_434728                         7746 2 +      9834 TC
i Trachypithecus_melamera.k141_434728                    C 0 I 2
s Trachypithecus_obscurus.k141_190785                        26059 2 +     32220 TC
i Trachypithecus_obscurus.k141_190785                    C 0 I 2
s Trachypithecus_phayrei.ctg124                            5940161 2 +   6242583 TC
i Trachypithecus_phayrei.ctg124                          C 0 I 2
s Trachypithecus_pileatus.k141_2007326                        9412 2 +     20839 TC
i Trachypithecus_pileatus.k141_2007326                   C 0 I 2
e Echinops_telfairi.JH980293.1                            48781819 7 + 111700974 I
e Otolemur_garnettii.GL873799.1                             697309 2 -   1103335 I
e Otolemur_crassicaudatus.k141_222918                         5147 2 +      8798 I
e Galago_senegalensis.k141_631886                             5322 2 +     11339 I
e Galago_moholi.ctg2040                                     427632 2 -    453645 I
e Sapajus_macrocephalus.k141_351809                          57020 2 -     80660 I
e Sapajus_apella.ctg103                                    5421779 2 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24433 2 -     61129 I
e Saimiri_sciureus.k141_2278166                               4289 2 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41216 2 -     64574 I
e Saimiri_macrodon.k141_716185                               24537 2 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24442 2 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952100 2 - 121099817 I
e Saguinus_mystax.k141_4699220                                 466 4 -      7576 I
e Saguinus_midas.LG03                                    209476020 4 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1143 4 +      2343 I
e Saguinus_inustus.k141_3945547                               1490 4 -      8737 I
e Saguinus_imperator.k141_1496743                             1061 4 +      2253 I
e Saguinus_bicolor.k141_8081                                  2362 4 +     42994 I
e Mico_schneideri.k141_1950671                                      7182 4 -      7356 I
e Mico_argentatus.k141_1239457                                7209 4 -      7380 I
e Leontopithecus_rosalia.k141_464620                         27396 4 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30692 4 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9079 4 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1392 4 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9052 4 +     64341 I
e Chiropotes_albinasus.k141_2206961                           2099 2 -     15524 I
e Cebus_unicolor.k141_1837183                                 1492 2 +     14051 I
e Cebus_olivaceus.k141_1764483                                1763 2 +     28840 I
e Cebus_albifrons.Contig27                                25653825 2 +  26074798 I
e Cebuella_pygmaea.k141_1309012                               7397 4 -      7577 I
e Cebuella_niveiventris.k141_1251222                         11213 4 -     11392 I
e Callithrix_kuhlii.k119_1168854                              1287 4 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592473 4 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              612 4 +      5377 I
e Callimico_goeldii.k141_737284                                317 4 -     31217 I
e Callibella_humilis.k141_1278103                             6773 4 -     10423 I
e Aotus_vociferans.k141_344750                               30056 2 -     47192 I
e Aotus_trivirgatus.k141_2152450                             16931 2 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299322 2 -   5030052 I
e Aotus_griseimembra.k141_2240599                            16895 2 -     34016 I
e Aotus_azarae.k141_3104676                                  16898 2 -     33861 I
e Alouatta_seniculus.k141_117119                             15912 2 +     50774 I
e Alouatta_puruensis.k141_362188                              1460 2 +      5663 I
e Alouatta_palliata.k141_2135620                              4728 2 +     47717 I
e Alouatta_nigerrima.k141_1929159                              733 2 +     30492 I
e Alouatta_macconnelli.k141_918386                            1777 2 -      9457 I
e Alouatta_juara.k141_1302312                                  733 2 +     27940 I
e Alouatta_discolor.k141_566626                              12220 2 +     28687 I
e Alouatta_caraya.k141_1701091                                1768 2 -     36483 I
e Alouatta_belzebul.k141_3560514                              8659 2 +     51355 I
e Mus_pahari.LT608297.1                                   31356022 2 -  89631738 I
e Mus_spretus.CM004101.1                                  90753431 2 - 130317789 I
e Mus_musculus.chr8                                       87651368 2 - 129401213 I
e Mus_caroli.LT608237.1                                   84362375 2 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1013709 2 +   6120653 I
e Loris_lydekkerianus.k141_399337                            15998 2 -     33856 I
e Perodicticus_potto.k141_1092580                             9532 2 +     25941 I
e Perodicticus_ibeanus.k141_855320                           11138 2 +     13100 I
e Ziphius_cavirostris.ZipCav_flattened_line_3601914            281 0 +       295 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      15904 2 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Xerus_inauris.XerIna_scaffold_2302                          2123 0 +    224448 C
e Vulpes_lagopus.VulLag_flattened_line_30954                 11850 0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5372824 0 -   5488506 C
e Varecia_variegata.k141_1128296                             12532 2 +     24756 I
e Varecia_rubra.k141_590885                                  12473 2 +     50397 I
e Ursus_maritimus.KK499267.1                               4851491 2 -   5085361 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   54353 2 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738934 0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_97126                    10284 1 -     10553 I
e Tupaia_chinensis.KB320699.1                              2156836 1 +   4065304 I
e Trichechus_manatus.JH594705.1                            4294911 0 +  10818551 C
e Tragulus_javanicus.TraJav_scaffold_40725                     681 0 +     27266 C
e Tonatia_saurophila.TonSau_scaffold_294                     82266 0 +    610378 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   7404 1 +      8208 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              106427 0 +    114563 C
e Tarsius_wallacei.k141_254427                                1877 3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080 3 +     70052 I
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73665 1 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                11877 0 +     41958 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sus_scrofa.JH118708.1                                      37458 0 -     47482 C
e Suricata_suricatta.SurSur_flattened_line_6629              19384 0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             32064 0 +     97271 C
e Spermophilus_dauricus.KZ294078.1                         1955152 0 -   3870691 C
e Sorex_araneus.JH798187.1                                13652051 1 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4814 0 +   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_42075                     1304 2 -     30804 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    154255 2 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                88877 2 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        368051 2 -   3329780 I
e Rattus_norvegicus.chr16                                 53571621 2 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  6325 0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20275367 0 -  38429054 C
e Pteropus_vampyrus.KN534172.1                                7888 2 -      8028 I
e Pteropus_alecto.KB030862.1                              22977835 2 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         41590 0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            16207 0 -     21811 C
e Psammomys_obesus.NESX01036370.1                            11405 2 -     21651 I
e Propithecus_verreauxi.k141_956661                           5865 2 -      6182 I
e Propithecus_tattersalli.k141_790011                        29642 2 -     67325 I
e Propithecus_perrieri.k141_1200571                           5817 2 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27630 2 +     35766 I
e Propithecus_diadema.k141_58108                              2151 2 -     13098 I
e Propithecus_coronatus.k141_347390                          30109 2 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991797 2 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597814 2 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15738 8 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35429 0 +     35617 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             2824 0 +     22620 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               9728 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     29135 0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18195781 2 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13701 0 -     78924 C
e Pantholops_hodgsonii.KE114653.1                          1265743 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4722295 0 -   8748460 C
e Panthera_pardus.KV860321.1                                265415 0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  152206 0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      174825 0 -    191736 C
e Ovis_aries.CM001607.2                                   17586848 0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       463402 0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                        67148693 2 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12227 0 -     18566 C
e Orcinus_orca.KB316932.1                                  2782689 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    81202 2 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   26165 2 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77582 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              507732 0 -   2017862 C
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Ochotona_princeps.JH802162.1                             1365245 2 +   3988456 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105762593 2 + 199412804 I
e Nycticebus_coucang.k141_1127096                             1162 2 +      2075 I
e Nycticebus_bengalensis.LG01                            102587238 2 - 196305487 I
e Nyctereutes_procyonoides.CAJHUB010000658.1               9150453 0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    758918 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866766 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20308587 0 +  31847680 C
e Nannospalax_galili.KL204047.1                            2035585 2 -   3037898 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190300 1 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_281845                        1035 0 +      1835 C
e Myotis_lucifugus.GL429869.1                              3904884 0 -   4330536 C
e Myotis_davidii.KB100139.1                                1588787 0 -   6019432 C
e Myotis_brandtii.KE162005.1                                281532 0 -  10118263 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     72236 0 -     80779 C
e Mustela_putorius.JH418006.1                               302783 0 -  14710649 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           7890 0 +     14753 C
e Mungos_mungo.MunMun_flattened_line_23663                   36398 7 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1750 0 +     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 142712 0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    27809 0 -    437263 C
e Mirza_zaza.k141_952172                                     10120 2 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         6994 0 -      8324 C
e Miopithecus_ogouensis.k141_534055                          10261 0 -     28506 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             35221 4 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1851541 4 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11261516 2 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                16920 3 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24533 7 -    145209 I
e Microcebus_murinus.CM007674.1                           18292577 2 -  93316391 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    4303 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12183210 6 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 33759 2 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365             11390 0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                        14405 2 -    207569 I
e Marmota_marmota.CZRN01000018.1                          33104292 0 -  40650429 C
e Manis_pentadactyla.KN006162.1                              51308 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              19322 0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 91694 2 +     94391 I
e Macaca_fascicularis.k141_814140                            81668 0 -    114318 C
e Lycaon_pictus.CM007581.1                                17956390 0 -  59628241 C
e Loxodonta_africana.GL010049.1                            4219623 0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             268686 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     7792 2 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044127 0 +   3914936 C
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525134 2 -  30322482 I
e Lasiurus_borealis.LasBor_scaffold_50988                    16204 96 +     29960 I
e Kogia_breviceps.KogBre_flattened_line_192630                2992 0 -      3359 C
e Jaculus_jaculus.JH725527.1                               8278168 2 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_48101               23635 0 +     23964 C
e Indri_indri.k141_3655594                                   23576 2 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7522005 0 -   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                      84100 0 +    135385 C
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  46084 0 +     55795 C
e Hipposideros_galeritus.HipGal_scaffold_29171               42995 2 +     43066 I
e Hipposideros_armiger.JXIK01000431.1                       111564 4 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3285 8 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20663215 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18873 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               243381 0 +    327341 C
e Hapalemur_occidentalis.k141_907772                         14619 2 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14782 2 -     41752 I
e Hapalemur_griseus.k141_1511508                             14681 2 +     18253 I
e Hapalemur_gilberti.k141_488810                             13042 2 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7889 2 -     19426 I
e Graphiurus_murinus.GraMur_scaffold_10447                   33660 0 +     78134 C
e Glis_glis.GliGli_scaffold_19807                            32063 0 +     49224 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609669 0 -    660261 C
e Galeopterus_variegatus.GalVar_scaffold_108840               2243 2 -      9135 I
e Galagoides_demidoff.k141_1711393                            2620 2 +     41679 I
e Fukomys_damarensis.KN121974.1                             851458 0 +   3816255 C
e Felis_nigripes.FelNig_flattened_line_20823                 10598 0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20196844 0 + 205367284 C
e Eulemur_sanfordi.k141_1122526                              14834 2 +    111500 I
e Eulemur_rufus.k141_1476633                                  5261 2 -     17153 I
e Eulemur_rubriventer.k141_774594                             1209 2 +     13026 I
e Eulemur_mongoz.k141_232305                                 11717 2 +     97555 I
e Eulemur_macaco.k141_1562045                                13787 2 +     75513 I
e Eulemur_fulvus.k141_544389                                 15025 2 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13790 2 +     26330 I
e Eulemur_coronatus.k141_885031                              16594 2 -     25546 I
e Eulemur_collaris.k141_377015                                7562 2 -     16928 I
e Eulemur_albifrons.k141_576796                              41181 2 -     44621 I
e Eubalaena_japonica.EubJap_flattened_line_31514             26031 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           12094 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3329292 0 -   7059049 C
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2146787 0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16330674 0 -  41312741 C
e Ellobius_talpinus.LOJH01081419.1                            1437 2 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          21531 2 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311705 0 +    607251 C
e Eidolon_helvum.KE759718.1                                  11601 2 +     11740 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    37406 0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8631170 0 +  20541912 C
e Delphinapterus_leucas.KZ290073.1                        16812420 0 +  35494412 C
e Daubentonia_madagascariensis.ctg71                      12538329 2 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64534 1 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  36920 0 +     51376 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    838120 0 +   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129             29542 0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_37019               3992 0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11668548 6 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 51073 2 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           1535 2 +     23735 I
e Condylura_cristata.JH655891.1                           17549103 0 -  53390261 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1253931 0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           17502 2 +     57038 I
e Cheirogaleus_major.k141_333249                             22131 2 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1517 1 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Cephalopachus_bancanus.k141_1423433                         6085 3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     94601 0 +    217609 C
e Castor_canadensis.CasCan_scaffold_2074                    138341 5 +    179628 I
e Carollia_perspicillata.CarPer_scaffold_92756                6173 0 -     11696 C
e Carlito_syrichta.NW_007259797.1                           156587 3 -    496798 I
e Capromys_pilorides.CapPil_scaffold_65020                    2054 0 -     12242 C
e Capra_hircus.CM004588.1                                 18061388 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18830668 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18501447 0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17960150 0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9035674 0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_27089                      979 0 -     43241 C
e CanFam4.chr16                                           17800231 0 -  60362399 C
e Camelus_ferus.KB017975.1                                  404073 0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2335774 0 -   7040546 C
e Camelus_bactrianus.KN276810.1                           10003298 0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2820040 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084372 11 +  45695690 I
e Bos_mutus.JH880303.1                                     1126290 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20273734 11 +  48749331 I
e Bison_bison.KN261452.1                                    200530 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    27472 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         3247 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15192782 0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              55384 2 +     85213 I
e Avahi_laniger.k141_765380                                  54753 2 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  5804 0 +     43469 C
e Arctocebus_calabarensis.k141_2318572                       12329 2 +     14667 I
e Aplodontia_rufa.AprRuf_scaffold_68852                      13664 0 +     20879 C
e Antilocapra_americana.AntAmePen_scaffold_12469             99031 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      186422 0 +    412891 C
e Ammotragus_lervia.NIVO01071767.1                          676550 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     75506 2 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             80721 0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9511644 2 -  29979442 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     71794 2 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           828359 0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       7890  7 +     62944 C--------TC----AA----T---C
s Acinonyx_jubatus.LLWD01001279.1                           828359  6 -   1699592 C--------T-----CA----A---C
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 6
s Acomys_cahirinus.AcoCah_scaffold_12655                     71796  6 +     87051 C--------T-----AA----A---C
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 2 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511646  6 -  29979442 C--------C-----CA----A---C
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 2 I 6
s Ailurus_fulgens.LNAC01001112.1                             80721  6 -    347723 c--------c-----ca----a---c
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 6
s Allactaga_bullata.AllBul_scaffold_9566                     75508  6 -     89534 C--------T-----CA----A---C
i Allactaga_bullata.AllBul_scaffold_9566                 I 2 C 0
s Allenopithecus_nigroviridis.k141_3361533                   15818  7 -     52922 C--------TC----AA----C---C
i Allenopithecus_nigroviridis.k141_3361533               I 2 C 0
s Allochrocebus_lhoesti.k141_4309873                         15738  7 -     28001 C--------TC----AA----C---C
i Allochrocebus_lhoesti.k141_4309873                     I 2 C 0
s Allochrocebus_preussi.k141_1442296                          6236  7 -     18505 C--------TC----AA----C---T
i Allochrocebus_preussi.k141_1442296                     I 2 C 0
s Allochrocebus_solatus.k141_166128                           7088  7 -     12518 C--------TC----AA----C---T
i Allochrocebus_solatus.k141_166128                      I 2 C 0
s Alouatta_belzebul.k141_3560514                              8661  5 +     51355 C--------TC----AA---------
i Alouatta_belzebul.k141_3560514                         I 2 C 0
s Alouatta_caraya.k141_1701091                                1770  5 -     36483 C--------TC----AA---------
i Alouatta_caraya.k141_1701091                           I 2 C 0
s Alouatta_discolor.k141_566626                              12222  5 +     28687 C--------TC----AA---------
i Alouatta_discolor.k141_566626                          I 2 C 0
s Alouatta_juara.k141_1302312                                  735  5 +     27940 C--------TC----AA---------
i Alouatta_juara.k141_1302312                            I 2 C 0
s Alouatta_macconnelli.k141_918386                            1779  5 -      9457 C--------TC----AA---------
i Alouatta_macconnelli.k141_918386                       I 2 C 0
s Alouatta_nigerrima.k141_1929159                              735  5 +     30492 C--------TC----AA---------
i Alouatta_nigerrima.k141_1929159                        I 2 C 0
s Alouatta_palliata.k141_2135620                              4730  5 +     47717 C--------TC----AA---------
i Alouatta_palliata.k141_2135620                         I 2 C 0
s Alouatta_puruensis.k141_362188                              1462  5 +      5663 C--------TC----AA---------
i Alouatta_puruensis.k141_362188                         I 2 C 0
s Alouatta_seniculus.k141_117119                             15914  5 +     50774 C--------TC----AA---------
i Alouatta_seniculus.k141_117119                         I 2 C 0
s Ammotragus_lervia.NIVO01071767.1                          676550  8 -   2318259 c--------t-----cc----act-g
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 3
s Anoura_caudifer.AnoCau_scaffold_1412                      186422  6 +    412891 c--------t-----ga----a---c
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 22
s Antilocapra_americana.AntAmePen_scaffold_12469             99031  8 -    100397 C--------T-----CA----ACG-A
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 I 3
s Aotus_azarae.k141_3104676                                  16900  7 -     33861 C--------TC----AA----C---C
i Aotus_azarae.k141_3104676                              I 2 C 0
s Aotus_griseimembra.k141_2240599                            16897  7 -     34016 C--------TC----AA----C---C
i Aotus_griseimembra.k141_2240599                        I 2 C 0
s Aotus_nancymaae.KZ198451.1                               4299324  7 -   5030052 C--------TC----AA----C---C
i Aotus_nancymaae.KZ198451.1                             I 2 C 0
s Aotus_trivirgatus.k141_2152450                             16933  7 -     34685 C--------TC----AA----C---C
i Aotus_trivirgatus.k141_2152450                         I 2 C 0
s Aotus_vociferans.k141_344750                               30058  7 -     47192 C--------TC----AA----C---C
i Aotus_vociferans.k141_344750                           I 2 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13664  2 +     20879 ---------------------C---C
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 8
s Arctocebus_calabarensis.k141_2318572                       12331  7 +     14667 T--------T-C---AT----C---A
i Arctocebus_calabarensis.k141_2318572                   I 2 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5804  6 +     43469 C--------T-----GA----A---C
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 3
s Avahi_laniger.k141_765380                                  54755  7 -     92717 C--------T-C---AA----C---A
i Avahi_laniger.k141_765380                              I 2 C 0
s Avahi_peyrierasi.k141_1424874                              55386  7 +     85213 C--------T-C---AA----C---A
i Avahi_peyrierasi.k141_1424874                          I 2 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15192782  8 +  23207421 C--------T-----CA----ATA-A
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 3
s Balaenoptera_bonaerensis.DF707048.1                         3247  8 -     18090 C--------T-----CA----ATA-A
i Balaenoptera_bonaerensis.DF707048.1                    C 0 I 3
s Beatragus_hunteri.BeaHun_scaffold_50177                    27472  8 +     34529 C--------T-----CC----ACT-G
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 3
s Bison_bison.KN261452.1                                    200530  8 -    288883 c--------t-----cg----act-a
i Bison_bison.KN261452.1                                 C 0 I 3
s Bos_indicus.CM003028.1                                  18363434  8 - 116941312 C--------T-----CC----ACT-A
i Bos_indicus.CM003028.1                                 I 28 I 57
s Bos_mutus.JH880303.1                                     1126290  8 -   1948126 c--------t-----cc----act-a
i Bos_mutus.JH880303.1                                   C 0 I 3
s Bos_taurus.CM000184.6                                   18200408  8 - 114055384 C--------T-----CC----ACT-A
i Bos_taurus.CM000184.6                                  I 28 I 57
s Bubalus_bubalis.KI419123.1                               2820040  8 +   4408762 c--------t-----cc----act-a
i Bubalus_bubalis.KI419123.1                             C 0 I 3
s Callibella_humilis.k141_1278103                             6777  7 -     10423 C--------TC----AA----C---C
i Callibella_humilis.k141_1278103                        I 4 C 0
s Callimico_goeldii.k141_737284                                321  6 -     31217 C--------TG----AA----T----
i Callimico_goeldii.k141_737284                          I 4 C 0
s Callithrix_geoffroyi.k119_69176                              616  7 +      5377 C--------TC----AA----C---C
i Callithrix_geoffroyi.k119_69176                        I 4 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592477  7 - 189096842 C--------TC----AA----C---C
i Callithrix_jacchus.pat_scaffold_3                      I 4 C 0
s Callithrix_kuhlii.k119_1168854                              1291  7 -     12329 C--------TC----AA----C---C
i Callithrix_kuhlii.k119_1168854                         I 4 C 0
s Camelus_bactrianus.KN276810.1                           10003298 10 -  17673402 C--------T-----TACAATA---A
i Camelus_bactrianus.KN276810.1                          C 0 I 3
s Camelus_dromedarius.KN272107.1                           2335774 10 -   7040546 C--------T-----TACAATA---A
i Camelus_dromedarius.KN272107.1                         C 0 I 3
s Camelus_ferus.KB017975.1                                  404073 10 -   1652518 C--------T-----TACAATA---A
i Camelus_ferus.KB017975.1                               C 0 I 3
s CanFam4.chr16                                           17800231  6 -  60362399 t--------c-----ta----a---c
i CanFam4.chr16                                          C 0 I 6
s Canis_lupus_VD.CanFam_VD_scaffold_27089                      979  6 -     43241 t--------c-----ta----a---c
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 I 6
s Canis_lupus_dingo.QKWQ01000480.1                         9035674  6 -   9314153 t--------c-----ta----a---c
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 6
s Canis_lupus_familiaris.chr16                            17960150  6 -  59632846 t--------c-----ta----a---c
i Canis_lupus_familiaris.chr16                           C 0 I 6
s Canis_lupus_orion.HG994398.1                            18501447  6 +  63665305 t--------c-----ta----a---c
i Canis_lupus_orion.HG994398.1                           C 0 I 6
s Capra_aegagrus.CM003241.1                               18830668  8 +  46296322 c--------t-----cc----act-g
i Capra_aegagrus.CM003241.1                              C 0 I 3
s Capra_hircus.CM004588.1                                 18061388  8 -  44709034 C--------T-----CC----ACT-G
i Capra_hircus.CM004588.1                                C 0 I 3
s Capromys_pilorides.CapPil_scaffold_65020                    2054  6 -     12242 C--------T-----CA----A---C
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6173  6 -     11696 C--------T-----GA----A---C
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 3
s Castor_canadensis.CasCan_scaffold_2074                    138346  6 +    179628 c--------t-----ca----a---c
i Castor_canadensis.CasCan_scaffold_2074                 I 5 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     94601  8 +    217609 C--------T-----CA----ACA-A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 3
s Cebuella_niveiventris.k141_1251222                         11217  7 -     11392 G--------TC----AA----C---C
i Cebuella_niveiventris.k141_1251222                     I 4 C 0
s Cebuella_pygmaea.k141_1309012                               7401  7 -      7577 C--------TC----AA----C---C
i Cebuella_pygmaea.k141_1309012                          I 4 C 0
s Cebus_albifrons.Contig27                                25653827  7 +  26074798 C--------TC----AC----C---C
i Cebus_albifrons.Contig27                               I 2 C 0
s Cebus_olivaceus.k141_1764483                                1765  7 +     28840 C--------TC----AC----C---C
i Cebus_olivaceus.k141_1764483                           I 2 C 0
s Cebus_unicolor.k141_1837183                                 1494  7 +     14051 C--------TC----AC----C---C
i Cebus_unicolor.k141_1837183                            I 2 C 0
s Cercocebus_atys.KQ010504.1                               4476755  7 +   4669795 C--------TC----AA----C---C
i Cercocebus_atys.KQ010504.1                             I 2 C 0
s Cercocebus_chrysogaster.k141_1540778                        1257  7 +     17872 C--------TC----AA----C---C
i Cercocebus_chrysogaster.k141_1540778                   I 2 C 0
s Cercocebus_lunulatus.k141_3342297                           1846  7 -     14043 C--------TC----AA----C---C
i Cercocebus_lunulatus.k141_3342297                      I 2 C 0
s Cercocebus_torquatus.k141_3057011                           9947  7 +     27781 C--------TC----AA----C---C
i Cercocebus_torquatus.k141_3057011                      I 2 C 0
s Cercopithecus_ascanius.k141_1024104                        10115  7 -     20310 C--------TC----AA----C---C
i Cercopithecus_ascanius.k141_1024104                    I 2 C 0
s Cercopithecus_cephus.k141_1078548                          13095  7 +     29689 C--------TC----AA----C---C
i Cercopithecus_cephus.k141_1078548                      I 2 C 0
s Cercopithecus_diana.k141_1150327                            7841  7 -     20078 C--------TC----AA----C---C
i Cercopithecus_diana.k141_1150327                       I 2 C 0
s Cercopithecus_hamlyni.k141_187466                          15763  7 -     27936 C--------TC----AA----C---T
i Cercopithecus_hamlyni.k141_187466                      I 2 C 0
s Cercopithecus_lowei.k141_1854285                            4629  7 -     17152 C--------TC----AA----C---C
i Cercopithecus_lowei.k141_1854285                       I 2 C 0
s Cercopithecus_albogularis.ctg5                                38818174  7 +  39242232 C--------TC----AA----C---C
i Cercopithecus_albogularis.ctg5                               I 2 C 0
s Cercopithecus_mona.ctg39                                21223863  7 -  21565898 C--------TC----AA----C---C
i Cercopithecus_mona.ctg39                               I 2 C 0
s Cercopithecus_neglectus.k141_2526306                       40982  7 -     53127 C--------TC----AA----C---C
i Cercopithecus_neglectus.k141_2526306                   I 2 C 0
s Cercopithecus_nictitans.k141_1119862                        1233  7 +     13442 C--------TC----AA----C---C
i Cercopithecus_nictitans.k141_1119862                   I 2 C 0
s Cercopithecus_petaurista.k141_807961                       15782  7 -     27947 C--------TC----AA----C---C
i Cercopithecus_petaurista.k141_807961                   I 2 C 0
s Cercopithecus_pogonias.k141_822820                         15758  7 +     17596 C--------TC----AA----C---C
i Cercopithecus_pogonias.k141_822820                     I 2 C 0
s Cercopithecus_roloway.k141_2581234                          1801  7 +     14005 C--------TC----AA----C---C
i Cercopithecus_roloway.k141_2581234                     I 2 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1518  6 -      8501 C--------T-----CA----G---T
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       I 1 I 3
s Cheirogaleus_major.k141_333249                             22133  9 -     52598 C--------T-CAACAA----C----
i Cheirogaleus_major.k141_333249                         I 2 I 1800
s Cheirogaleus_medius.k141_1055463                           17504  9 +     57038 C--------T-CAACAA----C----
i Cheirogaleus_medius.k141_1055463                       I 2 I 1794
s Chinchilla_lanigera.JH722012.1                           1253931  6 +   2543920 C--------T-----CA----A---C
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2206961                           2101  7 -     15524 C--------TC----AA----C---C
i Chiropotes_albinasus.k141_2206961                      I 2 C 0
s Chlorocebus_aethiops.ctg25                              18429740  7 -  18827391 C--------TC----AA----C---C
i Chlorocebus_aethiops.ctg25                             I 2 C 0
s Chlorocebus_pygerythrus.k141_1025673                       16176  7 -     50209 C--------TC----AA----C---C
i Chlorocebus_pygerythrus.k141_1025673                   I 2 C 0
s Chlorocebus_sabaeus.CM001947.1                         135423177  7 + 135778131 C--------TC----AA----C---C
i Chlorocebus_sabaeus.CM001947.1                         I 2 C 0
s Colobus_angolensis.KN981557.1                            1911655  7 +   2368649 C--------TC----AA----C---C
i Colobus_angolensis.KN981557.1                          I 2 C 0
s Colobus_guereza.LG01                                   199949907  7 + 200372422 C--------TC----AA----C---C
i Colobus_guereza.LG01                                   I 2 C 0
s Colobus_polykomos.k141_906115                              38189  7 +     84244 C--------TC----AA----C---C
i Colobus_polykomos.k141_906115                          I 2 C 0
s Condylura_cristata.JH655891.1                           17549103  9 -  53390261 C--------C-CCA-AA----A---C
i Condylura_cristata.JH655891.1                          C 0 I 2
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1537  9 +     23735 C--------T-CAA-TA----A---C
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      I 2 I 3
s Cricetomys_gambianus.CriGam_scaffold_18520                 51075  6 +     63868 C--------T-----AA----A---C
i Cricetomys_gambianus.CriGam_scaffold_18520             I 2 C 0
s Cricetulus_griseus.LT883664.1                           11668554  6 + 224834208 C--------T-----AA----A---C
i Cricetulus_griseus.LT883664.1                          I 6 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               3992  5 -     19598 ---------T-----CA----A---C
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 I 3
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29542  6 -     87169 C--------T-----CA----A---C
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 6
s Ctenodactylus_gundi.CteGun_scaffold_65                    838120  6 +   1526836 C--------C-----CA----A---T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  36920  6 +     51376 C--------T-----CA----A---T
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            64535  6 +   2246927 C--------A-----TT----G---T
i Dasypus_novemcinctus.JH564415.1                        I 1 I 3
s Daubentonia_madagascariensis.ctg71                      12538331  7 -  12879189 C--------T-C---AA----C---C
i Daubentonia_madagascariensis.ctg71                     I 2 C 0
s Delphinapterus_leucas.KZ290073.1                        16812420  8 +  35494412 c--------t-----ca----g-taa
i Delphinapterus_leucas.KZ290073.1                       C 0 I 3
s Desmodus_rotundus.KZ672289.1                             8631170  6 +  20541912 C--------T-----GG----A---C
i Desmodus_rotundus.KZ672289.1                           C 0 I 3
s Dinomys_branickii.DinBra_scaffold_21862                    37406  6 +     67921 T--------T-----CA----A---C
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Echinops_telfairi.JH980293.1                            48781826 14 + 111700974 CGTCTGTGTT-----CA----A---C
i Echinops_telfairi.JH980293.1                           I 7 I 6
s Eidolon_helvum.KE759718.1                                  11603  9 +     11740 c--------t--caata----a---t
i Eidolon_helvum.KE759718.1                              I 2 I 3
s Elaphurus_davidianus.JRFZ01104969.1                       311705  7 +    607251 C--------T------A----ATG-A
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 3
s Ellobius_lutescens.LOEQ01008920.1                          21533  6 -    110024 C--------T-----AA----A---C
i Ellobius_lutescens.LOEQ01008920.1                      I 2 C 0
s Ellobius_talpinus.LOJH01081419.1                            1439  6 +      8657 C--------T-----AA----A---C
i Ellobius_talpinus.LOJH01081419.1                       I 2 C 0
s Enhydra_lutris.KZ291758.1                               16330674  6 -  41312741 C--------C-----CA----A---C
i Enhydra_lutris.KZ291758.1                              C 0 I 6
s Eptesicus_fuscus.JH977646.1                              2146787  6 -  14770903 C--------T-----GA----A---C
i Eptesicus_fuscus.JH977646.1                            C 0 I 3
s Erythrocebus_patas.Contig38                             21206345  7 -  21539334 C--------TC----AA----C---T
i Erythrocebus_patas.Contig38                            I 2 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12094  8 +    133382 c--------t-----ca----a-taa
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 3
s Eubalaena_japonica.EubJap_flattened_line_31514             26031  8 -     44125 C--------T-----CA----ATA-A
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 I 3
s Eulemur_albifrons.k141_576796                              41183  7 -     44621 C--------T-C---AA----C---A
i Eulemur_albifrons.k141_576796                          I 2 C 0
s Eulemur_collaris.k141_377015                                7564  7 -     16928 C--------T-C---AA----C---A
i Eulemur_collaris.k141_377015                           I 2 C 0
s Eulemur_coronatus.k141_885031                              16596  7 -     25546 C--------T-C---AA----C---A
i Eulemur_coronatus.k141_885031                          I 2 C 0
s Eulemur_flavifrons.k141_1184614                            13792  7 +     26330 C--------T-C---AA----C---A
i Eulemur_flavifrons.k141_1184614                        I 2 C 0
s Eulemur_fulvus.k141_544389                                 15027  7 +     23973 C--------T-C---AA----C---A
i Eulemur_fulvus.k141_544389                             I 2 C 0
s Eulemur_macaco.k141_1562045                                13789  7 +     75513 C--------T-C---AA----C---A
i Eulemur_macaco.k141_1562045                            I 2 C 0
s Eulemur_mongoz.k141_232305                                 11719  7 +     97555 C--------T-C---AA----C---A
i Eulemur_mongoz.k141_232305                             I 2 C 0
s Eulemur_rubriventer.k141_774594                             1211  7 +     13026 C--------T-C---AA----C---A
i Eulemur_rubriventer.k141_774594                        I 2 C 0
s Eulemur_rufus.k141_1476633                                  5263  7 -     17153 C--------T-C---AA----C---A
i Eulemur_rufus.k141_1476633                             I 2 C 0
s Eulemur_sanfordi.k141_1122526                              14836  7 +    111500 C--------T-C---AA----C---A
i Eulemur_sanfordi.k141_1122526                          I 2 C 0
s Felis_catus.CM001381.2                                  20238001  6 + 206538554 C--------T-----CA----A---C
i Felis_catus.CM001381.2                                 C 0 I 6
s Felis_catus_fca126.CM031415.1                           20196844  6 + 205367284 C--------T-----CA----A---C
i Felis_catus_fca126.CM031415.1                          C 0 I 6
s Felis_nigripes.FelNig_flattened_line_20823                 10598  6 -     36744 C--------T-----CA----A---C
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 6
s Fukomys_damarensis.KN121974.1                             851458  1 +   3816255 C-------------------------
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg2040                                     427634  7 -    453645 T--------T-C---AT----C---A
i Galago_moholi.ctg2040                                  I 2 C 0
s Galago_senegalensis.k141_631886                             5324  7 +     11339 T--------T-C---AT----C---A
i Galago_senegalensis.k141_631886                        I 2 C 0
s Galagoides_demidoff.k141_1711393                            2622  7 +     41679 T--------T-C---AT----C---A
i Galagoides_demidoff.k141_1711393                       I 2 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               2245  6 -      9135 c--------t-----ca----a---t
i Galeopterus_variegatus.GalVar_scaffold_108840          I 2 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     609669  8 -    660261 C--------T-----CA----ACG-A
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 I 3
s Gorilla_beringei.k141_3596273                              17147  7 -     32273 C--------TC----AA----T---T
i Gorilla_beringei.k141_3596273                          I 2 C 0
s Gorilla_gorilla.LT578341.1                             186339282  7 + 186649187 C--------TC----AA----T---T
i Gorilla_gorilla.LT578341.1                             I 2 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33660  2 +     78134 ---------------------C---T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           7891  7 -     19426 C--------T-C---AA----C---A
i Hapalemur_alaotrensis.k141_170648                      I 2 C 0
s Hapalemur_gilberti.k141_488810                             13044  7 -     15286 C--------T-C---AA----C---A
i Hapalemur_gilberti.k141_488810                         I 2 C 0
s Hapalemur_griseus.k141_1511508                             14683  7 +     18253 C--------T-C---AA----C---A
i Hapalemur_griseus.k141_1511508                         I 2 C 0
s Hapalemur_meridionalis.k141_248335                         14784  7 -     41752 C--------T-C---AA----C---A
i Hapalemur_meridionalis.k141_248335                     I 2 C 0
s Hapalemur_occidentalis.k141_907772                         14621  7 -     16460 C--------T-C---AA----C---A
i Hapalemur_occidentalis.k141_907772                     I 2 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243381  6 +    327341 C--------T-----CA----A---C
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 6
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18873  8 +     36099 C--------T-----CC----ACT-G
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 I 3
s Heterocephalus_glaber.JH602082.1                        20663215  6 +  22651954 C--------T-----CA----A---C
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                3293  6 +      7595 C--------T-----CA----G---C
i Heterohyrax_brucei.HetBruBak_scaffold_122365           I 8 I 24
s Hipposideros_armiger.JXIK01000431.1                       111568  4 +   1711038 ---------------TA----A---C
i Hipposideros_armiger.JXIK01000431.1                    I 4 I 3
s Hipposideros_galeritus.HipGal_scaffold_29171               42997  9 +     43066 C--------T-CAA-TA----A---C
i Hipposideros_galeritus.HipGal_scaffold_29171           I 2 I 3
s Hoolock_leuconedys.ctg274                                    435948  7 +    630532 C--------TC----AA----T---C
i Hoolock_leuconedys.ctg274                                 I 2 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46084  6 +     55795 C--------T-----CA----A---C
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 6
s Hystrix_cristata.HysCri_scaffold_5660                      84100  4 +    135385 ---------------CA----A---C
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7522005  2 -   7955117 ---------------------C---T
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   23578  7 +     31101 C--------T-C---AA----C---A
i Indri_indri.k141_3655594                               I 2 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               23635  8 +     23964 C--------T-----CA----ATA-A
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 I 3
s Jaculus_jaculus.JH725527.1                               8278170  6 -   9596543 C--------T-----CA----A---C
i Jaculus_jaculus.JH725527.1                             I 2 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                2992  8 -      3359 C--------T-----CA----ATA-A
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 I 3
s Lasiurus_borealis.LasBor_scaffold_32767                    17443  6 -     42476 C--------T-----GA----A---C
i Lasiurus_borealis.LasBor_scaffold_32767                I 24 I 3
s Lemur_catta.scaffold_24                                 15525136  7 -  30322482 C--------T-C---AA----C---A
i Lemur_catta.scaffold_24                                I 2 C 0
s Leontocebus_fuscicollis.k141_1820339                        9056  7 +     64341 C--------TC----AA----C---C
i Leontocebus_fuscicollis.k141_1820339                   I 4 C 0
s Leontocebus_illigeri.k141_1304848                           1396  7 -     35062 C--------TC----AA----C---C
i Leontocebus_illigeri.k141_1304848                      I 4 C 0
s Leontocebus_nigricollis.k141_4610752                        9083  7 +     35603 C--------TC----AA----C---C
i Leontocebus_nigricollis.k141_4610752                   I 4 C 0
s Leontopithecus_chrysomelas.k141_1519602                    30696  7 +     38576 C--------TC----AA----C---C
i Leontopithecus_chrysomelas.k141_1519602                I 4 C 0
s Leontopithecus_rosalia.k141_464620                         27400  7 +     66356 C--------TC----AA----C---C
i Leontopithecus_rosalia.k141_464620                     I 4 C 0
s Leptonychotes_weddellii.KB714746.1                       3044127  6 +   3914936 c--------t-----ca----a---c
i Leptonychotes_weddellii.KB714746.1                     C 0 I 6
s Lepus_americanus.LepAme_scaffold_107385                     7794  6 -     14121 C--------T-----CA----A---C
i Lepus_americanus.LepAme_scaffold_107385                I 2 C 0
s Lipotes_vexillifer.KE559953.1                             268686  8 -    662738 c--------t-----ca----a-taa
i Lipotes_vexillifer.KE559953.1                          C 0 I 3
s Lophocebus_aterrimus.ctg367                              1438298  7 +   1826925 C--------TC----AA----C---C
i Lophocebus_aterrimus.ctg367                            I 2 C 0
s Loris_lydekkerianus.k141_399337                            16000  7 -     33856 T--------T-C---AT----C---A
i Loris_lydekkerianus.k141_399337                        I 2 C 0
s Loris_tardigradus.ctg83                                  1013711  7 +   6120653 T--------T-C---AT----C---A
i Loris_tardigradus.ctg83                                I 2 C 0
s Loxodonta_africana.GL010049.1                            4219623  6 -  43346337 C--------T-----TA----G---C
i Loxodonta_africana.GL010049.1                          C 0 I 6
s Lycaon_pictus.CM007581.1                                17956390  6 -  59628241 c--------c-----ta----a---c
i Lycaon_pictus.CM007581.1                               C 0 I 6
s Macaca_arctoides.k141_2326796                               8113  7 +     40492 C--------TC----AA----C---C
i Macaca_arctoides.k141_2326796                          I 2 C 0
s Macaca_assamensis.Contig5                               59677372  7 +  60120075 C--------TC----AA----C---C
i Macaca_assamensis.Contig5                              I 2 C 0
s Macaca_cyclopis.k119_18836                                 13888  7 -     26193 C--------TC----AA----C---C
i Macaca_cyclopis.k119_18836                             I 2 C 0
s Macaca_fascicularis.k141_814140                            81668  7 -    114318 C--------TC----AA----C---C
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  7359  7 -     23192 C--------TC----AA----C---C
i Macaca_fuscata.k119_255327                             I 2 C 0
s Macaca_leonina.k141_3550399                                16821  7 -     29190 C--------TC----AA----C---C
i Macaca_leonina.k141_3550399                            I 2 C 0
s Macaca_maura.k141_2733130                                  25397  7 +     37952 C--------TC----AA----C---C
i Macaca_maura.k141_2733130                              I 2 C 0
s Macaca_mulatta.NC_041758.1                             186840486  7 + 187317192 C--------TC----AA----C---C
i Macaca_mulatta.NC_041758.1                             I 2 C 0
s Macaca_nemestrina.KQ007038.1                            25459038  7 -  25927173 C--------TC----AA----C---C
i Macaca_nemestrina.KQ007038.1                           I 2 C 0
s Macaca_nigra.k141_1655396                                  81245  7 +     89720 C--------TC----AA----C---C
i Macaca_nigra.k141_1655396                              I 2 C 0
s Macaca_radiata.k141_3680011                                 8246  7 +     20474 C--------TC----AA----C---C
i Macaca_radiata.k141_3680011                            I 2 C 0
s Macaca_siberu.k141_635500                                   8035  7 -     14993 C--------TC----AA----C---C
i Macaca_siberu.k141_635500                              I 2 C 0
s Macaca_silenus.Contig273                                  330901  7 -    668171 C--------TC----AA----C---C
i Macaca_silenus.Contig273                               I 2 C 0
s Macaca_thibetana.k99_256239                                 6359  7 -     24072 C--------TC----AA----C---C
i Macaca_thibetana.k99_256239                            I 2 C 0
s Macaca_tonkeana.k141_1498238                               26984  7 -     45290 C--------TC----AA----C---C
i Macaca_tonkeana.k141_1498238                           I 2 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91696  9 +     94391 c--------t--caata----a---c
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 2 I 3
s Mandrillus_leucophaeus.scaffold280                      23938575  7 -  24302211 C--------TC----AA----C---C
i Mandrillus_leucophaeus.scaffold280                     I 2 C 0
s Mandrillus_sphinx.Contig270                               352697  7 +    752769 C--------TC----AA----C---C
i Mandrillus_sphinx.Contig270                            I 2 C 0
s Manis_javanica.JSZB01003497.1                              19322  6 +    737560 C--------T-----CA----A---C
i Manis_javanica.JSZB01003497.1                          C 0 I 6
s Manis_pentadactyla.KN006162.1                              51308  6 -    317179 C--------T-----CA----A---C
i Manis_pentadactyla.KN006162.1                          C 0 I 6
s Marmota_marmota.CZRN01000018.1                          33104292  2 -  40650429 ---------------------C---T
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        14407  9 -    207569 C--------T-CA-GTA----A---C
i Megaderma_lyra.MegLyr_scaffold_4542                    I 2 I 21
s Mellivora_capensis.MelCap_flattened_line_69365             11390  6 +     13704 C--------C-----CA----A---C
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 6
s Meriones_unguiculatus.MerUng_scaffold_7390                 33761  6 +    140813 C--------T-----AA----A---C
i Meriones_unguiculatus.MerUng_scaffold_7390             I 2 C 0
s Mesocricetus_auratus.KB708134.1                         12183216  6 -  29670104 C--------T-----AA----A---C
i Mesocricetus_auratus.KB708134.1                        I 6 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    4303  8 +     10310 C--------T-----CA----GTA-A
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 I 3
s Mico_argentatus.k141_1239457                                7213  7 -      7380 C--------TC----AA----C---C
i Mico_argentatus.k141_1239457                           I 4 C 0
s Mico_schneideri.k141_1950671                                      7186  7 -      7356 C--------TC----AA----C---C
i Mico_schneideri.k141_1950671                                 I 4 C 0
s Microcebus_murinus.CM007674.1                           18292579  9 -  93316391 C--------T-CCACAA----C----
i Microcebus_murinus.CM007674.1                          I 2 I 1971
s Microgale_talazaci.MicTal_scaffold_6613                    24540 12 -    145209 CAT--GTGTT-----CA----A---C
i Microgale_talazaci.MicTal_scaffold_6613                I 7 I 6
s Micronycteris_hirsuta.MicHir_scaffold_52381                16923  6 -     19307 C--------G-----GA----A---C
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 3 I 3
s Microtus_ochrogaster.CM001695.1                         11261518  6 -  27267610 A--------T-----AA----A---C
i Microtus_ochrogaster.CM001695.1                        I 2 C 0
s Miopithecus_ogouensis.k141_534055                          10261  7 -     28506 C--------TC----AA----C---C
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         6994  6 -      8324 C--------T-----CA----A---C
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 6
s Mirza_zaza.k141_952172                                     10122  9 -     37649 C--------T-CCAAAA----C----
i Mirza_zaza.k141_952172                                 I 2 I 1990
s Monodon_monoceros.MonMon_M_scaffold_103                    27809  8 -    437263 c--------t-----ca----a-taa
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 3
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142712  6 -    366855 C--------T-----GA----A---C
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 3
s Moschus_moschiferus.MosMos_scaffold_13123                   1750  8 +     82753 c--------t-----cc----act-g
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 3
s Murina_feae.MurFea_scaffold_85699                           7890  6 +     14753 C--------T-----GA----A---C
i Murina_feae.MurFea_scaffold_85699                      C 0 I 3
s Mus_caroli.LT608237.1                                   84362377  6 - 120012414 C--------T-----AA----A---C
i Mus_caroli.LT608237.1                                  I 2 C 0
s Mus_musculus.chr8                                       87651370  6 - 129401213 C--------T-----AA----A---C
i Mus_musculus.chr8                                      I 2 C 0
s Mus_pahari.LT608297.1                                   31356024  6 -  89631738 C--------T-----AA----A---C
i Mus_pahari.LT608297.1                                  I 2 C 0
s Mus_spretus.CM004101.1                                  90753433  6 - 130317789 C--------T-----AA----A---C
i Mus_spretus.CM004101.1                                 I 2 C 0
s Mustela_putorius.JH418006.1                               302783  6 -  14710649 C--------C-----CA----A---C
i Mustela_putorius.JH418006.1                            C 0 I 6
s Myocastor_coypus.MyoCoy_scaffold_10123                     72236  6 -     80779 C--------T-----CA----A---C
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                281532  6 -  10118263 C--------T-----GA----A---C
i Myotis_brandtii.KE162005.1                             C 0 I 3
s Myotis_davidii.KB100139.1                                1588787  6 -   6019432 C--------T-----GA----A---C
i Myotis_davidii.KB100139.1                              C 0 I 3
s Myotis_lucifugus.GL429869.1                              3904884  6 -   4330536 C--------T-----GA----A---C
i Myotis_lucifugus.GL429869.1                            C 0 I 3
s Myotis_myotis.MyoMyo_scaffold_281845                        1035  6 +      1835 C--------T-----GA----A---C
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 I 3
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190301  6 +    196477 C--------T-----CA----G---C
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 1 I 3
s Nannospalax_galili.KL204047.1                            2035587  6 -   3037898 C--------C-----CA----G---A
i Nannospalax_galili.KL204047.1                          I 2 C 0
s Nasalis_larvatus.k141_413338                               16282  7 +     21681 C--------TC----AA----C---C
i Nasalis_larvatus.k141_413338                           I 2 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308587  6 +  31847680 c--------t-----ca----a---c
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 6
s Neophocaena_asiaeorientalis.KZ687982.1                   5866766  8 +   7148211 c--------t-----ca----a-taa
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 3
s Noctilio_leporinus.NocLep_scaffold_251                    758918  2 +    783361 ---------------------A---C
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 3
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150453  6 -   9404916 c--------c-----ta----a---c
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 6
s Nycticebus_bengalensis.LG01                            102587240  7 - 196305487 T--------T-C---AT----C---A
i Nycticebus_bengalensis.LG01                            I 2 C 0
s Nycticebus_coucang.k141_1127096                             1164  7 +      2075 T--------T-C---AT----C---A
i Nycticebus_coucang.k141_1127096                        I 2 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105762595  7 + 199412804 T--------T-C---AT----C---A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 2 C 0
s Ochotona_princeps.JH802162.1                             1365247  6 +   3988456 G--------T-----CA----A---T
i Ochotona_princeps.JH802162.1                           I 2 C 0
s Odobenus_rosmarus.KB229312.1                              507732  6 -   2017862 c--------c-----ca----a---c
i Odobenus_rosmarus.KB229312.1                           C 0 I 6
s Okapia_johnstoni.LVCL01S0005463.1                          77582  8 -    150152 C--------T-----CA----ACG-A
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 3
s Ondatra_zibethicus.OndZib_scaffold_46174                   26167  6 +     28053 C--------T-----AA----A---C
i Ondatra_zibethicus.OndZib_scaffold_46174               I 2 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    81204  6 +    102263 C--------T-----AA----A---C
i Onychomys_torridus.OnyTor_scaffold_2986                I 2 C 0
s Orcinus_orca.KB316932.1                                  2782689  8 -  10937097 C--------T-----CA----ATA-A
i Orcinus_orca.KB316932.1                                C 0 I 3
s Orycteropus_afer.OryAfe_flattened_line_144387              12227  6 -     18566 C--------T-----AA----A---C
i Orycteropus_afer.OryAfe_flattened_line_144387          C 0 I 6
s Oryctolagus_cuniculus.CM000791.1                        67148695  6 + 174332312 C--------T-----CA----A---C
i Oryctolagus_cuniculus.CM000791.1                       I 2 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       463402  6 -    559221 c--------c-----ta----a---c
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 6
s Otolemur_crassicaudatus.k141_222918                         5149  7 +      8798 T--------T-C---AT----C---A
i Otolemur_crassicaudatus.k141_222918                    I 2 C 0
s Otolemur_garnettii.GL873799.1                             697311  7 -   1103335 T--------T-C---AT----T---A
i Otolemur_garnettii.GL873799.1                          I 2 C 0
s Ovis_aries.CM001607.2                                   17586848  8 +  44047080 c--------t-----cc----act-g
i Ovis_aries.CM001607.2                                  C 0 I 3
s Ovis_canadensis.OviCan_scaffold_2572                      174825  8 -    191736 c--------t-----cc----act-g
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 I 3
s Pan_paniscus.KQ411613.1                                    45233  7 +     80009 C--------TC----AA----T---C
i Pan_paniscus.KQ411613.1                                I 2 C 0
s Pan_troglodytes.CM009242.2                             189144133  7 + 189151597 C--------TC----AA----T---C
i Pan_troglodytes.CM009242.2                             I 2 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152206  6 +    230217 C--------T-----CA----A---C
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 6
s Panthera_pardus.KV860321.1                                265415  6 +  18783137 C--------T-----CA----A---C
i Panthera_pardus.KV860321.1                             C 0 I 6
s Panthera_tigris.KE722367.1                               4722295  6 -   8748460 C--------T-----CA----A---C
i Panthera_tigris.KE722367.1                             C 0 I 6
s Pantholops_hodgsonii.KE114653.1                          1265743  8 -   2937107 c--------t-----cc----act-g
i Pantholops_hodgsonii.KE114653.1                        C 0 I 3
s Papio_anubis.CM001495.2                                183444375  7 + 183742232 C--------TC----AA----C---C
i Papio_anubis.CM001495.2                                I 2 C 0
s Papio_cynocephalus.k141_4307930                             8021  7 +     20448 C--------TC----AA----C---C
i Papio_cynocephalus.k141_4307930                        I 2 C 0
s Papio_hamadryas.Contig39                                20564833  7 +  20919399 C--------TC----AA----C---C
i Papio_hamadryas.Contig39                               I 2 C 0
s Papio_kindae.k141_1936966                                   6765  7 +     41871 C--------TC----AA----C---C
i Papio_kindae.k141_1936966                              I 2 C 0
s Papio_papio.k141_802527                                    10058  7 +     27711 C--------TC----AA----C---C
i Papio_papio.k141_802527                                I 2 C 0
s Papio_ursinus.k141_5274964                                  1055  7 -     11374 C--------TC----AA----C---C
i Papio_ursinus.k141_5274964                             I 2 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13701  6 -     78924 A--------T-----GG----T---G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 6
s Perodicticus_ibeanus.k141_855320                           11140  7 +     13100 T--------T-C---AT----C---A
i Perodicticus_ibeanus.k141_855320                       I 2 C 0
s Perodicticus_potto.k141_1092580                             9534  7 +     25941 T--------T-C---AT----C---A
i Perodicticus_potto.k141_1092580                        I 2 C 0
s Peromyscus_maniculatus.KI615324.1                       18195783  6 -  18517816 C--------T-----AA----A---C
i Peromyscus_maniculatus.KI615324.1                      I 2 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     29135  6 -     29689 C--------C-----AA----A---C
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               9728  8 +     63832 t--------t-----ca----a-taa
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 3
s Piliocolobus_badius.k141_1234363                           44774  7 +     62158 C--------TC----AA----C---C
i Piliocolobus_badius.k141_1234363                       I 2 C 0
s Piliocolobus_gordonorum.k141_381342                        39521  7 +     89929 C--------TC----AA----C---C
i Piliocolobus_gordonorum.k141_381342                    I 2 C 0
s Piliocolobus_kirkii.k141_448987                            40937  7 +     51399 C--------TC----AA----C---C
i Piliocolobus_kirkii.k141_448987                        I 2 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14297178  7 -  14605196 c--------tc----aa----c---C
i Piliocolobus_tephrosceles.PDMG02000141.1               I 2 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2824  6 +     22620 C--------T-----GA----A---C
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 3
s Platanista_gangetica.PlaMin_flattened_line_32310           35429  8 +     35617 C--------C-----CA----ATA-A
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 I 3
s Pongo_abelii.CM009266.2                                189132278  7 + 189387572 C--------TC----AA----C---C
i Pongo_abelii.CM009266.2                                I 2 C 0
s Pongo_pygmaeus.ctg66                                     9571885  7 +   9816681 C--------TC----AA----C---C
i Pongo_pygmaeus.ctg66                                   I 2 C 0
s Presbytis_comata.k141_677006                               74457  7 -     81375 C--------TC----AG----C---C
i Presbytis_comata.k141_677006                           I 2 C 0
s Presbytis_mitrata.k141_1087752                              6278  7 +     19060 C--------TC----AG----C---C
i Presbytis_mitrata.k141_1087752                         I 2 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 15746  6 -     22811 C--------T-----CA----G---C
i Procavia_capensis.ProCapCap_scaffold_85530             I 8 I 24
s Prolemur_simus.MPIZ01000396.1                            2597816  7 -   4620579 C--------T-C---AA----C---A
i Prolemur_simus.MPIZ01000396.1                          I 2 C 0
s Propithecus_coquerelli.NW_012148875.1                     991799  2 +   2598838 C--------T----------------
i Propithecus_coquerelli.NW_012148875.1                  I 2 I 2
s Propithecus_coronatus.k141_347390                          30111  2 +     38485 C--------T----------------
i Propithecus_coronatus.k141_347390                      I 2 I 2
s Propithecus_diadema.k141_58108                              2153  2 -     13098 C--------T----------------
i Propithecus_diadema.k141_58108                         I 2 I 2
s Propithecus_edwardsi.k141_1176054                          27632  2 +     35766 C--------T----------------
i Propithecus_edwardsi.k141_1176054                      I 2 I 2
s Propithecus_perrieri.k141_1200571                           5819  2 -     24134 C--------T----------------
i Propithecus_perrieri.k141_1200571                      I 2 I 2
s Propithecus_tattersalli.k141_790011                        29644  2 -     67325 C--------T----------------
i Propithecus_tattersalli.k141_790011                    I 2 I 2
s Propithecus_verreauxi.k141_956661                           5867  2 -      6182 C--------T----------------
i Propithecus_verreauxi.k141_956661                      I 2 I 2
s Psammomys_obesus.NESX01036370.1                            11407  6 -     21651 C--------T-----AA----A---C
i Psammomys_obesus.NESX01036370.1                        I 2 C 0
s Pteronotus_parnellii.KE909381.1                            16207  6 -     21811 C--------T-----GC----C---C
i Pteronotus_parnellii.KE909381.1                        C 0 I 3
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41590  6 +     42204 C--------C-----CA----G---C
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 6
s Pteropus_alecto.KB030862.1                              22977837  9 +  28871421 c--------t--caata----a---c
i Pteropus_alecto.KB030862.1                             I 2 I 3
s Pteropus_vampyrus.KN534172.1                                7890  9 -      8028 c--------t--caata----a---c
i Pteropus_vampyrus.KN534172.1                           I 2 I 3
s Puma_concolor.QAVW01001104.1                            20275367  6 -  38429054 C--------T-----CA----A---C
i Puma_concolor.QAVW01001104.1                           C 0 I 6
s Pygathrix_cinerea.k141_1153803                             16264  7 -     91421 C--------TC----AA----C---C
i Pygathrix_cinerea.k141_1153803                         I 2 C 0
s Pygathrix_nigripes_b.ctg100                                 7610384  7 +   7812017 C--------TC----AA----C---C
i Pygathrix_nigripes_b.ctg100                               I 2 C 0
s Pygathrix_nigripes_a.k141_215492                             16263  7 -     72585 C--------TC----AA----C---C
i Pygathrix_nigripes_a.k141_215492                         I 2 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6325  7 +     55207 C--------T------A----ATG-A
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 3
s Rhinolophus_sinicus.LVEH01000134.1                        368053  9 -   3329780 c--------c--caata----a---c
i Rhinolophus_sinicus.LVEH01000134.1                     I 2 I 3
s Rhinopithecus_bieti.k119_217274                             7974  7 -     11128 C--------TC----AA----C---C
i Rhinopithecus_bieti.k119_217274                        I 2 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91237323  7 - 195417433 C--------TC----AA----C---C
i Rhinopithecus_roxellana.NC_044550.1                    I 2 C 0
s Rhinopithecus_strykeri.ctg102                            7672979  7 +   7961872 C--------TC----AA----C---C
i Rhinopithecus_strykeri.ctg102                          I 2 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88879  9 -     96226 c--------t--caata----a---c
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 2 I 3
s Saguinus_bicolor.k141_8081                                  2366  7 +     42994 C--------TC----AA----C---C
i Saguinus_bicolor.k141_8081                             I 4 C 0
s Saguinus_imperator.k141_1496743                             1065  7 +      2253 C--------TC----AA----C---C
i Saguinus_imperator.k141_1496743                        I 4 C 0
s Saguinus_inustus.k141_3945547                               1494  7 -      8737 C--------TC----AA----C---C
i Saguinus_inustus.k141_3945547                          I 4 C 0
s Saguinus_labiatus.k141_4004060                              1147  7 +      2343 C--------TC----AA----C---C
i Saguinus_labiatus.k141_4004060                         I 4 C 0
s Saguinus_midas.LG03                                    209476024  7 + 209938924 C--------TC----AA----C---C
i Saguinus_midas.LG03                                    I 4 C 0
s Saguinus_mystax.k141_4699220                                 470  7 -      7576 C--------TC----AA----C---C
i Saguinus_mystax.k141_4699220                           I 4 C 0
s Saimiri_boliviensis.NW_024100920.1                     119952102  7 - 121099817 C--------TC----AA----C---C
i Saimiri_boliviensis.NW_024100920.1                     I 2 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24444  7 +     46362 C--------TC----AA----C---C
i Saimiri_cassiquiarensis.k141_2188234                   I 2 C 0
s Saimiri_macrodon.k141_716185                               24539  7 +     45824 C--------TC----AA----C---C
i Saimiri_macrodon.k141_716185                           I 2 C 0
s Saimiri_oerstedii.k141_1487881                             41218  7 -     64574 C--------TC----AA----C---C
i Saimiri_oerstedii.k141_1487881                         I 2 C 0
s Saimiri_sciureus.k141_2278166                               4291  7 -     23631 C--------TC----AA----C---C
i Saimiri_sciureus.k141_2278166                          I 2 C 0
s Saimiri_ustus.k141_1484609                                 24435  7 -     61129 C--------TC----AA----C---C
i Saimiri_ustus.k141_1484609                             I 2 C 0
s Sapajus_apella.ctg103                                    5421781  7 -   5703754 C--------TC----AC----C---C
i Sapajus_apella.ctg103                                  I 2 C 0
s Sapajus_macrocephalus.k141_351809                          57022  7 -     80660 C--------TC----AC----C---C
i Sapajus_macrocephalus.k141_351809                      I 2 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154257  9 -    313613 C--------C-CCA-CA----A---C
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 2 I 3
s Semnopithecus_entellus.k141_1672505                         1155  7 -     12572 C--------TC----AA----C---C
i Semnopithecus_entellus.k141_1672505                    I 2 C 0
s Semnopithecus_hypoleucos.k141_1615806                      28005  7 +     39453 C--------TC----AA----C---C
i Semnopithecus_hypoleucos.k141_1615806                  I 2 C 0
s Semnopithecus_johnii.k141_670120                            8523  7 +     27826 C--------TC----AA----C---C
i Semnopithecus_johnii.k141_670120                       I 2 C 0
s Semnopithecus_priam.k141_638794                             8045  7 -     19483 C--------TC----AA----C---C
i Semnopithecus_priam.k141_638794                        I 2 C 0
s Semnopithecus_schistaceus.k141_1572284                      1346  7 -     12762 C--------TC----AA----C---C
i Semnopithecus_schistaceus.k141_1572284                 I 2 C 0
s Semnopithecus_vetulus.k141_910252                           1207  7 +     13763 C--------TC----AA----C---C
i Semnopithecus_vetulus.k141_910252                      I 2 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     1306  6 -     30804 C--------T-----AA----A---C
i Sigmodon_hispidus.SigHis_scaffold_42075                I 2 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               4814  6 +   1910179 T--------T-----CC----A---C
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 3
s Sorex_araneus.JH798187.1                                13652052  5 -  18376816 ---------T-----CA----A---C
i Sorex_araneus.JH798187.1                               I 1 I 3
s Spermophilus_dauricus.KZ294078.1                         1955152  2 -   3870691 ---------------------C---T
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             32064  6 +     97271 C--------C-----CA----A---C
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 6
s Suricata_suricatta.SurSur_flattened_line_6629              19384  6 -    196729 C--------T-----CA----A---C
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 6
s Sus_scrofa.JH118708.1                                      37458  8 -     47482 C--------T-----CA----ACA-A
i Sus_scrofa.JH118708.1                                  C 0 I 3
s Tadarida_brasiliensis.TadBra_scaffold_25820                11877  6 +     41958 C--------T-----GA----A---C
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 3
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73666  6 +    116680 C--------T-----CA----A---C
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 1 I 3
s Theropithecus_gelada.CM009954.1                        186429693  7 + 186847797 C--------TC----AA----C---C
i Theropithecus_gelada.CM009954.1                        I 2 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106427  6 +    114563 C--------T-----CA----A---A
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   7405  6 +      8208 C--------T-----CA----G---T
i Tolypeutes_matacus.TolMat_scaffold_228639              I 1 I 3
s Tonatia_saurophila.TonSau_scaffold_294                     82266  6 +    610378 c--------t-----ga----a---c
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 3
s Trachypithecus_auratus.k141_722599                         12096  7 -     20410 C--------TC----AA----C---C
i Trachypithecus_auratus.k141_722599                     I 2 C 0
s Trachypithecus_crepusculus.k141_582567                      1210  7 -     12674 C--------TC----AA----C---C
i Trachypithecus_crepusculus.k141_582567                 I 2 C 0
s Trachypithecus_cristatus.k141_580354                       12197  7 +     19930 C--------TC----AA----C---C
i Trachypithecus_cristatus.k141_580354                   I 2 C 0
s Trachypithecus_francoisi.k141_1412647                       8608  7 -     19997 C--------TC----AA----C---C
i Trachypithecus_francoisi.k141_1412647                  I 2 C 0
s Trachypithecus_geei.k141_277701                            48747  7 -     60166 C--------TC----AA----C---C
i Trachypithecus_geei.k141_277701                        I 2 C 0
s Trachypithecus_germaini.k141_912491                        16219  7 -     27529 C--------TC----AA----C---C
i Trachypithecus_germaini.k141_912491                    I 2 C 0
s Trachypithecus_hatinhensis.k141_143409                     16163  7 -     18194 C--------TC----AA----C---C
i Trachypithecus_hatinhensis.k141_143409                 I 2 C 0
s Trachypithecus_laotum.k141_907409                           9875  7 -     21137 C--------TC----AA----C---C
i Trachypithecus_laotum.k141_907409                      I 2 C 0
s Trachypithecus_leucocephalus.k141_587342                    8578  7 -     10723 C--------TC----AA----C---C
i Trachypithecus_leucocephalus.k141_587342               I 2 C 0
s Trachypithecus_melamera.k141_434728                         7750  7 +      9834 C--------TC----AA----C---C
i Trachypithecus_melamera.k141_434728                    I 2 C 0
s Trachypithecus_obscurus.k141_190785                        26063  7 +     32220 C--------TC----AA----C---C
i Trachypithecus_obscurus.k141_190785                    I 2 C 0
s Trachypithecus_phayrei.ctg124                            5940165  7 +   6242583 C--------TC----AA----C---C
i Trachypithecus_phayrei.ctg124                          I 2 C 0
s Trachypithecus_pileatus.k141_2007326                        9416  7 +     20839 C--------TC----AA----C---C
i Trachypithecus_pileatus.k141_2007326                   I 2 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                     681  8 +     27266 C--------T-----CA----ACA-A
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 I 3
s Trichechus_manatus.JH594705.1                            4294911  6 +  10818551 C--------T-----CA----G---C
i Trichechus_manatus.JH594705.1                          C 0 I 6
s Tupaia_chinensis.KB320699.1                              2156837  4 +   4065304 C--------T-----CA---------
i Tupaia_chinensis.KB320699.1                            I 1 I 1
s Tupaia_tana.TupTan_flattened_line_97126                    10285  4 -     10553 C--------T-----CA---------
i Tupaia_tana.TupTan_flattened_line_97126                I 1 I 1
s Tursiops_truncatus.MRVK01000835.1                       15738934  8 +  33153633 C--------T-----CA----ATA-A
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 3
s Uropsilus_gracilis.UroGra_scaffold_12083                   54355  9 -     77625 g--------t--caaca----a---c
i Uropsilus_gracilis.UroGra_scaffold_12083               I 2 I 3
s Ursus_maritimus.KK499267.1                               4851493  6 -   5085361 C--------C-----CA----A---C
i Ursus_maritimus.KK499267.1                             I 2 I 6
s Varecia_rubra.k141_590885                                  12475  7 +     50397 C--------T-C---AA----C---A
i Varecia_rubra.k141_590885                              I 2 C 0
s Varecia_variegata.k141_1128296                             12534  7 +     24756 C--------T-C---AA----C---A
i Varecia_variegata.k141_1128296                         I 2 C 0
s Vicugna_pacos.KN270157.1                                 5372824 10 -   5488506 C--------T-----TACAATA---A
i Vicugna_pacos.KN270157.1                               C 0 I 3
s Vulpes_lagopus.VulLag_flattened_line_30954                 11850  6 -     43706 c--------c-----ta----a---c
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 6
s Xerus_inauris.XerIna_scaffold_2302                          2123  2 +    224448 ---------------------C---T
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      15906  6 +     63895 A--------T-----CA----A---C
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 2 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_3601914            281  8 +       295 C--------T-----CA----GTA-A
i Ziphius_cavirostris.ZipCav_flattened_line_3601914      C 0 I 3
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Tarsius_wallacei.k141_254427                                1877  3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080  3 +     70052 I
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Rattus_norvegicus.chr16                                 53571621  2 +  90668790 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             35221  4 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1851541  4 +   8254450 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Glis_glis.GliGli_scaffold_19807                            32063  0 +     49224 C
e Erinaceus_europaeus.JH835339.1                           3329292  0 -   7059049 C
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Cephalopachus_bancanus.k141_1423433                         6085  3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Carlito_syrichta.NW_007259797.1                           156587  3 -    496798 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       7897 1 +     62944 G
s Acomys_cahirinus.AcoCah_scaffold_12655                     71802 1 +     87051 A
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     75514 1 -     89534 A
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   15825 1 -     52922 G
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15745 1 -     28001 G
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          6243 1 -     18505 A
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           7095 1 -     12518 A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Aotus_azarae.k141_3104676                                  16907 1 -     33861 A
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            16904 1 -     34016 A
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299331 1 -   5030052 A
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             16940 1 -     34685 A
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               30065 1 -     47192 A
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13674 1 +     20879 A
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 8 C 0
s Arctocebus_calabarensis.k141_2318572                       12338 1 +     14667 A
i Arctocebus_calabarensis.k141_2318572                   C 0 N 0
s Avahi_laniger.k141_765380                                  54762 1 -     92717 A
i Avahi_laniger.k141_765380                              C 0 I 1810
s Avahi_peyrierasi.k141_1424874                              55393 1 +     85213 A
i Avahi_peyrierasi.k141_1424874                          C 0 I 1813
s Callibella_humilis.k141_1278103                             6784 1 -     10423 G
i Callibella_humilis.k141_1278103                        C 0 C 0
s Callithrix_geoffroyi.k119_69176                              623 1 +      5377 G
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592484 1 - 189096842 G
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1298 1 -     12329 G
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    2060 1 -     12242 A
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138352 1 +    179628 a
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Cebuella_niveiventris.k141_1251222                         11224 1 -     11392 G
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               7408 1 -      7577 G
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25653834 1 +  26074798 G
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                1772 1 +     28840 G
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 1501 1 +     14051 A
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Cercocebus_atys.KQ010504.1                               4476762 1 +   4669795 G
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        1264 1 +     17872 G
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           1853 1 -     14043 G
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9954 1 +     27781 G
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        10122 1 -     20310 G
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          13102 1 +     29689 G
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7848 1 -     20078 G
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          15770 1 -     27936 G
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            4636 1 -     17152 G
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38818181 1 +  39242232 G
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223870 1 -  21565898 G
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40989 1 -     53127 A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        1240 1 +     13442 G
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15789 1 -     27947 G
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         15765 1 +     17596 G
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          1808 1 +     14005 G
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1253937 1 +   2543920 A
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2206961                           2108 1 -     15524 A
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18429747 1 -  18827391 G
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       16183 1 -     50209 G
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135423184 1 + 135778131 G
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1911662 1 +   2368649 G
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949914 1 + 200372422 G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              38196 1 +     84244 G
i Colobus_polykomos.k141_906115                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 51081 1 +     63868 A
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11668560 1 + 224834208 A
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    838126 1 +   1526836 A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  36926 1 +     51376 G
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12538338 1 -  12879189 A
i Daubentonia_madagascariensis.ctg71                     C 0 I 3144
s Dinomys_branickii.DinBra_scaffold_21862                    37412 1 +     67921 A
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          21539 1 -    110024 A
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                            1445 1 +      8657 A
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Erythrocebus_patas.Contig38                             21206352 1 -  21539334 A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_576796                              41190 1 -     44621 A
i Eulemur_albifrons.k141_576796                          C 0 I 1795
s Eulemur_collaris.k141_377015                                7571 1 -     16928 A
i Eulemur_collaris.k141_377015                           C 0 I 1796
s Eulemur_coronatus.k141_885031                              16603 1 -     25546 A
i Eulemur_coronatus.k141_885031                          C 0 I 1794
s Eulemur_flavifrons.k141_1184614                            13799 1 +     26330 A
i Eulemur_flavifrons.k141_1184614                        C 0 I 1793
s Eulemur_fulvus.k141_544389                                 15034 1 +     23973 A
i Eulemur_fulvus.k141_544389                             C 0 I 1795
s Eulemur_macaco.k141_1562045                                13796 1 +     75513 A
i Eulemur_macaco.k141_1562045                            C 0 I 1788
s Eulemur_mongoz.k141_232305                                 11726 1 +     97555 A
i Eulemur_mongoz.k141_232305                             C 0 I 1796
s Eulemur_rubriventer.k141_774594                             1218 1 +     13026 A
i Eulemur_rubriventer.k141_774594                        C 0 I 1798
s Eulemur_rufus.k141_1476633                                  5270 1 -     17153 A
i Eulemur_rufus.k141_1476633                             C 0 I 1795
s Eulemur_sanfordi.k141_1122526                              14843 1 +    111500 A
i Eulemur_sanfordi.k141_1122526                          C 0 I 1795
s Galago_moholi.ctg2040                                     427641 1 -    453645 A
i Galago_moholi.ctg2040                                  C 0 I 1972
s Galago_senegalensis.k141_631886                             5331 1 +     11339 A
i Galago_senegalensis.k141_631886                        C 0 I 1972
s Galagoides_demidoff.k141_1711393                            2629 1 +     41679 A
i Galagoides_demidoff.k141_1711393                       C 0 I 1963
s Galeopterus_variegatus.GalVar_scaffold_108840               2251 1 -      9135 a
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              17154 1 -     32273 G
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186339289 1 + 186649187 G
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33662 1 +     78134 G
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_170648                           7898 1 -     19426 A
i Hapalemur_alaotrensis.k141_170648                      C 0 I 1795
s Hapalemur_gilberti.k141_488810                             13051 1 -     15286 A
i Hapalemur_gilberti.k141_488810                         C 0 I 1795
s Hapalemur_griseus.k141_1511508                             14690 1 +     18253 A
i Hapalemur_griseus.k141_1511508                         C 0 I 1795
s Hapalemur_meridionalis.k141_248335                         14791 1 -     41752 A
i Hapalemur_meridionalis.k141_248335                     C 0 I 1795
s Hapalemur_occidentalis.k141_907772                         14628 1 -     16460 A
i Hapalemur_occidentalis.k141_907772                     C 0 I 1801
s Heterocephalus_glaber.JH602082.1                        20663221 1 +  22651954 A
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hoolock_leuconedys.ctg274                                    435955 1 +    630532 A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84104 1 +    135385 A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7522007 1 -   7955117 G
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_3655594                                   23585 1 +     31101 A
i Indri_indri.k141_3655594                               C 0 I 1809
s Jaculus_jaculus.JH725527.1                               8278176 1 -   9596543 A
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lemur_catta.scaffold_24                                 15525143 1 -  30322482 A
i Lemur_catta.scaffold_24                                C 0 I 1795
s Leontocebus_fuscicollis.k141_1820339                        9063 1 +     64341 A
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           1403 1 -     35062 A
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        9090 1 +     35603 A
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    30703 1 +     38576 T
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         27407 1 +     66356 T
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     7800 1 -     14121 G
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1438305 1 +   1826925 G
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_399337                            16007 1 -     33856 A
i Loris_lydekkerianus.k141_399337                        C 0 I 1630
s Loris_tardigradus.ctg83                                  1013718 1 +   6120653 A
i Loris_tardigradus.ctg83                                C 0 I 1630
s Macaca_arctoides.k141_2326796                               8120 1 +     40492 G
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59677379 1 +  60120075 G
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13895 1 -     26193 G
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            81675 1 -    114318 G
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  7366 1 -     23192 G
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16828 1 -     29190 G
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  25404 1 +     37952 G
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186840493 1 + 187317192 G
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25459045 1 -  25927173 G
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  81252 1 +     89720 G
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 8253 1 +     20474 G
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   8042 1 -     14993 G
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  330908 1 -    668171 G
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 6366 1 -     24072 G
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26991 1 -     45290 G
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23938582 1 -  24302211 G
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352704 1 +    752769 A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33104294 1 -  40650429 G
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 33767 1 +    140813 A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12183222 1 -  29670104 A
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_1239457                                7220 1 -      7380 G
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_schneideri.k141_1950671                                      7193 1 -      7356 G
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11261524 1 -  27267610 A
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miopithecus_ogouensis.k141_534055                          10268 1 -     28506 G
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mus_caroli.LT608237.1                                   84362383 1 - 120012414 A
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87651376 1 - 129401213 A
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31356030 1 -  89631738 A
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90753439 1 - 130317789 A
i Mus_spretus.CM004101.1                                 C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     72242 1 -     80779 A
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Nannospalax_galili.KL204047.1                            2035593 1 -   3037898 A
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               16289 1 +     21681 G
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nycticebus_bengalensis.LG01                            102587247 1 - 196305487 A
i Nycticebus_bengalensis.LG01                            C 0 I 8603
s Nycticebus_coucang.k141_1127096                             1171 1 +      2075 A
i Nycticebus_coucang.k141_1127096                        C 0 N 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105762602 1 + 199412804 A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 9170
s Ochotona_princeps.JH802162.1                             1365253 1 +   3988456 G
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   26173 1 +     28053 A
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    81210 1 +    102263 A
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67148701 1 + 174332312 G
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         5156 1 +      8798 A
i Otolemur_crassicaudatus.k141_222918                    C 0 I 1949
s Otolemur_garnettii.GL873799.1                             697318 1 -   1103335 A
i Otolemur_garnettii.GL873799.1                          C 0 I 2026
s Pan_paniscus.KQ411613.1                                    45240 1 +     80009 G
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189144140 1 + 189151597 G
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                183444382 1 + 183742232 G
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             8028 1 +     20448 G
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20564840 1 +  20919399 G
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6772 1 +     41871 G
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    10065 1 +     27711 G
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  1062 1 -     11374 G
i Papio_ursinus.k141_5274964                             C 0 C 0
s Perodicticus_ibeanus.k141_855320                           11147 1 +     13100 A
i Perodicticus_ibeanus.k141_855320                       C 0 N 0
s Perodicticus_potto.k141_1092580                             9541 1 +     25941 A
i Perodicticus_potto.k141_1092580                        C 0 N 0
s Peromyscus_maniculatus.KI615324.1                       18195789 1 -  18517816 A
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     29141 1 -     29689 A
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Piliocolobus_badius.k141_1234363                           44781 1 +     62158 G
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        39528 1 +     89929 G
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40944 1 +     51399 G
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14297185 1 -  14605196 G
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189132285 1 + 189387572 G
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9571892 1 +   9816681 G
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               74464 1 -     81375 G
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              6285 1 +     19060 G
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2597823 1 -   4620579 A
i Prolemur_simus.MPIZ01000396.1                          C 0 I 1795
s Propithecus_coquerelli.NW_012148875.1                     991803 1 +   2598838 A
i Propithecus_coquerelli.NW_012148875.1                  I 2 I 1814
s Propithecus_coronatus.k141_347390                          30115 1 +     38485 A
i Propithecus_coronatus.k141_347390                      I 2 I 1815
s Propithecus_diadema.k141_58108                              2157 1 -     13098 A
i Propithecus_diadema.k141_58108                         I 2 I 1810
s Propithecus_edwardsi.k141_1176054                          27636 1 +     35766 A
i Propithecus_edwardsi.k141_1176054                      I 2 I 1810
s Propithecus_perrieri.k141_1200571                           5823 1 -     24134 A
i Propithecus_perrieri.k141_1200571                      I 2 I 1811
s Propithecus_tattersalli.k141_790011                        29648 1 -     67325 A
i Propithecus_tattersalli.k141_790011                    I 2 I 1814
s Propithecus_verreauxi.k141_956661                           5871 1 -      6182 A
i Propithecus_verreauxi.k141_956661                      I 2 N 0
s Psammomys_obesus.NESX01036370.1                            11413 1 -     21651 A
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pygathrix_cinerea.k141_1153803                             16271 1 -     91421 G
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7610391 1 +   7812017 G
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             16270 1 -     72585 G
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             7981 1 -     11128 G
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91237330 1 - 195417433 G
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672986 1 +   7961872 G
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_8081                                  2373 1 +     42994 A
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                             1072 1 +      2253 A
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               1501 1 -      8737 A
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                              1154 1 +      2343 A
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209476031 1 + 209938924 A
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                 477 1 -      7576 A
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119952109 1 - 121099817 G
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24451 1 +     46362 G
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               24546 1 +     45824 G
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             41225 1 -     64574 G
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4298 1 -     23631 G
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 24442 1 -     61129 G
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5421788 1 -   5703754 C
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          57029 1 -     80660 C
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Semnopithecus_entellus.k141_1672505                         1162 1 -     12572 G
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      28012 1 +     39453 G
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            8530 1 +     27826 G
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             8052 1 -     19483 G
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      1353 1 -     12762 G
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           1214 1 +     13763 G
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     1312 1 -     30804 A
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1955154 1 -   3870691 G
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Theropithecus_gelada.CM009954.1                        186429700 1 + 186847797 G
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106433 1 +    114563 A
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Trachypithecus_auratus.k141_722599                         12103 1 -     20410 G
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      1217 1 -     12674 G
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       12204 1 +     19930 G
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       8615 1 -     19997 G
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48754 1 -     60166 G
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        16226 1 -     27529 G
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     16170 1 -     18194 G
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9882 1 -     21137 G
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    8585 1 -     10723 G
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7757 1 +      9834 G
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        26070 1 +     32220 G
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5940172 1 +   6242583 G
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        9423 1 +     20839 G
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2156842 1 +   4065304 A
i Tupaia_chinensis.KB320699.1                            I 1 C 0
s Tupaia_tana.TupTan_flattened_line_97126                    10290 1 -     10553 A
i Tupaia_tana.TupTan_flattened_line_97126                I 1 C 0
s Varecia_rubra.k141_590885                                  12482 1 +     50397 A
i Varecia_rubra.k141_590885                              C 0 I 1793
s Varecia_variegata.k141_1128296                             12541 1 +     24756 A
i Varecia_variegata.k141_1128296                         C 0 I 1793
s Xerus_inauris.XerIna_scaffold_2302                          2125 1 +    224448 G
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      15912 1 +     63895 A
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Echinops_telfairi.JH980293.1                            48781840 6 + 111700974 I
e Callimico_goeldii.k141_737284                                327 0 -     31217 C
e Alouatta_seniculus.k141_117119                             15919 0 +     50774 C
e Alouatta_puruensis.k141_362188                              1467 0 +      5663 C
e Alouatta_palliata.k141_2135620                              4735 0 +     47717 C
e Alouatta_nigerrima.k141_1929159                              740 0 +     30492 C
e Alouatta_macconnelli.k141_918386                            1784 0 -      9457 C
e Alouatta_juara.k141_1302312                                  740 0 +     27940 C
e Alouatta_discolor.k141_566626                              12227 0 +     28687 C
e Alouatta_caraya.k141_1701091                                1775 0 -     36483 C
e Alouatta_belzebul.k141_3560514                              8666 0 +     51355 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_3601914            289 3 +       295 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 11856 6 -     43706 I
e Vicugna_pacos.KN270157.1                                 5372834 3 -   5488506 I
e Ursus_maritimus.KK499267.1                               4851499 6 -   5085361 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   54364 3 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738942 3 +  33153633 I
e Trichechus_manatus.JH594705.1                            4294917 6 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_40725                     689 3 +     27266 I
e Tonatia_saurophila.TonSau_scaffold_294                     82272 3 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   7411 3 +      8208 I
e Tarsius_wallacei.k141_254427                                1877 3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080 3 +     70052 I
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73672 3 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                11883 3 +     41958 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sus_scrofa.JH118708.1                                      37466 3 -     47482 I
e Suricata_suricatta.SurSur_flattened_line_6629              19390 6 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             32070 6 +     97271 I
e Sorex_araneus.JH798187.1                                13652057 3 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4820 3 +   1910179 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    154266 3 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                88888 3 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        368062 3 -   3329780 I
e Rattus_norvegicus.chr16                                 53571621 2 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  6332 3 +     55207 I
e Puma_concolor.QAVW01001104.1                            20275373 6 -  38429054 I
e Pteropus_vampyrus.KN534172.1                                7899 3 -      8028 I
e Pteropus_alecto.KB030862.1                              22977846 3 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         41596 6 +     42204 I
e Pteronotus_parnellii.KE909381.1                            16213 3 -     21811 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15752 24 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35437 3 +     35617 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             2830 3 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9736 3 +     63832 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13707 6 -     78924 I
e Pantholops_hodgsonii.KE114653.1                          1265751 3 -   2937107 I
e Panthera_tigris.KE722367.1                               4722301 6 -   8748460 I
e Panthera_pardus.KV860321.1                                265421 6 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  152212 6 +    230217 I
e Ovis_canadensis.OviCan_scaffold_2572                      174833 3 -    191736 I
e Ovis_aries.CM001607.2                                   17586856 3 +  44047080 I
e Otocyon_megalotis.JAEUCK010005147.1                       463408 6 -    559221 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12233 6 -     18566 I
e Orcinus_orca.KB316932.1                                  2782697 3 -  10937097 I
e Okapia_johnstoni.LVCL01S0005463.1                          77590 3 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              507738 6 -   2017862 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nyctereutes_procyonoides.CAJHUB010000658.1               9150459 6 -   9404916 I
e Noctilio_leporinus.NocLep_scaffold_251                    758920 3 +    783361 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866774 3 +   7148211 I
e Neomonachus_schauinslandi.NINY01007730.1                20308593 6 +  31847680 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190307 3 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_281845                        1041 3 +      1835 I
e Myotis_lucifugus.GL429869.1                              3904890 3 -   4330536 I
e Myotis_davidii.KB100139.1                                1588793 3 -   6019432 I
e Myotis_brandtii.KE162005.1                                281538 3 -  10118263 I
e Mustela_putorius.JH418006.1                               302789 6 -  14710649 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           7896 3 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398 7 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1758 3 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 142718 3 -    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27817 3 -    437263 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7000 6 -      8324 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             35221 4 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1851541 4 +   8254450 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                16929 3 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24552 6 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    4311 3 +     10310 I
e Mellivora_capensis.MelCap_flattened_line_69365             11396 6 +     13704 I
e Megaderma_lyra.MegLyr_scaffold_4542                        14416 21 -    207569 I
e Manis_pentadactyla.KN006162.1                              51314 6 -    317179 I
e Manis_javanica.JSZB01003497.1                              19328 6 +    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_8222                 91705 3 +     94391 I
e Lycaon_pictus.CM007581.1                                17956396 6 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219629 6 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268694 3 -    662738 I
e Leptonychotes_weddellii.KB714746.1                       3044133 6 +   3914936 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lasiurus_borealis.LasBor_scaffold_32767                    17449 3 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                3000 3 -      3359 I
e Inia_geoffrensis.IniGeo_flattened_line_48101               23643 3 +     23964 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  46090 6 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_29171               43006 3 +     43066 I
e Hipposideros_armiger.JXIK01000431.1                       111572 3 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3299 24 +      7595 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18881 3 +     36099 I
e Helogale_parvula.HelPar_flattened_line_2585               243387 6 +    327341 I
e Glis_glis.GliGli_scaffold_19807                            32063 0 +     49224 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609677 3 -    660261 I
e Fukomys_damarensis.KN121974.1                             851459 0 +   3816255 C
e Felis_nigripes.FelNig_flattened_line_20823                 10604 6 -     36744 I
e Felis_catus_fca126.CM031415.1                           20196850 6 + 205367284 I
e Eubalaena_japonica.EubJap_flattened_line_31514             26039 3 -     44125 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           12102 3 +    133382 I
e Erinaceus_europaeus.JH835339.1                           3329292 0 -   7059049 C
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2146793 3 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16330680 6 -  41312741 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311712 3 +    607251 I
e Eidolon_helvum.KE759718.1                                  11612 3 +     11740 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8631176 3 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812428 3 +  35494412 I
e Dasypus_novemcinctus.JH564415.1                            64541 3 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             29548 6 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_37019               3997 3 -     19598 I
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           1546 3 +     23735 I
e Condylura_cristata.JH655891.1                           17549112 2 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1524 3 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Cephalopachus_bancanus.k141_1423433                         6085 3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     94609 3 +    217609 I
e Carollia_perspicillata.CarPer_scaffold_92756                6179 3 -     11696 I
e Carlito_syrichta.NW_007259797.1                           156587 3 -    496798 I
e Capra_hircus.CM004588.1                                 18061396 3 -  44709034 I
e Capra_aegagrus.CM003241.1                               18830676 3 +  46296322 I
e Canis_lupus_orion.HG994398.1                            18501453 6 +  63665305 I
e Canis_lupus_familiaris.chr16                            17960156 6 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9035680 6 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                      985 6 -     43241 I
e CanFam4.chr16                                           17800237 6 -  60362399 I
e Camelus_ferus.KB017975.1                                  404083 3 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2335784 3 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10003308 3 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2820048 3 +   4408762 I
e Bos_taurus.CM000184.6                                   18200416 57 - 114055384 I
e Bos_mutus.JH880303.1                                     1126298 3 -   1948126 I
e Bos_indicus.CM003028.1                                  18363442 57 - 116941312 I
e Bison_bison.KN261452.1                                    200538 3 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    27480 3 +     34529 I
e Balaenoptera_bonaerensis.DF707048.1                         3255 3 -     18090 I
e Balaenoptera_acutorostrata.KI537508.1                   15192790 3 +  23207421 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  5810 3 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             99039 3 -    100397 I
e Anoura_caudifer.AnoCau_scaffold_1412                      186428 22 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676558 3 -   2318259 I
e Ailurus_fulgens.LNAC01001112.1                             80727 6 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9511652 6 -  29979442 I
e Acinonyx_jubatus.LLWD01001279.1                           828365 6 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       7898 1 +     62944 C
s Acomys_cahirinus.AcoCah_scaffold_12655                     71803 1 +     87051 A
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 4
s Allactaga_bullata.AllBul_scaffold_9566                     75515 1 -     89534 A
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 4
s Allenopithecus_nigroviridis.k141_3361533                   15826 1 -     52922 T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15746 1 -     28001 T
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          6244 1 -     18505 T
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           7096 1 -     12518 T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Aotus_azarae.k141_3104676                                  16908 1 -     33861 C
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            16905 1 -     34016 C
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299332 1 -   5030052 C
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             16941 1 -     34685 C
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               30066 1 -     47192 C
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13675 1 +     20879 T
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 4
s Arctocebus_calabarensis.k141_1648548                         442 1 +      5281 T
i Arctocebus_calabarensis.k141_1648548                   N 0 C 0
s Callibella_humilis.k141_1278103                             6785 1 -     10423 T
i Callibella_humilis.k141_1278103                        C 0 N 0
s Callithrix_geoffroyi.k119_69176                              624 1 +      5377 T
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592485 1 - 189096842 T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1299 1 -     12329 T
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    2061 1 -     12242 A
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 4
s Castor_canadensis.CasCan_scaffold_2074                    138353 1 +    179628 a
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 4
s Cebuella_niveiventris.k141_1251222                         11225 1 -     11392 T
i Cebuella_niveiventris.k141_1251222                     C 0 C 0
s Cebuella_pygmaea.k141_1309012                               7409 1 -      7577 T
i Cebuella_pygmaea.k141_1309012                          C 0 C 0
s Cebus_albifrons.Contig27                                25653835 1 +  26074798 C
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                1773 1 +     28840 C
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 1502 1 +     14051 C
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Cercocebus_atys.KQ010504.1                               4476763 1 +   4669795 C
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        1265 1 +     17872 C
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           1854 1 -     14043 C
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9955 1 +     27781 C
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        10123 1 -     20310 C
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          13103 1 +     29689 C
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7849 1 -     20078 T
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          15771 1 -     27936 T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            4637 1 -     17152 C
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38818182 1 +  39242232 C
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223871 1 -  21565898 C
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40990 1 -     53127 C
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        1241 1 +     13442 C
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15790 1 -     27947 C
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         15766 1 +     17596 C
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          1809 1 +     14005 T
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1253938 1 +   2543920 A
i Chinchilla_lanigera.JH722012.1                         C 0 I 4
s Chiropotes_albinasus.k141_2206961                           2109 1 -     15524 C
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18429748 1 -  18827391 T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       16184 1 -     50209 T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135423185 1 + 135778131 T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1911663 1 +   2368649 C
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949915 1 + 200372422 C
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              38197 1 +     84244 C
i Colobus_polykomos.k141_906115                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 51082 1 +     63868 A
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 4
s Cricetulus_griseus.LT883664.1                           11668561 1 + 224834208 A
i Cricetulus_griseus.LT883664.1                          C 0 I 4
s Ctenodactylus_gundi.CteGun_scaffold_65                    838127 1 +   1526836 A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 4
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  36927 1 +     51376 A
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 4
s Dinomys_branickii.DinBra_scaffold_21862                    37413 1 +     67921 A
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 2
s Ellobius_lutescens.LOEQ01008920.1                          21540 1 -    110024 G
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 4
s Ellobius_talpinus.LOJH01081419.1                            1446 1 +      8657 G
i Ellobius_talpinus.LOJH01081419.1                       C 0 I 4
s Erythrocebus_patas.Contig38                             21206353 1 -  21539334 T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Galago_moholi.ctg2040                                     429614 1 -    453645 T
i Galago_moholi.ctg2040                                  I 1972 C 0
s Galago_senegalensis.k141_631886                             7304 1 +     11339 T
i Galago_senegalensis.k141_631886                        I 1972 C 0
s Galagoides_demidoff.k141_1711393                            4593 1 +     41679 T
i Galagoides_demidoff.k141_1711393                       I 1963 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               2252 1 -      9135 g
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 I 3
s Gorilla_beringei.k141_3596273                              17155 1 -     32273 C
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186339290 1 + 186649187 C
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33663 1 +     78134 T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 32
s Heterocephalus_glaber.JH602082.1                        20663222 1 +  22651954 G
i Heterocephalus_glaber.JH602082.1                       C 0 I 7
s Hoolock_leuconedys.ctg274                                    435956 1 +    630532 C
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84105 1 +    135385 A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 4
s Ictidomys_tridecemlineatus.JH393364.1                    7522008 1 -   7955117 T
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 4
s Jaculus_jaculus.JH725527.1                               8278177 1 -   9596543 A
i Jaculus_jaculus.JH725527.1                             C 0 I 4
s Leontocebus_fuscicollis.k141_1820339                        9064 1 +     64341 C
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           1404 1 -     35062 C
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        9091 1 +     35603 C
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    30704 1 +     38576 T
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         27408 1 +     66356 T
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     7801 1 -     14121 A
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 4
s Lophocebus_aterrimus.ctg367                              1438306 1 +   1826925 C
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_399337                            17638 1 -     33856 T
i Loris_lydekkerianus.k141_399337                        I 1630 C 0
s Loris_tardigradus.ctg83                                  1015349 1 +   6120653 T
i Loris_tardigradus.ctg83                                I 1630 C 0
s Macaca_arctoides.k141_2326796                               8121 1 +     40492 C
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59677380 1 +  60120075 C
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13896 1 -     26193 C
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            81676 1 -    114318 C
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  7367 1 -     23192 C
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16829 1 -     29190 C
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  25405 1 +     37952 C
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186840494 1 + 187317192 C
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25459046 1 -  25927173 C
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  81253 1 +     89720 C
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 8254 1 +     20474 C
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   8043 1 -     14993 C
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  330909 1 -    668171 C
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 6367 1 -     24072 C
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26992 1 -     45290 C
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23938583 1 -  24302211 C
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352705 1 +    752769 C
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33104295 1 -  40650429 T
i Marmota_marmota.CZRN01000018.1                         C 0 I 4
s Meriones_unguiculatus.MerUng_scaffold_7390                 33768 1 +    140813 A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 4
s Mesocricetus_auratus.KB708134.1                         12183223 1 -  29670104 A
i Mesocricetus_auratus.KB708134.1                        C 0 I 4
s Mico_argentatus.k141_1239457                                7221 1 -      7380 T
i Mico_argentatus.k141_1239457                           C 0 C 0
s Mico_schneideri.k141_1950671                                      7194 1 -      7356 T
i Mico_schneideri.k141_1950671                                 C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11261525 1 -  27267610 G
i Microtus_ochrogaster.CM001695.1                        C 0 I 4
s Miopithecus_ogouensis.k141_534055                          10269 1 -     28506 C
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mus_caroli.LT608237.1                                   84362384 1 - 120012414 A
i Mus_caroli.LT608237.1                                  C 0 I 4
s Mus_musculus.chr8                                       87651377 1 - 129401213 A
i Mus_musculus.chr8                                      C 0 I 2
s Mus_pahari.LT608297.1                                   31356031 1 -  89631738 A
i Mus_pahari.LT608297.1                                  C 0 I 4
s Mus_spretus.CM004101.1                                  90753440 1 - 130317789 A
i Mus_spretus.CM004101.1                                 C 0 I 2
s Myocastor_coypus.MyoCoy_scaffold_10123                     72243 1 -     80779 G
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 I 4
s Nannospalax_galili.KL204047.1                            2035594 1 -   3037898 A
i Nannospalax_galili.KL204047.1                          C 0 I 4
s Nasalis_larvatus.k141_413338                               16290 1 +     21681 C
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nycticebus_bengalensis.LG01                            102595851 1 - 196305487 T
i Nycticebus_bengalensis.LG01                            I 8603 C 0
s Nycticebus_coucang.k141_1514628                             1318 1 -      5837 T
i Nycticebus_coucang.k141_1514628                        N 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771773 1 + 199412804 T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 9170 C 0
s Ochotona_princeps.JH802162.1                             1365254 1 +   3988456 A
i Ochotona_princeps.JH802162.1                           C 0 I 4
s Ondatra_zibethicus.OndZib_scaffold_46174                   26174 1 +     28053 G
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 4
s Onychomys_torridus.OnyTor_scaffold_2986                    81211 1 +    102263 A
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 4
s Oryctolagus_cuniculus.CM000791.1                        67148702 1 + 174332312 A
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 4
s Otolemur_crassicaudatus.k141_222918                         7106 1 +      8798 T
i Otolemur_crassicaudatus.k141_222918                    I 1949 C 0
s Otolemur_garnettii.GL873799.1                             699345 1 -   1103335 t
i Otolemur_garnettii.GL873799.1                          I 2026 C 0
s Pan_paniscus.KQ411613.1                                    45241 1 +     80009 C
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189144141 1 + 189151597 C
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                183444383 1 + 183742232 C
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             8029 1 +     20448 C
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20564841 1 +  20919399 C
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6773 1 +     41871 C
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    10066 1 +     27711 C
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  1063 1 -     11374 C
i Papio_ursinus.k141_5274964                             C 0 C 0
s Perodicticus_ibeanus.k141_1182643                            123 1 -      3244 T
i Perodicticus_ibeanus.k141_1182643                      N 0 C 0
s Perodicticus_potto.k141_1186926                              501 1 +     10374 T
i Perodicticus_potto.k141_1186926                        N 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18195790 1 -  18517816 A
i Peromyscus_maniculatus.KI615324.1                      C 0 I 4
s Petromus_typicus.PetTyp_scaffold_42190                     29142 1 -     29689 G
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 I 4
s Piliocolobus_badius.k141_1234363                           44782 1 +     62158 C
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        39529 1 +     89929 C
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40945 1 +     51399 C
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14297186 1 -  14605196 C
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189132286 1 + 189387572 C
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9571893 1 +   9816681 C
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               74465 1 -     81375 T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              6286 1 +     19060 T
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            11414 1 -     21651 A
i Psammomys_obesus.NESX01036370.1                        C 0 I 4
s Pygathrix_cinerea.k141_1153803                             16272 1 -     91421 C
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7610392 1 +   7812017 C
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             16271 1 -     72585 C
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             7982 1 -     11128 C
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91237331 1 - 195417433 C
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672987 1 +   7961872 C
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_8081                                  2374 1 +     42994 C
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                             1073 1 +      2253 C
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               1502 1 -      8737 C
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                              1155 1 +      2343 C
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209476032 1 + 209938924 C
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                 478 1 -      7576 C
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119952110 1 - 121099817 C
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24452 1 +     46362 C
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               24547 1 +     45824 C
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             41226 1 -     64574 C
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4299 1 -     23631 C
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 24443 1 -     61129 C
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5421789 1 -   5703754 C
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          57030 1 -     80660 C
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Semnopithecus_entellus.k141_1672505                         1163 1 -     12572 C
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      28013 1 +     39453 C
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            8531 1 +     27826 C
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             8053 1 -     19483 C
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      1354 1 -     12762 C
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           1215 1 +     13763 C
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     1313 1 -     30804 A
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 I 4
s Spermophilus_dauricus.KZ294078.1                         1955155 1 -   3870691 T
i Spermophilus_dauricus.KZ294078.1                       C 0 I 4
s Theropithecus_gelada.CM009954.1                        186429701 1 + 186847797 C
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106434 1 +    114563 G
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 4
s Trachypithecus_auratus.k141_722599                         12104 1 -     20410 C
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      1218 1 -     12674 C
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       12205 1 +     19930 C
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       8616 1 -     19997 C
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48755 1 -     60166 C
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        16227 1 -     27529 C
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     16171 1 -     18194 C
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9883 1 -     21137 C
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    8586 1 -     10723 C
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7758 1 +      9834 C
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        26071 1 +     32220 C
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5940173 1 +   6242583 C
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        9424 1 +     20839 C
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2156843 1 +   4065304 A
i Tupaia_chinensis.KB320699.1                            C 0 I 4
s Tupaia_tana.TupTan_flattened_line_97126                    10291 1 -     10553 A
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 3
s Xerus_inauris.XerIna_scaffold_2302                          2126 1 +    224448 T
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 4
s Zapus_hudsonius.ZapHud_scaffold_11398                      15913 1 +     63895 A
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 4
e Echinops_telfairi.JH980293.1                            48781840 6 + 111700974 I
e Callimico_goeldii.k141_737284                                327 0 -     31217 C
e Alouatta_seniculus.k141_117119                             15919 0 +     50774 C
e Alouatta_puruensis.k141_362188                              1467 0 +      5663 C
e Alouatta_palliata.k141_2135620                              4735 0 +     47717 C
e Alouatta_nigerrima.k141_1929159                              740 0 +     30492 C
e Alouatta_macconnelli.k141_918386                            1784 0 -      9457 C
e Alouatta_juara.k141_1302312                                  740 0 +     27940 C
e Alouatta_discolor.k141_566626                              12227 0 +     28687 C
e Alouatta_caraya.k141_1701091                                1775 0 -     36483 C
e Alouatta_belzebul.k141_3560514                              8666 0 +     51355 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Ziphius_cavirostris.ZipCav_flattened_line_3601914            289 3 +       295 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 11856 6 -     43706 I
e Vicugna_pacos.KN270157.1                                 5372834 3 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851499 6 -   5085361 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   54364 3 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738942 3 +  33153633 I
e Trichechus_manatus.JH594705.1                            4294917 6 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_40725                     689 3 +     27266 I
e Tonatia_saurophila.TonSau_scaffold_294                     82272 3 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   7411 3 +      8208 I
e Tarsius_wallacei.k141_254427                                1877 3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080 3 +     70052 I
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73672 3 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                11883 3 +     41958 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sus_scrofa.JH118708.1                                      37466 3 -     47482 I
e Suricata_suricatta.SurSur_flattened_line_6629              19390 6 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             32070 6 +     97271 I
e Sorex_araneus.JH798187.1                                13652057 3 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4820 3 +   1910179 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    154266 3 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                88888 3 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        368062 3 -   3329780 I
e Rattus_norvegicus.chr16                                 53571621 2 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  6332 3 +     55207 I
e Puma_concolor.QAVW01001104.1                            20275373 6 -  38429054 I
e Pteropus_vampyrus.KN534172.1                                7899 3 -      8028 I
e Pteropus_alecto.KB030862.1                              22977846 3 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         41596 6 +     42204 I
e Pteronotus_parnellii.KE909381.1                            16213 3 -     21811 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15752 24 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35437 3 +     35617 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             2830 3 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9736 3 +     63832 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13707 6 -     78924 I
e Pantholops_hodgsonii.KE114653.1                          1265751 3 -   2937107 I
e Panthera_tigris.KE722367.1                               4722301 6 -   8748460 I
e Panthera_pardus.KV860321.1                                265421 6 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  152212 6 +    230217 I
e Ovis_canadensis.OviCan_scaffold_2572                      174833 3 -    191736 I
e Ovis_aries.CM001607.2                                   17586856 3 +  44047080 I
e Otocyon_megalotis.JAEUCK010005147.1                       463408 6 -    559221 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12233 6 -     18566 I
e Orcinus_orca.KB316932.1                                  2782697 3 -  10937097 I
e Okapia_johnstoni.LVCL01S0005463.1                          77590 3 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              507738 6 -   2017862 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nyctereutes_procyonoides.CAJHUB010000658.1               9150459 6 -   9404916 I
e Noctilio_leporinus.NocLep_scaffold_251                    758920 3 +    783361 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866774 3 +   7148211 I
e Neomonachus_schauinslandi.NINY01007730.1                20308593 6 +  31847680 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190307 3 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_281845                        1041 3 +      1835 I
e Myotis_lucifugus.GL429869.1                              3904890 3 -   4330536 I
e Myotis_davidii.KB100139.1                                1588793 3 -   6019432 I
e Myotis_brandtii.KE162005.1                                281538 3 -  10118263 I
e Mustela_putorius.JH418006.1                               302789 6 -  14710649 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           7896 3 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398 7 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1758 3 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 142718 3 -    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27817 3 -    437263 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7000 6 -      8324 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             35221 4 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1851541 4 +   8254450 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                16929 3 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24552 6 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    4311 3 +     10310 I
e Mellivora_capensis.MelCap_flattened_line_69365             11396 6 +     13704 I
e Megaderma_lyra.MegLyr_scaffold_4542                        14416 21 -    207569 I
e Manis_pentadactyla.KN006162.1                              51314 6 -    317179 I
e Manis_javanica.JSZB01003497.1                              19328 6 +    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_8222                 91705 3 +     94391 I
e Lycaon_pictus.CM007581.1                                17956396 6 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219629 6 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268694 3 -    662738 I
e Leptonychotes_weddellii.KB714746.1                       3044133 6 +   3914936 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Lasiurus_borealis.LasBor_scaffold_32767                    17449 3 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                3000 3 -      3359 I
e Inia_geoffrensis.IniGeo_flattened_line_48101               23643 3 +     23964 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  46090 6 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_29171               43006 3 +     43066 I
e Hipposideros_armiger.JXIK01000431.1                       111572 3 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3299 24 +      7595 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18881 3 +     36099 I
e Helogale_parvula.HelPar_flattened_line_2585               243387 6 +    327341 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Glis_glis.GliGli_scaffold_19807                            32063 0 +     49224 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609677 3 -    660261 I
e Fukomys_damarensis.KN121974.1                             851459 0 +   3816255 C
e Felis_nigripes.FelNig_flattened_line_20823                 10604 6 -     36744 I
e Felis_catus_fca126.CM031415.1                           20196850 6 + 205367284 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Eubalaena_japonica.EubJap_flattened_line_31514             26039 3 -     44125 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           12102 3 +    133382 I
e Erinaceus_europaeus.JH835339.1                           3329292 0 -   7059049 C
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2146793 3 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16330680 6 -  41312741 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311712 3 +    607251 I
e Eidolon_helvum.KE759718.1                                  11612 3 +     11740 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8631176 3 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812428 3 +  35494412 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64541 3 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             29548 6 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_37019               3997 3 -     19598 I
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           1546 3 +     23735 I
e Condylura_cristata.JH655891.1                           17549112 2 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1524 3 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Cephalopachus_bancanus.k141_1423433                         6085 3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     94609 3 +    217609 I
e Carollia_perspicillata.CarPer_scaffold_92756                6179 3 -     11696 I
e Carlito_syrichta.NW_007259797.1                           156587 3 -    496798 I
e Capra_hircus.CM004588.1                                 18061396 3 -  44709034 I
e Capra_aegagrus.CM003241.1                               18830676 3 +  46296322 I
e Canis_lupus_orion.HG994398.1                            18501453 6 +  63665305 I
e Canis_lupus_familiaris.chr16                            17960156 6 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9035680 6 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                      985 6 -     43241 I
e CanFam4.chr16                                           17800237 6 -  60362399 I
e Camelus_ferus.KB017975.1                                  404083 3 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2335784 3 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10003308 3 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2820048 3 +   4408762 I
e Bos_taurus.CM000184.6                                   18200416 57 - 114055384 I
e Bos_mutus.JH880303.1                                     1126298 3 -   1948126 I
e Bos_indicus.CM003028.1                                  18363442 57 - 116941312 I
e Bison_bison.KN261452.1                                    200538 3 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    27480 3 +     34529 I
e Balaenoptera_bonaerensis.DF707048.1                         3255 3 -     18090 I
e Balaenoptera_acutorostrata.KI537508.1                   15192790 3 +  23207421 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  5810 3 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             99039 3 -    100397 I
e Anoura_caudifer.AnoCau_scaffold_1412                      186428 22 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676558 3 -   2318259 I
e Ailurus_fulgens.LNAC01001112.1                             80727 6 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9511652 6 -  29979442 I
e Acinonyx_jubatus.LLWD01001279.1                           828365 6 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       7899 56 +     62944 GGCATTTGTCTGCACCAT-TCT-TT-------TA---gaaatt-aaca--t------ctg------t----aatg-gccc--acatt--------tga
s Acinonyx_jubatus.LLWD01001279.1                           828371 52 -   1699592 GGCACACATCAGCACTAT-TCC-TG-------CG---GATCAT-AACA--T------ATG------TCA--T--G-ATCT--A------------TCG
i Acinonyx_jubatus.LLWD01001279.1                        I 6 I 2
s Acomys_cahirinus.AcoCah_scaffold_12655                     71808 52 +     87051 ACAACCTACTTGAGTCAT-TTT-CT-------TG---AAACTT-AGGG--C------ATG------T--TAT--G-GCCC--A------------TCA
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 4 I 7
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511658 52 -  29979442 GGCACGTGTTTGCACCAT-TCC-TC-------TG---GAACAT-AATA--T------ATG------TCA--T--G-GTCT--A------------TCA
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 6 I 8
s Ailurus_fulgens.LNAC01001112.1                             80733 34 -    347723 ggtacatgtctgcaccat-tcc-tc-------tg---gaacat-aat---------------------------------------------------
i Ailurus_fulgens.LNAC01001112.1                         I 6 I 24
s Allactaga_bullata.AllBul_scaffold_9566                     75520 51 -     89534 ATCACTTGTCTATACCAT-TTT-TT------GGG---GAACTT-AACA--T------ATT------G--TAT--G-GCCT--A------------T--
i Allactaga_bullata.AllBul_scaffold_9566                 I 4 C 0
s Allenopithecus_nigroviridis.k141_3361533                   15827 55 -     52922 GGCATTAATCTGCACCAT-TCT-TT-------TA---GAACTT-AACA--T------CTG------T----TGTG-GCCC--A-ATT--------tga
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15747 55 -     28001 GGCATTAATCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TGTG-GCCC--A-ATT--------TGA
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          6245 55 -     18505 GGCATTAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TGTG-GCCC--A-ATT--------TGA
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           7097 55 -     12518 GGCATTAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TGTG-GCCC--A-ATT--------TGA
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              8666 35 +     51355 ----TTAGTCTGCACCAT-TCT-TT-------TA---GGATTT-AACG--T------ATG--------------------------------------
i Alouatta_belzebul.k141_3560514                         C 0 I 16
s Alouatta_caraya.k141_1701091                                1775 35 -     36483 ----TTAGTCTGCACCAT-TCT-TT-------TA---GGATTT-AACG--T------ATG--------------------------------------
i Alouatta_caraya.k141_1701091                           C 0 I 16
s Alouatta_discolor.k141_566626                              12227 35 +     28687 ----TTAGTCTGCACCAT-TCT-TT-------TA---GGATTT-AACG--T------ATG--------------------------------------
i Alouatta_discolor.k141_566626                          C 0 I 16
s Alouatta_juara.k141_1302312                                  740 35 +     27940 ----TTAGTCTGCACCAT-TCT-TT-------TA---GGATTT-AACG--T------ATG--------------------------------------
i Alouatta_juara.k141_1302312                            C 0 I 16
s Alouatta_macconnelli.k141_918386                            1784 35 -      9457 ----TTAGTCTGCACCAT-TCT-TT-------TA---GGATTT-AACG--T------ATG--------------------------------------
i Alouatta_macconnelli.k141_918386                       C 0 I 16
s Alouatta_nigerrima.k141_1929159                              740 35 +     30492 ----TTAGTCTGCACCAT-TCT-TT-------TA---GGATTT-AACG--T------ATG--------------------------------------
i Alouatta_nigerrima.k141_1929159                        C 0 I 16
s Alouatta_palliata.k141_2135620                              4735 35 +     47717 ----TTAGTCTGCACCAT-TCT-TT-------TA---GGATTT-AACG--T------ATG--------------------------------------
i Alouatta_palliata.k141_2135620                         C 0 I 16
s Alouatta_puruensis.k141_362188                              1467 35 +      5663 ----TTAGTCTGCACCAT-TCT-TT-------TA---GGATTT-AACG--T------ATG--------------------------------------
i Alouatta_puruensis.k141_362188                         C 0 I 16
s Alouatta_seniculus.k141_117119                             15919 35 +     50774 ----TTAGTCTGCACCAT-TCT-TT-------TA---GGATTT-AACG--T------GTG--------------------------------------
i Alouatta_seniculus.k141_117119                         C 0 I 16
s Ammotragus_lervia.NIVO01071767.1                          676561 52 -   2318259 ggcacttgtctgcttcat-tca-tt-------tg---gaatgc-aaca--t------gtg------c--cat--g-ttct--t------------cca
i Ammotragus_lervia.NIVO01071767.1                       I 3 I 2
s Anoura_caudifer.AnoCau_scaffold_1412                      186450 33 +    412891 --------------------cc-tt-------tg---aaatgg-agca--t------atG------TCA--T--G-GCCT--A------------TCA
i Anoura_caudifer.AnoCau_scaffold_1412                   I 22 I 2
s Antilocapra_americana.AntAmePen_scaffold_12469             99042 52 -    100397 GGCACTTGTCTGCTCCCT-TCA-TT-------TG---GAATGT-AACA--C------GTG------TCA--T--G-GCCT--G------------CCA
i Antilocapra_americana.AntAmePen_scaffold_12469         I 3 I 2
s Aotus_azarae.k141_3104676                                  16909 34 -     33861 GGCATGAGTCTGCACCAT-TCT-TT-------TA---GGATTT-AAA---------------------------------------------------
i Aotus_azarae.k141_3104676                              C 0 I 20
s Aotus_griseimembra.k141_2240599                            16906 34 -     34016 GGCATGAGTCTGCACCAT-TCT-TT-------TA---GGATTT-AAA---------------------------------------------------
i Aotus_griseimembra.k141_2240599                        C 0 I 20
s Aotus_nancymaae.KZ198451.1                               4299333 34 -   5030052 GGCATGAGTCTGCACCAT-TCT-TT-------TA---GGATTT-AAA---------------------------------------------------
i Aotus_nancymaae.KZ198451.1                             C 0 I 20
s Aotus_trivirgatus.k141_2152450                             16942 34 -     34685 GGCATGAGTCTGCACCAT-TCT-TT-------TA---GGATTT-AAA---------------------------------------------------
i Aotus_trivirgatus.k141_2152450                         C 0 I 20
s Aotus_vociferans.k141_344750                               30067 34 -     47192 GGCATGAGTCTGCACCAT-TCT-TT-------TA---GGATTT-AAA---------------------------------------------------
i Aotus_vociferans.k141_344750                           C 0 I 20
s Aplodontia_rufa.AprRuf_scaffold_68852                      13680 52 +     20879 GGACCTTGTCTACACCAT-TCT-GC-------TG---GAATTT-AACA--T------ACA------T--TAT--G-GTCC--A------------TGA
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 4 I 5
s Arctocebus_calabarensis.k141_1648548                         443 53 +      5281 GGCAT-TGTCTGCATCAT-ATT-TA-------TG---GAACTT-AATG--T------ATG------C-A--T--G-GCCT--A-AAT--------TGA
i Arctocebus_calabarensis.k141_1648548                   C 0 I 3
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5813 53 +     43469 GGCACTTGTTTGTACTATTTCA-TT-------TG---AAATGT-AGCA--T------GTG------TCA--T--G-GCCT--G------------TCA
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 3 I 2
s Balaenoptera_acutorostrata.KI537508.1                   15192793 52 +  23207421 GGCACTTGTGTGCCCCAT-TCC-TT-------TG---GAACAT-AATG--T------ATG------TCA--T--G-GCCt--g------------tca
i Balaenoptera_acutorostrata.KI537508.1                  I 3 I 2
s Balaenoptera_bonaerensis.DF707048.1                         3258 52 -     18090 GGCACTTGTGTGCCCCAT-TCC-TT-------TG---GAACAT-AATG--T------ATG------TCA--T--G-GCCt--g------------tca
i Balaenoptera_bonaerensis.DF707048.1                    I 3 I 2
s Beatragus_hunteri.BeaHun_scaffold_50177                    27483 52 +     34529 AGCACTTGTCTGCTTCAT-TCA-TT-------TG---GAATGC-AACA--T------GTG------CCA--T--G-GCCT--T------------CCA
i Beatragus_hunteri.BeaHun_scaffold_50177                I 3 I 2
s Bison_bison.KN261452.1                                    200541 52 -    288883 ggcacttgtctgcttcat-tca-tt-------tg---gaatgc-aaca--t------gtG------TCA--T--G-GCCT--t------------cca
i Bison_bison.KN261452.1                                 I 3 I 2
s Bos_indicus.CM003047.1                                  20273745 52 +  48749331 ggcacttgtctgcttcat-tca-tt-------tg---gaatgc-aaca--t------gtG------TCA--T--G-GCCT--t------------cca
i Bos_indicus.CM003047.1                                 I 11 I 80
s Bos_mutus.JH880303.1                                     1126301 52 -   1948126 ggcacttgtctgcttcat-tca-tt-------tg---gaatgc-aaca--t------gtG------TCA--T--G-GCCT--t------------cca
i Bos_mutus.JH880303.1                                   I 3 I 2
s Bos_taurus.CM000203.6                                   18084383 52 +  45695690 ggcacttgtctgcttcat-tca-tt-------tg---gaatgc-aaca--t------gtG------TCA--T--G-GCCT--t------------cca
i Bos_taurus.CM000203.6                                  I 11 I 80
s Bubalus_bubalis.KI419123.1                               2820051 52 +   4408762 ggcacttgtctgcatcat-tca-tt-------tg---gaatgc-aaca--t------gtg------c--cat--g-gcct--t------------CCa
i Bubalus_bubalis.KI419123.1                             I 3 I 2
s Callibella_humilis.k141_10318                                703 20 +     27907 --------------tctg-tct-tt-------ta---agattt-aac---------------------------------------------------
i Callibella_humilis.k141_10318                          N 0 I 23
s Callimico_goeldii.k141_737284                                327 34 -     31217 GGCATTAGTCAGCACCAT-TCT-TT-------TA---AGATTT-AAC---------------------------------------------------
i Callimico_goeldii.k141_737284                          C 0 I 23
s Callithrix_geoffroyi.k119_69176                              625 34 +      5377 GGCATTAGTCAGCACCAT-GCT-TT-------TA---AGATTT-AAC---------------------------------------------------
i Callithrix_geoffroyi.k119_69176                        C 0 I 23
s Callithrix_jacchus.pat_scaffold_3                       23592486 34 - 189096842 GGCATTAGTCAGCACCAT-GCT-TT-------TA---AGATTT-AAC---------------------------------------------------
i Callithrix_jacchus.pat_scaffold_3                      C 0 I 23
s Callithrix_kuhlii.k119_1168854                              1300 34 -     12329 GGCATTAGTCAGCACCAT-GCT-TT-------TA---AGATTT-AAC---------------------------------------------------
i Callithrix_kuhlii.k119_1168854                         C 0 I 23
s Camelus_bactrianus.KN276810.1                           10003311 51 -  17673402 AGCACTTGTCTGCCTCAT-TCC-TT-------CG---GTGCGT-AACA--T------ATG------TCA--T--G-GCCt--a------------tt-
i Camelus_bactrianus.KN276810.1                          I 3 I 28
s Camelus_dromedarius.KN272107.1                           2335787 51 -   7040546 AGCACTTGTCTGCCTCAT-TCC-TT-------CG---GTGCGT-AACA--T------ATG------TCA--T--G-GCCt--a------------tt-
i Camelus_dromedarius.KN272107.1                         I 3 I 28
s Camelus_ferus.KB017975.1                                  404086 51 -   1652518 AGCACTTGTCTGCCTCAT-TCC-TT-------CG---GTGCGT-AACA--T------ATG------TCA--T--G-GCCt--a------------tt-
i Camelus_ferus.KB017975.1                               I 3 I 28
s CanFam4.chr16                                           17800243 52 -  60362399 ggcacatgtctgtaccat-tcc-tc-------ta---gaacat-agta--t------atg------t--cat--g-gtct--a------------tca
i CanFam4.chr16                                          I 6 I 8
s Canis_lupus_VD.CanFam_VD_scaffold_27089                      991 52 -     43241 ggcacatgtctgtaccat-tcc-tc-------ta---gaacat-agta--t------atg------t--cat--g-gtct--a------------tca
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 6 I 8
s Canis_lupus_dingo.QKWQ01000480.1                         9035686 52 -   9314153 ggcacatgtctgtaccat-tcc-tc-------ta---gaacat-agta--t------atg------t--cat--g-gtct--a------------tca
i Canis_lupus_dingo.QKWQ01000480.1                       I 6 I 8
s Canis_lupus_familiaris.chr16                            17960162 52 -  59632846 ggcacatgtctgtaccat-tcc-tc-------ta---gaacat-agta--t------atg------t--cat--g-gtct--a------------tca
i Canis_lupus_familiaris.chr16                           I 6 I 8
s Canis_lupus_orion.HG994398.1                            18501459 52 +  63665305 ggcacatgtctgtaccat-tcc-tc-------ta---gaacat-agta--t------atg------t--cat--g-gtct--a------------tca
i Canis_lupus_orion.HG994398.1                           I 6 I 8
s Capra_aegagrus.CM003241.1                               18830679 52 +  46296322 ggcacttgtctgcttcat-tca-tt-------tg---gaatgc-aaca--t------gtg------c--cgt--g-ttct--t------------cca
i Capra_aegagrus.CM003241.1                              I 3 I 2
s Capra_hircus.CM004588.1                                 18061399 52 -  44709034 GGCACTTGTCTGCTTCAT-TCA-TT-------TG---GAATGC-AACA--T------GTG------C--CGT--G-TTCT--t------------cca
i Capra_hircus.CM004588.1                                I 3 I 2
s Capromys_pilorides.CapPil_scaffold_65020                    2066 51 -     12242 CACATTTATCTGCAGCAC-TCT-TT-------TG---AAACTT-CATA--T------ATA------T--TAT--T-GCC---A------------ACA
i Capromys_pilorides.CapPil_scaffold_65020               I 4 I 2
s Carollia_perspicillata.CarPer_scaffold_92756                6182 53 -     11696 GGCACTTGTCTGTACTATTTCA-TT-------TG---AAATGT-AACA--T------ATG------TCA--T--G-GCCT--A------------CCA
i Carollia_perspicillata.CarPer_scaffold_92756           I 3 I 2
s Castor_canadensis.CasCan_scaffold_2074                    138358 48 +    179628 gccacttgtttgcaccat-ttc-tt-------tg---gaattc-aaca--g------ttg------t--tct--g-gccc------------------
i Castor_canadensis.CasCan_scaffold_2074                 I 4 I 7
s Catagonus_wagneri.CatWag_scaffold_2839                     94612 51 +    217609 GGCACTTGTCTGCCCCAT-TCC--T-------TG---GAAGGT-AACA--T------AGG------TCA--T--G-GCCT--A------------TTG
i Catagonus_wagneri.CatWag_scaffold_2839                 I 3 I 2
s Cebuella_niveiventris.k141_1251222                         11226 31 -     11392 GGCATTAGTCAGCACCAT-TCT-TTTTTTTTCt-----------------------------------------------------------------
i Cebuella_niveiventris.k141_1251222                     C 0 N 0
s Cebuella_pygmaea.k141_1309012                               7410 24 -      7577 GGCATTAGTCAGCACCAT-TTT-TT-------T-----------------------------------------------------------------
i Cebuella_pygmaea.k141_1309012                          C 0 N 0
s Cebus_albifrons.Contig27                                25653836 35 +  26074798 GGCGTTAGTCTGCACCAT-TCT-TT-------TA---GGATTT-AACA--------------------------------------------------
i Cebus_albifrons.Contig27                               C 0 I 18
s Cebus_olivaceus.k141_1764483                                1774 35 +     28840 GGCGTTAGTCTGCACCAT-TCT-TT-------TA---GGATTT-AACA--------------------------------------------------
i Cebus_olivaceus.k141_1764483                           C 0 I 18
s Cebus_unicolor.k141_1837183                                 1503 35 +     14051 GGCGTTAGTCTGCACCGT-TCT-TT-------TA---GGATTT-AACA--------------------------------------------------
i Cebus_unicolor.k141_1837183                            C 0 I 18
s Cercocebus_atys.KQ010504.1                               4476764 55 +   4669795 GGCATTCATCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TGTG-GCCC--A-att--------tga
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        1266 55 +     17872 GGCATTCATCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TGTG-GCCC--A-ATT--------TGA
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           1855 55 -     14043 GGCATTCATCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TGTG-GCCC--A-ATT--------TGA
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                           9956 55 +     27781 GGCATTCATCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TGTG-GCCC--A-ATT--------TGA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        10124 55 -     20310 GGCATTAATCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TGTG-GCCC--A-ATT--------TGA
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          13104 55 +     29689 GGCATTAATCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TGTG-GCCC--A-ATT--------TGA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7850 55 -     20078 GGCATTAATCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TGTG-GCCC--A-ATT--------TGA
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          15772 55 -     27936 GGCATTAATCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TGTG-GCCC--A-ATT--------TGA
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            4638 55 -     17152 GGCATTAATCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TGTG-GCCC--A-ATT--------TGA
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38818183 55 +  39242232 GGCATTAATCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TGTG-GCCC--A-ATT--------TGA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223872 55 -  21565898 GGCATTAATCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TGTG-GCCC--A-ATT--------TGA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       40991 55 -     53127 GGCATTAATCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TGTG-GCCC--A-ATT--------TGA
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        1242 55 +     13442 GGCATTAATCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TGTG-GCCC--A-ATT--------TGA
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15791 55 -     27947 GGCATTAATCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TGTG-GCCC--A-ATT--------TGA
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         15767 55 +     17596 GGCATTAATCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TGTG-GCCC--A-ATT--------TGA
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          1810 55 +     14005 GGCATTAATCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TGTG-GCCC--A-ATT--------TGA
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1527 51 -      8501 GTCACTTGTCTGCACCAT-TC--TT-------TG---GAAGCT-AGAA--G------ATG------G-A-CT--GGTT-G--A------------CGA
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       I 3 I 2
s Chinchilla_lanigera.JH722012.1                           1253943 52 +   2543920 AACATTTATGTGCACCAC-TCT-TC-------TG---AAACTT-CACA--T------ATG------T--CGT--G-GCCC--A------------ACA
i Chinchilla_lanigera.JH722012.1                         I 4 I 6
s Chiropotes_albinasus.k141_2206961                           2110 53 -     15524 AGCATTAGTCAGCACCAT-CCT-TT-------TA---GGATTG-AACA--T------GTT------T----C--G-GCCA--C-ACT--------TGA
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18429749 55 -  18827391 GGCACTAATCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TGTG-GCCC--A-ATT--------TGA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       16185 55 -     50209 GGCACTAATCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TGTG-GCCC--A-ATT--------TGA
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135423186 55 + 135778131 GGCACTAATCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TGTG-GCCc--a-att--------tga
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1911664 55 +   2368649 GGCATCAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TATG-GCCc--a-att--------tga
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949916 55 + 200372422 GGCATCAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TATG-GCCC--A-ATT--------TGA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              38198 55 +     84244 GGCATCAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TATG-GCCC--A-ATT--------TGA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549114 50 -  53390261 -GGACT-CCCAGCGCCAT-TCC-AG-------TG---GAACTT-AATA--C------TCA------C--TGC--T-GTCA--G------------TCC
i Condylura_cristata.JH655891.1                          I 2 I 2
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1549 58 +     23735 GACCCTTGTCTGCACCAT-TCC-TT-------TG---GAATGT-AACA--TACATGTATG------TCA--T--G-GCTT--A------------TCA
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      I 3 I 2
s Cricetomys_gambianus.CriGam_scaffold_18520                 51087 51 +     63868 ACAACTTAG-CGCATCAT-TTT-CT-------TG---GAACTT-AAAA--C------ACA------T--TAT--G-ACGT--G------------TCA
i Cricetomys_gambianus.CriGam_scaffold_18520             I 4 I 7
s Cricetulus_griseus.LT883664.1                           11668566 17 + 224834208 ACTACTTATTTACATCA---------------------------------------------------------------------------------
i Cricetulus_griseus.LT883664.1                          I 4 I 7
s Crocidura_indochinensis.CroInd_scaffold_37019               4000 34 -     19598 GGCAATTGCCCA--CCTT-TCT--T-------TG---ACATAT-ATCA--T------G----------------------------------------
i Crocidura_indochinensis.CroInd_scaffold_37019          I 3 I 17
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29554 52 -     87169 GGCACATGGCAGCACCAT-TCC-TG-------TG---GATCAT-AACA--T------ATG------TCA--T--G-ATCT--A------------TCC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 6 I 2
s Ctenodactylus_gundi.CteGun_scaffold_65                    838132 52 +   1526836 AGCCTTTGTCTGCACCGT-TCT-TT-------TA---AAACTT-GACA--C------TTG------CCA--T--G-ACCT--C------------TCA
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 4 I 6
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  36932 52 +     51376 CACATTTATCTGCAGCAA-TCT-TT-------TG---AAACTT-CACA--T------ATA------TCA--T--A-GCCC--A------------CCA
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 4 I 2
s Dasypus_novemcinctus.JH564415.1                            64544 51 +   2246927 GGCACGTGCCTGCACCAT-TCC-TT-------TG---GAACCT-GGGA--T------ACG------G--TAT--T-GT-T--A------------TGA
i Dasypus_novemcinctus.JH564415.1                        I 3 I 2
s Delphinapterus_leucas.KZ290073.1                        16812431 52 +  35494412 ggcacttgtgtgccccat-tcc-tt-------tg---gaacat-aatg--t------atg------t--cat--g-gcct--g------------tca
i Delphinapterus_leucas.KZ290073.1                       I 3 I 2
s Desmodus_rotundus.KZ672289.1                             8631179 53 +  20541912 GGCACTTGTCTGTACTATTTCC-TT-------TG---AAATGT-CATA--T------ATG------TCA--T--G-GCCT--C------------TCA
i Desmodus_rotundus.KZ672289.1                           I 3 I 2
s Dinomys_branickii.DinBra_scaffold_21862                    37416 52 +     67921 ACCATTTATCCGCACCAT-TCT-TT-------TG---AAACTT-CACA--T------ACA------TCA--T--G-GCCC--A------------ACA
i Dinomys_branickii.DinBra_scaffold_21862                I 2 I 6
s Echinops_telfairi.JH980293.1                            48781846 35 + 111700974 GGTACTT-TCTGCAGCAT-TCC-TT-------TGCTAA--------AC--T------ATT------T-------------------------------
i Echinops_telfairi.JH980293.1                           I 6 I 13
s Eidolon_helvum.KE759718.1                                  11615 52 +     11740 ggcactggtctgcactat-tcc-tt-------tg---gAATGT-AACA--G------ATG------TCA--C--A-ACCT--G------------TCG
i Eidolon_helvum.KE759718.1                              I 3 I 2
s Elaphurus_davidianus.JRFZ01104969.1                       311715 52 +    607251 GGCACTTGTCTGCTCCGT-TCG-TC-------TG---GAATGC-AACA--T------GTG------TCA--T--G-GCCT--G------------cca
i Elaphurus_davidianus.JRFZ01104969.1                    I 3 I 2
s Ellobius_lutescens.LOEQ01008920.1                          21545 49 -    110024 ACAACTTATTTGCATCAT-TTT-CT-------TG---GAATTT-AACA--C------G--------T--TAT--G-GCTT--a------------tc-
i Ellobius_lutescens.LOEQ01008920.1                      I 4 I 8
s Ellobius_talpinus.LOJH01081419.1                            1451 49 +      8657 ACAACTTATTTGCATCAT-TTT-CT-------TG---GAATTT-AACA--T------G--------T--TAT--G-GCTT--A------------Tc-
i Ellobius_talpinus.LOJH01081419.1                       I 4 I 8
s Enhydra_lutris.KZ291758.1                               16330686 52 -  41312741 GGAACAAGTCTGCACCAT-TCC-TC-------TG---GAATAA-AATA--T------ATG------TCA--T--G-GTCT--A------------TCA
i Enhydra_lutris.KZ291758.1                              I 6 I 8
s Eptesicus_fuscus.JH977646.1                              2146796 50 -  14770903 GACACTTGTCTGTGTCAT-TTC-TT-------TC---ATATGT-AACATAT--------G------TCA--T--G-GCTT--A------------T--
i Eptesicus_fuscus.JH977646.1                            I 3 I 16
s Erinaceus_europaeus.JH835339.1                           3329292 33 -   7059049 --------------------CC-TT-------TG---TAACTT-AACA--T------GTG------GCA--T--G-GCAT--A------------TCA
i Erinaceus_europaeus.JH835339.1                         C 0 I 11
s Erythrocebus_patas.Contig38                             21206354 56 -  21539334 GGCATTAGTCTGCACCAT-TCT-TT-------TA---GAATTTTAACA--T------CTG------T----TGTG-GCCC--A-ATT--------TGA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12105 52 +    133382 ggcacttgtgtgccccat-tcc-tt-------tg---gaacat-aatg--t------atg------t--cat--g-gcct--g------------tca
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 3 I 2
s Eubalaena_japonica.EubJap_flattened_line_31514             26042 52 -     44125 GGCACTTGTGTGCCCCAT-TCC-TT-------TG---GAACAT-AATG--T------ACg------t--cat--g-gcct--g------------tca
i Eubalaena_japonica.EubJap_flattened_line_31514         I 3 I 2
s Felis_catus.CM001381.2                                  20238013 52 + 206538554 GGCACACATCAGCACTAT-TCC-TG-------TG---GATCAT-AACA--T------ATG------TCA--T--G-ATCC--A------------TCG
i Felis_catus.CM001381.2                                 I 6 I 2
s Felis_catus_fca126.CM031415.1                           20196856 52 + 205367284 GGCACACATCAGCACTAT-TCC-TG-------TG---GATCAT-AACA--T------ATG------TCA--T--G-ATCC--A------------TCA
i Felis_catus_fca126.CM031415.1                          I 6 I 2
s Felis_nigripes.FelNig_flattened_line_20823                 10610 52 -     36744 GGCACACATCAGCACTAT-TCC-TG-------TG---GATCAT-AACA--T------ATG------TCA--T--G-ATCC--A------------TCG
i Felis_nigripes.FelNig_flattened_line_20823             I 6 I 2
s Fukomys_damarensis.KN121974.1                             851459 49 +   3816255 ---ATCTGTCTGCACCAT-TCT-TC-------TG---AAACTT-CACA--T------ATG------T--TAT--G-ACCC--A------------AGA
i Fukomys_damarensis.KN121974.1                          C 0 I 6
s Galago_moholi.ctg2040                                     429615 53 -    453645 GGCAT-TGTCTGCATCAT-GCT-TA-------TG---GAACTT-AATA--T------ATG------C-A--T--G-GCCT--A-AAT--------TGG
i Galago_moholi.ctg2040                                  C 0 I 3
s Galago_senegalensis.k141_631886                             7305 53 +     11339 GGCAT-TGTCTGCATCAT-GCT-TA-------TG---GAACTT-AATA--T------ATG------C-A--T--G-GCCT--A-AAC--------TGG
i Galago_senegalensis.k141_631886                        C 0 I 3
s Galagoides_demidoff.k141_1711393                            4594 53 +     41679 GGCAT-TGTCTGCATCAT-GCT-TA-------TG---GAACTT-AATA--T------ATA------C-A--T--G-GCCT--A-AAT--------TGA
i Galagoides_demidoff.k141_1711393                       C 0 I 3
s Galeopterus_variegatus.GalVar_scaffold_108840               2256 51 -      9135 tgcatttgtctgcaccat-tct-tt-------ta---gaattt-agca--t------atg------t--tat--g--cct--A------------TCA
i Galeopterus_variegatus.GalVar_scaffold_108840          I 3 I 3
s Giraffa_tippelskirchi.LVKQ01S007888.1                     609680 52 -    660261 GGCACTTGTCTGCTCCAT-TTG-TT-------TG---GAATGT-AACG--T------GTG------TCA--T--G-GCCT--G------------cca
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 3 I 2
s Gorilla_beringei.k141_3596273                              17156 56 -     32273 GGCATTCATCTGCACCAT-TCT-TT-------TA---GACATT-AACA--T------CTG------T----AATG-GCCC--ACACT--------TGA
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186339291 56 + 186649187 GGCATTCATCTGCACCAT-TCT-TT-------TA---GACATT-AACA--T------CTG------T----AATG-GCCC--Acact--------tga
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33696 24 +     78134 ----------------------------------------CCT-AACA--A------ATG------T--TAT--G-AACC--A------------TCT
i Graphiurus_murinus.GraMur_scaffold_10447               I 32 I 6
s Helogale_parvula.HelPar_flattened_line_2585               243393 52 +    327341 GACACACGTCAGCACCAT-TCC-TG-------TG---AATCGT-AACA--T------ATG------TCA--T--G-ATCT--A------------TCA
i Helogale_parvula.HelPar_flattened_line_2585            I 6 I 2
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18884 52 +     36099 GGCACTTGTCTGCTTCAT-TTA-TT-------TG---GAATGC-AACA--T------GTG------CCA--T--G-GCCT--T------------CCA
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 3 I 2
s Heterocephalus_glaber.JH602082.1                        20663230 49 +  22651954 ---ACTTCTCTGCAAGAT-TCT-TT-------TG---AAACTT-CATA--T------ATG------T--TAC--G-GCCC--A------------ACA
i Heterocephalus_glaber.JH602082.1                       I 7 I 6
s Heterohyrax_brucei.HetBruBak_scaffold_122365                3323 14 +      7595 ---------------------------------A---GGACCT-AACA--T------A--------T-------------------------------
i Heterohyrax_brucei.HetBruBak_scaffold_122365           I 24 I 14
s Hipposideros_armiger.JXIK01000431.1                       111575 48 +   1711038 GGC-CTTGTCTGTA---T-ACC-TT-------TG---GAATGT-AACG--T------GCA------TCA--T--G-GCCT--A------------TCA
i Hipposideros_armiger.JXIK01000431.1                    I 3 I 2
s Hipposideros_galeritus.HipGal_scaffold_29171               43009 51 +     43066 GGC-CTTGTCTGTACCAC-ACC-TT-------TG---GAACGT-AACA--T------GCA------TCA--T--G-GCTT--A------------TCA
i Hipposideros_galeritus.HipGal_scaffold_29171           I 3 N 0
s Hoolock_leuconedys.ctg274                                    435957 56 +    630532 GGCATTCCTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TATG-GCCC--acatt--------tga
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46096 28 +     55795 GGCACATGTCA-CATCAT-TCC-T--------TG---GATCA--------------------------------------------------------
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 6 I 19
s Hystrix_cristata.HysCri_scaffold_5660                      84110 52 +    135385 AGCATTTGTCTACACCAT-TCT-TT-------TG---AAACTT-GACG--T------ATG------TCA--C--G-GCCC--A------------ACA
i Hystrix_cristata.HysCri_scaffold_5660                  I 4 I 6
s Ictidomys_tridecemlineatus.JH393364.1                    7522013 52 -   7955117 GCACCTTGTCTGCACAAA-TCT-GC-------TG---GAATTT-AGCA--T------ATA------T--TAT--G-ACCC--A------------GCA
i Ictidomys_tridecemlineatus.JH393364.1                  I 4 I 6
s Inia_geoffrensis.IniGeo_flattened_line_48101               23646 52 +     23964 GGCACTTGTGTGCCCCAT-TCC-TT-------TG---GAACAT-AATG--T------ATG------TCA--T--G-GCCT--G------------TCA
i Inia_geoffrensis.IniGeo_flattened_line_48101           I 3 I 2
s Jaculus_jaculus.JH725527.1                               8278182 51 -   9596543 ATCACTTGTCTATAACGT-TTT-TG------GGG---GAACCT-AGCA--T------ACT------G--TAT--G-AACT--A------------T--
i Jaculus_jaculus.JH725527.1                             I 4 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                3003 52 -      3359 GGCACTTGTGTGCCCCAT-TCC-TT-------TG---GAACAT-AATG--T------ATG------TCA--T--G-GCCT--G------------TCa
i Kogia_breviceps.KogBre_flattened_line_192630           I 3 I 2
s Lasiurus_borealis.LasBor_scaffold_32767                    17452 50 -     42476 GACACTTGTCTGTATCAT-TCC-TT-------TC---CTATGT-AACATAT--------G------TCA--T--G-GCTT--A------------T--
i Lasiurus_borealis.LasBor_scaffold_32767                I 3 I 16
s Leontocebus_fuscicollis.k141_1820339                        9065 34 +     64341 AGCATTAGTCAGCACCAT-TCT-TT-------TA---GGATTG-AAC---------------------------------------------------
i Leontocebus_fuscicollis.k141_1820339                   C 0 I 19
s Leontocebus_illigeri.k141_1304848                           1405 34 -     35062 AGCATTAGTCAGCACCAT-TCT-TT-------TA---GGATTG-AAC---------------------------------------------------
i Leontocebus_illigeri.k141_1304848                      C 0 I 19
s Leontocebus_nigricollis.k141_4610752                        9092 34 +     35603 AGCATTAGTCAGCACCAT-TCT-TT-------TA---GGATTG-AAC---------------------------------------------------
i Leontocebus_nigricollis.k141_4610752                   C 0 I 19
s Leontopithecus_chrysomelas.k141_1519602                    30705 34 +     38576 GGCATTAGTCAGCACCAT-TCT-TT-------TA---AGATTT-AAC---------------------------------------------------
i Leontopithecus_chrysomelas.k141_1519602                C 0 I 23
s Leontopithecus_rosalia.k141_464620                         27409 34 +     66356 GGCATTAGTCAGCACCAT-TCT-TT-------TA---AGATTT-AAC---------------------------------------------------
i Leontopithecus_rosalia.k141_464620                     C 0 I 23
s Leptonychotes_weddellii.KB714746.1                       3044139 52 +   3914936 ggtacatgtctgcaccgt-tcc-tc-------tg---gAACAT-AGCA--T------ATG------T--TAT--G-GTCT--A------------TCA
i Leptonychotes_weddellii.KB714746.1                     I 6 I 8
s Lepus_americanus.LepAme_scaffold_107385                     7806 30 -     14121 GGCTCCCGTCTGCACCAT-TCT-CT-------TG---GAACA--------------------------------------------------------
i Lepus_americanus.LepAme_scaffold_107385                I 4 I 34
s Lipotes_vexillifer.KE559953.1                             268697 52 -    662738 ggcacttgtgtgccccat-tcc-tt-------tg---gaacat-aatg--t------atg------t--cat--g-gcct--g------------tca
i Lipotes_vexillifer.KE559953.1                          I 3 I 2
s Lophocebus_aterrimus.ctg367                              1438307 55 +   1826925 GGCATTAATCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TGTG-GCCC--A-ACT--------TGA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_399337                            17639 53 -     33856 GGCAT-TGTCTGCATCAT-GCT-TC-------TG---AAACTT-AACA--T------ATG------C-A--T--G-GCCT--A-AAT--------TGA
i Loris_lydekkerianus.k141_399337                        C 0 I 3
s Loris_tardigradus.ctg83                                  1015350 53 +   6120653 GGCAT-TGTCTGCATCAT-GCT-TC-------TG---AAACTT-AACA--T------ATG------C-A--T--G-GCCT--A-AAT--------TGA
i Loris_tardigradus.ctg83                                C 0 I 3
s Loxodonta_africana.GL010049.1                            4219635 18 -  43346337 GGCACGT-TCTGCTCCAT-T------------------------------------------------------------------------------
i Loxodonta_africana.GL010049.1                          I 6 I 30
s Lycaon_pictus.CM007581.1                                17956402 52 -  59628241 ggcacatgtctgtaccat-tcc-tc-------ta---gaacat-agta--t------atg------t--cat--g-gtct--a------------tca
i Lycaon_pictus.CM007581.1                               I 6 I 8
s Macaca_arctoides.k141_2326796                               8122 55 +     40492 GGCATTAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TGTG-GCCC--A-ATT--------TGA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59677381 55 +  60120075 GGCATTAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TGTG-GCCC--A-ATT--------tga
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13897 55 -     26193 GGCATTAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TGTG-GCCC--A-att--------tga
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            81677 55 -    114318 GGCATTAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TGTG-GCCC--A-ATT--------TGA
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  7368 55 -     23192 GGCATTAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TGTG-GCCC--A-ATT--------TGA
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16830 55 -     29190 GGCATTAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TGTG-GCCC--A-ATT--------TGA
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  25406 55 +     37952 GGCATTAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TGTG-GCCC--A-att--------tga
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186840495 55 + 187317192 GGCATTAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TGTG-GCCc--a-att--------tga
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25459047 55 -  25927173 GGCATTAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TGTG-GCCc--a-att--------tga
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  81254 55 +     89720 GGCATTAGTCTGCACCAT-TCT-Tt-------ta---gaattt-aaca--t------ctg------t----tgtg-gccc--a-att--------tga
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 8255 55 +     20474 GGCATTAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TGTG-GCCC--A-ATT--------TGA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   8044 55 -     14993 GGCATTAGTCTGCACCAT-TCT-TT-------TA---GAattt-aaca--t------ctg------t----tgtg-gccc--a-att--------tga
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  330910 55 -    668171 GGCATTAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------ctg------t----tgtg-gccc--a-att--------tga
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 6368 55 -     24072 GGCGTTAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TGTG-GCCC--A-ATT--------TGA
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               26993 55 -     45290 GGCATTAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TGTG-Gccc--a-att--------tga
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91708 52 +     94391 ggcacttgtctgcactat-tcc-tt-------tg---gaatgt-aaca--t------atg------t--cat--g-acct--g------------tca
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 3 I 2
s Mandrillus_leucophaeus.scaffold280                      23938584 55 -  24302211 GGCATTAATCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TGTG-GCCC--A-ATT--------TGA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352706 55 +    752769 GGCATTAATCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TGTG-GCCC--A-ATT--------TGA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              19334 47 +    737560 GGCACATGTCTGCACCAT-TCC-TT-------TG---GAA------CA--T------ATG------TCA--A--G-GTTT--G------------TCA
i Manis_javanica.JSZB01003497.1                          I 6 I 2
s Manis_pentadactyla.KN006162.1                              51320 47 -    317179 GGCACATGTCTGCACCAT-TCC-TT-------TG---GAA------CA--T------ATG------TCA--A--G-GTTT--G------------TCA
i Manis_pentadactyla.KN006162.1                          I 6 I 2
s Marmota_marmota.CZRN01000018.1                          33104300 52 -  40650429 ATTCCTTGTCTATACAAA-TCT-GC-------TG---GAATTT-AGCA--T------ATA------T--TAT--G-ACCC--A------------GCA
i Marmota_marmota.CZRN01000018.1                         I 4 I 6
s Megaderma_lyra.MegLyr_scaffold_4542                        14437 24 -    207569 ----------------------------------------TGT-AACG--T------AGG------TCA--T--G-GCCG--A------------TCA
i Megaderma_lyra.MegLyr_scaffold_4542                    I 21 I 2
s Mellivora_capensis.MelCap_flattened_line_69365             11402 52 +     13704 GGTACATGTCTGCACCAT-TCC-TC-------TG---GAACAT-AATA--T------ATG------TCA--T--G-GTCT--A------------TCA
i Mellivora_capensis.MelCap_flattened_line_69365         I 6 I 8
s Meriones_unguiculatus.MerUng_scaffold_7390                 33773 50 +    140813 ACAACTTACTCGCATCAT-CTT-CT-------TG---GAATTT-GA----C------ATG------T--TCT--G-GCCC--A------------TCA
i Meriones_unguiculatus.MerUng_scaffold_7390             I 4 I 7
s Mesocricetus_auratus.KB708134.1                         12183228 50 -  29670104 ACaatttatttacatcat-ttc--t-------tg---GAACTT-AGCA--C------A--------TGATAT--G-GCCT--A------------TC-
i Mesocricetus_auratus.KB708134.1                        I 4 I 8
s Mesoplodon_bidens.MesBid_scaffold_108144                    4314 52 +     10310 GGCACTTGTGTGCACCAT-TCC-TT-------TG---GAACAT-AATG--T------ATG------TCA--T--G-GCCT--G------------TCA
i Mesoplodon_bidens.MesBid_scaffold_108144               I 3 I 2
s Mico_humeralifer.k141_1346949                                773 19 +      1399 ---------------------------------------------------------atg------t--TAC--A-GCCA--C-ATT--------TGA
i Mico_humeralifer.k141_1346949                          N 0 I 4
s Mico_argentatus.k141_1239457                                7222 19 -      7380 GGCATTAGTCAGTACCAT-t------------------------------------------------------------------------------
i Mico_argentatus.k141_1239457                           C 0 N 0
s Mico_schneideri.k141_1950671                                      7195 19 -      7356 GGCATTAGTCAGTACCAT-T------------------------------------------------------------------------------
i Mico_schneideri.k141_1950671                                 C 0 N 0
s Microgale_talazaci.MicTal_scaffold_6613                    24558 35 -    145209 GGTACTT-TCTGCAGCAG-TCC-TT-------TGCTAA--------GA--T------GTG------T-------------------------------
i Microgale_talazaci.MicTal_scaffold_6613                I 6 I 14
s Micronycteris_hirsuta.MicHir_scaffold_52381                16932 36 -     19307 GGCATTTGTCTGTACTATTTCA-TT-------TG---AAATGC-GACA--------------------------------------------------
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 3 I 17
s Microtus_ochrogaster.CM001695.1                         11261530 48 -  27267610 ACAACTTATTTGCATCAA-TTT--T-------TG---GAATTT-AACA--C------A--------T--TAT--G-GCTT--A------------TT-
i Microtus_ochrogaster.CM001695.1                        I 4 I 7
s Miopithecus_ogouensis.k141_534055                          10270 55 -     28506 GGCATTAATCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TGTG-GCCC--A-ATT--------TGA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         7006 52 -      8324 GGTACATGTCTGCACCGT-TCC-TC-------TG---GAACAT-AGCA--T------ATG------T--TAT--G-GTCT--A------------TCA
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 6 I 8
s Monodon_monoceros.MonMon_M_scaffold_103                    27820 52 -    437263 ggcacttgtgtgccccat-tcc-tt-------tg---gaacat-aatg--t------atg------t--cat--g-gcct--g------------tca
i Monodon_monoceros.MonMon_M_scaffold_103                I 3 I 2
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142721 53 -    366855 GGCACTTGTCTGCACTATTTCC-TT-------CG---AAATGG-AACA--C------ATG------TCA--T--G-GCCT--A------------CCA
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 3 I 2
s Moschus_moschiferus.MosMos_scaffold_13123                   1761 52 +     82753 ggcacttgcctgtttcat-tca-tt-------tg---gaatgt-aaca--t------gtG------TCA--T--G-GCCT--G------------CCA
i Moschus_moschiferus.MosMos_scaffold_13123              I 3 I 2
s Murina_feae.MurFea_scaffold_85699                           7899 50 +     14753 GACACTGGTCTGTACCAT-TCC-TT-------TC---ATATGT-AACAGAT--------G------TCA--T--G-GTCT--A------------T--
i Murina_feae.MurFea_scaffold_85699                      I 3 I 16
s Mus_caroli.LT608237.1                                   84362389 52 - 120012414 ACAACTTACGTGCATCAT-TTT-CT-------TG---GAACGT-AACA--C------ATG------T-A-AT--G-ACCC--A------------TCA
i Mus_caroli.LT608237.1                                  I 4 I 7
s Mus_musculus.chr8                                       87651380 46 - 129401213 ------TATGTGCATCAT-TTT-CT-------TG---GAACGT-AACA--C------ATG------T-A-AT--G-ACCC--A------------TCA
i Mus_musculus.chr8                                      I 2 I 7
s Mus_pahari.LT608297.1                                   31356036 48 -  89631738 AAAACTT----GCATCAT-TTT-CT-------TG---CAAAGT-AACA--C------ATA------T-A-AT--G-ACCc--a------------tca
i Mus_pahari.LT608297.1                                  I 4 I 7
s Mus_spretus.CM004101.1                                  90753443 46 - 130317789 ------TATGTGCATCAT-TTT-CT-------TG---GAACGT-AACA--C------GTG------T-A-AT--G-ACCC--A------------TCA
i Mus_spretus.CM004101.1                                 I 2 I 6
s Mustela_putorius.JH418006.1                               302795 52 -  14710649 GGAACATGTCTGCATCAT-TCC-TC-------TG---GAACAT-AATA--T------ATG------TCA--T--G-GTCT--A------------TCa
i Mustela_putorius.JH418006.1                            I 6 I 8
s Myocastor_coypus.MyoCoy_scaffold_10123                     72248 52 -     80779 CACGTTTATCTGCAGCAT-TCA-TT-------TG---AAACTT-CGTA--T------ATG------T--TAT--A-GCAC--A------------ATG
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 4 I 2
s Myotis_brandtii.KE162005.1                                281541 50 -  10118263 GACACTTGTCTGTACCAT-TCC-TT-------TC---ATATGT-AACATAT--------G------TCA--T--G-GCCT--A------------T--
i Myotis_brandtii.KE162005.1                             I 3 I 16
s Myotis_davidii.KB100139.1                                1588796 50 -   6019432 GACACTTGTCTGTGCCAT-TCC-TT-------TC---ATATGT-AACATAT--------G------TCA--T--G-GCCT--A------------T--
i Myotis_davidii.KB100139.1                              I 3 I 16
s Myotis_lucifugus.GL429869.1                              3904893 50 -   4330536 GACACTTGTCTGTGCCAT-TCC-CT-------TC---ATATGT-AACATAT--------G------TCA--T--G-GCCT--A------------T--
i Myotis_lucifugus.GL429869.1                            I 3 I 16
s Myotis_myotis.MyoMyo_scaffold_281845                        1044 50 +      1835 GACACTTGTCTGTACCAT-TCC-TT-------TC---ATATGT-AACATAT--------G------TCA--T--G-GCCT--A------------T--
i Myotis_myotis.MyoMyo_scaffold_281845                   I 3 I 17
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190310 52 +    196477 GTCACCTGTCAGCACCAT-TGC-TT-------TG---GAACCT-AGAA--T------ACA------TGA--T--GGTC-T--A------------TCA
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 3 I 2
s Nannospalax_galili.KL204047.1                            2035599 28 -   3037898 ACAATTTGTCTACACTAA-ATT-TT-------TG---GAA----------------------------------------------------------
i Nannospalax_galili.KL204047.1                          I 4 C 0
s Nasalis_larvatus.k141_413338                               16291 55 +     21681 GGCATTAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TATC-GCCC--A-ATT--------TGA
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308599 52 +  31847680 ggtacatgtctgcaccat-tcc-tc-------tg---gAACAT-AGCA--T------ATG------T--TAT--G-GTCT--A------------TCA
i Neomonachus_schauinslandi.NINY01007730.1               I 6 I 8
s Neophocaena_asiaeorientalis.KZ687982.1                   5866777 58 +   7148211 ggcacttgtgtgccccat-tcc-tt-------tg---gaacat-aatg--t------atgccatgGTCA--T--G-GCCt--g------------tca
i Neophocaena_asiaeorientalis.KZ687982.1                 I 3 I 2
s Noctilio_leporinus.NocLep_scaffold_251                    758923 53 +    783361 GGCACTTGACTGTACTGTTTCC-TT-------TG---AAATGT-AATA--T------GCG------TCA--C--G-GCCT--A------------TCA
i Noctilio_leporinus.NocLep_scaffold_251                 I 3 I 2
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150465 52 -   9404916 ggcacatgtctgtaccat-tcc-tc-------ta---gaacat-agta--t------atg------t--cat--g-gtct--a------------tca
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 6 I 8
s Nycticebus_bengalensis.LG01                            102595852 53 - 196305487 GGCAT-TGTCTGCATCAT-GCT-TA-------TG---AAACTT-AACA--T------ATG------C-A--T--G-GCCT--A-AAT--------TGA
i Nycticebus_bengalensis.LG01                            C 0 I 3
s Nycticebus_coucang.k141_1514628                             1319 53 -      5837 GGCAT-TGTCTGCATCAT-GCT-TA-------TG---AAACTT-AACA--T------ATG------C-A--T--G-GCCT--A-AAT--------TGA
i Nycticebus_coucang.k141_1514628                        C 0 I 3
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771774 53 + 199412804 GGCAT-TGTCTGCATCAT-GCT-TA-------TG---AAACTT-AACA--T------ATG------C-A--T--G-GCCT--A-AAT--------TGA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 3
s Ochotona_princeps.JH802162.1                             1365259 30 +   3988456 AGCACCTGTCTGCATCAT-TCT-CT-------TG---GGACT--------------------------------------------------------
i Ochotona_princeps.JH802162.1                           I 4 I 26
s Odobenus_rosmarus.KB229312.1                              507744 52 -   2017862 ggttcatatctgtaccat-tcc-tc-------tg---gAACAT-AGCA--T------ATG------T--TAT--G-GTCT--A------------TCA
i Odobenus_rosmarus.KB229312.1                           I 6 I 8
s Okapia_johnstoni.LVCL01S0005463.1                          77593 52 -    150152 GGCACTTGTCTGCTCCAT-TTG-TT-------TG---GAATGT-AACG--T------GTG------TCA--T--G-GCCT--G------------cca
i Okapia_johnstoni.LVCL01S0005463.1                      I 3 I 2
s Ondatra_zibethicus.OndZib_scaffold_46174                   26179 49 +     28053 ACAACTTATTTGCATTGG-TTT-CT-------TG---GAATTT-AACA--C------T--------T--TAT--G-GCTT--A------------TC-
i Ondatra_zibethicus.OndZib_scaffold_46174               I 4 I 8
s Onychomys_torridus.OnyTor_scaffold_2986                    81216 49 +    102263 ACAACTTATTCCCATCAT-TTT-CT-------TG---GAACTT-AACA--C------ATG------T--TAC--A-GCCT--A---------------
i Onychomys_torridus.OnyTor_scaffold_2986                I 4 I 10
s Orcinus_orca.KB316932.1                                  2782700 52 -  10937097 GGCACTTCTGTGCCCCAT-TCC-TT-------TG---GAACAT-AATG--T------ATG------TCA--T--G-GCCt--g------------tca
i Orcinus_orca.KB316932.1                                I 3 I 2
s Orycteropus_afer.OryAfe_flattened_line_144387              12239 32 -     18566 GGCACTT-TCTGCACTAT-TCC-TT-------TG---G--------AA--T------ATG------T-------------------------------
i Orycteropus_afer.OryAfe_flattened_line_144387          I 6 I 14
s Oryctolagus_cuniculus.CM000791.1                        67148707 30 + 174332312 GGCTCCTGTCTGCACCAT-TCT-CT-------TG---GAACC--------------------------------------------------------
i Oryctolagus_cuniculus.CM000791.1                       I 4 I 34
s Otocyon_megalotis.JAEUCK010005147.1                       463414 52 -    559221 ggcacatgtctgtaccat-tcc-tc-------ta---gaacat-agta--t------atg------t--cat--g-gtct--a------------tca
i Otocyon_megalotis.JAEUCK010005147.1                    I 6 I 8
s Otolemur_crassicaudatus.k141_222918                         7107 53 +      8798 GGCAT-TGTCTGCATCAT-GTT-TA-------TG---GAACTT-AATA--T------ATG------C-A--T--G-GCCT--A-AAT--------TGA
i Otolemur_crassicaudatus.k141_222918                    C 0 I 3
s Otolemur_garnettii.GL873799.1                             699346 53 -   1103335 gGCAT-TGTCTGCATCAT-GCT-TA-------TG---GAACTT-AATA--T------ATG------C-A--T--G-GCCT--A-AAT--------tga
i Otolemur_garnettii.GL873799.1                          C 0 I 3
s Ovis_aries.CM001607.2                                   17586859 52 +  44047080 ggcacttgtctgcttcat-tca-tt-------tg---gaacgc-aaca--t------gtg------c--cgt--g-ttct--t------------cca
i Ovis_aries.CM001607.2                                  I 3 I 2
s Ovis_canadensis.OviCan_scaffold_2572                      174836 52 -    191736 ggcacttgtctgcttcat-tca-tt-------tg---gaatgc-aaca--t------gtg------c--cgt--g-ttct--t------------cca
i Ovis_canadensis.OviCan_scaffold_2572                   I 3 I 2
s Pan_paniscus.KQ411613.1                                    45242 56 +     80009 GGCATTTGTCTGCACCAT-TCT-TT-------TA---GAAATT-AACA--T------CTG------T----AATG-GCCC--acatt--------tga
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189144142 56 + 189151597 GGCATTTGTCTGCACCAT-TCT-TT-------TA---GAAATT-AACA--T------CTG------T----AATG-GCCC--acatt--------tga
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152218 52 +    230217 GGCACGCATCAGCACTAT-TCC-TG-------TG---GGTCAT-AACA--T------ATG------TCA--T--G-ATCT--A------------TCG
i Panthera_onca.PanOnc_flattened_line_3271               I 6 I 2
s Panthera_pardus.KV860321.1                                265427 52 +  18783137 GGCACGCATCAGCACTAT-TCC-TG-------TG---GGTCAT-AACA--T------ATG------TCA--T--G-ATCT--A------------TCG
i Panthera_pardus.KV860321.1                             I 6 I 2
s Panthera_tigris.KE722367.1                               4722307 52 -   8748460 GGCACGCATCAGCACTAT-TCC-TG-------TG---GGTCAT-AACA--T------ATG------TCA--T--G-ATCT--A------------TCG
i Panthera_tigris.KE722367.1                             I 6 I 2
s Pantholops_hodgsonii.KE114653.1                          1265754 52 -   2937107 ggcacttgtctgcttcat-tca-tt-------tg---gaatgc-aaca--t------gtg------c--cat--g-gcct--t------------ccg
i Pantholops_hodgsonii.KE114653.1                        I 3 I 2
s Papio_anubis.CM001495.2                                183444384 55 + 183742232 GGCATTAATCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TGTG-GCCC--a-act--------tga
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             8030 55 +     20448 GGCATTAATCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TGTG-GCCC--A-ACT--------TGA
i Papio_cynocephalus.k141_4307930                        C 0 I 4
s Papio_hamadryas.Contig39                                20564842 55 +  20919399 GGCATTAATCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TGTG-GCCC--A-ACT--------TGA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6774 55 +     41871 GGCATTAATCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TGTG-GCCC--A-ACT--------TGA
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    10067 55 +     27711 GGCATTAATCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TGTG-GCCC--A-ACT--------TGA
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  1064 55 -     11374 GGCATTAATCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TGTG-GCCC--A-ACT--------TGA
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13713 52 -     78924 CACACATGTCAGCAGCAT-CCC-TG-------TG---AATCAT-AATG--T------ATG------TCA--C--G-ATCT--A------------TCG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 6 I 2
s Perodicticus_ibeanus.k141_1182643                            124 53 -      3244 GGCAT-TGTCTGCATCAT-ACT-TA-------TG---GAACTT-AACA--T------ATT------C-A--T--G-GCCC--A-AAT--------TGA
i Perodicticus_ibeanus.k141_1182643                      C 0 I 3
s Perodicticus_potto.k141_1186926                              502 53 +     10374 GGCAT-TGTCTGCATCAT-ACT-TA-------TG---GAACTT-AACA--T------ATT------C-A--T--G-GCCC--A-AAT--------TGA
i Perodicticus_potto.k141_1186926                        C 0 I 3
s Peromyscus_maniculatus.KI615324.1                       18195795 49 -  18517816 ACAACTTATTTGCAACAT-TTT-CT-------TG---GAACTT-AACA--C------ATG------T--TAT--G-GCCT--A---------------
i Peromyscus_maniculatus.KI615324.1                      I 4 I 7
s Petromus_typicus.PetTyp_scaffold_42190                     29147 45 -     29689 -------GTCTGCATCAC-TCT-TT-------TG---AAACTT-CACA--C------ATG------TCA--C--G-GCCC--A------------AAA
i Petromus_typicus.PetTyp_scaffold_42190                 I 4 I 6
s Phocoena_phocoena.PhoPho_flattened_line_24159               9739 52 +     63832 ggcacttgtgtgccccat-tcc-tt-------tg---gaacat-aatg--t------atg------t--cat--g-gcct--g------------tCa
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 3 I 2
s Piliocolobus_badius.k141_1234363                           44783 55 +     62158 GGCATCAGTCTGCACCGT-TCT-TT-------TA---GAATTT-AACA--T------TTG------T----TGTG-GCCC--A-ATT--------TGA
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        39530 55 +     89929 GGCATCAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------TTG------T----TGTG-GCCC--A-ATT--------tga
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            40946 55 +     51399 GGCATCAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------TTG------T----TGTG-GCCC--A-ATT--------TGA
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14297187 55 -  14605196 GGCATCAGTCTGCACCGT-TCT-TT-------TA---GAATTT-AACA--T------TTG------T----TGTG-GCCc--a-att--------tga
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2833 50 +     22620 GACACTTGTCTGTATCAT-TCC-TT-------TC---ATATGT-AACATAT--------G------TCA--T--G-GCTT--A------------T--
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 3 I 16
s Platanista_gangetica.PlaMin_flattened_line_32310           35440 52 +     35617 GGCACTTGTGTGCCCCAT-TCC-TT-------TG---GAACAT-AATG--T------ATG------TCA--T--G-GCCT--G------------TCA
i Platanista_gangetica.PlaMin_flattened_line_32310       I 3 I 2
s Pongo_abelii.CM009266.2                                189132287 56 + 189387572 AGCATTTGTCTGCAACAT-TCT-TT-------TA---GAAATT-AACA--T------CTG------T----AATG-GCCC--acatt--------tga
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9571894 56 +   9816681 AGCATTTGTCTGCAACAT-TCT-TT-------TA---GAAATT-AACA--T------CTG------T----AATG-GCCC--ACATT--------TGA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               74466 55 -     81375 GGCATTAGTCTGCACCAT-TCT-TT-------TA---GAATGT-AACA--T------CTG------T----TATG-GCCC--a-att--------tga
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              6287 55 +     19060 GGCATTAGTCTGCACCAT-TCT-TT-------TA---GAATGT-AACA--T------CTG------T----TATG-GCCC--A-ATT--------TGA
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 15776 14 -     22811 ---------------------------------A---GGACCT-AACA--T------A--------T-------------------------------
i Procavia_capensis.ProCapCap_scaffold_85530             I 24 I 14
s Psammomys_obesus.NESX01036370.1                            11419 50 -     21651 ACAACTTACTCGCATCAT-CTT-CT-------TG---GAATTT-AA----C------ATG------T--TAT--G-GCCC--A------------TCA
i Psammomys_obesus.NESX01036370.1                        I 4 I 7
s Pteronotus_parnellii.KE909381.1                            16216 53 -     21811 GGCACCTGTCTGTTctatttcc-tt-------tg---aaatgt-aaCA--T------ATG------TCA--T--G-GGCT--A------------TCA
i Pteronotus_parnellii.KE909381.1                        I 3 I 2
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41602 52 +     42204 GGAACATGTCTGCACCAC-TCC-TC-------TG---GAACAT-AATA--T------ATG------TCA--T--G-GTCT--A------------TCA
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 6 I 8
s Pteropus_alecto.KB030862.1                              22977849 52 +  28871421 ggcactcgtctgcgctat-tcc-tt-------tg---gaatgt-aaca--t------atg------t--cac--c-acct--g------------tca
i Pteropus_alecto.KB030862.1                             I 3 I 2
s Pteropus_vampyrus.KN534172.1                                7902 52 -      8028 ggcacttgtctgcactat-tcc-tt-------tg---gaatgt-aaca--t------atg------t--cac--c-acct--g------------tca
i Pteropus_vampyrus.KN534172.1                           I 3 I 2
s Puma_concolor.QAVW01001104.1                            20275379 52 -  38429054 GGCACACATCAGCACTAT-TCC-TG-------TG---GATCAT-AACA--T------ATG------TCA--T--G-ATCT--A------------TCG
i Puma_concolor.QAVW01001104.1                           I 6 I 2
s Pygathrix_cinerea.k141_1153803                             16273 55 -     91421 GGCATTAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TATG-GCCC--A-ATT--------TGA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7610393 55 +   7812017 GGCATTAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TATG-GCCC--A-ATT--------TGA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             16272 55 -     72585 GGCATTAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TATG-GCCC--A-ATT--------TGA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6335 52 +     55207 GGCACTTGTCTGCTCCGT-TCG-TC-------TG---GAATGC-AACA--T------GTG------TCA--T--G-GCCT--G------------CCA
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 3 I 2
s Rattus_norvegicus.chr16                                 53571623 52 +  90668790 GCAACTTACTTGTGTCAT-TTT-CT-------TG---GAGCTT-AACA--C------ATG------T-A-AT--G-GCCT--G------------Tca
i Rattus_norvegicus.chr16                                I 2 I 7
s Rhinolophus_sinicus.LVEH01000134.1                        368065 52 -   3329780 ggcatttgtctgcaccat-acc-tt-------tg---gaacat-aaca--t------gtG------TCA--T--G-GCCT--A------------Tca
i Rhinolophus_sinicus.LVEH01000134.1                     I 3 I 2
s Rhinopithecus_bieti.k119_217274                             7983 55 -     11128 GGCATTAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TATG-GCCC--A-ATT--------tga
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91237332 55 - 195417433 GGCATTAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TATG-GCCc--a-att--------tga
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7672988 55 +   7961872 GGCATTAGTCTGCACCAT-TCT-TT-------TA---GAATTT-Aaca--t------ctg------t----tatg-gccc--a-att--------tga
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88891 52 -     96226 ggcacttgtctgcactat-tcc-tt-------tg---gAATGT-AACA--G------AGG------TCA--C--G-ACCT--G------------TCA
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 3 I 2
s Saguinus_bicolor.k141_8081                                  2375 34 +     42994 AGCATTAGTCAGCACCAT-CCT-TT-------TA---GGATTG-AAC---------------------------------------------------
i Saguinus_bicolor.k141_8081                             C 0 I 19
s Saguinus_imperator.k141_1496743                             1074 34 +      2253 AGCATTAGTCAGCACCAT-TCT-TT-------TA---GGATTG-AAG---------------------------------------------------
i Saguinus_imperator.k141_1496743                        C 0 I 19
s Saguinus_inustus.k141_3945547                               1503 34 -      8737 AGCATTAGTCAGCACCAT-TCT-TT-------TA---GGATTG-AAG---------------------------------------------------
i Saguinus_inustus.k141_3945547                          C 0 I 19
s Saguinus_labiatus.k141_4004060                              1156 34 +      2343 AGCATTAGTCAGCACCAT-TCT-TT-------TA---GGATTG-AAG---------------------------------------------------
i Saguinus_labiatus.k141_4004060                         C 0 I 19
s Saguinus_midas.LG03                                    209476033 34 + 209938924 AGCATTAGTCAGCACCAT-CCT-TT-------TA---GGATTG-AAC---------------------------------------------------
i Saguinus_midas.LG03                                    C 0 I 19
s Saguinus_mystax.k141_4699220                                 479 34 -      7576 AGCATTAGTCAGCACCAT-TCT-TT-------TA---GGACTG-AAG---------------------------------------------------
i Saguinus_mystax.k141_4699220                           C 0 I 19
s Saimiri_boliviensis.NW_024100920.1                     119952111 55 - 121099817 GGCATGAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--G------ATG------T--TAT--G-GCCA--c-att--------tga
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24453 55 +     46362 GGCATGAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--G------ATG------T--TAT--G-GCCA--C-ATT--------TGA
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               24548 55 +     45824 GGCATGAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--G------ATG------T--TAT--G-GCCA--C-ATT--------TGA
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             41227 55 -     64574 GGCATGAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--G------ATG------T--TAT--G-GCCA--C-ATT--------TGA
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4300 55 -     23631 GGCATGAGTCTGCACCAT-TCT-TT-------CA---GAATTT-AACA--G------ATG------T--TAT--G-GCCA--C-ATT--------TGA
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 24444 55 -     61129 GGCATGAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--G------ATG------T--TAT--G-GCCA--C-ATT--------TGA
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5421790 35 -   5703754 GGCGTTAGTCTGCACCAT-TCT-TT-------TA---GGATTT-AACA--------------------------------------------------
i Sapajus_apella.ctg103                                  C 0 I 18
s Sapajus_macrocephalus.k141_351809                          57031 35 -     80660 GGCGTTAGTCTGCACCAT-TCT-TT-------TA---GGATTT-AACA--------------------------------------------------
i Sapajus_macrocephalus.k141_351809                      C 0 I 18
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154269 51 -    313613 GGCGCT-GTCTGCGCCAT-CCC-TG-------TG---GAACTT-AACA--T------ACA------TCA--T--G-GTCT--A------------CCC
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 3 I 4
s Semnopithecus_entellus.k141_1672505                         1164 55 -     12572 GGCATTAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TATG-GCCC--A-att--------tga
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      28014 55 +     39453 GGCATTAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TATG-GCCC--A-att--------tga
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            8532 55 +     27826 AGCATTAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TATG-GCCC--A-ATT--------TGA
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             8054 55 -     19483 GGCATTAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TATG-GCCc--a-att--------tga
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      1355 55 -     12762 GGCATTAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACa--t------ctg------t----tatg-gccc--a-att--------tga
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           1216 55 +     13763 GGCATTAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TATG-GCCC--A-ATT--------TGA
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     1318 50 -     30804 ACAACTTATTTGCATTAT-TTT-TC-------TG---GAATTT-AACA--T------G--------T--TAT--G-ACCT--A------------TCA
i Sigmodon_hispidus.SigHis_scaffold_42075                I 4 I 7
s Solenodon_paradoxus.SolPar_flattened_line_126               4823 36 +   1910179 GGCACTTGCCTGTAGCAT-TCC-TT-------TG---GAAAAT-AACA--T-----------------------------------------------
i Solenodon_paradoxus.SolPar_flattened_line_126          I 3 I 10
s Sorex_araneus.JH798187.1                                13652060 37 -  18376816 GGCATCTGTCCACACCTT-CCT-TT-------TG---AGAAGT-AACA--T------G----------------------------------------
i Sorex_araneus.JH798187.1                               I 3 I 17
s Spermophilus_dauricus.KZ294078.1                         1955160 52 -   3870691 GTACCTTGTCTGCACAAA-TCT-GC-------TG---GAATTT-AGCA--T------ATA------T--TAT--G-ACCC--A------------GCA
i Spermophilus_dauricus.KZ294078.1                       I 4 I 5
s Spilogale_gracilis.SpiGra_flattened_line_13525             32076 52 +     97271 GGTATATGACTGCACCAT-TCC-TC-------TG---GAACAT-AATA--T------ATG------TCA--T--G-GTCT--A------------TCA
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 6 I 8
s Suricata_suricatta.SurSur_flattened_line_6629              19396 54 -    196729 GGCACACGTCAGCACCAT-TCC-CG-------TG---GATCGT-AACA--T------ATG------TCA--T--G-ATCTATA------------TCA
i Suricata_suricatta.SurSur_flattened_line_6629          I 6 I 2
s Sus_scrofa.JH118708.1                                      37469 52 -     47482 GGCACATGTCTGCCCCAT-TC-CTT-------TG---GAAGGT-ATCA--T------AGG------TCA--T--G-Gtct--g------------ttg
i Sus_scrofa.JH118708.1                                  I 3 I 898
s Tadarida_brasiliensis.TadBra_scaffold_25820                11886 48 +     41958 GGCACTTGTCTGTACCGG-TCC-TT-------CG---AAATGT-AACA--T--------G------TCA--T--G-GCCT--A------------T--
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 3 I 2
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73675 52 +    116680 GTCACTTGTCAGCACCAT-TGC-TT-------TG---GAACCC-AGAA--T------ACG------TGA--T--GGCC-G--A------------TCA
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 3 I 2
s Theropithecus_gelada.CM009954.1                        186429702 55 + 186847797 GGCATTAATCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TGTG-GCCC--a-att--------tga
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106439 45 +    114563 -------TTCTGCACCAC-TCT-TT-------TG---AAACTT-CACA--T------ATG------CCA--T--G-GCCC--A------------ACA
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 4 I 6
s Tolypeutes_matacus.TolMat_scaffold_228639                   7414 51 +      8208 ATCGCTTGTCTGCACCAT-TCC-TT-------TG---GAACCT-GGAA--T------ACG------G-A-AT--G-TT-C--A------------CGA
i Tolypeutes_matacus.TolMat_scaffold_228639              I 3 I 2
s Tonatia_saurophila.TonSau_scaffold_294                     82275 53 +    610378 ggcacttgtctgtactattata-tt-------tA---AAATGT-AACA--T------ATG------CCA--T--G-GCCT--A------------TCA
i Tonatia_saurophila.TonSau_scaffold_294                 I 3 I 2
s Trachypithecus_auratus.k141_722599                         12105 55 -     20410 GGCATTAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TATG-GCCC--a-att--------tga
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      1219 55 -     12674 GGCATTAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TAtg-gccc--a-att--------tga
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       12206 55 +     19930 GGCATTAGTCTGCACCAT-TCT-TT-------TA---GAATTT-Aaca--t------ctg------t----tatg-gccc--a-att--------tga
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       8617 55 -     19997 GGCATTAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TATG-GCCC--A-ATT--------TGA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48756 55 -     60166 GGCATTAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------ATG------T----TATG-GCCC--a-att--------tga
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        16228 55 -     27529 GGCATTAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TATG-GCCC--A-ATT--------TGA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     16172 55 -     18194 GGCATTAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TATG-GCCC--A-ATT--------TGA
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9884 55 -     21137 GGCATTAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TATG-GCCC--A-ATT--------TGA
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    8587 55 -     10723 GGCATTAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TATG-GCCC--A-ATT--------TGA
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7759 55 +      9834 GGCATTAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TATG-GCCC--A-ATT--------tga
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        26072 55 +     32220 GGCATTAGTCTGCACCAT-TCT-TT-------Ta---gaattt-aaca--t------ctg------t----tatg-gccc--a-att--------tgt
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5940174 55 +   6242583 GGCATTAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TATG-Gccc--a-att--------tga
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        9425 55 +     20839 GGCATTAGTCTGCACCAT-TCT-TT-------TA---GAATTT-AACA--T------CTG------T----TATG-Gccc--a-att--------tga
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                     692 51 +     27266 GGCACTTGTCTGCTCCAT-TCC-TT-------TG---AAATGT-GATA--T------ATG------CCA--T--G-A-CT--G------------TCG
i Tragulus_javanicus.TraJav_scaffold_40725               I 3 I 2
s Trichechus_manatus.JH594705.1                            4294923 18 +  10818551 GGCACTT-TCTGCACCAT-T------------------------------------------------------------------------------
i Trichechus_manatus.JH594705.1                          I 6 I 30
s Tupaia_chinensis.KB320699.1                              2156848 52 +   4065304 AGCATCTGTCTGCACCCT-TCT-TT-------CT---GAACTT-AACA--T------ATG------TGA--T--G-GCCT--A------------TCC
i Tupaia_chinensis.KB320699.1                            I 4 I 3
s Tupaia_tana.TupTan_flattened_line_97126                    10295 52 -     10553 AGCATCTGTCTGCACCCT-TCT-TC-------CT---GAACTT-AACA--T------ATG------TGA--T--G-GCCT--A------------TCC
i Tupaia_tana.TupTan_flattened_line_97126                I 3 I 3
s Tursiops_truncatus.MRVK01000835.1                       15738945 52 +  33153633 GGCACTTGTGTGCCCCAT-TCC-TT-------TG---GAACAT-AATG--T------ATG------TCA--T--G-GCCt--g------------tca
i Tursiops_truncatus.MRVK01000835.1                      I 3 I 2
s Uropsilus_gracilis.UroGra_scaffold_12083                   54367 51 -     77625 ggcact-atctgcaccat-tcc-tt-------tg---gaactt-aaCA--T------AAG------T--TAT--G-GTAT--T------------TCA
i Uropsilus_gracilis.UroGra_scaffold_12083               I 3 I 2
s Ursus_maritimus.KK499267.1                               4851505 39 -   5085361 GGTACGTGTTTGCACCAT-TCC-TC-------TG---GAACAT-AACA--T------ATG--------------------------------------
i Ursus_maritimus.KK499267.1                             I 6 C 0
s Vicugna_pacos.KN270157.1                                 5372837 51 -   5488506 GGCACTTGTCTGCCTCAT-TCC-TT-------CG---GAGCGT-AACA--T------ATG------TCA--T--g-gctt--a------------tt-
i Vicugna_pacos.KN270157.1                               I 3 I 24
s Vulpes_lagopus.VulLag_flattened_line_30954                 11862 52 -     43706 ggcacatgtctgtaccat-tct-tc-------ta---gaacat-agta--t------atg------t--cat--g-gtct--a------------tca
i Vulpes_lagopus.VulLag_flattened_line_30954             I 6 I 8
s Xerus_inauris.XerIna_scaffold_2302                          2131 52 +    224448 GTATCTTGTCTGCACAAA-TCT-GC-------TG---GAATTT-AGCA--T------ATA------T--TAT--G-ACCC--A------------TCA
i Xerus_inauris.XerIna_scaffold_2302                     I 4 I 6
s Zapus_hudsonius.ZapHud_scaffold_11398                      15918 51 +     63895 ATCACTTGTCTACACCAT-TTT-GG------GGG---GAACTT-AGCA--T------ATG------T--TAT--A-GCCT--T------------G--
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 4 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_3601914            292  3 +       295 GGC-----------------------------------------------------------------------------------------------
i Ziphius_cavirostris.ZipCav_flattened_line_3601914      I 3 N 0
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Tarsius_wallacei.k141_254427                                1877  3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080  3 +     70052 I
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             35221  4 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1851541  4 +   8254450 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Glis_glis.GliGli_scaffold_19807                            32063  0 +     49224 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Cephalopachus_bancanus.k141_1423433                         6085  3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Carlito_syrichta.NW_007259797.1                           156587  3 -    496798 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       7955 1 +     62944 g
s Acomys_cahirinus.AcoCah_scaffold_12655                     71867 1 +     87051 G
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 7 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     75571 1 -     89534 A
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   15882 1 -     52922 g
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15802 1 -     28001 G
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          6300 1 -     18505 G
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           7152 1 -     12518 G
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              8717 1 +     51355 G
i Alouatta_belzebul.k141_3560514                         I 16 C 0
s Alouatta_caraya.k141_1701091                                1826 1 -     36483 G
i Alouatta_caraya.k141_1701091                           I 16 C 0
s Alouatta_discolor.k141_566626                              12278 1 +     28687 G
i Alouatta_discolor.k141_566626                          I 16 C 0
s Alouatta_juara.k141_1302312                                  791 1 +     27940 G
i Alouatta_juara.k141_1302312                            I 16 C 0
s Alouatta_macconnelli.k141_918386                            1835 1 -      9457 G
i Alouatta_macconnelli.k141_918386                       I 16 C 0
s Alouatta_nigerrima.k141_1929159                              791 1 +     30492 G
i Alouatta_nigerrima.k141_1929159                        I 16 C 0
s Alouatta_palliata.k141_2135620                              4786 1 +     47717 G
i Alouatta_palliata.k141_2135620                         I 16 C 0
s Alouatta_puruensis.k141_362188                              1518 1 +      5663 G
i Alouatta_puruensis.k141_362188                         I 16 C 0
s Alouatta_seniculus.k141_117119                             15970 1 +     50774 G
i Alouatta_seniculus.k141_117119                         I 16 C 0
s Aotus_azarae.k141_3104676                                  16963 1 -     33861 G
i Aotus_azarae.k141_3104676                              I 20 C 0
s Aotus_griseimembra.k141_2240599                            16960 1 -     34016 G
i Aotus_griseimembra.k141_2240599                        I 20 C 0
s Aotus_nancymaae.KZ198451.1                               4299387 1 -   5030052 g
i Aotus_nancymaae.KZ198451.1                             I 20 C 0
s Aotus_trivirgatus.k141_2152450                             16996 1 -     34685 G
i Aotus_trivirgatus.k141_2152450                         I 20 C 0
s Aotus_vociferans.k141_344750                               30121 1 -     47192 G
i Aotus_vociferans.k141_344750                           I 20 C 0
s Arctocebus_calabarensis.k141_1648548                         499 1 +      5281 G
i Arctocebus_calabarensis.k141_1648548                   I 3 C 0
s Callibella_humilis.k141_10318                                746 1 +     27907 G
i Callibella_humilis.k141_10318                          I 23 C 0
s Callimico_goeldii.k141_737284                                384 1 -     31217 G
i Callimico_goeldii.k141_737284                          I 23 I 2
s Callithrix_geoffroyi.k119_69176                              682 1 +      5377 G
i Callithrix_geoffroyi.k119_69176                        I 23 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592543 1 - 189096842 G
i Callithrix_jacchus.pat_scaffold_3                      I 23 C 0
s Callithrix_kuhlii.k119_1168854                              1357 1 -     12329 G
i Callithrix_kuhlii.k119_1168854                         I 23 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138413 1 +    179628 G
i Castor_canadensis.CasCan_scaffold_2074                 I 7 C 0
s Cebuella_niveiventris.k141_280505                          14456 1 +     15466 G
i Cebuella_niveiventris.k141_280505                      N 0 C 0
s Cebuella_pygmaea.k141_793006                                 383 1 -     15088 G
i Cebuella_pygmaea.k141_793006                           N 0 C 0
s Cebus_albifrons.Contig27                                25653889 1 +  26074798 G
i Cebus_albifrons.Contig27                               I 18 C 0
s Cebus_olivaceus.k141_1764483                                1827 1 +     28840 G
i Cebus_olivaceus.k141_1764483                           I 18 C 0
s Cebus_unicolor.k141_1837183                                 1556 1 +     14051 G
i Cebus_unicolor.k141_1837183                            I 18 C 0
s Cercocebus_atys.KQ010504.1                               4476819 1 +   4669795 g
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        1321 1 +     17872 A
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           1910 1 -     14043 G
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          10011 1 +     27781 G
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        10179 1 -     20310 G
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          13159 1 +     29689 G
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7905 1 -     20078 G
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          15827 1 -     27936 G
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            4693 1 -     17152 G
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38818238 1 +  39242232 G
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223927 1 -  21565898 G
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       41046 1 -     53127 G
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        1297 1 +     13442 G
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15846 1 -     27947 G
i Cercopithecus_petaurista.k141_807961                   C 0 I 4
s Cercopithecus_pogonias.k141_822820                         15822 1 +     17596 G
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          1865 1 +     14005 G
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254001 1 +   2543920 G
i Chinchilla_lanigera.JH722012.1                         I 6 C 0
s Chiropotes_albinasus.k141_2206961                           2163 1 -     15524 G
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18429804 1 -  18827391 G
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       16240 1 -     50209 G
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135423241 1 + 135778131 g
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1911719 1 +   2368649 g
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949971 1 + 200372422 G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              38253 1 +     84244 G
i Colobus_polykomos.k141_906115                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 51145 1 +     63868 A
i Cricetomys_gambianus.CriGam_scaffold_18520             I 7 C 0
s Cricetulus_griseus.LT883664.1                           11668590 1 + 224834208 g
i Cricetulus_griseus.LT883664.1                          I 7 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    838190 1 +   1526836 G
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 6 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37474 1 +     67921 G
i Dinomys_branickii.DinBra_scaffold_21862                I 6 C 0
s Ellobius_lutescens.LOEQ01008920.1                          21602 1 -    110024 a
i Ellobius_lutescens.LOEQ01008920.1                      I 8 C 0
s Ellobius_talpinus.LOJH01081419.1                            1508 1 +      8657 t
i Ellobius_talpinus.LOJH01081419.1                       I 8 C 0
s Erythrocebus_patas.Contig38                             21206410 1 -  21539334 G
i Erythrocebus_patas.Contig38                            C 0 C 0
s Fukomys_damarensis.KN121974.1                             851514 1 +   3816255 G
i Fukomys_damarensis.KN121974.1                          I 6 C 0
s Galago_moholi.ctg2040                                     429671 1 -    453645 G
i Galago_moholi.ctg2040                                  I 3 C 0
s Galago_senegalensis.k141_631886                             7361 1 +     11339 G
i Galago_senegalensis.k141_631886                        I 3 C 0
s Galagoides_demidoff.k141_1711393                            4650 1 +     41679 G
i Galagoides_demidoff.k141_1711393                       I 3 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               2310 1 -      9135 G
i Galeopterus_variegatus.GalVar_scaffold_108840          I 3 C 0
s Gorilla_gorilla.LT578341.1                             186339347 1 + 186649187 g
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33726 1 +     78134 G
i Graphiurus_murinus.GraMur_scaffold_10447               I 6 C 0
s Heterocephalus_glaber.JH602082.1                        20663285 1 +  22651954 G
i Heterocephalus_glaber.JH602082.1                       I 6 C 0
s Hoolock_leuconedys.ctg274                                    436013 1 +    630532 g
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84168 1 +    135385 G
i Hystrix_cristata.HysCri_scaffold_5660                  I 6 C 0
s Jaculus_jaculus.JH725527.1                               8278233 1 -   9596543 A
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        9118 1 +     64341 G
i Leontocebus_fuscicollis.k141_1820339                   I 19 C 0
s Leontocebus_illigeri.k141_1304848                           1458 1 -     35062 G
i Leontocebus_illigeri.k141_1304848                      I 19 C 0
s Leontocebus_nigricollis.k141_4610752                        9145 1 +     35603 G
i Leontocebus_nigricollis.k141_4610752                   I 19 C 0
s Leontopithecus_chrysomelas.k141_1519602                    30762 1 +     38576 G
i Leontopithecus_chrysomelas.k141_1519602                I 23 C 0
s Leontopithecus_rosalia.k141_464620                         27466 1 +     66356 G
i Leontopithecus_rosalia.k141_464620                     I 23 C 0
s Lepus_americanus.LepAme_scaffold_107385                     7870 1 -     14121 G
i Lepus_americanus.LepAme_scaffold_107385                I 34 C 0
s Lophocebus_aterrimus.ctg367                              1438362 1 +   1826925 G
i Lophocebus_aterrimus.ctg367                            C 0 I 4
s Loris_lydekkerianus.k141_399337                            17695 1 -     33856 G
i Loris_lydekkerianus.k141_399337                        I 3 C 0
s Loris_tardigradus.ctg83                                  1015406 1 +   6120653 G
i Loris_tardigradus.ctg83                                I 3 C 0
s Macaca_arctoides.k141_2326796                               8177 1 +     40492 G
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59677436 1 +  60120075 g
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13952 1 -     26193 g
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            81732 1 -    114318 G
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  7423 1 -     23192 G
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16885 1 -     29190 g
i Macaca_leonina.k141_3550399                            C 0 I 10
s Macaca_maura.k141_2733130                                  25461 1 +     37952 g
i Macaca_maura.k141_2733130                              C 0 I 4
s Macaca_mulatta.NC_041758.1                             186840550 1 + 187317192 g
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25459102 1 -  25927173 g
i Macaca_nemestrina.KQ007038.1                           C 0 I 16
s Macaca_nigra.k141_1655396                                  81309 1 +     89720 g
i Macaca_nigra.k141_1655396                              C 0 I 10
s Macaca_radiata.k141_3680011                                 8310 1 +     20474 G
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   8099 1 -     14993 g
i Macaca_siberu.k141_635500                              C 0 I 10
s Macaca_silenus.Contig273                                  330965 1 -    668171 g
i Macaca_silenus.Contig273                               C 0 I 10
s Macaca_thibetana.k99_256239                                 6423 1 -     24072 G
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               27048 1 -     45290 g
i Macaca_tonkeana.k141_1498238                           C 0 I 4
s Mandrillus_leucophaeus.scaffold280                      23938639 1 -  24302211 G
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352761 1 +    752769 G
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 33830 1 +    140813 G
i Meriones_unguiculatus.MerUng_scaffold_7390             I 7 C 0
s Mesocricetus_auratus.KB708134.1                         12183286 1 -  29670104 G
i Mesocricetus_auratus.KB708134.1                        I 8 C 0
s Mico_argentatus.k141_1024458                                 383 1 -     20047 G
i Mico_argentatus.k141_1024458                           N 0 C 0
s Mico_humeralifer.k141_1346949                                796 1 +      1399 G
i Mico_humeralifer.k141_1346949                          I 4 C 0
s Mico_schneideri.k141_916733                                        383 1 +      5107 G
i Mico_schneideri.k141_916733                                  N 0 C 0
s Microtus_ochrogaster.CM001695.1                         11261585 1 -  27267610 C
i Microtus_ochrogaster.CM001695.1                        I 7 C 0
s Miopithecus_ogouensis.k141_534055                          10325 1 -     28506 G
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mus_caroli.LT608237.1                                   84362448 1 - 120012414 G
i Mus_caroli.LT608237.1                                  I 7 C 0
s Mus_musculus.chr8                                       87651433 1 - 129401213 G
i Mus_musculus.chr8                                      I 7 C 0
s Mus_pahari.LT608297.1                                   31356091 1 -  89631738 g
i Mus_pahari.LT608297.1                                  I 7 C 0
s Nasalis_larvatus.k141_413338                               16346 1 +     21681 G
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nycticebus_bengalensis.LG01                            102595908 1 - 196305487 G
i Nycticebus_bengalensis.LG01                            I 3 C 0
s Nycticebus_coucang.k141_1514628                             1375 1 -      5837 G
i Nycticebus_coucang.k141_1514628                        I 3 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771830 1 + 199412804 G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 3 C 0
s Ochotona_princeps.JH802162.1                             1365315 1 +   3988456 G
i Ochotona_princeps.JH802162.1                           I 26 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   26236 1 +     28053 G
i Ondatra_zibethicus.OndZib_scaffold_46174               I 8 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    81275 1 +    102263 G
i Onychomys_torridus.OnyTor_scaffold_2986                I 10 C 0
s Oryctolagus_cuniculus.CM000791.1                        67148771 1 + 174332312 g
i Oryctolagus_cuniculus.CM000791.1                       I 34 C 0
s Otolemur_crassicaudatus.k141_222918                         7163 1 +      8798 G
i Otolemur_crassicaudatus.k141_222918                    I 3 C 0
s Otolemur_garnettii.GL873799.1                             699402 1 -   1103335 g
i Otolemur_garnettii.GL873799.1                          I 3 C 0
s Pan_paniscus.KQ411613.1                                    45298 1 +     80009 g
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Papio_anubis.CM001495.2                                183444439 1 + 183742232 g
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             8089 1 +     20448 G
i Papio_cynocephalus.k141_4307930                        I 4 C 0
s Papio_hamadryas.Contig39                                20564897 1 +  20919399 G
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6829 1 +     41871 G
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    10122 1 +     27711 G
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  1119 1 -     11374 G
i Papio_ursinus.k141_5274964                             C 0 C 0
s Perodicticus_ibeanus.k141_1182643                            180 1 -      3244 G
i Perodicticus_ibeanus.k141_1182643                      I 3 C 0
s Perodicticus_potto.k141_1186926                              558 1 +     10374 G
i Perodicticus_potto.k141_1186926                        I 3 C 0
s Peromyscus_maniculatus.KI615324.1                       18195851 1 -  18517816 G
i Peromyscus_maniculatus.KI615324.1                      I 7 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     29198 1 -     29689 G
i Petromus_typicus.PetTyp_scaffold_42190                 I 6 C 0
s Piliocolobus_badius.k141_1234363                           44838 1 +     62158 G
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        39585 1 +     89929 g
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            41001 1 +     51399 G
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14297242 1 -  14605196 g
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189132343 1 + 189387572 g
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9571950 1 +   9816681 G
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               74521 1 -     81375 g
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              6342 1 +     19060 G
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            11476 1 -     21651 G
i Psammomys_obesus.NESX01036370.1                        I 7 C 0
s Pygathrix_cinerea.k141_1153803                             16328 1 -     91421 G
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7610448 1 +   7812017 G
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             16327 1 -     72585 G
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53571682 1 +  90668790 g
i Rattus_norvegicus.chr16                                I 7 C 0
s Rhinopithecus_bieti.k119_217274                             8038 1 -     11128 g
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91237387 1 - 195417433 g
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7673043 1 +   7961872 g
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_8081                                  2428 1 +     42994 G
i Saguinus_bicolor.k141_8081                             I 19 C 0
s Saguinus_imperator.k141_1496743                             1127 1 +      2253 G
i Saguinus_imperator.k141_1496743                        I 19 C 0
s Saguinus_inustus.k141_3945547                               1556 1 -      8737 G
i Saguinus_inustus.k141_3945547                          I 19 C 0
s Saguinus_labiatus.k141_4004060                              1209 1 +      2343 G
i Saguinus_labiatus.k141_4004060                         I 19 C 0
s Saguinus_midas.LG03                                    209476086 1 + 209938924 G
i Saguinus_midas.LG03                                    I 19 C 0
s Saguinus_mystax.k141_4699220                                 532 1 -      7576 G
i Saguinus_mystax.k141_4699220                           I 19 C 0
s Saimiri_boliviensis.NW_024100920.1                     119952166 1 - 121099817 g
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24508 1 +     46362 G
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               24603 1 +     45824 G
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             41282 1 -     64574 G
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4355 1 -     23631 G
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 24499 1 -     61129 G
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5421843 1 -   5703754 G
i Sapajus_apella.ctg103                                  I 18 C 0
s Sapajus_macrocephalus.k141_351809                          57084 1 -     80660 G
i Sapajus_macrocephalus.k141_351809                      I 18 C 0
s Semnopithecus_entellus.k141_1672505                         1219 1 -     12572 g
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      28069 1 +     39453 g
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            8587 1 +     27826 G
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             8109 1 -     19483 g
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      1410 1 -     12762 g
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           1271 1 +     13763 G
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     1375 1 -     30804 G
i Sigmodon_hispidus.SigHis_scaffold_42075                I 7 C 0
s Theropithecus_gelada.CM009954.1                        186429757 1 + 186847797 g
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106490 1 +    114563 G
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 6 C 0
s Trachypithecus_auratus.k141_722599                         12160 1 -     20410 g
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      1274 1 -     12674 g
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       12261 1 +     19930 g
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       8672 1 -     19997 G
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48811 1 -     60166 g
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        16283 1 -     27529 G
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     16227 1 -     18194 G
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9939 1 -     21137 G
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    8642 1 -     10723 G
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7814 1 +      9834 g
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        26127 1 +     32220 g
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5940229 1 +   6242583 g
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        9480 1 +     20839 g
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2156903 1 +   4065304 G
i Tupaia_chinensis.KB320699.1                            I 3 C 0
s Tupaia_tana.TupTan_flattened_line_97126                    10350 1 -     10553 G
i Tupaia_tana.TupTan_flattened_line_97126                I 3 C 0
s Xerus_inauris.XerIna_scaffold_2302                          2189 1 +    224448 g
i Xerus_inauris.XerIna_scaffold_2302                     I 6 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      15969 1 +     63895 A
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Mus_spretus.CM004101.1                                  90753489 6 - 130317789 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 11914 8 -     43706 I
e Vicugna_pacos.KN270157.1                                 5372888 24 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851544 0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   54418 2 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15738997 2 +  33153633 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_40725                     743 2 +     27266 I
e Tonatia_saurophila.TonSau_scaffold_294                     82328 2 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   7465 2 +      8208 I
e Tarsius_wallacei.k141_254427                                1877 3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080 3 +     70052 I
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73727 2 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                11934 2 +     41958 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sus_scrofa.JH118708.1                                      37521 898 -     47482 I
e Suricata_suricatta.SurSur_flattened_line_6629              19450 2 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             32128 8 +     97271 I
e Spermophilus_dauricus.KZ294078.1                         1955212 5 -   3870691 I
e Sorex_araneus.JH798187.1                                13652097 17 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4859 10 +   1910179 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    154320 4 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                88943 2 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        368117 2 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  6387 2 +     55207 I
e Puma_concolor.QAVW01001104.1                            20275431 2 -  38429054 I
e Pteropus_vampyrus.KN534172.1                                7954 2 -      8028 I
e Pteropus_alecto.KB030862.1                              22977901 2 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         41654 8 +     42204 I
e Pteronotus_parnellii.KE909381.1                            16269 2 -     21811 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35492 2 +     35617 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             2883 16 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9791 2 +     63832 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13765 2 -     78924 I
e Pantholops_hodgsonii.KE114653.1                          1265806 2 -   2937107 I
e Panthera_tigris.KE722367.1                               4722359 2 -   8748460 I
e Panthera_pardus.KV860321.1                                265479 2 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  152270 2 +    230217 I
e Pan_troglodytes.CM009242.2                             189144198 0 + 189151597 C
e Ovis_canadensis.OviCan_scaffold_2572                      174888 2 -    191736 I
e Ovis_aries.CM001607.2                                   17586911 2 +  44047080 I
e Otocyon_megalotis.JAEUCK010005147.1                       463466 8 -    559221 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Orcinus_orca.KB316932.1                                  2782752 2 -  10937097 I
e Okapia_johnstoni.LVCL01S0005463.1                          77645 2 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              507796 8 -   2017862 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nyctereutes_procyonoides.CAJHUB010000658.1               9150517 8 -   9404916 I
e Noctilio_leporinus.NocLep_scaffold_251                    758976 2 +    783361 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866835 2 +   7148211 I
e Neomonachus_schauinslandi.NINY01007730.1                20308651 8 +  31847680 I
e Nannospalax_galili.KL204047.1                            2035627 0 -   3037898 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190362 2 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_281845                        1094 17 +      1835 I
e Myotis_lucifugus.GL429869.1                              3904943 16 -   4330536 I
e Myotis_davidii.KB100139.1                                1588846 16 -   6019432 I
e Myotis_brandtii.KE162005.1                                281591 16 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     72300 2 -     80779 I
e Mustela_putorius.JH418006.1                               302847 8 -  14710649 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           7949 16 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398 7 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1813 2 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 142774 2 -    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27872 2 -    437263 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7058 8 -      8324 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             35221 4 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1851541 4 +   8254450 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                16968 17 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    4366 2 +     10310 I
e Mellivora_capensis.MelCap_flattened_line_69365             11454 8 +     13704 I
e Megaderma_lyra.MegLyr_scaffold_4542                        14461 2 -    207569 I
e Marmota_marmota.CZRN01000018.1                          33104352 6 -  40650429 I
e Manis_pentadactyla.KN006162.1                              51367 2 -    317179 I
e Manis_javanica.JSZB01003497.1                              19381 2 +    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_8222                 91760 2 +     94391 I
e Lycaon_pictus.CM007581.1                                17956454 8 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268749 2 -    662738 I
e Leptonychotes_weddellii.KB714746.1                       3044191 8 +   3914936 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Lasiurus_borealis.LasBor_scaffold_32767                    17502 16 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                3055 2 -      3359 I
e Inia_geoffrensis.IniGeo_flattened_line_48101               23698 2 +     23964 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7522065 6 -   7955117 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  46124 19 +     55795 I
e Hipposideros_armiger.JXIK01000431.1                       111623 2 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18936 2 +     36099 I
e Helogale_parvula.HelPar_flattened_line_2585               243445 2 +    327341 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Gorilla_beringei.k141_3596273                              17212 0 -     32273 C
e Glis_glis.GliGli_scaffold_19807                            32063 0 +     49224 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609732 2 -    660261 I
e Felis_nigripes.FelNig_flattened_line_20823                 10662 2 -     36744 I
e Felis_catus_fca126.CM031415.1                           20196908 2 + 205367284 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Eubalaena_japonica.EubJap_flattened_line_31514             26094 2 -     44125 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           12157 2 +    133382 I
e Erinaceus_europaeus.JH835339.1                           3329325 11 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2146846 16 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16330738 8 -  41312741 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311767 2 +    607251 I
e Eidolon_helvum.KE759718.1                                  11667 2 +     11740 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8631232 2 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812483 2 +  35494412 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64595 2 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  36984 2 +     51376 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             29606 2 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_37019               4034 17 -     19598 I
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           1607 2 +     23735 I
e Condylura_cristata.JH655891.1                           17549164 2 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1578 2 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Cephalopachus_bancanus.k141_1423433                         6085 3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     94663 2 +    217609 I
e Carollia_perspicillata.CarPer_scaffold_92756                6235 2 -     11696 I
e Carlito_syrichta.NW_007259797.1                           156587 3 -    496798 I
e Capromys_pilorides.CapPil_scaffold_65020                    2117 2 -     12242 I
e Capra_hircus.CM004588.1                                 18061451 2 -  44709034 I
e Capra_aegagrus.CM003241.1                               18830731 2 +  46296322 I
e Canis_lupus_orion.HG994398.1                            18501511 8 +  63665305 I
e Canis_lupus_familiaris.chr16                            17960214 8 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9035738 8 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     1043 8 -     43241 I
e CanFam4.chr16                                           17800295 8 -  60362399 I
e Camelus_ferus.KB017975.1                                  404137 28 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2335838 28 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10003362 28 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2820103 2 +   4408762 I
e Bos_taurus.CM000203.6                                   18084435 80 +  45695690 I
e Bos_mutus.JH880303.1                                     1126353 2 -   1948126 I
e Bos_indicus.CM003047.1                                  20273797 80 +  48749331 I
e Bison_bison.KN261452.1                                    200593 2 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    27535 2 +     34529 I
e Balaenoptera_bonaerensis.DF707048.1                         3310 2 -     18090 I
e Balaenoptera_acutorostrata.KI537508.1                   15192845 2 +  23207421 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  5866 2 +     43469 I
e Aplodontia_rufa.AprRuf_scaffold_68852                      13732 5 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             99094 2 -    100397 I
e Anoura_caudifer.AnoCau_scaffold_1412                      186483 2 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676613 2 -   2318259 I
e Ailurus_fulgens.LNAC01001112.1                             80767 24 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9511710 8 -  29979442 I
e Acinonyx_jubatus.LLWD01001279.1                           828423 2 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       7956  6 +     62944 t--------g-------------------t--gtg
s Acinonyx_jubatus.LLWD01001279.1                           828425  4 -   1699592 T--------G-------------------T--C--
i Acinonyx_jubatus.LLWD01001279.1                        I 2 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     71868  4 +     87051 T--------A-------------------T--G--
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511718  4 -  29979442 T--------G-------------------T--G--
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 8 C 0
s Ailurus_fulgens.LNAC01001112.1                             80791  4 -    347723 T--------G-------------------T--G--
i Ailurus_fulgens.LNAC01001112.1                         I 24 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     75572  4 -     89534 T--------G-------------------T--G--
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Alouatta_belzebul.k141_3560514                              8718  4 +     51355 T--------G-------------------T--G--
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                1827  4 -     36483 T--------G-------------------T--G--
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              12279  4 +     28687 T--------G-------------------T--G--
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                  792  4 +     27940 T--------G-------------------T--G--
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            1836  4 -      9457 T--------G-------------------T--G--
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                              792  4 +     30492 T--------G-------------------T--G--
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              4787  4 +     47717 T--------G-------------------T--G--
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              1519  4 +      5663 T--------G-------------------T--G--
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             15971  4 +     50774 T--------G-------------------T--G--
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          676615 14 -   2318259 tgtgtatgtg-------------------tgtg--
i Ammotragus_lervia.NIVO01071767.1                       I 2 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      186485  4 +    412891 T--------A-------------------C--G--
i Anoura_caudifer.AnoCau_scaffold_1412                   I 2 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             99096 12 -    100397 TGTGTGTGTG-------------------T--G--
i Antilocapra_americana.AntAmePen_scaffold_12469         I 2 C 0
s Aotus_azarae.k141_3104676                                  16964  4 -     33861 T--------G-------------------T--G--
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            16961  4 -     34016 T--------G-------------------T--G--
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299388  4 -   5030052 t--------g-------------------t--g--
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             16997  4 -     34685 T--------G-------------------T--G--
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               30122  4 -     47192 T--------G-------------------T--G--
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13737  4 +     20879 T--------A-------------------T--G--
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 5 I 1
s Arctocebus_calabarensis.k141_1648548                         500  4 +      5281 C--------A-------------------T--G--
i Arctocebus_calabarensis.k141_1648548                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5868  4 +     43469 T--------A-------------------T--G--
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 2 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15192847  4 +  23207421 t--------g-------------------t--g--
i Balaenoptera_acutorostrata.KI537508.1                  I 2 I 22
s Balaenoptera_bonaerensis.DF707048.1                         3312  4 -     18090 t--------g-------------------t--g--
i Balaenoptera_bonaerensis.DF707048.1                    I 2 I 22
s Beatragus_hunteri.BeaHun_scaffold_50177                    27537 14 +     34529 TGTGTATATG-------------------TGTG--
i Beatragus_hunteri.BeaHun_scaffold_50177                I 2 C 0
s Bison_bison.KN261452.1                                    200595 33 -    288883 tgtgtatgtgtgtgtgtgatgtgtacgtgtgtg--
i Bison_bison.KN261452.1                                 I 2 C 0
s Bos_indicus.CM003028.1                                  18363499 14 - 116941312 tgtgtatgtg-------------------tgtg--
i Bos_indicus.CM003028.1                                 I 57 C 0
s Bos_mutus.JH880303.1                                     1126355 14 -   1948126 tgtgtatgtg-------------------tgtg--
i Bos_mutus.JH880303.1                                   I 2 C 0
s Bos_taurus.CM000184.6                                   18200473 14 - 114055384 tgtgtatgtg-------------------tgtg--
i Bos_taurus.CM000184.6                                  I 57 C 0
s Bubalus_bubalis.KI419123.1                               2820105 14 +   4408762 tgtggatgtg-------------------tgtg--
i Bubalus_bubalis.KI419123.1                             I 2 C 0
s Camelus_bactrianus.KN276810.1                           10003390  2 -  17673402 -----------------------------t--g--
i Camelus_bactrianus.KN276810.1                          I 28 C 0
s Camelus_dromedarius.KN272107.1                           2335866  2 -   7040546 -----------------------------t--g--
i Camelus_dromedarius.KN272107.1                         I 28 C 0
s Camelus_ferus.KB017975.1                                  404165  2 -   1652518 -----------------------------t--g--
i Camelus_ferus.KB017975.1                               I 28 C 0
s CanFam4.chr16                                           17800303  1 -  60362399 --------------------------------g--
i CanFam4.chr16                                          I 8 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     1051  1 -     43241 --------------------------------g--
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 8 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9035746  1 -   9314153 --------------------------------g--
i Canis_lupus_dingo.QKWQ01000480.1                       I 8 C 0
s Canis_lupus_familiaris.chr16                            17960222  1 -  59632846 --------------------------------g--
i Canis_lupus_familiaris.chr16                           I 8 C 0
s Canis_lupus_orion.HG994398.1                            18501519  1 +  63665305 --------------------------------g--
i Canis_lupus_orion.HG994398.1                           I 8 C 0
s Callibella_humilis.k141_10318                                747  1 +     27907 T----------------------------------
i Callibella_humilis.k141_10318                          C 0 C 0
s Callimico_goeldii.k141_737284                                387  1 -     31217 T----------------------------------
i Callimico_goeldii.k141_737284                          I 2 C 0
s Callithrix_geoffroyi.k119_69176                              683  1 +      5377 T----------------------------------
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592544  1 - 189096842 T----------------------------------
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1358  1 -     12329 T----------------------------------
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Capra_aegagrus.CM003241.1                               18830733 14 +  46296322 tgtgtatgtg-------------------tgtg--
i Capra_aegagrus.CM003241.1                              I 2 C 0
s Capra_hircus.CM004588.1                                 18061453 14 -  44709034 tgtgtatgtg-------------------tgtg--
i Capra_hircus.CM004588.1                                I 2 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6237  4 -     11696 T--------A-------------------T--G--
i Carollia_perspicillata.CarPer_scaffold_92756           I 2 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138414  4 +    179628 A--------G-------------------T--G--
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     94665  4 +    217609 T--------G-------------------T--G--
i Catagonus_wagneri.CatWag_scaffold_2839                 I 2 I 29
s Cebuella_niveiventris.k141_280505                          14457  1 +     15466 A----------------------------------
i Cebuella_niveiventris.k141_280505                      C 0 C 0
s Cebuella_pygmaea.k141_793006                                 384  1 -     15088 T----------------------------------
i Cebuella_pygmaea.k141_793006                           C 0 C 0
s Cebus_albifrons.Contig27                                25653890  4 +  26074798 T--------G-------------------T--G--
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                1828  4 +     28840 T--------G-------------------T--G--
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 1557  4 +     14051 T--------G-------------------T--G--
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1580  4 -      8501 A--------G-------------------C--G--
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       I 2 C 0
s Chinchilla_lanigera.JH722012.1                           1254002  4 +   2543920 T--------T-------------------T--G--
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2206961                           2164  4 -     15524 T--------G-------------------T--G--
i Chiropotes_albinasus.k141_2206961                      C 0 I 1
s Colobus_angolensis.KN981557.1                            1911720  4 +   2368649 t--------g-------------------t--g--
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949972  4 + 200372422 T--------G-------------------T--G--
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              38254  4 +     84244 T--------G-------------------T--G--
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549166  4 -  53390261 T--------G-------------------T--G--
i Condylura_cristata.JH655891.1                          I 2 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 51146  4 +     63868 T--------G-------------------T--G--
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11668591  4 + 224834208 t--------g-------------------t--g--
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               4051  2 -     19598 T--------A-------------------------
i Crocidura_indochinensis.CroInd_scaffold_37019          I 17 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29608  3 -     87169 T--------G-------------------T-----
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 2 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    838191  4 +   1526836 T--------G-------------------T--G--
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            64597  4 +   2246927 A--------G-------------------T--G--
i Dasypus_novemcinctus.JH564415.1                        I 2 C 0
s Delphinapterus_leucas.KZ290073.1                        16812485  4 +  35494412 t--------g-------------------t--g--
i Delphinapterus_leucas.KZ290073.1                       I 2 I 32
s Desmodus_rotundus.KZ672289.1                             8631234  4 +  20541912 t--------a-------------------c--g--
i Desmodus_rotundus.KZ672289.1                           I 2 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37475  4 +     67921 T--------T-------------------T--G--
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Eidolon_helvum.KE759718.1                                  11669  2 +     11740 T--------G-------------------------
i Eidolon_helvum.KE759718.1                              I 2 I 2
s Elaphurus_davidianus.JRFZ01104969.1                       311769 12 +    607251 tgtgtatgtg-------------------t--g--
i Elaphurus_davidianus.JRFZ01104969.1                    I 2 C 0
s Ellobius_lutescens.LOEQ01008920.1                          21603  4 -    110024 t--------g-------------------t--g--
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                            1509  4 +      8657 t--------g-------------------t--g--
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16330746  4 -  41312741 T--------G-------------------T--A--
i Enhydra_lutris.KZ291758.1                              I 8 C 0
s Eptesicus_fuscus.JH977646.1                              2146862  6 -  14770903 tgt------g-------------------t--g--
i Eptesicus_fuscus.JH977646.1                            I 16 C 0
s Erinaceus_europaeus.JH835339.1                           3329336  4 -   7059049 C--------C-------------------T--A--
i Erinaceus_europaeus.JH835339.1                         I 11 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12159  4 +    133382 t--------G-------------------T--G--
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 2 I 22
s Eubalaena_japonica.EubJap_flattened_line_31514             26096  4 -     44125 t--------g-------------------t--g--
i Eubalaena_japonica.EubJap_flattened_line_31514         I 2 I 38
s Felis_catus.CM001381.2                                  20238067  4 + 206538554 T--------G-------------------T--C--
i Felis_catus.CM001381.2                                 I 2 C 0
s Felis_catus_fca126.CM031415.1                           20196910  4 + 205367284 T--------G-------------------T--C--
i Felis_catus_fca126.CM031415.1                          I 2 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 10664  4 -     36744 T--------G-------------------T--C--
i Felis_nigripes.FelNig_flattened_line_20823             I 2 C 0
s Fukomys_damarensis.KN121974.1                             851515  4 +   3816255 t--------t-------------------t--g--
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg2040                                     429672  4 -    453645 C--------A-------------------T--G--
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             7362  4 +     11339 C--------A-------------------T--G--
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            4651  4 +     41679 C--------A-------------------T--G--
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               2311  4 -      9135 T--------A-------------------T--G--
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     609734 12 -    660261 tgtgtatgtg-------------------t--g--
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 2 C 0
s Gorilla_beringei.k141_3596273                              17212  5 -     32273 ---------G-------------------T--GTG
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186339348  6 + 186649187 t--------g-------------------t--gtg
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33727  4 +     78134 T--------A-------------------T--G--
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243447  4 +    327341 T--------G-------------------T--G--
i Helogale_parvula.HelPar_flattened_line_2585            I 2 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18938 14 +     36099 TGTGTATGTG-------------------TGTG--
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 2 C 0
s Heterocephalus_glaber.JH602082.1                        20663286  4 +  22651954 T--------T-------------------T--G--
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       111625 12 +   1711038 t--------gt-------atgtg--cg--t--g--
i Hipposideros_armiger.JXIK01000431.1                    I 2 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188                195 12 +      9903 T--------G-----------TGAGTGTGT--G--
i Hipposideros_galeritus.HipGal_scaffold_101188          N 0 C 0
s Hoolock_leuconedys.ctg274                                    436014 12 +    630532 tatgtgtgtg-------------------t--g--
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46143  4 +     55795 T--------G-------------------T--G--
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 19 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84169 12 +    135385 T--------T-----------CGTGTGTGT--C--
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               23700  4 +     23964 T--------G-------------------T--G--
i Inia_geoffrensis.IniGeo_flattened_line_48101           I 2 I 24
s Jaculus_jaculus.JH725527.1                               8278234  4 -   9596543 T--------G-------------------T--G--
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                3057  4 -      3359 t--------g-------------------t--g--
i Kogia_breviceps.KogBre_flattened_line_192630           I 2 I 38
s Lasiurus_borealis.LasBor_scaffold_32767                    17518  4 -     42476 T--------G-------------------T--G--
i Lasiurus_borealis.LasBor_scaffold_32767                I 16 C 0
s Leontocebus_fuscicollis.k141_1820339                        9119  2 +     64341 T--------G-------------------------
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           1459  4 -     35062 T--------G-------------------T--G--
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        9146  4 +     35603 T--------G-------------------T--G--
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    30763  4 +     38576 T--------G-------------------T--G--
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         27467  4 +     66356 T--------G-------------------T--G--
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3044199  4 +   3914936 T--------G-------------------T--G--
i Leptonychotes_weddellii.KB714746.1                     I 8 C 0
s Lepus_americanus.LepAme_scaffold_107385                     7871  4 -     14121 A--------G-------------------T--G--
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             268751  4 -    662738 t--------g-------------------t--g--
i Lipotes_vexillifer.KE559953.1                          I 2 I 34
s Loris_lydekkerianus.k141_399337                            17696  4 -     33856 C--------A-------------------T--G--
i Loris_lydekkerianus.k141_399337                        C 0 C 0
s Loris_tardigradus.ctg83                                  1015407  4 +   6120653 C--------G-------------------T--G--
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17956462  1 -  59628241 --------------------------------g--
i Lycaon_pictus.CM007581.1                               I 8 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91762  2 +     94391 t--------g-------------------------
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 2 I 1
s Manis_javanica.JSZB01003497.1                              19383  4 +    737560 T--------G-------------------T--G--
i Manis_javanica.JSZB01003497.1                          I 2 C 0
s Manis_pentadactyla.KN006162.1                              51369  4 -    317179 T--------G-------------------T--G--
i Manis_pentadactyla.KN006162.1                          I 2 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        14463  5 -    207569 G--------T------------------GT--G--
i Megaderma_lyra.MegLyr_scaffold_4542                    I 2 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             11462  4 +     13704 T--------G-------------------T--G--
i Mellivora_capensis.MelCap_flattened_line_69365         I 8 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 33831  4 +    140813 T--------G-------------------T--G--
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12183287  4 -  29670104 T--------G-------------------T--G--
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    4368  4 +     10310 T--------C-------------------T--G--
i Mesoplodon_bidens.MesBid_scaffold_108144               I 2 I 22
s Mico_argentatus.k141_1024458                                 384  1 -     20047 T----------------------------------
i Mico_argentatus.k141_1024458                           C 0 C 0
s Mico_humeralifer.k141_1346949                                797  1 +      1399 T----------------------------------
i Mico_humeralifer.k141_1346949                          C 0 C 0
s Mico_schneideri.k141_916733                                        384  1 +      5107 T----------------------------------
i Mico_schneideri.k141_916733                                  C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                16985  4 -     19307 T--------A-------------------T--G--
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 17 C 0
s Microtus_ochrogaster.CM001695.1                         11261586  4 -  27267610 T--------G-------------------T--G--
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         7066  4 -      8324 T--------G-------------------T--G--
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 8 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    27874  4 -    437263 t--------G-------------------T--G--
i Monodon_monoceros.MonMon_M_scaffold_103                I 2 I 26
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142776  4 -    366855 T--------A-------------------T--G--
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 2 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   1815 12 +     82753 TGTGTATGTG-------------------T--G--
i Moschus_moschiferus.MosMos_scaffold_13123              I 2 C 0
s Murina_feae.MurFea_scaffold_85699                           7965  4 +     14753 T--------G-------------------C--G--
i Murina_feae.MurFea_scaffold_85699                      I 16 I 11
s Mus_caroli.LT608237.1                                   84362449  4 - 120012414 T--------A-------------------C--G--
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87651434  4 - 129401213 T--------G-------------------T--G--
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31356092  4 -  89631738 t--------g-------------------t--g--
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90753495  4 - 130317789 T--------G-------------------T--G--
i Mus_spretus.CM004101.1                                 I 6 C 0
s Mustela_putorius.JH418006.1                               302855  4 -  14710649 t--------g-------------------t--g--
i Mustela_putorius.JH418006.1                            I 8 C 0
s Myotis_brandtii.KE162005.1                                281607  4 -  10118263 t--------g-------------------t--g--
i Myotis_brandtii.KE162005.1                             I 16 I 11
s Myotis_davidii.KB100139.1                                1588862  4 -   6019432 t--------g-------------------t--g--
i Myotis_davidii.KB100139.1                              I 16 I 11
s Myotis_lucifugus.GL429869.1                              3904959  4 -   4330536 t--------g-------------------t--g--
i Myotis_lucifugus.GL429869.1                            I 16 I 11
s Myotis_myotis.MyoMyo_scaffold_281845                        1111  4 +      1835 T--------G-------------------T--G--
i Myotis_myotis.MyoMyo_scaffold_281845                   I 17 I 11
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190364  4 +    196477 A--------G-------------------T--G--
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 2 I 2
s Nasalis_larvatus.k141_413338                               16347  4 +     21681 T--------G-------------------T--G--
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308659  4 +  31847680 T--------G-------------------T--G--
i Neomonachus_schauinslandi.NINY01007730.1               I 8 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5866837  4 +   7148211 t--------g-------------------t--g--
i Neophocaena_asiaeorientalis.KZ687982.1                 I 2 I 32
s Noctilio_leporinus.NocLep_scaffold_251                    758978  4 +    783361 T--------A-------------------T--G--
i Noctilio_leporinus.NocLep_scaffold_251                 I 2 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150525  4 -   9404916 t--------g-------------------t--g--
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 8 C 0
s Nycticebus_bengalensis.LG01                            102595909  4 - 196305487 C--------A-------------------T--G--
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1514628                             1376  4 -      5837 C--------A-------------------T--G--
i Nycticebus_coucang.k141_1514628                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771831  4 + 199412804 C--------A-------------------T--G--
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1365316  4 +   3988456 C--------A-------------------T--A--
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              507804  4 -   2017862 T--------G-------------------T--A--
i Odobenus_rosmarus.KB229312.1                           I 8 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          77647 12 -    150152 tgtgtatgtg-------------------t--g--
i Okapia_johnstoni.LVCL01S0005463.1                      I 2 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   26237  4 +     28053 T--------G-------------------T--G--
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    81276  3 +    102263 T--------G-------------------T-----
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2782754  4 -  10937097 t--------g-------------------t--g--
i Orcinus_orca.KB316932.1                                I 2 I 24
s Oryctolagus_cuniculus.CM000791.1                        67148772  4 + 174332312 a--------g-------------------t--g--
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       463474  4 -    559221 t--------g-------------------t--g--
i Otocyon_megalotis.JAEUCK010005147.1                    I 8 C 0
s Otolemur_crassicaudatus.k141_222918                         7164  4 +      8798 C--------A-------------------T--G--
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             699403  4 -   1103335 c--------a-------------------t--g--
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   17586913 14 +  44047080 tgtgtatgtg-------------------tgtg--
i Ovis_aries.CM001607.2                                  I 2 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      174890 14 -    191736 tGTGTATGTG-------------------TGTG--
i Ovis_canadensis.OviCan_scaffold_2572                   I 2 C 0
s Pan_paniscus.KQ411613.1                                    45299  6 +     80009 t--------g-------------------t--gtg
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189144198  5 + 189151597 ---------g-------------------t--gtg
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152272  4 +    230217 T--------G-------------------T--C--
i Panthera_onca.PanOnc_flattened_line_3271               I 2 C 0
s Panthera_pardus.KV860321.1                                265481  4 +  18783137 T--------G-------------------T--C--
i Panthera_pardus.KV860321.1                             I 2 C 0
s Panthera_tigris.KE722367.1                               4722361  4 -   8748460 T--------G-------------------T--C--
i Panthera_tigris.KE722367.1                             I 2 C 0
s Pantholops_hodgsonii.KE114653.1                          1265808 14 -   2937107 tgtgtatgtg-------------------tgtg--
i Pantholops_hodgsonii.KE114653.1                        I 2 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13767  4 -     78924 T--------G-------------------T--G--
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 2 C 0
s Perodicticus_ibeanus.k141_1182643                            181  4 -      3244 C--------A-------------------T--G--
i Perodicticus_ibeanus.k141_1182643                      C 0 C 0
s Perodicticus_potto.k141_1186926                              559  4 +     10374 C--------A-------------------T--G--
i Perodicticus_potto.k141_1186926                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18195852  3 -  18517816 T--------G-------------------T-----
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     29199  4 -     29689 A--------T-------------------T--G--
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               9793  4 +     63832 t--------g-------------------t--g--
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 2 I 30
s Piliocolobus_badius.k141_1234363                           44839  4 +     62158 T--------G-------------------T--G--
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        39586  4 +     89929 t--------g-------------------t--g--
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            41002  4 +     51399 T--------G-------------------T--G--
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14297243  4 -  14605196 t--------g-------------------t--g--
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2899  2 +     22620 T--------G-------------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 16 I 7
s Platanista_gangetica.PlaMin_flattened_line_32310           35494  4 +     35617 T--------G-------------------T--G--
i Platanista_gangetica.PlaMin_flattened_line_32310       I 2 I 22
s Pongo_abelii.CM009266.2                                189132344  4 + 189387572 t--------g-------------------t--g--
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9571951  4 +   9816681 T--------G-------------------T--G--
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               74522  2 -     81375 -----------------------------t--g--
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              6343  2 +     19060 -----------------------------T--G--
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            11477  4 -     21651 T--------G-------------------T--G--
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            16271  4 -     21811 T--------A-------------------T--C--
i Pteronotus_parnellii.KE909381.1                        I 2 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41662  4 +     42204 T--------G-------------------T--A--
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 8 C 0
s Pteropus_alecto.KB030862.1                              22977903  2 +  28871421 t--------g-------------------------
i Pteropus_alecto.KB030862.1                             I 2 I 2
s Pteropus_vampyrus.KN534172.1                                7956  2 -      8028 t--------g-------------------------
i Pteropus_vampyrus.KN534172.1                           I 2 I 2
s Puma_concolor.QAVW01001104.1                            20275433  4 -  38429054 T--------G-------------------T--C--
i Puma_concolor.QAVW01001104.1                           I 2 C 0
s Pygathrix_cinerea.k141_1153803                             16329  4 -     91421 T--------G-------------------T--G--
i Pygathrix_cinerea.k141_1153803                         C 0 I 2
s Pygathrix_nigripes_b.ctg100                                 7610449  4 +   7812017 T--------G-------------------T--G--
i Pygathrix_nigripes_b.ctg100                               C 0 I 2
s Pygathrix_nigripes_a.k141_215492                             16328  4 -     72585 T--------G-------------------T--G--
i Pygathrix_nigripes_a.k141_215492                         C 0 I 2
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6389 12 +     55207 TGTGTATGTG-------------------T--G--
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 2 C 0
s Rattus_norvegicus.chr16                                 53571683  4 +  90668790 t--------g-------------------t--g--
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        368119  2 -   3329780 t--------g-------------------------
i Rhinolophus_sinicus.LVEH01000134.1                     I 2 I 4
s Rhinopithecus_bieti.k119_217274                             8039  4 -     11128 t--------g-------------------t--g--
i Rhinopithecus_bieti.k119_217274                        C 0 I 8
s Rhinopithecus_roxellana.NC_044550.1                     91237388  4 - 195417433 t--------g-------------------t--g--
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7673044  4 +   7961872 t--------g-------------------t--g--
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88945  2 -     96226 T--------G-------------------------
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 2 I 2
s Saguinus_bicolor.k141_8081                                  2429  4 +     42994 T--------G-------------------T--G--
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                             1128  4 +      2253 T--------G-------------------T--G--
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               1557  4 -      8737 T--------G-------------------T--G--
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                              1210  4 +      2343 T--------G-------------------T--G--
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209476087  4 + 209938924 T--------G-------------------T--G--
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                 533  4 -      7576 T--------G-------------------T--G--
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119952167  4 - 121099817 t--------g-------------------t--g--
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24509  4 +     46362 T--------G-------------------T--G--
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               24604  4 +     45824 T--------G-------------------T--G--
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             41283  4 -     64574 T--------G-------------------T--G--
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4356  4 -     23631 T--------G-------------------T--G--
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 24500  4 -     61129 T--------G-------------------T--G--
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5421844  4 -   5703754 T--------G-------------------T--G--
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          57085  4 -     80660 T--------G-------------------T--G--
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154324  4 -    313613 T--------G-------------------T--G--
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 4 C 0
s Semnopithecus_entellus.k141_1672505                         1220  4 -     12572 t--------g-------------------t--g--
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      28070  4 +     39453 t--------g-------------------t--g--
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            8588  4 +     27826 T--------G-------------------T--G--
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             8110  4 -     19483 t--------g-------------------t--g--
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      1411  4 -     12762 t--------g-------------------t--g--
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           1272  4 +     13763 T--------G-------------------T--G--
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     1376  3 -     30804 T--------G-------------------T-----
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 I 1
s Solenodon_paradoxus.SolPar_flattened_line_126               4869  4 +   1910179 T--------A-------------------T--G--
i Solenodon_paradoxus.SolPar_flattened_line_126          I 10 C 0
s Sorex_araneus.JH798187.1                                13652114  4 -  18376816 t--------a-------------------t--g--
i Sorex_araneus.JH798187.1                               I 17 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             32136  4 +     97271 T--------G-------------------T--G--
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 8 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              19452  4 -    196729 T--------G-------------------T--G--
i Suricata_suricatta.SurSur_flattened_line_6629          I 2 C 0
s Sus_scrofa.CM000828.4                                    6812221  4 +  69701581 t--------g-------------------t--g--
i Sus_scrofa.CM000828.4                                  I 148 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                11936  4 +     41958 T--------G-------------------T--G--
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 2 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73729  4 +    116680 A--------G-------------------T--G--
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 2 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106491  4 +    114563 A--------T-------------------T--G--
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   7467  4 +      8208 A--------G-------------------T--G--
i Tolypeutes_matacus.TolMat_scaffold_228639              I 2 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     82330  4 +    610378 T--------A-------------------T--G--
i Tonatia_saurophila.TonSau_scaffold_294                 I 2 C 0
s Trachypithecus_auratus.k141_722599                         12161  4 -     20410 t--------g-------------------t--g--
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      1275  4 -     12674 t--------g-------------------t--g--
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       12262  4 +     19930 t--------g-------------------t--g--
i Trachypithecus_cristatus.k141_580354                   C 0 I 6
s Trachypithecus_francoisi.k141_1412647                       8673  4 -     19997 T--------G-------------------T--G--
i Trachypithecus_francoisi.k141_1412647                  C 0 I 2
s Trachypithecus_geei.k141_277701                            48812  4 -     60166 t--------g-------------------t--g--
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        16284  4 -     27529 T--------G-------------------T--G--
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     16228  4 -     18194 T--------G-------------------T--G--
i Trachypithecus_hatinhensis.k141_143409                 C 0 I 4
s Trachypithecus_laotum.k141_907409                           9940  4 -     21137 T--------G-------------------T--G--
i Trachypithecus_laotum.k141_907409                      C 0 I 4
s Trachypithecus_leucocephalus.k141_587342                    8643  4 -     10723 T--------G-------------------T--G--
i Trachypithecus_leucocephalus.k141_587342               C 0 I 2
s Trachypithecus_melamera.k141_434728                         7815  4 +      9834 t--------g-------------------t--g--
i Trachypithecus_melamera.k141_434728                    C 0 I 6
s Trachypithecus_obscurus.k141_190785                        26128  4 +     32220 t--------g-------------------t--G--
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5940230  4 +   6242583 t--------g-------------------t--g--
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        9481  4 +     20839 t--------g-------------------t--g--
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                     745 12 +     27266 TGTGTATCTT-------------------T--G--
i Tragulus_javanicus.TraJav_scaffold_40725               I 2 C 0
s Tupaia_chinensis.KB320699.1                              2156904  4 +   4065304 T--------G-------------------T--G--
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_97126                    10351  4 -     10553 T--------G-------------------T--G--
i Tupaia_tana.TupTan_flattened_line_97126                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15738999  4 +  33153633 t--------g-------------------t--g--
i Tursiops_truncatus.MRVK01000835.1                      I 2 I 24
s Uropsilus_gracilis.UroGra_scaffold_12083                   54420  4 -     77625 T--------T-------------------T--G--
i Uropsilus_gracilis.UroGra_scaffold_12083               I 2 C 0
s Vicugna_pacos.KN270157.1                                 5372912  2 -   5488506 -----------------------------c--g--
i Vicugna_pacos.KN270157.1                               I 24 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 11922  4 -     43706 t--------g-------------------t--g--
i Vulpes_lagopus.VulLag_flattened_line_30954             I 8 C 0
s Xerus_inauris.XerIna_scaffold_2302                          2190  4 +    224448 t--------g-------------------t--g--
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      15970  4 +     63895 T--------A-------------------T--G--
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851544  0 -   5085361 C
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Theropithecus_gelada.CM009954.1                        186429758  0 + 186847797 C
e Tarsius_wallacei.k141_254427                                1877  3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080  3 +     70052 I
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spermophilus_dauricus.KZ294078.1                         1955212  5 -   3870691 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Papio_ursinus.k141_5274964                                  1120  0 -     11374 C
e Papio_papio.k141_802527                                    10123  0 +     27711 C
e Papio_kindae.k141_1936966                                   6830  0 +     41871 C
e Papio_hamadryas.Contig39                                20564898  0 +  20919399 C
e Papio_cynocephalus.k141_4307930                             8090  0 +     20448 C
e Papio_anubis.CM001495.2                                183444440  0 + 183742232 C
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nannospalax_galili.KL204047.1                            2035627  0 -   3037898 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     72300  2 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Miopithecus_ogouensis.k141_534055                          10326  0 -     28506 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             35221  4 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1851541  4 +   8254450 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Marmota_marmota.CZRN01000018.1                          33104352  6 -  40650429 I
e Mandrillus_sphinx.Contig270                               352762  0 +    752769 C
e Mandrillus_leucophaeus.scaffold280                      23938640  0 -  24302211 C
e Macaca_tonkeana.k141_1498238                               27049  4 -     45290 I
e Macaca_thibetana.k99_256239                                 6424  0 -     24072 C
e Macaca_silenus.Contig273                                  330966 10 -    668171 I
e Macaca_siberu.k141_635500                                   8100 10 -     14993 I
e Macaca_radiata.k141_3680011                                 8311  0 +     20474 C
e Macaca_nigra.k141_1655396                                  81310 10 +     89720 I
e Macaca_nemestrina.KQ007038.1                            25459103 16 -  25927173 I
e Macaca_mulatta.NC_041758.1                             186840551  0 + 187317192 C
e Macaca_maura.k141_2733130                                  25462  4 +     37952 I
e Macaca_leonina.k141_3550399                                16886 10 -     29190 I
e Macaca_fuscata.k119_255327                                  7424  0 -     23192 C
e Macaca_fascicularis.k141_814140                            81733  0 -    114318 C
e Macaca_cyclopis.k119_18836                                 13953  0 -     26193 C
e Macaca_assamensis.Contig5                               59677437  0 +  60120075 C
e Macaca_arctoides.k141_2326796                               8178  0 +     40492 C
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lophocebus_aterrimus.ctg367                              1438363  4 +   1826925 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7522065  6 -   7955117 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Glis_glis.GliGli_scaffold_19807                            32063  0 +     49224 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erythrocebus_patas.Contig38                             21206411  0 -  21539334 C
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  36984  2 +     51376 I
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           1607  2 +     23735 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chlorocebus_sabaeus.CM001947.1                         135423242  0 + 135778131 C
e Chlorocebus_pygerythrus.k141_1025673                       16241  0 -     50209 C
e Chlorocebus_aethiops.ctg25                              18429805  0 -  18827391 C
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Cercopithecus_roloway.k141_2581234                          1866  0 +     14005 C
e Cercopithecus_pogonias.k141_822820                         15823  0 +     17596 C
e Cercopithecus_petaurista.k141_807961                       15847  4 -     27947 I
e Cercopithecus_nictitans.k141_1119862                        1298  0 +     13442 C
e Cercopithecus_neglectus.k141_2526306                       41047  0 -     53127 C
e Cercopithecus_mona.ctg39                                21223928  0 -  21565898 C
e Cercopithecus_albogularis.ctg5                                38818239  0 +  39242232 C
e Cercopithecus_lowei.k141_1854285                            4694  0 -     17152 C
e Cercopithecus_hamlyni.k141_187466                          15828  0 -     27936 C
e Cercopithecus_diana.k141_1150327                            7906  0 -     20078 C
e Cercopithecus_cephus.k141_1078548                          13160  0 +     29689 C
e Cercopithecus_ascanius.k141_1024104                        10180  0 -     20310 C
e Cercocebus_torquatus.k141_3057011                          10012  0 +     27781 C
e Cercocebus_lunulatus.k141_3342297                           1911  0 -     14043 C
e Cercocebus_chrysogaster.k141_1540778                        1322  0 +     17872 C
e Cercocebus_atys.KQ010504.1                               4476820  0 +   4669795 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Cephalopachus_bancanus.k141_1423433                         6085  3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Carlito_syrichta.NW_007259797.1                           156587  3 -    496798 I
e Capromys_pilorides.CapPil_scaffold_65020                    2117  2 -     12242 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Allochrocebus_solatus.k141_166128                           7153  0 -     12518 C
e Allochrocebus_preussi.k141_1442296                          6301  0 -     18505 C
e Allochrocebus_lhoesti.k141_4309873                         15803  0 -     28001 C
e Allenopithecus_nigroviridis.k141_3361533                   15883  0 -     52922 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       7962  8 +     62944 t----------g--------------------t----------g----------t--g------t-g
s Acinonyx_jubatus.LLWD01001279.1                           828429  8 -   1699592 T----------A--------------------T----------G----------T--G------T-A
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 1
s Acomys_cahirinus.AcoCah_scaffold_12655                     71872  9 +     87051 T----------G--------------------T---------TG----------T--C------A-G
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511722  8 -  29979442 T----------A--------------------T----------G----------T--T------C-A
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 1
s Ailurus_fulgens.LNAC01001112.1                             80795  8 -    347723 T----------A--------------------T----------G----------T--T------C-A
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 1
s Allactaga_bullata.AllBul_scaffold_9566                     75576  8 -     89534 T----------G--------------------T----------G----------G--C------T-A
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   15883  8 -     52922 t----------g--------------------t----------g----------t--g------t-g
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15803  6 -     28001 T----------G--------------------T----------G----------T--G---------
i Allochrocebus_lhoesti.k141_4309873                     C 0 I 4
s Allochrocebus_preussi.k141_1442296                          6301 12 -     18505 T----------G--------------------T----------G----------T--GTGTG--T-G
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           7153 12 -     12518 T----------G--------------------T----------G----------T--GTGTG--T-G
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              8722 10 +     51355 T----------G--------------------T----------G----------TGAA------T-A
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                1831 10 -     36483 T----------G--------------------T----------G----------TGAA------T-A
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              12283 10 +     28687 T----------G--------------------T----------G----------TGAA------T-A
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                  796 10 +     27940 T----------G--------------------T----------G----------TGAA------T-A
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            1840 10 -      9457 T----------G--------------------T----------G----------TGAA------T-A
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                              796 10 +     30492 T----------G--------------------T----------G----------TGAA------T-A
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              4791 10 +     47717 T----------G--------------------T----------G----------TGAA------T-A
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              1523 10 +      5663 T----------G--------------------T----------G----------TGAA------T-A
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             15975 10 +     50774 T----------G--------------------T----------G----------TGAA------T-A
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          676629  9 -   2318259 t----------g--------------------tg---------a----------t--g------t-g
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 21
s Anoura_caudifer.AnoCau_scaffold_1412                      186489  6 +    412891 T----------G--------------------C----------G----------T--A---------
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 13
s Antilocapra_americana.AntAmePen_scaffold_12469             99108 19 -    100397 TGTGTGTCTGTG--------------------T---------GA----------T--G------T-G
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 I 21
s Aotus_azarae.k141_3104676                                  16968  8 -     33861 T----------A--------------------T----------G----------T--A------T-A
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            16965  8 -     34016 T----------A--------------------T----------G----------T--A------T-A
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299392  8 -   5030052 t----------a--------------------t----------g----------t--a------t-a
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             17001  8 -     34685 T----------A--------------------T----------G----------T--A------T-A
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               30126  8 -     47192 T----------A--------------------T----------G----------T--A------T-A
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13742  5 +     20879 -------------------------------------------A----------T--A------T-G
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 1 C 0
s Arctocebus_calabarensis.k141_1648548                         504  8 +      5281 T----------A--------------------T----------G----------T--G------T-G
i Arctocebus_calabarensis.k141_1648548                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5872  6 +     43469 T----------G--------------------C----------A----------T--G---------
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 13
s Balaenoptera_acutorostrata.KI537508.1                   15192873  8 +  23207421 t----------G--------------------C----------A----------T--A------T-G
i Balaenoptera_acutorostrata.KI537508.1                  I 22 I 1
s Balaenoptera_bonaerensis.DF707048.1                         3338  8 -     18090 t----------G--------------------C----------A----------T--A------T-G
i Balaenoptera_bonaerensis.DF707048.1                    I 22 I 1
s Beatragus_hunteri.BeaHun_scaffold_50177                    27551  9 +     34529 T----------G--------------------T---------GA----------T--G------T-G
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 21
s Bison_bison.KN261452.1                                    200628  9 -    288883 t----------g--------------------tg---------a----------t--g------t-g
i Bison_bison.KN261452.1                                 C 0 I 21
s Bos_indicus.CM003028.1                                  18363513  9 - 116941312 t----------g--------------------tg---------a----------t--g------t-g
i Bos_indicus.CM003028.1                                 C 0 I 21
s Bos_mutus.JH880303.1                                     1126369  9 -   1948126 t----------g--------------------tg---------a----------t--g------t-g
i Bos_mutus.JH880303.1                                   C 0 I 21
s Bos_taurus.CM000184.6                                   18200487  9 - 114055384 t----------g--------------------tg---------a----------t--g------t-g
i Bos_taurus.CM000184.6                                  C 0 I 21
s Bubalus_bubalis.KI419123.1                               2820119  9 +   4408762 t----------g--------------------tg---------a----------t--g------t-g
i Bubalus_bubalis.KI419123.1                             C 0 I 21
s Callibella_humilis.k141_10318                                748  9 +     27907 -----------G--------------------T----------G----------T--GTG----T-A
i Callibella_humilis.k141_10318                          C 0 C 0
s Callimico_goeldii.k141_737284                                388  7 -     31217 -----------G--------------------T----------G----------T--G------T-A
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                              684  7 +      5377 -----------G--------------------T----------G----------T--G------T-A
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592545  7 - 189096842 -----------G--------------------T----------G----------T--G------T-A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1359  7 -     12329 -----------G--------------------T----------G----------T--G------T-A
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10003392  3 -  17673402 t----------g--------------------c----------------------------------
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2335868  3 -   7040546 t----------g--------------------c----------------------------------
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  404167  3 -   1652518 t----------g--------------------c----------------------------------
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17800304  6 -  60362399 t----------a--------------------t----------g----------t--g---------
i CanFam4.chr16                                          C 0 I 477
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     1052  6 -     43241 t----------a--------------------t----------g----------t--g---------
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 I 472
s Canis_lupus_dingo.QKWQ01000480.1                         9035747  6 -   9314153 t----------a--------------------t----------g----------t--g---------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 477
s Canis_lupus_familiaris.chr16                            17960223  6 -  59632846 t----------a--------------------t----------g----------t--g---------
i Canis_lupus_familiaris.chr16                           C 0 I 472
s Canis_lupus_orion.HG994398.1                            18501520  6 +  63665305 t----------a--------------------t----------g----------t--g---------
i Canis_lupus_orion.HG994398.1                           C 0 I 477
s Capra_aegagrus.CM003241.1                               18830747  9 +  46296322 t----------g--------------------tg---------a----------t--g------t-g
i Capra_aegagrus.CM003241.1                              C 0 I 21
s Capra_hircus.CM004588.1                                 18061467  9 -  44709034 t----------g--------------------tg---------a----------t--g------t-g
i Capra_hircus.CM004588.1                                C 0 I 21
s Carollia_perspicillata.CarPer_scaffold_92756                6241  6 -     11696 T----------G--------------------C----------A----------T--A---------
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 4
s Castor_canadensis.CasCan_scaffold_2074                    138418  8 +    179628 T----------G--------------------T----------G----------T--A------T-C
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Cebuella_niveiventris.k141_280505                          14458  9 +     15466 -----------G--------------------T----------G----------T--GT----AT-A
i Cebuella_niveiventris.k141_280505                      C 0 C 0
s Cebuella_pygmaea.k141_793006                                 385  9 -     15088 -----------G--------------------T----------G----------T--GT----AT-A
i Cebuella_pygmaea.k141_793006                           C 0 C 0
s Cebus_albifrons.Contig27                                25653894  8 +  26074798 T----------G--------------------T----------G----------T--G------T-A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                1832  8 +     28840 T----------G--------------------T----------G----------T--G------T-A
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 1561  8 +     14051 T----------G--------------------T----------G----------T--G------T-A
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Cercocebus_atys.KQ010504.1                               4476820  8 +   4669795 t----------g--------------------t----------a----------t--g------t-g
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        1322  8 +     17872 T----------G--------------------T----------G----------T--G------T-G
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           1911  8 -     14043 T----------G--------------------T----------A----------T--G------T-G
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          10012  8 +     27781 T----------G--------------------T----------G----------T--G------T-G
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        10180  2 -     20310 T----------G-------------------------------------------------------
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          13160  2 +     29689 T----------G-------------------------------------------------------
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7906  4 -     20078 T----------G--------------------T----------G-----------------------
i Cercopithecus_diana.k141_1150327                       C 0 I 2
s Cercopithecus_hamlyni.k141_187466                          15828  4 -     27936 T----------G--------------------T----------G-----------------------
i Cercopithecus_hamlyni.k141_187466                      C 0 I 2
s Cercopithecus_lowei.k141_1854285                            4694  4 -     17152 T----------G--------------------T----------G-----------------------
i Cercopithecus_lowei.k141_1854285                       C 0 I 2
s Cercopithecus_albogularis.ctg5                                38818239  2 +  39242232 T----------G-------------------------------------------------------
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223928  4 -  21565898 T----------G--------------------T----------G-----------------------
i Cercopithecus_mona.ctg39                               C 0 I 2
s Cercopithecus_neglectus.k141_2526306                       41047  4 -     53127 T----------G--------------------T----------G-----------------------
i Cercopithecus_neglectus.k141_2526306                   C 0 I 2
s Cercopithecus_nictitans.k141_1119862                        1298  2 +     13442 T----------G-------------------------------------------------------
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15851  2 -     27947 T----------G-------------------------------------------------------
i Cercopithecus_petaurista.k141_807961                   I 4 C 0
s Cercopithecus_pogonias.k141_822820                         15823  4 +     17596 T----------G--------------------T----------G-----------------------
i Cercopithecus_pogonias.k141_822820                     C 0 I 2
s Cercopithecus_roloway.k141_2581234                          1866  4 +     14005 T----------G--------------------T----------G-----------------------
i Cercopithecus_roloway.k141_2581234                     C 0 I 2
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1584  8 -      8501 T----------G--------------------C----------A----------T--G------T-G
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 I 6
s Chinchilla_lanigera.JH722012.1                           1254006  8 +   2543920 T----------A--------------------T----------T----------T--G------T-A
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2206961                           2169  5 -     15524 -------------------------------------------G----------T--G------T-G
i Chiropotes_albinasus.k141_2206961                      I 1 C 0
s Chlorocebus_aethiops.ctg25                              18429805 14 -  18827391 T----------G--------------------T----------G----------T--GTGTGTGT-G
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       16241 12 -     50209 T----------G--------------------T----------G----------T--GTGTG--T-G
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135423242 12 + 135778131 t----------g--------------------t----------g----------t--g--tgtgt-g
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1911724 14 +   2368649 t----------g--------------------t----------gtgtgtg----t--g------t-g
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949976  8 + 200372422 T----------G--------------------T----------G----------T--G------T-G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              38258  8 +     84244 T----------G--------------------T----------G----------T--G------T-G
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549170  6 -  53390261 T----------G--------------------C----------A----------T--G---------
i Condylura_cristata.JH655891.1                          C 0 I 1
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1609  5 +     23735 --------------------------------T----------G----------T--G------T--
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      I 2 I 12
s Cricetomys_gambianus.CriGam_scaffold_18520                 51150  9 +     63868 T----------G--------------------T---------TG----------T--C------T-G
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11668595  9 + 224834208 t----------g--------------------t-t--------g----------t--c------t-g
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               4053  4 -     19598 -------------------------------------------A----------T--A------T--
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29611  3 -     87169 ---------------------------------------------------------G------T-A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 1
s Ctenodactylus_gundi.CteGun_scaffold_65                    838195  8 +   1526836 T----------G--------------------T----------G----------T--G------T-G
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            64601  8 +   2246927 T----------G--------------------T----------A----------T--G------T-G
i Dasypus_novemcinctus.JH564415.1                        C 0 I 12
s Delphinapterus_leucas.KZ290073.1                        16812521  8 +  35494412 T----------G--------------------C----------A----------T--A------T-G
i Delphinapterus_leucas.KZ290073.1                       I 32 I 1
s Desmodus_rotundus.KZ672289.1                             8631238  6 +  20541912 t----------g--------------------c----------a----------t--g---------
i Desmodus_rotundus.KZ672289.1                           C 0 I 13
s Dinomys_branickii.DinBra_scaffold_21862                    37479  8 +     67921 T----------G--------------------T----------G----------T--G------T-A
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Eidolon_helvum.KE759718.1                                  11673  8 +     11740 T----------G--------------------T----------G---------TT--G------C--
i Eidolon_helvum.KE759718.1                              I 2 I 12
s Elaphurus_davidianus.JRFZ01104969.1                       311781  9 +    607251 t----------g--------------------tg---------a----------t--g------t-g
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 21
s Ellobius_lutescens.LOEQ01008920.1                          21607  9 -    110024 t----------g--------------------t-t--------g----------t--c------t-g
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                            1513  9 +      8657 t----------g--------------------t-t--------g----------t--c------t-g
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16330750 10 -  41312741 T--------AAA--------------------T----------G----------T--T------C-A
i Enhydra_lutris.KZ291758.1                              C 0 I 1
s Eptesicus_fuscus.JH977646.1                              2146868  5 -  14770903 t----------g--------------------c----------a----------t------------
i Eptesicus_fuscus.JH977646.1                            C 0 I 12
s Erinaceus_europaeus.JH835339.1                           3329340  3 -   7059049 T----------G--------------------T----------------------------------
i Erinaceus_europaeus.JH835339.1                         C 0 I 1
s Erythrocebus_patas.Contig38                             21206411  8 -  21539334 T----------G--------------------T----------G----------T--G------T-G
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12185  8 +    133382 T----------G--------------------C----------A----------T--A------T-G
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 22 I 1
s Eubalaena_japonica.EubJap_flattened_line_31514             26138  8 -     44125 t----------g--------------------c----------a----------t--a------t-g
i Eubalaena_japonica.EubJap_flattened_line_31514         I 38 I 1
s Felis_catus.CM001381.2                                  20238071  8 + 206538554 T----------A--------------------T----------G----------T--G------T-A
i Felis_catus.CM001381.2                                 C 0 I 1
s Felis_catus_fca126.CM031415.1                           20196914  8 + 205367284 T----------A--------------------T----------G----------T--G------T-A
i Felis_catus_fca126.CM031415.1                          C 0 I 1
s Felis_nigripes.FelNig_flattened_line_20823                 10668  8 -     36744 T----------A--------------------T----------G----------T--G------T-A
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 1
s Fukomys_damarensis.KN121974.1                             851519 18 +   3816255 c----------a--------------------tgtgtctgtgtg----------t--g------t-a
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg2040                                     429676  8 -    453645 T----------A--------------------T----------G----------T--G------T-A
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             7366  8 +     11339 T----------A--------------------T----------G----------T--G------T-A
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            4655  8 +     41679 T----------A--------------------C----------G----------T--G------T-A
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               2315  8 -      9135 T----------G--------------------T----------G----------T--G------T-G
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     609746  9 -    660261 t----------g--------------------tg---------a----------t--g------t-g
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 I 21
s Gorilla_beringei.k141_3596273                              17217  8 -     32273 T----------G--------------------T----------G----------T--G------T-G
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186339354  8 + 186649187 t----------g--------------------t----------g----------t--g------t-g
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33731 12 +     78134 T----------G----------------GTTTT----------T----------T--G------T-G
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243451  8 +    327341 T----------A--------------------T----------G----------T--G------T-G
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 1
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18952  9 +     36099 T----------G--------------------T---------GA----------T--G------T-G
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 I 21
s Heterocephalus_glaber.JH602082.1                        20663290 18 +  22651954 T----------A--------------------GGTGcctgtgtg----------c--a------t-a
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       111637  7 +   1711038 t----------g--------------------c----------a----------t--g------t--
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 12
s Hipposideros_galeritus.HipGal_scaffold_101188                207  7 +      9903 T----------G--------------------T----------G----------T--G------T--
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 I 12
s Hoolock_leuconedys.ctg274                                    436026  8 +    630532 t----------g--------------------t----------g----------t--g------t-g
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46147  8 +     55795 T----------A--------------------T----------G----------T--G------T-A
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 1
s Hystrix_cristata.HysCri_scaffold_5660                      84181  8 +    135385 T----------G--------------------T----------G----------T--G------C-G
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7522071  3 -   7955117 ---------------------------------------------------------G------T-G
i Ictidomys_tridecemlineatus.JH393364.1                  I 6 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               23728  8 +     23964 T----------G--------------------C----------A----------T--A------T-G
i Inia_geoffrensis.IniGeo_flattened_line_48101           I 24 I 1
s Jaculus_jaculus.JH725527.1                               8278238  8 -   9596543 T----------G--------------------G----------G----------G--C------T-A
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                3099  8 -      3359 t----------g--------------------c----------a----------t--a------t-g
i Kogia_breviceps.KogBre_flattened_line_192630           I 38 I 1
s Lasiurus_borealis.LasBor_scaffold_32767                    17522  5 -     42476 T----------G--------------------C----------A----------T------------
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 78
s Leontocebus_fuscicollis.k141_1820339                        9121  6 +     64341 T----------G--------------------T----------G----------T--A---------
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           1463  6 -     35062 T----------G--------------------T----------G----------T--A---------
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        9150  6 +     35603 T----------G--------------------T----------G----------T--A---------
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    30767  8 +     38576 T----------G--------------------T----------G----------T--G------T-A
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         27471  8 +     66356 T----------G--------------------T----------G----------T--G------T-A
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3044203  8 +   3914936 T----------A--------------------T----------G----------T--T------C-A
i Leptonychotes_weddellii.KB714746.1                     C 0 I 1
s Lepus_americanus.LepAme_scaffold_107385                     7875  8 -     14121 T----------G--------------------T----------G----------C--A------C-G
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             268789  8 -    662738 T----------G--------------------C----------A----------T--A------T-G
i Lipotes_vexillifer.KE559953.1                          I 34 I 1
s Lophocebus_aterrimus.ctg367                              1438367 12 +   1826925 T----------G--------------------T----------G------TGTGT--G------T-G
i Lophocebus_aterrimus.ctg367                            I 4 C 0
s Loris_lydekkerianus.k141_399337                            17700  8 -     33856 T----------A--------------------T----------G----------T--G------T-G
i Loris_lydekkerianus.k141_399337                        C 0 C 0
s Loris_tardigradus.ctg83                                  1015411  8 +   6120653 T----------A--------------------T----------G----------T--G------T-G
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17956463  6 -  59628241 t----------a--------------------t----------g----------t--a---------
i Lycaon_pictus.CM007581.1                               C 0 I 472
s Macaca_arctoides.k141_2326796                               8178  8 +     40492 T----------G--------------------T----------G----------T--G------T-G
i Macaca_arctoides.k141_2326796                          C 0 I 4
s Macaca_assamensis.Contig5                               59677437  8 +  60120075 t----------g--------------------t----------g----------t--g------t-g
i Macaca_assamensis.Contig5                              C 0 I 10
s Macaca_cyclopis.k119_18836                                 13953  8 -     26193 t----------g--------------------t----------g----------t--g------t-g
i Macaca_cyclopis.k119_18836                             C 0 I 6
s Macaca_fascicularis.k141_814140                            81733  4 -    114318 T----------G--------------------T----------G-----------------------
i Macaca_fascicularis.k141_814140                        C 0 I 8
s Macaca_fuscata.k119_255327                                  7424  8 -     23192 T----------G--------------------T----------G----------T--G------T-G
i Macaca_fuscata.k119_255327                             C 0 I 6
s Macaca_leonina.k141_3550399                                16896  8 -     29190 t----------g--------------------t----------g----------t--g------t-g
i Macaca_leonina.k141_3550399                            I 10 C 0
s Macaca_maura.k141_2733130                                  25466  6 +     37952 --------------------------------t----------g----------t--g------t-g
i Macaca_maura.k141_2733130                              I 4 I 6
s Macaca_mulatta.NC_041758.1                             186840551  8 + 187317192 t----------g--------------------t----------g----------t--g------t-g
i Macaca_mulatta.NC_041758.1                             C 0 I 6
s Macaca_nemestrina.KQ007038.1                            25459119  8 -  25927173 t----------g--------------------t----------g----------t--g------t-g
i Macaca_nemestrina.KQ007038.1                           I 16 I 6
s Macaca_nigra.k141_1655396                                  81320  8 +     89720 t----------g--------------------t----------g----------t--g------t-g
i Macaca_nigra.k141_1655396                              I 10 I 6
s Macaca_radiata.k141_3680011                                 8311  8 +     20474 T----------G--------------------T----------G----------T--G------T-G
i Macaca_radiata.k141_3680011                            C 0 I 8
s Macaca_siberu.k141_635500                                   8110  8 -     14993 t----------g--------------------t----------g----------t--g------t-g
i Macaca_siberu.k141_635500                              I 10 I 6
s Macaca_silenus.Contig273                                  330976  8 -    668171 t----------g--------------------t----------g----------t--g------t-g
i Macaca_silenus.Contig273                               I 10 I 6
s Macaca_thibetana.k99_256239                                 6424  8 -     24072 T----------G--------------------T----------G----------T--G------T-G
i Macaca_thibetana.k99_256239                            C 0 I 8
s Macaca_tonkeana.k141_1498238                               27053  8 -     45290 t----------g--------------------t----------g----------t--g------t-g
i Macaca_tonkeana.k141_1498238                           I 4 I 6
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91765  8 +     94391 t----------g--------------------t----------gt---------t--g------C--
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 1 I 12
s Mandrillus_leucophaeus.scaffold280                      23938640  8 -  24302211 T----------G--------------------T----------G----------T--G------T-G
i Mandrillus_leucophaeus.scaffold280                     C 0 I 2
s Mandrillus_sphinx.Contig270                               352762  8 +    752769 T----------G--------------------T----------G----------T--G------T-G
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              19387  8 +    737560 T----------G--------------------A----------A----------T--G------T-G
i Manis_javanica.JSZB01003497.1                          C 0 I 1
s Manis_pentadactyla.KN006162.1                              51373  8 -    317179 T----------G--------------------A----------A----------T--G------T-A
i Manis_pentadactyla.KN006162.1                          C 0 I 1
s Marmota_marmota.CZRN01000018.1                          33104358  3 -  40650429 ---------------------------------------------------------G------T-G
i Marmota_marmota.CZRN01000018.1                         I 6 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        14468  7 -    207569 T----------C--------------------T----------G----------T--G------T--
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 12
s Mellivora_capensis.MelCap_flattened_line_69365             11466  8 +     13704 T----------A--------------------T----------G----------T--T------C-A
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 1
s Meriones_unguiculatus.MerUng_scaffold_7390                 33835  9 +    140813 T----------G--------------------T---------TG----------T--C------T-G
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12183291  9 -  29670104 T----------A--------------------T---------CG----------T--C------T-G
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    4394  8 +     10310 T----------G--------------------C----------A----------T--A------T-G
i Mesoplodon_bidens.MesBid_scaffold_108144               I 22 I 1
s Mico_argentatus.k141_1024458                                 385  9 -     20047 -----------G--------------------T----------G----------T--GTG----T-A
i Mico_argentatus.k141_1024458                           C 0 C 0
s Mico_humeralifer.k141_1346949                                798  9 +      1399 -----------G--------------------T----------G----------T--GTG----T-A
i Mico_humeralifer.k141_1346949                          C 0 C 0
s Mico_schneideri.k141_916733                                        385  9 +      5107 -----------G--------------------T----------G----------T--GTG----T-A
i Mico_schneideri.k141_916733                                  C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                16989  6 -     19307 T----------G--------------------C----------A----------T--G---------
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 13
s Microtus_ochrogaster.CM001695.1                         11261590  9 -  27267610 T----------A--------------------A---------TA----------T--C------T-G
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miopithecus_ogouensis.k141_534055                          10326  4 -     28506 T----------G--------------------T----------G-----------------------
i Miopithecus_ogouensis.k141_534055                      C 0 I 2
s Mirounga_angustirostris.MirAng_flattened_line_93702         7070  8 -      8324 T----------A--------------------T----------G----------T--T------C-A
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 1
s Monodon_monoceros.MonMon_M_scaffold_103                    27904  8 -    437263 T----------G--------------------C----------A----------T--A------T-G
i Monodon_monoceros.MonMon_M_scaffold_103                I 26 I 1
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142780  6 -    366855 A----------G--------------------T----------A----------T--G---------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 15
s Moschus_moschiferus.MosMos_scaffold_13123                   1827  9 +     82753 T----------G--------------------T---------GA----------T--G------T-G
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 21
s Mus_caroli.LT608237.1                                   84362453  9 - 120012414 C----------A--------------------G---------TG----------T--C------T-G
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87651438  9 - 129401213 C----------A--------------------A---------TG----------T--C------T-G
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31356096  9 -  89631738 t----------a--------------------g-t--------g----------t--c------t-g
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90753499  9 - 130317789 C----------A--------------------A---------TG----------T--C------T-G
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               302859  8 -  14710649 t----------a--------------------t----------g----------t--t------C-A
i Mustela_putorius.JH418006.1                            C 0 I 1
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190370  4 +    196477 ------------------------------------------------------T--G------T-G
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 2 I 12
s Nasalis_larvatus.k141_413338                               16351  2 +     21681 ----------------------------------------------------------------T-G
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308663  8 +  31847680 T----------A--------------------T----------G----------T--T------C-A
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 1
s Neophocaena_asiaeorientalis.KZ687982.1                   5866873  8 +   7148211 t----------g--------------------c----------a----------t--a------t-g
i Neophocaena_asiaeorientalis.KZ687982.1                 I 32 I 1
s Noctilio_leporinus.NocLep_scaffold_251                    758982  8 +    783361 T----------G--------------------C----------A----------T--G------G-G
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 17
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150529  6 -   9404916 t----------a--------------------t----------g----------t--g---------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 341
s Nycticebus_bengalensis.LG01                            102595913  8 - 196305487 T----------A--------------------T----------G----------T--G------T-G
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1514628                             1380  8 -      5837 T----------A--------------------T----------G----------T--G------T-G
i Nycticebus_coucang.k141_1514628                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771835  8 + 199412804 T----------A--------------------T----------G----------T--G------T-G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1365320  8 +   3988456 T----------G--------------------T----------G----------C--T------T-G
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              507808  8 -   2017862 T----------A--------------------T----------G----------T--T------C-A
i Odobenus_rosmarus.KB229312.1                           C 0 I 1
s Okapia_johnstoni.LVCL01S0005463.1                          77659  9 -    150152 t----------g--------------------tg---------a----------t--g------t-g
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 21
s Ondatra_zibethicus.OndZib_scaffold_46174                   26241  9 +     28053 T----------G--------------------T---------TA----------T--C------T-G
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    81279  9 +    102263 T----------G--------------------T---------CG----------T--C------T-G
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2782782  8 -  10937097 t----------g--------------------c----------a----------t--a------t-g
i Orcinus_orca.KB316932.1                                I 24 I 1
s Oryctolagus_cuniculus.CM000791.1                        67148776  8 + 174332312 t----------g--------------------t----------g----------c--a------c-g
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       463478  6 -    559221 t----------a--------------------t----------g----------t--g---------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 482
s Otolemur_crassicaudatus.k141_222918                         7168  8 +      8798 T----------A--------------------T----------G----------T--G------T-A
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             699407  8 -   1103335 t----------a--------------------t----------g----------t--g------t-a
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   17586927  9 +  44047080 t----------g--------------------tg---------a----------c--g------t-g
i Ovis_aries.CM001607.2                                  C 0 I 21
s Ovis_canadensis.OviCan_scaffold_2572                      174904  9 -    191736 T----------G--------------------T---------GA----------T--G------T-G
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 I 21
s Pan_paniscus.KQ411613.1                                    45305  8 +     80009 t----------g--------------------t----------g----------t--g------t-g
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189144203  8 + 189151597 t----------g--------------------t----------g----------t--g------t-g
i Pan_troglodytes.CM009242.2                             C 0 I 13
s Panthera_onca.PanOnc_flattened_line_3271                  152276  8 +    230217 T----------A--------------------T----------G----------T--G------T-A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 1
s Panthera_pardus.KV860321.1                                265485  8 +  18783137 T----------A--------------------T----------G----------T--G------T-A
i Panthera_pardus.KV860321.1                             C 0 I 1
s Panthera_tigris.KE722367.1                               4722365  8 -   8748460 T----------A--------------------T----------G----------T--G------T-A
i Panthera_tigris.KE722367.1                             C 0 I 1
s Pantholops_hodgsonii.KE114653.1                          1265822  9 -   2937107 t----------g--------------------tg---------a----------t--g------t-g
i Pantholops_hodgsonii.KE114653.1                        C 0 I 21
s Papio_anubis.CM001495.2                                183444440 12 + 183742232 t----------g--------------------t----------gtgtg------t--g------t-g
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             8090 12 +     20448 T----------G--------------------T----------G------TGTGT--G------T-G
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20564898 12 +  20919399 T----------G--------------------T----------G------TGTGT--G------T-G
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6830 12 +     41871 T----------G--------------------T----------G------TGTGT--G------T-G
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    10123 12 +     27711 T----------G--------------------T----------G------TGTGT--G------T-G
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  1120 12 -     11374 T----------G--------------------T----------G------TGTGT--G------T-G
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13771  8 -     78924 T----------A--------------------T----------G----------T--G------T-A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 1
s Perodicticus_ibeanus.k141_1182643                            185  8 -      3244 T----------A--------------------T----------G----------T--G------T-G
i Perodicticus_ibeanus.k141_1182643                      C 0 C 0
s Perodicticus_potto.k141_1186926                              563  8 +     10374 T----------A--------------------T----------G----------T--G------T-G
i Perodicticus_potto.k141_1186926                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18195855  9 -  18517816 T----------G--------------------T---------TG----------T--C------T-G
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     29203 18 -     29689 C----------A--------------------TGTATCTGTGTG----------T--A------T-A
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               9827  8 +     63832 t----------g--------------------c----------a----------t--a------t-g
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 30 I 1
s Piliocolobus_badius.k141_1234363                           44843  6 +     62158 --------------------------------T----------G----------T--G------T-G
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        39590  8 +     89929 t----------g--------------------t----------g----------t--g------t-g
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            41006  6 +     51399 --------------------------------T----------G----------T--G------T-G
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14297247  8 -  14605196 t----------g--------------------t----------g----------t--g------t-g
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           35520  8 +     35617 T----------G--------------------C----------A----------T--A------T-G
i Platanista_gangetica.PlaMin_flattened_line_32310       I 22 I 1
s Pongo_abelii.CM009266.2                                189132348  8 + 189387572 t----------g--------------------t----------g----------t--g------t-g
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9571955  8 +   9816681 T----------G--------------------T----------G----------T--G------T-G
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               74524 14 -     81375 t----------g--------------------t----------gtgtgtg----t--g------t-g
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              6345 14 +     19060 T----------G--------------------T----------G----TGTGTGT--G------T-G
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            11481  9 -     21651 T----------G--------------------T---------TG----------T--C------T-G
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            16275  6 -     21811 T----------G--------------------C----------A----------T--G---------
i Pteronotus_parnellii.KE909381.1                        C 0 I 9
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41666  8 +     42204 T----------A--------------------T----------G----------T--T------C-A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 1
s Pteropus_alecto.KB030862.1                              22977907  8 +  28871421 t----------g--------------------t----------gt---------t--g------c--
i Pteropus_alecto.KB030862.1                             I 2 I 12
s Pteropus_vampyrus.KN534172.1                                7960  8 -      8028 t----------g--------------------t----------gt---------t--g------c--
i Pteropus_vampyrus.KN534172.1                           I 2 I 12
s Puma_concolor.QAVW01001104.1                            20275437  8 -  38429054 T----------A--------------------T----------G----------T--G------T-A
i Puma_concolor.QAVW01001104.1                           C 0 I 1
s Pygathrix_cinerea.k141_1153803                             16335  4 -     91421 ------------------------------------------------------T--G------T-G
i Pygathrix_cinerea.k141_1153803                         I 2 C 0
s Pygathrix_nigripes_b.ctg100                                 7610455  4 +   7812017 ------------------------------------------------------T--G------T-G
i Pygathrix_nigripes_b.ctg100                               I 2 C 0
s Pygathrix_nigripes_a.k141_215492                             16334  4 -     72585 ------------------------------------------------------T--G------T-G
i Pygathrix_nigripes_a.k141_215492                         I 2 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6401  9 +     55207 T----------G--------------------T---------GA----------T--A------T-G
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 21
s Rattus_norvegicus.chr16                                 53571687  9 +  90668790 t----------a--------------------t-t--------g----------T--C------T-G
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        368125  5 -   3329780 --------------------------------t----------g----------t--g------t--
i Rhinolophus_sinicus.LVEH01000134.1                     I 4 I 12
s Rhinopithecus_bieti.k119_217274                             8051  4 -     11128 ------------------------------------------------------t--g------t-g
i Rhinopithecus_bieti.k119_217274                        I 8 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91237392 16 - 195417433 t----------g--------------------t----------gtgtgtgtgtgt--g---------
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7673048 18 +   7961872 t----------g--------------------t----------gtgtgtgtgtgt--g------t-g
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88949 14 -     96226 T----------G--------------TGTATGT----------G---------TT--G------T--
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 2 I 12
s Saguinus_bicolor.k141_8081                                  2433  6 +     42994 T----------G--------------------T----------G----------T--G---------
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                             1132  4 +      2253 T----------G--------------------T----------G-----------------------
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               1561  4 -      8737 T----------G--------------------T----------G-----------------------
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                              1214  4 +      2343 T----------G--------------------T----------G-----------------------
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209476091  6 + 209938924 T----------G--------------------T----------G----------T--G---------
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                 537  4 -      7576 T----------G--------------------T----------G-----------------------
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119952171  8 - 121099817 t----------g--------------------t----------g----------t--a------t-a
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24513  8 +     46362 T----------G--------------------T----------G----------T--A------T-A
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               24608  8 +     45824 T----------G--------------------T----------G----------T--A------T-A
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             41287  8 -     64574 T----------G--------------------T----------G----------T--A------T-A
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4360  8 -     23631 T----------G--------------------T----------G----------T--A------T-A
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 24504  8 -     61129 T----------G--------------------T----------G----------T--A------T-A
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5421848  8 -   5703754 T----------G--------------------T----------G----------T--G------T-A
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          57089  8 -     80660 T----------G--------------------T----------G----------T--G------T-A
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154328  6 -    313613 T----------G--------------------C----------A----------T--A---------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 1
s Semnopithecus_entellus.k141_1672505                         1224 12 -     12572 --------------------------------t----------gtgtgtg----t--g------t-g
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      28074 12 +     39453 --------------------------------t----------gtgtgtg----t--g------t-g
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            8592  4 +     27826 T----------G--------------------T----------G-----------------------
i Semnopithecus_johnii.k141_670120                       C 0 I 2
s Semnopithecus_priam.k141_638794                             8114 14 -     19483 t----------g--------------------t----------gtgtgtg----t--g------t-g
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      1415 14 -     12762 t----------g--------------------t----------gtgtgtg----t--g------t-g
i Semnopithecus_schistaceus.k141_1572284                 C 0 I 4
s Semnopithecus_vetulus.k141_910252                           1276  4 +     13763 T----------G--------------------T----------G-----------------------
i Semnopithecus_vetulus.k141_910252                      C 0 I 4
s Sigmodon_hispidus.SigHis_scaffold_42075                     1380  5 -     30804 -------------------------------------------G----------T--C------T-G
i Sigmodon_hispidus.SigHis_scaffold_42075                I 1 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               4873  8 +   1910179 C----------G--------------------T----------G----------T--G------T-G
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13652118  9 -  18376816 t----------a--------------------t----------a----------t--a------tgt
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1955217  3 -   3870691 ---------------------------------------------------------G------T-G
i Spermophilus_dauricus.KZ294078.1                       I 5 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             32140  8 +     97271 T----------A--------------------T----------G----------T--T------C-A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 1
s Suricata_suricatta.SurSur_flattened_line_6629              19456  8 -    196729 T----------C--------------------T----------G----------T--G------T-G
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 1
s Sus_scrofa.CM000828.4                                    6812225  8 +  69701581 t----------g--------------------c----------a----------t--g------t-g
i Sus_scrofa.CM000828.4                                  C 0 I 23
s Tadarida_brasiliensis.TadBra_scaffold_25820                11940  5 +     41958 T----------G--------------------T----------G----------T------------
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 12
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73733  8 +    116680 T----------G--------------------T----------A----------T--G------T-G
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 I 12
s Theropithecus_gelada.CM009954.1                        186429758  4 + 186847797 t----------g--------------------t----------g-----------------------
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106495 18 +    114563 C----------A--------------------TGTGTCTGTGTG----------T--G------T-A
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   7471  8 +      8208 T----------G--------------------C----------G----------T--G------T-G
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 I 15
s Tonatia_saurophila.TonSau_scaffold_294                     82334  6 +    610378 T----------G--------------------C----------A----------T--G---------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 13
s Trachypithecus_auratus.k141_722599                         12165 14 -     20410 t----------g--------------------t----------gtgtgtg----t--g------t-g
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      1279 14 -     12674 t----------g--------------------t----------gtgtgtg----t--g------t-g
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       12272 14 +     19930 t----------g--------------------t----------gtgtgtg----t--g------t-g
i Trachypithecus_cristatus.k141_580354                   I 6 C 0
s Trachypithecus_francoisi.k141_1412647                       8679  4 -     19997 ------------------------------------------------------T--G------T-G
i Trachypithecus_francoisi.k141_1412647                  I 2 C 0
s Trachypithecus_geei.k141_277701                            48816 12 -     60166 --------------------------------t----------gtgtgtg----t--g------t-g
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        16288  2 -     27529 ----------------------------------------------------------------T-G
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     16236  4 -     18194 ------------------------------------------------------T--G------T-G
i Trachypithecus_hatinhensis.k141_143409                 I 4 C 0
s Trachypithecus_laotum.k141_907409                           9948  4 -     21137 ------------------------------------------------------T--G------T-G
i Trachypithecus_laotum.k141_907409                      I 4 C 0
s Trachypithecus_leucocephalus.k141_587342                    8649  4 -     10723 ------------------------------------------------------T--G------T-G
i Trachypithecus_leucocephalus.k141_587342               I 2 C 0
s Trachypithecus_melamera.k141_434728                         7825  4 +      9834 ------------------------------------------------------t--g------t-g
i Trachypithecus_melamera.k141_434728                    I 6 C 0
s Trachypithecus_obscurus.k141_190785                        26132 20 +     32220 t----------g--------------------tgtgt--gt--gtgtgtg----t--g------t-g
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5940234 14 +   6242583 t----------g--------------------t----------gtgtgtg----t--g------t-g
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        9485 12 +     20839 --------------------------------t----------gtgtgtg----t--g------t-g
i Trachypithecus_pileatus.k141_2007326                   C 0 I 4
s Tragulus_javanicus.TraJav_scaffold_40725                     757  8 +     27266 T----------G--------------------C----------A----------T--G------T-G
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 I 1
s Tupaia_chinensis.KB320699.1                              2156908  4 +   4065304 T----------G--------------------G----------G-----------------------
i Tupaia_chinensis.KB320699.1                            C 0 I 2
s Tupaia_tana.TupTan_flattened_line_97126                    10355  4 -     10553 T----------G--------------------T----------G-----------------------
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 2
s Tursiops_truncatus.MRVK01000835.1                       15739027  6 +  33153633 t----------g--------------------c----------a----------t--a---------
i Tursiops_truncatus.MRVK01000835.1                      I 24 I 3
s Uropsilus_gracilis.UroGra_scaffold_12083                   54424  6 -     77625 T----------G--------------------C----------A----------G--A---------
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 1
s Vicugna_pacos.KN270157.1                                 5372914  3 -   5488506 c----------a--------------------c----------------------------------
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 11926  6 -     43706 t----------a--------------------t----------g----------t--g---------
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 474
s Xerus_inauris.XerIna_scaffold_2302                          2194 28 +    224448 t----------gtgtgtgtgtgtgtgtgtgtgt----------g----------t--g------t-g
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      15974  8 +     63895 T----------G--------------------A----------G----------G--C------T-A
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851544  0 -   5085361 C
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tarsius_wallacei.k141_254427                                1877  3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080  3 +     70052 I
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             2901  7 +     22620 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nannospalax_galili.KL204047.1                            2035627  0 -   3037898 C
e Myotis_myotis.MyoMyo_scaffold_281845                        1115 11 +      1835 I
e Myotis_lucifugus.GL429869.1                              3904963 11 -   4330536 I
e Myotis_davidii.KB100139.1                                1588866 11 -   6019432 I
e Myotis_brandtii.KE162005.1                                281611 11 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     72300  2 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           7969 11 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             35221  4 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1851541  4 +   8254450 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Glis_glis.GliGli_scaffold_19807                            32063  0 +     49224 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  36984  2 +     51376 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Cephalopachus_bancanus.k141_1423433                         6085  3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     94669 29 +    217609 I
e Carlito_syrichta.NW_007259797.1                           156587  3 -    496798 I
e Capromys_pilorides.CapPil_scaffold_65020                    2117  2 -     12242 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       7970 2 +     62944 tg
s Acomys_cahirinus.AcoCah_scaffold_12655                     71881 1 +     87051 T-
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 6
s Allactaga_bullata.AllBul_scaffold_9566                     75584 1 -     89534 T-
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   15891 2 -     52922 tg
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15813 2 -     28001 TG
i Allochrocebus_lhoesti.k141_4309873                     I 4 C 0
s Allochrocebus_preussi.k141_1442296                          6313 2 -     18505 TG
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           7165 2 -     12518 TG
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              8732 1 +     51355 T-
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                1841 1 -     36483 T-
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              12293 1 +     28687 T-
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                  806 1 +     27940 T-
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            1850 1 -      9457 T-
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                              806 1 +     30492 T-
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              4801 1 +     47717 T-
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              1533 1 +      5663 T-
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             15985 1 +     50774 T-
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  16976 1 -     33861 T-
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            16973 1 -     34016 T-
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299400 1 -   5030052 t-
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             17009 1 -     34685 T-
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               30134 1 -     47192 T-
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13747 1 +     20879 T-
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 6
s Arctocebus_calabarensis.k141_1648548                         512 1 +      5281 C-
i Arctocebus_calabarensis.k141_1648548                   C 0 C 0
s Callibella_humilis.k141_10318                                757 1 +     27907 T-
i Callibella_humilis.k141_10318                          C 0 C 0
s Callimico_goeldii.k141_737284                                395 1 -     31217 T-
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                              691 1 +      5377 T-
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592552 1 - 189096842 T-
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1366 1 -     12329 T-
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138426 1 +    179628 T-
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 6
s Cebuella_niveiventris.k141_280505                          14467 1 +     15466 T-
i Cebuella_niveiventris.k141_280505                      C 0 C 0
s Cebuella_pygmaea.k141_793006                                 394 1 -     15088 T-
i Cebuella_pygmaea.k141_793006                           C 0 C 0
s Cebus_albifrons.Contig27                                25653902 1 +  26074798 C-
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                1840 1 +     28840 C-
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 1569 1 +     14051 C-
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Cercocebus_atys.KQ010504.1                               4476828 2 +   4669795 tg
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        1330 2 +     17872 TG
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           1919 2 -     14043 TG
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          10020 2 +     27781 TG
i Cercocebus_torquatus.k141_3057011                      C 0 I 2
s Cercopithecus_ascanius.k141_1024104                        10182 2 -     20310 TG
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          13162 2 +     29689 TG
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7912 2 -     20078 TG
i Cercopithecus_diana.k141_1150327                       I 2 C 0
s Cercopithecus_hamlyni.k141_187466                          15834 2 -     27936 TG
i Cercopithecus_hamlyni.k141_187466                      I 2 C 0
s Cercopithecus_lowei.k141_1854285                            4700 2 -     17152 TG
i Cercopithecus_lowei.k141_1854285                       I 2 C 0
s Cercopithecus_albogularis.ctg5                                38818241 2 +  39242232 TG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223934 2 -  21565898 TG
i Cercopithecus_mona.ctg39                               I 2 C 0
s Cercopithecus_neglectus.k141_2526306                       41053 2 -     53127 TG
i Cercopithecus_neglectus.k141_2526306                   I 2 C 0
s Cercopithecus_nictitans.k141_1119862                        1300 2 +     13442 TG
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15853 2 -     27947 TG
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         15829 2 +     17596 TG
i Cercopithecus_pogonias.k141_822820                     I 2 C 0
s Cercopithecus_roloway.k141_2581234                          1872 2 +     14005 TG
i Cercopithecus_roloway.k141_2581234                     I 2 I 8
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1598 1 -      8501 C-
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       I 6 I 1
s Chinchilla_lanigera.JH722012.1                           1254014 1 +   2543920 T-
i Chinchilla_lanigera.JH722012.1                         C 0 I 2
s Chiropotes_albinasus.k141_2206961                           2174 1 -     15524 T-
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18429819 2 -  18827391 TG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       16253 2 -     50209 TG
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135423254 2 + 135778131 tg
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1911738 2 +   2368649 tg
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949984 2 + 200372422 TG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              38266 2 +     84244 TG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 51159 1 +     63868 T-
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 6
s Cricetulus_griseus.LT883664.1                           11668604 1 + 224834208 t-
i Cricetulus_griseus.LT883664.1                          C 0 I 6
s Ctenodactylus_gundi.CteGun_scaffold_65                    838203 1 +   1526836 T-
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 6
s Dasypus_novemcinctus.JH564415.1                            64621 1 +   2246927 T-
i Dasypus_novemcinctus.JH564415.1                        I 12 I 1
s Dinomys_branickii.DinBra_scaffold_21862                    37487 1 +     67921 T-
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 2
s Ellobius_lutescens.LOEQ01008920.1                          21616 1 -    110024 t-
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 6
s Ellobius_talpinus.LOJH01081419.1                            1522 1 +      8657 t-
i Ellobius_talpinus.LOJH01081419.1                       C 0 I 6
s Erythrocebus_patas.Contig38                             21206419 2 -  21539334 TG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Fukomys_damarensis.KN121974.1                             851537 1 +   3816255 t-
i Fukomys_damarensis.KN121974.1                          C 0 I 2
s Galago_moholi.ctg2040                                     429684 1 -    453645 C-
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             7374 1 +     11339 C-
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            4663 1 +     41679 C-
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               2323 1 -      9135 T-
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 I 251
s Gorilla_beringei.k141_3596273                              17225 2 -     32273 TG
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186339362 2 + 186649187 tg
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33743 1 +     78134 T-
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 11
s Heterocephalus_glaber.JH602082.1                        20663308 1 +  22651954 c-
i Heterocephalus_glaber.JH602082.1                       C 0 I 2
s Hoolock_leuconedys.ctg274                                    436034 2 +    630532 tg
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84189 1 +    135385 T-
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 6
s Ictidomys_tridecemlineatus.JH393364.1                    7522074 1 -   7955117 A-
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 6
s Jaculus_jaculus.JH725527.1                               8278246 1 -   9596543 T-
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        9127 1 +     64341 T-
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           1469 1 -     35062 T-
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        9156 1 +     35603 T-
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    30775 1 +     38576 T-
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         27479 1 +     66356 T-
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     7883 1 -     14121 T-
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 6
s Lophocebus_aterrimus.ctg367                              1438379 2 +   1826925 TG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_399337                            17708 1 -     33856 C-
i Loris_lydekkerianus.k141_399337                        C 0 C 0
s Loris_tardigradus.ctg83                                  1015419 1 +   6120653 C-
i Loris_tardigradus.ctg83                                C 0 C 0
s Macaca_arctoides.k141_2326796                               8190 2 +     40492 TG
i Macaca_arctoides.k141_2326796                          I 4 C 0
s Macaca_assamensis.Contig5                               59677455 2 +  60120075 tg
i Macaca_assamensis.Contig5                              I 10 C 0
s Macaca_cyclopis.k119_18836                                 13967 2 -     26193 tg
i Macaca_cyclopis.k119_18836                             I 6 C 0
s Macaca_fascicularis.k141_814140                            81745 2 -    114318 TG
i Macaca_fascicularis.k141_814140                        I 8 C 0
s Macaca_fuscata.k119_255327                                  7438 1 -     23192 T-
i Macaca_fuscata.k119_255327                             I 6 C 0
s Macaca_leonina.k141_3550399                                16904 2 -     29190 tg
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  25478 2 +     37952 tg
i Macaca_maura.k141_2733130                              I 6 C 0
s Macaca_mulatta.NC_041758.1                             186840565 1 + 187317192 t-
i Macaca_mulatta.NC_041758.1                             I 6 C 0
s Macaca_nemestrina.KQ007038.1                            25459133 2 -  25927173 tg
i Macaca_nemestrina.KQ007038.1                           I 6 C 0
s Macaca_nigra.k141_1655396                                  81334 2 +     89720 tg
i Macaca_nigra.k141_1655396                              I 6 C 0
s Macaca_radiata.k141_3680011                                 8327 2 +     20474 TG
i Macaca_radiata.k141_3680011                            I 8 C 0
s Macaca_siberu.k141_635500                                   8124 2 -     14993 tg
i Macaca_siberu.k141_635500                              I 6 C 0
s Macaca_silenus.Contig273                                  330990 2 -    668171 tg
i Macaca_silenus.Contig273                               I 6 C 0
s Macaca_thibetana.k99_256239                                 6440 2 -     24072 TG
i Macaca_thibetana.k99_256239                            I 8 C 0
s Macaca_tonkeana.k141_1498238                               27067 2 -     45290 tg
i Macaca_tonkeana.k141_1498238                           I 6 C 0
s Mandrillus_leucophaeus.scaffold280                      23938650 2 -  24302211 TG
i Mandrillus_leucophaeus.scaffold280                     I 2 C 0
s Mandrillus_sphinx.Contig270                               352770 2 +    752769 TG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33104361 1 -  40650429 A-
i Marmota_marmota.CZRN01000018.1                         C 0 I 6
s Meriones_unguiculatus.MerUng_scaffold_7390                 33844 1 +    140813 C-
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 6
s Mesocricetus_auratus.KB708134.1                         12183300 1 -  29670104 T-
i Mesocricetus_auratus.KB708134.1                        C 0 I 6
s Mico_argentatus.k141_1024458                                 394 1 -     20047 T-
i Mico_argentatus.k141_1024458                           C 0 C 0
s Mico_humeralifer.k141_1346949                                807 1 +      1399 T-
i Mico_humeralifer.k141_1346949                          C 0 C 0
s Mico_schneideri.k141_916733                                        394 1 +      5107 T-
i Mico_schneideri.k141_916733                                  C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11261599 1 -  27267610 G-
i Microtus_ochrogaster.CM001695.1                        C 0 I 6
s Miopithecus_ogouensis.k141_534055                          10332 2 -     28506 TG
i Miopithecus_ogouensis.k141_534055                      I 2 C 0
s Mus_caroli.LT608237.1                                   84362462 1 - 120012414 T-
i Mus_caroli.LT608237.1                                  C 0 I 6
s Mus_musculus.chr8                                       87651447 1 - 129401213 T-
i Mus_musculus.chr8                                      C 0 I 6
s Mus_pahari.LT608297.1                                   31356105 1 -  89631738 t-
i Mus_pahari.LT608297.1                                  C 0 I 6
s Mus_spretus.CM004101.1                                  90753508 1 - 130317789 T-
i Mus_spretus.CM004101.1                                 C 0 I 6
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190386 1 +    196477 T-
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 12 I 1
s Nasalis_larvatus.k141_413338                               16353 2 +     21681 TG
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Nycticebus_bengalensis.LG01                            102595921 1 - 196305487 C-
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1514628                             1388 1 -      5837 C-
i Nycticebus_coucang.k141_1514628                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771843 1 + 199412804 C-
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1365328 1 +   3988456 T-
i Ochotona_princeps.JH802162.1                           C 0 I 6
s Ondatra_zibethicus.OndZib_scaffold_46174                   26250 1 +     28053 T-
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 6
s Onychomys_torridus.OnyTor_scaffold_2986                    81288 1 +    102263 T-
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 6
s Oryctolagus_cuniculus.CM000791.1                        67148784 1 + 174332312 t-
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 6
s Otolemur_crassicaudatus.k141_222918                         7176 1 +      8798 C-
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             699415 1 -   1103335 c-
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    45313 2 +     80009 tg
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03002948.1                             21265 2 +     28717 tg
i Pan_troglodytes.NBAG03002948.1                         I 2185 I 2045
s Papio_anubis.CM001495.2                                183444452 2 + 183742232 tg
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             8102 2 +     20448 TG
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20564910 2 +  20919399 TG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6842 2 +     41871 TG
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    10135 2 +     27711 TG
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  1132 2 -     11374 TG
i Papio_ursinus.k141_5274964                             C 0 C 0
s Perodicticus_ibeanus.k141_1182643                            193 1 -      3244 C-
i Perodicticus_ibeanus.k141_1182643                      C 0 C 0
s Perodicticus_potto.k141_1186926                              571 1 +     10374 C-
i Perodicticus_potto.k141_1186926                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18195864 1 -  18517816 T-
i Peromyscus_maniculatus.KI615324.1                      C 0 I 6
s Petromus_typicus.PetTyp_scaffold_42190                     29221 1 -     29689 T-
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 I 2
s Piliocolobus_badius.k141_1234363                           44849 2 +     62158 TG
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        39598 2 +     89929 tg
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            41012 2 +     51399 TG
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14297255 2 -  14605196 tg
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                189132356 2 + 189387572 tg
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9571963 2 +   9816681 TG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               74538 2 -     81375 tg
i Presbytis_comata.k141_677006                           C 0 C 0
s Psammomys_obesus.NESX01036370.1                            11490 1 -     21651 C-
i Psammomys_obesus.NESX01036370.1                        C 0 I 6
s Pygathrix_cinerea.k141_1153803                             16339 2 -     91421 TG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7610459 2 +   7812017 TG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             16338 2 -     72585 TG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 53571696 1 +  90668790 T-
i Rattus_norvegicus.chr16                                C 0 I 6
s Rhinopithecus_bieti.k119_217274                             8055 2 -     11128 tg
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7673066 2 +   7961872 tg
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_8081                                  2439 1 +     42994 T-
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                             1136 1 +      2253 T-
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               1565 1 -      8737 T-
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                              1218 1 +      2343 T-
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209476097 1 + 209938924 T-
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                 541 1 -      7576 T-
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119952179 1 - 121099817 c-
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24521 1 +     46362 T-
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               24616 1 +     45824 T-
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             41295 1 -     64574 C-
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4368 1 -     23631 C-
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 24512 1 -     61129 T-
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5421856 1 -   5703754 C-
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          57097 1 -     80660 C-
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Semnopithecus_entellus.k141_1672505                         1236 2 -     12572 tg
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      28086 2 +     39453 tg
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_priam.k141_638794                             8128 2 -     19483 tg
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      1433 2 -     12762 tg
i Semnopithecus_schistaceus.k141_1572284                 I 4 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     1385 1 -     30804 T-
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 I 6
s Solenodon_paradoxus.SolPar_flattened_line_126               4881 1 +   1910179 T-
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 1
s Spermophilus_dauricus.KZ294078.1                         1955220 1 -   3870691 A-
i Spermophilus_dauricus.KZ294078.1                       C 0 I 6
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73753 1 +    116680 T-
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 12 I 1
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106513 1 +    114563 T-
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 2
s Tolypeutes_matacus.TolMat_scaffold_228639                   7494 1 +      8208 T-
i Tolypeutes_matacus.TolMat_scaffold_228639              I 15 I 1
s Trachypithecus_auratus.k141_722599                         12179 2 -     20410 tg
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      1293 2 -     12674 tg
i Trachypithecus_crepusculus.k141_582567                 C 0 I 2
s Trachypithecus_cristatus.k141_580354                       12286 2 +     19930 tg
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       8683 2 -     19997 TG
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48828 2 -     60166 tg
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        16290 2 -     27529 TG
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     16240 2 -     18194 TG
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9952 2 -     21137 TG
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    8653 2 -     10723 TG
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7829 2 +      9834 tg
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        26152 2 +     32220 tg
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5940248 2 +   6242583 tg
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        9501 2 +     20839 tg
i Trachypithecus_pileatus.k141_2007326                   I 4 C 0
s Tupaia_chinensis.KB320699.1                              2156914 1 +   4065304 A-
i Tupaia_chinensis.KB320699.1                            I 2 I 7
s Tupaia_tana.TupTan_flattened_line_97126                    10361 1 -     10553 A-
i Tupaia_tana.TupTan_flattened_line_97126                I 2 I 7
s Xerus_inauris.XerIna_scaffold_2302                          2222 1 +    224448 t-
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 6
s Zapus_hudsonius.ZapHud_scaffold_11398                      15982 1 +     63895 T-
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 11932 474 -     43706 I
e Vicugna_pacos.KN270157.1                                 5372917 0 -   5488506 C
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851544 0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   54430 1 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15739033 3 +  33153633 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_40725                     765 1 +     27266 I
e Tonatia_saurophila.TonSau_scaffold_294                     82340 13 +    610378 I
e Theropithecus_gelada.CM009954.1                        186429762 0 + 186847797 C
e Tarsius_wallacei.k141_254427                                1877 3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080 3 +     70052 I
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                11945 12 +     41958 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6812233 23 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629              19464 1 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             32148 1 +     97271 I
e Sorex_araneus.JH798187.1                                13652127 0 -  18376816 C
e Semnopithecus_vetulus.k141_910252                           1280 4 +     13763 I
e Semnopithecus_johnii.k141_670120                            8596 2 +     27826 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    154334 1 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                88963 12 -     96226 I
e Rhinopithecus_roxellana.NC_044550.1                     91237408 0 - 195417433 C
e Rhinolophus_sinicus.LVEH01000134.1                        368130 12 -   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  6410 21 +     55207 I
e Puma_concolor.QAVW01001104.1                            20275445 1 -  38429054 I
e Pteropus_vampyrus.KN534172.1                                7968 12 -      8028 I
e Pteropus_alecto.KB030862.1                              22977915 12 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         41674 1 +     42204 I
e Pteronotus_parnellii.KE909381.1                            16281 9 -     21811 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Presbytis_mitrata.k141_1087752                              6359 0 +     19060 C
e Platanista_gangetica.PlaMin_flattened_line_32310           35528 1 +     35617 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             2901 7 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9835 1 +     63832 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13779 1 -     78924 I
e Pantholops_hodgsonii.KE114653.1                          1265831 21 -   2937107 I
e Panthera_tigris.KE722367.1                               4722373 1 -   8748460 I
e Panthera_pardus.KV860321.1                                265493 1 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  152284 1 +    230217 I
e Ovis_canadensis.OviCan_scaffold_2572                      174913 21 -    191736 I
e Ovis_aries.CM001607.2                                   17586936 21 +  44047080 I
e Otocyon_megalotis.JAEUCK010005147.1                       463484 482 -    559221 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Orcinus_orca.KB316932.1                                  2782790 1 -  10937097 I
e Okapia_johnstoni.LVCL01S0005463.1                          77668 21 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              507816 1 -   2017862 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nyctereutes_procyonoides.CAJHUB010000658.1               9150535 341 -   9404916 I
e Noctilio_leporinus.NocLep_scaffold_251                    758990 17 +    783361 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866881 1 +   7148211 I
e Neomonachus_schauinslandi.NINY01007730.1                20308671 1 +  31847680 I
e Nannospalax_galili.KL204047.1                            2035627 0 -   3037898 C
e Myotis_myotis.MyoMyo_scaffold_281845                        1115 11 +      1835 I
e Myotis_lucifugus.GL429869.1                              3904963 11 -   4330536 I
e Myotis_davidii.KB100139.1                                1588866 11 -   6019432 I
e Myotis_brandtii.KE162005.1                                281611 11 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     72300 2 -     80779 I
e Mustela_putorius.JH418006.1                               302867 1 -  14710649 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           7969 11 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398 7 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1836 21 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 142786 15 -    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27912 1 -    437263 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7078 1 -      8324 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             35221 4 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1851541 4 +   8254450 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                16995 13 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    4402 1 +     10310 I
e Mellivora_capensis.MelCap_flattened_line_69365             11474 1 +     13704 I
e Megaderma_lyra.MegLyr_scaffold_4542                        14475 12 -    207569 I
e Manis_pentadactyla.KN006162.1                              51381 1 -    317179 I
e Manis_javanica.JSZB01003497.1                              19395 1 +    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_8222                 91773 12 +     94391 I
e Lycaon_pictus.CM007581.1                                17956469 472 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268797 1 -    662738 I
e Leptonychotes_weddellii.KB714746.1                       3044211 1 +   3914936 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Lasiurus_borealis.LasBor_scaffold_32767                    17527 78 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                3107 1 -      3359 I
e Inia_geoffrensis.IniGeo_flattened_line_48101               23736 1 +     23964 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  46155 1 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_101188                214 12 +      9903 I
e Hipposideros_armiger.JXIK01000431.1                       111644 12 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18961 21 +     36099 I
e Helogale_parvula.HelPar_flattened_line_2585               243459 1 +    327341 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Glis_glis.GliGli_scaffold_19807                            32063 0 +     49224 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609755 21 -    660261 I
e Felis_nigripes.FelNig_flattened_line_20823                 10676 1 -     36744 I
e Felis_catus_fca126.CM031415.1                           20196922 1 + 205367284 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Eubalaena_japonica.EubJap_flattened_line_31514             26146 1 -     44125 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           12193 1 +    133382 I
e Erinaceus_europaeus.JH835339.1                           3329343 1 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2146873 12 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16330760 1 -  41312741 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311790 21 +    607251 I
e Eidolon_helvum.KE759718.1                                  11681 12 +     11740 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8631244 13 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812529 1 +  35494412 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  36984 2 +     51376 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             29614 1 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_37019               4057 0 -     19598 C
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           1614 12 +     23735 I
e Condylura_cristata.JH655891.1                           17549176 1 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Cephalopachus_bancanus.k141_1423433                         6085 3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     94669 29 +    217609 I
e Carollia_perspicillata.CarPer_scaffold_92756                6247 4 -     11696 I
e Carlito_syrichta.NW_007259797.1                           156587 3 -    496798 I
e Capromys_pilorides.CapPil_scaffold_65020                    2117 2 -     12242 I
e Capra_hircus.CM004588.1                                 18061476 21 -  44709034 I
e Capra_aegagrus.CM003241.1                               18830756 21 +  46296322 I
e Canis_lupus_orion.HG994398.1                            18501526 477 +  63665305 I
e Canis_lupus_familiaris.chr16                            17960229 472 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9035753 477 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     1058 472 -     43241 I
e CanFam4.chr16                                           17800310 477 -  60362399 I
e Camelus_ferus.KB017975.1                                  404170 0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2335871 0 -   7040546 C
e Camelus_bactrianus.KN276810.1                           10003395 0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2820128 21 +   4408762 I
e Bos_taurus.CM000184.6                                   18200496 21 - 114055384 I
e Bos_mutus.JH880303.1                                     1126378 21 -   1948126 I
e Bos_indicus.CM003028.1                                  18363522 21 - 116941312 I
e Bison_bison.KN261452.1                                    200637 21 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    27560 21 +     34529 I
e Balaenoptera_bonaerensis.DF707048.1                         3346 1 -     18090 I
e Balaenoptera_acutorostrata.KI537508.1                   15192881 1 +  23207421 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  5878 13 +     43469 I
e Antilocapra_americana.AntAmePen_scaffold_12469             99127 21 -    100397 I
e Anoura_caudifer.AnoCau_scaffold_1412                      186495 13 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676638 21 -   2318259 I
e Ailurus_fulgens.LNAC01001112.1                             80803 1 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9511730 1 -  29979442 I
e Acinonyx_jubatus.LLWD01001279.1                           828437 1 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       7972 3 +     62944 tg--t
s Cercocebus_atys.KQ010504.1                               4476830 1 +   4669795 ----t
i Cercocebus_atys.KQ010504.1                             C 0 I 4
s Cercocebus_chrysogaster.k141_1540778                        1332 1 +     17872 ----T
i Cercocebus_chrysogaster.k141_1540778                   C 0 I 4
s Cercocebus_lunulatus.k141_3342297                           1921 1 -     14043 ----T
i Cercocebus_lunulatus.k141_3342297                      C 0 I 4
s Allenopithecus_nigroviridis.k141_3361533                   15893 2 -     52922 tg---
i Allenopithecus_nigroviridis.k141_3361533               C 0 I 9
s Allochrocebus_lhoesti.k141_4309873                         15815 2 -     28001 TG---
i Allochrocebus_lhoesti.k141_4309873                     C 0 I 1
s Allochrocebus_preussi.k141_1442296                          6315 2 -     18505 TG---
i Allochrocebus_preussi.k141_1442296                     C 0 I 1
s Allochrocebus_solatus.k141_166128                           7167 2 -     12518 TG---
i Allochrocebus_solatus.k141_166128                      C 0 I 1
s Cercocebus_torquatus.k141_3057011                          10024 3 +     27781 TG--T
i Cercocebus_torquatus.k141_3057011                      I 2 I 4
s Cercopithecus_ascanius.k141_1024104                        10184 2 -     20310 TG---
i Cercopithecus_ascanius.k141_1024104                    C 0 I 1
s Cercopithecus_cephus.k141_1078548                          13164 2 +     29689 TG---
i Cercopithecus_cephus.k141_1078548                      C 0 I 1
s Cercopithecus_diana.k141_1150327                            7914 2 -     20078 TG---
i Cercopithecus_diana.k141_1150327                       C 0 I 1
s Cercopithecus_hamlyni.k141_187466                          15836 2 -     27936 TG---
i Cercopithecus_hamlyni.k141_187466                      C 0 I 1
s Cercopithecus_lowei.k141_1854285                            4702 2 -     17152 TG---
i Cercopithecus_lowei.k141_1854285                       C 0 I 1
s Cercopithecus_albogularis.ctg5                                38818243 2 +  39242232 TG---
i Cercopithecus_albogularis.ctg5                               C 0 I 1
s Cercopithecus_mona.ctg39                                21223936 2 -  21565898 TG---
i Cercopithecus_mona.ctg39                               C 0 I 1
s Cercopithecus_neglectus.k141_2526306                       41055 2 -     53127 TG---
i Cercopithecus_neglectus.k141_2526306                   C 0 I 1
s Cercopithecus_nictitans.k141_1119862                        1302 2 +     13442 TG---
i Cercopithecus_nictitans.k141_1119862                   C 0 I 1
s Cercopithecus_petaurista.k141_807961                       15855 2 -     27947 TG---
i Cercopithecus_petaurista.k141_807961                   C 0 I 1
s Cercopithecus_pogonias.k141_822820                         15831 2 +     17596 TG---
i Cercopithecus_pogonias.k141_822820                     C 0 I 1
s Cercopithecus_roloway.k141_2581234                          1882 2 +     14005 TG---
i Cercopithecus_roloway.k141_2581234                     I 8 I 1
s Chlorocebus_aethiops.ctg25                              18429821 2 -  18827391 TG---
i Chlorocebus_aethiops.ctg25                             C 0 I 1
s Chlorocebus_pygerythrus.k141_1025673                       16255 2 -     50209 TG---
i Chlorocebus_pygerythrus.k141_1025673                   C 0 I 1
s Chlorocebus_sabaeus.CM001947.1                         135423256 2 + 135778131 tg---
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 1
s Colobus_angolensis.KN981557.1                            1911740 3 +   2368649 tg--t
i Colobus_angolensis.KN981557.1                          C 0 I 2
s Colobus_guereza.LG01                                   199949986 5 + 200372422 TGCGT
i Colobus_guereza.LG01                                   C 0 I 2
s Colobus_polykomos.k141_906115                              38268 3 +     84244 TG--T
i Colobus_polykomos.k141_906115                          C 0 I 2
s Erythrocebus_patas.Contig38                             21206421 2 -  21539334 TG---
i Erythrocebus_patas.Contig38                            C 0 I 1
s Gorilla_beringei.k141_3596273                              17227 3 -     32273 TG--T
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186339364 3 + 186649187 tg--t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hoolock_leuconedys.ctg274                                    436036 3 +    630532 tg--t
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Lophocebus_aterrimus.ctg367                              1438381 3 +   1826925 TG--T
i Lophocebus_aterrimus.ctg367                            C 0 I 4
s Macaca_arctoides.k141_2326796                               8192 3 +     40492 TG--T
i Macaca_arctoides.k141_2326796                          C 0 I 4
s Macaca_assamensis.Contig5                               59677457 3 +  60120075 tg--t
i Macaca_assamensis.Contig5                              C 0 I 2
s Macaca_cyclopis.k119_18836                                 13969 3 -     26193 tg--t
i Macaca_cyclopis.k119_18836                             C 0 I 4
s Macaca_fascicularis.k141_814140                            81747 3 -    114318 TG--T
i Macaca_fascicularis.k141_814140                        C 0 I 4
s Macaca_fuscata.k119_255327                                  7439 2 -     23192 -G--T
i Macaca_fuscata.k119_255327                             C 0 I 4
s Macaca_leonina.k141_3550399                                16906 2 -     29190 tg---
i Macaca_leonina.k141_3550399                            C 0 I 1
s Macaca_maura.k141_2733130                                  25480 3 +     37952 tg--t
i Macaca_maura.k141_2733130                              C 0 I 4
s Macaca_nemestrina.KQ007038.1                            25459135 3 -  25927173 tg--t
i Macaca_nemestrina.KQ007038.1                           C 0 I 4
s Macaca_nigra.k141_1655396                                  81336 3 +     89720 tg--t
i Macaca_nigra.k141_1655396                              C 0 I 4
s Macaca_radiata.k141_3680011                                 8329 3 +     20474 TG--T
i Macaca_radiata.k141_3680011                            C 0 I 4
s Macaca_siberu.k141_635500                                   8126 3 -     14993 tg--t
i Macaca_siberu.k141_635500                              C 0 I 4
s Macaca_silenus.Contig273                                  330992 2 -    668171 tg---
i Macaca_silenus.Contig273                               C 0 I 1
s Macaca_thibetana.k99_256239                                 6442 3 -     24072 TG--T
i Macaca_thibetana.k99_256239                            C 0 I 2
s Macaca_tonkeana.k141_1498238                               27069 3 -     45290 tg--t
i Macaca_tonkeana.k141_1498238                           C 0 I 4
s Mandrillus_leucophaeus.scaffold280                      23938652 3 -  24302211 TG--T
i Mandrillus_leucophaeus.scaffold280                     C 0 I 4
s Mandrillus_sphinx.Contig270                               352772 3 +    752769 TG--T
i Mandrillus_sphinx.Contig270                            C 0 I 4
s Miopithecus_ogouensis.k141_534055                          10334 2 -     28506 TG---
i Miopithecus_ogouensis.k141_534055                      C 0 I 1
s Nasalis_larvatus.k141_413338                               16355 3 +     21681 TG--T
i Nasalis_larvatus.k141_413338                           C 0 I 4
s Pan_paniscus.KQ411613.1                                    45315 3 +     80009 tg--t
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.KZ622849.1                                 23503 2 +    110857 -g--t
i Pan_troglodytes.KZ622849.1                             I 325 C 0
s Papio_anubis.CM001495.2                                183444454 3 + 183742232 tg--t
i Papio_anubis.CM001495.2                                C 0 I 4
s Papio_cynocephalus.k141_4307930                             8104 3 +     20448 TG--T
i Papio_cynocephalus.k141_4307930                        C 0 I 4
s Papio_hamadryas.Contig39                                20564912 3 +  20919399 TG--T
i Papio_hamadryas.Contig39                               C 0 I 4
s Papio_kindae.k141_1936966                                   6844 3 +     41871 TG--T
i Papio_kindae.k141_1936966                              C 0 I 4
s Papio_papio.k141_802527                                    10137 3 +     27711 TG--T
i Papio_papio.k141_802527                                C 0 I 4
s Papio_ursinus.k141_5274964                                  1134 3 -     11374 TG--T
i Papio_ursinus.k141_5274964                             C 0 I 4
s Piliocolobus_badius.k141_1234363                           44851 3 +     62158 TG--T
i Piliocolobus_badius.k141_1234363                       C 0 I 4
s Piliocolobus_gordonorum.k141_381342                        39600 3 +     89929 tg--t
i Piliocolobus_gordonorum.k141_381342                    C 0 I 4
s Piliocolobus_kirkii.k141_448987                            41014 3 +     51399 TG--T
i Piliocolobus_kirkii.k141_448987                        C 0 I 4
s Piliocolobus_tephrosceles.PDMG02000141.1                14297257 3 -  14605196 tg--t
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 4
s Pongo_abelii.CM009266.2                                189132358 3 + 189387572 tg--c
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9571965 3 +   9816681 TG--C
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               74540 3 -     81375 tg--t
i Presbytis_comata.k141_677006                           C 0 I 4
s Presbytis_mitrata.k141_1087752                              6359 1 +     19060 ----T
i Presbytis_mitrata.k141_1087752                         C 0 I 4
s Pygathrix_cinerea.k141_1153803                             16341 3 -     91421 TG--T
i Pygathrix_cinerea.k141_1153803                         C 0 I 4
s Pygathrix_nigripes_b.ctg100                                 7610461 3 +   7812017 TG--T
i Pygathrix_nigripes_b.ctg100                               C 0 I 4
s Pygathrix_nigripes_a.k141_215492                             16340 3 -     72585 TG--T
i Pygathrix_nigripes_a.k141_215492                         C 0 I 4
s Rhinopithecus_bieti.k119_217274                             8057 3 -     11128 tg--t
i Rhinopithecus_bieti.k119_217274                        C 0 I 4
s Rhinopithecus_roxellana.NC_044550.1                     91237408 1 - 195417433 ----t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 4
s Rhinopithecus_strykeri.ctg102                            7673068 3 +   7961872 tg--t
i Rhinopithecus_strykeri.ctg102                          C 0 I 4
s Semnopithecus_entellus.k141_1672505                         1238 1 -     12572 ----t
i Semnopithecus_entellus.k141_1672505                    C 0 I 4
s Semnopithecus_hypoleucos.k141_1615806                      28088 3 +     39453 tg--t
i Semnopithecus_hypoleucos.k141_1615806                  C 0 I 4
s Semnopithecus_johnii.k141_670120                            8598 1 +     27826 ----T
i Semnopithecus_johnii.k141_670120                       I 2 I 4
s Semnopithecus_priam.k141_638794                             8130 3 -     19483 tg--t
i Semnopithecus_priam.k141_638794                        C 0 I 4
s Semnopithecus_schistaceus.k141_1572284                      1435 3 -     12762 tg--t
i Semnopithecus_schistaceus.k141_1572284                 C 0 I 4
s Semnopithecus_vetulus.k141_910252                           1284 1 +     13763 ----T
i Semnopithecus_vetulus.k141_910252                      I 4 I 4
s Theropithecus_gelada.CM009954.1                        186429762 1 + 186847797 ----t
i Theropithecus_gelada.CM009954.1                        C 0 I 4
s Trachypithecus_auratus.k141_722599                         12181 3 -     20410 tg--t
i Trachypithecus_auratus.k141_722599                     C 0 I 4
s Trachypithecus_crepusculus.k141_582567                      1297 3 -     12674 tg--t
i Trachypithecus_crepusculus.k141_582567                 I 2 I 4
s Trachypithecus_cristatus.k141_580354                       12288 3 +     19930 tg--t
i Trachypithecus_cristatus.k141_580354                   C 0 I 4
s Trachypithecus_francoisi.k141_1412647                       8685 3 -     19997 TG--T
i Trachypithecus_francoisi.k141_1412647                  C 0 I 4
s Trachypithecus_geei.k141_277701                            48830 3 -     60166 tg--t
i Trachypithecus_geei.k141_277701                        C 0 I 4
s Trachypithecus_germaini.k141_912491                        16292 3 -     27529 TG--T
i Trachypithecus_germaini.k141_912491                    C 0 I 4
s Trachypithecus_hatinhensis.k141_143409                     16242 3 -     18194 TG--T
i Trachypithecus_hatinhensis.k141_143409                 C 0 I 4
s Trachypithecus_laotum.k141_907409                           9954 3 -     21137 TG--T
i Trachypithecus_laotum.k141_907409                      C 0 I 4
s Trachypithecus_leucocephalus.k141_587342                    8655 3 -     10723 TG--T
i Trachypithecus_leucocephalus.k141_587342               C 0 I 4
s Trachypithecus_melamera.k141_434728                         7831 3 +      9834 tg--t
i Trachypithecus_melamera.k141_434728                    C 0 I 4
s Trachypithecus_obscurus.k141_190785                        26154 3 +     32220 tg--t
i Trachypithecus_obscurus.k141_190785                    C 0 I 4
s Trachypithecus_phayrei.ctg124                            5940250 3 +   6242583 tg--t
i Trachypithecus_phayrei.ctg124                          C 0 I 4
s Trachypithecus_pileatus.k141_2007326                        9503 3 +     20839 tg--t
i Trachypithecus_pileatus.k141_2007326                   C 0 I 4
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699416 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7177 0 +      8798 C
e Galago_senegalensis.k141_631886                             7375 0 +     11339 C
e Galago_moholi.ctg2040                                     429685 0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57098 0 -     80660 C
e Sapajus_apella.ctg103                                    5421857 0 -   5703754 C
e Saimiri_ustus.k141_1484609                                 24513 0 -     61129 C
e Saimiri_sciureus.k141_2278166                               4369 0 -     23631 C
e Saimiri_oerstedii.k141_1487881                             41296 0 -     64574 C
e Saimiri_macrodon.k141_716185                               24617 0 +     45824 C
e Saimiri_cassiquiarensis.k141_2188234                       24522 0 +     46362 C
e Saimiri_boliviensis.NW_024100920.1                     119952180 0 - 121099817 C
e Saguinus_mystax.k141_4699220                                 542 0 -      7576 C
e Saguinus_midas.LG03                                    209476098 0 + 209938924 C
e Saguinus_labiatus.k141_4004060                              1219 0 +      2343 C
e Saguinus_inustus.k141_3945547                               1566 0 -      8737 C
e Saguinus_imperator.k141_1496743                             1137 0 +      2253 C
e Saguinus_bicolor.k141_8081                                  2440 0 +     42994 C
e Mico_schneideri.k141_916733                                        395 0 +      5107 C
e Mico_humeralifer.k141_1346949                                808 0 +      1399 C
e Mico_argentatus.k141_1024458                                 395 0 -     20047 C
e Leontopithecus_rosalia.k141_464620                         27480 0 +     66356 C
e Leontopithecus_chrysomelas.k141_1519602                    30776 0 +     38576 C
e Leontocebus_nigricollis.k141_4610752                        9157 0 +     35603 C
e Leontocebus_illigeri.k141_1304848                           1470 0 -     35062 C
e Leontocebus_fuscicollis.k141_1820339                        9128 0 +     64341 C
e Chiropotes_albinasus.k141_2206961                           2175 0 -     15524 C
e Cebus_unicolor.k141_1837183                                 1570 0 +     14051 C
e Cebus_olivaceus.k141_1764483                                1841 0 +     28840 C
e Cebus_albifrons.Contig27                                25653903 0 +  26074798 C
e Cebuella_pygmaea.k141_793006                                 395 0 -     15088 C
e Cebuella_niveiventris.k141_280505                          14468 0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1367 0 -     12329 C
e Callithrix_jacchus.pat_scaffold_3                       23592553 0 - 189096842 C
e Callithrix_geoffroyi.k119_69176                              692 0 +      5377 C
e Callimico_goeldii.k141_737284                                396 0 -     31217 C
e Callibella_humilis.k141_10318                                758 0 +     27907 C
e Aotus_vociferans.k141_344750                               30135 0 -     47192 C
e Aotus_trivirgatus.k141_2152450                             17010 0 -     34685 C
e Aotus_nancymaae.KZ198451.1                               4299401 0 -   5030052 C
e Aotus_griseimembra.k141_2240599                            16974 0 -     34016 C
e Aotus_azarae.k141_3104676                                  16977 0 -     33861 C
e Alouatta_seniculus.k141_117119                             15986 0 +     50774 C
e Alouatta_puruensis.k141_362188                              1534 0 +      5663 C
e Alouatta_palliata.k141_2135620                              4802 0 +     47717 C
e Alouatta_nigerrima.k141_1929159                              807 0 +     30492 C
e Alouatta_macconnelli.k141_918386                            1851 0 -      9457 C
e Alouatta_juara.k141_1302312                                  807 0 +     27940 C
e Alouatta_discolor.k141_566626                              12294 0 +     28687 C
e Alouatta_caraya.k141_1701091                                1842 0 -     36483 C
e Alouatta_belzebul.k141_3560514                              8733 0 +     51355 C
e Mus_pahari.LT608297.1                                   31356106 6 -  89631738 I
e Mus_spretus.CM004101.1                                  90753509 6 - 130317789 I
e Mus_musculus.chr8                                       87651448 6 - 129401213 I
e Mus_caroli.LT608237.1                                   84362463 6 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015420 0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17709 0 -     33856 C
e Perodicticus_potto.k141_1186926                              572 0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            194 0 -      3244 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      15983 0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Xerus_inauris.XerIna_scaffold_2302                          2223 6 +    224448 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 11932 474 -     43706 I
e Vicugna_pacos.KN270157.1                                 5372917 0 -   5488506 C
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851544 0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   54430 1 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15739033 3 +  33153633 I
e Tupaia_tana.TupTan_flattened_line_97126                    10362 7 -     10553 I
e Tupaia_chinensis.KB320699.1                              2156915 7 +   4065304 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_40725                     765 1 +     27266 I
e Tonatia_saurophila.TonSau_scaffold_294                     82340 13 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   7495 1 +      8208 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              106514 2 +    114563 I
e Tarsius_wallacei.k141_254427                                1877 3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080 3 +     70052 I
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73754 1 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                11945 12 +     41958 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6812233 23 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629              19464 1 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             32148 1 +     97271 I
e Spermophilus_dauricus.KZ294078.1                         1955221 6 -   3870691 I
e Sorex_araneus.JH798187.1                                13652127 0 -  18376816 C
e Solenodon_paradoxus.SolPar_flattened_line_126               4882 1 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_42075                     1386 6 -     30804 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    154334 1 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                88963 12 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        368130 12 -   3329780 I
e Rattus_norvegicus.chr16                                 53571697 6 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  6410 21 +     55207 I
e Puma_concolor.QAVW01001104.1                            20275445 1 -  38429054 I
e Pteropus_vampyrus.KN534172.1                                7968 12 -      8028 I
e Pteropus_alecto.KB030862.1                              22977915 12 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         41674 1 +     42204 I
e Pteronotus_parnellii.KE909381.1                            16281 9 -     21811 I
e Psammomys_obesus.NESX01036370.1                            11491 6 -     21651 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35528 1 +     35617 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             2901 7 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9835 1 +     63832 I
e Petromus_typicus.PetTyp_scaffold_42190                     29222 2 -     29689 I
e Peromyscus_maniculatus.KI615324.1                       18195865 6 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13779 1 -     78924 I
e Pantholops_hodgsonii.KE114653.1                          1265831 21 -   2937107 I
e Panthera_tigris.KE722367.1                               4722373 1 -   8748460 I
e Panthera_pardus.KV860321.1                                265493 1 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  152284 1 +    230217 I
e Ovis_canadensis.OviCan_scaffold_2572                      174913 21 -    191736 I
e Ovis_aries.CM001607.2                                   17586936 21 +  44047080 I
e Otocyon_megalotis.JAEUCK010005147.1                       463484 482 -    559221 I
e Oryctolagus_cuniculus.CM000791.1                        67148785 6 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Orcinus_orca.KB316932.1                                  2782790 1 -  10937097 I
e Onychomys_torridus.OnyTor_scaffold_2986                    81289 6 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   26251 6 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77668 21 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              507816 1 -   2017862 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Ochotona_princeps.JH802162.1                             1365329 6 +   3988456 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771844 0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1389 0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595922 0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9150535 341 -   9404916 I
e Noctilio_leporinus.NocLep_scaffold_251                    758990 17 +    783361 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866881 1 +   7148211 I
e Neomonachus_schauinslandi.NINY01007730.1                20308671 1 +  31847680 I
e Nannospalax_galili.KL204047.1                            2035627 0 -   3037898 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190387 1 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_281845                        1115 11 +      1835 I
e Myotis_lucifugus.GL429869.1                              3904963 11 -   4330536 I
e Myotis_davidii.KB100139.1                                1588866 11 -   6019432 I
e Myotis_brandtii.KE162005.1                                281611 11 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     72300 2 -     80779 I
e Mustela_putorius.JH418006.1                               302867 1 -  14710649 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           7969 11 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398 7 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1836 21 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 142786 15 -    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27912 1 -    437263 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7078 1 -      8324 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             35221 4 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1851541 4 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11261600 6 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                16995 13 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    4402 1 +     10310 I
e Mesocricetus_auratus.KB708134.1                         12183301 6 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 33845 6 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365             11474 1 +     13704 I
e Megaderma_lyra.MegLyr_scaffold_4542                        14475 12 -    207569 I
e Marmota_marmota.CZRN01000018.1                          33104362 6 -  40650429 I
e Manis_pentadactyla.KN006162.1                              51381 1 -    317179 I
e Manis_javanica.JSZB01003497.1                              19395 1 +    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_8222                 91773 12 +     94391 I
e Macaca_mulatta.NC_041758.1                             186840566 0 + 187317192 C
e Lycaon_pictus.CM007581.1                                17956469 472 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268797 1 -    662738 I
e Lepus_americanus.LepAme_scaffold_107385                     7884 6 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044211 1 +   3914936 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Lasiurus_borealis.LasBor_scaffold_32767                    17527 78 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                3107 1 -      3359 I
e Jaculus_jaculus.JH725527.1                               8278247 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23736 1 +     23964 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7522075 6 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      84190 6 +    135385 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  46155 1 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_101188                214 12 +      9903 I
e Hipposideros_armiger.JXIK01000431.1                       111644 12 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20663309 2 +  22651954 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18961 21 +     36099 I
e Helogale_parvula.HelPar_flattened_line_2585               243459 1 +    327341 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Graphiurus_murinus.GraMur_scaffold_10447                   33744 11 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            32063 0 +     49224 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609755 21 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_108840               2324 251 -      9135 I
e Galagoides_demidoff.k141_1711393                            4664 0 +     41679 C
e Fukomys_damarensis.KN121974.1                             851538 2 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                 10676 1 -     36744 I
e Felis_catus_fca126.CM031415.1                           20196922 1 + 205367284 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Eubalaena_japonica.EubJap_flattened_line_31514             26146 1 -     44125 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           12193 1 +    133382 I
e Erinaceus_europaeus.JH835339.1                           3329343 1 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2146873 12 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16330760 1 -  41312741 I
e Ellobius_talpinus.LOJH01081419.1                            1523 6 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          21617 6 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311790 21 +    607251 I
e Eidolon_helvum.KE759718.1                                  11681 12 +     11740 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    37488 2 +     67921 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8631244 13 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812529 1 +  35494412 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64622 1 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  36984 2 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838204 6 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             29614 1 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_37019               4057 0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11668605 6 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 51160 6 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           1614 12 +     23735 I
e Condylura_cristata.JH655891.1                           17549176 1 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1254015 2 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1599 1 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Cephalopachus_bancanus.k141_1423433                         6085 3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     94669 29 +    217609 I
e Castor_canadensis.CasCan_scaffold_2074                    138427 6 +    179628 I
e Carollia_perspicillata.CarPer_scaffold_92756                6247 4 -     11696 I
e Carlito_syrichta.NW_007259797.1                           156587 3 -    496798 I
e Capromys_pilorides.CapPil_scaffold_65020                    2117 2 -     12242 I
e Capra_hircus.CM004588.1                                 18061476 21 -  44709034 I
e Capra_aegagrus.CM003241.1                               18830756 21 +  46296322 I
e Canis_lupus_orion.HG994398.1                            18501526 477 +  63665305 I
e Canis_lupus_familiaris.chr16                            17960229 472 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9035753 477 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     1058 472 -     43241 I
e CanFam4.chr16                                           17800310 477 -  60362399 I
e Camelus_ferus.KB017975.1                                  404170 0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2335871 0 -   7040546 C
e Camelus_bactrianus.KN276810.1                           10003395 0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2820128 21 +   4408762 I
e Bos_taurus.CM000184.6                                   18200496 21 - 114055384 I
e Bos_mutus.JH880303.1                                     1126378 21 -   1948126 I
e Bos_indicus.CM003028.1                                  18363522 21 - 116941312 I
e Bison_bison.KN261452.1                                    200637 21 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    27560 21 +     34529 I
e Balaenoptera_bonaerensis.DF707048.1                         3346 1 -     18090 I
e Balaenoptera_acutorostrata.KI537508.1                   15192881 1 +  23207421 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  5878 13 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         513 0 +      5281 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      13748 6 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             99127 21 -    100397 I
e Anoura_caudifer.AnoCau_scaffold_1412                      186495 13 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676638 21 -   2318259 I
e Allactaga_bullata.AllBul_scaffold_9566                     75585 0 -     89534 C
e Ailurus_fulgens.LNAC01001112.1                             80803 1 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9511730 1 -  29979442 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     71882 6 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           828437 1 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       7975 16 +     62944 gtgtgtgtgtgtgtgt
s Allenopithecus_nigroviridis.k141_3361533                   15904  1 -     52922 a---------------
i Allenopithecus_nigroviridis.k141_3361533               I 9 I 1
s Allochrocebus_lhoesti.k141_4309873                         15818  1 -     28001 A---------------
i Allochrocebus_lhoesti.k141_4309873                     I 1 I 1
s Allochrocebus_preussi.k141_1442296                          6318  1 -     18505 A---------------
i Allochrocebus_preussi.k141_1442296                     I 1 I 1
s Allochrocebus_solatus.k141_166128                           7170  1 -     12518 A---------------
i Allochrocebus_solatus.k141_166128                      I 1 I 1
s Cercocebus_atys.KQ010504.1                               4476835  1 +   4669795 a---------------
i Cercocebus_atys.KQ010504.1                             I 4 I 1
s Cercocebus_chrysogaster.k141_1540778                        1337  1 +     17872 A---------------
i Cercocebus_chrysogaster.k141_1540778                   I 4 I 1
s Cercocebus_lunulatus.k141_3342297                           1926  1 -     14043 A---------------
i Cercocebus_lunulatus.k141_3342297                      I 4 I 1
s Cercocebus_torquatus.k141_3057011                          10031  1 +     27781 A---------------
i Cercocebus_torquatus.k141_3057011                      I 4 I 1
s Cercopithecus_ascanius.k141_1024104                        10187  1 -     20310 A---------------
i Cercopithecus_ascanius.k141_1024104                    I 1 I 1
s Cercopithecus_cephus.k141_1078548                          13167  1 +     29689 A---------------
i Cercopithecus_cephus.k141_1078548                      I 1 I 1
s Cercopithecus_diana.k141_1150327                            7917  1 -     20078 G---------------
i Cercopithecus_diana.k141_1150327                       I 1 I 1
s Cercopithecus_hamlyni.k141_187466                          15839  1 -     27936 A---------------
i Cercopithecus_hamlyni.k141_187466                      I 1 I 1
s Cercopithecus_lowei.k141_1854285                            4705  1 -     17152 A---------------
i Cercopithecus_lowei.k141_1854285                       I 1 I 1
s Cercopithecus_albogularis.ctg5                                38818246  1 +  39242232 A---------------
i Cercopithecus_albogularis.ctg5                               I 1 I 1
s Cercopithecus_mona.ctg39                                21223939  1 -  21565898 A---------------
i Cercopithecus_mona.ctg39                               I 1 I 1
s Cercopithecus_neglectus.k141_2526306                       41058  1 -     53127 A---------------
i Cercopithecus_neglectus.k141_2526306                   I 1 I 1
s Cercopithecus_nictitans.k141_1119862                        1305  1 +     13442 A---------------
i Cercopithecus_nictitans.k141_1119862                   I 1 I 1
s Cercopithecus_petaurista.k141_807961                       15858  1 -     27947 A---------------
i Cercopithecus_petaurista.k141_807961                   I 1 I 1
s Cercopithecus_pogonias.k141_822820                         15834  1 +     17596 A---------------
i Cercopithecus_pogonias.k141_822820                     I 1 I 1
s Cercopithecus_roloway.k141_2581234                          1885  1 +     14005 G---------------
i Cercopithecus_roloway.k141_2581234                     I 1 I 1
s Chlorocebus_aethiops.ctg25                              18429824  1 -  18827391 A---------------
i Chlorocebus_aethiops.ctg25                             I 1 I 1
s Chlorocebus_pygerythrus.k141_1025673                       16258  1 -     50209 A---------------
i Chlorocebus_pygerythrus.k141_1025673                   I 1 I 1
s Chlorocebus_sabaeus.CM001947.1                         135423259  1 + 135778131 a---------------
i Chlorocebus_sabaeus.CM001947.1                         I 1 I 1
s Erythrocebus_patas.Contig38                             21206424  1 -  21539334 A---------------
i Erythrocebus_patas.Contig38                            I 1 I 1
s Gorilla_beringei.k141_3596273                              17230  1 -     32273 G---------------
i Gorilla_beringei.k141_3596273                          C 0 I 1
s Gorilla_gorilla.LT578341.1                             186339367  1 + 186649187 g---------------
i Gorilla_gorilla.LT578341.1                             C 0 I 1
s Hoolock_leuconedys.ctg274                                    436039  1 +    630532 g---------------
i Hoolock_leuconedys.ctg274                                 C 0 I 1
s Lophocebus_aterrimus.ctg367                              1438388  1 +   1826925 A---------------
i Lophocebus_aterrimus.ctg367                            I 4 I 1
s Macaca_arctoides.k141_2326796                               8199  1 +     40492 A---------------
i Macaca_arctoides.k141_2326796                          I 4 I 1
s Macaca_cyclopis.k119_18836                                 13976  1 -     26193 a---------------
i Macaca_cyclopis.k119_18836                             I 4 I 1
s Macaca_fascicularis.k141_814140                            81754  1 -    114318 A---------------
i Macaca_fascicularis.k141_814140                        I 4 I 1
s Macaca_fuscata.k119_255327                                  7445  1 -     23192 A---------------
i Macaca_fuscata.k119_255327                             I 4 I 1
s Macaca_leonina.k141_3550399                                16909  1 -     29190 a---------------
i Macaca_leonina.k141_3550399                            I 1 I 1
s Macaca_maura.k141_2733130                                  25487  1 +     37952 a---------------
i Macaca_maura.k141_2733130                              I 4 I 1
s Macaca_nemestrina.KQ007038.1                            25459142  1 -  25927173 a---------------
i Macaca_nemestrina.KQ007038.1                           I 4 I 1
s Macaca_nigra.k141_1655396                                  81343  1 +     89720 a---------------
i Macaca_nigra.k141_1655396                              I 4 I 1
s Macaca_radiata.k141_3680011                                 8336  1 +     20474 A---------------
i Macaca_radiata.k141_3680011                            I 4 I 1
s Macaca_siberu.k141_635500                                   8133  1 -     14993 a---------------
i Macaca_siberu.k141_635500                              I 4 I 1
s Macaca_silenus.Contig273                                  330995  1 -    668171 a---------------
i Macaca_silenus.Contig273                               I 1 I 1
s Macaca_tonkeana.k141_1498238                               27076  1 -     45290 a---------------
i Macaca_tonkeana.k141_1498238                           I 4 I 1
s Mandrillus_leucophaeus.scaffold280                      23938659  1 -  24302211 A---------------
i Mandrillus_leucophaeus.scaffold280                     I 4 I 1
s Mandrillus_sphinx.Contig270                               352779  1 +    752769 A---------------
i Mandrillus_sphinx.Contig270                            I 4 I 1
s Miopithecus_ogouensis.k141_534055                          10337  1 -     28506 A---------------
i Miopithecus_ogouensis.k141_534055                      I 1 I 1
s Nasalis_larvatus.k141_413338                               16362  1 +     21681 A---------------
i Nasalis_larvatus.k141_413338                           I 4 I 1
s Pan_paniscus.KQ411613.1                                    45318 16 +     80009 gtgtgtgtgtgtgtgt
i Pan_paniscus.KQ411613.1                                C 0 I 2
s Pan_troglodytes.KZ622849.1                                 23505 16 +    110857 gtgtgtgtgtgtgtgt
i Pan_troglodytes.KZ622849.1                             C 0 I 84
s Papio_anubis.CM001495.2                                183444461  1 + 183742232 a---------------
i Papio_anubis.CM001495.2                                I 4 I 1
s Papio_cynocephalus.k141_4307930                             8111  1 +     20448 A---------------
i Papio_cynocephalus.k141_4307930                        I 4 I 1
s Papio_hamadryas.Contig39                                20564919  1 +  20919399 A---------------
i Papio_hamadryas.Contig39                               I 4 I 1
s Papio_kindae.k141_1936966                                   6851  1 +     41871 A---------------
i Papio_kindae.k141_1936966                              I 4 I 1
s Papio_papio.k141_802527                                    10144  1 +     27711 A---------------
i Papio_papio.k141_802527                                I 4 I 1
s Papio_ursinus.k141_5274964                                  1141  1 -     11374 A---------------
i Papio_ursinus.k141_5274964                             I 4 I 1
s Piliocolobus_badius.k141_1234363                           44858  1 +     62158 A---------------
i Piliocolobus_badius.k141_1234363                       I 4 I 1
s Piliocolobus_gordonorum.k141_381342                        39607  1 +     89929 a---------------
i Piliocolobus_gordonorum.k141_381342                    I 4 I 1
s Piliocolobus_kirkii.k141_448987                            41021  1 +     51399 A---------------
i Piliocolobus_kirkii.k141_448987                        I 4 I 1
s Piliocolobus_tephrosceles.PDMG02000141.1                14297264  1 -  14605196 a---------------
i Piliocolobus_tephrosceles.PDMG02000141.1               I 4 I 1
s Pongo_abelii.CM009266.2                                189132361  1 + 189387572 g---------------
i Pongo_abelii.CM009266.2                                C 0 I 1
s Pongo_pygmaeus.ctg66                                     9571968  1 +   9816681 G---------------
i Pongo_pygmaeus.ctg66                                   C 0 I 1
s Presbytis_comata.k141_677006                               74547  1 -     81375 a---------------
i Presbytis_comata.k141_677006                           I 4 I 1
s Presbytis_mitrata.k141_1087752                              6364  1 +     19060 A---------------
i Presbytis_mitrata.k141_1087752                         I 4 I 1
s Pygathrix_cinerea.k141_1153803                             16348  1 -     91421 A---------------
i Pygathrix_cinerea.k141_1153803                         I 4 I 1
s Pygathrix_nigripes_b.ctg100                                 7610468  1 +   7812017 A---------------
i Pygathrix_nigripes_b.ctg100                               I 4 I 1
s Pygathrix_nigripes_a.k141_215492                             16347  1 -     72585 A---------------
i Pygathrix_nigripes_a.k141_215492                         I 4 I 1
s Rhinopithecus_bieti.k119_217274                             8064  1 -     11128 a---------------
i Rhinopithecus_bieti.k119_217274                        I 4 I 1
s Rhinopithecus_roxellana.NC_044550.1                     91237413  1 - 195417433 a---------------
i Rhinopithecus_roxellana.NC_044550.1                    I 4 I 1
s Rhinopithecus_strykeri.ctg102                            7673075  1 +   7961872 a---------------
i Rhinopithecus_strykeri.ctg102                          I 4 I 1
s Semnopithecus_entellus.k141_1672505                         1243  1 -     12572 a---------------
i Semnopithecus_entellus.k141_1672505                    I 4 I 1
s Semnopithecus_hypoleucos.k141_1615806                      28095  1 +     39453 a---------------
i Semnopithecus_hypoleucos.k141_1615806                  I 4 I 1
s Semnopithecus_johnii.k141_670120                            8603  1 +     27826 A---------------
i Semnopithecus_johnii.k141_670120                       I 4 I 1
s Semnopithecus_priam.k141_638794                             8137  1 -     19483 a---------------
i Semnopithecus_priam.k141_638794                        I 4 I 1
s Semnopithecus_schistaceus.k141_1572284                      1442  1 -     12762 a---------------
i Semnopithecus_schistaceus.k141_1572284                 I 4 I 1
s Semnopithecus_vetulus.k141_910252                           1289  1 +     13763 A---------------
i Semnopithecus_vetulus.k141_910252                      I 4 I 1
s Theropithecus_gelada.CM009954.1                        186429767  1 + 186847797 a---------------
i Theropithecus_gelada.CM009954.1                        I 4 I 1
s Trachypithecus_auratus.k141_722599                         12188  1 -     20410 a---------------
i Trachypithecus_auratus.k141_722599                     I 4 I 1
s Trachypithecus_crepusculus.k141_582567                      1304  1 -     12674 a---------------
i Trachypithecus_crepusculus.k141_582567                 I 4 I 1
s Trachypithecus_cristatus.k141_580354                       12295  1 +     19930 a---------------
i Trachypithecus_cristatus.k141_580354                   I 4 I 1
s Trachypithecus_francoisi.k141_1412647                       8692  1 -     19997 A---------------
i Trachypithecus_francoisi.k141_1412647                  I 4 I 1
s Trachypithecus_geei.k141_277701                            48837  1 -     60166 a---------------
i Trachypithecus_geei.k141_277701                        I 4 I 1
s Trachypithecus_germaini.k141_912491                        16299  1 -     27529 A---------------
i Trachypithecus_germaini.k141_912491                    I 4 I 1
s Trachypithecus_hatinhensis.k141_143409                     16249  1 -     18194 A---------------
i Trachypithecus_hatinhensis.k141_143409                 I 4 I 1
s Trachypithecus_laotum.k141_907409                           9961  1 -     21137 A---------------
i Trachypithecus_laotum.k141_907409                      I 4 I 1
s Trachypithecus_leucocephalus.k141_587342                    8662  1 -     10723 A---------------
i Trachypithecus_leucocephalus.k141_587342               I 4 I 1
s Trachypithecus_melamera.k141_434728                         7838  1 +      9834 a---------------
i Trachypithecus_melamera.k141_434728                    I 4 I 1
s Trachypithecus_obscurus.k141_190785                        26161  1 +     32220 a---------------
i Trachypithecus_obscurus.k141_190785                    I 4 I 1
s Trachypithecus_phayrei.ctg124                            5940257  1 +   6242583 a---------------
i Trachypithecus_phayrei.ctg124                          I 4 I 1
s Trachypithecus_pileatus.k141_2007326                        9510  1 +     20839 a---------------
i Trachypithecus_pileatus.k141_2007326                   I 4 I 1
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699416  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7177  0 +      8798 C
e Galago_senegalensis.k141_631886                             7375  0 +     11339 C
e Galago_moholi.ctg2040                                     429685  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57098  0 -     80660 C
e Sapajus_apella.ctg103                                    5421857  0 -   5703754 C
e Saimiri_ustus.k141_1484609                                 24513  0 -     61129 C
e Saimiri_sciureus.k141_2278166                               4369  0 -     23631 C
e Saimiri_oerstedii.k141_1487881                             41296  0 -     64574 C
e Saimiri_macrodon.k141_716185                               24617  0 +     45824 C
e Saimiri_cassiquiarensis.k141_2188234                       24522  0 +     46362 C
e Saimiri_boliviensis.NW_024100920.1                     119952180  0 - 121099817 C
e Saguinus_mystax.k141_4699220                                 542  0 -      7576 C
e Saguinus_midas.LG03                                    209476098  0 + 209938924 C
e Saguinus_labiatus.k141_4004060                              1219  0 +      2343 C
e Saguinus_inustus.k141_3945547                               1566  0 -      8737 C
e Saguinus_imperator.k141_1496743                             1137  0 +      2253 C
e Saguinus_bicolor.k141_8081                                  2440  0 +     42994 C
e Mico_schneideri.k141_916733                                        395  0 +      5107 C
e Mico_humeralifer.k141_1346949                                808  0 +      1399 C
e Mico_argentatus.k141_1024458                                 395  0 -     20047 C
e Leontopithecus_rosalia.k141_464620                         27480  0 +     66356 C
e Leontopithecus_chrysomelas.k141_1519602                    30776  0 +     38576 C
e Leontocebus_nigricollis.k141_4610752                        9157  0 +     35603 C
e Leontocebus_illigeri.k141_1304848                           1470  0 -     35062 C
e Leontocebus_fuscicollis.k141_1820339                        9128  0 +     64341 C
e Chiropotes_albinasus.k141_2206961                           2175  0 -     15524 C
e Cebus_unicolor.k141_1837183                                 1570  0 +     14051 C
e Cebus_olivaceus.k141_1764483                                1841  0 +     28840 C
e Cebus_albifrons.Contig27                                25653903  0 +  26074798 C
e Cebuella_pygmaea.k141_793006                                 395  0 -     15088 C
e Cebuella_niveiventris.k141_280505                          14468  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1367  0 -     12329 C
e Callithrix_jacchus.pat_scaffold_3                       23592553  0 - 189096842 C
e Callithrix_geoffroyi.k119_69176                              692  0 +      5377 C
e Callimico_goeldii.k141_737284                                396  0 -     31217 C
e Callibella_humilis.k141_10318                                758  0 +     27907 C
e Aotus_vociferans.k141_344750                               30135  0 -     47192 C
e Aotus_trivirgatus.k141_2152450                             17010  0 -     34685 C
e Aotus_nancymaae.KZ198451.1                               4299401  0 -   5030052 C
e Aotus_griseimembra.k141_2240599                            16974  0 -     34016 C
e Aotus_azarae.k141_3104676                                  16977  0 -     33861 C
e Alouatta_seniculus.k141_117119                             15986  0 +     50774 C
e Alouatta_puruensis.k141_362188                              1534  0 +      5663 C
e Alouatta_palliata.k141_2135620                              4802  0 +     47717 C
e Alouatta_nigerrima.k141_1929159                              807  0 +     30492 C
e Alouatta_macconnelli.k141_918386                            1851  0 -      9457 C
e Alouatta_juara.k141_1302312                                  807  0 +     27940 C
e Alouatta_discolor.k141_566626                              12294  0 +     28687 C
e Alouatta_caraya.k141_1701091                                1842  0 -     36483 C
e Alouatta_belzebul.k141_3560514                              8733  0 +     51355 C
e Mus_pahari.LT608297.1                                   31356106  6 -  89631738 I
e Mus_spretus.CM004101.1                                  90753509  6 - 130317789 I
e Mus_musculus.chr8                                       87651448  6 - 129401213 I
e Mus_caroli.LT608237.1                                   84362463  6 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015420  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17709  0 -     33856 C
e Perodicticus_potto.k141_1186926                              572  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            194  0 -      3244 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      15983  0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Xerus_inauris.XerIna_scaffold_2302                          2223  6 +    224448 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 11932 474 -     43706 I
e Vicugna_pacos.KN270157.1                                 5372917  0 -   5488506 C
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851544  0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   54430  1 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15739033  3 +  33153633 I
e Tupaia_tana.TupTan_flattened_line_97126                    10362  7 -     10553 I
e Tupaia_chinensis.KB320699.1                              2156915  7 +   4065304 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_40725                     765  1 +     27266 I
e Tonatia_saurophila.TonSau_scaffold_294                     82340 13 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   7495  1 +      8208 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              106514  2 +    114563 I
e Tarsius_wallacei.k141_254427                                1877  3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080  3 +     70052 I
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73754  1 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                11945 12 +     41958 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6812233 23 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629              19464  1 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             32148  1 +     97271 I
e Spermophilus_dauricus.KZ294078.1                         1955221  6 -   3870691 I
e Sorex_araneus.JH798187.1                                13652127  0 -  18376816 C
e Solenodon_paradoxus.SolPar_flattened_line_126               4882  1 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_42075                     1386  6 -     30804 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    154334  1 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                88963 12 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        368130 12 -   3329780 I
e Rattus_norvegicus.chr16                                 53571697  6 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  6410 21 +     55207 I
e Puma_concolor.QAVW01001104.1                            20275445  1 -  38429054 I
e Pteropus_vampyrus.KN534172.1                                7968 12 -      8028 I
e Pteropus_alecto.KB030862.1                              22977915 12 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         41674  1 +     42204 I
e Pteronotus_parnellii.KE909381.1                            16281  9 -     21811 I
e Psammomys_obesus.NESX01036370.1                            11491  6 -     21651 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35528  1 +     35617 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             2901  7 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9835  1 +     63832 I
e Petromus_typicus.PetTyp_scaffold_42190                     29222  2 -     29689 I
e Peromyscus_maniculatus.KI615324.1                       18195865  6 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13779  1 -     78924 I
e Pantholops_hodgsonii.KE114653.1                          1265831 21 -   2937107 I
e Panthera_tigris.KE722367.1                               4722373  1 -   8748460 I
e Panthera_pardus.KV860321.1                                265493  1 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  152284  1 +    230217 I
e Ovis_canadensis.OviCan_scaffold_2572                      174913 21 -    191736 I
e Ovis_aries.CM001607.2                                   17586936 21 +  44047080 I
e Otocyon_megalotis.JAEUCK010005147.1                       463484 482 -    559221 I
e Oryctolagus_cuniculus.CM000791.1                        67148785  6 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Orcinus_orca.KB316932.1                                  2782790  1 -  10937097 I
e Onychomys_torridus.OnyTor_scaffold_2986                    81289  6 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   26251  6 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77668 21 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              507816  1 -   2017862 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Ochotona_princeps.JH802162.1                             1365329  6 +   3988456 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771844  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1389  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595922  0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9150535 341 -   9404916 I
e Noctilio_leporinus.NocLep_scaffold_251                    758990 17 +    783361 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866881  1 +   7148211 I
e Neomonachus_schauinslandi.NINY01007730.1                20308671  1 +  31847680 I
e Nannospalax_galili.KL204047.1                            2035627  0 -   3037898 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190387  1 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_281845                        1115 11 +      1835 I
e Myotis_lucifugus.GL429869.1                              3904963 11 -   4330536 I
e Myotis_davidii.KB100139.1                                1588866 11 -   6019432 I
e Myotis_brandtii.KE162005.1                                281611 11 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     72300  2 -     80779 I
e Mustela_putorius.JH418006.1                               302867  1 -  14710649 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           7969 11 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1836 21 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 142786 15 -    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27912  1 -    437263 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7078  1 -      8324 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             35221  4 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1851541  4 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11261600  6 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                16995 13 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    4402  1 +     10310 I
e Mesocricetus_auratus.KB708134.1                         12183301  6 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 33845  6 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365             11474  1 +     13704 I
e Megaderma_lyra.MegLyr_scaffold_4542                        14475 12 -    207569 I
e Marmota_marmota.CZRN01000018.1                          33104362  6 -  40650429 I
e Manis_pentadactyla.KN006162.1                              51381  1 -    317179 I
e Manis_javanica.JSZB01003497.1                              19395  1 +    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_8222                 91773 12 +     94391 I
e Macaca_thibetana.k99_256239                                 6445  2 -     24072 I
e Macaca_mulatta.NC_041758.1                             186840566  0 + 187317192 C
e Macaca_assamensis.Contig5                               59677460  2 +  60120075 I
e Lycaon_pictus.CM007581.1                                17956469 472 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268797  1 -    662738 I
e Lepus_americanus.LepAme_scaffold_107385                     7884  6 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044211  1 +   3914936 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Lasiurus_borealis.LasBor_scaffold_32767                    17527 78 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                3107  1 -      3359 I
e Jaculus_jaculus.JH725527.1                               8278247  0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23736  1 +     23964 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7522075  6 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      84190  6 +    135385 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  46155  1 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_101188                214 12 +      9903 I
e Hipposideros_armiger.JXIK01000431.1                       111644 12 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20663309  2 +  22651954 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18961 21 +     36099 I
e Helogale_parvula.HelPar_flattened_line_2585               243459  1 +    327341 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Graphiurus_murinus.GraMur_scaffold_10447                   33744 11 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            32063  0 +     49224 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609755 21 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_108840               2324 251 -      9135 I
e Galagoides_demidoff.k141_1711393                            4664  0 +     41679 C
e Fukomys_damarensis.KN121974.1                             851538  2 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                 10676  1 -     36744 I
e Felis_catus_fca126.CM031415.1                           20196922  1 + 205367284 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Eubalaena_japonica.EubJap_flattened_line_31514             26146  1 -     44125 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           12193  1 +    133382 I
e Erinaceus_europaeus.JH835339.1                           3329343  1 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2146873 12 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16330760  1 -  41312741 I
e Ellobius_talpinus.LOJH01081419.1                            1523  6 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          21617  6 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311790 21 +    607251 I
e Eidolon_helvum.KE759718.1                                  11681 12 +     11740 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    37488  2 +     67921 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8631244 13 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812529  1 +  35494412 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64622  1 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  36984  2 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838204  6 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             29614  1 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_37019               4057  0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11668605  6 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 51160  6 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           1614 12 +     23735 I
e Condylura_cristata.JH655891.1                           17549176  1 -  53390261 I
e Colobus_polykomos.k141_906115                              38271  2 +     84244 I
e Colobus_guereza.LG01                                   199949991  2 + 200372422 I
e Colobus_angolensis.KN981557.1                            1911743  2 +   2368649 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1254015  2 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1599  1 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Cephalopachus_bancanus.k141_1423433                         6085  3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     94669 29 +    217609 I
e Castor_canadensis.CasCan_scaffold_2074                    138427  6 +    179628 I
e Carollia_perspicillata.CarPer_scaffold_92756                6247  4 -     11696 I
e Carlito_syrichta.NW_007259797.1                           156587  3 -    496798 I
e Capromys_pilorides.CapPil_scaffold_65020                    2117  2 -     12242 I
e Capra_hircus.CM004588.1                                 18061476 21 -  44709034 I
e Capra_aegagrus.CM003241.1                               18830756 21 +  46296322 I
e Canis_lupus_orion.HG994398.1                            18501526 477 +  63665305 I
e Canis_lupus_familiaris.chr16                            17960229 472 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9035753 477 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     1058 472 -     43241 I
e CanFam4.chr16                                           17800310 477 -  60362399 I
e Camelus_ferus.KB017975.1                                  404170  0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2335871  0 -   7040546 C
e Camelus_bactrianus.KN276810.1                           10003395  0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2820128 21 +   4408762 I
e Bos_taurus.CM000184.6                                   18200496 21 - 114055384 I
e Bos_mutus.JH880303.1                                     1126378 21 -   1948126 I
e Bos_indicus.CM003028.1                                  18363522 21 - 116941312 I
e Bison_bison.KN261452.1                                    200637 21 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    27560 21 +     34529 I
e Balaenoptera_bonaerensis.DF707048.1                         3346  1 -     18090 I
e Balaenoptera_acutorostrata.KI537508.1                   15192881  1 +  23207421 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  5878 13 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         513  0 +      5281 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      13748  6 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             99127 21 -    100397 I
e Anoura_caudifer.AnoCau_scaffold_1412                      186495 13 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676638 21 -   2318259 I
e Allactaga_bullata.AllBul_scaffold_9566                     75585  0 -     89534 C
e Ailurus_fulgens.LNAC01001112.1                             80803  1 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9511730  1 -  29979442 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     71882  6 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           828437  1 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       7991 2 +     62944 a--c
s Allenopithecus_nigroviridis.k141_3361533                   15906 2 -     52922 a--c
i Allenopithecus_nigroviridis.k141_3361533               I 1 C 0
s Allochrocebus_lhoesti.k141_4309873                         15820 2 -     28001 A--C
i Allochrocebus_lhoesti.k141_4309873                     I 1 C 0
s Allochrocebus_preussi.k141_1442296                          6320 2 -     18505 A--C
i Allochrocebus_preussi.k141_1442296                     I 1 C 0
s Allochrocebus_solatus.k141_166128                           7172 2 -     12518 A--C
i Allochrocebus_solatus.k141_166128                      I 1 C 0
s Alouatta_belzebul.k141_3560514                              8733 2 +     51355 A--C
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                1842 2 -     36483 A--C
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              12294 2 +     28687 A--C
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                  807 2 +     27940 A--C
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            1851 2 -      9457 A--C
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                              807 2 +     30492 A--C
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              4802 2 +     47717 A--C
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              1534 2 +      5663 A--C
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             15986 2 +     50774 A--C
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  16977 2 -     33861 A--C
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            16974 2 -     34016 A--C
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299401 2 -   5030052 a--c
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             17010 2 -     34685 A--C
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               30135 2 -     47192 A--C
i Aotus_vociferans.k141_344750                           C 0 C 0
s Arctocebus_calabarensis.k141_1648548                         513 2 +      5281 A--C
i Arctocebus_calabarensis.k141_1648548                   C 0 C 0
s Callibella_humilis.k141_10318                                758 2 +     27907 A--C
i Callibella_humilis.k141_10318                          C 0 C 0
s Callimico_goeldii.k141_737284                                396 2 -     31217 A--C
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                              692 2 +      5377 A--C
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592553 2 - 189096842 A--C
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1367 2 -     12329 A--C
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Cebuella_niveiventris.k141_280505                          14468 2 +     15466 A--C
i Cebuella_niveiventris.k141_280505                      C 0 C 0
s Cebuella_pygmaea.k141_793006                                 395 2 -     15088 A--C
i Cebuella_pygmaea.k141_793006                           C 0 C 0
s Cebus_albifrons.Contig27                                25653903 2 +  26074798 A--C
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                1841 2 +     28840 A--C
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 1570 2 +     14051 A--C
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Cercocebus_atys.KQ010504.1                               4476837 2 +   4669795 a--c
i Cercocebus_atys.KQ010504.1                             I 1 C 0
s Cercocebus_chrysogaster.k141_1540778                        1339 2 +     17872 A--C
i Cercocebus_chrysogaster.k141_1540778                   I 1 C 0
s Cercocebus_lunulatus.k141_3342297                           1928 2 -     14043 A--C
i Cercocebus_lunulatus.k141_3342297                      I 1 C 0
s Cercocebus_torquatus.k141_3057011                          10033 2 +     27781 A--C
i Cercocebus_torquatus.k141_3057011                      I 1 C 0
s Cercopithecus_ascanius.k141_1024104                        10189 2 -     20310 A--C
i Cercopithecus_ascanius.k141_1024104                    I 1 C 0
s Cercopithecus_cephus.k141_1078548                          13169 2 +     29689 A--C
i Cercopithecus_cephus.k141_1078548                      I 1 C 0
s Cercopithecus_diana.k141_1150327                            7919 2 -     20078 A--C
i Cercopithecus_diana.k141_1150327                       I 1 C 0
s Cercopithecus_hamlyni.k141_187466                          15841 2 -     27936 A--C
i Cercopithecus_hamlyni.k141_187466                      I 1 C 0
s Cercopithecus_lowei.k141_1854285                            4707 2 -     17152 A--C
i Cercopithecus_lowei.k141_1854285                       I 1 C 0
s Cercopithecus_albogularis.ctg5                                38818248 2 +  39242232 A--C
i Cercopithecus_albogularis.ctg5                               I 1 C 0
s Cercopithecus_mona.ctg39                                21223941 2 -  21565898 A--C
i Cercopithecus_mona.ctg39                               I 1 C 0
s Cercopithecus_neglectus.k141_2526306                       41060 2 -     53127 A--C
i Cercopithecus_neglectus.k141_2526306                   I 1 C 0
s Cercopithecus_nictitans.k141_1119862                        1307 2 +     13442 A--C
i Cercopithecus_nictitans.k141_1119862                   I 1 C 0
s Cercopithecus_petaurista.k141_807961                       15860 2 -     27947 A--C
i Cercopithecus_petaurista.k141_807961                   I 1 I 33
s Cercopithecus_pogonias.k141_822820                         15836 2 +     17596 A--C
i Cercopithecus_pogonias.k141_822820                     I 1 C 0
s Cercopithecus_roloway.k141_2581234                          1887 2 +     14005 A--C
i Cercopithecus_roloway.k141_2581234                     I 1 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1600 1 -      8501 ---G
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       I 1 C 0
s Chiropotes_albinasus.k141_2206961                           2175 2 -     15524 A--C
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18429826 2 -  18827391 A--C
i Chlorocebus_aethiops.ctg25                             I 1 C 0
s Chlorocebus_pygerythrus.k141_1025673                       16260 2 -     50209 A--C
i Chlorocebus_pygerythrus.k141_1025673                   I 1 C 0
s Chlorocebus_sabaeus.CM001947.1                         135423261 2 + 135778131 a--c
i Chlorocebus_sabaeus.CM001947.1                         I 1 C 0
s Colobus_angolensis.KN981557.1                            1911745 2 +   2368649 a--c
i Colobus_angolensis.KN981557.1                          I 2 C 0
s Colobus_guereza.LG01                                   199949993 2 + 200372422 A--C
i Colobus_guereza.LG01                                   I 2 C 0
s Colobus_polykomos.k141_906115                              38273 2 +     84244 A--C
i Colobus_polykomos.k141_906115                          I 2 C 0
s Dasypus_novemcinctus.JH564415.1                            64623 1 +   2246927 ---G
i Dasypus_novemcinctus.JH564415.1                        I 1 C 0
s Erythrocebus_patas.Contig38                             21206426 2 -  21539334 A--C
i Erythrocebus_patas.Contig38                            I 1 C 0
s Galago_moholi.ctg2040                                     429685 2 -    453645 A--C
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             7375 2 +     11339 A--C
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            4664 2 +     41679 A--C
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               2575 2 -      9135 a--t
i Galeopterus_variegatus.GalVar_scaffold_108840          I 251 C 0
s Gorilla_beringei.k141_3596273                              17232 2 -     32273 A--C
i Gorilla_beringei.k141_3596273                          I 1 C 0
s Gorilla_gorilla.LT578341.1                             186339369 2 + 186649187 a--c
i Gorilla_gorilla.LT578341.1                             I 1 C 0
s Hoolock_leuconedys.ctg274                                    436041 2 +    630532 a--c
i Hoolock_leuconedys.ctg274                                 I 1 C 0
s Leontocebus_fuscicollis.k141_1820339                        9128 2 +     64341 A--C
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           1470 2 -     35062 A--C
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        9157 2 +     35603 A--C
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    30776 2 +     38576 A--C
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         27480 2 +     66356 A--C
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lophocebus_aterrimus.ctg367                              1438390 2 +   1826925 A--C
i Lophocebus_aterrimus.ctg367                            I 1 C 0
s Loris_lydekkerianus.k141_399337                            17709 2 -     33856 A--C
i Loris_lydekkerianus.k141_399337                        C 0 C 0
s Loris_tardigradus.ctg83                                  1015420 2 +   6120653 A--C
i Loris_tardigradus.ctg83                                C 0 C 0
s Macaca_arctoides.k141_2326796                               8201 2 +     40492 A--C
i Macaca_arctoides.k141_2326796                          I 1 C 0
s Macaca_assamensis.Contig5                               59677462 2 +  60120075 a--c
i Macaca_assamensis.Contig5                              I 2 C 0
s Macaca_cyclopis.k119_18836                                 13978 4 -     26193 atac
i Macaca_cyclopis.k119_18836                             I 1 C 0
s Macaca_fascicularis.k141_814140                            81756 2 -    114318 A--C
i Macaca_fascicularis.k141_814140                        I 1 C 0
s Macaca_fuscata.k119_255327                                  7447 2 -     23192 A--C
i Macaca_fuscata.k119_255327                             I 1 C 0
s Macaca_leonina.k141_3550399                                16911 2 -     29190 a--c
i Macaca_leonina.k141_3550399                            I 1 C 0
s Macaca_maura.k141_2733130                                  25489 2 +     37952 a--c
i Macaca_maura.k141_2733130                              I 1 C 0
s Macaca_mulatta.NC_041758.1                             186840566 4 + 187317192 atac
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25459144 2 -  25927173 a--c
i Macaca_nemestrina.KQ007038.1                           I 1 C 0
s Macaca_nigra.k141_1655396                                  81345 2 +     89720 a--c
i Macaca_nigra.k141_1655396                              I 1 C 0
s Macaca_radiata.k141_3680011                                 8338 2 +     20474 A--C
i Macaca_radiata.k141_3680011                            I 1 C 0
s Macaca_siberu.k141_635500                                   8135 2 -     14993 a--c
i Macaca_siberu.k141_635500                              I 1 C 0
s Macaca_silenus.Contig273                                  330997 2 -    668171 a--c
i Macaca_silenus.Contig273                               I 1 C 0
s Macaca_thibetana.k99_256239                                 6447 2 -     24072 A--C
i Macaca_thibetana.k99_256239                            I 2 C 0
s Macaca_tonkeana.k141_1498238                               27078 2 -     45290 a--c
i Macaca_tonkeana.k141_1498238                           I 1 C 0
s Mandrillus_leucophaeus.scaffold280                      23938661 2 -  24302211 A--C
i Mandrillus_leucophaeus.scaffold280                     I 1 C 0
s Mandrillus_sphinx.Contig270                               352781 2 +    752769 A--C
i Mandrillus_sphinx.Contig270                            I 1 C 0
s Mico_argentatus.k141_1024458                                 395 2 -     20047 A--C
i Mico_argentatus.k141_1024458                           C 0 C 0
s Mico_humeralifer.k141_1346949                                808 2 +      1399 A--C
i Mico_humeralifer.k141_1346949                          C 0 C 0
s Mico_schneideri.k141_916733                                        395 2 +      5107 A--C
i Mico_schneideri.k141_916733                                  C 0 C 0
s Miopithecus_ogouensis.k141_534055                          10339 2 -     28506 A--C
i Miopithecus_ogouensis.k141_534055                      I 1 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190388 1 +    196477 ---G
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 1 C 0
s Nasalis_larvatus.k141_413338                               16364 2 +     21681 A--C
i Nasalis_larvatus.k141_413338                           I 1 C 0
s Nycticebus_bengalensis.LG01                            102595922 2 - 196305487 A--C
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1514628                             1389 2 -      5837 A--C
i Nycticebus_coucang.k141_1514628                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771844 2 + 199412804 A--C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         7177 2 +      8798 A--C
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             699416 2 -   1103335 a--c
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    45336 2 +     80009 a--c
i Pan_paniscus.KQ411613.1                                I 2 C 0
s Pan_troglodytes.CM009242.2                             189144224 2 + 189151597 a--c
i Pan_troglodytes.CM009242.2                             I 13 C 0
s Papio_anubis.CM001495.2                                183444463 2 + 183742232 a--c
i Papio_anubis.CM001495.2                                I 1 C 0
s Papio_cynocephalus.k141_4307930                             8113 2 +     20448 A--C
i Papio_cynocephalus.k141_4307930                        I 1 C 0
s Papio_hamadryas.Contig39                                20564921 2 +  20919399 A--C
i Papio_hamadryas.Contig39                               I 1 C 0
s Papio_kindae.k141_1936966                                   6853 2 +     41871 A--C
i Papio_kindae.k141_1936966                              I 1 C 0
s Papio_papio.k141_802527                                    10146 2 +     27711 A--C
i Papio_papio.k141_802527                                I 1 C 0
s Papio_ursinus.k141_5274964                                  1143 2 -     11374 A--C
i Papio_ursinus.k141_5274964                             I 1 C 0
s Perodicticus_ibeanus.k141_1182643                            194 2 -      3244 A--C
i Perodicticus_ibeanus.k141_1182643                      C 0 C 0
s Perodicticus_potto.k141_1186926                              572 2 +     10374 A--C
i Perodicticus_potto.k141_1186926                        C 0 C 0
s Piliocolobus_badius.k141_1234363                           44860 2 +     62158 A--C
i Piliocolobus_badius.k141_1234363                       I 1 C 0
s Piliocolobus_gordonorum.k141_381342                        39609 2 +     89929 a--c
i Piliocolobus_gordonorum.k141_381342                    I 1 C 0
s Piliocolobus_kirkii.k141_448987                            41023 2 +     51399 A--C
i Piliocolobus_kirkii.k141_448987                        I 1 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14297266 2 -  14605196 a--c
i Piliocolobus_tephrosceles.PDMG02000141.1               I 1 C 0
s Pongo_abelii.CM009266.2                                189132363 2 + 189387572 a--c
i Pongo_abelii.CM009266.2                                I 1 C 0
s Pongo_pygmaeus.ctg66                                     9571970 2 +   9816681 A--C
i Pongo_pygmaeus.ctg66                                   I 1 C 0
s Presbytis_comata.k141_677006                               74549 2 -     81375 a--c
i Presbytis_comata.k141_677006                           I 1 C 0
s Presbytis_mitrata.k141_1087752                              6366 2 +     19060 A--C
i Presbytis_mitrata.k141_1087752                         I 1 C 0
s Pygathrix_cinerea.k141_1153803                             16350 2 -     91421 A--C
i Pygathrix_cinerea.k141_1153803                         I 1 C 0
s Pygathrix_nigripes_b.ctg100                                 7610470 2 +   7812017 A--C
i Pygathrix_nigripes_b.ctg100                               I 1 C 0
s Pygathrix_nigripes_a.k141_215492                             16349 2 -     72585 A--C
i Pygathrix_nigripes_a.k141_215492                         I 1 C 0
s Rhinopithecus_bieti.k119_217274                             8066 2 -     11128 a--c
i Rhinopithecus_bieti.k119_217274                        I 1 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91237415 2 - 195417433 a--c
i Rhinopithecus_roxellana.NC_044550.1                    I 1 C 0
s Rhinopithecus_strykeri.ctg102                            7673077 2 +   7961872 a--c
i Rhinopithecus_strykeri.ctg102                          I 1 C 0
s Saguinus_bicolor.k141_8081                                  2440 2 +     42994 A--C
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                             1137 2 +      2253 A--C
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               1566 2 -      8737 A--C
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                              1219 2 +      2343 A--C
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209476098 2 + 209938924 A--C
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                 542 2 -      7576 A--C
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119952180 2 - 121099817 a--c
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24522 2 +     46362 A--C
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               24617 2 +     45824 A--C
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             41296 2 -     64574 A--C
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4369 2 -     23631 A--C
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 24513 2 -     61129 A--C
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5421857 2 -   5703754 A--C
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          57098 2 -     80660 A--C
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Semnopithecus_entellus.k141_1672505                         1245 2 -     12572 a--c
i Semnopithecus_entellus.k141_1672505                    I 1 C 0
s Semnopithecus_hypoleucos.k141_1615806                      28097 2 +     39453 a--c
i Semnopithecus_hypoleucos.k141_1615806                  I 1 C 0
s Semnopithecus_johnii.k141_670120                            8605 2 +     27826 A--C
i Semnopithecus_johnii.k141_670120                       I 1 C 0
s Semnopithecus_priam.k141_638794                             8139 2 -     19483 a--c
i Semnopithecus_priam.k141_638794                        I 1 C 0
s Semnopithecus_schistaceus.k141_1572284                      1444 2 -     12762 a--c
i Semnopithecus_schistaceus.k141_1572284                 I 1 C 0
s Semnopithecus_vetulus.k141_910252                           1291 2 +     13763 A--C
i Semnopithecus_vetulus.k141_910252                      I 1 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               4883 1 +   1910179 ---T
i Solenodon_paradoxus.SolPar_flattened_line_126          I 1 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73755 1 +    116680 ---G
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 1 C 0
s Theropithecus_gelada.CM009954.1                        186429769 2 + 186847797 a--c
i Theropithecus_gelada.CM009954.1                        I 1 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   7496 1 +      8208 ---C
i Tolypeutes_matacus.TolMat_scaffold_228639              I 1 C 0
s Trachypithecus_auratus.k141_722599                         12190 2 -     20410 a--c
i Trachypithecus_auratus.k141_722599                     I 1 C 0
s Trachypithecus_crepusculus.k141_582567                      1306 2 -     12674 a--c
i Trachypithecus_crepusculus.k141_582567                 I 1 C 0
s Trachypithecus_cristatus.k141_580354                       12297 2 +     19930 a--c
i Trachypithecus_cristatus.k141_580354                   I 1 C 0
s Trachypithecus_francoisi.k141_1412647                       8694 2 -     19997 A--C
i Trachypithecus_francoisi.k141_1412647                  I 1 C 0
s Trachypithecus_geei.k141_277701                            48839 2 -     60166 a--c
i Trachypithecus_geei.k141_277701                        I 1 C 0
s Trachypithecus_germaini.k141_912491                        16301 2 -     27529 A--C
i Trachypithecus_germaini.k141_912491                    I 1 C 0
s Trachypithecus_hatinhensis.k141_143409                     16251 2 -     18194 A--C
i Trachypithecus_hatinhensis.k141_143409                 I 1 C 0
s Trachypithecus_laotum.k141_907409                           9963 2 -     21137 A--C
i Trachypithecus_laotum.k141_907409                      I 1 C 0
s Trachypithecus_leucocephalus.k141_587342                    8664 2 -     10723 A--C
i Trachypithecus_leucocephalus.k141_587342               I 1 C 0
s Trachypithecus_melamera.k141_434728                         7840 2 +      9834 a--c
i Trachypithecus_melamera.k141_434728                    I 1 C 0
s Trachypithecus_obscurus.k141_190785                        26163 2 +     32220 a--c
i Trachypithecus_obscurus.k141_190785                    I 1 C 0
s Trachypithecus_phayrei.ctg124                            5940259 2 +   6242583 a--c
i Trachypithecus_phayrei.ctg124                          I 1 C 0
s Trachypithecus_pileatus.k141_2007326                        9512 2 +     20839 a--c
i Trachypithecus_pileatus.k141_2007326                   I 1 C 0
s Tupaia_chinensis.KB320699.1                              2156922 1 +   4065304 ---C
i Tupaia_chinensis.KB320699.1                            I 7 C 0
s Tupaia_tana.TupTan_flattened_line_97126                    10369 1 -     10553 ---C
i Tupaia_tana.TupTan_flattened_line_97126                I 7 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Mus_pahari.LT608297.1                                   31356106 6 -  89631738 I
e Mus_spretus.CM004101.1                                  90753509 6 - 130317789 I
e Mus_musculus.chr8                                       87651448 6 - 129401213 I
e Mus_caroli.LT608237.1                                   84362463 6 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Zapus_hudsonius.ZapHud_scaffold_11398                      15983 0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Xerus_inauris.XerIna_scaffold_2302                          2223 6 +    224448 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 11932 474 -     43706 I
e Vicugna_pacos.KN270157.1                                 5372917 0 -   5488506 C
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851544 0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   54430 1 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15739033 3 +  33153633 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_40725                     765 1 +     27266 I
e Tonatia_saurophila.TonSau_scaffold_294                     82340 13 +    610378 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              106514 2 +    114563 I
e Tarsius_wallacei.k141_254427                                1877 3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080 3 +     70052 I
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                11945 12 +     41958 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6812233 23 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629              19464 1 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             32148 1 +     97271 I
e Spermophilus_dauricus.KZ294078.1                         1955221 6 -   3870691 I
e Sorex_araneus.JH798187.1                                13652127 0 -  18376816 C
e Sigmodon_hispidus.SigHis_scaffold_42075                     1386 6 -     30804 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    154334 1 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                88963 12 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        368130 12 -   3329780 I
e Rattus_norvegicus.chr16                                 53571697 6 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  6410 21 +     55207 I
e Puma_concolor.QAVW01001104.1                            20275445 1 -  38429054 I
e Pteropus_vampyrus.KN534172.1                                7968 12 -      8028 I
e Pteropus_alecto.KB030862.1                              22977915 12 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         41674 1 +     42204 I
e Pteronotus_parnellii.KE909381.1                            16281 9 -     21811 I
e Psammomys_obesus.NESX01036370.1                            11491 6 -     21651 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35528 1 +     35617 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             2901 7 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9835 1 +     63832 I
e Petromus_typicus.PetTyp_scaffold_42190                     29222 2 -     29689 I
e Peromyscus_maniculatus.KI615324.1                       18195865 6 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13779 1 -     78924 I
e Pantholops_hodgsonii.KE114653.1                          1265831 21 -   2937107 I
e Panthera_tigris.KE722367.1                               4722373 1 -   8748460 I
e Panthera_pardus.KV860321.1                                265493 1 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  152284 1 +    230217 I
e Ovis_canadensis.OviCan_scaffold_2572                      174913 21 -    191736 I
e Ovis_aries.CM001607.2                                   17586936 21 +  44047080 I
e Otocyon_megalotis.JAEUCK010005147.1                       463484 482 -    559221 I
e Oryctolagus_cuniculus.CM000791.1                        67148785 6 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Orcinus_orca.KB316932.1                                  2782790 1 -  10937097 I
e Onychomys_torridus.OnyTor_scaffold_2986                    81289 6 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   26251 6 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77668 21 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              507816 1 -   2017862 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Ochotona_princeps.JH802162.1                             1365329 6 +   3988456 I
e Nyctereutes_procyonoides.CAJHUB010000658.1               9150535 341 -   9404916 I
e Noctilio_leporinus.NocLep_scaffold_251                    758990 17 +    783361 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866881 1 +   7148211 I
e Neomonachus_schauinslandi.NINY01007730.1                20308671 1 +  31847680 I
e Nannospalax_galili.KL204047.1                            2035627 0 -   3037898 C
e Myotis_myotis.MyoMyo_scaffold_281845                        1115 11 +      1835 I
e Myotis_lucifugus.GL429869.1                              3904963 11 -   4330536 I
e Myotis_davidii.KB100139.1                                1588866 11 -   6019432 I
e Myotis_brandtii.KE162005.1                                281611 11 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     72300 2 -     80779 I
e Mustela_putorius.JH418006.1                               302867 1 -  14710649 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           7969 11 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398 7 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1836 21 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 142786 15 -    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27912 1 -    437263 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7078 1 -      8324 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             35221 4 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1851541 4 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11261600 6 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                16995 13 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    4402 1 +     10310 I
e Mesocricetus_auratus.KB708134.1                         12183301 6 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 33845 6 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365             11474 1 +     13704 I
e Megaderma_lyra.MegLyr_scaffold_4542                        14475 12 -    207569 I
e Marmota_marmota.CZRN01000018.1                          33104362 6 -  40650429 I
e Manis_pentadactyla.KN006162.1                              51381 1 -    317179 I
e Manis_javanica.JSZB01003497.1                              19395 1 +    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_8222                 91773 12 +     94391 I
e Lycaon_pictus.CM007581.1                                17956469 472 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268797 1 -    662738 I
e Lepus_americanus.LepAme_scaffold_107385                     7884 6 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044211 1 +   3914936 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Lasiurus_borealis.LasBor_scaffold_32767                    17527 78 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_192630                3107 1 -      3359 I
e Jaculus_jaculus.JH725527.1                               8278247 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23736 1 +     23964 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7522075 6 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      84190 6 +    135385 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  46155 1 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_101188                214 12 +      9903 I
e Hipposideros_armiger.JXIK01000431.1                       111644 12 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20663309 2 +  22651954 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 18961 21 +     36099 I
e Helogale_parvula.HelPar_flattened_line_2585               243459 1 +    327341 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Graphiurus_murinus.GraMur_scaffold_10447                   33744 11 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            32063 0 +     49224 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609755 21 -    660261 I
e Fukomys_damarensis.KN121974.1                             851538 2 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                 10676 1 -     36744 I
e Felis_catus_fca126.CM031415.1                           20196922 1 + 205367284 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Eubalaena_japonica.EubJap_flattened_line_31514             26146 1 -     44125 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           12193 1 +    133382 I
e Erinaceus_europaeus.JH835339.1                           3329343 1 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2146873 12 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16330760 1 -  41312741 I
e Ellobius_talpinus.LOJH01081419.1                            1523 6 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          21617 6 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311790 21 +    607251 I
e Eidolon_helvum.KE759718.1                                  11681 12 +     11740 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    37488 2 +     67921 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8631244 13 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812529 1 +  35494412 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  36984 2 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838204 6 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             29614 1 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_37019               4057 0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11668605 6 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 51160 6 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           1614 12 +     23735 I
e Condylura_cristata.JH655891.1                           17549176 1 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1254015 2 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Cephalopachus_bancanus.k141_1423433                         6085 3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     94669 29 +    217609 I
e Castor_canadensis.CasCan_scaffold_2074                    138427 6 +    179628 I
e Carollia_perspicillata.CarPer_scaffold_92756                6247 4 -     11696 I
e Carlito_syrichta.NW_007259797.1                           156587 3 -    496798 I
e Capromys_pilorides.CapPil_scaffold_65020                    2117 2 -     12242 I
e Capra_hircus.CM004588.1                                 18061476 21 -  44709034 I
e Capra_aegagrus.CM003241.1                               18830756 21 +  46296322 I
e Canis_lupus_orion.HG994398.1                            18501526 477 +  63665305 I
e Canis_lupus_familiaris.chr16                            17960229 472 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9035753 477 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     1058 472 -     43241 I
e CanFam4.chr16                                           17800310 477 -  60362399 I
e Camelus_ferus.KB017975.1                                  404170 0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2335871 0 -   7040546 C
e Camelus_bactrianus.KN276810.1                           10003395 0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2820128 21 +   4408762 I
e Bos_taurus.CM000184.6                                   18200496 21 - 114055384 I
e Bos_mutus.JH880303.1                                     1126378 21 -   1948126 I
e Bos_indicus.CM003028.1                                  18363522 21 - 116941312 I
e Bison_bison.KN261452.1                                    200637 21 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    27560 21 +     34529 I
e Balaenoptera_bonaerensis.DF707048.1                         3346 1 -     18090 I
e Balaenoptera_acutorostrata.KI537508.1                   15192881 1 +  23207421 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  5878 13 +     43469 I
e Aplodontia_rufa.AprRuf_scaffold_68852                      13748 6 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             99127 21 -    100397 I
e Anoura_caudifer.AnoCau_scaffold_1412                      186495 13 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676638 21 -   2318259 I
e Allactaga_bullata.AllBul_scaffold_9566                     75585 0 -     89534 C
e Ailurus_fulgens.LNAC01001112.1                             80803 1 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9511730 1 -  29979442 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     71882 6 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           828437 1 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       7993  80 +     62944 ac--atca-a-------t--a--ta-tgtagaaa--t------a--tg----taggt---t---------att--------------a----a----a----------------t-----------------------a---------------------tat------a-t--tt--a----c-----attatatgtgaagcagcatcattgtcagtggtaa
s Acinonyx_jubatus.LLWD01001279.1                           828438  28 -   1699592 AG--GACA-a-------t--a--ta-tgcagtaa--t------a--tg----gagat----------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Acinonyx_jubatus.LLWD01001279.1                        I 1 I 23
s Acomys_cahirinus.AcoCah_scaffold_12655                     71888  43 +     87051 -------A-A-------A--G--TA-TATAGACA--A------A--TG----CATAT---T---------GTT--------------A----G----G----------------T-----------------------A---------------------CAC------A-T--TT--A----T-----AT--------------------------------
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 6 I 20
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511731  47 -  29979442 AA--AACA-A-------T--A--TA--GCAGAAA--T------A--Ta----aagat---t---------att--------------a----a----a----------------t-----------------------a---------------------tat------a-t--tt--g----t-----at--------------------------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 1 I 13
s Ailurus_fulgens.LNAC01001112.1                             80804  48 -    347723 AA--AACA-A-------T--A--TA-TGCAGGAA--T------A--TG----gagat---t---------att--------------a----a----a----------------t-----------------------a---------------------tat------a-t--tt--g----t-----at--------------------------------
i Ailurus_fulgens.LNAC01001112.1                         I 1 I 13
s Allactaga_bullata.AllBul_scaffold_9566                     75585  10 -     89534 AC--AACA-A-------T--A--T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 13
s Allenopithecus_nigroviridis.k141_3361533                   15908  80 -     52922 ac--atca-a-------t--a--ta-tgtataaa--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TGT------A-T--TT--A----C-----ATTATGTGtgaagcaacatcattgtcagtggtaa
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15822  80 -     28001 AC--ATCA-A-------T--A--TA-TGTATAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TGT------A-T--TT--C----C-----ATTATGTGtgaagcaacgtctttgtcagtggtaa
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          6322  80 -     18505 AC--ATCA-A-------T--A--TA-TGTATAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TGT------A-T--TT--A----C-----ATTATGTGtgaagcaacgtctttgtcagtggtaa
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           7174  80 -     12518 AC--ATCA-A-------T--A--TA-TGTATAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TGT------A-T--TT--A----C-----ATTATGTGtgaagcaacgtctttgtcagtggtaa
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              8735  77 +     51355 AC--ATCA-G-------T--A--TG-TGTAGGAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------CAT------A-T--TT--A----C-----ACTGTGTGTGATGCAGcatt---gtcaggggtaa
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                1844  77 -     36483 AC--ATCA-G-------C--A--TG-TGTAGGAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------CAT------A-T--TT--A----C-----ACTGTGTGTGATGCAGcatc---atcaggggtaa
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              12296  77 +     28687 AC--ATCA-G-------T--A--TG-TGTAGGAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TAT------A-T--TT--A----C-----ACTGTGTGTAATGCAGcatc---gtcaggggtaa
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                  809  77 +     27940 AC--ATCA-G-------T--A--TG-TGTAGGAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------CAT------A-T--TT--A----C-----ACTGTGTGTGATGCAGcatt---gtcaggggtaa
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            1853  77 -      9457 AC--ATCA-G-------T--A--CG-TGTAGGAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------CAT------A-T--TT--A----C-----ACTGTGTGTGATGCAGcatc---gtcaggggtaa
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                              809  77 +     30492 AC--ATCA-G-------T--A--CG-TGTAGGAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------CAT------A-T--TT--A----C-----ACTGTGTGTGATGCAGcatc---gtcaggggtaa
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              4804  77 +     47717 AC--ATCA-G-------T--A--TG-TGTAGGAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------CAT------A-T--TT--A----C-----ATTGTGTGTAATGCAGcatt---gtcaggggtaa
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              1536  77 +      5663 AC--ATCA-G-------T--A--TG-TGTAGGAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------CAT------A-T--TT--A----C-----ACTGTGTGTGATGCAGcatt---gtcaggggtaa
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             15988  77 +     50774 AC--ATCA-G-------T--A--TG-TGTAGGAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------CAT------A-T--TT--A----C-----ACTGTGTGTGATGCAGcatt---gtcaggggtaa
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          676659  21 -   2318259 --------------------------------------------------------T---T---------ATT--------------A----A----A----------------C-----------------------A---------------------Cac------a-t--tt--g----t-----at--------------------------------
i Ammotragus_lervia.NIVO01071767.1                       I 21 I 15
s Anoura_caudifer.AnoCau_scaffold_1412                      186508  33 +    412891 AC--TACA-A-------T--A--TA-TGCAGGAA--T------A--TG----GAGAT---T---------ACT--------------A---------------------------------------------------------------------------------------------------------------------------------------
i Anoura_caudifer.AnoCau_scaffold_1412                   I 13 I 33
s Antilocapra_americana.AntAmePen_scaffold_12469             99148  21 -    100397 --------------------------------------------------------T---T---------ATT--------------C----A----A----------------C-----------------------A---------------------CAC------A-T--GT--A----T-----AT--------------------------------
i Antilocapra_americana.AntAmePen_scaffold_12469         I 21 I 11
s Aotus_azarae.k141_3104676                                  16979  77 -     33861 AC--ATCA-A-------T--A--TG-TGTAGGGA--T------A--TG----TAGAT---T---------GTT--------------A----A----A----------------T-----------------------A---------------------TAT------A-T--TT--A----C-----ATTGTGTGTGATGCAGCATC---GTCAGGGGTAA
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            16976  77 -     34016 AC--ATCA-A-------T--A--TG-TGTAGGGA--T------A--TG----TAGGT---T---------GTT--------------A----A----A----------------T-----------------------A---------------------TAT------A-T--TT--A----C-----ATTGTGTGTGATGCAGcatc---gtcaggggtaa
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299403  77 -   5030052 ac--atca-A-------T--A--TG-TGTAGGGA--T------A--TG----TAggt---t---------gtt--------------a----a----a----------------t-----------------------a---------------------tat------a-t--tt--a----c-----attgtgTGTGATGCAGCATC---GTCAGGGGTAA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             17012  77 -     34685 AC--ATCA-A-------T--A--TG-TGTAGGGA--T------A--TG----TAGGT---T---------GTT--------------A----A----A----------------T-----------------------A---------------------TAT------A-T--TT--A----C-----ATTGTGTGTGACGCAGCATC---GTCATGGGTAA
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               30137  77 -     47192 AC--ATCA-A-------T--A--TG-TGTAGGGA--T------A--TG----TAGGT---T---------GTT--------------A----A----A----------------T-----------------------A---------------------TAT------A-T--TT--A----C-----ATTGTGTGTGATGCAGcatc---gtctggggtaa
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13754  69 +     20879 AC--ATCA-G-------T--A--TG-TACAGGCA--T------A--TG----TAGAT---C---------ATT--------------A----A----G----------------T-----------------------ATGTACTTATATTGCATATCTACAT------G-T--TC--A----T-----AT--------------------------------
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 6 I 11
s Arctocebus_calabarensis.k141_1648548                         515  23 +      5281 ACGTGTCA-A-------T--A--TATTGAAGAAT--G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Arctocebus_calabarensis.k141_1648548                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5891  33 +     43469 AC--CACA-A-------T--A--TA-TGAAGGAA--T------A--TG----GAAAT---T---------ACT--------------A---------------------------------------------------------------------------------------------------------------------------------------
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 13 I 48
s Balaenoptera_acutorostrata.KI537508.1                   15192882  48 +  23207421 AC--AACA-A-------C--A--TA-TGCAGGAA--T------G--TG----Gatat---t---------att--------------a----a----a----------------t-----------------------a---------------------cat------a-t--tt--a----t-----at--------------------------------
i Balaenoptera_acutorostrata.KI537508.1                  I 1 I 18
s Balaenoptera_bonaerensis.DF707048.1                         3347  48 -     18090 AC--AACA-A-------C--A--TA-TGCAGGAA--T------G--TG----Gatat---t---------att--------------a----a----a----------------t-----------------------a---------------------cat------a-t--tt--a----t-----at--------------------------------
i Balaenoptera_bonaerensis.DF707048.1                    I 1 I 18
s Beatragus_hunteri.BeaHun_scaffold_50177                    27581  21 +     34529 --------------------------------------------------------T---T---------ATT--------------A----A----A----------------C-----------------------A---------------------CAG------A-T--TT--A----T-----AT--------------------------------
i Beatragus_hunteri.BeaHun_scaffold_50177                I 21 I 14
s Bison_bison.KN261452.1                                    200658  21 -    288883 --------------------------------------------------------T---T---------ATT--------------A----A----A----------------C-----------------------a---------------------cac------a-t--tt--a----t-----at--------------------------------
i Bison_bison.KN261452.1                                 I 21 I 13
s Bos_indicus.CM003028.1                                  18363543  21 - 116941312 --------------------------------------------------------T---T---------ATT--------------A----A----A----------------C-----------------------a---------------------cac------a-t--tt--a----t-----at--------------------------------
i Bos_indicus.CM003028.1                                 I 21 n 21
s Bos_mutus.JH880303.1                                     1126399  21 -   1948126 --------------------------------------------------------T---T---------ATT--------------A----A----A----------------C-----------------------a---------------------cac------a-t--tt--a----t-----at--------------------------------
i Bos_mutus.JH880303.1                                   I 21 I 17
s Bos_taurus.CM000184.6                                   18200517  21 - 114055384 --------------------------------------------------------T---T---------ATT--------------A----A----A----------------C-----------------------a---------------------cac------a-t--tt--a----t-----at--------------------------------
i Bos_taurus.CM000184.6                                  I 21 n 21
s Bubalus_bubalis.KI419123.1                               2820149  21 +   4408762 --------------------------------------------------------T---T---------ATT--------------A----A----A----------------C-----------------------a---------------------cac------a-t--tt--a----t-----at--------------------------------
i Bubalus_bubalis.KI419123.1                             I 21 I 21
s Callibella_humilis.k141_10318                                760  75 +     27907 AC--ATCA-A-------C--A--TA-TGTAGGGA--C------A--TG----TAGGT---T---------ATT--------------A----A----A----------------C-----------------------A---------------------TAC------A-T--TT--A----C-----ACTGTGT--GATGCAGcatt---gccaggggtaa
i Callibella_humilis.k141_10318                          C 0 C 0
s Callimico_goeldii.k141_737284                                398  77 -     31217 AC--ATCA-A-------C--A--TA-TGTAGGGA--T------G--TG----TAGGT---T---------ATT--------------A----A----A----------------C-----------------------A---------------------CAC------A-T--TT--A----C-----ATTGTGTGTGATGCAGcatt---gccaggggtaa
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                              694  77 +      5377 AC--ATCA-A-------C--A--TA-TGTAGGGA--C------A--TG----TAGGT---T---------ATT--------------C----A----A----------------C-----------------------A---------------------TAC------A-T--TT--A----C-----ACTGTGTGTGATGCAGcatt---gccaggggtaa
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592555  77 - 189096842 AC--ATCA-A-------C--A--TA-TGTAGGGA--C------A--TG----TAGGT---T---------ATT--------------C----A----A----------------C-----------------------A---------------------TAC------A-T--TT--A----C-----ACTGTGTGTGATGCAGCATT---GCCAGGGGTAA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1369  77 -     12329 AC--ATCA-A-------C--A--TA-TGTAGGGA--C------A--TG----TAGGT---T---------ATT--------------C----A----A----------------C-----------------------A---------------------TAC------A-T--TT--A----C-----ACTGTGTGTGATGCAGcatt---gccaggggtaa
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Camelus_bactrianus.KN276810.1                           10003395  52 -  17673402 ac--tacA-A-------C--A--TA-TGCAGGAA--T------G--TG----GAGag---t---------att--------------a----a----a----------------t-----------------------a---------------------tgt------a-t--tt--a----tattata---------------------------------
i Camelus_bactrianus.KN276810.1                          C 0 I 16
s Camelus_dromedarius.KN272107.1                           2335871  52 -   7040546 ac--CACA-A-------C--A--TA-TGCAGGAA--T------G--TG----GAgag---t---------att--------------a----a----a----------------t-----------------------a---------------------tgt------a-t--tt--a----tattata---------------------------------
i Camelus_dromedarius.KN272107.1                         C 0 I 16
s Camelus_ferus.KB017975.1                                  404170  52 -   1652518 ac--cacA-A-------C--A--TA-TGCAGGAA--T------A--TG----GAGag---t---------att--------------a----a----a----------------t-----------------------a---------------------tgt------a-t--tt--a----tattata---------------------------------
i Camelus_ferus.KB017975.1                               C 0 I 16
s CanFam4.chr16                                           17800787  16 -  60362399 ---------------------------------------------------------------------------------------G----A----A----------------T-----------------------A---------------------TAT------A-T--AT--A----T-----AT--------------------------------
i CanFam4.chr16                                          I 477 I 952
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     1530  16 -     43241 ---------------------------------------------------------------------------------------G----A----A----------------T-----------------------A---------------------TAT------A-T--AT--A----T-----AT--------------------------------
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 472 I 950
s Canis_lupus_dingo.QKWQ01000480.1                         9036230  16 -   9314153 ---------------------------------------------------------------------------------------g----a----a----------------t-----------------------a---------------------tat------a-t--at--a----t-----at--------------------------------
i Canis_lupus_dingo.QKWQ01000480.1                       I 477 I 952
s Canis_lupus_familiaris.chr16                            17960701  16 -  59632846 ---------------------------------------------------------------------------------------g----a----a----------------t-----------------------a---------------------tat------a-t--at--a----t-----at--------------------------------
i Canis_lupus_familiaris.chr16                           I 472 I 950
s Canis_lupus_orion.HG994398.1                            18502003  16 +  63665305 ---------------------------------------------------------------------------------------g----a----a----------------t-----------------------a---------------------tat------a-t--at--a----t-----at--------------------------------
i Canis_lupus_orion.HG994398.1                           I 477 I 950
s Capra_aegagrus.CM003241.1                               18830777  21 +  46296322 --------------------------------------------------------T---T---------ATT--------------A----A----A----------------C-----------------------A---------------------Cac------a-t--ct--a----t-----at--------------------------------
i Capra_aegagrus.CM003241.1                              I 21 I 11
s Capra_hircus.CM004588.1                                 18061497  21 -  44709034 --------------------------------------------------------T---T---------ATT--------------A----A----A----------------C-----------------------A---------------------Cac------a-t--ct--a----t-----at--------------------------------
i Capra_hircus.CM004588.1                                I 21 I 11
s Capromys_pilorides.CapPil_scaffold_65020                    2119  17 -     12242 ------------------------------------------------------------------------A--------------A----G----A----------------T-----------------------A---------------------TGC------A-T--TT--G----T-----AT--------------------------------
i Capromys_pilorides.CapPil_scaffold_65020               I 2 I 10
s Carollia_perspicillata.CarPer_scaffold_92756                6251  31 -     11696 -C--CACA-A-------G--A--TA-TGCAGGAA--T------A--TG----GAAAC---T---------ACT------------------------------------------------------------------------------------------------------------------------------------------------------
i Carollia_perspicillata.CarPer_scaffold_92756           I 4 I 30
s Castor_canadensis.CasCan_scaffold_2074                    138433  37 +    179628 AC--CTCA-A-------T--A--TA-CGCAAGCA--T------A--TG----CAGAT---T---------GTT--------------A----A----G----------------T-----------------------A------------------------------------------------------------------------------------
i Castor_canadensis.CasCan_scaffold_2074                 I 6 I 15
s Catagonus_wagneri.CatWag_scaffold_2839                     94698  42 +    217609 ------------------------A-TGCAGAAA--C------G--CA----AAGAT---T---------ATA--------------A----A----A----------------T-----------------------G---------------------TAT------A-C--TT--ANNNNT-----AC--------------------------------
i Catagonus_wagneri.CatWag_scaffold_2839                 I 29 I 9
s Cebuella_niveiventris.k141_280505                          14470  75 +     15466 AC--ATCA-A-------C--A--TA-TGTAGGGG--C------A--TG----TAGGT---T---------ATT--------------A----A----A----------------C-----------------------A---------------------TAC------A-T--TT--A----C-----ACTGTGT--GATGCAGCATT---GCCAGGGGTAA
i Cebuella_niveiventris.k141_280505                      C 0 C 0
s Cebuella_pygmaea.k141_793006                                 397  75 -     15088 AC--ATCA-A-------C--A--TA-TGTAGGGA--C------A--TG----TAGGT---T---------ATT--------------A----A----A----------------C-----------------------A---------------------TAC------A-T--TT--A----C-----ACTGTGT--GATGCAGcatt---gccaggggtaa
i Cebuella_pygmaea.k141_793006                           C 0 C 0
s Cebus_albifrons.Contig27                                25653905  37 +  26074798 A----TCA-A-------T--A--TA-TGGAGGGA--T------A--TG----TAGGT---A---------ATT--------------A----A----A----------------T-----------------------A---------------------TA-------------------------------------------------------------
i Cebus_albifrons.Contig27                               C 0 I 33
s Cebus_olivaceus.k141_1764483                                1843  37 +     28840 A----TCA-A-------T--A--TA-TGGAGGGA--T------A--TG----TAGGT---A---------ATT--------------A----A----A----------------T-----------------------A---------------------TA-------------------------------------------------------------
i Cebus_olivaceus.k141_1764483                           C 0 I 33
s Cebus_unicolor.k141_1837183                                 1572  37 +     14051 A----TCA-A-------T--A--TA-TGGAGGGA--T------A--TG----TAGGT---A---------ATT--------------A----A----A----------------T-----------------------A---------------------TA-------------------------------------------------------------
i Cebus_unicolor.k141_1837183                            C 0 I 33
s Cercocebus_atys.KQ010504.1                               4476839  80 +   4669795 ac--atca-a-------t--a--ta-tgtagaaa--t------a--tg----taggt---t---------att--------------a----a----a----------------t-----------------------a---------------------tgt------a-t--tt--a----c-----attatGTGtgaagcaacatcattgtcagtggtaa
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        1341  80 +     17872 AC--ATCA-A-------T--A--TA-TGTAGAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TGT------A-T--TT--A----C-----ATTATGTGtgaagcaacatcattgtcagtggtaa
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           1930  80 -     14043 AC--ATCA-A-------T--A--TA-TGTAGAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TGT------A-T--TT--A----C-----ATTATGTGtgaagcaacatcattgtcagtggtaa
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          10035  80 +     27781 AC--ATCA-A-------T--A--TA-TGTAGAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TGT------A-T--TT--A----C-----ATTATGTGtgaagcaacatcattgtcagtggtaa
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        10191  80 -     20310 AC--ATCA-A-------T--A--TA-TGTATAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TGT------A-T--TT--A----C-----ATTATGTGtgaagcaacgtctttgtcagtggtaa
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          13171  80 +     29689 AC--ATCA-A-------T--A--TA-TGTATAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TGT------A-T--TT--A----C-----ATTATGTGtgaagcaatgtctttgtcagtggtaa
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            7921  80 -     20078 AC--ATCA-A-------T--A--TA-TGTATAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TGT------A-T--TT--A----C-----ATTATGTGtgaagcaacgtctttgtcagtggtaa
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          15843  80 -     27936 AC--ATCA-A-------T--A--TA-TACATAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----T----------------T-----------------------A---------------------TGT------A-T--TT--A----C-----ATTATGTGtgaagcaacgtctttgtcagtggtaa
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            4709  80 -     17152 AC--ATCA-A-------T--A--TA-TGTATAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----T----------------T-----------------------A---------------------TAT------A-T--TT--A----C-----ATTATGTGtgaagcaacgtctttgtcagtggtaa
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38818250  80 +  39242232 AC--ATCA-A-------T--A--TA-TGTATAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TGT------A-T--TT--A----C-----ATTATGTGtgaagcaacgtctttgtcagtggtaa
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21223943  80 -  21565898 AC--ATCA-A-------T--A--TA-TGTATAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----T----------------T-----------------------A---------------------TGT------A-T--TT--A----C-----ATTATGTGtgaagcaacgtctttgtcagtggtaa
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       41062  80 -     53127 AC--ATCA-A-------T--A--TA-TGTATAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----T----------------T-----------------------A---------------------TGT------A-T--TT--A----C-----ATTATGTGtgaagcaacgtctttgtcagtagtaa
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        1309  80 +     13442 AC--ATCA-A-------T--A--TA-TGTATAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----T----------------T-----------------------A---------------------TGT------A-T--TT--A----C-----ATTATGTGtgaagcaacatctttgtcagtggtaa
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15895  43 -     27947 ----------------------------------------------------------------------------------------------------------------------------------------------------------------TGT------A-T--TT--A----C-----ATTATGTGtgaagcaacgtctttgtcagtggtaa
i Cercopithecus_petaurista.k141_807961                   I 33 C 0
s Cercopithecus_pogonias.k141_822820                         15838  42 +     17596 AC--ATCA-A-------T--A--TA-TGTATAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----T----------------T-----------------------A---------------------TGT------A-T---------------------------------------------------
i Cercopithecus_pogonias.k141_822820                     C 0 I 33
s Cercopithecus_roloway.k141_2581234                          1889  80 +     14005 AC--ATCA-A-------T--A--TA-TGTATAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----T----------------T-----------------------A---------------------TGT------A-T--TT--A----C-----ATTATGTGtgaagcaacgtctttgtcagtggtaa
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1601  86 -      8501 AC--ATCA-C-------T--G--TA-TGCGGGGA--TTT-CAAT--TATGCTTACAT---A---------ACA--------------G----C----A----------------TAGGTAGGT-ATT-ACATGCACGCA---------------------CATGTGTGTA-A--TCACA----T-----GT--------------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 I 14
s Chinchilla_lanigera.JH722012.1                           1254017  48 +   2543920 CC--ATCA-G-------T--A--GA-AAGGGTCA--T------G--AG----TAGAT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TGC------A-T--TT--C----T-----AT--------------------------------
i Chinchilla_lanigera.JH722012.1                         I 2 I 10
s Chiropotes_albinasus.k141_2206961                           2177  76 -     15524 AC--ATCA-A-------T--A--TG-TGTAGGGA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------C-----------------------A---------------------CAC------G-T--TT--A----C-----ATTGTGTGGGGTGCAGCATC----tcaggggtac
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18429828  80 -  18827391 AC--ATCA-A-------T--A--TA-TGTATAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TGT------A-T--TT--C----C-----ATTATGTGtgaagcaacgtctttgtcagtggtaa
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       16262  80 -     50209 AC--ATCA-A-------T--A--TA-TGTATAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TGT------A-T--TT--A----C-----ATTATGTGtgaagcaacgtctttgtcagtggtaa
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135423263  80 + 135778131 ac--atca-a-------t--a--ta-tgtataaa--t------a--tg----taggt---t---------att--------------a----a----a----------------t-----------------------a---------------------tgt------a-t--tt--a----c-----attatGTGtgaagcaacgtctttgtcagtggtaa
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1911747  80 +   2368649 ac--atca-a-------c--a--ta-tgtagaaa--t------a--tg----taggt---t---------att--------------a----a----a----------------t-----------------------a---------------------cat------a-t--tt--a----c-----attatGTGtgaagcaacgtcattgtcagtggtaa
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199949995  80 + 200372422 AC--ATCA-A-------C--A--TA-TGTAGAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------CAT------A-T--TT--A----C-----ATTATGTGtgaagcaacgtcactgtcagtggtaa
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              38275  80 +     84244 AC--ATCA-A-------C--A--TA-TGTAGAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------CAT------A-T--TT--A----C-----ATTATGTGtgaagcaacgtcattgtcagtggtaa
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549177  47 -  53390261 AC--AACA-A-------A--A--TT-TGCAGGAA--T------C--TG----GGCAT---a---------cgt--------------a----a----a----------------t-----------------------a---------------------ttt------a-t--t---t----t-----ta--------------------------------
i Condylura_cristata.JH655891.1                          I 1 I 15
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1626  46 +     23735 AC--CTCA-A-------C--A--TA-TGCAGAAA--T------A--CA----GAG-----T---------ATG--------------A----A----A----------------T-----------------------A---------------------TAT------A-T--TC--A----T-----AT--------------------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      I 12 I 18
s Cricetomys_gambianus.CriGam_scaffold_18520                 51166  43 +     63868 -------A-A-------T--G--TA-TATAGGTA--A------A--AA----CAGAT---T---------ATG--------------A----A----A----------------T-----------------------A---------------------TAC------A-T--TT--A----C-----AT--------------------------------
i Cricetomys_gambianus.CriGam_scaffold_18520             I 6 I 20
s Cricetulus_griseus.LT883664.1                           11668611  38 + 224834208 -------A-A-------T--G--TA-TATTGAGA--A------A--TG----CAGAT---T---------ATT--------------A----G----A----------------C-----------------------A---------------------CAC------A-T---T-----------------------------------------------
i Cricetulus_griseus.LT883664.1                          I 6 I 21
s Crocidura_indochinensis.CroInd_scaffold_37019               4057  63 -     19598 -----ATA-A-------T--A--TA-GTTAATATATC------ATTTA----TATAT---T---------GTT--------------ATATTA----AATACATATATTGTTTGT-----------------------G-----------------------A------T-A-AT------------------------------------------------
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 I 20
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29615  40 -     87169 AA--GACA-A-------T--A--TA-TGCAGGAA--T------A--TG----GATAT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TAT------------------------------------------------------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 1 I 20
s Ctenodactylus_gundi.CteGun_scaffold_65                    838210  48 +   1526836 AC--ATCA-G-------T--G--TA-TACAGACC--T------A--TA----TAGCT---T---------ATT--------------A----A----G----------------C-----------------------A---------------------TGT------A-T--TT--A----T-----AT--------------------------------
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 6 I 8
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  36986  21 +     51376 ------------------------------------------------------------------------A--------------A----GGGGCA----------------T-----------------------G---------------------TGC------A-T--TT--G----T-----AT--------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 2 I 10
s Dasypus_novemcinctus.JH564415.1                            64624  84 +   2246927 GC--ATCA-C-------C--A--TA-TAAAGGGA--TTTT-ACC--TGTGCTTACGTATCA---------ACA--------------G----C----A----------------GAGGTAGATTATT-ACACGCACACT---------------------CAT------A-T--TCACA----T-----TT--------------------------------
i Dasypus_novemcinctus.JH564415.1                        C 0 I 14
s Delphinapterus_leucas.KZ290073.1                        16812530  47 +  35494412 AC--AACA-A-------C--A--TA-TGCAGGAA--T------G--TG----GAgat---t---------att--------------a----a----a----------------t-----------------------a---------------------cat------a-t---t--a----t-----at--------------------------------
i Delphinapterus_leucas.KZ290073.1                       I 1 I 18
s Desmodus_rotundus.KZ672289.1                             8631257  32 +  20541912 ac--caCA-A-------T--A--TA-TGCAGG-A--T------A--CG----GAGAT---t---------act--------------a---------------------------------------------------------------------------------------------------------------------------------------
i Desmodus_rotundus.KZ672289.1                           I 13 I 33
s Dinomys_branickii.DinBra_scaffold_21862                    37490  48 +     67921 AC--ACCA-G-------T--A--TA-AAGGTGCA--T------G--GG----TAGAT---T---------ATT--------------A----A----A----------------C-----------------------A---------------------TGC------A-T--TT--G----T-----AT--------------------------------
i Dinomys_branickii.DinBra_scaffold_21862                I 2 I 10
s Eidolon_helvum.KE759718.1                                  11693  47 +     11740 GC--CACA-A-------T--A--CA-TGCAGGAA--T------A--TG----Gaggt---t---------att--------------a----a----a----------------t-----------------------a---------------------tat------a-t--tt--t----t-----a---------------------------------
i Eidolon_helvum.KE759718.1                              I 12 N 0
s Elaphurus_davidianus.JRFZ01104969.1                       311811  21 +    607251 --------------------------------------------------------T---T---------ATT--------------A----A----A----------------C-----------------------a---------------------cac------a-t--tt--a----t-----at--------------------------------
i Elaphurus_davidianus.JRFZ01104969.1                    I 21 I 13
s Ellobius_lutescens.LOEQ01008920.1                          21623  42 -    110024 -------A-A-------T--G--TA-TATTGACA--A------A--TA----CGGGT---T---------AAT--------------A----A----A----------------T-----------------------A---------------------CAC------A-T---T--A----C-----AT--------------------------------
i Ellobius_lutescens.LOEQ01008920.1                      I 6 I 20
s Ellobius_talpinus.LOJH01081419.1                            1529  42 +      8657 -------a-a-------t--g--ta-tattgaCA--A------A--TA----CGGGT---T---------AAT--------------A----A----A----------------T-----------------------A---------------------CAC------A-T---T--A----C-----AT--------------------------------
i Ellobius_talpinus.LOJH01081419.1                       I 6 I 20
s Enhydra_lutris.KZ291758.1                               16330761  48 -  41312741 AA--AACA-A-------C--A--TA-TGCAGAAA--T------A--TG----gagat---t---------att--------------a----a----a----------------t-----------------------a---------------------tat------a-t--tt--g----g-----at--------------------------------
i Enhydra_lutris.KZ291758.1                              I 1 I 13
s Eptesicus_fuscus.JH977646.1                              2146885  48 -  14770903 ac--caCA-A-------T--A--TA-TGCAGGAA--G------A--TG----GAGAT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TTC------C-T--TT--A----T-----GT--------------------------------
i Eptesicus_fuscus.JH977646.1                            I 12 I 18
s Erinaceus_europaeus.JH835339.1                           3329344  47 -   7059049 TA--CATA-A-------T--A--TG-TGCAAAAA--T------A--TG----GCTAT---C---------ATT--------------A----A----G----------------A-----------------------A---------------------TAT------A-T--T---T----G-----TA--------------------------------
i Erinaceus_europaeus.JH835339.1                         I 1 I 13
s Erythrocebus_patas.Contig38                             21206428  80 -  21539334 AC--ATCA-A-------T--A--TA-TGTATAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TGT------A-T--TT--A----C-----ATTATGTGtgaagcaacgtctttgtcagtggtaa
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12194  48 +    133382 GC--AACA-A-------C--A--TA-TGCAGGAA--T------G--TG----GAGAT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------CAT------A-T--TT--A----T-----AT--------------------------------
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 1 I 18
s Eubalaena_japonica.EubJap_flattened_line_31514             26147  48 -     44125 ac--aaca-A-------C--A--TA-TGCTGGAA--T------G--TG----GAGAT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------CAT------A-T--TT--A----T-----AT--------------------------------
i Eubalaena_japonica.EubJap_flattened_line_31514         I 1 I 18
s Felis_catus.CM001381.2                                  20238080  28 + 206538554 AG--GACA-a-------t--a--ta-tgcagtaa--t------a--tg----gagat----------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Felis_catus.CM001381.2                                 I 1 I 24
s Felis_catus_fca126.CM031415.1                           20196923  28 + 205367284 AG--GACA-A-------T--A--TA-TGCAGTAA--T------A--TG----gagat----------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Felis_catus_fca126.CM031415.1                          I 1 I 24
s Felis_nigripes.FelNig_flattened_line_20823                 10677  28 -     36744 AG--GACA-A-------T--A--TA-TGCAGTAA--T------A--TG----GAGAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Felis_nigripes.FelNig_flattened_line_20823             I 1 I 24
s Fukomys_damarensis.KN121974.1                             851540  48 +   3816255 ac--atca-G-------T--A--TA-AAGGGGCA--T------G--TG----TAGAT---T---------AAT--------------A----A----A----------------C-----------------------A---------------------TGT------A-T--TT--A----T-----GT--------------------------------
i Fukomys_damarensis.KN121974.1                          I 2 I 3
s Galago_moholi.ctg2040                                     429687  23 -    453645 ATGTGTCG-A-------T--A--TATTGAAGGAT--A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             7377  23 +     11339 ATGTGTCG-A-------T--A--TATTGAAGGAT--A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            4666  23 +     41679 ATGTGTCA-A-------T--A--TATTGAAGGAT--G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               2577  48 -      9135 ac--actg-a-------c--a--ta-tgcaGGAT--T------A--TG----TAGAT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------CAT------T-T--TT--A----C-----AT--------------------------------
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 I 14
s Giraffa_tippelskirchi.LVKQ01S007888.1                     609776  21 -    660261 --------------------------------------------------------T---T---------ATT--------------A----A----A----------------C-----------------------a---------------------cac------a-t--tt--a----t-----at--------------------------------
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 21 I 17
s Glis_glis.GliGli_scaffold_19807                            32063  38 +     49224 ------CA-G-------T--A--TG-T------G--T------A--TG----TAGAT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TGT------G-C--TT--A----A-----AT--------------------------------
i Glis_glis.GliGli_scaffold_19807                        C 0 I 11
s Gorilla_beringei.k141_3596273                              17234  80 -     32273 AC--ATCA-A-------T--A--TA-TGTAGAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TAT------A-T--TT--A----C-----ATTATATGtgaagcagcatcattgtcagtggtaa
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186339371  80 + 186649187 ac--atca-a-------t--a--ta-tgtagaaa--t------a--tg----taggt---t---------att--------------a----a----a----------------t-----------------------a---------------------tat------a-t--tt--a----c-----attatatgtgaagcagcatcattgtcagtggtaa
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33755  29 +     78134 ------------------------------------T------A--TA----TAGAT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TGT------G-T--TT--A----T-----AT--------------------------------
i Graphiurus_murinus.GraMur_scaffold_10447               I 11 I 11
s Helogale_parvula.HelPar_flattened_line_2585               243460  40 +    327341 AA--GACA-A-------T--A--TA-TGCAGGAA--T------G--TG----GATAT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TAT------------------------------------------------------------
i Helogale_parvula.HelPar_flattened_line_2585            I 1 I 20
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 18982  21 +     36099 --------------------------------------------------------T---T---------ATT--------------A----A----A----------------C-----------------------A---------------------CAC------A-T--TT--A----T-----AG--------------------------------
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 21 I 19
s Heterocephalus_glaber.JH602082.1                        20663311  48 +  22651954 ac--atca-G-------C--G--TA-AAGGGGCA--T------G--TG----TAGAt---t---------ctt--------------a----a----a----------------t-----------------------a---------------------tgt------a-t--tt--a----t-----at--------------------------------
i Heterocephalus_glaber.JH602082.1                       I 2 I 10
s Hipposideros_armiger.JXIK01000431.1                       111656  47 +   1711038 ac--caca-a-------T--A--TA-TGCAAGAA--T------A--TG----GAgat---t---------att--------------a----a----a----------------c-----------------------a---------------------tat------a-t--tt--a----t-----a---------------------------------
i Hipposideros_armiger.JXIK01000431.1                    I 12 I 17
s Hipposideros_galeritus.HipGal_scaffold_101188                226  48 +      9903 AC--CACATA-------T--A--TA-TGCAAGAA--T------A--TG----GACAT---T---------ATT--------------A----A----A----------------C-----------------------A---------------------TAT------A-T--TT--A----T-----A---------------------------------
i Hipposideros_galeritus.HipGal_scaffold_101188          I 12 I 17
s Hoolock_leuconedys.ctg274                                    436043  80 +    630532 ac--atca-a-------t--a--ta-tgtagaaa--t------a--tg----taggt---t---------att--------------a----a----a----------------t-----------------------a---------------------tat------a-t--tt--a----c-----atTATAAGtgaagcagcatcattgtcagtgggaa
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46156  30 +     55795 AA--GACA-A-------T--A--TA-TTCAGGAA--T------A--TG----GAGAT---T---------A--------------------------------------------------------------------------------------------------------------------------------------------------------
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 1 I 26
s Hystrix_cristata.HysCri_scaffold_5660                      84196  48 +    135385 AC--GTTA-G-------C--A--TA-AAAGAGTA--T------G--TG----TAGAT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------CAT------T-T--TT--A----T-----AT--------------------------------
i Hystrix_cristata.HysCri_scaffold_5660                  I 6 I 10
s Ictidomys_tridecemlineatus.JH393364.1                    7522081  30 -   7955117 AT--ATCA-A-------T--A--TG-TACAGGCA--T------A--TG----TACAT---C---------A--------------------------------------------------------------------------------------------------------------------------------------------------------
i Ictidomys_tridecemlineatus.JH393364.1                  I 6 I 36
s Inia_geoffrensis.IniGeo_flattened_line_48101               23737  44 +     23964 AC--A----A-------C--A--TA-TGCAGAAA--T------G--TG----GAGAT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------CAT------A-T---T--A----T-----AT--------------------------------
i Inia_geoffrensis.IniGeo_flattened_line_48101           I 1 I 18
s Jaculus_jaculus.JH725527.1                               8278247  47 -   9596543 AC--AACA-A-------T--A--TA-TGAAGACA--T------A--TA----CAAGT---C---------Atg--------------a----a----a----------------t-----------------------a---------------------cac------a-t--at--t----t------t--------------------------------
i Jaculus_jaculus.JH725527.1                             C 0 I 16
s Kogia_breviceps.KogBre_flattened_line_192630                3108  48 -      3359 ac--aaca-a-------c--a--ta-tgcaggaa--t------g--tg----gagat---t---------att--------------a----a----a----------------t-----------------------a---------------------cAT------A-T--TT--A----T-----AT--------------------------------
i Kogia_breviceps.KogBre_flattened_line_192630           I 1 I 18
s Lasiurus_borealis.LasBor_scaffold_50988                    16300  48 +     29960 AC--TACA-A-------T--A--TA-TGCAGGAG--G------A--TG----GAGAT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TTC------C-T--TT--A----T-----GT--------------------------------
i Lasiurus_borealis.LasBor_scaffold_50988                I 96 I 23
s Leontocebus_fuscicollis.k141_1820339                        9130  76 +     64341 AC--ATCA-A-------T--A--CG-TGTAGGGA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------C-----------------------A---------------------TAT------G-T--TT--A----C-----ATTGTGTGTGATGCAGcatc---gtcaggggt-a
i Leontocebus_fuscicollis.k141_1820339                   C 0 I 1
s Leontocebus_illigeri.k141_1304848                           1472  76 -     35062 AC--ATCA-A-------T--A--CG-TGTAGGGA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------C-----------------------A---------------------TAC------G-T--TT--A----C-----ATTGTGTGTGATGCAGcatc---gtcaggggt-a
i Leontocebus_illigeri.k141_1304848                      C 0 I 1
s Leontocebus_nigricollis.k141_4610752                        9159  76 +     35603 AC--ATCA-A-------T--A--CG-TGTAGGGA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------C-----------------------A---------------------TAC------G-T--TT--A----C-----ATTGTGTGTGATGAAGcatc---gtcaggggt-a
i Leontocebus_nigricollis.k141_4610752                   C 0 I 1
s Leontopithecus_chrysomelas.k141_1519602                    30778  40 +     38576 AC--ATCA-A-------C--A--CA-TGCAGGGA--T------A--TG----TAGGT---C---------ATT--------------A----A----A----------------C-----------------------A---------------------TAC------------------------------------------------------------
i Leontopithecus_chrysomelas.k141_1519602                C 0 I 36
s Leontopithecus_rosalia.k141_464620                         27482  40 +     66356 AC--ATCA-A-------C--A--TA-TGCAGGGA--T------A--TG----TAGGT---C---------ATT--------------A----A----A----------------C-----------------------A---------------------TAC------------------------------------------------------------
i Leontopithecus_rosalia.k141_464620                     C 0 I 36
s Leptonychotes_weddellii.KB714746.1                       3044212  48 +   3914936 AA--AACA-A-------T--A--TA-TGCAGAAA--T------A--TG----Gaggt---t---------att--------------a----a----a----------------t-----------------------a---------------------tat------a-t--tt--g----t-----at--------------------------------
i Leptonychotes_weddellii.KB714746.1                     I 1 I 13
s Lepus_americanus.LepAme_scaffold_107385                     7890  46 -     14121 AC--ATCA-G-------T--A--T---ACAGGAA--G------A--TG----TGAAC---T---------AGC--------------A----A----A----------------T-----------------------A---------------------CAT------A-T--TT--G----A-----AT--------------------------------
i Lepus_americanus.LepAme_scaffold_107385                I 6 I 19
s Lipotes_vexillifer.KE559953.1                             268798  47 -    662738 AC--AACA-A-------C--A--TA-TGCAGGAA--T------G--TG----GAgat---t---------att--------------a----a----a----------------t-----------------------a---------------------cat------a-t---t--a----t-----at--------------------------------
i Lipotes_vexillifer.KE559953.1                          I 1 I 18
s Lophocebus_aterrimus.ctg367                              1438392  80 +   1826925 AC--ATCA-A-------T--A--TA-TGTAGAAA--T------G--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TGT------A-T--TT--A----C-----ATTATGTGtgaagcaacatcattgtcagtggtaa
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17956941  16 -  59628241 ---------------------------------------------------------------------------------------g----a----a----------------t-----------------------a---------------------tat------a-t--at--a----t-----at--------------------------------
i Lycaon_pictus.CM007581.1                               I 472 I 950
s Loris_lydekkerianus.k141_399337                            17711  23 -     33856 ACATGTCA-A-------T--A--TACTGAAGGAT--G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Loris_lydekkerianus.k141_399337                        C 0 C 0
s Loris_tardigradus.ctg83                                  1015422  23 +   6120653 ACATGTCA-A-------T--A--TATTGAAGGAT--G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Loris_tardigradus.ctg83                                C 0 C 0
s Macaca_arctoides.k141_2326796                               8203  80 +     40492 AC--ATCA-A-------T--A--TA-TGTAGAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TAT------A-G--TT--A----C-----ATTATGTGtgaagtaacgtcattgtcagtggtaa
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59677464  80 +  60120075 ac--atca-a-------t--a--ta-tgtagaaa--t------a--tg----taGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TAT------A-G--TT--A----C-----ATTATGTGtgaagtaacgtcattgtcagtggtaa
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 13982  80 -     26193 ac--atca-a-------t--a--ta-tgtagaaa--t------a--tg----taggt---t---------att--------------a----a----a----------------t-----------------------a---------------------tat------a-G--TT--A----C-----ATTATGTGtgaagtaacgtcattgtcagtggtaa
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            81758  80 -    114318 AC--ATCA-A-------T--A--TA-TGTAGAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TAT------A-G--TT--A----C-----ATTATGTGtgaagtaacgtcattgtcagtggtaa
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  7449  80 -     23192 AC--ATCA-A-------T--A--TA-TGTAGAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TAT------A-G--TT--A----C-----ATTATGTGtgaagtaacgtcattgtcagtggtaa
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16913  80 -     29190 ac--atca-a-------t--a--ta-tgtaGAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TAT------A-G--TT--A----C-----ATTATGTGtgaagtaacgtcattgtcagtggtaa
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  25491  80 +     37952 ac--atca-a-------t--a--ta-tgtagaaa--t------a--tg----taggt---t---------att--------------a----a----a----------------t-----------------------a---------------------tat------a-G--TT--A----C-----ATTATGTGtgaagtaacgtcattgtcagtggtaa
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186840570  80 + 187317192 ac--atca-A-------T--A--TA-TGTAGAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TAT------A-G--TT--A----C-----ATTATGTgtgaagtaacgtcattgtcagtggtaa
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25459146  80 -  25927173 ac--atca-A-------T--A--TA-TGTAGAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TAT------A-G--TT--A----C-----ATTATGTGtgaagtaacgtcattgtcagtggtaa
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  81347  80 +     89720 ac--atca-a-------t--a--ta-tgtagaaa--t------a--tg----taggt---t---------att--------------a----a----a----------------t-----------------------a---------------------tat------a-g--tt--a----c-----attatGTGtgaagtaacgtcattgtcagtggtaa
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 8340  80 +     20474 AC--ATCA-A-------T--A--TA-TGTAGAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TAT------A-G--TT--A----C-----ATTATGTGtgaagtaacgtcattgtcagtggtaa
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   8137  80 -     14993 ac--atca-a-------t--a--ta-tgtagaaa--t------a--tg----taggt---t---------att--------------a----a----a----------------t-----------------------a---------------------tat------a-g--tt--a----c-----attATGTGtgaagtaacgtcattgtcagtggtaa
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  330999  80 -    668171 ac--atca-a-------t--a--ta-tgtagaaa--t------a--tg----taggt---t---------att--------------a----a----a----------------t-----------------------a---------------------tat------a-g--tt--a----c-----attATGTGtgaagtaacgtcattgtcagtggtaa
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 6449  80 -     24072 AC--ATCA-A-------T--A--TA-TGTAGAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TAT------A-G--TT--A----C-----ATTATGTGtgaagtaacgtcattgtcagtggtag
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               27080  80 -     45290 ac--atca-a-------t--a--ta-tgtagaaa--t------a--tg----taggt---t---------att--------------a----a----a----------------t-----------------------a---------------------tat------a-g--tt--a----c-----atTATGTGtgaagtaacgtcattgtcagtggtaa
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91785  49 +     94391 GA--CACA-A-------T--A--CA-TGCATAAA--T------A--TG----GAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TAT------A-T--TT--T----T----GAT--------------------------------
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 12 I 18
s Mandrillus_leucophaeus.scaffold280                      23938663  80 -  24302211 AC--ATCA-A-------T--A--TA-TGTAGAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TGT------A-T--TT--A----C-----ATTATGTGtgaagcaacatcattgtcagtggtaa
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352783  80 +    752769 AC--ATCA-A-------T--A--TA-TGTAGAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TGT------A-T--TT--A----C-----ATTATGTGtgaagcaacatcattgtcagtggtaa
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              19396  48 +    737560 AC--AACA-A-------T--A--TA-TGCAGGAA--T------A--TG----GAGat---t---------act--------------a----a----a----------------t-----------------------a---------------------tat------a-t--tt--a----t-----at--------------------------------
i Manis_javanica.JSZB01003497.1                          I 1 I 13
s Manis_pentadactyla.KN006162.1                              51382  48 -    317179 AC--AACA-A-------A--A--TA-TGCAGGAA--T------A--TG----GAGat---t---------act--------------a----a----a----------------t-----------------------a---------------------tat------a-t--tt--a----t-----at--------------------------------
i Manis_pentadactyla.KN006162.1                          I 1 I 45
s Marmota_marmota.CZRN01000018.1                          33104368  30 -  40650429 AT--ATCA-A-------T--a--tg-tacaggca--c------a--tg----tacat---c---------a--------------------------------------------------------------------------------------------------------------------------------------------------------
i Marmota_marmota.CZRN01000018.1                         I 6 I 36
s Megaderma_lyra.MegLyr_scaffold_4542                        14487  43 -    207569 AC--CACA-A-------C--A--CA-TGCAGGAA--T------A--TG----GAGAC---T---------ATT--------------A----A----G----------------T-----------------------A---------------------CAT------A-C--T------------------------------------------------
i Megaderma_lyra.MegLyr_scaffold_4542                    I 12 I 18
s Mellivora_capensis.MelCap_flattened_line_69365             11475  46 +     13704 AA--AACA-A-------C--A--TA-TGCAGAAA--T------A--TG----GAGAT---T---------ATT--------------A----A----A----------------T-----------------------A-----------------------T------A-T--TT--G----G-----AT--------------------------------
i Mellivora_capensis.MelCap_flattened_line_69365         I 1 I 13
s Meriones_unguiculatus.MerUng_scaffold_7390                 33851  43 +    140813 -------A-A-------T--G--TA-TACAAGCA--A------A--TA----CATGT---T---------GTT--------------A----G----A----------------T-----------------------T---------------------CAC------A-T--TT--A----T-----GT--------------------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             I 6 I 20
s Mesocricetus_auratus.KB708134.1                         12183307  43 -  29670104 -------T-A-------T--G--TG-CATTACAA--A------A--TG----CAGAT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------CAC------TTT---T--A----T-----AT--------------------------------
i Mesocricetus_auratus.KB708134.1                        I 6 I 20
s Mesoplodon_bidens.MesBid_scaffold_108144                    4403  48 +     10310 AC--AACA-A-------C--G--TA-TGCAGCAA--T------G--TG----GAGAT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------CAT------A-T--TT--A----T-----AT--------------------------------
i Mesoplodon_bidens.MesBid_scaffold_108144               I 1 I 18
s Mico_argentatus.k141_1024458                                 397  74 -     20047 AC--ATCA-A-------C--A--TA-TGTAGGGA--C------A--TG----TAGGT---T---------ATT--------------A----A----A----------------C-----------------------A---------------------TAC------A-T--TT--A----C-----ACTGTGT--GATGCAGcatt---gcc-ggggtaa
i Mico_argentatus.k141_1024458                           C 0 C 0
s Mico_humeralifer.k141_1346949                                810  74 +      1399 AC--ATCA-A-------C--A--TA-TGTAGGGA--C------A--TG----TAGGT---T---------ATT--------------A----A----A----------------C-----------------------A---------------------TAC------A-T--TT--A----C-----ACTGTGT--GATGCAGcatt---gcc-ggggtaa
i Mico_humeralifer.k141_1346949                          C 0 C 0
s Mico_schneideri.k141_916733                                        397  74 +      5107 AC--ATCA-A-------C--A--TA-TGTAGGGA--C------A--TG----TAGGT---T---------ATT--------------A----A----A----------------C-----------------------A---------------------TAC------A-T--TT--A----C-----ACTGTGT--GATGCAGcatt---gcc-ggggtaa
i Mico_schneideri.k141_916733                                  C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                17008  33 -     19307 AC--CACA-A-------T--A--TA-TGCAAGAA--T------A--TG----GAGAT---T---------ACT--------------A---------------------------------------------------------------------------------------------------------------------------------------
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 13 I 33
s Microtus_ochrogaster.CM001695.1                         11261606  42 -  27267610 -------A-A-------T--G--TA-TATTGACA--A------A--TG----TGGAT---T---------AAT--------------A----A----A----------------T-----------------------A---------------------CAC------A-T---T--A----C-----AT--------------------------------
i Microtus_ochrogaster.CM001695.1                        I 6 I 20
s Miopithecus_ogouensis.k141_534055                          10341  80 -     28506 AC--ATCA-A-------T--A--TA-TGTATAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TGT------A-T--TT--A----C-----ATTATGTGtgaagcaacgtcattgtcagtggtaa
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         7079  48 -      8324 AA--AACA-A-------T--A--TA-TGCAGAAA--T------A--TG----GAGAT---C---------ATT--------------A----A----A----------------T-----------------------A---------------------TAT------A-T--TT--G----T-----AT--------------------------------
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 1 I 13
s Monodon_monoceros.MonMon_M_scaffold_103                    27913  47 -    437263 AC--AACA-A-------C--A--TA-TGCAGGAA--T------G--TG----GAGAT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------CAT------A-T---T--A----T-----AT--------------------------------
i Monodon_monoceros.MonMon_M_scaffold_103                I 1 I 18
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142801  32 -    366855 AC--CATG-A-------C--A--TA-TGCA-GAA--T------A--TG----GAGGT---T---------ACT--------------A---------------------------------------------------------------------------------------------------------------------------------------
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 15 I 33
s Moschus_moschiferus.MosMos_scaffold_13123                   1857  21 +     82753 --------------------------------------------------------T---T---------ATT--------------A----A----A----------------C-----------------------A---------------------CAC------A-T--TT--A----T-----AT--------------------------------
i Moschus_moschiferus.MosMos_scaffold_13123              I 21 I 9
s Murina_feae.MurFea_scaffold_85699                           7980  48 +     14753 AC--CACA-A-------T--A--CA-TGCAGAAA--T------A--TA----GAGAT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TTC------A-T--TT--A----T-----GT--------------------------------
i Murina_feae.MurFea_scaffold_85699                      I 11 I 18
s Mus_caroli.LT608237.1                                   84362469  43 - 120012414 -------A-A-------T--G--TA-AATAGGCA--A------A--TG----CAGAT---T---------ATT--------------A----G----A----------------G-----------------------A---------------------CAc------a-t--tt--a----c-----at--------------------------------
i Mus_caroli.LT608237.1                                  I 6 I 20
s Mus_musculus.chr8                                       87651454  43 - 129401213 -------A-A-------T--G--TA-AATAGGCA--A------A--TG----CAGAT---T---------ATT--------------A----G----A----------------T-----------------------A---------------------CAC------A-T--TT--A----C-----AT--------------------------------
i Mus_musculus.chr8                                      I 6 I 20
s Mus_pahari.LT608297.1                                   31356112  59 -  89631738 -------T-ACACTATTT--G--TA-AATAGGCA--A------A--TG----CAGAT---TATTAAGATTATT--------------A----G----A----------------T-----------------------A---------------------CAC------A-T--TT--A----T-----AT--------------------------------
i Mus_pahari.LT608297.1                                  I 6 I 20
s Mus_spretus.CM004101.1                                  90753515  43 - 130317789 -------A-A-------T--G--TA-AATAGGCA--A------A--TG----CAGAT---T---------ATT--------------A----G----A----------------T-----------------------A---------------------CAC------A-T--TT--A----C-----AT--------------------------------
i Mus_spretus.CM004101.1                                 I 6 I 20
s Mustela_putorius.JH418006.1                               302868  48 -  14710649 AA--AACA-A-------C--A--TA-TGCAGAAA--T------A--TG----Gggat---t---------att--------------a----a----a----------------t-----------------------a---------------------tat------a-t--tt--g----g-----at--------------------------------
i Mustela_putorius.JH418006.1                            I 1 I 13
s Myocastor_coypus.MyoCoy_scaffold_10123                     72302  17 -     80779 ------------------------------------------------------------------------A--------------A----G----A----------------C-----------------------A---------------------TGT------A-T--TT--G----T-----AT--------------------------------
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 2 I 10
s Myotis_brandtii.KE162005.1                                281622  48 -  10118263 ac--caca-a-------t--a--ta-tgcagaaa--t------a--tg----gagat---t---------att--------------a----a----a----------------t-----------------------a---------------------ttc------a-t--tt--a----t-----gt--------------------------------
i Myotis_brandtii.KE162005.1                             I 11 I 16
s Myotis_davidii.KB100139.1                                1588877  48 -   6019432 ac--caCA-A-------T--A--TA-TGCAGAAA--T------A--TG----GAGac---t---------att--------------a----a----a----------------t-----------------------a---------------------ttc------a-t--tt--a----t-----gt--------------------------------
i Myotis_davidii.KB100139.1                              I 11 I 18
s Myotis_lucifugus.GL429869.1                              3904974  48 -   4330536 ac--caca-a-------t--a--ta-tgcagaaa--t------a--tg----gagat---t---------att--------------a----a----a----------------t-----------------------a---------------------ttc------a-t--tt--a----t-----gt--------------------------------
i Myotis_lucifugus.GL429869.1                            I 11 I 18
s Myotis_myotis.MyoMyo_scaffold_281845                        1126  48 +      1835 AC--CACA-A-------T--A--TA-TGCAGAAA--T------A--TG----GAGAT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TTC------A-T--TT--A----T-----GT--------------------------------
i Myotis_myotis.MyoMyo_scaffold_281845                   I 11 I 18
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190389  86 +    196477 AC--ATCA-A-------T--C--TG-TGCAGGAA--TTTTTAAC--TGTGCTTCCAT---AA--A-CA--ACA--------------T----T----A----------------TATATATAT-ATTCATATACACACA---------------------TAT------G-T--TCACA----T-----AT--------------------------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 I 14
s Nannospalax_galili.KL204047.1                            2035627  39 -   3037898 -----------------T--A--CA-GGTAGACA--A------A--TG----CAGAT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------CAT------A-C--TT--A----T---------------------------------------
i Nannospalax_galili.KL204047.1                          C 0 I 6
s Nasalis_larvatus.k141_413338                               16366  80 +     21681 AC--ATCA-A-------C--A--TA-TGTAGAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TAT------A-T--TT--A----C-----ATTATGTGtgaagcaacgtcattgtcagtggtaa
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308672  48 +  31847680 AA--AACA-a-------t--a--ta-tgcagaaa--t------a--tg----gagat---t---------att--------------a----a----a----------------t-----------------------a---------------------tat------a-t--tt--g----t-----at--------------------------------
i Neomonachus_schauinslandi.NINY01007730.1               I 1 I 13
s Neophocaena_asiaeorientalis.KZ687982.1                   5866882  47 +   7148211 AC--AACA-A-------C--A--TA-TGCAGGAA--T------G--TG----GAgat---t---------att--------------a----a----a----------------t-----------------------a---------------------cat------a-t---t--a----t-----at--------------------------------
i Neophocaena_asiaeorientalis.KZ687982.1                 I 1 I 18
s Noctilio_leporinus.NocLep_scaffold_251                    759007  49 +    783361 AC--CACA-A-------T--G--TA-TGCAGGAA--T------A--TG----GAGAT---G---------GCT--------------A-A--A----A----------------C-----------------------A---------------------TGC------A-T--TT--A----T-----AT--------------------------------
i Noctilio_leporinus.NocLep_scaffold_251                 I 17 I 18
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150876  16 -   9404916 ---------------------------------------------------------------------------------------g----a----a----------------t-----------------------a---------------------tat------a-t--at--a----t-----at--------------------------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 341 T 182
s Nycticebus_bengalensis.LG01                            102595924  23 - 196305487 ACATGTCA-A-------T--A--TATTGAAGGAT--G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1514628                             1391  23 -      5837 ACATGTCA-A-------T--A--TATTGAAGGAT--G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Nycticebus_coucang.k141_1514628                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771846  23 + 199412804 ACATGTCA-A-------T--A--TATTGAAGGAT--G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1365335  48 +   3988456 AT--ATAA-G-------T--AGAT---GCAGGAA--T------A--TG----TGAAT---T---------AGC--------------A----A----A----------------A-----------------------A---------------------CAT------A-T--TT--G----A-----AT--------------------------------
i Ochotona_princeps.JH802162.1                           I 6 I 19
s Odobenus_rosmarus.KB229312.1                              507817  46 -   2017862 AA--AACA-A-------T--A--TA-TGCAGAAA--T------A--TG----gagat---t---------att--------------a----a----a----------------t-----------------------a-----------------------t------a-t--tt--g----t-----at--------------------------------
i Odobenus_rosmarus.KB229312.1                           I 1 I 13
s Okapia_johnstoni.LVCL01S0005463.1                          77689  21 -    150152 --------------------------------------------------------T---T---------ATC--------------A----A----A----------------C-----------------------a---------------------cac------a-t--tt--a----t-----at--------------------------------
i Okapia_johnstoni.LVCL01S0005463.1                      I 21 I 15
s Ondatra_zibethicus.OndZib_scaffold_46174                   26257  42 +     28053 -------A-C-------T--G--TA-TATTGATA--A------A--TA----CAGGT---T---------AAT--------------A----A----A----------------T-----------------------A---------------------CAC------A-T---T--A----C-----AT--------------------------------
i Ondatra_zibethicus.OndZib_scaffold_46174               I 6 I 20
s Onychomys_torridus.OnyTor_scaffold_2986                    81295  43 +    102263 -------A-G-------T--G--TA-TATTGGCA--A------A--TG----CAGAT---T---------ATT--------------T----A----A----------------T-----------------------A---------------------CAC------A-T--TC--A----T-----GT--------------------------------
i Onychomys_torridus.OnyTor_scaffold_2986                I 6 I 20
s Orcinus_orca.KB316932.1                                  2782791  47 -  10937097 ac--AACA-A-------C--A--TA-TGCAGGAA--T------G--TG----GAgat---t---------att--------------a----a----a----------------t-----------------------a---------------------cat------a-t---t--a----t-----at--------------------------------
i Orcinus_orca.KB316932.1                                I 1 I 18
s Oryctolagus_cuniculus.CM000791.1                        67148791  46 + 174332312 AC--ATCA-G-------T--G--T---ACAGGAA--G------A--TG----TAAAC---T---------AGC--------------A----A----A----------------T-----------------------A---------------------CAT------A-T--TT--G----A-----AT--------------------------------
i Oryctolagus_cuniculus.CM000791.1                       I 6 I 19
s Otocyon_megalotis.JAEUCK010005147.1                       463966  18 -    559221 ---------------------------------------------------------------------------------------g----a----a----------------t-----------------------a---------------------tat------a-tatat--a----t-----at--------------------------------
i Otocyon_megalotis.JAEUCK010005147.1                    I 482 T 325
s Ovis_aries.CM001607.2                                   17586957  21 +  44047080 --------------------------------------------------------T---T---------ATT--------------A----A----A----------------C-----------------------A---------------------CAc------a-t--tt--a----t-----ag--------------------------------
i Ovis_aries.CM001607.2                                  I 21 I 17
s Ovis_canadensis.OviCan_scaffold_2572                      174934  21 -    191736 --------------------------------------------------------T---T---------ATT--------------A----A----A----------------C-----------------------A---------------------CAC------G-T--TT--A----T-----AG--------------------------------
i Ovis_canadensis.OviCan_scaffold_2572                   I 21 I 25
s Otolemur_crassicaudatus.k141_222918                         7179  23 +      8798 ATGTGTCA-A-------T--A--TATTGAAGGAT--G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             699418  23 -   1103335 atgtgtca-A-------T--A--TATTGAAGGAT--G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_paniscus.KQ411613.1                                    45338  80 +     80009 ac--atca-a-------t--a--ta-tgtagaaa--t------a--tg----taggt---t---------att--------------a----a----a----------------t-----------------------a---------------------tat------a-t--tt--a----c-----attatatgtgAAGCAGCATAATTGTCAGTGGTAA
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189144226  80 + 189151597 ac--atca-a-------t--a--ta-tgtagaaa--t------a--tg----taggt---t---------att--------------a----a----a----------------t-----------------------a---------------------tat------a-t--tt--a----c-----attatatgtgaagcagcatcattgtcagtggtaa
i Pan_troglodytes.CM009242.2                             C 0 I 467
s Panthera_onca.PanOnc_flattened_line_3271                  152285  28 +    230217 AG--GATA-A-------T--A--TA-TGCAGTAA--T------A--TG----GAGAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Panthera_onca.PanOnc_flattened_line_3271               I 1 I 24
s Panthera_pardus.KV860321.1                                265494  28 +  18783137 AG--GACA-a-------t--a--ta-tgcagtaa--t------a--tg----gagat----------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Panthera_pardus.KV860321.1                             I 1 I 24
s Panthera_tigris.KE722367.1                               4722374  28 -   8748460 AG--GACA-A-------T--A--TA-TGCAGTAA--T------A--TG----gagat----------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Panthera_tigris.KE722367.1                             I 1 I 24
s Pantholops_hodgsonii.KE114653.1                          1265852  21 -   2937107 --------------------------------------------------------T---T---------ATT--------------A----A----A----------------c-----------------------a---------------------cac------a-t--tt--a----t-----at--------------------------------
i Pantholops_hodgsonii.KE114653.1                        I 21 I 11
s Papio_anubis.CM001495.2                                183444465  80 + 183742232 ac--atca-A-------T--A--TA-TGTAGAAA--T------G--TG----TAggt---t---------att--------------a----a----a----------------t-----------------------a---------------------tgt------a-t--tt--a----c-----attatGTgtgaagcaacatcattgtcagtggtaa
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             8115  80 +     20448 AC--ATCA-A-------T--A--TA-TGTAGAAA--T------G--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TGT------A-T--TT--A----C-----ATTATGTGtgaagcaacatcattgtcagtggtaa
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20564923  80 +  20919399 AC--ATCA-A-------T--A--TA-TGTAGAAA--T------G--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TGT------A-T--TT--A----C-----ATTATGTGtgaagcaacatcattgtcagtggtaa
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6855  80 +     41871 AC--ATCA-A-------T--A--TA-TGTAGAAA--T------G--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TGT------A-T--TT--A----C-----ATTATGTGtgaagcaacatcattgtcagtggtaa
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    10148  80 +     27711 AC--ATCA-A-------T--A--TA-TGTAGAAA--T------G--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TGT------A-T--TT--A----C-----ATTATGTGtgaagcaacatcattgtcagtggtaa
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  1145  80 -     11374 AC--ATCA-A-------T--A--TA-TGTAGAAA--T------G--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TGT------A-T--TT--A----C-----ATTATGTGtgaagcaacatcattgtcagtggtaa
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13780  40 -     78924 AA--GATA-A-------T--A--TA-TGCAGGAA--T------A--TG----GAGAT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TAC------------------------------------------------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 1 I 11
s Perodicticus_ibeanus.k141_1182643                            196  23 -      3244 ATGTGTCA-A-------T--A--TATTGAAGGAT--G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Perodicticus_ibeanus.k141_1182643                      C 0 C 0
s Perodicticus_potto.k141_1186926                              574  23 +     10374 ACGTGTCA-A-------T--A--TATTGAAGGAT--G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Perodicticus_potto.k141_1186926                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18195871  43 -  18517816 -------A-G-------T--G--TA-TATTGGCA--A------A--TG----CAGAT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------CAC------A-T--TT--A----C-----TT--------------------------------
i Peromyscus_maniculatus.KI615324.1                      I 6 I 20
s Petromus_typicus.PetTyp_scaffold_42190                     29224  48 -     29689 AC--ATCA-G-------T--A--TG-AAGGGACA--T------G--TG----TAGAG---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TGT------A-T--TT--A----T-----AT--------------------------------
i Petromus_typicus.PetTyp_scaffold_42190                 I 2 I 10
s Phocoena_phocoena.PhoPho_flattened_line_24159               9836  47 +     63832 AC--AACA-A-------C--A--TA-TGCAGGAA--T------G--TG----GAGAT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------CAT------A-T---T--A----T-----AT--------------------------------
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 1 I 18
s Piliocolobus_badius.k141_1234363                           44862  80 +     62158 AC--ATCA-A-------C--A--TA-TGTAGAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TAT------A-T--TT--A----C-----ATTATGTGtgaagcaacgtcattgtcagtggtaa
i Piliocolobus_badius.k141_1234363                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        39611  80 +     89929 ac--atca-a-------c--a--ta-tgtagaaa--t------a--tg----taggt---t---------att--------------a----a----a----------------t-----------------------a---------------------tat------a-t--tt--a----c-----aTTATGTGtgaagcaacgtcattgtcagtggtaa
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            41025  80 +     51399 AC--ATCA-A-------C--A--TA-TGTAGAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TAT------A-T--TT--A----C-----ATTATGTGtgaagcaacgtcattgtcagtggtaa
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14297268  80 -  14605196 ac--atca-A-------C--A--TA-TGTAGAAA--T------A--TG----Taggt---t---------att--------------a----a----a----------------t-----------------------a---------------------tat------a-t--tt--a----c-----attatgtgtgaagcaacgtcattgtcagtggtaa
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2908  48 +     22620 AC--CACA-A-------T--A--TA-TGCAGGAA--G------A--TG----GAGAT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------ATC------C-T--TT--A----T-----GT--------------------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 7 I 18
s Platanista_gangetica.PlaMin_flattened_line_32310           35529  48 +     35617 AC--AACA-A-------C--A--TA-TGCAGGAA--T------G--TG----GAGAT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------CAT------A-T--TT--A----T-----GT--------------------------------
i Platanista_gangetica.PlaMin_flattened_line_32310       I 1 I 18
s Pongo_abelii.CM009266.2                                189132365  80 + 189387572 ac--atca-a-------t--a--ta-tgtagaaa--t------a--tg----taggt---t---------att--------------a----a----a----------------t-----------------------a---------------------tat------a-t--tt--a----c-----attatatgtgaagcagcatcattgtcagtggtaa
i Pongo_abelii.CM009266.2                                C 0 I 24760
s Pongo_pygmaeus.ctg66                                     9571972  80 +   9816681 AC--ATCA-A-------T--A--TA-TGTAGAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TAT------A-T--TT--A----C-----ATTATATGtgaagcagcatcattgtcagtggtaa
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               74551  80 -     81375 ac--atca-a-------c--a--ta-tgtagaaa--t------a--tg----taggt---t---------att--------------a----a----a----------------t-----------------------a---------------------tat------a-t--tt--a----c-----atTATGTGtgaagcaacgtcattgtcagtggtaa
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              6368  80 +     19060 AC--ATCA-A-------C--A--TA-TGTAGAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TAT------A-T--TT--A----C-----ATTATGTGtgaagcaacgtcattgtcagtggtaa
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            11497  43 -     21651 -------A-A-------T--G--TA-TACAAGCA--A------A--TA----CATAT---T---------GTA--------------A----G----A----------------T-----------------------T---------------------CAC------A-T--TT--A----T-----GT--------------------------------
i Psammomys_obesus.NESX01036370.1                        I 6 I 20
s Pteronotus_parnellii.KE909381.1                            16290  31 -     21811 ----TGCA-A-------T--A--TA-TGAAGGAA--T------G--TG----GAgat---t---------act--------------a---------------------------------------------------------------------------------------------------------------------------------------
i Pteronotus_parnellii.KE909381.1                        I 9 I 33
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41675  48 +     42204 AA--TACA-A-------C--A--TA-TGCAGAAA--T------A--TG----GAGAT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TAT------A-T--TT--G----G-----AT--------------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 1 I 13
s Pteropus_alecto.KB030862.1                              22977927  48 +  28871421 GC--CACA-A-------T--A--CA-TGCAAGAA--T------A--TG----Gaggt---t---------att--------------a----a----a----------------t-----------------------a---------------------tat------a-t--tt--t----t-----at--------------------------------
i Pteropus_alecto.KB030862.1                             I 12 I 18
s Pteropus_vampyrus.KN534172.1                                7980  48 -      8028 GC--CACA-A-------T--A--CA-TGCAAGAA--T------A--TG----Gaggt---t---------att--------------a----a----a----------------t-----------------------a---------------------tat------a-t--tt--t----t-----at--------------------------------
i Pteropus_vampyrus.KN534172.1                           I 12 n 12
s Puma_concolor.QAVW01001104.1                            20275446  28 -  38429054 AG--GACA-a-------t--a--ta-tgcagtaa--t------a--tg----gagat----------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Puma_concolor.QAVW01001104.1                           I 1 I 22
s Pygathrix_cinerea.k141_1153803                             16352  80 -     91421 AC--ATCA-A-------C--A--TA-TGTAGAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TAT------A-T--TT--A----C-----ATTATGTGtgaagcaacgtcattgtcagtggtaa
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7610472  80 +   7812017 AC--ATCA-A-------C--A--TA-TGTAGAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TAT------A-T--TT--A----C-----ATTATGTGtgaagcaacgtcattgtcagtggtaa
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             16351  80 -     72585 AC--ATCA-A-------C--A--TA-TGTAGAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TAT------A-T--TT--A----C-----ATTATGTGtgaagcaacgtcattgtcagtggtaa
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6431  21 +     55207 --------------------------------------------------------T---T---------ATT--------------A----A----A----------------C-----------------------A---------------------CAC------A-T--TT--A----T-----AT--------------------------------
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 21 I 13
s Rattus_norvegicus.chr16                                 53571703  23 +  90668790 -------A-A-------A--G--TA-TCTAGGCA--A------A--TG----CAGAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Rattus_norvegicus.chr16                                I 6 I 38
s Rhinolophus_sinicus.LVEH01000134.1                        368142  47 -   3329780 ac--aaca-A-------T--A--TA-TGCAAGAA--T------A--TG----GAGAT---t---------act--------------a----a----a----------------t-----------------------a---------------------cat------a-t--tt--a----t-----a---------------------------------
i Rhinolophus_sinicus.LVEH01000134.1                     I 12 I 17
s Rhinopithecus_bieti.k119_217274                             8068  80 -     11128 ac--atca-a-------c--a--ta-tgtagaaa--t------a--tg----taggt---t---------att--------------a----a----a----------------t-----------------------a---------------------tat------a-t--tt--a----c-----aTTATGTGtgaagcaacgtcattgtcagtggtaa
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91237417  80 - 195417433 ac--atca-A-------C--A--TA-TGTAGAAA--T------A--TG----TAGgt---t---------att--------------a----a----a----------------c-----------------------a---------------------tat------a-t--tt--a----c-----attatGTGtgaagcaacatcattgtcagtggtaa
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7673079  80 +   7961872 ac--atca-a-------c--a--ta-tgtagaaa--t------a--tg----taGGt---t---------att--------------a----a----a----------------t-----------------------a---------------------tat------a-t--tt--a----c-----attatgtGtgaagcaacgtcattgtcagtggtaa
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                88975  48 -     96226 GC--CACA-A-------T--A--CA-TGCAGGAA--T------A--TG----GAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TAA------A-T--TT--T----T-----AT--------------------------------
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 12 I 18
s Saguinus_bicolor.k141_8081                                  2442  75 +     42994 AC--ATCA-A-------T--A--TG-TGTAGGGA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------C-----------------------A---------------------CAC------G-T--TT--A----C-----ATTGTGTGGGGTGCAGCATC----tcaggggt-a
i Saguinus_bicolor.k141_8081                             C 0 I 1
s Saguinus_imperator.k141_1496743                             1139  76 +      2253 AC--ATCA-A-------T--A--TG-TGTAGGGA--T------A--TG----TAGGT---T---------ATG--------------A----A----A----------------C-----------------------A---------------------CAC------A-T--TC--A----C-----ATTGTGTGTGATGCAGCATC---GTCAGGGTA-C
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               1568  76 -      8737 AC--ATCA-A-------T--A--TG-TGTAGGGA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------C-----------------------A---------------------CAC------A-T--TT--A----C-----ATTGTGTGTGATGCAGCATC---GTCAGGGTA-C
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                              1221  76 +      2343 AC--ATCA-A-------T--A--TG-TGTAGGGA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------C-----------------------A---------------------CAC------A-T--TT--A----C-----ATTGTGTGTGATGCAGCATC---GTCAGGGTA-C
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209476100  76 + 209938924 AC--ATCA-A-------T--A--TG-TGTAGGGA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------C-----------------------A---------------------CAC------G-T--TT--A----C-----ATTGTGTGGGATGCAGcatc---gtcaggggt-a
i Saguinus_midas.LG03                                    C 0 I 1
s Saguinus_mystax.k141_4699220                                 544  76 -      7576 AC--ATCA-A-------T--A--TG-TGTAGGGA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------C-----------------------A---------------------CAC------A-T--TT--A----C-----ATTGTGTGTGACGCAGCACC---GTCAGGGTA-C
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119952182  77 - 121099817 ac--atca-A-------T--A--TA-TGTACGGA--T------A--TG----TAggt---t---------att--------------a----a----a----------------t-----------------------a---------------------tat------g-t--tt--a----c-----attgtGTGTGATGCAGCATC---GTCAGGGGTAA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24524  77 +     46362 AC--ATCA-A-------T--A--TA-TGTACGGA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TAT------G-T--TT--A----C-----ATTGTGTGTGATGCAGCATC---GTCAGGGGTAA
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               24619  77 +     45824 AC--ATCA-A-------T--A--TA-TGTACGGA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TAT------G-T--TT--A----C-----ATTGTGTGTGATGCAGCATC---GTCAGGGGTAA
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             41298  77 -     64574 AC--ATCA-A-------T--A--TA-TGTACGGA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TAT------G-T--TT--A----C-----ATTGTGTGTGATGCAGCATC---GTCAGGGGTAA
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4371  77 -     23631 AC--ATCA-A-------T--A--TA-TGTACGGA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TAT------G-T--TT--A----C-----ATTGTGTGTGATGCAGCATC---GTCAGGGGTAA
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 24515  77 -     61129 AC--ATCA-A-------T--A--TA-TGTACGGA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TAT------G-T--TT--A----C-----ATTGTGTGTGATGCAGCATC---GTCAGGGGTAA
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5421859  74 -   5703754 A----TCA-A-------T--A--TA-TGGAGGGA--T------A--TG----TAGGT---A---------ATT--------------A----A----A----------------T-----------------------A---------------------CAT------G-T--TT--A----C-----ACTGTGTGTGCTGCAGCATC---GTC-GGGGTAA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          57100  74 -     80660 A----TCA-A-------T--A--TA-TGGAGGGA--T------A--TG----TAGGT---A---------ATT--------------A----A----A----------------T-----------------------A---------------------CAT------G-T--TT--A----C-----ACTGTGTGTGCTGCAGCATC---GTC-GGGGTAA
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154335  47 -    313613 AC--AACA-A-------A--A--TA-TGCAGGAA--T------C--TG----GGTAT---A---------AGT--------------A----A----A----------------T-----------------------A---------------------TTT------A-T--T---T----T-----TA--------------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 1 I 15
s Semnopithecus_entellus.k141_1672505                         1247  80 -     12572 ac--atca-a-------c--a--ta-tgtagaaa--t------a--tg----taggt---t---------aTT--------------A----A----A----------------T-----------------------A---------------------TAC------A-T--TT--A----C-----ATTATGTGtgaagcaacgtcattgtcagtggtaa
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      28099  80 +     39453 ac--atca-a-------c--a--ta-tgtagaaa--t------a--tg----taggt---t---------att--------------A----A----A----------------T-----------------------A---------------------TAC------A-T--TT--A----C-----ATTATGTGtgaagcaacgtcattgtcagtggtaa
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            8607  80 +     27826 AC--ATCA-A-------C--A--TA-TGTAGAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TAC------A-T--TT--A----C-----ATTATGTGtgaagcaacgtcattgtcagtggtaa
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             8141  80 -     19483 ac--atca-a-------c--a--ta-tgtagaaa--t------a--tg----taggt---t---------att--------------a----a----a----------------t-----------------------a---------------------tac------a-t--tt--a----c-----aTTATGTGtgaagcaacgtcattgtcagtggtaa
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      1446  80 -     12762 ac--atca-a-------c--a--ta-tgtagaaa--t------a--tg----taggt---t---------att--------------a----a----a----------------t-----------------------a---------------------tac------a-t--tt--a----c-----attATGTGtgaagcaacgtcattgtcagtggtaa
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           1293  80 +     13763 AC--ATCA-A-------C--A--TA-TGTAGAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TAC------A-T--TT--A----C-----ATTATGTGtgaagcaacgtcattgtcagtggtaa
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     1392  43 -     30804 -------A-A-------T--G--TG-TATTAGAA--A------A--TG----CAGAT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------CAC------G-T--TT--A----C-----AT--------------------------------
i Sigmodon_hispidus.SigHis_scaffold_42075                I 6 I 20
s Solenodon_paradoxus.SolPar_flattened_line_126               4884  44 +   1910179 TC--AGCA-A-------T--A--TA-TGCAGGAA--T------A--TG----AATAT---G---------ATT--------------A----A----A----------------T-----------------------G-----------------------T------C-A--C---C----T-----A---------------------------------
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 8
s Sorex_araneus.JH798187.1                                13652127  52 -  18376816 ac--aata-a-------T--A--CA-GGCAGGAT--T------A--TG----GATat---t---------atg--------------a----a----a-----atacatatttgt-----------------------a-----------------------C------T-A--C------------------------------------------------
i Sorex_araneus.JH798187.1                               C 0 I 20
s Spermophilus_dauricus.KZ294078.1                         1955227  30 -   3870691 AT--ATCA-A-------T--A--TG-TACAGGCA--T------A--TG----TACAT---C---------A--------------------------------------------------------------------------------------------------------------------------------------------------------
i Spermophilus_dauricus.KZ294078.1                       I 6 I 36
s Spilogale_gracilis.SpiGra_flattened_line_13525             32149  48 +     97271 AA--AATG-A-------T--A--TA-TGCAGGAA--T------A--TG----GAGAC---C---------ATT--------------A----A----A----------------T-----------------------A---------------------TAT------A-T--TT--G----T-----AT--------------------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 1 I 13
s Suricata_suricatta.SurSur_flattened_line_6629              19465  40 -    196729 AA--GACA-A-------T--A--TA-TGCAGAAA--T------A--CG----GATAT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TAT------------------------------------------------------------
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 I 15
s Sus_scrofa.CM000828.4                                    6812256  54 +  69701581 ac--caca-a-------cATA--TA-TGTAGGAA--T------G--CC----AAGAT---T---------ATA--------------A----A----A----------------T-----------------------G---------------------TAT------A-C--tt--aNNNNt-----ac--------------------------------
i Sus_scrofa.CM000828.4                                  I 23 I 9
s Tadarida_brasiliensis.TadBra_scaffold_25820                11957  48 +     41958 AC--CACA-A-------T--A--TA-TGCAGGAA--T------A--TG----AAGAT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TAC------A-T--TT--T----T-----AT--------------------------------
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 12 I 18
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73756 104 +    116680 AC--ATCA-A-------T--C--TG-TGCAGGGA--TTTTTAAC--TGTGCTTCCAT---AA--A-CA--ACAGAGTAGGTAGATCATTATAT----A----------------TATATATAT-ATCCACATACACACA---------------------TAT------G-T--TCACA----T-----AT--------------------------------
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 I 14
s Theropithecus_gelada.CM009954.1                        186429771  80 + 186847797 ac--atca-a-------t--a--ta-tgtagaaa--t------a--tg----taggt---t---------att--------------a----a----a----------------t-----------------------a---------------------tgt------a-t--tt--a----c-----attatGTGtgaagcaacatcattgtcagtggtaa
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106516  48 +    114563 AC--ATCA-G-------T--A--TG-AAGGGCCA--T------G--TG----TAGAT---T---------TTT--------------A----A----A----------------T-----------------------A---------------------TGT------A-T--TT--A----T-----AT--------------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 2 I 10
s Tolypeutes_matacus.TolMat_scaffold_228639                   7497  83 +      8208 CC--ACCA-T-------C--A--CA-TGCAGGGA--CTT-AAAT--TATGCTTACAT---A---------ACA--------------C----C----A----------------TAGGTAGATTATT-ACACGCACACA---------------------CATGT----A-A--TCACA----T-----AG--------------------------------
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 I 14
s Tonatia_saurophila.TonSau_scaffold_294                     82353  32 +    610378 AC--CACA-A-------T--A--TA-TACAGGAA--C------A--TG----GAAAT---T---------ACT------------------------------------------------------------------------------------------------------------------------------------------------------
i Tonatia_saurophila.TonSau_scaffold_294                 I 13 I 30
s Trachypithecus_auratus.k141_722599                         12192  80 -     20410 ac--atca-a-------c--a--ta-tgtagaaa--t------a--tg----taggt---t---------att--------------a----a----a----------------t-----------------------a---------------------tac------a-t--tt--a----c-----aTTATGTGtgaagcaacgtcattgtcagtggtaa
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      1308  80 -     12674 ac--atca-a-------c--a--ta-tgtagaaa--t------a--tg----taggt---t---------att--------------a----a----a----------------t-----------------------a---------------------tac------a-t--tt--a----c-----atTATGTGtgaagcaacgtcattgtcagtggtaa
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       12299  80 +     19930 ac--atca-a-------c--a--ta-tgtagaaa--t------a--tg----taggt---t---------att--------------a----a----a----------------t-----------------------a---------------------tac------a-t--tt--a----c-----attATGTGtgaagcaacgtcattgtcagtggtaa
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       8696  80 -     19997 AC--ATCA-A-------C--A--TA-TGTAGAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TAC------A-T--TT--A----C-----ATTATGTGtgaagcaacgtcattgtcagtggtaa
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48841  80 -     60166 ac--atca-a-------c--a--ta-tgtagaaa--t------a--tg----taGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TAC------G-T--TT--A----T-----ATTATGTGtgaagcaacgtcattgtcagtggtaa
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        16303  80 -     27529 AC--ATCA-A-------C--A--TA-TGTAGAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TAC------A-T--TT--A----C-----ATTATGTGtgaagcaacgtcattgtcagtggtaa
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     16253  80 -     18194 AC--ATCA-A-------C--A--TA-TGTAGAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TAC------A-T--TT--A----C-----ATTATGTGtgaagcaacgtcattgtcagtggtaa
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                           9965  80 -     21137 AC--ATCA-A-------C--A--TA-TGTAGAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TAC------A-T--TT--A----C-----ATTATGTGtgaagcaacgtcattgtcagtggtaa
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    8666  80 -     10723 AC--ATCA-A-------C--A--TA-TGTAGAAA--T------A--TG----TAGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TAC------A-T--TT--A----C-----ATTATGTGtgaagcaacgtcattgtcagtggtaa
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7842  80 +      9834 ac--atca-a-------c--a--ta-tgtagaaa--t------a--tg----taGGT---T---------ATT--------------A----A----A----------------T-----------------------A---------------------TAC------A-T--TT--A----C-----ATTATGTGtgaagcaacgtcattgtcagtggtaa
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        26165  80 +     32220 aC--atca-a-------c--a--ta-tgtagaaa--t------a--tg----taggt---t---------att--------------a----a----a----------------t-----------------------a---------------------tac------a-t--tt--a----c-----attATGTGtgaagcaacgtcattgtcagtggtaa
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5940261  80 +   6242583 ac--atca-a-------c--a--ta-tgtagaaa--t------a--tg----taggt---t---------att--------------a----a----a----------------t-----------------------a---------------------tac------a-t--tt--a----c-----atTATGTGtgaagcaacgtcattgtcagtggtaa
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        9514  80 +     20839 ac--atca-a-------c--a--ta-tgtagaaa--t------a--tg----taggt---t---------att--------------a----a----a----------------t-----------------------a---------------------tac------a-t--tt--a----c-----atTGTGTGtgaagcaacgtcattgtcagtggtaa
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                     766  31 +     27266 AC--CACA-A-------C--A--CA-CATAGGAA--T------G--TG----GAGAT---T---------GC-------------------------------------------------------------------------------------------------------------------------------------------------------
i Tragulus_javanicus.TraJav_scaffold_40725               I 1 I 18
s Tupaia_chinensis.KB320699.1                              2156923  48 +   4065304 AC--AGCA-A-------T--A--CA-TGCAGGAA--G------A--CT----CAGAC---T---------ACT--------------A----A----A----------------T-----------------------A---------------------CAG------G-C--TT--A----C-----GT--------------------------------
i Tupaia_chinensis.KB320699.1                            C 0 I 13
s Tupaia_tana.TupTan_flattened_line_97126                    10370  48 -     10553 AC--ATTA-A-------T--A--CA-TGCAGGAA--G------A--CT----CACAC---T---------ACT--------------A----A----A----------------T-----------------------A---------------------TAG------G-T--TT--A----C-----AT--------------------------------
i Tupaia_tana.TupTan_flattened_line_97126                C 0 I 13
s Tursiops_truncatus.MRVK01000835.1                       15739036  47 +  33153633 AC--AACA-A-------C--A--TA-TGCAGGAA--T------G--TG----GAGCT---T---------ATT--------------A----A----A----------------t-----------------------a---------------------cat------a-c---t--a----t-----at--------------------------------
i Tursiops_truncatus.MRVK01000835.1                      I 3 I 18
s Uropsilus_gracilis.UroGra_scaffold_12083                   54431  47 -     77625 AA--AACA-A-------A--A--TA-TGCAAGAA--T------A--TG----GGTAT---A---------AAT--------------A----A----G----------------T-----------------------A---------------------CAT------C-A--T---T----T-----TA--------------------------------
i Uropsilus_gracilis.UroGra_scaffold_12083               I 1 I 14
s Ursus_maritimus.KK499267.1                               4851544  36 -   5085361 ---------------------------Gcagaaa--t------a--ta----aagat---t---------att--------------a----a----a----------------t-----------------------a---------------------tat------a-t--tt--g----t-----at--------------------------------
i Ursus_maritimus.KK499267.1                             C 0 I 13
s Vicugna_pacos.KN270157.1                                 5372917  47 -   5488506 gc--caCA-A-------C--A--TA-TGCAGGAA--T------G--TG----GAGag---t---------att--------------a----a----a----------------t-----------------------a---------------------tgt------a-t--tt--a----t-----a---------------------------------
i Vicugna_pacos.KN270157.1                               C 0 I 16
s Vulpes_lagopus.VulLag_flattened_line_30954                 12406  16 -     43706 ---------------------------------------------------------------------------------------G----A----A----------------T-----------------------A---------------------TAT------A-T--AT--A----T-----AT--------------------------------
i Vulpes_lagopus.VulLag_flattened_line_30954             I 474 T 320
s Xerus_inauris.XerIna_scaffold_2302                          2229  60 +    224448 AT--ATCA-G-------T--A--TG-TATAGGCA--T------A--TG----TACAT---C---------ATT--------------A----A----A----------------T-----------------------AT-TGC--------Ctatgctatat------g-t--tt--a----t-----at--------------------------------
i Xerus_inauris.XerIna_scaffold_2302                     I 6 I 11
s Zapus_hudsonius.ZapHud_scaffold_11398                      15983  48 +     63895 AT--AGCA-G-------T--A--TA-TGAAGGCA--T------A--TA----CAAAT---T---------ATG--------------A----A----A----------------T-----------------------A---------------------CAC------A-T--AT--A----T-----AC--------------------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 16
e Echinops_telfairi.JH980293.1                            48781881  13 + 111700974 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476  16 +      4343 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294941  30 +  10818551 I
e Tarsius_wallacei.k141_254427                                1877   3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080   3 +     70052 I
e Tapirus_terrestris.TapTer_scaffold_755                    388291  19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821  19 -    156842 I
e Symphalangus_syndactylus.tarseq_199                      1093192   0 -   1523678 C
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790  14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690  60 +     32600 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271  14 -     18566 I
e Odocoileus_virginianus.KZ100018.1                         145831   4 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398   7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             35221   4 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1851541   4 +   8254450 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593  14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Loxodonta_africana.GL010049.1                            4219653  30 -  43346337 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052   0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157   0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374   0 +     14092 C
e Hylobates_agilis.k141_232023                                2330   0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577   3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337  14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Equus_przewalskii.KK951119.1                               34467  19 +    498745 I
e Equus_caballus.CM000403.2                               18532438  19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631  19 +   4378816 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115  19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363  19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542  19 -     25243 I
e Cephalopachus_bancanus.k141_1423433                         6085   3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Carlito_syrichta.NW_007259797.1                           156587   3 -    496798 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       8073 149 +     62944 gtaccaggggttcatcctcttgtgctgagaaaattaaggacatgaac---------------ac---atgtgggtgggtta--aggagtggaaa-g-tttaataggcagaagaaag--g-agagag--gagagcagctccttGT--G--AGAGAG--AGG-TGTCAGaaa-gggggacagtgtc
s Allenopithecus_nigroviridis.k141_3361533                   15988 149 -     52922 ataccaggggttcattctcttgtgctgagaaaattaaggacacgaac---------------ac---atgtgggtgggtta--aggagtggaaa-g-ttcaataggcagaagaaag--g-agagag--gagagccgctccttgt--g--agagag--agg-tgtcctaaa-gggggacggtgtc
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         15902 149 -     28001 ataccaggggttcattctcttgtgctgagaaaattaaggacacgaac---------------ac---atgtgggtgggtta--aggagtggaaa-g-ttcaataggcagaagaaag--g-agagag--gagagccgctccttgt--g--agagag--agg-tgtcctaaa-gggggacggtgtc
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          6402 149 -     18505 ataccaggggttcattctcttgtgctgagaagattaaggacacgaac---------------ac---atgtgggtgggtta--aggagtggaaa-g-ttcaataggcagaagaaag--g-agagag--gagagccgctccttgt--g--agagag--agg-tgtcctaaa-gggggacggtgtc
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           7254 149 -     12518 ataccaggggttcattctcttgtgctgagaagattaaggacacgaac---------------ac---atgtgggtgggtta--aggagtggaaa-g-ttcaataggcagaagaaag--g-agagag--gagagccgctccttgt--g--agagag--agg-tgtcctaaa-gggggacggtgtc
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              8812 139 +     51355 ataccaggcattcaccctcctgtgcagagaaagtgaagcacacaaac---------------gc---acgtgggtgg-tta--agga-----aa-g-tgtaataggcagaagaacg--g-agagag--gag--tagctcctggt--g--agagag--gtg-tgtccaaaa-tggggacagcg--
i Alouatta_belzebul.k141_3560514                         C 0 I 3
s Alouatta_caraya.k141_1701091                                1921 139 -     36483 ataccaggcattcaacctcctgtgcagagaaagtgaagcacacaaac---------------gc---acgtgggtgg-tta--agga-----aa-g-tgtaataggcagaagaagg--g-agagag--gag--tagctcctggt--g--agagag--gcg-tgtccaaaa-tggggacagcg--
i Alouatta_caraya.k141_1701091                           C 0 I 3
s Alouatta_discolor.k141_566626                              12373 139 +     28687 ataccaggcattcaccctcctgtgcagagaaagtgaagcacacaaac---------------gc---acgtgggtgg-tta--agga-----aa-g-tgtaataggcagaagaagg--g-agagag--gag--tagctcctggt--g--agagag--gtg-tgtccaaaa-tggggacagcg--
i Alouatta_discolor.k141_566626                          C 0 I 3
s Alouatta_juara.k141_1302312                                  886 139 +     27940 ataccaggcattcaccctcctgtgcagagaaagtgaagcacacaaac---------------ac---acgtgggtgg-tta--agga-----aa-g-tgtaataggcagaagaagg--g-agagag--gag--tagctcctggt--g--agagag--gca-tgtccaaaa-tggggacagcg--
i Alouatta_juara.k141_1302312                            C 0 I 3
s Alouatta_macconnelli.k141_918386                            1930 139 -      9457 ataccaggcattcaccctcctgtgcagagaaagtgaagcacacaaac---------------ac---acgtgggtgg-tta--agga-----aa-g-tgtaataggcagaagaagg--g-agagag--gag--tagctcctggt--g--agagag--gca-tgtccaaaa-tggggacagcg--
i Alouatta_macconnelli.k141_918386                       C 0 I 3
s Alouatta_nigerrima.k141_1929159                              886 139 +     30492 ataccaggcattcaccctcctgtgcagagaaagtgaagcacacaaac---------------gc---acgtgggtgg-tta--agga-----aa-g-tgtaataggcagaagaagg--g-agagag--gag--tagctcctggt--g--agagag--acg-tgtccaaaa-tggggacagcg--
i Alouatta_nigerrima.k141_1929159                        C 0 I 3
s Alouatta_palliata.k141_2135620                              4881 139 +     47717 ataccaggcattcaccctcctgtgcagagaaagtgaagcacacaaac---------------gc---acgtgggtgg-tta--agga-----aa-g-tgtaataggcagaagaagg--g-agagag--gag--tagctcctggt--g--agagag--gcg-tgtccaaaa-tggggacagcg--
i Alouatta_palliata.k141_2135620                         C 0 I 3
s Alouatta_puruensis.k141_362188                              1613 139 +      5663 ataccaggcattcaccctcctgtgcagagaaagtgaagcacacaaac---------------gc---acgtgggtgg-tta--agga-----aa-g-tgtaataggcagaagaagg--g-agagag--gag--tagctcctggt--g--agagag--gca-tgtccaaaa-tggggacagcg--
i Alouatta_puruensis.k141_362188                         C 0 I 3
s Alouatta_seniculus.k141_117119                             16065 139 +     50774 ataccaggcattcaccctcctgtgcagagaaagtgaagcacacaaac---------------ac---acgtgggtgg-tta--agga-----aa-g-tgtaataggcagaagaagg--g-agagag--gag--tagctcctggt--g--agagag--gca-tgtccaaaa-tggggacagcg--
i Alouatta_seniculus.k141_117119                         C 0 I 3
s Aotus_azarae.k141_3104676                                  17056 141 -     33861 ATAC-AGGCACTCACCCTCTCATGCGGAGAAAATGAAGCACACAAACGCATGCAGAGAAAACGC---ATGTGGGTGGCTTT--AGGA-----AA-G-TGTAACAGGCAGAAGAAGG--G-AGAGAG--GAG--TAGCTCTTGGC--G--AGAG--AGGTG-TGTCCGA----------------
i Aotus_azarae.k141_3104676                              C 0 I 2
s Aotus_griseimembra.k141_2240599                            17053 142 -     34016 ataccaggcactcaccctctcatgcggagaaaatgaagcacacaaacgcatgcagagaaaacgc---atgtgggtggcttt--agga-----aa-g-tgtaacaggcagaagaagg--g-agagag--gag--tagctcttggc--a--agag--aggtg-tgtccga----------------
i Aotus_griseimembra.k141_2240599                        C 0 I 2
s Aotus_nancymaae.KZ198451.1                               4299480 142 -   5030052 ATACCAGGCACTCACCCTCTCATGCGGAGAAAATGAAGCACACAAACGCATGCAGAGAAAACGC---ATGTGGGTGGCTTT--AGGA-----AA-G-TGTAACAggcagaagaagg--g-agagag--gag--taGCTCTTGGC--G--AGAG--AGGTG-TGTCCGA----------------
i Aotus_nancymaae.KZ198451.1                             C 0 I 2
s Aotus_trivirgatus.k141_2152450                             17089 142 -     34685 ATACCAGGCACTCACCCTCTCATGAGGAGAAAATGAAGCACACAAACGCATGCAGAGAAAACGC---ATGTGGGTGGCTTT--AGGA-----AA-G-TGTAACAGGCAGAAGAAGG--G-AGAGAG--AAG--TAGCTCTTGGC--G--AGAG--AGGTG-TGTCCGA----------------
i Aotus_trivirgatus.k141_2152450                         C 0 I 2
s Aotus_vociferans.k141_344750                               30214 141 -     47192 atac-aggcactcaccctctcatgcggagaaaatgaagcacacaaacgcatgcagagaaaacgc---atgtgggtggcttt--agga-----aa-g-tgtaacaggcagaagaagg--g-agagag--aag--tagctcttggc--g--agag--aggtg-tgtccga----------------
i Aotus_vociferans.k141_344750                           C 0 I 2
s Callibella_humilis.k141_10318                                835 124 +     27907 -taccaggcactcactctcttgtgcggaggaaatgaagcacacaaac---------------gc---atgtgggtgtgtta--ggga-----aa-g-tgtaataggcagaagaagg--g-agagag--gag--cagctcttggc--g--agag----gtg-tgtccaa----------------
i Callibella_humilis.k141_10318                          C 0 I 2
s Callimico_goeldii.k141_737284                                475 125 -     31217 ataccaggcactcaccctctcgtgcggaggaaatgaagcacacaaac---------------gc---atgtgggtgtgtta--aggg-----aa-g-tgtaataggcagaagaagg--g-agtgag--gag--tagctctTGGC--A--AGAA----GTG-TGTTGGA----------------
i Callimico_goeldii.k141_737284                          C 0 I 2
s Callithrix_geoffroyi.k119_69176                              771 124 +      5377 -taccaggcactcaccctcttgtgcggaggaaatgaagcacacaaac---------------gc---atgtgggtgtgtta--ggga-----aa-g-tgtaataggcagaagaagg--g-agagag--gag--cagctcttggc--g--agag----gtg-tgtccga----------------
i Callithrix_geoffroyi.k119_69176                        C 0 I 2
s Callithrix_jacchus.pat_scaffold_3                       23592632 124 - 189096842 -TACCAGGCACTCACCCTCTTGTGCGGAGGAAATGAAGCACACAAAC---------------GC---ATGTGGGTGTGTTA--GGGA-----AA-G-TGTAATAGGCAGAAGAAGG--G-AGAGAG--GAG--CAGCTCTTGGC--G--AGAG----GTG-TGTCCGA----------------
i Callithrix_jacchus.pat_scaffold_3                      C 0 I 2
s Callithrix_kuhlii.k119_1168854                              1446 124 -     12329 -taccaggcactcaccctcttgtgcggaggaaatgaagcacacaaac---------------gc---atgtgggtgtgtta--ggga-----aa-g-tgtaataggcagaagaagg--g-agagag--gag--cagctcttggc--g--agag----gtg-tgtccga----------------
i Callithrix_kuhlii.k119_1168854                         C 0 I 2
s Cebuella_niveiventris.k141_280505                          14545 113 +     15466 -TACCAGGCACTCACCCTCTCTTGAGGAGGAAATGAAGcacacaaag---------------gctcaaaataaagggatgg--agga-----ag-a-tttaccaagcaaatggaga--gcaaaaaa--aag--caggagttgca----------------------------------------
i Cebuella_niveiventris.k141_280505                      C 0 C 0
s Cebuella_pygmaea.k141_793006                                 472 124 -     15088 -taccaggcactcaccctctcttgaggaggaaatgaagcacacaaac---------------ac---atgtgggtgtgtta--gggg-----aa-g-tgtaataggcagaagaagg--g-agagag--gag--cagctcttgga--g--agag----gtg-tgtccga----------------
i Cebuella_pygmaea.k141_793006                           C 0 I 2
s Cebus_albifrons.Contig27                                25653975  89 +  26074798 ATACCAGGCACTCACCCTCTCGTGCGGAGAAAATGAAGCCCACAGAC---------------GC---ATGTGGGTGGGTTA--AGGA-----AA-G-TGTAACGGGCAGAAGAAGG--------------------------------------------------------------------
i Cebus_albifrons.Contig27                               I 33 I 15
s Cebus_olivaceus.k141_1764483                                1913  89 +     28840 ATACCAGGCACTCACCCTCTCGTGCGGAGAAAATGAAGCCCACAGAC---------------GC---ATGTGGGTGGGTTA--AGGA-----AA-G-TGTAACGGGCAGAAGAAGG--------------------------------------------------------------------
i Cebus_olivaceus.k141_1764483                           I 33 I 15
s Cebus_unicolor.k141_1837183                                 1642  89 +     14051 ATACCAGGCACTCACCCTCTCGTGCGGAGAAAATGAAGCCCACAGAC---------------GC---ATGTGGGTGGGTTA--AGGA-----AA-G-TGTAACAGGCAGAAGAAGG--------------------------------------------------------------------
i Cebus_unicolor.k141_1837183                            I 33 I 15
s Cercocebus_atys.KQ010504.1                               4476919 149 +   4669795 ataccaggggttcatcctctcatgctgagaaaattaagaacaagaac---------------ac---atgtggGTGGGT--TAAGGAGTGGAAA-G-TTcaataggcagaagaaaggag-agag----gagagccgCTCCTTGT--G--AGAGAG--AGG-TGTCCTAAA-GGGGGACGGTGTC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        1421 149 +     17872 ataccaggggttcatcctctcatgctgagaaaattagggacacgaac---------------ac---atgtgggtgggt--taaggagtggaaa-g-ttcaataggcagaagaaaggag-agag----gagagccgctccttgt--g--agagag--agg-tgtcctaaa-gggggacggtgtc
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           2010 149 -     14043 ataccaggggttcatcctctcatgctgagaaaattaagaacaagaac---------------ac---atgtgggtgggt--taaggagtggaaa-g-ttcaataggcagaagaaaggag-agag----gagagccgctccttgt--g--agagag--agg-tgtcctaaa-gggggacggtgtc
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          10115 145 +     27781 ataccaggggttcatcctctcatgctgagaaaattaaggacacgaac---------------ac---aagtgggtgggt----aggagtggaaa-g-ttcaataggcagaagaaag--g-agag----gagagccgctccttgt--g--agagag--agg-tgtcctaaa-gggggacggtgtc
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        10271 148 -     20310 ataccaggggttcattctcttgtgctgagaaaattaaggacacgaac---------------ac---atgtgggtgggtta--aggagtggaaa-g-ttcaagaggcagaagaaag--g-agagag--gagagccgctccttgt--g--agagag--agg-tgtcctaaa-ggggg-cggtgtc
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          13251 148 +     29689 ataccaggggttcattctcttgtgctgagaaaattaaggacacgaac---------------at---atgtgggtgggtta--aggagtggaaa-g-ttcaataggcagaagaaag--g-agagag--gagagccgctccttgt--g--agagag--agg-tgtcctaaa-ggggg-cggtgtc
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            8001 148 -     20078 ataccaggggttcattctcttgtgctgagaaaattaaggacacgaac---------------ac---atgtgggtgggtta--aggagtggaaa-g-ttcaagaggcagaagaaag--g-agagag--gagagccgctccttgt--g--agagag--agg-tgtcctaaa-ggggg-cggtgtc
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          15923 148 -     27936 ataccaggggttcattctcttgtgctgagaaaattaaggacacgaac---------------ac---atgtgggtgggtta--aggagtggaaa-g-ttcaagaggcagaagaaag--g-agagag--gagagccgctccttgt--g--agagag--agg-tgtcctaaa-gggga-cggtgtc
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            4789 148 -     17152 ataccaggggttcattctcttgtgctgagaaaattaaggacacgaac---------------ac---atgtgggtgggtta--aggagtggaaa-g-ttcaagaggtagaagaaag--g-agagag--gagagccgctccttgt--g--agagag--agg-tgtcctaaa-gggga-cggtgtc
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38818330 148 +  39242232 ataccaggggttcattctcttgtgctgagaaaattaaggacacgaac---------------ac---atgcgggtgggtta--aggagtggaaa-g-ttcaagaggcagaagaaag--g-agagag--gagagccgctccttgt--g--agagag--agg-cgtcctaaa-ggggg-cggcgtc
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21224023 148 -  21565898 ataccaggggttcattctcttgtgctgagaaaattaaggacacgaac---------------ac---atgtgggtgggtta--aggagtggaaa-g-ttcaagaggcagaagaaag--g-agagag--gagagccgctccttgt--g--agagag--agg-tgtcctaaa-gggga-cggtgtc
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       41142 148 -     53127 ataccaggggttcattctcttgtgctgagaaaattaaggacacgaac---------------ac---atgtgggtgggtta--aggagtggaaa-g-ttcaagaggcagaagaaag--g-agagag--gagagccgctccttgt--g--agagag--agg-tgtcctaaa-gggga-cggtgtc
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        1389 146 +     13442 ataccaggggttcattctcttgtgctgagaaaattaaggacacgaac---------------ac---atgtgggtgggtta--aggagtggaaa-g-ttcaagaggcagaagaaag--g-agag----gagagccgctccttgt--g--agagag--agg-tgtcctaaa-ggggg-cggtgtc
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       15938 148 -     27947 ataccaggggttcattctcttgtgctgagaaaattaaggacacgaac---------------ac---atgtgggtgggtta--aggagtggaaa-g-ttcaagaggtagaagaaag--g-agagag--gagagccgctccttgt--g--agagag--agg-tgtcctaaa-ggggg-cggtgtc
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         15913 149 +     17596 ataccaggggttcattctcttgtgctgagaaaattaaggacacgaac---------------ac---atgtgggtgggtta--aggagtggaaa-g-ttcaataggcagaagaaag--g-agagag--gagagccgctccttgt--g--agagag--agg-tgtcctaaaggggga-cggtgtc
i Cercopithecus_pogonias.k141_822820                     I 33 C 0
s Cercopithecus_roloway.k141_2581234                          1969 148 +     14005 ataccaggggttcattctcttgtgctgagaaaattaaggacacgaac---------------ac---atgtgggtgggtta--aggagtggaaa-g-ttcaagaggcagaagaaag--g-agagag--gagagccgctccttgt--g--agagag--tgg-tgtcctaaa-ggggg-cggtgtc
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chiropotes_albinasus.k141_2206961                           2253 130 -     15524 atcccaggcactcactctctcgtgcggaggaaatgcagcacacaaac---------------gc---atgtgggtgtgtga--agga-----aa-g-tgtaacaggcagaagaagg--g-agagag--gag--tagctcttggc--g--agaggg---gg-tgttcgaaa-cg-----------
i Chiropotes_albinasus.k141_2206961                      C 0 I 40
s Chlorocebus_aethiops.ctg25                              18429908 149 -  18827391 ataccaggggttcattctcttgtgctgagaaaattaaggacacgaac---------------ac---atgtgggtgggtta--aggagtggaaa-g-ttcaataggcagaagaaag--g-agagag--gagagccgctccttgt--g--agagag--agg-tgtcctaaa-gggggacggtgtc
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       16342 149 -     50209 ataccaggggttcattctcttgtgctgagaaaattaaggacacgaac---------------ac---atgtgggtgggtta--aggagtggaaa-g-ttcaataggcagaagaaag--g-agagag--gagagccgctccttgt--g--agagag--agg-tgtcctaaa-gggggacggtgtc
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135423343 149 + 135778131 ataccaggggttcattctcttgtgctgagaaaattaaggacacgaac---------------ac---atgtgggtgggtta--aggagtggaaA-G-TTCaataggcagaagaaag--g-agagag--gagagccgCTCCTTGT--G--AGAGAG--AGG-TGTCCTAAA-GGGGGACGGTGTC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1911827  48 +   2368649 ataccaggggttcatcctcttgtgctgagaaaattaaggacacgaac---------------a-------------------------------------------------------------------------------------------------------------------------
i Colobus_angolensis.KN981557.1                          C 0 I 603
s Colobus_guereza.LG01                                   199950075  48 + 200372422 ataccaggggttcatcctcttgtgctgagaaaattaaggacacgaac---------------a-------------------------------------------------------------------------------------------------------------------------
i Colobus_guereza.LG01                                   C 0 I 603
s Colobus_polykomos.k141_906115                              38355  48 +     84244 ataccaggggttcatcctcttgtgctgagaaaattaaggacacgaac---------------a-------------------------------------------------------------------------------------------------------------------------
i Colobus_polykomos.k141_906115                          C 0 I 599
s Erythrocebus_patas.Contig38                             21206508 149 -  21539334 atactaggggttcattctcttgtgctgagaaaattaaggacacgaac---------------ac---atgtgggtgggtta--aggagtggaaa-g-ttcaataggcagaagaaag--g-agagag--gagagctgctccttgt--g--agagag--agg-tgtcctaaa-gggggacggtgtc
i Erythrocebus_patas.Contig38                            C 0 C 0
s Gorilla_beringei.k141_3596273                              17314 149 -     32273 gtaccaggggttcatcctcttgtgctgagaaaattaaggacatgaac---------------ac---atgtgggtgggtta--aggagtggaaa-g-tttaataggcagaagaaag--g-agagag--gagagcagctccttgt--g--agagag--agg-tgtcagaaa-gggggacagtgtc
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186339451 149 + 186649187 gtaccaggggttcatcctcttgtgctgagaaaattaaggacatgaac---------------ac---atgtgggtgggtta--aggagtggaaa-g-tttaataggcagaagaaag--g-agagag--gagagcagctccttgt--g--agagag--agg-tgtcagaaa-gggggacagtgtc
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hoolock_leuconedys.ctg274                                    436123 148 +    630532 gtaccaggggttcatcctcttgtgctgagaaaattaaggacacgaac---------------ac---aagtgggcgggttt--aggagtggaaa-g-tttaacaggcagaagaaag--g-agagag--gagagcagctccttgt--g--agagag--agg-tgtcagaaa-gggggacgg-gtc
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        9207 127 +     64341 atcccaggaactcaccctcgcgtgcggaggaaatgcagcacacaaac---------------gc---atgtgggtgtgtta--agga-----aa-g-tgtaacaggcagaagaagg--g-agagag--gag--tagctcttggc--g--agag--agggg-tgttcga----------------
i Leontocebus_fuscicollis.k141_1820339                   I 1 I 2
s Leontocebus_illigeri.k141_1304848                           1549 127 -     35062 atcccaggaactcaccctcgcgtgcggaggaaatgcagcacacaaac---------------gc---atgtgggtgtgtta--agga-----aa-g-tgtaacaggcagaagaaag--g-agagag--gag--tagctcttggc--g--agag--agggg-tgttcga----------------
i Leontocebus_illigeri.k141_1304848                      I 1 I 2
s Leontocebus_nigricollis.k141_4610752                        9236 127 +     35603 atcccaggaactcaccctcgcgtgcggaggaaatgcagcacacaaac---------------gc---atgtgggtgtgtta--agga-----aa-g-tgtaacaggcagaagaagg--g-agagag--gag--tagcttttggc--g--agag--agggg-tgttcga----------------
i Leontocebus_nigricollis.k141_4610752                   I 1 I 2
s Leontopithecus_chrysomelas.k141_1519602                    30854 125 +     38576 ataccaggcactcaccctctcgtgcggaggcaatgaagcacacgaac---------------gc---atgtgggtgtgtta--agga-----ga-a-tgtaataggcagaagaagg--g-agagag--gaa--tagctcttggc--g--agag----gtg-tGTCTGA----------------
i Leontopithecus_chrysomelas.k141_1519602                I 36 I 2
s Leontopithecus_rosalia.k141_464620                         27558 125 +     66356 ataccaggcactcaccctctcgtgcggaggcaatgaagcacacgaac---------------gc---atgtgggtgtgtta--agga-----ga-g-tgtaataggcagaagaagg--g-agagag--gag--tagctcttggc--g--agag----gtg-tgtccga----------------
i Leontopithecus_rosalia.k141_464620                     I 36 I 2
s Lophocebus_aterrimus.ctg367                              1438472 147 +   1826925 ataccaggggttcatcctctcatgctgagaaagttaaggacacgaac---------------ac---atgtgggtgggt----aggagtggaaa-g-ttcaataggcagaagaaag--g-agagag--gagagccgctccttgt--g--agagag--agg-tgtcctaaa-gggggacggtgtc
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                               8283 149 +     40492 ataccaggggttcatcctctcatgctgagaaaattaaggacacgaac---------------ac---atgtgggtgggtta--aggagtggaaa-g-ttcaataggcagaagaaag--g-agagag--gagagccgctccttgt--g--agagag--agg-tgtcctaaa-gggggacagtgtc
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59677544 149 +  60120075 ataccaggggttcatcctctcatgctgagaaaattaaggacacgaac---------------ac---atgtgggtgggtta--aggagtggaaa-g-ttcaataggcagaagaaag--g-agagag--gagagccgctccttgt--g--agagag--agg-tgtcctaaa-gggggacagtgtc
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 14062 149 -     26193 ataccaggggttcatcctctcatgctgagaaaattaaggacacgaac---------------ac---atgtgggtgggtta--aggagtggaaa-g-ttcaataggcagaagaaag--g-agagag--gagagccgctccttgt--g--agagag--agg-tgtcctaaa-gggggacagtgtc
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            81838 149 -    114318 ataccaggggttcatcctctcatgctgagaaaattaaggacacgaac---------------ac---atgtgggtgggtta--aggagtggaaa-g-ttcaataggcagaagaaag--g-agagag--gagagccgctccttgt--g--agagag--agg-tgtcctaaa-gggggacagtgtc
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  7529 149 -     23192 ataccaggggttcatcctctcatgctgagaaaattaaggacacgaac---------------ac---atgtgggtgggtta--aggagtggaaa-g-ttcaataggcagaagaaag--g-agagag--gagagccgctccttgt--g--agagac--agg-tgtcctaaa-gggggacagtgtc
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                16993 149 -     29190 ataccaggggttcatcctctcatgctgagaaaattaaggacacgaac---------------ac---atgtgggtgggtta--aggagtggaaa-g-ttcaataggcagaagaaag--g-agagag--gagagccgctccttgt--g--agagag--agg-tgtcctaaa-gggggacagtgtc
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  25571 149 +     37952 ataccaggggttcatcctctcatgctgagaaaattaaggacacgaac---------------ac---atgtgggtgggtta--aggagtggaaa-g-ttcaataggcagaagaaag--g-agagag--gagacccgctccttgt--g--agagag--agg-tgtcctaaa-gggggacagtgtc
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186840650 149 + 187317192 ataccaggggttcatcctctcatgctgagaaaattaaggacacgaac---------------ac---atgtgggtgggtta--agGAGTGGAAA-G-TTCaataggcagaagaaag--g-agagag--gagagccgCTCCTTGT--G--AGAGAG--AGG-TGTCCTAAA-GGGGGACAGTGTC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25459226 149 -  25927173 ataccaggggttcatcctctcatgctgagaaaattaaggacacgaac---------------ac---atgtgggtgggtta--AGGAGTGGAAA-G-TTCaataggcagaagaaag--g-agagag--gagagccgCTCCTTGT--G--AGAGAG--AGG-TGTCCTAAA-GGGGGACAGTGTC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  81427 149 +     89720 ataccaggggttcatcctctcatgctgagaaaattaaggacacgaac---------------ac---atgtgggtgggtta--aggagtggaaa-g-ttcaataggcagaagaaag--g-agagag--gagagccgctccttgt--g--agagag--agg-tgtcctaaa-gggggacagtgtc
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 8420 149 +     20474 ataccaggcgttcatcctctcatgctgagaaaattaaggacacgaac---------------ac---atgtgggtgggtta--aggagtggaaa-g-ttcaataggcagaagaaag--g-agagag--gagagccgctccttgt--g--agagag--agg-tgtcctaaa-gggggacagtgtc
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   8217 149 -     14993 ataccaggggttcatcctctcatgctgagaaaattaaggacacgaac---------------ac---atgtgggtgggtta--aggagtggaaa-g-ttcaataggcagaagaaag--g-agagag--gagagccgctccttgt--g--agagag--agg-tgtcctaaa-gggggacagtgtc
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  331079 149 -    668171 ataccaggggttcatcctctcatgctgagaaaattaaggacacgaac---------------ac---atgtgggtgggtta--aggagtggaaa-g-ttcaataggcagaagaaag--g-agagag--gagagccgctccttgt--g--agagag--agg-tgtcctaaa-gggggacagtgtc
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 6529 149 -     24072 ataccaggggttcatcctctcatgctgagaaaattaaggacacgaac---------------ac---atgtgggtgggtta--aggagcggaaa-g-ttcaataggcagaagaaag--g-agagag--gagagccgctccttgt--g--agagag--agg-tgtcctaaa-gggggacagtgtc
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               27160 149 -     45290 ataccaggggttcatcctctcatgctgagaaaattaaggacacgaac---------------ac---atgtgggtgggtta--aggagtggaaa-g-ttcaataggcagaagaaag--g-agagag--gagagccgctccttgt--g--agagag--agg-tgtcctaaa-gggggacagtgtc
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23938743 145 -  24302211 ataccaggggttcatcctctcatgctgagaaaattaaggacacgaac---------------ac---atgtgggtgggt----aggagtggaaa-g-ttcaataggcagaagaaag--g-agag----gagagccgctccttgt--g--agagag--agg-tgtcctaaa-gggggacggtgtc
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352863 136 +    752769 ataccaggggttcatcctctcatgctgagaaaattaaggacacgaac---------------ac---atgtgggtgggt----aggagtggaaa-g-ttcaataggcagaagaaag--g-agag----gagagccgctccttgt--g--agagag--agg-tgtcctaaa-gggg---------
i Mandrillus_sphinx.Contig270                            C 0 I 7
s Mico_argentatus.k141_1024458                                 471 124 -     20047 -taccaggcactcaccctcttgtgcggaggaaatgaagcacacaaac---------------gc---atgtgggtgtgtta--ggga-----aa-g-tgtaataggcagaagaagg--g-agagag--gag--cagctcttggc--g--agag----gtg-tgtccga----------------
i Mico_argentatus.k141_1024458                           C 0 I 2
s Mico_humeralifer.k141_1346949                                884 124 +      1399 -taccaggcactcaccctcttgtgcggaggaaatgaagcacacaaac---------------gc---atgtgggtgtgtta--ggga-----aa-g-tgtaataggcagaagaagg--g-agagag--gag--cagctcttggc--g--agag----gtg-tgtccga----------------
i Mico_humeralifer.k141_1346949                          C 0 I 2
s Mico_schneideri.k141_916733                                        471 124 +      5107 -taccaggcactcaccctcttgtgcggaggaaatgaagcacacaaac---------------gc---atgtgggtgtgtta--ggga-----aa-g-tgtaataggcagaagaagg--g-agagag--gag--cagctcttggc--g--agag----gtg-tgtccga----------------
i Mico_schneideri.k141_916733                                  C 0 I 2
s Miopithecus_ogouensis.k141_534055                          10421  94 -     28506 ataccaggggttcattctcttgtgctgagaaaattaaggacacgaac---------------ac---atgtgggtgggtta--aggagtggaaa-g-ttcaataggcagaagaaag--------------------------------------------------------------------
i Miopithecus_ogouensis.k141_534055                      C 0 I 53
s Nasalis_larvatus.k141_413338                               16446 149 +     21681 ataccaggggttcatcctctcgtgttgagaaaattaaggacacgaac---------------ac---atgtgggtgggc--taaggagtggaaa-g-ttcaataggcagaagaaag--g-agag--aggagagccgctccatgt--g--agagag--agg-tgtcctaaa-gggggacggtgtc
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Pan_paniscus.KQ411613.1                                    45418 149 +     80009 GTACCAGGGGTTCATCCTCTTGTGCTGAGAAAATTAAGGACATGAAC---------------AC---ATGTGGGTGGGTTA--AGGAGTGgaaa-g-tttaataggcagaagaaag--g-agagag--gagagcagctcCTTGT--G--AGAGAG--AGG-TGTCAGAAA-GGGGTACAGTGTC
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.KZ622849.1                                 23605 149 +    110857 gtaccaggggttcatcctcttgtgctgagaaaattaaggacatgaac---------------ac---aTGTGGGTGGGTTa--aggagtggaaa-g-tttaataggcagaagaaag--g-agagag--gagagcagctcCTTGT--G--AGAGAG--AGG-TGTCAGAAA-GGGGGACAGTGTC
i Pan_troglodytes.KZ622849.1                             I 84 C 0
s Papio_anubis.CM001495.2                                183444545 147 + 183742232 ataccaggggttcatcctctcatgctgagaaaattaaggacacgaac---------------ac---atgtgggTGGGT----AGGAGTGGAAA-G-TTCaataggcagaagaaag--g-agagag--gagagccgCTCCTTGT--G--AGAGAG--AGG-TGTCCTAAA-GGGGGACGGTGTC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             8195 147 +     20448 ataccaggggttcatcctctcatgctgagaaaattaaggacacgaac---------------ac---atgtgggtgggt----aggagtggaaa-g-ttcaataggcagaagaaag--g-agagag--gagagccgctccttgt--g--agagag--agg-tgtcctaaa-gggggacggtgtc
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20565003 147 +  20919399 ataccaggggttcatcctctcatgctgagaaaattaaggacacgaac---------------ac---atgtgggtgggt----aggagtggaaa-g-ttcaataggcagaagaaag--g-agagag--gagagccgctccttgt--g--agagag--agg-tgtcctaaa-gggggacggtgtc
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   6935 147 +     41871 ataccaggggttcatcctctcatgctgagaaaattaaggacacgaac---------------ac---atgtgggtgggt----aggagtggaaa-g-ttcaataggcagaagaaag--g-agagag--gagagccgctccttgt--g--agagag--agg-tgtcctaaa-gggggacggtgtc
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    10228 147 +     27711 ataccaggggttcatcctctcatgctgagaaaattaaggacacgaac---------------ac---atgtgggtgggt----aggagtggaaa-g-ttcaataggcagaagaaag--g-agagag--gagagccgctccttgt--g--agagag--agg-tgtcctaaa-gggggacggtgtc
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  1225 149 -     11374 ataccaggggttcatcctctcacgctgagaaaattaaggacacgaac---------------ac---atgtgggtgggt----aggagtggaaa-g-ttcaataggcagaagaaag--g-agagag--gagagccgctccttgtaag--agagag--agg-tgtcctaaa-gggggacggtgtc
i Papio_ursinus.k141_5274964                             C 0 C 0
s Piliocolobus_badius.k141_1234363                           44942  48 +     62158 ataccaggggtttatcctcttgtgctgagaaaattaaggacacgaac---------------a-------------------------------------------------------------------------------------------------------------------------
i Piliocolobus_badius.k141_1234363                       C 0 N 0
s Piliocolobus_gordonorum.k141_381342                        39691  48 +     89929 ataccaggggtttatcctcttgtgctgagaaaattaaggacacgaac---------------a-------------------------------------------------------------------------------------------------------------------------
i Piliocolobus_gordonorum.k141_381342                    C 0 I 615
s Piliocolobus_kirkii.k141_448987                            41105  48 +     51399 ataccaggggtttatcctcttgtgctgagaaaattaaggacacgaac---------------a-------------------------------------------------------------------------------------------------------------------------
i Piliocolobus_kirkii.k141_448987                        C 0 I 615
s Piliocolobus_tephrosceles.PDMG02000141.1                14297348  48 -  14605196 ataccaggggtttatcctcttgcgctgagaaaattaaggacacgaac---------------a-------------------------------------------------------------------------------------------------------------------------
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 615
s Pongo_abelii.NDHI03003595.1                                 3269 149 -     34550 gtaccaggggttcatcctcttgtgctgagaaaattaaggacatgaac---------------ac---aTGTGGGTGAGCta--aggagtggaaa-g-tttaataggcagaagaaag--g-agagag--gagagcagctccttgT--A--AGAGAG--AGG-TGTCAGAAA-GGGGGACAGTGTC
i Pongo_abelii.NDHI03003595.1                            I 352 I 323
s Pongo_pygmaeus.ctg66                                     9572052 149 +   9816681 gtaccaggggttcatcctcttgtgctgagaaaattaaggacatgaac---------------ac---atgtgggtgagcta--aggagtggaaa-g-tttaataggcagaagaaag--g-agagag--gagagcagctccttgt--a--agagag--agg-tgtcagaaa-gggggacagtgtc
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               74631 149 -     81375 atactaggggttcatcctctcgtgttgagaaaattaaggacacgaac---------------ac---atgtgggtaggt--taaggagtggaaa-g-ttcaataggcagaagaaag--g-agaa--aggagagccgctccatgt--g--agagag--agg-tgtcctaaa-gggggatggtgtc
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              6448 149 +     19060 atactaggggttcatcctctcgtgttgagaaaattaaggacacgaac---------------ac---atgtgggtaggt--taaggagtggaaa-g-ttcaataggcagaagaaag--g-agaa--aggagagccgctccatgt--g--agagag--agg-tgtcctaaa-gggggatggtgtc
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Pygathrix_cinerea.k141_1153803                             16432 149 -     91421 ataccaggggttcatcctctcgtgttgagaaaattaaggacacgaac---------------ac---atgtgggtgggt--taaggagtgcaaa-g-ttcaataggcagaagaaag--g-agag--aggagagccgctccatgt--g--agagag--agg-tgtcctaaa-gggggacggtgtc
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7610552 149 +   7812017 ataccaggggttcatcctctcgtgttgagaaaattaaggacacgaac---------------ac---atgtgggtgggt--taaggagtgcaaa-g-ttcaataggcagaagaaag--g-agag--aggagagccgctccatgt--g--agagag--agg-tgtcctaaa-gggggacggtgtc
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             16431 149 -     72585 ataccaggggttcatcctctcgtgttgagaaaattaaggacacgaac---------------ac---atgtgggtgggt--taaggagtgcaaa-g-ttcaataggcagaagaaag--g-agag--aggagagccgctccatgt--g--agagag--agg-tgtcctaaa-gggggacggtgtc
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             8148 149 -     11128 ataccaggggttcatcctcccgtgttgagaaaattaaggacatgaac---------------ac---atgtgggtgggt--taaggagtggaaa-g-ttcaataggcagaagaaag--g-agag--aggagagccgctccatgt--g--agagag--agg-tgtcctaaa-gggggacggtgtc
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91237497 149 - 195417433 ataccaggggttcatcctctcgtgttgagaaaattaaggacatgaac---------------ac---atgtgggtgggt--taaggagtggAAA-G-TTCaataggcagaagaaag--g-agag--aggagagccgCTCCATGT--G--AGAGAG--AGG-TGTCCTAAA-GGGGGACGGTGTC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7673159 149 +   7961872 ataccaggggttcatcctctcgtgttgagaaaattaaggacatgaac---------------ac---atgtgggtgggt--taaggagtggaaa-g-ttcaataggcagaagaaag--g-agag--aggagagccgctccatgt--g--agagag--agg-tgtcctaaa-gggggacggtgtc
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_8081                                  2518 121 +     42994 atcccaggcactcactctctcgtgcggaggaaatgcagcacacaaac---------------gc---atgtgggtgtgtta--agga-----aa-g-tgtaacaggcagaagaagg--g-agagag--gag--tagctcttggc--g--agag----ggggtg---------------------
i Saguinus_bicolor.k141_8081                             I 1 I 66
s Saguinus_imperator.k141_1496743                             1215  82 +      2253 ATCCCAGGCACGCACCCCCTC-TGCGGAGGAAATGCAGCACACAAAC---------------GC---ATGT-GGTGTGGTA--AGGA-----AA-G-TGTAACAGGCAGAA-------------------------------------------------------------------------
i Saguinus_imperator.k141_1496743                        C 0 I 24
s Saguinus_inustus.k141_3945547                               1644 123 -      8737 ATCCCAGGCACTCACCCTCTCGTGCGGAGGAAATGCAGCACACAAAC---------------GC---ATGT-GGTGTGGTA--AGGA-----AA-G-TGTAACAGGCAGAAG---G--G-AGAGAG--GAG--TAGCCCTTGGC--GAGAGAG----GGG-TGTTCGA----------------
i Saguinus_inustus.k141_3945547                          C 0 I 2
s Saguinus_labiatus.k141_4004060                              1297  90 +      2343 ATCCCAGGCACTCACCCTCTCGTGCGGAGGAAATGCAGCACACAAAC---------------GC---ATGT-GGTGTGTTA--AGGA-----AA-G-TGTAACAGGCAGAAG---G--G-A-------GAG-----------------------------------------------------
i Saguinus_labiatus.k141_4004060                         C 0 I 14
s Saguinus_midas.LG03                                    209476177 119 + 209938924 atcccaggcactcaccctctcgtgcggaggaaatgcagcaca--aac---------------gc---atgtgggtgtgtta--agga-----aa-g-tgtaacaggcagaagaagg--g-agagag--gag--tagctcttggc--g--agag----ggggtg---------------------
i Saguinus_midas.LG03                                    I 1 I 66
s Saguinus_mystax.k141_4699220                                 620  95 -      7576 ATCCCAGGCACTCACCCTCTCGTGCGGAGGAAACGCAGCACACAAAC---------------GC---ATGT-GGTGTGGTA--AGGA-----GA-G-TGTAACAGGCAGAAG---G--G-AGAGAG--GAG-----------------------------------------------------
i Saguinus_mystax.k141_4699220                           C 0 I 14
s Saimiri_boliviensis.NW_024100920.1                     119952259  89 - 121099817 ATGCCAGGCACTCACCCTCTCGTGCGGAGAAAATGAATCCCACAAAT---------------GC---ATGTGAGTGGGTTA--AGGA-----AA-G-TGTAATAGGCAGCAGAAGG--------------------------------------------------------------------
i Saimiri_boliviensis.NW_024100920.1                     C 0 I 15
s Saimiri_cassiquiarensis.k141_2188234                       24601  89 +     46362 ATGCCAGGCACTCACCCTCTCGTGCGGAGAAAATGAATCCCACAAAC---------------AC---ATGTGAGTGGGTTA--AGGA-----AA-G-TGTAATAGGCAGCAGAAGG--------------------------------------------------------------------
i Saimiri_cassiquiarensis.k141_2188234                   C 0 I 15
s Saimiri_macrodon.k141_716185                               24696  89 +     45824 ATGCCAGGCACTCACCCTCTCGTGCGGAGAAAATGAATCCCACAAAC---------------AC---ATGTGAGTGGGTTA--AGGA-----AA-G-TGTAATAGGCAGCAGAAGG--------------------------------------------------------------------
i Saimiri_macrodon.k141_716185                           C 0 I 15
s Saimiri_oerstedii.k141_1487881                             41375  89 -     64574 ATGCCAGGCACTCACCCTCTCGTGCGGAGAAAATGAATCCCACAAAC---------------GC---ATGTGAGTGGGTTA--AGGA-----AA-G-TGTAATAGGCAGCAGAAGG--------------------------------------------------------------------
i Saimiri_oerstedii.k141_1487881                         C 0 I 15
s Saimiri_sciureus.k141_2278166                               4448  89 -     23631 ATGCCAGGCACTCACCCTCTCGTGCGGAGAAAATGAATCCCACAAAT---------------GC---ATGTGAGTGGGTTA--AGGA-----AA-G-TGTAATAGGCAGCAGAAGG--------------------------------------------------------------------
i Saimiri_sciureus.k141_2278166                          C 0 I 15
s Saimiri_ustus.k141_1484609                                 24592  89 -     61129 ATGCCAGGCACTCACCCTCTCGTGCGGAGAAAATGAATCCCACAAAC---------------AC---ATGTGAGTGGGTTA--AGGA-----AA-G-TGTAATAGGCAGCAGAAGG--------------------------------------------------------------------
i Saimiri_ustus.k141_1484609                             C 0 I 15
s Sapajus_apella.ctg103                                    5421933  89 -   5703754 ATACCAGGCACTCACCCTCTCGTGCGGAGAAAATGAAGCCCACAGAC---------------GC---ATGTGGGTGGCTTA--AGGA-----AC-G-TGTAACGGGCAGAAGAAGG--------------------------------------------------------------------
i Sapajus_apella.ctg103                                  C 0 I 15
s Sapajus_macrocephalus.k141_351809                          57174  89 -     80660 ATACCAGGCACTCACCCTCTCGTGCGGAGAAAATGAAGCCCACAGAC---------------GC---ATGTGGGTGGGTTA--AGGA-----AC-G-TGTAACGGGCAGAAGAAGG--------------------------------------------------------------------
i Sapajus_macrocephalus.k141_351809                      C 0 I 15
s Semnopithecus_entellus.k141_1672505                         1327 149 -     12572 ataccaggggttcatcctctcgtgttgagaaaattaaggacacaaac---------------ac---atgtgggtgggt--taaggagtggaaa-g-ttcaataggcagaagaaag--g-agag--aggagagccgctccaggt--g--acagag--agg-tgtcctaaa-gggggacggtgtc
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      28179 149 +     39453 ataccaggggttcatcctctcgtgttgagaaaattaaggacaggaac---------------ac---atgtgggtgggt--taaggagtggaaa-g-ttcaataggcagaagaaag--g-agag--aggagagccgctccaggt--g--acagag--agg-tgtcctaaa-gggggacggtgtc
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            8687 149 +     27826 ataccaggggttcatcctctcgtgctgagaaaattaaggacacgaac---------------ac---atgtgggtgggt--taaggagtggaaa-g-ttcaataggcagaagaaag--g-agag--aggagagccgctccaggt--g--acagag--agg-tgtcctaaa-gggggacggtgtc
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             8221 149 -     19483 ataccaggggttcatcctctcgtgttgagaaaattaaggacaggaac---------------ac---atgtgggtgggt--taaggagtggata-g-ttcaataggcagaagaaag--g-tgag--aggagagccgctccaggt--g--acagag--agg-tgtcctaaa-gggggacggtgtc
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      1526 149 -     12762 ataccaggggttcatcctctcgtgttgagaaaattaaggacacaaac---------------ac---atgtgggtgggt--taaggagtggaaa-g-ttcaataggcagaagaaag--g-agag--aggagagccgctccaggt--g--acagag--agg-tgtcctaaa-gggggacggtgtc
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           1373 149 +     13763 ataccaggggtttatcctctcgtgttgagaaaattaaggacacgaac---------------ac---atgtgggtgggt--taaggagtggaaa-g-ttcaataggcagaagaaag--g-agag--aggagagccgctccaggt--g--acagag--agg-tgtcctaaa-gggggacggtgtc
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Theropithecus_gelada.CM009954.1                        186429851 147 + 186847797 ataccaggggttcatcccctcatgctgagaaaattaaggacacgaac---------------ac---atgTGGGTGGGT----AGGAGTGGAAA-G-TTCaataggcagaagaaag--g-agagag--gagagctgCTCCTTGT--G--AGAGAG--AGG-TGTCCTAAA-GGGGGACGGTGTC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                         12272 149 -     20410 ataccaggggttcatcctctcgtgttgagaaaattaaggacacgaac---------------ac---atgtgggtgggt--taaggagtggaaa-g-ttcaataggcagaagaaag--g-agag--aggagagccgctccaggt--g--acagag--agg-tgtcctaaa-gggggacggtgtc
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      1388 149 -     12674 ataccaggggttcatcctctcgtgttgagaaaattaaggacacgaac---------------ac---atgtgggtgggt--taaggagtggaaa-g-ttcaataggcagaagaaag--g-agag--aggagagccgctccaggt--g--acagag--agg-tgtcctaaa-gggggacggtgtc
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       12379 149 +     19930 ataccaggggttcatcctctcgtgttgagaaaattaaggacacgaac---------------ac---atgtgggtgggt--taaggagtggaaa-g-ttcaataggcagaagaaag--g-agag--aggagagccgctccaggt--g--acagag--agg-tgtcctaaa-gggggacggtgtc
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       8776 149 -     19997 ataccaggggttcatcctctcgtgttgagaaaattaaggacacgaac---------------ac---atgtgggtgggt--taaggagtggaaa-g-ttcaataggcagaagaaag--g-agag--aggagagccgctccaggt--g--acagag--agg-tgtcctaaa-gggggacggtgtc
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            48921 149 -     60166 ataccaggggttcatcctctcgtgttgagaaaattaaggacacgaac---------------at---atgtgggtgggt--taaggaatggaaa-g-ttcaataggcagaagaaag--g-agag--aggagagccgctccaggt--g--acagag--agg-tgtcctaaa-gggggacggtgtc
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        16383 149 -     27529 ataccaggggttcatcctctcgtgttgagaaaattaaggacacgaac---------------ac---atgtgggtgggt--taaggagtggaaa-g-ttcaataggcagaagaaag--g-agag--aggagagccgctccaggt--g--acagag--agg-tgtcctaaa-gggggacggtgtc
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     16333 149 -     18194 ataccaggggttcatcctctcgtgttgagaaaattaaggacacgaac---------------ac---atgtgggtgggt--taaggagtggaaa-g-ttcaataggcagaagaaag--g-agag--aggagagccgctccaggt--g--acagag--agg-tgtcctaaa-gggggacggtgtc
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                          10045 149 -     21137 ataccaggggttcatcctctcgtgttgagaaaattaaggacacgaac---------------ac---atgtgggtgggt--taaggagtggaaa-g-ttcaataggcagaagaaag--g-agag--aggagagccgctccaggt--g--acagag--agg-tgtcctaaa-gggggacggtgtc
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    8746 149 -     10723 ataccaggggttcatcctctcgtgttgagaaaattaaggacacgaac---------------ac---atgtgggtgggt--taaggagtggaaa-g-ttcaataggcagaagaaag--g-agag--aggagagccgctccaggt--g--acagag--agg-tgtcctaaa-gggggacggtgtc
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         7922 149 +      9834 ataccaggggttcatcctctcgtgttgagaaaattaaggacacgaac---------------ac---atgtgggtgggt--taaggagtggaaa-g-ttcaataggcagaagaaag--g-agag--aggagagccgctccaggt--g--acagag--agg-tgtcctaaa-gggggacggtgtc
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        26245 149 +     32220 ataccaggggttcatcctctcgtgttgagaaaattaaggacacgaac---------------ac---atgtgggtgggt--taaggagtggaaa-g-ttcaataggcagaagaaag--g-agag--aggagagccgctccaggt--g--acagag--agg-tgtcctaaa-gggggacggtgtc
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5940341 150 +   6242583 ataccaggggttcatcctctcgtgttgagaaaattaaggacacgaac---------------ac---atgtgggtgggt--taaggagtgcctt-tcttcaataggcagaagaaag--g-agag--aggagagccgctccaggt--g--acagag--agg-tgtcctaaa-gggggacggtgtc
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        9594 149 +     20839 ataccaggggttcatcctctcgtgttgagaaaattaaggacacgaac---------------ac---atgtgggtgggt--taaggagtggaaa-g-ttcaataggcagaagaaag--g-agag--aggagagccgctccaggt--g--acagag--agg-tgtcctaaa-gggggacggtgtc
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881  13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441   0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202   0 +      8798 C
e Galago_senegalensis.k141_631886                             7400   0 +     11339 C
e Galago_moholi.ctg2040                                     429710   0 -    453645 C
e Mus_pahari.LT608297.1                                   31356171  20 -  89631738 I
e Mus_spretus.CM004101.1                                  90753558  20 - 130317789 I
e Mus_musculus.chr8                                       87651497  20 - 129401213 I
e Mus_caroli.LT608237.1                                   84362512  20 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476  16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445   0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734   0 -     33856 C
e Perodicticus_potto.k141_1186926                              597   0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219   0 -      3244 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      16031  16 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Xerus_inauris.XerIna_scaffold_2302                          2289  11 +    224448 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 12422 320 -     43706 T
e Vicugna_pacos.KN270157.1                                 5372964  16 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851580  13 -   5085361 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   54478  14 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15739083  18 +  33153633 I
e Tupaia_tana.TupTan_flattened_line_97126                    10418  13 -     10553 I
e Tupaia_chinensis.KB320699.1                              2156971  13 +   4065304 I
e Trichechus_manatus.JH594705.1                            4294941  30 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_40725                     797  18 +     27266 I
e Tonatia_saurophila.TonSau_scaffold_294                     82385  30 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   7580  14 +      8208 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              106564  10 +    114563 I
e Tarsius_wallacei.k141_254427                                1877   3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080   3 +     70052 I
e Tapirus_terrestris.TapTer_scaffold_755                    388291  19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821  19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73860  14 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                12005  18 +     41958 I
e Symphalangus_syndactylus.tarseq_199                      1093192   0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6812310   9 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629              19505  15 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             32197  13 +     97271 I
e Spermophilus_dauricus.KZ294078.1                         1955257  36 -   3870691 I
e Sorex_araneus.JH798187.1                                13652179  20 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4928   8 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_42075                     1435  20 -     30804 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    154382  15 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                89023  18 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        368189  17 -   3329780 I
e Rattus_norvegicus.chr16                                 53571726  38 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  6452  13 +     55207 I
e Puma_concolor.QAVW01001104.1                            20275474  22 -  38429054 I
e Pteropus_vampyrus.KN534172.1                                8028  12 -      8028 I
e Pteropus_alecto.KB030862.1                              22977975  18 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         41723  13 +     42204 I
e Pteronotus_parnellii.KE909381.1                            16321  33 -     21811 I
e Psammomys_obesus.NESX01036370.1                            11540  20 -     21651 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790  14 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35577  18 +     35617 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             2956  18 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9883  18 +     63832 I
e Petromus_typicus.PetTyp_scaffold_42190                     29272  10 -     29689 I
e Peromyscus_maniculatus.KI615324.1                       18195914  20 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690  60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13820  11 -     78924 I
e Pantholops_hodgsonii.KE114653.1                          1265873  11 -   2937107 I
e Panthera_tigris.KE722367.1                               4722402  24 -   8748460 I
e Panthera_pardus.KV860321.1                                265522  24 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  152313  24 +    230217 I
e Ovis_canadensis.OviCan_scaffold_2572                      174955  25 -    191736 I
e Ovis_aries.CM001607.2                                   17586978  17 +  44047080 I
e Otocyon_megalotis.JAEUCK010005147.1                       463984 325 -    559221 T
e Oryctolagus_cuniculus.CM000791.1                        67148837  19 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271  14 -     18566 I
e Orcinus_orca.KB316932.1                                  2782838  18 -  10937097 I
e Onychomys_torridus.OnyTor_scaffold_2986                    81338  20 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   26299  20 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77710  15 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         145831   4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              507863  13 -   2017862 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Ochotona_princeps.JH802162.1                             1365383  19 +   3988456 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869   0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414   0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947   0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9150892 182 -   9404916 T
e Noctilio_leporinus.NocLep_scaffold_251                    759056  18 +    783361 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866929  18 +   7148211 I
e Neomonachus_schauinslandi.NINY01007730.1                20308720  13 +  31847680 I
e Nannospalax_galili.KL204047.1                            2035666   6 -   3037898 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190475  14 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_281845                        1174  18 +      1835 I
e Myotis_lucifugus.GL429869.1                              3905022  18 -   4330536 I
e Myotis_davidii.KB100139.1                                1588925  18 -   6019432 I
e Myotis_brandtii.KE162005.1                                281670  16 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     72319  10 -     80779 I
e Mustela_putorius.JH418006.1                               302916  13 -  14710649 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           8028  18 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398   7 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1878   9 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 142833  33 -    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27960  18 -    437263 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7127  13 -      8324 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             35221   4 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1851541   4 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11261648  20 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                17041  33 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593  14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    4451  18 +     10310 I
e Mesocricetus_auratus.KB708134.1                         12183350  20 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 33894  20 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365             11521  13 +     13704 I
e Megaderma_lyra.MegLyr_scaffold_4542                        14530  18 -    207569 I
e Marmota_marmota.CZRN01000018.1                          33104398  36 -  40650429 I
e Manis_pentadactyla.KN006162.1                              51430  45 -    317179 I
e Manis_javanica.JSZB01003497.1                              19444  13 +    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_8222                 91834  18 +     94391 I
e Lycaon_pictus.CM007581.1                                17956957 950 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653  30 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268845  18 -    662738 I
e Lepus_americanus.LepAme_scaffold_107385                     7936  19 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044260  13 +   3914936 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Lasiurus_borealis.LasBor_scaffold_50988                    16348  23 +     29960 I
e Kogia_breviceps.KogBre_flattened_line_192630                3156  18 -      3359 I
e Jaculus_jaculus.JH725527.1                               8278294  16 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_48101               23781  18 +     23964 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7522111  36 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      84244  10 +    135385 I
e Hylobates_pileatus_a.tarseq_633                            3336052   0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157   0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374   0 +     14092 C
e Hylobates_agilis.k141_232023                                2330   0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  46186  26 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_101188                274  17 +      9903 I
e Hipposideros_armiger.JXIK01000431.1                       111703  17 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577   3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337  14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20663359  10 +  22651954 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 19003  19 +     36099 I
e Helogale_parvula.HelPar_flattened_line_2585               243500  20 +    327341 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Graphiurus_murinus.GraMur_scaffold_10447                   33784  11 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            32101  11 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609797  17 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_108840               2625  14 -      9135 I
e Galagoides_demidoff.k141_1711393                            4689   0 +     41679 C
e Fukomys_damarensis.KN121974.1                             851588   3 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                 10705  24 -     36744 I
e Felis_catus_fca126.CM031415.1                           20196951  24 + 205367284 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Eubalaena_japonica.EubJap_flattened_line_31514             26195  18 -     44125 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           12242  18 +    133382 I
e Erinaceus_europaeus.JH835339.1                           3329391  13 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467  19 +    498745 I
e Equus_caballus.CM000403.2                               18532438  19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631  19 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2146933  18 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16330809  13 -  41312741 I
e Ellobius_talpinus.LOJH01081419.1                            1571  20 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          21665  20 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311832  13 +    607251 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    37538  10 +     67921 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115  19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363  19 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8631289  33 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812577  18 +  35494412 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64708  14 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  37007  10 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838258   8 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             29655  20 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_37019               4120  20 -     19598 I
e Cricetulus_griseus.LT883664.1                           11668649  21 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 51209  20 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           1672  18 +     23735 I
e Condylura_cristata.JH655891.1                           17549224  15 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1254065  10 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1687  14 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542  19 -     25243 I
e Cephalopachus_bancanus.k141_1423433                         6085   3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     94740   9 +    217609 I
e Castor_canadensis.CasCan_scaffold_2074                    138470  15 +    179628 I
e Carollia_perspicillata.CarPer_scaffold_92756                6282  30 -     11696 I
e Carlito_syrichta.NW_007259797.1                           156587   3 -    496798 I
e Capromys_pilorides.CapPil_scaffold_65020                    2136  10 -     12242 I
e Capra_hircus.CM004588.1                                 18061518  11 -  44709034 I
e Capra_aegagrus.CM003241.1                               18830798  11 +  46296322 I
e Canis_lupus_orion.HG994398.1                            18502019 950 +  63665305 I
e Canis_lupus_familiaris.chr16                            17960717 950 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9036246 952 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     1546 950 -     43241 I
e CanFam4.chr16                                           17800803 952 -  60362399 I
e Camelus_ferus.KB017975.1                                  404222  16 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2335923  16 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10003447  16 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2820170  21 +   4408762 I
e Bos_taurus.CM000184.6                                   18200538  21 - 114055384 I
e Bos_mutus.JH880303.1                                     1126420  17 -   1948126 I
e Bos_indicus.CM003028.1                                  18363564  21 - 116941312 I
e Bison_bison.KN261452.1                                    200679  13 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    27602  14 +     34529 I
e Balaenoptera_bonaerensis.DF707048.1                         3395  18 -     18090 I
e Balaenoptera_acutorostrata.KI537508.1                   15192930  18 +  23207421 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  5924  48 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         538   0 +      5281 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      13823  11 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             99169  11 -    100397 I
e Anoura_caudifer.AnoCau_scaffold_1412                      186541  33 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676680  15 -   2318259 I
e Allactaga_bullata.AllBul_scaffold_9566                     75595  13 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             80852  13 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9511778  13 -  29979442 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     71931  20 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           828466  23 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       8222 323 +     62944 agaccaca-------g--------------------------caga-gttt-ataggtaggcttga-gg-aggtggtgtc-tgctttcc-ctagggctcatggattggcttgaccaggtgggacgttt-acatagcaggcggggaaggctggta-gtcccaccctaatcttattatgcaaatggactttccacttgaccttcaccatcttgtctgctccttacaataGA-GTGGCTGGCAaaaagaga--aaatggagccaccattttgaacatgcctagcccaggtagtacataactat-gggcac--------aattgctggcattcacccatgcaagctttcagcttgcttgtttatgtctgtagcttgattt
s Allenopithecus_nigroviridis.k141_3361533                   16137 323 -     52922 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acgtaacaggcggggaaggcaggta-gtcccaccctaatcttattactgaaataggctttccacttgaccttcaccatcttgtctgctccttactgtaca-gtggctcgcaaaaagaga--aaatagagccaccaccttgaacatgcctagtccaggtagtacattactat-gggcac--------aattgctggcagttacccatgcaagctttcagcttccttgtttatgtctgcagcttgattt
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         16051 323 -     28001 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atggggcacatggattggcttgactaggtgtgacattt-acgtaacaggcggggaaggcaggta-gtcccaccctaatcttattactgaaataggctttccacttgaccttcaccatcttgtctgctccttactgtaca-gtggttcgcaaaaagaga--aaatggagccaccaccttgaacatgcctagtccaggtggtacattactat-gggcac--------aattgctggcagttacccatgcaagctttcagcttccttgtttatgtctgcagcttgattt
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          6551 323 -     18505 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atggggcacatggattggcttgactaggtgtgacattt-acgtaacaggcggggaaggcaggta-gtcccaccctaatcttattactgaaataggctttccacttgaccttcaccatcttgtctgctccttactgtaca-gtggctcgcaaaaagaga--aaatggagccaccaccttgaacatgcctagtccaggtggtacattactat-gggcac--------aattgctggcagttacccatgcaagctttcagcttccttgtttatgtctgcagcttgattt
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           7403 321 -     12518 agcccaca-------g--------------------------cgga-tttt-ataggcaggtttga-gg-aggtggtgtc-tgctttcc-atggggcacatggattggcttgactaggtgtgacattt-acgtaacaggcggggaaggcaggta-gtcccaccctaatcttattactgaaacaggctttccacttgaccttcaccatcttgtctgctccttactgtaca-gtggctcgcaaaaagaga--aaatggagccaccaccttgaacatgcctagtccaggtggtacattactat-ggacac--------aattgctggcagttacccatgcaagctttcagcttccttgtt--tgtctgcagcttgattt
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              8954 264 +     51355 -gaccaca-------g--------------------------caga-tttt-ataggcaggcttga-g-gaggcagtgtt-tgatctcc-acagggctcgtggattggcctgaccaggtgtgacgtgt-acacagcaggtgggaaaggctggta-gtcccccccaa----cattatgcaaatgggctttccacttgacctgtgc-atcctgtctgctccttactgcacatgtggctggcaaaaagaga--agagggagccaccatcttgaaattgcctagcccAGGTAGTAACTTACTAC-GGACAC--------AACTGC--T----------------------------------------------------
i Alouatta_belzebul.k141_3560514                         I 3 C 0
s Alouatta_caraya.k141_1701091                                2063 264 -     36483 -gaccaca-------g--------------------------caga-tttt-ataggcaggcttga-g-gaggcagtgtt-tgatctcc-acagggctcgtggattggcctgaccaggtgtgacatgt-acacagcaggtgggaaaggctggta-gtcccccccaa----cattatgcaaatgggctttccacttgacctgtgc-atcctgtctgctccttactgcacatgtggctggcaaaaagaga--agagggagccaccatcttgaaattgcctagcccAGGTAGTAACTTACTAC-GGACAC--------AACTGC--T----------------------------------------------------
i Alouatta_caraya.k141_1701091                           I 3 C 0
s Alouatta_discolor.k141_566626                              12515 264 +     28687 -gaccaca-------g--------------------------caga-tttt-ataggcaggcttga-g-gaggcagtgtt-tgatctcc-acagggctcgtggattggcctgaccaggtgtgacgtgt-acacagcaggtgggaaaggctggta-gtcccccccaa----cattatgcaaatgggctttccacttgacctgtgc-atcctgtctgctccttactgcacatgtggctggcaaaaagaga--agagggagccaccatcttgaaattgcctagcccAGGTAGTAACTTACTAC-GGACAC--------AACTGC--T----------------------------------------------------
i Alouatta_discolor.k141_566626                          I 3 C 0
s Alouatta_juara.k141_1302312                                 1028 169 +     27940 -gaccaca-------g--------------------------caga-tttt-ataggcaggcttga-g-gaggcagtgtt-tgatctcc-acagggctcgtggattggcctgaccaggtgtgacgtgt-acacagcaggtgggaaaggctggta-gtcccccccaa----cattatgctaatgggctttccacttgacctgtgc-atcctgtctgc----------------------------------------------------------------------------------------------------------------------------------------------------------------
i Alouatta_juara.k141_1302312                            I 3 I 57
s Alouatta_macconnelli.k141_918386                            2072 262 -      9457 -gaccaca-------g--------------------------caga-tttt-ataggcaggcttga-g-gaggcagt--t-tgatctcc-acagggctcgtggattggcctgaccaggtgtgacgtgt-acacagcaggtgggaaaggctggta-gtcccccccaa----cattatgcaaatgggctttccacttgacctgtgc-atcctgtctgctccttactgcacatgtggctggcaaaaagaga--agagggagccaccatcttgaaattgcctagcccAGGTAGTAACTTACTAC-GGACAC--------AACTGC--T----------------------------------------------------
i Alouatta_macconnelli.k141_918386                       I 3 C 0
s Alouatta_nigerrima.k141_1929159                             1028 264 +     30492 -gaccaca-------g--------------------------caga-tttt-ataggcaggcttga-g-gaggcagtgtt-tgatctcc-acagggctcgtggattggcctgaccaggtgtgacgtgt-acacagcaggtgggaaaggctggta-gtcccccccaa----cattatgcaaatgggctttccacttgacctgtgc-atcctgtctgctccttactgcacatgtggctggcaaaaagaga--agagggagccaccatcttgaaattgcctagcccAGGTAGTAACTTACTAC-GGACAC--------GACTGC--T----------------------------------------------------
i Alouatta_nigerrima.k141_1929159                        I 3 C 0
s Alouatta_palliata.k141_2135620                              5023 264 +     47717 -gaccaca-------g--------------------------caga-tttt-ataggcaggcttga-g-gaggcagtgtt-tgatctcc-acagggctcgtggattggcctgaccaggtgtgacgtgt-acacagcaggtgcgaaaggctggta-gtcccccccaa----cattatgcaaatgggctttccacttgacctgtgc-atcctgtctgctccttactgcacatgtggttggcaaaaagaga--agagggagccaccatcttgaaattgcctagcccAGGTAGTAACTTACTAC-GGACAC--------GACTGC--T----------------------------------------------------
i Alouatta_palliata.k141_2135620                         I 3 C 0
s Alouatta_puruensis.k141_362188                              1755 264 +      5663 -gaccaca-------g--------------------------caga-tttt-ataggcaggcttga-g-gaggcagtgtt-tgatctcc-acagggctcgtggattggcctgaccaggtgtgacgtgt-acacagcaggtgggaaaggctggta-gtcccccccaa----cattatgcaaatgggctttccacttgacctgtgc-atcctgtctgctccttactgcacatgtggctggcaaaaagaga--agagggagccaccatcttgaaattgcctagcccAGGTAGTAACTTACTAC-GGACAC--------AACTGC--T----------------------------------------------------
i Alouatta_puruensis.k141_362188                         I 3 C 0
s Alouatta_seniculus.k141_117119                             16207 264 +     50774 -gaccaca-------g--------------------------caga-tttt-ataggcaggcttga-g-gaggcagtgtt-tgatctcc-acagggctcgtggattggcctgaccaggtgtgacgtgt-acacagcaggtgggaaaggctggta-gtcccccccaa----cattatgcaaatgggctttccacttgacctgtgc-atcctgtttgctccttactgcacatgtggctggcaaaaagaga--agagggagccaccgtcttgaaattgcctagcccAGGTAGTAACTTACTAC-GGACAC--------AACTGC--T----------------------------------------------------
i Alouatta_seniculus.k141_117119                         I 3 C 0
s Aotus_azarae.k141_3104676                                  17199   2 -     33861 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CG-----------------------------------------------------
i Aotus_azarae.k141_3104676                              I 2 I 57
s Aotus_griseimembra.k141_2240599                            17197   2 -     34016 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CG-----------------------------------------------------
i Aotus_griseimembra.k141_2240599                        I 2 I 57
s Aotus_nancymaae.KZ198451.1                               4299624   2 -   5030052 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CG-----------------------------------------------------
i Aotus_nancymaae.KZ198451.1                             I 2 I 57
s Aotus_trivirgatus.k141_2152450                             17233   2 -     34685 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CG-----------------------------------------------------
i Aotus_trivirgatus.k141_2152450                         I 2 I 57
s Aotus_vociferans.k141_344750                               30357   2 -     47192 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------cg-----------------------------------------------------
i Aotus_vociferans.k141_344750                           I 2 I 57
s Ateles_geoffroyi_b.tarseq_1536                             21209220 264 -  21539123 -GGTGACA-------G--------------------------CATa-tttt-ataggcaggcttgagg--aggcagtgtt-tgatctcc-acagggctcgtggattggcctgaccaggtgtgacgtgt-acacggcaggtgggaaaggctggta-gtcccccccaa----cattatgcaaatggactttccacttgacctgtgc-atcttgtctgctccttactgtacacgtgactggcaaaaagaga--agagggagccaccatcttgaaattgcctagcccaggtagtaacttactat-ggacac--------aactgc--t----------------------------------------------------
i Ateles_geoffroyi_b.tarseq_1536                            N 0 C 0
s Ateles_belzebuth.k141_445860                               44026 254 -     48001 -GGTGACA-------G--------------------------caga-tttt-ataggcagtcttgagg--aggca-----------tcc-acagggctcgtggattggcctgaccaggtgtgacgtgt-acacggcaggtgggaaaggctggta-gtcccccccaa----cattatgcaaatggactttccacttgacctgtgc-atcttgtctgctccttactgtacacgtgactggcaaaaagaga--agagggaaccaccatcttgaaattgcctagcccaggtagtaacttactat-ggacac--------aactgc--t----------------------------------------------------
i Ateles_belzebuth.k141_445860                           N 0 C 0
s Ateles_chamek.k141_1806455                                 26820 264 -     30947 -GGTGACA-------G--------------------------caga-tttt-ataggcaggcttgagg--aggcagtgtt-tgatctcc-acagggctcgtggattggcctgaccaggtgtgacgtgt-acacggcaggtgggaaaggctggta-gtcccccccaa----cattatgcaaatggactttccacttgacctgtgc-gtcttgtctgctccttactgtacacgtgactggcaaaaagaga--agagggagccaccatcttgaaattgcctagcccaggtagtaacttactat-ggacac--------aactgc--t----------------------------------------------------
i Ateles_chamek.k141_1806455                             N 0 C 0
s Ateles_geoffroyi_a.k141_833924                                8592 264 -     89868 -GGTGACA-------G--------------------------CATa-tttt-ataggcaggcttgagg--aggcagtgtt-tgatctcc-acagggctcgtggattggcctgaccaggtgtgacgtgt-acacggcaggtgggaaaggctggta-gtcccccccaa----cattatgcaaatggactttccacttgacctgtgc-atcttgtctgctccttactgtacacgtgactggcaaaaagaga--agagggagccaccatcttgaaattgcctagcccaggtagtaacttactat-ggacac--------aactgc--t----------------------------------------------------
i Ateles_geoffroyi_a.k141_833924                           N 0 C 0
s Ateles_marginatus.k141_803263                              12976 264 -     40414 -GGTGACA-------G--------------------------caga-tttt-ataggcaggcttgagg--aggcagtgtt-tgatctcc-acagggctcgtggattggcctgaccaggtgtgacgtgt-acacggcaggtgggaaaggctggta-gtcccccccaa----cattatgcaaatggactttccacttgacctgtgc-gtcttgtctgctccttactgtacacgtgactggcaaaaagaga--agagggagccaccatcttgaaattgcctagcccaggtagtaacttactat-ggacac--------aactgc--t----------------------------------------------------
i Ateles_marginatus.k141_803263                          N 0 C 0
s Ateles_paniscus.k141_457735                                20865 264 +     72325 -GGTGACA-------G--------------------------caga-tttt-ataggcaggcttgagg--aggcagtgtt-tgatctcc-acagggcttgtggattggcctgaccaggtgtgacgtgt-acacggcaggtgggaaaggctggta-gtcccccccaa----cattatgcaaatggactttccacttgacctgtgc-gtcttgtctgctccttactgtacacgtgactggcaaaaagaga--agagggagccaccatcttgaaattgcctagcccaggtagtaacttactat-ggacac--------aactgc--t----------------------------------------------------
i Ateles_paniscus.k141_457735                            N 0 C 0
s Cacajao_ayresi.k141_552049                                104567  24 -    122966 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCGAAAAG-AAAAAG--------AACCGTTAT----------------------------------------------------
i Cacajao_ayresi.k141_552049                             N 0 T 2955
s Cacajao_calvus.k141_5142                                   64070  24 +     81800 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCGAAAAG-AAAAAG--------AACCGTTAT----------------------------------------------------
i Cacajao_calvus.k141_5142                               N 0 T 2953
s Cacajao_hosomi.k141_81245                                  33252  24 -     95584 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCGAAAAG-AAAAAG--------AACCGTTAT----------------------------------------------------
i Cacajao_hosomi.k141_81245                              N 0 T 2955
s Cacajao_melanocephalus.k141_619699                         57352  24 -    119600 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCGAAAAG-AAAAAG--------AACCGTTAT----------------------------------------------------
i Cacajao_melanocephalus.k141_619699                     N 0 T 2954
s Callibella_humilis.k141_10318                                961   2 +     27907 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------cg-----------------------------------------------------
i Callibella_humilis.k141_10318                          I 2 I 57
s Callimico_goeldii.k141_737284                                602   2 -     31217 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CG-----------------------------------------------------
i Callimico_goeldii.k141_737284                          I 2 I 57
s Callithrix_geoffroyi.k119_69176                              897   2 +      5377 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-----------------------------------------------------
i Callithrix_geoffroyi.k119_69176                        I 2 I 57
s Callithrix_jacchus.pat_scaffold_3                       23592758   2 - 189096842 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-----------------------------------------------------
i Callithrix_jacchus.pat_scaffold_3                      I 2 I 57
s Callithrix_kuhlii.k119_1168854                              1572   2 -     12329 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-----------------------------------------------------
i Callithrix_kuhlii.k119_1168854                         I 2 I 57
s Cebuella_pygmaea.k141_793006                                 598   2 -     15088 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG-----------------------------------------------------
i Cebuella_pygmaea.k141_793006                           I 2 I 57
s Cebus_albifrons.Contig27                                25654079   2 +  26074798 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CG-----------------------------------------------------
i Cebus_albifrons.Contig27                               I 15 I 56
s Cebus_olivaceus.k141_1764483                                2017   2 +     28840 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CG-----------------------------------------------------
i Cebus_olivaceus.k141_1764483                           I 15 I 56
s Cebus_unicolor.k141_1837183                                 1746   2 +     14051 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CG-----------------------------------------------------
i Cebus_unicolor.k141_1837183                            I 15 I 56
s Cercocebus_atys.KQ010504.1                               4477068 328 +   4669795 AGACCACA-------G--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctTTCC-ATAGGGCACATGGATTGGCTTGACTAGGTGTGACATTT-ACATAACAGGCGGGGAAGGCAGGTA-gtcccaccctaatcttattactGAAATAGGCTTTCCACTTGACCTtcaccatcttgtctgctccttactgtaca-gtGGCTCGCAAAA--AGA--AAATGGAGCCACCACCTTGAACATGCCTAGTCCAGGTAGTACATTACTAT-GG-TACTGTATGGTAACTGCTGGCAGTTACCCATGCAAGCTTTCAGCTTCCTTGTttatgtctgcagcttgattt
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        1570 321 +     17872 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacactt-atgtaacaggcggggaaggcaggta-gtcccaccctaatcttattactgaaataggctttccacttgaccttcaccatcttgtctgctccttactgtaca-gtggctcgcaaaa--aga--aaatggagccaccaccttgaacatgcctagtccaagtagtacattactat-gggcac--------aattgctggcagttacccatgcaagctttcggcttccttgtttatgtctgcagcttgattt
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           2159 328 -     14043 agaccaca-------g--------------------------caga-gttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acataacaggtggggaaggcaggta-gtcccaccctaatcttattactgaaataggctttccacttgaccttcaccatcttgtctgctccttactgtaca-gtggctcgcaaaa--aga--aaatggagccaccaccttgaacatgcctagtccaggtagtacattactat-gg-tactgtatggtaactgctggcagttacccatgcaagctttcagcttccttgtttatgtctgcagcttgattt
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          10260 321 +     27781 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-ataaggcacatggattggcttgactaggtgtgacattt-acataacaggtggggaaggcaggta-gtcccaccctaatcttattactgaaataggctttccacttgaccttcaccatcttgtctgctccttactgtaca-gtggctcgcaaaa--aga--aaatggagccaccaccttgaacatgcctagtccaagtagtacattactat-gggcac--------aattgctggcagttacccatgcaagctttcagcttccttgtttatgtctgcagcttgattt
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        10419 322 -     20310 agaccaca-------g--------------------------caga-ttt--ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acgtaacaggcggggaaggcaggta-gtcccaccctaatcttattactgaaataggccttccacttgaccttcaccatcttgtctgctccttcctgtaca-gtggctcgcaaaaagaga--aaatggagccaccaccttgaacatgcctagtccaggtggtacattactat-gggcac--------aattgctggcagttacccatgcaagctttcagcttccttgtttatgtctgcagcttgattt
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          13399 322 +     29689 agaccaca-------g--------------------------caga-ttt--ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acgtaacaggcagggaaggcaggta-gtcccaccctaatcttattactgaaataggccttccacttgaccttcaccatcttgtctgctccttcctgtaca-gtggctcgcaaaaagaga--aaatggagccaccaccttgaacatgcctagtccaggtggtacattactat-gggcac--------aattgctggcagttacccatgcaagctttcagcttccttgtttatgtctgcagcttgattt
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            8149 322 -     20078 agaccaca-------g--------------------------caga-ttt--ataggcaggcttga-gg-gggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acgtaacaggcggggaaggcaggta-gtcccaccctaatcttattactgaaataggccttccacttgaccttcaccatcttgtctgctccttcctgtaca-gtggctcgcaaaaagaga--aaatggagccaccaccttgaacatgcctagtccaggtggtacatgactat-gggcac--------aattgctggcagttacccatgcaagctttccgcttccttgtttatatctgcagcttgattt
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          16071 322 -     27936 agaccaca-------g--------------------------caga-ttt--ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acgtaacaggcggggaaggcaggta-gtcccaccctaatcttattactgaaataggccttccacttgaccttcaccatcttgtctgctccttcctgtaca-gtggctcgcaaaaagaga--aaatggagccaccaccttgaacatgcctagtccaggtagtacattactat-ggacac--------aattgctggcagttacccatgcaagctttcagtttccttgtttatgtctgcagcttgattt
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            4937 318 -     17152 agaccaca-------g--------------------------caga-ttt--ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acgtaacaggcggggaaggcaggta-gtcccaccctaatcttattactgaaataggctttccacttgaccttcaccatcttgtctgctccttactgtaca-gtggctcgcaaaaagaga--aaatggagccaccaccttgaacatgcctagtccaggtagtacattactat-gggcac--------aattgctggcagttacccatgcaagctttcagcttcc----ttatgtctgcagcttgattt
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38818478 322 +  39242232 agaccaca-------g--------------------------caga-ttt--ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acgtaacaggtggggaaggcaggta-gtcccaccctaatcttattactgaaataggccttccacttgaccttcaccatcttgtctgctccttcctgtacg-gtggctcgcaaaaagaga--aaatggagccaccaccttgaacatgcctagtccaggtggtacattactat-gggcaa--------aattgctggcagttacccatgcaagctttcagcttccttgtttatgtctgcagcttgattt
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21224171 318 -  21565898 agaccaca-------g--------------------------caga-ttt--ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acgtaacaggcggggaaggcaggta-gtcccaccctaatcttattactgaaataggctttccacttgaccttcaccatcttgtctgctccttactgtaca-gtggctcgcaaaaagaga--aaatggagccaccaccttgaacatgcctagtccaggtagtacattactat-gggcac--------aattgctggcagttacccatgcaagctttcagcttcc----ttatgtctgcagcttgattt
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       41290 322 -     53127 agaccaca-------g--------------------------caga-ttt--ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acgtaacaggcggggaaggcaggta-gtcccaccctaatcttattactgaaataggctttccacttgaccttcaccatcttgtctgctccttactgtaca-gtggctcgcaaaaagaga--aaatggagccaccaccttgaacatgcctagtccaggtagtacattactat-gggcac--------aattgctggcagttacccatgcaagctttcagcttccttgtttatgtctgcagcttgattt
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        1535 322 +     13442 agaccaca-------g--------------------------caga-ttt--ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acgtaacaggcggggaaggcaggta-gtcccaccctaatcttattactgaaataggccttccacttgaccttcaccatcttgtctgctccttcctgtacg-gtggctcgcaaaaagaga--aaatggagccaccaccttgaacatgcctagtccaggtggtacattactat-gggcac--------aattgctggcagttacccatgcaagctttcagcttccttgtttatgtctgcagcttgattt
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       16086 318 -     27947 agaccaca-------g--------------------------caga-ttt--ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acgtaacaggcggggaaggcaggta-gtcccaccctaatcttattactgaaataggctttccacttgaccttcaccatcttgtctgctccttcctgtaca-gtggctcgcaaaaagaga--aaatggagccaccaccttgaacatgcctagtccaggtagtacattactat-gggcac--------aattgctggcagttacccatgcaagctttcagcttcctt----atgtctgcagcttgattt
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         16062 322 +     17596 agaccaca-------g--------------------------caga-ttt--ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acgtaacaggcggggaaggcaggta-gtcccaccctaatcttattactgaaataggccttccacttgaccttcaccatcttgtctgctccttactgtaca-gtggctcgcaaaaagaga--aaatggagccactaccttgaacatgcctagtccaggtagtacattactat-gggcac--------aattgctggcagttacccatgcaagctttcagcttccttgtttatatctgcagcttgattt
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          2117 323 +     14005 agaccaca-------g--------------------------cagatttt--ataggcaggcttga-gg-gggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acgtaacaggcggggaaggcaggta-gtcccaccctaatcttattactgaaataggccttccacttgaccttcaccatcttgtctgctccttcctgtaca-gtggctcgcaaaaagaga--aaatggagccaccaccttgaacatgcctagtccaggtggtacattactat-tggcac--------aattgctggcagttacccatgcaagctttccgcttccttgtttatatctgcagcttgattt
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chiropotes_albinasus.k141_2206961                           2423  24 -     15524 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTGAAAG-AAAAAG--------AACCGTTAT----------------------------------------------------
i Chiropotes_albinasus.k141_2206961                      I 40 I 2
s Chiropotes_israelita.k141_747660                          101695  24 +    146308 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCGTAAAG-AAAAAG--------AACCGTTAT----------------------------------------------------
i Chiropotes_israelita.k141_747660                       N 0 T 2961
s Chiropotes_sagulatus.k141_1421488                          33502  24 -     50570 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCGTAAAG-AAAAAG--------AACCGTTAT----------------------------------------------------
i Chiropotes_sagulatus.k141_1421488                      N 0 T 2960
s Chlorocebus_aethiops.ctg25                              18430057 323 -  18827391 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-gtagggcacatggattggcttgactaggtgtgacattt-acgtaacaggcggggaaggcaggta-gtcccaccctaatcttattactgaaataggctttccacttgaccttcaccatcttgtctgctccttactgtaca-gtggctcgcaaaaagaga--aaatggagccaccaccttgaacatgcctagtccaggtagtacattactat-gggcac--------aattgctggcagttacccatgcaagctttcagcttccttgtttatgtctgcagcttgattt
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       16491 323 -     50209 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-gtagggcacatggattggcttgactaggtgtgacattt-acgtaacaggcggggaaggcaggta-gtcccaccctaatcttattactgaaataggctttccacttgaccttcaccatcttgtctgctccttactgtaca-gtggctcgcaaaaagaga--aaatggagccaccaccttgaacatgcctagtccaggtagtacattactat-gggcac--------aattgctggcagttacccatgcaagctttcagcttccttgtttatgtctgcagcttgattt
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135423492 323 + 135778131 AGACCACA-------G--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctTTCC-GTagggcacatggattggcttgactaggtgtgacattt-acgtaacaggcggggaaggcAGGTA-gtcccaccctaatcttattactGAAATAGGCTTTCCACTTGACCTtcaccatcttgtctgctccttactgtaca-gtGGCTcgcaaaaagaga--aaatggagccACCACCTTGAACATGCCTAGTCCAGGTAGTACATTACTAT-Gggcac--------aattgctggcagttacccatgcaagctttcagcttcctTGTttatgtctgcagcttgattt
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21206657 323 -  21539334 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acgtaacaggcggggaaggcaggta-gtcccaccctaatcttattactgaaataggctttccacttgaccttcactatcttgtctgctccttactgtaca-gtggctcacaaaaagaga--aaatggagccaccaccttgaacatgcctagtccaggtagtacattactat-gggcac--------aattgctggcagttacccatgcaagctttcagcttccttgtttatgtctgcagcttgattt
i Erythrocebus_patas.Contig38                            C 0 C 0
s Gorilla_beringei.k141_3596273                              17463 323 -     32273 agaccaca-------g--------------------------caga-gttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-ctagggctcatggattggcttgaccaggtgggacattt-acatagcaggtggggaaggctggta-gtcccaccctaatcttattatgcaaatggactttccacttgaccttcaccatcttgtctgctccttacaataca-gtggctggcaaaaagaga--aaatggagccaccactttgaacatgcctagcccaggtagtacattactat-aggcac--------aattgctggcattcactcatgcaagctttcagcttgcttgtttatgtctgtagcttgattt
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186339600 323 + 186649187 agaccaca-------g--------------------------caga-gttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-ctagggctcatggattggcttgaccaggtgggacattt-acatagcaggtggggaaggctggta-gtcccaccctaatcttattatgcaaatggactttccacttgaccttcaccatcttgtctgctccttacaataca-gtggctggcaaaaagaga--aaatggagccaccactttgaacatgcctagcccaggtagtacattactat-aggcac--------aattgctggcattcactcatgcaagctttcagcttgcttgtttatgtctgtagcttgattt
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hoolock_leuconedys.ctg274                                    436271 323 +    630532 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggctcatggattggcttgaccaagtgggacgttt-aggtagcaggtggagaaggctggta-gtcccaccctaatcttattatgcaaatggactttcaacttgaccttcaccatcttgtctgctccttacaataca-gtggctggcaaaaataga--aaatggagccaccactttgaacatgcctagcccaggttgtacattactat-gggcac--------aattgctggcattcacccatgcaagctttcagcttgcttgtttatgtctgcagcttgattt
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         15024 263 -     38430 -GGTGACA-------G--------------------------caga-tttt-ataggcaggcttga-g--aggcagtgtt-tgatctcc-acagggctcgtggattggcctgatcaggtgtgacgtgt-acacggcaggtggcaaaggctggta-gtcccccacaa----cattatgcaaatggactttccacttgacttgtgc-gtcttgtctgctccttactgtacacgtgactggcaaaaagaga--agagggagccaccatcttgaaattgcctagcccaggtagtaacttactat-ggacac--------aactgc--t----------------------------------------------------
i Lagothrix_lagothricha.k141_1005387                     N 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        9336   2 +     64341 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------cg-----------------------------------------------------
i Leontocebus_fuscicollis.k141_1820339                   I 2 I 57
s Leontocebus_illigeri.k141_1304848                           1678   2 -     35062 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------cg-----------------------------------------------------
i Leontocebus_illigeri.k141_1304848                      I 2 I 57
s Leontocebus_nigricollis.k141_4610752                        9365   2 +     35603 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------cg-----------------------------------------------------
i Leontocebus_nigricollis.k141_4610752                   I 2 I 57
s Leontopithecus_chrysomelas.k141_1519602                    30981   2 +     38576 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CG-----------------------------------------------------
i Leontopithecus_chrysomelas.k141_1519602                I 2 I 57
s Leontopithecus_rosalia.k141_464620                         27685   2 +     66356 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CG-----------------------------------------------------
i Leontopithecus_rosalia.k141_464620                     I 2 I 57
s Lophocebus_aterrimus.ctg367                              1438619 321 +   1826925 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-atgtaacagacggggaaggcaggta-gtcccaccctaatcttattactgaaataggctttccacttgaccttcaccatcttgtctgctccttactgtaca-gtggctcgcaaaa--aga--aaatggagccaccaccttgaacatgcctagtccaagtagtacattactat-gggcac--------aattgctggcagttacccatgcaagctttcagcttccttgtttctgtctgcagcttgattt
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                               8432 328 +     40492 agactacagcagacag--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acataacaggcggggaaggcaggta-gtcccaccctaatcttattactggaataggctttccacttgaccttcaccatcttgtctgctccttactgtaca-gtggctcgcaaaa--aga--aaatggagccaccaccttgaacatgcctagtccaggtagcacattactat-gggcac--------aattgctggcagttacccatgcaagctttcagcttccttgtttatgtctgcagcttgattt
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59677693 321 +  60120075 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acataacaggcggggaaggcaggta-gtcccaccctaatcttattactggaataggctttccacttgaccttcaccatcttgtctgctccttactgtaca-gtggctcgcaaaa--aga--aaatggagccaccaccttgaacatgcctagtccaggtagtacattactat-ggggac--------aattgctggcagttacccatgcaagctttcagcttccttgtttatgtctgcagcttgattt
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 14211 321 -     26193 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acataacaggcggggaaggcaggta-gtcccaccctaatcttattactggaataggctttccacttgaccttcaccatcttgtctgctccttactgtaca-gtggctcgcaaaa--aga--aaatggagccaccaccttgaacatgcctagtccaggtagcacattactat-gggcac--------aattgctggcagttacccatgcaagctttcagcttccttgtttatgtctgcagcttgattt
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            81987 321 -    114318 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-acagggcacatggattggcttgactaggtgtgacattt-acataacaggcggggaaggcaggta-gtcccaccctaatcttattactgaaataggctttccacttgaccttcaccatcttgtctgctccttactgtaca-gtggctcgcaaaa--aga--aaatggagccaccaccttgaacatgcctagtccaggtagtacattactat-gggcac--------aattgctggcagttacccatgcaagctttcagcttccttgtttatgtctgcagcttgattt
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  7678 321 -     23192 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acataacaggcggggaaggcaggta-gtcccaccctaatcttattactgaaataggctttccactggaccttcaccatcttgtctgctccttactgtaca-gtggctcgcaaaa--aga--aaatggagccaccaccgtgaatatgcctagtccaggtagcacattactat-gggcac--------aattgctggcagttacccatgcaagatttcagcttccttgcttatgtctgcagcttgattt
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                17142 321 -     29190 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-acagggcacatggattggcttgactaggtgtgacattt-acataacaggcggggaaggcaggta-gtcccaccctaatcttattactgaaataggctttccacttgaccttcaccatcttgtctgctccttactgtaca-gtggctcgcaaaa--aga--aaatggagccaccaccttgaacatgcctagtccaggtagtacattactat-gggcac--------aattgctggcagttacccatgcaagctttcagcttccttgtttatgtctgcagcttgattt
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  25720 321 +     37952 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acataacaggcggggaaggcaggta-gtcccaccctaatcttattactgaaataggctttccacttgaccttcaccatcttgtctgctccttactgtaca-gtggctcgcaaaa--aga--aaatggagccaccaccttgaacatgcctagtccaggtagtacattactat-gggcac--------aattgctggcagttacccatgcaagctttcagcttccttgtttatgtctgcagcttgattt
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186840799 321 + 187317192 AGACCACA-------G--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctTTCC-ATAGGGCACATGGATTGGCTTGACTAGGTGTGACATTT-ACATAACAGGCGGGGAAGGCAGGTA-gtcccaccctaatcttattactGAAATAGGCTTTCCACTTGACCTtcaccatcttgtctgctccttactgtaca-gtGGCTCGCAAAA--AGA--AAATGGAGCCACCACCTTGAACATGCCTAGTCCAGGTAGCACATTACTAT-GGGCAC--------AATTGCTGGCAGTTACCCATGCAAGATTTCAGCTTCCTTGCttatgtctgcagcttgattt
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25459375 321 -  25927173 AGACCACA-------G--------------------------CAGA-TTTT-ATAGgcaggcttga-gg-aggtggtgtc-tgctTTCC-ACagggcacatggattggcttgactaggtgtgacattt-acataacaggcggggaaggcAGGTA-gtcccaccctaatcttattactGAAATAGGCTTTCCACTTGACCTtcaccatcttgtctgctccttactgtaca-gtGGCTCGCAAAA--AGA--AAATGGAGCCACCACCTTGAACATGCCTAGTCCAGGTAGTACATTACTAT-GGGCAC--------AATTGCTGGCAGTTACCCATGCAAGCTTTCAGCTTCCTTGCttatgtctgcagcttgattt
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  81576 321 +     89720 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-acagggcacatggattggcttgactaggtgtgacattt-acataacaggcggggaaggcaggta-gtcccaccctaatcttattactgaaataggctttccacttgaccttcaccatcttgtctgctccttactgtaca-gtggctcgcaaaa--aga--aaatggagccaccaccttgaacatgcctagtccaggtagtacattactat-gggcac--------aattgctggcagttacccatgcaagctttcagcttccttgtttatgtctgcagcttgattt
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 8569 321 +     20474 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acataacaggcggggaaggcaggta-gtcccaccctaatcttattactgaaataggctttccacttgaccttcaccatcttgtctgctccttactgtaca-gtggctcgcaaaa--aga--aaatggagccaccaccttgaacatgcctagtccaggtagtacattactat-gggcac--------aattgctggcagttacccatgcaagctttcagcttccttgcttatgtctgcagcttgattt
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   8366 321 -     14993 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-acagggcacatggattggcttgactaggtgtgacattt-acataacaggcagggaaggcaggta-gtcccaccctaatcttattactgaaataggctttccacttgaccttcaccatcttgtctgctccttactgtaca-gtggctcgcaaaa--aga--aaatggagccaccaccttgaacatgcctagtccaggtagtacattactat-gggcac--------aattgctggcagttacccatgcaagctttcagcttccttgtttatgtctgcagcttgattt
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  331228 321 -    668171 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-acagggcacatggattggcttgactaggtgtgacattt-acataacaggcggggaaggcaggta-gtcccaccctaatcttattactgaaataggctttccacttgaccttcaccatcttgtctgctccttactgtaca-gtggctcgcaaaa--aga--aaatggagccaccaccttgaacatgcctagtccaggtagtacattactat-gggcac--------aattgctggcagttacccatgcaagctttcagcttccttgtttatgtctgcagcttgattt
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 6678 321 -     24072 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acataacaggcggggaaggcaggta-gtcccaccctaatcttattactggaataggctttccacttgaccttcaccatcttgtctgctccttactgtaca-gtggctcgcaaaa--aga--aaatggagccaccaccgtgaacatgcctagtccaggtagcacattactat-gggcac--------aattgctggcagttacccatgcaagatttcagcttccttgtttatgtctgcagcttgattt
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               27309 321 -     45290 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-acagggcacatggattggcttgactaggtgtgacattt-acataacaggcggggaaggcaggta-gtcccaccctaatcttattactgaaataggctttccacttgaccttcaccatcttgtctgctccttactgtaca-gtggctcgcaaaa--aga--aaatggagccaccaccttgaacatgcctagtccaggtagtacattactat-gggcac--------aattgctggcagttacccatgcaagctttcagcttccttgtttatgtctgcagcttgattt
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23938888 321 -  24302211 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-atgtaacaggcggggaaggcaggta-gtcccaccctaatcttattactgaaataggctttccacttgaccttcaccatcttgtctgctccttactgtaca-gtggctcgcaaaa--aga--aaatggagccaccaccttgaacatgcctagtccaggtagtacattactat-gggcac--------aattgctggcagttacccatgcaagctttcagcttccttgtttatgtctgcagcttgattt
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353006 321 +    752769 agaccaca-------g--------------------------caga-tttt-ataggcaggcttaa-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-atgtaacaggcggggaaggcaggta-gtcccaccctaatcttattactgaaataggctttccacttgaccttcaccatcttgtctgctccttactgtaca-gtggctcgcaaaa--aga--aaatggagccaccaccttgaacatgcctagtccaggtagtacattactat-gggcac--------aattgctggcagttacccatgcaagctttcagcttccttgtttatgtctgcagcttgattt
i Mandrillus_sphinx.Contig270                            I 7 C 0
s Mico_argentatus.k141_1024458                                 597   2 -     20047 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-----------------------------------------------------
i Mico_argentatus.k141_1024458                           I 2 I 57
s Mico_humeralifer.k141_1346949                               1010   2 +      1399 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-----------------------------------------------------
i Mico_humeralifer.k141_1346949                          I 2 I 57
s Mico_schneideri.k141_916733                                        597   2 +      5107 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-----------------------------------------------------
i Mico_schneideri.k141_916733                                  I 2 I 57
s Miopithecus_ogouensis.k141_534055                          10568 323 -     28506 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtatgacattt-acgtaacaggcggggaaggcaagta-gtcccaccctaatcttattactgaaataggctttccacttgaccttcaccatcttgtctgctccttactgtaca-gtggctcgcaaaaagaga--aaatggagccaccaccttgaacatgcccagtccaggtggtacattactat-gggcac--------aattgctggcagttacccatgcaagctttcagcttccttgtttatgtctgcagcttgattt
i Miopithecus_ogouensis.k141_534055                      I 53 C 0
s Nasalis_larvatus.k141_413338                               16595 323 +     21681 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgagattt-acataacaggcggggaaggcaggta-gtcccaccctaatcttgttattgaaataggctttccacttgaccttcaccaccttgtctgctccttactgtaca-ctggctcgcaaaaaga--gaaaatggagccaccaccttgaacatgcctagcccaggtagtacattactat-gggcac--------aattgctggcatttacccatgcaagctttcagcttccttgtttatgtctgcagcttgattt
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Pan_paniscus.KQ411613.1                                    45567 323 +     80009 AGACCACA-------G--------------------------CAGA-GTTT-ATAGgcaggcttga-gg-aggtggtgtc-tgctTTCC-CTAGggctcatggattggcttgaccaggtgggacgttt-acatagcaggcggggaaggctgGTA-gtcccaccctaatcttattatgcaaatggacttTCCACTTGACATtcaccatcttgtctgctccttacaaTAGA-GTGGCtggcaaaaagaga--aaatggagccACCACTTTGAACATGCCTAGCCCAGGTAGTACATTACTAT-GGGCAC--------AATTGCtggcattcacccatgcaagcttTCAGCTTGCTTGTTTATGTCTGtagcttgattt
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.KZ622849.1                                 23754 323 +    110857 AGACCACA-------G--------------------------CAGA-GTTt-ataggcaggcttga-gg-aggtggtgtc-tgctTTCC-Ctagggctcatggattggcttgaccaggtgggacattt-acatagcaggcggggaaggctggTA-gtcccaccctaatcttattatgcaaatggacttTCCACTTGACCTTCACcgtcttgtctgctccttacaaTAGA-GTGGCtggcaaaaagaga--aaatggagccACCACTTTGAACATGCCTAGCCCAGGTAGTACATTACTAT-GGGCAC--------AATTGCTggcattcacccatgcaagcttTCAGCTTGCTTGTTTATGTCTGtagcttgattt
i Pan_troglodytes.KZ622849.1                             C 0 I 1003
s Papio_anubis.CM001495.2                                183444692 321 + 183742232 AGACCACA-------G--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctTTCC-ATAGGGCACATGGATTGGCTTGACTAGGTGTGACATTT-ATGTAACAGACGGGGAAGGCAGGTA-gtcccaccctaatcttattactGAAATAGGCTTTCCACTTGACCTtcaccatcttgtctgctccttactgtaca-gtGGCTCGCAAAA--AGA--AAATGGAGCCACCACCTTGAACATGCCTAGTCCAAGTAGTACATTACTAT-GGGCAC--------AATTGCTGGCAGTTACCCATGCAAGCTTTCAGCTTCCTTGTttatgtctgcagcttgattt
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             8342 321 +     20448 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-atgtaacagacggggaaggcaggta-gtcccaccctaatcttattaatgaaataggctttccacttgaccttcaccatcttgtctgctccctactgtaca-gtggctcgcaaaa--aga--aaatggagccaccaccttgaacatgcctagtccaagtagtacattactat-gggcac--------aattgctggcagttacccatgcaagctttcagcttccttgtttatgtctgcagcttgattt
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20565150 321 +  20919399 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-atgtaacagacggggaaggcaggta-gtcccaccctaatcttattactgaaataggctttccacttgaccttcaccatcttgtctgctccttactgtaca-gtggctcgcaaaa--aga--aaatggagccaccaccttgaacatgcctagtccaagtagtacattactat-gggcac--------aattgctggcagttacccatgcaagctttcagcttccttgtttatgtctgcagcttgattt
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   7082 321 +     41871 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-atgaaacagacggggaaggcaggta-gtcccaccctaatcttattactgaaataggctttccacttgaccttcaccatcttgtctgctccttactgtaca-gtggctcgcaaaa--aga--aaatggagccaccaccttgaacatgcctagtccaagtagtacattactat-gggcac--------aattgctggcagttacccatgcaagctttcagcttccttgtttatgtctgcagcttgattt
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    10375 321 +     27711 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-atgtaacagacggggaaggcaggta-gtcccaccctaatcttattactgaaataggctttccacttgaccttcaccatcttgtctgctccttactgtaca-gtggctcgcaaaa--aga--aaatggagccaccaccttgaacatgcctagtccaagtagtacattactat-gggcac--------aattgctggcagttacccatgcaagctttcagcttccttgtttatgtctgcagcttgattt
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  1374 321 -     11374 agaccaca-------g--------------------------caga-tttt-ataggcgggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-atgtaacagacggggaaggcaggta-gtcccaccctaatcttattactgaaataggctttccacttgaccttcaccatcttgtctgctccttactgtaca-gtggctcgcaaaa--aga--aaatggagccaccaccttgaacatgcctagtccaagtagtacattactat-gggcac--------aattgctggcagttacccatgcaagctttcagcttccttgtttatgtctgcagcttgattt
i Papio_ursinus.k141_5274964                             C 0 C 0
s Pithecia_albicans.k141_1476471                              6968  23 +     26961 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGAAAAA-AAAAAG--------AACCGTTAT----------------------------------------------------
i Pithecia_albicans.k141_1476471                         N 0 T 2964
s Pithecia_chrysocephala.k141_839575                          3096  22 +     23417 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGAAAA--AAAGAG--------AACCGTTAT----------------------------------------------------
i Pithecia_chrysocephala.k141_839575                     N 0 T 2949
s Pithecia_hirsuta.k141_305604                                6960  23 +     29694 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGAAAAA-AAAAAG--------AACCGTTAT----------------------------------------------------
i Pithecia_hirsuta.k141_305604                           N 0 T 2964
s Pithecia_mittermeieri.k141_446740                          31986  23 +     52772 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGAAAAA-AAAAAG--------AACCGTTAT----------------------------------------------------
i Pithecia_mittermeieri.k141_446740                      N 0 T 2964
s Pithecia_pissinattii.k141_1824269                           6982  23 +     26198 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGAAAAA-AAAAAG--------AACCGTTAT----------------------------------------------------
i Pithecia_pissinattii.k141_1824269                      N 0 T 2964
s Pithecia_pithecia.tarseq_165                             3943513  22 +   4542175 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGAAAA--AAAAAG--------AACCGTTAT----------------------------------------------------
i Pithecia_pithecia.tarseq_165                           N 0 T 2947
s Pithecia_vanzolinii.k141_1697688                            6946  23 -     23490 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGAAAAA-AAAAAG--------AACCGTTAT----------------------------------------------------
i Pithecia_vanzolinii.k141_1697688                       N 0 T 2964
s Plecturocebus_bernhardi.k141_2549090                       11208  24 -     39866 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTAAAA-GAAAAAG--------AACCGTTAT----------------------------------------------------
i Plecturocebus_bernhardi.k141_2549090                   N 0 T 2973
s Plecturocebus_brunneus.k141_1495506                        20371  24 +     34906 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTAAAA-GAAAAAG--------AACCGTTAT----------------------------------------------------
i Plecturocebus_brunneus.k141_1495506                    N 0 T 2970
s Plecturocebus_caligatus.k141_1382851                       24633  24 +     87950 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTAAAA-GAAAAAG--------AACCGTTAT----------------------------------------------------
i Plecturocebus_caligatus.k141_1382851                   N 0 T 2968
s Plecturocebus_cinerascens.k141_1164729                     25460  24 +     88961 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTAAAA-GAAAAAG--------AACCGTTAT----------------------------------------------------
i Plecturocebus_cinerascens.k141_1164729                 N 0 T 2968
s Plecturocebus_cupreus.k141_2351393                         11130  24 +     39403 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTAAAA-GAAAAAG--------AACCGTTAT----------------------------------------------------
i Plecturocebus_cupreus.k141_2351393                     N 0 T 2967
s Plecturocebus_dubius.k141_1058799                          24913  24 -     87928 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTAAAA-GAAAAAG--------AACCGTTAT----------------------------------------------------
i Plecturocebus_dubius.k141_1058799                      N 0 T 2963
s Plecturocebus_grovesi.k141_2013005                         31875  24 +     60166 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTAAAA-GAAAAAG--------AACCGTTAT----------------------------------------------------
i Plecturocebus_grovesi.k141_2013005                     N 0 T 2972
s Plecturocebus_hoffmannsi.k141_3303950                      32071  24 +     67232 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTAAAA-GAAAAAG--------AACCGTTAT----------------------------------------------------
i Plecturocebus_hoffmannsi.k141_3303950                  N 0 T 2971
s Plecturocebus_miltoni.k141_349282                          27544  24 +     90634 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTAAAA-GAAAAAG--------AACCGTTAT----------------------------------------------------
i Plecturocebus_miltoni.k141_349282                      N 0 T 2971
s Plecturocebus_moloch.k141_1031110                          24917  24 -     89403 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTAAAA-GAAAAAG--------AACCGTTAT----------------------------------------------------
i Plecturocebus_moloch.k141_1031110                      N 0 T 2972
s Pongo_abelii.CM009266.2                                189157205 326 + 189387572 AGACCACA-------G--------------------------CAGA-Tttttataggcaggcttga-gg-aggTGATGTC-TGCTTTCCCACGGGGTTCATGGATTGGCTTGACCAGGTGGGACGTTTTACATAGCAGGCGGGGAAGGCTGGTAAgtcccaccctaatcttattatgcaaatggactTTCCACTTGACCGTCACCATCCTGTCTGCTCCTTACAATACA-GTGGCtggcaaaaagaga--aaatggagccACCACTTTGAACATGCCTAGCCCAGGTAGTACATTACTAT-GG-CAC--------AATTGCTGGCATTCACCCATGCAGGCTTTCAGCTTGCTTGTttatgtctgcagcttgattt
i Pongo_abelii.CM009266.2                                I 24760 T 23652
s Pongo_pygmaeus.ctg66                                     9572201 323 +   9816681 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtgatgtc-tgctttcc-acggggttcatggattggcttgaccaggtgggacgttt-acatagcaggcggggaaggctggta-gtcccaccctaatcttattatgcaaatggactttccacttgaccgtcaccatcctgtctgctccttacaataca-gtggctggcaaaaagaga--aaatggagccaccactttgaacatgcctagcccaggtagtacattactat-gggcac--------aattgctggcattcacccatgcaggctttcagcttgcttgtttatgtctgcagcttgattt
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               74780 323 -     81375 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acataacaggcggggaaggcaggta-gtcccaccctaatcttgttattgaaataggctttccacttgaccttcaccaccttgtctgctccttactgtaca-gtggctcacaaaaaga--gaaaatggagccaccaccttgaacatgcctagcccaggtagtacattactat-gggcag--------aattgctggcatttacccatgcaagctttcagcttccttgtttatgtctgcagcttgattt
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              6597 323 +     19060 agaccaca-------g--------------------------caga-tttt-atagccaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acataacaggcggggaaggcaggta-gtcccaccctaatcttgttattgaaataggctttccacttgaccttcaccaccttgtctgctccttactgtaca-gtggctcacaaaaaga--gaaaatggagccaccaccttgaacatgcctagcccaggtagtacattactat-gggcag--------aattgctggcatttacccatgcaagctttcagcttccttgtttatgtctgcagcttgattt
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Pygathrix_cinerea.k141_1153803                             16581 323 -     91421 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acataacaggcggggaaggcaggta-gtcccaccctaatcttgttattgaaataggctttccacttgaccttcaccaccttgtctgctccttactgtaca-gtggctcgcaaaaaga--gaaaatggagccaccaccttgaacatgcctagcccaggtagtacattactat-gggcac--------aattgctggcatttacccatgcaagctttcagcttccttgtttatgtctgcagcttgattt
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7610701 349 +   7812017 agaccaca-------gcagattttataggcgtcagaccacagcaga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acataacaggcggggaaggcaggta-gtcccaccctaatcttgttattgaaataggctttccacttgaccttcaccaccttgtctgctccttactgtaca-gtggctcgcaaaaaga--gaaaatggagccaccaccttgaacatgcctagcccaggtagtacattactat-gggcac--------aattgctggcatttacccatgcaagctttcagcttccttgtttatgtctgcagcttgattt
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             16580 349 -     72585 agaccaca-------gcagattttataggcgtcagaccacagcaga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acataacaggcggggaaggcaggta-gtcccaccctaatcttgttattgaaataggctttccacttgaccttcaccaccttgtctgctccttactgtaca-gtggctcgcaaaaaga--gaaaatggagccaccaccttgaacatgcctagcccaggtagtacattactat-gggcac--------aattgctggcatttacccatgcaagctttcagcttccttgtttatgtctgcagcttgattt
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             8297 323 -     11128 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acataacaggcggggaaggcaggta-gtcccaccctaatcttgttattgaaataggctttccacttgaccttcaccaccttgtctgctccttactgtaca-gtggctcgcaaaaaga--gaaaatggagccaccaccttgaacatgcctagcccaggtagtacattactat-gggcac--------aattgctggcatttacccatgcaagctttcagcttccttgtttatgtctgcagcttgattt
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91237646 323 - 195417433 AGACCACA-------G--------------------------Caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acataacaggcggggaaggcaggta-gtcccaccctaatcttgttattgaaataggctttccacttgaccTTCACCaccttgtctgctccttactgtaca-gtGGCTcgcaaaaaga--gaaaatggagccACCACCTTGAACATGCCTAGCccaggtagtacattactat-gggcac--------aattgctggcatttacccatgcaagctttcagcttccttGTTtatgtctgcagcttgattt
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7673308 323 +   7961872 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acataacaggcggggaaggcaggta-gtcccaccctaatcttgttattgaaataggctttccacttgaccttcaccaccttgtctgctccttactgtaca-gtggctcgcaaaaaga--gaaaatggagccaccaccttgaacatgcctagcccaggtagtacattactat-gggcac--------aattgctggcatttacccatgcaagctttcagcttccttgtttatgtctgcagcttgattt
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_imperator.k141_1496743                             1321   2 +      2253 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CG-----------------------------------------------------
i Saguinus_imperator.k141_1496743                        I 24 I 57
s Saguinus_inustus.k141_3945547                               1769   2 -      8737 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CG-----------------------------------------------------
i Saguinus_inustus.k141_3945547                          I 2 I 57
s Saguinus_labiatus.k141_4004060                              1401   2 +      2343 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CG-----------------------------------------------------
i Saguinus_labiatus.k141_4004060                         I 14 I 57
s Saguinus_mystax.k141_4699220                                 729   2 -      7576 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CG-----------------------------------------------------
i Saguinus_mystax.k141_4699220                           I 14 I 56
s Saimiri_boliviensis.NW_024100920.1                     119952363   2 - 121099817 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CG-----------------------------------------------------
i Saimiri_boliviensis.NW_024100920.1                     I 15 I 57
s Saimiri_cassiquiarensis.k141_2188234                       24705   2 +     46362 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CG-----------------------------------------------------
i Saimiri_cassiquiarensis.k141_2188234                   I 15 I 57
s Saimiri_macrodon.k141_716185                               24800   2 +     45824 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG-----------------------------------------------------
i Saimiri_macrodon.k141_716185                           I 15 I 57
s Saimiri_oerstedii.k141_1487881                             41479   2 -     64574 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CG-----------------------------------------------------
i Saimiri_oerstedii.k141_1487881                         I 15 I 57
s Saimiri_sciureus.k141_2278166                               4552   2 -     23631 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CG-----------------------------------------------------
i Saimiri_sciureus.k141_2278166                          I 15 I 57
s Saimiri_ustus.k141_1484609                                 24696   2 -     61129 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CG-----------------------------------------------------
i Saimiri_ustus.k141_1484609                             I 15 I 57
s Sapajus_apella.ctg103                                    5422037   2 -   5703754 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG-----------------------------------------------------
i Sapajus_apella.ctg103                                  I 15 I 56
s Sapajus_macrocephalus.k141_351809                          57278   2 -     80660 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CG-----------------------------------------------------
i Sapajus_macrocephalus.k141_351809                      I 15 I 56
s Semnopithecus_entellus.k141_1672505                         1476 323 -     12572 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acataacaggcggggaaggcaggta-gtcccaccctaatcttgttattgaaataggctttccacttgaccttcaccaccttgtctgctccttactgtata-gtggctcgcaaaaaga--gaaaatggagccaccaccttgaacatgcctagcccaggtagtacattactat-gggcac--------aattgctggcatttacccatgcaagctttcagcttccttgtttatgtctgcagcttggttt
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      28328 323 +     39453 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acataacaggcggggaaggcaggta-gtcccaccctaatcttgttattgaaataggctttccacttgaccttcaccaccttgtctgctccttactgtaca-gtggctcgcaaaaaga--gaaaatggagccaccaccttgaacatgcctagcccaggtagtacattactat-gggcac--------aattgctggcatttacccatgcaagctttcagcttccttgtttatgtctgcagcttggttt
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            8836 323 +     27826 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acataacaggcggggaaggcaggta-gtcccaccctaatcttgttattgaaataggctttccacttgaccttcaccaccttgtctgctccttactgtaca-gtggctcgcaaaaaga--gaaaatggagccaccaccttgaacatgcctagcccaggtagtacattactat-gggcac--------aattgctggcatttacccatgcaagctttcagcttccttgtttatgtctgcagcttgcttt
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             8370 323 -     19483 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acataacaggcggggaaggcaggta-gtcccaccctaatcttgttattgaaataggctttccacttgaccttcaccaccttgtctgctccttactgtaca-gtggctcgcaaaaaga--gaaaatggagccaccaccttgaacatgcctagcccaggtagtacattactat-gggcac--------aattgctggcatttacccatgcaagctttcagcttccttgtttatgtctgcagcttggttt
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      1675 323 -     12762 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acataacaggcggggaaggcaggta-gtcccaccctaatcttgttattgaaataggctttccacttgaccttcaccaccttgtctgctccttactgtata-gtggctcgcaaaaaga--gaaaatggagccaccaccttgaacatgcctagcccaggtagtacattactat-gggcac--------aattgctggcatttacccatgcaagctttcagcttccttgtttatgtctgcagcttggttt
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           1522 324 +     13763 agaccaca-------g--------------------------caga-tttttataggcaggcttaa-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acataacaggcagggaaggcaggta-gtcccaccctaatcttgttattgaaataggctttccacttgaccttcaccaccttgtctgctccttactgtaca-gtggctcgcaaaaaga--gaaaatggagccaccaccttgaacatgcctagcccaggtagtacattactat-gggcac--------aattgctggcatttacccatgcaagctttcagcttccttgtttatgtctgcagcttggttt
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Theropithecus_gelada.CM009954.1                        186429998 321 + 186847797 AGACCACA-------G--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctTTCC-ATAGGGCACATGGATTGGCTTGACTAGGTGTGACATTT-ATGTAACAGGCGGGGAAGGCAGGTA-gtcccaccctaatcttattactGAAATAGGCTTTCCACTTGACCTtcaccatcttgtctgctccttactgtaca-gtGGCTCGCAAAA--AGA--AAATGGAGCCACCACCTTGAACATGCCTAGTCCAAGTAGTACATTACTAT-GGGCAC--------AATTGCTGGCAGTTACCCATGCAAGCTTTCAGCTTCCTTGTTtatgtctgcagcttgattt
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                         12421 324 -     20410 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtcttgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acataacaggcggggaaggcaggta-gtcccaccctaatcttgttattgaaataggctttccacttgaccttcaccaccttgtctgctccttactgtaca-gtggctcgcaaaaaga--gaaaatggagccaccaccttgaacatgcctagcccaggtagtacattactat-gggcac--------aattgctggcatttacccatgcaagctttcagcttccttgtttatgtctgcagcttggttt
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      1537 323 -     12674 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acataacaggtggggaaggcaggta-gtcccaccctaatcttgttattgaaataggctttccacttgaccttcaccaccttgtctgctccttactgtaca-gtggctcgcaaaaaga--gaaaatggagccaccaccttgaacatgcctagcccaggtagtacattactat-gggcac--------aattgctggcatttacccatgcaagctttcagcttccttgtttatgtctgcagcttggttt
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       12528 324 +     19930 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtcttgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acataacaggcggggaaggcaggta-gtcccaccctaatcttgttattgaaataggctttccacttgaccttcaccaccttgtctgctccttactgtaca-gtggctcgcaaaaaga--gaaaatggagccaccaccttgaacatgcctagcccaggtagtacattactat-gggcac--------aattgctggcatttacccatgcaagctttcagcttccttgtttatgtctgcagcttggttt
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       8925 323 -     19997 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acataacaggcggggaaggcaggta-gtcccaccctaatcttgttattgaaataggctttccacttgaccttcaccaccttgtctgctccttactgtaca-gtggctcgcaaaaaga--gaaaatggagccaccaccttgaacatgcctagcccaggtagtacattactat-gggcac--------aattgctggcatttacccatgcaagctttcagcttccttgtttatgtctacagcttggttt
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            49070 323 -     60166 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acataacaggcggggaaggcaggta-gtcccaccctaatcttgttattgaaataggctttccacttgaccttcaccaccttgtctgctccttactgtgca-gtggctcgcaaaaaga--gaaaatggagccaccaccttgaacatgcctagcccaggtagtacattactat-gggcac--------aattgctggcatttacccatgcaagctttcagcttccttgtttatgtctgcagcttggttt
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        16532 323 -     27529 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acataacaggcggggaaggcaggta-gtcccaccctaatcttgttattgaaataggctttccacttgaccttcaccacctcgtctgctccttactgtaca-gtggctcgcaaaaaga--gaaaatggagccaccaccttgaacatgcctagcccaggtagtacattactat-gggcac--------aattgctggcatttacccatgcaagctttcagcttccttgtttatgtctgcagcttggttt
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     16482 323 -     18194 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acataacaggcggggaagacaggta-gtcccaccctaatcttgttattgaaataggctttccacttgaccttcaccaccttgtctgctccttactgtaca-gtggctcgcaaaaaga--gaaaatggagccaccaccttgaacatgcctagcccaggtagtacattactat-aggcac--------aattgctggcatttacccatgcaagctttcagcttccttgtttatgtctacagcttggttt
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                          10194 323 -     21137 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acataacaggcggggaaggcaggta-gtcccaccctaatcttgttattgaaataggctttccacttgaccttcaccaccttctctgctccttactgtaca-gtggctcgcaaaaaga--gaaaatggagccaccaccttgaacatgcctagcccaggtagtacattactat-gggcac--------aattgctggcatttacccatgcaagctttcagcttccttgtttatgtctgcagcttggttt
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    8895 323 -     10723 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acataacaggcggggaaggcaggta-gtcccaccctaatcttgttattgaaataggctttccacttgaccttcaccaccttgtctgctccttactgtaca-gtggctcgcaaaaaga--gaaaatggagccaccaccttgaacatgcctagcccaggtagtacattactat-aggcac--------aattgctggcatttacccatgcaagctttcagcttccttgtttatgtctacagcttggttt
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         8071 323 +      9834 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acataacaggtggggaaggcaggta-gtcccaccctaatcttgttattgaaataggctttccacttgaccttcaccaccttgtctgctccttactgtaca-gtggctcgcaaaaaga--gaaaatggagccaccaccttgaacatgcctagcccaggtagtacattactat-gggcac--------aattgctggcatttacccatgcaagctttcagcttccttgtttatgtctgcagcttggttt
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        26394 323 +     32220 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acataacaggtggggaaggcaggta-gtcccaccctcatcttgttattgaaataggctttccacttgaccttcaccaccttgtctgctccttactgtaca-gtggctcgcaaaaaga--gaaaatggagccaccaccttgaacatgcctagcccaggtagtacattactat-gggcac--------aattgctggcatttacccatgcaagctttcagcttccttgtttatgtctgcagcttggttt
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5940491 323 +   6242583 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acataacaggtggggaaggcaggta-gtcccaccctaatcttgttattgaaataggctttccacttgaccttcaccaccttgtctgctccttactgtaca-gtggctcgcaaaaaga--gaaaatggagccaccaccttgaacatgcctagcccaggtagtacattactat-gggcac--------aattgctggcatttacccatgcaagctttcagcttccttgtttatgtctgcagcttggttt
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                        9743 323 +     20839 agaccaca-------g--------------------------caga-tttt-ataggcaggcttga-gg-aggtggtgtc-tgctttcc-atagggcacatggattggcttgactaggtgtgacattt-acataacaggcggggaaggcaggta-gtcccaccctaatcttgttattgaaataggctttccacttgaccttcaccaccttgtctgctccttactgtaca-gtggctcgcaaaaaga--gaaaatggagccaccaccttgaacatgcctagcccaggtagtacattactat-gggcac--------aattgctggcatttacccatgcaagctttcagcttccttgtttatgtctgcagcttggttt
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881  13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441   0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202   0 +      8798 C
e Galago_senegalensis.k141_631886                             7400   0 +     11339 C
e Galago_moholi.ctg2040                                     429710   0 -    453645 C
e Saguinus_midas.LG03                                    209476296  66 + 209938924 I
e Saguinus_bicolor.k141_8081                                  2639  66 +     42994 I
e Cebuella_niveiventris.k141_280505                          14658   0 +     15466 C
e Mus_pahari.LT608297.1                                   31356171  20 -  89631738 I
e Mus_spretus.CM004101.1                                  90753558  20 - 130317789 I
e Mus_musculus.chr8                                       87651497  20 - 129401213 I
e Mus_caroli.LT608237.1                                   84362512  20 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476  16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445   0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734   0 -     33856 C
e Perodicticus_potto.k141_1186926                              597   0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219   0 -      3244 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      16031  16 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Xerus_inauris.XerIna_scaffold_2302                          2289  11 +    224448 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 12422 320 -     43706 T
e Vicugna_pacos.KN270157.1                                 5372964  16 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851580  13 -   5085361 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   54478  14 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15739083  18 +  33153633 I
e Tupaia_tana.TupTan_flattened_line_97126                    10418  13 -     10553 I
e Tupaia_chinensis.KB320699.1                              2156971  13 +   4065304 I
e Trichechus_manatus.JH594705.1                            4294941  30 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_40725                     797  18 +     27266 I
e Tonatia_saurophila.TonSau_scaffold_294                     82385  30 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   7580  14 +      8208 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              106564  10 +    114563 I
e Tarsius_wallacei.k141_254427                                1877   3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080   3 +     70052 I
e Tapirus_terrestris.TapTer_scaffold_755                    388291  19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821  19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73860  14 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                12005  18 +     41958 I
e Symphalangus_syndactylus.tarseq_199                      1093192   0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6812310   9 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629              19505  15 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             32197  13 +     97271 I
e Spermophilus_dauricus.KZ294078.1                         1955257  36 -   3870691 I
e Sorex_araneus.JH798187.1                                13652179  20 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4928   8 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_42075                     1435  20 -     30804 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    154382  15 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                89023  18 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        368189  17 -   3329780 I
e Rattus_norvegicus.chr16                                 53571726  38 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  6452  13 +     55207 I
e Puma_concolor.QAVW01001104.1                            20275474  22 -  38429054 I
e Pteropus_vampyrus.KN534172.1                                8028  12 -      8028 I
e Pteropus_alecto.KB030862.1                              22977975  18 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         41723  13 +     42204 I
e Pteronotus_parnellii.KE909381.1                            16321  33 -     21811 I
e Psammomys_obesus.NESX01036370.1                            11540  20 -     21651 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790  14 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35577  18 +     35617 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             2956  18 +     22620 I
e Piliocolobus_tephrosceles.PDMG02000141.1                14297396 615 -  14605196 I
e Piliocolobus_kirkii.k141_448987                            41153 615 +     51399 I
e Piliocolobus_gordonorum.k141_381342                        39739 615 +     89929 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9883  18 +     63832 I
e Petromus_typicus.PetTyp_scaffold_42190                     29272  10 -     29689 I
e Peromyscus_maniculatus.KI615324.1                       18195914  20 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690  60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13820  11 -     78924 I
e Pantholops_hodgsonii.KE114653.1                          1265873  11 -   2937107 I
e Panthera_tigris.KE722367.1                               4722402  24 -   8748460 I
e Panthera_pardus.KV860321.1                                265522  24 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  152313  24 +    230217 I
e Ovis_canadensis.OviCan_scaffold_2572                      174955  25 -    191736 I
e Ovis_aries.CM001607.2                                   17586978  17 +  44047080 I
e Otocyon_megalotis.JAEUCK010005147.1                       463984 325 -    559221 T
e Oryctolagus_cuniculus.CM000791.1                        67148837  19 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271  14 -     18566 I
e Orcinus_orca.KB316932.1                                  2782838  18 -  10937097 I
e Onychomys_torridus.OnyTor_scaffold_2986                    81338  20 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   26299  20 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77710  15 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         145831   4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              507863  13 -   2017862 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Ochotona_princeps.JH802162.1                             1365383  19 +   3988456 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869   0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414   0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947   0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9150892 182 -   9404916 T
e Noctilio_leporinus.NocLep_scaffold_251                    759056  18 +    783361 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866929  18 +   7148211 I
e Neomonachus_schauinslandi.NINY01007730.1                20308720  13 +  31847680 I
e Nannospalax_galili.KL204047.1                            2035666   6 -   3037898 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190475  14 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_281845                        1174  18 +      1835 I
e Myotis_lucifugus.GL429869.1                              3905022  18 -   4330536 I
e Myotis_davidii.KB100139.1                                1588925  18 -   6019432 I
e Myotis_brandtii.KE162005.1                                281670  16 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     72319  10 -     80779 I
e Mustela_putorius.JH418006.1                               302916  13 -  14710649 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           8028  18 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398   7 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1878   9 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 142833  33 -    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27960  18 -    437263 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7127  13 -      8324 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             35221   4 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1851541   4 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11261648  20 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                17041  33 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593  14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    4451  18 +     10310 I
e Mesocricetus_auratus.KB708134.1                         12183350  20 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 33894  20 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365             11521  13 +     13704 I
e Megaderma_lyra.MegLyr_scaffold_4542                        14530  18 -    207569 I
e Marmota_marmota.CZRN01000018.1                          33104398  36 -  40650429 I
e Manis_pentadactyla.KN006162.1                              51430  45 -    317179 I
e Manis_javanica.JSZB01003497.1                              19444  13 +    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_8222                 91834  18 +     94391 I
e Lycaon_pictus.CM007581.1                                17956957 950 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653  30 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268845  18 -    662738 I
e Lepus_americanus.LepAme_scaffold_107385                     7936  19 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044260  13 +   3914936 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Lasiurus_borealis.LasBor_scaffold_50988                    16348  23 +     29960 I
e Kogia_breviceps.KogBre_flattened_line_192630                3156  18 -      3359 I
e Jaculus_jaculus.JH725527.1                               8278294  16 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_48101               23781  18 +     23964 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7522111  36 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      84244  10 +    135385 I
e Hylobates_pileatus_a.tarseq_633                            3336052   0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157   0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374   0 +     14092 C
e Hylobates_agilis.k141_232023                                2330   0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  46186  26 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_101188                274  17 +      9903 I
e Hipposideros_armiger.JXIK01000431.1                       111703  17 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577   3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337  14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20663359  10 +  22651954 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 19003  19 +     36099 I
e Helogale_parvula.HelPar_flattened_line_2585               243500  20 +    327341 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Graphiurus_murinus.GraMur_scaffold_10447                   33784  11 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            32101  11 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609797  17 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_108840               2625  14 -      9135 I
e Galagoides_demidoff.k141_1711393                            4689   0 +     41679 C
e Fukomys_damarensis.KN121974.1                             851588   3 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                 10705  24 -     36744 I
e Felis_catus_fca126.CM031415.1                           20196951  24 + 205367284 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Eubalaena_japonica.EubJap_flattened_line_31514             26195  18 -     44125 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           12242  18 +    133382 I
e Erinaceus_europaeus.JH835339.1                           3329391  13 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467  19 +    498745 I
e Equus_caballus.CM000403.2                               18532438  19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631  19 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2146933  18 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16330809  13 -  41312741 I
e Ellobius_talpinus.LOJH01081419.1                            1571  20 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          21665  20 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311832  13 +    607251 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    37538  10 +     67921 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115  19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363  19 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8631289  33 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812577  18 +  35494412 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64708  14 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  37007  10 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838258   8 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             29655  20 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_37019               4120  20 -     19598 I
e Cricetulus_griseus.LT883664.1                           11668649  21 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 51209  20 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           1672  18 +     23735 I
e Condylura_cristata.JH655891.1                           17549224  15 -  53390261 I
e Colobus_polykomos.k141_906115                              38403 599 +     84244 I
e Colobus_guereza.LG01                                   199950123 603 + 200372422 I
e Colobus_angolensis.KN981557.1                            1911875 603 +   2368649 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1254065  10 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1687  14 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542  19 -     25243 I
e Cephalopachus_bancanus.k141_1423433                         6085   3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     94740   9 +    217609 I
e Castor_canadensis.CasCan_scaffold_2074                    138470  15 +    179628 I
e Carollia_perspicillata.CarPer_scaffold_92756                6282  30 -     11696 I
e Carlito_syrichta.NW_007259797.1                           156587   3 -    496798 I
e Capromys_pilorides.CapPil_scaffold_65020                    2136  10 -     12242 I
e Capra_hircus.CM004588.1                                 18061518  11 -  44709034 I
e Capra_aegagrus.CM003241.1                               18830798  11 +  46296322 I
e Canis_lupus_orion.HG994398.1                            18502019 950 +  63665305 I
e Canis_lupus_familiaris.chr16                            17960717 950 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9036246 952 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     1546 950 -     43241 I
e CanFam4.chr16                                           17800803 952 -  60362399 I
e Camelus_ferus.KB017975.1                                  404222  16 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2335923  16 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10003447  16 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2820170  21 +   4408762 I
e Bos_taurus.CM000184.6                                   18200538  21 - 114055384 I
e Bos_mutus.JH880303.1                                     1126420  17 -   1948126 I
e Bos_indicus.CM003028.1                                  18363564  21 - 116941312 I
e Bison_bison.KN261452.1                                    200679  13 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    27602  14 +     34529 I
e Balaenoptera_bonaerensis.DF707048.1                         3395  18 -     18090 I
e Balaenoptera_acutorostrata.KI537508.1                   15192930  18 +  23207421 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  5924  48 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         538   0 +      5281 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      13823  11 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             99169  11 -    100397 I
e Anoura_caudifer.AnoCau_scaffold_1412                      186541  33 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676680  15 -   2318259 I
e Allactaga_bullata.AllBul_scaffold_9566                     75595  13 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             80852  13 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9511778  13 -  29979442 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     71931  20 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           828466  23 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       8545 95 +     62944 tacaggctgctctttgttagaaaaataatga-t---ttggggg-ccacttttgattaaaaggaaaactttactgaggacttctgtac-cctcactaactga
s Allenopithecus_nigroviridis.k141_3361533                   16460 90 -     52922 tacaggctgctgtttgttagaaaaataatga-t---ttggggg-ctgcttttcattaaaaggaaaactttaccaaggacttctgtag-cc-ctgta----t
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         16374 90 -     28001 tacaggctgctgtttgttagaaaaatagtga-t---ttggggg-ctgcttttcattaaaaggaaaactttaccgaggacttctgtag-cc-ctgta----t
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          6874 90 -     18505 tacaggctgctgtttgttagaaaaataatga-t---ttggggg-ctgcttttcattaaaaggaaaacttcaccgaggacttctgtag-cc-ctgta----t
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           7724 90 -     12518 tacaggctgctgtttgttagaaaaataatga-t---ttggggg-ctgcttttcattaaaaggaaaactttaccgaggacttctgtag-cc-ctgta----t
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4477396 90 +   4669795 tacaggctgctgtttgttagaaaaataatga-t---ttgggg-gctgcttttcattaaaaggaaaactttaccGAGGACTTCTGTA-GCC-CTGTA----T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        1891 90 +     17872 tacaggctgctgtttgttagaaaaataatga-t---ttggggg-ctgcttttcattaaaaggaaaactttactgaggacttctgta-gcc-ctgta----t
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           2487 89 -     14043 tacaggctgctgtttgttagaaaaataatga-t---ttgggg--ctgcttttcattaaaaggaaaactttaccgaggacttctgta-gcc-ctgta----t
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          10581 90 +     27781 tacaggctgctgtttgttagaaaaataatga-t---ttggggg-ctgcttttcattaaaaggaaaactttaccgaggacttctgta-gcc-ctgta----t
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        10741 90 -     20310 tacaggctgctgtttgttagaaaaataatga-t---ttgggtg-ctgcttttcattaaaaggaaaactttaccgaggacttctgtag-cc-gtgta----t
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          13721 90 +     29689 tacaggctgctgtttgttagaaaaataatga-t---ttggggg-ctgcttttcattaaaaggaaaactttactgaggacttctgtag-cc-gtgta----t
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            8471 90 -     20078 tacaggctgctgtttgttagaaaaataatga-t---ttggggg-ctgcttttcattaaaaggaaaactttaccgaggatttctgtag-cc-ctgta----t
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          16393 90 -     27936 tacaggctgctgtttgttagaaaaataatga-t---ttggggg-ctgcttttcattaaaaggaaaactttaccgaggacttctgtag-ct-gtgta----t
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            5255 90 -     17152 tacaggctgctgtctgttagaaaaataatga-t---ttggggg-ctgcttttcattaaaaggaaaactttaccgaggacttctgtag-cc-ctgta----t
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38818800 90 +  39242232 tacaggctgctgtttgttagaaaaataatga-t---ttggggg-ctgcttttcattaaaaggaaaactttaccgaggacttctgtag-cc-gtgta----t
i Cercopithecus_albogularis.ctg5                               C 0 I 6184
s Cercopithecus_mona.ctg39                                21224489 90 -  21565898 tacaggctgctgtctgttagaaaaataatga-t---ttggggg-ctgcttttcattaaaaggaaaactttaccgaggacttctgtag-cc-ctgta----t
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       41612 90 -     53127 tacaggctgctgtctgttagaaaaataatga-t---ttggggg-ctgcttttcattaaaaggaaaactttaccgaggacttctgtag-cc-ctgta----t
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        1857 90 +     13442 tacaggctgctgtttgttagaaaaataatga-t---ttggggg-ctgcttttcattaaaaggaaaactttaccgaggacttctgtag-cc-atgta----t
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       16404 90 -     27947 tacaggctgctgtctgttagaaaaataatga-t---ttggggg-ctgcttttcattaaaaggaaaactttaccgaggacttctgtag-cc-ctgta----t
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         16384 90 +     17596 tacaggctgctgtttgttagaaaaataatga-t---ttggggg-ctgcttttcattaaaaggaaaactttaccgagggcttctgtag-cc-ctgta----t
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          2440 90 +     14005 tacaggctgctgtttgttagaaaaataatga-t---ttggggg-ctgcttttcattaaaaggaaaactttaccgaggatttctgtag-cc-ctgta----t
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chlorocebus_aethiops.ctg25                              18430380 90 -  18827391 tacaggctgctgtttgttagaaaaataatga-t---taggggg-ctgcttttcattaaaaggaaaactttaccgaggacttctgtag-cc-ctgta----t
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       16814 90 -     50209 tacaggctgctgtttgttagaaaaataatga-t---taggggg-ctgcttttcattaaaaggaaaactttaccgaggacttctgtag-cc-ctgta----t
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135423815 90 + 135778131 tacaggctgctgtttgttagaaaaataatga-t---taggggg-ctgcttttcattaaaaggaaaactttaccGAGGACTTCTGTAG-CC-CTGTA----T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21206980 90 -  21539334 tacaggctgctgtttgttagaaaaataatga-t---taggggg-ctgcttttcattaaaaggaaaactttaccgaggacttctgtag-cc-ctgta----t
i Erythrocebus_patas.Contig38                            C 0 C 0
s Gorilla_beringei.k141_3596273                              17786 95 -     32273 tacaggctgctctttgttagaaaaataatga-t---ttggggg-ccacttttgattaaaaggaaaactttactgaggacttctgtac-cctcactaactga
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186339923 95 + 186649187 tacaggctgctctttgttagaaaaataatga-t---ttggggg-ccacttttgattaaaaggaaaactttactgaggacttctgtac-cctcactaactga
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hoolock_leuconedys.ctg274                                    436594 91 +    630532 tacagggtgctcttcgttagaaaaataatga-t---tttgggg-ctgcttgtgattaaaaggaaaactttaccaaggacttctgtac-cctcacta----a
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Lophocebus_aterrimus.ctg367                              1438940 88 +   1826925 tacaggctgctgtttgttagaaaaataatga-t---tt-gggg-ctgcttttcattaaaaggaaaactttaccgaggacttctgta--tc-ctgta----t
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                               8760 89 +     40492 tacaggctgctctttgttagaaaaataatga-t---ttggggg-ctgcttttcattaaaaggaaaactttaccgaggacttctgta--cc-ctgta----t
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59678014 89 +  60120075 tacaggctgctctttgttagaaaaataatga-t---ttggggg-ctgcttttcattaaaaggaaaactttaccgaggacttctgta--cc-ctgta----t
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 14532 89 -     26193 tacaggctgctctttgttagaaaaataatga-t---ttggggg-ctgcttttcattaaaaggaaaactttaccgaggacttctgta--cc-ctgta----t
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            82308 89 -    114318 tacaggctgctctttgttagaaaaataatga-t---ttggggg-ctgcttttcattaaaaggaaaactttaccgaggacttctgta--cc-ctgta----t
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  7999 89 -     23192 tacaggctgctctttgttagaaaaataatga-t---ttggggg-ctgcttttcattaaaaggaaaactttaccgaggacttctgta--cc-ctgta----t
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                17463 89 -     29190 tacaggctgctctttgttagaaaaataatga-t---ttggggg-ctgcttttcattaaaaggaaaactttaccgaggacttctgta--cc-ctgta----t
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  26041 89 +     37952 tacaggctgctctttgttagaaaaataatga-t---ttggggg-ctgcttttcattaaaaggaaaactttaccgaggacttctgta--cc-ctgta----t
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186841120 89 + 187317192 tacaggctgctctttgttagaaaaataatga-t---ttggggg-ctgcttttcattaaaaggaaaactttaccGAGGACTTCTGTA--CC-CTGTA----T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25459696 89 -  25927173 tacaggctgctctttgttagaaaaataatga-t---ttggggg-ctgcttttcattaaaaggaaaactttaccGAGGACTTCTGTA--CC-CTGTA----T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  81897 89 +     89720 tacaggctgctctttgttagaaaaataatga-t---ttggggg-ctgcttttcattaaaaggaaaactttaccgaggacttctgta--cc-ctgta----t
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 8890 89 +     20474 tacaggctgctctttgttagaaaaataatga-t---ttggggg-ctgcttttcattaaaaggaaaactttaccgaggacttctgta--cc-ctgta----t
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   8687 89 -     14993 tacaggctgctctttgttagaaaaataatga-t---ttggggg-ctgcttttcattaaaaggaaaactttaccgaggacttctgta--cc-ctgta----t
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  331549 89 -    668171 tacaggctgctctttgttagaaaaataatga-t---ttggggg-ctgcttttcattaaaaggaaaactttaccgaggacttctgta--cc-ctgta----t
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 6999 89 -     24072 tacaggctgctctttgttagaaaaataatga-t---ttggggg-ctgcttttcattaaaaggaaaactttaccgaggacttctgta--cc-ctgta----t
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               27630 89 -     45290 tacaggctgctctttgttagaaaaataatga-t---ttggggg-ctgcttttcattaaaaggaaaactttaccgaggacttctgta--cc-ctgta----t
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23939209 90 -  24302211 tacaggctgctgtttgttagaaaaataatga-t---ttggggg-ctgcttttcattaaaaggaaaactttaccgaggacttctgta-gcc-ctgta----t
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353327 89 +    752769 tacaggctgctgtttgttagaaaaataatga-t---ttgggg--ctgcttttcattaaaaggaaaactttaccgaggacttctgta-gcc-ctgta----t
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Miopithecus_ogouensis.k141_534055                          10891 90 -     28506 tataggctgctgtttgttagaaaaataatga-t---ttggggg-ctgcttttcattaaaaggaaaactttactgaggacttctgtag-cc-ctgta----t
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Nasalis_larvatus.k141_413338                               16918 90 +     21681 tacaggctgctctttgttagaaaaataatga-t---ttggggg-ctgcttttcattgaaaggaaaactttaccgaggacttctgtag-cc-ctgta----t
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Pan_paniscus.KQ411613.1                                    45890 95 +     80009 tacaggctgctctttgttagaaaaataatga-t---ttgGGGG-CCACTTTtgattaaaaggaaaactttacTGAGGACTTCTGTAC-CCTCACTAACTAA
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189144773 95 + 189151597 tacaggctgctctttgttagaaaaataatga-t---ttgGGGG-CCACTTTtgattaaaaggaaaactttacTGAGGACTTCTGTAC-CCTCACTAACTGA
i Pan_troglodytes.CM009242.2                             I 467 I 864
s Papio_anubis.CM001495.2                                183445013 88 + 183742232 tacaggctgctgtttgttagaaaaataatga-t---tt-gggg-ctgcttttcatttaaAGGAAAACTTTACCGAGGACTTCTGTA--CC-CTGTA----T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             8663 88 +     20448 tacaggctgctgtttgttagaaaaataatga-t---tt-gggg-ctgcttttcattaaaaggaaaactttaccgaggacttctgta--cc-ctgta----t
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20565471 88 +  20919399 tacaggctgctgtttgttagaaaaataatga-t---tt-gggg-ctgcttttcattaaaaggaaaactttaccgaggacttctgta--cc-ctgta----t
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   7403 88 +     41871 tacaggctgctgtttgttagaaaaataatga-t---tt-gggg-ctgcttttcattaaaaggaaaactttactgaggacttctgta--cc-ctgta----t
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    10696 88 +     27711 tacaggctgctgtttgttagaaaaataatga-t---tt-gggg-ctgcttttcattaaaaggaaaactttaccgaggacttctgta--cc-ctgta----t
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  1695 88 -     11374 tacaggctgctgtttgttagaaaaataatga-t---tt-gggg-ctgcttttcattaaaaggaaaactttaccgaggacttctgta--cc-ctgta----t
i Papio_ursinus.k141_5274964                             C 0 C 0
s Pongo_abelii.NDHI03003595.1                                 3741 91 -     34550 tacaggctgccttttgttagaaaaataatga-t---tttgggg-ccacttttgtttaaaaggaaaactttaccGAGGACTTCTGTAC-CCTCACTA----A
i Pongo_abelii.NDHI03003595.1                            I 323 C 0
s Pongo_pygmaeus.ctg66                                     9572524 91 +   9816681 tacaggctgccttttgttagaaaaataatga-t---tttgggg-ccacttttgtttaaaaggaaaactttaccgaggacttctgtac-cctcacta----a
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               75103 90 -     81375 tacaggctgctctttgttagaaaaataatga-t---ttggggg-ctgcttttcattgaaaggaaaactttaccgaggacttctgtag-cc-ctgta----t
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              6920 90 +     19060 tacaggctgctctttgttagaaaaataatga-t---ttggggg-ctgcttttcattgaaaggaaaactttaccgaggacttctgtag-cc-ctgta----t
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Pygathrix_cinerea.k141_1153803                             16904 90 -     91421 tacaggctgctctttgttagaaaaataatga-t---ttggggg-ctgcttttcattgaaaggaaaactttaccgaggacttctgtag-cc-ctgta----t
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7611050 90 +   7812017 tacaggctgctctttgttagaaaaataatga-t---ttggggg-ctgcttttcattgaaaggaaaactttaccgaggacttctgtag-cc-ctgta----t
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             16929 90 -     72585 tacaggctgctctttgttagaaaaataatga-t---ttggggg-ctgcttttcattgaaaggaaaactttaccgaggacttctgtag-cc-ctgta----t
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             8620 93 -     11128 tacaggctgctctttgttagaaaaataatga-tgatttggggg-ctgcttttcattgaaaggaaaacttgaccgaggacttctgtag-ct-ctgta----t
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91237969 93 - 195417433 tacaggctgctctttgttagaaaaataatga-tgatttggggg-ctgcttttcattgaAAGGAAAACTTTACCGAGGACTTCTGTAG-CT-CTGTA----T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7673631 93 +   7961872 tacaggctgctctttgttagaaaaataatga-tgatttggggg-ctgcttttcattgaaaggaaaactttaccgaggacttctgtag-ct-ctgta----t
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Semnopithecus_entellus.k141_1672505                         1799 90 -     12572 tacaggctgctctttgttagaaaaataatga-t---ttggggg-ctgcttttcattgaaaggaaaactttaccgaggacttctgtag-cc-ctgta----t
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      28651 90 +     39453 tacaggctgctctttgttagaaaaataatga-t---ttggggg-ctgcttttcattgaaaggaaaactttaccgaggacttctgtag-cc-ctgta----t
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            9159 90 +     27826 tacaggctgctctttgttagaaaaataatga-t---ttggggg-ctgcttttcattgaaaggaaaactttaccgaggacttctgtag-cc-ctgta----t
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             8693 90 -     19483 tacaggctgctctttgttagaaaaataatga-t---ttggggg-ctgcttttcattgaaaggaaaactttaccgaggacttctgtag-cc-ctgta----t
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      1998 90 -     12762 tacaggctgctctttgttagaaaaataatga-t---ttggggg-ctgcttttcattgaaaggaaaactttaccgaggacttctgtag-cc-ctgta----t
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           1846 90 +     13763 tacaggcagctctttgttagaaaaataatga-t---ttggggg-ctgcttttcattgaaaggaaaactttaccgaggacttctgtag-cc-ctgta----t
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Theropithecus_gelada.CM009954.1                        186430319 88 + 186847797 tacaggctgctgtttgttagaaaaataatga-t---tt-gggg-ctgcttttcattaaaaggaaaactttaccGAGGACTTCTGTA--CC-CTGTA----T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                         12745 90 -     20410 tacaggctgctctttgttagaaaaataatga-t---ttggggg-ctgcttttcattgaaaggaaaactttaccgaggacttctgtag-cc-ttgta----t
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      1860 90 -     12674 tacaggctgctctttgttagaaaaataatga-t---tcggggg-ctgcttttcattgaaaggaaaactttaccgaggacttctgtag-cc-ctgta----t
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       12852 91 +     19930 tacaggctgctctttgttagaaaaataatga-t---ttggggg-ctgcttttcattgaaaggaaaactttaccgaggacttctgtagccc-ctgta----t
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       9248 90 -     19997 tacaggctgctctttgttagaaaaataatga-t---ttggggg-ctgcttttcattgaaaggaaaactttaccgaggacttctgtag-cc-ctgta----t
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            49393 90 -     60166 tacaggctgctctttgttagaaaaataatga-t---ttggggg-ctgcttttcattgaaaggaaaactttaccgaggacttctgtag-cc-ctgta----t
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        16855 90 -     27529 tacaggctgctctttgttagaaaaataatga-t---ttggggg-ctgcttttcattgaaaggaaaactttaccgaggacttctgtag-cc-ctgta----t
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     16805 90 -     18194 tacaggctgctctttgttagaaaaataatga-t---ttggggg-ctgcttttcattgaaaggaaaactttaccgaggacttctgtag-cc-ctgta----t
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                          10517 90 -     21137 tacaggctgctctttgttagaaaaataatga-t---ttggggg-ccgcttttcattgaaaggaaaactttaccgaggacttctgtag-cc-ctgta----t
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    9218 90 -     10723 tacaggctgctctttgttagaaaaataatga-t---ttggggg-ctgcttttcattgaaaggaaaactttaccgaggacttctgtag-cc-ctgta----t
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         8394 90 +      9834 tacaggctgctctttgttagaaaaataatga-t---tcggggg-ctgcttttcattgaaaggaaaactttaccgaggacttctgtag-cc-ctgta----t
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        26717 90 +     32220 tacaggctgctctttgttagaaaaataatga-t---ttggggg-ctgcttttcattgaaaggaaaactttaccgaggacttctgtag-cc-ctgta----t
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5940814 90 +   6242583 tacaggctgctctttgttagaaaaataatga-t---ttggggg-ctgcttttcattgaaaggaaaactttaccgaggacttctgtag-cc-ctgta----t
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       10066 90 +     20839 tacaggctgctctttgttagaaaaataatga-t---ttggggg-ctgcttttcattgaaaggaaaactttaccgaggacttctgtag-cc-ctgta----t
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
e Plecturocebus_moloch.k141_1031110                          24941 2972 -     89403 T
e Plecturocebus_miltoni.k141_349282                          27568 2971 +     90634 T
e Plecturocebus_hoffmannsi.k141_3303950                      32095 2971 +     67232 T
e Plecturocebus_grovesi.k141_2013005                         31899 2972 +     60166 T
e Plecturocebus_dubius.k141_1058799                          24937 2963 -     87928 T
e Plecturocebus_cupreus.k141_2351393                         11154 2967 +     39403 T
e Plecturocebus_cinerascens.k141_1164729                     25484 2968 +     88961 T
e Plecturocebus_caligatus.k141_1382851                       24657 2968 +     87950 T
e Plecturocebus_brunneus.k141_1495506                        20395 2970 +     34906 T
e Plecturocebus_bernhardi.k141_2549090                       11232 2973 -     39866 T
e Pithecia_vanzolinii.k141_1697688                            6969 2964 -     23490 T
e Pithecia_pithecia.tarseq_165                             3943535 2947 +   4542175 T
e Pithecia_pissinattii.k141_1824269                           7005 2964 +     26198 T
e Pithecia_mittermeieri.k141_446740                          32009 2964 +     52772 T
e Pithecia_hirsuta.k141_305604                                6983 2964 +     29694 T
e Pithecia_chrysocephala.k141_839575                          3118 2949 +     23417 T
e Pithecia_albicans.k141_1476471                              6991 2964 +     26961 T
e Lagothrix_lagothricha.k141_1005387                         15287  0 -     38430 C
e Chiropotes_sagulatus.k141_1421488                          33526 2960 -     50570 T
e Chiropotes_israelita.k141_747660                          101719 2961 +    146308 T
e Cacajao_melanocephalus.k141_619699                         57376 2954 -    119600 T
e Cacajao_hosomi.k141_81245                                  33276 2955 -     95584 T
e Cacajao_calvus.k141_5142                                   64094 2953 +     81800 T
e Cacajao_ayresi.k141_552049                                104591 2955 -    122966 T
e Ateles_paniscus.k141_457735                                21129  0 +     72325 C
e Ateles_marginatus.k141_803263                              13240  0 -     40414 C
e Ateles_geoffroyi_a.k141_833924                                8856  0 -     89868 C
e Ateles_chamek.k141_1806455                                 27084  0 -     30947 C
e Ateles_belzebuth.k141_445860                               44280  0 -     48001 C
e Ateles_geoffroyi_b.tarseq_1536                             21209484  0 -  21539123 C
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2206961                           2447  2 -     15524 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Alouatta_seniculus.k141_117119                             16471  0 +     50774 C
e Alouatta_puruensis.k141_362188                              2019  0 +      5663 C
e Alouatta_palliata.k141_2135620                              5287  0 +     47717 C
e Alouatta_nigerrima.k141_1929159                             1292  0 +     30492 C
e Alouatta_macconnelli.k141_918386                            2334  0 -      9457 C
e Alouatta_juara.k141_1302312                                 1197 57 +     27940 I
e Alouatta_discolor.k141_566626                              12779  0 +     28687 C
e Alouatta_caraya.k141_1701091                                2327  0 -     36483 C
e Alouatta_belzebul.k141_3560514                              9218  0 +     51355 C
e Mus_pahari.LT608297.1                                   31356171 20 -  89631738 I
e Mus_spretus.CM004101.1                                  90753558 20 - 130317789 I
e Mus_musculus.chr8                                       87651497 20 - 129401213 I
e Mus_caroli.LT608237.1                                   84362512 20 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      16031 16 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Xerus_inauris.XerIna_scaffold_2302                          2289 11 +    224448 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 12422 320 -     43706 T
e Vicugna_pacos.KN270157.1                                 5372964 16 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851580 13 -   5085361 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   54478 14 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15739083 18 +  33153633 I
e Tupaia_tana.TupTan_flattened_line_97126                    10418 13 -     10553 I
e Tupaia_chinensis.KB320699.1                              2156971 13 +   4065304 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_40725                     797 18 +     27266 I
e Tonatia_saurophila.TonSau_scaffold_294                     82385 30 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   7580 14 +      8208 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              106564 10 +    114563 I
e Tarsius_wallacei.k141_254427                                1877  3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080  3 +     70052 I
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73860 14 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                12005 18 +     41958 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6812310  9 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629              19505 15 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             32197 13 +     97271 I
e Spermophilus_dauricus.KZ294078.1                         1955257 36 -   3870691 I
e Sorex_araneus.JH798187.1                                13652179 20 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4928  8 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_42075                     1435 20 -     30804 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    154382 15 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                89023 18 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        368189 17 -   3329780 I
e Rattus_norvegicus.chr16                                 53571726 38 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  6452 13 +     55207 I
e Puma_concolor.QAVW01001104.1                            20275474 22 -  38429054 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Pteropus_alecto.KB030862.1                              22977975 18 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         41723 13 +     42204 I
e Pteronotus_parnellii.KE909381.1                            16321 33 -     21811 I
e Psammomys_obesus.NESX01036370.1                            11540 20 -     21651 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35577 18 +     35617 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             2956 18 +     22620 I
e Piliocolobus_tephrosceles.PDMG02000141.1                14297396 615 -  14605196 I
e Piliocolobus_kirkii.k141_448987                            41153 615 +     51399 I
e Piliocolobus_gordonorum.k141_381342                        39739 615 +     89929 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9883 18 +     63832 I
e Petromus_typicus.PetTyp_scaffold_42190                     29272 10 -     29689 I
e Peromyscus_maniculatus.KI615324.1                       18195914 20 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13820 11 -     78924 I
e Pantholops_hodgsonii.KE114653.1                          1265873 11 -   2937107 I
e Panthera_tigris.KE722367.1                               4722402 24 -   8748460 I
e Panthera_pardus.KV860321.1                                265522 24 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  152313 24 +    230217 I
e Ovis_canadensis.OviCan_scaffold_2572                      174955 25 -    191736 I
e Ovis_aries.CM001607.2                                   17586978 17 +  44047080 I
e Otocyon_megalotis.JAEUCK010005147.1                       463984 325 -    559221 T
e Oryctolagus_cuniculus.CM000791.1                        67148837 19 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Orcinus_orca.KB316932.1                                  2782838 18 -  10937097 I
e Onychomys_torridus.OnyTor_scaffold_2986                    81338 20 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   26299 20 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77710 15 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              507863 13 -   2017862 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Ochotona_princeps.JH802162.1                             1365383 19 +   3988456 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9150892 182 -   9404916 T
e Noctilio_leporinus.NocLep_scaffold_251                    759056 18 +    783361 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866929 18 +   7148211 I
e Neomonachus_schauinslandi.NINY01007730.1                20308720 13 +  31847680 I
e Nannospalax_galili.KL204047.1                            2035666  6 -   3037898 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190475 14 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_281845                        1174 18 +      1835 I
e Myotis_lucifugus.GL429869.1                              3905022 18 -   4330536 I
e Myotis_davidii.KB100139.1                                1588925 18 -   6019432 I
e Myotis_brandtii.KE162005.1                                281670 16 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     72319 10 -     80779 I
e Mustela_putorius.JH418006.1                               302916 13 -  14710649 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           8028 18 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1878  9 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 142833 33 -    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27960 18 -    437263 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7127 13 -      8324 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             35221  4 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1851541  4 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11261648 20 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                17041 33 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    4451 18 +     10310 I
e Mesocricetus_auratus.KB708134.1                         12183350 20 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 33894 20 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365             11521 13 +     13704 I
e Megaderma_lyra.MegLyr_scaffold_4542                        14530 18 -    207569 I
e Marmota_marmota.CZRN01000018.1                          33104398 36 -  40650429 I
e Manis_pentadactyla.KN006162.1                              51430 45 -    317179 I
e Manis_javanica.JSZB01003497.1                              19444 13 +    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_8222                 91834 18 +     94391 I
e Lycaon_pictus.CM007581.1                                17956957 950 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268845 18 -    662738 I
e Lepus_americanus.LepAme_scaffold_107385                     7936 19 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044260 13 +   3914936 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Lasiurus_borealis.LasBor_scaffold_50988                    16348 23 +     29960 I
e Kogia_breviceps.KogBre_flattened_line_192630                3156 18 -      3359 I
e Jaculus_jaculus.JH725527.1                               8278294 16 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_48101               23781 18 +     23964 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7522111 36 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      84244 10 +    135385 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  46186 26 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_101188                274 17 +      9903 I
e Hipposideros_armiger.JXIK01000431.1                       111703 17 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20663359 10 +  22651954 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 19003 19 +     36099 I
e Helogale_parvula.HelPar_flattened_line_2585               243500 20 +    327341 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Graphiurus_murinus.GraMur_scaffold_10447                   33784 11 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            32101 11 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609797 17 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_108840               2625 14 -      9135 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Fukomys_damarensis.KN121974.1                             851588  3 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                 10705 24 -     36744 I
e Felis_catus_fca126.CM031415.1                           20196951 24 + 205367284 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Eubalaena_japonica.EubJap_flattened_line_31514             26195 18 -     44125 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           12242 18 +    133382 I
e Erinaceus_europaeus.JH835339.1                           3329391 13 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2146933 18 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16330809 13 -  41312741 I
e Ellobius_talpinus.LOJH01081419.1                            1571 20 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          21665 20 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311832 13 +    607251 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    37538 10 +     67921 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8631289 33 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812577 18 +  35494412 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64708 14 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  37007 10 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838258  8 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             29655 20 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_37019               4120 20 -     19598 I
e Cricetulus_griseus.LT883664.1                           11668649 21 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 51209 20 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           1672 18 +     23735 I
e Condylura_cristata.JH655891.1                           17549224 15 -  53390261 I
e Colobus_polykomos.k141_906115                              38403 599 +     84244 I
e Colobus_guereza.LG01                                   199950123 603 + 200372422 I
e Colobus_angolensis.KN981557.1                            1911875 603 +   2368649 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1254065 10 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1687 14 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Cephalopachus_bancanus.k141_1423433                         6085  3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     94740  9 +    217609 I
e Castor_canadensis.CasCan_scaffold_2074                    138470 15 +    179628 I
e Carollia_perspicillata.CarPer_scaffold_92756                6282 30 -     11696 I
e Carlito_syrichta.NW_007259797.1                           156587  3 -    496798 I
e Capromys_pilorides.CapPil_scaffold_65020                    2136 10 -     12242 I
e Capra_hircus.CM004588.1                                 18061518 11 -  44709034 I
e Capra_aegagrus.CM003241.1                               18830798 11 +  46296322 I
e Canis_lupus_orion.HG994398.1                            18502019 950 +  63665305 I
e Canis_lupus_familiaris.chr16                            17960717 950 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9036246 952 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     1546 950 -     43241 I
e CanFam4.chr16                                           17800803 952 -  60362399 I
e Camelus_ferus.KB017975.1                                  404222 16 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2335923 16 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10003447 16 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2820170 21 +   4408762 I
e Bos_taurus.CM000184.6                                   18200538 21 - 114055384 I
e Bos_mutus.JH880303.1                                     1126420 17 -   1948126 I
e Bos_indicus.CM003028.1                                  18363564 21 - 116941312 I
e Bison_bison.KN261452.1                                    200679 13 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    27602 14 +     34529 I
e Balaenoptera_bonaerensis.DF707048.1                         3395 18 -     18090 I
e Balaenoptera_acutorostrata.KI537508.1                   15192930 18 +  23207421 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  5924 48 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      13823 11 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             99169 11 -    100397 I
e Anoura_caudifer.AnoCau_scaffold_1412                      186541 33 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676680 15 -   2318259 I
e Allactaga_bullata.AllBul_scaffold_9566                     75595 13 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             80852 13 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9511778 13 -  29979442 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     71931 20 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           828466 23 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       8640 873 +     62944  
s Allenopithecus_nigroviridis.k141_3361533                   16550 860 -     52922  
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         16464 874 -     28001  
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          6964 874 -     18505  
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           7814 874 -     12518  
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Cacajao_ayresi.k141_552049                                101636 371 -    122966  
i Cacajao_ayresi.k141_552049                             T 2955 C 0
s Cacajao_calvus.k141_5142                                   61141 371 +     81800  
i Cacajao_calvus.k141_5142                               T 2953 C 0
s Cacajao_hosomi.k141_81245                                  30321 371 -     95584  
i Cacajao_hosomi.k141_81245                              T 2955 C 0
s Cacajao_melanocephalus.k141_619699                         54422 371 -    119600  
i Cacajao_melanocephalus.k141_619699                     T 2954 C 0
s Cercocebus_atys.KQ010504.1                               4477486 881 +   4669795  
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        1981 880 +     17872  
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           2576 880 -     14043  
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          10671 880 +     27781  
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        10831 867 -     20310  
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          13811 867 +     29689  
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            8561 873 -     20078  
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          16483 873 -     27936  
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            5345 873 -     17152  
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38825074 874 +  39242232  
i Cercopithecus_albogularis.ctg5                               I 6184 C 0
s Cercopithecus_mona.ctg39                                21224579 873 -  21565898  
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       41702 873 -     53127  
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        1947 874 +     13442  
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       16494 873 -     27947  
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         16474 873 +     17596  
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          2530 873 +     14005  
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                                242 378 -     17098  
i Cheracebus_lucifer.k141_49986                          N 0 C 0
s Cheracebus_lugens.k141_1393925                               118 378 +     17877  
i Cheracebus_lugens.k141_1393925                         N 0 C 0
s Cheracebus_regulus.k141_471822                            157685 378 -    216457  
i Cheracebus_regulus.k141_471822                         N 0 C 0
s Cheracebus_torquatus.k141_1170026                          62160 378 +     76511  
i Cheracebus_torquatus.k141_1170026                      N 0 C 0
s Chiropotes_albinasus.k141_2813271                           5946  18 +     11226  
i Chiropotes_albinasus.k141_2813271                      T 5180 n 2
s Chiropotes_israelita.k141_747660                           98758 371 +    146308  
i Chiropotes_israelita.k141_747660                       T 2961 C 0
s Chiropotes_sagulatus.k141_1421488                          30566 371 -     50570  
i Chiropotes_sagulatus.k141_1421488                      T 2960 C 0
s Chlorocebus_aethiops.ctg25                              18430470 496 -  18827391  
i Chlorocebus_aethiops.ctg25                             C 0 I 305
s Chlorocebus_pygerythrus.k141_1025673                       16904 873 -     50209  
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135423905 871 + 135778131  
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1912478 801 +   2368649  
i Colobus_angolensis.KN981557.1                          I 603 C 0
s Colobus_guereza.LG01                                   199950726 802 + 200372422  
i Colobus_guereza.LG01                                   I 603 C 0
s Colobus_polykomos.k141_906115                              39002 802 +     84244  
i Colobus_polykomos.k141_906115                          I 599 C 0
s Erythrocebus_patas.Contig38                             21207070 874 -  21539334  
i Erythrocebus_patas.Contig38                            C 0 C 0
s Gorilla_beringei.k141_3596273                              17881 873 -     32273  
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186340018 873 + 186649187  
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hoolock_leuconedys.ctg274                                    436685 874 +    630532  
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Lophocebus_aterrimus.ctg367                              1439028 881 +   1826925  
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                               8849 869 +     40492  
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59678103 869 +  60120075  
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 14621 869 -     26193  
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            82397 869 -    114318  
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  8088 869 -     23192  
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                17552 869 -     29190  
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  26130 869 +     37952  
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186841209 869 + 187317192  
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25459785 869 -  25927173  
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  81986 869 +     89720  
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 8979 869 +     20474  
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   8776 869 -     14993  
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  331638 869 -    668171  
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 7088 869 -     24072  
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               27719 869 -     45290  
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23939299 881 -  24302211  
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353416 876 +    752769  
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Miopithecus_ogouensis.k141_534055                          10981 874 -     28506  
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Nasalis_larvatus.k141_413338                               17008 900 +     21681  
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Pan_paniscus.KQ411613.1                                    45985 871 +     80009  
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03001836.1                             31897 873 +     51860  
i Pan_troglodytes.NBAG03001836.1                         I 747 I 629
s Papio_anubis.CM001495.2                                183445101 881 + 183742232  
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             8751 881 +     20448  
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20565559 881 +  20919399  
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   7491 881 +     41871  
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    10784 881 +     27711  
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  1783 881 -     11374  
i Papio_ursinus.k141_5274964                             C 0 C 0
s Piliocolobus_badius.k141_1142974                             208 775 +     68526  
i Piliocolobus_badius.k141_1142974                       N 0 C 0
s Piliocolobus_gordonorum.k141_381342                        40354 775 +     89929  
i Piliocolobus_gordonorum.k141_381342                    I 615 C 0
s Piliocolobus_kirkii.k141_448987                            41768 775 +     51399  
i Piliocolobus_kirkii.k141_448987                        I 615 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14298011 769 -  14605196  
i Piliocolobus_tephrosceles.PDMG02000141.1               I 615 C 0
s Pithecia_albicans.k141_1476471                              4027 368 +     26961  
i Pithecia_albicans.k141_1476471                         T 2964 C 0
s Pithecia_chrysocephala.k141_839575                           169 371 +     23417  
i Pithecia_chrysocephala.k141_839575                     T 2949 C 0
s Pithecia_hirsuta.k141_305604                                4019 368 +     29694  
i Pithecia_hirsuta.k141_305604                           T 2964 C 0
s Pithecia_mittermeieri.k141_446740                          29045 368 +     52772  
i Pithecia_mittermeieri.k141_446740                      T 2964 C 0
s Pithecia_pissinattii.k141_1824269                           4041 368 +     26198  
i Pithecia_pissinattii.k141_1824269                      T 2964 C 0
s Pithecia_pithecia.tarseq_165                             3940588 370 +   4542175  
i Pithecia_pithecia.tarseq_165                           T 2947 C 0
s Pithecia_vanzolinii.k141_1697688                            4005 368 -     23490  
i Pithecia_vanzolinii.k141_1697688                       T 2964 C 0
s Plecturocebus_bernhardi.k141_2549090                        8259 377 -     39866  
i Plecturocebus_bernhardi.k141_2549090                   T 2973 C 0
s Plecturocebus_brunneus.k141_1495506                        17425 377 +     34906  
i Plecturocebus_brunneus.k141_1495506                    T 2970 C 0
s Plecturocebus_caligatus.k141_1382851                       21689 377 +     87950  
i Plecturocebus_caligatus.k141_1382851                   T 2968 C 0
s Plecturocebus_cinerascens.k141_1164729                     22516 377 +     88961  
i Plecturocebus_cinerascens.k141_1164729                 T 2968 C 0
s Plecturocebus_cupreus.k141_2351393                          8187 377 +     39403  
i Plecturocebus_cupreus.k141_2351393                     T 2967 C 0
s Plecturocebus_dubius.k141_1058799                          21974 375 -     87928  
i Plecturocebus_dubius.k141_1058799                      T 2963 I 1
s Plecturocebus_grovesi.k141_2013005                         28927 377 +     60166  
i Plecturocebus_grovesi.k141_2013005                     T 2972 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      29124 377 +     67232  
i Plecturocebus_hoffmannsi.k141_3303950                  T 2971 C 0
s Plecturocebus_miltoni.k141_349282                          24597 377 +     90634  
i Plecturocebus_miltoni.k141_349282                      T 2971 C 0
s Plecturocebus_moloch.k141_1031110                          21969 377 -     89403  
i Plecturocebus_moloch.k141_1031110                      T 2972 C 0
s Pongo_abelii.NDHI03003595.1                                 3832 873 -     34550  
i Pongo_abelii.NDHI03003595.1                            C 0 I 60
s Pongo_pygmaeus.ctg66                                     9572615 873 +   9816681  
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               75193 900 -     81375  
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              7010 900 +     19060  
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Pygathrix_cinerea.k141_1153803                             16994 900 -     91421  
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7611140 878 +   7812017  
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             17019 900 -     72585  
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             8713 884 -     11128  
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91238062 899 - 195417433  
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7673724 884 +   7961872  
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Semnopithecus_entellus.k141_1672505                         1889 878 -     12572  
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      28741 878 +     39453  
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                            9249 878 +     27826  
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             8783 880 -     19483  
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      2088 878 -     12762  
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           1936 878 +     13763  
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Theropithecus_gelada.CM009954.1                        186430407 881 + 186847797  
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                         12835 877 -     20410  
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      1950 878 -     12674  
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       12943 877 +     19930  
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                       9338 877 -     19997  
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            49483 877 -     60166  
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        16945 878 -     27529  
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     16895 878 -     18194  
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                          10607 878 -     21137  
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                    9308 877 -     10723  
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         8484 878 +      9834  
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        26807 878 +     32220  
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5940904 878 +   6242583  
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       10156 877 +     20839  
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
e Lagothrix_lagothricha.k141_1005387                         15287   0 -     38430 C
e Ateles_paniscus.k141_457735                                21129   0 +     72325 C
e Ateles_marginatus.k141_803263                              13240   0 -     40414 C
e Ateles_geoffroyi_a.k141_833924                                8856   0 -     89868 C
e Ateles_chamek.k141_1806455                                 27084   0 -     30947 C
e Ateles_belzebuth.k141_445860                               44280   0 -     48001 C
e Ateles_geoffroyi_b.tarseq_1536                             21209484   0 -  21539123 C
e Echinops_telfairi.JH980293.1                            48781881  13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441   0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202   0 +      8798 C
e Galago_senegalensis.k141_631886                             7400   0 +     11339 C
e Galago_moholi.ctg2040                                     429710   0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280  56 -     80660 I
e Sapajus_apella.ctg103                                    5422039  56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698  57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554  57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481  57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802  57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707  57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365  57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731  56 -      7576 I
e Saguinus_midas.LG03                                    209476296  66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403  57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771  57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323  57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639  66 +     42994 I
e Mico_schneideri.k141_916733                                        599  57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012  57 +      1399 I
e Mico_argentatus.k141_1024458                                 599  57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687  57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983  57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367  57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680  57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338  57 +     64341 I
e Cebus_unicolor.k141_1837183                                 1748  56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019  56 +     28840 I
e Cebus_albifrons.Contig27                                25654081  56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600  57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658   0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574  57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760  57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899  57 +      5377 I
e Callimico_goeldii.k141_737284                                604  57 -     31217 I
e Callibella_humilis.k141_10318                                963  57 +     27907 I
e Aotus_vociferans.k141_344750                               30359  57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235  57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626  57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199  57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201  57 -     33861 I
e Alouatta_seniculus.k141_117119                             16471   0 +     50774 C
e Alouatta_puruensis.k141_362188                              2019   0 +      5663 C
e Alouatta_palliata.k141_2135620                              5287   0 +     47717 C
e Alouatta_nigerrima.k141_1929159                             1292   0 +     30492 C
e Alouatta_macconnelli.k141_918386                            2334   0 -      9457 C
e Alouatta_juara.k141_1302312                                 1197  57 +     27940 I
e Alouatta_discolor.k141_566626                              12779   0 +     28687 C
e Alouatta_caraya.k141_1701091                                2327   0 -     36483 C
e Alouatta_belzebul.k141_3560514                              9218   0 +     51355 C
e Mus_pahari.LT608297.1                                   31356171  20 -  89631738 I
e Mus_spretus.CM004101.1                                  90753558  20 - 130317789 I
e Mus_musculus.chr8                                       87651497  20 - 129401213 I
e Mus_caroli.LT608237.1                                   84362512  20 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476  16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445   0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734   0 -     33856 C
e Perodicticus_potto.k141_1186926                              597   0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219   0 -      3244 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      16031  16 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Xerus_inauris.XerIna_scaffold_2302                          2289  11 +    224448 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 12422 320 -     43706 T
e Vicugna_pacos.KN270157.1                                 5372964  16 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851580  13 -   5085361 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   54478  14 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15739083  18 +  33153633 I
e Tupaia_tana.TupTan_flattened_line_97126                    10418  13 -     10553 I
e Tupaia_chinensis.KB320699.1                              2156971  13 +   4065304 I
e Trichechus_manatus.JH594705.1                            4294941  30 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_40725                     797  18 +     27266 I
e Tonatia_saurophila.TonSau_scaffold_294                     82385  30 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   7580  14 +      8208 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              106564  10 +    114563 I
e Tarsius_wallacei.k141_254427                                1877   3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080   3 +     70052 I
e Tapirus_terrestris.TapTer_scaffold_755                    388291  19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821  19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73860  14 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                12005  18 +     41958 I
e Symphalangus_syndactylus.tarseq_199                      1093192   0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6812310   9 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629              19505  15 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             32197  13 +     97271 I
e Spermophilus_dauricus.KZ294078.1                         1955257  36 -   3870691 I
e Sorex_araneus.JH798187.1                                13652179  20 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4928   8 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_42075                     1435  20 -     30804 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    154382  15 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                89023  18 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        368189  17 -   3329780 I
e Rattus_norvegicus.chr16                                 53571726  38 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  6452  13 +     55207 I
e Puma_concolor.QAVW01001104.1                            20275474  22 -  38429054 I
e Pteropus_vampyrus.KN534172.1                                8028  12 -      8028 I
e Pteropus_alecto.KB030862.1                              22977975  18 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         41723  13 +     42204 I
e Pteronotus_parnellii.KE909381.1                            16321  33 -     21811 I
e Psammomys_obesus.NESX01036370.1                            11540  20 -     21651 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790  14 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_32310           35577  18 +     35617 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             2956  18 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9883  18 +     63832 I
e Petromus_typicus.PetTyp_scaffold_42190                     29272  10 -     29689 I
e Peromyscus_maniculatus.KI615324.1                       18195914  20 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690  60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13820  11 -     78924 I
e Pantholops_hodgsonii.KE114653.1                          1265873  11 -   2937107 I
e Panthera_tigris.KE722367.1                               4722402  24 -   8748460 I
e Panthera_pardus.KV860321.1                                265522  24 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  152313  24 +    230217 I
e Ovis_canadensis.OviCan_scaffold_2572                      174955  25 -    191736 I
e Ovis_aries.CM001607.2                                   17586978  17 +  44047080 I
e Otocyon_megalotis.JAEUCK010005147.1                       463984 325 -    559221 T
e Oryctolagus_cuniculus.CM000791.1                        67148837  19 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271  14 -     18566 I
e Orcinus_orca.KB316932.1                                  2782838  18 -  10937097 I
e Onychomys_torridus.OnyTor_scaffold_2986                    81338  20 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   26299  20 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77710  15 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         145831   4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              507863  13 -   2017862 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Ochotona_princeps.JH802162.1                             1365383  19 +   3988456 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869   0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414   0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947   0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9150892 182 -   9404916 T
e Noctilio_leporinus.NocLep_scaffold_251                    759056  18 +    783361 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866929  18 +   7148211 I
e Neomonachus_schauinslandi.NINY01007730.1                20308720  13 +  31847680 I
e Nannospalax_galili.KL204047.1                            2035666   6 -   3037898 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190475  14 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_281845                        1174  18 +      1835 I
e Myotis_lucifugus.GL429869.1                              3905022  18 -   4330536 I
e Myotis_davidii.KB100139.1                                1588925  18 -   6019432 I
e Myotis_brandtii.KE162005.1                                281670  16 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     72319  10 -     80779 I
e Mustela_putorius.JH418006.1                               302916  13 -  14710649 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           8028  18 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398   7 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1878   9 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 142833  33 -    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                    27960  18 -    437263 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7127  13 -      8324 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             35221   4 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1851541   4 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11261648  20 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                17041  33 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593  14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    4451  18 +     10310 I
e Mesocricetus_auratus.KB708134.1                         12183350  20 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 33894  20 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365             11521  13 +     13704 I
e Megaderma_lyra.MegLyr_scaffold_4542                        14530  18 -    207569 I
e Marmota_marmota.CZRN01000018.1                          33104398  36 -  40650429 I
e Manis_pentadactyla.KN006162.1                              51430  45 -    317179 I
e Manis_javanica.JSZB01003497.1                              19444  13 +    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_8222                 91834  18 +     94391 I
e Lycaon_pictus.CM007581.1                                17956957 950 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653  30 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268845  18 -    662738 I
e Lepus_americanus.LepAme_scaffold_107385                     7936  19 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044260  13 +   3914936 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Lasiurus_borealis.LasBor_scaffold_50988                    16348  23 +     29960 I
e Kogia_breviceps.KogBre_flattened_line_192630                3156  18 -      3359 I
e Jaculus_jaculus.JH725527.1                               8278294  16 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_48101               23781  18 +     23964 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7522111  36 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      84244  10 +    135385 I
e Hylobates_pileatus_a.tarseq_633                            3336052   0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157   0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374   0 +     14092 C
e Hylobates_agilis.k141_232023                                2330   0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  46186  26 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_101188                274  17 +      9903 I
e Hipposideros_armiger.JXIK01000431.1                       111703  17 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577   3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337  14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20663359  10 +  22651954 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 19003  19 +     36099 I
e Helogale_parvula.HelPar_flattened_line_2585               243500  20 +    327341 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Graphiurus_murinus.GraMur_scaffold_10447                   33784  11 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            32101  11 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609797  17 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_108840               2625  14 -      9135 I
e Galagoides_demidoff.k141_1711393                            4689   0 +     41679 C
e Fukomys_damarensis.KN121974.1                             851588   3 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                 10705  24 -     36744 I
e Felis_catus_fca126.CM031415.1                           20196951  24 + 205367284 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Eubalaena_japonica.EubJap_flattened_line_31514             26195  18 -     44125 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           12242  18 +    133382 I
e Erinaceus_europaeus.JH835339.1                           3329391  13 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467  19 +    498745 I
e Equus_caballus.CM000403.2                               18532438  19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631  19 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2146933  18 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16330809  13 -  41312741 I
e Ellobius_talpinus.LOJH01081419.1                            1571  20 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          21665  20 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311832  13 +    607251 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    37538  10 +     67921 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115  19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363  19 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8631289  33 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812577  18 +  35494412 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64708  14 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  37007  10 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838258   8 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             29655  20 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_37019               4120  20 -     19598 I
e Cricetulus_griseus.LT883664.1                           11668649  21 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 51209  20 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           1672  18 +     23735 I
e Condylura_cristata.JH655891.1                           17549224  15 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1254065  10 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1687  14 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542  19 -     25243 I
e Cephalopachus_bancanus.k141_1423433                         6085   3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     94740   9 +    217609 I
e Castor_canadensis.CasCan_scaffold_2074                    138470  15 +    179628 I
e Carollia_perspicillata.CarPer_scaffold_92756                6282  30 -     11696 I
e Carlito_syrichta.NW_007259797.1                           156587   3 -    496798 I
e Capromys_pilorides.CapPil_scaffold_65020                    2136  10 -     12242 I
e Capra_hircus.CM004588.1                                 18061518  11 -  44709034 I
e Capra_aegagrus.CM003241.1                               18830798  11 +  46296322 I
e Canis_lupus_orion.HG994398.1                            18502019 950 +  63665305 I
e Canis_lupus_familiaris.chr16                            17960717 950 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9036246 952 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     1546 950 -     43241 I
e CanFam4.chr16                                           17800803 952 -  60362399 I
e Camelus_ferus.KB017975.1                                  404222  16 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2335923  16 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10003447  16 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2820170  21 +   4408762 I
e Bos_taurus.CM000184.6                                   18200538  21 - 114055384 I
e Bos_mutus.JH880303.1                                     1126420  17 -   1948126 I
e Bos_indicus.CM003028.1                                  18363564  21 - 116941312 I
e Bison_bison.KN261452.1                                    200679  13 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    27602  14 +     34529 I
e Balaenoptera_bonaerensis.DF707048.1                         3395  18 -     18090 I
e Balaenoptera_acutorostrata.KI537508.1                   15192930  18 +  23207421 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  5924  48 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         538   0 +      5281 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      13823  11 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             99169  11 -    100397 I
e Anoura_caudifer.AnoCau_scaffold_1412                      186541  33 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676680  15 -   2318259 I
e Allactaga_bullata.AllBul_scaffold_9566                     75595  13 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             80852  13 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9511778  13 -  29979442 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     71931  20 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           828466  23 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       9513 17 +     62944 A----TT--TATGTTTACACTTA
s Acinonyx_jubatus.LLWD01001279.1                           828489  9 -   1699592 acttatg--ta------------
i Acinonyx_jubatus.LLWD01001279.1                        I 23 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511791  9 -  29979442 ACTTATC--TA------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 13 C 0
s Ailurus_fulgens.LNAC01001112.1                             80865  9 -    347723 ACTTATT--TC------------
i Ailurus_fulgens.LNAC01001112.1                         I 13 C 0
s Allenopithecus_nigroviridis.k141_3361533                   17410 17 -     52922 A----TT--TATTTGTACACTTA
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         17338 17 -     28001 A----TT--TATTTGTACACTTA
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          7838 17 -     18505 A----TT--TATTTGTACACTTA
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           8688 17 -     12518 A----TT--TATTTGTACACTTA
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          676695  5 -   2318259 g----tt--ta------------
i Ammotragus_lervia.NIVO01071767.1                       I 15 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      186574  5 +    412891 A----CT--TA------------
i Anoura_caudifer.AnoCau_scaffold_1412                   I 33 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5972  5 +     43469 A----TT--TA------------
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 48 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15192948  5 +  23207421 a----tt--ta------------
i Balaenoptera_acutorostrata.KI537508.1                  I 18 C 0
s Balaenoptera_bonaerensis.DF707048.1                         3413  5 -     18090 a----tt--ta------------
i Balaenoptera_bonaerensis.DF707048.1                    I 18 C 0
s Bison_bison.KN261452.1                                    200692  5 -    288883 a----tt--ta------------
i Bison_bison.KN261452.1                                 I 13 C 0
s Bos_indicus.CM003047.1                                  20273877  5 +  48749331 g----tt--ta------------
i Bos_indicus.CM003047.1                                 I 80 C 0
s Bos_mutus.JH880303.1                                     1126437  5 -   1948126 g----tt--ta------------
i Bos_mutus.JH880303.1                                   I 17 C 0
s Bos_taurus.CM000203.6                                   18084515  5 +  45695690 g----tt--ta------------
i Bos_taurus.CM000203.6                                  I 80 C 0
s Bubalus_bubalis.KI419123.1                               2820191  5 +   4408762 g----tt--ta------------
i Bubalus_bubalis.KI419123.1                             I 21 C 0
s Cacajao_ayresi.k141_552049                                102007 17 -    122966 T----TT--TATTTACACACTTA
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   61512 17 +     81800 T----TT--TATTTACACACTTA
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  30692 17 -     95584 T----TT--TATTTACACACTTA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         54793 17 -    119600 T----TT--TATTTACACACTTA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10003463  5 -  17673402 a----tt--ta------------
i Camelus_bactrianus.KN276810.1                          I 16 I 9
s Camelus_dromedarius.KN272107.1                           2335939  5 -   7040546 a----tt--ta------------
i Camelus_dromedarius.KN272107.1                         I 16 I 9
s Camelus_ferus.KB017975.1                                  404238  5 -   1652518 a----tt--ta------------
i Camelus_ferus.KB017975.1                               I 16 I 9
s Capra_aegagrus.CM003241.1                               18830809  5 +  46296322 g----tt--ta------------
i Capra_aegagrus.CM003241.1                              I 11 C 0
s Capra_hircus.CM004588.1                                 18061529  5 -  44709034 g----tt--ta------------
i Capra_hircus.CM004588.1                                I 11 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6312  5 -     11696 A----TT--TA------------
i Carollia_perspicillata.CarPer_scaffold_92756           I 30 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     94749  5 +    217609 A----TT--TA------------
i Catagonus_wagneri.CatWag_scaffold_2839                 I 9 C 0
s Cercocebus_atys.KQ010504.1                               4478367 17 +   4669795 A----TT--TATTTGTACACTTa
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        2861 17 +     17872 A----TT--TATTTGTATACTTA
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           3456 17 -     14043 A----TT--TATTTGTACACTTA
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          11551 17 +     27781 A----TT--TATTTGTACACTTA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        11698 17 -     20310 A----TT--TATTTGTACACTTA
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          14678 17 +     29689 A----TT--TATTTGTACACTTA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            9434 17 -     20078 A----TT--TATTTGTACACTTA
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          17356 17 -     27936 A----TT--TATTTGTACACTTA
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            6218 17 -     17152 A----TT--TATTTGTACACTTA
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38825948 17 +  39242232 A----TT--TATTTGTACACTTA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21225452 17 -  21565898 A----TT--TATTTGTACACTTA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       42575 17 -     53127 A----TT--TATTTGTACACTTA
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        2821 17 +     13442 A----TT--TATTTGTACACTTA
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       17367 17 -     27947 A----TT--TATTTGTACACTTA
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         17347 17 +     17596 A----TT--TATTTGCACACTTA
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          3403 17 +     14005 A----TT--TATTTGTACACTTA
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1701  6 -      8501 C----CT-TCC------------
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       I 14 I 9
s Cheracebus_lucifer.k141_49986                                620 17 -     17098 T----TT--TATTTATACACTTA
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                               496 17 +     17877 T----TT--TATTTATACACTTA
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            158063 17 -    216457 T----TT--TATTTATACACTTA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          62538 17 +     76511 T----TT--TATTTATACACTTA
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chiropotes_israelita.k141_747660                           99129 17 +    146308 T----TT--TATTTACACACTTA
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          30937 17 -     50570 T----TT--TATTTACACACTTA
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18431271 17 -  18827391 A----TT--TATTTGTACACTTA
i Chlorocebus_aethiops.ctg25                             I 305 C 0
s Chlorocebus_pygerythrus.k141_1025673                       17777 17 -     50209 A----TT--TATTTGTACACTTA
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135424776 17 + 135778131 A----TT--TATTTGTACACtta
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1913279 17 +   2368649 A----TT--TATTTGTACACtta
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199951528 17 + 200372422 A----TT--TATTTGTACACTTA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              39804 17 +     84244 A----TT--TATTTGTACACTTA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549239  5 -  53390261 A----CT--TA------------
i Condylura_cristata.JH655891.1                          I 15 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1690  5 +     23735 A----TT--TA------------
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      I 18 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               4140  3 -     19598 A----TA----------------
i Crocidura_indochinensis.CroInd_scaffold_37019          I 20 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29675  9 -     87169 ACTTATG--TG------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 20 C 0
s Dasypus_novemcinctus.JH564415.1                            64722  6 +   2246927 T----CT-TCC------------
i Dasypus_novemcinctus.JH564415.1                        I 14 I 9
s Delphinapterus_leucas.KZ290073.1                        16812595  5 +  35494412 a----tt--ta------------
i Delphinapterus_leucas.KZ290073.1                       I 18 C 0
s Desmodus_rotundus.KZ672289.1                             8631322  5 +  20541912 a----tt--ta------------
i Desmodus_rotundus.KZ672289.1                           I 33 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       311845  5 +    607251 g----tt--ta------------
i Elaphurus_davidianus.JRFZ01104969.1                    I 13 C 0
s Enhydra_lutris.KZ291758.1                               16330822  9 -  41312741 AATTATT--TC------------
i Enhydra_lutris.KZ291758.1                              I 13 C 0
s Eptesicus_fuscus.JH977646.1                              2146951  5 -  14770903 A----TT--TA------------
i Eptesicus_fuscus.JH977646.1                            I 18 C 0
s Erinaceus_europaeus.JH835339.1                           3329404  5 -   7059049 A----TT--TA------------
i Erinaceus_europaeus.JH835339.1                         I 13 C 0
s Erythrocebus_patas.Contig38                             21207944 17 -  21539334 A----TT--TATTTGTATACTTA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12260  5 +    133382 A----TT--TA------------
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 18 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             26213  5 -     44125 A----TT--TA------------
i Eubalaena_japonica.EubJap_flattened_line_31514         I 18 C 0
s Felis_catus.CM001381.2                                  20238132  9 + 206538554 acttatg--ta------------
i Felis_catus.CM001381.2                                 I 24 C 0
s Felis_catus_fca126.CM031415.1                           20196975  9 + 205367284 ACTTATG--TA------------
i Felis_catus_fca126.CM031415.1                          I 24 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 10729  9 -     36744 ACTTATG--TA------------
i Felis_nigripes.FelNig_flattened_line_20823             I 24 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               2639 15 -      9135 A----TT--TATTT--AAATTTA
i Galeopterus_variegatus.GalVar_scaffold_108840          I 14 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     609814  5 -    660261 g----tt--ta------------
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 17 C 0
s Gorilla_beringei.k141_3596273                              18754 17 -     32273 A----TT--TATGTTTACACTTA
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186340891 17 + 186649187 A----TT--TATGTTTACACtta
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243520  9 +    327341 ACTTATG--TA------------
i Helogale_parvula.HelPar_flattened_line_2585            I 20 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 19022  5 +     36099 G----TT--TA------------
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 19 C 0
s Hipposideros_armiger.JXIK01000431.1                       111720  4 +   1711038 a----tt--t-------------
i Hipposideros_armiger.JXIK01000431.1                    I 17 I 1
s Hipposideros_galeritus.HipGal_scaffold_101188                291  4 +      9903 A----TT--T-------------
i Hipposideros_galeritus.HipGal_scaffold_101188          I 17 C 0
s Hoolock_leuconedys.ctg274                                    437559 17 +    630532 A----TT--TATTTGTACACTTA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46212  9 +     55795 ACTTATG--TA------------
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 26 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               23799  5 +     23964 A----TT--TA------------
i Inia_geoffrensis.IniGeo_flattened_line_48101           I 18 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                3174  5 -      3359 A----TT--TA------------
i Kogia_breviceps.KogBre_flattened_line_192630           I 18 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    17605  5 -     42476 A----TT--TA------------
i Lasiurus_borealis.LasBor_scaffold_32767                I 78 I 24
s Leptonychotes_weddellii.KB714746.1                       3044273  9 +   3914936 acttatt--ta------------
i Leptonychotes_weddellii.KB714746.1                     I 13 C 0
s Lipotes_vexillifer.KE559953.1                             268863  5 -    662738 a----tt--ta------------
i Lipotes_vexillifer.KE559953.1                          I 18 C 0
s Lophocebus_aterrimus.ctg367                              1439909 17 +   1826925 A----TT--TATTTGTACACTTA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                               9718 17 +     40492 A----TT--TATTTGTACACTTA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59678972 17 +  60120075 A----TT--TATTTGTACACTTA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 15490 17 -     26193 A----TT--TATTTGTACACTTA
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            83266 17 -    114318 A----TT--TATTTGTACACTTA
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  8957 17 -     23192 A----TT--TATTTGTACACTTA
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                18421 17 -     29190 A----TT--TATTTGTACACTTA
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  26999 17 +     37952 A----TT--TATTTGTACACTTA
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842078 17 + 187317192 A----TT--TATTTGTACACTTa
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25460654 17 -  25927173 A----TT--TATTTGTACACTTa
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  82855 17 +     89720 A----TT--TATTTGTACACTTA
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 9848 17 +     20474 A----TT--TATTTGTACACTTA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   9645 17 -     14993 A----TT--GATTTGTACACTTA
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  332507 17 -    668171 A----TT--TATTTGTACACTTA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 7957 17 -     24072 A----TT--TATTTGTACACTTA
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               28588 17 -     45290 A----TT--TATTTGTACACTTA
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91852  5 +     94391 A----TT--TA------------
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 18 C 0
s Mandrillus_leucophaeus.scaffold280                      23940180 17 -  24302211 A----TT--TATTTGTACACTCA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354292 17 +    752769 A----TT--TATTTGTACACTTA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              19457  6 +    737560 -----TGCAta------------
i Manis_javanica.JSZB01003497.1                          I 13 C 0
s Manis_pentadactyla.KN006162.1                              51475  6 -    317179 -----tgcata------------
i Manis_pentadactyla.KN006162.1                          I 45 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        14548  1 -    207569 A----------------------
i Megaderma_lyra.MegLyr_scaffold_4542                    I 18 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             11534  9 +     13704 ACTTATT--TC------------
i Mellivora_capensis.MelCap_flattened_line_69365         I 13 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    4469  5 +     10310 A----TT--TA------------
i Mesoplodon_bidens.MesBid_scaffold_108144               I 18 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                17074  5 -     19307 A----TT--TA------------
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 33 C 0
s Miopithecus_ogouensis.k141_534055                          11855 17 -     28506 A----TT--TATTTGTACACTTA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         7140  9 -      8324 ACTTATT--TA------------
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 13 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    27978  5 -    437263 A----TT--TA------------
i Monodon_monoceros.MonMon_M_scaffold_103                I 18 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142866  5 -    366855 T----TT--TA------------
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 33 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   1887  5 +     82753 G----TT--TA------------
i Moschus_moschiferus.MosMos_scaffold_13123              I 9 C 0
s Murina_feae.MurFea_scaffold_85699                           8046  5 +     14753 A----TT--TA------------
i Murina_feae.MurFea_scaffold_85699                      I 18 C 0
s Mustela_putorius.JH418006.1                               302929  9 -  14710649 ACGTATT--TC------------
i Mustela_putorius.JH418006.1                            I 13 C 0
s Myotis_brandtii.KE162005.1                                281686  5 -  10118263 A----TT--TA------------
i Myotis_brandtii.KE162005.1                             I 16 T 1743
s Myotis_davidii.KB100139.1                                1588943  5 -   6019432 A----TT--TA------------
i Myotis_davidii.KB100139.1                              I 18 C 0
s Myotis_lucifugus.GL429869.1                              3905040  5 -   4330536 A----TT--TA------------
i Myotis_lucifugus.GL429869.1                            I 18 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                        1192  5 +      1835 A----TT--TA------------
i Myotis_myotis.MyoMyo_scaffold_281845                   I 18 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190489  5 +    196477 T----CT--CC------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 14 I 9
s Nasalis_larvatus.k141_413338                               17908 17 +     21681 A----TT--TATTTGTACACTTA
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308733  9 +  31847680 acttatt--ta------------
i Neomonachus_schauinslandi.NINY01007730.1               I 13 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5866947  5 +   7148211 a----tt--ta------------
i Neophocaena_asiaeorientalis.KZ687982.1                 I 18 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    759074  5 +    783361 A----TT--TA------------
i Noctilio_leporinus.NocLep_scaffold_251                 I 18 C 0
s Odobenus_rosmarus.KB229312.1                              507876  9 -   2017862 ACTTATT--TA------------
i Odobenus_rosmarus.KB229312.1                           I 13 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          77725  5 -    150152 g----tt--ta------------
i Okapia_johnstoni.LVCL01S0005463.1                      I 15 C 0
s Orcinus_orca.KB316932.1                                  2782856  5 -  10937097 a----tt--ta------------
i Orcinus_orca.KB316932.1                                I 18 C 0
s Ovis_aries.CM001607.2                                   17586995  5 +  44047080 g----tt--ta------------
i Ovis_aries.CM001607.2                                  I 17 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      174980  5 -    191736 G----TT--TA------------
i Ovis_canadensis.OviCan_scaffold_2572                   I 25 C 0
s Pan_paniscus.KQ411613.1                                    46856 17 +     80009 A----TT--TATGTTTACACtta
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189145732 17 + 189151597 a----tt--tatgtttacactta
i Pan_troglodytes.CM009242.2                             I 864 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152337  9 +    230217 ACTTATG--TA------------
i Panthera_onca.PanOnc_flattened_line_3271               I 24 C 0
s Panthera_pardus.KV860321.1                                265546  9 +  18783137 acttatg--ta------------
i Panthera_pardus.KV860321.1                             I 24 C 0
s Panthera_tigris.KE722367.1                               4722426  9 -   8748460 acttatg--ta------------
i Panthera_tigris.KE722367.1                             I 24 C 0
s Pantholops_hodgsonii.KE114653.1                          1265884  5 -   2937107 g----tt--ta------------
i Pantholops_hodgsonii.KE114653.1                        I 11 C 0
s Papio_anubis.CM001495.2                                183445982 17 + 183742232 A----TT--TATTTGTACACTTa
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             9632 17 +     20448 A----TT--TATTTGTACACTTA
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20566440 17 +  20919399 A----TT--TATTTGTACACTTA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   8372 17 +     41871 A----TT--TATTTGTACACTTA
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    11665 17 +     27711 A----TT--TATTTGTACACTTA
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  2664 17 -     11374 A----TT--TATTTGTACACTTA
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13831  9 -     78924 ACTTACA--TA------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 11 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               9901  5 +     63832 A----TT--TA------------
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 18 C 0
s Piliocolobus_badius.k141_1142974                             983 17 +     68526 A----TT--TATTTGTACACTTA
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        41129 17 +     89929 A----TT--TATTTGTACACTTA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            42543 17 +     51399 A----TT--TATTTGTACACTTA
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14298780 17 -  14605196 A----TT--TATTTGTACACTTA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2974  5 +     22620 A----TT--TA------------
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 18 C 0
s Pithecia_albicans.k141_1476471                              4395 17 +     26961 T----TT--TATTTAAACACTTA
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                           540 17 +     23417 T----TT--TATTTATACACTTA
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                4387 17 +     29694 T----TT--TATTTAAACACTTA
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          29413 17 +     52772 T----TT--TATTTAAACACTTA
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           4409 17 +     26198 T----TT--TATTTAAACACTTA
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3940958 17 +   4542175 T----TT--TATTTATACACTTA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            4373 17 -     23490 T----TT--TATTTAAACACTTA
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_32310           35595  5 +     35617 A----TT--TA------------
i Platanista_gangetica.PlaMin_flattened_line_32310       I 18 C 0
s Plecturocebus_bernhardi.k141_2549090                        8636 17 -     39866 T----TT--TATTTATACACTTA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        17802 17 +     34906 T----TT--TATTTATACACTTA
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       22066 17 +     87950 T----TT--TATTTATACACTTA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     22893 17 +     88961 T----TT--TATTTATACACTTA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8564 17 +     39403 T----TT--TATTTATACACTTA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          22350 12 -     87928 -----------TTTATACACTTA
i Plecturocebus_dubius.k141_1058799                      I 1 C 0
s Plecturocebus_grovesi.k141_2013005                         29304 17 +     60166 T----TT--TATTTATACACTTA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      29501 17 +     67232 T----TT--TATTTATACACTTA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          24974 17 +     90634 T----TT--TATTTATACACTTA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          22346 17 -     89403 T----TT--TATTTATACACTTA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189133879 17 + 189387572 a----tt--tatttgtacACTTA
i Pongo_abelii.CM009266.2                                T 23652 C 0
s Pongo_pygmaeus.ctg66                                     9573488 17 +   9816681 A----TT--TATTTGTACACTTA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76093 17 -     81375 A----TT--TATTTGTACACTTA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              7910 17 +     19060 A----TT--TATTTGTACACTTA
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Pteronotus_parnellii.KE909381.1                            16354  5 -     21811 a----tt--ta------------
i Pteronotus_parnellii.KE909381.1                        I 33 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41736  9 +     42204 ACTTATT--TC------------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 13 C 0
s Pteropus_alecto.KB030862.1                              22977993  5 +  28871421 N----NN--NN------------
i Pteropus_alecto.KB030862.1                             I 18 C 0
s Puma_concolor.QAVW01001104.1                            20275496  9 -  38429054 acttatg--ta------------
i Puma_concolor.QAVW01001104.1                           I 22 C 0
s Pygathrix_cinerea.k141_1153803                             17894 17 -     91421 A----TT--TATTTGTACACTTA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612018 17 +   7812017 A----TT--TATTTGTACACTTA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             17919 17 -     72585 A----TT--TATTTGTACACTTA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6465  5 +     55207 G----TT--TA------------
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 13 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        368206  3 -   3329780 a----tt----------------
i Rhinolophus_sinicus.LVEH01000134.1                     I 17 I 3
s Rhinopithecus_bieti.k119_217274                             9597 17 -     11128 A----TT--TATTTGTACACTTA
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91238961 17 - 195417433 A----TT--TATTTGTACACTta
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7674608 17 +   7961872 A----TT--TATTTGTACACTTA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89041  5 -     96226 A----TT--TA------------
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 18 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154397  5 -    313613 A----TT--TA------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 15 C 0
s Semnopithecus_entellus.k141_1672505                         2767 17 -     12572 A----TT--TATTTGTACACTTA
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      29619 17 +     39453 A----TT--TATTTGTACACTTA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           10127 17 +     27826 A----TT--TATTTGTACACTTA
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             9663 17 -     19483 A----TT--TATTTGTACACTTA
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      2966 17 -     12762 A----TT--TATTTGTACACTTA
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           2814 17 +     13763 A----TT--TATTTGTACACTTA
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               4936  3 +   1910179 A----TT----------------
i Solenodon_paradoxus.SolPar_flattened_line_126          I 8 I 5
s Sorex_araneus.JH798187.1                                13652199  5 -  18376816 A----TG--TG------------
i Sorex_araneus.JH798187.1                               I 20 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             32210  9 +     97271 TTTTATT--TC------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 13 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              19520  9 -    196729 AATTATG--TA------------
i Suricata_suricatta.SurSur_flattened_line_6629          I 15 C 0
s Sus_scrofa.CM000828.4                                    6812319  5 +  69701581 a----tt--ta------------
i Sus_scrofa.CM000828.4                                  I 9 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                12023  5 +     41958 A----GT--TA------------
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 18 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73874  5 +    116680 T----CT--CC------------
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 14 I 9
s Theropithecus_gelada.CM009954.1                        186431288 17 + 186847797 A----TT--TATTTGTACACTTa
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   7594  6 +      8208 T----CT-TCC------------
i Tolypeutes_matacus.TolMat_scaffold_228639              I 14 I 9
s Tonatia_saurophila.TonSau_scaffold_294                     82415  5 +    610378 A----TT--TA------------
i Tonatia_saurophila.TonSau_scaffold_294                 I 30 C 0
s Trachypithecus_auratus.k141_722599                         13712 17 -     20410 A----TT--TATTTGTACACTTA
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      2828 17 -     12674 A----TT--TATTTGTACACTTA
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       13820 17 +     19930 A----TT--TATTTGTACACTTA
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      10215 17 -     19997 A----TT--TATTTGTACACTTA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            50360 17 -     60166 A----TT--TATTTGTACACTTA
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        17823 17 -     27529 A----TT--TATTTGTACACTTA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     17773 17 -     18194 A----TT--TATTTGTACACTTA
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                          11485 17 -     21137 A----TT--TATTTGTACACTTA
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                   10185 17 -     10723 A----TT--TATTTGTACACTTA
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         9362 17 +      9834 A----TT--TATTTGTACACTTA
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        27685 17 +     32220 A----TT--TATTTGTACACTTA
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5941782 17 +   6242583 A----TT--TATTTGTACACTTA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11033 17 +     20839 A----TT--TATTTGTACACTTA
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                     815  4 +     27266 a----ag--t-------------
i Tragulus_javanicus.TraJav_scaffold_40725               I 18 C 0
s Tupaia_chinensis.KB320699.1                              2156984  5 +   4065304 A----TT--GA------------
i Tupaia_chinensis.KB320699.1                            I 13 I 193
s Tupaia_tana.TupTan_flattened_line_97126                    10431  5 -     10553 A----CT--GA------------
i Tupaia_tana.TupTan_flattened_line_97126                I 13 N 0
s Tursiops_truncatus.MRVK01000835.1                       15739101  5 +  33153633 a----tt--ta------------
i Tursiops_truncatus.MRVK01000835.1                      I 18 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54492  5 -     77625 A----TT--TA------------
i Uropsilus_gracilis.UroGra_scaffold_12083               I 14 C 0
s Ursus_maritimus.KK499267.1                               4851593  9 -   5085361 ACTTATC--CA------------
i Ursus_maritimus.KK499267.1                             I 13 C 0
s Vicugna_pacos.KN270157.1                                 5372980  5 -   5488506 a----tt--ta------------
i Vicugna_pacos.KN270157.1                               I 16 C 0
e Lagothrix_lagothricha.k141_1005387                         15287  0 -     38430 C
e Ateles_paniscus.k141_457735                                21129  0 +     72325 C
e Ateles_marginatus.k141_803263                              13240  0 -     40414 C
e Ateles_geoffroyi_a.k141_833924                                8856  0 -     89868 C
e Ateles_chamek.k141_1806455                                 27084  0 -     30947 C
e Ateles_belzebuth.k141_445860                               44280  0 -     48001 C
e Ateles_geoffroyi_b.tarseq_1536                             21209484  0 -  21539123 C
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Alouatta_seniculus.k141_117119                             16471  0 +     50774 C
e Alouatta_puruensis.k141_362188                              2019  0 +      5663 C
e Alouatta_palliata.k141_2135620                              5287  0 +     47717 C
e Alouatta_nigerrima.k141_1929159                             1292  0 +     30492 C
e Alouatta_macconnelli.k141_918386                            2334  0 -      9457 C
e Alouatta_juara.k141_1302312                                 1197 57 +     27940 I
e Alouatta_discolor.k141_566626                              12779  0 +     28687 C
e Alouatta_caraya.k141_1701091                                2327  0 -     36483 C
e Alouatta_belzebul.k141_3560514                              9218  0 +     51355 C
e Mus_pahari.LT608297.1                                   31356171 20 -  89631738 I
e Mus_spretus.CM004101.1                                  90753558 20 - 130317789 I
e Mus_musculus.chr8                                       87651497 20 - 129401213 I
e Mus_caroli.LT608237.1                                   84362512 20 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      16031 16 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Xerus_inauris.XerIna_scaffold_2302                          2289 11 +    224448 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 12422 320 -     43706 T
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              106564 10 +    114563 I
e Tarsius_wallacei.k141_254427                                1877  3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080  3 +     70052 I
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spermophilus_dauricus.KZ294078.1                         1955257 36 -   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_42075                     1435 20 -     30804 I
e Rattus_norvegicus.chr16                                 53571726 38 +  90668790 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Psammomys_obesus.NESX01036370.1                            11540 20 -     21651 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Petromus_typicus.PetTyp_scaffold_42190                     29272 10 -     29689 I
e Peromyscus_maniculatus.KI615324.1                       18195914 20 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Otocyon_megalotis.JAEUCK010005147.1                       463984 325 -    559221 T
e Oryctolagus_cuniculus.CM000791.1                        67148837 19 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Onychomys_torridus.OnyTor_scaffold_2986                    81338 20 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   26299 20 +     28053 I
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Ochotona_princeps.JH802162.1                             1365383 19 +   3988456 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9150892 182 -   9404916 T
e Nannospalax_galili.KL204047.1                            2035666  6 -   3037898 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     72319 10 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             35221  4 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1851541  4 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11261648 20 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12183350 20 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 33894 20 +    140813 I
e Marmota_marmota.CZRN01000018.1                          33104398 36 -  40650429 I
e Lycaon_pictus.CM007581.1                                17956957 950 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     7936 19 -     14121 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Jaculus_jaculus.JH725527.1                               8278294 16 -   9596543 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7522111 36 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      84244 10 +    135385 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20663359 10 +  22651954 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Graphiurus_murinus.GraMur_scaffold_10447                   33784 11 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            32101 11 +     49224 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Fukomys_damarensis.KN121974.1                             851588  3 +   3816255 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Ellobius_talpinus.LOJH01081419.1                            1571 20 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          21665 20 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    37538 10 +     67921 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  37007 10 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838258  8 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11668649 21 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 51209 20 +     63868 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1254065 10 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Cephalopachus_bancanus.k141_1423433                         6085  3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Castor_canadensis.CasCan_scaffold_2074                    138470 15 +    179628 I
e Carlito_syrichta.NW_007259797.1                           156587  3 -    496798 I
e Capromys_pilorides.CapPil_scaffold_65020                    2136 10 -     12242 I
e Canis_lupus_orion.HG994398.1                            18502019 950 +  63665305 I
e Canis_lupus_familiaris.chr16                            17960717 950 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9036246 952 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     1546 950 -     43241 I
e CanFam4.chr16                                           17800803 952 -  60362399 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    27602 14 +     34529 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      13823 11 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             99169 11 -    100397 I
e Allactaga_bullata.AllBul_scaffold_9566                     75595 13 -     89534 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     71931 20 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       9530 14 +     62944 GA-------T----------AT--G------------TATGT----------------A------T------A
s Acinonyx_jubatus.LLWD01001279.1                           828498 16 -   1699592 ta-------c----ttatgaat--t------------t--------------------a------t------a
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 5
s Acomys_cahirinus.AcoCah_scaffold_12655                     71951  4 +     87051 ---------------------T--G------------A--------------------A--------------
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 20 I 546
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511800 16 -  29979442 TA-------CTTA----TAAAG--T------------T--------------------G------T------A
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 5
s Ailurus_fulgens.LNAC01001112.1                             80874 16 -    347723 TA-------C-TCA---TAAAG--T------------T--------------------A------T------A
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 5
s Allactaga_bullata.AllBul_scaffold_9566                     75608  6 -     89534 ---------------------C--A------------T--------------------A------T------A
i Allactaga_bullata.AllBul_scaffold_9566                 I 13 I 10
s Allenopithecus_nigroviridis.k141_3361533                   17427 10 -     52922 GA-------T----------AT--G------------T--------------------A------T------G
i Allenopithecus_nigroviridis.k141_3361533               C 0 I 4
s Allochrocebus_lhoesti.k141_4309873                         17355 10 -     28001 GA-------T----------AT--G------------T--------------------A------T------G
i Allochrocebus_lhoesti.k141_4309873                     C 0 I 4
s Allochrocebus_preussi.k141_1442296                          7855 10 -     18505 GA-------T----------AT--G------------T--------------------A------T------G
i Allochrocebus_preussi.k141_1442296                     C 0 I 4
s Allochrocebus_solatus.k141_166128                           8705 10 -     12518 GA-------T----------AT--G------------T--------------------A------T------G
i Allochrocebus_solatus.k141_166128                      C 0 I 4
s Ammotragus_lervia.NIVO01071767.1                          676700 16 -   2318259 ta-------t----gtatgttt--t------------t--------------------a------t------a
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 5
s Anoura_caudifer.AnoCau_scaffold_1412                      186579 16 +    412891 TA-------T--A-TG-TATAT--A------------T--------------------A------C------T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             99180 15 -    100397 -A-------TGTA-TG-T--AT--T------------T--------------------A------T------A
i Antilocapra_americana.AntAmePen_scaffold_12469         I 11 I 5
s Aplodontia_rufa.AprRuf_scaffold_68852                      13834  8 +     20879 ---------------------TATG------------T--------------------T------T------A
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 11 I 12
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5977 16 +     43469 TA-------T--A-TG-TATAT--A------------T--------------------G------C------A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15192953 27 +  23207421 caggtatatt----ttatatgt--g--------tatac--------------------t------t------A
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 5
s Balaenoptera_bonaerensis.DF707048.1                         3418 27 -     18090 caggtatatt----ttatatgt--g--------tatac--------------------t------t------A
i Balaenoptera_bonaerensis.DF707048.1                    C 0 I 5
s Beatragus_hunteri.BeaHun_scaffold_50177                    27616  6 +     34529 ---------------------T--T------------T--------------------A------T------A
i Beatragus_hunteri.BeaHun_scaffold_50177                I 14 I 5
s Bison_bison.KN261452.1                                    200697 16 -    288883 ta-------t----gtatatat--t------------t--------------------a------t------a
i Bison_bison.KN261452.1                                 C 0 I 5
s Bos_indicus.CM003047.1                                  20273882 16 +  48749331 ta-------t----gtatatat--t------------t--------------------a------t------a
i Bos_indicus.CM003047.1                                 C 0 I 5
s Bos_mutus.JH880303.1                                     1126442 16 -   1948126 ta-------t----gtatatat--t------------t--------------------a------t------a
i Bos_mutus.JH880303.1                                   C 0 I 5
s Bos_taurus.CM000203.6                                   18084520 16 +  45695690 ta-------t----gtatatat--t------------t--------------------a------t------a
i Bos_taurus.CM000203.6                                  C 0 I 5
s Bubalus_bubalis.KI419123.1                               2820196 16 +   4408762 ta-------t----gtatatat--t------------t--------------------a------t------a
i Bubalus_bubalis.KI419123.1                             C 0 I 5
s Cacajao_ayresi.k141_552049                                102024 10 -    122966 AA-------T----------AT--G------------T--------------------G------T------G
i Cacajao_ayresi.k141_552049                             C 0 I 5
s Cacajao_calvus.k141_5142                                   61529 10 +     81800 AA-------T----------AT--G------------T--------------------G------T------G
i Cacajao_calvus.k141_5142                               C 0 I 5
s Cacajao_hosomi.k141_81245                                  30709 10 -     95584 AA-------T----------AT--G------------T--------------------G------T------G
i Cacajao_hosomi.k141_81245                              C 0 I 5
s Cacajao_melanocephalus.k141_619699                         54810 10 -    119600 AA-------T----------AT--G------------T--------------------G------T------G
i Cacajao_melanocephalus.k141_619699                     C 0 I 5
s Camelus_bactrianus.KN276810.1                           10003477  5 -  17673402 ------------------------a------------t--------------------a------t------a
i Camelus_bactrianus.KN276810.1                          I 9 I 7
s Camelus_dromedarius.KN272107.1                           2335953  5 -   7040546 ------------------------a------------t--------------------a------t------a
i Camelus_dromedarius.KN272107.1                         I 9 I 7
s Camelus_ferus.KB017975.1                                  404252  5 -   1652518 ------------------------a------------t--------------------a------t------a
i Camelus_ferus.KB017975.1                               I 9 I 7
s Capra_aegagrus.CM003241.1                               18830814 16 +  46296322 ta-------t----gtatgttt--t------------t--------------------g------t------a
i Capra_aegagrus.CM003241.1                              C 0 I 5
s Capra_hircus.CM004588.1                                 18061534 16 -  44709034 ta-------t----gtatgttt--t------------t--------------------g------t------a
i Capra_hircus.CM004588.1                                C 0 I 5
s Capromys_pilorides.CapPil_scaffold_65020                    2146  6 -     12242 ---------------------A--A------------T--------------------A------T------G
i Capromys_pilorides.CapPil_scaffold_65020               I 10 I 8
s Carollia_perspicillata.CarPer_scaffold_92756                6317 16 -     11696 TA-------T--A-TG-TATAT--A------------T--------------------G------C------A
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138485  6 +    179628 ---------------------T--A------------T--------------------T------T------G
i Castor_canadensis.CasCan_scaffold_2074                 I 15 I 10
s Catagonus_wagneri.CatWag_scaffold_2839                     94754 28 +    217609 TA-------TGTA----TATAT--TTCTGTGTGTATAC--------------------A------C------A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 5
s Cercocebus_atys.KQ010504.1                               4478384 10 +   4669795 ga-------t----------at--g------------t--------------------g------t------g
i Cercocebus_atys.KQ010504.1                             C 0 I 4
s Cercocebus_chrysogaster.k141_1540778                        2878 10 +     17872 GA-------T----------AT--G------------T--------------------G------T------G
i Cercocebus_chrysogaster.k141_1540778                   C 0 I 4
s Cercocebus_lunulatus.k141_3342297                           3473 10 -     14043 GA-------T----------AT--G------------T--------------------G------T------G
i Cercocebus_lunulatus.k141_3342297                      C 0 I 4
s Cercocebus_torquatus.k141_3057011                          11568 10 +     27781 GA-------T----------AT--G------------T--------------------G------T------G
i Cercocebus_torquatus.k141_3057011                      C 0 I 4
s Cercopithecus_ascanius.k141_1024104                        11715 10 -     20310 GA-------T----------AT--G------------T--------------------A------T------G
i Cercopithecus_ascanius.k141_1024104                    C 0 I 4
s Cercopithecus_cephus.k141_1078548                          14695 10 +     29689 GA-------T----------AT--G------------T--------------------A------T------G
i Cercopithecus_cephus.k141_1078548                      C 0 I 4
s Cercopithecus_diana.k141_1150327                            9451 10 -     20078 GA-------T----------AT--G------------T--------------------A------T------G
i Cercopithecus_diana.k141_1150327                       C 0 I 4
s Cercopithecus_hamlyni.k141_187466                          17373 10 -     27936 GA-------T----------AT--G------------T--------------------A------T------G
i Cercopithecus_hamlyni.k141_187466                      C 0 I 4
s Cercopithecus_lowei.k141_1854285                            6235 10 -     17152 GA-------T----------AT--G------------T--------------------A------T------G
i Cercopithecus_lowei.k141_1854285                       C 0 I 4
s Cercopithecus_albogularis.ctg5                                38825965 10 +  39242232 GA-------T----------AT--G------------T--------------------A------T------G
i Cercopithecus_albogularis.ctg5                               C 0 I 4
s Cercopithecus_mona.ctg39                                21225469 10 -  21565898 GA-------T----------AT--G------------T--------------------A------T------G
i Cercopithecus_mona.ctg39                               C 0 I 4
s Cercopithecus_neglectus.k141_2526306                       42592 10 -     53127 GA-------T----------AT--G------------T--------------------A------T------G
i Cercopithecus_neglectus.k141_2526306                   C 0 I 4
s Cercopithecus_nictitans.k141_1119862                        2838 10 +     13442 GA-------T----------AT--G------------T--------------------A------T------G
i Cercopithecus_nictitans.k141_1119862                   C 0 I 4
s Cercopithecus_petaurista.k141_807961                       17384 10 -     27947 GA-------T----------AT--G------------T--------------------A------T------G
i Cercopithecus_petaurista.k141_807961                   C 0 I 4
s Cercopithecus_pogonias.k141_822820                         17364 10 +     17596 GA-------T----------AT--G------------T--------------------A------T------G
i Cercopithecus_pogonias.k141_822820                     C 0 I 4
s Cercopithecus_roloway.k141_2581234                          3420 10 +     14005 GA-------T----------AT--G------------T--------------------A------T------G
i Cercopithecus_roloway.k141_2581234                     C 0 I 4
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1716 12 -      8501 TG-------C----------AA--G-C-G--------T--------------------G------T------A
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       I 9 I 8
s Cheracebus_lucifer.k141_49986                                637 10 -     17098 GA-------T----------AT--G------------T--------------------G------T------G
i Cheracebus_lucifer.k141_49986                          C 0 I 5
s Cheracebus_lugens.k141_1393925                               513 10 +     17877 GA-------T----------AT--G------------T--------------------G------T------G
i Cheracebus_lugens.k141_1393925                         C 0 I 5
s Cheracebus_regulus.k141_471822                            158080 10 -    216457 GA-------T----------AT--G------------T--------------------G------T------G
i Cheracebus_regulus.k141_471822                         C 0 I 5
s Cheracebus_torquatus.k141_1170026                          62555 10 +     76511 GA-------T----------AT--G------------T--------------------G------T------G
i Cheracebus_torquatus.k141_1170026                      C 0 I 5
s Chinchilla_lanigera.JH722012.1                           1254075  6 +   2543920 ---------------------t--a------------c--------------------a------t------a
i Chinchilla_lanigera.JH722012.1                         I 10 I 6
s Chiropotes_israelita.k141_747660                           99146 10 +    146308 AA-------T----------AT--G------------T--------------------G------T------G
i Chiropotes_israelita.k141_747660                       C 0 I 5
s Chiropotes_sagulatus.k141_1421488                          30954 10 -     50570 AA-------T----------AT--G------------T--------------------G------T------G
i Chiropotes_sagulatus.k141_1421488                      C 0 I 5
s Chlorocebus_aethiops.ctg25                              18431288 10 -  18827391 GA-------T----------AT--G------------C--------------------A------T------G
i Chlorocebus_aethiops.ctg25                             C 0 I 4
s Chlorocebus_pygerythrus.k141_1025673                       17794 10 -     50209 GA-------T----------AT--G------------T--------------------A------T------G
i Chlorocebus_pygerythrus.k141_1025673                   C 0 I 4
s Chlorocebus_sabaeus.CM001947.1                         135424793 10 + 135778131 gg-------t----------at--g------------t--------------------a------t------g
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 4
s Colobus_angolensis.KN981557.1                            1913296 10 +   2368649 ga-------t----------at--g------------t--------------------a------t------g
i Colobus_angolensis.KN981557.1                          C 0 I 4
s Colobus_guereza.LG01                                   199951545 10 + 200372422 GA-------T----------AT--G------------T--------------------A------T------G
i Colobus_guereza.LG01                                   C 0 I 4
s Colobus_polykomos.k141_906115                              39821 10 +     84244 GA-------T----------AT--G------------T--------------------A------T------G
i Colobus_polykomos.k141_906115                          C 0 I 4
s Condylura_cristata.JH655891.1                           17549244 16 -  53390261 TA-------TGCA----TATCT--T------------T--------------------G------T------A
i Condylura_cristata.JH655891.1                          C 0 I 10
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1695 16 +     23735 TA-------TTTA----TATGT--T------------T--------------------A------T------A
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 I 6
s Cricetomys_gambianus.CriGam_scaffold_18520                 51229  1 +     63868 ---------------------T---------------------------------------------------
i Cricetomys_gambianus.CriGam_scaffold_18520             I 20 I 536
s Cricetulus_griseus.LT883664.1                           11668670  1 + 224834208 ---------------------T---------------------------------------------------
i Cricetulus_griseus.LT883664.1                          I 21 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29684 16 -     87169 TA-------CCT----CTAATT--G------------T--------------------A------T------G
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 5
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37017  6 +     51376 ---------------------A--A------------C--------------------A------T------G
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 10 I 8
s Dasypus_novemcinctus.JH564415.1                            64737 10 +   2246927 TC-------T----------AA--T------------T--------------------G------T------A
i Dasypus_novemcinctus.JH564415.1                        I 9 I 8
s Delphinapterus_leucas.KZ290073.1                        16812600 27 +  35494412 caggtatatt----ttatatgt--g--------tatac--------------------t------t------A
i Delphinapterus_leucas.KZ290073.1                       C 0 I 5
s Desmodus_rotundus.KZ672289.1                             8631327 16 +  20541912 ta-------t----atgcatat--a------------t--------------------g------c------a
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37548 22 +     67921 ---------------------T--G------------T----ATATATATATATATATA------T------A
i Dinomys_branickii.DinBra_scaffold_21862                I 10 I 6
s Elaphurus_davidianus.JRFZ01104969.1                       311850 16 +    607251 ta-------t----gtacatat--t------------t--------------------a------t------a
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 5
s Ellobius_lutescens.LOEQ01008920.1                          21685  6 -    110024 ---------------------C--G------------T--------------------A------T------A
i Ellobius_lutescens.LOEQ01008920.1                      I 20 I 591
s Ellobius_talpinus.LOJH01081419.1                            1591  6 +      8657 ---------------------C--G------------T--------------------A------T------A
i Ellobius_talpinus.LOJH01081419.1                       I 20 I 591
s Enhydra_lutris.KZ291758.1                               16330831 16 -  41312741 TA-------CTTA----TAAAG--T------------T--------------------A------C------A
i Enhydra_lutris.KZ291758.1                              C 0 I 5
s Eptesicus_fuscus.JH977646.1                              2146956 13 -  14770903 TA-------T--A--Ggtacat--a------------c-----------------------------------
i Eptesicus_fuscus.JH977646.1                            C 0 I 11
s Erinaceus_europaeus.JH835339.1                           3329409 20 -   7059049 CA-------GGTAAAGATATGT--T------------T--------------------A------T------A
i Erinaceus_europaeus.JH835339.1                         C 0 I 5
s Erythrocebus_patas.Contig38                             21207961 10 -  21539334 GA-------T----------AT--G------------T--------------------A------T------G
i Erythrocebus_patas.Contig38                            C 0 I 4
s Eschrichtius_robustus.EscRob_flattened_line_8968           12265 27 +    133382 GAGGTATATTTTA----TATGT--GT--------ATAC--------------------T------T------A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 5
s Eubalaena_japonica.EubJap_flattened_line_31514             26218 27 -     44125 CAGGTATATTTTA----TATGT--GT--------ATAC--------------------T------T------A
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 I 5
s Felis_catus.CM001381.2                                  20238141 16 + 206538554 ta-------c----ttatgaat--t------------t--------------------a------t------a
i Felis_catus.CM001381.2                                 C 0 I 5
s Felis_catus_fca126.CM031415.1                           20196984 16 + 205367284 TA-------CTTA-TGA---AT--T------------T--------------------A------T------A
i Felis_catus_fca126.CM031415.1                          C 0 I 5
s Felis_nigripes.FelNig_flattened_line_20823                 10738 16 -     36744 TA-------CTTA-TGA---AT--T------------T--------------------A------T------A
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 5
s Fukomys_damarensis.KN121974.1                             851591  1 +   3816255 ------------------------------------------------------------------------G
i Fukomys_damarensis.KN121974.1                          I 3 I 8
s Galeopterus_variegatus.GalVar_scaffold_108840               2654 10 -      9135 CA-------T----------AT--G------------T--------------------A------C------T
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 I 8
s Giraffa_tippelskirchi.LVKQ01S007888.1                     609819 14 -    660261 ta-------t----gtatatat--t------------t--------------------c--------------
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 I 1
s Glis_glis.GliGli_scaffold_19807                            32112 12 +     49224 ---------------------T--A------------T--------------------ATTTATAT------G
i Glis_glis.GliGli_scaffold_19807                        I 11 I 16
s Gorilla_beringei.k141_3596273                              18771 14 -     32273 GA-------T----------AT--G------------TATGT----------------A------T------A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186340908 14 + 186649187 ga-------t----------at--g------------tatgt----------------a------t------a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33795  6 +     78134 ---------------------T--A------------T--------------------A------T------G
i Graphiurus_murinus.GraMur_scaffold_10447               I 11 I 14
s Helogale_parvula.HelPar_flattened_line_2585               243529 14 +    327341 TA-------C-T---TCTAATT--T------------T--------------------A--------------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 3
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 19027 16 +     36099 TA-------TGTA-TG-T--TT--T------------T--------------------A------T------A
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 I 5
s Heterocephalus_glaber.JH602082.1                        20663369  6 +  22651954 ---------------------T--A------------T--------------------A------T------G
i Heterocephalus_glaber.JH602082.1                       I 10 I 8
s Hipposideros_armiger.JXIK01000431.1                       111725 16 +   1711038 ta-------t----ttatatat--t------------t--------------------a------t------a
i Hipposideros_armiger.JXIK01000431.1                    I 1 I 6
s Hipposideros_galeritus.HipGal_scaffold_101188                295 16 +      9903 TA-------TTTA----TATAT--T------------T--------------------A------T------A
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 I 6
s Hoolock_leuconedys.ctg274                                    437576 10 +    630532 GA-------T----------AT--G------------T--------------------A------T------G
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46221 16 +     55795 TA-------CTTA----TAAAT--G------------T--------------------A------C------A
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 5
s Hystrix_cristata.HysCri_scaffold_5660                      84254  6 +    135385 ---------------------T--A------------T--------------------A------T------G
i Hystrix_cristata.HysCri_scaffold_5660                  I 10 I 8
s Ictidomys_tridecemlineatus.JH393364.1                    7522147  6 -   7955117 ---------------------t--g------------t--------------------t------t------a
i Ictidomys_tridecemlineatus.JH393364.1                  I 36 I 10
s Inia_geoffrensis.IniGeo_flattened_line_48101               23804 27 +     23964 CAGGTATATTTTA----TATGT--G-C-------ATAC--------------------T------T------A
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 I 5
s Jaculus_jaculus.JH725527.1                               8278310  6 -   9596543 ---------------------c--a------------t--------------------a------t------g
i Jaculus_jaculus.JH725527.1                             I 16 I 10
s Kogia_breviceps.KogBre_flattened_line_192630                3179 27 -      3359 CAGGTATATTTTA----TATGT--GT--------ATAC--------------------T------T------A
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 I 5
s Lasiurus_borealis.LasBor_scaffold_50988                    16371 13 +     29960 TA-------T--A--GGTACAT--A------------C-----------------------------------
i Lasiurus_borealis.LasBor_scaffold_50988                I 23 I 22
s Leptonychotes_weddellii.KB714746.1                       3044282 16 +   3914936 ta-------c----tcataaag--t------------t--------------------a------t------a
i Leptonychotes_weddellii.KB714746.1                     C 0 I 5
s Lepus_americanus.LepAme_scaffold_107385                     7955  6 -     14121 ---------------------T--A------------T--------------------A------T------G
i Lepus_americanus.LepAme_scaffold_107385                I 19 I 12
s Lipotes_vexillifer.KE559953.1                             268868 27 -    662738 caggtatatt----ttatatgt--g--------tatac--------------------t------t------A
i Lipotes_vexillifer.KE559953.1                          C 0 I 5
s Lophocebus_aterrimus.ctg367                              1439926 10 +   1826925 GA-------T----------AT--G------------T--------------------G------T------G
i Lophocebus_aterrimus.ctg367                            C 0 I 4
s Macaca_arctoides.k141_2326796                               9735 10 +     40492 GA-------T----------AT--G------------T--------------------G------T------G
i Macaca_arctoides.k141_2326796                          C 0 I 4
s Macaca_assamensis.Contig5                               59678989 10 +  60120075 GA-------T----------AT--G------------T--------------------G------T------G
i Macaca_assamensis.Contig5                              C 0 I 4
s Macaca_cyclopis.k119_18836                                 15507 10 -     26193 GA-------T----------AT--G------------T--------------------G------T------G
i Macaca_cyclopis.k119_18836                             C 0 I 4
s Macaca_fascicularis.k141_814140                            83283 10 -    114318 GA-------T----------AT--G------------T--------------------G------T------G
i Macaca_fascicularis.k141_814140                        C 0 I 4
s Macaca_fuscata.k119_255327                                  8974 10 -     23192 GA-------T----------AT--G------------T--------------------G------T------G
i Macaca_fuscata.k119_255327                             C 0 I 4
s Macaca_leonina.k141_3550399                                18438 10 -     29190 GA-------T----------AT--G------------T--------------------G------T------G
i Macaca_leonina.k141_3550399                            C 0 I 4
s Macaca_maura.k141_2733130                                  27016 10 +     37952 GA-------T----------AT--G------------T--------------------G------T------G
i Macaca_maura.k141_2733130                              C 0 I 4
s Macaca_mulatta.NC_041758.1                             186842095 10 + 187317192 ga-------t----------at--g------------t--------------------g------t------g
i Macaca_mulatta.NC_041758.1                             C 0 I 4
s Macaca_nemestrina.KQ007038.1                            25460671 10 -  25927173 ga-------t----------at--g------------t--------------------g------t------g
i Macaca_nemestrina.KQ007038.1                           C 0 I 4
s Macaca_nigra.k141_1655396                                  82872 10 +     89720 GA-------T----------AT--G------------T--------------------G------T------G
i Macaca_nigra.k141_1655396                              C 0 I 4
s Macaca_radiata.k141_3680011                                 9865 10 +     20474 GA-------T----------AT--G------------T--------------------G------T------G
i Macaca_radiata.k141_3680011                            C 0 I 4
s Macaca_siberu.k141_635500                                   9662 10 -     14993 GA-------T----------AT--G------------T--------------------G------T------G
i Macaca_siberu.k141_635500                              C 0 I 4
s Macaca_silenus.Contig273                                  332524 10 -    668171 GA-------T----------AT--G------------T--------------------G------T------G
i Macaca_silenus.Contig273                               C 0 I 4
s Macaca_thibetana.k99_256239                                 7974 10 -     24072 GA-------T----------AT--G------------T--------------------G------T------G
i Macaca_thibetana.k99_256239                            C 0 I 4
s Macaca_tonkeana.k141_1498238                               28605 10 -     45290 GA-------T----------AT--G------------T--------------------G------T------G
i Macaca_tonkeana.k141_1498238                           C 0 I 4
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91857 16 +     94391 TA-------TTTA----TAGAT--T------------T--------------------A------T------A
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 5
s Mandrillus_leucophaeus.scaffold280                      23940197 10 -  24302211 GA-------T----------AT--G------------T--------------------G------T------G
i Mandrillus_leucophaeus.scaffold280                     C 0 I 4
s Mandrillus_sphinx.Contig270                               354309 10 +    752769 GA-------T----------AT--G------------T--------------------G------T------G
i Mandrillus_sphinx.Contig270                            C 0 I 4
s Manis_javanica.JSZB01003497.1                              19463 15 +    737560 ca-------a---ttattatat--t------------t--------------------a--------------
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              51481 15 -    317179 ca-------a---ttattatat--t------------t--------------------a--------------
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33104434  6 -  40650429 ---------------------t--g------------t--------------------t------t------a
i Marmota_marmota.CZRN01000018.1                         I 36 I 10
s Megaderma_lyra.MegLyr_scaffold_4542                        14549 14 -    207569 ---------TTTA-TG-T--AT--T------------T--------------------A------T------A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 6
s Mellivora_capensis.MelCap_flattened_line_69365             11543 16 +     13704 TA-------C-TCA---TAAAG--T------------T--------------------A------T------A
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 5
s Meriones_unguiculatus.MerUng_scaffold_7390                 33914  6 +    140813 ---------------------T--G------------T--------------------A------T------A
i Meriones_unguiculatus.MerUng_scaffold_7390             I 20 I 596
s Mesocricetus_auratus.KB708134.1                         12183370  6 -  29670104 ---------------------t--g------------t--------------------a------t------a
i Mesocricetus_auratus.KB708134.1                        I 20 I 611
s Mesoplodon_bidens.MesBid_scaffold_108144                    4474 27 +     10310 CAGGTATATTTTA----TATGT--GT--------ATAC--------------------T------T------A
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 I 5
s Micronycteris_hirsuta.MicHir_scaffold_52381                17079 16 -     19307 TA-------T--A-TG-TATAT--A------------T--------------------G------C------A
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11261668  6 -  27267610 ---------------------T--G------------T--------------------A------T------A
i Microtus_ochrogaster.CM001695.1                        I 20 I 590
s Miopithecus_ogouensis.k141_534055                          11872 10 -     28506 GA-------T----------AT--G------------T--------------------A------T------G
i Miopithecus_ogouensis.k141_534055                      C 0 I 4
s Mirounga_angustirostris.MirAng_flattened_line_93702         7149 16 -      8324 TA-------C-TCA---TAAAG--T------------T--------------------A------T------A
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 5
s Monodon_monoceros.MonMon_M_scaffold_103                    27983 27 -    437263 CAGGTATATTTTA----TATGT--GT--------ATAC--------------------T------T------A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 5
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142871 16 -    366855 TA-------T--A-TG-TATAT--A------------C--------------------A------C------A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   1892 16 +     82753 TA-------TGTA----TATAT--T------------T--------------------A------T------A
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 5
s Murina_feae.MurFea_scaffold_85699                           8051 14 +     14753 TA-------T--A--GGTACAT--A------------C--------------------A--------------
i Murina_feae.MurFea_scaffold_85699                      C 0 I 12
s Mus_caroli.LT608237.1                                   84362532  6 - 120012414 ---------------------T--G------------T--------------------A------T------A
i Mus_caroli.LT608237.1                                  I 20 I 357
s Mus_musculus.chr8                                       87651517  6 - 129401213 ---------------------T--G------------T--------------------A------T------A
i Mus_musculus.chr8                                      I 20 I 871
s Mus_pahari.LT608297.1                                   31356191  6 -  89631738 ---------------------t--g------------t--------------------a------c------a
i Mus_pahari.LT608297.1                                  I 20 I 930
s Mus_spretus.CM004101.1                                  90753578  6 - 130317789 ---------------------T--G------------T--------------------A------T------A
i Mus_spretus.CM004101.1                                 I 20 I 1301
s Mustela_putorius.JH418006.1                               302938 16 -  14710649 TA-------C-TCA---TAAAG--T------------T--------------------A------T------A
i Mustela_putorius.JH418006.1                            C 0 I 5
s Myocastor_coypus.MyoCoy_scaffold_10123                     72329  6 -     80779 ---------------------A--A------------T--------------------A------T------G
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 10 I 7
s Myotis_brandtii.KE162005.1                                279948 14 -  10118263 TA-------T--A--GATACat--a------------c--------------------a--------------
i Myotis_brandtii.KE162005.1                             T 1743 I 1755
s Myotis_davidii.KB100139.1                                1588948 13 -   6019432 TA-------T--A--GGtacat--a------------c-----------------------------------
i Myotis_davidii.KB100139.1                              C 0 I 10
s Myotis_lucifugus.GL429869.1                              3905045 14 -   4330536 TA-------T--A--GGTACAt--a------------c--------------------a--------------
i Myotis_lucifugus.GL429869.1                            C 0 I 12
s Myotis_myotis.MyoMyo_scaffold_281845                        1197 14 +      1835 TA-------T--A--GGTACAT--A------------C--------------------A--------------
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 I 12
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190503 10 +    196477 TG-------C----------AA--A------------T--------------------T------T------G
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 9 I 9
s Nannospalax_galili.KL204047.1                            2035672  6 -   3037898 ---------------------T--A------------T--------------------C------T------A
i Nannospalax_galili.KL204047.1                          I 6 I 1022
s Nasalis_larvatus.k141_413338                               17925 11 +     21681 GA-------C----------GT--GT-----------T--------------------A------T------G
i Nasalis_larvatus.k141_413338                           C 0 I 4
s Neomonachus_schauinslandi.NINY01007730.1                20308742 16 +  31847680 ta-------c----tcataaag--t------------t--------------------a------t------a
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 5
s Neophocaena_asiaeorientalis.KZ687982.1                   5866952 27 +   7148211 caggtatatt----ttatatgt--g--------tatac--------------------t------t------A
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 5
s Noctilio_leporinus.NocLep_scaffold_251                    759079 16 +    783361 TA-------T--A-TG-TACAT--A------------T--------------------A------C------A
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Ochotona_princeps.JH802162.1                             1365402  6 +   3988456 ---------------------t--a------------t--------------------a------t------g
i Ochotona_princeps.JH802162.1                           I 19 I 8
s Odobenus_rosmarus.KB229312.1                              507885 15 -   2017862 TA-------C-TCA---TA-AG--T------------T--------------------A------T------A
i Odobenus_rosmarus.KB229312.1                           C 0 I 5
s Okapia_johnstoni.LVCL01S0005463.1                          77730 14 -    150152 ta-------t----gtatatat--t------------t--------------------c--------------
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 1
s Ondatra_zibethicus.OndZib_scaffold_46174                   26319  6 +     28053 ---------------------T--G------------T--------------------A------T------A
i Ondatra_zibethicus.OndZib_scaffold_46174               I 20 I 578
s Onychomys_torridus.OnyTor_scaffold_2986                    81358  6 +    102263 ---------------------T--T------------T--------------------A------C------A
i Onychomys_torridus.OnyTor_scaffold_2986                I 20 I 552
s Orcinus_orca.KB316932.1                                  2782861 27 -  10937097 caggtatatt----ttatatgt--g--------tatac--------------------t------t------A
i Orcinus_orca.KB316932.1                                C 0 I 5
s Oryctolagus_cuniculus.CM000791.1                        67148856  6 + 174332312 ---------------------t--a------------t--------------------a------t------g
i Oryctolagus_cuniculus.CM000791.1                       I 19 I 12
s Ovis_aries.CM001607.2                                   17587000 16 +  44047080 ta-------t----gtatgttt--t------------t--------------------a------t------a
i Ovis_aries.CM001607.2                                  C 0 I 5
s Ovis_canadensis.OviCan_scaffold_2572                      174985 16 -    191736 TA-------TGTA-TG-T--TT--T------------T--------------------A------T------A
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 I 5
s Pan_paniscus.KQ411613.1                                    46873 14 +     80009 ga-------t----------at--g------------tatgt----------------a------t------a
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189145749 14 + 189151597 ga-------t----------at--g------------tatgt----------------a------t------a
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152346 16 +    230217 TA-------CTTA----TCAAT--T------------T--------------------A------T------A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 5
s Panthera_pardus.KV860321.1                                265555 16 +  18783137 ta-------c----ttatcaat--t------------t--------------------a------t------a
i Panthera_pardus.KV860321.1                             C 0 I 5
s Panthera_tigris.KE722367.1                               4722435 16 -   8748460 ta-------ctTA----TCAAT--T------------T--------------------A------T------A
i Panthera_tigris.KE722367.1                             C 0 I 5
s Pantholops_hodgsonii.KE114653.1                          1265889 16 -   2937107 ta-------t----gtatgttt--t------------t--------------------a------t------a
i Pantholops_hodgsonii.KE114653.1                        C 0 I 5
s Papio_anubis.CM001495.2                                183445999 10 + 183742232 ga-------t----------at--g------------t--------------------g------t------g
i Papio_anubis.CM001495.2                                C 0 I 4
s Papio_cynocephalus.k141_4307930                             9649 10 +     20448 GA-------T----------AT--G------------T--------------------G------T------G
i Papio_cynocephalus.k141_4307930                        C 0 I 4
s Papio_hamadryas.Contig39                                20566457 10 +  20919399 GA-------T----------AT--G------------T--------------------G------T------G
i Papio_hamadryas.Contig39                               C 0 I 4
s Papio_kindae.k141_1936966                                   8389 10 +     41871 GA-------T----------AT--G------------T--------------------G------T------G
i Papio_kindae.k141_1936966                              C 0 I 4
s Papio_papio.k141_802527                                    11682 10 +     27711 GA-------T----------AT--G------------T--------------------G------T------G
i Papio_papio.k141_802527                                C 0 I 4
s Papio_ursinus.k141_5274964                                  2681 10 -     11374 GA-------T----------AT--G------------T--------------------G------T------G
i Papio_ursinus.k141_5274964                             C 0 I 4
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13840 16 -     78924 TG-------CTTA-TGA---AT--T------------T--------------------A------T------A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 5
s Peromyscus_maniculatus.KI615324.1                       18195934  6 -  18517816 ---------------------T--A------------T--------------------A------T------A
i Peromyscus_maniculatus.KI615324.1                      I 20 I 605
s Petromus_typicus.PetTyp_scaffold_42190                     29282  6 -     29689 ---------------------T--T------------T--------------------A------T------G
i Petromus_typicus.PetTyp_scaffold_42190                 I 10 I 8
s Phocoena_phocoena.PhoPho_flattened_line_24159               9906 27 +     63832 CAGGTATATTTTA----TATGT--GT--------ATAC--------------------T------T------A
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 5
s Piliocolobus_badius.k141_1142974                            1000 10 +     68526 GA-------T----------AT--G------------T--------------------A------T------G
i Piliocolobus_badius.k141_1142974                       C 0 I 4
s Piliocolobus_gordonorum.k141_381342                        41146 10 +     89929 GA-------T----------AT--G------------T--------------------A------T------G
i Piliocolobus_gordonorum.k141_381342                    C 0 I 4
s Piliocolobus_kirkii.k141_448987                            42560 10 +     51399 GA-------T----------AT--G------------T--------------------A------T------G
i Piliocolobus_kirkii.k141_448987                        C 0 I 4
s Piliocolobus_tephrosceles.PDMG02000141.1                14298797 10 -  14605196 GA-------T----------AT--G------------T--------------------C------T------G
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 4
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             2979 13 +     22620 TA-------T--A--GGTATAT--A------------C-----------------------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 11
s Pithecia_albicans.k141_1476471                              4412 10 +     26961 AA-------T----------AT--G------------T--------------------G------T------G
i Pithecia_albicans.k141_1476471                         C 0 I 5
s Pithecia_chrysocephala.k141_839575                           557 10 +     23417 AA-------T----------AT--G------------T--------------------G------T------G
i Pithecia_chrysocephala.k141_839575                     C 0 I 5
s Pithecia_hirsuta.k141_305604                                4404 10 +     29694 AA-------T----------AT--G------------T--------------------G------T------G
i Pithecia_hirsuta.k141_305604                           C 0 I 5
s Pithecia_mittermeieri.k141_446740                          29430 10 +     52772 AA-------T----------AT--G------------T--------------------G------T------G
i Pithecia_mittermeieri.k141_446740                      C 0 I 5
s Pithecia_pissinattii.k141_1824269                           4426 10 +     26198 AA-------T----------AT--G------------T--------------------G------T------G
i Pithecia_pissinattii.k141_1824269                      C 0 I 5
s Pithecia_pithecia.tarseq_165                             3940975 10 +   4542175 AA-------T----------AT--G------------T--------------------G------T------G
i Pithecia_pithecia.tarseq_165                           C 0 I 5
s Pithecia_vanzolinii.k141_1697688                            4390 10 -     23490 AA-------T----------AT--G------------T--------------------G------T------G
i Pithecia_vanzolinii.k141_1697688                       C 0 I 5
s Platanista_gangetica.PlaMin_flattened_line_32310           35600 17 +     35617 CAGGTATATTTTA----TATG----------------------------------------------------
i Platanista_gangetica.PlaMin_flattened_line_32310       C 0 N 0
s Plecturocebus_bernhardi.k141_2549090                        8653 10 -     39866 GA-------T----------AT--G------------T--------------------G------T------G
i Plecturocebus_bernhardi.k141_2549090                   C 0 I 5
s Plecturocebus_brunneus.k141_1495506                        17819 10 +     34906 GA-------T----------AT--G------------T--------------------G------T------G
i Plecturocebus_brunneus.k141_1495506                    C 0 I 5
s Plecturocebus_caligatus.k141_1382851                       22083 10 +     87950 GA-------T----------AT--G------------T--------------------G------T------G
i Plecturocebus_caligatus.k141_1382851                   C 0 I 5
s Plecturocebus_cinerascens.k141_1164729                     22910 10 +     88961 GA-------T----------AT--G------------T--------------------G------T------G
i Plecturocebus_cinerascens.k141_1164729                 C 0 I 5
s Plecturocebus_cupreus.k141_2351393                          8581 10 +     39403 GA-------T----------AT--G------------T--------------------G------T------G
i Plecturocebus_cupreus.k141_2351393                     C 0 I 5
s Plecturocebus_dubius.k141_1058799                          22362 10 -     87928 GA-------T----------AT--G------------T--------------------G------T------G
i Plecturocebus_dubius.k141_1058799                      C 0 I 5
s Plecturocebus_grovesi.k141_2013005                         29321 10 +     60166 GA-------T----------AT--G------------T--------------------G------T------G
i Plecturocebus_grovesi.k141_2013005                     C 0 I 5
s Plecturocebus_hoffmannsi.k141_3303950                      29518 10 +     67232 GA-------T----------AT--G------------T--------------------G------T------G
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 I 5
s Plecturocebus_miltoni.k141_349282                          24991 10 +     90634 GA-------T----------AT--G------------T--------------------G------T------G
i Plecturocebus_miltoni.k141_349282                      C 0 I 5
s Plecturocebus_moloch.k141_1031110                          22363 10 -     89403 GA-------T----------AT--G------------T--------------------G------T------G
i Plecturocebus_moloch.k141_1031110                      C 0 I 5
s Pongo_abelii.CM009266.2                                189133896 10 + 189387572 GA-------T----------AT--G------------T--------------------A------T------A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9573505 10 +   9816681 GA-------T----------AT--G------------T--------------------A------T------A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76110 10 -     81375 GA-------T----------GT--G------------C--------------------A------T------G
i Presbytis_comata.k141_677006                           C 0 I 4
s Presbytis_mitrata.k141_1087752                              7927 10 +     19060 GA-------T----------GT--G------------C--------------------A------T------G
i Presbytis_mitrata.k141_1087752                         C 0 I 4
s Psammomys_obesus.NESX01036370.1                            11560  6 -     21651 ---------------------T--G------------T--------------------A------T------A
i Psammomys_obesus.NESX01036370.1                        I 20 I 591
s Pteronotus_parnellii.KE909381.1                            16359 16 -     21811 ta-------t----atgtatat--a------------c--------------------a------c------a
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41745 16 +     42204 TA-------C-TCA---TAAAG--T------------T--------------------A------T------A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 5
s Pteropus_alecto.KB030862.1                              22977998 16 +  28871421 NN-------N----NNNNNNNN--N------------N--------------------N------N------N
i Pteropus_alecto.KB030862.1                             C 0 I 7
s Puma_concolor.QAVW01001104.1                            20275505 16 -  38429054 ta-------c----ttatgaat--t------------t--------------------a------t------a
i Puma_concolor.QAVW01001104.1                           C 0 I 5
s Pygathrix_cinerea.k141_1153803                             17911 10 -     91421 GA-------C----------GT--G------------T--------------------A------T------G
i Pygathrix_cinerea.k141_1153803                         C 0 I 4
s Pygathrix_nigripes_b.ctg100                                 7612035 10 +   7812017 GA-------C----------GT--G------------T--------------------A------T------G
i Pygathrix_nigripes_b.ctg100                               C 0 I 4
s Pygathrix_nigripes_a.k141_215492                             17936 16 -     72585 GA-------C----------GT--G------------T--------------------A------TATAATAA
i Pygathrix_nigripes_a.k141_215492                         C 0 I 4
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6470 16 +     55207 TA-------TGTACA--T--AT--T------------T--------------------A------T------A
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 5
s Rattus_norvegicus.chr16                                 53571764  6 +  90668790 ---------------------T--G------------T--------------------A------T------A
i Rattus_norvegicus.chr16                                I 38 I 803
s Rhinolophus_sinicus.LVEH01000134.1                        368212  7 -   3329780 --------------------at--t------------t--------------------a------t------a
i Rhinolophus_sinicus.LVEH01000134.1                     I 3 I 6
s Rhinopithecus_bieti.k119_217274                             9614 10 -     11128 GA-------T----------GT--G------------T--------------------A------T------G
i Rhinopithecus_bieti.k119_217274                        C 0 I 4
s Rhinopithecus_roxellana.NC_044550.1                     91238978 10 - 195417433 ga-------t----------gt--g------------t--------------------a------t------g
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 4
s Rhinopithecus_strykeri.ctg102                            7674625 10 +   7961872 GA-------T----------GT--G------------T--------------------A------T------G
i Rhinopithecus_strykeri.ctg102                          C 0 I 4
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89046 16 -     96226 TA-------TTTA----TATAT--T------------T--------------------A------T------A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 5
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154402 16 -    313613 CA-------TGT---G-TAACT--T------------C--------------------A------T------A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 5
s Semnopithecus_entellus.k141_1672505                         2784 10 -     12572 GA-------T----------GT--G------------T--------------------A------T------G
i Semnopithecus_entellus.k141_1672505                    C 0 I 4
s Semnopithecus_hypoleucos.k141_1615806                      29636 10 +     39453 GA-------T----------GT--G------------T--------------------A------T------G
i Semnopithecus_hypoleucos.k141_1615806                  C 0 I 4
s Semnopithecus_johnii.k141_670120                           10144 10 +     27826 GA-------T----------GT--G------------T--------------------A------T------G
i Semnopithecus_johnii.k141_670120                       C 0 I 4
s Semnopithecus_priam.k141_638794                             9680 10 -     19483 GA-------T----------GT--G------------T--------------------A------T------G
i Semnopithecus_priam.k141_638794                        C 0 I 4
s Semnopithecus_schistaceus.k141_1572284                      2983 10 -     12762 GA-------T----------GT--G------------T--------------------A------T------G
i Semnopithecus_schistaceus.k141_1572284                 C 0 I 4
s Semnopithecus_vetulus.k141_910252                           2831 10 +     13763 GA-------T----------GT--G------------T--------------------A------T------G
i Semnopithecus_vetulus.k141_910252                      C 0 I 4
s Sigmodon_hispidus.SigHis_scaffold_42075                     1455  6 -     30804 ---------------------T--A------------T--------------------A------T------A
i Sigmodon_hispidus.SigHis_scaffold_42075                I 20 I 607
s Solenodon_paradoxus.SolPar_flattened_line_126               4944  7 +   1910179 --------------------TT--G------------T--------------------G------T------A
i Solenodon_paradoxus.SolPar_flattened_line_126          I 5 I 9
s Sorex_araneus.JH798187.1                                13652204 10 -  18376816 TA-------TTTA----TATC----------------------------------------------------
i Sorex_araneus.JH798187.1                               C 0 I 11
s Spermophilus_dauricus.KZ294078.1                         1955293  6 -   3870691 ---------------------t--g------------t--------------------t------t------a
i Spermophilus_dauricus.KZ294078.1                       I 36 I 10
s Spilogale_gracilis.SpiGra_flattened_line_13525             32219 16 +     97271 TA-------CCCA----TAAAG--T------------T--------------------A------T------A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 5
s Suricata_suricatta.SurSur_flattened_line_6629              19529 14 -    196729 TA-------CCT----CTAATT--T------------T--------------------A--------------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 3
s Sus_scrofa.CM000828.4                                    6812324 28 +  69701581 ta-------t----gtatatat--ttctatctatatac--------------------a------t------a
i Sus_scrofa.CM000828.4                                  C 0 I 5
s Tadarida_brasiliensis.TadBra_scaffold_25820                12028 16 +     41958 CA-------C--A-TG-TATAT--A------------G--------------------A------T------A
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73888 10 +    116680 TG-------C----------AA--A------------T--------------------T------T------G
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 9 I 9
s Theropithecus_gelada.CM009954.1                        186431305 10 + 186847797 ga-------t----------at--g------------t--------------------g------t------g
i Theropithecus_gelada.CM009954.1                        C 0 I 4
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106574  6 +    114563 ---------------------T--A------------T--------------------A------T------G
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 10 I 8
s Tolypeutes_matacus.TolMat_scaffold_228639                   7609 12 +      8208 TG-------T----------GA--A-C-------A--C--------------------G------T------A
i Tolypeutes_matacus.TolMat_scaffold_228639              I 9 I 8
s Tonatia_saurophila.TonSau_scaffold_294                     82420 16 +    610378 TA-------T--A-TG-TATAT--A------------T--------------------G------C------A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         13729 10 -     20410 GA-------T----------GT--G------------T--------------------A------T------G
i Trachypithecus_auratus.k141_722599                     C 0 I 4
s Trachypithecus_crepusculus.k141_582567                      2845 10 -     12674 GA-------T----------GT--G------------T--------------------A------T------G
i Trachypithecus_crepusculus.k141_582567                 C 0 I 4
s Trachypithecus_cristatus.k141_580354                       13837 10 +     19930 GA-------T----------GT--G------------T--------------------A------T------G
i Trachypithecus_cristatus.k141_580354                   C 0 I 4
s Trachypithecus_francoisi.k141_1412647                      10232 10 -     19997 GA-------T----------GT--G------------T--------------------A------T------G
i Trachypithecus_francoisi.k141_1412647                  C 0 I 4
s Trachypithecus_geei.k141_277701                            50377 10 -     60166 GA-------T----------GT--G------------T--------------------A------T------G
i Trachypithecus_geei.k141_277701                        C 0 I 4
s Trachypithecus_germaini.k141_912491                        17840 10 -     27529 GA-------T----------GT--G------------T--------------------A------T------G
i Trachypithecus_germaini.k141_912491                    C 0 I 4
s Trachypithecus_hatinhensis.k141_143409                     17790 10 -     18194 GA-------T----------GT--G------------T--------------------A------T------G
i Trachypithecus_hatinhensis.k141_143409                 C 0 I 4
s Trachypithecus_laotum.k141_907409                          11502 10 -     21137 GA-------T----------GT--G------------T--------------------A------T------G
i Trachypithecus_laotum.k141_907409                      C 0 I 4
s Trachypithecus_leucocephalus.k141_587342                   10202 10 -     10723 GA-------T----------GT--G------------T--------------------A------T------G
i Trachypithecus_leucocephalus.k141_587342               C 0 I 4
s Trachypithecus_melamera.k141_434728                         9379 10 +      9834 GA-------T----------GT--G------------T--------------------A------T------G
i Trachypithecus_melamera.k141_434728                    C 0 I 4
s Trachypithecus_obscurus.k141_190785                        27702 10 +     32220 GA-------T----------GT--G------------T--------------------A------T------G
i Trachypithecus_obscurus.k141_190785                    C 0 I 4
s Trachypithecus_phayrei.ctg124                            5941799 10 +   6242583 GA-------T----------GT--G------------T--------------------A------T------G
i Trachypithecus_phayrei.ctg124                          C 0 I 4
s Trachypithecus_pileatus.k141_2007326                       11050 10 +     20839 GA-------T----------GT--G------------T--------------------A------T------G
i Trachypithecus_pileatus.k141_2007326                   C 0 I 4
s Tragulus_javanicus.TraJav_scaffold_40725                     819  3 +     27266 ca-------t---------------------------------------------------------------
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 I 276
s Tupaia_chinensis.KB320699.1                              2157182 10 +   4065304 ca-------t----------ta--g------------t--------------------a------t------g
i Tupaia_chinensis.KB320699.1                            I 193 I 8
s Tursiops_truncatus.MRVK01000835.1                       15739106 27 +  33153633 caggtatatt----ttatatgt--g--------tatac--------------------t------t------A
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 5
s Uropsilus_gracilis.UroGra_scaffold_12083                   54497 16 -     77625 CA-------TTTA----TATAT--T------------C--------------------A------T------A
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 5
s Ursus_maritimus.KK499267.1                               4851602 16 -   5085361 TA-------CTTA----TAAAG--T------------T--------------------G------T------A
i Ursus_maritimus.KK499267.1                             C 0 I 5
s Vicugna_pacos.KN270157.1                                 5372985 16 -   5488506 ta-------t----gtatatat--a------------t--------------------a------t------a
i Vicugna_pacos.KN270157.1                               C 0 I 7
s Xerus_inauris.XerIna_scaffold_2302                          2300  5 +    224448 ---------------------t--g------------t--------------------t------t-------
i Xerus_inauris.XerIna_scaffold_2302                     I 11 I 9
s Zapus_hudsonius.ZapHud_scaffold_11398                      16047  6 +     63895 ---------------------C--C------------T--------------------A------T------G
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 16 I 10
e Lagothrix_lagothricha.k141_1005387                         15287  0 -     38430 C
e Ateles_paniscus.k141_457735                                21129  0 +     72325 C
e Ateles_marginatus.k141_803263                              13240  0 -     40414 C
e Ateles_geoffroyi_a.k141_833924                                8856  0 -     89868 C
e Ateles_chamek.k141_1806455                                 27084  0 -     30947 C
e Ateles_belzebuth.k141_445860                               44280  0 -     48001 C
e Ateles_geoffroyi_b.tarseq_1536                             21209484  0 -  21539123 C
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Alouatta_seniculus.k141_117119                             16471  0 +     50774 C
e Alouatta_puruensis.k141_362188                              2019  0 +      5663 C
e Alouatta_palliata.k141_2135620                              5287  0 +     47717 C
e Alouatta_nigerrima.k141_1929159                             1292  0 +     30492 C
e Alouatta_macconnelli.k141_918386                            2334  0 -      9457 C
e Alouatta_juara.k141_1302312                                 1197 57 +     27940 I
e Alouatta_discolor.k141_566626                              12779  0 +     28687 C
e Alouatta_caraya.k141_1701091                                2327  0 -     36483 C
e Alouatta_belzebul.k141_3560514                              9218  0 +     51355 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 12422 320 -     43706 T
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tarsius_wallacei.k141_254427                                1877  3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080  3 +     70052 I
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Otocyon_megalotis.JAEUCK010005147.1                       463984 325 -    559221 T
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9150892 182 -   9404916 T
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             35221  4 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1851541  4 +   8254450 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Lycaon_pictus.CM007581.1                                17956957 950 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838258  8 +   1526836 I
e Crocidura_indochinensis.CroInd_scaffold_37019               4143  0 -     19598 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Cephalopachus_bancanus.k141_1423433                         6085  3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Carlito_syrichta.NW_007259797.1                           156587  3 -    496798 I
e Canis_lupus_orion.HG994398.1                            18502019 950 +  63665305 I
e Canis_lupus_familiaris.chr16                            17960717 950 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9036246 952 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     1546 950 -     43241 I
e CanFam4.chr16                                           17800803 952 -  60362399 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       9544 4 +     62944 CATG
s Allenopithecus_nigroviridis.k141_3361533                   17441 4 -     52922 CATG
i Allenopithecus_nigroviridis.k141_3361533               I 4 C 0
s Allochrocebus_lhoesti.k141_4309873                         17369 4 -     28001 CATG
i Allochrocebus_lhoesti.k141_4309873                     I 4 C 0
s Allochrocebus_preussi.k141_1442296                          7869 4 -     18505 CATG
i Allochrocebus_preussi.k141_1442296                     I 4 C 0
s Allochrocebus_solatus.k141_166128                           8719 4 -     12518 CATG
i Allochrocebus_solatus.k141_166128                      I 4 C 0
s Cercocebus_atys.KQ010504.1                               4478398 4 +   4669795 catg
i Cercocebus_atys.KQ010504.1                             I 4 C 0
s Cercocebus_chrysogaster.k141_1540778                        2892 4 +     17872 CATG
i Cercocebus_chrysogaster.k141_1540778                   I 4 C 0
s Cercocebus_lunulatus.k141_3342297                           3487 4 -     14043 CATG
i Cercocebus_lunulatus.k141_3342297                      I 4 C 0
s Cercocebus_torquatus.k141_3057011                          11582 4 +     27781 CATG
i Cercocebus_torquatus.k141_3057011                      I 4 C 0
s Cercopithecus_ascanius.k141_1024104                        11729 4 -     20310 CATG
i Cercopithecus_ascanius.k141_1024104                    I 4 C 0
s Cercopithecus_cephus.k141_1078548                          14709 4 +     29689 CATG
i Cercopithecus_cephus.k141_1078548                      I 4 C 0
s Cercopithecus_diana.k141_1150327                            9465 4 -     20078 CATG
i Cercopithecus_diana.k141_1150327                       I 4 C 0
s Cercopithecus_hamlyni.k141_187466                          17387 4 -     27936 CATG
i Cercopithecus_hamlyni.k141_187466                      I 4 C 0
s Cercopithecus_lowei.k141_1854285                            6249 4 -     17152 CATG
i Cercopithecus_lowei.k141_1854285                       I 4 C 0
s Cercopithecus_albogularis.ctg5                                38825979 4 +  39242232 CATG
i Cercopithecus_albogularis.ctg5                               I 4 C 0
s Cercopithecus_mona.ctg39                                21225483 4 -  21565898 CATG
i Cercopithecus_mona.ctg39                               I 4 C 0
s Cercopithecus_neglectus.k141_2526306                       42606 3 -     53127 CAT-
i Cercopithecus_neglectus.k141_2526306                   I 4 C 0
s Cercopithecus_nictitans.k141_1119862                        2852 4 +     13442 CATG
i Cercopithecus_nictitans.k141_1119862                   I 4 C 0
s Cercopithecus_petaurista.k141_807961                       17398 4 -     27947 CATG
i Cercopithecus_petaurista.k141_807961                   I 4 C 0
s Cercopithecus_pogonias.k141_822820                         17378 4 +     17596 CATG
i Cercopithecus_pogonias.k141_822820                     I 4 C 0
s Cercopithecus_roloway.k141_2581234                          3434 4 +     14005 CATG
i Cercopithecus_roloway.k141_2581234                     I 4 C 0
s Chlorocebus_aethiops.ctg25                              18431302 4 -  18827391 CATG
i Chlorocebus_aethiops.ctg25                             I 4 C 0
s Chlorocebus_pygerythrus.k141_1025673                       17808 4 -     50209 CATG
i Chlorocebus_pygerythrus.k141_1025673                   I 4 C 0
s Chlorocebus_sabaeus.CM001947.1                         135424807 4 + 135778131 catg
i Chlorocebus_sabaeus.CM001947.1                         I 4 C 0
s Colobus_angolensis.KN981557.1                            1913310 4 +   2368649 catg
i Colobus_angolensis.KN981557.1                          I 4 C 0
s Colobus_guereza.LG01                                   199951559 4 + 200372422 CCTG
i Colobus_guereza.LG01                                   I 4 C 0
s Colobus_polykomos.k141_906115                              39835 4 +     84244 CATG
i Colobus_polykomos.k141_906115                          I 4 C 0
s Erythrocebus_patas.Contig38                             21207975 4 -  21539334 CATG
i Erythrocebus_patas.Contig38                            I 4 C 0
s Gorilla_beringei.k141_3596273                              18785 4 -     32273 CATG
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186340922 4 + 186649187 catg
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hoolock_leuconedys.ctg274                                    437586 4 +    630532 TATA
i Hoolock_leuconedys.ctg274                                 C 0 I 1
s Lophocebus_aterrimus.ctg367                              1439940 4 +   1826925 CATG
i Lophocebus_aterrimus.ctg367                            I 4 C 0
s Macaca_arctoides.k141_2326796                               9749 4 +     40492 CATG
i Macaca_arctoides.k141_2326796                          I 4 C 0
s Macaca_assamensis.Contig5                               59679003 4 +  60120075 CATG
i Macaca_assamensis.Contig5                              I 4 C 0
s Macaca_cyclopis.k119_18836                                 15521 4 -     26193 CATG
i Macaca_cyclopis.k119_18836                             I 4 C 0
s Macaca_fascicularis.k141_814140                            83297 4 -    114318 CATG
i Macaca_fascicularis.k141_814140                        I 4 C 0
s Macaca_fuscata.k119_255327                                  8988 4 -     23192 CATG
i Macaca_fuscata.k119_255327                             I 4 C 0
s Macaca_leonina.k141_3550399                                18452 4 -     29190 CATG
i Macaca_leonina.k141_3550399                            I 4 C 0
s Macaca_maura.k141_2733130                                  27030 4 +     37952 CATG
i Macaca_maura.k141_2733130                              I 4 C 0
s Macaca_mulatta.NC_041758.1                             186842109 4 + 187317192 catg
i Macaca_mulatta.NC_041758.1                             I 4 C 0
s Macaca_nemestrina.KQ007038.1                            25460685 4 -  25927173 catg
i Macaca_nemestrina.KQ007038.1                           I 4 C 0
s Macaca_nigra.k141_1655396                                  82886 4 +     89720 CATG
i Macaca_nigra.k141_1655396                              I 4 C 0
s Macaca_radiata.k141_3680011                                 9879 4 +     20474 CATG
i Macaca_radiata.k141_3680011                            I 4 C 0
s Macaca_siberu.k141_635500                                   9676 4 -     14993 CATG
i Macaca_siberu.k141_635500                              I 4 C 0
s Macaca_silenus.Contig273                                  332538 4 -    668171 CATG
i Macaca_silenus.Contig273                               I 4 C 0
s Macaca_thibetana.k99_256239                                 7988 4 -     24072 CATG
i Macaca_thibetana.k99_256239                            I 4 C 0
s Macaca_tonkeana.k141_1498238                               28619 4 -     45290 CATG
i Macaca_tonkeana.k141_1498238                           I 4 C 0
s Mandrillus_leucophaeus.scaffold280                      23940211 4 -  24302211 CATG
i Mandrillus_leucophaeus.scaffold280                     I 4 C 0
s Mandrillus_sphinx.Contig270                               354323 4 +    752769 CATG
i Mandrillus_sphinx.Contig270                            I 4 C 0
s Miopithecus_ogouensis.k141_534055                          11886 4 -     28506 CATG
i Miopithecus_ogouensis.k141_534055                      I 4 C 0
s Nasalis_larvatus.k141_413338                               17940 4 +     21681 CATG
i Nasalis_larvatus.k141_413338                           I 4 C 0
s Pan_paniscus.KQ411613.1                                    46887 4 +     80009 catg
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189145763 4 + 189151597 catg
i Pan_troglodytes.CM009242.2                             C 0 I 8
s Papio_anubis.CM001495.2                                183446013 4 + 183742232 catg
i Papio_anubis.CM001495.2                                I 4 C 0
s Papio_cynocephalus.k141_4307930                             9663 4 +     20448 CATG
i Papio_cynocephalus.k141_4307930                        I 4 C 0
s Papio_hamadryas.Contig39                                20566471 4 +  20919399 CATG
i Papio_hamadryas.Contig39                               I 4 C 0
s Papio_kindae.k141_1936966                                   8403 4 +     41871 CATG
i Papio_kindae.k141_1936966                              I 4 C 0
s Papio_papio.k141_802527                                    11696 4 +     27711 CATG
i Papio_papio.k141_802527                                I 4 C 0
s Papio_ursinus.k141_5274964                                  2695 4 -     11374 CATG
i Papio_ursinus.k141_5274964                             I 4 C 0
s Piliocolobus_badius.k141_1142974                            1014 4 +     68526 CATG
i Piliocolobus_badius.k141_1142974                       I 4 C 0
s Piliocolobus_gordonorum.k141_381342                        41160 4 +     89929 CATG
i Piliocolobus_gordonorum.k141_381342                    I 4 C 0
s Piliocolobus_kirkii.k141_448987                            42574 4 +     51399 CATG
i Piliocolobus_kirkii.k141_448987                        I 4 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14298811 4 -  14605196 CATG
i Piliocolobus_tephrosceles.PDMG02000141.1               I 4 C 0
s Pongo_abelii.CM009266.2                                189133906 4 + 189387572 TGTG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9573515 4 +   9816681 TGTG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76124 4 -     81375 CATG
i Presbytis_comata.k141_677006                           I 4 C 0
s Presbytis_mitrata.k141_1087752                              7941 4 +     19060 CATG
i Presbytis_mitrata.k141_1087752                         I 4 C 0
s Pygathrix_cinerea.k141_1153803                             17925 4 -     91421 CATG
i Pygathrix_cinerea.k141_1153803                         I 4 C 0
s Pygathrix_nigripes_b.ctg100                                 7612049 4 +   7812017 CATG
i Pygathrix_nigripes_b.ctg100                               I 4 C 0
s Pygathrix_nigripes_a.k141_215492                             17956 4 -     72585 CATG
i Pygathrix_nigripes_a.k141_215492                         I 4 C 0
s Rhinopithecus_bieti.k119_217274                             9628 4 -     11128 CATG
i Rhinopithecus_bieti.k119_217274                        I 4 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91238992 4 - 195417433 catg
i Rhinopithecus_roxellana.NC_044550.1                    I 4 C 0
s Rhinopithecus_strykeri.ctg102                            7674639 4 +   7961872 CATG
i Rhinopithecus_strykeri.ctg102                          I 4 C 0
s Semnopithecus_entellus.k141_1672505                         2798 4 -     12572 CATG
i Semnopithecus_entellus.k141_1672505                    I 4 C 0
s Semnopithecus_hypoleucos.k141_1615806                      29650 4 +     39453 CATG
i Semnopithecus_hypoleucos.k141_1615806                  I 4 C 0
s Semnopithecus_johnii.k141_670120                           10158 4 +     27826 CATG
i Semnopithecus_johnii.k141_670120                       I 4 C 0
s Semnopithecus_priam.k141_638794                             9694 4 -     19483 CATG
i Semnopithecus_priam.k141_638794                        I 4 C 0
s Semnopithecus_schistaceus.k141_1572284                      2997 4 -     12762 CATG
i Semnopithecus_schistaceus.k141_1572284                 I 4 C 0
s Semnopithecus_vetulus.k141_910252                           2845 4 +     13763 CATG
i Semnopithecus_vetulus.k141_910252                      I 4 C 0
s Theropithecus_gelada.CM009954.1                        186431319 4 + 186847797 catg
i Theropithecus_gelada.CM009954.1                        I 4 C 0
s Trachypithecus_auratus.k141_722599                         13743 4 -     20410 CATG
i Trachypithecus_auratus.k141_722599                     I 4 C 0
s Trachypithecus_crepusculus.k141_582567                      2859 4 -     12674 CATG
i Trachypithecus_crepusculus.k141_582567                 I 4 C 0
s Trachypithecus_cristatus.k141_580354                       13851 4 +     19930 CATG
i Trachypithecus_cristatus.k141_580354                   I 4 C 0
s Trachypithecus_francoisi.k141_1412647                      10246 4 -     19997 CATG
i Trachypithecus_francoisi.k141_1412647                  I 4 C 0
s Trachypithecus_geei.k141_277701                            50391 4 -     60166 CATG
i Trachypithecus_geei.k141_277701                        I 4 C 0
s Trachypithecus_germaini.k141_912491                        17854 4 -     27529 CATG
i Trachypithecus_germaini.k141_912491                    I 4 C 0
s Trachypithecus_hatinhensis.k141_143409                     17804 4 -     18194 CATG
i Trachypithecus_hatinhensis.k141_143409                 I 4 C 0
s Trachypithecus_laotum.k141_907409                          11516 4 -     21137 CATG
i Trachypithecus_laotum.k141_907409                      I 4 C 0
s Trachypithecus_leucocephalus.k141_587342                   10216 4 -     10723 CATG
i Trachypithecus_leucocephalus.k141_587342               I 4 C 0
s Trachypithecus_melamera.k141_434728                         9393 4 +      9834 CATG
i Trachypithecus_melamera.k141_434728                    I 4 C 0
s Trachypithecus_obscurus.k141_190785                        27716 4 +     32220 CATG
i Trachypithecus_obscurus.k141_190785                    I 4 C 0
s Trachypithecus_phayrei.ctg124                            5941813 4 +   6242583 CATG
i Trachypithecus_phayrei.ctg124                          I 4 C 0
s Trachypithecus_pileatus.k141_2007326                       11064 4 +     20839 CATG
i Trachypithecus_pileatus.k141_2007326                   I 4 C 0
e Cheracebus_torquatus.k141_1170026                          62565 5 +     76511 I
e Cheracebus_regulus.k141_471822                            158090 5 -    216457 I
e Cheracebus_lugens.k141_1393925                               523 5 +     17877 I
e Cheracebus_lucifer.k141_49986                                647 5 -     17098 I
e Plecturocebus_moloch.k141_1031110                          22373 5 -     89403 I
e Plecturocebus_miltoni.k141_349282                          25001 5 +     90634 I
e Plecturocebus_hoffmannsi.k141_3303950                      29528 5 +     67232 I
e Plecturocebus_grovesi.k141_2013005                         29331 5 +     60166 I
e Plecturocebus_dubius.k141_1058799                          22372 5 -     87928 I
e Plecturocebus_cupreus.k141_2351393                          8591 5 +     39403 I
e Plecturocebus_cinerascens.k141_1164729                     22920 5 +     88961 I
e Plecturocebus_caligatus.k141_1382851                       22093 5 +     87950 I
e Plecturocebus_brunneus.k141_1495506                        17829 5 +     34906 I
e Plecturocebus_bernhardi.k141_2549090                        8663 5 -     39866 I
e Pithecia_vanzolinii.k141_1697688                            4400 5 -     23490 I
e Pithecia_pithecia.tarseq_165                             3940985 5 +   4542175 I
e Pithecia_pissinattii.k141_1824269                           4436 5 +     26198 I
e Pithecia_mittermeieri.k141_446740                          29440 5 +     52772 I
e Pithecia_hirsuta.k141_305604                                4414 5 +     29694 I
e Pithecia_chrysocephala.k141_839575                           567 5 +     23417 I
e Pithecia_albicans.k141_1476471                              4422 5 +     26961 I
e Lagothrix_lagothricha.k141_1005387                         15287 0 -     38430 C
e Chiropotes_sagulatus.k141_1421488                          30964 5 -     50570 I
e Chiropotes_israelita.k141_747660                           99156 5 +    146308 I
e Cacajao_melanocephalus.k141_619699                         54820 5 -    119600 I
e Cacajao_hosomi.k141_81245                                  30719 5 -     95584 I
e Cacajao_calvus.k141_5142                                   61539 5 +     81800 I
e Cacajao_ayresi.k141_552049                                102034 5 -    122966 I
e Ateles_paniscus.k141_457735                                21129 0 +     72325 C
e Ateles_marginatus.k141_803263                              13240 0 -     40414 C
e Ateles_geoffroyi_a.k141_833924                                8856 0 -     89868 C
e Ateles_chamek.k141_1806455                                 27084 0 -     30947 C
e Ateles_belzebuth.k141_445860                               44280 0 -     48001 C
e Ateles_geoffroyi_b.tarseq_1536                             21209484 0 -  21539123 C
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202 0 +      8798 C
e Galago_senegalensis.k141_631886                             7400 0 +     11339 C
e Galago_moholi.ctg2040                                     429710 0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964 2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Alouatta_seniculus.k141_117119                             16471 0 +     50774 C
e Alouatta_puruensis.k141_362188                              2019 0 +      5663 C
e Alouatta_palliata.k141_2135620                              5287 0 +     47717 C
e Alouatta_nigerrima.k141_1929159                             1292 0 +     30492 C
e Alouatta_macconnelli.k141_918386                            2334 0 -      9457 C
e Alouatta_juara.k141_1302312                                 1197 57 +     27940 I
e Alouatta_discolor.k141_566626                              12779 0 +     28687 C
e Alouatta_caraya.k141_1701091                                2327 0 -     36483 C
e Alouatta_belzebul.k141_3560514                              9218 0 +     51355 C
e Mus_pahari.LT608297.1                                   31356197 930 -  89631738 I
e Mus_spretus.CM004101.1                                  90753584 1301 - 130317789 I
e Mus_musculus.chr8                                       87651523 871 - 129401213 I
e Mus_caroli.LT608237.1                                   84362538 357 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445 0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734 0 -     33856 C
e Perodicticus_potto.k141_1186926                              597 0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219 0 -      3244 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      16053 10 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Xerus_inauris.XerIna_scaffold_2302                          2305 9 +    224448 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 12422 320 -     43706 T
e Vicugna_pacos.KN270157.1                                 5373001 7 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851618 5 -   5085361 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   54513 5 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15739133 5 +  33153633 I
e Tupaia_chinensis.KB320699.1                              2157192 8 +   4065304 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_40725                     822 276 +     27266 I
e Tonatia_saurophila.TonSau_scaffold_294                     82436 0 +    610378 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   7621 8 +      8208 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              106580 8 +    114563 I
e Tarsius_wallacei.k141_254427                                1877 3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080 3 +     70052 I
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73898 9 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                12044 0 +     41958 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6812352 5 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629              19543 3 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             32235 5 +     97271 I
e Spermophilus_dauricus.KZ294078.1                         1955299 10 -   3870691 I
e Sorex_araneus.JH798187.1                                13652214 11 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4951 9 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_42075                     1461 607 -     30804 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    154418 5 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                89062 5 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        368219 6 -   3329780 I
e Rattus_norvegicus.chr16                                 53571770 803 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  6486 5 +     55207 I
e Puma_concolor.QAVW01001104.1                            20275521 5 -  38429054 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Pteropus_alecto.KB030862.1                              22978014 7 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         41761 5 +     42204 I
e Pteronotus_parnellii.KE909381.1                            16375 0 -     21811 C
e Psammomys_obesus.NESX01036370.1                            11566 591 -     21651 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             2992 11 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9933 5 +     63832 I
e Petromus_typicus.PetTyp_scaffold_42190                     29288 8 -     29689 I
e Peromyscus_maniculatus.KI615324.1                       18195940 605 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13856 5 -     78924 I
e Pantholops_hodgsonii.KE114653.1                          1265905 5 -   2937107 I
e Panthera_tigris.KE722367.1                               4722451 5 -   8748460 I
e Panthera_pardus.KV860321.1                                265571 5 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  152362 5 +    230217 I
e Ovis_canadensis.OviCan_scaffold_2572                      175001 5 -    191736 I
e Ovis_aries.CM001607.2                                   17587016 5 +  44047080 I
e Otocyon_megalotis.JAEUCK010005147.1                       463984 325 -    559221 T
e Oryctolagus_cuniculus.CM000791.1                        67148862 12 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Orcinus_orca.KB316932.1                                  2782888 5 -  10937097 I
e Onychomys_torridus.OnyTor_scaffold_2986                    81364 552 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   26325 578 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77744 1 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              507900 5 -   2017862 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Ochotona_princeps.JH802162.1                             1365408 8 +   3988456 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869 0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414 0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947 0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9150892 182 -   9404916 T
e Noctilio_leporinus.NocLep_scaffold_251                    759095 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5866979 5 +   7148211 I
e Neomonachus_schauinslandi.NINY01007730.1                20308758 5 +  31847680 I
e Nannospalax_galili.KL204047.1                            2035678 1022 -   3037898 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190513 9 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_281845                        1211 12 +      1835 I
e Myotis_lucifugus.GL429869.1                              3905059 12 -   4330536 I
e Myotis_davidii.KB100139.1                                1588961 10 -   6019432 I
e Myotis_brandtii.KE162005.1                                279962 1755 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     72335 7 -     80779 I
e Mustela_putorius.JH418006.1                               302954 5 -  14710649 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           8065 12 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398 7 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1908 5 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 142887 0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    28010 5 -    437263 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7165 5 -      8324 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             35221 4 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1851541 4 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11261674 590 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                17095 0 -     19307 C
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    4501 5 +     10310 I
e Mesocricetus_auratus.KB708134.1                         12183376 611 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 33920 596 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365             11559 5 +     13704 I
e Megaderma_lyra.MegLyr_scaffold_4542                        14563 6 -    207569 I
e Marmota_marmota.CZRN01000018.1                          33104440 10 -  40650429 I
e Manis_pentadactyla.KN006162.1                              51496 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              19478 0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 91873 5 +     94391 I
e Lycaon_pictus.CM007581.1                                17956957 950 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268895 5 -    662738 I
e Lepus_americanus.LepAme_scaffold_107385                     7961 12 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044298 5 +   3914936 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Lasiurus_borealis.LasBor_scaffold_50988                    16384 22 +     29960 I
e Kogia_breviceps.KogBre_flattened_line_192630                3206 5 -      3359 I
e Jaculus_jaculus.JH725527.1                               8278316 10 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_48101               23831 5 +     23964 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7522153 10 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      84260 8 +    135385 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  46237 5 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_101188                311 6 +      9903 I
e Hipposideros_armiger.JXIK01000431.1                       111741 6 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20663375 8 +  22651954 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 19043 5 +     36099 I
e Helogale_parvula.HelPar_flattened_line_2585               243543 3 +    327341 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Graphiurus_murinus.GraMur_scaffold_10447                   33801 14 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            32124 16 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609833 1 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_108840               2664 8 -      9135 I
e Galagoides_demidoff.k141_1711393                            4689 0 +     41679 C
e Fukomys_damarensis.KN121974.1                             851592 8 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                 10754 5 -     36744 I
e Felis_catus_fca126.CM031415.1                           20197000 5 + 205367284 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Eubalaena_japonica.EubJap_flattened_line_31514             26245 5 -     44125 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           12292 5 +    133382 I
e Erinaceus_europaeus.JH835339.1                           3329429 5 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2146969 11 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16330847 5 -  41312741 I
e Ellobius_talpinus.LOJH01081419.1                            1597 591 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          21691 591 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311866 5 +    607251 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    37570 6 +     67921 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8631343 0 +  20541912 C
e Delphinapterus_leucas.KZ290073.1                        16812627 5 +  35494412 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64747 8 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  37023 8 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838258 8 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             29700 5 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_37019               4143 0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11668671 0 + 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_18520                 51230 536 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           1711 6 +     23735 I
e Condylura_cristata.JH655891.1                           17549260 10 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1254081 6 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1728 8 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Cephalopachus_bancanus.k141_1423433                         6085 3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     94782 5 +    217609 I
e Castor_canadensis.CasCan_scaffold_2074                    138491 10 +    179628 I
e Carollia_perspicillata.CarPer_scaffold_92756                6333 0 -     11696 C
e Carlito_syrichta.NW_007259797.1                           156587 3 -    496798 I
e Capromys_pilorides.CapPil_scaffold_65020                    2152 8 -     12242 I
e Capra_hircus.CM004588.1                                 18061550 5 -  44709034 I
e Capra_aegagrus.CM003241.1                               18830830 5 +  46296322 I
e Canis_lupus_orion.HG994398.1                            18502019 950 +  63665305 I
e Canis_lupus_familiaris.chr16                            17960717 950 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9036246 952 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     1546 950 -     43241 I
e CanFam4.chr16                                           17800803 952 -  60362399 I
e Camelus_ferus.KB017975.1                                  404257 7 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2335958 7 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10003482 7 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2820212 5 +   4408762 I
e Bos_taurus.CM000203.6                                   18084536 5 +  45695690 I
e Bos_mutus.JH880303.1                                     1126458 5 -   1948126 I
e Bos_indicus.CM003047.1                                  20273898 5 +  48749331 I
e Bison_bison.KN261452.1                                    200713 5 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    27622 5 +     34529 I
e Balaenoptera_bonaerensis.DF707048.1                         3445 5 -     18090 I
e Balaenoptera_acutorostrata.KI537508.1                   15192980 5 +  23207421 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  5993 0 +     43469 C
e Arctocebus_calabarensis.k141_1648548                         538 0 +      5281 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      13842 12 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             99195 5 -    100397 I
e Anoura_caudifer.AnoCau_scaffold_1412                      186595 0 +    412891 C
e Ammotragus_lervia.NIVO01071767.1                          676716 5 -   2318259 I
e Allactaga_bullata.AllBul_scaffold_9566                     75614 10 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             80890 5 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9511816 5 -  29979442 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     71955 546 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           828514 5 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       9548  9 +     62944 A-------------T---T---ATTG-TT
s Acinonyx_jubatus.LLWD01001279.1                           828519 13 -   1699592 c------taacatac---a---gtt----
i Acinonyx_jubatus.LLWD01001279.1                        I 5 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     72501  8 +     87051 A-------------C---T---TAT--TT
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 546 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511821 18 -  29979442 A-AACAAACTCaagg---g---aag----
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 5 C 0
s Ailurus_fulgens.LNAC01001112.1                             80895 18 -    347723 A-AACAAATTCAAGC---C---aaa----
i Ailurus_fulgens.LNAC01001112.1                         I 5 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     75624  8 -     89534 A-------------T---T---TAT--TT
i Allactaga_bullata.AllBul_scaffold_9566                 I 10 C 0
s Allenopithecus_nigroviridis.k141_3361533                   17445  6 -     52922 A-------------T---T---A----TT
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         17373  6 -     28001 A-------------T---T---A----TT
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          7873  6 -     18505 G-------------T---T---A----TT
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           8723  6 -     12518 A-------------T---T---A----TT
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          676721  6 -   2318259 a-------------t---g---agt----
i Ammotragus_lervia.NIVO01071767.1                       I 5 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      186595  6 +    412891 G-------------T---T---ATT----
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 2
s Antilocapra_americana.AntAmePen_scaffold_12469             99200  6 -    100397 A-------------A---G---AGt----
i Antilocapra_americana.AntAmePen_scaffold_12469         I 5 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13854  4 +     20879 -----------------------TT--TT
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 12 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  5993  6 +     43469 A-------------G---C---ATT----
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 5
s Balaenoptera_acutorostrata.KI537508.1                   15192985  6 +  23207421 A-------------T---T---ATT----
i Balaenoptera_acutorostrata.KI537508.1                  I 5 C 0
s Balaenoptera_bonaerensis.DF707048.1                         3450  6 -     18090 A-------------T---T---ATT----
i Balaenoptera_bonaerensis.DF707048.1                    I 5 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    27627  6 +     34529 a-------------t---g---agt----
i Beatragus_hunteri.BeaHun_scaffold_50177                I 5 C 0
s Bison_bison.KN261452.1                                    200718  6 -    288883 a-------------t---g---agt----
i Bison_bison.KN261452.1                                 I 5 C 0
s Bos_indicus.CM003047.1                                  20273903  6 +  48749331 a-------------t---g---agt----
i Bos_indicus.CM003047.1                                 I 5 C 0
s Bos_mutus.JH880303.1                                     1126463  6 -   1948126 a-------------t---g---agt----
i Bos_mutus.JH880303.1                                   I 5 C 0
s Bos_taurus.CM000203.6                                   18084541  6 +  45695690 a-------------t---g---agt----
i Bos_taurus.CM000203.6                                  I 5 C 0
s Bubalus_bubalis.KI419123.1                               2820217  6 +   4408762 a-------------t---g---agt----
i Bubalus_bubalis.KI419123.1                             I 5 C 0
s Cacajao_ayresi.k141_552049                                102039  9 -    122966 A-------------T---T---ATTG-TT
i Cacajao_ayresi.k141_552049                             I 5 C 0
s Cacajao_calvus.k141_5142                                   61544  9 +     81800 A-------------T---T---ATTG-TT
i Cacajao_calvus.k141_5142                               I 5 C 0
s Cacajao_hosomi.k141_81245                                  30724  9 -     95584 A-------------T---T---ATTG-TT
i Cacajao_hosomi.k141_81245                              I 5 C 0
s Cacajao_melanocephalus.k141_619699                         54825  9 -    119600 A-------------T---T---ATTG-TT
i Cacajao_melanocephalus.k141_619699                     I 5 C 0
s Camelus_bactrianus.KN276810.1                           10003489  6 -  17673402 a-------------t---t---att----
i Camelus_bactrianus.KN276810.1                          I 7 C 0
s Camelus_dromedarius.KN272107.1                           2335965  6 -   7040546 a-------------t---t---att----
i Camelus_dromedarius.KN272107.1                         I 7 C 0
s Camelus_ferus.KB017975.1                                  404264  6 -   1652518 a-------------t---t---att----
i Camelus_ferus.KB017975.1                               I 7 C 0
s Capra_aegagrus.CM003241.1                               18830835  6 +  46296322 a-------------t---g---agt----
i Capra_aegagrus.CM003241.1                              I 5 C 0
s Capra_hircus.CM004588.1                                 18061555  6 -  44709034 a-------------t---g---agt----
i Capra_hircus.CM004588.1                                I 5 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    2160  5 -     12242 ----------------------AGT--AT
i Capromys_pilorides.CapPil_scaffold_65020               I 8 I 3
s Carollia_perspicillata.CarPer_scaffold_92756                6333  6 -     11696 A-------------T---T---GTT----
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 5
s Castor_canadensis.CasCan_scaffold_2074                    138501  8 +    179628 A-------------T---T---ATT--TT
i Castor_canadensis.CasCan_scaffold_2074                 I 10 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     94787  6 +    217609 A-------------T---T---ATT----
i Catagonus_wagneri.CatWag_scaffold_2839                 I 5 C 0
s Cercocebus_atys.KQ010504.1                               4478402  6 +   4669795 a-------------t---t---a----tt
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        2896  6 +     17872 A-------------T---T---A----TT
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           3491  6 -     14043 A-------------T---T---A----TT
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          11586  6 +     27781 A-------------T---T---A----TT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        11733  6 -     20310 A-------------T---T---A----TT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          14713  6 +     29689 A-------------T---T---A----TT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            9469  6 -     20078 A-------------T---T---A----TT
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          17391  6 -     27936 A-------------T---T---A----TT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            6253  6 -     17152 A-------------T---T---A----TT
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38825983  6 +  39242232 A-------------T---T---A----TT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21225487  6 -  21565898 A-------------T---T---A----TT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       42609  4 -     53127 ------------------T---A----TT
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        2856  6 +     13442 A-------------T---T---A----TT
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       17402  6 -     27947 A-------------T---T---A----TT
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_822820                         17382  6 +     17596 A-------------T---T---A----TT
i Cercopithecus_pogonias.k141_822820                     C 0 C 0
s Cercopithecus_roloway.k141_2581234                          3438  6 +     14005 A-------------T---T---A----TT
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1736 11 -      8501 C-------------TTTGT---ATT--CT
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       I 8 C 0
s Cheracebus_lucifer.k141_49986                                652 12 -     17098 A-------------TGATT---ATTG-TT
i Cheracebus_lucifer.k141_49986                          I 5 C 0
s Cheracebus_lugens.k141_1393925                               528 12 +     17877 A-------------TGATT---ATTG-TT
i Cheracebus_lugens.k141_1393925                         I 5 C 0
s Cheracebus_regulus.k141_471822                            158095 12 -    216457 A-------------TGATT---ATTG-TT
i Cheracebus_regulus.k141_471822                         I 5 C 0
s Cheracebus_torquatus.k141_1170026                          62570 12 +     76511 A-------------TGATT---ATTG-TT
i Cheracebus_torquatus.k141_1170026                      I 5 C 0
s Chinchilla_lanigera.JH722012.1                           1254087  5 +   2543920 ----------------------atc--at
i Chinchilla_lanigera.JH722012.1                         I 6 C 0
s Chiropotes_israelita.k141_747660                           99161  9 +    146308 A-------------T---T---ATTG-TT
i Chiropotes_israelita.k141_747660                       I 5 C 0
s Chiropotes_sagulatus.k141_1421488                          30969  9 -     50570 A-------------T---T---ATTG-TT
i Chiropotes_sagulatus.k141_1421488                      I 5 C 0
s Chlorocebus_aethiops.ctg25                              18431306  6 -  18827391 A-------------T---T---A----TT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       17812  6 -     50209 A-------------T---T---A----TT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135424811  6 + 135778131 a-------------t---t---a----tt
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1913314  6 +   2368649 a-------------t---t---A----TT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199951563  6 + 200372422 A-------------T---T---A----TT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              39839  6 +     84244 A-------------T---T---A----TT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549270  6 -  53390261 A-------------T---C---ATT----
i Condylura_cristata.JH655891.1                          I 10 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1717  6 +     23735 A-------------T---T---ATT----
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      I 6 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 51766  8 +     63868 A-------------T---T---GAT--TT
i Cricetomys_gambianus.CriGam_scaffold_18520             I 536 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29705 11 -     87169 A-TACA-------GT---T---ATT----
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 5 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    838266  8 +   1526836 A-------------C---T---ATT--TT
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 8 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37031  5 +     51376 ----------------------ATT--AT
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 8 I 3
s Dasypus_novemcinctus.JH564415.1                            64755 11 +   2246927 C-------------TCTGT---ATT--CT
i Dasypus_novemcinctus.JH564415.1                        I 8 C 0
s Delphinapterus_leucas.KZ290073.1                        16812632  6 +  35494412 A-------------T---T---ATT----
i Delphinapterus_leucas.KZ290073.1                       I 5 C 0
s Desmodus_rotundus.KZ672289.1                             8631343  9 +  20541912 g-------------tCCGT---ATT----
i Desmodus_rotundus.KZ672289.1                           C 0 I 2
s Dinomys_branickii.DinBra_scaffold_21862                    37576  5 +     67921 ----------------------ATT--AT
i Dinomys_branickii.DinBra_scaffold_21862                I 6 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       311871  6 +    607251 a-------------t---g---agt----
i Elaphurus_davidianus.JRFZ01104969.1                    I 5 C 0
s Ellobius_lutescens.LOEQ01008920.1                          22282  8 -    110024 A-------------T---T---GAT--TT
i Ellobius_lutescens.LOEQ01008920.1                      I 591 C 0
s Ellobius_talpinus.LOJH01081419.1                            2188  8 +      8657 A-------------T---T---GAT--TT
i Ellobius_talpinus.LOJH01081419.1                       I 591 C 0
s Enhydra_lutris.KZ291758.1                               16330852 18 -  41312741 A-AACAAACTCAAGC---C---AAG----
i Enhydra_lutris.KZ291758.1                              I 5 C 0
s Erinaceus_europaeus.JH835339.1                           3329434  7 -   7059049 A-A-----------C---T---ACT----
i Erinaceus_europaeus.JH835339.1                         I 5 C 0
s Erythrocebus_patas.Contig38                             21207979  6 -  21539334 A-------------T---T---A----TT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12297  6 +    133382 A-------------T---T---ATT----
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 5 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             26250  6 -     44125 A-------------T---T---ATT----
i Eubalaena_japonica.EubJap_flattened_line_31514         I 5 C 0
s Felis_catus.CM001381.2                                  20238162 13 + 206538554 c------taacatac---a---gtt----
i Felis_catus.CM001381.2                                 I 5 C 0
s Felis_catus_fca126.CM031415.1                           20197005 13 + 205367284 CTAACA---T---AC---A---GTT----
i Felis_catus_fca126.CM031415.1                          I 5 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 10759 13 -     36744 CTAACA---T---AC---A---GTT----
i Felis_nigripes.FelNig_flattened_line_20823             I 5 C 0
s Fukomys_damarensis.KN121974.1                             851600  4 +   3816255 A-------------T---T---A------
i Fukomys_damarensis.KN121974.1                          I 8 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               2672  9 -      9135 A-------------T---T---ATT-GGT
i Galeopterus_variegatus.GalVar_scaffold_108840          I 8 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     609834  6 -    660261 a-------------t---g---agt----
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 1 C 0
s Glis_glis.GliGli_scaffold_19807                            32140  8 +     49224 A-------------T---T---ATT--TT
i Glis_glis.GliGli_scaffold_19807                        I 16 C 0
s Gorilla_beringei.k141_3596273                              18789  9 -     32273 A-------------T---T---ATTG-TT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186340926  9 + 186649187 a-------------t---T---ATTG-TT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33815  8 +     78134 A-------------T---T---ATT--TT
i Graphiurus_murinus.GraMur_scaffold_10447               I 14 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243546  4 +    327341 --------------C---T----TT----
i Helogale_parvula.HelPar_flattened_line_2585            I 3 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 19048  6 +     36099 a-------------t---g---agt----
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 5 C 0
s Heterocephalus_glaber.JH602082.1                        20663383  4 +  22651954 A-------------T---T---A------
i Heterocephalus_glaber.JH602082.1                       I 8 C 0
s Hipposideros_armiger.JXIK01000431.1                       111747  6 +   1711038 a-------------t---t---att----
i Hipposideros_armiger.JXIK01000431.1                    I 6 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188                317  6 +      9903 A-------------T---T---ATC----
i Hipposideros_galeritus.HipGal_scaffold_101188          I 6 C 0
s Hoolock_leuconedys.ctg274                                    437591  9 +    630532 A-------------T---G---ATTG-TT
i Hoolock_leuconedys.ctg274                                 I 1 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46242 14 +     55795 A-TA-AAA-T--AGC---T---ATT----
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 5 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84268  8 +    135385 A-------------T---T---ATT--TT
i Hystrix_cristata.HysCri_scaffold_5660                  I 8 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7522163  8 -   7955117 A-------------T---A---ATT--TC
i Ictidomys_tridecemlineatus.JH393364.1                  I 10 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               23836  6 +     23964 A-------------T---T---ATT----
i Inia_geoffrensis.IniGeo_flattened_line_48101           I 5 C 0
s Jaculus_jaculus.JH725527.1                               8278326  8 -   9596543 a-------------t---t---tat--tt
i Jaculus_jaculus.JH725527.1                             I 10 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                3211  6 -      3359 A-------------T---T---ATT----
i Kogia_breviceps.KogBre_flattened_line_192630           I 5 C 0
s Leptonychotes_weddellii.KB714746.1                       3044303 17 +   3914936 a-AACAAACTCAAGC---C---AA-----
i Leptonychotes_weddellii.KB714746.1                     I 5 C 0
s Lepus_americanus.LepAme_scaffold_107385                     7973  8 -     14121 G-------------T---T---ATT--TT
i Lepus_americanus.LepAme_scaffold_107385                I 12 C 0
s Lipotes_vexillifer.KE559953.1                             268900  6 -    662738 A-------------T---T---ATT----
i Lipotes_vexillifer.KE559953.1                          I 5 C 0
s Lophocebus_aterrimus.ctg367                              1439944  6 +   1826925 A-------------T---T---A----TT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                               9753  6 +     40492 A-------------T---T---A----TT
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679007  6 +  60120075 A-------------T---T---A----TT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 15525  6 -     26193 A-------------T---T---A----TT
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            83301  6 -    114318 A-------------T---T---A----TT
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  8992  6 -     23192 A-------------T---T---A----TT
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                18456  6 -     29190 A-------------T---T---A----TT
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27034  6 +     37952 A-------------T---T---A----TT
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842113  6 + 187317192 a-------------t---t---a----tt
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25460689  6 -  25927173 a-------------t---t---a----tt
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  82890  6 +     89720 A-------------T---T---A----TT
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 9883  6 +     20474 A-------------T---T---A----TT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   9680  6 -     14993 A-------------T---T---A----TT
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  332542  6 -    668171 A-------------T---T---A----TT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 7992  6 -     24072 A-------------T---T---A----TT
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               28623  6 -     45290 A-------------T---T---A----TT
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91878  6 +     94391 A-------------T---T---ATT----
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 5 C 0
s Mandrillus_leucophaeus.scaffold280                      23940215  6 -  24302211 A-------------T---T---A----TT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354327  6 +    752769 A-------------T---T---A----TT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33104450  8 -  40650429 a-------------t---a---att--tc
i Marmota_marmota.CZRN01000018.1                         I 10 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        14569  6 -    207569 A-------------T---T---ATT----
i Megaderma_lyra.MegLyr_scaffold_4542                    I 6 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             11564 18 +     13704 A-AACAAACTCAAGC---C---AAG----
i Mellivora_capensis.MelCap_flattened_line_69365         I 5 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 34516  8 +    140813 A-------------T---T---AAT--TT
i Meriones_unguiculatus.MerUng_scaffold_7390             I 596 C 0
s Mesocricetus_auratus.KB708134.1                         12183987  8 -  29670104 A-------------A---T---GAT--GT
i Mesocricetus_auratus.KB708134.1                        I 611 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    4506  6 +     10310 A-------------T---T---ATT----
i Mesoplodon_bidens.MesBid_scaffold_108144               I 5 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                17095  6 -     19307 A-------------T---T---ATT----
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 2
s Microtus_ochrogaster.CM001695.1                         11262264  8 -  27267610 A-------------T---T---GAT--TT
i Microtus_ochrogaster.CM001695.1                        I 590 C 0
s Miopithecus_ogouensis.k141_534055                          11890  6 -     28506 A-------------T---T---A----TT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         7170 18 -      8324 A-AACAAACTCAAGC---C---AAG----
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 5 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    28015  6 -    437263 A-------------T---T---ATT----
i Monodon_monoceros.MonMon_M_scaffold_103                I 5 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142887  6 -    366855 A-------------T---T---ATT----
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 5
s Moschus_moschiferus.MosMos_scaffold_13123                   1913  6 +     82753 a-------------t---g---agt----
i Moschus_moschiferus.MosMos_scaffold_13123              I 5 C 0
s Mus_caroli.LT608237.1                                   84362895  8 - 120012414 A-------------T---T---GAT--TT
i Mus_caroli.LT608237.1                                  I 357 C 0
s Mus_musculus.chr8                                       87652394  8 - 129401213 A-------------T---T---GAT--TT
i Mus_musculus.chr8                                      I 871 C 0
s Mus_pahari.LT608297.1                                   31357127  9 -  89631738 A-------------T---T---GGT-TTT
i Mus_pahari.LT608297.1                                  I 930 C 0
s Mus_spretus.CM004101.1                                  90754885  8 - 130317789 A-------------T---T---GAT--TT
i Mus_spretus.CM004101.1                                 I 1301 C 0
s Mustela_putorius.JH418006.1                               302959 18 -  14710649 A-AACAAACTCAAGC---C---AAG----
i Mustela_putorius.JH418006.1                            I 5 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     72342  5 -     80779 ----------------------TGT--AT
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 7 I 3
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190522 11 +    196477 C-------------T---TCGATTT--CT
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 9 C 0
s Nannospalax_galili.KL204047.1                            2036700  8 -   3037898 A-------------T---T---GAT--TT
i Nannospalax_galili.KL204047.1                          I 1022 C 0
s Nasalis_larvatus.k141_413338                               17944  6 +     21681 A-------------C---T---A----TT
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308763 18 +  31847680 a-AACAAACTCAAGC---C---AAG----
i Neomonachus_schauinslandi.NINY01007730.1               I 5 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5866984  6 +   7148211 A-------------T---T---ATT----
i Neophocaena_asiaeorientalis.KZ687982.1                 I 5 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    759095  6 +    783361 A-------------C---T---ATC----
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 2
s Ochotona_princeps.JH802162.1                             1365416  8 +   3988456 g-------------g---T---ATT--TT
i Ochotona_princeps.JH802162.1                           I 8 C 0
s Odobenus_rosmarus.KB229312.1                              507905 18 -   2017862 A-AACAAACTCACGC---C---AAG----
i Odobenus_rosmarus.KB229312.1                           I 5 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          77745  6 -    150152 a-------------t---g---agt----
i Okapia_johnstoni.LVCL01S0005463.1                      I 1 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   26903  8 +     28053 A-------------T---T---GAT--TT
i Ondatra_zibethicus.OndZib_scaffold_46174               I 578 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    81916  8 +    102263 A-------------T---T---GAT--TT
i Onychomys_torridus.OnyTor_scaffold_2986                I 552 C 0
s Orcinus_orca.KB316932.1                                  2782893  6 -  10937097 A-------------T---T---ATT----
i Orcinus_orca.KB316932.1                                I 5 C 0
s Oryctolagus_cuniculus.CM000791.1                        67148874  8 + 174332312 g-------------t---T---ATT--TT
i Oryctolagus_cuniculus.CM000791.1                       I 12 C 0
s Ovis_aries.CM001607.2                                   17587021  6 +  44047080 a-------------t---g---agt----
i Ovis_aries.CM001607.2                                  I 5 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      175006  6 -    191736 a-------------t---g---agt----
i Ovis_canadensis.OviCan_scaffold_2572                   I 5 C 0
s Pan_paniscus.KQ411613.1                                    46891  9 +     80009 a-------------t---T---ATTG-TT
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.KZ622849.1                                 25080  9 +    110857 a-------------t---t---ATTG-TT
i Pan_troglodytes.KZ622849.1                             I 1003 I 20
s Panthera_onca.PanOnc_flattened_line_3271                  152367 13 +    230217 CTAACA---T---AC---A---GTT----
i Panthera_onca.PanOnc_flattened_line_3271               I 5 C 0
s Panthera_pardus.KV860321.1                                265576 13 +  18783137 c------taacatac---a---gtt----
i Panthera_pardus.KV860321.1                             I 5 C 0
s Panthera_tigris.KE722367.1                               4722456 13 -   8748460 CTAACA---T---AC---A---GTT----
i Panthera_tigris.KE722367.1                             I 5 C 0
s Pantholops_hodgsonii.KE114653.1                          1265910  6 -   2937107 a-------------t---g---agt----
i Pantholops_hodgsonii.KE114653.1                        I 5 C 0
s Papio_anubis.CM001495.2                                183446017  6 + 183742232 a-------------t---t---a----tt
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             9667  6 +     20448 A-------------T---T---A----TT
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20566475  6 +  20919399 A-------------T---T---A----TT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   8407  6 +     41871 A-------------T---T---A----TT
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    11700  6 +     27711 A-------------T---T---A----TT
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  2699  6 -     11374 A-------------T---T---A----TT
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13861 15 -     78924 A-TAC---CTACAGT---T---ATT----
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 5 C 0
s Peromyscus_maniculatus.KI615324.1                       18196545  7 -  18517816 --------------T---T---GAT--TT
i Peromyscus_maniculatus.KI615324.1                      I 605 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     29296  4 -     29689 A-------------T---C---A------
i Petromus_typicus.PetTyp_scaffold_42190                 I 8 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               9938  6 +     63832 A-------------T---T---ATT----
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 5 C 0
s Piliocolobus_badius.k141_1142974                            1018  6 +     68526 A-------------T---T---A----TT
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        41164  6 +     89929 A-------------T---T---A----TT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            42578  6 +     51399 A-------------T---T---A----TT
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14298815  6 -  14605196 A-------------T---T---A----TT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1476471                              4427 12 +     26961 A-------------TGATT---ATTG-TT
i Pithecia_albicans.k141_1476471                         I 5 C 0
s Pithecia_chrysocephala.k141_839575                           572 12 +     23417 A-------------TGATT---ATTG-TT
i Pithecia_chrysocephala.k141_839575                     I 5 C 0
s Pithecia_hirsuta.k141_305604                                4419 12 +     29694 A-------------TGATT---ATTG-TT
i Pithecia_hirsuta.k141_305604                           I 5 C 0
s Pithecia_mittermeieri.k141_446740                          29445 12 +     52772 A-------------TGATT---ATTG-TT
i Pithecia_mittermeieri.k141_446740                      I 5 C 0
s Pithecia_pissinattii.k141_1824269                           4441 12 +     26198 A-------------TGATT---ATTG-TT
i Pithecia_pissinattii.k141_1824269                      I 5 C 0
s Pithecia_pithecia.tarseq_165                             3940990 12 +   4542175 A-------------TGATT---ATTG-TT
i Pithecia_pithecia.tarseq_165                           I 5 C 0
s Pithecia_vanzolinii.k141_1697688                            4405 12 -     23490 A-------------TGATT---ATTG-TT
i Pithecia_vanzolinii.k141_1697688                       I 5 C 0
s Plecturocebus_bernhardi.k141_2549090                        8668 12 -     39866 A-------------TGATT---ATTG-TT
i Plecturocebus_bernhardi.k141_2549090                   I 5 C 0
s Plecturocebus_brunneus.k141_1495506                        17834 12 +     34906 A-------------TGATT---ATTG-TT
i Plecturocebus_brunneus.k141_1495506                    I 5 C 0
s Plecturocebus_caligatus.k141_1382851                       22098 12 +     87950 A-------------TGATT---ATTG-TT
i Plecturocebus_caligatus.k141_1382851                   I 5 C 0
s Plecturocebus_cinerascens.k141_1164729                     22925 12 +     88961 A-------------TGATT---ATTG-TT
i Plecturocebus_cinerascens.k141_1164729                 I 5 C 0
s Plecturocebus_cupreus.k141_2351393                          8596 12 +     39403 A-------------TGATT---ATTG-TT
i Plecturocebus_cupreus.k141_2351393                     I 5 C 0
s Plecturocebus_dubius.k141_1058799                          22377 12 -     87928 A-------------TGATT---ATTG-TT
i Plecturocebus_dubius.k141_1058799                      I 5 C 0
s Plecturocebus_grovesi.k141_2013005                         29336 12 +     60166 A-------------TGATT---ATTG-TT
i Plecturocebus_grovesi.k141_2013005                     I 5 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      29533 12 +     67232 A-------------TGATT---ATTG-TT
i Plecturocebus_hoffmannsi.k141_3303950                  I 5 C 0
s Plecturocebus_miltoni.k141_349282                          25006 12 +     90634 A-------------TGATT---ATTG-TT
i Plecturocebus_miltoni.k141_349282                      I 5 C 0
s Plecturocebus_moloch.k141_1031110                          22378 12 -     89403 A-------------TGATT---ATTG-TT
i Plecturocebus_moloch.k141_1031110                      I 5 C 0
s Pongo_abelii.CM009266.2                                189133910  9 + 189387572 A-------------T---T---ATTG-TT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9573519  9 +   9816681 A-------------T---T---ATTG-TT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76128  6 -     81375 A-------------T---T---A----TT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              7945  6 +     19060 A-------------T---T---A----TT
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            12157  8 -     21651 A-------------T---T---GAT--TT
i Psammomys_obesus.NESX01036370.1                        I 591 C 0
s Pteronotus_parnellii.KE909381.1                            16375  6 -     21811 a-------------t---t---att----
i Pteronotus_parnellii.KE909381.1                        C 0 I 5
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41766 18 +     42204 A-AACAAACTCAAGC---C---AAG----
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 5 C 0
s Puma_concolor.QAVW01001104.1                            20275526 13 -  38429054 c------taacatac---a---gtt----
i Puma_concolor.QAVW01001104.1                           I 5 C 0
s Pygathrix_cinerea.k141_1153803                             17929  6 -     91421 A-------------T---T---A----TT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612053  6 +   7812017 A-------------T---T---A----TT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             17960  6 -     72585 A-------------T---T---A----TT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6491  6 +     55207 a-------------t---g---agt----
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 5 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        368225  6 -   3329780 a-------------t---t---att----
i Rhinolophus_sinicus.LVEH01000134.1                     I 6 C 0
s Rhinopithecus_bieti.k119_217274                             9632  6 -     11128 A-------------T---T---A----TT
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91238996  6 - 195417433 a-------------t---t---a----tt
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7674643  6 +   7961872 A-------------T---T---A----TT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89067  6 -     96226 A-------------T---T---ATT----
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 5 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154423  2 -    313613 ------------------C---A------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 5 C 0
s Semnopithecus_entellus.k141_1672505                         2802  6 -     12572 A-------------T---T---A----TT
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      29654  6 +     39453 A-------------T---T---A----TT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           10162  6 +     27826 A-------------T---T---A----TT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             9698  6 -     19483 A-------------T---T---A----TT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3001  6 -     12762 A-------------T---T---A----TT
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           2849  6 +     13763 A-------------T---T---A----TT
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     2068  8 -     30804 A-------------T---T---GAT--TT
i Sigmodon_hispidus.SigHis_scaffold_42075                I 607 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               4960  4 +   1910179 A-------------T---T---G------
i Solenodon_paradoxus.SolPar_flattened_line_126          I 9 C 0
s Sorex_araneus.JH798187.1                                13652225  6 -  18376816 a-------------t---t---atg----
i Sorex_araneus.JH798187.1                               I 11 C 0
s Spermophilus_dauricus.KZ294078.1                         1955309  8 -   3870691 a-------------t---a---att--tt
i Spermophilus_dauricus.KZ294078.1                       I 10 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             32240 18 +     97271 A-AACAAACTCAAGC---C---AAG----
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 5 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              19546  4 -    196729 --------------C---T----CT----
i Suricata_suricatta.SurSur_flattened_line_6629          I 3 C 0
s Sus_scrofa.CM000828.4                                    6812357  6 +  69701581 a-------------c---t---att----
i Sus_scrofa.CM000828.4                                  I 5 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                12044  6 +     41958 A-------------T---T---ATT----
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 6
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73907 11 +    116680 C-------------T---TTGAATT--CT
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 9 C 0
s Theropithecus_gelada.CM009954.1                        186431323  6 + 186847797 a-------------t---t---a----tt
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106588  4 +    114563 A-------------T---T---A------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 8 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   7629 11 +      8208 C-------------TTTGT---ACT--CT
i Tolypeutes_matacus.TolMat_scaffold_228639              I 8 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     82436  6 +    610378 A-------------T---T---ATT----
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 2
s Trachypithecus_auratus.k141_722599                         13747  6 -     20410 A-------------T---T---A----TT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      2863  6 -     12674 A-------------T---T---A----TT
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       13855  6 +     19930 A-------------T---T---A----TT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      10250  6 -     19997 A-------------T---T---A----TT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            50395  6 -     60166 A-------------T---T---A----TT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        17858  6 -     27529 A-------------T---T---A----TT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     17808  6 -     18194 A-------------T---T---A----TT
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                          11520  6 -     21137 A-------------T---T---A----TT
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                   10220  6 -     10723 A-------------T---T---A----TT
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         9397  6 +      9834 A-------------T---T---A----TT
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        27720  6 +     32220 A-------------T---T---A----TT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5941817  6 +   6242583 A-------------T---T---A----TT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11068  6 +     20839 A-------------T---T---A----TT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2157200  8 +   4065304 a-------------a---t---att--tt
i Tupaia_chinensis.KB320699.1                            I 8 I 1
s Tursiops_truncatus.MRVK01000835.1                       15739138  3 +  33153633 ----------------------ATT----
i Tursiops_truncatus.MRVK01000835.1                      I 5 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54518  6 -     77625 A-------------T---T---ACT----
i Uropsilus_gracilis.UroGra_scaffold_12083               I 5 C 0
s Ursus_maritimus.KK499267.1                               4851623 18 -   5085361 A-AACAAACTCAAGG---G---AAG----
i Ursus_maritimus.KK499267.1                             I 5 C 0
s Vicugna_pacos.KN270157.1                                 5373008  6 -   5488506 a-------------t---t---att----
i Vicugna_pacos.KN270157.1                               I 7 C 0
s Xerus_inauris.XerIna_scaffold_2302                          2314  6 +    224448 ------------------A---ATT--TC
i Xerus_inauris.XerIna_scaffold_2302                     I 9 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      16063  8 +     63895 A-------------T---T---TAT--TT
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 10 C 0
e Lagothrix_lagothricha.k141_1005387                         15287  0 -     38430 C
e Ateles_paniscus.k141_457735                                21129  0 +     72325 C
e Ateles_marginatus.k141_803263                              13240  0 -     40414 C
e Ateles_geoffroyi_a.k141_833924                                8856  0 -     89868 C
e Ateles_chamek.k141_1806455                                 27084  0 -     30947 C
e Ateles_belzebuth.k141_445860                               44280  0 -     48001 C
e Ateles_geoffroyi_b.tarseq_1536                             21209484  0 -  21539123 C
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Alouatta_seniculus.k141_117119                             16471  0 +     50774 C
e Alouatta_puruensis.k141_362188                              2019  0 +      5663 C
e Alouatta_palliata.k141_2135620                              5287  0 +     47717 C
e Alouatta_nigerrima.k141_1929159                             1292  0 +     30492 C
e Alouatta_macconnelli.k141_918386                            2334  0 -      9457 C
e Alouatta_juara.k141_1302312                                 1197 57 +     27940 I
e Alouatta_discolor.k141_566626                              12779  0 +     28687 C
e Alouatta_caraya.k141_1701091                                2327  0 -     36483 C
e Alouatta_belzebul.k141_3560514                              9218  0 +     51355 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 12422 320 -     43706 T
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_40725                     822 276 +     27266 I
e Tarsius_wallacei.k141_254427                                1877  3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080  3 +     70052 I
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Rattus_norvegicus.chr16                                 53571770 803 +  90668790 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Pteropus_alecto.KB030862.1                              22978014  7 +  28871421 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             2992 11 +     22620 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Otocyon_megalotis.JAEUCK010005147.1                       463984 325 -    559221 T
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9150892 182 -   9404916 T
e Myotis_myotis.MyoMyo_scaffold_281845                        1211 12 +      1835 I
e Myotis_lucifugus.GL429869.1                              3905059 12 -   4330536 I
e Myotis_davidii.KB100139.1                                1588961 10 -   6019432 I
e Myotis_brandtii.KE162005.1                                279962 1755 -  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           8065 12 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             35221  4 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1851541  4 +   8254450 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Manis_pentadactyla.KN006162.1                              51496  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              19478  0 +    737560 C
e Lycaon_pictus.CM007581.1                                17956957 950 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Lasiurus_borealis.LasBor_scaffold_50988                    16384 22 +     29960 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2146969 11 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Crocidura_indochinensis.CroInd_scaffold_37019               4143  0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Cephalopachus_bancanus.k141_1423433                         6085  3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Carlito_syrichta.NW_007259797.1                           156587  3 -    496798 I
e Canis_lupus_orion.HG994398.1                            18502019 950 +  63665305 I
e Canis_lupus_familiaris.chr16                            17960717 950 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9036246 952 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     1546 950 -     43241 I
e CanFam4.chr16                                           17800803 952 -  60362399 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       9557  7 +     62944 G-T-A----T------ATT
s Acinonyx_jubatus.LLWD01001279.1                           828532  7 -   1699592 g-t-a----t------att
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 2
s Acomys_cahirinus.AcoCah_scaffold_12655                     72509  7 +     87051 G-T-A----T------ATT
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 2
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511839  8 -  29979442 gct-c----t------ata
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 2
s Ailurus_fulgens.LNAC01001112.1                             80913  8 -    347723 gct-a----t------ata
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 2
s Allactaga_bullata.AllBul_scaffold_9566                     75632  7 -     89534 A-T-A----T------ATT
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 3
s Allenopithecus_nigroviridis.k141_3361533                   17451  7 -     52922 G-T-A----T------ATT
i Allenopithecus_nigroviridis.k141_3361533               C 0 I 2
s Allochrocebus_lhoesti.k141_4309873                         17379  7 -     28001 G-T-A----T------ATT
i Allochrocebus_lhoesti.k141_4309873                     C 0 I 2
s Allochrocebus_preussi.k141_1442296                          7879  6 -     18505 G-T-A----T------AT-
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           8729  7 -     12518 G-T-A----T------ATT
i Allochrocebus_solatus.k141_166128                      C 0 I 2
s Ammotragus_lervia.NIVO01071767.1                          676727  7 -   2318259 g-c-a----t------gct
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 2
s Anoura_caudifer.AnoCau_scaffold_1412                      186603  3 +    412891 ----------------AAT
i Anoura_caudifer.AnoCau_scaffold_1412                   I 2 I 2
s Antilocapra_americana.AntAmePen_scaffold_12469             99206  7 -    100397 a-c-a----t------gct
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 I 2
s Aplodontia_rufa.AprRuf_scaffold_68852                      13858  7 +     20879 G-T-A----T------ATT
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 2
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6004  4 +     43469 ---------T------ATT
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 5 I 2
s Balaenoptera_acutorostrata.KI537508.1                   15192991  7 +  23207421 G-T-G----T------ATT
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 2
s Balaenoptera_bonaerensis.DF707048.1                         3456  7 -     18090 G-T-G----T------ATT
i Balaenoptera_bonaerensis.DF707048.1                    C 0 I 2
s Beatragus_hunteri.BeaHun_scaffold_50177                    27633  7 +     34529 g-c-a----t------gct
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 2
s Bison_bison.KN261452.1                                    200724  7 -    288883 g-c-a----t------gct
i Bison_bison.KN261452.1                                 C 0 I 2
s Bos_indicus.CM003047.1                                  20273909  7 +  48749331 g-c-a----t------gct
i Bos_indicus.CM003047.1                                 C 0 I 2
s Bos_mutus.JH880303.1                                     1126469  7 -   1948126 g-c-a----t------gct
i Bos_mutus.JH880303.1                                   C 0 I 2
s Bos_taurus.CM000203.6                                   18084547  7 +  45695690 g-c-a----t------gct
i Bos_taurus.CM000203.6                                  C 0 I 2
s Bubalus_bubalis.KI419123.1                               2820223  7 +   4408762 g-c-a----t------gct
i Bubalus_bubalis.KI419123.1                             C 0 I 2
s Cacajao_ayresi.k141_552049                                102048  7 -    122966 A-T-A----T------ATT
i Cacajao_ayresi.k141_552049                             C 0 I 4
s Cacajao_calvus.k141_5142                                   61553  7 +     81800 A-T-A----T------ATT
i Cacajao_calvus.k141_5142                               C 0 I 4
s Cacajao_hosomi.k141_81245                                  30733  7 -     95584 A-T-A----T------ATT
i Cacajao_hosomi.k141_81245                              C 0 I 4
s Cacajao_melanocephalus.k141_619699                         54834  7 -    119600 A-T-A----T------ATT
i Cacajao_melanocephalus.k141_619699                     C 0 I 4
s Camelus_bactrianus.KN276810.1                           10003495  7 -  17673402 g-t-g----t------att
i Camelus_bactrianus.KN276810.1                          C 0 I 2
s Camelus_dromedarius.KN272107.1                           2335971  7 -   7040546 g-t-g----t------att
i Camelus_dromedarius.KN272107.1                         C 0 I 2
s Camelus_ferus.KB017975.1                                  404270  7 -   1652518 g-t-g----t------att
i Camelus_ferus.KB017975.1                               C 0 I 2
s Capra_aegagrus.CM003241.1                               18830841  7 +  46296322 g-c-a----t------gct
i Capra_aegagrus.CM003241.1                              C 0 I 2
s Capra_hircus.CM004588.1                                 18061561  7 -  44709034 g-c-a----t------gct
i Capra_hircus.CM004588.1                                C 0 I 2
s Capromys_pilorides.CapPil_scaffold_65020                    2168  7 -     12242 A-T-G----T------GTA
i Capromys_pilorides.CapPil_scaffold_65020               I 3 I 2
s Carollia_perspicillata.CarPer_scaffold_92756                6344  4 -     11696 ---------T------ATT
i Carollia_perspicillata.CarPer_scaffold_92756           I 5 I 2
s Castor_canadensis.CasCan_scaffold_2074                    138509  7 +    179628 G-C-A----T------ATT
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 2
s Catagonus_wagneri.CatWag_scaffold_2839                     94793  7 +    217609 A-G-A----T------ATT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 2
s Cercocebus_atys.KQ010504.1                               4478408  7 +   4669795 g-t-a----t------att
i Cercocebus_atys.KQ010504.1                             C 0 I 2
s Cercocebus_chrysogaster.k141_1540778                        2902  7 +     17872 G-T-A----T------ATT
i Cercocebus_chrysogaster.k141_1540778                   C 0 I 2
s Cercocebus_lunulatus.k141_3342297                           3497  7 -     14043 G-T-A----T------ATT
i Cercocebus_lunulatus.k141_3342297                      C 0 I 2
s Cercocebus_torquatus.k141_3057011                          11592  7 +     27781 G-T-A----T------ATT
i Cercocebus_torquatus.k141_3057011                      C 0 I 2
s Cercopithecus_ascanius.k141_1024104                        11739  7 -     20310 G-T-A----T------ATT
i Cercopithecus_ascanius.k141_1024104                    C 0 I 2
s Cercopithecus_cephus.k141_1078548                          14719  7 +     29689 G-T-A----T------ATT
i Cercopithecus_cephus.k141_1078548                      C 0 I 2
s Cercopithecus_diana.k141_1150327                            9475  7 -     20078 G-T-A----T------ATT
i Cercopithecus_diana.k141_1150327                       C 0 I 2
s Cercopithecus_hamlyni.k141_187466                          17397  6 -     27936 G-T-A----T------AT-
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            6259  7 -     17152 G-T-A----T------ATT
i Cercopithecus_lowei.k141_1854285                       C 0 I 2
s Cercopithecus_albogularis.ctg5                                38825989  7 +  39242232 A-T-A----T------ATT
i Cercopithecus_albogularis.ctg5                               C 0 I 2
s Cercopithecus_mona.ctg39                                21225493  7 -  21565898 G-T-A----T------ATT
i Cercopithecus_mona.ctg39                               C 0 I 2
s Cercopithecus_neglectus.k141_2526306                       42613  7 -     53127 G-T-A----T------ATT
i Cercopithecus_neglectus.k141_2526306                   C 0 I 2
s Cercopithecus_nictitans.k141_1119862                        2862  7 +     13442 G-T-A----T------ATT
i Cercopithecus_nictitans.k141_1119862                   C 0 I 2
s Cercopithecus_petaurista.k141_807961                       17408  7 -     27947 G-T-A----T------ATT
i Cercopithecus_petaurista.k141_807961                   C 0 I 2
s Cercopithecus_pogonias.k141_822820                         17388  7 +     17596 G-T-A----T------ACT
i Cercopithecus_pogonias.k141_822820                     C 0 I 2
s Cercopithecus_roloway.k141_2581234                          3444  7 +     14005 G-T-A----T------ATT
i Cercopithecus_roloway.k141_2581234                     C 0 I 1
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1747  3 -      8501 C-A-A--------------
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheracebus_lucifer.k141_49986                                664  7 -     17098 G-T-A----T------ATT
i Cheracebus_lucifer.k141_49986                          C 0 I 4
s Cheracebus_lugens.k141_1393925                               540  7 +     17877 G-T-A----T------ATT
i Cheracebus_lugens.k141_1393925                         C 0 I 4
s Cheracebus_regulus.k141_471822                            158107  7 -    216457 G-T-A----T------ATT
i Cheracebus_regulus.k141_471822                         C 0 I 4
s Cheracebus_torquatus.k141_1170026                          62582  7 +     76511 G-T-A----T------ATT
i Cheracebus_torquatus.k141_1170026                      C 0 I 4
s Chinchilla_lanigera.JH722012.1                           1254092  7 +   2543920 a-t-a----t------gtg
i Chinchilla_lanigera.JH722012.1                         C 0 I 2
s Chiropotes_israelita.k141_747660                           99170  7 +    146308 G-T-A----T------ATT
i Chiropotes_israelita.k141_747660                       C 0 I 4
s Chiropotes_sagulatus.k141_1421488                          30978  7 -     50570 G-T-A----T------ATT
i Chiropotes_sagulatus.k141_1421488                      C 0 I 4
s Chlorocebus_aethiops.ctg25                              18431312  7 -  18827391 G-T-A----T------ATT
i Chlorocebus_aethiops.ctg25                             C 0 I 2
s Chlorocebus_pygerythrus.k141_1025673                       17818  7 -     50209 G-T-A----T------ATT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 I 2
s Chlorocebus_sabaeus.CM001947.1                         135424817  7 + 135778131 g-t-a----t------att
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 2
s Colobus_angolensis.KN981557.1                            1913320  7 +   2368649 G-T-A----C------ATT
i Colobus_angolensis.KN981557.1                          C 0 I 1
s Colobus_guereza.LG01                                   199951569  7 + 200372422 G-T-A----T------ATT
i Colobus_guereza.LG01                                   C 0 I 1
s Colobus_polykomos.k141_906115                              39845  7 +     84244 G-T-A----T------ATT
i Colobus_polykomos.k141_906115                          C 0 I 1
s Condylura_cristata.JH655891.1                           17549276  7 -  53390261 G-T-T----T------ATT
i Condylura_cristata.JH655891.1                          C 0 I 2
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1723  7 +     23735 T-T-A----T------ACT
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 I 2
s Cricetomys_gambianus.CriGam_scaffold_18520                 51774  7 +     63868 A-C-A----T------ATC
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 2
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29716  7 -     87169 G-T-A----T------ATT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 2
s Ctenodactylus_gundi.CteGun_scaffold_65                    838274  7 +   1526836 G-T-A----T------ATA
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 2
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37039  7 +     51376 A-T-A----T------GTA
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 3 I 2
s Dasypus_novemcinctus.JH564415.1                            64766  3 +   2246927 C-A-A--------------
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16812638  7 +  35494412 G-T-G----T------ATT
i Delphinapterus_leucas.KZ290073.1                       C 0 I 2
s Desmodus_rotundus.KZ672289.1                             8631354  4 +  20541912 ---------C------att
i Desmodus_rotundus.KZ672289.1                           I 2 I 2
s Dinomys_branickii.DinBra_scaffold_21862                    37581  7 +     67921 A-T-A----T------GTG
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 2
s Elaphurus_davidianus.JRFZ01104969.1                       311877  7 +    607251 a-c-a----t------gct
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 2
s Ellobius_lutescens.LOEQ01008920.1                          22290  7 -    110024 G-T-A----T------GTT
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 2
s Ellobius_talpinus.LOJH01081419.1                            2196  7 +      8657 G-C-A----T------GTT
i Ellobius_talpinus.LOJH01081419.1                       C 0 I 2
s Enhydra_lutris.KZ291758.1                               16330870  8 -  41312741 GTT-A----T------ATA
i Enhydra_lutris.KZ291758.1                              C 0 I 2
s Erinaceus_europaeus.JH835339.1                           3329441  3 -   7059049 G-T-A--------------
i Erinaceus_europaeus.JH835339.1                         C 0 I 1459
s Erythrocebus_patas.Contig38                             21207985  7 -  21539334 G-T-A----T------ATT
i Erythrocebus_patas.Contig38                            C 0 I 2
s Eschrichtius_robustus.EscRob_flattened_line_8968           12303  7 +    133382 G-T-G----T------ATT
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 2
s Eubalaena_japonica.EubJap_flattened_line_31514             26256  7 -     44125 G-T-G----T------ATT
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 I 2
s Felis_catus.CM001381.2                                  20238175  7 + 206538554 g-t-a----t------att
i Felis_catus.CM001381.2                                 C 0 I 2
s Felis_catus_fca126.CM031415.1                           20197018  7 + 205367284 G-T-A----T------ATT
i Felis_catus_fca126.CM031415.1                          C 0 I 2
s Felis_nigripes.FelNig_flattened_line_20823                 10772  7 -     36744 G-T-A----T------ATT
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 2
s Fukomys_damarensis.KN121974.1                             851604  6 +   3816255 --T-A----T------AGT
i Fukomys_damarensis.KN121974.1                          C 0 I 2
s Galeopterus_variegatus.GalVar_scaffold_108840               2681 13 -      9135 G-T-A----TGAGTATACT
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 I 2
s Giraffa_tippelskirchi.LVKQ01S007888.1                     609840  7 -    660261 a-c-a----t------gct
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 I 2
s Glis_glis.GliGli_scaffold_19807                            32148  7 +     49224 G-T-A----T------ATC
i Glis_glis.GliGli_scaffold_19807                        C 0 I 2
s Gorilla_beringei.k141_3596273                              18798  7 -     32273 G-T-A----T------ATT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186340935  7 + 186649187 G-t-a----t------att
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33823  7 +     78134 G-T-A----T------ATC
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 4
s Helogale_parvula.HelPar_flattened_line_2585               243550  7 +    327341 G-T-A----T------ATT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 2
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 19054  7 +     36099 g-c-a----t------gct
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 I 2
s Heterocephalus_glaber.JH602082.1                        20663387  6 +  22651954 --T-A----T------AAT
i Heterocephalus_glaber.JH602082.1                       C 0 I 2
s Hipposideros_armiger.JXIK01000431.1                       111753  7 +   1711038 g-t-a----t------att
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 2
s Hipposideros_galeritus.HipGal_scaffold_101188                323  7 +      9903 G-T-A----T------ATT
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 I 2
s Hoolock_leuconedys.ctg274                                    437600  7 +    630532 G-T-A----T------ATT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46256  7 +     55795 A-T-A----T------ATT
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 2
s Hystrix_cristata.HysCri_scaffold_5660                      84276  7 +    135385 A-T-A----T------GTG
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 2
s Ictidomys_tridecemlineatus.JH393364.1                    7522171  7 -   7955117 A-T-G----T------ATC
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 2
s Inia_geoffrensis.IniGeo_flattened_line_48101               23842  7 +     23964 G-T-G----T------ATT
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 I 2
s Jaculus_jaculus.JH725527.1                               8278334  7 -   9596543 a-t-a----t------agt
i Jaculus_jaculus.JH725527.1                             C 0 I 3
s Kogia_breviceps.KogBre_flattened_line_192630                3217  7 -      3359 G-T-G----T------ATT
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 I 2
s Leptonychotes_weddellii.KB714746.1                       3044320  8 +   3914936 ACt-a----t------ata
i Leptonychotes_weddellii.KB714746.1                     C 0 I 2
s Lepus_americanus.LepAme_scaffold_107385                     7981  3 -     14121 ----------------ATC
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 2
s Lipotes_vexillifer.KE559953.1                             268906  7 -    662738 G-T-G----T------ATT
i Lipotes_vexillifer.KE559953.1                          C 0 I 2
s Lophocebus_aterrimus.ctg367                              1439950  7 +   1826925 G-T-A----T------ATT
i Lophocebus_aterrimus.ctg367                            C 0 I 2
s Macaca_arctoides.k141_2326796                               9759  7 +     40492 G-T-A----C------ATT
i Macaca_arctoides.k141_2326796                          C 0 I 2
s Macaca_assamensis.Contig5                               59679013  7 +  60120075 G-T-A----T------ATT
i Macaca_assamensis.Contig5                              C 0 I 2
s Macaca_cyclopis.k119_18836                                 15531  7 -     26193 G-T-A----T------ATT
i Macaca_cyclopis.k119_18836                             C 0 I 2
s Macaca_fascicularis.k141_814140                            83307  7 -    114318 G-T-A----T------ATT
i Macaca_fascicularis.k141_814140                        C 0 I 2
s Macaca_fuscata.k119_255327                                  8998  7 -     23192 G-T-A----T------ATT
i Macaca_fuscata.k119_255327                             C 0 I 2
s Macaca_leonina.k141_3550399                                18462  7 -     29190 G-T-A----T------ATT
i Macaca_leonina.k141_3550399                            C 0 I 2
s Macaca_maura.k141_2733130                                  27040  7 +     37952 G-T-A----T------ATT
i Macaca_maura.k141_2733130                              C 0 I 2
s Macaca_mulatta.NC_041758.1                             186842119  7 + 187317192 g-t-a----t------att
i Macaca_mulatta.NC_041758.1                             C 0 I 2
s Macaca_nemestrina.KQ007038.1                            25460695  7 -  25927173 g-t-a----t------att
i Macaca_nemestrina.KQ007038.1                           C 0 I 2
s Macaca_nigra.k141_1655396                                  82896  7 +     89720 G-T-A----T------ATT
i Macaca_nigra.k141_1655396                              C 0 I 2
s Macaca_radiata.k141_3680011                                 9889  7 +     20474 G-T-A----T------ATT
i Macaca_radiata.k141_3680011                            C 0 I 2
s Macaca_siberu.k141_635500                                   9686  7 -     14993 G-T-A----T------ATT
i Macaca_siberu.k141_635500                              C 0 I 2
s Macaca_silenus.Contig273                                  332548  7 -    668171 G-T-A----T------ATT
i Macaca_silenus.Contig273                               C 0 I 2
s Macaca_thibetana.k99_256239                                 7998  7 -     24072 G-T-A----C------ATT
i Macaca_thibetana.k99_256239                            C 0 I 2
s Macaca_tonkeana.k141_1498238                               28629  7 -     45290 G-T-A----T------ATT
i Macaca_tonkeana.k141_1498238                           C 0 I 2
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91884  8 +     94391 A-TTT----T------ATT
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 2
s Mandrillus_leucophaeus.scaffold280                      23940221  7 -  24302211 G-T-A----T------ATT
i Mandrillus_leucophaeus.scaffold280                     C 0 I 2
s Mandrillus_sphinx.Contig270                               354333  7 +    752769 G-T-A----T------ATT
i Mandrillus_sphinx.Contig270                            C 0 I 2
s Manis_javanica.JSZB01003497.1                              19478  6 +    737560 --t-a----c------att
i Manis_javanica.JSZB01003497.1                          C 0 I 2
s Manis_pentadactyla.KN006162.1                              51496  6 -    317179 --t-a----t------att
i Manis_pentadactyla.KN006162.1                          C 0 I 2
s Marmota_marmota.CZRN01000018.1                          33104458  7 -  40650429 a-t-g----t------aTC
i Marmota_marmota.CZRN01000018.1                         C 0 I 2
s Megaderma_lyra.MegLyr_scaffold_4542                        14575  7 -    207569 G-C-G----T------GTT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 2
s Mellivora_capensis.MelCap_flattened_line_69365             11582  8 +     13704 GTT-A----T------ATA
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 2
s Meriones_unguiculatus.MerUng_scaffold_7390                 34524  7 +    140813 G-T-A----T------ATT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 2
s Mesocricetus_auratus.KB708134.1                         12183995  7 -  29670104 G-C-A----T------GTT
i Mesocricetus_auratus.KB708134.1                        C 0 I 2
s Mesoplodon_bidens.MesBid_scaffold_108144                    4512  7 +     10310 G-T-G----T------ATT
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 I 2
s Micronycteris_hirsuta.MicHir_scaffold_52381                17103  4 -     19307 ---------T------ATT
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 2 I 2
s Microtus_ochrogaster.CM001695.1                         11262272  7 -  27267610 G-T-A----T------CTT
i Microtus_ochrogaster.CM001695.1                        C 0 I 2
s Miopithecus_ogouensis.k141_534055                          11896  7 -     28506 G-T-A----T------ATT
i Miopithecus_ogouensis.k141_534055                      C 0 I 2
s Mirounga_angustirostris.MirAng_flattened_line_93702         7188  8 -      8324 GCt-a----t------ata
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 2
s Monodon_monoceros.MonMon_M_scaffold_103                    28021  7 -    437263 G-T-G----T------ATT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 2
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142898  4 -    366855 ---------T------ATT
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 5 I 2
s Moschus_moschiferus.MosMos_scaffold_13123                   1919  7 +     82753 g-c-a----t------gct
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 2
s Mus_caroli.LT608237.1                                   84362903  7 - 120012414 G-T-A----T------ATT
i Mus_caroli.LT608237.1                                  C 0 I 2
s Mus_musculus.chr8                                       87652402  7 - 129401213 G-T-A----T------ATT
i Mus_musculus.chr8                                      C 0 I 2
s Mus_pahari.LT608297.1                                   31357136  7 -  89631738 G-T-A----T------ATT
i Mus_pahari.LT608297.1                                  C 0 I 2
s Mus_spretus.CM004101.1                                  90754893  7 - 130317789 G-T-A----T------ATT
i Mus_spretus.CM004101.1                                 C 0 I 2
s Mustela_putorius.JH418006.1                               302977  8 -  14710649 GTT-A----T------ATA
i Mustela_putorius.JH418006.1                            C 0 I 2
s Myocastor_coypus.MyoCoy_scaffold_10123                     72350  7 -     80779 A-T-A----T------GTA
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 3 I 2
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190533  3 +    196477 C-A-A--------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2036708  7 -   3037898 G-C-A----T------ATT
i Nannospalax_galili.KL204047.1                          C 0 I 2
s Nasalis_larvatus.k141_413338                               17950  7 +     21681 G-T-A----T------ATT
i Nasalis_larvatus.k141_413338                           C 0 I 2
s Neomonachus_schauinslandi.NINY01007730.1                20308781  8 +  31847680 GCt-a----t------ata
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 2
s Neophocaena_asiaeorientalis.KZ687982.1                   5866990  7 +   7148211 G-T-G----T------ATT
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 2
s Noctilio_leporinus.NocLep_scaffold_251                    759103  4 +    783361 ---------T------ACT
i Noctilio_leporinus.NocLep_scaffold_251                 I 2 I 2
s Ochotona_princeps.JH802162.1                             1365424  3 +   3988456 ----------------ATC
i Ochotona_princeps.JH802162.1                           C 0 I 2
s Odobenus_rosmarus.KB229312.1                              507923  8 -   2017862 GCt-a----t------ata
i Odobenus_rosmarus.KB229312.1                           C 0 I 2
s Okapia_johnstoni.LVCL01S0005463.1                          77751  7 -    150152 a-c-a----t------gct
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 2
s Ondatra_zibethicus.OndZib_scaffold_46174                   26911  7 +     28053 G-T-A----T------GTT
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 2
s Onychomys_torridus.OnyTor_scaffold_2986                    81924  7 +    102263 A-T-A----T------GTT
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 2
s Orcinus_orca.KB316932.1                                  2782899  7 -  10937097 G-T-G----T------ATT
i Orcinus_orca.KB316932.1                                C 0 I 2
s Oryctolagus_cuniculus.CM000791.1                        67148882  3 + 174332312 ----------------ATC
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 2
s Ovis_aries.CM001607.2                                   17587027  7 +  44047080 g-c-a----t------gct
i Ovis_aries.CM001607.2                                  C 0 I 2
s Ovis_canadensis.OviCan_scaffold_2572                      175012  7 -    191736 g-c-a----t------gct
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 I 2
s Pan_paniscus.KQ411613.1                                    46900  7 +     80009 G-t-a----t------att
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189145775  7 + 189151597 G-t-a----t------att
i Pan_troglodytes.CM009242.2                             I 8 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152380  7 +    230217 G-T-A----T------ATT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 2
s Panthera_pardus.KV860321.1                                265589  7 +  18783137 g-t-a----t------gtt
i Panthera_pardus.KV860321.1                             C 0 I 2
s Panthera_tigris.KE722367.1                               4722469  7 -   8748460 G-T-A----T------GTT
i Panthera_tigris.KE722367.1                             C 0 I 2
s Pantholops_hodgsonii.KE114653.1                          1265916  7 -   2937107 g-c-a----t------gct
i Pantholops_hodgsonii.KE114653.1                        C 0 I 2
s Papio_anubis.CM001495.2                                183446023  7 + 183742232 g-t-a----t------att
i Papio_anubis.CM001495.2                                C 0 I 2
s Papio_cynocephalus.k141_4307930                             9673  7 +     20448 G-T-A----T------ATT
i Papio_cynocephalus.k141_4307930                        C 0 I 2
s Papio_hamadryas.Contig39                                20566481  7 +  20919399 G-T-A----T------ATT
i Papio_hamadryas.Contig39                               C 0 I 2
s Papio_kindae.k141_1936966                                   8413  7 +     41871 G-T-A----T------ATT
i Papio_kindae.k141_1936966                              C 0 I 2
s Papio_papio.k141_802527                                    11706  7 +     27711 G-T-A----T------ATT
i Papio_papio.k141_802527                                C 0 I 2
s Papio_ursinus.k141_5274964                                  2705  7 -     11374 G-T-A----T------ATT
i Papio_ursinus.k141_5274964                             C 0 I 2
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13876  7 -     78924 G-T-A----A------ATT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 2
s Peromyscus_maniculatus.KI615324.1                       18196552  7 -  18517816 A-T-A----T------GTT
i Peromyscus_maniculatus.KI615324.1                      C 0 I 2
s Petromus_typicus.PetTyp_scaffold_42190                     29300  6 -     29689 --C-A----T------ATG
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 I 2
s Phocoena_phocoena.PhoPho_flattened_line_24159               9944  7 +     63832 G-T-G----T------ATT
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 2
s Piliocolobus_badius.k141_1142974                            1024  7 +     68526 G-T-A----T------ATT
i Piliocolobus_badius.k141_1142974                       C 0 I 1
s Piliocolobus_gordonorum.k141_381342                        41170  7 +     89929 G-T-A----T------ATT
i Piliocolobus_gordonorum.k141_381342                    C 0 I 1
s Piliocolobus_kirkii.k141_448987                            42584  7 +     51399 G-T-A----T------ATT
i Piliocolobus_kirkii.k141_448987                        C 0 I 1
s Piliocolobus_tephrosceles.PDMG02000141.1                14298821  7 -  14605196 g-t-a----t------att
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 1
s Pithecia_albicans.k141_1476471                              4439  7 +     26961 G-T-A----T------ATT
i Pithecia_albicans.k141_1476471                         C 0 I 4
s Pithecia_chrysocephala.k141_839575                           584  7 +     23417 G-T-A----T------ATT
i Pithecia_chrysocephala.k141_839575                     C 0 I 4
s Pithecia_hirsuta.k141_305604                                4431  7 +     29694 G-T-A----T------ATT
i Pithecia_hirsuta.k141_305604                           C 0 I 4
s Pithecia_mittermeieri.k141_446740                          29457  7 +     52772 G-T-A----T------ATT
i Pithecia_mittermeieri.k141_446740                      C 0 I 4
s Pithecia_pissinattii.k141_1824269                           4453  7 +     26198 G-T-A----T------ATT
i Pithecia_pissinattii.k141_1824269                      C 0 I 4
s Pithecia_pithecia.tarseq_165                             3941002  7 +   4542175 G-T-A----T------ATT
i Pithecia_pithecia.tarseq_165                           C 0 I 4
s Pithecia_vanzolinii.k141_1697688                            4417  7 -     23490 G-T-A----T------ATT
i Pithecia_vanzolinii.k141_1697688                       C 0 I 4
s Plecturocebus_bernhardi.k141_2549090                        8680  7 -     39866 G-T-A----T------ATT
i Plecturocebus_bernhardi.k141_2549090                   C 0 I 4
s Plecturocebus_brunneus.k141_1495506                        17846  7 +     34906 G-T-A----T------ATT
i Plecturocebus_brunneus.k141_1495506                    C 0 I 4
s Plecturocebus_caligatus.k141_1382851                       22110  7 +     87950 G-T-A----T------ATT
i Plecturocebus_caligatus.k141_1382851                   C 0 I 4
s Plecturocebus_cinerascens.k141_1164729                     22937  7 +     88961 G-T-A----T------ATT
i Plecturocebus_cinerascens.k141_1164729                 C 0 I 4
s Plecturocebus_cupreus.k141_2351393                          8608  7 +     39403 G-T-A----T------ATT
i Plecturocebus_cupreus.k141_2351393                     C 0 I 4
s Plecturocebus_dubius.k141_1058799                          22389  7 -     87928 G-T-A----T------ATT
i Plecturocebus_dubius.k141_1058799                      C 0 I 4
s Plecturocebus_grovesi.k141_2013005                         29348  7 +     60166 G-T-A----T------ATT
i Plecturocebus_grovesi.k141_2013005                     C 0 I 4
s Plecturocebus_hoffmannsi.k141_3303950                      29545  7 +     67232 G-T-A----T------ATT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 I 4
s Plecturocebus_miltoni.k141_349282                          25018  7 +     90634 G-T-A----T------ATT
i Plecturocebus_miltoni.k141_349282                      C 0 I 4
s Plecturocebus_moloch.k141_1031110                          22390  7 -     89403 G-T-A----T------ATT
i Plecturocebus_moloch.k141_1031110                      C 0 I 4
s Pongo_abelii.CM009266.2                                189133919  7 + 189387572 G-T-A----T------ATT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9573528  7 +   9816681 G-T-A----T------ATT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76134  7 -     81375 G-T-A----T------ATT
i Presbytis_comata.k141_677006                           C 0 I 2
s Presbytis_mitrata.k141_1087752                              7951  7 +     19060 G-T-A----T------ATT
i Presbytis_mitrata.k141_1087752                         C 0 I 2
s Psammomys_obesus.NESX01036370.1                            12165  7 -     21651 G-T-A----T------ATT
i Psammomys_obesus.NESX01036370.1                        C 0 I 2
s Pteronotus_parnellii.KE909381.1                            16386  4 -     21811 ---------t------ctt
i Pteronotus_parnellii.KE909381.1                        I 5 I 2
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41784  8 +     42204 GTT-A----T------ATA
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 2
s Puma_concolor.QAVW01001104.1                            20275539  7 -  38429054 g-t-a----t------att
i Puma_concolor.QAVW01001104.1                           C 0 I 2
s Pygathrix_cinerea.k141_1153803                             17935  7 -     91421 G-T-A----T------ATT
i Pygathrix_cinerea.k141_1153803                         C 0 I 2
s Pygathrix_nigripes_b.ctg100                                 7612059  7 +   7812017 G-T-A----T------ATT
i Pygathrix_nigripes_b.ctg100                               C 0 I 2
s Pygathrix_nigripes_a.k141_215492                             17966  7 -     72585 G-T-A----T------ATT
i Pygathrix_nigripes_a.k141_215492                         C 0 I 2
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6497  7 +     55207 a-c-a----t------gct
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 2
s Rhinolophus_sinicus.LVEH01000134.1                        368231  7 -   3329780 g-t-A----T------CTT
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 2
s Rhinopithecus_bieti.k119_217274                             9638  7 -     11128 G-T-A----T------ATT
i Rhinopithecus_bieti.k119_217274                        C 0 I 2
s Rhinopithecus_roxellana.NC_044550.1                     91239002  7 - 195417433 g-t-a----t------att
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 2
s Rhinopithecus_strykeri.ctg102                            7674649  7 +   7961872 G-T-A----T------ATT
i Rhinopithecus_strykeri.ctg102                          C 0 I 2
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89073  5 -     96226 A-TTT----T---------
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 2
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154425  5 -    313613 ----T----T------ATT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 2
s Semnopithecus_entellus.k141_1672505                         2808  7 -     12572 G-T-A----T------ATT
i Semnopithecus_entellus.k141_1672505                    C 0 I 2
s Semnopithecus_hypoleucos.k141_1615806                      29660  7 +     39453 G-T-A----T------ATT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 I 2
s Semnopithecus_johnii.k141_670120                           10168  7 +     27826 G-T-A----T------ATT
i Semnopithecus_johnii.k141_670120                       C 0 I 2
s Semnopithecus_priam.k141_638794                             9704  7 -     19483 G-T-A----T------ATT
i Semnopithecus_priam.k141_638794                        C 0 I 2
s Semnopithecus_schistaceus.k141_1572284                      3007  7 -     12762 G-T-A----T------ATT
i Semnopithecus_schistaceus.k141_1572284                 C 0 I 2
s Semnopithecus_vetulus.k141_910252                           2855  7 +     13763 G-T-A----T------ATT
i Semnopithecus_vetulus.k141_910252                      C 0 I 2
s Sigmodon_hispidus.SigHis_scaffold_42075                     2076  7 -     30804 G-T-A----T------GCT
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 I 2
s Solenodon_paradoxus.SolPar_flattened_line_126               4964  6 +   1910179 --C-A----T------ATT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 2
s Sorex_araneus.JH798187.1                                13652231  4 -  18376816 ---------t------att
i Sorex_araneus.JH798187.1                               C 0 I 2
s Spermophilus_dauricus.KZ294078.1                         1955317  7 -   3870691 a-t-g----t------atc
i Spermophilus_dauricus.KZ294078.1                       C 0 I 2
s Spilogale_gracilis.SpiGra_flattened_line_13525             32258  8 +     97271 GCT-A----T------ATA
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 2
s Suricata_suricatta.SurSur_flattened_line_6629              19550  7 -    196729 G-T-A----T------ATT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 2
s Sus_scrofa.CM000828.4                                    6812363  7 +  69701581 a-t-g----t------att
i Sus_scrofa.CM000828.4                                  C 0 I 2
s Tadarida_brasiliensis.TadBra_scaffold_25820                12056  4 +     41958 ---------T------ATT
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 6 I 2
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73918  3 +    116680 C-A-A--------------
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Theropithecus_gelada.CM009954.1                        186431329  7 + 186847797 g-t-a----t------att
i Theropithecus_gelada.CM009954.1                        C 0 I 2
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106592  6 +    114563 --T-A----T------ATG
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 2
s Tonatia_saurophila.TonSau_scaffold_294                     82444  4 +    610378 ---------T------GCT
i Tonatia_saurophila.TonSau_scaffold_294                 I 2 I 2
s Tolypeutes_matacus.TolMat_scaffold_228639                   7640  3 +      8208 C-A-A--------------
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Trachypithecus_auratus.k141_722599                         13753  7 -     20410 G-T-A----T------ATT
i Trachypithecus_auratus.k141_722599                     C 0 I 2
s Trachypithecus_crepusculus.k141_582567                      2869  7 -     12674 G-T-A----T------ATT
i Trachypithecus_crepusculus.k141_582567                 C 0 I 2
s Trachypithecus_cristatus.k141_580354                       13861  7 +     19930 G-T-A----T------ATT
i Trachypithecus_cristatus.k141_580354                   C 0 I 2
s Trachypithecus_francoisi.k141_1412647                      10256  7 -     19997 G-T-A----T------ATT
i Trachypithecus_francoisi.k141_1412647                  C 0 I 2
s Trachypithecus_geei.k141_277701                            50401  7 -     60166 G-T-A----T------ATT
i Trachypithecus_geei.k141_277701                        C 0 I 2
s Trachypithecus_germaini.k141_912491                        17864  7 -     27529 G-T-A----T------ATT
i Trachypithecus_germaini.k141_912491                    C 0 I 2
s Trachypithecus_hatinhensis.k141_143409                     17814  7 -     18194 G-T-A----T------ATT
i Trachypithecus_hatinhensis.k141_143409                 C 0 I 2
s Trachypithecus_laotum.k141_907409                          11526  7 -     21137 G-T-A----T------ATT
i Trachypithecus_laotum.k141_907409                      C 0 I 1
s Trachypithecus_leucocephalus.k141_587342                   10226  7 -     10723 G-T-A----T------ATT
i Trachypithecus_leucocephalus.k141_587342               C 0 I 2
s Trachypithecus_melamera.k141_434728                         9403  7 +      9834 G-T-A----T------ATT
i Trachypithecus_melamera.k141_434728                    C 0 I 2
s Trachypithecus_obscurus.k141_190785                        27726  7 +     32220 G-T-A----T------ATT
i Trachypithecus_obscurus.k141_190785                    C 0 I 2
s Trachypithecus_phayrei.ctg124                            5941823  7 +   6242583 G-T-A----T------ATT
i Trachypithecus_phayrei.ctg124                          C 0 I 2
s Trachypithecus_pileatus.k141_2007326                       11074  7 +     20839 G-T-A----T------ATT
i Trachypithecus_pileatus.k141_2007326                   C 0 I 2
s Tursiops_truncatus.MRVK01000835.1                       15739141  7 +  33153633 G-T-G----T------ATT
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 2
s Uropsilus_gracilis.UroGra_scaffold_12083                   54524  7 -     77625 A-T-T----T------ATT
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 2
s Ursus_maritimus.KK499267.1                               4851641  8 -   5085361 GCT-C----T------ATA
i Ursus_maritimus.KK499267.1                             C 0 I 2
s Vicugna_pacos.KN270157.1                                 5373014  7 -   5488506 g-t-g----t------att
i Vicugna_pacos.KN270157.1                               C 0 I 2
s Xerus_inauris.XerIna_scaffold_2302                          2320  7 +    224448 A-T-A----T------ATC
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 2
s Zapus_hudsonius.ZapHud_scaffold_11398                      16071 11 +     63895 A-T-TTTGTT------AGT
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 3
e Lagothrix_lagothricha.k141_1005387                         15287  0 -     38430 C
e Ateles_paniscus.k141_457735                                21129  0 +     72325 C
e Ateles_marginatus.k141_803263                              13240  0 -     40414 C
e Ateles_geoffroyi_a.k141_833924                                8856  0 -     89868 C
e Ateles_chamek.k141_1806455                                 27084  0 -     30947 C
e Ateles_belzebuth.k141_445860                               44280  0 -     48001 C
e Ateles_geoffroyi_b.tarseq_1536                             21209484  0 -  21539123 C
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Alouatta_seniculus.k141_117119                             16471  0 +     50774 C
e Alouatta_puruensis.k141_362188                              2019  0 +      5663 C
e Alouatta_palliata.k141_2135620                              5287  0 +     47717 C
e Alouatta_nigerrima.k141_1929159                             1292  0 +     30492 C
e Alouatta_macconnelli.k141_918386                            2334  0 -      9457 C
e Alouatta_juara.k141_1302312                                 1197 57 +     27940 I
e Alouatta_discolor.k141_566626                              12779  0 +     28687 C
e Alouatta_caraya.k141_1701091                                2327  0 -     36483 C
e Alouatta_belzebul.k141_3560514                              9218  0 +     51355 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 12422 320 -     43706 T
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Tupaia_chinensis.KB320699.1                              2157208  1 +   4065304 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_40725                     822 276 +     27266 I
e Tarsius_wallacei.k141_254427                                1877  3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080  3 +     70052 I
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Rattus_norvegicus.chr16                                 53571770 803 +  90668790 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Pteropus_alecto.KB030862.1                              22978014  7 +  28871421 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             2992 11 +     22620 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Otocyon_megalotis.JAEUCK010005147.1                       463984 325 -    559221 T
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9150892 182 -   9404916 T
e Myotis_myotis.MyoMyo_scaffold_281845                        1211 12 +      1835 I
e Myotis_lucifugus.GL429869.1                              3905059 12 -   4330536 I
e Myotis_davidii.KB100139.1                                1588961 10 -   6019432 I
e Myotis_brandtii.KE162005.1                                279962 1755 -  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           8065 12 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             35221  4 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1851541  4 +   8254450 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Lycaon_pictus.CM007581.1                                17956957 950 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Lasiurus_borealis.LasBor_scaffold_50988                    16384 22 +     29960 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2146969 11 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Crocidura_indochinensis.CroInd_scaffold_37019               4143  0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Cephalopachus_bancanus.k141_1423433                         6085  3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Carlito_syrichta.NW_007259797.1                           156587  3 -    496798 I
e Canis_lupus_orion.HG994398.1                            18502019 950 +  63665305 I
e Canis_lupus_familiaris.chr16                            17960717 950 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9036246 952 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     1546 950 -     43241 I
e CanFam4.chr16                                           17800803 952 -  60362399 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       9564 1 +     62944 A
s Allenopithecus_nigroviridis.k141_3361533                   17460 1 -     52922 T
i Allenopithecus_nigroviridis.k141_3361533               I 2 C 0
s Allochrocebus_lhoesti.k141_4309873                         17388 1 -     28001 T
i Allochrocebus_lhoesti.k141_4309873                     I 2 C 0
s Allochrocebus_solatus.k141_166128                           8738 1 -     12518 T
i Allochrocebus_solatus.k141_166128                      I 2 C 0
s Cercocebus_atys.KQ010504.1                               4478417 1 +   4669795 t
i Cercocebus_atys.KQ010504.1                             I 2 C 0
s Cercocebus_chrysogaster.k141_1540778                        2911 1 +     17872 T
i Cercocebus_chrysogaster.k141_1540778                   I 2 C 0
s Cercocebus_lunulatus.k141_3342297                           3506 1 -     14043 T
i Cercocebus_lunulatus.k141_3342297                      I 2 C 0
s Cercocebus_torquatus.k141_3057011                          11601 1 +     27781 T
i Cercocebus_torquatus.k141_3057011                      I 2 C 0
s Cercopithecus_ascanius.k141_1024104                        11748 1 -     20310 T
i Cercopithecus_ascanius.k141_1024104                    I 2 C 0
s Cercopithecus_cephus.k141_1078548                          14728 1 +     29689 T
i Cercopithecus_cephus.k141_1078548                      I 2 C 0
s Cercopithecus_diana.k141_1150327                            9484 1 -     20078 T
i Cercopithecus_diana.k141_1150327                       I 2 C 0
s Cercopithecus_lowei.k141_1854285                            6268 1 -     17152 T
i Cercopithecus_lowei.k141_1854285                       I 2 C 0
s Cercopithecus_albogularis.ctg5                                38825998 1 +  39242232 T
i Cercopithecus_albogularis.ctg5                               I 2 C 0
s Cercopithecus_mona.ctg39                                21225502 1 -  21565898 T
i Cercopithecus_mona.ctg39                               I 2 C 0
s Cercopithecus_neglectus.k141_2526306                       42622 1 -     53127 T
i Cercopithecus_neglectus.k141_2526306                   I 2 C 0
s Cercopithecus_nictitans.k141_1119862                        2871 1 +     13442 T
i Cercopithecus_nictitans.k141_1119862                   I 2 C 0
s Cercopithecus_petaurista.k141_807961                       17417 1 -     27947 T
i Cercopithecus_petaurista.k141_807961                   I 2 C 0
s Cercopithecus_pogonias.k141_822820                         17397 1 +     17596 T
i Cercopithecus_pogonias.k141_822820                     I 2 N 0
s Chlorocebus_aethiops.ctg25                              18431321 1 -  18827391 T
i Chlorocebus_aethiops.ctg25                             I 2 C 0
s Chlorocebus_pygerythrus.k141_1025673                       17827 1 -     50209 T
i Chlorocebus_pygerythrus.k141_1025673                   I 2 C 0
s Chlorocebus_sabaeus.CM001947.1                         135424826 1 + 135778131 t
i Chlorocebus_sabaeus.CM001947.1                         I 2 C 0
s Erythrocebus_patas.Contig38                             21207994 1 -  21539334 T
i Erythrocebus_patas.Contig38                            I 2 C 0
s Gorilla_beringei.k141_3596273                              18805 1 -     32273 A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186340942 1 + 186649187 a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hoolock_leuconedys.ctg274                                    437607 1 +    630532 A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Lophocebus_aterrimus.ctg367                              1439959 1 +   1826925 T
i Lophocebus_aterrimus.ctg367                            I 2 C 0
s Macaca_arctoides.k141_2326796                               9768 1 +     40492 T
i Macaca_arctoides.k141_2326796                          I 2 C 0
s Macaca_assamensis.Contig5                               59679022 1 +  60120075 T
i Macaca_assamensis.Contig5                              I 2 C 0
s Macaca_cyclopis.k119_18836                                 15540 1 -     26193 T
i Macaca_cyclopis.k119_18836                             I 2 C 0
s Macaca_fascicularis.k141_814140                            83316 1 -    114318 T
i Macaca_fascicularis.k141_814140                        I 2 C 0
s Macaca_fuscata.k119_255327                                  9007 1 -     23192 T
i Macaca_fuscata.k119_255327                             I 2 C 0
s Macaca_leonina.k141_3550399                                18471 1 -     29190 T
i Macaca_leonina.k141_3550399                            I 2 C 0
s Macaca_maura.k141_2733130                                  27049 1 +     37952 T
i Macaca_maura.k141_2733130                              I 2 C 0
s Macaca_mulatta.NC_041758.1                             186842128 1 + 187317192 t
i Macaca_mulatta.NC_041758.1                             I 2 C 0
s Macaca_nemestrina.KQ007038.1                            25460704 1 -  25927173 t
i Macaca_nemestrina.KQ007038.1                           I 2 C 0
s Macaca_nigra.k141_1655396                                  82905 1 +     89720 T
i Macaca_nigra.k141_1655396                              I 2 C 0
s Macaca_radiata.k141_3680011                                 9898 1 +     20474 T
i Macaca_radiata.k141_3680011                            I 2 C 0
s Macaca_siberu.k141_635500                                   9695 1 -     14993 T
i Macaca_siberu.k141_635500                              I 2 C 0
s Macaca_silenus.Contig273                                  332557 1 -    668171 T
i Macaca_silenus.Contig273                               I 2 C 0
s Macaca_thibetana.k99_256239                                 8007 1 -     24072 T
i Macaca_thibetana.k99_256239                            I 2 C 0
s Macaca_tonkeana.k141_1498238                               28638 1 -     45290 T
i Macaca_tonkeana.k141_1498238                           I 2 C 0
s Mandrillus_leucophaeus.scaffold280                      23940230 1 -  24302211 T
i Mandrillus_leucophaeus.scaffold280                     I 2 C 0
s Mandrillus_sphinx.Contig270                               354342 1 +    752769 T
i Mandrillus_sphinx.Contig270                            I 2 C 0
s Miopithecus_ogouensis.k141_534055                          11905 1 -     28506 T
i Miopithecus_ogouensis.k141_534055                      I 2 C 0
s Nasalis_larvatus.k141_413338                               17959 1 +     21681 T
i Nasalis_larvatus.k141_413338                           I 2 C 0
s Pan_paniscus.KQ411613.1                                    46907 1 +     80009 a
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189145782 1 + 189151597 a
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                183446032 1 + 183742232 t
i Papio_anubis.CM001495.2                                I 2 C 0
s Papio_cynocephalus.k141_4307930                             9682 1 +     20448 T
i Papio_cynocephalus.k141_4307930                        I 2 C 0
s Papio_hamadryas.Contig39                                20566490 1 +  20919399 T
i Papio_hamadryas.Contig39                               I 2 C 0
s Papio_kindae.k141_1936966                                   8422 1 +     41871 T
i Papio_kindae.k141_1936966                              I 2 C 0
s Papio_papio.k141_802527                                    11715 1 +     27711 T
i Papio_papio.k141_802527                                I 2 C 0
s Papio_ursinus.k141_5274964                                  2714 1 -     11374 T
i Papio_ursinus.k141_5274964                             I 2 C 0
s Pongo_abelii.CM009266.2                                189133926 1 + 189387572 a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9573535 1 +   9816681 A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76143 1 -     81375 T
i Presbytis_comata.k141_677006                           I 2 C 0
s Presbytis_mitrata.k141_1087752                              7960 1 +     19060 T
i Presbytis_mitrata.k141_1087752                         I 2 C 0
s Pygathrix_cinerea.k141_1153803                             17944 1 -     91421 T
i Pygathrix_cinerea.k141_1153803                         I 2 C 0
s Pygathrix_nigripes_b.ctg100                                 7612068 1 +   7812017 T
i Pygathrix_nigripes_b.ctg100                               I 2 C 0
s Pygathrix_nigripes_a.k141_215492                             17975 1 -     72585 T
i Pygathrix_nigripes_a.k141_215492                         I 2 C 0
s Rhinopithecus_bieti.k119_217274                             9647 1 -     11128 T
i Rhinopithecus_bieti.k119_217274                        I 2 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239011 1 - 195417433 t
i Rhinopithecus_roxellana.NC_044550.1                    I 2 C 0
s Rhinopithecus_strykeri.ctg102                            7674658 1 +   7961872 T
i Rhinopithecus_strykeri.ctg102                          I 2 C 0
s Semnopithecus_entellus.k141_1672505                         2817 1 -     12572 T
i Semnopithecus_entellus.k141_1672505                    I 2 C 0
s Semnopithecus_hypoleucos.k141_1615806                      29669 1 +     39453 T
i Semnopithecus_hypoleucos.k141_1615806                  I 2 C 0
s Semnopithecus_johnii.k141_670120                           10177 1 +     27826 T
i Semnopithecus_johnii.k141_670120                       I 2 C 0
s Semnopithecus_priam.k141_638794                             9713 1 -     19483 T
i Semnopithecus_priam.k141_638794                        I 2 C 0
s Semnopithecus_schistaceus.k141_1572284                      3016 1 -     12762 T
i Semnopithecus_schistaceus.k141_1572284                 I 2 C 0
s Semnopithecus_vetulus.k141_910252                           2864 1 +     13763 T
i Semnopithecus_vetulus.k141_910252                      I 2 C 0
s Theropithecus_gelada.CM009954.1                        186431338 1 + 186847797 t
i Theropithecus_gelada.CM009954.1                        I 2 C 0
s Trachypithecus_auratus.k141_722599                         13762 1 -     20410 T
i Trachypithecus_auratus.k141_722599                     I 2 C 0
s Trachypithecus_crepusculus.k141_582567                      2878 1 -     12674 T
i Trachypithecus_crepusculus.k141_582567                 I 2 C 0
s Trachypithecus_cristatus.k141_580354                       13870 1 +     19930 T
i Trachypithecus_cristatus.k141_580354                   I 2 C 0
s Trachypithecus_francoisi.k141_1412647                      10265 1 -     19997 T
i Trachypithecus_francoisi.k141_1412647                  I 2 C 0
s Trachypithecus_geei.k141_277701                            50410 1 -     60166 T
i Trachypithecus_geei.k141_277701                        I 2 C 0
s Trachypithecus_germaini.k141_912491                        17873 1 -     27529 T
i Trachypithecus_germaini.k141_912491                    I 2 C 0
s Trachypithecus_hatinhensis.k141_143409                     17823 1 -     18194 T
i Trachypithecus_hatinhensis.k141_143409                 I 2 C 0
s Trachypithecus_leucocephalus.k141_587342                   10235 1 -     10723 T
i Trachypithecus_leucocephalus.k141_587342               I 2 C 0
s Trachypithecus_melamera.k141_434728                         9412 1 +      9834 T
i Trachypithecus_melamera.k141_434728                    I 2 C 0
s Trachypithecus_obscurus.k141_190785                        27735 1 +     32220 T
i Trachypithecus_obscurus.k141_190785                    I 2 C 0
s Trachypithecus_phayrei.ctg124                            5941832 1 +   6242583 T
i Trachypithecus_phayrei.ctg124                          I 2 C 0
s Trachypithecus_pileatus.k141_2007326                       11083 1 +     20839 T
i Trachypithecus_pileatus.k141_2007326                   I 2 C 0
e Cheracebus_torquatus.k141_1170026                          62589 4 +     76511 I
e Cheracebus_regulus.k141_471822                            158114 4 -    216457 I
e Cheracebus_lugens.k141_1393925                               547 4 +     17877 I
e Cheracebus_lucifer.k141_49986                                671 4 -     17098 I
e Plecturocebus_moloch.k141_1031110                          22397 4 -     89403 I
e Plecturocebus_miltoni.k141_349282                          25025 4 +     90634 I
e Plecturocebus_hoffmannsi.k141_3303950                      29552 4 +     67232 I
e Plecturocebus_grovesi.k141_2013005                         29355 4 +     60166 I
e Plecturocebus_dubius.k141_1058799                          22396 4 -     87928 I
e Plecturocebus_cupreus.k141_2351393                          8615 4 +     39403 I
e Plecturocebus_cinerascens.k141_1164729                     22944 4 +     88961 I
e Plecturocebus_caligatus.k141_1382851                       22117 4 +     87950 I
e Plecturocebus_brunneus.k141_1495506                        17853 4 +     34906 I
e Plecturocebus_bernhardi.k141_2549090                        8687 4 -     39866 I
e Pithecia_vanzolinii.k141_1697688                            4424 4 -     23490 I
e Pithecia_pithecia.tarseq_165                             3941009 4 +   4542175 I
e Pithecia_pissinattii.k141_1824269                           4460 4 +     26198 I
e Pithecia_mittermeieri.k141_446740                          29464 4 +     52772 I
e Pithecia_hirsuta.k141_305604                                4438 4 +     29694 I
e Pithecia_chrysocephala.k141_839575                           591 4 +     23417 I
e Pithecia_albicans.k141_1476471                              4446 4 +     26961 I
e Lagothrix_lagothricha.k141_1005387                         15287 0 -     38430 C
e Chiropotes_sagulatus.k141_1421488                          30985 4 -     50570 I
e Chiropotes_israelita.k141_747660                           99177 4 +    146308 I
e Cacajao_melanocephalus.k141_619699                         54841 4 -    119600 I
e Cacajao_hosomi.k141_81245                                  30740 4 -     95584 I
e Cacajao_calvus.k141_5142                                   61560 4 +     81800 I
e Cacajao_ayresi.k141_552049                                102055 4 -    122966 I
e Ateles_paniscus.k141_457735                                21129 0 +     72325 C
e Ateles_marginatus.k141_803263                              13240 0 -     40414 C
e Ateles_geoffroyi_a.k141_833924                                8856 0 -     89868 C
e Ateles_chamek.k141_1806455                                 27084 0 -     30947 C
e Ateles_belzebuth.k141_445860                               44280 0 -     48001 C
e Ateles_geoffroyi_b.tarseq_1536                             21209484 0 -  21539123 C
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202 0 +      8798 C
e Galago_senegalensis.k141_631886                             7400 0 +     11339 C
e Galago_moholi.ctg2040                                     429710 0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964 2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Alouatta_seniculus.k141_117119                             16471 0 +     50774 C
e Alouatta_puruensis.k141_362188                              2019 0 +      5663 C
e Alouatta_palliata.k141_2135620                              5287 0 +     47717 C
e Alouatta_nigerrima.k141_1929159                             1292 0 +     30492 C
e Alouatta_macconnelli.k141_918386                            2334 0 -      9457 C
e Alouatta_juara.k141_1302312                                 1197 57 +     27940 I
e Alouatta_discolor.k141_566626                              12779 0 +     28687 C
e Alouatta_caraya.k141_1701091                                2327 0 -     36483 C
e Alouatta_belzebul.k141_3560514                              9218 0 +     51355 C
e Mus_pahari.LT608297.1                                   31357143 2 -  89631738 I
e Mus_spretus.CM004101.1                                  90754900 2 - 130317789 I
e Mus_musculus.chr8                                       87652409 2 - 129401213 I
e Mus_caroli.LT608237.1                                   84362910 2 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445 0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734 0 -     33856 C
e Perodicticus_potto.k141_1186926                              597 0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219 0 -      3244 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      16082 3 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Xerus_inauris.XerIna_scaffold_2302                          2327 2 +    224448 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 12422 320 -     43706 T
e Vicugna_pacos.KN270157.1                                 5373021 2 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851649 2 -   5085361 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   54531 2 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15739148 2 +  33153633 I
e Tupaia_chinensis.KB320699.1                              2157208 1 +   4065304 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_40725                     822 276 +     27266 I
e Trachypithecus_laotum.k141_907409                          11533 1 -     21137 I
e Tonatia_saurophila.TonSau_scaffold_294                     82448 2 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   7643 0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              106598 2 +    114563 I
e Tarsius_wallacei.k141_254427                                1877 3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080 3 +     70052 I
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73921 0 +    116680 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                12060 2 +     41958 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6812370 2 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629              19557 2 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             32266 2 +     97271 I
e Spermophilus_dauricus.KZ294078.1                         1955324 2 -   3870691 I
e Sorex_araneus.JH798187.1                                13652235 2 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4970 2 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_42075                     2083 2 -     30804 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    154430 2 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                89078 2 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        368238 2 -   3329780 I
e Rattus_norvegicus.chr16                                 53571770 803 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  6504 2 +     55207 I
e Puma_concolor.QAVW01001104.1                            20275546 2 -  38429054 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Pteropus_alecto.KB030862.1                              22978014 7 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         41792 2 +     42204 I
e Pteronotus_parnellii.KE909381.1                            16390 2 -     21811 I
e Psammomys_obesus.NESX01036370.1                            12172 2 -     21651 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             2992 11 +     22620 I
e Piliocolobus_tephrosceles.PDMG02000141.1                14298828 1 -  14605196 I
e Piliocolobus_kirkii.k141_448987                            42591 1 +     51399 I
e Piliocolobus_gordonorum.k141_381342                        41177 1 +     89929 I
e Piliocolobus_badius.k141_1142974                            1031 1 +     68526 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9951 2 +     63832 I
e Petromus_typicus.PetTyp_scaffold_42190                     29306 2 -     29689 I
e Peromyscus_maniculatus.KI615324.1                       18196559 2 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13883 2 -     78924 I
e Pantholops_hodgsonii.KE114653.1                          1265923 2 -   2937107 I
e Panthera_tigris.KE722367.1                               4722476 2 -   8748460 I
e Panthera_pardus.KV860321.1                                265596 2 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  152387 2 +    230217 I
e Ovis_canadensis.OviCan_scaffold_2572                      175019 2 -    191736 I
e Ovis_aries.CM001607.2                                   17587034 2 +  44047080 I
e Otocyon_megalotis.JAEUCK010005147.1                       463984 325 -    559221 T
e Oryctolagus_cuniculus.CM000791.1                        67148885 2 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Orcinus_orca.KB316932.1                                  2782906 2 -  10937097 I
e Onychomys_torridus.OnyTor_scaffold_2986                    81931 2 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   26918 2 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          77758 2 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              507931 2 -   2017862 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Ochotona_princeps.JH802162.1                             1365427 2 +   3988456 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869 0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414 0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947 0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9150892 182 -   9404916 T
e Noctilio_leporinus.NocLep_scaffold_251                    759107 2 +    783361 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5866997 2 +   7148211 I
e Neomonachus_schauinslandi.NINY01007730.1                20308789 2 +  31847680 I
e Nannospalax_galili.KL204047.1                            2036715 2 -   3037898 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190536 0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_281845                        1211 12 +      1835 I
e Myotis_lucifugus.GL429869.1                              3905059 12 -   4330536 I
e Myotis_davidii.KB100139.1                                1588961 10 -   6019432 I
e Myotis_brandtii.KE162005.1                                279962 1755 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     72357 2 -     80779 I
e Mustela_putorius.JH418006.1                               302985 2 -  14710649 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           8065 12 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398 7 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1926 2 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 142902 2 -    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                    28028 2 -    437263 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7196 2 -      8324 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             35221 4 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1851541 4 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11262279 2 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                17107 2 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    4519 2 +     10310 I
e Mesocricetus_auratus.KB708134.1                         12184002 2 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 34531 2 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365             11590 2 +     13704 I
e Megaderma_lyra.MegLyr_scaffold_4542                        14582 2 -    207569 I
e Marmota_marmota.CZRN01000018.1                          33104465 2 -  40650429 I
e Manis_pentadactyla.KN006162.1                              51502 2 -    317179 I
e Manis_javanica.JSZB01003497.1                              19484 2 +    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_8222                 91892 2 +     94391 I
e Lycaon_pictus.CM007581.1                                17956957 950 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268913 2 -    662738 I
e Lepus_americanus.LepAme_scaffold_107385                     7984 2 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044328 2 +   3914936 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Lasiurus_borealis.LasBor_scaffold_50988                    16384 22 +     29960 I
e Kogia_breviceps.KogBre_flattened_line_192630                3224 2 -      3359 I
e Jaculus_jaculus.JH725527.1                               8278341 3 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_48101               23849 2 +     23964 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7522178 2 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      84283 2 +    135385 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  46263 2 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_101188                330 2 +      9903 I
e Hipposideros_armiger.JXIK01000431.1                       111760 2 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20663393 2 +  22651954 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 19061 2 +     36099 I
e Helogale_parvula.HelPar_flattened_line_2585               243557 2 +    327341 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Graphiurus_murinus.GraMur_scaffold_10447                   33830 4 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            32155 2 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609847 2 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_108840               2694 2 -      9135 I
e Galagoides_demidoff.k141_1711393                            4689 0 +     41679 C
e Fukomys_damarensis.KN121974.1                             851610 2 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                 10779 2 -     36744 I
e Felis_catus_fca126.CM031415.1                           20197025 2 + 205367284 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Eubalaena_japonica.EubJap_flattened_line_31514             26263 2 -     44125 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           12310 2 +    133382 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2146969 11 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16330878 2 -  41312741 I
e Ellobius_talpinus.LOJH01081419.1                            2203 2 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          22297 2 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311884 2 +    607251 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    37588 2 +     67921 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8631358 2 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16812645 2 +  35494412 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64769 0 +   2246927 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  37046 2 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838281 2 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             29723 2 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_37019               4143 0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11668671 0 + 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_18520                 51781 2 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           1730 2 +     23735 I
e Condylura_cristata.JH655891.1                           17549283 2 -  53390261 I
e Colobus_polykomos.k141_906115                              39852 1 +     84244 I
e Colobus_guereza.LG01                                   199951576 1 + 200372422 I
e Colobus_angolensis.KN981557.1                            1913327 1 +   2368649 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1254099 2 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1750 0 -      8501 C
e Cercopithecus_roloway.k141_2581234                          3451 1 +     14005 I
e Cercopithecus_hamlyni.k141_187466                          17403 0 -     27936 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Cephalopachus_bancanus.k141_1423433                         6085 3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     94800 2 +    217609 I
e Castor_canadensis.CasCan_scaffold_2074                    138516 2 +    179628 I
e Carollia_perspicillata.CarPer_scaffold_92756                6348 2 -     11696 I
e Carlito_syrichta.NW_007259797.1                           156587 3 -    496798 I
e Capromys_pilorides.CapPil_scaffold_65020                    2175 2 -     12242 I
e Capra_hircus.CM004588.1                                 18061568 2 -  44709034 I
e Capra_aegagrus.CM003241.1                               18830848 2 +  46296322 I
e Canis_lupus_orion.HG994398.1                            18502019 950 +  63665305 I
e Canis_lupus_familiaris.chr16                            17960717 950 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9036246 952 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     1546 950 -     43241 I
e CanFam4.chr16                                           17800803 952 -  60362399 I
e Camelus_ferus.KB017975.1                                  404277 2 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2335978 2 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10003502 2 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2820230 2 +   4408762 I
e Bos_taurus.CM000203.6                                   18084554 2 +  45695690 I
e Bos_mutus.JH880303.1                                     1126476 2 -   1948126 I
e Bos_indicus.CM003047.1                                  20273916 2 +  48749331 I
e Bison_bison.KN261452.1                                    200731 2 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    27640 2 +     34529 I
e Balaenoptera_bonaerensis.DF707048.1                         3463 2 -     18090 I
e Balaenoptera_acutorostrata.KI537508.1                   15192998 2 +  23207421 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6008 2 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         538 0 +      5281 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      13865 2 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             99213 2 -    100397 I
e Anoura_caudifer.AnoCau_scaffold_1412                      186606 2 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          676734 2 -   2318259 I
e Allochrocebus_preussi.k141_1442296                          7885 0 -     18505 C
e Allactaga_bullata.AllBul_scaffold_9566                     75639 3 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             80921 2 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9511847 2 -  29979442 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     72516 2 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           828539 2 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                       9565 12 +     62944 AT--G--------TT--ATTAA---------A--------T
s Acinonyx_jubatus.LLWD01001279.1                           828541  5 -   1699592 -t--a--t-a---g---------------------------
i Acinonyx_jubatus.LLWD01001279.1                        I 2 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     72518 18 +     87051 ----T------AGTT--ATGAA---------A--TATATTC
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 2 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511849  4 -  29979442 ----agg------t---------------------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 2 C 0
s Ailurus_fulgens.LNAC01001112.1                             80923 10 -    347723 ----aggtgaaggt---------------------------
i Ailurus_fulgens.LNAC01001112.1                         I 2 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     75642 15 -     89534 -------------TT--ATTAA---------A--CATATTT
i Allactaga_bullata.AllBul_scaffold_9566                 I 3 C 0
s Allenopithecus_nigroviridis.k141_3361533                   17461 12 -     52922 AT--G--------TT--ATTAA---------A--------T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         17389 12 -     28001 AT--G--------TT--ATTAA---------A--------T
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          7885 11 -     18505 -T--G--------TT--ATTAA---------A--------T
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           8739 12 -     12518 AT--G--------TT--ATTAA---------A--------T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          676736  5 -   2318259 -g--t---ca---g---------------------------
i Ammotragus_lervia.NIVO01071767.1                       I 2 I 1
s Anoura_caudifer.AnoCau_scaffold_1412                      186608  4 +    412891 -T--A-------GT---------------------------
i Anoura_caudifer.AnoCau_scaffold_1412                   I 2 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             99215  5 -    100397 -g--t---ca---c---------------------------
i Antilocapra_americana.AntAmePen_scaffold_12469         I 2 I 1
s Aplodontia_rufa.AprRuf_scaffold_68852                      13867 13 +     20879 -T--A------AATT--ATTAT---------A--------T
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 2 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6010  4 +     43469 -T--A-------GT---------------------------
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 2 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193000  5 +  23207421 -T--A---ca---t---------------------------
i Balaenoptera_acutorostrata.KI537508.1                  I 2 C 0
s Balaenoptera_bonaerensis.DF707048.1                         3465  5 -     18090 -T--A---ca---t---------------------------
i Balaenoptera_bonaerensis.DF707048.1                    I 2 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    27642  5 +     34529 -g--t---ca---c---------------------------
i Beatragus_hunteri.BeaHun_scaffold_50177                I 2 I 1
s Bison_bison.KN261452.1                                    200733  5 -    288883 -g--t---ca---c---------------------------
i Bison_bison.KN261452.1                                 I 2 I 1
s Bos_indicus.CM003047.1                                  20273918  5 +  48749331 -g--t---ca---c---------------------------
i Bos_indicus.CM003047.1                                 I 2 I 1
s Bos_mutus.JH880303.1                                     1126478  5 -   1948126 -g--t---ca---c---------------------------
i Bos_mutus.JH880303.1                                   I 2 I 1
s Bos_taurus.CM000203.6                                   18084556  5 +  45695690 -g--t---ca---c---------------------------
i Bos_taurus.CM000203.6                                  I 2 I 1
s Bubalus_bubalis.KI419123.1                               2820232  5 +   4408762 -g--t---ca---c---------------------------
i Bubalus_bubalis.KI419123.1                             I 2 I 1
s Cacajao_ayresi.k141_552049                                102059 11 -    122966 -T--A--------CC--ATTAA---------A--------T
i Cacajao_ayresi.k141_552049                             I 4 C 0
s Cacajao_calvus.k141_5142                                   61564 11 +     81800 -T--A--------CC--ATTAA---------A--------T
i Cacajao_calvus.k141_5142                               I 4 C 0
s Cacajao_hosomi.k141_81245                                  30744 11 -     95584 -T--A--------CC--ATTAA---------A--------T
i Cacajao_hosomi.k141_81245                              I 4 C 0
s Cacajao_melanocephalus.k141_619699                         54845 11 -    119600 -T--A--------CC--ATTAA---------A--------T
i Cacajao_melanocephalus.k141_619699                     I 4 C 0
s Camelus_bactrianus.KN276810.1                           10003504  5 -  17673402 -t--a---ca---c---------------------------
i Camelus_bactrianus.KN276810.1                          I 2 C 0
s Camelus_dromedarius.KN272107.1                           2335980  5 -   7040546 -t--a---ca---c---------------------------
i Camelus_dromedarius.KN272107.1                         I 2 C 0
s Camelus_ferus.KB017975.1                                  404279  5 -   1652518 -t--a---ca---c---------------------------
i Camelus_ferus.KB017975.1                               I 2 C 0
s Capra_aegagrus.CM003241.1                               18830850  5 +  46296322 -g--t---ca---c---------------------------
i Capra_aegagrus.CM003241.1                              I 2 I 1
s Capra_hircus.CM004588.1                                 18061570  5 -  44709034 -g--t---ca---c---------------------------
i Capra_hircus.CM004588.1                                I 2 I 1
s Capromys_pilorides.CapPil_scaffold_65020                    2177 13 -     12242 -T--A------GAAT--ATTAAA--------A---------
i Capromys_pilorides.CapPil_scaffold_65020               I 2 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6350  4 -     11696 -T--A-------GT---------------------------
i Carollia_perspicillata.CarPer_scaffold_92756           I 2 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138518 21 +    179628 ----A------TATC--ATAATATTTCTATTT--------C
i Castor_canadensis.CasCan_scaffold_2074                 I 2 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     94802  5 +    217609 -T--A------TAT---------------------------
i Catagonus_wagneri.CatWag_scaffold_2839                 I 2 C 0
s Cercocebus_atys.KQ010504.1                               4478418 12 +   4669795 at--g--------tt--attaa---------a--------t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        2912 12 +     17872 AT--G--------TT--ATTAA---------A--------T
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           3507 12 -     14043 AT--G--------TT--ATTAA---------A--------T
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          11602 12 +     27781 AT--G--------TT--ATTAA---------A--------T
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        11749 12 -     20310 AT--G--------TT--ATTAA---------A--------T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          14729 12 +     29689 AT--G--------TT--ATTAA---------A--------T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            9485 12 -     20078 AT--G--------TT--ATTAA---------A--------T
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          17403 10 -     27936 ----G--------TT--ATTAA---------A--------T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            6269 12 -     17152 AT--G--------TT--ATTAA---------A--------T
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38825999 12 +  39242232 AT--G--------TT--ATTAA---------A--------T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21225503 12 -  21565898 AT--G--------TT--ATTAA---------A--------T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       42623 12 -     53127 AT--G--------TT--ATTAA---------A--------T
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        2872 12 +     13442 AT--G--------TT--ATTAA---------A--------T
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       17418 12 -     27947 AT--G--------TT--ATTAA---------A--------T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                          447 12 +     10558 AC--A--------TT--ATTAA---------A--------T
i Cercopithecus_pogonias.k141_2303387                    N 0 C 0
s Cercopithecus_roloway.k141_2581234                          3452 12 +     14005 AT--G--------TT--ATTAA---------A--------T
i Cercopithecus_roloway.k141_2581234                     I 1 C 0
s Cheracebus_lucifer.k141_49986                                675 11 -     17098 -T--A--------TC--ATTAA---------A--------T
i Cheracebus_lucifer.k141_49986                          I 4 C 0
s Cheracebus_lugens.k141_1393925                               551 11 +     17877 -T--A--------TC--ATTAA---------A--------T
i Cheracebus_lugens.k141_1393925                         I 4 C 0
s Cheracebus_regulus.k141_471822                            158118 11 -    216457 -T--A--------TC--ATTAA---------A--------T
i Cheracebus_regulus.k141_471822                         I 4 C 0
s Cheracebus_torquatus.k141_1170026                          62593 11 +     76511 -T--A--------TC--ATTAA---------A--------T
i Cheracebus_torquatus.k141_1170026                      I 4 C 0
s Chinchilla_lanigera.JH722012.1                           1254101  8 +   2543920 -t--ag---a---tt--aa----------------------
i Chinchilla_lanigera.JH722012.1                         I 2 I 3
s Chiropotes_israelita.k141_747660                           99181 11 +    146308 -T--A--------CC--ATTAA---------A--------T
i Chiropotes_israelita.k141_747660                       I 4 C 0
s Chiropotes_sagulatus.k141_1421488                          30989 11 -     50570 -T--A--------CC--ATTAA---------A--------T
i Chiropotes_sagulatus.k141_1421488                      I 4 C 0
s Chlorocebus_aethiops.ctg25                              18431322 12 -  18827391 AT--G--------TT--ATTAA---------A--------T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       17828 12 -     50209 AT--G--------TT--ATTAA---------A--------T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135424827 12 + 135778131 at--g--------tt--attaa---------a--------t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1913328 12 +   2368649 at--g--------tt--attaa---------a--------t
i Colobus_angolensis.KN981557.1                          I 1 C 0
s Colobus_guereza.LG01                                   199951577 12 + 200372422 AT--G--------TT--ATTAA---------A--------T
i Colobus_guereza.LG01                                   I 1 C 0
s Colobus_polykomos.k141_906115                              39853 12 +     84244 AT--G--------TT--ATTAA---------A--------T
i Colobus_polykomos.k141_906115                          I 1 C 0
s Condylura_cristata.JH655891.1                           17549285  5 -  53390261 -T--A------AAC---------------------------
i Condylura_cristata.JH655891.1                          I 2 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1732  5 +     23735 -T--A------AAT---------------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      I 2 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 51783 18 +     63868 ----T------CATT--ATGAA---------A--TATATTC
i Cricetomys_gambianus.CriGam_scaffold_18520             I 2 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29725  5 -     87169 -T--A------GAT---------------------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 2 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    838283 13 +   1526836 -C--A------AATC--ATTAA---------A--------C
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 2 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37048 14 +     51376 -C--A------GATT--ATTAAAT-------A---------
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 2 C 0
s Delphinapterus_leucas.KZ290073.1                        16812647  5 +  35494412 -T--A---Ca---t---------------------------
i Delphinapterus_leucas.KZ290073.1                       I 2 C 0
s Desmodus_rotundus.KZ672289.1                             8631360  4 +  20541912 -t--ag-------t---------------------------
i Desmodus_rotundus.KZ672289.1                           I 2 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37590 14 +     67921 -T--A------GATT--ACTAAA--------A--------A
i Dinomys_branickii.DinBra_scaffold_21862                I 2 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       311886  5 +    607251 -g--t---ca---c---------------------------
i Elaphurus_davidianus.JRFZ01104969.1                    I 2 I 1
s Ellobius_lutescens.LOEQ01008920.1                          22299 18 -    110024 ----T------AGTT--ATGAA---------GCatat-t-c
i Ellobius_lutescens.LOEQ01008920.1                      I 2 C 0
s Ellobius_talpinus.LOJH01081419.1                            2205 18 +      8657 ----T------AGTT--ATGAA---------A--CATATTC
i Ellobius_talpinus.LOJH01081419.1                       I 2 C 0
s Enhydra_lutris.KZ291758.1                               16330880  1 -  41312741 -------------T---------------------------
i Enhydra_lutris.KZ291758.1                              I 2 C 0
s Erythrocebus_patas.Contig38                             21207995 12 -  21539334 AT--G--------TT--ATTAA---------A--------T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12312  5 +    133382 -T--A------CAT---------------------------
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 2 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             26265  5 -     44125 -T--A------CAT---------------------------
i Eubalaena_japonica.EubJap_flattened_line_31514         I 2 C 0
s Felis_catus.CM001381.2                                  20238184  5 + 206538554 -t--a--t-a---g---------------------------
i Felis_catus.CM001381.2                                 I 2 C 0
s Felis_catus_fca126.CM031415.1                           20197027  5 + 205367284 -T--A------TAg---------------------------
i Felis_catus_fca126.CM031415.1                          I 2 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 10781  5 -     36744 -T--A------TAG---------------------------
i Felis_nigripes.FelNig_flattened_line_20823             I 2 C 0
s Fukomys_damarensis.KN121974.1                             851612 13 +   3816255 -T--A------GATG--GTTTA---------A--------T
i Fukomys_damarensis.KN121974.1                          I 2 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               2696 13 -      9135 -T--A------GATA--CCTAA---------A--------T
i Galeopterus_variegatus.GalVar_scaffold_108840          I 2 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     609849  5 -    660261 -g--t---ca---c---------------------------
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 2 I 1
s Glis_glis.GliGli_scaffold_19807                            32157 13 +     49224 -G--A------CTTA--GTTAT---------T--------C
i Glis_glis.GliGli_scaffold_19807                        I 2 C 0
s Gorilla_beringei.k141_3596273                              18806 12 -     32273 AT--G--------TT--ATTAA---------A--------T
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186340943 12 + 186649187 at--g--------tt--attaa---------a--------t
i Gorilla_gorilla.LT578341.1                             C 0 I 400
s Graphiurus_murinus.GraMur_scaffold_10447                   33834 15 +     78134 -G--A------CTTAAAATTAT---------T--------C
i Graphiurus_murinus.GraMur_scaffold_10447               I 4 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243559  5 +    327341 -T--A------GAT---------------------------
i Helogale_parvula.HelPar_flattened_line_2585            I 2 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 19063  5 +     36099 -g--t---ca---c---------------------------
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 2 I 1
s Heterocephalus_glaber.JH602082.1                        20663395 14 +  22651954 -T--A------GATT--ATTAAA--------A--------T
i Heterocephalus_glaber.JH602082.1                       I 2 C 0
s Hipposideros_armiger.JXIK01000431.1                       111762  5 +   1711038 -t--ag---a---t---------------------------
i Hipposideros_armiger.JXIK01000431.1                    I 2 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188                332  5 +      9903 -T--A------GAT---------------------------
i Hipposideros_galeritus.HipGal_scaffold_101188          I 2 C 0
s Hoolock_leuconedys.ctg274                                    437608 14 +    630532 ATATG--------TT--ATTAA---------A--------T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46265  5 +     55795 -T--A------GAT---------------------------
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 2 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84285 13 +    135385 -T--A------GATT--ATTAA---------A--------T
i Hystrix_cristata.HysCri_scaffold_5660                  I 2 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7522180 13 -   7955117 -C--C------AATT--ATTAC---------A--------T
i Ictidomys_tridecemlineatus.JH393364.1                  I 2 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               23851  5 +     23964 -T--A------TGT---------------------------
i Inia_geoffrensis.IniGeo_flattened_line_48101           I 2 C 0
s Jaculus_jaculus.JH725527.1                               8278344 15 -   9596543 -------------TT--GTTAA---------A--CATATTC
i Jaculus_jaculus.JH725527.1                             I 3 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                3226  5 -      3359 -T--A------CAT---------------------------
i Kogia_breviceps.KogBre_flattened_line_192630           I 2 C 0
s Leptonychotes_weddellii.KB714746.1                       3044330  4 +   3914936 ----agg------t---------------------------
i Leptonychotes_weddellii.KB714746.1                     I 2 C 0
s Lipotes_vexillifer.KE559953.1                             268915  5 -    662738 -T--A---Ca---t---------------------------
i Lipotes_vexillifer.KE559953.1                          I 2 C 0
s Lophocebus_aterrimus.ctg367                              1439960 12 +   1826925 AT--G--------TT--ATTAA---------A--------T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                               9769 12 +     40492 AT--G--------TT--ATTAA---------A--------T
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679023 12 +  60120075 AT--G--------TT--ATTAA---------A--------T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 15541 12 -     26193 AT--G--------TT--ATGAA---------A--------T
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            83317 12 -    114318 AT--G--------TT--ATTAA---------A--------T
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9008 12 -     23192 AT--G--------TT--ATTAA---------A--------T
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                18472 12 -     29190 AT--G--------TT--ATTAA---------A--------T
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27050 12 +     37952 AT--G--------TT--ATTAA---------A--------T
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842129 12 + 187317192 at--g--------tt--attaa---------a--------t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25460705 12 -  25927173 at--g--------tt--attaa---------a--------t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  82906 12 +     89720 AT--G--------TT--ATTAA---------A--------T
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 9899 12 +     20474 AT--G--------TT--ATTAA---------A--------T
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   9696 12 -     14993 AT--G--------TT--ATTAA---------A--------T
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  332558 12 -    668171 AT--G--------TT--ATTAA---------A--------T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8008 12 -     24072 AT--G--------TT--ATTAA---------A--------T
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               28639 12 -     45290 AT--G--------TT--ATTAA---------A--------T
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91894  5 +     94391 -C--A------AAT---------------------------
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 2 C 0
s Mandrillus_leucophaeus.scaffold280                      23940231 12 -  24302211 AT--G--------TT--ATTAA---------A--------T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354343 12 +    752769 AT--G--------TT--ATTAA---------A--------T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              19486  5 +    737560 -t--A------GAT---------------------------
i Manis_javanica.JSZB01003497.1                          I 2 C 0
s Manis_pentadactyla.KN006162.1                              51504  5 -    317179 -t--ag---a---t---------------------------
i Manis_pentadactyla.KN006162.1                          I 2 C 0
s Marmota_marmota.CZRN01000018.1                          33104467 13 -  40650429 -C--C------AATT--ATTAC---------A--------T
i Marmota_marmota.CZRN01000018.1                         I 2 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        14584  3 -    207569 -T--A--------G---------------------------
i Megaderma_lyra.MegLyr_scaffold_4542                    I 2 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             11592  1 +     13704 -------------T---------------------------
i Mellivora_capensis.MelCap_flattened_line_69365         I 2 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 34533 18 +    140813 ----A------AGTT--ATGAA---------A--TATATTC
i Meriones_unguiculatus.MerUng_scaffold_7390             I 2 C 0
s Mesocricetus_auratus.KB708134.1                         12184004 18 -  29670104 ----T------AGCT--ATGAA---------A--TATATTC
i Mesocricetus_auratus.KB708134.1                        I 2 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    4521  5 +     10310 -T--A------CAT---------------------------
i Mesoplodon_bidens.MesBid_scaffold_108144               I 2 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                17109  2 -     19307 -T--A------------------------------------
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 2 I 17
s Microtus_ochrogaster.CM001695.1                         11262281 18 -  27267610 ----T------AGTT--Atgaa---------acatata--c
i Microtus_ochrogaster.CM001695.1                        I 2 C 0
s Miopithecus_ogouensis.k141_534055                          11906 10 -     28506 ----G--------TT--ATTAA---------A--------T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         7198  4 -      8324 ----agg------t---------------------------
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 2 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    28030  5 -    437263 -T--A------CAT---------------------------
i Monodon_monoceros.MonMon_M_scaffold_103                I 2 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142904  4 -    366855 -T--A-------GG---------------------------
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 2 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   1928  5 +     82753 -g--ccg------c---------------------------
i Moschus_moschiferus.MosMos_scaffold_13123              I 2 I 1
s Mus_caroli.LT608237.1                                   84362912 20 - 120012414 ----g----a-g-tt--ataaa---------atatatattc
i Mus_caroli.LT608237.1                                  I 2 C 0
s Mus_musculus.chr8                                       87652411 20 - 129401213 ----g----a-g-tt--ataaa---------atatatattc
i Mus_musculus.chr8                                      I 2 C 0
s Mus_pahari.LT608297.1                                   31357145 20 -  89631738 ----g----a-g-tt--ataaa---------atatatgttc
i Mus_pahari.LT608297.1                                  I 2 C 0
s Mus_spretus.CM004101.1                                  90754902 20 - 130317789 ----g----aa--tt--ataaa---------atatatattc
i Mus_spretus.CM004101.1                                 I 2 C 0
s Mustela_putorius.JH418006.1                               302987  1 -  14710649 -------------T---------------------------
i Mustela_putorius.JH418006.1                            I 2 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     72359 13 -     80779 -T--A------AAAT--ATTAAA--------A---------
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 2 C 0
s Nannospalax_galili.KL204047.1                            2036717 18 -   3037898 ----T------AATT--ATGAA---------A--TGTATCC
i Nannospalax_galili.KL204047.1                          I 2 C 0
s Nasalis_larvatus.k141_413338                               17960 12 +     21681 AT--G--------TT--ATTAA---------A--------T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308791  4 +  31847680 ----agg------t---------------------------
i Neomonachus_schauinslandi.NINY01007730.1               I 2 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5866999  5 +   7148211 -T--A---Ca---t---------------------------
i Neophocaena_asiaeorientalis.KZ687982.1                 I 2 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    759109  4 +    783361 -T--A-------GC---------------------------
i Noctilio_leporinus.NocLep_scaffold_251                 I 2 C 0
s Odobenus_rosmarus.KB229312.1                              507933  4 -   2017862 ----agg------t---------------------------
i Odobenus_rosmarus.KB229312.1                           I 2 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          77760  5 -    150152 -g--t---ca---c---------------------------
i Okapia_johnstoni.LVCL01S0005463.1                      I 2 I 1
s Ondatra_zibethicus.OndZib_scaffold_46174                   26920 18 +     28053 ----T------AGTT--ATGAA---------A--CATATTC
i Ondatra_zibethicus.OndZib_scaffold_46174               I 2 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    81933 18 +    102263 ----T------AGTT--ATGAA---------A--TATATTC
i Onychomys_torridus.OnyTor_scaffold_2986                I 2 C 0
s Orcinus_orca.KB316932.1                                  2782908  5 -  10937097 -T--A---Ca---t---------------------------
i Orcinus_orca.KB316932.1                                I 2 C 0
s Ovis_aries.CM001607.2                                   17587036  5 +  44047080 -g--t---ca---c---------------------------
i Ovis_aries.CM001607.2                                  I 2 I 1
s Ovis_canadensis.OviCan_scaffold_2572                      175021  5 -    191736 -g--t---ca---c---------------------------
i Ovis_canadensis.OviCan_scaffold_2572                   I 2 I 1
s Pan_paniscus.KQ411613.1                                    46908 12 +     80009 at--g--------tt--attaa---------a--------t
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189145783 12 + 189151597 at--g--------tt--attaa---------a--------t
i Pan_troglodytes.CM009242.2                             C 0 I 395
s Panthera_onca.PanOnc_flattened_line_3271                  152389  5 +    230217 -T--A------TAG---------------------------
i Panthera_onca.PanOnc_flattened_line_3271               I 2 C 0
s Panthera_pardus.KV860321.1                                265598  5 +  18783137 -t--a--t-a---g---------------------------
i Panthera_pardus.KV860321.1                             I 2 C 0
s Panthera_tigris.KE722367.1                               4722478  5 -   8748460 -T--A------TAg---------------------------
i Panthera_tigris.KE722367.1                             I 2 C 0
s Pantholops_hodgsonii.KE114653.1                          1265925  5 -   2937107 -g--t---ca---c---------------------------
i Pantholops_hodgsonii.KE114653.1                        I 2 I 1
s Papio_anubis.CM001495.2                                183446033 12 + 183742232 at--g--------tt--ataaa---------a--------t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             9683 12 +     20448 AT--G--------TT--ATTAA---------A--------T
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20566491 12 +  20919399 AT--G--------TT--ATTAA---------A--------T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   8423 12 +     41871 AT--G--------TT--ATTAA---------A--------T
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    11716 12 +     27711 AT--G--------TT--ATTAA---------A--------T
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  2715 12 -     11374 AT--G--------TT--ATTAA---------A--------T
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13885  3 -     78924 -T--A--------T---------------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 2 C 0
s Peromyscus_maniculatus.KI615324.1                       18196561 18 -  18517816 ----T------AATt--atgaa---------atatat-t-c
i Peromyscus_maniculatus.KI615324.1                      I 2 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     29308 14 -     29689 -T--A------GATT--ATTAAA--------C--------T
i Petromus_typicus.PetTyp_scaffold_42190                 I 2 I 24
s Phocoena_phocoena.PhoPho_flattened_line_24159               9953  5 +     63832 -T--A------CAT---------------------------
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 2 C 0
s Piliocolobus_badius.k141_1142974                            1032 12 +     68526 AT--G--------TT--ATTAA---------A--------T
i Piliocolobus_badius.k141_1142974                       I 1 C 0
s Piliocolobus_gordonorum.k141_381342                        41178 12 +     89929 AT--G--------TT--ATTAA---------A--------T
i Piliocolobus_gordonorum.k141_381342                    I 1 C 0
s Piliocolobus_kirkii.k141_448987                            42592 12 +     51399 AT--G--------TT--ATTAA---------A--------T
i Piliocolobus_kirkii.k141_448987                        I 1 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14298829 12 -  14605196 at--g--------tt--attaa---------a--------t
i Piliocolobus_tephrosceles.PDMG02000141.1               I 1 C 0
s Pithecia_albicans.k141_1476471                              4450 11 +     26961 -T--A--------TC--ATTAA---------A--------T
i Pithecia_albicans.k141_1476471                         I 4 C 0
s Pithecia_chrysocephala.k141_839575                           595 11 +     23417 -T--A--------TC--ATTAA---------A--------T
i Pithecia_chrysocephala.k141_839575                     I 4 C 0
s Pithecia_hirsuta.k141_305604                                4442 11 +     29694 -T--A--------TG--ATTAA---------A--------T
i Pithecia_hirsuta.k141_305604                           I 4 C 0
s Pithecia_mittermeieri.k141_446740                          29468 11 +     52772 -T--A--------TC--ATTAA---------A--------T
i Pithecia_mittermeieri.k141_446740                      I 4 C 0
s Pithecia_pissinattii.k141_1824269                           4464 11 +     26198 -T--A--------TC--ATTAA---------A--------T
i Pithecia_pissinattii.k141_1824269                      I 4 C 0
s Pithecia_pithecia.tarseq_165                             3941013 11 +   4542175 -T--A--------TC--ATTAA---------A--------T
i Pithecia_pithecia.tarseq_165                           I 4 C 0
s Pithecia_vanzolinii.k141_1697688                            4428 11 -     23490 -T--A--------TC--ATTAA---------A--------T
i Pithecia_vanzolinii.k141_1697688                       I 4 C 0
s Plecturocebus_bernhardi.k141_2549090                        8691 11 -     39866 -T--A--------TC--ATTGA---------A--------T
i Plecturocebus_bernhardi.k141_2549090                   I 4 C 0
s Plecturocebus_brunneus.k141_1495506                        17857 11 +     34906 -T--A--------TC--ATTGA---------A--------T
i Plecturocebus_brunneus.k141_1495506                    I 4 C 0
s Plecturocebus_caligatus.k141_1382851                       22121 11 +     87950 -T--A--------TC--ATTGA---------A--------T
i Plecturocebus_caligatus.k141_1382851                   I 4 C 0
s Plecturocebus_cinerascens.k141_1164729                     22948 11 +     88961 -T--A--------TC--ATTGA---------A--------T
i Plecturocebus_cinerascens.k141_1164729                 I 4 C 0
s Plecturocebus_cupreus.k141_2351393                          8619 11 +     39403 -T--A--------TC--ATTGA---------A--------T
i Plecturocebus_cupreus.k141_2351393                     I 4 C 0
s Plecturocebus_dubius.k141_1058799                          22400 11 -     87928 -T--A--------TC--ATTGA---------A--------T
i Plecturocebus_dubius.k141_1058799                      I 4 C 0
s Plecturocebus_grovesi.k141_2013005                         29359 11 +     60166 -T--A--------TC--ATTGA---------A--------T
i Plecturocebus_grovesi.k141_2013005                     I 4 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      29556 11 +     67232 -T--A--------TC--ATTGA---------A--------T
i Plecturocebus_hoffmannsi.k141_3303950                  I 4 C 0
s Plecturocebus_miltoni.k141_349282                          25029 11 +     90634 -T--A--------TC--ATTGA---------A--------T
i Plecturocebus_miltoni.k141_349282                      I 4 C 0
s Plecturocebus_moloch.k141_1031110                          22401 11 -     89403 -T--A--------TC--ATTGA---------A--------T
i Plecturocebus_moloch.k141_1031110                      I 4 C 0
s Pongo_abelii.CM009266.2                                189133927 12 + 189387572 at--g--------tt--attaa---------a--------t
i Pongo_abelii.CM009266.2                                C 0 I 397
s Pongo_pygmaeus.ctg66                                     9573536 12 +   9816681 AT--G--------TT--ATTAA---------A--------T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76144 12 -     81375 AT--G--------TC--ATTAA---------A--------T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              7961 12 +     19060 AT--G--------TT--ATTAA---------A--------T
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            12174 18 -     21651 ----A------AGTC--ATGAA---------A--TATATTC
i Psammomys_obesus.NESX01036370.1                        I 2 C 0
s Pteronotus_parnellii.KE909381.1                            16392  4 -     21811 -t--ag-------t---------------------------
i Pteronotus_parnellii.KE909381.1                        I 2 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41794  1 +     42204 -------------T---------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 2 C 0
s Puma_concolor.QAVW01001104.1                            20275548  5 -  38429054 -t--a--t-a---g---------------------------
i Puma_concolor.QAVW01001104.1                           I 2 C 0
s Pygathrix_cinerea.k141_1153803                             17945 12 -     91421 AT--G--------TT--ATTAA---------A--------T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612069 12 +   7812017 AT--G--------TT--ATTAA---------A--------T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             17976 12 -     72585 AT--G--------TT--ATTAA---------A--------T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6506  5 +     55207 -g--t---ca---c---------------------------
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 2 I 1
s Rhinolophus_sinicus.LVEH01000134.1                        368240  1 -   3329780 -------------t---------------------------
i Rhinolophus_sinicus.LVEH01000134.1                     I 2 C 0
s Rhinopithecus_bieti.k119_217274                             9648 12 -     11128 AT--G--------TT--ATTAA---------A--------T
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239012 12 - 195417433 at--g--------tt--attaa---------a--------t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7674659 12 +   7961872 AT--G--------TT--ATTAA---------A--------T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89080  5 -     96226 -T--C------AAT---------------------------
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 2 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154432  5 -    313613 -T--A------GAC---------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 2 C 0
s Semnopithecus_entellus.k141_1672505                         2818 12 -     12572 AT--G--------TT--ATTAA---------A--------T
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      29670 12 +     39453 AT--G--------TT--ATTAA---------A--------T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           10178 12 +     27826 AT--G--------TT--ATTAA---------A--------T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             9714 12 -     19483 AT--G--------TT--ATTAA---------A--------T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3017 12 -     12762 AT--G--------TT--ATTAA---------A--------T
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           2865 12 +     13763 AT--G--------TT--ATTAA---------A--------T
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     2085 11 -     30804 ----T------AGTT--ATTCT---------G---------
i Sigmodon_hispidus.SigHis_scaffold_42075                I 2 I 3
s Solenodon_paradoxus.SolPar_flattened_line_126               4972  2 +   1910179 -T--A------------------------------------
i Solenodon_paradoxus.SolPar_flattened_line_126          I 2 I 81
s Sorex_araneus.JH798187.1                                13652237  5 -  18376816 -t--a--t-a---c---------------------------
i Sorex_araneus.JH798187.1                               I 2 C 0
s Spermophilus_dauricus.KZ294078.1                         1955326 13 -   3870691 -c--c----a--ATC--ATTAC---------A--------T
i Spermophilus_dauricus.KZ294078.1                       I 2 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             32268  4 +     97271 ----A------GCT---------------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 2 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              19559  5 -    196729 -T--A------GAT---------------------------
i Suricata_suricatta.SurSur_flattened_line_6629          I 2 C 0
s Sus_scrofa.CM000828.4                                    6812372  5 +  69701581 -t--a--t-a---t---------------------------
i Sus_scrofa.CM000828.4                                  I 2 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                12062  5 +     41958 -T--A------GAT---------------------------
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 2 C 0
s Theropithecus_gelada.CM009954.1                        186431339 12 + 186847797 at--g--------tt--attaa---------a--------t
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106600 14 +    114563 -T--A------GATC--ATTAAA--------A--------T
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 2 I 31
s Tonatia_saurophila.TonSau_scaffold_294                     82450  4 +    610378 -T--A-------GT---------------------------
i Tonatia_saurophila.TonSau_scaffold_294                 I 2 C 0
s Trachypithecus_auratus.k141_722599                         13763 12 -     20410 AT--G--------TT--ATTAA---------A--------T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      2879 12 -     12674 AT--G--------TT--ATTAA---------A--------T
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       13871 12 +     19930 AT--G--------TT--ATTAA---------A--------T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      10266 12 -     19997 AT--G--------TT--ATTAA---------A--------T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            50411 12 -     60166 AT--G--------TT--ATTAA---------A--------T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        17874 12 -     27529 AT--G--------TT--ATTAA---------A--------T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     17824 12 -     18194 AT--G--------TT--ATTAA---------A--------T
i Trachypithecus_hatinhensis.k141_143409                 C 0 C 0
s Trachypithecus_laotum.k141_907409                          11534 12 -     21137 AT--G--------TT--ATTAA---------A--------T
i Trachypithecus_laotum.k141_907409                      I 1 C 0
s Trachypithecus_leucocephalus.k141_587342                   10236 12 -     10723 AT--G--------TT--ATTAA---------A--------T
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         9413 12 +      9834 AT--G--------TT--ATTAA---------A--------T
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        27736 12 +     32220 AT--G--------TT--ATTAA---------A--------T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5941833 12 +   6242583 AT--G--------TT--ATTAA---------A--------T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11084 12 +     20839 AT--G--------TT--ATTAA---------A--------T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15739150  5 +  33153633 -T--A---Ca---t---------------------------
i Tursiops_truncatus.MRVK01000835.1                      I 2 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54533  5 -     77625 -T--A------GAC---------------------------
i Uropsilus_gracilis.UroGra_scaffold_12083               I 2 C 0
s Ursus_maritimus.KK499267.1                               4851651  4 -   5085361 ----A------GGT---------------------------
i Ursus_maritimus.KK499267.1                             I 2 C 0
s Vicugna_pacos.KN270157.1                                 5373023  5 -   5488506 -t--a---ca---c---------------------------
i Vicugna_pacos.KN270157.1                               I 2 C 0
s Xerus_inauris.XerIna_scaffold_2302                          2329 13 +    224448 -C--A------AATT--ATTAC---------A--------T
i Xerus_inauris.XerIna_scaffold_2302                     I 2 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      16085 15 +     63895 -------------TT--ATTAA---------A--TATATTC
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 3 C 0
e Lagothrix_lagothricha.k141_1005387                         15287  0 -     38430 C
e Ateles_paniscus.k141_457735                                21129  0 +     72325 C
e Ateles_marginatus.k141_803263                              13240  0 -     40414 C
e Ateles_geoffroyi_a.k141_833924                                8856  0 -     89868 C
e Ateles_chamek.k141_1806455                                 27084  0 -     30947 C
e Ateles_belzebuth.k141_445860                               44280  0 -     48001 C
e Ateles_geoffroyi_b.tarseq_1536                             21209484  0 -  21539123 C
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Alouatta_seniculus.k141_117119                             16471  0 +     50774 C
e Alouatta_puruensis.k141_362188                              2019  0 +      5663 C
e Alouatta_palliata.k141_2135620                              5287  0 +     47717 C
e Alouatta_nigerrima.k141_1929159                             1292  0 +     30492 C
e Alouatta_macconnelli.k141_918386                            2334  0 -      9457 C
e Alouatta_juara.k141_1302312                                 1197 57 +     27940 I
e Alouatta_discolor.k141_566626                              12779  0 +     28687 C
e Alouatta_caraya.k141_1701091                                2327  0 -     36483 C
e Alouatta_belzebul.k141_3560514                              9218  0 +     51355 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 12422 320 -     43706 T
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Tupaia_chinensis.KB320699.1                              2157208  1 +   4065304 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_40725                     822 276 +     27266 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   7643  0 +      8208 C
e Tarsius_wallacei.k141_254427                                1877  3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080  3 +     70052 I
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73921  0 +    116680 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Rattus_norvegicus.chr16                                 53571770 803 +  90668790 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Pteropus_alecto.KB030862.1                              22978014  7 +  28871421 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             2992 11 +     22620 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Otocyon_megalotis.JAEUCK010005147.1                       463984 325 -    559221 T
e Oryctolagus_cuniculus.CM000791.1                        67148885  2 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Ochotona_princeps.JH802162.1                             1365427  2 +   3988456 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9150892 182 -   9404916 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190536  0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_281845                        1211 12 +      1835 I
e Myotis_lucifugus.GL429869.1                              3905059 12 -   4330536 I
e Myotis_davidii.KB100139.1                                1588961 10 -   6019432 I
e Myotis_brandtii.KE162005.1                                279962 1755 -  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           8065 12 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             35221  4 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1851541  4 +   8254450 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Lycaon_pictus.CM007581.1                                17956957 950 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     7984  2 -     14121 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Lasiurus_borealis.LasBor_scaffold_50988                    16384 22 +     29960 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2146969 11 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64769  0 +   2246927 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Crocidura_indochinensis.CroInd_scaffold_37019               4143  0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1750  0 -      8501 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Cephalopachus_bancanus.k141_1423433                         6085  3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Carlito_syrichta.NW_007259797.1                           156587  3 -    496798 I
e Canis_lupus_orion.HG994398.1                            18502019 950 +  63665305 I
e Canis_lupus_familiaris.chr16                            17960717 950 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9036246 952 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     1546 950 -     43241 I
e CanFam4.chr16                                           17800803 952 -  60362399 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       9577 400 +     62944 TTAttcatatttttatattctagtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaagactgggtaatttataa-ggaaagtttttgtcttaattgactcaca-tggctgggaagg-cctcaggaaactt--acaatcatggctgaaggggaagcaagcacgtccttcttcacaaaggggtaggagagagaag-tgcctagcaaa-gaggggaaag--c-cccttat-aca--accatcaggtttcatgagaattta-ctcact-atcttgagaacagcag-cataag-ggtaact-gcccc--------------atgattcaattacctcccaccaggtccctcccaccacacat-ggggattatgggaactaaaattcaagattagatttgggtggggacagagccaaaccatatcatctaga
s Acomys_cahirinus.AcoCah_scaffold_12655                     72536   9 +     87051 ACATTT--------------AGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 1
s Allactaga_bullata.AllBul_scaffold_9566                     75657   9 -     89534 AGATTT--------------AAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 1
s Allenopithecus_nigroviridis.k141_3361533                   17473 375 -     52922 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggcttaattgactcaca-tgcctgggatgg-cctcaggaaactt--acactgatgactgaaggggaagcaagcctgtccttc---acaaaggggtaggagagagaag-tgccgagcaaa-gaggggaaag--t-cccttaa-aaa--cccatcagatcttgtgagaattta-ctcact-atctcgagaacagcag-cgtgag-ggtaact-gcccc--------------atgattcaattacctcccactgggtccctcctaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         17401 378 -     28001 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggcttaattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcctgtccttcttcacaaaggggtaggagagagaag-tgcggagcaaa-gaggggaaag--t-cccttaa-aaa--cccatcagatcttgtgagaattta-cccact-atcttgagaacagcag-cgtgag-ggtaact-gcccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          7896 378 -     18505 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggcttaattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcctgtccttcttcacaaaggggtaggagagagaag-tgcggagcaaa-gaggggaaag--t-cccttaa-aaa--cccatcagatcttgtgagaattta-cccact-atctcgagaacagcag-cgtgag-ggtaact-gcccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatgtcaTCTAGA
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           8751 376 -     12518 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggcttaattgact--ca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcctgtccttcttcacaaaggggtaggagagagaag-tgcggagcaaa-gaggggaaag--t-cccttta-aaa--cccatcagatcttgtgagaattta-cccact-atcttgagaacagcag-cgtgag-ggtaact-gcccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatgtcaTCTAGA
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              9218 375 +     51355 ----------------------GTCta-ttagtcc-attctcatgctgctat-gaaaacat-acccaagactgggtaatttataaaggaaag----tgatttaactgactcat-gtggctagaaagg-cctcaggaaactt--acaatcatgactgaaggggaagcaaacacatccttcgtcacaaagcggtaggagagagaag-tgctgagcaaa-aaagggaaag--c-cctttat-aaa--accatcagatctcatgagaatgta-ctcacttatcatgagaacaacag-cataag-ggtaact-gcccc-t------------gtgattcaattacctcccacc-tgtccctcccaccacacat-ggggattatgggaactaaaattcaagatgaga-ttgggtggagacatggccaaaccatatcaTCTAGA
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                2327 371 -     36483 ----------------------GTCta-ttagtcc-attctcatgctgctat-gaaaacat-acccaagactgggtaatttataaaggaaag----tgatttaactgattcac-gtggctggaaagg-cctcaggaaactt--acaatcatgactgaaggggaagcaaacacatccttcttcacaaagcggtaggagagagacg-ggc-----aaa-aaagggaaag--c-cctgtag-aaa--accatcagatctcatgagaatgta-ctcacttatcatgagaacaacag-cataag-ggtaact-gcccc-t------------gtgattcaattacctcccacc-tgtccctcccaacacacat-ggggattatgggaactaaaattcaagatgagatttgggtggagacatggccaaaccatatcaTCTAGA
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              12779 376 +     28687 ----------------------GTCta-ttagtcc-attctcatgctgctat-gaaaacat-acccaagactgggtaatttataaaggaaag----tgatttaactgactcat-gtggctagaaagg-cctcaggaaactt--acaatcatgactgaaggggaagcaaacacatccttcttcacaaagcggtaggagagagaag-tgctgagcaaa-aaagggaaag--c-cctttat-aaa--accatcagatctcatgagaatgta-ctcacttatcatgagaacaacag-cataag-ggtaact-gcccc-t------------gtgattcaattacctcccacc-tgtccctcccaccacacat-ggggattatgggaactaaaattcaagatgagatttgggtggagacatggccaaaccatatcaTCTAGA
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 1254 369 +     27940 ----------------------GTCta-ttagtcc-attctcatgctgctat-gaaaacat-acccaagactgggtaatttataaaggaaag----tgatttaactgactcac-gtggctggaaagg-cctcaggaaactt----aatcatgactgaaggggaagcaaacacatccttcttcacaaagccgtaggagagagaag-tgc-----aaa-aaacggaaag--c-cctttat-aaa--accatcagatctcatgagaatgta-ctcacttatcatgagaacaacaa-cataag-ggtaact-gcccc-t------------gtgattcaattacctcccacc-tgtccctcccaccacacat-ggggattatgggaactaaaattcaagatgagatttgggtggagacatggccaaaccatatcaTCTAGA
i Alouatta_juara.k141_1302312                            I 57 C 0
s Alouatta_macconnelli.k141_918386                            2334 371 -      9457 ----------------------GTCta-ttagtcc-attctcatgctgctat-gaaaacat-acccaagactgggtaatttataaaggaaag----tgatttaactgactcac-gtggctggaaagg-cctcaggaaactt--acaatcatgactgaaggggaagcaaacacatccttcttcacaaagcggtaggagagagaag-tgc-----aaa-aaagggaaag--c-cctttat-aaa--accatcagatctcatgagaatgta-ctcacttatcatgagaacaacag-cataag-ggtaact-gcccc-t------------gtgattcaattacctcccacc-tgtccctcccaccacacat-ggggattatgggaactaaaattcaagatgagatttgggtggagacatggccaaaccatatcaTCTAGA
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             1292 371 +     30492 ----------------------GTCta-ttagtcc-attctcatgctgctat-gaaaacat-acccaagactgggtaatttataaaggaaag----tgatttaactgactcac-gtggctggaaagg-cctcaggaaactt--acaatcatgactgaaggggaagcaaacacatcattcttcacaaagcggtaggagagagaag-tgc-----aaa-aaagggaaag--c-cctttat-aaa--accatcagatctcatgagaatgta-ctcacttatcatgagaacaacag-cataag-ggtaact-gcccc-t------------gtgattcaattacctcccacc-tgtccctcccaccacacat-ggggattatgggaactaaaattcaagatgagatttgggtggagacatggccaaaccatatcaTCTAGA
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              5287 371 +     47717 ----------------------GTCta-ttagtcc-attctcatgcttctat-gaaaacat-acccaagactgggtaatttataaaggaaag----tgatttaactgactcac-gtggctggaaagg-cctcaggaaacta--acaatcatgactgaaggggacgcaaacacatccttcttcacaaagcggtaggagagagaag-tgc-----aaa-aaagggaaag--c-cctttat-aaa--accatcagatctcatgagaatgta-ctcacttatcatgagaacagcag-cataag-ggtaact-gcccc-t------------gtgattcaattacctcccacc-tgtcccttccaccacacat-ggggattatgggaactaaaattcaagatgagatctgggtggagacatggccaaaccatatcaTCTAGA
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              2019 371 +      5663 ----------------------GTCta-ttagtcc-attctcatgctgctat-gaaaacat-acccaagactgggtaatttataaaggaaag----tgatttaactgactcac-gtggctggaaagg-cctcaggaaactt--acaatcatgactgaaggggaagcaaacacatccttcttcacaaagcggtaggagagagaag-tgc-----aaa-aaagggaaag--c-cctttat-aaa--accatcagatctcatgagaatgta-ctcacttatcatgagaacaacag-cataag-ggtaact-gcccc-t------------gtgattcaattacctcccacc-tgtccctcccaccacacat-ggggattatgggaactaaaattcaagatgagatttgggtggagacatggccaaaccatatcaTCTAGA
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             16471 371 +     50774 ----------------------GTCta-ttagtcc-attctcatgctgctat-gaaaacat-acccaagactgggtaatttataaaggaaag----tgatttaactgactcac-ttggctggaaagg-cctcaggaaactt--acaatcatgactgaaggggaagcaaacacatccttcttcacaaagccgtaggagagagaag-tgc-----aaa-aaagggaaag--c-cctttat-aaa--accatcagatctcatgagaatgta-ctcacttatcatgagaacaacag-cataag-ggtaact-gcccc-t------------gtgattcaattacctcccacc-tgtccctcccaccacacat-ggggattatgggaactaaaattcaagatgagatttgggtggagacatggccaaaccatatcaTCTAGA
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13880   9 +     20879 TTATTT--------------TAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 1
s Ateles_geoffroyi_b.tarseq_1536                             21209484 373 -  21539123 ----------------------gtcta-ttagtcc-attctcatgctgctat-gaaaacat-acccaagactgggtaatttataaaggaaag----tgatttaattgactcac-gtggctggaaagg-cctcaggaaactt--acaatcatgactgaaggggaagcaaacacatccttcttcacaaaggggtaggagagagaag-tgctgagcaaa-aaagggaaag--t-cctttat-aaa--accatcagatctcatgagaaggta-ctcactt---atgagaacagcag-cataag-ggtaact-gcccc-t------------gtgattcaattacctcccacc-tgtccctcccgccacgcat-ggggattatgggaactaaaattcaagatgagatttgggtggggacatggccaaaccatagcaTCTAGA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               44280 373 -     48001 ----------------------gTCta-ttagtcc-attctcatgctgctat-gaaaacat-acccaagactgggtaatttataaaggaaag----tgatttaattgactcac-gtggctggaaagg-cctcaggaaactt--acaatcatgactgaaggggaagcaaacacatccttcttcacaaaggggtaggagagagaag-tgctgagcaaa-aaagggaaag--c-cctttat-aaa--accatcagatctcatgagaaggta-ctcactt---atgagaacagcag-cataag-ggtaact-gcccc-t------------gtgattcaattacctcctacc-tgtccctcccgccacgcat-ggggattatgggaactaaaattcaagatgagatttgggtggggacatggccaaaccataGAATCTAGA
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 27084 373 -     30947 ----------------------gtcta-ttagtcc-attctcatgctgctat-gaaaacat-acccaagactgggtaatttataaaggaaag----tgatttaattgactcac-gtggctggaaagg-cctcaggaaactt--acaatcataactgaaggggaagcaaacacatccttcttcacaaaggggtaggagagagaag-tgctgagcaaa-aaagggaaag--c-cctttat-aaa--accatcagatctcatgagaaggta-ctcactt---atgagaacagcag-cataag-ggtaact-gcccc-t------------gtgattcaattacctcccacc-tgtccctcccgccacgcat-ggggattatgggaactaaaattcaagatgagatttgggtggggacatggccaaaccatagcaTCTAGA
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                8856 373 -     89868 ----------------------gtcta-ttagtcc-attctcatgctgctat-gaaaacat-acccaagactgggtaatttataaaggaaag----tgatttaattgactcac-gtggctggaaagg-cctcaggaaactt--acaatcatgactgaaggggaagcaaacacatccttcttcacaaaggggtaggagagagaag-tgctgagcaaa-aaagggaaag--t-cctttat-aaa--accatcagatctcatgagaaggta-ctcactt---atgagaacagcag-cataag-ggtaact-gcccc-t------------gtgattcaattacctcccacc-tgtccctcccgccacgcat-ggggattatgggaactaaaattcaagatgagatttgggtggggacatggccaaaccatagcaTCTAGA
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              13240 373 -     40414 ----------------------gtcta-ttagtcc-attctcatgctgctat-gaaaacat-acccaagactgggtaatttataaaggaaag----tgatttaattgactcac-gtggctggaaagg-cctcaggaaactt--acaatcatgactgaaggggaagcaaacacatccttcttcacaaaggggtaggagagagaag-tgctgagcaaa-aaagggaaag--c-cccttat-aaa--accatcagatctcatgagaaggta-ctcactt---atgagaacagcag-cataag-ggtaact-gcccc-t------------gtgattcaattacctcccacc-tgtccctcccgccacgcat-ggggattatgggaactaaaattcaagatgagatttgggtggggacatggccaaaccatagcaTCTAGA
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                21129 373 +     72325 ----------------------gtcta-ttagtcc-attctcatgctgctat-gaaaacat-acccaagactgggtcatttataaaggaaag----tgatttaatagactcac-gaggctggaaagg-cctcaggaaactt--accatcataactgaaggggaagcaaacacatccttcttcacaaaggggtaggagaaagaag-tgctgagcaaa-aaagggaaag--c-cctttat-aaa--accatcagatctcatgagaaggta-ctcactt---atgagaacagcag-cataag-ggtaact-gcccc-t------------gtgattcaattacctcccacc-tgtccctcccgccacgcat-ggggattatgggaactaaaattcaagatgagatttgggtggggacatggccaaaccatagcaTCTAGA
i Ateles_paniscus.k141_457735                            C 0 C 0
s Cacajao_ayresi.k141_552049                                102070 404 -    122966 TCATTCATATTTTTACATTCTAGTCta-ttagtcc-attcttatgctgctgt-gaaaacat-acccaagactgggtaatttctaaaggaaag----tgacttaattgactcgc-gtggctggaaagg-cctcaggaaactt--acaatcctgactgaaggggaagcgaacccatccttcttcacaaaggggtaggagagagaac-tgctgagcaaa-gaagagaaag--c-cctttat-aaa--accatcagctctcatgagaacgca-ctcacttctcatgactacagcag-cataag-ggtaact-gccccatgactc-------gtgactcaattacctcccacc-tgtccctcccaccacacat-ggggattatgggaactaaaattcaagatgagatttgggtggggacatgtccaaaccatatcaTCTAGA
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   61575 404 +     81800 TCATTCATATTTTTACATTCTAGTCta-ttagtcc-attcttatgctgctgt-gaaaacat-acccaagactgggtaatttataaaggaaag----tgacttaattgactcgc-gtggctggaaagg-cctcaggaaactt--acaatcctgactgaaggggaagcgaacccatccttcttcacaaaggggtaggagagagaac-tgctgagcaaa-gaagagaaag--c-cctttat-aaa--accatcagctctcatgagaacgca-ctcacttctcatgactacagcag-cataag-ggtaact-gccccatgactc-------gtgactcaattacctcccgcc-tgtccctcccaccacacgt-ggggattatgggaactaaaattcaagatgagatttgggtggggacatgtccaaaccatatcaTCTAGA
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  30755 404 -     95584 TCATTCATATTTTTACATTCTAGTCta-ttagtcc-attcttatgctgctgt-gaaaacat-acccaagactgggtaatttctaaaggaaag----tgacttaattgactcgc-gtggctggaaagg-cctcaggaaactt--acaatcctgactgaaggggaagcgaacccatccttcttcacaaaggggtaggagagagaac-tgctgagcaaa-gaagagaaag--c-cctttat-aaa--accatcagctctcatgagaacgca-ctcacttctcatgactacagcag-cataag-ggtaact-gccccatgactc-------gtgactcaattacctcccacc-tgtccctcccaccacacat-ggggattatgggaactaaaattcaagatgagatttgggtggggacatgtccaaaccatatcaTCTAGA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         54856 404 -    119600 TCATTCATATTTTTACATTCTAGTCta-ttagtcc-attcttatgctgctgt-gaaaacat-acccaagactgggtaatttataaaggaaag----tgacttaattgactcgc-gtggctggaaagg-cctcaggaaactt--acaatcctgactgaaggggaagcgaacccatccttcttcacaaaggggtaggagagagaac-tgctgagcaaa-gaagagaaag--c-cctttat-aaa--accatcagctctcatgagaacgca-ctcacttctcatgactacagcag-cataag-ggtaact-gccccatgactc-------gtgactcaattacctcccacc-tgtccctcccaccacacat-ggggattatgggaactagaattcaagatgagatttgggtggggacatgtccaaaccatatcaTCTAGA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    2190   9 -     12242 TTATTA--------------TGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 1
s Castor_canadensis.CasCan_scaffold_2074                    138539   9 +    179628 ATCTTC--------------TGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 1
s Cercocebus_atys.KQ010504.1                               4478430 379 +   4669795 ttattcatatttttatattctagtgta-ttagtcc-attctcatgctgcttt-gAAAACAT-ACTCaatactgtgtaatttataagggaaag----tgGCTTCATTGACTCACA-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcctGTCCTTCTTCACAAAGGGGTAGGAgagagaag-tgccgagcaaa-gaggggaaag--t-cctttaa-aaaa-accgtcagatctcatgagaattta-ctcact-atcacgagaacagcag-caTGAG-GGTAaat-gcccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccgtatcatctaga
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        2924 379 +     17872 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggcttcattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcatgtccttcttcacaaaggggtaggagagagaag-tgccgagcaaa-gaggggaaag--t-cctctaa-aaaa-accgtcagatctcatgagaattta-ctcact-atcatgagaacagcag-catgag-ggtaaat-gcccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gattcgggtggggacagagccaaaccatatcaTCTAGA
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           3519 379 -     14043 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggcttcattgactcata-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcctgtccttcttcacaaaggggtaggagagagaag-tgccgagcaaa-gaggggaaag--t-cctttaa-aaaa-actgtcagatctcatgagaattta-ctcact-atcacgagaacagcag-catgag-ggtaaat-gcccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccgtatcaTCTAGA
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          11614 379 +     27781 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggcttcattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcctgtccttcttcacaaaggggtaggagagagaag-tgccgagcaaa-gaggggaaag--t-cctttaa-aaaa-accgtcagatctcatgagaattta-ctcact-atcacgagaacagcag-catgag-ggtaaat-gcccc--------------atgattcaattacctcccactgggtccctcccagcacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        11761 378 -     20310 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggcttaattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcatgtccttcttcacaaaggggtaggagagagaag-tgccgagcaaa-gaggggaaag--t-cccttaa-aaa--cccatcagatcttgtgagaattta-ctcact-atctcgagaacagcag-cgtgag-ggtaact-gcccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatgtcaTCTAGA
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          14741 378 +     29689 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggcttaattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcatgtccttcttcacaaaggggtaggagagagaag-tgccgagcaaa-gaggggaaag--t-cccttaa-aaa--cccatcagatcttgtgagaattta-ctcact-atctcgagaacagcag-cgtgag-ggtaact-gcccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatgtcaTCTAGA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            9497 378 -     20078 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggcttaattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcatgtccttcttcacaaaggggtaggagagagaag-tgccgagcaaa-gaggggaaag--t-cccttaa-aaa--cccatcagatcttgtgagaattta-ctcact-atctcgagaacagcag-cgtgag-ggtaact-gcccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatgtcaTCTAGA
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          17413 377 -     27936 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttgtaagggaaag----tggcttaattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcatgtcct-cttcacaaaggggcaggagagagaag-tgccgagcaaa-gaggggaaag--t-cccttaa-aaa--cccatcagatcttgtgagaattta-ctcact-atctcgagaacagcag-cctgag-ggtaact-gcccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatgtcaTCTAGA
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            6281 378 -     17152 TTATTCATATTTTTATATTCTAGtgta-ttactcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggcttaattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaacgtgaagcaagcatgtccttcttcacaaaggggtaggagagagaag-tgccgagcaaa-gaggggaaag--t-cccttaa-aaa--cccatcagatcttgtgagaattta-ctcact-atctcgagaacagcag-cgtgag-ggtaact-gcccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatgtcaTCTAGA
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826011 378 +  39242232 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgatgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggcttaattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcatgtccttcttcacaaaggggtaggagagagaag-tgccgagcaaa-gacgggaaag--t-cccttaa-aaa--cccatcagatcttgtgagaattta-ctcact-atctcgagaacagcag-cgtgag-ggtaact-gcccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatgtcaTCTAGA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21225515 378 -  21565898 TTATTCATATTTTTATATTCTAGtgta-ttactcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggcttaattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaacgtgaagcaagcatgtccttcttcacaaaggggtaggagagagaag-tgccgagcaaa-gaggggaaag--t-cccttaa-aaa--cccatcagatcttgtgagaattta-ctcact-atctcgagaacagcag-cgtgag-ggtaact-gcccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatgtcaTCTAGA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       42635 377 -     53127 TTATTCATATTTTTATATTCTAGtgta-ttactcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggcttaattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaacgggaagcaagcatgtccttcttcacaaaggggtaggagagagaag-tgccgagcaaa-gaggggaaag--t-cccttaa-aaa--cccatcagatcttgtgagaattta-ctcact-atctcgagaacagcag-catgag-ggtaact-gcccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagc-aaaccatgtcaTCTAGA
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        2884 378 +     13442 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagagaaag----tggcttaattgactcaca-tgcctgggaagg-cctcaggaaactt--acattgatgactgaaggggaagcaagcatgtccttcttcacaaaggggtaggagagagaag-tgccgagcaaa-gaggggaaag--t-cccttaa-aaa--cccatcagatcttgtgagaattta-ctcact-atctcaagaacagcag-cgtgag-ggtaact-gcccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatgtcaTCTAGA
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       17430 378 -     27947 TTATTCATATTTTTATATTCTAGtgta-ttactcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggcttaattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaacgggaagcaagcatgtccttcttcacaaaggggtaggacagagaag-tgccgagcaaa-gaggggaaag--t-cccttaa-aaa--cccatcagatcttgtgagaattta-ctcact-atcttgagaacagcag-cgtgag-ggtaact-gcccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatgtcaTCTAGA
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                          459 378 +     10558 TTATTCATATTTTTATATTCTAGtgta-ttactcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttaaaagggaaag----tggcttaattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcatgtccttcttcacaaaggggtaggagagagaag-tgccgagcaaa-gaggggaaag--t-cccttaa-aaa--cccatcagatcttgtgagaattta-ctcact-atctcgagaacagcag-tgtgag-ggtaact-gcccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatgtcaTCTAGA
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          3464 378 +     14005 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggcttaattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcatgtccttcttcacaaaggggtaggagagagaag-tgccgagcaaa-gaggggaaag--t-cccttaa-aaa--cccatcagatcttgtgagaattta-ctcact-atctcgagaacagcag-cgtgag-ggtaact-gcccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatgtcaTCTAGA
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                                686 396 -     17098 GTATTCATATTTTTATATTCTAGTCta-ttagtcc-gttcttatgctgatat-gaaaacat-acccaagactgggtaatttataaaggaaag----tgacttaattgactcgtg-tggctggaaagg-cctcaggaaactt--acagtcatgactgaaggggaagcaaacccatccttcttcacaaaggggtaggagagagaag-tgctgagcaca-gaagggaaag--c-cctttat-aaa--accatcagctctcatgagaatgtg-cttgctcatcgggagaacagcag-catgag-gggaact-gccc---------------gtgattcaatcgcctcccacc-tgcccctcccaccacacgt-ggggattatgggaactaaaattcaagatgagatttgggtggggacatgtccaaaccatatcaTCTAGA
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                               562 396 +     17877 GTATTCATATTTTTATATTCTAGTCtg-ttagtcc-gttcttatgctgatat-gaaaacat-acccaagactgggtaatttataaaggaaag----tgacttaattgactcgtg-tggctggaaagg-cctcaggaaactt--acagtcatgactgaaggggaagcaaacccatccttcttcacaaaggggtaggagagagaag-tgctgagcaca-gaagggaaag--c-cctttat-aaa--accatcagctctcatgagaatgtg-cttgctcatcgggagaacagcag-catgag-gggaact-gccc---------------gtgattcaattgcctcccacc-tgcccctcccaccacacgt-ggggattatgggaactaaaattcaagatgagatttgggtggggacatgtccaaaccatatcaTCTAGA
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            158129 396 -    216457 GTATTCATATTTTTATATTCTAGTCta-ttagtcc-gttcttatgctgatat-gaaaacat-acccaagactgggtaatttataaaggaaag----tgacttaattgactcgtg-tggctggaaagg-cctcaggaaactt--acagtcatgactgaaggggaagcaaacccatccttcttcacaaaggggtaggagagagaag-tgctgagcaca-gaagggaaag--c-cctttat-aaa--accatcagctctcatgagaatgtg-cttgctcatcgggagaacagcag-catgag-gggaact-gccc---------------gtgattcaatcgcctcccacc-tgcccctcccaccacacgt-ggggattatgggaactaaaattcaagatgagatttgggtggggacatgtccaaaccatatcaTCTAGA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          62604 396 +     76511 GTATTCATATTTTTATATTCTAGTCta-ttagtcc-gttcttatgctgatat-gaaaacat-acccaagactaggtaatttataaaggaaag----tgacttaattgactcgtg-tggctggaaagg-cctcaggaaactt--acagtcatgactgaaggggaagcaaacccatccttcttcacaaaggggtaggagagagaag-tgctgagcaca-gaagggaaag--c-cctttat-aaa--accatcagctctcatgagaatgtg-cttgctcatcgggagaacagcag-cattag-gggaact-gccc---------------gtgattcaatcgcctcccacc-tgcccctcccaccacacgt-ggggattatgggaactaaaattcaagatgagatttgggtggggacatgtccaaaccatatcaTCTAGA
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254112   6 +   2543920 ---tta--------------tgt------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Chinchilla_lanigera.JH722012.1                         I 3 I 1
s Chiropotes_israelita.k141_747660                           99192 411 +    146308 TTATTCATATTTTTACATTCTAGTCta-ttagtcc-attcttacgctgctgt-gaaaacat-acccaagactgggtaatttataaaggagag----tgacttaattgactcgc-gtggctggaaagg-cctcaggaaactt--acaatcctcactgaaggggaagcaaacccatccttcttcacaaaggggtaggagagagaac-tgctgagcaaa-gaaggcaaag--c-cctttat-aaa--accatcagctctcatgagaaccca-ctcacttctcatgactacagcag-cataag-ggtaact-gccccatgactcgtgactcgtgactcaattacctcccacc-tgtccctcccaccacacat-ggggattatgggaactaaaattcaagagaagatttgggtggggacatgtccaaaccatatcaTCTAGA
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          31000 411 -     50570 TTATTCATATTTTTACATTCTAGTCta-ttagtcc-attcttacgctgctgt-gaaaacat-acccaagactgggtaatttataaaggagag----tgacttaattgactccc-gtggctggaaagg-cctcaggaaactt--acaatcctcactgaaggggaagcaaacccatccttcttcacaaaggggtaggagagagaac-tgctgagcaaa-gaaggcaaag--c-cctttat-aaa--accatcagctctcatgagaaccca-ctcacttctcatgactacagcag-cataag-ggtaact-gccccatgactcgtgactcgtgactcaattacctcccacc-tgtccctcccaccacacat-ggggattatgggaactaaaattcaagaggagatttgggtggggacatgtccaacccatatcaTCTAGA
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18431334 378 -  18827391 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggcttaattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcatgtccttcttcacaaaggggcaggagagagaag-tgccaagcaaa-gaggggaaag--t-cccttaa-aaa--cccatcagatcttgtgagaattta-ctcact-atctcgagaacagcag-cgtgag-ggtaact-gcccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       17840 378 -     50209 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggcttaattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaagggaagcaagcatgtccttcttcacaaaggggcaggagagagaag-tgccaagcaaa-gaggggaaag--t-cccttaa-aaa--cccatcagatcttgtgagaattta-ctcact-atctcgagaacagcag-cgtgag-ggtaact-gcccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135424839 378 + 135778131 ttattcatatttttatattctagtgta-ttagtcc-attctcatgctgcttt-gAAAACAT-ACTCaatactgtgtaatttataagggaaag----tggcttaattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcatgtccttcttcacaaaggggcaggagagagaag-tgccaagcaaa-gaggGGAAAG--T-CCCTtaa-aaa--cccatcagatcttgtgagaattta-CTCACT-ATCTCGAGAACAGCAG-CGTGAG-ggtaact-gcccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcatctaga
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1913340 378 +   2368649 ttattcctatttttatattctagtgta-ttagtcc-attctcatgctgcttt-gAAAACAT-ACTCaatactgtgtaatttataagggaaag----tggcttaattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcatgtccttcttcacaaaggggtaggagagagaag-tgccaaaCAAA-GAGGGGAAAG--T-cccttaa-aaa--accatcagatctcgtgagaattta-ctcact-atcgcgagaacagcag-catgag-ggtaact-gcccc--------------atgattcaattacctcccgctgggtccctcccaccacacat-ggggattacgg-------------------gatttgggtggggacagagccaaaccatatcatccagA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199951589 378 + 200372422 TTATTCCTATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggcttaattgactcaca-tgcctgggaagg-cctcaggaaactt--acgctgatgactgaaggggaagcaagcatgtccttcttcacaaaggggtaggagagagaag-tgccaaacaaa-gaggggaaag--t-cccttaa-aaa--accatcagatctcgtgagaattta-ctcact-atcgcaagaacagcag-catgag-ggtaact-gcccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattacgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              39865 378 +     84244 TTATTCCTATTTTTATATTCCAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggcttaattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcatgtccttcttcacaaaggggtaggagagagaag-tgccaaacaaa-gaggggaaag--t-cccttaa-aaa--accatcagatctcatgagaattta-ctcact-atcgcgagaacagcag-catgag-ggtaact-gcccc--------------atgattcaatcacctcccgctgggtccctcccaccacacat-ggggattacgg-------------------gatttgggtggggacagagccaaaccatatcaTCCAGA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 51801   9 +     63868 CTAGTA--------------AGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 1
s Ctenodactylus_gundi.CteGun_scaffold_65                    838296   9 +   1526836 CTGTTT--------------TTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 8
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37062   9 +     51376 TTGTTA--------------TGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 1
s Dinomys_branickii.DinBra_scaffold_21862                    37604   9 +     67921 TTGTTA--------------TGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 1
s Ellobius_lutescens.LOEQ01008920.1                          22317   9 -    110024 atattt--------------aat------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 1
s Ellobius_talpinus.LOJH01081419.1                            2223   9 +      8657 ATATTT--------------AGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Ellobius_talpinus.LOJH01081419.1                       C 0 I 1
s Erythrocebus_patas.Contig38                             21208007 378 -  21539334 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggcttaattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcctgtccttcttcacaaaggggtaggagagagaag-tgccgagcaaa-gaggggaaag--t-cccttaa-aaa--cccatcagatcttgtgagagttta-ctcact-atctcgagaacagcag-cgtgag-ggtaact-gcccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatgtcaTCTAGA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Fukomys_damarensis.KN121974.1                             851625   9 +   3816255 TTGTGA--------------TGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Fukomys_damarensis.KN121974.1                          C 0 I 1
s Galeopterus_variegatus.GalVar_scaffold_108840               2709  22 -      9135 GTATTTGTATTTG-ATATTCTAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 I 1
s Glis_glis.GliGli_scaffold_19807                            32170   8 +     49224 ATATTT--------------TA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              18818 401 -     32273 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaagactgggtaatttataagggaaagtttttgtctcaattgactcaca-tggctgggaagg-cctcaggaaactt--acaatcatggctgaaggggaagcaagcacgtccttcttcacaaaggggtaggagagagaag-tgcctagcaaa-gaggggaaag--c-cccttat-aca--accatgaggtttcatgagaattta-ctcact-atcttgagaacagcag-cataag-ggtaact-gcccc--------------atgattcaatcacctcccaccaggtccctcccaccacacat-ggggattatgggaactaaaattcaagattagatttgggtggggacagagccaaaccatatcaTCTAGA
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578336.1                              33190422 401 -  33314783 ttattcatatttttatattctagtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaagactgggtaatttataagggaaagtttttgtctcaattgactcaca-tggctgggaagg-cctcaggaaactt--acaatcatggctgaaggggaagcaagcacgtccttcttcacaaaggggtaggagagagaag-tgcctagcaaa-gaggggaaag--c-cccttat-aca--accatgaggtttcatgagaattta-ctcact-atcttgagaacagcag-cataag-ggtaact-gcccc--------------atgattcaatcacctcccaccaggtccctcccaccacacat-ggggattatgggaactaaaattcaagattagatttgggtggggacagagccaaaccatatcatctaga
i Gorilla_gorilla.LT578336.1                             I 1703 I 248
s Graphiurus_murinus.GraMur_scaffold_10447                   33849   9 +     78134 ACATTT--------------TAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 1
s Heterocephalus_glaber.JH602082.1                        20663409   9 +  22651954 TTGTGG--------------TGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Heterocephalus_glaber.JH602082.1                       C 0 I 1
s Hoolock_leuconedys.ctg274                                    437622 397 +    630532 GTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcctt-aaaaacat-actcaagactgggtaattgataagggaaag----tggtttaattgactcaca-tgcctgggaagg-cctcaggaaactt--acaatcatggctgaaggggaagcaagcacgtccttcttcacaaagggataggagagagaag-tgcctagcaaa-gaggggaaag--c-cccttat-aca--accatcagttctcatgagaattta-ctcact-atcttgagaacagcag-catgag-ggtaact-gcccc--------------atgattcaattacatcccaccaggtccctcccaccacacat-ggggattatgggaactaaaattcaagattagatttgggtggggagagagccaaaccatatcaTTTAGA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84298   9 +    135385 TTGTTA--------------TGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 1
s Ictidomys_tridecemlineatus.JH393364.1                    7522193   9 -   7955117 TTATCT--------------TAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 1
s Jaculus_jaculus.JH725527.1                               8278359   9 -   9596543 AGATTT--------------AAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Jaculus_jaculus.JH725527.1                             C 0 I 1
s Lagothrix_lagothricha.k141_1005387                         15287 376 -     38430 ----------------------gtcta-ttagtcc-attctcatgctgctat-gaaaacat-acccaagactgggtaatttataaaggaaag----tgatttaattgactcac-gtggctggaaagg-cctcaggaaactt--acaatcatgactgaaggggaagcaaacacgtccttcttcacaaaggggtaggagagagaag-tgctgagcaaa-aaagggaaag--c-cctttat-aaa--accatcagatcttatgagaaggta-ctcacttatcatgagaacagcag-cataag-ggtaact-gcccc-t------------gtgattcaattacctcccacc-tgtccctcccgccacgcat-ggggattatgggaactaaaattcaggatgagatttgggtggggacatggccaaaccatagcaTCTAGA
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     7986   3 -     14121 --------------------TAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Lepus_americanus.LepAme_scaffold_107385                I 2 I 1
s Lophocebus_aterrimus.ctg367                              1439972 379 +   1826925 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggcttcattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcatgtccttcttcacaaaggggtaggagagagaag-tgccgagcaaa-gaggggaaag--t-cctttaa-aaaa-accgtcagatctcatgagaattta-ctcact-atcacgagaacagcag-catgag-ggtaaat-gcccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                               9781 380 +     40492 TTATCCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggcttcattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcatgtccttctccacaaaggggtaggagagagaag-tgccgagcaaa-gaggggaaag--t-cctttaaaaaaa-actgtcagatctcatgagaattta-ctcact-atcacgagaacagcag-catgag-ggtaaat-gcccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679035 380 +  60120075 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggcttcattgactaaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcatgtccttctccacaaaggggtaggagagagaag-tgccgagcaaa-gaggggaaag--t-cctttaaaaaaa-actgtcagatctcatgagaattta-ctcact-atcacgagaacagcag-catgag-ggtaaat-gtccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 15553 379 -     26193 TTATTCAT-TTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggcttcattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcatgtccttctccacaaaggggtaggagagagaag-tgccgagcaaa-gaggggaaag--t-cctttaa-aaaaaactgtcagatctcatgagaattta-ctcact-atcacgagaacagcag-catgag-ggtaaat-gtccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            83329 379 -    114318 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggcttcattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcatgtccttctccacaaaggggtaggagagagaag-tgccgagcaaa-gaggggaaag--t-cctttaa-aaaa-accgtcagatctcatgagaattta-ctcact-atcacgagaacagcag-catgag-ggtaaat-gcccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9020 379 -     23192 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggcttcattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcatgtccttctccacaaaggggtaggagagagaag-tgccgagcaaa-gagaggaaag--t-cctttaa-aaaa-accgtcagatctcatgagaattta-ctcact-atcacgagaacagcag-catgag-ggtaaat-gcccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                18484 379 -     29190 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggcttcattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcatgtccttctccacaaaggggtaggagagagaag-tgccgagcaaa-gaggggaaag--t-ccttta--aaaaaaccgtcagatctcatgagaattta-ctcact-atcacgagaacagcag-catgag-ggtaaat-gcccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27062 379 +     37952 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggcttcattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcatgtccttctccacaaaggggtaggagagagaag-tgccgagcaaa-gaggggaaag--t-ccttta--aaaaaaccgtcagatctcatgagaattta-ctcact-atcacgagaacagcag-catgag-ggtaaat-gcccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842141 379 + 187317192 ttattcatatttttatattctagtgta-ttagtcc-attctcatgctgcttt-gAAAACAT-ACTCaatactgtgtaatttataagggaaag----tgGCTTCATTGACTCACA-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcatgtccttCTCCACAAAGGGGTAGGAgagagaag-tgccgagcaaa-gaggggaaag--t-cctttaa--aaaaaccatcagatctcatgagaattta-ctcact-atcacaagaacagcag-catgag-GGTAaat-gcccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcatctaga
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25460717 379 -  25927173 ttattcatatttttatattctagtgta-ttagtcc-attctcatgctgcttt-gAAAACAT-ACTCaatactgtgtaatttataagggaaag----tgGCTTCATTGACTCACA-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcatgtccttCTCCACAAAGGGGTAGGAgagagaag-tgccgagcaaa-gaggggaaag--t-ccttta--aaaaaaccgtcagatctcatgagaattta-ctcact-atcacgagaacagcag-caTGAG-GGTAaat-gcccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcatctaga
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  82918 379 +     89720 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggcttcattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcatgtccttctccacaaaggggtaggagagagaag-tgccgagcaaa-gaggggaaag--t-ccttta--aaaaaaccgtcagatctcatgagaattta-ctcact-atcacgagaacagcag-catgag-ggtaaat-gcccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                 9911 379 +     20474 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggcttcattgactaaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcatgtcctcctccacaaaggggtaggagagagaag-tgctgagcaaa-gaggggaaag--t-cctttaa-aaaa-accgtcagatctcatgagaattta-ctcact-atcacgagaacagcag-catgag-ggtaaat-gtccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                   9708 379 -     14993 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggcttcattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcatgtccttctccacaaaggggtaggagagagaag-tgccgagcaaa-gaggggaaag--t-ccttta--aaaaaaccgtcagatctcatgagaattta-ctcact-atcacgagaacagcag-catgag-ggtaaat-gcccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  332570 379 -    668171 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggcttcattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcatgtccttcttcacaaaggggtaggagagagaag-tgccgagcaaa-gaggggaaag--t-ccttta--aaaaaaccgtcagatctcatgagaattta-ctcact-atcacgagaacagcag-catgag-ggtaaat-gcccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8020 379 -     24072 TTATCCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggcttcattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcatgtccttctccacaaaggggtaggagagagaag-tgccgagcaaa-gaggggaaag--t-cctttaa-aaaa-accgtcagatctcatgagaattta-ctcact-atcacgagaacagcag-catgag-ggtaaat-gcccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGa
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               28651 379 -     45290 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggcttcattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcatgtccttctccacaaaggggtaggagagagaag-tgccgagcaaa-gaggggaaag--t-ccttta--aaaaaaccgtcagatctcatgagaattta-ctcact-atcacgagaacagcag-catgag-ggtaaat-gcccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23940243 375 -  24302211 TTATTCATATTTCTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggcttcattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcctgtccttcttcacaaaggggtaggagagagaag-tgccgagcaaa-gaggggaaag--t-cctttaa-aaaa-accgtcagatctcatgaaaattta-ct-----atcacgagaacagcag-catgag-ggtaaat-gcccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaACTAGA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354355 379 +    752769 TTATTCATATTTCTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggcttcattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcctgtccttcttcacaaaggggtagcagagagaag-tgccgagcaaa-gaggggaaag--t-cctttaa-aaaa-accgtcagatctcatgaaaattta-ctcact-atcacgagaacagcag-catgag-ggtaaat-gcccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33104480   9 -  40650429 TTATCT--------------TAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Marmota_marmota.CZRN01000018.1                         C 0 I 1
s Meriones_unguiculatus.MerUng_scaffold_7390                 34551   9 +    140813 ACATTT--------------AGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 1
s Mesocricetus_auratus.KB708134.1                         12184022   9 -  29670104 ATAGTT--------------GGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Mesocricetus_auratus.KB708134.1                        C 0 I 1
s Microtus_ochrogaster.CM001695.1                         11262299   9 -  27267610 atattt--------------agt------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Microtus_ochrogaster.CM001695.1                        C 0 I 1
s Miopithecus_ogouensis.k141_534055                          11916 378 -     28506 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-ggaaacat-actcaatactgtgtaatttataagggaaag----tggcttaattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcctgtccttcttcacaaaggggtaggagagagaag-tgccgagcaaa-gaggggaaag--t-cccttaa-aaa--cccatcagatcttgtgagaattta-ctcact-atctcgagaacagcag-cgtgag-ggtaact-gcccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mus_caroli.LT608237.1                                   84362932   9 - 120012414 tcattt--------------agt------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Mus_caroli.LT608237.1                                  C 0 I 1
s Mus_musculus.chr8                                       87652431   9 - 129401213 tcatTT--------------AGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Mus_musculus.chr8                                      C 0 I 1
s Mus_pahari.LT608297.1                                   31357165   9 -  89631738 tcGTTT--------------Agt------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Mus_pahari.LT608297.1                                  C 0 I 1
s Mus_spretus.CM004101.1                                  90754922   9 - 130317789 tcattt--------------agt------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Mus_spretus.CM004101.1                                 C 0 I 1
s Myocastor_coypus.MyoCoy_scaffold_10123                     72372   9 -     80779 TTATTA--------------TGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 I 1
s Nannospalax_galili.KL204047.1                            2036735   9 -   3037898 ACATTT--------------AAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Nannospalax_galili.KL204047.1                          C 0 I 1
s Nasalis_larvatus.k141_413338                               17972 378 +     21681 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggtttcattgactcaca-tgcctgggaagg-cctgaggaaactt--acactgatgactgaaggggaagcaagtatgtccttcttcacaaagcggtaggagagagaag-tgctgagcaaa-gaggggaaag--t-cccttaa-aaa--accatcagatctcgtgagaattta-ctcact-atcacaagaacagcag-catgag-ggtaact-gcccc--------------atgattcaattacctcccactgggtccctgccaccgcacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Ochotona_princeps.JH802162.1                             1365429   3 +   3988456 --------------------taa------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Ochotona_princeps.JH802162.1                           I 2 I 1
s Ondatra_zibethicus.OndZib_scaffold_46174                   26938   9 +     28053 ATATTT--------------AGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 1
s Onychomys_torridus.OnyTor_scaffold_2986                    81951   9 +    102263 ATATTT--------------TGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 1
s Oryctolagus_cuniculus.CM000791.1                        67148887   3 + 174332312 --------------------tag------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Oryctolagus_cuniculus.CM000791.1                       I 2 I 1
s Pan_paniscus.KQ411613.1                                    46920 400 +     80009 ctattcatatttttatattctagtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaagactgggtaatttataa-ggaaagttTTTGTCTTAATTGACTCACA-TGGCTGGgaatg-cctcaggaaactt--acaatcatggctgaaggggaagcaagcacgtccTTCTTCACAAAGGAGTAGGAGAGAGAAG-TGCCTAGCAAa-gaggggaaag--c-cccttat-aca--ACCATCAGGTTTCATGAGAATTTa-ctcact-atcttgagaacagcag-cataag-ggtaact-gcccc--------------atgattcaattacctcccaccaggtccctcccaccacacat-ggggattatgggaactaaaattcaagattagatttgggtggggacagagccaaaccatatcatctaga
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.KZ622849.1                                 25109 400 +    110857 ttattcatatttttatattctagtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaagactgggtaatttacaa-ggaAAGTTTTTGTCTTAATTGactcaca-tggctgggaagg-cctcaggaaactt--acaatcatggctgaaggggaagcaagcacgtccTTCTTCACAAAGGGGTAGGAGAGAGAAG-TGCCTAGCAAa-gaggggaaag--c-cccttat-aca--ACCATCAGGTTTCATGAGAATTTa-ctcact-atcttgagaacagcag-cataag-ggtaact-gcccc--------------atgattcaattacctcccaccaggtccctcccaccacacat-ggggattatgggaactaaaattcaagattagatttgggtggggacagagccaaaccatatcatctaga
i Pan_troglodytes.KZ622849.1                             I 20 I 130
s Papio_anubis.CM001495.2                                183446045 379 + 183742232 ttattcatatttttatattctagtgta-ttagtcc-attctcatgctgcttt-gAAAACAT-ACTCaatactgtgtaatttataagggaaag----tgGCTTCATTGACTCACA-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcatgtccttcttcacaaaggggtaggagagagaag-tgccgagcaaa-gaggggaaag--t-cctttaa-aaaa-accatcagatctcatgagaattta-ctcact-atcacgagaacagcag-caTGAG-GGTAaat-gcccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcatctaga
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                             9695 379 +     20448 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggcttcattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcatgtccttcttcacaaaggggtaggagagagaag-tgccgagcaaa-gaggggaaag--t-cctttaa-aaaa-accgtcagatctcatgagaattta-ctcact-atcacgagaacagcag-catgag-ggtaaat-gtccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20566503 379 +  20919399 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggcttcattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcatgtccttcttcacaaaggggtaggagagagaag-tgccgagcaaa-gaggggaaag--t-cctttaa-aaaa-accgtcagatctcatgagaattta-ctcact-atcacgagaacagcag-catgag-ggtaaat-gtccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   8435 379 +     41871 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggcttcattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcatgtccttcttcacaaaggggtaggagagagaag-taccgagcaaa-gaggggaaag--t-cctttaa-aaaa-accgtcagatctcatgagaattta-ctcact-atcacgagaacagcag-catgag-ggtaaat-gcccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    11728 379 +     27711 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggcttcattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcatgtccttcttcacaaaggggtaggagagagaag-tgccgagcaaa-gaggggaaag--t-cctttaa-aaaa-accgtcagatctcatgagaattta-ctcact-atcacgagaacagcag-catgag-ggtaaat-gcccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  2727 379 -     11374 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggcttcattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcatgtccttcttcacaaaggggtaggagagagaag-tgccgagcaaa-gaggggaaag--t-cctttaa-aaaa-accgtcagatctcatgagaattta-ctcact-atcacgagaacagcag-catgag-ggtaaat-gcccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Papio_ursinus.k141_5274964                             C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18196579   9 -  18517816 atattt--------------agt------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Peromyscus_maniculatus.KI615324.1                      C 0 I 1
s Petromus_typicus.PetTyp_scaffold_42190                     29346   6 -     29689 ---TTA--------------TAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Petromus_typicus.PetTyp_scaffold_42190                 I 24 I 1
s Piliocolobus_badius.k141_1142974                            1044 378 +     68526 TTATTCCTATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggcttaattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcatgtccttcttcacaaaggggtaggagagagaag-tgccaaacaaa-gaggggaaag--t-cccttaa-gaa--accatcagatctcgtgagaattta-ctcact-atcacgagaacagcag-catgag-ggtaact-gcccc--------------atgattcaattacctcccacggggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        41190 378 +     89929 TTATTCCTATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggcttaattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcatgtccttcttcacaaagaggtaggagagagaag-tgccaaacaaa-gaggggaaag--t-cccttaa-gaa--accatcagatctcgtgagaattta-ctcact-atcacgagaacagcag-catgag-ggtaact-gcccc--------------atgattcaattacctcccacggggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            42604 378 +     51399 TTATTCCTAGTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggcttaattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcatgtccttcttcacaaagaggtaggagagagaag-tgccaaacaaa-gaggggaaag--t-cccttaa-gaa--accatcagatctcgtgagaattta-ctcact-atcacgagaacagcag-catgag-ggtaact-gcccc--------------atgattcaattacctcccacggggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14298841 378 -  14605196 ttattcctatttttatattctagtgta-ttagtcc-attctcatgctgcttt-gAAAACAT-ACTCAATACTgtgtaatttataagggaaag----tggcttaattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcatgtccttcttcacaaaggggtaggagagagaag-tgccaaaCAAA-GAGGGGAAAG--T-CCCTTaa-gaa--accatcagatctcgtgagaattta-ctcact-atcacgagaacagcag-catgag-ggtaact-gcccc--------------atgattcaattacctcccacggggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcatctagA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1476471                              4461 404 +     26961 TTATTCATATTTTTACATTCTAGTCta-ttagtcc-attcttatgctcctat-gaaaacat-acccaagactgggtaatttacaaaggaaag----tgacttaattgacttgcg-tggctggaaagg-cctcaggaaactt--acaatcctgaccaaaggggaagcaaacccatccttcttcacaaaggggtaggagcgagaac-tgctgagcaaa-gaagggaaag--c-cctttat-aaa--accatcagctctcatgagaacgca-ctcacttctcatgagtacagcag-cataag-ggtaact-gccccatgactc-------gtgactcaattacctcccacc-tgtccctcccaccacacat-ggggattacgggaactaaaattcaagatgagatttgggtggggacatgtccaaaccatatcaTCTAGA
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                           606 404 +     23417 TTATTCATATTTTTACATTCTAGTCta-ttagtcc-attcttatgctcctat-gaaaacac-acccaagactgggtaatttacaaaggaaag----tgactaaattgacttgcg-tggctggaaagg-cctcaggaaactt--acaatcctgaccgaaggggaagcaaacccacccttcttcacaaaggggtaggagcgagaac-tgctgagcaaa-gaagggaaag--c-cctttat-aaa--accatcagctctcatgagaacgca-ctcacttctcatgagaacagcag-cataag-ggtaact-gccccatgactc-------gtgactcaattacctcccacc-tgtccctcccaccacgcat-ggggattacgggaactaaaattcaagatgagatttgggtggggacatgtccaaaccatatcaTCTAGA
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                4453 404 +     29694 TTATTCATATTTTTACATTCTAGTCta-ttagtcc-attcttatgctcctat-gaaaacat-acccaagactgggtaatttacaaaggaaag----tgacttaattgacttgcg-tggctggaaagg-cctcaggaaactt--acaatcctgaccaaaggggaagcaaacccatccttcttcacaaaggggtaggagcgagaac-tgctgagcaaa-gaagggaaag--c-cctttat-aaa--accatcagctctcatgagaacgca-ctcacttctcatgagtacagcag-cataag-ggtaact-gccccatgactc-------gtgactcaattacctcccacc-tgtccctcccaccacacat-ggggattacgggaactaaaattcaagatgagatttgggtggggacatgtccaaaccatatcaTCTAGA
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          29479 404 +     52772 TTATTCATATTTTTACATTCTAGTCta-ttagtcc-attcttatgctcctat-gaaaacat-acccaagactgggtaatttacaaaggaaag----tgacttaattgacttgcg-tggctggaaagg-cctcaggaaactt--acaatcctgaccaaaggggaagcaaacccatccttcttcacaaaggggtaggagcgagaac-tgctgagcaaa-gaagggaaag--c-cctttat-aaa--accatcagctctcatgagaacgca-ctcacttctcatgagtacagcag-cataag-ggtaact-gccccatgactc-------gtgactcagttacctcccacc-tgtccctcccaccacacat-ggggattacgggaactaaaattcaagatgagatttgggtggggacatgtccaaaccatatcaTCTAGA
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           4475 404 +     26198 TTATTCATATTTTTACATTCTAGTCta-ttagtcc-attcttatgctcctat-gaaaacat-acccaagactgggtaatttacaaaggaaag----tgacttaattgacttgcg-tggctggaaagg-cctcaggaaactt--acaatcctgaccaaaggggaagcaaacccatccttcttcacaaaggggtaggagcgagaac-tgctgagcaaa-gaagggaaag--c-cctttat-aaa--accatcagctctcatgagaacgca-ctcacttctcatgagtacagcag-cataag-ggtaact-gccccatgactc-------gtgactcagttacctcccacc-tgtccctcccaccacacat-ggggattacgggaactaaaattcaagatgagatttgggtggggacatgtccaaaccatatcaTCTAGA
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3941024 403 +   4542175 TTATTCATATTTTTACATTCTAGTCta-ttagtcc-attcttatgctcctat-gaaaacac-acccaagactgggtaatttacaaaggaaag----tgactaaattgacttgc--tggctggaaagg-cctcaggaaactt--acaatcctgaccgaaggggaagcaaacccacccttcttcacaaaggggtaggagcgagaac-tgctgagcaaa-gaagggaaag--c-cctttat-aaa--accatcagctctcatgagaacgca-ctcacttctcatgagaacagcag-cataag-ggtaact-gccccatgactc-------gtgactcaattacctcccacc-tgtccctcccaccacacat-ggggattacgggaactaaaattcaagatgagatttgggtggggacatgtccaaaccatatcaTCTAGA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            4439 404 -     23490 TTATTCATATTTTTACATTCTAGTCta-ttagtcc-attcttatgctcctat-gaaaacat-acccaagactgggtaatttacaaaggaaag----tgacttaattgacttgcg-tggctggaaagg-cctcaggaaactt--acaatcctgaccaaaggggaagcaaacccatccttcttcacaaaggggtaggagcgagaac-tgctgagcaaa-gaagggaaag--c-cctttat-aaa--accatcagctctcatgagaacgca-ctcacttctcatgagtacagcag-cataag-ggtaact-gccccatgactc-------gtgactcaattacctcccacc-tgtccctcccaccacacat-ggggattacgggaactaaaattcaagatgagatttgggtggggacatgtccaaaccatatcaTCTAGA
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8702 397 -     39866 GTATTCATATTTTTATATTCTAGTCta-ttagtcc-attcttatgctgctat-gaaaacat-acccaagactgggtaatttataaaggaaag----tgacttaattgactcgtg-tggctggaaagg-cctcaggaaactt--acagtcatgactgaaggggaagcaaacccatccttcttcacaaaggggtaggagagagaag-tgctgagcaca-gaatggaaag--c-cctttat-aaa--gccatcagctctcatgagaatgtg-ctcgctcatcaggagaacagcag-catgag-ggtcactccccc---------------gtgattcaatcgcctcccacc-tgtccctcccaccacacgt-ggggattatgggaactaaaattcaagatgagatttagggggagacatgtccaaaccatatcaTCTAGA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        17868 397 +     34906 GTATTCATATTTTTATATTCTAGTCta-ttagtcc-attcttatgctgctat-gaaaacat-acccaagactgggtaatttataaaggaaag----tgacttaattgactcgtg-tggctggaaagg-cctcaggaaactt--acagtcatgactgaaggggaagcaaacccagccttcttcacaaaggggtaggagagagaag-tgctgagcaca-gaatggaaag--c-cctttat-aaa--gccatcagctctcatgagaatgtg-ctcgctcatcaggagaacagcag-catgag-ggtcactccccc---------------gtgattcaatcgcctcccacc-tgtccctcccaccacacgt-ggggattatgggaactaaaattcaagatgagatttggggggggacatgtccaaaccatatcaTCTAGA
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       22132 397 +     87950 GTATTCATATTTTTATATTCTAGTCta-ttagtcc-attcttatgctgctat-gaaaacat-acccaagactgggtaatttataaaggaaag----tgacttaattgactcgtg-tggctggaaagg-cctcaggaaactt--acagtcatgactgaaggggaagcaaacccagccttcttcacaaaggggtaggagagagaag-tgctgagcaca-gaatggaaag--c-cctttat-aaa--gccatcagctctcatgagaatgtg-ctcgctcatcaggagaacagcag-catgag-ggtcactccccc---------------gtgattcaatcgcctcccacc-tgtccctcccaccacatgt-ggggattatgggaactaaaattcaagatgagatttggggggggacatgtccaaaccatatcaTCTAGA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     22959 397 +     88961 GTATTCATATTTTTATATTCTAGTCta-ttagtcc-attcttatgctgctat-gaaaacat-acccaagactgggtaatttataaaggaaag----tgacttaattgactcgtg-tggctggaaagg-cctcaggaaactt--acagtcatgactgaaggggaagcaaacccagccttcttcacaaaggggtaggagagagaag-tgctgagcaca-gaatggaaag--c-cctttat-aaa--gccatcagctctcatgagaatgtg-ctcgctcatcaggagaacagcag-catgag-ggtcactccccc---------------gtgattcaatcgcctcccacc-tgtccctcccaccacacgt-ggggattatgggaactaaaattcaagatgagatttggggggggacatgtccaaaccatatcaTCTAGA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8630 397 +     39403 GTATTCATATTTTTATATTCTAGTCta-ttagtcc-attcttatgctgctat-gaaaacat-acccaagactgggtaatttataaaggaaag----tgacttaattgactcgtg-tggctggaaagg-cctcaggaaactt--acagtcatgactgaaggggaagcaaacccagccttcttcacaaaggggtaggaaagagaag-tgctgagcaca-gaatggaaag--c-cctttat-aaa--gccatcagctctcatgagaatgtg-ctcgctcatcaggagaacagcag-catgag-ggtcactccccc---------------gtgattcaatcgcctcccacc-tgtccctcccaccacacgt-ggggattatgggaactaaaattcaagatgagatttggggggggacatgtccaaaccatatcaTCTAGA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          22411 397 -     87928 GTATTCATATTTTTATATTCTAGTCta-ttagtcc-attcttatgctgctat-gaaaacat-acccaagactgggtaatttataaaggaaag----tgacttaattgactcgtg-tggctggaaagg-cctcaggaaactt--acagtcatgactgaaggggaagcaaacccagccttcttcacaaaggggtaggagagagaag-tgctgagcaca-gaatggaaag--c-cctttat-aaa--gccatcagctctcatgagaatgtg-ctcgctcatcaggagaacagcag-catgag-ggtcactccccc---------------gtgattcaatcgcctcccacc-tgtccctcccaccacacgt-ggggattatgggaactaaaattcaagatgagatttggggggggacatgtccaaaccatatcaTCTAGA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         29370 397 +     60166 GTATTCATATTTTTATATTCTAGTCta-ttagtcc-attcttatgctgctat-gaaaacat-acccaagactgggtaatttataaaggaaag----tgacttaattgactcgtg-tggctggaaagg-cctcaggaaactt--acagtcatgactgaaggggaagcaaacccatccttcttcacaaaggggtaggagagagaag-tgctgagcaca-gaatggaaag--c-cctttat-aaa--gccatcagctctcatgagaatgtg-ctcgctcatcaggagaacagcag-catgag-ggtcactccccc---------------gtgattcaatcgcctcccacc-tgtccctcccaccacacgt-ggggattatgggaactaaaattcaagatgagatttagggggagacatgtccaaaccatatcaTCTAGA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      29567 397 +     67232 GTATTCATATTTTTATATTCTAGTCta-ttagtcc-attcttatgctgctat-gaaaacat-acccaagactgggtaatttataaaggaaag----tgacttaattgactcgtg-tggctggaaagg-cctcaggaaactt--acagtcatgactgaaggggaagcaaacccatccttcttcacaaaggggtaggagagagaag-tgctgagcaca-gaatggaaag--c-cctttat-aaa--gccatcagctctcatgagaatgtg-ctcgctcatcaggagaacagcag-catgag-ggtcactccccc---------------gtgattcaatcgcctcccacc-tgtccctcccaccacacgt-ggggattatgggaactaaaattcaagatgagatttagggggagacatgtccaaaccatatcaTCTAGA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          25040 397 +     90634 GTATTCATATTTTTATATTCTAGTCta-ttagtcc-attcttatgctgctat-gaaaacat-acccaagactgggtaatttataaaggaaag----tgacttaattgactcgtg-tggctggaaagg-cctcaggaaactt--acagtcatgactgaaggggaagcaaacccatccttcttcacaaaggggtaggagagagaag-tgctgagcaca-gaatggaaag--c-cctttat-aaa--gccatcagctctcatgagaatgtg-ctcgctcatcaggagaacagcag-catgag-ggtcactccccc---------------gtgattcaatcgcctcccacc-tgtccctcccaccacacgt-ggggattatgggaactaaaattcaagatgagatttagggggagacatgtccaaaccatatcaTCTAGA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          22412 397 -     89403 GTATTCATATTTTTATATTCTAGTCta-ttagtcc-attcttatgctgctat-gaaaacat-acccaagactgggtaatttataaaggaaag----tgacttaattgactcgtg-tggctggaaagg-cctcaggaaactt--acagtcatgactgaaggggaagcaaacccatccttcttcacaaaggggtaggagagagaag-tgctgagcaca-gaatggaaag--c-cctttat-aaa--gccatcagctctcatgagaatgtg-ctcgctcatcaggagaacagcag-catgag-ggtcactccccc---------------gtgattcaatcgcctcccacc-tgtccctcccaccacacgt-ggggattatgggaactaaaattcaagatgagatttagggggagacatgtccaaaccatatcaTCTAGA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.NDHI03003595.1                                 4765 398 -     34550 ttattcatatttttatattctagtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaagactgggtaatttataagggaaag----tggtttaattgactcaca-tggctgggaagg-cctcaggaaactt--acaatcatggctgaaggggaagcaagcacatccttcttcacaaagGGGTAGGAGAGAGAAG-TGCCTAGCAAA-GAGGGGAAAG--CAAccttat-aca--accatcagatctcaggagaattTACCTCACA-ATcttgagaacagcag-catgag-ggtaact-gcccc--------------atgattcaattacctcccaccaggtccct-ccaccACACATGGGGAATTat-ggaactaaaattcaagattagatttgggtggggacagagccaaaccatatcatctaga
i Pongo_abelii.NDHI03003595.1                            I 60 I 68
s Pongo_pygmaeus.ctg66                                     9573548 397 +   9816681 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaagactgggtaatttataagggaaag----tggtttaattgactcaca-tggctgggaagg-cctcaggaaactt--acaatcatggctgaaggggaagcaagcacatccttcttcacaaaggggtaggagagagaag-tgcctagcaaa-gaggggaaag--c-accttat-aca--accatcagatctcaggagaattta-ctcaca-atcttgagaacagcag-catgag-ggtaact-gcccc--------------atgattcaattacctcccaccaggtccctcccaccacacat-gggaattatgggaactaaaattcaagattagatttgggtggggacagagccaaactatatcaTCTAGA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76156 378 -     81375 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggtttcattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagtatgtccttcttcacaaaggggtaggagagagaag-tgctgagcaaa-gaggggaaag--t-cccttaa-aaa--accatcagatctcataagaattta-ctcact-atcacaagaacagcag-catgag-ggtaact-gcccc--------------atgattcaattacctcccactgggtccctgccaccacacat-ggggattatgt-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              7973 378 +     19060 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggtttcattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagtatgtccttcttcacaaaggggtaggagagagaag-tgctgagcaaa-gaggggaaag--t-cccttaa-aaa--accatcagatctcataagaattta-ctcact-atcacaagaacagcag-catgag-ggtaact-gcccc--------------atgattcaattacctcccactgggtccctgccaccacacat-ggggattatgt-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            12192   9 -     21651 ACATTT--------------AGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Psammomys_obesus.NESX01036370.1                        C 0 I 1
s Pygathrix_cinerea.k141_1153803                             17957 379 -     91421 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggtttcattgactcaca-tgcctgggaagggcctcaggaaactt--acactgatgactgaaggggaagcaagtatgtccttcttcacaaaggggtaggagagagaag-tgctgagcaaa-gaggggaaag--t-cccttaa-aaa--accatcagatctcgtgagaattta-ctcact-atcacaagaacagcag-catgag-ggtaact-gcccc--------------atgattcaattaccccccactgggtccctgccaccacacac-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612081 378 +   7812017 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggtttcattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagtatgtccttcttcacaaaggggtaggagagagaag-tgctgagcaaa-gaggggaaag--t-cccttaa-aaa--accatcagatctcgtgagaattta-ctcact-atcacaagaacagcag-catgag-ggtaact-gcccc--------------atgattcaattaccccccactgggtccctgccaccacacac-agggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             17988 378 -     72585 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggtttcattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagtatgtccttcttcacaaaggggtaggagagagaag-tgctgagcaaa-gaggggaaag--t-cccttaa-aaa--accatcagatctcgtgagaattta-ctcact-atcacaagaacagcag-catgag-ggtaact-gcccc--------------atgattcaattgccccccactgggtccctgccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaagccatatcaTCTAGA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                             9660 374 -     11128 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaag----tggtttcattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagtatgtccttcttcacaaaggggtaggagagagaag-tgctgagcaaa-gaggggaaag--t-cccttaa-aaa--accatcagatctcgtgagaattt-----act-atcacaagaacaacag-catgag-ggtaact-gcccc--------------atgattcaattacctcccactgggtccctgccaccacacat-ggggattatgg-------------------gatttgggtggggacagggccaaaccatatcaTCTAGA
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239024 378 - 195417433 ttattcatatttttatattctagtgta-ttagtcc-attctcatgctgcttt-gAAAACAT-ACTCAATACTgtgtaatttataagggaaag----tggtttcattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagtatgtccttcttcacaaaggggtaggagagagaag-tgctgagcaaa-gaggGGAAAG--T-cccttaa-aaa--accatcagatctcgtgagaattta-ctcact-atcacaagaacaacag-catgag-ggtaact-gcccc--------------atgattcaattacctcccactgggtccctgccaccacacat-ggggattatgg-------------------gatttgggtggggacagggccaaaccatatcatctagA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7674671 378 +   7961872 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataagggaaaa----tggtttcattgactcaca-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagtatgtccttcttcacaaaggggtaggagagagaag-tgctgagcaaa-gaggggaaag--t-cccttaa-aaa--accatcagatctcatgagaattta-ctcact-atcacaagaacaacag-catgag-ggtaact-gcccc--------------atgattcaattacctcccactgggtccctgccaccacacat-ggggattatgg-------------------gatttgggtggggacagggccaaaccatatcaTCTAGA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Semnopithecus_entellus.k141_1672505                         2830 378 -     12572 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataaggggaag----tggtttcattgactcaca-tgcctgagaagg-cctcaggaaactt--acactgatgactgaaggggaagcaaatatgtccttcttcacaaaggggtaggagagagaag-tgctgagcaaa-gaggggaaag--t-cccttaa-aaa--accatcagacctcgtgagaattta-ctcact-atcacaagaacagcag-catgag-ggtaact-gcccc--------------atgatttaattacctcccactgggtccctgccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      29682 378 +     39453 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataaggggaag----tggtttcattgactcaca-tgcctgagaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagtatgtccttcttcacaaaggggtaggagagagaag-tgctgagcaaa-gaggggaaag--t-cccttaa-aaa--accatcagacctcgtgagaattta-ctcact-atcacaagaacagcag-catgag-ggtaact-gcccc--------------atgatttaattacctcccactgggtccctgccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           10190 378 +     27826 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataaggggaag----tggtttcattgactcaca-tgcctgagaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagtatgtccttcttcacaaaggggtaggagagagaag-tgctgagcaaa-gaggggaaag--t-cccttaa-aaa--accatcagacctcgtgagaattta-ctcact-atcacaagaacagcag-catgag-ggtaact-gcccc--------------atgatttaattacctcccactgggtccctgccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                             9726 378 -     19483 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataaggggaag----tggtttcattgactcaca-tgcctgagaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagtatgtccttcttcacaaaggggtaggagagagaag-tgctgagcaaa-gaggggaaag--t-cccttaa-aaa--accatcagacctcgtgagaattta-ctcact-atcacaagaacagcag-catgag-ggtaact-gcccc--------------atgatttaattacctcccactgggtccctgccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3029 378 -     12762 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataaggggaag----tggtttcattgactcaca-tgcctgagaagg-cctcaggaaactt--acactgatgactgaaggggaagcaaatatgtccttcttcacaaaggggtaggagagagaag-tgctgagcaaa-gaggggaaag--t-cccttaa-aaa--accatcagacctcgtgagaattta-ctcact-atcacaagaacagcag-catgag-ggtaact-gcccc--------------atgatttaattacctcccactgggtccctgccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           2877 378 +     13763 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataaggggaag----tggtttcattgactcaca-tgcctgagaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagtatgtccttcttcacaaaggggtaggagagagaag-tgctgagcaaa-gaggggaaag--t-cccttaa-aaa--accatcagacctcgtgagaattta-ctcact-atcacaagaacagcag-catgag-ggtaact-gcccc--------------atgatttaattacctcccactgggtccctgccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     2099   9 -     30804 ATAGTT--------------AAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Sigmodon_hispidus.SigHis_scaffold_42075                I 3 I 1
s Spermophilus_dauricus.KZ294078.1                         1955339   9 -   3870691 TTATCT--------------TAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 1
s Theropithecus_gelada.CM009954.1                        186431351 379 + 186847797 ttattcatatttttatattctagtgta-ttagtcc-attctcatgctgcttt-gAAAACAT-ACTCaatactgtgtaatttataagggaaag----tgGCTTCATTGAGTCACA-tgcctgggaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagcatgtccttcttcacaaaggggtaggagagagaag-tgccgagcaaa-gaggggaaag--t-cctttaa-aaaa-accgtcagatctcatgagaattta-ctcact-atcacgagaacagcag-caTGAG-GGTAaat-gcccc--------------atgattcaattacctcccactgggtccctcccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcatctaga
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106645   9 +    114563 TTGTTA--------------TGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 31 I 1
s Trachypithecus_auratus.k141_722599                         13775 378 -     20410 TTATTCATATTTTTATATTCTAGtgta-tttgtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataaggggaag----tggtttcattgactcaca-tgcctgagaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagtatgtccttcttcacaaaggggtaggagagagaag-tgctgagcaaa-gaggggaaag--t-cccttaa-aaa--accatcagacctcgtgagaattta-ctcact-attacaagaacagcag-catgag-ggtaact-gcccc--------------atgatttaattacctcccactgggtccctgccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      2891 378 -     12674 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataaggggaag----tggtttcattgactcaca-tgcctgagaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagtatgtccttcttcacaaaggggtaggagagagaag-tgctgagcaaa-gaggggaaag--t-cccttaa-aaa--accatcagacctcgtgagaattta-ctcact-atcacaagaacagcag-catgag-ggcaact-gcccc--------------atgatttaattacctcccactgggtccctgccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       13883 378 +     19930 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataaggggaag----tggtttcattgactcaca-tgcctgagaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagtatgtccttcttcacaaaggggtaggagagagaag-tgctgagcaaa-gaggggaaag--t-cccttaa-aaa--accatcagacctcgtgagaattta-ctcact-attacaagaacagcag-catgag-ggtaact-gcccc--------------atgatttaattacctcccactgggtccctgccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      10278 378 -     19997 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataaggggaag----tggtttcattgactcaca-tgcctgagaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagtatgtccttcttcacaaaggggtaggagagagaag-tgctgagcaaa-gaggggaaag--t-cccttaa-aaa--accatcagacctcgtgagaattta-ctcact-atcacaagaacagcag-catgag-ggtaact-gcccc--------------atgatttaattacctcccactgggtccctgccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            50423 380 -     60166 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataaggggaag----tggtttcattgactcaca-tgcctgagaagg-cctcgggaaacttaaacactgatgactgaaggggaagcaagtatgtccttcttcacaaaggggtaggagagagaag-tgctgagcaaa-gaggggaaag--t-cccttaa-aaa--accatcagacctcgtgagaattta-ctcact-atcacaagaacagcag-catgag-ggtaact-gcccc--------------atgatttaattacctcccactgggtccctgccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        17886 378 -     27529 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataaggggaag----tggtttcattgactcaca-tgcctgagaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagtatgtccttcttcacaaaggggtaggagagagaag-tgctgagcaaa-gaggggaaag--t-cccttaa-aaa--accatcagacctcgtgagaattta-ctcact-atcacaagaacagcag-catgag-ggtaact-gcccc--------------atgatttaattacctcccactgggtccctgccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_143409                     17836 357 -     18194 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataaggggaag----tggtttcattgactcaca-tgcctgagaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagtatgtccttcttcacaaaggggtaggagagagaag-tgctgagcaaa-gaggggaaag--t-cccttaa-aaa--accatcagacctcgtgagaattta-ctcact-atcacaagaacagcag-catgag-ggtaact-gcccc--------------atgatttaattacctcccactgggtccctgccaccacacat-ggggattatgg-------------------gatttgggtggggacag---------------------
i Trachypithecus_hatinhensis.k141_143409                 C 0 N 0
s Trachypithecus_laotum.k141_907409                          11546 361 -     21137 ATATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataaggggaag----tggtttcattgactcaca-tgcctgagaagg-cctcaggaaactt--atactgatgactgaaggggaagcaagtatgtccttcttcacaaaggggtaggagagagaag-tgctgagcaaa-gaggggaaag--t-cccttaa-aaa--accatcagacctcgtgagaattta-ctcact-atcacaagaacagcag-catgag-ggtaact-gcccc--------------atgatttaattacctcccactgggtccctgccaccacacat-ggggattatgg-------------------gatttgggtggggacaga-----------------aga
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                   10248 378 -     10723 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataaggggaag----tggtttcattgactcaca-tgcctgagaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagtatgtccttcttcacaaaggggtaggagagagaag-tgctgagcaaa-gaggggaaag--t-cccttaa-aaa--accatcagacctcgtgagaattta-ctcact-atcacaagaacagcag-catgag-ggtaact-gcccc--------------atgatttaattacctcccactgggtccctgccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         9425 378 +      9834 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataaggggaag----tggtttcagtgactcaca-tgcctgagaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagtatgtccttcttcacaaaggggtaggagagagaag-tgctgagcaaa-gaggggaaag--t-cccttaa-aaa--accatcagacctcgtgagaattta-ctcact-atcacaagaacagcag-catgag-ggtaact-gcccc--------------atgatttaattacctcccactgggtccctgccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        27748 378 +     32220 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataaggggaag----tggtttcattgactcaca-tgcctgagaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagtatgtccttcttcacaaaggggtaggagagagaag-tgctgagcaaa-gaggggaaag--t-cccttaa-aaa--accatcagacctcgtgagaattta-ctcact-atcacaagaacagcag-catgag-ggtaact-gcccc--------------atgatttaattacctcccactgagtccctgccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5941845 378 +   6242583 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataaggggaag----tggtttcattgactcaca-tgcctgagaagg-cctcaggaaactt--acactgatgactgaaggggaagcaagtatgtccttcttcacaaaggggtaggagagagaag-tgctgagcaaa-gaggggaaag--t-cccttaa-aaa--accatcagacctcgtgagaattta-ctcact-atcacaagaacagcag-catgag-ggtaact-gcccc--------------atgatttaattacctcccactgggtccctgccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11096 380 +     20839 TTATTCATATTTTTATATTCTAGtgta-ttagtcc-attctcatgctgcttt-gaaaacat-actcaatactgtgtaatttataaggggaag----tggtttcattgactcaca-tgcctgagaagg-cctcgggaaacttaaacactgatgactgaaggggaagcaagtatgtccttcttcacaaaggggtaggagagagaag-tgctgagcaaa-gaggggaaag--t-cccttaa-aaa--accatcagacctcgtgagaattta-ctcact-atcacaagaacagcag-catgag-ggtaact-gcccc--------------atgatttaattacctcccactgggtccctgccaccacacat-ggggattatgg-------------------gatttgggtggggacagagccaaaccatatcaTCTAGA
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          2342   9 +    224448 TTACTT--------------TAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 1
s Zapus_hudsonius.ZapHud_scaffold_11398                      16100   9 +     63895 AGATTT--------------GAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 1
e Echinops_telfairi.JH980293.1                            48781881  13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441   0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202   0 +      8798 C
e Galago_senegalensis.k141_631886                             7400   0 +     11339 C
e Galago_moholi.ctg2040                                     429710   0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280  56 -     80660 I
e Sapajus_apella.ctg103                                    5422039  56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698  57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554  57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481  57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802  57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707  57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365  57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731  56 -      7576 I
e Saguinus_midas.LG03                                    209476296  66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403  57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771  57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323  57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639  66 +     42994 I
e Mico_schneideri.k141_916733                                        599  57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012  57 +      1399 I
e Mico_argentatus.k141_1024458                                 599  57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687  57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983  57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367  57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680  57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338  57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964   2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748  56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019  56 +     28840 I
e Cebus_albifrons.Contig27                                25654081  56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600  57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658   0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574  57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760  57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899  57 +      5377 I
e Callimico_goeldii.k141_737284                                604  57 -     31217 I
e Callibella_humilis.k141_10318                                963  57 +     27907 I
e Aotus_vociferans.k141_344750                               30359  57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235  57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626  57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199  57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201  57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476  16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445   0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734   0 -     33856 C
e Perodicticus_potto.k141_1186926                              597   0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219   0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 12422 320 -     43706 T
e Vicugna_pacos.KN270157.1                                 5373028   0 -   5488506 C
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851655   0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   54538   0 -     77625 C
e Tursiops_truncatus.MRVK01000835.1                       15739155   0 +  33153633 C
e Tupaia_chinensis.KB320699.1                              2157208   1 +   4065304 I
e Trichechus_manatus.JH594705.1                            4294941  30 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_40725                     822 276 +     27266 I
e Tonatia_saurophila.TonSau_scaffold_294                     82454   0 +    610378 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   7643   0 +      8208 C
e Tarsius_wallacei.k141_254427                                1877   3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080   3 +     70052 I
e Tapirus_terrestris.TapTer_scaffold_755                    388291  19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821  19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73921   0 +    116680 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                12067   0 +     41958 C
e Symphalangus_syndactylus.tarseq_199                      1093192   0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6812377   0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629              19564   0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             32272   0 +     97271 C
e Sorex_araneus.JH798187.1                                13652242   0 -  18376816 C
e Solenodon_paradoxus.SolPar_flattened_line_126               4974  81 +   1910179 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    154437   0 -    313613 C
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                89085   0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        368241   0 -   3329780 C
e Rattus_norvegicus.chr16                                 53571770 803 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  6511   1 +     55207 I
e Puma_concolor.QAVW01001104.1                            20275553   0 -  38429054 C
e Pteropus_vampyrus.KN534172.1                                8028  12 -      8028 I
e Pteropus_alecto.KB030862.1                              22978014   7 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         41795   0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            16396   0 -     21811 C
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790  14 -     22811 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             2992  11 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               9958   0 +     63832 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690  60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13888   0 -     78924 C
e Pantholops_hodgsonii.KE114653.1                          1265930   1 -   2937107 I
e Panthera_tigris.KE722367.1                               4722483   0 -   8748460 C
e Panthera_pardus.KV860321.1                                265603   0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  152394   0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      175026   1 -    191736 I
e Ovis_aries.CM001607.2                                   17587041   1 +  44047080 I
e Otocyon_megalotis.JAEUCK010005147.1                       463984 325 -    559221 T
e Orycteropus_afer.OryAfe_flattened_line_144387              12271  14 -     18566 I
e Orcinus_orca.KB316932.1                                  2782913   0 -  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          77765   1 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         145831   4 +    630418 I
e Odobenus_rosmarus.KB229312.1                              507937   0 -   2017862 C
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869   0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414   0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947   0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9150892 182 -   9404916 T
e Noctilio_leporinus.NocLep_scaffold_251                    759113   0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5867004   0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20308795   0 +  31847680 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190536   0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_281845                        1211  12 +      1835 I
e Myotis_lucifugus.GL429869.1                              3905059  12 -   4330536 I
e Myotis_davidii.KB100139.1                                1588961  10 -   6019432 I
e Myotis_brandtii.KE162005.1                                279962 1755 -  10118263 I
e Mustela_putorius.JH418006.1                               302988   0 -  14710649 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           8065  12 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398   7 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   1933   1 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 142908   0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    28035   0 -    437263 C
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7202   0 -      8324 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             35221   4 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1851541   4 +   8254450 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                17111  17 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593  14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    4526   0 +     10310 C
e Mellivora_capensis.MelCap_flattened_line_69365             11593   0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                        14587   0 -    207569 C
e Manis_pentadactyla.KN006162.1                              51509   0 -    317179 C
e Manis_javanica.JSZB01003497.1                              19491   0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 91899   0 +     94391 C
e Lycaon_pictus.CM007581.1                                17956957 950 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653  30 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             268920   0 -    662738 C
e Leptonychotes_weddellii.KB714746.1                       3044334   0 +   3914936 C
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Lasiurus_borealis.LasBor_scaffold_50988                    16384  22 +     29960 I
e Kogia_breviceps.KogBre_flattened_line_192630                3231   0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23856   0 +     23964 C
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052   0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157   0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374   0 +     14092 C
e Hylobates_agilis.k141_232023                                2330   0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  46270   0 +     55795 C
e Hipposideros_galeritus.HipGal_scaffold_101188                337   0 +      9903 C
e Hipposideros_armiger.JXIK01000431.1                       111767   0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577   3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337  14 +      7595 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 19068   1 +     36099 I
e Helogale_parvula.HelPar_flattened_line_2585               243564   0 +    327341 C
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     609854   1 -    660261 I
e Galagoides_demidoff.k141_1711393                            4689   0 +     41679 C
e Felis_nigripes.FelNig_flattened_line_20823                 10786   0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20197032   0 + 205367284 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Eubalaena_japonica.EubJap_flattened_line_31514             26270   0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           12317   0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467  19 +    498745 I
e Equus_caballus.CM000403.2                               18532438  19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631  19 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2146969  11 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16330881   0 -  41312741 C
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       311891   1 +    607251 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115  19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363  19 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8631364   0 +  20541912 C
e Delphinapterus_leucas.KZ290073.1                        16812652   0 +  35494412 C
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64769   0 +   2246927 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             29730   0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_37019               4143   0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11668671   0 + 224834208 C
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           1737   0 +     23735 C
e Condylura_cristata.JH655891.1                           17549290   0 -  53390261 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1750   0 -      8501 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542  19 -     25243 I
e Cephalopachus_bancanus.k141_1423433                         6085   3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     94807   0 +    217609 C
e Carollia_perspicillata.CarPer_scaffold_92756                6354   0 -     11696 C
e Carlito_syrichta.NW_007259797.1                           156587   3 -    496798 I
e Capra_hircus.CM004588.1                                 18061575   1 -  44709034 I
e Capra_aegagrus.CM003241.1                               18830855   1 +  46296322 I
e Canis_lupus_orion.HG994398.1                            18502019 950 +  63665305 I
e Canis_lupus_familiaris.chr16                            17960717 950 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9036246 952 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     1546 950 -     43241 I
e CanFam4.chr16                                           17800803 952 -  60362399 I
e Camelus_ferus.KB017975.1                                  404284   0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2335985   0 -   7040546 C
e Camelus_bactrianus.KN276810.1                           10003509   0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2820237   1 +   4408762 I
e Bos_taurus.CM000203.6                                   18084561   1 +  45695690 I
e Bos_mutus.JH880303.1                                     1126483   1 -   1948126 I
e Bos_indicus.CM003047.1                                  20273923   1 +  48749331 I
e Bison_bison.KN261452.1                                    200738   1 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    27647   1 +     34529 I
e Balaenoptera_bonaerensis.DF707048.1                         3470   0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15193005   0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6014   0 +     43469 C
e Arctocebus_calabarensis.k141_1648548                         538   0 +      5281 C
e Antilocapra_americana.AntAmePen_scaffold_12469             99220   1 -    100397 I
e Anoura_caudifer.AnoCau_scaffold_1412                      186612   0 +    412891 C
e Ammotragus_lervia.NIVO01071767.1                          676741   1 -   2318259 I
e Ailurus_fulgens.LNAC01001112.1                             80933   0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9511853   0 -  29979442 C
e Acinonyx_jubatus.LLWD01001279.1                           828546   0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       9977 2 +     62944 ta
s Acinonyx_jubatus.LLWD01001279.1                           828546 1 -   1699592 -t
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 31
s Acomys_cahirinus.AcoCah_scaffold_12655                     72546 2 +     87051 TT
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 1 I 7
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511853 1 -  29979442 -g
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 24
s Ailurus_fulgens.LNAC01001112.1                             80933 1 -    347723 -g
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 24
s Allactaga_bullata.AllBul_scaffold_9566                     75667 2 -     89534 TT
i Allactaga_bullata.AllBul_scaffold_9566                 I 1 C 0
s Allenopithecus_nigroviridis.k141_3361533                   17848 2 -     52922 TA
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         17779 2 -     28001 TA
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8274 2 -     18505 TA
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9127 2 -     12518 TA
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              9593 2 +     51355 CA
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                2698 2 -     36483 CA
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13155 2 +     28687 CA
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 1623 2 +     27940 CA
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            2705 2 -      9457 CA
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             1663 2 +     30492 CA
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              5658 2 +     47717 CA
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              2390 2 +      5663 CA
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             16842 2 +     50774 CA
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          676742 1 -   2318259 -t
i Ammotragus_lervia.NIVO01071767.1                       I 1 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      186612 1 +    412891 -G
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             99221 1 -    100397 -t
i Antilocapra_americana.AntAmePen_scaffold_12469         I 1 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13890 2 +     20879 TT
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 1 I 2
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6014 1 +     43469 -T
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21209857 2 -  21539123 AA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               44653 2 -     48001 AA
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 27457 2 -     30947 AA
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9229 2 -     89868 AA
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              13613 2 -     40414 AA
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                21502 2 +     72325 AA
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193005 1 +  23207421 -t
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         3470 1 -     18090 -t
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    27648 1 +     34529 -t
i Beatragus_hunteri.BeaHun_scaffold_50177                I 1 C 0
s Bison_bison.KN261452.1                                    200739 1 -    288883 -t
i Bison_bison.KN261452.1                                 I 1 C 0
s Bos_indicus.CM003047.1                                  20273924 1 +  48749331 -t
i Bos_indicus.CM003047.1                                 I 1 C 0
s Bos_mutus.JH880303.1                                     1126484 1 -   1948126 -t
i Bos_mutus.JH880303.1                                   I 1 C 0
s Bos_taurus.CM000203.6                                   18084562 1 +  45695690 -t
i Bos_taurus.CM000203.6                                  I 1 C 0
s Bubalus_bubalis.KI419123.1                               2820238 1 +   4408762 -t
i Bubalus_bubalis.KI419123.1                             I 1 C 0
s Cacajao_ayresi.k141_552049                                102474 2 -    122966 AA
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   61979 2 +     81800 AA
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31159 2 -     95584 AA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55260 2 -    119600 AA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10003509 1 -  17673402 -t
i Camelus_bactrianus.KN276810.1                          C 0 I 25
s Camelus_dromedarius.KN272107.1                           2335985 1 -   7040546 -t
i Camelus_dromedarius.KN272107.1                         C 0 I 25
s Camelus_ferus.KB017975.1                                  404284 1 -   1652518 -t
i Camelus_ferus.KB017975.1                               C 0 I 25
s Capra_aegagrus.CM003241.1                               18830856 1 +  46296322 -t
i Capra_aegagrus.CM003241.1                              I 1 C 0
s Capra_hircus.CM004588.1                                 18061576 1 -  44709034 -t
i Capra_hircus.CM004588.1                                I 1 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    2200 2 -     12242 TA
i Capromys_pilorides.CapPil_scaffold_65020               I 1 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6354 1 -     11696 -T
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138549 2 +    179628 TA
i Castor_canadensis.CasCan_scaffold_2074                 I 1 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     94807 1 +    217609 -T
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 25
s Cercocebus_atys.KQ010504.1                               4478809 2 +   4669795 ta
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3303 2 +     17872 TA
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           3898 2 -     14043 TA
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          11993 2 +     27781 TA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12139 2 -     20310 TA
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15119 2 +     29689 TA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            9875 2 -     20078 TA
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          17790 2 -     27936 TA
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            6659 2 -     17152 TA
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826389 2 +  39242232 TA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21225893 2 -  21565898 TA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43012 2 -     53127 TA
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3262 2 +     13442 TA
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       17808 2 -     27947 TA
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                          837 2 +     10558 TA
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          3842 2 +     14005 TA
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1082 2 -     17098 AA
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                               958 2 +     17877 AA
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            158525 2 -    216457 AA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63000 2 +     76511 AA
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254119 2 +   2543920 ta
i Chinchilla_lanigera.JH722012.1                         I 1 C 0
s Chiropotes_israelita.k141_747660                           99603 2 +    146308 AA
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          31411 2 -     50570 AA
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18431712 2 -  18827391 TA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18218 2 -     50209 TA
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425217 2 + 135778131 ta
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1913718 2 +   2368649 TA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199951967 2 + 200372422 TA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40243 2 +     84244 TA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549290 1 -  53390261 -T
i Condylura_cristata.JH655891.1                          C 0 I 4
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1737 1 +     23735 -T
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 51811 2 +     63868 TT
i Cricetomys_gambianus.CriGam_scaffold_18520             I 1 I 7
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29730 1 -     87169 -T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 28
s Ctenodactylus_gundi.CteGun_scaffold_65                    838313 2 +   1526836 TA
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 8 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37072 2 +     51376 TA
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 1 C 0
s Delphinapterus_leucas.KZ290073.1                        16812652 1 +  35494412 -t
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8631364 1 +  20541912 -t
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37614 2 +     67921 TA
i Dinomys_branickii.DinBra_scaffold_21862                I 1 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       311892 1 +    607251 -t
i Elaphurus_davidianus.JRFZ01104969.1                    I 1 C 0
s Ellobius_lutescens.LOEQ01008920.1                          22327 2 -    110024 gt
i Ellobius_lutescens.LOEQ01008920.1                      I 1 I 7
s Ellobius_talpinus.LOJH01081419.1                            2233 2 +      8657 GT
i Ellobius_talpinus.LOJH01081419.1                       I 1 I 7
s Enhydra_lutris.KZ291758.1                               16330881 1 -  41312741 -G
i Enhydra_lutris.KZ291758.1                              C 0 I 25
s Erythrocebus_patas.Contig38                             21208385 2 -  21539334 TA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12317 1 +    133382 -A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             26270 1 -     44125 -T
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20238189 1 + 206538554 -t
i Felis_catus.CM001381.2                                 C 0 I 31
s Felis_catus_fca126.CM031415.1                           20197032 1 + 205367284 -t
i Felis_catus_fca126.CM031415.1                          C 0 I 31
s Felis_nigripes.FelNig_flattened_line_20823                 10786 1 -     36744 -T
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 31
s Fukomys_damarensis.KN121974.1                             851635 2 +   3816255 TA
i Fukomys_damarensis.KN121974.1                          I 1 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               2732 2 -      9135 TA
i Galeopterus_variegatus.GalVar_scaffold_108840          I 1 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     609855 1 -    660261 -a
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 1 C 0
s Gorilla_beringei.k141_3596273                              19219 2 -     32273 TA
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341355 2 + 186649187 ta
i Gorilla_gorilla.LT578341.1                             I 400 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33859 2 +     78134 TT
i Graphiurus_murinus.GraMur_scaffold_10447               I 1 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243564 1 +    327341 -T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 31
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 19069 1 +     36099 -t
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 1 C 0
s Heterocephalus_glaber.JH602082.1                        20663419 2 +  22651954 TA
i Heterocephalus_glaber.JH602082.1                       I 1 C 0
s Hipposideros_armiger.JXIK01000431.1                       111767 1 +   1711038 -t
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188                337 1 +      9903 -T
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 C 0
s Hoolock_leuconedys.ctg274                                    438019 2 +    630532 TA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46270 1 +     55795 -G
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 29
s Hystrix_cristata.HysCri_scaffold_5660                      84308 2 +    135385 TA
i Hystrix_cristata.HysCri_scaffold_5660                  I 1 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7522203 2 -   7955117 TT
i Ictidomys_tridecemlineatus.JH393364.1                  I 1 I 2
s Inia_geoffrensis.IniGeo_flattened_line_48101               23856 1 +     23964 -T
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8278369 1 -   9596543 T-
i Jaculus_jaculus.JH725527.1                             I 1 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                3231 1 -      3359 -T
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         15663 2 -     38430 AA
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3044334 1 +   3914936 -g
i Leptonychotes_weddellii.KB714746.1                     C 0 I 25
s Lepus_americanus.LepAme_scaffold_107385                     7990 2 -     14121 TT
i Lepus_americanus.LepAme_scaffold_107385                I 1 C 0
s Lipotes_vexillifer.KE559953.1                             268920 1 -    662738 -t
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1440351 2 +   1826925 TA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                              10161 2 +     40492 TA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679415 2 +  60120075 TA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 15932 2 -     26193 TA
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            83708 2 -    114318 TA
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9399 2 -     23192 TA
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                18863 2 -     29190 TA
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27441 2 +     37952 TA
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842520 2 + 187317192 ta
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461096 2 -  25927173 ta
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83297 2 +     89720 TA
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10290 2 +     20474 TA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10087 2 -     14993 TA
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  332949 2 -    668171 TA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8399 2 -     24072 ta
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29030 2 -     45290 TA
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91899 1 +     94391 -T
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23940618 2 -  24302211 TA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354734 2 +    752769 TA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              19491 1 +    737560 -T
i Manis_javanica.JSZB01003497.1                          C 0 I 27
s Manis_pentadactyla.KN006162.1                              51509 1 -    317179 -t
i Manis_pentadactyla.KN006162.1                          C 0 I 27
s Marmota_marmota.CZRN01000018.1                          33104490 2 -  40650429 TT
i Marmota_marmota.CZRN01000018.1                         I 1 I 2
s Megaderma_lyra.MegLyr_scaffold_4542                        14587 1 -    207569 -T
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             11593 1 +     13704 -G
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 25
s Meriones_unguiculatus.MerUng_scaffold_7390                 34561 2 +    140813 TT
i Meriones_unguiculatus.MerUng_scaffold_7390             I 1 I 7
s Mesocricetus_auratus.KB708134.1                         12184032 2 -  29670104 TT
i Mesocricetus_auratus.KB708134.1                        I 1 I 7
s Mesoplodon_bidens.MesBid_scaffold_108144                    4526 1 +     10310 -T
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11262309 2 -  27267610 gt
i Microtus_ochrogaster.CM001695.1                        I 1 I 7
s Miopithecus_ogouensis.k141_534055                          12294 2 -     28506 TA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         7202 1 -      8324 -g
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 25
s Monodon_monoceros.MonMon_M_scaffold_103                    28035 1 -    437263 -T
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142908 1 -    366855 -T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   1934 1 +     82753 -t
i Moschus_moschiferus.MosMos_scaffold_13123              I 1 C 0
s Mus_caroli.LT608237.1                                   84362942 2 - 120012414 tt
i Mus_caroli.LT608237.1                                  I 1 I 7
s Mus_musculus.chr8                                       87652441 2 - 129401213 TT
i Mus_musculus.chr8                                      I 1 I 7
s Mus_pahari.LT608297.1                                   31357175 2 -  89631738 tt
i Mus_pahari.LT608297.1                                  I 1 I 7
s Mus_spretus.CM004101.1                                  90754932 2 - 130317789 tt
i Mus_spretus.CM004101.1                                 I 1 I 7
s Mustela_putorius.JH418006.1                               302988 1 -  14710649 -G
i Mustela_putorius.JH418006.1                            C 0 I 25
s Myocastor_coypus.MyoCoy_scaffold_10123                     72382 2 -     80779 TA
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 1 C 0
s Nannospalax_galili.KL204047.1                            2036745 2 -   3037898 TT
i Nannospalax_galili.KL204047.1                          I 1 I 7
s Nasalis_larvatus.k141_413338                               18350 2 +     21681 TA
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308795 1 +  31847680 -g
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 25
s Neophocaena_asiaeorientalis.KZ687982.1                   5867004 1 +   7148211 -t
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    759113 1 +    783361 -T
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Ochotona_princeps.JH802162.1                             1365433 2 +   3988456 tt
i Ochotona_princeps.JH802162.1                           I 1 C 0
s Odobenus_rosmarus.KB229312.1                              507937 1 -   2017862 -g
i Odobenus_rosmarus.KB229312.1                           C 0 I 25
s Okapia_johnstoni.LVCL01S0005463.1                          77766 1 -    150152 -a
i Okapia_johnstoni.LVCL01S0005463.1                      I 1 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   26948 2 +     28053 TT
i Ondatra_zibethicus.OndZib_scaffold_46174               I 1 I 7
s Onychomys_torridus.OnyTor_scaffold_2986                    81961 2 +    102263 CT
i Onychomys_torridus.OnyTor_scaffold_2986                I 1 I 7
s Orcinus_orca.KB316932.1                                  2782913 1 -  10937097 -t
i Orcinus_orca.KB316932.1                                C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67148891 2 + 174332312 tt
i Oryctolagus_cuniculus.CM000791.1                       I 1 C 0
s Ovis_aries.CM001607.2                                   17587042 1 +  44047080 -t
i Ovis_aries.CM001607.2                                  I 1 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      175027 1 -    191736 -t
i Ovis_canadensis.OviCan_scaffold_2572                   I 1 C 0
s Pan_paniscus.KQ411613.1                                    47320 2 +     80009 ta
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146190 2 + 189151597 ta
i Pan_troglodytes.CM009242.2                             I 395 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152394 1 +    230217 -T
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 31
s Panthera_pardus.KV860321.1                                265603 1 +  18783137 -t
i Panthera_pardus.KV860321.1                             C 0 I 31
s Panthera_tigris.KE722367.1                               4722483 1 -   8748460 -t
i Panthera_tigris.KE722367.1                             C 0 I 31
s Pantholops_hodgsonii.KE114653.1                          1265931 1 -   2937107 -t
i Pantholops_hodgsonii.KE114653.1                        I 1 C 0
s Papio_anubis.CM001495.2                                183446424 2 + 183742232 ta
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10074 2 +     20448 TA
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20566882 2 +  20919399 TA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   8814 2 +     41871 TA
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12107 2 +     27711 TA
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3106 2 -     11374 TA
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13888 1 -     78924 -T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 28
s Peromyscus_maniculatus.KI615324.1                       18196589 2 -  18517816 CT
i Peromyscus_maniculatus.KI615324.1                      I 1 I 5
s Petromus_typicus.PetTyp_scaffold_42190                     29353 2 -     29689 TA
i Petromus_typicus.PetTyp_scaffold_42190                 I 1 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               9958 1 +     63832 -T
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            1422 2 +     68526 TA
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        41568 2 +     89929 TA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            42982 2 +     51399 TA
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299219 2 -  14605196 TA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1476471                              4865 2 +     26961 AA
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1010 2 +     23417 AA
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                4857 2 +     29694 AA
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          29883 2 +     52772 AA
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           4879 2 +     26198 AA
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3941427 2 +   4542175 AA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            4843 2 -     23490 AA
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9099 2 -     39866 AC
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18265 2 +     34906 AC
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       22529 2 +     87950 AC
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23356 2 +     88961 AC
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9027 2 +     39403 AC
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          22808 2 -     87928 AC
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         29767 2 +     60166 AC
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      29964 2 +     67232 AC
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          25437 2 +     90634 AC
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          22809 2 -     89403 AC
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189134336 2 + 189387572 ta
i Pongo_abelii.CM009266.2                                I 397 C 0
s Pongo_pygmaeus.ctg66                                     9573945 2 +   9816681 TA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76534 2 -     81375 TA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8351 2 +     19060 TA
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            12202 2 -     21651 TT
i Psammomys_obesus.NESX01036370.1                        I 1 I 7
s Pteronotus_parnellii.KE909381.1                            16396 1 -     21811 -t
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41795 1 +     42204 -G
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 25
s Puma_concolor.QAVW01001104.1                            20275553 1 -  38429054 -t
i Puma_concolor.QAVW01001104.1                           C 0 I 31
s Pygathrix_cinerea.k141_1153803                             18336 2 -     91421 TA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612459 2 +   7812017 TA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18366 2 -     72585 TA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6512 1 +     55207 -t
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 1 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        368241 1 -   3329780 -t
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                            10034 2 -     11128 TA
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239402 2 - 195417433 TA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675049 2 +   7961872 TA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89085 1 -     96226 -T
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154437 1 -    313613 -T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 4
s Semnopithecus_entellus.k141_1672505                         3208 2 -     12572 TA
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30060 2 +     39453 TA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           10568 2 +     27826 TA
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10104 2 -     19483 TA
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3407 2 -     12762 TA
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3255 2 +     13763 TA
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     2109 2 -     30804 AT
i Sigmodon_hispidus.SigHis_scaffold_42075                I 1 I 10
s Sorex_araneus.JH798187.1                                13652242 1 -  18376816 -a
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1955349 2 -   3870691 TT
i Spermophilus_dauricus.KZ294078.1                       I 1 I 2
s Spilogale_gracilis.SpiGra_flattened_line_13525             32272 1 +     97271 -G
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 24
s Suricata_suricatta.SurSur_flattened_line_6629              19564 1 -    196729 -T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 31
s Sus_scrofa.CM000828.4                                    6812377 1 +  69701581 -t
i Sus_scrofa.CM000828.4                                  C 0 I 25
s Tadarida_brasiliensis.TadBra_scaffold_25820                12067 1 +     41958 -T
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Theropithecus_gelada.CM009954.1                        186431730 2 + 186847797 ta
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106655 2 +    114563 TA
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 1 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     82454 1 +    610378 -T
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         14153 2 -     20410 TA
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3269 2 -     12674 TA
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14261 2 +     19930 TA
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      10656 2 -     19997 TA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            50803 2 -     60166 TA
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18264 2 -     27529 TA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                          4 2 +      9229 TA
i Trachypithecus_hatinhensis.k141_17719                  N 0 C 0
s Trachypithecus_laotum.k141_907409                          11907 2 -     21137 ta
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                   10626 2 -     10723 TA
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         9803 2 +      9834 TA
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28126 2 +     32220 TA
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942223 2 +   6242583 TA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11476 2 +     20839 TA
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15739155 1 +  33153633 -t
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54538 1 -     77625 -T
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 4
s Ursus_maritimus.KK499267.1                               4851655 1 -   5085361 -G
i Ursus_maritimus.KK499267.1                             C 0 I 25
s Vicugna_pacos.KN270157.1                                 5373028 1 -   5488506 -t
i Vicugna_pacos.KN270157.1                               C 0 I 25
s Xerus_inauris.XerIna_scaffold_2302                          2352 2 +    224448 AT
i Xerus_inauris.XerIna_scaffold_2302                     I 1 I 2
s Zapus_hudsonius.ZapHud_scaffold_11398                      16110 2 +     63895 TT
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 1 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202 0 +      8798 C
e Galago_senegalensis.k141_631886                             7400 0 +     11339 C
e Galago_moholi.ctg2040                                     429710 0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964 2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445 0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734 0 -     33856 C
e Perodicticus_potto.k141_1186926                              597 0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219 0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 12422 320 -     43706 T
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Tupaia_chinensis.KB320699.1                              2157208 1 +   4065304 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_40725                     822 276 +     27266 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   7643 0 +      8208 C
e Tarsius_wallacei.k141_254427                                1877 3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080 3 +     70052 I
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73921 0 +    116680 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Rattus_norvegicus.chr16                                 53571770 803 +  90668790 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Pteropus_alecto.KB030862.1                              22978014 7 +  28871421 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             2992 11 +     22620 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Otocyon_megalotis.JAEUCK010005147.1                       463984 325 -    559221 T
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odocoileus_virginianus.KZ100018.1                         145831 4 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869 0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414 0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947 0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9150892 182 -   9404916 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190536 0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_281845                        1211 12 +      1835 I
e Myotis_lucifugus.GL429869.1                              3905059 12 -   4330536 I
e Myotis_davidii.KB100139.1                                1588961 10 -   6019432 I
e Myotis_brandtii.KE162005.1                                279962 1755 -  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           8065 12 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398 7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             35221 4 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1851541 4 +   8254450 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                17111 17 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Lycaon_pictus.CM007581.1                                17956957 950 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Lasiurus_borealis.LasBor_scaffold_50988                    16384 22 +     29960 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Glis_glis.GliGli_scaffold_19807                            32178 0 +     49224 C
e Galagoides_demidoff.k141_1711393                            4689 0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2146969 11 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64769 0 +   2246927 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Crocidura_indochinensis.CroInd_scaffold_37019               4143 0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11668671 0 + 224834208 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1750 0 -      8501 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Cephalopachus_bancanus.k141_1423433                         6085 3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Carlito_syrichta.NW_007259797.1                           156587 3 -    496798 I
e Canis_lupus_orion.HG994398.1                            18502019 950 +  63665305 I
e Canis_lupus_familiaris.chr16                            17960717 950 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9036246 952 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     1546 950 -     43241 I
e CanFam4.chr16                                           17800803 952 -  60362399 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538 0 +      5281 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       9979  2 +     62944 a-----------------------------t
s Acinonyx_jubatus.LLWD01001279.1                           828578  2 -   1699592 a-----------------------------t
i Acinonyx_jubatus.LLWD01001279.1                        I 31 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     72555  2 +     87051 T-----------------------------T
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 7 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511878  2 -  29979442 a-----------------------------a
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 24 C 0
s Ailurus_fulgens.LNAC01001112.1                             80958  2 -    347723 a-----------------------------a
i Ailurus_fulgens.LNAC01001112.1                         I 24 C 0
s Allenopithecus_nigroviridis.k141_3361533                   17850  2 -     52922 A-----------------------------T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         17781  2 -     28001 A-----------------------------T
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8276  2 -     18505 A-----------------------------T
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9129  2 -     12518 A-----------------------------T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              9595  2 +     51355 A-----------------------------T
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                2700  2 -     36483 A-----------------------------T
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13157  2 +     28687 A-----------------------------T
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 1625  2 +     27940 A-----------------------------T
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            2707  2 -      9457 A-----------------------------T
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             1665  2 +     30492 A-----------------------------T
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              5660  2 +     47717 A-----------------------------T
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              2392  2 +      5663 A-----------------------------T
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             16844  2 +     50774 A-----------------------------T
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          676743  2 -   2318259 c-----------------------------a
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 269
s Anoura_caudifer.AnoCau_scaffold_1412                      186613 21 +    412891 T----------TTAAATTAATATTTTATAAT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             99222  2 -    100397 c-----------------------------a
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 I 270
s Aplodontia_rufa.AprRuf_scaffold_68852                      13894  2 +     20879 A-----------------------------T
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 2 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6015 25 +     43469 T----TT-AA-ATTTATCAATATTTTATCAT
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21209859  2 -  21539123 A-----------------------------T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               44655  2 -     48001 A-----------------------------T
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 27459  2 -     30947 A-----------------------------T
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9231  2 -     89868 A-----------------------------T
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              13615  2 -     40414 A-----------------------------T
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                21504  2 +     72325 A-----------------------------T
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193006 27 +  23207421 gtt-aaa-tttattaata-tttt-atataat
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         3471 27 -     18090 gtt-aaa-tttattaata-tttt-atataat
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    27649  2 +     34529 c-----------------------------a
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 270
s Bison_bison.KN261452.1                                    200740  2 -    288883 c-----------------------------a
i Bison_bison.KN261452.1                                 C 0 I 286
s Bos_indicus.CM003047.1                                  20273925  2 +  48749331 c-----------------------------a
i Bos_indicus.CM003047.1                                 C 0 I 286
s Bos_mutus.JH880303.1                                     1126485  2 -   1948126 c-----------------------------a
i Bos_mutus.JH880303.1                                   C 0 I 286
s Bos_taurus.CM000203.6                                   18084563  2 +  45695690 c-----------------------------a
i Bos_taurus.CM000203.6                                  C 0 I 286
s Bubalus_bubalis.KI419123.1                               2820239  2 +   4408762 c-----------------------------a
i Bubalus_bubalis.KI419123.1                             C 0 I 286
s Cacajao_ayresi.k141_552049                                102476  2 -    122966 A-----------------------------T
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   61981  2 +     81800 A-----------------------------T
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31161  2 -     95584 A-----------------------------T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55262  2 -    119600 A-----------------------------T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10003535  2 -  17673402 a-----------------------------t
i Camelus_bactrianus.KN276810.1                          I 25 C 0
s Camelus_dromedarius.KN272107.1                           2336011  2 -   7040546 a-----------------------------t
i Camelus_dromedarius.KN272107.1                         I 25 C 0
s Camelus_ferus.KB017975.1                                  404310  2 -   1652518 a-----------------------------t
i Camelus_ferus.KB017975.1                               I 25 C 0
s CanFam4.chr16                                           17801755  2 -  60362399 a-----------------------------a
i CanFam4.chr16                                          I 952 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     2496  2 -     43241 a-----------------------------a
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 950 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9037198  2 -   9314153 a-----------------------------a
i Canis_lupus_dingo.QKWQ01000480.1                       I 952 C 0
s Canis_lupus_familiaris.chr16                            17961667  2 -  59632846 a-----------------------------a
i Canis_lupus_familiaris.chr16                           I 950 C 0
s Canis_lupus_orion.HG994398.1                            18502969  2 +  63665305 a-----------------------------a
i Canis_lupus_orion.HG994398.1                           I 950 C 0
s Capra_aegagrus.CM003241.1                               18830857  2 +  46296322 c-----------------------------a
i Capra_aegagrus.CM003241.1                              C 0 I 269
s Capra_hircus.CM004588.1                                 18061577  2 -  44709034 c-----------------------------a
i Capra_hircus.CM004588.1                                C 0 I 269
s Capromys_pilorides.CapPil_scaffold_65020                    2202  2 -     12242 A-----------------------------T
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6355 25 -     11696 T----TT-AA-ATTTATCAACATTTTGTCAT
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138551  2 +    179628 A-----------------------------T
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     94833  2 +    217609 A-----------------------------T
i Catagonus_wagneri.CatWag_scaffold_2839                 I 25 C 0
s Cercocebus_atys.KQ010504.1                               4478811  2 +   4669795 a-----------------------------t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3305  2 +     17872 A-----------------------------T
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           3900  2 -     14043 A-----------------------------T
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          11995  2 +     27781 A-----------------------------T
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12141  2 -     20310 A-----------------------------T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15121  2 +     29689 A-----------------------------T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            9877  2 -     20078 A-----------------------------T
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          17792  2 -     27936 A-----------------------------T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            6661  2 -     17152 A-----------------------------T
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826391  2 +  39242232 A-----------------------------T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21225895  2 -  21565898 A-----------------------------T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43014  2 -     53127 A-----------------------------T
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3264  2 +     13442 A-----------------------------T
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       17810  2 -     27947 A-----------------------------T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                          839  2 +     10558 A-----------------------------T
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          3844  2 +     14005 A-----------------------------T
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1084  2 -     17098 A-----------------------------T
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                               960  2 +     17877 A-----------------------------T
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            158527  2 -    216457 A-----------------------------T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63002  2 +     76511 A-----------------------------T
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254121  2 +   2543920 a-----------------------------t
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_israelita.k141_747660                           99605  2 +    146308 A-----------------------------T
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          31413  2 -     50570 A-----------------------------T
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18431714  2 -  18827391 A-----------------------------T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18220  2 -     50209 A-----------------------------T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425219  2 + 135778131 a-----------------------------t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1913720  2 +   2368649 A-----------------------------C
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199951969  2 + 200372422 A-----------------------------C
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40245  2 +     84244 A-----------------------------C
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549295  2 -  53390261 A-----------------------------C
i Condylura_cristata.JH655891.1                          I 4 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1738 24 +     23735 G-----C-TT-AAATTAATAACTTACATAAT
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 51820  2 +     63868 A-----------------------------T
i Cricetomys_gambianus.CriGam_scaffold_18520             I 7 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29759  2 -     87169 A-----------------------------T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 28 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    838315  2 +   1526836 A-----------------------------T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37074  2 +     51376 A-----------------------------T
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16812653 25 +  35494412 gtt-aaa-tttattaata-tttt-ata-a-t
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8631365 23 +  20541912 ttt-aaactt-attaa--gttt--at-ca-t
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37616  2 +     67921 A-----------------------------T
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       311893  2 +    607251 c-----------------------------a
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 270
s Ellobius_lutescens.LOEQ01008920.1                          22336  2 -    110024 a-----------------------------t
i Ellobius_lutescens.LOEQ01008920.1                      I 7 C 0
s Ellobius_talpinus.LOJH01081419.1                            2242  2 +      8657 A-----------------------------T
i Ellobius_talpinus.LOJH01081419.1                       I 7 C 0
s Enhydra_lutris.KZ291758.1                               16330907  2 -  41312741 a-----------------------------a
i Enhydra_lutris.KZ291758.1                              I 25 C 0
s Eptesicus_fuscus.JH977646.1                              2146980  1 -  14770903 ------------------------------t
i Eptesicus_fuscus.JH977646.1                            I 11 C 0
s Erythrocebus_patas.Contig38                             21208387  2 -  21539334 A-----------------------------T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12318 27 +    133382 G--TTAA-AT-TTATTAATATTTTATATAAT
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             26271 27 -     44125 G--TTAA-GT-TTATTAATATTTTATATAAT
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20238221  2 + 206538554 a-----------------------------t
i Felis_catus.CM001381.2                                 I 31 C 0
s Felis_catus_fca126.CM031415.1                           20197064  2 + 205367284 a-----------------------------t
i Felis_catus_fca126.CM031415.1                          I 31 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 10818  2 -     36744 A-----------------------------T
i Felis_nigripes.FelNig_flattened_line_20823             I 31 C 0
s Fukomys_damarensis.KN121974.1                             851637  2 +   3816255 A-----------------------------T
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               2734  2 -      9135 A-----------------------------T
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     609856  2 -    660261 c-----------------------------a
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 I 270
s Gorilla_beringei.k141_3596273                              19221  2 -     32273 A-----------------------------T
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341357  2 + 186649187 a-----------------------------t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33861  2 +     78134 A-----------------------------T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243596  2 +    327341 A-----------------------------T
i Helogale_parvula.HelPar_flattened_line_2585            I 31 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 19070  2 +     36099 c-----------------------------a
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 I 269
s Heterocephalus_glaber.JH602082.1                        20663421  2 +  22651954 A-----------------------------T
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       111768 29 +   1711038 gtttaaa-tt-attaatacttttcatataat
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188                338 29 +      9903 GTTTAAA-TT-ATTAATACTTTTCATATAAT
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 C 0
s Hoolock_leuconedys.ctg274                                    438021  2 +    630532 A-----------------------------T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46300  2 +     55795 A-----------------------------T
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 29 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84310  2 +    135385 A-----------------------------T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7522207  2 -   7955117 a-----------------------------t
i Ictidomys_tridecemlineatus.JH393364.1                  I 2 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               23857 27 +     23964 G--TTAA-AT-TTATTAATATTTTATATAAT
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                3232 27 -      3359 G--TTAA-AT-TTATTAATATTTTATATAAT
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         15665  2 -     38430 A-----------------------------T
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    17634  1 -     42476 ------------------------------T
i Lasiurus_borealis.LasBor_scaffold_32767                I 24 C 0
s Leptonychotes_weddellii.KB714746.1                       3044360  2 +   3914936 a-----------------------------a
i Leptonychotes_weddellii.KB714746.1                     I 25 C 0
s Lepus_americanus.LepAme_scaffold_107385                     7992  2 -     14121 A-----------------------------T
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             268921 27 -    662738 gtt-aaa-tttattaata-tttt-atataat
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1440353  2 +   1826925 A-----------------------------T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17957907  2 -  59628241 a-----------------------------a
i Lycaon_pictus.CM007581.1                               I 950 C 0
s Macaca_arctoides.k141_2326796                              10163  2 +     40492 A-----------------------------T
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679417  2 +  60120075 A-----------------------------T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 15934  2 -     26193 A-----------------------------T
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            83710  2 -    114318 A-----------------------------T
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9401  2 -     23192 A-----------------------------T
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                18865  2 -     29190 A-----------------------------T
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27443  2 +     37952 A-----------------------------T
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842522  2 + 187317192 a-----------------------------t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461098  2 -  25927173 a-----------------------------t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83299  2 +     89720 A-----------------------------T
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10292  2 +     20474 A-----------------------------T
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10089  2 -     14993 A-----------------------------T
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  332951  2 -    668171 A-----------------------------T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8401  2 -     24072 a-----------------------------t
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29032  2 -     45290 A-----------------------------T
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91900 26 +     94391 G---CTT-AA-ATTATTAATATTTTTATAGT
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23940620  2 -  24302211 A-----------------------------T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354736  2 +    752769 A-----------------------------T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              19519  2 +    737560 a-----------------------------a
i Manis_javanica.JSZB01003497.1                          I 27 I 28
s Manis_pentadactyla.KN006162.1                              51537  2 -    317179 a-----------------------------a
i Manis_pentadactyla.KN006162.1                          I 27 I 28
s Marmota_marmota.CZRN01000018.1                          33104494  2 -  40650429 a-----------------------------t
i Marmota_marmota.CZRN01000018.1                         I 2 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        14588 27 -    207569 G--TTTA-AA-TCATTAATATTTTATATAAC
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             11619  2 +     13704 a-----------------------------a
i Mellivora_capensis.MelCap_flattened_line_69365         I 25 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 34570  2 +    140813 A-----------------------------T
i Meriones_unguiculatus.MerUng_scaffold_7390             I 7 C 0
s Mesocricetus_auratus.KB708134.1                         12184041  2 -  29670104 A-----------------------------T
i Mesocricetus_auratus.KB708134.1                        I 7 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    4527 27 +     10310 G--TTAA-AT-TTATTAATATTTTATATAAT
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                17128  1 -     19307 ------------------------------T
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 17 C 0
s Microtus_ochrogaster.CM001695.1                         11262318  2 -  27267610 a-----------------------------t
i Microtus_ochrogaster.CM001695.1                        I 7 C 0
s Miopithecus_ogouensis.k141_534055                          12296  2 -     28506 A-----------------------------T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         7228  2 -      8324 a-----------------------------a
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 25 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    28036 25 -    437263 G----TT-AA-ATTTATTAATATTTTATAAT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142909 25 -    366855 G----TT-AG-ATTTATTAATATGTTATAAT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   1935  2 +     82753 c-----------------------------a
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 255
s Murina_feae.MurFea_scaffold_85699                           8077  1 +     14753 ------------------------------T
i Murina_feae.MurFea_scaffold_85699                      I 12 C 0
s Mus_caroli.LT608237.1                                   84362951  2 - 120012414 a-----------------------------t
i Mus_caroli.LT608237.1                                  I 7 C 0
s Mus_musculus.chr8                                       87652450  2 - 129401213 A-----------------------------T
i Mus_musculus.chr8                                      I 7 C 0
s Mus_pahari.LT608297.1                                   31357184  2 -  89631738 a-----------------------------t
i Mus_pahari.LT608297.1                                  I 7 C 0
s Mus_spretus.CM004101.1                                  90754941  2 - 130317789 a-----------------------------t
i Mus_spretus.CM004101.1                                 I 7 C 0
s Mustela_putorius.JH418006.1                               303014  2 -  14710649 a-----------------------------a
i Mustela_putorius.JH418006.1                            I 25 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     72384  2 -     80779 A-----------------------------T
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                281717  1 -  10118263 ------------------------------t
i Myotis_brandtii.KE162005.1                             I 1755 C 0
s Myotis_davidii.KB100139.1                                1588971  1 -   6019432 ------------------------------t
i Myotis_davidii.KB100139.1                              I 10 C 0
s Myotis_lucifugus.GL429869.1                              3905071  1 -   4330536 ------------------------------t
i Myotis_lucifugus.GL429869.1                            I 12 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                        1223  1 +      1835 ------------------------------T
i Myotis_myotis.MyoMyo_scaffold_281845                   I 12 C 0
s Nannospalax_galili.KL204047.1                            2036754  2 -   3037898 A-----------------------------T
i Nannospalax_galili.KL204047.1                          I 7 C 0
s Nasalis_larvatus.k141_413338                               18352  2 +     21681 A-----------------------------C
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308821  2 +  31847680 a-----------------------------a
i Neomonachus_schauinslandi.NINY01007730.1               I 25 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5867005 25 +   7148211 gtt-aaa-tttattaa-aatttt-ata-a-t
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    759114 25 +    783361 G----TT-AA-ATTTATTAATGTTTTATAAT
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150710  2 -   9404916 a-----------------------------a
i Nyctereutes_procyonoides.CAJHUB010000658.1             T 182 C 0
s Ochotona_princeps.JH802162.1                             1365435  2 +   3988456 a-----------------------------t
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              507963  2 -   2017862 a-----------------------------a
i Odobenus_rosmarus.KB229312.1                           I 25 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          77767  2 -    150152 c-----------------------------a
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 270
s Ondatra_zibethicus.OndZib_scaffold_46174                   26957  2 +     28053 A-----------------------------T
i Ondatra_zibethicus.OndZib_scaffold_46174               I 7 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    81970  2 +    102263 A-----------------------------T
i Onychomys_torridus.OnyTor_scaffold_2986                I 7 C 0
s Orcinus_orca.KB316932.1                                  2782914 27 -  10937097 gtt-aaa-tttattaata-tttt-atataat
i Orcinus_orca.KB316932.1                                C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67148893  2 + 174332312 a-----------------------------t
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       463659  2 -    559221 a-----------------------------a
i Otocyon_megalotis.JAEUCK010005147.1                    T 325 C 0
s Ovis_aries.CM001607.2                                   17587043  2 +  44047080 c-----------------------------a
i Ovis_aries.CM001607.2                                  C 0 I 269
s Ovis_canadensis.OviCan_scaffold_2572                      175028  2 -    191736 c-----------------------------a
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 I 269
s Pan_paniscus.KQ411613.1                                    47322  2 +     80009 a-----------------------------t
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146192  2 + 189151597 a-----------------------------t
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152426  2 +    230217 A-----------------------------T
i Panthera_onca.PanOnc_flattened_line_3271               I 31 C 0
s Panthera_pardus.KV860321.1                                265635  2 +  18783137 a-----------------------------t
i Panthera_pardus.KV860321.1                             I 31 C 0
s Panthera_tigris.KE722367.1                               4722515  2 -   8748460 a-----------------------------t
i Panthera_tigris.KE722367.1                             I 31 C 0
s Pantholops_hodgsonii.KE114653.1                          1265932  2 -   2937107 c-----------------------------a
i Pantholops_hodgsonii.KE114653.1                        C 0 I 270
s Papio_anubis.CM001495.2                                183446426  2 + 183742232 a-----------------------------t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10076  2 +     20448 A-----------------------------T
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20566884  2 +  20919399 A-----------------------------T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   8816  2 +     41871 A-----------------------------T
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12109  2 +     27711 A-----------------------------T
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3108  2 -     11374 A-----------------------------T
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13917  2 -     78924 A-----------------------------T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 28 C 0
s Peromyscus_maniculatus.KI615324.1                       18196596  2 -  18517816 A-----------------------------T
i Peromyscus_maniculatus.KI615324.1                      I 5 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     29355  2 -     29689 A-----------------------------T
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               9959 25 +     63832 G----TT-AA-ATTTATTAAAATTTTATAAT
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            1424  2 +     68526 A-----------------------------C
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        41570  2 +     89929 A-----------------------------C
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            42984  2 +     51399 A-----------------------------C
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299221  2 -  14605196 A-----------------------------C
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3003  1 +     22620 ------------------------------T
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 11 C 0
s Pithecia_albicans.k141_1476471                              4867  2 +     26961 A-----------------------------T
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1012  2 +     23417 A-----------------------------T
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                4859  2 +     29694 A-----------------------------T
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          29885  2 +     52772 A-----------------------------T
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           4881  2 +     26198 A-----------------------------T
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3941429  2 +   4542175 A-----------------------------T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            4845  2 -     23490 A-----------------------------T
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9101  2 -     39866 A-----------------------------T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18267  2 +     34906 A-----------------------------T
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       22531  2 +     87950 A-----------------------------T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23358  2 +     88961 A-----------------------------T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9029  2 +     39403 A-----------------------------T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          22810  2 -     87928 A-----------------------------T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         29769  2 +     60166 A-----------------------------T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      29966  2 +     67232 A-----------------------------T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          25439  2 +     90634 A-----------------------------T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          22811  2 -     89403 A-----------------------------T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189134338  2 + 189387572 a-----------------------------t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9573947  2 +   9816681 A-----------------------------T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76536  2 -     81375 A-----------------------------C
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8353  2 +     19060 A-----------------------------C
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            12211  2 -     21651 A-----------------------------T
i Psammomys_obesus.NESX01036370.1                        I 7 C 0
s Pteronotus_parnellii.KE909381.1                            16397 25 -     21811 gtt-acc-tttattaata-tttt-at-ca-t
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41821  2 +     42204 A-----------------------------A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 25 C 0
s Puma_concolor.QAVW01001104.1                            20275585  2 -  38429054 a-----------------------------t
i Puma_concolor.QAVW01001104.1                           I 31 C 0
s Pygathrix_cinerea.k141_1153803                             18338  2 -     91421 A-----------------------------C
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612461  2 +   7812017 A-----------------------------C
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18368  2 -     72585 A-----------------------------C
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6513  2 +     55207 c-----------------------------a
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 270
s Rhinolophus_sinicus.LVEH01000134.1                        368242 17 -   3329780 gtttaaa-tt-attaata------------t
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                            10036  2 -     11128 A-----------------------------C
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239404  2 - 195417433 A-----------------------------C
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675051  2 +   7961872 A-----------------------------C
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89086  1 -     96226 G------------------------------
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 22
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154442  2 -    313613 A-----------------------------C
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 4 C 0
s Semnopithecus_entellus.k141_1672505                         3210  2 -     12572 A-----------------------------C
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30062  2 +     39453 A-----------------------------C
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           10570  2 +     27826 A-----------------------------C
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10106  2 -     19483 A-----------------------------C
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3409  2 -     12762 A-----------------------------C
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3257  2 +     13763 A-----------------------------C
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     2121  2 -     30804 A-----------------------------T
i Sigmodon_hispidus.SigHis_scaffold_42075                I 10 C 0
s Sorex_araneus.JH798187.1                                13652243  2 -  18376816 a-----------------------------t
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1955353  2 -   3870691 a-----------------------------t
i Spermophilus_dauricus.KZ294078.1                       I 2 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             32297  2 +     97271 a-----------------------------a
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 24 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              19596  2 -    196729 A-----------------------------T
i Suricata_suricatta.SurSur_flattened_line_6629          I 31 C 0
s Sus_scrofa.CM000828.4                                    6812403  2 +  69701581 a-----------------------------t
i Sus_scrofa.CM000828.4                                  I 25 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                12068 27 +     41958 A--TTAA-AT-TTATTAATATTTTATATAAT
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Theropithecus_gelada.CM009954.1                        186431732  2 + 186847797 a-----------------------------t
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106657  2 +    114563 A-----------------------------T
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     82455 25 +    610378 T----TT-AA-ATTTATCAATATTTTATCAT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         14155  2 -     20410 A-----------------------------C
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3271  2 -     12674 A-----------------------------C
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14263  2 +     19930 A-----------------------------C
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      10658  2 -     19997 A-----------------------------C
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            50805  2 -     60166 A-----------------------------C
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18266  2 -     27529 A-----------------------------C
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                          6  1 +      9229 T------------------------------
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          11909  1 -     21137 t------------------------------
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                   10628  2 -     10723 A-----------------------------C
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         9805  2 +      9834 A-----------------------------C
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28128  2 +     32220 A-----------------------------C
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942225  2 +   6242583 A-----------------------------C
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11478  2 +     20839 A-----------------------------C
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15739156 27 +  33153633 gtt-aaa-tttattaata-tttt-atataat
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54543  2 -     77625 A-----------------------------T
i Uropsilus_gracilis.UroGra_scaffold_12083               I 4 C 0
s Ursus_maritimus.KK499267.1                               4851681  2 -   5085361 a-----------------------------a
i Ursus_maritimus.KK499267.1                             I 25 C 0
s Vicugna_pacos.KN270157.1                                 5373054  2 -   5488506 a-----------------------------t
i Vicugna_pacos.KN270157.1                               I 25 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 12102  2 -     43706 A-----------------------------A
i Vulpes_lagopus.VulLag_flattened_line_30954             T 320 C 0
s Xerus_inauris.XerIna_scaffold_2302                          2356  2 +    224448 A-----------------------------T
i Xerus_inauris.XerIna_scaffold_2302                     I 2 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      16112  0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Tupaia_chinensis.KB320699.1                              2157208  1 +   4065304 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_40725                     822 276 +     27266 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   7643  0 +      8208 C
e Tarsius_wallacei.k141_254427                                1877  3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080  3 +     70052 I
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73921  0 +    116680 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Rattus_norvegicus.chr16                                 53571770 803 +  90668790 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Pteropus_alecto.KB030862.1                              22978014  7 +  28871421 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odocoileus_virginianus.KZ100018.1                         145831  4 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190536  0 +    196477 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             35221  4 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1851541  4 +   8254450 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Jaculus_jaculus.JH725527.1                               8278370  0 -   9596543 C
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Glis_glis.GliGli_scaffold_19807                            32178  0 +     49224 C
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64769  0 +   2246927 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Crocidura_indochinensis.CroInd_scaffold_37019               4143  0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1750  0 -      8501 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Cephalopachus_bancanus.k141_1423433                         6085  3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Carlito_syrichta.NW_007259797.1                           156587  3 -    496798 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Allactaga_bullata.AllBul_scaffold_9566                     75669  0 -     89534 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       9981 3 +     62944 ttt
s Acinonyx_jubatus.LLWD01001279.1                           828580 3 -   1699592 ttt
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     72557 2 +     87051 -TT
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511880 3 -  29979442 ttt
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 8
s Ailurus_fulgens.LNAC01001112.1                             80960 3 -    347723 ttt
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 8
s Allenopithecus_nigroviridis.k141_3361533                   17852 3 -     52922 TTT
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         17783 3 -     28001 TTT
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8278 3 -     18505 TTT
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9131 3 -     12518 TTT
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              9597 3 +     51355 TTT
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                2702 3 -     36483 TTT
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13159 3 +     28687 TTT
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 1627 3 +     27940 TTT
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            2709 3 -      9457 TTT
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             1667 3 +     30492 TTT
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              5662 3 +     47717 TTT
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              2394 3 +      5663 TTT
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             16846 3 +     50774 TTT
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          677014 3 -   2318259 ttc
i Ammotragus_lervia.NIVO01071767.1                       I 269 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      186634 3 +    412891 TTT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             99494 3 -    100397 TTC
i Antilocapra_americana.AntAmePen_scaffold_12469         I 270 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13896 3 +     20879 ATA
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6040 3 +     43469 TTT
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21209861 3 -  21539123 TTT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               44657 3 -     48001 TTT
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 27461 3 -     30947 TTT
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9233 3 -     89868 TTT
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              13617 3 -     40414 TTT
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                21506 3 +     72325 TTT
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193033 3 +  23207421 ttc
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         3498 3 -     18090 ttc
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    27921 3 +     34529 TTC
i Beatragus_hunteri.BeaHun_scaffold_50177                I 270 C 0
s Bison_bison.KN261452.1                                    201028 3 -    288883 ttc
i Bison_bison.KN261452.1                                 I 286 C 0
s Bos_indicus.CM003047.1                                  20274213 3 +  48749331 ttc
i Bos_indicus.CM003047.1                                 I 286 C 0
s Bos_mutus.JH880303.1                                     1126773 3 -   1948126 ttc
i Bos_mutus.JH880303.1                                   I 286 C 0
s Bos_taurus.CM000203.6                                   18084851 3 +  45695690 ttc
i Bos_taurus.CM000203.6                                  I 286 C 0
s Bubalus_bubalis.KI419123.1                               2820527 3 +   4408762 ttc
i Bubalus_bubalis.KI419123.1                             I 286 C 0
s Cacajao_ayresi.k141_552049                                102478 3 -    122966 TTT
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   61983 3 +     81800 TTT
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31163 3 -     95584 TTT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55264 3 -    119600 TTT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10003537 3 -  17673402 ttc
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2336013 3 -   7040546 ttc
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  404312 3 -   1652518 ttc
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17801757 3 -  60362399 ttt
i CanFam4.chr16                                          C 0 I 8
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     2498 3 -     43241 ttt
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 I 8
s Canis_lupus_dingo.QKWQ01000480.1                         9037200 3 -   9314153 ttt
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 8
s Canis_lupus_familiaris.chr16                            17961669 3 -  59632846 ttt
i Canis_lupus_familiaris.chr16                           C 0 I 8
s Canis_lupus_orion.HG994398.1                            18502971 3 +  63665305 ttt
i Canis_lupus_orion.HG994398.1                           C 0 I 8
s Capra_aegagrus.CM003241.1                               18831128 3 +  46296322 TTC
i Capra_aegagrus.CM003241.1                              I 269 C 0
s Capra_hircus.CM004588.1                                 18061848 3 -  44709034 TTC
i Capra_hircus.CM004588.1                                I 269 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    2204 3 -     12242 TTC
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6380 3 -     11696 TTT
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138553 3 +    179628 TTT
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     94835 3 +    217609 TTC
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cercocebus_atys.KQ010504.1                               4478813 3 +   4669795 ttt
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3307 3 +     17872 TTT
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           3902 3 -     14043 TTT
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          11997 3 +     27781 TTT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12143 3 -     20310 TTT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15123 3 +     29689 TTT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            9879 3 -     20078 TTT
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          17794 3 -     27936 TTT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            6663 3 -     17152 TTT
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826393 3 +  39242232 TTT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21225897 3 -  21565898 TTT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43016 3 -     53127 TTT
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3266 3 +     13442 TTT
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       17812 3 -     27947 TTT
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                          841 3 +     10558 TTT
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          3846 3 +     14005 TTT
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1086 3 -     17098 TTT
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                               962 3 +     17877 TTT
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            158529 3 -    216457 TTT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63004 3 +     76511 TTT
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254123 3 +   2543920 ttc
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_israelita.k141_747660                           99607 3 +    146308 TTT
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          31415 3 -     50570 TTT
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18431716 3 -  18827391 TTT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18222 3 -     50209 TTT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425221 3 + 135778131 ttt
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1913722 3 +   2368649 TTT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199951971 3 + 200372422 TTT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40247 3 +     84244 TTT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549297 3 -  53390261 TTT
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1762 3 +     23735 TTT
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 51822 3 +     63868 TTT
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29761 3 -     87169 TTT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    838317 3 +   1526836 TTT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37076 3 +     51376 TTC
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16812678 3 +  35494412 ttc
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8631388 3 +  20541912 ttt
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37618 3 +     67921 TTT
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       312165 3 +    607251 ttc
i Elaphurus_davidianus.JRFZ01104969.1                    I 270 I 1
s Ellobius_lutescens.LOEQ01008920.1                          22338 3 -    110024 tta
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                            2244 3 +      8657 TTA
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16330909 3 -  41312741 ttt
i Enhydra_lutris.KZ291758.1                              C 0 I 8
s Eptesicus_fuscus.JH977646.1                              2146981 3 -  14770903 ttt
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Erythrocebus_patas.Contig38                             21208389 3 -  21539334 TTT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12345 3 +    133382 TTC
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             26298 3 -     44125 TTC
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20238223 3 + 206538554 ttt
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20197066 3 + 205367284 ttt
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 10820 3 -     36744 TTT
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             851639 3 +   3816255 TTC
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               2736 3 -      9135 TTT
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     610128 3 -    660261 ttc
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 270 C 0
s Gorilla_beringei.k141_3596273                              19223 3 -     32273 TTT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341359 3 + 186649187 ttt
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33863 3 +     78134 GTA
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243598 3 +    327341 TTT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 19341 3 +     36099 TTC
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 269 C 0
s Heterocephalus_glaber.JH602082.1                        20663423 3 +  22651954 TTC
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       111797 3 +   1711038 ttc
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188                367 3 +      9903 TTC
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 C 0
s Hoolock_leuconedys.ctg274                                    438023 3 +    630532 TTT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46302 3 +     55795 TTC
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84312 3 +    135385 TTC
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7522209 3 -   7955117 gta
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               23884 3 +     23964 TCC
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                3259 3 -      3359 TTC
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         15667 3 -     38430 TTT
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    17635 3 -     42476 CTT
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3044362 3 +   3914936 ttt
i Leptonychotes_weddellii.KB714746.1                     C 0 I 8
s Lepus_americanus.LepAme_scaffold_107385                     7994 3 -     14121 TTA
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             268948 3 -    662738 ttc
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1440355 3 +   1826925 TTT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17957909 3 -  59628241 ttt
i Lycaon_pictus.CM007581.1                               C 0 I 8
s Macaca_arctoides.k141_2326796                              10165 3 +     40492 TTT
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679419 3 +  60120075 TTT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 15936 3 -     26193 TTT
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            83712 3 -    114318 TTT
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9403 3 -     23192 TTT
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                18867 3 -     29190 TTT
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27445 3 +     37952 TTT
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842524 3 + 187317192 ttt
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461100 3 -  25927173 ttt
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83301 3 +     89720 TTT
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10294 3 +     20474 TTT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10091 3 -     14993 TTT
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  332953 3 -    668171 TTT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8403 3 -     24072 ttt
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29034 3 -     45290 TTT
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91926 3 +     94391 TTT
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23940622 3 -  24302211 TTC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354738 3 +    752769 TTT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33104496 3 -  40650429 gta
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        14615 3 -    207569 TGT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             11621 3 +     13704 ttt
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 8
s Meriones_unguiculatus.MerUng_scaffold_7390                 34572 3 +    140813 TTA
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12184043 3 -  29670104 TTA
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    4554 3 +     10310 TTC
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                17129 3 -     19307 TGT
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11262320 3 -  27267610 tta
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miopithecus_ogouensis.k141_534055                          12298 3 -     28506 TTT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         7230 3 -      8324 ttt
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 8
s Monodon_monoceros.MonMon_M_scaffold_103                    28061 3 -    437263 TTC
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142934 3 -    366855 TTT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   2192 3 +     82753 TTC
i Moschus_moschiferus.MosMos_scaffold_13123              I 255 C 0
s Murina_feae.MurFea_scaffold_85699                           8078 3 +     14753 TTT
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84362953 3 - 120012414 tta
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87652452 3 - 129401213 TTA
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31357186 3 -  89631738 tta
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90754943 3 - 130317789 tta
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               303016 3 -  14710649 ttt
i Mustela_putorius.JH418006.1                            C 0 I 7
s Myocastor_coypus.MyoCoy_scaffold_10123                     72386 3 -     80779 TCC
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                281718 3 -  10118263 ttt
i Myotis_brandtii.KE162005.1                             C 0 T 1743
s Myotis_davidii.KB100139.1                                1588972 3 -   6019432 ttt
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3905072 3 -   4330536 ttt
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                        1224 3 +      1835 TTT
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 C 0
s Nannospalax_galili.KL204047.1                            2036756 2 -   3037898 TT-
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               18354 3 +     21681 TTT
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308823 3 +  31847680 ttt
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 8
s Neophocaena_asiaeorientalis.KZ687982.1                   5867030 3 +   7148211 ttc
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    759139 3 +    783361 TTT
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150712 3 -   9404916 ttt
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 2
s Ochotona_princeps.JH802162.1                             1365437 3 +   3988456 tta
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              507965 3 -   2017862 ttt
i Odobenus_rosmarus.KB229312.1                           C 0 I 8
s Odocoileus_virginianus.KZ100018.1                         145835 3 +    630418 ttc
i Odocoileus_virginianus.KZ100018.1                      I 4 I 1
s Okapia_johnstoni.LVCL01S0005463.1                          78039 3 -    150152 ttc
i Okapia_johnstoni.LVCL01S0005463.1                      I 270 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   26959 3 +     28053 TTA
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    81972 2 +    102263 -TA
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2782941 3 -  10937097 ttc
i Orcinus_orca.KB316932.1                                C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67148895 3 + 174332312 tta
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       463661 3 -    559221 ttt
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 2
s Ovis_aries.CM001607.2                                   17587314 3 +  44047080 ttc
i Ovis_aries.CM001607.2                                  I 269 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      175299 3 -    191736 TTC
i Ovis_canadensis.OviCan_scaffold_2572                   I 269 C 0
s Pan_paniscus.KQ411613.1                                    47324 3 +     80009 ttt
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146194 3 + 189151597 ttt
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152428 3 +    230217 TTC
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                265637 3 +  18783137 ttt
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4722517 3 -   8748460 ttt
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1266204 3 -   2937107 ttc
i Pantholops_hodgsonii.KE114653.1                        I 270 C 0
s Papio_anubis.CM001495.2                                183446428 3 + 183742232 ttt
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10078 3 +     20448 TTT
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20566886 3 +  20919399 TTT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   8818 3 +     41871 TTT
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12111 3 +     27711 TTT
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3110 3 -     11374 TTT
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13919 3 -     78924 TTT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18196598 3 -  18517816 TTA
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     29357 3 -     29689 TTC
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               9984 3 +     63832 TTC
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            1426 3 +     68526 TTT
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        41572 3 +     89929 TTT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            42986 3 +     51399 TTT
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299223 3 -  14605196 TTT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3004 3 +     22620 TTT
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pithecia_albicans.k141_1476471                              4869 3 +     26961 TTT
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1014 3 +     23417 TTT
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                4861 3 +     29694 TTT
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          29887 3 +     52772 TTT
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           4883 3 +     26198 TTT
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3941431 3 +   4542175 TTT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            4847 3 -     23490 TTT
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9103 3 -     39866 TTT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18269 3 +     34906 TTT
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       22533 3 +     87950 TTT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23360 3 +     88961 TTT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9031 3 +     39403 TTT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          22812 3 -     87928 TTT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         29771 3 +     60166 TTT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      29968 3 +     67232 TTT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          25441 3 +     90634 TTT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          22813 3 -     89403 TTT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189134340 3 + 189387572 ttt
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9573949 3 +   9816681 TTT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76538 3 -     81375 TTT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8355 3 +     19060 TTT
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            12213 3 -     21651 TTA
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            16422 3 -     21811 ttt
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41823 3 +     42204 TTT
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 8
s Pteropus_alecto.KB030862.1                              22978021 2 +  28871421 -NN
i Pteropus_alecto.KB030862.1                             I 7 I 3
s Puma_concolor.QAVW01001104.1                            20275587 3 -  38429054 ttt
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             18340 3 -     91421 TTT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612463 3 +   7812017 TTT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18370 3 -     72585 TTT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6785 3 +     55207 TTC
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 270 I 1
s Rhinolophus_sinicus.LVEH01000134.1                        368259 3 -   3329780 ttc
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                            10038 3 -     11128 TTT
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239406 3 - 195417433 TTT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675053 3 +   7961872 TTT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89109 2 -     96226 -TT
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 22 I 3
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154444 3 -    313613 TTT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                         3212 3 -     12572 TTT
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30064 3 +     39453 TTT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           10572 3 +     27826 TTT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10108 3 -     19483 TTT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3411 3 -     12762 TTT
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3259 3 +     13763 TTT
i Semnopithecus_vetulus.k141_910252                      C 0 I 1
s Sigmodon_hispidus.SigHis_scaffold_42075                     2123 3 -     30804 TTA
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Sorex_araneus.JH798187.1                                13652245 3 -  18376816 att
i Sorex_araneus.JH798187.1                               C 0 I 17
s Spermophilus_dauricus.KZ294078.1                         1955355 3 -   3870691 gta
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             32299 3 +     97271 ttg
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 8
s Suricata_suricatta.SurSur_flattened_line_6629              19598 3 -    196729 TTT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6812405 3 +  69701581 ttc
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                12095 3 +     41958 TTT
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Theropithecus_gelada.CM009954.1                        186431734 3 + 186847797 ttt
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106659 3 +    114563 TTC
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     82480 3 +    610378 TGT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         14157 3 -     20410 TTT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3273 3 -     12674 TTT
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14265 3 +     19930 TTT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      10660 3 -     19997 TTT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            50807 3 -     60166 TTT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18268 3 -     27529 TTT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                   10630 3 -     10723 TTT
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         9807 3 +      9834 TTT
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28130 3 +     32220 TAT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942227 3 +   6242583 TTT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11480 3 +     20839 TTT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    1098 3 +     27266 TAC
i Tragulus_javanicus.TraJav_scaffold_40725               I 276 C 0
s Tursiops_truncatus.MRVK01000835.1                       15739183 3 +  33153633 ttc
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54545 3 -     77625 GTT
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4851683 3 -   5085361 ttt
i Ursus_maritimus.KK499267.1                             C 0 I 8
s Vicugna_pacos.KN270157.1                                 5373056 3 -   5488506 ttc
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 12104 3 -     43706 TTT
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 2
s Xerus_inauris.XerIna_scaffold_2302                          2358 3 +    224448 ATA
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202 0 +      8798 C
e Galago_senegalensis.k141_631886                             7400 0 +     11339 C
e Galago_moholi.ctg2040                                     429710 0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964 2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445 0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734 0 -     33856 C
e Perodicticus_potto.k141_1186926                              597 0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219 0 -      3244 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      16112 0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Tupaia_chinensis.KB320699.1                              2157208 1 +   4065304 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Trachypithecus_laotum.k141_907409                          11910 0 -     21137 C
e Trachypithecus_hatinhensis.k141_17719                          7 0 +      9229 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   7643 0 +      8208 C
e Tarsius_wallacei.k141_254427                                1877 3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080 3 +     70052 I
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73921 0 +    116680 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Rattus_norvegicus.chr16                                 53571770 803 +  90668790 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869 0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414 0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947 0 - 196305487 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190536 0 +    196477 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398 7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             35221 4 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1851541 4 +   8254450 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Manis_pentadactyla.KN006162.1                              51539 28 -    317179 I
e Manis_javanica.JSZB01003497.1                              19521 28 +    737560 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Jaculus_jaculus.JH725527.1                               8278370 0 -   9596543 C
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Glis_glis.GliGli_scaffold_19807                            32178 0 +     49224 C
e Galagoides_demidoff.k141_1711393                            4689 0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64769 0 +   2246927 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Crocidura_indochinensis.CroInd_scaffold_37019               4143 0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11668671 0 + 224834208 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1750 0 -      8501 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Cephalopachus_bancanus.k141_1423433                         6085 3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Carlito_syrichta.NW_007259797.1                           156587 3 -    496798 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538 0 +      5281 C
e Allactaga_bullata.AllBul_scaffold_9566                     75669 0 -     89534 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       9984 10 +     62944 at-t-aa--at----A---------------G----T
s Acinonyx_jubatus.LLWD01001279.1                           828583  9 -   1699592 at-t-at--ag----a---------------t-----
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     72559 12 +     87051 AT-T-ACTAGT----A---------------A----C
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511891  8 -  29979442 ac-t-ta--ac----a---------------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 8 I 7
s Ailurus_fulgens.LNAC01001112.1                             80971  8 -    347723 ac-t-ta--ac----a---------------------
i Ailurus_fulgens.LNAC01001112.1                         I 8 I 7
s Allenopithecus_nigroviridis.k141_3361533                   17855 10 -     52922 AT-T-AA--AT----A---------------G----T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         17786 10 -     28001 AT-T-AA--AT----A---------------G----T
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8281 10 -     18505 AT-T-AA--AT----A---------------G----T
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9134 10 -     12518 AT-T-AA--AT----A---------------G----T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              9600 10 +     51355 AT-T-AA--AC----A---------------G----T
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                2705 10 -     36483 AT-T-AA--AC----A---------------G----T
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13162 10 +     28687 AT-T-AA--AC----A---------------G----T
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 1630 10 +     27940 AT-T-AA--AC----A---------------G----T
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            2712 10 -      9457 AT-T-AA--AC----A---------------G----T
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             1670 10 +     30492 AT-T-AA--AC----A---------------G----T
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              5665 10 +     47717 AT-T-AA--AC----A---------------G----T
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              2397 10 +      5663 AT-T-AA--AC----A---------------G----T
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             16849 10 +     50774 AT-T-AA--AC----A---------------G----T
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          677017 10 -   2318259 at-t-at--ac----a---------------t----t
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      186637 10 +    412891 AT-T-AT--AT----A---------------T----T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             99497 10 -    100397 AT-T-AT--AC----A---------------T----T
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13899  8 +     20879 AT-T-T----T----A---------------C----T
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6043 10 +     43469 AT-T-AC--AT----A---------------T----T
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21209864 10 -  21539123 AT-T-AA--AC----A---------------G----T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               44660 10 -     48001 AT-T-AA--AC----A---------------C----T
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 27464 10 -     30947 AT-T-AA--AC----A---------------G----T
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9236 10 -     89868 AT-T-AA--AC----A---------------G----T
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              13620 10 -     40414 AT-T-AA--AC----A---------------G----T
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                21509 10 +     72325 AT-T-AA--AC----A---------------G----T
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193036 10 +  23207421 at-t-ac--ac----a---------------t----t
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         3501 10 -     18090 at-t-ac--aC----A---------------T----T
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    27924 10 +     34529 AT-T-TT--AT----A---------------T----T
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 176
s Bison_bison.KN261452.1                                    201031 10 -    288883 at-t-at--aC----A---------------T----T
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20274216 10 +  48749331 at-t-at--ac----a---------------t----t
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1126776 10 -   1948126 at-t-at--ac----A---------------T----T
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18084854 10 +  45695690 at-t-at--ac----a---------------t----t
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2820530 10 +   4408762 at-t-at--ac----A---------------T----T
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                102481 10 -    122966 AT-T-AA--AC----A---------------G----T
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   61986 10 +     81800 AT-T-AA--AC----A---------------G----T
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31166 10 -     95584 AT-T-AA--AC----A---------------G----T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55267 10 -    119600 AT-T-AA--AC----A---------------G----T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10003540 10 -  17673402 at-t-ac--at----g---------------t----t
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2336016 10 -   7040546 at-t-ac--at----a---------------t----t
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  404315 10 -   1652518 at-t-ac--at----a---------------t----t
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17801768  8 -  60362399 cc-t-aa--ac----a---------------------
i CanFam4.chr16                                          I 8 I 7
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     2509  8 -     43241 cc-t-aa--ac----a---------------------
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 8 I 7
s Canis_lupus_dingo.QKWQ01000480.1                         9037211  8 -   9314153 cc-t-aa--ac----a---------------------
i Canis_lupus_dingo.QKWQ01000480.1                       I 8 I 7
s Canis_lupus_familiaris.chr16                            17961680  8 -  59632846 cc-t-aa--ac----a---------------------
i Canis_lupus_familiaris.chr16                           I 8 I 7
s Canis_lupus_orion.HG994398.1                            18502982  8 +  63665305 cc-t-aa--ac----a---------------------
i Canis_lupus_orion.HG994398.1                           I 8 I 7
s Capra_aegagrus.CM003241.1                               18831131 10 +  46296322 AT-T-AT--AC----A---------------T----T
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18061851 10 -  44709034 AT-T-AT--AC----A---------------T----T
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    2207 10 -     12242 AT-T-AA--GT----A---------------G----T
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6383 10 -     11696 AT-T-AC--AT----A---------------T----T
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138556  9 +    179628 AT-T-AA--AT----A---------------A-----
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 1
s Catagonus_wagneri.CatWag_scaffold_2839                     94838 13 +    217609 AT-T-AC--ATATT-A---------------T----T
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cercocebus_atys.KQ010504.1                               4478816 10 +   4669795 at-t-aa--at----a---------------g----t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3310 10 +     17872 AT-T-AA--AT----A---------------G----T
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           3905 10 -     14043 AT-T-AA--AT----A---------------G----T
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12000 10 +     27781 AT-T-AA--AT----A---------------G----T
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12146 10 -     20310 AT-T-AA--AT----A---------------G----T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15126 10 +     29689 AT-T-AA--AT----A---------------G----T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            9882 10 -     20078 AT-T-AA--AT----A---------------G----T
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          17797 10 -     27936 AT-T-AA--AT----A---------------G----T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            6666 10 -     17152 AT-T-AA--AT----A---------------G----T
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826396 10 +  39242232 AT-T-AA--AT----A---------------G----T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21225900 10 -  21565898 AT-T-AA--AT----A---------------G----T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43019 10 -     53127 AT-T-AA--AT----A---------------G----T
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3269 10 +     13442 AT-T-AA--AT----A---------------G----T
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       17815 10 -     27947 AT-T-AA--AT----A---------------G----T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                          844 10 +     10558 AT-T-AA--AT----A---------------G----T
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          3849 10 +     14005 AT-T-AA--AT----A---------------G----T
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1089 10 -     17098 AT-T-AA--AC----A---------------G----T
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                               965 10 +     17877 AT-T-AA--AC----A---------------G----T
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            158532 10 -    216457 AT-T-AA--AC----A---------------G----T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63007 10 +     76511 AT-T-AA--AC----A---------------G----T
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254126 10 +   2543920 aT-T-AA--GT----A---------------A----t
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_israelita.k141_747660                           99610 10 +    146308 AT-T-AA--AC----A---------------G----T
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          31418 10 -     50570 AT-T-AA--AC----A---------------G----T
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18431719 10 -  18827391 AT-T-AA--AT----A---------------G----T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18225 10 -     50209 AT-T-AA--AT----A---------------G----T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425224 10 + 135778131 at-t-aa--at----a---------------g----t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1913725 10 +   2368649 AT-T-AA--AT----A---------------G----T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199951974 10 + 200372422 AT-T-AA--AT----A---------------G----T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40250 10 +     84244 AT-T-AA--AT----A---------------G----T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549300  7 -  53390261 -----AT--GT----A---------------T----T
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1765 14 +     23735 AT-T-AC--AT----A---------------TTGATT
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 51825 12 +     63868 AT-T-ACTAGT----A---------------A----C
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29764  9 -     87169 AT-T-AC--AT----A---------------T-----
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    838320 10 +   1526836 TA-T-AA--AT----A---------------T----C
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37079 10 +     51376 AT-T-AA--GT----A---------------A----T
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16812681  9 +  35494412 at-t-ac--ac----a---------------t-----
i Delphinapterus_leucas.KZ290073.1                       C 0 I 3
s Desmodus_rotundus.KZ672289.1                             8631391 10 +  20541912 at-t-ac--at----a---------------t----t
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37621 10 +     67921 AG-T-AA--GT----A---------------A----T
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       312169  8 +    607251 ---t-at--ac----a---------------t----t
i Elaphurus_davidianus.JRFZ01104969.1                    I 1 C 0
s Ellobius_lutescens.LOEQ01008920.1                          22341 10 -    110024 at-t-attagt----c---------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 5
s Ellobius_talpinus.LOJH01081419.1                            2247 12 +      8657 Ac-t-attagt----c---------------t----c
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16330920  8 -  41312741 ac-t-ta--ac----a---------------------
i Enhydra_lutris.KZ291758.1                              I 8 I 7
s Eptesicus_fuscus.JH977646.1                              2146984 10 -  14770903 ct-t-ac--aC----A---------------T----T
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Erythrocebus_patas.Contig38                             21208392 10 -  21539334 AT-T-AA--AT----A---------------G----T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12348 10 +    133382 AT-T-AC--AC----A---------------T----T
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             26301 10 -     44125 AT-T-AC--AC----A---------------T----T
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20238226  9 + 206538554 at-t-ac--ag----a---------------t-----
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20197069  9 + 205367284 at-t-ac--AG----A---------------T-----
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 10823  9 -     36744 AT-T-AC--AG----A---------------T-----
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             851642 10 +   3816255 AT-T-AG--CT----A---------------T----T
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               2739 10 -      9135 AT-T-AA--AT----A---------------A----T
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     610131 10 -    660261 at-t-at--ac----a---------------t----t
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Gorilla_beringei.k141_3596273                              19226 10 -     32273 AT-T-AA--AT----A---------------G----T
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341362 10 + 186649187 at-t-aa--at----a---------------g----t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33866 11 +     78134 ATTT-TA--TT----A---------------A----A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243601  9 +    327341 AT-T-AC--AT----A---------------T-----
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 19344 10 +     36099 AT-T-AT--AC----A---------------T----T
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20663426 10 +  22651954 AT-T-AA--GT----A---------------A----T
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       111800 14 +   1711038 at-t-aC--AT----A---------------TTGATA
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188                370 14 +      9903 AT-T-AC--AT----A---------------ATGATA
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 C 0
s Hoolock_leuconedys.ctg274                                    438026 10 +    630532 AT-T-AA--AT----A---------------G----T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46305  9 +     55795 AT-T-AC--AT----A---------------T-----
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 4
s Hystrix_cristata.HysCri_scaffold_5660                      84315 10 +    135385 AT-T-AA--AT----A---------------A----T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7522212 10 -   7955117 at-t-ta--ct----a---------------a----a
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               23887  9 +     23964 AT-T-AC--AC----A---------------T-----
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 I 3
s Kogia_breviceps.KogBre_flattened_line_192630                3262  9 -      3359 AT-T-AC--AC----A---------------T-----
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 I 3
s Lagothrix_lagothricha.k141_1005387                         15670 10 -     38430 AT-T-AA--AC----A---------------G----T
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    17638  9 -     42476 CT-T-AC--AC----T---------------C-----
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 35
s Leptonychotes_weddellii.KB714746.1                       3044373  8 +   3914936 ac-t-ta--ac----g---------------------
i Leptonychotes_weddellii.KB714746.1                     I 8 I 7
s Lepus_americanus.LepAme_scaffold_107385                     7997 25 -     14121 AT-A-AT--AT----ATAATTTTATTAAACAG----T
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 2
s Lipotes_vexillifer.KE559953.1                             268951  9 -    662738 at-t-ac--ac----a---------------t-----
i Lipotes_vexillifer.KE559953.1                          C 0 I 3
s Lophocebus_aterrimus.ctg367                              1440358 10 +   1826925 AT-T-AA--AT----A---------------G----T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17957920  8 -  59628241 cc-t-aa--ac----a---------------------
i Lycaon_pictus.CM007581.1                               I 8 I 7
s Macaca_arctoides.k141_2326796                              10168 10 +     40492 AT-T-AA--AT----A---------------G----T
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679422 10 +  60120075 AT-T-AA--AT----A---------------G----T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 15939 10 -     26193 AT-T-AA--AT----A---------------G----T
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            83715 10 -    114318 AT-T-AA--AT----A---------------G----T
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9406 10 -     23192 AT-T-AA--AT----A---------------G----T
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                18870 10 -     29190 AT-T-AA--AT----A---------------G----T
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27448 10 +     37952 AT-T-AA--AT----A---------------G----T
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842527 10 + 187317192 at-t-aa--at----a---------------g----t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461103 10 -  25927173 at-t-aa--at----a---------------g----t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83304 10 +     89720 AT-T-AA--AT----A---------------G----T
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10297 10 +     20474 AT-T-AA--AT----A---------------G----T
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10094 10 -     14993 AT-T-AA--AT----A---------------G----T
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  332956 10 -    668171 AT-T-AA--AT----A---------------G----T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8406 10 -     24072 at-t-aa--at----a---------------g----t
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29037 10 -     45290 AT-T-AA--AT----A---------------G----T
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91929 10 +     94391 AT-T-AT--AT----A---------------T----C
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23940625 10 -  24302211 AT-T-AA--AT----A---------------G----T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354741 10 +    752769 AT-T-AA--AT----A---------------G----T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33104499 10 -  40650429 at-t-ta--ct----a---------------a----a
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        14618 13 -    207569 AT-C-AC--AT----A---------------T-GATT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             11632  8 +     13704 ac-t-ta--ac----a---------------------
i Mellivora_capensis.MelCap_flattened_line_69365         I 8 I 7
s Meriones_unguiculatus.MerUng_scaffold_7390                 34575 12 +    140813 AT-T-ACTAGT----A---------------A----C
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12184046 12 -  29670104 AT-T-ACTAGT----A---------------A----C
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    4557 13 +     10310 AT-T-AC--ACGTTGA---------------T-----
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 I 3
s Micronycteris_hirsuta.MicHir_scaffold_52381                17132 10 -     19307 AT-T-AC--AT----A---------------T----T
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 2
s Microtus_ochrogaster.CM001695.1                         11262323 12 -  27267610 ac-t-attagt----c---------------a----c
i Microtus_ochrogaster.CM001695.1                        C 0 I 1
s Miniopterus_natalensis.LDJU01000034.1                    1851545  9 +   8254450 -T-T-AC--AT----A---------------T----T
i Miniopterus_natalensis.LDJU01000034.1                  I 4 I 3
s Miniopterus_schreibersii.MinSch_scaffold_18080             35225  9 +     64694 -T-T-AC--AT----A---------------T----T
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 4 I 3
s Miopithecus_ogouensis.k141_534055                          12301 10 -     28506 AT-T-AA--AT----A---------------G----T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         7241  8 -      8324 ac-t-ta--ac----a---------------------
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 8 I 7
s Monodon_monoceros.MonMon_M_scaffold_103                    28064  9 -    437263 AT-T-AC--AC----A---------------T-----
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 3
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142937 10 -    366855 AT-T-AC--AT----A---------------T----T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   2195 10 +     82753 AT-T-AT--AC----A---------------T----T
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           8081 10 +     14753 CT-T-AC--AT----A---------------T----T
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84362956  3 - 120012414 at-t---------------------------------
i Mus_caroli.LT608237.1                                  C 0 I 7
s Mus_musculus.chr8                                       87652455  3 - 129401213 AT-T---------------------------------
i Mus_musculus.chr8                                      C 0 I 9
s Mus_pahari.LT608297.1                                   31357189 12 -  89631738 at-t-ATGAGT----A---------------A----C
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mustela_putorius.JH418006.1                               303026  3 -  14710649 ---------ac----a---------------------
i Mustela_putorius.JH418006.1                            I 7 I 7
s Mus_spretus.CM004101.1                                  90754946  3 - 130317789 at-t---------------------------------
i Mus_spretus.CM004101.1                                 C 0 I 7
s Myocastor_coypus.MyoCoy_scaffold_10123                     72389 10 -     80779 GT-T-AA--AT----A---------------G----T
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                279978 10 -  10118263 ct-t-ac--at----a---------------t----t
i Myotis_brandtii.KE162005.1                             T 1743 C 0
s Myotis_davidii.KB100139.1                                1588975 10 -   6019432 ct-t-ac--at----a---------------t----t
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3905075 10 -   4330536 ct-t-ac--at----a---------------t----t
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                        1227 10 +      1835 CT-T-AC--AT----A---------------T----T
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 C 0
s Nannospalax_galili.KL204047.1                            2036758  9 -   3037898 -----ACTAAT----A---------------A----C
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               18357 10 +     21681 AT-T-AA--AT----A---------------G----T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308834  8 +  31847680 ac-t-ta--ac----a---------------------
i Neomonachus_schauinslandi.NINY01007730.1               I 8 I 7
s Neophocaena_asiaeorientalis.KZ687982.1                   5867033  9 +   7148211 at-t-ac--ac----a---------------t-----
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 3
s Noctilio_leporinus.NocLep_scaffold_251                    759142 10 +    783361 AT-T-AT--AT----A---------------T----T
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 1
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150717  7 -   9404916 -t-t-ac--aC----A---------------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 2 I 7
s Ochotona_princeps.JH802162.1                             1365440 10 +   3988456 at-a-at--at----g---------------g----T
i Ochotona_princeps.JH802162.1                           C 0 I 8
s Odobenus_rosmarus.KB229312.1                              507976  8 -   2017862 at-t-ta--ac----a---------------------
i Odobenus_rosmarus.KB229312.1                           I 8 I 7
s Odocoileus_virginianus.KZ100018.1                         145839  8 +    630418 ---t-tt--ac----a---------------t----a
i Odocoileus_virginianus.KZ100018.1                      I 1 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          78042 10 -    150152 at-t-at--gc----a---------------t----t
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   26962 12 +     28053 AC-T-ATTAGT----C---------------A----C
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    81974 12 +    102263 AT-T-ACTAGT----A---------------A----C
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2782944  9 -  10937097 at-t-ac--ac----a---------------t-----
i Orcinus_orca.KB316932.1                                C 0 I 3
s Oryctolagus_cuniculus.CM000791.1                        67148898 25 + 174332312 at-a-at--at----atcattttattaaaCAG----T
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 2
s Otocyon_megalotis.JAEUCK010005147.1                       463666  7 -    559221 -t-t-ac--ac----A---------------------
i Otocyon_megalotis.JAEUCK010005147.1                    I 2 I 1618
s Ovis_aries.CM001607.2                                   17587317 10 +  44047080 at-t-at--ac----a---------------t----t
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      175302 10 -    191736 AT-T-AT--AC----A---------------T----T
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    47327 10 +     80009 at-t-aa--at----a---------------g----t
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146197 10 + 189151597 at-t-aa--at----a---------------g----t
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152431  9 +    230217 AT-T-AC--AG----A---------------T-----
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                265640  9 +  18783137 at-t-ac--ag----a---------------t-----
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4722520  9 -   8748460 at-t-ac--AG----A---------------T-----
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1266207 10 -   2937107 at-t-at--ac----a---------------t----t
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183446431 10 + 183742232 at-t-aa--at----a---------------g----t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10081 10 +     20448 AT-T-AA--AT----A---------------G----T
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20566889 10 +  20919399 AT-T-AA--AT----A---------------G----T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   8821 10 +     41871 AT-T-AA--AT----A---------------G----T
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12114 10 +     27711 AT-T-AA--AT----A---------------G----T
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3113 10 -     11374 AT-T-AA--AT----A---------------G----T
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13922  9 -     78924 AT-T-GT--AT----A---------------T-----
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18196601 12 -  18517816 AT-T-ACTGGT----A---------------A----C
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     29360  3 -     29689 AT-T---------------------------------
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 I 3
s Phocoena_phocoena.PhoPho_flattened_line_24159               9987  9 +     63832 AT-T-AC--AC----A---------------T-----
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 3
s Piliocolobus_badius.k141_1142974                            1429 10 +     68526 AT-T-AA--AT----A---------------G----T
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        41575 10 +     89929 AT-T-AA--AT----A---------------G----T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            42989 10 +     51399 AT-T-AA--AT----A---------------G----T
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299226 10 -  14605196 AT-T-AA--AT----A---------------G----T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3007 10 +     22620 AT-T-AT--AC----A---------------T----T
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pithecia_albicans.k141_1476471                              4872 10 +     26961 AT-T-AA--AC----A---------------G----T
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1017 10 +     23417 AT-T-AA--AC----A---------------G----T
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                4864 10 +     29694 AT-T-AA--AC----A---------------G----T
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          29890 10 +     52772 AT-T-AA--AC----A---------------G----T
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           4886 10 +     26198 AT-T-AA--AC----A---------------G----T
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3941434 10 +   4542175 AT-T-AA--AC----A---------------G----T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            4850 10 -     23490 AT-T-AA--AC----A---------------G----T
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9106 10 -     39866 AT-T-AA--AC----A---------------G----T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18272 10 +     34906 AT-T-AA--AC----A---------------G----T
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       22536 10 +     87950 AT-T-AA--AC----A---------------G----T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23363 10 +     88961 AT-T-AA--AC----A---------------G----T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9034 10 +     39403 AT-T-AA--AC----A---------------G----T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          22815 10 -     87928 AT-T-AA--AC----A---------------G----T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         29774 10 +     60166 AT-T-AA--AC----A---------------G----T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      29971 10 +     67232 AT-T-AA--AC----A---------------G----T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          25444 10 +     90634 AT-T-AA--AC----A---------------G----T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          22816 10 -     89403 AT-T-AA--AC----A---------------G----T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189134343 10 + 189387572 at-t-aa--at----g---------------g----t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9573952 10 +   9816681 AT-T-AA--AT----G---------------G----T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76541 10 -     81375 AT-T-AA--AT----A---------------G----T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8358 10 +     19060 AT-T-AA--AT----A---------------G----T
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            12216 12 -     21651 AT-T-ACTAGT----A---------------A----C
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            16425 11 -     21811 at-t-ac--at----a--------------gt----t
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41834  8 +     42204 AC-T-TA--AC----A---------------------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 8 I 7
s Pteropus_alecto.KB030862.1                              22978026  5 +  28871421 ---------NN----N---------------N----N
i Pteropus_alecto.KB030862.1                             I 3 I 3
s Puma_concolor.QAVW01001104.1                            20275590  9 -  38429054 at-t-at--ag----a---------------t-----
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             18343 10 -     91421 AT-T-AA--AT----A---------------G----T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612466 10 +   7812017 AT-T-AA--AT----A---------------G----T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18373 10 -     72585 AT-T-AA--AT----A---------------G----T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6789  8 +     55207 ---TTAT--AC----A---------------T-----
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 1 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        368262 14 -   3329780 at-t-ac--at----a---------------CGGATa
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                            10041 10 -     11128 AT-T-AA--AT----A---------------G----T
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239409 10 - 195417433 AT-T-AA--AT----A---------------G----T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675056 10 +   7961872 AT-T-AA--AT----A---------------G----T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89114  5 -     96226 ---------AT----A---------------T----T
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 3 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154447 10 -    313613 AT-T-AT--GT----A---------------T----T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                         3215 10 -     12572 AT-T-AA--AT----A---------------G----T
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30067 10 +     39453 AT-T-AA--AT----A---------------G----T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           10575 10 +     27826 AT-T-AA--AT----A---------------G----T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10111 10 -     19483 AT-T-AA--AT----A---------------G----T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3414 10 -     12762 AT-T-AA--AT----A---------------G----T
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3263  6 +     13763 ------A--AT----A---------------G----T
i Semnopithecus_vetulus.k141_910252                      I 1 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     2126 11 -     30804 AT-T-A-TATT----A---------------G----C
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Sorex_araneus.JH798187.1                                13652265 10 -  18376816 AT-T-AT--AT----T---------------C----C
i Sorex_araneus.JH798187.1                               I 17 C 0
s Spermophilus_dauricus.KZ294078.1                         1955358 10 -   3870691 at-t-ta--ct----a---------------a----a
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             32310  8 +     97271 ac-t-ta--ac----a---------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 8 I 6
s Suricata_suricatta.SurSur_flattened_line_6629              19601  9 -    196729 AT-C-AC--AT----A---------------T-----
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6812408 12 +  69701581 at-t-AT--AT-T-GA---------------T----T
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                12098 10 +     41958 CT-T-AT--AT----A---------------T----T
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Theropithecus_gelada.CM009954.1                        186431737 10 + 186847797 at-t-aa--at----a---------------g----t
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106662  3 +    114563 AT-T---------------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     82483 10 +    610378 AT-T-AC--AT----A---------------T----G
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 4
s Trachypithecus_auratus.k141_722599                         14160 10 -     20410 AT-T-AA--AT----A---------------G----T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3276 10 -     12674 AT-T-AA--AT----A---------------G----T
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14268 10 +     19930 AT-T-AA--AT----A---------------G----T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      10663 10 -     19997 AT-T-AA--AT----A---------------G----T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            50810 10 -     60166 AT-T-AA--AT----A---------------G----T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18271 10 -     27529 AT-T-AA--AT----A---------------G----T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                          7  2 +      9229 -------------------------------A----T
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          11910  2 -     21137 -------------------------------a----t
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                   10633 10 -     10723 AT-T-AA--AT----A---------------G----T
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         9810 10 +      9834 AT-T-AA--AT----A---------------G----T
i Trachypithecus_melamera.k141_434728                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28133 10 +     32220 AT-T-AA--AT----A---------------G----T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942230 10 +   6242583 AT-T-AA--AT----A---------------G----T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11483 10 +     20839 AT-T-AA--AT----A---------------G----T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    1101 10 +     27266 AT-T-AC--AC----A---------------T----T
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15739186  9 +  33153633 at-t-ac--ac----a---------------t-----
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 17
s Uropsilus_gracilis.UroGra_scaffold_12083                   54548 10 -     77625 AT-T-AT--AT----A---------------C----T
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4851694  8 -   5085361 ac-t-ta--ac----a---------------------
i Ursus_maritimus.KK499267.1                             I 8 I 7
s Vicugna_pacos.KN270157.1                                 5373059 10 -   5488506 at-t-ac--at----a---------------t----t
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 12109  7 -     43706 -T-T-AC--AC----A---------------------
i Vulpes_lagopus.VulLag_flattened_line_30954             I 2 I 7
s Xerus_inauris.XerIna_scaffold_2302                          2361 10 +    224448 AT-T-TA--CT----A---------------A----A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      16112  0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Tupaia_chinensis.KB320699.1                              2157208  1 +   4065304 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   7643  0 +      8208 C
e Tarsius_wallacei.k141_254427                                1877  3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080  3 +     70052 I
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73921  0 +    116680 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Rattus_norvegicus.chr16                                 53571770 803 +  90668790 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190536  0 +    196477 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Manis_pentadactyla.KN006162.1                              51539 28 -    317179 I
e Manis_javanica.JSZB01003497.1                              19521 28 +    737560 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Jaculus_jaculus.JH725527.1                               8278370  0 -   9596543 C
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Glis_glis.GliGli_scaffold_19807                            32178  0 +     49224 C
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64769  0 +   2246927 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Crocidura_indochinensis.CroInd_scaffold_37019               4143  0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1750  0 -      8501 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Cephalopachus_bancanus.k141_1423433                         6085  3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Carlito_syrichta.NW_007259797.1                           156587  3 -    496798 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Allactaga_bullata.AllBul_scaffold_9566                     75669  0 -     89534 C

a score=0.000000
s hg38.chrUn_KI270753v1                                       9994 19 +     62944 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
s Acinonyx_jubatus.LLWD01001279.1                           828592 10 -   1699592 -----------------------t----a-----t----gactaat------------------------------------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 2
s Acomys_cahirinus.AcoCah_scaffold_12655                     72571 29 +     87051 -A----CC---------------T----ATACA-T----AATTAAT--GTATA----TCTAA-C-------A----------
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 1
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511906  8 -  29979442 --------------------------------------------tt---a-ga----a-----t-------a----------
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 7 C 0
s Ailurus_fulgens.LNAC01001112.1                             80986  8 -    347723 --------------------------------------------tt---a-ga----a-----t-------a----------
i Ailurus_fulgens.LNAC01001112.1                         I 7 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     75669  4 -     89534 ---------------------------------------------------------A-----T-------G---------T
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   17865 19 -     52922 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         17796 19 -     28001 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8291 19 -     18505 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9144 19 -     12518 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              9610 19 +     51355 AA----T----------------T----G-----T----TTATAAT-----TA----A-----T-------A---------T
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                2715 19 -     36483 AA----T----------------T----G-----T----TTATAAT-----TA----A-----T-------A---------T
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13172 19 +     28687 AA----T----------------T----G-----T----TTATAAT-----TA----G-----T-------A---------T
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 1640 19 +     27940 AA----T----------------T----G-----T----TTATAAT-----TA----A-----T-------A---------T
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            2722 19 -      9457 AA----T----------------T----G-----T----TTATAAT-----TA----A-----T-------A---------T
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             1680 19 +     30492 AA----T----------------T----G-----T----TTATAAT-----TA----A-----T-------A---------T
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              5675 19 +     47717 AA----T----------------T----G-----T----TTATAAT-----TA----A-----T-------A---------T
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              2407 19 +      5663 AA----T----------------T----G-----T----TTATAAT-----TA----A-----T-------A---------T
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             16859 19 +     50774 AA----T----------------T----G-----T----TTATAAT-----TA----A-----T-------A---------T
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          677027 18 -   2318259 gt----t----------------t----a-----t----a----at---a-tatgatg-----t------------------
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      186647 24 +    412891 AA----T-TAT--T---------T----G-----T----ATTTAATA----CA----A-----C-------A---------T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 8
s Antilocapra_americana.AntAmePen_scaffold_12469             99507 23 -    100397 GT----T----------------T----A-----T----AATGAATA----TATGATA-----T-------A----------
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13907 14 +     20879 -T----A--AT--TAT------GT----A-----C----AAT----------------------------------------
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 4
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6053 24 +     43469 GA----T-TAT--T---------T----A-----T----ATTTAATA----TA----A-----C-------A---------G
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 8
s Ateles_geoffroyi_b.tarseq_1536                             21209874 19 -  21539123 AA----T----------------T----A-----t----ttataat-----ta----a-----t-------a---------t
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               44670 19 -     48001 AA----T----------------T----A-----t----ttataat-----ta----a-----t-------a---------t
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 27474 19 -     30947 AA----T----------------T----A-----t----ttataat-----ta----a-----t-------a---------t
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9246 19 -     89868 AA----T----------------T----A-----t----ttataat-----ta----a-----t-------a---------t
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              13630 19 -     40414 AA----T----------------T----A-----t----ttataat-----ta----a-----t-------a---------t
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                21519 19 +     72325 AA----T----------------T----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193046 33 +  23207421 tattgtt----------------t----a-----t----aattaat---a-ta----a-----t-------acataatgcat
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         3511 33 -     18090 GAttgtt----------------t----a-----t----aattaat---a-ta----a-----t-------acataatgcat
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    28110 22 +     34529 GT----T----------------T----A-----TAATTA----ATA----TATGATG-----T------------------
i Beatragus_hunteri.BeaHun_scaffold_50177                I 176 C 0
s Bison_bison.KN261452.1                                    201041 22 -    288883 GT----T----------------T----A-----T----AATTAATA----TACTATG-----T------------------
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20274226 18 +  48749331 gt----t----------------t----a-----t----a----at---a-tactatg-----t------------------
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1126786 22 -   1948126 GT----T----------------T----A-----T----AATTAATA----TACTATG-----T------------------
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18084864 18 +  45695690 gt----t----------------t----a-----t----a----at---a-tactatg-----t------------------
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2820540 22 +   4408762 GT----T----------------T----A-----T----AATTAATA----TACTATG-----T------------------
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                102491 19 -    122966 AA----T----------------T----G-----T----TTATAAT-----TA----A-----T-------A---------T
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   61996 19 +     81800 AA----T----------------T----G-----T----TTATAAT-----TA----A-----T-------A---------T
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31176 19 -     95584 AA----T----------------T----G-----T----TTATAAT-----TA----A-----T-------A---------T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55277 19 -    119600 AA----T----------------T----G-----T----TTATAAT-----TA----A-----T-------A---------T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10003550 19 -  17673402 gt----t----------------t----a-----t----a-ttaat---a-ta----a-----t-------g---------t
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2336026 19 -   7040546 gt----t----------------t----a-----t----a-ttaat---a-ta----a-----t-------g---------t
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  404325 19 -   1652518 gt----t----------------t----a-----t----a-ttaat---a-ta----a-----t-------g---------t
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17801783  8 -  60362399 --------------------------------------------at---a-ga----a-----t-------a----------
i CanFam4.chr16                                          I 7 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     2524  8 -     43241 --------------------------------------------at---a-ga----a-----t-------a----------
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 7 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9037226  8 -   9314153 --------------------------------------------at---a-ga----a-----t-------a----------
i Canis_lupus_dingo.QKWQ01000480.1                       I 7 C 0
s Canis_lupus_familiaris.chr16                            17961695  8 -  59632846 --------------------------------------------at---a-ga----a-----t-------a----------
i Canis_lupus_familiaris.chr16                           I 7 C 0
s Canis_lupus_orion.HG994398.1                            18502997  8 +  63665305 --------------------------------------------at---a-ga----a-----t-------a----------
i Canis_lupus_orion.HG994398.1                           I 7 C 0
s Capra_aegagrus.CM003241.1                               18831141 18 +  46296322 GT----T----------------T----A-----T----A----ATA----TATGATG-----T------------------
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18061861 18 -  44709034 GT----T----------------T----A-----T----A----ATA----TATGATG-----T------------------
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    2217 20 -     12242 -A----T-T--------------T----A-----T----GATTAAAA----TA----A-----T-------G---------A
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6393 24 -     11696 GA----T-TAT--T---------T----A-----T----ATTTAATA----TA----A-----C-------A---------T
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 10
s Castor_canadensis.CasCan_scaffold_2074                    138566  7 +    179628 -----------------------T----T-----T----TATT---------------------------------------
i Castor_canadensis.CasCan_scaffold_2074                 I 1 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     94851 27 +    217609 GT----T----------------T----A-----T----AATTAATA----TA----A-----TGCAATGTA---------T
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cercocebus_atys.KQ010504.1                               4478826 18 +   4669795 aa----t----------------c----a-----t----ttataat-----tt----a-----t-------a----------
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3320 18 +     17872 AA----T----------------C----A-----T----TTATAAT-----TT----A-----T-------A----------
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           3915 18 -     14043 AA----T----------------C----A-----T----TTATAAT-----TT----A-----T-------A----------
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12010 18 +     27781 AA----T----------------C----A-----T----TTATAAT-----TT----A-----T-------A----------
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12156 19 -     20310 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15136 19 +     29689 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            9892 19 -     20078 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          17807 19 -     27936 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            6676 19 -     17152 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826406 19 +  39242232 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21225910 19 -  21565898 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43029 19 -     53127 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3279 19 +     13442 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       17825 19 -     27947 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                          854 19 +     10558 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          3859 19 +     14005 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1099 19 -     17098 AA----T----------------T----G-----T----TTATAAT-----TA----A-----T-------A---------T
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                               975 19 +     17877 AA----T----------------T----G-----T----TTATAAT-----TA----A-----T-------A---------T
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            158542 19 -    216457 AA----T----------------T----G-----T----TTATAAT-----TA----A-----T-------A---------T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63017 19 +     76511 AA----T----------------T----G-----T----TTATAAT-----TA----A-----T-------A---------T
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254136 20 +   2543920 -a----c---------------tt----a-----t----tatttaa---a-ta----a-----t-------a---------t
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_israelita.k141_747660                           99620 19 +    146308 AT----T----------------T----G-----T----TTATAAT-----TA----A-----T-------A---------T
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          31428 19 -     50570 AT----T----------------T----G-----t----ttataat-----ta----a-----t-------a---------t
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18431729 19 -  18827391 AA----T----------------C----G-----T----TTATAAT-----TA----A-----T-------A---------T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18235 19 -     50209 AA----T----------------C----G-----T----TTATAAT-----TA----A-----T-------C---------T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425234 19 + 135778131 aa----t----------------c----g-----t----ttataat-----ta----a-----t-------a---------t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1913735 19 +   2368649 AA----T----------------C----g-----t----ttataat-----ta----a-----t-------a---------t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199951984 19 + 200372422 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40260 19 +     84244 AA----T----------------C----G-----T----TTATAAT-----TA----A-----T-------A---------T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549307 20 -  53390261 GA----G----------------T----A-----T----AATTAATA----GA----A-----t-------g---------c
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1779 20 +     23735 GT----T----------------C----A-----T----AATTAATA----TA----A-----T-------G---------T
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 51837 26 +     63868 -A----CC---------------T----A-----T----AATTAAT--GTATA----TCTAA-C-------A---------T
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29773 19 -     87169 -----------------------TATTTA-----T----GATTAATA----TA----A-----C------------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    838330 21 +   1526836 -A----G-T--------------T----A--C--T----TATTAAAA----TA----A-----T-------A---------T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37089 20 +     51376 -A----T-T--------------T----A-----T----GATTAAAA----CA----A-----T-------G---------A
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16812693 27 +  35494412 ------t----------------t----a-----t----aattaat---a-ta----a-----t-------acataatgcat
i Delphinapterus_leucas.KZ290073.1                       I 3 C 0
s Desmodus_rotundus.KZ672289.1                             8631401 18 +  20541912 ga----t----------------t----a-----t----atttaat---a-ta----a-----c------------------
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37631 20 +     67921 -A----T-T--------------T----A-----T----TATTTAAA----CA----A-----T-------A---------T
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       312177 24 +    607251 gt----t----------------t----a-----t----cattaat---a-tatgata-----t-------a---------t
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          22356 15 -    110024 -----------------------t----a-----t----a--------ta-ta----taaaa-c-------a----------
i Ellobius_lutescens.LOEQ01008920.1                      I 5 C 0
s Ellobius_talpinus.LOJH01081419.1                            2259 31 +      8657 -t----c---tctctcacacccac----a-----t----a--------ta-ta----taaaa-c-------a---------t
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16330935  8 -  41312741 --------------------------------------------tt---a-ga----a-----t-------a----------
i Enhydra_lutris.KZ291758.1                              I 7 C 0
s Eptesicus_fuscus.JH977646.1                              2146994 27 -  14770903 GA----t------------tgttt----a-----t----aattaat---a-ta----atatt-t-------a----------
i Eptesicus_fuscus.JH977646.1                            C 0 I 15
s Erythrocebus_patas.Contig38                             21208402 19 -  21539334 AA----T----------------C----G-----T----TTATAAT-----TA----A-----T-------A---------T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12358 33 +    133382 GATTGTT----------------T----A-----T----AATTAATA----TA----A-----T-------ACATAATGCAT
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             26311 33 -     44125 GATTGTT----------------T----A-----T----AATTAATA----TA----A-----T-------ACATAATGCAT
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20238235 10 + 206538554 -----------------------t----a-----t----gactaat------------------------------------
i Felis_catus.CM001381.2                                 C 0 I 2
s Felis_catus_fca126.CM031415.1                           20197078 10 + 205367284 -----------------------T----A-----T----gactaat------------------------------------
i Felis_catus_fca126.CM031415.1                          C 0 I 2
s Felis_nigripes.FelNig_flattened_line_20823                 10832 10 -     36744 -----------------------T----A-----T----GACTAAT------------------------------------
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 2
s Fukomys_damarensis.KN121974.1                             851652 20 +   3816255 -A----t---------------ct----a-----t----aattaaa---a-ca----a-----t-------a---------t
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               2749 20 -      9135 TA----T----------------T----A-----T----AATTAATA----TG----A-----A-------A---------T
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     610141 19 -    660261 gt----t----------------t----a-----t----aattaat---a-t-----a-----t-------a---------t
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            32178 12 +     49224 -----------------------------------------TGAATA----TA----A-----T-------A---------T
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              19236 19 -     32273 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341372 19 + 186649187 aa----t----------------c----a-----t----ttataat-----ta----a-----t-------a---------t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33877 20 +     78134 -T----AC---------------T----A-----T----AATGAATA----TA----A-----T-------A---------T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243610 19 +    327341 -----------------------TATTTA-----T----GATTATTA----TA----A-----C------------------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 2
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 19354 15 +     36099 GT----T----------------T----A-----T----A----ATA----TA---TG-----T------------------
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20663436 20 +  22651954 -a----t---------------ct----a-----t----aattaaa---a-ta----a-----t-------a---------t
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       111814 20 +   1711038 GT----T----------------T----A-----G----Cattaat---a-ga----a-----t-------a---------t
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188                384 20 +      9903 GT----T----------------T----A-----G----CATTAATA----GA----A-----T-------G---------T
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 C 0
s Hoolock_leuconedys.ctg274                                    438036 19 +    630532 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46318 15 +     55795 ----------------------------------T----GATTAATA----TA----A-----C-------A---------T
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 4 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84325 20 +    135385 -A----T-T--------------T----A-----A----ATTCAAAA----TA----A-----T-------T---------T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7522222 25 -   7955117 -t----a-attA-T--------CT----A-----T----AATTAATA----TA----C-----T-------A---------T
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               23899 27 +     23964 ------T----------------T----A-----T----AATTAATA----TA----A-----T-------ACATAATGCAT
i Inia_geoffrensis.IniGeo_flattened_line_48101           I 3 C 0
s Jaculus_jaculus.JH725527.1                               8278370  4 -   9596543 ---------------------------------------------------------A-----T-------G---------T
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                3274 27 -      3359 ------T----------------T----A-----T----AATTAATA----TA----A-----T-------ATATAATTCAT
i Kogia_breviceps.KogBre_flattened_line_192630           I 3 C 0
s Lagothrix_lagothricha.k141_1005387                         15680 19 -     38430 Aa----t----------------t----a-----t----ttataat-----ta----a-----t-------a---------t
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_50988                    16406 26 +     29960 GA----T-TGT--T---------T----A-----T----AATTAATA----TA----A-TTT-T-------A----------
i Lasiurus_borealis.LasBor_scaffold_50988                I 22 I 72
s Leptonychotes_weddellii.KB714746.1                       3044388  8 +   3914936 --------------------------------------------tt---a-ga----a-----t-------a----------
i Leptonychotes_weddellii.KB714746.1                     I 7 C 0
s Lepus_americanus.LepAme_scaffold_107385                     8024 21 -     14121 TA----T-T--------------T----ACA-ATT--------AATA----GA----A-----T-------A---------C
i Lepus_americanus.LepAme_scaffold_107385                I 2 C 0
s Lipotes_vexillifer.KE559953.1                             268963 27 -    662738 ------t----------------t----a-----t----aattaat---a-ta----a-----t-------acataatgcat
i Lipotes_vexillifer.KE559953.1                          I 3 C 0
s Lophocebus_aterrimus.ctg367                              1440368 18 +   1826925 AA----T----------------C----A-----T----TTATAAT-----TT----A-----T-------A----------
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17957935  8 -  59628241 --------------------------------------------at---a-ga----a-----t-------a----------
i Lycaon_pictus.CM007581.1                               I 7 C 0
s Macaca_arctoides.k141_2326796                              10178 18 +     40492 AA----T----------------C----A-----T----TTATAAT-----TT----A-----T-------A----------
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679432 18 +  60120075 AA----T----------------C----A-----T----TTATAAT-----TT----A-----T-------A----------
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 15949 18 -     26193 AA----T----------------C----A-----T----TTATAAT-----TT----A-----T-------A----------
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            83725 18 -    114318 AA----T----------------C----A-----T----TTATAAT-----TT----A-----T-------A----------
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9416 18 -     23192 AA----T----------------C----A-----T----TTATAAT-----TT----A-----T-------A----------
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                18880 18 -     29190 AA----T----------------C----A-----T----TTATAAT-----TT----A-----T-------A----------
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27458 18 +     37952 AA----T----------------C----A-----T----TTATAAT-----TT----A-----T-------A----------
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842537 18 + 187317192 aa----t----------------c----a-----t----ttataat-----tt----a-----t-------a----------
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461113 18 -  25927173 aa----t----------------c----a-----t----ttataat-----tt----a-----t-------a----------
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83314 18 +     89720 AA----T----------------C----A-----T----TTATAAT-----TT----A-----T-------A----------
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10307 18 +     20474 AA----T----------------C----A-----T----TTATAAT-----TT----A-----T-------A----------
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10104 18 -     14993 AA----T----------------C----A-----T----TTATAAT-----TT----A-----T-------A----------
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  332966 18 -    668171 AA----T----------------C----A-----T----TTATAAT-----TT----A-----T-------A----------
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8416 18 -     24072 aa----t----------------c----a-----t----ttataat-----tt----a-----t-------a----------
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29047 18 -     45290 AA----T----------------C----A-----T----TTATAAT-----TT----A-----T-------A----------
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91939 20 +     94391 AT----T----------------T----A-----T----AATTAAT--G--TA----A-----T-------A---------T
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23940635 18 -  24302211 AA----T----------------C----A-----T----TTATAAT-----TT----A-----T-------A----------
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354751 18 +    752769 AA----T----------------C----A-----T----TTATAAT-----TT----A-----T-------A----------
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33104509 23 -  40650429 -t----a--attaT--------CT----A-----T----ACTTAATA----TA----C-----t------------------
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        14631 20 -    207569 GC----T----------------T----A-----C----AATTAATA----TA----A-----T-------T---------C
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             11647  8 +     13704 --------------------------------------------tt---a-ga----a-----t-------a----------
i Mellivora_capensis.MelCap_flattened_line_69365         I 7 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 34587 30 +    140813 -A----CC---------------T----ATATA-T----AATTAATGC-A-TA----TCTAA-C-------A---------T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12184058  2 -  29670104 -A----C---------------------------------------------------------------------------
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    4573 27 +     10310 ------T----------------T----A-----T----AATTAATA----TA----A-----C-------ACATAATGCAT
i Mesoplodon_bidens.MesBid_scaffold_108144               I 3 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                17144 22 -     19307 ------T-TGT--T---------T----A-----T----ATTTAATA----TA----A-----C-------A---------C
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 2 C 0
s Microtus_ochrogaster.CM001695.1                         11262336 14 -  27267610 ----------------------------------c----a--------ca-ca----tataa-c-------a---------t
i Microtus_ochrogaster.CM001695.1                        I 1 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1851557 13 +   8254450 -----------------------t----a-----t----aattaat---a-ta-----------------------------
i Miniopterus_natalensis.LDJU01000034.1                  I 3 I 13
s Miniopterus_schreibersii.MinSch_scaffold_18080             35237 13 +     64694 -----------------------T----A-----T----AATTAATA----TA-----------------------------
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 3 I 13
s Miopithecus_ogouensis.k141_534055                          12311 19 -     28506 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         7256  8 -      8324 --------------------------------------------tt---a-ga----a-----t-------a----------
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 7 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    28076 27 -    437263 ------T----------------T----A-----T----AATTAATA----TA----A-----T-------ACATAATGCAT
i Monodon_monoceros.MonMon_M_scaffold_103                I 3 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142947 20 -    366855 GA----T----------------C----A-----T----TTATAATA----CA----A-----C-------A---------T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   2205 22 +     82753 GT----T----------------T----A-----T----AATCAATA----TATGATG-----T------------------
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           8091 27 +     14753 GA----T-TGT--T---------T----A-----T----AATTAATA----TA----G-TAttt-------a----------
i Murina_feae.MurFea_scaffold_85699                      C 0 I 12
s Mus_caroli.LT608237.1                                   84362966 30 - 120012414 -A----CC---------------T----ATATA-T----AAGTAAT--GTATA----TGTAA-C-------A---------T
i Mus_caroli.LT608237.1                                  I 7 C 0
s Mus_musculus.chr8                                       87652467 30 - 129401213 -A----CC---------------T----ATATA-T----AAGTAAT--GTATA----TGTAA-C-------A---------T
i Mus_musculus.chr8                                      I 9 C 0
s Mus_pahari.LT608297.1                                   31357201 30 -  89631738 -A----C-T--------------t----atata-t----aagtaat-gta-ta----tctaa-c-------a---------t
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90754956 30 - 130317789 -A----CC---------------T----ATATA-T----AAGTAAT--GTATA----TGTAA-C-------A---------T
i Mus_spretus.CM004101.1                                 I 7 C 0
s Mustela_putorius.JH418006.1                               303036  8 -  14710649 --------------------------------------------tt---a-ga----a-----t-------a----------
i Mustela_putorius.JH418006.1                            I 7 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     72399 20 -     80779 -A----T-T--------------T----C-----T----GATTAAAA----TG----A-----T-------G---------A
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                279988 27 -  10118263 ta----t------------tgttt----a-----t----aattaat---a-ta----atatt-t-------a----------
i Myotis_brandtii.KE162005.1                             C 0 I 1754
s Myotis_davidii.KB100139.1                                1588985 27 -   6019432 ta----t------------tgttt----a-----t----aattaat---a-ta----atatt-t-------a----------
i Myotis_davidii.KB100139.1                              C 0 I 11
s Myotis_lucifugus.GL429869.1                              3905085 27 -   4330536 ta----t------------tgttt----a-----t----aattaat---a-ta----atatt-t-------a----------
i Myotis_lucifugus.GL429869.1                            C 0 I 11
s Myotis_myotis.MyoMyo_scaffold_281845                        1237 27 +      1835 TA----T-TGT--T---------T----A-----T----AATTAATA----TA----A-TATTT-------A----------
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 I 11
s Nannospalax_galili.KL204047.1                            2036767 22 -   3037898 -A----T-T--------------T----A-----T----AATTAAT--GTACA----T-----A-------A---------T
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               18367 19 +     21681 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308849  8 +  31847680 --------------------------------------------tt---a-ga----a-----t-------a----------
i Neomonachus_schauinslandi.NINY01007730.1               I 7 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5867045 27 +   7148211 ------t----------------t----a-----t----aattaat---a-ta----a-----t-------acataatgcat
i Neophocaena_asiaeorientalis.KZ687982.1                 I 3 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    759153 15 +    783361 ----------------------------------T----CATTAACA----TC----A-----T-------A---------T
i Noctilio_leporinus.NocLep_scaffold_251                 I 1 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150731  9 -   9404916 --------------------------------------------ATA----TA----A-----C-------A---------c
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 7 I 2
s Ochotona_princeps.JH802162.1                             1365458 11 +   3988456 ----------------------------------T--------AATA----TA----A-----T-------A---------C
i Ochotona_princeps.JH802162.1                           I 8 C 0
s Odobenus_rosmarus.KB229312.1                              507991  8 -   2017862 --------------------------------------------tt---a-ga----a-----t-------a----------
i Odobenus_rosmarus.KB229312.1                           I 7 C 0
s Odocoileus_virginianus.KZ100018.1                         145847  5 +    630418 ga----t----------------t----a-----------------------------------------------------
i Odocoileus_virginianus.KZ100018.1                      C 0 I 291
s Okapia_johnstoni.LVCL01S0005463.1                          78052 24 -    150152 gt----t----------------t----a-----t----aattaat---a-tatgata-----t-------a---------t
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   26974 34 +     28053 -C----CCTATACTATATATATGT----A-----T----A---------TATA----TACAA-T-------A---------T
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    81986 24 +    102263 -A----CC---------------T----A-----T----AATTTA----TAAA----TCTAA-C-------A---------T
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2782956 27 -  10937097 ------t----------------t----a-----t----aattaat---a-ta----a-----t-------acataatgcat
i Orcinus_orca.KB316932.1                                I 3 C 0
s Oryctolagus_cuniculus.CM000791.1                        67148925 21 + 174332312 TA----T-T--------------T----ACA-ATT--------AATA----GA----A-----T-------A---------C
i Oryctolagus_cuniculus.CM000791.1                       I 2 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       465291  8 -    559221 --------------------------------------------at---a-ga----a-----t-------a----------
i Otocyon_megalotis.JAEUCK010005147.1                    I 1618 T 1612
s Ovis_aries.CM001607.2                                   17587327 15 +  44047080 gt----t----------------t----a-----t----a----at---a-tat---g-----t------------------
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      175312 18 -    191736 GT----T----------------T----A-----T----A----ATA----TATGATG-----T------------------
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    47337 19 +     80009 aa----t----------------c----a-----t----ttataat-----ta----a-----t-------a---------t
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146207 19 + 189151597 aa----t----------------c----a-----t----ttataat-----ta----a-----t-------a---------t
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152440 10 +    230217 -----------------------T----A-----T----GACTAAT------------------------------------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 2
s Panthera_pardus.KV860321.1                                265649 10 +  18783137 -----------------------t----a-----t----gactaat------------------------------------
i Panthera_pardus.KV860321.1                             C 0 I 2
s Panthera_tigris.KE722367.1                               4722529 10 -   8748460 -----------------------T----A-----T----gactaat------------------------------------
i Panthera_tigris.KE722367.1                             C 0 I 2
s Pantholops_hodgsonii.KE114653.1                          1266217 18 -   2937107 gt----t----------------t----a-----t----a----at---a-tatgatg-----t------------------
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183446441 18 + 183742232 aa----t----------------c----a-----t----ttataat-----tt----a-----t-------a----------
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10091 18 +     20448 AA----T----------------C----A-----T----TTATAAT-----TT----A-----T-------A----------
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20566899 18 +  20919399 AA----T----------------C----A-----T----TTATAAT-----TT----A-----T-------A----------
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   8831 18 +     41871 AA----T----------------C----A-----T----TTATAAT-----TT----A-----T-------A----------
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12124 18 +     27711 AA----T----------------C----A-----T----TTATAAT-----TT----A-----T-------A----------
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3123 18 -     11374 AA----T----------------C----A-----T----TTATAAT-----TT----A-----T-------A----------
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13931 21 -     78924 -----------------------TATTTA-----T----GATTAATA----TA----A-----C-------A---------T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18196613 24 -  18517816 -A----CC---------------t----a-----t----aattta---ta-aa----tcaaa-c-------a---------t
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     29366 20 -     29689 -A----T-T--------------T----A-----C----AATTAAAA----TA----A-----T-------A---------T
i Petromus_typicus.PetTyp_scaffold_42190                 I 3 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               9999 27 +     63832 ------T----------------T----A-----T----AATTAATA----TA----A-----T-------ACATAATGCAT
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 3 C 0
s Piliocolobus_badius.k141_1142974                            1439 19 +     68526 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        41585 19 +     89929 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            42999 19 +     51399 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299236 19 -  14605196 aa----t----------------c----a-----t----ttataat-----ta----a-----t-------a---------t
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3017 27 +     22620 TA----T-TGT--T---------T----A-----T----AATTAATA----TA----A-TATTT-------A----------
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 12
s Pithecia_albicans.k141_1476471                              4882 19 +     26961 AA----T----------------T----G-----T----TTATAAT-----TA----A-----T-------A---------T
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1027 19 +     23417 AA----T----------------T----G-----C----TTATAAT-----TA----A-----T-------A---------T
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                4874 19 +     29694 AA----T----------------T----G-----T----TTATAAT-----TA----A-----T-------A---------T
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          29900 19 +     52772 AA----T----------------T----G-----T----TTATAAT-----TA----A-----T-------A---------T
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           4896 19 +     26198 AA----T----------------T----G-----T----TTATAAT-----TA----A-----T-------A---------T
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3941444 19 +   4542175 AA----T----------------T----G-----T----TTATAAT-----TA----A-----T-------A---------T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            4860 19 -     23490 AA----T----------------T----G-----t----ttataat-----ta----a-----t-------a---------t
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9116 19 -     39866 AA----T----------------T----G-----T----TTATAAT-----TA----A-----T-------A---------T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18282 19 +     34906 AA----T----------------T----G-----T----TTATAAT-----TA----A-----T-------A---------T
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       22546 19 +     87950 AA----T----------------T----G-----T----TTATAAT-----TA----A-----T-------A---------T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23373 19 +     88961 AA----T----------------T----G-----T----TTATAAT-----TA----A-----T-------A---------T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9044 19 +     39403 AA----T----------------T----G-----T----TTATAAT-----TA----A-----T-------A---------T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          22825 19 -     87928 AA----T----------------T----G-----T----TTATAAT-----TA----A-----T-------A---------T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         29784 19 +     60166 AA----T----------------T----G-----T----TTATAAT-----TA----A-----T-------A---------T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      29981 19 +     67232 AA----T----------------T----G-----T----TTATAAT-----TA----A-----T-------A---------T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          25454 19 +     90634 AA----T----------------T----G-----T----TTATAAT-----TA----A-----T-------A---------T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          22826 19 -     89403 AA----T----------------T----G-----T----TTATAAT-----TA----A-----T-------A---------T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189134353 19 + 189387572 aa----t----------------c----a-----t----ttataat-----ta----a-----t-------a---------t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9573962 19 +   9816681 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76551 19 -     81375 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8368 19 +     19060 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            12228 30 -     21651 -A----CC---------------t----atata-t----aattaat-gca-ta----tctaa-c-------a---------t
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            16436 16 -     21811 ta----t----------------a----a-----t----t---aat---g-ta----a-----t-------a----------
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41849  8 +     42204 --------------------------------------------TTA----GA----A-----T-------A----------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 7 C 0
s Pteropus_alecto.KB030862.1                              22978034 15 +  28871421 ----------------------------------N----NNNNNNN---N-NN----N-----N-------N---------N
i Pteropus_alecto.KB030862.1                             I 3 C 0
s Puma_concolor.QAVW01001104.1                            20275599 10 -  38429054 -----------------------t----a-----t----gactaat------------------------------------
i Puma_concolor.QAVW01001104.1                           C 0 I 2
s Pygathrix_cinerea.k141_1153803                             18353 19 -     91421 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612476 19 +   7812017 GA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18383 19 -     72585 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6797 21 +     55207 -----------------------T----A-----T----CATTAATA----TATGATA-----T-------A---------T
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        368276 19 -   3329780 gt----t----------------t----a-----t----aattaat---a-t-----a-----t-------g---------t
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                            10051 19 -     11128 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239419 19 - 195417433 Aa----t----------------c----a-----t----ttataat-----ta----a-----t-------a---------t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675066 19 +   7961872 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89119 20 -     96226 AT----T----------------T----G-----T----AATTAATA----TA----A-----T-------A---------T
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154457 17 -    313613 GA----G----------------T----A-----T----CATTAATA----AA----A------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 1
s Semnopithecus_entellus.k141_1672505                         3225 19 -     12572 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30077 19 +     39453 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           10585 19 +     27826 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10121 19 -     19483 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3424 19 -     12762 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3269 19 +     13763 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     2137 11 -     30804 -A----C-T--------------T----A-----T----AAATT--------------------------------------
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 I 5
s Sorex_araneus.JH798187.1                                13652275 20 -  18376816 AT----G----------------T----A-----A----ACTCAGTACGT-AA----C------------------------
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1955368 25 -   3870691 -t----a-attA-T--------CT----A-----T----AATTAATA----TA----C-----T-------A---------T
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             32324  8 +     97271 --------------------------------------------tt---a-ga----a-----t-------a----------
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 6 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              19610 17 -    196729 -----------------------TATTTA-----T----GATTAATA----TA-----------------------------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6812420 13 +  69701581 GT----T----------------T----A-----T----AATTAAt------------------------------------
i Sus_scrofa.CM000828.4                                  C 0 I 9
s Tadarida_brasiliensis.TadBra_scaffold_25820                12108 21 +     41958 GA----TGT-T--T---------T----A-----T----AATTAATA----TA----A------------------------
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 9
s Theropithecus_gelada.CM009954.1                        186431747 18 + 186847797 aa----t----------------c----a-----t----ttataat-----tt----a-----t-------a----------
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106665 20 +    114563 -G----T-T--------------T----A-----T----AATTAAAA----TA----A-----T-------A---------T
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     82497 16 +    610378 ----------------------------A-----C----ATTTAATA----TG----A-----T-------G---------T
i Tonatia_saurophila.TonSau_scaffold_294                 I 4 C 0
s Trachypithecus_auratus.k141_722599                         14170 19 -     20410 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3286 19 -     12674 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14278 19 +     19930 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      10673 19 -     19997 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            50820 19 -     60166 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18281 19 -     27529 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                          9 18 +      9229 AT----T----------------C----A-----T----TTTTATT-----TT----A-----C-------A----------
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          11912 18 -     21137 at----t----------------c----a-----T----TTTTATT-----TT----A-----C-------A----------
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                   10643 19 -     10723 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_melamera.k141_434728                         9820 14 +      9834 AA----T----------------C----A-----T----TTATAAT-----T------------------------------
i Trachypithecus_melamera.k141_434728                    C 0 N 0
s Trachypithecus_obscurus.k141_190785                        28143 19 +     32220 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942240 19 +   6242583 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11493 19 +     20839 AA----T----------------C----A-----T----TTATAAT-----TA----A-----T-------A---------T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    1111 24 +     27266 GT----T----------------C----A-----T----AATTAAT-C---TATGGTA-----T-------A---------T
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tupaia_chinensis.KB320699.1                              2157209  4 +   4065304 ---------------------------------------------------------a-----a-------a---------t
i Tupaia_chinensis.KB320699.1                            I 1 C 0
s Tursiops_truncatus.MRVK01000835.1                       15739212 13 +  33153633 ---------------------------------------------------------a-----t-------acataatgcat
i Tursiops_truncatus.MRVK01000835.1                      I 17 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54558 16 -     77625 GA----G----------------T----A-----T----AATTAATA----AA-----------------------------
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 3
s Ursus_maritimus.KK499267.1                               4851709  8 -   5085361 --------------------------------------------tt---a-ga----a-----t-------a----------
i Ursus_maritimus.KK499267.1                             I 7 C 0
s Vicugna_pacos.KN270157.1                                 5373069 19 -   5488506 gt----t----------------c----a-----t----a-ttaat---a-ta----a-----t-------g---------t
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 12123  9 -     43706 --------------------------------------------ATA----TA----A-----C-------A---------C
i Vulpes_lagopus.VulLag_flattened_line_30954             I 7 C 0
s Xerus_inauris.XerIna_scaffold_2302                          2371 25 +    224448 -T----A--AT--TAT------GT----A-----T----ATCTAATA----TA----A-----T-------A---------T
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      16112  4 +     63895 ---------------------------------------------------------A-----T-------A---------A
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   7643  0 +      8208 C
e Tarsius_wallacei.k141_254427                                1877  3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080  3 +     70052 I
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73921  0 +    116680 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Rattus_norvegicus.chr16                                 53571770 803 +  90668790 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190536  0 +    196477 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Manis_pentadactyla.KN006162.1                              51539 28 -    317179 I
e Manis_javanica.JSZB01003497.1                              19521 28 +    737560 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64769  0 +   2246927 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Crocidura_indochinensis.CroInd_scaffold_37019               4143  0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1750  0 -      8501 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Cephalopachus_bancanus.k141_1423433                         6085  3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Carlito_syrichta.NW_007259797.1                           156587  3 -    496798 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C

a score=0.000000
s hg38.chrUn_KI270753v1                                      10013  2 +     62944 A-----------C
s Acinonyx_jubatus.LLWD01001279.1                           828604  2 -   1699592 g-----------t
i Acinonyx_jubatus.LLWD01001279.1                        I 2 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     72601  2 +     87051 A-----------T
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 1 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511914  2 -  29979442 g-----------t
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             80994  2 -    347723 g-----------a
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     75673  2 -     89534 A-----------T
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   17884  2 -     52922 A-----------T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         17815  2 -     28001 A-----------T
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8310  2 -     18505 A-----------T
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9163  2 -     12518 A-----------T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              9629  2 +     51355 A-----------T
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                2734  2 -     36483 A-----------T
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13191  2 +     28687 A-----------T
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 1659  2 +     27940 A-----------T
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            2741  2 -      9457 A-----------T
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             1699  2 +     30492 A-----------T
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              5694  2 +     47717 A-----------T
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              2426  2 +      5663 A-----------T
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             16878  2 +     50774 A-----------T
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      186679  1 +    412891 ------------T
i Anoura_caudifer.AnoCau_scaffold_1412                   I 8 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13925  2 +     20879 C-----------T
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 4 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6085  1 +     43469 ------------T
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 8 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21209893  2 -  21539123 a-----------t
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               44689  2 -     48001 a-----------t
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 27493  2 -     30947 a-----------t
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9265  2 -     89868 a-----------t
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              13649  2 -     40414 a-----------t
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                21538  2 +     72325 A-----------T
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193079  2 +  23207421 g-----------t
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         3544  2 -     18090 g-----------t
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Cacajao_ayresi.k141_552049                                102510  2 -    122966 A-----------T
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   62015  2 +     81800 A-----------T
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31195  2 -     95584 A-----------T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55296  2 -    119600 A-----------T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10003569  4 -  17673402 a---------tgt
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2336045  4 -   7040546 a---------tgt
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  404344  4 -   1652518 a---------tgt
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17801791  2 -  60362399 g-----------t
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     2532  2 -     43241 g-----------t
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9037234  2 -   9314153 g-----------t
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17961703  2 -  59632846 g-----------t
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18503005  2 +  63665305 g-----------t
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    2237  2 -     12242 A-----------T
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6427  1 -     11696 ------------T
i Carollia_perspicillata.CarPer_scaffold_92756           I 10 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     94878  2 +    217609 A-----------T
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12175  2 -     20310 A-----------T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15155  2 +     29689 A-----------T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            9911  2 -     20078 A-----------T
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          17826  2 -     27936 A-----------T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            6695  2 -     17152 A-----------T
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826425  2 +  39242232 A-----------T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21225929  2 -  21565898 A-----------T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43048  2 -     53127 A-----------T
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3298  2 +     13442 A-----------T
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       17844  2 -     27947 A-----------T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                          873  2 +     10558 A-----------T
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          3878  2 +     14005 A-----------T
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1118  2 -     17098 A-----------T
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                               994  2 +     17877 A-----------T
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            158561  2 -    216457 A-----------T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63036  2 +     76511 A-----------T
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254156  2 +   2543920 a-----------t
i Chinchilla_lanigera.JH722012.1                         C 0 I 2
s Chiropotes_israelita.k141_747660                           99639  2 +    146308 A-----------T
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          31447  2 -     50570 a-----------t
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18431748  2 -  18827391 A-----------T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18254  2 -     50209 A-----------T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425253  2 + 135778131 a-----------t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1913754  2 +   2368649 a-----------t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952003  2 + 200372422 A-----------T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40279  2 +     84244 A-----------T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549327  2 -  53390261 a-----------t
i Condylura_cristata.JH655891.1                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 51863  2 +     63868 C-----------T
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29792  2 -     87169 G-----------T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    838351  2 +   1526836 C-----------T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37109  1 +     51376 A------------
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16812720  2 +  35494412 g-----------t
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8631419 11 +  20541912 agGA-CACC-TGT
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37651  2 +     67921 A-----------T
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 2
s Elaphurus_davidianus.JRFZ01104969.1                       312201  2 +    607251 g-----------t
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 4
s Ellobius_lutescens.LOEQ01008920.1                          22371  1 -    110024 ------------t
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                            2290  2 +      8657 a-----------t
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16330943  2 -  41312741 g-----------t
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2147036  1 -  14770903 ------------c
i Eptesicus_fuscus.JH977646.1                            I 15 C 0
s Erythrocebus_patas.Contig38                             21208421  2 -  21539334 A-----------T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12391  2 +    133382 G-----------T
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             26344  2 -     44125 G-----------T
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20238247  2 + 206538554 g-----------t
i Felis_catus.CM001381.2                                 I 2 C 0
s Felis_catus_fca126.CM031415.1                           20197090  2 + 205367284 g-----------t
i Felis_catus_fca126.CM031415.1                          I 2 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 10844  2 -     36744 G-----------T
i Felis_nigripes.FelNig_flattened_line_20823             I 2 C 0
s Fukomys_damarensis.KN121974.1                             851672  2 +   3816255 a-----------t
i Fukomys_damarensis.KN121974.1                          C 0 I 2
s Galeopterus_variegatus.GalVar_scaffold_108840               2769  2 -      9135 C-----------T
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     610160  2 -    660261 g-----------t
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            32190  2 +     49224 C-----------T
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              19255  2 -     32273 A-----------T
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341391  2 + 186649187 a-----------t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33897  2 +     78134 C-----------T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243631  2 +    327341 G-----------T
i Helogale_parvula.HelPar_flattened_line_2585            I 2 C 0
s Heterocephalus_glaber.JH602082.1                        20663456  2 +  22651954 a-----------g
i Heterocephalus_glaber.JH602082.1                       C 0 I 2
s Hoolock_leuconedys.ctg274                                    438055  2 +    630532 A-----------T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46333  2 +     55795 G-----------T
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84345  2 +    135385 A-----------T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 3
s Ictidomys_tridecemlineatus.JH393364.1                    7522247  2 -   7955117 c-----------t
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               23926  2 +     23964 G-----------T
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8278374  2 -   9596543 A-----------C
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                3301  2 -      3359 G-----------T
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         15699  2 -     38430 a-----------t
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    17682  1 -     42476 ------------T
i Lasiurus_borealis.LasBor_scaffold_32767                I 35 C 0
s Leptonychotes_weddellii.KB714746.1                       3044396  2 +   3914936 g-----------t
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     8045  2 -     14121 C-----------T
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             268990  2 -    662738 g-----------t
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                17957943  2 -  59628241 g-----------t
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91959  7 +     94391 A-TA--AC---AT
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             11655  2 +     13704 g-----------t
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 34617  2 +    140813 C-----------T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12184060  2 -  29670104 C-----------T
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    4600  2 +     10310 G-----------T
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                17166 11 -     19307 AGGA-CACA-TGT
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11262350  2 -  27267610 c-----------t
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1851583  1 +   8254450 ------------t
i Miniopterus_natalensis.LDJU01000034.1                  I 13 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             35263  1 +     64694 ------------T
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 13 C 0
s Miopithecus_ogouensis.k141_534055                          12330  2 -     28506 A-----------T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         7264  2 -      8324 g-----------t
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    28103  2 -    437263 G-----------T
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142967 11 -    366855 A-GAACACA-TGT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mus_caroli.LT608237.1                                   84362996  2 - 120012414 C-----------T
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87652497  2 - 129401213 C-----------T
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31357231  2 -  89631738 c-----------t
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90754986  2 - 130317789 C-----------T
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               303044  2 -  14710649 g-----------t
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     72419  2 -     80779 A-----------T
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 I 2
s Nannospalax_galili.KL204047.1                            2036789  2 -   3037898 T-----------T
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               18386  2 +     21681 A-----------T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308857  2 +  31847680 g-----------t
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5867072  2 +   7148211 g-----------t
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    759168 11 +    783361 A-GAGCACA-TGT
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 2
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150742  2 -   9404916 g-----------t
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 2 C 0
s Ochotona_princeps.JH802162.1                             1365469  2 +   3988456 C-----------T
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              507999  2 -   2017862 g-----------t
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          78076  2 -    150152 g-----------t
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   27008  2 +     28053 C-----------T
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    82010  2 +    102263 C-----------T
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2782983  2 -  10937097 g-----------t
i Orcinus_orca.KB316932.1                                C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67148946  2 + 174332312 C-----------T
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       463687  2 -    559221 g-----------t
i Otocyon_megalotis.JAEUCK010005147.1                    T 1612 I 1612
s Pan_paniscus.KQ411613.1                                    47356  2 +     80009 a-----------c
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146226  2 + 189151597 a-----------c
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152452  2 +    230217 G-----------T
i Panthera_onca.PanOnc_flattened_line_3271               I 2 C 0
s Panthera_pardus.KV860321.1                                265661  2 +  18783137 g-----------t
i Panthera_pardus.KV860321.1                             I 2 C 0
s Panthera_tigris.KE722367.1                               4722541  2 -   8748460 g-----------t
i Panthera_tigris.KE722367.1                             I 2 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13952  2 -     78924 G-----------T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18196637  2 -  18517816 t-----------t
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     29386  2 -     29689 A-----------T
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 I 2
s Phocoena_phocoena.PhoPho_flattened_line_24159              10026  2 +     63832 G-----------T
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            1458  2 +     68526 A-----------T
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        41604  2 +     89929 A-----------T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43018  2 +     51399 A-----------T
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299255  2 -  14605196 a-----------t
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3056  1 +     22620 ------------T
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 12 C 0
s Pithecia_albicans.k141_1476471                              4901  2 +     26961 A-----------T
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1046  2 +     23417 A-----------T
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                4893  2 +     29694 A-----------T
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          29919  2 +     52772 A-----------T
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           4915  2 +     26198 A-----------T
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3941463  2 +   4542175 A-----------T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            4879  2 -     23490 a-----------t
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9135  2 -     39866 A-----------T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18301  2 +     34906 A-----------T
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       22565  2 +     87950 A-----------T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23392  2 +     88961 A-----------T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9063  2 +     39403 A-----------T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          22844  2 -     87928 A-----------T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         29803  2 +     60166 A-----------T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30000  2 +     67232 A-----------T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          25473  2 +     90634 A-----------T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          22845  2 -     89403 A-----------T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189134372  2 + 189387572 a-----------t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9573981  2 +   9816681 A-----------T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76570  2 -     81375 A-----------T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8387  2 +     19060 A-----------T
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            12258  2 -     21651 c-----------t
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            16452 11 -     21811 a-GA-AAACATGT
i Pteronotus_parnellii.KE909381.1                        C 0 I 2
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41857  2 +     42204 G-----------T
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22978049 10 +  28871421 N-NN-NNNN-NNN
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Puma_concolor.QAVW01001104.1                            20275611  2 -  38429054 g-----------t
i Puma_concolor.QAVW01001104.1                           I 2 C 0
s Pygathrix_cinerea.k141_1153803                             18372  2 -     91421 A-----------T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612495  2 +   7812017 A-----------T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18402  2 -     72585 A-----------T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6818  2 +     55207 G-----------T
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinopithecus_bieti.k119_217274                            10070  2 -     11128 A-----------T
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239438  2 - 195417433 a-----------t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675085  2 +   7961872 A-----------T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89139 10 -     96226 A-TA-CATG-TGT
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154475  2 -    313613 A-----------T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 1 C 0
s Semnopithecus_entellus.k141_1672505                         3244  2 -     12572 A-----------T
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30096  2 +     39453 A-----------T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           10604  2 +     27826 A-----------T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10140  2 -     19483 A-----------T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3443  2 -     12762 A-----------T
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3288  2 +     13763 A-----------T
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     2153  2 -     30804 C-----------T
i Sigmodon_hispidus.SigHis_scaffold_42075                I 5 C 0
s Sorex_araneus.JH798187.1                                13652295  2 -  18376816 A-----------T
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1955393  2 -   3870691 C-----------t
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             32332  2 +     97271 g-----------t
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              19627  1 -    196729 ------------T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6812442  2 +  69701581 a-----------t
i Sus_scrofa.CM000828.4                                  I 9 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                12138  1 +     41958 ------------G
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 9 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106685  2 +    114563 A-----------T
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 2
s Tonatia_saurophila.TonSau_scaffold_294                     82513 11 +    610378 AGGA-CACG-TGT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         14189  2 -     20410 A-----------T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3305  2 -     12674 A-----------T
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14297  2 +     19930 A-----------T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      10692  2 -     19997 A-----------T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            50839  2 -     60166 A-----------T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18300  2 -     27529 A-----------T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                   10662  2 -     10723 A-----------T
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28162  2 +     32220 A-----------T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942259  2 +   6242583 A-----------T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11512  2 +     20839 A-----------T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    1135  2 +     27266 G-----------T
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tupaia_chinensis.KB320699.1                              2157213  2 +   4065304 c-----------t
i Tupaia_chinensis.KB320699.1                            C 0 I 66
s Tursiops_truncatus.MRVK01000835.1                       15739225  2 +  33153633 g-----------t
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54577  2 -     77625 A-----------G
i Uropsilus_gracilis.UroGra_scaffold_12083               I 3 C 0
s Ursus_maritimus.KK499267.1                               4851717  2 -   5085361 g-----------t
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                 5373088  4 -   5488506 a---------tgt
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 12132  2 -     43706 G-----------T
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 1277
s Xerus_inauris.XerIna_scaffold_2302                          2396  2 +    224448 T-----------C
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      16116  2 +     63895 A-----------T
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Trachypithecus_laotum.k141_907409                          11930  0 -     21137 C
e Trachypithecus_hatinhensis.k141_17719                         27  0 +      9229 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   7643  0 +      8208 C
e Theropithecus_gelada.CM009954.1                        186431765  0 + 186847797 C
e Tarsius_wallacei.k141_254427                                1877  3 -     16117 I
e Tarsius_lariang.k141_2201908                               27080  3 +     70052 I
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73921  0 +    116680 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Rhinolophus_sinicus.LVEH01000134.1                        368295  0 -   3329780 C
e Rattus_norvegicus.chr16                                 53571770 803 +  90668790 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Papio_ursinus.k141_5274964                                  3141  0 -     11374 C
e Papio_papio.k141_802527                                    12142  0 +     27711 C
e Papio_kindae.k141_1936966                                   8849  0 +     41871 C
e Papio_hamadryas.Contig39                                20566917  0 +  20919399 C
e Papio_cynocephalus.k141_4307930                            10109  0 +     20448 C
e Papio_anubis.CM001495.2                                183446459  0 + 183742232 C
e Pantholops_hodgsonii.KE114653.1                          1266235  0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      175330  0 -    191736 C
e Ovis_aries.CM001607.2                                   17587342  0 +  44047080 C
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odocoileus_virginianus.KZ100018.1                         145852 291 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190536  0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_281845                        1264 11 +      1835 I
e Myotis_lucifugus.GL429869.1                              3905112 11 -   4330536 I
e Myotis_davidii.KB100139.1                                1589012 11 -   6019432 I
e Myotis_brandtii.KE162005.1                                280015 1754 -  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           8118 12 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   2227  0 +     82753 C
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Megaderma_lyra.MegLyr_scaffold_4542                        14651  0 -    207569 C
e Marmota_marmota.CZRN01000018.1                          33104532  0 -  40650429 C
e Manis_pentadactyla.KN006162.1                              51539 28 -    317179 I
e Manis_javanica.JSZB01003497.1                              19521 28 +    737560 I
e Mandrillus_sphinx.Contig270                               354769  0 +    752769 C
e Mandrillus_leucophaeus.scaffold280                      23940653  0 -  24302211 C
e Macaca_tonkeana.k141_1498238                               29065  0 -     45290 C
e Macaca_thibetana.k99_256239                                 8434  0 -     24072 C
e Macaca_silenus.Contig273                                  332984  0 -    668171 C
e Macaca_siberu.k141_635500                                  10122  0 -     14993 C
e Macaca_radiata.k141_3680011                                10325  0 +     20474 C
e Macaca_nigra.k141_1655396                                  83332  0 +     89720 C
e Macaca_nemestrina.KQ007038.1                            25461131  0 -  25927173 C
e Macaca_mulatta.NC_041758.1                             186842555  0 + 187317192 C
e Macaca_maura.k141_2733130                                  27476  0 +     37952 C
e Macaca_leonina.k141_3550399                                18898  0 -     29190 C
e Macaca_fuscata.k119_255327                                  9434  0 -     23192 C
e Macaca_fascicularis.k141_814140                            83743  0 -    114318 C
e Macaca_cyclopis.k119_18836                                 15967  0 -     26193 C
e Macaca_assamensis.Contig5                               59679450  0 +  60120075 C
e Macaca_arctoides.k141_2326796                              10196  0 +     40492 C
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lophocebus_aterrimus.ctg367                              1440386  0 +   1826925 C
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_101188                404  0 +      9903 C
e Hipposideros_armiger.JXIK01000431.1                       111834  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 19369  0 +     36099 C
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64769  0 +   2246927 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Crocidura_indochinensis.CroInd_scaffold_37019               4143  0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           1799  0 +     23735 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1750  0 -      8501 C
e Cercocebus_torquatus.k141_3057011                          12028  0 +     27781 C
e Cercocebus_lunulatus.k141_3342297                           3933  0 -     14043 C
e Cercocebus_chrysogaster.k141_1540778                        3338  0 +     17872 C
e Cercocebus_atys.KQ010504.1                               4478844  0 +   4669795 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Cephalopachus_bancanus.k141_1423433                         6085  3 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Castor_canadensis.CasCan_scaffold_2074                    138573  0 +    179628 C
e Carlito_syrichta.NW_007259797.1                           156587  3 -    496798 I
e Capra_hircus.CM004588.1                                 18061879  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18831159  0 +  46296322 C
e Bubalus_bubalis.KI419123.1                               2820562  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18084882  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1126808  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20274244  0 +  48749331 C
e Bison_bison.KN261452.1                                    201063  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    28132  0 +     34529 C
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Antilocapra_americana.AntAmePen_scaffold_12469             99530  0 -    100397 C
e Ammotragus_lervia.NIVO01071767.1                          677045  0 -   2318259 C

a score=0.000000
s hg38.chrUn_KI270753v1                                      10015 14 +     62944 CTAACTT--AT-------A------C-----A----GT
s Acinonyx_jubatus.LLWD01001279.1                           828606  8 -   1699592 t--a------t-------a------t-----a----tt
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     72603 10 +     87051 A--T------T-------ATG----T-----G----AT
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511916  9 -  29979442 t--a------t-------a------t----ca----at
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             80996  9 -    347723 t--a------c-------g------t----ca----at
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     75675  8 -     89534 A--A------T-------T------T-----C----AT
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   17886  8 -     52922 CTAACTT--A----------------------------
i Allenopithecus_nigroviridis.k141_3361533               C 0 I 2
s Allochrocebus_lhoesti.k141_4309873                         17817 14 -     28001 CTAACTT--AT-------A------C-----A----AT
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8312 14 -     18505 CTAACTT--AT-------A------C-----A----AT
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9165 14 -     12518 CTAACTT--AT-------A------C-----A----AT
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              9631 14 +     51355 CTAACTT--AT-------A------T-----A----AT
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                2736 14 -     36483 CTAACTT--AT-------A------T-----A----AT
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13193 14 +     28687 CTAACTT--AT-------A------T-----A----AT
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 1661 14 +     27940 CTAACTT--AT-------A------T-----A----AT
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            2743 14 -      9457 CTAACTT--AT-------A------T-----A----AT
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             1701 14 +     30492 CTAACTT--AT-------A------T-----A----AT
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              5696 12 +     47717 CTAAC----AT-------A------T-----A----AT
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              2428 14 +      5663 CTAACTT--AT-------A------T-----A----AT
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             16880 14 +     50774 CTAACTT--AT-------A------T-----A----AT
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          677045  7 -   2318259 ---a------t-------a------t-----c----at
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      186680  8 +    412891 T--A------T-------A------T-----A----CT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             99530  6 -    100397 ----------T-------A------T-----C----AT
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13927  8 +     20879 A--A------T-------A------T-----A----AT
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6086  8 +     43469 C--A------T-------A------T-----A----GT
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21209895 12 -  21539123 ctaattt---t-------g------t-----a----a-
i Ateles_geoffroyi_b.tarseq_1536                            C 0 I 2
s Ateles_belzebuth.k141_445860                               44691 12 -     48001 ctaattt---t-------g------t-----a----a-
i Ateles_belzebuth.k141_445860                           C 0 I 2
s Ateles_chamek.k141_1806455                                 27495 12 -     30947 ctaattt---t-------g------t-----a----a-
i Ateles_chamek.k141_1806455                             C 0 I 2
s Ateles_geoffroyi_a.k141_833924                                9267 12 -     89868 ctaattt---t-------g------t-----a----a-
i Ateles_geoffroyi_a.k141_833924                           C 0 I 2
s Ateles_marginatus.k141_803263                              13651 12 -     40414 ctaattt---t-------g------t-----a----a-
i Ateles_marginatus.k141_803263                          C 0 I 2
s Ateles_paniscus.k141_457735                                21540 12 +     72325 CTAATTT---T-------G------T-----A----A-
i Ateles_paniscus.k141_457735                            C 0 I 2
s Balaenoptera_acutorostrata.KI537508.1                   15193081  8 +  23207421 t--a------t-------a------t-----a----at
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         3546  8 -     18090 t--a------t-------a------t-----a----at
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    28132  7 +     34529 ---A------T-------A------T-----C----AT
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    201063  7 -    288883 ---A------T-------G------A-----g----ac
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20274244  7 +  48749331 ---a------t-------G------A-----g----ac
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1126808  7 -   1948126 ---A------T-------G------A-----g----ac
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18084882  7 +  45695690 ---a------t-------G------A-----g----ac
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2820562  7 +   4408762 ---A------T-------G------A-----G----ac
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                102512 14 -    122966 CTAACTT--AT-------A------T-----A----AT
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   62017 14 +     81800 CTAACTT--AT-------A------T-----A----AT
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31197 14 -     95584 CTAACTT--AT-------A------T-----A----AT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55298 14 -    119600 CTAACTT--AT-------A------T-----A----AT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10003573  8 -  17673402 t--a------t-------a------t-----c----at
i Camelus_bactrianus.KN276810.1                          C 0 I 192
s Camelus_dromedarius.KN272107.1                           2336049  8 -   7040546 t--a------t-------a------t-----c----at
i Camelus_dromedarius.KN272107.1                         C 0 I 188
s Camelus_ferus.KB017975.1                                  404348  8 -   1652518 t--a------t-------a------t-----c----at
i Camelus_ferus.KB017975.1                               C 0 I 187
s CanFam4.chr16                                           17801793  9 -  60362399 t--a------t-------a------t----ca----at
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     2534  9 -     43241 t--a------t-------a------t----ca----at
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9037236  9 -   9314153 t--a------t-------a------t----ca----at
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17961705  9 -  59632846 t--a------t-------a------t----ca----at
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18503007  9 +  63665305 t--a------t-------a------t----ca----at
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18831159  7 +  46296322 ---A------T-------a------t-----c----at
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18061879  7 -  44709034 ---A------T-------a------t-----c----at
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           156590  1 -    496798 -------------------------------------T
i Carlito_syrichta.NW_007259797.1                        I 3 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    2239  2 -     12242 C--A----------------------------------
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 13
s Carollia_perspicillata.CarPer_scaffold_92756                6428  8 -     11696 T--A------T-------A------T-----C----AT
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138573  6 +    179628 ----------T-------A------T-----A----AT
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     94880  8 +    217609 T--A------T-------A------T-----A----AT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         6088  1 +     31688 -------------------------------------T
i Cephalopachus_bancanus.k141_1423433                    I 3 C 0
s Cercocebus_atys.KQ010504.1                               4478844 13 +   4669795 -taactt--at-------a------c-----a----at
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3338 13 +     17872 -TAACTT--AT-------A------C-----A----AT
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           3933 13 -     14043 -TAACTT--AT-------A------C-----A----AT
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12028 13 +     27781 -TAACTT--AT-------A------C-----A----AT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12177 14 -     20310 CTAACTT--AT-------A------C-----A----AT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15157 14 +     29689 CTAACTT--AT-------A------C-----A----AT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            9913 14 -     20078 CTAACTT--AT-------A------C-----A----AT
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          17828 14 -     27936 CTAACTT--AT-------A------C-----A----AT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            6697 11 -     17152 CTAACTT--AT-------A------C------------
i Cercopithecus_lowei.k141_1854285                       C 0 I 1
s Cercopithecus_albogularis.ctg5                                38826427 14 +  39242232 CTAACTT--AT-------A------C-----A----AT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21225931 14 -  21565898 CTAACTT--AT-------A------C-----A----AT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43050 14 -     53127 CTAACTT--AT-------A------C-----A----AT
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3300 14 +     13442 CTAACTT--AT-------A------C-----G----AT
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       17846 14 -     27947 CTAACTT--AT-------A------C-----A----AT
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                          875 14 +     10558 CTAACTT--AT-------A------T-----A----AT
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          3880 14 +     14005 CTAACTT--AT-------A------C-----A----AT
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1120 14 -     17098 CTAACTT--AT-------A------T-----A----AT
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                               996 14 +     17877 CTAACTT--AT-------A------T-----A----AT
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            158563 14 -    216457 CTAACTT--AT-------A------T-----A----AT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63038 14 +     76511 CTAACTT--AT-------A------T-----A----AT
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254160  6 +   2543920 -------------------------c-----a--aaat
i Chinchilla_lanigera.JH722012.1                         I 2 C 0
s Chiropotes_israelita.k141_747660                           99641 14 +    146308 CTAACTT--AT-------A------T-----A----AT
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          31449 14 -     50570 ctaactt--at-------a------t-----a----at
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18431750 14 -  18827391 CTAACTT--AT-------A------C-----A----AT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18256 14 -     50209 CTAACTT--AT-------A------C-----A----AT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425255 14 + 135778131 ctaactt--at-------a------c-----a----at
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1913756 14 +   2368649 ctaactt--at-------a------c-----a----at
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952005 14 + 200372422 CTAACTT--AT-------A------C-----A----AC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40281 14 +     84244 CTAACTT--AT-------A------C-----A----AT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549329  8 -  53390261 t--a------t-------a------t-----a----aa
i Condylura_cristata.JH655891.1                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 51865 10 +     63868 A--T------C-------ATG----T-----G----AA
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29794  8 -     87169 T--A------T-------A------T-----A----TT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    838353 15 +   1526836 A--A------TGTGGGCCA------T-----G----AT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37110  3 +     51376 -------------------------C-----A----T-
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 98
s Delphinapterus_leucas.KZ290073.1                        16812722  8 +  35494412 t--a------t-------a------t-----a----at
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8631430  8 +  20541912 T--A------T-------A------T-----A----AT
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37655  6 +     67921 -------------------------C-----A--AAAT
i Dinomys_branickii.DinBra_scaffold_21862                I 2 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       312207  4 +    607251 -------------------------t-----c----at
i Elaphurus_davidianus.JRFZ01104969.1                    I 4 C 0
s Ellobius_lutescens.LOEQ01008920.1                          22372  4 -    110024 c--t------t-------a-------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 3
s Ellobius_talpinus.LOJH01081419.1                            2292  4 +      8657 a--t------t-------a-------------------
i Ellobius_talpinus.LOJH01081419.1                       C 0 I 3
s Enhydra_lutris.KZ291758.1                               16330945  9 -  41312741 t--a------c-------a------t----ca----at
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2147037  8 -  14770903 t--t------t-------a------t-----a----at
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Erythrocebus_patas.Contig38                             21208423 14 -  21539334 CTAACTT--AT-------A------C-----A----AT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12393  8 +    133382 T--A------T-------A------T-----A----AT
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             26346  8 -     44125 T--A------T-------A------T-----A----AT
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20238249  8 + 206538554 t--a------t-------a------t-----a----tt
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20197092  8 + 205367284 t--a------t-------a------t-----a----tt
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 10846  8 -     36744 T--A------T-------A------T-----A----TT
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             851676  4 +   3816255 -------------------------t-----a----at
i Fukomys_damarensis.KN121974.1                          I 2 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               2771 12 -      9135 A--ACCT--TT-------A------T-----T----AT
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     610162  8 -    660261 t--a------t-------a------t-----c----at
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            32192 14 +     49224 A--A---CA-T-------A------T-----GTTGTAT
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              19257 14 -     32273 CTAACTT--AT-------A------C-----A----GT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341393 14 + 186649187 ctaactt--at-------a------c-----a----gt
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33899 14 +     78134 A--G---CA-T-------A------T-----GTTGTAT
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243633  8 +    327341 T--A------T-------A------T-----A----TT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 19369  7 +     36099 ---A------T-------A------T-----C----AT
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20663460  4 +  22651954 -------------------------t-----a----at
i Heterocephalus_glaber.JH602082.1                       I 2 C 0
s Hoolock_leuconedys.ctg274                                    438057 14 +    630532 CTAACTT--AT-------A------C-----T----AT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46335  8 +     55795 T--A------T-------A------T-----A----TT
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84350  1 +    135385 -------------------------------------T
i Hystrix_cristata.HysCri_scaffold_5660                  I 3 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7522249 10 -   7955117 a--a---ca-t-------a------t-----a----at
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               23928  8 +     23964 T--A------T-------A------T-----A----AT
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8278376  8 -   9596543 A--A------T-------T------T-----C----AT
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                3303  8 -      3359 T--A------T-------A------T-----A----AT
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         15701 12 -     38430 ctaac----at-------a------t-----a----at
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    17683  8 -     42476 T--A------T-------A------T-----A----AT
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3044398  9 +   3914936 t--a------t-------a------t----ca----at
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     8047 13 -     14121 A--A------T-------A------TGCTAGA----AT
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             268992  8 -    662738 t--a------t-------a------t-----a----at
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1440386 13 +   1826925 -TAACTT--AT-------A------C-----A----AT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17957945  9 -  59628241 t--a------t-------a------t----ca----at
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                              10196 13 +     40492 -TAACTT--AT-------A------C-----A----AT
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679450 13 +  60120075 -TAACTT--AT-------A------C-----A----AT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 15967 13 -     26193 -TAACTT--AT-------A------C-----A----AT
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            83743 13 -    114318 -TAACTT--AT-------A------C-----A----AT
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9434 13 -     23192 -TAACTT--AT-------A------C-----A----AT
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                18898 13 -     29190 -TAACTT--AT-------A------C-----A----AT
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27476 13 +     37952 -TAACTT--AT-------A------C-----A----AT
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842555 11 + 187317192 -taac----at-------a------c-----a----at
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461131 13 -  25927173 -taactt--at-------a------c-----a----at
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83332 13 +     89720 -TAACTT--AT-------A------C-----A----AT
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10325 13 +     20474 -TAACTT--AT-------A------C-----A----AT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10122 13 -     14993 -TAACTT--AT-------A------C-----A----AT
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  332984 13 -    668171 -TAACTT--AT-------A------C-----A----AT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8434 13 -     24072 -taactt--at-------a------c-----a----at
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29065 13 -     45290 -TAACTT--AT-------A------C-----A----AT
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91966  8 +     94391 T--A------T-------A------T-----A----AT
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23940653 13 -  24302211 -TAACTT--AT-------A------C-----A----AT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354769 13 +    752769 -TAACTT--AT-------A------C-----A----AT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              19549  7 +    737560 ---a------a-------a------t-----a----tt
i Manis_javanica.JSZB01003497.1                          I 28 C 0
s Manis_pentadactyla.KN006162.1                              51567  7 -    317179 ---a------a-------a------t-----a----ca
i Manis_pentadactyla.KN006162.1                          I 28 C 0
s Marmota_marmota.CZRN01000018.1                          33104532 10 -  40650429 a--a---ca-t-------a------t-----a----at
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             11657  9 +     13704 t--a------c-------a------t----ca----at
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 34619  4 +    140813 A--T------T-------A-------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 4
s Mesocricetus_auratus.KB708134.1                         12184062 17 -  29670104 A--T------T-------ATGTATATG-T-GG----TT
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    4602  8 +     10310 T--A------T-------A------T-----A----AT
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                17177  8 -     19307 T--A------T-------A------T-----C----AT
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11262352 10 -  27267610 a--c------t-------a----tat-----g----at
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1851584  8 +   8254450 t--a------t-------a------t-----a----at
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             35264  8 +     64694 T--A------T-------A------T-----A----AT
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                          12332 14 -     28506 CTAACTT--AT-------A------C-----C----AT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         7266  9 -      8324 t--a------t-------a------t----ca----at
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    28105  8 -    437263 T--A------T-------A------T-----A----AT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142978  8 -    366855 C--A------A-------C------T-----A----AT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   2227  7 +     82753 ---A------T-------A------T-----C----AT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           8130  9 +     14753 t--a------t-------a------t----ta----at
i Murina_feae.MurFea_scaffold_85699                      I 12 C 0
s Mus_caroli.LT608237.1                                   84362998 10 - 120012414 A--T------T-------ATG----T-----G----AT
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87652499 10 - 129401213 A--T------T-------ATG----T-----G----AT
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31357233 10 -  89631738 a--t------t-------a----tgt-----g----at
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90754988 10 - 130317789 A--T------T-------ATG----T-----G----AT
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               303046  9 -  14710649 t--a------c-------a------t----ca----at
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     72423  3 -     80779 -------------------------C-----A----A-
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 2 I 14
s Myotis_brandtii.KE162005.1                                281769  6 -  10118263 ------------------A------T--T--A----AA
i Myotis_brandtii.KE162005.1                             I 1754 C 0
s Myotis_davidii.KB100139.1                                1589023  6 -   6019432 ------------------A------T--T--A----AA
i Myotis_davidii.KB100139.1                              I 11 C 0
s Myotis_lucifugus.GL429869.1                              3905123  6 -   4330536 ------------------a------t----ta----ta
i Myotis_lucifugus.GL429869.1                            I 11 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                        1275  6 +      1835 ------------------A------T--T--A----AA
i Myotis_myotis.MyoMyo_scaffold_281845                   I 11 C 0
s Nannospalax_galili.KL204047.1                            2036791 13 -   3037898 G--T------T-------AT--A--T-----A-ACAAT
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               18388 12 +     21681 CTAAC----AT-------A------C-----A----AT
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308859  9 +  31847680 t--a------t-------a------t----ca----at
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5867074  8 +   7148211 t--a------t-------a------t-----a----at
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    759181  2 +    783361 ------------------------------------AT
i Noctilio_leporinus.NocLep_scaffold_251                 I 2 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150744  8 -   9404916 t--a------t-------a------t-----a----at
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Ochotona_princeps.JH802162.1                             1365471 13 +   3988456 A--G------T-------A------CACTAGA----AC
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              508001  9 -   2017862 t--a------t-------a------t----ca----at
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          78078  8 -    150152 t--a------A-------A------T-----C----AT
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   27010 10 +     28053 A--T------T-------A--CA--T-----G----AT
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    82012 10 +    102263 A--T------T-------ATG----T-----G----AT
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2782985  8 -  10937097 t--a------t-------a------t-----a----at
i Orcinus_orca.KB316932.1                                C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67148948 13 + 174332312 A--A------T-------A------TGCTAGA----AT
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       465301  9 -    559221 t--a------t-------a------t----ca----at
i Otocyon_megalotis.JAEUCK010005147.1                    I 1612 T 1613
s Ovis_aries.CM001607.2                                   17587342  7 +  44047080 ---a------t-------a------t-----c----at
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      175330  7 -    191736 ---A------T-------A------T-----C----AT
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    47358 14 +     80009 ctaactt--at-------a------c-----a----gt
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146228 14 + 189151597 ctaactt--at-------a------c-----a----gt
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152454  8 +    230217 T--A------T-------A------T-----A----TT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                265663  8 +  18783137 t--a------t-------a------t-----a----tt
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4722543  8 -   8748460 t--a------t-------a------t-----a----tt
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1266235  7 -   2937107 ---a------t-------a------t-----c----at
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183446459 13 + 183742232 -taactt--at-------a------c-----a----at
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10109 13 +     20448 -TAACTT--AT-------A------C-----A----AT
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20566917 13 +  20919399 -TAACTT--AT-------A------C-----A----AT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   8849 13 +     41871 -TAACTT--AT-------A------C-----A----AT
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12142 13 +     27711 -TAACTT--AT-------A------C-----A----AT
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3141 13 -     11374 -TAACTT--AT-------A------C-----A----AT
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13954  8 -     78924 T--A------T-------A------T-----A----TT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18196639 10 -  18517816 a--t------t-------a----cat-----g----at
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     29390  4 -     29689 -------------------------C-----A----AT
i Petromus_typicus.PetTyp_scaffold_42190                 I 2 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              10028  8 +     63832 T--A------T-------A------T-----A----AT
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            1460 14 +     68526 CTAACTT--AT-------A------C-----A----AC
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        41606 14 +     89929 CTAACTT--AT-------A------C-----A----AC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43020 14 +     51399 CTAACTT--AT-------A------C-----A----AC
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299257 14 -  14605196 ctaaCTT--AT-------A------c-----a----ac
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3057  8 +     22620 T--A------T-------A------T-----A----AT
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pithecia_albicans.k141_1476471                              4903 14 +     26961 CTAACTT--AT-------A------T-----A----AT
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1048 14 +     23417 CTAACTT--AT-------A------T-----A----AT
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                4895 14 +     29694 CTAACTT--AT-------A------T-----A----AT
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          29921 14 +     52772 CTAACTT--AT-------A------T-----A----AT
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           4917 14 +     26198 CTAACTT--AT-------A------T-----A----AT
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3941465 14 +   4542175 CTAACTT--AT-------A------T-----A----AT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            4881 14 -     23490 ctaactt--at-------a------t-----a----at
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9137 14 -     39866 CTAACTT--AT-------A------T-----A----AT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18303 14 +     34906 CTAACTT--AT-------A------T-----A----AT
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       22567 12 +     87950 CTAAC----AT-------A------T-----A----AT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23394 14 +     88961 CTAACTT--AT-------A------T-----A----AT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9065 14 +     39403 CTAACTT--AT-------A------T-----A----AT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          22846 14 -     87928 CTAACTT--AT-------A------T-----A----AT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         29805 14 +     60166 CTAACTT--AT-------A------T-----A----AT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30002 14 +     67232 CTAACTT--AT-------A------T-----A----AT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          25475 14 +     90634 CTAACTT--AT-------A------T-----A----AT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          22847 14 -     89403 CTAACTT--AT-------A------T-----A----AT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189134374 14 + 189387572 ctaactt--at-------a------c-----a----at
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9573983 14 +   9816681 CTAACTT--AT-------A------C-----A----AT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76572 12 -     81375 CTAAC----AT-------A------C-----A----AT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8389 12 +     19060 CTAAC----AT-------A------C-----A----AT
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Pteronotus_parnellii.KE909381.1                            16465  2 -     21811 ------------------------------------AT
i Pteronotus_parnellii.KE909381.1                        I 2 C 0
s Psammomys_obesus.NESX01036370.1                            12260  4 -     21651 a--t------t-------a-------------------
i Psammomys_obesus.NESX01036370.1                        C 0 I 4
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41859  9 +     42204 T--A------C-------A------T-C---A----AT
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22978059  8 +  28871421 N--N------N-------N------N-----N----NN
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Puma_concolor.QAVW01001104.1                            20275613  8 -  38429054 t--a------t-------a------t-----a----tt
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             18374 12 -     91421 CTAAC----AT-------A------C-----A----AT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612497 12 +   7812017 CTAAC----AT-------A------C-----A----AT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18404 12 -     72585 CTAAC----AT-------A------C-----A----AT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6820  8 +     55207 T--A------T-------A------T-----C----AT
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinopithecus_bieti.k119_217274                            10072 12 -     11128 CTAAC----AT-------A------C-----A----AT
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239440 12 - 195417433 ctaac----at-------a------c-----a----at
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675087 12 +   7961872 CTAAC----AT-------A------C-----A----AT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89149  8 -     96226 T--A------T-------A------T-----A----AT
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154477  4 -    313613 A--A------T-------A-------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                         3246 12 -     12572 CTAAC----AT-------A------C-----A----AT
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30098 12 +     39453 CTAAC----AT-------A------C-----A----AT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           10606 12 +     27826 CTAAC----AT-------A------C-----A----AT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10142 12 -     19483 CTAAC----AT-------A------C-----A----AT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3445 12 -     12762 CTAAC----AT-------A------C-----A----AT
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3290 12 +     13763 CTAAC----AT-------A------C-----A----AT
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     2155 10 -     30804 A--T------T-------A--CA--T-----A----AT
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Sorex_araneus.JH798187.1                                13652297  4 -  18376816 T--A------T-------A-------------------
i Sorex_araneus.JH798187.1                               C 0 I 1
s Spermophilus_dauricus.KZ294078.1                         1955395 10 -   3870691 g--a---ca-t-------a------t-----a----at
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             32334  9 +     97271 t--a------t-------a------t----ca----at
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              19628  8 -    196729 T--A------T-------A------T-----A----TT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6812444  8 +  69701581 t--a------t-------a------t-----a----at
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                12139  8 +     41958 T--A------T-------A------T-----G----AT
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tarsius_lariang.k141_2201908                               27083  1 +     70052 -------------------------------------T
i Tarsius_lariang.k141_2201908                           I 3 C 0
s Tarsius_wallacei.k141_254427                                1880  1 -     16117 -------------------------------------T
i Tarsius_wallacei.k141_254427                           I 3 C 0
s Theropithecus_gelada.CM009954.1                        186431765 13 + 186847797 -taactt--at-------a------c-----a----at
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106689  3 +    114563 -------------------------C-----A----A-
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 2 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     82524  8 +    610378 T--A------T-------A------T-----A----AT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         14191 12 -     20410 CTAAC----AT-------A------C-----A----AT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3307 12 -     12674 CTAAC----AT-------A------C-----A----AT
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14299 12 +     19930 CTAAC----AT-------A------C-----A----AT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      10694 12 -     19997 CTAAC----AT-------A------C-----A----AT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            50841 12 -     60166 CTAAC----AT-------A------C-----A----AT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18302 12 -     27529 CTAAC----AT-------A------C-----A----AT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                   10664 12 -     10723 CTAAC----AT-------A------C-----A----AT
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28164 12 +     32220 CTAAC----AT-------A------C-----A----AT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942261 12 +   6242583 CTAAC----AT-------A------C-----A----AT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11514 12 +     20839 CTAAC----AT-------A------C-----A----AT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    1137  8 +     27266 T--A------T-------A------T-----C----AT
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tupaia_chinensis.KB320699.1                              2157281 13 +   4065304 t--actt-ttt-------c------t-----a----tt
i Tupaia_chinensis.KB320699.1                            I 66 C 0
s Tursiops_truncatus.MRVK01000835.1                       15739227  8 +  33153633 t--a------t-------a------t-----a----at
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54579  8 -     77625 T--C------T-------A------T-----A----GT
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4851719  9 -   5085361 t--a------t-------a------t----ca----at
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                 5373092  8 -   5488506 t--a------t-------a------t-----c----at
i Vicugna_pacos.KN270157.1                               C 0 I 194
s Vulpes_lagopus.VulLag_flattened_line_30954                 13411  9 -     43706 t--a------t-------a------t----ca----at
i Vulpes_lagopus.VulLag_flattened_line_30954             I 1277 T 1278
s Xerus_inauris.XerIna_scaffold_2302                          2398 10 +    224448 A--A---CA-T-------T------T-----G----AT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      16118  8 +     63895 A--A------T-------T------T-----C----AT
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Trachypithecus_laotum.k141_907409                          11930  0 -     21137 C
e Trachypithecus_hatinhensis.k141_17719                         27  0 +      9229 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   7643  0 +      8208 C
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73921  0 +    116680 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Rhinolophus_sinicus.LVEH01000134.1                        368295  0 -   3329780 C
e Rattus_norvegicus.chr16                                 53571770 803 +  90668790 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odocoileus_virginianus.KZ100018.1                         145852 291 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190536  0 +    196477 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Megaderma_lyra.MegLyr_scaffold_4542                        14651  0 -    207569 C
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_101188                404  0 +      9903 C
e Hipposideros_armiger.JXIK01000431.1                       111834  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64769  0 +   2246927 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Crocidura_indochinensis.CroInd_scaffold_37019               4143  0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           1799  0 +     23735 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1750  0 -      8501 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C

a score=0.000000
s hg38.chrUn_KI270753v1                                      10029 1 +     62944 A
s Acinonyx_jubatus.LLWD01001279.1                           828614 1 -   1699592 a
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     72613 1 +     87051 T
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 5
s Allactaga_bullata.AllBul_scaffold_9566                     75683 1 -     89534 T
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 4
s Allenopithecus_nigroviridis.k141_3361533                   17896 1 -     52922 A
i Allenopithecus_nigroviridis.k141_3361533               I 2 C 0
s Allochrocebus_lhoesti.k141_4309873                         17831 1 -     28001 A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8326 1 -     18505 A
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9179 1 -     12518 A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              9645 1 +     51355 A
i Alouatta_belzebul.k141_3560514                         C 0 I 4
s Alouatta_caraya.k141_1701091                                2750 1 -     36483 A
i Alouatta_caraya.k141_1701091                           C 0 I 4
s Alouatta_discolor.k141_566626                              13207 1 +     28687 A
i Alouatta_discolor.k141_566626                          C 0 I 4
s Alouatta_juara.k141_1302312                                 1675 1 +     27940 A
i Alouatta_juara.k141_1302312                            C 0 I 4
s Alouatta_macconnelli.k141_918386                            2757 1 -      9457 A
i Alouatta_macconnelli.k141_918386                       C 0 I 4
s Alouatta_nigerrima.k141_1929159                             1715 1 +     30492 A
i Alouatta_nigerrima.k141_1929159                        C 0 I 4
s Alouatta_palliata.k141_2135620                              5708 1 +     47717 A
i Alouatta_palliata.k141_2135620                         C 0 I 4
s Alouatta_puruensis.k141_362188                              2442 1 +      5663 A
i Alouatta_puruensis.k141_362188                         C 0 I 4
s Alouatta_seniculus.k141_117119                             16894 1 +     50774 A
i Alouatta_seniculus.k141_117119                         C 0 I 4
s Ammotragus_lervia.NIVO01071767.1                          677052 1 -   2318259 a
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      186688 1 +    412891 A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             99536 1 -    100397 A
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13935 1 +     20879 T
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 14
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6094 1 +     43469 A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193089 1 +  23207421 a
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         3554 1 -     18090 a
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    28139 1 +     34529 A
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    201070 1 -    288883 a
i Bison_bison.KN261452.1                                 C 0 I 631
s Bos_indicus.CM003047.1                                  20274251 1 +  48749331 a
i Bos_indicus.CM003047.1                                 C 0 I 633
s Bos_mutus.JH880303.1                                     1126815 1 -   1948126 a
i Bos_mutus.JH880303.1                                   C 0 I 621
s Bos_taurus.CM000203.6                                   18084889 1 +  45695690 a
i Bos_taurus.CM000203.6                                  C 0 I 633
s Bubalus_bubalis.KI419123.1                               2820569 1 +   4408762 a
i Bubalus_bubalis.KI419123.1                             C 0 I 632
s Cacajao_ayresi.k141_552049                                102526 1 -    122966 A
i Cacajao_ayresi.k141_552049                             C 0 I 4
s Cacajao_calvus.k141_5142                                   62031 1 +     81800 A
i Cacajao_calvus.k141_5142                               C 0 I 4
s Cacajao_hosomi.k141_81245                                  31211 1 -     95584 A
i Cacajao_hosomi.k141_81245                              C 0 I 4
s Cacajao_melanocephalus.k141_619699                         55312 1 -    119600 A
i Cacajao_melanocephalus.k141_619699                     C 0 I 4
s Camelus_bactrianus.KN276810.1                           10003773 1 -  17673402 a
i Camelus_bactrianus.KN276810.1                          I 192 C 0
s Camelus_dromedarius.KN272107.1                           2336245 1 -   7040546 a
i Camelus_dromedarius.KN272107.1                         I 188 C 0
s Camelus_ferus.KB017975.1                                  404543 1 -   1652518 a
i Camelus_ferus.KB017975.1                               I 187 C 0
s Capra_aegagrus.CM003241.1                               18831166 1 +  46296322 a
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18061886 1 -  44709034 a
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           156591 1 -    496798 A
i Carlito_syrichta.NW_007259797.1                        C 0 I 4
s Carollia_perspicillata.CarPer_scaffold_92756                6436 1 -     11696 A
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138579 1 +    179628 T
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 13
s Catagonus_wagneri.CatWag_scaffold_2839                     94888 1 +    217609 G
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         6089 1 +     31688 A
i Cephalopachus_bancanus.k141_1423433                    C 0 I 4
s Cercocebus_atys.KQ010504.1                               4478857 1 +   4669795 a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3351 1 +     17872 A
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           3946 1 -     14043 A
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12041 1 +     27781 A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12191 1 -     20310 A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15171 1 +     29689 A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            9927 1 -     20078 A
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          17842 1 -     27936 A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            6709 1 -     17152 A
i Cercopithecus_lowei.k141_1854285                       I 1 C 0
s Cercopithecus_albogularis.ctg5                                38826441 1 +  39242232 A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21225945 1 -  21565898 A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43064 1 -     53127 A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3314 1 +     13442 A
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       17860 1 -     27947 A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                          889 1 +     10558 A
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          3894 1 +     14005 A
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1134 1 -     17098 A
i Cheracebus_lucifer.k141_49986                          C 0 I 4
s Cheracebus_lugens.k141_1393925                              1010 1 +     17877 A
i Cheracebus_lugens.k141_1393925                         C 0 I 4
s Cheracebus_regulus.k141_471822                            158577 1 -    216457 A
i Cheracebus_regulus.k141_471822                         C 0 I 4
s Cheracebus_torquatus.k141_1170026                          63052 1 +     76511 A
i Cheracebus_torquatus.k141_1170026                      C 0 I 4
s Chinchilla_lanigera.JH722012.1                           1254166 1 +   2543920 t
i Chinchilla_lanigera.JH722012.1                         C 0 I 14
s Chiropotes_israelita.k141_747660                           99655 1 +    146308 A
i Chiropotes_israelita.k141_747660                       C 0 I 4
s Chiropotes_sagulatus.k141_1421488                          31463 1 -     50570 a
i Chiropotes_sagulatus.k141_1421488                      C 0 I 4
s Chlorocebus_aethiops.ctg25                              18431764 1 -  18827391 A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18270 1 -     50209 A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425269 1 + 135778131 a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1913770 1 +   2368649 a
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952019 1 + 200372422 A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40295 1 +     84244 A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549337 1 -  53390261 t
i Condylura_cristata.JH655891.1                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 51875 1 +     63868 T
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 8
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29802 1 -     87169 A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    838368 1 +   1526836 T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 17
s Delphinapterus_leucas.KZ290073.1                        16812730 1 +  35494412 a
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8631438 1 +  20541912 A
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37661 1 +     67921 T
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 10
s Elaphurus_davidianus.JRFZ01104969.1                       312211 1 +    607251 a
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          22379 1 -    110024 a
i Ellobius_lutescens.LOEQ01008920.1                      I 3 I 4
s Ellobius_talpinus.LOJH01081419.1                            2299 1 +      8657 a
i Ellobius_talpinus.LOJH01081419.1                       I 3 I 4
s Eptesicus_fuscus.JH977646.1                              2147045 1 -  14770903 a
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Erythrocebus_patas.Contig38                             21208437 1 -  21539334 A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12401 1 +    133382 A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             26354 1 -     44125 A
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20238257 1 + 206538554 a
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20197100 1 + 205367284 a
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 10854 1 -     36744 A
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             851680 1 +   3816255 c
i Fukomys_damarensis.KN121974.1                          C 0 I 12
s Galeopterus_variegatus.GalVar_scaffold_108840               2783 1 -      9135 A
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 I 14
s Giraffa_tippelskirchi.LVKQ01S007888.1                     610170 1 -    660261 a
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            32206 1 +     49224 T
i Glis_glis.GliGli_scaffold_19807                        C 0 I 13
s Gorilla_beringei.k141_3596273                              19271 1 -     32273 A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341407 1 + 186649187 a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33913 1 +     78134 T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 19
s Helogale_parvula.HelPar_flattened_line_2585               243641 1 +    327341 A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 19376 1 +     36099 A
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20663464 1 +  22651954 t
i Heterocephalus_glaber.JH602082.1                       C 0 I 14
s Hoolock_leuconedys.ctg274                                    438071 1 +    630532 A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46343 1 +     55795 A
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84351 1 +    135385 A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 14
s Ictidomys_tridecemlineatus.JH393364.1                    7522259 1 -   7955117 t
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 13
s Inia_geoffrensis.IniGeo_flattened_line_48101               23936 1 +     23964 A
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8278384 1 -   9596543 T
i Jaculus_jaculus.JH725527.1                             C 0 I 25
s Kogia_breviceps.KogBre_flattened_line_192630                3311 1 -      3359 A
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         15713 1 -     38430 a
i Lagothrix_lagothricha.k141_1005387                     C 0 I 3
s Lasiurus_borealis.LasBor_scaffold_32767                    17691 1 -     42476 A
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     8060 1 -     14121 T
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 13
s Lipotes_vexillifer.KE559953.1                             269000 1 -    662738 a
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1440399 1 +   1826925 A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                              10209 1 +     40492 A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679463 1 +  60120075 A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 15980 1 -     26193 A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            83756 1 -    114318 A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9447 1 -     23192 A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                18911 1 -     29190 A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27489 1 +     37952 A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842566 1 + 187317192 a
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461144 1 -  25927173 a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83345 1 +     89720 A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10338 1 +     20474 A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10135 1 -     14993 A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  332997 1 -    668171 A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8447 1 -     24072 a
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29078 1 -     45290 A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91974 1 +     94391 A
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23940666 1 -  24302211 A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354782 1 +    752769 A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              19556 1 +    737560 a
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              51574 1 -    317179 a
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33104542 1 -  40650429 t
i Marmota_marmota.CZRN01000018.1                         C 0 I 13
s Mesocricetus_auratus.KB708134.1                         12184079 1 -  29670104 A
i Mesocricetus_auratus.KB708134.1                        C 0 I 4
s Mesoplodon_bidens.MesBid_scaffold_108144                    4610 1 +     10310 A
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                17185 1 -     19307 C
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11262362 1 -  27267610 a
i Microtus_ochrogaster.CM001695.1                        C 0 I 4
s Miniopterus_natalensis.LDJU01000034.1                    1851592 1 +   8254450 a
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             35272 1 +     64694 A
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                          12346 1 -     28506 A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    28113 1 -    437263 A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142986 1 -    366855 A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   2234 1 +     82753 A
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           8139 1 +     14753 a
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84363008 1 - 120012414 T
i Mus_caroli.LT608237.1                                  C 0 I 5
s Mus_musculus.chr8                                       87652509 1 - 129401213 T
i Mus_musculus.chr8                                      C 0 I 5
s Mus_pahari.LT608297.1                                   31357243 1 -  89631738 t
i Mus_pahari.LT608297.1                                  C 0 I 5
s Mus_spretus.CM004101.1                                  90754998 1 - 130317789 T
i Mus_spretus.CM004101.1                                 C 0 I 5
s Myotis_brandtii.KE162005.1                                281775 1 -  10118263 T
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1589029 1 -   6019432 T
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3905129 1 -   4330536 t
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                        1281 1 +      1835 T
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 C 0
s Nannospalax_galili.KL204047.1                            2036804 1 -   3037898 T
i Nannospalax_galili.KL204047.1                          C 0 I 5
s Nasalis_larvatus.k141_413338                               18400 1 +     21681 A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5867082 1 +   7148211 a
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    759183 1 +    783361 A
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Ochotona_princeps.JH802162.1                             1365484 1 +   3988456 T
i Ochotona_princeps.JH802162.1                           C 0 I 15
s Okapia_johnstoni.LVCL01S0005463.1                          78086 1 -    150152 A
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   27020 1 +     28053 A
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 4
s Onychomys_torridus.OnyTor_scaffold_2986                    82022 1 +    102263 T
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 5
s Orcinus_orca.KB316932.1                                  2782993 1 -  10937097 a
i Orcinus_orca.KB316932.1                                C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67148961 1 + 174332312 T
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 13
s Ovis_aries.CM001607.2                                   17587349 1 +  44047080 a
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      175337 1 -    191736 A
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    47372 1 +     80009 a
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146242 1 + 189151597 a
i Pan_troglodytes.CM009242.2                             C 0 I 5
s Panthera_onca.PanOnc_flattened_line_3271                  152462 1 +    230217 A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                265671 1 +  18783137 a
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4722551 1 -   8748460 a
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1266242 1 -   2937107 a
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183446472 1 + 183742232 a
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10122 1 +     20448 A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20566930 1 +  20919399 A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   8862 1 +     41871 A
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12155 1 +     27711 A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3154 1 -     11374 A
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13962 1 -     78924 C
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18196649 1 -  18517816 t
i Peromyscus_maniculatus.KI615324.1                      C 0 I 5
s Petromus_typicus.PetTyp_scaffold_42190                     29394 1 -     29689 T
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 I 15
s Phocoena_phocoena.PhoPho_flattened_line_24159              10036 1 +     63832 A
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            1474 1 +     68526 A
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        41620 1 +     89929 A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43034 1 +     51399 A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299271 1 -  14605196 a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3065 1 +     22620 A
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pithecia_albicans.k141_1476471                              4917 1 +     26961 A
i Pithecia_albicans.k141_1476471                         C 0 I 4
s Pithecia_chrysocephala.k141_839575                          1062 1 +     23417 A
i Pithecia_chrysocephala.k141_839575                     C 0 I 4
s Pithecia_hirsuta.k141_305604                                4909 1 +     29694 A
i Pithecia_hirsuta.k141_305604                           C 0 I 4
s Pithecia_mittermeieri.k141_446740                          29935 1 +     52772 A
i Pithecia_mittermeieri.k141_446740                      C 0 I 4
s Pithecia_pissinattii.k141_1824269                           4931 1 +     26198 A
i Pithecia_pissinattii.k141_1824269                      C 0 I 4
s Pithecia_pithecia.tarseq_165                             3941479 1 +   4542175 A
i Pithecia_pithecia.tarseq_165                           C 0 I 4
s Pithecia_vanzolinii.k141_1697688                            4895 1 -     23490 a
i Pithecia_vanzolinii.k141_1697688                       C 0 I 4
s Plecturocebus_bernhardi.k141_2549090                        9151 1 -     39866 A
i Plecturocebus_bernhardi.k141_2549090                   C 0 I 4
s Plecturocebus_brunneus.k141_1495506                        18317 1 +     34906 A
i Plecturocebus_brunneus.k141_1495506                    C 0 I 4
s Plecturocebus_caligatus.k141_1382851                       22579 1 +     87950 A
i Plecturocebus_caligatus.k141_1382851                   C 0 I 4
s Plecturocebus_cinerascens.k141_1164729                     23408 1 +     88961 A
i Plecturocebus_cinerascens.k141_1164729                 C 0 I 4
s Plecturocebus_cupreus.k141_2351393                          9079 1 +     39403 A
i Plecturocebus_cupreus.k141_2351393                     C 0 I 4
s Plecturocebus_dubius.k141_1058799                          22860 1 -     87928 A
i Plecturocebus_dubius.k141_1058799                      C 0 I 4
s Plecturocebus_grovesi.k141_2013005                         29819 1 +     60166 A
i Plecturocebus_grovesi.k141_2013005                     C 0 I 4
s Plecturocebus_hoffmannsi.k141_3303950                      30016 1 +     67232 A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 I 4
s Plecturocebus_miltoni.k141_349282                          25489 1 +     90634 A
i Plecturocebus_miltoni.k141_349282                      C 0 I 4
s Plecturocebus_moloch.k141_1031110                          22861 1 -     89403 A
i Plecturocebus_moloch.k141_1031110                      C 0 I 4
s Pongo_abelii.CM009266.2                                189134388 1 + 189387572 a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9573997 1 +   9816681 A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76584 1 -     81375 A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8401 1 +     19060 A
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Pteronotus_parnellii.KE909381.1                            16467 1 -     21811 A
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteropus_alecto.KB030862.1                              22978067 1 +  28871421 N
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Puma_concolor.QAVW01001104.1                            20275621 1 -  38429054 a
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             18386 1 -     91421 A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612509 1 +   7812017 A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18416 1 -     72585 A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6828 1 +     55207 A
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinopithecus_bieti.k119_217274                            10084 1 -     11128 A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239452 1 - 195417433 a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675099 1 +   7961872 A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89157 1 -     96226 A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Semnopithecus_entellus.k141_1672505                         3258 1 -     12572 A
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30110 1 +     39453 A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           10618 1 +     27826 A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10154 1 -     19483 A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3457 1 -     12762 A
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3302 1 +     13763 A
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     2165 1 -     30804 T
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 I 5
s Sorex_araneus.JH798187.1                                13652302 1 -  18376816 C
i Sorex_araneus.JH798187.1                               I 1 C 0
s Spermophilus_dauricus.KZ294078.1                         1955405 1 -   3870691 t
i Spermophilus_dauricus.KZ294078.1                       C 0 I 13
s Suricata_suricatta.SurSur_flattened_line_6629              19636 1 -    196729 A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6812452 1 +  69701581 g
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                12147 1 +     41958 A
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tarsius_lariang.k141_2201908                               27084 1 +     70052 A
i Tarsius_lariang.k141_2201908                           C 0 I 4
s Tarsius_wallacei.k141_254427                                1881 1 -     16117 A
i Tarsius_wallacei.k141_254427                           C 0 I 4
s Theropithecus_gelada.CM009954.1                        186431778 1 + 186847797 a
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106692 1 +    114563 T
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 14
s Tonatia_saurophila.TonSau_scaffold_294                     82532 1 +    610378 A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         14203 1 -     20410 A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3319 1 -     12674 A
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14311 1 +     19930 A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      10706 1 -     19997 A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            50853 1 -     60166 A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18314 1 -     27529 A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                   10676 1 -     10723 A
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28176 1 +     32220 A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942273 1 +   6242583 A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11526 1 +     20839 A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    1145 1 +     27266 A
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tupaia_chinensis.KB320699.1                              2157294 1 +   4065304 t
i Tupaia_chinensis.KB320699.1                            C 0 I 24
s Tursiops_truncatus.MRVK01000835.1                       15739235 1 +  33153633 a
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54587 1 -     77625 A
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Vicugna_pacos.KN270157.1                                 5373294 1 -   5488506 a
i Vicugna_pacos.KN270157.1                               I 194 C 0
s Xerus_inauris.XerIna_scaffold_2302                          2408 1 +    224448 T
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 13
s Zapus_hudsonius.ZapHud_scaffold_11398                      16126 1 +     63895 T
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 14
e Ateles_paniscus.k141_457735                                21552 2 +     72325 I
e Ateles_marginatus.k141_803263                              13663 2 -     40414 I
e Ateles_geoffroyi_a.k141_833924                                9279 2 -     89868 I
e Ateles_chamek.k141_1806455                                 27507 2 -     30947 I
e Ateles_belzebuth.k141_445860                               44703 2 -     48001 I
e Ateles_geoffroyi_b.tarseq_1536                             21209907 2 -  21539123 I
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202 0 +      8798 C
e Galago_senegalensis.k141_631886                             7400 0 +     11339 C
e Galago_moholi.ctg2040                                     429710 0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964 2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445 0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734 0 -     33856 C
e Perodicticus_potto.k141_1186926                              597 0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219 0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 13420 1278 -     43706 T
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851728 0 -   5085361 C
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Trachypithecus_laotum.k141_907409                          11930 0 -     21137 C
e Trachypithecus_hatinhensis.k141_17719                         27 0 +      9229 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   7643 0 +      8208 C
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73921 0 +    116680 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             32343 0 +     97271 C
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    154481 0 -    313613 C
e Rhinolophus_sinicus.LVEH01000134.1                        368295 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53571770 803 +  90668790 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         41868 0 +     42204 C
e Psammomys_obesus.NESX01036370.1                            12264 4 -     21651 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Otocyon_megalotis.JAEUCK010005147.1                       465310 1613 -    559221 T
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odocoileus_virginianus.KZ100018.1                         145852 291 +    630418 I
e Odobenus_rosmarus.KB229312.1                              508010 0 -   2017862 C
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869 0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414 0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947 0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9150752 0 -   9404916 C
e Neomonachus_schauinslandi.NINY01007730.1                20308868 0 +  31847680 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190536 0 +    196477 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     72426 14 -     80779 I
e Mustela_putorius.JH418006.1                               303055 0 -  14710649 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398 7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7275 0 -      8324 C
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 34623 4 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365             11666 0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                        14651 0 -    207569 C
e Lycaon_pictus.CM007581.1                                17957954 0 -  59628241 C
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Leptonychotes_weddellii.KB714746.1                       3044407 0 +   3914936 C
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_101188                404 0 +      9903 C
e Hipposideros_armiger.JXIK01000431.1                       111834 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689 0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Enhydra_lutris.KZ291758.1                               16330954 0 -  41312741 C
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64769 0 +   2246927 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  37113 98 +     51376 I
e Crocidura_indochinensis.CroInd_scaffold_37019               4143 0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11668671 0 + 224834208 C
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           1799 0 +     23735 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1750 0 -      8501 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Capromys_pilorides.CapPil_scaffold_65020                    2241 13 -     12242 I
e Canis_lupus_orion.HG994398.1                            18503016 0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17961714 0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9037245 0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     2543 0 -     43241 C
e CanFam4.chr16                                           17801802 0 -  60362399 C
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538 0 +      5281 C
e Ailurus_fulgens.LNAC01001112.1                             81005 0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9511925 0 -  29979442 C

a score=0.000000
s hg38.chrUn_KI270753v1                                      10030  5 +     62944 T--------AT-A-----------T
s Allenopithecus_nigroviridis.k141_3361533                   17897  5 -     52922 T--------AT-A-----------T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         17832  5 -     28001 T--------AT-A-----------T
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8327  5 -     18505 T--------AT-A-----------T
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9180  5 -     12518 T--------AT-A-----------T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              9650  5 +     51355 T--------AT-A-----------T
i Alouatta_belzebul.k141_3560514                         I 4 C 0
s Alouatta_caraya.k141_1701091                                2755  5 -     36483 T--------AT-A-----------T
i Alouatta_caraya.k141_1701091                           I 4 I 5
s Alouatta_discolor.k141_566626                              13212  5 +     28687 T--------AT-A-----------T
i Alouatta_discolor.k141_566626                          I 4 C 0
s Alouatta_juara.k141_1302312                                 1680  5 +     27940 T--------AT-A-----------T
i Alouatta_juara.k141_1302312                            I 4 I 5
s Alouatta_macconnelli.k141_918386                            2762  5 -      9457 T--------AT-A-----------T
i Alouatta_macconnelli.k141_918386                       I 4 I 2
s Alouatta_nigerrima.k141_1929159                             1720  5 +     30492 T--------AT-A-----------T
i Alouatta_nigerrima.k141_1929159                        I 4 I 2
s Alouatta_palliata.k141_2135620                              5713  5 +     47717 T--------AT-A-----------T
i Alouatta_palliata.k141_2135620                         I 4 C 0
s Alouatta_puruensis.k141_362188                              2447  5 +      5663 T--------AT-A-----------T
i Alouatta_puruensis.k141_362188                         I 4 I 5
s Alouatta_seniculus.k141_117119                             16899  5 +     50774 T--------AT-A-----------T
i Alouatta_seniculus.k141_117119                         I 4 I 5
s Aplodontia_rufa.AprRuf_scaffold_68852                      13950  4 +     20879 ---------AT-A-----------T
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 14 I 7
s Ateles_geoffroyi_b.tarseq_1536                             21209909  5 -  21539123 t--------at-a-----------t
i Ateles_geoffroyi_b.tarseq_1536                            I 2 C 0
s Ateles_belzebuth.k141_445860                               44705  5 -     48001 t--------at-a-----------t
i Ateles_belzebuth.k141_445860                           I 2 C 0
s Ateles_chamek.k141_1806455                                 27509  5 -     30947 t--------at-a-----------t
i Ateles_chamek.k141_1806455                             I 2 C 0
s Ateles_geoffroyi_a.k141_833924                                9281  5 -     89868 t--------at-a-----------t
i Ateles_geoffroyi_a.k141_833924                           I 2 C 0
s Ateles_marginatus.k141_803263                              13665  5 -     40414 t--------at-a-----------t
i Ateles_marginatus.k141_803263                          I 2 C 0
s Ateles_paniscus.k141_457735                                21554  5 +     72325 T--------AT-A-----------T
i Ateles_paniscus.k141_457735                            I 2 C 0
s Cacajao_ayresi.k141_552049                                102531  5 -    122966 T--------AT-A-----------T
i Cacajao_ayresi.k141_552049                             I 4 C 0
s Cacajao_calvus.k141_5142                                   62036  5 +     81800 T--------AT-A-----------T
i Cacajao_calvus.k141_5142                               I 4 C 0
s Cacajao_hosomi.k141_81245                                  31216  5 -     95584 T--------AT-A-----------T
i Cacajao_hosomi.k141_81245                              I 4 C 0
s Cacajao_melanocephalus.k141_619699                         55317  5 -    119600 T--------AT-A-----------T
i Cacajao_melanocephalus.k141_619699                     I 4 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    2254  5 -     12242 C--------AC-A-----------G
i Capromys_pilorides.CapPil_scaffold_65020               I 13 I 5
s Carlito_syrichta.NW_007259797.1                           156596  5 -    496798 T--------AG-G-----------T
i Carlito_syrichta.NW_007259797.1                        I 4 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138593  2 +    179628 T--------A---------------
i Castor_canadensis.CasCan_scaffold_2074                 I 13 I 8
s Cephalopachus_bancanus.k141_1423433                         6094  5 +     31688 T--------AG-G-----------T
i Cephalopachus_bancanus.k141_1423433                    I 4 C 0
s Cercocebus_atys.KQ010504.1                               4478858  5 +   4669795 t--------at-a-----------t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3352  5 +     17872 T--------AT-A-----------T
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           3947  5 -     14043 T--------AT-A-----------T
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12042  5 +     27781 T--------AT-A-----------T
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12192  5 -     20310 T--------AT-A-----------T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15172  5 +     29689 T--------AT-A-----------T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            9928  5 -     20078 T--------AT-A-----------T
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          17843  5 -     27936 T--------AT-A-----------T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            6710  5 -     17152 T--------AT-A-----------T
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826442  5 +  39242232 T--------AT-A-----------T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21225946  5 -  21565898 T--------AT-A-----------T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43065  5 -     53127 T--------AT-A-----------T
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3315  5 +     13442 T--------AT-A-----------T
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       17861  5 -     27947 T--------AT-A-----------T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                          890  5 +     10558 T--------AT-A-----------T
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          3895  5 +     14005 T--------AT-A-----------T
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1139  5 -     17098 T--------AC-A-----------T
i Cheracebus_lucifer.k141_49986                          I 4 C 0
s Cheracebus_lugens.k141_1393925                              1015  5 +     17877 T--------AC-A-----------T
i Cheracebus_lugens.k141_1393925                         I 4 C 0
s Cheracebus_regulus.k141_471822                            158582  5 -    216457 T--------AC-A-----------T
i Cheracebus_regulus.k141_471822                         I 4 C 0
s Cheracebus_torquatus.k141_1170026                          63057  5 +     76511 T--------AC-A-----------T
i Cheracebus_torquatus.k141_1170026                      I 4 C 0
s Chinchilla_lanigera.JH722012.1                           1254181  5 +   2543920 t--------at-g-----------g
i Chinchilla_lanigera.JH722012.1                         I 14 I 5
s Chiropotes_israelita.k141_747660                           99660  5 +    146308 T--------AT-A-----------T
i Chiropotes_israelita.k141_747660                       I 4 C 0
s Chiropotes_sagulatus.k141_1421488                          31468  5 -     50570 t--------at-a-----------t
i Chiropotes_sagulatus.k141_1421488                      I 4 C 0
s Chlorocebus_aethiops.ctg25                              18431765  5 -  18827391 T--------AT-A-----------T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18271  5 -     50209 T--------AT-A-----------T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425270  5 + 135778131 t--------at-a-----------t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1913771  5 +   2368649 t--------at-a-----------t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_polykomos.k141_906115                              40296  5 +     84244 T--------AT-A-----------T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    838386  5 +   1526836 T--------GT-A-----------A
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 17 I 8
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37211  5 +     51376 T--------AC-A-----------G
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 98 I 5
s Dinomys_branickii.DinBra_scaffold_21862                    37672  4 +     67921 ---------AT-G-----------A
i Dinomys_branickii.DinBra_scaffold_21862                I 10 I 4
s Erythrocebus_patas.Contig38                             21208438  5 -  21539334 T--------AT-A-----------T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Fukomys_damarensis.KN121974.1                             851693  3 +   3816255 ----------T-G-----------G
i Fukomys_damarensis.KN121974.1                          I 12 I 5
s Galeopterus_variegatus.GalVar_scaffold_108840               2798 16 -      9135 T--------AT-AATTATACATTAT
i Galeopterus_variegatus.GalVar_scaffold_108840          I 14 I 8
s Glis_glis.GliGli_scaffold_19807                            32220 10 +     49224 T---ATAATAT-G-----------T
i Glis_glis.GliGli_scaffold_19807                        I 13 I 9
s Gorilla_beringei.k141_3596273                              19272  5 -     32273 T--------AT-A-----------T
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341408  5 + 186649187 t--------at-a-----------t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20663479  5 +  22651954 t--------at-g-----------g
i Heterocephalus_glaber.JH602082.1                       I 14 I 5
s Hoolock_leuconedys.ctg274                                    438072  3 +    630532 T--------AT--------------
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84366  5 +    135385 T--------AG-G-----------G
i Hystrix_cristata.HysCri_scaffold_5660                  I 14 I 9
s Ictidomys_tridecemlineatus.JH393364.1                    7522273 13 -   7955117 ttagatatcat-a-----------c
i Ictidomys_tridecemlineatus.JH393364.1                  I 13 I 7
s Jaculus_jaculus.JH725527.1                               8278410  5 -   9596543 t--------at-a-----------t
i Jaculus_jaculus.JH725527.1                             I 25 C 0
s Lagothrix_lagothricha.k141_1005387                         15717  3 -     38430 ----------t-a-----------c
i Lagothrix_lagothricha.k141_1005387                     I 3 C 0
s Lepus_americanus.LepAme_scaffold_107385                     8074  5 -     14121 T--------GT-G-----------G
i Lepus_americanus.LepAme_scaffold_107385                I 13 I 8
s Lophocebus_aterrimus.ctg367                              1440400  5 +   1826925 T--------AT-A-----------T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                              10210  5 +     40492 T--------AT-A-----------T
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679464  5 +  60120075 T--------AT-A-----------T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 15981  5 -     26193 T--------AT-A-----------T
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            83757  5 -    114318 T--------AT-A-----------T
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9448  5 -     23192 T--------AT-A-----------T
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                18912  5 -     29190 T--------AT-A-----------T
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27490  5 +     37952 T--------AT-A-----------T
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842567  5 + 187317192 t--------at-a-----------t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461145  5 -  25927173 t--------at-a-----------t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83346  5 +     89720 T--------AT-A-----------T
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10339  5 +     20474 C--------AT-A-----------T
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10136  5 -     14993 T--------AT-A-----------T
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  332998  5 -    668171 T--------AT-A-----------T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8448  5 -     24072 t--------at-a-----------t
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29079  5 -     45290 T--------AT-A-----------T
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23940667  5 -  24302211 T--------AT-A-----------T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354783  5 +    752769 T--------AT-A-----------T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33104556 13 -  40650429 ttagatatcat-a-----------c
i Marmota_marmota.CZRN01000018.1                         I 13 I 6
s Miopithecus_ogouensis.k141_534055                          12347  5 -     28506 T--------AT-A-----------T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     72440  5 -     80779 T--------AT-A-----------T
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 14 I 5
s Nasalis_larvatus.k141_413338                               18401  5 +     21681 T--------AT-A-----------T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Ochotona_princeps.JH802162.1                             1365500  5 +   3988456 T--------GT-G-----------G
i Ochotona_princeps.JH802162.1                           I 15 I 9
s Oryctolagus_cuniculus.CM000791.1                        67148975  5 + 174332312 T--------GT-G-----------G
i Oryctolagus_cuniculus.CM000791.1                       I 13 I 8
s Pan_paniscus.KQ411613.1                                    47373  5 +     80009 t--------at-a-----------t
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03002948.1                             23312  6 +     28717 T--------atta-----------t
i Pan_troglodytes.NBAG03002948.1                         I 2045 I 596
s Papio_anubis.CM001495.2                                183446473  5 + 183742232 t--------at-a-----------t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10123  5 +     20448 T--------AT-A-----------T
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20566931  5 +  20919399 T--------AT-A-----------T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   8863  5 +     41871 T--------AT-A-----------T
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12156  5 +     27711 T--------AT-A-----------T
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3155  5 -     11374 T--------AT-A-----------T
i Papio_ursinus.k141_5274964                             C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     29410  5 -     29689 C--------AT-G-----------G
i Petromus_typicus.PetTyp_scaffold_42190                 I 15 I 5
s Pithecia_albicans.k141_1476471                              4922  5 +     26961 T--------AT-A-----------T
i Pithecia_albicans.k141_1476471                         I 4 C 0
s Pithecia_chrysocephala.k141_839575                          1067  5 +     23417 T--------AT-A-----------T
i Pithecia_chrysocephala.k141_839575                     I 4 C 0
s Pithecia_hirsuta.k141_305604                                4914  5 +     29694 T--------AT-A-----------T
i Pithecia_hirsuta.k141_305604                           I 4 C 0
s Pithecia_mittermeieri.k141_446740                          29940  5 +     52772 T--------AT-A-----------T
i Pithecia_mittermeieri.k141_446740                      I 4 C 0
s Pithecia_pissinattii.k141_1824269                           4936  5 +     26198 T--------AT-A-----------T
i Pithecia_pissinattii.k141_1824269                      I 4 C 0
s Pithecia_pithecia.tarseq_165                             3941484  5 +   4542175 T--------AT-A-----------T
i Pithecia_pithecia.tarseq_165                           I 4 C 0
s Pithecia_vanzolinii.k141_1697688                            4900  5 -     23490 t--------at-a-----------t
i Pithecia_vanzolinii.k141_1697688                       I 4 C 0
s Plecturocebus_bernhardi.k141_2549090                        9156  5 -     39866 C--------AC-A-----------T
i Plecturocebus_bernhardi.k141_2549090                   I 4 C 0
s Plecturocebus_brunneus.k141_1495506                        18322  5 +     34906 C--------AC-A-----------T
i Plecturocebus_brunneus.k141_1495506                    I 4 C 0
s Plecturocebus_caligatus.k141_1382851                       22584  5 +     87950 C--------AC-A-----------T
i Plecturocebus_caligatus.k141_1382851                   I 4 C 0
s Plecturocebus_cinerascens.k141_1164729                     23413  5 +     88961 C--------AC-A-----------T
i Plecturocebus_cinerascens.k141_1164729                 I 4 C 0
s Plecturocebus_cupreus.k141_2351393                          9084  5 +     39403 C--------AC-A-----------T
i Plecturocebus_cupreus.k141_2351393                     I 4 C 0
s Plecturocebus_dubius.k141_1058799                          22865  5 -     87928 C--------AC-A-----------T
i Plecturocebus_dubius.k141_1058799                      I 4 C 0
s Plecturocebus_grovesi.k141_2013005                         29824  5 +     60166 C--------AC-A-----------T
i Plecturocebus_grovesi.k141_2013005                     I 4 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30021  5 +     67232 C--------AC-A-----------T
i Plecturocebus_hoffmannsi.k141_3303950                  I 4 C 0
s Plecturocebus_miltoni.k141_349282                          25494  5 +     90634 C--------AC-A-----------T
i Plecturocebus_miltoni.k141_349282                      I 4 C 0
s Plecturocebus_moloch.k141_1031110                          22866  5 -     89403 C--------AC-A-----------T
i Plecturocebus_moloch.k141_1031110                      I 4 C 0
s Pongo_abelii.CM009266.2                                189134389  5 + 189387572 t--------at-a-----------t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9573998  5 +   9816681 T--------AT-A-----------T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76585  5 -     81375 T--------AT-A-----------T
i Presbytis_comata.k141_677006                           C 0 I 2
s Presbytis_mitrata.k141_1087752                              8402  5 +     19060 T--------AT-A-----------T
i Presbytis_mitrata.k141_1087752                         C 0 I 2
s Pygathrix_cinerea.k141_1153803                             18387  5 -     91421 T--------AT-A-----------T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612510  5 +   7812017 T--------AT-A-----------T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18417  5 -     72585 T--------AT-A-----------T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                            10085  5 -     11128 T--------AT-A-----------T
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239453  5 - 195417433 t--------at-a-----------t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675100  5 +   7961872 T--------AT-A-----------T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Semnopithecus_entellus.k141_1672505                         3259  5 -     12572 T--------AT-A-----------T
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30111  5 +     39453 T--------AT-A-----------T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           10619  5 +     27826 T--------AT-A-----------T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10155  5 -     19483 T--------AT-A-----------T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3458  5 -     12762 T--------AT-A-----------T
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3303  5 +     13763 T--------AT-A-----------T
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1955419 13 -   3870691 ttagatatcat-a-----------c
i Spermophilus_dauricus.KZ294078.1                       I 13 I 7
s Tarsius_lariang.k141_2201908                               27089  5 +     70052 T--------AG-G-----------T
i Tarsius_lariang.k141_2201908                           I 4 C 0
s Tarsius_wallacei.k141_254427                                1886  5 -     16117 T--------AG-G-----------T
i Tarsius_wallacei.k141_254427                           I 4 C 0
s Theropithecus_gelada.CM009954.1                        186431779  5 + 186847797 t--------at-a-----------t
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106707  5 +    114563 C--------AT-G-----------G
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 14 I 5
s Trachypithecus_auratus.k141_722599                         14204  5 -     20410 T--------AT-A-----------T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3320  5 -     12674 T--------AT-A-----------T
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14312  5 +     19930 T--------AT-A-----------T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      10707  5 -     19997 T--------AT-A-----------T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_germaini.k141_912491                        18315  5 -     27529 T--------AT-A-----------T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                   10677  5 -     10723 T--------AT-A-----------T
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28177  5 +     32220 T--------AT-A-----------T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942274  5 +   6242583 T--------AT-A-----------T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11527  5 +     20839 T--------AT-A-----------T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2157319  5 +   4065304 T--------AT-A-----------T
i Tupaia_chinensis.KB320699.1                            I 24 I 8
s Xerus_inauris.XerIna_scaffold_2302                          2422  9 +    224448 T----TAGCAT-A-----------C
i Xerus_inauris.XerIna_scaffold_2302                     I 13 I 7
s Zapus_hudsonius.ZapHud_scaffold_11398                      16141  5 +     63895 T--------AC-A-----------T
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 14 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Mus_pahari.LT608297.1                                   31357244  5 -  89631738 I
e Mus_spretus.CM004101.1                                  90754999  5 - 130317789 I
e Mus_musculus.chr8                                       87652510  5 - 129401213 I
e Mus_caroli.LT608237.1                                   84363009  5 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 13420 1278 -     43706 T
e Vicugna_pacos.KN270157.1                                 5373295  0 -   5488506 C
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851728  0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   54588  0 -     77625 C
e Tursiops_truncatus.MRVK01000835.1                       15739236  0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_40725                    1146  0 +     27266 C
e Trachypithecus_laotum.k141_907409                          11930  0 -     21137 C
e Trachypithecus_hatinhensis.k141_17719                         27  0 +      9229 C
e Trachypithecus_geei.k141_277701                            50854  0 -     60166 C
e Tonatia_saurophila.TonSau_scaffold_294                     82533  0 +    610378 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   7643  0 +      8208 C
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73921  0 +    116680 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                12148  0 +     41958 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6812453  0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629              19637  0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             32343  0 +     97271 C
e Sorex_araneus.JH798187.1                                13652303  0 -  18376816 C
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_42075                     2166  5 -     30804 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    154481  0 -    313613 C
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                89158  0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        368295  0 -   3329780 C
e Rattus_norvegicus.chr16                                 53571770 803 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  6829  0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20275622  0 -  38429054 C
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Pteropus_alecto.KB030862.1                              22978068  0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         41868  0 +     42204 C
e Pteronotus_parnellii.KE909381.1                            16468  0 -     21811 C
e Psammomys_obesus.NESX01036370.1                            12264  4 -     21651 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             3066  0 +     22620 C
e Piliocolobus_tephrosceles.PDMG02000141.1                14299272  0 -  14605196 C
e Piliocolobus_kirkii.k141_448987                            43035  0 +     51399 C
e Piliocolobus_gordonorum.k141_381342                        41621  0 +     89929 C
e Piliocolobus_badius.k141_1142974                            1475  0 +     68526 C
e Phocoena_phocoena.PhoPho_flattened_line_24159              10037  0 +     63832 C
e Peromyscus_maniculatus.KI615324.1                       18196650  5 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13963  0 -     78924 C
e Pantholops_hodgsonii.KE114653.1                          1266243  0 -   2937107 C
e Panthera_tigris.KE722367.1                               4722552  0 -   8748460 C
e Panthera_pardus.KV860321.1                                265672  0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  152463  0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      175338  0 -    191736 C
e Ovis_aries.CM001607.2                                   17587350  0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       465310 1613 -    559221 T
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Orcinus_orca.KB316932.1                                  2782994  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    82023  5 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   27021  4 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          78087  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145852 291 +    630418 I
e Odobenus_rosmarus.KB229312.1                              508010  0 -   2017862 C
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9150752  0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    759184  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5867083  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20308868  0 +  31847680 C
e Nannospalax_galili.KL204047.1                            2036805  5 -   3037898 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190536  0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_281845                        1282  0 +      1835 C
e Myotis_lucifugus.GL429869.1                              3905130  0 -   4330536 C
e Myotis_davidii.KB100139.1                                1589030  0 -   6019432 C
e Myotis_brandtii.KE162005.1                                281776  0 -  10118263 C
e Mustela_putorius.JH418006.1                               303055  0 -  14710649 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           8140  0 +     14753 C
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   2235  0 +     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 142987  0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    28114  0 -    437263 C
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7275  0 -      8324 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             35273  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1851593  0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11262363  4 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                17186  0 -     19307 C
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    4611  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12184080  4 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 34623  4 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365             11666  0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                        14651  0 -    207569 C
e Manis_pentadactyla.KN006162.1                              51575  0 -    317179 C
e Manis_javanica.JSZB01003497.1                              19557  0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 91975  0 +     94391 C
e Lycaon_pictus.CM007581.1                                17957954  0 -  59628241 C
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             269001  0 -    662738 C
e Leptonychotes_weddellii.KB714746.1                       3044407  0 +   3914936 C
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Lasiurus_borealis.LasBor_scaffold_32767                    17692  0 -     42476 C
e Kogia_breviceps.KogBre_flattened_line_192630                3312  0 -      3359 C
e Inia_geoffrensis.IniGeo_flattened_line_48101               23937  0 +     23964 C
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  46344  0 +     55795 C
e Hipposideros_galeritus.HipGal_scaffold_101188                404  0 +      9903 C
e Hipposideros_armiger.JXIK01000431.1                       111834  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 19377  0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               243642  0 +    327341 C
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Graphiurus_murinus.GraMur_scaffold_10447                   33914 19 +     78134 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     610171  0 -    660261 C
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Felis_nigripes.FelNig_flattened_line_20823                 10855  0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20197101  0 + 205367284 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Eubalaena_japonica.EubJap_flattened_line_31514             26355  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           12402  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2147046  0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16330954  0 -  41312741 C
e Ellobius_talpinus.LOJH01081419.1                            2300  4 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          22380  4 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       312212  0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8631439  0 +  20541912 C
e Delphinapterus_leucas.KZ290073.1                        16812731  0 +  35494412 C
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64769  0 +   2246927 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             29803  0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_37019               4143  0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_18520                 51876  8 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           1799  0 +     23735 C
e Condylura_cristata.JH655891.1                           17549338  0 -  53390261 C
e Colobus_guereza.LG01                                   199952020  0 + 200372422 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1750  0 -      8501 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     94889  0 +    217609 C
e Carollia_perspicillata.CarPer_scaffold_92756                6437  0 -     11696 C
e Capra_hircus.CM004588.1                                 18061887  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18831167  0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18503016  0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17961714  0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9037245  0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     2543  0 -     43241 C
e CanFam4.chr16                                           17801802  0 -  60362399 C
e Camelus_ferus.KB017975.1                                  404544  0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2336246  0 -   7040546 C
e Camelus_bactrianus.KN276810.1                           10003774  0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2820570 632 +   4408762 I
e Bos_taurus.CM000203.6                                   18084890 633 +  45695690 I
e Bos_mutus.JH880303.1                                     1126816 621 -   1948126 I
e Bos_indicus.CM003047.1                                  20274252 633 +  48749331 I
e Bison_bison.KN261452.1                                    201071 631 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    28140  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         3555  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15193090  0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6095  0 +     43469 C
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Antilocapra_americana.AntAmePen_scaffold_12469             99537  0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      186689  0 +    412891 C
e Ammotragus_lervia.NIVO01071767.1                          677053  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     75684  4 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             81005  0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9511925  0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     72614  5 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           828615  0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                      10035 2 +     62944 T-A
s Acinonyx_jubatus.LLWD01001279.1                           828615 2 -   1699592 t-a
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511925 2 -  29979442 t-a
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             81005 2 -    347723 t-g
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   17902 2 -     52922 T-A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         17837 2 -     28001 T-A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8332 2 -     18505 T-A
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9185 2 -     12518 T-A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              9655 2 +     51355 T-A
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_discolor.k141_566626                              13217 2 +     28687 T-A
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_palliata.k141_2135620                              5718 2 +     47717 T-A
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          677053 2 -   2318259 a-a
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      186689 2 +    412891 T-A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             99537 1 -    100397 --A
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13961 1 +     20879 T--
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 7 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6095 2 +     43469 G-A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21209914 2 -  21539123 t-g
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               44710 2 -     48001 t-g
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 27514 2 -     30947 t-g
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9286 2 -     89868 t-g
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              13670 2 -     40414 t-g
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                21559 2 +     72325 T-G
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193090 2 +  23207421 t-a
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         3555 2 -     18090 t-a
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    28140 2 +     34529 A-A
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Cacajao_ayresi.k141_552049                                102536 2 -    122966 G-G
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   62041 2 +     81800 G-G
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31221 2 -     95584 G-G
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55322 2 -    119600 G-G
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10003774 2 -  17673402 t-a
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2336246 2 -   7040546 t-a
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  404544 2 -   1652518 t-a
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17801802 2 -  60362399 t-a
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     2543 2 -     43241 t-a
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9037245 2 -   9314153 t-a
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17961714 2 -  59632846 t-a
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18503016 2 +  63665305 t-a
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18831167 2 +  46296322 a-a
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18061887 2 -  44709034 a-a
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    2264 2 -     12242 T-A
i Capromys_pilorides.CapPil_scaffold_65020               I 5 C 0
s Carlito_syrichta.NW_007259797.1                           156601 2 -    496798 T-A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6437 2 -     11696 G-A
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138603 2 +    179628 T-G
i Castor_canadensis.CasCan_scaffold_2074                 I 8 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     94889 2 +    217609 T-A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         6099 2 +     31688 T-A
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4478863 2 +   4669795 t-a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3357 2 +     17872 T-A
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           3952 2 -     14043 T-A
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12047 2 +     27781 T-A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12197 2 -     20310 T-A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15177 2 +     29689 T-A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            9933 2 -     20078 T-A
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          17848 2 -     27936 T-A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            6715 2 -     17152 T-A
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826447 2 +  39242232 T-A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21225951 2 -  21565898 T-A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43070 2 -     53127 T-A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3320 2 +     13442 T-A
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       17866 2 -     27947 T-A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                          895 2 +     10558 T-A
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          3900 2 +     14005 T-A
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1144 2 -     17098 T-G
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1020 2 +     17877 T-G
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            158587 2 -    216457 T-G
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63062 2 +     76511 T-G
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254191 2 +   2543920 t-a
i Chinchilla_lanigera.JH722012.1                         I 5 C 0
s Chiropotes_israelita.k141_747660                           99665 2 +    146308 G-G
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          31473 2 -     50570 g-g
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18431770 2 -  18827391 T-A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425275 2 + 135778131 t-a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1913776 2 +   2368649 t-a
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952020 2 + 200372422 T-A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40301 2 +     84244 T-A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549338 2 -  53390261 t-a
i Condylura_cristata.JH655891.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29803 2 -     87169 T-A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    838399 2 +   1526836 C-A
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 8 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37221 2 +     51376 T-A
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 5 C 0
s Delphinapterus_leucas.KZ290073.1                        16812731 2 +  35494412 t-a
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8631439 2 +  20541912 T-A
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       312212 2 +    607251 a-a
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Enhydra_lutris.KZ291758.1                               16330954 2 -  41312741 t-a
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2147046 2 -  14770903 g-a
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Erythrocebus_patas.Contig38                             21208443 2 -  21539334 T-A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12402 2 +    133382 T-A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             26355 2 -     44125 T-A
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20238258 2 + 206538554 t-a
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20197101 2 + 205367284 t-a
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 10855 2 -     36744 T-A
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             851701 2 +   3816255 T-A
i Fukomys_damarensis.KN121974.1                          I 5 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               2822 2 -      9135 T-A
i Galeopterus_variegatus.GalVar_scaffold_108840          I 8 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     610171 2 -    660261 a-a
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            32239 2 +     49224 C-A
i Glis_glis.GliGli_scaffold_19807                        I 9 C 0
s Gorilla_beringei.k141_3596273                              19277 2 -     32273 T-A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341413 2 + 186649187 t-a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33933 2 +     78134 C-A
i Graphiurus_murinus.GraMur_scaffold_10447               I 19 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243642 2 +    327341 T-A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 19377 1 +     36099 A--
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20663489 2 +  22651954 t-a
i Heterocephalus_glaber.JH602082.1                       I 5 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46344 2 +     55795 T-A
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84380 2 +    135385 T-A
i Hystrix_cristata.HysCri_scaffold_5660                  I 9 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7522293 2 -   7955117 t-a
i Ictidomys_tridecemlineatus.JH393364.1                  I 7 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               23937 2 +     23964 T-A
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8278415 3 -   9596543 cta
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                3312 2 -      3359 T-A
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         15720 2 -     38430 t-a
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    17692 2 -     42476 C-A
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3044407 2 +   3914936 t-a
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     8087 2 -     14121 T-A
i Lepus_americanus.LepAme_scaffold_107385                I 8 C 0
s Lophocebus_aterrimus.ctg367                              1440405 2 +   1826925 T-A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17957954 2 -  59628241 t-a
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                              10215 2 +     40492 T-A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679469 2 +  60120075 T-A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 15986 2 -     26193 T-A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            83762 2 -    114318 T-A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9453 2 -     23192 T-A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                18917 2 -     29190 T-A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27495 2 +     37952 T-A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842572 2 + 187317192 t-a
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461150 2 -  25927173 t-a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83351 2 +     89720 T-A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10344 2 +     20474 T-A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10141 2 -     14993 T-A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333003 2 -    668171 T-A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8453 2 -     24072 t-a
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29084 2 -     45290 T-A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91975 2 +     94391 T-A
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23940672 2 -  24302211 T-A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354788 2 +    752769 T-A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              19557 2 +    737560 a-a
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              51575 2 -    317179 a-a
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33104575 2 -  40650429 t-g
i Marmota_marmota.CZRN01000018.1                         I 6 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             11666 2 +     13704 t-a
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    4611 2 +     10310 T-A
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                17186 2 -     19307 T-A
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1851593 2 +   8254450 t-a
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             35273 2 +     64694 T-A
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                          12352 2 -     28506 T-A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         7275 2 -      8324 t-a
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    28114 2 -    437263 T-A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142987 2 -    366855 T-A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   2235 2 +     82753 A-A
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           8140 2 +     14753 a-a
i Murina_feae.MurFea_scaffold_85699                      C 0 I 4
s Mustela_putorius.JH418006.1                               303055 2 -  14710649 t-a
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     72450 2 -     80779 T-A
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 5 C 0
s Myotis_brandtii.KE162005.1                                281776 2 -  10118263 A-A
i Myotis_brandtii.KE162005.1                             C 0 I 4
s Myotis_davidii.KB100139.1                                1589030 2 -   6019432 A-A
i Myotis_davidii.KB100139.1                              C 0 I 4
s Myotis_lucifugus.GL429869.1                              3905130 2 -   4330536 a-a
i Myotis_lucifugus.GL429869.1                            C 0 I 6
s Myotis_myotis.MyoMyo_scaffold_281845                        1282 2 +      1835 A-A
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 I 4
s Nasalis_larvatus.k141_413338                               18406 2 +     21681 T-A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308868 2 +  31847680 t-a
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5867083 2 +   7148211 t-a
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    759184 2 +    783361 T-A
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150752 2 -   9404916 t-a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 1134
s Ochotona_princeps.JH802162.1                             1365514 2 +   3988456 T-A
i Ochotona_princeps.JH802162.1                           I 9 C 0
s Odobenus_rosmarus.KB229312.1                              508010 2 -   2017862 t-a
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          78087 2 -    150152 A-A
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  2782994 2 -  10937097 t-a
i Orcinus_orca.KB316932.1                                C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67148988 2 + 174332312 t-a
i Oryctolagus_cuniculus.CM000791.1                       I 8 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       463697 2 -    559221 t-a
i Otocyon_megalotis.JAEUCK010005147.1                    T 1613 I 1613
s Ovis_aries.CM001607.2                                   17587350 2 +  44047080 a-a
i Ovis_aries.CM001607.2                                  C 0 I 2
s Ovis_canadensis.OviCan_scaffold_2572                      175338 2 -    191736 A-A
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    47378 2 +     80009 t-a
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146248 2 + 189151597 t-a
i Pan_troglodytes.CM009242.2                             I 5 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152463 2 +    230217 T-A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                265672 2 +  18783137 t-a
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4722552 2 -   8748460 t-a
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1266243 2 -   2937107 a-a
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183446478 2 + 183742232 t-a
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10128 2 +     20448 T-A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20566936 2 +  20919399 T-A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   8868 2 +     41871 T-A
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12161 2 +     27711 T-A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3160 2 -     11374 T-A
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13963 2 -     78924 T-A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     29420 1 -     29689 T--
i Petromus_typicus.PetTyp_scaffold_42190                 I 5 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              10037 2 +     63832 T-A
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            1475 2 +     68526 T-A
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        41621 2 +     89929 T-A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43035 2 +     51399 T-A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299272 2 -  14605196 t-a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3066 2 +     22620 C-A
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pithecia_albicans.k141_1476471                              4927 2 +     26961 T-G
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1072 2 +     23417 T-G
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                4919 2 +     29694 T-G
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          29945 2 +     52772 T-G
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           4941 2 +     26198 T-G
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3941489 2 +   4542175 T-G
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            4905 2 -     23490 t-g
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9161 2 -     39866 T-G
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18327 2 +     34906 T-G
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       22589 2 +     87950 T-G
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23418 2 +     88961 T-G
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9089 2 +     39403 T-G
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          22870 2 -     87928 T-G
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         29829 2 +     60166 T-G
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30026 2 +     67232 T-G
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          25499 2 +     90634 T-G
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          22871 2 -     89403 T-G
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189134394 2 + 189387572 t-a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9574003 2 +   9816681 T-A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Pteronotus_parnellii.KE909381.1                            16468 2 -     21811 c-a
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41868 2 +     42204 T-A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22978068 2 +  28871421 N-N
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Puma_concolor.QAVW01001104.1                            20275622 2 -  38429054 t-a
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             18392 2 -     91421 T-A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612515 2 +   7812017 T-A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18422 2 -     72585 T-A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6829 2 +     55207 A-A
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinopithecus_bieti.k119_217274                            10090 2 -     11128 T-A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239458 2 - 195417433 t-a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675105 2 +   7961872 T-A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89158 2 -     96226 T-A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154481 2 -    313613 T-A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                         3264 2 -     12572 T-A
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30116 2 +     39453 T-A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           10624 2 +     27826 T-A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10160 2 -     19483 T-A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3463 2 -     12762 T-A
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3308 2 +     13763 T-A
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sorex_araneus.JH798187.1                                13652303 2 -  18376816 T-T
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1955439 2 -   3870691 t-a
i Spermophilus_dauricus.KZ294078.1                       I 7 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             32343 2 +     97271 t-a
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              19637 2 -    196729 T-A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6812453 2 +  69701581 t-a
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                12148 2 +     41958 T-G
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tarsius_lariang.k141_2201908                               27094 2 +     70052 T-A
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1891 2 -     16117 T-A
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186431784 2 + 186847797 t-a
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106717 1 +    114563 T--
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 5 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     82533 2 +    610378 G-A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         14209 2 -     20410 T-A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3325 2 -     12674 T-A
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14317 2 +     19930 T-A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      10712 2 -     19997 T-A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            50854 2 -     60166 T-A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18320 2 -     27529 T-A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                   10682 2 -     10723 T-A
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28182 2 +     32220 T-A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942279 2 +   6242583 T-A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11532 2 +     20839 T-A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    1146 2 +     27266 T-A
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tupaia_chinensis.KB320699.1                              2157332 2 +   4065304 C-A
i Tupaia_chinensis.KB320699.1                            I 8 C 0
s Tursiops_truncatus.MRVK01000835.1                       15739236 2 +  33153633 t-a
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54588 2 -     77625 T-G
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4851728 2 -   5085361 t-a
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                 5373295 2 -   5488506 t-a
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 12142 2 -     43706 T-A
i Vulpes_lagopus.VulLag_flattened_line_30954             T 1278 I 1278
s Xerus_inauris.XerIna_scaffold_2302                          2438 2 +    224448 T-A
i Xerus_inauris.XerIna_scaffold_2302                     I 7 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      16146 3 +     63895 CTA
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202 0 +      8798 C
e Galago_senegalensis.k141_631886                             7400 0 +     11339 C
e Galago_moholi.ctg2040                                     429710 0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964 2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Alouatta_seniculus.k141_117119                             16904 5 +     50774 I
e Alouatta_puruensis.k141_362188                              2452 5 +      5663 I
e Alouatta_nigerrima.k141_1929159                             1725 2 +     30492 I
e Alouatta_macconnelli.k141_918386                            2767 2 -      9457 I
e Alouatta_juara.k141_1302312                                 1685 5 +     27940 I
e Alouatta_caraya.k141_1701091                                2760 5 -     36483 I
e Mus_pahari.LT608297.1                                   31357244 5 -  89631738 I
e Mus_spretus.CM004101.1                                  90754999 5 - 130317789 I
e Mus_musculus.chr8                                       87652510 5 - 129401213 I
e Mus_caroli.LT608237.1                                   84363009 5 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445 0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734 0 -     33856 C
e Perodicticus_potto.k141_1186926                              597 0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219 0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Trachypithecus_laotum.k141_907409                          11930 0 -     21137 C
e Trachypithecus_hatinhensis.k141_17719                         27 0 +      9229 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   7643 0 +      8208 C
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73921 0 +    116680 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_42075                     2166 5 -     30804 I
e Rhinolophus_sinicus.LVEH01000134.1                        368295 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53571770 803 +  90668790 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Psammomys_obesus.NESX01036370.1                            12264 4 -     21651 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Presbytis_mitrata.k141_1087752                              8407 2 +     19060 I
e Presbytis_comata.k141_677006                               76590 2 -     81375 I
e Peromyscus_maniculatus.KI615324.1                       18196650 5 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Onychomys_torridus.OnyTor_scaffold_2986                    82023 5 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   27021 4 +     28053 I
e Odocoileus_virginianus.KZ100018.1                         145852 291 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869 0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414 0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947 0 - 196305487 C
e Nannospalax_galili.KL204047.1                            2036805 5 -   3037898 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190536 0 +    196477 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398 7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Microtus_ochrogaster.CM001695.1                         11262363 4 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184080 4 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 34623 4 +    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                        14651 0 -    207569 C
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             269001 0 -    662738 C
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hoolock_leuconedys.ctg274                                    438075 0 +    630532 C
e Hipposideros_galeritus.HipGal_scaffold_101188                404 0 +      9903 C
e Hipposideros_armiger.JXIK01000431.1                       111834 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689 0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Ellobius_talpinus.LOJH01081419.1                            2300 4 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          22380 4 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    37676 4 +     67921 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64769 0 +   2246927 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Crocidura_indochinensis.CroInd_scaffold_37019               4143 0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11668671 0 + 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_18520                 51876 8 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           1799 0 +     23735 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chlorocebus_pygerythrus.k141_1025673                       18276 0 -     50209 C
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1750 0 -      8501 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Bubalus_bubalis.KI419123.1                               2820570 632 +   4408762 I
e Bos_taurus.CM000203.6                                   18084890 633 +  45695690 I
e Bos_mutus.JH880303.1                                     1126816 621 -   1948126 I
e Bos_indicus.CM003047.1                                  20274252 633 +  48749331 I
e Bison_bison.KN261452.1                                    201071 631 -    288883 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538 0 +      5281 C
e Allactaga_bullata.AllBul_scaffold_9566                     75684 4 -     89534 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     72614 5 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      10037 1 +     62944 T
s Acinonyx_jubatus.LLWD01001279.1                           828617 1 -   1699592 t
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 2
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511927 1 -  29979442 t
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 11
s Ailurus_fulgens.LNAC01001112.1                             81007 1 -    347723 t
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 11
s Allenopithecus_nigroviridis.k141_3361533                   17904 1 -     52922 T
i Allenopithecus_nigroviridis.k141_3361533               C 0 I 2
s Allochrocebus_lhoesti.k141_4309873                         17839 1 -     28001 T
i Allochrocebus_lhoesti.k141_4309873                     C 0 I 2
s Allochrocebus_preussi.k141_1442296                          8334 1 -     18505 T
i Allochrocebus_preussi.k141_1442296                     C 0 I 2
s Allochrocebus_solatus.k141_166128                           9187 1 -     12518 T
i Allochrocebus_solatus.k141_166128                      C 0 I 2
s Alouatta_belzebul.k141_3560514                              9657 1 +     51355 T
i Alouatta_belzebul.k141_3560514                         C 0 I 2
s Alouatta_discolor.k141_566626                              13219 1 +     28687 T
i Alouatta_discolor.k141_566626                          C 0 I 2
s Alouatta_palliata.k141_2135620                              5720 1 +     47717 T
i Alouatta_palliata.k141_2135620                         C 0 I 2
s Ammotragus_lervia.NIVO01071767.1                          677055 1 -   2318259 a
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 2
s Anoura_caudifer.AnoCau_scaffold_1412                      186691 1 +    412891 C
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 2
s Antilocapra_americana.AntAmePen_scaffold_12469             99538 1 -    100397 A
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 I 2
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6097 1 +     43469 C
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 2
s Ateles_geoffroyi_b.tarseq_1536                             21209916 1 -  21539123 t
i Ateles_geoffroyi_b.tarseq_1536                            C 0 I 2
s Ateles_belzebuth.k141_445860                               44712 1 -     48001 t
i Ateles_belzebuth.k141_445860                           C 0 I 2
s Ateles_chamek.k141_1806455                                 27516 1 -     30947 t
i Ateles_chamek.k141_1806455                             C 0 I 2
s Ateles_geoffroyi_a.k141_833924                                9288 1 -     89868 t
i Ateles_geoffroyi_a.k141_833924                           C 0 I 2
s Ateles_marginatus.k141_803263                              13672 1 -     40414 t
i Ateles_marginatus.k141_803263                          C 0 I 2
s Ateles_paniscus.k141_457735                                21561 1 +     72325 T
i Ateles_paniscus.k141_457735                            C 0 I 2
s Balaenoptera_acutorostrata.KI537508.1                   15193092 1 +  23207421 c
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 2
s Balaenoptera_bonaerensis.DF707048.1                         3557 1 -     18090 c
i Balaenoptera_bonaerensis.DF707048.1                    C 0 I 2
s Beatragus_hunteri.BeaHun_scaffold_50177                    28142 1 +     34529 A
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 2
s Cacajao_ayresi.k141_552049                                102538 1 -    122966 T
i Cacajao_ayresi.k141_552049                             C 0 I 2
s Cacajao_calvus.k141_5142                                   62043 1 +     81800 T
i Cacajao_calvus.k141_5142                               C 0 I 2
s Cacajao_hosomi.k141_81245                                  31223 1 -     95584 T
i Cacajao_hosomi.k141_81245                              C 0 I 2
s Cacajao_melanocephalus.k141_619699                         55324 1 -    119600 T
i Cacajao_melanocephalus.k141_619699                     C 0 I 2
s Camelus_bactrianus.KN276810.1                           10003776 1 -  17673402 t
i Camelus_bactrianus.KN276810.1                          C 0 I 2
s Camelus_dromedarius.KN272107.1                           2336248 1 -   7040546 t
i Camelus_dromedarius.KN272107.1                         C 0 I 2
s Camelus_ferus.KB017975.1                                  404546 1 -   1652518 t
i Camelus_ferus.KB017975.1                               C 0 I 2
s CanFam4.chr16                                           17801804 1 -  60362399 t
i CanFam4.chr16                                          C 0 I 11
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     2545 1 -     43241 t
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 I 11
s Canis_lupus_dingo.QKWQ01000480.1                         9037247 1 -   9314153 t
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 11
s Canis_lupus_familiaris.chr16                            17961716 1 -  59632846 t
i Canis_lupus_familiaris.chr16                           C 0 I 11
s Canis_lupus_orion.HG994398.1                            18503018 1 +  63665305 t
i Canis_lupus_orion.HG994398.1                           C 0 I 11
s Capra_aegagrus.CM003241.1                               18831169 1 +  46296322 a
i Capra_aegagrus.CM003241.1                              C 0 I 2
s Capra_hircus.CM004588.1                                 18061889 1 -  44709034 a
i Capra_hircus.CM004588.1                                C 0 I 2
s Capromys_pilorides.CapPil_scaffold_65020                    2266 1 -     12242 T
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 2
s Carlito_syrichta.NW_007259797.1                           156603 1 -    496798 T
i Carlito_syrichta.NW_007259797.1                        C 0 I 2
s Carollia_perspicillata.CarPer_scaffold_92756                6439 1 -     11696 C
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 2
s Castor_canadensis.CasCan_scaffold_2074                    138605 1 +    179628 T
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 2
s Catagonus_wagneri.CatWag_scaffold_2839                     94891 1 +    217609 C
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 2
s Cephalopachus_bancanus.k141_1423433                         6101 1 +     31688 T
i Cephalopachus_bancanus.k141_1423433                    C 0 I 2
s Cercocebus_atys.KQ010504.1                               4478865 1 +   4669795 t
i Cercocebus_atys.KQ010504.1                             C 0 I 2
s Cercocebus_chrysogaster.k141_1540778                        3359 1 +     17872 T
i Cercocebus_chrysogaster.k141_1540778                   C 0 I 2
s Cercocebus_lunulatus.k141_3342297                           3954 1 -     14043 T
i Cercocebus_lunulatus.k141_3342297                      C 0 I 2
s Cercocebus_torquatus.k141_3057011                          12049 1 +     27781 T
i Cercocebus_torquatus.k141_3057011                      C 0 I 2
s Cercopithecus_ascanius.k141_1024104                        12199 1 -     20310 T
i Cercopithecus_ascanius.k141_1024104                    C 0 I 2
s Cercopithecus_cephus.k141_1078548                          15179 1 +     29689 T
i Cercopithecus_cephus.k141_1078548                      C 0 I 2
s Cercopithecus_diana.k141_1150327                            9935 1 -     20078 T
i Cercopithecus_diana.k141_1150327                       C 0 I 2
s Cercopithecus_hamlyni.k141_187466                          17850 1 -     27936 T
i Cercopithecus_hamlyni.k141_187466                      C 0 I 2
s Cercopithecus_lowei.k141_1854285                            6717 1 -     17152 T
i Cercopithecus_lowei.k141_1854285                       C 0 I 2
s Cercopithecus_albogularis.ctg5                                38826449 1 +  39242232 T
i Cercopithecus_albogularis.ctg5                               C 0 I 2
s Cercopithecus_mona.ctg39                                21225953 1 -  21565898 T
i Cercopithecus_mona.ctg39                               C 0 I 2
s Cercopithecus_neglectus.k141_2526306                       43072 1 -     53127 T
i Cercopithecus_neglectus.k141_2526306                   C 0 I 2
s Cercopithecus_nictitans.k141_1119862                        3322 1 +     13442 T
i Cercopithecus_nictitans.k141_1119862                   C 0 I 2
s Cercopithecus_petaurista.k141_807961                       17868 1 -     27947 T
i Cercopithecus_petaurista.k141_807961                   C 0 I 2
s Cercopithecus_pogonias.k141_2303387                          897 1 +     10558 T
i Cercopithecus_pogonias.k141_2303387                    C 0 I 2
s Cercopithecus_roloway.k141_2581234                          3902 1 +     14005 T
i Cercopithecus_roloway.k141_2581234                     C 0 I 2
s Cheracebus_lucifer.k141_49986                               1146 1 -     17098 T
i Cheracebus_lucifer.k141_49986                          C 0 I 2
s Cheracebus_lugens.k141_1393925                              1022 1 +     17877 T
i Cheracebus_lugens.k141_1393925                         C 0 I 2
s Cheracebus_regulus.k141_471822                            158589 1 -    216457 T
i Cheracebus_regulus.k141_471822                         C 0 I 2
s Cheracebus_torquatus.k141_1170026                          63064 1 +     76511 T
i Cheracebus_torquatus.k141_1170026                      C 0 I 2
s Chinchilla_lanigera.JH722012.1                           1254193 1 +   2543920 t
i Chinchilla_lanigera.JH722012.1                         C 0 I 2
s Chiropotes_israelita.k141_747660                           99667 1 +    146308 T
i Chiropotes_israelita.k141_747660                       C 0 I 2
s Chiropotes_sagulatus.k141_1421488                          31475 1 -     50570 t
i Chiropotes_sagulatus.k141_1421488                      C 0 I 2
s Chlorocebus_aethiops.ctg25                              18431772 1 -  18827391 T
i Chlorocebus_aethiops.ctg25                             C 0 I 2
s Chlorocebus_sabaeus.CM001947.1                         135425277 1 + 135778131 t
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 2
s Colobus_angolensis.KN981557.1                            1913778 1 +   2368649 t
i Colobus_angolensis.KN981557.1                          C 0 I 2
s Colobus_guereza.LG01                                   199952022 1 + 200372422 T
i Colobus_guereza.LG01                                   C 0 I 2
s Colobus_polykomos.k141_906115                              40303 1 +     84244 T
i Colobus_polykomos.k141_906115                          C 0 I 2
s Condylura_cristata.JH655891.1                           17549340 1 -  53390261 t
i Condylura_cristata.JH655891.1                          C 0 I 2
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29805 1 -     87169 T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 15
s Ctenodactylus_gundi.CteGun_scaffold_65                    838401 1 +   1526836 T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 2
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37223 1 +     51376 T
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 2
s Delphinapterus_leucas.KZ290073.1                        16812733 1 +  35494412 c
i Delphinapterus_leucas.KZ290073.1                       C 0 I 2
s Desmodus_rotundus.KZ672289.1                             8631441 1 +  20541912 C
i Desmodus_rotundus.KZ672289.1                           C 0 I 2
s Dinomys_branickii.DinBra_scaffold_21862                    37680 1 +     67921 T
i Dinomys_branickii.DinBra_scaffold_21862                I 4 I 2
s Elaphurus_davidianus.JRFZ01104969.1                       312214 1 +    607251 a
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 2
s Enhydra_lutris.KZ291758.1                               16330956 1 -  41312741 t
i Enhydra_lutris.KZ291758.1                              C 0 I 11
s Eptesicus_fuscus.JH977646.1                              2147048 1 -  14770903 g
i Eptesicus_fuscus.JH977646.1                            C 0 I 880
s Erythrocebus_patas.Contig38                             21208445 1 -  21539334 T
i Erythrocebus_patas.Contig38                            C 0 I 2
s Eschrichtius_robustus.EscRob_flattened_line_8968           12404 1 +    133382 C
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 2
s Eubalaena_japonica.EubJap_flattened_line_31514             26357 1 -     44125 C
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 I 2
s Felis_catus.CM001381.2                                  20238260 1 + 206538554 t
i Felis_catus.CM001381.2                                 C 0 I 2
s Felis_catus_fca126.CM031415.1                           20197103 1 + 205367284 t
i Felis_catus_fca126.CM031415.1                          C 0 I 2
s Felis_nigripes.FelNig_flattened_line_20823                 10857 1 -     36744 T
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 2
s Fukomys_damarensis.KN121974.1                             851703 1 +   3816255 T
i Fukomys_damarensis.KN121974.1                          C 0 I 2
s Galeopterus_variegatus.GalVar_scaffold_108840               2824 1 -      9135 T
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 I 2
s Giraffa_tippelskirchi.LVKQ01S007888.1                     610173 1 -    660261 a
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 I 2
s Glis_glis.GliGli_scaffold_19807                            32241 1 +     49224 T
i Glis_glis.GliGli_scaffold_19807                        C 0 I 2
s Gorilla_beringei.k141_3596273                              19279 1 -     32273 T
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341415 1 + 186649187 t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33935 1 +     78134 T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 2
s Helogale_parvula.HelPar_flattened_line_2585               243644 1 +    327341 T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 12
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 19378 1 +     36099 A
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 I 2
s Heterocephalus_glaber.JH602082.1                        20663491 1 +  22651954 t
i Heterocephalus_glaber.JH602082.1                       C 0 I 2
s Hoolock_leuconedys.ctg274                                    438075 1 +    630532 T
i Hoolock_leuconedys.ctg274                                 C 0 I 2
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46346 1 +     55795 T
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 2
s Hystrix_cristata.HysCri_scaffold_5660                      84382 1 +    135385 T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 2
s Ictidomys_tridecemlineatus.JH393364.1                    7522295 1 -   7955117 t
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 2
s Inia_geoffrensis.IniGeo_flattened_line_48101               23939 1 +     23964 C
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 I 2
s Jaculus_jaculus.JH725527.1                               8278418 1 -   9596543 a
i Jaculus_jaculus.JH725527.1                             C 0 I 2
s Kogia_breviceps.KogBre_flattened_line_192630                3314 1 -      3359 C
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 I 2
s Lagothrix_lagothricha.k141_1005387                         15722 1 -     38430 t
i Lagothrix_lagothricha.k141_1005387                     C 0 I 2
s Lasiurus_borealis.LasBor_scaffold_32767                    17694 1 -     42476 C
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 2
s Leptonychotes_weddellii.KB714746.1                       3044409 1 +   3914936 t
i Leptonychotes_weddellii.KB714746.1                     C 0 I 11
s Lepus_americanus.LepAme_scaffold_107385                     8089 1 -     14121 T
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 2
s Lophocebus_aterrimus.ctg367                              1440407 1 +   1826925 T
i Lophocebus_aterrimus.ctg367                            C 0 I 2
s Lycaon_pictus.CM007581.1                                17957956 1 -  59628241 t
i Lycaon_pictus.CM007581.1                               C 0 I 11
s Macaca_arctoides.k141_2326796                              10217 1 +     40492 T
i Macaca_arctoides.k141_2326796                          C 0 I 2
s Macaca_assamensis.Contig5                               59679471 1 +  60120075 T
i Macaca_assamensis.Contig5                              C 0 I 2
s Macaca_cyclopis.k119_18836                                 15988 1 -     26193 T
i Macaca_cyclopis.k119_18836                             C 0 I 2
s Macaca_fascicularis.k141_814140                            83764 1 -    114318 T
i Macaca_fascicularis.k141_814140                        C 0 I 2
s Macaca_fuscata.k119_255327                                  9455 1 -     23192 T
i Macaca_fuscata.k119_255327                             C 0 I 2
s Macaca_leonina.k141_3550399                                18919 1 -     29190 T
i Macaca_leonina.k141_3550399                            C 0 I 2
s Macaca_maura.k141_2733130                                  27497 1 +     37952 T
i Macaca_maura.k141_2733130                              C 0 I 2
s Macaca_mulatta.NC_041758.1                             186842574 1 + 187317192 t
i Macaca_mulatta.NC_041758.1                             C 0 I 2
s Macaca_nemestrina.KQ007038.1                            25461152 1 -  25927173 t
i Macaca_nemestrina.KQ007038.1                           C 0 I 2
s Macaca_nigra.k141_1655396                                  83353 1 +     89720 T
i Macaca_nigra.k141_1655396                              C 0 I 2
s Macaca_radiata.k141_3680011                                10346 1 +     20474 T
i Macaca_radiata.k141_3680011                            C 0 I 2
s Macaca_siberu.k141_635500                                  10143 1 -     14993 T
i Macaca_siberu.k141_635500                              C 0 I 2
s Macaca_silenus.Contig273                                  333005 1 -    668171 T
i Macaca_silenus.Contig273                               C 0 I 2
s Macaca_thibetana.k99_256239                                 8455 1 -     24072 t
i Macaca_thibetana.k99_256239                            C 0 I 2
s Macaca_tonkeana.k141_1498238                               29086 1 -     45290 T
i Macaca_tonkeana.k141_1498238                           C 0 I 2
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91977 1 +     94391 T
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 2
s Mandrillus_leucophaeus.scaffold280                      23940674 1 -  24302211 T
i Mandrillus_leucophaeus.scaffold280                     C 0 I 2
s Mandrillus_sphinx.Contig270                               354790 1 +    752769 T
i Mandrillus_sphinx.Contig270                            C 0 I 2
s Manis_javanica.JSZB01003497.1                              19559 1 +    737560 t
i Manis_javanica.JSZB01003497.1                          C 0 I 5
s Manis_pentadactyla.KN006162.1                              51577 1 -    317179 t
i Manis_pentadactyla.KN006162.1                          C 0 I 5
s Marmota_marmota.CZRN01000018.1                          33104577 1 -  40650429 t
i Marmota_marmota.CZRN01000018.1                         C 0 I 2
s Mellivora_capensis.MelCap_flattened_line_69365             11668 1 +     13704 t
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 11
s Mesoplodon_bidens.MesBid_scaffold_108144                    4613 1 +     10310 C
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 I 2
s Micronycteris_hirsuta.MicHir_scaffold_52381                17188 1 -     19307 T
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 2
s Miniopterus_natalensis.LDJU01000034.1                    1851595 1 +   8254450 c
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 2
s Miniopterus_schreibersii.MinSch_scaffold_18080             35275 1 +     64694 C
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 2
s Miopithecus_ogouensis.k141_534055                          12354 1 -     28506 T
i Miopithecus_ogouensis.k141_534055                      C 0 I 2
s Mirounga_angustirostris.MirAng_flattened_line_93702         7277 1 -      8324 t
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 11
s Monodon_monoceros.MonMon_M_scaffold_103                    28116 1 -    437263 C
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 2
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142989 1 -    366855 T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 2
s Moschus_moschiferus.MosMos_scaffold_13123                   2237 1 +     82753 A
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 2
s Murina_feae.MurFea_scaffold_85699                           8146 1 +     14753 t
i Murina_feae.MurFea_scaffold_85699                      I 4 I 2
s Mustela_putorius.JH418006.1                               303057 1 -  14710649 t
i Mustela_putorius.JH418006.1                            C 0 I 11
s Myocastor_coypus.MyoCoy_scaffold_10123                     72452 1 -     80779 T
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 I 2
s Myotis_brandtii.KE162005.1                                281782 1 -  10118263 C
i Myotis_brandtii.KE162005.1                             I 4 I 2
s Myotis_davidii.KB100139.1                                1589036 1 -   6019432 C
i Myotis_davidii.KB100139.1                              I 4 I 2
s Myotis_myotis.MyoMyo_scaffold_281845                        1288 1 +      1835 C
i Myotis_myotis.MyoMyo_scaffold_281845                   I 4 I 2
s Nasalis_larvatus.k141_413338                               18408 1 +     21681 T
i Nasalis_larvatus.k141_413338                           C 0 I 2
s Neomonachus_schauinslandi.NINY01007730.1                20308870 1 +  31847680 t
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 11
s Neophocaena_asiaeorientalis.KZ687982.1                   5867085 1 +   7148211 t
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 2
s Noctilio_leporinus.NocLep_scaffold_251                    759186 1 +    783361 C
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 2
s Nyctereutes_procyonoides.CAJHUB010000658.1               9151888 1 -   9404916 t
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 1134 I 11
s Ochotona_princeps.JH802162.1                             1365516 1 +   3988456 T
i Ochotona_princeps.JH802162.1                           C 0 I 2
s Odobenus_rosmarus.KB229312.1                              508012 1 -   2017862 t
i Odobenus_rosmarus.KB229312.1                           C 0 I 11
s Okapia_johnstoni.LVCL01S0005463.1                          78089 1 -    150152 A
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 2
s Orcinus_orca.KB316932.1                                  2782996 1 -  10937097 a
i Orcinus_orca.KB316932.1                                C 0 I 2
s Oryctolagus_cuniculus.CM000791.1                        67148990 1 + 174332312 t
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 2
s Otocyon_megalotis.JAEUCK010005147.1                       465312 1 -    559221 t
i Otocyon_megalotis.JAEUCK010005147.1                    I 1613 I 11
s Ovis_canadensis.OviCan_scaffold_2572                      175340 1 -    191736 A
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 I 2
s Pan_paniscus.KQ411613.1                                    47380 1 +     80009 t
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146250 1 + 189151597 t
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152465 1 +    230217 T
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 2
s Panthera_pardus.KV860321.1                                265674 1 +  18783137 t
i Panthera_pardus.KV860321.1                             C 0 I 2
s Panthera_tigris.KE722367.1                               4722554 1 -   8748460 t
i Panthera_tigris.KE722367.1                             C 0 I 2
s Pantholops_hodgsonii.KE114653.1                          1266245 1 -   2937107 a
i Pantholops_hodgsonii.KE114653.1                        C 0 I 2
s Papio_anubis.CM001495.2                                183446480 1 + 183742232 t
i Papio_anubis.CM001495.2                                C 0 I 2
s Papio_cynocephalus.k141_4307930                            10130 1 +     20448 T
i Papio_cynocephalus.k141_4307930                        C 0 I 2
s Papio_hamadryas.Contig39                                20566938 1 +  20919399 T
i Papio_hamadryas.Contig39                               C 0 I 2
s Papio_kindae.k141_1936966                                   8870 1 +     41871 T
i Papio_kindae.k141_1936966                              C 0 I 2
s Papio_papio.k141_802527                                    12163 1 +     27711 T
i Papio_papio.k141_802527                                C 0 I 2
s Papio_ursinus.k141_5274964                                  3162 1 -     11374 T
i Papio_ursinus.k141_5274964                             C 0 I 2
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13965 1 -     78924 T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 2
s Phocoena_phocoena.PhoPho_flattened_line_24159              10039 1 +     63832 T
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 2
s Piliocolobus_badius.k141_1142974                            1477 1 +     68526 T
i Piliocolobus_badius.k141_1142974                       C 0 I 2
s Piliocolobus_gordonorum.k141_381342                        41623 1 +     89929 T
i Piliocolobus_gordonorum.k141_381342                    C 0 I 2
s Piliocolobus_kirkii.k141_448987                            43037 1 +     51399 T
i Piliocolobus_kirkii.k141_448987                        C 0 I 2
s Piliocolobus_tephrosceles.PDMG02000141.1                14299274 1 -  14605196 t
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 2
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3068 1 +     22620 C
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 2
s Pithecia_albicans.k141_1476471                              4929 1 +     26961 T
i Pithecia_albicans.k141_1476471                         C 0 I 2
s Pithecia_chrysocephala.k141_839575                          1074 1 +     23417 T
i Pithecia_chrysocephala.k141_839575                     C 0 I 2
s Pithecia_hirsuta.k141_305604                                4921 1 +     29694 T
i Pithecia_hirsuta.k141_305604                           C 0 I 2
s Pithecia_mittermeieri.k141_446740                          29947 1 +     52772 T
i Pithecia_mittermeieri.k141_446740                      C 0 I 2
s Pithecia_pissinattii.k141_1824269                           4943 1 +     26198 T
i Pithecia_pissinattii.k141_1824269                      C 0 I 2
s Pithecia_pithecia.tarseq_165                             3941491 1 +   4542175 T
i Pithecia_pithecia.tarseq_165                           C 0 I 2
s Pithecia_vanzolinii.k141_1697688                            4907 1 -     23490 t
i Pithecia_vanzolinii.k141_1697688                       C 0 I 2
s Plecturocebus_bernhardi.k141_2549090                        9163 1 -     39866 T
i Plecturocebus_bernhardi.k141_2549090                   C 0 I 2
s Plecturocebus_brunneus.k141_1495506                        18329 1 +     34906 T
i Plecturocebus_brunneus.k141_1495506                    C 0 I 2
s Plecturocebus_caligatus.k141_1382851                       22591 1 +     87950 T
i Plecturocebus_caligatus.k141_1382851                   C 0 I 2
s Plecturocebus_cinerascens.k141_1164729                     23420 1 +     88961 T
i Plecturocebus_cinerascens.k141_1164729                 C 0 I 2
s Plecturocebus_cupreus.k141_2351393                          9091 1 +     39403 T
i Plecturocebus_cupreus.k141_2351393                     C 0 I 2
s Plecturocebus_dubius.k141_1058799                          22872 1 -     87928 T
i Plecturocebus_dubius.k141_1058799                      C 0 I 2
s Plecturocebus_grovesi.k141_2013005                         29831 1 +     60166 T
i Plecturocebus_grovesi.k141_2013005                     C 0 I 2
s Plecturocebus_hoffmannsi.k141_3303950                      30028 1 +     67232 T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 I 2
s Plecturocebus_miltoni.k141_349282                          25501 1 +     90634 T
i Plecturocebus_miltoni.k141_349282                      C 0 I 2
s Plecturocebus_moloch.k141_1031110                          22873 1 -     89403 T
i Plecturocebus_moloch.k141_1031110                      C 0 I 2
s Pongo_abelii.CM009266.2                                189134396 1 + 189387572 t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9574005 1 +   9816681 T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Pteronotus_parnellii.KE909381.1                            16470 1 -     21811 t
i Pteronotus_parnellii.KE909381.1                        C 0 I 2
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41870 1 +     42204 T
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 11
s Pteropus_alecto.KB030862.1                              22978070 1 +  28871421 N
i Pteropus_alecto.KB030862.1                             C 0 I 2
s Puma_concolor.QAVW01001104.1                            20275624 1 -  38429054 t
i Puma_concolor.QAVW01001104.1                           C 0 I 2
s Pygathrix_cinerea.k141_1153803                             18394 1 -     91421 T
i Pygathrix_cinerea.k141_1153803                         C 0 I 2
s Pygathrix_nigripes_b.ctg100                                 7612517 1 +   7812017 T
i Pygathrix_nigripes_b.ctg100                               C 0 I 2
s Pygathrix_nigripes_a.k141_215492                             18424 1 -     72585 T
i Pygathrix_nigripes_a.k141_215492                         C 0 I 2
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6831 1 +     55207 A
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 2
s Rhinopithecus_bieti.k119_217274                            10092 1 -     11128 T
i Rhinopithecus_bieti.k119_217274                        C 0 I 2
s Rhinopithecus_roxellana.NC_044550.1                     91239460 1 - 195417433 t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 2
s Rhinopithecus_strykeri.ctg102                            7675107 1 +   7961872 T
i Rhinopithecus_strykeri.ctg102                          C 0 I 2
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89160 1 -     96226 C
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 2
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154483 1 -    313613 G
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 2
s Semnopithecus_entellus.k141_1672505                         3266 1 -     12572 T
i Semnopithecus_entellus.k141_1672505                    C 0 I 2
s Semnopithecus_hypoleucos.k141_1615806                      30118 1 +     39453 T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 I 2
s Semnopithecus_johnii.k141_670120                           10626 1 +     27826 T
i Semnopithecus_johnii.k141_670120                       C 0 I 2
s Semnopithecus_priam.k141_638794                            10162 1 -     19483 T
i Semnopithecus_priam.k141_638794                        C 0 I 2
s Semnopithecus_schistaceus.k141_1572284                      3465 1 -     12762 T
i Semnopithecus_schistaceus.k141_1572284                 C 0 I 2
s Semnopithecus_vetulus.k141_910252                           3310 1 +     13763 T
i Semnopithecus_vetulus.k141_910252                      C 0 I 2
s Sorex_araneus.JH798187.1                                13652305 1 -  18376816 T
i Sorex_araneus.JH798187.1                               C 0 I 2
s Spermophilus_dauricus.KZ294078.1                         1955441 1 -   3870691 t
i Spermophilus_dauricus.KZ294078.1                       C 0 I 2
s Spilogale_gracilis.SpiGra_flattened_line_13525             32345 1 +     97271 t
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 11
s Suricata_suricatta.SurSur_flattened_line_6629              19639 1 -    196729 T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 16
s Sus_scrofa.CM000828.4                                    6812455 1 +  69701581 c
i Sus_scrofa.CM000828.4                                  C 0 I 2
s Tadarida_brasiliensis.TadBra_scaffold_25820                12150 1 +     41958 T
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 2
s Tarsius_lariang.k141_2201908                               27096 1 +     70052 T
i Tarsius_lariang.k141_2201908                           C 0 I 2
s Tarsius_wallacei.k141_254427                                1893 1 -     16117 T
i Tarsius_wallacei.k141_254427                           C 0 I 2
s Theropithecus_gelada.CM009954.1                        186431786 1 + 186847797 t
i Theropithecus_gelada.CM009954.1                        C 0 I 2
s Tonatia_saurophila.TonSau_scaffold_294                     82535 1 +    610378 C
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 2
s Trachypithecus_auratus.k141_722599                         14211 1 -     20410 T
i Trachypithecus_auratus.k141_722599                     C 0 I 2
s Trachypithecus_crepusculus.k141_582567                      3327 1 -     12674 T
i Trachypithecus_crepusculus.k141_582567                 C 0 I 2
s Trachypithecus_cristatus.k141_580354                       14319 1 +     19930 T
i Trachypithecus_cristatus.k141_580354                   C 0 I 2
s Trachypithecus_francoisi.k141_1412647                      10714 1 -     19997 T
i Trachypithecus_francoisi.k141_1412647                  C 0 I 2
s Trachypithecus_geei.k141_277701                            50856 1 -     60166 T
i Trachypithecus_geei.k141_277701                        C 0 I 2
s Trachypithecus_germaini.k141_912491                        18322 1 -     27529 T
i Trachypithecus_germaini.k141_912491                    C 0 I 2
s Trachypithecus_leucocephalus.k141_587342                   10684 1 -     10723 T
i Trachypithecus_leucocephalus.k141_587342               C 0 I 2
s Trachypithecus_obscurus.k141_190785                        28184 1 +     32220 T
i Trachypithecus_obscurus.k141_190785                    C 0 I 2
s Trachypithecus_phayrei.ctg124                            5942281 1 +   6242583 T
i Trachypithecus_phayrei.ctg124                          C 0 I 2
s Trachypithecus_pileatus.k141_2007326                       11534 1 +     20839 T
i Trachypithecus_pileatus.k141_2007326                   C 0 I 2
s Tragulus_javanicus.TraJav_scaffold_40725                    1148 1 +     27266 A
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 I 2
s Tupaia_chinensis.KB320699.1                              2157334 1 +   4065304 T
i Tupaia_chinensis.KB320699.1                            C 0 I 4
s Tursiops_truncatus.MRVK01000835.1                       15739238 1 +  33153633 c
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 2
s Uropsilus_gracilis.UroGra_scaffold_12083                   54590 1 -     77625 T
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 2
s Ursus_maritimus.KK499267.1                               4851730 1 -   5085361 t
i Ursus_maritimus.KK499267.1                             C 0 I 11
s Vicugna_pacos.KN270157.1                                 5373297 1 -   5488506 t
i Vicugna_pacos.KN270157.1                               C 0 I 2
s Vulpes_lagopus.VulLag_flattened_line_30954                 13422 1 -     43706 t
i Vulpes_lagopus.VulLag_flattened_line_30954             I 1278 I 11
s Xerus_inauris.XerIna_scaffold_2302                          2440 1 +    224448 T
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 2
s Zapus_hudsonius.ZapHud_scaffold_11398                      16149 1 +     63895 A
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 2
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202 0 +      8798 C
e Galago_senegalensis.k141_631886                             7400 0 +     11339 C
e Galago_moholi.ctg2040                                     429710 0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964 2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Alouatta_seniculus.k141_117119                             16904 5 +     50774 I
e Alouatta_puruensis.k141_362188                              2452 5 +      5663 I
e Alouatta_nigerrima.k141_1929159                             1725 2 +     30492 I
e Alouatta_macconnelli.k141_918386                            2767 2 -      9457 I
e Alouatta_juara.k141_1302312                                 1685 5 +     27940 I
e Alouatta_caraya.k141_1701091                                2760 5 -     36483 I
e Mus_pahari.LT608297.1                                   31357244 5 -  89631738 I
e Mus_spretus.CM004101.1                                  90754999 5 - 130317789 I
e Mus_musculus.chr8                                       87652510 5 - 129401213 I
e Mus_caroli.LT608237.1                                   84363009 5 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445 0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734 0 -     33856 C
e Perodicticus_potto.k141_1186926                              597 0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219 0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Trachypithecus_laotum.k141_907409                          11930 0 -     21137 C
e Trachypithecus_hatinhensis.k141_17719                         27 0 +      9229 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   7643 0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              106718 0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73921 0 +    116680 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_42075                     2166 5 -     30804 I
e Rhinolophus_sinicus.LVEH01000134.1                        368295 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53571770 803 +  90668790 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Psammomys_obesus.NESX01036370.1                            12264 4 -     21651 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Presbytis_mitrata.k141_1087752                              8407 2 +     19060 I
e Presbytis_comata.k141_677006                               76590 2 -     81375 I
e Petromus_typicus.PetTyp_scaffold_42190                     29421 0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18196650 5 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Ovis_aries.CM001607.2                                   17587352 2 +  44047080 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Onychomys_torridus.OnyTor_scaffold_2986                    82023 5 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   27021 4 +     28053 I
e Odocoileus_virginianus.KZ100018.1                         145852 291 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869 0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414 0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947 0 - 196305487 C
e Nannospalax_galili.KL204047.1                            2036805 5 -   3037898 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190536 0 +    196477 C
e Myotis_lucifugus.GL429869.1                              3905132 6 -   4330536 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398 7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Microtus_ochrogaster.CM001695.1                         11262363 4 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184080 4 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 34623 4 +    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                        14651 0 -    207569 C
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             269001 0 -    662738 C
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_101188                404 0 +      9903 C
e Hipposideros_armiger.JXIK01000431.1                       111834 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689 0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Ellobius_talpinus.LOJH01081419.1                            2300 4 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          22380 4 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64769 0 +   2246927 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Crocidura_indochinensis.CroInd_scaffold_37019               4143 0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11668671 0 + 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_18520                 51876 8 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           1799 0 +     23735 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chlorocebus_pygerythrus.k141_1025673                       18276 0 -     50209 C
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1750 0 -      8501 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Bubalus_bubalis.KI419123.1                               2820570 632 +   4408762 I
e Bos_taurus.CM000203.6                                   18084890 633 +  45695690 I
e Bos_mutus.JH880303.1                                     1126816 621 -   1948126 I
e Bos_indicus.CM003047.1                                  20274252 633 +  48749331 I
e Bison_bison.KN261452.1                                    201071 631 -    288883 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538 0 +      5281 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      13962 0 +     20879 C
e Allactaga_bullata.AllBul_scaffold_9566                     75684 4 -     89534 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     72614 5 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      10038 3 +     62944 G-----AT
s Allenopithecus_nigroviridis.k141_3361533                   17907 3 -     52922 G-----AT
i Allenopithecus_nigroviridis.k141_3361533               I 2 C 0
s Allochrocebus_lhoesti.k141_4309873                         17842 3 -     28001 G-----AT
i Allochrocebus_lhoesti.k141_4309873                     I 2 C 0
s Allochrocebus_preussi.k141_1442296                          8337 3 -     18505 G-----AT
i Allochrocebus_preussi.k141_1442296                     I 2 C 0
s Allochrocebus_solatus.k141_166128                           9190 3 -     12518 G-----AT
i Allochrocebus_solatus.k141_166128                      I 2 C 0
s Alouatta_belzebul.k141_3560514                              9660 3 +     51355 G-----AT
i Alouatta_belzebul.k141_3560514                         I 2 C 0
s Alouatta_caraya.k141_1701091                                2765 3 -     36483 G-----AT
i Alouatta_caraya.k141_1701091                           I 5 C 0
s Alouatta_discolor.k141_566626                              13222 3 +     28687 G-----AT
i Alouatta_discolor.k141_566626                          I 2 C 0
s Alouatta_juara.k141_1302312                                 1690 3 +     27940 G-----AT
i Alouatta_juara.k141_1302312                            I 5 C 0
s Alouatta_macconnelli.k141_918386                            2769 3 -      9457 G-----AT
i Alouatta_macconnelli.k141_918386                       I 2 C 0
s Alouatta_nigerrima.k141_1929159                             1727 3 +     30492 G-----AT
i Alouatta_nigerrima.k141_1929159                        I 2 C 0
s Alouatta_palliata.k141_2135620                              5723 3 +     47717 G-----AT
i Alouatta_palliata.k141_2135620                         I 2 C 0
s Alouatta_puruensis.k141_362188                              2457 3 +      5663 G-----AT
i Alouatta_puruensis.k141_362188                         I 5 C 0
s Alouatta_seniculus.k141_117119                             16909 3 +     50774 G-----AT
i Alouatta_seniculus.k141_117119                         I 5 C 0
s Ammotragus_lervia.NIVO01071767.1                          677058 1 -   2318259 t-------
i Ammotragus_lervia.NIVO01071767.1                       I 2 I 5
s Anoura_caudifer.AnoCau_scaffold_1412                      186694 1 +    412891 T-------
i Anoura_caudifer.AnoCau_scaffold_1412                   I 2 I 1
s Antilocapra_americana.AntAmePen_scaffold_12469             99541 1 -    100397 T-------
i Antilocapra_americana.AntAmePen_scaffold_12469         I 2 I 5
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6100 1 +     43469 T-------
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 2 I 1
s Ateles_geoffroyi_b.tarseq_1536                             21209919 3 -  21539123 g-----at
i Ateles_geoffroyi_b.tarseq_1536                            I 2 C 0
s Ateles_belzebuth.k141_445860                               44715 3 -     48001 g-----at
i Ateles_belzebuth.k141_445860                           I 2 C 0
s Ateles_chamek.k141_1806455                                 27519 3 -     30947 g-----at
i Ateles_chamek.k141_1806455                             I 2 C 0
s Ateles_geoffroyi_a.k141_833924                                9291 3 -     89868 g-----at
i Ateles_geoffroyi_a.k141_833924                           I 2 C 0
s Ateles_marginatus.k141_803263                              13675 3 -     40414 g-----at
i Ateles_marginatus.k141_803263                          I 2 C 0
s Ateles_paniscus.k141_457735                                21564 3 +     72325 G-----AT
i Ateles_paniscus.k141_457735                            I 2 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193095 1 +  23207421 t-------
i Balaenoptera_acutorostrata.KI537508.1                  I 2 I 9
s Balaenoptera_bonaerensis.DF707048.1                         3560 1 -     18090 t-------
i Balaenoptera_bonaerensis.DF707048.1                    I 2 I 9
s Beatragus_hunteri.BeaHun_scaffold_50177                    28145 1 +     34529 T-------
i Beatragus_hunteri.BeaHun_scaffold_50177                I 2 I 5
s Bison_bison.KN261452.1                                    201702 1 -    288883 t-------
i Bison_bison.KN261452.1                                 I 631 I 5
s Bos_indicus.CM003047.1                                  20274885 1 +  48749331 t-------
i Bos_indicus.CM003047.1                                 I 633 I 5
s Bos_mutus.JH880303.1                                     1127437 1 -   1948126 t-------
i Bos_mutus.JH880303.1                                   I 621 I 5
s Bos_taurus.CM000203.6                                   18085523 1 +  45695690 t-------
i Bos_taurus.CM000203.6                                  I 633 I 5
s Bubalus_bubalis.KI419123.1                               2821202 1 +   4408762 t-------
i Bubalus_bubalis.KI419123.1                             I 632 I 5
s Cacajao_ayresi.k141_552049                                102541 3 -    122966 G-----AT
i Cacajao_ayresi.k141_552049                             I 2 C 0
s Cacajao_calvus.k141_5142                                   62046 3 +     81800 G-----AT
i Cacajao_calvus.k141_5142                               I 2 C 0
s Cacajao_hosomi.k141_81245                                  31226 3 -     95584 G-----AT
i Cacajao_hosomi.k141_81245                              I 2 C 0
s Cacajao_melanocephalus.k141_619699                         55327 3 -    119600 G-----AT
i Cacajao_melanocephalus.k141_619699                     I 2 C 0
s Camelus_bactrianus.KN276810.1                           10003779 1 -  17673402 a-------
i Camelus_bactrianus.KN276810.1                          I 2 I 1
s Camelus_dromedarius.KN272107.1                           2336251 1 -   7040546 a-------
i Camelus_dromedarius.KN272107.1                         I 2 I 1
s Camelus_ferus.KB017975.1                                  404549 1 -   1652518 a-------
i Camelus_ferus.KB017975.1                               I 2 I 1
s Capra_aegagrus.CM003241.1                               18831172 1 +  46296322 t-------
i Capra_aegagrus.CM003241.1                              I 2 I 5
s Capra_hircus.CM004588.1                                 18061892 1 -  44709034 t-------
i Capra_hircus.CM004588.1                                I 2 I 5
s Capromys_pilorides.CapPil_scaffold_65020                    2269 3 -     12242 T-----TA
i Capromys_pilorides.CapPil_scaffold_65020               I 2 C 0
s Carlito_syrichta.NW_007259797.1                           156606 3 -    496798 T-----TT
i Carlito_syrichta.NW_007259797.1                        I 2 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6442 1 -     11696 T-------
i Carollia_perspicillata.CarPer_scaffold_92756           I 2 I 1
s Castor_canadensis.CasCan_scaffold_2074                    138608 3 +    179628 T-----TA
i Castor_canadensis.CasCan_scaffold_2074                 I 2 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     94894 1 +    217609 T-------
i Catagonus_wagneri.CatWag_scaffold_2839                 I 2 I 9
s Cephalopachus_bancanus.k141_1423433                         6104 3 +     31688 T-----TT
i Cephalopachus_bancanus.k141_1423433                    I 2 C 0
s Cercocebus_atys.KQ010504.1                               4478868 3 +   4669795 g-----at
i Cercocebus_atys.KQ010504.1                             I 2 C 0
s Cercocebus_chrysogaster.k141_1540778                        3362 3 +     17872 G-----AT
i Cercocebus_chrysogaster.k141_1540778                   I 2 C 0
s Cercocebus_lunulatus.k141_3342297                           3957 3 -     14043 G-----AT
i Cercocebus_lunulatus.k141_3342297                      I 2 C 0
s Cercocebus_torquatus.k141_3057011                          12052 3 +     27781 G-----AT
i Cercocebus_torquatus.k141_3057011                      I 2 C 0
s Cercopithecus_ascanius.k141_1024104                        12202 3 -     20310 G-----AT
i Cercopithecus_ascanius.k141_1024104                    I 2 C 0
s Cercopithecus_cephus.k141_1078548                          15182 3 +     29689 G-----AT
i Cercopithecus_cephus.k141_1078548                      I 2 C 0
s Cercopithecus_diana.k141_1150327                            9938 3 -     20078 G-----AT
i Cercopithecus_diana.k141_1150327                       I 2 C 0
s Cercopithecus_hamlyni.k141_187466                          17853 3 -     27936 G-----AT
i Cercopithecus_hamlyni.k141_187466                      I 2 C 0
s Cercopithecus_lowei.k141_1854285                            6720 3 -     17152 G-----AT
i Cercopithecus_lowei.k141_1854285                       I 2 C 0
s Cercopithecus_albogularis.ctg5                                38826452 3 +  39242232 G-----AT
i Cercopithecus_albogularis.ctg5                               I 2 C 0
s Cercopithecus_mona.ctg39                                21225956 3 -  21565898 G-----AT
i Cercopithecus_mona.ctg39                               I 2 C 0
s Cercopithecus_neglectus.k141_2526306                       43075 3 -     53127 G-----AT
i Cercopithecus_neglectus.k141_2526306                   I 2 C 0
s Cercopithecus_nictitans.k141_1119862                        3325 3 +     13442 G-----AT
i Cercopithecus_nictitans.k141_1119862                   I 2 C 0
s Cercopithecus_petaurista.k141_807961                       17871 3 -     27947 G-----AT
i Cercopithecus_petaurista.k141_807961                   I 2 C 0
s Cercopithecus_pogonias.k141_2303387                          900 3 +     10558 G-----AT
i Cercopithecus_pogonias.k141_2303387                    I 2 C 0
s Cercopithecus_roloway.k141_2581234                          3905 3 +     14005 G-----AT
i Cercopithecus_roloway.k141_2581234                     I 2 C 0
s Cheracebus_lucifer.k141_49986                               1149 3 -     17098 G-----AT
i Cheracebus_lucifer.k141_49986                          I 2 C 0
s Cheracebus_lugens.k141_1393925                              1025 3 +     17877 G-----AT
i Cheracebus_lugens.k141_1393925                         I 2 C 0
s Cheracebus_regulus.k141_471822                            158592 3 -    216457 G-----AT
i Cheracebus_regulus.k141_471822                         I 2 C 0
s Cheracebus_torquatus.k141_1170026                          63067 3 +     76511 G-----AT
i Cheracebus_torquatus.k141_1170026                      I 2 C 0
s Chinchilla_lanigera.JH722012.1                           1254196 3 +   2543920 t-----ta
i Chinchilla_lanigera.JH722012.1                         I 2 C 0
s Chiropotes_israelita.k141_747660                           99670 3 +    146308 G-----AT
i Chiropotes_israelita.k141_747660                       I 2 C 0
s Chiropotes_sagulatus.k141_1421488                          31478 3 -     50570 g-----at
i Chiropotes_sagulatus.k141_1421488                      I 2 C 0
s Chlorocebus_aethiops.ctg25                              18431775 3 -  18827391 G-----AT
i Chlorocebus_aethiops.ctg25                             I 2 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18276 3 -     50209 G-----AT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425280 3 + 135778131 g-----at
i Chlorocebus_sabaeus.CM001947.1                         I 2 C 0
s Colobus_angolensis.KN981557.1                            1913781 3 +   2368649 g-----at
i Colobus_angolensis.KN981557.1                          I 2 C 0
s Colobus_guereza.LG01                                   199952025 3 + 200372422 G-----AT
i Colobus_guereza.LG01                                   I 2 C 0
s Colobus_polykomos.k141_906115                              40306 3 +     84244 G-----AT
i Colobus_polykomos.k141_906115                          I 2 C 0
s Condylura_cristata.JH655891.1                           17549343 1 -  53390261 t-------
i Condylura_cristata.JH655891.1                          I 2 I 1
s Ctenodactylus_gundi.CteGun_scaffold_65                    838404 3 +   1526836 T-----TG
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 2 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37226 3 +     51376 T-----TA
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 2 C 0
s Delphinapterus_leucas.KZ290073.1                        16812736 1 +  35494412 t-------
i Delphinapterus_leucas.KZ290073.1                       I 2 I 6
s Desmodus_rotundus.KZ672289.1                             8631444 1 +  20541912 T-------
i Desmodus_rotundus.KZ672289.1                           I 2 I 1
s Dinomys_branickii.DinBra_scaffold_21862                    37683 3 +     67921 T-----TA
i Dinomys_branickii.DinBra_scaffold_21862                I 2 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       312217 1 +    607251 t-------
i Elaphurus_davidianus.JRFZ01104969.1                    I 2 I 5
s Eptesicus_fuscus.JH977646.1                              2147929 1 -  14770903 t-------
i Eptesicus_fuscus.JH977646.1                            I 880 I 1
s Erythrocebus_patas.Contig38                             21208448 3 -  21539334 G-----AT
i Erythrocebus_patas.Contig38                            I 2 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12407 1 +    133382 T-------
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 2 I 9
s Eubalaena_japonica.EubJap_flattened_line_31514             26360 1 -     44125 T-------
i Eubalaena_japonica.EubJap_flattened_line_31514         I 2 I 9
s Fukomys_damarensis.KN121974.1                             851706 3 +   3816255 T-----TA
i Fukomys_damarensis.KN121974.1                          I 2 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               2827 3 -      9135 T-----TA
i Galeopterus_variegatus.GalVar_scaffold_108840          I 2 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     610176 1 -    660261 t-------
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 2 I 5
s Glis_glis.GliGli_scaffold_19807                            32244 3 +     49224 T-----TC
i Glis_glis.GliGli_scaffold_19807                        I 2 C 0
s Gorilla_beringei.k141_3596273                              19280 3 -     32273 G-----AT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341416 3 + 186649187 g-----at
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33938 3 +     78134 T-----TC
i Graphiurus_murinus.GraMur_scaffold_10447               I 2 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 19381 1 +     36099 T-------
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 2 I 5
s Heterocephalus_glaber.JH602082.1                        20663494 3 +  22651954 t-----ta
i Heterocephalus_glaber.JH602082.1                       I 2 C 0
s Hoolock_leuconedys.ctg274                                    438078 3 +    630532 G-----AT
i Hoolock_leuconedys.ctg274                                 I 2 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84385 3 +    135385 T-----TA
i Hystrix_cristata.HysCri_scaffold_5660                  I 2 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7522298 3 -   7955117 c-----at
i Ictidomys_tridecemlineatus.JH393364.1                  I 2 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               23942 1 +     23964 T-------
i Inia_geoffrensis.IniGeo_flattened_line_48101           I 2 I 6
s Jaculus_jaculus.JH725527.1                               8278421 3 -   9596543 t-----tt
i Jaculus_jaculus.JH725527.1                             I 2 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                3317 1 -      3359 T-------
i Kogia_breviceps.KogBre_flattened_line_192630           I 2 I 6
s Lagothrix_lagothricha.k141_1005387                         15725 3 -     38430 g-----at
i Lagothrix_lagothricha.k141_1005387                     I 2 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    17697 1 -     42476 T-------
i Lasiurus_borealis.LasBor_scaffold_32767                I 2 I 1
s Lepus_americanus.LepAme_scaffold_107385                     8092 3 -     14121 T-----TA
i Lepus_americanus.LepAme_scaffold_107385                I 2 C 0
s Lipotes_vexillifer.KE559953.1                             269001 1 -    662738 t-------
i Lipotes_vexillifer.KE559953.1                          C 0 I 6
s Lophocebus_aterrimus.ctg367                              1440410 3 +   1826925 G-----AT
i Lophocebus_aterrimus.ctg367                            I 2 C 0
s Macaca_arctoides.k141_2326796                              10220 3 +     40492 G-----AT
i Macaca_arctoides.k141_2326796                          I 2 C 0
s Macaca_assamensis.Contig5                               59679474 3 +  60120075 G-----AT
i Macaca_assamensis.Contig5                              I 2 C 0
s Macaca_cyclopis.k119_18836                                 15991 3 -     26193 G-----AT
i Macaca_cyclopis.k119_18836                             I 2 C 0
s Macaca_fascicularis.k141_814140                            83767 3 -    114318 A-----AT
i Macaca_fascicularis.k141_814140                        I 2 C 0
s Macaca_fuscata.k119_255327                                  9458 3 -     23192 G-----AT
i Macaca_fuscata.k119_255327                             I 2 C 0
s Macaca_leonina.k141_3550399                                18922 3 -     29190 A-----AT
i Macaca_leonina.k141_3550399                            I 2 C 0
s Macaca_maura.k141_2733130                                  27500 3 +     37952 A-----AT
i Macaca_maura.k141_2733130                              I 2 C 0
s Macaca_mulatta.NC_041758.1                             186842577 3 + 187317192 g-----at
i Macaca_mulatta.NC_041758.1                             I 2 C 0
s Macaca_nemestrina.KQ007038.1                            25461155 3 -  25927173 a-----at
i Macaca_nemestrina.KQ007038.1                           I 2 C 0
s Macaca_nigra.k141_1655396                                  83356 3 +     89720 A-----AT
i Macaca_nigra.k141_1655396                              I 2 C 0
s Macaca_radiata.k141_3680011                                10349 3 +     20474 G-----AT
i Macaca_radiata.k141_3680011                            I 2 C 0
s Macaca_siberu.k141_635500                                  10146 3 -     14993 A-----AT
i Macaca_siberu.k141_635500                              I 2 C 0
s Macaca_silenus.Contig273                                  333008 3 -    668171 A-----AT
i Macaca_silenus.Contig273                               I 2 C 0
s Macaca_thibetana.k99_256239                                 8458 3 -     24072 g-----at
i Macaca_thibetana.k99_256239                            I 2 C 0
s Macaca_tonkeana.k141_1498238                               29089 3 -     45290 A-----AT
i Macaca_tonkeana.k141_1498238                           I 2 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91980 1 +     94391 T-------
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 2 I 1
s Mandrillus_leucophaeus.scaffold280                      23940677 3 -  24302211 G-----AT
i Mandrillus_leucophaeus.scaffold280                     I 2 C 0
s Mandrillus_sphinx.Contig270                               354793 3 +    752769 G-----AT
i Mandrillus_sphinx.Contig270                            I 2 C 0
s Marmota_marmota.CZRN01000018.1                          33104580 3 -  40650429 C-----AT
i Marmota_marmota.CZRN01000018.1                         I 2 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    4616 1 +     10310 T-------
i Mesoplodon_bidens.MesBid_scaffold_108144               I 2 I 6
s Micronycteris_hirsuta.MicHir_scaffold_52381                17191 1 -     19307 T-------
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 2 I 1
s Miniopterus_natalensis.LDJU01000034.1                    1851598 1 +   8254450 t-------
i Miniopterus_natalensis.LDJU01000034.1                  I 2 I 1
s Miniopterus_schreibersii.MinSch_scaffold_18080             35278 1 +     64694 T-------
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 2 I 1
s Miopithecus_ogouensis.k141_534055                          12357 3 -     28506 G-----AT
i Miopithecus_ogouensis.k141_534055                      I 2 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    28119 1 -    437263 T-------
i Monodon_monoceros.MonMon_M_scaffold_103                I 2 I 6
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142992 1 -    366855 T-------
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 2 I 1
s Moschus_moschiferus.MosMos_scaffold_13123                   2240 1 +     82753 T-------
i Moschus_moschiferus.MosMos_scaffold_13123              I 2 I 5
s Murina_feae.MurFea_scaffold_85699                           8149 1 +     14753 t-------
i Murina_feae.MurFea_scaffold_85699                      I 2 I 1
s Myocastor_coypus.MyoCoy_scaffold_10123                     72455 3 -     80779 T-----TA
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 2 C 0
s Myotis_brandtii.KE162005.1                                281785 1 -  10118263 T-------
i Myotis_brandtii.KE162005.1                             I 2 I 1
s Myotis_davidii.KB100139.1                                1589039 1 -   6019432 T-------
i Myotis_davidii.KB100139.1                              I 2 I 1
s Myotis_lucifugus.GL429869.1                              3905138 1 -   4330536 t-------
i Myotis_lucifugus.GL429869.1                            I 6 I 1
s Myotis_myotis.MyoMyo_scaffold_281845                        1291 1 +      1835 T-------
i Myotis_myotis.MyoMyo_scaffold_281845                   I 2 I 1
s Nasalis_larvatus.k141_413338                               18411 3 +     21681 G-----AT
i Nasalis_larvatus.k141_413338                           I 2 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5867088 1 +   7148211 t-------
i Neophocaena_asiaeorientalis.KZ687982.1                 I 2 I 6
s Noctilio_leporinus.NocLep_scaffold_251                    759189 1 +    783361 T-------
i Noctilio_leporinus.NocLep_scaffold_251                 I 2 I 1
s Ochotona_princeps.JH802162.1                             1365519 3 +   3988456 C-----TA
i Ochotona_princeps.JH802162.1                           I 2 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          78092 1 -    150152 T-------
i Okapia_johnstoni.LVCL01S0005463.1                      I 2 I 5
s Orcinus_orca.KB316932.1                                  2782999 1 -  10937097 t-------
i Orcinus_orca.KB316932.1                                I 2 I 6
s Oryctolagus_cuniculus.CM000791.1                        67148993 3 + 174332312 t-----ta
i Oryctolagus_cuniculus.CM000791.1                       I 2 C 0
s Ovis_aries.CM001607.2                                   17587354 1 +  44047080 t-------
i Ovis_aries.CM001607.2                                  I 2 I 5
s Ovis_canadensis.OviCan_scaffold_2572                      175343 1 -    191736 T-------
i Ovis_canadensis.OviCan_scaffold_2572                   I 2 I 5
s Pan_paniscus.KQ411613.1                                    47381 3 +     80009 g-----at
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146251 3 + 189151597 g-----at
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1266248 1 -   2937107 t-------
i Pantholops_hodgsonii.KE114653.1                        I 2 I 5
s Papio_anubis.CM001495.2                                183446483 3 + 183742232 g-----at
i Papio_anubis.CM001495.2                                I 2 C 0
s Papio_cynocephalus.k141_4307930                            10133 3 +     20448 G-----AT
i Papio_cynocephalus.k141_4307930                        I 2 C 0
s Papio_hamadryas.Contig39                                20566941 3 +  20919399 G-----AT
i Papio_hamadryas.Contig39                               I 2 C 0
s Papio_kindae.k141_1936966                                   8873 3 +     41871 G-----AT
i Papio_kindae.k141_1936966                              I 2 C 0
s Papio_papio.k141_802527                                    12166 3 +     27711 G-----AT
i Papio_papio.k141_802527                                I 2 C 0
s Papio_ursinus.k141_5274964                                  3165 3 -     11374 G-----AT
i Papio_ursinus.k141_5274964                             I 2 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     29421 3 -     29689 T-----TA
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              10042 1 +     63832 T-------
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 2 I 6
s Piliocolobus_badius.k141_1142974                            1480 3 +     68526 G-----AT
i Piliocolobus_badius.k141_1142974                       I 2 C 0
s Piliocolobus_gordonorum.k141_381342                        41626 3 +     89929 G-----AT
i Piliocolobus_gordonorum.k141_381342                    I 2 C 0
s Piliocolobus_kirkii.k141_448987                            43040 3 +     51399 G-----AT
i Piliocolobus_kirkii.k141_448987                        I 2 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299277 3 -  14605196 g-----at
i Piliocolobus_tephrosceles.PDMG02000141.1               I 2 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3071 1 +     22620 T-------
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 2 I 1
s Pithecia_albicans.k141_1476471                              4932 3 +     26961 G-----AT
i Pithecia_albicans.k141_1476471                         I 2 C 0
s Pithecia_chrysocephala.k141_839575                          1077 3 +     23417 G-----AT
i Pithecia_chrysocephala.k141_839575                     I 2 C 0
s Pithecia_hirsuta.k141_305604                                4924 3 +     29694 G-----AT
i Pithecia_hirsuta.k141_305604                           I 2 C 0
s Pithecia_mittermeieri.k141_446740                          29950 3 +     52772 G-----AT
i Pithecia_mittermeieri.k141_446740                      I 2 C 0
s Pithecia_pissinattii.k141_1824269                           4946 3 +     26198 G-----AT
i Pithecia_pissinattii.k141_1824269                      I 2 C 0
s Pithecia_pithecia.tarseq_165                             3941494 3 +   4542175 G-----AT
i Pithecia_pithecia.tarseq_165                           I 2 C 0
s Pithecia_vanzolinii.k141_1697688                            4910 3 -     23490 g-----at
i Pithecia_vanzolinii.k141_1697688                       I 2 C 0
s Plecturocebus_bernhardi.k141_2549090                        9166 3 -     39866 G-----AT
i Plecturocebus_bernhardi.k141_2549090                   I 2 C 0
s Plecturocebus_brunneus.k141_1495506                        18332 3 +     34906 G-----AT
i Plecturocebus_brunneus.k141_1495506                    I 2 C 0
s Plecturocebus_caligatus.k141_1382851                       22594 3 +     87950 G-----AT
i Plecturocebus_caligatus.k141_1382851                   I 2 C 0
s Plecturocebus_cinerascens.k141_1164729                     23423 3 +     88961 G-----AT
i Plecturocebus_cinerascens.k141_1164729                 I 2 C 0
s Plecturocebus_cupreus.k141_2351393                          9094 3 +     39403 G-----AT
i Plecturocebus_cupreus.k141_2351393                     I 2 C 0
s Plecturocebus_dubius.k141_1058799                          22875 3 -     87928 G-----AT
i Plecturocebus_dubius.k141_1058799                      I 2 C 0
s Plecturocebus_grovesi.k141_2013005                         29834 3 +     60166 G-----AT
i Plecturocebus_grovesi.k141_2013005                     I 2 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30031 3 +     67232 G-----AT
i Plecturocebus_hoffmannsi.k141_3303950                  I 2 C 0
s Plecturocebus_miltoni.k141_349282                          25504 3 +     90634 G-----AT
i Plecturocebus_miltoni.k141_349282                      I 2 C 0
s Plecturocebus_moloch.k141_1031110                          22876 3 -     89403 G-----AT
i Plecturocebus_moloch.k141_1031110                      I 2 C 0
s Pongo_abelii.CM009266.2                                189134397 3 + 189387572 g-----at
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9574006 3 +   9816681 G-----AT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76592 3 -     81375 G-----AT
i Presbytis_comata.k141_677006                           I 2 C 0
s Presbytis_mitrata.k141_1087752                              8409 3 +     19060 G-----AT
i Presbytis_mitrata.k141_1087752                         I 2 C 0
s Pteronotus_parnellii.KE909381.1                            16473 1 -     21811 t-------
i Pteronotus_parnellii.KE909381.1                        I 2 I 1
s Pteropus_alecto.KB030862.1                              22978073 1 +  28871421 N-------
i Pteropus_alecto.KB030862.1                             I 2 I 1
s Pygathrix_cinerea.k141_1153803                             18397 3 -     91421 G-----AC
i Pygathrix_cinerea.k141_1153803                         I 2 C 0
s Pygathrix_nigripes_b.ctg100                                 7612520 3 +   7812017 G-----AC
i Pygathrix_nigripes_b.ctg100                               I 2 C 0
s Pygathrix_nigripes_a.k141_215492                             18427 3 -     72585 G-----AC
i Pygathrix_nigripes_a.k141_215492                         I 2 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6834 1 +     55207 T-------
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 2 I 5
s Rhinopithecus_bieti.k119_217274                            10095 3 -     11128 G-----AC
i Rhinopithecus_bieti.k119_217274                        I 2 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239463 3 - 195417433 g-----ac
i Rhinopithecus_roxellana.NC_044550.1                    I 2 C 0
s Rhinopithecus_strykeri.ctg102                            7675110 3 +   7961872 G-----AC
i Rhinopithecus_strykeri.ctg102                          I 2 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89163 1 -     96226 T-------
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 2 I 1
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154486 1 -    313613 T-------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 2 I 1
s Semnopithecus_entellus.k141_1672505                         3269 3 -     12572 G-----AT
i Semnopithecus_entellus.k141_1672505                    I 2 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30121 3 +     39453 G-----AT
i Semnopithecus_hypoleucos.k141_1615806                  I 2 C 0
s Semnopithecus_johnii.k141_670120                           10629 3 +     27826 G-----AT
i Semnopithecus_johnii.k141_670120                       I 2 C 0
s Semnopithecus_priam.k141_638794                            10165 8 -     19483 GATATGAT
i Semnopithecus_priam.k141_638794                        I 2 C 0
s Semnopithecus_schistaceus.k141_1572284                      3468 3 -     12762 G-----AT
i Semnopithecus_schistaceus.k141_1572284                 I 2 C 0
s Semnopithecus_vetulus.k141_910252                           3313 3 +     13763 G-----AT
i Semnopithecus_vetulus.k141_910252                      I 2 C 0
s Sorex_araneus.JH798187.1                                13652308 1 -  18376816 T-------
i Sorex_araneus.JH798187.1                               I 2 I 1
s Spermophilus_dauricus.KZ294078.1                         1955444 3 -   3870691 c-----at
i Spermophilus_dauricus.KZ294078.1                       I 2 C 0
s Sus_scrofa.CM000828.4                                    6812458 1 +  69701581 T-------
i Sus_scrofa.CM000828.4                                  I 2 I 9
s Tadarida_brasiliensis.TadBra_scaffold_25820                12153 1 +     41958 T-------
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 2 I 1
s Tarsius_lariang.k141_2201908                               27099 3 +     70052 T-----TT
i Tarsius_lariang.k141_2201908                           I 2 C 0
s Tarsius_wallacei.k141_254427                                1896 3 -     16117 T-----TT
i Tarsius_wallacei.k141_254427                           I 2 C 0
s Theropithecus_gelada.CM009954.1                        186431789 3 + 186847797 g-----at
i Theropithecus_gelada.CM009954.1                        I 2 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106718 3 +    114563 T-----TA
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     82538 1 +    610378 T-------
i Tonatia_saurophila.TonSau_scaffold_294                 I 2 I 1
s Trachypithecus_auratus.k141_722599                         14214 3 -     20410 G-----AT
i Trachypithecus_auratus.k141_722599                     I 2 C 0
s Trachypithecus_crepusculus.k141_582567                      3330 3 -     12674 G-----AT
i Trachypithecus_crepusculus.k141_582567                 I 2 C 0
s Trachypithecus_cristatus.k141_580354                       14322 3 +     19930 G-----AT
i Trachypithecus_cristatus.k141_580354                   I 2 C 0
s Trachypithecus_francoisi.k141_1412647                      10717 3 -     19997 G-----AT
i Trachypithecus_francoisi.k141_1412647                  I 2 C 0
s Trachypithecus_geei.k141_277701                            50859 3 -     60166 G-----AT
i Trachypithecus_geei.k141_277701                        I 2 C 0
s Trachypithecus_germaini.k141_912491                        18325 3 -     27529 G-----AT
i Trachypithecus_germaini.k141_912491                    I 2 C 0
s Trachypithecus_leucocephalus.k141_587342                   10687 3 -     10723 G-----AT
i Trachypithecus_leucocephalus.k141_587342               I 2 C 0
s Trachypithecus_obscurus.k141_190785                        28187 3 +     32220 G-----AT
i Trachypithecus_obscurus.k141_190785                    I 2 C 0
s Trachypithecus_phayrei.ctg124                            5942284 3 +   6242583 G-----AT
i Trachypithecus_phayrei.ctg124                          I 2 C 0
s Trachypithecus_pileatus.k141_2007326                       11537 3 +     20839 G-----AT
i Trachypithecus_pileatus.k141_2007326                   I 2 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    1151 1 +     27266 T-------
i Tragulus_javanicus.TraJav_scaffold_40725               I 2 I 5
s Tupaia_chinensis.KB320699.1                              2157339 3 +   4065304 T-----TT
i Tupaia_chinensis.KB320699.1                            I 4 I 122
s Tursiops_truncatus.MRVK01000835.1                       15739241 1 +  33153633 t-------
i Tursiops_truncatus.MRVK01000835.1                      I 2 I 6
s Uropsilus_gracilis.UroGra_scaffold_12083                   54593 1 -     77625 T-------
i Uropsilus_gracilis.UroGra_scaffold_12083               I 2 I 1
s Vicugna_pacos.KN270157.1                                 5373300 1 -   5488506 a-------
i Vicugna_pacos.KN270157.1                               I 2 I 1
s Xerus_inauris.XerIna_scaffold_2302                          2443 3 +    224448 C-----AT
i Xerus_inauris.XerIna_scaffold_2302                     I 2 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      16152 3 +     63895 T-----CT
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 2 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202 0 +      8798 C
e Galago_senegalensis.k141_631886                             7400 0 +     11339 C
e Galago_moholi.ctg2040                                     429710 0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964 2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Mus_pahari.LT608297.1                                   31357244 5 -  89631738 I
e Mus_spretus.CM004101.1                                  90754999 5 - 130317789 I
e Mus_musculus.chr8                                       87652510 5 - 129401213 I
e Mus_caroli.LT608237.1                                   84363009 5 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445 0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734 0 -     33856 C
e Perodicticus_potto.k141_1186926                              597 0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219 0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 13423 11 -     43706 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851731 11 -   5085361 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Trachypithecus_laotum.k141_907409                          11930 0 -     21137 C
e Trachypithecus_hatinhensis.k141_17719                         27 0 +      9229 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   7643 0 +      8208 C
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73921 0 +    116680 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Suricata_suricatta.SurSur_flattened_line_6629              19640 16 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             32346 11 +     97271 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_42075                     2166 5 -     30804 I
e Rhinolophus_sinicus.LVEH01000134.1                        368295 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53571770 803 +  90668790 I
e Puma_concolor.QAVW01001104.1                            20275625 2 -  38429054 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         41871 11 +     42204 I
e Psammomys_obesus.NESX01036370.1                            12264 4 -     21651 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Peromyscus_maniculatus.KI615324.1                       18196650 5 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13966 2 -     78924 I
e Panthera_tigris.KE722367.1                               4722555 2 -   8748460 I
e Panthera_pardus.KV860321.1                                265675 2 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  152466 2 +    230217 I
e Otocyon_megalotis.JAEUCK010005147.1                       465313 11 -    559221 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Onychomys_torridus.OnyTor_scaffold_2986                    82023 5 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   27021 4 +     28053 I
e Odocoileus_virginianus.KZ100018.1                         145852 291 +    630418 I
e Odobenus_rosmarus.KB229312.1                              508013 11 -   2017862 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869 0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414 0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947 0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9151889 11 -   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                20308871 11 +  31847680 I
e Nannospalax_galili.KL204047.1                            2036805 5 -   3037898 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190536 0 +    196477 C
e Mustela_putorius.JH418006.1                               303058 11 -  14710649 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398 7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7278 11 -      8324 I
e Microtus_ochrogaster.CM001695.1                         11262363 4 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184080 4 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 34623 4 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365             11669 11 +     13704 I
e Megaderma_lyra.MegLyr_scaffold_4542                        14651 0 -    207569 C
e Manis_pentadactyla.KN006162.1                              51578 5 -    317179 I
e Manis_javanica.JSZB01003497.1                              19560 5 +    737560 I
e Lycaon_pictus.CM007581.1                                17957957 11 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Leptonychotes_weddellii.KB714746.1                       3044410 11 +   3914936 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  46347 2 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_101188                404 0 +      9903 C
e Hipposideros_armiger.JXIK01000431.1                       111834 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Helogale_parvula.HelPar_flattened_line_2585               243645 12 +    327341 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689 0 +     41679 C
e Felis_nigripes.FelNig_flattened_line_20823                 10858 2 -     36744 I
e Felis_catus_fca126.CM031415.1                           20197104 2 + 205367284 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Enhydra_lutris.KZ291758.1                               16330957 11 -  41312741 I
e Ellobius_talpinus.LOJH01081419.1                            2300 4 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          22380 4 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64769 0 +   2246927 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             29806 15 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_37019               4143 0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11668671 0 + 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_18520                 51876 8 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           1799 0 +     23735 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1750 0 -      8501 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Canis_lupus_orion.HG994398.1                            18503019 11 +  63665305 I
e Canis_lupus_familiaris.chr16                            17961717 11 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9037248 11 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     2546 11 -     43241 I
e CanFam4.chr16                                           17801805 11 -  60362399 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538 0 +      5281 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      13962 0 +     20879 C
e Allactaga_bullata.AllBul_scaffold_9566                     75684 4 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             81008 11 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9511928 11 -  29979442 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     72614 5 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           828618 2 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      10041 3 +     62944 AT-A
s Allactaga_bullata.AllBul_scaffold_9566                     75688 4 -     89534 ATTA
i Allactaga_bullata.AllBul_scaffold_9566                 I 4 I 6
s Allenopithecus_nigroviridis.k141_3361533                   17910 3 -     52922 AT-A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         17845 3 -     28001 AT-A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8340 3 -     18505 AT-A
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9193 3 -     12518 AT-A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              9663 3 +     51355 AT-A
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                2768 3 -     36483 AT-A
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13225 3 +     28687 AT-A
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 1693 3 +     27940 AT-A
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            2772 3 -      9457 AT-A
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             1730 3 +     30492 AT-A
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              5726 3 +     47717 AT-A
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              2460 3 +      5663 AT-A
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             16912 3 +     50774 AT-A
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          677064 1 -   2318259 ---a
i Ammotragus_lervia.NIVO01071767.1                       I 5 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      186696 1 +    412891 ---T
i Anoura_caudifer.AnoCau_scaffold_1412                   I 1 I 4
s Antilocapra_americana.AntAmePen_scaffold_12469             99547 1 -    100397 ---A
i Antilocapra_americana.AntAmePen_scaffold_12469         I 5 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13962 1 +     20879 ---A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6102 1 +     43469 ---T
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 1 I 4
s Ateles_geoffroyi_b.tarseq_1536                             21209922 3 -  21539123 at-a
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               44718 3 -     48001 at-a
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 27522 3 -     30947 at-a
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9294 3 -     89868 at-a
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              13678 3 -     40414 at-a
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                21567 3 +     72325 AT-A
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193105 1 +  23207421 ---a
i Balaenoptera_acutorostrata.KI537508.1                  I 9 C 0
s Balaenoptera_bonaerensis.DF707048.1                         3570 1 -     18090 ---a
i Balaenoptera_bonaerensis.DF707048.1                    I 9 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    28151 1 +     34529 ---A
i Beatragus_hunteri.BeaHun_scaffold_50177                I 5 C 0
s Bison_bison.KN261452.1                                    201708 1 -    288883 ---t
i Bison_bison.KN261452.1                                 I 5 C 0
s Bos_indicus.CM003047.1                                  20274891 1 +  48749331 ---t
i Bos_indicus.CM003047.1                                 I 5 C 0
s Bos_mutus.JH880303.1                                     1127443 1 -   1948126 ---t
i Bos_mutus.JH880303.1                                   I 5 C 0
s Bos_taurus.CM000203.6                                   18085529 1 +  45695690 ---t
i Bos_taurus.CM000203.6                                  I 5 C 0
s Bubalus_bubalis.KI419123.1                               2821208 1 +   4408762 ---t
i Bubalus_bubalis.KI419123.1                             I 5 I 278
s Cacajao_ayresi.k141_552049                                102544 3 -    122966 AT-A
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   62049 3 +     81800 AT-A
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31229 3 -     95584 AT-A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55330 3 -    119600 AT-A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10003781 1 -  17673402 ---a
i Camelus_bactrianus.KN276810.1                          I 1 C 0
s Camelus_dromedarius.KN272107.1                           2336253 1 -   7040546 ---a
i Camelus_dromedarius.KN272107.1                         I 1 C 0
s Camelus_ferus.KB017975.1                                  404551 1 -   1652518 ---a
i Camelus_ferus.KB017975.1                               I 1 C 0
s Capra_aegagrus.CM003241.1                               18831178 1 +  46296322 ---a
i Capra_aegagrus.CM003241.1                              I 5 I 10
s Capra_hircus.CM004588.1                                 18061898 1 -  44709034 ---a
i Capra_hircus.CM004588.1                                I 5 I 10
s Capromys_pilorides.CapPil_scaffold_65020                    2272 2 -     12242 AT--
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 1
s Carlito_syrichta.NW_007259797.1                           156609 4 -    496798 ATAC
i Carlito_syrichta.NW_007259797.1                        C 0 I 12
s Carollia_perspicillata.CarPer_scaffold_92756                6444 1 -     11696 ---T
i Carollia_perspicillata.CarPer_scaffold_92756           I 1 I 4
s Castor_canadensis.CasCan_scaffold_2074                    138611 4 +    179628 TGTA
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     94904 1 +    217609 ---A
i Catagonus_wagneri.CatWag_scaffold_2839                 I 9 C 0
s Cephalopachus_bancanus.k141_1423433                         6107 4 +     31688 ATAC
i Cephalopachus_bancanus.k141_1423433                    C 0 I 12
s Cercocebus_atys.KQ010504.1                               4478871 3 +   4669795 at-a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3365 3 +     17872 AT-A
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           3960 3 -     14043 AT-A
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12055 3 +     27781 AT-A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12205 3 -     20310 AT-A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15185 3 +     29689 AT-A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            9941 3 -     20078 AT-A
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          17856 3 -     27936 AT-A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            6723 3 -     17152 AT-A
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826455 3 +  39242232 AT-A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21225959 3 -  21565898 AT-A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43078 3 -     53127 AT-A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3328 3 +     13442 AT-A
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       17874 3 -     27947 AT-A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                          903 3 +     10558 AT-A
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          3908 3 +     14005 AT-A
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1152 3 -     17098 AT-A
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1028 3 +     17877 AT-A
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            158595 3 -    216457 AT-A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63070 3 +     76511 AT-A
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254199 4 +   2543920 ataa
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_israelita.k141_747660                           99673 3 +    146308 AT-A
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          31481 3 -     50570 at-a
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18431778 3 -  18827391 AC-A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18279 3 -     50209 AC-A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425283 3 + 135778131 ac-a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1913784 3 +   2368649 at-a
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952028 3 + 200372422 AT-A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40309 3 +     84244 AT-A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549345 1 -  53390261 ---c
i Condylura_cristata.JH655891.1                          I 1 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    838407 4 +   1526836 ATAA
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 659
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37229 4 +     51376 ATAG
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 16
s Delphinapterus_leucas.KZ290073.1                        16812743 1 +  35494412 ---a
i Delphinapterus_leucas.KZ290073.1                       I 6 C 0
s Desmodus_rotundus.KZ672289.1                             8631446 1 +  20541912 ---T
i Desmodus_rotundus.KZ672289.1                           I 1 I 4
s Dinomys_branickii.DinBra_scaffold_21862                    37686 4 +     67921 ATAA
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       312223 1 +    607251 ---a
i Elaphurus_davidianus.JRFZ01104969.1                    I 5 C 0
s Eptesicus_fuscus.JH977646.1                              2147931 1 -  14770903 ---c
i Eptesicus_fuscus.JH977646.1                            I 1 I 4
s Erythrocebus_patas.Contig38                             21208451 3 -  21539334 AT-A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12417 1 +    133382 ---A
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 9 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             26370 1 -     44125 ---A
i Eubalaena_japonica.EubJap_flattened_line_31514         I 9 C 0
s Fukomys_damarensis.KN121974.1                             851709 4 +   3816255 ATAG
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               2830 4 -      9135 ATAA
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     610182 1 -    660261 ---a
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 5 C 0
s Glis_glis.GliGli_scaffold_19807                            32247 4 +     49224 ATAA
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              19283 3 -     32273 AT-A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341419 3 + 186649187 at-a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33941 4 +     78134 ATAA
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 1
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 19387 1 +     36099 ---A
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 5 I 10
s Heterocephalus_glaber.JH602082.1                        20663497 4 +  22651954 ataa
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hoolock_leuconedys.ctg274                                    438081 3 +    630532 AT-A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84388 4 +    135385 ATAG
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_48101               23949 1 +     23964 ---G
i Inia_geoffrensis.IniGeo_flattened_line_48101           I 6 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7522301 2 -   7955117 at--
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 1
s Jaculus_jaculus.JH725527.1                               8278424 4 -   9596543 atta
i Jaculus_jaculus.JH725527.1                             C 0 I 6
s Kogia_breviceps.KogBre_flattened_line_192630                3324 1 -      3359 ---A
i Kogia_breviceps.KogBre_flattened_line_192630           I 6 C 0
s Lagothrix_lagothricha.k141_1005387                         15728 3 -     38430 at-a
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    17699 1 -     42476 ---T
i Lasiurus_borealis.LasBor_scaffold_32767                I 1 I 4
s Lipotes_vexillifer.KE559953.1                             269008 1 -    662738 ---a
i Lipotes_vexillifer.KE559953.1                          I 6 C 0
s Lepus_americanus.LepAme_scaffold_107385                     8095 2 -     14121 AT--
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 1
s Lophocebus_aterrimus.ctg367                              1440413 3 +   1826925 AT-A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                              10223 3 +     40492 AT-A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679477 3 +  60120075 AT-A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 15994 3 -     26193 AT-A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            83770 3 -    114318 AT-A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9461 3 -     23192 AT-A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                18925 3 -     29190 AT-A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27503 3 +     37952 AT-A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842580 3 + 187317192 at-a
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461158 3 -  25927173 at-a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83359 3 +     89720 AT-A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10352 3 +     20474 AT-A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10149 3 -     14993 AT-A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333011 3 -    668171 AT-A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8461 3 -     24072 at-a
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29092 3 -     45290 AT-A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91982 1 +     94391 ---T
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 1 I 4
s Mandrillus_leucophaeus.scaffold280                      23940680 3 -  24302211 AT-A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354796 3 +    752769 AT-A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    4623 1 +     10310 ---A
i Mesoplodon_bidens.MesBid_scaffold_108144               I 6 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                17193 1 -     19307 ---T
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 1 I 4
s Miniopterus_natalensis.LDJU01000034.1                    1851600 1 +   8254450 ---t
i Miniopterus_natalensis.LDJU01000034.1                  I 1 I 4
s Miniopterus_schreibersii.MinSch_scaffold_18080             35280 1 +     64694 ---T
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 1 I 4
s Marmota_marmota.CZRN01000018.1                          33104583 2 -  40650429 AC--
i Marmota_marmota.CZRN01000018.1                         C 0 I 1
s Miopithecus_ogouensis.k141_534055                          12360 3 -     28506 AT-A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    28126 1 -    437263 ---A
i Monodon_monoceros.MonMon_M_scaffold_103                I 6 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 142994 1 -    366855 ---T
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 1 I 14
s Moschus_moschiferus.MosMos_scaffold_13123                   2246 1 +     82753 ---A
i Moschus_moschiferus.MosMos_scaffold_13123              I 5 C 0
s Murina_feae.MurFea_scaffold_85699                           8151 1 +     14753 ---t
i Murina_feae.MurFea_scaffold_85699                      I 1 I 215
s Myocastor_coypus.MyoCoy_scaffold_10123                     72458 4 -     80779 ACAA
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 I 11
s Myotis_brandtii.KE162005.1                                281787 1 -  10118263 ---T
i Myotis_brandtii.KE162005.1                             I 1 T 1739
s Myotis_davidii.KB100139.1                                1589041 1 -   6019432 ---T
i Myotis_davidii.KB100139.1                              I 1 I 4
s Myotis_lucifugus.GL429869.1                              3905140 1 -   4330536 ---t
i Myotis_lucifugus.GL429869.1                            I 1 I 4
s Myotis_myotis.MyoMyo_scaffold_281845                        1293 1 +      1835 ---T
i Myotis_myotis.MyoMyo_scaffold_281845                   I 1 I 4
s Nasalis_larvatus.k141_413338                               18414 3 +     21681 AT-A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5867095 1 +   7148211 ---a
i Neophocaena_asiaeorientalis.KZ687982.1                 I 6 I 9
s Noctilio_leporinus.NocLep_scaffold_251                    759191 1 +    783361 ---G
i Noctilio_leporinus.NocLep_scaffold_251                 I 1 I 18
s Okapia_johnstoni.LVCL01S0005463.1                          78098 1 -    150152 ---A
i Okapia_johnstoni.LVCL01S0005463.1                      I 5 C 0
s Orcinus_orca.KB316932.1                                  2783006 1 -  10937097 ---a
i Orcinus_orca.KB316932.1                                I 6 C 0
s Ovis_aries.CM001607.2                                   17587360 1 +  44047080 ---a
i Ovis_aries.CM001607.2                                  I 5 I 10
s Ovis_canadensis.OviCan_scaffold_2572                      175349 1 -    191736 ---A
i Ovis_canadensis.OviCan_scaffold_2572                   I 5 C 0
s Ochotona_princeps.JH802162.1                             1365522 2 +   3988456 AT--
i Ochotona_princeps.JH802162.1                           C 0 I 2
s Oryctolagus_cuniculus.CM000791.1                        67148996 2 + 174332312 at--
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 1
s Pan_paniscus.KQ411613.1                                    47384 3 +     80009 at-a
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146254 3 + 189151597 at-a
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1266254 1 -   2937107 ---a
i Pantholops_hodgsonii.KE114653.1                        I 5 C 0
s Papio_anubis.CM001495.2                                183446486 3 + 183742232 at-a
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10136 3 +     20448 AT-A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20566944 3 +  20919399 AT-A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   8876 3 +     41871 AT-A
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12169 3 +     27711 AT-A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3168 3 -     11374 AT-A
i Papio_ursinus.k141_5274964                             C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     29424 4 -     29689 ATAA
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              10049 1 +     63832 ---A
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 6 C 0
s Piliocolobus_badius.k141_1142974                            1483 3 +     68526 AT-A
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        41629 3 +     89929 AT-A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43043 3 +     51399 AT-A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299280 3 -  14605196 at-a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3073 1 +     22620 ---T
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 1 I 4
s Pithecia_albicans.k141_1476471                              4935 3 +     26961 AT-A
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1080 3 +     23417 AT-A
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                4927 3 +     29694 GT-A
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          29953 3 +     52772 AT-A
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           4949 3 +     26198 AT-A
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3941497 3 +   4542175 AT-A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            4913 3 -     23490 at-a
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9169 3 -     39866 AT-A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18335 3 +     34906 AT-A
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       22597 3 +     87950 AT-A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23426 3 +     88961 AT-A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9097 3 +     39403 AT-A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          22878 3 -     87928 AT-A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         29837 3 +     60166 AT-A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30034 3 +     67232 AT-A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          25507 3 +     90634 AT-A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          22879 3 -     89403 AT-A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189134400 3 + 189387572 at-a
i Pongo_abelii.CM009266.2                                C 0 I 41
s Pongo_pygmaeus.ctg66                                     9574009 3 +   9816681 AT-A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76595 3 -     81375 GT-A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8412 3 +     19060 GT-A
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Pteronotus_parnellii.KE909381.1                            16475 1 -     21811 ---t
i Pteronotus_parnellii.KE909381.1                        I 1 I 4
s Pteropus_alecto.KB030862.1                              22978075 1 +  28871421 ---N
i Pteropus_alecto.KB030862.1                             I 1 I 4
s Pygathrix_cinerea.k141_1153803                             18400 3 -     91421 AT-A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612523 3 +   7812017 AT-A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18430 3 -     72585 AT-A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6840 1 +     55207 ---A
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 5 C 0
s Rhinopithecus_bieti.k119_217274                            10098 3 -     11128 AT-A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239466 3 - 195417433 at-A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675113 3 +   7961872 AT-A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89165 1 -     96226 ---T
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 1 I 4
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154488 1 -    313613 ---C
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 1 C 0
s Semnopithecus_entellus.k141_1672505                         3272 3 -     12572 AT-A
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30124 3 +     39453 AT-A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           10632 3 +     27826 AT-A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10173 3 -     19483 AT-A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3471 3 -     12762 AT-A
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3316 3 +     13763 AT-A
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sorex_araneus.JH798187.1                                13652310 1 -  18376816 ---A
i Sorex_araneus.JH798187.1                               I 1 I 22
s Sus_scrofa.CM000828.4                                    6812468 1 +  69701581 ---a
i Sus_scrofa.CM000828.4                                  I 9 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                12155 1 +     41958 ---T
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 1 I 4
s Spermophilus_dauricus.KZ294078.1                         1955447 2 -   3870691 at--
i Spermophilus_dauricus.KZ294078.1                       C 0 I 1
s Tarsius_lariang.k141_2201908                               27102 4 +     70052 ATAC
i Tarsius_lariang.k141_2201908                           C 0 I 12
s Tarsius_wallacei.k141_254427                                1899 4 -     16117 ATAC
i Tarsius_wallacei.k141_254427                           C 0 I 12
s Theropithecus_gelada.CM009954.1                        186431792 3 + 186847797 at-a
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106721 4 +    114563 ATAA
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     82540 1 +    610378 ---T
i Tonatia_saurophila.TonSau_scaffold_294                 I 1 I 4
s Trachypithecus_auratus.k141_722599                         14217 3 -     20410 AT-A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3333 3 -     12674 AT-A
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14325 3 +     19930 AT-A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      10720 3 -     19997 AT-A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            50862 3 -     60166 AT-A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18328 3 -     27529 AT-A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_leucocephalus.k141_587342                   10690 3 -     10723 AT-A
i Trachypithecus_leucocephalus.k141_587342               C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28190 3 +     32220 AT-A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942287 3 +   6242583 AT-A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11540 3 +     20839 AT-A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    1157 1 +     27266 ---A
i Tragulus_javanicus.TraJav_scaffold_40725               I 5 C 0
s Tupaia_chinensis.KB320699.1                              2157464 4 +   4065304 ataa
i Tupaia_chinensis.KB320699.1                            I 122 C 0
s Tursiops_truncatus.MRVK01000835.1                       15739248 1 +  33153633 ---a
i Tursiops_truncatus.MRVK01000835.1                      I 6 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54595 1 -     77625 ---C
i Uropsilus_gracilis.UroGra_scaffold_12083               I 1 C 0
s Vicugna_pacos.KN270157.1                                 5373302 1 -   5488506 ---a
i Vicugna_pacos.KN270157.1                               I 1 C 0
s Xerus_inauris.XerIna_scaffold_2302                          2446 4 +    224448 ATAA
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      16155 4 +     63895 ATTA
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 6
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202 0 +      8798 C
e Galago_senegalensis.k141_631886                             7400 0 +     11339 C
e Galago_moholi.ctg2040                                     429710 0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964 2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Mus_pahari.LT608297.1                                   31357244 5 -  89631738 I
e Mus_spretus.CM004101.1                                  90754999 5 - 130317789 I
e Mus_musculus.chr8                                       87652510 5 - 129401213 I
e Mus_caroli.LT608237.1                                   84363009 5 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445 0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734 0 -     33856 C
e Perodicticus_potto.k141_1186926                              597 0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219 0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 13423 11 -     43706 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851731 11 -   5085361 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Trachypithecus_laotum.k141_907409                          11930 0 -     21137 C
e Trachypithecus_hatinhensis.k141_17719                         27 0 +      9229 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   7643 0 +      8208 C
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73921 0 +    116680 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Suricata_suricatta.SurSur_flattened_line_6629              19640 16 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             32346 11 +     97271 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_42075                     2166 5 -     30804 I
e Rhinolophus_sinicus.LVEH01000134.1                        368295 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53571770 803 +  90668790 I
e Puma_concolor.QAVW01001104.1                            20275625 2 -  38429054 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         41871 11 +     42204 I
e Psammomys_obesus.NESX01036370.1                            12264 4 -     21651 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Peromyscus_maniculatus.KI615324.1                       18196650 5 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13966 2 -     78924 I
e Panthera_tigris.KE722367.1                               4722555 2 -   8748460 I
e Panthera_pardus.KV860321.1                                265675 2 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  152466 2 +    230217 I
e Otocyon_megalotis.JAEUCK010005147.1                       465313 11 -    559221 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Onychomys_torridus.OnyTor_scaffold_2986                    82023 5 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   27021 4 +     28053 I
e Odocoileus_virginianus.KZ100018.1                         145852 291 +    630418 I
e Odobenus_rosmarus.KB229312.1                              508013 11 -   2017862 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869 0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414 0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947 0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9151889 11 -   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                20308871 11 +  31847680 I
e Nannospalax_galili.KL204047.1                            2036805 5 -   3037898 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190536 0 +    196477 C
e Mustela_putorius.JH418006.1                               303058 11 -  14710649 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398 7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7278 11 -      8324 I
e Microtus_ochrogaster.CM001695.1                         11262363 4 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184080 4 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 34623 4 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365             11669 11 +     13704 I
e Megaderma_lyra.MegLyr_scaffold_4542                        14651 0 -    207569 C
e Manis_pentadactyla.KN006162.1                              51578 5 -    317179 I
e Manis_javanica.JSZB01003497.1                              19560 5 +    737560 I
e Lycaon_pictus.CM007581.1                                17957957 11 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Leptonychotes_weddellii.KB714746.1                       3044410 11 +   3914936 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  46347 2 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_101188                404 0 +      9903 C
e Hipposideros_armiger.JXIK01000431.1                       111834 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Helogale_parvula.HelPar_flattened_line_2585               243645 12 +    327341 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689 0 +     41679 C
e Felis_nigripes.FelNig_flattened_line_20823                 10858 2 -     36744 I
e Felis_catus_fca126.CM031415.1                           20197104 2 + 205367284 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Enhydra_lutris.KZ291758.1                               16330957 11 -  41312741 I
e Ellobius_talpinus.LOJH01081419.1                            2300 4 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          22380 4 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64769 0 +   2246927 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             29806 15 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_37019               4143 0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11668671 0 + 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_18520                 51876 8 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           1799 0 +     23735 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1750 0 -      8501 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Canis_lupus_orion.HG994398.1                            18503019 11 +  63665305 I
e Canis_lupus_familiaris.chr16                            17961717 11 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9037248 11 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     2546 11 -     43241 I
e CanFam4.chr16                                           17801805 11 -  60362399 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538 0 +      5281 C
e Ailurus_fulgens.LNAC01001112.1                             81008 11 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9511928 11 -  29979442 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     72614 5 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           828618 2 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      10044 43 +     62944 TA-A---T-T--G--------A------------TAAT---TT--T---------AGATT----AATATAT----C--------G-ATAGAT---T-AT---AA-----AAT-----A
s Acinonyx_jubatus.LLWD01001279.1                           828620 32 -   1699592 ta-a---t-t--a---aaa--a------------t------ta-at---------a------------tat----g--------g---agat---t-gg---ca-----a-------a
i Acinonyx_jubatus.LLWD01001279.1                        I 2 I 4
s Acomys_cahirinus.AcoCah_scaffold_12655                     72619 10 +     87051 --------------------------------------------------------------------------------------------------C---TACCTATG-------A
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 5 I 4
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511939 30 -  29979442 ta-a---t-g--a---aa--caccaggtaacaatt------ta-aa---------a------------tg------------------------------------------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 11 I 14
s Ailurus_fulgens.LNAC01001112.1                             81019 30 -    347723 ta-a---t-g--t---aa--caccaggtgataatt------ta-aa---------a------------tg------------------------------------------------
i Ailurus_fulgens.LNAC01001112.1                         I 11 I 14
s Allactaga_bullata.AllBul_scaffold_9566                     75698  7 -     89534 ---------------------A------------T------TTA-T---------A--------------------------------------------------------------
i Allactaga_bullata.AllBul_scaffold_9566                 I 6 I 24
s Allenopithecus_nigroviridis.k141_3361533                   17913 41 -     52922 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----AATAAAT----T--------G-ATAGAT---T-AT---AA-----A-------A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         17848 41 -     28001 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----AATAAAT----T--------G-ATAGAT---T-AT---AA-----A-------A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8343 41 -     18505 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----AATAAAT----T--------G-ATAGAT---T-AT---AA-----A-------A
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9196 41 -     12518 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----AATAAAT----T--------G-ATAGAT---T-AT---AA-----A-------A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              9666 33 +     51355 TA-A---T-T--G-----ATAA------------T------TT--T---------A------------TAT----T--------A-ATAGAT---T-AT---CA-----A-------A
i Alouatta_belzebul.k141_3560514                         C 0 I 2
s Alouatta_caraya.k141_1701091                                2771 33 -     36483 TA-A---T-T--G-----ATAA------------T------TT--T---------A------------TAT----T--------A-ATAGAT---T-AT---CA-----A-------A
i Alouatta_caraya.k141_1701091                           C 0 I 2
s Alouatta_discolor.k141_566626                              13228 33 +     28687 TA-A---T-T--G-----ATAA------------T------TT--T---------A------------TAT----T--------A-ATAGAT---T-AT---CA-----A-------A
i Alouatta_discolor.k141_566626                          C 0 I 2
s Alouatta_juara.k141_1302312                                 1696 33 +     27940 TA-A---T-T--G-----ATAA------------T------TT--T---------A------------TAT----T--------A-ATAGAT---T-AT---CA-----A-------A
i Alouatta_juara.k141_1302312                            C 0 I 2
s Alouatta_macconnelli.k141_918386                            2775 33 -      9457 TA-A---T-T--G-----ATAA------------T------TT--T---------A------------TAT----T--------A-ATAGAT---T-AT---CA-----A-------A
i Alouatta_macconnelli.k141_918386                       C 0 I 2
s Alouatta_nigerrima.k141_1929159                             1733 33 +     30492 TA-A---T-T--G-----ATAA------------T------TT--T---------A------------TAT----T--------A-ATAGAT---T-AT---CA-----A-------A
i Alouatta_nigerrima.k141_1929159                        C 0 I 2
s Alouatta_palliata.k141_2135620                              5729 17 +     47717 TA-A---T-T--G-----ATAA------------T------TT--T---------A------------TA------------------------------------------------
i Alouatta_palliata.k141_2135620                         C 0 I 15
s Alouatta_puruensis.k141_362188                              2463 33 +      5663 TA-A---T-T--G-----ATAA------------T------TT--T---------A------------TAT----T--------A-ATAGAT---T-AT---CA-----A-------A
i Alouatta_puruensis.k141_362188                         C 0 I 2
s Alouatta_seniculus.k141_117119                             16915 33 +     50774 TA-A---T-T--G-----ATAA------------T------TT--T---------A------------TAT----T--------A-ATAGAT---T-AT---CA-----A-------A
i Alouatta_seniculus.k141_117119                         C 0 I 2
s Ammotragus_lervia.NIVO01071767.1                          677065 36 -   2318259 ta-g---t-tataat-aaa--a------------t------ta-ac---------a------------caT----T--------G---AGAt---t-gg---tg-----a-------a
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 4
s Anoura_caudifer.AnoCau_scaffold_1412                      186701 31 +    412891 AT-A---T-T--A------AAA------------T------TA-GT---------A------------TAT----T--------G---AGAT---T-GC---TA-----A-------A
i Anoura_caudifer.AnoCau_scaffold_1412                   I 4 I 4
s Antilocapra_americana.AntAmePen_scaffold_12469             99548 17 -    100397 TA-G---T-TATA---ATAAAA------------T------TA---------------------------------------------------------------------------
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 I 17
s Aplodontia_rufa.AprRuf_scaffold_68852                      13963 25 +     20879 TA-A---T-T--T-----TAGA------------T------AAA-T---------C------------TAT----G--------G-ATAG----------------------------
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 6
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6107 31 +     43469 AT-A---T-T--A------AAA------------T------CAA-T---------A------------TAC----T--------G---AGAT---T-GC---TG-----A-------A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 4 I 4
s Ateles_geoffroyi_b.tarseq_1536                             21209925 33 -  21539123 ta-a---t-t--gat-a----a------------t------tt--t---------a------------tat----t--------a-atagat---t-at---aA-----A-------A
i Ateles_geoffroyi_b.tarseq_1536                            C 0 I 4
s Ateles_belzebuth.k141_445860                               44721 33 -     48001 ta-a---t-t--gat-a----a------------t------tt--t---------a------------tat----t--------a-atagat---t-at---aA-----A-------A
i Ateles_belzebuth.k141_445860                           C 0 I 4
s Ateles_chamek.k141_1806455                                 27525 33 -     30947 ta-a---t-t--gat-a----a------------t------tt--t---------a------------tat----t--------a-atagat---t-at---aA-----A-------A
i Ateles_chamek.k141_1806455                             C 0 I 4
s Ateles_geoffroyi_a.k141_833924                                9297 33 -     89868 ta-a---t-t--gat-a----a------------t------tt--t---------a------------tat----t--------a-atagat---t-at---aA-----A-------A
i Ateles_geoffroyi_a.k141_833924                           C 0 I 4
s Ateles_marginatus.k141_803263                              13681 33 -     40414 ta-a---t-t--gat-a----a------------t------tt--t---------a------------tat----t--------a-atagat---t-at---aA-----A-------A
i Ateles_marginatus.k141_803263                          C 0 I 4
s Ateles_paniscus.k141_457735                                21570 33 +     72325 TA-A---T-T--G-----ATAA------------T------TT--T---------A------------TAT----T--------A-ATAGAT---T-AT---AA-----A-------A
i Ateles_paniscus.k141_457735                            C 0 I 4
s Balaenoptera_acutorostrata.KI537508.1                   15193106 32 +  23207421 ta-a---t-t--a---aaa--a------------t------ta-at---------a------------tat----t--------g---agat---t-ga---tg-----a-------a
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 4
s Balaenoptera_bonaerensis.DF707048.1                         3571 32 -     18090 ta-a---t-t--a---aaa--a------------t------ta-at---------a------------tat----t--------g---agat---t-ga---tg-----a-------a
i Balaenoptera_bonaerensis.DF707048.1                    C 0 I 4
s Beatragus_hunteri.BeaHun_scaffold_50177                    28152 36 +     34529 TA-G---T-TATA---ATAAAA------------T------TAA-C---------A------------CAT----T--------G---AGAT---T-GA---TG-----A-------A
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 4
s Bison_bison.KN261452.1                                    201709 39 -    288883 ta-t---t-tatatttaaaata------------t------aa-at---------a------------tat----t--------a---agca---a-TC---TC-----A-------A
i Bison_bison.KN261452.1                                 C 0 I 4
s Bos_indicus.CM003047.1                                  20274892 39 +  48749331 ta-t---t-tatatttaaaata------------t------aa-at---------a------------tat----t--------a---agca---a-TC---TC-----A-------A
i Bos_indicus.CM003047.1                                 C 0 I 4
s Bos_mutus.JH880303.1                                     1127444 39 -   1948126 ta-t---t-tatatttaaaata------------t------aa-at---------a------------tat----t--------a---agca---a-TC---TC-----A-------A
i Bos_mutus.JH880303.1                                   C 0 I 4
s Bos_taurus.CM000203.6                                   18085530 39 +  45695690 ta-t---t-tatatttaaaata------------t------aa-at---------a------------tat----t--------a---agca---a-TC---TC-----A-------A
i Bos_taurus.CM000203.6                                  C 0 I 4
s Bubalus_bubalis.KI419123.1                               2821487 36 +   4408762 TA-G---t-tataat-aaa--a------------t------ta-ac---------a------------cat----t--------G---AGAt---t-ga---tt-----a-------a
i Bubalus_bubalis.KI419123.1                             I 278 I 4
s Cacajao_ayresi.k141_552049                                102547 33 -    122966 TA-A---T-T--G-----ATAA------------T------TT--T---------A------------TAT----T--------A-ATAGAT---G-AT---AA-----A-------A
i Cacajao_ayresi.k141_552049                             C 0 I 4
s Cacajao_calvus.k141_5142                                   62052 33 +     81800 TA-A---T-T--G-----ATAA------------T------TT--T---------A------------TAT----T--------A-ATAGAT---G-AT---AA-----A-------A
i Cacajao_calvus.k141_5142                               C 0 I 4
s Cacajao_hosomi.k141_81245                                  31232 33 -     95584 TA-A---T-T--G-----ATAA------------T------TT--T---------A------------TAT----T--------A-ATAGAT---G-AT---AA-----A-------A
i Cacajao_hosomi.k141_81245                              C 0 I 4
s Cacajao_melanocephalus.k141_619699                         55333 33 -    119600 TA-A---T-T--G-----ATAA------------T------TT--T---------A------------TAT----T--------A-ATAGAT---G-AT---AA-----A-------A
i Cacajao_melanocephalus.k141_619699                     C 0 I 4
s Camelus_bactrianus.KN276810.1                           10003782 20 -  17673402 ta-t---a-t--at--aa---a------------a------ga-at---------a------------cat----a------------------------------------------
i Camelus_bactrianus.KN276810.1                          C 0 I 9
s Camelus_dromedarius.KN272107.1                           2336254 20 -   7040546 ta-t---a-t--at--aa---a------------a------ga-at---------a------------cat----a------------------------------------------
i Camelus_dromedarius.KN272107.1                         C 0 I 9
s Camelus_ferus.KB017975.1                                  404552 20 -   1652518 ta-t---a-t--at--aa---a------------a------ga-at---------a------------cat----a------------------------------------------
i Camelus_ferus.KB017975.1                               C 0 I 9
s CanFam4.chr16                                           17801816 29 -  60362399 ta-a---c-g--a---aa--tgccag-tgataatt------ta-aa---------a------------tg------------------------------------------------
i CanFam4.chr16                                          I 11 I 14
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     2557 29 -     43241 ta-a---c-g--a---aa--tgccag-tgataatt------ta-aa---------a------------tg------------------------------------------------
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 11 I 14
s Canis_lupus_dingo.QKWQ01000480.1                         9037259 29 -   9314153 ta-a---c-g--a---aa--tgccag-tgataatt------ta-aa---------a------------tg------------------------------------------------
i Canis_lupus_dingo.QKWQ01000480.1                       I 11 I 14
s Canis_lupus_familiaris.chr16                            17961728 29 -  59632846 ta-a---c-g--a---aa--tgccag-tgataatt------ta-aa---------a------------tg------------------------------------------------
i Canis_lupus_familiaris.chr16                           I 11 I 14
s Canis_lupus_orion.HG994398.1                            18503030 29 +  63665305 ta-a---c-g--a---aa--tgccag-tgataatt------ta-aa---------a------------tg------------------------------------------------
i Canis_lupus_orion.HG994398.1                           I 11 I 14
s Capra_aegagrus.CM003241.1                               18831189 23 +  46296322 ---------------------a------------t------ta-ac---------a------------cat----t--------g---agat---t-ga---tg-----a-------a
i Capra_aegagrus.CM003241.1                              I 10 I 4
s Capra_hircus.CM004588.1                                 18061909 23 -  44709034 ---------------------a------------t------ta-ac---------a------------cat----t--------g---aGAt---t-ga---tg-----a-------a
i Capra_hircus.CM004588.1                                I 10 I 4
s Capromys_pilorides.CapPil_scaffold_65020                    2275 43 -     12242 ---A---T-T--T-----AAAG------------T------TA-GT---------A------------GCT----TGTTGA-GTA-T-------GT-GCTTATA-----A--ATGACA
i Capromys_pilorides.CapPil_scaffold_65020               I 1 I 2
s Carlito_syrichta.NW_007259797.1                           156625 20 -    496798 ---------------------------------------------T---------A------------TAT----T--------G-GTAGAT---T-GT---CA-----A-------A
i Carlito_syrichta.NW_007259797.1                        I 12 I 4
s Carollia_perspicillata.CarPer_scaffold_92756                6449 31 -     11696 AT-A---T-T--A------AAA------------T------TAA-C---------A------------TAC----T--------G---AGAT---T-GC---TA-----A-------A
i Carollia_perspicillata.CarPer_scaffold_92756           I 4 I 4
s Castor_canadensis.CasCan_scaffold_2074                    138615 17 +    179628 TC-A---T-T--T------ATA------------T------TA-TT---------T------------TA------------------------------------------------
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 5
s Catagonus_wagneri.CatWag_scaffold_2839                     94905 32 +    217609 TA-A---T-T--G-----AAAA------------T------TAA-T---------A------------TAT----T--------G---AGAT---T-GA---TG-----A-------A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 4
s Cephalopachus_bancanus.k141_1423433                         6123 20 +     31688 ---------------------------------------------T---------A------------TAT----T--------G-GTAGAT---T-GT---CA-----A-------A
i Cephalopachus_bancanus.k141_1423433                    I 12 I 4
s Cercocebus_atys.KQ010504.1                               4478874 41 +   4669795 ta-a---t-t--g---a--TAA------------T------TT--T---------AGATT----AATATAT----T--------G-ATAGAT---T-AT---AA-----A-------A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3368 41 +     17872 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----AATATAT----T--------G-ATAGAT---T-AT---AA-----A-------A
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           3963 41 -     14043 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----AATATAT----T--------G-ATAGAT---T-AT---AA-----A-------A
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12058 41 +     27781 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----CATATAT----T--------G-ATAGAT---T-AT---AA-----A-------A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12208 41 -     20310 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----A----ATNNNNT--------G-ATAGAT---T-AT---AA-----A-------A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15188 41 +     29689 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----A----ATNNNNT--------G-ATAGAT---T-AT---AA-----A-------A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            9944 41 -     20078 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----A----ATNNNNT--------G-ATAGAT---T-AT---AA-----A-------A
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          17859 41 -     27936 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----A----ATNNNNT--------G-ATAGAT---T-AT---AA-----A-------A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            6726 41 -     17152 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----A----ATNNNNT--------G-ATAGAT---T-AT---AA-----A-------A
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826458 41 +  39242232 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----A----ATNNNNT--------G-ATAGAT---T-AT---AA-----A-------A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21225962 41 -  21565898 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----A----ATNNNNT--------G-ATAGAT---T-AT---AA-----A-------A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43081 41 -     53127 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----A----ATNNNNT--------G-ATAGAT---T-AT---AA-----A-------A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3331 41 +     13442 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----A----ATNNNNT--------G-ATAGAT---T-AT---AA-----A-------A
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       17877 41 -     27947 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----A----ATNNNNT--------G-ATAGAT---T-AT---AA-----A-------A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                          906 41 +     10558 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----A----ATNNNNT--------G-ATAGAT---T-AT---AA-----A-------A
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          3911 41 +     14005 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----A----ATNNNNT--------G-ATAGAT---T-AT---AA-----A-------A
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1155 32 -     17098 TA-A---T-T--G-----ATAA------------T------TT--T---------A------------TAT----T--------A-ATAGAT---T-AT---AA-----A--------
i Cheracebus_lucifer.k141_49986                          C 0 I 3
s Cheracebus_lugens.k141_1393925                              1031 32 +     17877 TA-A---T-T--G-----ATAA------------T------TT--T---------A------------TAT----T--------A-ATAGAT---T-AT---AA-----A--------
i Cheracebus_lugens.k141_1393925                         C 0 I 3
s Cheracebus_regulus.k141_471822                            158598 32 -    216457 TA-A---T-T--G-----ATAA------------T------TT--T---------A------------TAT----T--------A-ATAGAT---T-AT---AA-----A--------
i Cheracebus_regulus.k141_471822                         C 0 I 3
s Cheracebus_torquatus.k141_1170026                          63073 32 +     76511 TA-A---T-T--G-----ATAA------------T------TT--T---------A------------TAT----T--------A-ATAGAT---T-AT---AA-----A--------
i Cheracebus_torquatus.k141_1170026                      C 0 I 3
s Chinchilla_lanigera.JH722012.1                           1254203 45 +   2543920 ta-a---t-t--t---aaa--t------------t------ta-gg---------a------------GCT----TGTT-AAATA-T-------GT-GCTTATA-----G--ataaca
i Chinchilla_lanigera.JH722012.1                         C 0 I 2
s Chiropotes_israelita.k141_747660                           99676 33 +    146308 TA-A---T-T--T-----ATAA------------T------TT--T---------C------------TAT----T--------A-ATAGAT---T-AT---AA-----A-------A
i Chiropotes_israelita.k141_747660                       C 0 I 4
s Chiropotes_sagulatus.k141_1421488                          31484 33 -     50570 ta-a---t-t--tat-a----a------------t------tt--t---------c------------tat----t--------a-atagat---t-at---aa-----A-------A
i Chiropotes_sagulatus.k141_1421488                      C 0 I 4
s Chlorocebus_aethiops.ctg25                              18431781 41 -  18827391 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATTAATAAAT--------T--------G-ATAGAT---T-AT---AA-----A-------A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18282 37 -     50209 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----AAT--------T--------G-ATAGAT---T-AT---AA-----A-------A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425286 37 + 135778131 tA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----AAT--------T--------G-ATAGAT---T-AT---AA-----A-------A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1913787 41 +   2368649 ta-a---t-t--aat-a----a------------t------tt--t---------agatT----AATATAT----T--------G-ATAGAT---T-AT---AA-----A-------A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952031 41 + 200372422 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----AATATAT----T--------G-ATAGAT---T-AT---AA-----A-------A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40312 41 +     84244 TA-A---T-T--A-----ATAA------------T------TT--T---------AGATT----AATATAT----T--------G-ATAGAT---T-AT---AA-----A-------A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 51884  1 +     63868 ---------------------------------------------------------------------------------------------------------------------A
i Cricetomys_gambianus.CriGam_scaffold_18520             I 8 I 4
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29821 18 -     87169 ---------------------------------------------T---------A------------TAT----T--------G---AGAT---T-GG---TA-----A-------A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 15 I 2
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37249 21 +     51376 --------------------------------------------------------------------GGT----TGATGAA-TA-G-------GT-GCTTAT---------------
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 16 I 10
s Condylura_cristata.JH655891.1                           17549346 11 -  53390261 ta-G---T-T--A-----AAAA------------T-----------------------------------------------------------------------------------
i Condylura_cristata.JH655891.1                          C 0 I 21
s Delphinapterus_leucas.KZ290073.1                        16812744 32 +  35494412 ta-a---t-t--a---aa--ta------------t------ta-at---------a------------tat----t--------g---agAT---T-Ta---tg-----a-------g
i Delphinapterus_leucas.KZ290073.1                       C 0 I 6
s Desmodus_rotundus.KZ672289.1                             8631451 28 +  20541912 at-a---t-t--a---aa---a------------t------ta-at---------a------------tat----t--------c---agAT---T-GC---T---------------
i Desmodus_rotundus.KZ672289.1                           I 4 I 3
s Dinomys_branickii.DinBra_scaffold_21862                    37690 46 +     67921 TA-A---T-T--T-----GAAG------------T------TA-GT---------C------------ACT----TGTTTAAATA-T-------GT-GCTTATA-----G--ATGACA
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 2
s Elaphurus_davidianus.JRFZ01104969.1                       312224 36 +    607251 ta-g---t-tataat-aaa--a------------t------ta-ac---------a------------cat----t--------g---agat---t-ga---tg-----a-------a
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 4
s Ellobius_lutescens.LOEQ01008920.1                          22384 10 -    110024 --------------------------------------------------------------------------------------------------c---tacctata-------g
i Ellobius_lutescens.LOEQ01008920.1                      I 4 I 4
s Ellobius_talpinus.LOJH01081419.1                            2304 10 +      8657 --------------------------------------------------------------------------------------------------c---tacctata-------g
i Ellobius_talpinus.LOJH01081419.1                       I 4 I 4
s Enhydra_lutris.KZ291758.1                               16330968 30 -  41312741 ta-a---t-g--a---aa--caccaagtgactgtt------ta-ca---------a------------tg------------------------------------------------
i Enhydra_lutris.KZ291758.1                              I 11 I 32
s Eptesicus_fuscus.JH977646.1                              2147936 32 -  14770903 tt-t---t-a--a---aaa--a------------N------NN-NN---------N------------NNN----N--------N---NNNN---N-NN---NN-----N-------N
i Eptesicus_fuscus.JH977646.1                            I 4 I 4
s Erythrocebus_patas.Contig38                             21208454 41 -  21539334 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----AATAAAT----T--------G-ATAGAT---T-AT---AA-----A-------A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12418 32 +    133382 TA-A---T-T--A-----AAAA------------T------TAA-T---------A------------TAT----T--------G---AGAT---T-GA---TG-----A-------A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 4
s Eubalaena_japonica.EubJap_flattened_line_31514             26371 32 -     44125 TA-A---T-T--A-----AAAA------------T------TAA-T---------A------------TAT----T--------G---AGAT---T-GA---TG-----A-------A
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 I 4
s Felis_catus.CM001381.2                                  20238263 32 + 206538554 ta-a---t-t--a---aaa--a------------t------ta-at---------a------------tat----t--------g---agat---t-gg---ca-----a-------a
i Felis_catus.CM001381.2                                 I 2 I 4
s Felis_catus_fca126.CM031415.1                           20197106 32 + 205367284 ta-a---t-t--a---aaa--a------------t------ta-at---------a------------tat----t--------g---agAT---T-gg---ca-----a-------a
i Felis_catus_fca126.CM031415.1                          I 2 I 4
s Felis_nigripes.FelNig_flattened_line_20823                 10860 32 -     36744 TA-A---T-T--A-----AAAA------------T------TAA-T---------A------------TAT----T--------G---AGAT---T-GG---CA-----A-------A
i Felis_nigripes.FelNig_flattened_line_20823             I 2 I 4
s Fukomys_damarensis.KN121974.1                             851713 45 +   3816255 TA-T---T-T--T-----TAAG------------T------TA-GT---------A------------GTT----TATT-AAATA-T-------GT-GCTTTTT-----G--ATGACA
i Fukomys_damarensis.KN121974.1                          C 0 I 2
s Galeopterus_variegatus.GalVar_scaffold_108840               2834 34 -      9135 TA-C---A-T--T-----TAAA------------T------TAA-T---------A------------TAT----T--------G-ATGGAT---T-AT---TT-----A-------A
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 I 4
s Giraffa_tippelskirchi.LVKQ01S007888.1                     610183 36 -    660261 ta-g---t-tataat-aaa--a------------t------ta-ac---------a------------caa----t--------g---agat---t-ga---tg-----a-------a
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 I 4
s Glis_glis.GliGli_scaffold_19807                            32251 34 +     49224 TA-A---T-T--T-----AAAA------------T------TAA-T---------A------------TAT----T--------G-ACAGAT---T-GT---TA-----G-------A
i Glis_glis.GliGli_scaffold_19807                        C 0 I 2
s Gorilla_beringei.k141_3596273                              19286 46 -     32273 TA-A---T-T--G-----ATAA------------TAAT---TT--T---------AGATT----AATATAT----T--------G-ATAGAT---T-AT---AA-----AAT-----A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341422 46 + 186649187 ta-a---t-t--G-----ATAA------------TAAT---TT--T---------AGATT----AATATAT----T--------G-atagat---t-at---aa-----aat-----a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33946 17 +     78134 ---------------------------------------------------------------------TT----T--------G-ATAGAT---T-GC---TA-----G-------A
i Graphiurus_murinus.GraMur_scaffold_10447               I 1 I 2
s Helogale_parvula.HelPar_flattened_line_2585               243657 18 +    327341 ---------------------------------------------T---------A------------TAT----T--------G---AGAT---T-GG---TG-----A-------A
i Helogale_parvula.HelPar_flattened_line_2585            I 12 I 4
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 19398 23 +     36099 ---------------------A------------T------TAA-C---------A------------CAT----T--------G---AGAT---T-GA---TG-----A-------A
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 10 I 4
s Heterocephalus_glaber.JH602082.1                        20663501 45 +  22651954 ta-t---t-t--t---aaa--g------------t------ta-gt---------a------------GCT----T-TTTAAATA-T-------GT-GCTTATA-----G--ATGACA
i Heterocephalus_glaber.JH602082.1                       C 0 I 2
s Hoolock_leuconedys.ctg274                                    438084 44 +    630532 TA-A---T-T--G-----ATAA------------T---AATTT--T---------AGATT----AATATAT----T--------G-ATACAT---T-AT---AA-----A-------A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46349 31 +     55795 TA-A---T-T--A------AAA------------T------TAA-T---------A------------TAT----T--------G---AGAT---T-GG---TA-----A-------A
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 2 I 4
s Hystrix_cristata.HysCri_scaffold_5660                      84392 45 +    135385 TA-A---T-T--T-----AAAC------------G------TAA-T---------A------------GCT----T--------A-TTAAATACAT-ACTTATA-----C--ATAACA
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 2
s Ictidomys_tridecemlineatus.JH393364.1                    7522304 32 -   7955117 ---a---t-t--T-----TAGA------------C------TAA-T---------A------------TAT----T--------G-ATAGAT---T-gc---ta-----a-------a
i Ictidomys_tridecemlineatus.JH393364.1                  I 1 I 2
s Inia_geoffrensis.IniGeo_flattened_line_48101               23950 14 +     23964 TA-A---T-T--A------AAA------------T------TAA-T------------------------------------------------------------------------
i Inia_geoffrensis.IniGeo_flattened_line_48101           C 0 N 0
s Jaculus_jaculus.JH725527.1                               8278434  7 -   9596543 ---------------------a------------t------tt-aa---------a--------------------------------------------------------------
i Jaculus_jaculus.JH725527.1                             I 6 I 24
s Kogia_breviceps.KogBre_flattened_line_192630                3325 17 -      3359 TA-A---T-T--A-----AAAA------------T------TA-GT---------A------------T-------------------------------------------------
i Kogia_breviceps.KogBre_flattened_line_192630           C 0 I 16
s Lagothrix_lagothricha.k141_1005387                         15731 32 -     38430 ta-a---t-t--gat-a----a------------t------tt--t---------a------------tat----t--------a-atagat---t-at---aa-----A--------
i Lagothrix_lagothricha.k141_1005387                     C 0 I 3
s Lasiurus_borealis.LasBor_scaffold_32767                    17704 32 -     42476 AT-A---T-T--A-----AAAA------------T------TAA-T---------A------------TTT----T--------G---AGGT---T-GA---CA-----A-------A
i Lasiurus_borealis.LasBor_scaffold_32767                I 4 I 4
s Leptonychotes_weddellii.KB714746.1                       3044421 30 +   3914936 ta-a---t-g--a---aa--caccaggtgacaatt------ta-aa---------a------------tg------------------------------------------------
i Leptonychotes_weddellii.KB714746.1                     I 11 I 14
s Lepus_americanus.LepAme_scaffold_107385                     8098 36 -     14121 TA-A---C-A--T-----TAGA------------T------TAA-T--AATGAAAA------------TGT----T--------AAATATGT---A----------------------
i Lepus_americanus.LepAme_scaffold_107385                I 1 I 6
s Lipotes_vexillifer.KE559953.1                             269009 32 -    662738 ta-a---t-t--a---aaa--a------------t------ta-at---------a------------tat----t--------g---agAA---T-Ga---tg-----a-------g
i Lipotes_vexillifer.KE559953.1                          C 0 I 4
s Lophocebus_aterrimus.ctg367                              1440416 41 +   1826925 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----AATATAT----T--------G-ATAGAT---T-AT---AA-----A-------A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17957968 29 -  59628241 ta-a---c-g--a---aa--tgccag-tgacaatt------tt-aa---------a------------tg------------------------------------------------
i Lycaon_pictus.CM007581.1                               I 11 I 14
s Macaca_arctoides.k141_2326796                              10226 41 +     40492 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----AATATAT----T--------G-ATAGAT---T-AT---AA-----A-------A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679480 41 +  60120075 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----AATATAT----T--------G-ATAGAT---T-AT---AA-----A-------A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 15997 41 -     26193 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----AATATAT----T--------G-ATAGAT---T-AT---AA-----A-------A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            83773 41 -    114318 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----AATATAT----T--------G-ATAGAT---T-AT---AA-----A-------a
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9464 41 -     23192 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----AATATAT----T--------G-ATAGAT---T-AT---AA-----A-------A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                18928 41 -     29190 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----AATATAT----T--------G-ATAGAT---T-AT---AA-----A-------A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27506 41 +     37952 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----AATATAT----T--------G-ATAGAT---T-AT---AA-----A-------A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842583 41 + 187317192 ta-a---t-t--g---a--TAA------------T------TT--T---------AGATT----AATATAT----T--------G-ATAGAT---T-AT---AA-----A-------A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461161 41 -  25927173 ta-a---t-t--gat-a----A------------T------TT--T---------AGATT----AATATAT----T--------G-ATAGAT---T-AT---AA-----A-------A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83362 41 +     89720 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----AATATAT----T--------G-ATAGAT---T-AT---AA-----A-------A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10355 41 +     20474 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----AATATAT----T--------G-ATAGAT---T-AT---AA-----A-------A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10152 41 -     14993 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----AATATAT----T--------G-ATAGAT---T-AT---AA-----A-------A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333014 41 -    668171 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----AATATAT----T--------G-ATAGAT---T-AT---AA-----A-------A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8464 41 -     24072 ta-a---t-t--gat-a----a------------t------tt--t---------agatt----aatatat----t--------g-atagat---t-at---aa-----A-------A
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29095 41 -     45290 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----AATATAT----T--------G-ATAGAT---T-AT---AA-----A-------A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 91987 33 +     94391 TTAA---T-T--A-----AAAC------------T------TAA-T---------A------------TAT----T--------G---AGAT---T-GC---TA-----A-------A
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 4 I 4
s Mandrillus_leucophaeus.scaffold280                      23940683 41 -  24302211 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----AATATAT----T--------G-ATAGAT---T-AT---AA-----A-------A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354799 41 +    752769 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----AATATAT----T--------G-ATAGAT---T-AT---AA-----A-------a
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              19565 26 +    737560 ------------a--gaa---g------------t------ga-aa---------g------------tgt----a--------a---ag-t---t-tg---ta-----a-------a
i Manis_javanica.JSZB01003497.1                          I 5 I 3
s Manis_pentadactyla.KN006162.1                              51583 26 -    317179 ------------a--gaa---g------------t------ga-aa---------g------------tgt----a--------a---ag-t---t-tg---ta-----a-------a
i Manis_pentadactyla.KN006162.1                          I 5 I 3
s Marmota_marmota.CZRN01000018.1                          33104586 32 -  40650429 ---A---T-T--T-----TAGA------------C------TAA-T---------A------------TGT----T--------G-ATAGAT---A-Gc---ta-----a-------a
i Marmota_marmota.CZRN01000018.1                         I 1 I 2
s Meriones_unguiculatus.MerUng_scaffold_7390                 34627 10 +    140813 --------------------------------------------------------------------------------------------------C---TACCTATA-------A
i Meriones_unguiculatus.MerUng_scaffold_7390             I 4 I 4
s Mesocricetus_auratus.KB708134.1                         12184084 10 -  29670104 --------------------------------------------------------------------------------------------------C---TACCTATG-------g
i Mesocricetus_auratus.KB708134.1                        I 4 I 4
s Mellivora_capensis.MelCap_flattened_line_69365             11680 30 +     13704 ta-a---t-g--a---aa--caccaggtgacagtt------ta-aa---------a------------tg------------------------------------------------
i Mellivora_capensis.MelCap_flattened_line_69365         I 11 I 39
s Mesoplodon_bidens.MesBid_scaffold_108144                    4624 35 +     10310 TA-ATACT-T--A-----AAAA------------T------TAA-T---------A------------TAT----T--------G---AGAT---T-GA---TG-----A-------A
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 I 4
s Micronycteris_hirsuta.MicHir_scaffold_52381                17198 31 -     19307 AT-A---T-T--A------ATA------------T------TAA-T---------A------------TAC----T--------G---AGAT---T-GC---TA-----A-------A
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 4 I 4
s Microtus_ochrogaster.CM001695.1                         11262367 10 -  27267610 --------------------------------------------------------------------------------------------------c---tacctatg-------g
i Microtus_ochrogaster.CM001695.1                        I 4 I 4
s Miniopterus_natalensis.LDJU01000034.1                    1851605 32 +   8254450 at-a---t-t--a---aaa--a------------t------ta-at---------a------------tat----t--------g---agat---t-gc---ta-----a-------a
i Miniopterus_natalensis.LDJU01000034.1                  I 4 I 4
s Miniopterus_schreibersii.MinSch_scaffold_18080             35285 32 +     64694 AT-A---T-T--A-----AAAA------------T------TAA-T---------A------------TAT----T--------G---AGAT---T-GC---TA-----A-------A
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 4 I 4
s Miopithecus_ogouensis.k141_534055                          12363 37 -     28506 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----A----AT----T--------G-ATAGAT---T-AT---AA-----A-------A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         7289 30 -      8324 ta-a---t-g--a---aa--caccaggtgacaatt------ta-aa---------a------------tg------------------------------------------------
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 11 I 14
s Monodon_monoceros.MonMon_M_scaffold_103                    28127 32 -    437263 TA-A---T-T--A-----AATA------------T------TAA-T---------A------------TAT----T--------G---AGAT---T-TA---TG-----A-------G
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 6
s Mormoops_blainvillei.MorMeg_scaffold_1417                 143009 18 -    366855 ---------------------------------------------T---------A------------TAT----C--------G---ACAT---T-GT---TA-----A-------A
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 14 I 4
s Moschus_moschiferus.MosMos_scaffold_13123                   2247 36 +     82753 TA-G---T-TATA---ATAAAA------------T------TAA-C---------A------------CAT----T--------G---AGAT---T-GA---TG-----A-------A
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 4
s Mus_caroli.LT608237.1                                   84363014 10 - 120012414 --------------------------------------------------------------------------------------------------C---TTCCTACA-------A
i Mus_caroli.LT608237.1                                  I 5 I 4
s Mus_musculus.chr8                                       87652515 10 - 129401213 --------------------------------------------------------------------------------------------------C---TTCCTACA-------A
i Mus_musculus.chr8                                      I 5 I 4
s Mus_pahari.LT608297.1                                   31357249 10 -  89631738 --------------------------------------------------------------------------------------------------c---tacctatt-------a
i Mus_pahari.LT608297.1                                  I 5 I 4
s Mus_spretus.CM004101.1                                  90755004 10 - 130317789 --------------------------------------------------------------------------------------------------C---TTCCTACA-------A
i Mus_spretus.CM004101.1                                 I 5 I 4
s Mustela_putorius.JH418006.1                               303069 30 -  14710649 ta-a---t-g--a---aa--caccaggtgactatt------ta-aa---------a------------tg------------------------------------------------
i Mustela_putorius.JH418006.1                            I 11 I 32
s Myocastor_coypus.MyoCoy_scaffold_10123                     72473 19 -     80779 ---------------------------------------------T---------A------------GCT----TGTTGAA-TA-T-------GT-GC-------------------
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 11 I 10
s Myotis_brandtii.KE162005.1                                280049 32 -  10118263 at-a---t-t--a---aaa--a------------t------ta-at---------a------------ttt----t--------g---aagt---t-ga---ta-----a-------a
i Myotis_brandtii.KE162005.1                             T 1739 I 4
s Myotis_davidii.KB100139.1                                1589046 32 -   6019432 at-a---t-t--a---aaa--a------------c------ta-at---------a------------ttt----t--------g---aagt---t-ga---ta-----a-------a
i Myotis_davidii.KB100139.1                              I 4 I 4
s Myotis_lucifugus.GL429869.1                              3905145 32 -   4330536 at-a---t-t--a---aaa--a------------t------ta-at---------a------------ttt----t--------g---aagt---t-ga---ta-----a-------a
i Myotis_lucifugus.GL429869.1                            I 4 I 4
s Myotis_myotis.MyoMyo_scaffold_281845                        1298 32 +      1835 AT-A---T-T--A-----AAAA------------T------TAA-T---------A------------TTT----T--------G---AAGT---T-GA---TA-----A-------A
i Myotis_myotis.MyoMyo_scaffold_281845                   I 4 I 4
s Nannospalax_galili.KL204047.1                            2036810  5 -   3037898 --------------------------------------------------------------------------------------------------C---TA-----T-------T
i Nannospalax_galili.KL204047.1                          I 5 I 2
s Nasalis_larvatus.k141_413338                               18417 27 +     21681 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----AATATAT----T------------------------------------------
i Nasalis_larvatus.k141_413338                           C 0 I 10
s Neomonachus_schauinslandi.NINY01007730.1                20308882 30 +  31847680 ta-a---t-g--a---aa--caccaggtgacaatt------ta-aa---------a------------tg------------------------------------------------
i Neomonachus_schauinslandi.NINY01007730.1               I 11 I 14
s Neophocaena_asiaeorientalis.KZ687982.1                   5867105 20 +   7148211 ------------------------------------------a-at---------a------------tat----t--------g---agaT---T-GA---TG-----A-------G
i Neophocaena_asiaeorientalis.KZ687982.1                 I 9 I 4
s Noctilio_leporinus.NocLep_scaffold_251                    759210 15 +    783361 ---------------------------------------------------------------------GC----T--------G---ACAT---T-GA---TA-----A-------A
i Noctilio_leporinus.NocLep_scaffold_251                 I 18 I 2
s Nyctereutes_procyonoides.CAJHUB010000658.1               9151900 29 -   9404916 ta-a---c-a--a---aa--tgccag-tgataatt------ta-aa---------a------------tg------------------------------------------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 11 T 1140
s Ochotona_princeps.JH802162.1                             1365526 36 +   3988456 TA-A---T-T--T-----TATG------------C------CAA-TGTAA-GAAAA------------TGT----T--------A-ATATGT---A----------------------
i Ochotona_princeps.JH802162.1                           I 2 I 6
s Odobenus_rosmarus.KB229312.1                              508024 30 -   2017862 ta-a---t-g--a---aa--catcaggtgacaatt------ta-aa---------a------------tg------------------------------------------------
i Odobenus_rosmarus.KB229312.1                           I 11 I 14
s Okapia_johnstoni.LVCL01S0005463.1                          78099 36 -    150152 TA-G---T-TATA---ATAATA------------T------TAA-C---------A------------CAA----T--------G---AGAt---t-ga---tg-----a-------a
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 4
s Ondatra_zibethicus.OndZib_scaffold_46174                   27025 10 +     28053 --------------------------------------------------------------------------------------------------C---TATCTATG-------G
i Ondatra_zibethicus.OndZib_scaffold_46174               I 4 I 4
s Onychomys_torridus.OnyTor_scaffold_2986                    82028 10 +    102263 --------------------------------------------------------------------------------------------------C---TACCTATG-------G
i Onychomys_torridus.OnyTor_scaffold_2986                I 5 I 4
s Orcinus_orca.KB316932.1                                  2783007 26 -  10937097 ta-a---t-t--a---aa--ta------------t------ta-at---------a------------tat----t--------g---agAT---T----------------------
i Orcinus_orca.KB316932.1                                C 0 I 10
s Oryctolagus_cuniculus.CM000791.1                        67148999 36 + 174332312 ta-a---t-a--tt--a---ga------------t------ta-at-aat-gaaaa------------tgt----t--------aaatatgt---a----------------------
i Oryctolagus_cuniculus.CM000791.1                       I 1 I 6
s Otocyon_megalotis.JAEUCK010005147.1                       465324 29 -    559221 ta-a---c-g--a---aa--tgccag-tgataatt------ta-aa---------a------------tg------------------------------------------------
i Otocyon_megalotis.JAEUCK010005147.1                    I 11 T 1619
s Ovis_aries.CM001607.2                                   17587371 23 +  44047080 ---------------------a------------t------ta-ac---------a------------cat----t--------g---agat---t-ga---tg-----a-------a
i Ovis_aries.CM001607.2                                  I 10 I 4
s Ovis_canadensis.OviCan_scaffold_2572                      175350 36 -    191736 TA-G---T-TATA---ATAAAA------------T------TAA-C---------A------------CAT----T--------G---AGAT---T-GA---TG-----A-------A
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 I 4
s Pan_paniscus.KQ411613.1                                    47387 46 +     80009 ta-a---t-t--g-----ATAA------------TAAT---TT--T---------AGATT----AATATAT----T--------G-atagat---t-at---aa-----aat-----a
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146257 46 + 189151597 ta-a---t-t--g---a--TAA------------TAAT---TT--T---------AGATT----AATATAT----T--------G-atagat---t-at---aa-----aat-----a
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152468 32 +    230217 TA-A---T-T--A-----AAAA------------T------TAA-T---------A------------TAT----T--------G---AGAT---T-GG---CA-----A-------A
i Panthera_onca.PanOnc_flattened_line_3271               I 2 I 4
s Panthera_pardus.KV860321.1                                265677 32 +  18783137 ta-a---t-t--a---aaa--a------------t------ta-at---------a------------tat----t--------g---agat---t-gg---ca-----a-------a
i Panthera_pardus.KV860321.1                             I 2 I 4
s Panthera_tigris.KE722367.1                               4722557 32 -   8748460 ta-a---t-t--a---aaa--a------------t------ta-at---------a------------tat----t--------g---agat---t-gg---ca-----a-------a
i Panthera_tigris.KE722367.1                             I 2 I 4
s Pantholops_hodgsonii.KE114653.1                          1266255 36 -   2937107 ta-g---t-tataat-aaa--a------------t------ta-ac---------a------------cat----t--------G---AGAt---t-ga---tg-----a-------a
i Pantholops_hodgsonii.KE114653.1                        C 0 I 4
s Papio_anubis.CM001495.2                                183446489 41 + 183742232 ta-a---t-t--g---a--TAA------------T------TT--T---------AGATT----AATATAT----T--------G-ATAGAT---T-AT---AA-----A-------A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10139 41 +     20448 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----AATATAT----T--------G-ATAGAT---T-AT---AA-----A-------A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20566947 41 +  20919399 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----AATATAT----T--------G-ATAGAT---T-AT---AA-----A-------a
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   8879 41 +     41871 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----AATATAT----T--------G-ATAGAT---T-AT---AA-----A-------A
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12172 41 +     27711 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----AATATAT----T--------G-ATAGAT---T-AT---AA-----A-------A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3171 41 -     11374 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----AATATAT----T--------G-ATAGAT---T-AT---AA-----A-------A
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13968 32 -     78924 CA-A---T-T--A-----AAAA------------T------TAA-T---------A------------TAT----T--------G---AAAT---T-GA---TA-----A-------A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 2 I 4
s Peromyscus_maniculatus.KI615324.1                       18196655 10 -  18517816 --------------------------------------------------------------------------------------------------c---tacctatg-------g
i Peromyscus_maniculatus.KI615324.1                      I 5 I 4
s Petromus_typicus.PetTyp_scaffold_42190                     29428 45 -     29689 TA-C---T-T--C-----AAAG------------T------AAA-T---------A------------GCT----TGT-AAAATA-A-------GT-GATTATA-----G--ATGACA
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 I 4
s Phocoena_phocoena.PhoPho_flattened_line_24159              10050 32 +     63832 TA-A---T-T--A-----AATA------------T------TAA-T---------A------------TAT----T--------G---AGAT---T-GA---TG-----A-------G
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 4
s Piliocolobus_badius.k141_1142974                            1486 41 +     68526 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----AATATAT----T--------G-ATAGAT---T-AT---AA-----A-------A
i Piliocolobus_badius.k141_1142974                       C 0 I 4
s Piliocolobus_gordonorum.k141_381342                        41632 41 +     89929 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----AATATAT----T--------G-ATAGAT---T-AT---AA-----A-------A
i Piliocolobus_gordonorum.k141_381342                    C 0 I 4
s Piliocolobus_kirkii.k141_448987                            43046 41 +     51399 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----AATATAT----T--------G-ATAGAT---T-AT---AA-----A-------A
i Piliocolobus_kirkii.k141_448987                        C 0 I 4
s Piliocolobus_tephrosceles.PDMG02000141.1                14299283 41 -  14605196 ta-a---t-t--g---a--TAA------------T------TT--T---------AGATT----AATATAT----T--------G-ATAGAT---T-AT---AA-----A-------A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 4
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3078 32 +     22620 AT-A---T-T--A-----AAAA------------T------TAA-T---------A------------TTT----T--------G---AGGT---T-GA---CA-----A-------A
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 4 I 4
s Pithecia_albicans.k141_1476471                              4938 33 +     26961 TA-A---T-T--G-----ATAA------------T------TT--T---------A------------TAT----T--------A-ATAGAT---T-AT---AA-----A-------A
i Pithecia_albicans.k141_1476471                         C 0 I 4
s Pithecia_chrysocephala.k141_839575                          1083 33 +     23417 TA-A---T-T--G-----ATAA------------T------TT--T---------A------------TAT----T--------A-ATAGAT---T-AT---AA-----A-------A
i Pithecia_chrysocephala.k141_839575                     C 0 I 4
s Pithecia_hirsuta.k141_305604                                4930 33 +     29694 TA-A---T-T--G-----ATAA------------T------TT--T---------A------------TAT----T--------A-ATAGAT---T-AT---AA-----A-------A
i Pithecia_hirsuta.k141_305604                           C 0 I 4
s Pithecia_mittermeieri.k141_446740                          29956 33 +     52772 TA-A---T-T--G-----ATAA------------T------TT--T---------A------------TAT----T--------A-ATAGAT---T-AT---AA-----A-------A
i Pithecia_mittermeieri.k141_446740                      C 0 I 4
s Pithecia_pissinattii.k141_1824269                           4952 33 +     26198 TA-A---T-T--G-----ATAA------------T------TT--T---------A------------TAT----T--------A-ATAGAT---T-AT---AA-----A-------A
i Pithecia_pissinattii.k141_1824269                      C 0 I 4
s Pithecia_pithecia.tarseq_165                             3941500 33 +   4542175 TA-A---T-T--G-----ATAA------------T------TT--T---------A------------TAT----T--------A-ATAGAT---T-AT---AA-----A-------A
i Pithecia_pithecia.tarseq_165                           C 0 I 4
s Pithecia_vanzolinii.k141_1697688                            4916 33 -     23490 ta-a---t-t--gat-a----a------------t------tt--t---------a------------tat----t--------a-atagat---t-at---aA-----A-------A
i Pithecia_vanzolinii.k141_1697688                       C 0 I 4
s Plecturocebus_bernhardi.k141_2549090                        9172 33 -     39866 TA-A---T-T--G-----ATAA------------T------TT--T---------A------------TAT----T--------A-ATAGAT---T-AT---AA-----A-------A
i Plecturocebus_bernhardi.k141_2549090                   C 0 I 4
s Plecturocebus_brunneus.k141_1495506                        18338 33 +     34906 TA-A---T-T--G-----ATAA------------T------TT--T---------A------------TAT----T--------A-ATAGAT---T-AT---AA-----A-------A
i Plecturocebus_brunneus.k141_1495506                    C 0 I 4
s Plecturocebus_caligatus.k141_1382851                       22600 33 +     87950 TA-A---T-T--G-----ATAA------------T------TT--T---------A------------TAT----T--------A-ATAGAT---T-AT---AA-----A-------A
i Plecturocebus_caligatus.k141_1382851                   C 0 I 4
s Plecturocebus_cinerascens.k141_1164729                     23429 33 +     88961 TA-A---T-T--G-----ATAA------------T------TT--T---------A------------TAT----T--------A-ATAGAT---T-AT---AA-----A-------A
i Plecturocebus_cinerascens.k141_1164729                 C 0 I 4
s Plecturocebus_cupreus.k141_2351393                          9100 33 +     39403 TA-A---T-T--G-----ATAA------------T------TT--T---------A------------TAT----T--------A-ATAGAT---T-AT---AA-----A-------A
i Plecturocebus_cupreus.k141_2351393                     C 0 I 4
s Plecturocebus_dubius.k141_1058799                          22881 33 -     87928 TA-A---T-T--G-----ATAA------------T------TT--T---------A------------TAT----T--------A-ATAGAT---T-AT---AA-----A-------A
i Plecturocebus_dubius.k141_1058799                      C 0 I 4
s Plecturocebus_grovesi.k141_2013005                         29840 33 +     60166 TA-A---T-T--G-----ATAA------------T------TT--T---------A------------TAT----T--------A-ATAGAT---T-GT---AA-----A-------A
i Plecturocebus_grovesi.k141_2013005                     C 0 I 4
s Plecturocebus_hoffmannsi.k141_3303950                      30037 33 +     67232 TA-A---T-T--G-----ATAA------------T------TT--T---------A------------TAT----T--------A-ATAGAT---T-AT---AA-----A-------A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 I 4
s Plecturocebus_miltoni.k141_349282                          25510 33 +     90634 TA-A---T-T--G-----ATAA------------T------TT--T---------A------------TAT----T--------A-ATAGAT---T-AT---AA-----A-------A
i Plecturocebus_miltoni.k141_349282                      C 0 I 4
s Plecturocebus_moloch.k141_1031110                          22882 33 -     89403 TA-A---T-T--G-----ATAA------------T------TT--T---------A------------TAT----T--------A-ATAGAT---T-GT---AA-----A-------A
i Plecturocebus_moloch.k141_1031110                      C 0 I 4
s Pongo_abelii.NDHI03003595.1                                 5231 42 -     34550 ta-a--tt-t--gat-a----a------------t------tt--t---------agatT----AATATAT----T--------G-Atagat---t-at---aa-----a-------a
i Pongo_abelii.NDHI03003595.1                            I 68 I 78
s Pongo_pygmaeus.ctg66                                     9574012 41 +   9816681 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----AATATAT----T--------G-ATAGAT---T-AT---AA-----A-------A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Psammomys_obesus.NESX01036370.1                            12268 10 -     21651 --------------------------------------------------------------------------------------------------c---tacctata-------a
i Psammomys_obesus.NESX01036370.1                        I 4 I 4
s Presbytis_comata.k141_677006                               76598 27 -     81375 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----AATATAT----T------------------------------------------
i Presbytis_comata.k141_677006                           C 0 I 10
s Presbytis_mitrata.k141_1087752                              8415 27 +     19060 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----AATATAT----T------------------------------------------
i Presbytis_mitrata.k141_1087752                         C 0 I 10
s Pteronotus_parnellii.KE909381.1                            16480 32 -     21811 at-a---t-t--a---aaa--a------------t------ta-at---------a------------tat----t--------g---agat---t-ga---ta-----a-------a
i Pteronotus_parnellii.KE909381.1                        I 4 I 4
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41882 30 +     42204 TA-A---T-G--A-----AACACCAGGTGACTGTT------TAA-A---------A------------TG------------------------------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 11 I 32
s Pteropus_alecto.KB030862.1                              22978080 33 +  28871421 NNNN---N-N--N-----NNNA------------T------TAA-T---------A------------TAT----C--------G---AGat---t-gc---ta-----a-------a
i Pteropus_alecto.KB030862.1                             I 4 I 4
s Puma_concolor.QAVW01001104.1                            20275627 32 -  38429054 ta-a---t-t--a---aaa--a------------t------ta-at---------a------------tat----t--------g---agat---t-gg---ca-----a-------a
i Puma_concolor.QAVW01001104.1                           I 2 I 4
s Pygathrix_cinerea.k141_1153803                             18403 27 -     91421 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----AATATAT----T------------------------------------------
i Pygathrix_cinerea.k141_1153803                         C 0 I 10
s Pygathrix_nigripes_b.ctg100                                 7612526 27 +   7812017 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----AATATAT----T------------------------------------------
i Pygathrix_nigripes_b.ctg100                               C 0 I 10
s Pygathrix_nigripes_a.k141_215492                             18433 27 -     72585 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----AATATAT----T------------------------------------------
i Pygathrix_nigripes_a.k141_215492                         C 0 I 10
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6841 36 +     55207 TA-G---T-TATA---ATAAAA------------T------TAA-C---------A------------CAT----T--------G---AGAT---T-GA---TG-----A-------A
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 18
s Rhinopithecus_bieti.k119_217274                            10101 27 -     11128 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----AATATAT----T------------------------------------------
i Rhinopithecus_bieti.k119_217274                        C 0 I 10
s Rhinopithecus_roxellana.NC_044550.1                     91239469 27 - 195417433 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----AATATAT----T------------------------------------------
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 10
s Rhinopithecus_strykeri.ctg102                            7675116 27 +   7961872 TA-A---T-T--G-----ATAA------------T------TT--T---------AGATT----AATATAT----T------------------------------------------
i Rhinopithecus_strykeri.ctg102                          C 0 I 10
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89170 33 -     96226 TTAA---T-T--A-----AAAA------------T------TAA-T---------A------------TAT----T--------G---AGGT---T-GC---TA-----A-------A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 4 I 4
s Sigmodon_hispidus.SigHis_scaffold_42075                     2171 10 -     30804 --------------------------------------------------------------------------------------------------C---TACCTATG-------G
i Sigmodon_hispidus.SigHis_scaffold_42075                I 5 I 3
s Sorex_araneus.JH798187.1                                13652333 11 -  18376816 -------------------------------------------------------------------------------------------------GC---AACCTctg-------g
i Sorex_araneus.JH798187.1                               I 22 I 4
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154489 11 -    313613 TA-A---T-T--A-----AAAT------------T-----------------------------------------------------------------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 21
s Semnopithecus_entellus.k141_1672505                         3275 27 -     12572 TA-A---T-T--G-----ATAA------------T------TT--T---------AAATT----AATATAT----T------------------------------------------
i Semnopithecus_entellus.k141_1672505                    C 0 I 10
s Semnopithecus_hypoleucos.k141_1615806                      30127 27 +     39453 TA-A---T-T--G-----ATAA------------T------TT--T---------AAATT----AATATAT----T------------------------------------------
i Semnopithecus_hypoleucos.k141_1615806                  C 0 I 10
s Semnopithecus_johnii.k141_670120                           10635 27 +     27826 TA-A---T-G--G-----ATAA------------T------TT--T---------AAATT----AATATAT----T------------------------------------------
i Semnopithecus_johnii.k141_670120                       C 0 I 10
s Semnopithecus_priam.k141_638794                            10176 27 -     19483 TA-A---T-T--G-----ATAA------------T------TT--T---------AAATT----AATATAT----T------------------------------------------
i Semnopithecus_priam.k141_638794                        C 0 I 10
s Semnopithecus_schistaceus.k141_1572284                      3474 27 -     12762 TA-A---T-T--G-----ATAA------------T------TT--T---------AAATT----AATATAT----T------------------------------------------
i Semnopithecus_schistaceus.k141_1572284                 C 0 I 10
s Semnopithecus_vetulus.k141_910252                           3319 27 +     13763 TA-A---T-T--G-----ATAA------------T------TT--T---------AAATT----AATATAT----T------------------------------------------
i Semnopithecus_vetulus.k141_910252                      C 0 I 10
s Spermophilus_dauricus.KZ294078.1                         1955450 32 -   3870691 ---a---t-t--tt--a---GA------------C------TAA-T---------A------------TAT----T--------G-ATAGAT---t-gc---ta-----a-------a
i Spermophilus_dauricus.KZ294078.1                       I 1 I 2
s Spilogale_gracilis.SpiGra_flattened_line_13525             32357 30 +     97271 ta-a---t-g--a---aa--caccaggtgacaatt------ca-aa---------a------------tg------------------------------------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 11 I 13
s Suricata_suricatta.SurSur_flattened_line_6629              19656 18 -    196729 ---------------------------------------------T---------A------------TAT----T--------G---AGAT---T-GG---TA-----A-------A
i Suricata_suricatta.SurSur_flattened_line_6629          I 16 I 4
s Sus_scrofa.CM000828.4                                    6812469 32 +  69701581 ta-a---t-t--g---aaa--a------------t------ta-at---------a------------tat----t--------a---agat---t-ga---tg-----a-------a
i Sus_scrofa.CM000828.4                                  C 0 I 4
s Tadarida_brasiliensis.TadBra_scaffold_25820                12160 32 +     41958 AT-A---A-T--A-----AAAA------------T------TAA-T---------A------------TAT----T--------G---AGAT---T-AC---TA-----A-------A
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 4 I 4
s Tarsius_lariang.k141_2201908                               27118 20 +     70052 ---------------------------------------------T---------A------------TAT----T--------G-GTAGAT---T-GT---TA-----A-------A
i Tarsius_lariang.k141_2201908                           I 12 I 4
s Tarsius_wallacei.k141_254427                                1915 20 -     16117 ---------------------------------------------T---------A------------TAT----T--------G-GTAGAT---T-GT---TA-----A-------A
i Tarsius_wallacei.k141_254427                           I 12 I 4
s Theropithecus_gelada.CM009954.1                        186431795 41 + 186847797 ta-a---t-t--g---a--TAA------------T------TT--T---------AGATT----AATATAT----T--------G-ATAGAT---T-AT---AA-----A-------A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106725 29 +    114563 TA-C---T-T--C-----AAAA------------T------TAA-T---------A------------GCT----TGTT-AAATA-A-------------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 16
s Tonatia_saurophila.TonSau_scaffold_294                     82545 31 +    610378 AT-A---T-T--A------AAA------------T------TAA-T---------A------------TAT----T--------G---AGAT---T-GC---TA-----A-------A
i Tonatia_saurophila.TonSau_scaffold_294                 I 4 I 4
s Trachypithecus_auratus.k141_722599                         14220 23 -     20410 TA-A---T-T--G-----ATAA------------T------TT--T---------A--------AATATAT----T------------------------------------------
i Trachypithecus_auratus.k141_722599                     C 0 I 10
s Trachypithecus_crepusculus.k141_582567                      3336 27 -     12674 TA-A---T-T--G-----ATAA------------T------TT--T---------AAATT----AATATAT----T------------------------------------------
i Trachypithecus_crepusculus.k141_582567                 C 0 I 10
s Trachypithecus_cristatus.k141_580354                       14328 23 +     19930 TA-A---T-T--G-----ATAA------------T------TT--T---------A--------AATATAT----T------------------------------------------
i Trachypithecus_cristatus.k141_580354                   C 0 I 10
s Trachypithecus_francoisi.k141_1412647                      10723 27 -     19997 TA-A---T-T--G-----ATAA------------T------TT--T---------AAATT----AATATAT----T------------------------------------------
i Trachypithecus_francoisi.k141_1412647                  C 0 I 10
s Trachypithecus_geei.k141_277701                            50865 27 -     60166 TA-A---T-T--G-----ATAA------------T------TT--T---------AAATT----AATATAT----T------------------------------------------
i Trachypithecus_geei.k141_277701                        C 0 I 10
s Trachypithecus_germaini.k141_912491                        18331 23 -     27529 TA-A---T-T--G-----ATAA------------T------TT--T---------A--------AATATAT----T------------------------------------------
i Trachypithecus_germaini.k141_912491                    C 0 I 10
s Trachypithecus_leucocephalus.k141_587342                   10693 27 -     10723 TA-A---T-T--G-----ATAA------------T------TT--T---------AAATT----AATATAT----T------------------------------------------
i Trachypithecus_leucocephalus.k141_587342               C 0 N 0
s Trachypithecus_obscurus.k141_190785                        28193 27 +     32220 TA-A---T-T--G-----ATAA------------T------TT--T---------AAATT----AATATAT----T------------------------------------------
i Trachypithecus_obscurus.k141_190785                    C 0 I 10
s Trachypithecus_phayrei.ctg124                            5942290 27 +   6242583 TA-A---T-T--G-----ATAA------------T------TT--T---------AAATT----AATATAT----T------------------------------------------
i Trachypithecus_phayrei.ctg124                          C 0 I 10
s Trachypithecus_pileatus.k141_2007326                       11543 27 +     20839 TA-A---T-T--G-----ATAA------------T------TT--T---------AAATT----AATATAT----T------------------------------------------
i Trachypithecus_pileatus.k141_2007326                   C 0 I 10
s Tragulus_javanicus.TraJav_scaffold_40725                    1158 34 +     27266 GA-G---T-AATG-----AAAA------------T------TAA-C---------A------------CGT----T--------G---AGAT---T-GA---TG-----A-------A
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 I 4
s Tupaia_chinensis.KB320699.1                              2157468 34 +   4065304 ta-a---t-t--tt--a---ga------------t------tt-cT---------A------------TAT----T--------G-ATATAT---G-AC---TT-----A-------A
i Tupaia_chinensis.KB320699.1                            C 0 I 10
s Tursiops_truncatus.MRVK01000835.1                       15739249 32 +  33153633 ta-a---t-t--a---aa--ta------------t------ta-at---------a------------tat----t--------g---agAT---T-GA---TG-----A-------G
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 4
s Uropsilus_gracilis.UroGra_scaffold_12083                   54596 33 -     77625 TC-A---T-T--A-----AAAA------------C------TAATT---------A------------CAT----A--------G---AAAT---A-GC---AA-----A-------A
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 4
s Ursus_maritimus.KK499267.1                               4851742 30 -   5085361 ta-a---t-g--a---aa--caccaggtaacaatt------ta-aa---------a------------tg------------------------------------------------
i Ursus_maritimus.KK499267.1                             I 11 I 14
s Vicugna_pacos.KN270157.1                                 5373303 20 -   5488506 ta-c---a-t--at--aa---a------------a------ga-at---------a------------cat----a------------------------------------------
i Vicugna_pacos.KN270157.1                               C 0 I 9
s Vulpes_lagopus.VulLag_flattened_line_30954                 13434 29 -     43706 ta-a---c-g--a---aa--tgccag-tgataatt------ta-aa---------a------------tg------------------------------------------------
i Vulpes_lagopus.VulLag_flattened_line_30954             I 11 T 1284
s Xerus_inauris.XerIna_scaffold_2302                          2450 34 +    224448 TA-A---T-T--T-----TAGA------------T------TAA-T---------A------------TAT----T--------G-ATTGAT---T-GC---TA-----A-------A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 2
s Zapus_hudsonius.ZapHud_scaffold_11398                      16165  9 +     63895 ---------------------A------------T------TTA-T---------A------------TA------------------------------------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 6 I 24
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Trachypithecus_laotum.k141_907409                          11930  0 -     21137 C
e Trachypithecus_hatinhensis.k141_17719                         27  0 +      9229 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   7643  0 +      8208 C
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73921  0 +    116680 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Rhinolophus_sinicus.LVEH01000134.1                        368295  0 -   3329780 C
e Rattus_norvegicus.chr16                                 53571770 803 +  90668790 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odocoileus_virginianus.KZ100018.1                         145852 291 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190536  0 +    196477 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           8152 215 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Megaderma_lyra.MegLyr_scaffold_4542                        14651  0 -    207569 C
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            20579 2631 -    143317 I
e Hipposideros_galeritus.HipGal_scaffold_101188                404  0 +      9903 C
e Hipposideros_armiger.JXIK01000431.1                       111834  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 32207 2668 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64769  0 +   2246927 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Crocidura_indochinensis.CroInd_scaffold_37019               4143  0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           1799  0 +     23735 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1750  0 -      8501 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                        99323 2643 +    143979 I
e Cavia_porcellus.DS562891.1                              18360449 2635 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18348189 2632 -  23392119 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C

a score=0.000000
s hg38.chrUn_KI270753v1                                      10087 6 +     62944 TAT------G-TT
s Acinonyx_jubatus.LLWD01001279.1                           828656 3 -   1699592 t--------a-t-
i Acinonyx_jubatus.LLWD01001279.1                        I 4 I 4
s Acomys_cahirinus.AcoCah_scaffold_12655                     72633 1 +     87051 -----------T-
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 4 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511983 3 -  29979442 t--------a-t-
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 14 I 3
s Ailurus_fulgens.LNAC01001112.1                             81063 3 -    347723 t--------a-t-
i Ailurus_fulgens.LNAC01001112.1                         I 14 I 3
s Allactaga_bullata.AllBul_scaffold_9566                     75729 3 -     89534 A--------A-C-
i Allactaga_bullata.AllBul_scaffold_9566                 I 24 C 0
s Allenopithecus_nigroviridis.k141_3361533                   17954 4 -     52922 T--------G-TT
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         17889 4 -     28001 T--------G-TT
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8384 4 -     18505 T--------G-TT
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9237 4 -     12518 T--------G-TT
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              9701 4 +     51355 T--------G-CT
i Alouatta_belzebul.k141_3560514                         I 2 C 0
s Alouatta_caraya.k141_1701091                                2806 4 -     36483 T--------G-CT
i Alouatta_caraya.k141_1701091                           I 2 C 0
s Alouatta_discolor.k141_566626                              13263 4 +     28687 T--------G-CT
i Alouatta_discolor.k141_566626                          I 2 C 0
s Alouatta_juara.k141_1302312                                 1731 4 +     27940 T--------G-CT
i Alouatta_juara.k141_1302312                            I 2 C 0
s Alouatta_macconnelli.k141_918386                            2810 4 -      9457 T--------G-CT
i Alouatta_macconnelli.k141_918386                       I 2 C 0
s Alouatta_nigerrima.k141_1929159                             1768 4 +     30492 T--------G-CT
i Alouatta_nigerrima.k141_1929159                        I 2 C 0
s Alouatta_palliata.k141_2135620                              5761 4 +     47717 T--------G-CT
i Alouatta_palliata.k141_2135620                         I 15 C 0
s Alouatta_puruensis.k141_362188                              2498 4 +      5663 T--------G-CT
i Alouatta_puruensis.k141_362188                         I 2 C 0
s Alouatta_seniculus.k141_117119                             16950 4 +     50774 T--------G-CT
i Alouatta_seniculus.k141_117119                         I 2 C 0
s Ammotragus_lervia.NIVO01071767.1                          677105 3 -   2318259 t--------t-t-
i Ammotragus_lervia.NIVO01071767.1                       I 4 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      186736 3 +    412891 T--------A-T-
i Anoura_caudifer.AnoCau_scaffold_1412                   I 4 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             99582 3 -    100397 T--------T-T-
i Antilocapra_americana.AntAmePen_scaffold_12469         I 17 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      13994 3 +     20879 T--------A-G-
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 6 I 16
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6142 3 +     43469 T--------A-T-
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 4 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21209962 4 -  21539123 T--------G-CT
i Ateles_geoffroyi_b.tarseq_1536                            I 4 C 0
s Ateles_belzebuth.k141_445860                               44758 4 -     48001 T--------G-CT
i Ateles_belzebuth.k141_445860                           I 4 C 0
s Ateles_chamek.k141_1806455                                 27562 4 -     30947 T--------G-CT
i Ateles_chamek.k141_1806455                             I 4 C 0
s Ateles_geoffroyi_a.k141_833924                                9334 4 -     89868 T--------G-CT
i Ateles_geoffroyi_a.k141_833924                           I 4 C 0
s Ateles_marginatus.k141_803263                              13718 4 -     40414 T--------G-CT
i Ateles_marginatus.k141_803263                          I 4 C 0
s Ateles_paniscus.k141_457735                                21607 4 +     72325 T--------G-CT
i Ateles_paniscus.k141_457735                            I 4 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193142 3 +  23207421 t--------t-t-
i Balaenoptera_acutorostrata.KI537508.1                  I 4 C 0
s Balaenoptera_bonaerensis.DF707048.1                         3607 3 -     18090 t--------t-t-
i Balaenoptera_bonaerensis.DF707048.1                    I 4 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    28192 3 +     34529 T--------T-T-
i Beatragus_hunteri.BeaHun_scaffold_50177                I 4 C 0
s Bison_bison.KN261452.1                                    201752 3 -    288883 T--------T-A-
i Bison_bison.KN261452.1                                 I 4 I 3
s Bos_indicus.CM003047.1                                  20274935 3 +  48749331 T--------T-A-
i Bos_indicus.CM003047.1                                 I 4 I 3
s Bos_mutus.JH880303.1                                     1127487 3 -   1948126 t--------t-a-
i Bos_mutus.JH880303.1                                   I 4 I 3
s Bos_taurus.CM000203.6                                   18085573 3 +  45695690 T--------T-A-
i Bos_taurus.CM000203.6                                  I 4 I 3
s Bubalus_bubalis.KI419123.1                               2821527 3 +   4408762 t--------t-t-
i Bubalus_bubalis.KI419123.1                             I 4 I 3
s Cacajao_ayresi.k141_552049                                102584 4 -    122966 C--------G-CT
i Cacajao_ayresi.k141_552049                             I 4 C 0
s Cacajao_calvus.k141_5142                                   62089 4 +     81800 C--------G-CT
i Cacajao_calvus.k141_5142                               I 4 C 0
s Cacajao_hosomi.k141_81245                                  31269 4 -     95584 C--------G-CT
i Cacajao_hosomi.k141_81245                              I 4 C 0
s Cacajao_melanocephalus.k141_619699                         55370 4 -    119600 C--------G-CT
i Cacajao_melanocephalus.k141_619699                     I 4 C 0
s Camelus_bactrianus.KN276810.1                           10003811 3 -  17673402 t--------a-t-
i Camelus_bactrianus.KN276810.1                          I 9 C 0
s Camelus_dromedarius.KN272107.1                           2336283 3 -   7040546 t--------a-t-
i Camelus_dromedarius.KN272107.1                         I 9 C 0
s Camelus_ferus.KB017975.1                                  404581 3 -   1652518 t--------a-t-
i Camelus_ferus.KB017975.1                               I 9 C 0
s CanFam4.chr16                                           17801859 3 -  60362399 t--------a-t-
i CanFam4.chr16                                          I 14 I 8
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     2600 3 -     43241 t--------a-t-
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 14 I 8
s Canis_lupus_dingo.QKWQ01000480.1                         9037302 3 -   9314153 t--------a-t-
i Canis_lupus_dingo.QKWQ01000480.1                       I 14 I 8
s Canis_lupus_familiaris.chr16                            17961771 3 -  59632846 t--------a-t-
i Canis_lupus_familiaris.chr16                           I 14 I 8
s Canis_lupus_orion.HG994398.1                            18503073 3 +  63665305 t--------a-t-
i Canis_lupus_orion.HG994398.1                           I 14 I 8
s Capra_aegagrus.CM003241.1                               18831216 3 +  46296322 t--------t-t-
i Capra_aegagrus.CM003241.1                              I 4 C 0
s Capra_hircus.CM004588.1                                 18061936 3 -  44709034 t--------t-t-
i Capra_hircus.CM004588.1                                I 4 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    2320 3 -     12242 C--------A-T-
i Capromys_pilorides.CapPil_scaffold_65020               I 2 C 0
s Carlito_syrichta.NW_007259797.1                           156649 4 -    496798 T--------T-CT
i Carlito_syrichta.NW_007259797.1                        I 4 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6484 3 -     11696 T--------G-T-
i Carollia_perspicillata.CarPer_scaffold_92756           I 4 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138637 3 +    179628 T--------A-T-
i Castor_canadensis.CasCan_scaffold_2074                 I 5 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     94941 3 +    217609 T--------A-T-
i Catagonus_wagneri.CatWag_scaffold_2839                 I 4 I 2
s Cavia_aperea.AVPZ01000300.1                             18350821 2 -  23392119 t--------a---
i Cavia_aperea.AVPZ01000300.1                            I 2632 C 0
s Cavia_porcellus.DS562891.1                              18363084 2 -  23407841 T--------A---
i Cavia_porcellus.DS562891.1                             I 2635 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                       101966 2 +    143979 T--------A---
i Cavia_tschudii.CavTsc_scaffold_8919                    I 2643 C 0
s Cephalopachus_bancanus.k141_1423433                         6147 4 +     31688 T--------T-CT
i Cephalopachus_bancanus.k141_1423433                    I 4 C 0
s Cercocebus_atys.KQ010504.1                               4478915 4 +   4669795 T--------G-TT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3409 4 +     17872 T--------G-TT
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4004 4 -     14043 T--------G-TT
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12099 4 +     27781 C--------G-TT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12249 4 -     20310 T--------G-TT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15229 4 +     29689 T--------G-TT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            9985 4 -     20078 T--------G-TT
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          17900 4 -     27936 T--------G-TT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            6767 4 -     17152 T--------G-TT
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826499 4 +  39242232 T--------G-TT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226003 4 -  21565898 T--------G-TT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43122 4 -     53127 T--------G-TT
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3372 4 +     13442 T--------G-TT
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       17918 4 -     27947 T--------G-TT
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                          947 4 +     10558 T--------G-TT
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          3952 4 +     14005 T--------G-TT
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1190 4 -     17098 T--------G-CT
i Cheracebus_lucifer.k141_49986                          I 3 C 0
s Cheracebus_lugens.k141_1393925                              1066 4 +     17877 T--------G-CT
i Cheracebus_lugens.k141_1393925                         I 3 C 0
s Cheracebus_regulus.k141_471822                            158633 4 -    216457 T--------G-CT
i Cheracebus_regulus.k141_471822                         I 3 C 0
s Cheracebus_torquatus.k141_1170026                          63108 4 +     76511 T--------G-CT
i Cheracebus_torquatus.k141_1170026                      I 3 C 0
s Chinchilla_lanigera.JH722012.1                           1254250 3 +   2543920 t--------a-t-
i Chinchilla_lanigera.JH722012.1                         I 2 C 0
s Chiropotes_israelita.k141_747660                           99713 4 +    146308 C--------G-CT
i Chiropotes_israelita.k141_747660                       I 4 C 0
s Chiropotes_sagulatus.k141_1421488                          31521 4 -     50570 C--------G-CT
i Chiropotes_sagulatus.k141_1421488                      I 4 C 0
s Chlorocebus_aethiops.ctg25                              18431822 4 -  18827391 T--------G-TT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18319 4 -     50209 T--------G-TT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425323 4 + 135778131 T--------G-TT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1913828 1 +   2368649 T------------
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952072 1 + 200372422 T------------
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40353 1 +     84244 T------------
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549378 3 -  53390261 T--------G-T-
i Condylura_cristata.JH655891.1                          I 21 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 51889 1 +     63868 -----------T-
i Cricetomys_gambianus.CriGam_scaffold_18520             I 4 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29841 3 -     87169 T--------A-T-
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 2 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37280 3 +     51376 C--------A-T-
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 10 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900             1233 3 -     75252 T--------A-T-
i Dasyprocta_punctata.DasPun_flattened_line_15900        N 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16812782 2 +  35494412 t--------t---
i Delphinapterus_leucas.KZ290073.1                       I 6 C 0
s Desmodus_rotundus.KZ672289.1                             8631482 3 +  20541912 G--------A-T-
i Desmodus_rotundus.KZ672289.1                           I 3 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37738 3 +     67921 C--------A-T-
i Dinomys_branickii.DinBra_scaffold_21862                I 2 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 34875 2 -     42551 T--------A---
i Dolichotis_patagonum.DolPat_scaffold_30833             I 2668 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       312264 3 +    607251 t--------t-t-
i Elaphurus_davidianus.JRFZ01104969.1                    I 4 C 0
s Ellobius_lutescens.LOEQ01008920.1                          22398 1 -    110024 -----------t-
i Ellobius_lutescens.LOEQ01008920.1                      I 4 C 0
s Ellobius_talpinus.LOJH01081419.1                            2318 1 +      8657 -----------t-
i Ellobius_talpinus.LOJH01081419.1                       I 4 C 0
s Enhydra_lutris.KZ291758.1                               16331030 3 -  41312741 t--------a-t-
i Enhydra_lutris.KZ291758.1                              I 32 I 3
s Eptesicus_fuscus.JH977646.1                              2147972 3 -  14770903 N--------N-N-
i Eptesicus_fuscus.JH977646.1                            I 4 C 0
s Erythrocebus_patas.Contig38                             21208495 4 -  21539334 T--------G-TT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12454 3 +    133382 T--------T-T-
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 4 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             26407 3 -     44125 T--------T-T-
i Eubalaena_japonica.EubJap_flattened_line_31514         I 4 C 0
s Felis_catus.CM001381.2                                  20238299 3 + 206538554 t--------a-t-
i Felis_catus.CM001381.2                                 I 4 I 4
s Felis_catus_fca126.CM031415.1                           20197142 3 + 205367284 t--------a-t-
i Felis_catus_fca126.CM031415.1                          I 4 I 4
s Felis_nigripes.FelNig_flattened_line_20823                 10896 3 -     36744 T--------A-T-
i Felis_nigripes.FelNig_flattened_line_20823             I 4 I 4
s Fukomys_damarensis.KN121974.1                             851760 3 +   3816255 C--------A-T-
i Fukomys_damarensis.KN121974.1                          I 2 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               2872 4 -      9135 T--------A-Ta
i Galeopterus_variegatus.GalVar_scaffold_108840          I 4 I 215
s Giraffa_tippelskirchi.LVKQ01S007888.1                     610223 3 -    660261 t--------t-t-
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 4 C 0
s Glis_glis.GliGli_scaffold_19807                            32287 3 +     49224 T--------A-T-
i Glis_glis.GliGli_scaffold_19807                        I 2 C 0
s Gorilla_beringei.k141_3596273                              19332 6 -     32273 TAT------G-TT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341468 6 + 186649187 tat------g-tt
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33965 3 +     78134 T--------A-T-
i Graphiurus_murinus.GraMur_scaffold_10447               I 2 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243679 3 +    327341 T--------A-G-
i Helogale_parvula.HelPar_flattened_line_2585            I 4 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 19425 3 +     36099 T--------T-T-
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 4 C 0
s Heterocephalus_glaber.JH602082.1                        20663548 3 +  22651954 C--------A-T-
i Heterocephalus_glaber.JH602082.1                       I 2 C 0
s Hoolock_leuconedys.ctg274                                    438128 4 +    630532 T--------G-TT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46384 3 +     55795 T--------A-T-
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 4 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23210 2 -    143317 T--------A---
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 2631 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84439 3 +    135385 C--------A-T-
i Hystrix_cristata.HysCri_scaffold_5660                  I 2 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7522338 9 -   7955117 t--gtattta-t-
i Ictidomys_tridecemlineatus.JH393364.1                  I 2 I 10
s Inia_geoffrensis.IniGeo_flattened_line_34779                   7 2 -     31341 T--------T---
i Inia_geoffrensis.IniGeo_flattened_line_34779           N 0 C 0
s Jaculus_jaculus.JH725527.1                               8278465 3 -   9596543 a--------a-c-
i Jaculus_jaculus.JH725527.1                             I 24 C 0
s Kogia_breviceps.KogBre_flattened_line_192630                3358 1 -      3359 T------------
i Kogia_breviceps.KogBre_flattened_line_192630           I 16 N 0
s Lagothrix_lagothricha.k141_1005387                         15766 4 -     38430 T--------G-CT
i Lagothrix_lagothricha.k141_1005387                     I 3 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    17740 2 -     42476 T--------A---
i Lasiurus_borealis.LasBor_scaffold_32767                I 4 I 15
s Leptonychotes_weddellii.KB714746.1                       3044465 3 +   3914936 t--------a-t-
i Leptonychotes_weddellii.KB714746.1                     I 14 I 3
s Lepus_americanus.LepAme_scaffold_107385                     8140 4 -     14121 C--------A-TG
i Lepus_americanus.LepAme_scaffold_107385                I 6 C 0
s Lipotes_vexillifer.KE559953.1                             269045 2 -    662738 t--------t---
i Lipotes_vexillifer.KE559953.1                          I 4 C 0
s Lophocebus_aterrimus.ctg367                              1440457 4 +   1826925 T--------G-TT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17958011 3 -  59628241 t--------a-t-
i Lycaon_pictus.CM007581.1                               I 14 I 8
s Macaca_arctoides.k141_2326796                              10267 4 +     40492 T--------G-TT
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679521 4 +  60120075 T--------G-TT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16038 4 -     26193 T--------G-TT
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            83814 4 -    114318 t--------g-tt
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9505 4 -     23192 T--------G-TT
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                18969 4 -     29190 T--------G-TT
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27547 4 +     37952 T--------G-TT
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842624 4 + 187317192 T--------G-TT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461202 4 -  25927173 T--------G-TT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83403 4 +     89720 T--------G-TT
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10396 4 +     20474 T--------G-TT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10193 4 -     14993 T--------G-TT
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333055 4 -    668171 T--------G-TT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8505 4 -     24072 T--------G-TT
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29136 4 -     45290 T--------G-TT
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92024 3 +     94391 T--------A-T-
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 4 C 0
s Mandrillus_leucophaeus.scaffold280                      23940724 4 -  24302211 T--------G-TT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354840 4 +    752769 t--------g-tt
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              19594 3 +    737560 t--------a-t-
i Manis_javanica.JSZB01003497.1                          I 3 C 0
s Manis_pentadactyla.KN006162.1                              51612 3 -    317179 t--------a-t-
i Manis_pentadactyla.KN006162.1                          I 3 C 0
s Marmota_marmota.CZRN01000018.1                          33104620 9 -  40650429 t--gtgttta-t-
i Marmota_marmota.CZRN01000018.1                         I 2 I 10
s Mellivora_capensis.MelCap_flattened_line_69365             11749 3 +     13704 T--------A-T-
i Mellivora_capensis.MelCap_flattened_line_69365         I 39 I 3
s Meriones_unguiculatus.MerUng_scaffold_7390                 34641 1 +    140813 -----------T-
i Meriones_unguiculatus.MerUng_scaffold_7390             I 4 C 0
s Mesocricetus_auratus.KB708134.1                         12184098 1 -  29670104 -----------t-
i Mesocricetus_auratus.KB708134.1                        I 4 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    4663 2 +     10310 T--------T---
i Mesoplodon_bidens.MesBid_scaffold_108144               I 4 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                17233 3 -     19307 T--------A-T-
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 4 C 0
s Microtus_ochrogaster.CM001695.1                         11262381 1 -  27267610 -----------t-
i Microtus_ochrogaster.CM001695.1                        I 4 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1851641 3 +   8254450 t--------a-t-
i Miniopterus_natalensis.LDJU01000034.1                  I 4 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             35321 3 +     64694 T--------A-T-
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 4 C 0
s Miopithecus_ogouensis.k141_534055                          12400 4 -     28506 T--------G-TT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         7333 3 -      8324 t--------a-t-
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 14 I 3
s Monodon_monoceros.MonMon_M_scaffold_103                    28165 2 -    437263 T--------T---
i Monodon_monoceros.MonMon_M_scaffold_103                I 6 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 143031 3 -    366855 T--------A-T-
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 4 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   2287 3 +     82753 T--------T-T-
i Moschus_moschiferus.MosMos_scaffold_13123              I 4 C 0
s Mus_caroli.LT608237.1                                   84363028 1 - 120012414 -----------c-
i Mus_caroli.LT608237.1                                  I 4 C 0
s Mus_musculus.chr8                                       87652529 1 - 129401213 -----------C-
i Mus_musculus.chr8                                      I 4 C 0
s Mus_pahari.LT608297.1                                   31357263 1 -  89631738 -----------c-
i Mus_pahari.LT608297.1                                  I 4 C 0
s Mus_spretus.CM004101.1                                  90755018 1 - 130317789 -----------c-
i Mus_spretus.CM004101.1                                 I 4 C 0
s Mustela_putorius.JH418006.1                               303131 3 -  14710649 T--------A-T-
i Mustela_putorius.JH418006.1                            I 32 I 3
s Myocastor_coypus.MyoCoy_scaffold_10123                     72502 3 -     80779 C--------A-T-
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 10 C 0
s Myotis_brandtii.KE162005.1                                280085 3 -  10118263 t--------a-t-
i Myotis_brandtii.KE162005.1                             I 4 C 0
s Myotis_davidii.KB100139.1                                1589082 3 -   6019432 t--------a-t-
i Myotis_davidii.KB100139.1                              I 4 C 0
s Myotis_lucifugus.GL429869.1                              3905181 3 -   4330536 t--------a-t-
i Myotis_lucifugus.GL429869.1                            I 4 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                        1334 3 +      1835 T--------A-T-
i Myotis_myotis.MyoMyo_scaffold_281845                   I 4 C 0
s Nannospalax_galili.KL204047.1                            2036817 1 -   3037898 -----------t-
i Nannospalax_galili.KL204047.1                          I 2 C 0
s Nasalis_larvatus.k141_413338                               18454 1 +     21681 T------------
i Nasalis_larvatus.k141_413338                           I 10 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308926 2 +  31847680 t--------a---
i Neomonachus_schauinslandi.NINY01007730.1               I 14 I 4
s Neophocaena_asiaeorientalis.KZ687982.1                   5867129 2 +   7148211 T--------A---
i Neophocaena_asiaeorientalis.KZ687982.1                 I 4 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    759227 3 +    783361 T--------A-T-
i Noctilio_leporinus.NocLep_scaffold_251                 I 2 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150789 3 -   9404916 t--------a-t-
i Nyctereutes_procyonoides.CAJHUB010000658.1             T 1140 C 0
s Ochotona_princeps.JH802162.1                             1365568 4 +   3988456 T--------A-GG
i Ochotona_princeps.JH802162.1                           I 6 C 0
s Odobenus_rosmarus.KB229312.1                              508068 3 -   2017862 t--------a-t-
i Odobenus_rosmarus.KB229312.1                           I 14 I 3
s Okapia_johnstoni.LVCL01S0005463.1                          78139 3 -    150152 t--------t-t-
i Okapia_johnstoni.LVCL01S0005463.1                      I 4 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   27039 1 +     28053 -----------T-
i Ondatra_zibethicus.OndZib_scaffold_46174               I 4 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    82042 1 +    102263 -----------T-
i Onychomys_torridus.OnyTor_scaffold_2986                I 4 C 0
s Orcinus_orca.KB316932.1                                  2783043 2 -  10937097 T--------T---
i Orcinus_orca.KB316932.1                                I 10 C 0
s Oryctolagus_cuniculus.CM000791.1                        67149041 4 + 174332312 C--------A-TG
i Oryctolagus_cuniculus.CM000791.1                       I 6 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       463734 3 -    559221 t--------a-t-
i Otocyon_megalotis.JAEUCK010005147.1                    T 1619 C 0
s Ovis_aries.CM001607.2                                   17587398 3 +  44047080 t--------t-t-
i Ovis_aries.CM001607.2                                  I 4 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      175390 3 -    191736 T--------T-T-
i Ovis_canadensis.OviCan_scaffold_2572                   I 4 C 0
s Pan_paniscus.KQ411613.1                                    47433 6 +     80009 tat------g-tt
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146303 6 + 189151597 tat------g-tt
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152504 3 +    230217 T--------A-T-
i Panthera_onca.PanOnc_flattened_line_3271               I 4 C 0
s Panthera_pardus.KV860321.1                                265713 3 +  18783137 t--------a-t-
i Panthera_pardus.KV860321.1                             I 4 C 0
s Panthera_tigris.KE722367.1                               4722593 3 -   8748460 t--------a-t-
i Panthera_tigris.KE722367.1                             I 4 C 0
s Pantholops_hodgsonii.KE114653.1                          1266295 3 -   2937107 t--------t-t-
i Pantholops_hodgsonii.KE114653.1                        I 4 C 0
s Papio_anubis.CM001495.2                                183446530 4 + 183742232 T--------G-TT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10180 4 +     20448 T--------G-TT
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20566988 4 +  20919399 t--------g-tt
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   8920 4 +     41871 T--------G-TT
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12213 4 +     27711 T--------G-TT
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3212 4 -     11374 T--------G-TT
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14004 3 -     78924 T--------T-T-
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 4 C 0
s Peromyscus_maniculatus.KI615324.1                       18196669 1 -  18517816 -----------t-
i Peromyscus_maniculatus.KI615324.1                      I 4 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     29477 1 -     29689 -----------T-
i Petromus_typicus.PetTyp_scaffold_42190                 I 4 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              10086 2 +     63832 T--------A---
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 4 C 0
s Piliocolobus_badius.k141_1142974                            1531 1 +     68526 T------------
i Piliocolobus_badius.k141_1142974                       I 4 C 0
s Piliocolobus_gordonorum.k141_381342                        41677 1 +     89929 T------------
i Piliocolobus_gordonorum.k141_381342                    I 4 C 0
s Piliocolobus_kirkii.k141_448987                            43091 1 +     51399 T------------
i Piliocolobus_kirkii.k141_448987                        I 4 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299328 1 -  14605196 T------------
i Piliocolobus_tephrosceles.PDMG02000141.1               I 4 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3114 4 +     22620 T--------ATT-
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 4 C 0
s Pithecia_albicans.k141_1476471                              4975 4 +     26961 C--------G-CT
i Pithecia_albicans.k141_1476471                         I 4 C 0
s Pithecia_chrysocephala.k141_839575                          1120 4 +     23417 C--------G-CT
i Pithecia_chrysocephala.k141_839575                     I 4 C 0
s Pithecia_hirsuta.k141_305604                                4967 4 +     29694 C--------G-CT
i Pithecia_hirsuta.k141_305604                           I 4 C 0
s Pithecia_mittermeieri.k141_446740                          29993 4 +     52772 C--------G-CT
i Pithecia_mittermeieri.k141_446740                      I 4 C 0
s Pithecia_pissinattii.k141_1824269                           4989 4 +     26198 C--------G-CT
i Pithecia_pissinattii.k141_1824269                      I 4 C 0
s Pithecia_pithecia.tarseq_165                             3941537 4 +   4542175 C--------G-CT
i Pithecia_pithecia.tarseq_165                           I 4 C 0
s Pithecia_vanzolinii.k141_1697688                            4953 4 -     23490 C--------G-CT
i Pithecia_vanzolinii.k141_1697688                       I 4 C 0
s Plecturocebus_bernhardi.k141_2549090                        9209 4 -     39866 T--------G-CT
i Plecturocebus_bernhardi.k141_2549090                   I 4 C 0
s Plecturocebus_brunneus.k141_1495506                        18375 4 +     34906 T--------G-CT
i Plecturocebus_brunneus.k141_1495506                    I 4 C 0
s Plecturocebus_caligatus.k141_1382851                       22637 4 +     87950 T--------G-CT
i Plecturocebus_caligatus.k141_1382851                   I 4 C 0
s Plecturocebus_cinerascens.k141_1164729                     23466 4 +     88961 T--------G-CT
i Plecturocebus_cinerascens.k141_1164729                 I 4 C 0
s Plecturocebus_cupreus.k141_2351393                          9137 4 +     39403 T--------G-CT
i Plecturocebus_cupreus.k141_2351393                     I 4 C 0
s Plecturocebus_dubius.k141_1058799                          22918 4 -     87928 T--------G-CT
i Plecturocebus_dubius.k141_1058799                      I 4 C 0
s Plecturocebus_grovesi.k141_2013005                         29877 4 +     60166 T--------G-CT
i Plecturocebus_grovesi.k141_2013005                     I 4 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30074 4 +     67232 T--------G-CT
i Plecturocebus_hoffmannsi.k141_3303950                  I 4 C 0
s Plecturocebus_miltoni.k141_349282                          25547 4 +     90634 T--------G-CT
i Plecturocebus_miltoni.k141_349282                      I 4 C 0
s Plecturocebus_moloch.k141_1031110                          22919 4 -     89403 T--------G-CT
i Plecturocebus_moloch.k141_1031110                      I 4 C 0
s Pongo_abelii.CM009266.2                                189134444 6 + 189387572 tat------g-tt
i Pongo_abelii.CM009266.2                                I 41 C 0
s Pongo_pygmaeus.ctg66                                     9574053 6 +   9816681 TAT------G-TT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Psammomys_obesus.NESX01036370.1                            12282 1 -     21651 -----------t-
i Psammomys_obesus.NESX01036370.1                        I 4 C 0
s Presbytis_comata.k141_677006                               76635 1 -     81375 T------------
i Presbytis_comata.k141_677006                           I 10 C 0
s Presbytis_mitrata.k141_1087752                              8452 1 +     19060 T------------
i Presbytis_mitrata.k141_1087752                         I 10 C 0
s Pteronotus_parnellii.KE909381.1                            16516 3 -     21811 t--------a-t-
i Pteronotus_parnellii.KE909381.1                        I 4 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41944 3 +     42204 T--------A-T-
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 32 I 3
s Pteropus_alecto.KB030862.1                              22978117 3 +  28871421 t--------a-t-
i Pteropus_alecto.KB030862.1                             I 4 C 0
s Puma_concolor.QAVW01001104.1                            20275663 3 -  38429054 t--------a-t-
i Puma_concolor.QAVW01001104.1                           I 4 I 4
s Pygathrix_cinerea.k141_1153803                             18440 1 -     91421 T------------
i Pygathrix_cinerea.k141_1153803                         I 10 C 0
s Pygathrix_nigripes_b.ctg100                                 7612563 1 +   7812017 T------------
i Pygathrix_nigripes_b.ctg100                               I 10 C 0
s Pygathrix_nigripes_a.k141_215492                             18470 1 -     72585 T------------
i Pygathrix_nigripes_a.k141_215492                         I 10 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6895 3 +     55207 T--------T-T-
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 18 C 0
s Rhinopithecus_bieti.k119_217274                            10138 1 -     11128 T------------
i Rhinopithecus_bieti.k119_217274                        I 10 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239506 1 - 195417433 T------------
i Rhinopithecus_roxellana.NC_044550.1                    I 10 C 0
s Rhinopithecus_strykeri.ctg102                            7675153 1 +   7961872 T------------
i Rhinopithecus_strykeri.ctg102                          I 10 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89207 3 -     96226 T--------A-T-
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 4 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154521 3 -    313613 T--------A-T-
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 21 C 0
s Semnopithecus_entellus.k141_1672505                         3312 1 -     12572 T------------
i Semnopithecus_entellus.k141_1672505                    I 10 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30164 1 +     39453 T------------
i Semnopithecus_hypoleucos.k141_1615806                  I 10 C 0
s Semnopithecus_johnii.k141_670120                           10672 1 +     27826 T------------
i Semnopithecus_johnii.k141_670120                       I 10 C 0
s Semnopithecus_priam.k141_638794                            10213 1 -     19483 T------------
i Semnopithecus_priam.k141_638794                        I 10 C 0
s Semnopithecus_schistaceus.k141_1572284                      3511 1 -     12762 T------------
i Semnopithecus_schistaceus.k141_1572284                 I 10 C 0
s Semnopithecus_vetulus.k141_910252                           3356 1 +     13763 T------------
i Semnopithecus_vetulus.k141_910252                      I 10 C 0
s Sorex_araneus.JH798187.1                                13652348 3 -  18376816 t--------a-t-
i Sorex_araneus.JH798187.1                               I 4 C 0
s Spermophilus_dauricus.KZ294078.1                         1955484 9 -   3870691 t--gtattta-t-
i Spermophilus_dauricus.KZ294078.1                       I 2 I 10
s Spilogale_gracilis.SpiGra_flattened_line_13525             32400 3 +     97271 t--------a-t-
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 13 I 3
s Suricata_suricatta.SurSur_flattened_line_6629              19678 3 -    196729 T--------A-T-
i Suricata_suricatta.SurSur_flattened_line_6629          I 4 C 0
s Sus_scrofa.CM000828.4                                    6812505 3 +  69701581 t--------a-t-
i Sus_scrofa.CM000828.4                                  I 4 I 2
s Tadarida_brasiliensis.TadBra_scaffold_25820                12196 3 +     41958 T--------A-T-
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 4 C 0
s Tarsius_lariang.k141_2201908                               27142 4 +     70052 T--------A-CT
i Tarsius_lariang.k141_2201908                           I 4 C 0
s Tarsius_wallacei.k141_254427                                1939 4 -     16117 T--------A-CT
i Tarsius_wallacei.k141_254427                           I 4 C 0
s Theropithecus_gelada.CM009954.1                        186431836 4 + 186847797 T--------G-TT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106770 3 +    114563 C--------A-T-
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 16 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     82580 3 +    610378 T--------A-T-
i Tonatia_saurophila.TonSau_scaffold_294                 I 4 C 0
s Trachypithecus_auratus.k141_722599                         14253 1 -     20410 T------------
i Trachypithecus_auratus.k141_722599                     I 10 C 0
s Trachypithecus_crepusculus.k141_582567                      3373 1 -     12674 T------------
i Trachypithecus_crepusculus.k141_582567                 I 10 C 0
s Trachypithecus_cristatus.k141_580354                       14361 1 +     19930 T------------
i Trachypithecus_cristatus.k141_580354                   I 10 C 0
s Trachypithecus_francoisi.k141_1412647                      10760 1 -     19997 T------------
i Trachypithecus_francoisi.k141_1412647                  I 10 C 0
s Trachypithecus_geei.k141_277701                            50902 1 -     60166 T------------
i Trachypithecus_geei.k141_277701                        I 10 C 0
s Trachypithecus_germaini.k141_912491                        18364 1 -     27529 T------------
i Trachypithecus_germaini.k141_912491                    I 10 C 0
s Trachypithecus_obscurus.k141_190785                        28230 1 +     32220 T------------
i Trachypithecus_obscurus.k141_190785                    I 10 C 0
s Trachypithecus_phayrei.ctg124                            5942327 1 +   6242583 T------------
i Trachypithecus_phayrei.ctg124                          I 10 C 0
s Trachypithecus_pileatus.k141_2007326                       11580 1 +     20839 T------------
i Trachypithecus_pileatus.k141_2007326                   I 10 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    1196 3 +     27266 T--------T-T-
i Tragulus_javanicus.TraJav_scaffold_40725               I 4 C 0
s Tupaia_chinensis.KB320699.1                              2157512 4 +   4065304 C--------A-TG
i Tupaia_chinensis.KB320699.1                            I 10 C 0
s Tursiops_truncatus.MRVK01000835.1                       15739285 2 +  33153633 T--------T---
i Tursiops_truncatus.MRVK01000835.1                      I 4 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54633 3 -     77625 T--------A-T-
i Uropsilus_gracilis.UroGra_scaffold_12083               I 4 C 0
s Ursus_maritimus.KK499267.1                               4851786 3 -   5085361 t--------a-t-
i Ursus_maritimus.KK499267.1                             I 14 I 3
s Vicugna_pacos.KN270157.1                                 5373332 3 -   5488506 t--------a-t-
i Vicugna_pacos.KN270157.1                               I 9 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 12179 3 -     43706 T--------A-T-
i Vulpes_lagopus.VulLag_flattened_line_30954             T 1284 C 0
s Xerus_inauris.XerIna_scaffold_2302                          2486 3 +    224448 T--------A-T-
i Xerus_inauris.XerIna_scaffold_2302                     I 2 I 10
s Zapus_hudsonius.ZapHud_scaffold_11398                      16198 3 +     63895 A--------A-T-
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 24 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202 0 +      8798 C
e Galago_senegalensis.k141_631886                             7400 0 +     11339 C
e Galago_moholi.ctg2040                                     429710 0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964 2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445 0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734 0 -     33856 C
e Perodicticus_potto.k141_1186926                              597 0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219 0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Trachypithecus_laotum.k141_907409                          11930 0 -     21137 C
e Trachypithecus_hatinhensis.k141_17719                         27 0 +      9229 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   7643 0 +      8208 C
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73921 0 +    116680 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_42075                     2181 3 -     30804 I
e Rhinolophus_sinicus.LVEH01000134.1                        368295 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53571770 803 +  90668790 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odocoileus_virginianus.KZ100018.1                         145852 291 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869 0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414 0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947 0 - 196305487 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190536 0 +    196477 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           8152 215 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398 7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Megaderma_lyra.MegLyr_scaffold_4542                        14651 0 -    207569 C
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hipposideros_galeritus.HipGal_scaffold_101188                404 0 +      9903 C
e Hipposideros_armiger.JXIK01000431.1                       111834 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689 0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64769 0 +   2246927 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Crocidura_indochinensis.CroInd_scaffold_37019               4143 0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11668671 0 + 224834208 C
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           1799 0 +     23735 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1750 0 -      8501 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538 0 +      5281 C

a score=0.000000
s hg38.chrUn_KI270753v1                                      10093 5 +     62944 TGC----AT
s Allenopithecus_nigroviridis.k141_3361533                   17958 5 -     52922 TGT----AT
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         17893 5 -     28001 TGC----AT
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8388 5 -     18505 TGC----AT
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9241 5 -     12518 TGC----AT
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              9705 5 +     51355 AGC----AT
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                2810 5 -     36483 AGC----AT
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13267 5 +     28687 AGC----AT
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 1735 5 +     27940 AGC----AT
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            2814 5 -      9457 AGC----AT
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             1772 5 +     30492 AGC----AT
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              5765 5 +     47717 AGC----AT
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              2502 5 +      5663 AGC----AT
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             16954 5 +     50774 AGC----AT
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21209966 5 -  21539123 AGC----AC
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               44762 5 -     48001 AGC----AC
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 27566 5 -     30947 AGC----AC
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9338 5 -     89868 AGC----AC
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              13722 5 -     40414 AGC----AC
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                21611 5 +     72325 AGC----AC
i Ateles_paniscus.k141_457735                            C 0 C 0
s Cacajao_ayresi.k141_552049                                102588 5 -    122966 TGC----AT
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   62093 5 +     81800 TGC----AT
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31273 5 -     95584 TGC----AT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55374 5 -    119600 TGC----AT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Carlito_syrichta.NW_007259797.1                           156653 5 -    496798 TAT----TC
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         6151 5 +     31688 TAT----TC
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4478919 5 +   4669795 TGC----AT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3413 5 +     17872 TGC----AT
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4008 5 -     14043 TGC----AT
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12103 5 +     27781 TGC----AT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12253 5 -     20310 TGC----AT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15233 5 +     29689 TGC----AT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            9989 5 -     20078 TGC----AC
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          17904 5 -     27936 TGC----AT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            6771 5 -     17152 TGC----AT
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826503 5 +  39242232 TGC----AT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226007 5 -  21565898 TGC----AT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43126 5 -     53127 TGC----AT
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3376 5 +     13442 TGC----AT
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       17922 5 -     27947 TGC----AT
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                          951 5 +     10558 TGC----AC
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          3956 5 +     14005 TGC----AC
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1194 5 -     17098 TGC----AT
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1070 5 +     17877 TGC----GT
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            158637 5 -    216457 TGT----GT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63112 5 +     76511 TGT----GT
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chiropotes_israelita.k141_747660                           99717 5 +    146308 TGC----AT
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          31525 5 -     50570 TGC----AT
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18431826 5 -  18827391 TGC----AT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18323 5 -     50209 TGC----AT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425327 5 + 135778131 TGC----AT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1913829 4 +   2368649 -GC----AT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952073 8 + 200372422 -GTTTGCAT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40354 4 +     84244 -GT----AT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Erythrocebus_patas.Contig38                             21208499 5 -  21539334 TGC----AT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               3091 5 -      9135 tcc----gt
i Galeopterus_variegatus.GalVar_scaffold_108840          I 215 I 37
s Gorilla_beringei.k141_3596273                              19338 5 -     32273 TGC----AT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341474 5 + 186649187 tgc----at
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hoolock_leuconedys.ctg274                                    438132 5 +    630532 TGC----AT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         15770 5 -     38430 AGC----AT
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     8144 1 -     14121 A--------
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lophocebus_aterrimus.ctg367                              1440461 5 +   1826925 TGC----AT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                              10271 5 +     40492 TGC----AT
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679525 5 +  60120075 TGC----AT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16042 5 -     26193 TGC----AT
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            83818 5 -    114318 tgc----at
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9509 5 -     23192 TGC----AT
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                18973 5 -     29190 TGC----AT
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27551 5 +     37952 TGC----AT
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842628 5 + 187317192 TGC----AT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461206 5 -  25927173 TGC----AT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83407 5 +     89720 TGC----AT
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10400 5 +     20474 TGC----AT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10197 5 -     14993 TGC----AT
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333059 5 -    668171 TGC----AT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8509 5 -     24072 TGC----AT
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29140 5 -     45290 TGC----AT
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23940728 5 -  24302211 TGC----AT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354844 5 +    752769 tgc----at
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Miopithecus_ogouensis.k141_534055                          12404 5 -     28506 TGC----AT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Nasalis_larvatus.k141_413338                               18455 4 +     21681 -GC----AT
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Ochotona_princeps.JH802162.1                             1365572 1 +   3988456 a--------
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67149045 1 + 174332312 A--------
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Pan_paniscus.KQ411613.1                                    47439 5 +     80009 tgc----gt
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146309 5 + 189151597 tgc----at
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                183446534 5 + 183742232 TGC----AT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10184 5 +     20448 TGC----AT
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20566992 5 +  20919399 tgc----at
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   8924 5 +     41871 TGC----AT
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12217 5 +     27711 TGC----AT
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3216 5 -     11374 TGC----AT
i Papio_ursinus.k141_5274964                             C 0 C 0
s Piliocolobus_badius.k141_1142974                            1532 4 +     68526 -GC----AT
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        41678 4 +     89929 -GC----AT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43092 4 +     51399 -GC----AT
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299329 4 -  14605196 -GC----AT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1476471                              4979 5 +     26961 TGC----AT
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1124 5 +     23417 TGC----AT
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                4971 5 +     29694 TGC----AT
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          29997 5 +     52772 TGC----AT
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           4993 5 +     26198 TGC----AT
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3941541 5 +   4542175 TGC----AT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            4957 5 -     23490 TGC----AT
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9213 5 -     39866 TGT----GT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18379 5 +     34906 TGT----GT
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       22641 5 +     87950 TGT----GT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23470 5 +     88961 TGT----GT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9141 5 +     39403 TGT----GT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          22922 5 -     87928 TGT----GT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         29881 5 +     60166 TGT----GT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30078 5 +     67232 TGT----GT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          25551 5 +     90634 TGT----GT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          22923 5 -     89403 TGT----GT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189134450 5 + 189387572 tgc----at
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9574059 5 +   9816681 TGC----AT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76636 4 -     81375 -GC----AT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8453 4 +     19060 -GC----AT
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Pygathrix_cinerea.k141_1153803                             18441 4 -     91421 -GC----AT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612564 4 +   7812017 -GC----AT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18471 4 -     72585 -GC----AT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                            10139 4 -     11128 -GC----AT
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239507 4 - 195417433 -GC----AT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675154 4 +   7961872 -GC----AT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Semnopithecus_entellus.k141_1672505                         3313 4 -     12572 -GC----AT
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30165 4 +     39453 -GC----AT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           10673 4 +     27826 -GC----AT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10214 4 -     19483 -GC----AT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3512 4 -     12762 -GC----AT
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3357 4 +     13763 -GC----AT
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Tarsius_lariang.k141_2201908                               27146 5 +     70052 TAT----TC
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1943 5 -     16117 TAT----TC
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186431840 5 + 186847797 TGC----AT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                         14254 4 -     20410 -GC----AT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3374 4 -     12674 -GC----AT
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14362 4 +     19930 -GC----AT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      10761 4 -     19997 -GC----AT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            50903 4 -     60166 -GC----AT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18365 4 -     27529 -GC----AT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                       0 3 +      9131 --C----AT
i Trachypithecus_leucocephalus.k141_101510               N 0 C 0
s Trachypithecus_obscurus.k141_190785                        28231 4 +     32220 -GC----AT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942328 4 +   6242583 -GC----AT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11581 4 +     20839 -GC----AT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2157516 1 +   4065304 t--------
i Tupaia_chinensis.KB320699.1                            C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202 0 +      8798 C
e Galago_senegalensis.k141_631886                             7400 0 +     11339 C
e Galago_moholi.ctg2040                                     429710 0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964 2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Mus_pahari.LT608297.1                                   31357264 0 -  89631738 C
e Mus_spretus.CM004101.1                                  90755019 0 - 130317789 C
e Mus_musculus.chr8                                       87652530 0 - 129401213 C
e Mus_caroli.LT608237.1                                   84363029 0 - 120012414 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445 0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734 0 -     33856 C
e Perodicticus_potto.k141_1186926                              597 0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219 0 -      3244 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      16201 0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Xerus_inauris.XerIna_scaffold_2302                          2489 10 +    224448 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 12182 0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5373335 0 -   5488506 C
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851789 3 -   5085361 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   54636 0 -     77625 C
e Tursiops_truncatus.MRVK01000835.1                       15739287 0 +  33153633 C
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_40725                    1199 0 +     27266 C
e Trachypithecus_laotum.k141_907409                          11930 0 -     21137 C
e Trachypithecus_hatinhensis.k141_17719                         27 0 +      9229 C
e Tonatia_saurophila.TonSau_scaffold_294                     82583 0 +    610378 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   7643 0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              106773 0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73921 0 +    116680 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                12199 0 +     41958 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6812508 2 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629              19681 0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             32403 3 +     97271 I
e Spermophilus_dauricus.KZ294078.1                         1955493 10 -   3870691 I
e Sorex_araneus.JH798187.1                                13652351 0 -  18376816 C
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_42075                     2181 3 -     30804 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    154524 0 -    313613 C
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                89210 0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        368295 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53571770 803 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  6898 0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20275666 4 -  38429054 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Pteropus_alecto.KB030862.1                              22978120 0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         41947 3 +     42204 I
e Pteronotus_parnellii.KE909381.1                            16519 0 -     21811 C
e Psammomys_obesus.NESX01036370.1                            12283 0 -     21651 C
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             3118 0 +     22620 C
e Phocoena_phocoena.PhoPho_flattened_line_24159              10088 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     29478 0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18196670 0 -  18517816 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14007 0 -     78924 C
e Pantholops_hodgsonii.KE114653.1                          1266298 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4722596 0 -   8748460 C
e Panthera_pardus.KV860321.1                                265716 0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  152507 0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      175393 0 -    191736 C
e Ovis_aries.CM001607.2                                   17587401 0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       463737 0 -    559221 C
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Orcinus_orca.KB316932.1                                  2783045 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    82043 0 +    102263 C
e Ondatra_zibethicus.OndZib_scaffold_46174                   27040 0 +     28053 C
e Okapia_johnstoni.LVCL01S0005463.1                          78142 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145852 291 +    630418 I
e Odobenus_rosmarus.KB229312.1                              508071 3 -   2017862 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869 0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414 0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947 0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9150792 0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    759230 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5867131 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20308928 4 +  31847680 I
e Nannospalax_galili.KL204047.1                            2036818 0 -   3037898 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190536 0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_281845                        1337 0 +      1835 C
e Myotis_lucifugus.GL429869.1                              3905184 0 -   4330536 C
e Myotis_davidii.KB100139.1                                1589085 0 -   6019432 C
e Myotis_brandtii.KE162005.1                                280088 0 -  10118263 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     72505 0 -     80779 C
e Mustela_putorius.JH418006.1                               303134 3 -  14710649 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           8152 215 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398 7 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   2290 0 +     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 143034 0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    28167 0 -    437263 C
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7336 3 -      8324 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             35324 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1851644 0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11262382 0 -  27267610 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                17236 0 -     19307 C
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    4665 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12184099 0 -  29670104 C
e Meriones_unguiculatus.MerUng_scaffold_7390                 34642 0 +    140813 C
e Mellivora_capensis.MelCap_flattened_line_69365             11752 3 +     13704 I
e Megaderma_lyra.MegLyr_scaffold_4542                        14651 0 -    207569 C
e Marmota_marmota.CZRN01000018.1                          33104629 10 -  40650429 I
e Manis_pentadactyla.KN006162.1                              51615 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              19597 0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 92027 0 +     94391 C
e Lycaon_pictus.CM007581.1                                17958014 8 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             269047 0 -    662738 C
e Leptonychotes_weddellii.KB714746.1                       3044468 3 +   3914936 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Lasiurus_borealis.LasBor_scaffold_32767                    17742 15 -     42476 I
e Jaculus_jaculus.JH725527.1                               8278468 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_34779                   9 0 -     31341 C
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7522347 10 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      84442 0 +    135385 C
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23212 0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  46387 0 +     55795 C
e Hipposideros_galeritus.HipGal_scaffold_101188                404 0 +      9903 C
e Hipposideros_armiger.JXIK01000431.1                       111834 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20663551 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 19428 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               243682 0 +    327341 C
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Graphiurus_murinus.GraMur_scaffold_10447                   33968 0 +     78134 C
e Glis_glis.GliGli_scaffold_19807                            32290 0 +     49224 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     610226 0 -    660261 C
e Galagoides_demidoff.k141_1711393                            4689 0 +     41679 C
e Fukomys_damarensis.KN121974.1                             851763 0 +   3816255 C
e Felis_nigripes.FelNig_flattened_line_20823                 10899 4 -     36744 I
e Felis_catus_fca126.CM031415.1                           20197145 4 + 205367284 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Eubalaena_japonica.EubJap_flattened_line_31514             26410 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           12457 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2147975 0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16331033 3 -  41312741 I
e Ellobius_talpinus.LOJH01081419.1                            2319 0 +      8657 C
e Ellobius_lutescens.LOEQ01008920.1                          22399 0 -    110024 C
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       312267 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 34877 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    37741 0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8631485 0 +  20541912 C
e Delphinapterus_leucas.KZ290073.1                        16812784 0 +  35494412 C
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64769 0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_15900             1236 0 -     75252 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  37283 0 +     51376 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             29844 0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_37019               4143 0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11668671 0 + 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_18520                 51890 0 +     63868 C
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           1799 0 +     23735 C
e Condylura_cristata.JH655891.1                           17549381 0 -  53390261 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1254253 0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1750 0 -      8501 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                       101968 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18363086 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18350823 0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     94944 2 +    217609 I
e Castor_canadensis.CasCan_scaffold_2074                    138640 0 +    179628 C
e Carollia_perspicillata.CarPer_scaffold_92756                6487 0 -     11696 C
e Capromys_pilorides.CapPil_scaffold_65020                    2323 0 -     12242 C
e Capra_hircus.CM004588.1                                 18061939 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18831219 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18503076 8 +  63665305 I
e Canis_lupus_familiaris.chr16                            17961774 8 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9037305 8 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     2603 8 -     43241 I
e CanFam4.chr16                                           17801862 8 -  60362399 I
e Camelus_ferus.KB017975.1                                  404584 0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2336286 0 -   7040546 C
e Camelus_bactrianus.KN276810.1                           10003814 0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2821530 3 +   4408762 I
e Bos_taurus.CM000203.6                                   18085576 3 +  45695690 I
e Bos_mutus.JH880303.1                                     1127490 3 -   1948126 I
e Bos_indicus.CM003047.1                                  20274938 3 +  48749331 I
e Bison_bison.KN261452.1                                    201755 3 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    28195 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         3610 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15193145 0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6145 0 +     43469 C
e Arctocebus_calabarensis.k141_1648548                         538 0 +      5281 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      13997 16 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             99585 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      186739 0 +    412891 C
e Ammotragus_lervia.NIVO01071767.1                          677108 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     75732 0 -     89534 C
e Ailurus_fulgens.LNAC01001112.1                             81066 3 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9511986 3 -  29979442 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     72634 0 +     87051 C
e Acinonyx_jubatus.LLWD01001279.1                           828659 4 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      10098 6 +     62944 AAGATA
s Allenopithecus_nigroviridis.k141_3361533                   17963 4 -     52922 AAGA--
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         17898 6 -     28001 AAGATA
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8393 6 -     18505 AAGATA
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9246 6 -     12518 AAGATA
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              9710 5 +     51355 AGGAC-
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                2815 5 -     36483 AAGAC-
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13272 3 +     28687 --GAC-
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 1740 5 +     27940 AAGAC-
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            2819 5 -      9457 AAGAC-
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             1777 5 +     30492 AAGAC-
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              5770 5 +     47717 AAGAC-
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              2507 5 +      5663 AAGAC-
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             16959 5 +     50774 AAGAC-
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21209971 5 -  21539123 AAGAT-
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               44767 5 -     48001 AAGAT-
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 27571 5 -     30947 AAGAT-
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9343 5 -     89868 AAGAT-
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              13727 5 -     40414 AAGAT-
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                21616 5 +     72325 AAGAT-
i Ateles_paniscus.k141_457735                            C 0 C 0
s Cacajao_ayresi.k141_552049                                102593 5 -    122966 AAGAT-
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   62098 5 +     81800 AAGAT-
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31278 5 -     95584 AAGAT-
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55379 5 -    119600 AAGAT-
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Carlito_syrichta.NW_007259797.1                           156658 2 -    496798 A----T
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         6156 2 +     31688 A----T
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4478924 6 +   4669795 AAGATA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3418 6 +     17872 AAGATA
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4013 6 -     14043 AAGATA
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12108 6 +     27781 AAGATA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12258 6 -     20310 AAGATA
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15238 6 +     29689 AAGATA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                            9994 6 -     20078 AAGATA
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          17909 6 -     27936 AAGATA
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            6776 6 -     17152 AAGATA
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826508 6 +  39242232 AAGATA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226012 6 -  21565898 AAGATA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43131 6 -     53127 AAGATA
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3381 6 +     13442 AAGATA
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       17927 6 -     27947 AAGATA
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                          956 6 +     10558 AAGATA
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          3961 6 +     14005 AAGATA
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1199 5 -     17098 AAGAT-
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1075 5 +     17877 AAGAT-
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            158642 5 -    216457 AAGAT-
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63117 5 +     76511 AAGAT-
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chiropotes_israelita.k141_747660                           99722 5 +    146308 AAGAT-
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          31530 5 -     50570 AAGAT-
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18431831 6 -  18827391 AAGATA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18328 6 -     50209 AAGATA
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425332 6 + 135778131 aagata
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1913833 6 +   2368649 aagata
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952081 6 + 200372422 AAGATA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40358 6 +     84244 AAGATA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Erythrocebus_patas.Contig38                             21208504 6 -  21539334 AAGATA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               3133 2 -      9135 a----t
i Galeopterus_variegatus.GalVar_scaffold_108840          I 37 I 573
s Gorilla_beringei.k141_3596273                              19343 6 -     32273 AAGATA
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341479 6 + 186649187 aagata
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hoolock_leuconedys.ctg274                                    438137 6 +    630532 AAGATA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         15775 5 -     38430 AAGAT-
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lophocebus_aterrimus.ctg367                              1440466 6 +   1826925 AAGATA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                              10276 6 +     40492 AAGATA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679530 6 +  60120075 AAGATA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16047 6 -     26193 AAGATA
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            83823 6 -    114318 aagata
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9514 6 -     23192 AAGATA
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                18978 6 -     29190 AAGATA
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27556 6 +     37952 AAGATA
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842633 6 + 187317192 AAGATA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461211 6 -  25927173 AAGATA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83412 6 +     89720 AAGATA
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10405 6 +     20474 AAGATA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10202 6 -     14993 AAGATA
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333064 6 -    668171 AAGATA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8514 6 -     24072 AAGATA
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29145 6 -     45290 AAGATA
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23940733 6 -  24302211 AAGATA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354849 6 +    752769 aagata
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Miopithecus_ogouensis.k141_534055                          12409 6 -     28506 AAGATA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Nasalis_larvatus.k141_413338                               18459 6 +     21681 AAGATA
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Pan_paniscus.KQ411613.1                                    47444 6 +     80009 aagata
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146314 6 + 189151597 aagata
i Pan_troglodytes.CM009242.2                             C 0 I 12
s Papio_anubis.CM001495.2                                183446539 6 + 183742232 AAGATA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10189 6 +     20448 AAGATA
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20566997 6 +  20919399 aagata
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   8929 6 +     41871 AAGATA
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12222 6 +     27711 AAGATA
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3221 6 -     11374 AAGATA
i Papio_ursinus.k141_5274964                             C 0 C 0
s Piliocolobus_badius.k141_1142974                            1536 6 +     68526 AAGATA
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        41682 6 +     89929 AAGATA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43096 6 +     51399 AAGATA
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299333 6 -  14605196 AAgata
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1476471                              4984 5 +     26961 AAGAT-
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1129 5 +     23417 AAGAT-
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                4976 5 +     29694 AAGAT-
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          30002 5 +     52772 AAGAT-
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           4998 5 +     26198 AAGAT-
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3941546 5 +   4542175 AAGAT-
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            4962 5 -     23490 AAGAT-
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9218 5 -     39866 AAGAT-
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18384 5 +     34906 AAGAT-
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       22646 5 +     87950 AAGAT-
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23475 5 +     88961 AAGAT-
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9146 5 +     39403 AAGAT-
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          22927 5 -     87928 AAGAT-
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         29886 5 +     60166 AAGAT-
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30083 5 +     67232 AAGAT-
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          25556 5 +     90634 AAGAT-
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          22928 5 -     89403 AAGAT-
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189134455 6 + 189387572 aagata
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9574064 6 +   9816681 AAGata
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76640 6 -     81375 AAGATA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8457 6 +     19060 AAGATA
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Pygathrix_cinerea.k141_1153803                             18445 6 -     91421 AAGATA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612568 6 +   7812017 AAGATA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18475 6 -     72585 AAGATA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                            10143 6 -     11128 AAGATA
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239511 6 - 195417433 aagata
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675158 6 +   7961872 AATATA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Semnopithecus_entellus.k141_1672505                         3317 6 -     12572 AAGATA
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30169 6 +     39453 AAGATA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           10677 6 +     27826 AAGATG
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10218 6 -     19483 AAGATA
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3516 6 -     12762 AATATA
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3361 6 +     13763 AAGATA
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Tarsius_lariang.k141_2201908                               27151 2 +     70052 A----T
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1948 2 -     16117 A----T
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186431845 6 + 186847797 AAGATA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                         14258 6 -     20410 AAGATA
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3378 6 -     12674 AAGATA
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14366 6 +     19930 AAGATA
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      10765 6 -     19997 AAGATA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            50907 6 -     60166 AAGATA
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18369 6 -     27529 AAGATA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                       3 6 +      9131 AAGATA
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28235 6 +     32220 AAGATA
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942332 6 +   6242583 AAGATA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11585 6 +     20839 AAGATA
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202 0 +      8798 C
e Galago_senegalensis.k141_631886                             7400 0 +     11339 C
e Galago_moholi.ctg2040                                     429710 0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964 2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Mus_pahari.LT608297.1                                   31357264 0 -  89631738 C
e Mus_spretus.CM004101.1                                  90755019 0 - 130317789 C
e Mus_musculus.chr8                                       87652530 0 - 129401213 C
e Mus_caroli.LT608237.1                                   84363029 0 - 120012414 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445 0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734 0 -     33856 C
e Perodicticus_potto.k141_1186926                              597 0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219 0 -      3244 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      16201 0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Xerus_inauris.XerIna_scaffold_2302                          2489 10 +    224448 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 12182 0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5373335 0 -   5488506 C
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851789 3 -   5085361 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   54636 0 -     77625 C
e Tursiops_truncatus.MRVK01000835.1                       15739287 0 +  33153633 C
e Tupaia_chinensis.KB320699.1                              2157517 0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_40725                    1199 0 +     27266 C
e Trachypithecus_laotum.k141_907409                          11930 0 -     21137 C
e Trachypithecus_hatinhensis.k141_17719                         27 0 +      9229 C
e Tonatia_saurophila.TonSau_scaffold_294                     82583 0 +    610378 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   7643 0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              106773 0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73921 0 +    116680 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                12199 0 +     41958 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6812508 2 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629              19681 0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             32403 3 +     97271 I
e Spermophilus_dauricus.KZ294078.1                         1955493 10 -   3870691 I
e Sorex_araneus.JH798187.1                                13652351 0 -  18376816 C
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_42075                     2181 3 -     30804 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    154524 0 -    313613 C
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                89210 0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        368295 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53571770 803 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  6898 0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20275666 4 -  38429054 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Pteropus_alecto.KB030862.1                              22978120 0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         41947 3 +     42204 I
e Pteronotus_parnellii.KE909381.1                            16519 0 -     21811 C
e Psammomys_obesus.NESX01036370.1                            12283 0 -     21651 C
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             3118 0 +     22620 C
e Phocoena_phocoena.PhoPho_flattened_line_24159              10088 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_42190                     29478 0 -     29689 C
e Peromyscus_maniculatus.KI615324.1                       18196670 0 -  18517816 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14007 0 -     78924 C
e Pantholops_hodgsonii.KE114653.1                          1266298 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4722596 0 -   8748460 C
e Panthera_pardus.KV860321.1                                265716 0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  152507 0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      175393 0 -    191736 C
e Ovis_aries.CM001607.2                                   17587401 0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       463737 0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                        67149046 0 + 174332312 C
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Orcinus_orca.KB316932.1                                  2783045 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    82043 0 +    102263 C
e Ondatra_zibethicus.OndZib_scaffold_46174                   27040 0 +     28053 C
e Okapia_johnstoni.LVCL01S0005463.1                          78142 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         145852 291 +    630418 I
e Odobenus_rosmarus.KB229312.1                              508071 3 -   2017862 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Ochotona_princeps.JH802162.1                             1365573 0 +   3988456 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869 0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414 0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947 0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9150792 0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    759230 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5867131 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20308928 4 +  31847680 I
e Nannospalax_galili.KL204047.1                            2036818 0 -   3037898 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190536 0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_281845                        1337 0 +      1835 C
e Myotis_lucifugus.GL429869.1                              3905184 0 -   4330536 C
e Myotis_davidii.KB100139.1                                1589085 0 -   6019432 C
e Myotis_brandtii.KE162005.1                                280088 0 -  10118263 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     72505 0 -     80779 C
e Mustela_putorius.JH418006.1                               303134 3 -  14710649 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           8152 215 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398 7 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   2290 0 +     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 143034 0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    28167 0 -    437263 C
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7336 3 -      8324 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             35324 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1851644 0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11262382 0 -  27267610 C
e Micronycteris_hirsuta.MicHir_scaffold_52381                17236 0 -     19307 C
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    4665 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12184099 0 -  29670104 C
e Meriones_unguiculatus.MerUng_scaffold_7390                 34642 0 +    140813 C
e Mellivora_capensis.MelCap_flattened_line_69365             11752 3 +     13704 I
e Megaderma_lyra.MegLyr_scaffold_4542                        14651 0 -    207569 C
e Marmota_marmota.CZRN01000018.1                          33104629 10 -  40650429 I
e Manis_pentadactyla.KN006162.1                              51615 0 -    317179 C
e Manis_javanica.JSZB01003497.1                              19597 0 +    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_8222                 92027 0 +     94391 C
e Lycaon_pictus.CM007581.1                                17958014 8 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             269047 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     8145 0 -     14121 C
e Leptonychotes_weddellii.KB714746.1                       3044468 3 +   3914936 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Lasiurus_borealis.LasBor_scaffold_32767                    17742 15 -     42476 I
e Jaculus_jaculus.JH725527.1                               8278468 0 -   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_34779                   9 0 -     31341 C
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7522347 10 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      84442 0 +    135385 C
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23212 0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  46387 0 +     55795 C
e Hipposideros_galeritus.HipGal_scaffold_101188                404 0 +      9903 C
e Hipposideros_armiger.JXIK01000431.1                       111834 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20663551 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 19428 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               243682 0 +    327341 C
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Graphiurus_murinus.GraMur_scaffold_10447                   33968 0 +     78134 C
e Glis_glis.GliGli_scaffold_19807                            32290 0 +     49224 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                     610226 0 -    660261 C
e Galagoides_demidoff.k141_1711393                            4689 0 +     41679 C
e Fukomys_damarensis.KN121974.1                             851763 0 +   3816255 C
e Felis_nigripes.FelNig_flattened_line_20823                 10899 4 -     36744 I
e Felis_catus_fca126.CM031415.1                           20197145 4 + 205367284 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Eubalaena_japonica.EubJap_flattened_line_31514             26410 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           12457 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2147975 0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16331033 3 -  41312741 I
e Ellobius_talpinus.LOJH01081419.1                            2319 0 +      8657 C
e Ellobius_lutescens.LOEQ01008920.1                          22399 0 -    110024 C
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       312267 0 +    607251 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 34877 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    37741 0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8631485 0 +  20541912 C
e Delphinapterus_leucas.KZ290073.1                        16812784 0 +  35494412 C
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64769 0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_15900             1236 0 -     75252 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  37283 0 +     51376 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             29844 0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_37019               4143 0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11668671 0 + 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_18520                 51890 0 +     63868 C
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           1799 0 +     23735 C
e Condylura_cristata.JH655891.1                           17549381 0 -  53390261 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1254253 0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1750 0 -      8501 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                       101968 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18363086 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18350823 0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     94944 2 +    217609 I
e Castor_canadensis.CasCan_scaffold_2074                    138640 0 +    179628 C
e Carollia_perspicillata.CarPer_scaffold_92756                6487 0 -     11696 C
e Capromys_pilorides.CapPil_scaffold_65020                    2323 0 -     12242 C
e Capra_hircus.CM004588.1                                 18061939 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18831219 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18503076 8 +  63665305 I
e Canis_lupus_familiaris.chr16                            17961774 8 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9037305 8 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     2603 8 -     43241 I
e CanFam4.chr16                                           17801862 8 -  60362399 I
e Camelus_ferus.KB017975.1                                  404584 0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2336286 0 -   7040546 C
e Camelus_bactrianus.KN276810.1                           10003814 0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2821530 3 +   4408762 I
e Bos_taurus.CM000203.6                                   18085576 3 +  45695690 I
e Bos_mutus.JH880303.1                                     1127490 3 -   1948126 I
e Bos_indicus.CM003047.1                                  20274938 3 +  48749331 I
e Bison_bison.KN261452.1                                    201755 3 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    28195 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         3610 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15193145 0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6145 0 +     43469 C
e Arctocebus_calabarensis.k141_1648548                         538 0 +      5281 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      13997 16 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469             99585 0 -    100397 C
e Anoura_caudifer.AnoCau_scaffold_1412                      186739 0 +    412891 C
e Ammotragus_lervia.NIVO01071767.1                          677108 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     75732 0 -     89534 C
e Ailurus_fulgens.LNAC01001112.1                             81066 3 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9511986 3 -  29979442 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     72634 0 +     87051 C
e Acinonyx_jubatus.LLWD01001279.1                           828659 4 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      10104 13 +     62944 TAT-ATTCAT-TT---T-------T
s Acomys_cahirinus.AcoCah_scaffold_12655                     72634  1 +     87051 ------------G------------
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511989  6 -  29979442 -----------ataa-c-------a
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 3 I 5
s Ailurus_fulgens.LNAC01001112.1                             81069  6 -    347723 -----------ataa-c-------a
i Ailurus_fulgens.LNAC01001112.1                         I 3 I 5
s Allactaga_bullata.AllBul_scaffold_9566                     75732  3 -     89534 ------------T---A-------T
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   17967 13 -     52922 TAT-ATTCAT-TT---T-------T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         17904 13 -     28001 TAT-ATTCAT-TT---T-------T
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8399 13 -     18505 TAT-ATTCAT-TT---T-------T
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9252 13 -     12518 TAT-ATTCAT-TT---T-------T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              9715 13 +     51355 TAT-ATTCAT-TT---T-------T
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                2820 13 -     36483 TAT-ATTCAT-TT---T-------C
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13275 13 +     28687 TAT-ATTCAT-TT---T-------T
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 1745 13 +     27940 TAT-ATTCAT-TT---T-------C
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            2824 13 -      9457 TAT-ATTCAT-TT---T-------C
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             1782 13 +     30492 TAT-ATTCAT-TT---T-------C
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              5775 13 +     47717 TAT-ATTCAT-TT---T-------T
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              2512 13 +      5663 TAT-ATTCAT-TT---T-------C
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             16964 13 +     50774 TAT-ATTCAT-TT---T-------C
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          677108  8 -   2318259 ------atat-tt---t-------g
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 3
s Anoura_caudifer.AnoCau_scaffold_1412                      186739  8 +    412891 ------TTAT-AT---T-------A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 3
s Antilocapra_americana.AntAmePen_scaffold_12469             99585  8 -    100397 ------ATAT-TT---T-------G
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 I 3
s Aplodontia_rufa.AprRuf_scaffold_68852                      14013  3 +     20879 ------------T---A-------T
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 16 I 14
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6145  8 +     43469 ------TTAT-AT---T-------A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 3
s Ateles_geoffroyi_b.tarseq_1536                             21209976 13 -  21539123 TAT-ATTCAT-TT---T-------T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               44772 13 -     48001 TAT-ATTCAT-TT---T-------T
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 27576 13 -     30947 TAT-ATTCAT-TT---T-------T
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9348 13 -     89868 TAT-ATTCAT-TT---T-------T
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              13732 13 -     40414 TAT-ATTCAT-TT---T-------T
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                21621 13 +     72325 TAT-ATTCAT-TT---T-------T
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193145  8 +  23207421 ------acat-tt---c-------a
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 3
s Balaenoptera_bonaerensis.DF707048.1                         3610  8 -     18090 ------acat-tt---c-------a
i Balaenoptera_bonaerensis.DF707048.1                    C 0 I 3
s Beatragus_hunteri.BeaHun_scaffold_50177                    28195  8 +     34529 ------ATAT-TT---T-------G
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 3
s Bison_bison.KN261452.1                                    201758  1 -    288883 ------------------------T
i Bison_bison.KN261452.1                                 I 3 I 3
s Bos_indicus.CM003047.1                                  20274941  1 +  48749331 ------------------------T
i Bos_indicus.CM003047.1                                 I 3 I 3
s Bos_mutus.JH880303.1                                     1127493  1 -   1948126 ------------------------t
i Bos_mutus.JH880303.1                                   I 3 I 3
s Bos_taurus.CM000203.6                                   18085579  1 +  45695690 ------------------------T
i Bos_taurus.CM000203.6                                  I 3 I 3
s Bubalus_bubalis.KI419123.1                               2821533  1 +   4408762 ------------------------t
i Bubalus_bubalis.KI419123.1                             I 3 I 7
s Cacajao_ayresi.k141_552049                                102598 13 -    122966 TAT-ATTCAT-TT---T-------T
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   62103 13 +     81800 TAT-ATTCAT-TT---T-------T
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31283 13 -     95584 TAT-ATTCAT-TT---T-------T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55384 13 -    119600 TAT-ATTCAT-TT---T-------T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10003814  8 -  17673402 ------atat-tc---a-------a
i Camelus_bactrianus.KN276810.1                          C 0 I 3
s Camelus_dromedarius.KN272107.1                           2336286  8 -   7040546 ------atat-tc---a-------a
i Camelus_dromedarius.KN272107.1                         C 0 I 3
s Camelus_ferus.KB017975.1                                  404584  8 -   1652518 ------atat-tc---a-------a
i Camelus_ferus.KB017975.1                               C 0 I 3
s CanFam4.chr16                                           17801870  2 -  60362399 -------------aaac-------a
i CanFam4.chr16                                          I 8 I 5
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     2611  2 -     43241 -------------aaac-------a
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 8 I 5
s Canis_lupus_dingo.QKWQ01000480.1                         9037313  2 -   9314153 -------------aaac-------a
i Canis_lupus_dingo.QKWQ01000480.1                       I 8 I 5
s Canis_lupus_familiaris.chr16                            17961782  2 -  59632846 -------------aaac-------a
i Canis_lupus_familiaris.chr16                           I 8 I 5
s Canis_lupus_orion.HG994398.1                            18503084  2 +  63665305 -------------aaac-------a
i Canis_lupus_orion.HG994398.1                           I 8 I 5
s Capra_aegagrus.CM003241.1                               18831219  8 +  46296322 ------atat-tt---t-------g
i Capra_aegagrus.CM003241.1                              C 0 I 3
s Capra_hircus.CM004588.1                                 18061939  8 -  44709034 ------atat-tt---t-------g
i Capra_hircus.CM004588.1                                C 0 I 3
s Capromys_pilorides.CapPil_scaffold_65020                    2323  3 -     12242 ------------C---A-------T
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           156660 11 -    496798 TAT-ATAgat-at------------
i Carlito_syrichta.NW_007259797.1                        C 0 I 1
s Carollia_perspicillata.CarPer_scaffold_92756                6487  7 -     11696 ------TTGT-AT---T--------
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 4
s Castor_canadensis.CasCan_scaffold_2074                    138640  2 +    179628 ------------T---A--------
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     94946  8 +    217609 ------ATCT-TC---T-------A
i Catagonus_wagneri.CatWag_scaffold_2839                 I 2 I 2
s Cephalopachus_bancanus.k141_1423433                         6158 11 +     31688 TAT-ATAGAT-AT------------
i Cephalopachus_bancanus.k141_1423433                    C 0 I 1
s Cercocebus_atys.KQ010504.1                               4478930 13 +   4669795 TAT-ACtcat-tt---t-------t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3424 13 +     17872 TAT-ACTCAT-TT---T-------T
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4019 13 -     14043 TAT-ACTCAT-TT---T-------T
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12114 13 +     27781 TAT-ACTCAT-TT---T-------T
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12264 13 -     20310 TAT-ATTCAT-TT---T-------T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15244 13 +     29689 TAT-ATTCAT-TT---T-------T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10000 13 -     20078 TAT-ATTCAT-TT---T-------T
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          17915 13 -     27936 TAT-ATTCAT-TT---T-------T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            6782 13 -     17152 TAT-ATTCAT-TT---T-------T
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826514 13 +  39242232 TAT-ATTCAT-TT---T-------T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226018 13 -  21565898 TAT-ATTCAT-TT---T-------T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43137 13 -     53127 TAT-ATTCAT-TT---T-------T
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3387 13 +     13442 TAT-ATTCAT-TT---T-------T
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       17933 13 -     27947 TAT-ATTCAT-TT---T-------T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                          962 13 +     10558 TAT-ATTCAT-TT---T-------T
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          3967 13 +     14005 TAT-ATTCAT-TT---T-------T
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1204 13 -     17098 TAT-ATTCAT-TT---T-------T
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1080 13 +     17877 TAT-ATTCAT-TT---T-------T
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            158647 13 -    216457 TAT-ATTCAT-TT---T-------T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63122 13 +     76511 TAT-ATTCAT-TT---T-------T
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254253  3 +   2543920 ------------t---a-------t
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_israelita.k141_747660                           99727 13 +    146308 TAT-ATTCAT-TT---T-------T
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          31535 13 -     50570 TAT-ATTCAT-TT---T-------T
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18431837 13 -  18827391 TAT-ATTCAT-TT---T-------T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18334 13 -     50209 TAT-ATTCAT-TT---T-------T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425338 13 + 135778131 tat-attcat-tt---t-------t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1913839 13 +   2368649 tat-attcat-tt---t-------t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952087 13 + 200372422 TAT-ATTCAT-TT---T-------T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40364 13 +     84244 TAT-ATTCAT-TT---T-------T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549381  8 -  53390261 ------TAAT-AT---C-------A
i Condylura_cristata.JH655891.1                          C 0 I 5
s Cricetomys_gambianus.CriGam_scaffold_18520                 51890  1 +     63868 ------------G------------
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29844  8 -     87169 ------TTGT-AT---T-------A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 5
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37283  3 +     51376 ------------C---G-------T
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16812784  2 +  35494412 ----------------t-------a
i Delphinapterus_leucas.KZ290073.1                       C 0 I 3
s Dasyprocta_punctata.DasPun_flattened_line_15900             1236  1 -     75252 ------------T------------
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8631485  8 +  20541912 ------TTAT-AT---T-------A
i Desmodus_rotundus.KZ672289.1                           C 0 I 3
s Dinomys_branickii.DinBra_scaffold_21862                    37741  3 +     67921 ------------T---A-------T
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       312267  8 +    607251 ------atat-tt---t-------g
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 3
s Ellobius_lutescens.LOEQ01008920.1                          22399  1 -    110024 ------------g------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                            2319  1 +      8657 ------------g------------
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16331036  6 -  41312741 -----------ataa-c-------a
i Enhydra_lutris.KZ291758.1                              I 3 I 5
s Eptesicus_fuscus.JH977646.1                              2147975  8 -  14770903 ------NNNN-NN---N-------N
i Eptesicus_fuscus.JH977646.1                            C 0 I 500
s Erythrocebus_patas.Contig38                             21208510 13 -  21539334 TAT-ATTCAT-TT---T-------T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12457  8 +    133382 ------ACAT-TT---T-------A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 3
s Eubalaena_japonica.EubJap_flattened_line_31514             26410  8 -     44125 ------ATAT-TT---T-------A
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 I 3
s Fukomys_damarensis.KN121974.1                             851763  3 +   3816255 ------------T---a-------t
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               3708 13 -      9135 TAT-ATTTAT-TT---A-------T
i Galeopterus_variegatus.GalVar_scaffold_108840          I 573 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     610226  8 -    660261 ------atat-tt---t-------g
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 I 3
s Glis_glis.GliGli_scaffold_19807                            32290  2 +     49224 ----------------A-------C
i Glis_glis.GliGli_scaffold_19807                        C 0 I 2
s Gorilla_beringei.k141_3596273                              19349 13 -     32273 TAT-ATTCAT-TT---T-------T
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341485 13 + 186649187 tat-attcat-tt---t-------t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33968  3 +     78134 ------------T---A-------T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 2
s Helogale_parvula.HelPar_flattened_line_2585               243682  8 +    327341 ------TCAT-AT---T-------C
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 5
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 19428  8 +     36099 ------ATAT-TT---T-------G
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 I 3
s Heterocephalus_glaber.JH602082.1                        20663551  3 +  22651954 ------------T---A-------t
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hoolock_leuconedys.ctg274                                    438143 13 +    630532 TAT-ATTAAT-TT---T-------T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46387  8 +     55795 ------TCAT-AT---T-------A
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 5
s Hystrix_cristata.HysCri_scaffold_5660                      84442  3 +    135385 ------------T---A-------T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7522357  3 -   7955117 ------------t---a-------t
i Ictidomys_tridecemlineatus.JH393364.1                  I 10 I 13
s Inia_geoffrensis.IniGeo_flattened_line_34779                   9  9 -     31341 ----------------TATATTTTA
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 I 3
s Jaculus_jaculus.JH725527.1                               8278468  3 -   9596543 ------------t---a-------t
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         15780 13 -     38430 TAT-ATTCAT-TT---T-------T
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_50988                    16504  5 +     29960 ---------T-AT---T-------A
i Lasiurus_borealis.LasBor_scaffold_50988                I 72 I 518
s Leptonychotes_weddellii.KB714746.1                       3044471  6 +   3914936 -----------ataa-c-------a
i Leptonychotes_weddellii.KB714746.1                     I 3 I 5
s Lepus_americanus.LepAme_scaffold_107385                     8145 14 -     14121 CATGTTTTAT-TT---G-------T
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             269047  9 -    662738 ----------------tatatttta
i Lipotes_vexillifer.KE559953.1                          C 0 I 3
s Lophocebus_aterrimus.ctg367                              1440472 13 +   1826925 TAT-ACTCAT-TT---T-------T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17958022  2 -  59628241 -------------aaac-------a
i Lycaon_pictus.CM007581.1                               I 8 I 5
s Macaca_arctoides.k141_2326796                              10282 13 +     40492 TAT-ACTCAT-TT---T-------T
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679536 13 +  60120075 TAT-ACTCAT-TT---T-------T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16053 13 -     26193 TAT-ACTCAT-TT---T-------T
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            83829 13 -    114318 tat-actcat-tt---t-------t
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9520 13 -     23192 TAT-ACTCAT-TT---T-------T
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                18984 13 -     29190 TAT-ACTCAT-TT---T-------T
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27562 13 +     37952 TAT-ACTCAT-TT---T-------T
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842639 13 + 187317192 TAT-ACtcat-tt---t-------t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461217 13 -  25927173 TAT-ACtcat-tt---t-------t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83418 13 +     89720 TAT-ACTCAT-TT---T-------T
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10411 13 +     20474 TAT-ACTCAT-TT---T-------T
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10208 13 -     14993 TAT-ACTCAT-TT---T-------T
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333070 13 -    668171 TAT-ACTCAT-TT---T-------T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8520 13 -     24072 TAT-ACTCAT-TT---T-------T
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29151 13 -     45290 TAT-ACTCAT-TT---T-------T
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92027  8 +     94391 ------TTGTTAT---C--------
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 1
s Mandrillus_leucophaeus.scaffold280                      23940739 13 -  24302211 TAT-ACTCAT-TT---T-------T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354855 13 +    752769 tat-actcat-tt---t-------t
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              19597  8 +    737560 ------tgat-gt---t-------a
i Manis_javanica.JSZB01003497.1                          C 0 I 129
s Manis_pentadactyla.KN006162.1                              51615  8 -    317179 ------tgat-gt---t-------a
i Manis_pentadactyla.KN006162.1                          C 0 I 129
s Marmota_marmota.CZRN01000018.1                          33104639  3 -  40650429 ------------t---a-------t
i Marmota_marmota.CZRN01000018.1                         I 10 I 12
s Mellivora_capensis.MelCap_flattened_line_69365             11755  6 +     13704 -----------AT-AAC-------A
i Mellivora_capensis.MelCap_flattened_line_69365         I 3 I 5
s Mesoplodon_bidens.MesBid_scaffold_108144                    4665  9 +     10310 ----------------TATATTTTA
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 I 3
s Meriones_unguiculatus.MerUng_scaffold_7390                 34642  1 +    140813 ------------G------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12184099  1 -  29670104 ------------g------------
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                17236  8 -     19307 ------TTAT-AT---T-------G
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 3
s Microtus_ochrogaster.CM001695.1                         11262382  1 -  27267610 ------------g------------
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1851644  8 +   8254450 ------ttat-at---t-------a
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 3
s Miniopterus_schreibersii.MinSch_scaffold_18080             35324  8 +     64694 ------TTAT-AT---T-------A
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 3
s Miopithecus_ogouensis.k141_534055                          12415 13 -     28506 TAT-ATTCAT-TT---T-------T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         7339  6 -      8324 -----------ataa-c-------a
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 3 I 5
s Monodon_monoceros.MonMon_M_scaffold_103                    28167  2 -    437263 ----------------T-------A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 3
s Mormoops_blainvillei.MorMeg_scaffold_1417                 143034  8 -    366855 ------TTAT-AT---T-------A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 4
s Moschus_moschiferus.MosMos_scaffold_13123                   2290  8 +     82753 ------ATAT-TT---T-------G
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 3
s Mus_caroli.LT608237.1                                   84363029  1 - 120012414 ------------a------------
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87652530  1 - 129401213 ------------A------------
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31357264  1 -  89631738 ------------a------------
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90755019  1 - 130317789 ------------a------------
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               303137  6 -  14710649 -----------AT-AAC-------A
i Mustela_putorius.JH418006.1                            I 3 I 5
s Myocastor_coypus.MyoCoy_scaffold_10123                     72505  3 -     80779 ------------C---A-------T
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                280088  8 -  10118263 ------ttat-at---t-------a
i Myotis_brandtii.KE162005.1                             C 0 I 2104
s Myotis_davidii.KB100139.1                                1589085  8 -   6019432 ------ttct-at---t-------a
i Myotis_davidii.KB100139.1                              C 0 I 319
s Myotis_lucifugus.GL429869.1                              3905184  8 -   4330536 ------ttat-at---t-------a
i Myotis_lucifugus.GL429869.1                            C 0 I 318
s Myotis_myotis.MyoMyo_scaffold_281845                        1337  8 +      1835 ------TTCT-AT---T-------A
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 I 319
s Nannospalax_galili.KL204047.1                            2036818  1 -   3037898 ------------g------------
i Nannospalax_galili.KL204047.1                          C 0 I 4
s Nasalis_larvatus.k141_413338                               18465 13 +     21681 TAT-ATTCAT-TT---T-------T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308932  6 +  31847680 -----------ataa-c-------a
i Neomonachus_schauinslandi.NINY01007730.1               I 4 I 5
s Neophocaena_asiaeorientalis.KZ687982.1                   5867131  2 +   7148211 ----------------T-------T
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 3
s Noctilio_leporinus.NocLep_scaffold_251                    759230  8 +    783361 ------TTAT-AT---C-------A
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 1
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150792 10 -   9404916 ------ttat-atta-t-------a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 1159
s Ochotona_princeps.JH802162.1                             1365573 14 +   3988456 tgttatatgt-at---t-------t
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              508074  6 -   2017862 -----------ataa-c-------a
i Odobenus_rosmarus.KB229312.1                           I 3 I 5
s Okapia_johnstoni.LVCL01S0005463.1                          78142  8 -    150152 ------atat-tt---t-------g
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 3
s Orcinus_orca.KB316932.1                                  2783045  2 -  10937097 ----------------T-------A
i Orcinus_orca.KB316932.1                                C 0 I 3
s Ondatra_zibethicus.OndZib_scaffold_46174                   27040  1 +     28053 ------------G------------
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    82043  1 +    102263 ------------G------------
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67149046 14 + 174332312 TAtggtttat-tt---g-------t
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       463737 10 -    559221 ------ttat-atta-t-------a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 1638
s Ovis_aries.CM001607.2                                   17587401  8 +  44047080 ------atat-tt---t-------g
i Ovis_aries.CM001607.2                                  C 0 I 3
s Ovis_canadensis.OviCan_scaffold_2572                      175393  8 -    191736 ------ATAT-TT---T-------G
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 I 3
s Pan_paniscus.KQ411613.1                                    47450 13 +     80009 tat-attcat-tt---t-------t
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.KZ622849.1                                 25639 13 +    110857 tat-attcat-tt---t-------t
i Pan_troglodytes.KZ622849.1                             I 130 I 2
s Panthera_onca.PanOnc_flattened_line_3271                  152507  1 +    230217 ------T------------------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 4
s Panthera_pardus.KV860321.1                                265716  1 +  18783137 ------t------------------
i Panthera_pardus.KV860321.1                             C 0 I 4
s Panthera_tigris.KE722367.1                               4722596  1 -   8748460 ------t------------------
i Panthera_tigris.KE722367.1                             C 0 I 4
s Pantholops_hodgsonii.KE114653.1                          1266298  8 -   2937107 ------atat-ct---t-------g
i Pantholops_hodgsonii.KE114653.1                        C 0 I 3
s Papio_anubis.CM001495.2                                183446545 13 + 183742232 TAT-ACtcat-tt---t-------t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10195 13 +     20448 TAT-ACTCAT-TT---T-------T
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567003 13 +  20919399 tat-actcat-tt---t-------t
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   8935 13 +     41871 TAT-ACTCAT-TT---T-------T
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12228 13 +     27711 TAT-ACTCAT-TT---T-------T
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3227 13 -     11374 TAT-ACTCAT-TT---T-------T
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14007  8 -     78924 ------TTAT-TT---C-------A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 5
s Peromyscus_maniculatus.KI615324.1                       18196670  1 -  18517816 ------------g------------
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     29478  3 -     29689 ------------T---A-------T
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              10088  2 +     63832 ----------------T-------T
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 3
s Piliocolobus_badius.k141_1142974                            1542 13 +     68526 TAC-ATTCAT-TT---T-------T
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        41688 13 +     89929 TAC-ATTCAT-TT---T-------T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43102 13 +     51399 TAC-ATTCAT-TT---T-------T
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299339 13 -  14605196 tac-attcat-tt---t-------t
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3118  8 +     22620 ------ATAT-AT---T-------A
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 11
s Pithecia_albicans.k141_1476471                              4989 13 +     26961 TAT-ATTCAT-TT---T-------T
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1134 13 +     23417 TAT-ATTCAT-TT---T-------T
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                4981 13 +     29694 TAT-ATTCAT-TT---T-------T
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          30007 13 +     52772 TAT-ATTCAT-TT---T-------T
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           5003 13 +     26198 TAT-ATTCAT-TT---T-------T
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3941551 13 +   4542175 TAT-ATTCAT-TT---T-------T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            4967 13 -     23490 TAT-ATTCAT-TT---T-------T
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9223 13 -     39866 TAT-ATTCAT-TT---T-------T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18389 13 +     34906 TAT-ATTCAT-TT---T-------T
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       22651 13 +     87950 TAT-ATTCAT-TT---T-------T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23480 13 +     88961 TAT-ATTCAT-TT---T-------T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9151 13 +     39403 TAT-ATTCAT-TT---T-------T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          22932 13 -     87928 TAT-ATTCAT-TT---T-------T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         29891 13 +     60166 TAT-ATTCAT-TT---T-------T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30088 13 +     67232 TAT-ATTCAT-TT---T-------T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          25561 13 +     90634 TAT-ATTCAT-TT---T-------T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          22933 13 -     89403 TAT-ATTCAT-TT---T-------T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189134461 13 + 189387572 tat-attcat-tt---t-------t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9574070 13 +   9816681 tat-attcat-tt---t-------t
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Psammomys_obesus.NESX01036370.1                            12283  1 -     21651 ------------g------------
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Presbytis_comata.k141_677006                               76646  9 -     81375 TAT-ATTCAT---------------
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8463  9 +     19060 TAT-ATTCAT---------------
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Pteronotus_parnellii.KE909381.1                            16519  8 -     21811 ------ttat-ag---t-------a
i Pteronotus_parnellii.KE909381.1                        C 0 I 3
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41950  6 +     42204 -----------AT-AAC-------A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 3 I 5
s Pteropus_alecto.KB030862.1                              22978120  8 +  28871421 ------ttgttat---t--------
i Pteropus_alecto.KB030862.1                             C 0 I 1
s Pygathrix_cinerea.k141_1153803                             18451 13 -     91421 TAT-ATTCAT-TT---T-------T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612574 13 +   7812017 TAT-ATTCAT-TT---T-------T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18481 13 -     72585 TAT-ATTCAT-TT---T-------T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6898  8 +     55207 ------ATAT-TT---T-------G
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 3
s Rhinopithecus_bieti.k119_217274                            10149 13 -     11128 TAT-ATTCAT-TT---T-------T
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239517 13 - 195417433 tat-attcat-tt---t-------t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675164 13 +   7961872 TAT-ATTCAT-TT---T-------T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89210  8 -     96226 ------TTGTTAT---T--------
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 1
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154524  8 -    313613 ------TTAT-AG---T-------A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 2
s Semnopithecus_entellus.k141_1672505                         3323 13 -     12572 TAT-ATTCAT-TT---T-------T
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30175 13 +     39453 TAT-ATTCAT-TT---T-------T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           10683 13 +     27826 TAT-ATTCAT-TT---T-------T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10224 13 -     19483 TAT-ATTCAT-TT---T-------T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3522 13 -     12762 TAT-ATTCAT-TT---T-------T
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3367 13 +     13763 TAT-ATTCAT-TT---T-------T
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sorex_araneus.JH798187.1                                13652351  8 -  18376816 ------ttat-at---t-------t
i Sorex_araneus.JH798187.1                               C 0 I 1
s Spermophilus_dauricus.KZ294078.1                         1955503  3 -   3870691 ------------t---a-------t
i Spermophilus_dauricus.KZ294078.1                       I 10 I 13
s Spilogale_gracilis.SpiGra_flattened_line_13525             32406  6 +     97271 -----------ataa-c-------a
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 3 I 5
s Suricata_suricatta.SurSur_flattened_line_6629              19681  5 -    196729 ------TCAT-A-------------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 5
s Sus_scrofa.CM000828.4                                    6812510  8 +  69701581 ------atat-tc---t-------a
i Sus_scrofa.CM000828.4                                  I 2 I 3
s Tadarida_brasiliensis.TadBra_scaffold_25820                12199  8 +     41958 ------TTAT-TT---T-------A
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 3
s Tarsius_lariang.k141_2201908                               27153 11 +     70052 TAT-ATGGAT-AT------------
i Tarsius_lariang.k141_2201908                           C 0 I 1
s Tarsius_wallacei.k141_254427                                1950 11 -     16117 TAT-ATGGAT-AT------------
i Tarsius_wallacei.k141_254427                           C 0 I 1
s Theropithecus_gelada.CM009954.1                        186431851 13 + 186847797 TAT-ACtcat-tt---t-------t
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106773  3 +    114563 ------------T---A-------T
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     82583  5 +    610378 ------CTAT-A-------------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 3
s Trachypithecus_auratus.k141_722599                         14264  8 -     20410 TAT-ATTCA----------------
i Trachypithecus_auratus.k141_722599                     C 0 I 2
s Trachypithecus_crepusculus.k141_582567                      3384 13 -     12674 TAT-ATTCAT-TT---T-------T
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14372  8 +     19930 TAT-ATTCA----------------
i Trachypithecus_cristatus.k141_580354                   C 0 I 2
s Trachypithecus_francoisi.k141_1412647                      10771 13 -     19997 TAT-ATTCAT-TT---T-------T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            50913 13 -     60166 TAT-ATTCAT-TT---T-------T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18375 13 -     27529 TAT-ATTCAT-TT---T-------T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                       9 13 +      9131 TAT-ATTCAT-TT---T-------T
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28241 13 +     32220 TAT-ATTCAT-TT---T-------T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942338 13 +   6242583 TAT-ATTCAT-TT---T-------T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11591 13 +     20839 TAT-ATTCAT-TT---T-------T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    1199  8 +     27266 ------ATAT-TT---T-------A
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 I 3
s Tupaia_chinensis.KB320699.1                              2157517 13 +   4065304 tag-atttat-tt---a-------t
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15739287  2 +  33153633 ----------------T-------A
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 3
s Uropsilus_gracilis.UroGra_scaffold_12083                   54636  8 -     77625 ------TTAT-AT---T-------A
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 3
s Ursus_maritimus.KK499267.1                               4851792  6 -   5085361 -----------ataa-c-------a
i Ursus_maritimus.KK499267.1                             I 3 I 5
s Vicugna_pacos.KN270157.1                                 5373335  8 -   5488506 ------atat-tc---a-------a
i Vicugna_pacos.KN270157.1                               C 0 I 3
s Vulpes_lagopus.VulLag_flattened_line_30954                 12182 10 -     43706 ------TTAT-AT-TAT-------A
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 1303
s Xerus_inauris.XerIna_scaffold_2302                          2499  3 +    224448 ------------T---A-------T
i Xerus_inauris.XerIna_scaffold_2302                     I 10 I 13
s Zapus_hudsonius.ZapHud_scaffold_11398                      16201  3 +     63895 ------------T---A-------T
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Trachypithecus_laotum.k141_907409                          11930  0 -     21137 C
e Trachypithecus_hatinhensis.k141_17719                         27  0 +      9229 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   7643  0 +      8208 C
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73921  0 +    116680 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_42075                     2181  3 -     30804 I
e Rhinolophus_sinicus.LVEH01000134.1                        368295  0 -   3329780 C
e Rattus_norvegicus.chr16                                 53571770 803 +  90668790 I
e Puma_concolor.QAVW01001104.1                            20275666  4 -  38429054 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odocoileus_virginianus.KZ100018.1                         145852 291 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190536  0 +    196477 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           8152 215 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Megaderma_lyra.MegLyr_scaffold_4542                        14651  0 -    207569 C
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23212  0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_101188                404  0 +      9903 C
e Hipposideros_armiger.JXIK01000431.1                       111834  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Felis_nigripes.FelNig_flattened_line_20823                 10899  4 -     36744 I
e Felis_catus_fca126.CM031415.1                           20197145  4 + 205367284 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 34877  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64769  0 +   2246927 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Crocidura_indochinensis.CroInd_scaffold_37019               4143  0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           1799  0 +     23735 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1750  0 -      8501 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                       101968  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18363086  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18350823  0 -  23392119 C
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Acinonyx_jubatus.LLWD01001279.1                           828659  4 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      10117 1 +     62944 A
s Acinonyx_jubatus.LLWD01001279.1                           828663 1 -   1699592 a
i Acinonyx_jubatus.LLWD01001279.1                        I 4 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     72635 1 +     87051 A
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9512000 1 -  29979442 a
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 5 I 1
s Ailurus_fulgens.LNAC01001112.1                             81080 1 -    347723 a
i Ailurus_fulgens.LNAC01001112.1                         I 5 I 1
s Allactaga_bullata.AllBul_scaffold_9566                     75735 1 -     89534 A
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   17980 1 -     52922 A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         17917 1 -     28001 A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8412 1 -     18505 A
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9265 1 -     12518 A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              9728 1 +     51355 A
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                2833 1 -     36483 A
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13288 1 +     28687 A
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 1758 1 +     27940 A
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            2837 1 -      9457 A
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             1795 1 +     30492 A
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              5788 1 +     47717 A
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              2525 1 +      5663 A
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             16977 1 +     50774 A
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          677119 1 -   2318259 g
i Ammotragus_lervia.NIVO01071767.1                       I 3 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      186750 1 +    412891 A
i Anoura_caudifer.AnoCau_scaffold_1412                   I 3 I 2
s Antilocapra_americana.AntAmePen_scaffold_12469             99596 1 -    100397 G
i Antilocapra_americana.AntAmePen_scaffold_12469         I 3 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      14030 1 +     20879 A
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 14 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6156 1 +     43469 A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 3 I 2
s Ateles_geoffroyi_b.tarseq_1536                             21209989 1 -  21539123 A
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               44785 1 -     48001 A
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 27589 1 -     30947 A
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9361 1 -     89868 A
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              13745 1 -     40414 A
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                21634 1 +     72325 A
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193156 1 +  23207421 g
i Balaenoptera_acutorostrata.KI537508.1                  I 3 C 0
s Balaenoptera_bonaerensis.DF707048.1                         3621 1 -     18090 g
i Balaenoptera_bonaerensis.DF707048.1                    I 3 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    28206 1 +     34529 G
i Beatragus_hunteri.BeaHun_scaffold_50177                I 3 C 0
s Bison_bison.KN261452.1                                    201762 1 -    288883 T
i Bison_bison.KN261452.1                                 I 3 C 0
s Bos_indicus.CM003047.1                                  20274945 1 +  48749331 T
i Bos_indicus.CM003047.1                                 I 3 C 0
s Bos_mutus.JH880303.1                                     1127497 1 -   1948126 t
i Bos_mutus.JH880303.1                                   I 3 C 0
s Bos_taurus.CM000203.6                                   18085583 1 +  45695690 T
i Bos_taurus.CM000203.6                                  I 3 C 0
s Bubalus_bubalis.KI419123.1                               2821541 1 +   4408762 g
i Bubalus_bubalis.KI419123.1                             I 7 C 0
s Cacajao_ayresi.k141_552049                                102611 1 -    122966 A
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   62116 1 +     81800 A
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31296 1 -     95584 A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55397 1 -    119600 A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s CanFam4.chr16                                           17801877 1 -  60362399 a
i CanFam4.chr16                                          I 5 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     2618 1 -     43241 a
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 5 I 1
s Canis_lupus_dingo.QKWQ01000480.1                         9037320 1 -   9314153 a
i Canis_lupus_dingo.QKWQ01000480.1                       I 5 I 1
s Canis_lupus_familiaris.chr16                            17961789 1 -  59632846 a
i Canis_lupus_familiaris.chr16                           I 5 I 1
s Canis_lupus_orion.HG994398.1                            18503091 1 +  63665305 a
i Canis_lupus_orion.HG994398.1                           I 5 I 1
s Capra_aegagrus.CM003241.1                               18831230 1 +  46296322 g
i Capra_aegagrus.CM003241.1                              I 3 C 0
s Capra_hircus.CM004588.1                                 18061950 1 -  44709034 g
i Capra_hircus.CM004588.1                                I 3 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    2326 1 -     12242 T
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           156672 1 -    496798 a
i Carlito_syrichta.NW_007259797.1                        I 1 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6498 1 -     11696 A
i Carollia_perspicillata.CarPer_scaffold_92756           I 4 I 2
s Catagonus_wagneri.CatWag_scaffold_2839                     94956 1 +    217609 C
i Catagonus_wagneri.CatWag_scaffold_2839                 I 2 C 0
s Cephalopachus_bancanus.k141_1423433                         6170 1 +     31688 A
i Cephalopachus_bancanus.k141_1423433                    I 1 C 0
s Cercocebus_atys.KQ010504.1                               4478943 1 +   4669795 a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3437 1 +     17872 A
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4032 1 -     14043 A
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12127 1 +     27781 A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12277 1 -     20310 A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15257 1 +     29689 A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10013 1 -     20078 A
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          17928 1 -     27936 A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            6795 1 -     17152 A
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826527 1 +  39242232 A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226031 1 -  21565898 A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43150 1 -     53127 A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3400 1 +     13442 A
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       17946 1 -     27947 A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                          975 1 +     10558 A
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          3980 1 +     14005 A
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1217 1 -     17098 A
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1093 1 +     17877 A
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            158660 1 -    216457 A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63135 1 +     76511 A
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254256 1 +   2543920 t
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_israelita.k141_747660                           99740 1 +    146308 A
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          31548 1 -     50570 A
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18431850 1 -  18827391 A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18347 1 -     50209 A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425351 1 + 135778131 a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1913852 1 +   2368649 a
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952100 1 + 200372422 A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40377 1 +     84244 A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549394 1 -  53390261 a
i Condylura_cristata.JH655891.1                          I 5 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 51891 1 +     63868 A
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29857 1 -     87169 A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 5 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37286 1 +     51376 T
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16812789 1 +  35494412 g
i Delphinapterus_leucas.KZ290073.1                       I 3 C 0
s Desmodus_rotundus.KZ672289.1                             8631496 1 +  20541912 A
i Desmodus_rotundus.KZ672289.1                           I 3 I 2
s Dinomys_branickii.DinBra_scaffold_21862                    37744 1 +     67921 T
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       312278 1 +    607251 g
i Elaphurus_davidianus.JRFZ01104969.1                    I 3 C 0
s Ellobius_lutescens.LOEQ01008920.1                          22400 1 -    110024 a
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                            2320 1 +      8657 a
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16331047 1 -  41312741 a
i Enhydra_lutris.KZ291758.1                              I 5 I 1
s Erythrocebus_patas.Contig38                             21208523 1 -  21539334 A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12468 1 +    133382 G
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 3 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             26421 1 -     44125 G
i Eubalaena_japonica.EubJap_flattened_line_31514         I 3 C 0
s Felis_catus.CM001381.2                                  20238306 1 + 206538554 a
i Felis_catus.CM001381.2                                 I 4 C 0
s Felis_catus_fca126.CM031415.1                           20197149 1 + 205367284 a
i Felis_catus_fca126.CM031415.1                          I 4 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 10903 1 -     36744 A
i Felis_nigripes.FelNig_flattened_line_20823             I 4 C 0
s Fukomys_damarensis.KN121974.1                             851766 1 +   3816255 t
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               3721 1 -      9135 A
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     610237 1 -    660261 g
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 3 C 0
s Glis_glis.GliGli_scaffold_19807                            32294 1 +     49224 A
i Glis_glis.GliGli_scaffold_19807                        I 2 C 0
s Gorilla_beringei.k141_3596273                              19362 1 -     32273 A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341498 1 + 186649187 a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33973 1 +     78134 A
i Graphiurus_murinus.GraMur_scaffold_10447               I 2 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243695 1 +    327341 A
i Helogale_parvula.HelPar_flattened_line_2585            I 5 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 19439 1 +     36099 G
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 3 C 0
s Heterocephalus_glaber.JH602082.1                        20663554 1 +  22651954 t
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hoolock_leuconedys.ctg274                                    438156 1 +    630532 A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46400 1 +     55795 A
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 5 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84445 1 +    135385 T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7522373 1 -   7955117 a
i Ictidomys_tridecemlineatus.JH393364.1                  I 13 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                  21 1 -     31341 G
i Inia_geoffrensis.IniGeo_flattened_line_34779           I 3 C 0
s Lagothrix_lagothricha.k141_1005387                         15793 1 -     38430 A
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3044482 1 +   3914936 a
i Leptonychotes_weddellii.KB714746.1                     I 5 I 1
s Lepus_americanus.LepAme_scaffold_107385                     8159 1 -     14121 a
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 136
s Lipotes_vexillifer.KE559953.1                             269059 1 -    662738 g
i Lipotes_vexillifer.KE559953.1                          I 3 C 0
s Lophocebus_aterrimus.ctg367                              1440485 1 +   1826925 A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17958029 1 -  59628241 a
i Lycaon_pictus.CM007581.1                               I 5 I 1
s Macaca_arctoides.k141_2326796                              10295 1 +     40492 A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679549 1 +  60120075 A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16066 1 -     26193 A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            83842 1 -    114318 a
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9533 1 -     23192 A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                18997 1 -     29190 A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27575 1 +     37952 A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842652 1 + 187317192 a
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461230 1 -  25927173 a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83431 1 +     89720 A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10424 1 +     20474 A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10221 1 -     14993 A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333083 1 -    668171 A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8533 1 -     24072 A
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29164 1 -     45290 A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92036 1 +     94391 G
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 1 I 4
s Mandrillus_leucophaeus.scaffold280                      23940752 1 -  24302211 A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354868 1 +    752769 a
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33104654 1 -  40650429 a
i Marmota_marmota.CZRN01000018.1                         I 12 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             11766 1 +     13704 A
i Mellivora_capensis.MelCap_flattened_line_69365         I 5 I 1
s Meriones_unguiculatus.MerUng_scaffold_7390                 34643 1 +    140813 A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12184100 1 -  29670104 a
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    4677 1 +     10310 G
i Mesoplodon_bidens.MesBid_scaffold_108144               I 3 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                17247 1 -     19307 A
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 3 I 2
s Microtus_ochrogaster.CM001695.1                         11262383 1 -  27267610 a
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1851655 1 +   8254450 a
i Miniopterus_natalensis.LDJU01000034.1                  I 3 I 2
s Miniopterus_schreibersii.MinSch_scaffold_18080             35335 1 +     64694 A
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 3 I 2
s Miopithecus_ogouensis.k141_534055                          12428 1 -     28506 A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         7350 1 -      8324 a
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 5 I 1
s Monodon_monoceros.MonMon_M_scaffold_103                    28172 1 -    437263 G
i Monodon_monoceros.MonMon_M_scaffold_103                I 3 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   2301 1 +     82753 G
i Moschus_moschiferus.MosMos_scaffold_13123              I 3 C 0
s Murina_feae.MurFea_scaffold_85699                           8367 1 +     14753 A
i Murina_feae.MurFea_scaffold_85699                      I 215 I 2
s Mus_caroli.LT608237.1                                   84363030 1 - 120012414 a
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87652531 1 - 129401213 A
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31357265 1 -  89631738 a
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90755020 1 - 130317789 a
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               303148 1 -  14710649 A
i Mustela_putorius.JH418006.1                            I 5 I 1
s Myocastor_coypus.MyoCoy_scaffold_10123                     72508 1 -     80779 T
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_davidii.KB100139.1                                1589412 1 -   6019432 a
i Myotis_davidii.KB100139.1                              I 319 I 2
s Myotis_lucifugus.GL429869.1                              3905510 1 -   4330536 a
i Myotis_lucifugus.GL429869.1                            I 318 I 2
s Myotis_myotis.MyoMyo_scaffold_281845                        1664 1 +      1835 A
i Myotis_myotis.MyoMyo_scaffold_281845                   I 319 I 2
s Nannospalax_galili.KL204047.1                            2036823 1 -   3037898 a
i Nannospalax_galili.KL204047.1                          I 4 C 0
s Nasalis_larvatus.k141_413338                               18478 1 +     21681 A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308943 1 +  31847680 a
i Neomonachus_schauinslandi.NINY01007730.1               I 5 I 1
s Neophocaena_asiaeorientalis.KZ687982.1                   5867136 1 +   7148211 G
i Neophocaena_asiaeorientalis.KZ687982.1                 I 3 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    759239 1 +    783361 A
i Noctilio_leporinus.NocLep_scaffold_251                 I 1 I 2
s Nyctereutes_procyonoides.CAJHUB010000658.1               9151961 1 -   9404916 a
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 1159 I 1
s Ochotona_princeps.JH802162.1                             1365587 1 +   3988456 a
i Ochotona_princeps.JH802162.1                           C 0 I 106
s Odobenus_rosmarus.KB229312.1                              508085 1 -   2017862 a
i Odobenus_rosmarus.KB229312.1                           I 5 I 1
s Okapia_johnstoni.LVCL01S0005463.1                          78153 1 -    150152 g
i Okapia_johnstoni.LVCL01S0005463.1                      I 3 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   27041 1 +     28053 A
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    82044 1 +    102263 A
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2783050 1 -  10937097 g
i Orcinus_orca.KB316932.1                                I 3 C 0
s Oryctolagus_cuniculus.CM000791.1                        67149060 1 + 174332312 a
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 135
s Otocyon_megalotis.JAEUCK010005147.1                       465385 1 -    559221 a
i Otocyon_megalotis.JAEUCK010005147.1                    I 1638 I 1
s Ovis_aries.CM001607.2                                   17587412 1 +  44047080 g
i Ovis_aries.CM001607.2                                  I 3 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      175404 1 -    191736 G
i Ovis_canadensis.OviCan_scaffold_2572                   I 3 C 0
s Pan_paniscus.KQ411613.1                                    47463 1 +     80009 a
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146332 1 + 189151597 a
i Pan_troglodytes.CM009242.2                             I 12 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152512 1 +    230217 A
i Panthera_onca.PanOnc_flattened_line_3271               I 4 C 0
s Panthera_pardus.KV860321.1                                265721 1 +  18783137 a
i Panthera_pardus.KV860321.1                             I 4 C 0
s Panthera_tigris.KE722367.1                               4722601 1 -   8748460 a
i Panthera_tigris.KE722367.1                             I 4 C 0
s Pantholops_hodgsonii.KE114653.1                          1266309 1 -   2937107 g
i Pantholops_hodgsonii.KE114653.1                        I 3 C 0
s Papio_anubis.CM001495.2                                183446558 1 + 183742232 a
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10208 1 +     20448 A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567016 1 +  20919399 a
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   8948 1 +     41871 A
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12241 1 +     27711 A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3240 1 -     11374 A
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14020 1 -     78924 A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 5 C 0
s Peromyscus_maniculatus.KI615324.1                       18196671 1 -  18517816 a
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     29481 1 -     29689 T
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              10093 1 +     63832 G
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 3 C 0
s Piliocolobus_badius.k141_1142974                            1555 1 +     68526 A
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        41701 1 +     89929 A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43115 1 +     51399 G
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299352 1 -  14605196 a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1476471                              5002 1 +     26961 A
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1147 1 +     23417 A
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                4994 1 +     29694 A
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          30020 1 +     52772 A
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           5016 1 +     26198 A
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3941564 1 +   4542175 A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            4980 1 -     23490 A
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9236 1 -     39866 A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18402 1 +     34906 A
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       22664 1 +     87950 A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23493 1 +     88961 A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9164 1 +     39403 A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          22945 1 -     87928 A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         29904 1 +     60166 A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30101 1 +     67232 A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          25574 1 +     90634 A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          22946 1 -     89403 A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189134474 1 + 189387572 a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9574083 1 +   9816681 a
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76655 1 -     81375 A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8472 1 +     19060 A
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            12284 1 -     21651 a
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            16530 1 -     21811 g
i Pteronotus_parnellii.KE909381.1                        I 3 I 2
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41961 1 +     42204 A
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 5 I 1
s Pteropus_alecto.KB030862.1                              22978129 1 +  28871421 a
i Pteropus_alecto.KB030862.1                             I 1 I 2
s Puma_concolor.QAVW01001104.1                            20275670 1 -  38429054 a
i Puma_concolor.QAVW01001104.1                           I 4 C 0
s Pygathrix_cinerea.k141_1153803                             18464 1 -     91421 A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612587 1 +   7812017 A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18494 1 -     72585 A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6909 1 +     55207 G
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 3 C 0
s Rhinopithecus_bieti.k119_217274                            10162 1 -     11128 A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239530 1 - 195417433 a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675177 1 +   7961872 A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89219 1 -     96226 A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 1 I 2
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154534 1 -    313613 A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 2 C 0
s Semnopithecus_entellus.k141_1672505                         3336 1 -     12572 A
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30188 1 +     39453 A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           10696 1 +     27826 A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10237 1 -     19483 A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3535 1 -     12762 A
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3380 1 +     13763 A
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1955519 1 -   3870691 a
i Spermophilus_dauricus.KZ294078.1                       I 13 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             32417 1 +     97271 a
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 5 I 1
s Sus_scrofa.CM000828.4                                    6812521 1 +  69701581 c
i Sus_scrofa.CM000828.4                                  I 3 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                12210 1 +     41958 T
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 3 I 2
s Tarsius_lariang.k141_2201908                               27165 1 +     70052 A
i Tarsius_lariang.k141_2201908                           I 1 C 0
s Tarsius_wallacei.k141_254427                                1962 1 -     16117 A
i Tarsius_wallacei.k141_254427                           I 1 C 0
s Theropithecus_gelada.CM009954.1                        186431864 1 + 186847797 a
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106776 1 +    114563 T
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     82591 1 +    610378 A
i Tonatia_saurophila.TonSau_scaffold_294                 I 3 I 2
s Trachypithecus_auratus.k141_722599                         14274 1 -     20410 A
i Trachypithecus_auratus.k141_722599                     I 2 C 0
s Trachypithecus_crepusculus.k141_582567                      3397 1 -     12674 A
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14382 1 +     19930 A
i Trachypithecus_cristatus.k141_580354                   I 2 C 0
s Trachypithecus_francoisi.k141_1412647                      10784 1 -     19997 A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            50926 1 -     60166 A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18388 1 -     27529 A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                      22 1 +      9131 A
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28254 1 +     32220 A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942351 1 +   6242583 A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11604 1 +     20839 A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    1210 1 +     27266 G
i Tragulus_javanicus.TraJav_scaffold_40725               I 3 C 0
s Tupaia_chinensis.KB320699.1                              2157530 1 +   4065304 a
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15739292 1 +  33153633 g
i Tursiops_truncatus.MRVK01000835.1                      I 3 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54647 1 -     77625 A
i Uropsilus_gracilis.UroGra_scaffold_12083               I 3 C 0
s Ursus_maritimus.KK499267.1                               4851803 1 -   5085361 a
i Ursus_maritimus.KK499267.1                             I 5 I 1
s Vulpes_lagopus.VulLag_flattened_line_30954                 13495 1 -     43706 a
i Vulpes_lagopus.VulLag_flattened_line_30954             I 1303 I 1
s Xerus_inauris.XerIna_scaffold_2302                          2515 1 +    224448 A
i Xerus_inauris.XerIna_scaffold_2302                     I 13 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      16204 1 +     63895 A
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202 0 +      8798 C
e Galago_senegalensis.k141_631886                             7400 0 +     11339 C
e Galago_moholi.ctg2040                                     429710 0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964 2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445 0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734 0 -     33856 C
e Perodicticus_potto.k141_1186926                              597 0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219 0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vicugna_pacos.KN270157.1                                 5373343 3 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Trachypithecus_laotum.k141_907409                          11930 0 -     21137 C
e Trachypithecus_hatinhensis.k141_17719                         27 0 +      9229 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   7643 0 +      8208 C
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73921 0 +    116680 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Suricata_suricatta.SurSur_flattened_line_6629              19686 5 -    196729 I
e Sorex_araneus.JH798187.1                                13652359 1 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_42075                     2181 3 -     30804 I
e Rhinolophus_sinicus.LVEH01000134.1                        368295 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53571770 803 +  90668790 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             3126 11 +     22620 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odocoileus_virginianus.KZ100018.1                         145852 291 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869 0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414 0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947 0 - 196305487 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190536 0 +    196477 C
e Myotis_brandtii.KE162005.1                                280096 2104 -  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398 7 +     37127 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 143042 4 -    366855 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Megaderma_lyra.MegLyr_scaffold_4542                        14651 0 -    207569 C
e Manis_pentadactyla.KN006162.1                              51623 129 -    317179 I
e Manis_javanica.JSZB01003497.1                              19605 129 +    737560 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Lasiurus_borealis.LasBor_scaffold_50988                    16509 518 +     29960 I
e Jaculus_jaculus.JH725527.1                               8278471 0 -   9596543 C
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23212 0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_101188                404 0 +      9903 C
e Hipposideros_armiger.JXIK01000431.1                       111834 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689 0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2147983 500 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 34877 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64769 0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_15900             1237 0 -     75252 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Crocidura_indochinensis.CroInd_scaffold_37019               4143 0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11668671 0 + 224834208 C
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           1799 0 +     23735 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1750 0 -      8501 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                       101968 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18363086 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18350823 0 -  23392119 C
e Castor_canadensis.CasCan_scaffold_2074                    138642 0 +    179628 C
e Camelus_ferus.KB017975.1                                  404592 3 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2336294 3 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10003822 3 -  17673402 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538 0 +      5281 C

a score=0.000000
s hg38.chrUn_KI270753v1                                      10118 1 +     62944 T
s Acinonyx_jubatus.LLWD01001279.1                           828664 1 -   1699592 a
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     72636 1 +     87051 T
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     75736 1 -     89534 T
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   17981 1 -     52922 T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         17918 1 -     28001 T
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8413 1 -     18505 T
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9266 1 -     12518 T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              9729 1 +     51355 T
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                2834 1 -     36483 T
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13289 1 +     28687 T
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 1759 1 +     27940 T
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            2838 1 -      9457 T
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             1796 1 +     30492 T
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              5789 1 +     47717 T
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              2526 1 +      5663 T
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             16978 1 +     50774 T
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          677120 1 -   2318259 a
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      186753 1 +    412891 A
i Anoura_caudifer.AnoCau_scaffold_1412                   I 2 I 11
s Antilocapra_americana.AntAmePen_scaffold_12469             99597 1 -    100397 A
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      14031 1 +     20879 C
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6159 1 +     43469 A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 2 I 11
s Ateles_geoffroyi_b.tarseq_1536                             21209990 1 -  21539123 T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               44786 1 -     48001 T
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 27590 1 -     30947 T
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9362 1 -     89868 T
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              13746 1 -     40414 T
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                21635 1 +     72325 T
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193157 1 +  23207421 a
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         3622 1 -     18090 a
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    28207 1 +     34529 A
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    201763 1 -    288883 A
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20274946 1 +  48749331 A
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1127498 1 -   1948126 a
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18085584 1 +  45695690 A
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2821542 1 +   4408762 a
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                102612 1 -    122966 T
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   62117 1 +     81800 T
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31297 1 -     95584 T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55398 1 -    119600 T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Capra_aegagrus.CM003241.1                               18831231 1 +  46296322 a
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18061951 1 -  44709034 a
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    2327 1 -     12242 T
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           156673 1 -    496798 t
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6501 1 -     11696 A
i Carollia_perspicillata.CarPer_scaffold_92756           I 2 I 11
s Castor_canadensis.CasCan_scaffold_2074                    138642 1 +    179628 T
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     94957 1 +    217609 A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         6171 1 +     31688 T
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4478944 1 +   4669795 c
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3438 1 +     17872 C
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4033 1 -     14043 C
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12128 1 +     27781 C
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12278 1 -     20310 T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15258 1 +     29689 T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10014 1 -     20078 T
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          17929 1 -     27936 T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            6796 1 -     17152 T
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826528 1 +  39242232 T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226032 1 -  21565898 T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43151 1 -     53127 T
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3401 1 +     13442 T
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       17947 1 -     27947 T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                          976 1 +     10558 T
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          3981 1 +     14005 T
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1218 1 -     17098 T
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1094 1 +     17877 T
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            158661 1 -    216457 T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63136 1 +     76511 T
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254257 1 +   2543920 t
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_israelita.k141_747660                           99741 1 +    146308 T
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          31549 1 -     50570 T
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18431851 1 -  18827391 T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18348 1 -     50209 T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425352 1 + 135778131 t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1913853 1 +   2368649 t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952101 1 + 200372422 T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40378 1 +     84244 T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549395 1 -  53390261 a
i Condylura_cristata.JH655891.1                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 51892 1 +     63868 T
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29858 1 -     87169 A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 4
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37287 1 +     51376 T
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16812790 1 +  35494412 a
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8631499 1 +  20541912 A
i Desmodus_rotundus.KZ672289.1                           I 2 I 11
s Dinomys_branickii.DinBra_scaffold_21862                    37745 1 +     67921 T
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       312279 1 +    607251 a
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          22401 1 -    110024 a
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                            2321 1 +      8657 a
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Erythrocebus_patas.Contig38                             21208524 1 -  21539334 T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12469 1 +    133382 A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             26422 1 -     44125 A
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20238307 1 + 206538554 a
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20197150 1 + 205367284 a
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 10904 1 -     36744 A
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             851767 1 +   3816255 g
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               3722 1 -      9135 T
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     610238 1 -    660261 a
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            32295 1 +     49224 T
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              19363 1 -     32273 T
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341499 1 + 186649187 t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33974 1 +     78134 T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243696 1 +    327341 A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 4
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 19440 1 +     36099 A
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20663555 1 +  22651954 g
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hoolock_leuconedys.ctg274                                    438157 1 +    630532 T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46401 1 +     55795 A
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 4
s Hystrix_cristata.HysCri_scaffold_5660                      84446 1 +    135385 T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7522374 1 -   7955117 t
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                  22 1 -     31341 A
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         15794 1 -     38430 T
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     8296 1 -     14121 T
i Lepus_americanus.LepAme_scaffold_107385                I 136 C 0
s Lipotes_vexillifer.KE559953.1                             269060 1 -    662738 a
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1440486 1 +   1826925 C
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                              10296 1 +     40492 C
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679550 1 +  60120075 C
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16067 1 -     26193 C
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            83843 1 -    114318 c
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9534 1 -     23192 C
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                18998 1 -     29190 C
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27576 1 +     37952 C
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842653 1 + 187317192 c
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461231 1 -  25927173 c
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83432 1 +     89720 C
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10425 1 +     20474 C
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10222 1 -     14993 C
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333084 1 -    668171 C
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8534 1 -     24072 C
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29165 1 -     45290 C
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92041 1 +     94391 A
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 4 I 11
s Mandrillus_leucophaeus.scaffold280                      23940753 1 -  24302211 C
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354869 1 +    752769 c
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33104655 1 -  40650429 t
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 34644 1 +    140813 T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12184101 1 -  29670104 t
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    4678 1 +     10310 A
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                17250 1 -     19307 A
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 2 I 11
s Microtus_ochrogaster.CM001695.1                         11262384 1 -  27267610 a
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1851658 1 +   8254450 a
i Miniopterus_natalensis.LDJU01000034.1                  I 2 I 11
s Miniopterus_schreibersii.MinSch_scaffold_18080             35338 1 +     64694 A
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 2 I 11
s Miopithecus_ogouensis.k141_534055                          12429 1 -     28506 T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    28173 1 -    437263 A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 143046 1 -    366855 A
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 4 I 11
s Moschus_moschiferus.MosMos_scaffold_13123                   2302 1 +     82753 A
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           8370 1 +     14753 A
i Murina_feae.MurFea_scaffold_85699                      I 2 I 11
s Mus_caroli.LT608237.1                                   84363031 1 - 120012414 t
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87652532 1 - 129401213 T
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31357266 1 -  89631738 t
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90755021 1 - 130317789 t
i Mus_spretus.CM004101.1                                 C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     72509 1 -     80779 T
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_davidii.KB100139.1                                1589415 1 -   6019432 a
i Myotis_davidii.KB100139.1                              I 2 I 11
s Myotis_lucifugus.GL429869.1                              3905513 1 -   4330536 a
i Myotis_lucifugus.GL429869.1                            I 2 I 11
s Myotis_myotis.MyoMyo_scaffold_281845                        1667 1 +      1835 A
i Myotis_myotis.MyoMyo_scaffold_281845                   I 2 I 11
s Nannospalax_galili.KL204047.1                            2036824 1 -   3037898 t
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               18479 1 +     21681 T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5867137 1 +   7148211 A
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    759242 1 +    783361 G
i Noctilio_leporinus.NocLep_scaffold_251                 I 2 I 11
s Ochotona_princeps.JH802162.1                             1365694 1 +   3988456 t
i Ochotona_princeps.JH802162.1                           I 106 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          78154 1 -    150152 a
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   27042 1 +     28053 A
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    82045 1 +    102263 T
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2783051 1 -  10937097 a
i Orcinus_orca.KB316932.1                                C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67149196 1 + 174332312 t
i Oryctolagus_cuniculus.CM000791.1                       I 135 C 0
s Ovis_aries.CM001607.2                                   17587413 1 +  44047080 a
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      175405 1 -    191736 A
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    47464 1 +     80009 t
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146333 1 + 189151597 t
i Pan_troglodytes.CM009242.2                             C 0 I 7
s Panthera_onca.PanOnc_flattened_line_3271                  152513 1 +    230217 A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                265722 1 +  18783137 a
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4722602 1 -   8748460 a
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1266310 1 -   2937107 a
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183446559 1 + 183742232 c
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10209 1 +     20448 C
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567017 1 +  20919399 c
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   8949 1 +     41871 C
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12242 1 +     27711 C
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3241 1 -     11374 C
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14021 1 -     78924 A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 4
s Peromyscus_maniculatus.KI615324.1                       18196672 1 -  18517816 t
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     29482 1 -     29689 A
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              10094 1 +     63832 A
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            1556 1 +     68526 T
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        41702 1 +     89929 T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43116 1 +     51399 T
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299353 1 -  14605196 t
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1476471                              5003 1 +     26961 T
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1148 1 +     23417 T
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                4995 1 +     29694 T
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          30021 1 +     52772 T
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           5017 1 +     26198 T
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3941565 1 +   4542175 T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            4981 1 -     23490 T
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9237 1 -     39866 T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18403 1 +     34906 C
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       22665 1 +     87950 T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23494 1 +     88961 T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9165 1 +     39403 T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          22946 1 -     87928 T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         29905 1 +     60166 T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30102 1 +     67232 T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          25575 1 +     90634 T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          22947 1 -     89403 T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189134475 1 + 189387572 t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9574084 1 +   9816681 t
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76656 1 -     81375 T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8473 1 +     19060 T
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            12285 1 -     21651 t
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            16533 1 -     21811 a
i Pteronotus_parnellii.KE909381.1                        I 2 I 11
s Pteropus_alecto.KB030862.1                              22978132 1 +  28871421 a
i Pteropus_alecto.KB030862.1                             I 2 I 11
s Puma_concolor.QAVW01001104.1                            20275671 1 -  38429054 a
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             18465 1 -     91421 T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612588 1 +   7812017 T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18495 1 -     72585 T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6910 1 +     55207 A
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinopithecus_bieti.k119_217274                            10163 1 -     11128 T
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239531 1 - 195417433 t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675178 1 +   7961872 T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89222 1 -     96226 A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 2 I 11
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154535 1 -    313613 T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                         3337 1 -     12572 T
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30189 1 +     39453 T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           10697 1 +     27826 T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10238 1 -     19483 T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3536 1 -     12762 T
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3381 1 +     13763 T
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sorex_araneus.JH798187.1                                13652360 1 -  18376816 t
i Sorex_araneus.JH798187.1                               I 1 C 0
s Spermophilus_dauricus.KZ294078.1                         1955520 1 -   3870691 t
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              19691 1 -    196729 A
i Suricata_suricatta.SurSur_flattened_line_6629          I 5 I 4
s Sus_scrofa.CM000828.4                                    6812522 1 +  69701581 a
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                12213 1 +     41958 g
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 2 I 367
s Tarsius_lariang.k141_2201908                               27166 1 +     70052 T
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1963 1 -     16117 T
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186431865 1 + 186847797 c
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106777 1 +    114563 A
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     82594 1 +    610378 A
i Tonatia_saurophila.TonSau_scaffold_294                 I 2 I 11
s Trachypithecus_auratus.k141_722599                         14275 1 -     20410 T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3398 1 -     12674 T
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14383 1 +     19930 T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      10785 1 -     19997 T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            50927 1 -     60166 T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18389 1 -     27529 T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                      23 1 +      9131 T
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28255 1 +     32220 T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942352 1 +   6242583 T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11605 1 +     20839 T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    1211 1 +     27266 A
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tupaia_chinensis.KB320699.1                              2157531 1 +   4065304 t
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15739293 1 +  33153633 a
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          2516 1 +    224448 C
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      16205 1 +     63895 A
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202 0 +      8798 C
e Galago_senegalensis.k141_631886                             7400 0 +     11339 C
e Galago_moholi.ctg2040                                     429710 0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964 2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445 0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734 0 -     33856 C
e Perodicticus_potto.k141_1186926                              597 0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219 0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 13496 1 -     43706 I
e Vicugna_pacos.KN270157.1                                 5373343 3 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851804 1 -   5085361 I
e Uropsilus_gracilis.UroGra_scaffold_12083                   54648 0 -     77625 C
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Trachypithecus_laotum.k141_907409                          11930 0 -     21137 C
e Trachypithecus_hatinhensis.k141_17719                         27 0 +      9229 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   7643 0 +      8208 C
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73921 0 +    116680 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             32418 1 +     97271 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_42075                     2181 3 -     30804 I
e Rhinolophus_sinicus.LVEH01000134.1                        368295 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53571770 803 +  90668790 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         41962 1 +     42204 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             3126 11 +     22620 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Otocyon_megalotis.JAEUCK010005147.1                       465386 1 -    559221 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odocoileus_virginianus.KZ100018.1                         145852 291 +    630418 I
e Odobenus_rosmarus.KB229312.1                              508086 1 -   2017862 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869 0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414 0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947 0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9151962 1 -   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                20308944 1 +  31847680 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190536 0 +    196477 C
e Myotis_brandtii.KE162005.1                                280096 2104 -  10118263 I
e Mustela_putorius.JH418006.1                               303149 1 -  14710649 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398 7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7351 1 -      8324 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mellivora_capensis.MelCap_flattened_line_69365             11767 1 +     13704 I
e Megaderma_lyra.MegLyr_scaffold_4542                        14651 0 -    207569 C
e Manis_pentadactyla.KN006162.1                              51623 129 -    317179 I
e Manis_javanica.JSZB01003497.1                              19605 129 +    737560 I
e Lycaon_pictus.CM007581.1                                17958030 1 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Leptonychotes_weddellii.KB714746.1                       3044483 1 +   3914936 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Lasiurus_borealis.LasBor_scaffold_50988                    16509 518 +     29960 I
e Jaculus_jaculus.JH725527.1                               8278471 0 -   9596543 C
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23212 0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_101188                404 0 +      9903 C
e Hipposideros_armiger.JXIK01000431.1                       111834 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689 0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2147983 500 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16331048 1 -  41312741 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 34877 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64769 0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_15900             1237 0 -     75252 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Crocidura_indochinensis.CroInd_scaffold_37019               4143 0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11668671 0 + 224834208 C
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           1799 0 +     23735 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1750 0 -      8501 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                       101968 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18363086 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18350823 0 -  23392119 C
e Canis_lupus_orion.HG994398.1                            18503092 1 +  63665305 I
e Canis_lupus_familiaris.chr16                            17961790 1 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9037321 1 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     2619 1 -     43241 I
e CanFam4.chr16                                           17801878 1 -  60362399 I
e Camelus_ferus.KB017975.1                                  404592 3 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2336294 3 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10003822 3 -  17673402 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538 0 +      5281 C
e Ailurus_fulgens.LNAC01001112.1                             81081 1 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512001 1 -  29979442 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      10119  5 +     62944 T-T----------T---------AT
s Acinonyx_jubatus.LLWD01001279.1                           828665 12 -   1699592 t-att--ta-tatt---------tt
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     72637  5 +     87051 A-T----------T---------TT
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9512002 14 -  29979442 t-tt-cacaatatc---------at
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 1 C 0
s Ailurus_fulgens.LNAC01001112.1                             81082 15 -    347723 a-tttcataatatt---------aa
i Ailurus_fulgens.LNAC01001112.1                         I 1 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     75737  5 -     89534 G-T----------T---------TT
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   17982  5 -     52922 T-T----------T---------AC
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         17919  5 -     28001 T-T----------T---------ac
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8414  5 -     18505 T-T----------T---------ac
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9267  5 -     12518 T-T----------T---------AC
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              9730  5 +     51355 T-T----------T---------ac
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                2835  5 -     36483 T-T----------T---------ac
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13290  5 +     28687 T-T----------T---------ac
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 1760  5 +     27940 T-T----------T---------ac
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            2839  5 -      9457 T-T----------T---------ac
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             1797  5 +     30492 T-T----------T---------ac
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              5790  5 +     47717 T-T----------T---------ac
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              2527  5 +      5663 T-T----------T---------ac
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             16979  5 +     50774 T-T----------T---------ac
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          677121  5 -   2318259 t-g----------c---------at
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      186765  6 +    412891 G-G----------T--------TTC
i Anoura_caudifer.AnoCau_scaffold_1412                   I 11 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             99598  5 -    100397 T-A----------C---------AT
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      14032  5 +     20879 A-T----------T---------GT
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6171  6 +     43469 G-T----------T--------TTT
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 11 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21209991  5 -  21539123 T-T----------T---------ac
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               44787  5 -     48001 T-T----------T---------ac
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 27591  5 -     30947 T-T----------T---------AC
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9363  5 -     89868 T-T----------T---------ac
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              13747  5 -     40414 T-T----------T---------AC
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                21636  5 +     72325 T-T----------T---------at
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193158  5 +  23207421 t-a----------g---------at
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         3623  5 -     18090 t-a----------g---------at
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    28208  5 +     34529 T-A----------C---------AT
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    201764  5 -    288883 T-A----------A---------CT
i Bison_bison.KN261452.1                                 C 0 I 3
s Bos_indicus.CM003047.1                                  20274947  5 +  48749331 T-A----------A---------CT
i Bos_indicus.CM003047.1                                 C 0 I 3
s Bos_mutus.JH880303.1                                     1127499  5 -   1948126 t-a----------a---------CT
i Bos_mutus.JH880303.1                                   C 0 I 3
s Bos_taurus.CM000203.6                                   18085585  5 +  45695690 T-A----------A---------CT
i Bos_taurus.CM000203.6                                  C 0 I 3
s Bubalus_bubalis.KI419123.1                               2821543  5 +   4408762 t-a----------c---------at
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                102613  5 -    122966 T-T----------T---------AC
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   62118  5 +     81800 T-T----------T---------AC
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31298  5 -     95584 T-T----------T---------AC
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55399  5 -    119600 T-T----------T---------ac
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10003825  3 -  17673402 -------------g---------TT
i Camelus_bactrianus.KN276810.1                          I 3 C 0
s Camelus_dromedarius.KN272107.1                           2336297  3 -   7040546 -------------g---------TT
i Camelus_dromedarius.KN272107.1                         I 3 C 0
s Camelus_ferus.KB017975.1                                  404595  3 -   1652518 -------------g---------TT
i Camelus_ferus.KB017975.1                               I 3 C 0
s CanFam4.chr16                                           17801879 15 -  60362399 t-atttacaatatc---------at
i CanFam4.chr16                                          I 1 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     2620 15 -     43241 t-ttttacaatatc---------at
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 1 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9037322 15 -   9314153 t-ttttacaatatc---------at
i Canis_lupus_dingo.QKWQ01000480.1                       I 1 C 0
s Canis_lupus_familiaris.chr16                            17961791 15 -  59632846 t-ttttacaatatc---------at
i Canis_lupus_familiaris.chr16                           I 1 C 0
s Canis_lupus_orion.HG994398.1                            18503093 15 +  63665305 t-atttacaatatc---------at
i Canis_lupus_orion.HG994398.1                           I 1 C 0
s Capra_aegagrus.CM003241.1                               18831232  5 +  46296322 t-a----------c---------at
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18061952  5 -  44709034 t-a----------c---------at
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    2328  5 -     12242 A-T----------A---------TT
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           156674  5 -    496798 a-t----------t---------ac
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6513  6 -     11696 G-T----------T--------TTT
i Carollia_perspicillata.CarPer_scaffold_92756           I 11 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138643  5 +    179628 A-T----------C---------TA
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     94958  5 +    217609 T-A----------G---------CT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 524
s Cephalopachus_bancanus.k141_1423433                         6172  5 +     31688 A-T----------T---------AC
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4478945  5 +   4669795 t-t----------t---------ac
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3439  5 +     17872 T-T----------T---------AC
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4034  5 -     14043 T-T----------T---------AC
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12129  5 +     27781 T-T----------T---------AC
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12279  5 -     20310 T-T----------T---------AC
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15259  5 +     29689 T-T----------T---------AC
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10015  5 -     20078 T-T----------T---------AC
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          17930  5 -     27936 T-T----------T---------AC
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            6797  5 -     17152 T-T----------T---------AC
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826529  5 +  39242232 T-T----------T---------AC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226033  5 -  21565898 T-T----------T---------AC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43152  5 -     53127 T-T----------T---------AC
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3402  5 +     13442 T-T----------T---------AC
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       17948  5 -     27947 T-T----------T---------AC
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                          977  5 +     10558 T-T----------T---------AC
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          3982  5 +     14005 T-T----------T---------AC
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1219  5 -     17098 T-T----------T---------AC
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1095  5 +     17877 T-T----------T---------AC
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            158662  5 -    216457 T-T----------T---------AC
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63137  5 +     76511 T-T----------T---------AC
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254258  5 +   2543920 a-t----------a---------tt
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_israelita.k141_747660                           99742  5 +    146308 T-T----------T---------AC
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          31550  5 -     50570 T-T----------T---------AC
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18431852  5 -  18827391 T-T----------T---------AC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18349  5 -     50209 T-T----------T---------AC
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425353  5 + 135778131 t-t----------t---------ac
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1913854  5 +   2368649 t-t----------t---------ac
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952102  5 + 200372422 T-T----------T---------AC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40379  5 +     84244 T-T----------T---------AC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549396  5 -  53390261 a-t----------t---------tc
i Condylura_cristata.JH655891.1                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 51893  5 +     63868 A-T----------T---------TT
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               4143  1 -     19598 ------------------------T
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29863 12 -     87169 T-A---TTTATATT---------TT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 4 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37288  5 +     51376 A-T----------A---------TT
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16812791  5 +  35494412 t-a----------g---------at
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8631511  6 +  20541912 g-t----------tt--------tt
i Desmodus_rotundus.KZ672289.1                           I 11 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37746  5 +     67921 A-T----------G---------TT
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       312280  5 +    607251 t-a----------c---------at
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          22402  5 -    110024 a-a----------t---------tt
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                            2322  5 +      8657 g-a----------t---------tt
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16331049 15 -  41312741 a-tctcacaatatc---------at
i Enhydra_lutris.KZ291758.1                              I 1 C 0
s Erythrocebus_patas.Contig38                             21208525  5 -  21539334 T-T----------T---------AC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12470  5 +    133382 T-A----------G---------AT
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             26423  5 -     44125 T-A----------G---------AT
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20238308 12 + 206538554 t-att--ta-tatt---------tt
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20197151 12 + 205367284 t-att--ta-tatt---------tt
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 10905 12 -     36744 T-A---TTTATATT---------TT
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             851768  5 +   3816255 a-t----------a---------tt
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               3723  8 -      9135 T-T-------GTAT---------AT
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     610239  5 -    660261 t-a----------c---------at
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            32296  3 +     49224 A-T----------T-----------
i Glis_glis.GliGli_scaffold_19807                        C 0 I 2
s Gorilla_beringei.k141_3596273                              19364  5 -     32273 T-T----------T---------AT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341500  5 + 186649187 t-t----------t---------at
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33975  5 +     78134 A-T----------T---------TT
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243701 12 +    327341 T-A---TTTATATT---------TT
i Helogale_parvula.HelPar_flattened_line_2585            I 4 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 19441  5 +     36099 T-A----------C---------AT
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20663556  5 +  22651954 a-t----------a---------tt
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hoolock_leuconedys.ctg274                                    438158  5 +    630532 T-T----------T---------AT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46406 12 +     55795 T-A---TTTATATT---------TT
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 4 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84447  5 +    135385 A-T----------A---------TT
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7522375  5 -   7955117 a-c----------t---------tt
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                  23  5 -     31341 T-A----------G---------AT
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8278471  5 -   9596543 g-t----------t---------tt
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                    0  2 -     18011 -----------------------AT
i Kogia_breviceps.KogBre_flattened_line_81059            N 0 C 0
s Lagothrix_lagothricha.k141_1005387                         15795  5 -     38430 T-T----------T---------AC
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    17757  6 -     42476 A-t----------tt--------tc
i Lasiurus_borealis.LasBor_scaffold_32767                I 15 C 0
s Leptonychotes_weddellii.KB714746.1                       3044484 15 +   3914936 t-tttcacaatatc---------at
i Leptonychotes_weddellii.KB714746.1                     I 1 C 0
s Lepus_americanus.LepAme_scaffold_107385                     8297  5 -     14121 C-T----------T---------AC
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             269061  5 -    662738 t-a----------g---------at
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1440487  5 +   1826925 T-T----------T---------AC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17958031 15 -  59628241 t-ttttacaatatc---------at
i Lycaon_pictus.CM007581.1                               I 1 C 0
s Macaca_arctoides.k141_2326796                              10297  5 +     40492 T-T----------T---------AC
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679551  5 +  60120075 T-T----------T---------AC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16068  5 -     26193 T-T----------T---------AC
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            83844  5 -    114318 t-t----------t---------ac
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9535  5 -     23192 T-T----------T---------AC
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                18999  5 -     29190 T-T----------T---------AC
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27577  5 +     37952 T-T----------T---------AC
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842654  5 + 187317192 t-t----------t---------ac
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461232  5 -  25927173 t-t----------t---------ac
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83433  5 +     89720 T-T----------T---------AC
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10426  5 +     20474 T-T----------T---------AC
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10223  5 -     14993 T-T----------T---------AC
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333085  5 -    668171 T-T----------T---------AC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8535  5 -     24072 T-T----------T---------AC
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29166  5 -     45290 T-T----------T---------AC
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92053  5 +     94391 A-T----------T---------TT
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 11 C 0
s Mandrillus_leucophaeus.scaffold280                      23940754  5 -  24302211 T-T----------T---------AC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354870  5 +    752769 t-t----------t---------ac
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33104656  5 -  40650429 a-t----------t---------tt
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             11768 15 +     13704 A-TCTCACAATATC---------AT
i Mellivora_capensis.MelCap_flattened_line_69365         I 1 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 34645  5 +    140813 A-T----------T---------TT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12184102  5 -  29670104 a-a----------t---------tt
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    4679  5 +     10310 T-A----------G---------AT
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                17262  6 -     19307 G-T----------T--------TTT
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 11 C 0
s Microtus_ochrogaster.CM001695.1                         11262385  5 -  27267610 a-a----------t---------tt
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1851670  6 +   8254450 a-t----------t--------ctt
i Miniopterus_natalensis.LDJU01000034.1                  I 11 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             35350  6 +     64694 A-T----------T--------CTT
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 11 C 0
s Miopithecus_ogouensis.k141_534055                          12430  5 -     28506 T-T----------T---------AC
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         7352 15 -      8324 t-tttcacaatatc---------at
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 1 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    28174  5 -    437263 T-A----------G---------AT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 143058  6 -    366855 A-T----------T--------TTT
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 11 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   2303  5 +     82753 T-A----------C---------AT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           8382  6 +     14753 A-T----------T--------TTT
i Murina_feae.MurFea_scaffold_85699                      I 11 C 0
s Mus_caroli.LT608237.1                                   84363032  5 - 120012414 a-t----------t---------tt
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87652533  5 - 129401213 A-T----------T---------TT
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31357267  5 -  89631738 a-t----------t---------tt
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90755022  5 - 130317789 a-t----------t---------tt
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               303150 15 -  14710649 A-TCTCACACTAAC---------AT
i Mustela_putorius.JH418006.1                            I 1 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     72510  5 -     80779 A-T----------A---------TT
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_davidii.KB100139.1                                1589427 14 -   6019432 a-t----------ttttatattttt
i Myotis_davidii.KB100139.1                              I 11 C 0
s Myotis_lucifugus.GL429869.1                              3905525  6 -   4330536 a-t----------tt--------tt
i Myotis_lucifugus.GL429869.1                            I 11 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                        1679  6 +      1835 a-t----------tt--------tt
i Myotis_myotis.MyoMyo_scaffold_281845                   I 11 C 0
s Nannospalax_galili.KL204047.1                            2036825  5 -   3037898 a-t----------t---------tt
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               18480  5 +     21681 T-T----------T---------AC
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308945 15 +  31847680 t-tttcacaatatc---------at
i Neomonachus_schauinslandi.NINY01007730.1               I 1 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5867138  5 +   7148211 t-a----------g---------at
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    759254  5 +    783361 A-T----------T---------TT
i Noctilio_leporinus.NocLep_scaffold_251                 I 11 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9151963 15 -   9404916 t-ttttacaatatc---------at
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 1 T 1159
s Ochotona_princeps.JH802162.1                             1365695  6 +   3988456 cca----------t---------ac
i Ochotona_princeps.JH802162.1                           C 0 I 4
s Odobenus_rosmarus.KB229312.1                              508087 15 -   2017862 t-tttcacaatatc---------at
i Odobenus_rosmarus.KB229312.1                           I 1 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          78155  5 -    150152 t-a----------c---------at
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   27043  5 +     28053 A-A----------T---------TT
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    82046  5 +    102263 A-C----------T---------TT
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2783052  5 -  10937097 t-a----------g---------at
i Orcinus_orca.KB316932.1                                C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67149197  5 + 174332312 c-t----------t---------ac
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       465387 15 -    559221 t-ttttacaatatc---------at
i Otocyon_megalotis.JAEUCK010005147.1                    I 1 T 1638
s Ovis_aries.CM001607.2                                   17587414  5 +  44047080 t-a----------c---------at
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      175406  5 -    191736 T-A----------C---------AT
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    47465  5 +     80009 t-t----------t---------at
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.KZ622849.1                                 25654  5 +    110857 t-t----------t---------at
i Pan_troglodytes.KZ622849.1                             I 2 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152514 12 +    230217 T-A---TTTATATT---------TT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                265723 12 +  18783137 t-att--ta-tatt---------tt
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4722603 12 -   8748460 t-att--ta-tatt---------tt
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1266311  5 -   2937107 t-a----------c---------at
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183446560  5 + 183742232 t-t----------t---------ac
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10210  5 +     20448 T-T----------T---------AC
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567018  5 +  20919399 t-t----------t---------ac
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   8950  5 +     41871 T-T----------T---------AC
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12243  5 +     27711 T-T----------T---------AC
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3242  5 -     11374 T-T----------T---------AC
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14026 11 -     78924 T-A---TTTATATT---------T-
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 4 C 0
s Peromyscus_maniculatus.KI615324.1                       18196673  5 -  18517816 a-a----------t---------tt
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     29483  5 -     29689 A-T----------A---------TT
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              10095  5 +     63832 T-A----------G---------AT
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            1557  5 +     68526 T-T----------T---------AC
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        41703  5 +     89929 T-T----------T---------AC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43117  5 +     51399 T-T----------T---------AC
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299354  5 -  14605196 t-t----------t---------ac
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3137  6 +     22620 G-T----------T--------TTT
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 11 C 0
s Pithecia_albicans.k141_1476471                              5004  5 +     26961 T-T----------T---------AC
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1149  5 +     23417 T-T----------T---------AC
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                4996  5 +     29694 T-T----------T---------AC
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          30022  5 +     52772 T-T----------T---------AC
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           5018  5 +     26198 T-T----------T---------AC
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3941566  5 +   4542175 T-T----------T---------AC
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            4982  5 -     23490 T-T----------T---------AC
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9238  5 -     39866 T-T----------T---------AC
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18404  5 +     34906 T-T----------T---------AC
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       22666  5 +     87950 T-T----------T---------AC
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23495  5 +     88961 T-T----------T---------AC
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9166  5 +     39403 T-T----------T---------AC
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          22947  5 -     87928 T-T----------T---------AC
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         29906  5 +     60166 T-T----------T---------AC
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30103  5 +     67232 T-T----------T---------AC
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          25576  5 +     90634 T-T----------T---------AC
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          22948  5 -     89403 T-T----------T---------AC
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189134476  5 + 189387572 t-t----------t---------at
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9574085  5 +   9816681 t-t----------t---------at
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76657  5 -     81375 T-T----------T---------AT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8474  5 +     19060 T-T----------T---------AT
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            12286  5 -     21651 a-t----------t---------tt
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            16545  6 -     21811 a-t----------tt--------tt
i Pteronotus_parnellii.KE909381.1                        I 11 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41963 15 +     42204 A-TCTCACAATATC---------AT
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 1 C 0
s Pteropus_alecto.KB030862.1                              22978144  5 +  28871421 a-t----------t---------tt
i Pteropus_alecto.KB030862.1                             I 11 C 0
s Puma_concolor.QAVW01001104.1                            20275672 12 -  38429054 t-att--ta-tatt---------tt
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             18466  5 -     91421 T-T----------T---------AC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612589  5 +   7812017 T-T----------T---------AC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18496  5 -     72585 T-T----------T---------AC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6911  5 +     55207 T-A----------C---------AT
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinopithecus_bieti.k119_217274                            10164  5 -     11128 T-T----------T---------AC
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239532  5 - 195417433 t-t----------t---------ac
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675179  5 +   7961872 T-T----------T---------AC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89234  5 -     96226 A-T----------T---------TT
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 11 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154536  4 -    313613 A-T----------T----------T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                         3338  5 -     12572 T-T----------T---------AC
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30190  5 +     39453 T-T----------T---------AC
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           10698  5 +     27826 T-T----------T---------AC
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10239  5 -     19483 T-T----------T---------AC
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3537  5 -     12762 T-T----------T---------AC
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3382  5 +     13763 T-T----------T---------AC
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     2184  5 -     30804 A-A----------T---------TT
i Sigmodon_hispidus.SigHis_scaffold_42075                I 3 C 0
s Sorex_araneus.JH798187.1                                13652361  5 -  18376816 a-t----------a---------tt
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1955521  5 -   3870691 a-c----------t---------tt
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             32419 15 +     97271 a-tttcacaatatt---------at
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 1 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              19696 12 -    196729 T-A---TTTATATT---------TT
i Suricata_suricatta.SurSur_flattened_line_6629          I 4 C 0
s Sus_scrofa.CM000828.4                                    6812523  5 +  69701581 t-a----------g---------at
i Sus_scrofa.CM000828.4                                  C 0 I 539
s Tadarida_brasiliensis.TadBra_scaffold_25820                12581  6 +     41958 A-T----------T--------TTT
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 367 C 0
s Tarsius_lariang.k141_2201908                               27167  5 +     70052 A-T----------T---------AC
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1964  5 -     16117 A-T----------T---------AC
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186431866  5 + 186847797 t-t----------t---------ac
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106778  5 +    114563 A-T----------A---------TT
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     82606  6 +    610378 G-T----------T--------TTT
i Tonatia_saurophila.TonSau_scaffold_294                 I 11 C 0
s Trachypithecus_auratus.k141_722599                         14276  5 -     20410 T-T----------T---------AC
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3399  5 -     12674 T-T----------T---------AC
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14384  5 +     19930 T-T----------T---------AC
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      10786  5 -     19997 T-T----------T---------AC
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            50928  5 -     60166 T-T----------T---------AC
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18390  5 -     27529 T-T----------T---------AC
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                      24  5 +      9131 T-T----------T---------AC
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28256  5 +     32220 T-T----------T---------AC
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942353  5 +   6242583 T-T----------T---------AC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11606  5 +     20839 T-T----------T---------AC
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    1212  5 +     27266 T-A----------C---------AT
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tupaia_chinensis.KB320699.1                              2157532  4 +   4065304 c-t----------t---------a-
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15739294  5 +  33153633 t-a----------g---------at
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54648  4 -     77625 --T----------G---------AT
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4851805 14 -   5085361 t-tt-cacaatacc---------at
i Ursus_maritimus.KK499267.1                             I 1 C 0
s Vicugna_pacos.KN270157.1                                 5373346  3 -   5488506 -------------g---------TT
i Vicugna_pacos.KN270157.1                               I 3 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 13497 14 -     43706 t-ttt-acaatatc---------at
i Vulpes_lagopus.VulLag_flattened_line_30954             I 1 T 1302
s Xerus_inauris.XerIna_scaffold_2302                          2517  5 +    224448 A-T----------T---------TT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      16206  5 +     63895 A-T----------T---------TT
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Trachypithecus_laotum.k141_907409                          11930  0 -     21137 C
e Trachypithecus_hatinhensis.k141_17719                         27  0 +      9229 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   7643  0 +      8208 C
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73921  0 +    116680 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Rhinolophus_sinicus.LVEH01000134.1                        368295  0 -   3329780 C
e Rattus_norvegicus.chr16                                 53571770 803 +  90668790 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odocoileus_virginianus.KZ100018.1                         145852 291 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190536  0 +    196477 C
e Myotis_brandtii.KE162005.1                                280096 2104 -  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Megaderma_lyra.MegLyr_scaffold_4542                        14651  0 -    207569 C
e Manis_pentadactyla.KN006162.1                              51623 129 -    317179 I
e Manis_javanica.JSZB01003497.1                              19605 129 +    737560 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23212  0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_101188                404  0 +      9903 C
e Hipposideros_armiger.JXIK01000431.1                       111834  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2147983 500 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 34877  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64769  0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_15900             1237  0 -     75252 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           1799  0 +     23735 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1750  0 -      8501 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                       101968  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18363086  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18350823  0 -  23392119 C
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C

a score=0.000000
s hg38.chrUn_KI270753v1                                      10124 4 +     62944 ATT-T
s Acinonyx_jubatus.LLWD01001279.1                           828677 2 -   1699592 t---t
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     72642 2 +     87051 A---C
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9512016 2 -  29979442 g---t
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             81097 2 -    347723 G---G
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 77
s Allactaga_bullata.AllBul_scaffold_9566                     75742 2 -     89534 A---T
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   17987 4 -     52922 ATT-T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         17924 4 -     28001 att-t
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8419 4 -     18505 att-t
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9272 4 -     12518 ATT-T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              9735 4 +     51355 att-t
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                2840 4 -     36483 att-t
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13295 4 +     28687 att-t
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 1765 4 +     27940 att-t
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            2844 4 -      9457 att-t
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             1802 4 +     30492 att-t
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              5795 4 +     47717 att-t
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              2532 4 +      5663 att-t
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             16984 4 +     50774 att-t
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          677126 2 -   2318259 g---t
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      186771 2 +    412891 A---T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             99603 2 -    100397 G---T
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      14037 2 +     20879 G---A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6177 2 +     43469 A---T
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21209996 4 -  21539123 att-t
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               44792 4 -     48001 att-t
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 27596 4 -     30947 ATT-T
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9368 4 -     89868 att-t
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              13752 4 -     40414 ATT-T
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                21641 4 +     72325 att-t
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193163 2 +  23207421 a---t
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         3628 2 -     18090 a---t
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    28213 2 +     34529 G---T
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    201772 2 -    288883 T---T
i Bison_bison.KN261452.1                                 I 3 C 0
s Bos_indicus.CM003047.1                                  20274955 2 +  48749331 T---T
i Bos_indicus.CM003047.1                                 I 3 C 0
s Bos_mutus.JH880303.1                                     1127507 2 -   1948126 T---T
i Bos_mutus.JH880303.1                                   I 3 C 0
s Bos_taurus.CM000203.6                                   18085593 2 +  45695690 T---T
i Bos_taurus.CM000203.6                                  I 3 C 0
s Bubalus_bubalis.KI419123.1                               2821548 2 +   4408762 g---t
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                102618 4 -    122966 ATT-T
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   62123 4 +     81800 ATT-T
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31303 4 -     95584 ATT-T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55404 4 -    119600 att-t
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10003828 2 -  17673402 A---T
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2336300 2 -   7040546 A---T
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  404598 2 -   1652518 A---T
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17801894 2 -  60362399 g---t
i CanFam4.chr16                                          C 0 T 1303
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     2635 2 -     43241 g---t
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 T 1296
s Canis_lupus_dingo.QKWQ01000480.1                         9037337 2 -   9314153 g---t
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 T 1303
s Canis_lupus_familiaris.chr16                            17961806 2 -  59632846 g---t
i Canis_lupus_familiaris.chr16                           C 0 T 1296
s Canis_lupus_orion.HG994398.1                            18503108 2 +  63665305 g---t
i Canis_lupus_orion.HG994398.1                           C 0 T 1301
s Capra_aegagrus.CM003241.1                               18831237 2 +  46296322 g---t
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18061957 2 -  44709034 g---t
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    2333 2 -     12242 A---T
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           156679 4 -    496798 att-t
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6519 2 -     11696 A---T
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138648 2 +    179628 A---C
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     95487 1 +    217609 ----T
i Catagonus_wagneri.CatWag_scaffold_2839                 I 524 C 0
s Cephalopachus_bancanus.k141_1423433                         6177 4 +     31688 ATT-T
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4478950 4 +   4669795 att-t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3444 4 +     17872 ATT-T
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4039 4 -     14043 ATT-T
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12134 4 +     27781 ATT-T
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12284 4 -     20310 ATT-T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15264 4 +     29689 ATT-T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10020 4 -     20078 ATT-T
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          17935 4 -     27936 ATT-T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            6802 4 -     17152 ATT-T
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826534 4 +  39242232 ATT-T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226038 4 -  21565898 ATT-T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43157 4 -     53127 ATT-T
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3407 4 +     13442 ATT-T
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       17953 4 -     27947 ATT-T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                          982 4 +     10558 ATT-T
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          3987 4 +     14005 ATT-T
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1224 4 -     17098 ATT-T
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1100 4 +     17877 ATT-T
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            158667 4 -    216457 ATT-T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63142 4 +     76511 ATT-T
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254263 2 +   2543920 a---t
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_israelita.k141_747660                           99747 4 +    146308 ATT-C
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          31555 4 -     50570 ATT-C
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18431857 4 -  18827391 ATT-T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18354 4 -     50209 ATT-T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425358 4 + 135778131 att-t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1913859 4 +   2368649 att-t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952107 4 + 200372422 ATT-T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40384 4 +     84244 ATT-T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549401 2 -  53390261 a---t
i Condylura_cristata.JH655891.1                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 51898 2 +     63868 A---A
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               4144 2 -     19598 A---C
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29875 3 -     87169 T--AT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37293 2 +     51376 A---T
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900             1237 2 -     75252 A---T
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16812796 2 +  35494412 a---t
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8631517 2 +  20541912 a---t
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37751 2 +     67921 A---T
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       312285 2 +    607251 g---t
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          22407 2 -    110024 a---c
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                            2327 2 +      8657 a---c
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16331064 2 -  41312741 g---t
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Erythrocebus_patas.Contig38                             21208530 4 -  21539334 ATT-T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12475 2 +    133382 A---T
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             26428 2 -     44125 A---T
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20238320 2 + 206538554 t---t
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20197163 2 + 205367284 t---t
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 10917 2 -     36744 T---T
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             851773 2 +   3816255 a---t
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               3731 2 -      9135 A---T
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     610244 2 -    660261 g---t
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Gorilla_beringei.k141_3596273                              19369 4 -     32273 ATT-T
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341505 4 + 186649187 att-t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33980 2 +     78134 A---T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243713 3 +    327341 T--AT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 19446 2 +     36099 G---T
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20663561 2 +  22651954 a---t
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hoolock_leuconedys.ctg274                                    438163 4 +    630532 ATT-T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46418 1 +     55795 C----
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 1
s Hystrix_cristata.HysCri_scaffold_5660                      84452 2 +    135385 A---T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7522380 2 -   7955117 a---c
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                  28 2 -     31341 A---T
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8278476 2 -   9596543 a---t
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                    2 2 -     18011 A---T
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         15800 4 -     38430 ATT-T
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    17763 2 -     42476 a---t
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3044499 2 +   3914936 g---t
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     8302 2 -     14121 A---T
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             269066 2 -    662738 a---t
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1440492 4 +   1826925 ATT-T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17958046 2 -  59628241 g---t
i Lycaon_pictus.CM007581.1                               C 0 T 1296
s Macaca_arctoides.k141_2326796                              10302 4 +     40492 ATT-T
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679556 4 +  60120075 ATT-T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16073 4 -     26193 ATT-T
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            83849 4 -    114318 att-t
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9540 4 -     23192 ATT-T
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19004 4 -     29190 ATT-T
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27582 4 +     37952 ATT-T
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842659 4 + 187317192 att-t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461237 4 -  25927173 att-t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83438 4 +     89720 ATT-T
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10431 4 +     20474 ATT-T
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10228 4 -     14993 ATT-T
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333090 4 -    668171 ATT-T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8540 4 -     24072 ATT-T
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29171 4 -     45290 ATT-T
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92058 2 +     94391 A---T
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23940759 4 -  24302211 ATT-T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354875 4 +    752769 att-t
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33104661 2 -  40650429 a---c
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             11783 2 +     13704 G---T
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 34650 2 +    140813 A---C
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12184107 2 -  29670104 a---c
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    4684 2 +     10310 A---T
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                17268 2 -     19307 A---T
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11262390 2 -  27267610 a---t
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1851676 2 +   8254450 a---t
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             35356 2 +     64694 A---T
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                          12435 4 -     28506 ATT-T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         7367 2 -      8324 g---t
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    28179 2 -    437263 A---T
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 143064 2 -    366855 A---T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   2308 2 +     82753 G---T
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           8388 2 +     14753 A---T
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84363037 2 - 120012414 a---c
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87652538 2 - 129401213 A---C
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31357272 2 -  89631738 a---c
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90755027 2 - 130317789 a---t
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               303165 2 -  14710649 G---T
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     72515 2 -     80779 A---T
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_davidii.KB100139.1                                1589441 2 -   6019432 a---t
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3905531 2 -   4330536 a---t
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                        1685 2 +      1835 a---t
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 C 0
s Nannospalax_galili.KL204047.1                            2036830 2 -   3037898 a---t
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               18485 4 +     21681 ATT-T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308960 2 +  31847680 g---t
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5867143 2 +   7148211 a---t
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    759259 2 +    783361 A---T
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150819 2 -   9404916 a---t
i Nyctereutes_procyonoides.CAJHUB010000658.1             T 1159 C 0
s Ochotona_princeps.JH802162.1                             1365705 2 +   3988456 a---a
i Ochotona_princeps.JH802162.1                           I 4 C 0
s Odobenus_rosmarus.KB229312.1                              508102 2 -   2017862 g---t
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          78160 2 -    150152 g---t
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   27048 2 +     28053 A---C
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    82051 2 +    102263 A---C
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2783057 2 -  10937097 a---t
i Orcinus_orca.KB316932.1                                C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67149202 2 + 174332312 a---t
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       463764 2 -    559221 g---t
i Otocyon_megalotis.JAEUCK010005147.1                    T 1638 C 0
s Ovis_aries.CM001607.2                                   17587419 2 +  44047080 g---t
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      175411 2 -    191736 G---T
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    47470 4 +     80009 att-t
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.KZ622849.1                                 25659 4 +    110857 att-t
i Pan_troglodytes.KZ622849.1                             C 0 I 94
s Panthera_onca.PanOnc_flattened_line_3271                  152526 2 +    230217 T---T
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                265735 2 +  18783137 t---t
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4722615 2 -   8748460 t---t
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1266316 2 -   2937107 g---t
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183446565 4 + 183742232 att-t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10215 4 +     20448 ATT-T
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567023 4 +  20919399 att-t
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   8955 4 +     41871 ATT-T
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12248 4 +     27711 ATT-T
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3247 4 -     11374 ATT-T
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14037 1 -     78924 ----T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18196678 2 -  18517816 a---t
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_42190                     29488 2 -     29689 A---C
i Petromus_typicus.PetTyp_scaffold_42190                 C 0 N 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              10100 2 +     63832 A---T
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            1562 4 +     68526 ATT-T
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        41708 4 +     89929 ATT-T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43122 4 +     51399 ATT-T
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299359 4 -  14605196 att-t
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3143 2 +     22620 A---T
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pithecia_albicans.k141_1476471                              5009 4 +     26961 ATT-C
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1154 4 +     23417 ATT-C
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                5001 4 +     29694 ATT-C
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          30027 4 +     52772 ATT-C
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           5023 4 +     26198 ATT-C
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3941571 4 +   4542175 ATT-C
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            4987 4 -     23490 ATT-C
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9243 4 -     39866 ATT-T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18409 4 +     34906 ATT-T
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       22671 4 +     87950 ATT-T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23500 4 +     88961 ATT-T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9171 4 +     39403 ATT-T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          22952 4 -     87928 ATT-T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         29911 4 +     60166 ATT-T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30108 4 +     67232 ATT-T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          25581 4 +     90634 ATT-T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          22953 4 -     89403 ATT-T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189134481 4 + 189387572 att-t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9574090 4 +   9816681 att-t
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76662 4 -     81375 ATT-T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8479 4 +     19060 ATT-T
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            12291 2 -     21651 a---c
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            16551 2 -     21811 a---t
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41978 2 +     42204 G---T
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 C 0
s Pteropus_alecto.KB030862.1                              22978149 2 +  28871421 a---t
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Puma_concolor.QAVW01001104.1                            20275684 2 -  38429054 t---t
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             18471 4 -     91421 ATT-T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612594 4 +   7812017 ATT-T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18501 4 -     72585 ATT-T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6916 2 +     55207 G---T
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinopithecus_bieti.k119_217274                            10169 4 -     11128 ATT-T
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239537 4 - 195417433 att-t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675184 4 +   7961872 ATT-T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89239 2 -     96226 A---T
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154540 2 -    313613 C---T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                         3343 4 -     12572 ATT-T
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30195 4 +     39453 ATT-T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           10703 4 +     27826 ATT-T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10244 4 -     19483 ATT-T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3542 4 -     12762 ATT-T
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3387 4 +     13763 ATT-T
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     2189 2 -     30804 A---C
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Sorex_araneus.JH798187.1                                13652366 2 -  18376816 a---c
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1955526 2 -   3870691 a---c
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             32434 2 +     97271 g---t
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              19708 3 -    196729 T--AC
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6813067 2 +  69701581 A---T
i Sus_scrofa.CM000828.4                                  I 539 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                12587 2 +     41958 A---T
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tarsius_lariang.k141_2201908                               27172 4 +     70052 ATT-T
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1969 4 -     16117 ATT-T
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186431871 4 + 186847797 att-t
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106783 2 +    114563 A---C
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     82612 2 +    610378 A---T
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         14281 4 -     20410 ATT-T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3404 4 -     12674 ATT-T
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14389 4 +     19930 ATT-T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      10791 4 -     19997 ATT-T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            50933 4 -     60166 ATT-T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18395 4 -     27529 ATT-T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                         27 3 +      9229 -TT-T
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          11930 3 -     21137 -TT-T
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                      29 4 +      9131 ATT-T
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28261 4 +     32220 ATT-T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942358 4 +   6242583 ATT-T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11611 4 +     20839 ATT-T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    1217 2 +     27266 G---T
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tupaia_chinensis.KB320699.1                              2157536 1 +   4065304 ----t
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15739299 2 +  33153633 a---t
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54652 2 -     77625 A---T
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4851819 2 -   5085361 g---t
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                 5373349 2 -   5488506 A---T
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 12209 2 -     43706 G---T
i Vulpes_lagopus.VulLag_flattened_line_30954             T 1302 C 0
s Xerus_inauris.XerIna_scaffold_2302                          2522 2 +    224448 A---C
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      16211 2 +     63895 A---C
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202 0 +      8798 C
e Galago_senegalensis.k141_631886                             7400 0 +     11339 C
e Galago_moholi.ctg2040                                     429710 0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964 2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445 0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734 0 -     33856 C
e Perodicticus_potto.k141_1186926                              597 0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219 0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   7643 0 +      8208 C
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73921 0 +    116680 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Rhinolophus_sinicus.LVEH01000134.1                        368295 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53571770 803 +  90668790 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odocoileus_virginianus.KZ100018.1                         145852 291 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869 0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414 0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947 0 - 196305487 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190536 0 +    196477 C
e Myotis_brandtii.KE162005.1                                280096 2104 -  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398 7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Megaderma_lyra.MegLyr_scaffold_4542                        14651 0 -    207569 C
e Manis_pentadactyla.KN006162.1                              51623 129 -    317179 I
e Manis_javanica.JSZB01003497.1                              19605 129 +    737560 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23212 0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_101188                404 0 +      9903 C
e Hipposideros_armiger.JXIK01000431.1                       111834 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Glis_glis.GliGli_scaffold_19807                            32299 2 +     49224 I
e Galagoides_demidoff.k141_1711393                            4689 0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2147983 500 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 34877 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64769 0 +   2246927 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11668671 0 + 224834208 C
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           1799 0 +     23735 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1750 0 -      8501 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                       101968 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18363086 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18350823 0 -  23392119 C
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538 0 +      5281 C

a score=0.000000
s hg38.chrUn_KI270753v1                                      10128 2 +     62944 AT
s Acinonyx_jubatus.LLWD01001279.1                           828679 2 -   1699592 at
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 2
s Acomys_cahirinus.AcoCah_scaffold_12655                     72644 1 +     87051 A-
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9512018 2 -  29979442 ta
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 2
s Ailurus_fulgens.LNAC01001112.1                             81176 2 -    347723 TA
i Ailurus_fulgens.LNAC01001112.1                         I 77 I 2
s Allactaga_bullata.AllBul_scaffold_9566                     75744 2 -     89534 AT
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 3
s Allenopithecus_nigroviridis.k141_3361533                   17991 2 -     52922 AT
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         17928 2 -     28001 at
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8423 2 -     18505 at
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9276 2 -     12518 AT
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              9739 2 +     51355 at
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                2844 2 -     36483 at
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13299 2 +     28687 at
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 1769 2 +     27940 at
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            2848 2 -      9457 at
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             1806 2 +     30492 at
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              5799 2 +     47717 at
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              2536 2 +      5663 at
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             16988 2 +     50774 at
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          677128 2 -   2318259 gt
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 2
s Anoura_caudifer.AnoCau_scaffold_1412                      186773 2 +    412891 AC
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 2
s Antilocapra_americana.AntAmePen_scaffold_12469             99605 2 -    100397 GT
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 I 2
s Aplodontia_rufa.AprRuf_scaffold_68852                      14039 2 +     20879 AT
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 11
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6179 2 +     43469 AC
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 2
s Ateles_geoffroyi_b.tarseq_1536                             21210000 2 -  21539123 at
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               44796 2 -     48001 at
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 27600 2 -     30947 AT
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9372 2 -     89868 at
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              13756 2 -     40414 AT
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                21645 2 +     72325 at
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193165 2 +  23207421 gt
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 2
s Balaenoptera_bonaerensis.DF707048.1                         3630 2 -     18090 gt
i Balaenoptera_bonaerensis.DF707048.1                    C 0 I 2
s Beatragus_hunteri.BeaHun_scaffold_50177                    28215 2 +     34529 GT
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 2
s Bison_bison.KN261452.1                                    201774 2 -    288883 GT
i Bison_bison.KN261452.1                                 C 0 I 2
s Bos_indicus.CM003047.1                                  20274957 2 +  48749331 GT
i Bos_indicus.CM003047.1                                 C 0 I 2
s Bos_mutus.JH880303.1                                     1127509 2 -   1948126 GT
i Bos_mutus.JH880303.1                                   C 0 I 2
s Bos_taurus.CM000203.6                                   18085595 2 +  45695690 GT
i Bos_taurus.CM000203.6                                  C 0 I 2
s Bubalus_bubalis.KI419123.1                               2821550 2 +   4408762 gt
i Bubalus_bubalis.KI419123.1                             C 0 I 2
s Cacajao_ayresi.k141_552049                                102622 2 -    122966 AT
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   62127 2 +     81800 AT
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31307 2 -     95584 AT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55408 2 -    119600 at
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10003830 2 -  17673402 GT
i Camelus_bactrianus.KN276810.1                          C 0 I 2
s Camelus_dromedarius.KN272107.1                           2336302 2 -   7040546 GT
i Camelus_dromedarius.KN272107.1                         C 0 I 2
s Camelus_ferus.KB017975.1                                  404600 2 -   1652518 GT
i Camelus_ferus.KB017975.1                               C 0 I 2
s CanFam4.chr16                                           17800593 2 -  60362399 AT
i CanFam4.chr16                                          T 1303 I 2
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     1341 2 -     43241 AT
i Canis_lupus_VD.CanFam_VD_scaffold_27089                T 1296 I 2
s Canis_lupus_dingo.QKWQ01000480.1                         9036036 2 -   9314153 at
i Canis_lupus_dingo.QKWQ01000480.1                       T 1303 I 2
s Canis_lupus_familiaris.chr16                            17960512 2 -  59632846 at
i Canis_lupus_familiaris.chr16                           T 1296 I 2
s Canis_lupus_orion.HG994398.1                            18501809 2 +  63665305 at
i Canis_lupus_orion.HG994398.1                           T 1301 I 2
s Capra_aegagrus.CM003241.1                               18831239 2 +  46296322 gt
i Capra_aegagrus.CM003241.1                              C 0 I 2
s Capra_hircus.CM004588.1                                 18061959 2 -  44709034 gt
i Capra_hircus.CM004588.1                                C 0 I 2
s Capromys_pilorides.CapPil_scaffold_65020                    2335 2 -     12242 AC
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 13
s Carlito_syrichta.NW_007259797.1                           156683 2 -    496798 at
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6521 2 -     11696 AC
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 2
s Castor_canadensis.CasCan_scaffold_2074                    138650 2 +    179628 CT
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 2
s Catagonus_wagneri.CatWag_scaffold_2839                     95488 2 +    217609 AT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 3
s Cavia_aperea.AVPZ01000300.1                             18350823 1 -  23392119 -t
i Cavia_aperea.AVPZ01000300.1                            C 0 I 13
s Cavia_porcellus.DS562891.1                              18363086 1 -  23407841 -T
i Cavia_porcellus.DS562891.1                             C 0 I 13
s Cavia_tschudii.CavTsc_scaffold_8919                       101968 1 +    143979 -T
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 I 13
s Cephalopachus_bancanus.k141_1423433                         6181 2 +     31688 AT
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4478954 2 +   4669795 at
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3448 2 +     17872 AT
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4043 2 -     14043 AT
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12138 2 +     27781 AT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12288 2 -     20310 AT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15268 2 +     29689 AT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10024 2 -     20078 AT
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          17939 2 -     27936 AT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            6806 2 -     17152 AT
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826538 2 +  39242232 AT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226042 2 -  21565898 AT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43161 2 -     53127 AT
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3411 2 +     13442 AT
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       17957 2 -     27947 AT
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                          986 2 +     10558 AT
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          3991 2 +     14005 AT
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1228 2 -     17098 AT
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1104 2 +     17877 AT
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            158671 2 -    216457 AT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63146 2 +     76511 AT
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254265 2 +   2543920 at
i Chinchilla_lanigera.JH722012.1                         C 0 I 13
s Chiropotes_israelita.k141_747660                           99751 2 +    146308 AT
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          31559 2 -     50570 AT
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18431861 2 -  18827391 AT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18358 2 -     50209 AT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425362 2 + 135778131 at
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1913863 2 +   2368649 at
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952111 2 + 200372422 AT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40388 2 +     84244 AT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549403 2 -  53390261 at
i Condylura_cristata.JH655891.1                          C 0 I 2
s Cricetomys_gambianus.CriGam_scaffold_18520                 51900 1 +     63868 G-
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               4146 2 -     19598 AT
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 I 2
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29878 2 -     87169 AT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 2
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37295 2 +     51376 AC
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 13
s Dasyprocta_punctata.DasPun_flattened_line_15900             1239 2 -     75252 AT
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 13
s Delphinapterus_leucas.KZ290073.1                        16812798 2 +  35494412 gt
i Delphinapterus_leucas.KZ290073.1                       C 0 I 2
s Desmodus_rotundus.KZ672289.1                             8631519 2 +  20541912 ac
i Desmodus_rotundus.KZ672289.1                           C 0 I 2
s Dinomys_branickii.DinBra_scaffold_21862                    37753 2 +     67921 AT
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 11
s Dolichotis_patagonum.DolPat_scaffold_30833                 34877 1 -     42551 -T
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 I 13
s Elaphurus_davidianus.JRFZ01104969.1                       312287 2 +    607251 gc
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 2
s Ellobius_lutescens.LOEQ01008920.1                          22409 1 -    110024 a-
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                            2329 1 +      8657 a-
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16331066 2 -  41312741 tg
i Enhydra_lutris.KZ291758.1                              C 0 I 2
s Erythrocebus_patas.Contig38                             21208534 2 -  21539334 AT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12477 2 +    133382 GT
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 2
s Eubalaena_japonica.EubJap_flattened_line_31514             26430 2 -     44125 GT
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 I 2
s Felis_catus.CM001381.2                                  20238322 2 + 206538554 at
i Felis_catus.CM001381.2                                 C 0 I 3
s Felis_catus_fca126.CM031415.1                           20197165 2 + 205367284 at
i Felis_catus_fca126.CM031415.1                          C 0 I 3
s Felis_nigripes.FelNig_flattened_line_20823                 10919 2 -     36744 at
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 3
s Fukomys_damarensis.KN121974.1                             851775 2 +   3816255 at
i Fukomys_damarensis.KN121974.1                          C 0 I 2
s Galeopterus_variegatus.GalVar_scaffold_108840               3733 2 -      9135 AT
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 I 2
s Giraffa_tippelskirchi.LVKQ01S007888.1                     610246 2 -    660261 gc
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 I 2
s Gorilla_beringei.k141_3596273                              19373 2 -     32273 AT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341509 2 + 186649187 at
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33982 2 +     78134 AT
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 2
s Helogale_parvula.HelPar_flattened_line_2585               243716 2 +    327341 AT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 2
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 19448 2 +     36099 GT
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 I 2
s Heterocephalus_glaber.JH602082.1                        20663563 2 +  22651954 at
i Heterocephalus_glaber.JH602082.1                       C 0 I 2
s Hoolock_leuconedys.ctg274                                    438167 2 +    630532 AT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23212 1 -    143317 -C
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 13
s Hystrix_cristata.HysCri_scaffold_5660                      84454 2 +    135385 AT
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 2
s Ictidomys_tridecemlineatus.JH393364.1                    7522382 2 -   7955117 at
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 4
s Inia_geoffrensis.IniGeo_flattened_line_34779                  30 2 -     31341 GT
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 I 2
s Jaculus_jaculus.JH725527.1                               8278478 2 -   9596543 at
i Jaculus_jaculus.JH725527.1                             C 0 I 3
s Kogia_breviceps.KogBre_flattened_line_81059                    4 2 -     18011 GT
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 I 2
s Lagothrix_lagothricha.k141_1005387                         15804 2 -     38430 AT
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    17765 2 -     42476 at
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 2
s Leptonychotes_weddellii.KB714746.1                       3044501 2 +   3914936 ta
i Leptonychotes_weddellii.KB714746.1                     C 0 I 2
s Lepus_americanus.LepAme_scaffold_107385                     8304 2 -     14121 AT
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 5
s Lipotes_vexillifer.KE559953.1                             269068 2 -    662738 gt
i Lipotes_vexillifer.KE559953.1                          C 0 I 2
s Lophocebus_aterrimus.ctg367                              1440496 2 +   1826925 AT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17956752 2 -  59628241 at
i Lycaon_pictus.CM007581.1                               T 1296 I 2
s Macaca_arctoides.k141_2326796                              10306 2 +     40492 AT
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679560 2 +  60120075 AT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16077 2 -     26193 AT
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            83853 2 -    114318 at
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9544 2 -     23192 AT
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19008 2 -     29190 AT
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27586 2 +     37952 AT
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842663 2 + 187317192 at
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461241 2 -  25927173 at
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83442 2 +     89720 AT
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10435 2 +     20474 AT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10232 2 -     14993 AT
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333094 2 -    668171 AT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8544 2 -     24072 AT
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29175 2 -     45290 AT
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92060 2 +     94391 AT
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 2
s Mandrillus_leucophaeus.scaffold280                      23940763 2 -  24302211 AT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354879 2 +    752769 at
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33104663 2 -  40650429 at
i Marmota_marmota.CZRN01000018.1                         C 0 I 4
s Mellivora_capensis.MelCap_flattened_line_69365             11785 2 +     13704 TG
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 2
s Meriones_unguiculatus.MerUng_scaffold_7390                 34652 1 +    140813 A-
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12184109 1 -  29670104 a-
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    4686 2 +     10310 GT
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 I 12
s Micronycteris_hirsuta.MicHir_scaffold_52381                17270 2 -     19307 TC
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 2
s Microtus_ochrogaster.CM001695.1                         11262392 1 -  27267610 a-
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1851678 2 +   8254450 gc
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 2
s Miniopterus_schreibersii.MinSch_scaffold_18080             35358 2 +     64694 GC
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 2
s Miopithecus_ogouensis.k141_534055                          12439 2 -     28506 AT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         7369 2 -      8324 ta
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 2
s Monodon_monoceros.MonMon_M_scaffold_103                    28181 2 -    437263 GT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 2
s Mormoops_blainvillei.MorMeg_scaffold_1417                 143066 2 -    366855 AC
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 2
s Moschus_moschiferus.MosMos_scaffold_13123                   2310 2 +     82753 GT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 2
s Murina_feae.MurFea_scaffold_85699                           8390 2 +     14753 GT
i Murina_feae.MurFea_scaffold_85699                      C 0 I 2
s Mus_caroli.LT608237.1                                   84363039 1 - 120012414 a-
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87652540 1 - 129401213 A-
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31357274 1 -  89631738 a-
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90755029 1 - 130317789 a-
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               303167 2 -  14710649 TG
i Mustela_putorius.JH418006.1                            C 0 I 2
s Myocastor_coypus.MyoCoy_scaffold_10123                     72517 2 -     80779 AC
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 I 13
s Myotis_davidii.KB100139.1                                1589443 2 -   6019432 at
i Myotis_davidii.KB100139.1                              C 0 I 2
s Myotis_lucifugus.GL429869.1                              3905533 2 -   4330536 gt
i Myotis_lucifugus.GL429869.1                            C 0 I 2
s Myotis_myotis.MyoMyo_scaffold_281845                        1687 2 +      1835 at
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 I 2
s Nannospalax_galili.KL204047.1                            2036832 1 -   3037898 t-
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               18489 2 +     21681 AT
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308962 2 +  31847680 ta
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 2
s Neophocaena_asiaeorientalis.KZ687982.1                   5867145 2 +   7148211 gt
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 2
s Noctilio_leporinus.NocLep_scaffold_251                    759261 2 +    783361 AC
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 2
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150821 2 -   9404916 gt
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 2
s Ochotona_princeps.JH802162.1                             1365707 2 +   3988456 at
i Ochotona_princeps.JH802162.1                           C 0 I 5
s Odobenus_rosmarus.KB229312.1                              508104 2 -   2017862 ta
i Odobenus_rosmarus.KB229312.1                           C 0 I 2
s Okapia_johnstoni.LVCL01S0005463.1                          78162 2 -    150152 gc
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 2
s Ondatra_zibethicus.OndZib_scaffold_46174                   27050 1 +     28053 C-
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    82053 1 +    102263 A-
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2783059 2 -  10937097 gt
i Orcinus_orca.KB316932.1                                C 0 I 4
s Oryctolagus_cuniculus.CM000791.1                        67149204 2 + 174332312 at
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 5
s Otocyon_megalotis.JAEUCK010005147.1                       463766 2 -    559221 at
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 2
s Ovis_aries.CM001607.2                                   17587421 2 +  44047080 gt
i Ovis_aries.CM001607.2                                  C 0 I 2
s Ovis_canadensis.OviCan_scaffold_2572                      175413 2 -    191736 GT
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 I 2
s Pan_paniscus.KQ411613.1                                    47474 2 +     80009 at
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146341 2 + 189151597 at
i Pan_troglodytes.CM009242.2                             I 7 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152528 2 +    230217 AT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 2
s Panthera_pardus.KV860321.1                                265737 2 +  18783137 at
i Panthera_pardus.KV860321.1                             C 0 I 2
s Panthera_tigris.KE722367.1                               4722617 2 -   8748460 at
i Panthera_tigris.KE722367.1                             C 0 I 2
s Pantholops_hodgsonii.KE114653.1                          1266318 2 -   2937107 gt
i Pantholops_hodgsonii.KE114653.1                        C 0 I 2
s Papio_anubis.CM001495.2                                183446569 2 + 183742232 at
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10219 2 +     20448 AT
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567027 2 +  20919399 at
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   8959 2 +     41871 AT
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12252 2 +     27711 AT
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3251 2 -     11374 AT
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14038 2 -     78924 AT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 2
s Peromyscus_maniculatus.KI615324.1                       18196680 1 -  18517816 a-
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_221660                        0 2 -      2102 AT
i Petromus_typicus.PetTyp_scaffold_221660                N 0 I 2
s Phocoena_phocoena.PhoPho_flattened_line_24159              10102 2 +     63832 GT
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 2
s Piliocolobus_badius.k141_1142974                            1566 2 +     68526 AT
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        41712 2 +     89929 AT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43126 2 +     51399 AT
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299363 2 -  14605196 at
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3145 2 +     22620 AT
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 1
s Pithecia_albicans.k141_1476471                              5013 2 +     26961 AT
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1158 2 +     23417 AT
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                5005 2 +     29694 AT
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          30031 2 +     52772 AT
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           5027 2 +     26198 AT
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3941575 2 +   4542175 AT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            4991 2 -     23490 AT
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9247 2 -     39866 AT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18413 2 +     34906 AT
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       22675 2 +     87950 AT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23504 2 +     88961 AT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9175 2 +     39403 AT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          22956 2 -     87928 AT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         29915 2 +     60166 AT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30112 2 +     67232 AT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          25585 2 +     90634 AT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          22957 2 -     89403 AT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189134485 2 + 189387572 at
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9574094 2 +   9816681 at
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76666 2 -     81375 AT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8483 2 +     19060 AT
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            12293 1 -     21651 a-
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            16553 2 -     21811 ac
i Pteronotus_parnellii.KE909381.1                        C 0 I 4
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41980 2 +     42204 TG
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 2
s Pteropus_alecto.KB030862.1                              22978151 2 +  28871421 at
i Pteropus_alecto.KB030862.1                             C 0 I 2
s Puma_concolor.QAVW01001104.1                            20275686 2 -  38429054 at
i Puma_concolor.QAVW01001104.1                           C 0 I 2
s Pygathrix_cinerea.k141_1153803                             18475 2 -     91421 AT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612598 2 +   7812017 AT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18505 2 -     72585 AT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6918 2 +     55207 GC
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 2
s Rhinopithecus_bieti.k119_217274                            10173 2 -     11128 AT
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239541 2 - 195417433 at
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675188 2 +   7961872 AT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89241 2 -     96226 AT
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 2
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154542 2 -    313613 AT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 2
s Semnopithecus_entellus.k141_1672505                         3347 2 -     12572 AT
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30199 2 +     39453 AT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           10707 2 +     27826 AT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10248 2 -     19483 AT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3546 2 -     12762 AT
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3391 2 +     13763 AT
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     2191 1 -     30804 A-
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Sorex_araneus.JH798187.1                                13652368 2 -  18376816 at
i Sorex_araneus.JH798187.1                               C 0 I 2
s Spermophilus_dauricus.KZ294078.1                         1955528 2 -   3870691 at
i Spermophilus_dauricus.KZ294078.1                       C 0 I 4
s Spilogale_gracilis.SpiGra_flattened_line_13525             32436 2 +     97271 ta
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 2
s Suricata_suricatta.SurSur_flattened_line_6629              19711 2 -    196729 AT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 2
s Sus_scrofa.CM000828.4                                    6813069 2 +  69701581 AT
i Sus_scrofa.CM000828.4                                  C 0 I 3
s Tadarida_brasiliensis.TadBra_scaffold_25820                12589 2 +     41958 AC
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 2
s Tarsius_lariang.k141_2201908                               27176 2 +     70052 AT
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1973 2 -     16117 AT
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186431875 2 + 186847797 at
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106785 2 +    114563 CT
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 2
s Tonatia_saurophila.TonSau_scaffold_294                     82614 2 +    610378 AC
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 2
s Trachypithecus_auratus.k141_722599                         14285 2 -     20410 AT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3408 2 -     12674 AT
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14393 2 +     19930 AT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      10795 2 -     19997 AT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            50937 2 -     60166 AT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18399 2 -     27529 AT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                         30 2 +      9229 AT
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          11933 2 -     21137 AT
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                      33 2 +      9131 AT
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28265 2 +     32220 AT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942362 2 +   6242583 AT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11615 2 +     20839 AT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    1219 2 +     27266 AT
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 I 38
s Tupaia_chinensis.KB320699.1                              2157537 2 +   4065304 at
i Tupaia_chinensis.KB320699.1                            C 0 I 2
s Tursiops_truncatus.MRVK01000835.1                       15739301 2 +  33153633 gt
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 2
s Uropsilus_gracilis.UroGra_scaffold_12083                   54654 2 -     77625 AT
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 2
s Ursus_maritimus.KK499267.1                               4851821 2 -   5085361 ta
i Ursus_maritimus.KK499267.1                             C 0 I 2
s Vicugna_pacos.KN270157.1                                 5373351 2 -   5488506 GT
i Vicugna_pacos.KN270157.1                               C 0 I 2
s Vulpes_lagopus.VulLag_flattened_line_30954                 12211 2 -     43706 AT
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 2
s Xerus_inauris.XerIna_scaffold_2302                          2524 2 +    224448 AT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 5
s Zapus_hudsonius.ZapHud_scaffold_11398                      16213 2 +     63895 AT
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 3
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202 0 +      8798 C
e Galago_senegalensis.k141_631886                             7400 0 +     11339 C
e Galago_moholi.ctg2040                                     429710 0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964 2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445 0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734 0 -     33856 C
e Perodicticus_potto.k141_1186926                              597 0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219 0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   7643 0 +      8208 C
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73921 0 +    116680 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Rhinolophus_sinicus.LVEH01000134.1                        368295 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53571770 803 +  90668790 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odocoileus_virginianus.KZ100018.1                         145852 291 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869 0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414 0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947 0 - 196305487 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190536 0 +    196477 C
e Myotis_brandtii.KE162005.1                                280096 2104 -  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398 7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Megaderma_lyra.MegLyr_scaffold_4542                        14651 0 -    207569 C
e Manis_pentadactyla.KN006162.1                              51623 129 -    317179 I
e Manis_javanica.JSZB01003497.1                              19605 129 +    737560 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  46419 1 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_101188                404 0 +      9903 C
e Hipposideros_armiger.JXIK01000431.1                       111834 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Glis_glis.GliGli_scaffold_19807                            32299 2 +     49224 I
e Galagoides_demidoff.k141_1711393                            4689 0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2147983 500 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64769 0 +   2246927 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11668671 0 + 224834208 C
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           1799 0 +     23735 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1750 0 -      8501 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538 0 +      5281 C

a score=0.000000
s hg38.chrUn_KI270753v1                                      10130  9 +     62944 TT---G----T-----A-T----GT-----------A
s Acinonyx_jubatus.LLWD01001279.1                           828683 16 -   1699592 tt---a----t-----a-tgtctat-t--ac-----a
i Acinonyx_jubatus.LLWD01001279.1                        I 2 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     72645  8 +     87051 -T---C----T-----A-T----TT-----------A
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9512022  8 -  29979442 gt---t----g-----a-a----aa------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 2 I 7
s Ailurus_fulgens.LNAC01001112.1                             81180  8 -    347723 GT---A----C-----A-A----AA------------
i Ailurus_fulgens.LNAC01001112.1                         I 2 I 7
s Allactaga_bullata.AllBul_scaffold_9566                     75749  1 -     89534 T------------------------------------
i Allactaga_bullata.AllBul_scaffold_9566                 I 3 C 0
s Allenopithecus_nigroviridis.k141_3361533                   17993  9 -     52922 TT---G----T-----A-T----GT-----------C
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         17930  9 -     28001 tt---g----t-----a-t----gt-----------c
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8425  9 -     18505 tt---g----t-----a-t----gt-----------c
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9278  9 -     12518 TT---G----T-----A-T----GT-----------C
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              9741  9 +     51355 tt---g----t-----g-t----gt-----------a
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                2846  9 -     36483 tt---g----t-----g-t----gt-----------a
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13301  9 +     28687 tt---g----t-----g-t----gt-----------a
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 1771  9 +     27940 tt---g----t-----g-t----gt-----------a
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            2850  9 -      9457 tt---g----t-----g-t----gt-----------a
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             1808  9 +     30492 tt---g----t-----g-t----gt-----------a
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              5801  9 +     47717 tt---g----t-----g-t----gt-----------a
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              2538  9 +      5663 tt---g----t-----g-t----gt-----------a
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             16990  9 +     50774 tt---g----t-----g-t----gt-----------a
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          677132  6 -   2318259 tt---a----t-----a-t------------------
i Ammotragus_lervia.NIVO01071767.1                       I 2 I 8
s Anoura_caudifer.AnoCau_scaffold_1412                      186777 18 +    412891 TT---A----T-----A-T----AT--GTATACAaca
i Anoura_caudifer.AnoCau_scaffold_1412                   I 2 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             99609 11 -    100397 TT---A----T-----A-T----T---------TATA
i Antilocapra_americana.AntAmePen_scaffold_12469         I 2 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      14052 13 +     20879 TT---ATAAAC-----A-T----TT-----------A
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 11 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6183 18 +     43469 TT---A----T-----A-A----AT-GTGTATt-aca
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 2 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21210002  9 -  21539123 tt---g----t-----g-t----gt-----------a
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               44798  9 -     48001 tt---g----t-----g-t----gt-----------a
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 27602  9 -     30947 TT---G----T-----G-T----GT-----------A
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9374  9 -     89868 tt---g----t-----g-t----gt-----------a
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              13758  9 -     40414 TT---G----T-----G-T----GT-----------A
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                21647  9 +     72325 tt---g----t-----g-t----gt-----------a
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193169 11 +  23207421 tt---a----t-----a-t----t--t-t---t---a
i Balaenoptera_acutorostrata.KI537508.1                  I 2 I 117
s Balaenoptera_bonaerensis.DF707048.1                         3634 11 -     18090 tt---a----t-----a-t----t--t-t---t---a
i Balaenoptera_bonaerensis.DF707048.1                    I 2 I 117
s Beatragus_hunteri.BeaHun_scaffold_50177                    28219  6 +     34529 TT---A----T-----A-T------------------
i Beatragus_hunteri.BeaHun_scaffold_50177                I 2 I 8
s Bison_bison.KN261452.1                                    201778  8 -    288883 TT---T----T--TATG--------------------
i Bison_bison.KN261452.1                                 I 2 I 1
s Bos_indicus.CM003047.1                                  20274961  8 +  48749331 TT---T----T--TATG--------------------
i Bos_indicus.CM003047.1                                 I 2 I 1
s Bos_mutus.JH880303.1                                     1127513  8 -   1948126 TT---T----T--TATG--------------------
i Bos_mutus.JH880303.1                                   I 2 I 1
s Bos_taurus.CM000203.6                                   18085599  8 +  45695690 TT---T----T--TATG--------------------
i Bos_taurus.CM000203.6                                  I 2 I 1
s Bubalus_bubalis.KI419123.1                               2821554 10 +   4408762 tt---a----tatttgt--------------------
i Bubalus_bubalis.KI419123.1                             I 2 I 1
s Cacajao_ayresi.k141_552049                                102624  8 -    122966 TT---G----T-----G-T----GT------------
i Cacajao_ayresi.k141_552049                             C 0 I 1
s Cacajao_calvus.k141_5142                                   62129  8 +     81800 TT---G----T-----G-T----GT------------
i Cacajao_calvus.k141_5142                               C 0 I 1
s Cacajao_hosomi.k141_81245                                  31309  8 -     95584 TT---G----T-----G-T----GT------------
i Cacajao_hosomi.k141_81245                              C 0 I 1
s Cacajao_melanocephalus.k141_619699                         55410  8 -    119600 tt---g----t-----g-t----gt------------
i Cacajao_melanocephalus.k141_619699                     C 0 I 1
s Camelus_bactrianus.KN276810.1                           10003834  9 -  17673402 TC---A----A-----GGC----AC------------
i Camelus_bactrianus.KN276810.1                          I 2 I 1
s Camelus_dromedarius.KN272107.1                           2336306  9 -   7040546 AC---A----A-----GGC----AC------------
i Camelus_dromedarius.KN272107.1                         I 2 I 1
s Camelus_ferus.KB017975.1                                  404604  9 -   1652518 TC---A----A-----GGC----AC------------
i Camelus_ferus.KB017975.1                               I 2 I 1
s CanFam4.chr16                                           17800597  8 -  60362399 TT---A----T-----A-T----AT------------
i CanFam4.chr16                                          I 2 I 7
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     1345  8 -     43241 TT---A----T-----A-T----AT------------
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 2 I 7
s Canis_lupus_dingo.QKWQ01000480.1                         9036040  8 -   9314153 tt---a----t-----a-t----at------------
i Canis_lupus_dingo.QKWQ01000480.1                       I 2 I 7
s Canis_lupus_familiaris.chr16                            17960516  8 -  59632846 tt---a----t-----a-t----at------------
i Canis_lupus_familiaris.chr16                           I 2 I 7
s Canis_lupus_orion.HG994398.1                            18501813  8 +  63665305 tt---a----t-----a-t----at------------
i Canis_lupus_orion.HG994398.1                           I 2 I 7
s Capra_aegagrus.CM003241.1                               18831243  6 +  46296322 tt---a----t-----a-t------------------
i Capra_aegagrus.CM003241.1                              I 2 I 8
s Capra_hircus.CM004588.1                                 18061963  6 -  44709034 tt---a----t-----a-t------------------
i Capra_hircus.CM004588.1                                I 2 I 8
s Capromys_pilorides.CapPil_scaffold_65020                    2350  9 -     12242 TT---A----T-----A-C----TT-----------C
i Capromys_pilorides.CapPil_scaffold_65020               I 13 C 0
s Carlito_syrichta.NW_007259797.1                           156685 10 -    496798 ct---a----t-----att----tt-----------a
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6525 18 -     11696 TT---A----T-----A-G----AC--GTGTATTGCa
i Carollia_perspicillata.CarPer_scaffold_92756           I 2 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138654  9 +    179628 AT---A----C-----A-T----TT-----------A
i Castor_canadensis.CasCan_scaffold_2074                 I 2 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     95493  8 +    217609 TA---A----G-----A-T----AT------------
i Catagonus_wagneri.CatWag_scaffold_2839                 I 3 C 0
s Cavia_aperea.AVPZ01000300.1                             18350837  9 -  23392119 tt---a----t-----a-c----tt-----------c
i Cavia_aperea.AVPZ01000300.1                            I 13 C 0
s Cavia_porcellus.DS562891.1                              18363100  9 -  23407841 TT---A----T-----A-C----TT-----------C
i Cavia_porcellus.DS562891.1                             I 13 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                       101982  9 +    143979 TT---A----T-----A-C----TT-----------C
i Cavia_tschudii.CavTsc_scaffold_8919                    I 13 C 0
s Cephalopachus_bancanus.k141_1423433                         6183 10 +     31688 CT---A----T-----ATT----TT-----------A
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4478956  9 +   4669795 tt---g----t-----a-t----gt-----------a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3450  9 +     17872 TT---G----T-----A-T----GT-----------A
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4045  9 -     14043 TT---G----T-----A-T----GT-----------A
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12140  9 +     27781 TT---G----T-----A-T----GT-----------A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12290  9 -     20310 TT---G----T-----A-T----GT-----------A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15270  9 +     29689 TT---G----T-----A-T----GT-----------A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10026  9 -     20078 TT---G----T-----A-T----GT-----------A
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          17941  9 -     27936 TT---G----T-----A-T----GT-----------A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            6808  9 -     17152 TT---G----T-----A-T----GT-----------A
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826540  9 +  39242232 TT---G----T-----A-T----GT-----------A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226044  9 -  21565898 TT---G----T-----A-T----GT-----------A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43163  9 -     53127 TT---G----T-----A-T----GT-----------A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3413  9 +     13442 TT---G----T-----A-T----GT-----------A
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       17959  9 -     27947 TT---G----T-----A-T----GT-----------A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                          988  9 +     10558 TT---G----T-----A-T----GT-----------A
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          3993  9 +     14005 TT---G----T-----A-T----GT-----------A
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1230  9 -     17098 TT---G----T-----G-T----GT-----------A
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1106  9 +     17877 TT---G----T-----G-T----GT-----------A
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            158673  9 -    216457 TT---G----T-----G-T----GT-----------A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63148  9 +     76511 TT---G----T-----G-T----GT-----------A
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254280  9 +   2543920 tt---a----c-----a-t----tt-----------c
i Chinchilla_lanigera.JH722012.1                         I 13 C 0
s Chiropotes_israelita.k141_747660                           99753  9 +    146308 TT---G----T-----G-T----GT-----------A
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          31561  9 -     50570 TT---G----T-----G-T----GT-----------A
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18431863  9 -  18827391 TT---G----T-----A-T----GT-----------C
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18360  9 -     50209 TT---G----T-----A-T----GT-----------C
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425364  9 + 135778131 tt---g----t-----a-t----gt-----------c
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1913865  9 +   2368649 tt---g----t-----a-t----gt-----------g
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952113  9 + 200372422 TT---G----T-----A-T----GT-----------A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40390  9 +     84244 TT---G----T-----A-T----GT-----------G
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549407 12 -  53390261 tc---a----a-----a-t----atgt-t-------a
i Condylura_cristata.JH655891.1                          I 2 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 51901  8 +     63868 -T---A----A-----A-C----TT-----------A
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               4150 12 -     19598 AT---A----G-----A-T----AT--------TTGA
i Crocidura_indochinensis.CroInd_scaffold_37019          I 2 I 14
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29882 16 -     87169 tt---c----t-----g-tatctat-t--ac-----a
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 2 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37310  9 +     51376 TT---A----C-----A-C----TT-----------C
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 13 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900             1254  9 -     75252 TT---A----T-----A-C----TT-----------C
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 13 C 0
s Delphinapterus_leucas.KZ290073.1                        16812802 11 +  35494412 tt---a----t-----a-t----t--t-t---t---a
i Delphinapterus_leucas.KZ290073.1                       I 2 I 115
s Desmodus_rotundus.KZ672289.1                             8631523 18 +  20541912 tt---c----t-----a-t----atgtgta-gt-aca
i Desmodus_rotundus.KZ672289.1                           I 2 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37766  9 +     67921 TT---A----C-----A-C----TT-----------C
i Dinomys_branickii.DinBra_scaffold_21862                I 11 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 34891  9 -     42551 TT---A----C-----A-C----TT-----------C
i Dolichotis_patagonum.DolPat_scaffold_30833             I 13 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       312291 11 +    607251 tt---a----t-----a-t----t--tgt-------a
i Elaphurus_davidianus.JRFZ01104969.1                    I 2 C 0
s Ellobius_lutescens.LOEQ01008920.1                          22410  8 -    110024 -t---a----t-----a-t----tt-----------a
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                            2330  8 +      8657 -t---a----t-----a-t----tt-----------a
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16331070  8 -  41312741 gt---a----g-----a-a----aa------------
i Enhydra_lutris.KZ291758.1                              I 2 I 7
s Erythrocebus_patas.Contig38                             21208536  9 -  21539334 TT---G----T-----A-T----GT-----------C
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12481 11 +    133382 TT---A----T-----A-T----T---------TTTA
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 2 I 118
s Eubalaena_japonica.EubJap_flattened_line_31514             26434 11 -     44125 TT---A----T-----A-T----T---------TTTA
i Eubalaena_japonica.EubJap_flattened_line_31514         I 2 I 118
s Felis_catus.CM001381.2                                  20238327 13 + 206538554 ----------t-----a-tgtctat-t--ac-----a
i Felis_catus.CM001381.2                                 I 3 C 0
s Felis_catus_fca126.CM031415.1                           20197170 13 + 205367284 ----------t-----a-tgtctat--------TACA
i Felis_catus_fca126.CM031415.1                          I 3 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 10924 13 -     36744 ----------t-----a-tgtctat-t--ac-----a
i Felis_nigripes.FelNig_flattened_line_20823             I 3 C 0
s Fukomys_damarensis.KN121974.1                             851779  9 +   3816255 tt---a----c-----a-t----tt-----------c
i Fukomys_damarensis.KN121974.1                          I 2 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               3737  9 -      9135 TT---A----C-----A-T----GT-----------A
i Galeopterus_variegatus.GalVar_scaffold_108840          I 2 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     610250 11 -    660261 tt---a----t-----a-t----t--tgt-------a
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 2 C 0
s Glis_glis.GliGli_scaffold_19807                            32301 13 +     49224 TT---GTATAC-----A-T----TT-----------A
i Glis_glis.GliGli_scaffold_19807                        I 2 C 0
s Gorilla_beringei.k141_3596273                              19375  9 -     32273 TT---G----T-----A-T----GT-----------A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341511  9 + 186649187 tt---g----t-----a-t----gt-----------a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33986 13 +     78134 TC---ATATAC-----A-T----TT-----------A
i Graphiurus_murinus.GraMur_scaffold_10447               I 2 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243720 16 +    327341 TT---C----T-----A-TGTCTAT--------TACA
i Helogale_parvula.HelPar_flattened_line_2585            I 2 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 19452  6 +     36099 TT---A----T-----A-T------------------
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 2 I 8
s Heterocephalus_glaber.JH602082.1                        20663567  9 +  22651954 tt---a----c-----a-t----tt-----------c
i Heterocephalus_glaber.JH602082.1                       I 2 C 0
s Hoolock_leuconedys.ctg274                                    438169  9 +    630532 TT---G----T-----A-T----GT-----------A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46420 11 +     55795 -T---A----T-----A-TGTCTAT------------
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 1 I 3
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23226  9 -    143317 TT---A----C-----A-C----TT-----------C
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 13 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84458  9 +    135385 TT---A----C-----A-T----TT-----------T
i Hystrix_cristata.HysCri_scaffold_5660                  I 2 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7522388 13 -   7955117 tt---ataaac-----a-g----CT-----------A
i Ictidomys_tridecemlineatus.JH393364.1                  I 4 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                  34 11 -     31341 TT---A----T-----A-T----T---------TTTA
i Inia_geoffrensis.IniGeo_flattened_line_34779           I 2 I 115
s Jaculus_jaculus.JH725527.1                               8278483  1 -   9596543 t------------------------------------
i Jaculus_jaculus.JH725527.1                             I 3 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                    8 11 -     18011 TT---A----T-----A-T----T---------TTTA
i Kogia_breviceps.KogBre_flattened_line_81059            I 2 I 115
s Lagothrix_lagothricha.k141_1005387                         15806  9 -     38430 TT---G----T-----G-T----GT-----------A
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    17769 18 -     42476 tt---a----t-----g-t----atgtgta--ttaca
i Lasiurus_borealis.LasBor_scaffold_32767                I 2 C 0
s Leptonychotes_weddellii.KB714746.1                       3044505  8 +   3914936 gt---a----g-----a-a----at------------
i Leptonychotes_weddellii.KB714746.1                     I 2 I 7
s Lepus_americanus.LepAme_scaffold_107385                     8311  5 -     14121 ----------------A-T----GT-----------A
i Lepus_americanus.LepAme_scaffold_107385                I 5 C 0
s Lipotes_vexillifer.KE559953.1                             269072 11 -    662738 tt---a----t-----a-t----t--t-t---t---a
i Lipotes_vexillifer.KE559953.1                          I 2 I 115
s Lophocebus_aterrimus.ctg367                              1440498  9 +   1826925 TT---G----T-----A-T----GT-----------A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17956756  8 -  59628241 tt---a----t-----a-t----at------------
i Lycaon_pictus.CM007581.1                               I 2 I 7
s Macaca_arctoides.k141_2326796                              10308  9 +     40492 TT---G----T-----A-T----GT-----------A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679562  9 +  60120075 TT---G----T-----A-T----GT-----------A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16079  9 -     26193 TT---G----T-----A-T----GT-----------A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            83855  9 -    114318 tt---g----t-----a-t----gt-----------a
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9546  9 -     23192 TT---G----T-----A-T----GT-----------A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19010  9 -     29190 TT---G----T-----A-T----GT-----------A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27588  9 +     37952 TT---G----T-----A-T----GT-----------A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842665  9 + 187317192 tt---g----t-----a-t----gt-----------a
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461243  9 -  25927173 tt---g----t-----a-t----gt-----------a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83444  9 +     89720 TT---G----T-----A-T----GT-----------A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10437  9 +     20474 TT---G----T-----A-T----GT-----------A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10234  9 -     14993 TT---G----T-----A-T----GT-----------A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333096  9 -    668171 TT---G----T-----A-T----GT-----------A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8546  9 -     24072 TT---G----T-----A-T----GT-----------A
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29177  9 -     45290 TT---G----T-----A-T----GT-----------A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92064 20 +     94391 TT---G----t-----a-t----atgtgtacattgta
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 2 C 0
s Mandrillus_leucophaeus.scaffold280                      23940765  9 -  24302211 TT---G----T-----A-T----GT-----------A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354881  9 +    752769 tt---g----t-----a-t----gt-----------a
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33104669 13 -  40650429 tt---ataaac-----a-t----tt-----------a
i Marmota_marmota.CZRN01000018.1                         I 4 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             11789  8 +     13704 GT---A----T-----A-A----AA------------
i Mellivora_capensis.MelCap_flattened_line_69365         I 2 I 7
s Meriones_unguiculatus.MerUng_scaffold_7390                 34653  8 +    140813 -T---C----T-----A-T----TT-----------A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12184110  8 -  29670104 -t---a----t-----a-g----tc-----------a
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    4700  1 +     10310 ------------------------------------A
i Mesoplodon_bidens.MesBid_scaffold_108144               I 12 I 115
s Micronycteris_hirsuta.MicHir_scaffold_52381                17274 18 -     19307 TT---A----T-----A-T----AT--GTGTCCTaca
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 2 C 0
s Microtus_ochrogaster.CM001695.1                         11262393  8 -  27267610 -t---a----t-----a-t----tt-----------a
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1851682  5 +   8254450 at---a----t-----a--------------------
i Miniopterus_natalensis.LDJU01000034.1                  I 2 I 9
s Miniopterus_schreibersii.MinSch_scaffold_18080             35362 18 +     64694 AT---A----T-----A-T----GT--GTGTATTACA
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 2 C 0
s Miopithecus_ogouensis.k141_534055                          12441  9 -     28506 TT---G----T-----A-T----GT-----------C
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         7373  8 -      8324 gt---a----g-----a-a----at------------
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 2 I 7
s Monodon_monoceros.MonMon_M_scaffold_103                    28185 11 -    437263 TT---A----T-----A-T----T---------TTTA
i Monodon_monoceros.MonMon_M_scaffold_103                I 2 I 115
s Mormoops_blainvillei.MorMeg_scaffold_1417                 143070 18 -    366855 TT---C----T-----A-C----AT--ATGTATTACA
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 2 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   2314 11 +     82753 TT---A----T-----A-T----T---------TGTA
i Moschus_moschiferus.MosMos_scaffold_13123              I 2 C 0
s Murina_feae.MurFea_scaffold_85699                           8394 18 +     14753 TT---A----T-----G-T----AT--GTACATTACA
i Murina_feae.MurFea_scaffold_85699                      I 2 C 0
s Mus_caroli.LT608237.1                                   84363040  8 - 120012414 -t---a----t-----a-t----tt-----------a
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87652541  8 - 129401213 -T---A----t-----a-g----tt-----------a
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31357275  8 -  89631738 -t---a----t-----a-t----tt-----------a
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90755030  8 - 130317789 -t---a----t-----a-t----tt-----------a
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               303171  8 -  14710649 GT---A----G-----A-A----AA------------
i Mustela_putorius.JH418006.1                            I 2 I 7
s Myocastor_coypus.MyoCoy_scaffold_10123                     72532  9 -     80779 TT---A----T-----A-C----TT-----------C
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 13 C 0
s Myotis_davidii.KB100139.1                                1589447 18 -   6019432 tt---a----t-----g-t----atgtgta--ttaca
i Myotis_davidii.KB100139.1                              I 2 C 0
s Myotis_lucifugus.GL429869.1                              3905537 18 -   4330536 tt---a----t-----g-t----atgtgta--ttaca
i Myotis_lucifugus.GL429869.1                            I 2 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                        1691 18 +      1835 tt---a----t-----a-t----atgtgta--ttaca
i Myotis_myotis.MyoMyo_scaffold_281845                   I 2 C 0
s Nannospalax_galili.KL204047.1                            2036833 11 -   3037898 -ttttg----t-----a-t----tt-----------a
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               18491  9 +     21681 TT---G----T-----A-T----GT-----------A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308966  8 +  31847680 gt---a----g-----a-a----at------------
i Neomonachus_schauinslandi.NINY01007730.1               I 2 I 7
s Neophocaena_asiaeorientalis.KZ687982.1                   5867149 11 +   7148211 tt---a----t-----a-t----t--t-t---t---a
i Neophocaena_asiaeorientalis.KZ687982.1                 I 2 I 115
s Noctilio_leporinus.NocLep_scaffold_251                    759265 18 +    783361 TT---A----T-----A-T----AT--GTATAGTGCA
i Noctilio_leporinus.NocLep_scaffold_251                 I 2 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150825  8 -   9404916 tt---a----t-----a-t----at------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 2 I 1166
s Ochotona_princeps.JH802162.1                             1365714  5 +   3988456 ----------------a-t----ac-----------a
i Ochotona_princeps.JH802162.1                           I 5 C 0
s Odobenus_rosmarus.KB229312.1                              508108  8 -   2017862 gt---a----g-----a-a----at------------
i Odobenus_rosmarus.KB229312.1                           I 2 I 7
s Okapia_johnstoni.LVCL01S0005463.1                          78166 11 -    150152 tt---a----t-----a-t----t--tgt-------a
i Okapia_johnstoni.LVCL01S0005463.1                      I 2 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   27051  8 +     28053 -T---A----T-----A-T----TT-----------A
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    82054  8 +    102263 -T---A----T-----A-T----TT-----------A
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2783065  1 -  10937097 ------------------------------------a
i Orcinus_orca.KB316932.1                                I 4 I 110
s Oryctolagus_cuniculus.CM000791.1                        67149211  4 + 174332312 ----------------a-t----gt------------
i Oryctolagus_cuniculus.CM000791.1                       I 5 I 1
s Otocyon_megalotis.JAEUCK010005147.1                       463770  8 -    559221 tt---a----t-----a-t----at------------
i Otocyon_megalotis.JAEUCK010005147.1                    I 2 I 7
s Ovis_aries.CM001607.2                                   17587425  6 +  44047080 tt---a----t-----a-t------------------
i Ovis_aries.CM001607.2                                  I 2 I 1
s Ovis_canadensis.OviCan_scaffold_2572                      175417  6 -    191736 TT---A----T-----A-T------------------
i Ovis_canadensis.OviCan_scaffold_2572                   I 2 I 1
s Pan_paniscus.KQ411613.1                                    47476  9 +     80009 tt---g----t-----a-t----gt-----------a
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146343  9 + 189151597 tt---g----t-----a-t----gt-----------a
i Pan_troglodytes.CM009242.2                             C 0 I 13
s Panthera_onca.PanOnc_flattened_line_3271                  152532 16 +    230217 TT---A----T-----A-TGTCTAT--------TACA
i Panthera_onca.PanOnc_flattened_line_3271               I 2 C 0
s Panthera_pardus.KV860321.1                                265741 16 +  18783137 tt---a----t-----a-tgtctat-t--ac-----a
i Panthera_pardus.KV860321.1                             I 2 C 0
s Panthera_tigris.KE722367.1                               4722621 16 -   8748460 tt---a----t-----a-tgtctat--------TACA
i Panthera_tigris.KE722367.1                             I 2 C 0
s Pantholops_hodgsonii.KE114653.1                          1266322  6 -   2937107 tt---a----t-----a-t------------------
i Pantholops_hodgsonii.KE114653.1                        I 2 I 8
s Papio_anubis.CM001495.2                                183446571  9 + 183742232 tt---g----t-----a-t----gt-----------a
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10221  9 +     20448 TT---G----T-----A-T----GT-----------A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567029  9 +  20919399 tt---g----t-----a-t----gt-----------a
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   8961  9 +     41871 TT---G----T-----A-T----GT-----------A
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12254  9 +     27711 TT---G----T-----A-T----GT-----------A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3253  9 -     11374 TT---G----T-----A-T----GT-----------A
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14042 16 -     78924 GT---T----T-----A-TGTCTAT--------TACA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 2 C 0
s Peromyscus_maniculatus.KI615324.1                       18196681  8 -  18517816 -c---a----t-----a-t----tt-----------a
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_221660                        4  9 -      2102 TT---A----C-----A-T----TT-----------A
i Petromus_typicus.PetTyp_scaffold_221660                I 2 I 11
s Phocoena_phocoena.PhoPho_flattened_line_24159              10106 11 +     63832 TT---A----T-----A-T----T---------TTTA
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 2 I 115
s Piliocolobus_badius.k141_1142974                            1568  9 +     68526 TT---G----T-----A-T----GT-----------A
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        41714  9 +     89929 TT---G----T-----A-T----GT-----------A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43128  9 +     51399 TT---G----T-----A-T----GT-----------A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299365  9 -  14605196 tt---g----t-----a-t----gt-----------a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3148 18 +     22620 TT---A----T-----G-T----AT--GTGTATTACA
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 1 C 0
s Pithecia_albicans.k141_1476471                              5015  9 +     26961 TT---G----T-----G-T----GT-----------A
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1160  9 +     23417 TT---G----T-----G-T----GT-----------A
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                5007  9 +     29694 TT---G----T-----G-T----GT-----------A
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          30033  9 +     52772 TT---G----T-----G-T----GT-----------A
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           5029  9 +     26198 TT---G----T-----G-T----GT-----------A
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3941577  9 +   4542175 TT---G----T-----G-T----GT-----------A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            4993  9 -     23490 TT---G----T-----G-T----GT-----------A
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9249  9 -     39866 TT---G----T-----G-T----GT-----------A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18415  9 +     34906 TT---G----T-----G-T----GT-----------A
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       22677  9 +     87950 TT---G----T-----G-T----GT-----------A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23506  9 +     88961 TT---G----T-----G-T----GT-----------A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9177  9 +     39403 TT---G----T-----G-T----GT-----------A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          22958  9 -     87928 TT---G----T-----G-T----GT-----------A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         29917  9 +     60166 TT---G----T-----G-T----GT-----------A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30114  9 +     67232 TT---G----T-----G-T----GT-----------A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          25587  9 +     90634 TT---G----T-----G-T----GT-----------A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          22959  9 -     89403 TT---G----T-----G-T----GT-----------A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189134487  9 + 189387572 tt---g----t-----a-t----gt-----------a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9574096  9 +   9816681 tt---g----t-----a-t----gt-----------a
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76668  9 -     81375 TT---G----T-----A-T----GT-----------A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8485  9 +     19060 TT---G----T-----A-T----GT-----------A
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            12294  8 -     21651 -t---a----t-----a-t----tt-----------a
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            16559 14 -     21811 ----------------a-t----atgtgta--ttaca
i Pteronotus_parnellii.KE909381.1                        I 4 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41984  8 +     42204 GT---A----G-----A-A----AA------------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 2 I 7
s Pteropus_alecto.KB030862.1                              22978155 20 +  28871421 tt---g----t-----a-t----atgtgtatattaga
i Pteropus_alecto.KB030862.1                             I 2 C 0
s Puma_concolor.QAVW01001104.1                            20275690 16 -  38429054 tt---a----t-----a-tgtctat-t--ac-----a
i Puma_concolor.QAVW01001104.1                           I 2 C 0
s Pygathrix_cinerea.k141_1153803                             18477  9 -     91421 TT---A----T-----A-T----GT-----------A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612600  9 +   7812017 TT---A----T-----A-T----GT-----------A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18507  9 -     72585 TT---A----T-----A-T----GT-----------A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6922 11 +     55207 TT---A----T-----A-T----T---------TGTA
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 2 C 0
s Rhinopithecus_bieti.k119_217274                            10175  9 -     11128 TT---G----T-----A-T----GT-----------A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239543  9 - 195417433 tt---g----t-----a-t----gt-----------a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675190  9 +   7961872 TT---G----T-----A-T----GT-----------A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89245 20 -     96226 TT---G----T-----A-T----GTGTGTTTATtaga
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 2 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154546 12 -    313613 TC---A----A-----A-T----AT--------GTTA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 2 C 0
s Semnopithecus_entellus.k141_1672505                         3349  9 -     12572 TT---G----T-----A-T----GT-----------A
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30201  9 +     39453 TT---G----T-----A-T----GT-----------A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           10709  9 +     27826 TT---G----T-----A-T----GT-----------A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10250  9 -     19483 TT---G----T-----A-T----GT-----------A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3548  9 -     12762 TT---G----T-----A-T----GT-----------A
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3393  9 +     13763 TT---G----T-----A-T----GT-----------A
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     2192  8 -     30804 -T---A----T-----A-T----TT-----------A
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Sorex_araneus.JH798187.1                                13652372 12 -  18376816 gc---a----G-----G-T----GT--------TTGA
i Sorex_araneus.JH798187.1                               I 2 C 0
s Spermophilus_dauricus.KZ294078.1                         1955534 13 -   3870691 tt---ttaaac-----a-g----tT-----------A
i Spermophilus_dauricus.KZ294078.1                       I 4 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             32440  8 +     97271 gt---a----g-----a-a----aa------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 2 I 7
s Suricata_suricatta.SurSur_flattened_line_6629              19715 16 -    196729 GT---C----T-----A-TGTCTAT--------TACA
i Suricata_suricatta.SurSur_flattened_line_6629          I 2 C 0
s Sus_scrofa.CM000828.4                                    6813074  8 +  69701581 TA---A----G-----a-t----at------------
i Sus_scrofa.CM000828.4                                  I 3 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                12593 18 +     41958 TT---A----T-----A-T----AT--GTGTATTACA
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 2 C 0
s Tarsius_lariang.k141_2201908                               27178 10 +     70052 CT---A----T-----ATT----TT-----------A
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1975 10 -     16117 CT---A----T-----ATT----TT-----------A
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186431877  9 + 186847797 tt---g----t-----a-t----gt-----------a
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106789  9 +    114563 TA---A----C-----A-T----CT-----------A
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 2 I 9
s Tonatia_saurophila.TonSau_scaffold_294                     82618 18 +    610378 TT---A----T-----A-T----AT--GTGTAttaca
i Tonatia_saurophila.TonSau_scaffold_294                 I 2 C 0
s Trachypithecus_auratus.k141_722599                         14287  9 -     20410 TT---G----T-----A-T----GT-----------A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3410  9 -     12674 TT---G----T-----A-T----GT-----------A
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14395  9 +     19930 TT---G----T-----A-T----GT-----------A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      10797  9 -     19997 TT---G----T-----A-T----GT-----------A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            50939  9 -     60166 TT---G----T-----A-T----GT-----------A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18401  9 -     27529 TT---G----T-----A-T----GT-----------A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                         32  9 +      9229 TT---G----T-----A-T----GT-----------A
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          11935  9 -     21137 TT---G----T-----A-T----GT-----------A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                      35  9 +      9131 TT---G----T-----A-T----GT-----------A
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                            0  8 -      3730 -T---G----T-----A-T----GT-----------A
i Trachypithecus_melamera.k141_105182                    N 0 C 0
s Trachypithecus_obscurus.k141_190785                        28267  9 +     32220 TT---G----T-----A-T----GT-----------A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942364  9 +   6242583 TT---G----T-----A-T----GT-----------A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11617  9 +     20839 TT---G----T-----A-T----GT-----------A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    1259 11 +     27266 tt---g----t-----a-t----t-g-g-a------g
i Tragulus_javanicus.TraJav_scaffold_40725               I 38 C 0
s Tupaia_chinensis.KB320699.1                              2157541  9 +   4065304 tt---a----t-----a-t----ct-----------a
i Tupaia_chinensis.KB320699.1                            I 2 C 0
s Tursiops_truncatus.MRVK01000835.1                       15739305 11 +  33153633 tt---a----t-----a-t----t--t-t---t---a
i Tursiops_truncatus.MRVK01000835.1                      I 2 I 110
s Uropsilus_gracilis.UroGra_scaffold_12083                   54658 12 -     77625 TC---A----A-----A-T----GT--------TTTA
i Uropsilus_gracilis.UroGra_scaffold_12083               I 2 C 0
s Ursus_maritimus.KK499267.1                               4851825  8 -   5085361 gt---t----g-----a-a----aa------------
i Ursus_maritimus.KK499267.1                             I 2 I 7
s Vicugna_pacos.KN270157.1                                 5373355  9 -   5488506 TC---A----A-----GGC----AC------------
i Vicugna_pacos.KN270157.1                               I 2 I 1
s Vulpes_lagopus.VulLag_flattened_line_30954                 12215  8 -     43706 GT---A----T-----A-T----AT------------
i Vulpes_lagopus.VulLag_flattened_line_30954             I 2 I 7
s Xerus_inauris.XerIna_scaffold_2302                          2531  6 +    224448 ----------C-----A-T----TT-----------A
i Xerus_inauris.XerIna_scaffold_2302                     I 5 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      16218  1 +     63895 T------------------------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 3 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   7643  0 +      8208 C
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73921  0 +    116680 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Rhinolophus_sinicus.LVEH01000134.1                        368295  0 -   3329780 C
e Rattus_norvegicus.chr16                                 53571770 803 +  90668790 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odocoileus_virginianus.KZ100018.1                         145852 291 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190536  0 +    196477 C
e Myotis_brandtii.KE162005.1                                280096 2104 -  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Megaderma_lyra.MegLyr_scaffold_4542                        14651  0 -    207569 C
e Manis_pentadactyla.KN006162.1                              51623 129 -    317179 I
e Manis_javanica.JSZB01003497.1                              19605 129 +    737560 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hipposideros_galeritus.HipGal_scaffold_101188                404  0 +      9903 C
e Hipposideros_armiger.JXIK01000431.1                       111834  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2147983 500 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64769  0 +   2246927 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           1799  0 +     23735 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1750  0 -      8501 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C

a score=0.000000
s hg38.chrUn_KI270753v1                                      10139 14 +     62944 T-------A------------------TATACACAAATG
s Acinonyx_jubatus.LLWD01001279.1                           828699  4 -   1699592 c-------a------------------ta----------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     72653 10 +     87051 T-------A------------CATGTGTA----------
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9512037  1 -  29979442 ----------------------------g----------
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 7 C 0
s Ailurus_fulgens.LNAC01001112.1                             81195  1 -    347723 ----------------------------G----------
i Ailurus_fulgens.LNAC01001112.1                         I 7 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     75750  3 -     89534 --------C------------------TA----------
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   18002 14 -     52922 T-------A------------------TATACACAAATG
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         17939 14 -     28001 t-------a------------------tatacacaaatg
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8434 14 -     18505 t-------a------------------tatacacaaatg
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9287 14 -     12518 T-------A------------------TATACACAAATG
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              9750 14 +     51355 t-------a------------------tacacacaaatg
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                2855 14 -     36483 t-------a------------------tacacagaaatg
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13310 14 +     28687 t-------a------------------tacacagaaatg
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 1780 14 +     27940 t-------a------------------tacacagaaatg
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            2859 14 -      9457 t-------a------------------tacacacaaatg
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             1817 14 +     30492 t-------a------------------tacacacaaatg
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              5810 14 +     47717 t-------a------------------tacacacaaatg
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              2547 14 +      5663 t-------a------------------tacacagaaatg
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             16999 14 +     50774 t-------a------------------tacacagaaatg
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          677146  1 -   2318259 ----------------------------a----------
i Ammotragus_lervia.NIVO01071767.1                       I 8 I 105
s Anoura_caudifer.AnoCau_scaffold_1412                      186795  4 +    412891 c-------a------------------ta----------
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             99620  4 -    100397 T-------A------------------TA----------
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 I 101
s Aplodontia_rufa.AprRuf_scaffold_68852                      14065  4 +     20879 C-------A------------------TA----------
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6201  4 +     43469 t-------a------------------ca----------
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21210011 14 -  21539123 t-------a------------------tatacacaaatg
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               44807 14 -     48001 t-------a------------------tgtacacaaatg
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 27611 14 -     30947 T-------A------------------CGTACACAAATG
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9383 14 -     89868 t-------a------------------tgtacacaaatg
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              13767 14 -     40414 T-------A------------------CGTACACAAATG
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                21656 14 +     72325 t-------a------------------tttacacaaatg
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193297  4 +  23207421 t-------g------------------ta----------
i Balaenoptera_acutorostrata.KI537508.1                  I 117 C 0
s Balaenoptera_bonaerensis.DF707048.1                         3762  4 -     18090 t-------g------------------ta----------
i Balaenoptera_bonaerensis.DF707048.1                    I 117 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    28233  1 +     34529 ----------------------------A----------
i Beatragus_hunteri.BeaHun_scaffold_50177                I 8 I 103
s Bison_bison.KN261452.1                                    201787  4 -    288883 T-------A------------------TA----------
i Bison_bison.KN261452.1                                 I 1 I 413
s Bos_indicus.CM003047.1                                  20274970  4 +  48749331 T-------A------------------TA----------
i Bos_indicus.CM003047.1                                 I 1 I 470
s Bos_mutus.JH880303.1                                     1127522  4 -   1948126 T-------A------------------TA----------
i Bos_mutus.JH880303.1                                   I 1 I 470
s Bos_taurus.CM000203.6                                   18085608  4 +  45695690 T-------A------------------TA----------
i Bos_taurus.CM000203.6                                  I 1 I 470
s Bubalus_bubalis.KI419123.1                               2821565  4 +   4408762 t-------a------------------ta----------
i Bubalus_bubalis.KI419123.1                             I 1 I 471
s Cacajao_ayresi.k141_552049                                102633 14 -    122966 T-------A------------------TATACACAAATG
i Cacajao_ayresi.k141_552049                             I 1 C 0
s Cacajao_calvus.k141_5142                                   62138 14 +     81800 T-------A------------------TATACACAAATG
i Cacajao_calvus.k141_5142                               I 1 C 0
s Cacajao_hosomi.k141_81245                                  31318 14 -     95584 T-------A------------------TATACACAAATG
i Cacajao_hosomi.k141_81245                              I 1 C 0
s Cacajao_melanocephalus.k141_619699                         55419 14 -    119600 t-------a------------------tatacacaaatg
i Cacajao_melanocephalus.k141_619699                     I 1 C 0
s Camelus_bactrianus.KN276810.1                           10003844  3 -  17673402 --------G------------------CA----------
i Camelus_bactrianus.KN276810.1                          I 1 C 0
s Camelus_dromedarius.KN272107.1                           2336316  3 -   7040546 --------G------------------CA----------
i Camelus_dromedarius.KN272107.1                         I 1 C 0
s Camelus_ferus.KB017975.1                                  404614  3 -   1652518 --------G------------------CA----------
i Camelus_ferus.KB017975.1                               I 1 C 0
s CanFam4.chr16                                           17800612  1 -  60362399 ----------------------------A----------
i CanFam4.chr16                                          I 7 I 1303
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     1360  1 -     43241 ----------------------------A----------
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 7 I 1296
s Canis_lupus_dingo.QKWQ01000480.1                         9036055  1 -   9314153 ----------------------------a----------
i Canis_lupus_dingo.QKWQ01000480.1                       I 7 I 1303
s Canis_lupus_familiaris.chr16                            17960531  1 -  59632846 ----------------------------a----------
i Canis_lupus_familiaris.chr16                           I 7 I 1296
s Canis_lupus_orion.HG994398.1                            18501828  1 +  63665305 ----------------------------a----------
i Canis_lupus_orion.HG994398.1                           I 7 I 1301
s Capra_aegagrus.CM003241.1                               18831257  1 +  46296322 ----------------------------a----------
i Capra_aegagrus.CM003241.1                              I 8 I 100
s Capra_hircus.CM004588.1                                 18061977  1 -  44709034 ----------------------------a----------
i Capra_hircus.CM004588.1                                I 8 I 100
s Capromys_pilorides.CapPil_scaffold_65020                    2359 13 -     12242 T-------A---------TATAATTAATA----------
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           156695  4 -    496798 t-------a------------------ta----------
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6543  4 -     11696 c-------a------------------ca----------
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138663  4 +    179628 C-------A------------------TA----------
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     95501  4 +    217609 C-------A------------------TA----------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18350846 13 -  23392119 t-------a--ta--t-a---attt-aga----------
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18363109 13 -  23407841 T-------A---------TATAATTTAGA----------
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                       101991 13 +    143979 T-------A---------TATAATTTAGA----------
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         6193  4 +     31688 T-------A------------------TA----------
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4478965 14 +   4669795 t-------a------------------tatacacaaatg
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3459 14 +     17872 T-------A------------------TATACACAAATG
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4054 14 -     14043 T-------A------------------TATACACAAATG
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12149 14 +     27781 T-------A------------------TATACACAAATG
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12299 14 -     20310 T-------A------------------TATACACAAATG
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15279 14 +     29689 T-------A------------------TATACACAAATG
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10035 14 -     20078 T-------A------------------TATACACAAATG
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          17950 14 -     27936 T-------A------------------TATACACAAATG
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            6817 14 -     17152 T-------A------------------TATACACAAATG
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826549 14 +  39242232 T-------A------------------TATACACAAATG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226053 14 -  21565898 T-------A------------------TATACACAAATG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43172 14 -     53127 T-------A------------------TATACACAAATG
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3422 14 +     13442 T-------A------------------TATACACAAATG
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       17968 14 -     27947 T-------A------------------TATACACAAATG
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                          997 14 +     10558 T-------A------------------TATACACAAATG
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4002 14 +     14005 T-------A------------------TATACACAAATG
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1239 14 -     17098 C-------A------------------TATACACAAATG
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1115 14 +     17877 C-------A------------------TATACACAAATG
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            158682 14 -    216457 C-------A------------------TATACACAAATG
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63157 14 +     76511 C-------A------------------TATACACAAATG
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254289 13 +   2543920 t-------atataa---at-ta-----ta----------
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_israelita.k141_747660                           99762 14 +    146308 T-------A------------------TATACACAAATG
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          31570 14 -     50570 T-------A------------------GATACACAAATG
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18431872 14 -  18827391 T-------A------------------TATACACAAATG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18369 14 -     50209 T-------A------------------TATACACAAATG
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425373 14 + 135778131 t-------a------------------tatacacaaatg
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1913874 14 +   2368649 t-------a------------------tgtacacaaatg
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952122 14 + 200372422 T-------A------------------TGTACACAAATG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40399 14 +     84244 T-------A------------------TGTACACAAATG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549419  4 -  53390261 g-------c------------------ta----------
i Condylura_cristata.JH655891.1                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 51909  8 +     63868 T-------A--------------TGTATA----------
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_239572              3166  4 -      5012 T-------A------------------TA----------
i Crocidura_indochinensis.CroInd_scaffold_239572         I 930 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29898  4 -     87169 c-------a------------------ta----------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37319 13 +     51376 T-------A---------TATAATTTATA----------
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900             1263 13 -     75252 T-------G---------TATAATTTATA----------
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 14
s Delphinapterus_leucas.KZ290073.1                        16812928  4 +  35494412 t-------g------------------ta----------
i Delphinapterus_leucas.KZ290073.1                       I 115 C 0
s Desmodus_rotundus.KZ672289.1                             8631541  4 +  20541912 c-------a------------------ta----------
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37775 13 +     67921 T-------A---------TAAAATTTATA----------
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 34900 13 -     42551 T-------A---------TATAATTTATA----------
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       312302  4 +    607251 t-------a------------------ta----------
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 820
s Ellobius_lutescens.LOEQ01008920.1                          22418  8 -    110024 t-------acat--------------gta----------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                            2338  8 +      8657 t-------acat--------------gta----------
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16331085  1 -  41312741 ----------------------------G----------
i Enhydra_lutris.KZ291758.1                              I 7 C 0
s Erythrocebus_patas.Contig38                             21208545 14 -  21539334 T-------A------------------TATACACAAATG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12610  4 +    133382 T-------G------------------TA----------
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 118 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             26563  4 -     44125 T-------G------------------TA----------
i Eubalaena_japonica.EubJap_flattened_line_31514         I 118 C 0
s Felis_catus.CM001381.2                                  20238340  4 + 206538554 c-------a------------------ta----------
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20197183  4 + 205367284 C-------A------------------TA----------
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 10937  4 -     36744 c-------a------------------ta----------
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             851788 20 +   3816255 t-------atataacatat--actttata----------
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               3746  4 -      9135 T-------A------------------TA----------
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     610261  4 -    660261 t-------a------------------ta----------
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 I 103
s Glis_glis.GliGli_scaffold_19807                            32314  4 +     49224 C-------A------------------TA----------
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              19384 14 -     32273 T-------A------------------TATACACAAATG
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341520 14 + 186649187 t-------a------------------tatacacaaatg
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   33999  4 +     78134 T-------A------------------TA----------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243736  4 +    327341 C-------A------------------TA----------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 19466  1 +     36099 ----------------------------A----------
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 8 I 107
s Heterocephalus_glaber.JH602082.1                        20663576 22 +  22651954 t-------acataacttatctattttata----------
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hoolock_leuconedys.ctg274                                    438178 14 +    630532 T-------A------------------TATACAAAAATG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46434  3 +     55795 --------A------------------TA----------
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 3 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23235 13 -    143317 T-------A---------CATAATTTATG----------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84467 13 +    135385 T-------A---------TATAATTCATA----------
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7522401  4 -   7955117 T-------G------------------TG----------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                 160  4 -     31341 T-------G------------------TA----------
i Inia_geoffrensis.IniGeo_flattened_line_34779           I 115 C 0
s Jaculus_jaculus.JH725527.1                               8278484  3 -   9596543 --------a------------------ca----------
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                  134  4 -     18011 T-------G------------------TA----------
i Kogia_breviceps.KogBre_flattened_line_81059            I 115 C 0
s Lagothrix_lagothricha.k141_1005387                         15815 14 -     38430 T-------A------------------TATACACAAATG
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    17787  4 -     42476 t-------t------------------ca----------
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3044520  1 +   3914936 ----------------------------g----------
i Leptonychotes_weddellii.KB714746.1                     I 7 C 0
s Lepus_americanus.LepAme_scaffold_107385                     8316  4 -     14121 T-------T------------------TA----------
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             269198  4 -    662738 t-------g------------------ta----------
i Lipotes_vexillifer.KE559953.1                          I 115 C 0
s Lophocebus_aterrimus.ctg367                              1440507 14 +   1826925 T-------A------------------TATACACAAATG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17956771  1 -  59628241 ----------------------------a----------
i Lycaon_pictus.CM007581.1                               I 7 I 1296
s Macaca_arctoides.k141_2326796                              10317 14 +     40492 T-------A------------------TATACACAAATG
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679571 14 +  60120075 T-------A------------------TATACACAAATG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16088 14 -     26193 T-------A------------------TATACACAAATG
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            83864 14 -    114318 t-------a------------------tatacacaaatg
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9555 14 -     23192 T-------A------------------TATACACAAATG
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19019 14 -     29190 T-------A------------------TATACACAAATG
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27597 14 +     37952 T-------A------------------TATACACAAATG
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842674 14 + 187317192 t-------a------------------tatacacaaatg
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461252 14 -  25927173 t-------a------------------tatacacaaatg
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83453 14 +     89720 T-------A------------------TATACACAAATG
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10446 14 +     20474 T-------A------------------TATACACAAATG
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10243 14 -     14993 T-------A------------------TATACACAAATG
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333105 14 -    668171 T-------A------------------TATACACAAATG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8555 14 -     24072 T-------A------------------TATACACAAATG
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29186 14 -     45290 T-------A------------------TATACACAAATG
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92084  4 +     94391 t-------a------------------ta----------
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23940774 14 -  24302211 T-------A------------------TATACACAAATG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354890 14 +    752769 t-------a------------------tatacacaaatg
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33104682  4 -  40650429 c-------a------------------tg----------
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             11804  1 +     13704 ----------------------------G----------
i Mellivora_capensis.MelCap_flattened_line_69365         I 7 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 34661 10 +    140813 T-------A------------CATGTGTA----------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12184118  8 -  29670104 t-------acat--------------gaa----------
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    4816  4 +     10310 T-------G------------------TA----------
i Mesoplodon_bidens.MesBid_scaffold_108144               I 115 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                17292  4 -     19307 c-------a------------------ta----------
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11262401  8 -  27267610 t-------acat--------------gta----------
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1851696  4 +   8254450 t-------a------------------ta----------
i Miniopterus_natalensis.LDJU01000034.1                  I 9 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             35380  4 +     64694 T-------A------------------TA----------
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                          12450 14 -     28506 T-------A------------------TATACACAAATG
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         7388  1 -      8324 ----------------------------g----------
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 7 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    28311  4 -    437263 T-------G------------------TA----------
i Monodon_monoceros.MonMon_M_scaffold_103                I 115 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 143088  4 -    366855 T-------A------------------TA----------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   2325  4 +     82753 T-------A------------------TA----------
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 82
s Murina_feae.MurFea_scaffold_85699                           8412  4 +     14753 T-------A------------------CA----------
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84363048 10 - 120012414 t-------a--t--gt-gt-------gta----------
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87652549 10 - 129401213 t-------a--t--gt-gt-------gta----------
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31357283 10 -  89631738 t-------a--ta--t-gt-------gta----------
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90755038 10 - 130317789 t-------a--t--gt-gt-------gtg----------
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               303186  1 -  14710649 ----------------------------G----------
i Mustela_putorius.JH418006.1                            I 7 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     72541 13 -     80779 T-------A---------TATAATTAATA----------
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_davidii.KB100139.1                                1589465  4 -   6019432 t-------a------------------ca----------
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3905555  4 -   4330536 t-------a------------------ca----------
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                        1709  4 +      1835 t-------a------------------ca----------
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 C 0
s Nannospalax_galili.KL204047.1                            2036844  4 -   3037898 t-------a------------------ga----------
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               18500 14 +     21681 T-------A------------------TATACACAAATG
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308981  1 +  31847680 ----------------------------g----------
i Neomonachus_schauinslandi.NINY01007730.1               I 7 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5867275  4 +   7148211 t-------g------------------ta----------
i Neophocaena_asiaeorientalis.KZ687982.1                 I 115 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    759283  4 +    783361 T-------A------------------TA----------
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9151999  1 -   9404916 ----------------------------g----------
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 1166 C 0
s Ochotona_princeps.JH802162.1                             1365719  4 +   3988456 t-------t------------------ta----------
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              508123  1 -   2017862 ----------------------------g----------
i Odobenus_rosmarus.KB229312.1                           I 7 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          78177  4 -    150152 a-------a------------------ta----------
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 99
s Ondatra_zibethicus.OndZib_scaffold_46174                   27059  8 +     28053 T-------A--------------CATGTA----------
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    82062  8 +    102263 T-------A--------------CATATA----------
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2783176  4 -  10937097 t-------g------------------ta----------
i Orcinus_orca.KB316932.1                                I 110 C 0
s Oryctolagus_cuniculus.CM000791.1                        67149216  4 + 174332312 t-------t------------------ta----------
i Oryctolagus_cuniculus.CM000791.1                       I 1 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       463785  1 -    559221 ----------------------------a----------
i Otocyon_megalotis.JAEUCK010005147.1                    I 7 C 0
s Ovis_aries.CM001607.2                                   17587432  1 +  44047080 ----------------------------a----------
i Ovis_aries.CM001607.2                                  I 1 I 103
s Ovis_canadensis.OviCan_scaffold_2572                      175424  1 -    191736 ----------------------------A----------
i Ovis_canadensis.OviCan_scaffold_2572                   I 1 I 103
s Pan_paniscus.KQ411613.1                                    47485 14 +     80009 t-------a------------------tatacacaaatg
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03001836.1                             33399 14 +     51860 t-------a------------------tatacacaaatg
i Pan_troglodytes.NBAG03001836.1                         I 629 I 48
s Panthera_onca.PanOnc_flattened_line_3271                  152548  4 +    230217 C-------A------------------TA----------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                265757  4 +  18783137 c-------a------------------ta----------
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4722637  4 -   8748460 C-------A------------------TA----------
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1266336  1 -   2937107 ----------------------------a----------
i Pantholops_hodgsonii.KE114653.1                        I 8 I 102
s Papio_anubis.CM001495.2                                183446580 14 + 183742232 t-------a------------------tatacacaaatg
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10230 14 +     20448 T-------A------------------TATACACAAATG
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567038 14 +  20919399 t-------a------------------tatacacaaatg
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   8970 14 +     41871 T-------A------------------TATACACAAATG
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12263 14 +     27711 T-------A------------------TATACACAAATG
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3262 14 -     11374 T-------A------------------TATACACAAATG
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14058  4 -     78924 C-------A------------------TA----------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18196689 15 -  18517816 tacattatacata--------------ta----------
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_221660                       24  2 -      2102 ---------------------------TG----------
i Petromus_typicus.PetTyp_scaffold_221660                I 11 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              10232  4 +     63832 T-------G------------------TA----------
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 115 C 0
s Piliocolobus_badius.k141_1142974                            1577 14 +     68526 T-------A------------------CGTACACAAATG
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        41723 14 +     89929 T-------A------------------TGTACACAAATG
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43137 14 +     51399 T-------A------------------TGTACACAAATG
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299374 14 -  14605196 t-------a------------------tgtacacaaatg
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3166  4 +     22620 T-------A------------------CA----------
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pithecia_albicans.k141_1476471                              5024 14 +     26961 T-------A------------------TATACACAAATG
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1169 14 +     23417 T-------A------------------TATACACAAATG
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                5016 14 +     29694 T-------A------------------TATACACAAATG
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          30042 14 +     52772 T-------A------------------TATACACAAATG
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           5038 14 +     26198 T-------A------------------TATACACAAATG
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3941586 14 +   4542175 T-------A------------------TATACACAAATG
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            5002 14 -     23490 T-------A------------------TATACACAAATG
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9258 14 -     39866 T-------A------------------TATACACAAATG
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18424 14 +     34906 T-------A------------------TATACACAAATG
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       22686 14 +     87950 T-------A------------------TATACACAAATG
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23515 14 +     88961 T-------A------------------TATACACAAATG
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9186 14 +     39403 T-------A------------------TATACACAAATG
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          22967 14 -     87928 T-------A------------------TATACACAAATG
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         29926 14 +     60166 T-------A------------------TATACACAAATG
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30123 14 +     67232 T-------A------------------TATACACAAATG
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          25596 14 +     90634 T-------A------------------TATACACAAATG
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          22968 14 -     89403 T-------A------------------TATACACAAATG
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189134496 14 + 189387572 t-------a------------------tatacacaaatg
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9574105 14 +   9816681 t-------a------------------tatacacaaatg
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76677 14 -     81375 T-------A------------------TATACACAAATG
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8494 14 +     19060 T-------A------------------TATACACAAATG
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            12302 10 -     21651 t-------acat--gt----------gta----------
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            16573  4 -     21811 t-------a------------------ta----------
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41999  1 +     42204 ----------------------------G----------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 7 C 0
s Pteropus_alecto.KB030862.1                              22978175  4 +  28871421 t-------a------------------ta----------
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Puma_concolor.QAVW01001104.1                            20275706  4 -  38429054 c-------a------------------ta----------
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             18486 14 -     91421 T-------A------------------TATACACAAATG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612609 14 +   7812017 T-------A------------------TATACACAAATG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18516 14 -     72585 T-------A------------------TATACACAAATG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  6933  4 +     55207 T-------A------------------TA----------
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 809
s Rhinopithecus_bieti.k119_217274                            10184 14 -     11128 T-------A------------------TATACACAAATG
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239552 14 - 195417433 t-------a------------------tatacacaaatg
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675199 14 +   7961872 T-------A------------------TATACACAAATG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89265  4 -     96226 t-------a------------------tg----------
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154558  4 -    313613 G-------A------------------TA----------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                         3358 14 -     12572 T-------A------------------TATACACAAATG
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30210 14 +     39453 T-------A------------------TATACACAAATG
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           10718 14 +     27826 T-------A------------------TATACACAAATG
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10259 14 -     19483 T-------A------------------TATACACAAATG
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3557 14 -     12762 T-------A------------------TATACACAAATG
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3402 14 +     13763 T-------A------------------TATACACAAATG
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     2200  8 -     30804 T-------A--------------CATGTG----------
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Sorex_araneus.JH798187.1                                13652384  3 -  18376816 T-------A------------------C-----------
i Sorex_araneus.JH798187.1                               C 0 I 7
s Spermophilus_dauricus.KZ294078.1                         1955547  4 -   3870691 C-------G------------------TG----------
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             32455  1 +     97271 ----------------------------g----------
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 7 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              19731  4 -    196729 C-------A------------------TA----------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6813082  4 +  69701581 t-------a------------------ta----------
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                12611  4 +     41958 T-------A------------------CA----------
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tarsius_lariang.k141_2201908                               27188  4 +     70052 T-------A------------------TA----------
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1985  4 -     16117 T-------A------------------TA----------
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186431886 14 + 186847797 t-------a------------------tatacacaaatg
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106807  2 +    114563 ---------------------------TG----------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 9 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     82636  4 +    610378 c-------a------------------ta----------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 2
s Trachypithecus_auratus.k141_722599                         14296 14 -     20410 T-------A------------------TATACACAAATG
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3419 14 -     12674 T-------A------------------TATACACAAATG
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14404 14 +     19930 T-------A------------------TATACACAAATG
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      10806 14 -     19997 T-------A------------------TATACACAAATG
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            50948 14 -     60166 T-------A------------------TATACACAAATG
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18410 14 -     27529 T-------A------------------TATACACAAATG
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                         41 14 +      9229 T-------A------------------TATACACAAATG
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          11944 14 -     21137 T-------A------------------TATACACAAATG
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                      44 14 +      9131 T-------A------------------TATACACAAATG
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                            8 14 -      3730 T-------A------------------TATACACAAATG
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28276 14 +     32220 T-------A------------------TATACACAAATG
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942373 14 +   6242583 T-------A------------------TATACACAAATG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11626 14 +     20839 T-------A------------------TATACACAAATG
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    1270  4 +     27266 t-------a------------------ta----------
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 I 379
s Tupaia_chinensis.KB320699.1                              2157550  4 +   4065304 t-------a------------------ta----------
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15739426  4 +  33153633 t-------g------------------ta----------
i Tursiops_truncatus.MRVK01000835.1                      I 110 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54670  4 -     77625 G-------A------------------TA----------
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4851840  1 -   5085361 ----------------------------g----------
i Ursus_maritimus.KK499267.1                             I 7 C 0
s Vicugna_pacos.KN270157.1                                 5373365  3 -   5488506 --------G------------------CA----------
i Vicugna_pacos.KN270157.1                               I 1 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 12230  1 -     43706 ----------------------------A----------
i Vulpes_lagopus.VulLag_flattened_line_30954             I 7 C 0
s Xerus_inauris.XerIna_scaffold_2302                          2537  4 +    224448 T-------A------------------TG----------
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      16219  3 +     63895 --------A------------------TA----------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   7643  0 +      8208 C
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73921  0 +    116680 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Rhinolophus_sinicus.LVEH01000134.1                        368295  0 -   3329780 C
e Rattus_norvegicus.chr16                                 53571770 803 +  90668790 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odocoileus_virginianus.KZ100018.1                         145852 291 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190536  0 +    196477 C
e Myotis_brandtii.KE162005.1                                280096 2104 -  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Megaderma_lyra.MegLyr_scaffold_4542                        14651  0 -    207569 C
e Manis_pentadactyla.KN006162.1                              51623 129 -    317179 I
e Manis_javanica.JSZB01003497.1                              19605 129 +    737560 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hipposideros_galeritus.HipGal_scaffold_101188                404  0 +      9903 C
e Hipposideros_armiger.JXIK01000431.1                       111834  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2147983 500 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64769  0 +   2246927 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           1799  0 +     23735 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1750  0 -      8501 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C

a score=0.000000
s hg38.chrUn_KI270753v1                                      10153 2 +     62944 C------A
s Acinonyx_jubatus.LLWD01001279.1                           828703 2 -   1699592 c------a
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 6
s Acomys_cahirinus.AcoCah_scaffold_12655                     72663 2 +     87051 T------A
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 5
s Ailuropoda_melanoleuca.LNAT01000098.1                    9512038 2 -  29979442 t------t
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 11
s Ailurus_fulgens.LNAC01001112.1                             81196 2 -    347723 T------T
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 11
s Allactaga_bullata.AllBul_scaffold_9566                     75753 2 -     89534 T------G
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 14
s Allenopithecus_nigroviridis.k141_3361533                   18016 2 -     52922 C------A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         17953 2 -     28001 c------a
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8448 2 -     18505 c------a
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9301 2 -     12518 C------A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              9764 2 +     51355 a------a
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                2869 2 -     36483 a------a
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13324 2 +     28687 a------a
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 1794 2 +     27940 a------a
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            2873 2 -      9457 a------a
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             1831 2 +     30492 a------a
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              5824 2 +     47717 a------a
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              2561 2 +      5663 a------a
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             17013 2 +     50774 a------a
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          677252 2 -   2318259 A------A
i Ammotragus_lervia.NIVO01071767.1                       I 105 I 8
s Anoura_caudifer.AnoCau_scaffold_1412                      186799 2 +    412891 t------a
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 8
s Antilocapra_americana.AntAmePen_scaffold_12469             99725 2 -    100397 T------A
i Antilocapra_americana.AntAmePen_scaffold_12469         I 101 I 8
s Aplodontia_rufa.AprRuf_scaffold_68852                      14069 2 +     20879 T------A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 14
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6205 2 +     43469 t------a
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 8
s Ateles_geoffroyi_b.tarseq_1536                             21210025 2 -  21539123 a------a
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               44821 2 -     48001 a------a
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 27625 2 -     30947 A------A
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9397 2 -     89868 a------a
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              13781 2 -     40414 A------A
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                21670 2 +     72325 a------a
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193301 2 +  23207421 t------a
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 8
s Balaenoptera_bonaerensis.DF707048.1                         3766 2 -     18090 t------a
i Balaenoptera_bonaerensis.DF707048.1                    C 0 I 8
s Beatragus_hunteri.BeaHun_scaffold_50177                    28337 2 +     34529 T------A
i Beatragus_hunteri.BeaHun_scaffold_50177                I 103 I 8
s Bison_bison.KN261452.1                                    202204 2 -    288883 N------N
i Bison_bison.KN261452.1                                 I 413 I 8
s Bos_indicus.CM003047.1                                  20275444 2 +  48749331 T------A
i Bos_indicus.CM003047.1                                 I 470 I 8
s Bos_mutus.JH880303.1                                     1127996 2 -   1948126 T------A
i Bos_mutus.JH880303.1                                   I 470 I 8
s Bos_taurus.CM000203.6                                   18086082 2 +  45695690 T------A
i Bos_taurus.CM000203.6                                  I 470 I 8
s Bubalus_bubalis.KI419123.1                               2822040 2 +   4408762 T------A
i Bubalus_bubalis.KI419123.1                             I 471 I 8
s Cacajao_ayresi.k141_552049                                102647 2 -    122966 A------A
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   62152 2 +     81800 A------A
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31332 2 -     95584 A------A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55433 2 -    119600 a------a
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10003847 2 -  17673402 T------G
i Camelus_bactrianus.KN276810.1                          C 0 I 8
s Camelus_dromedarius.KN272107.1                           2336319 2 -   7040546 T------G
i Camelus_dromedarius.KN272107.1                         C 0 I 8
s Camelus_ferus.KB017975.1                                  404617 2 -   1652518 T------G
i Camelus_ferus.KB017975.1                               C 0 I 8
s CanFam4.chr16                                           17801916 2 -  60362399 T------T
i CanFam4.chr16                                          I 1303 I 11
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     2657 2 -     43241 T------T
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 1296 I 11
s Canis_lupus_dingo.QKWQ01000480.1                         9037359 2 -   9314153 T------T
i Canis_lupus_dingo.QKWQ01000480.1                       I 1303 I 11
s Canis_lupus_familiaris.chr16                            17961828 2 -  59632846 T------T
i Canis_lupus_familiaris.chr16                           I 1296 I 11
s Canis_lupus_orion.HG994398.1                            18503130 2 +  63665305 T------T
i Canis_lupus_orion.HG994398.1                           I 1301 I 11
s Capra_aegagrus.CM003241.1                               18831358 2 +  46296322 A------A
i Capra_aegagrus.CM003241.1                              I 100 I 8
s Capra_hircus.CM004588.1                                 18062078 2 -  44709034 A------a
i Capra_hircus.CM004588.1                                I 100 I 8
s Capromys_pilorides.CapPil_scaffold_65020                    2372 2 -     12242 T------A
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 15
s Carlito_syrichta.NW_007259797.1                           156699 2 -    496798 c------a
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6547 2 -     11696 t------a
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 8
s Castor_canadensis.CasCan_scaffold_2074                    138667 2 +    179628 T------A
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 14
s Catagonus_wagneri.CatWag_scaffold_2839                     95505 2 +    217609 T------A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 8
s Cavia_aperea.AVPZ01000300.1                             18350859 2 -  23392119 t------g
i Cavia_aperea.AVPZ01000300.1                            C 0 I 16
s Cavia_porcellus.DS562891.1                              18363122 2 -  23407841 T------G
i Cavia_porcellus.DS562891.1                             C 0 I 16
s Cavia_tschudii.CavTsc_scaffold_8919                       102004 2 +    143979 T------G
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 I 16
s Cephalopachus_bancanus.k141_1423433                         6197 2 +     31688 C------A
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4478979 2 +   4669795 c------a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3473 2 +     17872 C------A
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4068 2 -     14043 C------A
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12163 2 +     27781 C------A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12313 2 -     20310 C------A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15293 2 +     29689 C------A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10049 2 -     20078 C------A
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          17964 2 -     27936 C------A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            6831 2 -     17152 C------A
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826563 2 +  39242232 C------A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226067 2 -  21565898 C------A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43186 2 -     53127 C------A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3436 2 +     13442 C------A
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       17982 2 -     27947 C------A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1011 2 +     10558 C------A
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4016 2 +     14005 C------A
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1253 2 -     17098 A------A
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1129 2 +     17877 A------A
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            158696 2 -    216457 A------A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63171 2 +     76511 A------A
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254302 2 +   2543920 t------a
i Chinchilla_lanigera.JH722012.1                         C 0 I 15
s Chiropotes_israelita.k141_747660                           99776 2 +    146308 A------A
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          31584 2 -     50570 A------A
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18431886 2 -  18827391 C------A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18383 2 -     50209 C------A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425387 2 + 135778131 c------a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1913888 2 +   2368649 c------a
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952136 2 + 200372422 C------A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40413 2 +     84244 C------A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549423 2 -  53390261 t------a
i Condylura_cristata.JH655891.1                          C 0 I 8
s Cricetomys_gambianus.CriGam_scaffold_18520                 51917 2 +     63868 T------A
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 5
s Crocidura_indochinensis.CroInd_scaffold_239572              3170 2 -      5012 T------A
i Crocidura_indochinensis.CroInd_scaffold_239572         C 0 I 9
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29902 2 -     87169 t------a
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 6
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37332 2 +     51376 G------A
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 15
s Delphinapterus_leucas.KZ290073.1                        16812932 2 +  35494412 t------a
i Delphinapterus_leucas.KZ290073.1                       C 0 I 8
s Desmodus_rotundus.KZ672289.1                             8631545 2 +  20541912 t------a
i Desmodus_rotundus.KZ672289.1                           C 0 I 8
s Dinomys_branickii.DinBra_scaffold_21862                    37788 2 +     67921 T------A
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 15
s Dolichotis_patagonum.DolPat_scaffold_30833                 34913 2 -     42551 T------A
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 I 15
s Elaphurus_davidianus.JRFZ01104969.1                       313126 2 +    607251 t------a
i Elaphurus_davidianus.JRFZ01104969.1                    I 820 I 8
s Ellobius_lutescens.LOEQ01008920.1                          22426 2 -    110024 t------a
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 3
s Ellobius_talpinus.LOJH01081419.1                            2346 2 +      8657 t------a
i Ellobius_talpinus.LOJH01081419.1                       C 0 I 3
s Enhydra_lutris.KZ291758.1                               16331086 2 -  41312741 T------T
i Enhydra_lutris.KZ291758.1                              C 0 I 11
s Erythrocebus_patas.Contig38                             21208559 2 -  21539334 C------A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12614 2 +    133382 T------A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 8
s Eubalaena_japonica.EubJap_flattened_line_31514             26567 2 -     44125 T------A
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 I 8
s Felis_catus.CM001381.2                                  20238344 2 + 206538554 c------a
i Felis_catus.CM001381.2                                 C 0 I 6
s Felis_catus_fca126.CM031415.1                           20197187 2 + 205367284 C------A
i Felis_catus_fca126.CM031415.1                          C 0 I 6
s Felis_nigripes.FelNig_flattened_line_20823                 10941 2 -     36744 c------a
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 6
s Fukomys_damarensis.KN121974.1                             851808 2 +   3816255 t------g
i Fukomys_damarensis.KN121974.1                          C 0 I 16
s Galeopterus_variegatus.GalVar_scaffold_108840               3750 2 -      9135 T------A
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 I 9
s Giraffa_tippelskirchi.LVKQ01S007888.1                     610368 2 -    660261 T------A
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 103 I 8
s Glis_glis.GliGli_scaffold_19807                            32318 2 +     49224 T------A
i Glis_glis.GliGli_scaffold_19807                        C 0 I 10
s Gorilla_beringei.k141_3596273                              19398 2 -     32273 C------A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341534 2 + 186649187 c------a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   34003 2 +     78134 T------A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 14
s Helogale_parvula.HelPar_flattened_line_2585               243740 2 +    327341 T------A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 6
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 19574 2 +     36099 A------A
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 107 I 8
s Heterocephalus_glaber.JH602082.1                        20663598 2 +  22651954 t------a
i Heterocephalus_glaber.JH602082.1                       C 0 I 16
s Hoolock_leuconedys.ctg274                                    438192 2 +    630532 C------A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46437 2 +     55795 T------A
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 6
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23248 2 -    143317 T------A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 15
s Hystrix_cristata.HysCri_scaffold_5660                      84480 2 +    135385 T------A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 25
s Ictidomys_tridecemlineatus.JH393364.1                    7522405 2 -   7955117 C------A
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 14
s Inia_geoffrensis.IniGeo_flattened_line_34779                 164 2 -     31341 T------A
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 I 8
s Jaculus_jaculus.JH725527.1                               8278487 2 -   9596543 t------a
i Jaculus_jaculus.JH725527.1                             C 0 I 14
s Kogia_breviceps.KogBre_flattened_line_81059                  138 2 -     18011 T------A
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 I 8
s Lagothrix_lagothricha.k141_1005387                         15829 2 -     38430 A------A
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    17791 2 -     42476 t------a
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 42
s Leptonychotes_weddellii.KB714746.1                       3044521 2 +   3914936 c------t
i Leptonychotes_weddellii.KB714746.1                     C 0 I 11
s Lepus_americanus.LepAme_scaffold_107385                     8320 2 -     14121 T------A
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 4
s Lipotes_vexillifer.KE559953.1                             269202 2 -    662738 t------a
i Lipotes_vexillifer.KE559953.1                          C 0 I 8
s Lophocebus_aterrimus.ctg367                              1440521 2 +   1826925 C------A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17958068 2 -  59628241 T------T
i Lycaon_pictus.CM007581.1                               I 1296 I 11
s Macaca_arctoides.k141_2326796                              10331 2 +     40492 C------A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679585 2 +  60120075 C------A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16102 2 -     26193 C------A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            83878 2 -    114318 c------a
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9569 2 -     23192 C------A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19033 2 -     29190 C------A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27611 2 +     37952 C------A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842688 2 + 187317192 c------a
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461266 2 -  25927173 c------a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83467 2 +     89720 C------A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10460 2 +     20474 C------A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10257 2 -     14993 C------A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333119 2 -    668171 C------A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8569 2 -     24072 C------A
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29200 2 -     45290 C------A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92088 2 +     94391 t------g
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 8
s Mandrillus_leucophaeus.scaffold280                      23940788 2 -  24302211 C------A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354904 2 +    752769 c------a
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33104686 2 -  40650429 C------A
i Marmota_marmota.CZRN01000018.1                         C 0 I 14
s Mellivora_capensis.MelCap_flattened_line_69365             11805 2 +     13704 t------t
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 11
s Meriones_unguiculatus.MerUng_scaffold_7390                 34671 2 +    140813 C------A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 5
s Mesocricetus_auratus.KB708134.1                         12184126 8 -  29670104 tacacata
i Mesocricetus_auratus.KB708134.1                        C 0 I 3
s Mesoplodon_bidens.MesBid_scaffold_108144                    4820 2 +     10310 T------A
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 I 8
s Micronycteris_hirsuta.MicHir_scaffold_52381                17296 2 -     19307 t------a
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 8
s Microtus_ochrogaster.CM001695.1                         11262409 2 -  27267610 t------a
i Microtus_ochrogaster.CM001695.1                        C 0 I 3
s Miniopterus_natalensis.LDJU01000034.1                    1851700 2 +   8254450 c------a
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 8
s Miniopterus_schreibersii.MinSch_scaffold_18080             35384 2 +     64694 C------A
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 8
s Miopithecus_ogouensis.k141_534055                          12464 2 -     28506 C------A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         7389 2 -      8324 c------t
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 11
s Monodon_monoceros.MonMon_M_scaffold_103                    28315 2 -    437263 T------A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 8
s Mormoops_blainvillei.MorMeg_scaffold_1417                 143092 2 -    366855 T------A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 8
s Moschus_moschiferus.MosMos_scaffold_13123                   2411 2 +     82753 T------A
i Moschus_moschiferus.MosMos_scaffold_13123              I 82 I 8
s Murina_feae.MurFea_scaffold_85699                           8416 2 +     14753 T------A
i Murina_feae.MurFea_scaffold_85699                      C 0 I 28
s Mus_caroli.LT608237.1                                   84363058 2 - 120012414 t------a
i Mus_caroli.LT608237.1                                  C 0 I 5
s Mus_musculus.chr8                                       87652559 2 - 129401213 t------a
i Mus_musculus.chr8                                      C 0 I 5
s Mus_pahari.LT608297.1                                   31357293 2 -  89631738 t------a
i Mus_pahari.LT608297.1                                  C 0 I 5
s Mus_spretus.CM004101.1                                  90755048 2 - 130317789 t------a
i Mus_spretus.CM004101.1                                 C 0 I 5
s Mustela_putorius.JH418006.1                               303187 2 -  14710649 T------T
i Mustela_putorius.JH418006.1                            C 0 I 11
s Myocastor_coypus.MyoCoy_scaffold_10123                     72554 2 -     80779 T------A
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 I 15
s Myotis_davidii.KB100139.1                                1589469 2 -   6019432 t------a
i Myotis_davidii.KB100139.1                              C 0 I 28
s Myotis_lucifugus.GL429869.1                              3905559 2 -   4330536 t------a
i Myotis_lucifugus.GL429869.1                            C 0 I 28
s Myotis_myotis.MyoMyo_scaffold_281845                        1713 2 +      1835 t------a
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 I 28
s Nannospalax_galili.KL204047.1                            2036848 2 -   3037898 T------G
i Nannospalax_galili.KL204047.1                          C 0 I 6
s Nasalis_larvatus.k141_413338                               18514 2 +     21681 C------A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308982 2 +  31847680 c------t
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 11
s Neophocaena_asiaeorientalis.KZ687982.1                   5867279 2 +   7148211 t------a
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 8
s Noctilio_leporinus.NocLep_scaffold_251                    759287 1 +    783361 T-------
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 7
s Nyctereutes_procyonoides.CAJHUB010000658.1               9152000 2 -   9404916 t------t
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 11
s Ochotona_princeps.JH802162.1                             1365723 2 +   3988456 t------a
i Ochotona_princeps.JH802162.1                           C 0 I 4
s Odobenus_rosmarus.KB229312.1                              508124 2 -   2017862 t------t
i Odobenus_rosmarus.KB229312.1                           C 0 I 11
s Okapia_johnstoni.LVCL01S0005463.1                          78280 2 -    150152 T------A
i Okapia_johnstoni.LVCL01S0005463.1                      I 99 I 8
s Ondatra_zibethicus.OndZib_scaffold_46174                   27067 2 +     28053 T------A
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 3
s Onychomys_torridus.OnyTor_scaffold_2986                    82070 2 +    102263 T------A
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 9
s Orcinus_orca.KB316932.1                                  2783180 2 -  10937097 t------a
i Orcinus_orca.KB316932.1                                C 0 I 8
s Oryctolagus_cuniculus.CM000791.1                        67149220 2 + 174332312 t------a
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 4
s Otocyon_megalotis.JAEUCK010005147.1                       463786 2 -    559221 t------t
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 14
s Ovis_aries.CM001607.2                                   17587536 2 +  44047080 A------A
i Ovis_aries.CM001607.2                                  I 103 I 8
s Ovis_canadensis.OviCan_scaffold_2572                      175528 2 -    191736 A------A
i Ovis_canadensis.OviCan_scaffold_2572                   I 103 I 8
s Pan_paniscus.KQ411613.1                                    47499 2 +     80009 c------a
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146365 2 + 189151597 c------a
i Pan_troglodytes.CM009242.2                             I 13 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152552 2 +    230217 C------A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 6
s Panthera_pardus.KV860321.1                                265761 2 +  18783137 c------a
i Panthera_pardus.KV860321.1                             C 0 I 6
s Panthera_tigris.KE722367.1                               4722641 2 -   8748460 C------A
i Panthera_tigris.KE722367.1                             C 0 I 6
s Pantholops_hodgsonii.KE114653.1                          1266439 2 -   2937107 T------A
i Pantholops_hodgsonii.KE114653.1                        I 102 I 8
s Papio_anubis.CM001495.2                                183446594 2 + 183742232 c------a
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10244 2 +     20448 C------A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567052 2 +  20919399 c------a
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   8984 2 +     41871 C------A
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12277 2 +     27711 C------A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3276 2 -     11374 C------A
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14062 2 -     78924 T------A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 6
s Peromyscus_maniculatus.KI615324.1                       18196704 2 -  18517816 a------a
i Peromyscus_maniculatus.KI615324.1                      C 0 I 9
s Petromus_typicus.PetTyp_scaffold_221660                       26 2 -      2102 T------T
i Petromus_typicus.PetTyp_scaffold_221660                C 0 I 16
s Phocoena_phocoena.PhoPho_flattened_line_24159              10236 2 +     63832 T------A
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 8
s Piliocolobus_badius.k141_1142974                            1591 2 +     68526 C------A
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        41737 2 +     89929 C------A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43151 2 +     51399 C------A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299388 2 -  14605196 C------A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3170 2 +     22620 T------A
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 35
s Pithecia_albicans.k141_1476471                              5038 2 +     26961 A------A
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1183 2 +     23417 A------A
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                5030 2 +     29694 A------A
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          30056 2 +     52772 A------A
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           5052 2 +     26198 A------A
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3941600 2 +   4542175 A------A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            5016 2 -     23490 A------A
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9272 2 -     39866 A------A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18438 2 +     34906 A------A
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       22700 2 +     87950 A------A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23529 2 +     88961 A------A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9200 2 +     39403 A------A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          22981 2 -     87928 A------A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         29940 2 +     60166 A------A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30137 2 +     67232 A------A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          25610 2 +     90634 A------A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          22982 2 -     89403 A------A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189134510 2 + 189387572 c------a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9574119 2 +   9816681 c------a
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76691 2 -     81375 C------A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8508 2 +     19060 C------A
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            12312 2 -     21651 t------a
i Psammomys_obesus.NESX01036370.1                        C 0 I 5
s Pteronotus_parnellii.KE909381.1                            16577 2 -     21811 t------a
i Pteronotus_parnellii.KE909381.1                        C 0 I 8
s Pteronura_brasiliensis.PteBra_flattened_line_31117         42000 2 +     42204 t------t
i Pteronura_brasiliensis.PteBra_flattened_line_31117     C 0 I 11
s Pteropus_alecto.KB030862.1                              22978179 2 +  28871421 t------g
i Pteropus_alecto.KB030862.1                             C 0 I 8
s Puma_concolor.QAVW01001104.1                            20275710 2 -  38429054 c------a
i Puma_concolor.QAVW01001104.1                           C 0 I 6
s Pygathrix_cinerea.k141_1153803                             18500 2 -     91421 C------A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612623 2 +   7812017 C------A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18530 2 -     72585 C------A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  7746 2 +     55207 T------A
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 809 I 8
s Rhinopithecus_bieti.k119_217274                            10198 2 -     11128 C------A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239566 2 - 195417433 c------a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675213 2 +   7961872 C------A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89269 2 -     96226 t------g
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 8
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154562 2 -    313613 T------A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 8
s Semnopithecus_entellus.k141_1672505                         3372 2 -     12572 C------A
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30224 2 +     39453 C------A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           10732 2 +     27826 C------A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10273 2 -     19483 C------A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3571 2 -     12762 C------A
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3416 2 +     13763 C------A
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     2208 2 -     30804 T------A
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 I 3
s Spermophilus_dauricus.KZ294078.1                         1955551 2 -   3870691 C------A
i Spermophilus_dauricus.KZ294078.1                       C 0 I 14
s Spilogale_gracilis.SpiGra_flattened_line_13525             32456 2 +     97271 t------t
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 11
s Suricata_suricatta.SurSur_flattened_line_6629              19735 2 -    196729 T------A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 6
s Sus_scrofa.CM000828.4                                    6813086 2 +  69701581 t------a
i Sus_scrofa.CM000828.4                                  C 0 I 8
s Tadarida_brasiliensis.TadBra_scaffold_25820                12615 2 +     41958 T------A
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 8
s Tarsius_lariang.k141_2201908                               27192 2 +     70052 C------A
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1989 2 -     16117 C------A
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186431900 2 + 186847797 c------a
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106809 2 +    114563 T------T
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 16
s Tonatia_saurophila.TonSau_scaffold_294                     82642 2 +    610378 t------a
i Tonatia_saurophila.TonSau_scaffold_294                 I 2 I 8
s Trachypithecus_auratus.k141_722599                         14310 2 -     20410 C------A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3433 2 -     12674 C------A
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14418 2 +     19930 C------A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      10820 2 -     19997 C------A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            50962 2 -     60166 C------A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18424 2 -     27529 C------A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                         55 2 +      9229 C------A
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          11958 2 -     21137 C------A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                      58 2 +      9131 C------A
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                           22 2 -      3730 C------A
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28290 2 +     32220 C------A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942387 2 +   6242583 C------A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11640 2 +     20839 C------A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    1653 2 +     27266 C------A
i Tragulus_javanicus.TraJav_scaffold_40725               I 379 I 8
s Tupaia_chinensis.KB320699.1                              2157554 1 +   4065304 t-------
i Tupaia_chinensis.KB320699.1                            C 0 I 3
s Tursiops_truncatus.MRVK01000835.1                       15739430 2 +  33153633 t------a
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 8
s Uropsilus_gracilis.UroGra_scaffold_12083                   54674 2 -     77625 T------G
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 8
s Ursus_maritimus.KK499267.1                               4851841 2 -   5085361 t------t
i Ursus_maritimus.KK499267.1                             C 0 I 11
s Vicugna_pacos.KN270157.1                                 5373368 2 -   5488506 T------G
i Vicugna_pacos.KN270157.1                               C 0 I 8
s Vulpes_lagopus.VulLag_flattened_line_30954                 12231 2 -     43706 T------T
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 14
s Xerus_inauris.XerIna_scaffold_2302                          2541 2 +    224448 C------A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 14
s Zapus_hudsonius.ZapHud_scaffold_11398                      16222 2 +     63895 T------G
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 14
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202 0 +      8798 C
e Galago_senegalensis.k141_631886                             7400 0 +     11339 C
e Galago_moholi.ctg2040                                     429710 0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964 2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445 0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734 0 -     33856 C
e Perodicticus_potto.k141_1186926                              597 0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219 0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   7643 0 +      8208 C
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73921 0 +    116680 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sorex_araneus.JH798187.1                                13652387 7 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Rhinolophus_sinicus.LVEH01000134.1                        368295 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53571770 803 +  90668790 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odocoileus_virginianus.KZ100018.1                         145852 291 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869 0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414 0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947 0 - 196305487 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190536 0 +    196477 C
e Myotis_brandtii.KE162005.1                                280096 2104 -  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398 7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Megaderma_lyra.MegLyr_scaffold_4542                        14651 0 -    207569 C
e Manis_pentadactyla.KN006162.1                              51623 129 -    317179 I
e Manis_javanica.JSZB01003497.1                              19605 129 +    737560 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hipposideros_galeritus.HipGal_scaffold_101188                404 0 +      9903 C
e Hipposideros_armiger.JXIK01000431.1                       111834 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689 0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2147983 500 -  14770903 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64769 0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_15900             1276 14 -     75252 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11668671 0 + 224834208 C
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           1799 0 +     23735 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1750 0 -      8501 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538 0 +      5281 C

a score=0.000000
s hg38.chrUn_KI270753v1                                      10155 1 +     62944 T
s Allactaga_bullata.AllBul_scaffold_9566                     75769 1 -     89534 C
i Allactaga_bullata.AllBul_scaffold_9566                 I 14 C 0
s Allenopithecus_nigroviridis.k141_3361533                   18018 1 -     52922 T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         17955 1 -     28001 t
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8450 1 -     18505 t
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9303 1 -     12518 T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              9766 1 +     51355 t
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                2871 1 -     36483 t
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13326 1 +     28687 t
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 1796 1 +     27940 t
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            2875 1 -      9457 t
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             1833 1 +     30492 t
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              5826 1 +     47717 t
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              2563 1 +      5663 t
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             17015 1 +     50774 t
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          677262 1 -   2318259 t
i Ammotragus_lervia.NIVO01071767.1                       I 8 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      186809 1 +    412891 t
i Anoura_caudifer.AnoCau_scaffold_1412                   I 8 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             99735 1 -    100397 T
i Antilocapra_americana.AntAmePen_scaffold_12469         I 8 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      14085 1 +     20879 T
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 14 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6215 1 +     43469 t
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 8 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21210027 1 -  21539123 t
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               44823 1 -     48001 t
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 27627 1 -     30947 T
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9399 1 -     89868 t
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              13783 1 -     40414 T
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                21672 1 +     72325 t
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193311 1 +  23207421 t
i Balaenoptera_acutorostrata.KI537508.1                  I 8 C 0
s Balaenoptera_bonaerensis.DF707048.1                         3776 1 -     18090 t
i Balaenoptera_bonaerensis.DF707048.1                    I 8 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    28347 1 +     34529 T
i Beatragus_hunteri.BeaHun_scaffold_50177                I 8 C 0
s Bison_bison.KN261452.1                                    202214 1 -    288883 T
i Bison_bison.KN261452.1                                 I 8 C 0
s Bos_indicus.CM003047.1                                  20275454 1 +  48749331 T
i Bos_indicus.CM003047.1                                 I 8 C 0
s Bos_mutus.JH880303.1                                     1128006 1 -   1948126 T
i Bos_mutus.JH880303.1                                   I 8 C 0
s Bos_taurus.CM000203.6                                   18086092 1 +  45695690 T
i Bos_taurus.CM000203.6                                  I 8 C 0
s Bubalus_bubalis.KI419123.1                               2822050 1 +   4408762 T
i Bubalus_bubalis.KI419123.1                             I 8 C 0
s Cacajao_ayresi.k141_552049                                102649 1 -    122966 T
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   62154 1 +     81800 T
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31334 1 -     95584 T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55435 1 -    119600 t
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10003857 1 -  17673402 T
i Camelus_bactrianus.KN276810.1                          I 8 C 0
s Camelus_dromedarius.KN272107.1                           2336329 1 -   7040546 T
i Camelus_dromedarius.KN272107.1                         I 8 C 0
s Camelus_ferus.KB017975.1                                  404627 1 -   1652518 T
i Camelus_ferus.KB017975.1                               I 8 C 0
s Capra_aegagrus.CM003241.1                               18831368 1 +  46296322 t
i Capra_aegagrus.CM003241.1                              I 8 C 0
s Capra_hircus.CM004588.1                                 18062088 1 -  44709034 t
i Capra_hircus.CM004588.1                                I 8 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    2389 1 -     12242 T
i Capromys_pilorides.CapPil_scaffold_65020               I 15 I 6
s Carlito_syrichta.NW_007259797.1                           156701 1 -    496798 t
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6557 1 -     11696 t
i Carollia_perspicillata.CarPer_scaffold_92756           I 8 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138683 1 +    179628 C
i Castor_canadensis.CasCan_scaffold_2074                 I 14 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     95515 1 +    217609 T
i Catagonus_wagneri.CatWag_scaffold_2839                 I 8 C 0
s Cephalopachus_bancanus.k141_1423433                         6199 1 +     31688 T
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4478981 1 +   4669795 t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3475 1 +     17872 T
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4070 1 -     14043 T
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12165 1 +     27781 T
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12315 1 -     20310 T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15295 1 +     29689 T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10051 1 -     20078 T
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          17966 1 -     27936 T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            6833 1 -     17152 T
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826565 1 +  39242232 T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226069 1 -  21565898 T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43188 1 -     53127 T
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3438 1 +     13442 T
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       17984 1 -     27947 T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1013 1 +     10558 T
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4018 1 +     14005 T
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1255 1 -     17098 T
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1131 1 +     17877 T
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            158698 1 -    216457 T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63173 1 +     76511 T
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254319 1 +   2543920 C
i Chinchilla_lanigera.JH722012.1                         I 15 I 6
s Chiropotes_israelita.k141_747660                           99778 1 +    146308 T
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          31586 1 -     50570 T
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18431888 1 -  18827391 T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18385 1 -     50209 T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425389 1 + 135778131 t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1913890 1 +   2368649 t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952138 1 + 200372422 T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40415 1 +     84244 T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549433 1 -  53390261 t
i Condylura_cristata.JH655891.1                          I 8 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               4176 1 -     19598 T
i Crocidura_indochinensis.CroInd_scaffold_37019          I 14 I 19
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37349 1 +     51376 T
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 15 I 6
s Dasyprocta_punctata.DasPun_flattened_line_15900             1290 1 -     75252 T
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 14 I 6
s Delphinapterus_leucas.KZ290073.1                        16812942 1 +  35494412 t
i Delphinapterus_leucas.KZ290073.1                       I 8 C 0
s Desmodus_rotundus.KZ672289.1                             8631555 1 +  20541912 t
i Desmodus_rotundus.KZ672289.1                           I 8 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37805 1 +     67921 T
i Dinomys_branickii.DinBra_scaffold_21862                I 15 I 6
s Dolichotis_patagonum.DolPat_scaffold_30833                 34930 1 -     42551 T
i Dolichotis_patagonum.DolPat_scaffold_30833             I 15 I 6
s Elaphurus_davidianus.JRFZ01104969.1                       313136 1 +    607251 t
i Elaphurus_davidianus.JRFZ01104969.1                    I 8 C 0
s Erythrocebus_patas.Contig38                             21208561 1 -  21539334 T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12624 1 +    133382 T
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 8 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             26577 1 -     44125 T
i Eubalaena_japonica.EubJap_flattened_line_31514         I 8 C 0
s Fukomys_damarensis.KN121974.1                             851826 1 +   3816255 t
i Fukomys_damarensis.KN121974.1                          I 16 I 6
s Galeopterus_variegatus.GalVar_scaffold_108840               3761 1 -      9135 T
i Galeopterus_variegatus.GalVar_scaffold_108840          I 9 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     610378 1 -    660261 t
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 8 C 0
s Glis_glis.GliGli_scaffold_19807                            32330 1 +     49224 T
i Glis_glis.GliGli_scaffold_19807                        I 10 C 0
s Gorilla_beringei.k141_3596273                              19400 1 -     32273 T
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341536 1 + 186649187 t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   34019 1 +     78134 T
i Graphiurus_murinus.GraMur_scaffold_10447               I 14 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 19584 1 +     36099 T
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 8 C 0
s Heterocephalus_glaber.JH602082.1                        20663616 1 +  22651954 t
i Heterocephalus_glaber.JH602082.1                       I 16 I 6
s Hoolock_leuconedys.ctg274                                    438194 1 +    630532 T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23265 1 -    143317 T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 15 I 6
s Hystrix_cristata.HysCri_scaffold_5660                      84507 1 +    135385 T
i Hystrix_cristata.HysCri_scaffold_5660                  I 25 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7522421 1 -   7955117 t
i Ictidomys_tridecemlineatus.JH393364.1                  I 14 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                 174 1 -     31341 T
i Inia_geoffrensis.IniGeo_flattened_line_34779           I 8 C 0
s Jaculus_jaculus.JH725527.1                               8278503 1 -   9596543 c
i Jaculus_jaculus.JH725527.1                             I 14 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                  148 1 -     18011 T
i Kogia_breviceps.KogBre_flattened_line_81059            I 8 C 0
s Lagothrix_lagothricha.k141_1005387                         15831 1 -     38430 T
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    17835 1 -     42476 t
i Lasiurus_borealis.LasBor_scaffold_32767                I 42 I 292
s Lepus_americanus.LepAme_scaffold_107385                     8326 1 -     14121 C
i Lepus_americanus.LepAme_scaffold_107385                I 4 C 0
s Lipotes_vexillifer.KE559953.1                             269212 1 -    662738 t
i Lipotes_vexillifer.KE559953.1                          I 8 C 0
s Lophocebus_aterrimus.ctg367                              1440523 1 +   1826925 T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                              10333 1 +     40492 T
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679587 1 +  60120075 T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16104 1 -     26193 T
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            83880 1 -    114318 t
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9571 1 -     23192 T
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19035 1 -     29190 C
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27613 1 +     37952 T
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842690 1 + 187317192 t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461268 1 -  25927173 t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83469 1 +     89720 T
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10462 1 +     20474 T
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10259 1 -     14993 T
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333121 1 -    668171 T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8571 1 -     24072 T
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29202 1 -     45290 T
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92098 1 +     94391 t
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 8 C 0
s Mandrillus_leucophaeus.scaffold280                      23940790 1 -  24302211 T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354906 1 +    752769 t
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33104702 1 -  40650429 t
i Marmota_marmota.CZRN01000018.1                         I 14 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    4830 1 +     10310 T
i Mesoplodon_bidens.MesBid_scaffold_108144               I 8 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                17306 1 -     19307 t
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 8 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1851710 1 +   8254450 t
i Miniopterus_natalensis.LDJU01000034.1                  I 8 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             35394 1 +     64694 T
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 8 C 0
s Miopithecus_ogouensis.k141_534055                          12466 1 -     28506 T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    28325 1 -    437263 T
i Monodon_monoceros.MonMon_M_scaffold_103                I 8 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 143102 1 -    366855 T
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 8 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   2421 1 +     82753 T
i Moschus_moschiferus.MosMos_scaffold_13123              I 8 C 0
s Murina_feae.MurFea_scaffold_85699                           8446 1 +     14753 T
i Murina_feae.MurFea_scaffold_85699                      I 28 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     72571 1 -     80779 T
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 15 I 6
s Myotis_davidii.KB100139.1                                1589499 1 -   6019432 t
i Myotis_davidii.KB100139.1                              I 28 C 0
s Myotis_lucifugus.GL429869.1                              3905589 1 -   4330536 t
i Myotis_lucifugus.GL429869.1                            I 28 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                        1743 1 +      1835 t
i Myotis_myotis.MyoMyo_scaffold_281845                   I 28 C 0
s Nasalis_larvatus.k141_413338                               18516 1 +     21681 T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5867289 1 +   7148211 t
i Neophocaena_asiaeorientalis.KZ687982.1                 I 8 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    759295 1 +    783361 T
i Noctilio_leporinus.NocLep_scaffold_251                 I 7 C 0
s Ochotona_princeps.JH802162.1                             1365729 1 +   3988456 c
i Ochotona_princeps.JH802162.1                           I 4 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          78290 1 -    150152 t
i Okapia_johnstoni.LVCL01S0005463.1                      I 8 C 0
s Orcinus_orca.KB316932.1                                  2783190 1 -  10937097 t
i Orcinus_orca.KB316932.1                                I 8 C 0
s Oryctolagus_cuniculus.CM000791.1                        67149226 1 + 174332312 c
i Oryctolagus_cuniculus.CM000791.1                       I 4 C 0
s Ovis_aries.CM001607.2                                   17587546 1 +  44047080 t
i Ovis_aries.CM001607.2                                  I 8 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      175538 1 -    191736 T
i Ovis_canadensis.OviCan_scaffold_2572                   I 8 C 0
s Pan_paniscus.KQ411613.1                                    47501 1 +     80009 t
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146367 1 + 189151597 t
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1266449 1 -   2937107 t
i Pantholops_hodgsonii.KE114653.1                        I 8 C 0
s Papio_anubis.CM001495.2                                183446596 1 + 183742232 t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10246 1 +     20448 T
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567054 1 +  20919399 t
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   8986 1 +     41871 T
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12279 1 +     27711 T
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3278 1 -     11374 T
i Papio_ursinus.k141_5274964                             C 0 C 0
s Petromus_typicus.PetTyp_scaffold_221660                       44 1 -      2102 T
i Petromus_typicus.PetTyp_scaffold_221660                I 16 I 6
s Phocoena_phocoena.PhoPho_flattened_line_24159              10246 1 +     63832 T
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 8 C 0
s Piliocolobus_badius.k141_1142974                            1593 1 +     68526 T
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        41739 1 +     89929 T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43153 1 +     51399 T
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299390 1 -  14605196 T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3207 1 +     22620 c
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 35 I 44
s Pithecia_albicans.k141_1476471                              5040 1 +     26961 T
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1185 1 +     23417 T
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                5032 1 +     29694 T
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          30058 1 +     52772 T
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           5054 1 +     26198 T
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3941602 1 +   4542175 T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            5018 1 -     23490 T
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9274 1 -     39866 T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18440 1 +     34906 T
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       22702 1 +     87950 T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23531 1 +     88961 T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9202 1 +     39403 T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          22983 1 -     87928 T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         29942 1 +     60166 T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30139 1 +     67232 T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          25612 1 +     90634 T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          22984 1 -     89403 T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189134512 1 + 189387572 t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9574121 1 +   9816681 t
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76693 1 -     81375 T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8510 1 +     19060 T
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Pteronotus_parnellii.KE909381.1                            16587 1 -     21811 t
i Pteronotus_parnellii.KE909381.1                        I 8 C 0
s Pteropus_alecto.KB030862.1                              22978189 1 +  28871421 t
i Pteropus_alecto.KB030862.1                             I 8 I 2
s Pygathrix_cinerea.k141_1153803                             18502 1 -     91421 T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612625 1 +   7812017 T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18532 1 -     72585 T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  7756 1 +     55207 T
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 8 C 0
s Rhinopithecus_bieti.k119_217274                            10200 1 -     11128 T
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239568 1 - 195417433 t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675215 1 +   7961872 T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89279 1 -     96226 t
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 8 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154572 1 -    313613 T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 8 C 0
s Semnopithecus_entellus.k141_1672505                         3374 1 -     12572 T
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30226 1 +     39453 T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           10734 1 +     27826 T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10275 1 -     19483 T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3573 1 -     12762 T
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3418 1 +     13763 T
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sorex_araneus.JH798187.1                                13652394 1 -  18376816 T
i Sorex_araneus.JH798187.1                               I 7 C 0
s Spermophilus_dauricus.KZ294078.1                         1955567 1 -   3870691 t
i Spermophilus_dauricus.KZ294078.1                       I 14 C 0
s Sus_scrofa.CM000828.4                                    6813096 1 +  69701581 t
i Sus_scrofa.CM000828.4                                  I 8 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                12625 1 +     41958 T
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 8 C 0
s Tarsius_lariang.k141_2201908                               27194 1 +     70052 T
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1991 1 -     16117 T
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186431902 1 + 186847797 t
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106827 1 +    114563 T
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 16 I 6
s Tonatia_saurophila.TonSau_scaffold_294                     82652 1 +    610378 t
i Tonatia_saurophila.TonSau_scaffold_294                 I 8 C 0
s Trachypithecus_auratus.k141_722599                         14312 1 -     20410 T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3435 1 -     12674 T
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14420 1 +     19930 T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      10822 1 -     19997 T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            50964 1 -     60166 T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18426 1 -     27529 T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                         57 1 +      9229 T
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          11960 1 -     21137 T
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                      60 1 +      9131 T
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                           24 1 -      3730 T
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28292 1 +     32220 T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942389 1 +   6242583 T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11642 1 +     20839 T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    1663 1 +     27266 T
i Tragulus_javanicus.TraJav_scaffold_40725               I 8 C 0
s Tupaia_chinensis.KB320699.1                              2157558 1 +   4065304 t
i Tupaia_chinensis.KB320699.1                            I 3 C 0
s Tursiops_truncatus.MRVK01000835.1                       15739440 1 +  33153633 t
i Tursiops_truncatus.MRVK01000835.1                      I 8 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54684 1 -     77625 T
i Uropsilus_gracilis.UroGra_scaffold_12083               I 8 C 0
s Vicugna_pacos.KN270157.1                                 5373378 1 -   5488506 T
i Vicugna_pacos.KN270157.1                               I 8 C 0
s Xerus_inauris.XerIna_scaffold_2302                          2557 1 +    224448 T
i Xerus_inauris.XerIna_scaffold_2302                     I 14 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      16238 1 +     63895 C
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 14 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202 0 +      8798 C
e Galago_senegalensis.k141_631886                             7400 0 +     11339 C
e Galago_moholi.ctg2040                                     429710 0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964 2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Mus_pahari.LT608297.1                                   31357295 5 -  89631738 I
e Mus_spretus.CM004101.1                                  90755050 5 - 130317789 I
e Mus_musculus.chr8                                       87652561 5 - 129401213 I
e Mus_caroli.LT608237.1                                   84363060 5 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445 0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734 0 -     33856 C
e Perodicticus_potto.k141_1186926                              597 0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219 0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 12233 14 -     43706 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851843 11 -   5085361 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   7643 0 +      8208 C
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73921 0 +    116680 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Suricata_suricatta.SurSur_flattened_line_6629              19737 6 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             32458 11 +     97271 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_42075                     2210 3 -     30804 I
e Rhinolophus_sinicus.LVEH01000134.1                        368295 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53571770 803 +  90668790 I
e Puma_concolor.QAVW01001104.1                            20275712 6 -  38429054 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42002 11 +     42204 I
e Psammomys_obesus.NESX01036370.1                            12314 5 -     21651 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Peromyscus_maniculatus.KI615324.1                       18196706 9 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14064 6 -     78924 I
e Panthera_tigris.KE722367.1                               4722643 6 -   8748460 I
e Panthera_pardus.KV860321.1                                265763 6 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  152554 6 +    230217 I
e Otocyon_megalotis.JAEUCK010005147.1                       463788 14 -    559221 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Onychomys_torridus.OnyTor_scaffold_2986                    82072 9 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   27069 3 +     28053 I
e Odocoileus_virginianus.KZ100018.1                         145852 291 +    630418 I
e Odobenus_rosmarus.KB229312.1                              508126 11 -   2017862 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869 0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414 0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947 0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9152002 11 -   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                20308984 11 +  31847680 I
e Nannospalax_galili.KL204047.1                            2036850 6 -   3037898 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190536 0 +    196477 C
e Myotis_brandtii.KE162005.1                                280096 2104 -  10118263 I
e Mustela_putorius.JH418006.1                               303189 11 -  14710649 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398 7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7391 11 -      8324 I
e Microtus_ochrogaster.CM001695.1                         11262411 3 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184134 3 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 34673 5 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365             11807 11 +     13704 I
e Megaderma_lyra.MegLyr_scaffold_4542                        14651 0 -    207569 C
e Manis_pentadactyla.KN006162.1                              51623 129 -    317179 I
e Manis_javanica.JSZB01003497.1                              19605 129 +    737560 I
e Lycaon_pictus.CM007581.1                                17958070 11 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Leptonychotes_weddellii.KB714746.1                       3044523 11 +   3914936 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  46439 6 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_101188                404 0 +      9903 C
e Hipposideros_armiger.JXIK01000431.1                       111834 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Helogale_parvula.HelPar_flattened_line_2585               243742 6 +    327341 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689 0 +     41679 C
e Felis_nigripes.FelNig_flattened_line_20823                 10943 6 -     36744 I
e Felis_catus_fca126.CM031415.1                           20197189 6 + 205367284 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2147983 500 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16331088 11 -  41312741 I
e Ellobius_talpinus.LOJH01081419.1                            2348 3 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          22428 3 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64769 0 +   2246927 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             29904 6 -     87169 I
e Cricetulus_griseus.LT883664.1                           11668671 0 + 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_18520                 51919 5 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           1799 0 +     23735 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1750 0 -      8501 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                       102006 16 +    143979 I
e Cavia_porcellus.DS562891.1                              18363124 16 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18350861 16 -  23392119 I
e Canis_lupus_orion.HG994398.1                            18503132 11 +  63665305 I
e Canis_lupus_familiaris.chr16                            17961830 11 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9037361 11 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     2659 11 -     43241 I
e CanFam4.chr16                                           17801918 11 -  60362399 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538 0 +      5281 C
e Ailurus_fulgens.LNAC01001112.1                             81198 11 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512040 11 -  29979442 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     72665 5 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           828705 6 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      10156 1 +     62944 A
s Acomys_cahirinus.AcoCah_scaffold_12655                     72670 1 +     87051 A
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 5 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     75770 1 -     89534 A
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   18019 1 -     52922 A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         17956 1 -     28001 a
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8451 1 -     18505 a
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9304 1 -     12518 A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              9767 1 +     51355 a
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                2872 1 -     36483 a
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13327 1 +     28687 a
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 1797 1 +     27940 a
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            2876 1 -      9457 a
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             1834 1 +     30492 a
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              5827 1 +     47717 a
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              2564 1 +      5663 a
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             17016 1 +     50774 a
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          677263 1 -   2318259 a
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      186810 1 +    412891 a
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             99736 1 -    100397 A
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      14086 1 +     20879 A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6216 1 +     43469 a
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21210028 1 -  21539123 a
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               44824 1 -     48001 a
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 27628 1 -     30947 A
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9400 1 -     89868 a
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              13784 1 -     40414 A
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                21673 1 +     72325 a
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193312 1 +  23207421 a
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         3777 1 -     18090 a
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    28348 1 +     34529 A
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    202215 1 -    288883 A
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20275455 1 +  48749331 A
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1128007 1 -   1948126 A
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18086093 1 +  45695690 A
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2822051 1 +   4408762 A
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                102650 1 -    122966 A
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   62155 1 +     81800 A
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31335 1 -     95584 A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55436 1 -    119600 a
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10003858 1 -  17673402 A
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2336330 1 -   7040546 A
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  404628 1 -   1652518 A
i Camelus_ferus.KB017975.1                               C 0 C 0
s Capra_aegagrus.CM003241.1                               18831369 1 +  46296322 a
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18062089 1 -  44709034 a
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    2396 1 -     12242 A
i Capromys_pilorides.CapPil_scaffold_65020               I 6 C 0
s Carlito_syrichta.NW_007259797.1                           156702 1 -    496798 t
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6558 1 -     11696 a
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138684 1 +    179628 A
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     95516 1 +    217609 A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18350877 1 -  23392119 a
i Cavia_aperea.AVPZ01000300.1                            I 16 C 0
s Cavia_porcellus.DS562891.1                              18363140 1 -  23407841 A
i Cavia_porcellus.DS562891.1                             I 16 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                       102022 1 +    143979 A
i Cavia_tschudii.CavTsc_scaffold_8919                    I 16 C 0
s Cephalopachus_bancanus.k141_1423433                         6200 1 +     31688 T
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4478982 1 +   4669795 a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3476 1 +     17872 A
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4071 1 -     14043 A
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12166 1 +     27781 A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12316 1 -     20310 A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15296 1 +     29689 A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10052 1 -     20078 A
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          17967 1 -     27936 A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            6834 1 -     17152 A
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826566 1 +  39242232 A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226070 1 -  21565898 A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43189 1 -     53127 A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3439 1 +     13442 A
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       17985 1 -     27947 A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1014 1 +     10558 A
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4019 1 +     14005 A
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1256 1 -     17098 A
i Cheracebus_lucifer.k141_49986                          C 0 I 1
s Cheracebus_lugens.k141_1393925                              1132 1 +     17877 A
i Cheracebus_lugens.k141_1393925                         C 0 I 1
s Cheracebus_regulus.k141_471822                            158699 1 -    216457 A
i Cheracebus_regulus.k141_471822                         C 0 I 1
s Cheracebus_torquatus.k141_1170026                          63174 1 +     76511 A
i Cheracebus_torquatus.k141_1170026                      C 0 I 1
s Chinchilla_lanigera.JH722012.1                           1254326 1 +   2543920 A
i Chinchilla_lanigera.JH722012.1                         I 6 C 0
s Chiropotes_israelita.k141_747660                           99779 1 +    146308 A
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          31587 1 -     50570 A
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18431889 1 -  18827391 A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18386 1 -     50209 A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425390 1 + 135778131 a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1913891 1 +   2368649 a
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952139 1 + 200372422 A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40416 1 +     84244 A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549434 1 -  53390261 a
i Condylura_cristata.JH655891.1                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 51924 1 +     63868 A
i Cricetomys_gambianus.CriGam_scaffold_18520             I 5 C 0
s Crocidura_indochinensis.CroInd_scaffold_239572              3181 1 -      5012 A
i Crocidura_indochinensis.CroInd_scaffold_239572         I 9 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37356 1 +     51376 C
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 6 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900             1297 1 -     75252 A
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 6 C 0
s Delphinapterus_leucas.KZ290073.1                        16812943 1 +  35494412 a
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8631556 1 +  20541912 a
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37812 1 +     67921 A
i Dinomys_branickii.DinBra_scaffold_21862                I 6 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 34937 1 -     42551 A
i Dolichotis_patagonum.DolPat_scaffold_30833             I 6 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       313137 1 +    607251 a
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          22431 1 -    110024 a
i Ellobius_lutescens.LOEQ01008920.1                      I 3 C 0
s Ellobius_talpinus.LOJH01081419.1                            2351 1 +      8657 a
i Ellobius_talpinus.LOJH01081419.1                       I 3 C 0
s Eptesicus_fuscus.JH977646.1                              2148483 1 -  14770903 a
i Eptesicus_fuscus.JH977646.1                            I 500 C 0
s Erythrocebus_patas.Contig38                             21208562 1 -  21539334 A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12625 1 +    133382 A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             26578 1 -     44125 A
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Fukomys_damarensis.KN121974.1                             851833 1 +   3816255 G
i Fukomys_damarensis.KN121974.1                          I 6 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               3762 1 -      9135 A
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     610379 1 -    660261 a
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            32331 1 +     49224 A
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              19401 1 -     32273 A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341537 1 + 186649187 a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   34020 1 +     78134 A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 19585 1 +     36099 A
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20663623 1 +  22651954 A
i Heterocephalus_glaber.JH602082.1                       I 6 C 0
s Hoolock_leuconedys.ctg274                                    438195 1 +    630532 A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23272 1 -    143317 G
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 6 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84508 1 +    135385 A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7522422 1 -   7955117 a
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                 175 1 -     31341 A
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8278504 1 -   9596543 a
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                  149 1 -     18011 A
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         15832 1 -     38430 A
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    18128 1 -     42476 A
i Lasiurus_borealis.LasBor_scaffold_32767                I 292 C 0
s Lepus_americanus.LepAme_scaffold_107385                     8327 1 -     14121 A
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             269213 1 -    662738 a
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1440524 1 +   1826925 A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                              10334 1 +     40492 A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679588 1 +  60120075 A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16105 1 -     26193 A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            83881 1 -    114318 a
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9572 1 -     23192 A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19036 1 -     29190 A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27614 1 +     37952 A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842691 1 + 187317192 a
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461269 1 -  25927173 a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83470 1 +     89720 A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10463 1 +     20474 A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10260 1 -     14993 A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333122 1 -    668171 A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8572 1 -     24072 A
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29203 1 -     45290 A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92099 1 +     94391 g
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 58
s Mandrillus_leucophaeus.scaffold280                      23940791 1 -  24302211 A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354907 1 +    752769 a
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33104703 1 -  40650429 a
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 34678 1 +    140813 A
i Meriones_unguiculatus.MerUng_scaffold_7390             I 5 C 0
s Mesocricetus_auratus.KB708134.1                         12184137 1 -  29670104 a
i Mesocricetus_auratus.KB708134.1                        I 3 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    4831 1 +     10310 A
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                17307 1 -     19307 a
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11262414 1 -  27267610 a
i Microtus_ochrogaster.CM001695.1                        I 3 I 1
s Miniopterus_natalensis.LDJU01000034.1                    1851711 1 +   8254450 a
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             35395 1 +     64694 A
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                          12467 1 -     28506 A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    28326 1 -    437263 A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 143103 1 -    366855 A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 6
s Moschus_moschiferus.MosMos_scaffold_13123                   2422 1 +     82753 A
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           8447 1 +     14753 A
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84363065 1 - 120012414 a
i Mus_caroli.LT608237.1                                  I 5 C 0
s Mus_musculus.chr8                                       87652566 1 - 129401213 a
i Mus_musculus.chr8                                      I 5 C 0
s Mus_pahari.LT608297.1                                   31357300 1 -  89631738 a
i Mus_pahari.LT608297.1                                  I 5 C 0
s Mus_spretus.CM004101.1                                  90755055 1 - 130317789 a
i Mus_spretus.CM004101.1                                 I 5 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     72578 1 -     80779 G
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 6 C 0
s Myotis_davidii.KB100139.1                                1589500 1 -   6019432 a
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3905590 1 -   4330536 a
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                        1744 1 +      1835 a
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 C 0
s Nannospalax_galili.KL204047.1                            2036856 1 -   3037898 A
i Nannospalax_galili.KL204047.1                          I 6 C 0
s Nasalis_larvatus.k141_413338                               18517 1 +     21681 A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5867290 1 +   7148211 a
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    759296 1 +    783361 A
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Ochotona_princeps.JH802162.1                             1365730 1 +   3988456 a
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          78291 1 -    150152 a
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   27072 1 +     28053 A
i Ondatra_zibethicus.OndZib_scaffold_46174               I 3 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    82081 1 +    102263 A
i Onychomys_torridus.OnyTor_scaffold_2986                I 9 C 0
s Orcinus_orca.KB316932.1                                  2783191 1 -  10937097 a
i Orcinus_orca.KB316932.1                                C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67149227 1 + 174332312 a
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Ovis_aries.CM001607.2                                   17587547 1 +  44047080 a
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      175539 1 -    191736 A
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    47502 1 +     80009 a
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146368 1 + 189151597 a
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1266450 1 -   2937107 a
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183446597 1 + 183742232 a
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10247 1 +     20448 A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567055 1 +  20919399 a
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   8987 1 +     41871 A
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12280 1 +     27711 A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3279 1 -     11374 A
i Papio_ursinus.k141_5274964                             C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18196715 1 -  18517816 a
i Peromyscus_maniculatus.KI615324.1                      I 9 C 0
s Petromus_typicus.PetTyp_scaffold_221660                       51 1 -      2102 A
i Petromus_typicus.PetTyp_scaffold_221660                I 6 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              10247 1 +     63832 A
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            1594 1 +     68526 A
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        41740 1 +     89929 A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43154 1 +     51399 A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299391 1 -  14605196 A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3252 1 +     22620 a
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 44 C 0
s Pithecia_albicans.k141_1476471                              5041 1 +     26961 A
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1186 1 +     23417 A
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                5033 1 +     29694 A
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          30059 1 +     52772 A
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           5055 1 +     26198 A
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3941603 1 +   4542175 A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            5019 1 -     23490 A
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9275 1 -     39866 A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18441 1 +     34906 A
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       22703 1 +     87950 A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23532 1 +     88961 A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9203 1 +     39403 A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          22984 1 -     87928 A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         29943 1 +     60166 A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30140 1 +     67232 A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          25613 1 +     90634 A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          22985 1 -     89403 A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189134513 1 + 189387572 A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9574122 1 +   9816681 a
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76694 1 -     81375 A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8511 1 +     19060 A
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            12319 1 -     21651 a
i Psammomys_obesus.NESX01036370.1                        I 5 C 0
s Pteronotus_parnellii.KE909381.1                            16588 1 -     21811 a
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteropus_alecto.KB030862.1                              22978192 1 +  28871421 g
i Pteropus_alecto.KB030862.1                             I 2 I 44
s Pygathrix_cinerea.k141_1153803                             18503 1 -     91421 A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612626 1 +   7812017 A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18533 1 -     72585 A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  7757 1 +     55207 A
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53572573 1 +  90668790 A
i Rattus_norvegicus.chr16                                I 803 C 0
s Rhinopithecus_bieti.k119_217274                            10201 1 -     11128 A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239569 1 - 195417433 a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675216 1 +   7961872 A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89280 1 -     96226 g
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 28
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154573 1 -    313613 G
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                         3375 1 -     12572 A
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30227 1 +     39453 A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           10735 1 +     27826 A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10276 1 -     19483 A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3574 1 -     12762 A
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3419 1 +     13763 A
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     2213 1 -     30804 A
i Sigmodon_hispidus.SigHis_scaffold_42075                I 3 C 0
s Sorex_araneus.JH798187.1                                13652395 1 -  18376816 A
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1955568 1 -   3870691 a
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Sus_scrofa.CM000828.4                                    6813097 1 +  69701581 a
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                12626 1 +     41958 A
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tarsius_lariang.k141_2201908                               27195 1 +     70052 T
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1992 1 -     16117 T
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186431903 1 + 186847797 a
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106834 1 +    114563 A
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 6 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     82653 1 +    610378 a
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         14313 1 -     20410 A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3436 1 -     12674 A
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14421 1 +     19930 A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      10823 1 -     19997 A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            50965 1 -     60166 A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18427 1 -     27529 A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                         58 1 +      9229 A
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          11961 1 -     21137 A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                      61 1 +      9131 A
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                           25 1 -      3730 A
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28293 1 +     32220 A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942390 1 +   6242583 A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11643 1 +     20839 A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    1664 1 +     27266 A
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tupaia_chinensis.KB320699.1                              2157559 1 +   4065304 a
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15739441 1 +  33153633 a
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54685 1 -     77625 A
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Vicugna_pacos.KN270157.1                                 5373379 1 -   5488506 A
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          2558 1 +    224448 A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      16239 1 +     63895 A
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202 0 +      8798 C
e Galago_senegalensis.k141_631886                             7400 0 +     11339 C
e Galago_moholi.ctg2040                                     429710 0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964 2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445 0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734 0 -     33856 C
e Perodicticus_potto.k141_1186926                              597 0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219 0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 12233 14 -     43706 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851843 11 -   5085361 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   7643 0 +      8208 C
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73921 0 +    116680 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Suricata_suricatta.SurSur_flattened_line_6629              19737 6 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             32458 11 +     97271 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Rhinolophus_sinicus.LVEH01000134.1                        368295 0 -   3329780 C
e Puma_concolor.QAVW01001104.1                            20275712 6 -  38429054 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42002 11 +     42204 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14064 6 -     78924 I
e Panthera_tigris.KE722367.1                               4722643 6 -   8748460 I
e Panthera_pardus.KV860321.1                                265763 6 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  152554 6 +    230217 I
e Otocyon_megalotis.JAEUCK010005147.1                       463788 14 -    559221 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odocoileus_virginianus.KZ100018.1                         145852 291 +    630418 I
e Odobenus_rosmarus.KB229312.1                              508126 11 -   2017862 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869 0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414 0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947 0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9152002 11 -   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                20308984 11 +  31847680 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190536 0 +    196477 C
e Myotis_brandtii.KE162005.1                                280096 2104 -  10118263 I
e Mustela_putorius.JH418006.1                               303189 11 -  14710649 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398 7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7391 11 -      8324 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mellivora_capensis.MelCap_flattened_line_69365             11807 11 +     13704 I
e Megaderma_lyra.MegLyr_scaffold_4542                        14651 0 -    207569 C
e Manis_pentadactyla.KN006162.1                              51623 129 -    317179 I
e Manis_javanica.JSZB01003497.1                              19605 129 +    737560 I
e Lycaon_pictus.CM007581.1                                17958070 11 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Leptonychotes_weddellii.KB714746.1                       3044523 11 +   3914936 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  46439 6 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_101188                404 0 +      9903 C
e Hipposideros_armiger.JXIK01000431.1                       111834 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Helogale_parvula.HelPar_flattened_line_2585               243742 6 +    327341 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689 0 +     41679 C
e Felis_nigripes.FelNig_flattened_line_20823                 10943 6 -     36744 I
e Felis_catus_fca126.CM031415.1                           20197189 6 + 205367284 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Enhydra_lutris.KZ291758.1                               16331088 11 -  41312741 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64769 0 +   2246927 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             29904 6 -     87169 I
e Cricetulus_griseus.LT883664.1                           11668671 0 + 224834208 C
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           1799 0 +     23735 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1750 0 -      8501 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Canis_lupus_orion.HG994398.1                            18503132 11 +  63665305 I
e Canis_lupus_familiaris.chr16                            17961830 11 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9037361 11 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     2659 11 -     43241 I
e CanFam4.chr16                                           17801918 11 -  60362399 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538 0 +      5281 C
e Ailurus_fulgens.LNAC01001112.1                             81198 11 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512040 11 -  29979442 I
e Acinonyx_jubatus.LLWD01001279.1                           828705 6 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      10157 1 +     62944 T
s Acomys_cahirinus.AcoCah_scaffold_12655                     72671 1 +     87051 T
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     75771 1 -     89534 T
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   18020 1 -     52922 T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         17957 1 -     28001 t
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8452 1 -     18505 t
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9305 1 -     12518 T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              9768 1 +     51355 c
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                2873 1 -     36483 c
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13328 1 +     28687 c
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 1798 1 +     27940 c
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            2877 1 -      9457 c
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             1835 1 +     30492 c
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              5828 1 +     47717 t
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              2565 1 +      5663 c
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             17017 1 +     50774 c
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          677264 1 -   2318259 t
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      186811 1 +    412891 t
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 212
s Antilocapra_americana.AntAmePen_scaffold_12469             99737 1 -    100397 T
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      14087 1 +     20879 C
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6217 1 +     43469 t
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 212
s Ateles_geoffroyi_b.tarseq_1536                             21210029 1 -  21539123 c
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               44825 1 -     48001 c
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 27629 1 -     30947 C
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9401 1 -     89868 c
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              13785 1 -     40414 C
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                21674 1 +     72325 c
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193313 1 +  23207421 t
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         3778 1 -     18090 t
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    28349 1 +     34529 T
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    202216 1 -    288883 T
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20275456 1 +  48749331 T
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1128008 1 -   1948126 T
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18086094 1 +  45695690 T
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2822052 1 +   4408762 T
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                102651 1 -    122966 C
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   62156 1 +     81800 C
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31336 1 -     95584 C
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55437 1 -    119600 c
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10003859 1 -  17673402 G
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2336331 1 -   7040546 G
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  404629 1 -   1652518 A
i Camelus_ferus.KB017975.1                               C 0 C 0
s Capra_aegagrus.CM003241.1                               18831370 1 +  46296322 t
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18062090 1 -  44709034 t
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    2397 1 -     12242 T
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           156703 1 -    496798 t
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6559 1 -     11696 t
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 213
s Castor_canadensis.CasCan_scaffold_2074                    138685 1 +    179628 T
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     95517 1 +    217609 T
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18350878 1 -  23392119 t
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18363141 1 -  23407841 T
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                       102023 1 +    143979 T
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         6201 1 +     31688 T
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4478983 1 +   4669795 t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3477 1 +     17872 T
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4072 1 -     14043 T
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12167 1 +     27781 T
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12317 1 -     20310 T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15297 1 +     29689 T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10053 1 -     20078 T
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          17968 1 -     27936 T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            6835 1 -     17152 T
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826567 1 +  39242232 T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226071 1 -  21565898 T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43190 1 -     53127 T
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3440 1 +     13442 T
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       17986 1 -     27947 T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1015 1 +     10558 T
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4020 1 +     14005 T
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254327 1 +   2543920 T
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_israelita.k141_747660                           99780 1 +    146308 C
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          31588 1 -     50570 C
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18431890 1 -  18827391 T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18387 1 -     50209 T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425391 1 + 135778131 t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1913892 1 +   2368649 t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952140 1 + 200372422 T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40417 1 +     84244 T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549435 1 -  53390261 t
i Condylura_cristata.JH655891.1                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 51925 1 +     63868 T
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_239572              3182 1 -      5012 G
i Crocidura_indochinensis.CroInd_scaffold_239572         C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37357 1 +     51376 T
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900             1298 1 -     75252 T
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16812944 1 +  35494412 t
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8631557 1 +  20541912 t
i Desmodus_rotundus.KZ672289.1                           C 0 I 213
s Dinomys_branickii.DinBra_scaffold_21862                    37813 1 +     67921 T
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 34938 1 -     42551 T
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       313138 1 +    607251 t
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          22432 1 -    110024 t
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                            2352 1 +      8657 t
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2148484 1 -  14770903 t
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Erythrocebus_patas.Contig38                             21208563 1 -  21539334 T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12626 1 +    133382 T
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             26579 1 -     44125 T
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Fukomys_damarensis.KN121974.1                             851834 1 +   3816255 T
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               3763 1 -      9135 T
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     610380 1 -    660261 t
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            32332 1 +     49224 T
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              19402 1 -     32273 T
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341538 1 + 186649187 t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   34021 1 +     78134 C
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 19586 1 +     36099 T
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20663624 1 +  22651954 T
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hoolock_leuconedys.ctg274                                    438196 1 +    630532 T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23273 1 -    143317 T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84509 1 +    135385 T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7522423 1 -   7955117 c
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                 176 1 -     31341 T
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8278505 1 -   9596543 t
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                  150 1 -     18011 T
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         15833 1 -     38430 C
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    18129 1 -     42476 G
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     8328 1 -     14121 T
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             269214 1 -    662738 t
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1440525 1 +   1826925 T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                              10335 1 +     40492 T
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679589 1 +  60120075 T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16106 1 -     26193 T
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            83882 1 -    114318 t
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9573 1 -     23192 T
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19037 1 -     29190 T
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27615 1 +     37952 T
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842692 1 + 187317192 t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461270 1 -  25927173 t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83471 1 +     89720 T
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10464 1 +     20474 T
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10261 1 -     14993 T
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333123 1 -    668171 T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8573 1 -     24072 T
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29204 1 -     45290 T
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92158 1 +     94391 t
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 58 C 0
s Mandrillus_leucophaeus.scaffold280                      23940792 1 -  24302211 T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354908 1 +    752769 t
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33104704 1 -  40650429 c
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 34679 1 +    140813 T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    4832 1 +     10310 T
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                17308 1 -     19307 t
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 213
s Miniopterus_natalensis.LDJU01000034.1                    1851712 1 +   8254450 g
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             35396 1 +     64694 G
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                          12468 1 -     28506 T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    28327 1 -    437263 T
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 143110 1 -    366855 T
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 6 I 2
s Moschus_moschiferus.MosMos_scaffold_13123                   2423 1 +     82753 T
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           8448 1 +     14753 T
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84363066 1 - 120012414 t
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87652567 1 - 129401213 t
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31357301 1 -  89631738 t
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90755056 1 - 130317789 t
i Mus_spretus.CM004101.1                                 C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     72579 1 -     80779 T
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_davidii.KB100139.1                                1589501 1 -   6019432 t
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3905591 1 -   4330536 t
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                        1745 1 +      1835 t
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 C 0
s Nannospalax_galili.KL204047.1                            2036857 1 -   3037898 T
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               18518 1 +     21681 T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5867291 1 +   7148211 t
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    759297 1 +    783361 T
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 2
s Ochotona_princeps.JH802162.1                             1365731 1 +   3988456 t
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          78292 1 -    150152 t
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   27073 1 +     28053 T
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    82082 1 +    102263 T
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2783192 1 -  10937097 t
i Orcinus_orca.KB316932.1                                C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67149228 1 + 174332312 t
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Ovis_aries.CM001607.2                                   17587548 1 +  44047080 t
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      175540 1 -    191736 T
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    47503 1 +     80009 t
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146369 1 + 189151597 t
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1266451 1 -   2937107 t
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183446598 1 + 183742232 t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10248 1 +     20448 T
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567056 1 +  20919399 t
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   8988 1 +     41871 T
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12281 1 +     27711 T
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3280 1 -     11374 T
i Papio_ursinus.k141_5274964                             C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18196716 1 -  18517816 t
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_221660                       52 1 -      2102 T
i Petromus_typicus.PetTyp_scaffold_221660                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              10248 1 +     63832 T
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            1595 1 +     68526 T
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        41741 1 +     89929 T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43155 1 +     51399 T
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299392 1 -  14605196 T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3253 1 +     22620 g
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pithecia_albicans.k141_1476471                              5042 1 +     26961 C
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1187 1 +     23417 C
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                5034 1 +     29694 C
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          30060 1 +     52772 C
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           5056 1 +     26198 C
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3941604 1 +   4542175 C
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            5020 1 -     23490 C
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9276 1 -     39866 C
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18442 1 +     34906 C
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       22704 1 +     87950 C
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23533 1 +     88961 C
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9204 1 +     39403 C
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          22985 1 -     87928 C
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         29944 1 +     60166 C
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30141 1 +     67232 C
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          25614 1 +     90634 C
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          22986 1 -     89403 C
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189134514 1 + 189387572 T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9574123 1 +   9816681 t
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76695 1 -     81375 T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8512 1 +     19060 T
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            12320 1 -     21651 t
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            16589 1 -     21811 t
i Pteronotus_parnellii.KE909381.1                        C 0 I 2
s Pteropus_alecto.KB030862.1                              22978237 1 +  28871421 t
i Pteropus_alecto.KB030862.1                             I 44 C 0
s Pygathrix_cinerea.k141_1153803                             18504 1 -     91421 T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612627 1 +   7812017 T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18534 1 -     72585 T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  7758 1 +     55207 T
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53572574 1 +  90668790 T
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                            10202 1 -     11128 T
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239570 1 - 195417433 t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675217 1 +   7961872 T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89309 1 -     96226 c
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 28 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154574 1 -    313613 T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                         3376 1 -     12572 T
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30228 1 +     39453 T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           10736 1 +     27826 T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10277 1 -     19483 T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3575 1 -     12762 T
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3420 1 +     13763 T
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     2214 1 -     30804 T
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Sorex_araneus.JH798187.1                                13652396 1 -  18376816 G
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1955569 1 -   3870691 c
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Sus_scrofa.CM000828.4                                    6813098 1 +  69701581 t
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                12627 1 +     41958 T
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tarsius_lariang.k141_2201908                               27196 1 +     70052 T
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1993 1 -     16117 T
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186431904 1 + 186847797 t
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106835 1 +    114563 T
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     82654 1 +    610378 t
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 212
s Trachypithecus_auratus.k141_722599                         14314 1 -     20410 T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3437 1 -     12674 T
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14422 1 +     19930 T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      10824 1 -     19997 T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            50966 1 -     60166 T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18428 1 -     27529 T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                         59 1 +      9229 T
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          11962 1 -     21137 T
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                      62 1 +      9131 T
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                           26 1 -      3730 T
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28294 1 +     32220 T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942391 1 +   6242583 T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11644 1 +     20839 T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    1665 1 +     27266 T
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tupaia_chinensis.KB320699.1                              2157560 1 +   4065304 c
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15739442 1 +  33153633 t
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54686 1 -     77625 T
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Vicugna_pacos.KN270157.1                                 5373380 1 -   5488506 G
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          2559 1 +    224448 T
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      16240 1 +     63895 T
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Cheracebus_torquatus.k141_1170026                          63175 1 +     76511 I
e Cheracebus_regulus.k141_471822                            158700 1 -    216457 I
e Cheracebus_lugens.k141_1393925                              1133 1 +     17877 I
e Cheracebus_lucifer.k141_49986                               1257 1 -     17098 I
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202 0 +      8798 C
e Galago_senegalensis.k141_631886                             7400 0 +     11339 C
e Galago_moholi.ctg2040                                     429710 0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964 2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445 0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734 0 -     33856 C
e Perodicticus_potto.k141_1186926                              597 0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219 0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 12233 14 -     43706 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851843 11 -   5085361 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   7643 0 +      8208 C
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73921 0 +    116680 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Suricata_suricatta.SurSur_flattened_line_6629              19737 6 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             32458 11 +     97271 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Rhinolophus_sinicus.LVEH01000134.1                        368295 0 -   3329780 C
e Puma_concolor.QAVW01001104.1                            20275712 6 -  38429054 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42002 11 +     42204 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14064 6 -     78924 I
e Panthera_tigris.KE722367.1                               4722643 6 -   8748460 I
e Panthera_pardus.KV860321.1                                265763 6 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  152554 6 +    230217 I
e Otocyon_megalotis.JAEUCK010005147.1                       463788 14 -    559221 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odocoileus_virginianus.KZ100018.1                         145852 291 +    630418 I
e Odobenus_rosmarus.KB229312.1                              508126 11 -   2017862 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869 0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414 0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947 0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9152002 11 -   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                20308984 11 +  31847680 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190536 0 +    196477 C
e Myotis_brandtii.KE162005.1                                280096 2104 -  10118263 I
e Mustela_putorius.JH418006.1                               303189 11 -  14710649 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398 7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7391 11 -      8324 I
e Microtus_ochrogaster.CM001695.1                         11262415 1 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184138 0 -  29670104 C
e Mellivora_capensis.MelCap_flattened_line_69365             11807 11 +     13704 I
e Megaderma_lyra.MegLyr_scaffold_4542                        14651 0 -    207569 C
e Manis_pentadactyla.KN006162.1                              51623 129 -    317179 I
e Manis_javanica.JSZB01003497.1                              19605 129 +    737560 I
e Lycaon_pictus.CM007581.1                                17958070 11 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Leptonychotes_weddellii.KB714746.1                       3044523 11 +   3914936 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  46439 6 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_101188                404 0 +      9903 C
e Hipposideros_armiger.JXIK01000431.1                       111834 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Helogale_parvula.HelPar_flattened_line_2585               243742 6 +    327341 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689 0 +     41679 C
e Felis_nigripes.FelNig_flattened_line_20823                 10943 6 -     36744 I
e Felis_catus_fca126.CM031415.1                           20197189 6 + 205367284 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Enhydra_lutris.KZ291758.1                               16331088 11 -  41312741 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64769 0 +   2246927 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             29904 6 -     87169 I
e Cricetulus_griseus.LT883664.1                           11668671 0 + 224834208 C
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           1799 0 +     23735 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1750 0 -      8501 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Canis_lupus_orion.HG994398.1                            18503132 11 +  63665305 I
e Canis_lupus_familiaris.chr16                            17961830 11 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9037361 11 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     2659 11 -     43241 I
e CanFam4.chr16                                           17801918 11 -  60362399 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538 0 +      5281 C
e Ailurus_fulgens.LNAC01001112.1                             81198 11 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512040 11 -  29979442 I
e Acinonyx_jubatus.LLWD01001279.1                           828705 6 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      10158  3 +     62944 A-C--------A
s Acinonyx_jubatus.LLWD01001279.1                           828711  1 -   1699592 -----------t
i Acinonyx_jubatus.LLWD01001279.1                        I 6 I 53
s Acomys_cahirinus.AcoCah_scaffold_12655                     72672  3 +     87051 A-A--------A
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9512051  1 -  29979442 -----------t
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 11 T 224
s Ailurus_fulgens.LNAC01001112.1                             81209  1 -    347723 -----------t
i Ailurus_fulgens.LNAC01001112.1                         I 11 T 308
s Allactaga_bullata.AllBul_scaffold_9566                     75772  3 -     89534 A-C--------A
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   18021  3 -     52922 A-C--------A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         17958  3 -     28001 a-c--------a
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8453  3 -     18505 a-c--------a
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9306  3 -     12518 A-C--------A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              9769  3 +     51355 a-c--------a
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                2874  3 -     36483 a-c--------a
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13329  3 +     28687 a-c--------a
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 1799  3 +     27940 a-c--------a
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            2878  3 -      9457 a-c--------a
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             1836  3 +     30492 a-c--------a
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              5829  3 +     47717 a-c--------a
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              2566  3 +      5663 a-c--------a
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             17018  3 +     50774 a-c--------a
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          677265  4 -   2318259 t-c-------tt
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 211
s Anoura_caudifer.AnoCau_scaffold_1412                      187024  1 +    412891 -----------a
i Anoura_caudifer.AnoCau_scaffold_1412                   I 212 I 5
s Antilocapra_americana.AntAmePen_scaffold_12469             99738  4 -    100397 T-C-----T--T
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 I 213
s Aplodontia_rufa.AprRuf_scaffold_68852                      14088  3 +     20879 A-T--------A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6430  1 +     43469 -----------a
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 212 I 5
s Ateles_geoffroyi_b.tarseq_1536                             21210030  3 -  21539123 a-c--------a
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               44826  3 -     48001 a-c--------a
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 27630  3 -     30947 A-C--------A
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9402  3 -     89868 a-c--------a
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              13786  3 -     40414 A-C--------A
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                21675  3 +     72325 a-c--------a
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193314  4 +  23207421 t-c-------tt
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 10
s Balaenoptera_bonaerensis.DF707048.1                         3779  4 -     18090 t-c-------tt
i Balaenoptera_bonaerensis.DF707048.1                    C 0 I 10
s Beatragus_hunteri.BeaHun_scaffold_50177                    28350  4 +     34529 T-C-----T--T
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 211
s Bison_bison.KN261452.1                                    202217  4 -    288883 T-C-----T--A
i Bison_bison.KN261452.1                                 C 0 I 346
s Bos_indicus.CM003047.1                                  20275457  4 +  48749331 T-C-----T--A
i Bos_indicus.CM003047.1                                 C 0 I 346
s Bos_mutus.JH880303.1                                     1128009  4 -   1948126 T-C-----T--A
i Bos_mutus.JH880303.1                                   C 0 I 347
s Bos_taurus.CM000203.6                                   18086095  4 +  45695690 T-C-----T--A
i Bos_taurus.CM000203.6                                  C 0 I 346
s Bubalus_bubalis.KI419123.1                               2822053  4 +   4408762 T-C-----T--A
i Bubalus_bubalis.KI419123.1                             C 0 I 348
s Cacajao_ayresi.k141_552049                                102652  3 -    122966 A-C--------A
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   62157  2 +     81800 A-C---------
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31337  3 -     95584 A-C--------A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55438  3 -    119600 a-c--------a
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10003860  4 -  17673402 C-C-----T--T
i Camelus_bactrianus.KN276810.1                          C 0 I 1
s Camelus_dromedarius.KN272107.1                           2336332  4 -   7040546 C-C-----T--T
i Camelus_dromedarius.KN272107.1                         C 0 I 1
s Camelus_ferus.KB017975.1                                  404630  4 -   1652518 C-C-----T--T
i Camelus_ferus.KB017975.1                               C 0 I 1
s CanFam4.chr16                                           17801929  1 -  60362399 -----------G
i CanFam4.chr16                                          I 11 T 1119
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     2670  1 -     43241 -----------G
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 11 T 1117
s Canis_lupus_dingo.QKWQ01000480.1                         9037372  1 -   9314153 -----------g
i Canis_lupus_dingo.QKWQ01000480.1                       I 11 T 1119
s Canis_lupus_familiaris.chr16                            17961841  1 -  59632846 -----------g
i Canis_lupus_familiaris.chr16                           I 11 T 1117
s Canis_lupus_orion.HG994398.1                            18503143  1 +  63665305 -----------g
i Canis_lupus_orion.HG994398.1                           I 11 T 1117
s Capra_aegagrus.CM003241.1                               18831371  4 +  46296322 t-c-------tt
i Capra_aegagrus.CM003241.1                              C 0 I 211
s Capra_hircus.CM004588.1                                 18062091  4 -  44709034 t-c-------tt
i Capra_hircus.CM004588.1                                C 0 I 211
s Carlito_syrichta.NW_007259797.1                           156704  3 -    496798 t-t--------a
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6773  1 -     11696 -----------a
i Carollia_perspicillata.CarPer_scaffold_92756           I 213 I 5
s Castor_canadensis.CasCan_scaffold_2074                    138686  3 +    179628 G-C--------A
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     95518  4 +    217609 T-C-----T--T
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 7
s Cephalopachus_bancanus.k141_1423433                         6202  3 +     31688 T-T--------A
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4478984  3 +   4669795 a-c--------a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3478  3 +     17872 A-C--------A
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4073  3 -     14043 A-C--------A
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12168  3 +     27781 A-C--------A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12318  3 -     20310 A-C--------A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15298  3 +     29689 A-C--------A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10054  3 -     20078 A-C--------A
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          17969  3 -     27936 A-C--------A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            6836  3 -     17152 A-C--------A
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826568  3 +  39242232 A-C--------A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226072  3 -  21565898 A-C--------A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43191  3 -     53127 A-C--------A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3441  3 +     13442 A-C--------A
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       17987  3 -     27947 A-C--------A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1016  3 +     10558 A-C--------A
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4021  3 +     14005 A-C--------A
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1258  1 -     17098 -----------A
i Cheracebus_lucifer.k141_49986                          I 1 C 0
s Cheracebus_lugens.k141_1393925                              1134  1 +     17877 -----------A
i Cheracebus_lugens.k141_1393925                         I 1 C 0
s Cheracebus_regulus.k141_471822                            158701  1 -    216457 -----------A
i Cheracebus_regulus.k141_471822                         I 1 C 0
s Cheracebus_torquatus.k141_1170026                          63176  1 +     76511 -----------A
i Cheracebus_torquatus.k141_1170026                      I 1 C 0
s Chiropotes_israelita.k141_747660                           99781  3 +    146308 A-C--------A
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          31589  3 -     50570 A-C--------A
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18431891  3 -  18827391 A-C--------A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18388  3 -     50209 A-C--------A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425392  3 + 135778131 a-c--------a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1913893  3 +   2368649 a-c--------a
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952141  3 + 200372422 A-C--------A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40418  3 +     84244 A-C--------A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549436  4 -  53390261 aaa--------a
i Condylura_cristata.JH655891.1                          C 0 I 5
s Cricetomys_gambianus.CriGam_scaffold_18520                 51926  3 +     63868 A-C--------A
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_239572              3183  4 -      5012 ACT--------T
i Crocidura_indochinensis.CroInd_scaffold_239572         C 0 I 5
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29910  1 -     87169 -----------t
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 6 I 33
s Delphinapterus_leucas.KZ290073.1                        16812945  4 +  35494412 t-c-------tt
i Delphinapterus_leucas.KZ290073.1                       C 0 I 10
s Desmodus_rotundus.KZ672289.1                             8631771  1 +  20541912 -----------A
i Desmodus_rotundus.KZ672289.1                           I 213 I 5
s Elaphurus_davidianus.JRFZ01104969.1                       313139  4 +    607251 t-c-------tt
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 210
s Ellobius_lutescens.LOEQ01008920.1                          22433  3 -    110024 a-c--------a
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                            2353  3 +      8657 a-c--------a
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16331099  1 -  41312741 -----------t
i Enhydra_lutris.KZ291758.1                              I 11 T 241
s Eptesicus_fuscus.JH977646.1                              2148485  2 -  14770903 a-t---------
i Eptesicus_fuscus.JH977646.1                            C 0 I 8
s Erythrocebus_patas.Contig38                             21208564  3 -  21539334 A-C--------A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12627  4 +    133382 T-C-----T--T
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 10
s Eubalaena_japonica.EubJap_flattened_line_31514             26580  4 -     44125 T-C-----T--T
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 I 10
s Felis_catus.CM001381.2                                  20238352  1 + 206538554 -----------t
i Felis_catus.CM001381.2                                 I 6 I 135
s Felis_catus_fca126.CM031415.1                           20197195  1 + 205367284 -----------t
i Felis_catus_fca126.CM031415.1                          I 6 I 155
s Felis_nigripes.FelNig_flattened_line_20823                 10949  1 -     36744 -----------t
i Felis_nigripes.FelNig_flattened_line_20823             I 6 I 79
s Galeopterus_variegatus.GalVar_scaffold_108840               3764  3 -      9135 G-T--------A
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     610381  4 -    660261 t-c-------tt
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 I 211
s Glis_glis.GliGli_scaffold_19807                            32333  3 +     49224 A-C--------A
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              19403  3 -     32273 A-T--------A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341539  3 + 186649187 a-c--------a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   34022  3 +     78134 A-C--------A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243748  1 +    327341 -----------T
i Helogale_parvula.HelPar_flattened_line_2585            I 6 I 16
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 19587  4 +     36099 T-C-----T--T
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 I 211
s Hoolock_leuconedys.ctg274                                    438197  3 +    630532 A-C--------A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46445  1 +     55795 -----------T
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 6 I 48
s Hystrix_cristata.HysCri_scaffold_5660                      84510  3 +    135385 G-C--------A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7522424  3 -   7955117 a-c--------a
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                 177  4 -     31341 T-C-----T--T
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 I 10
s Jaculus_jaculus.JH725527.1                               8278506  3 -   9596543 a-c--------a
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                  151  4 -     18011 T-C-----T--T
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 I 10
s Lagothrix_lagothricha.k141_1005387                         15834  3 -     38430 A-C--------A
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3044534  1 +   3914936 -----------t
i Leptonychotes_weddellii.KB714746.1                     I 11 T 225
s Lasiurus_borealis.LasBor_scaffold_32767                    18130  2 -     42476 A-G---------
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 8
s Lepus_americanus.LepAme_scaffold_107385                     8329  3 -     14121 G-C--------A
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             269215  4 -    662738 t-c-------tt
i Lipotes_vexillifer.KE559953.1                          C 0 I 10
s Lophocebus_aterrimus.ctg367                              1440526  3 +   1826925 A-C--------A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17958081  1 -  59628241 -----------g
i Lycaon_pictus.CM007581.1                               I 11 T 1117
s Macaca_arctoides.k141_2326796                              10336  3 +     40492 A-C--------A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679590  3 +  60120075 A-C--------A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16107  3 -     26193 A-C--------A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            83883  3 -    114318 a-c--------a
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9574  3 -     23192 A-C--------A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19038  3 -     29190 A-C--------A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27616  3 +     37952 A-C--------A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842693  3 + 187317192 a-c--------a
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461271  3 -  25927173 a-c--------a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83472  3 +     89720 A-C--------A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10465  3 +     20474 A-C--------A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10262  3 -     14993 A-C--------A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333124  3 -    668171 A-C--------A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8574  3 -     24072 A-C--------A
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29205  3 -     45290 A-C--------A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92159  1 +     94391 -----------g
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 5
s Mandrillus_leucophaeus.scaffold280                      23940793  3 -  24302211 A-C--------A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354909  3 +    752769 a-c--------a
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33104705  3 -  40650429 a-c--------a
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             11818  1 +     13704 -----------t
i Mellivora_capensis.MelCap_flattened_line_69365         I 11 T 248
s Meriones_unguiculatus.MerUng_scaffold_7390                 34680  3 +    140813 A-C--------A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12184138  2 -  29670104 --c--------a
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    4833  4 +     10310 T-C-----T--T
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 I 10
s Micronycteris_hirsuta.MicHir_scaffold_52381                17522  1 -     19307 -----------a
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 213 I 5
s Microtus_ochrogaster.CM001695.1                         11262416  1 -  27267610 -----------a
i Microtus_ochrogaster.CM001695.1                        I 1 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1851713  2 +   8254450 a-g---------
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 8
s Miniopterus_schreibersii.MinSch_scaffold_18080             35397  2 +     64694 A-G---------
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 8
s Miopithecus_ogouensis.k141_534055                          12469  3 -     28506 A-C--------A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         7402  1 -      8324 -----------t
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 11 T 226
s Monodon_monoceros.MonMon_M_scaffold_103                    28328  4 -    437263 T-C-----T--T
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 10
s Mormoops_blainvillei.MorMeg_scaffold_1417                 143113  1 -    366855 -----------A
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 2 I 5
s Moschus_moschiferus.MosMos_scaffold_13123                   2424  2 +     82753 T-C---------
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 213
s Murina_feae.MurFea_scaffold_85699                           8449  2 +     14753 A-T---------
i Murina_feae.MurFea_scaffold_85699                      C 0 I 8
s Mus_caroli.LT608237.1                                   84363067  3 - 120012414 a-c--------a
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87652568  3 - 129401213 a-c--------a
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31357302  3 -  89631738 a-c--------a
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90755057  3 - 130317789 a-c--------a
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                               303200  1 -  14710649 -----------t
i Mustela_putorius.JH418006.1                            I 11 T 235
s Myotis_davidii.KB100139.1                                1589502  2 -   6019432 a-t---------
i Myotis_davidii.KB100139.1                              C 0 I 8
s Myotis_lucifugus.GL429869.1                              3905592  2 -   4330536 a-t---------
i Myotis_lucifugus.GL429869.1                            C 0 I 38
s Myotis_myotis.MyoMyo_scaffold_281845                        1746  2 +      1835 a-t---------
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 I 54
s Nannospalax_galili.KL204047.1                            2036858  3 -   3037898 A-C--------A
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               18519  3 +     21681 A-C--------A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308995  1 +  31847680 -----------t
i Neomonachus_schauinslandi.NINY01007730.1               I 11 T 226
s Neophocaena_asiaeorientalis.KZ687982.1                   5867292  4 +   7148211 t-c-------tt
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 10
s Noctilio_leporinus.NocLep_scaffold_251                    759300  1 +    783361 -----------A
i Noctilio_leporinus.NocLep_scaffold_251                 I 2 I 5
s Nyctereutes_procyonoides.CAJHUB010000658.1               9152013  1 -   9404916 -----------g
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 11 T 1112
s Ochotona_princeps.JH802162.1                             1365732  3 +   3988456 a-t--------a
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              508137  1 -   2017862 -----------t
i Odobenus_rosmarus.KB229312.1                           I 11 T 226
s Okapia_johnstoni.LVCL01S0005463.1                          78293  4 -    150152 t-c-------tt
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 200
s Ondatra_zibethicus.OndZib_scaffold_46174                   27074  3 +     28053 A-C--------A
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    82083  3 +    102263 A-C--------A
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2783193  4 -  10937097 t-c-------tt
i Orcinus_orca.KB316932.1                                C 0 I 10
s Oryctolagus_cuniculus.CM000791.1                        67149229  3 + 174332312 g-c--------a
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       463802  1 -    559221 -----------t
i Otocyon_megalotis.JAEUCK010005147.1                    I 14 I 189
s Ovis_aries.CM001607.2                                   17587549  4 +  44047080 t-c-------tt
i Ovis_aries.CM001607.2                                  C 0 I 211
s Ovis_canadensis.OviCan_scaffold_2572                      175541  4 -    191736 T-C-----T--T
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 I 211
s Pan_paniscus.KQ411613.1                                    47504  3 +     80009 a-c--------a
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146370  3 + 189151597 a-c--------a
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152560  1 +    230217 -----------T
i Panthera_onca.PanOnc_flattened_line_3271               I 6 I 29
s Panthera_pardus.KV860321.1                                265769  1 +  18783137 -----------t
i Panthera_pardus.KV860321.1                             I 6 I 55
s Panthera_tigris.KE722367.1                               4722649  1 -   8748460 -----------t
i Panthera_tigris.KE722367.1                             I 6 I 55
s Pantholops_hodgsonii.KE114653.1                          1266452  4 -   2937107 t-c-------tt
i Pantholops_hodgsonii.KE114653.1                        C 0 I 209
s Papio_anubis.CM001495.2                                183446599  3 + 183742232 a-c--------a
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10249  3 +     20448 A-C--------A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567057  3 +  20919399 a-c--------a
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   8989  3 +     41871 A-C--------A
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12282  3 +     27711 A-C--------A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3281  3 -     11374 A-C--------A
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14070  1 -     78924 -----------T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 6 I 3
s Peromyscus_maniculatus.KI615324.1                       18196717  3 -  18517816 a-t--------a
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              10249  4 +     63832 T-C-----T--T
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 10
s Piliocolobus_badius.k141_1142974                            1596  3 +     68526 A-C--------A
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        41742  3 +     89929 A-C--------A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43156  3 +     51399 A-C--------A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299393  3 -  14605196 A-C--------A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3254  2 +     22620 a-g---------
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 8
s Pithecia_albicans.k141_1476471                              5043  3 +     26961 A-C--------A
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1188  3 +     23417 A-C--------A
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                5035  3 +     29694 A-C--------A
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          30061  3 +     52772 A-C--------A
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           5057  3 +     26198 A-C--------A
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3941605  3 +   4542175 A-C--------A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            5021  3 -     23490 A-C--------A
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9277  5 -     39866 A-CA------CA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18443  5 +     34906 A-CA------CA
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       22705  5 +     87950 A-CA------CA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23534  5 +     88961 A-CA------CA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9205  5 +     39403 A-CA------CA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          22986  5 -     87928 A-CA------CA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         29945  5 +     60166 A-CA------CA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30142  5 +     67232 A-CA------CA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          25615  5 +     90634 A-CA------CA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          22987  5 -     89403 A-CA------CA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189134515  3 + 189387572 A-C--------A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9574124  3 +   9816681 a-c--------a
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76696  3 -     81375 A-C--------A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8513  3 +     19060 A-C--------A
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            12321  3 -     21651 a-c--------a
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            16592  1 -     21811 -----------a
i Pteronotus_parnellii.KE909381.1                        I 2 I 5
s Pteronura_brasiliensis.PteBra_flattened_line_31117         42013  1 +     42204 -----------t
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 11 T 241
s Pteropus_alecto.KB030862.1                              22978238  1 +  28871421 -----------a
i Pteropus_alecto.KB030862.1                             C 0 I 5
s Puma_concolor.QAVW01001104.1                            20275718  1 -  38429054 -----------t
i Puma_concolor.QAVW01001104.1                           I 6 I 59
s Pygathrix_cinerea.k141_1153803                             18505  3 -     91421 A-C--------A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612628  3 +   7812017 A-C--------A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18535  3 -     72585 A-C--------A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  7759  4 +     55207 T-C-----T--T
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 211
s Rattus_norvegicus.chr16                                 53572575  3 +  90668790 A-C--------A
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                            10203  3 -     11128 A-C--------A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239571  3 - 195417433 a-c--------a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675218  3 +   7961872 A-C--------A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89310  1 -     96226 -----------a
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 5
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154575  4 -    313613 AAA--------A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 5
s Semnopithecus_entellus.k141_1672505                         3377  3 -     12572 A-C--------A
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30229  3 +     39453 A-C--------A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           10737  3 +     27826 A-C--------A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10278  3 -     19483 A-C--------A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3576  3 -     12762 A-C--------A
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3421  3 +     13763 A-C--------A
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     2215  5 -     30804 A-CA------CA
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Sorex_araneus.JH798187.1                                13652397  6 -  18376816 ACA------cac
i Sorex_araneus.JH798187.1                               C 0 I 9
s Spermophilus_dauricus.KZ294078.1                         1955570  3 -   3870691 a-c--------a
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             32469  1 +     97271 -----------t
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 11 T 223
s Suricata_suricatta.SurSur_flattened_line_6629              19743  1 -    196729 -----------T
i Suricata_suricatta.SurSur_flattened_line_6629          I 6 I 20
s Sus_scrofa.CM000828.4                                    6813099  4 +  69701581 t-c-------tt
i Sus_scrofa.CM000828.4                                  C 0 I 7
s Tadarida_brasiliensis.TadBra_scaffold_25820                12628 11 +     41958 A-GAGAGATATA
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 5
s Tarsius_lariang.k141_2201908                               27197  3 +     70052 T-T--------A
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1994  3 -     16117 T-T--------A
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186431905  3 + 186847797 a-c--------a
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     82867  1 +    610378 -----------a
i Tonatia_saurophila.TonSau_scaffold_294                 I 212 I 5
s Trachypithecus_auratus.k141_722599                         14315  3 -     20410 A-C--------A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3438  3 -     12674 A-C--------A
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14423  3 +     19930 A-C--------A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      10825  3 -     19997 A-C--------A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            50967  3 -     60166 A-C--------A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18429  3 -     27529 A-C--------A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                         60  3 +      9229 A-C--------A
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          11963  3 -     21137 A-C--------A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                      63  3 +      9131 A-C--------A
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                           27  3 -      3730 A-C--------A
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28295  3 +     32220 A-C--------A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942392  3 +   6242583 A-C--------A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11645  3 +     20839 A-C--------A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    1666  4 +     27266 T-C-----T--T
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 I 232
s Tupaia_chinensis.KB320699.1                              2157561  3 +   4065304 a-c--------a
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15739443  4 +  33153633 t-c-------tt
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 1
s Uropsilus_gracilis.UroGra_scaffold_12083                   54687  4 -     77625 TAA--------A
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 5
s Ursus_maritimus.KK499267.1                               4851854  1 -   5085361 -----------t
i Ursus_maritimus.KK499267.1                             I 11 T 225
s Vicugna_pacos.KN270157.1                                 5373381  4 -   5488506 C-C-----T--T
i Vicugna_pacos.KN270157.1                               C 0 I 1
s Vulpes_lagopus.VulLag_flattened_line_30954                 12247  1 -     43706 -----------T
i Vulpes_lagopus.VulLag_flattened_line_30954             I 14 I 182
s Xerus_inauris.XerIna_scaffold_2302                          2560  3 +    224448 A-T--------G
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      16241  3 +     63895 A-C--------A
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   7643  0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              106836  0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73921  0 +    116680 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Rhinolophus_sinicus.LVEH01000134.1                        368295  0 -   3329780 C
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Petromus_typicus.PetTyp_scaffold_221660                       53  0 -      2102 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odocoileus_virginianus.KZ100018.1                         145852 291 +    630418 I
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190536  0 +    196477 C
e Myotis_brandtii.KE162005.1                                280096 2104 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     72580  0 -     80779 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Megaderma_lyra.MegLyr_scaffold_4542                        14651  0 -    207569 C
e Manis_pentadactyla.KN006162.1                              51623 129 -    317179 I
e Manis_javanica.JSZB01003497.1                              19605 129 +    737560 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23274  0 -    143317 C
e Hipposideros_galeritus.HipGal_scaffold_101188                404  0 +      9903 C
e Hipposideros_armiger.JXIK01000431.1                       111834  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20663625  0 +  22651954 C
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Fukomys_damarensis.KN121974.1                             851835  0 +   3816255 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 34939  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    37814  0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64769  0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_15900             1299  0 -     75252 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  37358  0 +     51376 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           1799  0 +     23735 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1254328  0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1750  0 -      8501 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                       102024  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18363142  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18350879  0 -  23392119 C
e Capromys_pilorides.CapPil_scaffold_65020                    2398  0 -     12242 C
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C

a score=0.000000
s hg38.chrUn_KI270753v1                                      10161 2 +     62944 C---A
s Acinonyx_jubatus.LLWD01001279.1                           828765 2 -   1699592 t---g
i Acinonyx_jubatus.LLWD01001279.1                        I 53 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     72675 2 +     87051 C---A
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     75775 2 -     89534 T---A
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   18024 2 -     52922 C---A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         17961 2 -     28001 c---a
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8456 2 -     18505 c---a
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9309 2 -     12518 C---A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              9772 2 +     51355 c---a
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                2877 2 -     36483 c---a
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13332 2 +     28687 c---a
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 1802 2 +     27940 c---a
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            2881 2 -      9457 c---a
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             1839 2 +     30492 c---a
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              5832 2 +     47717 c---a
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              2569 2 +      5663 c---a
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             17021 2 +     50774 c---a
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          677480 2 -   2318259 a---a
i Ammotragus_lervia.NIVO01071767.1                       I 211 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      187030 1 +    412891 ----a
i Anoura_caudifer.AnoCau_scaffold_1412                   I 5 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             99955 2 -    100397 A---A
i Antilocapra_americana.AntAmePen_scaffold_12469         I 213 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      14091 2 +     20879 C---A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6436 1 +     43469 ----a
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 5 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21210033 2 -  21539123 c---a
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               44829 2 -     48001 c---a
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 27633 2 -     30947 C---A
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9405 2 -     89868 c---a
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              13789 2 -     40414 C---A
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                21678 2 +     72325 c---a
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193328 2 +  23207421 A---G
i Balaenoptera_acutorostrata.KI537508.1                  I 10 C 0
s Balaenoptera_bonaerensis.DF707048.1                         3793 2 -     18090 A---G
i Balaenoptera_bonaerensis.DF707048.1                    I 10 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    28565 2 +     34529 A---A
i Beatragus_hunteri.BeaHun_scaffold_50177                I 211 C 0
s Bison_bison.KN261452.1                                    202567 2 -    288883 t---a
i Bison_bison.KN261452.1                                 I 346 C 0
s Bos_indicus.CM003047.1                                  20275807 2 +  48749331 T---A
i Bos_indicus.CM003047.1                                 I 346 C 0
s Bos_mutus.JH880303.1                                     1128360 2 -   1948126 t---a
i Bos_mutus.JH880303.1                                   I 347 C 0
s Bos_taurus.CM000203.6                                   18086445 2 +  45695690 t---a
i Bos_taurus.CM000203.6                                  I 346 C 0
s Bubalus_bubalis.KI419123.1                               2822405 2 +   4408762 a---a
i Bubalus_bubalis.KI419123.1                             I 348 C 0
s Cacajao_ayresi.k141_552049                                102655 2 -    122966 C---A
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   62159 1 +     81800 ----A
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31340 2 -     95584 C---A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55441 2 -    119600 c---a
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Capra_aegagrus.CM003241.1                               18831586 2 +  46296322 a---a
i Capra_aegagrus.CM003241.1                              I 211 C 0
s Capra_hircus.CM004588.1                                 18062306 2 -  44709034 a---a
i Capra_hircus.CM004588.1                                I 211 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    2398 1 -     12242 ----G
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 3
s Carlito_syrichta.NW_007259797.1                           156707 2 -    496798 t---a
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6779 1 -     11696 ----a
i Carollia_perspicillata.CarPer_scaffold_92756           I 5 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138689 2 +    179628 C---A
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     95529 5 +    217609 AAGAA
i Catagonus_wagneri.CatWag_scaffold_2839                 I 7 C 0
s Cavia_aperea.AVPZ01000300.1                             18350879 1 -  23392119 ----a
i Cavia_aperea.AVPZ01000300.1                            C 0 I 3
s Cavia_porcellus.DS562891.1                              18363142 1 -  23407841 ----a
i Cavia_porcellus.DS562891.1                             C 0 I 3
s Cavia_tschudii.CavTsc_scaffold_8919                       102024 1 +    143979 ----A
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 I 3
s Cephalopachus_bancanus.k141_1423433                         6205 2 +     31688 T---A
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4478987 2 +   4669795 c---a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3481 2 +     17872 C---A
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4076 2 -     14043 C---A
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12171 2 +     27781 C---A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12321 2 -     20310 C---A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15301 2 +     29689 C---A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10057 2 -     20078 C---A
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          17972 2 -     27936 C---A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            6839 2 -     17152 C---A
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826571 2 +  39242232 C---A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226075 2 -  21565898 C---A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43194 2 -     53127 C---A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3444 2 +     13442 C---A
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       17990 2 -     27947 C---A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1019 2 +     10558 C---A
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4024 2 +     14005 C---A
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1259 2 -     17098 C---A
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1135 2 +     17877 C---A
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            158702 2 -    216457 C---A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63177 2 +     76511 C---A
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254328 1 +   2543920 ----A
i Chinchilla_lanigera.JH722012.1                         C 0 I 3
s Chiropotes_israelita.k141_747660                           99784 2 +    146308 C---A
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          31592 2 -     50570 C---A
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18431894 2 -  18827391 C---A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18391 2 -     50209 C---A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425395 2 + 135778131 c---a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1913896 2 +   2368649 c---a
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952144 2 + 200372422 C---A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40421 2 +     84244 C---A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549445 1 -  53390261 ----a
i Condylura_cristata.JH655891.1                          I 5 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 51929 2 +     63868 C---A
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_239572              3192 1 -      5012 ----A
i Crocidura_indochinensis.CroInd_scaffold_239572         I 5 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29944 2 -     87169 t---a
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 33 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37358 1 +     51376 ----A
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 3
s Dasyprocta_punctata.DasPun_flattened_line_15900             1299 1 -     75252 ----A
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 3
s Delphinapterus_leucas.KZ290073.1                        16812959 2 +  35494412 A---A
i Delphinapterus_leucas.KZ290073.1                       I 10 C 0
s Desmodus_rotundus.KZ672289.1                             8631777 1 +  20541912 ----A
i Desmodus_rotundus.KZ672289.1                           I 5 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37814 1 +     67921 ----A
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 3
s Dolichotis_patagonum.DolPat_scaffold_30833                 34939 1 -     42551 ----A
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 I 3
s Elaphurus_davidianus.JRFZ01104969.1                       313353 2 +    607251 A---A
i Elaphurus_davidianus.JRFZ01104969.1                    I 210 C 0
s Ellobius_lutescens.LOEQ01008920.1                          22436 2 -    110024 c---a
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                            2356 2 +      8657 c---a
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2148495 1 -  14770903 ----a
i Eptesicus_fuscus.JH977646.1                            I 8 C 0
s Erythrocebus_patas.Contig38                             21208567 2 -  21539334 C---A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12641 2 +    133382 A---G
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 10 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             26594 2 -     44125 A---G
i Eubalaena_japonica.EubJap_flattened_line_31514         I 10 C 0
s Felis_catus.CM001381.2                                  20238488 2 + 206538554 t---g
i Felis_catus.CM001381.2                                 I 135 I 20
s Felis_catus_fca126.CM031415.1                           20197351 2 + 205367284 t---g
i Felis_catus_fca126.CM031415.1                          I 155 I 32
s Felis_nigripes.FelNig_flattened_line_20823                 11029 2 -     36744 t---g
i Felis_nigripes.FelNig_flattened_line_20823             I 79 I 14
s Fukomys_damarensis.KN121974.1                             851835 1 +   3816255 ----A
i Fukomys_damarensis.KN121974.1                          C 0 I 3
s Galeopterus_variegatus.GalVar_scaffold_108840               3767 2 -      9135 C---A
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     610596 2 -    660261 a---a
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 211 C 0
s Glis_glis.GliGli_scaffold_19807                            32336 2 +     49224 C---A
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              19406 2 -     32273 C---A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341542 2 + 186649187 c---a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   34025 2 +     78134 C---A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 19802 2 +     36099 A---A
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 211 C 0
s Heterocephalus_glaber.JH602082.1                        20663625 1 +  22651954 ----a
i Heterocephalus_glaber.JH602082.1                       C 0 I 3
s Hoolock_leuconedys.ctg274                                    438200 2 +    630532 C---A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46494 2 +     55795 t---a
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 48 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23274 1 -    143317 ----A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 3
s Hystrix_cristata.HysCri_scaffold_5660                      84513 2 +    135385 T---A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 3
s Ictidomys_tridecemlineatus.JH393364.1                    7522427 2 -   7955117 c---a
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                 191 2 -     31341 A---A
i Inia_geoffrensis.IniGeo_flattened_line_34779           I 10 C 0
s Jaculus_jaculus.JH725527.1                               8278509 2 -   9596543 t---a
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                  165 2 -     18011 A---A
i Kogia_breviceps.KogBre_flattened_line_81059            I 10 C 0
s Lagothrix_lagothricha.k141_1005387                         15837 2 -     38430 C---A
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    18140 1 -     42476 ----A
i Lasiurus_borealis.LasBor_scaffold_32767                I 8 C 0
s Lepus_americanus.LepAme_scaffold_107385                     8332 2 -     14121 C---A
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             269229 2 -    662738 A---A
i Lipotes_vexillifer.KE559953.1                          I 10 C 0
s Lophocebus_aterrimus.ctg367                              1440529 2 +   1826925 C---A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                              10339 2 +     40492 C---A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679593 2 +  60120075 C---A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16110 2 -     26193 C---A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            83886 2 -    114318 c---a
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9577 2 -     23192 C---A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19041 2 -     29190 C---G
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27619 2 +     37952 C---A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842696 2 + 187317192 c---a
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461274 2 -  25927173 c---a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83475 2 +     89720 C---A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10468 2 +     20474 C---A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10265 2 -     14993 C---A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333127 2 -    668171 C---A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8577 2 -     24072 C---A
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29208 2 -     45290 C---A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92165 1 +     94391 ----g
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 5 C 0
s Mandrillus_leucophaeus.scaffold280                      23940796 2 -  24302211 C---A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354912 2 +    752769 c---a
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33104708 2 -  40650429 c---a
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 34683 2 +    140813 T---T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12184140 2 -  29670104 c---a
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    4847 2 +     10310 A---A
i Mesoplodon_bidens.MesBid_scaffold_108144               I 10 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                17528 1 -     19307 ----a
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 5 C 0
s Microtus_ochrogaster.CM001695.1                         11262417 2 -  27267610 c---a
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1851723 1 +   8254450 ----a
i Miniopterus_natalensis.LDJU01000034.1                  I 8 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             35407 1 +     64694 ----A
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 8 C 0
s Miopithecus_ogouensis.k141_534055                          12472 2 -     28506 C---A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    28342 2 -    437263 A---A
i Monodon_monoceros.MonMon_M_scaffold_103                I 10 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 143119 1 -    366855 ----A
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 5 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   2639 2 +     82753 A---A
i Moschus_moschiferus.MosMos_scaffold_13123              I 213 C 0
s Murina_feae.MurFea_scaffold_85699                           8459 1 +     14753 ----A
i Murina_feae.MurFea_scaffold_85699                      I 8 C 0
s Mus_caroli.LT608237.1                                   84363070 2 - 120012414 t---a
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87652571 2 - 129401213 c---a
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31357305 2 -  89631738 c---a
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90755060 2 - 130317789 c---a
i Mus_spretus.CM004101.1                                 C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     72580 1 -     80779 ----a
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 I 3
s Myotis_brandtii.KE162005.1                                282200 1 -  10118263 ----a
i Myotis_brandtii.KE162005.1                             I 2104 C 0
s Myotis_davidii.KB100139.1                                1589512 1 -   6019432 ----a
i Myotis_davidii.KB100139.1                              I 8 C 0
s Myotis_lucifugus.GL429869.1                              3905632 1 -   4330536 ----a
i Myotis_lucifugus.GL429869.1                            I 38 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                        1802 1 +      1835 ----a
i Myotis_myotis.MyoMyo_scaffold_281845                   I 54 C 0
s Nannospalax_galili.KL204047.1                            2036861 2 -   3037898 C---A
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               18522 2 +     21681 C---A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5867306 2 +   7148211 A---A
i Neophocaena_asiaeorientalis.KZ687982.1                 I 10 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    759306 1 +    783361 ----A
i Noctilio_leporinus.NocLep_scaffold_251                 I 5 C 0
s Ochotona_princeps.JH802162.1                             1365735 2 +   3988456 c---a
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         146143 2 +    630418 A---A
i Odocoileus_virginianus.KZ100018.1                      I 291 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          78497 2 -    150152 a---a
i Okapia_johnstoni.LVCL01S0005463.1                      I 200 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   27077 2 +     28053 C---A
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    82086 2 +    102263 C---A
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2783207 2 -  10937097 A---A
i Orcinus_orca.KB316932.1                                I 10 C 0
s Oryctolagus_cuniculus.CM000791.1                        67149232 2 + 174332312 c---a
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Ovis_aries.CM001607.2                                   17587764 2 +  44047080 a---a
i Ovis_aries.CM001607.2                                  I 211 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      175756 2 -    191736 A---A
i Ovis_canadensis.OviCan_scaffold_2572                   I 211 C 0
s Pan_paniscus.KQ411613.1                                    47507 2 +     80009 c---a
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146373 2 + 189151597 c---a
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_pardus.KV860321.1                                265825 2 +  18783137 t---g
i Panthera_pardus.KV860321.1                             I 55 C 0
s Panthera_tigris.KE722367.1                               4722705 2 -   8748460 t---g
i Panthera_tigris.KE722367.1                             I 55 C 0
s Pantholops_hodgsonii.KE114653.1                          1266665 2 -   2937107 a---a
i Pantholops_hodgsonii.KE114653.1                        I 209 C 0
s Papio_anubis.CM001495.2                                183446602 2 + 183742232 c---a
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10252 2 +     20448 C---A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567060 2 +  20919399 c---a
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   8992 2 +     41871 C---A
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12285 2 +     27711 C---A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3284 2 -     11374 C---A
i Papio_ursinus.k141_5274964                             C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18196720 2 -  18517816 c---a
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_221660                       53 1 -      2102 ----A
i Petromus_typicus.PetTyp_scaffold_221660                C 0 I 3
s Phocoena_phocoena.PhoPho_flattened_line_24159              10263 2 +     63832 A---A
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 10 C 0
s Piliocolobus_badius.k141_1142974                            1599 2 +     68526 C---G
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        41745 2 +     89929 C---G
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43159 2 +     51399 C---G
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299396 2 -  14605196 C---G
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3264 1 +     22620 ----a
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 8 C 0
s Pithecia_albicans.k141_1476471                              5046 2 +     26961 C---A
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1191 2 +     23417 C---A
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                5038 2 +     29694 C---A
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          30064 2 +     52772 C---A
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           5060 2 +     26198 C---A
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3941608 2 +   4542175 C---A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            5024 2 -     23490 C---A
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9282 2 -     39866 C---A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18448 2 +     34906 C---A
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       22710 2 +     87950 C---A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23539 2 +     88961 C---A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9210 2 +     39403 C---A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          22991 2 -     87928 C---A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         29950 2 +     60166 C---A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30147 2 +     67232 C---A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          25620 2 +     90634 C---A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          22992 2 -     89403 C---A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189134518 2 + 189387572 c---a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9574127 2 +   9816681 c---a
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76699 2 -     81375 C---A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8516 2 +     19060 C---A
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            12324 2 -     21651 t---t
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            16598 1 -     21811 ----a
i Pteronotus_parnellii.KE909381.1                        I 5 C 0
s Pteropus_alecto.KB030862.1                              22978244 1 +  28871421 ----a
i Pteropus_alecto.KB030862.1                             I 5 C 0
s Puma_concolor.QAVW01001104.1                            20275778 2 -  38429054 t---g
i Puma_concolor.QAVW01001104.1                           I 59 C 0
s Pygathrix_cinerea.k141_1153803                             18508 2 -     91421 C---A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612631 2 +   7812017 C---A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18538 2 -     72585 C---A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  7974 2 +     55207 A---A
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 211 C 0
s Rattus_norvegicus.chr16                                 53572578 2 +  90668790 C---A
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_217274                            10206 2 -     11128 C---A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239574 2 - 195417433 c---a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675221 2 +   7961872 C---A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89316 1 -     96226 ----a
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 5 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154584 1 -    313613 ----G
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 5 C 0
s Semnopithecus_entellus.k141_1672505                         3380 2 -     12572 C---A
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30232 2 +     39453 C---A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           10740 2 +     27826 C---A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10281 2 -     19483 C---A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3579 2 -     12762 C---A
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3424 2 +     13763 C---A
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     2220 2 -     30804 C---A
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Sorex_araneus.JH798187.1                                13652412 1 -  18376816 ----a
i Sorex_araneus.JH798187.1                               I 9 C 0
s Spermophilus_dauricus.KZ294078.1                         1955573 2 -   3870691 c---a
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Sus_scrofa.CM000828.4                                    6813110 2 +  69701581 a---a
i Sus_scrofa.CM000828.4                                  I 7 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                12644 1 +     41958 ----A
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 5 C 0
s Tarsius_lariang.k141_2201908                               27200 2 +     70052 T---G
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1997 2 -     16117 T---G
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186431908 2 + 186847797 c---a
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106836 1 +    114563 ----A
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 3
s Tonatia_saurophila.TonSau_scaffold_294                     82873 1 +    610378 ----a
i Tonatia_saurophila.TonSau_scaffold_294                 I 5 C 0
s Trachypithecus_auratus.k141_722599                         14318 2 -     20410 C---A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3441 2 -     12674 C---A
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14426 2 +     19930 C---A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      10828 2 -     19997 C---A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            50970 2 -     60166 C---A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18432 2 -     27529 C---A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                         63 2 +      9229 C---A
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          11966 2 -     21137 C---A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                      66 2 +      9131 C---A
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                           30 2 -      3730 C---A
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28298 2 +     32220 C---A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942395 2 +   6242583 C---A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11648 2 +     20839 C---A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    1902 2 +     27266 A---A
i Tragulus_javanicus.TraJav_scaffold_40725               I 232 C 0
s Tupaia_chinensis.KB320699.1                              2157564 2 +   4065304 c---a
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54696 1 -     77625 ----A
i Uropsilus_gracilis.UroGra_scaffold_12083               I 5 C 0
s Xerus_inauris.XerIna_scaffold_2302                          2563 2 +    224448 C---A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      16244 2 +     63895 C---A
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_761354               2 2 -      1267 A---A
i Ziphius_cavirostris.ZipCav_flattened_line_761354       N 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202 0 +      8798 C
e Galago_senegalensis.k141_631886                             7400 0 +     11339 C
e Galago_moholi.ctg2040                                     429710 0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964 2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445 0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734 0 -     33856 C
e Perodicticus_potto.k141_1186926                              597 0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219 0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 12248 182 -     43706 I
e Vicugna_pacos.KN270157.1                                 5373385 1 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Tursiops_truncatus.MRVK01000835.1                       15739447 1 +  33153633 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   7643 0 +      8208 C
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73921 0 +    116680 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Suricata_suricatta.SurSur_flattened_line_6629              19744 20 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Rhinolophus_sinicus.LVEH01000134.1                        368295 0 -   3329780 C
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14071 3 -     78924 I
e Panthera_onca.PanOnc_flattened_line_3271                  152561 29 +    230217 I
e Otocyon_megalotis.JAEUCK010005147.1                       463803 189 -    559221 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869 0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414 0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947 0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9152014 1112 -   9404916 T
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190536 0 +    196477 C
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398 7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Megaderma_lyra.MegLyr_scaffold_4542                        14651 0 -    207569 C
e Manis_pentadactyla.KN006162.1                              51623 129 -    317179 I
e Manis_javanica.JSZB01003497.1                              19605 129 +    737560 I
e Lycaon_pictus.CM007581.1                                17958082 1117 -  59628241 T
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hipposideros_galeritus.HipGal_scaffold_101188                404 0 +      9903 C
e Hipposideros_armiger.JXIK01000431.1                       111834 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Helogale_parvula.HelPar_flattened_line_2585               243749 16 +    327341 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689 0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64769 0 +   2246927 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11668671 0 + 224834208 C
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           1799 0 +     23735 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1750 0 -      8501 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Canis_lupus_orion.HG994398.1                            18503144 1117 +  63665305 T
e Canis_lupus_familiaris.chr16                            17961842 1117 -  59632846 T
e Canis_lupus_dingo.QKWQ01000480.1                         9037373 1119 -   9314153 T
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     2671 1117 -     43241 T
e CanFam4.chr16                                           17801930 1119 -  60362399 T
e Camelus_ferus.KB017975.1                                  404634 1 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2336336 1 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10003864 1 -  17673402 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538 0 +      5281 C
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T

a score=0.000000
s hg38.chrUn_KI270753v1                                      10163 2 +     62944 C---A
s Acinonyx_jubatus.LLWD01001279.1                           828767 2 -   1699592 t---a
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     72677 5 +     87051 TTATA
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 1
s Allactaga_bullata.AllBul_scaffold_9566                     75777 2 -     89534 T---A
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 1
s Allenopithecus_nigroviridis.k141_3361533                   18026 2 -     52922 C---A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         17963 2 -     28001 c---a
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8458 2 -     18505 c---a
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9311 2 -     12518 C---A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              9774 2 +     51355 c---a
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                2879 2 -     36483 c---a
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13334 2 +     28687 c---a
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 1804 2 +     27940 c---a
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            2883 2 -      9457 c---a
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             1841 2 +     30492 c---a
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              5834 2 +     47717 c---a
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              2571 2 +      5663 c---a
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             17023 2 +     50774 c---a
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          677482 2 -   2318259 t---a
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      187031 2 +    412891 t---a
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             99957 2 -    100397 T---G
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      14093 2 +     20879 C---A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6437 2 +     43469 t---a
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21210035 2 -  21539123 c---a
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               44831 2 -     48001 c---a
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 27635 2 -     30947 C---A
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9407 2 -     89868 c---a
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              13791 2 -     40414 C---A
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                21680 2 +     72325 c---a
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193330 2 +  23207421 T---A
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         3795 2 -     18090 T---A
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    28567 2 +     34529 T---A
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    202569 2 -    288883 t---A
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20275809 2 +  48749331 T---A
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1128362 2 -   1948126 t---A
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18086447 2 +  45695690 t---a
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2822407 2 +   4408762 t---a
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                102657 2 -    122966 C---A
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   62160 2 +     81800 C---A
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31342 2 -     95584 C---A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55443 2 -    119600 c---a
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10003865 1 -  17673402 ----A
i Camelus_bactrianus.KN276810.1                          I 1 C 0
s Camelus_dromedarius.KN272107.1                           2336337 1 -   7040546 ----A
i Camelus_dromedarius.KN272107.1                         I 1 C 0
s Camelus_ferus.KB017975.1                                  404635 1 -   1652518 ----A
i Camelus_ferus.KB017975.1                               I 1 C 0
s Capra_aegagrus.CM003241.1                               18831588 2 +  46296322 t---a
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18062308 2 -  44709034 T---A
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    2402 2 -     12242 A---A
i Capromys_pilorides.CapPil_scaffold_65020               I 3 C 0
s Carlito_syrichta.NW_007259797.1                           156709 2 -    496798 t---t
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6780 2 -     11696 t---g
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138691 2 +    179628 T---A
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     95534 2 +    217609 T---A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18350883 2 -  23392119 a---a
i Cavia_aperea.AVPZ01000300.1                            I 3 C 0
s Cavia_porcellus.DS562891.1                              18363146 2 -  23407841 a---a
i Cavia_porcellus.DS562891.1                             I 3 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                       102028 2 +    143979 A---A
i Cavia_tschudii.CavTsc_scaffold_8919                    I 3 C 0
s Cephalopachus_bancanus.k141_1423433                         6207 2 +     31688 T---T
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4478989 2 +   4669795 c---a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3483 2 +     17872 C---A
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4078 2 -     14043 C---A
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12173 2 +     27781 C---A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12323 2 -     20310 C---A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15303 2 +     29689 C---A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10059 2 -     20078 C---A
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          17974 2 -     27936 C---A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            6841 2 -     17152 C---A
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826573 2 +  39242232 C---A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226077 2 -  21565898 C---A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43196 2 -     53127 C---A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3446 2 +     13442 C---A
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       17992 2 -     27947 C---A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1021 2 +     10558 C---A
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4026 2 +     14005 C---A
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1261 2 -     17098 C---A
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1137 2 +     17877 C---A
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            158704 2 -    216457 C---A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63179 2 +     76511 C---A
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254332 2 +   2543920 a---a
i Chinchilla_lanigera.JH722012.1                         I 3 C 0
s Chiropotes_israelita.k141_747660                           99786 2 +    146308 C---A
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          31594 2 -     50570 C---A
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18431896 2 -  18827391 C---A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18393 2 -     50209 C---A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425397 2 + 135778131 c---a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1913898 2 +   2368649 c---a
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952146 2 + 200372422 C---A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40423 2 +     84244 C---A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549446 2 -  53390261 t---a
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1799 1 +     23735 ----A
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 51931 5 +     63868 TTTTA
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 1
s Crocidura_indochinensis.CroInd_scaffold_239572              3193 2 -      5012 A---A
i Crocidura_indochinensis.CroInd_scaffold_239572         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29946 2 -     87169 t---a
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37362 2 +     51376 A---A
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 3 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900             1303 2 -     75252 A---A
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 3 C 0
s Delphinapterus_leucas.KZ290073.1                        16812961 2 +  35494412 T---A
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8631778 2 +  20541912 T---C
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37818 2 +     67921 A---A
i Dinomys_branickii.DinBra_scaffold_21862                I 3 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 34943 2 -     42551 A---A
i Dolichotis_patagonum.DolPat_scaffold_30833             I 3 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       313355 2 +    607251 T---A
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          22438 5 -    110024 ttata
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 1
s Ellobius_talpinus.LOJH01081419.1                            2358 5 +      8657 ttata
i Ellobius_talpinus.LOJH01081419.1                       C 0 I 1
s Eptesicus_fuscus.JH977646.1                              2148496 2 -  14770903 g---a
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Erythrocebus_patas.Contig38                             21208569 2 -  21539334 C---A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12643 2 +    133382 T---A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Felis_catus.CM001381.2                                  20238510 2 + 206538554 t---a
i Felis_catus.CM001381.2                                 I 20 C 0
s Felis_catus_fca126.CM031415.1                           20197385 2 + 205367284 t---a
i Felis_catus_fca126.CM031415.1                          I 32 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 11045 2 -     36744 t---a
i Felis_nigripes.FelNig_flattened_line_20823             I 14 C 0
s Fukomys_damarensis.KN121974.1                             851839 2 +   3816255 g---a
i Fukomys_damarensis.KN121974.1                          I 3 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               3769 2 -      9135 T---A
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     610598 2 -    660261 t---a
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            32338 2 +     49224 T---A
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              19408 2 -     32273 C---A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341544 2 + 186649187 c---a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   34027 2 +     78134 T---A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 19804 2 +     36099 T---A
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20663629 2 +  22651954 g---a
i Heterocephalus_glaber.JH602082.1                       I 3 C 0
s Hipposideros_armiger.JXIK01000431.1                       111834 1 +   1711038 ----a
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 1
s Hipposideros_galeritus.HipGal_scaffold_101188                404 1 +      9903 ----A
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 I 1
s Hoolock_leuconedys.ctg274                                    438202 2 +    630532 C---A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46496 2 +     55795 t---g
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23278 2 -    143317 A---A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 3 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84518 2 +    135385 A---A
i Hystrix_cristata.HysCri_scaffold_5660                  I 3 I 1
s Ictidomys_tridecemlineatus.JH393364.1                    7522429 2 -   7955117 c---a
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                 193 2 -     31341 T---A
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8278511 2 -   9596543 t---a
i Jaculus_jaculus.JH725527.1                             C 0 I 1
s Kogia_breviceps.KogBre_flattened_line_81059                  167 2 -     18011 T---A
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         15839 2 -     38430 T---A
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    18141 2 -     42476 A---A
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     8334 2 -     14121 C---A
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 1
s Lipotes_vexillifer.KE559953.1                             269231 2 -    662738 T---A
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1440531 2 +   1826925 C---A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                              10341 2 +     40492 C---A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679595 2 +  60120075 C---A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16112 2 -     26193 C---A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            83888 2 -    114318 c---a
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9579 2 -     23192 C---A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19043 2 -     29190 C---A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27621 2 +     37952 C---A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842698 2 + 187317192 c---a
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461276 2 -  25927173 c---a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83477 2 +     89720 C---A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10470 2 +     20474 C---A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10267 2 -     14993 C---A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333129 2 -    668171 C---A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8579 2 -     24072 C---A
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29210 2 -     45290 C---A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92166 2 +     94391 t---g
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23940798 2 -  24302211 C---A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354914 2 +    752769 c---a
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33104710 2 -  40650429 c---a
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        14651 1 -    207569 ----A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 34685 5 +    140813 TTATA
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 1
s Mesocricetus_auratus.KB708134.1                         12184142 5 -  29670104 ttata
i Mesocricetus_auratus.KB708134.1                        C 0 I 1
s Mesoplodon_bidens.MesBid_scaffold_108144                    4849 2 +     10310 T---A
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                17529 2 -     19307 c---a
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11262419 5 -  27267610 ttata
i Microtus_ochrogaster.CM001695.1                        C 0 I 1
s Miniopterus_natalensis.LDJU01000034.1                    1851724 2 +   8254450 t---a
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             35408 2 +     64694 T---A
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                          12474 2 -     28506 C---A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    28344 2 -    437263 T---A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 143120 2 -    366855 T---A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   2641 2 +     82753 T---A
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           8460 2 +     14753 G---A
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84363072 5 - 120012414 tttta
i Mus_caroli.LT608237.1                                  C 0 I 1
s Mus_musculus.chr8                                       87652573 5 - 129401213 tttta
i Mus_musculus.chr8                                      C 0 I 1
s Mus_pahari.LT608297.1                                   31357307 5 -  89631738 tttta
i Mus_pahari.LT608297.1                                  C 0 I 1
s Mus_spretus.CM004101.1                                  90755062 5 - 130317789 tttta
i Mus_spretus.CM004101.1                                 C 0 I 1
s Myocastor_coypus.MyoCoy_scaffold_10123                     72584 2 -     80779 a---a
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 3 C 0
s Myotis_brandtii.KE162005.1                                282201 2 -  10118263 g---a
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1589513 2 -   6019432 g---a
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3905633 2 -   4330536 g---a
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                        1803 2 +      1835 g---a
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 C 0
s Nannospalax_galili.KL204047.1                            2036863 5 -   3037898 TTATA
i Nannospalax_galili.KL204047.1                          C 0 I 1
s Nasalis_larvatus.k141_413338                               18524 2 +     21681 C---A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5867308 2 +   7148211 T---A
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    759307 2 +    783361 T---A
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Ochotona_princeps.JH802162.1                             1365737 2 +   3988456 c---a
i Ochotona_princeps.JH802162.1                           C 0 I 1
s Odocoileus_virginianus.KZ100018.1                         146145 2 +    630418 T---A
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          78499 2 -    150152 t---a
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   27079 5 +     28053 TTATA
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 1
s Onychomys_torridus.OnyTor_scaffold_2986                    82088 5 +    102263 TTATA
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 1
s Orcinus_orca.KB316932.1                                  2783209 2 -  10937097 T---A
i Orcinus_orca.KB316932.1                                C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67149234 2 + 174332312 c---a
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 1
s Ovis_aries.CM001607.2                                   17587766 2 +  44047080 t---a
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      175758 2 -    191736 T---A
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    47509 2 +     80009 c---a
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146375 2 + 189151597 c---a
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_pardus.KV860321.1                                265827 2 +  18783137 t---g
i Panthera_pardus.KV860321.1                             C 0 I 54
s Panthera_tigris.KE722367.1                               4722707 2 -   8748460 t---a
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1266667 2 -   2937107 t---a
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183446604 2 + 183742232 c---a
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10254 2 +     20448 C---A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567062 2 +  20919399 c---a
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   8994 2 +     41871 C---A
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12287 2 +     27711 C---A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3286 2 -     11374 C---A
i Papio_ursinus.k141_5274964                             C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18196722 5 -  18517816 ttata
i Peromyscus_maniculatus.KI615324.1                      C 0 I 2
s Petromus_typicus.PetTyp_scaffold_221660                       57 2 -      2102 A---A
i Petromus_typicus.PetTyp_scaffold_221660                I 3 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              10265 2 +     63832 T---A
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            1601 2 +     68526 C---A
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        41747 2 +     89929 C---A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43161 2 +     51399 C---A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299398 2 -  14605196 C---A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3265 2 +     22620 g---a
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pithecia_albicans.k141_1476471                              5048 2 +     26961 C---A
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1193 2 +     23417 C---A
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                5040 2 +     29694 C---A
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          30066 2 +     52772 C---A
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           5062 2 +     26198 C---A
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3941610 2 +   4542175 C---A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            5026 2 -     23490 C---A
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9284 2 -     39866 C---A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18450 2 +     34906 C---A
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       22712 2 +     87950 T---A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23541 2 +     88961 C---A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9212 2 +     39403 C---A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          22993 2 -     87928 C---A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         29952 2 +     60166 C---A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30149 2 +     67232 C---A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          25622 2 +     90634 C---A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          22994 2 -     89403 C---A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189134520 2 + 189387572 g---a
i Pongo_abelii.CM009266.2                                C 0 I 36
s Pongo_pygmaeus.ctg66                                     9574129 2 +   9816681 g---a
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76701 2 -     81375 C---A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8518 2 +     19060 C---A
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            12326 5 -     21651 ttata
i Psammomys_obesus.NESX01036370.1                        C 0 I 1
s Pteronotus_parnellii.KE909381.1                            16599 2 -     21811 t---a
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteropus_alecto.KB030862.1                              22978245 2 +  28871421 t---a
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Puma_concolor.QAVW01001104.1                            20275780 2 -  38429054 t---a
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             18510 2 -     91421 C---A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612633 2 +   7812017 C---A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18540 2 -     72585 C---A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  7976 2 +     55207 T---A
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53572580 5 +  90668790 GCTTA
i Rattus_norvegicus.chr16                                C 0 I 1
s Rhinolophus_sinicus.LVEH01000134.1                        368295 1 -   3329780 ----a
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 1
s Rhinopithecus_bieti.k119_217274                            10208 2 -     11128 C---A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239576 2 - 195417433 c---a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675223 2 +   7961872 C---A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89317 2 -     96226 t---a
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154585 2 -    313613 T---A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                         3382 2 -     12572 C---A
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30234 2 +     39453 C---A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           10742 2 +     27826 C---A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10283 2 -     19483 C---A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3581 2 -     12762 C---A
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3426 2 +     13763 C---A
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     2222 5 -     30804 TTATA
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 I 1
s Sorex_araneus.JH798187.1                                13652413 2 -  18376816 t---a
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1955575 2 -   3870691 c---a
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Sus_scrofa.CM000828.4                                    6813112 2 +  69701581 t---a
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                12645 2 +     41958 T---A
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tarsius_lariang.k141_2201908                               27202 2 +     70052 T---A
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                1999 2 -     16117 T---A
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186431910 2 + 186847797 c---a
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106840 2 +    114563 A---A
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 3 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     82874 2 +    610378 t---a
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         14320 2 -     20410 C---A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3443 2 -     12674 C---A
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14428 2 +     19930 C---A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      10830 2 -     19997 C---A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            50972 2 -     60166 C---A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18434 2 -     27529 C---A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                         65 2 +      9229 C---A
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          11968 2 -     21137 C---A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                      68 2 +      9131 C---A
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                           32 2 -      3730 C---A
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28300 2 +     32220 C---A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942397 2 +   6242583 C---A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11650 2 +     20839 C---A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2157566 2 +   4065304 t---a
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15739448 1 +  33153633 ----a
i Tursiops_truncatus.MRVK01000835.1                      I 1 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54697 2 -     77625 C---A
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Vicugna_pacos.KN270157.1                                 5373386 1 -   5488506 ----A
i Vicugna_pacos.KN270157.1                               I 1 C 0
s Xerus_inauris.XerIna_scaffold_2302                          2565 2 +    224448 C---A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      16246 2 +     63895 T---A
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 1
s Ziphius_cavirostris.ZipCav_flattened_line_761354               4 2 -      1267 T---A
i Ziphius_cavirostris.ZipCav_flattened_line_761354       C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202 0 +      8798 C
e Galago_senegalensis.k141_631886                             7400 0 +     11339 C
e Galago_moholi.ctg2040                                     429710 0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964 2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445 0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734 0 -     33856 C
e Perodicticus_potto.k141_1186926                              597 0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219 0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 12248 182 -     43706 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_40725                    1904 0 +     27266 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   7643 0 +      8208 C
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73921 0 +    116680 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Suricata_suricatta.SurSur_flattened_line_6629              19744 20 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14071 3 -     78924 I
e Panthera_onca.PanOnc_flattened_line_3271                  152561 29 +    230217 I
e Otocyon_megalotis.JAEUCK010005147.1                       463803 189 -    559221 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869 0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414 0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947 0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9152014 1112 -   9404916 T
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190536 0 +    196477 C
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398 7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Manis_pentadactyla.KN006162.1                              51623 129 -    317179 I
e Manis_javanica.JSZB01003497.1                              19605 129 +    737560 I
e Lycaon_pictus.CM007581.1                                17958082 1117 -  59628241 T
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Helogale_parvula.HelPar_flattened_line_2585               243749 16 +    327341 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689 0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Eubalaena_japonica.EubJap_flattened_line_31514             26596 0 -     44125 C
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64769 0 +   2246927 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11668671 0 + 224834208 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1750 0 -      8501 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Canis_lupus_orion.HG994398.1                            18503144 1117 +  63665305 T
e Canis_lupus_familiaris.chr16                            17961842 1117 -  59632846 T
e Canis_lupus_dingo.QKWQ01000480.1                         9037373 1119 -   9314153 T
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     2671 1117 -     43241 T
e CanFam4.chr16                                           17801930 1119 -  60362399 T
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538 0 +      5281 C
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T

a score=0.000000
s hg38.chrUn_KI270753v1                                      10165 36 +     62944 G--A-TATTTCCTTTATCAATATAAATACATATATG-TAT
s Acinonyx_jubatus.LLWD01001279.1                           828769  4 -   1699592 t--a-t-------------------a--------------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     72683  6 +     87051 G--AAT-------------------A-------------T
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 1 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     75780  6 -     89534 T--ATT-------------------A-------------T
i Allactaga_bullata.AllBul_scaffold_9566                 I 1 C 0
s Allenopithecus_nigroviridis.k141_3361533                   18028 24 -     52922 T--A-TATTTCCTTTATCAACATAAA-------------T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         17965 24 -     28001 t--a-tatttcctttatcagcATAAA-------------T
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8460 24 -     18505 t--a-tatttcctttatcagcATAAA-------------T
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9313 24 -     12518 T--A-TATTTCCTTTATCAACATAAA-------------T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              9776 24 +     51355 t--a-tatttcctttgtctatGTAAA-------------T
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                2881 24 -     36483 t--a-tatttcctttgtctatGTAAA-------------T
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13336 24 +     28687 t--a-tatttcctttgtctatGTAAA-------------T
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 1806 24 +     27940 t--a-tatttcctttgtctatGTAAA-------------T
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            2885 24 -      9457 t--a-tatttcctttgtctatGTAAA-------------T
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             1843 24 +     30492 t--a-tatttcctttgtctatGTAAA-------------T
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              5836 24 +     47717 t--a-tatttcctttgtctatGTAAA-------------T
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              2573 24 +      5663 t--a-tatttcctttgtctatGTAAA-------------T
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             17025 24 +     50774 t--a-tatttcctttgtctatGTAAA-------------T
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          677484  5 -   2318259 T--G-T-------------------C-------------C
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      187033  5 +    412891 a--a-c-------------------t-------------c
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 3
s Antilocapra_americana.AntAmePen_scaffold_12469             99959  5 -    100397 T--G-T-------------------A-------------C
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      14095  5 +     20879 T--A-T-------------------A-------------A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6439  5 +     43469 a--a-C-------------------T-------------C
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21210037 24 -  21539123 t--a-tatttcctttatctatGTAAA-------------T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               44833 24 -     48001 t--a-tatttcctttatctatGTAAA-------------T
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 27637 24 -     30947 T--A-TATTTCCTTTATCTATGTAAA-------------T
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9409 24 -     89868 t--a-tatttcctttatctatGTAAA-------------T
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              13793 24 -     40414 T--A-TATTTCCTTTATCTATGTAAA-------------T
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                21682 24 +     72325 t--a-tatttcctttatctatGTAAA-------------T
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193332  5 +  23207421 T--A-T-------------------A-------------C
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         3797  5 -     18090 T--A-T-------------------A-------------C
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    28569  5 +     34529 T--G-T-------------------C-------------C
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    202571  5 -    288883 T--G-T-------------------C-------------C
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20275811  5 +  48749331 T--G-T-------------------C-------------C
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1128364  5 -   1948126 T--G-T-------------------C-------------C
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18086449  5 +  45695690 t--g-T-------------------C-------------C
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2822409  5 +   4408762 t--g-t-------------------c-------------C
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                102659 24 -    122966 C--A-TATTTCCTTTATCTATGTAAA-------------T
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   62162 24 +     81800 C--A-TATTTCCTTTACCTATGTAAA-------------T
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31344 24 -     95584 C--A-TATTTCCTTTATCTATGTAAA-------------T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55445 24 -    119600 c--a-tatttcctttatctatGTAAA-------------T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10003866  5 -  17673402 T--G-T-------------------A-------------C
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2336338  5 -   7040546 T--G-T-------------------A-------------C
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  404636  5 -   1652518 T--G-T-------------------A-------------C
i Camelus_ferus.KB017975.1                               C 0 C 0
s Capra_aegagrus.CM003241.1                               18831590  5 +  46296322 t--G-T-------------------C-------------C
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18062310  5 -  44709034 T--G-T-------------------C-------------C
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           156711  5 -    496798 t--a-c-------------------a-------------t
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6782  5 -     11696 a--a-c-------------------t-------------C
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138693  5 +    179628 C--A-G-------------------A-------------A
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     95536  5 +    217609 T--A-T-------------------A-------------C
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         6209  5 +     31688 T--A-C-------------------A-------------T
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4478991 22 +   4669795 t--a-tatttcctttatcaacttaa---------------
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3485 22 +     17872 T--A-TATTTCCTTTATCAACTTAA---------------
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4080 22 -     14043 T--A-TATTTCCTTTATCAACTTAA---------------
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12175 22 +     27781 T--A-TATTTCCTTTATCAACTTAA---------------
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12325 24 -     20310 T--A-TATTTCCTTTATCAACATAAA-------------T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15305 24 +     29689 T--A-TATTTCCTTTATCAACATAAA-------------T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10061 24 -     20078 T--A-TATTTCCTTTATCAACATAAA-------------T
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          17976 24 -     27936 T--A-TATTTCCTTTATCAACATAAA-------------T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            6843 24 -     17152 T--A-TATTTCCTTTATCAACATAAA-------------T
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826575 24 +  39242232 T--A-TATTTCCTTTATCAACATAAA-------------T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226079 24 -  21565898 T--A-TATTTCCTTTATCAACATAAA-------------T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43198 24 -     53127 T--A-TATTTCCTTTATCAACATAAA-------------T
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3448 24 +     13442 T--A-TATTTCCTTTATCAACATAAA-------------T
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       17994 24 -     27947 T--A-TATTTCTTTTATCAACATAAA-------------T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1023 24 +     10558 T--A-TATTTCCTTTATCAACATAAA-------------T
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4028 24 +     14005 T--A-CATTTCCTTTATCAACATAAA-------------T
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1263 24 -     17098 T--A-TATTTCCTTTATCTATGTAAA-------------T
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1139 24 +     17877 T--A-TATTTCCTTTATCTATGTAAA-------------T
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            158706 24 -    216457 T--A-TATTTCCTTTATCTATGTAAA-------------T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63181 24 +     76511 T--A-TATTTCCTTTATCTATGTAAA-------------T
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chiropotes_israelita.k141_747660                           99788 24 +    146308 C--A-TATTTCCTTTATCTATGTAAA-------------T
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          31596 24 -     50570 C--A-TATTTCCTTTATCTATGTAAA-------------T
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18431898 24 -  18827391 T--A-TATTTCCTTTATCAACATAAA-------------T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18395 24 -     50209 T--A-TATTTCCTTTATCAACATAAA-------------T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425399 24 + 135778131 t--a-tatttcctttatcaacataaa-------------t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1913900 24 +   2368649 t--a-tatttcctttatcgacataaa-------------t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952148 24 + 200372422 T--A-TATTTCCTTTATCGACATAAA-------------T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40425 24 +     84244 T--A-TATTTCCTTTATCGACATAAA-------------T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549448  5 -  53390261 t--a-t-------------------a-------------a
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1800  3 +     23735 -----C-------------------A-------------T
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 51937  6 +     63868 G--ACT-------------------A-------------T
i Cricetomys_gambianus.CriGam_scaffold_18520             I 1 C 0
s Crocidura_indochinensis.CroInd_scaffold_239572              3195  5 -      5012 T--A-T-------------------A-------------A
i Crocidura_indochinensis.CroInd_scaffold_239572         C 0 I 113
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29948  4 -     87169 t--a-t-------------------a--------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16812963  5 +  35494412 T--A-T-------------------A-------------C
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8631780  5 +  20541912 A--C-C-------------------T-------------C
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Eidolon_helvum.AWHC01278734.1                                  0  4 +      2334 ---a-t-------------------a-------------t
i Eidolon_helvum.AWHC01278734.1                          N 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       313357  5 +    607251 T--G-T-------------------C-------------C
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          22444  6 -    110024 g--aat-------------------a-------------t
i Ellobius_lutescens.LOEQ01008920.1                      I 1 C 0
s Ellobius_talpinus.LOJH01081419.1                            2364  6 +      8657 G--AAT-------------------A-------------T
i Ellobius_talpinus.LOJH01081419.1                       I 1 C 0
s Eptesicus_fuscus.JH977646.1                              2148498  5 -  14770903 t--a-c-------------------a-------------a
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Erythrocebus_patas.Contig38                             21208571 24 -  21539334 T--A-TATTTCCTTTATCAACATAAA-------------T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12645  5 +    133382 T--A-T-------------------A-------------C
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Felis_catus.CM001381.2                                  20238512  4 + 206538554 t--a-t-------------------a--------------
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20197387  4 + 205367284 t--a-t-------------------a--------------
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 11047  4 -     36744 t--a-t-------------------a--------------
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               3771  5 -      9135 T--A-T-------------------A-------------A
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     610600  5 -    660261 t--g-t-------------------a-------------T
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            32340  5 +     49224 T--A-T-------------------A-------------A
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              19410 36 -     32273 G--A-TATTTCCTTTATCAATATAAATACATATATG-TAT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341546 36 + 186649187 g--a-tatttcctttatcaatataaatacatatatg-tat
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   34029  5 +     78134 T--A-T-------------------A-------------A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 19806  5 +     36099 T--G-T-------------------C-------------C
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       111836  2 +   1711038 -------------------------a-------------a
i Hipposideros_armiger.JXIK01000431.1                    I 1 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188                406  2 +      9903 -------------------------A-------------A
i Hipposideros_galeritus.HipGal_scaffold_101188          I 1 C 0
s Hoolock_leuconedys.ctg274                                    438204 36 +    630532 G--A-TATTTCCTTTATAAATATAAATACATATATG-CAT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46498  4 +     55795 t--a-t-------------------a--------------
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84521  5 +    135385 T--A-C-------------------G-------------G
i Hystrix_cristata.HysCri_scaffold_5660                  I 1 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7522431  6 -   7955117 tata-t-------------------a--------------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 6
s Inia_geoffrensis.IniGeo_flattened_line_34779                 195  5 -     31341 T--A-T-------------------A-------------C
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8278514  6 -   9596543 t--aTT-------------------A-------------T
i Jaculus_jaculus.JH725527.1                             I 1 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                  169  5 -     18011 T--A-T-------------------A-------------C
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         15841 24 -     38430 T--A-TATTTCCTTTATCTATGTAAA-------------T
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    18143  5 -     42476 T--A-C-------------------A-------------A
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     8337  5 -     14121 T--A-T-------------------A-------------A
i Lepus_americanus.LepAme_scaffold_107385                I 1 I 1
s Lipotes_vexillifer.KE559953.1                             269233  5 -    662738 T--A-T-------------------A-------------C
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1440533 22 +   1826925 T--A-TATTTCCTTTATCAACATAA---------------
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                              10343 22 +     40492 T--A-TATTTCCTTTATCAACATAA---------------
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679597 22 +  60120075 T--A-TATTTCCTTTATCAACATAA---------------
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16114 22 -     26193 T--A-TATTTCCTTTATCAACATAA---------------
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            83890 22 -    114318 t--a-tatttccttTATCAACATAA---------------
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9581 22 -     23192 T--A-TATTTCCTTTATCAACATAA---------------
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19045 22 -     29190 T--A-TATTTCCTTTATCAACATAA---------------
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27623 22 +     37952 T--A-TATTTCCTTTATCAACATAA---------------
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842700 22 + 187317192 t--a-tatttcctttatcaacataa---------------
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461278 22 -  25927173 t--a-tatttcctttatcaacataa---------------
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83479 22 +     89720 T--A-TATTTCCTTTATCAACATAA---------------
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10472 22 +     20474 T--A-TATTTCCTTTATCAACATAA---------------
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10269 22 -     14993 T--A-TATTTCCTTTATCAACATAA---------------
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333131 22 -    668171 T--A-TATTTCCTTTATCAACATAA---------------
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8581 22 -     24072 T--A-TATTTCCTTTATCAACATAA---------------
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29212 22 -     45290 T--A-TATTTCCTTTATCAACATAA---------------
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92168  5 +     94391 t--a-t-------------------a-------------a
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23940800 22 -  24302211 T--A-TATTTCCTTTATCAACATAA---------------
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354916 22 +    752769 t--a-tatttccttTATCAACATAA---------------
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33104712  5 -  40650429 tatt-t----------------------------------
i Marmota_marmota.CZRN01000018.1                         C 0 I 3
s Megaderma_lyra.MegLyr_scaffold_4542                        14652  5 -    207569 G--C-C-------------------A-------------T
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 34691  6 +    140813 G--AAT-------------------A-------------T
i Meriones_unguiculatus.MerUng_scaffold_7390             I 1 C 0
s Mesocricetus_auratus.KB708134.1                         12184148  6 -  29670104 g--gat-------------------a-------------t
i Mesocricetus_auratus.KB708134.1                        I 1 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    4851  5 +     10310 T--A-T-------------------A-------------C
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                17531  5 -     19307 a--a-c-------------------t-------------c
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 5
s Microtus_ochrogaster.CM001695.1                         11262425  6 -  27267610 g--AAT-------------------A-------------T
i Microtus_ochrogaster.CM001695.1                        I 1 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1851726  5 +   8254450 c--a-c-------------------a-------------a
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             35410  5 +     64694 C--A-C-------------------A-------------A
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                          12476 24 -     28506 T--A-TATTTCCTTTATCAACATAAA-------------T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    28346  5 -    437263 T--A-T-------------------A-------------C
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 143122  5 -    366855 C--A-A-------------------A-------------C
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   2643  5 +     82753 T--G-T-------------------C-------------C
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           8462  5 +     14753 T--A-C-------------------A-------------A
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84363078  6 - 120012414 t--aat-------------------g-------------t
i Mus_caroli.LT608237.1                                  I 1 C 0
s Mus_musculus.chr8                                       87652579  6 - 129401213 t--aat-------------------g-------------t
i Mus_musculus.chr8                                      I 1 C 0
s Mus_pahari.LT608297.1                                   31357313  6 -  89631738 t--aat-------------------a-------------t
i Mus_pahari.LT608297.1                                  I 1 C 0
s Mus_spretus.CM004101.1                                  90755068  6 - 130317789 t--aat-------------------g-------------t
i Mus_spretus.CM004101.1                                 I 1 C 0
s Myotis_brandtii.KE162005.1                                282203  5 -  10118263 t--a-c-------------------a-------------a
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1589515  5 -   6019432 t--a-c-------------------a-------------a
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3905635  5 -   4330536 t--a-c-------------------a-------------a
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_281845                        1805  5 +      1835 t--a-c-------------------a-------------a
i Myotis_myotis.MyoMyo_scaffold_281845                   C 0 N 0
s Nannospalax_galili.KL204047.1                            2036869  6 -   3037898 G--AAT-------------------G-------------T
i Nannospalax_galili.KL204047.1                          I 1 C 0
s Nasalis_larvatus.k141_413338                               18526 24 +     21681 T--A-TATTTCCTTTATCGACATAAA-------------T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5867310  5 +   7148211 T--A-T-------------------A-------------C
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    759309  5 +    783361 T--A-C-------------------A-------------C
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Ochotona_princeps.JH802162.1                             1365740  5 +   3988456 t--t-T-------------------G-------------A
i Ochotona_princeps.JH802162.1                           I 1 I 1
s Odocoileus_virginianus.KZ100018.1                         146147  5 +    630418 T--G-T-------------------C-------------C
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          78501  5 -    150152 t--g-t-------------------a-------------C
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   27085  6 +     28053 G--AAT-------------------A-------------T
i Ondatra_zibethicus.OndZib_scaffold_46174               I 1 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    82094  6 +    102263 A--AAT-------------------A-------------T
i Onychomys_torridus.OnyTor_scaffold_2986                I 1 C 0
s Orcinus_orca.KB316932.1                                  2783211  5 -  10937097 T--A-T-------------------A-------------C
i Orcinus_orca.KB316932.1                                C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67149237  5 + 174332312 t--a-T-------------------A-------------A
i Oryctolagus_cuniculus.CM000791.1                       I 1 I 339
s Ovis_aries.CM001607.2                                   17587768  5 +  44047080 t--G-T-------------------C-------------C
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      175760  5 -    191736 T--G-T-------------------C-------------T
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    47511 36 +     80009 g--a-tatttcctttatcaatgtaaatacatatatg-tat
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146377 36 + 189151597 g--a-tatttcctttatcaatataaatacatatatg-tat
i Pan_troglodytes.CM009242.2                             C 0 I 80
s Panthera_pardus.KV860321.1                                265883  4 +  18783137 t--a-t-------------------a--------------
i Panthera_pardus.KV860321.1                             I 54 I 14
s Panthera_tigris.KE722367.1                               4722709  4 -   8748460 t--a-t-------------------a--------------
i Panthera_tigris.KE722367.1                             C 0 I 14
s Pantholops_hodgsonii.KE114653.1                          1266669  5 -   2937107 t--G-T-------------------C-------------C
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183446606 22 + 183742232 t--a-tatttcctttatcaacataa---------------
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10256 22 +     20448 T--A-TATTTCCTTTATCAACATAA---------------
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567064 22 +  20919399 t--a-tatttccttTATCAACATAA---------------
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   8996 22 +     41871 T--A-TATTTCCTTTATCAACATAA---------------
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12289 22 +     27711 T--A-TAGTTCCTTTATCAACATAA---------------
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3288 22 -     11374 T--A-TATTTCCTTTATCAACATAA---------------
i Papio_ursinus.k141_5274964                             C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18196729  6 -  18517816 a--aat-------------------a-------------T
i Peromyscus_maniculatus.KI615324.1                      I 2 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              10267  5 +     63832 T--A-T-------------------A-------------C
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            1603 24 +     68526 T--A-TATTTCCTTTATCGACATAAA-------------T
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        41749 24 +     89929 T--A-TATTTCCTTTATCGACATAAA-------------T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43163 24 +     51399 T--A-TATTTCCTTTATCGACATAAA-------------T
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299400 24 -  14605196 T--A-TATTTCCTTTATcgacataaa-------------t
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3267  5 +     22620 t--a-c-------------------a-------------a
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pithecia_albicans.k141_1476471                              5050 24 +     26961 C--A-TATTTCCTTTATCTATGTAAA-------------T
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1195 24 +     23417 C--A-TATTTCCTTTATCTATGTAAA-------------T
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                5042 24 +     29694 C--A-TATTTCCTTTATCTATGTAAA-------------T
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          30068 24 +     52772 C--A-TATTTCCTTTATCTATGTAAA-------------T
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           5064 24 +     26198 C--A-TATTTCCTTTATCTATGTAAA-------------T
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3941612 24 +   4542175 C--A-TATTTCCTTTATCTATGTAAA-------------T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            5028 24 -     23490 C--A-TATTTCCTTTATCTATGTAAA-------------T
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9286 24 -     39866 T--A-TATTTCCTTTATCTATGTAAA-------------T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18452 24 +     34906 T--A-TATTTCCTTTATCTATGTAAA-------------T
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       22714 24 +     87950 T--A-TATTTCCTTTATCTATGTAAA-------------T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23543 24 +     88961 T--A-TATTTCCTTTATCTATGTAAA-------------T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9214 24 +     39403 T--A-TATTTCCTTTATCTATGTAAA-------------T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          22995 24 -     87928 T--A-TATTTCCTTTATCTATGTAAA-------------T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         29954 24 +     60166 T--A-TATTTCCTTTATCTATGTAAA-------------T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30151 24 +     67232 T--A-TATTTCCTTTATCTATGTAAA-------------T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          25624 24 +     90634 T--A-TATTTCCTTTATCTATGTAAA-------------T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          22996 24 -     89403 T--A-TATTTCCTTTATCTATGTAAA-------------T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.NDHI03003595.1                                 5351 37 -     34550 g--a-tatttcctttatcaatataaatacatatatgatat
i Pongo_abelii.NDHI03003595.1                            I 78 I 108
s Pongo_pygmaeus.ctg66                                     9574131 36 +   9816681 g--a-tatttcctttatcaatataaatacatatatg-tat
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76703 24 -     81375 T--A-TATTTCCTTTATCGACATAAA-------------T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8520 24 +     19060 T--A-TATTTCCTTTATCGACATAAA-------------T
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            12332  6 -     21651 g--aAT-------------------A-------------T
i Psammomys_obesus.NESX01036370.1                        I 1 C 0
s Pteronotus_parnellii.KE909381.1                            16601  5 -     21811 t--a-c-------------------a-------------c
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteropus_alecto.KB030862.1                              22978247  5 +  28871421 t--a-t-------------------a-------------a
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Puma_concolor.QAVW01001104.1                            20275782  4 -  38429054 t--a-t-------------------a--------------
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             18512 24 -     91421 T--A-TGTTTCCTTTATCGACATAAA-------------T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612635 24 +   7812017 T--A-TATTTCCTTTATCGACATAAA-------------T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18542 24 -     72585 T--A-TATTTCCTTTATCGACATAAA-------------T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  7978  5 +     55207 T--G-T-------------------C-------------C
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53572586  6 +  90668790 G--ACT-------------------A-------------T
i Rattus_norvegicus.chr16                                I 1 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        368297  1 -   3329780 -------------------------a--------------
i Rhinolophus_sinicus.LVEH01000134.1                     I 1 C 0
s Rhinopithecus_bieti.k119_217274                            10210 24 -     11128 T--A-TATTTCCTTTATCGACATAAA-------------T
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239578 24 - 195417433 t--a-tatttcctttatcgacataaa-------------t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675225 24 +   7961872 T--A-TATTTCCTTTATCGACACAAA-------------T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89319  5 -     96226 t--a-t-------------------a-------------a
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154587  5 -    313613 T--A-T-------------------A-------------A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 3
s Semnopithecus_entellus.k141_1672505                         3384 24 -     12572 T--A-TATTTCCTTTATCGACATAAA-------------T
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30236 24 +     39453 T--A-TATTTCCTTTATCGACATAAA-------------T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           10744 24 +     27826 T--A-TATTTCCTTTATCGACATAAA-------------T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10285 24 -     19483 T--A-TATTTCCTTTATCGACATAAA-------------T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3583 24 -     12762 T--A-TATTTCCTTTATCGACATAAA-------------T
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3428 24 +     13763 T--A-TATTTCCTTTATCGACATAAA-------------T
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     2228  6 -     30804 G--AAT-------------------A-------------T
i Sigmodon_hispidus.SigHis_scaffold_42075                I 1 C 0
s Sorex_araneus.JH798187.1                                13652415  5 -  18376816 t--a-t-------------------a-------------a
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1955577  6 -   3870691 tata-t-------------------a--------------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 6
s Sus_scrofa.CM000828.4                                    6813114  5 +  69701581 t--a-t-------------------a-------------c
i Sus_scrofa.CM000828.4                                  C 0 I 24
s Tadarida_brasiliensis.TadBra_scaffold_25820                12647  5 +     41958 T--A-C-------------------A-------------C
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tarsius_lariang.k141_2201908                               27204  5 +     70052 T--A-C-------------------A-------------C
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                2001  5 -     16117 T--A-C-------------------A-------------C
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186431912 22 + 186847797 t--a-tatttcctttatcaacataa---------------
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     82876  5 +    610378 a--t-c-------------------t-------------C
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 3
s Trachypithecus_auratus.k141_722599                         14322 24 -     20410 T--A-TATTTCCTTTATCGACATAAA-------------T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3445 24 -     12674 T--A-TATTTCCTTTATCGACATAAA-------------T
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14430 24 +     19930 T--A-TATTTCCTTTATCGACATAAA-------------T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      10832 24 -     19997 T--A-TATTTCCTTTATCGACATAAA-------------T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            50974 24 -     60166 T--A-TATTTCCTTTATCGACATAAA-------------T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18436 24 -     27529 T--A-TATTTCCTTTATCGACATAAA-------------T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                         67 24 +      9229 T--A-TATTTCCTTTATCGACATAAA-------------T
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          11970 24 -     21137 T--A-TATTTCCTTTATCGACATAAA-------------T
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                      70 24 +      9131 T--A-TATTTCCTTTATCGACATAAA-------------T
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                           34 24 -      3730 T--A-TATTTCCTTTATCGACATAAA-------------T
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28302 24 +     32220 T--A-TATTTCCTTTATCGACATAAA-------------T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942399 24 +   6242583 T--A-CATTTCCTTTATCGACATAAA-------------T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11652 24 +     20839 T--A-TATTTCCTTTATCGACATAAA-------------T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2157568  5 +   4065304 t--a-t-------------------a-------------a
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15739449  5 +  33153633 t--a-t-------------------a-------------c
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54699  5 -     77625 T--A-T-------------------A-------------A
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Vicugna_pacos.KN270157.1                                 5373387  5 -   5488506 T--G-T-------------------A-------------C
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          2567  7 +    224448 TATA-T-------------------A-------------A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      16249  6 +     63895 T--ATT-------------------A-------------T
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 1 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_761354               6  5 -      1267 T--A-T-------------------A-------------C
i Ziphius_cavirostris.ZipCav_flattened_line_761354       C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 12248 182 -     43706 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_40725                    1904  0 +     27266 C
e Tolypeutes_matacus.TolMat_scaffold_228639                   7643  0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              106842  0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73921  0 +    116680 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Suricata_suricatta.SurSur_flattened_line_6629              19744 20 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Petromus_typicus.PetTyp_scaffold_221660                       59  0 -      2102 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14071  3 -     78924 I
e Panthera_onca.PanOnc_flattened_line_3271                  152561 29 +    230217 I
e Otocyon_megalotis.JAEUCK010005147.1                       463803 189 -    559221 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9152014 1112 -   9404916 T
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190536  0 +    196477 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     72586  0 -     80779 C
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Manis_pentadactyla.KN006162.1                              51623 129 -    317179 I
e Manis_javanica.JSZB01003497.1                              19605 129 +    737560 I
e Lycaon_pictus.CM007581.1                                17958082 1117 -  59628241 T
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23280  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20663631  0 +  22651954 C
e Helogale_parvula.HelPar_flattened_line_2585               243749 16 +    327341 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Fukomys_damarensis.KN121974.1                             851841  0 +   3816255 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Eubalaena_japonica.EubJap_flattened_line_31514             26596  0 -     44125 C
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 34945  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    37820  0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64769  0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_15900             1305  0 -     75252 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  37364  0 +     51376 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1254334  0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1750  0 -      8501 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                       102030  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18363148  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18350885  0 -  23392119 C
e Capromys_pilorides.CapPil_scaffold_65020                    2404  0 -     12242 C
e Canis_lupus_orion.HG994398.1                            18503144 1117 +  63665305 T
e Canis_lupus_familiaris.chr16                            17961842 1117 -  59632846 T
e Canis_lupus_dingo.QKWQ01000480.1                         9037373 1119 -   9314153 T
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     2671 1117 -     43241 T
e CanFam4.chr16                                           17801930 1119 -  60362399 T
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T

a score=0.000000
s hg38.chrUn_KI270753v1                                      10201 21 +     62944 ACA----T-----A-T----ATGT----ATATAT-TCACA
s Acinonyx_jubatus.LLWD01001279.1                           828773 12 -   1699592 ---------------t----atat----a----t-tcaca
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 2
s Acomys_cahirinus.AcoCah_scaffold_12655                     72689  8 +     87051 GCT----T-----A-T----AT------------------
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 23
s Allactaga_bullata.AllBul_scaffold_9566                     75786  8 -     89534 ATA----T-----A-T----AG------------------
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 21
s Allenopithecus_nigroviridis.k141_3361533                   18052 21 -     52922 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         17989 21 -     28001 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8484 21 -     18505 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9337 21 -     12518 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              9800 15 +     51355 ATA----T-----A-T----AT------A----T-TTGCA
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                2905 17 -     36483 ATA----T-----A-T----ATAT----A----T-TCGCA
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13360 15 +     28687 ATA----T-----A-T----AT------A----T-TCGCA
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 1830 17 +     27940 ATA----T-----A-T----ATAT----A----T-TCGCA
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            2909 17 -      9457 ATA----T-----A-T----ATAT----A----T-TCGCA
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             1867 17 +     30492 ATA----T-----A-T----ATAT----A----T-TCGCA
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              5860 17 +     47717 ACA----T-----A-T----ATAT----A----T-TCACA
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              2597 17 +      5663 ATA----T-----A-T----ATAT----A----T-TCGCA
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             17049 17 +     50774 ATA----T-----A-T----ATAT----A----T-TCGCA
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          677489 17 -   2318259 AAG----A-----A-T----ATAT----C----A-TCACA
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      187041 12 +    412891 ---------------C----AGAT----A----T-TCACA
i Anoura_caudifer.AnoCau_scaffold_1412                   I 3 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             99964 17 -    100397 AAG----A-----A-T----ATAT----A----G-CCACA
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      14100 10 +     20879 GAA----T-----G-TA--GAT------------------
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 24
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6444 17 +     43469 AAA----G-----A-C----AGAT----A----T-TTACA
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21210061 17 -  21539123 ACA----T-----A-T----ATGT----A----T-TCGCA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               44857 17 -     48001 ACA----T-----A-T----ATGT----A----T-TCGCA
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 27661 17 -     30947 ACA----T-----A-T----ATGT----A----T-TCGCA
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9433 17 -     89868 ACA----T-----A-T----ATGT----A----T-TCGCA
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              13817 17 -     40414 ACA----T-----A-T----ATGT----A----T-TCGCA
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                21706 17 +     72325 ACA----T-----A-T----ATGT----A----T-TCGCA
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193337 17 +  23207421 AAG----A-----G-T----ATAT----A----G-TCACA
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         3802 17 -     18090 AAG----A-----G-T----ATAT----A----G-TCACA
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    28574 17 +     34529 AAG----A-----A-T----ATAT----A----G-TCACA
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    202576 17 -    288883 AAG----A-----A-T----ATAT----A----G-TCACA
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20275816 17 +  48749331 AAG----A-----A-T----ATAT----A----G-TCACA
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1128369 17 -   1948126 AAG----A-----A-T----ATAT----A----G-TCACA
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18086454 17 +  45695690 AAG----A-----A-T----ATAT----A----G-TCACA
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2822414 17 +   4408762 AAG----A-----A-T----ATAT----A----G-TCACA
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                102683 17 -    122966 ACA----C-----A-T----ATGT----A----T-TCACA
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   62186 17 +     81800 ACA----C-----A-T----ATGT----A----T-TCACA
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31368 17 -     95584 ACA----C-----A-T----ATGT----A----T-TCACA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55469 17 -    119600 ACA----C-----A-T----ATGT----A----T-TCACA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10003871 17 -  17673402 AAG----A-----G-T----ATAT----A----T-TCACA
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2336343 17 -   7040546 AAG----A-----G-T----ATAT----A----T-TCACA
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  404641 17 -   1652518 AAG----A-----G-T----ATAT----A----T-TCACA
i Camelus_ferus.KB017975.1                               C 0 C 0
s Capra_aegagrus.CM003241.1                               18831595 17 +  46296322 CAG----A-----A-T----ATAT----C----A-TCACA
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18062315 17 -  44709034 CAG----A-----A-T----ATAT----C----A-TCACA
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    2404  7 -     12242 -TG----T-----G-T----At------------------
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 310
s Carlito_syrichta.NW_007259797.1                           156716 17 -    496798 cca----t-----g-t----atat----a----t-tcata
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6787 17 -     11696 AAA----C-----A-T----AGAC----A----T-TTACA
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138698  8 +    179628 GAA----T-----A-T----GC------------------
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 3
s Catagonus_wagneri.CatWag_scaffold_2839                     95541 11 +    217609 AAG----A-----G-T----ATAT----A-----------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 13
s Cavia_aperea.AVPZ01000300.1                             18350885  7 -  23392119 -ta----t-----g-t----at------------------
i Cavia_aperea.AVPZ01000300.1                            C 0 I 23
s Cavia_porcellus.DS562891.1                              18363148  7 -  23407841 -ta----t-----g-t----at------------------
i Cavia_porcellus.DS562891.1                             C 0 I 23
s Cavia_tschudii.CavTsc_scaffold_8919                       102030  7 +    143979 -TA----T-----G-T----AT------------------
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 I 23
s Cephalopachus_bancanus.k141_1423433                         6214 17 +     31688 ACA----T-----G-A----ATAT----A----T-TCATA
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4479013 19 +   4669795 --a----t-----a-t----atgc----atatat-tcaca
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3507 19 +     17872 --A----T-----A-T----ATGC----ATATAT-TCACA
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4102 19 -     14043 --A----T-----A-T----ATGC----ATATAT-TCACA
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12197 19 +     27781 --A----T-----A-T----ATGC----ATATAT-TCACA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12349 21 -     20310 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15329 21 +     29689 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10085 21 -     20078 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          18000 21 -     27936 ACA----T-----A-T----ATGC----ATATAT-TCGCA
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            6867 21 -     17152 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826599 21 +  39242232 GCA----T-----A-T----ATGC----ATATAT-TCACA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226103 21 -  21565898 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43222 21 -     53127 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3472 21 +     13442 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       18018 21 -     27947 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1047 21 +     10558 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4052 21 +     14005 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1287 17 -     17098 ACA----T-----A-T----ATGT----A----T-TCACA
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1163 17 +     17877 ACA----T-----A-T----ATGT----A----T-TCACA
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            158730 17 -    216457 ACA----T-----A-T----ATGT----A----T-TCACA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63205 17 +     76511 ACA----T-----A-T----ATGT----A----T-TCACA
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254334  7 +   2543920 -tg----t-----g-t----at------------------
i Chinchilla_lanigera.JH722012.1                         C 0 I 21
s Chiropotes_israelita.k141_747660                           99812 17 +    146308 ACA----C-----A-T----ATGT----A----T-TCACA
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          31620 17 -     50570 ACA----C-----A-T----ATGT----A----T-TCACA
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18431922 21 -  18827391 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18419 21 -     50209 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425423 21 + 135778131 aca----t-----a-t----atgc----atatat-tcaca
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1913924 21 +   2368649 aca----t-----a-t----atgc----atatat-tcaca
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952172 21 + 200372422 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40449 21 +     84244 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549453 19 -  53390261 taacCTGA-----C-C----ATAT----G----G-TC--A
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1803 21 +     23735 AAG----A-----A-TATACATAT----A----T-TCACA
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 I 10
s Cricetomys_gambianus.CriGam_scaffold_18520                 51943  8 +     63868 GCA----A-----T-T----AT------------------
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 23
s Crocidura_indochinensis.CroInd_scaffold_37019               4196 17 -     19598 AAT----A-----T-T----ATAT----A----T-TCACA
i Crocidura_indochinensis.CroInd_scaffold_37019          I 19 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29952 12 -     87169 ---------------t----atat----a----t-tcaca
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 2
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37364  7 +     51376 -TG----T-----G-T----AT------------------
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 289
s Dasyprocta_punctata.DasPun_flattened_line_15900             1305  7 -     75252 -TA----T-----G-T----AT------------------
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 25
s Delphinapterus_leucas.KZ290073.1                        16812968 17 +  35494412 AAG----A-----G-T----ATAT----A----G-TCACA
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8631785 17 +  20541912 AAA----C-----A-C----AGAT----A----T-TTACA
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37820  7 +     67921 -TG----T-----A-T----AT------------------
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 21
s Dolichotis_patagonum.DolPat_scaffold_30833                 34945  7 -     42551 -TA----T-----G-T----AT------------------
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 I 25
s Eidolon_helvum.AWHC01278734.1                                  4 21 +      2334 ata----c-----a-tatacatat----a----t-tcacg
i Eidolon_helvum.AWHC01278734.1                          C 0 I 10
s Elaphurus_davidianus.JRFZ01104969.1                       313362 17 +    607251 AAG----A-----A-T----ATAT----A----G-TCACA
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          22450  8 -    110024 gca----t-----g-t----aa------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 23
s Ellobius_talpinus.LOJH01081419.1                            2370  8 +      8657 GCA----T-----G-T----AT------------------
i Ellobius_talpinus.LOJH01081419.1                       C 0 I 23
s Eptesicus_fuscus.JH977646.1                              2148503 17 -  14770903 ata----t-----g-t----atat----a----t-tcaca
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Erythrocebus_patas.Contig38                             21208595 21 -  21539334 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12650 17 +    133382 AAG----A-----G-T----ATAT----A----G-TCACA
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             26596 12 -     44125 ---------------T----ATAT----A----G-TCACA
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20238516 12 + 206538554 ---------------t----atat----a----t-atata
i Felis_catus.CM001381.2                                 C 0 I 2
s Felis_catus_fca126.CM031415.1                           20197391 12 + 205367284 ---------------t----atat----a----t-tcaca
i Felis_catus_fca126.CM031415.1                          C 0 I 2
s Felis_nigripes.FelNig_flattened_line_20823                 11051 12 -     36744 ---------------t----atat----a----t-tcaca
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 2
s Fukomys_damarensis.KN121974.1                             851841  7 +   3816255 -tg----t-----a-t----at------------------
i Fukomys_damarensis.KN121974.1                          C 0 I 29
s Galeopterus_variegatus.GalVar_scaffold_108840               3776 17 -      9135 ATA----T-----G-T----ATAT----A----T-TCACA
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     610605 17 -    660261 AAG----A-----A-T----ATAT----A----G-CCACA
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            32345  8 +     49224 GAA----T-----G-T----AT------------------
i Glis_glis.GliGli_scaffold_19807                        C 0 I 25
s Gorilla_beringei.k141_3596273                              19446 21 -     32273 ACA----T-----A-T----ATGT----ATATAT-TCACA
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341582 21 + 186649187 aca----t-----a-t----atgt----atatat-tcaca
i Gorilla_gorilla.LT578341.1                             C 0 I 45
s Graphiurus_murinus.GraMur_scaffold_10447                   34034  8 +     78134 GAA----T-----G-T----GT------------------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 25
s Helogale_parvula.HelPar_flattened_line_2585               243765  9 +    327341 ----------------------AT----A----T-TCACA
i Helogale_parvula.HelPar_flattened_line_2585            I 16 I 1
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 19811 17 +     36099 AAG----A-----A-T----ATAT----C----A-TCACA
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20663631  7 +  22651954 -ta----t-----a-t----at------------------
i Heterocephalus_glaber.JH602082.1                       C 0 I 28
s Hipposideros_armiger.JXIK01000431.1                       111838 26 +   1711038 tat----aatgtaa-tatacatat----a----t-tcaca
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 10
s Hipposideros_galeritus.HipGal_scaffold_101188                408 21 +      9903 TAT----A-----A-TATACATAT----A----T-TCACA
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 I 10
s Hoolock_leuconedys.ctg274                                    438240 21 +    630532 ACA----T-----A-T----ATGT----ATATAT-TCACA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46502 12 +     55795 ---------------t----atat----a----g-tcaca
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 2
s Ictidomys_tridecemlineatus.JH393364.1                    7522443  3 -   7955117 -------------------------------------aAT
i Ictidomys_tridecemlineatus.JH393364.1                  I 6 I 21
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23280  7 -    143317 -TA----T-----G-T----AT------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 25
s Hystrix_cristata.HysCri_scaffold_5660                      84526  8 +    135385 GTA----T-----A-T----TT------------------
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 25
s Inia_geoffrensis.IniGeo_flattened_line_34779                 200 21 -     31341 AAG----A-----G-T----ATATAGATA----G-TCACA
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8278520  8 -   9596543 GTA----T-----A-G----AT------------------
i Jaculus_jaculus.JH725527.1                             C 0 I 20
s Kogia_breviceps.KogBre_flattened_line_81059                  174 17 -     18011 AAG----A-----G-T----ATAT----A----G-TTACA
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         15865 17 -     38430 ACA----T-----A-T----ATGT----A----T-TCACA
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    18148 17 -     42476 ATA----T-----G-T----ATGA----A----T-CCACA
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     8343 17 -     14121 ATG----T-----G-T----ATAT----A----T-TCACA
i Lepus_americanus.LepAme_scaffold_107385                I 1 C 0
s Lipotes_vexillifer.KE559953.1                             269238 17 -    662738 AAG----A-----G-T----ATAT----A----G-TCACA
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1440555 19 +   1826925 --A----T-----A-T----ATGC----ATATAT-TCACA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                              10365 19 +     40492 --A----T-----A-T----ATGC----ATATAT-TCACA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679619 19 +  60120075 --A----T-----A-T----ATGC----ATATAT-TCACA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16136 19 -     26193 --A----T-----A-T----ATGC----ATATAT-TCACA
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            83912 19 -    114318 --A----T-----A-T----ATGC----ATATAT-TCACA
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9603 19 -     23192 --A----T-----A-T----ATGC----ATATAT-TCACA
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19067 19 -     29190 --A----T-----A-T----ATGC----ATATAT-TCACA
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27645 19 +     37952 --A----T-----A-T----ATGC----ATATAT-TCACA
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842722 19 + 187317192 --a----t-----a-t----atgc----atatat-tcaca
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461300 19 -  25927173 --a----t-----a-t----atgc----atatat-tcaca
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83501 19 +     89720 --A----T-----A-T----ATGC----ATATAT-TCACA
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10494 19 +     20474 --A----T-----A-T----ATGC----ATATAT-TCACA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10291 19 -     14993 --A----T-----A-T----ATGC----ATATAT-TCACA
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333153 19 -    668171 --A----T-----A-T----ATGC----ATATAT-TCACA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8603 19 -     24072 --A----T-----A-T----ATGC----ATATAT-TCACA
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29234 19 -     45290 --A----T-----A-T----ATGC----ATATAT-TCACA
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92173 21 +     94391 aag----a-----a-tatacatgt----a----t-tcaca
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 10
s Mandrillus_leucophaeus.scaffold280                      23940822 19 -  24302211 --A----T-----A-T----ATGC----ATATAT-TCACA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354938 19 +    752769 --A----T-----A-T----ATGC----ATATAT-TCACA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33104720  3 -  40650429 -------------------------------------aaT
i Marmota_marmota.CZRN01000018.1                         I 3 I 21
s Megaderma_lyra.MegLyr_scaffold_4542                        14657 21 -    207569 TAG----A-----A-TATACATAT----A----T-TCACA
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 10
s Meriones_unguiculatus.MerUng_scaffold_7390                 34697  8 +    140813 GCT----C-----A-T----AT------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 23
s Mesocricetus_auratus.KB708134.1                         12184154  8 -  29670104 gca----t-----a-t----at------------------
i Mesocricetus_auratus.KB708134.1                        C 0 I 23
s Mesoplodon_bidens.MesBid_scaffold_108144                    4856 17 +     10310 AAG----A-----G-T----ATAT----A----G-TCACA
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                17541 10 -     19307 ---------------C----AGAT----A----T-TTA--
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 5 C 0
s Microtus_ochrogaster.CM001695.1                         11262431  8 -  27267610 GCA----T-----G-T----AT------------------
i Microtus_ochrogaster.CM001695.1                        C 0 I 23
s Miniopterus_natalensis.LDJU01000034.1                    1851731 17 +   8254450 ata----t-----a-t----atat----a----t-taaca
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             35415 17 +     64694 ATA----T-----A-T----ATAT----A----T-TAACA
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                          12500 21 -     28506 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    28351 17 -    437263 AAG----A-----G-T----ATAT----A----G-TCACA
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 143127 16 -    366855 AAA----T-----A-T----AGAT----A----T-C-GCA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   2648 17 +     82753 AAG----A-----A-T----ATAC----A----G-TCACA
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           8467 17 +     14753 ATA----T-----G-T----ATAT----A----T-TCACA
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84363084  8 - 120012414 gtt----t-----a-t----at------------------
i Mus_caroli.LT608237.1                                  C 0 I 23
s Mus_musculus.chr8                                       87652585  8 - 129401213 gtt----t-----a-t----at------------------
i Mus_musculus.chr8                                      C 0 I 23
s Mus_pahari.LT608297.1                                   31357319  8 -  89631738 gtt----t-----a-t----at------------------
i Mus_pahari.LT608297.1                                  C 0 I 23
s Mus_spretus.CM004101.1                                  90755074  8 - 130317789 gtt----t-----a-t----at------------------
i Mus_spretus.CM004101.1                                 C 0 I 23
s Myocastor_coypus.MyoCoy_scaffold_10123                     72586  7 -     80779 -tg----t-----g-t----at------------------
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 I 318
s Myotis_brandtii.KE162005.1                                282208 17 -  10118263 ata----t-----g-t----atat----a----t-tcaca
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1589520 17 -   6019432 ata----t-----a-t----atat----a----t-tcaca
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3905640 17 -   4330536 ata----t-----g-t----atat----a----t-tcaca
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_1392844                         39 17 +       242 ATA----T-----A-T----ATAT----A----T-TCACA
i Myotis_myotis.MyoMyo_scaffold_1392844                  N 0 C 0
s Nannospalax_galili.KL204047.1                            2036875  8 -   3037898 GAA----T-----A-T----AG------------------
i Nannospalax_galili.KL204047.1                          C 0 I 23
s Nasalis_larvatus.k141_413338                               18550 21 +     21681 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5867315 17 +   7148211 AAG----A-----G-T----ATAT----A----G-TCACA
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    759314 17 +    783361 AAA----T-----A-T----AGAT----A----T-TCACA
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Ochotona_princeps.JH802162.1                             1365746 17 +   3988456 ATG----T-----G-T----AAAA----C----T-TCACA
i Ochotona_princeps.JH802162.1                           I 1 C 0
s Odocoileus_virginianus.KZ100018.1                         146152 17 +    630418 AAG----A-----A-T----ATAT----A----G-CCACA
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          78506 17 -    150152 AAG----A-----A-T----ATAT----A----G-CCACA
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   27091  8 +     28053 GCA----T-----G-T----AT------------------
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 23
s Onychomys_torridus.OnyTor_scaffold_2986                    82100  8 +    102263 GCA----T-----A-A----AT------------------
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 23
s Orcinus_orca.KB316932.1                                  2783216 17 -  10937097 AAG----A-----G-T----ATAT----A----G-TCACA
i Orcinus_orca.KB316932.1                                C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67149581 17 + 174332312 atg----t-----g-t----atat----a----t-tcacA
i Oryctolagus_cuniculus.CM000791.1                       I 339 C 0
s Ovis_aries.CM001607.2                                   17587773 17 +  44047080 AAG----A-----A-T----ATAT----C----A-TCACA
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      175765 17 -    191736 AAG----A-----A-T----ATAT----C----A-TCACA
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    47547 21 +     80009 aca----t-----a-t----atgt----atatat-tcaca
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03001836.1                             33461 21 +     51860 aca----t-----a-t----atgt----atatat-tcaca
i Pan_troglodytes.NBAG03001836.1                         I 48 I 624
s Panthera_onca.PanOnc_flattened_line_3271                  152590 12 +    230217 ---------------T----ATAT----A----T-TCACA
i Panthera_onca.PanOnc_flattened_line_3271               I 29 I 2
s Panthera_pardus.KV860321.1                                265901 12 +  18783137 ---------------t----atat----a----t-tcaca
i Panthera_pardus.KV860321.1                             I 14 I 2
s Panthera_tigris.KE722367.1                               4722727 12 -   8748460 ---------------t----atat----a----t-tcaca
i Panthera_tigris.KE722367.1                             I 14 I 2
s Pantholops_hodgsonii.KE114653.1                          1266674 17 -   2937107 AAG----A-----A-T----ATAT----C----A-TCACA
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183446628 19 + 183742232 --a----t-----a-t----atgc----atatat-tcaca
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10278 19 +     20448 --A----T-----A-T----ATGC----ATATAT-TCACA
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567086 19 +  20919399 --A----T-----A-T----ATGC----ATATAT-TCACA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   9018 19 +     41871 --A----T-----A-T----ATGC----ATATAT-TCACA
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12311 19 +     27711 --A----T-----A-T----ATGC----ATATAT-TCACA
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3310 19 -     11374 --A----T-----A-T----ATGC----ATATAT-TCACA
i Papio_ursinus.k141_5274964                             C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18196735  8 -  18517816 GCA----T-----A-T----GT------------------
i Peromyscus_maniculatus.KI615324.1                      C 0 I 23
s Petromus_typicus.PetTyp_scaffold_221660                       59  7 -      2102 -TG----T-----G-T----AT------------------
i Petromus_typicus.PetTyp_scaffold_221660                C 0 I 29
s Phocoena_phocoena.PhoPho_flattened_line_24159              10272 17 +     63832 AAG----A-----G-T----ATAT----A----G-TCACA
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            1627 21 +     68526 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        41773 21 +     89929 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43187 21 +     51399 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299424 21 -  14605196 aca----t-----a-t----atgc----atatat-tcaca
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3272 17 +     22620 ata----t-----g-t----atat----a----t-tcaca
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pithecia_albicans.k141_1476471                              5074 18 +     26961 ACA----T-----AAT----ATGT----A----T-TCACA
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1219 18 +     23417 ACA----T-----AAT----ATGT----A----T-TCACA
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                5066 18 +     29694 ACA----T-----AAT----ATGT----A----T-TCACA
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          30092 18 +     52772 ACA----T-----AAT----ATGT----A----T-TCACA
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           5088 18 +     26198 ACA----T-----AAT----ATGT----A----T-TCACA
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3941636 18 +   4542175 ACA----T-----AAT----ATGT----A----T-TCACA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            5052 18 -     23490 ACA----T-----AAT----ATGT----A----T-TCACA
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9310 17 -     39866 ACA----T-----A-T----ATGT----A----T-TCACA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18476 17 +     34906 ACA----T-----A-T----ATGT----A----T-TCACA
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       22738 17 +     87950 ACA----T-----A-T----ATGT----A----T-TCACA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23567 17 +     88961 ACA----T-----A-T----ATGT----A----T-TCACA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9238 17 +     39403 ACA----T-----A-T----ATGT----A----T-TCACA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          23019 17 -     87928 ACA----T-----A-T----ATGT----A----T-TCACA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         29978 17 +     60166 ACA----T-----A-T----ATGT----A----T-TCACA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30175 17 +     67232 ACA----T-----A-T----ATGT----A----T-TCACA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          25648 17 +     90634 ACA----T-----A-T----ATGT----A----T-TCACA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          23020 17 -     89403 ACA----T-----A-T----ATGT----A----T-TCACA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189134558 21 + 189387572 aca----t-----a-t----atgt----atatat-tcaca
i Pongo_abelii.CM009266.2                                I 36 C 0
s Pongo_pygmaeus.ctg66                                     9574167 21 +   9816681 aca----t-----a-t----atgt----atatat-tcaca
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76727 21 -     81375 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8544 21 +     19060 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            12338  8 -     21651 GCT----C-----A-T----AT------------------
i Psammomys_obesus.NESX01036370.1                        C 0 I 23
s Pteronotus_parnellii.KE909381.1                            16606 17 -     21811 aga----t-----a-a----aaat----a----t-ttaca
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteropus_alecto.KB030862.1                              22978252 21 +  28871421 aag----a-----a-tatacagat----g----t-tcaCA
i Pteropus_alecto.KB030862.1                             C 0 I 10
s Puma_concolor.QAVW01001104.1                            20275786 12 -  38429054 ---------------t----atat----a----t-tcaca
i Puma_concolor.QAVW01001104.1                           C 0 I 2
s Pygathrix_cinerea.k141_1153803                             18536 21 -     91421 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612659 21 +   7812017 ACA----T-----A-T----ATGC----ATGTAT-TCACA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18566 21 -     72585 ACA----T-----A-T----ATGC----ATGTAT-TCACA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  7983 17 +     55207 AAG----A-----A-T----ATAT----A----G-TCACA
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53572592  6 +  90668790 GTT----T-----A-T------------------------
i Rattus_norvegicus.chr16                                C 0 I 18
s Rhinolophus_sinicus.LVEH01000134.1                        368298 20 -   3329780 -ag----a-----a-tatacatat----a----t-tcaca
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 10
s Rhinopithecus_bieti.k119_217274                            10234 21 -     11128 ACA----T-----A-T----ATGC----ATACAT-TCACA
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239602 21 - 195417433 aca----t-----a-t----atgc----atatat-tcaca
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675249 21 +   7961872 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89324 21 -     96226 aag----a-----a-tatacatat----a----t-tcaca
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 10
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154595 11 -    313613 -------------T-C----ATAT----A----T-TC--A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 3 C 0
s Semnopithecus_entellus.k141_1672505                         3408 21 -     12572 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30260 21 +     39453 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           10768 21 +     27826 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10309 21 -     19483 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3607 21 -     12762 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3452 21 +     13763 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     2234  8 -     30804 GCA----T-----A-T----AT------------------
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 I 23
s Sorex_araneus.JH798187.1                                13652420 17 -  18376816 aat----a-----t-t----atat----a----t-tcaca
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1955589  3 -   3870691 -------------------------------------aAT
i Spermophilus_dauricus.KZ294078.1                       I 6 I 21
s Suricata_suricatta.SurSur_flattened_line_6629              19764  4 -    196729 -----------------------------------TCAC-
i Suricata_suricatta.SurSur_flattened_line_6629          I 20 C 0
s Sus_scrofa.JH118708.1                                      38419 17 -     47482 aag----c-----a-t----atat----a-----ttcaca
i Sus_scrofa.JH118708.1                                  I 898 I 137
s Tadarida_brasiliensis.TadBra_scaffold_25820                12652 17 +     41958 AAA----T-----A-T----ATAT----A----T-TCACA
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tarsius_lariang.k141_2201908                               27209 17 +     70052 ACA----T-----G-T----ATAT----A----T-TCATA
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                2006 17 -     16117 ACA----T-----G-T----ATAT----A----T-TCATA
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186431934 19 + 186847797 --a----t-----a-t----atgc----atatat-tcaca
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106842  7 +    114563 -TC----T-----G-T----AT------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 29
s Tonatia_saurophila.TonSau_scaffold_294                     82884 12 +    610378 ---------------C----AGAT----A----T-TTACG
i Tonatia_saurophila.TonSau_scaffold_294                 I 3 C 0
s Trachypithecus_auratus.k141_722599                         14346 21 -     20410 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3469 21 -     12674 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14454 21 +     19930 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      10856 21 -     19997 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            50998 21 -     60166 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18460 21 -     27529 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                         91 21 +      9229 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          11994 21 -     21137 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                      94 21 +      9131 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                           58 21 -      3730 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28326 21 +     32220 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942423 21 +   6242583 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11676 21 +     20839 ACA----T-----A-T----ATGC----ATATAT-TCACA
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    1904 12 +     27266 ---------------T----ATAT----A----C-TCACA
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tupaia_chinensis.KB320699.1                              2157573 16 +   4065304 ata----t-----a-t----gtat----a----t--cata
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_306982                       0 11 -      4186 ---------------T----GTAT----A----T--CATA
i Tupaia_tana.TupTan_flattened_line_306982               N 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15739454 17 +  33153633 aAG----A-----G-T----ATAT----A----G-TCACA
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54704 19 -     77625 TAG--TAA-----A-T----ATGT----A----C-TCACA
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Vicugna_pacos.KN270157.1                                 5373392 17 -   5488506 AAG----A-----G-T----ATAT----A----T-TCACA
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          2574  8 +    224448 TAG----T-----C-T----AT------------------
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 24
s Zapus_hudsonius.ZapHud_scaffold_11398                      16255  8 +     63895 GTA----T-----A-T----AT------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 21
s Ziphius_cavirostris.ZipCav_flattened_line_761354              11 17 -      1267 AAG----A-----G-T----ATAT----A----G-TCACA
i Ziphius_cavirostris.ZipCav_flattened_line_761354       C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 12248 182 -     43706 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   7643  0 +      8208 C
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73921  0 +    116680 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14071  3 -     78924 I
e Otocyon_megalotis.JAEUCK010005147.1                       463803 189 -    559221 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9152014 1112 -   9404916 T
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190536  0 +    196477 C
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Manis_pentadactyla.KN006162.1                              51623 129 -    317179 I
e Manis_javanica.JSZB01003497.1                              19605 129 +    737560 I
e Lycaon_pictus.CM007581.1                                17958082 1117 -  59628241 T
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64769  0 +   2246927 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1750  0 -      8501 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Canis_lupus_orion.HG994398.1                            18503144 1117 +  63665305 T
e Canis_lupus_familiaris.chr16                            17961842 1117 -  59632846 T
e Canis_lupus_dingo.QKWQ01000480.1                         9037373 1119 -   9314153 T
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     2671 1117 -     43241 T
e CanFam4.chr16                                           17801930 1119 -  60362399 T
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T

a score=0.000000
s hg38.chrUn_KI270753v1                                      10222 45 +     62944 T----AT----A------------TCCG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CAA----------------TAGA-CTTG
s Acinonyx_jubatus.LLWD01001279.1                           828787 40 -   1699592 -------------------------cag--------a----TTG--AT----C----AT-CTTTTCT-CCCC-----AAG-AGG----CTA----------------TAAA-Cttc
i Acinonyx_jubatus.LLWD01001279.1                        I 2 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     72720 23 +     87051 -----------------------------------------------------------------------CTCCATAGA-AGA----CAA----------------T-CAGCTTT
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 23 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     75815 23 -     89534 -----------------------------------------------------------------------CTCCATACC-TGG----CAA----------------TAGG-CTTT
i Allactaga_bullata.AllBul_scaffold_9566                 I 21 C 0
s Allenopithecus_nigroviridis.k141_3361533                   18073 45 -     52922 T----AT----A------------TCAG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         18010 45 -     28001 T----AT----A------------TCAG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8505 45 -     18505 T----AT----A------------TCAG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9358 45 -     12518 T----AT----A------------TCAG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              9815 45 +     51355 T----AT----A------------TCAG--------A----TAG--GC----A----AT-TGTTTCT-C-CCT----ACT-TGG----CCA----------------TAAA-CTTG
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                2922 45 -     36483 T----AT----A------------TCAG--------A----TAG--GC----A----AT-TGTTTCT-C-CCT----ACT-TGG----CCA----------------TAAA-CTTG
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13375 45 +     28687 T----AT----A------------TCAG--------A----TAG--GC----A----AT-TGTTTCT-C-CCT----ACT-TGG----CCA----------------TAAA-CTTG
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 1847 45 +     27940 T----AT----A------------TCAG--------A----TAG--GC----A----AT-TGTTTCT-C-CCT----ACT-TGG----CCA----------------TAAA-CTTG
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            2926 45 -      9457 T----AT----A------------TCAG--------A----TAG--GC----A----AT-TGTTTCT-C-CCT----ACT-TGG----CCA----------------TAAA-CTTG
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             1884 45 +     30492 T----AT----A------------TCAG--------A----TAG--GC----A----AT-TGTTTCT-C-CCT----ACT-TGG----CCA----------------TAAA-CTTG
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              5877 45 +     47717 T----AT----A------------TCAG--------A----TAG--CC----A----AT-TGTTTCT-C-CCT----ACT-TGG----CCA----------------TAAA-CTTG
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              2614 45 +      5663 T----AT----A------------TCAG--------A----TAG--GC----A----AT-TGTTTCT-C-CCT----ACT-TGG----CCA----------------TAAA-CTTG
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             17066 45 +     50774 T----AT----A------------TCAG--------A----TAG--GC----A----AT-TGTTTCT-C-CCT----ACT-TGG----CCA----------------TAAA-CTTG
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          677506 46 -   2318259 T----AC----A------------ACAT--------G----TAT--AT----A----AT-CTTTTCT-CTTCT----GCC-TGG----TCA----------------TAGC-GTTC
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      187053 45 +    412891 T----GT----G------------ACCT--------G----AAA--AT----A----AT-TTTCTCT-TCCCC-----AC-AGG----TCA----------------TAAA-CTTC
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469             99981 46 -    100397 G----AA----A------------ACAG--------G----TAT--AT----A----AT-CTTTTCT-CTCCT----GCC-AAG----TCA----------------TAAA-CTTC
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      14134 23 +     20879 -----------------------------------------------------------------------GT----TCT-GGTAAGATCA----------------TGAC-ATTT
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 24 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6461 45 +     43469 T----GT----G------------ACCT--------G----CAA--AT----A----AT-TTTCTCT-TCCCC-----AC-AGG----TCA----------------TGAG-CTTC
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21210078 45 -  21539123 T----AT----A------------TCAG--------A----CAG--AC----A----AT-TGTTTCT-C-CCT----GCT-GGG----CCA----------------TAAA-CTTG
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               44874 45 -     48001 T----AT----A------------TCAG--------A----CAG--AC----A----AT-TGTTTCT-C-CCT----GCT-GGG----TCA----------------TAAA-CTTG
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 27678 45 -     30947 T----AT----A------------TCAG--------A----CAG--AC----A----AT-TGTTTCT-C-CCT----GCT-GGG----CCA----------------TAAA-CTTG
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9450 45 -     89868 T----AT----A------------TCAG--------A----CAG--AC----A----AT-TGTTTCT-C-CCT----GCT-GGG----CCA----------------TAAA-CTTG
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              13834 45 -     40414 T----AT----A------------TCAG--------A----CAG--AC----A----AT-TGTTTCT-C-CCT----GCT-GGG----CCA----------------TAAA-CTTG
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                21723 45 +     72325 T----AT----A------------TCAG--------A----CAG--AC----A----AT-TGTTTCT-C-CCT----GCT-GGG----TCA----------------TAAA-CTTG
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193354 46 +  23207421 T----AT----A------------ATAG--------G----TAC--AT----A----AT-CTTTTCT-CTCCT----GCT-AGG----TCA----------------TATA-CTTC
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         3819 46 -     18090 T----AT----A------------ATAG--------G----TAC--AT----A----AT-CTTTTCT-CTCCT----GCT-AGG----TCA----------------TATA-CTTC
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    28591 46 +     34529 T----AC----A------------ACAG--------G----TAT--AT----A----AT-CTTTTCT-CTTCT----GCC-AGG----TCA----------------TAAA-CTTT
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    202593 46 -    288883 T----AC----A------------ACAG--------G----TAT--AT----A----AT-CTTTTCT-CTCCT----GCC-AGG----TCA----------------TAAA-CTTC
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20275833 46 +  48749331 T----AC----A------------ACAG--------G----TAT--AT----A----AT-CTTTTCT-CTCCT----GCC-AGG----TCA----------------TAAA-CTTC
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1128386 46 -   1948126 T----AC----A------------ACAG--------G----TAT--AT----A----AT-CTTTTCT-CTCCT----GCC-AGG----TCA----------------TAAA-CTTC
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18086471 46 +  45695690 T----AC----A------------ACAG--------G----TAT--AT----A----AT-CTTTTCT-CTCCT----GCC-AGG----TCA----------------TAAA-CTTC
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2822431 46 +   4408762 T----AC----A------------ACAG--------G----TAT--AT----A----AT-GTTTTCT-CTCCT----GCC-AGG----TCA----------------TAAA-CTTC
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                102700 45 -    122966 T----AT----A------------TCAG--------A----TAG--GC----A----AT-TGTTTCT-C-CCT----CCT-GGG----CCA----------------TAAA-CTTG
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   62203 45 +     81800 T----AT----A------------TCAG--------A----TAG--GC----A----AT-TGTTTCT-C-CCT----CCT-GGG----CCA----------------TAAA-CTTG
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31385 45 -     95584 T----AT----A------------TCAG--------A----TAG--GC----A----AT-TGTTTCT-C-CCT----CCT-GGG----CCA----------------TAAA-CTTG
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55486 45 -    119600 T----AT----A------------TCAG--------A----TAG--GC----A----AT-TGTTTCT-C-CCT----CCT-GGG----CCA----------------TAAA-CTTG
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10003888 61 -  17673402 T----AG----G------------ACAG--------G----TAT--AT----A----AT-CTTTTCT-CTCCA----GCC-AGG----CT-TCGTGTCCTTCCTGTCCAGC-CTTC
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2336360 61 -   7040546 T----AG----G------------ACAG--------G----TAT--AT----A----AT-CTTTTCT-CTCCA----GCC-AGG----CT-TCGTGTCCTTCCTGTCCAGC-CTTC
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  404658 61 -   1652518 T----AG----G------------ACAG--------G----TAT--AT----A----AT-CTTTTCT-CTCCA----GCC-AGG----CT-TCGTGTCCTTCCTGTCCAGC-CTTC
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17800811 39 -  60362399 --------------------------AG--------A----TTG--AC----A----AC-CTTTTAT-CCCC-----TAG-AGA----CCT----------------TAAA-CTTC
i CanFam4.chr16                                          T 1119 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     1554 39 -     43241 --------------------------AG--------A----TTG--AC----A----AC-CTTTTAT-CCCC-----TAG-AGA----CCT----------------TAAA-CTTC
i Canis_lupus_VD.CanFam_VD_scaffold_27089                T 1117 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9036254 39 -   9314153 --------------------------ag--------a----TTG--AC----A----AC-CTTTTAT-CCCC-----TAG-AGA----CCT----------------TAAA-CTTC
i Canis_lupus_dingo.QKWQ01000480.1                       T 1119 C 0
s Canis_lupus_familiaris.chr16                            17960725 39 -  59632846 --------------------------ag--------a----TTG--AC----A----AC-CTTTTAT-CCCC-----TAG-AGA----CCT----------------TAAA-CTTC
i Canis_lupus_familiaris.chr16                           T 1117 C 0
s Canis_lupus_orion.HG994398.1                            18502027 39 +  63665305 --------------------------ag--------a----TTG--AC----A----AC-CTTTTAT-CCCC-----TAG-AGA----CCT----------------TAAA-CTTC
i Canis_lupus_orion.HG994398.1                           T 1117 C 0
s Capra_aegagrus.CM003241.1                               18831612 46 +  46296322 T----AC----A------------ACAT--------G----TAT--AT----A----AT-CTTTTCT-CTTCT----GCC-AGG----TCA----------------TAAC-GTTC
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18062332 46 -  44709034 T----AC----A------------ACAT--------G----TAT--AT----A----AT-CTTTTCT-CTTCT----GCC-AGG----TCA----------------TAAC-GTTC
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    2721 22 -     12242 -----------------------------------------------------------------------CTCCTTACC-AGG----TCA----------------CA-A-TGTT
i Capromys_pilorides.CapPil_scaffold_65020               I 310 C 0
s Carlito_syrichta.NW_007259797.1                           156733 50 -    496798 t----at----g------------acAGGTAGGTGGG----TAG--AC----A----AT-TGTTTT--C-CCT----AC--AGA-----CA----------------CATA-CTTT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6804 45 -     11696 T----GT----G------------AGCT--------G----CAA--AT----A----AT-TTTCTCT-CCCCC-----AC-AGG----TCA----------------TAAG-CTTC
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138709 26 +    179628 T----ATTCACATATGAAAGATACATAG--------A----T--------------------------------------------------------------------------
i Castor_canadensis.CasCan_scaffold_2074                 I 3 I 10
s Catagonus_wagneri.CatWag_scaffold_2839                     95565 18 +    217609 -------------------------------------------G--GT----A----AT-CTCTTCT-CTTCT-------------------------------------------
i Catagonus_wagneri.CatWag_scaffold_2839                 I 13 I 14
s Cavia_aperea.AVPZ01000300.1                             18350915 23 -  23392119 -----------------------------------------------------------------------TTCCTTACC-AGG----TCA----------------TAAa-tgtt
i Cavia_aperea.AVPZ01000300.1                            I 23 C 0
s Cavia_porcellus.DS562891.1                              18363178 23 -  23407841 -----------------------------------------------------------------------TTCCTTACC-AGG----TCA----------------TAaa-tgtt
i Cavia_porcellus.DS562891.1                             I 23 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                       102060 23 +    143979 -----------------------------------------------------------------------TTCCTTACC-AGG----TCA----------------TAAA-TGTT
i Cavia_tschudii.CavTsc_scaffold_8919                    I 23 C 0
s Cephalopachus_bancanus.k141_1423433                         6231 51 +     31688 T----GT----G------------ACAGGTAGGTGGG----TAG--AC----A----AT-TGTTTT--C-CCT----AC-CAGA-----CA----------------CATA-CTTT
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4479032 45 +   4669795 t----at----a------------tcaG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3526 45 +     17872 T----AT----A------------TCAG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4121 45 -     14043 T----AT----A------------TCAG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12216 45 +     27781 T----AT----A------------TCAG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12370 45 -     20310 T----AT----A------------TCAG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15350 45 +     29689 T----AT----A------------TCAG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10106 45 -     20078 T----AT----A------------TCAG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTC
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          18021 45 -     27936 T----AT----A------------TCAG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            6888 49 -     17152 T----AT----A------------TCAG--------ATAGGTAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826620 45 +  39242232 T----AT----A------------TCAG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226124 45 -  21565898 T----AT----A------------TCAG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43243 45 -     53127 T----AT----A------------TCAG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3493 45 +     13442 T----AT----A------------TCAG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       18039 45 -     27947 T----AT----A------------TCAG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1068 45 +     10558 T----AT----A------------TCAG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4073 45 +     14005 T----AT----A------------TCAG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1304 45 -     17098 T----AT----A------------TCAG--------A----TAG--GC----A----AC-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAAA-CTTG
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1180 45 +     17877 T----AT----A------------TCAG--------A----TAG--GC----A----AC-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAAA-CTTG
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            158747 45 -    216457 T----AT----A------------TCAG--------A----TAG--GC----A----AC-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAAA-CTTG
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63222 45 +     76511 T----AT----A------------TCAG--------A----TAG--GC----A----AC-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAAA-CTTG
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254362 23 +   2543920 -----------------------------------------------------------------------CTCCTTACC-AGG----TCA----------------TAAA-TGTT
i Chinchilla_lanigera.JH722012.1                         I 21 C 0
s Chiropotes_israelita.k141_747660                           99829 45 +    146308 T----AT----A------------TCAG--------A----TAG--GC----A----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAAA-CTTG
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          31637 44 -     50570 T-----T----A------------TCAG--------A----TAG--GC----A----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAAA-CTTG
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18431943 45 -  18827391 T----AT----A------------TCAG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18440 45 -     50209 T----AT----A------------TCAG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425444 45 + 135778131 t----at----a------------tcaG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1913945 45 +   2368649 t----at----a------------tcaG--------A----CAG--GT----C----AT-TGTTTCT-C-ACT----ACT-GGG----CCA----------------TAGA-CTTG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952193 45 + 200372422 T----AT----A------------TCAG--------A----CAG--GT----C----AT-TGTTTGT-C-ACT----ACT-GGG----CCA----------------TAGA-CTTG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40470 45 +     84244 T----AT----A------------TCAG--------A----CAG--GT----C----AT-TGTTTCT-C-ACT----ACT-GGG----CCA----------------TAGA-CTTG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549472 35 -  53390261 T----GT----G------------ACAG--------G----TAG--AT----G----AT-CTTTTCTCC-CCT----ACT-AGA--------------------------------
i Condylura_cristata.JH655891.1                          C 0 I 3
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1834 31 +     23735 ----------------------------------------------------A----AT-CTTTTGT-CATCT-----AC-AGG----TCA----------------TAAA-CTTC
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      I 10 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 51974 23 +     63868 -----------------------------------------------------------------------CTCCATGCC-AGA----CAA----------------A-AAGCTTT
i Cricetomys_gambianus.CriGam_scaffold_18520             I 23 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               4213 46 -     19598 T----AT----G------------ACAG--------G----CAG--AT----A----AT-TTTCTTTCC-TCT----AAC-AAG----CCT----------------CAAA-ATTA
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             29966 40 -     87169 -------------------------cag--------a----tTG--AC----C----AT-CTTTTCT-CCCC-----AAG-AGG----CCA----------------TAAA-CTTC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 2 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37660 15 +     51376 -----------------------------------------------------------------------CTCCTTAAC-ATT----TCA-------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 289 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900             1337 23 -     75252 -----------------------------------------------------------------------TTCCTTACC-AGG----TCG----------------TAAA-TGTT
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 25 C 0
s Delphinapterus_leucas.KZ290073.1                        16812985 46 +  35494412 T----AT----A------------ACAG--------G----TAT--AT----A----AT-CTTTTCT-CTCCT----GCT-AGG----TCA----------------TATA-CTTC
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8631802 48 +  20541912 T----GT----G------------ACCT--------G----caa--at----a----at-tttctct-tcccc-----AC-AGA-CGTTCA----------------TAAA-CTCC
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37848 23 +     67921 -----------------------------------------------------------------------CTCCTTACC-AGG----TCA----------------TAAA-TGTT
i Dinomys_branickii.DinBra_scaffold_21862                I 21 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 34977 23 -     42551 -----------------------------------------------------------------------TTGCTTACC-AGG----TCC----------------TAAA-TATT
i Dolichotis_patagonum.DolPat_scaffold_30833             I 25 C 0
s Eidolon_helvum.AWHC01278734.1                                 35 31 +      2334 ----------------------------------------------------A----AT-CTTTTCT-CCCTT-----AC-AGG----TCA----------------TAAA-TTTC
i Eidolon_helvum.AWHC01278734.1                          I 10 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       313379 46 +    607251 T----AC----A------------ACAG--------G----TAT--AT----A----AA-CTTTTCT-CTCTT----GCT-AGG----TCA----------------TACA-CTTC
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          22481 23 -    110024 -----------------------------------------------------------------------CTTCATACC-AGA----CAA----------------T-AAGTTTT
i Ellobius_lutescens.LOEQ01008920.1                      I 23 C 0
s Ellobius_talpinus.LOJH01081419.1                            2401 23 +      8657 -----------------------------------------------------------------------CTTCATACC-AGA----CAA----------------T-AAGTTTT
i Ellobius_talpinus.LOJH01081419.1                       I 23 C 0
s Eptesicus_fuscus.JH977646.1                              2148520 45 -  14770903 t----at----G------------ACAG--------G----CAA--AT----A----AT-TTCCTGT-TTCGT-----AG-AGG----TCA----------------TAAA-CTTC
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Erythrocebus_patas.Contig38                             21208616 45 -  21539334 T----AT----A------------TCAG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12667 46 +    133382 T----AT----A------------ATAG--------G----TAC--AT----A----AT-CTTTTCT-CTCCT----GCT-AGG----TCA----------------TATA-CTTC
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             26608 46 -     44125 T----AT----A------------ACAG--------G----TAC--AT----A----AT-CTTTTCT-CTCCT----GCT-AGG----TCG----------------TATA-CTTC
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20238530 40 + 206538554 -------------------------cag--------a----ttg--aT----C----AT-CTTTTCT-CCCC-----AAG-AGG----CTA----------------TAAA-Cttc
i Felis_catus.CM001381.2                                 I 2 C 0
s Felis_catus_fca126.CM031415.1                           20197405 40 + 205367284 -------------------------cag--------A----TTG--AT----C----AT-CTTTTCT-CCCC-----AAG-AGG----CTA----------------TAAA-Cttc
i Felis_catus_fca126.CM031415.1                          I 2 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 11065 40 -     36744 -------------------------cag--------a----ttg--at----c----at-ctttcct-cccc-----AAG-AGG----CTA----------------TAAA-CTTC
i Felis_nigripes.FelNig_flattened_line_20823             I 2 C 0
s Fukomys_damarensis.KN121974.1                             851877 23 +   3816255 -----------------------------------------------------------------------ctccacccc-agg----tta----------------taaa-tttt
i Fukomys_damarensis.KN121974.1                          I 29 I 150
s Galeopterus_variegatus.GalVar_scaffold_108840               3793 49 -      9135 T----AT----G------------ACAG--------A----TAG--AT----AGAAAAT-TGTTTAT-C-TCT----ATC-AGG----ACA----------------TAAA-CTTT
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     610622 48 -    660261 G----AC----A------------ACAg--------g----tatatat----a----at-ctttttt-atcCT----GCC-AGG----TCA----------------TAAA-CTTC
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            32378 19 +     49224 -----------------------------------------------------------------------CT----ACC-AAG----CCA----------------TAAA-Cttt
i Glis_glis.GliGli_scaffold_19807                        I 25 C 0
s Gorilla_beringei.k141_3596273                              19467 45 -     32273 T----AT----A------------TCCG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CAA----------------TAGA-CTTG
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578336.1                              33191071 45 -  33314783 t----at----a------------tccG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CAA----------------TAGA-CTTG
i Gorilla_gorilla.LT578336.1                             I 248 I 802
s Graphiurus_murinus.GraMur_scaffold_10447                   34067 19 +     78134 -----------------------------------------------------------------------CT----ACT-ATG----CCA----------------TAAA-CTTT
i Graphiurus_murinus.GraMur_scaffold_10447               I 25 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243775 39 +    327341 --------------------------AG--------A----CTG--AT----C----AT-CTTTTCT-CCCC-----AAA-AGG----CCA----------------TAAA-CTTC
i Helogale_parvula.HelPar_flattened_line_2585            I 1 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 19828 46 +     36099 T----AC----A------------ACAT--------G----TAT--AT----A----AT-CTTTTCT-CTTCT----GCC-AGG----TCA----------------TAAC-GTTC
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20663666 23 +  22651954 -----------------------------------------------------------------------ctccttccc-agc----tTA----------------TAAA-TTTT
i Heterocephalus_glaber.JH602082.1                       I 28 C 0
s Hipposideros_armiger.JXIK01000431.1                       111874 31 +   1711038 ----------------------------------------------------A----AT-CTTTTCT-CCCCA-----AC-GGG----TCA----------------TAAA-CTTC
i Hipposideros_armiger.JXIK01000431.1                    I 10 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188                439 31 +      9903 ----------------------------------------------------A----AT-CTTTTCT-CCCCG-----AA-GGG----TCA----------------TAAA-CTTC
i Hipposideros_galeritus.HipGal_scaffold_101188          I 10 C 0
s Hoolock_leuconedys.ctg274                                    438261 45 +    630532 T----AT----A------------TCCG--------A----TAG--GT----C----AT-TGCTTCT-C-CCT----ACT-GGG----CAA----------------TAGA-CTTG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46516 40 +     55795 -------------------------CAG--------A----TTG--AT----C----AT-CTTTTCT-CCCC-----AAG-AGG----CCA----------------TAAA-CTTC
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 2 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23312 23 -    143317 -----------------------------------------------------------------------TTCCTTACC-AGG----TCC----------------TAAG-TGTT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 25 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84559 23 +    135385 -----------------------------------------------------------------------CTCCCTACC-AGG----GTA----------------AAAA-TTTT
i Hystrix_cristata.HysCri_scaffold_5660                  I 25 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7522467 23 -   7955117 -----------------------------------------------------------------------CT----CCC-TACCAGacca----------------tgaa-attt
i Ictidomys_tridecemlineatus.JH393364.1                  I 21 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                 221 46 -     31341 T----AT----A------------ACAG--------G----TAT--AT----A----AT-CTCTTCT-CTCCT----GCT-GGG----TCA----------------TATA-CTTC
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8278548 23 -   9596543 -----------------------------------------------------------------------ctcCATACC-TGG----CAA----------------TAGG-CTTT
i Jaculus_jaculus.JH725527.1                             I 20 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                  191 46 -     18011 T----AT----A------------ACAG--------G----TAT--AT----A----AT-CTTTTCT-CTCCT----GCT-AGG----TCA----------------TATA-CTTC
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         15882 45 -     38430 T----AT----A------------TCAG--------A----CAG--AC----A----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAAA-CTGG
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    18165 45 -     42476 T----AT----G------------ACAG--------A----CAA--AT----A----AT-TTCCTGT-TTCGT-----AG-AGG----TCA----------------TAAA-CTTC
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     8360 45 -     14121 T----AT----G------------ACCA--------A----TAG--AT----AACT-TT----TTCT-C-TCT----ACT-ACG----CCA----------------TAAA-TTTT
i Lepus_americanus.LepAme_scaffold_107385                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             269255 44 -    662738 ------T----A------------ACAG--------G----TAT--AT----A----AT-CTTTTCT-CTCCT----GCT-AGG----TCA----------------TATA-CTTC
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1440574 45 +   1826925 T----AT----A------------TCAG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17956965 39 -  59628241 --------------------------ag--------a----TTG--AC----A----AC-CTTTTAT-CCCC-----TAG-AGA----CCT----------------TAAA-CTTC
i Lycaon_pictus.CM007581.1                               T 1117 C 0
s Macaca_arctoides.k141_2326796                              10384 45 +     40492 T----AT----A------------TCAG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679638 45 +  60120075 T----AT----A------------TCAG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16155 45 -     26193 T----AT----A------------TCAG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            83931 45 -    114318 T----AT----A------------TCAG--------A----TAG--GT----C----AT-TGTTTTT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9622 45 -     23192 T----AT----A------------TCAG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19086 45 -     29190 T----AT----A------------TCAG--------A----TAG--GT----C----AT-TGTTTTT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27664 45 +     37952 T----AT----A------------TCAG--------A----TAG--GT----C----AT-TGTTTTT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842741 45 + 187317192 t----at----a------------tcaG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461319 45 -  25927173 t----at----a------------tcaG--------A----TAG--GT----C----AT-TGTTTTT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83520 45 +     89720 T----AT----A------------TCAG--------A----TAG--GT----C----AT-TGTTTTT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10513 45 +     20474 T----AT----A------------TCAG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10310 45 -     14993 T----AT----A------------TCAG--------A----TAG--GT----C----AT-TGTTTTT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333172 45 -    668171 T----AT----A------------TCAG--------A----TAG--GT----C----AT-TGTTTTT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8622 45 -     24072 T----AT----A------------TCAG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29253 45 -     45290 T----AT----A------------TCAG--------A----TAG--GT----C----AT-TGTTTTT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92204 31 +     94391 ----------------------------------------------------A----AT-ATTTTCT-CCCTC-----AC-AGG----TCA----------------TAAA-CTTC
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 10 C 0
s Mandrillus_leucophaeus.scaffold280                      23940841 45 -  24302211 T----AT----A------------TCAG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-AGG----CCA----------------TAGA-CTTG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354957 45 +    752769 C----AT----A------------TCAG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33104744 23 -  40650429 -----------------------------------------------------------------------CT----CCC-TACCAgacca----------------tgaa-attt
i Marmota_marmota.CZRN01000018.1                         I 21 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        14688 29 -    207569 ----------------------------------------------------A----GT-CT--TCT-CCTCT-----AC-AGA----TCA----------------TAAA-CTTC
i Megaderma_lyra.MegLyr_scaffold_4542                    I 10 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 34728 23 +    140813 -----------------------------------------------------------------------CTTCATACC-AGA----CAA----------------T-AAGCTTT
i Meriones_unguiculatus.MerUng_scaffold_7390             I 23 C 0
s Mesocricetus_auratus.KB708134.1                         12184185 23 -  29670104 -----------------------------------------------------------------------cttcataCC-ATA----CAA----------------T-AGGCTTT
i Mesocricetus_auratus.KB708134.1                        I 23 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    4873 46 +     10310 T----AT----A------------ACAG--------G----TAT--AT----A----AT-CTTTCCT-CTCCT----GCT-AGG----TCA----------------TATA-CTTC
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                17551 45 -     19307 T----GT----G------------AACT--------G----CAA--AT----A----AT-TTTCTCT-TCCCC-----AC-AGG----TCA----------------TAAA-CGTC
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11262462 23 -  27267610 -----------------------------------------------------------------------CTTCATACA-AGA----CAA----------------T-AAGTTTT
i Microtus_ochrogaster.CM001695.1                        I 23 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1851748 45 +   8254450 t----at----g------------aCAG--------G----CAA--AT----A----AT-TTTCTGT-TCCCT-----AC-AGG----TCA----------------TCAA-CTTC
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             35432 45 +     64694 T----AT----G------------ACAG--------G----CAA--AT----A----AT-TTTCTGT-TCCCT-----AC-AGG----TCA----------------TCAA-CTTC
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                          12521 45 -     28506 T----AT----A------------TCAG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    28368 46 -    437263 T----AT----A------------ACAG--------G----TAT--AT----A----AT-CTTTTCT-CTCCT----GCT-AGG----TCA----------------TATA-CTTC
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 143143 45 -    366855 T----AT----G------------ACAT--------G----CAA--AT----A----AT-TTTCTCT-TCCCT-----AT-AGG----TCA----------------TAAA-CTTG
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   2665 46 +     82753 T----GC----A------------ACAG--------G----TAG--AT----C----AT-GTTTTCT-GTCCT----GCC-AGG----TCA----------------TAAA-CGCC
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           8484 45 +     14753 T----AT----G------------ACAG--------G----CAA--AT----A----AT-TTCCTAT-TTTGT-----AA-AGA----TCA----------------TAAA-CTTA
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84363115 23 - 120012414 -----------------------------------------------------------------------cttcataCC-AAA----TAA----------------T-AAGCTTT
i Mus_caroli.LT608237.1                                  I 23 C 0
s Mus_musculus.chr8                                       87652616 23 - 129401213 -----------------------------------------------------------------------CTCCATACC-AAA----TAA----------------T-AAGCTTT
i Mus_musculus.chr8                                      I 23 C 0
s Mus_pahari.LT608297.1                                   31357350 23 -  89631738 -----------------------------------------------------------------------CACCATACC-AAA----TAA----------------T-AAGCTTT
i Mus_pahari.LT608297.1                                  I 23 C 0
s Mus_spretus.CM004101.1                                  90755105 23 - 130317789 -----------------------------------------------------------------------CTCCATACC-AAA----TAA----------------T-AAGCTTT
i Mus_spretus.CM004101.1                                 I 23 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     72911 22 -     80779 -----------------------------------------------------------------------CTCCTTACC-AGG----TCA----------------TA-A-TGTT
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 318 C 0
s Myotis_brandtii.KE162005.1                                282225 45 -  10118263 t----at----G------------ACAG--------G----CAT--AT----A----AT-TTCCTGT-TTTGT-----AG-AGG----TCA----------------TAAA-CTTC
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1589537 45 -   6019432 t----at----g------------aCAG--------G----CAA--AT----A----AT-TTCCTGT-TTTGT-----AG-AGA----TCA----------------TAAA-CTTC
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3905657 45 -   4330536 t----AT----G------------ACAG--------G----CAA--AT----A----AT-TTGCTGT-TTTGT-----AG-AGG----TCA----------------TAAA-CTTC
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_1392844                         56 45 +       242 T----AT----G------------ACAG--------G----CAA--AT----A----AT-TTCCTGT-TTTGT-----AG-AGA----TCA----------------TAAA-CTTC
i Myotis_myotis.MyoMyo_scaffold_1392844                  C 0 I 18
s Nannospalax_galili.KL204047.1                            2036906 22 -   3037898 -----------------------------------------------------------------------TTCCATTCC-AGG----CAA----------------T-AA-TTTT
i Nannospalax_galili.KL204047.1                          I 23 C 0
s Nasalis_larvatus.k141_413338                               18571 45 +     21681 T----AT----A------------TCAG--------A----CAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5867332 46 +   7148211 T----AT----A------------ACAG--------G----TAT--AT----A----AT-CTTTTCT-CTCCT----GCT-AGG----TCA----------------TATA-CTTC
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    759331 45 +    783361 T----AT----G------------ACAT--------G----CAA--AT----A----AG-TTTCTCT-TACCG-----AC-AGG----TTA----------------TAAA-CTTC
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150902 39 -   9404916 --------------------------AG--------A----TTG--AC----A----AC-CTTTTAT-CCCC-----TAG-AGA----CCT----------------TAAA-CTTC
i Nyctereutes_procyonoides.CAJHUB010000658.1             T 1112 C 0
s Ochotona_princeps.JH802162.1                             1365763 42 +   3988456 T----AT----C------------ACCC--------A----CAG--AT----A----TT----TTCT-C-CCT----ACA-AGA----CCA----------------TAAA-TTTT
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         146169 46 +    630418 T----AC----A------------ACAG--------G----TAT--AT----A----AA-CTTTTCT-CTCTT----GCC-ACG----TCA----------------TACA-CTTC
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          78523 48 -    150152 G----AC----A------------ACAG--------G----TATATAT----A----CT-CTTTTCT-CTCCT----GCC-AGG----TCA----------------TAAA-CTTC
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   27122 23 +     28053 -----------------------------------------------------------------------CTTCATACC-AGA----CAA----------------T-AAGTTTT
i Ondatra_zibethicus.OndZib_scaffold_46174               I 23 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    82131 23 +    102263 -----------------------------------------------------------------------CTTCATACC-AGA----CAA----------------C-AAGCTTT
i Onychomys_torridus.OnyTor_scaffold_2986                I 23 C 0
s Orcinus_orca.KB316932.1                                  2783233 46 -  10937097 T----AT----A------------ACAG--------G----TAT--AT----A----AT-GTTTTCT-CTCCT----GCT-AGG----TCA----------------TATA-CTTC
i Orcinus_orca.KB316932.1                                C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67149598 45 + 174332312 T----AT----G------------ACCA--------A----CAG--AT----AACT-TT----TTCT-C-TCT----ACT-ATG----CCA----------------TAAA-TTTT
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       463992 39 -    559221 --------------------------ag--------a----TTG--AC----A----AC-CTTTTAT-CCCC-----TAG-AGA----CCT----------------TAAA-CTTC
i Otocyon_megalotis.JAEUCK010005147.1                    I 189 C 0
s Ovis_aries.CM001607.2                                   17587790 46 +  44047080 T----AC----A------------ACAT--------G----TAT--AT----A----AT-CTTTTCT-CTTCT----GCC-AGG----TCA----------------TAAC-GTTC
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      175782 46 -    191736 T----AC----A------------ACAT--------G----TAT--AT----A----AT-CTTTTCT-CTTCT----GCC-TGG----TCA----------------TAAC-GTTC
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    47568 45 +     80009 t----at----a------------tccG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CAA----------------TAGA-CTTG
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.KZ622849.1                                 25757 45 +    110857 T----AT----A------------TCCG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CAA----------------TAGA-CTTG
i Pan_troglodytes.KZ622849.1                             I 94 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152604 40 +    230217 -------------------------CAG--------A----TTG--AT----C----AT-CTTTTCT-CCCC-----AAG-AGG----CTA----------------TAAA-CTTC
i Panthera_onca.PanOnc_flattened_line_3271               I 2 C 0
s Panthera_pardus.KV860321.1                                265915 40 +  18783137 -------------------------cag--------a----TTG--AT----C----AT-CTTTTCT-CCCC-----AAG-AGG----CTA----------------TAAA-Cttc
i Panthera_pardus.KV860321.1                             I 2 C 0
s Panthera_tigris.KE722367.1                               4722741 40 -   8748460 -------------------------cac--------T----TTG--AT----C----AT-CTTTTCT-CCCC-----AAG-AGG----CTA----------------TAAA-Cttc
i Panthera_tigris.KE722367.1                             I 2 C 0
s Pantholops_hodgsonii.KE114653.1                          1266691 46 -   2937107 T----AC----A------------ACAT--------G----TAT--GT----A----AT-CTTTTCT-CTTCT----GCC-AGG----TCA----------------TAAA-GTTC
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183446647 45 + 183742232 t----at----a------------tcaG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10297 45 +     20448 T----AT----A------------TCAG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567105 45 +  20919399 T----AT----A------------TCAG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   9037 45 +     41871 T----AT----A------------TCAG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12330 45 +     27711 T----AT----A------------TCAG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3329 45 -     11374 T----AT----A------------TCAG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14074 28 -     78924 ------------------------------------------------------------ATTTTCT-CCCC-----AAA-AGG----CCA----------------TAAA-CTTC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 3 C 0
s Peromyscus_maniculatus.KI615324.1                       18196766 23 -  18517816 -----------------------------------------------------------------------CTTCATACC-AGA----CAA----------------C-AAGCTTT
i Peromyscus_maniculatus.KI615324.1                      I 23 C 0
s Petromus_typicus.PetTyp_scaffold_221660                       95 23 -      2102 -----------------------------------------------------------------------CTCCTTACC-AGG----TCA----------------TAAA-TTTT
i Petromus_typicus.PetTyp_scaffold_221660                I 29 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              10289 46 +     63832 T----AT----A------------ACAG--------G----TAT--AT----A----AT-CTTTTCT-CTCCT----GCT-AGG----TCA----------------TATA-CTTC
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            1648 45 +     68526 T----AT----G------------TCAG--------A----CAG--GT----C----AT-TGTTTCT-C-ACT----ACT-GGG----CCA----------------TAGA-CTTG
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        41794 45 +     89929 T----AT----G------------TCAG--------A----CAG--GT----C----AT-TGTTTCT-C-CCT----GCT-GGG----CCA----------------TAGA-CTTG
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43208 45 +     51399 T----AT----G------------TCAG--------A----CAG--GT----C----AT-TGTTTCT-C-CCT----GCT-GGG----CCA----------------TAGA-CTTG
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299445 45 -  14605196 T----AT----G------------TCAG--------A----CAG--GT----C----AT-TGTTTCT-C-ACT----ACT-GGG----CCA----------------TAGA-CTTG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3289 45 +     22620 t----at----G------------ACAG--------G----CAA--AT----A----AT-TTCCAAT-TTCGT-----AG-AGG----TCA----------------TAAA-CTTC
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pithecia_albicans.k141_1476471                              5092 45 +     26961 T----GT----A------------TCAG--------A----CAG--GC----A----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAAA-CTTG
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1237 45 +     23417 T----GT----A------------TCAG--------A----TAG--GC----A----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAAA-CTTG
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                5084 45 +     29694 T----GT----A------------TCAG--------A----TAG--GC----A----AT-TGTTTCT-C-CCT----ACC-GGG----CCA----------------TAAA-CTTG
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          30110 45 +     52772 T----GT----A------------TCAG--------A----CAG--GC----A----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAAA-CTTG
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           5106 45 +     26198 T----GT----A------------TCAG--------A----CAG--GC----A----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAAA-CTTG
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3941654 45 +   4542175 T----GT----A------------TCAG--------A----TAG--GC----A----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAAA-CTTG
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            5070 45 -     23490 T----GT----A------------TCAG--------A----CAG--GC----A----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAAA-CTTG
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9327 45 -     39866 T----AT----A------------TCAG--------A----TAG--GC----A----AC-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAAA-CTTG
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18493 45 +     34906 T----AT----A------------TCAG--------A----TAG--GC----A----AC-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAAA-CTTG
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       22755 45 +     87950 T----AT----A------------TCAG--------A----TAG--GC----A----AC-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAAA-CTTG
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23584 45 +     88961 T----AT----A------------TCAG--------A----TAG--GC----A----AC-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAAA-CTTG
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9255 45 +     39403 T----AT----A------------TCAG--------A----TAG--GC----A----AC-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAAA-CTTG
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          23036 45 -     87928 T----AT----A------------TCAG--------A----TAG--GC----A----AC-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAAA-CTTG
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         29995 45 +     60166 T----AT----A------------TCAG--------A----TAG--GC----A----AC-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAAA-CTTG
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30192 45 +     67232 T----AT----A------------TCAG--------A----TAG--GC----A----AC-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAAA-CTTG
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          25665 45 +     90634 T----AT----A------------TCAG--------A----TAG--GC----A----AC-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAAA-CTTG
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          23037 45 -     89403 T----AT----A------------TCAG--------A----TAG--GC----A----AC-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAAA-CTTG
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189134579 45 + 189387572 t----at----a------------tccG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CAA----------------TAGA-CTTG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9574188 45 +   9816681 t----at----a------------tCCG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CAA----------------TAGA-CTTG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76748 45 -     81375 T----AT----A------------TCAG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8565 45 +     19060 T----AT----A------------TCAG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            12369 23 -     21651 -----------------------------------------------------------------------CTTCATACC-AGA----CAA----------------T-ACGCTTT
i Psammomys_obesus.NESX01036370.1                        I 23 C 0
s Pteronotus_parnellii.KE909381.1                            16623 45 -     21811 t----at----g------------acat--------g----caa--at----a----at-tttctct-tccct-----AC-TGG----TCA----------------TAAA-CTTG
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteropus_alecto.KB030862.1                              22978283 31 +  28871421 ----------------------------------------------------A----AT-CTTTTCT-CCCTT-----AC-AGG----TCA----------------TAAA-CTTC
i Pteropus_alecto.KB030862.1                             I 10 C 0
s Puma_concolor.QAVW01001104.1                            20275800 40 -  38429054 -------------------------cag--------a----TTG--AT----C----AT-CTTTTCT-CCCC-----AAG-AGG----CTA----------------TAAA-Cttc
i Puma_concolor.QAVW01001104.1                           I 2 C 0
s Pygathrix_cinerea.k141_1153803                             18557 45 -     91421 T----AT----A------------TCAG--------A----CAG--GT----C----AT-TATTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612680 45 +   7812017 T----AT----A------------TCAG--------A----CAG--GT----C----AT-TATTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18587 45 -     72585 T----AT----A------------TCAG--------A----CAG--GT----C----AT-TATTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  8000 46 +     55207 T----AC----A------------ACAG--------G----TAT--AT----A----AA-CTTTTCT-CTCTT----GCC-ACG----TCA----------------TACA-CTTC
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53572616 23 +  90668790 -----------------------------------------------------------------------CTCCATACC-AAA----CAA----------------T-AAGCTTT
i Rattus_norvegicus.chr16                                I 18 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        368328 31 -   3329780 ----------------------------------------------------A----AT-GTTTTCT-CCCCT-----AT-GGG----TCA----------------TAAA-CTTC
i Rhinolophus_sinicus.LVEH01000134.1                     I 10 C 0
s Rhinopithecus_bieti.k119_217274                            10255 45 -     11128 T----AT----A------------TCAG--------A----CAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239623 45 - 195417433 t----at----a------------tcaG--------A----CAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675270 45 +   7961872 T----AT----A------------TCAG--------A----CAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89355 31 -     96226 ----------------------------------------------------A----AT-CTTTTCT-CCCTT-----AC-AGG----TCA----------------TAAA-CTTC
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 10 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154606 46 -    313613 C----AT----G------------ACAG--------G----TAG--AT----G----AC-CTTTTCTTC-CCT----ACC-AGA----CCA----------------TGAA-CTTT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                         3429 45 -     12572 T----AT----A------------TCAG--------A----CAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30281 45 +     39453 T----AT----A------------TCAG--------A----CAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGT-CTTG
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           10789 45 +     27826 T----AT----A------------TCAG--------A----CAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10330 45 -     19483 T----AT----A------------TCAG--------A----CAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3628 45 -     12762 T----AT----A------------TCAG--------A----CAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3473 45 +     13763 T----AT----A------------TCAG--------A----CAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     2265 23 -     30804 -----------------------------------------------------------------------CTTCATATT-AGA----CAA----------------T-AAGCTTT
i Sigmodon_hispidus.SigHis_scaffold_42075                I 23 C 0
s Sorex_araneus.JH798187.1                                13652437 47 -  18376816 t----at----g------------ccaa--------a----tag--ag----t----atCTTTTTCTCC-ACT----AAC-AGG----TCT----------------CAAA-GTTC
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1955613 23 -   3870691 -----------------------------------------------------------------------CT----CCC-TACCAGacca----------------tgaa-attt
i Spermophilus_dauricus.KZ294078.1                       I 21 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              19768 39 -    196729 --------------------------AG--------A----TTG--AT----C----AT-CTTTTCT-CCCC-----AAA-AGG----CCA----------------TAAA-CTTC
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6813143 22 +  69701581 -------------------------------------------G--GTATATA----AT-CTTTTCT-CTTCT-------------------------------------------
i Sus_scrofa.CM000828.4                                  I 24 I 14
s Tadarida_brasiliensis.TadBra_scaffold_25820                12669 45 +     41958 T----AA----G------------ACAG--------G----CAA--AT----A----AT-TTTCTGT-GCCCT-----AC-AGG----TCA----------------TAAA-CTTC
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tarsius_lariang.k141_2201908                               27226 51 +     70052 T----AT----G------------ACAGGTAGGTGGG----TAG--AC----A----AT-TGTTTT--C-CCT----ACC-AGG-----CA----------------TATA-CTTT
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                2023 51 -     16117 T----AT----G------------ACAGGTAGGTGGG----TAG--AC----A----AT-TGTTTT--C-CCT----ACC-AGG-----CA----------------TATA-CTTT
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186431953 45 + 186847797 t----at----a------------tcaG--------A----TAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106878 23 +    114563 -----------------------------------------------------------------------TCTCCTATG-AGG----TCA----------------TAAA-TTTT
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 29 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     82896 45 +    610378 T----GT----G------------ACCT--------G----CAA--AT----A----AT-TTTCTCT-TCCCC-----AC-AGG----TCA----------------TAAA-CTTC
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         14367 45 -     20410 T----AT----A------------TCAG--------A----CAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3490 45 -     12674 T----AT----A------------TCAG--------A----CAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14475 45 +     19930 T----AT----A------------TCAG--------A----CAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      10877 45 -     19997 T----AT----A------------TCAG--------A----CAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            51019 45 -     60166 T----AT----A------------TCAG--------A----CAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18481 45 -     27529 T----AT----A------------TCAG--------A----CAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                        112 45 +      9229 T----AT----A------------TCAG--------A----CAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          12015 45 -     21137 T----AT----A------------TCAG--------A----CAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                     115 45 +      9131 T----AT----A------------TCAG--------A----CAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                           79 45 -      3730 T----AT----A------------TCAG--------A----CAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28347 45 +     32220 T----AT----A------------TCAG--------A----CAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942444 45 +   6242583 T----AT----A------------TCAG--------A----CAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11697 45 +     20839 T----AT----A------------TCAG--------A----CAG--GT----C----AT-TGTTTCT-C-CCT----ACT-GGG----CCA----------------TAGA-CTTG
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    1916 48 +     27266 T----GC----A------------ACAG--------G----TATATAT----A----AT-CTTTTCT-ATCCT----TCC-AGG----TCA----------------TAAG-TTTC
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tupaia_chinensis.KB320699.1                              2157589 45 +   4065304 T----GT----G------------ATAA--------A----TGA--AT----A----AT-TGTTTCA-C-TCT----ACC-AGG----CCA----------------TAAA-TTTT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_306982                      11 45 -      4186 T----AT----G------------ATAA--------A----TAA--AT----A----AT-TGTTTCA-C-CCT----ACC-AGG----CCA----------------TAAA-TTTT
i Tupaia_tana.TupTan_flattened_line_306982               C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15739471 46 +  33153633 T----AT----A------------ACAG--------G----TAT--AT----A----AT-CTTTTCT-CTCCT----GCT-AGG----TCA----------------TATA-CTTC
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54723 46 -     77625 T----AT----G------------ACAG--------G----TAG--AT----G----AT-CTTTTCTCT-CCT----ACT-AGA----CCA----------------TAAA-CTTT
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Vicugna_pacos.KN270157.1                                 5373409 61 -   5488506 T----AG----G------------ACAG--------G----TAT--AT----A----AT-CTTTTCT-CTCCA----GCC-AGG----CT-TCGTGTCCTTCCTGTCCAGC-CTTC
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 12430 39 -     43706 --------------------------AG--------A----TTG--AC----A----AC-CTTTTAT-CCCC-----TAG-AGA----CCT----------------TAAA-CTTC
i Vulpes_lagopus.VulLag_flattened_line_30954             I 182 C 0
s Xerus_inauris.XerIna_scaffold_2302                          2606 23 +    224448 -----------------------------------------------------------------------CT----CCT-TAGGAGACCA----------------CGAA-ATTT
i Xerus_inauris.XerIna_scaffold_2302                     I 24 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      16284 23 +     63895 -----------------------------------------------------------------------CTCCATACT-TGG----CAA----------------TAGG-CTTT
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 21 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_761354              28 46 -      1267 T----AT----A------------ACAG--------G----TAT--AT----A----AT-CTTTCCT-CTCCT----GCT-AGG----TCA----------------TATA-CTTC
i Ziphius_cavirostris.ZipCav_flattened_line_761354       C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   7643  0 +      8208 C
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73921  0 +    116680 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190536  0 +    196477 C
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Manis_pentadactyla.KN006162.1                              51623 129 -    317179 I
e Manis_javanica.JSZB01003497.1                              19605 129 +    737560 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64769  0 +   2246927 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1750  0 -      8501 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T

a score=0.000000
s hg38.chrUn_KI270753v1                                      10267 18 +     62944 ACATCCAA-----AT----A--C-TTACTT
s Acinonyx_jubatus.LLWD01001279.1                           828827 13 -   1699592 atattcta-----at----a--t--t----
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 5
s Acomys_cahirinus.AcoCah_scaffold_12655                     72743 14 +     87051 AGGTCCTA-----AC----A--C-TT----
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 4
s Allactaga_bullata.AllBul_scaffold_9566                     75838 13 -     89534 -CATCCCA-----AT----A--C-TT----
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 6
s Allenopithecus_nigroviridis.k141_3361533                   18118 14 -     52922 ACGTCCAA-----AT----A--C-TT----
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         18055 14 -     28001 ACGTCCAA-----AT----A--C-TT----
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8550 14 -     18505 ACGTCCAA-----AT----A--C-TT----
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9403 14 -     12518 ACGTCCAA-----AT----A--C-TT----
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              9860 14 +     51355 ACATCTAA-----AT----G--C-TT----
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                2967 14 -     36483 ACATCTAA-----AT----G--C-TT----
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13420 14 +     28687 ACATCTAA-----AT----G--C-TT----
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 1892 14 +     27940 ACATCTAA-----AT----G--C-TT----
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            2971 14 -      9457 ACATCTAA-----AT----G--C-TT----
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             1929 14 +     30492 ACATCTAA-----AT----G--C-TT----
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              5922 14 +     47717 ACATCCAA-----AT----G--C-TT----
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              2659 14 +      5663 ACATCTAA-----AT----G--C-TT----
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             17111 14 +     50774 ACATCTAA-----AT----G--C-TT----
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          677552 14 -   2318259 ATGTCCTA-----AT----A--C-TC----
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 6
s Anoura_caudifer.AnoCau_scaffold_1412                      187098 14 +    412891 ATGTCCTA-----TT----A--T-CT----
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 6
s Antilocapra_americana.AntAmePen_scaffold_12469            100027 14 -    100397 ATGTCCTA-----AT----A--C-TT----
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 I 6
s Aplodontia_rufa.AprRuf_scaffold_68852                      14157 14 +     20879 ACATCTTA-----AT----C--C-TT----
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 6
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6506 14 +     43469 ATGTCCTG-----TC----A--T-CT----
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 6
s Ateles_geoffroyi_b.tarseq_1536                             21210123 14 -  21539123 ACATCCAA-----AT----G--C-TT----
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               44919 14 -     48001 ACATCCAA-----AT----G--C-TT----
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 27723 14 -     30947 ACATCCAA-----AT----G--C-TT----
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9495 14 -     89868 ACATCCAA-----AT----G--C-TT----
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              13879 14 -     40414 ACATCCAA-----AT----G--C-TT----
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                21768 14 +     72325 ACATCCAA-----AT----G--C-TT----
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193400 14 +  23207421 ATGTCCTA-----AT----A--C-TT----
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 6
s Balaenoptera_bonaerensis.DF707048.1                         3865 14 -     18090 ATGTCCTA-----AT----A--C-TT----
i Balaenoptera_bonaerensis.DF707048.1                    C 0 I 6
s Beatragus_hunteri.BeaHun_scaffold_50177                    28637 14 +     34529 ATGTCCTA-----AT----A--C-TC----
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 6
s Bison_bison.KN261452.1                                    202639 14 -    288883 ATGTCCTA-----AT----A--C-TC----
i Bison_bison.KN261452.1                                 C 0 I 6
s Bos_indicus.CM003047.1                                  20275879 14 +  48749331 ATGTCCTA-----AT----A--C-TC----
i Bos_indicus.CM003047.1                                 C 0 I 6
s Bos_mutus.JH880303.1                                     1128432 14 -   1948126 ATGTCCTA-----AT----A--C-TC----
i Bos_mutus.JH880303.1                                   C 0 I 6
s Bos_taurus.CM000203.6                                   18086517 14 +  45695690 ATGTCCTA-----AT----A--C-TC----
i Bos_taurus.CM000203.6                                  C 0 I 6
s Bubalus_bubalis.KI419123.1                               2822477 14 +   4408762 ATGTCCTA-----AT----A--C-TC----
i Bubalus_bubalis.KI419123.1                             C 0 I 6
s Cacajao_ayresi.k141_552049                                102745 14 -    122966 ACATCCAA-----AT----G--C-TT----
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   62248 14 +     81800 ACATCCAA-----AT----G--C-TT----
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31430 14 -     95584 ACATCCAA-----AT----G--C-TT----
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55531 14 -    119600 ACATCCAA-----AT----G--C-TT----
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10003949 14 -  17673402 ATGTCCTA-----AT----A--C-TT----
i Camelus_bactrianus.KN276810.1                          C 0 I 6
s Camelus_dromedarius.KN272107.1                           2336421 14 -   7040546 ATGTCCTA-----AT----A--C-TT----
i Camelus_dromedarius.KN272107.1                         C 0 I 6
s Camelus_ferus.KB017975.1                                  404719 14 -   1652518 ATGTCCTA-----AT----A--C-TT----
i Camelus_ferus.KB017975.1                               C 0 I 6
s CanFam4.chr16                                           17800850 13 -  60362399 ATGTACTA-----AT----A--T--T----
i CanFam4.chr16                                          C 0 I 6
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     1593 13 -     43241 ATGTACTA-----AT----A--T--T----
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 I 6
s Canis_lupus_dingo.QKWQ01000480.1                         9036293 13 -   9314153 ATGTACTA-----AT----A--T--T----
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 6
s Canis_lupus_familiaris.chr16                            17960764 13 -  59632846 ATGTACTA-----AT----A--T--T----
i Canis_lupus_familiaris.chr16                           C 0 I 6
s Canis_lupus_orion.HG994398.1                            18502066 13 +  63665305 ATGTACTA-----AT----A--T--T----
i Canis_lupus_orion.HG994398.1                           C 0 I 6
s Capra_aegagrus.CM003241.1                               18831658 14 +  46296322 ATGTCCTA-----AT----A--C-TC----
i Capra_aegagrus.CM003241.1                              C 0 I 6
s Capra_hircus.CM004588.1                                 18062378 14 -  44709034 ATGTCCTA-----AT----A--C-TC----
i Capra_hircus.CM004588.1                                C 0 I 6
s Capromys_pilorides.CapPil_scaffold_65020                    2743 11 -     12242 GCA---CA-----AT----A--C-TT----
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 4
s Carlito_syrichta.NW_007259797.1                           156783 14 -    496798 ATGTGCTA-----AT----A--T-TT----
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6849 14 -     11696 ATGTCCTA-----TG----A--C-CT----
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 6
s Catagonus_wagneri.CatWag_scaffold_2839                     95597 14 +    217609 ATGTCCTA-----AT----A--C-TT----
i Catagonus_wagneri.CatWag_scaffold_2839                 I 14 I 6
s Cavia_aperea.AVPZ01000300.1                             18350938 14 -  23392119 atattcta-----at----a--t-tt----
i Cavia_aperea.AVPZ01000300.1                            C 0 I 4
s Cavia_porcellus.DS562891.1                              18363201 14 -  23407841 atattcta-----at----a--t-tt----
i Cavia_porcellus.DS562891.1                             C 0 I 4
s Cavia_tschudii.CavTsc_scaffold_8919                       102083 14 +    143979 ATATTCTA-----AT----A--T-TT----
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 I 4
s Cephalopachus_bancanus.k141_1423433                         6282 14 +     31688 ATGTGCTA-----AT----A--T-TT----
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4479077 14 +   4669795 ACGTCCAA-----AT----A--C-TT----
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3571 14 +     17872 ACGTCCAA-----AT----A--C-TT----
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4166 14 -     14043 ACGTCCAA-----AT----A--C-TT----
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12261 14 +     27781 ACGTCCAA-----AT----A--C-TT----
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12415 14 -     20310 ACGTCCAA-----AT----A--C-TT----
i Cercopithecus_ascanius.k141_1024104                    C 0 I 6
s Cercopithecus_cephus.k141_1078548                          15395 14 +     29689 ACGTCCAA-----AT----A--C-TT----
i Cercopithecus_cephus.k141_1078548                      C 0 I 2
s Cercopithecus_diana.k141_1150327                           10151 14 -     20078 ACGTCCAA-----AT----A--C-TT----
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          18066 14 -     27936 ACGTCCAA-----AT----A--C-TT----
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            6937 14 -     17152 ACGTCCAA-----AT----A--C-TT----
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826665 10 +  39242232 ACGTCCAA-----AT---------------
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226169 14 -  21565898 ACGTCCAA-----AT----A--C-TT----
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43288 14 -     53127 ACGTCCAA-----AT----A--C-TT----
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3538 14 +     13442 ACGTCCAA-----AT----A--C-TT----
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       18084 18 -     27947 ACGTCCAA-----ATACTTA--C-TT----
i Cercopithecus_petaurista.k141_807961                   C 0 I 2
s Cercopithecus_pogonias.k141_2303387                         1113 14 +     10558 ACGTCCAA-----AT----A--C-TT----
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4118 14 +     14005 ACGTCCAA-----AT----A--C-TT----
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1349 14 -     17098 ACATCCAA-----AT----G--C-TT----
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1225 14 +     17877 ACATCCAA-----AT----G--C-TT----
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            158792 14 -    216457 ACATCCAA-----AT----G--C-TT----
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63267 14 +     76511 ACATCCAA-----AT----G--C-TT----
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254385 14 +   2543920 GCATCATA-----AT----A--T-TT----
i Chinchilla_lanigera.JH722012.1                         C 0 I 4
s Chiropotes_israelita.k141_747660                           99874 14 +    146308 ACATCCAA-----AT----T--C-TT----
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          31681 14 -     50570 ACATCCAA-----AT----T--C-TT----
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18431988 14 -  18827391 ACGTCCAA-----AT----A--C-TT----
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18485 14 -     50209 ACGTCCAA-----AT----A--C-TT----
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425489 14 + 135778131 ACGTCCAA-----AT----A--C-TT----
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1913990 14 +   2368649 ACGTCCAA-----GT----A--C-TT----
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952238 14 + 200372422 ACGTCCAA-----GT----A--C-TT----
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40515 10 +     84244 ACGTCCAA-----GT---------------
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549510 18 -  53390261 AAGCCCTAC-TACAA----A--C-TT----
i Condylura_cristata.JH655891.1                          I 3 I 6
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1865 11 +     23735 ATGTTCTA-----AT----A----------
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 I 8
s Cricetomys_gambianus.CriGam_scaffold_18520                 51997 14 +     63868 AGATCCTA-----AG----G--C-TT----
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 8
s Crocidura_indochinensis.CroInd_scaffold_37019               4259 15 -     19598 ATGTCCTAA-TAGAT----A----------
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 I 8
s Cryptoprocta_ferox.CryFer_flattened_line_16129             30006 13 -     87169 ATGTTGTA-----AT----A--T--T----
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 7
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37675  5 +     51376 --------------T----A--T-TT----
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 4
s Dasyprocta_punctata.DasPun_flattened_line_15900             1360 14 -     75252 ATATCTTA-----AT----A--T-TT----
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 4
s Delphinapterus_leucas.KZ290073.1                        16813031 14 +  35494412 ATGTCCTA-----AT----A--C-TT----
i Delphinapterus_leucas.KZ290073.1                       C 0 I 6
s Desmodus_rotundus.KZ672289.1                             8631850 14 +  20541912 ATGTCCTG-----TT----A--T-CT----
i Desmodus_rotundus.KZ672289.1                           C 0 I 6
s Dinomys_branickii.DinBra_scaffold_21862                    37871 14 +     67921 ACATCCTA-----AT----A--T-TT----
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 4
s Dolichotis_patagonum.DolPat_scaffold_30833                 35000 14 -     42551 ATATCCTA-----AT----A--T-TT----
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 I 4
s Eidolon_helvum.AWHC01278734.1                                 66 11 +      2334 ATGTCCTA-----AA----A----------
i Eidolon_helvum.AWHC01278734.1                          C 0 I 7
s Elaphurus_davidianus.JRFZ01104969.1                       313425 14 +    607251 ATGTCCTA-----AT----G--C-TC----
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 6
s Ellobius_lutescens.LOEQ01008920.1                          22504 14 -    110024 AGGTCCTA-----AC----A--C-TT----
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 5
s Ellobius_talpinus.LOJH01081419.1                            2424 14 +      8657 AGGTCCTA-----AC----A--C-TT----
i Ellobius_talpinus.LOJH01081419.1                       C 0 I 5
s Eptesicus_fuscus.JH977646.1                              2148565 12 -  14770903 ACATTCTA-----AT----A--T-------
i Eptesicus_fuscus.JH977646.1                            C 0 I 6
s Erythrocebus_patas.Contig38                             21208661 14 -  21539334 ACGTCCAA-----AT----A--C-TT----
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12713 14 +    133382 ACGTCCTA-----AT----A--C-TT----
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 6
s Eubalaena_japonica.EubJap_flattened_line_31514             26654 14 -     44125 ATGTCCTA-----AT----A--C-TT----
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 I 11
s Felis_catus.CM001381.2                                  20238570 13 + 206538554 atattcta-----at----a--t--t----
i Felis_catus.CM001381.2                                 C 0 I 6
s Felis_catus_fca126.CM031415.1                           20197445 13 + 205367284 atattcta-----at----a--t--t----
i Felis_catus_fca126.CM031415.1                          C 0 I 6
s Felis_nigripes.FelNig_flattened_line_20823                 11105 13 -     36744 ATATTCTA-----AT----A--T--T----
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 6
s Fukomys_damarensis.KN121974.1                             852050 14 +   3816255 aaatccta-----at----a--t-tt----
i Fukomys_damarensis.KN121974.1                          I 150 I 6
s Galeopterus_variegatus.GalVar_scaffold_108840               3842 14 -      9135 GTATCCTA-----AT----A--C-TT----
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 I 2
s Giraffa_tippelskirchi.LVKQ01S007888.1                     610670 14 -    660261 CTGTTCTA-----AT----A--C-TT----
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 I 6
s Glis_glis.GliGli_scaffold_19807                            32397 14 +     49224 atatcctt-----at----a--c-tt----
i Glis_glis.GliGli_scaffold_19807                        C 0 I 8
s Gorilla_beringei.k141_3596273                              19512 18 -     32273 ACATCCAA-----AT----A--C-TTACTT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341648 18 + 186649187 ACATCCAA-----AT----A--C-TTACTT
i Gorilla_gorilla.LT578341.1                             I 45 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   34086 13 +     78134 ACATCCTT-----A-----A--C-Tt----
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 6
s Helogale_parvula.HelPar_flattened_line_2585               243814 13 +    327341 AAGTTCTA-----AT----A--T--T----
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 7
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 19874 14 +     36099 ATGTCCTA-----AT----A--C-TC----
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 I 6
s Heterocephalus_glaber.JH602082.1                        20663689 14 +  22651954 ACAtccta-----at----a--t-tt----
i Heterocephalus_glaber.JH602082.1                       C 0 I 6
s Hipposideros_armiger.JXIK01000431.1                       111905 11 +   1711038 ATGTGCTA-----AT----A----------
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 8
s Hipposideros_galeritus.HipGal_scaffold_101188                470 11 +      9903 GTGTGCTA-----AT----A----------
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 I 9
s Hoolock_leuconedys.ctg274                                    438306 14 +    630532 ACATCCAA-----AT----A--C-TT----
i Hoolock_leuconedys.ctg274                                 C 0 I 4
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46556 13 +     55795 ATGTTCTA-----AT----A--T--T----
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 5
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23335 14 -    143317 ACATTCTA-----AT----A--T-TT----
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 4
s Hystrix_cristata.HysCri_scaffold_5660                      84582 14 +    135385 ACATCCTA-----AT----A--A-TT----
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 6
s Ictidomys_tridecemlineatus.JH393364.1                    7522490 14 -   7955117 atttctta-----at----c--c-tT----
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 6
s Inia_geoffrensis.IniGeo_flattened_line_34779                 267 14 -     31341 ATGTCCTA-----AT----A--C-TT----
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 I 6
s Jaculus_jaculus.JH725527.1                               8278571 13 -   9596543 -CATCCTA-----AT----G--C-TT----
i Jaculus_jaculus.JH725527.1                             C 0 I 6
s Kogia_breviceps.KogBre_flattened_line_81059                  237 14 -     18011 ATGTCCTA-----AT----A--C-TT----
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 I 6
s Lagothrix_lagothricha.k141_1005387                         15927 14 -     38430 ACATCCAA-----AT----G--C-TT----
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    18210 12 -     42476 ATATTCTA-----AT----A--T-------
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 6
s Lepus_americanus.LepAme_scaffold_107385                     8405 14 -     14121 ACATTGTA-----AT----A--C-AT----
i Lepus_americanus.LepAme_scaffold_107385                C 0 I 5
s Lipotes_vexillifer.KE559953.1                             269299 14 -    662738 ATGTCCTA-----AT----A--C-TT----
i Lipotes_vexillifer.KE559953.1                          C 0 I 6
s Lophocebus_aterrimus.ctg367                              1440619 14 +   1826925 ACGTCCAA-----AT----A--C-TT----
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17957004 13 -  59628241 ATGTACTA-----AT----A--T--T----
i Lycaon_pictus.CM007581.1                               C 0 I 6
s Macaca_arctoides.k141_2326796                              10429 14 +     40492 ACGTCCAA-----AT----A--C-TT----
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679683 14 +  60120075 ATGTCCAA-----AT----A--C-TT----
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16200 14 -     26193 ACGTTCAA-----AT----A--C-TT----
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            83976 14 -    114318 ACGTCCAA-----AT----A--C-TT----
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9667 14 -     23192 ACGTCCAA-----AT----A--C-TT----
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19131 14 -     29190 ACGTCCAA-----AT----A--C-TT----
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27709 14 +     37952 ATGTCCAA-----AT----A--C-TT----
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842786 14 + 187317192 ACGTCCAA-----AT----A--C-TT----
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461364 14 -  25927173 ACGTCCAA-----AT----A--C-TT----
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83565 14 +     89720 ATGTCCAA-----AT----A--C-TT----
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10558 14 +     20474 ACGTCCAA-----AT----A--C-TT----
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10355 14 -     14993 ACGTCCAA-----AT----A--C-TT----
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333217 14 -    668171 ATGTCCAA-----AT----A--C-TT----
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8667 14 -     24072 ACGTCCAA-----AT----A--C-TT----
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29298 14 -     45290 ATGTCCAA-----AT----A--C-TT----
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92235 11 +     94391 ATGTCCTA-----AT----A----------
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 7
s Mandrillus_leucophaeus.scaffold280                      23940886 14 -  24302211 ACGTCCAA-----AT----A--C-TT----
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355002 14 +    752769 ACGTCCAA-----AT----A--C-TT----
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33104767 14 -  40650429 atttttta-----at----c--c-tt----
i Marmota_marmota.CZRN01000018.1                         C 0 I 6
s Megaderma_lyra.MegLyr_scaffold_4542                        14717 11 -    207569 ACGTTCTA-----AT----A----------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 11
s Meriones_unguiculatus.MerUng_scaffold_7390                 34751 14 +    140813 AGATCCTA-----AC----A--C-TT----
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 6
s Mesocricetus_auratus.KB708134.1                         12184208 14 -  29670104 AGATGCTA-----AC----A--G-TA----
i Mesocricetus_auratus.KB708134.1                        C 0 I 7
s Mesoplodon_bidens.MesBid_scaffold_108144                    4919 14 +     10310 ATGTCCTA-----AT----A--C-TT----
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 I 6
s Micronycteris_hirsuta.MicHir_scaffold_52381                17596 14 -     19307 ATGTCCTA-----TT----A--T-CT----
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 6
s Microtus_ochrogaster.CM001695.1                         11262485 14 -  27267610 AGGTCCTA-----AC----A--C-TT----
i Microtus_ochrogaster.CM001695.1                        C 0 I 5
s Miniopterus_natalensis.LDJU01000034.1                    1851793 14 +   8254450 ATATCCTA-----AT----GCTT-------
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 6
s Miniopterus_schreibersii.MinSch_scaffold_18080             35477 14 +     64694 ATATCCTA-----AT----GCTT-------
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 6
s Miopithecus_ogouensis.k141_534055                          12566 14 -     28506 ATGTCCAA-----GT----A--C-TT----
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    28414 14 -    437263 ATGTCCTA-----AT----A--C-TT----
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 6
s Mormoops_blainvillei.MorMeg_scaffold_1417                 143188 14 -    366855 ATGTCCTA-----AT----A--T-CT----
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 6
s Moschus_moschiferus.MosMos_scaffold_13123                   2711 14 +     82753 ATGCCCTA-----AC----A--C-TC----
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 6
s Murina_feae.MurFea_scaffold_85699                           8529 12 +     14753 ACAATCTA-----AT----A--T-------
i Murina_feae.MurFea_scaffold_85699                      C 0 I 6
s Mus_caroli.LT608237.1                                   84363138 14 - 120012414 AGATCCTA-----AC----A--C-TC----
i Mus_caroli.LT608237.1                                  C 0 I 6
s Mus_musculus.chr8                                       87652639 14 - 129401213 AGATCCTA-----AC----A--C-TC----
i Mus_musculus.chr8                                      C 0 I 6
s Mus_pahari.LT608297.1                                   31357373 14 -  89631738 AGATCCTA-----AC----A--C-TC----
i Mus_pahari.LT608297.1                                  C 0 I 6
s Mus_spretus.CM004101.1                                  90755128 14 - 130317789 AGATCCTA-----AC----A--C-TC----
i Mus_spretus.CM004101.1                                 C 0 I 6
s Myocastor_coypus.MyoCoy_scaffold_10123                     72933 11 -     80779 GCA---TA-----AT----A--T-TT----
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 I 4
s Myotis_brandtii.KE162005.1                                282270 12 -  10118263 ACAACCTA-----AT----A--T-------
i Myotis_brandtii.KE162005.1                             C 0 I 6
s Myotis_davidii.KB100139.1                                1589582 12 -   6019432 ACAACCTA-----AT----A--T-------
i Myotis_davidii.KB100139.1                              C 0 I 6
s Myotis_lucifugus.GL429869.1                              3905702 12 -   4330536 ACAACCTA-----AT----A--T-------
i Myotis_lucifugus.GL429869.1                            C 0 I 6
s Myotis_myotis.MyoMyo_scaffold_983608                         122 12 +       323 ACAACCTA-----AT----A--T-------
i Myotis_myotis.MyoMyo_scaffold_983608                   n 18 I 136
s Nannospalax_galili.KL204047.1                            2036928 14 -   3037898 GCATCCTA-----AT----A--T-TG----
i Nannospalax_galili.KL204047.1                          C 0 I 8
s Nasalis_larvatus.k141_413338                               18616 14 +     21681 ACGTCCAA-----AT----A--C-TT----
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5867378 14 +   7148211 ATGTCCTA-----AT----A--C-TT----
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 6
s Noctilio_leporinus.NocLep_scaffold_251                    759376 13 +    783361 ATGTCCTA-----AC----C--T-G-----
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 6
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150941 13 -   9404916 ATGTCCTA-----AT----A--T--T----
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 6
s Ochotona_princeps.JH802162.1                             1365805 14 +   3988456 ATATCCTA-----AT----A--C-AT----
i Ochotona_princeps.JH802162.1                           C 0 I 6
s Odocoileus_virginianus.KZ100018.1                         146215 14 +    630418 ACGTCCTA-----AT----A--C-TC----
i Odocoileus_virginianus.KZ100018.1                      C 0 I 6
s Okapia_johnstoni.LVCL01S0005463.1                          78571 14 -    150152 CTGTCCTA-----AT----A--C-TT----
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 6
s Ondatra_zibethicus.OndZib_scaffold_46174                   27145 14 +     28053 AGATCCTA-----AC----A--C-TT----
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 5
s Onychomys_torridus.OnyTor_scaffold_2986                    82154 14 +    102263 AGATCCTA-----AC----A--C-TT----
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 7
s Orcinus_orca.KB316932.1                                  2783279 14 -  10937097 ATGTCCTA-----AT----A--C-TT----
i Orcinus_orca.KB316932.1                                C 0 I 6
s Oryctolagus_cuniculus.CM000791.1                        67149643 14 + 174332312 ACATCCTA-----AT----A--C-AT----
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 5
s Otocyon_megalotis.JAEUCK010005147.1                       464031 13 -    559221 ATGTACTA-----AT----A--T--T----
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 6
s Ovis_aries.CM001607.2                                   17587836 14 +  44047080 ATGTCCTA-----AT----A--C-TC----
i Ovis_aries.CM001607.2                                  C 0 I 6
s Ovis_canadensis.OviCan_scaffold_2572                      175828 14 -    191736 ATGTCCTA-----AT----A--C-TC----
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 I 6
s Pan_paniscus.KQ411613.1                                    47613 18 +     80009 ACATCCAA-----AT----A--C-TTACTT
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.KZ622849.1                                 25802 18 +    110857 ACATCCAA-----AT----A--C-TTACTT
i Pan_troglodytes.KZ622849.1                             C 0 I 117
s Panthera_onca.PanOnc_flattened_line_3271                  152644 13 +    230217 ATATTCTA-----AT----A--T--T----
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 6
s Panthera_pardus.KV860321.1                                265955 13 +  18783137 atattcta-----at----a--t--t----
i Panthera_pardus.KV860321.1                             C 0 I 6
s Panthera_tigris.KE722367.1                               4722781 13 -   8748460 atattcta-----at----a--t--t----
i Panthera_tigris.KE722367.1                             C 0 I 6
s Pantholops_hodgsonii.KE114653.1                          1266737 14 -   2937107 ATGTCCTA-----AT----A--C-TC----
i Pantholops_hodgsonii.KE114653.1                        C 0 I 6
s Papio_anubis.CM001495.2                                183446692 14 + 183742232 ACGTCCAA-----AT----A--C-TT----
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10342 14 +     20448 ACGTCCAA-----AT----A--C-TT----
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567150 14 +  20919399 ACGTCCAA-----AT----A--C-TT----
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   9082 14 +     41871 ACGTCCAA-----AT----A--C-TT----
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12375 14 +     27711 ACGTCCAA-----AT----A--C-TT----
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3374 14 -     11374 ACGTCCAA-----AT----A--C-TT----
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14102 13 -     78924 ATGTTCTA-----AT----A--T--T----
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 7
s Peromyscus_maniculatus.KI615324.1                       18196789 14 -  18517816 AGATCTTA-----AC----A--C-TT----
i Peromyscus_maniculatus.KI615324.1                      C 0 I 7
s Petromus_typicus.PetTyp_scaffold_221660                      118 14 -      2102 ATATCCTA-----AT----A--T-TG----
i Petromus_typicus.PetTyp_scaffold_221660                C 0 I 6
s Phocoena_phocoena.PhoPho_flattened_line_24159              10335 14 +     63832 ATGTCCTA-----AT----A--C-TT----
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 6
s Piliocolobus_badius.k141_1142974                            1693 14 +     68526 ACGTCCAA-----AT----A--C-TT----
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        41839 14 +     89929 ACGTCCAA-----AT----A--C-TT----
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43253 14 +     51399 ACGTCCAA-----AT----A--C-TT----
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299490 14 -  14605196 ACGTCCAA-----AT----A--C-TT----
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3334 12 +     22620 ACATTCTA-----AT----A--T-------
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 6
s Pithecia_albicans.k141_1476471                              5137 14 +     26961 ACATCCAA-----AT----G--C-TT----
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1282 14 +     23417 ACATCCAA-----AT----G--C-TT----
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                5129 14 +     29694 ACATCCAA-----AT----G--C-TT----
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          30155 14 +     52772 ACATCCAA-----AT----G--C-TT----
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           5151 14 +     26198 ACATCCAA-----AT----G--C-TT----
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3941699 14 +   4542175 ACATCCAA-----AT----G--C-TT----
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            5115 14 -     23490 ACATCCAA-----AT----G--C-TT----
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9372 14 -     39866 ACATCCAA-----AT----G--C-TT----
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18538 14 +     34906 ACATTCAA-----AT----G--C-TT----
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       22800 14 +     87950 ACATCCAA-----AT----G--C-TT----
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23629 14 +     88961 ACATCCAA-----AT----G--C-TT----
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9300 14 +     39403 ACATCCAA-----AT----G--C-TT----
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          23081 14 -     87928 ACATCCAA-----AT----G--C-TT----
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         30040 14 +     60166 ACATCCAA-----AT----G--C-TT----
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30237 14 +     67232 ACATCCAA-----AT----G--C-TT----
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          25710 14 +     90634 ACATCCAA-----AT----G--C-TT----
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          23082 14 -     89403 ACATCCAA-----AT----G--C-TT----
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189134624 14 + 189387572 ACATCCAA-----AT----A--C-TT----
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9574233 14 +   9816681 ACATCCAA-----AT----A--C-TT----
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76793 14 -     81375 ACGTCCAA-----AT----A--C-TT----
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8610 14 +     19060 ACGTCCAA-----AT----A--C-TT----
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            12392 14 -     21651 AGATCCTA-----AC----A--C-TT----
i Psammomys_obesus.NESX01036370.1                        C 0 I 6
s Pteronotus_parnellii.KE909381.1                            16668 14 -     21811 GTGTGGTA-----AT----A--T-CT----
i Pteronotus_parnellii.KE909381.1                        C 0 I 6
s Pteropus_alecto.KB030862.1                              22978314 11 +  28871421 ATGTCCTA-----AT----A----------
i Pteropus_alecto.KB030862.1                             C 0 I 8
s Puma_concolor.QAVW01001104.1                            20275840 13 -  38429054 atattcta-----at----a--t--t----
i Puma_concolor.QAVW01001104.1                           C 0 I 6
s Pygathrix_cinerea.k141_1153803                             18602 14 -     91421 ACGTCCCA-----AT----A--C-TT----
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612725 14 +   7812017 ACGTCCCA-----AT----A--C-TT----
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18632 14 -     72585 ACGTCCCA-----AT----A--C-TT----
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  8046 14 +     55207 ATGTCCTA-----AT----A--C-TC----
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 6
s Rattus_norvegicus.chr16                                 53572639 14 +  90668790 AGATCCTA-----AC----A--T-TC----
i Rattus_norvegicus.chr16                                C 0 I 6
s Rhinolophus_sinicus.LVEH01000134.1                        368359 11 -   3329780 ATGTTCTA-----AT----G----------
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 8
s Rhinopithecus_bieti.k119_217274                            10300 14 -     11128 ACGTCCAA-----AT----A--C-TT----
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239668 14 - 195417433 ACGTCCAA-----AT----A--C-TT----
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675315 14 +   7961872 ACGTCCAA-----AT----A--C-TT----
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89386 11 -     96226 ATGTCCTA-----AT----A----------
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 8
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154652 18 -    313613 ATGCCCTAC-TATAA----A--C-CT----
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 6
s Semnopithecus_entellus.k141_1672505                         3474 14 -     12572 ACGTCCAA-----AT----A--C-TT----
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30326 14 +     39453 ACGTCCAA-----AT----A--C-TT----
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           10834 14 +     27826 ACGTCCAA-----AT----A--C-TT----
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10375 14 -     19483 ACGTCCAA-----AT----A--C-TT----
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3673 14 -     12762 ACGTCCAA-----AT----A--C-TT----
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3518 14 +     13763 ACGTCCAA-----AT----A--C-TT----
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     2288 14 -     30804 AGATCCTA-----AC----C--C-TT----
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 I 7
s Sorex_araneus.JH798187.1                                13652484 18 -  18376816 ACATCCTAA-TGCAT----A--C-TT----
i Sorex_araneus.JH798187.1                               C 0 I 6
s Spermophilus_dauricus.KZ294078.1                         1955636 14 -   3870691 atttctta-----at----c--c-tT----
i Spermophilus_dauricus.KZ294078.1                       C 0 I 6
s Suricata_suricatta.SurSur_flattened_line_6629              19807 13 -    196729 AAGTTCTA-----AT----A--T--T----
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 7
s Sus_scrofa.CM000828.4                                    6813179 14 +  69701581 ATGTCCTA-----AT----A--C-TT----
i Sus_scrofa.CM000828.4                                  I 14 I 7
s Tadarida_brasiliensis.TadBra_scaffold_25820                12714 12 +     41958 ATGTCCAA-----AT----A--T-------
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 6
s Tarsius_lariang.k141_2201908                               27277 14 +     70052 ATGTACTA-----AT----A--T-TT----
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                2074 14 -     16117 ATGTACTA-----AT----A--T-TT----
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186431998 14 + 186847797 ACGTCCAA-----AT----A--C-TT----
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106901 14 +    114563 ATATCCTA-----AT----G--T-TG----
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 6
s Tonatia_saurophila.TonSau_scaffold_294                     82941 14 +    610378 ATGTCCTA-----TC----A--T-CT----
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 6
s Trachypithecus_auratus.k141_722599                         14412 14 -     20410 ACGTCCAA-----AT----A--C-TT----
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3535 14 -     12674 ACGTCCAA-----AT----A--C-TT----
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14520 14 +     19930 ACGTCCAA-----AT----A--C-TT----
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      10922 14 -     19997 ACGTCCAA-----AT----A--C-TT----
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            51064 14 -     60166 ACATCCAA-----AT----A--C-TT----
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18526 14 -     27529 ACGTCCAA-----AT----A--C-TT----
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                        157 15 +      9229 ACGTCCAA-----AT----A--CTTT----
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          12060 14 -     21137 ACGTCCAA-----AT----A--C-TT----
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                     160 14 +      9131 ACGTCCAA-----AT----A--C-TT----
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                          124 14 -      3730 ACGTCCAA-----AT----A--C-TT----
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28392 14 +     32220 ACGTCCAA-----AT----A--C-TT----
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942489 14 +   6242583 ACGTCCAA-----AT----A--C-TT----
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11742 14 +     20839 ACGTCCAA-----AT----A--C-TT----
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    1964 14 +     27266 ATGTCCTA-----AT----A--C-TT----
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 I 6
s Tupaia_chinensis.KB320699.1                              2157634 14 +   4065304 ATGTCCTA-----AA----A--C-TT----
i Tupaia_chinensis.KB320699.1                            C 0 I 6
s Tupaia_tana.TupTan_flattened_line_306982                      56 14 -      4186 ATGTCCTA-----AT----A--T-TT----
i Tupaia_tana.TupTan_flattened_line_306982               C 0 I 6
s Tursiops_truncatus.MRVK01000835.1                       15739517 14 +  33153633 ATGTCCTA-----AT----A--C-TT----
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 6
s Uropsilus_gracilis.UroGra_scaffold_12083                   54769 18 -     77625 ATGTCCTAG-TACAT----A--A-TT----
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 6
s Vicugna_pacos.KN270157.1                                 5373470 14 -   5488506 ATGTCCTA-----AT----A--C-TT----
i Vicugna_pacos.KN270157.1                               C 0 I 6
s Vulpes_lagopus.VulLag_flattened_line_30954                 12469 13 -     43706 ATGTCCTA-----AT----A--T--T----
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 6
s Xerus_inauris.XerIna_scaffold_2302                          2629 14 +    224448 ATATCTTA-----AT----A--C-TT----
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 5
s Zapus_hudsonius.ZapHud_scaffold_11398                      16307 14 +     63895 ACACCCTA-----AT----A--C-TT----
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 6
s Ziphius_cavirostris.ZipCav_flattened_line_761354              74 14 -      1267 ATGTCCTA-----AT----A--C-TT----
i Ziphius_cavirostris.ZipCav_flattened_line_761354       C 0 I 6
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   7643  0 +      8208 C
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73921  0 +    116680 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190536  0 +    196477 C
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Manis_pentadactyla.KN006162.1                              51623 129 -    317179 I
e Manis_javanica.JSZB01003497.1                              19605 129 +    737560 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64769  0 +   2246927 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1750  0 -      8501 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Castor_canadensis.CasCan_scaffold_2074                    138735 10 +    179628 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T

a score=0.000000
s hg38.chrUn_KI270753v1                                      10285 2 +     62944 AC
s Allenopithecus_nigroviridis.k141_3361533                   18132 2 -     52922 AC
i Allenopithecus_nigroviridis.k141_3361533               C 0 I 4
s Allochrocebus_lhoesti.k141_4309873                         18069 2 -     28001 AC
i Allochrocebus_lhoesti.k141_4309873                     C 0 I 4
s Allochrocebus_preussi.k141_1442296                          8564 2 -     18505 AC
i Allochrocebus_preussi.k141_1442296                     C 0 I 4
s Allochrocebus_solatus.k141_166128                           9417 2 -     12518 AC
i Allochrocebus_solatus.k141_166128                      C 0 I 4
s Alouatta_belzebul.k141_3560514                              9874 2 +     51355 CC
i Alouatta_belzebul.k141_3560514                         C 0 I 4
s Alouatta_caraya.k141_1701091                                2981 2 -     36483 CC
i Alouatta_caraya.k141_1701091                           C 0 I 4
s Alouatta_discolor.k141_566626                              13434 2 +     28687 CC
i Alouatta_discolor.k141_566626                          C 0 I 4
s Alouatta_juara.k141_1302312                                 1906 2 +     27940 CC
i Alouatta_juara.k141_1302312                            C 0 I 4
s Alouatta_macconnelli.k141_918386                            2985 2 -      9457 CC
i Alouatta_macconnelli.k141_918386                       C 0 I 4
s Alouatta_nigerrima.k141_1929159                             1943 2 +     30492 CC
i Alouatta_nigerrima.k141_1929159                        C 0 I 4
s Alouatta_palliata.k141_2135620                              5936 2 +     47717 CC
i Alouatta_palliata.k141_2135620                         C 0 I 4
s Alouatta_puruensis.k141_362188                              2673 2 +      5663 CC
i Alouatta_puruensis.k141_362188                         C 0 I 4
s Alouatta_seniculus.k141_117119                             17125 2 +     50774 CC
i Alouatta_seniculus.k141_117119                         C 0 I 4
s Ateles_geoffroyi_b.tarseq_1536                             21210137 2 -  21539123 CC
i Ateles_geoffroyi_b.tarseq_1536                            C 0 I 4
s Ateles_belzebuth.k141_445860                               44933 2 -     48001 CC
i Ateles_belzebuth.k141_445860                           C 0 I 4
s Ateles_chamek.k141_1806455                                 27737 2 -     30947 CC
i Ateles_chamek.k141_1806455                             C 0 I 4
s Ateles_geoffroyi_a.k141_833924                                9509 2 -     89868 CC
i Ateles_geoffroyi_a.k141_833924                           C 0 I 4
s Ateles_marginatus.k141_803263                              13893 2 -     40414 CC
i Ateles_marginatus.k141_803263                          C 0 I 4
s Ateles_paniscus.k141_457735                                21782 2 +     72325 CC
i Ateles_paniscus.k141_457735                            C 0 I 4
s Cacajao_ayresi.k141_552049                                102759 2 -    122966 AC
i Cacajao_ayresi.k141_552049                             C 0 I 4
s Cacajao_calvus.k141_5142                                   62262 2 +     81800 AC
i Cacajao_calvus.k141_5142                               C 0 I 4
s Cacajao_hosomi.k141_81245                                  31444 2 -     95584 AC
i Cacajao_hosomi.k141_81245                              C 0 I 4
s Cacajao_melanocephalus.k141_619699                         55545 2 -    119600 AC
i Cacajao_melanocephalus.k141_619699                     C 0 I 4
s Carlito_syrichta.NW_007259797.1                           156797 2 -    496798 AC
i Carlito_syrichta.NW_007259797.1                        C 0 I 4
s Cephalopachus_bancanus.k141_1423433                         6296 2 +     31688 AC
i Cephalopachus_bancanus.k141_1423433                    C 0 I 4
s Cercocebus_atys.KQ010504.1                               4479091 2 +   4669795 AC
i Cercocebus_atys.KQ010504.1                             C 0 I 4
s Cercocebus_chrysogaster.k141_1540778                        3585 2 +     17872 AC
i Cercocebus_chrysogaster.k141_1540778                   C 0 I 4
s Cercocebus_lunulatus.k141_3342297                           4180 2 -     14043 AC
i Cercocebus_lunulatus.k141_3342297                      C 0 I 4
s Cercocebus_torquatus.k141_3057011                          12275 2 +     27781 AC
i Cercocebus_torquatus.k141_3057011                      C 0 I 4
s Cercopithecus_diana.k141_1150327                           10165 2 -     20078 AC
i Cercopithecus_diana.k141_1150327                       C 0 I 4
s Cercopithecus_hamlyni.k141_187466                          18080 2 -     27936 AC
i Cercopithecus_hamlyni.k141_187466                      C 0 I 4
s Cercopithecus_lowei.k141_1854285                            6951 2 -     17152 AC
i Cercopithecus_lowei.k141_1854285                       C 0 I 4
s Cercopithecus_albogularis.ctg5                                38826675 2 +  39242232 AC
i Cercopithecus_albogularis.ctg5                               C 0 I 4
s Cercopithecus_mona.ctg39                                21226183 2 -  21565898 AC
i Cercopithecus_mona.ctg39                               C 0 I 4
s Cercopithecus_neglectus.k141_2526306                       43302 2 -     53127 AC
i Cercopithecus_neglectus.k141_2526306                   C 0 I 4
s Cercopithecus_nictitans.k141_1119862                        3552 2 +     13442 AC
i Cercopithecus_nictitans.k141_1119862                   C 0 I 4
s Cercopithecus_pogonias.k141_2303387                         1127 2 +     10558 AC
i Cercopithecus_pogonias.k141_2303387                    C 0 I 4
s Cercopithecus_roloway.k141_2581234                          4132 2 +     14005 AC
i Cercopithecus_roloway.k141_2581234                     C 0 I 4
s Cheracebus_lucifer.k141_49986                               1363 2 -     17098 AC
i Cheracebus_lucifer.k141_49986                          C 0 I 4
s Cheracebus_lugens.k141_1393925                              1239 2 +     17877 AC
i Cheracebus_lugens.k141_1393925                         C 0 I 4
s Cheracebus_regulus.k141_471822                            158806 2 -    216457 AC
i Cheracebus_regulus.k141_471822                         C 0 I 4
s Cheracebus_torquatus.k141_1170026                          63281 2 +     76511 AC
i Cheracebus_torquatus.k141_1170026                      C 0 I 4
s Chiropotes_israelita.k141_747660                           99888 2 +    146308 AC
i Chiropotes_israelita.k141_747660                       C 0 I 4
s Chiropotes_sagulatus.k141_1421488                          31695 2 -     50570 AC
i Chiropotes_sagulatus.k141_1421488                      C 0 I 4
s Chlorocebus_aethiops.ctg25                              18432002 2 -  18827391 AC
i Chlorocebus_aethiops.ctg25                             C 0 I 4
s Chlorocebus_pygerythrus.k141_1025673                       18499 2 -     50209 AC
i Chlorocebus_pygerythrus.k141_1025673                   C 0 I 4
s Chlorocebus_sabaeus.CM001947.1                         135425503 2 + 135778131 AC
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 4
s Colobus_angolensis.KN981557.1                            1914004 2 +   2368649 AC
i Colobus_angolensis.KN981557.1                          C 0 I 4
s Colobus_guereza.LG01                                   199952252 2 + 200372422 AC
i Colobus_guereza.LG01                                   C 0 I 4
s Colobus_polykomos.k141_906115                              40525 2 +     84244 AC
i Colobus_polykomos.k141_906115                          C 0 I 4
s Erythrocebus_patas.Contig38                             21208675 2 -  21539334 AC
i Erythrocebus_patas.Contig38                            C 0 I 4
s Gorilla_beringei.k141_3596273                              19530 2 -     32273 AC
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341666 2 + 186649187 AC
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hoolock_leuconedys.ctg274                                    438324 2 +    630532 AC
i Hoolock_leuconedys.ctg274                                 I 4 C 0
s Lagothrix_lagothricha.k141_1005387                         15941 2 -     38430 CC
i Lagothrix_lagothricha.k141_1005387                     C 0 I 4
s Lophocebus_aterrimus.ctg367                              1440633 2 +   1826925 AC
i Lophocebus_aterrimus.ctg367                            C 0 I 4
s Macaca_arctoides.k141_2326796                              10443 2 +     40492 AC
i Macaca_arctoides.k141_2326796                          C 0 I 4
s Macaca_assamensis.Contig5                               59679697 2 +  60120075 AT
i Macaca_assamensis.Contig5                              C 0 I 4
s Macaca_cyclopis.k119_18836                                 16214 2 -     26193 AT
i Macaca_cyclopis.k119_18836                             C 0 I 4
s Macaca_fascicularis.k141_814140                            83990 2 -    114318 AC
i Macaca_fascicularis.k141_814140                        C 0 I 4
s Macaca_fuscata.k119_255327                                  9681 2 -     23192 AC
i Macaca_fuscata.k119_255327                             C 0 I 4
s Macaca_leonina.k141_3550399                                19145 2 -     29190 AC
i Macaca_leonina.k141_3550399                            C 0 I 4
s Macaca_maura.k141_2733130                                  27723 2 +     37952 AC
i Macaca_maura.k141_2733130                              C 0 I 4
s Macaca_mulatta.NC_041758.1                             186842800 2 + 187317192 AC
i Macaca_mulatta.NC_041758.1                             C 0 I 4
s Macaca_nemestrina.KQ007038.1                            25461378 2 -  25927173 AC
i Macaca_nemestrina.KQ007038.1                           C 0 I 4
s Macaca_nigra.k141_1655396                                  83579 2 +     89720 AC
i Macaca_nigra.k141_1655396                              C 0 I 4
s Macaca_radiata.k141_3680011                                10572 2 +     20474 AC
i Macaca_radiata.k141_3680011                            C 0 I 4
s Macaca_siberu.k141_635500                                  10369 2 -     14993 AC
i Macaca_siberu.k141_635500                              C 0 I 4
s Macaca_silenus.Contig273                                  333231 2 -    668171 AC
i Macaca_silenus.Contig273                               C 0 I 4
s Macaca_thibetana.k99_256239                                 8681 2 -     24072 AC
i Macaca_thibetana.k99_256239                            C 0 I 4
s Macaca_tonkeana.k141_1498238                               29312 2 -     45290 AC
i Macaca_tonkeana.k141_1498238                           C 0 I 4
s Mandrillus_leucophaeus.scaffold280                      23940900 2 -  24302211 AC
i Mandrillus_leucophaeus.scaffold280                     C 0 I 4
s Mandrillus_sphinx.Contig270                               355016 2 +    752769 AC
i Mandrillus_sphinx.Contig270                            C 0 I 4
s Miopithecus_ogouensis.k141_534055                          12580 2 -     28506 AC
i Miopithecus_ogouensis.k141_534055                      C 0 I 4
s Nasalis_larvatus.k141_413338                               18630 2 +     21681 AC
i Nasalis_larvatus.k141_413338                           C 0 I 4
s Pan_paniscus.KQ411613.1                                    47631 2 +     80009 AC
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146493 2 + 189151597 AC
i Pan_troglodytes.CM009242.2                             I 80 C 0
s Papio_anubis.CM001495.2                                183446706 2 + 183742232 AC
i Papio_anubis.CM001495.2                                C 0 I 4
s Papio_cynocephalus.k141_4307930                            10356 2 +     20448 AC
i Papio_cynocephalus.k141_4307930                        C 0 I 4
s Papio_hamadryas.Contig39                                20567164 2 +  20919399 AC
i Papio_hamadryas.Contig39                               C 0 I 4
s Papio_kindae.k141_1936966                                   9096 2 +     41871 AC
i Papio_kindae.k141_1936966                              C 0 I 4
s Papio_papio.k141_802527                                    12389 2 +     27711 AC
i Papio_papio.k141_802527                                C 0 I 4
s Papio_ursinus.k141_5274964                                  3388 2 -     11374 AC
i Papio_ursinus.k141_5274964                             C 0 I 4
s Piliocolobus_badius.k141_1142974                            1707 2 +     68526 AC
i Piliocolobus_badius.k141_1142974                       C 0 I 4
s Piliocolobus_gordonorum.k141_381342                        41853 2 +     89929 AC
i Piliocolobus_gordonorum.k141_381342                    C 0 I 4
s Piliocolobus_kirkii.k141_448987                            43267 2 +     51399 AC
i Piliocolobus_kirkii.k141_448987                        C 0 I 4
s Piliocolobus_tephrosceles.PDMG02000141.1                14299504 2 -  14605196 AC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 4
s Pithecia_albicans.k141_1476471                              5151 2 +     26961 AC
i Pithecia_albicans.k141_1476471                         C 0 I 4
s Pithecia_chrysocephala.k141_839575                          1296 2 +     23417 AC
i Pithecia_chrysocephala.k141_839575                     C 0 I 4
s Pithecia_hirsuta.k141_305604                                5143 2 +     29694 AC
i Pithecia_hirsuta.k141_305604                           C 0 I 4
s Pithecia_mittermeieri.k141_446740                          30169 2 +     52772 AC
i Pithecia_mittermeieri.k141_446740                      C 0 I 4
s Pithecia_pissinattii.k141_1824269                           5165 2 +     26198 AC
i Pithecia_pissinattii.k141_1824269                      C 0 I 4
s Pithecia_pithecia.tarseq_165                             3941713 2 +   4542175 AC
i Pithecia_pithecia.tarseq_165                           C 0 I 4
s Pithecia_vanzolinii.k141_1697688                            5129 2 -     23490 AC
i Pithecia_vanzolinii.k141_1697688                       C 0 I 4
s Plecturocebus_bernhardi.k141_2549090                        9386 2 -     39866 AC
i Plecturocebus_bernhardi.k141_2549090                   C 0 I 4
s Plecturocebus_brunneus.k141_1495506                        18552 2 +     34906 AC
i Plecturocebus_brunneus.k141_1495506                    C 0 I 4
s Plecturocebus_caligatus.k141_1382851                       22814 2 +     87950 AC
i Plecturocebus_caligatus.k141_1382851                   C 0 I 4
s Plecturocebus_cinerascens.k141_1164729                     23643 2 +     88961 AC
i Plecturocebus_cinerascens.k141_1164729                 C 0 I 4
s Plecturocebus_cupreus.k141_2351393                          9314 2 +     39403 AC
i Plecturocebus_cupreus.k141_2351393                     C 0 I 4
s Plecturocebus_dubius.k141_1058799                          23095 2 -     87928 AC
i Plecturocebus_dubius.k141_1058799                      C 0 I 4
s Plecturocebus_grovesi.k141_2013005                         30054 2 +     60166 AC
i Plecturocebus_grovesi.k141_2013005                     C 0 I 4
s Plecturocebus_hoffmannsi.k141_3303950                      30251 2 +     67232 AC
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 I 4
s Plecturocebus_miltoni.k141_349282                          25724 2 +     90634 AC
i Plecturocebus_miltoni.k141_349282                      C 0 I 4
s Plecturocebus_moloch.k141_1031110                          23096 2 -     89403 AC
i Plecturocebus_moloch.k141_1031110                      C 0 I 4
s Pongo_abelii.CM009266.2                                189134638 2 + 189387572 AC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9574247 2 +   9816681 AC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76807 2 -     81375 AC
i Presbytis_comata.k141_677006                           C 0 I 4
s Presbytis_mitrata.k141_1087752                              8624 2 +     19060 AC
i Presbytis_mitrata.k141_1087752                         C 0 I 4
s Pygathrix_cinerea.k141_1153803                             18616 2 -     91421 AC
i Pygathrix_cinerea.k141_1153803                         C 0 I 4
s Pygathrix_nigripes_b.ctg100                                 7612739 2 +   7812017 AC
i Pygathrix_nigripes_b.ctg100                               C 0 I 4
s Pygathrix_nigripes_a.k141_215492                             18646 2 -     72585 AC
i Pygathrix_nigripes_a.k141_215492                         C 0 I 4
s Rhinopithecus_bieti.k119_217274                            10314 2 -     11128 AC
i Rhinopithecus_bieti.k119_217274                        C 0 I 4
s Rhinopithecus_roxellana.NC_044550.1                     91239682 2 - 195417433 AC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 4
s Rhinopithecus_strykeri.ctg102                            7675329 2 +   7961872 AC
i Rhinopithecus_strykeri.ctg102                          C 0 I 4
s Semnopithecus_entellus.k141_1672505                         3488 2 -     12572 AC
i Semnopithecus_entellus.k141_1672505                    C 0 I 4
s Semnopithecus_hypoleucos.k141_1615806                      30340 2 +     39453 AC
i Semnopithecus_hypoleucos.k141_1615806                  C 0 I 4
s Semnopithecus_johnii.k141_670120                           10848 2 +     27826 AC
i Semnopithecus_johnii.k141_670120                       C 0 I 4
s Semnopithecus_priam.k141_638794                            10389 2 -     19483 AC
i Semnopithecus_priam.k141_638794                        C 0 I 4
s Semnopithecus_schistaceus.k141_1572284                      3687 2 -     12762 AC
i Semnopithecus_schistaceus.k141_1572284                 C 0 I 4
s Semnopithecus_vetulus.k141_910252                           3532 2 +     13763 AC
i Semnopithecus_vetulus.k141_910252                      C 0 I 4
s Tarsius_lariang.k141_2201908                               27291 2 +     70052 AC
i Tarsius_lariang.k141_2201908                           C 0 I 4
s Tarsius_wallacei.k141_254427                                2088 2 -     16117 AC
i Tarsius_wallacei.k141_254427                           C 0 I 4
s Theropithecus_gelada.CM009954.1                        186432012 2 + 186847797 AC
i Theropithecus_gelada.CM009954.1                        C 0 I 4
s Trachypithecus_auratus.k141_722599                         14426 2 -     20410 AC
i Trachypithecus_auratus.k141_722599                     C 0 I 4
s Trachypithecus_crepusculus.k141_582567                      3549 2 -     12674 AC
i Trachypithecus_crepusculus.k141_582567                 C 0 I 4
s Trachypithecus_cristatus.k141_580354                       14534 2 +     19930 AC
i Trachypithecus_cristatus.k141_580354                   C 0 I 4
s Trachypithecus_francoisi.k141_1412647                      10936 2 -     19997 AC
i Trachypithecus_francoisi.k141_1412647                  C 0 I 4
s Trachypithecus_geei.k141_277701                            51078 2 -     60166 AC
i Trachypithecus_geei.k141_277701                        C 0 I 4
s Trachypithecus_germaini.k141_912491                        18540 2 -     27529 AC
i Trachypithecus_germaini.k141_912491                    C 0 I 4
s Trachypithecus_hatinhensis.k141_17719                        172 2 +      9229 AC
i Trachypithecus_hatinhensis.k141_17719                  C 0 I 4
s Trachypithecus_laotum.k141_907409                          12074 2 -     21137 AC
i Trachypithecus_laotum.k141_907409                      C 0 I 4
s Trachypithecus_leucocephalus.k141_101510                     174 2 +      9131 AC
i Trachypithecus_leucocephalus.k141_101510               C 0 I 4
s Trachypithecus_melamera.k141_105182                          138 2 -      3730 AC
i Trachypithecus_melamera.k141_105182                    C 0 I 4
s Trachypithecus_obscurus.k141_190785                        28406 2 +     32220 AC
i Trachypithecus_obscurus.k141_190785                    C 0 I 4
s Trachypithecus_phayrei.ctg124                            5942503 2 +   6242583 AC
i Trachypithecus_phayrei.ctg124                          C 0 I 4
s Trachypithecus_pileatus.k141_2007326                       11756 2 +     20839 AC
i Trachypithecus_pileatus.k141_2007326                   C 0 I 4
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202 0 +      8798 C
e Galago_senegalensis.k141_631886                             7400 0 +     11339 C
e Galago_moholi.ctg2040                                     429710 0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964 2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Mus_pahari.LT608297.1                                   31357387 6 -  89631738 I
e Mus_spretus.CM004101.1                                  90755142 6 - 130317789 I
e Mus_musculus.chr8                                       87652653 6 - 129401213 I
e Mus_caroli.LT608237.1                                   84363152 6 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445 0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734 0 -     33856 C
e Perodicticus_potto.k141_1186926                              597 0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219 0 -      3244 C
e Ziphius_cavirostris.ZipCav_flattened_line_761354              88 6 -      1267 I
e Zapus_hudsonius.ZapHud_scaffold_11398                      16321 6 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Xerus_inauris.XerIna_scaffold_2302                          2643 5 +    224448 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 12482 6 -     43706 I
e Vicugna_pacos.KN270157.1                                 5373484 6 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Uropsilus_gracilis.UroGra_scaffold_12083                   54787 6 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15739531 6 +  33153633 I
e Tupaia_tana.TupTan_flattened_line_306982                      70 6 -      4186 I
e Tupaia_chinensis.KB320699.1                              2157648 6 +   4065304 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_40725                    1978 6 +     27266 I
e Tonatia_saurophila.TonSau_scaffold_294                     82955 6 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_228639                   7643 0 +      8208 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              106915 6 +    114563 I
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73921 0 +    116680 C
e Tadarida_brasiliensis.TadBra_scaffold_25820                12726 6 +     41958 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6813193 7 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629              19820 7 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Spermophilus_dauricus.KZ294078.1                         1955650 6 -   3870691 I
e Sorex_araneus.JH798187.1                                13652502 6 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_42075                     2302 7 -     30804 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    154670 6 -    313613 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                89397 8 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        368370 8 -   3329780 I
e Rattus_norvegicus.chr16                                 53572653 6 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  8060 6 +     55207 I
e Puma_concolor.QAVW01001104.1                            20275853 6 -  38429054 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Pteropus_alecto.KB030862.1                              22978325 8 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Pteronotus_parnellii.KE909381.1                            16682 6 -     21811 I
e Psammomys_obesus.NESX01036370.1                            12406 6 -     21651 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             3346 6 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159              10349 6 +     63832 I
e Petromus_typicus.PetTyp_scaffold_221660                      132 6 -      2102 I
e Peromyscus_maniculatus.KI615324.1                       18196803 7 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14115 7 -     78924 I
e Pantholops_hodgsonii.KE114653.1                          1266751 6 -   2937107 I
e Panthera_tigris.KE722367.1                               4722794 6 -   8748460 I
e Panthera_pardus.KV860321.1                                265968 6 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  152657 6 +    230217 I
e Ovis_canadensis.OviCan_scaffold_2572                      175842 6 -    191736 I
e Ovis_aries.CM001607.2                                   17587850 6 +  44047080 I
e Otocyon_megalotis.JAEUCK010005147.1                       464044 6 -    559221 I
e Oryctolagus_cuniculus.CM000791.1                        67149657 5 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Orcinus_orca.KB316932.1                                  2783293 6 -  10937097 I
e Onychomys_torridus.OnyTor_scaffold_2986                    82168 7 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   27159 5 +     28053 I
e Okapia_johnstoni.LVCL01S0005463.1                          78585 6 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         146229 6 +    630418 I
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Ochotona_princeps.JH802162.1                             1365819 6 +   3988456 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869 0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414 0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947 0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9150954 6 -   9404916 I
e Noctilio_leporinus.NocLep_scaffold_251                    759389 6 +    783361 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5867392 6 +   7148211 I
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Nannospalax_galili.KL204047.1                            2036942 8 -   3037898 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190536 0 +    196477 C
e Myotis_myotis.MyoMyo_scaffold_983608                         134 136 +       323 I
e Myotis_lucifugus.GL429869.1                              3905714 6 -   4330536 I
e Myotis_davidii.KB100139.1                                1589594 6 -   6019432 I
e Myotis_brandtii.KE162005.1                                282282 6 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     72944 4 -     80779 I
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           8541 6 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398 7 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   2725 6 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 143202 6 -    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                    28428 6 -    437263 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Miniopterus_schreibersii.MinSch_scaffold_18080             35491 6 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1851807 6 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11262499 5 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                17610 6 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    4933 6 +     10310 I
e Mesocricetus_auratus.KB708134.1                         12184222 7 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 34765 6 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Megaderma_lyra.MegLyr_scaffold_4542                        14728 11 -    207569 I
e Marmota_marmota.CZRN01000018.1                          33104781 6 -  40650429 I
e Manis_pentadactyla.KN006162.1                              51623 129 -    317179 I
e Manis_javanica.JSZB01003497.1                              19605 129 +    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_8222                 92246 7 +     94391 I
e Lycaon_pictus.CM007581.1                                17957017 6 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             269313 6 -    662738 I
e Lepus_americanus.LepAme_scaffold_107385                     8419 5 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Lasiurus_borealis.LasBor_scaffold_32767                    18222 6 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_81059                  251 6 -     18011 I
e Jaculus_jaculus.JH725527.1                               8278584 6 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_34779                 281 6 -     31341 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7522504 6 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      84596 6 +    135385 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23349 4 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  46569 5 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_101188                481 9 +      9903 I
e Hipposideros_armiger.JXIK01000431.1                       111916 8 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20663703 6 +  22651954 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 19888 6 +     36099 I
e Helogale_parvula.HelPar_flattened_line_2585               243827 7 +    327341 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Graphiurus_murinus.GraMur_scaffold_10447                   34099 6 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            32411 8 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     610684 6 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_108840               3856 2 -      9135 I
e Galagoides_demidoff.k141_1711393                            4689 0 +     41679 C
e Fukomys_damarensis.KN121974.1                             852064 6 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                 11118 6 -     36744 I
e Felis_catus_fca126.CM031415.1                           20197458 6 + 205367284 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Eubalaena_japonica.EubJap_flattened_line_31514             26668 11 -     44125 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           12727 6 +    133382 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2148577 6 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Ellobius_talpinus.LOJH01081419.1                            2438 5 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          22518 5 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       313439 6 +    607251 I
e Eidolon_helvum.AWHC01278734.1                                 77 7 +      2334 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 35014 4 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    37885 4 +     67921 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8631864 6 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16813045 6 +  35494412 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            64769 0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_15900             1374 4 -     75252 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  37680 4 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             30019 7 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_37019               4274 8 -     19598 I
e Cricetulus_griseus.LT883664.1                           11668671 0 + 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_18520                 52011 8 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           1876 8 +     23735 I
e Condylura_cristata.JH655891.1                           17549528 6 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1254399 4 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            1750 0 -      8501 C
e Cercopithecus_petaurista.k141_807961                       18102 2 -     27947 I
e Cercopithecus_cephus.k141_1078548                          15409 2 +     29689 I
e Cercopithecus_ascanius.k141_1024104                        12429 6 -     20310 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                       102097 4 +    143979 I
e Cavia_porcellus.DS562891.1                              18363215 4 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18350952 4 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     95611 6 +    217609 I
e Castor_canadensis.CasCan_scaffold_2074                    138735 10 +    179628 I
e Carollia_perspicillata.CarPer_scaffold_92756                6863 6 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                    2754 4 -     12242 I
e Capra_hircus.CM004588.1                                 18062392 6 -  44709034 I
e Capra_aegagrus.CM003241.1                               18831672 6 +  46296322 I
e Canis_lupus_orion.HG994398.1                            18502079 6 +  63665305 I
e Canis_lupus_familiaris.chr16                            17960777 6 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9036306 6 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     1606 6 -     43241 I
e CanFam4.chr16                                           17800863 6 -  60362399 I
e Camelus_ferus.KB017975.1                                  404733 6 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2336435 6 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10003963 6 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2822491 6 +   4408762 I
e Bos_taurus.CM000203.6                                   18086531 6 +  45695690 I
e Bos_mutus.JH880303.1                                     1128446 6 -   1948126 I
e Bos_indicus.CM003047.1                                  20275893 6 +  48749331 I
e Bison_bison.KN261452.1                                    202653 6 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    28651 6 +     34529 I
e Balaenoptera_bonaerensis.DF707048.1                         3879 6 -     18090 I
e Balaenoptera_acutorostrata.KI537508.1                   15193414 6 +  23207421 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6520 6 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         538 0 +      5281 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      14171 6 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_12469            100041 6 -    100397 I
e Anoura_caudifer.AnoCau_scaffold_1412                      187112 6 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          677566 6 -   2318259 I
e Allactaga_bullata.AllBul_scaffold_9566                     75851 6 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T
e Acomys_cahirinus.AcoCah_scaffold_12655                     72757 4 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           828840 5 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      10287 10 +     62944 AGT---ATGAA---GT
s Acinonyx_jubatus.LLWD01001279.1                           828845 10 -   1699592 taC---ATCAA---GT
i Acinonyx_jubatus.LLWD01001279.1                        I 5 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     72761  2 +     87051 TG--------------
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 4 I 8
s Allactaga_bullata.AllBul_scaffold_9566                     75857  2 -     89534 TG--------------
i Allactaga_bullata.AllBul_scaffold_9566                 I 6 I 8
s Allenopithecus_nigroviridis.k141_3361533                   18138 10 -     52922 AGT---ATCAA---GT
i Allenopithecus_nigroviridis.k141_3361533               I 4 C 0
s Allochrocebus_lhoesti.k141_4309873                         18075 10 -     28001 AGT---ATCAA---GT
i Allochrocebus_lhoesti.k141_4309873                     I 4 C 0
s Allochrocebus_preussi.k141_1442296                          8570 10 -     18505 AGT---ATCAA---GT
i Allochrocebus_preussi.k141_1442296                     I 4 C 0
s Allochrocebus_solatus.k141_166128                           9423 10 -     12518 AGT---ATCAA---GT
i Allochrocebus_solatus.k141_166128                      I 4 C 0
s Alouatta_belzebul.k141_3560514                              9880 10 +     51355 TGC---ATGAA---GT
i Alouatta_belzebul.k141_3560514                         I 4 C 0
s Alouatta_caraya.k141_1701091                                2987 10 -     36483 TGC---ATGAA---GT
i Alouatta_caraya.k141_1701091                           I 4 C 0
s Alouatta_discolor.k141_566626                              13440 10 +     28687 TGC---ATGAA---GT
i Alouatta_discolor.k141_566626                          I 4 C 0
s Alouatta_juara.k141_1302312                                 1912 10 +     27940 TGC---ATGAA---GT
i Alouatta_juara.k141_1302312                            I 4 C 0
s Alouatta_macconnelli.k141_918386                            2991 10 -      9457 TGC---GTGAA---GT
i Alouatta_macconnelli.k141_918386                       I 4 C 0
s Alouatta_nigerrima.k141_1929159                             1949 10 +     30492 TGC---GTGAA---GT
i Alouatta_nigerrima.k141_1929159                        I 4 C 0
s Alouatta_palliata.k141_2135620                              5942 10 +     47717 TGC---GTGAA---GT
i Alouatta_palliata.k141_2135620                         I 4 C 0
s Alouatta_puruensis.k141_362188                              2679 10 +      5663 TGC---ATGAA---GC
i Alouatta_puruensis.k141_362188                         I 4 C 0
s Alouatta_seniculus.k141_117119                             17131 10 +     50774 TGC---ATGAA---GT
i Alouatta_seniculus.k141_117119                         I 4 C 0
s Ammotragus_lervia.NIVO01071767.1                          677572 10 -   2318259 TGC---ACCAA---GT
i Ammotragus_lervia.NIVO01071767.1                       I 6 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      187118 10 +    412891 TAC---ACCAA---GT
i Anoura_caudifer.AnoCau_scaffold_1412                   I 6 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469            100047 10 -    100397 TAC---ATCAA---GT
i Antilocapra_americana.AntAmePen_scaffold_12469         I 6 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      14177  2 +     20879 TG--------------
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 6 I 1
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6526 10 +     43469 TAC---ACCAA---GT
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 6 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21210143 10 -  21539123 TGC---ATGAA---GT
i Ateles_geoffroyi_b.tarseq_1536                            I 4 C 0
s Ateles_belzebuth.k141_445860                               44939 10 -     48001 TGC---ACGAA---GT
i Ateles_belzebuth.k141_445860                           I 4 C 0
s Ateles_chamek.k141_1806455                                 27743 10 -     30947 TGC---ACGAA---GT
i Ateles_chamek.k141_1806455                             I 4 C 0
s Ateles_geoffroyi_a.k141_833924                                9515 10 -     89868 TGC---ATGAA---GT
i Ateles_geoffroyi_a.k141_833924                           I 4 C 0
s Ateles_marginatus.k141_803263                              13899 10 -     40414 TGC---ACGAA---GT
i Ateles_marginatus.k141_803263                          I 4 C 0
s Ateles_paniscus.k141_457735                                21788 10 +     72325 TGC---ACGAA---GT
i Ateles_paniscus.k141_457735                            I 4 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193420 10 +  23207421 TAC---ATCAA---GT
i Balaenoptera_acutorostrata.KI537508.1                  I 6 C 0
s Balaenoptera_bonaerensis.DF707048.1                         3885 10 -     18090 TAC---ATCAA---GT
i Balaenoptera_bonaerensis.DF707048.1                    I 6 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    28657 10 +     34529 TAC---ACCAA---GT
i Beatragus_hunteri.BeaHun_scaffold_50177                I 6 C 0
s Bison_bison.KN261452.1                                    202659 10 -    288883 TAC---ATCAA---GT
i Bison_bison.KN261452.1                                 I 6 C 0
s Bos_indicus.CM003047.1                                  20275899 10 +  48749331 TAC---ATCAA---GT
i Bos_indicus.CM003047.1                                 I 6 C 0
s Bos_mutus.JH880303.1                                     1128452 10 -   1948126 TAC---ATCAA---GT
i Bos_mutus.JH880303.1                                   I 6 C 0
s Bos_taurus.CM000203.6                                   18086537 10 +  45695690 TAC---ATCAA---GT
i Bos_taurus.CM000203.6                                  I 6 C 0
s Bubalus_bubalis.KI419123.1                               2822497 10 +   4408762 CAC---ATCAA---GT
i Bubalus_bubalis.KI419123.1                             I 6 C 0
s Cacajao_ayresi.k141_552049                                102765 10 -    122966 TGC---TTGAA---GT
i Cacajao_ayresi.k141_552049                             I 4 C 0
s Cacajao_calvus.k141_5142                                   62268 10 +     81800 TGC---TTGAA---GT
i Cacajao_calvus.k141_5142                               I 4 C 0
s Cacajao_hosomi.k141_81245                                  31450 10 -     95584 TGC---TTGAA---GT
i Cacajao_hosomi.k141_81245                              I 4 C 0
s Cacajao_melanocephalus.k141_619699                         55551 10 -    119600 TGC---TTGAA---GT
i Cacajao_melanocephalus.k141_619699                     I 4 C 0
s Camelus_bactrianus.KN276810.1                           10003969 10 -  17673402 tac---atcaa---at
i Camelus_bactrianus.KN276810.1                          I 6 C 0
s Camelus_dromedarius.KN272107.1                           2336441 10 -   7040546 tac---atcaa---at
i Camelus_dromedarius.KN272107.1                         I 6 C 0
s Camelus_ferus.KB017975.1                                  404739 10 -   1652518 tac---atcaa---at
i Camelus_ferus.KB017975.1                               I 6 C 0
s CanFam4.chr16                                           17800869 10 -  60362399 CAC---ACCAA---GC
i CanFam4.chr16                                          I 6 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     1612 10 -     43241 CAC---ACCAA---GC
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 6 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9036312 10 -   9314153 CAC---ACCAA---GC
i Canis_lupus_dingo.QKWQ01000480.1                       I 6 C 0
s Canis_lupus_familiaris.chr16                            17960783 10 -  59632846 CAC---ACCAA---GC
i Canis_lupus_familiaris.chr16                           I 6 C 0
s Canis_lupus_orion.HG994398.1                            18502085 10 +  63665305 CAC---ACCAA---GC
i Canis_lupus_orion.HG994398.1                           I 6 C 0
s Capra_aegagrus.CM003241.1                               18831678 10 +  46296322 TGC---ACCAA---GT
i Capra_aegagrus.CM003241.1                              I 6 C 0
s Capra_hircus.CM004588.1                                 18062398 10 -  44709034 TGC---ACCAA---GT
i Capra_hircus.CM004588.1                                I 6 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    2758  2 -     12242 TG--------------
i Capromys_pilorides.CapPil_scaffold_65020               I 4 I 8
s Carlito_syrichta.NW_007259797.1                           156803 10 -    496798 TTC---AGCAA---gt
i Carlito_syrichta.NW_007259797.1                        I 4 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6869 10 -     11696 TAC---GCCAA---GA
i Carollia_perspicillata.CarPer_scaffold_92756           I 6 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     95617 10 +    217609 TCC---ATCAG---GC
i Catagonus_wagneri.CatWag_scaffold_2839                 I 6 C 0
s Cavia_aperea.AVPZ01000300.1                             18350956  2 -  23392119 TG--------------
i Cavia_aperea.AVPZ01000300.1                            I 4 I 8
s Cavia_porcellus.DS562891.1                              18363219  2 -  23407841 TG--------------
i Cavia_porcellus.DS562891.1                             I 4 I 8
s Cavia_tschudii.CavTsc_scaffold_8919                       102101  2 +    143979 TG--------------
i Cavia_tschudii.CavTsc_scaffold_8919                    I 4 I 8
s Cephalopachus_bancanus.k141_1423433                         6302 10 +     31688 TTC---ACCAA---GT
i Cephalopachus_bancanus.k141_1423433                    I 4 C 0
s Cercocebus_atys.KQ010504.1                               4479097 10 +   4669795 AGT---ATCAA---gt
i Cercocebus_atys.KQ010504.1                             I 4 C 0
s Cercocebus_chrysogaster.k141_1540778                        3591 10 +     17872 AGT---ATCAA---GT
i Cercocebus_chrysogaster.k141_1540778                   I 4 C 0
s Cercocebus_lunulatus.k141_3342297                           4186 10 -     14043 AGT---ATCAA---GT
i Cercocebus_lunulatus.k141_3342297                      I 4 C 0
s Cercocebus_torquatus.k141_3057011                          12281 10 +     27781 AGT---ATCAA---GT
i Cercocebus_torquatus.k141_3057011                      I 4 C 0
s Cercopithecus_ascanius.k141_1024104                        12435 10 -     20310 AGT---ATCAA---GT
i Cercopithecus_ascanius.k141_1024104                    I 6 C 0
s Cercopithecus_cephus.k141_1078548                          15411 10 +     29689 AGT---ATCAA---GT
i Cercopithecus_cephus.k141_1078548                      I 2 C 0
s Cercopithecus_diana.k141_1150327                           10171 10 -     20078 AGT---ATCAA---GT
i Cercopithecus_diana.k141_1150327                       I 4 C 0
s Cercopithecus_hamlyni.k141_187466                          18086 10 -     27936 AGT---ATCAA---GT
i Cercopithecus_hamlyni.k141_187466                      I 4 C 0
s Cercopithecus_lowei.k141_1854285                            6957 10 -     17152 AGT---ATCAA---GT
i Cercopithecus_lowei.k141_1854285                       I 4 C 0
s Cercopithecus_albogularis.ctg5                                38826681 10 +  39242232 AGT---ATCAA---GT
i Cercopithecus_albogularis.ctg5                               I 4 C 0
s Cercopithecus_mona.ctg39                                21226189 10 -  21565898 AGT---ATCAA---GT
i Cercopithecus_mona.ctg39                               I 4 C 0
s Cercopithecus_neglectus.k141_2526306                       43308 10 -     53127 AGT---ATCAA---GT
i Cercopithecus_neglectus.k141_2526306                   I 4 C 0
s Cercopithecus_nictitans.k141_1119862                        3558 10 +     13442 AGT---ATCAA---GT
i Cercopithecus_nictitans.k141_1119862                   I 4 C 0
s Cercopithecus_petaurista.k141_807961                       18104 10 -     27947 AGT---ATCAA---GT
i Cercopithecus_petaurista.k141_807961                   I 2 C 0
s Cercopithecus_pogonias.k141_2303387                         1133 10 +     10558 AGT---ATCAA---GT
i Cercopithecus_pogonias.k141_2303387                    I 4 C 0
s Cercopithecus_roloway.k141_2581234                          4138 10 +     14005 AGT---ATCAA---GT
i Cercopithecus_roloway.k141_2581234                     I 4 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1750  8 -      8501 --C---ACCAA---GC
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheracebus_lucifer.k141_49986                               1369 10 -     17098 TAC---TTGAA---GT
i Cheracebus_lucifer.k141_49986                          I 4 C 0
s Cheracebus_lugens.k141_1393925                              1245 10 +     17877 TAC---TTGAA---GT
i Cheracebus_lugens.k141_1393925                         I 4 C 0
s Cheracebus_regulus.k141_471822                            158812 10 -    216457 TAC---TTGAA---GT
i Cheracebus_regulus.k141_471822                         I 4 C 0
s Cheracebus_torquatus.k141_1170026                          63287 10 +     76511 TAC---TTGAA---GA
i Cheracebus_torquatus.k141_1170026                      I 4 C 0
s Chinchilla_lanigera.JH722012.1                           1254403  2 +   2543920 TG--------------
i Chinchilla_lanigera.JH722012.1                         I 4 I 8
s Chiropotes_israelita.k141_747660                           99894 10 +    146308 TGC---TTGCA---GT
i Chiropotes_israelita.k141_747660                       I 4 C 0
s Chiropotes_sagulatus.k141_1421488                          31701 10 -     50570 TGC---TTGCA---GT
i Chiropotes_sagulatus.k141_1421488                      I 4 C 0
s Chlorocebus_aethiops.ctg25                              18432008 10 -  18827391 AGT---ATCAA---GT
i Chlorocebus_aethiops.ctg25                             I 4 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18505 10 -     50209 AGT---ATCAA---GT
i Chlorocebus_pygerythrus.k141_1025673                   I 4 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425509 10 + 135778131 AGT---ATCAA---gt
i Chlorocebus_sabaeus.CM001947.1                         I 4 C 0
s Colobus_angolensis.KN981557.1                            1914010 10 +   2368649 AGT---ATCAA---gt
i Colobus_angolensis.KN981557.1                          I 4 C 0
s Colobus_guereza.LG01                                   199952258 10 + 200372422 AGT---ATCAA---GT
i Colobus_guereza.LG01                                   I 4 C 0
s Colobus_polykomos.k141_906115                              40531 10 +     84244 AGT---ATCAA---GT
i Colobus_polykomos.k141_906115                          I 4 C 0
s Condylura_cristata.JH655891.1                           17549534 10 -  53390261 TAT---ACCAA---CT
i Condylura_cristata.JH655891.1                          I 6 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1884 10 +     23735 TGT---ACCAA---GT
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      I 8 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 52019  1 +     63868 ---------------T
i Cricetomys_gambianus.CriGam_scaffold_18520             I 8 I 7
s Crocidura_indochinensis.CroInd_scaffold_37019               4282 10 -     19598 TCT---ATAAA---GT
i Crocidura_indochinensis.CroInd_scaffold_37019          I 8 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             30026 10 -     87169 CAC---ACCAA---GT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 7 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37684  2 +     51376 TG--------------
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 4 I 8
s Dasyprocta_punctata.DasPun_flattened_line_15900             1378  2 -     75252 TG--------------
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 4 I 8
s Dasypus_novemcinctus.JH564415.1                            64769  8 +   2246927 --C---ACCAA---GC
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16813051 10 +  35494412 TAC---ATCAA---GC
i Delphinapterus_leucas.KZ290073.1                       I 6 C 0
s Desmodus_rotundus.KZ672289.1                             8631870 10 +  20541912 TAC---ACCAA---GT
i Desmodus_rotundus.KZ672289.1                           I 6 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37889  2 +     67921 TG--------------
i Dinomys_branickii.DinBra_scaffold_21862                I 4 I 8
s Dolichotis_patagonum.DolPat_scaffold_30833                 35018  2 -     42551 TG--------------
i Dolichotis_patagonum.DolPat_scaffold_30833             I 4 I 8
s Eidolon_helvum.AWHC01278734.1                                 84 10 +      2334 TAT---GCCAA---GT
i Eidolon_helvum.AWHC01278734.1                          I 7 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       313445 10 +    607251 TAC---ATCAA---GT
i Elaphurus_davidianus.JRFZ01104969.1                    I 6 C 0
s Ellobius_lutescens.LOEQ01008920.1                          22523  2 -    110024 TA--------------
i Ellobius_lutescens.LOEQ01008920.1                      I 5 I 8
s Ellobius_talpinus.LOJH01081419.1                            2443  2 +      8657 TA--------------
i Ellobius_talpinus.LOJH01081419.1                       I 5 I 8
s Eptesicus_fuscus.JH977646.1                              2148583 10 -  14770903 TAC---ACCAA---GT
i Eptesicus_fuscus.JH977646.1                            I 6 C 0
s Erythrocebus_patas.Contig38                             21208681 10 -  21539334 AGT---ATCAA---GT
i Erythrocebus_patas.Contig38                            I 4 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12733 10 +    133382 TAC---ATCAA---GT
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 6 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             26679 10 -     44125 TAC---ATCAA---GT
i Eubalaena_japonica.EubJap_flattened_line_31514         I 11 C 0
s Felis_catus.CM001381.2                                  20238589 10 + 206538554 tac---ATCAA---GT
i Felis_catus.CM001381.2                                 I 6 C 0
s Felis_catus_fca126.CM031415.1                           20197464 10 + 205367284 tac---ATCAA---GT
i Felis_catus_fca126.CM031415.1                          I 6 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 11124 10 -     36744 TAC---ATCAA---GG
i Felis_nigripes.FelNig_flattened_line_20823             I 6 C 0
s Fukomys_damarensis.KN121974.1                             852070  2 +   3816255 tg--------------
i Fukomys_damarensis.KN121974.1                          I 6 I 8
s Galeopterus_variegatus.GalVar_scaffold_108840               3858 10 -      9135 TGC---ACAAA---GT
i Galeopterus_variegatus.GalVar_scaffold_108840          I 2 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     610690 10 -    660261 TAC---ATCAA---GT
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 6 C 0
s Glis_glis.GliGli_scaffold_19807                            32419  1 +     49224 ---------------t
i Glis_glis.GliGli_scaffold_19807                        I 8 I 410
s Gorilla_beringei.k141_3596273                              19532 10 -     32273 AGT---ATGAA---GT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341668 10 + 186649187 AGT---ATGAA---GT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   34105  1 +     78134 ---------------t
i Graphiurus_murinus.GraMur_scaffold_10447               I 6 I 742
s Helogale_parvula.HelPar_flattened_line_2585               243834 10 +    327341 CAT---ACCAA---GT
i Helogale_parvula.HelPar_flattened_line_2585            I 7 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 19894 10 +     36099 TGC---ACCAA---GT
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 6 C 0
s Heterocephalus_glaber.JH602082.1                        20663709  2 +  22651954 tg--------------
i Heterocephalus_glaber.JH602082.1                       I 6 I 5
s Hipposideros_armiger.JXIK01000431.1                       111924 10 +   1711038 TAT---ACCAA---GT
i Hipposideros_armiger.JXIK01000431.1                    I 8 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188                490 10 +      9903 TAT---ACCAA---GT
i Hipposideros_galeritus.HipGal_scaffold_101188          I 9 C 0
s Hoolock_leuconedys.ctg274                                    438326 10 +    630532 AGT---ATCAA---GT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46574 10 +     55795 CAC---ACCAA---GT
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 5 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23353  2 -    143317 TG--------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 4 I 8
s Hystrix_cristata.HysCri_scaffold_5660                      84602  2 +    135385 TG--------------
i Hystrix_cristata.HysCri_scaffold_5660                  I 6 I 8
s Ictidomys_tridecemlineatus.JH393364.1                    7522510  2 -   7955117 TG--------------
i Ictidomys_tridecemlineatus.JH393364.1                  I 6 I 1
s Inia_geoffrensis.IniGeo_flattened_line_34779                 287 10 -     31341 TAC---AATAA---GT
i Inia_geoffrensis.IniGeo_flattened_line_34779           I 6 C 0
s Jaculus_jaculus.JH725527.1                               8278590  2 -   9596543 TG--------------
i Jaculus_jaculus.JH725527.1                             I 6 I 8
s Kogia_breviceps.KogBre_flattened_line_81059                  257 10 -     18011 TAC---ATCAA---GT
i Kogia_breviceps.KogBre_flattened_line_81059            I 6 C 0
s Lagothrix_lagothricha.k141_1005387                         15947 10 -     38430 TGC---ATGAA---GT
i Lagothrix_lagothricha.k141_1005387                     I 4 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    18228 10 -     42476 TGC---ACCAA---CT
i Lasiurus_borealis.LasBor_scaffold_32767                I 6 C 0
s Lepus_americanus.LepAme_scaffold_107385                     8424  1 -     14121 -G--------------
i Lepus_americanus.LepAme_scaffold_107385                I 5 I 1
s Lipotes_vexillifer.KE559953.1                             269319 10 -    662738 TAC---ATCAA---GT
i Lipotes_vexillifer.KE559953.1                          I 6 C 0
s Lophocebus_aterrimus.ctg367                              1440639 10 +   1826925 AGT---ATCAA---GT
i Lophocebus_aterrimus.ctg367                            I 4 C 0
s Lycaon_pictus.CM007581.1                                17957023 10 -  59628241 CAC---ACCAA---GC
i Lycaon_pictus.CM007581.1                               I 6 C 0
s Macaca_arctoides.k141_2326796                              10449 10 +     40492 AGT---ATCAA---GT
i Macaca_arctoides.k141_2326796                          I 4 C 0
s Macaca_assamensis.Contig5                               59679703 10 +  60120075 AGT---ATCAA---GT
i Macaca_assamensis.Contig5                              I 4 C 0
s Macaca_cyclopis.k119_18836                                 16220 10 -     26193 AGT---ATCAA---GT
i Macaca_cyclopis.k119_18836                             I 4 C 0
s Macaca_fascicularis.k141_814140                            83996 10 -    114318 AGT---ATCAA---GT
i Macaca_fascicularis.k141_814140                        I 4 C 0
s Macaca_fuscata.k119_255327                                  9687 10 -     23192 AGT---ATCAA---GT
i Macaca_fuscata.k119_255327                             I 4 C 0
s Macaca_leonina.k141_3550399                                19151 10 -     29190 AGT---ATCAA---GT
i Macaca_leonina.k141_3550399                            I 4 C 0
s Macaca_maura.k141_2733130                                  27729 10 +     37952 AGT---ATCAA---GT
i Macaca_maura.k141_2733130                              I 4 C 0
s Macaca_mulatta.NC_041758.1                             186842806 10 + 187317192 AGT---ATCAA---gt
i Macaca_mulatta.NC_041758.1                             I 4 C 0
s Macaca_nemestrina.KQ007038.1                            25461384 10 -  25927173 AGT---ATCAA---gt
i Macaca_nemestrina.KQ007038.1                           I 4 C 0
s Macaca_nigra.k141_1655396                                  83585 10 +     89720 AGT---ATCAA---GT
i Macaca_nigra.k141_1655396                              I 4 C 0
s Macaca_radiata.k141_3680011                                10578 10 +     20474 AGT---ATCAA---GT
i Macaca_radiata.k141_3680011                            I 4 C 0
s Macaca_siberu.k141_635500                                  10375 10 -     14993 AGT---ATCAA---GT
i Macaca_siberu.k141_635500                              I 4 C 0
s Macaca_silenus.Contig273                                  333237 10 -    668171 AGT---ATCAA---GT
i Macaca_silenus.Contig273                               I 4 C 0
s Macaca_thibetana.k99_256239                                 8687 10 -     24072 AGT---ATCAA---GT
i Macaca_thibetana.k99_256239                            I 4 C 0
s Macaca_tonkeana.k141_1498238                               29318 10 -     45290 AGT---ATCAA---GT
i Macaca_tonkeana.k141_1498238                           I 4 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92253 10 +     94391 CAT---GCCAA---GT
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 7 C 0
s Mandrillus_leucophaeus.scaffold280                      23940906 10 -  24302211 AGT---ATCAA---GT
i Mandrillus_leucophaeus.scaffold280                     I 4 C 0
s Mandrillus_sphinx.Contig270                               355022 10 +    752769 AGT---ATTAA---GT
i Mandrillus_sphinx.Contig270                            I 4 C 0
s Manis_javanica.JSZB01003497.1                              19734  8 +    737560 ------acc--acaag
i Manis_javanica.JSZB01003497.1                          I 129 C 0
s Manis_pentadactyla.KN006162.1                              51752  8 -    317179 ------acc--tcaag
i Manis_pentadactyla.KN006162.1                          I 129 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        14739  7 -    207569 ------ACCAA---CT
i Megaderma_lyra.MegLyr_scaffold_4542                    I 11 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 34771  1 +    140813 ---------------T
i Meriones_unguiculatus.MerUng_scaffold_7390             I 6 I 7
s Mesocricetus_auratus.KB708134.1                         12184229  1 -  29670104 ---------------T
i Mesocricetus_auratus.KB708134.1                        I 7 I 7
s Marmota_marmota.CZRN01000018.1                          33104787  2 -  40650429 TG--------------
i Marmota_marmota.CZRN01000018.1                         I 6 I 1
s Mesoplodon_bidens.MesBid_scaffold_108144                    4939 13 +     10310 TACTTGATCAA---GT
i Mesoplodon_bidens.MesBid_scaffold_108144               I 6 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                17616 10 -     19307 TAC---ACCAA---GT
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 6 C 0
s Microtus_ochrogaster.CM001695.1                         11262504  2 -  27267610 TA--------------
i Microtus_ochrogaster.CM001695.1                        I 5 I 8
s Miniopterus_natalensis.LDJU01000034.1                    1851813 10 +   8254450 TAC---ACCAA---GT
i Miniopterus_natalensis.LDJU01000034.1                  I 6 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             35497 10 +     64694 TAC---ACCAA---GT
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 6 C 0
s Miopithecus_ogouensis.k141_534055                          12586 10 -     28506 AGT---ATCAA---GT
i Miopithecus_ogouensis.k141_534055                      I 4 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    28434 10 -    437263 TAC---ATCAA---GC
i Monodon_monoceros.MonMon_M_scaffold_103                I 6 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 143208 10 -    366855 TAC---ACCAA---GT
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 6 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   2731 10 +     82753 TAC---ATCAA---GT
i Moschus_moschiferus.MosMos_scaffold_13123              I 6 C 0
s Murina_feae.MurFea_scaffold_85699                           8547 10 +     14753 TAC---ACCAA---GT
i Murina_feae.MurFea_scaffold_85699                      I 6 C 0
s Mus_caroli.LT608237.1                                   84363158  1 - 120012414 ---------------T
i Mus_caroli.LT608237.1                                  I 6 I 7
s Mus_musculus.chr8                                       87652659  1 - 129401213 ---------------T
i Mus_musculus.chr8                                      I 6 I 7
s Mus_pahari.LT608297.1                                   31357393  1 -  89631738 ---------------T
i Mus_pahari.LT608297.1                                  I 6 I 7
s Mus_spretus.CM004101.1                                  90755148  1 - 130317789 ---------------T
i Mus_spretus.CM004101.1                                 I 6 I 7
s Myocastor_coypus.MyoCoy_scaffold_10123                     72948  2 -     80779 TG--------------
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 4 I 8
s Myotis_brandtii.KE162005.1                                282288 10 -  10118263 TAC---ACCAA---GT
i Myotis_brandtii.KE162005.1                             I 6 C 0
s Myotis_davidii.KB100139.1                                1589600 10 -   6019432 TAC---ACCAA---GT
i Myotis_davidii.KB100139.1                              I 6 C 0
s Myotis_lucifugus.GL429869.1                              3905720 10 -   4330536 TAC---ACCAA---GT
i Myotis_lucifugus.GL429869.1                            I 6 C 0
s Myotis_myotis.MyoMyo_scaffold_1392844                        119 10 +       242 TAC---ACCAA---GT
i Myotis_myotis.MyoMyo_scaffold_1392844                  I 18 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190536  8 +    196477 --C---ACCTA---GT
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2036950  1 -   3037898 ---------------T
i Nannospalax_galili.KL204047.1                          I 8 I 7
s Nasalis_larvatus.k141_413338                               18636 10 +     21681 AGT---ATCAA---GT
i Nasalis_larvatus.k141_413338                           I 4 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5867398 10 +   7148211 TAC---ATCAA---GT
i Neophocaena_asiaeorientalis.KZ687982.1                 I 6 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    759395 10 +    783361 TAC---ACAAA---GT
i Noctilio_leporinus.NocLep_scaffold_251                 I 6 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150960 10 -   9404916 CAC---ACCAA---GC
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 6 C 0
s Ochotona_princeps.JH802162.1                             1365825  1 +   3988456 ---------------T
i Ochotona_princeps.JH802162.1                           I 6 C 0
s Odocoileus_virginianus.KZ100018.1                         146235 10 +    630418 Tac---atcaa---at
i Odocoileus_virginianus.KZ100018.1                      I 6 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          78591 10 -    150152 TAC---ATCAA---GT
i Okapia_johnstoni.LVCL01S0005463.1                      I 6 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    82175  1 +    102263 ---------------T
i Onychomys_torridus.OnyTor_scaffold_2986                I 7 I 7
s Ondatra_zibethicus.OndZib_scaffold_46174                   27164  2 +     28053 TA--------------
i Ondatra_zibethicus.OndZib_scaffold_46174               I 5 I 8
s Orcinus_orca.KB316932.1                                  2783299 10 -  10937097 TAC---ATCAA---GT
i Orcinus_orca.KB316932.1                                I 6 C 0
s Oryctolagus_cuniculus.CM000791.1                        67149662  1 + 174332312 -G--------------
i Oryctolagus_cuniculus.CM000791.1                       I 5 I 1
s Otocyon_megalotis.JAEUCK010005147.1                       464050 10 -    559221 CAC---ACCAA---GC
i Otocyon_megalotis.JAEUCK010005147.1                    I 6 C 0
s Ovis_aries.CM001607.2                                   17587856 10 +  44047080 TGC---ACCAA---GT
i Ovis_aries.CM001607.2                                  I 6 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      175848 10 -    191736 TGC---ACCAA---GT
i Ovis_canadensis.OviCan_scaffold_2572                   I 6 C 0
s Pan_paniscus.KQ411613.1                                    47633 10 +     80009 AGT---ATGAA---GT
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146495 10 + 189151597 AGT---ATGAA---GT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152663 10 +    230217 TAC---ACCAA---GT
i Panthera_onca.PanOnc_flattened_line_3271               I 6 C 0
s Panthera_pardus.KV860321.1                                265974 10 +  18783137 tac---ACCAA---GT
i Panthera_pardus.KV860321.1                             I 6 C 0
s Panthera_tigris.KE722367.1                               4722800 10 -   8748460 tac---ACCAA---GT
i Panthera_tigris.KE722367.1                             I 6 C 0
s Pantholops_hodgsonii.KE114653.1                          1266757 10 -   2937107 TAC---ACCAA---Gt
i Pantholops_hodgsonii.KE114653.1                        I 6 C 0
s Papio_anubis.CM001495.2                                183446712 10 + 183742232 AGT---ATCAA---gt
i Papio_anubis.CM001495.2                                I 4 C 0
s Papio_cynocephalus.k141_4307930                            10362 10 +     20448 AGT---ATCAA---GT
i Papio_cynocephalus.k141_4307930                        I 4 C 0
s Papio_hamadryas.Contig39                                20567170 10 +  20919399 AGT---ATCAA---GT
i Papio_hamadryas.Contig39                               I 4 C 0
s Papio_kindae.k141_1936966                                   9102 10 +     41871 AGT---ATCAA---GT
i Papio_kindae.k141_1936966                              I 4 C 0
s Papio_papio.k141_802527                                    12395 10 +     27711 AGT---ATCAA---GT
i Papio_papio.k141_802527                                I 4 C 0
s Papio_ursinus.k141_5274964                                  3394 10 -     11374 AGT---ATCAA---GT
i Papio_ursinus.k141_5274964                             I 4 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14122 10 -     78924 CAT---ACTAA---GC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 7 C 0
s Peromyscus_maniculatus.KI615324.1                       18196810  1 -  18517816 ---------------T
i Peromyscus_maniculatus.KI615324.1                      I 7 I 7
s Petromus_typicus.PetTyp_scaffold_221660                      138  2 -      2102 TG--------------
i Petromus_typicus.PetTyp_scaffold_221660                I 6 I 8
s Phocoena_phocoena.PhoPho_flattened_line_24159              10355 10 +     63832 TAC---ATCAA---GT
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 6 C 0
s Piliocolobus_badius.k141_1142974                            1713 10 +     68526 AGT---ATCAA---GT
i Piliocolobus_badius.k141_1142974                       I 4 C 0
s Piliocolobus_gordonorum.k141_381342                        41859 10 +     89929 AGT---ATCAA---GT
i Piliocolobus_gordonorum.k141_381342                    I 4 C 0
s Piliocolobus_kirkii.k141_448987                            43273 10 +     51399 AGT---ATCAA---GT
i Piliocolobus_kirkii.k141_448987                        I 4 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299510 10 -  14605196 AGT---ATCAA---Gt
i Piliocolobus_tephrosceles.PDMG02000141.1               I 4 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3352 10 +     22620 TAC---ACCAA---GT
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 6 C 0
s Pithecia_albicans.k141_1476471                              5157 10 +     26961 TGC---TTGAA---GT
i Pithecia_albicans.k141_1476471                         I 4 C 0
s Pithecia_chrysocephala.k141_839575                          1302 10 +     23417 TGC---TTGAA---GT
i Pithecia_chrysocephala.k141_839575                     I 4 C 0
s Pithecia_hirsuta.k141_305604                                5149 10 +     29694 TGC---TTGAA---GT
i Pithecia_hirsuta.k141_305604                           I 4 C 0
s Pithecia_mittermeieri.k141_446740                          30175 10 +     52772 TGC---TTGAA---GT
i Pithecia_mittermeieri.k141_446740                      I 4 C 0
s Pithecia_pissinattii.k141_1824269                           5171 10 +     26198 TGC---TTGAA---GT
i Pithecia_pissinattii.k141_1824269                      I 4 C 0
s Pithecia_pithecia.tarseq_165                             3941719 10 +   4542175 TGC---TTGAA---GT
i Pithecia_pithecia.tarseq_165                           I 4 C 0
s Pithecia_vanzolinii.k141_1697688                            5135 10 -     23490 TGC---TTGAA---GT
i Pithecia_vanzolinii.k141_1697688                       I 4 C 0
s Plecturocebus_bernhardi.k141_2549090                        9392 10 -     39866 TGC---TTGAA---GT
i Plecturocebus_bernhardi.k141_2549090                   I 4 C 0
s Plecturocebus_brunneus.k141_1495506                        18558 10 +     34906 TGC---TTGAA---GT
i Plecturocebus_brunneus.k141_1495506                    I 4 C 0
s Plecturocebus_caligatus.k141_1382851                       22820 10 +     87950 TGC---TTGAA---GT
i Plecturocebus_caligatus.k141_1382851                   I 4 C 0
s Plecturocebus_cinerascens.k141_1164729                     23649 10 +     88961 TGC---TTGAA---GT
i Plecturocebus_cinerascens.k141_1164729                 I 4 C 0
s Plecturocebus_cupreus.k141_2351393                          9320 10 +     39403 TGC---TTGAA---GT
i Plecturocebus_cupreus.k141_2351393                     I 4 C 0
s Plecturocebus_dubius.k141_1058799                          23101 10 -     87928 TGC---TTGAA---GT
i Plecturocebus_dubius.k141_1058799                      I 4 C 0
s Plecturocebus_grovesi.k141_2013005                         30060 10 +     60166 TGC---TTGAA---GT
i Plecturocebus_grovesi.k141_2013005                     I 4 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30257 10 +     67232 TGC---TTGAA---GT
i Plecturocebus_hoffmannsi.k141_3303950                  I 4 C 0
s Plecturocebus_miltoni.k141_349282                          25730 10 +     90634 TGC---TTGAA---GT
i Plecturocebus_miltoni.k141_349282                      I 4 C 0
s Plecturocebus_moloch.k141_1031110                          23102 10 -     89403 TGC---TTGAA---GT
i Plecturocebus_moloch.k141_1031110                      I 4 C 0
s Pongo_abelii.CM009266.2                                189134640 10 + 189387572 AGT---ATCAA---gt
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9574249 10 +   9816681 AGT---ATCAA---GT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76813 10 -     81375 AGT---ATCAA---GT
i Presbytis_comata.k141_677006                           I 4 C 0
s Presbytis_mitrata.k141_1087752                              8630 10 +     19060 AGT---ATCAA---GT
i Presbytis_mitrata.k141_1087752                         I 4 C 0
s Psammomys_obesus.NESX01036370.1                            12412  1 -     21651 ---------------T
i Psammomys_obesus.NESX01036370.1                        I 6 I 7
s Pteronotus_parnellii.KE909381.1                            16688 10 -     21811 TAC---ACCAA---GT
i Pteronotus_parnellii.KE909381.1                        I 6 C 0
s Pteropus_alecto.KB030862.1                              22978333 10 +  28871421 CAT---GCCAA---GT
i Pteropus_alecto.KB030862.1                             I 8 C 0
s Puma_concolor.QAVW01001104.1                            20275859 10 -  38429054 tac---ATCAA---GT
i Puma_concolor.QAVW01001104.1                           I 6 C 0
s Pygathrix_cinerea.k141_1153803                             18622 10 -     91421 AGT---ATCAA---GT
i Pygathrix_cinerea.k141_1153803                         I 4 C 0
s Pygathrix_nigripes_b.ctg100                                 7612745 10 +   7812017 AGT---ATCAA---GT
i Pygathrix_nigripes_b.ctg100                               I 4 C 0
s Pygathrix_nigripes_a.k141_215492                             18652 10 -     72585 AGT---ATCAA---GT
i Pygathrix_nigripes_a.k141_215492                         I 4 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  8066 10 +     55207 TAC---ATCAA---GT
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 6 C 0
s Rattus_norvegicus.chr16                                 53572659  1 +  90668790 ---------------T
i Rattus_norvegicus.chr16                                I 6 I 7
s Rhinolophus_sinicus.LVEH01000134.1                        368378 10 -   3329780 TAT---ACCAA---GC
i Rhinolophus_sinicus.LVEH01000134.1                     I 8 C 0
s Rhinopithecus_bieti.k119_217274                            10320 10 -     11128 AGT---ATCAA---GT
i Rhinopithecus_bieti.k119_217274                        I 4 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239688 10 - 195417433 AGT---ATCAA---gt
i Rhinopithecus_roxellana.NC_044550.1                    I 4 C 0
s Rhinopithecus_strykeri.ctg102                            7675335 10 +   7961872 AGT---ATCAA---GT
i Rhinopithecus_strykeri.ctg102                          I 4 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89405 10 -     96226 TAT---GCCAA---GT
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 8 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154676 10 -    313613 TAT---ACCAA---GT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 6 C 0
s Semnopithecus_entellus.k141_1672505                         3494 10 -     12572 AGT---ATCCA---GT
i Semnopithecus_entellus.k141_1672505                    I 4 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30346 10 +     39453 AGT---ATCCA---GT
i Semnopithecus_hypoleucos.k141_1615806                  I 4 C 0
s Semnopithecus_johnii.k141_670120                           10854 10 +     27826 AGT---ATCCA---GT
i Semnopithecus_johnii.k141_670120                       I 4 C 0
s Semnopithecus_priam.k141_638794                            10395 10 -     19483 AGT---ATCCA---GT
i Semnopithecus_priam.k141_638794                        I 4 C 0
s Semnopithecus_schistaceus.k141_1572284                      3693 10 -     12762 AGT---ATCCA---GT
i Semnopithecus_schistaceus.k141_1572284                 I 4 C 0
s Semnopithecus_vetulus.k141_910252                           3538 10 +     13763 AGT---ATCCA---GT
i Semnopithecus_vetulus.k141_910252                      I 4 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     2309  1 -     30804 ---------------T
i Sigmodon_hispidus.SigHis_scaffold_42075                I 7 I 7
s Sorex_araneus.JH798187.1                                13652508 10 -  18376816 TAT---ACAAA---GT
i Sorex_araneus.JH798187.1                               I 6 C 0
s Spermophilus_dauricus.KZ294078.1                         1955656  2 -   3870691 TG--------------
i Spermophilus_dauricus.KZ294078.1                       I 6 I 1
s Suricata_suricatta.SurSur_flattened_line_6629              19827 10 -    196729 CAT---ACCAA---GT
i Suricata_suricatta.SurSur_flattened_line_6629          I 7 C 0
s Sus_scrofa.CM000828.4                                    6813200 10 +  69701581 CCC---ATCGA---GT
i Sus_scrofa.CM000828.4                                  I 7 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                12732 10 +     41958 TAC---ACCAA---GT
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 6 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73921  8 +    116680 --C---ACCTA---GG
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tarsius_lariang.k141_2201908                               27297 10 +     70052 TTC---ACCAA---GT
i Tarsius_lariang.k141_2201908                           I 4 C 0
s Tarsius_wallacei.k141_254427                                2094 10 -     16117 TTC---ACCAA---GT
i Tarsius_wallacei.k141_254427                           I 4 C 0
s Theropithecus_gelada.CM009954.1                        186432018 10 + 186847797 AGT---ATCAA---gt
i Theropithecus_gelada.CM009954.1                        I 4 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106921  2 +    114563 TG--------------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 6 I 8
s Tolypeutes_matacus.TolMat_scaffold_228639                   7643  8 +      8208 --C---ACCAA---GT
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     82961 10 +    610378 TAC---ACCGA---GT
i Tonatia_saurophila.TonSau_scaffold_294                 I 6 C 0
s Trachypithecus_auratus.k141_722599                         14432 10 -     20410 AGT---ATCCA---GT
i Trachypithecus_auratus.k141_722599                     I 4 C 0
s Trachypithecus_crepusculus.k141_582567                      3555 10 -     12674 AGT---ATCCA---GT
i Trachypithecus_crepusculus.k141_582567                 I 4 C 0
s Trachypithecus_cristatus.k141_580354                       14540 10 +     19930 AGT---ATCCA---GT
i Trachypithecus_cristatus.k141_580354                   I 4 C 0
s Trachypithecus_francoisi.k141_1412647                      10942 10 -     19997 AGT---ATCCA---GT
i Trachypithecus_francoisi.k141_1412647                  I 4 C 0
s Trachypithecus_geei.k141_277701                            51084 10 -     60166 AGT---ATCCA---GT
i Trachypithecus_geei.k141_277701                        I 4 C 0
s Trachypithecus_germaini.k141_912491                        18546 10 -     27529 AGT---ATCCA---GT
i Trachypithecus_germaini.k141_912491                    I 4 C 0
s Trachypithecus_hatinhensis.k141_17719                        178 10 +      9229 AGT---ATCCA---GT
i Trachypithecus_hatinhensis.k141_17719                  I 4 C 0
s Trachypithecus_laotum.k141_907409                          12080 10 -     21137 AGT---ATCCA---GT
i Trachypithecus_laotum.k141_907409                      I 4 C 0
s Trachypithecus_leucocephalus.k141_101510                     180 10 +      9131 AGT---ATCCA---GT
i Trachypithecus_leucocephalus.k141_101510               I 4 C 0
s Trachypithecus_melamera.k141_105182                          144 10 -      3730 AGT---ATCCA---GT
i Trachypithecus_melamera.k141_105182                    I 4 C 0
s Trachypithecus_obscurus.k141_190785                        28412 10 +     32220 AGT---ATCCA---GT
i Trachypithecus_obscurus.k141_190785                    I 4 C 0
s Trachypithecus_phayrei.ctg124                            5942509 10 +   6242583 AGT---ATCCA---GT
i Trachypithecus_phayrei.ctg124                          I 4 C 0
s Trachypithecus_pileatus.k141_2007326                       11762 10 +     20839 AGT---ATCCA---GT
i Trachypithecus_pileatus.k141_2007326                   I 4 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    1984 10 +     27266 TAC---ATCAG---GT
i Tragulus_javanicus.TraJav_scaffold_40725               I 6 C 0
s Tupaia_chinensis.KB320699.1                              2157654 10 +   4065304 TGC---atcaa---at
i Tupaia_chinensis.KB320699.1                            I 6 C 0
s Tupaia_tana.TupTan_flattened_line_306982                      76 10 -      4186 TGC---ATCAA---AT
i Tupaia_tana.TupTan_flattened_line_306982               I 6 C 0
s Tursiops_truncatus.MRVK01000835.1                       15739537 10 +  33153633 TAC---ATCAA---GT
i Tursiops_truncatus.MRVK01000835.1                      I 6 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54793 10 -     77625 TAT---ACGAT---TA
i Uropsilus_gracilis.UroGra_scaffold_12083               I 6 C 0
s Vicugna_pacos.KN270157.1                                 5373490 10 -   5488506 tac---atcaa---at
i Vicugna_pacos.KN270157.1                               I 6 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 12488 10 -     43706 CAC---ACCAA---GC
i Vulpes_lagopus.VulLag_flattened_line_30954             I 6 C 0
s Xerus_inauris.XerIna_scaffold_2302                          2648  2 +    224448 TG--------------
i Xerus_inauris.XerIna_scaffold_2302                     I 5 I 1
s Zapus_hudsonius.ZapHud_scaffold_11398                      16327  2 +     63895 TG--------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 6 I 7
s Ziphius_cavirostris.ZipCav_flattened_line_761354              94 13 -      1267 TACTTGATCAA---GT
i Ziphius_cavirostris.ZipCav_flattened_line_761354       I 6 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Castor_canadensis.CasCan_scaffold_2074                    138735 10 +    179628 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T

a score=0.000000
s hg38.chrUn_KI270753v1                                      10297  6 +     62944 AC-------AAGT
s Acinonyx_jubatus.LLWD01001279.1                           828855  6 -   1699592 GC-------AAGT
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     72771  6 +     87051 AC-------ATGC
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 8 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     75867  6 -     89534 AC-------ATGT
i Allactaga_bullata.AllBul_scaffold_9566                 I 8 C 0
s Allenopithecus_nigroviridis.k141_3361533                   18148  6 -     52922 GC-------AAGT
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         18085  6 -     28001 GC-------AAGT
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8580  6 -     18505 GC-------AAGT
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9433  6 -     12518 GC-------AAGT
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              9890  6 +     51355 AC-------AAGT
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                2997  6 -     36483 AC-------AAGT
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13450  6 +     28687 AC-------AAGT
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 1922  6 +     27940 AC-------AAGT
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            3001  6 -      9457 AC-------AAGT
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             1959  6 +     30492 AC-------AAGT
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              5952  6 +     47717 AC-------AAGT
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              2689  6 +      5663 AC-------AAGT
i Alouatta_puruensis.k141_362188                         C 0 I 1
s Alouatta_seniculus.k141_117119                             17141  6 +     50774 AC-------AAGT
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          677582  6 -   2318259 AC-------ATTT
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      187128  6 +    412891 AC-------AAGT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469            100057  6 -    100397 AC-------ATTT
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      14180 13 +     20879 GCCTTGTACAAGT
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 1 I 2
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6536  6 +     43469 AC-------AAGT
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21210153  6 -  21539123 AC-------AAGT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               44949  6 -     48001 AC-------AAGT
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 27753  6 -     30947 AC-------AAGT
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9525  6 -     89868 AC-------AAGT
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              13909  6 -     40414 AC-------AAGT
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                21798  6 +     72325 AC-------AAGT
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193430  6 +  23207421 AC-------TTTT
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         3895  6 -     18090 AC-------TTTT
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    28667  6 +     34529 AC-------ATTT
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    202669  6 -    288883 AC-------ATTT
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20275909  6 +  48749331 AC-------ATTT
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1128462  6 -   1948126 AC-------ATTT
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18086547  6 +  45695690 AC-------ATTT
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2822507  6 +   4408762 AC-------ATTT
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                102775  6 -    122966 AC-------AAGT
i Cacajao_ayresi.k141_552049                             C 0 I 1
s Cacajao_calvus.k141_5142                                   62278  6 +     81800 AC-------AAGT
i Cacajao_calvus.k141_5142                               C 0 I 1
s Cacajao_hosomi.k141_81245                                  31460  6 -     95584 AC-------AAGT
i Cacajao_hosomi.k141_81245                              C 0 I 1
s Cacajao_melanocephalus.k141_619699                         55561  6 -    119600 AC-------AAGT
i Cacajao_melanocephalus.k141_619699                     C 0 I 1
s Camelus_bactrianus.KN276810.1                           10003979  6 -  17673402 ac-------attt
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2336451  6 -   7040546 ac-------attt
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  404749  6 -   1652518 ac-------attt
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17800879  6 -  60362399 AC-------AAGT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     1622  6 -     43241 AC-------AAGT
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9036322  6 -   9314153 AC-------AAGT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17960793  6 -  59632846 AC-------AAGT
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18502095  6 +  63665305 AC-------AAGT
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18831688  6 +  46296322 AC-------ATTT
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18062408  6 -  44709034 AC-------ATTT
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    2768  6 -     12242 AC-------AAGA
i Capromys_pilorides.CapPil_scaffold_65020               I 8 C 0
s Carlito_syrichta.NW_007259797.1                           156813  6 -    496798 ac-------aagt
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6879  6 -     11696 AC-------AAGT
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138745  2 +    179628 -----------GT
i Castor_canadensis.CasCan_scaffold_2074                 I 10 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     95627  6 +    217609 AT-------ATTT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18350966  6 -  23392119 AC-------Aaga
i Cavia_aperea.AVPZ01000300.1                            I 8 C 0
s Cavia_porcellus.DS562891.1                              18363229  6 -  23407841 AC-------aaga
i Cavia_porcellus.DS562891.1                             I 8 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                       102111  6 +    143979 AC-------AAGA
i Cavia_tschudii.CavTsc_scaffold_8919                    I 8 C 0
s Cephalopachus_bancanus.k141_1423433                         6312  6 +     31688 AC-------AAGT
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4479107  6 +   4669795 gc-------aagt
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3601  6 +     17872 GC-------AAGT
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4196  6 -     14043 GC-------AAGT
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12291  6 +     27781 GC-------AAGT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12445  6 -     20310 GC-------AAGT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15421  6 +     29689 GC-------AAGT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10181  6 -     20078 GC-------AAGT
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          18096  6 -     27936 GC-------AAGT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            6967  6 -     17152 GC-------AAGT
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826691  6 +  39242232 GC-------AAGT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226199  6 -  21565898 GC-------AAGT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43318  6 -     53127 GC-------AAGT
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3568  6 +     13442 GC-------AAGT
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       18114  6 -     27947 GC-------AAGT
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1143  6 +     10558 GC-------AAGT
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4148  6 +     14005 GC-------AAGT
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1758  6 -      8501 AC-------AGGT
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheracebus_lucifer.k141_49986                               1379  6 -     17098 AC-------AAGT
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1255  6 +     17877 AC-------AAGT
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            158822  6 -    216457 AC-------AAGT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63297  6 +     76511 AC-------AAGT
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254413  6 +   2543920 AG-------AAGA
i Chinchilla_lanigera.JH722012.1                         I 8 C 0
s Chiropotes_israelita.k141_747660                           99904  6 +    146308 AC-------AAGT
i Chiropotes_israelita.k141_747660                       C 0 I 1
s Chiropotes_sagulatus.k141_1421488                          31711  6 -     50570 AC-------AAGT
i Chiropotes_sagulatus.k141_1421488                      C 0 I 1
s Chlorocebus_aethiops.ctg25                              18432018  6 -  18827391 GC-------AAGT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18515  6 -     50209 GC-------AAGT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425519  6 + 135778131 gc-------aagt
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1914020  6 +   2368649 gc-------aagt
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952268  6 + 200372422 GC-------AAGT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40541  6 +     84244 GC-------AAGT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549544  6 -  53390261 AA-------ACat
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1894  6 +     23735 AT-------ATGT
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 52027  6 +     63868 AC-------GTGC
i Cricetomys_gambianus.CriGam_scaffold_18520             I 7 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               4292  6 -     19598 GC-------AAGT
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             30036  6 -     87169 GC-------AAGT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37694  6 +     51376 AC-------AAGA
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 8 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900             1388  6 -     75252 AC-------AAGA
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 8 C 0
s Dasypus_novemcinctus.JH564415.1                            64777  6 +   2246927 GC-------AGGT
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16813061  6 +  35494412 AC-------ATTT
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8631880  6 +  20541912 AC-------AAGT
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37899  6 +     67921 AG-------AAGA
i Dinomys_branickii.DinBra_scaffold_21862                I 8 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 35028  6 -     42551 AC-------GAGA
i Dolichotis_patagonum.DolPat_scaffold_30833             I 8 C 0
s Eidolon_helvum.AWHC01278734.1                                 94  6 +      2334 AC-------AAGT
i Eidolon_helvum.AWHC01278734.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       313455  6 +    607251 AC-------ATTT
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          22533  6 -    110024 AG-------CAGC
i Ellobius_lutescens.LOEQ01008920.1                      I 8 I 1
s Ellobius_talpinus.LOJH01081419.1                            2453  6 +      8657 AG-------CAGC
i Ellobius_talpinus.LOJH01081419.1                       I 8 I 1
s Eptesicus_fuscus.JH977646.1                              2148593  6 -  14770903 AC-------CAGT
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Erythrocebus_patas.Contig38                             21208691  6 -  21539334 GC-------AAGT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12743  6 +    133382 AC-------TTTT
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             26689  6 -     44125 AC-------TTTT
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20238599  6 + 206538554 GC-------AAGT
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20197474  6 + 205367284 GC-------AAGT
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 11134  6 -     36744 GC-------AAGT
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             852080  6 +   3816255 AC-------AAGA
i Fukomys_damarensis.KN121974.1                          I 8 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               3868  6 -      9135 AC-------AAGT
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     610700  6 -    660261 AC-------ATTT
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            32830 13 +     49224 gccatgtgcatgt
i Glis_glis.GliGli_scaffold_19807                        I 410 C 0
s Gorilla_beringei.k141_3596273                              19542  6 -     32273 AC-------AAGT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341678  6 + 186649187 Ac-------aagt
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   34848 13 +     78134 gtgaagtacccat
i Graphiurus_murinus.GraMur_scaffold_10447               I 742 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243844  6 +    327341 GC-------AAGT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 19904  6 +     36099 AC-------ATTT
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20663716  3 +  22651954 ----------AGA
i Heterocephalus_glaber.JH602082.1                       I 5 C 0
s Hipposideros_armiger.JXIK01000431.1                       111934  6 +   1711038 AC-------AAGT
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188                500  6 +      9903 AC-------AAGT
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 C 0
s Hoolock_leuconedys.ctg274                                    438336  6 +    630532 AC-------AAGT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46584  6 +     55795 GC-------AAGT
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23363  6 -    143317 AT-------AAGA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 8 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84612  6 +    135385 AC-------AAGA
i Hystrix_cristata.HysCri_scaffold_5660                  I 8 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7522513 13 -   7955117 GCcatgtacaagt
i Ictidomys_tridecemlineatus.JH393364.1                  I 1 I 2
s Inia_geoffrensis.IniGeo_flattened_line_34779                 297  6 -     31341 AC-------ATTT
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8278600  6 -   9596543 GC-------ATGT
i Jaculus_jaculus.JH725527.1                             I 8 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                  267  6 -     18011 AC-------ATTT
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         15957  6 -     38430 AC-------AAGT
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    18238  6 -     42476 GC-------CAGT
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lepus_americanus.LepAme_scaffold_107385                     8426  1 -     14121 A------------
i Lepus_americanus.LepAme_scaffold_107385                I 1 I 743
s Lipotes_vexillifer.KE559953.1                             269329  6 -    662738 AC-------ATTT
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1440649  6 +   1826925 GC-------AAGT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17957033  6 -  59628241 AC-------AAGT
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                              10459  6 +     40492 GC-------AAGT
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679713  6 +  60120075 GC-------AAGT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16230  6 -     26193 GC-------AAGT
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            84006  6 -    114318 GC-------AAGT
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9697  6 -     23192 GC-------AAGT
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19161  6 -     29190 GC-------AAGT
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27739  6 +     37952 GC-------AAGT
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842816  6 + 187317192 gc-------aagt
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461394  6 -  25927173 gc-------aagt
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83595  6 +     89720 GC-------AAGT
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10588  6 +     20474 GC-------AAGT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10385  6 -     14993 GC-------AAGT
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333247  6 -    668171 GC-------AAGT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8697  6 -     24072 GC-------AAGT
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29328  6 -     45290 GC-------AAGT
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92263  6 +     94391 AC-------AAGT
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23940916  6 -  24302211 GC-------AAGT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355032  6 +    752769 GC-------AAGT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              19742  6 +    737560 at-------atct
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              51760  6 -    317179 at-------atct
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33104790 13 -  40650429 ACCATgtacaaat
i Marmota_marmota.CZRN01000018.1                         I 1 I 4
s Megaderma_lyra.MegLyr_scaffold_4542                        14746  6 -    207569 GT-------AAGT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 34779  6 +    140813 AC-------ATGC
i Meriones_unguiculatus.MerUng_scaffold_7390             I 7 C 0
s Mesocricetus_auratus.KB708134.1                         12184237  6 -  29670104 AC-------ACTC
i Mesocricetus_auratus.KB708134.1                        I 7 I 1
s Mesoplodon_bidens.MesBid_scaffold_108144                    4952  6 +     10310 AC-------ATTT
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                17626  6 -     19307 AC-------AAGT
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11262514  6 -  27267610 AG-------CAGC
i Microtus_ochrogaster.CM001695.1                        I 8 I 1
s Miniopterus_natalensis.LDJU01000034.1                    1851823  6 +   8254450 AC-------ACGT
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             35507  6 +     64694 AC-------ACGT
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                          12596  6 -     28506 GC-------AAGT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    28444  6 -    437263 AC-------ATTT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 143218  6 -    366855 AC-------AAGT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   2741  6 +     82753 AC-------GTTT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           8557  6 +     14753 AC-------CAGT
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84363166  6 - 120012414 ac-------acac
i Mus_caroli.LT608237.1                                  I 7 C 0
s Mus_musculus.chr8                                       87652667  6 - 129401213 AC-------ACAC
i Mus_musculus.chr8                                      I 7 C 0
s Mus_pahari.LT608297.1                                   31357401  6 -  89631738 AC-------ACGC
i Mus_pahari.LT608297.1                                  I 7 C 0
s Mus_spretus.CM004101.1                                  90755156  6 - 130317789 AC-------ACAC
i Mus_spretus.CM004101.1                                 I 7 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     72958  6 -     80779 AC-------AAGA
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 8 C 0
s Myotis_brandtii.KE162005.1                                282298  6 -  10118263 AC-------CAGT
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1589610  6 -   6019432 AC-------CAGT
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3905730  6 -   4330536 AC-------CAGT
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_1392844                        129  6 +       242 AC-------CAGT
i Myotis_myotis.MyoMyo_scaffold_1392844                  C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190544  6 +    196477 AC-------AAGT
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2036958  6 -   3037898 GC-------ATGT
i Nannospalax_galili.KL204047.1                          I 7 C 0
s Nasalis_larvatus.k141_413338                               18646  6 +     21681 GC-------AAGT
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5867408  6 +   7148211 AC-------ATTT
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    759405  6 +    783361 AC-------AAGT
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150970  6 -   9404916 AC-------AAGT
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Ochotona_princeps.JH802162.1                             1365826  5 +   3988456 GC-------ACC-
i Ochotona_princeps.JH802162.1                           C 0 I 7
s Odocoileus_virginianus.KZ100018.1                         146245  6 +    630418 ac-------attt
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          78601  6 -    150152 AC-------ATTT
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   27174  6 +     28053 AG-------CAGC
i Ondatra_zibethicus.OndZib_scaffold_46174               I 8 I 1
s Onychomys_torridus.OnyTor_scaffold_2986                    82183  6 +    102263 AC-------ACGC
i Onychomys_torridus.OnyTor_scaffold_2986                I 7 I 479
s Orcinus_orca.KB316932.1                                  2783309  6 -  10937097 AC-------ATTT
i Orcinus_orca.KB316932.1                                C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67149664  1 + 174332312 A------------
i Oryctolagus_cuniculus.CM000791.1                       I 1 I 1414
s Otocyon_megalotis.JAEUCK010005147.1                       464060  6 -    559221 AC-------AAGT
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17587866  6 +  44047080 AC-------ATTT
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      175858  6 -    191736 AC-------ATGT
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    47643  6 +     80009 ac-------aagt
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146505  6 + 189151597 ac-------aagt
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152673  6 +    230217 GC-------AAGT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                265984  6 +  18783137 GC-------AAGT
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4722810  6 -   8748460 GC-------AAGT
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1266767  6 -   2937107 ac-------attt
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183446722  6 + 183742232 gc-------aagt
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10372  6 +     20448 GC-------AAGT
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567180  6 +  20919399 GC-------AAGT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   9112  6 +     41871 GC-------AAGT
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12405  6 +     27711 GC-------AAGT
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3404  6 -     11374 GC-------AAGT
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14132  6 -     78924 AC-------AAGT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18196818  6 -  18517816 AC-------ATGC
i Peromyscus_maniculatus.KI615324.1                      I 7 I 474
s Petromus_typicus.PetTyp_scaffold_221660                      148  6 -      2102 AC-------AAGA
i Petromus_typicus.PetTyp_scaffold_221660                I 8 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              10365  6 +     63832 AC-------ATTT
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            1723  6 +     68526 GC-------AAGT
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        41869  6 +     89929 GC-------AAGT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43283  6 +     51399 GC-------AAGT
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299520  6 -  14605196 gc-------aagt
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3362  6 +     22620 AC-------CAGT
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pithecia_albicans.k141_1476471                              5167  6 +     26961 AC-------AAGT
i Pithecia_albicans.k141_1476471                         C 0 I 1
s Pithecia_chrysocephala.k141_839575                          1312  6 +     23417 AC-------AAGT
i Pithecia_chrysocephala.k141_839575                     C 0 I 1
s Pithecia_hirsuta.k141_305604                                5159  6 +     29694 AC-------AAGT
i Pithecia_hirsuta.k141_305604                           C 0 I 1
s Pithecia_mittermeieri.k141_446740                          30185  6 +     52772 AC-------AAGT
i Pithecia_mittermeieri.k141_446740                      C 0 I 1
s Pithecia_pissinattii.k141_1824269                           5181  6 +     26198 AC-------AAGT
i Pithecia_pissinattii.k141_1824269                      C 0 I 1
s Pithecia_pithecia.tarseq_165                             3941729  6 +   4542175 AC-------AAGT
i Pithecia_pithecia.tarseq_165                           C 0 I 1
s Pithecia_vanzolinii.k141_1697688                            5145  6 -     23490 AC-------AAGT
i Pithecia_vanzolinii.k141_1697688                       C 0 I 1
s Plecturocebus_bernhardi.k141_2549090                        9402  6 -     39866 AC-------AAGT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18568  6 +     34906 AC-------AAGT
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       22830  6 +     87950 AC-------AAGT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23659  6 +     88961 AC-------AAGT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9330  6 +     39403 AC-------AAGT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          23111  6 -     87928 AC-------AAGT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         30070  6 +     60166 AC-------AAGT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30267  6 +     67232 AC-------AAGT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          25740  6 +     90634 AC-------AAGT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          23112  6 -     89403 AC-------AAGT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189134650  6 + 189387572 ac-------aagt
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9574259  6 +   9816681 AC-------AAGT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76823  6 -     81375 GC-------AAGT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8640  6 +     19060 GC-------AAGT
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            12420  6 -     21651 AC-------ATGC
i Psammomys_obesus.NESX01036370.1                        I 7 C 0
s Pteronotus_parnellii.KE909381.1                            16698  6 -     21811 AC-------AAGT
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteropus_alecto.KB030862.1                              22978343  6 +  28871421 AC-------AAGT
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Puma_concolor.QAVW01001104.1                            20275869  6 -  38429054 GC-------AAGT
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             18632  6 -     91421 GC-------AAGT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612755  6 +   7812017 GC-------AAGT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18662  6 -     72585 GC-------AAGT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  8076  6 +     55207 AC-------ATTT
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53572667  6 +  90668790 AC-------ATAC
i Rattus_norvegicus.chr16                                I 7 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        368388  6 -   3329780 AC-------AAGT
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                            10330  6 -     11128 GC-------AAGT
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239698  6 - 195417433 gc-------aagt
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675345  6 +   7961872 GC-------AAGT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89415  6 -     96226 AC-------AAGT
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154686  6 -    313613 AC-------ATGT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                         3504  6 -     12572 GC-------AAGT
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30356  6 +     39453 GC-------AAGT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           10864  6 +     27826 GC-------AAGT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10405  6 -     19483 GC-------AAGT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3703  6 -     12762 GC-------AAGT
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3548  6 +     13763 GC-------AAGT
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     2317  3 -     30804 GC-------A---
i Sigmodon_hispidus.SigHis_scaffold_42075                I 7 I 3
s Sorex_araneus.JH798187.1                                13652518  6 -  18376816 GC-------AAGT
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1955659 13 -   3870691 GCcatgtacaagt
i Spermophilus_dauricus.KZ294078.1                       I 1 I 2
s Suricata_suricatta.SurSur_flattened_line_6629              19837  6 -    196729 GC-------AAGT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6813210  6 +  69701581 AC-------ATTT
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                12742  6 +     41958 CC-------AAGT
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73929  6 +    116680 AC-------AAAT
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tarsius_lariang.k141_2201908                               27307  6 +     70052 AC-------AAGT
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                2104  6 -     16117 AC-------AAGT
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186432028  6 + 186847797 gc-------aagt
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106931  6 +    114563 AC-------AAGA
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 8 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   7651  6 +      8208 AC-------AGGT
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     82971  6 +    610378 AC-------AAGT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         14442  6 -     20410 GC-------AAGT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3565  6 -     12674 GC-------AAGT
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14550  6 +     19930 GC-------AAGT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      10952  6 -     19997 GC-------AAGT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            51094  6 -     60166 GC-------AAGT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18556  6 -     27529 GC-------AAGT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                        188  6 +      9229 GC-------AAGT
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          12090  6 -     21137 GC-------AAGT
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                     190  6 +      9131 GC-------AAGT
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                          154  6 -      3730 GC-------AAGT
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28422  6 +     32220 GC-------AAGT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942519  6 +   6242583 GC-------AAGT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11772  6 +     20839 GC-------AAGT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    1994  6 +     27266 AC-------ATTT
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tupaia_chinensis.KB320699.1                              2157664  6 +   4065304 ac-------atgt
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_306982                      86  6 -      4186 AC-------ATGT
i Tupaia_tana.TupTan_flattened_line_306982               C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15739547  6 +  33153633 AC-------ATTT
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54803  6 -     77625 CA-------ATGT
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Vicugna_pacos.KN270157.1                                 5373500  6 -   5488506 ac-------attt
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 12498  6 -     43706 AC-------AAGT
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          2651 11 +    224448 GCCACCTATAA--
i Xerus_inauris.XerIna_scaffold_2302                     I 1 I 2
s Zapus_hudsonius.ZapHud_scaffold_11398                      16336  6 +     63895 GC-------ATGT
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 7 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_761354             107  6 -      1267 AC-------ATTT
i Ziphius_cavirostris.ZipCav_flattened_line_761354       C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Octodon_degus.JH651603.1                                  747650 1546 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Muscardinus_avellanarius.MusAve_scaffold_82313              5549 814 +     14296 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T

a score=0.000000
s hg38.chrUn_KI270753v1                                      10303 10 +     62944 TTT-TC----A-AAAA
s Acinonyx_jubatus.LLWD01001279.1                           828861 10 -   1699592 TCT-CA----A-AGAA
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     72777 10 +     87051 -TTTAG----A-AGGT
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     75873  9 -     89534 -TT-AG----G-AGAC
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   18154 10 -     52922 TTT-TT----A-AAAA
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         18091 10 -     28001 TTT-TT----A-AAAA
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8586 10 -     18505 TTT-TT----A-AAAA
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9439 10 -     12518 TTT-TT----A-AAAA
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              9896 10 +     51355 TTT-TT----A-AAAA
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                3003 10 -     36483 TTT-TT----A-AAAA
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13456 10 +     28687 TTT-TT----A-AAAA
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 1928 10 +     27940 TTT-TT----A-AAAA
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            3007 10 -      9457 TTT-TT----A-AAAA
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             1965 10 +     30492 TTT-TT----A-AAAA
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              5958 10 +     47717 TTT-TT----A-AAAA
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              2696 10 +      5663 TTT-TT----A-AAAA
i Alouatta_puruensis.k141_362188                         I 1 C 0
s Alouatta_seniculus.k141_117119                             17147 10 +     50774 TTT-TT----A-AAAA
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          677588  9 -   2318259 -TT-CT----C-GAAA
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      187134 10 +    412891 TTT-CA----A-AGAT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469            100063  9 -    100397 -TT-CA----T-GAAA
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      14195  8 +     20879 T----T----AAAGAA
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 2 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6542 10 +     43469 TTT-CA----A-AGAT
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21210159 10 -  21539123 TTT-TT----A-AAAA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               44955 10 -     48001 TTT-TT----A-AAAA
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 27759 10 -     30947 TTT-TT----A-AAAA
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9531 10 -     89868 TTT-TT----A-AAAA
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              13915 10 -     40414 TTT-TT----A-AAAA
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                21804 10 +     72325 TTT-TT----A-AAAA
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193436  9 +  23207421 -TT-CA----T-AGAA
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         3901  9 -     18090 -TT-CA----T-AGAA
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    28673  9 +     34529 -TT-CT----T-GAAA
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    202675  9 -    288883 -TT-CA----T-GAAA
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20275915  9 +  48749331 -TT-CA----T-GAAA
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1128468  9 -   1948126 -TT-CA----T-GAAA
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18086553  9 +  45695690 -TT-CA----T-GAAA
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2822513  9 +   4408762 -TT-CA----T-GAAA
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                102782  9 -    122966 TTG--T----A-AAAA
i Cacajao_ayresi.k141_552049                             I 1 C 0
s Cacajao_calvus.k141_5142                                   62285  9 +     81800 TTG--T----A-AAAA
i Cacajao_calvus.k141_5142                               I 1 C 0
s Cacajao_hosomi.k141_81245                                  31467  9 -     95584 TTG--T----A-AAAA
i Cacajao_hosomi.k141_81245                              I 1 C 0
s Cacajao_melanocephalus.k141_619699                         55568  9 -    119600 TTG--T----A-AAAA
i Cacajao_melanocephalus.k141_619699                     I 1 C 0
s Camelus_bactrianus.KN276810.1                           10003985  9 -  17673402 -tt-ca----t-acaA
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2336457  9 -   7040546 -tt-ca----t-acaA
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  404755  9 -   1652518 -tt-ca----t-acaA
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17800885 10 -  60362399 TTT-CA----A-AGAT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     1628 10 -     43241 TTT-CA----A-AGAT
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9036328 10 -   9314153 TTT-CA----A-AGAT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17960799 10 -  59632846 TTT-CA----A-AGAT
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18502101 10 +  63665305 TTT-CA----A-AGAT
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18831694  9 +  46296322 -TT-CT----T-GAAA
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18062414  9 -  44709034 -TT-CT----T-GAAA
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    2774 10 -     12242 TAT-TA----A-AGAA
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           156819 10 -    496798 ttt-tt----t-aaaa
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6885 10 -     11696 TTT-CC----A-AGAT
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138747 10 +    179628 ATA-TC----A-GGCC
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     95633  9 +    217609 -TT-CA----T-AAAA
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18350972 10 -  23392119 ttt-ta----a-agat
i Cavia_aperea.AVPZ01000300.1                            C 0 I 345
s Cavia_porcellus.DS562891.1                              18363235 10 -  23407841 ttt-ta----a-agat
i Cavia_porcellus.DS562891.1                             C 0 I 345
s Cavia_tschudii.CavTsc_scaffold_8919                       102117 10 +    143979 TTT-TA----A-AGAT
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 I 345
s Cephalopachus_bancanus.k141_1423433                         6318 10 +     31688 TTT-TT----T-AAAA
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4479113 10 +   4669795 ttt-tt----a-aaaa
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3607 10 +     17872 TTT-TT----A-AAAT
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4202 10 -     14043 TTT-TT----A-AAAA
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12297 10 +     27781 TTT-TT----A-AAAA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12451 10 -     20310 TTT-TT----A-GAAA
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15427 10 +     29689 TTT-TT----A-AAAA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10187 10 -     20078 TTT-TT----T-AAAA
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          18102 10 -     27936 TTT-TT----A-AAAA
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            6973 10 -     17152 TTT-TT----A-AAAA
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826697 10 +  39242232 TTT-TT----A-AAAA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226205 10 -  21565898 TTT-TT----A-AAAA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43324 10 -     53127 TTT-AA----A-AAAA
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3574 10 +     13442 TTT-TT----A-AAAA
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       18120 10 -     27947 TTT-TT----A-AAAA
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1149 10 +     10558 TTT-TT----A-AAAA
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4154 10 +     14005 TTT-TT----A-AAAA
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1764 10 -      8501 TGT-TA----A-AGAA
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheracebus_lucifer.k141_49986                               1385 10 -     17098 TTT-TT----A-AAAA
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1261 10 +     17877 TTT-TT----A-AAAA
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            158828 10 -    216457 TTT-TT----A-AAAA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63303 10 +     76511 TTT-TT----A-AAAA
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254419 10 +   2543920 GGT-TA----A-AGAC
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_israelita.k141_747660                           99911 10 +    146308 TTT-TT----A-AAAA
i Chiropotes_israelita.k141_747660                       I 1 C 0
s Chiropotes_sagulatus.k141_1421488                          31718 10 -     50570 TTT-TT----A-AAAA
i Chiropotes_sagulatus.k141_1421488                      I 1 C 0
s Chlorocebus_aethiops.ctg25                              18432024 10 -  18827391 TTT-TA----A-AAAA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18521 10 -     50209 TTT-TT----A-AAAA
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425525 10 + 135778131 ttt-tt----a-aaaa
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1914026 10 +   2368649 ttt-tt----a-aaaa
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952274 10 + 200372422 TTT-TT----A-AAAA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40547 10 +     84244 TTT-TT----A-AAAA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549550 10 -  53390261 cag-ca----a-ataa
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1900 10 +     23735 TTT-CA----A-AGAA
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 52033  9 +     63868 -TT-AG----A-AGAA
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               4298 10 -     19598 TTT-CA----T-TGAA
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_16129             30042 10 -     87169 TCT-CA----A-AGAA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37700 10 +     51376 CCT-TA----A-AGAC
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900             1394 10 -     75252 CTT-TA----A-AAAC
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            64783 10 +   2246927 CGT-TA----A-AGAA
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16813067  9 +  35494412 -TT-CA----T-AGAA
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8631886 10 +  20541912 TTT-CA----A-AGAT
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37905 10 +     67921 CTT-TA----A-AGAC
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 35034 10 -     42551 TTT-TA----A-AGAT
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.AWHC01278734.1                                100  8 +      2334 TCT-CA----A-AG--
i Eidolon_helvum.AWHC01278734.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       313461  9 +    607251 -TT-CA----T-GAAA
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          22540  8 -    110024 --T-AC----C-AGAA
i Ellobius_lutescens.LOEQ01008920.1                      I 1 C 0
s Ellobius_talpinus.LOJH01081419.1                            2460  8 +      8657 --T-AC----C-AGAA
i Ellobius_talpinus.LOJH01081419.1                       I 1 C 0
s Eptesicus_fuscus.JH977646.1                              2148599 10 -  14770903 TTT-CT----A-AGAA
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Erythrocebus_patas.Contig38                             21208697 10 -  21539334 TTT-TT----A-AAAA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12749  9 +    133382 -TT-CA----T-AGAA
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             26695  9 -     44125 -TT-CA----T-AGAA
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20238605 10 + 206538554 TCT-CA----A-AGAA
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20197480 10 + 205367284 TCT-CA----A-AGAA
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 11140 10 -     36744 TCT-CA----A-AGAA
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             852086 10 +   3816255 CTT-TA----A-GGAC
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               3874 10 -      9135 TTT-TA----A-AGAA
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     610706  9 -    660261 -TT-CA----T-GAAA
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            32843 10 +     49224 ttt-tt----a-agat
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              19548 10 -     32273 TTT-TC----A-AAAA
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341684 10 + 186649187 ttt-tc----a-aaaa
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   34861  9 +     78134 ttt-tt----A-A-AT
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243850 10 +    327341 TCT-CA----A-AGAA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 19910  9 +     36099 -TT-CT----T-GAAA
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20663719 10 +  22651954 CTT-TA----A-AGAC
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       111940 10 +   1711038 TTT-CA----A-AGAA
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188                506 10 +      9903 TTT-CA----A-AGAA
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 C 0
s Hoolock_leuconedys.ctg274                                    438342 10 +    630532 TTT-TT----A-AAAA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46590 10 +     55795 TCT-CA----A-AGAA
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23369 10 -    143317 TTT-TA----A-AGAT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84618 10 +    135385 CTT-TA----A-AGAC
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7522528 15 -   7955117 ttt-ttttttaaagaa
i Ictidomys_tridecemlineatus.JH393364.1                  I 2 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                 303  9 -     31341 -TT-CA----C-AGAA
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8278606  9 -   9596543 -TT-AG----A-AGAC
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                  273  9 -     18011 -TT-CA----T-AGAA
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         15963 10 -     38430 TTT-TT----A-AAAA
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    18244 10 -     42476 TTC-CT----A-AGAA
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             269335  9 -    662738 -TT-CA----T-AGAA
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1440655 10 +   1826925 TTT-TT----A-AAAA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17957039 10 -  59628241 TTT-CA----A-AGAT
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                              10465 10 +     40492 TTT-TT----A-AAAA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679719 10 +  60120075 TTT-TT----A-AAAA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16236 10 -     26193 TTT-TT----A-AAAA
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            84012 10 -    114318 TTT-TT----A-AAAA
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9703 10 -     23192 TTT-TT----A-AAAA
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19167 10 -     29190 TTT-TT----A-AAAA
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27745 10 +     37952 TTT-TT----A-AAAA
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842822 10 + 187317192 ttt-tt----a-aaaa
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461400 10 -  25927173 ttt-tt----a-aaaa
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83601 10 +     89720 TTT-TT----A-AAAA
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10594 10 +     20474 TTT-TT----A-AAAA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10391 10 -     14993 TTT-TT----A-AAAA
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333253 10 -    668171 TTT-TT----A-AAAA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8703 10 -     24072 TTT-TT----A-AAAA
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29334 10 -     45290 TTT-TT----A-AAAA
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92269  8 +     94391 TCT-CA----A-AG--
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23940922 10 -  24302211 TTT-TT----A-AAAA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355038 10 +    752769 TTT-TT----A-AAAA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              19748 10 +    737560 aaa-ca----t-aaga
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              51766 10 -    317179 aaa-ca----t-aaga
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33104807 15 -  40650429 ttt-ttttttaaagaa
i Marmota_marmota.CZRN01000018.1                         I 4 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        14752 10 -    207569 TTT-CA----A-AGAT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 34785  9 +    140813 -TT-AG----A-AGTA
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12184244  8 -  29670104 --G-AG----A-AGAA
i Mesocricetus_auratus.KB708134.1                        I 1 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    4958  9 +     10310 -TT-CA----T-AGAA
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                17632 10 -     19307 TTT-CA----A-AGAT
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11262521  8 -  27267610 --T-AC----C-AGAA
i Microtus_ochrogaster.CM001695.1                        I 1 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1851829 10 +   8254450 TTT-CA----A-AGAA
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             35513 10 +     64694 TTT-CA----A-AGAA
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                          12602 10 -     28506 TTT-TT----A-AAAA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    28450  9 -    437263 -TT-CA----T-AGAA
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 143224 10 -    366855 TTT-CA----A-AGAA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   2747  9 +     82753 -TT-CA----T-GAAA
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           8563 10 +     14753 TTT-CT----A-AGAA
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84363172 10 - 120012414 -tt-ta----aaaaat
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87652673  9 - 129401213 -TT-GA----A-AAAA
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31357407  9 -  89631738 -TT-AG----A-AGAA
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90755162  9 - 130317789 -TT-GA----A-AAAA
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              6363 10 +     14296 TTT-TT----A-AGAT
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 814 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     72964 10 -     80779 CAT-TA----A-AGAC
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                282304 10 -  10118263 TTT-CT----A-AGAA
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1589616 10 -   6019432 TTT-CT----A-CGAA
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3905736 10 -   4330536 TTT-CT----A-CGAA
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_1392844                        135 10 +       242 TTT-CT----A-TGAA
i Myotis_myotis.MyoMyo_scaffold_1392844                  C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190550 10 +    196477 TGT-TA----A-AGAT
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2036964  9 -   3037898 -TC-AG----A-AGAA
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               18652 10 +     21681 TTT-TT----A-AAAA
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5867414  9 +   7148211 -TT-CA----T-AGAA
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    759411 10 +    783361 TTT-AA----A-AGAA
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150976 10 -   9404916 TTT-CA----A-AGAT
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Ochotona_princeps.JH802162.1                             1365838  5 +   3988456 ----------A-GGCT
i Ochotona_princeps.JH802162.1                           I 7 C 0
s Octodon_degus.JH651603.1                                  749196  1 +  11899542 ---------------c
i Octodon_degus.JH651603.1                               I 1546 C 0
s Odocoileus_virginianus.KZ100018.1                         146251  9 +    630418 -tt-ca----t-gAAA
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          78607  9 -    150152 -TT-CA----C-GAAA
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   27181  8 +     28053 --T-AC----C-AGAA
i Ondatra_zibethicus.OndZib_scaffold_46174               I 1 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    82668  9 +    102263 -TT-AG----A-AGAA
i Onychomys_torridus.OnyTor_scaffold_2986                I 479 C 0
s Orcinus_orca.KB316932.1                                  2783315  9 -  10937097 -TT-CA----T-AGAA
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       464066 10 -    559221 TTT-CA----A-AGAT
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17587872  9 +  44047080 -TT-CT----T-GAAA
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      175864  9 -    191736 -TT-CT----T-GAAA
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    47649 10 +     80009 ttt-tc----a-aaaa
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146511 10 + 189151597 ttt-tc----a-aaaa
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152679 10 +    230217 TCT-CA----A-AGAA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                265990 10 +  18783137 TCT-CA----A-AGAA
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4722816 10 -   8748460 TCT-CA----A-AGAA
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1266773  9 -   2937107 -tt-tt----t-gaaa
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183446728 10 + 183742232 ttt-tt----a-aaaa
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10378 10 +     20448 TTT-TT----A-AAAA
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567186 10 +  20919399 TTT-TT----A-AAAA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   9118 10 +     41871 TTT-TT----A-AAAA
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12411 10 +     27711 TTT-TT----A-AAAA
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3410 10 -     11374 TTT-TT----A-AAAA
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14138 10 -     78924 TCT-CA----A-AGAC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18197298  9 -  18517816 -TT-AG----A-AGAA
i Peromyscus_maniculatus.KI615324.1                      I 474 C 0
s Petromus_typicus.PetTyp_scaffold_221660                      154 10 -      2102 CTT-TA----A-agac
i Petromus_typicus.PetTyp_scaffold_221660                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              10371  9 +     63832 -TT-CA----T-AGAA
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            1729 10 +     68526 TTT-TT----A-AAAA
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        41875 10 +     89929 TTT-TT----A-AAAA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43289 10 +     51399 TTT-TT----A-AAAA
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299526 10 -  14605196 ttt-tt----a-aaaa
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3368 10 +     22620 TTT-CT----A-AGAA
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pithecia_albicans.k141_1476471                              5174 10 +     26961 TTT-TT----A-AAAA
i Pithecia_albicans.k141_1476471                         I 1 C 0
s Pithecia_chrysocephala.k141_839575                          1319 10 +     23417 TTT-CT----A-AAAA
i Pithecia_chrysocephala.k141_839575                     I 1 C 0
s Pithecia_hirsuta.k141_305604                                5166 10 +     29694 TTT-TT----A-AAAA
i Pithecia_hirsuta.k141_305604                           I 1 C 0
s Pithecia_mittermeieri.k141_446740                          30192 10 +     52772 TTT-TT----A-AAAA
i Pithecia_mittermeieri.k141_446740                      I 1 C 0
s Pithecia_pissinattii.k141_1824269                           5188 10 +     26198 TTT-TT----A-AAAA
i Pithecia_pissinattii.k141_1824269                      I 1 C 0
s Pithecia_pithecia.tarseq_165                             3941736 10 +   4542175 TTT-CT----A-AAAA
i Pithecia_pithecia.tarseq_165                           I 1 C 0
s Pithecia_vanzolinii.k141_1697688                            5152 10 -     23490 TTT-TT----A-AAAA
i Pithecia_vanzolinii.k141_1697688                       I 1 C 0
s Plecturocebus_bernhardi.k141_2549090                        9408 10 -     39866 TTT-GT----A-AAAA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18574 10 +     34906 TTT-GT----A-AAAA
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       22836 10 +     87950 TTT-GT----A-AAAA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23665 10 +     88961 TTT-GT----A-AAAA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9336 10 +     39403 TTT-GT----A-AAAA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          23117 10 -     87928 TTT-GT----A-AAAA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         30076 10 +     60166 TTT-GT----A-AAAA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30273 10 +     67232 TTT-GT----A-AAAA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          25746 10 +     90634 TTT-GT----A-AAAA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          23118 10 -     89403 TTT-GT----A-AAAA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189134656 10 + 189387572 ttt-tt----a-aaaa
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9574265 10 +   9816681 TTT-TT----A-AAAA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76829 10 -     81375 TTT-TT----A-AAAA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8646 10 +     19060 TTT-TT----A-AAAA
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            12426  9 -     21651 -TT-AG----A-AGAA
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            16704 10 -     21811 TGT-CA----A-GGAA
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteropus_alecto.KB030862.1                              22978349  8 +  28871421 TCT-CA----A-AG--
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Puma_concolor.QAVW01001104.1                            20275875 10 -  38429054 TCT-CA----A-AGAA
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             18638 10 -     91421 TTT-TT----A-AAAA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612761 10 +   7812017 TTT-TT----A-AAAA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18668 10 -     72585 TTT-TT----A-AAAA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  8082  9 +     55207 -TT-CA----T-GAAA
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53572673  9 +  90668790 -TT-AG----A-AGAA
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        368394 10 -   3329780 TTT-CA----A-AGAA
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                            10336 10 -     11128 TTT-TT----A-AAAA
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239704 10 - 195417433 ttt-tt----a-aaaa
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675351 10 +   7961872 TTT-TT----A-AAAA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89421  8 -     96226 TCT-CA----A-AG--
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154692 10 -    313613 TAG-CA----A-ATAA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                         3510 10 -     12572 TTT-TT----A-AAAA
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30362 10 +     39453 TTT-TT----A-AAAA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           10870 10 +     27826 TTT-TT----A-AAAA
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10411 10 -     19483 TTT-TT----A-AAAA
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3709 10 -     12762 TTT-TT----A-AAAA
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3554 10 +     13763 TTT-TT----A-AAAA
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     2323  9 -     30804 -TC-AG----A-AGAA
i Sigmodon_hispidus.SigHis_scaffold_42075                I 3 C 0
s Sorex_araneus.JH798187.1                                13652524 10 -  18376816 TGT-CA----T-TGAA
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1955674 15 -   3870691 ttt-tttttttaagaa
i Spermophilus_dauricus.KZ294078.1                       I 2 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              19843 10 -    196729 TCT-CA----A-AGGA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6813216  9 +  69701581 -TT-CA----T-AGAA
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                12748 10 +     41958 TCT-CA----A-AGAA
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73935 10 +    116680 TGT-TA----A-AGAT
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tarsius_lariang.k141_2201908                               27313 10 +     70052 TTT-TT----T-AAAA
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                2110 10 -     16117 TTT-TT----T-AAAA
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186432034 10 + 186847797 ttt-tt----a-aaaa
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106937 10 +    114563 CTT-TA----A-AGAT
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   7657 10 +      8208 TGT-TA----A-AGAA
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     82977 10 +    610378 TTT-CA----A-AGAT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         14448 10 -     20410 TTT-TT----A-AAAA
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3571 10 -     12674 TTT-TT----A-AAAA
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14556 10 +     19930 TTT-TT----A-AAAA
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      10958 10 -     19997 TTT-TT----A-AAAA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            51100 10 -     60166 TTT-TT----A-AAAA
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18562 10 -     27529 TTT-TT----A-AAAA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                        194 10 +      9229 TTT-TT----A-AAAA
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          12096 10 -     21137 TTT-TT----A-AAAA
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                     196 10 +      9131 TTT-TT----A-AAAA
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                          160 10 -      3730 TTT-TT----A-AAAA
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28428 10 +     32220 TTT-TT----A-AAAA
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942525 10 +   6242583 TTT-TT----A-AAAA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11778 10 +     20839 TTT-TT----A-AAAA
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    2000  9 +     27266 -TT-CA----T-GGAA
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tupaia_chinensis.KB320699.1                              2157670 10 +   4065304 ttt-tt----g-aaaa
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_306982                      92 10 -      4186 TTT-TT----G-AAAA
i Tupaia_tana.TupTan_flattened_line_306982               C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15739553  9 +  33153633 -TT-CA----T-AGAA
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54809 10 -     77625 TAG-CA----A-ATAA
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Vicugna_pacos.KN270157.1                                 5373506  9 -   5488506 -tt-ca----t-acaA
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 12504 10 -     43706 TTT-CA----G-AGAT
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          2664 10 +    224448 TTT-T-----AAAGAA
i Xerus_inauris.XerIna_scaffold_2302                     I 2 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      16342  9 +     63895 -TT-AG----A-AGAC
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_761354             113  9 -      1267 -TT-CA----T-AGAA
i Ziphius_cavirostris.ZipCav_flattened_line_761354       C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                        67149665 1414 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     8427 743 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T

a score=0.000000
s hg38.chrUn_KI270753v1                                      10313 1 +     62944 T
s Acinonyx_jubatus.LLWD01001279.1                           828871 1 -   1699592 G
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     72787 1 +     87051 G
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     75882 1 -     89534 A
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 4
s Allenopithecus_nigroviridis.k141_3361533                   18164 1 -     52922 G
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         18101 1 -     28001 G
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8596 1 -     18505 G
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9449 1 -     12518 G
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              9906 1 +     51355 G
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                3013 1 -     36483 G
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13466 1 +     28687 G
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 1938 1 +     27940 G
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            3017 1 -      9457 G
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             1975 1 +     30492 G
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              5968 1 +     47717 G
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              2706 1 +      5663 G
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             17157 1 +     50774 G
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          677597 1 -   2318259 G
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      187144 1 +    412891 G
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469            100072 1 -    100397 G
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      14203 1 +     20879 G
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6552 1 +     43469 G
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21210169 1 -  21539123 G
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               44965 1 -     48001 G
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 27769 1 -     30947 G
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9541 1 -     89868 G
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              13925 1 -     40414 G
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                21814 1 +     72325 G
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193445 1 +  23207421 G
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         3910 1 -     18090 G
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    28682 1 +     34529 G
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    202684 1 -    288883 G
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20275924 1 +  48749331 G
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1128477 1 -   1948126 G
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18086562 1 +  45695690 G
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2822522 1 +   4408762 G
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                102791 1 -    122966 G
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   62294 1 +     81800 G
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31476 1 -     95584 G
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55577 1 -    119600 G
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10003994 1 -  17673402 G
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2336466 1 -   7040546 G
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  404764 1 -   1652518 G
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17800895 1 -  60362399 G
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     1638 1 -     43241 G
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9036338 1 -   9314153 G
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17960809 1 -  59632846 G
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18502111 1 +  63665305 G
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18831703 1 +  46296322 G
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18062423 1 -  44709034 G
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    2784 1 -     12242 A
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           156829 1 -    496798 g
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6895 1 -     11696 G
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138757 1 +    179628 A
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     95642 1 +    217609 G
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18351327 1 -  23392119 a
i Cavia_aperea.AVPZ01000300.1                            I 345 C 0
s Cavia_porcellus.DS562891.1                              18363590 1 -  23407841 a
i Cavia_porcellus.DS562891.1                             I 345 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                       102472 1 +    143979 a
i Cavia_tschudii.CavTsc_scaffold_8919                    I 345 C 0
s Cephalopachus_bancanus.k141_1423433                         6328 1 +     31688 G
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4479123 1 +   4669795 g
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3617 1 +     17872 G
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4212 1 -     14043 G
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12307 1 +     27781 G
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12461 1 -     20310 G
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15437 1 +     29689 G
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10197 1 -     20078 G
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          18112 1 -     27936 G
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            6983 1 -     17152 G
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826707 1 +  39242232 G
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226215 1 -  21565898 G
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43334 1 -     53127 G
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3584 1 +     13442 G
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       18130 1 -     27947 G
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1159 1 +     10558 G
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4164 1 +     14005 G
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1774 1 -      8501 G
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheracebus_lucifer.k141_49986                               1395 1 -     17098 G
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1271 1 +     17877 G
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            158838 1 -    216457 G
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63313 1 +     76511 G
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254429 1 +   2543920 A
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_israelita.k141_747660                           99921 1 +    146308 G
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          31728 1 -     50570 G
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18432034 1 -  18827391 G
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18531 1 -     50209 G
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425535 1 + 135778131 g
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1914036 1 +   2368649 g
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952284 1 + 200372422 G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40557 1 +     84244 G
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549560 1 -  53390261 a
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1910 1 +     23735 G
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 52042 1 +     63868 A
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_239572              3313 1 -      5012 G
i Crocidura_indochinensis.CroInd_scaffold_239572         I 113 I 76
s Cryptoprocta_ferox.CryFer_flattened_line_16129             30052 1 -     87169 G
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37710 1 +     51376 A
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900             1404 1 -     75252 A
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            64793 1 +   2246927 G
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16813076 1 +  35494412 G
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8631896 1 +  20541912 G
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37915 1 +     67921 A
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 35044 1 -     42551 A
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       313470 1 +    607251 G
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          22548 1 -    110024 G
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                            2468 1 +      8657 G
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2148609 1 -  14770903 G
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Erythrocebus_patas.Contig38                             21208707 1 -  21539334 G
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12758 1 +    133382 G
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             26704 1 -     44125 T
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20238615 1 + 206538554 G
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20197490 1 + 205367284 G
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 11150 1 -     36744 G
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             852096 1 +   3816255 A
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               3884 1 -      9135 G
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     610715 1 -    660261 G
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            32853 1 +     49224 g
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              19558 1 -     32273 T
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341694 1 + 186649187 t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   34870 1 +     78134 G
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243860 1 +    327341 G
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 19919 1 +     36099 G
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20663729 1 +  22651954 A
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       111950 1 +   1711038 G
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 3
s Hipposideros_galeritus.HipGal_scaffold_101188                516 1 +      9903 G
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 I 3
s Hoolock_leuconedys.ctg274                                    438352 1 +    630532 G
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46600 1 +     55795 G
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84628 1 +    135385 A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7522543 1 -   7955117 g
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                 312 1 -     31341 G
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8278615 1 -   9596543 A
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                  282 1 -     18011 G
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         15973 1 -     38430 G
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    18254 1 -     42476 G
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             269344 1 -    662738 G
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1440665 1 +   1826925 G
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17957049 1 -  59628241 G
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                              10475 1 +     40492 G
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679729 1 +  60120075 G
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16246 1 -     26193 G
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            84022 1 -    114318 G
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9713 1 -     23192 G
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19177 1 -     29190 G
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27755 1 +     37952 G
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842832 1 + 187317192 g
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461410 1 -  25927173 g
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83611 1 +     89720 G
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10604 1 +     20474 G
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10401 1 -     14993 G
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333263 1 -    668171 G
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8713 1 -     24072 G
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29344 1 -     45290 G
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23940932 1 -  24302211 G
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355048 1 +    752769 G
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              19758 1 +    737560 a
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              51776 1 -    317179 a
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33104822 1 -  40650429 g
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        14762 1 -    207569 G
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 34794 1 +    140813 C
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12184252 1 -  29670104 G
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    4967 1 +     10310 G
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                17642 1 -     19307 G
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11262529 1 -  27267610 G
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1851839 1 +   8254450 A
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             35523 1 +     64694 A
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                          12612 1 -     28506 G
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    28459 1 -    437263 G
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 143234 1 -    366855 G
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   2756 1 +     82753 G
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           8573 1 +     14753 A
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84363182 1 - 120012414 g
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87652682 1 - 129401213 G
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31357416 1 -  89631738 G
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90755171 1 - 130317789 G
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              6373 1 +     14296 G
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     72974 1 -     80779 A
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                282314 1 -  10118263 G
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1589626 1 -   6019432 G
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3905746 1 -   4330536 G
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_1392844                        145 1 +       242 G
i Myotis_myotis.MyoMyo_scaffold_1392844                  C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190560 1 +    196477 G
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2036973 1 -   3037898 G
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               18662 1 +     21681 G
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5867423 1 +   7148211 G
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    759421 1 +    783361 G
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150986 1 -   9404916 G
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Ochotona_princeps.JH802162.1                             1365843 1 +   3988456 G
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  749197 1 +  11899542 a
i Octodon_degus.JH651603.1                               C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         146260 1 +    630418 G
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          78616 1 -    150152 G
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   27189 1 +     28053 G
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    82677 1 +    102263 G
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2783324 1 -  10937097 G
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       464076 1 -    559221 G
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 6
s Ovis_aries.CM001607.2                                   17587881 1 +  44047080 G
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      175873 1 -    191736 G
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    47659 1 +     80009 t
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146521 1 + 189151597 t
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152689 1 +    230217 G
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                266000 1 +  18783137 G
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4722826 1 -   8748460 G
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1266782 1 -   2937107 g
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183446738 1 + 183742232 g
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10388 1 +     20448 G
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567196 1 +  20919399 G
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   9128 1 +     41871 G
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12421 1 +     27711 G
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3420 1 -     11374 G
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14148 1 -     78924 A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18197307 1 -  18517816 G
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_221660                      164 1 -      2102 a
i Petromus_typicus.PetTyp_scaffold_221660                C 0 I 261
s Phocoena_phocoena.PhoPho_flattened_line_24159              10380 1 +     63832 G
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            1739 1 +     68526 G
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        41885 1 +     89929 G
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43299 1 +     51399 G
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299536 1 -  14605196 g
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3378 1 +     22620 G
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pithecia_albicans.k141_1476471                              5184 1 +     26961 G
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1329 1 +     23417 G
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                5176 1 +     29694 G
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          30202 1 +     52772 G
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           5198 1 +     26198 G
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3941746 1 +   4542175 G
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            5162 1 -     23490 G
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9418 1 -     39866 G
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18584 1 +     34906 G
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       22846 1 +     87950 G
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23675 1 +     88961 G
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9346 1 +     39403 G
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          23127 1 -     87928 G
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         30086 1 +     60166 G
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30283 1 +     67232 G
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          25756 1 +     90634 G
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          23128 1 -     89403 G
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189134666 1 + 189387572 g
i Pongo_abelii.CM009266.2                                C 0 I 21
s Pongo_pygmaeus.ctg66                                     9574275 1 +   9816681 G
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76839 1 -     81375 G
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8656 1 +     19060 G
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            12435 1 -     21651 C
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            16714 1 -     21811 G
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Puma_concolor.QAVW01001104.1                            20275885 1 -  38429054 G
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             18648 1 -     91421 G
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612771 1 +   7812017 G
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18678 1 -     72585 G
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  8091 1 +     55207 G
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53572682 1 +  90668790 G
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        368404 1 -   3329780 G
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 3
s Rhinopithecus_bieti.k119_217274                            10346 1 -     11128 G
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239714 1 - 195417433 g
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675361 1 +   7961872 G
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154702 1 -    313613 A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                         3520 1 -     12572 G
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30372 1 +     39453 G
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           10880 1 +     27826 G
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10421 1 -     19483 G
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3719 1 -     12762 G
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3564 1 +     13763 G
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     2332 1 -     30804 T
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Sorex_araneus.JH798187.1                                13652534 1 -  18376816 G
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1955689 1 -   3870691 g
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              19853 1 -    196729 G
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6813225 1 +  69701581 G
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                12758 1 +     41958 G
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73945 1 +    116680 G
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tarsius_lariang.k141_2201908                               27323 1 +     70052 G
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                2120 1 -     16117 G
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186432044 1 + 186847797 g
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              106947 1 +    114563 G
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 170
s Tolypeutes_matacus.TolMat_scaffold_228639                   7667 1 +      8208 G
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     82987 1 +    610378 G
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         14458 1 -     20410 G
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3581 1 -     12674 G
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14566 1 +     19930 G
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      10968 1 -     19997 G
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            51110 1 -     60166 G
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18572 1 -     27529 G
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                        204 1 +      9229 G
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          12106 1 -     21137 G
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                     206 1 +      9131 G
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                          170 1 -      3730 G
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28438 1 +     32220 G
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942535 1 +   6242583 G
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11788 1 +     20839 G
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    2009 1 +     27266 G
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tupaia_chinensis.KB320699.1                              2157680 1 +   4065304 t
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_306982                     102 1 -      4186 T
i Tupaia_tana.TupTan_flattened_line_306982               C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15739562 1 +  33153633 G
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54819 1 -     77625 A
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Vicugna_pacos.KN270157.1                                 5373515 1 -   5488506 G
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 12514 1 -     43706 G
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          2674 1 +    224448 A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      16351 1 +     63895 A
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_761354             122 1 -      1267 G
i Ziphius_cavirostris.ZipCav_flattened_line_761354       C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202 0 +      8798 C
e Galago_senegalensis.k141_631886                             7400 0 +     11339 C
e Galago_moholi.ctg2040                                     429710 0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964 2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445 0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734 0 -     33856 C
e Perodicticus_potto.k141_1186926                              597 0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219 0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                89429 0 -     96226 C
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Pteropus_alecto.KB030862.1                              22978357 0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                        67149665 1414 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869 0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414 0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947 0 - 196305487 C
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Mungos_mungo.MunMun_flattened_line_23663                   36398 7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Macroglossus_sobrinus.MacSob_scaffold_8222                 92277 0 +     94391 C
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     8427 743 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23379 0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689 0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Eidolon_helvum.AWHC01278734.1                                108 0 +      2334 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11668671 0 + 224834208 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538 0 +      5281 C
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T

a score=0.000000
s hg38.chrUn_KI270753v1                                      10314 21 +     62944 A---TA-----A----T---------AG--CAG-----CA---T----A---AGGAA---CA
s Acinonyx_jubatus.LLWD01001279.1                           828872 20 -   1699592 A---TG-----A----C---------AG--CA-G----CA---T----A----GGAA---CA
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     72788 28 +     87051 G---TA-----A----TA-CT-G-T-AA--CA-GA-AGCC---T----A---AG-AA---CA
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     75887  9 -     89534 -------------------------------------------T----A---AGGAA---CA
i Allactaga_bullata.AllBul_scaffold_9566                 I 4 C 0
s Allenopithecus_nigroviridis.k141_3361533                   18165 21 -     52922 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         18102 21 -     28001 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8597 21 -     18505 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9450 21 -     12518 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              9907 21 +     51355 A---TA-----A----T---------AG--CAA-----CA---T----A---AGGAA---CA
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                3014 21 -     36483 A---TA-----A----T---------AG--CAG-----CA---T----A---AGGAA---CA
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13467 21 +     28687 A---TA-----A----T---------AG--CAG-----CA---T----A---AGGAA---CA
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 1939 21 +     27940 A---TA-----A----T---------AG--CAG-----CA---T----A---AGGAA---CA
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            3018 21 -      9457 A---TG-----A----T---------AG--CAG-----CA---T----A---AGGAA---CA
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             1976 21 +     30492 A---TG-----A----T---------AG--CAG-----CA---T----A---AGGAA---CA
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              5969 21 +     47717 A---TA-----G----T---------AG--CAG-----CA---T----A---AGGAA---CA
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              2707 21 +      5663 A---TA-----A----T---------AG--CAG-----CA---T----A---AGGAA---CA
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             17158 21 +     50774 A---TA-----A----T---------AG--CAG-----CA---T----A---AGGAA---CA
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          677598 25 -   2318259 A---TG-----G----T---TAG-C-AG--GA-G----CA---T----A---AGGAA---TA
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      187145 24 +    412891 ACAATA-----A----C---------AA--CA-G----CA---T----A---AAGAA---CA
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469            100073 25 -    100397 A---TG-----G----T---TAG-C-AG--CG-G----CA---T----A---AGGAA---TA
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      14204 29 +     20879 A---TA-----A----TA-CT-G-T-AA--CA-GC-AGCA---T----A---ACAAA---TA
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6553 24 +     43469 ACAATA-----A----C---------AA--CA-G----CA---T----A---AAGAA---CA
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21210170 21 -  21539123 A---TA-----A----T---------AG--CAG-----CA---T----A---AGGAA---CA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               44966 21 -     48001 A---TA-----A----T---------AG--CAG-----CA---T----A---AGGAA---CA
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 27770 21 -     30947 A---TA-----A----T---------AG--CAG-----CA---T----A---AGGAA---CA
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9542 21 -     89868 A---TA-----A----T---------AG--CAG-----CA---T----A---AGGAA---CA
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              13926 21 -     40414 A---TA-----A----T---------AG--CAG-----CA---T----A---AGGAA---CA
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                21815 21 +     72325 A---TA-----A----T---------AG--CAG-----CA---T----A---AGGAA---CA
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193446 25 +  23207421 A---TG-GTTAA----T---------AG--CA-G----CA---T----A---AGGAA---TA
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         3911 25 -     18090 A---TG-GTTAA----T---------AG--CA-G----CA---T----A---AGGAA---TA
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    28683 25 +     34529 A---TG-----G----T---TAG-C-AG--CA-G----CA---T----A---AGGAA---TA
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    202685 25 -    288883 A---TG-----g----t--ta-g-c-ag--ca-----gca---t----a---aggaa---TA
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20275925 25 +  48749331 A---CG-----g----t--ta-g-c-ag--ca-----gca---t----a---aggaa---TA
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1128478 25 -   1948126 A---TG-----G----T---TAG-C-AG--CA-G----CA---T----A---CGGAA---CA
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18086563 25 +  45695690 A---CG-----g----t--ta-g-c-ag--ca-----gca---t----a---aggaa---TA
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2822523 25 +   4408762 A---TG-----g----t--ta-g-c-ag--ca-----gca---t----a---aggaa---TA
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                102792 21 -    122966 G---TA-----A----T---------AG--CAG-----CA---T----A---AGGAA---TA
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   62295 21 +     81800 G---TA-----A----T---------AG--CAG-----CA---T----A---AGGAA---TA
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31477 21 -     95584 G---TA-----A----T---------AG--CAG-----CA---T----A---AGGAA---TA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55578 21 -    119600 G---TA-----A----T---------AG--CAG-----CA---T----A---AGGAA---TA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10003995 25 -  17673402 A---TG-----GTTAAC---------AG--CA-G----CA---T----A---AGGAA---CA
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2336467 25 -   7040546 A---TG-----GTTAAC---------AG--CA-G----CA---T----A---AGGAA---CA
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  404765 25 -   1652518 A---TG-----GTTAAC---------AG--CA-G----CA---T----A---AGGAA---CA
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17800896 21 -  60362399 A---TG-----A----T---------AG--CA-G----CA---T----AA---GGAA---CA
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     1639 21 -     43241 A---TG-----A----T---------AG--CA-G----CA---T----AA---GGAA---CA
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9036339 21 -   9314153 A---TG-----A----T---------AG--CA-G----CA---T----AA---GGAA---Ca
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17960810 21 -  59632846 A---TG-----A----T---------AG--CA-G----CA---T----AA---GGAA---Ca
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18502112 21 +  63665305 A---TG-----A----T---------AG--CA-G----CA---T----AA---GGAA---Ca
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18831704 25 +  46296322 A---TG-----G----T---TAG-C-AG--CA-G----CA---T----A---AGGAA---TA
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18062424 25 -  44709034 A---TG-----G----T---TAG-C-AG--CA-G----CA---T----A---AGGAA---TA
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    2785 33 -     12242 G---TA-AATAA----GT-TT-G-T-AA--CA--ATAGTA---T----A---AGGAA---CA
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           156830 21 -    496798 g---tg-----a----c---------ag--cag-----ct---c----a---aagag---ca
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6896 24 -     11696 ACAATA-----A----C---------AA--CA-G----CC---T----A---AAAAA---CG
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138758 20 +    179628 C---AA-----A----TA-CA-G-T-TG--CA-GT-AGAT----------------------
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 7
s Catagonus_wagneri.CatWag_scaffold_2839                     95643 25 +    217609 A---TA-----G----G---T-G-ACAG--CA-G----CA---T----A---AGGAA---GA
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18351328 32 -  23392119 g---ta-aatAA----G--TT-A-T-AA--CA-GC-AGCA---T----A---AGGAA---CA
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18363591 32 -  23407841 g---ta-aatAA----G--TT-A-T-AA--CA-GC-AGCA---T----A---AGGAA---CA
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                       102473 32 +    143979 G---TA-AATAA----G--TT-A-T-AA--CA-GC-AGCA---T----A---AGGAA---CA
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         6329 21 +     31688 G---TG-----A----C---------AG--ACG-----CT---C----A---AAGAG---CA
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4479124 21 +   4669795 a---ta-----g----t---------ag--CAG-----Ca---c----a---aggaa---ca
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3618 21 +     17872 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4213 21 -     14043 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12308 21 +     27781 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12462 21 -     20310 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15438 21 +     29689 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10198 21 -     20078 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          18113 21 -     27936 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            6984 21 -     17152 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826708 21 +  39242232 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226216 21 -  21565898 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43335 21 -     53127 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3585 21 +     13442 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       18131 21 -     27947 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1160 21 +     10558 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4165 21 +     14005 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1775 21 -      8501 A---CG-----A----T---------AAAAAG-G----CA---C----A---GGTAA-----
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheracebus_lucifer.k141_49986                               1396 21 -     17098 G---TA-----A----T---------AG--CAG-----CA---T----A---AGGAA---CA
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1272 21 +     17877 G---TA-----A----T---------AG--CAG-----CA---T----A---AGGAA---CA
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            158839 21 -    216457 G---TA-----A----T---------AG--CAG-----CA---T----A---AGGAA---CA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63314 21 +     76511 G---TA-----A----T---------AG--CAG-----CA---T----A---AGGAA---CA
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254430 33 +   2543920 G---GA-AATAA----G--TT-CAT-AA--CA-GT-AGca---t----a---agaaa---ca
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_israelita.k141_747660                           99922 21 +    146308 G---TA-----A----T---------AG--CAG-----CA---T----A---ATGAA---TA
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          31729 21 -     50570 G---TA-----A----T---------AG--CAG-----CA---T----A---ATGAA---TA
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18432035 21 -  18827391 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18532 21 -     50209 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425536 21 + 135778131 a---ta-----g----t---------ag--CAG-----Ca---c----a---aggaa---ca
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1914037 21 +   2368649 a---ta-----g----t---------ag--CAG-----Ca---c----a---aggaa---ca
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952285 21 + 200372422 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40558 21 +     84244 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549561 21 -  53390261 a---tt-----a----t---------aa--ct-----aca---T----G---AGGAA---CA
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1911 21 +     23735 A---TG-----A----T---------AT--CA-G----CA---T----A---AGGAA---CA
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 52043 28 +     63868 G---TG-----A----TA-CT-G-T-GG--CA-GA-AGCA---T----A---GG-AA---CA
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               4309 25 -     19598 A---TG-----C----T---------AA--TA--A---TA---GTGTTA---ACACA---CA
i Crocidura_indochinensis.CroInd_scaffold_37019          I 1 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             30053 21 -     87169 A---TG-----A----C---------AG--CT-G----CA---T----AA---GAAA---CA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37711 36 +     51376 G---TG-AATAA----AT-CT-G-T-AG--CA-GT-AGTA---T----A---AGGAAGGAAA
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900             1405 32 -     75252 G---TA-AGCAA----G--TT-A-T-AA--TA-GT-AGCA---T----A---AGGAA---CA
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            64794 21 +   2246927 A---TG-----A----T---------AAAAAA-G----CA---C----A---AATAA-----
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16813077 25 +  35494412 A---TG-GTTAA----T---------AG--CA-G----CA---T----A---AGGAA---TA
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8631897 24 +  20541912 ACAACA-----A----C---------AA--GA-G----Ca---t----a---aagaa---ca
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    37916 30 +     67921 G---TA-AAAAA----GT-TT-G-T-AA--TA-GT-AGCA---T----A---A---A---CA
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 35045 32 -     42551 G---TA-GATAA----G--TT-G-A-GA--CG-GT-AGCA---T----A---ATGAA---CA
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.AWHC01278734.1                                108 21 +      2334 A---TA-----A----C---------AA--CA-G----CA---T----A---AAGAA---CA
i Eidolon_helvum.AWHC01278734.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       313471 25 +    607251 A---TG-----G----T---TAG-C-AG--CA-G----CA---T----A---AGGAA---TA
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          22549 28 -    110024 T---TA-----A----TA-CT-G-C-AG--TC-GA-AGCA---C----A---GG-CA---CA
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                            2469 28 +      8657 T---TA-----A----TA-CT-G-C-AG--CC-AA-AGCA---C----A---GG-CA---CA
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2148610 23 -  14770903 ACTAGA-----A----C---------AG--CA--A---CA---T----a---a-gaa---ca
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Erythrocebus_patas.Contig38                             21208708 21 -  21539334 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12759 25 +    133382 A---TG-GTTAA----T---------AG--CA-G----CA---T----A---AGGAA---TA
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             26705 25 -     44125 A---TG-GTTAA----T---------AG--CA-G----CA---T----A---AGGAA---TA
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20238616 20 + 206538554 A---TG-----A----C---------AG--CA-G----CA---T----A----GGAA---CA
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20197491 20 + 205367284 A---TG-----A----C---------AG--CA-G----CA---T----A----GGAA---CA
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 11151 20 -     36744 A---TG-----A----C---------AG--CA-G----CA---T----A----GGAA---CA
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             852097 33 +   3816255 A---TAAGT-AA----TT-TT-G-T-aa--ca-gt-agca---t----g---ggaat---ta
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               3885 24 -      9135 A---TA-----A----T---------AA--CA-GC-AGCA---T----A---AGGAA---CA
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     610716 25 -    660261 A---TG-----G----T---TAG-C-AG--CA-G----CA---T----A---AGGAA---TG
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            32854 29 +     49224 g---TA-----A----TA-CT-G-T-AA--CA-GT-AGGA---T----A---ATAAA---CA
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              19559 21 -     32273 A---TA-----A----T---------AG--CAG-----CA---T----A---AGGAA---CA
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341695 21 + 186649187 a---ta-----a----t---------ag--cag-----ca---t----a---aggaa---ca
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   34871 29 +     78134 G---TA-----A----TA-CT-G-T-AA--CA-GT-AGGG---T----A---ATAAA---CA
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243861 21 +    327341 G---TG-----A----C---------AG--CT-G----CA---T----AA---GGAA---CA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 19920 25 +     36099 A---TG-----G----T---TAG-C-AG--GA-G----CA---T----A---AGGAA---TA
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20663730 33 +  22651954 A---TAAGT-AG----TT-TT-G-T-AA--CA-GT-AGCA---T----A---GGAAT---TA
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       111954 21 +   1711038 A---TA-----A----C---------AA--CA-G----CA---T----A---GGGAa---ca
i Hipposideros_armiger.JXIK01000431.1                    I 3 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188                520 21 +      9903 A---TA-----A----C---------AA--CA-G----CA---T----A---GGGAA---CA
i Hipposideros_galeritus.HipGal_scaffold_101188          I 3 C 0
s Hoolock_leuconedys.ctg274                                    438353 21 +    630532 A---TA-----A----T---------AG--CAG-----CA---T----A---AGGAA---CA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46601 18 +     55795 -----------A----C---------AG--CA-G----CA---T----AA---GGAA---GA
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23379 32 -    143317 G---TA-AATAA----A--TT-G-T-AA--CA-GT-AGCA---T----A---AGGAA---CA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84629 33 +    135385 A---CAAGT-AA----TTTCA-G---AA--CA-GT-AACA---T----A---AGGGA---CC
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7522544 29 -   7955117 a---ta-----a----ta-cT-G-T-AA--CA-GA-AGCA---T----A---ACAAA---CA
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                 313 25 -     31341 A---TG-GTTAA----T---------AG--CA-G----CA---T----A---AGGAA---TA
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8278616 29 -   9596543 A---TA-----A----TA-CC-A-T-AA--CA-GA-AGTG---T----A---AAGAA---CA
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                  283 25 -     18011 A---TG-GTTAA----T---------AG--TA-G----CA---T----A---AGGAA---TA
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         15974 21 -     38430 A---TA-----A----T---------AG--CAG-----CA---T----A---AGGAA---CA
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    18255 23 -     42476 ACTGGA-----A----C---------AG--CA--A---GA---T----A---A-AAA---CA
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             269345 25 -    662738 A---TG-GTTAA----T---------AG--CA-G----CA---T----A---AGGAA---TA
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1440666 21 +   1826925 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17957050 21 -  59628241 A---TG-----A----T---------AG--CA-G----CA---T----AA---GGAA---Ca
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                              10476 21 +     40492 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679730 21 +  60120075 A---TA-----G----C---------AG--CAG-----CA---C----A---AGGAA---CA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16247 21 -     26193 A---TA-----G----C---------AG--CAG-----CA---C----A---AGGAA---CA
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            84023 21 -    114318 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9714 21 -     23192 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19178 21 -     29190 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27756 21 +     37952 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842833 21 + 187317192 a---ta-----g----t---------ag--CAG-----Ca---c----a---aggaa---ca
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461411 21 -  25927173 a---ta-----g----t---------ag--CAG-----Ca---c----a---aggaa---ca
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83612 21 +     89720 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10605 21 +     20474 A---CA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10402 21 -     14993 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333264 21 -    668171 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8714 21 -     24072 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29345 21 -     45290 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92277 13 +     94391 A---TA-----A----C---------AA--CA-G----CA---G------------------
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 6
s Mandrillus_leucophaeus.scaffold280                      23940933 21 -  24302211 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355049 21 +    752769 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              19759 21 +    737560 a---gg-----a----c---------ag--ca-----ggg---t----a---agaaa---ca
i Manis_javanica.JSZB01003497.1                          C 0 I 501
s Manis_pentadactyla.KN006162.1                              51777 21 -    317179 a---gg-----a----c---------ag--ca-----ggg---t----a---agaaa---ca
i Manis_pentadactyla.KN006162.1                          C 0 I 627
s Marmota_marmota.CZRN01000018.1                          33104823 29 -  40650429 a---ta-----a----ta-cT-G-T-AA--CA-GA-AGCA---T----A---ACAAA---CA
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        14763 22 -    207569 G---TA-----A----C---------AA--CA-G----CA---TT---A---AGGAA---CA
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 34795 28 +    140813 G---TA-----A----TA-TT-G-T-AC--CA-GA-AGAG---T----A---GG-AA---CA
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12184253 28 -  29670104 A---CA-----A----TA-AT-G-T-Gg--ca-ga-aaca---g----a---ga-ag---ca
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    4968 25 +     10310 A---TG-GTTAA----T---------AG--CA-G----CA---T----A---AGGAA---TA
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                17643 24 -     19307 ACAGTA-----A----C---------AA--CA-G----CA---T----A---AAGAA---CA
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11262530 28 -  27267610 T---TA-----G----TA-CT-G-C-AG--CC-GA-AGCA---C----A---GG-CA---CA
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1851840 23 +   8254450 CTTATA-----A----C---------AA--TA--A---CA---C----A---G-GAA---Ca
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             35524 23 +     64694 CTTATA-----A----C---------AA--TA--A---CA---C----A---G-GAA---CA
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                          12613 21 -     28506 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    28460 25 -    437263 A---TG-GTTAA----T---------AG--CA-G----CA---T----A---AGGAA---TA
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 143235 24 -    366855 ACAGTA-----A----A---------AA--CA-G----CA---T----A---AGGAA---CA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   2757 25 +     82753 A---CG-----G----T---TAG-C-AG--CA-G----CA---T----A---AGGAA---CA
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           8574 23 +     14753 ACTAGA-----A----C---------AG--CA--A---CA---T----A---A-GAA---CA
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84363183 28 - 120012414 g---cA-----A----TA-CT-G-G-AA--CA-GA-AGCC---T----A---CA-AG---CA
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87652683 28 - 129401213 G---CA-----A----TA-CT-G-G-AA--CA-GA-AGCC---T----A---GA-AG---CA
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31357417 28 -  89631738 G---CA-----A----TA-CT-G-T-AA--CA-GA-AGCC---T----A---GA-AG---CA
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90755172 28 - 130317789 A---CA-----A----TA-CT-G-G-AA--CA-GA-AGCC---T----A---GA-AG---CA
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              6374 29 +     14296 G---TA-----A----TA-CT-G-T-AA--CT-GT-AGGG---T----A---ATAAA---CA
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     72975 33 -     80779 G---TA-AATAA----GT-TT-G-T-AA--CA-GT-AGTA---T----A---AGGAA---CA
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                282315 23 -  10118263 ACTAGA-----A----C---------ag--ca-----aaa---t----a---a-gaa---ca
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1589627 23 -   6019432 ACTAGA-----A----C---------AG--CA--A---CA---T----A---A-GAA---Ca
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3905747 23 -   4330536 ACTAGA-----A----C---------AG--CA--A---CA---T----a---a-gaa---ca
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_1392844                        146 23 +       242 ACTAGA-----A----C---------AG--CA--A---CA---T----A---A-GAA---CA
i Myotis_myotis.MyoMyo_scaffold_1392844                  C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190561 22 +    196477 A---TA-----G----T---------AA--AA-G----CA---T----AATTAGAAG-----
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 C 0
s Nannospalax_galili.KL204047.1                            2036974 28 -   3037898 G---TA-----G----TA-CT-A-T-AG--CA-GA-TGCA---C----A---AA-AA---CA
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               18663 21 +     21681 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5867424 25 +   7148211 A---TG-GTTAA----T---------AG--CA-G----CA---T----A---AGGAA---TA
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    759422 22 +    783361 ACAATA-----A----C---------AA--CA-G-----A---T----A---AGGAA---C-
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9150987 21 -   9404916 A---TG-----A----T---------AG--CA-G----CA---T----AA---GGAA---Ca
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Ochotona_princeps.JH802162.1                             1365844 29 +   3988456 C---AA-----A----TA--A-GAT-AA--CA-GT-AGCA---T----G---AGGAA---CA
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  749198 18 +  11899542 g---ta-aaaga----at-tt-a-t-aa--ct------------------------------
i Octodon_degus.JH651603.1                               C 0 I 44
s Odocoileus_virginianus.KZ100018.1                         146261 25 +    630418 A---TG-----G----C---TAG-C-AG--CA-G----CA---T----A---AGGAA---TA
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          78617 25 -    150152 A---TG-----G----T---TAG-C-AG--CA-G----CA---T----A---AGGAA---TA
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   27190 28 +     28053 T---TA-----A----TA-CT-G-C-AG--CC-GA-AGCA---C----A---GG-TA---CA
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    82678 25 +    102263 G---GA-----A----TA-CT-G-T-AG--CA-GA-AGCA---T----A---GG-A------
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2783325 25 -  10937097 A---TG-GTTAA----T---------AG--CA-G----CA---T----A---AGGAA---TA
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       464083  9 -    559221 -------------------------------------------T----AA---GGAA---Ca
i Otocyon_megalotis.JAEUCK010005147.1                    I 6 C 0
s Ovis_aries.CM001607.2                                   17587882 25 +  44047080 A---TG-----G----T---TAG-C-AG--CA-G----CA---T----A---AGGAA---TA
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      175874 25 -    191736 A---TG-----G----T---TAG-C-AG--CA-G----CA---T----A---AGGAA---TA
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    47660 21 +     80009 a---ta-----a----t---------ag--cag-----ca---t----a---aggaa---ca
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146522 21 + 189151597 a---ta-----a----t---------ag--cag-----ca---t----a---aggaa---ca
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152690 20 +    230217 A---TG-----A----C---------AG--CA-G----CA---T----A----GGAA---CA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                266001 20 +  18783137 A---TG-----A----C---------AG--CA-G----CA---T----A----GGAA---CA
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4722827 20 -   8748460 A---TG-----A----C---------AG--CA-G----CA---T----A----GGAA---CA
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1266783 25 -   2937107 a---tg-----g----t---TAG-C-AG--CA-G----CA---T----A---AGGAA---TA
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183446739 21 + 183742232 a---ta-----g----t---------ag--CAG-----Ca---c----a---aggaa---ca
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10389 21 +     20448 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567197 21 +  20919399 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   9129 21 +     41871 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12422 21 +     27711 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3421 21 -     11374 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14149 20 -     78924 A---TG-----A----C---------AG--CA--A---CA---T----A----GGAA---TG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18197308 28 -  18517816 G---TA-----A----TA-CC-A-T-AG--CA-GA-AGCG---T----A---GG-AG---CA
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_221660                      426 33 -      2102 A---AA-AATAA----TT-TT-G-T-GA--CA-GT-AACA---T----A---AGAAA---CA
i Petromus_typicus.PetTyp_scaffold_221660                I 261 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              10381 25 +     63832 A---TG-GTTAA----T---------AG--CA-G----CA---T----A---AGGAA---TA
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            1740 21 +     68526 A---TG-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        41886 21 +     89929 A---TG-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43300 21 +     51399 A---TG-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299537 21 -  14605196 a---tg-----g----t---------ag--CAG-----Ca---c----a---aggaa---ca
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3379 23 +     22620 ACCAGA-----A----C---------AG--CA--A---CA---T----A---A-GAA---CA
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pithecia_albicans.k141_1476471                              5185 21 +     26961 G---TA-----A----T---------AG--CAG-----CA---T----A---AGGAA---CA
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1330 21 +     23417 G---TA-----A----T---------AG--CAG-----CA---T----A---AGGAA---CA
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                5177 21 +     29694 G---TA-----A----T---------AG--CAG-----CA---T----A---AGGAA---CA
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          30203 21 +     52772 G---TA-----A----T---------AG--CAG-----CA---T----A---AGGAA---CA
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           5199 21 +     26198 G---TA-----A----T---------AG--CAG-----CA---T----A---AGGAA---CA
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3941747 21 +   4542175 G---TA-----A----T---------AG--CAG-----CA---T----A---AGGAA---CA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            5163 21 -     23490 G---TA-----A----T---------AG--CAG-----CA---T----A---AGGAA---CA
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9419 21 -     39866 G---TA-----A----T---------AG--CAG-----CA---T----A---AGGAA---CA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18585 21 +     34906 G---TA-----A----T---------AG--CAG-----CA---T----A---AGGAA---CA
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       22847 21 +     87950 G---TA-----A----T---------AG--CAG-----CA---T----A---AGGAA---CA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23676 21 +     88961 G---TA-----A----T---------AG--CAG-----CA---T----A---AGGAA---CA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9347 21 +     39403 G---TA-----A----T---------AG--CAG-----CA---T----A---AGGAA---CA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          23128 21 -     87928 G---TA-----A----T---------AG--CAG-----CA---T----A---AGGAA---CA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         30087 21 +     60166 G---TA-----A----T---------AG--CAG-----CA---T----A---AGGAA---CA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30284 21 +     67232 G---TA-----A----T---------AG--CAG-----CA---T----A---AGGAA---CA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          25757 21 +     90634 G---TA-----A----T---------AG--CAG-----CA---T----A---AGGAA---CA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          23129 21 -     89403 G---TA-----A----T---------AG--CAG-----CA---T----A---AGGAA---CA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.NDHI03003595.1                                 5496 22 -     34550 a---ta-----a----t---------ag--cag-----ca---t---aa---aggaa---ca
i Pongo_abelii.NDHI03003595.1                            I 108 I 11
s Pongo_pygmaeus.ctg66                                     9574276 21 +   9816681 A---TA-----A----T---------AG--CAG-----CA---T----A---AGGAA---CA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76840 21 -     81375 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8657 21 +     19060 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            12436 28 -     21651 A---TA-----A----TA-TT-G-T-AC--CA-GA-AGAG---T----A---gg-aa---ca
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            16715 24 -     21811 ACACTA-----A----C---------AA--CA-G----CA---T----A---AGGAA---CA
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteropus_alecto.KB030862.1                              22978357 21 +  28871421 A---TA-----A----C---------AA--CA-----gca---t----a---aagaa---ca
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Puma_concolor.QAVW01001104.1                            20275886 20 -  38429054 A---TG-----A----C---------AG--CA-G----CA---T----A----GGAA---CA
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             18649 21 -     91421 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612772 21 +   7812017 A---TA-----G----T---------AG--CAG-----CC---C----A---AGGAA---CA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18679 21 -     72585 A---TA-----G----T---------AG--CAG-----CC---C----A---AGGAA---CA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  8092 25 +     55207 A---TG-----G----C---TAG-C-AG--CA-G----CA---T----A---AGGAA---TA
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53572683 28 +  90668790 A---TA-----A----TA-CT-A-T-AA--CA-AA-AGTC---T----A---GA-AA---CA
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        368408 21 -   3329780 A---TA-----A----C---------AA--CA-G----CA---T----A---CGTaa---ca
i Rhinolophus_sinicus.LVEH01000134.1                     I 3 C 0
s Rhinopithecus_bieti.k119_217274                            10347 21 -     11128 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239715 21 - 195417433 a---ta-----g----t---------ag--CAG-----Ca---c----a---aggaa---ca
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675362 21 +   7961872 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89429 21 -     96226 A---TA-----A----C---------AA--CA-G----CA---T----A---AAGAA---CA
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154703 21 -    313613 A---TT-----A----T---------AA--CA-G----CG---T----G---AGGAA---CA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                         3521 21 -     12572 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30373 21 +     39453 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           10881 21 +     27826 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10422 21 -     19483 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3720 21 -     12762 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3565 21 +     13763 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     2333 28 -     30804 G---TA-----C----TA-AT-G-C-AG--CA-GA-AGCA---T----A---CG-AG---CA
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Sorex_araneus.JH798187.1                                13652535 21 -  18376816 A---TG-----C----T---------AA--GA-G----TA---G----A---AAGGa---ca
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1955690 29 -   3870691 a---ta-----a----tA-CT-G-T-AA--CA-GA-AGCA---T----A---ACAAA---CA
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              19854 21 -    196729 A---TG-----A----C---------AG--CT-G----CA---T----AA---GGAA---CA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6813226 25 +  69701581 A---TA-----A----T---T-A-ACAG--CA-G----CA---t----a---aggaa---ca
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                12759 23 +     41958 ACGGAA-----A----C---------AA--CA--A---CA---C----A---A-GAA---GA
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73946 22 +    116680 A---TA-----G----T---------AA--AA-G----CA---C----AATTAGAAG-----
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tarsius_lariang.k141_2201908                               27324 21 +     70052 G---TG-----A----C---------AG--CAG-----CA---C----A---AGGAA---CA
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                2121 21 -     16117 G---TG-----A----C---------AG--CAG-----CA---C----A---AAGAA---CA
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186432045 21 + 186847797 a---ta-----g----t---------ag--CAG-----Ca---c----a---aggaa---ca
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              107118 16 +    114563 -------------------------------A-GT-AACA---T----A---AGAAA---CA
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 170 C 0
s Tolypeutes_matacus.TolMat_scaffold_228639                   7668 21 +      8208 A---TG-----A----T---------AAAAAA-G----CA---T----A---AGTAA-----
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     82988 24 +    610378 ACAATA-----A----C---------AA--CA-G----CA---T----A---AAGAA---CA
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         14459 21 -     20410 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3582 21 -     12674 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14567 21 +     19930 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      10969 21 -     19997 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            51111 21 -     60166 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18573 21 -     27529 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                        205 21 +      9229 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          12107 21 -     21137 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                     207 21 +      9131 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                          171 21 -      3730 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28439 21 +     32220 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942536 21 +   6242583 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11789 21 +     20839 A---TA-----G----T---------AG--CAG-----CA---C----A---AGGAA---CA
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    2010 25 +     27266 A---TG-----G----T---TAG-C-AG--CT-G----CA---T----A---AGGAA---TA
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tupaia_chinensis.KB320699.1                              2157681 20 +   4065304 a---ta-----a----t---------aa--ca------ta---c----a---aggag---ca
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_306982                     103 21 -      4186 A---TA-----A----T---------AA--CA-G----TA---C----A---AGGAG---CA
i Tupaia_tana.TupTan_flattened_line_306982               C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15739563 25 +  33153633 A---TG-GTTAA----T---------AG--CA-G----CA---T----A---AGGAA---TA
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54820 21 -     77625 A---TG-----A----T---------AA--CA-G----CG---T----G---AAGAA---CA
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Vicugna_pacos.KN270157.1                                 5373516 25 -   5488506 A---TG-----GTTAAC---------AG--CA-G----CA---T----A---AGGAA---CA
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 12515 21 -     43706 A---TG-----A----C---------AG--TA-G----CA---T----AA---GGAA---CA
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          2675 29 +    224448 A---TA-----A----TA-CT-G-T-AA--CA-GC-AGCA---T----A---ACAAA---CA
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      16352 29 +     63895 A---TG-----A----TG-CC-A-T-CA--CA-GA-AGTA---T----A---AGGGA---CA
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_761354             123 25 -      1267 A---TG-GTTAA----T---------AG--CA-G----CA---T----A---AGGAA---TA
i Ziphius_cavirostris.ZipCav_flattened_line_761354       C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                        67149665 1414 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     8427 743 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T

a score=0.000000
s hg38.chrUn_KI270753v1                                      10335 11 +     62944 A-------AAA-GAAAGAG
s Acinonyx_jubatus.LLWD01001279.1                           828892  8 -   1699592 C-------ACG-GAGA---
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 3
s Acomys_cahirinus.AcoCah_scaffold_12655                     72816  7 +     87051 --------AAG-GGGA---
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 19
s Allactaga_bullata.AllBul_scaffold_9566                     75896  8 -     89534 C-------AAA-GAGA---
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 3
s Allenopithecus_nigroviridis.k141_3361533                   18186 11 -     52922 A-------AAG-GAAAGAG
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         18123 11 -     28001 A-------AAG-GAAAGAG
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8618 11 -     18505 A-------AAG-GAAAGAG
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9471 11 -     12518 A-------AAG-GAAAGAG
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              9928  9 +     51355 A-------AAA-GA--GAG
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                3035  9 -     36483 A-------AAG-GA--GAG
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13488  9 +     28687 A-------AAG-GA--GAG
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 1960  9 +     27940 A-------AAG-GA--GAG
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            3039  9 -      9457 A-------AAG-GA--GAG
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             1997  9 +     30492 A-------AAG-GA--GAG
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              5990 11 +     47717 A-------AAG-GAAAGAG
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              2728  9 +      5663 A-------AAG-GA--GAG
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             17179  9 +     50774 A-------AAG-GA--GAG
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          677623  8 -   2318259 A-------AAG-GAGG---
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 3
s Anoura_caudifer.AnoCau_scaffold_1412                      187169  8 +    412891 A-------AAG-GAGA---
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 3
s Antilocapra_americana.AntAmePen_scaffold_12469            100098  8 -    100397 A-------AAG-GAGG---
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 I 3
s Aplodontia_rufa.AprRuf_scaffold_68852                      14233  8 +     20879 A-------AAG-GAGA---
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 3
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6577  8 +     43469 A-------AAG-GAGA---
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 3
s Ateles_geoffroyi_b.tarseq_1536                             21210191 11 -  21539123 A-------AAG-GAAAGAG
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               44987 11 -     48001 A-------AAG-GAAAGAG
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 27791 11 -     30947 A-------AAG-GAAAGAG
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9563 11 -     89868 A-------AAG-GAAAGAG
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              13947 11 -     40414 A-------AAG-GAAAGAG
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                21836 11 +     72325 A-------AAG-GAAAGAG
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193471  8 +  23207421 A-------AAG-GAGG---
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 3
s Balaenoptera_bonaerensis.DF707048.1                         3936  8 -     18090 A-------AAG-GAGG---
i Balaenoptera_bonaerensis.DF707048.1                    C 0 I 3
s Beatragus_hunteri.BeaHun_scaffold_50177                    28708  8 +     34529 A-------AAG-GAGG---
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 3
s Bison_bison.KN261452.1                                    202710  8 -    288883 A-------AAG-GAGG---
i Bison_bison.KN261452.1                                 C 0 I 3
s Bos_indicus.CM003047.1                                  20275950  8 +  48749331 A-------AAG-GAGG---
i Bos_indicus.CM003047.1                                 C 0 I 3
s Bos_mutus.JH880303.1                                     1128503  8 -   1948126 A-------AAG-GAGG---
i Bos_mutus.JH880303.1                                   C 0 I 3
s Bos_taurus.CM000203.6                                   18086588  8 +  45695690 A-------AAG-GAGG---
i Bos_taurus.CM000203.6                                  C 0 I 3
s Bubalus_bubalis.KI419123.1                               2822548  8 +   4408762 A-------AAG-GAGG---
i Bubalus_bubalis.KI419123.1                             C 0 I 3
s Cacajao_ayresi.k141_552049                                102813 11 -    122966 A-------AAG-GAAAGAG
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   62316 11 +     81800 A-------AAG-GAAACAG
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31498 11 -     95584 A-------AAG-GAAAGAG
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55599 11 -    119600 A-------AAG-GAAAGAG
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10004020  8 -  17673402 A-------AAG-AAGG---
i Camelus_bactrianus.KN276810.1                          C 0 I 3
s Camelus_dromedarius.KN272107.1                           2336492  8 -   7040546 A-------AAG-AAGG---
i Camelus_dromedarius.KN272107.1                         C 0 I 3
s Camelus_ferus.KB017975.1                                  404790  8 -   1652518 A-------AAG-AAGG---
i Camelus_ferus.KB017975.1                               C 0 I 3
s CanFam4.chr16                                           17800917  8 -  60362399 C-------AAG-GAGA---
i CanFam4.chr16                                          C 0 I 5
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     1660  8 -     43241 C-------AAG-GAGA---
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 I 5
s Canis_lupus_dingo.QKWQ01000480.1                         9036360  8 -   9314153 c-------aag-gaga---
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 5
s Canis_lupus_familiaris.chr16                            17960831  8 -  59632846 c-------aag-gaga---
i Canis_lupus_familiaris.chr16                           C 0 I 5
s Canis_lupus_orion.HG994398.1                            18502133  8 +  63665305 c-------aag-gaga---
i Canis_lupus_orion.HG994398.1                           C 0 I 5
s Capra_aegagrus.CM003241.1                               18831729  8 +  46296322 A-------AAG-GAGG---
i Capra_aegagrus.CM003241.1                              C 0 I 3
s Capra_hircus.CM004588.1                                 18062449  8 -  44709034 A-------AAG-GAGG---
i Capra_hircus.CM004588.1                                C 0 I 3
s Capromys_pilorides.CapPil_scaffold_65020                    2818  5 -     12242 A-------A----AGA---
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 23
s Carlito_syrichta.NW_007259797.1                           156851  5 -    496798 c-------aag----a---
i Carlito_syrichta.NW_007259797.1                        C 0 I 2
s Carollia_perspicillata.CarPer_scaffold_92756                6920  8 -     11696 A-------AAG-GAGA---
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 3
s Castor_canadensis.CasCan_scaffold_2074                    138785  8 +    179628 A-------AAG-GAGA---
i Castor_canadensis.CasCan_scaffold_2074                 I 7 I 3
s Catagonus_wagneri.CatWag_scaffold_2839                     95668  7 +    217609 A-------AA--GAGA---
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 3
s Cavia_aperea.AVPZ01000300.1                             18351360  8 -  23392119 A-------AAG-GAGA---
i Cavia_aperea.AVPZ01000300.1                            C 0 I 28
s Cavia_porcellus.DS562891.1                              18363623  8 -  23407841 A-------AAG-GAGA---
i Cavia_porcellus.DS562891.1                             C 0 I 25
s Cavia_tschudii.CavTsc_scaffold_8919                       102505  8 +    143979 A-------AAG-GAGA---
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 I 25
s Cephalopachus_bancanus.k141_1423433                         6350  5 +     31688 C-------AAG----A---
i Cephalopachus_bancanus.k141_1423433                    C 0 I 2
s Cercocebus_atys.KQ010504.1                               4479145 11 +   4669795 a-------aag-gaaagag
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3639 11 +     17872 A-------AAG-GAAAGAG
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4234 11 -     14043 A-------AAG-GAAAGAG
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12329 11 +     27781 A-------AAG-GAAAGAG
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12483 11 -     20310 A-------AAG-GAAAGAG
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15459 11 +     29689 A-------AAG-GAAAGAG
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10219 11 -     20078 A-------AAG-GAAAGAG
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          18134 11 -     27936 A-------AAG-GAAAGAG
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            7005 11 -     17152 A-------AAG-GAAAGAG
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826729 11 +  39242232 A-------AAG-GAAAGAG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226237 11 -  21565898 A-------AAG-GAAAGAG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43356 11 -     53127 A-------AAG-GAAAGAG
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3606 11 +     13442 A-------AAG-GAAAGAG
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       18152 11 -     27947 A-------AAG-GAAAGAG
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1181 11 +     10558 A-------AAG-GAAAGAG
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4186 11 +     14005 A-------AAG-GAAAGAG
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1796 15 -      8501 AGGAACAAAAG-AAGA---
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 I 3
s Cheracebus_lucifer.k141_49986                               1417 11 -     17098 A-------AAG-GAAAGAG
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1293 11 +     17877 A-------AAG-GAAAGAG
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            158860 11 -    216457 A-------AAG-GAAAGAG
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63335 11 +     76511 A-------AAG-GAAAGAG
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254463  8 +   2543920 a-------aag-gaga---
i Chinchilla_lanigera.JH722012.1                         C 0 I 23
s Chiropotes_israelita.k141_747660                           99943 11 +    146308 A-------AAG-GAAAGAG
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          31750 11 -     50570 A-------AAG-GAAAGAG
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18432056 11 -  18827391 A-------AAG-GAAAGAG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18553 11 -     50209 A-------AAG-GAAAGAG
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425557 11 + 135778131 a-------aag-gaaagag
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1914058 11 +   2368649 a-------aag-gaaagag
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952306 11 + 200372422 A-------AAG-GAAAGAG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40579 11 +     84244 A-------AAG-GAAAGAG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549582  9 -  53390261 A-------AAAGGGGG---
i Condylura_cristata.JH655891.1                          C 0 I 3
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1932  8 +     23735 C-------AAG-AAGA---
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 I 5
s Cricetomys_gambianus.CriGam_scaffold_18520                 52071  7 +     63868 --------AAA-GGGA---
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 25
s Crocidura_indochinensis.CroInd_scaffold_37019               4334  8 -     19598 A-------AAC-AAGA---
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 I 2
s Cryptoprocta_ferox.CryFer_flattened_line_16129             30074  8 -     87169 T-------AAG-GAGA---
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 3
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37747  5 +     51376 G-------A----AGA---
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 23
s Dasyprocta_punctata.DasPun_flattened_line_15900             1437  8 -     75252 A-------AAG-GAGA---
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 23
s Dasypus_novemcinctus.JH564415.1                            64815 15 +   2246927 AGGAACAAAAg-gaca---
i Dasypus_novemcinctus.JH564415.1                        C 0 I 3
s Delphinapterus_leucas.KZ290073.1                        16813102  8 +  35494412 A-------AAG-GAGG---
i Delphinapterus_leucas.KZ290073.1                       C 0 I 239
s Desmodus_rotundus.KZ672289.1                             8631921  8 +  20541912 g-------aag-gaaa---
i Desmodus_rotundus.KZ672289.1                           C 0 I 3
s Dinomys_branickii.DinBra_scaffold_21862                    37946  8 +     67921 A-------AAG-GAGA---
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 23
s Dolichotis_patagonum.DolPat_scaffold_30833                 35077  8 -     42551 A-------AAG-GAGA---
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 I 23
s Eidolon_helvum.AWHC01278734.1                                129  8 +      2334 A-------AAG-GTAA---
i Eidolon_helvum.AWHC01278734.1                          C 0 I 3
s Elaphurus_davidianus.JRFZ01104969.1                       313496  8 +    607251 A-------AAG-GAGG---
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 3
s Ellobius_lutescens.LOEQ01008920.1                          22577  3 -    110024 --------AAG--------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 20
s Ellobius_talpinus.LOJH01081419.1                            2497  3 +      8657 --------AAG--------
i Ellobius_talpinus.LOJH01081419.1                       C 0 I 20
s Eptesicus_fuscus.JH977646.1                              2148633  8 -  14770903 a-------aag-gaga---
i Eptesicus_fuscus.JH977646.1                            C 0 I 3
s Erythrocebus_patas.Contig38                             21208729 11 -  21539334 A-------AAG-GAAAGAG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12784  8 +    133382 A-------AAG-GAGG---
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 3
s Eubalaena_japonica.EubJap_flattened_line_31514             26730  8 -     44125 A-------AAG-GAGG---
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 I 3
s Felis_catus.CM001381.2                                  20238636  8 + 206538554 C-------ACG-GAGA---
i Felis_catus.CM001381.2                                 C 0 I 3
s Felis_catus_fca126.CM031415.1                           20197511  8 + 205367284 C-------ACG-GAGA---
i Felis_catus_fca126.CM031415.1                          C 0 I 3
s Felis_nigripes.FelNig_flattened_line_20823                 11171  8 -     36744 C-------AGG-GAGA---
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 3
s Fukomys_damarensis.KN121974.1                             852130  1 +   3816255 a------------------
i Fukomys_damarensis.KN121974.1                          C 0 I 7
s Galeopterus_variegatus.GalVar_scaffold_108840               3909  8 -      9135 A-------AAG-GAAA---
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 I 3
s Giraffa_tippelskirchi.LVKQ01S007888.1                     610741  8 -    660261 A-------AAG-GAGG---
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 I 3
s Glis_glis.GliGli_scaffold_19807                            32883  8 +     49224 A-------AAT-GAGA---
i Glis_glis.GliGli_scaffold_19807                        C 0 I 3
s Gorilla_beringei.k141_3596273                              19580 11 -     32273 A-------AAA-GAAAGAG
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341716 11 + 186649187 a-------aaa-gaaagag
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   34900  8 +     78134 A-------AAG-GAGA---
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 3
s Helogale_parvula.HelPar_flattened_line_2585               243882  8 +    327341 C-------AAG-GAGA---
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 3
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 19945  8 +     36099 A-------AAG-GAGG---
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 I 3
s Heterocephalus_glaber.JH602082.1                        20663763  1 +  22651954 A------------------
i Heterocephalus_glaber.JH602082.1                       C 0 I 7
s Hipposideros_armiger.JXIK01000431.1                       111975  4 +   1711038 a-------aa-----a---
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 3
s Hipposideros_galeritus.HipGal_scaffold_101188                541  4 +      9903 A-------AA-----A---
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 I 3
s Hoolock_leuconedys.ctg274                                    438374 11 +    630532 A-------AAA-GAAAGAG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46619  8 +     55795 C-------AAG-GAGA---
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 3
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23411  8 -    143317 A-------AAG-GAGA---
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 23
s Hystrix_cristata.HysCri_scaffold_5660                      84662  8 +    135385 A-------AAC-GAGG---
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 3
s Ictidomys_tridecemlineatus.JH393364.1                    7522573  8 -   7955117 A-------AAG-GAGA---
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 3
s Inia_geoffrensis.IniGeo_flattened_line_34779                 338  8 -     31341 A-------AAG-GAGG---
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 I 224
s Jaculus_jaculus.JH725527.1                               8278645  8 -   9596543 C-------AAA-GAGA---
i Jaculus_jaculus.JH725527.1                             C 0 I 3
s Kogia_breviceps.KogBre_flattened_line_81059                  308  8 -     18011 A-------AAG-GAGG---
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 I 3
s Lagothrix_lagothricha.k141_1005387                         15995 11 -     38430 A-------AAG-GAAAGAG
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    18278  8 -     42476 A-------AAG-GAGA---
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 68
s Lipotes_vexillifer.KE559953.1                             269370  9 -    662738 A--A----AAG-GAGG---
i Lipotes_vexillifer.KE559953.1                          C 0 I 242
s Lophocebus_aterrimus.ctg367                              1440687 11 +   1826925 A-------AAG-GAAAGAG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17957071  8 -  59628241 c-------aag-gaga---
i Lycaon_pictus.CM007581.1                               C 0 I 5
s Macaca_arctoides.k141_2326796                              10497 11 +     40492 A-------AAG-GAAAGAG
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679751 11 +  60120075 A-------AAG-GAAAGAG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16268 11 -     26193 A-------AAG-GAAAGAG
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            84044 11 -    114318 A-------AAG-GAAAGAG
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9735 11 -     23192 A-------AAG-GAAAGAG
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19199 11 -     29190 A-------AAG-GAAAGAG
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27777 11 +     37952 A-------AAG-GAAAGAG
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842854 11 + 187317192 a-------aag-gaaagag
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461432 11 -  25927173 a-------aag-gaaagag
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83633 11 +     89720 A-------AAG-GAAAGAG
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10626 11 +     20474 A-------AAG-GAAAGAG
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10423 11 -     14993 A-------AAG-GAAAGAG
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333285 11 -    668171 A-------AAG-GAAAGAG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8735 11 -     24072 A-------AAG-GAAAGAG
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29366 11 -     45290 A-------AAG-GAAAGAG
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92296  8 +     94391 A-------AAG-GTAA---
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 6 I 3
s Mandrillus_leucophaeus.scaffold280                      23940954 11 -  24302211 A-------AAG-GAAAGAG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355070 11 +    752769 A-------AAG-GAAAGAG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              20281  8 +    737560 a-------aaa-gagt---
i Manis_javanica.JSZB01003497.1                          I 501 I 3
s Manis_pentadactyla.KN006162.1                              52425  8 -    317179 a-------aaa-gagt---
i Manis_pentadactyla.KN006162.1                          I 627 I 3
s Marmota_marmota.CZRN01000018.1                          33104852  8 -  40650429 A-------AAG-GAGA---
i Marmota_marmota.CZRN01000018.1                         C 0 I 3
s Megaderma_lyra.MegLyr_scaffold_4542                        14785  8 -    207569 A-------AAG-AAGA---
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 3
s Meriones_unguiculatus.MerUng_scaffold_7390                 34823  7 +    140813 --------AAG-GAGA---
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 30
s Mesocricetus_auratus.KB708134.1                         12184281  3 -  29670104 --------aag--------
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    4993  8 +     10310 A-------AAG-GAGG---
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 I 3
s Micronycteris_hirsuta.MicHir_scaffold_52381                17667  8 -     19307 A-------AAG-GAGA---
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 3
s Microtus_ochrogaster.CM001695.1                         11262558  3 -  27267610 --------AAG--------
i Microtus_ochrogaster.CM001695.1                        C 0 I 20
s Miniopterus_natalensis.LDJU01000034.1                    1851863  8 +   8254450 a-------gag-gaga---
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 3
s Miniopterus_schreibersii.MinSch_scaffold_18080             35547  8 +     64694 A-------GAG-GAGA---
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 3
s Miopithecus_ogouensis.k141_534055                          12634 11 -     28506 A-------AAG-GAAAGAG
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    28485  8 -    437263 A-------AAG-GAGG---
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 239
s Mormoops_blainvillei.MorMeg_scaffold_1417                 143259  8 -    366855 A-------AAG-GAGA---
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 3
s Moschus_moschiferus.MosMos_scaffold_13123                   2782  8 +     82753 A-------AAG-GAGG---
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 3
s Murina_feae.MurFea_scaffold_85699                           8597  8 +     14753 A-------AAG-GAGA---
i Murina_feae.MurFea_scaffold_85699                      C 0 I 3
s Mus_caroli.LT608237.1                                   84363211  7 - 120012414 --------AAG-AGGA---
i Mus_caroli.LT608237.1                                  C 0 I 33
s Mus_musculus.chr8                                       87652711  7 - 129401213 --------AAG-AGGA---
i Mus_musculus.chr8                                      C 0 I 33
s Mus_pahari.LT608297.1                                   31357445  7 -  89631738 --------AAG-AGGA---
i Mus_pahari.LT608297.1                                  C 0 I 27
s Mus_spretus.CM004101.1                                  90755200  7 - 130317789 --------AAG-AGGA---
i Mus_spretus.CM004101.1                                 C 0 I 33
s Muscardinus_avellanarius.MusAve_scaffold_82313              6403  8 +     14296 G-------AAG-GAGA---
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 6
s Myocastor_coypus.MyoCoy_scaffold_10123                     73008  5 -     80779 G-------A----AGA---
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 I 23
s Myotis_brandtii.KE162005.1                                282338  8 -  10118263 a-------aag-gaga---
i Myotis_brandtii.KE162005.1                             C 0 I 3
s Myotis_davidii.KB100139.1                                1589650  8 -   6019432 a-------aat-gaga---
i Myotis_davidii.KB100139.1                              C 0 I 3
s Myotis_lucifugus.GL429869.1                              3905770  8 -   4330536 a-------aag-gaga---
i Myotis_lucifugus.GL429869.1                            C 0 I 3
s Myotis_myotis.MyoMyo_scaffold_1392844                        169  8 +       242 A-------AAG-GAGA---
i Myotis_myotis.MyoMyo_scaffold_1392844                  C 0 I 3
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190583  8 +    196477 A-------AAA-AAGA---
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           C 0 I 7
s Nannospalax_galili.KL204047.1                            2037002  7 -   3037898 --------AAA-GGAG---
i Nannospalax_galili.KL204047.1                          C 0 I 25
s Nasalis_larvatus.k141_413338                               18684 11 +     21681 A-------AAG-GAAAGAG
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5867449  8 +   7148211 A-------AAG-GAGG---
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 239
s Noctilio_leporinus.NocLep_scaffold_251                    759444  8 +    783361 A-------AAG-GAGA---
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 3
s Nyctereutes_procyonoides.CAJHUB010000658.1               9151008  8 -   9404916 c-------aag-gaga---
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 5
s Ochotona_princeps.JH802162.1                             1365873  8 +   3988456 A-------AAG-GAAA---
i Ochotona_princeps.JH802162.1                           C 0 I 3
s Odocoileus_virginianus.KZ100018.1                         146286  8 +    630418 A-------AAG-GAGG---
i Odocoileus_virginianus.KZ100018.1                      C 0 I 3
s Okapia_johnstoni.LVCL01S0005463.1                          78642  8 -    150152 A-------AAG-GAGG---
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 3
s Ondatra_zibethicus.OndZib_scaffold_46174                   27218  3 +     28053 --------AAG--------
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 20
s Orcinus_orca.KB316932.1                                  2783350  8 -  10937097 A-------AAG-GAGG---
i Orcinus_orca.KB316932.1                                C 0 I 239
s Otocyon_megalotis.JAEUCK010005147.1                       464092  8 -    559221 c-------aag-gaga---
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 5
s Ovis_aries.CM001607.2                                   17587907  8 +  44047080 A-------AAG-GAGG---
i Ovis_aries.CM001607.2                                  C 0 I 3
s Ovis_canadensis.OviCan_scaffold_2572                      175899  8 -    191736 A-------AAG-GAGG---
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 I 3
s Pan_paniscus.KQ411613.1                                    47681 11 +     80009 a-------aaa-gaaagag
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146543 11 + 189151597 a-------aaa-gaaagag
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152710  8 +    230217 C-------AAG-GAGA---
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 3
s Panthera_pardus.KV860321.1                                266021  8 +  18783137 C-------AAG-GAGA---
i Panthera_pardus.KV860321.1                             C 0 I 3
s Panthera_tigris.KE722367.1                               4722847  8 -   8748460 C-------AAG-GAGA---
i Panthera_tigris.KE722367.1                             C 0 I 3
s Pantholops_hodgsonii.KE114653.1                          1266808  8 -   2937107 A-------AAG-GTGG---
i Pantholops_hodgsonii.KE114653.1                        C 0 I 3
s Papio_anubis.CM001495.2                                183446760 11 + 183742232 a-------aag-gaaagag
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10410 11 +     20448 A-------AAG-GAAAGAG
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567218 11 +  20919399 A-------AAG-GAAAGAG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   9150 11 +     41871 A-------AAG-GAAAGAG
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12443 11 +     27711 A-------AAG-GAAAGAG
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3442 11 -     11374 A-------AAG-GAAAGAG
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14169  8 -     78924 C-------AAA-GAGA---
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 13
s Peromyscus_maniculatus.KI615324.1                       18197336  3 -  18517816 --------AAG--------
i Peromyscus_maniculatus.KI615324.1                      C 0 I 34
s Petromus_typicus.PetTyp_scaffold_221660                      459  8 -      2102 A-------AAG-GAGA---
i Petromus_typicus.PetTyp_scaffold_221660                C 0 I 23
s Phocoena_phocoena.PhoPho_flattened_line_24159              10406  8 +     63832 A-------AAG-GAGG---
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 243
s Piliocolobus_badius.k141_1142974                            1761 11 +     68526 A-------AAG-GAAAGAG
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        41907 11 +     89929 A-------AAG-GAAAGAG
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43321 11 +     51399 A-------AAG-GAAAGAG
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299558 11 -  14605196 a-------aag-gaaagag
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3402  8 +     22620 A-------AAG-GAAA---
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 3
s Pithecia_albicans.k141_1476471                              5206 11 +     26961 A-------AAG-GAAAGAG
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1351 11 +     23417 A-------AGG-GAAAGAG
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                5198 11 +     29694 A-------AAG-GAAAGAG
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          30224 11 +     52772 A-------AAG-GAAAGAG
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           5220 11 +     26198 A-------AAG-GAAAGAG
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3941768 11 +   4542175 A-------AAG-GAAAGAG
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            5184 11 -     23490 A-------AAG-GAAAGAG
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9440 11 -     39866 A-------AAG-GAAAGAG
i Plecturocebus_bernhardi.k141_2549090                   C 0 I 2
s Plecturocebus_brunneus.k141_1495506                        18606 11 +     34906 A-------AAG-GAAAGAG
i Plecturocebus_brunneus.k141_1495506                    C 0 I 2
s Plecturocebus_caligatus.k141_1382851                       22868 11 +     87950 A-------AAG-GAAAGAG
i Plecturocebus_caligatus.k141_1382851                   C 0 I 2
s Plecturocebus_cinerascens.k141_1164729                     23697 11 +     88961 A-------AAG-GAAAGAG
i Plecturocebus_cinerascens.k141_1164729                 C 0 I 2
s Plecturocebus_cupreus.k141_2351393                          9368 11 +     39403 A-------AAG-GAAAGAG
i Plecturocebus_cupreus.k141_2351393                     C 0 I 2
s Plecturocebus_dubius.k141_1058799                          23149 11 -     87928 A-------AAG-GAAAGAG
i Plecturocebus_dubius.k141_1058799                      C 0 I 2
s Plecturocebus_grovesi.k141_2013005                         30108 11 +     60166 A-------AAG-GAAAGAG
i Plecturocebus_grovesi.k141_2013005                     C 0 I 2
s Plecturocebus_hoffmannsi.k141_3303950                      30305 11 +     67232 A-------AAG-GAAAGAG
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 I 2
s Plecturocebus_miltoni.k141_349282                          25778 11 +     90634 A-------AAG-GAAAGAG
i Plecturocebus_miltoni.k141_349282                      C 0 I 2
s Plecturocebus_moloch.k141_1031110                          23150 11 -     89403 A-------AAG-GAAAGAG
i Plecturocebus_moloch.k141_1031110                      C 0 I 2
s Pongo_abelii.CM009266.2                                189134688 11 + 189387572 a-------aaa-gaaagag
i Pongo_abelii.CM009266.2                                I 21 I 56
s Pongo_pygmaeus.ctg66                                     9574297 11 +   9816681 A-------AAA-GAAAGAG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76861 11 -     81375 A-------AAG-GAAAGAG
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8678 11 +     19060 A-------AAG-GAAAGAG
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            12464  7 -     21651 --------aag-gaga---
i Psammomys_obesus.NESX01036370.1                        C 0 I 30
s Pteronotus_parnellii.KE909381.1                            16739  8 -     21811 A-------AAG-GAGA---
i Pteronotus_parnellii.KE909381.1                        C 0 I 3
s Pteropus_alecto.KB030862.1                              22978378  8 +  28871421 a-------aaa-gtaa---
i Pteropus_alecto.KB030862.1                             C 0 I 3
s Puma_concolor.QAVW01001104.1                            20275906  8 -  38429054 C-------ACG-GAGA---
i Puma_concolor.QAVW01001104.1                           C 0 I 3
s Pygathrix_cinerea.k141_1153803                             18670 11 -     91421 A-------AAG-GAAAGAG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612793 11 +   7812017 A-------AAG-GAAAGAG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18700 11 -     72585 A-------AAG-GAAAGAG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  8117  8 +     55207 A-------AAG-GAGG---
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 3
s Rattus_norvegicus.chr16                                 53572711  7 +  90668790 --------CGG-AGGA---
i Rattus_norvegicus.chr16                                C 0 I 33
s Rhinolophus_sinicus.LVEH01000134.1                        368429  4 -   3329780 a-------ag-----a---
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 3
s Rhinopithecus_bieti.k119_217274                            10368 11 -     11128 A-------AAG-GAAAGAG
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239736 11 - 195417433 a-------aag-gaaagag
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675383 11 +   7961872 A-------AAG-GAAAGAG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89450  8 -     96226 A-------AAG-GCAA---
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 3
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154724  8 -    313613 A-------AAA-GAGG---
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 3
s Semnopithecus_entellus.k141_1672505                         3542 11 -     12572 A-------AAG-GGAAGAG
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30394 11 +     39453 A-------AAG-GGAAGAG
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           10902 11 +     27826 A-------AAG-GGAAGAG
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10443 11 -     19483 A-------AAG-GGAAGAG
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3741 11 -     12762 A-------AAG-GGAAGAG
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3586 11 +     13763 A-------AAG-GGAAAAG
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     2361  3 -     30804 --------AAG--------
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 I 32
s Sorex_araneus.JH798187.1                                13652556  8 -  18376816 a-------att-gaga---
i Sorex_araneus.JH798187.1                               C 0 I 3
s Spermophilus_dauricus.KZ294078.1                         1955719  8 -   3870691 A-------AAG-GAGA---
i Spermophilus_dauricus.KZ294078.1                       C 0 I 3
s Suricata_suricatta.SurSur_flattened_line_6629              19875  8 -    196729 C-------AAG-GAGA---
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 3
s Sus_scrofa.CM000828.4                                    6813251  7 +  69701581 a-------aa--gaga---
i Sus_scrofa.CM000828.4                                  C 0 I 3
s Tadarida_brasiliensis.TadBra_scaffold_25820                12782  8 +     41958 A-------AAG-GAGA---
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 3
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73968  8 +    116680 A-------AAA-AAGA---
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 I 7
s Tarsius_lariang.k141_2201908                               27345  5 +     70052 C-------AAG----A---
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                2142  5 -     16117 C-------AAG----A---
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186432066 11 + 186847797 a-------aag-gaaagag
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              107134  8 +    114563 A-------AAG-GGGA---
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 23
s Tolypeutes_matacus.TolMat_scaffold_228639                   7689 15 +      8208 AGGAACAAAAG-GAGA---
i Tolypeutes_matacus.TolMat_scaffold_228639              C 0 I 3
s Tonatia_saurophila.TonSau_scaffold_294                     83012  8 +    610378 A-------AAG-GAGA---
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 3
s Trachypithecus_auratus.k141_722599                         14480 11 -     20410 A-------AAG-GGAAGAG
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3603 11 -     12674 A-------AAG-GGAAGAG
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14588 11 +     19930 A-------AAG-GGAAGAG
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      10990 11 -     19997 A-------AAG-GGAAGAG
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            51132 11 -     60166 A-------AAG-GGAAGAG
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18594 11 -     27529 A-------AAG-GGAAGAG
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                        226 11 +      9229 A-------AAG-GGAAGAG
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          12128 11 -     21137 A-------AAG-GGAAGAG
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                     228 11 +      9131 A-------AAG-GGAAGAG
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                          192 11 -      3730 A-------AAG-GGAAGAG
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28460 11 +     32220 A-------AAG-GGAAGAG
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942557 11 +   6242583 A-------AAG-GGAAGAG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11810 11 +     20839 A-------AAG-GGAAGAG
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    2035  8 +     27266 A-------AAG-GAGA---
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 I 3
s Tupaia_chinensis.KB320699.1                              2157701  8 +   4065304 a-------gag-gaaa---
i Tupaia_chinensis.KB320699.1                            C 0 I 27
s Tupaia_tana.TupTan_flattened_line_306982                     124  8 -      4186 A-------GAG-AAAA---
i Tupaia_tana.TupTan_flattened_line_306982               C 0 I 27
s Tursiops_truncatus.MRVK01000835.1                       15739588  8 +  33153633 A-------AAG-GAGG---
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 252
s Uropsilus_gracilis.UroGra_scaffold_12083                   54841  8 -     77625 A-------AAG-GAGG---
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 27
s Vicugna_pacos.KN270157.1                                 5373541  8 -   5488506 A-------AAG-AAGG---
i Vicugna_pacos.KN270157.1                               C 0 I 3
s Vulpes_lagopus.VulLag_flattened_line_30954                 12536  8 -     43706 C-------AAG-GAGA---
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 5
s Xerus_inauris.XerIna_scaffold_2302                          2704  8 +    224448 A-------AAG-GAGA---
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 3
s Zapus_hudsonius.ZapHud_scaffold_11398                      16381  8 +     63895 C-------AAG-GAGA---
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 3
s Ziphius_cavirostris.ZipCav_flattened_line_761354             148  8 -      1267 A-------AAG-GAGG---
i Ziphius_cavirostris.ZipCav_flattened_line_761354       C 0 I 3
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                        67149665 1414 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Onychomys_torridus.OnyTor_scaffold_2986                    82703  0 +    102263 C
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Octodon_degus.JH651603.1                                  749216 44 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     8427 743 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T

a score=0.000000
s hg38.chrUn_KI270753v1                                      10346 56 +     62944 TG-T-G----T--------------AAA-C---AAG-T-G-GA-ACTAC--T----G-G------AAGCTGTCC-----------A-----------------------AGATA----ACGTCCCACATCCTAC------C
s Acinonyx_jubatus.LLWD01001279.1                           828903 59 -   1699592 TG-G-G----T--------------AAA-GGA-AAC-C-A-GG-ACAAT--T----G-G------CA-------G-CT--Gtgt-g--------------agaaaatttaaata----agttcCTA--------------C
i Acinonyx_jubatus.LLWD01001279.1                        I 3 I 8
s Acomys_cahirinus.AcoCah_scaffold_12655                     72842 34 +     87051 ----------------------------------------------------------C------AG-------------G--C-ATCTGTG--TAAGC-AT-C-----CTATA----CCTCCTCA--------------C
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 19 I 8
s Allactaga_bullata.AllBul_scaffold_9566                     75907 17 -     89534 TA-GTG----A--------------ACC-C-A-GAC-A-G-G---------------------------------------------------------------------------------------------------
i Allactaga_bullata.AllBul_scaffold_9566                 I 3 I 121
s Allenopithecus_nigroviridis.k141_3361533                   18197 65 -     52922 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATG----ACTTCCCACATCCTAC------C
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         18134 65 -     28001 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATG----ACTTCCCACATCCTAC------C
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8629 65 -     18505 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATG----ACTTCCCACATCCTAC------C
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9482 65 -     12518 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATG----ACTTCCCACATCCTAC------C
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                              9937 66 +     51355 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGGTGTAC-----------A---G-GAGT----G---C----GAGGTC----ACTTCCCACCTCCTAC------C
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                3044 66 -     36483 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGGTGTAC-----------A---G-GAGT----G---C----GAGGTC----ACTTCCCACCTCCTAC------C
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13497 66 +     28687 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGGTGTAC-----------A---G-GAGT----G---C----GAGGTC----ACTTCCCACCTCCTAC------C
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 1969 66 +     27940 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGGTGTAC-----------A---G-GAGT----G---C----GAGGTC----ACTTCCCACCTCCTAC------C
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            3048 66 -      9457 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGGTGTAC-----------A---G-GAGT----G---C----GAGGTC----ACTTCCCACCTCCTAC------C
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             2006 66 +     30492 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGGTGTAC-----------A---G-GAGT----G---C----GAGGTC----ACTTCCCACCTCCTAC------C
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              6001 66 +     47717 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACCAC--T----G-G------CAGGTGTAC-----------A---G-GAGT----G---C----GAGGTC----ACTTCCCACCTCCTAC------C
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              2737 66 +      5663 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGGTGTAC-----------A---G-GAGT----G---C----GAGGTC----ACTTCCCACCTCCTAC------C
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             17188 66 +     50774 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGGTGTAC-----------A---G-GAGT----G---C----GAGGTC----ACTTCCCACCTCCTAC------C
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          677634 60 -   2318259 CA-A-G----G--------------AAA-CCA-CAC-TTG-GG-ACTGC--T----G-G------CA-------G-CT--GCAT-G------A-TA---G-TA--T-TTAAACA----ATTTCCCA--------------C
i Ammotragus_lervia.NIVO01071767.1                       I 3 I 8
s Anoura_caudifer.AnoCau_scaffold_1412                      187180 59 +    412891 TG-G-A----A--------------AAA-CCA-CAC-T-G-GG-GTGAC--T----G-G------CA-------G-CT--GTGT-G--AG-G-GTAT--G---C-----AAACA----AGTTCCTC--------------C
i Anoura_caudifer.AnoCau_scaffold_1412                   I 3 I 8
s Antilocapra_americana.AntAmePen_scaffold_12469            100109 60 -    100397 CA-A-G----G--------------AAA-CCA-CAC-TTG-GG-ACCAC--T----G-G------CA-------G-CT--GCAT-GAC----AGTAT----T---T---AAACA----ATTTCCCT--------------C
i Antilocapra_americana.AntAmePen_scaffold_12469         I 3 I 8
s Aplodontia_rufa.AprRuf_scaffold_68852                      14244 57 +     20879 CA-G-G----G--------------AAC-C-A-AAC-T-G-GA-ACTAC--T----G-G------CT-------G-CT--AAGT-A---G-GA--A-C--A--C-T---AAATG----ATTTTCCA--------------C
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 3 I 8
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6588 58 +     43469 TG-G-A----A--------------A-A-CCA-CTC-T-G-GG-GTGAT--T----G-G------CA-------G-CCCTG--T-G--AG-G-GT--C---T---TC--GAACA----AGTTCCTC--------------C
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 3 I 8
s Ateles_geoffroyi_b.tarseq_1536                             21210202 66 -  21539123 TG-T-G----G--------------AAA-CAA-AAG-C-G-GA-ACTAC--T----G-G------CAGGTGTGC-----------A---G-GAGT----G---C-T---AGGTC----ACTTCCCACCTCCTAC------C
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               44998 66 -     48001 TG-T-G----G--------------AAA-CAA-AAG-C-A-GA-ACTAC--T----G-G------CAGGTGTGC-----------A---G-GAGT----G---C-T---AGGTC----ACTTCCCACCTCCTAC------C
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 27802 66 -     30947 TG-T-G----G--------------AAA-CAA-AAG-C-G-GA-ACTAC--T----G-G------CAGGTGTGC-----------A---G-GAGT----G---C-T---AGGTC----ACTTCCCACCTCCTAC------C
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9574 66 -     89868 TG-T-G----G--------------AAA-CAA-AAG-C-G-GA-ACTAC--T----G-G------CAGGTGTGC-----------A---G-GAGT----G---C-T---AGGTC----ACTTCCCACCTCCTAC------C
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              13958 66 -     40414 TG-T-G----G--------------AAA-CAA-AAG-C-G-GA-ACTAC--T----G-G------CAGGTGTGC-----------A---G-GAGT----G---C-T---AGGTC----ACTTCCCACCTCCTAC------C
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                21847 66 +     72325 TG-T-G----G--------------AAA-CAA-AAG-C-G-GA-ACTAC--T----G-G------CAGGTGTGC-----------A---G-GAGT----G---C-T---AGGTC----ACTTCCCACCTCCTAC------C
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193482 60 +  23207421 CA-A-G----G--------------AAA-CCA-AAC-TTG-GG-ACTAT--T----G-G------CA-------G-CT--GCAT-GAC----AGTAT----T---T---AAACA----Atttccca--------------c
i Balaenoptera_acutorostrata.KI537508.1                  I 3 I 8
s Balaenoptera_bonaerensis.DF707048.1                         3947 60 -     18090 CA-A-G----G--------------AAA-CCA-AAC-TTG-GG-ACTAT--T----G-G------CA-------G-CT--GCAT-GAC----AGTAT----T---T---AAACA----atttccca--------------c
i Balaenoptera_bonaerensis.DF707048.1                    I 3 I 8
s Beatragus_hunteri.BeaHun_scaffold_50177                    28719 60 +     34529 CA-A-G----G--------------AAA-CCA-CAC-TTG-GG-ACTGC--T----G-G------CA-------G-CT--GCAT-G---GT-AGTAT----T---T---AAACA----ATTTCCCA--------------C
i Beatragus_hunteri.BeaHun_scaffold_50177                I 3 I 8
s Bison_bison.KN261452.1                                    202721 60 -    288883 CA-A-G----G--------------AAA-CCA-CAC-TTG-GG-ACCGC--T----G-G------CA-------G-CT--GCAT-G------A-TA---G-TA--T-TTAAACA----ATTTCCCA--------------C
i Bison_bison.KN261452.1                                 I 3 I 8
s Bos_indicus.CM003047.1                                  20275961 60 +  48749331 CA-A-G----G--------------AAA-CCA-CAC-TTG-GG-ACCGC--T----G-G------CA-------G-CT--GCAT-G------A-TA---G-TA--T-TTAAACA----ATTTCCCA--------------C
i Bos_indicus.CM003047.1                                 I 3 I 8
s Bos_mutus.JH880303.1                                     1128514 60 -   1948126 CA-A-G----G--------------AAA-CCA-CAC-TTG-GG-ACCGC--T----G-G------CA-------G-CT--GCAT-G------A-TA---G-TA--T-TTAAACA----ATTTCCCA--------------C
i Bos_mutus.JH880303.1                                   I 3 I 8
s Bos_taurus.CM000203.6                                   18086599 60 +  45695690 CA-A-G----G--------------AAA-CCA-CAC-TTG-GG-ACCGC--T----G-G------CA-------G-CT--GCAT-G------A-TA---G-TA--T-TTAAACA----ATTTCCCA--------------C
i Bos_taurus.CM000203.6                                  I 3 I 8
s Bubalus_bubalis.KI419123.1                               2822559 60 +   4408762 CA-A-G----G--------------GTG-CCA-CAC-TTG-GC-ACCAC--T----G-G------CA-------G-CT--GCAT-G------A-TA---G-TA--T-TTAAACA----ATTTCCCA--------------C
i Bubalus_bubalis.KI419123.1                             I 3 I 8
s Cacajao_ayresi.k141_552049                                102824 66 -    122966 TG-T-G----G--------------AAA-CAA-AAG-C-G-GA-ACTAC--T----G-G------CAGGTGTAC-----------G---G-GAGT----G---C-T---AGGTC----ACTTCCCACCTCCTAC------C
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   62327 66 +     81800 TG-T-G----G--------------AAA-CAA-AAG-C-G-GA-ACTAC--T----G-G------CAGGTGTAT-----------G---G-GAGT----G---C-T---AGGTC----ACTTCCCACCTCCTAC------C
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31509 66 -     95584 TG-T-G----G--------------AAA-CAA-AAG-C-G-GA-ACTAC--T----G-G------CAGGTGTAC-----------G---G-GAGT----G---C-T---AGGTC----ACTTCCCACCTCCTAC------C
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55610 66 -    119600 TG-T-G----G--------------AAA-CAA-AAG-C-G-GA-ACTAC--T----G-G------CAGGTGTAT-----------G---G-GAGT----G---C-T---AGGTC----ACTTCCCACCTCCTAC------C
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10004031 60 -  17673402 CA-A-G----G--------------AAA-CCA-GAC-TTG-GG-ACTAC--T----G-G------CA-------G-CT--GTAT-GAC----AGTAT----T---T---AAACA----atttccca--------------c
i Camelus_bactrianus.KN276810.1                          I 3 I 8
s Camelus_dromedarius.KN272107.1                           2336503 60 -   7040546 CA-A-G----G--------------AAA-CCA-GAC-TTG-GG-ACTAC--T----G-G------CA-------G-CT--GTAT-GAC----AGTAT----T---T---AAACA----atttccca--------------c
i Camelus_dromedarius.KN272107.1                         I 3 I 8
s Camelus_ferus.KB017975.1                                  404801 60 -   1652518 CA-A-G----G--------------AAA-CCA-GAC-TTG-GG-ACTAC--T----G-G------CA-------G-CT--GTAT-GAC----AGTAT----T---T---AAACA----atttccca--------------c
i Camelus_ferus.KB017975.1                               I 3 I 8
s CanFam4.chr16                                           17800930 56 -  60362399 -----G----G--------------AAA-TGA-ACC-C-A-GG-ATTAT--T----A-G------CA-------G-CT--GTGA-G------AG-A---G-TA--T-TTAAACA----AGTTCCCA--------------C
i CanFam4.chr16                                          I 5 I 8
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     1673 56 -     43241 -----G----G--------------AAA-TGA-ACC-C-A-GG-ATTAT--T----A-G------CA-------G-CT--GTGA-G------AG-A---G-TA--T-TTAAACA----AGTTCCCA--------------C
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 5 I 8
s Canis_lupus_dingo.QKWQ01000480.1                         9036373 56 -   9314153 -----g----g--------------aaa-tgA-ACC-C-A-GG-ATTAT--T----A-G------CA-------G-CT--GTGA-G------AG-A---G-TA--T-TTAAACA----AGTTCCCA--------------C
i Canis_lupus_dingo.QKWQ01000480.1                       I 5 I 8
s Canis_lupus_familiaris.chr16                            17960844 56 -  59632846 -----g----g--------------aaa-tgA-ACC-C-A-GG-ATTAT--T----A-G------CA-------G-CT--GTGA-G------AG-A---G-TA--T-TTAAACA----AGTTCCCA--------------C
i Canis_lupus_familiaris.chr16                           I 5 I 8
s Canis_lupus_orion.HG994398.1                            18502146 56 +  63665305 -----g----g--------------aaa-tgA-ACC-C-A-GG-ATTAT--T----A-G------CA-------G-CT--GTGA-G------AG-A---G-TA--T-TTAAACA----AGTTCCCA--------------C
i Canis_lupus_orion.HG994398.1                           I 5 I 8
s Capra_aegagrus.CM003241.1                               18831740 60 +  46296322 CA-A-G----G--------------AAA-CCA-CAC-TTG-GG-ACTGC--T----G-G------CA-------G-CT--GCAT-G------A-TA---G-TA--T-TTAAACA----GTTTCCCA--------------C
i Capra_aegagrus.CM003241.1                              I 3 I 8
s Capra_hircus.CM004588.1                                 18062460 60 -  44709034 CA-A-G----G--------------AAA-CCA-CAC-TTG-GG-ACTGC--T----G-G------CA-------G-CT--GCAT-G------A-TA---G-TA--T-TTAAACA----GTTTCCCA--------------C
i Capra_hircus.CM004588.1                                I 3 I 8
s Capromys_pilorides.CapPil_scaffold_65020                    2846 27 -     12242 ----------------------------------------------------------ACTC-A-TG-------T----------A------A--A-AAGAT---T---A--------ATTCCCCG--------------C
i Capromys_pilorides.CapPil_scaffold_65020               I 23 I 8
s Carlito_syrichta.NW_007259797.1                           156858 62 -    496798 -----G----G--------------GGA-GAA-AAC-C-A-GA-ACCAC--T----G-G------CAGTTGTGT-----------A------AG-A---GA--C-T---GGTTA----ACTTCCCAACTCCCAC------C
i Carlito_syrichta.NW_007259797.1                        I 2 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6931 59 -     11696 TG-G-A----A--------------AGG-CCA-CAC-T-G-GG-GTGAC--T----G-G------CA-------G-CCATG--T-G--AG-G-GTAT--G---C-----GAACA----AGTTCCGC--------------C
i Carollia_perspicillata.CarPer_scaffold_92756           I 3 I 8
s Castor_canadensis.CasCan_scaffold_2074                    138796 54 +    179628 TG-G-A----A--------------AAC-C-C-AACTT-G-GA-GCTAG--T----G-G------TA---------GT-TG--T-A--TG--A--AT---AT---T---AAA------ACTTCCCT--------------G
i Castor_canadensis.CasCan_scaffold_2074                 I 3 I 8
s Catagonus_wagneri.CatWag_scaffold_2839                     95678 60 +    217609 CA-A-G----A--------------AAA-CCA-AAC-TTG-GG-ACTAC--T----G-G------TA---------GT-CGCAT-GAC----AG---C--AT---T-T-AAACA----ATTTCCCA--------------C
i Catagonus_wagneri.CatWag_scaffold_2839                 I 3 I 8
s Cavia_aperea.AVPZ01000300.1                             18351396 32 -  23392119 -----------------------------------------------------------------TG-------T-CT--GAAT-G------A--A-AGGAT---T---AAGTA----ATTCTCCA--------------T
i Cavia_aperea.AVPZ01000300.1                            I 28 I 8
s Cavia_porcellus.DS562891.1                              18363656 32 -  23407841 -----------------------------------------------------------------TG-------T-CT--GAAT-G------A--A-AGGAT---T---AAGTA----ATTCTCCA--------------T
i Cavia_porcellus.DS562891.1                             I 25 I 8
s Cavia_tschudii.CavTsc_scaffold_8919                       102538 32 +    143979 -----------------------------------------------------------------TG-------T-CT--GAAT-G------A--A-AGGAT---T---AAGTA----ATTCTCCA--------------T
i Cavia_tschudii.CavTsc_scaffold_8919                    I 25 I 8
s Cephalopachus_bancanus.k141_1423433                         6357 62 +     31688 -----G----G--------------GGA-GAA-AAC-C-A-GA-ACCAC--T----G-G------CAGTTGTGC-----------A------AG-A---GA--C-T---GGTTA----ACTTCCCAACTCCCAC------C
i Cephalopachus_bancanus.k141_1423433                    I 2 C 0
s Cercocebus_atys.KQ010504.1                               4479156 65 +   4669795 tG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A---G-GAGT----G---C-----AGGTA----ACTTCCCACATCCTAC------C
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3650 65 +     17872 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A---G-GAGT----G---C-----AGGTA----ACTTCCCACATCCTAC------C
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4245 65 -     14043 TG-T-G----G--------------AAA-CAA-AAG-T-A-AA-ACTAC--T----G-G------CAGCTGTCC-----------A---G-GAGT----G---C-----AGGTA----ACTTCCCACATCCTAC------C
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12340 65 +     27781 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A---G-GAGT----G---C-----AGGTA----ACTTCCCACATCCTAC------C
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12494 65 -     20310 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATG----ACTTCCCACATCCTAC------C
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15470 65 +     29689 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATG----ACTTCCCACATCCTAC------C
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10230 65 -     20078 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATG----ACTTCCCACATCCTAC------C
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          18145 65 -     27936 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATG----ACTTCCCACATCCTAC------C
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            7016 65 -     17152 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATG----ACTTCCCACATCCTAC------C
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826740 65 +  39242232 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATG----ACTTCCCACATCCTAC------C
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226248 65 -  21565898 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATG----ACTTCCCACATCCTAC------C
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43367 65 -     53127 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATG----ACTTCCCACATCCTAC------C
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3617 65 +     13442 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATG----ACTTCCCACATCCTAC------C
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       18163 65 -     27947 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATG----ACTTCCCACATCCTAC------C
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1192 65 +     10558 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATG----ACTTCCCACATCCTAC------C
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4197 65 +     14005 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATG----ACTTCCCACATCCTAC------C
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            1814  6 -      8501 AA-T-G----A--------------A-------------------------------------------------------------------------------------------------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       I 3 I 2892
s Cheracebus_lucifer.k141_49986                               1428 66 -     17098 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGGTGTAC-----------G---G-GAGT----G---C-T---AGGTC----ACTTCCCACCTCCCAC------C
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1304 66 +     17877 TG-T-G----G--------------AAA-C-AGAAG-T-G-GA-ACTAC--T----G-G------CAGGTGTAC-----------G---G-GAGT----G---C-T---AGGTC----ACTTCCCACCTCCCAC------C
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            158871 66 -    216457 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGGTGTAC-----------G---G-GAGT----G---C-T---AGGTC----ACTTCCCACCTCCCAC------C
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63346 66 +     76511 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGGTGTAC-----------G---G-GAGT----G---C-T---AGGTC----ACTTCCCACCTCCCAC------C
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254494 37 +   2543920 ----------------------------------------------------------CTTT-G-TG-------T-CT--GTGT-A------AG-A--AGAT---T---AAATA----ACTCCCCA--------------C
i Chinchilla_lanigera.JH722012.1                         I 23 I 8
s Chiropotes_israelita.k141_747660                           99954 65 +    146308 TG-T-G----G--------------AAA-CAA-AAG-C-G-GA-ACTAC--T----G-G------CAGGTGTA------------C---G-GAGT----G---C-T---AGGTC----ACTTCTCACCTCCTAC------C
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          31761 65 -     50570 TG-T-G----G--------------AAA-CAA-AAG-C-G-GA-ACTAC--T----G-G------CAGGTGTA------------A---G-GAGT----G---C-T---AGGTC----ACTTCTCACCTCCTAC------C
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18432067 65 -  18827391 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATG----ACTTCCCACATCCTAC------C
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18564 65 -     50209 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATG----ACTTCCCACATCCTAC------C
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425568 65 + 135778131 tG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATG----ACTTCCCACATCCTAC------C
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1914069 65 +   2368649 tG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCCCACACCCTAC------C
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952317 65 + 200372422 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCCCACACCCTAC------C
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40590 65 +     84244 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCCCACACCCTAC------C
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549594 58 -  53390261 TG-G-G----G--------------AAA-CTA-AAC-T-G-GG-ACTCT--T----G-G------CA-------G-CT--GTgc-a--------------agattatttaaa-a----agttccca--------------c
i Condylura_cristata.JH655891.1                          I 3 I 293
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           1945 54 +     23735 -------------------------AGA-CCA-AAC-T-T-GG-ATGAT--T----G-G------CA-------G-CT--GTGT-G------AGT----G-TA--T-TTAAACT----AGTTCCCA--------------T
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      I 5 I 6
s Cricetomys_gambianus.CriGam_scaffold_18520                 52103 28 +     63868 ----------------------------------------------------------G------GG--------------A-C-ATCTGT-A-T-T------------CAATG----CTTTCTCA--------------C
i Cricetomys_gambianus.CriGam_scaffold_18520             I 25 I 8
s Crocidura_indochinensis.CroInd_scaffold_37019               4344 58 -     19598 TA-A-G----G--------------AAA-CCA-CAC-T-G-GA-AATTT--A----G-T------CA-------G-AT--GTAC-A---G--AGTAT----T---T---AAGCA----AATTACCA--------------C
i Crocidura_indochinensis.CroInd_scaffold_37019          I 2 I 616
s Cryptoprocta_ferox.CryFer_flattened_line_16129             30085 59 -     87169 TG-G-G----T--------------AAA-AGA-AAC-C-A-GG-ACAAT--T----G-G------CA-------G-CT--GTGT-G------AG-A---GA-A--T-TTAAACA----AGTTCCCA--------------C
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 3 I 8
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37775 31 +     51376 ----------------------------------------------------------ATTC-A-TG-------T----------A------AG-A--AGAT---T---A----AATAATTCTGCA--------------C
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 23 I 8
s Dasyprocta_punctata.DasPun_flattened_line_15900             1468 37 -     75252 ----------------------------------------------------------ATTC-A-TG-------T-CT--GTGT-G------AG-A---G-TA--T-T-AAATA----ATTCCCCA--------------C
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 23 I 8
s Dasypus_novemcinctus.JH564415.1                            64833  6 +   2246927 aa-t-g----a--------------a-------------------------------------------------------------------------------------------------------------------
i Dasypus_novemcinctus.JH564415.1                        I 3 I 2931
s Delphinapterus_leucas.KZ290073.1                        16813349 60 +  35494412 CA-A-G----G--------------AAA-CCA-AAC-TTG-GA-ACTAC--T----G-G------CA-------G-CT--GCAT-GAC----AGTAT----T---T---AAACA----Atttccca--------------c
i Delphinapterus_leucas.KZ290073.1                       I 239 I 8
s Desmodus_rotundus.KZ672289.1                             8631932 59 +  20541912 tg-g-a----a--------------aaa-ccA-CAC-T-G-GG-GTGTT--T----G-G------CA-------G-CCATG--T-G--AG-G-GTAT----T-C-----AAACA----agttcctc--------------c
i Desmodus_rotundus.KZ672289.1                           I 3 I 8
s Dinomys_branickii.DinBra_scaffold_21862                    37977 37 +     67921 ----------------------------------------------------------ACTT-A-TG-------T-CT--GTGC-G------A-AAT--GAT---T---AAATA----ATTCCCCA--------------C
i Dinomys_branickii.DinBra_scaffold_21862                I 23 I 8
s Dolichotis_patagonum.DolPat_scaffold_30833                 35108 37 -     42551 ----------------------------------------------------------ATTC-A-CG-------T-CT--GAGT-G------AG-A--GGAT---T---AAGTA----ATTCTCCA--------------C
i Dolichotis_patagonum.DolPat_scaffold_30833             I 23 I 8
s Eidolon_helvum.AWHC01278734.1                                140 59 +      2334 tg-g-a----g--------------aaa-aca-aat-t-t-ag-GTGAT--T----G-G------CA-------G-CTCTG--T-G--AG-G-GTAT----T-C-----AAACA----AGTTCCTC--------------C
i Eidolon_helvum.AWHC01278734.1                          I 3 I 8
s Elaphurus_davidianus.JRFZ01104969.1                       313507 59 +    607251 CA-A-G----G--------------AAA-CCA-CAC-TTG-GG-AT-GC--T----G-G------CA-------G-CT--GCAT-G------A-TA---G-TA--T-TTAAACA----ATTTCCCA--------------C
i Elaphurus_davidianus.JRFZ01104969.1                    I 3 I 8
s Ellobius_lutescens.LOEQ01008920.1                          22600 43 -    110024 ----------------------------------------------------------G------GG-------------G--T-ACCTGTGAGTATCCGATACCTCTTCATCA----CCTCCTCA--------------T
i Ellobius_lutescens.LOEQ01008920.1                      I 20 I 7
s Ellobius_talpinus.LOJH01081419.1                            2520 43 +      8657 ----------------------------------------------------------G------GG-------------G--T-ACCTGTGAGTATCCGATACCTCCTCATCA----CCCCCTCA--------------T
i Ellobius_talpinus.LOJH01081419.1                       I 20 I 7
s Eptesicus_fuscus.JH977646.1                              2148644 58 -  14770903 ag-g-a----a--------------aaa-cca-acC-T-G--G-ATGTC--T----G-G------CC-------A-CT--GTGT-G--AG-G-G---C--AT---T-T-AAACA----agttcctc--------------c
i Eptesicus_fuscus.JH977646.1                            I 3 I 8
s Erythrocebus_patas.Contig38                             21208740 65 -  21539334 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATG----ACTTCCCACATCCTAC------C
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12795 60 +    133382 CA-A-G----G--------------AAA-CCA-AAC-TTG-GG-ACTAT--T----G-G------CA-------G-CT--GCAT-GAC----AGTAT----T---T---AAACA----ATTTCCCA--------------C
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 3 I 8
s Eubalaena_japonica.EubJap_flattened_line_31514             26741 60 -     44125 CA-A-G----G--------------AAA-CCA-AAC-TTG-GG-ACTAG--T----G-G------CA-------G-CT--GCAT-GAC----AGTAT----T---T---AAACA----ATTTCCCA--------------C
i Eubalaena_japonica.EubJap_flattened_line_31514         I 3 I 8
s Felis_catus.CM001381.2                                  20238647 59 + 206538554 TG-G-G----T--------------AAA-GGA-AAC-C-A-GG-ACAAT--T----G-G------CA-------G-CT--Gtgt-g--------------agaaaatttaaata----agttcCTA--------------C
i Felis_catus.CM001381.2                                 I 3 I 8
s Felis_catus_fca126.CM031415.1                           20197522 59 + 205367284 TG-G-G----T--------------AAA-GGA-AAC-C-A-GG-ACAAT--T----G-G------CA-------G-CT--Gtgt-g--------------agaaaatttaaata----agttcCTA--------------C
i Felis_catus_fca126.CM031415.1                          I 3 I 8
s Felis_nigripes.FelNig_flattened_line_20823                 11182 59 -     36744 TG-G-G----T--------------AAA-GGA-AAC-C-A-GG-ACAAT--T----G-G------CA-------G-CT--GTGT-G------AG-A----A-A-AT-TTAAATA----AGTTCCTA--------------C
i Felis_nigripes.FelNig_flattened_line_20823             I 3 I 8
s Fukomys_damarensis.KN121974.1                             852138 23 +   3816255 -------------------------------------------------------------------------------------A------AG-A--GGAT---T---AAATA----ATTCCCCA--------------C
i Fukomys_damarensis.KN121974.1                          I 7 I 5
s Galeopterus_variegatus.GalVar_scaffold_108840               3920 62 -      9135 GA-G-T----G--------------AAA-CAA-AAC-C-A-GA-ACTAT--TTATTG-G------AA-------G-CT--GTGG-A------AG-A---G-TA--T-T-AAATA----ATTTCCTA--------------C
i Galeopterus_variegatus.GalVar_scaffold_108840          I 3 I 8
s Giraffa_tippelskirchi.LVKQ01S007888.1                     610752 60 -    660261 CA-A-G----G--------------AAA-CCA-CAC-TTG-GG-ACCGC--T----G-G------CA-------G-CT--GCAT-GAC----AGTAT----T---T---AAACA----ATTTCCTA--------------C
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 3 I 8
s Glis_glis.GliGli_scaffold_19807                            32894 58 +     49224 CA-G-G----A--------------AAACA-A-AAC-T-G-GA-GCTAT--T----A-G------CG-------G-CT--GTGT-A------AG-A---G-TA--T-T-AAATA----ATTTCCCA--------------C
i Glis_glis.GliGli_scaffold_19807                        I 3 I 8
s Gorilla_beringei.k141_3596273                              19591 56 -     32273 TG-T-G----T--------------AAA-C---AAG-T-G-GA-ACTAC--T----G-G------AAGCTGTCC-----------A-----------------------AGATA----ACGTCCCACATCCTAC------C
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341727 56 + 186649187 tG-T-G----T--------------AAA-C---AAG-T-G-GA-ACTAC--T----G-G------AAGCTGTCC-----------A-----------------------AGATA----ACGTCCCACATCCTAC------C
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   34911 58 +     78134 TG-G-G----A--------------AAACC-A-AAC-C-A-GA-GCTAT--T----A-G------GA-------G-CT--GTGT-A------AG-A---G-TA--T-T-AAATA----ATTTCCTA--------------C
i Graphiurus_murinus.GraMur_scaffold_10447               I 3 I 8
s Helogale_parvula.HelPar_flattened_line_2585               243893 59 +    327341 CC-G-G----T--------------AGA-GGA-AAC-C-A-GG-ACAAC--T----G-G------CA-------G-CCCTG--T-G------AG-A---GA-A--T-TTAAACA----AGTTCCCA--------------C
i Helogale_parvula.HelPar_flattened_line_2585            I 3 I 7
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 19956 60 +     36099 CA-G-G----G--------------AAA-CCA-CAC-TTG-GG-ACTGC--T----G-G------CA-------G-CT--GCAT-G------A-TA---G-TA--T-TTAAACA----GTTTCCCA--------------C
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 3 I 8
s Heterocephalus_glaber.JH602082.1                        20663771 23 +  22651954 -------------------------------------------------------------------------------------A------AG-A--GGAT---T---AAATA----ATTCCCCA--------------C
i Heterocephalus_glaber.JH602082.1                       I 7 I 8
s Hipposideros_armiger.JXIK01000431.1                       111982 58 +   1711038 tg-a-g----g--------------aaa-ccC-AAC-T-T-GG-ACTAT--T----G-G------CA-------G-CTATG--T-A------AG-A---G-TA--T-TTAAACA----AGTTCCCA---------------
i Hipposideros_armiger.JXIK01000431.1                    I 3 I 8
s Hipposideros_galeritus.HipGal_scaffold_101188                548 57 +      9903 TG-A-G----A---------------AA-CCC-AAC-T-T-GG-ACTAT--T----G-G------CA-------G-CT-ATA-T-A------AG-A---G-TA--T-TTAAACA----AGCTCCCA---------------
i Hipposideros_galeritus.HipGal_scaffold_101188          I 3 I 8
s Hoolock_leuconedys.ctg274                                    438385 56 +    630532 TG-T-G----T--------------AAA-C---AAG-T-G-GA-ACTAC--T----G-G------AAGCTGTCC-----------A-----------------------AGATA----ACGTCCCACATCCTAC------C
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46630 59 +     55795 CT-G-G----T--------------AAA-AGA-AAC-T-A-GG-ACAAT--T----G-G------CA-------G-CT--GTGT-G------AG-A---GA-A--T-TTAAACA----AGTTCCCA--------------C
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 3 I 8
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23442 38 -    143317 ----------------------------------------------------------ATTC-A-TG-------T-CT-TGAGT-G------AG-A--GGAT---T---AAGTA----ATTCTCCA--------------C
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 23 I 8
s Hystrix_cristata.HysCri_scaffold_5660                      84673 54 +    135385 CA-G-G----A--------------AAC-C-A-AAC-T-G-GA-ACTCT--C----G-G------CA---------CA-TGTGT-A------AG-A--GGGT---T---GAATA----A---CCCC--------------C
i Hystrix_cristata.HysCri_scaffold_5660                  I 3 I 8
s Ictidomys_tridecemlineatus.JH393364.1                    7522584 46 -   7955117 CA-G-G----G--------------AAC-C-A-AAC-T-G-GG-ACTAC--T----G-T------TA-------G-CTATG--T-A------A--------------------G----ACTTTCCA--------------C
i Ictidomys_tridecemlineatus.JH393364.1                  I 3 I 8
s Inia_geoffrensis.IniGeo_flattened_line_34779                 570 60 -     31341 CA-A-G----G--------------AAA-CCA-AAC-TTG-GA-ACTAT--T----G-G------CA-------G-CT--GCAT-GAC----AGTAT----T---T---AAACA----ATTTCCCA--------------C
i Inia_geoffrensis.IniGeo_flattened_line_34779           I 224 I 8
s Jaculus_jaculus.JH725527.1                               8278656 17 -   9596543 CA-GTG----A--------------ACC-C-A-GAC-A-G-G---------------------------------------------------------------------------------------------------
i Jaculus_jaculus.JH725527.1                             I 3 I 121
s Kogia_breviceps.KogBre_flattened_line_81059                  319 60 -     18011 CA-A-G----G--------------AAA-CCA-AAC-TTG-GA-ACCAT--T----G-G------CA-------G-CT--GCAT-GAC----AGTAT----T---T---AAAGA----ATTTCCCA--------------C
i Kogia_breviceps.KogBre_flattened_line_81059            I 3 I 8
s Lagothrix_lagothricha.k141_1005387                         16006 66 -     38430 TG-T-G----G--------------AAA-CAA-AAG-C-G-GA-ACTAC--T----G-G------CAGGTGTGC-----------G---G-GAGT----G---C-T---AGGTC----ACTTCCCACCTCCTAC------C
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_50988                    17027 58 +     29960 AG-G-A----G--------------AAA-CCA-GCC-T-G--G-ATGTG--T----G-G------CC-------T-CT--GTGT-C--AG--AGT----G-T---T-T-ACACA----GGTTCCTC--------------C
i Lasiurus_borealis.LasBor_scaffold_50988                I 518 I 15
s Lipotes_vexillifer.KE559953.1                             269621 60 -    662738 CA-A-G----G--------------AAA-CCA-AAC-TTG-GA-ACTAT--T----G-G------CA-------G-CT--GCAT-GAC----AGTAT----T---T---AAACA----ATTTCCCA--------------C
i Lipotes_vexillifer.KE559953.1                          I 242 I 8
s Lophocebus_aterrimus.ctg367                              1440698 65 +   1826925 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A---G-GAGT----G---C-----AGATA----ACTTCCCACATCCTAC------C
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17957084 56 -  59628241 -----g----g--------------aaa-tga-ACC-C-A-GG-ATTAT--T----A-G------CA-------G-CT--GTGA-G------AG-A---G-TA--T-TTAAACA----AGTTCCCA--------------C
i Lycaon_pictus.CM007581.1                               I 5 I 8
s Macaca_arctoides.k141_2326796                              10508 65 +     40492 TG-T-G----G--------------AAA-CAA-AAG-T-A-AA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCCCACATCCTAC------C
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679762 65 +  60120075 TG-T-G----G--------------AAA-CAA-AAG-T-A-AA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCCCACATCCTAC------C
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16279 65 -     26193 TG-T-G----G--------------AAA-CAA-AAG-T-A-AA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCCCACATCCTAC------C
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            84055 65 -    114318 TG-T-G----G--------------AAA-CAA-AAG-T-A-AA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCCCACATCCTAC------C
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9746 65 -     23192 TG-T-G----G--------------AAA-CAA-AAG-T-A-AA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A----ATGC-----AGATA----ACTTCCCACATCCTAC------C
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19210 65 -     29190 TG-T-G----G--------------AAA-CAA-AAG-T-A-AA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCCCACATCCTAC------C
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27788 65 +     37952 TG-T-G----G--------------AAA-CAA-AAG-T-A-AA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCCCACATCCTAC------C
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842865 65 + 187317192 tg-t-g----g--------------aaa-caa-aag-t-a-aa-actac--T----A-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCCCACATCCTAC------C
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461443 65 -  25927173 tg-t-g----g--------------aaa-caa-aag-t-a-aa-actac--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCCCACATCCTAC------C
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83644 65 +     89720 TG-T-G----G--------------AAA-CAA-AAG-T-A-AA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCCCACATCCTAC------C
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10637 65 +     20474 TG-T-G----G--------------AAA-CAA-AAG-T-A-AA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCCCACATCCTAC------C
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10434 65 -     14993 TG-T-G----G--------------AAA-CAA-AAG-T-A-AA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCCCACATCCTAC------C
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333296 65 -    668171 TG-T-G----G--------------AAA-CAA-AAG-T-A-AA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCCCACATCCTAC------C
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8746 65 -     24072 TG-T-G----G--------------AAA-CAA-AAG-T-A-AA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCCCACATCCTAC------C
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29377 65 -     45290 TG-T-G----G--------------AAA-CAA-AAG-T-A-AA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCCCACATCCTAC------C
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92307 59 +     94391 AG-G-A----G--------------AAA-CCA-AAT-T-T-GG-GTGAT--T----G-G------CA-------A-AT--GAGT-G--AG-G-GTAT----T---T---AAACA----AGTTCCTC--------------C
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 3 I 8
s Mandrillus_leucophaeus.scaffold280                      23940965 65 -  24302211 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCCCACATCCTAC------C
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355081 65 +    752769 TG-T-G----G--------------AAA-CAA-AAG-T-A-AA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCCCACATCCTAC------C
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              20292  9 +    737560 ta-a-g----g--------------aaa-c---------------------------------------------------------------------------------------------------------------
i Manis_javanica.JSZB01003497.1                          I 3 I 9
s Manis_pentadactyla.KN006162.1                              52436  9 -    317179 ta-a-g----g--------------aaa-c---------------------------------------------------------------------------------------------------------------
i Manis_pentadactyla.KN006162.1                          I 3 I 9
s Marmota_marmota.CZRN01000018.1                          33104863 57 -  40650429 CA-G-G----G--------------AAC-C-A-AAC-T-G-GG-GCTAC--T----G-G------TA-------G-CTATG--T-A------AG-A---G-TAC-T---AAATG----ACTTTCTA--------------C
i Marmota_marmota.CZRN01000018.1                         I 3 I 8
s Megaderma_lyra.MegLyr_scaffold_4542                        14796 59 -    207569 TG-G-G----G--------------AAA-CCA-AAC-T-C-GG-ATGAT--T----G-G------CA-------A-CT--GTGT-G--AG-G-GTAT----T---T---AAACA----TGTGCCCA--------------C
i Megaderma_lyra.MegLyr_scaffold_4542                    I 3 I 8
s Meriones_unguiculatus.MerUng_scaffold_7390                 34860 34 +    140813 ----------------------------------------------------------C------GG-------------G--C-ATCTGTG--TA--AG-TA--T-T-CAATA----CCTCCTTA--------------C
i Meriones_unguiculatus.MerUng_scaffold_7390             I 30 I 8
s Mesocricetus_auratus.KB708134.1                         12184284 34 -  29670104 -----g----ggaGAACGCATGGGGAATAC-A-GAC-TGA-AA-CCCA---------------------------------------------------------------------------------------------
i Mesocricetus_auratus.KB708134.1                        C 0 I 42
s Mesoplodon_bidens.MesBid_scaffold_108144                    5004 61 +     10310 CA-A-G----G--------------AAA-CCA-AAC-TTG-GA-ACTAT--T----GGA------CA-------G-CT--GCAT-GAC----AG-A----AT---T-T-AAACA----ATTTCCCA--------------T
i Mesoplodon_bidens.MesBid_scaffold_108144               I 3 I 8
s Micronycteris_hirsuta.MicHir_scaffold_52381                17678 59 -     19307 TG-G-A----A--------------AAA-CTG-CAC-T-G-GG-GTGAG--T----G-G------CT-------G-C--CGTGT-G--AG-G-GTAT----T-C-----AAACA----AGTTCCTC--------------C
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 3 I 8
s Microtus_ochrogaster.CM001695.1                         11262581 36 -  27267610 ----------------------------------------------------------G------GG-------------G--T-ACCTGTGAGT-------acctcctcatct----cctcctca--------------T
i Microtus_ochrogaster.CM001695.1                        I 20 I 7
s Miniopterus_natalensis.LDJU01000034.1                    1851874 56 +   8254450 tg-g-a----a--------------aaa-CCA---T-T-G--G-ATGAC--C----G-G------CA-------G-CT--GCGT-G--AG-G-GT----G-T-C-T---GAAca----aatccctc--------------c
i Miniopterus_natalensis.LDJU01000034.1                  I 3 I 8
s Miniopterus_schreibersii.MinSch_scaffold_18080             35558 56 +     64694 TG-G-A----A--------------AAA-CCA---T-T-G--G-ATGAC--C----A-G------CA-------G-CT--GCGT-G--AG-G-GT----G-T-C-T---GAACA----AGTCCCTC--------------C
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 3 I 7
s Miopithecus_ogouensis.k141_534055                          12645 65 -     28506 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATG----ACTTCCCACATCCTAC------C
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    28732 60 -    437263 CA-A-G----G--------------AAA-CCA-AAC-TTG-GA-ACTAC--T----G-G------CA-------G-CT--GCAT-GAC----AGTAT----T---T---AAACA----ATTTCCCA--------------C
i Monodon_monoceros.MonMon_M_scaffold_103                I 239 I 8
s Mormoops_blainvillei.MorMeg_scaffold_1417                 143270 58 -    366855 TG-G-A----A--------------GAA-A-A-CAA-T-G-GG-ATGAC--T----G-G------CA-------G-CT--GGGT-G--AG-G-GTAT----T---T---AAACA----AGTTCCTC--------------C
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 3 I 8
s Moschus_moschiferus.MosMos_scaffold_13123                   2793 59 +     82753 -A-A-G----G--------------AAA-CCT-CAC-TTG-GG-GCCAA--T----G-G------CA-------G-CT--GCAC-G------A-TAGC--AT---T-T-AAACA----ATTTCCCA--------------C
i Moschus_moschiferus.MosMos_scaffold_13123              I 3 I 8
s Murina_feae.MurFea_scaffold_85699                           8608 58 +     14753 AG-G-A----A--------------AAA-ACA-ACC-T-G--G-ATGTT--T----G-G------CC-------A-CCATG--T-G--AG-G-GT----G-T---T-T-AAACA----AGCTCCTC--------------C
i Murina_feae.MurFea_scaffold_85699                      I 3 I 7
s Mus_caroli.LT608237.1                                   84363251 34 - 120012414 ----------------------------------------------------------A------GG-------------GA---ATCTATG--TA--AG-TA--T-T-CAATA----CTTCCTCA--------------C
i Mus_caroli.LT608237.1                                  I 33 I 8
s Mus_musculus.chr8                                       87652751 34 - 129401213 ----------------------------------------------------------G------GG-------------GA---GTCTATG--TA--AG-TA--T-T-CAATA----CTTCCTCA--------------C
i Mus_musculus.chr8                                      I 33 I 8
s Mus_pahari.LT608297.1                                   31357479 14 -  89631738 -------------------------------------------------------------------------------------------------------------CAATg----cttcctca--------------c
i Mus_pahari.LT608297.1                                  I 27 I 12
s Mus_spretus.CM004101.1                                  90755240 34 - 130317789 ----------------------------------------------------------G------GG-------------GA---GTCTATG--TA--AG-TA--T-T-CAATA----CTTCCTCA--------------C
i Mus_spretus.CM004101.1                                 I 33 I 8
s Muscardinus_avellanarius.MusAve_scaffold_82313              6417 33 +     14296 ----------------------------------------------------------G------GT-------G-CT--GTGT-A------AG-A---G-TA--T-T-AAATA----ATTTTCCA--------------C
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 6 I 8
s Myocastor_coypus.MyoCoy_scaffold_10123                     73036 27 -     80779 ----------------------------------------------------------ACTC-A-TG-------T----------A------AG-AAC-G-T---T---A--------ATTCCCTG--------------C
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 23 I 8
s Myotis_brandtii.KE162005.1                                282349 57 -  10118263 ag-g-a----a--------------aac-ccA-ACC-T-G--G-ATGTT--T----G-GC------C-------A-CT--GTGT-G--AG-G-GT----G-T---T-T-ACAca-----gttcctc--------------c
i Myotis_brandtii.KE162005.1                             I 3 I 8
s Myotis_davidii.KB100139.1                                1589661 61 -   6019432 ag-g-a----a--------------aac-ccA-ACC-T-G--G-ATGTT--T----G-GCT--G-CC-------AACG-TG--T-G--AG-G-GT----G-T---T-T-ACACA----agttcctc--------------c
i Myotis_davidii.KB100139.1                              I 3 I 8
s Myotis_lucifugus.GL429869.1                              3905781 57 -   4330536 ag-g-a----a--------------aac-ccA-ACC-T-G--G-ATGTT--T----G-GC------C-------A-C--CGTGT-G--AG-G-GT----G-T---T-T-ACACa-----gttcctc--------------c
i Myotis_lucifugus.GL429869.1                            I 3 I 8
s Myotis_myotis.MyoMyo_scaffold_1392844                        180 61 +       242 AG-G-A----A--------------AAC-CCA-ACC-T-G--G-ATGTT--T----G-GC-C-G-CC-------A-C--CGTGT-G--AG-G-GT----G-T---T-T-ACACA----AGTTCCTC--------------C
i Myotis_myotis.MyoMyo_scaffold_1392844                  I 3 n 3
s Nannospalax_galili.KL204047.1                            2037034 32 -   3037898 ----------------------------------------------------------G------GG-------------G--C-AGCTGT-A-TA----A-GC----ACTATG----CTTCCTCA--------------C
i Nannospalax_galili.KL204047.1                          I 25 I 7
s Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190598  6 +    196477 AG-T-G----A--------------A-------------------------------------------------------------------------------------------------------------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_1081           I 7 I 2005
s Nasalis_larvatus.k141_413338                               18695 65 +     21681 TG-T-A----A--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCCCACATCCTAC------C
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5867696 60 +   7148211 CA-A-G----G--------------AAA-CCA-AAC-TTG-GA-ACTAT--T----G-G------CA-------G-CT--GCAT-GAC----AGTAT----T---T---AAACA----Atttccca--------------c
i Neophocaena_asiaeorientalis.KZ687982.1                 I 239 I 8
s Noctilio_leporinus.NocLep_scaffold_251                    759455 59 +    783361 TG-G-A----A--------------AAG-CCC-AGC-T-G-GG-ATGAG--T----G-G------CA-------G-CT--GTGT-G------AG-----GATA--T-TTAAATA----AGTTCCTC--------------C
i Noctilio_leporinus.NocLep_scaffold_251                 I 3 I 8
s Nyctereutes_procyonoides.CAJHUB010000658.1               9151021 56 -   9404916 -----g----g--------------aaa-tgA-ACC-C-A-GG-ATTAT--T----A-G------CA-------G-CT--GTGA-G------AG-A---G-TA--T-TTAAACA----AGTTCCCA--------------C
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 5 I 8
s Ochotona_princeps.JH802162.1                             1365884 58 +   3988456 tg-g-g----a--------------aaa-caa-aat-c-a-ga-attac--T----G-G------CA---------CC-CGTGT-AC-TG--A----C--AT---T---AAGTA----AGTTTTCA--------------C
i Ochotona_princeps.JH802162.1                           I 3 I 8
s Odocoileus_virginianus.KZ100018.1                         146297 60 +    630418 CA-A-G----G--------------AAA-CCA-CAC-TTG-GG-ACCGC--T----G-G------CA-------G-CT--GCAT-G------A--A--AG-TA--T-TTAAACA----ACTTCCCA--------------C
i Odocoileus_virginianus.KZ100018.1                      I 3 I 8
s Okapia_johnstoni.LVCL01S0005463.1                          78653 60 -    150152 CA-A-G----G--------------AAA-CCA-CAC-TTG-GG-ACCGC--T----G-G------CA-------G-CT--GCAT-GAC----AGTAT----T---T---AAACA----ATTTCCTA--------------C
i Okapia_johnstoni.LVCL01S0005463.1                      I 3 I 8
s Ondatra_zibethicus.OndZib_scaffold_46174                   27241 43 +     28053 ----------------------------------------------------------G------GG-------------G--T-ACATATGAGTATCTGATACCTCGTCATCA----CCTCCTCA--------------T
i Ondatra_zibethicus.OndZib_scaffold_46174               I 20 I 7
s Orcinus_orca.KB316932.1                                  2783597 60 -  10937097 CA-A-G----G--------------AAA-CCA-AAC-TTG-GA-ACTAT--T----G-G------CA-------G-CT--GCAT-GAC----AGTAT----T---T---AAACA----Atttccca--------------c
i Orcinus_orca.KB316932.1                                I 239 I 8
s Otocyon_megalotis.JAEUCK010005147.1                       464105 56 -    559221 -----g----g--------------aaa-tgA-ACC-C-A-GG-ATTAT--T----A-G------CA-------G-CT--GTGA-G------AG-A---G-TA--T-TTAAGCA----AGTTCCCA--------------C
i Otocyon_megalotis.JAEUCK010005147.1                    I 5 I 8
s Ovis_aries.CM001607.2                                   17587918 60 +  44047080 CA-A-G----G--------------AAA-CCA-CAC-TTG-GG-ACTGC--T----G-G------CA-------G-CT--GCAT-G------A-TA---G-TA--T-TTAAACA----GTTTCCCA--------------C
i Ovis_aries.CM001607.2                                  I 3 I 8
s Ovis_canadensis.OviCan_scaffold_2572                      175910 60 -    191736 CA-A-G----G--------------AAA-CCA-CAC-TTG-GG-ACTGC--T----G-G------CA-------G-CT--GCAT-G------A-TA---G-TA--T-TTAAACA----GTTTCCCA--------------C
i Ovis_canadensis.OviCan_scaffold_2572                   I 3 I 8
s Pan_paniscus.KQ411613.1                                    47692 56 +     80009 tG-T-G----T--------------AAA-C---AAG-T-G-GA-ACTAC--T----G-G------AAGCTGTCC-----------A-----------------------AGATA----ACGTCCCACATCCTAC------C
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146554 56 + 189151597 tG-T-G----T--------------AAA-C---AAG-T-G-GA-ACTAC--T----G-G------AAGCTGTCC-----------A-----------------------AGATA----ACGTCCCACATCCTAC------C
i Pan_troglodytes.CM009242.2                             C 0 I 6
s Panthera_onca.PanOnc_flattened_line_3271                  152721 59 +    230217 TG-G-G----T--------------AAA-GGA-AAC-C-A-GG-ACAAT--T----G-G------CA-------G-CT--GTGT-G------AG-A----A-A-AT-TTAAACA----AGTTCCTA--------------C
i Panthera_onca.PanOnc_flattened_line_3271               I 3 I 8
s Panthera_pardus.KV860321.1                                266032 59 +  18783137 TG-G-G----T--------------AAA-GGA-AAC-C-A-GG-ACAAT--T----G-G------CA-------G-CT--GTGT-G------AG-A----A-A-AT-TTAAACA----AGTTCCTA--------------C
i Panthera_pardus.KV860321.1                             I 3 I 8
s Panthera_tigris.KE722367.1                               4722858 59 -   8748460 TG-G-G----T--------------AAA-GGA-AAC-C-A-GG-ACAAT--T----G-G------CA-------G-CT--GTGT-G------AG-A----A-A-AT-TTAAACA----AGTTCCTA--------------C
i Panthera_tigris.KE722367.1                             I 3 I 8
s Pantholops_hodgsonii.KE114653.1                          1266819 60 -   2937107 CA-A-G----G--------------AAA-CCA-CAC-TTG-GG-ACTGC--T----G-G------CA-------G-CT--GCAT-G------A-TA---G-TA--T-TTAAACA----ATTTCCCA--------------C
i Pantholops_hodgsonii.KE114653.1                        I 3 I 8
s Papio_anubis.CM001495.2                                183446771 65 + 183742232 tG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A---G-GAGT----G---C-----AGATA----ACTTCCCACATCCTAC------C
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10421 65 +     20448 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A---G-GAGT----G---C-----AGATA----ACTTCCCACATCCTAC------C
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567229 65 +  20919399 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A---G-GAGT----G---C-----AGATA----ACTTCCCACATCCTAC------C
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   9161 65 +     41871 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A---G-GAGT----G---C-----AGATA----ACTTCCCACATCCTAC------C
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12454 65 +     27711 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A---G-GAGT----G---C-----AGATA----ACTTCCCACATCCTAC------C
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3453 65 -     11374 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A---G-GAGT----G---C-----AGATA----ACTTCCCACATCCTAC------C
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14190 34 -     78924 ----------------------------------------------------------G------CA-------G-CT--GTGT-T------AG-A---GA-A--T-TTAAACA----AGTTCCCA--------------C
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 13 I 8
s Peromyscus_maniculatus.KI615324.1                       18197373 32 -  18517816 ----------------------------------------------------------G------GG-------------G--C-ATCTGTGAG---C--A--C-T---GAATA----CCACCTCA--------------C
i Peromyscus_maniculatus.KI615324.1                      I 34 I 8
s Petromus_typicus.PetTyp_scaffold_221660                      490 37 -      2102 ----------------------------------------------------------A-TCGA-TG-------T-C--CGAGG-G--TG--AG-----GA--C-T---AAATA----ACTGACCA--------------C
i Petromus_typicus.PetTyp_scaffold_221660                I 23 I 8
s Phocoena_phocoena.PhoPho_flattened_line_24159              10657 60 +     63832 CA-A-G----G--------------AAA-CCA-AAC-TTG-GA-ACTAT--T----G-G------CA-------G-CT--GCAT-GAC----AGTAT----T---T---AAACA----ATTTCCCA--------------C
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 243 I 8
s Piliocolobus_badius.k141_1142974                            1772 65 +     68526 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCCCACATCCTAC------C
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        41918 65 +     89929 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCCCACATCCTAC------C
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43332 65 +     51399 TG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCCCACATCCTAC------C
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299569 65 -  14605196 tG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCCCACATCCTAC------C
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3413 58 +     22620 AG-G-A----A--------------AAA-CCA-ACC-T-G--G-GTGTC--T----G-G------CC-------A-CT--GTGT-GAC-G-G--TAT----T---T---AAACA----AGTCCCTC--------------C
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 3 I 8
s Pithecia_albicans.k141_1476471                              5217 66 +     26961 TG-T-G----G--------------AAA-CAA-AAG-C-A-GA-ACTAC--T----G-G------CAGGTGTAC-----------G---G-GAGT----G---C-T---GGGTC----ACTTCCCACCTCCTAC------C
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1362 66 +     23417 TG-T-G----G--------------AAA-CAA-AAG-C-A-GA-ACTAC--T----G-G------CAGGTGTAC-----------G---G-GAGT----G---C-T---GGGTC----ACTTCCCACCTCCTAC------C
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                5209 66 +     29694 TG-T-G----G--------------AAA-CAA-AAG-C-A-GA-ACTAC--T----G-G------CAGGTGTAC-----------G---G-GAGT----G---C-T---GGGTC----ACTTCCCACCTCCTAC------C
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          30235 66 +     52772 TG-T-G----G--------------AAA-CAA-AAG-C-A-GA-ACTAC--T----G-G------CAGGTGTAC-----------G---G-GAGT----G---C-T---GGGTC----ACTTCCCACCTCCTAC------C
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           5231 66 +     26198 TG-T-G----G--------------AAA-CAA-AAG-C-A-GA-ACTAC--T----G-G------CAGGTGTAC-----------G---G-GAGT----G---C-T---GGGTC----ACTTCCCACCTCCTAC------C
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3941779 66 +   4542175 TG-T-G----G--------------AAA-CAA-AAG-C-A-GA-ACTAC--T----G-G------CAGGTGTAC-----------G---G-GAGT----G---C-T---GGGTC----ACTTCCCACCTCCTAC------C
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            5195 66 -     23490 TG-T-G----G--------------AAA-CAA-AAG-C-A-GA-ACTAC--T----G-G------CAGGTGTAC-----------G---G-GAGT----G---C-T---GGGTC----ACTTCCCACCTCCTAC------C
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610              0 34 +      7680 ----------------------------------------------------------G------CA-------G-CT--GCAT-GAC----AGTAT----T---T---AAACA----ATTTCCCA--------------C
i Platanista_gangetica.PlaMin_flattened_line_173610      N 0 I 8
s Plecturocebus_bernhardi.k141_2549090                        9453 63 -     39866 -----G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGGTGTAC-----------A---G-GAGT----G---C-T---AGGTC----ACTTCCCGCCTCCCAC------C
i Plecturocebus_bernhardi.k141_2549090                   I 2 C 0
s Plecturocebus_brunneus.k141_1495506                        18619 63 +     34906 -----G----G--------------AAA-CAA-AAG-C-G-GA-ACTAC--T----G-G------CAGGTGTAC-----------A---G-GAGT----G---C-T---AGGTC----ACTTCCCGCCTCCCAC------C
i Plecturocebus_brunneus.k141_1495506                    I 2 C 0
s Plecturocebus_caligatus.k141_1382851                       22881 63 +     87950 -----G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGGTGTAC-----------A---G-GAGT----G---C-T---AGGTC----ACTTCCCGCCTCCCAC------C
i Plecturocebus_caligatus.k141_1382851                   I 2 C 0
s Plecturocebus_cinerascens.k141_1164729                     23710 63 +     88961 -----G----G--------------AAA-CAA-AAG-C-G-GA-ACTAC--T----G-G------CAGGTGTAC-----------A---G-GAGT----G---C-T---AGGTC----ACTTCCCGCCTCCCAC------C
i Plecturocebus_cinerascens.k141_1164729                 I 2 C 0
s Plecturocebus_cupreus.k141_2351393                          9381 63 +     39403 -----G----G--------------AAA-CAA-AAG-C-G-GA-ACTAC--T----G-G------CAGGTGTAC-----------A---G-GAGT----G---C-T---AGGTC----ACTTCCCGCCTCCCAC------C
i Plecturocebus_cupreus.k141_2351393                     I 2 C 0
s Plecturocebus_dubius.k141_1058799                          23162 63 -     87928 -----G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGGTGTAC-----------A---G-GAGT----G---C-T---AGGTC----ACTTCCCGCCTCCCAC------C
i Plecturocebus_dubius.k141_1058799                      I 2 C 0
s Plecturocebus_grovesi.k141_2013005                         30121 63 +     60166 -----G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGGTGTAC-----------A---G-GAGT----G---C-T---AGGTC----ACTTCCCGCCTCCCAC------C
i Plecturocebus_grovesi.k141_2013005                     I 2 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30318 63 +     67232 -----G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGGTGTAC-----------A---G-GAGT----G---C-T---AGGTC----ACTTCCCGCCTCCCAC------C
i Plecturocebus_hoffmannsi.k141_3303950                  I 2 C 0
s Plecturocebus_miltoni.k141_349282                          25791 63 +     90634 -----G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGGTGTAC-----------A---G-GAGT----G---C-T---AGGTC----ACTTCCCGCCTCCCAC------C
i Plecturocebus_miltoni.k141_349282                      I 2 C 0
s Plecturocebus_moloch.k141_1031110                          23163 63 -     89403 -----G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGGTGTAC-----------A---G-GAGT----G---C-T---AGGTC----ACTTCCCGCCTCCCAC------C
i Plecturocebus_moloch.k141_1031110                      I 2 C 0
s Pongo_abelii.NDHI03003595.1                                 5529 59 -     34550 tGTT-G----T---A----------AAA-C---AAG-T-G-GA-ACTAC--T----G-G----A-AAGCTGTCC-----------A-----------------------AGATA----ACGTCCCACATCCTAC------C
i Pongo_abelii.NDHI03003595.1                            I 11 I 7
s Pongo_pygmaeus.ctg66                                     9574308 56 +   9816681 TG-T-G----T--------------AAA-C---AAG-T-G-GA-ACTAC--T----G-G------AAGCTGTCC-----------A-----------------------AGATA----ACGTCCCACATCCTAC------C
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76872 65 -     81375 TG-T-A----A--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCCCACATCCTAC------C
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8689 65 +     19060 TG-T-A----A--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCCCACATCCTAC------C
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            12501 34 -     21651 ----------------------------------------------------------C------GG-------------G--C-ATCTGTG--TA--AG-TA--T-T-CAATA----CCTCCTCA--------------C
i Psammomys_obesus.NESX01036370.1                        I 30 I 8
s Pteronotus_parnellii.KE909381.1                            16750 59 -     21811 TG-G-A----A--------------GAA-CCA-AGC-T-G-GG-ATGAT--T----G-G------CA-------G-CT--GTGT-G--AG-G-GTAT----T---T---AAACG----AGTTCCTC--------------C
i Pteronotus_parnellii.KE909381.1                        I 3 I 8
s Pteropus_alecto.KB030862.1                              22978389 59 +  28871421 TG-G-A----G--------------AAA-CCA-AAT-T-T-GG-GTGTT--T----C-G------CA-------G-CT--GTAT-G--AG-G-GTAT----T---T---AAACA----AGTTCCTC--------------T
i Pteropus_alecto.KB030862.1                             I 3 I 8
s Puma_concolor.QAVW01001104.1                            20275917 59 -  38429054 TG-G-G----T--------------AAA-GGA-AAC-C-A-GG-ACAAT--T----G-G------CA-------G-CT--Gtgt-g--------------agaaaatttaaata----agttcCTA--------------C
i Puma_concolor.QAVW01001104.1                           I 3 I 8
s Pygathrix_cinerea.k141_1153803                             18681 65 -     91421 TG-T-A----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCCCACATCCTAC------C
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612804 65 +   7812017 TG-T-A----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCTCACATCCTAC------C
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18711 65 -     72585 TG-T-A----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCTCACATCCTAC------C
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  8128 60 +     55207 CA-A-G----G--------------AAA-CCA-CAC-TTG-GG-ACCGC--T----G-G------CA-------G-CT--GCAT-G------A-TA---G-TA--T-TTAAACA----ATTTCCCA--------------C
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 3 I 8
s Rattus_norvegicus.chr16                                 53572751 34 +  90668790 ----------------------------------------------------------G------GG-------------GA---ATCTGTG--TA--AG-TA--T-T-CAATA----CTTCTTCA--------------C
i Rattus_norvegicus.chr16                                I 33 I 8
s Rhinolophus_sinicus.LVEH01000134.1                        368436 58 -   3329780 tg-a-g----a--------------aaa-gca-aaC-T-T-GA-ACTAT--T----G-G------CA-------G-CT--GTGT-G--AG-G-GTAT----T---T---AAACA----AGTTCCCA---------------
i Rhinolophus_sinicus.LVEH01000134.1                     I 3 I 8
s Rhinopithecus_bieti.k119_217274                            10379 65 -     11128 TG-T-A----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCCCACATCCTAC------C
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239747 65 - 195417433 tG-T-A----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCCCACATCCTAC------C
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675394 65 +   7961872 TG-T-A----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCCCACATCCTAC------C
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89461 59 -     96226 TG-A-A----G--------------AAA-CCA-AAT-T-T-GG-ACGAT--T----G-G------CA-------G-CT--GTGT-G--AG-G-GTAT----T---T---CAACA----AGTTTCTC--------------C
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 3 I 8
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154735 59 -    313613 CA-G-A----G--------------AAA-TCA-AAC-T-G-GG-ACTCT--T----G-A------CA-------G-CT--GTGC-A------AG-A---G-TA--T-TTAAACA----AGGTCCCA--------------C
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 3 I 7
s Semnopithecus_entellus.k141_1672505                         3553 65 -     12572 TG-T-A----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCCCACATCCTAC------C
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30405 65 +     39453 TG-T-A----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCCCACATCCTAC------C
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           10913 65 +     27826 TG-T-A----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCCCACATCCTAC------C
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10454 65 -     19483 TG-T-A----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCCCACATCCTAC------C
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3752 65 -     12762 TG-T-A----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCCCACATCCTAC------C
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3597 65 +     13763 TG-T-A----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCCCACATCCTAC------C
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     2396 20 -     30804 -------------------------------------------------------------------------------------------------------------GAATA----CCTCCTCA--------TCCTCAT
i Sigmodon_hispidus.SigHis_scaffold_42075                I 32 I 8
s Sorex_araneus.JH798187.1                                13652567 59 -  18376816 aa-a-g----g--------------aaa-cca-taG-T-G-AA-ATTTT--T----G-T------CA-------G-GT--GTAC-A--AG-G-GTAT----T---T---AAACA----AATTCCCA--------------C
i Sorex_araneus.JH798187.1                               I 3 I 8
s Spermophilus_dauricus.KZ294078.1                         1955730 57 -   3870691 CA-G-G----G--------------AAC-C-A-AAC-T-G-GG-ACTAC--T----G-G------TA-------G-CTATG--T-A------AG-A---G-TAC-T---AAATG----ACTTTCCA--------------C
i Spermophilus_dauricus.KZ294078.1                       I 3 I 8
s Suricata_suricatta.SurSur_flattened_line_6629              19886 59 -    196729 CC-G-G----T--------------CGA-GGA-AAC-C-A-GG-ACAAC--C----G-G------CA-------G-C--CCCGT-GC--G--AG-A----AT---T-T-AAACA----AGTTCCCA--------------C
i Suricata_suricatta.SurSur_flattened_line_6629          I 3 I 7
s Sus_scrofa.CM000828.4                                    6813261 60 +  69701581 ca-a-g----a--------------aaa-cca-AAC-TTG-GG-ACTAT--T----G-G------TA-------G-TT-TCA-T-GAC----AG---C--AT---T-T-AAACA----Atttccca--------------c
i Sus_scrofa.CM000828.4                                  I 3 I 8
s Tadarida_brasiliensis.TadBra_scaffold_25820                12793 59 +     41958 AG-G-A----A--------------AAT-CCA-GAC-T-G-GG-ATGAT--T----G-G------CA-------G-CT--GTGT-G--AG-G-GT----G-T---TC--AAACC----AGTTCTTC--------------C
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 3 I 8
s Tamandua_tetradactyla.TamTet_scaffold_1782                 73983  6 +    116680 AG-T-G----A--------------A-------------------------------------------------------------------------------------------------------------------
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 7 I 2010
s Tarsius_lariang.k141_2201908                               27350 66 +     70052 TG-G-G----G--------------GGA-AAA-AAC-C-A-GA-ACCAC--A----G-G------CAGTTGTGT-----------A------AG-A---G-TAC-T---GGTTA----AATTCCCAACTCCCAC------C
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                2147 66 -     16117 TG-G-G----G--------------GGA-AAA-AAC-C-A-GA-ACCAC--T----G-G------CAGTTGTGT-----------A------AG-A---G-TAC-T---GGTTA----AATTCCCAACTCCCAC------C
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186432077 65 + 186847797 tG-T-G----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A---G-GAGT----G---C-----AGATA----ACTTCCCACATCCTAC------C
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              107165 36 +    114563 ----------------------------------------------------------ATTG-A-TG-------T-CT--GAGG-G------AG-A--GGGT---T---AAATA----ACTG-CCA--------------C
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 23 I 8
s Tolypeutes_matacus.TolMat_scaffold_228639                   7707  6 +      8208 AA-T-G----A--------------A-------------------------------------------------------------------------------------------------------------------
i Tolypeutes_matacus.TolMat_scaffold_228639              I 3 N 0
s Tonatia_saurophila.TonSau_scaffold_294                     83023 59 +    610378 TG-G-A----A--------------AAA-CCA-CAC-T-A-GG-GTGAT--T----G-G------CA-------G-C--CGTGT-G--AG-G-GTAT----T-C-----AAACA----AGTTCCTC--------------C
i Tonatia_saurophila.TonSau_scaffold_294                 I 3 I 8
s Trachypithecus_auratus.k141_722599                         14491 65 -     20410 TG-T-A----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCCCATATCCTAC------C
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3614 65 -     12674 TG-T-A----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCCCACATCCTAC------C
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14599 65 +     19930 TG-T-A----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCCCATATCCTAC------C
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      11001 65 -     19997 TG-T-A----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AGT----G-TGC-----AGATA----ACTTCCCACATCCTAC------C
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            51143 35 -     60166 TG-T-A----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-------------------------------------------------------------------
i Trachypithecus_geei.k141_277701                        C 0 I 29
s Trachypithecus_germaini.k141_912491                        18605 65 -     27529 TG-T-A----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCCCACATCCTAC------C
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                        237 65 +      9229 TG-T-A----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AGT----G-TGC-----AGATA----ACTTCCCACATCCTAC------C
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          12139 65 -     21137 TG-T-A----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCCCACATCCTAC------C
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                     239 65 +      9131 TG-T-A----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AGT----G-TGC-----AGATA----ACTTCCCACATCCTAC------C
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                          203 65 -      3730 TG-T-A----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCCCACATCCTAC------C
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28471 65 +     32220 TG-T-A----G--------------AAA-CAA-AAG-C-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCCCACATCCTAC------G
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942568 65 +   6242583 TG-T-A----G--------------AAA-CAA-AAG-C-G-GA-ACTAC--T----G-G------CAGCTGTCC-----------A------AG-A---G-TGC-----AGATA----ACTTCCCACATCCTAC------C
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11821 35 +     20839 TG-T-A----G--------------AAA-CAA-AAG-T-G-GA-ACTAC--T----G-G------CAGCTGTCC-------------------------------------------------------------------
i Trachypithecus_pileatus.k141_2007326                   C 0 I 29
s Tragulus_javanicus.TraJav_scaffold_40725                    2046 60 +     27266 CA-A-G----G--------------AAA-TGA-AGC-TTG-GG-ACTAC--C----A-G------CA-------G-CT--GCAT-GAC----AGTAT----T---T---AAACA----ATTTCCAC--------------C
i Tragulus_javanicus.TraJav_scaffold_40725               I 3 I 8
s Tupaia_chinensis.KB320699.1                              2157736 23 +   4065304 -------------------------------------------------------------------------------------A------AG-AAC--AT---T---AAATA----ATTTCCCA--------------C
i Tupaia_chinensis.KB320699.1                            I 27 C 0
s Tupaia_tana.TupTan_flattened_line_306982                     159 23 -      4186 -------------------------------------------------------------------------------------A------AG-AAC--AT---T---AAATA----ATTTCCCA--------------C
i Tupaia_tana.TupTan_flattened_line_306982               I 27 C 0
s Tursiops_truncatus.MRVK01000835.1                       15739848 60 +  33153633 CA-A-G----G--------------AAA-CCA-AAC-TTG-GA-ACTAT--T----G-G------CA-------G-CT--GCAT-GAC----AGTAT----T---T---AAACA----ATTTCCCA--------------C
i Tursiops_truncatus.MRVK01000835.1                      I 252 I 8
s Uropsilus_gracilis.UroGra_scaffold_12083                   54876 33 -     77625 -----------------------------------------------------------------CA-------G-CT--G-TTCA--AG-G-GT--CC--T---T---AAACA----AGTTCCTG--------------C
i Uropsilus_gracilis.UroGra_scaffold_12083               I 27 I 8
s Vicugna_pacos.KN270157.1                                 5373552 60 -   5488506 CA-A-G----G--------------AAA-CCA-GAC-TTG-GG-ACTAT--T----G-G------CA-------G-CT--GTAT-GAC----AGTAT----T---T---AAACa----atttccca--------------c
i Vicugna_pacos.KN270157.1                               I 3 I 8
s Vulpes_lagopus.VulLag_flattened_line_30954                 12549 56 -     43706 -----G----G--------------AAA-TGA-ACC-C-A-GG-ATTAT--T----A-G------CA-------G-CT--GTGA-G------AG-A---G-TA--T-TTAAACA----AGTTCCCA--------------C
i Vulpes_lagopus.VulLag_flattened_line_30954             I 5 I 8
s Xerus_inauris.XerIna_scaffold_2302                          2715 56 +    224448 CA-G-G----G--------------AAC-C-A-AAC-G-G-GG-ACTAG--T----G-G------TG-------G-CTATG--T-C------AG---C-G-TA--T---ACATG----ATTTCCTA--------------C
i Xerus_inauris.XerIna_scaffold_2302                     I 3 I 8
s Zapus_hudsonius.ZapHud_scaffold_11398                      16392 57 +     63895 TA-GTG----A--------------ACC-CG--GGC-A-G-GAAACCAA--T----A-G------AA-------G-CT--GTAT-A------AGTA----AT-------AAATA----CTTCCCCA--------------C
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 3 I 8
s Ziphius_cavirostris.ZipCav_flattened_line_761354             159 61 -      1267 CA-A-G----G--------------AAA-CCA-AAC-TTG-GA-ACTAT--T----GGA------CA-------G-CT--GCAT-GAC----AG-A----AT---T-T-AAACA----ATTTCCCA--------------T
i Ziphius_cavirostris.ZipCav_flattened_line_761354       I 3 I 8
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Pteropus_vampyrus.KN534172.1                                8028 12 -      8028 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                        67149665 1414 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Onychomys_torridus.OnyTor_scaffold_2986                    82703  0 +    102263 C
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Octodon_degus.JH651603.1                                  749216 44 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     8427 743 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T

a score=0.000000
s hg38.chrUn_KI270753v1                                      10402 7 +     62944 TTCT-TG--G
s Acinonyx_jubatus.LLWD01001279.1                           828970 7 -   1699592 TGCT-AA--G
i Acinonyx_jubatus.LLWD01001279.1                        I 8 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     72884 7 +     87051 TGCT-CA--C
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 8 C 0
s Allenopithecus_nigroviridis.k141_3361533                   18262 7 -     52922 TGCT-TG--G
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         18199 7 -     28001 TGCT-TG--G
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8694 7 -     18505 TGCT-TG--G
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9547 7 -     12518 TGCT-TG--G
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             10003 7 +     51355 TGCC-TG--G
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                3110 7 -     36483 TGCC-TG--G
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13563 7 +     28687 TGCC-TG--G
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 2035 7 +     27940 TGCC-TG--G
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            3114 7 -      9457 TGCC-TG--G
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             2072 7 +     30492 TGCC-TG--G
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              6067 7 +     47717 TGCC-TG--G
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              2803 7 +      5663 TGCC-TG--G
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             17254 7 +     50774 TGCC-TG--G
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          677702 7 -   2318259 TACT-TG--G
i Ammotragus_lervia.NIVO01071767.1                       I 8 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      187247 7 +    412891 TATT-TG--G
i Anoura_caudifer.AnoCau_scaffold_1412                   I 8 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469            100177 7 -    100397 TGCT-TG--G
i Antilocapra_americana.AntAmePen_scaffold_12469         I 8 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      14309 7 +     20879 TGCT-TG--C
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 8 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6654 7 +     43469 TATT-GG--G
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 8 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21210268 7 -  21539123 TGCC-TG--G
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               45064 7 -     48001 TGCC-TG--G
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 27868 7 -     30947 TGCC-TG--G
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9640 7 -     89868 TGCC-TG--G
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              14024 7 -     40414 TGCC-TG--G
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                21913 7 +     72325 TGCC-TG--G
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193550 7 +  23207421 tgct-TG--G
i Balaenoptera_acutorostrata.KI537508.1                  I 8 C 0
s Balaenoptera_bonaerensis.DF707048.1                         4015 7 -     18090 tgct-TG--G
i Balaenoptera_bonaerensis.DF707048.1                    I 8 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    28787 6 +     34529 C-CT-TG--G
i Beatragus_hunteri.BeaHun_scaffold_50177                I 8 C 0
s Bison_bison.KN261452.1                                    202789 7 -    288883 TGCT-TG--G
i Bison_bison.KN261452.1                                 I 8 C 0
s Bos_indicus.CM003047.1                                  20276029 7 +  48749331 TGCT-TG--G
i Bos_indicus.CM003047.1                                 I 8 C 0
s Bos_mutus.JH880303.1                                     1128582 7 -   1948126 TGCT-TG--G
i Bos_mutus.JH880303.1                                   I 8 C 0
s Bos_taurus.CM000203.6                                   18086667 7 +  45695690 TGCT-TG--G
i Bos_taurus.CM000203.6                                  I 8 C 0
s Bubalus_bubalis.KI419123.1                               2822627 7 +   4408762 TGCT-TG--G
i Bubalus_bubalis.KI419123.1                             I 8 C 0
s Cacajao_ayresi.k141_552049                                102890 7 -    122966 TGCC-TG--G
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   62393 7 +     81800 TGCC-TG--G
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31575 7 -     95584 TGCC-TG--G
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55676 7 -    119600 TGCC-TG--G
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10004099 7 -  17673402 tgct-tG--G
i Camelus_bactrianus.KN276810.1                          I 8 C 0
s Camelus_dromedarius.KN272107.1                           2336571 7 -   7040546 tgct-tG--G
i Camelus_dromedarius.KN272107.1                         I 8 C 0
s Camelus_ferus.KB017975.1                                  404869 7 -   1652518 tgct-tG--G
i Camelus_ferus.KB017975.1                               I 8 C 0
s CanFam4.chr16                                           17800994 7 -  60362399 TGCT-TA--G
i CanFam4.chr16                                          I 8 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     1737 7 -     43241 TGCT-TA--G
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 8 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9036437 7 -   9314153 TGCT-TA--G
i Canis_lupus_dingo.QKWQ01000480.1                       I 8 C 0
s Canis_lupus_familiaris.chr16                            17960908 7 -  59632846 TGCT-TA--G
i Canis_lupus_familiaris.chr16                           I 8 C 0
s Canis_lupus_orion.HG994398.1                            18502210 7 +  63665305 TGCT-TA--G
i Canis_lupus_orion.HG994398.1                           I 8 C 0
s Capra_aegagrus.CM003241.1                               18831808 7 +  46296322 TACT-TG--G
i Capra_aegagrus.CM003241.1                              I 8 C 0
s Capra_hircus.CM004588.1                                 18062528 7 -  44709034 TACT-TG--G
i Capra_hircus.CM004588.1                                I 8 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    2881 7 -     12242 TGTT-TA--G
i Capromys_pilorides.CapPil_scaffold_65020               I 8 C 0
s Carlito_syrichta.NW_007259797.1                           156920 6 -    496798 TGCT-T---G
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                6998 7 -     11696 TGCT-TG--G
i Carollia_perspicillata.CarPer_scaffold_92756           I 8 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138858 7 +    179628 GGAT-AG--G
i Castor_canadensis.CasCan_scaffold_2074                 I 8 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     95746 7 +    217609 TTCT-TG--G
i Catagonus_wagneri.CatWag_scaffold_2839                 I 8 C 0
s Cavia_aperea.AVPZ01000300.1                             18351436 7 -  23392119 AGTT-TA--G
i Cavia_aperea.AVPZ01000300.1                            I 8 C 0
s Cavia_porcellus.DS562891.1                              18363696 7 -  23407841 AGTT-TA--G
i Cavia_porcellus.DS562891.1                             I 8 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                       102578 7 +    143979 AGTT-TA--G
i Cavia_tschudii.CavTsc_scaffold_8919                    I 8 C 0
s Cephalopachus_bancanus.k141_1423433                         6419 6 +     31688 TGCT-T---G
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4479221 7 +   4669795 TGCT-TG--G
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3715 7 +     17872 TGCT-TG--G
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4310 7 -     14043 TGCT-TG--G
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12405 7 +     27781 TGCT-TG--G
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12559 7 -     20310 TGCT-TG--G
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15535 7 +     29689 TGCT-TG--G
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10295 7 -     20078 TGCT-TG--G
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          18210 7 -     27936 TGCT-TG--G
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            7081 7 -     17152 TGCT-TG--G
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826805 7 +  39242232 TGCT-TG--G
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226313 7 -  21565898 TGCT-TG--G
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43432 7 -     53127 TGCT-TG--G
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3682 7 +     13442 TGCT-TG--G
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       18228 7 -     27947 TGCT-TG--G
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1257 7 +     10558 TGCT-TG--G
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4262 7 +     14005 TGCT-TG--G
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            4712 7 -      8501 ttta-tg--g
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       I 2892 I 1695
s Cheracebus_lucifer.k141_49986                               1494 7 -     17098 TGCC-TG--G
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1370 7 +     17877 TGCC-TG--G
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            158937 7 -    216457 TGCC-TG--G
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63412 7 +     76511 TGCC-TG--G
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254539 7 +   2543920 TGTT-TA--G
i Chinchilla_lanigera.JH722012.1                         I 8 C 0
s Chiropotes_israelita.k141_747660                          100019 7 +    146308 TGCC-TG--G
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          31826 7 -     50570 TGCC-TG--G
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18432132 7 -  18827391 TGCT-TG--G
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18629 7 -     50209 TGCT-TG--G
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425633 7 + 135778131 TGCT-TG--G
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1914134 7 +   2368649 TGCT-TG--G
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952382 7 + 200372422 TGCT-TG--G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40655 7 +     84244 TGCT-TG--G
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549945 7 -  53390261 CGGC-TG--G
i Condylura_cristata.JH655891.1                          I 293 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           2005 7 +     23735 TATT-TG--G
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      I 6 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 52139 7 +     63868 TGTT-CT--C
i Cricetomys_gambianus.CriGam_scaffold_18520             I 8 C 0
s Crocidura_indochinensis.CroInd_scaffold_239572              3390 7 -      5012 TGTT-TG--T
i Crocidura_indochinensis.CroInd_scaffold_239572         I 76 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             30152 7 -     87169 TGCT-AA--G
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 8 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37814 7 +     51376 TGTT-TA--G
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 8 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900             1513 7 -     75252 TGTT-TA--G
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 8 C 0
s Dasypus_novemcinctus.JH564415.1                            67770 7 +   2246927 ttga-tg--g
i Dasypus_novemcinctus.JH564415.1                        I 2931 I 1659
s Delphinapterus_leucas.KZ290073.1                        16813417 7 +  35494412 tgcT-TG--G
i Delphinapterus_leucas.KZ290073.1                       I 8 C 0
s Desmodus_rotundus.KZ672289.1                             8631999 7 +  20541912 tatT-TG--G
i Desmodus_rotundus.KZ672289.1                           I 8 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    38022 7 +     67921 CATT-AA--G
i Dinomys_branickii.DinBra_scaffold_21862                I 8 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 35153 7 -     42551 ATTT-TA--G
i Dolichotis_patagonum.DolPat_scaffold_30833             I 8 C 0
s Eidolon_helvum.AWHC01278734.1                                207 7 +      2334 TGCT-TG--G
i Eidolon_helvum.AWHC01278734.1                          I 8 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       313574 7 +    607251 TGCT-TG--G
i Elaphurus_davidianus.JRFZ01104969.1                    I 8 C 0
s Ellobius_lutescens.LOEQ01008920.1                          22650 7 -    110024 TGTT-CA--T
i Ellobius_lutescens.LOEQ01008920.1                      I 7 C 0
s Ellobius_talpinus.LOJH01081419.1                            2570 7 +      8657 TGCT-CA--T
i Ellobius_talpinus.LOJH01081419.1                       I 7 C 0
s Eptesicus_fuscus.JH977646.1                              2148710 7 -  14770903 tgtt-tG--G
i Eptesicus_fuscus.JH977646.1                            I 8 C 0
s Erythrocebus_patas.Contig38                             21208805 7 -  21539334 TGCT-TG--G
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12863 7 +    133382 TGCT-TG--G
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 8 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             26809 7 -     44125 TGCT-TG--G
i Eubalaena_japonica.EubJap_flattened_line_31514         I 8 C 0
s Felis_catus.CM001381.2                                  20238714 7 + 206538554 TGCT-AA--G
i Felis_catus.CM001381.2                                 I 8 C 0
s Felis_catus_fca126.CM031415.1                           20197589 7 + 205367284 TGCT-AA--G
i Felis_catus_fca126.CM031415.1                          I 8 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 11249 7 -     36744 TGCT-AA--G
i Felis_nigripes.FelNig_flattened_line_20823             I 8 C 0
s Fukomys_damarensis.KN121974.1                             852166 4 +   3816255 ---C-AG--G
i Fukomys_damarensis.KN121974.1                          I 5 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               3990 7 -      9135 TGCT-TG--G
i Galeopterus_variegatus.GalVar_scaffold_108840          I 8 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     610820 7 -    660261 TGCT-TG--G
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 8 C 0
s Glis_glis.GliGli_scaffold_19807                            32960 7 +     49224 TGCT-GA--C
i Glis_glis.GliGli_scaffold_19807                        I 8 C 0
s Gorilla_beringei.k141_3596273                              19647 7 -     32273 TTCT-TG--G
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341783 7 + 186649187 TTCT-TG--G
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   34977 7 +     78134 TGCT-GA--T
i Graphiurus_murinus.GraMur_scaffold_10447               I 8 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243959 7 +    327341 TGCT-AA--G
i Helogale_parvula.HelPar_flattened_line_2585            I 7 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 20024 7 +     36099 TACT-TG--G
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 8 C 0
s Heterocephalus_glaber.JH602082.1                        20663802 7 +  22651954 TGTT-TA--G
i Heterocephalus_glaber.JH602082.1                       I 8 C 0
s Hipposideros_armiger.JXIK01000431.1                       112048 7 +   1711038 TGTT-TG--G
i Hipposideros_armiger.JXIK01000431.1                    I 8 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188                613 7 +      9903 TGTT-TG--G
i Hipposideros_galeritus.HipGal_scaffold_101188          I 8 C 0
s Hoolock_leuconedys.ctg274                                    438441 7 +    630532 TGCT-TG--G
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46697 7 +     55795 TGCT-AA--G
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 8 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23488 7 -    143317 AGTT-TA--G
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 8 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84735 7 +    135385 TGCT-CA--G
i Hystrix_cristata.HysCri_scaffold_5660                  I 8 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7522638 7 -   7955117 CGCT-TT--C
i Ictidomys_tridecemlineatus.JH393364.1                  I 8 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                 638 7 -     31341 TGCT-TA--G
i Inia_geoffrensis.IniGeo_flattened_line_34779           I 8 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                  387 7 -     18011 TGCT-TG--G
i Kogia_breviceps.KogBre_flattened_line_81059            I 8 C 0
s Lagothrix_lagothricha.k141_1005387                         16072 7 -     38430 TGCC-TG--G
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    18354 7 -     42476 TGTT-TG--G
i Lasiurus_borealis.LasBor_scaffold_32767                I 68 I 15
s Lipotes_vexillifer.KE559953.1                             269689 7 -    662738 TGCT-TG--G
i Lipotes_vexillifer.KE559953.1                          I 8 C 0
s Lophocebus_aterrimus.ctg367                              1440763 7 +   1826925 TGCT-TG--G
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17957148 7 -  59628241 TGCT-TA--G
i Lycaon_pictus.CM007581.1                               I 8 C 0
s Macaca_arctoides.k141_2326796                              10573 7 +     40492 TGCT-TG--G
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679827 7 +  60120075 TGCT-TG--G
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16344 7 -     26193 TGCT-TG--G
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            84120 7 -    114318 TGCT-TG--G
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9811 7 -     23192 TGCT-TG--G
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19275 7 -     29190 TGCT-TG--G
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27853 7 +     37952 TGCT-TG--G
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842930 7 + 187317192 TGCT-TG--G
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461508 7 -  25927173 TGCT-TG--G
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83709 7 +     89720 TGCT-TG--G
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10702 7 +     20474 TGCT-TG--G
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10499 7 -     14993 TGCT-TG--G
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333361 7 -    668171 TGCT-TG--G
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8811 7 -     24072 TGCT-TG--G
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29442 7 -     45290 TGCT-TG--G
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92374 7 +     94391 TGCT-TG--G
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 8 C 0
s Mandrillus_leucophaeus.scaffold280                      23941030 7 -  24302211 TGCT-TG--G
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355146 7 +    752769 TGCT-TG--G
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33104928 7 -  40650429 CGCT-TT--C
i Marmota_marmota.CZRN01000018.1                         I 8 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        14863 7 -    207569 TATT-TG--A
i Megaderma_lyra.MegLyr_scaffold_4542                    I 8 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 34902 7 +    140813 TACT-CA--C
i Meriones_unguiculatus.MerUng_scaffold_7390             I 8 C 0
s Mesocricetus_auratus.KB708134.1                         12184360 7 -  29670104 TGCT-CA--C
i Mesocricetus_auratus.KB708134.1                        I 42 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    5073 7 +     10310 TGCT-TG--G
i Mesoplodon_bidens.MesBid_scaffold_108144               I 8 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                17745 7 -     19307 CATT-TG--G
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 8 C 0
s Microtus_ochrogaster.CM001695.1                         11262624 7 -  27267610 TGCT-CA--T
i Microtus_ochrogaster.CM001695.1                        I 7 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1851938 7 +   8254450 ggtg-TG--G
i Miniopterus_natalensis.LDJU01000034.1                  I 8 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             35621 7 +     64694 GGTG-TG--G
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 7 C 0
s Miopithecus_ogouensis.k141_534055                          12710 7 -     28506 TGCT-TG--G
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    28800 7 -    437263 TGCT-TG--G
i Monodon_monoceros.MonMon_M_scaffold_103                I 8 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 143336 7 -    366855 TATT-TG--A
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 8 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   2860 7 +     82753 TGCT-TG--G
i Moschus_moschiferus.MosMos_scaffold_13123              I 8 C 0
s Murina_feae.MurFea_scaffold_85699                           8673 7 +     14753 TGTT-TG--G
i Murina_feae.MurFea_scaffold_85699                      I 7 C 0
s Mus_caroli.LT608237.1                                   84363293 6 - 120012414 -TGT-CA--G
i Mus_caroli.LT608237.1                                  I 8 C 0
s Mus_musculus.chr8                                       87652793 6 - 129401213 -TGT-CA--G
i Mus_musculus.chr8                                      I 8 C 0
s Mus_pahari.LT608297.1                                   31357505 6 -  89631738 -tgt-CA--G
i Mus_pahari.LT608297.1                                  I 12 C 0
s Mus_spretus.CM004101.1                                  90755282 6 - 130317789 -TGT-CA--G
i Mus_spretus.CM004101.1                                 I 8 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              6458 4 +     14296 TGCT------
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 8 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     73071 7 -     80779 TGTT-TA--G
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 8 C 0
s Myotis_brandtii.KE162005.1                                282414 7 -  10118263 tgtt-TA--G
i Myotis_brandtii.KE162005.1                             I 8 C 0
s Myotis_davidii.KB100139.1                                1589730 7 -   6019432 tgtt-TG--G
i Myotis_davidii.KB100139.1                              I 8 C 0
s Myotis_lucifugus.GL429869.1                              3905846 7 -   4330536 tgtt-TG--G
i Myotis_lucifugus.GL429869.1                            I 8 C 0
s Myotis_myotis.MyoMyo_scaffold_983608                         270 7 +       323 TGTT-TG--G
i Myotis_myotis.MyoMyo_scaffold_983608                   I 136 C 0
s Nannospalax_galili.KL204047.1                            2037073 9 -   3037898 TGCT-TAGCC
i Nannospalax_galili.KL204047.1                          I 7 C 0
s Nasalis_larvatus.k141_413338                               18760 7 +     21681 TGCT-TG--G
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5867764 7 +   7148211 tgcT-TG--G
i Neophocaena_asiaeorientalis.KZ687982.1                 I 8 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    759522 7 +    783361 TACT-TG--C
i Noctilio_leporinus.NocLep_scaffold_251                 I 8 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9151085 7 -   9404916 TGCT-TA--G
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 8 C 0
s Ochotona_princeps.JH802162.1                             1365950 8 +   3988456 TACTTGG--C
i Ochotona_princeps.JH802162.1                           I 8 C 0
s Odocoileus_virginianus.KZ100018.1                         146365 7 +    630418 TGCT-TG--G
i Odocoileus_virginianus.KZ100018.1                      I 8 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          78721 7 -    150152 TGCT-TG--G
i Okapia_johnstoni.LVCL01S0005463.1                      I 8 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   27291 7 +     28053 TGCT-CA--T
i Ondatra_zibethicus.OndZib_scaffold_46174               I 7 C 0
s Orcinus_orca.KB316932.1                                  2783665 7 -  10937097 tgct-TG--G
i Orcinus_orca.KB316932.1                                I 8 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       464169 7 -    559221 TGCT-TA--G
i Otocyon_megalotis.JAEUCK010005147.1                    I 8 C 0
s Ovis_aries.CM001607.2                                   17587986 7 +  44047080 CACT-TG--G
i Ovis_aries.CM001607.2                                  I 8 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      175978 7 -    191736 CACT-TG--G
i Ovis_canadensis.OviCan_scaffold_2572                   I 8 C 0
s Pan_paniscus.KQ411613.1                                    47748 7 +     80009 TTCT-TG--G
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.KZ622849.1                                 25937 7 +    110857 TTCT-TG--G
i Pan_troglodytes.KZ622849.1                             I 117 I 55
s Panthera_onca.PanOnc_flattened_line_3271                  152788 7 +    230217 TGCT-AA--G
i Panthera_onca.PanOnc_flattened_line_3271               I 8 C 0
s Panthera_pardus.KV860321.1                                266099 7 +  18783137 TGCT-AA--G
i Panthera_pardus.KV860321.1                             I 8 C 0
s Panthera_tigris.KE722367.1                               4722925 7 -   8748460 TGCT-AA--G
i Panthera_tigris.KE722367.1                             I 8 C 0
s Pantholops_hodgsonii.KE114653.1                          1266887 7 -   2937107 TACT-TG--G
i Pantholops_hodgsonii.KE114653.1                        I 8 C 0
s Papio_anubis.CM001495.2                                183446836 7 + 183742232 TGCT-TG--G
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10486 7 +     20448 TGCT-TG--G
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567294 7 +  20919399 TGCT-TG--G
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   9226 7 +     41871 TGCT-TG--G
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12519 7 +     27711 TGCT-TG--G
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3518 7 -     11374 TGCT-TG--G
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14232 7 -     78924 TGCT-AA--G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 8 C 0
s Peromyscus_maniculatus.KI615324.1                       18197413 7 -  18517816 TGCT-CA--C
i Peromyscus_maniculatus.KI615324.1                      I 8 C 0
s Petromus_typicus.PetTyp_scaffold_221660                      535 6 -      2102 TGTT-CA---
i Petromus_typicus.PetTyp_scaffold_221660                I 8 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              10725 7 +     63832 TGCT-TG--G
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 8 C 0
s Piliocolobus_badius.k141_1142974                            1837 7 +     68526 TGCT-TG--G
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        41983 7 +     89929 TGCT-TG--G
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43397 7 +     51399 TGCT-TG--G
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299634 7 -  14605196 TGCT-TG--G
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3479 7 +     22620 CGTC-TG--G
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 8 C 0
s Pithecia_albicans.k141_1476471                              5283 7 +     26961 TGCC-TG--G
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1428 7 +     23417 TGCC-TG--G
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                5275 7 +     29694 TGCC-TG--G
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          30301 7 +     52772 TGCC-TG--G
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           5297 7 +     26198 TGCC-TG--G
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3941845 7 +   4542175 TGCC-TG--G
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            5261 7 -     23490 TGCC-TG--G
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610             42 7 +      7680 TGCT-TG--G
i Platanista_gangetica.PlaMin_flattened_line_173610      I 8 C 0
s Plecturocebus_bernhardi.k141_2549090                        9516 7 -     39866 TGCC-TG--G
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18682 7 +     34906 TGCC-TG--G
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       22944 7 +     87950 TGCC-TG--G
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23773 7 +     88961 TGCC-TG--G
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9444 7 +     39403 TGCC-TG--G
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          23225 7 -     87928 TGCC-TG--G
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         30184 7 +     60166 TGCC-TG--G
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30381 7 +     67232 TGCC-TG--G
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          25854 7 +     90634 TGCC-TG--G
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          23226 7 -     89403 TGCC-TG--G
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189134755 7 + 189387572 ATCT-TG--G
i Pongo_abelii.CM009266.2                                I 56 I 15
s Pongo_pygmaeus.ctg66                                     9574364 7 +   9816681 ATCT-TG--G
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76937 7 -     81375 TGCT-TG--G
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8754 7 +     19060 TGCT-TG--G
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            12543 7 -     21651 TGCT-CA--C
i Psammomys_obesus.NESX01036370.1                        I 8 C 0
s Pteronotus_parnellii.KE909381.1                            16817 7 -     21811 TATT-TG--G
i Pteronotus_parnellii.KE909381.1                        I 8 C 0
s Pteropus_alecto.KB030862.1                              22978456 8 +  28871421 TGCT-TGG-G
i Pteropus_alecto.KB030862.1                             I 8 C 0
s Pteropus_vampyrus.KN525825.1                             1361468 1 +   4952924 ---------N
i Pteropus_vampyrus.KN525825.1                           I 1745 C 0
s Puma_concolor.QAVW01001104.1                            20275984 7 -  38429054 TGCT-AA--G
i Puma_concolor.QAVW01001104.1                           I 8 C 0
s Pygathrix_cinerea.k141_1153803                             18746 7 -     91421 TGCT-TG--G
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612869 7 +   7812017 TGCT-TG--G
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18776 7 -     72585 TGCT-TG--G
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  8196 7 +     55207 TGCT-TG--T
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 8 C 0
s Rattus_norvegicus.chr16                                 53572793 6 +  90668790 -TGT-CA--C
i Rattus_norvegicus.chr16                                I 8 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        368502 7 -   3329780 TGTT-TG--G
i Rhinolophus_sinicus.LVEH01000134.1                     I 8 C 0
s Rhinopithecus_bieti.k119_217274                            10444 7 -     11128 TGCT-TG--G
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239812 7 - 195417433 TGCT-TG--G
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675459 7 +   7961872 TGCT-TG--A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89528 7 -     96226 TGCT-TG--G
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 8 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154801 7 -    313613 TGGT-TG--G
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 7 C 0
s Semnopithecus_entellus.k141_1672505                         3618 7 -     12572 TGCT-TG--G
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30470 7 +     39453 TGCT-TG--G
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           10978 7 +     27826 TGCT-TG--G
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10519 7 -     19483 TGCT-TG--G
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3817 7 -     12762 TGCT-TG--G
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3662 7 +     13763 TGCT-TG--G
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     2424 7 -     30804 TGCT-TA--G
i Sigmodon_hispidus.SigHis_scaffold_42075                I 8 C 0
s Sorex_araneus.JH798187.1                                13652634 6 -  18376816 TGTT-T---T
i Sorex_araneus.JH798187.1                               I 8 C 0
s Spermophilus_dauricus.KZ294078.1                         1955795 7 -   3870691 CGCT-TT--C
i Spermophilus_dauricus.KZ294078.1                       I 8 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              19952 7 -    196729 TGCT-AA--G
i Suricata_suricatta.SurSur_flattened_line_6629          I 7 C 0
s Sus_scrofa.CM000828.4                                    6813329 7 +  69701581 ttct-TG--G
i Sus_scrofa.CM000828.4                                  I 8 I 4
s Tadarida_brasiliensis.TadBra_scaffold_25820                12860 7 +     41958 TGGT-TG--G
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 8 C 0
s Tarsius_lariang.k141_2201908                               27416 6 +     70052 TGCT-T---G
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                2213 6 -     16117 TGCT-T---G
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186432142 7 + 186847797 TGCT-TG--G
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              107209 7 +    114563 TGTT-CA--G
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 8 C 0
s Tolypeutes_matacus.TolMat_scaffold_85600                    2792 7 +     18632 ttta-tg--g
i Tolypeutes_matacus.TolMat_scaffold_85600               N 0 I 1690
s Tonatia_saurophila.TonSau_scaffold_294                     83090 7 +    610378 TATT-TG--G
i Tonatia_saurophila.TonSau_scaffold_294                 I 8 C 0
s Trachypithecus_auratus.k141_722599                         14556 7 -     20410 TGCT-TG--G
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3679 7 -     12674 TGCT-TG--G
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14664 7 +     19930 TGCT-TG--G
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      11066 7 -     19997 TGCT-TG--G
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            51207 7 -     60166 TGCT-TG--G
i Trachypithecus_geei.k141_277701                        I 29 C 0
s Trachypithecus_germaini.k141_912491                        18670 7 -     27529 TGCT-TG--G
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                        302 7 +      9229 TGCT-TG--G
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          12204 7 -     21137 TGCT-TG--G
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                     304 7 +      9131 TGCT-TG--G
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                          268 7 -      3730 TGCT-TG--G
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28536 7 +     32220 TGCT-TG--G
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942633 7 +   6242583 TGCT-TG--G
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11885 7 +     20839 TGCT-TG--G
i Trachypithecus_pileatus.k141_2007326                   I 29 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    2114 7 +     27266 TACT-TG--G
i Tragulus_javanicus.TraJav_scaffold_40725               I 8 C 0
s Tupaia_chinensis.KB320699.1                              2157759 7 +   4065304 TGCT-TA--G
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_306982                     182 7 -      4186 TGCT-TA--G
i Tupaia_tana.TupTan_flattened_line_306982               C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15739916 7 +  33153633 TGCT-TG--G
i Tursiops_truncatus.MRVK01000835.1                      I 8 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54917 7 -     77625 TTGT-TG--G
i Uropsilus_gracilis.UroGra_scaffold_12083               I 8 C 0
s Vicugna_pacos.KN270157.1                                 5373620 7 -   5488506 tgct-tG--G
i Vicugna_pacos.KN270157.1                               I 8 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 12613 7 -     43706 TGCT-TA--G
i Vulpes_lagopus.VulLag_flattened_line_30954             I 8 C 0
s Xerus_inauris.XerIna_scaffold_2302                          2779 7 +    224448 CATT-TG--C
i Xerus_inauris.XerIna_scaffold_2302                     I 8 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      16457 7 +     63895 TGCT-TG--G
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 8 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_761354             228 7 -      1267 TGCT-TG--G
i Ziphius_cavirostris.ZipCav_flattened_line_761354       I 8 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202 0 +      8798 C
e Galago_senegalensis.k141_631886                             7400 0 +     11339 C
e Galago_moholi.ctg2040                                     429710 0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964 2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445 0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734 0 -     33856 C
e Perodicticus_potto.k141_1186926                              597 0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219 0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                        67149665 1414 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Onychomys_torridus.OnyTor_scaffold_2986                    82703 0 +    102263 C
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Octodon_degus.JH651603.1                                  749216 44 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869 0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414 0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947 0 - 196305487 C
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Mungos_mungo.MunMun_flattened_line_23663                   36398 7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Manis_pentadactyla.KN006162.1                              52445 9 -    317179 I
e Manis_javanica.JSZB01003497.1                              20301 9 +    737560 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     8427 743 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Jaculus_jaculus.JH725527.1                               8278673 121 -   9596543 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689 0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11668671 0 + 224834208 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538 0 +      5281 C
e Allactaga_bullata.AllBul_scaffold_9566                     75924 121 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T

a score=0.000000
s hg38.chrUn_KI270753v1                                      10409 15 +     62944 CCTGTCA----TTCC-GATA
s Acinonyx_jubatus.LLWD01001279.1                           828977 15 -   1699592 CCTACCA----TTAT-AATA
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     72891  9 +     87051 TA----------ACC-AATG
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   18269 15 -     52922 CCTATCA----TTCC-AATA
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         18206 15 -     28001 CCTGTCA----TTCC-AGTA
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8701 15 -     18505 CCTGTCA----TTCC-AATA
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9554 15 -     12518 CCTGTCA----TTCC-AATA
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             10010 15 +     51355 CCTGTCA----TTCT-AGTC
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                3117 15 -     36483 CCTGTCA----TTCT-AGTC
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13570 15 +     28687 CCTGTCA----TTCT-AGTC
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 2042 15 +     27940 CCTGTCA----TTCT-AGTC
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            3121 15 -      9457 CCTGTCA----TTCT-AGTC
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             2079 15 +     30492 CCTGTCA----TTCT-AGTC
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              6074 15 +     47717 CCTGTCA----TTCT-AGTC
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              2810 15 +      5663 CCTGTCA----TTCT-AGTC
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             17261 15 +     50774 CCTGTCA----TTCT-AGTC
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          677709 15 -   2318259 CCCATGG----TTTT-TCTG
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      187254  1 +    412891 C-------------------
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 2
s Antilocapra_americana.AntAmePen_scaffold_12469            100184 15 -    100397 CCCACGG----TTCT-ACTG
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      14316 15 +     20879 CCTATCA----TCCT-AATG
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6661  1 +     43469 C-------------------
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 2
s Ateles_geoffroyi_b.tarseq_1536                             21210275 15 -  21539123 CCCGTCA----TTCT-AATC
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               45071 15 -     48001 CCCGTCA----TTCT-AATC
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 27875 15 -     30947 CCCGTCA----TTCT-AATC
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9647 15 -     89868 CCCGTCA----TTCT-AATC
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              14031 15 -     40414 CCCGTCA----TTCT-AATC
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                21920 15 +     72325 CCCGTCA----TTCT-AATC
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193557 15 +  23207421 CCCGTCA----TTCT-ACTG
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         4022 15 -     18090 CCCGTCA----TTCT-ACTG
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    28793 15 +     34529 CTCATGG----TTTT-TCTG
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    202796 15 -    288883 CCCATGG----TTTT-TCTG
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20276036 15 +  48749331 CCCATGG----TTTT-TCTG
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1128589 15 -   1948126 CCCATGG----TTTT-TCTG
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18086674 15 +  45695690 CCCATGG----TTTT-TCTG
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2822634 15 +   4408762 CCCATGG----TTTT-TCTG
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                102897 15 -    122966 CCCGTCA----TTCT-GGTC
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   62400 15 +     81800 CCCGTCA----TTCT-GGTC
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31582 15 -     95584 CCCGTCA----TTCT-GGTC
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55683 15 -    119600 CCCGTCA----TTCT-GGTC
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10004106 15 -  17673402 CCTACCA----TTCT-GCTG
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2336578 15 -   7040546 CCTACCA----TTCT-GCTG
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  404876 15 -   1652518 CCTACCA----TTCT-GCTG
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17801001 15 -  60362399 CCTATCA----TTAT-AATG
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     1744 15 -     43241 CCTATCA----TTAT-AATG
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9036444 15 -   9314153 CCTATCA----TTAT-AATG
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17960915 15 -  59632846 CCTATCA----TTAT-AATG
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18502217 15 +  63665305 CCTATCA----TTAT-AATG
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18831815 15 +  46296322 CCCATGG----TTTT-TCTG
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18062535 15 -  44709034 CCCATGG----TTTT-TCTG
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    2888 15 -     12242 CCTATCG----TTCT-AATG
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           156926 15 -    496798 CATGTCG----GTCT-ACTT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                7005  1 -     11696 C-------------------
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 2
s Castor_canadensis.CasCan_scaffold_2074                    138865 15 +    179628 CCTACCA----TTCT-AATG
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     95753 11 +    217609 ----TGA----TCCT-ACTG
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18351443 15 -  23392119 CCTATCA----GTCT-AATA
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18363703 15 -  23407841 CCTATCA----GTCT-AATA
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                       102585 15 +    143979 CCTATCA----GTCT-AATA
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         6425 15 +     31688 CCTGTCA----GTCT-ACTT
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4479228 15 +   4669795 CCTATCA----TTCC-AAGA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3722 15 +     17872 CCTATCA----TTCC-AAGA
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4317 15 -     14043 CCCATCA----TTCC-AAGA
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12412 15 +     27781 CCCATCA----TTCC-AAGA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12566 15 -     20310 CCTATCA----TTCC-AATA
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15542 15 +     29689 CCTATCA----TTCC-AATA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10302 15 -     20078 CCTATCA----TTCC-AATA
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          18217 15 -     27936 CCTATCA----TTCC-AATA
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            7088 15 -     17152 CCTATCA----TTCC-AATA
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826812 15 +  39242232 CCTCTCA----TTCC-AATA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226320 15 -  21565898 CCTATCA----TTCC-AATA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43439 15 -     53127 CCTATCA----TTCC-AATA
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3689 15 +     13442 CCTCTCA----TTCC-AATA
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       18235 15 -     27947 CCTATCA----TTCC-AATA
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1264 15 +     10558 CCTATCA----TTCC-AATA
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4269 15 +     14005 CCTATCA----TTCC-AATA
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            6414  1 -      8501 G-------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       I 1695 I 2
s Cheracebus_lucifer.k141_49986                               1501 15 -     17098 CCTGTCA----TTCT-AGTC
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1377 15 +     17877 CCTGTCA----TTCT-AGTC
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            158944 15 -    216457 CCTGTCA----TTCT-AGTC
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63419 15 +     76511 CCTGTCA----TTCT-AGTC
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254546 15 +   2543920 CTGATCA----TTCT-AGTA
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_israelita.k141_747660                          100026 15 +    146308 CCCGTCA----TTCT-AGTC
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          31833 15 -     50570 CCTGTCA----TTCT-AGTC
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18432139 15 -  18827391 CCTGTCA----TTCC-AATA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18636 15 -     50209 CCTGTCA----TTCC-AATA
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425640 15 + 135778131 CCTGTCA----CTCC-AATA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1914141 15 +   2368649 CCTATCA----TTCC-AATA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952389 15 + 200372422 CCTATCA----TTCC-AATA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40662 15 +     84244 CCTATCA----TTCC-AATA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17549952  1 -  53390261 G-------------------
i Condylura_cristata.JH655891.1                          C 0 I 974
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           2012 15 +     23735 CCTGTCA----TTCT-ACTG
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 52146  9 +     63868 TA----------ACA-AATG
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_239572              3397  1 -      5012 T-------------------
i Crocidura_indochinensis.CroInd_scaffold_239572         C 0 n 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             30159 15 -     87169 CCAACCA----TTAT-AATG
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37821 15 +     51376 CCTATCA----TTCT-AATG
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900             1520 15 -     75252 CCCATCA----GTCT-AATG
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            69436  1 +   2246927 g-------------------
i Dasypus_novemcinctus.JH564415.1                        I 1659 I 2
s Delphinapterus_leucas.KZ290073.1                        16813424 15 +  35494412 CCCATCA----TTCT-ACTG
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8632006  1 +  20541912 C-------------------
i Desmodus_rotundus.KZ672289.1                           C 0 I 2
s Dinomys_branickii.DinBra_scaffold_21862                    38029 15 +     67921 CTTATCG----GTCT-AATG
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 35160 15 -     42551 CCTATTA----GTCT-AATA
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.AWHC01278734.1                                214 15 +      2334 CCTGTCA----TCCT-ACAG
i Eidolon_helvum.AWHC01278734.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       313581 15 +    607251 CCCGTGG----TTTT-TCTG
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          22657  9 -    110024 TA----------GCA-AATG
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                            2577  9 +      8657 TA----------GCA-AATG
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2148717 15 -  14770903 CCTTTCA----TTCT-ATGG
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Erythrocebus_patas.Contig38                             21208812 15 -  21539334 CCTGTCA----TTCC-AATA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12870 15 +    133382 CCCGTCA----TTCT-ACTG
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             26816 15 -     44125 CCCGTCA----TTCT-ACTG
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20238721 15 + 206538554 CCTACCA----TTAT-AATA
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20197596 15 + 205367284 CCTACCA----TTAT-AATA
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 11256 15 -     36744 CCTACCA----TTAT-AATA
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             852170 15 +   3816255 CCTATCA----TCCA-ACTG
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               3997 15 -      9135 CCTGTGA----TTAT-AATG
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     610827 15 -    660261 CCCATGG----TTCT-ACTG
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            32967 15 +     49224 TCTATCA----TTCT-AATG
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              19654 15 -     32273 CCTGTCA----TTCC-GATA
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341790 15 + 186649187 CCTGTCA----TTCC-GATA
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   34984 15 +     78134 TCTGTCA----TTCT-AATG
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243966 15 +    327341 CCAACCA----TTAT-AATG
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 20031 15 +     36099 CCCATGG----TTTT-TCTG
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20663809 15 +  22651954 CCTATCA----TATA-ACTG
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       112055 15 +   1711038 CCCATCA----TGCT-ACTG
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188                620 15 +      9903 CCCGTCA----TGCT-ACTG
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 C 0
s Hoolock_leuconedys.ctg274                                    438448 15 +    630532 CCTGTCA----TTCC-AATA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46704 15 +     55795 CCGACCA----TTAT-AATG
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23495 15 -    143317 CCTATTA----GTCT-AATA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84742 15 +    135385 CCTGTCA----CTCT-AACG
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7522645 15 -   7955117 CCTGCCA----TTCT-AATG
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                 645 15 -     31341 CCCATCA----TTCT-ACTG
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                  394 15 -     18011 CCCATCA----TTCT-ACTG
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         16079 15 -     38430 CCCGTCA----TTCT-AATC
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_50988                    17100 15 +     29960 CCTTTCA----TTCT-ATGG
i Lasiurus_borealis.LasBor_scaffold_50988                I 15 I 299
s Lipotes_vexillifer.KE559953.1                             269696 15 -    662738 CCCATCA----TTCT-ACTG
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1440770 15 +   1826925 CCTATCG----TTCC-AATA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17957155 15 -  59628241 CCTATCA----TTAT-AATG
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                              10580 15 +     40492 CCTATCA----TTCC-AATA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679834 15 +  60120075 CCTATCA----TTCC-AATA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16351 15 -     26193 CCTATCA----TTCC-AATA
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            84127 15 -    114318 CCTATCA----TTCC-AATA
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9818 15 -     23192 CCTATCT----TTCC-AATA
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19282 15 -     29190 CCTATCA----TTCC-AATA
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27860 15 +     37952 CCTATCA----TTCC-AATA
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842937 15 + 187317192 CCTATCT----TTCC-AATA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461515 15 -  25927173 CCTATCA----TTCC-AATA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83716 15 +     89720 CCTATCA----TTCC-AATA
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10709 15 +     20474 CCTATCA----TTCC-AATA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10506 15 -     14993 CCTATCA----TTCC-AATA
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333368 15 -    668171 CCTATCA----TTCC-AATA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8818 15 -     24072 CCTATCA----TTCC-AATA
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29449 15 -     45290 CCTATCA----TTCC-AATA
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92381 15 +     94391 CCTGTCA----TCTT-ACAG
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23941037 15 -  24302211 CCTATCA----TTCC-AATA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355153 15 +    752769 CCTATCA----TTCC-AAGA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33104935 15 -  40650429 CCTGCCA----TTCT-AATG
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        14870 19 -    207569 CCTGTCATTCATTCT-ACTG
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 34909  9 +    140813 TA----------ACA-AATG
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12184367  9 -  29670104 TA----------ACA-AACA
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    5080 15 +     10310 CCCATCA----TTCT-ACTG
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                17752  1 -     19307 C-------------------
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 2
s Microtus_ochrogaster.CM001695.1                         11262631  9 -  27267610 TA----------GCA-AATG
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1851945  7 +   8254450 CCTTTCA-------------
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             35628  7 +     64694 CCTTTCA-------------
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                          12717 15 -     28506 CCTATCA----TTCC-AATA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    28807 15 -    437263 CCCATGA----TTCT-ACTG
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 143343  1 -    366855 C-------------------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 2
s Moschus_moschiferus.MosMos_scaffold_13123                   2867 15 +     82753 CCCATGG----ATTT-TCTG
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           8680 15 +     14753 CCTTTCA----CTCT-ACCG
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84363299  9 - 120012414 TA----------ACA-AATG
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87652799  9 - 129401213 TA----------ACA-AATG
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31357511  9 -  89631738 TA----------ACA-AATG
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90755288  9 - 130317789 TA----------ACA-AATG
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              6462 13 +     14296 --TGTCA----TGCT-CATG
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     73078 15 -     80779 CCTATCA----CTCT-AATG
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                282421 15 -  10118263 CCTTTTA----TTCT-ACCG
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1589737 15 -   6019432 CCTTTCA----TTCT-ACCG
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3905853 15 -   4330536 CCTTTCA----TTCT-ACCG
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_983608                         277 15 +       323 CCTTTCA----TTCT-ACCG
i Myotis_myotis.MyoMyo_scaffold_983608                   C 0 C 0
s Nannospalax_galili.KL204047.1                            2037082  9 -   3037898 TA----------GTG-AATG
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               18767 15 +     21681 CCTATCA----TTCC-AATA
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5867771 15 +   7148211 CCCATCA----TTCT-ACTG
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    759529  1 +    783361 T-------------------
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 2
s Nyctereutes_procyonoides.CAJHUB010000658.1               9151092 15 -   9404916 CCTATCA----TTAT-AATG
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Ochotona_princeps.JH802162.1                             1365958 15 +   3988456 CAGCTTA----TGCT-TGTG
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         146372 15 +    630418 CCCATGG----TTTT-TCTG
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          78728 15 -    150152 CCCATGG----TTCT-ACTG
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   27298  9 +     28053 TA----------GCA-AATG
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Orcinus_orca.KB316932.1                                  2783672 15 -  10937097 CCCATCA----TTCT-ACTG
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       464176 15 -    559221 CCTATCA----TTAT-AATG
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17587993 15 +  44047080 CCCATGG----TTTT-TCTG
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      175985 15 -    191736 CCCGTGG----TTTT-TCTG
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    47755 15 +     80009 CCTGTCA----TTCT-GATA
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146616 15 + 189151597 CCTGTCA----TTCC-GATA
i Pan_troglodytes.CM009242.2                             I 6 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152795 15 +    230217 CCTACCA----TTAT-AATA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                266106 15 +  18783137 CCTACCA----TTAT-AATA
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4722932 15 -   8748460 CCTACCA----TTAT-AATA
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1266894 15 -   2937107 CCCGTGG----TTTT-TCTG
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183446843 15 + 183742232 CCTATCG----TTCC-AATA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10493 15 +     20448 CCTATCG----TTCC-AATA
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567301 15 +  20919399 CCTATCG----TTCC-AATA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   9233 15 +     41871 CCTATCG----TTCC-AATA
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12526 15 +     27711 CCTATCG----TTCC-AATA
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3525 15 -     11374 CCTATCG----TTCC-AATA
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14239 14 -     78924 CATA-CA----TGAT-GATG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18197420  9 -  18517816 TA----------ACA-AATA
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_221660                      541 15 -      2102 CCTGCCA----TCCT-AACC
i Petromus_typicus.PetTyp_scaffold_221660                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              10732 15 +     63832 CCCATCA----TTCT-ACTG
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            1844 15 +     68526 CCTATCA----TTCC-AATA
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        41990 15 +     89929 CCTATCA----TTCC-AATA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43404 15 +     51399 CCTATCA----TTCC-AATA
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299641 15 -  14605196 CCTATCA----TTCC-AATA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3486 15 +     22620 CCTTTCA----TTCT-AAGG
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pithecia_albicans.k141_1476471                              5290 15 +     26961 CCTGTCA----TTCT-AGTC
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1435 15 +     23417 CCTGTCA----TTCT-AGTC
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                5282 15 +     29694 CCTGTCA----TTCT-AGTC
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          30308 15 +     52772 CCTGTCA----TTCT-AGTC
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           5304 15 +     26198 CCTGTCA----TTCT-AGTC
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3941852 15 +   4542175 CCTGTCA----TTCT-AGTC
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            5268 15 -     23490 CCTGTCA----TTCT-AGTC
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610             49 15 +      7680 CCCATCA----TTCT-ACTG
i Platanista_gangetica.PlaMin_flattened_line_173610      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9523 15 -     39866 TCTGTCA----TTCT-AGTC
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18689 15 +     34906 TCTGTCA----TTCT-AGTC
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       22951 15 +     87950 TCTGTCA----TTCT-AGTC
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23780 15 +     88961 TCTGTCA----TTCT-AGTC
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9451 15 +     39403 TCTGTCA----TTCT-AGTC
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          23232 15 -     87928 TCTGTCA----TTCT-AGTC
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         30191 15 +     60166 TCTGTCA----TTCT-AGTC
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30388 15 +     67232 TCTGTCA----TTCT-AGTC
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          25861 15 +     90634 TCTGTCA----TTCT-AGTC
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          23233 15 -     89403 TCTGTCA----TTCT-AGTC
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.NDHI03003595.1                                 5595 16 -     34550 CCTGTCG----TTCCTAATA
i Pongo_abelii.NDHI03003595.1                            I 7 I 117
s Pongo_pygmaeus.ctg66                                     9574371 15 +   9816681 CCTGTCG----TTCC-AATA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76944 15 -     81375 CCTATCA----TTCC-AATA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8761 15 +     19060 CCTATCA----TTCC-AATA
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            12550  9 -     21651 TA----------ACA-AATG
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            16824  1 -     21811 C-------------------
i Pteronotus_parnellii.KE909381.1                        C 0 I 2
s Pteropus_alecto.KB030862.1                              22978464 15 +  28871421 CCTGACA----TCCT-ACAG
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1361469 15 +   4952924 NNNNNNN----NNNN-NNNN
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20275991 15 -  38429054 CCTACCA----TTAT-AATA
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             18753 15 -     91421 CCTATCA----TTCC-AATA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612876 15 +   7812017 CCTATCA----TTCC-AATA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18783 15 -     72585 CCTATCA----TTCC-AATA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  8203 15 +     55207 CCCATGG----TTTT-TCTG
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53572799  9 +  90668790 TA----------ACT-AATG
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        368509 15 -   3329780 CCTGTCA----TTCC-ACTG
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                            10451 15 -     11128 CCTATCA----TTCC-AATA
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239819 15 - 195417433 CCTATCA----TTCC-AATA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675466 15 +   7961872 CCTATCA----TTCC-AATA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89535 15 -     96226 CTTGTCA----TCCT-ACAG
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    154808  1 -    313613 T-------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 432
s Semnopithecus_entellus.k141_1672505                         3625 15 -     12572 CCTATCA----TTCC-AATA
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30477 15 +     39453 CCTATCA----TTCC-AATA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           10985 15 +     27826 CCTATCA----TTCC-AATA
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10526 15 -     19483 CCTATCA----TTCC-AATA
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3824 15 -     12762 CCTATCA----TTCC-AATA
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3669 15 +     13763 CCTATCA----TTCC-AGTA
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     2431  9 -     30804 TA----------CCA-GATG
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Sorex_araneus.JH798187.1                                13652640  1 -  18376816 T-------------------
i Sorex_araneus.JH798187.1                               C 0 I 429
s Spermophilus_dauricus.KZ294078.1                         1955802 15 -   3870691 CCTGCCA----TTCT-AATG
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              19959  7 -    196729 CCAACAA-------------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 118
s Sus_scrofa.CM000828.4                                    6813340 11 +  69701581 ----TCA----TTCT-ACTG
i Sus_scrofa.CM000828.4                                  I 4 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                12867 15 +     41958 CCTTTCA----TTCT-AGGG
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tarsius_lariang.k141_2201908                               27422 15 +     70052 CCTGTCA----CTCT-ACTT
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                2219 15 -     16117 CCTGTCA----CTCT-ACTT
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186432149 15 + 186847797 CCTATCG----TTCC-AATA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              107216 15 +    114563 CCTACCA----TCCT-AATC
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_85600                    4489  1 +     18632 G-------------------
i Tolypeutes_matacus.TolMat_scaffold_85600               I 1690 I 2
s Tonatia_saurophila.TonSau_scaffold_294                     83097  1 +    610378 C-------------------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 2
s Trachypithecus_auratus.k141_722599                         14563 15 -     20410 CCTATCA----TTCC-AATA
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3686 15 -     12674 CCTATCA----TTCC-AATA
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14671 15 +     19930 CCTATCA----TTCC-AATA
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      11073 15 -     19997 CCTATCA----TTCC-AATA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            51214 15 -     60166 CCTATCA----TTCC-AATA
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18677 15 -     27529 CCTATCA----TTCC-AATA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                        309 15 +      9229 CCTATCA----TTCC-AATA
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          12211 15 -     21137 CCTATCA----TTCC-AATA
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                     311 15 +      9131 CCTATCA----TTCC-AATA
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                          275 15 -      3730 CCTATCA----TTCC-AATA
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28543 15 +     32220 CCTATCA----TTCC-AATA
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942640 15 +   6242583 CCTATCA----TTCC-AATA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11892 15 +     20839 CCTATCA----TTCC-AATA
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    2121 15 +     27266 CCCAGCA----TTCT-ACTG
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tupaia_chinensis.KB320699.1                              2157766 15 +   4065304 CCCAACA----CTCT-AGCA
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_306982                     189 15 -      4186 CCTAACA----CTCT-AGCA
i Tupaia_tana.TupTan_flattened_line_306982               C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15739923 15 +  33153633 CCCATCA----TTCT-ACTG
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   54924  1 -     77625 T-------------------
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 394
s Vicugna_pacos.KN270157.1                                 5373627 15 -   5488506 CCTACCA----TTCT-GCTG
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 12620 15 -     43706 CCTATCA----TTAT-AATG
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          2786 15 +    224448 CCTGTCA----TTCC-AATG
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      16464 15 +     63895 CCTACTG----TACA-AACG
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_761354             235 15 -      1267 CCCATCA----TTCT-ACTG
i Ziphius_cavirostris.ZipCav_flattened_line_761354       C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                        67149665 1414 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Onychomys_torridus.OnyTor_scaffold_2986                    82703  0 +    102263 C
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Octodon_degus.JH651603.1                                  749216 44 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Manis_pentadactyla.KN006162.1                              52445  9 -    317179 I
e Manis_javanica.JSZB01003497.1                              20301  9 +    737560 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     8427 743 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Jaculus_jaculus.JH725527.1                               8278673 121 -   9596543 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Allactaga_bullata.AllBul_scaffold_9566                     75924 121 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T

a score=0.000000
s hg38.chrUn_KI270753v1                                      10424 12 +     62944 ATCCAAGATCC-------------A
s Acinonyx_jubatus.LLWD01001279.1                           828992 12 -   1699592 ATCCAGGATCT-------------G
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     72900 13 +     87051 GTCCAGGATCC-C-----------C
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   18284 12 -     52922 ATCCAAGATCC-------------A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         18221 12 -     28001 ATCCAAGATCC-------------A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8716 12 -     18505 ATCCAAGATCC-------------A
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9569 12 -     12518 ATCCAAGATCC-------------A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             10025 12 +     51355 AGCCAAGAGCC-------------A
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                3132 12 -     36483 AGCCAAGAGCC-------------A
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13585 12 +     28687 AGCCAAGAGCC-------------A
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 2057 12 +     27940 AGCCAAGAGCC-------------A
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            3136 12 -      9457 AGCCAAGAGCC-------------A
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             2094 12 +     30492 AGCCAAGAGCC-------------A
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              6089 12 +     47717 AGCCAAGAGCC-------------A
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              2825 12 +      5663 AGCCAAGAGCC-------------A
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             17276 12 +     50774 AGCCAAGAGCC-------------A
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          677724 12 -   2318259 ATCCACGATTC-------------C
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469            100199 12 -    100397 ATCCAGGATTC-------------C
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      14331 12 +     20879 ATCCAGGATTC-------------C
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21210290 12 -  21539123 AGCCAAGAGCC-------------A
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               45086 12 -     48001 AGCCAAGAGCC-------------A
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 27890 12 -     30947 AGCCAAGAGCC-------------A
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9662 12 -     89868 AGCCAAGAGCC-------------A
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              14046 12 -     40414 AGCCAAGAGCC-------------A
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                21935 12 +     72325 AGCCAAGAGCC-------------A
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193572 12 +  23207421 ATCCAGGATTC-------------C
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         4037 12 -     18090 ATCCAGGATTC-------------C
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    28808 12 +     34529 ATCTGGGATTT-------------C
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    202811 12 -    288883 ATCCGGGATTC-------------C
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20276051 12 +  48749331 ATCCGGGATTC-------------C
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1128604 12 -   1948126 ATCCGGGATTC-------------C
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18086689 12 +  45695690 ATCCGGGATTC-------------C
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2822649 12 +   4408762 ATCCGGGATTC-------------C
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                102912 12 -    122966 ATCCAGGAGCC-------------A
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   62415 12 +     81800 ATCCAGGAGCC-------------A
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31597 12 -     95584 ATCCAGGAGCC-------------A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55698 12 -    119600 ATCCAGGAGCC-------------A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10004121 12 -  17673402 TCCCAGGATTC-------------C
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2336593 12 -   7040546 TCCCAGGATTC-------------C
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  404891 12 -   1652518 TCCCAGGATTC-------------C
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17801016 12 -  60362399 ATCCAGCTTCT-------------G
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     1759 12 -     43241 ATCCAGCTTCT-------------G
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9036459 12 -   9314153 ATCCAGCTTCT-------------G
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17960930 12 -  59632846 ATCCAGCTTCT-------------G
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18502232 12 +  63665305 ATCCAGCTTCT-------------G
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18831830 12 +  46296322 ATCCGCGATTC-------------C
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18062550 12 -  44709034 ATCCGCGATTC-------------C
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    2903 12 -     12242 ATGTAGGATGC-------------C
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           156941 10 -    496798 GGCCAATAT---------------C
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138880 12 +    179628 ATCCAGGATCC-------------C
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     95764 12 +    217609 ATCCAGGATTC-------------C
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18351458 12 -  23392119 ATCCAGCACAG-------------C
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18363718 12 -  23407841 ATCCAGCACAG-------------C
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                       102600 12 +    143979 ATCCAGCACAG-------------C
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         6440 10 +     31688 GGCCAATAT---------------C
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4479243 12 +   4669795 ATCCAAGATCC-------------A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3737 12 +     17872 ATCCAAGATCC-------------A
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4332 12 -     14043 ATCCAAGATCC-------------A
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12427 12 +     27781 ATCCAAGATCC-------------A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12581 12 -     20310 ATCCAAGATCC-------------A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15557 12 +     29689 ATCCAAGATCC-------------A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10317 12 -     20078 ATCCAAGATCC-------------A
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          18232 12 -     27936 ATCCAAGATCC-------------A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            7103 12 -     17152 ATCCAAGATCC-------------A
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826827 12 +  39242232 ATCCAAGATCC-------------A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226335 12 -  21565898 ATCCAAGATCC-------------A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43454 12 -     53127 ATCCAAGATCC-------------A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3704 12 +     13442 ATCCAAGATCC-------------A
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       18250 12 -     27947 ATCCAAGATCC-------------A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1279 12 +     10558 ATCCAAGATCC-------------A
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4284 12 +     14005 ATCCAAGATCC-------------A
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1516 12 -     17098 ATCCAGGAGCC-------------A
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1392 12 +     17877 ATCCAGGAGCC-------------A
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            158959 12 -    216457 ATCCAGGAGCC-------------A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63434 12 +     76511 ATTCAGGAGCC-------------A
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254561 12 +   2543920 GTCTAGAATAC-------------T
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_israelita.k141_747660                          100041 12 +    146308 ATCCAGGAGCC-------------A
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          31848 12 -     50570 ATCCAGGAGCC-------------A
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18432154 12 -  18827391 ATCCAAGATCC-------------A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18651 12 -     50209 ACCCAAGATCC-------------A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425655 12 + 135778131 ATCCAAGATCC-------------A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1914156 12 +   2368649 ATCCAAGATCC-------------A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952404 12 + 200372422 ATCCAAGATCC-------------A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40677 12 +     84244 ATCCAAGATCC-------------A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           2027 12 +     23735 ACCTAGAATCC-------------C
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 I 2
s Cricetomys_gambianus.CriGam_scaffold_18520                 52155 12 +     63868 GACCAGGATTC-------------C
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             30174 12 -     87169 ATCCAGGATCT-------------G
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37836 12 +     51376 ACATACGATGC-------------C
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900             1535 12 -     75252 ACCTAGGACAC-------------C
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16813439 12 +  35494412 ATCCAGGATTC-------------C
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    38044 12 +     67921 ATCTAGGACAC-------------C
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 35175 12 -     42551 ATCTAGCACAG-------------C
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.AWHC01278734.1                                229 12 +      2334 ATCCAGGATCC-------------C
i Eidolon_helvum.AWHC01278734.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       313596 12 +    607251 ATCTGGGATTC-------------C
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          22666 12 -    110024 GTCCAGGATCT-------------C
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                            2586 12 +      8657 GTCCAGGATCT-------------C
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2148732 12 -  14770903 ATCCAGGATTC-------------c
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Erythrocebus_patas.Contig38                             21208827 12 -  21539334 ATCCAAGATCC-------------A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12885 12 +    133382 ATCCAGGATTC-------------C
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             26831 12 -     44125 ATCCAGGAGTC-------------C
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20238736 12 + 206538554 ATCCAGGATCT-------------G
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20197611 12 + 205367284 ATCCAGGATCT-------------G
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 11271 12 -     36744 ATCCAGGATCT-------------G
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             852185 12 +   3816255 AGCCAGTATTC-------------C
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               4012 12 -      9135 ATCCAAGGCTC-------------C
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     610842 11 -    660261 ATCCGGGATTC--------------
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            32982 12 +     49224 ATCCAAGATTC-------------C
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              19669 12 -     32273 ATCCAAGATCC-------------A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341805 12 + 186649187 ATCCAAGATCC-------------A
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   34999 12 +     78134 ATGCGGGATTC-------------C
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               243981 12 +    327341 ATCCAGGATCT-------------G
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 20046 12 +     36099 ATCCGCGATTC-------------C
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20663824 12 +  22651954 AGCTAGGATTC-------------C
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       112070 12 +   1711038 ATTCTGGGTCT-------------C
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188                635 12 +      9903 ATTCTGGGTGT-------------C
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 C 0
s Hoolock_leuconedys.ctg274                                    438463 12 +    630532 ATCCAAGATTC-------------A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46719 12 +     55795 ATCCAGGATCT-------------G
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23510 12 -    143317 ATCTAGCACAG-------------C
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84757 12 +    135385 GTCAAGGGTCC-------------C
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7522660 12 -   7955117 ATCCAGGATCC-------------C
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                 660 12 -     31341 ATCCAGGATTC-------------C
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                  409 12 -     18011 ATCCAGGATTC-------------C
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         16094 12 -     38430 AGCCAAGAGCC-------------A
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    18376 12 -     42476 AAGCAGGATTC-------------C
i Lasiurus_borealis.LasBor_scaffold_32767                I 15 C 0
s Lipotes_vexillifer.KE559953.1                             269711 12 -    662738 ATTCAGGATTC-------------C
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1440785 12 +   1826925 ATCCAAGATCC-------------A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17957170 12 -  59628241 ATCCAGCTTCT-------------G
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                              10595 12 +     40492 ATCCAAGATCC-------------A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679849 12 +  60120075 ATCCAAGATCC-------------A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16366 12 -     26193 ATCCAAGATCC-------------A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            84142 12 -    114318 ATCCAAGATCC-------------A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9833 12 -     23192 ATCCAAGATCC-------------A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19297 12 -     29190 ATCCAAGATCC-------------A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27875 12 +     37952 ATCCAAGATCC-------------A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842952 12 + 187317192 ATCCAAGATCC-------------A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461530 12 -  25927173 ATCCAAGATCC-------------A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83731 12 +     89720 ATCCAAGATCC-------------A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10724 12 +     20474 ATCCAAGATCC-------------A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10521 12 -     14993 ATCCAAGATCC-------------A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333383 12 -    668171 ATCCAAGATCC-------------A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8833 12 -     24072 ATCCAAGATCC-------------A
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29464 12 -     45290 ATCCAAGATCC-------------A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92396 12 +     94391 ATCAAGGATCC-------------C
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23941052 12 -  24302211 ATCCAAGATCC-------------A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355168 12 +    752769 ATCCAAGATCC-------------A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33104950 12 -  40650429 ATCCAGGATCC-------------C
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        14889 25 -    207569 ATCCAGGACCCACCCCCGCCCCCAC
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 34918 12 +    140813 GTCCAAGATCC-------------C
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12184376 12 -  29670104 GCCGAGGGTCC-------------C
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    5095 12 +     10310 ATCCAGGATTC-------------C
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11262640 12 -  27267610 GTCCAGGATCT-------------C
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1851952  6 +   8254450 ------GATCC-------------C
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             35635  6 +     64694 ------GATCC-------------C
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                          12732 12 -     28506 ATCCAAGATCC-------------A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    28822 12 -    437263 ATCCAGAATTC-------------C
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   2882 12 +     82753 ATCCAGGATTC-------------T
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           8695 12 +     14753 ATCCAGGATCC-------------C
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84363308 12 - 120012414 GTCCAGGATCC-------------C
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87652808 12 - 129401213 GTCCAGGATCC-------------G
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31357520 12 -  89631738 GTTCAGGGTCC-------------C
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90755297 12 - 130317789 GTCCAGGATCC-------------G
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              6475 12 +     14296 ATCTAGGATTC-------------C
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     73093 12 -     80779 ATGTAGGATGC-------------C
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                282436 12 -  10118263 ATCTAGGATTC-------------C
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1589752 12 -   6019432 ATCCAGGATTC-------------C
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3905868 12 -   4330536 ATCTAGGATTC-------------C
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_983608                         292 12 +       323 ATCCAGGATTC-------------C
i Myotis_myotis.MyoMyo_scaffold_983608                   C 0 C 0
s Nannospalax_galili.KL204047.1                            2037091 12 -   3037898 GTCCAGGATCT-------------C
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               18782 12 +     21681 ATCCAAGATCC-------------A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5867786 12 +   7148211 ATCCAGGATTC-------------C
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9151107 11 -   9404916 ATCCAGCT-CT-------------G
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Ochotona_princeps.JH802162.1                             1365973 12 +   3988456 ATCCAGGAATC-------------C
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         146387 12 +    630418 ATCTAGGATTC-------------C
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          78743 12 -    150152 ATCTGGGATTC-------------C
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   27307 12 +     28053 GTCCAGGATCT-------------C
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Orcinus_orca.KB316932.1                                  2783687 12 -  10937097 ATCCAGGATTC-------------C
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       464191 12 -    559221 ATCCAGCTTCT-------------G
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17588008 12 +  44047080 ATCCGCGATTC-------------C
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      176000 12 -    191736 ATCCGCGATTC-------------C
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    47770 12 +     80009 ATCCAAGATCC-------------A
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146631 13 + 189151597 ATCCAAGATCC-C-----------A
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152810 12 +    230217 ATCCAGGATCT-------------G
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                266121 12 +  18783137 ATCCAGGATCT-------------G
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4722947 12 -   8748460 ATCCAGGATCT-------------G
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1266909 12 -   2937107 ATCCGCGATTC-------------C
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183446858 12 + 183742232 ATCCAAGATCC-------------A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10508 12 +     20448 ATCCAAGATCC-------------A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567316 12 +  20919399 ATCCAAGATCC-------------A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   9248 12 +     41871 ATCCAAGATCC-------------A
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12541 12 +     27711 ATCCAAGATCC-------------A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3540 12 -     11374 ATCCAAGATCC-------------A
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14253 12 -     78924 ATCCAGGATCT-------------G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18197429 12 -  18517816 GTCCAGGATCC-------------C
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_221660                      556 12 -      2102 ACTGAGGACCC-------------C
i Petromus_typicus.PetTyp_scaffold_221660                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              10747 12 +     63832 ATCCAGGATTC-------------C
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            1859 12 +     68526 ATCCAAGATCC-------------A
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        42005 12 +     89929 ATCCAAGATCC-------------A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43419 12 +     51399 ATCCAAGATCC-------------A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299656 12 -  14605196 ATCCAAGATCC-------------A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3501 12 +     22620 ACCCAGGATTC-------------C
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pithecia_albicans.k141_1476471                              5305 12 +     26961 ATCCAGGAGCC-------------A
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1450 12 +     23417 ATCCAGGAGCC-------------A
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                5297 12 +     29694 ATCCAGGAGCC-------------A
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          30323 12 +     52772 ATCCAGGAGCC-------------A
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           5319 12 +     26198 ATCCAGGAGCC-------------A
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3941867 12 +   4542175 ATCCAGGAGCC-------------A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            5283 12 -     23490 ATCCAGGAGCC-------------A
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610             64 12 +      7680 ATCCAGGATTC-------------C
i Platanista_gangetica.PlaMin_flattened_line_173610      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9538 12 -     39866 ATCCAGGAGCC-------------A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18704 12 +     34906 ATCCAGGAGCC-------------A
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       22966 12 +     87950 ATCCAGGAGCC-------------A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23795 12 +     88961 ATCCAGGAGCC-------------A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9466 12 +     39403 ATCCAGGAGCC-------------A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          23247 12 -     87928 ATCCAGGAGCC-------------A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         30206 12 +     60166 ATCCAGGAGCC-------------A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30403 12 +     67232 ATCCAGGAGCC-------------A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          25876 12 +     90634 ATCCAGGAGCC-------------A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          23248 12 -     89403 ATCCAGGAGCC-------------A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189134777 12 + 189387572 ATCCAAGATCC-------------A
i Pongo_abelii.CM009266.2                                I 15 C 0
s Pongo_pygmaeus.ctg66                                     9574386 12 +   9816681 ATCCAAGATCC-------------A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76959 12 -     81375 ATCCAAGATCC-------------A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8776 12 +     19060 ATCCAAGATCC-------------A
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            12559 12 -     21651 GTCCAGGATCC-------------C
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteropus_alecto.KB030862.1                              22978479 12 +  28871421 ATCCAGGATCC-------------C
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1361484 12 +   4952924 NNNNNNNNNNN-------------N
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20276006 12 -  38429054 ATCCAGGATCT-------------G
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             18768 12 -     91421 ATCCAAGATCC-------------A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612891 12 +   7812017 ATCCAAGATCC-------------A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18798 12 -     72585 ATCCAAGATCC-------------A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  8218 12 +     55207 ATCCAAGATTC-------------C
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53572808 12 +  90668790 GTCCAGATTCT-------------C
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        368524 12 -   3329780 ATCCAGGATCC-------------C
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                            10466 12 -     11128 ATCCAAGATCC-------------A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239834 12 - 195417433 ATCCAAGATCC-------------A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675481 12 +   7961872 ATCCAAGATCC-------------A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89550 12 -     96226 ATCCAGGATCC-------------C
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Semnopithecus_entellus.k141_1672505                         3640 12 -     12572 ATCCAAGATCC-------------A
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30492 12 +     39453 ATCCAAGATCC-------------A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           11000 12 +     27826 ATCCAAGATCC-------------A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10541 12 -     19483 ATCCAAGATCC-------------A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3839 12 -     12762 ATCCAAGATCC-------------A
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3684 12 +     13763 ATCCAAGATCC-------------A
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     2440 12 -     30804 GTCCAGGATCC-------------C
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1955817 12 -   3870691 ATCCAGGATCC-------------C
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              20084 12 -    196729 ctccaggctct-------------g
i Suricata_suricatta.SurSur_flattened_line_6629          I 118 I 157
s Sus_scrofa.CM000828.4                                    6813351 12 +  69701581 ATCCAGGATTC-------------C
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                12882 12 +     41958 ATCCAGGACCC-------------C
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tarsius_lariang.k141_2201908                               27437 10 +     70052 GGCCAATAT---------------T
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                2234 10 -     16117 GGCCAATAT---------------T
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186432164 12 + 186847797 ATGCAAGATCC-------------A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              107231 12 +    114563 ACTGAGGGTCC-------------C
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Trachypithecus_auratus.k141_722599                         14578 12 -     20410 ATCCAAGATCC-------------A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3701 12 -     12674 ATCCAAGATCC-------------A
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14686 12 +     19930 ATCCAAGATCC-------------A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      11088 12 -     19997 ATCCAAGATCC-------------A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            51229 12 -     60166 ATCCAAGATCC-------------A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18692 12 -     27529 ATCCAAGATCC-------------A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                        324 12 +      9229 ATCCAAGATCC-------------A
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          12226 12 -     21137 ATCCAAGATCC-------------A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                     326 12 +      9131 ATCCAAGATCC-------------A
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                          290 12 -      3730 ATCCAAGATCC-------------A
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28558 12 +     32220 ATCCAAGATCC-------------A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942655 12 +   6242583 ATCCAAGATCC-------------A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11907 12 +     20839 ATCCAAGATCC-------------A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    2136 12 +     27266 ATCTGGGATTC-------------C
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tupaia_chinensis.KB320699.1                              2157781 12 +   4065304 ACCCCAGAGCT-------------C
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_306982                     204 12 -      4186 ACCCCAGAGCT-------------C
i Tupaia_tana.TupTan_flattened_line_306982               C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15739938 12 +  33153633 ATCCAGGATTC-------------C
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Vicugna_pacos.KN270157.1                                 5373642 12 -   5488506 TCCCAGGATTC-------------C
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 12635 12 -     43706 ATCCAGCTTCT-------------G
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          2801 12 +    224448 ATCCAGGATCC-------------C
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      16479 12 +     63895 GTCTAGAAACG-------------C
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_761354             250 12 -      1267 ATCCAGGATTC-------------C
i Ziphius_cavirostris.ZipCav_flattened_line_761354       C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Uropsilus_gracilis.UroGra_scaffold_12083                   54925 394 -     77625 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tonatia_saurophila.TonSau_scaffold_294                     83098  2 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_85600                    4490  2 +     18632 I
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Sorex_araneus.JH798187.1                                13652641 429 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    154809 432 -    313613 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Pteronotus_parnellii.KE909381.1                            16825  2 -     21811 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                        67149665 1414 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Onychomys_torridus.OnyTor_scaffold_2986                    82703  0 +    102263 C
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Octodon_degus.JH651603.1                                  749216 44 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Noctilio_leporinus.NocLep_scaffold_251                    759530  2 +    783361 I
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 143344  2 -    366855 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Micronycteris_hirsuta.MicHir_scaffold_52381                17753  2 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Manis_pentadactyla.KN006162.1                              52445  9 -    317179 I
e Manis_javanica.JSZB01003497.1                              20301  9 +    737560 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     8427 743 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Jaculus_jaculus.JH725527.1                               8278673 121 -   9596543 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8632007  2 +  20541912 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            69437  2 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Crocidura_indochinensis.CroInd_scaffold_239572              3398  0 -      5012 I
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Condylura_cristata.JH655891.1                           17549953 974 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            6415  2 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Carollia_perspicillata.CarPer_scaffold_92756                7006  2 -     11696 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6662  2 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Anoura_caudifer.AnoCau_scaffold_1412                      187255  2 +    412891 I
e Allactaga_bullata.AllBul_scaffold_9566                     75924 121 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T

a score=0.000000
s hg38.chrUn_KI270753v1                                      10436 19 +     62944 TGTGA----------------------------------GTC-CA-CAA-GTCCAA
s Acinonyx_jubatus.LLWD01001279.1                           829004 20 -   1699592 CATGA----------------------------------GGC-CATCAG-ATGGTC
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 28
s Acomys_cahirinus.AcoCah_scaffold_12655                     72913 17 +     87051 CATGA----------------------------------GTC-CTTTAG-A---TC
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 6
s Allenopithecus_nigroviridis.k141_3361533                   18296 20 -     52922 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         18233 20 -     28001 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8728 20 -     18505 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9581 20 -     12518 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             10037 20 +     51355 CGTGA----------------------------------GTC-CATCAA-GTGCAA
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                3144 20 -     36483 CGTGA----------------------------------GTC-CATCAA-GTGCAA
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13597 20 +     28687 CGTGA----------------------------------GTC-CATCAA-GTGCAA
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 2069 20 +     27940 CGTGA----------------------------------GTC-CATCAA-GTGCAA
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            3148 20 -      9457 CGTGA----------------------------------GTC-CATCAA-GTGCAA
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             2106 20 +     30492 CGTGA----------------------------------GTC-CATCAA-GTGCAA
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              6101 20 +     47717 CGTGA----------------------------------GTC-CATCAA-GTGCAA
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              2837 20 +      5663 CGTGA----------------------------------GTC-CATCAA-GTGCAA
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             17288 20 +     50774 CGTGA----------------------------------GTC-CATCAA-GTGCAA
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          677736 23 -   2318259 CCGGA----G-AA--------------------------GGC-TGTCAG-ATTATC
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 34
s Antilocapra_americana.AntAmePen_scaffold_12469            100211 20 -    100397 CAGGA----------------------------------GGC-TGTCAG-ATTATC
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 I 17
s Aplodontia_rufa.AprRuf_scaffold_68852                      14343 20 +     20879 TGTAA----------------------------------GTC-TATCAG-ATGATC
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 24
s Ateles_geoffroyi_b.tarseq_1536                             21210302 20 -  21539123 TGTGA----------------------------------GTC-CCTCAA-GTGCAA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               45098 20 -     48001 TGTGA----------------------------------GTC-CCTCAA-GTACAA
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 27902 20 -     30947 TGTGA----------------------------------GTC-CCTCAA-GTGCAA
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9674 20 -     89868 TGTGA----------------------------------GTC-CCTCAA-GTGCAA
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              14058 20 -     40414 TGTGA----------------------------------GTC-CCTCAA-GTGCAA
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                21947 20 +     72325 TGTGA----------------------------------GTC-CCTCAA-GTGCAA
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193584 20 +  23207421 CAGGA----------------------------------TGC-TGTCAG-ATGATC
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 38
s Balaenoptera_bonaerensis.DF707048.1                         4049 20 -     18090 CAGGA----------------------------------TGC-TGTCAG-ATGATC
i Balaenoptera_bonaerensis.DF707048.1                    C 0 I 38
s Beatragus_hunteri.BeaHun_scaffold_50177                    28820 23 +     34529 CAGGA----G-AA--------------------------GGC-TGTCAG-ATTATC
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 33
s Bison_bison.KN261452.1                                    202823 23 -    288883 CAGGA----G-AA--------------------------GGC-TGTCAG-ATTATC
i Bison_bison.KN261452.1                                 C 0 I 37
s Bos_indicus.CM003047.1                                  20276063 23 +  48749331 CAGGA----G-AA--------------------------GGC-TGTCAG-ATTATC
i Bos_indicus.CM003047.1                                 C 0 I 37
s Bos_mutus.JH880303.1                                     1128616 23 -   1948126 CAGGA----G-AA--------------------------GGC-TGTCAG-ATTATC
i Bos_mutus.JH880303.1                                   C 0 I 37
s Bos_taurus.CM000203.6                                   18086701 23 +  45695690 CAGGA----G-AA--------------------------GGC-TGTCAG-ATTATC
i Bos_taurus.CM000203.6                                  C 0 I 37
s Bubalus_bubalis.KI419123.1                               2822661 23 +   4408762 CAGGA----G-AA--------------------------GGC-TGTCAG-ATTATC
i Bubalus_bubalis.KI419123.1                             C 0 I 37
s Cacajao_ayresi.k141_552049                                102924 20 -    122966 CGTGA----------------------------------GTC-CATGAG-GTGCAA
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   62427 20 +     81800 CGTGA----------------------------------GTC-CATGAG-GTGCAA
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31609 20 -     95584 CGTGA----------------------------------GTC-CATGAG-GTGCAA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55710 20 -    119600 CGTGA----------------------------------GTC-CATGAG-GTGCAA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10004133 20 -  17673402 CAGGA----------------------------------GGC-TGTCAG-ATGATG
i Camelus_bactrianus.KN276810.1                          C 0 I 28
s Camelus_dromedarius.KN272107.1                           2336605 20 -   7040546 CAGGA----------------------------------GGC-TGTCAG-ATGATG
i Camelus_dromedarius.KN272107.1                         C 0 I 28
s Camelus_ferus.KB017975.1                                  404903 20 -   1652518 CAGGA----------------------------------GGC-TGTCAG-ATGATG
i Camelus_ferus.KB017975.1                               C 0 I 28
s CanFam4.chr16                                           17801028 20 -  60362399 CACGA----------------------------------GGC-TGTCAG-ATATTC
i CanFam4.chr16                                          C 0 I 28
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     1771 20 -     43241 CACGA----------------------------------GGC-TGTCAG-ATATTC
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 I 28
s Canis_lupus_dingo.QKWQ01000480.1                         9036471 20 -   9314153 CACGA----------------------------------GGC-TGTCAG-ATATTC
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 28
s Canis_lupus_familiaris.chr16                            17960942 20 -  59632846 CACGA----------------------------------GGC-TGTCAG-ATATTC
i Canis_lupus_familiaris.chr16                           C 0 I 28
s Canis_lupus_orion.HG994398.1                            18502244 20 +  63665305 CACGA----------------------------------GGC-TGTCAG-ATATTC
i Canis_lupus_orion.HG994398.1                           C 0 I 28
s Capra_aegagrus.CM003241.1                               18831842 23 +  46296322 CCGGA----G-AA--------------------------GGC-TGTCAG-ATTATC
i Capra_aegagrus.CM003241.1                              C 0 I 33
s Capra_hircus.CM004588.1                                 18062562 23 -  44709034 CCGGA----G-AA--------------------------GGC-TGTCAG-ATTATC
i Capra_hircus.CM004588.1                                C 0 I 33
s Capromys_pilorides.CapPil_scaffold_65020                    2915 47 -     12242 CCCAATCCAG-AA--TGCC-CGTTCAAATCATCCA-T--GTC-TAGAGG-ATAAAA
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 9
s Carlito_syrichta.NW_007259797.1                           156951 20 -    496798 CACAA----------------------------------GTC-TATCAG-GTGATC
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138892 20 +    179628 CATGA----------------------------------GTC-TAGTGG-GTGATC
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 25
s Catagonus_wagneri.CatWag_scaffold_2839                     95776 20 +    217609 CAGGG----------------------------------GGC-TGTCAG-ATGGTC
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 31
s Cavia_aperea.AVPZ01000300.1                             18351470 50 -  23392119 CATGATCTAGGAA-AT-CC-A-TTCTAATGATCTAATTGGTC-GAGGAG-ATTTGA
i Cavia_aperea.AVPZ01000300.1                            C 0 I 9
s Cavia_porcellus.DS562891.1                              18363730 50 -  23407841 CATGATCTAGGAA-AT-CC-A-TTCTAATGATCTAATTGGTC-TAGGAG-ATTTGA
i Cavia_porcellus.DS562891.1                             C 0 I 9
s Cavia_tschudii.CavTsc_scaffold_8919                       102612 50 +    143979 CATGATCTAGGAA-AT-CC-A-TTCTAATGATCTAATTGGTC-TAGGAG-ATTTGA
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 I 9
s Cephalopachus_bancanus.k141_1423433                         6450 20 +     31688 CACAA----------------------------------GTC-TATCAG-GTGATC
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4479255 20 +   4669795 TGTGA----------------------------------GTC-CATCAG-GTCAAA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3749 20 +     17872 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4344 20 -     14043 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12439 20 +     27781 TGTGA----------------------------------GTC-CGTCAG-GTCAAA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12593 20 -     20310 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15569 20 +     29689 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10329 20 -     20078 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          18244 20 -     27936 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            7115 20 -     17152 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826839 20 +  39242232 TATGA----------------------------------GTC-CATCAA-GTCAAA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226347 20 -  21565898 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43466 20 -     53127 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3716 20 +     13442 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       18262 20 -     27947 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1291 20 +     10558 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4296 20 +     14005 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1528 20 -     17098 CGTGA----------------------------------GTC-CATCAG-GTGCAA
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1404 20 +     17877 CGTGA----------------------------------GTC-CATCAG-GTGCAA
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            158971 20 -    216457 CGTGA----------------------------------GTC-CATCAG-GTGCAA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63446 20 +     76511 CGTGA----------------------------------GTC-CATCAG-GTGCAA
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254573 48 +   2543920 -GTGatccaggct-ac-cc-a-ctctaACGGTTTCAT-GATC-TAGAAG-ATGAAA
i Chinchilla_lanigera.JH722012.1                         C 0 I 8
s Chiropotes_israelita.k141_747660                          100053 20 +    146308 CGTGA----------------------------------ATC-CATGAG-GTGCAA
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          31860 20 -     50570 CGTGA----------------------------------ATC-CATGAG-GTGCAA
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18432166 20 -  18827391 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18663 20 -     50209 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425667 20 + 135778131 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1914168 20 +   2368649 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952416 20 + 200372422 TGTGA----------------------------------GTC-CATCAA-ATCAAA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40689 20 +     84244 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           2041 12 +     23735 -------------------------------------------TGTCAG-ATGATC
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      I 2 I 22
s Cricetomys_gambianus.CriGam_scaffold_18520                 52167 17 +     63868 CACGA----------------------------------GTC-CTTCTA-A---CC
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 6
s Cryptoprocta_ferox.CryFer_flattened_line_16129             30186 20 -     87169 CATGA----------------------------------GGC-CATCAG-ATGGTC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 28
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37848 47 +     51376 CCTGATATAG-AATAC-CC-A-TTCTAATCATCCA---GGTC-CAGGAG-ATGAAA
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 9
s Dasyprocta_punctata.DasPun_flattened_line_15900             1547 49 -     75252 CATGATCTAGGAT-AC-CC-A-TTCTAATGATCTAAT-GGTC-TAGGAG-ACTTGA
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 9
s Delphinapterus_leucas.KZ290073.1                        16813451 20 +  35494412 CAGGA----------------------------------TGC-TGTCAG-GTGGTC
i Delphinapterus_leucas.KZ290073.1                       C 0 I 55
s Dinomys_branickii.DinBra_scaffold_21862                    38056 49 +     67921 CACAACCCAGGAT-AC-CC-A-CTCTAATGATCTCAT-GGTC-TAGGGG-ATGAAA
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 9
s Dolichotis_patagonum.DolPat_scaffold_30833                 35187 49 -     42551 CATGATCTAGGAA-GT-CC-A-TTCTAATGATCTAAT-AGTC-TAGGAG-ATTTGA
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 I 9
s Eidolon_helvum.AWHC01278734.1                                241 20 +      2334 CCTGA----------------------------------GGC-TGTCAG-ATGATC
i Eidolon_helvum.AWHC01278734.1                          C 0 I 30
s Elaphurus_davidianus.JRFZ01104969.1                       313608 23 +    607251 CAGGA----G-AA--------------------------GGC-TGTCAG-ATTATC
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 35
s Ellobius_lutescens.LOEQ01008920.1                          22678 16 -    110024 CCAAA----------------------------------GTC-CT-TAG-A---TC
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 6
s Ellobius_talpinus.LOJH01081419.1                            2598 16 +      8657 CCAAA----------------------------------GTC-CT-CAG-A---TC
i Ellobius_talpinus.LOJH01081419.1                       C 0 I 6
s Eptesicus_fuscus.JH977646.1                              2148744 19 -  14770903 t-taa----------------------------------ggc-tgtcag-ctgatc
i Eptesicus_fuscus.JH977646.1                            C 0 I 28
s Erythrocebus_patas.Contig38                             21208839 20 -  21539334 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12897 20 +    133382 CAGGA----------------------------------TGC-TGTCAG-ATGATC
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 38
s Eubalaena_japonica.EubJap_flattened_line_31514             26843 20 -     44125 CAGGA----------------------------------TGC-TGTCAG-ATGATC
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 I 38
s Felis_catus.CM001381.2                                  20238748 20 + 206538554 CATGA----------------------------------GGC-CATCAG-ATGGTC
i Felis_catus.CM001381.2                                 C 0 I 28
s Felis_catus_fca126.CM031415.1                           20197623 20 + 205367284 CATGA----------------------------------GGC-CATCAG-ATGGTC
i Felis_catus_fca126.CM031415.1                          C 0 I 28
s Felis_nigripes.FelNig_flattened_line_20823                 11283 20 -     36744 CATGA----------------------------------GGC-CATCAG-ATGGTC
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 28
s Fukomys_damarensis.KN121974.1                             852197 20 +   3816255 CATA-----G-----------------------------GTC-TAGTAA-ATTAGA
i Fukomys_damarensis.KN121974.1                          C 0 I 25
s Galeopterus_variegatus.GalVar_scaffold_108840               4024 20 -      9135 CATGA----------------------------------GTC-TATCAG-ATGATT
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 I 26
s Giraffa_tippelskirchi.LVKQ01S007888.1                     610853 19 -    660261 CAGGA----------------------------------GGC-TGTC-G-ATTATC
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 I 29
s Glis_glis.GliGli_scaffold_19807                            32994 20 +     49224 GATGA----------------------------------GTC-TGTCTG-ATGATC
i Glis_glis.GliGli_scaffold_19807                        C 0 I 25
s Gorilla_beringei.k141_3596273                              19681 19 -     32273 TGTGA----------------------------------GTC-CA-CAA-GTCCAA
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341817 19 + 186649187 TGTGA----------------------------------GTC-CA-CAA-GTCCAA
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   35011 20 +     78134 CATGA----------------------------------GTC-TGTTGG-ATGGTT
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 25
s Helogale_parvula.HelPar_flattened_line_2585               243993 20 +    327341 CAGGA----------------------------------GGC-CATCAG-ATGACC
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 28
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 20058 23 +     36099 CCGGA----G-AA--------------------------GGC-TGTCAG-ATTATC
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 I 29
s Heterocephalus_glaber.JH602082.1                        20663836 21 +  22651954 CATG-----G-----------------------------GTC-TAGTAGGATGAGG
i Heterocephalus_glaber.JH602082.1                       C 0 I 25
s Hipposideros_armiger.JXIK01000431.1                       112082 20 +   1711038 CCTGA----------------------------------GGC-TGTCAG-AGGGTC
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 28
s Hipposideros_galeritus.HipGal_scaffold_101188                647 20 +      9903 CCTGA----------------------------------GGT-TGTCAG-AGGGTC
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 I 28
s Hoolock_leuconedys.ctg274                                    438475 20 +    630532 TGTGA----------------------------------GCC-CATCAA-GTCCGA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46731 20 +     55795 CATGA----------------------------------GGC-CATTAG-ATGGTC
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 29
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23522 49 -    143317 CATGATCTAGGAA-GT-CC-A-CTCTAATGATCTAAT-GGTC-TAGGAC-ATTTGA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 9
s Hystrix_cristata.HysCri_scaffold_5660                      84769 20 +    135385 CCCGG----------------------------------ATC-TACCAG-ATGAGC
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 25
s Ictidomys_tridecemlineatus.JH393364.1                    7522672 20 -   7955117 TAGGA----------------------------------GTC-TGTCAG-ATGTCC
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 21
s Inia_geoffrensis.IniGeo_flattened_line_34779                 672 20 -     31341 CAGGA----------------------------------TGC-TGTCAG-ATGGTC
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 I 43
s Kogia_breviceps.KogBre_flattened_line_81059                  421 20 -     18011 CAGGA----------------------------------TGC-TGTCAG-ATGATC
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 I 37
s Lagothrix_lagothricha.k141_1005387                         16106 20 -     38430 CGTGA----------------------------------GTC-CCTCAA-GTGCAA
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    18388 19 -     42476 T-GGA----------------------------------GGC-TGTGTG-CTGATC
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 97
s Lipotes_vexillifer.KE559953.1                             269723 20 -    662738 CAGGA----------------------------------TGC-TGTCAG-ATGGTC
i Lipotes_vexillifer.KE559953.1                          C 0 I 44
s Lophocebus_aterrimus.ctg367                              1440797 20 +   1826925 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17957182 20 -  59628241 CACGA----------------------------------GGC-TGTCAG-ATATTC
i Lycaon_pictus.CM007581.1                               C 0 I 28
s Macaca_arctoides.k141_2326796                              10607 20 +     40492 TGTGA----------------------------------ATC-CATCAA-GTCAAA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679861 20 +  60120075 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16378 20 -     26193 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            84154 20 -    114318 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9845 20 -     23192 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19309 20 -     29190 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27887 20 +     37952 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842964 20 + 187317192 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461542 20 -  25927173 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83743 20 +     89720 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10736 20 +     20474 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10533 20 -     14993 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333395 20 -    668171 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8845 20 -     24072 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29476 20 -     45290 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92408 20 +     94391 CCTGA----------------------------------GGC-TGTCAG-ATGGTC
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 30
s Mandrillus_leucophaeus.scaffold280                      23941064 20 -  24302211 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355180 20 +    752769 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33104962 20 -  40650429 TATGA----------------------------------GTC-TGTCAG-ATGCTC
i Marmota_marmota.CZRN01000018.1                         C 0 I 21
s Megaderma_lyra.MegLyr_scaffold_4542                        14914 20 -    207569 CCCCA----------------------------------GCC-TGTGAG-CTGATC
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 28
s Meriones_unguiculatus.MerUng_scaffold_7390                 34930 17 +    140813 CATGG----------------------------------GTC-CTTTAG-A---TC
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 6
s Mesocricetus_auratus.KB708134.1                         12184388 16 -  29670104 CATAA----------------------------------GTG-CT-CAG-A---GC
i Mesocricetus_auratus.KB708134.1                        C 0 I 6
s Mesoplodon_bidens.MesBid_scaffold_108144                    5107 20 +     10310 CAGAA----------------------------------TGC-TGTCAG-ATGGTC
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 I 41
s Microtus_ochrogaster.CM001695.1                         11262652 16 -  27267610 CCAAA----------------------------------GTC-CT-TTG-A---TC
i Microtus_ochrogaster.CM001695.1                        C 0 I 6
s Miniopterus_natalensis.LDJU01000034.1                    1851958 17 +   8254450 C-GGA----------------------------------GGC-C--CAG-ATGATC
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 25
s Miniopterus_schreibersii.MinSch_scaffold_18080             35641 17 +     64694 C-GGA----------------------------------GGC-C--CAG-ATGATC
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 26
s Miopithecus_ogouensis.k141_534055                          12744 20 -     28506 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    28834 20 -    437263 CAGGA----------------------------------TGC-TGTCAG-ATGGTC
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 57
s Moschus_moschiferus.MosMos_scaffold_13123                   2894 23 +     82753 CAGGA----G-AA--------------------------GGC-TGTCAG-ATTATC
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 29
s Murina_feae.MurFea_scaffold_85699                           8707 19 +     14753 T-TGA----------------------------------GGC-TGTCAG-TTGATG
i Murina_feae.MurFea_scaffold_85699                      C 0 I 28
s Mus_caroli.LT608237.1                                   84363320 17 - 120012414 CATGA----------------------------------ATC-CTTTCC-A---TC
i Mus_caroli.LT608237.1                                  C 0 I 6
s Mus_musculus.chr8                                       87652820 17 - 129401213 CATGA----------------------------------ATC-CTTTCC-T---TC
i Mus_musculus.chr8                                      C 0 I 6
s Mus_pahari.LT608297.1                                   31357532 17 -  89631738 CGTGA----------------------------------ATC-CTTTCC-A---TT
i Mus_pahari.LT608297.1                                  C 0 I 6
s Mus_spretus.CM004101.1                                  90755309 17 - 130317789 CATGA----------------------------------ATC-CTTTCC-T---TC
i Mus_spretus.CM004101.1                                 C 0 I 6
s Muscardinus_avellanarius.MusAve_scaffold_82313              6487 20 +     14296 CATGA----------------------------------GTC-TGTCTA-ATGGTC
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 25
s Myocastor_coypus.MyoCoy_scaffold_10123                     73105 47 -     80779 CCTGAACCAG-AA--TGCCCA-TTCAAATCATC---CGGGTC-TAGGAG-ACGAAA
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 I 9
s Myotis_brandtii.KE162005.1                                282448 19 -  10118263 T-TGA----------------------------------GGC-TTTCAG-CTGATC
i Myotis_brandtii.KE162005.1                             C 0 I 28
s Myotis_davidii.KB100139.1                                1589764 19 -   6019432 T-TGA----------------------------------GGC-TGTCAG-GTGATC
i Myotis_davidii.KB100139.1                              C 0 I 28
s Myotis_lucifugus.GL429869.1                              3905880 19 -   4330536 T-TGA----------------------------------GGC-TGTCAG-CTGATC
i Myotis_lucifugus.GL429869.1                            C 0 I 28
s Myotis_myotis.MyoMyo_scaffold_983608                         304 19 +       323 T-TGA----------------------------------GGC-TGTCAG-CTGATC
i Myotis_myotis.MyoMyo_scaffold_983608                   C 0 N 0
s Nannospalax_galili.KL204047.1                            2037103 17 -   3037898 CATAA----------------------------------GGC-TCTCAG-A---TT
i Nannospalax_galili.KL204047.1                          C 0 I 26
s Nasalis_larvatus.k141_413338                               18794 20 +     21681 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5867798 20 +   7148211 CAGGA----------------------------------TGC-TGTCAG-ATGGTC
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 54
s Nyctereutes_procyonoides.CAJHUB010000658.1               9151118 20 -   9404916 CACGA----------------------------------GGC-TGTCAG-ATGTTC
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 28
s Ochotona_princeps.JH802162.1                             1365985  8 +   3988456 CAGGA----------------------------------GTA--------------
i Ochotona_princeps.JH802162.1                           C 0 I 7
s Odocoileus_virginianus.KZ100018.1                         146399 23 +    630418 CAGGA----G-AA--------------------------GGC-TGTCAG-ATTATC
i Odocoileus_virginianus.KZ100018.1                      C 0 I 45
s Okapia_johnstoni.LVCL01S0005463.1                          78755 19 -    150152 CAGGA----------------------------------GGC-TGTC-G-ATTATC
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 29
s Ondatra_zibethicus.OndZib_scaffold_46174                   27319 16 +     28053 CCAAA----------------------------------GTC-CT-CAG-A---TC
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 6
s Onychomys_torridus.OnyTor_scaffold_2986                    82703  9 +    102263 -----------------------------------------C-CT-CAG-A---AC
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 6
s Orcinus_orca.KB316932.1                                  2783699 20 -  10937097 CAGGA----------------------------------TGC-TGTCAG-ATGGTC
i Orcinus_orca.KB316932.1                                C 0 I 49
s Otocyon_megalotis.JAEUCK010005147.1                       464203 20 -    559221 CACGA----------------------------------GGC-TGTCAG-ATGTTC
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 28
s Ovis_aries.CM001607.2                                   17588020 23 +  44047080 CCGGA----G-AA--------------------------GGC-TGTCAG-ATTATC
i Ovis_aries.CM001607.2                                  C 0 I 34
s Ovis_canadensis.OviCan_scaffold_2572                      176012 23 -    191736 CCGGA----G-AA--------------------------GGC-TGTCAG-ATTATC
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 I 32
s Pan_paniscus.KQ411613.1                                    47782 19 +     80009 TGTGA----------------------------------GTC-CA-CAA-GTCCAA
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146644 19 + 189151597 TGTGA----------------------------------GTC-CA-CAA-GTCCAA
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152822 20 +    230217 CATGA----------------------------------GGC-CATCAG-ATGGTC
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 28
s Panthera_pardus.KV860321.1                                266133 20 +  18783137 CATGA----------------------------------GGC-CATCAG-ATGGTC
i Panthera_pardus.KV860321.1                             C 0 I 28
s Panthera_tigris.KE722367.1                               4722959 20 -   8748460 CATGA----------------------------------GGC-CATCAG-ATGGTC
i Panthera_tigris.KE722367.1                             C 0 I 28
s Pantholops_hodgsonii.KE114653.1                          1266921 23 -   2937107 CCGGA----G-AA--------------------------CGC-TGTCAG-ATTATC
i Pantholops_hodgsonii.KE114653.1                        C 0 I 30
s Papio_anubis.CM001495.2                                183446870 20 + 183742232 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10520 20 +     20448 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567328 20 +  20919399 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   9260 20 +     41871 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12553 20 +     27711 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3552 20 -     11374 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14265 20 -     78924 CCTGA----------------------------------GGC-CATCGG-ATGGTC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 28
s Peromyscus_maniculatus.KI615324.1                       18197441 16 -  18517816 CATAA----------------------------------GTC-CT-CAG-A---AC
i Peromyscus_maniculatus.KI615324.1                      C 0 I 6
s Petromus_typicus.PetTyp_scaffold_221660                      568 20 -      2102 ACTG----A------------------------------GTC-TAGTGG-ACGAAG
i Petromus_typicus.PetTyp_scaffold_221660                C 0 I 25
s Phocoena_phocoena.PhoPho_flattened_line_24159              10759 20 +     63832 CAGGA----------------------------------TGC-TGTCAG-ATGGTC
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 55
s Piliocolobus_badius.k141_1142974                            1871 20 +     68526 TGTGA----------------------------------GTC-CATCAG-GTCAAA
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        42017 20 +     89929 TGTGA----------------------------------GTC-CATCAG-GTCAAA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43431 20 +     51399 TGTGA----------------------------------GTC-CATCAG-GTCAAA
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299668 20 -  14605196 TGTGA----------------------------------GTC-CATCAG-GTCAAA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3513 19 +     22620 T-TGA----------------------------------GGT-TGTCAG-CGGATC
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 28
s Pithecia_albicans.k141_1476471                              5317 20 +     26961 CGTGA----------------------------------GTC-AATCAG-GTGCAA
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1462 20 +     23417 CGTGA----------------------------------GTC-AATCAG-GTGCAA
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                5309 20 +     29694 CGTGA----------------------------------GTC-AATCAG-GTGCAA
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          30335 20 +     52772 CGTGA----------------------------------GTC-AATCAG-GTGCAA
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           5331 20 +     26198 CGTGA----------------------------------GTC-AATCAG-GTGCAA
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3941879 20 +   4542175 CGTGA----------------------------------GTC-AATCAG-GTGCAA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            5295 20 -     23490 CGTGA----------------------------------GTC-AATCAG-GTGCAA
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610             76 20 +      7680 CAGGA----------------------------------TGC-TGTCAG-ATGGTC
i Platanista_gangetica.PlaMin_flattened_line_173610      C 0 I 42
s Plecturocebus_bernhardi.k141_2549090                        9550 19 -     39866 CGCGA----------------------------------GTC--ATCAG-GTGCAA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18716 19 +     34906 CGCGA----------------------------------GTC--ATCAG-GTGCAA
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       22978 19 +     87950 CGCGA----------------------------------GTC--ATCAG-GTGCAA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23807 19 +     88961 CGCGA----------------------------------GTC--ATCAG-GTGCAA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9478 19 +     39403 CGCGA----------------------------------GTC--ATCAG-GTGCAA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          23259 19 -     87928 CGCGA----------------------------------GTC--ATCAG-GTGCAA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         30218 19 +     60166 CGCGA----------------------------------GTC--ATCAG-GTGCAA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30415 19 +     67232 CGCGA----------------------------------GTC--ATCAG-GTGCAA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          25888 19 +     90634 CGCGA----------------------------------GTC--ATCAG-GTGCAA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          23260 19 -     89403 CGCGA----------------------------------GTC--ATCAG-GTGCAA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189134789 20 + 189387572 TGTGA----------------------------------ATC-CATCAA-GTCCAA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9574398 20 +   9816681 TGTGA----------------------------------ATC-CATCAA-GTCCAA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76971 20 -     81375 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8788 20 +     19060 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            12571 17 -     21651 CATGG----------------------------------GTC-CTTTAG-A---TC
i Psammomys_obesus.NESX01036370.1                        C 0 I 6
s Pteropus_alecto.KB030862.1                              22978491 20 +  28871421 CCTGA----------------------------------GAT-TGTCAG-ACGATC
i Pteropus_alecto.KB030862.1                             C 0 I 30
s Pteropus_vampyrus.KN525825.1                             1361496 20 +   4952924 NNNNN----------------------------------NNN-NNNNNN-NNNNNN
i Pteropus_vampyrus.KN525825.1                           C 0 I 30
s Puma_concolor.QAVW01001104.1                            20276018 20 -  38429054 CATGA----------------------------------GGC-CATCAG-ATAGTC
i Puma_concolor.QAVW01001104.1                           C 0 I 28
s Pygathrix_cinerea.k141_1153803                             18780 20 -     91421 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612903 20 +   7812017 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18810 20 -     72585 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  8230 23 +     55207 CAGGA----G-AA--------------------------GGC-TGTCAG-ATTATC
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 49
s Rattus_norvegicus.chr16                                 53572820 17 +  90668790 CATGA----------------------------------ATC-CTTCCC-A---TC
i Rattus_norvegicus.chr16                                C 0 I 6
s Rhinolophus_sinicus.LVEH01000134.1                        368536 20 -   3329780 CCTGA----------------------------------GGC-TGTCAG-ATGGTC
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 27
s Rhinopithecus_bieti.k119_217274                            10478 20 -     11128 TGTGA----------------------------------GTC-CATAAA-GTCAAA
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239846 20 - 195417433 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675493 20 +   7961872 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89562 20 -     96226 CCTGA----------------------------------GGC-TGTCAG-ATGATC
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 30
s Semnopithecus_entellus.k141_1672505                         3652 20 -     12572 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30504 20 +     39453 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           11012 20 +     27826 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10553 20 -     19483 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3851 20 -     12762 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3696 20 +     13763 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     2452 16 -     30804 CATAA----------------------------------GTC-CT-CAG-A---TC
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 I 6
s Spermophilus_dauricus.KZ294078.1                         1955829 20 -   3870691 TAGGA----------------------------------GTC-TGTCAG-ATGTTC
i Spermophilus_dauricus.KZ294078.1                       C 0 I 21
s Suricata_suricatta.SurSur_flattened_line_6629              20253 20 -    196729 TACAG----------------------------------GGT-CATCAG-ACGACC
i Suricata_suricatta.SurSur_flattened_line_6629          I 157 I 28
s Sus_scrofa.CM000828.4                                    6813363 20 +  69701581 CAGGG----------------------------------GGC-TGTCAG-ATGATC
i Sus_scrofa.CM000828.4                                  C 0 I 31
s Tadarida_brasiliensis.TadBra_scaffold_25820                12894 19 +     41958 C-TGA----------------------------------GGC-TGGCAG-GTGATC
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 27
s Tarsius_lariang.k141_2201908                               27447 20 +     70052 CACAA----------------------------------GTT-TATCAA-GTGATC
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                2244 20 -     16117 CACAA----------------------------------GTT-TATCAA-GTGATC
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186432176 20 + 186847797 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              107243 20 +    114563 TCGG----A------------------------------GTC-TAGTAG-ATGAGG
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 25
s Trachypithecus_auratus.k141_722599                         14590 20 -     20410 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3713 20 -     12674 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14698 20 +     19930 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      11100 20 -     19997 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            51241 20 -     60166 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18704 20 -     27529 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                        336 20 +      9229 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          12238 20 -     21137 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                     338 20 +      9131 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                          302 20 -      3730 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28570 20 +     32220 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942667 20 +   6242583 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11919 20 +     20839 TGTGA----------------------------------GTC-CATCAA-GTCAAA
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    2148 20 +     27266 CAGGA----------------------------------GGC-TGTCAG-ATTATC
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 I 29
s Tupaia_chinensis.KB320699.1                              2157793 20 +   4065304 TGTAA----------------------------------GTC-CATCTG-ACAGTC
i Tupaia_chinensis.KB320699.1                            C 0 I 26
s Tupaia_tana.TupTan_flattened_line_306982                     216 20 -      4186 GGTAA----------------------------------GTC-CATCTG-ACAGTC
i Tupaia_tana.TupTan_flattened_line_306982               C 0 I 26
s Tursiops_truncatus.MRVK01000835.1                       15739950 20 +  33153633 CAGGA----------------------------------TGC-TGTCAG-ATGGTC
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 50
s Vicugna_pacos.KN270157.1                                 5373654 20 -   5488506 CAGGA----------------------------------GGC-TGTCAG-ATGATG
i Vicugna_pacos.KN270157.1                               C 0 I 28
s Vulpes_lagopus.VulLag_flattened_line_30954                 12647 20 -     43706 CACGA----------------------------------GGC-TGTCAG-ATGTTC
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 28
s Xerus_inauris.XerIna_scaffold_2302                          2813 21 +    224448 CATGA----------------------------------GTCTTGTCAG-ATGATT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 24
s Zapus_hudsonius.ZapHud_scaffold_11398                      16491  9 +     63895 CATGT----------------------------------GTC-T------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_761354             262 20 -      1267 CAGAA----------------------------------TGC-TGTCAG-ATGGTC
i Ziphius_cavirostris.ZipCav_flattened_line_761354       C 0 I 41
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Uropsilus_gracilis.UroGra_scaffold_12083                   54925 394 -     77625 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tonatia_saurophila.TonSau_scaffold_294                     83098  2 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_85600                    4490  2 +     18632 I
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Sorex_araneus.JH798187.1                                13652641 429 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    154809 432 -    313613 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Pteronotus_parnellii.KE909381.1                            16825  2 -     21811 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                        67149665 1414 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Octodon_degus.JH651603.1                                  749216 44 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Noctilio_leporinus.NocLep_scaffold_251                    759530  2 +    783361 I
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 143344  2 -    366855 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Micronycteris_hirsuta.MicHir_scaffold_52381                17753  2 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Manis_pentadactyla.KN006162.1                              52445  9 -    317179 I
e Manis_javanica.JSZB01003497.1                              20301  9 +    737560 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     8427 743 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Jaculus_jaculus.JH725527.1                               8278673 121 -   9596543 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8632007  2 +  20541912 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            69437  2 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Crocidura_indochinensis.CroInd_scaffold_239572              3398  0 -      5012 I
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Condylura_cristata.JH655891.1                           17549953 974 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            6415  2 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Carollia_perspicillata.CarPer_scaffold_92756                7006  2 -     11696 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6662  2 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Anoura_caudifer.AnoCau_scaffold_1412                      187255  2 +    412891 I
e Allactaga_bullata.AllBul_scaffold_9566                     75924 121 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T

a score=0.000000
s hg38.chrUn_KI270753v1                                      10455 9 +     62944 GGAGCAAG-A
s Acinonyx_jubatus.LLWD01001279.1                           829052 9 -   1699592 AGGGCAAG-A
i Acinonyx_jubatus.LLWD01001279.1                        I 28 I 13
s Acomys_cahirinus.AcoCah_scaffold_12655                     72936 6 +     87051 ----CAAAAA
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 6 C 0
s Allenopithecus_nigroviridis.k141_3361533                   18316 9 -     52922 GGAGCAAG-A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         18253 9 -     28001 GGAGCAAG-A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8748 9 -     18505 GGAGCAAG-A
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9601 9 -     12518 GGAGCAAG-A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             10057 9 +     51355 AGAGCAAG-A
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                3164 9 -     36483 AGAGCAAG-A
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13617 9 +     28687 AGAGCAAG-A
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 2089 9 +     27940 AGAGCAAG-A
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            3168 9 -      9457 AGAGCAAG-A
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             2126 9 +     30492 AGAGCAAG-A
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              6121 9 +     47717 AGAGCAAG-A
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              2857 9 +      5663 AGAGCAAG-A
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             17308 9 +     50774 AGAGCAAG-A
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          677793 9 -   2318259 AGGGCAAG-A
i Ammotragus_lervia.NIVO01071767.1                       I 34 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469            100248 9 -    100397 AGGGGAAG-A
i Antilocapra_americana.AntAmePen_scaffold_12469         I 17 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      14387 9 +     20879 TGAGCAAG-A
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 24 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21210322 9 -  21539123 AGAGCAAG-A
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               45118 9 -     48001 AGAGCAAG-A
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 27922 9 -     30947 AGAGCAAG-A
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9694 9 -     89868 AGAGCAAG-A
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              14078 9 -     40414 AGAGCAAG-A
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                21967 9 +     72325 AGAGCAAG-A
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193642 9 +  23207421 aGGGCAAG-A
i Balaenoptera_acutorostrata.KI537508.1                  I 38 C 0
s Balaenoptera_bonaerensis.DF707048.1                         4107 9 -     18090 aGGGCAAG-A
i Balaenoptera_bonaerensis.DF707048.1                    I 38 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    28876 9 +     34529 AGGGCAAG-A
i Beatragus_hunteri.BeaHun_scaffold_50177                I 33 C 0
s Bison_bison.KN261452.1                                    202883 9 -    288883 AGAGTAAG-A
i Bison_bison.KN261452.1                                 I 37 C 0
s Bos_indicus.CM003047.1                                  20276123 9 +  48749331 AGAGTAAG-A
i Bos_indicus.CM003047.1                                 I 37 C 0
s Bos_mutus.JH880303.1                                     1128676 9 -   1948126 AGAGTAAG-A
i Bos_mutus.JH880303.1                                   I 37 C 0
s Bos_taurus.CM000203.6                                   18086761 9 +  45695690 AGAGTAAG-A
i Bos_taurus.CM000203.6                                  I 37 C 0
s Bubalus_bubalis.KI419123.1                               2822721 9 +   4408762 AGAGCAAG-A
i Bubalus_bubalis.KI419123.1                             I 37 C 0
s Cacajao_ayresi.k141_552049                                102944 9 -    122966 AGATCAAG-A
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   62447 9 +     81800 AGATCAAG-A
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31629 9 -     95584 AGATCAAG-A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55730 9 -    119600 AGATCAAG-A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10004181 9 -  17673402 agggcaag-a
i Camelus_bactrianus.KN276810.1                          I 28 C 0
s Camelus_dromedarius.KN272107.1                           2336653 9 -   7040546 agggcaag-a
i Camelus_dromedarius.KN272107.1                         I 28 C 0
s Camelus_ferus.KB017975.1                                  404951 9 -   1652518 agggcaag-a
i Camelus_ferus.KB017975.1                               I 28 C 0
s CanFam4.chr16                                           17801076 9 -  60362399 AGGGCAAG-A
i CanFam4.chr16                                          I 28 I 13
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     1819 9 -     43241 AGGGCAAG-A
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 28 I 13
s Canis_lupus_dingo.QKWQ01000480.1                         9036519 9 -   9314153 AGGGCAAG-A
i Canis_lupus_dingo.QKWQ01000480.1                       I 28 I 13
s Canis_lupus_familiaris.chr16                            17960990 9 -  59632846 AGGGCAAG-A
i Canis_lupus_familiaris.chr16                           I 28 I 13
s Canis_lupus_orion.HG994398.1                            18502292 9 +  63665305 AGGGCAAG-A
i Canis_lupus_orion.HG994398.1                           I 28 I 13
s Capra_aegagrus.CM003241.1                               18831898 9 +  46296322 AGGGCAAG-A
i Capra_aegagrus.CM003241.1                              I 33 C 0
s Capra_hircus.CM004588.1                                 18062618 9 -  44709034 AGGGCAAG-A
i Capra_hircus.CM004588.1                                I 33 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    2971 9 -     12242 GGAGCGAG-C
i Capromys_pilorides.CapPil_scaffold_65020               I 9 C 0
s Carlito_syrichta.NW_007259797.1                           156971 9 -    496798 TGGGGACG-G
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138937 9 +    179628 GAAGCAAA-A
i Castor_canadensis.CasCan_scaffold_2074                 I 25 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     95827 9 +    217609 AGGACAAG-A
i Catagonus_wagneri.CatWag_scaffold_2839                 I 31 C 0
s Cavia_aperea.AVPZ01000300.1                             18351529 9 -  23392119 GGAGCAAG-C
i Cavia_aperea.AVPZ01000300.1                            I 9 C 0
s Cavia_porcellus.DS562891.1                              18363789 9 -  23407841 GGAGCAAG-C
i Cavia_porcellus.DS562891.1                             I 9 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                       102671 9 +    143979 GGAGCAAG-C
i Cavia_tschudii.CavTsc_scaffold_8919                    I 9 C 0
s Cephalopachus_bancanus.k141_1423433                         6470 9 +     31688 CGGGGATG-G
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4479275 9 +   4669795 GCAGCAAG-A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3769 9 +     17872 GCAGCAAG-A
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4364 9 -     14043 GCAGCAAG-A
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12459 9 +     27781 GCAGCAAG-A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12613 9 -     20310 GGAGCAAG-A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15589 9 +     29689 GGAGCAAG-A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10349 9 -     20078 GGAGCAAG-A
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          18264 9 -     27936 GGAGCAAG-A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            7135 9 -     17152 GGAGCAAG-A
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826859 9 +  39242232 GGAGCAAG-A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226367 9 -  21565898 GGAGCAAG-A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43486 9 -     53127 GGAGCAAG-A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3736 9 +     13442 GGAGCAAG-A
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       18282 9 -     27947 GGAGCAAG-A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1311 9 +     10558 GGAGCAAG-A
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4316 9 +     14005 GGAGCAAG-A
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1548 9 -     17098 AGAGCAAG-A
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1424 9 +     17877 AGAGCAAG-A
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            158991 9 -    216457 AGAGCAAG-A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63466 9 +     76511 AGAGCAAG-A
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254629 4 +   2543920 -----AAG-C
i Chinchilla_lanigera.JH722012.1                         I 8 C 0
s Chiropotes_israelita.k141_747660                          100073 9 +    146308 AGATCAAG-A
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          31880 9 -     50570 AGATCAAG-A
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18432186 9 -  18827391 GGAGCGAG-A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18683 9 -     50209 GGAGCAAG-A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425687 9 + 135778131 GGAGCAAG-A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1914188 9 +   2368649 GGAGCAAG-A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952436 9 + 200372422 GGAGCAAG-A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40709 9 +     84244 GGAGCAAG-A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           2075 4 +     23735 -----AAC-C
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      I 22 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 52190 5 +     63868 ----CAAA-A
i Cricetomys_gambianus.CriGam_scaffold_18520             I 6 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             30234 9 -     87169 AGGGCAAG-A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 28 I 12
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37904 9 +     51376 GGAGCAAG-C
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 9 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900             1605 9 -     75252 AAAGCAAG-C
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 9 C 0
s Delphinapterus_leucas.KZ290073.1                        16813526 9 +  35494412 AGGGCAAG-A
i Delphinapterus_leucas.KZ290073.1                       I 55 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    38114 9 +     67921 GGAACAAG-C
i Dinomys_branickii.DinBra_scaffold_21862                I 9 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 35245 9 -     42551 GGCGCAAG-T
i Dolichotis_patagonum.DolPat_scaffold_30833             I 9 C 0
s Eidolon_helvum.AWHC01278734.1                                291 9 +      2334 AGAGGAAG-A
i Eidolon_helvum.AWHC01278734.1                          I 30 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       313666 9 +    607251 AGGGCAAG-A
i Elaphurus_davidianus.JRFZ01104969.1                    I 35 C 0
s Ellobius_lutescens.LOEQ01008920.1                          22700 5 -    110024 ----CAAA-A
i Ellobius_lutescens.LOEQ01008920.1                      I 6 C 0
s Ellobius_talpinus.LOJH01081419.1                            2620 5 +      8657 ----CAAA-A
i Ellobius_talpinus.LOJH01081419.1                       I 6 C 0
s Eptesicus_fuscus.JH977646.1                              2148791 9 -  14770903 AGGTCaag-a
i Eptesicus_fuscus.JH977646.1                            I 28 C 0
s Erythrocebus_patas.Contig38                             21208859 9 -  21539334 GGAGCAAG-A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12955 9 +    133382 AGGGCAAG-A
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 38 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             26901 9 -     44125 AGGGCAAG-A
i Eubalaena_japonica.EubJap_flattened_line_31514         I 38 C 0
s Felis_catus.CM001381.2                                  20238796 9 + 206538554 AGGGCAAG-A
i Felis_catus.CM001381.2                                 I 28 I 13
s Felis_catus_fca126.CM031415.1                           20197671 9 + 205367284 AGGGCAAG-A
i Felis_catus_fca126.CM031415.1                          I 28 I 13
s Felis_nigripes.FelNig_flattened_line_20823                 11331 9 -     36744 AGGGCAAG-A
i Felis_nigripes.FelNig_flattened_line_20823             I 28 I 13
s Fukomys_damarensis.KN121974.1                             852242 9 +   3816255 GGATCAAG-C
i Fukomys_damarensis.KN121974.1                          I 25 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               4070 9 -      9135 GGAGCAAG-A
i Galeopterus_variegatus.GalVar_scaffold_108840          I 26 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     610901 9 -    660261 AGGGCAAG-A
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 29 C 0
s Glis_glis.GliGli_scaffold_19807                            33039 9 +     49224 GGAGCAAG-A
i Glis_glis.GliGli_scaffold_19807                        I 25 C 0
s Gorilla_beringei.k141_3596273                              19700 9 -     32273 GGAGCAAG-A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341836 9 + 186649187 GGAGCAAG-A
i Gorilla_gorilla.LT578341.1                             C 0 I 76
s Graphiurus_murinus.GraMur_scaffold_10447                   35056 9 +     78134 GGAGCAAG-A
i Graphiurus_murinus.GraMur_scaffold_10447               I 25 C 0
s Helogale_parvula.HelPar_flattened_line_2585               244041 9 +    327341 AGGGCAAG-A
i Helogale_parvula.HelPar_flattened_line_2585            I 28 I 12
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 20110 9 +     36099 AGGGCAAG-A
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 29 C 0
s Heterocephalus_glaber.JH602082.1                        20663882 9 +  22651954 GGAGCAAG-C
i Heterocephalus_glaber.JH602082.1                       I 25 C 0
s Hipposideros_armiger.JXIK01000431.1                       112130 9 +   1711038 AAGGCAAG-A
i Hipposideros_armiger.JXIK01000431.1                    I 28 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188                695 9 +      9903 AGAGCAAG-A
i Hipposideros_galeritus.HipGal_scaffold_101188          I 28 C 0
s Hoolock_leuconedys.ctg274                                    438495 9 +    630532 GGAGCAAG-A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46780 9 +     55795 AGAGCAAG-A
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 29 I 12
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23580 9 -    143317 GGATCAAG-C
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 9 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84814 9 +    135385 GGAGCAAG-C
i Hystrix_cristata.HysCri_scaffold_5660                  I 25 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7522713 4 -   7955117 -----AAG-A
i Ictidomys_tridecemlineatus.JH393364.1                  I 21 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                 735 9 -     31341 AGGGCAAG-A
i Inia_geoffrensis.IniGeo_flattened_line_34779           I 43 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                  478 9 -     18011 AGGGCAAG-A
i Kogia_breviceps.KogBre_flattened_line_81059            I 37 C 0
s Lagothrix_lagothricha.k141_1005387                         16126 9 -     38430 AGAGCAAG-A
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    18504 9 -     42476 AGGTCAAG-A
i Lasiurus_borealis.LasBor_scaffold_32767                I 97 C 0
s Lipotes_vexillifer.KE559953.1                             269787 9 -    662738 AGGGCAAG-A
i Lipotes_vexillifer.KE559953.1                          I 44 C 0
s Lophocebus_aterrimus.ctg367                              1440817 9 +   1826925 GGAGCAAG-A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17957230 9 -  59628241 AGGACAAG-A
i Lycaon_pictus.CM007581.1                               I 28 I 13
s Macaca_arctoides.k141_2326796                              10627 9 +     40492 GGAGCAAG-A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679881 9 +  60120075 GGAGCAAG-A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16398 9 -     26193 GGAGCAAG-A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            84174 9 -    114318 GGAGCAAG-A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9865 9 -     23192 GGAGCAAG-A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19329 9 -     29190 GGAGCAAG-A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27907 9 +     37952 GGAGCAAG-A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842984 9 + 187317192 GGAGCAAG-A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461562 9 -  25927173 GGAGCAAG-A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83763 9 +     89720 GGAGCAAG-A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10756 9 +     20474 GGAGCAAG-A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10553 9 -     14993 GGAGCAAG-A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333415 9 -    668171 GGAGCAAG-A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8865 9 -     24072 GGAGCAAG-A
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29496 9 -     45290 GGAGCAAG-A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92458 9 +     94391 AAAGAAAG-A
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 30 C 0
s Mandrillus_leucophaeus.scaffold280                      23941084 9 -  24302211 GGAGCAAG-A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355200 9 +    752769 GGAGCAAG-A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33105003 4 -  40650429 -----AAG-A
i Marmota_marmota.CZRN01000018.1                         I 21 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        14962 9 -    207569 AGGGCAAG-A
i Megaderma_lyra.MegLyr_scaffold_4542                    I 28 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 34953 5 +    140813 ----CAAA-A
i Meriones_unguiculatus.MerUng_scaffold_7390             I 6 C 0
s Mesocricetus_auratus.KB708134.1                         12184410 5 -  29670104 ----CAAA-A
i Mesocricetus_auratus.KB708134.1                        I 6 I 20
s Mesoplodon_bidens.MesBid_scaffold_108144                    5168 9 +     10310 AGGGCAAG-A
i Mesoplodon_bidens.MesBid_scaffold_108144               I 41 C 0
s Microtus_ochrogaster.CM001695.1                         11262674 5 -  27267610 ----CAAA-A
i Microtus_ochrogaster.CM001695.1                        I 6 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1852000 9 +   8254450 AGGGCAAC-A
i Miniopterus_natalensis.LDJU01000034.1                  I 25 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             35684 9 +     64694 AGGGCAAC-A
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 26 C 0
s Miopithecus_ogouensis.k141_534055                          12764 9 -     28506 GGAGCAAG-A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    28911 9 -    437263 AGGGCAAG-A
i Monodon_monoceros.MonMon_M_scaffold_103                I 57 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   2946 9 +     82753 AGGACAAG-A
i Moschus_moschiferus.MosMos_scaffold_13123              I 29 C 0
s Murina_feae.MurFea_scaffold_85699                           8754 9 +     14753 AGGGCAAG-A
i Murina_feae.MurFea_scaffold_85699                      I 28 C 0
s Mus_caroli.LT608237.1                                   84363343 5 - 120012414 ----CAAA-A
i Mus_caroli.LT608237.1                                  I 6 C 0
s Mus_musculus.chr8                                       87652843 5 - 129401213 ----CAAG-A
i Mus_musculus.chr8                                      I 6 C 0
s Mus_pahari.LT608297.1                                   31357555 5 -  89631738 ----CAAA-A
i Mus_pahari.LT608297.1                                  I 6 C 0
s Mus_spretus.CM004101.1                                  90755332 5 - 130317789 ----CAAG-A
i Mus_spretus.CM004101.1                                 I 6 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              6532 9 +     14296 GGAACAAG-A
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 25 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     73161 9 -     80779 GGAGTGAG-C
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 9 C 0
s Myotis_brandtii.KE162005.1                                282495 9 -  10118263 AGGAcaag-a
i Myotis_brandtii.KE162005.1                             I 28 C 0
s Myotis_davidii.KB100139.1                                1589811 9 -   6019432 AGggcaag-a
i Myotis_davidii.KB100139.1                              I 28 C 0
s Myotis_lucifugus.GL429869.1                              3905927 9 -   4330536 AGGGcaag-a
i Myotis_lucifugus.GL429869.1                            I 28 C 0
s Myotis_myotis.MyoMyo_scaffold_44643                          227 9 +     25416 AGGGCAAG-G
i Myotis_myotis.MyoMyo_scaffold_44643                    N 0 C 0
s Nannospalax_galili.KL204047.1                            2037146 5 -   3037898 ----CAAA-A
i Nannospalax_galili.KL204047.1                          I 26 C 0
s Nasalis_larvatus.k141_413338                               18814 9 +     21681 GGAGCAAG-A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5867872 9 +   7148211 AGGGCAAG-A
i Neophocaena_asiaeorientalis.KZ687982.1                 I 54 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9151166 9 -   9404916 AGGGCAAG-A
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 28 I 13
s Ochotona_princeps.JH802162.1                             1366000 8 +   3988456 GGAGCA-G-A
i Ochotona_princeps.JH802162.1                           I 7 C 0
s Odocoileus_virginianus.KZ100018.1                         146467 9 +    630418 AGGGCAAG-A
i Odocoileus_virginianus.KZ100018.1                      I 45 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          78803 9 -    150152 AGGGCAAG-A
i Okapia_johnstoni.LVCL01S0005463.1                      I 29 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   27341 5 +     28053 ----CAAA-A
i Ondatra_zibethicus.OndZib_scaffold_46174               I 6 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    82718 5 +    102263 ----TGAA-A
i Onychomys_torridus.OnyTor_scaffold_2986                I 6 C 0
s Orcinus_orca.KB316932.1                                  2783768 9 -  10937097 AGGGCAAG-A
i Orcinus_orca.KB316932.1                                I 49 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       464251 9 -    559221 AGGGCAAG-A
i Otocyon_megalotis.JAEUCK010005147.1                    I 28 I 13
s Ovis_aries.CM001607.2                                   17588077 9 +  44047080 AGGGCAAG-A
i Ovis_aries.CM001607.2                                  I 34 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      176067 9 -    191736 AGGGCAAG-A
i Ovis_canadensis.OviCan_scaffold_2572                   I 32 C 0
s Pan_paniscus.KQ411613.1                                    47801 9 +     80009 GGAGCAAG-A
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146663 9 + 189151597 GGAGCAAG-A
i Pan_troglodytes.CM009242.2                             C 0 I 73
s Panthera_onca.PanOnc_flattened_line_3271                  152870 9 +    230217 AGGGCAAG-A
i Panthera_onca.PanOnc_flattened_line_3271               I 28 I 13
s Panthera_pardus.KV860321.1                                266181 9 +  18783137 AGGGCAAG-A
i Panthera_pardus.KV860321.1                             I 28 I 13
s Panthera_tigris.KE722367.1                               4723007 9 -   8748460 AGGGCAAG-A
i Panthera_tigris.KE722367.1                             I 28 I 13
s Pantholops_hodgsonii.KE114653.1                          1266974 9 -   2937107 AGGGCAAG-A
i Pantholops_hodgsonii.KE114653.1                        I 30 C 0
s Papio_anubis.CM001495.2                                183446890 9 + 183742232 GGAGCAAG-A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10540 9 +     20448 GGAGCAAG-A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567348 9 +  20919399 GGAGCAAG-A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   9280 9 +     41871 GGAGCAAG-A
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12573 9 +     27711 GGAGCAAG-A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3572 9 -     11374 GGAGCAAG-A
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14313 9 -     78924 GGGGCAAG-A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 28 I 13
s Peromyscus_maniculatus.KI615324.1                       18197463 5 -  18517816 ----CGAA-A
i Peromyscus_maniculatus.KI615324.1                      I 6 C 0
s Petromus_typicus.PetTyp_scaffold_221660                      613 9 -      2102 GAGGCGAG-C
i Petromus_typicus.PetTyp_scaffold_221660                I 25 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              10834 9 +     63832 AGGGCAAG-A
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 55 C 0
s Piliocolobus_badius.k141_1142974                            1891 9 +     68526 GGAGCAAG-A
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        42037 9 +     89929 GGAGCAAG-A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43451 9 +     51399 GGAGCAAG-A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299688 9 -  14605196 GGAGCAAG-A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3560 9 +     22620 AGGTCAAG-A
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 28 C 0
s Pithecia_albicans.k141_1476471                              5337 9 +     26961 AGATCGAG-A
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1482 9 +     23417 AGATCGAG-A
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                5329 9 +     29694 AGATCGAG-A
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          30355 9 +     52772 AGATCGAG-A
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           5351 9 +     26198 AGATCGAG-A
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3941899 9 +   4542175 AGATCGAG-A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            5315 9 -     23490 AGATCGAG-A
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610            138 9 +      7680 AGGGCAAG-A
i Platanista_gangetica.PlaMin_flattened_line_173610      I 42 C 0
s Plecturocebus_bernhardi.k141_2549090                        9569 9 -     39866 AGAGCAAG-A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18735 9 +     34906 AGAGCAAG-A
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       22997 9 +     87950 AGAGCAAG-A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23826 9 +     88961 AGAGCAAG-A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9497 9 +     39403 AGAGCAAG-A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          23278 9 -     87928 AGAGCAAG-A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         30237 9 +     60166 AGAGCAAG-A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30434 9 +     67232 AGAGCAAG-A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          25907 9 +     90634 AGAGCAAG-A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          23279 9 -     89403 AGAGCAAG-A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189134809 9 + 189387572 GGAGCAAG-A
i Pongo_abelii.CM009266.2                                C 0 I 24609
s Pongo_pygmaeus.ctg66                                     9574418 9 +   9816681 GGAGCAAG-A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               76991 9 -     81375 GGAGCAAG-A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8808 9 +     19060 GGAGCAAG-A
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            12594 5 -     21651 ----CAAA-A
i Psammomys_obesus.NESX01036370.1                        I 6 C 0
s Pteropus_alecto.KB030862.1                              22978541 9 +  28871421 AGAAGAAG-A
i Pteropus_alecto.KB030862.1                             I 30 C 0
s Pteropus_vampyrus.KN525825.1                             1361546 9 +   4952924 AGAGGAAG-A
i Pteropus_vampyrus.KN525825.1                           I 30 C 0
s Puma_concolor.QAVW01001104.1                            20276066 9 -  38429054 AGGGCAAG-A
i Puma_concolor.QAVW01001104.1                           I 28 I 13
s Pygathrix_cinerea.k141_1153803                             18800 9 -     91421 GGAGCAAG-A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612923 9 +   7812017 GGAGCAAG-A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18830 9 -     72585 GGAGCAAG-A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  8302 9 +     55207 AGGGCAAG-A
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 49 C 0
s Rattus_norvegicus.chr16                                 53572843 5 +  90668790 ----CAAA-A
i Rattus_norvegicus.chr16                                I 6 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        368583 9 -   3329780 AGGGCAAG-A
i Rhinolophus_sinicus.LVEH01000134.1                     I 27 C 0
s Rhinopithecus_bieti.k119_217274                            10498 9 -     11128 GGAGCAAG-A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239866 9 - 195417433 GGAGCAAG-A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675513 9 +   7961872 GGAGCAAG-A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89612 9 -     96226 AGAGGAAG-A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 30 C 0
s Semnopithecus_entellus.k141_1672505                         3672 9 -     12572 GGAGGAAG-A
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30524 9 +     39453 GGAGCAAG-A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           11032 9 +     27826 GGAGCAAG-A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10573 9 -     19483 GGAGCAAG-A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3871 9 -     12762 GGAGGAAG-A
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3716 9 +     13763 GGAGCAAG-A
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     2474 5 -     30804 ----CAAA-A
i Sigmodon_hispidus.SigHis_scaffold_42075                I 6 C 0
s Spermophilus_dauricus.KZ294078.1                         1955870 4 -   3870691 -----AAG-A
i Spermophilus_dauricus.KZ294078.1                       I 21 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              20301 9 -    196729 AGGGCAAG-A
i Suricata_suricatta.SurSur_flattened_line_6629          I 28 I 12
s Sus_scrofa.CM000828.4                                    6813414 9 +  69701581 AGGGCAAG-A
i Sus_scrofa.CM000828.4                                  I 31 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                12940 9 +     41958 GGGGCAAG-G
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 27 C 0
s Tarsius_lariang.k141_2201908                               27467 9 +     70052 CGGGGACG-G
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                2264 9 -     16117 CGGGGACG-G
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186432196 9 + 186847797 GGAGCAAG-A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              107288 9 +    114563 GGAGCAAG-C
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 25 C 0
s Trachypithecus_auratus.k141_722599                         14610 9 -     20410 GGAGCAAG-A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3733 9 -     12674 GGAGCAAG-A
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14718 9 +     19930 GGAGCAAG-A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      11120 9 -     19997 GGAGCAAG-A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            51261 9 -     60166 GGAGCAAG-A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18724 9 -     27529 GGAGCAAG-A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                        356 9 +      9229 GGAGCAAG-A
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          12258 9 -     21137 GGAGCAAG-A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                     358 9 +      9131 GGAGCAAG-A
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                          322 9 -      3730 GGAGCAAG-A
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28590 9 +     32220 GGAGCAAG-A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942687 9 +   6242583 GGAGCAAG-A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11939 9 +     20839 GGAGCAAG-A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    2197 9 +     27266 AGGGCAAG-A
i Tragulus_javanicus.TraJav_scaffold_40725               I 29 C 0
s Tupaia_chinensis.KB320699.1                              2157839 9 +   4065304 GGAGTAAG-A
i Tupaia_chinensis.KB320699.1                            I 26 C 0
s Tupaia_tana.TupTan_flattened_line_306982                     262 9 -      4186 AGAGTGAG-A
i Tupaia_tana.TupTan_flattened_line_306982               I 26 C 0
s Tursiops_truncatus.MRVK01000835.1                       15740020 9 +  33153633 AGGGCAAG-A
i Tursiops_truncatus.MRVK01000835.1                      I 50 C 0
s Vicugna_pacos.KN270157.1                                 5373702 9 -   5488506 agggcaag-a
i Vicugna_pacos.KN270157.1                               I 28 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 12695 9 -     43706 AGGGCAAG-A
i Vulpes_lagopus.VulLag_flattened_line_30954             I 28 I 13
s Xerus_inauris.XerIna_scaffold_2302                          2858 9 +    224448 GGAGCAAG-A
i Xerus_inauris.XerIna_scaffold_2302                     I 24 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_761354             323 9 -      1267 AGGGCAAG-A
i Ziphius_cavirostris.ZipCav_flattened_line_761354       I 41 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202 0 +      8798 C
e Galago_senegalensis.k141_631886                             7400 0 +     11339 C
e Galago_moholi.ctg2040                                     429710 0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964 2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445 0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734 0 -     33856 C
e Perodicticus_potto.k141_1186926                              597 0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219 0 -      3244 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      16500 0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Uropsilus_gracilis.UroGra_scaffold_12083                   54925 394 -     77625 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tonatia_saurophila.TonSau_scaffold_294                     83098 2 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_85600                    4490 2 +     18632 I
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Sorex_araneus.JH798187.1                                13652641 429 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    154809 432 -    313613 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Pteronotus_parnellii.KE909381.1                            16825 2 -     21811 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                        67149665 1414 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Octodon_degus.JH651603.1                                  749216 44 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869 0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414 0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947 0 - 196305487 C
e Noctilio_leporinus.NocLep_scaffold_251                    759530 2 +    783361 I
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Mungos_mungo.MunMun_flattened_line_23663                   36398 7 +     37127 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 143344 2 -    366855 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Micronycteris_hirsuta.MicHir_scaffold_52381                17753 2 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Manis_pentadactyla.KN006162.1                              52445 9 -    317179 I
e Manis_javanica.JSZB01003497.1                              20301 9 +    737560 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     8427 743 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Jaculus_jaculus.JH725527.1                               8278673 121 -   9596543 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689 0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8632007 2 +  20541912 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            69437 2 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Crocidura_indochinensis.CroInd_scaffold_239572              3398 0 -      5012 I
e Cricetulus_griseus.LT883664.1                           11668671 0 + 224834208 C
e Condylura_cristata.JH655891.1                           17549953 974 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            6415 2 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Carollia_perspicillata.CarPer_scaffold_92756                7006 2 -     11696 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6662 2 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         538 0 +      5281 C
e Anoura_caudifer.AnoCau_scaffold_1412                      187255 2 +    412891 I
e Allactaga_bullata.AllBul_scaffold_9566                     75924 121 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T

a score=0.000000
s hg38.chrUn_KI270753v1                                      10464 76 +     62944 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATGG-GTGAA---T----A
s Acinonyx_jubatus.LLWD01001279.1                           829074 49 -   1699592 ------------------------------------------------AGCGT-GC-A-A---GCGAC----CTCTC-AATCA-TGA---GT-C-AGGG-AATAGGG-AAA---T-AGGA
i Acinonyx_jubatus.LLWD01001279.1                        I 13 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     72942 64 +     87051 CGTTAAG-----AG----------C--AGAAACGCT-CAGG------AAGTGG-GC-C-G---CAGCA----CTTCC-CAGA--GTA---AGCC-AAG-GGGCCT-G-------------
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   18325 76 -     52922 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         18262 76 -     28001 CATTAGGAA-GGAC---AGCAGAGA--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8757 76 -     18505 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CGCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9610 76 -     12518 CATTAGCAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CGCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             10066 74 +     51355 CATGAGGAG-AAAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-C-C---GTGAC----CTCTC-TACCA-CTA---GT-C-AGGG-AATGG-ATAAA---------
i Alouatta_belzebul.k141_3560514                         C 0 I 2
s Alouatta_caraya.k141_1701091                                3173 74 -     36483 CATGAGGAG-AAAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-C-C---GTGAC----CTCTC-TACCA-CTA---GT-C-AGGG-AATGG-ATAAA---------
i Alouatta_caraya.k141_1701091                           C 0 I 2
s Alouatta_discolor.k141_566626                              13626 74 +     28687 CATGAGGAG-AAAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-C-C---GTGAC----CTCTC-TACCA-CTA---GT-C-AGGG-AATGG-ATAAA---------
i Alouatta_discolor.k141_566626                          C 0 I 2
s Alouatta_juara.k141_1302312                                 2098 74 +     27940 CATGAGGAG-AAAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-C-C---GTGAC----CTCTC-TACCA-CTA---GT-C-AGGG-AATGG-ATAAA---------
i Alouatta_juara.k141_1302312                            C 0 I 2
s Alouatta_macconnelli.k141_918386                            3177 74 -      9457 CATGAGGAG-AAAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-C-C---GTGAC----CTCTC-TACCA-CTA---GT-C-AGGG-AATGG-ATAAA---------
i Alouatta_macconnelli.k141_918386                       C 0 I 2
s Alouatta_nigerrima.k141_1929159                             2135 74 +     30492 CATGAGGAG-AAAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-C-C---GTGAC----CTCTC-TACCA-CTA---GT-C-AGGG-AATGG-ATAAA---------
i Alouatta_nigerrima.k141_1929159                        C 0 I 2
s Alouatta_palliata.k141_2135620                              6130 74 +     47717 CATGAGGAG-AAAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-C-C---GTGAC----CTCTC-TACCA-CTA---GT-C-AGGG-AATGG-ATAAA---------
i Alouatta_palliata.k141_2135620                         C 0 I 2
s Alouatta_puruensis.k141_362188                              2866 74 +      5663 CATGAGGAG-AAAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-C-C---GTGAC----CTCTC-TACCA-CTA---GT-C-AGGG-AATGG-ATAAA---------
i Alouatta_puruensis.k141_362188                         C 0 I 2
s Alouatta_seniculus.k141_117119                             17317 74 +     50774 CATGAGGAG-AAAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-C-C---GTGAC----CTCTC-TACCA-CTA---GT-C-AGGG-AATGG-ATAAA---------
i Alouatta_seniculus.k141_117119                         C 0 I 2
s Ammotragus_lervia.NIVO01071767.1                          677802 73 -   2318259 TGttagaaa-agaa---agcagatg--t--G------GAAG------TAGCAG-GC-A-A---CTGAC----CTCGC-CACTA-CTA---AT-C-AGGG-TATGG-A-AAA---T----A
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_12469            100257 73 -    100397 AGTTAGaaa-agaa---agcagatg--t--g------gaag------tagcct-gt-a-a---atgac----ctctc-cacta-cta---at-c-aggg-tatgg-a-aac---t----a
i Antilocapra_americana.AntAmePen_scaffold_12469         C 0 N 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      14396 75 +     20879 CATCAAGAA-AGAG---AGCAAGGA--AGCT------GGGG------TAGCAT-GC-A-A---GTGAG----CTCTC-TAGC--CTA---GT-C-AAG-AGATTG-GTAAA---C----A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 3
s Ateles_geoffroyi_b.tarseq_1536                             21210331 73 -  21539123 CATGAGGAG-AAAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-C-C---GTGAC----CTCTC-TACCG-CTA---GT-C-AGG--AATGG-ATAAA---------
i Ateles_geoffroyi_b.tarseq_1536                            C 0 I 2
s Ateles_belzebuth.k141_445860                               45127 73 -     48001 CATGAGGAG-AAAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-C-C---GTGAC----CTCTC-TACCG-CTA---GT-C-AGG--AATGG-ATAAA---------
i Ateles_belzebuth.k141_445860                           C 0 I 2
s Ateles_chamek.k141_1806455                                 27931 73 -     30947 CATGAGGAG-AAAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-C-C---GTGAC----CTCTC-TACCG-CTA---GT-C-AGG--AATGG-ATAAA---------
i Ateles_chamek.k141_1806455                             C 0 I 2
s Ateles_geoffroyi_a.k141_833924                                9703 73 -     89868 CATGAGGAG-AAAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-C-C---GTGAC----CTCTC-TACCG-CTA---GT-C-AGG--AATGG-ATAAA---------
i Ateles_geoffroyi_a.k141_833924                           C 0 I 2
s Ateles_marginatus.k141_803263                              14087 73 -     40414 CATGAGGAG-AAAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-C-C---GTGAC----CTCTC-TACCG-CTA---GT-C-AGG--AATGG-ATAAA---------
i Ateles_marginatus.k141_803263                          C 0 I 2
s Ateles_paniscus.k141_457735                                21976 73 +     72325 CATGAGGAG-AAAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-C-C---GTGAC----CTCTC-TACCG-CTA---GT-C-AGG--AATGG-ATAAA---------
i Ateles_paniscus.k141_457735                            C 0 I 2
s Balaenoptera_acutorostrata.KI537508.1                   15193651 76 +  23207421 TGttagaaa-agaa---agcagatg--t--g------GAAG------TAGGAT-GC-A-A---GTGAC----CTCTC-TATCA-CTA---AT-C-AAGG-AATGG-A-AAA---T-ACGA
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         4116 76 -     18090 TGttagaaa-agaa---agcagatg--t--g------GAAG------TAGGAT-GC-A-A---GTGAC----CTCTC-TATCA-CTA---AT-C-AAGG-AATGG-A-AAA---T-ACGA
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    28885 73 +     34529 TGTTAGAAA-AGAA---AGCAGATG--T--G------GAAG------TAGCAG-GC-C-A---CTGAC----CTCTC-CACTA-CTA---AT-C-AGGG-TATGG-A-AAA---T----A
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    202892 73 -    288883 TGTTAGAAA-AGAA---AGCAGATG--T--G------GAAG------TAGCAT-GC-A-A---ATGAC----CTCCC-CACTA-CTA---AT-C-AGGG-TATGG-A-AAA---T----A
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20276132 73 +  48749331 TGttagaaa-agaa---agcagatg--t--N------GAAG------TAGAAT-GC-A-A---ATGAC----CTCCC-CACTA-CTA---AT-C-AGGG-TATGG-A-AAA---T----A
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1128685 73 -   1948126 TGttagaaa-agaa---agcagatg--t--G------GAAG------TAGCAT-GC-A-A---ATGAC----CTCCC-CACTA-CTA---AT-C-AGGG-TATGG-A-AAA---T----A
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18086770 73 +  45695690 TGttagaaa-agaa---agcagatg--T--G------GAAG------TAGAAT-GC-A-A---ATGAC----CTCCC-CACTA-CTA---AT-C-AGGG-tatgg-a-aaa---t----a
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2822730 73 +   4408762 TGttagaaa-agaa---agcagatg--T--G------GAAG------TAGCAT-GC-A-A---ATGAC----CTCCC-CACTA-CTA---AT-C-AGGG-TATGT-A-AAA---T----A
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                102953 74 -    122966 CATCAGGAA-AAAC---AGCAGAGA--TGCT------GACG------TCACAT-AC-A-C---GTGAC----CTCTC-TGCCG-CTA---GT-C-AGGG-AATGG-ATGAA---------
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   62456 74 +     81800 CATCAGGAA-AAAC---AGCAGAGG--TGCT------GACG------TCACAT-AC-A-C---GTGAC----CTCTC-TGCCG-CTA---GT-C-AGGG-AATGG-ATGAA---------
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31638 74 -     95584 CATCAGGAA-AAAC---AGCAGAGA--TGCT------GACG------TCACAT-AC-A-C---GTGAC----CTCTC-TGCCG-CTA---GT-C-AGGG-AATGG-ATGAA---------
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55739 74 -    119600 CATCAGGAA-AAAC---AGCAGAGG--TGCT------GACG------TCACAT-AC-A-C---GTGAC----CTCTC-TGCCG-CTA---GT-C-AGGG-AATGG-ATGAA---------
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10004190 76 -  17673402 cattagaaa-agaa---agtagaag--t--g------AAAG------TTGCAT-GC-A-A---GTGAC----CTCTC-TACCA-CAA---GT-C-AGGG-AATGG-G-AAA---T-GGGA
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2336662 76 -   7040546 cgttagaaa-agaa---agtagaag--t--g------AAAG------TTGCAT-GC-A-A---GTGAC----CTCTC-TACCA-CAA---GT-C-AGGG-AATGG-G-AAA---T-GGGA
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  404960 76 -   1652518 cattagaaa-agaa---agtagaag--t--g------AAAG------TTGCAT-GC-A-A---GTGAC----CTCTC-TACCA-CAA---GT-C-AGGG-AATGG-G-AAA---T-GGGA
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17801098 47 -  60362399 ------------------------------------------------AGCAT-G--C-A---GGGAT----GTCTC-TACTA-TTA---GT-C-AG-G-AATAGAG-AAA---T-AGGA
i CanFam4.chr16                                          I 13 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     1841 47 -     43241 ------------------------------------------------AGCAT-G--C-A---GAGAT----GTCTC-TACTA-TTA---GT-C-AG-G-AATAGAG-AAA---T-AGGA
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 13 I 1
s Canis_lupus_dingo.QKWQ01000480.1                         9036541 47 -   9314153 ------------------------------------------------AGCAT-G--C-A---GGGAT----GTCTC-TACTA-TTA---GT-C-AG-G-AATAGAG-AAA---T-AGGA
i Canis_lupus_dingo.QKWQ01000480.1                       I 13 I 1
s Canis_lupus_familiaris.chr16                            17961012 47 -  59632846 ------------------------------------------------AGCAT-G--C-A---GAGAT----GTCTC-TACTA-TTA---GT-C-AG-G-AATAGAG-AAA---T-AGGA
i Canis_lupus_familiaris.chr16                           I 13 I 1
s Canis_lupus_orion.HG994398.1                            18502314 47 +  63665305 ------------------------------------------------AGCAT-G--C-A---GAGAT----GTCTC-TACTA-TTA---GT-C-AG-G-AATAGAG-AAA---T-AGGA
i Canis_lupus_orion.HG994398.1                           I 13 I 1
s Capra_aegagrus.CM003241.1                               18831907 73 +  46296322 TGttagaaa-agaa---agcagatg--t--G------GAAG------TAGCAG-GC-A-A---CTGAC----CTCGC-CACTA-CTA---AT-C-AGGG-TATGG-A-AAA---T----A
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18062627 73 -  44709034 TGttagaaa-agaa---agcagatg--T--G------GAAG------TAGCAG-GC-A-A---CTGAC----CTCGC-CACTA-CTA---AT-C-AGGG-TATGG-A-AAA---T----A
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    2980 72 -     12242 TACTGGGAA-AG-----AGCAGAGG--AGCT------GAAG------TTGAAT-GC-A-A---GTG----GCCTCTC-TGTC--CTA---GT-G-GAG--AATGA-GTGAA---T----A
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           156980 74 -    496798 -ATCCGGAA-GAA-----GCAGAGT--TGCT------GACA------CCATGT-GC-A-A---GTG-A----CTCTC-CACTG-CT----CT-T-AGAG-GATGA-GGAAA---C-AGGA
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    138946 75 +    179628 CATCAGAAA-ATAA---AACAAAGA--ATCT------GAGA------TAATGT-GC-C-G---GTGAC----TTCTG-TACC-ACAA---GT-C-AAG--GAATA-GTAAA---T----A
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     95836 73 +    217609 AGTTAGGAA-AGAC---AGCAGACA--T--G------CAAG------TAGCAT-GC-A-A---GTGAC----CTCTC-TACTA-CTA---AT-C-AGAG-AATGG-G-AAA---T----A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18351538 70 -  23392119 CACTGAGAA-AG-----AGCAGAGA--AGCT------GAAA------CAGTAT-TC-A-G---GTG--A----TCTC-TGTT--TTA---GT-A-GAT--AAAGA-GTAAA---C----A
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18363798 70 -  23407841 CACTGAGAA-AG-----AGCAGAGA--AGCT------GAAA------CAGTTT-TC-A-G---GTG--A----TCTC-TGTT--TTA---GT-A-GAT--AAAGA-GTGAA---C----A
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                       102680 70 +    143979 CACTGAGAA-AG-----AGCAGAGA--AGCT------GAAA------CAGTTT-TC-A-G---GTG--A----TCTC-TGTT--TTA---GT-A-GAT--AAAGA-GTGAA---C----A
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         6479 74 +     31688 -ATCCGGAA-GAA-----GCAGAGT--TACT------GACA------CCATGT-GC-A-A---GTG-A----CTCTC-CACTG-CT----CT-C-AGAG-GACGG-GGAAA---C-AGGA
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4479284 76 +   4669795 CATGAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAC-AC-A-G---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3778 76 +     17872 CATGAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAC-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4373 76 -     14043 CATGAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAC-AC-A-G---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12468 76 +     27781 CATGAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAC-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-GATAG-GTAAA---T----A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12622 76 -     20310 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAT----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15598 76 +     29689 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10358 76 -     20078 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          18273 76 -     27936 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            7144 76 -     17152 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826868 76 +  39242232 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226376 76 -  21565898 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43495 76 -     53127 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3745 76 +     13442 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       18291 76 -     27947 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1320 76 +     10558 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4325 76 +     14005 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1557 74 -     17098 CATCAGGAA-GAAC---AGCAGAGG--TGCT------GGCG------TCACAC-AC-A-C---GTGAC----CTCTC-TGCCA-CTA---GT-C-AGGG-AATGG-ATAAA---------
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1433 74 +     17877 CATCAGGAA-GAAC---AGCAGAGG--TGCT------GGCG------TCACAC-AC-A-C---GTGAC----CTCTC-TGCCA-CTA---GT-C-AGGG-AATGG-ATAAA---------
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            159000 74 -    216457 CATCAGGAA-GAAC---AGCAGAGG--TGCT------GGCG------TCACAC-AC-A-C---GTGAC----CTCTC-TGCCA-CTA---GT-C-AGGG-AATGG-ATAAA---------
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63475 74 +     76511 CATCAGGAA-GAAC---AGCAGAGG--TGCT------GGCG------TCACAC-AC-A-C---GTGAC----CTCTC-TGCCA-CTA---GT-C-AGGG-AATGG-ATAAA---------
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254633 71 +   2543920 CACTGGGCA-AG-----AGCAGAGA--GGCT------GAAA------TGGTGT-GC-A-G----GA--A--CCTCTC-TACC--CCA---GA-A-GAG--AAGGG-GTGAA---T----A
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_israelita.k141_747660                          100082 74 +    146308 CATCAGGAA-AAAC---AGCAGAGG--TGCT------GACG------TCACAT-AC-A-C---GTGAC----CTCTC-TGCCA-CTA---GT-C-AGGG-AATGG-ATGAA---------
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          31889 74 -     50570 CATCAGGAA-AAAC---AGCAGAGG--TGCT------GACG------TCACAT-AC-A-C---GTGAC----CTCTC-TGCCA-CTA---GT-C-AGGG-AATGG-ATGAA---------
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18432195 76 -  18827391 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18692 76 -     50209 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAC-CC-A-A---GTGAC----CTCTC-TGCCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425696 76 + 135778131 CATTAGGAA-GGAC---AGCAGAGG--CGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1914197 76 +   2368649 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAC-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GC-C-AGGG-AATAG-GTAAA---T----A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952445 76 + 200372422 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAC-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GC-C-AGGG-AATAG-GTAAA---T----A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40718 76 +     84244 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAC-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GC-C-AGGG-AATAG-GTAAA---T----A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           2079 76 +     23735 CTTTAGCAA-AGAA---AGCAGACT-CT--G------GAAG-T-----AGCCT-GC-A-G---GTGAC----CTCTC-TACCA-GTC---AT-C-TG-G-AATGG-G-AACTATG----A
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 52195 69 +     63868 TGCTAAGAA-AAAG----------A--AGAGGATCT-GAGG------GAGTAT-GC-C-A---CAGCC----CTCCCCCTCC--ACA---AGCC-AAG-GGATAG-G-------------
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             30255 49 -     87169 ------------------------------------------------TGCAT-GC-A-A---GCGAC----CTCTC-AATCC-TGA---CT-C-AGGG-AATGGGG-AGA---C-TGGA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 12 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37913 72 +     51376 TACTGAGAA-AG-----AGCAGAGT--AGCT------GAAA------CTGAAC-AC-A-A---GTG--A--CCTCTC-CGTC--CTA---GC-A-GAG--AATGG-GTGAA---T----A
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900             1614 72 -     75252 CACTGGGAA-AA-----AGTAGAGA--AGCT------GAAA------TAATAT-TC-A-A---GTG--A--CCTCTC-TGTC--CTA---GT-A-GAG--AAGGG-ATAAA---C----A
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16813535 76 +  35494412 TGttagaaa-agaa---agcagatg--t--g------GAAG------TAGTAT-TC-A-A---GTGAC----GTCTC-TATCA-CTA---AT-C-AAGG-AATGG-A-AAA---T-ACGA
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    38123 71 +     67921 CCCTGGAGA-AG-----AGCAGAGA--AGCT------GAAA------TGGTGT-GC-A-G----GG--A--CCTCTC-TGTC--CCA---GT-A-GAG--AGTGG-GTGAA---C----A
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 35254 70 -     42551 CACTGGGAA-AG-----AGCAGAGA--AGCT------GAAA------TAATAT-TC-A-A---GTG--A----TCTC-TGTT--TTA---GT-A-GAT--AGTGA-GTGAA---C----A
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.AWHC01278734.1                                300 76 +      2334 CCTTAGGAA-AGAA---AGCAGACT-T---G------AAAG-----C-AGCAT-GC-A-G---GTGAC----CTCTT-CACCA-TTA---AT-C-AGAG-AATAA-G-AACTACT----A
i Eidolon_helvum.AWHC01278734.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       313675 72 +    607251 TGttagaaa-agaa---agcagatg--t--G------GAAG------TGGCAT-GT-G-A---ATGAC----CTCTC-CACTA-CTA---AT-C-AGGG-TATG--A-AAA---T----A
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          22705 68 -    110024 TGCTAAGAACAGAG----------C--ACAGCCCCT-GAGG------GAATGT-GC-C-A---CAGCC----CTCCC-CATC--ACA---AT-C-AAG-GGGTGG-A-------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 7
s Ellobius_talpinus.LOJH01081419.1                            2625 68 +      8657 TGCTAAGAACAGAG----------C--ACAGCCCCT-GAGG------GAATGT-GC-T-A---CAGCC----CTCCC-CATC--GCA---AT-C-AAG-GGGTGG-A-------------
i Ellobius_talpinus.LOJH01081419.1                       C 0 I 7
s Eptesicus_fuscus.JH977646.1                              2148800 72 -  14770903 cagaaggaa-ggg----aggggagc--t--a------GAAG-T-----AGCAC-AC-A-A---GTGAC----CTCCC-TACCA-CTA---AC-C-AGGG-AGTGG-G-AGA---T----A
i Eptesicus_fuscus.JH977646.1                            C 0 I 3
s Erythrocebus_patas.Contig38                             21208868 76 -  21539334 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCCC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           12964 76 +    133382 TGTTAGAAA-AGAA---AGCAGATG--T--G------GAAG------TATGAT-GC-A-A---GTGAC----CTCTC-TATCA-CTA---AT-C-AAGG-AGTGG-A-AAA---T-ACGA
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             26910 76 -     44125 TGTTAGAAA-AGAA---AGCAGATG--T--G------GAAG------TAGGAT-GC-A-A---GTGAC----CTCTC-TATCA-CTA---GT-C-AAGG-AATGG-A-AAA---T-ACGA
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20238818 49 + 206538554 ------------------------------------------------AGCGT-GC-A-A---GCGAC----CTCTC-AATCA-TGA---GT-C-AGGG-AATAGGG-AAA---T-AGGA
i Felis_catus.CM001381.2                                 I 13 C 0
s Felis_catus_fca126.CM031415.1                           20197693 49 + 205367284 ------------------------------------------------AGCGT-GC-A-A---GCGAC----CTCTC-AATCA-TGA---GT-C-AGGG-AATAGGG-AAA---T-AGGA
i Felis_catus_fca126.CM031415.1                          I 13 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 11353 49 -     36744 ------------------------------------------------AGCGT-GC-A-A---GCGAC----CTCTC-AATCA-TGA---GT-C-AGGG-AACAGGG-AAA---T-AGGA
i Felis_nigripes.FelNig_flattened_line_20823             I 13 C 0
s Fukomys_damarensis.KN121974.1                             852251 73 +   3816255 CATTGGGAA--A--GA--ACAGAGA--AGCT------GAAA------TAGTAT-AC-AAA---GCG--A--CCTCTC-TATT--CTA---AT-A-GAG--AATGG-GTGAA---T----A
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               4079 76 -      9135 CTTTAGGAA-AGAC---AACAGAGA--CACT------GAAG------TAGCTT-GC-A-A---GTGAC----TTCTT-TACCA-CTA---GT-G-AGGG-AATGA-GTAAA---T----A
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     610910 73 -    660261 AGttagaaa-agaa---agcagatg--t--G------GAAG------TAGCAT-GT-A-A---ATGAC----CTCTC-CACAA-CTA---AT-C-AGGG-tatgg-a-aaa---t----a
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            33048 75 +     49224 CATCAGGAA-AGAG---AGAAGAGA--CCCT------GAAG------TAGTGT-GC-A-A---GTGAC----CTCCG-TACC--CTC---GT-C-AAG-GTACAG-GCAAA---C----A
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              19709 76 -     32273 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATGG-GTGAA---T----A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.CYUI03001204.1                             17302 76 -     63219 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATGG-GTGAA---T----A
i Gorilla_gorilla.CYUI03001204.1                         I 2639 I 487
s Graphiurus_murinus.GraMur_scaffold_10447                   35065 74 +     78134 CATCAAGAA-AGAG---AGGAGAGA--AGCT------GAAG------TAGTAT-A--A-A---GTGAC----CTCTA-TACC--CTA---GG-C-AAG-GAATGG-GCAAA---C----A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               244062 49 +    327341 ------------------------------------------------AGCAT-GC-A-A---GCGAC----CTCTC-AATCC-TGA---GT-C-AGGA-AACAGGG-AGA---AGAG-A
i Helogale_parvula.HelPar_flattened_line_2585            I 12 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 20119 73 +     36099 TGTTAGAAA-AGAA---AGCAGATG--T--G------GAAG------TAGCAG-GC-A-A---CTGAC----CTCTC-CACTA-CTA---AT-C-AGGG-TATGG-A-AAA---T----A
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20663891 74 +  22651954 CATTGGGAA-AG---AGAGCAGAGA--AGAT------GAAA------TAGTGT-AC-A-A---GTG--A-G-CTCTC-TAAC--CCA---GG-A-GAG--AATGG-GCAAA---T----A
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       112139 76 +   1711038 CATTAGGAA-TGAA---AGCAGGCT-CT--G------GAAG-----C-AGCAT-GT-A-G---GTGGC----CTCTC-TCCCA-CTG---AT-C-AG-G-AATAG-A-AAGCACG----A
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188                704 76 +      9903 CATTAGGAA-TGAA---AGCAGGCT-CT--G------GAAG-----C-AGCGT-GT-A-G---TTGGC----CTCTC-TCCCA-CTG---AT-C-AG-G-AATGG-G-AAGCCCG----A
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 C 0
s Hoolock_leuconedys.ctg274                                    438504 76 +    630532 CATTAGGAA-GGAC---TGCAGAGG--TACT------GACA------TCACAT-CC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AACGG-GTAAA---T----A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46801 49 +     55795 ------------------------------------------------AGCAT-GC-A-G---GCAAC----ATTTC-AATCA-TGA---GT-C-AGGG-AATGGGG-AGA---TGAG-A
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 12 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23589 70 -    143317 CACTGGTAA-AG-----AGAAGAGA--AGCT------GAAA------CAGTAT-TC-A-A---GTG--A----TCTC-TGTT--TTA---GT-A-GAT--AATGA-GTGAA---C----A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84823 73 +    135385 CCTGGGGAA-AGGG---AGCAGTGA--AGCC------AAAG-------GGTGT-GC-A-A---GTGAC----CCCTC-TACT--CAA---GT-A-GAG--AGTGG-ATGAA---A----A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 4
s Ictidomys_tridecemlineatus.JH393364.1                    7522717 75 -   7955117 GCTCAGGAA-AGAG---AGTACAGA--AGCT------GGTA------TGGTGT-GC-A-A---GCGAC----CTCAC-TAGC--CCA---GT-C-AAG-GGACGG-GCAAA---C----A
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 6
s Inia_geoffrensis.IniGeo_flattened_line_34779                 744 54 -     31341 TGTTAGAAA-AGAA---AGCAGATG--T--G------GAAG------TAGGAT-TC-A-A---GTGAC----GTCTC-TATCA-CT----------------------------------
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 I 19
s Kogia_breviceps.KogBre_flattened_line_81059                  487 75 -     18011 TGTTAGAA--AGAA---AGCAGATG--T--G------GAAG------AAGGAT-GC-A-A---GTGAC----CTCTC-TATCG-CTA---AT-C-AACG-AATGG-A-AAA---T-ATGA
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         16135 73 -     38430 CATGAGGAG-AAAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-C-C---GTGAC----CTCTC-TACCG-CTA---GG-C-AGG--AATGG-ATAAA---------
i Lagothrix_lagothricha.k141_1005387                     C 0 I 2
s Lasiurus_borealis.LasBor_scaffold_32767                    18513 41 -     42476 CAGAAGGAA-GGGG---AGGGGAGC--T--G------GCCG-----C-AGCCT-GC-A-G---GTGA-----------------------------------------------------
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 29
s Lipotes_vexillifer.KE559953.1                             269796 76 -    662738 TGttagaaa-agaa---agcagatg--t--g------AAAG------TAGGAG-TC-A-A---GTGAC----ATCTC-TATCA-CTT---AT-C-AAGG-AATGG-A-AAA---T-ACGA
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1440826 76 +   1826925 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAC-AC-A-A---GTGAC----CTCTC-CATCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17957252 47 -  59628241 ------------------------------------------------AGCAT-G--C-A---GGGAT----GTCTC-TACTA-TTA---GT-C-AG-G-AATAGAG-AAA---T-AGGA
i Lycaon_pictus.CM007581.1                               I 13 I 1
s Macaca_arctoides.k141_2326796                              10636 76 +     40492 TATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAC-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679890 76 +  60120075 TATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAC-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16407 76 -     26193 TATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAC-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            84183 76 -    114318 TATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAC-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9874 76 -     23192 TATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAC-AC-A-A---GTGAC----CTCTG-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19338 76 -     29190 TATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAC-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27916 76 +     37952 TATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAC-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186842993 76 + 187317192 TATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAC-AC-A-A---GTGAC----CTCTG-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461571 76 -  25927173 TATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAC-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83772 76 +     89720 TATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAC-AC-A-A---GTGAC----TTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10765 76 +     20474 TATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAC-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10562 76 -     14993 TATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAC-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333424 76 -    668171 TATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAC-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8874 76 -     24072 TATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAC-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29505 76 -     45290 TATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAC-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92467 76 +     94391 CCTTAGGAA-AGAA---AGCAGACT-C---G------AAAG-----C-AGCAT-GC-A-G---GTGAC----TTCTT-CACCA-TTA---AT-C-AGAG-AATAA-G-AACTACT----A
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23941093 76 -  24302211 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAC-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355209 76 +    752769 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAC-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33105007 75 -  40650429 GCTCAGGAA-AGAG---AGTACAGA--AGCT------GGTA------CGGTGT-GC-A-A---GCGAC----CTCTC-TAGC--CCT---GT-C-AAG-GGATGG-GCAAA---C----A
i Marmota_marmota.CZRN01000018.1                         C 0 I 6
s Megaderma_lyra.MegLyr_scaffold_4542                        14971 77 -    207569 CCTTAGGAA-AGAA---AGCAGGCC-CT--G------GAAG-----C-AACAT-GC-A-G---GTCAT----CTCTC-TGCCA-CTA---AT-C-AGGG-AATGG-A-AACTACG----A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 34958 64 +    140813 TGTTAAG-----AG----------C--AGAAACTCT-CAGG------GAATGG-GC-C-A---CAATC----CTTCC-CACC--ACA---ATCC-AAA-GGGTAG-G-------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12184435 43 -  29670104 -------------------------------------GAGG------GAAT-T-GC-C-A---CAACC----CTC-C-CTTC--ACA---AA-CCAAG-AGGTGA-A-------------
i Mesocricetus_auratus.KB708134.1                        I 20 I 10
s Mesoplodon_bidens.MesBid_scaffold_108144                    5177 76 +     10310 TGTTAGAAA-AGAA---AGCAGATG--T--G------GAAG------TAGGAT-GC-A-A---GTGAC----CTCTC-TGTCA-CTA---AT-C-AAGG-AATGG-A-AAA---T-ATGA
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11262679 67 -  27267610 TGCTGAGAACAGAG----------C--ACAGCCCCT-GAGG------GAATGT-GT-C-A---CAGCC----CTTCC-CATC--GCA---AT-C-AAG--GGTGG-A-------------
i Microtus_ochrogaster.CM001695.1                        C 0 I 7
s Miniopterus_natalensis.LDJU01000034.1                    1852009 67 +   8254450 CAGACGGAA-GAAA---AGCAGAGT--T--G------GAAGG------AGCA--GC-A-G---GT--------TCCC-TACCA-C-A---AT-C-AGGG-AACGG-A-AAA---T----G
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 3
s Miniopterus_schreibersii.MinSch_scaffold_18080             35693 67 +     64694 CAGACGGAA-GAAA---AGCAGAGT--T--G------GAAGG------AGCA--GC-A-G---GT--------TCCC-TACCA-C-A---AT-C-AGGG-AACGG-A-AAA---T----G
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 3
s Miopithecus_ogouensis.k141_534055                          12773 76 -     28506 CATTAGGAA-GGAC---AGCAGAGG--CGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    28920 76 -    437263 TGTTAGAAA-AGAA---AGCAGATG--T--G------GAAG------TAGGAT-TC-A-A---GTGAC----GTCTC-TATCA-CTA---AT-C-AAGG-AATGG-A-AAA---T-ACGA
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   2955 73 +     82753 TGTTAGAAA-AGAA---AGCAGATG--T--G------GAAG------TAGCAT-GC-A-A---ATGGC----CTCTC-CACTA-CCA---AT-C-AGGG-TGTGG-A-AAA---T----A
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           8763 72 +     14753 CAGAAAGAA-GGGA---AGGGGAGC--T--G------GAAGG------AGCAT-GC-A-G---GTGAC----CTCCC-TACCA-CTA---AC-C-AGGA-AG-GG-G-AAA---T----A
i Murina_feae.MurFea_scaffold_85699                      C 0 I 3
s Mus_caroli.LT608237.1                                   84363348 64 - 120012414 CCCTAGG-----AG----------C--AGAAAC-CTTTAGT------GAGCGT-GC-C-A---TAGCC----CTCCC-CACG--ACA---AGCC-ACA-GGGTAG-G-------------
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87652848 64 - 129401213 CCCTAGG-----AG----------C--AGAAACCCT-TAGC------GAGCAT-GC-C-A---TAGCC----CTCCG-CACG--ACA---AGCC-GCG-GGGTAG-G-------------
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31357560 64 -  89631738 CCCTAAG-----AG----------C--AGGAACCCT-GAGC------AAGTGT-GC-C-A---CAGCC----CTCCC-CATG--ACA---AGCC-AAG-Gggcag-g-------------
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90755337 64 - 130317789 CCCTAGG-----AG----------C--AGAAACCCT-TAGC------GAGCGT-GC-C-A---TAGCC----CTCCC-CACG--ACA---AGCC-TCG-GGGTAG-G-------------
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              6541 75 +     14296 CATCAGACA-GAAG---AGCAGAGA--AGTT------GAAG------TAGTGT-GC-A-A---ATGAC----TTCTG-TATC--CTA---GT-T-AAT-GAATGG-GCAAA---C----A
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     73170 72 -     80779 TACTGGGAG-AG-----AGCAGAGG--AGCT------GAAG------TAGAAT-GC-A-A---GTG--A--CCTCTC-TGTC--CTA---GT-A-GAG--AATGG-GTGAA---T----A
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                282504 73 -  10118263 cagaaggaa-ggga---aggggagc--t--g------GAAGG------AGCAT-GC-A-G---GTGAC----CTCCC-TACCA-CTA---AC-C-AGGG-AGTGG-G-AAG---T----A
i Myotis_brandtii.KE162005.1                             C 0 I 3
s Myotis_davidii.KB100139.1                                1589820 73 -   6019432 aagaaggaa-ggga---aggggagc--t--g------GAAGG------AGCAT-GC-A-G---GTGAC----CTCCC-TACCA-CTA---AC-C-AGGG-AGTGG-G-AAG---T----A
i Myotis_davidii.KB100139.1                              C 0 I 3
s Myotis_lucifugus.GL429869.1                              3905936 73 -   4330536 cagaaggaa-ggga---aggggagc--t--g------GAAGG------AGCAT-GC-A-G---GTGAC----CTCCC-TACCA-CTA---AC-C-AGGG-AGTGG-G-AAG---T----A
i Myotis_lucifugus.GL429869.1                            C 0 I 3
s Myotis_myotis.MyoMyo_scaffold_44643                          236 71 +     25416 CAGAAGGAA-GGGA---AGGGGGGC--T--G------GAAGG------AGCAT-GC-C-G---GTGGC----CTCCC-TACCA-CTA---AC-C-AGGG-AGTGG-G-AAG---------
i Myotis_myotis.MyoMyo_scaffold_44643                    C 0 I 4
s Nannospalax_galili.KL204047.1                            2037151 62 -   3037898 TGCCAGGAA-AGAG----------C--AGAG------AAAG------CAGAGT-GT-C-A---AAGAC----CTCTC-TACC--ACC---AT-C-AAG-ATCTAT-A-------------
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               18823 76 +     21681 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5867881 78 +   7148211 TCttagaaa-agaa---agcagatgtgT--G------GAAG------TAGGAT-TC-A-A---GTGAC----GTCTC-TGTCA-CTA---AT-C-AAGG-AATGG-A-AAA---T-ACGA
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9151188 28 -   9404916 ------------------------------------------------AGCAT-G-CA-A---GGGAC----GTCTC-TACTA-TTA---G-----------------------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 13 I 20
s Ochotona_princeps.JH802162.1                             1366008 73 +   3988456 CTTTGGGAA-AGAC---AGCAGACA----CT------AGCT------TAGCAT-GC-A-A---ATGAC----CTCTC-TATC--TTA---CT-T-AAGG-GATAA-ATATA---T----A
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         146476 73 +    630418 TGTTACAAA-AGAA---AGCAGATG--T--G------GAAG------TGGCAT-GT-A-A---ATGAC----CTCTC-CACTA-CTA---AT-C-AGGG-TATGG-A-AAA---T----A
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          78812 73 -    150152 Agttagaaa-agaa---agcaaatg--t--g------gaAG------TAGCAT-GT-A-A---ATGAC----CTTTC-CACAA-CTA---AT-C-AGGG-TATGG-A-AAA---T----A
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   27346 68 +     28053 TGCTAAGAACAGAG----------C--ATAGCCCCT-GAGG------GAATGT-GC-C-A---CAACC----CTCAC-CATT--GCA---AT-C-AAG-AGGTAG-A-------------
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 7
s Onychomys_torridus.OnyTor_scaffold_2986                    82723 68 +    102263 TGCTAAGAA-AGAG----------C--AGAACCCCT-GAGG------AAATGT-GC-C-A---CGGCC----CTCGC-CATT--GCA---AGCC-ACG-GGGCAG-A-------------
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2783777 76 -  10937097 TGttagaaa-agaa---agcagatg--t--G------GAAG------TAGGAT-TC-A-A---GTGAC----GTCTC-TATCA-CTA---AT-C-AAGG-AATGG-A-AAA---T-ACGA
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       464273 47 -    559221 ------------------------------------------------AGCAT-G--C-A---GGGAT----GTCTC-TACTA-TTA---GT-C-AG-G-AATAGAG-AAA---T-AGGA
i Otocyon_megalotis.JAEUCK010005147.1                    I 13 I 4
s Ovis_aries.CM001607.2                                   17588086 73 +  44047080 TAttagaaa-agaa---agcagatg--t--G------GAAG------TAGCAG-GC-A-A---CTGAC----CTCTC-CACTA-CTA---AT-C-AGGG-TATGG-A-AAA---T----A
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      176076 73 -    191736 TGTTAGAAA-AGAA---AGCAGATG--T--G------GAAG------TAGCAG-GC-A-A---CTGAC----CTCTC-CACTA-CTA---AT-C-AGGG-TATGG-A-AAA---T----A
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    47810 76 +     80009 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATGG-GTGAA---T----A
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.KZ622849.1                                 25999 76 +    110857 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATGG-GTGAA---T----A
i Pan_troglodytes.KZ622849.1                             I 55 I 370
s Panthera_onca.PanOnc_flattened_line_3271                  152892 49 +    230217 ------------------------------------------------AGCGT-GC-A-A---GCGAC----CTCTC-AATCA-TGA---GT-C-AGGG-AATAGGG-AAA---T-AGGT
i Panthera_onca.PanOnc_flattened_line_3271               I 13 I 4
s Panthera_pardus.KV860321.1                                266203 49 +  18783137 ------------------------------------------------AGCGT-GC-A-A---GCGAC----CTCTC-AATCA-TGA---GT-C-AGGG-AATAGGG-AAA---T-AGGT
i Panthera_pardus.KV860321.1                             I 13 I 4
s Panthera_tigris.KE722367.1                               4723029 49 -   8748460 ------------------------------------------------AGCGT-GC-A-A---GCGAC----CTCTC-AATCA-TGA---GT-C-AGGG-AATAGGG-AAA---T-GGGT
i Panthera_tigris.KE722367.1                             I 13 I 4
s Pantholops_hodgsonii.KE114653.1                          1266983 73 -   2937107 TGttagaaa-agaa---agcagatg--t--g------GAAG------TAGCAG-GC-A-A---CTGAC----CTCTC-CACTA-CTA---AT-C-AGGG-tatgg-a-aaa---t----a
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183446899 76 + 183742232 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAC-AC-A-A---GTGAC----CTCTC-CATCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10549 76 +     20448 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAC-AC-A-A---GTGAC----CTCTC-CATCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567357 76 +  20919399 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAC-AC-A-A---GTGAC----CTCTC-CATCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   9289 76 +     41871 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAC-AC-A-A---GTGAC----CTCTC-CATCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12582 76 +     27711 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAC-AC-A-A---GTGAC----CTCTC-CATCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3581 76 -     11374 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAC-AC-A-A---GTGAC----CTCTC-CATCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14335 53 -     78924 ------------------------------------------------AGCAT-GC-A-A---GTGACAAGACTTTC-AATTA-TGG---GT-C-AGGT-AATGGGG-AAA---T-AGGA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 13 C 0
s Peromyscus_maniculatus.KI615324.1                       18197468 68 -  18517816 TGCTAAGAA-TGAG----------C--AGAAGCCCT-GAGG------GAATGT-AC-C-A---CAGGC----CTCCC-CGTT--GCA---AGCC-AAG-GAGTAG-A-------------
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_221660                      622 73 -      2102 CAT-GGGAA-AG--AA-AGCAGAGA--AGCT------GCGG------TAGTGT-GC-A-A---GCG----GCCTCTC-TATC--CTA---GA-G-GAC--GCTGG-GTAAA---A----A
i Petromus_typicus.PetTyp_scaffold_221660                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              10843 78 +     63832 TCTTAGAAA-AGAA---AGCAGATGTGT--G------GAAG------TAGGAT-TC-A-A---GTGAC----GTCTC-TATCA-CTA---AT-C-AAGG-AATGG-A-AAA---T-ACGA
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            1900 76 +     68526 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-GC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AACAG-GCAAA---T----A
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        42046 76 +     89929 CATGAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-GC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AACAG-GCAAA---T----A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43460 76 +     51399 CATGAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-GC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AACAG-GCAAA---T----A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299697 76 -  14605196 CATGAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-GC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AACAG-GCAAA---T----A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3569 73 +     22620 CAGAAGGAG-GGGA---AGGGGAGC--T--G------GAAG-T-----AGCAC-AC-A-G---GTGAC----CTCTT-TACCA-CTA---AC-C-AGGG-AGTGA-G-AGA---T----A
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 3
s Pithecia_albicans.k141_1476471                              5346 77 +     26961 CATCAGGAA-AAAC---AGCAGAGG--TGCT------GACG------TCACAT-AC-A-C---GTGAC----CTCTC-TGCCA-CTACTAGT-C-AGGG-AATGG-ATGAA---------
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1491 77 +     23417 CATCAGGAA-AAAC---AGCAGAGG--TGCT------GACG------TCACAT-AC-A-C---GTGAC----CTCTC-TGCCA-CTACTAGT-C-AGGG-AATGG-ATGAA---------
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                5338 77 +     29694 CATCAGGAA-AAAC---AGCAGAGG--TGCT------GACG------TCACAT-AC-A-C---GTGAC----CTCTC-TGCCA-CTACTAGT-C-AGGG-AATGG-ATGAA---------
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          30364 77 +     52772 CATCAGGAA-AAAC---AGCAGAGG--TGCT------GACG------TCACAT-AC-A-C---GTGAC----CTCTC-TCCCA-CTACTAGT-C-AGGG-AATGG-ATGAA---------
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           5360 77 +     26198 CATCAGGAA-AAAC---AGCAGAGG--TGCT------GACG------TCACAT-AC-A-C---GTGAC----CTCTC-TCCCA-CTACTAGT-C-AGGG-AATGG-ATGAA---------
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3941908 77 +   4542175 CATCAGGAA-AAAC---AGCAGAGG--TGCT------GACG------TCACAT-AC-A-C---GTGAC----CTCTC-TGCCA-CTACTAGT-C-AGGG-AATGG-ATGAA---------
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            5324 77 -     23490 CATCAGGAA-AAAC---AGCAGAGG--TGCT------GACG------TCACAT-AC-A-C---GTGAC----CTCTC-TCCCA-CTACTAGT-C-AGGG-AATGG-ATGAA---------
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610            147 76 +      7680 TGTTAGAAA-AGAA---AGCAGATG--T--G------GAAG------TAGGAT-GC-A-A---GTGAC----CTCTC-TATCA-CTA---AT-C-AAGG-AATGG-A-AAA---T-ATGA
i Platanista_gangetica.PlaMin_flattened_line_173610      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9578 74 -     39866 CATCAGGAA-GAAC---AGCAGAAG--TGCT------GGCG------TCACAC-AC-A-C---GTGAC----CTCTC-TGCCA-CTA---GT-C-AGGG-AATGG-ATAAA---------
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18744 74 +     34906 CATCAGGAA-GAAC---AGCAGAAG--TGCT------GGCG------TCACAC-AC-A-C---GTGAC----CTCTC-TGCCA-CTA---GT-C-AGGG-AATGG-ATAAA---------
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       23006 74 +     87950 CATCAGGAA-GAAC---AGCAGAAG--TGCT------GGCG------TCACAC-AC-A-C---GTGAC----CTCTC-TGCCA-CTA---GT-C-AGGG-AATGG-ATAAA---------
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23835 74 +     88961 CATCAGGAA-GAAC---AGCAGAAG--TGCT------GGCG------TCACAC-AC-A-C---GTGAC----CTCTC-TGCCA-CTA---GT-C-AGGG-AATGG-ATAAA---------
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9506 74 +     39403 CATCAGGAA-GAAC---AGCAGAAG--TGCT------GGCG------TCACAC-AC-A-C---GTGAC----CTCTC-TGCCA-CTA---GT-C-AGGG-AATGG-ATAAA---------
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          23287 74 -     87928 CATCAGGAA-GAAC---AGCAGAAG--TGCT------GGCG------TCACAT-AC-A-C---GTGAC----CTCTC-TGCCA-CTA---GT-C-AGGG-AATGG-ATAAA---------
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         30246 74 +     60166 CATCAGGAA-GAAC---AGCAGAAG--TGCT------GGCG------TCACAC-AC-A-C---GTGAC----CTCTC-TGCCA-CTA---GT-C-AGGG-CATGG-ATAAA---------
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30443 74 +     67232 CATCAGGAA-GAAC---AGCAGAAG--TGCT------GGCG------TCACAC-AC-A-C---GTGAC----CTCTC-TGCCA-CTA---GT-C-AGGG-AATGG-ATAAA---------
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          25916 74 +     90634 CATCAGGAA-GAAC---AGCAGAAG--TGCT------GGCG------TCACAC-AC-A-C---GTGAC----CTCTC-TGCCA-CTA---GT-C-AGGG-AATGG-ATAAA---------
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          23288 74 -     89403 CATCAGGAA-GAAC---AGCAGAAG--TGCT------GGCG------TCACAC-AC-A-C---GTGAC----CTCTC-TGCCA-CTA---GT-C-AGGG-CATGG-ATAAA---------
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189159427 76 + 189387572 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TTGCAT-AC-A-A---GTGAC----CTCTC-TAGCC-CTA---CT-C-AGAG-AATGG-GTGAA---T----A
i Pongo_abelii.CM009266.2                                I 24609 T 24568
s Pongo_pygmaeus.ctg66                                     9574427 76 +   9816681 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TTGCAT-AC-A-A---GTGAC----CTCTC-TAGCC-CTA---CT-C-AGAG-AATGG-GTGAA---T----A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               77000 76 -     81375 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8817 76 +     19060 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            12599 64 -     21651 TGTTAGG-----AG----------C--AGAAACTCT-CAGG------GAATGG-GC-C-A---CAACC----CTTCC-CACC--ACA---ATCC-AAA-GGGTAG-G-------------
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteropus_alecto.KB030862.1                              22978550 76 +  28871421 CCTTCGGAA-AAAA---AGCAGACT-T---G------AAAG-----C-AGCAT-GC-A-A---GTGAC----TTCTT-CACCA-TTA---AT-C-AGAG-AATAA-G-AACTACT----A
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1361555 76 +   4952924 CCTTCGGAA-AAAA---AGCAGACT-T---G------AAAG-----C-AGCAT-GC-A-A---GTGAC----TTCTT-CACCA-TTA---AT-C-AGAG-AATAA-G-AACTACT----A
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20276088 49 -  38429054 ------------------------------------------------AGCGT-GC-A-A---GCGAC----CTCTC-AATCA-TGA---GT-C-AGGG-AATAGGG-AAA---T-AGGA
i Puma_concolor.QAVW01001104.1                           I 13 C 0
s Pygathrix_cinerea.k141_1153803                             18809 76 -     91421 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7612932 76 +   7812017 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18839 76 -     72585 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  8311 73 +     55207 TGTTAGAAA-AGAA---AGCAGATG--T--G------GAAG------TGGCAT-GT-A-A---ATGAC----CTCTC-CACTA-CTA---AT-C-AGGG-TATGG-A-AAA---T----A
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53572848 63 +  90668790 TGCTGAG-----AG----------C--AGAAACCCT-CAGG------GAGTGT-GT-C-A---CAGAC----CT-CC-TACT--GCA---AGCT-AAG-GGGTAG-G-------------
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        368592 77 -   3329780 CATTAGGAA-AGAA---AGCAGACT-CT--G------AGAG-T-----AGCAT-GC-A-G---GTGGC----CTCTC-CACCG-CTA---GT-C-AGGG-AATGG-G-AACTACG----A
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                            10507 76 -     11128 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239875 76 - 195417433 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675522 76 +   7961872 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89621 76 -     96226 CCTTAGGAA-AGAA---AGCAGACT-T---G------AAAG-----C-AGCAT-GC-A-G---GTGAC----TTCTT-CACCA-TTA---AT-C-AGAG-AATAA-G-AACTACT----A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Semnopithecus_entellus.k141_1672505                         3681 76 -     12572 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---G----A
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30533 76 +     39453 CATTAGGAA-GGAC---AGCAAAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---G----A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           11041 76 +     27826 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---G----A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10582 76 -     19483 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---G----A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3880 76 -     12762 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---G----A
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3725 76 +     13763 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---G----A
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     2479 74 -     30804 TACTAAGAA-AGAG----------A--AGCACCTCT-GAGGGTAAAAGAATGT-GA-C-A---CAGCC----CTCCA-CATC--ACA---AGCT-AAG-GGATAG-A-------------
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1955874 75 -   3870691 GCTCAGGAA-AGAG---AGTACAAA--AGCT------GGTA------CGGTGT-GC-A-A---GCGAC----CTCTC-TAGC--CCA---GT-C-AAG-GGACGG-GCAAA---C----A
i Spermophilus_dauricus.KZ294078.1                       C 0 I 6
s Suricata_suricatta.SurSur_flattened_line_6629              20322 49 -    196729 ------------------------------------------------AGCAT-GC-A-A---GCAAC----CTCTC-AATCC-TGA---GT-C-AGGA-AATGGGG-AGA---AGAG-A
i Suricata_suricatta.SurSur_flattened_line_6629          I 12 C 0
s Sus_scrofa.CM000828.4                                    6813423 73 +  69701581 GGTTAGGAA-AGAC---AGCAGACA--T--G------CAAG------TAGCAT-GC-A-A---GTGAC----GTCTC-TACTA-CTA---CT-C-AGAG-AATGG-G-AAA---T----A
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                12949 76 +     41958 CAGAAGGAA-GGAA---AGCTGAGC--T--G------CAAG-T-----AGCAG-GC-A-GATGGTGGC----CTCTT-TCCCC-CTA---AT-C-AGGG-AGTGG-G-GAA---T----A
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 3
s Tarsius_lariang.k141_2201908                               27476 74 +     70052 -ATCCGGAA-GAA-----GCAGAGT--TGCT------GACG------CCATGT-GC-C-A---GTG-A----CTCTC-CACTG-CT----CT-C-AGAG-GATGA-GGAAA---C-AGGA
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                2273 74 -     16117 -ATCCGGAA-GAA-----GCAGAGT--TGCT------GACG------CCATGT-GC-C-A---GTG-A----CTCTC-CACTG-CT----CT-C-AGAG-GATGA-GGAAA---C-AGGA
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186432205 76 + 186847797 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAC-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---T----A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              107297 74 +    114563 CCC-TGGAA-AG--GA-AGCAGAGA--ATCT------GCAA------TAGTGT-GC-A-A---GCG--A--CCTCTC-CATC--CTA---GT-A-GAG--AATGG-GGAAA---A---TA
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 21
s Trachypithecus_auratus.k141_722599                         14619 76 -     20410 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---G----A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3742 76 -     12674 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---G----A
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14727 76 +     19930 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---G----A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      11129 76 -     19997 CATTCGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---G----A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            51270 76 -     60166 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---G----A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18733 76 -     27529 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---G----A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                        365 76 +      9229 CATTCGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---G----A
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          12267 76 -     21137 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---G----A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                     367 76 +      9131 CATTCGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---G----A
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                          331 76 -      3730 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---G----A
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28599 76 +     32220 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---G----A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942696 76 +   6242583 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---G----A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       11948 76 +     20839 CATTAGGAA-GGAC---AGCAGAGG--TGCT------GACA------TCACAT-AC-A-A---GTGAC----CTCTC-TACCC-CTA---GT-C-AGGG-AATAG-GTAAA---G----A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    2206 73 +     27266 TGTCAGAAA-AGAA---AGCAGACA--T--G------CAAG------TAGCAG-GC-A-A---GTGAC----CTCTC-CACCA-CTA---AT-C-AGAG-TACAG-A-GAA---T----A
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tupaia_chinensis.KB320699.1                              2157848 76 +   4065304 CCTTAGGGA-AGAC---GGCAGAGA--CGCT------GATG------TAGCAG-GC-A-A---GCGCC----CTCTC-CACCA-CCA---CG-C-AGGG-AATGT-TCAAA---T----A
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_306982                     271 76 -      4186 CCTTAGGGA-AGAC---GGCAGAGA--CGCT------GATG------TAGCAG-GC-A-A---ACACC----CTCTC-CACCA-CCA---CA-C-GGGG-AATGT-TCAAA---T----A
i Tupaia_tana.TupTan_flattened_line_306982               C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15740029 76 +  33153633 TGttagaaa-agaa---agcagatg--t--g------GAAG------TAGGAT-TC-A-A---GTGAC----GTCTC-TATCA-CTA---AT-C-AAGG-AATGG-A-AAA---T-ACGA
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Vicugna_pacos.KN270157.1                                 5373711 76 -   5488506 cgttagaaa-agaa---agtagaag--t--g------AAAG------TTGCAT-GC-A-A---GTGAC----CTCTC-TACCA-CCA---AT-C-AGGG-AATGG-G-AAA---T-GGGA
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 12717 27 -     43706 ------------------------------------------------AGCAT-G--A-A---GGGAT----GTCTC-TACTA-TTA---G-----------------------------
i Vulpes_lagopus.VulLag_flattened_line_30954             I 13 I 20
s Xerus_inauris.XerIna_scaffold_2302                          2867 74 +    224448 GCTCAGGAA-AGAG---AGTACAGA--AGCT------GGTG------TAGTGT-GT-A-A---GCAAC----CTCTC-TATG--CTA---GT-C-AAG-G-ATGG-GCAAA---C----A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 6
s Zapus_hudsonius.ZapHud_scaffold_11398                      16500 58 +     63895 -----------------A-----GA--AGCT------AAGG------TAGTGT-GC-C-A---GAGAG----CTCTC-CATC-ACAA---GT-C-AAA-GACTAG-GCAAA---T----A
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_761354             332 76 -      1267 TGTTAGAAA-AGAA---AGCAGATG--T--G------GAAG------TAGGAT-GC-A-A---GTGAC----CTCTC-TGTCA-CTA---AT-C-AAGG-AATGG-A-AAA---T-ATGA
i Ziphius_cavirostris.ZipCav_flattened_line_761354       C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Uropsilus_gracilis.UroGra_scaffold_12083                   54925 394 -     77625 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tonatia_saurophila.TonSau_scaffold_294                     83098  2 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_85600                    4490  2 +     18632 I
e Tapirus_terrestris.TapTer_scaffold_755                    388291 19 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      119821 19 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Sorex_araneus.JH798187.1                                13652641 429 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    154809 432 -    313613 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Pteronotus_parnellii.KE909381.1                            16825  2 -     21811 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                        67149665 1414 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Octodon_degus.JH651603.1                                  749216 44 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Noctilio_leporinus.NocLep_scaffold_251                    759530  2 +    783361 I
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 143344  2 -    366855 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Micronycteris_hirsuta.MicHir_scaffold_52381                17753  2 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Manis_pentadactyla.KN006162.1                              52445  9 -    317179 I
e Manis_javanica.JSZB01003497.1                              20301  9 +    737560 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     8427 743 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Jaculus_jaculus.JH725527.1                               8278673 121 -   9596543 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               34467 19 +    498745 I
e Equus_caballus.CM000403.2                               18532438 19 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1284631 19 +   4378816 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    7115 19 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  674363 19 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8632007  2 +  20541912 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            69437  2 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Crocidura_indochinensis.CroInd_scaffold_239572              3398  0 -      5012 I
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Condylura_cristata.JH655891.1                           17549953 974 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            6415  2 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3542 19 -     25243 I
e Carollia_perspicillata.CarPer_scaffold_92756                7006  2 -     11696 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6662  2 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Anoura_caudifer.AnoCau_scaffold_1412                      187255  2 +    412891 I
e Allactaga_bullata.AllBul_scaffold_9566                     75924 121 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T

a score=0.000000
s hg38.chrUn_KI270753v1                                      10540 42 +     62944 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
s Acinonyx_jubatus.LLWD01001279.1                           829123 38 -   1699592 G------GAG-AG---TATC-TTATAAG----T--G--CAGAC----TGAAGT--A-----GAATGT-----G-----
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 1
s Acomys_cahirinus.AcoCah_scaffold_12655                     73006 56 +     87051 GAAATACAAG-AG---GACT-TTGAAAG-CA---TG--AAACC----TTAGATCTAA-TGAGATTGT-----CACTG-
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   18401 42 -     52922 G------AAG-AG---TTTT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         18338 42 -     28001 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8833 42 -     18505 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9686 42 -     12518 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             10142 42 +     51355 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATAT-----GATTGT
i Alouatta_belzebul.k141_3560514                         I 2 C 0
s Alouatta_caraya.k141_1701091                                3249 42 -     36483 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GATTGT
i Alouatta_caraya.k141_1701091                           I 2 C 0
s Alouatta_discolor.k141_566626                              13702 42 +     28687 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATAT-----GATTGT
i Alouatta_discolor.k141_566626                          I 2 C 0
s Alouatta_juara.k141_1302312                                 2174 42 +     27940 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GATTGT
i Alouatta_juara.k141_1302312                            I 2 C 0
s Alouatta_macconnelli.k141_918386                            3253 42 -      9457 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GATTGT
i Alouatta_macconnelli.k141_918386                       I 2 C 0
s Alouatta_nigerrima.k141_1929159                             2211 42 +     30492 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GATTGT
i Alouatta_nigerrima.k141_1929159                        I 2 C 0
s Alouatta_palliata.k141_2135620                              6206 42 +     47717 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GATTGT
i Alouatta_palliata.k141_2135620                         I 2 C 0
s Alouatta_puruensis.k141_362188                              2942 42 +      5663 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GATTGT
i Alouatta_puruensis.k141_362188                         I 2 C 0
s Alouatta_seniculus.k141_117119                             17393 42 +     50774 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GATTGT
i Alouatta_seniculus.k141_117119                         I 2 C 0
s Ammotragus_lervia.NIVO01071767.1                          677875 48 -   2318259 GGAA---AGG-AG---CATT-TTGAAAG--AGT--G--CAAAT----TGAAGT--A-----GAATGG-----GATTGT
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303               316 48 -     32520 a---taaata-aa---aaaa-ttaaaag--agt--t--caaat----tgaa-------gtagaaCAG-----GATTGT
i Antilocapra_americana.AntAmePen_scaffold_43303         N 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      14474 39 +     20879 ----------------AATT-TTAACAG--A----ATGAAAAT----AAAAGT--A-----GAATGA-----TGCTGT
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 3 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21210406 42 -  21539123 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GATTGT
i Ateles_geoffroyi_b.tarseq_1536                            I 2 C 0
s Ateles_belzebuth.k141_445860                               45202 42 -     48001 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GATTGT
i Ateles_belzebuth.k141_445860                           I 2 C 0
s Ateles_chamek.k141_1806455                                 28006 42 -     30947 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GATTGT
i Ateles_chamek.k141_1806455                             I 2 C 0
s Ateles_geoffroyi_a.k141_833924                                9778 42 -     89868 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GATTGT
i Ateles_geoffroyi_a.k141_833924                           I 2 C 0
s Ateles_marginatus.k141_803263                              14162 42 -     40414 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GATTGT
i Ateles_marginatus.k141_803263                          I 2 C 0
s Ateles_paniscus.k141_457735                                22051 42 +     72325 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GATTGT
i Ateles_paniscus.k141_457735                            I 2 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193727 45 +  23207421 G------AGG-AG---CATT-TTGAAAG--AGT--G--CAAAT----TGAAGT--A-----GAATGT-----GACTGT
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         4192 45 -     18090 G------AGG-AG---CATT-TTGAAAG--AGT--G--CAAAT----TGAAGT--A-----GAATGT-----GACTGT
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    28958 48 +     34529 GGAA---AGG-AG---CATT-TTGAAAA--AGT--G--CAAAT----TGAAGT--A-----GAATGG-----GATTGT
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    202965 48 -    288883 GGAA---AGG-AG---CATT-TTGAAAG--AGT--G--CAAAT----TGAAGT--A-----GAATGG-----GATTGT
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20276205 48 +  48749331 NGAA---AGG-AG---CATN-TTGAAAG--AGT--G--CAAAT----TGAAGT--A-----GAATGG-----GATTGT
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1128758 48 -   1948126 GGAA---AGG-AG---CATT-TTGAAAG--AGT--G--CAAAT----TGAAGT--A-----GAATGG-----GATTGT
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18086843 48 +  45695690 a---gaaagg-ag---CATT-TTGAAAG--AGT--G--CAAAT----TGAAGT--A-----GAATGG-----GATTGT
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2822803 48 +   4408762 GGAA---AGG-AG---CATT-TTGAAAG--AGT--G--CAAAT----TGAAGT--A-----GAATGG-----GATTGT
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                103027 42 -    122966 G------AAG-AG---TATG-TGGAGAG--AAC--G--AAAAT----CAAA----------GAATGT-----GATTGT
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   62530 42 +     81800 G------AAG-AG---TATG-TGGAGAG--AAC--A--AAAAT----CAAA----------GAATGT-----GATTGT
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31712 42 -     95584 G------AAG-AG---TATG-TGGAGAG--AAC--G--AAAAT----CAAA----------GAATGT-----GATTGT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55813 42 -    119600 G------AAG-AG---TATG-TGGAGAG--AAC--G--AAAAT----CAAA----------GAATGT-----GATTGT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10004266 45 -  17673402 G------AGG-AG---CATT-TTGAAAG--AGT--G--CAAAT----TGGAGT--A-----GAATGT-----GACTGT
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2336738 45 -   7040546 G------AGG-AG---CATT-TTGAAAG--AGT--G--CAAAT----TGGAGT--A-----GAATGT-----GACTGT
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  405036 45 -   1652518 G------AGG-AG---CATT-TTGAAAG--AGT--G--CAAAT----TGGAGT--A-----GAATGT-----GACTGT
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17801146 36 -  60362399 -----------AG---CATT-TTAAAAGAG--T--G--CAGAT----TGGTGT--A-----GAATGT-----G-----
i CanFam4.chr16                                          I 1 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     1889 36 -     43241 -----------AG---CATT-TTAAAAGAG--T--G--CAGAT----TGGTGT--A-----GAATGT-----G-----
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 1 I 1
s Canis_lupus_dingo.QKWQ01000480.1                         9036589 36 -   9314153 -----------AG---CATT-TTAAAAGAG--T--G--CAGAT----TGGTGT--A-----GAATGT-----G-----
i Canis_lupus_dingo.QKWQ01000480.1                       I 1 I 1
s Canis_lupus_familiaris.chr16                            17961060 36 -  59632846 -----------AG---CATT-TTAAAAGAG--T--G--CAGAT----TGGTGT--A-----GAATGT-----G-----
i Canis_lupus_familiaris.chr16                           I 1 I 1
s Canis_lupus_orion.HG994398.1                            18502362 36 +  63665305 -----------AG---CATT-TTAAAAGAG--T--G--CAGAT----TGGTGT--A-----GAATGT-----G-----
i Canis_lupus_orion.HG994398.1                           I 1 I 1
s Capra_aegagrus.CM003241.1                               18831980 48 +  46296322 GGAA---AGG-AG---CATG-TTGAAAG--AGT--G--CAAAT----TGAAGT--A-----GAATGG-----GATTGT
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18062700 48 -  44709034 GGAA---AGG-AG---CATG-TTGAAAG--AGT--G--CAAAT----TGAAGT--A-----GAATGG-----GATTGT
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    3052 51 -     12242 AGA---GAAG-AG---CATT-TGGAACT--C--ATG--CAAAT----TAAG--C-AA----GGATAAGACAAGAC--T
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           157054 49 -    496798 G------AAG-AG---AAtt-ttgaaac--aat--a--aaaagtaaataaa-------ttagaattT-----GAATAT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    139021 47 +    179628 GGA---GAAG-AG---AATT-TTGAAAA--A--GTG--AAAAT----TAAGAT--A-----AA-TGA-----AACTTT
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     95909 48 +    217609 G------GAG-AGGTATATT-TTGAAAG--AGT--G--CAAAT----TGATGT--A-----GAATGT-----GACCGC
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18351608 48 -  23392119 AGCA---AAG-AG---CATT-TAGATCA--A--GTG--GAAAT----TAAG-T--AA----GAATGA-----TTCTCT
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18363868 48 -  23407841 AGCA---AAG-AG---CATT-TAGATCA--A--GTG--GAAAT----TAAG-T-TA-----GAATGA-----TTCTCT
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                       102750 48 +    143979 AGCA---AAG-AG---CATT-TAGATCA--A--GTG--GAAAT----TAAG-T-TA-----GAATGA-----TTCTCT
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         6553 49 +     31688 G------AAG-AG---AATT-TTGAAAC--AAT--A--AAAAGTAAATAAA-T-TA-----GAATTT-----GAATAT
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12232534  1 +  27778364 -------------------------------------------------------------------------a----
i Ceratotherium_simum.JH767749.1                         I 19 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3561  1 -     25243 -------------------------------------------------------------------------a----
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 19 I 1
s Cercocebus_atys.KQ010504.1                               4479360 42 +   4669795 G------AAG-AG---TATT-TGGAGAG--AAT--G--GAAAT----CAAA----------GAATGG-----GACTGT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3854 42 +     17872 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGG-----GACTGT
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4449 42 -     14043 G------AAG-AG---TATT-TGGAGAG--AAT--G--GAAAT----CAAA----------GAATGG-----GACTGT
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12544 42 +     27781 G------AAG-AG---TATT-TGGAGAG--AAT--G--GAAAT----CAAA----------GAATGG-----GACTGT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12698 42 -     20310 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15674 42 +     29689 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10434 42 -     20078 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          18349 42 -     27936 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            7220 42 -     17152 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826944 42 +  39242232 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226452 42 -  21565898 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43571 42 -     53127 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3821 42 +     13442 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       18367 42 -     27947 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1396 42 +     10558 G------AAG-AG---TATC-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4401 42 +     14005 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1631 42 -     17098 G------AAG-AG---CATG-CGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GATTGT
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1507 42 +     17877 G------AAG-AG---CATG-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GATTGT
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            159074 42 -    216457 G------AAG-AG---CATG-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GATTGT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63549 42 +     76511 G------AAG-AG---CATG-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GATTGT
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254704 48 +   2543920 AGA---GAAG-AA---CATT-TAGAACA--A--GTG--AAAAT----TAAG-T-TA-----GGATGA-----GATTCT
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_israelita.k141_747660                          100156 42 +    146308 G------AAG-AG---TATG-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GATTGT
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          31963 42 -     50570 G------AAG-AG---TATG-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GATTGT
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18432271 42 -  18827391 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18768 42 -     50209 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425772 42 + 135778131 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1914273 42 +   2368649 G------AAG-AG---TATT-TGGAGAG--GAT--G--AAAAT----CAAA----------GAACGT-----GACTGT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952521 42 + 200372422 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAACGT-----GACTGT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40794 42 +     84244 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAACGT-----GACTGT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           2155 45 +     23735 A------AAG-AG---CATT-CTGAAAG--AGT--G--CAAAC----TGAA-GC-A-----GAATGT-----AACTGT
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 52264 53 +     63868 GAAATAGAAG-AG---GATT-TTGAAAG-CA---CG--AAATT----TAAGATCTAA----CATTGT-----CACTG-
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             30304 38 -     87169 G------GAG-AG---CATT-TTACAAG----T--G--CAGAA----TGAAGT--A-----GAATGT-----G-----
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 1
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  37985 43 +     51376 AGA---GA----A---CATT-TAGAACA--C--ATG--GGAAT----TAAG-TC-A-----GGATAA-----GAC--T
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900             1686 48 -     75252 GGAA---AAG-AG---CATT-TAGAACA--A--CTG--AAAGT----TAAA-T-TA-----GGATGA-----TGCTCT
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16813611 45 +  35494412 G------AGG-AG---CATT-TTGAAAG--AGT--G--CAAAT----TGAAGT--A-----GAATGT-----GACTGT
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  674382  1 +   1390856 -------------------------------------------------------------------------a----
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 19 I 1
s Diceros_bicornis.DicBicMic_scaffold_5955                    7134  1 +    198055 -------------------------------------------------------------------------a----
i Diceros_bicornis.DicBicMic_scaffold_5955               I 19 I 1
s Dinomys_branickii.DinBra_scaffold_21862                    38194 48 +     67921 A---GGGAAG-AC---CATT-TAGAACA--A--CTG--GATAT----TAAG-T-TA-----GGATGA-----GGTTCT
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 35324 48 -     42551 GGCA---AGG-AG---CATT-TAGAACA--A--GTG--CAAGT----TAAG-T-TA-----GAATGA-----TACTCT
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.AWHC01278734.1                                376 45 +      2334 G------AAG-AA---CATT-TTGAAAG--AGT--G--CAAAT----TAAAGT--A-----GAATGT-----GACTGT
i Eidolon_helvum.AWHC01278734.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       313747 48 +    607251 GGAA---AGG-AG---CATT-TTGAAAG--AGC--G--CAAAT----TGAAGT--A-----GAACAG-----GATTGT
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          22780 46 -    110024 -----------AA---GATT-TTGAAAG-CA---TG--AAATT----TAAGATCTAA-TGAGCTTGT-----CACTG-
i Ellobius_lutescens.LOEQ01008920.1                      I 7 C 0
s Ellobius_talpinus.LOJH01081419.1                            2700 46 +      8657 -----------AG---GATT-TTGAAAG-CA---TG--AAATT----TAAGATCTAA-TGAGCTTGT-----CACTG-
i Ellobius_talpinus.LOJH01081419.1                       I 7 C 0
s Eptesicus_fuscus.JH977646.1                              2148875 45 -  14770903 G------AAG-AG---CATT-TTGAAAG--ATC--A--CAATT----CGAAGT------G-GAAGGT-----AACTGT
i Eptesicus_fuscus.JH977646.1                            I 3 C 0
s Equus_asinus.JREZ01000139.1                              1284650  1 +   4378816 -------------------------------------------------------------------------a----
i Equus_asinus.JREZ01000139.1                            I 19 I 1
s Equus_caballus.CM000403.2                               18532457  1 -  39960074 -------------------------------------------------------------------------a----
i Equus_caballus.CM000403.2                              I 19 I 1
s Equus_przewalskii.KK951119.1                               34486  1 +    498745 -------------------------------------------------------------------------a----
i Equus_przewalskii.KK951119.1                           I 19 I 1
s Erythrocebus_patas.Contig38                             21208944 42 -  21539334 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           13040 45 +    133382 G------AGG-AG---CATT-TTGAAAG--AGT--G--CAAAT----TGAAGT--A-----GAATGT-----GACTGT
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             26986 45 -     44125 G------AGG-AG---CATT-TTGAAAG--AGT--G--CAAAT----TGAAGT--A-----GAATGT-----GACTGT
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20238867 38 + 206538554 G------GAG-AG---TATC-TTATAAG----T--G--CAGAC----TGAAGT--A-----GAATGT-----G-----
i Felis_catus.CM001381.2                                 C 0 I 1
s Felis_catus_fca126.CM031415.1                           20197742 38 + 205367284 G------GAG-AG---TATC-TTATAAG----T--G--CAGAC----TGAAGT--A-----GAATGT-----G-----
i Felis_catus_fca126.CM031415.1                          C 0 I 1
s Felis_nigripes.FelNig_flattened_line_20823                 11402 38 -     36744 G------GAG-AG---TATC-TTATAAG----T--G--CAGAC----TGAAGT--A-----GAATGT-----G-----
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 1
s Fukomys_damarensis.KN121974.1                             852324 48 +   3816255 GGA---GAAG-AG---CATG-TAGAAAG--A--GTA--AAACC----TAAG-T-TA-----GAATGT-----GACTCT
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               4155 45 -      9135 G------AAG-AG---CATT-ATGAAAA--AAT--A--AAAAT----TAAA-GCT------CAGTGT-----GACTGT
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     610983 46 -    660261 g---aaaagg-ag---CATT-TTA--AG--AGT--T--CAAAT----TGAAGT--A-----GAATGG-----GATTGT
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            33123 46 +     49224 GGA---GAAA-AG---CATC-GTGAAAC--A----G--AAAAT----TAAGGT--A-----GATTGT-----GGCTGC
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              19785 42 -     32273 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341921 42 + 186649187 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Gorilla_gorilla.LT578341.1                             I 76 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   35139 46 +     78134 GGAA---AAA-AG---CATT-GTGAAAC--A----G--GAGAT----TAACGT--A-----GAGTGT-----GGCTGC
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               244111 38 +    327341 G------GAG-AC---CATT-TTACAAG----T--G--CAGAT----TGAA-------GGAGAATGT-----G-----
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 1
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 20192 48 +     36099 GGAA---AGG-AG---CACG-TTGAAAG--AGT--G--CAAAT----TGAAGT--A-----GAATGG-----GATTGG
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20663965 48 +  22651954 GGAA---AAG-AG---CATG-TAGAAAG--A--GTG--AAAAT----TAAG-T-TA-----GAATGA-----GACTCT
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       112215 45 +   1711038 G------AAG-AG---TATT-TTAAAAG--AGT--T--CAAAT----TGAAGT--A-----AACTAT-----AACTAT
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188                780 45 +      9903 G------AAG-AG---TATT-TTTAAAG--AGT--T--CAAAT----TGAAGT--A-----AACTAT-----AACTAT
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 C 0
s Hoolock_leuconedys.ctg274                                    438580 42 +    630532 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GGATGT-----GACTGT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46850 39 +     55795 G------GAG-AG---TATTTTTACAAG----T--G--CAGAT----TGAAGT--A-----GAATGT-----G-----
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 1
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23659 48 -    143317 GGCA---AAG-AG---CATT-TAGAACA--A--GTG--GAAAT----TAAG-T-TA-----GGATGA-----TACTCT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84900 41 +    135385 -----------AG---CATT-TAGAAAG--A--GTG--AAAAT----TAAG-T-T----G-GAATGA-----GACTCT
i Hystrix_cristata.HysCri_scaffold_5660                  I 4 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7522798 39 -   7955117 ----------------CACT-TTAACAG--a----gtaaaaat----taaa-------gtagaatgC-----AACTGt
i Ictidomys_tridecemlineatus.JH393364.1                  I 6 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                 817 45 -     31341 G------AGG-AG---CATT-TTGAAAG--AGT--G--CAAAT----TGAAGT--A-----GAATGT-----GACTGT
i Inia_geoffrensis.IniGeo_flattened_line_34779           I 19 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                  562 45 -     18011 G------AGC-AA---CATT-TTGAAAG--AGT--G--CAAAT----TGAAGT--A-----GAATGC-----GACTGT
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         16210 42 -     38430 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GATTGT
i Lagothrix_lagothricha.k141_1005387                     I 2 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    18583 45 -     42476 G------AAG-AG---CATT-CTGAAAG--AGC--A--CAACT----CAAA-GC-A-----GAATGT-----AACTGT
i Lasiurus_borealis.LasBor_scaffold_32767                I 29 C 0
s Lipotes_vexillifer.KE559953.1                             269872 45 -    662738 G------AGG-GG---CATT-TTGAAAG--AGT--G--CAAAT----TGAAGT--A-----GAATGT-----GACTGT
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1440902 42 +   1826925 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17957300 36 -  59628241 -----------AG---CATT-TTAAAAGAG--T--G--CAGAT----TGGTGT--A-----GAATGT-----g-----
i Lycaon_pictus.CM007581.1                               I 1 I 1
s Macaca_arctoides.k141_2326796                              10712 42 +     40492 G------AAG-AG---TATT-TGGAGAG--AGT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59679966 42 +  60120075 G------AAG-AG---TATT-TGGAGAG--AGT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16483 42 -     26193 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            84259 42 -    114318 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9950 42 -     23192 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19414 42 -     29190 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  27992 42 +     37952 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186843069 42 + 187317192 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461647 42 -  25927173 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83848 42 +     89720 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10841 42 +     20474 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10638 42 -     14993 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333500 42 -    668171 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8950 42 -     24072 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29581 42 -     45290 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92543 42 +     94391 G------A----A---CATT-TTGAAAG--AGT--G--CAAAT----TAAAGT--A-----GAATGT-----GACTGT
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23941169 42 -  24302211 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355285 42 +    752769 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33105088 39 -  40650429 ----------------CACT-TTAACAG--A----GTAAAAAT----TAAGGT--A-----GAATGC-----AACTGt
i Marmota_marmota.CZRN01000018.1                         I 6 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        15048 45 -    207569 G------AAG-AG---CATT-TTGAAAG--AGT--A--CCATC----TGAAGTC-------GAACGT-----TGTTGT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 49
s Meriones_unguiculatus.MerUng_scaffold_7390                 35022 55 +    140813 GAACTAGAAA-AG---GACA-TTGAAAG-CA---TG--AAATT----TAAGATCTAG-TGAGACTGT-----CACA--
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12184488 46 -  29670104 -----------AG---GATT-TTGAAAG-CA---TG--AAATT----TAAGATTTAA-TGAGGTTGG-----CACTG-
i Mesocricetus_auratus.KB708134.1                        I 10 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    5253 45 +     10310 G------AGC-AG---CATT-TTGAAAG--AGT--G--CAAAT----TAAAGT--A-----GAATGT-----GACTGT
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11262753 46 -  27267610 -----------AG---AATT-GTGAAAG-CA---TG--AAATT----TAAGATCTAA-TGAGCCTGT-----CACCA-
i Microtus_ochrogaster.CM001695.1                        I 7 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1852079 45 +   8254450 G------AAG-AG---CATT-CTGGAAG--AGC--A--CAGAT----CGGAGT------G-GAATGT-----GACAGT
i Miniopterus_natalensis.LDJU01000034.1                  I 3 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             35763 45 +     64694 G------AAG-AG---CATT-CCGGAAG--AGC--A--CAGAT----CGGAGT------G-GAATGT-----GACAGT
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 3 C 0
s Miopithecus_ogouensis.k141_534055                          12849 42 -     28506 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    28996 45 -    437263 G------AGG-AG---CATT-TTGAAAG--AGT--G--CAAAT----TGAAGT--A-----GAATGT-----GACTGT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   3028 48 +     82753 GGAA---AGG-AG---CGTC-TTGAAAG--AGT--G--CAAAT----TGAAGT--A-----GAATGG-----GATTGT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           8838 45 +     14753 G------AAG-AG---CATT-TTGAAAG--AGC--A--CAAAT----CAAAGT------G-ATATAT-----AACTGT
i Murina_feae.MurFea_scaffold_85699                      I 3 C 0
s Mus_caroli.LT608237.1                                   84363412 56 - 120012414 GAAATAGAGT-AG---GATT-TGGAAAG-CA---TG--AAATT----TAAGATCTAA-TGAGATTGT-----CACTG-
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87652912 56 - 129401213 GAAATAGAGG-AG---GATT-TGGAAAG-CA---TG--AAATT----TAAGATCTAA-TGAGATTGT-----CACTG-
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31357624 56 -  89631738 gaaacagagg-ag---gatt-TGGAAAG-CG---TG--AGATT----TAAGATCTAA-TGAGATTGC-----CACTG-
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90755401 56 - 130317789 GAAATAGAGG-AG---GATT-TGGAAAG-CA---TG--AAATT----TAAGATCTAA-TGAGATTGT-----CACTG-
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              6616 46 +     14296 GGA---GTAA-AG---CATT-GTGAAAC--A----G--AAAAT----TAAGGT--A-----AACTGT-----GGCTGA
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     73242 46 -     80779 AGA---GAAG-AG---CATT-TAGAACA--C--ATG--GAAAT----TAAG--CTA-----GGATAA-----GAC--T
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                282580 45 -  10118263 G------AAG-AG---CGTT-TTGAAAG--AGC--A--CAGAT----CGAAGT------G-GAATGT-----AACTGT
i Myotis_brandtii.KE162005.1                             I 3 C 0
s Myotis_davidii.KB100139.1                                1589896 45 -   6019432 g------aag-ag---aatt-ttaaaag--agc--a--CAAAT----CGAAGT------G-GAATGT-----AACTAT
i Myotis_davidii.KB100139.1                              I 3 C 0
s Myotis_lucifugus.GL429869.1                              3906012 45 -   4330536 G------AAG-AG---CGTT-TTGAAAG--AGC--A--CAGAT----CGAAGT------G-GAATGT-----AACTGT
i Myotis_lucifugus.GL429869.1                            I 3 C 0
s Myotis_myotis.MyoMyo_scaffold_44643                          311 45 +     25416 G------AAG-AG---CATT-CTGAAAG--AGC--A--CAAAT----CGAAGT------G-GAACGT-----AACTAT
i Myotis_myotis.MyoMyo_scaffold_44643                    I 4 C 0
s Nannospalax_galili.KL204047.1                            2037213 53 -   3037898 GGA---GAAT-GG---CATT-TTGAAAG-TG---TG--AAAGT----TAAGAT-TAAATGAGACTGC-----AGCTG-
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               18899 42 +     21681 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5867959 45 +   7148211 G------AGG-AG---CATT-TTGAAAG--AGT--G--CAAAT----TGAAGT--A-----GAATGT-----GACTGT
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9151236 36 -   9404916 -----------ag---caTT-TTAAAAGAG--T--G--CAGAT----TGGTGT--A-----GAATGT-----G-----
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 20 I 1
s Ochotona_princeps.JH802162.1                             1366081 46 +   3988456 GGA---GAAG-AG---CATT-TTGAGAG--A----G--TGAAA----ACACAT------G-GAACCT-----GTCTCT
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         146549 48 +    630418 GGAA---AGG-AG---CATT-TTGAAAG--AGC--A--CAAAT----TGAAAT--A-----GAATGG-----GATTGT
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          78885 48 -    150152 GGAA---AGG-AG---CATT-TTAAAAG--CGT--T--CAAAT----TGAAGT--A-----GAATGG-----GATTGT
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   27421 46 +     28053 -----------AG---GATT-TTGAAAG-CA---TG--AAATT----TAAGATCTAA-TGAGCTTGT-----CACCA-
i Ondatra_zibethicus.OndZib_scaffold_46174               I 7 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    82791 23 +    102263 GAAGTAGAAG-AG---GATT-TTGAAAG--------------------------------------------------
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 20
s Orcinus_orca.KB316932.1                                  2783853 44 -  10937097 G------AGG--G---CATT-TTGAAAG--AGT--G--CAAAT----TGAAGT--A-----GAATGT-----GACTGT
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       464324 36 -    559221 -----------AG---CATT-TTAAAAGAG--T--G--CAGAT----TGGTGT--A-----GAATGT-----G-----
i Otocyon_megalotis.JAEUCK010005147.1                    I 4 I 1
s Ovis_aries.CM001607.2                                   17588159 48 +  44047080 GGAA---AGG-AG---CATT-TTGAAAG--AGT--G--CAAAT----TGAAGT--A-----GAATGG-----GATTGG
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      176149 48 -    191736 GGAA---AGG-AG---CACT-TTGAAAG--AGT--G--CAAAT----TGAAGT--A-----GAATGG-----GATTGG
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    47886 42 +     80009 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146745 42 + 189151597 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Pan_troglodytes.CM009242.2                             I 73 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152945 30 +    230217 ------------------TT-TTATAAG----T--G--CCGAC----TGAAGT--A-----GAATGT-----G-----
i Panthera_onca.PanOnc_flattened_line_3271               I 4 I 1
s Panthera_pardus.KV860321.1                                266256 30 +  18783137 ------------------TT-TTATAAG----T--G--CCGAC----TGAAGT--A-----GAATGT-----G-----
i Panthera_pardus.KV860321.1                             I 4 I 1
s Panthera_tigris.KE722367.1                               4723082 30 -   8748460 ------------------TT-TTATAAG----T--G--CCGAC----TGAAGT--A-----GAATGT-----G-----
i Panthera_tigris.KE722367.1                             I 4 I 1
s Pantholops_hodgsonii.KE114653.1                          1267056 48 -   2937107 t---gaaagg-aG---CATT-TTGAAAG--AGT--G--CAAAT----TGAAGT--A-----GAATGG-----GATTGT
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183446975 42 + 183742232 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10625 42 +     20448 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567433 42 +  20919399 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   9365 42 +     41871 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12658 42 +     27711 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3657 42 -     11374 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14388 38 -     78924 G------GAG-AG---CGAT-ATATGAG----T--G--CGGAC----TGAAGT--A-----GAATGT-----G-----
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 1
s Peromyscus_maniculatus.KI615324.1                       18197536 56 -  18517816 GAAATAGAAG-AG---Gatt-ttgaaag-ca---tg--aaatt----taatATCTAA-TGAGGTTGT-----CACTG-
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_221660                      695 47 -      2102 GGAA---GAG-AG---CATG-GAGACAG--A--GTG--AA-AT----TAAA-T-TA-----GAAGGA-----CACTCT
i Petromus_typicus.PetTyp_scaffold_221660                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              10921 45 +     63832 G------AGG-AG---CATT-TTGAAAG--AGT--G--CAAAT----TGAAGT--A-----GAATGT-----GACTGT
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            1976 42 +     68526 G------AAG-AG---TGTT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAACGT-----GACTGT
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        42122 42 +     89929 G------AAG-AG---TGTT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAACGT-----GACTGT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43536 42 +     51399 G------AAG-AG---TGTT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAACGT-----GACTGT
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299773 42 -  14605196 G------AAG-AG---TGTT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAACGT-----GACTGT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3645 45 +     22620 G------AAG-AG---GATT-TTGAAAG--AGC--A--CAAAT----CGAAGT------G-GAATGT-----AATTGT
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 3 C 0
s Pithecia_albicans.k141_1476471                              5423 42 +     26961 G------AAG-AG---TATG-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GATTGT
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1568 42 +     23417 G------AAG-AG---TATG-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GATTGT
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                5415 42 +     29694 G------AAG-AG---TATG-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GATTGT
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          30441 42 +     52772 G------AAG-AG---TATG-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GATTGT
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           5437 42 +     26198 G------AAG-AG---TATG-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GATTGT
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3941985 42 +   4542175 G------AAG-AG---TATG-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GATTGT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            5401 42 -     23490 G------AAG-AG---TATG-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GATTGT
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610            223 45 +      7680 G------AGG-AG---CATT-TTAAAAG--AGT--G--CAAAT----TGAAGT--A-----GAATGT-----GACTGT
i Platanista_gangetica.PlaMin_flattened_line_173610      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9652 42 -     39866 G------AAG-AG---CACG-TGGAGAG--AAT--G--AAGAT----CAAA----------GAATGT-----GATTGT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18818 42 +     34906 G------AAG-AG---CATG-TGGAGAG--AAT--G--AAGAT----CAAA----------GAATGT-----GATTGT
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       23080 42 +     87950 G------AAG-AG---CACG-TGGAGAG--AAT--G--AAGAT----CAAA----------GAATGT-----GATTGT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23909 42 +     88961 G------AAG-AG---CACG-TGGAGAG--AAT--G--AAGAT----CAAA----------GAATGT-----GATTGT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9580 42 +     39403 G------AAG-AG---CACG-TGGAGAG--AAT--G--AAGAT----CAAA----------GAATGT-----GATTGT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          23361 42 -     87928 G------AAG-AG---CACG-TGGAGAG--AAT--G--AAGAT----CAAA----------GAATGT-----GATTGT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         30320 42 +     60166 G------AAG-AG---CACG-TGGAGAG--AAT--G--AAGAT----CAAA----------GAATGT-----GATTGT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30517 42 +     67232 G------AAG-AG---CACA-TGGAGAG--AAT--G--AAGAT----CAAA----------GAATGT-----GATTGT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          25990 42 +     90634 G------AAG-AG---CACG-TGGAGAG--AAT--G--AAGAT----CAAA----------GAATGT-----GATTGT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          23362 42 -     89403 G------AAG-AG---CACG-TGGAGAG--AAT--G--AAGAT----CAAA----------GAATGT-----GATTGT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.NDHI03003595.1                                 5728 42 -     34550 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Pongo_abelii.NDHI03003595.1                            I 117 I 452
s Pongo_pygmaeus.ctg66                                     9574503 42 +   9816681 G------AAG-AG---TATT-CGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               77076 42 -     81375 G------AAG-AG---TAAT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8893 42 +     19060 G------AAG-AG---TAAT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            12663 55 -     21651 GAACTAGAAA-AG---GGCT-TTGAAAG-CA---TG--AAATT----TAAGATCTAA-TGAGACTGT-----CACA--
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteropus_alecto.KB030862.1                              22978626 45 +  28871421 G------AAG-AA---CATT-TTGAAAG--AGT--G--CAAAT----TAAAGT--A-----GAATGT-----GACTGT
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1361631 45 +   4952924 G------AAG-AA---CATT-TTGAAAG--AGT--G--CAAAT----TAAAGT--A-----GAATGT-----GACTGT
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20276137 38 -  38429054 G------GAG-AG---TATC-TTATAAG----T--G--CAGAC----TGAAGT--A-----GAATGT-----G-----
i Puma_concolor.QAVW01001104.1                           C 0 I 1
s Pygathrix_cinerea.k141_1153803                             18885 42 -     91421 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7613008 42 +   7812017 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18915 42 -     72585 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  8384 48 +     55207 GGAA---AGG-AG---CATT-TTGAAAG--AGC--G--CAAAT----TGAAGT--A-----GAATGG-----GATTGT
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53572911 56 +  90668790 GAAATAGAGG-AG---GATT-TGGAAAG-CA---TG--AAATT----TAAGAACTAA-TGAGGTTGT-----CACTG-
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        368669 43 -   3329780 G------AAG-AG---CATT-TT--AAG--AGT--A--CGATT----AAAAGT--A-----GACTGT-----AACTAT
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                            10583 42 -     11128 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAC----------TAATGT-----GACTGT
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239951 42 - 195417433 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAC----------TAATGT-----GACTGT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675598 42 +   7961872 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89697 45 -     96226 G------AAG-AA---CATT-TTGAAAG--AGT--G--CAAAT----TAAAGT--A-----GAACGT-----GACTGT
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Semnopithecus_entellus.k141_1672505                         3757 42 -     12572 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30609 42 +     39453 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           11117 42 +     27826 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10658 42 -     19483 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3956 42 -     12762 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3801 42 +     13763 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     2553 56 -     30804 AAAATAGAAG-AG---GATT-TTAAGAA-CA---TA--AAATT----TAAGGCCTAA-TGAGGCTGT-----CACTA-
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1955955 39 -   3870691 ----------------CACT-TTAACAC--a----gtaaaaat----taaa-------gtagaatgC-----AACTgt
i Spermophilus_dauricus.KZ294078.1                       I 6 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              20371 38 -    196729 G------CAG-AG---CATT-TTACAAG----G--G--CTGAT----TGAA-------GGAGAATGT-----G-----
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 1
s Sus_scrofa.CM000828.4                                    6813496 48 +  69701581 G------GAG-AGGTACATT-TTGAAAG--AGT--G--CAAAT----TGATGT--A-----GAATGT-----GACTGT
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                13028 44 +     41958 G------AAG-AG---CAT--GTGAAAG--AGT--A--CAAAT----CGAAGT------G-GAATGT-----GACTGT
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 3 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      119840  1 -    156842 -------------------------------------------------------------------------a----
i Tapirus_indicus.TapInd_scaffold_9301                   I 19 I 1
s Tapirus_terrestris.TapTer_scaffold_755                    388310  1 +    539355 -------------------------------------------------------------------------a----
i Tapirus_terrestris.TapTer_scaffold_755                 I 19 I 1
s Tarsius_lariang.k141_2201908                               27550 49 +     70052 G------AAG-AG---AATT-TTGAAAC--AAT--A--AAAAGTAAATAAA-T-TA-----GAATTT-----GATTAT
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                2347 49 -     16117 G------AAG-AG---AATT-TTGAAAC--AAT--A--AAAAGTAAATAAA-T-TA-----GAATTT-----GATTAT
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186432281 42 + 186847797 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAG----------GAATGT-----GACTGT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              107392 24 +    114563 -----------------------------------G--AA-AT----TAAG-T-TA-----GAGTGA-----GACTCT
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 21 C 0
s Trachypithecus_auratus.k141_722599                         14695 42 -     20410 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3818 42 -     12674 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14803 42 +     19930 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      11205 42 -     19997 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            51346 42 -     60166 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18809 42 -     27529 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                        441 42 +      9229 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          12343 42 -     21137 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                     443 42 +      9131 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                          407 42 -      3730 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28675 42 +     32220 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942772 42 +   6242583 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       12024 42 +     20839 G------AAG-AG---TATT-TGGAGAG--AAT--G--AAAAT----CAAA----------GAATGT-----GACTGT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    2279 48 +     27266 GGA---GAGG-GG---CAAT-TTGAAAG--AGT--G--CAAAT----TGAAGT--A-----GAATGT-----GATTGT
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tupaia_chinensis.KB320699.1                              2157924 45 +   4065304 G------AAG-AG---TATT-Tcgtaag--aaa--g--aaaat----ttaa-------tttgaatGT-----GACTAC
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_306982                     347 45 -      4186 G------AAG-AG---TATT-TCGTAAG--AAA--G--AAAAT----TTAA-T-T---T--GAATGT-----GACTAC
i Tupaia_tana.TupTan_flattened_line_306982               C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15740105 45 +  33153633 G------AGG-AG---CATT-TTGAAAG--AGT--G--CAAAT----TGAAGT--A-----GAATGT-----GACTGT
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Vicugna_pacos.KN270157.1                                 5373787 45 -   5488506 G------AGG-AG---CATT-CTGAAAG--AGT--G--CAAAT----TGGAGT--A-----GAATGT-----GACTGT
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 12764 36 -     43706 -----------AG---CATT-TTAAAAGAG--T--G--CAGAT----TGGTGT--A-----AAATGT-----G-----
i Vulpes_lagopus.VulLag_flattened_line_30954             I 20 I 1
s Xerus_inauris.XerIna_scaffold_2302                          2947 39 +    224448 ----------------CACT-TTAACAG--A----GTAAAAAT----TAAAGT--A-----GAATGT-----AGCTGT
i Xerus_inauris.XerIna_scaffold_2302                     I 6 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      16558 43 +     63895 AGAA---AAT-CA---CATT-TTGAAAG--A--GTG--AAAAT----TAAAGT-T------GAATGA-----G-----
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_761354             408 45 -      1267 G------AGC-AG---CATT-TTGAAAG--AGT--A--CAAAT----TAAAGT--A-----GAATGT-----GACTGT
i Ziphius_cavirostris.ZipCav_flattened_line_761354       C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Uropsilus_gracilis.UroGra_scaffold_12083                   54925 394 -     77625 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tonatia_saurophila.TonSau_scaffold_294                     83098  2 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_85600                    4490  2 +     18632 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Sorex_araneus.JH798187.1                                13652641 429 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    154809 432 -    313613 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Pteronotus_parnellii.KE909381.1                            16825  2 -     21811 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                        67149665 1414 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Octodon_degus.JH651603.1                                  749216 44 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Noctilio_leporinus.NocLep_scaffold_251                    759530  2 +    783361 I
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 143344  2 -    366855 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Micronycteris_hirsuta.MicHir_scaffold_52381                17753  2 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Manis_pentadactyla.KN006162.1                              52445  9 -    317179 I
e Manis_javanica.JSZB01003497.1                              20301  9 +    737560 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     8427 743 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Jaculus_jaculus.JH725527.1                               8278673 121 -   9596543 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Desmodus_rotundus.KZ672289.1                             8632007  2 +  20541912 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            69437  2 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Crocidura_indochinensis.CroInd_scaffold_239572              3398  0 -      5012 I
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Condylura_cristata.JH655891.1                           17549953 974 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            6415  2 -      8501 I
e Carollia_perspicillata.CarPer_scaffold_92756                7006  2 -     11696 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6662  2 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Anoura_caudifer.AnoCau_scaffold_1412                      187255  2 +    412891 I
e Allactaga_bullata.AllBul_scaffold_9566                     75924 121 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T

a score=0.000000
s hg38.chrUn_KI270753v1                                      10582 8 +     62944 CAC--A--GAG--T
s Acinonyx_jubatus.LLWD01001279.1                           829162 2 -   1699592 --------G----T
i Acinonyx_jubatus.LLWD01001279.1                        I 1 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     73062 4 +     87051 --G--A--G----G
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   18443 8 -     52922 CAC--A--GAG--T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         18380 8 -     28001 CAC--A--GAG--T
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8875 8 -     18505 CAC--A--GAG--T
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9728 8 -     12518 CAC--A--GAG--T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             10184 8 +     51355 CAC--A--GAG--T
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                3291 8 -     36483 CAC--A--GAG--T
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13744 8 +     28687 CAC--A--GAG--T
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 2216 8 +     27940 CAC--A--GAG--T
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            3295 8 -      9457 CAC--A--GAG--T
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             2253 8 +     30492 CAC--A--GAG--T
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              6248 8 +     47717 CAC--A--GAG--T
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              2984 8 +      5663 CAC--A--GAG--T
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             17435 8 +     50774 CAC--A--GAG--T
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          677923 8 -   2318259 CAC--AGTG----T
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303               364 8 -     32520 CAC--CGTG----T
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      14513 8 +     20879 CAC--A--G--AAT
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21210448 8 -  21539123 CAC--A--GAG--T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               45244 8 -     48001 CAC--A--GAG--T
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 28048 8 -     30947 CAC--A--GAG--T
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9820 8 -     89868 CAC--A--GAG--T
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              14204 8 -     40414 CAC--A--GAG--T
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                22093 8 +     72325 CAC--A--GAG--T
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193772 8 +  23207421 CAA--GGTA----C
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         4237 8 -     18090 CAA--GGTA----C
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    29006 8 +     34529 CAC--AGTG----T
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    203013 8 -    288883 CAC--AGTG----T
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20276253 8 +  48749331 CAC--AGTG----T
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1128806 8 -   1948126 CAC--AGTG----T
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18086891 8 +  45695690 CAC--AGTG----T
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2822851 8 +   4408762 CAC--AGTG----T
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                103069 8 -    122966 CAC--A--GAG--T
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   62572 8 +     81800 CAC--A--GAG--T
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31754 8 -     95584 CAC--A--GAG--T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55855 8 -    119600 CAC--A--GAG--T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10004311 8 -  17673402 Tac--agtg----t
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2336783 8 -   7040546 Tac--agtg----t
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  405081 8 -   1652518 Tac--agtg----t
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17801183 2 -  60362399 --------G----T
i CanFam4.chr16                                          I 1 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     1926 2 -     43241 --------G----T
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 1 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9036626 2 -   9314153 --------g----t
i Canis_lupus_dingo.QKWQ01000480.1                       I 1 C 0
s Canis_lupus_familiaris.chr16                            17961097 2 -  59632846 --------g----t
i Canis_lupus_familiaris.chr16                           I 1 C 0
s Canis_lupus_orion.HG994398.1                            18502399 2 +  63665305 --------g----t
i Canis_lupus_orion.HG994398.1                           I 1 C 0
s Capra_aegagrus.CM003241.1                               18832028 8 +  46296322 CGC--AGTG----T
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18062748 8 -  44709034 CGC--AGTG----T
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    3103 8 -     12242 CAC--A--G--AGT
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           157103 8 -    496798 Cac--a--gag--t
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    139068 8 +    179628 CACAAA--G----T
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     95957 8 +    217609 CAC--AGAG----T
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18351656 8 -  23392119 CAT--A--G--AGT
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18363916 8 -  23407841 CAT--A--G--AGT
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                       102798 8 +    143979 CAT--A--G--AGT
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         6602 8 +     31688 CAC--A--GAG--T
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12232536 2 +  27778364 --------g----T
i Ceratotherium_simum.JH767749.1                         I 1 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3563 2 -     25243 --------g----t
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 1 C 0
s Cercocebus_atys.KQ010504.1                               4479402 8 +   4669795 Cac--a--gag--t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3896 8 +     17872 CAC--A--GAG--T
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4491 8 -     14043 CAC--A--GAG--T
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12586 8 +     27781 CAC--A--GAG--T
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12740 8 -     20310 CAC--A--GAG--T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15716 8 +     29689 CAC--A--GAG--T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10476 8 -     20078 CAC--A--GAG--T
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          18391 8 -     27936 CAC--A--GAG--T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            7262 8 -     17152 CAC--A--GAG--T
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826986 8 +  39242232 CAC--A--GAG--T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226494 8 -  21565898 CAC--A--GAG--T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43613 8 -     53127 CAC--A--GAG--T
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3863 8 +     13442 CAC--A--GAG--T
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       18409 8 -     27947 CAC--A--GAG--T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1438 8 +     10558 CAC--A--GAG--T
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4443 8 +     14005 CAC--A--GAG--T
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1673 8 -     17098 CAC--A--GAG--T
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1549 8 +     17877 CAC--A--GAG--T
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            159116 8 -    216457 CAC--A--GAG--T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63591 8 +     76511 CAC--A--GAG--T
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254752 8 +   2543920 GGt--a--g--aat
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_israelita.k141_747660                          100198 8 +    146308 CAC--A--GAG--T
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          32005 8 -     50570 CAC--A--GAG--T
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18432313 8 -  18827391 CAC--A--GAG--T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18810 8 -     50209 CAC--A--GAG--T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425814 8 + 135778131 CAc--a--gag--t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1914315 8 +   2368649 Cac--a--gag--t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952563 8 + 200372422 CAC--A--GAG--T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40836 8 +     84244 CAC--A--GAG--T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           2200 8 +     23735 CAC--AGTG----T
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 52317 4 +     63868 --G--A--A----T
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             30343 2 -     87169 --------G----T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 1 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  38028 8 +     51376 TAT--A--G--AGC
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900             1734 8 -     75252 CAT--A--G--AGT
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16813656 8 +  35494412 CAA--AGTG----T
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  674384 2 +   1390856 --------G----T
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 1 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    7136 2 +    198055 --------g----t
i Diceros_bicornis.DicBicMic_scaffold_5955               I 1 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    38242 8 +     67921 CAT--G--G--AAT
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 35372 8 -     42551 CAT--A--G--AGT
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.AWHC01278734.1                                421 7 +      2334 CAC--AGTG-----
i Eidolon_helvum.AWHC01278734.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       313795 8 +    607251 CAC--AGTG----A
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          22826 4 -    110024 --T--A--G----T
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                            2746 4 +      8657 --G--A--G----T
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2148920 8 -  14770903 CAC--AGCA----T
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1284652 2 +   4378816 --------g----t
i Equus_asinus.JREZ01000139.1                            I 1 C 0
s Equus_caballus.CM000403.2                               18532459 2 -  39960074 --------g----t
i Equus_caballus.CM000403.2                              I 1 C 0
s Equus_przewalskii.KK951119.1                               34488 2 +    498745 --------g----t
i Equus_przewalskii.KK951119.1                           I 1 C 0
s Erythrocebus_patas.Contig38                             21208986 8 -  21539334 CAC--A--GAG--T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           13085 8 +    133382 CAA--AGTG----C
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             27031 8 -     44125 CAA--AGTG----C
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20238906 2 + 206538554 --------G----T
i Felis_catus.CM001381.2                                 I 1 C 0
s Felis_catus_fca126.CM031415.1                           20197781 2 + 205367284 --------G----T
i Felis_catus_fca126.CM031415.1                          I 1 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 11441 2 -     36744 --------G----T
i Felis_nigripes.FelNig_flattened_line_20823             I 1 C 0
s Fukomys_damarensis.KN121974.1                             852372 8 +   3816255 CAc--a--g--agt
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               4200 6 -      9135 CAT--A--G----T
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     611029 8 -    660261 CAC--AGTG----T
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            33169 6 +     49224 CAC--A--G----T
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              19827 8 -     32273 CAC--A--GAG--T
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341963 8 + 186649187 CAC--a--gag--t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   35185 6 +     78134 CAC--A--G----T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               244150 2 +    327341 --------G----T
i Helogale_parvula.HelPar_flattened_line_2585            I 1 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 20240 8 +     36099 TGC--AGTG----T
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20664013 8 +  22651954 ccc--a--g--aat
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       112260 8 +   1711038 CAT--Agtg----t
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188                825 8 +      9903 CAT--AGCG----T
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 C 0
s Hoolock_leuconedys.ctg274                                    438622 8 +    630532 CAC--A--GAG--T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46890 2 +     55795 --------G----T
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 1 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23707 8 -    143317 CAT--C--G--AGT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84941 8 +    135385 CAC--A--G--AGT
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7522837 8 -   7955117 cac--a--g--aat
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                 862 8 -     31341 CAA--AGTG----T
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                  607 8 -     18011 CAA--AGTG----T
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         16252 8 -     38430 CAC--A--GAG--T
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    18628 8 -     42476 CAC--AGCA----T
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 10
s Lipotes_vexillifer.KE559953.1                             269917 8 -    662738 CAA--AGTG----T
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1440944 8 +   1826925 CAC--A--GAG--T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17957337 2 -  59628241 --------g----t
i Lycaon_pictus.CM007581.1                               I 1 C 0
s Macaca_arctoides.k141_2326796                              10754 8 +     40492 CAC--A--GAG--T
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59680008 8 +  60120075 CAC--A--GAG--T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16525 8 -     26193 CAC--A--GAG--T
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            84301 8 -    114318 CAC--A--GAG--T
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                  9992 8 -     23192 CAC--A--GAG--T
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19456 8 -     29190 CAC--A--GAG--T
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  28034 8 +     37952 CAC--A--GAG--T
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186843111 8 + 187317192 Cac--a--gag--t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461689 8 -  25927173 Cac--a--gag--t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83890 8 +     89720 CAC--A--GAG--T
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10883 8 +     20474 CAC--A--GAG--T
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10680 8 -     14993 CAC--A--GAG--T
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333542 8 -    668171 CAC--A--GAG--T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 8992 8 -     24072 CAC--A--GAG--T
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29623 8 -     45290 CAC--A--GAG--T
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92585 7 +     94391 CAC--AGTG-----
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23941211 8 -  24302211 CAC--A--GAG--T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355327 8 +    752769 CAC--A--GAG--T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33105127 8 -  40650429 cac--a--g--aat
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        15142 8 -    207569 AAC--AGTG----T
i Megaderma_lyra.MegLyr_scaffold_4542                    I 49 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 35077 4 +    140813 --A--A--G----T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12184534 4 -  29670104 --G--A--G----T
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    5298 8 +     10310 CAA--AGTG----T
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11262799 4 -  27267610 --G--A--G----T
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1852124 8 +   8254450 GAC--AGCA----T
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             35808 8 +     64694 GAC--AGCA----T
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                          12891 8 -     28506 CAC--A--GAG--T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    29041 8 -    437263 CAA--AGTG----T
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   3076 8 +     82753 CAC--AATG----T
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           8883 3 +     14753 CAC-----------
i Murina_feae.MurFea_scaffold_85699                      C 0 I 2
s Mus_caroli.LT608237.1                                   84363468 4 - 120012414 --G--A--G----T
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87652968 4 - 129401213 --A--A--G----T
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31357680 4 -  89631738 --G--A--G----T
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90755457 4 - 130317789 --G--A--A----T
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              6662 6 +     14296 CAC--A--G----T
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     73288 8 -     80779 TAT--A--G--GGT
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                282625 8 -  10118263 CAC--AGCA----T
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1589941 8 -   6019432 CAC--AGCA----T
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3906057 8 -   4330536 CAC--AGCA----T
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_44643                          356 8 +     25416 CAC--AGCA----T
i Myotis_myotis.MyoMyo_scaffold_44643                    C 0 C 0
s Nannospalax_galili.KL204047.1                            2037266 4 -   3037898 --T--a--g----c
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               18941 8 +     21681 CAC--A--GAG--T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5868004 8 +   7148211 CAA--AGTG----T
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9151273 2 -   9404916 --------g----t
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 1 C 0
s Ochotona_princeps.JH802162.1                             1366127 6 +   3988456 CAG--A--A----G
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         146597 8 +    630418 CAC--AGTG----A
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          78933 8 -    150152 CAC--AATG----G
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   27467 4 +     28053 --G--A--G----T
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    82834 4 +    102263 --G--A--G----T
i Onychomys_torridus.OnyTor_scaffold_2986                I 20 C 0
s Orcinus_orca.KB316932.1                                  2783897 8 -  10937097 CAA--AGTG----T
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       464361 2 -    559221 --------g----t
i Otocyon_megalotis.JAEUCK010005147.1                    I 1 I 4
s Ovis_aries.CM001607.2                                   17588207 8 +  44047080 CGC--AGTG----T
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      176197 8 -    191736 CGC--AGTG----T
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    47928 8 +     80009 CAC--a--gag--t
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146787 8 + 189151597 CAC--a--gag--t
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152976 2 +    230217 --------G----T
i Panthera_onca.PanOnc_flattened_line_3271               I 1 C 0
s Panthera_pardus.KV860321.1                                266287 2 +  18783137 --------G----T
i Panthera_pardus.KV860321.1                             I 1 C 0
s Panthera_tigris.KE722367.1                               4723113 2 -   8748460 --------G----T
i Panthera_tigris.KE722367.1                             I 1 C 0
s Pantholops_hodgsonii.KE114653.1                          1267104 8 -   2937107 CAC--AGTG----T
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183447017 8 + 183742232 CAc--a--gag--t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10667 8 +     20448 CAC--A--GAG--T
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567475 8 +  20919399 CAC--A--GAG--T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   9407 8 +     41871 CAC--A--GAG--T
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12700 8 +     27711 CAC--A--GAG--T
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3699 8 -     11374 CAC--A--GAG--T
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14427 2 -     78924 --------A----T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 1 C 0
s Peromyscus_maniculatus.KI615324.1                       18197592 4 -  18517816 --G--A--G----T
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_221660                      742 8 -      2102 CAC--T--G--AGC
i Petromus_typicus.PetTyp_scaffold_221660                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              10966 8 +     63832 CAA--AGTG----T
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            2018 8 +     68526 CAC--A--GAG--T
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        42164 8 +     89929 CAC--A--GAG--T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43578 8 +     51399 CAC--A--GAG--T
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299815 8 -  14605196 Cac--a--gag--t
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3690 8 +     22620 CAC--AGCA----T
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pithecia_albicans.k141_1476471                              5465 8 +     26961 CAC--A--GAG--T
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1610 8 +     23417 CAC--A--GAG--T
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                5457 8 +     29694 CAC--A--GAG--T
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          30483 8 +     52772 CAC--A--GAG--T
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           5479 8 +     26198 CAC--A--GAG--T
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3942027 8 +   4542175 CAC--A--GAG--T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            5443 8 -     23490 CAC--A--GAG--T
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610            268 8 +      7680 CAA--AGTG----T
i Platanista_gangetica.PlaMin_flattened_line_173610      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9694 8 -     39866 CAC--A--GAG--T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18860 8 +     34906 CAC--A--GAG--T
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       23122 8 +     87950 CAC--A--GAG--T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23951 8 +     88961 CAC--A--GAG--T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9622 8 +     39403 CAC--A--GAG--T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          23403 8 -     87928 CAC--A--GAG--T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         30362 8 +     60166 CAC--A--GAG--T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30559 8 +     67232 CAC--A--GAG--T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          26032 8 +     90634 CAC--A--GAG--T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          23404 8 -     89403 CAC--A--GAG--T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189134935 8 + 189387572 CAC--a--gag--t
i Pongo_abelii.CM009266.2                                T 24568 C 0
s Pongo_pygmaeus.ctg66                                     9574545 8 +   9816681 CAC--A--GAG--T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               77118 8 -     81375 CAC--A--GAG--T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8935 8 +     19060 CAC--A--GAG--T
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            12718 4 -     21651 --A--A--G----T
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteropus_alecto.KB030862.1                              22978671 7 +  28871421 CAC--AGTG-----
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1361676 7 +   4952924 CAC--AGTG-----
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20276176 2 -  38429054 --------G----T
i Puma_concolor.QAVW01001104.1                           I 1 C 0
s Pygathrix_cinerea.k141_1153803                             18927 8 -     91421 CAC--A--GAG--T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7613050 8 +   7812017 CAC--A--GAG--T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18957 8 -     72585 CAC--A--GAG--T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  8432 8 +     55207 CAC--AGTG----A
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53572967 4 +  90668790 --C--A--G----T
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        368712 8 -   3329780 CAC--tgtg----t
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                            10625 8 -     11128 CAC--A--GAG--T
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91239993 8 - 195417433 CAc--a--gag--t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675640 8 +   7961872 CAC--A--GAG--T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89742 7 -     96226 CAC--AGTG-----
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Semnopithecus_entellus.k141_1672505                         3799 8 -     12572 CAC--A--GAG--T
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30651 8 +     39453 CAC--A--GAG--T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           11159 8 +     27826 CAC--A--GAG--T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10700 8 -     19483 CAC--A--GAG--T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      3998 8 -     12762 CAC--A--GAG--T
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3843 8 +     13763 CAC--A--GAG--T
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     2609 4 -     30804 --G--A--G----T
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1955994 8 -   3870691 cac--a--a--aat
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              20410 2 -    196729 --------G----T
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 C 0
s Sus_scrofa.CM000828.4                                    6813544 8 +  69701581 CAC--AGAG----T
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                13072 8 +     41958 CAC--AGCA----T
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      119842 2 -    156842 --------g----t
i Tapirus_indicus.TapInd_scaffold_9301                   I 1 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    388312 2 +    539355 --------g----t
i Tapirus_terrestris.TapTer_scaffold_755                 I 1 C 0
s Tarsius_lariang.k141_2201908                               27599 8 +     70052 CAC--A--GAG--T
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                2396 8 -     16117 CAC--A--GAG--T
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186432323 8 + 186847797 CAc--a--gag--t
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              107416 8 +    114563 CAC--A--G--ACC
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Trachypithecus_auratus.k141_722599                         14737 8 -     20410 CAC--A--GAG--T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3860 8 -     12674 CAC--A--GAG--T
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14845 8 +     19930 CAC--A--GAG--T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      11247 8 -     19997 CAC--A--GAG--T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            51388 8 -     60166 CAC--A--GAG--T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18851 8 -     27529 CAC--A--GAG--T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                        483 8 +      9229 CAC--A--GAG--T
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          12385 8 -     21137 CAC--A--GAG--T
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                     485 8 +      9131 CAC--A--GAG--T
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                          449 8 -      3730 CAC--A--GAG--T
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28717 8 +     32220 CAC--A--GAG--T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942814 8 +   6242583 CAC--A--GAG--T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       12066 8 +     20839 CAC--A--GAG--T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    2327 8 +     27266 CAC--AGTG----T
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tupaia_chinensis.KB320699.1                              2157969 6 +   4065304 CAc--a--g----a
i Tupaia_chinensis.KB320699.1                            C 0 I 261
s Tupaia_tana.TupTan_flattened_line_306982                     392 6 -      4186 CAC--A--G----A
i Tupaia_tana.TupTan_flattened_line_306982               C 0 I 261
s Tursiops_truncatus.MRVK01000835.1                       15740150 8 +  33153633 CAA--AGTG----T
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Vicugna_pacos.KN270157.1                                 5373832 8 -   5488506 Tac--agtg----t
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 12801 2 -     43706 --------G----T
i Vulpes_lagopus.VulLag_flattened_line_30954             I 1 C 0
s Xerus_inauris.XerIna_scaffold_2302                          2986 8 +    224448 CAA--A--A--AAT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_761354             453 8 -      1267 CAA--AGTG----T
i Ziphius_cavirostris.ZipCav_flattened_line_761354       C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202 0 +      8798 C
e Galago_senegalensis.k141_631886                             7400 0 +     11339 C
e Galago_moholi.ctg2040                                     429710 0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964 2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445 0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734 0 -     33856 C
e Perodicticus_potto.k141_1186926                              597 0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219 0 -      3244 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      16601 0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Uropsilus_gracilis.UroGra_scaffold_12083                   54925 394 -     77625 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tonatia_saurophila.TonSau_scaffold_294                     83098 2 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_85600                    4490 2 +     18632 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Sorex_araneus.JH798187.1                                13652641 429 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    154809 432 -    313613 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Pteronotus_parnellii.KE909381.1                            16825 2 -     21811 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                        67149665 1414 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Octodon_degus.JH651603.1                                  749216 44 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869 0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414 0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947 0 - 196305487 C
e Noctilio_leporinus.NocLep_scaffold_251                    759530 2 +    783361 I
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Mungos_mungo.MunMun_flattened_line_23663                   36398 7 +     37127 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 143344 2 -    366855 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Micronycteris_hirsuta.MicHir_scaffold_52381                17753 2 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Manis_pentadactyla.KN006162.1                              52445 9 -    317179 I
e Manis_javanica.JSZB01003497.1                              20301 9 +    737560 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     8427 743 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Jaculus_jaculus.JH725527.1                               8278673 121 -   9596543 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689 0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Desmodus_rotundus.KZ672289.1                             8632007 2 +  20541912 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            69437 2 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Crocidura_indochinensis.CroInd_scaffold_239572              3398 0 -      5012 I
e Cricetulus_griseus.LT883664.1                           11668671 0 + 224834208 C
e Condylura_cristata.JH655891.1                           17549953 974 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            6415 2 -      8501 I
e Carollia_perspicillata.CarPer_scaffold_92756                7006 2 -     11696 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6662 2 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         538 0 +      5281 C
e Anoura_caudifer.AnoCau_scaffold_1412                      187255 2 +    412891 I
e Allactaga_bullata.AllBul_scaffold_9566                     75924 121 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T

a score=0.000000
s hg38.chrUn_KI270753v1                                      10590 10 +     62944 TAATA-T-TTT-A
s Acinonyx_jubatus.LLWD01001279.1                           829164 10 -   1699592 TAATA-T-TGG-T
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     73066  3 +     87051 TGA----------
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 65
s Allenopithecus_nigroviridis.k141_3361533                   18451 10 -     52922 TAATA-T-TTT-T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         18388 10 -     28001 TAATA-T-TTT-T
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8883 10 -     18505 TAATA-T-TTT-T
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9736 10 -     12518 TAATA-T-TTT-T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             10192 10 +     51355 TAATA-T-TTT-A
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                3299 10 -     36483 TAATA-T-TTT-A
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13752 10 +     28687 TAATA-T-TTT-A
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 2224 10 +     27940 TAATA-T-TTT-A
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            3303 10 -      9457 TAATA-T-TTT-A
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             2261 10 +     30492 TAATA-T-TTT-A
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              6256 10 +     47717 TAATA-T-TTT-A
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              2992 10 +      5663 TAATA-T-TTT-A
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             17443 10 +     50774 TAATA-T-TTT-A
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          677931 10 -   2318259 GAATA-T-TGT-t
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303               372 10 -     32520 GAATG-T-TGT-T
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      14521 10 +     20879 TAATA-TTT-T-A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21210456 10 -  21539123 TAATC-T-TTT-A
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               45252 10 -     48001 TAATA-T-TTT-A
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 28056 10 -     30947 TAATA-T-TTT-A
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9828 10 -     89868 TAATC-T-TTT-A
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              14212 10 -     40414 TAATA-T-TTT-A
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                22101 10 +     72325 TAATA-T-TTT-A
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193780 10 +  23207421 GAATA-T-TGT-T
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         4245 10 -     18090 GAATA-T-TGT-T
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    29014 10 +     34529 GAATA-T-TGT-T
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    203021 10 -    288883 GAATA-T-TGT-T
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20276261 10 +  48749331 GAATA-T-TGT-T
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1128814 10 -   1948126 GAATA-T-TGT-T
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18086899 10 +  45695690 GAATA-T-TGT-T
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2822859 10 +   4408762 GAATA-T-TGT-T
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                103077 10 -    122966 TAATA-T-TTT-A
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   62580 10 +     81800 TAATA-T-TTT-A
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31762 10 -     95584 TAATA-T-TTT-A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55863 10 -    119600 TAATA-T-TTT-A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10004319 10 -  17673402 taata-t-ttt-t
i Camelus_bactrianus.KN276810.1                          C 0 I 6
s Camelus_dromedarius.KN272107.1                           2336791 10 -   7040546 taata-t-ttt-t
i Camelus_dromedarius.KN272107.1                         C 0 I 6
s Camelus_ferus.KB017975.1                                  405089 10 -   1652518 taata-t-ttt-t
i Camelus_ferus.KB017975.1                               C 0 I 6
s CanFam4.chr16                                           17801185 10 -  60362399 TAATA-T-TTT-G
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     1928 10 -     43241 TAATA-T-TTT-G
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9036628 10 -   9314153 taata-t-ttt-g
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17961099 10 -  59632846 taata-t-ttt-g
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18502401 10 +  63665305 taata-t-ttt-g
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18832036 10 +  46296322 GAATA-T-TGT-T
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18062756 10 -  44709034 GAATA-T-TGT-T
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    3111 11 -     12242 CGAAA-TTTTT-A
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           157111 11 -    496798 taatatt-ttt-a
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    139076 11 +    179628 TACTA-TTTTT-A
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     95965 10 +    217609 AAATA-C-TAT-T
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18351664 11 -  23392119 TAATA-TTTTT-A
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18363924 11 -  23407841 TAATA-TTTTT-A
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                       102806 11 +    143979 TAATA-TTTTT-A
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         6610 11 +     31688 TGATATT-TTT-A
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12232538 10 +  27778364 TAAAG-T-TGT-T
i Ceratotherium_simum.JH767749.1                         C 0 I 1451
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           3565 10 -     25243 taaag-t-tgt-t
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 I 1447
s Cercocebus_atys.KQ010504.1                               4479410 10 +   4669795 taata-t-ttt-t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3904 10 +     17872 TAATA-T-TTT-T
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4499 10 -     14043 TAATA-T-TTT-T
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12594 10 +     27781 TAATA-T-TTT-T
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12748 10 -     20310 TAATA-T-TTT-T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15724 10 +     29689 TAATA-T-TTT-T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10484 10 -     20078 TAATA-T-TTT-T
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          18399 10 -     27936 TAATA-T-TTT-T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            7270 10 -     17152 TAATA-T-TTT-T
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38826994 10 +  39242232 TAATA-T-TTT-T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226502 10 -  21565898 TAATA-T-TTT-T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43621 10 -     53127 TAATA-T-TTT-T
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3871 10 +     13442 TAATA-T-TTT-T
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       18417 10 -     27947 TAATA-T-TTT-T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1446 10 +     10558 TAATA-T-TTT-T
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4451 10 +     14005 TAATA-T-TTT-T
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1681 10 -     17098 TAACA-T-TTT-A
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1557 10 +     17877 TAACA-T-TTT-A
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            159124 10 -    216457 TAACA-T-TTT-A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63599 10 +     76511 TAACA-T-TTT-A
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254760 11 +   2543920 gaata-ttttt-a
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_israelita.k141_747660                          100206 10 +    146308 TAATA-T-TTT-A
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          32013 10 -     50570 TAATA-T-TTT-A
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18432321 10 -  18827391 TAATA-T-TTT-T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18818 10 -     50209 TAATA-T-TTT-T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425822 10 + 135778131 taata-t-ttt-t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1914323 10 +   2368649 taata-t-ttt-t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952571 10 + 200372422 TAATA-T-TTT-T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40844 10 +     84244 TAATA-T-TTT-T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           2208 10 +     23735 TACTG-C-TAT-T
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 52321  3 +     63868 TGA----------
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 35
s Cryptoprocta_ferox.CryFer_flattened_line_16129             30345 10 -     87169 TAATA-T-TGG-T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  38036 11 +     51376 AAAAA-TTTTT-A
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900             1742 11 -     75252 TCATA-TTTTT-A
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16813664 10 +  35494412 GAATA-T-TGT-T
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  674386 10 +   1390856 TATAG-T-TGT-T
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 1450
s Diceros_bicornis.DicBicMic_scaffold_5955                    7138 10 +    198055 taaag-t-tgt-t
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 1451
s Dinomys_branickii.DinBra_scaffold_21862                    38250 11 +     67921 TAATG-TTTTG-A
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 35380 11 -     42551 TAATA-TTTTT-A
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.AWHC01278734.1                                428  2 +      2334 ----------T-T
i Eidolon_helvum.AWHC01278734.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       313803 10 +    607251 GAATA-T-TGT-T
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          22830  3 -    110024 TGA----------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 42
s Ellobius_talpinus.LOJH01081419.1                            2750  3 +      8657 TGA----------
i Ellobius_talpinus.LOJH01081419.1                       C 0 I 42
s Eptesicus_fuscus.JH977646.1                              2148928 10 -  14770903 TAACG-T-TGC-T
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1284654 10 +   4378816 taaag-t-tgt-t
i Equus_asinus.JREZ01000139.1                            C 0 I 1466
s Equus_caballus.CM000403.2                               18532461 10 -  39960074 taaag-t-cgt-t
i Equus_caballus.CM000403.2                              C 0 I 1468
s Equus_przewalskii.KK951119.1                               34490 10 +    498745 taaag-t-cgT-T
i Equus_przewalskii.KK951119.1                           C 0 I 1468
s Erythrocebus_patas.Contig38                             21208994 10 -  21539334 TAATA-T-TTT-T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           13093 10 +    133382 GAATA-T-TGT-T
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             27039 10 -     44125 GAATA-T-TGT-T
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20238908 10 + 206538554 TAATA-T-TGG-T
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20197783 10 + 205367284 TAATA-T-TGG-T
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 11443 10 -     36744 TAATA-T-TGG-T
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             852380 11 +   3816255 taata-ttttt-a
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               4206 11 -      9135 TAATA-T-TTTTA
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     611037 10 -    660261 GAATA-T-TGT-T
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            33175 11 +     49224 TAATA-TTTAT-A
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              19835 10 -     32273 TAATA-T-GTT-A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341971 10 + 186649187 taata-t-ttt-a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   35191 11 +     78134 TAATA-TTTCT-A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               244152 10 +    327341 TACTA-T-TGG-T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 20248 10 +     36099 GAATA-T-TGT-T
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20664021 11 +  22651954 taata-ttttt-t
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       112268 10 +   1711038 taata-t-tat-t
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188                833 10 +      9903 TAATA-T-TAT-T
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 C 0
s Hoolock_leuconedys.ctg274                                    438630 10 +    630532 TAATA-T-TTT-A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46892 10 +     55795 TAATA-T-TGG-T
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23715 11 -    143317 TAATA-TTTTT-A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84949 11 +    135385 GAACA-TTTTT-A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7522845 10 -   7955117 taata-ttt-t-a
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                 870 10 -     31341 GAATA-T-TGT-T
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                  615 10 -     18011 GAATA-T-TGT-T
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         16260 10 -     38430 TAATA-T-TTT-A
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_50988                    17414 10 +     29960 TAACA-T-TGC-T
i Lasiurus_borealis.LasBor_scaffold_50988                I 299 I 204
s Lipotes_vexillifer.KE559953.1                             269925 10 -    662738 GAATG-T-TGT-T
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1440952 10 +   1826925 TAATA-T-TTT-T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17957339 10 -  59628241 taata-t-ttt-g
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                              10762 10 +     40492 TAATA-T-TTT-T
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59680016 10 +  60120075 TAATA-T-TTT-T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16533 10 -     26193 TAATA-T-TTT-T
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            84309 10 -    114318 TAATA-T-TTT-T
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 10000 10 -     23192 TAATA-T-TTT-T
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19464 10 -     29190 TAATA-T-TTT-T
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  28042 10 +     37952 TAATA-T-TTT-T
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186843119 10 + 187317192 taata-t-ttt-t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461697 10 -  25927173 taata-t-ttt-t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83898 10 +     89720 TAATA-T-TTT-T
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10891 10 +     20474 TAATA-T-TTT-T
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10688 10 -     14993 TAATA-T-TTT-T
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333550 10 -    668171 TAATA-T-TTT-T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 9000 10 -     24072 TAATA-T-TTT-T
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29631 10 -     45290 TAATA-T-TTT-T
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92592  2 +     94391 ----------T-T
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23941219 10 -  24302211 TAATA-T-TTT-T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355335 10 +    752769 TAATA-T-TTT-T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33105135 10 -  40650429 taata-ttt-t-a
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        15150 10 -    207569 TAATG-T-TGT-T
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 35081  3 +    140813 TGA----------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 40
s Mesocricetus_auratus.KB708134.1                         12184538  3 -  29670104 TGA----------
i Mesocricetus_auratus.KB708134.1                        C 0 I 44
s Mesoplodon_bidens.MesBid_scaffold_108144                    5306 10 +     10310 GAATA-T-TGT-T
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11262803  3 -  27267610 TGA----------
i Microtus_ochrogaster.CM001695.1                        C 0 I 42
s Miniopterus_natalensis.LDJU01000034.1                    1852132 10 +   8254450 TAACA-T-TGT-T
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             35816 10 +     64694 TAACA-T-TGT-T
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                          12899 10 -     28506 TAATA-T-TTT-T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    29049 10 -    437263 GAATA-T-TGT-T
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   3084 10 +     82753 GAATA-T-TGT-T
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           8888 10 +     14753 TAACA-T-CGC-T
i Murina_feae.MurFea_scaffold_85699                      I 2 C 0
s Mus_caroli.LT608237.1                                   84363472  3 - 120012414 TGA----------
i Mus_caroli.LT608237.1                                  C 0 I 41
s Mus_musculus.chr8                                       87652972  3 - 129401213 TGA----------
i Mus_musculus.chr8                                      C 0 I 41
s Mus_pahari.LT608297.1                                   31357684  3 -  89631738 TGA----------
i Mus_pahari.LT608297.1                                  C 0 I 41
s Mus_spretus.CM004101.1                                  90755461  3 - 130317789 TGA----------
i Mus_spretus.CM004101.1                                 C 0 I 41
s Muscardinus_avellanarius.MusAve_scaffold_82313              6668 11 +     14296 TAATA-TTTCT-A
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     73296 11 -     80779 CAAAA-TTTTG-A
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                282633 10 -  10118263 TAACA-T-TGC-T
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1589949 10 -   6019432 TAACA-T-TGC-T
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3906065 10 -   4330536 TAACG-T-TAC-T
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_44643                          364 10 +     25416 TAACA-T-TGC-T
i Myotis_myotis.MyoMyo_scaffold_44643                    C 0 C 0
s Nannospalax_galili.KL204047.1                            2037270  3 -   3037898 taa----------
i Nannospalax_galili.KL204047.1                          C 0 I 1291
s Nasalis_larvatus.k141_413338                               18949 10 +     21681 TAATA-T-TTT-T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5868012 10 +   7148211 GAATA-T-TGT-T
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9151275 10 -   9404916 taata-t-ttt-g
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Ochotona_princeps.JH802162.1                             1366133 10 +   3988456 TAAGA-T-ACT-A
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         146605 10 +    630418 GAATA-T-TGT-T
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          78941 10 -    150152 GAATA-T-TGT-T
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   27471  3 +     28053 TGA----------
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 42
s Onychomys_torridus.OnyTor_scaffold_2986                    82838  3 +    102263 TGA----------
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 74
s Orcinus_orca.KB316932.1                                  2783905 10 -  10937097 GAATA-T-TGT-T
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       464367  6 -    559221 ----a-t-ttt-g
i Otocyon_megalotis.JAEUCK010005147.1                    I 4 C 0
s Ovis_aries.CM001607.2                                   17588215 10 +  44047080 GAATA-T-TGT-T
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      176205 10 -    191736 GAATA-T-TGT-T
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    47936 10 +     80009 taata-t-ttt-a
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146795 10 + 189151597 taata-t-ttt-a
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152978 10 +    230217 TAATA-T-TGG-T
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                266289 10 +  18783137 TAATA-T-TGG-T
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4723115 10 -   8748460 TAATA-T-TGG-T
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1267112 10 -   2937107 GAATA-T-TGT-t
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183447025 10 + 183742232 taata-t-ttt-t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10675 10 +     20448 TAATA-T-TTT-T
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567483 10 +  20919399 TAATA-T-TTT-T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   9415 10 +     41871 TAATA-T-TTT-T
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12708 10 +     27711 TAATA-T-TTT-T
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3707 10 -     11374 TAATA-T-TTT-T
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14429 10 -     78924 TAATA-C-TGG-T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18197596  3 -  18517816 TGA----------
i Peromyscus_maniculatus.KI615324.1                      C 0 I 42
s Petromus_typicus.PetTyp_scaffold_221660                      750 11 -      2102 TAATA-GTTTT-A
i Petromus_typicus.PetTyp_scaffold_221660                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              10974 10 +     63832 GAATA-T-TGT-T
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            2026 10 +     68526 TAATA-T-TTT-T
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        42172 10 +     89929 TAATA-T-TTT-T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43586 10 +     51399 TAATA-T-TTT-T
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299823 10 -  14605196 taata-t-ttt-t
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3698 10 +     22620 TAATA-T-TGC-T
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pithecia_albicans.k141_1476471                              5473 10 +     26961 TAATA-T-TTT-A
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1618 10 +     23417 TAATA-T-TTT-A
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                5465 10 +     29694 TAATA-T-TTT-A
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          30491 10 +     52772 TAATA-T-TTT-A
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           5487 10 +     26198 TAATA-T-TTT-A
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3942035 10 +   4542175 TAATA-T-TTT-A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            5451 10 -     23490 TAATA-T-TTT-A
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610            276 10 +      7680 GAATA-T-TGT-T
i Platanista_gangetica.PlaMin_flattened_line_173610      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9702 10 -     39866 TAATA-T-TTT-C
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18868 10 +     34906 TAATA-T-TTT-C
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       23130 10 +     87950 TAATA-T-TTT-C
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23959 10 +     88961 TAATA-T-TTT-C
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9630 10 +     39403 TAATA-T-TTT-C
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          23411 10 -     87928 TAATA-T-TTT-C
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         30370 10 +     60166 TAATA-T-TTT-C
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30567 10 +     67232 TAATA-T-TTT-C
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          26040 10 +     90634 TAATA-T-TTT-C
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          23412 10 -     89403 TAATA-T-TTT-C
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189134943 10 + 189387572 taata-t-ttt-a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9574553 10 +   9816681 TAATA-T-TTT-A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               77126 10 -     81375 TAATA-T-TTT-T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8943 10 +     19060 TAATA-T-TTT-T
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Pteropus_alecto.KB030862.1                              22978678  2 +  28871421 ----------T-T
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1361683  2 +   4952924 ----------T-T
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Psammomys_obesus.NESX01036370.1                            12722  3 -     21651 TGA----------
i Psammomys_obesus.NESX01036370.1                        C 0 I 41
s Puma_concolor.QAVW01001104.1                            20276178 10 -  38429054 TAATA-T-TGG-T
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             18935 10 -     91421 TAATA-T-TTT-T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7613058 10 +   7812017 TAATA-T-TTT-T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18965 10 -     72585 TAATA-T-TTT-T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  8440 10 +     55207 GAATA-T-TGT-T
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53572971  3 +  90668790 TGA----------
i Rattus_norvegicus.chr16                                C 0 I 41
s Rhinolophus_sinicus.LVEH01000134.1                        368720 10 -   3329780 taata-t-tat-t
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                            10633 10 -     11128 TAATA-T-TTT-T
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91240001 10 - 195417433 taata-t-ttt-t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675648 10 +   7961872 TAATA-T-TTT-T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89749  2 -     96226 ----------T-T
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Semnopithecus_entellus.k141_1672505                         3807 10 -     12572 TAATA-T-TTT-T
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30659 10 +     39453 TAATA-T-TTT-T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           11167 10 +     27826 TAATA-T-TTT-T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10708 10 -     19483 TAATA-T-TTT-T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      4006 10 -     12762 TAATA-T-TTT-T
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3851 10 +     13763 TAATA-T-TTT-T
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     2613  3 -     30804 TTA----------
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 I 43
s Spermophilus_dauricus.KZ294078.1                         1956002 10 -   3870691 taata-ttt-t-a
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              20412 10 -    196729 TAATA-T-TGG-T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6813552 10 +  69701581 AAATA-T-TGT-T
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                13080 10 +     41958 TAACA-T-TGT-C
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      119844 10 -    156842 gaaag-t-tgt-t
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 1465
s Tapirus_terrestris.TapTer_scaffold_755                    388314 10 +    539355 gaaag-a-tgt-t
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 1474
s Tarsius_lariang.k141_2201908                               27607 11 +     70052 TAATATT-TTT-A
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                2404 11 -     16117 TAATATT-TTT-A
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186432331 10 + 186847797 taata-t-ttt-t
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              107424 11 +    114563 TAGGA-TTCTC-A
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Trachypithecus_auratus.k141_722599                         14745 10 -     20410 TAATA-T-TTT-T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3868 10 -     12674 TAATA-T-TTT-T
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14853 10 +     19930 TAATA-T-TTT-T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      11255 10 -     19997 TAATA-T-TTT-T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            51396 10 -     60166 TAATA-T-TTT-T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18859 10 -     27529 TAATA-T-TTT-T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                        491 10 +      9229 TAATA-T-TTT-T
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          12393 10 -     21137 TAATA-T-TTT-T
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                     493 10 +      9131 TAATA-T-TTT-T
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                          457 10 -      3730 TAATA-T-TTT-T
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28725 10 +     32220 TAATA-T-TTT-T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942822 10 +   6242583 TAATA-T-TTT-T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       12074 10 +     20839 TAATA-T-TTT-T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    2335 10 +     27266 GAATA-T-TAT-T
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tupaia_chinensis.KB320699.1                              2158236 10 +   4065304 caggG-T-TTT-A
i Tupaia_chinensis.KB320699.1                            I 261 C 0
s Tupaia_tana.TupTan_flattened_line_306982                     659 10 -      4186 CAGAG-T-TTT-A
i Tupaia_tana.TupTan_flattened_line_306982               I 261 C 0
s Tursiops_truncatus.MRVK01000835.1                       15740158 10 +  33153633 GAATA-T-TGT-T
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Vicugna_pacos.KN270157.1                                 5373840 10 -   5488506 taata-t-ttt-t
i Vicugna_pacos.KN270157.1                               C 0 I 6
s Vulpes_lagopus.VulLag_flattened_line_30954                 12803 10 -     43706 TAATA-T-TTT-G
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          2994 10 +    224448 TAATA-TTT-T-A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_761354             461 10 -      1267 GAATA-T-TGT-T
i Ziphius_cavirostris.ZipCav_flattened_line_761354       C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      16601  0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Uropsilus_gracilis.UroGra_scaffold_12083                   54925 394 -     77625 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tonatia_saurophila.TonSau_scaffold_294                     83098  2 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_85600                    4490  2 +     18632 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Sorex_araneus.JH798187.1                                13652641 429 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    154809 432 -    313613 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Pteronotus_parnellii.KE909381.1                            16825  2 -     21811 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                        67149665 1414 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Octodon_degus.JH651603.1                                  749216 44 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Noctilio_leporinus.NocLep_scaffold_251                    759530  2 +    783361 I
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 143344  2 -    366855 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Micronycteris_hirsuta.MicHir_scaffold_52381                17753  2 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Manis_pentadactyla.KN006162.1                              52445  9 -    317179 I
e Manis_javanica.JSZB01003497.1                              20301  9 +    737560 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     8427 743 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Jaculus_jaculus.JH725527.1                               8278673 121 -   9596543 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Desmodus_rotundus.KZ672289.1                             8632007  2 +  20541912 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            69437  2 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Crocidura_indochinensis.CroInd_scaffold_239572              3398  0 -      5012 I
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Condylura_cristata.JH655891.1                           17549953 974 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            6415  2 -      8501 I
e Carollia_perspicillata.CarPer_scaffold_92756                7006  2 -     11696 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6662  2 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Anoura_caudifer.AnoCau_scaffold_1412                      187255  2 +    412891 I
e Allactaga_bullata.AllBul_scaffold_9566                     75924 121 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T

a score=0.000000
s hg38.chrUn_KI270753v1                                      10600 6 +     62944 ATAGAT
s Acinonyx_jubatus.LLWD01001279.1                           829174 5 -   1699592 G-Atac
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   18461 6 -     52922 ATACAT
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         18398 6 -     28001 ATACAT
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8893 6 -     18505 ATACAT
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9746 6 -     12518 ATACAT
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             10202 6 +     51355 ATACAT
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                3309 6 -     36483 ATACAT
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13762 6 +     28687 ATACAT
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 2234 6 +     27940 ATACAT
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            3313 6 -      9457 ATACAT
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             2271 6 +     30492 ATACAT
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              6266 6 +     47717 ATACAT
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              3002 6 +      5663 ATACAT
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             17453 6 +     50774 ATACAT
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          677941 5 -   2318259 c-atac
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 1391
s Antilocapra_americana.AntAmePen_scaffold_43303               382 5 -     32520 C-ATAC
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      14531 6 +     20879 GTACAT
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21210466 6 -  21539123 ATACAT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               45262 6 -     48001 ATACAT
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 28066 6 -     30947 ATACAT
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9838 6 -     89868 ATACAT
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              14222 6 -     40414 ATACAT
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                22111 6 +     72325 ATACAT
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193790 5 +  23207421 C-ATAc
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         4255 5 -     18090 C-ATAC
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    29024 5 +     34529 C-ATCC
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 1404
s Bison_bison.KN261452.1                                    203031 5 -    288883 C-ATAc
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20276271 5 +  48749331 C-ATAc
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1128824 5 -   1948126 C-ATAc
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18086909 5 +  45695690 C-ATAc
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2822869 5 +   4408762 C-atac
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                103087 6 -    122966 ATACAT
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   62590 6 +     81800 ATACAT
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31772 6 -     95584 ATACAT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55873 6 -    119600 ATACAT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s CanFam4.chr16                                           17801195 5 -  60362399 A-ATAT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     1938 5 -     43241 A-ATAT
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9036638 5 -   9314153 a-atat
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17961109 5 -  59632846 a-atat
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18502411 5 +  63665305 a-atat
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18832046 5 +  46296322 c-atac
i Capra_aegagrus.CM003241.1                              C 0 I 1294
s Capra_hircus.CM004588.1                                 18062766 5 -  44709034 C-atac
i Capra_hircus.CM004588.1                                C 0 I 1391
s Capromys_pilorides.CapPil_scaffold_65020                    3122 6 -     12242 CTATAT
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           157122 6 -    496798 atacac
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    139087 6 +    179628 ATACAC
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     95975 5 +    217609 C-ATAT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18351675 6 -  23392119 CTACAt
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18363935 6 -  23407841 CTACAT
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                       102817 6 +    143979 CTACAT
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         6621 6 +     31688 ATACAC
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12233999 5 +  27778364 a-aagt
i Ceratotherium_simum.JH767749.1                         I 1451 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5022 5 -     25243 a-aagt
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 1447 C 0
s Cercocebus_atys.KQ010504.1                               4479420 6 +   4669795 atatgt
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3914 6 +     17872 ATATGT
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4509 6 -     14043 ATATGT
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12604 6 +     27781 ATATGT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12758 6 -     20310 ATACAT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15734 6 +     29689 ATACAT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10494 6 -     20078 ATACAT
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          18409 6 -     27936 ATACAT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            7280 6 -     17152 ATACAT
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38827004 6 +  39242232 ATACAT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226512 6 -  21565898 ATACAT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43631 6 -     53127 ATACAT
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3881 6 +     13442 ATACAT
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       18427 6 -     27947 ATACAT
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1456 6 +     10558 ATACAT
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4461 6 +     14005 ATACAT
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1691 6 -     17098 ACACAT
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1567 6 +     17877 ACACAT
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            159134 6 -    216457 ACACAT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63609 6 +     76511 ACACAT
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254771 6 +   2543920 ctacat
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_israelita.k141_747660                          100216 6 +    146308 ATACAT
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          32023 6 -     50570 ATACAT
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18432331 6 -  18827391 ATACAT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18828 6 -     50209 ATACAT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425832 6 + 135778131 atacat
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1914333 6 +   2368649 atatat
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952581 6 + 200372422 ATATAT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40854 6 +     84244 ATATAT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           2218 5 +     23735 A-ATAC
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             30355 5 -     87169 G-ATAC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  38047 6 +     51376 CTATGG
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900             1753 6 -     75252 CCATGT
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16813674 5 +  35494412 C-ATAc
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  675846 5 +   1390856 a-aagt
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 1450 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    8599 5 +    198055 a-aagt
i Diceros_bicornis.DicBicMic_scaffold_5955               I 1451 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    38261 6 +     67921 CTACGT
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 35391 6 -     42551 CTACAT
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.AWHC01278734.1                                430 5 +      2334 A-ATAC
i Eidolon_helvum.AWHC01278734.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       313813 5 +    607251 C-atac
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2148938 5 -  14770903 A-ACAC
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1286130 5 +   4378816 a-aatt
i Equus_asinus.JREZ01000139.1                            I 1466 C 0
s Equus_caballus.CM000403.2                               18533939 5 -  39960074 a-aatt
i Equus_caballus.CM000403.2                              I 1468 C 0
s Equus_przewalskii.KK951119.1                               35968 5 +    498745 a-aatt
i Equus_przewalskii.KK951119.1                           I 1468 C 0
s Erythrocebus_patas.Contig38                             21209004 6 -  21539334 ATACAT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           13103 5 +    133382 C-ATAC
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             27049 5 -     44125 C-ATAC
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20238918 5 + 206538554 G-ATac
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20197793 5 + 205367284 G-ATac
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 11453 5 -     36744 G-ATAC
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             852391 6 +   3816255 ttacat
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               4217 6 -      9135 ATGCGT
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     611047 5 -    660261 C-ACAc
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            33186 6 +     49224 ATACAT
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              19845 6 -     32273 ATATAT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341981 6 + 186649187 atacat
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   35202 6 +     78134 ATACCT
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               244162 5 +    327341 G-ATAC
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 20258 5 +     36099 C-ATAC
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 I 1390
s Heterocephalus_glaber.JH602082.1                        20664032 6 +  22651954 ctatat
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       112278 5 +   1711038 a-aaac
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188                843 5 +      9903 A-AAAC
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 C 0
s Hoolock_leuconedys.ctg274                                    438640 6 +    630532 ATACAT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46902 5 +     55795 G-ATAC
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23726 1 -    143317 C-----
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      84960 6 +    135385 ATACAT
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7522855 6 -   7955117 atacat
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                 880 5 -     31341 C-ATAC
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                  625 5 -     18011 C-ATAC
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         16270 6 -     38430 ATACAT
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    18646 5 -     42476 A-ACAC
i Lasiurus_borealis.LasBor_scaffold_32767                I 10 C 0
s Lipotes_vexillifer.KE559953.1                             269935 5 -    662738 C-ATAC
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1440962 6 +   1826925 ATATGT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17957349 5 -  59628241 a-atat
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                              10772 6 +     40492 ATATGT
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59680026 6 +  60120075 ATACGT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16543 6 -     26193 ATATGT
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            84319 6 -    114318 ATATGT
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 10010 6 -     23192 ATATGT
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19474 6 -     29190 ATATGT
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  28052 6 +     37952 ATATGT
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186843129 6 + 187317192 atatgt
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461707 6 -  25927173 atatgt
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83908 6 +     89720 ATATGT
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10901 6 +     20474 ATATGT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10698 6 -     14993 ATATGT
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333560 6 -    668171 ATATGT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 9010 6 -     24072 ATATGT
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29641 6 -     45290 ATATGT
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92594 5 +     94391 A-ATAC
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23941229 6 -  24302211 ATATGT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355345 6 +    752769 ATATGT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33105145 6 -  40650429 atacat
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        15160 5 -    207569 A-ATAC
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    5316 5 +     10310 C-ATAC
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1852142 5 +   8254450 A-Atac
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             35826 5 +     64694 A-ATAC
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                          12909 6 -     28506 ATACAT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    29059 5 -    437263 C-ATAC
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   3094 5 +     82753 C-ATAC
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           8898 5 +     14753 A-ACAC
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              6679 6 +     14296 AGACAT
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     73307 6 -     80779 CTATGC
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                282643 5 -  10118263 A-ACac
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1589959 5 -   6019432 A-ACAC
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3906075 5 -   4330536 A-ACAC
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_44643                          374 5 +     25416 A-ACAC
i Myotis_myotis.MyoMyo_scaffold_44643                    C 0 C 0
s Nannospalax_galili.KL204518.1                            3930828 6 -   9623020 acacat
i Nannospalax_galili.KL204518.1                          n 1291 I 41
s Nasalis_larvatus.k141_413338                               18959 6 +     21681 ATACAT
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5868022 5 +   7148211 C-ATAC
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9151285 5 -   9404916 a-atat
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Ochotona_princeps.JH802162.1                             1366143 6 +   3988456 GTACAC
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         146615 5 +    630418 C-atac
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          78951 5 -    150152 C-ATAc
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  2783915 5 -  10937097 C-ATAC
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       464373 5 -    559221 a-atat
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17588225 5 +  44047080 C-ATac
i Ovis_aries.CM001607.2                                  C 0 I 1174
s Ovis_canadensis.OviCan_scaffold_2572                      176215 5 -    191736 C-ATAC
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 I 1386
s Pan_paniscus.KQ411613.1                                    47946 6 +     80009 atagat
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146805 6 + 189151597 atagat
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152988 5 +    230217 G-ATAC
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                266299 5 +  18783137 G-ATAC
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4723125 5 -   8748460 G-ATAC
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1267122 5 -   2937107 c-atac
i Pantholops_hodgsonii.KE114653.1                        C 0 I 1211
s Papio_anubis.CM001495.2                                183447035 6 + 183742232 atatgt
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10685 6 +     20448 ATATGT
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567493 6 +  20919399 ATATGT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   9425 6 +     41871 ATATGT
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12718 6 +     27711 ATATGT
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3717 6 -     11374 ATATGT
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14439 5 -     78924 G-ATAT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Petromus_typicus.PetTyp_scaffold_221660                      761 6 -      2102 CTACAT
i Petromus_typicus.PetTyp_scaffold_221660                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              10984 5 +     63832 C-ATAC
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            2036 6 +     68526 ATATAT
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        42182 6 +     89929 ATATAT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43596 6 +     51399 ATATAT
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299833 6 -  14605196 atatat
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3708 5 +     22620 A-ACAC
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pithecia_albicans.k141_1476471                              5483 6 +     26961 ACACGT
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1628 6 +     23417 ACACGT
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                5475 6 +     29694 ACACGT
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          30501 6 +     52772 ACACGT
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           5497 6 +     26198 ACACGT
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3942045 6 +   4542175 ACACGT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            5461 6 -     23490 ACACGT
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610            286 5 +      7680 C-ATAC
i Platanista_gangetica.PlaMin_flattened_line_173610      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9712 6 -     39866 ACACAT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18878 6 +     34906 ACACAT
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       23140 6 +     87950 ACACAT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23969 6 +     88961 ACACAT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9640 6 +     39403 ACACAT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          23421 6 -     87928 ACACAT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         30380 6 +     60166 ACACAT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30577 6 +     67232 ACACAT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          26050 6 +     90634 ACACAT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          23422 6 -     89403 ACACAT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189134953 6 + 189387572 atacat
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9574563 6 +   9816681 ATACAT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               77136 6 -     81375 ATACAT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8953 6 +     19060 ATACAT
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Pteropus_alecto.KB030862.1                              22978680 5 +  28871421 A-ATAC
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1361685 5 +   4952924 A-ATAC
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20276188 5 -  38429054 G-ATac
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             18945 6 -     91421 ATACAT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7613068 6 +   7812017 ATACAT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18975 6 -     72585 ATACAT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  8450 5 +     55207 C-ATAC
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        368730 5 -   3329780 a-atac
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                            10643 6 -     11128 ATACAT
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91240011 6 - 195417433 atacat
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675658 6 +   7961872 ATACAT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89751 5 -     96226 A-ATAC
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Semnopithecus_entellus.k141_1672505                         3817 6 -     12572 ATACAT
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30669 6 +     39453 ATACAT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           11177 6 +     27826 ATACAT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10718 6 -     19483 ATACAT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      4016 6 -     12762 ATACAT
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3861 6 +     13763 ATACAT
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1956012 6 -   3870691 atacat
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              20422 5 -    196729 G-ATAC
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6813562 5 +  69701581 T-ACat
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                13090 5 +     41958 A-ACAC
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      121319 5 -    156842 a-aagt
i Tapirus_indicus.TapInd_scaffold_9301                   I 1465 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    389798 5 +    539355 a-aagt
i Tapirus_terrestris.TapTer_scaffold_755                 I 1474 C 0
s Tarsius_lariang.k141_2201908                               27618 6 +     70052 ATACAT
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                2415 6 -     16117 ATACAT
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186432341 6 + 186847797 atatgt
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              107435 6 +    114563 CTACAT
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Trachypithecus_auratus.k141_722599                         14755 6 -     20410 ATACAT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3878 6 -     12674 ATACAT
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14863 6 +     19930 ATACAT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      11265 6 -     19997 ATACAT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            51406 6 -     60166 ATACAT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18869 6 -     27529 ATACAT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                        501 6 +      9229 ATACAT
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          12403 6 -     21137 ATACAT
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                     503 6 +      9131 ATACAT
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                          467 6 -      3730 ATACAT
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28735 6 +     32220 ATACAT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942832 6 +   6242583 ATACAT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       12084 6 +     20839 ATACAT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    2345 5 +     27266 C-ATAC
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tupaia_chinensis.KB320699.1                              2158246 6 +   4065304 ATACAT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_306982                     669 6 -      4186 ATGCAT
i Tupaia_tana.TupTan_flattened_line_306982               C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15740168 5 +  33153633 C-ATAC
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 12813 5 -     43706 A-ATAT
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          3004 6 +    224448 ATACAT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_761354             471 5 -      1267 C-ATAC
i Ziphius_cavirostris.ZipCav_flattened_line_761354       C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202 0 +      8798 C
e Galago_senegalensis.k141_631886                             7400 0 +     11339 C
e Galago_moholi.ctg2040                                     429710 0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964 2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Mus_pahari.LT608297.1                                   31357687 41 -  89631738 I
e Mus_spretus.CM004101.1                                  90755464 41 - 130317789 I
e Mus_musculus.chr8                                       87652975 41 - 129401213 I
e Mus_caroli.LT608237.1                                   84363475 41 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445 0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734 0 -     33856 C
e Perodicticus_potto.k141_1186926                              597 0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219 0 -      3244 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      16601 0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vicugna_pacos.KN270157.1                                 5373850 6 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Uropsilus_gracilis.UroGra_scaffold_12083                   54925 394 -     77625 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tonatia_saurophila.TonSau_scaffold_294                     83098 2 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_85600                    4490 2 +     18632 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Sorex_araneus.JH798187.1                                13652641 429 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_42075                     2616 43 -     30804 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    154809 432 -    313613 I
e Rattus_norvegicus.chr16                                 53572974 41 +  90668790 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Pteronotus_parnellii.KE909381.1                            16825 2 -     21811 I
e Psammomys_obesus.NESX01036370.1                            12725 41 -     21651 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Peromyscus_maniculatus.KI615324.1                       18197599 42 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                        67149665 1414 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Onychomys_torridus.OnyTor_scaffold_2986                    82841 74 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   27474 42 +     28053 I
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Octodon_degus.JH651603.1                                  749216 44 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869 0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414 0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947 0 - 196305487 C
e Noctilio_leporinus.NocLep_scaffold_251                    759530 2 +    783361 I
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Mungos_mungo.MunMun_flattened_line_23663                   36398 7 +     37127 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 143344 2 -    366855 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Microtus_ochrogaster.CM001695.1                         11262806 42 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                17753 2 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184541 44 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 35084 40 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Manis_pentadactyla.KN006162.1                              52445 9 -    317179 I
e Manis_javanica.JSZB01003497.1                              20301 9 +    737560 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     8427 743 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Jaculus_jaculus.JH725527.1                               8278673 121 -   9596543 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577 3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689 0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Ellobius_talpinus.LOJH01081419.1                            2753 42 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          22833 42 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Desmodus_rotundus.KZ672289.1                             8632007 2 +  20541912 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            69437 2 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Crocidura_indochinensis.CroInd_scaffold_239572              3398 0 -      5012 I
e Cricetulus_griseus.LT883664.1                           11668671 0 + 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_18520                 52324 35 +     63868 I
e Condylura_cristata.JH655891.1                           17549953 974 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            6415 2 -      8501 I
e Carollia_perspicillata.CarPer_scaffold_92756                7006 2 -     11696 I
e Camelus_ferus.KB017975.1                                  405099 6 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2336801 6 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10004329 6 -  17673402 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6662 2 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         538 0 +      5281 C
e Anoura_caudifer.AnoCau_scaffold_1412                      187255 2 +    412891 I
e Allactaga_bullata.AllBul_scaffold_9566                     75924 121 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T
e Acomys_cahirinus.AcoCah_scaffold_12655                     73069 65 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      10606 10 +     62944 AAGATTTATG
s Acinonyx_jubatus.LLWD01001279.1                           829179  5 -   1699592 ataag-----
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 12
s Allenopithecus_nigroviridis.k141_3361533                   18467 10 -     52922 AAGATTTATT
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         18404 10 -     28001 AAGATTTATT
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8899 10 -     18505 AAGATTTATT
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9752 10 -     12518 AAGATTTATT
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             10208 10 +     51355 AAGATTTATG
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                3315 10 -     36483 AAGATTTATG
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13768 10 +     28687 AAGATTTATG
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 2240 10 +     27940 AAGATTTATG
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            3319 10 -      9457 AAGATTTATG
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             2277 10 +     30492 AAGATTTATG
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              6272 10 +     47717 AAGATTTATG
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              3008 10 +      5663 AAGATTTATG
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             17459 10 +     50774 AAGATTTATG
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          679337  5 -   2318259 atcag-----
i Ammotragus_lervia.NIVO01071767.1                       I 1391 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303               387  5 -     32520 ATAAG-----
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      14537  5 +     20879 GAAAT-----
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 14
s Ateles_geoffroyi_b.tarseq_1536                             21210472 10 -  21539123 AAGATTTATG
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               45268 10 -     48001 AAGATTTATG
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 28072 10 -     30947 AAGATTTATG
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9844 10 -     89868 AAGATTTATG
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              14228 10 -     40414 AAGATTTATG
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                22117 10 +     72325 AAGATTTATG
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193795  5 +  23207421 ataag-----
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         4260  5 -     18090 ataag-----
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    30433  5 +     34529 ATAAG-----
i Beatragus_hunteri.BeaHun_scaffold_50177                I 1404 C 0
s Bison_bison.KN261452.1                                    203036  5 -    288883 ataag-----
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20276276  5 +  48749331 ataag-----
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1128829  5 -   1948126 ataag-----
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18086914  5 +  45695690 ataag-----
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2822874  5 +   4408762 ataac-----
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                103093 10 -    122966 AAGATTTATT
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   62596 10 +     81800 AAGATTTATT
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31778 10 -     95584 AAGATTTATT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55879 10 -    119600 AAGATTTATT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s CanFam4.chr16                                           17801200  5 -  60362399 ATAAG-----
i CanFam4.chr16                                          C 0 I 12
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     1943  5 -     43241 ATAAG-----
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 I 12
s Canis_lupus_dingo.QKWQ01000480.1                         9036643  5 -   9314153 ataag-----
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 12
s Canis_lupus_familiaris.chr16                            17961114  5 -  59632846 ataag-----
i Canis_lupus_familiaris.chr16                           C 0 I 12
s Canis_lupus_orion.HG994398.1                            18502416  5 +  63665305 ataag-----
i Canis_lupus_orion.HG994398.1                           C 0 I 12
s Capra_aegagrus.CM003241.1                               18833345  5 +  46296322 atcag-----
i Capra_aegagrus.CM003241.1                              I 1294 C 0
s Capra_hircus.CM004588.1                                 18064162  5 -  44709034 atcag-----
i Capra_hircus.CM004588.1                                I 1391 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    3128  5 -     12242 AAGAT-----
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 16
s Carlito_syrichta.NW_007259797.1                           157128  5 -    496798 aAGAT-----
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    139093  5 +    179628 AAGAT-----
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     95980  5 +    217609 AGAAG-----
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18351681  5 -  23392119 aagat-----
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18363941  5 -  23407841 aagat-----
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                       102823  5 +    143979 AAGAT-----
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         6627  5 +     31688 AAGAT-----
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12234004  5 +  27778364 acaGT-----
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5027  5 -     25243 acagt-----
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4479426 10 +   4669795 aagatttatt
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3920 10 +     17872 AAGATTTATT
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4515 10 -     14043 AAGATTTATT
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12610 10 +     27781 AAGATTTATT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12764 10 -     20310 AAGATTTATT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15740 10 +     29689 AAGATTTATT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10500 10 -     20078 AAGATTTATT
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          18415 10 -     27936 AAGATTTATT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            7286 10 -     17152 AAGATTTATT
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38827010 10 +  39242232 AAGATTTATT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226518 10 -  21565898 AAGATTTATT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43637 10 -     53127 AAGATTTATT
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3887 10 +     13442 AAGATTTATT
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       18433 10 -     27947 AAGATTTATT
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1462 10 +     10558 AAGATTTATT
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4467 10 +     14005 AAGATTTATT
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1697 10 -     17098 GAGATTTATT
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1573 10 +     17877 GAGATTTATT
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            159140 10 -    216457 GAGATTTATT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63615 10 +     76511 GAGATTTATT
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254777  5 +   2543920 aagat-----
i Chinchilla_lanigera.JH722012.1                         C 0 I 16
s Chiropotes_israelita.k141_747660                          100222 10 +    146308 AAGATTTATT
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          32029 10 -     50570 AAGATTTATT
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18432337 10 -  18827391 AAAATTTATT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18834 10 -     50209 AAAATTTATT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425838 10 + 135778131 aagatttatt
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1914339 10 +   2368649 aagatttatt
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952587 10 + 200372422 AAGATTTATT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40860 10 +     84244 AAGATTTATT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           2223  5 +     23735 ATAAG-----
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             30360  5 -     87169 ATAAG-----
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 10
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  38053  5 +     51376 AAGAT-----
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 16
s Dasyprocta_punctata.DasPun_flattened_line_15900             1759  5 -     75252 AAGAT-----
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 16
s Delphinapterus_leucas.KZ290073.1                        16813679  5 +  35494412 ataag-----
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  675851  5 +   1390856 acaGT-----
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    8604  5 +    198055 acagt-----
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    38267  5 +     67921 AAGGT-----
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 16
s Dolichotis_patagonum.DolPat_scaffold_30833                 35397  5 -     42551 AAGAT-----
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 I 18
s Eidolon_helvum.AWHC01278734.1                                435  5 +      2334 ATAAG-----
i Eidolon_helvum.AWHC01278734.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       313818  5 +    607251 ataaa-----
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2148943  5 -  14770903 ATCAG-----
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1286135  5 +   4378816 atagt-----
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18533944  5 -  39960074 atagt-----
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               35973  5 +    498745 atagt-----
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21209010 10 -  21539334 AAGATTCATT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           13108  5 +    133382 ATAAG-----
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             27054  5 -     44125 ATAAG-----
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20238923  5 + 206538554 ataag-----
i Felis_catus.CM001381.2                                 C 0 I 12
s Felis_catus_fca126.CM031415.1                           20197798  5 + 205367284 ataag-----
i Felis_catus_fca126.CM031415.1                          C 0 I 12
s Felis_nigripes.FelNig_flattened_line_20823                 11458  5 -     36744 ATAAG-----
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 12
s Fukomys_damarensis.KN121974.1                             852397  5 +   3816255 aagat-----
i Fukomys_damarensis.KN121974.1                          C 0 I 16
s Galeopterus_variegatus.GalVar_scaffold_108840               4223  5 -      9135 AAGAT-----
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     611052  5 -    660261 gtaag-----
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            33192  5 +     49224 AAATT-----
i Glis_glis.GliGli_scaffold_19807                        C 0 I 18
s Gorilla_beringei.k141_3596273                              19851 10 -     32273 AAGATTTATT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341987 10 + 186649187 aagatttatt
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   35208  5 +     78134 AAAAT-----
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 18
s Helogale_parvula.HelPar_flattened_line_2585               244167  5 +    327341 GTAAG-----
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 10
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 21653  5 +     36099 ATAAG-----
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 1390 C 0
s Heterocephalus_glaber.JH602082.1                        20664038  5 +  22651954 aagat-----
i Heterocephalus_glaber.JH602082.1                       C 0 I 16
s Hipposideros_armiger.JXIK01000431.1                       112283  5 +   1711038 ataag-----
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188                848  5 +      9903 ATAAG-----
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 C 0
s Hoolock_leuconedys.ctg274                                    438646 10 +    630532 AAGATTTATT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46907  5 +     55795 ATAAG-----
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 10
s Hystrix_cristata.HysCri_scaffold_5660                      84966  5 +    135385 AACAT-----
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 15
s Ictidomys_tridecemlineatus.JH393364.1                    7522861  5 -   7955117 aaaat-----
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                 885  5 -     31341 CTAAG-----
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                  630  5 -     18011 ATAAG-----
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         16276 10 -     38430 AAGATTTATG
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    18651  5 -     42476 ATGGG-----
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             269940  5 -    662738 ataag-----
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1440968 10 +   1826925 AAGATTTATT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17957354  5 -  59628241 ataag-----
i Lycaon_pictus.CM007581.1                               C 0 I 12
s Macaca_arctoides.k141_2326796                              10778 10 +     40492 AAGATTTATT
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59680032 10 +  60120075 AAGATTTATT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16549 10 -     26193 AAGATTTATT
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            84325 10 -    114318 AAGATTTATT
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 10016 10 -     23192 AAGATTTATT
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19480 10 -     29190 AAGATTTATT
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  28058 10 +     37952 AAGATTTATT
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186843135 10 + 187317192 aagatttatt
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461713 10 -  25927173 aagatttatt
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83914 10 +     89720 AAGATTTATT
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10907 10 +     20474 AAGATTTATT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10704 10 -     14993 AAGATTTATT
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333566 10 -    668171 AAGATTTATT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 9016 10 -     24072 AAGATTTATT
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29647 10 -     45290 AAGATTTATT
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92599  5 +     94391 ATAAG-----
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23941235 10 -  24302211 AAGATTTATT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355351 10 +    752769 AAGATTTATT
i Mandrillus_sphinx.Contig270                            C 0 I 4
s Marmota_marmota.CZRN01000018.1                          33105151  5 -  40650429 aaaat-----
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        15165  5 -    207569 ATAAG-----
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    5321  5 +     10310 ATAAG-----
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1852147  5 +   8254450 ataag-----
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             35831  5 +     64694 ATAAG-----
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                          12915 10 -     28506 AAGATTTATT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    29064  5 -    437263 ATAAG-----
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   3099  5 +     82753 ATAAG-----
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           8903  5 +     14753 ATCAG-----
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              6685  5 +     14296 AATAT-----
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 18
s Myocastor_coypus.MyoCoy_scaffold_10123                     73313  5 -     80779 AAGAT-----
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 I 16
s Myotis_brandtii.KE162005.1                                282648  5 -  10118263 atcag-----
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1589964  5 -   6019432 ATCgg-----
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3906080  5 -   4330536 ATCAG-----
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_44643                          379  5 +     25416 ATCAG-----
i Myotis_myotis.MyoMyo_scaffold_44643                    C 0 C 0
s Nannospalax_galili.KL204047.1                            2038564  5 -   3037898 aattt-----
i Nannospalax_galili.KL204047.1                          I 1291 I 22
s Nasalis_larvatus.k141_413338                               18965 10 +     21681 AAGATTTATT
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5868027  5 +   7148211 ataag-----
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9151290  5 -   9404916 ataag-----
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 13
s Ochotona_princeps.JH802162.1                             1366149  2 +   3988456 AG--------
i Ochotona_princeps.JH802162.1                           C 0 I 678
s Odocoileus_virginianus.KZ100018.1                         146620  5 +    630418 ataaa-----
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          78956  5 -    150152 ataag-----
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  2783920  5 -  10937097 ataag-----
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       464378  5 -    559221 ataag-----
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 346
s Ovis_aries.CM001607.2                                   17589404  5 +  44047080 ataag-----
i Ovis_aries.CM001607.2                                  I 1174 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      177606  5 -    191736 ATAAG-----
i Ovis_canadensis.OviCan_scaffold_2572                   I 1386 C 0
s Pan_paniscus.KQ411613.1                                    47952 10 +     80009 aagatttatt
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146811 10 + 189151597 aagatttatt
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  152993  5 +    230217 ATAAG-----
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 12
s Panthera_pardus.KV860321.1                                266304  5 +  18783137 ATAAG-----
i Panthera_pardus.KV860321.1                             C 0 I 12
s Panthera_tigris.KE722367.1                               4723130  5 -   8748460 ATAAG-----
i Panthera_tigris.KE722367.1                             C 0 I 12
s Pantholops_hodgsonii.KE114653.1                          1268338  5 -   2937107 ataag-----
i Pantholops_hodgsonii.KE114653.1                        I 1211 C 0
s Papio_anubis.CM001495.2                                183447041 10 + 183742232 aagatttatt
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10691 10 +     20448 AAGATTTATT
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567499 10 +  20919399 AAGATTTATT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   9431 10 +     41871 AAGATTTATT
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12724 10 +     27711 AAGATTTATT
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3723 10 -     11374 AAGATTTATT
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14444  5 -     78924 GTAAG-----
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 11
s Petromus_typicus.PetTyp_scaffold_221660                      767  4 -      2102 AT-AT-----
i Petromus_typicus.PetTyp_scaffold_221660                C 0 I 16
s Phocoena_phocoena.PhoPho_flattened_line_24159              10989  5 +     63832 ATAAG-----
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            2042 10 +     68526 AAGATTTATT
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        42188 10 +     89929 AAGATTTATT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43602 10 +     51399 AAGATTTATT
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299839 10 -  14605196 aagatttatt
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3713  5 +     22620 ATCAG-----
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pithecia_albicans.k141_1476471                              5489 10 +     26961 AAGATTTATT
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1634 10 +     23417 AAGATTTATT
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                5481 10 +     29694 AAGATTTATT
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          30507 10 +     52772 AAGATTTATT
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           5503 10 +     26198 AAGATTTATT
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3942051 10 +   4542175 AAGATTTATT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            5467 10 -     23490 AAGATTTATT
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610            291  5 +      7680 ATAAG-----
i Platanista_gangetica.PlaMin_flattened_line_173610      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9718 10 -     39866 AAGATTCATT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18884 10 +     34906 AAGATTCATT
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       23146 10 +     87950 AAGATTCATT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23975 10 +     88961 AAGATTCATT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9646 10 +     39403 AAGATTCATT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          23427 10 -     87928 AAGATTCATT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         30386 10 +     60166 AAGATTCATT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30583 10 +     67232 AAGATTCATT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          26056 10 +     90634 AAGATTCATT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          23428 10 -     89403 AAGATTCATT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189134959 10 + 189387572 aagatttatt
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9574569 10 +   9816681 AAGATTTATT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               77142 10 -     81375 AAGATTTATT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8959 10 +     19060 AAGATTTATT
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Pteropus_alecto.KB030862.1                              22978685  5 +  28871421 ATAAG-----
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1361690  5 +   4952924 ATAAG-----
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20276193  5 -  38429054 ataag-----
i Puma_concolor.QAVW01001104.1                           C 0 I 12
s Pygathrix_cinerea.k141_1153803                             18951 10 -     91421 AAGATTTATT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7613074 10 +   7812017 AAGATTTATT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18981 10 -     72585 AAGATTTATT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  8455  5 +     55207 ATAAA-----
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        368735  5 -   3329780 acaag-----
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                            10649 10 -     11128 AAGATTTATT
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91240017 10 - 195417433 aagatttatt
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675664 10 +   7961872 AAGATTTATT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89756  5 -     96226 ATAAG-----
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_133311                        936  5 +      9503 ATAAA-----
i Saiga_tatarica.SaiTat_scaffold_133311                  N 0 C 0
s Semnopithecus_entellus.k141_1672505                         3823 10 -     12572 AAGATTTATT
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30675 10 +     39453 AAGATTTATT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           11183 10 +     27826 AAGATTTATT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10724 10 -     19483 AAGATTTATT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      4022 10 -     12762 AAGATTTATT
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3867 10 +     13763 AAGATTTATT
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1956018  5 -   3870691 aaaat-----
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              20427  5 -    196729 GTAAG-----
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 10
s Sus_scrofa.CM000828.4                                    6813567  5 +  69701581 agaag-----
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                13095  5 +     41958 ATAAG-----
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      121324  5 -    156842 acagt-----
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    389803  5 +    539355 atagt-----
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               27624  5 +     70052 AAGAT-----
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                2421  5 -     16117 AAGAT-----
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186432347 10 + 186847797 aagatttatt
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              107441  5 +    114563 AAAAT-----
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 16
s Trachypithecus_auratus.k141_722599                         14761 10 -     20410 AAGATTTATT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3884 10 -     12674 AAGATTTATT
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14869 10 +     19930 AAGATTTATT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      11271 10 -     19997 AAGATTTATT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            51412 10 -     60166 AAGATTTATT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18875 10 -     27529 AAGATTTATT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                        507 10 +      9229 AAGATTTATT
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          12409 10 -     21137 AAGATTTATT
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                     509 10 +      9131 AAGATTTATT
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                          473 10 -      3730 AAGATTTATT
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28741 10 +     32220 AAGATTTATT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942838 10 +   6242583 AAGATTTATT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       12090 10 +     20839 AAGATTTATT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    2350  5 +     27266 ATAAG-----
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tupaia_chinensis.KB320699.1                              2158252  5 +   4065304 AATAT-----
i Tupaia_chinensis.KB320699.1                            C 0 I 10
s Tupaia_tana.TupTan_flattened_line_306982                     675  5 -      4186 AGTAT-----
i Tupaia_tana.TupTan_flattened_line_306982               C 0 I 7
s Tursiops_truncatus.MRVK01000835.1                       15740173  5 +  33153633 ataag-----
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 12818  5 -     43706 ATAAG-----
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 12
s Xerus_inauris.XerIna_scaffold_2302                          3010  5 +    224448 AAAAA-----
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 19
s Ziphius_cavirostris.ZipCav_flattened_line_761354             476  5 -      1267 ATAAG-----
i Ziphius_cavirostris.ZipCav_flattened_line_761354       C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Mus_pahari.LT608297.1                                   31357687 41 -  89631738 I
e Mus_spretus.CM004101.1                                  90755464 41 - 130317789 I
e Mus_musculus.chr8                                       87652975 41 - 129401213 I
e Mus_caroli.LT608237.1                                   84363475 41 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      16601  0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vicugna_pacos.KN270157.1                                 5373850  6 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Uropsilus_gracilis.UroGra_scaffold_12083                   54925 394 -     77625 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tonatia_saurophila.TonSau_scaffold_294                     83098  2 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_85600                    4490  2 +     18632 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Sorex_araneus.JH798187.1                                13652641 429 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_42075                     2616 43 -     30804 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    154809 432 -    313613 I
e Rattus_norvegicus.chr16                                 53572974 41 +  90668790 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Pteronotus_parnellii.KE909381.1                            16825  2 -     21811 I
e Psammomys_obesus.NESX01036370.1                            12725 41 -     21651 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Peromyscus_maniculatus.KI615324.1                       18197599 42 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                        67149665 1414 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Onychomys_torridus.OnyTor_scaffold_2986                    82841 74 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_46174                   27474 42 +     28053 I
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Octodon_degus.JH651603.1                                  749216 44 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Noctilio_leporinus.NocLep_scaffold_251                    759530  2 +    783361 I
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 143344  2 -    366855 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Microtus_ochrogaster.CM001695.1                         11262806 42 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                17753  2 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184541 44 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 35084 40 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Manis_pentadactyla.KN006162.1                              52445  9 -    317179 I
e Manis_javanica.JSZB01003497.1                              20301  9 +    737560 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     8427 743 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Jaculus_jaculus.JH725527.1                               8278673 121 -   9596543 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23727  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Ellobius_talpinus.LOJH01081419.1                            2753 42 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          22833 42 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Desmodus_rotundus.KZ672289.1                             8632007  2 +  20541912 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            69437  2 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Crocidura_indochinensis.CroInd_scaffold_239572              3398  0 -      5012 I
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_18520                 52324 35 +     63868 I
e Condylura_cristata.JH655891.1                           17549953 974 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            6415  2 -      8501 I
e Carollia_perspicillata.CarPer_scaffold_92756                7006  2 -     11696 I
e Camelus_ferus.KB017975.1                                  405099  6 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2336801  6 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10004329  6 -  17673402 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6662  2 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Anoura_caudifer.AnoCau_scaffold_1412                      187255  2 +    412891 I
e Allactaga_bullata.AllBul_scaffold_9566                     75924 121 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T
e Acomys_cahirinus.AcoCah_scaffold_12655                     73069 65 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      10616 11 +     62944 TTTT----------------A-A----A---A-A---C---T
s Acinonyx_jubatus.LLWD01001279.1                           829196  1 -   1699592 -----------------------------------------t
i Acinonyx_jubatus.LLWD01001279.1                        I 12 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     73134  6 +     87051 ----------------------A----A---G-A---A---A
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 65 C 0
s Allenopithecus_nigroviridis.k141_3361533                   18477 11 -     52922 TTTT----------------A-A----A---A-A---A---T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         18414 11 -     28001 TTTT----------------A-A----A---A-A---A---T
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8909 11 -     18505 TTTT----------------A-A----A---A-A---A---T
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9762 11 -     12518 TTTT----------------A-A----A---A-A---A---T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             10218 11 +     51355 TTTT----------------A-G----A---A-A---C---A
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                3325 11 -     36483 TTTT----------------A-G----A---A-A---C---A
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13778 11 +     28687 TTTT----------------A-G----A---A-A---C---A
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 2250 11 +     27940 TTTT----------------A-G----A---A-A---C---A
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            3329 11 -      9457 TTTT----------------A-G----A---A-A---C---A
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             2287 11 +     30492 TTTT----------------A-G----A---A-A---C---A
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              6282 11 +     47717 TTTT----------------A-G----A---A-A---C---A
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              3018 11 +      5663 TTTT----------------A-G----A---A-A---C---A
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             17469 11 +     50774 TTTT----------------A-G----A---A-A---C---A
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          679342 16 -   2318259 atgttt---t--aaa-----a-a----a---c-a---a----
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303               392 16 -     32520 ATGT----------TTTAAAA-A----A---C-A---C----
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      14556  6 +     20879 ----------------------A----A---T-A---C---T
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 14 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21210482 11 -  21539123 TTTT----------------A-G----A---A-A---C---A
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               45278 11 -     48001 TTTT----------------A-G----A---A-A---C---A
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 28082 11 -     30947 TTTT----------------A-G----A---A-A---C---A
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9854 11 -     89868 TTTT----------------A-G----A---A-A---C---A
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              14238 11 -     40414 TTTT----------------A-G----A---A-A---C---A
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                22127 11 +     72325 TTTT----------------A-G----A---A-A---C---A
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193800 21 +  23207421 ctgttt---t--aaa-aaa-a-a----a--cc-a---c---t
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         4265 21 -     18090 ctgttt---t--aaa-aaa-a-a----a--cc-a---c---t
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    30438 16 +     34529 ATGT----------TTTAAAA-A----A---C-A---A----
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    203041 16 -    288883 atgttt---t--aaa-----a-a----a---c-a---g----
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20276281 16 +  48749331 atgttt---t--aaa-----a-a----a---c-a---g----
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1128834 16 -   1948126 atgttt---t--aaa-----a-a----a---c-a---g----
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18086919 16 +  45695690 atgttt---t--aaa-----a-a----a---c-a---g----
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2822879 17 +   4408762 attttt---t--aaa-a---a-a----a---c-a---a----
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                103103 11 -    122966 TTTT----------------A-G----A---A-A---T---A
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   62606 11 +     81800 TTTT----------------A-G----A---A-A---T---A
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31788 11 -     95584 TTTT----------------A-G----A---A-A---T---A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55889 11 -    119600 TTTT----------------A-G----A---A-A---T---A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10004335  7 -  17673402 --------------------a-a----a---c-a---c---t
i Camelus_bactrianus.KN276810.1                          I 6 C 0
s Camelus_dromedarius.KN272107.1                           2336807  7 -   7040546 --------------------a-a----a---c-a---c---t
i Camelus_dromedarius.KN272107.1                         I 6 C 0
s Camelus_ferus.KB017975.1                                  405105  7 -   1652518 --------------------a-a----a---c-a---c---t
i Camelus_ferus.KB017975.1                               I 6 C 0
s CanFam4.chr16                                           17801217  1 -  60362399 -----------------------------------------T
i CanFam4.chr16                                          I 12 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     1960  1 -     43241 -----------------------------------------T
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 12 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9036660  1 -   9314153 -----------------------------------------t
i Canis_lupus_dingo.QKWQ01000480.1                       I 12 C 0
s Canis_lupus_familiaris.chr16                            17961131  1 -  59632846 -----------------------------------------t
i Canis_lupus_familiaris.chr16                           I 12 C 0
s Canis_lupus_orion.HG994398.1                            18502433  1 +  63665305 -----------------------------------------t
i Canis_lupus_orion.HG994398.1                           I 12 C 0
s Capra_aegagrus.CM003241.1                               18833350 18 +  46296322 atgttt---t--aaa-aa--a-a----a---c-a---a----
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18064167 18 -  44709034 atgttt---t--aaa-aa--a-a----a---c-a---a----
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    3149  9 -     12242 ----------------------AATG-A---C-G---G---T
i Capromys_pilorides.CapPil_scaffold_65020               I 16 C 0
s Carlito_syrichta.NW_007259797.1                           157133 11 -    496798 TTTT----------------T-T----G---a-t---c---t
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    139098  4 +    179628 TTAT--------------------------------------
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 13
s Catagonus_wagneri.CatWag_scaffold_2839                     95985 21 +    217609 ATAT------TAAAAAAAAAA-A----A---A-A---C---T
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18351686  4 -  23392119 ttat--------------------------------------
i Cavia_aperea.AVPZ01000300.1                            C 0 I 18
s Cavia_porcellus.DS562891.1                              18363946  4 -  23407841 ttat--------------------------------------
i Cavia_porcellus.DS562891.1                             C 0 I 18
s Cavia_tschudii.CavTsc_scaffold_8919                       102828  4 +    143979 TTAT--------------------------------------
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 I 18
s Cephalopachus_bancanus.k141_1423433                         6632  5 +     31688 TTTT----------------T---------------------
i Cephalopachus_bancanus.k141_1423433                    C 0 I 6
s Ceratotherium_simum.JH767749.1                          12234009 15 +  27778364 ATAG-TAAAtcca--ta---a---------------------
i Ceratotherium_simum.JH767749.1                         C 0 I 647
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5032 15 -     25243 atagt-aaatcca--ta---a---------------------
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 I 647
s Cercocebus_atys.KQ010504.1                               4479436 11 +   4669795 tttt----------------a-a----a---a-a---a---t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3930 11 +     17872 TTTA----------------A-A----A---A-A---A---T
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4525 11 -     14043 TTTT----------------A-A----A---A-A---A---T
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12620 11 +     27781 TTTT----------------A-A----A---A-A---A---T
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12774 11 -     20310 TTTT----------------A-A----A---A-A---A---T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15750 11 +     29689 TTTT----------------A-A----A---A-A---A---T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10510 11 -     20078 TTTT----------------T-A----A---A-A---A---T
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          18425 11 -     27936 TTTT----------------A-A----A---A-A---A---T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            7296 11 -     17152 TTTT----------------A-A----A---A-A---A---T
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38827020 11 +  39242232 TTTT----------------A-A----A---A-A---A---T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226528 11 -  21565898 TTTA----------------A-A----A---A-A---A---A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43647 11 -     53127 TTTA----------------A-A----A---A-A---A---T
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3897 11 +     13442 TTTT----------------A-A----A---A-A---A---T
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       18443 11 -     27947 TTTA----------------A-A----A---A-A---A---T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1472 11 +     10558 TTTT----------------A-A----A---A-A---A---T
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4477 11 +     14005 TTTT----------------T-A----A---A-A---A---T
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1707 11 -     17098 TTTC----------------A-G----A---A-A---T---A
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1583 11 +     17877 TTTC----------------A-G----A---A-A---T---A
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            159150 11 -    216457 TTTC----------------A-G----A---A-A---T---A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63625 11 +     76511 TTTC----------------A-G----A---A-A---T---A
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254798  9 +   2543920 ----------------------ggca-A---G-A---G---T
i Chinchilla_lanigera.JH722012.1                         I 16 C 0
s Chiropotes_israelita.k141_747660                          100232 11 +    146308 TTTT----------------A-G----A---A-A---T---A
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          32039 11 -     50570 TTTT----------------A-G----A---A-A---T---A
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18432347 11 -  18827391 TTTT----------------T-A----A---A-A---A---T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18844 11 -     50209 TTTT----------------A-A----A---A-A---A---T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425848 11 + 135778131 tttt----------------t-a----a---a-a---a---t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1914349 11 +   2368649 ttta----------------a-a----a---a-a---a---t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952597 11 + 200372422 TTTA----------------A-A----A---A-A---A---T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40870 11 +     84244 TTTT----------------A-A----A---A-A---A---T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           2228 17 +     23735 GTTT----------TTTAAAG-G----A---C-A---C---T
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 52359  6 +     63868 ----------------------A----A---G-A---A---A
i Cricetomys_gambianus.CriGam_scaffold_18520             I 35 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             30375  2 -     87169 -------------------------------C-A--------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 10 I 1
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  38074  9 +     51376 ----------------------AACA-A---C-A---G---T
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 16 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900             1780  9 -     75252 ----------------------AACA-A---C-A---G---T
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 16 C 0
s Delphinapterus_leucas.KZ290073.1                        16813684 21 +  35494412 ctgtttaaa---aaa-aa--a-a----a---c-a---c---t
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    38288  9 +     67921 ----------------------GATA-A---T-A---G---T
i Dinomys_branickii.DinBra_scaffold_21862                I 16 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 35420  7 -     42551 -------------------------------C-AGCCT---T
i Dolichotis_patagonum.DolPat_scaffold_30833             I 18 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  675856 15 +   1390856 ATAG-TAAAtcca--ta---a---------------------
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 642
s Diceros_bicornis.DicBicMic_scaffold_5955                    8609 15 +    198055 atagt-aaatcca--ta---a---------------------
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 649
s Eidolon_helvum.AWHC01278734.1                                440 16 +      2334 ATTT----------TGTAAGA-G----A---C-a---c----
i Eidolon_helvum.AWHC01278734.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       313823 16 +    607251 atgttt---t--aaa-----a-a----a---c-a---a----
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          22875  6 -    110024 ----------------------a----a---g-a---a---a
i Ellobius_lutescens.LOEQ01008920.1                      I 42 C 0
s Ellobius_talpinus.LOJH01081419.1                            2795  6 +      8657 ----------------------a----a---g-a---a---a
i Ellobius_talpinus.LOJH01081419.1                       I 42 C 0
s Eptesicus_fuscus.JH977646.1                              2148948 10 -  14770903 CTTT-----------TTTTAA---------------------
i Eptesicus_fuscus.JH977646.1                            C 0 I 6
s Equus_asinus.JREZ01000139.1                              1286140 15 +   4378816 atagt-aaat--acata---a---------------------
i Equus_asinus.JREZ01000139.1                            C 0 I 651
s Equus_caballus.CM000403.2                               18533949 15 -  39960074 atagt-aaat--acata---a---------------------
i Equus_caballus.CM000403.2                              C 0 I 651
s Equus_przewalskii.KK951119.1                               35978 15 +    498745 atagt-aaat--acata---a---------------------
i Equus_przewalskii.KK951119.1                           C 0 I 651
s Erythrocebus_patas.Contig38                             21209020 10 -  21539334 TTT-----------------A-A----A---A-A---A---T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           13113 20 +    133382 CTGT-------TTTAAAAAAA-A----A---C-A---C---T
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             27059 20 -     44125 CTGT-------TTTAAAAAAT-A----A---C-A---C---T
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20238940  1 + 206538554 -----------------------------------------t
i Felis_catus.CM001381.2                                 I 12 C 0
s Felis_catus_fca126.CM031415.1                           20197815  1 + 205367284 -----------------------------------------t
i Felis_catus_fca126.CM031415.1                          I 12 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 11475  1 -     36744 -----------------------------------------T
i Felis_nigripes.FelNig_flattened_line_20823             I 12 C 0
s Fukomys_damarensis.KN121974.1                             852418  9 +   3816255 ----------------------aaca-a---c-a---c---t
i Fukomys_damarensis.KN121974.1                          I 16 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               4228 24 -      9135 TTAT---TTAAAAAAAAAAAA-A----A---A-A---C---T
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     611057 16 -    660261 atgttt---t--aaa-----a-a----a---c-a---c----
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            33215  9 +     49224 ----------------------A----ACAAC-A---C---T
i Glis_glis.GliGli_scaffold_19807                        I 18 C 0
s Gorilla_beringei.k141_3596273                              19861 11 -     32273 TTTC----------------A-A----A---A-A---C---T
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186341997 11 + 186649187 tttt----------------a-a----a---a-a---c---t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   35231  6 +     78134 ----------------------A----A---C-A---C---T
i Graphiurus_murinus.GraMur_scaffold_10447               I 18 C 0
s Helogale_parvula.HelPar_flattened_line_2585               244182  2 +    327341 -------------------------------C-A--------
i Helogale_parvula.HelPar_flattened_line_2585            I 10 I 1
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 21658 16 +     36099 ATGT----------TTTAAAA-A----A---C-A---A----
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20664059  9 +  22651954 ----------------------aacA-A---C-C---C---T
i Heterocephalus_glaber.JH602082.1                       I 16 C 0
s Hipposideros_armiger.JXIK01000431.1                       112288 16 +   1711038 attttt---t--aaa-----a-g----a---c-a---c----
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188                853 17 +      9903 ATTT----------TTAAAAA-G----A---C-A---C---T
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 C 0
s Hoolock_leuconedys.ctg274                                    438656 11 +    630532 TTTT----------------A-A----A---A-A---C---T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46922  2 +     55795 -------------------------------C-A--------
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 10 I 1
s Hystrix_cristata.HysCri_scaffold_5660                      84986  6 +    135385 ----------------------A----A---C-A---C---A
i Hystrix_cristata.HysCri_scaffold_5660                  I 15 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7522866  4 -   7955117 ttat--------------------------------------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 13
s Inia_geoffrensis.IniGeo_flattened_line_34779                 890 20 -     31341 CTGT-------TTAAAAAAAG-A----A---C-A---C---T
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                  635 21 -     18011 CTGT------TTTAAAAAAAA-A----T---C-A---C---T
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         16286 11 -     38430 TTTT----------------A-G----A---A-A---C---A
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    18656 17 -     42476 CTTT----------GTTTTAA-G----A---C-A---C---T
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             269945 20 -    662738 ctgtttaaa---aaa-a---a-a----a---c-a---c---t
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1440978 11 +   1826925 TTTT----------------A-A----A---A-A---A---T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17957371  1 -  59628241 -----------------------------------------t
i Lycaon_pictus.CM007581.1                               I 12 C 0
s Macaca_arctoides.k141_2326796                              10788 11 +     40492 TTTT----------------T-A----A---A-A---A---T
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59680042 11 +  60120075 TTTT----------------T-A----A---A-A---A---T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16559 11 -     26193 TTTT----------------T-A----A---A-A---A---T
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            84335 11 -    114318 TTTT----------------A-A----A---A-A---A---T
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 10026 11 -     23192 TTTT----------------T-A----A---A-A---A---T
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19490 11 -     29190 TTTT----------------A-A----A---A-A---A---T
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  28068 11 +     37952 TTTT----------------A-A----A---A-A---A---T
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186843145 11 + 187317192 tttt----------------t-a----a---a-a---a---t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461723 11 -  25927173 tttt----------------a-a----a---a-a---a---t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83924 11 +     89720 TTTT----------------A-A----A---A-A---A---T
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10917 11 +     20474 TTTT----------------T-A----A---A-A---A---T
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10714 11 -     14993 TTTT----------------A-A----A---A-A---A---T
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333576 11 -    668171 TTTT----------------A-A----A---A-A---A---T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 9026 11 -     24072 TTTT----------------T-A----A---A-A---A---T
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29657 11 -     45290 TTTT----------------A-A----A---A-A---A---T
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92604 16 +     94391 ATTT----------TGTAAGA-G----A---C-A---C----
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23941245 11 -  24302211 TTTT----------------T-A----A---A-A---A---T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355365  6 +    752769 ----------------------A----A---A-A---A---T
i Mandrillus_sphinx.Contig270                            I 4 C 0
s Manis_javanica.JSZB01003497.1                              20310  7 +    737560 --------------------g-a----a---c-a---c---t
i Manis_javanica.JSZB01003497.1                          I 9 C 0
s Manis_pentadactyla.KN006162.1                              52454  7 -    317179 --------------------g-a----a---c-a---c---t
i Manis_pentadactyla.KN006162.1                          I 9 C 0
s Marmota_marmota.CZRN01000018.1                          33105156  4 -  40650429 ttat--------------------------------------
i Marmota_marmota.CZRN01000018.1                         C 0 I 13
s Megaderma_lyra.MegLyr_scaffold_4542                        15170 17 -    207569 AACT----------TTTAAAA-G----A---C-A---C---T
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 35124  6 +    140813 ----------------------A----A---G-A---A---A
i Meriones_unguiculatus.MerUng_scaffold_7390             I 40 C 0
s Mesocricetus_auratus.KB708134.1                         12184585  6 -  29670104 ----------------------a----a---g-a---a---a
i Mesocricetus_auratus.KB708134.1                        I 44 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    5326 21 +     10310 CTGT------TTAAAAAAAAG-A----A---C-A---C---T
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11262848  9 -  27267610 ----------------------a----a---g-a---aaaaa
i Microtus_ochrogaster.CM001695.1                        I 42 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1852152 17 +   8254450 attttt---t--aaa-----a-g----a---c-a---c---t
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             35836 17 +     64694 ATTT----------TTTAAAA-G----A---C-A---C---T
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                          12925 11 -     28506 TTTT----------------A-A----A---A-A---A---T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    29069 21 -    437263 CTGT------TTAAAAAAAAA-A----A---C-A---C---T
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   3104 16 +     82753 ATGT----------TTCAAAA-A----A---C-A---A----
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           8908 16 +     14753 CTTT-----------TTTTAA-G----A---C-A---C---T
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84363516  5 - 120012414 ---------------------------a---g-a---g---a
i Mus_caroli.LT608237.1                                  I 41 C 0
s Mus_musculus.chr8                                       87653016  5 - 129401213 ---------------------------A---G-A---G---A
i Mus_musculus.chr8                                      I 41 C 0
s Mus_pahari.LT608297.1                                   31357728  5 -  89631738 ---------------------------A---G-A---G---G
i Mus_pahari.LT608297.1                                  I 41 C 0
s Mus_spretus.CM004101.1                                  90755505  5 - 130317789 ---------------------------a---g-a---g---a
i Mus_spretus.CM004101.1                                 I 41 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              6708  6 +     14296 ----------------------A----A---C-A---C---T
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 18 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     73334  9 -     80779 ----------------------AATG-A---C-A---G---T
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 16 C 0
s Myotis_brandtii.KE162005.1                                282653 18 -  10118263 cttttt---tt---tta---a-g----a---t-a---c---t
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1589969 17 -   6019432 cttttt---tt-aa------a-g----a---g-a---c---t
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3906085 16 -   4330536 CTTT-----------TTTTAA-G----A---T-a---c---t
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_44643                          384 17 +     25416 CTTT----------TTTTTAA-G----A---T-A---C---T
i Myotis_myotis.MyoMyo_scaffold_44643                    C 0 C 0
s Nannospalax_galili.KL204047.1                            2038591  6 -   3037898 ----------------------a----a---a-a---a---a
i Nannospalax_galili.KL204047.1                          I 22 I 10
s Nasalis_larvatus.k141_413338                               18975 11 +     21681 TTTT----------------A-A----A---A-A---A---T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5868032 21 +   7148211 ctgtttaaa---aaa-aa--a-a----a---c-a---c---t
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9151308  1 -   9404916 -----------------------------------------t
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 13 C 0
s Ochotona_princeps.JH802162.1                             1366829 26 +   3988456 ttaattaaattgaaataaaat-a----a---c-a---a----
i Ochotona_princeps.JH802162.1                           I 678 I 1
s Octodon_degus.JH651603.1                                  749260  8 +  11899542 ----------------------aatg-a---c-a---g----
i Octodon_degus.JH651603.1                               I 44 I 7
s Odocoileus_virginianus.KZ100018.1                         146625 16 +    630418 atgttt---t--aaa-----a-a----a---c-a---a----
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          78961 16 -    150152 atgttt---t--aaa-----a-a----a---c-a---c----
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_46174                   27516  6 +     28053 ----------------------A----A---G-A---A---A
i Ondatra_zibethicus.OndZib_scaffold_46174               I 42 C 0
s Orcinus_orca.KB316932.1                                  2783925 21 -  10937097 ctgtttaaa---aaa-aa--a-a----a---c-a---c---t
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       464729  1 -    559221 -----------------------------------------t
i Otocyon_megalotis.JAEUCK010005147.1                    I 346 T 334
s Ovis_aries.CM001607.2                                   17589409 16 +  44047080 atgttt---t--aaa-----a-a----a---c-a---a----
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      177611 16 -    191736 ATGT----------TTTAAAA-A----A---C-A---A----
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    47962 11 +     80009 tttt----------------a-a----a---a-a---c---t
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146821 11 + 189151597 tttt----------------a-a----a---a-a---c---t
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  153010  1 +    230217 -----------------------------------------T
i Panthera_onca.PanOnc_flattened_line_3271               I 12 C 0
s Panthera_pardus.KV860321.1                                266321  1 +  18783137 -----------------------------------------T
i Panthera_pardus.KV860321.1                             I 12 C 0
s Panthera_tigris.KE722367.1                               4723147  1 -   8748460 -----------------------------------------T
i Panthera_tigris.KE722367.1                             I 12 C 0
s Pantholops_hodgsonii.KE114653.1                          1268343 16 -   2937107 atgttt---t--aaa-----a-a----a---c-a---a----
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183447051 11 + 183742232 tttt----------------a-a----a---a-a---a---t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10701 11 +     20448 TTTA----------------A-A----A---A-A---A---T
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567509 11 +  20919399 TTTT----------------A-A----A---A-A---A---T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   9441 11 +     41871 TTTT----------------A-A----A---A-A---A---T
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12734 11 +     27711 TTTT----------------A-A----A---A-A---A---T
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3733 11 -     11374 TTTT----------------A-A----A---A-A---A---T
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14460  2 -     78924 -------------------------------C-A--------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 11 I 1
s Peromyscus_maniculatus.KI615324.1                       18197641  7 -  18517816 ----------------------a----a---g-a--aa---a
i Peromyscus_maniculatus.KI615324.1                      I 42 C 0
s Petromus_typicus.PetTyp_scaffold_221660                      787  9 -      2102 ----------------------A-TCAA---T-A---C---T
i Petromus_typicus.PetTyp_scaffold_221660                I 16 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              10994 21 +     63832 CTGT------TTAAAAAAAAA-A----A---C-A---C---T
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            2052 12 +     68526 TTTA----------------AAA----A---A-A---A---T
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        42198 11 +     89929 TTTT----------------A-A----A---A-A---A---T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43612 11 +     51399 TTTT----------------A-A----A---A-A---A---T
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299849 11 -  14605196 tttt----------------a-a----a---a-a---a---t
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3718 20 +     22620 CTTT-------TTTTTTTTAA-G----A---C-A---C---T
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pithecia_albicans.k141_1476471                              5499 11 +     26961 TTTT----------------A-G----A---A-C---T---A
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1644 11 +     23417 TTTT----------------A-G----A---A-C---T---A
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                5491 11 +     29694 TTTT----------------A-G----A---A-C---T---A
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          30517 11 +     52772 TTTT----------------A-G----A---A-C---T---A
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           5513 11 +     26198 TTTT----------------A-G----A---A-C---T---A
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3942061 11 +   4542175 TTTT----------------A-G----A---A-C---T---A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            5477 11 -     23490 TTTT----------------A-G----A---A-C---T---A
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610            296 24 +      7680 CTGT---TTAAAAAAAAAAAA-A----A---C-A---C---T
i Platanista_gangetica.PlaMin_flattened_line_173610      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9728 11 -     39866 TTTT----------------A-G----A---A-A---T---A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18894 11 +     34906 TTTT----------------A-G----A---A-A---T---A
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       23156 11 +     87950 TTTT----------------A-G----A---A-A---T---A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     23985 11 +     88961 TTTT----------------A-G----A---A-A---T---A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9656 11 +     39403 TTTT----------------A-G----A---A-A---T---A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          23437 11 -     87928 TTTT----------------A-G----A---A-A---T---A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         30396 11 +     60166 TTTT----------------A-G----A---A-A---T---A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30593 11 +     67232 TTTT----------------A-G----A---A-A---T---A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          26066 11 +     90634 TTTT----------------A-G----A---A-A---T---A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          23438 11 -     89403 TTTT----------------A-G----A---A-A---T---A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189134969 11 + 189387572 tttt----------------a-a----a---a-a---c---t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9574579 11 +   9816681 TTTT----------------A-A----A---A-A---C---T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               77152 11 -     81375 TTTT----------------A-A----A---A-A---A---T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              8969 11 +     19060 TTTT----------------A-A----A---A-A---A---T
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            12766  6 -     21651 ----------------------a----a---g-a---a---a
i Psammomys_obesus.NESX01036370.1                        I 41 C 0
s Puma_concolor.QAVW01001104.1                            20276210  1 -  38429054 -----------------------------------------t
i Puma_concolor.QAVW01001104.1                           I 12 C 0
s Pteropus_alecto.KB030862.1                              22978690 16 +  28871421 ATTT----------TGTAAGA-G----A---C-a---c----
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1361695 16 +   4952924 ATTT----------TGTAAGA-G----A---C-a---c----
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             18961 12 -     91421 TTTA----------------A-A----A---AAA---A---T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7613084 12 +   7812017 TTTA----------------A-A----A---AAA---A---T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             18991 12 -     72585 TTTA----------------A-A----A---AAA---A---T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  8460 16 +     55207 ATGT----------TTTAAAA-A----A---C-A---A----
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53573015  5 +  90668790 ---------------------------a---g-a---a---a
i Rattus_norvegicus.chr16                                I 41 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        368740 16 -   3329780 atttttaaa-----------a-g----a---c-a---c---t
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                            10659 11 -     11128 TTTA----------------A-A----A---A-A---A---T
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91240027 11 - 195417433 ttta----------------a-a----a---a-a---a---t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675674 11 +   7961872 TTTA----------------A-A----A---A-A---A---T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89761 16 -     96226 ATTT----------TGTAAGA-A----A---C-A---T----
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_133311                        941 17 +      9503 ATGT---------TTTAAAAA-A----A---C-A---A----
i Saiga_tatarica.SaiTat_scaffold_133311                  C 0 C 0
s Semnopithecus_entellus.k141_1672505                         3833 11 -     12572 TTTA----------------A-A----A---A-A---A---T
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30685 11 +     39453 TTTA----------------A-A----A---A-A---A---T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           11193 11 +     27826 TTTA----------------A-A----A---A-A---A---T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10734 11 -     19483 TTTA----------------A-A----A---A-A---A---T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      4032 11 -     12762 TTTT----------------A-A----A---A-A---A---T
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3877 11 +     13763 TTTA----------------A-A----A---A-A---A---T
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     2659  6 -     30804 ----------------------A----A---G-A---A---A
i Sigmodon_hispidus.SigHis_scaffold_42075                I 43 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              20442  2 -    196729 -------------------------------C-A--------
i Suricata_suricatta.SurSur_flattened_line_6629          I 10 I 1
s Spermophilus_dauricus.KZ294078.1                         1956023  4 -   3870691 ttat--------------------------------------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 13
s Sus_scrofa.CM000828.4                                    6813572 21 +  69701581 atatt-aaa---aaa-aaa-a-a----a---c-a---c---t
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                13100 17 +     41958 ATTT----------TTTAAAA-G----A---C-A---C---T
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      121329 15 -    156842 atagt-aaat--acata---a---------------------
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 643
s Tapirus_terrestris.TapTer_scaffold_755                    389808 15 +    539355 acagt-aaat--acata---a---------------------
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 643
s Tarsius_lariang.k141_2201908                               27629 11 +     70052 TTTT----------------T-A----G---A-T---C---T
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                2426 11 -     16117 TTTT----------------T-A----G---A-T---C---T
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186432357 11 + 186847797 tttt----------------t-a----a---a-a---a---t
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              107462  9 +    114563 ----------------------A-TCAA---T-A---C---T
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 16 C 0
s Trachypithecus_auratus.k141_722599                         14771 11 -     20410 TTTT----------------A-A----A---A-A---A---T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3894 11 -     12674 TTTT----------------A-A----A---A-A---A---T
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14879 11 +     19930 TTTT----------------A-A----A---A-A---A---T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      11281 11 -     19997 TTTA----------------A-A----A---A-A---A---T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            51422 11 -     60166 TTTA----------------A-A----A---A-A---A---T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18885 11 -     27529 TTTT----------------A-A----A---A-A---A---T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                        517 11 +      9229 TTTA----------------A-A----A---A-A---A---T
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          12419 11 -     21137 TTTA----------------A-A----A---A-A---A---T
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                     519 11 +      9131 TTTA----------------A-A----A---A-A---A---T
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                          483 11 -      3730 TTTA----------------A-A----A---A-A---A---T
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28751 11 +     32220 TTTA----------------A-A----A---A-A---A---T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942848 11 +   6242583 TTTA----------------A-A----A---A-A---A---T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       12100 11 +     20839 TTTT----------------A-A----A---A-A---A---T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    2355 17 +     27266 ATGT----------TTGCAAA-A----A---C-A---C---T
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tupaia_chinensis.KB320699.1                              2158267  6 +   4065304 ----------------------a----a---t-a---c---t
i Tupaia_chinensis.KB320699.1                            I 10 C 0
s Tupaia_tana.TupTan_flattened_line_306982                     687  6 -      4186 ----------------------A----A---T-A---C---T
i Tupaia_tana.TupTan_flattened_line_306982               I 7 C 0
s Tursiops_truncatus.MRVK01000835.1                       15740178 21 +  33153633 ctgtttaaa---aaa-aa--a-a----a---c-a---c---t
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Vicugna_pacos.KN270157.1                                 5373856  7 -   5488506 --------------------a-a----a---c-a---c---t
i Vicugna_pacos.KN270157.1                               I 6 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 12835  1 -     43706 -----------------------------------------T
i Vulpes_lagopus.VulLag_flattened_line_30954             I 12 C 0
s Xerus_inauris.XerIna_scaffold_2302                          3034  6 +    224448 ----------------------A----A---C-A---C---T
i Xerus_inauris.XerIna_scaffold_2302                     I 19 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_761354             481 21 -      1267 CTGT------TTAAAAAAAAG-A----A---C-A---C---T
i Ziphius_cavirostris.ZipCav_flattened_line_761354       C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      16601  0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Uropsilus_gracilis.UroGra_scaffold_12083                   54925 394 -     77625 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tonatia_saurophila.TonSau_scaffold_294                     83098  2 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_85600                    4490  2 +     18632 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Sorex_araneus.JH798187.1                                13652641 429 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    154809 432 -    313613 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Pteronotus_parnellii.KE909381.1                            16825  2 -     21811 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                        67149665 1414 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Onychomys_torridus.OnyTor_scaffold_2986                    82841 74 +    102263 I
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Noctilio_leporinus.NocLep_scaffold_251                    759530  2 +    783361 I
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 143344  2 -    366855 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Micronycteris_hirsuta.MicHir_scaffold_52381                17753  2 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     8427 743 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Jaculus_jaculus.JH725527.1                               8278673 121 -   9596543 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23727  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Desmodus_rotundus.KZ672289.1                             8632007  2 +  20541912 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            69437  2 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Crocidura_indochinensis.CroInd_scaffold_239572              3398  0 -      5012 I
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Condylura_cristata.JH655891.1                           17549953 974 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            6415  2 -      8501 I
e Carollia_perspicillata.CarPer_scaffold_92756                7006  2 -     11696 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6662  2 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Anoura_caudifer.AnoCau_scaffold_1412                      187255  2 +    412891 I
e Allactaga_bullata.AllBul_scaffold_9566                     75924 121 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T

a score=0.000000
s hg38.chrUn_KI270753v1                                      10627 12 +     62944 T-GAAA--GAAAAGA
s Acinonyx_jubatus.LLWD01001279.1                           829197  6 -   1699592 g-gaga--c------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 7
s Acomys_cahirinus.AcoCah_scaffold_12655                     73140  3 +     87051 ---AA---T------
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 4
s Allenopithecus_nigroviridis.k141_3361533                   18488  7 -     52922 T-GAGA--GA-----
i Allenopithecus_nigroviridis.k141_3361533               C 0 I 6
s Allochrocebus_lhoesti.k141_4309873                         18425  7 -     28001 T-GAGA--GA-----
i Allochrocebus_lhoesti.k141_4309873                     C 0 I 6
s Allochrocebus_preussi.k141_1442296                          8920  7 -     18505 T-GAGA--GA-----
i Allochrocebus_preussi.k141_1442296                     C 0 I 6
s Allochrocebus_solatus.k141_166128                           9773  7 -     12518 T-GAGA--GA-----
i Allochrocebus_solatus.k141_166128                      C 0 I 6
s Alouatta_belzebul.k141_3560514                             10229  7 +     51355 T-GAAA--TA-----
i Alouatta_belzebul.k141_3560514                         C 0 I 6
s Alouatta_caraya.k141_1701091                                3336  7 -     36483 T-GAAA--TA-----
i Alouatta_caraya.k141_1701091                           C 0 I 6
s Alouatta_discolor.k141_566626                              13789  7 +     28687 T-GAAA--TA-----
i Alouatta_discolor.k141_566626                          C 0 I 6
s Alouatta_juara.k141_1302312                                 2261  7 +     27940 T-GAAA--TA-----
i Alouatta_juara.k141_1302312                            C 0 I 6
s Alouatta_macconnelli.k141_918386                            3340  7 -      9457 T-GAAA--TA-----
i Alouatta_macconnelli.k141_918386                       C 0 I 6
s Alouatta_nigerrima.k141_1929159                             2298  7 +     30492 T-GAAA--TA-----
i Alouatta_nigerrima.k141_1929159                        C 0 I 6
s Alouatta_palliata.k141_2135620                              6293  7 +     47717 T-GAAA--TA-----
i Alouatta_palliata.k141_2135620                         C 0 I 6
s Alouatta_puruensis.k141_362188                              3029  7 +      5663 T-GAAA--TA-----
i Alouatta_puruensis.k141_362188                         C 0 I 6
s Alouatta_seniculus.k141_117119                             17480  7 +     50774 T-GAAA--TA-----
i Alouatta_seniculus.k141_117119                         C 0 I 6
s Ammotragus_lervia.NIVO01071767.1                          679358  6 -   2318259 t-gaga--c------
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 7
s Antilocapra_americana.AntAmePen_scaffold_43303               408  7 -     32520 TTGCGA--C------
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 I 7
s Aplodontia_rufa.AprRuf_scaffold_68852                      14562  6 +     20879 C-AAAA--G------
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 3
s Ateles_geoffroyi_b.tarseq_1536                             21210493  7 -  21539123 T-GAAA--TA-----
i Ateles_geoffroyi_b.tarseq_1536                            C 0 I 6
s Ateles_belzebuth.k141_445860                               45289  7 -     48001 T-GAAA--TA-----
i Ateles_belzebuth.k141_445860                           C 0 I 6
s Ateles_chamek.k141_1806455                                 28093  7 -     30947 T-GAAA--TA-----
i Ateles_chamek.k141_1806455                             C 0 I 6
s Ateles_geoffroyi_a.k141_833924                                9865  7 -     89868 T-GAAA--TA-----
i Ateles_geoffroyi_a.k141_833924                           C 0 I 6
s Ateles_marginatus.k141_803263                              14249  7 -     40414 T-GAAA--TA-----
i Ateles_marginatus.k141_803263                          C 0 I 6
s Ateles_paniscus.k141_457735                                22138  7 +     72325 T-GAAA--TA-----
i Ateles_paniscus.k141_457735                            C 0 I 6
s Balaenoptera_acutorostrata.KI537508.1                   15193821  6 +  23207421 t-gaga--c------
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 7
s Balaenoptera_bonaerensis.DF707048.1                         4286  6 -     18090 t-gaga--c------
i Balaenoptera_bonaerensis.DF707048.1                    C 0 I 7
s Beatragus_hunteri.BeaHun_scaffold_50177                    30454  6 +     34529 T-GAGA--C------
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 7
s Bison_bison.KN261452.1                                    203057  6 -    288883 t-gaGA--C------
i Bison_bison.KN261452.1                                 C 0 I 7
s Bos_indicus.CM003047.1                                  20276297  6 +  48749331 t-gagA--C------
i Bos_indicus.CM003047.1                                 C 0 I 7
s Bos_mutus.JH880303.1                                     1128850  6 -   1948126 t-gagA--C------
i Bos_mutus.JH880303.1                                   C 0 I 7
s Bos_taurus.CM000203.6                                   18086935  6 +  45695690 t-gagA--C------
i Bos_taurus.CM000203.6                                  C 0 I 7
s Bubalus_bubalis.KI419123.1                               2822896  6 +   4408762 t-gaga--C------
i Bubalus_bubalis.KI419123.1                             C 0 I 7
s Cacajao_ayresi.k141_552049                                103114  7 -    122966 T-GAAG--TA-----
i Cacajao_ayresi.k141_552049                             C 0 I 6
s Cacajao_calvus.k141_5142                                   62617  7 +     81800 T-GAAG--TA-----
i Cacajao_calvus.k141_5142                               C 0 I 6
s Cacajao_hosomi.k141_81245                                  31799  7 -     95584 T-GAAG--TA-----
i Cacajao_hosomi.k141_81245                              C 0 I 6
s Cacajao_melanocephalus.k141_619699                         55900  7 -    119600 T-GAAG--TA-----
i Cacajao_melanocephalus.k141_619699                     C 0 I 6
s Camelus_bactrianus.KN276810.1                           10004342  6 -  17673402 g-gaGA--C------
i Camelus_bactrianus.KN276810.1                          C 0 I 7
s Camelus_dromedarius.KN272107.1                           2336814  6 -   7040546 g-gaGA--C------
i Camelus_dromedarius.KN272107.1                         C 0 I 7
s Camelus_ferus.KB017975.1                                  405112  6 -   1652518 g-gaGA--C------
i Camelus_ferus.KB017975.1                               C 0 I 7
s CanFam4.chr16                                           17801218  5 -  60362399 T-GAGA---------
i CanFam4.chr16                                          C 0 I 537
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     1961  5 -     43241 T-GAGA---------
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 I 535
s Canis_lupus_dingo.QKWQ01000480.1                         9036661  5 -   9314153 t-gaga---------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 537
s Canis_lupus_familiaris.chr16                            17961132  5 -  59632846 t-gaga---------
i Canis_lupus_familiaris.chr16                           C 0 I 535
s Canis_lupus_orion.HG994398.1                            18502434  5 +  63665305 t-gaga---------
i Canis_lupus_orion.HG994398.1                           C 0 I 535
s Capra_aegagrus.CM003241.1                               18833368  6 +  46296322 t-gaga--C------
i Capra_aegagrus.CM003241.1                              C 0 I 7
s Capra_hircus.CM004588.1                                 18064185  6 -  44709034 t-gaga--C------
i Capra_hircus.CM004588.1                                C 0 I 7
s Capromys_pilorides.CapPil_scaffold_65020                    3158  6 -     12242 T-GAAG--T------
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 4
s Carlito_syrichta.NW_007259797.1                           157144  6 -    496798 t-gaaa--t------
i Carlito_syrichta.NW_007259797.1                        C 0 I 5
s Castor_canadensis.CasCan_scaffold_2074                    139115  6 +    179628 T-GAAA--C------
i Castor_canadensis.CasCan_scaffold_2074                 I 13 I 4
s Catagonus_wagneri.CatWag_scaffold_2839                     96006  6 +    217609 T-GAGA--C------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 7
s Cavia_aperea.AVPZ01000300.1                             18351708  6 -  23392119 N-NNNN--N------
i Cavia_aperea.AVPZ01000300.1                            I 18 I 4
s Cavia_porcellus.DS562891.1                              18363968  6 -  23407841 T-GAAA--A------
i Cavia_porcellus.DS562891.1                             I 18 I 4
s Cavia_tschudii.CavTsc_scaffold_8919                       102850  6 +    143979 T-GAAA--A------
i Cavia_tschudii.CavTsc_scaffold_8919                    I 18 I 4
s Cephalopachus_bancanus.k141_1423433                         6643  6 +     31688 T-GAAA--T------
i Cephalopachus_bancanus.k141_1423433                    I 6 I 5
s Cercocebus_atys.KQ010504.1                               4479447  7 +   4669795 t-gaga--ga-----
i Cercocebus_atys.KQ010504.1                             C 0 I 3
s Cercocebus_chrysogaster.k141_1540778                        3941  7 +     17872 T-GAGA--GA-----
i Cercocebus_chrysogaster.k141_1540778                   C 0 I 6
s Cercocebus_lunulatus.k141_3342297                           4536  7 -     14043 T-GAGA--GA-----
i Cercocebus_lunulatus.k141_3342297                      C 0 I 6
s Cercocebus_torquatus.k141_3057011                          12631  7 +     27781 T-GAGA--GA-----
i Cercocebus_torquatus.k141_3057011                      C 0 I 6
s Cercopithecus_ascanius.k141_1024104                        12785  7 -     20310 T-GAGA--GA-----
i Cercopithecus_ascanius.k141_1024104                    C 0 I 6
s Cercopithecus_cephus.k141_1078548                          15761  7 +     29689 T-GAGA--GA-----
i Cercopithecus_cephus.k141_1078548                      C 0 I 6
s Cercopithecus_diana.k141_1150327                           10521  7 -     20078 T-GAGA--GA-----
i Cercopithecus_diana.k141_1150327                       C 0 I 6
s Cercopithecus_hamlyni.k141_187466                          18436  7 -     27936 T-GAGA--GA-----
i Cercopithecus_hamlyni.k141_187466                      C 0 I 6
s Cercopithecus_lowei.k141_1854285                            7307  7 -     17152 T-GAGA--GA-----
i Cercopithecus_lowei.k141_1854285                       C 0 I 6
s Cercopithecus_albogularis.ctg5                                38827031  7 +  39242232 T-GAGA--GA-----
i Cercopithecus_albogularis.ctg5                               C 0 I 6
s Cercopithecus_mona.ctg39                                21226539  7 -  21565898 T-GAGA--GA-----
i Cercopithecus_mona.ctg39                               C 0 I 6
s Cercopithecus_neglectus.k141_2526306                       43658  7 -     53127 T-GAGA--GA-----
i Cercopithecus_neglectus.k141_2526306                   C 0 I 6
s Cercopithecus_nictitans.k141_1119862                        3908  7 +     13442 T-GAGA--GA-----
i Cercopithecus_nictitans.k141_1119862                   C 0 I 6
s Cercopithecus_petaurista.k141_807961                       18454  7 -     27947 T-GAGA--GA-----
i Cercopithecus_petaurista.k141_807961                   C 0 I 6
s Cercopithecus_pogonias.k141_2303387                         1483  7 +     10558 T-GAGA--GA-----
i Cercopithecus_pogonias.k141_2303387                    C 0 I 6
s Cercopithecus_roloway.k141_2581234                          4488  7 +     14005 T-GAGA--GA-----
i Cercopithecus_roloway.k141_2581234                     C 0 I 6
s Cheracebus_lucifer.k141_49986                               1718  7 -     17098 T-GAAA--TA-----
i Cheracebus_lucifer.k141_49986                          C 0 I 6
s Cheracebus_lugens.k141_1393925                              1594  7 +     17877 T-GAAA--TA-----
i Cheracebus_lugens.k141_1393925                         C 0 I 6
s Cheracebus_regulus.k141_471822                            159161  7 -    216457 T-GAAA--TA-----
i Cheracebus_regulus.k141_471822                         C 0 I 6
s Cheracebus_torquatus.k141_1170026                          63636  7 +     76511 T-GAAA--TA-----
i Cheracebus_torquatus.k141_1170026                      C 0 I 6
s Chinchilla_lanigera.JH722012.1                           1254807  6 +   2543920 T-GAAA--T------
i Chinchilla_lanigera.JH722012.1                         C 0 I 4
s Chiropotes_israelita.k141_747660                          100243  7 +    146308 T-GAAA--TA-----
i Chiropotes_israelita.k141_747660                       C 0 I 7
s Chiropotes_sagulatus.k141_1421488                          32050  7 -     50570 T-GAAA--TA-----
i Chiropotes_sagulatus.k141_1421488                      C 0 I 7
s Chlorocebus_aethiops.ctg25                              18432358  7 -  18827391 T-GAGA--GA-----
i Chlorocebus_aethiops.ctg25                             C 0 I 6
s Chlorocebus_pygerythrus.k141_1025673                       18855  7 -     50209 T-GAGA--GA-----
i Chlorocebus_pygerythrus.k141_1025673                   C 0 I 6
s Chlorocebus_sabaeus.CM001947.1                         135425859  7 + 135778131 t-gaga--ga-----
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 6
s Colobus_angolensis.KN981557.1                            1914360  7 +   2368649 t-gaga--ga-----
i Colobus_angolensis.KN981557.1                          C 0 I 6
s Colobus_guereza.LG01                                   199952608  7 + 200372422 T-GAGA--GA-----
i Colobus_guereza.LG01                                   C 0 I 6
s Colobus_polykomos.k141_906115                              40881  7 +     84244 T-GAGA--GA-----
i Colobus_polykomos.k141_906115                          C 0 I 6
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           2245  6 +     23735 T-GAGA--C------
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 I 7
s Cricetomys_gambianus.CriGam_scaffold_18520                 52365  3 +     63868 ---AA---T------
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 4
s Cryptoprocta_ferox.CryFer_flattened_line_16129             30378  6 -     87169 T-GAGA--C------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 1 I 11
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  38083  6 +     51376 T-GAAG--T------
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 4
s Dasyprocta_punctata.DasPun_flattened_line_15900             1789  6 -     75252 T-GAAA--A------
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 127
s Delphinapterus_leucas.KZ290073.1                        16813705  6 +  35494412 t-gaga--C------
i Delphinapterus_leucas.KZ290073.1                       C 0 I 7
s Dinomys_branickii.DinBra_scaffold_21862                    38297  6 +     67921 T-GCGA--T------
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 4
s Dolichotis_patagonum.DolPat_scaffold_30833                 35427  6 -     42551 T-GAAA--A------
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 I 4
s Eidolon_helvum.AWHC01278734.1                                456  6 +      2334 t-gaga--c------
i Eidolon_helvum.AWHC01278734.1                          C 0 I 7
s Elaphurus_davidianus.JRFZ01104969.1                       313839  6 +    607251 t-taga--C------
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 7
s Ellobius_lutescens.LOEQ01008920.1                          22881  3 -    110024 ---aa---t------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 4
s Ellobius_talpinus.LOJH01081419.1                            2801  3 +      8657 ---aa---t------
i Ellobius_talpinus.LOJH01081419.1                       C 0 I 4
s Eptesicus_fuscus.JH977646.1                              2148964  6 -  14770903 t-gaga--c------
i Eptesicus_fuscus.JH977646.1                            I 6 I 7
s Erythrocebus_patas.Contig38                             21209030  7 -  21539334 T-GAGA--GA-----
i Erythrocebus_patas.Contig38                            C 0 I 6
s Eschrichtius_robustus.EscRob_flattened_line_8968           13133  6 +    133382 T-GAGA--C------
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 7
s Eubalaena_japonica.EubJap_flattened_line_31514             27079  6 -     44125 T-GAGA--C------
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 I 7
s Felis_catus.CM001381.2                                  20238941  6 + 206538554 g-gaga--c------
i Felis_catus.CM001381.2                                 C 0 I 7
s Felis_catus_fca126.CM031415.1                           20197816  6 + 205367284 g-gaga--c------
i Felis_catus_fca126.CM031415.1                          C 0 I 7
s Felis_nigripes.FelNig_flattened_line_20823                 11476  6 -     36744 G-GAGA--C------
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 7
s Fukomys_damarensis.KN121974.1                             852427  3 +   3816255 t-GA-----------
i Fukomys_damarensis.KN121974.1                          C 0 I 2
s Galeopterus_variegatus.GalVar_scaffold_108840               4252  6 -      9135 G-GAAA--C------
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 I 7
s Giraffa_tippelskirchi.LVKQ01S007888.1                     611073  7 -    660261 ttgtGA--C------
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 I 7
s Glis_glis.GliGli_scaffold_19807                            33224  6 +     49224 C-AAAA--C------
i Glis_glis.GliGli_scaffold_19807                        C 0 I 4
s Gorilla_beringei.k141_3596273                              19872 12 -     32273 T-GAAA--GAAAAGA
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186342008 12 + 186649187 t-gaaa--gaaaaga
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   35237  6 +     78134 C-AAAA--T------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 4
s Helogale_parvula.HelPar_flattened_line_2585               244185  6 +    327341 T-GAGA--C------
i Helogale_parvula.HelPar_flattened_line_2585            I 1 I 11
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 21674  6 +     36099 T-GAGA--C------
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 I 7
s Heterocephalus_glaber.JH602082.1                        20664068  3 +  22651954 T-GA-----------
i Heterocephalus_glaber.JH602082.1                       C 0 I 2
s Hipposideros_armiger.JXIK01000431.1                       112304  6 +   1711038 t-gaGA--C------
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 7
s Hipposideros_galeritus.HipGal_scaffold_101188                870  6 +      9903 T-GAGA--C------
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 I 7
s Hoolock_leuconedys.ctg274                                    438667  7 +    630532 T-GAAA--GA-----
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46925  6 +     55795 T-GAAA--C------
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 1 I 11
s Hystrix_cristata.HysCri_scaffold_5660                      84992  4 +    135385 T-GAA----------
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 2
s Inia_geoffrensis.IniGeo_flattened_line_34779                 910  6 -     31341 T-GAGA--C------
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 I 7
s Kogia_breviceps.KogBre_flattened_line_81059                  656  6 -     18011 T-GAGA--C------
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 I 7
s Lagothrix_lagothricha.k141_1005387                         16297  7 -     38430 T-GAAA--TG-----
i Lagothrix_lagothricha.k141_1005387                     C 0 I 6
s Lasiurus_borealis.LasBor_scaffold_32767                    18673  6 -     42476 G-GAGA--C------
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 7
s Lipotes_vexillifer.KE559953.1                             269965  6 -    662738 t-gaga--c------
i Lipotes_vexillifer.KE559953.1                          C 0 I 7
s Lophocebus_aterrimus.ctg367                              1440989  7 +   1826925 T-GAGA--GA-----
i Lophocebus_aterrimus.ctg367                            C 0 I 4
s Lycaon_pictus.CM007581.1                                17957372  5 -  59628241 t-gaga---------
i Lycaon_pictus.CM007581.1                               C 0 I 535
s Macaca_arctoides.k141_2326796                              10799  7 +     40492 T-GAGA--GA-----
i Macaca_arctoides.k141_2326796                          C 0 I 6
s Macaca_assamensis.Contig5                               59680053  7 +  60120075 T-GAGA--GA-----
i Macaca_assamensis.Contig5                              C 0 I 6
s Macaca_cyclopis.k119_18836                                 16570  7 -     26193 T-GAGA--GA-----
i Macaca_cyclopis.k119_18836                             C 0 I 6
s Macaca_fascicularis.k141_814140                            84346  7 -    114318 T-GAGA--GA-----
i Macaca_fascicularis.k141_814140                        C 0 I 6
s Macaca_fuscata.k119_255327                                 10037  7 -     23192 T-GAGA--GG-----
i Macaca_fuscata.k119_255327                             C 0 I 6
s Macaca_leonina.k141_3550399                                19501  7 -     29190 T-GAGA--GA-----
i Macaca_leonina.k141_3550399                            C 0 I 6
s Macaca_maura.k141_2733130                                  28079  7 +     37952 T-GAGA--GA-----
i Macaca_maura.k141_2733130                              C 0 I 6
s Macaca_mulatta.NC_041758.1                             186843156  7 + 187317192 t-gaga--ga-----
i Macaca_mulatta.NC_041758.1                             C 0 I 6
s Macaca_nemestrina.KQ007038.1                            25461734  7 -  25927173 t-gaga--ga-----
i Macaca_nemestrina.KQ007038.1                           C 0 I 6
s Macaca_nigra.k141_1655396                                  83935  7 +     89720 T-GAGA--GA-----
i Macaca_nigra.k141_1655396                              C 0 I 6
s Macaca_radiata.k141_3680011                                10928  7 +     20474 T-GAGA--GA-----
i Macaca_radiata.k141_3680011                            C 0 I 6
s Macaca_siberu.k141_635500                                  10725  7 -     14993 T-GAGA--GA-----
i Macaca_siberu.k141_635500                              C 0 I 6
s Macaca_silenus.Contig273                                  333587  7 -    668171 T-GAGA--GA-----
i Macaca_silenus.Contig273                               C 0 I 6
s Macaca_thibetana.k99_256239                                 9037  7 -     24072 T-GAGA--GA-----
i Macaca_thibetana.k99_256239                            C 0 I 6
s Macaca_tonkeana.k141_1498238                               29668  7 -     45290 T-GAGA--GA-----
i Macaca_tonkeana.k141_1498238                           C 0 I 6
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92620  6 +     94391 T-GAGA--C------
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 7
s Mandrillus_leucophaeus.scaffold280                      23941256  7 -  24302211 T-GAGA--GA-----
i Mandrillus_leucophaeus.scaffold280                     C 0 I 6
s Mandrillus_sphinx.Contig270                               355371  7 +    752769 T-GAGA--GA-----
i Mandrillus_sphinx.Contig270                            C 0 I 6
s Manis_javanica.JSZB01003497.1                              20317  6 +    737560 a-tgga--c------
i Manis_javanica.JSZB01003497.1                          C 0 I 7
s Manis_pentadactyla.KN006162.1                              52461  6 -    317179 a-tgga--c------
i Manis_pentadactyla.KN006162.1                          C 0 I 7
s Megaderma_lyra.MegLyr_scaffold_4542                        15187  6 -    207569 T-GAGA--C------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 7
s Meriones_unguiculatus.MerUng_scaffold_7390                 35130  3 +    140813 ---AA---T------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 4
s Mesocricetus_auratus.KB708134.1                         12184591  3 -  29670104 ---aa---t------
i Mesocricetus_auratus.KB708134.1                        C 0 I 4
s Mesoplodon_bidens.MesBid_scaffold_108144                    5347  6 +     10310 T-AAGA--C------
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 I 7
s Microtus_ochrogaster.CM001695.1                         11262857  3 -  27267610 ---aa---t------
i Microtus_ochrogaster.CM001695.1                        C 0 I 4
s Miniopterus_natalensis.LDJU01000034.1                    1852169  6 +   8254450 t-gaga--c------
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 7
s Miniopterus_schreibersii.MinSch_scaffold_18080             35853  6 +     64694 T-GAGA--C------
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 7
s Miopithecus_ogouensis.k141_534055                          12936  7 -     28506 T-GAGA--GA-----
i Miopithecus_ogouensis.k141_534055                      C 0 I 6
s Monodon_monoceros.MonMon_M_scaffold_103                    29090  6 -    437263 T-GAGA--C------
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 7
s Moschus_moschiferus.MosMos_scaffold_13123                   3120  6 +     82753 T-CAGA--C------
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 7
s Murina_feae.MurFea_scaffold_85699                           8924  6 +     14753 T-GCAG--C------
i Murina_feae.MurFea_scaffold_85699                      C 0 I 7
s Mus_caroli.LT608237.1                                   84363521  3 - 120012414 ---aa---t------
i Mus_caroli.LT608237.1                                  C 0 I 4
s Mus_musculus.chr8                                       87653021  3 - 129401213 ---AA---T------
i Mus_musculus.chr8                                      C 0 I 4
s Mus_pahari.LT608297.1                                   31357733  3 -  89631738 ---AA---G------
i Mus_pahari.LT608297.1                                  C 0 I 4
s Mus_spretus.CM004101.1                                  90755510  3 - 130317789 ---aa---t------
i Mus_spretus.CM004101.1                                 C 0 I 4
s Muscardinus_avellanarius.MusAve_scaffold_82313              6714  6 +     14296 C-AAAG--C------
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 4
s Myocastor_coypus.MyoCoy_scaffold_10123                     73343  6 -     80779 T-GAAG--T------
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 I 4
s Myotis_brandtii.KE162005.1                                282671  6 -  10118263 t-gaga--c------
i Myotis_brandtii.KE162005.1                             C 0 I 6
s Myotis_davidii.KB100139.1                                1589986  6 -   6019432 t-gaga--c------
i Myotis_davidii.KB100139.1                              C 0 I 10
s Myotis_lucifugus.GL429869.1                              3906101  6 -   4330536 t-gaga--c------
i Myotis_lucifugus.GL429869.1                            C 0 I 6
s Myotis_myotis.MyoMyo_scaffold_44643                          401  6 +     25416 T-GAGA--C------
i Myotis_myotis.MyoMyo_scaffold_44643                    C 0 I 8
s Nannospalax_galili.KL204518.1                            3930875  6 -   9623020 a-aaaa--a------
i Nannospalax_galili.KL204518.1                          I 41 I 38
s Nasalis_larvatus.k141_413338                               18986  7 +     21681 T-GAGA--GA-----
i Nasalis_larvatus.k141_413338                           C 0 I 6
s Neophocaena_asiaeorientalis.KZ687982.1                   5868053  6 +   7148211 t-gaga--C------
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 7
s Nyctereutes_procyonoides.CAJHUB010000658.1               9151309  5 -   9404916 t-gaga---------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 530
s Ochotona_princeps.JH802162.1                             1366856  6 +   3988456 a-acaa--a------
i Ochotona_princeps.JH802162.1                           I 1 I 4
s Octodon_degus.JH651603.1                                  749275  4 +  11899542 --g---aat------
i Octodon_degus.JH651603.1                               I 7 I 4
s Odocoileus_virginianus.KZ100018.1                         146641  6 +    630418 t-taga--C------
i Odocoileus_virginianus.KZ100018.1                      C 0 I 7
s Okapia_johnstoni.LVCL01S0005463.1                          78977  7 -    150152 ttgcaa--C------
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 7
s Ondatra_zibethicus.OndZib_scaffold_46174                   27522  3 +     28053 ---AA---T------
i Ondatra_zibethicus.OndZib_scaffold_46174               C 0 I 4
s Onychomys_torridus.OnyTor_scaffold_2986                    82915  1 +    102263 --------a------
i Onychomys_torridus.OnyTor_scaffold_2986                I 74 I 4
s Orcinus_orca.KB316932.1                                  2783946  5 -  10937097 t-gaga---------
i Orcinus_orca.KB316932.1                                C 0 I 8
s Otocyon_megalotis.JAEUCK010005147.1                       464396  5 -    559221 t-gaca---------
i Otocyon_megalotis.JAEUCK010005147.1                    T 334 I 867
s Ovis_aries.CM001607.2                                   17589425  6 +  44047080 t-gaga--c------
i Ovis_aries.CM001607.2                                  C 0 I 7
s Ovis_canadensis.OviCan_scaffold_2572                      177627  6 -    191736 T-GAGA--C------
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 I 7
s Pan_paniscus.KQ411613.1                                    47973 12 +     80009 t-gaaa--gaaaaga
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146832 12 + 189151597 t-gaaa--gaaaaga
i Pan_troglodytes.CM009242.2                             C 0 I 29
s Panthera_onca.PanOnc_flattened_line_3271                  153011  6 +    230217 G-GAGA--C------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 7
s Panthera_pardus.KV860321.1                                266322  6 +  18783137 G-GAGA--C------
i Panthera_pardus.KV860321.1                             C 0 I 7
s Panthera_tigris.KE722367.1                               4723148  6 -   8748460 G-GAGA--C------
i Panthera_tigris.KE722367.1                             C 0 I 7
s Pantholops_hodgsonii.KE114653.1                          1268359  6 -   2937107 t-gaga--c------
i Pantholops_hodgsonii.KE114653.1                        C 0 I 7
s Papio_anubis.CM001495.2                                183447062  7 + 183742232 t-gaga--ga-----
i Papio_anubis.CM001495.2                                C 0 I 4
s Papio_cynocephalus.k141_4307930                            10712  7 +     20448 T-GAGA--GA-----
i Papio_cynocephalus.k141_4307930                        C 0 I 4
s Papio_hamadryas.Contig39                                20567520  7 +  20919399 T-GAGA--GA-----
i Papio_hamadryas.Contig39                               C 0 I 4
s Papio_kindae.k141_1936966                                   9452  7 +     41871 T-GAGA--GA-----
i Papio_kindae.k141_1936966                              C 0 I 4
s Papio_papio.k141_802527                                    12745  7 +     27711 T-GAGA--GA-----
i Papio_papio.k141_802527                                C 0 I 4
s Papio_ursinus.k141_5274964                                  3744  7 -     11374 T-GAGA--GA-----
i Papio_ursinus.k141_5274964                             C 0 I 4
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14463  6 -     78924 G-GAGA--C------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 1 I 6
s Peromyscus_maniculatus.KI615324.1                       18197648  3 -  18517816 ---aa---t------
i Peromyscus_maniculatus.KI615324.1                      C 0 I 4
s Petromus_typicus.PetTyp_scaffold_221660                      796  3 -      2102 T-GA-----------
i Petromus_typicus.PetTyp_scaffold_221660                C 0 I 2
s Phocoena_phocoena.PhoPho_flattened_line_24159              11015  6 +     63832 T-GAGA--C------
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 7
s Piliocolobus_badius.k141_1142974                            2064  7 +     68526 T-GAGA--GG-----
i Piliocolobus_badius.k141_1142974                       C 0 I 6
s Piliocolobus_gordonorum.k141_381342                        42209  7 +     89929 T-GAGA--GA-----
i Piliocolobus_gordonorum.k141_381342                    C 0 I 6
s Piliocolobus_kirkii.k141_448987                            43623  7 +     51399 T-GAGA--GA-----
i Piliocolobus_kirkii.k141_448987                        C 0 I 6
s Piliocolobus_tephrosceles.PDMG02000141.1                14299860  7 -  14605196 t-gaga--ga-----
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 6
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3738  6 +     22620 T-GAGA--C------
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 7
s Pithecia_albicans.k141_1476471                              5510  7 +     26961 T-GAAA--TA-----
i Pithecia_albicans.k141_1476471                         C 0 I 6
s Pithecia_chrysocephala.k141_839575                          1655  7 +     23417 T-GAAA--TA-----
i Pithecia_chrysocephala.k141_839575                     C 0 I 6
s Pithecia_hirsuta.k141_305604                                5502  7 +     29694 T-GAAA--TA-----
i Pithecia_hirsuta.k141_305604                           C 0 I 6
s Pithecia_mittermeieri.k141_446740                          30528  7 +     52772 T-GAAA--TA-----
i Pithecia_mittermeieri.k141_446740                      C 0 I 6
s Pithecia_pissinattii.k141_1824269                           5524  7 +     26198 T-GAAA--TA-----
i Pithecia_pissinattii.k141_1824269                      C 0 I 6
s Pithecia_pithecia.tarseq_165                             3942072  7 +   4542175 T-GAAA--TA-----
i Pithecia_pithecia.tarseq_165                           C 0 I 6
s Pithecia_vanzolinii.k141_1697688                            5488  7 -     23490 T-GAAA--TA-----
i Pithecia_vanzolinii.k141_1697688                       C 0 I 6
s Platanista_gangetica.PlaMin_flattened_line_173610            320  6 +      7680 T-GAGA--C------
i Platanista_gangetica.PlaMin_flattened_line_173610      C 0 I 7
s Plecturocebus_bernhardi.k141_2549090                        9739  7 -     39866 T-GAAA--TA-----
i Plecturocebus_bernhardi.k141_2549090                   C 0 I 6
s Plecturocebus_brunneus.k141_1495506                        18905  7 +     34906 T-GAAA--TA-----
i Plecturocebus_brunneus.k141_1495506                    C 0 I 6
s Plecturocebus_caligatus.k141_1382851                       23167  7 +     87950 T-GAAA--TA-----
i Plecturocebus_caligatus.k141_1382851                   C 0 I 6
s Plecturocebus_cinerascens.k141_1164729                     23996  7 +     88961 T-GAAA--TA-----
i Plecturocebus_cinerascens.k141_1164729                 C 0 I 6
s Plecturocebus_cupreus.k141_2351393                          9667  7 +     39403 T-GAAA--CA-----
i Plecturocebus_cupreus.k141_2351393                     C 0 I 3
s Plecturocebus_dubius.k141_1058799                          23448  7 -     87928 T-GAAA--TA-----
i Plecturocebus_dubius.k141_1058799                      C 0 I 6
s Plecturocebus_grovesi.k141_2013005                         30407  7 +     60166 T-GAAA--TA-----
i Plecturocebus_grovesi.k141_2013005                     C 0 I 6
s Plecturocebus_hoffmannsi.k141_3303950                      30604  7 +     67232 T-GAAA--TA-----
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 I 6
s Plecturocebus_miltoni.k141_349282                          26077  7 +     90634 T-GAAA--TA-----
i Plecturocebus_miltoni.k141_349282                      C 0 I 6
s Plecturocebus_moloch.k141_1031110                          23449  7 -     89403 T-GAAA--TA-----
i Plecturocebus_moloch.k141_1031110                      C 0 I 6
s Pongo_abelii.CM009266.2                                189134980  7 + 189387572 t-gaaa--ga-----
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9574590  7 +   9816681 T-GAAA--GA-----
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               77163  7 -     81375 T-GAGA--GA-----
i Presbytis_comata.k141_677006                           C 0 I 6
s Presbytis_mitrata.k141_1087752                              8980  7 +     19060 T-GAGA--GA-----
i Presbytis_mitrata.k141_1087752                         C 0 I 6
s Psammomys_obesus.NESX01036370.1                            12772  3 -     21651 ---aa---t------
i Psammomys_obesus.NESX01036370.1                        C 0 I 4
s Pteropus_alecto.KB030862.1                              22978706  6 +  28871421 t-gaga--c------
i Pteropus_alecto.KB030862.1                             C 0 I 7
s Pteropus_vampyrus.KN525825.1                             1361711  6 +   4952924 t-aaga--c------
i Pteropus_vampyrus.KN525825.1                           C 0 I 7
s Puma_concolor.QAVW01001104.1                            20276211  6 -  38429054 g-gaga--c------
i Puma_concolor.QAVW01001104.1                           C 0 I 7
s Pygathrix_cinerea.k141_1153803                             18973  7 -     91421 T-GAGA--GA-----
i Pygathrix_cinerea.k141_1153803                         C 0 I 6
s Pygathrix_nigripes_b.ctg100                                 7613096  7 +   7812017 T-GAGA--GA-----
i Pygathrix_nigripes_b.ctg100                               C 0 I 6
s Pygathrix_nigripes_a.k141_215492                             19003  7 -     72585 T-GAGA--GA-----
i Pygathrix_nigripes_a.k141_215492                         C 0 I 6
s Rangifer_tarandus.RanTarSib_scaffold_29737                  8476  6 +     55207 T-TAGA--C------
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 7
s Rattus_norvegicus.chr16                                 53573020  3 +  90668790 ---aa---t------
i Rattus_norvegicus.chr16                                C 0 I 4
s Rhinolophus_sinicus.LVEH01000134.1                        368756  6 -   3329780 t-gaga--c------
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 7
s Rhinopithecus_bieti.k119_217274                            10670  7 -     11128 T-CAGA--GA-----
i Rhinopithecus_bieti.k119_217274                        C 0 I 6
s Rhinopithecus_roxellana.NC_044550.1                     91240038  7 - 195417433 t-caga--ga-----
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 6
s Rhinopithecus_strykeri.ctg102                            7675685  7 +   7961872 T-CAGA--GA-----
i Rhinopithecus_strykeri.ctg102                          C 0 I 6
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89777  6 -     96226 T-GAGA--C------
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 7
s Saiga_tatarica.SaiTat_scaffold_133311                        958  6 +      9503 T-GAGA--C------
i Saiga_tatarica.SaiTat_scaffold_133311                  C 0 I 7
s Semnopithecus_entellus.k141_1672505                         3844  7 -     12572 T-GAGA--GA-----
i Semnopithecus_entellus.k141_1672505                    C 0 I 6
s Semnopithecus_hypoleucos.k141_1615806                      30696  7 +     39453 T-GAGA--GA-----
i Semnopithecus_hypoleucos.k141_1615806                  C 0 I 6
s Semnopithecus_johnii.k141_670120                           11204  7 +     27826 T-GAGA--GA-----
i Semnopithecus_johnii.k141_670120                       C 0 I 6
s Semnopithecus_priam.k141_638794                            10745  7 -     19483 T-GAGA--GA-----
i Semnopithecus_priam.k141_638794                        C 0 I 6
s Semnopithecus_schistaceus.k141_1572284                      4043  7 -     12762 T-GAGA--GA-----
i Semnopithecus_schistaceus.k141_1572284                 C 0 I 6
s Semnopithecus_vetulus.k141_910252                           3888  7 +     13763 T-GAGA--GA-----
i Semnopithecus_vetulus.k141_910252                      C 0 I 6
s Sigmodon_hispidus.SigHis_scaffold_42075                     2665  3 -     30804 ---AT---T------
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 I 4
s Suricata_suricatta.SurSur_flattened_line_6629              20445  6 -    196729 T-GAGA--C------
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 I 13
s Sus_scrofa.CM000828.4                                    6813593  6 +  69701581 t-gaga--C------
i Sus_scrofa.CM000828.4                                  C 0 I 7
s Tadarida_brasiliensis.TadBra_scaffold_25820                13117  6 +     41958 T-GAGA--C------
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 7
s Tarsius_lariang.k141_2201908                               27640  6 +     70052 T-GAAA--T------
i Tarsius_lariang.k141_2201908                           C 0 I 5
s Tarsius_wallacei.k141_254427                                2437  6 -     16117 T-GAAA--T------
i Tarsius_wallacei.k141_254427                           C 0 I 5
s Theropithecus_gelada.CM009954.1                        186432368  7 + 186847797 t-gaga--ga-----
i Theropithecus_gelada.CM009954.1                        C 0 I 6
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              107471  3 +    114563 T-GA-----------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 4
s Trachypithecus_auratus.k141_722599                         14782  7 -     20410 T-GAGA--GA-----
i Trachypithecus_auratus.k141_722599                     C 0 I 6
s Trachypithecus_crepusculus.k141_582567                      3905  7 -     12674 T-GAGA--GA-----
i Trachypithecus_crepusculus.k141_582567                 C 0 I 6
s Trachypithecus_cristatus.k141_580354                       14890  7 +     19930 T-GAGA--GA-----
i Trachypithecus_cristatus.k141_580354                   C 0 I 6
s Trachypithecus_francoisi.k141_1412647                      11292  7 -     19997 T-GAGA--GA-----
i Trachypithecus_francoisi.k141_1412647                  C 0 I 6
s Trachypithecus_geei.k141_277701                            51433  7 -     60166 T-GAGA--GA-----
i Trachypithecus_geei.k141_277701                        C 0 I 6
s Trachypithecus_germaini.k141_912491                        18896  7 -     27529 T-GAGA--GA-----
i Trachypithecus_germaini.k141_912491                    C 0 I 6
s Trachypithecus_hatinhensis.k141_17719                        528  7 +      9229 T-GAGA--GA-----
i Trachypithecus_hatinhensis.k141_17719                  C 0 I 6
s Trachypithecus_laotum.k141_907409                          12430  7 -     21137 T-GAGA--GA-----
i Trachypithecus_laotum.k141_907409                      C 0 I 6
s Trachypithecus_leucocephalus.k141_101510                     530  7 +      9131 T-GAGA--GA-----
i Trachypithecus_leucocephalus.k141_101510               C 0 I 6
s Trachypithecus_melamera.k141_105182                          494  7 -      3730 T-GAGA--GA-----
i Trachypithecus_melamera.k141_105182                    C 0 I 6
s Trachypithecus_obscurus.k141_190785                        28762  7 +     32220 T-GAGA--GA-----
i Trachypithecus_obscurus.k141_190785                    C 0 I 6
s Trachypithecus_phayrei.ctg124                            5942859  7 +   6242583 T-GAGA--GA-----
i Trachypithecus_phayrei.ctg124                          C 0 I 6
s Trachypithecus_pileatus.k141_2007326                       12111  7 +     20839 T-GAGA--GA-----
i Trachypithecus_pileatus.k141_2007326                   C 0 I 6
s Tragulus_javanicus.TraJav_scaffold_40725                    2372  6 +     27266 T-GAGA--C------
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 I 7
s Tupaia_chinensis.KB320699.1                              2158273  6 +   4065304 c-aaaa--c------
i Tupaia_chinensis.KB320699.1                            C 0 I 8
s Tupaia_tana.TupTan_flattened_line_306982                     693  6 -      4186 T-GAAA--C------
i Tupaia_tana.TupTan_flattened_line_306982               C 0 I 8
s Tursiops_truncatus.MRVK01000835.1                       15740199  6 +  33153633 t-gaga--c------
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 7
s Vicugna_pacos.KN270157.1                                 5373863  6 -   5488506 g-gaga--c------
i Vicugna_pacos.KN270157.1                               C 0 I 7
s Vulpes_lagopus.VulLag_flattened_line_30954                 12836  5 -     43706 T-GAGA---------
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 537
s Xerus_inauris.XerIna_scaffold_2302                          3040  6 +    224448 C-AAAA--G------
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 3
s Ziphius_cavirostris.ZipCav_flattened_line_761354             502  6 -      1267 T-AAGA--C------
i Ziphius_cavirostris.ZipCav_flattened_line_761354       C 0 I 7
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      16601  0 +     63895 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Uropsilus_gracilis.UroGra_scaffold_12083                   54925 394 -     77625 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tonatia_saurophila.TonSau_scaffold_294                     83098  2 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_85600                    4490  2 +     18632 I
e Tapirus_terrestris.TapTer_scaffold_755                    389823 643 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      121344 643 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Spermophilus_dauricus.KZ294078.1                         1956027 13 -   3870691 I
e Sorex_araneus.JH798187.1                                13652641 429 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    154809 432 -    313613 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Pteronotus_parnellii.KE909381.1                            16825  2 -     21811 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                        67149665 1414 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Noctilio_leporinus.NocLep_scaffold_251                    759530  2 +    783361 I
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 143344  2 -    366855 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Micronycteris_hirsuta.MicHir_scaffold_52381                17753  2 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Marmota_marmota.CZRN01000018.1                          33105160 13 -  40650429 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     8427 743 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Jaculus_jaculus.JH725527.1                               8278673 121 -   9596543 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7522870 13 -   7955117 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23727  0 -    143317 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112577  3 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               35993 651 +    498745 I
e Equus_caballus.CM000403.2                               18533964 651 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1286155 651 +   4378816 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    8624 649 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  675871 642 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8632007  2 +  20541912 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            69437  2 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Crocidura_indochinensis.CroInd_scaffold_239572              3398  0 -      5012 I
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Condylura_cristata.JH655891.1                           17549953 974 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            6415  2 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5047 647 -     25243 I
e Carollia_perspicillata.CarPer_scaffold_92756                7006  2 -     11696 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6662  2 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Anoura_caudifer.AnoCau_scaffold_1412                      187255  2 +    412891 I
e Allactaga_bullata.AllBul_scaffold_9566                     75924 121 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T

a score=0.000000
s hg38.chrUn_KI270753v1                                      10639 30 +     62944 AAA-A---CG----AATA-A---AGG-------TATTGAATT-----------------A--AAAATT
s Acinonyx_jubatus.LLWD01001279.1                           829210 25 -   1699592 agatt----t----aaca-a-agaaa-------t--tcaact-----------------a--a-----
i Acinonyx_jubatus.LLWD01001279.1                        I 7 I 18
s Acomys_cahirinus.AcoCah_scaffold_12655                     73147 13 +     87051 -AT-G----A----GACT-G---A-A-------C--C-------------------------------
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 4 I 233
s Allenopithecus_nigroviridis.k141_3361533                   18501 29 -     52922 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--AAAATT
i Allenopithecus_nigroviridis.k141_3361533               I 6 C 0
s Allochrocebus_lhoesti.k141_4309873                         18438 29 -     28001 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--AAAATT
i Allochrocebus_lhoesti.k141_4309873                     I 6 C 0
s Allochrocebus_preussi.k141_1442296                          8933 29 -     18505 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--AAAATT
i Allochrocebus_preussi.k141_1442296                     I 6 C 0
s Allochrocebus_solatus.k141_166128                           9786 29 -     12518 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--AAAATT
i Allochrocebus_solatus.k141_166128                      I 6 C 0
s Alouatta_belzebul.k141_3560514                             10242 27 +     51355 AAA-C----A----AATA-A---AGG-------GATTGAATT-----------------A--AAAA--
i Alouatta_belzebul.k141_3560514                         I 6 C 0
s Alouatta_caraya.k141_1701091                                3349 27 -     36483 AAA-C----A----AATA-A---AGG-------GATTGAACT-----------------A--AAAA--
i Alouatta_caraya.k141_1701091                           I 6 C 0
s Alouatta_discolor.k141_566626                              13802 27 +     28687 AAA-C----A----AATA-A---AGG-------GATTGAATT-----------------A--AAAA--
i Alouatta_discolor.k141_566626                          I 6 C 0
s Alouatta_juara.k141_1302312                                 2274 27 +     27940 AAA-C----A----AATA-A---AGG-------GATTGAATT-----------------A--AAAA--
i Alouatta_juara.k141_1302312                            I 6 C 0
s Alouatta_macconnelli.k141_918386                            3353 27 -      9457 AAA-C----A----AATA-A---AGG-------GATTGAATT-----------------A--AAAA--
i Alouatta_macconnelli.k141_918386                       I 6 C 0
s Alouatta_nigerrima.k141_1929159                             2311 27 +     30492 AAA-C----A----AATA-A---AGG-------GATTGAATT-----------------A--AAAA--
i Alouatta_nigerrima.k141_1929159                        I 6 C 0
s Alouatta_palliata.k141_2135620                              6306 27 +     47717 AAA-C----A----AATA-A---AGG-------GATTGAATT-----------------A--AAAA--
i Alouatta_palliata.k141_2135620                         I 6 C 0
s Alouatta_puruensis.k141_362188                              3042 27 +      5663 AAA-C----A----AATA-A---AGG-------GATTGAATT-----------------A--AAAA--
i Alouatta_puruensis.k141_362188                         I 6 C 0
s Alouatta_seniculus.k141_117119                             17493 27 +     50774 AAA-C----A----AATA-A---AGG-------GATTGAATT-----------------A--AAAA--
i Alouatta_seniculus.k141_117119                         I 6 C 0
s Ammotragus_lervia.NIVO01071767.1                          679371 24 -   2318259 AAg-t----t----aaccca-gg-gg-------t--tgaact-----------------a--a-----
i Ammotragus_lervia.NIVO01071767.1                       I 7 I 17
s Antilocapra_americana.AntAmePen_scaffold_43303               422 24 -     32520 AAG-T----T----AACC-AAG-GAG-------T--TGAACT-----------------A--A-----
i Antilocapra_americana.AntAmePen_scaffold_43303         I 7 I 17
s Aplodontia_rufa.AprRuf_scaffold_68852                      14571 17 +     20879 --------------AATA-A---AGGGATTGAAC--T-------------------------------
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 3 I 13
s Ateles_geoffroyi_b.tarseq_1536                             21210506 27 -  21539123 AAA-C----A----AATA-A---ATG-------GATTGAATT-----------------A--AAAA--
i Ateles_geoffroyi_b.tarseq_1536                            I 6 C 0
s Ateles_belzebuth.k141_445860                               45302 27 -     48001 AAA-C----A----AATA-A---ATG-------GATTGAATT-----------------A--AAAA--
i Ateles_belzebuth.k141_445860                           I 6 C 0
s Ateles_chamek.k141_1806455                                 28106 27 -     30947 AAA-C----A----AATA-A---ATG-------GATTGAATT-----------------A--AAAA--
i Ateles_chamek.k141_1806455                             I 6 C 0
s Ateles_geoffroyi_a.k141_833924                                9878 27 -     89868 AAA-C----A----AATA-A---ATG-------GATTGAATT-----------------A--AAAA--
i Ateles_geoffroyi_a.k141_833924                           I 6 C 0
s Ateles_marginatus.k141_803263                              14262 27 -     40414 AAA-C----A----AATA-A---ATG-------GATTGAATT-----------------A--AAAA--
i Ateles_marginatus.k141_803263                          I 6 C 0
s Ateles_paniscus.k141_457735                                22151 27 +     72325 AAA-C----A----AATA-A---ATG-------GATTGAATT-----------------A--AAAA--
i Ateles_paniscus.k141_457735                            I 6 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193834 24 +  23207421 aaa-t----t----aaca-a-aggGG-------C--TGAACT-----------------A--A-----
i Balaenoptera_acutorostrata.KI537508.1                  I 7 I 18
s Balaenoptera_bonaerensis.DF707048.1                         4299 24 -     18090 aaa-t----t----aaca-a-aggGG-------C--TGAACT-----------------A--A-----
i Balaenoptera_bonaerensis.DF707048.1                    I 7 I 18
s Beatragus_hunteri.BeaHun_scaffold_50177                    30467 24 +     34529 AAG-T----T----AACC-AAG-GGG-------T--TGAACT-----------------A--A-----
i Beatragus_hunteri.BeaHun_scaffold_50177                I 7 I 17
s Bison_bison.KN261452.1                                    203070 24 -    288883 AAG-T----T----AACC-AAG-GGG-------T--TGAACT-----------------A--A-----
i Bison_bison.KN261452.1                                 I 7 I 17
s Bos_indicus.CM003047.1                                  20276310 24 +  48749331 AAG-T----T----AACC-AAG-GGG-------T--TGAACT-----------------A--A-----
i Bos_indicus.CM003047.1                                 I 7 I 17
s Bos_mutus.JH880303.1                                     1128863 24 -   1948126 AAG-T----T----AACC-AAG-GGG-------T--TGAACT-----------------A--A-----
i Bos_mutus.JH880303.1                                   I 7 I 17
s Bos_taurus.CM000203.6                                   18086948 24 +  45695690 AAG-T----T----AACC-AAG-GGG-------T--TGAACT-----------------A--A-----
i Bos_taurus.CM000203.6                                  I 7 I 17
s Bubalus_bubalis.KI419123.1                               2822909 24 +   4408762 AAG-T----T----AACC-AAG-GGG-------T--TGAACT-----------------A--A-----
i Bubalus_bubalis.KI419123.1                             I 7 I 17
s Cacajao_ayresi.k141_552049                                103127 27 -    122966 AAT-C----A----AATA-A---ATG-------GATTGAATT-----------------A--AAAA--
i Cacajao_ayresi.k141_552049                             I 6 C 0
s Cacajao_calvus.k141_5142                                   62630 27 +     81800 AAT-C----A----AATA-A---ATG-------GATTGAATT-----------------A--AAAA--
i Cacajao_calvus.k141_5142                               I 6 C 0
s Cacajao_hosomi.k141_81245                                  31812 27 -     95584 AAT-C----A----AATA-A---ATG-------GATTGAATT-----------------A--AAAA--
i Cacajao_hosomi.k141_81245                              I 6 C 0
s Cacajao_melanocephalus.k141_619699                         55913 27 -    119600 AAT-C----A----AATA-A---ATG-------GATTGAATT-----------------A--AAAA--
i Cacajao_melanocephalus.k141_619699                     I 6 C 0
s Camelus_bactrianus.KN276810.1                           10004355 24 -  17673402 AAA-T----T----AACG-AAG-GCA-------T--TGAact-----------------a--a-----
i Camelus_bactrianus.KN276810.1                          I 7 I 18
s Camelus_dromedarius.KN272107.1                           2336827 24 -   7040546 AAA-T----T----AACG-AAG-GCA-------T--TGAact-----------------a--a-----
i Camelus_dromedarius.KN272107.1                         I 7 I 18
s Camelus_ferus.KB017975.1                                  405125 24 -   1652518 AAA-T----T----AACG-AAG-GCA-------T--TGAact-----------------a--a-----
i Camelus_ferus.KB017975.1                               I 7 I 18
s Capra_aegagrus.CM003241.1                               18833381 24 +  46296322 AAG-T----T----AACC-AAGG-GG-------T--TGAACT-----------------A--A-----
i Capra_aegagrus.CM003241.1                              I 7 I 17
s Capra_hircus.CM004588.1                                 18064198 24 -  44709034 AAG-T----T----AACC-AAGG-GG-------T--TGAACT-----------------A--A-----
i Capra_hircus.CM004588.1                                I 7 I 17
s Capromys_pilorides.CapPil_scaffold_65020                    3168 14 -     12242 -AA-G----A----GGTT-T---AGA-------C--T-------------------------------
i Capromys_pilorides.CapPil_scaffold_65020               I 4 I 15
s Carlito_syrichta.NW_007259797.1                           157155 29 -    496798 aaa-t----g----aaat-a---agg-------gGTTAAACC-----------------A--AAAAAG
i Carlito_syrichta.NW_007259797.1                        I 5 I 1
s Castor_canadensis.CasCan_scaffold_2074                    139125 25 +    179628 -GA-A----AAGTGAACA-A---AGGGATTAAAC--T-------------------------------
i Castor_canadensis.CasCan_scaffold_2074                 I 4 I 16
s Catagonus_wagneri.CatWag_scaffold_2839                     96019 24 +    217609 ACA-T----T----AACA-A-GGAGG-------T--TGAACT-----------------A--A-----
i Catagonus_wagneri.CatWag_scaffold_2839                 I 7 I 16
s Cavia_aperea.AVPZ01000300.1                             18351718 14 -  23392119 -NN-N----N----NNNN-N---NNN-------N--N-------------------------------
i Cavia_aperea.AVPZ01000300.1                            I 4 I 14
s Cavia_porcellus.DS562891.1                              18363978 14 -  23407841 -AA-G----A----GGGT-T---GGA-------C--T-------------------------------
i Cavia_porcellus.DS562891.1                             I 4 I 14
s Cavia_tschudii.CavTsc_scaffold_8919                       102860 14 +    143979 -AA-G----A----GGGT-T---GGA-------C--T-------------------------------
i Cavia_tschudii.CavTsc_scaffold_8919                    I 4 I 14
s Cephalopachus_bancanus.k141_1423433                         6654 29 +     31688 AAA-T----G----AAAT-A---AGG-------GGTTAAACC-----------------A--AAACAA
i Cephalopachus_bancanus.k141_1423433                    I 5 C 0
s Cercocebus_atys.KQ010504.1                               4479457 29 +   4669795 aaa-t----g----aata-a---agg-------gatggaatt-----------------a--aaaatt
i Cercocebus_atys.KQ010504.1                             I 3 C 0
s Cercocebus_chrysogaster.k141_1540778                        3954 29 +     17872 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--AAAATT
i Cercocebus_chrysogaster.k141_1540778                   I 6 C 0
s Cercocebus_lunulatus.k141_3342297                           4549 29 -     14043 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--AAAATT
i Cercocebus_lunulatus.k141_3342297                      I 6 C 0
s Cercocebus_torquatus.k141_3057011                          12644 29 +     27781 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--AAAATT
i Cercocebus_torquatus.k141_3057011                      I 6 C 0
s Cercopithecus_ascanius.k141_1024104                        12798 29 -     20310 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--AAAATT
i Cercopithecus_ascanius.k141_1024104                    I 6 C 0
s Cercopithecus_cephus.k141_1078548                          15774 29 +     29689 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--AAAATT
i Cercopithecus_cephus.k141_1078548                      I 6 C 0
s Cercopithecus_diana.k141_1150327                           10534 29 -     20078 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--AAAATT
i Cercopithecus_diana.k141_1150327                       I 6 C 0
s Cercopithecus_hamlyni.k141_187466                          18449 29 -     27936 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--AAAATT
i Cercopithecus_hamlyni.k141_187466                      I 6 C 0
s Cercopithecus_lowei.k141_1854285                            7320 29 -     17152 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--AAAATT
i Cercopithecus_lowei.k141_1854285                       I 6 C 0
s Cercopithecus_albogularis.ctg5                                38827044 29 +  39242232 AAA-T----G----AATA-A---AGA-------GATGGAATT-----------------A--AAAATT
i Cercopithecus_albogularis.ctg5                               I 6 C 0
s Cercopithecus_mona.ctg39                                21226552 29 -  21565898 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--AAAATT
i Cercopithecus_mona.ctg39                               I 6 C 0
s Cercopithecus_neglectus.k141_2526306                       43671 29 -     53127 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--AAAATT
i Cercopithecus_neglectus.k141_2526306                   I 6 C 0
s Cercopithecus_nictitans.k141_1119862                        3921 29 +     13442 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--AAAATT
i Cercopithecus_nictitans.k141_1119862                   I 6 C 0
s Cercopithecus_petaurista.k141_807961                       18467 29 -     27947 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--AAAATT
i Cercopithecus_petaurista.k141_807961                   I 6 C 0
s Cercopithecus_pogonias.k141_2303387                         1496 29 +     10558 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--AAAATT
i Cercopithecus_pogonias.k141_2303387                    I 6 C 0
s Cercopithecus_roloway.k141_2581234                          4501 29 +     14005 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--AAAATT
i Cercopithecus_roloway.k141_2581234                     I 6 C 0
s Cheracebus_lucifer.k141_49986                               1731 29 -     17098 AAA-C----A----AATA-A---AGG-------GATTGAATT-----------------A--AAAATT
i Cheracebus_lucifer.k141_49986                          I 6 C 0
s Cheracebus_lugens.k141_1393925                              1607 29 +     17877 AAA-C----A----AATA-A---AGG-------GATTGAATT-----------------A--AAAATT
i Cheracebus_lugens.k141_1393925                         I 6 C 0
s Cheracebus_regulus.k141_471822                            159174 29 -    216457 AAA-C----A----AATA-A---AGG-------GATTGAATT-----------------A--AAAATT
i Cheracebus_regulus.k141_471822                         I 6 C 0
s Cheracebus_torquatus.k141_1170026                          63649 25 +     76511 ---------A----AATA-A---AGG-------GATTGAATT-----------------A--AAAATT
i Cheracebus_torquatus.k141_1170026                      I 6 C 0
s Chinchilla_lanigera.JH722012.1                           1254817 14 +   2543920 -AA-G----A----ACTT-T---GGa-------c--t-------------------------------
i Chinchilla_lanigera.JH722012.1                         I 4 I 15
s Chiropotes_israelita.k141_747660                          100257 39 +    146308 --------------AACA-A---ATG-------GATTGAATTAAAAATTCCTGAAAAACA--AAAA--
i Chiropotes_israelita.k141_747660                       I 7 C 0
s Chiropotes_sagulatus.k141_1421488                          32064 39 -     50570 --------------AACA-A---ATG-------GATTGAATTAAAAATTCCTGAAAAACA--AAAA--
i Chiropotes_sagulatus.k141_1421488                      I 7 C 0
s Chlorocebus_aethiops.ctg25                              18432371 29 -  18827391 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--AAAATT
i Chlorocebus_aethiops.ctg25                             I 6 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18868 29 -     50209 AAA-C----G----AATA-A---AGG-------GATGGAATT-----------------A--AAAATT
i Chlorocebus_pygerythrus.k141_1025673                   I 6 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425872 29 + 135778131 aaa-t----g----aata-a---agg-------gatggaatt-----------------a--aaaatt
i Chlorocebus_sabaeus.CM001947.1                         I 6 C 0
s Colobus_angolensis.KN981557.1                            1914373 29 +   2368649 aaa-t----g----aata-a---agg-------gatggaatt-----------------a--aaaatt
i Colobus_angolensis.KN981557.1                          I 6 C 0
s Colobus_guereza.LG01                                   199952621 29 + 200372422 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--AAAATT
i Colobus_guereza.LG01                                   I 6 C 0
s Colobus_polykomos.k141_906115                              40894 29 +     84244 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--AAAATT
i Colobus_polykomos.k141_906115                          I 6 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           2258 24 +     23735 AAA-T----T----AACA-AAG-AGA-------T--TGAACT-----------------A--A-----
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      I 7 I 20
s Cricetomys_gambianus.CriGam_scaffold_18520                 52372 13 +     63868 -AA-G----A----GCCT-G---A-A-------C--C-------------------------------
i Cricetomys_gambianus.CriGam_scaffold_18520             I 4 I 19
s Cryptoprocta_ferox.CryFer_flattened_line_16129             30395 18 -     87169 ---------T----AACA-AA---GT-------T--TCAACT-----------------A--A-----
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 11 I 18
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  38093 14 +     51376 -AA-G----A----GGTT-T---AGA-------C--T-------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 4 I 15
s Dasyprocta_punctata.DasPun_flattened_line_15900             1922 14 -     75252 -AA-G----A----GGGT-T---GAA-------C--C-------------------------------
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 127 I 15
s Delphinapterus_leucas.KZ290073.1                        16813718 24 +  35494412 AAA-T----T----AACA-AAG-GGG-------C--TGAACT-----------------A--A-----
i Delphinapterus_leucas.KZ290073.1                       I 7 I 17
s Dinomys_branickii.DinBra_scaffold_21862                    38307 14 +     67921 -AA-G----A----TCAT-T---GAA-------C--T-------------------------------
i Dinomys_branickii.DinBra_scaffold_21862                I 4 I 15
s Dolichotis_patagonum.DolPat_scaffold_30833                 35437 14 -     42551 -AA-G----A----AGAT-T---GGA-------C--T-------------------------------
i Dolichotis_patagonum.DolPat_scaffold_30833             I 4 I 15
s Eidolon_helvum.AWHC01278734.1                                469 24 +      2334 aaa-t----c----aaca-a-agggA-------T--TGAAct-----------------a--a-----
i Eidolon_helvum.AWHC01278734.1                          I 7 I 20
s Elaphurus_davidianus.JRFZ01104969.1                       313852 24 +    607251 AAG-T----T----AAGC-AAG-GGA-------T--TGAACT-----------------A--A-----
i Elaphurus_davidianus.JRFZ01104969.1                    I 7 I 17
s Ellobius_lutescens.LOEQ01008920.1                          22888 13 -    110024 -aa-g----a----gaGC-G---A-A-------C--C-------------------------------
i Ellobius_lutescens.LOEQ01008920.1                      I 4 I 254
s Ellobius_talpinus.LOJH01081419.1                            2808 13 +      8657 -aa-g----a----gAGT-G---A-A-------C--C-------------------------------
i Ellobius_talpinus.LOJH01081419.1                       I 4 I 255
s Eptesicus_fuscus.JH977646.1                              2148977 23 -  14770903 aa--t----t----aaca-a-agggA-------T--TGAACT-----------------A--A-----
i Eptesicus_fuscus.JH977646.1                            I 7 I 16
s Erythrocebus_patas.Contig38                             21209043 29 -  21539334 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--AAAATT
i Erythrocebus_patas.Contig38                            I 6 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           13146 24 +    133382 AAA-T----T----AACA-AAG-GGG-------C--TGAACT-----------------A--A-----
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 7 I 18
s Eubalaena_japonica.EubJap_flattened_line_31514             27092 24 -     44125 AAA-T----T----AACA-AAG-GGG-------C--TGAACT-----------------A--A-----
i Eubalaena_japonica.EubJap_flattened_line_31514         I 7 I 18
s Felis_catus.CM001381.2                                  20238954 25 + 206538554 agatt----t----aaca-a-agaaa-------t--tcaact-----------------a--a-----
i Felis_catus.CM001381.2                                 I 7 I 18
s Felis_catus_fca126.CM031415.1                           20197829 25 + 205367284 agatt----t----aaca-a-agaaa-------t--tcaact-----------------a--a-----
i Felis_catus_fca126.CM031415.1                          I 7 I 18
s Felis_nigripes.FelNig_flattened_line_20823                 11489 25 -     36744 AGATT----T----AACA-AAG-AAA-------T--TCAACT-----------------A--A-----
i Felis_nigripes.FelNig_flattened_line_20823             I 7 I 18
s Fukomys_damarensis.KN121974.1                             852432 14 +   3816255 -AA-G----A----AAGG-T---AGA-------C--T-------------------------------
i Fukomys_damarensis.KN121974.1                          I 2 I 12
s Galeopterus_variegatus.GalVar_scaffold_108840               4265 29 -      9135 AAG-A----G----AACA-A---AGG-------Aattgaatt-----------------a--aaattt
i Galeopterus_variegatus.GalVar_scaffold_108840          I 7 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     611087 24 -    660261 AAG-T----T----AACC-AAG-GAG-------T--TGAACT-----------------A--A-----
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 7 I 17
s Glis_glis.GliGli_scaffold_19807                            33234 14 +     49224 -GA-G----A----AACA-A---AGG-------C--T-------------------------------
i Glis_glis.GliGli_scaffold_19807                        I 4 I 22
s Gorilla_beringei.k141_3596273                              19884 30 -     32273 AAA-A---CG----AATA-A---AGG-------TATTGAATT-----------------A--AAAATT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186342020 30 + 186649187 aaa-a---cg----aatA-A---AGG-------TATTGAATT-----------------A--AAAatt
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   35247 14 +     78134 -AA-G----A----AACA-A---AGA-------C--C-------------------------------
i Graphiurus_murinus.GraMur_scaffold_10447               I 4 I 17
s Helogale_parvula.HelPar_flattened_line_2585               244202 20 +    327341 ---------T----AACA-AA-AAGA-------T--TCAAAT-----------------A--A-----
i Helogale_parvula.HelPar_flattened_line_2585            I 11 I 18
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 21687 23 +     36099 AAG-T----T----AACC-AAG--GG-------T--TGAACT-----------------A--A-----
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 7 I 17
s Heterocephalus_glaber.JH602082.1                        20664073 14 +  22651954 -CA-G----A----GAAT-T---GGA-------c--t-------------------------------
i Heterocephalus_glaber.JH602082.1                       I 2 I 15
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112580 24 +    128679 AAA-T----T----AACA-AAG-GGG-------T--TGAAAT-----------------A--A-----
i Hippopotamus_amphibius.HipAmp_scaffold_9076            I 3 I 18
s Hipposideros_armiger.JXIK01000431.1                       112317 24 +   1711038 AAA-C----T----AACA-AA-AGGA-------T--TGAact-----------------a--a-----
i Hipposideros_armiger.JXIK01000431.1                    I 7 I 19
s Hipposideros_galeritus.HipGal_scaffold_101188                883 24 +      9903 AAA-C----T----AACA-AA-AGGA-------T--TGAACT-----------------A--A-----
i Hipposideros_galeritus.HipGal_scaffold_101188          I 7 I 19
s Hoolock_leuconedys.ctg274                                    438674 29 +    630532 AAA-A----A----AATT-A---AGG-------GAGTGAATT-----------------A--AAAATT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46942 20 +     55795 ---------T----AACA-AAG-AGA-------T--TCAACT-----------------A--A-----
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 11 I 18
s Hystrix_cristata.HysCri_scaffold_5660                      84998 14 +    135385 -AA-G----A----GGAT-T---GGA-------C--T-------------------------------
i Hystrix_cristata.HysCri_scaffold_5660                  I 2 I 19
s Ictidomys_tridecemlineatus.JH393364.1                    7522883 20 -   7955117 --a-t----g----aata-a---agggatTGAac--t-------------------------------
i Ictidomys_tridecemlineatus.JH393364.1                  I 13 I 13
s Inia_geoffrensis.IniGeo_flattened_line_34779                 923 24 -     31341 AAA-T----T----AACA-AAG-GGG-------C--TGAACT-----------------A--A-----
i Inia_geoffrensis.IniGeo_flattened_line_34779           I 7 I 18
s Kogia_breviceps.KogBre_flattened_line_81059                  669 24 -     18011 AAA-T----T----AACA-AAG-GGG-------C--TGAACT-----------------A--A-----
i Kogia_breviceps.KogBre_flattened_line_81059            I 7 I 18
s Lagothrix_lagothricha.k141_1005387                         16310 27 -     38430 AAA-C----A----AATA-A---AGG-------GATTGAATT-----------------A--AAAA--
i Lagothrix_lagothricha.k141_1005387                     I 6 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    18686 23 -     42476 AA--C----T----AACA-AAG-GGA-------T--TGAACT-----------------A--A-----
i Lasiurus_borealis.LasBor_scaffold_32767                I 7 I 15
s Lipotes_vexillifer.KE559953.1                             269978 24 -    662738 AAA-T----T----AACA-AAG-GGG-------C--TGAACT-----------------A--A-----
i Lipotes_vexillifer.KE559953.1                          I 7 I 18
s Lophocebus_aterrimus.ctg367                              1441000 29 +   1826925 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--AAAATT
i Lophocebus_aterrimus.ctg367                            I 4 C 0
s Macaca_arctoides.k141_2326796                              10812 29 +     40492 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--AAAATT
i Macaca_arctoides.k141_2326796                          I 6 C 0
s Macaca_assamensis.Contig5                               59680066 29 +  60120075 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--AAAATT
i Macaca_assamensis.Contig5                              I 6 C 0
s Macaca_cyclopis.k119_18836                                 16583 29 -     26193 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--AAAATT
i Macaca_cyclopis.k119_18836                             I 6 C 0
s Macaca_fascicularis.k141_814140                            84359 29 -    114318 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--CAAATT
i Macaca_fascicularis.k141_814140                        I 6 C 0
s Macaca_fuscata.k119_255327                                 10050 29 -     23192 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--AAAATT
i Macaca_fuscata.k119_255327                             I 6 C 0
s Macaca_leonina.k141_3550399                                19514 29 -     29190 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--CAAATT
i Macaca_leonina.k141_3550399                            I 6 C 0
s Macaca_maura.k141_2733130                                  28092 29 +     37952 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--CAAATT
i Macaca_maura.k141_2733130                              I 6 C 0
s Macaca_mulatta.NC_041758.1                             186843169 29 + 187317192 aaa-t----g----aata-a---agg-------gatggaatt-----------------a--aaaatt
i Macaca_mulatta.NC_041758.1                             I 6 C 0
s Macaca_nemestrina.KQ007038.1                            25461747 29 -  25927173 aaa-t----g----aata-a---agg-------gatGGAATT-----------------A--CAAatt
i Macaca_nemestrina.KQ007038.1                           I 6 C 0
s Macaca_nigra.k141_1655396                                  83948 29 +     89720 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--TAAATT
i Macaca_nigra.k141_1655396                              I 6 C 0
s Macaca_radiata.k141_3680011                                10941 29 +     20474 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--AAAATT
i Macaca_radiata.k141_3680011                            I 6 C 0
s Macaca_siberu.k141_635500                                  10738 29 -     14993 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--CAAATT
i Macaca_siberu.k141_635500                              I 6 C 0
s Macaca_silenus.Contig273                                  333600 29 -    668171 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--CAAATT
i Macaca_silenus.Contig273                               I 6 C 0
s Macaca_thibetana.k99_256239                                 9050 29 -     24072 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--AAAATT
i Macaca_thibetana.k99_256239                            I 6 C 0
s Macaca_tonkeana.k141_1498238                               29681 29 -     45290 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--CAAATT
i Macaca_tonkeana.k141_1498238                           I 6 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92633 24 +     94391 AAA-T----C----AACA-AAG-GGA-------T--TGAACT-----------------A--A-----
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 7 I 16
s Mandrillus_leucophaeus.scaffold280                      23941269 29 -  24302211 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--AAAATT
i Mandrillus_leucophaeus.scaffold280                     I 6 C 0
s Mandrillus_sphinx.Contig270                               355384 29 +    752769 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--AAAATT
i Mandrillus_sphinx.Contig270                            I 6 C 0
s Manis_javanica.JSZB01003497.1                              20330  1 +    737560 a-------------------------------------------------------------------
i Manis_javanica.JSZB01003497.1                          I 7 I 536
s Manis_pentadactyla.KN006162.1                              52474  1 -    317179 a-------------------------------------------------------------------
i Manis_pentadactyla.KN006162.1                          I 7 I 537
s Marmota_marmota.CZRN01000018.1                          33105173 20 -  40650429 --a-t----a----aaca-a---agggatTGAac--t-------------------------------
i Marmota_marmota.CZRN01000018.1                         I 13 I 14
s Megaderma_lyra.MegLyr_scaffold_4542                        15200 24 -    207569 AAA-T----T----AACG-AAG-GGA-------T--TGAACT-----------------A--A-----
i Megaderma_lyra.MegLyr_scaffold_4542                    I 7 I 20
s Meriones_unguiculatus.MerUng_scaffold_7390                 35137 13 +    140813 -AA-G----A----AACT-G---A-A-------C--C-------------------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             I 4 I 267
s Mesocricetus_auratus.KB708134.1                         12184598 13 -  29670104 -aa-g----a----gaTT-G---A-A-------T--C-------------------------------
i Mesocricetus_auratus.KB708134.1                        I 4 I 154
s Mesoplodon_bidens.MesBid_scaffold_108144                    5360 24 +     10310 AAA-T----T----AACA-AAG-GGG-------C--TGAACT-----------------A--A-----
i Mesoplodon_bidens.MesBid_scaffold_108144               I 7 I 19
s Microtus_ochrogaster.CM001695.1                         11262864 13 -  27267610 -ga-G----A----GAGT-G---A-A-------C--T-------------------------------
i Microtus_ochrogaster.CM001695.1                        I 4 I 588
s Miniopterus_natalensis.LDJU01000034.1                    1852182 24 +   8254450 aaa-t----t----aaca-a-agggA-------T--TGAACT-----------------A--A-----
i Miniopterus_natalensis.LDJU01000034.1                  I 7 I 16
s Miniopterus_schreibersii.MinSch_scaffold_18080             35866 24 +     64694 AAA-T----T----AACA-AAG-GGA-------T--TGAACT-----------------A--A-----
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 7 I 16
s Miopithecus_ogouensis.k141_534055                          12949 29 -     28506 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--AAAATT
i Miopithecus_ogouensis.k141_534055                      I 6 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    29103 24 -    437263 AAA-T----T----AACA-AAG-GGG-------C--TGAACT-----------------A--A-----
i Monodon_monoceros.MonMon_M_scaffold_103                I 7 I 17
s Moschus_moschiferus.MosMos_scaffold_13123                   3133 24 +     82753 AAG-T----T----AACC-AAG-GGG-------T--TGAACT-----------------A--A-----
i Moschus_moschiferus.MosMos_scaffold_13123              I 7 I 17
s Murina_feae.MurFea_scaffold_85699                           8937 23 +     14753 AA--T----T----AACA-AAG-GGA-------T--TGAACT-----------------A--A-----
i Murina_feae.MurFea_scaffold_85699                      I 7 I 16
s Mus_caroli.LT608237.1                                   84363528 13 - 120012414 -aa-g----A----GACA-G---A-A-------C--C-------------------------------
i Mus_caroli.LT608237.1                                  I 4 I 244
s Mus_musculus.chr8                                       87653028 13 - 129401213 -AA-G----A----GACA-G---A-A-------C--C-------------------------------
i Mus_musculus.chr8                                      I 4 I 244
s Mus_pahari.LT608297.1                                   31357740 13 -  89631738 -GA-G----A----GACA-T---A-A-------C--C-------------------------------
i Mus_pahari.LT608297.1                                  I 4 I 257
s Mus_spretus.CM004101.1                                  90755517 13 - 130317789 -aa-g----A----GACA-G---A-A-------C--C-------------------------------
i Mus_spretus.CM004101.1                                 I 4 I 244
s Muscardinus_avellanarius.MusAve_scaffold_82313              6724 14 +     14296 -AA-G----A----AAGA-A---ATG-------C--T-------------------------------
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 4 I 21
s Myocastor_coypus.MyoCoy_scaffold_10123                     73353 14 -     80779 -AA-G----A----GGTT-T---AGA-------C--T-------------------------------
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 4 I 15
s Myotis_brandtii.KE162005.1                                282683 23 -  10118263 aa--t----t----aaca-a-agggA-------T--TGAACT-----------------A--A-----
i Myotis_brandtii.KE162005.1                             I 6 I 16
s Myotis_davidii.KB100139.1                                1590002 23 -   6019432 aa--t----t----aaca-a-aggga-------T--TGAACT-----------------A--A-----
i Myotis_davidii.KB100139.1                              I 10 I 16
s Myotis_lucifugus.GL429869.1                              3906113 23 -   4330536 aa--a----t----aaca-a-aggga-------T--TGAACT-----------------A--A-----
i Myotis_lucifugus.GL429869.1                            I 6 I 16
s Myotis_myotis.MyoMyo_scaffold_44643                          415 23 +     25416 AA--T----T----AACA-AAG-GGA-------T--TGAACT-----------------A--A-----
i Myotis_myotis.MyoMyo_scaffold_44643                    I 8 I 16
s Nannospalax_galili.KL204047.1                            2038607 13 -   3037898 -aa-g----a----gact-g---a-a-------c--t-------------------------------
i Nannospalax_galili.KL204047.1                          I 10 I 257
s Nasalis_larvatus.k141_413338                               18999 29 +     21681 AAA-T----G----AATA-A---AGG-------GGTGGAATT-----------------A--AAAATT
i Nasalis_larvatus.k141_413338                           I 6 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5868066 24 +   7148211 AAA-T----T----AACA-AAG-GGG-------C--TGAACT-----------------A--A-----
i Neophocaena_asiaeorientalis.KZ687982.1                 I 7 I 17
s Ochotona_princeps.JH802162.1                             1366866 14 +   3988456 -at-a----a----atta-a---aat-------c--t-------------------------------
i Ochotona_princeps.JH802162.1                           I 4 I 8
s Octodon_degus.JH651603.1                                  749283  2 +  11899542 -aa-----------------------------------------------------------------
i Octodon_degus.JH651603.1                               I 4 I 406
s Odocoileus_virginianus.KZ100018.1                         146654 24 +    630418 AAG-T----T----AACC-AAG-GGA-------T--TGAACT-----------------A--A-----
i Odocoileus_virginianus.KZ100018.1                      I 7 I 17
s Okapia_johnstoni.LVCL01S0005463.1                          78991 24 -    150152 AAG-T----T----AACC-AAG-GGG-------T--TGAACT-----------------A--A-----
i Okapia_johnstoni.LVCL01S0005463.1                      I 7 I 17
s Ondatra_zibethicus.OndZib_scaffold_46174                   27529 13 +     28053 -AA-G----A----GAGT-G---A-A-------C--C-------------------------------
i Ondatra_zibethicus.OndZib_scaffold_46174               I 4 N 0
s Onychomys_torridus.OnyTor_scaffold_2986                    82920 13 +    102263 -aa-g----g----ccct-g---g-g-------t--t-------------------------------
i Onychomys_torridus.OnyTor_scaffold_2986                I 4 I 23
s Orcinus_orca.KB316932.1                                  2783959 24 -  10937097 AAA-T----T----AACA-AAG-GGG-------C--TGAACT-----------------A--A-----
i Orcinus_orca.KB316932.1                                I 8 I 17
s Ovis_aries.CM001607.2                                   17589438 23 +  44047080 AAG-T----T----AACC-AAG--GG-------T--TGAACT-----------------A--A-----
i Ovis_aries.CM001607.2                                  I 7 I 17
s Ovis_canadensis.OviCan_scaffold_2572                      177640 23 -    191736 AAG-T----T----AACC-AAG--GG-------T--TGAACT-----------------A--A-----
i Ovis_canadensis.OviCan_scaffold_2572                   I 7 I 17
s Pan_paniscus.KQ411613.1                                    47985 30 +     80009 aaa-a---ca----aata-a---agg-------tattgaatt-----------------a--aaaatt
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03002948.1                             23914 32 +     28717 aaa-aaaccg----aATA-A---AGG-------TAT-GAATT-----------------A--AAAAtt
i Pan_troglodytes.NBAG03002948.1                         I 596 I 80
s Panthera_onca.PanOnc_flattened_line_3271                  153024 25 +    230217 AGATT----T----AACA-AAG-AAA-------T--TCAACT-----------------A--A-----
i Panthera_onca.PanOnc_flattened_line_3271               I 7 I 18
s Panthera_pardus.KV860321.1                                266335 25 +  18783137 AGATT----T----AACA-AAG-AAA-------T--TCAACT-----------------A--A-----
i Panthera_pardus.KV860321.1                             I 7 I 18
s Panthera_tigris.KE722367.1                               4723161 25 -   8748460 AGATT----T----AACA-AAG-AAA-------T--TCAACT-----------------A--A-----
i Panthera_tigris.KE722367.1                             I 7 I 18
s Pantholops_hodgsonii.KE114653.1                          1268372 24 -   2937107 AAG-T----T----AACC-AAG-GGG-------T--TGAACT-----------------A--A-----
i Pantholops_hodgsonii.KE114653.1                        I 7 I 17
s Papio_anubis.CM001495.2                                183447073 29 + 183742232 aaa-t----g----aata-a---agg-------gatggaatt-----------------a--aaaatt
i Papio_anubis.CM001495.2                                I 4 C 0
s Papio_cynocephalus.k141_4307930                            10723 29 +     20448 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--AAAATT
i Papio_cynocephalus.k141_4307930                        I 4 C 0
s Papio_hamadryas.Contig39                                20567531 29 +  20919399 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--AAAATT
i Papio_hamadryas.Contig39                               I 4 C 0
s Papio_kindae.k141_1936966                                   9463 29 +     41871 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--AAAATT
i Papio_kindae.k141_1936966                              I 4 C 0
s Papio_papio.k141_802527                                    12756 29 +     27711 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--AAAATT
i Papio_papio.k141_802527                                I 4 C 0
s Papio_ursinus.k141_5274964                                  3755 29 -     11374 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--AAAATT
i Papio_ursinus.k141_5274964                             I 4 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14475 20 -     78924 ---------T----AACA-AAG-AGA-------T--TCAACT-----------------A--A-----
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 6 I 18
s Peromyscus_maniculatus.KI615324.1                       18197655 13 -  18517816 -aa-g----a----gATT-G---A-A-------C--C-------------------------------
i Peromyscus_maniculatus.KI615324.1                      I 4 I 25
s Petromus_typicus.PetTyp_scaffold_221660                      801 14 -      2102 -TA-G----A----AGGT-T---GGA-------T--T-------------------------------
i Petromus_typicus.PetTyp_scaffold_221660                I 2 I 18
s Phocoena_phocoena.PhoPho_flattened_line_24159              11028 24 +     63832 AAA-T----T----AACA-AAG-GGG-------C--TGAACT-----------------A--A-----
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 7 I 17
s Piliocolobus_badius.k141_1142974                            2077 29 +     68526 AAA-T----G----AATA-A---AGG-------GATGGAACT-----------------A--AAAATT
i Piliocolobus_badius.k141_1142974                       I 6 C 0
s Piliocolobus_gordonorum.k141_381342                        42222 29 +     89929 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--AAAATT
i Piliocolobus_gordonorum.k141_381342                    I 6 C 0
s Piliocolobus_kirkii.k141_448987                            43636 29 +     51399 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--AAAATT
i Piliocolobus_kirkii.k141_448987                        I 6 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299873 29 -  14605196 aaa-t----g----aata-a---agg-------gaTGGAATT-----------------A--AAAatt
i Piliocolobus_tephrosceles.PDMG02000141.1               I 6 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3751 23 +     22620 AA--T----T----AACA-AAG-GGA-------T--TGAACT-----------------A--A-----
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 7 I 16
s Pithecia_albicans.k141_1476471                              5523 29 +     26961 AAA-C----A----AATA-A---ACA-------GACTGAATT-----------------A--AAAATT
i Pithecia_albicans.k141_1476471                         I 6 C 0
s Pithecia_chrysocephala.k141_839575                          1668 24 +     23417 AAA-C----A----AATA-A---ACA-------GACTGAATT-----------------A--A-----
i Pithecia_chrysocephala.k141_839575                     I 6 C 0
s Pithecia_hirsuta.k141_305604                                5515 29 +     29694 AAA-C----A----AATA-A---ACA-------GACTGAATT-----------------A--AAAATT
i Pithecia_hirsuta.k141_305604                           I 6 C 0
s Pithecia_mittermeieri.k141_446740                          30541 29 +     52772 AAA-C----A----AATA-A---ACA-------GACTGAATT-----------------A--AAAATT
i Pithecia_mittermeieri.k141_446740                      I 6 C 0
s Pithecia_pissinattii.k141_1824269                           5537 29 +     26198 AAA-C----A----AATA-A---ACA-------GACTGAATT-----------------A--AAAATT
i Pithecia_pissinattii.k141_1824269                      I 6 C 0
s Pithecia_pithecia.tarseq_165                             3942085 24 +   4542175 AAA-C----A----AATA-A---ACA-------GACTGAATT-----------------A--A-----
i Pithecia_pithecia.tarseq_165                           I 6 C 0
s Pithecia_vanzolinii.k141_1697688                            5501 29 -     23490 AAA-C----A----AATA-A---ACA-------GACTGAATT-----------------A--AAAATT
i Pithecia_vanzolinii.k141_1697688                       I 6 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610            333 24 +      7680 AAA-T----T----AACA-AAG-GGG-------C--TGAACT-----------------A--A-----
i Platanista_gangetica.PlaMin_flattened_line_173610      I 7 I 18
s Plecturocebus_bernhardi.k141_2549090                        9752 29 -     39866 AAA-C----A----AATA-A---AGG-------GATTGAATT-----------------A--AAAATT
i Plecturocebus_bernhardi.k141_2549090                   I 6 C 0
s Plecturocebus_brunneus.k141_1495506                        18918 29 +     34906 AAA-C----A----AATA-A---AGG-------GATTGAATT-----------------A--AAAATT
i Plecturocebus_brunneus.k141_1495506                    I 6 C 0
s Plecturocebus_caligatus.k141_1382851                       23180 29 +     87950 AAA-C----A----AATA-A---AGG-------GATTGAATT-----------------A--AAAATT
i Plecturocebus_caligatus.k141_1382851                   I 6 C 0
s Plecturocebus_cinerascens.k141_1164729                     24009 29 +     88961 AAA-C----A----AATA-A---AGG-------GATTGAATT-----------------A--AAAATT
i Plecturocebus_cinerascens.k141_1164729                 I 6 C 0
s Plecturocebus_cupreus.k141_2351393                          9677 29 +     39403 AAA-C----A----AATA-A---AGG-------GATTGAATT-----------------A--AAAATT
i Plecturocebus_cupreus.k141_2351393                     I 3 C 0
s Plecturocebus_dubius.k141_1058799                          23461 29 -     87928 AAA-C----A----AATA-A---AGG-------GATTGAATT-----------------A--AAAATT
i Plecturocebus_dubius.k141_1058799                      I 6 C 0
s Plecturocebus_grovesi.k141_2013005                         30420 29 +     60166 AAA-C----A----AATA-A---AGG-------GATTGAATT-----------------A--AAAATT
i Plecturocebus_grovesi.k141_2013005                     I 6 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30617 29 +     67232 AAA-C----A----AATA-A---AGG-------GATTGAATT-----------------A--AAAATT
i Plecturocebus_hoffmannsi.k141_3303950                  I 6 C 0
s Plecturocebus_miltoni.k141_349282                          26090 29 +     90634 AAA-C----A----AATA-A---AGG-------GATTGAATT-----------------A--AAAATT
i Plecturocebus_miltoni.k141_349282                      I 6 C 0
s Plecturocebus_moloch.k141_1031110                          23462 29 -     89403 AAA-C----A----AATA-A---AGG-------GATTGAATT-----------------A--AAAATT
i Plecturocebus_moloch.k141_1031110                      I 6 C 0
s Pongo_abelii.CM009266.2                                189134987 30 + 189387572 aaa-a---cG----AATA-A---AGG-------GATTGAATT-----------------A--AAAatt
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9574597 30 +   9816681 AAA-A---CG----AATA-A---AGG-------GATTGAATT-----------------A--AAAATT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               77176 29 -     81375 AAA-T----G----AATA-A---AGG-------GGTGGAATT-----------------A--AAAATT
i Presbytis_comata.k141_677006                           I 6 C 0
s Presbytis_mitrata.k141_1087752                              8993 29 +     19060 AAA-T----G----AATA-A---AGG-------GGTGGAATT-----------------A--AAAATT
i Presbytis_mitrata.k141_1087752                         I 6 C 0
s Psammomys_obesus.NESX01036370.1                            12779 13 -     21651 -aa-g----a----aact-G---A-A-------C--C-------------------------------
i Psammomys_obesus.NESX01036370.1                        I 4 I 259
s Pteropus_alecto.KB030862.1                              22978719 24 +  28871421 aaa-t----t----aaca-a-agggA-------T--TGAact-----------------a--a-----
i Pteropus_alecto.KB030862.1                             I 7 I 18
s Pteropus_vampyrus.KN525825.1                             1361724 24 +   4952924 aaa-t----t----aaca-a-agggA-------T--TGAact-----------------a--a-----
i Pteropus_vampyrus.KN525825.1                           I 7 I 14
s Puma_concolor.QAVW01001104.1                            20276224 25 -  38429054 agatt----t----aaca-a-agaaa-------t--tcaact-----------------a--a-----
i Puma_concolor.QAVW01001104.1                           I 7 I 18
s Pygathrix_cinerea.k141_1153803                             18986 29 -     91421 AAA-T----G----AATA-A---AGG-------GGTGGAATT-----------------A--AAAATT
i Pygathrix_cinerea.k141_1153803                         I 6 C 0
s Pygathrix_nigripes_b.ctg100                                 7613109 29 +   7812017 AAA-T----G----AATA-A---AGG-------GGTGGAATT-----------------A--AAAATT
i Pygathrix_nigripes_b.ctg100                               I 6 C 0
s Pygathrix_nigripes_a.k141_215492                             19016 29 -     72585 AAA-T----G----AATA-A---AGG-------GGTGGAATT-----------------A--AAAATT
i Pygathrix_nigripes_a.k141_215492                         I 6 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  8489 24 +     55207 AAG-T----T----AACC-AAG-GGA-------T--TGAACT-----------------A--A-----
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 7 I 17
s Rattus_norvegicus.chr16                                 53573027 13 +  90668790 -aa-a----a----gact-G---A-A-------C--C-------------------------------
i Rattus_norvegicus.chr16                                I 4 I 246
s Rhinolophus_sinicus.LVEH01000134.1                        368769 24 -   3329780 aaa-t----t----aata-a-aggga-------T--TGAACt-----------------a--a-----
i Rhinolophus_sinicus.LVEH01000134.1                     I 7 I 20
s Rhinopithecus_bieti.k119_217274                            10683 29 -     11128 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--AAAATT
i Rhinopithecus_bieti.k119_217274                        I 6 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91240051 29 - 195417433 aaa-t----g----aata-a---agg-------gatggaatt-----------------a--aaaatt
i Rhinopithecus_roxellana.NC_044550.1                    I 6 C 0
s Rhinopithecus_strykeri.ctg102                            7675698 29 +   7961872 AAA-T----G----AATA-A---AGG-------GATGGAATT-----------------A--AAAATT
i Rhinopithecus_strykeri.ctg102                          I 6 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89790 24 -     96226 AAA-T----C----AACA-AAG-GGA-------T--TGAACT-----------------A--A-----
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 7 I 20
s Saiga_tatarica.SaiTat_scaffold_133311                        971 24 +      9503 AAG-T----T----AACC-AAG-GGG-------T--TGAACT-----------------A--A-----
i Saiga_tatarica.SaiTat_scaffold_133311                  I 7 I 17
s Semnopithecus_entellus.k141_1672505                         3857 29 -     12572 AAA-T----G----AATA-A---AGG-------GGTGGAATT-----------------A--AAAATT
i Semnopithecus_entellus.k141_1672505                    I 6 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30709 29 +     39453 AAA-T----G----AATA-A---AGG-------GGTGGAATT-----------------A--AAAATT
i Semnopithecus_hypoleucos.k141_1615806                  I 6 C 0
s Semnopithecus_johnii.k141_670120                           11217 29 +     27826 AAA-T----G----AATA-A---AGG-------GGTGGAATT-----------------A--AAAATT
i Semnopithecus_johnii.k141_670120                       I 6 C 0
s Semnopithecus_priam.k141_638794                            10758 29 -     19483 AAA-T----G----AATA-A---AGG-------GGTGGAATT-----------------A--AAAATT
i Semnopithecus_priam.k141_638794                        I 6 C 0
s Semnopithecus_schistaceus.k141_1572284                      4056 29 -     12762 AAA-T----G----AATA-A---AGG-------GGTGGAATT-----------------A--AAAATT
i Semnopithecus_schistaceus.k141_1572284                 I 6 C 0
s Semnopithecus_vetulus.k141_910252                           3901 29 +     13763 AAA-T----G----AATG-A---AGG-------GGTGGAATT-----------------A--AAAATT
i Semnopithecus_vetulus.k141_910252                      I 6 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     2672 13 -     30804 -AA-G----A----GACT-G---G-A-------T--C-------------------------------
i Sigmodon_hispidus.SigHis_scaffold_42075                I 4 I 18
s Spermophilus_dauricus.KZ294078.1                         1956040 20 -   3870691 --a-t----g----aaca-a---agggatTGAac--t-------------------------------
i Spermophilus_dauricus.KZ294078.1                       I 13 I 13
s Suricata_suricatta.SurSur_flattened_line_6629              20464 20 -    196729 ---------T----AACA-AAG-AGA-------T--TCAAAT-----------------A--A-----
i Suricata_suricatta.SurSur_flattened_line_6629          I 13 I 16
s Sus_scrofa.CM000828.4                                    6813606 24 +  69701581 AAA-T----T----AACA-A-GGAGG-------T--TGAAct-----------------a--a-----
i Sus_scrofa.CM000828.4                                  I 7 I 16
s Tadarida_brasiliensis.TadBra_scaffold_25820                13130 24 +     41958 AAT-T----T----AACA-AAG-GGA-------T--TAAACT-----------------A--A-----
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 7 I 16
s Tarsius_lariang.k141_2201908                               27651 31 +     70052 AAA-T----G----AAAT-A---AGG-------GGTTAAACC-----------------AAAAAAAAT
i Tarsius_lariang.k141_2201908                           I 5 C 0
s Tarsius_wallacei.k141_254427                                2448 31 -     16117 AAA-T----G----AAAT-A---AGG-------GGTTAAACC-----------------AAAAAAAAT
i Tarsius_wallacei.k141_254427                           I 5 C 0
s Theropithecus_gelada.CM009954.1                        186432381 29 + 186847797 aaa-t----g----aata-a---agg-------gatggaatt-----------------a--aaaatt
i Theropithecus_gelada.CM009954.1                        I 6 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              107478  9 +    114563 ---------------GGT-T---AAA-------C--T-------------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 4 I 15
s Trachypithecus_auratus.k141_722599                         14795 29 -     20410 AAA-T----G----AATA-A---AGG-------GGTGGAATT-----------------A--AAAATT
i Trachypithecus_auratus.k141_722599                     I 6 C 0
s Trachypithecus_crepusculus.k141_582567                      3918 29 -     12674 AAA-T----G----AATA-A---AGG-------GGTGGAATT-----------------A--AAAATT
i Trachypithecus_crepusculus.k141_582567                 I 6 C 0
s Trachypithecus_cristatus.k141_580354                       14903 29 +     19930 AAA-T----G----AATA-A---AGG-------GGTGGAATT-----------------A--AAAATT
i Trachypithecus_cristatus.k141_580354                   I 6 C 0
s Trachypithecus_francoisi.k141_1412647                      11305 29 -     19997 AAA-T----G----AATA-A---AGG-------GGTGGAATT-----------------A--AAAATT
i Trachypithecus_francoisi.k141_1412647                  I 6 C 0
s Trachypithecus_geei.k141_277701                            51446 29 -     60166 AAA-T----G----AATA-A---AGG-------GGTGGAATT-----------------A--AAAATT
i Trachypithecus_geei.k141_277701                        I 6 C 0
s Trachypithecus_germaini.k141_912491                        18909 29 -     27529 AAA-T----G----AATA-A---AGG-------GGTGGAATT-----------------A--AAAATT
i Trachypithecus_germaini.k141_912491                    I 6 C 0
s Trachypithecus_hatinhensis.k141_17719                        541 29 +      9229 AAA-T----G----AATA-A---AGG-------GGTGGAATT-----------------A--AAAATT
i Trachypithecus_hatinhensis.k141_17719                  I 6 C 0
s Trachypithecus_laotum.k141_907409                          12443 29 -     21137 AAA-T----G----AATA-A---AGG-------GGTGGAATT-----------------A--AAAATT
i Trachypithecus_laotum.k141_907409                      I 6 C 0
s Trachypithecus_leucocephalus.k141_101510                     543 29 +      9131 AAA-T----G----AATA-A---AGG-------GGTGGAATT-----------------A--AAAATT
i Trachypithecus_leucocephalus.k141_101510               I 6 C 0
s Trachypithecus_melamera.k141_105182                          507 29 -      3730 AAA-T----G----AATA-A---AGG-------GGTGGAATT-----------------A--AAAATT
i Trachypithecus_melamera.k141_105182                    I 6 C 0
s Trachypithecus_obscurus.k141_190785                        28775 29 +     32220 AAA-T----G----AATA-A---AGG-------GGTGGAATT-----------------A--AAAATT
i Trachypithecus_obscurus.k141_190785                    I 6 C 0
s Trachypithecus_phayrei.ctg124                            5942872 29 +   6242583 AAA-T----G----AATA-A---AGG-------GGTGGAATT-----------------A--AAAATT
i Trachypithecus_phayrei.ctg124                          I 6 C 0
s Trachypithecus_pileatus.k141_2007326                       12124 29 +     20839 AAA-T----G----AATA-A---AGG-------GGTGGAATT-----------------A--AAAATT
i Trachypithecus_pileatus.k141_2007326                   I 6 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    2385 24 +     27266 AAG-T----T----AACA-AAG-GGG-------T--TGAACT-----------------A--A-----
i Tragulus_javanicus.TraJav_scaffold_40725               I 7 I 17
s Tupaia_chinensis.KB320699.1                              2158287 27 +   4065304 AAA-T----G----AACA-G---AGG-------C--TAAACT-----------------A--AAAggt
i Tupaia_chinensis.KB320699.1                            I 8 C 0
s Tupaia_tana.TupTan_flattened_line_306982                     707 27 -      4186 AAA-T----G----AACA-G---AGG-------C--TAAAAT-----------------A--AAAGGT
i Tupaia_tana.TupTan_flattened_line_306982               I 8 C 0
s Tursiops_truncatus.MRVK01000835.1                       15740212 24 +  33153633 AAA-T----T----AACA-AAG-GGG-------C--TGAACT-----------------A--A-----
i Tursiops_truncatus.MRVK01000835.1                      I 7 I 17
s Vicugna_pacos.KN270157.1                                 5373876 24 -   5488506 aaa-t----t----aaag-a-aggtg-------T--TGAAct-----------------a--a-----
i Vicugna_pacos.KN270157.1                               I 7 I 19
s Xerus_inauris.XerIna_scaffold_2302                          3049 20 +    224448 --A-T----A----GACA-A---AAGTATTGAAC--T-------------------------------
i Xerus_inauris.XerIna_scaffold_2302                     I 3 I 19
s Zapus_hudsonius.ZapHud_scaffold_11398                      16601  8 +     63895 ---------------ACA-A---AG--------C--A-------------------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 21
s Ziphius_cavirostris.ZipCav_flattened_line_761354             515 24 -      1267 AAA-T----T----AACA-AAG-GGG-------C--TGAACT-----------------A--A-----
i Ziphius_cavirostris.ZipCav_flattened_line_761354       I 7 I 19
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 12841 537 -     43706 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Uropsilus_gracilis.UroGra_scaffold_12083                   54925 394 -     77625 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tonatia_saurophila.TonSau_scaffold_294                     83098  2 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_85600                    4490  2 +     18632 I
e Tapirus_terrestris.TapTer_scaffold_755                    389823 643 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      121344 643 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Sorex_araneus.JH798187.1                                13652641 429 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    154809 432 -    313613 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Pteronotus_parnellii.KE909381.1                            16825  2 -     21811 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Otocyon_megalotis.JAEUCK010005147.1                       464401 867 -    559221 I
e Oryctolagus_cuniculus.CM000791.1                        67149665 1414 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9151314 530 -   9404916 I
e Noctilio_leporinus.NocLep_scaffold_251                    759530  2 +    783361 I
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 143344  2 -    366855 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Micronycteris_hirsuta.MicHir_scaffold_52381                17753  2 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Lycaon_pictus.CM007581.1                                17957377 535 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     8427 743 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Jaculus_jaculus.JH725527.1                               8278673 121 -   9596543 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23727  0 -    143317 C
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               35993 651 +    498745 I
e Equus_caballus.CM000403.2                               18533964 651 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1286155 651 +   4378816 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    8624 649 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  675871 642 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8632007  2 +  20541912 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            69437  2 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Crocidura_indochinensis.CroInd_scaffold_239572              3398  0 -      5012 I
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Condylura_cristata.JH655891.1                           17549953 974 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            6415  2 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5047 647 -     25243 I
e Carollia_perspicillata.CarPer_scaffold_92756                7006  2 -     11696 I
e Canis_lupus_orion.HG994398.1                            18502439 535 +  63665305 I
e Canis_lupus_familiaris.chr16                            17961137 535 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9036666 537 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     1966 535 -     43241 I
e CanFam4.chr16                                           17801223 537 -  60362399 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6662  2 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Anoura_caudifer.AnoCau_scaffold_1412                      187255  2 +    412891 I
e Allactaga_bullata.AllBul_scaffold_9566                     75924 121 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T

a score=0.000000
s hg38.chrUn_KI270753v1                                      10669 7 +     62944 CTTGGAA
s Allenopithecus_nigroviridis.k141_3361533                   18530 7 -     52922 CTTGGAA
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         18467 7 -     28001 CTTGGAA
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8962 7 -     18505 CTTGGAA
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9815 7 -     12518 CTTGGAA
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Carlito_syrichta.NW_007259797.1                           157185 7 -    496798 CTCAGTA
i Carlito_syrichta.NW_007259797.1                        I 1 C 0
s Cephalopachus_bancanus.k141_1423433                         6683 7 +     31688 CTCAGTA
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4479486 7 +   4669795 cttggaa
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3983 7 +     17872 CTTGGAA
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4578 7 -     14043 CTTGGAA
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12673 7 +     27781 CTTGGAA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12827 7 -     20310 CTTGGAA
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15803 7 +     29689 CTTGGAA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10563 7 -     20078 CTTGGAA
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          18478 7 -     27936 CTTGGAA
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            7349 7 -     17152 CTTGGAA
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38827073 7 +  39242232 CTTGGAA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226581 7 -  21565898 CTTGGAA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43700 7 -     53127 CTTGGAA
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3950 7 +     13442 CTTGGAA
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       18496 7 -     27947 CTTGGAA
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1525 7 +     10558 CTTGGAA
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4530 7 +     14005 CTTGGAA
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1760 7 -     17098 CCTGGAA
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1636 7 +     17877 CCTGGAA
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            159203 7 -    216457 CCTGGAA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63674 7 +     76511 CCTGGAA
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18432400 7 -  18827391 CTTGGAA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18897 7 -     50209 CTTGGAA
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425901 7 + 135778131 cttggaa
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1914402 7 +   2368649 cttggaa
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952650 7 + 200372422 CTTGGAA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40923 7 +     84244 CTTGGAA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Erythrocebus_patas.Contig38                             21209072 7 -  21539334 CTTGGAA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               4294 7 -      9135 ctcagaa
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 I 227
s Gorilla_beringei.k141_3596273                              19914 7 -     32273 CTTGGAA
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186342050 7 + 186649187 cttggaa
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hoolock_leuconedys.ctg274                                    438703 7 +    630532 CTTGGAA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Lophocebus_aterrimus.ctg367                              1441029 7 +   1826925 CTTGGAA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                              10841 7 +     40492 CTTGGAA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59680095 7 +  60120075 CTTGGAA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16612 7 -     26193 CTTGGAA
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            84388 7 -    114318 CTTGGAA
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 10079 7 -     23192 CTTGGAA
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19543 7 -     29190 CTTGGAA
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  28121 7 +     37952 CTTGGAA
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186843198 7 + 187317192 cttggaa
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461776 7 -  25927173 cttggaa
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83977 7 +     89720 CTTGGAA
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10970 7 +     20474 CTTGGAA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10767 7 -     14993 CTTGGAA
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333629 7 -    668171 CTTGGAA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 9079 7 -     24072 CTTGGAA
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29710 7 -     45290 CTTGGAA
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23941298 7 -  24302211 CTTGGAA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355413 7 +    752769 CTTGGAA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Miopithecus_ogouensis.k141_534055                          12978 7 -     28506 CTTGGAA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Nasalis_larvatus.k141_413338                               19028 7 +     21681 ATTGGAA
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Pan_paniscus.KQ411613.1                                    48015 7 +     80009 cttggaa
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146873 7 + 189151597 cttggaa
i Pan_troglodytes.CM009242.2                             I 29 C 0
s Papio_anubis.CM001495.2                                183447102 7 + 183742232 cttggaa
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10752 7 +     20448 CTTGGAA
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567560 7 +  20919399 CTTGGAA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   9492 7 +     41871 CTTGGAA
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12785 7 +     27711 CTTGGAA
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3784 7 -     11374 CTTGGAA
i Papio_ursinus.k141_5274964                             C 0 C 0
s Piliocolobus_badius.k141_1142974                            2106 7 +     68526 CTTGGAA
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        42251 7 +     89929 CTTGGAA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43665 7 +     51399 CTTGGAA
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299902 7 -  14605196 cttggaa
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1476471                              5552 6 +     26961 CCTG-AA
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_hirsuta.k141_305604                                5544 6 +     29694 CCTG-AA
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          30570 6 +     52772 CCTG-AA
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           5566 6 +     26198 CCTG-AA
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            5530 6 -     23490 CCTG-AA
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9781 7 -     39866 CCTGGAA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18947 7 +     34906 CCTGGAA
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       23209 7 +     87950 CCTGGAA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     24038 7 +     88961 CCTGGAA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9706 7 +     39403 CCTGGAA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          23490 7 -     87928 CCTGGAA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         30449 7 +     60166 CCTGGAA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30646 7 +     67232 CCTGGAA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          26119 7 +     90634 CCTGGAA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          23491 7 -     89403 CCTGGAA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189135017 7 + 189387572 cttggaa
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9574627 7 +   9816681 CTTGGAA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               77205 7 -     81375 CTTGGAA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              9022 7 +     19060 CTTGGAA
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Pygathrix_cinerea.k141_1153803                             19015 7 -     91421 CTTGGAA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7613138 7 +   7812017 CTTGGAA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             19045 7 -     72585 CTTGGAA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                            10712 7 -     11128 CTTGGAA
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91240080 7 - 195417433 cttggaa
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675727 7 +   7961872 CTTGGAA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Semnopithecus_entellus.k141_1672505                         3886 7 -     12572 CTTGGAA
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30738 7 +     39453 CTTGGAA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           11246 7 +     27826 CTTGGAA
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10787 7 -     19483 CTTGGAA
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      4085 7 -     12762 CTTGGAA
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3930 7 +     13763 CTTGGAA
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Tarsius_lariang.k141_2201908                               27682 7 +     70052 CTCAGTA
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                2479 7 -     16117 CTCAGTA
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186432410 7 + 186847797 cttggaa
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                         14824 7 -     20410 CTTGGAA
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3947 7 -     12674 CTTGGAA
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14932 7 +     19930 CTTGGAA
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      11334 7 -     19997 CTTGGAA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            51475 7 -     60166 CTTGGAA
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18938 7 -     27529 CTTGGAA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                        570 7 +      9229 CTTGGAA
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          12472 7 -     21137 CTTGGAA
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                     572 7 +      9131 CTTGGAA
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                          536 7 -      3730 CTTGGAA
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28804 7 +     32220 CTTGGAA
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942901 7 +   6242583 CTTGGAA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       12153 7 +     20839 CTTGGAA
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2158314 7 +   4065304 ctcaggg
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_306982                     734 7 -      4186 CTCAAAA
i Tupaia_tana.TupTan_flattened_line_306982               C 0 C 0
e Pithecia_pithecia.tarseq_165                             3942109 0 +   4542175 C
e Pithecia_chrysocephala.k141_839575                          1692 0 +     23417 C
e Lagothrix_lagothricha.k141_1005387                         16337 0 -     38430 C
e Chiropotes_sagulatus.k141_1421488                          32103 0 -     50570 C
e Chiropotes_israelita.k141_747660                          100296 0 +    146308 C
e Cacajao_melanocephalus.k141_619699                         55940 0 -    119600 C
e Cacajao_hosomi.k141_81245                                  31839 0 -     95584 C
e Cacajao_calvus.k141_5142                                   62657 0 +     81800 C
e Cacajao_ayresi.k141_552049                                103154 0 -    122966 C
e Ateles_paniscus.k141_457735                                22178 0 +     72325 C
e Ateles_marginatus.k141_803263                              14289 0 -     40414 C
e Ateles_geoffroyi_a.k141_833924                                9905 0 -     89868 C
e Ateles_chamek.k141_1806455                                 28133 0 -     30947 C
e Ateles_belzebuth.k141_445860                               45329 0 -     48001 C
e Ateles_geoffroyi_b.tarseq_1536                             21210533 0 -  21539123 C
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202 0 +      8798 C
e Galago_senegalensis.k141_631886                             7400 0 +     11339 C
e Galago_moholi.ctg2040                                     429710 0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964 2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Alouatta_seniculus.k141_117119                             17520 0 +     50774 C
e Alouatta_puruensis.k141_362188                              3069 0 +      5663 C
e Alouatta_palliata.k141_2135620                              6333 0 +     47717 C
e Alouatta_nigerrima.k141_1929159                             2338 0 +     30492 C
e Alouatta_macconnelli.k141_918386                            3380 0 -      9457 C
e Alouatta_juara.k141_1302312                                 2301 0 +     27940 C
e Alouatta_discolor.k141_566626                              13829 0 +     28687 C
e Alouatta_caraya.k141_1701091                                3376 0 -     36483 C
e Alouatta_belzebul.k141_3560514                             10269 0 +     51355 C
e Mus_pahari.LT608297.1                                   31357753 257 -  89631738 I
e Mus_spretus.CM004101.1                                  90755530 244 - 130317789 I
e Mus_musculus.chr8                                       87653041 244 - 129401213 I
e Mus_caroli.LT608237.1                                   84363541 244 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445 0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734 0 -     33856 C
e Perodicticus_potto.k141_1186926                              597 0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219 0 -      3244 C
e Ziphius_cavirostris.ZipCav_flattened_line_761354             539 19 -      1267 I
e Zapus_hudsonius.ZapHud_scaffold_11398                      16609 21 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Xerus_inauris.XerIna_scaffold_2302                          3069 19 +    224448 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 12841 537 -     43706 I
e Vicugna_pacos.KN270157.1                                 5373900 19 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Uropsilus_gracilis.UroGra_scaffold_12083                   54925 394 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15740236 17 +  33153633 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_40725                    2409 17 +     27266 I
e Tonatia_saurophila.TonSau_scaffold_294                     83098 2 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_85600                    4490 2 +     18632 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              107487 15 +    114563 I
e Tapirus_terrestris.TapTer_scaffold_755                    389823 643 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      121344 643 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                13154 16 +     41958 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6813630 16 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629              20484 16 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Spermophilus_dauricus.KZ294078.1                         1956060 13 -   3870691 I
e Sorex_araneus.JH798187.1                                13652641 429 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_42075                     2685 18 -     30804 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    154809 432 -    313613 I
e Saiga_tatarica.SaiTat_scaffold_133311                        995 17 +      9503 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                89814 20 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        368793 20 -   3329780 I
e Rattus_norvegicus.chr16                                 53573040 246 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  8513 17 +     55207 I
e Puma_concolor.QAVW01001104.1                            20276249 18 -  38429054 I
e Pteropus_vampyrus.KN525825.1                             1361748 14 +   4952924 I
e Pteropus_alecto.KB030862.1                              22978743 18 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Pteronotus_parnellii.KE909381.1                            16825 2 -     21811 I
e Psammomys_obesus.NESX01036370.1                            12792 259 -     21651 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_173610            357 18 +      7680 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             3774 16 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159              11052 17 +     63832 I
e Petromus_typicus.PetTyp_scaffold_221660                      815 18 -      2102 I
e Peromyscus_maniculatus.KI615324.1                       18197668 25 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14495 18 -     78924 I
e Pantholops_hodgsonii.KE114653.1                          1268396 17 -   2937107 I
e Panthera_tigris.KE722367.1                               4723186 18 -   8748460 I
e Panthera_pardus.KV860321.1                                266360 18 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  153049 18 +    230217 I
e Ovis_canadensis.OviCan_scaffold_2572                      177663 17 -    191736 I
e Ovis_aries.CM001607.2                                   17589461 17 +  44047080 I
e Otocyon_megalotis.JAEUCK010005147.1                       464401 867 -    559221 I
e Oryctolagus_cuniculus.CM000791.1                        67149665 1414 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Orcinus_orca.KB316932.1                                  2783983 17 -  10937097 I
e Onychomys_torridus.OnyTor_scaffold_2986                    82933 23 +    102263 I
e Okapia_johnstoni.LVCL01S0005463.1                          79015 17 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         146678 17 +    630418 I
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Octodon_degus.JH651603.1                                  749285 406 +  11899542 I
e Ochotona_princeps.JH802162.1                             1366880 8 +   3988456 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869 0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414 0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947 0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9151314 530 -   9404916 I
e Noctilio_leporinus.NocLep_scaffold_251                    759530 2 +    783361 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5868090 17 +   7148211 I
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Nannospalax_galili.KL204047.1                            2038620 257 -   3037898 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_44643                          438 16 +     25416 I
e Myotis_lucifugus.GL429869.1                              3906136 16 -   4330536 I
e Myotis_davidii.KB100139.1                                1590025 16 -   6019432 I
e Myotis_brandtii.KE162005.1                                282706 16 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     73367 15 -     80779 I
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Muscardinus_avellanarius.MusAve_scaffold_82313              6738 21 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           8960 16 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398 7 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   3157 17 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 143344 2 -    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                    29127 17 -    437263 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Miniopterus_schreibersii.MinSch_scaffold_18080             35890 16 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1852206 16 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                17753 2 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    5384 19 +     10310 I
e Mesocricetus_auratus.KB708134.1                         12184611 154 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 35150 267 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Megaderma_lyra.MegLyr_scaffold_4542                        15224 20 -    207569 I
e Marmota_marmota.CZRN01000018.1                          33105193 14 -  40650429 I
e Manis_pentadactyla.KN006162.1                              52475 537 -    317179 I
e Manis_javanica.JSZB01003497.1                              20331 536 +    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_8222                 92657 16 +     94391 I
e Lycaon_pictus.CM007581.1                                17957377 535 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             270002 18 -    662738 I
e Lepus_americanus.LepAme_scaffold_107385                     8427 743 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Lasiurus_borealis.LasBor_scaffold_32767                    18709 15 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_81059                  693 18 -     18011 I
e Jaculus_jaculus.JH725527.1                               8278673 121 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_34779                 947 18 -     31341 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7522903 13 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      85012 19 +    135385 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23727 0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  46962 18 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_101188                907 19 +      9903 I
e Hipposideros_armiger.JXIK01000431.1                       112341 19 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112604 18 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20664087 15 +  22651954 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 21710 17 +     36099 I
e Helogale_parvula.HelPar_flattened_line_2585               244222 18 +    327341 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Graphiurus_murinus.GraMur_scaffold_10447                   35261 17 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            33248 22 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     611111 17 -    660261 I
e Galagoides_demidoff.k141_1711393                            4689 0 +     41679 C
e Fukomys_damarensis.KN121974.1                             852446 12 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                 11514 18 -     36744 I
e Felis_catus_fca126.CM031415.1                           20197854 18 + 205367284 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Eubalaena_japonica.EubJap_flattened_line_31514             27116 18 -     44125 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           13170 18 +    133382 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               35993 651 +    498745 I
e Equus_caballus.CM000403.2                               18533964 651 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1286155 651 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2149000 16 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Ellobius_talpinus.LOJH01081419.1                            2821 255 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          22901 254 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       313876 17 +    607251 I
e Eidolon_helvum.AWHC01278734.1                                493 20 +      2334 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 35451 15 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    38321 15 +     67921 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    8624 649 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  675871 642 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8632007 2 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16813742 17 +  35494412 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            69437 2 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_15900             1936 15 -     75252 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  38107 15 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             30413 18 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_239572              3398 0 -      5012 I
e Cricetulus_griseus.LT883664.1                           11668671 0 + 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_18520                 52385 19 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           2282 20 +     23735 I
e Condylura_cristata.JH655891.1                           17549953 974 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1254831 15 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            6415 2 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5047 647 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                       102874 14 +    143979 I
e Cavia_porcellus.DS562891.1                              18363992 14 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18351732 14 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     96043 16 +    217609 I
e Castor_canadensis.CasCan_scaffold_2074                    139150 16 +    179628 I
e Carollia_perspicillata.CarPer_scaffold_92756                7006 2 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                    3182 15 -     12242 I
e Capra_hircus.CM004588.1                                 18064222 17 -  44709034 I
e Capra_aegagrus.CM003241.1                               18833405 17 +  46296322 I
e Canis_lupus_orion.HG994398.1                            18502439 535 +  63665305 I
e Canis_lupus_familiaris.chr16                            17961137 535 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9036666 537 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     1966 535 -     43241 I
e CanFam4.chr16                                           17801223 537 -  60362399 I
e Camelus_ferus.KB017975.1                                  405149 18 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2336851 18 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10004379 18 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2822933 17 +   4408762 I
e Bos_taurus.CM000203.6                                   18086972 17 +  45695690 I
e Bos_mutus.JH880303.1                                     1128887 17 -   1948126 I
e Bos_indicus.CM003047.1                                  20276334 17 +  48749331 I
e Bison_bison.KN261452.1                                    203094 17 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    30491 17 +     34529 I
e Balaenoptera_bonaerensis.DF707048.1                         4323 18 -     18090 I
e Balaenoptera_acutorostrata.KI537508.1                   15193858 18 +  23207421 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6662 2 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         538 0 +      5281 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      14588 13 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_43303               446 17 -     32520 I
e Anoura_caudifer.AnoCau_scaffold_1412                      187255 2 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          679395 17 -   2318259 I
e Allactaga_bullata.AllBul_scaffold_9566                     75924 121 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T
e Acomys_cahirinus.AcoCah_scaffold_12655                     73160 233 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           829235 18 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      10676  5 +     62944 AAA---------------------------CA
s Allenopithecus_nigroviridis.k141_3361533                   18537  5 -     52922 AAA---------------------------CA
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         18474  5 -     28001 AAA---------------------------CA
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8969  5 -     18505 AAA---------------------------CA
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9822  5 -     12518 AAA---------------------------CA
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      14601  2 +     20879 ------------------------------CA
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 13 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    3197  2 -     12242 ------------------------------AA
i Capromys_pilorides.CapPil_scaffold_65020               I 15 I 3
s Carlito_syrichta.NW_007259797.1                           157192  5 -    496798 AAA---------------------------CA
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18351746  2 -  23392119 ------------------------------NN
i Cavia_aperea.AVPZ01000300.1                            I 14 C 0
s Cavia_porcellus.DS562891.1                              18364006  2 -  23407841 ------------------------------ca
i Cavia_porcellus.DS562891.1                             I 14 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                       102888  2 +    143979 ------------------------------CA
i Cavia_tschudii.CavTsc_scaffold_8919                    I 14 C 0
s Cephalopachus_bancanus.k141_1423433                         6690  5 +     31688 AAA---------------------------CA
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4479493  5 +   4669795 aaa---------------------------ca
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3990  5 +     17872 AAA---------------------------CA
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4585  5 -     14043 AAA---------------------------CA
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12680  5 +     27781 AAA---------------------------CA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12834  5 -     20310 AAA---------------------------CA
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15810  5 +     29689 AAA---------------------------CA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10570  5 -     20078 AAA---------------------------CA
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          18485  5 -     27936 AAA---------------------------CA
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            7356  5 -     17152 AAA---------------------------CA
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38827080  5 +  39242232 AAA---------------------------CA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226588  5 -  21565898 AAA---------------------------CA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43707  5 -     53127 AAA---------------------------CA
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3957  5 +     13442 AAA---------------------------CA
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       18503  5 -     27947 AAA---------------------------CA
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1532  5 +     10558 AAA---------------------------CA
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4537  5 +     14005 AAA---------------------------CA
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1767  5 -     17098 AAA---------------------------CA
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1643  5 +     17877 AAA---------------------------CA
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            159210  5 -    216457 AAA---------------------------CA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63681  5 +     76511 AAA---------------------------CA
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254846  2 +   2543920 ------------------------------ca
i Chinchilla_lanigera.JH722012.1                         I 15 C 0
s Chlorocebus_aethiops.ctg25                              18432407  5 -  18827391 AAA---------------------------CA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18904  5 -     50209 AAA---------------------------CA
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425908  5 + 135778131 aaa---------------------------ca
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1914409  5 +   2368649 aaa---------------------------ca
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952657  5 + 200372422 AAA---------------------------CA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40930  5 +     84244 AAA---------------------------CA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 52404  2 +     63868 ------------------------------GG
i Cricetomys_gambianus.CriGam_scaffold_18520             I 19 I 254
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  38122  2 +     51376 ------------------------------TA
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 15 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900             1951  2 -     75252 ------------------------------CA
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 15 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    38336  2 +     67921 ------------------------------CA
i Dinomys_branickii.DinBra_scaffold_21862                I 15 I 4
s Dolichotis_patagonum.DolPat_scaffold_30833                 35466  2 -     42551 ------------------------------CA
i Dolichotis_patagonum.DolPat_scaffold_30833             I 15 C 0
s Erythrocebus_patas.Contig38                             21209079  5 -  21539334 AAA---------------------------CA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               4528 32 -      9135 aaaaaaaaaaaaatttctcagaaaagcaaaca
i Galeopterus_variegatus.GalVar_scaffold_108840          I 227 C 0
s Glis_glis.GliGli_scaffold_19807                            33270  2 +     49224 ------------------------------CA
i Glis_glis.GliGli_scaffold_19807                        I 22 C 0
s Gorilla_beringei.k141_3596273                              19921  5 -     32273 AAA---------------------------CA
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186342057  5 + 186649187 aaa---------------------------ca
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   35278  2 +     78134 ------------------------------CA
i Graphiurus_murinus.GraMur_scaffold_10447               I 17 C 0
s Heterocephalus_glaber.JH602082.1                        20664102  2 +  22651954 ------------------------------ca
i Heterocephalus_glaber.JH602082.1                       I 15 C 0
s Hoolock_leuconedys.ctg274                                    438710  5 +    630532 AAA---------------------------CA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      85031  1 +    135385 ------------------------------C-
i Hystrix_cristata.HysCri_scaffold_5660                  I 19 C 0
s Lophocebus_aterrimus.ctg367                              1441036  5 +   1826925 AAA---------------------------CA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                              10848  5 +     40492 AAA---------------------------CA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59680102  5 +  60120075 AAA---------------------------CA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16619  5 -     26193 AAA---------------------------CA
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            84395  5 -    114318 AAA---------------------------CA
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 10086  5 -     23192 AAA---------------------------CA
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19550  5 -     29190 AAA---------------------------CA
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  28128  5 +     37952 AAA---------------------------CA
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186843205  5 + 187317192 aaa---------------------------ca
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461783  5 -  25927173 aaa---------------------------ca
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83984  5 +     89720 AAA---------------------------CA
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10977  5 +     20474 AAA---------------------------CA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10774  5 -     14993 AAA---------------------------CA
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333636  5 -    668171 AAA---------------------------CA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 9086  5 -     24072 AAA---------------------------CA
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29717  5 -     45290 AAA---------------------------CA
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23941305  5 -  24302211 AAA---------------------------CA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355420  5 +    752769 AAA---------------------------CA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Miopithecus_ogouensis.k141_534055                          12985  5 -     28506 AAA---------------------------CA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              6759  2 +     14296 ------------------------------CA
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 21 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     73382  2 -     80779 ------------------------------TA
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 15 C 0
s Nannospalax_galili.KL204518.1                            3930919  2 -   9623020 ------------------------------ca
i Nannospalax_galili.KL204518.1                          I 38 I 254
s Nasalis_larvatus.k141_413338                               19035  5 +     21681 AAA---------------------------CA
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Ochotona_princeps.JH802162.1                             1366888  2 +   3988456 ------------------------------ct
i Ochotona_princeps.JH802162.1                           I 8 C 0
s Octodon_degus.JH651603.1                                  749691  2 +  11899542 ------------------------------ta
i Octodon_degus.JH651603.1                               I 406 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    82956  2 +    102263 ------------------------------aa
i Onychomys_torridus.OnyTor_scaffold_2986                I 23 I 246
s Pan_paniscus.KQ411613.1                                    48022  5 +     80009 aaa---------------------------ca
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146880  5 + 189151597 aaa---------------------------ca
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                183447109  5 + 183742232 aaa---------------------------ca
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10759  5 +     20448 AAA---------------------------CA
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567567  5 +  20919399 AAA---------------------------CA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   9499  5 +     41871 AAA---------------------------CA
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12792  5 +     27711 AAA---------------------------CA
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3791  5 -     11374 AAA---------------------------CA
i Papio_ursinus.k141_5274964                             C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18197693  2 -  18517816 ------------------------------TG
i Peromyscus_maniculatus.KI615324.1                      I 25 I 246
s Petromus_typicus.PetTyp_scaffold_221660                      833  2 -      2102 ------------------------------CA
i Petromus_typicus.PetTyp_scaffold_221660                I 18 I 21
s Piliocolobus_badius.k141_1142974                            2113  5 +     68526 AAA---------------------------CA
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        42258  5 +     89929 AAA---------------------------CA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43672  5 +     51399 AAA---------------------------CA
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299909  5 -  14605196 aaa---------------------------ca
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1476471                              5558  5 +     26961 AAA---------------------------CA
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_hirsuta.k141_305604                                5550  5 +     29694 AAA---------------------------CA
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          30576  5 +     52772 AAA---------------------------CA
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           5572  5 +     26198 AAA---------------------------CA
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            5536  5 -     23490 AAA---------------------------CA
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9788  5 -     39866 AAA---------------------------CA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18954  5 +     34906 AAA---------------------------CA
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       23216  5 +     87950 AAA---------------------------CA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     24045  5 +     88961 AAA---------------------------CA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9713  5 +     39403 AAA---------------------------CA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          23497  5 -     87928 AAA---------------------------CA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         30456  5 +     60166 AAA---------------------------CA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30653  5 +     67232 AAA---------------------------CA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          26126  5 +     90634 AAA---------------------------CA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          23498  5 -     89403 AAA---------------------------CA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189135024  5 + 189387572 aaa---------------------------ca
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9574634  5 +   9816681 AAA---------------------------CA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               77212  5 -     81375 AAA---------------------------CA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              9029  5 +     19060 AAA---------------------------CA
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Pygathrix_cinerea.k141_1153803                             19022  5 -     91421 AAA---------------------------CA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7613145  5 +   7812017 AAA---------------------------CA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             19052  5 -     72585 AAA---------------------------CA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                            10719  5 -     11128 AAA---------------------------CA
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91240087  5 - 195417433 aaa---------------------------ca
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675734  5 +   7961872 AAA---------------------------CA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Semnopithecus_entellus.k141_1672505                         3893  5 -     12572 AAA---------------------------CA
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30745  5 +     39453 AAA---------------------------CA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           11253  5 +     27826 AAA---------------------------CA
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10794  5 -     19483 AAA---------------------------CA
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      4092  5 -     12762 AAA---------------------------CA
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3937  5 +     13763 AAA---------------------------CA
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     2703  2 -     30804 ------------------------------TG
i Sigmodon_hispidus.SigHis_scaffold_42075                I 18 I 250
s Tarsius_lariang.k141_2201908                               27689  5 +     70052 AAA---------------------------CA
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                2486  5 -     16117 AAA---------------------------CA
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186432417  5 + 186847797 aaa---------------------------ca
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              107502  2 +    114563 ------------------------------CA
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 15 C 0
s Trachypithecus_auratus.k141_722599                         14831  5 -     20410 AAA---------------------------CA
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3954  5 -     12674 AAA---------------------------CA
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14939  5 +     19930 AAA---------------------------CA
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      11341  5 -     19997 AAA---------------------------CA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            51482  5 -     60166 AAA---------------------------CA
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18945  5 -     27529 AAA---------------------------CA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                        577  5 +      9229 AAA---------------------------CA
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          12479  5 -     21137 AAA---------------------------CA
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                     579  5 +      9131 AAA---------------------------CA
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                          543  5 -      3730 AAA---------------------------CA
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28811  5 +     32220 AAA---------------------------CA
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942908  5 +   6242583 AAA---------------------------CA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       12160  5 +     20839 AAA---------------------------CA
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2158321 10 +   4065304 gaaaaaaaa----------------------g
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_306982                     741 10 -      4186 AAA---------------------AAAAAG-G
i Tupaia_tana.TupTan_flattened_line_306982               C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          3088  2 +    224448 ------------------------------CA
i Xerus_inauris.XerIna_scaffold_2302                     I 19 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      16630  2 +     63895 ------------------------------CA
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 21 C 0
e Pithecia_pithecia.tarseq_165                             3942109  0 +   4542175 C
e Pithecia_chrysocephala.k141_839575                          1692  0 +     23417 C
e Lagothrix_lagothricha.k141_1005387                         16337  0 -     38430 C
e Chiropotes_sagulatus.k141_1421488                          32103  0 -     50570 C
e Chiropotes_israelita.k141_747660                          100296  0 +    146308 C
e Cacajao_melanocephalus.k141_619699                         55940  0 -    119600 C
e Cacajao_hosomi.k141_81245                                  31839  0 -     95584 C
e Cacajao_calvus.k141_5142                                   62657  0 +     81800 C
e Cacajao_ayresi.k141_552049                                103154  0 -    122966 C
e Ateles_paniscus.k141_457735                                22178  0 +     72325 C
e Ateles_marginatus.k141_803263                              14289  0 -     40414 C
e Ateles_geoffroyi_a.k141_833924                                9905  0 -     89868 C
e Ateles_chamek.k141_1806455                                 28133  0 -     30947 C
e Ateles_belzebuth.k141_445860                               45329  0 -     48001 C
e Ateles_geoffroyi_b.tarseq_1536                             21210533  0 -  21539123 C
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Alouatta_seniculus.k141_117119                             17520  0 +     50774 C
e Alouatta_puruensis.k141_362188                              3069  0 +      5663 C
e Alouatta_palliata.k141_2135620                              6333  0 +     47717 C
e Alouatta_nigerrima.k141_1929159                             2338  0 +     30492 C
e Alouatta_macconnelli.k141_918386                            3380  0 -      9457 C
e Alouatta_juara.k141_1302312                                 2301  0 +     27940 C
e Alouatta_discolor.k141_566626                              13829  0 +     28687 C
e Alouatta_caraya.k141_1701091                                3376  0 -     36483 C
e Alouatta_belzebul.k141_3560514                             10269  0 +     51355 C
e Mus_pahari.LT608297.1                                   31357753 257 -  89631738 I
e Mus_spretus.CM004101.1                                  90755530 244 - 130317789 I
e Mus_musculus.chr8                                       87653041 244 - 129401213 I
e Mus_caroli.LT608237.1                                   84363541 244 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Ziphius_cavirostris.ZipCav_flattened_line_761354             539 19 -      1267 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 12841 537 -     43706 I
e Vicugna_pacos.KN270157.1                                 5373900 19 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Uropsilus_gracilis.UroGra_scaffold_12083                   54925 394 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15740236 17 +  33153633 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_40725                    2409 17 +     27266 I
e Tonatia_saurophila.TonSau_scaffold_294                     83098  2 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_85600                    4490  2 +     18632 I
e Tapirus_terrestris.TapTer_scaffold_755                    389823 643 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      121344 643 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                13154 16 +     41958 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6813630 16 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629              20484 16 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Spermophilus_dauricus.KZ294078.1                         1956060 13 -   3870691 I
e Sorex_araneus.JH798187.1                                13652641 429 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    154809 432 -    313613 I
e Saiga_tatarica.SaiTat_scaffold_133311                        995 17 +      9503 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                89814 20 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        368793 20 -   3329780 I
e Rattus_norvegicus.chr16                                 53573040 246 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  8513 17 +     55207 I
e Puma_concolor.QAVW01001104.1                            20276249 18 -  38429054 I
e Pteropus_vampyrus.KN525825.1                             1361748 14 +   4952924 I
e Pteropus_alecto.KB030862.1                              22978743 18 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Pteronotus_parnellii.KE909381.1                            16825  2 -     21811 I
e Psammomys_obesus.NESX01036370.1                            12792 259 -     21651 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_173610            357 18 +      7680 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             3774 16 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159              11052 17 +     63832 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14495 18 -     78924 I
e Pantholops_hodgsonii.KE114653.1                          1268396 17 -   2937107 I
e Panthera_tigris.KE722367.1                               4723186 18 -   8748460 I
e Panthera_pardus.KV860321.1                                266360 18 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  153049 18 +    230217 I
e Ovis_canadensis.OviCan_scaffold_2572                      177663 17 -    191736 I
e Ovis_aries.CM001607.2                                   17589461 17 +  44047080 I
e Otocyon_megalotis.JAEUCK010005147.1                       464401 867 -    559221 I
e Oryctolagus_cuniculus.CM000791.1                        67149665 1414 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Orcinus_orca.KB316932.1                                  2783983 17 -  10937097 I
e Okapia_johnstoni.LVCL01S0005463.1                          79015 17 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         146678 17 +    630418 I
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9151314 530 -   9404916 I
e Noctilio_leporinus.NocLep_scaffold_251                    759530  2 +    783361 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5868090 17 +   7148211 I
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_44643                          438 16 +     25416 I
e Myotis_lucifugus.GL429869.1                              3906136 16 -   4330536 I
e Myotis_davidii.KB100139.1                                1590025 16 -   6019432 I
e Myotis_brandtii.KE162005.1                                282706 16 -  10118263 I
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Murina_feae.MurFea_scaffold_85699                           8960 16 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   3157 17 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 143344  2 -    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                    29127 17 -    437263 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Miniopterus_schreibersii.MinSch_scaffold_18080             35890 16 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1852206 16 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                17753  2 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    5384 19 +     10310 I
e Mesocricetus_auratus.KB708134.1                         12184611 154 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 35150 267 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Megaderma_lyra.MegLyr_scaffold_4542                        15224 20 -    207569 I
e Marmota_marmota.CZRN01000018.1                          33105193 14 -  40650429 I
e Manis_pentadactyla.KN006162.1                              52475 537 -    317179 I
e Manis_javanica.JSZB01003497.1                              20331 536 +    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_8222                 92657 16 +     94391 I
e Lycaon_pictus.CM007581.1                                17957377 535 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             270002 18 -    662738 I
e Lepus_americanus.LepAme_scaffold_107385                     8427 743 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Lasiurus_borealis.LasBor_scaffold_32767                    18709 15 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_81059                  693 18 -     18011 I
e Jaculus_jaculus.JH725527.1                               8278673 121 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_34779                 947 18 -     31341 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7522903 13 -   7955117 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23727  0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  46962 18 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_101188                907 19 +      9903 I
e Hipposideros_armiger.JXIK01000431.1                       112341 19 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112604 18 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 21710 17 +     36099 I
e Helogale_parvula.HelPar_flattened_line_2585               244222 18 +    327341 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     611111 17 -    660261 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Fukomys_damarensis.KN121974.1                             852446 12 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                 11514 18 -     36744 I
e Felis_catus_fca126.CM031415.1                           20197854 18 + 205367284 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Eubalaena_japonica.EubJap_flattened_line_31514             27116 18 -     44125 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           13170 18 +    133382 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               35993 651 +    498745 I
e Equus_caballus.CM000403.2                               18533964 651 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1286155 651 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2149000 16 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Ellobius_talpinus.LOJH01081419.1                            2821 255 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          22901 254 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       313876 17 +    607251 I
e Eidolon_helvum.AWHC01278734.1                                493 20 +      2334 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    8624 649 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  675871 642 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8632007  2 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16813742 17 +  35494412 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            69437  2 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             30413 18 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_239572              3398  0 -      5012 I
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           2282 20 +     23735 I
e Condylura_cristata.JH655891.1                           17549953 974 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            6415  2 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5047 647 -     25243 I
e Catagonus_wagneri.CatWag_scaffold_2839                     96043 16 +    217609 I
e Castor_canadensis.CasCan_scaffold_2074                    139150 16 +    179628 I
e Carollia_perspicillata.CarPer_scaffold_92756                7006  2 -     11696 I
e Capra_hircus.CM004588.1                                 18064222 17 -  44709034 I
e Capra_aegagrus.CM003241.1                               18833405 17 +  46296322 I
e Canis_lupus_orion.HG994398.1                            18502439 535 +  63665305 I
e Canis_lupus_familiaris.chr16                            17961137 535 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9036666 537 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     1966 535 -     43241 I
e CanFam4.chr16                                           17801223 537 -  60362399 I
e Camelus_ferus.KB017975.1                                  405149 18 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2336851 18 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10004379 18 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2822933 17 +   4408762 I
e Bos_taurus.CM000203.6                                   18086972 17 +  45695690 I
e Bos_mutus.JH880303.1                                     1128887 17 -   1948126 I
e Bos_indicus.CM003047.1                                  20276334 17 +  48749331 I
e Bison_bison.KN261452.1                                    203094 17 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    30491 17 +     34529 I
e Balaenoptera_bonaerensis.DF707048.1                         4323 18 -     18090 I
e Balaenoptera_acutorostrata.KI537508.1                   15193858 18 +  23207421 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6662  2 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Antilocapra_americana.AntAmePen_scaffold_43303               446 17 -     32520 I
e Anoura_caudifer.AnoCau_scaffold_1412                      187255  2 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          679395 17 -   2318259 I
e Allactaga_bullata.AllBul_scaffold_9566                     75924 121 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T
e Acomys_cahirinus.AcoCah_scaffold_12655                     73160 233 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           829235 18 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      10681 36 +     62944 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----CCA-CT---T--------AAA--------CACAGATTA-----CA
s Acinonyx_jubatus.LLWD01001279.1                           829253 38 -   1699592 -a----a---a---------t-------------t------------------c-atctcACA---------A----C-C-AT---T-A-TA-G-AAG--------CTCAGATTA-----GA
i Acinonyx_jubatus.LLWD01001279.1                        I 18 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     73393 43 +     87051 AG----A---ACA-GGCTCTG-------------T------------------A-GTTTTACA---------A----CCC-AT---TCA-T--G-AAA--------GT-----TC-----GA
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 233 I 5
s Allenopithecus_nigroviridis.k141_3361533                   18542 40 -     52922 AA----A---A---------T-------------T------------------A-ATCTCGCA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         18479 40 -     28001 AA----A---A---------T-------------T------------------A-ATCTCGCA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          8974 40 -     18505 AA----A---A---------T-------------T------------------A-ATCTCGCA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9827 40 -     12518 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----ACC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             10269 54 +     51355 --------------------T-------------TCTTGGAAAAACAAAAATTA-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                3376 54 -     36483 --------------------T-------------TCTTGGAAAAACAAAAATTA-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13829 54 +     28687 --------------------T-------------TCTTGGAAAAACAAAAATTA-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 2301 54 +     27940 --------------------T-------------TCTTGGAAAAACAAAAATTA-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            3380 54 -      9457 --------------------T-------------TCTTGGAAAAACAAAAATTA-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             2338 54 +     30492 --------------------T-------------TCTTGGAAAAACAAAAATTA-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              6333 54 +     47717 --------------------T-------------TCTTGGAAAAACAAAAATTA-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              3069 54 +      5663 --------------------T-------------TCTTGGAAAAACAAAAATTA-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             17520 54 +     50774 --------------------T-------------TCTTGGAAAAACAAAAATTA-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          679412 33 -   2318259 -------------------------------------------------------ATCTTATA---------A----TCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----AA
i Ammotragus_lervia.NIVO01071767.1                       I 17 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303               463 33 -     32520 -------------------------------------------------------ATCTTATA---------A----TAC-AT---T-G-AA-G-AGA--------CTCAGATTA-----AA
i Antilocapra_americana.AntAmePen_scaffold_43303         I 17 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      14603 33 +     20879 AA----A---A---------T-------------T------------------A-GACTCATA---------A----CCC-AT---T-A-GA-G-AAA--------C-------A-----GA
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 5
s Ateles_geoffroyi_b.tarseq_1536                             21210533 54 -  21539123 --------------------T-------------TCTTGGAAAAACAAAAATTA-ATCTCACA---------A----TCC-AT---T-A-AA-G-AAA--------CCCAGATTA-----CA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               45329 54 -     48001 --------------------T-------------TCTTGGAAAAACAAAAATTA-ATCTCACA---------A----TCC-AT---T-A-AA-G-AAA--------CCCAGATTA-----CA
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 28133 54 -     30947 --------------------T-------------TCTTGGAAAAACAAAAATTA-ATCTCACA---------A----TCC-AT---T-A-AA-G-AAA--------CCCAGATTA-----CA
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9905 54 -     89868 --------------------T-------------TCTTGGAAAAACAAAAATTA-ATCTCACA---------A----TCC-AT---T-A-AA-G-AAA--------CCCAGATTA-----CA
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              14289 54 -     40414 --------------------T-------------TCTTGGAAAAACAAAAATTA-ATCTCACA---------A----TCC-AT---T-A-AA-G-AAA--------CCCAGATTA-----CA
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                22178 54 +     72325 --------------------T-------------TCTTGGAAAAACAAAAATTA-ATCTCACA---------A----TCC-AT---T-A-AA-G-AAA--------CCCAGATTA-----CA
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193876 40 +  23207421 AG----A---A---------T-------------T------------------A-ATCTCATA---------A----CCC-AT---T-A-AA-G-AAA--------TTCAGATTA-----AA
i Balaenoptera_acutorostrata.KI537508.1                  I 18 C 0
s Balaenoptera_bonaerensis.DF707048.1                         4341 40 -     18090 AG----A---A---------T-------------T------------------A-ATCTCATA---------A----CCC-AT---T-A-AA-G-AAA--------TTCAGATTA-----AA
i Balaenoptera_bonaerensis.DF707048.1                    I 18 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    30508 33 +     34529 -------------------------------------------------------GTCTTATA---------A----TCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----AA
i Beatragus_hunteri.BeaHun_scaffold_50177                I 17 C 0
s Bison_bison.KN261452.1                                    203111 42 -    288883 -------------------------------------------------------ATCTTATAAGATTGTTTA----TCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----AA
i Bison_bison.KN261452.1                                 I 17 C 0
s Bos_indicus.CM003047.1                                  20276351 41 +  48749331 -------------------------------------------------------ATCTTATAAGAT-GTTTA----TCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----AA
i Bos_indicus.CM003047.1                                 I 17 C 0
s Bos_mutus.JH880303.1                                     1128904 42 -   1948126 -------------------------------------------------------ATCTTATAAGATTGTTTA----TCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----AA
i Bos_mutus.JH880303.1                                   I 17 C 0
s Bos_taurus.CM000203.6                                   18086989 41 +  45695690 -------------------------------------------------------ATCTTATAAGAT-GTTTA----TCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----AA
i Bos_taurus.CM000203.6                                  I 17 C 0
s Bubalus_bubalis.KI419123.1                               2822950 33 +   4408762 -------------------------------------------------------ATCTTATA---------A----TCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----AA
i Bubalus_bubalis.KI419123.1                             I 17 C 0
s Cacajao_ayresi.k141_552049                                103154 49 -    122966 --------------------TTCCTGAAAAAAATT------------------A-ATCTCACA---------A----CCC-AC---T-A-AA-G-AAA--------CTCAGATCA-----CA
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   62657 49 +     81800 --------------------TTCCTGAAAAAAATT------------------A-ATCTCACA---------A----CCC-AC---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31839 49 -     95584 --------------------TTCCTGAAAAAAATT------------------A-ATCTCACA---------A----CCC-AC---T-A-AA-G-AAA--------CTCAGATCA-----CA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55940 49 -    119600 --------------------TTCCTGAAAAAAATT------------------A-ATCTCACA---------A----CCT-AC---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10004397 40 -  17673402 ag----a---a---------t-------------t------------------a-atctCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----AA
i Camelus_bactrianus.KN276810.1                          I 18 C 0
s Camelus_dromedarius.KN272107.1                           2336869 40 -   7040546 ag----a---a---------t-------------t------------------a-atctCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----AA
i Camelus_dromedarius.KN272107.1                         I 18 C 0
s Camelus_ferus.KB017975.1                                  405167 40 -   1652518 ag----a---a---------t-------------t------------------a-atctCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----AA
i Camelus_ferus.KB017975.1                               I 18 C 0
s Capra_aegagrus.CM003241.1                               18833422 33 +  46296322 -------------------------------------------------------ATCTTATA---------A----TCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----AA
i Capra_aegagrus.CM003241.1                              I 17 C 0
s Capra_hircus.CM004588.1                                 18064239 33 -  44709034 -------------------------------------------------------ATCTTATA---------A----TCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----AA
i Capra_hircus.CM004588.1                                I 17 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    3202 32 -     12242 ----------A---------T-------------T------------------A-ACATCACA---------A----TCC-AC---T-A--ATG-AAA--------CT-----TA-----GA
i Capromys_pilorides.CapPil_scaffold_65020               I 3 C 0
s Carlito_syrichta.NW_007259797.1                           157197 40 -    496798 AA----A---G---------T-------------T------------------A-GTCTCACA---------A----CCC-TT---T-A-AA-G-AAA--------CTCAGATTA-----GA
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    139166 19 +    179628 -----------------------------------------------------------------------------TTC-AT---T-A--ATG-AAA--------TT-----TA-----GA
i Castor_canadensis.CasCan_scaffold_2074                 I 16 I 5
s Catagonus_wagneri.CatWag_scaffold_2839                     96059 33 +    217609 AG----A---A---------T-------------T------------------A-ATCTCACA---------A----TCC-GT---T-A-AA-G-AAA---------------CA-----AA
i Catagonus_wagneri.CatWag_scaffold_2839                 I 16 C 0
s Cavia_aperea.AVPZ01000300.1                             18351748 39 -  23392119 NN---NNNNNN---------N-------------N------------------N-NNNNNNNN---------N----NNN-NN---N-N-NN-N-NNN--------NN-----NN-----NN
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18364008 39 -  23407841 aa---taaaaa---------t-------------t------------------a-gtcTCACA---------A----TCC-AC---T-A--ATG-AAA--------CT-----TA-----GA
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                       102890 39 +    143979 AA---TAAAAA---------T-------------T------------------A-GTCTCACA---------A----TCC-AC---T-A--ATG-AAA--------CT-----TA-----GA
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         6695 40 +     31688 AA----A---A---------T-------------T------------------A-GTCTCACA---------A----CCC-TT---T-A-AA-G-AAA--------CTCAGATTA-----GA
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4479498 40 +   4669795 aa----a---a---------t-------------t------------------a-atctcACA---------A----TCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        3995 40 +     17872 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----TCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4590 40 -     14043 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----TCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12685 40 +     27781 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----TCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12839 40 -     20310 AA----A---A---------T-------------T------------------A-ATCTCGCA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15815 40 +     29689 AA----A---A---------T-------------T------------------A-ATCTCGCA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10575 40 -     20078 AA----A---A---------T-------------T------------------A-ATCTCGCA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          18490 22 -     27936 AA----A---A---------T-------------T------------------A-ATCTCGCA---------A----CCC-AT---T-----------------------------------
i Cercopithecus_hamlyni.k141_187466                      C 0 I 14
s Cercopithecus_lowei.k141_1854285                            7361 40 -     17152 AA----A---A---------T-------------T------------------A-ATCTCGCA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38827085 40 +  39242232 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226593 40 -  21565898 AA----A---A---------T-------------T------------------A-ATCTCGCA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43712 40 -     53127 AA----A---A---------T-------------T------------------A-ATCTCGCA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        3962 40 +     13442 AA----A---A---------T-------------T------------------A-ATCTCGCA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       18508 40 -     27947 AA----A---A---------C-------------T------------------A-ATCTCGCA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1537 36 +     10558 AA----A---A---------T-------------T------------------A-ATCTCGCA---------A----CCC-AT---T--------AAA--------CTCAGATTA-----CA
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4542 40 +     14005 AA----A---A---------T-------------T------------------A-ATCTCGCA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1772 40 -     17098 AA----A---A---------T-------------T------------------A-ATTTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1648 40 +     17877 AA----A---A---------T-------------T------------------A-ATTTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            159215 40 -    216457 AA----A---A---------T-------------T------------------A-ATTTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63686 40 +     76511 AA----A---A---------T-------------T------------------A-ATTTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254848 35 +   2543920 aa----a---a---------t-------------t------------------a-gtccCCCA---------A----TCC-AC---T-A--ATG-AAA--------CT-----TA-----TA
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_israelita.k141_747660                          100296 36 +    146308 --------------------T-------------T------------------A-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          32103 36 -     50570 --------------------T-------------T------------------A-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18432412 40 -  18827391 AA----A---A---------T-------------T------------------A-ATCTTGCA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18909 40 -     50209 AA----A---A---------T-------------T------------------A-ATCTTGCA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425913 40 + 135778131 aa----a---a---------t-------------t------------------a-atcttGCA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1914414 40 +   2368649 aa----a---a---------t-------------t------------------a-atctcGCA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952662 40 + 200372422 AA----A---A---------T-------------T------------------A-ATCTCGCA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40935 40 +     84244 AA----A---A---------T-------------T------------------A-ATCTCGCA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           2302 40 +     23735 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----CCC-AC---T-AATA---AAA--------CTCAAATTA-----GA
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      I 20 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 52660 43 +     63868 GA----A---A-CTGTTTCTG-------------T------------------A-GTTCTGCA---------A----CCC-AT---TCA-T--G-AAA--------CT-----TA-----GA
i Cricetomys_gambianus.CriGam_scaffold_18520             I 254 I 5
s Cryptoprocta_ferox.CryFer_flattened_line_16129             30431 38 -     87169 -A----A---A---------T-------------T------------------A-ATCTCACA---------A----C-C-AT---T-A-AA-G-AAG--------CTCAGATTA-----GA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 18 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  38124 39 +     51376 AACAAAA---A---------T-------------T------------------A-AAATCACA---------A----TCC-AC---T-A--ATG-AAA--------CT-----TA-----GA
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900             1953 39 -     75252 AAC---AAAAA---------T-------------T------------------A-GTCTTACA---------A----TCC-AC---T-A--ATG-AAA--------CT-----TA-----GA
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16813759 40 +  35494412 ag----a---a---------t-------------t------------------a-atttcatA---------A----CCC-AT---T-A-AA-G-AAA--------TTCAGATTA-----AA
i Delphinapterus_leucas.KZ290073.1                       I 17 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    38342 23 +     67921 ------------------------------------------------------------AAA---------A----TCC-AC---T-A--ATG-AAA--------CT-----TA-----GA
i Dinomys_branickii.DinBra_scaffold_21862                I 4 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 35468 39 -     42551 AAC---AAAAA---------T-------------T------------------A-GTCTCACA---------A----TCC-AC---T-A--ATG-ACA--------CT-----TA-----GA
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.AWHC01278734.1                                513 40 +      2334 aa----a---a---------t-------------t------------------a-atctcACG---------A----CCC-AT---T-A-AA-A-ACA--------CTCAGATTA-----GA
i Eidolon_helvum.AWHC01278734.1                          I 20 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       313893 33 +    607251 -------------------------------------------------------ATCTCATA---------A----TCC-CT---T-A-AA-G-AAA--------CTCAGATTA-----AA
i Elaphurus_davidianus.JRFZ01104969.1                    I 17 C 0
s Ellobius_lutescens.LOEQ01008920.1                          23155 43 -    110024 AA----A---AGA-GGTTCTG-------------T------------------A-GTTTCGCA---------A----CCC-AT---TCA-T--G-AAA--------CT-----TA-----AA
i Ellobius_lutescens.LOEQ01008920.1                      I 254 I 5
s Ellobius_talpinus.LOJH01081419.1                            3076 43 +      8657 AA----A---AGA-GGCTCTG-------------T------------------A-GTTTCACA---------A----CCC-AT---TCA-T--G-AAA--------CT-----TA-----AA
i Ellobius_talpinus.LOJH01081419.1                       I 255 I 5
s Eptesicus_fuscus.JH977646.1                              2149016 37 -  14770903 a-----a---a---------t-------------t------------------a-atcttaca---------acccatttttt---t---aa-a--ac--------ctc-----a-----ga
i Eptesicus_fuscus.JH977646.1                            I 16 C 0
s Erythrocebus_patas.Contig38                             21209084 40 -  21539334 AA----A---A---------T-------------T------------------A-ATCTTGCA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           13188 40 +    133382 AG----A---A---------T-------------T------------------A-ATCTCATA---------A----CAC-AT---T-A-AA-G-AAA--------TTCAGATTA-----AA
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 18 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             27134 40 -     44125 AG----A---A---------T-------------T------------------A-ATCTCATA---------A----CCC-AT---T-A-AA-G-AAA--------TTCAGATTA-----AA
i Eubalaena_japonica.EubJap_flattened_line_31514         I 18 C 0
s Felis_catus.CM001381.2                                  20238997 38 + 206538554 -a----a---a---------t-------------t------------------c-atctcACA---------A----C-C-AT---T-A-AA-G-AAG--------CTCAGATTA-----GA
i Felis_catus.CM001381.2                                 I 18 C 0
s Felis_catus_fca126.CM031415.1                           20197872 38 + 205367284 -a----a---a---------t-------------t------------------c-atctcACA---------A----C-C-AT---T-A-AA-G-AAG--------CTCAGATTA-----GA
i Felis_catus_fca126.CM031415.1                          I 18 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 11532 38 -     36744 -A----A---A---------T-------------T------------------C-ATCTCACA---------A----C-C-AT---T-A-AA-G-AAG--------CTCAGATTA-----GA
i Felis_nigripes.FelNig_flattened_line_20823             I 18 C 0
s Fukomys_damarensis.KN121974.1                             852458 35 +   3816255 aa----a---a---------t-------------t------------------a-gTCTCACA---------A----TCT-TC---A-A--ATG-AAA--------CT-----TA-----GA
i Fukomys_damarensis.KN121974.1                          I 12 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               4560 40 -      9135 aa----a---a---------T-------------T------------------A-ATCTTACA---------A----CTC-AT---T-A-AA-G-AAA--------CTCAAATTA-----AA
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     611128 33 -    660261 -------------------------------------------------------ATCTTATA---------A----TCT-GT---T-A-AA-G-TAA--------CTCAGATTA-----AA
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 17 C 0
s Glis_glis.GliGli_scaffold_19807                            33272 35 +     49224 AA----A---A---------T-------------T------------------A-GTCTCATG---------A----CCC-AT---TTA-TA---AAA--------CT-----TG-----GA
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              19926 36 -     32273 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----CCA-CT---T--------AAA--------CACAGATTA-----CA
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186342062 36 + 186649187 aa----a---a---------t-------------t------------------a-atctcACA---------A----CCA-CT---T--------AAA--------CACAGATTA-----CA
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   35280 35 +     78134 AA----A---A---------T-------------T------------------A-GTCTCACG---------A----CCC-AT---T-AATA---AAA--------CT-----TG-----CA
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               244240 38 +    327341 -A----A---A---------T-------------T------------------A-ATCTCACA---------A----C-C-AT---T-A-AA-G-AGG--------CTCAGATTA-----GA
i Helogale_parvula.HelPar_flattened_line_2585            I 18 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 21727 33 +     36099 -------------------------------------------------------ATCTTATA---------A----TCC-at---t-a-aa-g-aaa--------ctcagatta-----aa
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 17 C 0
s Heterocephalus_glaber.JH602082.1                        20664104 35 +  22651954 aa----a---c---------t-------------t------------------a-ctcTTGCA---------A----TCT-AC---G-A--ATG-AAA--------CT-----AA-----GA
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112622 40 +    128679 AG----A---A---------T-------------T------------------A-GTCTCACA---------A----TCC-AT---T-A-AA-G-AAA--------CTCAGGTTA-----AA
i Hippopotamus_amphibius.HipAmp_scaffold_9076            I 18 C 0
s Hipposideros_armiger.JXIK01000431.1                       112360 40 +   1711038 AG----A---A---------T-------------T------------------A-ATCTCACA---------A----CCC-AC---T-A-AA-C-AAA--------CTTAGACTT-----GA
i Hipposideros_armiger.JXIK01000431.1                    I 19 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188                926 40 +      9903 AA----A---A---------T-------------T------------------A-ACCTCACA---------A----CCC-AC---T-A-AA-C-AAA--------CTTAGACTT-----GA
i Hipposideros_galeritus.HipGal_scaffold_101188          I 19 C 0
s Hoolock_leuconedys.ctg274                                    438715 40 +    630532 AA----A---A---------T-------------C------------------A-ATCCCACA---------A----CCC-AT---T--------AAAGAA-A---CACGGATTA-----CA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  46980 38 +     55795 -A----A---A---------T-------------C------------------A-ATCTCATA---------A----C-C-AC---T-G-AA-C-ACG--------CTCAGATTA-----GA
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 18 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23727 36 -    143317 ------AAATA---------T-------------T------------------A-GTATCACA---------A----TCC-AC---T-A--ATG-AAA--------CT-----TA-----GA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      85032 33 +    135385 ------A---A---------T-------------T------------------A-GTCTCAAA---------A----TTC-AC---T-ACTA---AAA--------CT-----TA-----GA
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7522916 35 -   7955117 aa----a---a---------t-------------t------------------a-gtctCAAA---------A----CCC-AT---C-A--G-GCAAA--------CT-----TA-----GA
i Ictidomys_tridecemlineatus.JH393364.1                  I 13 I 5
s Inia_geoffrensis.IniGeo_flattened_line_34779                 965 40 -     31341 AG----A---A---------T-------------T------------------A-ATTTCATA---------A----CCC-AT---T-A-AA-G-AAA--------TTCAGATTA-----AA
i Inia_geoffrensis.IniGeo_flattened_line_34779           I 18 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                  711 40 -     18011 AG----A---A---------T-------------T------------------A-ATCTCATA---------A----CCC-AT---T-A-AA-G-AAA--------TTCAGATTA-----AA
i Kogia_breviceps.KogBre_flattened_line_81059            I 18 C 0
s Lagothrix_lagothricha.k141_1005387                         16337 54 -     38430 --------------------T-------------TCTTGGAAGAACAAAAATTA-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    18724 36 -     42476 A-----A---A---------T-------------A------------------A-ATCTTACA---------ACCCATTT-TT---T-A--A-A--AC--------CTC-----A-----GA
i Lasiurus_borealis.LasBor_scaffold_32767                I 15 C 0
s Lipotes_vexillifer.KE559953.1                             270020 40 -    662738 ag----a---a---------t-------------t------------------a-atttcatA---------A----CCC-at---t-a-aa-g-aaa--------ttcagatta-----aa
i Lipotes_vexillifer.KE559953.1                          I 18 C 0
s Lophocebus_aterrimus.ctg367                              1441041 40 +   1826925 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----TCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                              10853 40 +     40492 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----TCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59680107 40 +  60120075 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----TCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16624 40 -     26193 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----TCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            84400 40 -    114318 AA----A---A---------T-------------T------------------A-ATCTCACT---------A----TCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CG
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 10091 40 -     23192 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----TCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19555 40 -     29190 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----TCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  28133 40 +     37952 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----TCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186843210 40 + 187317192 aa----a---a---------t-------------t------------------a-atctcACA---------A----TCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461788 40 -  25927173 aa----a---a---------t-------------t------------------a-atctcACA---------A----TCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  83989 40 +     89720 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----TCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                10982 40 +     20474 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----TCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10779 40 -     14993 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----TCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333641 40 -    668171 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----TCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 9091 40 -     24072 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----TCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29722 40 -     45290 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----TCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92673 42 +     94391 AA----A---A---------T-------------T------------------A-ATTTCACA---------A----CCC-AT---T-A-AA-A-AAAA------TCTCAGATTA-----GC
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 16 C 0
s Mandrillus_leucophaeus.scaffold280                      23941310 40 -  24302211 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----TCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355425 40 +    752769 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----TCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              20867 10 +    737560 aa----g---a---------t-------------t------------------a-agc----------------------------------------------------------------
i Manis_javanica.JSZB01003497.1                          I 536 I 990
s Manis_pentadactyla.KN006162.1                              53012 10 -    317179 aa----g---a---------t-------------t------------------a-agc----------------------------------------------------------------
i Manis_pentadactyla.KN006162.1                          I 537 I 987
s Marmota_marmota.CZRN01000018.1                          33105207 35 -  40650429 aa----a---a---------t-------------t------------------a-gtctcaTA---------A----CTC-AT---C-A-GG-G-AAA--------CT-----TA-----GA
i Marmota_marmota.CZRN01000018.1                         I 14 I 5
s Megaderma_lyra.MegLyr_scaffold_4542                        15244 48 -    207569 CA----A---A---------T-------------T------------------A-ATCTCACA---------A----CCC-AC---T-A-AA-A-AAAAAACAACACTCAGATTA-----GA
i Megaderma_lyra.MegLyr_scaffold_4542                    I 20 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 35417 43 +    140813 AA----A---ACA-GGCTCTA-------------T------------------A-ATGTCACA---------A----CCC-AT---T---CACG-AAA--------GC-----TT-----CA
i Meriones_unguiculatus.MerUng_scaffold_7390             I 267 I 5
s Mesoplodon_bidens.MesBid_scaffold_108144                    5403 40 +     10310 AG----A---A---------T-------------T------------------A-ATCTCATA---------A----CCC-AT---T-A-AA-G-AAA--------TTCAGATTA-----AA
i Mesoplodon_bidens.MesBid_scaffold_108144               I 19 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1852222 23 +   8254450 A-----T---A---------T-------------T------------------A-ATCTTAGa---------acccatta-a----------------------------------------
i Miniopterus_natalensis.LDJU01000034.1                  I 16 I 19
s Miniopterus_schreibersii.MinSch_scaffold_18080             35906 23 +     64694 A-----T---A---------T-------------T------------------A-ATCTTAGA---------ACCCATTA-A----------------------------------------
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 16 I 19
s Miopithecus_ogouensis.k141_534055                          12990 40 -     28506 AA----A---A---------T-------------T------------------A-ATCTCGCA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    29144 40 -    437263 AG----A---A---------T-------------T------------------A-ATTTCATA---------A----CCC-AT---T-A-AA-G-AAA--------TTCAGATTA-----AA
i Monodon_monoceros.MonMon_M_scaffold_103                I 17 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   3174 33 +     82753 -------------------------------------------------------ATCTTATA---------A----TCC-AT---T-G-AA-G-AAA--------CTCAGATTA-----AA
i Moschus_moschiferus.MosMos_scaffold_13123              I 17 C 0
s Murina_feae.MurFea_scaffold_85699                           8976 36 +     14753 A-----A---A---------T-------------T------------------A-ATCTTACA---------ACCTATTT-TT---T-A--A-A--AA--------CTC-----A-----GA
i Murina_feae.MurFea_scaffold_85699                      I 16 C 0
s Mus_caroli.LT608237.1                                   84363785 43 - 120012414 AA----A---ACA-GGTTGTG-------------T------------------A-GTCTTGCA---------A----CCC-AT---TCA-T--G-AAA--------TT-----TA-----GA
i Mus_caroli.LT608237.1                                  I 244 I 5
s Mus_musculus.chr8                                       87653285 43 - 129401213 AA----A---ACA-GGTTGTG-------------T------------------A-GTCTCGCA---------A----CCC-AT---T---CACG-AAA--------TT-----TA-----GA
i Mus_musculus.chr8                                      I 244 I 5
s Mus_pahari.LT608297.1                                   31358010 43 -  89631738 AA----A---ACA-GGTAGTG-------------T------------------A-GTCTTGCA---------A----CCC-AT---T---CACG-AAA--------TT-----TA-----GA
i Mus_pahari.LT608297.1                                  I 257 I 5
s Mus_spretus.CM004101.1                                  90755774 43 - 130317789 aa----a---a-caggTTGTG-------------T------------------A-GTCTCGCA---------A----CCC-AT---T---CACG-AAA--------TT-----TA-----GA
i Mus_spretus.CM004101.1                                 I 244 I 5
s Muscardinus_avellanarius.MusAve_scaffold_82313              6761 38 +     14296 AA----A---A---------T-------------T------------------A-GTCTCATG---------A----CTA-ATTTTT-AATA---AAA--------CT-----TA-----AA
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     73384 39 -     80779 AACAAAA---A---------T-------------T------------------A-ACATCATA---------A----TCC-AC---T-A--ATG-AAA--------CT-----TA-----GA
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                282722 36 -  10118263 a-----a---a---------t-------------t------------------a-atcttaca---------acccattt-tt---t---aa-a--aa--------ctc-----a-----ga
i Myotis_brandtii.KE162005.1                             I 16 C 0
s Myotis_davidii.KB100139.1                                1590041 35 -   6019432 a-----a---a---------t-------------t------------------a-atcttaca---------acccattt--t---t---aa-a--aa--------ctc-----a-----ga
i Myotis_davidii.KB100139.1                              I 16 C 0
s Myotis_lucifugus.GL429869.1                              3906152 36 -   4330536 A-----A---A---------T-------------T------------------A-ATCTTaca---------acccattt-tt---t---aa-a--aa--------ctc-----a-----ga
i Myotis_lucifugus.GL429869.1                            I 16 C 0
s Myotis_myotis.MyoMyo_scaffold_44643                          454 36 +     25416 A-----A---A---------A-------------T------------------A-ATCTTACA---------ACCCATTT-TT---T-A--A-A--AA--------CTC-----A-----GA
i Myotis_myotis.MyoMyo_scaffold_44643                    I 16 C 0
s Nannospalax_galili.KL204047.1                            2038877 33 -   3037898 aa----a---a---------g-------------t------------------a-tcctcATT---------A----CCC-AT---G---TA---AAA--------CT-----TA-----GG
i Nannospalax_galili.KL204047.1                          I 257 I 52
s Nasalis_larvatus.k141_413338                               19040 40 +     21681 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5868107 40 +   7148211 ag----a---a---------t-------------t------------------a-atttcatA---------A----CCC-AT---T-A-AA-G-AAA--------TTCAGATTA-----AA
i Neophocaena_asiaeorientalis.KZ687982.1                 I 17 C 0
s Ochotona_princeps.JH802162.1                             1366890 40 +   3988456 aa----a---a---------c-------------t------------------a-gtCTTATA---------A----CCC-CA---T-A-AA-G-AGT--------TT-----TGGATTAGA
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  749693 16 +  11899542 tacaaca---a---------t-------------c------------------a-aattc--------------------------------------------------------------
i Octodon_degus.JH651603.1                               C 0 I 190
s Odocoileus_virginianus.KZ100018.1                         146695 33 +    630418 -------------------------------------------------------ATCTCATA---------A----TCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----AA
i Odocoileus_virginianus.KZ100018.1                      I 17 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          79032 33 -    150152 -------------------------------------------------------ATCTTATA---------A----TCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----AA
i Okapia_johnstoni.LVCL01S0005463.1                      I 17 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                      247 45 +    140218 aa----a-caaAA-GGTTCTG-------------T------------------A-GTTTCACA---------A----CCC-AT---T-C-CT-G-AAA--------CT-----TA-----AA
i Ondatra_zibethicus.OndZib_scaffold_7387                N 0 I 5
s Onychomys_torridus.OnyTor_scaffold_2986                    83204 44 +    102263 AA----A---ACAAG-TTCTG-------------T------------------CCTTTTTGCA---------G----TCC-AT---A---TATG-AAA--------CT-----TA-----GA
i Onychomys_torridus.OnyTor_scaffold_2986                I 246 I 5
s Orcinus_orca.KB316932.1                                  2784000 40 -  10937097 ag----a---a---------t-------------t------------------a-atttcatA---------A----CCC-at---t-a-aa-g-aaa--------ttcagatta-----aa
i Orcinus_orca.KB316932.1                                I 17 C 0
s Ovis_aries.CM001607.2                                   17589478 33 +  44047080 -------------------------------------------------------ATCTTATA---------A----TCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----AA
i Ovis_aries.CM001607.2                                  I 17 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      177680 33 -    191736 -------------------------------------------------------ATCTTATA---------A----TCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----AA
i Ovis_canadensis.OviCan_scaffold_2572                   I 17 C 0
s Pan_paniscus.KQ411613.1                                    48027 36 +     80009 aa----a---a---------t-------------t------------------a-atctcACA---------A----CCA-CT---T--------AAA--------CATAGATTA-----CA
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146885 36 + 189151597 aa----a---a---------t-------------t------------------a-atttcaca---------a----CCA-CT---T--------AAA--------CACAGATTA-----CA
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  153067 38 +    230217 -A----A---A---------T-------------T------------------C-ATCTCACA---------A----C-C-AT---T-A-AA-G-AAG--------CTCAGATTA-----GA
i Panthera_onca.PanOnc_flattened_line_3271               I 18 C 0
s Panthera_pardus.KV860321.1                                266378 38 +  18783137 -a----a---a---------t-------------t------------------c-atctcACA---------A----C-C-AT---T-A-AA-G-AAG--------CTCAGATTA-----GA
i Panthera_pardus.KV860321.1                             I 18 C 0
s Panthera_tigris.KE722367.1                               4723204 38 -   8748460 -a----a---a---------t-------------t------------------c-atctcACA---------A----C-C-AT---T-A-AA-G-AAG--------CTCAGATTA-----GA
i Panthera_tigris.KE722367.1                             I 18 C 0
s Pantholops_hodgsonii.KE114653.1                          1268413 33 -   2937107 -------------------------------------------------------ATCTTATA---------A----TCC-at---t-a-aa-g-aaa--------ctcagatta-----aa
i Pantholops_hodgsonii.KE114653.1                        I 17 C 0
s Papio_anubis.CM001495.2                                183447114 40 + 183742232 aa----a---a---------t-------------t------------------a-atctcACA---------A----TCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10764 40 +     20448 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----TCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567572 40 +  20919399 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----TCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   9504 40 +     41871 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----TCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12797 40 +     27711 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----TCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3796 40 -     11374 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----TCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14513 38 -     78924 -A----A---A---------T-------------T------------------A-ATCTCACA---------A----C-C-CT---T-A-AA-G-AAG--------CTCAGATTA-----AA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 18 C 0
s Peromyscus_maniculatus.KI615324.1                       18197941 43 -  18517816 AA----A---ACAAG-TTCTG-------------T------------------C-TTTTTGTA---------G----TCC-AT---TCA-T--G-AAA--------CT-----TA-----GA
i Peromyscus_maniculatus.KI615324.1                      I 246 I 5
s Petromus_typicus.PetTyp_scaffold_231924                      830 21 -      1962 AA----A---A---------T-------------T------------------A-GTCTCACT---------A----TCT-AC---------------------------------------
i Petromus_typicus.PetTyp_scaffold_231924                n 21 I 159
s Phocoena_phocoena.PhoPho_flattened_line_24159              11069 40 +     63832 AG----A---A---------T-------------T------------------A-ATTTCATA---------A----CCC-AT---T-A-AA-G-AAA--------TTCAGATTA-----AA
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 17 C 0
s Piliocolobus_badius.k141_1142974                            2118 40 +     68526 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        42263 40 +     89929 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43677 40 +     51399 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299914 40 -  14605196 aa----a---a---------t-------------t------------------a-atctcACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3790 35 +     22620 A-----A---A---------T-------------T------------------A-ATCTTACA---------ACCCATT--TT---T-A--A-G--AC--------CTC-----A-----GA
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 16 C 0
s Pithecia_albicans.k141_1476471                              5563 40 +     26961 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1692 39 +     23417 -A----A---A---------T-------------T------------------A-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                5555 40 +     29694 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          30581 40 +     52772 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----CCC-AT---T-A-AA-G-TAA--------CTCAGATTA-----CA
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           5577 40 +     26198 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----CCC-AT---T-A-AA-G-TAA--------CTCAGATTA-----CA
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3942109 39 +   4542175 -A----A---A---------T-------------T------------------A-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            5541 40 -     23490 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----CCC-AT---T-A-AA-G-TAA--------CTCAGATTA-----CA
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610            375 40 +      7680 ag----a---a---------t-------------t------------------a-atctcata---------a----ccc-at---t-a-aa-g-aaa--------ttcagatta-----aa
i Platanista_gangetica.PlaMin_flattened_line_173610      I 18 C 0
s Plecturocebus_bernhardi.k141_2549090                        9793 40 -     39866 AA----C---A---------T-------------T------------------A-ATATCACA---------A----CCG-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18959 40 +     34906 AA----C---A---------T-------------T------------------A-ATATCACA---------A----CCG-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       23221 40 +     87950 AA----C---A---------T-------------T------------------A-ATATCACA---------A----CCG-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     24050 40 +     88961 AA----C---A---------T-------------T------------------A-ATATCACA---------A----CCG-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9718 40 +     39403 AA----C---A---------T-------------T------------------A-ATATCACA---------A----CCG-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          23502 40 -     87928 AA----C---A---------T-------------T------------------A-GTATCACA---------A----CCG-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         30461 40 +     60166 AA----C---A---------T-------------T------------------A-ATATCACA---------A----CCG-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30658 40 +     67232 AA----C---A---------T-------------T------------------A-ATATCACA---------A----CCG-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          26131 40 +     90634 AA----C---A---------T-------------T------------------A-ATATCACA---------A----CCG-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          23503 40 -     89403 AA----C---A---------T-------------T------------------A-ATATCACA---------A----CCG-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189135029 40 + 189387572 aa----a---a---------t-------------t------------------a-atctcACA---------A----CCC-CT---T-A-AA-G-AAA--------CACAGATTA-----CA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9574639 40 +   9816681 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----CCC-CT---T-A-AA-G-AAA--------CACAGATTA-----CA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               77217 40 -     81375 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              9034 40 +     19060 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            13051 43 -     21651 AA----A---ACA-GGCTCTG-------------T------------------A-ATGTCACA---------A----CCC-GT---TCA-T--G-AAA--------GT-----TG-----TA
i Psammomys_obesus.NESX01036370.1                        I 259 I 5
s Pteropus_alecto.KB030862.1                              22978761 40 +  28871421 aa----a---t---------t-------------t------------------a-atctCATG---------A----CCC-AT---T-A-AA-A-AAA--------CTCAGATTA-----GC
i Pteropus_alecto.KB030862.1                             I 18 C 0
s Pteropus_vampyrus.KN525825.1                             1361762 40 +   4952924 aa----a---t---------t-------------t------------------a-atctcATG---------A----CCC-AT---T-A-AA-A-AAA--------CTCAGATTA-----GC
i Pteropus_vampyrus.KN525825.1                           I 14 C 0
s Puma_concolor.QAVW01001104.1                            20276267 38 -  38429054 -a----a---a---------t-------------t------------------c-atctcACA---------A----C-C-AT---T-A-TA-G-AAG--------CTCAGATTA-----GA
i Puma_concolor.QAVW01001104.1                           I 18 C 0
s Pygathrix_cinerea.k141_1153803                             19027 40 -     91421 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7613150 40 +   7812017 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             19057 40 -     72585 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  8530 33 +     55207 -------------------------------------------------------ATCTCATA---------A----TCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----AA
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 17 C 0
s Rattus_norvegicus.chr16                                 53573286 42 +  90668790 AA----A---ACA-GGTTGTG-------------T------------------A-ATGT-GCA---------A----CCC-AT---TCA-T--G-AAA--------TT-----TT-----CA
i Rattus_norvegicus.chr16                                I 246 I 99
s Rhinolophus_sinicus.LVEH01000134.1                        368813 38 -   3329780 aa----a---a---------t-------------t------------------a-atgtcacA---------A----CCC-AC---T-A-AA-C-AAA--------CTTAGAGTG-------
i Rhinolophus_sinicus.LVEH01000134.1                     I 20 C 0
s Rhinopithecus_bieti.k119_217274                            10724 40 -     11128 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91240092 40 - 195417433 aa----a---a---------t-------------t------------------a-atctcACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675739 40 +   7961872 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89834 19 -     96226 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----CTC------------------------------------------
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 20 I 19
s Saiga_tatarica.SaiTat_scaffold_133311                       1012 33 +      9503 -------------------------------------------------------ATCCTATA---------A----TCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----AA
i Saiga_tatarica.SaiTat_scaffold_133311                  I 17 C 0
s Semnopithecus_entellus.k141_1672505                         3898 40 -     12572 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30750 40 +     39453 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           11258 40 +     27826 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10799 40 -     19483 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      4097 40 -     12762 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3942 40 +     13763 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----CGC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     2955 44 -     30804 AA----A---AAATGGTTCTG-------------T------------------C-ATTTTGCA---------A----TCC-AT---TCA-T--G-AAA--------CT-----TA-----GA
i Sigmodon_hispidus.SigHis_scaffold_42075                I 250 I 5
s Spermophilus_dauricus.KZ294078.1                         1956073 35 -   3870691 aa----a---a---------t-------------t------------------a-gtcTCATA---------A----CCC-AT---C-A--G-GCAAA--------CT-----TA-----GA
i Spermophilus_dauricus.KZ294078.1                       I 13 I 5
s Suricata_suricatta.SurSur_flattened_line_6629              20500 38 -    196729 -A----A---A---------T-------------T------------------A-ATCTCACA---------A----C-C-AT---T-A-AA-G-GAG--------CTCAGATTA-----GA
i Suricata_suricatta.SurSur_flattened_line_6629          I 16 C 0
s Sus_scrofa.CM000828.4                                    6813646 33 +  69701581 ag----a---a---------t-------------t------------------a-atctCACA---------A----TCT-AT---T-A-AA-G-AAA---------------CA-----AA
i Sus_scrofa.CM000828.4                                  I 16 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                13170 41 +     41958 A-----A---A---------T-------------T------------------A-ATCTTACA---------ATCTATTT-TT---T---TA-A--AA--------CTCATATTA-----GA
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 16 C 0
s Tarsius_lariang.k141_2201908                               27694 40 +     70052 AA----A---A---------T-------------T------------------A-GTCTCACA---------A----CCC-TT---T-A-AA-G-AAA--------CTCAGATTA-----GA
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                2491 40 -     16117 AA----A---A---------T-------------T------------------A-GTCTCACA---------A----CCC-TT---T-A-AA-G-AAA--------CTCAGATTA-----GA
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186432422 40 + 186847797 aa----a---a---------t-------------t------------------a-atctcACA---------A----TCC-AT---T-A-AA-G-AAG--------CTCAGATTA-----CA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              107504 21 +    114563 AA----A---A---------C-------------T------------------A-ATTTCCCT---------A----TCT-AC---------------------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Trachypithecus_auratus.k141_722599                         14836 40 -     20410 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3959 40 -     12674 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14944 40 +     19930 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      11346 40 -     19997 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            51487 40 -     60166 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18950 40 -     27529 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                        582 40 +      9229 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          12484 40 -     21137 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                     584 40 +      9131 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                          548 40 -      3730 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28816 40 +     32220 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942913 40 +   6242583 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       12165 40 +     20839 AA----A---A---------T-------------T------------------A-ATCTCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----CA
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    2426 33 +     27266 -------------------------------------------------------ATCTTACA---------A----GCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----AA
i Tragulus_javanicus.TraJav_scaffold_40725               I 17 C 0
s Tupaia_chinensis.KB320699.1                              2158331 40 +   4065304 ca----a---a---------t-------------t------------------a-atctCACA---------A----CTC-AC---T-A-AA-G-AAA--------TTCAGATTG-----AA
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_306982                     751 40 -      4186 CA----A---A---------T-------------T------------------A-ATCTCACA---------A----CCC-AC---T-A-AA-G-AAA--------TTCAGATTA-----AA
i Tupaia_tana.TupTan_flattened_line_306982               C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15740253 40 +  33153633 ag----a---a---------t-------------t------------------a-atttcatA---------A----CCC-AT---T-A-AA-G-AAA--------TTCAGATTA-----AA
i Tursiops_truncatus.MRVK01000835.1                      I 17 C 0
s Vicugna_pacos.KN270157.1                                 5373919 40 -   5488506 ag----a---a---------t-------------t------------------a-atctCACA---------A----CCC-AT---T-A-AA-G-AAA--------CTCAGATTA-----AA
i Vicugna_pacos.KN270157.1                               I 19 C 0
s Xerus_inauris.XerIna_scaffold_2302                          3090 35 +    224448 AA----A---A---------T-------------T------------------A-GTCTTATA---------A----CCC-AT---C-A--G-GTAAA--------CT-----TA-----GA
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 5
s Zapus_hudsonius.ZapHud_scaffold_11398                      16632 36 +     63895 AA-A--A---A---------A-------------T------------------A-CTCTCACA---------A----CTC-AT---G-T-TT-G-AAG--------CT-----TA-----AA
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 5
s Ziphius_cavirostris.ZipCav_flattened_line_761354             558 40 -      1267 AG----A---A---------T-------------T------------------A-ATCTCATA---------A----CCC-AT---T-A-AA-T-AAA--------TTCAGATTA-----AA
i Ziphius_cavirostris.ZipCav_flattened_line_761354       I 19 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 12841 537 -     43706 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Uropsilus_gracilis.UroGra_scaffold_12083                   54925 394 -     77625 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tonatia_saurophila.TonSau_scaffold_294                     83098  2 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_85600                    4490  2 +     18632 I
e Tapirus_terrestris.TapTer_scaffold_755                    389823 643 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      121344 643 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Sorex_araneus.JH798187.1                                13652641 429 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    154809 432 -    313613 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Pteronotus_parnellii.KE909381.1                            16825  2 -     21811 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Otocyon_megalotis.JAEUCK010005147.1                       464401 867 -    559221 I
e Oryctolagus_cuniculus.CM000791.1                        67149665 1414 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9151314 530 -   9404916 I
e Noctilio_leporinus.NocLep_scaffold_251                    759530  2 +    783361 I
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 143344  2 -    366855 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                17753  2 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184611 154 -  29670104 I
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Lycaon_pictus.CM007581.1                                17957377 535 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     8427 743 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Jaculus_jaculus.JH725527.1                               8278673 121 -   9596543 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               35993 651 +    498745 I
e Equus_caballus.CM000403.2                               18533964 651 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1286155 651 +   4378816 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    8624 649 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  675871 642 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8632007  2 +  20541912 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            69437  2 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Crocidura_indochinensis.CroInd_scaffold_239572              3398  0 -      5012 I
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Condylura_cristata.JH655891.1                           17549953 974 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            6415  2 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5047 647 -     25243 I
e Carollia_perspicillata.CarPer_scaffold_92756                7006  2 -     11696 I
e Canis_lupus_orion.HG994398.1                            18502439 535 +  63665305 I
e Canis_lupus_familiaris.chr16                            17961137 535 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9036666 537 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     1966 535 -     43241 I
e CanFam4.chr16                                           17801223 537 -  60362399 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6662  2 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Anoura_caudifer.AnoCau_scaffold_1412                      187255  2 +    412891 I
e Allactaga_bullata.AllBul_scaffold_9566                     75924 121 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T

a score=0.000000
s hg38.chrUn_KI270753v1                                      10717 35 +     62944 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGAGTGC
s Acinonyx_jubatus.LLWD01001279.1                           829291 35 -   1699592 GTACATTTCGAAATACTT----------ACCAAA--TTATTGAATGC
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     73441 34 +     87051 ACATATT-TTAACTCCCA----------ATA--AAATTATAGAGTAC
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 5 C 0
s Allenopithecus_nigroviridis.k141_3361533                   18582 35 -     52922 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGGGTGC
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         18519 35 -     28001 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTAGGTGC
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          9014 35 -     18505 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTAGGTGC
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9867 35 -     12518 GCAAATTTTGAAATGCCT----------CTCAAA--TTGTTGGGTGC
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             10323 34 +     51355 GCAGATTTTGAAATGCCT----------CTCAA---TTATTGAGTGC
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                3430 34 -     36483 GCAGATTTTGAAATGCCT----------CTCAA---TTATTGAGTGC
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13883 34 +     28687 GCAGATTTTGAAATGCCT----------CCCAA---TTATTGAGTGC
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 2355 34 +     27940 GCAGATTTTGAAATGCCT----------CTCAA---TTATTGAGTGC
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            3434 34 -      9457 GCAGATTTTGAAATGCCT----------CTCAA---TTATTGAGTGC
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             2392 34 +     30492 GCAGATTTTGAAATGCCT----------CTCAA---TTATTGAGTGC
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              6387 34 +     47717 GCAGATTTTGAAATGCCT----------CTCAA---TTATTGAGTGC
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              3123 34 +      5663 GCAGGTTTTGAAATGCCT----------CTCAA---TTATTGAGTGC
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             17574 34 +     50774 GCAGATTTTGAAATGCCT----------CTCAA---TTATTGAGTGC
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          679445 35 -   2318259 GCACATTTTGAAATGCCT----------ATCAAA--TTACTGAGTGG
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 3
s Antilocapra_americana.AntAmePen_scaffold_43303               496 35 -     32520 GCACATGTTGACATGCCT----------ATCAGA--TTACTGAGTGA
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 I 237
s Aplodontia_rufa.AprRuf_scaffold_68852                      14641 35 +     20879 CAACATTTTCAAATGTCT----------ATC--AAATGATTGGGTAT
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 5 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21210587 35 -  21539123 GCAGATTTTGAAATGCCT----------CTCAAA--TTACTGAGTGC
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               45383 35 -     48001 GCAGATTTTGAAATGCCT----------CTCAAA--TTACTGAGTGC
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 28187 35 -     30947 GCAGATTTTGAAATGCCT----------CTCAAA--TTACTGAGTGC
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9959 35 -     89868 GCAGATTTTGAAATGCCT----------CTCAAA--TTACTGAGTGC
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              14343 35 -     40414 GCAGATTTTGAAATGCCT----------CTCAAA--TTACTGAGTGC
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                22232 35 +     72325 GCAGATTTTGAAATGCCT----------CTCAAA--TTACTGAGTGC
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193916 31 +  23207421 GCACATCT-GA---GTTT----------ATCAAA--CAATTGagtgg
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         4381 31 -     18090 GCACATCT-GA---GTTT----------ATCAAA--CAATTGagtgg
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    30541 35 +     34529 GCACATTTTGAAATACCT----------ATCAAA--TTGCTGAGTGG
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 3
s Bison_bison.KN261452.1                                    203153 35 -    288883 GCACATTTTGAAATGCCT----------ATCAAA--TTACTGAGTGC
i Bison_bison.KN261452.1                                 C 0 I 3
s Bos_indicus.CM003047.1                                  20276392 35 +  48749331 GCACATTTTGAAATGCCT----------ATCAAA--TTACTGAGTGC
i Bos_indicus.CM003047.1                                 C 0 I 3
s Bos_mutus.JH880303.1                                     1128946 35 -   1948126 GCACATTTTGAAATGCCT----------ATCAAA--TTACTGAGTGC
i Bos_mutus.JH880303.1                                   C 0 I 3
s Bos_taurus.CM000203.6                                   18087030 35 +  45695690 GCACATTTTGAAATGCCT----------ATCAAA--TTACTgagtgc
i Bos_taurus.CM000203.6                                  C 0 I 3
s Bubalus_bubalis.KI419123.1                               2822983 35 +   4408762 GCACATTTTGAAATGCCT----------ATCAAA--TTACTgagtgc
i Bubalus_bubalis.KI419123.1                             C 0 I 3
s Cacajao_ayresi.k141_552049                                103203 35 -    122966 GCAGATTTTCAAATGCCT----------CTCAAA--TTATTGAGTGC
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   62706 35 +     81800 GCAGATTTTCAAATGCCT----------CTCAAA--TTATTGAGTGC
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31888 35 -     95584 GCAGATTTTCAAATGCCT----------CTCAAA--TTATTGAGTGC
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         55989 35 -    119600 GCAGATTTTCAAATGCCT----------CTCAAA--TTATTGAGTGC
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10004437 29 -  17673402 GCATATTTTGTAATGCCT----------AAcaaa--ttg------ag
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2336909 29 -   7040546 GCATATTTTGTAATGCCT----------AAcaaa--ttg------ag
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  405207 29 -   1652518 GCATATTTTGTAATGCCT----------AAcaaa--ttg------ag
i Camelus_ferus.KB017975.1                               C 0 C 0
s Capra_aegagrus.CM003241.1                               18833455 35 +  46296322 GCACATTTTGAAATGCCT----------ATCAAA--TTACTgagtgg
i Capra_aegagrus.CM003241.1                              C 0 I 3
s Capra_hircus.CM004588.1                                 18064272 35 -  44709034 GCACATTTTGAAATGCCT----------ATCAAA--TTACTgagtgg
i Capra_hircus.CM004588.1                                C 0 I 3
s Capromys_pilorides.CapPil_scaffold_65020                    3234 19 -     12242 ACACAATTTTAAGTGTCG----------A------------------
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           157237 35 -    496798 GCACATTTTGAAATGCCT----------ATTAAA--TTCTCAAATGC
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    139190 35 +    179628 GTACATTTTTAAAAACCT----------ATG--AAATTATTGCATGC
i Castor_canadensis.CasCan_scaffold_2074                 I 5 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     96092 35 +    217609 GCACATTTTGAAGTACCT----------ATGAAA--TTGTTAAGGGT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 1
s Cavia_aperea.AVPZ01000300.1                             18351787 19 -  23392119 NNNNNNNNNNNNNNNNNN----------N------------------
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18364047 19 -  23407841 GTACATTGTTAAgtgtta----------a------------------
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                       102929 19 +    143979 GTACATTGTTAAGTGTTA----------A------------------
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         6735 35 +     31688 GCACATTTTGAAATGCCT----------ATTAAA--TTCTCAAATGC
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4479538 35 +   4669795 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGAGTGC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        4035 35 +     17872 GCAAATTTTGAAATGACT----------CTCAAA--TTATTGAGTGC
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4630 35 -     14043 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGAGTGC
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12725 35 +     27781 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGAGTGC
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12879 35 -     20310 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGGGTGT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15855 35 +     29689 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGGGTGC
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10615 35 -     20078 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGGGTGC
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          18526 35 -     27936 GCAAATTTTGAAATGCCT----------CTCAAA--TTACTGGGTGC
i Cercopithecus_hamlyni.k141_187466                      I 14 C 0
s Cercopithecus_lowei.k141_1854285                            7401 35 -     17152 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGGGTGC
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38827125 35 +  39242232 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGGGTGC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226633 35 -  21565898 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGGGTGC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43752 35 -     53127 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGGGTGC
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        4002 35 +     13442 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGGGTGC
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       18548 35 -     27947 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGGGTGC
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1573 35 +     10558 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGGGTGC
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4582 35 +     14005 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGGGTGC
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1812 35 -     17098 GCAGATTTTGAAATGCCT----------CTCAAA--TTATTGAGTGC
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1688 35 +     17877 GCAGATTTTGAAATGCCT----------CTCAAA--TTATTGAGTGC
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            159255 35 -    216457 GCAGATTTTGAAATGCCT----------CTCAAA--TTATTGAGTGC
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63726 35 +     76511 GCAGATTTTGAAATGCCT----------CTCAAA--TTATTGAGTGC
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254883 19 +   2543920 GCACATTTTTAAgtgtca----------a------------------
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_israelita.k141_747660                          100332 35 +    146308 GCAGATTTTGAAATGCCT----------CTCAAA--TTATTGAGTGC
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          32139 35 -     50570 GCAGATTTTGAAATGCCT----------CTCAAA--TTATTGAGTGC
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18432452 35 -  18827391 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTAGGTGC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18949 35 -     50209 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTAGGTGC
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425953 35 + 135778131 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTAGGTGC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1914454 35 +   2368649 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGAGTGC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952702 35 + 200372422 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGAGTGC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              40975 35 +     84244 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGAGTGC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           2342 35 +     23735 GCACATTTTGAGATGCCT----------ATAAAA--TTATTGAGTGG
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 52708 34 +     63868 ACACATT-TCAAATTTCC----------ATA--AAACTATAGACTGC
i Cricetomys_gambianus.CriGam_scaffold_18520             I 5 I 5
s Cryptoprocta_ferox.CryFer_flattened_line_16129             30469 35 -     87169 GTACATTTTGAAATACCT----------ATCAAA--TTATTGAATGC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  38163 19 +     51376 ATTCATTTTTAAGTGTCA----------A------------------
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900             1992 19 -     75252 GCACATTTTTAAGGGTTA----------A------------------
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16813799 31 +  35494412 GCACATTT-GA---GTTT----------ATCAAA--CTATTGAGTgg
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    38365 19 +     67921 GCACATTTTCAATTGTCA----------A------------------
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 35507 19 -     42551 GTACATTGTTAAGTGTCA----------A------------------
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.AWHC01278734.1                                553 35 +      2334 GCACATTTTGAAATACCT----------ACCAAA--TTATTGAGcga
i Eidolon_helvum.AWHC01278734.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       313926 35 +    607251 GCACATTTTGAAATGCCT----------ATCAAA--TTACTgagtgg
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 3
s Ellobius_lutescens.LOEQ01008920.1                          23203 34 -    110024 ACACGTT-TTAACTTCCC----------ATG--AGATTACAGATTGC
i Ellobius_lutescens.LOEQ01008920.1                      I 5 C 0
s Ellobius_talpinus.LOJH01081419.1                            3124 34 +      8657 ACATGTT-TTAAATTCCC----------ATG--AGATTACAGATTGC
i Ellobius_talpinus.LOJH01081419.1                       I 5 C 0
s Eptesicus_fuscus.JH977646.1                              2149053 34 -  14770903 gC-TATTTTGAAATGCTT----------ATTAAA--TTATTGAGTGG
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Erythrocebus_patas.Contig38                             21209124 35 -  21539334 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTAGGTGC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           13228 31 +    133382 GCACATCT-GA---GTTT----------ATCAAA--CTATTGAGTGG
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             27174 31 -     44125 GCACATCT-GA---GTTT----------ATCAAA--CTATTGAGTGG
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20239035 35 + 206538554 GTACATTTCGAAATACTT----------ACCAAA--TTATTGAATGC
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20197910 35 + 205367284 GTACATTTCGAAATACTT----------ACCAAA--TTATTGAATGC
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 11570 35 -     36744 GTACATTTCGAAATACTT----------ACCAAA--TTATTGAATGC
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             852493 19 +   3816255 GCACATTTGTAAGtgtca----------a------------------
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               4600 35 -      9135 GCACATTTTGAAATGTCT----------ATCAAA--TTATTGAGTGC
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     611161 35 -    660261 GCACATTGTGAAATGCCT----------ATCAAA--TTACTGAGTGA
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 I 3
s Glis_glis.GliGli_scaffold_19807                            33307 35 +     49224 GCACATTTTTAAATGCCT----------ATC--AAATTATTGAATGC
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              19962 35 -     32273 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGAGTGC
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186342098 35 + 186649187 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGAGTGC
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   35315 35 +     78134 GCACATTTTTAAATGCCT----------ATC--AAGTTATTGAGTGC
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               244278 35 +    327341 GTACATTTTGAAATACTT----------AATGAA--TTATTGAATGC
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 21760 35 +     36099 gcacattttgaaatgcct----------atcaaa--ttactgggtgg
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 I 3
s Heterocephalus_glaber.JH602082.1                        20664139 19 +  22651954 GCACATTTTTAAgtgtca----------a------------------
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112662 31 +    128679 GCACATTTTGAAATATCT----------ATCAAA--T----CAGTGG
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       112400 35 +   1711038 GCACATTTTGAACTACCT----------CCCAAA--TTATTGAGTGa
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188                966 35 +      9903 GCACATTTTGAACTGCCT----------CTCAAA--TTATTGAGTGA
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 C 0
s Hoolock_leuconedys.ctg274                                    438755 35 +    630532 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGAGTGC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  47018 35 +     55795 GTACATTTTGAAATACTT----------ACCAAA--TTACTGAATGC
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23763 19 -    143317 GTACATTGTTAAGTGTCA----------A------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      85065 19 +    135385 GTGTATTTTTAAGCATCA----------A------------------
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7522956 35 -   7955117 gtacatttttaaatatct----------atc--aaATTATTGAGTGT
i Ictidomys_tridecemlineatus.JH393364.1                  I 5 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                1005 31 -     31341 GCACATTT-GA---GTTT----------ATCAAA--CTACTGAGTGG
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                  751 31 -     18011 GCACATTT-GA---GTTT----------ATTAAA--CTATTGAGTGG
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         16391 35 -     38430 GCAGATTTGGAAATGGCT----------CTCAAA--TGATTGAGTGC
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    18760 34 -     42476 AC-TATTTTGAAATGCTT----------ATTCAA--TTATTGAGTGG
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             270060 31 -    662738 gcacattt-ga---gttt----------atcaaa--ctattgagtag
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1441081 35 +   1826925 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGAGTGC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                              10893 35 +     40492 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGAGTGC
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59680147 35 +  60120075 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGAGTGC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16664 35 -     26193 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGAGTGC
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            84440 35 -    114318 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGAGTGC
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 10131 35 -     23192 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGAGTGC
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19595 35 -     29190 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGAGTGC
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  28173 35 +     37952 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGAGTGC
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186843250 35 + 187317192 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGAGTGC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461828 35 -  25927173 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGAGTGC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  84029 35 +     89720 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGAGTGC
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                11022 35 +     20474 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGAGTGC
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10819 35 -     14993 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGAGTGC
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333681 35 -    668171 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGAGTGC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 9131 35 -     24072 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGAGTGC
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29762 35 -     45290 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGAGTGC
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92715 32 +     94391 ACAAATTTTGAAATACCT----------ACCAAA--CT---GTGTGA
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23941350 35 -  24302211 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGAGTGC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355465 35 +    752769 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGAGTGC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33105247 35 -  40650429 gcacatttttaaatatct----------atc--aaATTATTGAGTGT
i Marmota_marmota.CZRN01000018.1                         I 5 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        15292 35 -    207569 GCACATTTTGAAATGCCT----------ATCAAA--TTATTGAGTGG
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 35465 34 +    140813 ACACATT-TTAAATTACC----------ATA--AAATTATGGAGTGC
i Meriones_unguiculatus.MerUng_scaffold_7390             I 5 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    5443 31 +     10310 GCACATTT-GA---GTTT----------ATCAAA--CTATTGAGTGG
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1852264 34 +   8254450 GC-TATTTTGAAATGCCT----------ATTAAA--TTTTTGAGTGG
i Miniopterus_natalensis.LDJU01000034.1                  I 19 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             35948 34 +     64694 GC-TATTTTGAAATGCCT----------ATTAAA--TTTTTGAGTGG
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 19 C 0
s Miopithecus_ogouensis.k141_534055                          13030 35 -     28506 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGGGTGC
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    29184 31 -    437263 GCACATTT-GA---GTTT----------ATCAAA--CTATTGAGTGG
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   3207 35 +     82753 GCACATTTTGAAGTGCCT----------GTCAAA--TTACTGAGTGG
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 3
s Murina_feae.MurFea_scaffold_85699                           9012 34 +     14753 GC-TATTCTGAAATGCTT----------ATTAAA--TTATTGAGTGG
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84363833 34 - 120012414 ACACATT-TTAAATTCCC----------ATA--AAATTATAGAGTGC
i Mus_caroli.LT608237.1                                  I 5 C 0
s Mus_musculus.chr8                                       87653333 34 - 129401213 ACACATT-TTAAATTCCC----------ATA--AAATTATAGAGTGC
i Mus_musculus.chr8                                      I 5 C 0
s Mus_pahari.LT608297.1                                   31358058 34 -  89631738 ACACATT-TTAAATTGCC----------ATG--AAGTTATAGGGTGC
i Mus_pahari.LT608297.1                                  I 5 C 0
s Mus_spretus.CM004101.1                                  90755822 34 - 130317789 ACACATT-TTAAATTCCC----------ATA--AAATTATAGAGTGC
i Mus_spretus.CM004101.1                                 I 5 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              6799 33 +     14296 GCACTTTTTAAAATGCCT----------ACC--AAGGTA--GAGTGC
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     73423 16 -     80779 ACACATTTT---GTGTCA----------A------------------
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                282758 34 -  10118263 gc-TATTTTGAAATGCTT----------ATTAAA--TTATTGAGTGG
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1590076 34 -   6019432 gc-TATTTTGAAATGCTT----------ATTAAA--TTATTGAGTGg
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3906188 34 -   4330536 gc-TATTTTGAAATGCTT----------ATTAAA--TTATTGAGTGg
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_44643                          490 34 +     25416 GC-TATTTTGAAATGCTT----------TTTAAA--TTATTGAGTGG
i Myotis_myotis.MyoMyo_scaffold_44643                    C 0 C 0
s Nannospalax_galili.KL204518.1                            3931175 35 -   9623020 ACATATTTTTAAACTCCC----------ATA--AGATTATGGCATTC
i Nannospalax_galili.KL204518.1                          I 254 C 0
s Nasalis_larvatus.k141_413338                               19080 35 +     21681 GCAAATCTTGAAATGCCT----------CTCAAA--TTATTGAGTGT
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5868147 31 +   7148211 GCACATTT-GA---GTTT----------ATCAAA--CTATTGAGTGG
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Ochotona_princeps.JH802162.1                             1366930 33 +   3988456 GCACATTTTGAGAGCTCT----------ATC--A--TTATTTAGGGC
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  749899 29 +  11899542 actctctttcaagtatgatggagaagtga------------------
i Octodon_degus.JH651603.1                               I 190 C 0
s Odocoileus_virginianus.KZ100018.1                         146728 35 +    630418 GCATATTTTGAAATGCCT----------ATCAAA--TTACTgagtgg
i Odocoileus_virginianus.KZ100018.1                      C 0 I 3
s Okapia_johnstoni.LVCL01S0005463.1                          79065 17 -    150152 GC----------------------------CAAA--TTACTGAGTGA
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                      297 34 +    140218 ACATATT-TGAAATTCCC----------ATA--AGATTACAAATTGC
i Ondatra_zibethicus.OndZib_scaffold_7387                I 5 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    83253 19 +    102263 ATACATT-TTAAATTCCC----------AT-----------------
i Onychomys_torridus.OnyTor_scaffold_2986                I 5 I 2
s Orcinus_orca.KB316932.1                                  2784040 31 -  10937097 gcacattt-ga---gttt----------atcaaa--ctattgagtgg
i Orcinus_orca.KB316932.1                                C 0 I 3
s Ovis_aries.CM001607.2                                   17589511 35 +  44047080 GCACATTTTGAAATGCCT----------ATCAAA--TTACTgagtgg
i Ovis_aries.CM001607.2                                  C 0 I 3
s Ovis_canadensis.OviCan_scaffold_2572                      177713 35 -    191736 GCACATTTTGAAATGCCT----------ATCAAA--TTACTGAGTGG
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 I 3
s Pan_paniscus.KQ411613.1                                    48063 35 +     80009 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGAGTGC
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189146921 35 + 189151597 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGAgtgc
i Pan_troglodytes.CM009242.2                             C 0 I 46
s Panthera_onca.PanOnc_flattened_line_3271                  153105 35 +    230217 GTACATTTTGAAATACTT----------AGCAAA--TTATTGAATGC
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                266416 35 +  18783137 GTACATTTTGAAATACTT----------AGCAAA--TTATTGAATGC
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4723242 35 -   8748460 GTACATTTTGAAATACTT----------AGCAAA--TTATTGAATGC
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1268446 35 -   2937107 gcacattttgaaatgcct----------atcaaa--ctactgagtgg
i Pantholops_hodgsonii.KE114653.1                        C 0 I 3
s Papio_anubis.CM001495.2                                183447154 35 + 183742232 GCAAATTTTGAAATGTCT----------CTCAAA--TTATTGAGTGC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10804 35 +     20448 GCAAATTTTGAAATGTCT----------CTCAAA--TTATTGAGTGC
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567612 35 +  20919399 GCAAATTTTGAAATGTCT----------CTCAAA--TTATTGAGTGC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   9544 35 +     41871 GCAAATTTTGAAATGTCT----------CTCAAA--TTATTGAGTGC
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12837 35 +     27711 GCAAATTTTGAAATGTCT----------CTCAAA--TTATTGAGTGC
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3836 35 -     11374 GCAAATTTTGAAATGTCT----------CTCAAA--TTATTGAGTGC
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14551 35 -     78924 GTACATTTTGAAATACTT----------ATCAAA--TTATTGAATTC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18197989 34 -  18517816 ACACATT-TTAAATTCCC----------ATA--AAACTATAGATTGC
i Peromyscus_maniculatus.KI615324.1                      I 5 C 0
s Petromus_typicus.PetTyp_scaffold_221660                      856 15 -      2102 ----ACTGTCAAGTGTCA----------A------------------
i Petromus_typicus.PetTyp_scaffold_221660                I 21 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              11109 31 +     63832 GCACATTT-GA---GTTT----------ATCAAA--CTATTGAGTGG
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            2158 35 +     68526 GCAGATTTTGAAATGCTT----------CTCAAA--TTATTGAGTGC
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        42303 35 +     89929 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGAGAGC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43717 35 +     51399 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGAGAGC
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299954 35 -  14605196 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGAGAGC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3825 34 +     22620 GC-TATTTTGAAATGCTT----------ATTAAA--TTATTGACTGG
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pithecia_albicans.k141_1476471                              5603 35 +     26961 GCAGATTTTGAAATGCCT----------CTCAAA--TTATTGAGTGC
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1731 35 +     23417 GCAGATTTTGAAATGCCT----------CTCAAA--TTATTGAGTGC
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                5595 35 +     29694 GCAGATTTTGAAATGCCT----------CTCAAA--TTATTGAGTGC
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          30621 35 +     52772 GCAGATTTTGAAATGCCT----------CTCAAA--TTATTGAGTGC
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           5617 35 +     26198 GCAGATTTTGAAATGCCT----------CTCAAA--TTATTGAGTGC
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3942148 35 +   4542175 GCAGATTTTGAAATGCCT----------CTCAAA--TTATTGAGTGC
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            5581 35 -     23490 GCAGATTTTGAAATGCCT----------CTCAAA--TTATTGAGTGC
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610            415 31 +      7680 gcacattt-ga---gttt----------atcaaa--ctattgagtgg
i Platanista_gangetica.PlaMin_flattened_line_173610      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9833 35 -     39866 GCAGATTTTGAAATGCCT----------TTCAAA--TTATTGAGTGC
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        18999 35 +     34906 GCAGATTTTGAAATGCCT----------TTCAAA--TTATTGAGTGC
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       23261 35 +     87950 GCAGATTTTGAAATGCCT----------TTCAAA--TTATTGAGTGC
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     24090 35 +     88961 GCAGATTTTGAAATGCCT----------TTCAAA--TTATTGAGTGC
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9758 35 +     39403 GCAGATTTTGAAATGCCT----------TTCAAA--TTATTGAGTGC
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          23542 35 -     87928 GCAGATTTTGAAATGCCT----------TTCAAA--TTATTGAGTGC
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         30501 35 +     60166 GCAGATTTTGAAATGCCT----------TTCAAA--TTATTGAGTGC
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30698 35 +     67232 GCAGATTTTGAAATGCCT----------TTCAAA--TTATTGAGTGC
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          26171 35 +     90634 GCAGATTTTGAAATGCCT----------TTCAAA--TTATTGAGTGC
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          23543 35 -     89403 GCAGATTTTGAAATGCCT----------TTCAAA--TTATTGAGTGC
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189135069 35 + 189387572 GCAAATTTTGAAATCCCA----------CTCAAA--TTATTGAGTGC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9574679 35 +   9816681 GCAAATTTTGAAATCCCA----------CTCAAA--TTATTGAGTGC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               77257 35 -     81375 GCAAATCTTGAAATGCCT----------CTCAAA--TTATTGAGTGT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              9074 35 +     19060 GCAAATCTTGAAATGCCT----------CTCAAA--TTATTGAGTGT
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            13099 34 -     21651 ACATATT-TTaaattccc----------ata--aaattataGAGTGC
i Psammomys_obesus.NESX01036370.1                        I 5 C 0
s Pteropus_alecto.KB030862.1                              22978801 32 +  28871421 ACACATTTTGAAATACCT----------ACCAAA--T---TGAGTGA
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1361802 32 +   4952924 ACACATTTTGAAATACCT----------ACCAAA--T---TGAGTGA
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20276305 35 -  38429054 GTACATTTTGAAATACTT----------ACCAAA--TTATTGAATGC
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             19067 35 -     91421 GCAAATCTTGAAATGCCT----------CTCAAA--TTATTGAGTGT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7613190 35 +   7812017 GCAAATCTTGAAATGCCT----------CTCAAA--TTATTGAGTGT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             19097 35 -     72585 GCAAATCTTGAAATGCCT----------CTCAAA--TTATTGAGTGT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  8563 35 +     55207 GCACATTTTGAAATGCCT----------ATCAAA--TTACTGAGTGG
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 3
s Rattus_norvegicus.chr16                                 53573427 34 +  90668790 acacatt-ttaaatttcc----------ata--aaaTTATAGAGTGC
i Rattus_norvegicus.chr16                                I 99 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        368851 33 -   3329780 -C-ATTTTTGAAATGCTT----------ATCAAA--TTATTGAGTga
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                            10764 35 -     11128 GCAAATCTTGAAATGCCT----------CTCAAA--TTATTGAGTGT
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91240132 35 - 195417433 GCAAATCTTGAAATGCCT----------CTCAAA--TTATTGAGTGT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675779 35 +   7961872 GCAAATCTTGAAATGCCT----------CTCAAA--TTATTGAGTGT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89872 35 -     96226 GCACACTTTGAAATACCT----------ACCAAA--TTATTGAGTGA
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 19 C 0
s Saiga_tatarica.SaiTat_scaffold_133311                       1045 35 +      9503 GCACATTTTGAAATGCCT----------ACCAAA--TTACTGAGCCG
i Saiga_tatarica.SaiTat_scaffold_133311                  C 0 I 3
s Semnopithecus_entellus.k141_1672505                         3938 35 -     12572 GCAAATCTTGAAATGCCT----------CTCAAA--TTACTGAGTGT
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30790 35 +     39453 GCAAATCTTGAAATGCCT----------CTCAAA--TTACTGAGTGT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           11298 31 +     27826 GCAAATCTTGAAATGCCT----------CTCAAA--TTACTG----T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10839 35 -     19483 GCAAATCTTGAAATGCCT----------CTCAAA--TTACTGAGTGT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      4137 35 -     12762 GCAAATCTTGAAATGCCT----------CTCAAA--TTACTGAGTGT
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           3982 35 +     13763 GCAAATCTTGAAATGCCT----------CTCAAA--TTACTGAGTGT
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     3004 34 -     30804 ACATATT-TTAAATTCCC----------ATA--AAATTATAGATTGC
i Sigmodon_hispidus.SigHis_scaffold_42075                I 5 C 0
s Spermophilus_dauricus.KZ294078.1                         1956113 35 -   3870691 gcacatttttaaatatct----------atc--aaATTATtgagtgt
i Spermophilus_dauricus.KZ294078.1                       I 5 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              20538 35 -    196729 GTGCATTTTGAAATACTT----------AATGAA--TTATTGAATGC
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6813679 35 +  69701581 GCACATTTTGAAGTacct----------atcaaa--ttgttgagggt
i Sus_scrofa.CM000828.4                                  C 0 I 1
s Tadarida_brasiliensis.TadBra_scaffold_25820                13211 34 +     41958 GC-TATTCTGAAATGCCT----------ATTAAG--TTATTGAGTGG
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tarsius_lariang.k141_2201908                               27734 35 +     70052 GCACATTTTGAAATGCCT----------ATTAAA--TTCTCAAATGC
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                2531 35 -     16117 GCACATTTTGAAATGCCT----------ATTAAA--TTCTCAAATGC
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186432462 35 + 186847797 GCAAATTTTGAAATGCCT----------CTCAAA--TTATTGAGTGC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              107525 15 +    114563 ----ACTGTCAAGTGTCA----------A------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Trachypithecus_auratus.k141_722599                         14876 35 -     20410 GCAAATCTTGAAATGCCT----------CTCAAA--TTACTGAGTGT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      3999 35 -     12674 GCAAATCTTGAAATGCCT----------CTCAAA--TTACTGAGTGT
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       14984 35 +     19930 GCAAATCTTGAAATGCCT----------CTCAAA--TTACTGAGTGT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      11386 35 -     19997 GCAAATCTTGAAATGCCT----------CTCAAA--TTACTGAGTGT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            51527 35 -     60166 GCAAATCTTGAAATGCCT----------CTCAAA--TTACTGAGTGT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        18990 35 -     27529 GCAAATCTTGAAATGCCT----------CTCAAA--TTACTGAGTGT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                        622 35 +      9229 GCAAATCTTGAAATGCCT----------CTCAAA--TTACTGAGTGT
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          12524 35 -     21137 GCAAATCTTGAAATGCCT----------CTCAAA--TTACTGAGTGT
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                     624 35 +      9131 GCAAATCTTGAAATGCCT----------CTCAAA--TTACTGAGTGT
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                          588 35 -      3730 GCAAATCTTGAAATGCCT----------CTCAAA--TTACTGAGTGT
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28856 35 +     32220 GCAAATCTTGAAATGCCT----------CTCAAA--TTACTGAGTGT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942953 35 +   6242583 GCAAATCTTGAAATGCCT----------CTCAAA--TTACTGAGTGT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       12205 35 +     20839 GCAAATCTTGAAATGCCT----------CTCAAA--TTACTGAGTGT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    2459 35 +     27266 CTGCATTTTGAAATGGCT----------ATCAAA--TTACTGAGTGG
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 I 3
s Tupaia_chinensis.KB320699.1                              2158371 34 +   4065304 GTGTACTTTGAAATT-TT----------ACCAAA--TTATTGAGAGc
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_306982                     791 34 -      4186 GTGTACTTTGAAATT-TT----------ACCAAA--TTATTGAGAGC
i Tupaia_tana.TupTan_flattened_line_306982               C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15740293 31 +  33153633 GCACATTT-GA---GTTT----------ATCAAA--CTATTGAGTGG
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Vicugna_pacos.KN270157.1                                 5373959 29 -   5488506 GCATATTTTGTAATGCCT----------AAcaaa--ttg------ag
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          3130 35 +    224448 GCACATTTTTAAATGTCT----------ATC--AAATTATTGAGTGT
i Xerus_inauris.XerIna_scaffold_2302                     I 5 I 4
s Zapus_hudsonius.ZapHud_scaffold_11398                      16673 29 +     63895 GCACATTTTAAACCCGCT----------ATC--AAAGTACT------
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 5 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_761354             598 31 -      1267 GCACATTT-GA---GTTT----------ATCAAA--CTATTGAGTGG
i Ziphius_cavirostris.ZipCav_flattened_line_761354       C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 12841 537 -     43706 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Uropsilus_gracilis.UroGra_scaffold_12083                   54925 394 -     77625 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tonatia_saurophila.TonSau_scaffold_294                     83098  2 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_85600                    4490  2 +     18632 I
e Tapirus_terrestris.TapTer_scaffold_755                    389823 643 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      121344 643 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Sorex_araneus.JH798187.1                                13652641 429 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    154809 432 -    313613 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Pteronotus_parnellii.KE909381.1                            16825  2 -     21811 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Otocyon_megalotis.JAEUCK010005147.1                       464401 867 -    559221 I
e Oryctolagus_cuniculus.CM000791.1                        67149665 1414 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9151314 530 -   9404916 I
e Noctilio_leporinus.NocLep_scaffold_251                    759530  2 +    783361 I
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 143344  2 -    366855 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                17753  2 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184611 154 -  29670104 I
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Manis_pentadactyla.KN006162.1                              53022 987 -    317179 I
e Manis_javanica.JSZB01003497.1                              20877 990 +    737560 I
e Lycaon_pictus.CM007581.1                                17957377 535 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     8427 743 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Jaculus_jaculus.JH725527.1                               8278673 121 -   9596543 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               35993 651 +    498745 I
e Equus_caballus.CM000403.2                               18533964 651 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1286155 651 +   4378816 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    8624 649 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  675871 642 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8632007  2 +  20541912 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            69437  2 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Crocidura_indochinensis.CroInd_scaffold_239572              3398  0 -      5012 I
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Condylura_cristata.JH655891.1                           17549953 974 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            6415  2 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5047 647 -     25243 I
e Carollia_perspicillata.CarPer_scaffold_92756                7006  2 -     11696 I
e Canis_lupus_orion.HG994398.1                            18502439 535 +  63665305 I
e Canis_lupus_familiaris.chr16                            17961137 535 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9036666 537 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     1966 535 -     43241 I
e CanFam4.chr16                                           17801223 537 -  60362399 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6662  2 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Anoura_caudifer.AnoCau_scaffold_1412                      187255  2 +    412891 I
e Allactaga_bullata.AllBul_scaffold_9566                     75924 121 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T

a score=0.000000
s hg38.chrUn_KI270753v1                                      10752  9 +     62944 TT---G-----T------TCAG---------T
s Acinonyx_jubatus.LLWD01001279.1                           829326 16 -   1699592 TTGtgg-tttat------ttgt---------c
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     73475  5 +     87051 ------------------TCAG---------T
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   18617 12 -     52922 TTGTAG-----T------TTAG---------T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         18554 12 -     28001 TTGTAG-----T------TCAG---------T
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          9049 12 -     18505 TTGTAG-----T------TCAG---------T
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9902 12 -     12518 TTGTAG-----T------TCAG---------T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             10357 12 +     51355 TTATAG-----T------TCAG---------T
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                3464 12 -     36483 TTATAG-----T------TCAG---------T
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              13917 12 +     28687 TTATAG-----T------TCAG---------T
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 2389 12 +     27940 TTATAG-----T------TCAG---------T
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            3468 21 -      9457 TTATAG-----T------TCAGTTAGTTCAGT
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             2426 21 +     30492 TTATAG-----T------TCAGTTAGTTCAGT
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              6421 12 +     47717 TTATAG-----T------TCAG---------T
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              3157 12 +      5663 TTATAG-----T------TCAG---------T
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             17608 12 +     50774 TTATAG-----T------TCAG---------T
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          679483  3 -   2318259 --------------------AT---------T
i Ammotragus_lervia.NIVO01071767.1                       I 3 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303               768  3 -     32520 --------------------AC---------T
i Antilocapra_americana.AntAmePen_scaffold_43303         I 237 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      14676  2 +     20879 TT------------------------------
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 4
s Ateles_geoffroyi_b.tarseq_1536                             21210622 12 -  21539123 TTATAG-----T------TCAG---------T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               45418 12 -     48001 TTATAG-----T------TCAG---------T
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 28222 12 -     30947 TTATAG-----T------TCAG---------T
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                                9994 12 -     89868 TTATAG-----T------TCAG---------T
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              14378 12 -     40414 TTATAG-----T------TCAG---------T
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                22267 12 +     72325 TTATAG-----T------TCAG---------T
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193947 10 +  23207421 tt-t-a-----t------atat---------t
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         4412 10 -     18090 tt-t-a-----t------atat---------t
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    30579  3 +     34529 --------------------AT---------T
i Beatragus_hunteri.BeaHun_scaffold_50177                I 3 C 0
s Bison_bison.KN261452.1                                    203191  3 -    288883 --------------------AC---------T
i Bison_bison.KN261452.1                                 I 3 C 0
s Bos_indicus.CM003047.1                                  20276430  3 +  48749331 --------------------AN---------T
i Bos_indicus.CM003047.1                                 I 3 C 0
s Bos_mutus.JH880303.1                                     1128984  3 -   1948126 --------------------AC---------T
i Bos_mutus.JH880303.1                                   I 3 C 0
s Bos_taurus.CM000203.6                                   18087068  3 +  45695690 --------------------at---------t
i Bos_taurus.CM000203.6                                  I 3 C 0
s Bubalus_bubalis.KI419123.1                               2823021  3 +   4408762 --------------------at---------t
i Bubalus_bubalis.KI419123.1                             I 3 C 0
s Cacajao_ayresi.k141_552049                                103238 12 -    122966 TCATAG-----T------TCAG---------T
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   62741 12 +     81800 TCATAG-----T------TCAG---------T
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31923 12 -     95584 TCATAG-----T------TCAG---------T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         56024 12 -    119600 TCATAG-----T------TCAG---------T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10004466 10 -  17673402 tt-t-a-----t------ttat---------t
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2336938 10 -   7040546 tt-t-a-----t------ttat---------t
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  405236 10 -   1652518 tt-t-a-----t------ttat---------t
i Camelus_ferus.KB017975.1                               C 0 C 0
s Capra_aegagrus.CM003241.1                               18833493  3 +  46296322 --------------------at---------t
i Capra_aegagrus.CM003241.1                              I 3 C 0
s Capra_hircus.CM004588.1                                 18064310  3 -  44709034 --------------------at---------t
i Capra_hircus.CM004588.1                                I 3 C 0
s Carlito_syrichta.NW_007259797.1                           157272 12 -    496798 TTGTAA-----T------TCAA---------T
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    139225 12 +    179628 TTGTGA-----C------TTAT---------T
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     96128  4 +    217609 -------------------TTT---------T
i Catagonus_wagneri.CatWag_scaffold_2839                 I 1 C 0
s Cephalopachus_bancanus.k141_1423433                         6770 12 +     31688 TTGTAA-----T------TCAA---------T
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4479573 12 +   4669795 TTGCAG-----T------GCag---------t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        4070 12 +     17872 TTGCAG-----T------GCAG---------T
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4665 12 -     14043 TTGCAG-----T------GCAG---------T
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12760 12 +     27781 TTGCAG-----T------GCAG---------T
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12914 12 -     20310 TTGTAG-----T------TCAG---------T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15890 12 +     29689 TTGTAG-----T------TCAG---------T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10650 12 -     20078 TTGTAG-----T------TCAG---------T
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          18561 12 -     27936 TTGTAG-----T------TCAG---------T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            7436 12 -     17152 TTGTAG-----T------TCAG---------T
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38827160 12 +  39242232 TTGTAG-----T------TCAG---------T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226668 12 -  21565898 TTGTAG-----T------TCAG---------T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43787 12 -     53127 TTGTAG-----T------TCAG---------T
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        4037 12 +     13442 TTGTAG-----T------TCAG---------T
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       18583 12 -     27947 TTGTAG-----T------TCAG---------T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1608 12 +     10558 TTGTAG-----T------TCAT---------T
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4617 12 +     14005 TTGTAG-----T------TCAG---------T
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1847 12 -     17098 TTATAG-----T------TTAG---------T
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1723 12 +     17877 TTATAG-----T------TCAG---------T
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            159290 12 -    216457 TTATAG-----T------TCAG---------T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63761 12 +     76511 TTATAG-----T------TCAG---------T
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chiropotes_israelita.k141_747660                          100367 12 +    146308 TCATAA-----T------TCAG---------T
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          32174 12 -     50570 TAATAA-----T------TCAG---------T
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18432487 12 -  18827391 TTGTAG-----T------TCAG---------T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18984 12 -     50209 TTGTAG-----C------TCAG---------T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135425988 12 + 135778131 TTGTAG-----T------TCag---------t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1914489 12 +   2368649 TTGTAG-----T------TCAG---------T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952737 12 + 200372422 TTGTAG-----T------TCAA---------T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              41010 12 +     84244 TTGTAG-----T------TCAG---------T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           2377 16 +     23735 TTATAG-----T--TTATTTAT---------A
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 52747  6 +     63868 -----------C------TCAG---------T
i Cricetomys_gambianus.CriGam_scaffold_18520             I 5 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             30504 16 -     87169 TTGTGGTTT-AT------TTTT---------T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 1
s Delphinapterus_leucas.KZ290073.1                        16813830 10 +  35494412 tt-t-a-----t------atat---------c
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Eidolon_helvum.AWHC01278734.1                                588 16 +      2334 ttgtgt-----t--ttgtttat---------t
i Eidolon_helvum.AWHC01278734.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       313964  3 +    607251 --------------------at---------t
i Elaphurus_davidianus.JRFZ01104969.1                    I 3 C 0
s Ellobius_lutescens.LOEQ01008920.1                          23237 12 -    110024 TTGTGG-----C------TCAA---------C
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                            3158 12 +      8657 TTGTGG-----C------TCAA---------C
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2149087 12 -  14770903 Ttgtga-----c------ttac---------t
i Eptesicus_fuscus.JH977646.1                            C 0 I 5
s Erythrocebus_patas.Contig38                             21209159 12 -  21539334 TTGTAG-----T------TCAG---------T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           13259 10 +    133382 TT--TA-----T------ATAT---------T
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             27205 10 -     44125 TT--TA-----T------ATAT---------T
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20239070 16 + 206538554 TTGTGGTCT-AT------TTGT---------T
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20197945 16 + 205367284 TTGTGG-tctat------ttgt---------t
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 11605 16 -     36744 TTGTGGTCT-AT------TTGT---------T
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               4635 12 -      9135 TTATGG-----T------TTAG---------T
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     611199  3 -    660261 --------------------AC---------T
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 3 C 0
s Glis_glis.GliGli_scaffold_19807                            33342 12 +     49224 TTATGG-----A------TTAT---------T
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              19997  9 -     32273 TT---G-----T------TCAG---------T
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186342133  9 + 186649187 tt---g-----t------tcag---------t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   35350 12 +     78134 TTATGG-----A------TTAT---------T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               244313 15 +    327341 TTGTGGTTT-AT------GTAT----------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 1
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 21798  3 +     36099 --------------------at---------t
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 3 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112693  7 +    128679 TT--TA-----T---------T---------T
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       112435 12 +   1711038 ttgcag-----t------ttat---------t
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188               1001 12 +      9903 TTGCAG-----T------TTAT---------T
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 C 0
s Hoolock_leuconedys.ctg274                                    438790 12 +    630532 TT---G-----TAGT---TCAG---------T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  47053 22 +     55795 TGTGGGTTTTTT-GTTTTTTGT---------T
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 1
s Ictidomys_tridecemlineatus.JH393364.1                    7522991  2 -   7955117 TT------------------------------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 4
s Inia_geoffrensis.IniGeo_flattened_line_34779                1036 10 -     31341 TT--TA-----T------ATAT---------C
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                  782 10 -     18011 TT--TA-----T------ATAT---------C
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         16426 12 -     38430 TTATAG-----T------TCAG---------T
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    18794 12 -     42476 TTGTGG-----T------TTAT---------T
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 5
s Lipotes_vexillifer.KE559953.1                             270091 10 -    662738 tt-t-a-----t------atat---------c
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1441116 12 +   1826925 TTGCAG-----T------GCAG---------T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                              10928 12 +     40492 TTGCAG-----T------GCAG---------T
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59680182 12 +  60120075 TTGCAG-----T------GCAG---------T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16699 12 -     26193 TTGCAG-----T------GCAG---------T
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            84475 12 -    114318 TTGCAG-----T------GCAG---------T
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 10166 12 -     23192 TTGCAG-----T------GCAG---------T
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19630 12 -     29190 TTGCAG-----T------GCAG---------T
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  28208 12 +     37952 TTGCAG-----T------GCAG---------T
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186843285 12 + 187317192 TTGCAG-----T------GCAg---------t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461863 12 -  25927173 TTGCAG-----T------GCag---------t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  84064 12 +     89720 TTGCAG-----T------GCAG---------T
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                11057 12 +     20474 TTGCAG-----T------ACAG---------T
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10854 12 -     14993 TTGCAG-----T------GCAG---------T
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333716 12 -    668171 TTGCAG-----T------GCAG---------T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 9166 12 -     24072 TTGCAG-----T------GCAG---------T
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29797 12 -     45290 TTGCAG-----T------GCAG---------T
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92747 16 +     94391 TTGTGC-----T--TTGTTTAT---------T
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23941385 12 -  24302211 TTGCAG-----T------GCAG---------T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355500 12 +    752769 TTGCAG-----T------GCAG---------T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33105282  2 -  40650429 TT------------------------------
i Marmota_marmota.CZRN01000018.1                         C 0 I 4
s Megaderma_lyra.MegLyr_scaffold_4542                        15327 12 -    207569 TTGTAG-----T--TT----AT---------T
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 35499 11 +    140813 T-GAGG-----C------TCAG---------T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    5474 10 +     10310 TT--TA-----T------ATAT---------C
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1852298 10 +   8254450 Ctgtga-----t------tta-----------
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 3
s Miniopterus_schreibersii.MinSch_scaffold_18080             35982 10 +     64694 CTGTGA-----T------TTA-----------
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 3
s Miopithecus_ogouensis.k141_534055                          13065 12 -     28506 TTGTAG-----T------TCAG---------T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    29215 10 -    437263 TT--TA-----T------ATAT---------C
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   3245  3 +     82753 --------------------AT---------T
i Moschus_moschiferus.MosMos_scaffold_13123              I 3 C 0
s Murina_feae.MurFea_scaffold_85699                           9046 12 +     14753 TTGTGA-----C------TTAT---------T
i Murina_feae.MurFea_scaffold_85699                      C 0 I 1
s Mus_caroli.LT608237.1                                   84363867 12 - 120012414 TTGTTG-----C------TCAG---------T
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87653367 12 - 129401213 TTGTTG-----C------TCAG---------T
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31358092 12 -  89631738 TTGCTG-----C------TCAG---------G
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90755856 12 - 130317789 TTGTTG-----C------TCAG---------T
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              6832  9 +     14296 TTATGG-----A------T------------T
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Myotis_brandtii.KE162005.1                                282792 12 -  10118263 ttgtga-----c------ttat---------t
i Myotis_brandtii.KE162005.1                             C 0 I 5
s Myotis_davidii.KB100139.1                                1590110 12 -   6019432 ttgtga-----c------ttat---------t
i Myotis_davidii.KB100139.1                              C 0 I 5
s Myotis_lucifugus.GL429869.1                              3906222 12 -   4330536 ttgtga-----c------ttat---------t
i Myotis_lucifugus.GL429869.1                            C 0 I 5
s Myotis_myotis.MyoMyo_scaffold_44643                          524 12 +     25416 TTGTGA-----C------TTAT---------T
i Myotis_myotis.MyoMyo_scaffold_44643                    C 0 I 5
s Nannospalax_galili.KL204518.1                            3931210 12 -   9623020 TTCTGA-----C------TTAC---------T
i Nannospalax_galili.KL204518.1                          C 0 I 58
s Nasalis_larvatus.k141_413338                               19115 12 +     21681 TTGTAG-----T------TCAG---------T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5868178 10 +   7148211 TT--TA-----T------ATAT---------C
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Ochotona_princeps.JH802162.1                             1366963 12 +   3988456 TACTGG-----T------TTAA---------T
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         146766  3 +    630418 --------------------at---------t
i Odocoileus_virginianus.KZ100018.1                      I 3 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          79082  2 -    150152 TT------------------------------
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 4
s Ondatra_zibethicus.OndZib_scaffold_7387                      331 12 +    140218 TTGTGG-----C------TCAA---------T
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    83274  4 +    102263 -----G-----C------TC------------
i Onychomys_torridus.OnyTor_scaffold_2986                I 2 I 12
s Orcinus_orca.KB316932.1                                  2784074  7 -  10937097 -----a-----t------atat---------c
i Orcinus_orca.KB316932.1                                I 3 C 0
s Ovis_aries.CM001607.2                                   17589549  3 +  44047080 --------------------at---------t
i Ovis_aries.CM001607.2                                  I 3 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      177751  3 -    191736 --------------------AT---------T
i Ovis_canadensis.OviCan_scaffold_2572                   I 3 C 0
s Pan_paniscus.KQ411613.1                                    48098  9 +     80009 tt---g-----t------tcag---------t
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03002948.1                             24026  9 +     28717 tt---g-----t------tcag---------t
i Pan_troglodytes.NBAG03002948.1                         I 80 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  153140 16 +    230217 TTGTGGTTT-AT------TTGT---------T
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                266451 16 +  18783137 ttgtgg-tttat------ttgt---------t
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4723277 16 -   8748460 ttgtgg-tttat------ttgt---------t
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1268484  3 -   2937107 --------------------at---------t
i Pantholops_hodgsonii.KE114653.1                        I 3 C 0
s Papio_anubis.CM001495.2                                183447189 12 + 183742232 TTGCAG-----T------GCag---------t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10839 12 +     20448 TTGCAG-----T------GCAG---------T
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567647 12 +  20919399 TTGCAG-----T------GCAG---------T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   9579 12 +     41871 TTGCAG-----T------GCAG---------T
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12872 12 +     27711 TTGCAG-----T------GCAG---------T
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3871 12 -     11374 TTGCAG-----T------GCAG---------T
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14586 12 -     78924 TTGTGGTT-GAT------T-------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18198023 12 -  18517816 TTgtga-----c------tcaa---------t
i Peromyscus_maniculatus.KI615324.1                      C 0 I 15980
s Phocoena_phocoena.PhoPho_flattened_line_24159              11140 10 +     63832 TT--TA-----T------ATAT---------C
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            2193 12 +     68526 TTGTAA-----T------TCAG---------T
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        42338 12 +     89929 TTGTAG-----T------TCAG---------T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43752 12 +     51399 TTGTAG-----T------TCAG---------T
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14299989 12 -  14605196 TTGTAG-----T------TCag---------t
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3859 12 +     22620 TTGTGG-----C------TTTT---------T
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 8
s Pithecia_albicans.k141_1476471                              5638 12 +     26961 TTATAG-----T------TCAG---------T
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1766 12 +     23417 TTATAG-----T------TCAG---------T
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                5630 12 +     29694 TTATAG-----T------TCAG---------T
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          30656 12 +     52772 TTATAG-----T------TCAG---------T
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           5652 12 +     26198 TTATAG-----T------TCAG---------T
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3942183 12 +   4542175 TTATAG-----T------TCAG---------T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            5616 12 -     23490 TTATAG-----T------TCAG---------T
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610            446 10 +      7680 ct-t-a-----t------atat---------c
i Platanista_gangetica.PlaMin_flattened_line_173610      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9868 12 -     39866 TTATAG-----T------TCAG---------T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        19034 12 +     34906 TTATAG-----T------TCAG---------T
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       23296 12 +     87950 TTATAG-----T------TCAG---------T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     24125 12 +     88961 TTATAG-----T------TCAG---------T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9793 12 +     39403 TTATAG-----T------TCAG---------T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          23577 12 -     87928 TTATAG-----T------TCAG---------T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         30536 12 +     60166 TTATAG-----T------TCAG---------T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30733 12 +     67232 TTATAG-----T------TCAG---------T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          26206 12 +     90634 TTATAG-----T------TCAG---------T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          23578 12 -     89403 TTATAG-----T------TCAG---------T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189135104 12 + 189387572 TTGtag-----t------tcag---------t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9574714 12 +   9816681 TTGTAG-----T------TCAG---------T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               77292 12 -     81375 TTGTAG-----T------TCAG---------T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              9109 12 +     19060 TTGTAG-----T------TCAG---------T
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            13133 10 -     21651 T-GAGG-----C------TCA----------T
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteropus_alecto.KB030862.1                              22978833 16 +  28871421 TTGtgc-----t--ttgtttac---------t
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1361834 16 +   4952924 TTgtgc-----t--ttgtttac---------t
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20276340 16 -  38429054 ttgtgg-tttat------ttgt---------t
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             19102 12 -     91421 TTGTAG-----T------TCAG---------T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7613225 12 +   7812017 TTGTAG-----T------TCAG---------T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             19132 12 -     72585 TTGTAG-----T------TCAG---------T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  8601  3 +     55207 --------------------AT---------T
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 3 C 0
s Rattus_norvegicus.chr16                                 53573461 12 +  90668790 TTGTGG-----C------TCAG---------T
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        368884 12 -   3329780 ttgtag-----t------ttat---------t
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_217274                            10799 12 -     11128 TTGTAG-----T------TCAG---------T
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91240167 10 - 195417433 TTGTAg-----t------t--g---------t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675814 12 +   7961872 TTGTAG-----T------TCAG---------T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89907 16 -     96226 TTGTGC-----T--TTGTTTAT---------T
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_133311                       1083  3 +      9503 --------------------AT---------T
i Saiga_tatarica.SaiTat_scaffold_133311                  I 3 C 0
s Semnopithecus_entellus.k141_1672505                         3973 12 -     12572 TTGTAG-----T------TCAG---------T
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30825 12 +     39453 TTGTAG-----T------TCAG---------T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           11329 12 +     27826 TTGTAG-----T------TCAG---------T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10874 12 -     19483 TTGTAG-----T------TCAG---------T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      4172 12 -     12762 TTGTAG-----T------TCAG---------T
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           4017 12 +     13763 TTGTAG-----T------TCAG---------T
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     3038 12 -     30804 TTGTAG-----C------TCAG---------C
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1956148  2 -   3870691 tt------------------------------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 4
s Suricata_suricatta.SurSur_flattened_line_6629              20573 15 -    196729 TTGTGGTTT-AT------GTAT----------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 1
s Sus_scrofa.CM000828.4                                    6813715  4 +  69701581 -------------------ttt---------t
i Sus_scrofa.CM000828.4                                  I 1 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                13245 12 +     41958 TTGTGA-----T------TTGT---------G
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 5
s Tarsius_lariang.k141_2201908                               27769 12 +     70052 TTATAA-----T------TCAA---------T
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                2566 12 -     16117 TTATAA-----T------TCAA---------T
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186432497 12 + 186847797 TTGCAG-----T------GCAg---------t
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                         14911 12 -     20410 TTGTAG-----T------TCAG---------T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      4034 12 -     12674 TTGTAG-----T------TCAG---------T
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       15019 12 +     19930 TTGTAG-----T------TCAG---------T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      11421 12 -     19997 TTGTAG-----T------TCAG---------T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            51562 12 -     60166 TTGTAG-----T------TCAG---------T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        19025 12 -     27529 TTGTAG-----T------TCAG---------T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                        657 12 +      9229 TTGTAG-----T------TCAG---------T
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          12559 12 -     21137 TTGTAG-----T------TCAG---------T
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                     659 12 +      9131 TTGTAG-----T------TCAG---------T
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                          623 12 -      3730 TTGTAG-----T------TCAG---------T
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28891 12 +     32220 TTGTAG-----T------TCAG---------T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5942988 12 +   6242583 TTGTAG-----T------TCAG---------T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       12240 12 +     20839 TTGTAG-----T------TCAG---------T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    2497  3 +     27266 --------------------AT---------T
i Tragulus_javanicus.TraJav_scaffold_40725               I 3 C 0
s Tupaia_chinensis.KB320699.1                              2158405 12 +   4065304 ttatag-----t------ttat---------t
i Tupaia_chinensis.KB320699.1                            C 0 I 3
s Tupaia_tana.TupTan_flattened_line_306982                     825 12 -      4186 TTATAG-----T------TTAT---------T
i Tupaia_tana.TupTan_flattened_line_306982               C 0 I 3
s Tursiops_truncatus.MRVK01000835.1                       15740324 10 +  33153633 CT--TA-----T------ATAT---------C
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Vicugna_pacos.KN270157.1                                 5373988 10 -   5488506 tt-t-a-----t------ttat---------t
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          3169  1 +    224448 -------------------------------T
i Xerus_inauris.XerIna_scaffold_2302                     I 4 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      16702  3 +     63895 --------------------GT---------T
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_761354             629 10 -      1267 TT--TA-----T------ATAT---------C
i Ziphius_cavirostris.ZipCav_flattened_line_761354       C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 12841 537 -     43706 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Uropsilus_gracilis.UroGra_scaffold_12083                   54925 394 -     77625 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tonatia_saurophila.TonSau_scaffold_294                     83098  2 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_85600                    4490  2 +     18632 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              107540  0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    389823 643 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      121344 643 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Sorex_araneus.JH798187.1                                13652641 429 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    154809 432 -    313613 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Pteronotus_parnellii.KE909381.1                            16825  2 -     21811 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Petromus_typicus.PetTyp_scaffold_221660                      871  0 -      2102 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Otocyon_megalotis.JAEUCK010005147.1                       464401 867 -    559221 I
e Oryctolagus_cuniculus.CM000791.1                        67149665 1414 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Octodon_degus.JH651603.1                                  749928  0 +  11899542 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9151314 530 -   9404916 I
e Noctilio_leporinus.NocLep_scaffold_251                    759530  2 +    783361 I
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     73439  0 -     80779 C
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 143344  2 -    366855 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                17753  2 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184611 154 -  29670104 I
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Manis_pentadactyla.KN006162.1                              53022 987 -    317179 I
e Manis_javanica.JSZB01003497.1                              20877 990 +    737560 I
e Lycaon_pictus.CM007581.1                                17957377 535 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     8427 743 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Jaculus_jaculus.JH725527.1                               8278673 121 -   9596543 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hystrix_cristata.HysCri_scaffold_5660                      85084  0 +    135385 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23782  0 -    143317 C
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20664158  0 +  22651954 C
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Fukomys_damarensis.KN121974.1                             852512  0 +   3816255 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               35993 651 +    498745 I
e Equus_caballus.CM000403.2                               18533964 651 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1286155 651 +   4378816 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 35526  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    38384  0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    8624 649 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  675871 642 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8632007  2 +  20541912 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            69437  2 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_15900             2011  0 -     75252 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  38182  0 +     51376 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Crocidura_indochinensis.CroInd_scaffold_239572              3398  0 -      5012 I
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Condylura_cristata.JH655891.1                           17549953 974 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1254902  0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            6415  2 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5047 647 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                       102948  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18364066  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18351806  0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                7006  2 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                    3253  0 -     12242 C
e Canis_lupus_orion.HG994398.1                            18502439 535 +  63665305 I
e Canis_lupus_familiaris.chr16                            17961137 535 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9036666 537 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     1966 535 -     43241 I
e CanFam4.chr16                                           17801223 537 -  60362399 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6662  2 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Anoura_caudifer.AnoCau_scaffold_1412                      187255  2 +    412891 I
e Allactaga_bullata.AllBul_scaffold_9566                     75924 121 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T

a score=0.000000
s hg38.chrUn_KI270753v1                                      10761 40 +     62944 TATT--TT-------T--AATAA----A-TG-TA-TTTAATACGGAT---------------TGTGTACAGTG
s Acinonyx_jubatus.LLWD01001279.1                           829342 30 -   1699592 t-----tt-------t--aatga----t-AA-TG-GCTAATACTGAC---------------TGTG-------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 8
s Acomys_cahirinus.AcoCah_scaffold_12655                     73480 30 +     87051 T-----TT-------T--AAGGA----T-AG-TA-GTCAGGGATGAT---------------AACG-------
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 8
s Allenopithecus_nigroviridis.k141_3361533                   18629 40 -     52922 TATT--TT-------T--AGTAA----A-TT-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         18566 40 -     28001 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          9061 40 -     18505 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGAGTACAGTG
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9914 40 -     12518 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             10369 37 +     51355 TATT--TT-------T--AATAA----A-AG-TA-TTCAGTATGGAT---------------TGTATACA---
i Alouatta_belzebul.k141_3560514                         C 0 I 14
s Alouatta_caraya.k141_1701091                                3476 37 -     36483 TATT--TT-------T--AATAA----A-AG-TA-TTCAGTATGGAT---------------TGTATACA---
i Alouatta_caraya.k141_1701091                           C 0 I 14
s Alouatta_discolor.k141_566626                              13929 37 +     28687 TATT--TT-------T--AATAA----A-AG-TA-TTCAGTATGGAT---------------TGTATACA---
i Alouatta_discolor.k141_566626                          C 0 I 14
s Alouatta_juara.k141_1302312                                 2401 37 +     27940 TATT--TT-------T--AATAA----A-AG-TA-TTCAGTATGGAT---------------TGTATACA---
i Alouatta_juara.k141_1302312                            C 0 I 14
s Alouatta_macconnelli.k141_918386                            3489 37 -      9457 TATT--TT-------T--AATAA----A-AG-TA-TTCAGTATGGAT---------------TGTATACA---
i Alouatta_macconnelli.k141_918386                       C 0 I 14
s Alouatta_nigerrima.k141_1929159                             2447 37 +     30492 TATT--TT-------T--AATAA----A-AG-TA-TTCAGTATGGAT---------------TGTATACA---
i Alouatta_nigerrima.k141_1929159                        C 0 I 14
s Alouatta_palliata.k141_2135620                              6433 40 +     47717 TATT--TT-------T--AATAA----A-AG-TA-TTCAGTATGGAT---------------TGTATACAGTG
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              3169 37 +      5663 TATT--TT-------T--AATAA----A-AG-TA-TTCAGTATGGAT---------------TGTATACA---
i Alouatta_puruensis.k141_362188                         C 0 I 14
s Alouatta_seniculus.k141_117119                             17620 37 +     50774 TATT--TT-------T--AATAA----A-AG-TA-TTCAGTATGGAT---------------TGTATACA---
i Alouatta_seniculus.k141_117119                         C 0 I 14
s Ammotragus_lervia.NIVO01071767.1                          679486 30 -   2318259 T-----TT-------T--AAtga----t-ag-tg-gacaatattgac---------------catg-------
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 8
s Antilocapra_americana.AntAmePen_scaffold_43303               771 30 -     32520 T-----TT-------T--AATGA----T-AG-TG-GTCAATATTGAC---------------CATG-------
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 I 2
s Aplodontia_rufa.AprRuf_scaffold_68852                      14682 30 +     20879 C-----TT-------T--CTTAA----T-AC-TA-ATCATTATCGGT---------------CATG-------
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 4 I 18
s Ateles_geoffroyi_b.tarseq_1536                             21210634 40 -  21539123 TATT--TT-------T--AATAA----A-AT-TA-TTCCATATGGAT---------------TGTATACAGTG
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               45430 40 -     48001 TATT--TT-------T--AATAA----A-AT-TA-TTCCATATGGAT---------------TGTATACAGTG
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 28234 40 -     30947 TATT--TT-------T--GATAA----A-AT-TA-TTCCATATGGAT---------------TGTATACAGTG
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               10006 40 -     89868 TATT--TT-------T--AATAA----A-AT-TA-TTCCATATGGAT---------------TGTATACAGTG
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              14390 40 -     40414 TATT--TT-------T--GATAA----A-AT-TA-TTCCATATGGAT---------------TGTATACAGTG
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                22279 40 +     72325 TATT--TT-------T--AATAA----A-AT-TA-TTCCATATGGAT---------------TGTATACAGTG
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193957 30 +  23207421 t-----tt-------t--aatga----t-ag-tg-gtgaatattgac---------------caca-------
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 8
s Balaenoptera_bonaerensis.DF707048.1                         4422 30 -     18090 t-----tt-------t--aatga----t-ag-tg-gtgaatattgac---------------cacg-------
i Balaenoptera_bonaerensis.DF707048.1                    C 0 I 8
s Beatragus_hunteri.BeaHun_scaffold_50177                    30582 30 +     34529 T-----TT-------T--AGTGA----T-AG-TG-GTCAATATTTAC---------------CATG-------
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 8
s Bison_bison.KN261452.1                                    203194 30 -    288883 T-----TT-------T--AGTGA----T-AG-TG-GTCAATATTGAC---------------CCTG-------
i Bison_bison.KN261452.1                                 C 0 I 8
s Bos_indicus.CM003047.1                                  20276433 30 +  48749331 T-----TT-------T--AATGA----T-AG-TG-GTCAATATTGAC---------------CCTG-------
i Bos_indicus.CM003047.1                                 C 0 I 8
s Bos_mutus.JH880303.1                                     1128987 30 -   1948126 T-----TT-------T--AGTGA----T-AG-TG-GTCAATATTGAC---------------CCTG-------
i Bos_mutus.JH880303.1                                   C 0 I 8
s Bos_taurus.CM000203.6                                   18087071 30 +  45695690 t-----tt-------t--aatga----t-ag-tg-GTCAATATTGAC---------------CCTG-------
i Bos_taurus.CM000203.6                                  C 0 I 8
s Bubalus_bubalis.KI419123.1                               2823024 30 +   4408762 t-----tt-------t--aatga----t-ag-tg-GTCAATATTGAC---------------CCTG-------
i Bubalus_bubalis.KI419123.1                             C 0 I 8
s Cacajao_ayresi.k141_552049                                103250 40 -    122966 TATT--TT-------T--AATAA----A-AG-TA-CTCAATATAGAT---------------TGTACACAGTG
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   62753 40 +     81800 TATT--TT-------T--AATAA----A-AG-TA-CTCAATATAGAT---------------TGTACACAGTG
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31935 40 -     95584 TATT--TT-------T--AATAA----A-AG-TA-CTCAATATAGAT---------------TGTACACAGTG
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         56036 40 -    119600 TATT--TT-------T--AATAA----A-AG-TA-CTCAATATAGAT---------------TGTACACAGTG
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10004476 30 -  17673402 t-----tt-------t--aatca----t-ag-tg-GTCAAAAttggc---------------catt-------
i Camelus_bactrianus.KN276810.1                          C 0 I 8
s Camelus_dromedarius.KN272107.1                           2336948 30 -   7040546 t-----tt-------t--aatca----t-ag-tg-GTCAAAAttggc---------------catt-------
i Camelus_dromedarius.KN272107.1                         C 0 I 8
s Camelus_ferus.KB017975.1                                  405246 30 -   1652518 t-----tt-------t--aatca----t-ag-tg-GTCAAAAttggc---------------catt-------
i Camelus_ferus.KB017975.1                               C 0 I 8
s Capra_aegagrus.CM003241.1                               18833496 30 +  46296322 t-----tt-------t--aatga----t-ag-tg-GACAATATCGAC---------------CATG-------
i Capra_aegagrus.CM003241.1                              C 0 I 8
s Capra_hircus.CM004588.1                                 18064313 30 -  44709034 t-----tt-------t--aatga----t-ag-tg-gacaatatcgac---------------catg-------
i Capra_hircus.CM004588.1                                C 0 I 8
s Carlito_syrichta.NW_007259797.1                           157284 46 -    496798 TATT--GTACAATGGT--AGTAG----C-TGATA-TCAACCATGGAT---------------GGTGT--AGTG
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    139237 30 +    179628 T-----TT-------T--TAGGG----T-AC-TA-GTCAGTACTGAT---------------CACA-------
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 38
s Catagonus_wagneri.CatWag_scaffold_2839                     96132 32 +    217609 T-----Tt-------ttaaatga----t-ag-tg-gtcagtattgac---------------cacg-------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 8
s Cephalopachus_bancanus.k141_1423433                         6782 46 +     31688 TATT--GTACGATGGT--AGTAG----C-TGATA-TCAACCATGGAT---------------GGTGT--AGTG
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4479585 39 +   4669795 tatt--tt-------t--agtaa----a-tg-ta-tTCAATATGGAT---------------TGTGT-CAGTG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        4082 39 +     17872 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGT-CAGTG
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4677 39 -     14043 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGT-CAGTG
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12772 39 +     27781 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGT-CAGTG
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12926 40 -     20310 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15902 40 +     29689 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10662 40 -     20078 TATT--TT-------T--AGTAA----A-GG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          18573 40 -     27936 TATT--TT-------T--AGTAA----A-GG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            7448 40 -     17152 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38827172 40 +  39242232 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226680 40 -  21565898 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43799 40 -     53127 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        4049 40 +     13442 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       18595 40 -     27947 TATC--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1620 40 +     10558 TATT--TT-------T--AGTAA----A-GG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4629 40 +     14005 TATT--TT-------T--AGTAA----A-GG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1859 40 -     17098 TATT--TT-------T--AATAA----A-AG-CA-TTCAATATGGAT---------------TGTACACAGTG
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1735 40 +     17877 TATT--TT-------T--AATAA----A-AG-CA-TTCAATATGGAT---------------TGTACACAGTG
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            159302 40 -    216457 TATT--TT-------T--AATAA----A-AG-CA-TTCAATATGGAT---------------TGTACACAGTG
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63773 40 +     76511 TATT--TT-------T--AATAA----A-AG-CA-TTCAATATGGAT---------------TGTACACAGTG
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chiropotes_israelita.k141_747660                          100379 40 +    146308 TATT--TT-------T--AATAA----A-AG-TA-TACAATATGGAT---------------TGTACACAGTG
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          32186 40 -     50570 TATT--TT-------T--AATAA----A-AG-TA-TACAATATGGAT---------------TGTACACAGTG
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18432499 40 -  18827391 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATACGGAT---------------TGTGTACAGTG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       18996 40 -     50209 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATACGGAT---------------TGTGTACAGTG
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135426000 40 + 135778131 tatt--tt-------t--agtaa----a-tg-ta-tTCAATACGGAT---------------TGTGTACAGTG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1914501 40 +   2368649 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952749 40 + 200372422 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              41022 40 +     84244 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           2393 30 +     23735 C-----TT-------T--AATTA----T-AG-CA-GCCAATATTAAC---------------CATA-------
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 I 8
s Cricetomys_gambianus.CriGam_scaffold_18520                 52753 29 +     63868 T-----TT-------T--AAGGG----A-AG-TA-GTCAGTGATGAC---------------CAT--------
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 2
s Cryptoprocta_ferox.CryFer_flattened_line_16129             30521 30 -     87169 T-----TT-------T--AATGA----T-AC-TG-TCTAATACTGAT---------------CACC-------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 1 I 8
s Delphinapterus_leucas.KZ290073.1                        16813840 30 +  35494412 t-----tt-------t--aatga----t-ag-tg-gtgaatattgat---------------caca-------
i Delphinapterus_leucas.KZ290073.1                       C 0 I 8
s Eidolon_helvum.AWHC01278734.1                                604 30 +      2334 t-----tt-------t--aatta----c-ag-ca-gTCAATATTGAC---------------CATG-------
i Eidolon_helvum.AWHC01278734.1                          C 0 I 8
s Elaphurus_davidianus.JRFZ01104969.1                       313967 30 +    607251 t-----tt-------t--aatga----t-ag-tg-gtcaatattgac---------------cacg-------
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 8
s Ellobius_lutescens.LOEQ01008920.1                          23249 34 -    110024 A-----TC-------T--AAAGAGTC-TAAG-CA-GTCAGTGGTGAG---------------TAAC-------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 8
s Ellobius_talpinus.LOJH01081419.1                            3170 34 +      8657 G-----TT-------T--AAAGAGTC-TAAG-TA-GTCAGTGGTGAG---------------TAAC-------
i Ellobius_talpinus.LOJH01081419.1                       C 0 I 8
s Eptesicus_fuscus.JH977646.1                              2149104 31 -  14770903 t----ttt-------t--aatga----c-ag-ca-gctggtattgac---------------cgtg-------
i Eptesicus_fuscus.JH977646.1                            I 5 I 8
s Erythrocebus_patas.Contig38                             21209171 40 -  21539334 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           13269 30 +    133382 T-----TT-------T--AATGA----T-AG-TG-GTGAAtattgac---------------cacg-------
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 8
s Eubalaena_japonica.EubJap_flattened_line_31514             27215 30 -     44125 T-----TT-------T--AATGA----T-AG-TG-GTGAATATTGAC---------------CACA-------
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 I 8
s Felis_catus.CM001381.2                                  20239086 30 + 206538554 T-----TT-------T--GAtga----t-aa-tg-gctaatactgac---------------tgtg-------
i Felis_catus.CM001381.2                                 C 0 I 8
s Felis_catus_fca126.CM031415.1                           20197961 30 + 205367284 t-----tt-------t--gatga----t-aa-tg-gctaatactgac---------------tgtg-------
i Felis_catus_fca126.CM031415.1                          C 0 I 8
s Felis_nigripes.FelNig_flattened_line_20823                 11621 30 -     36744 T-----TT-------T--GATGA----T-AA-TG-GCTAATACTGAC---------------TGTG-------
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 8
s Galeopterus_variegatus.GalVar_scaffold_108840               4647 45 -      9135 T-----TT-------T--AACAA----T-AG-CA-GTGAATATATATATAATATATAGTAGACATG-------
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 I 8
s Giraffa_tippelskirchi.LVKQ01S007888.1                     611202 30 -    660261 T-----TT-------T--AGtga----t-ag-tg-gtcaatattgac---------------catg-------
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 I 8
s Glis_glis.GliGli_scaffold_19807                            33354 30 +     49224 T-----TT-------T--AAtga----t-ac-ta-gtcaatattgat---------------tgtg-------
i Glis_glis.GliGli_scaffold_19807                        C 0 I 8
s Gorilla_beringei.k141_3596273                              20006 40 -     32273 TATT--TT-------T--AATAA----A-TG-TA-TTTAATATGGAT---------------TGTGTACAGTG
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186342142 40 + 186649187 tatt--tt-------t--aataa----a-tg-ta-tttaatatggAT---------------TGTGTACAGTG
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   35362 31 +     78134 T-----TT-------T--AATGA----T-AC-TAAGTCAATATTGAT---------------CATA-------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 5
s Helogale_parvula.HelPar_flattened_line_2585               244329 30 +    327341 T-----TT-------T--AATGA----T-AG-TG-ACTAATACTGAC---------------CGCG-------
i Helogale_parvula.HelPar_flattened_line_2585            I 1 I 8
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 21801 30 +     36099 t-----tt-------t--aatga----t-ag-tg-gacaatattgac---------------catg-------
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 I 8
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112700 30 +    128679 T-----TT-------T--AATGA----T-AA-TG-GTCAATATTGAC---------------CATG-------
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 I 8
s Hipposideros_armiger.JXIK01000431.1                       112447 23 +   1711038 t-----tt-------t--aatga----t-ag-cA-GTCAATA----------------------TG-------
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 8
s Hipposideros_galeritus.HipGal_scaffold_101188               1013 23 +      9903 T-----TT-------C--AATGA----T-AC-AA-GTCAATA----------------------Cg-------
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 I 8
s Hoolock_leuconedys.ctg274                                    438802 40 +    630532 TATT--TT-------T--AACAA----A-TG-TA-TTTAATATGGAT---------------TGTGTACAGTG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  47076 30 +     55795 T-----TT-------T--AATGA----T-AG-TG-GCTAATACTGAC---------------GCCG-------
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 1 I 8
s Ictidomys_tridecemlineatus.JH393364.1                    7522997 30 -   7955117 C-----GT-------T--CTTAA----T-AC-TA-ATCAATATAGAT---------------TATG-------
i Ictidomys_tridecemlineatus.JH393364.1                  I 4 I 18
s Inia_geoffrensis.IniGeo_flattened_line_34779                1046 30 -     31341 T-----TT-------T--AATGA----T-AG-TG-TGGAATATTGAC---------------CACA-------
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 I 8
s Kogia_breviceps.KogBre_flattened_line_81059                  792 30 -     18011 T-----TT-------C--AATGA----T-AG-TG-GTGAAtattgac---------------cacg-------
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 I 8
s Lagothrix_lagothricha.k141_1005387                         16438 40 -     38430 TATT--TT-------T--AATAA----A-AT-TA-TTCAATATGGAT---------------TGTATTCAGTG
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    18811 30 -     42476 T-----TT-------T--AATGA----C-AG-CG-GTTGGCATCGAC---------------CGTG-------
i Lasiurus_borealis.LasBor_scaffold_32767                I 5 I 30
s Lipotes_vexillifer.KE559953.1                             270101 30 -    662738 t-----tt-------t--aatga----t-ag-tg-gtgaatattgac---------------cacg-------
i Lipotes_vexillifer.KE559953.1                          C 0 I 8
s Lophocebus_aterrimus.ctg367                              1441128 39 +   1826925 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGT-CAGTG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                              10940 39 +     40492 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGT-CAGTG
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59680194 39 +  60120075 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGT-CAGTG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16711 39 -     26193 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGT-CAGTG
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            84487 39 -    114318 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGT-CAGTG
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 10178 39 -     23192 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGT-CAGTG
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19642 39 -     29190 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGT-CAGTG
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  28220 39 +     37952 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGT-CAGTG
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186843297 39 + 187317192 tatt--tt-------t--agtaa----a-tg-ta-tTCAATATGGAT---------------TGTGT-CAGTG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461875 39 -  25927173 tatt--tt-------t--agtaa----a-tg-ta-tTCAATATGGAT---------------TGTGT-CAGTG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  84076 39 +     89720 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGT-CAGTG
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                11069 39 +     20474 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGT-CAGTG
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10866 39 -     14993 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGT-CAGTG
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333728 39 -    668171 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGT-CAGTG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 9178 39 -     24072 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGT-CAGTG
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29809 39 -     45290 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGT-CAGTG
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92763 30 +     94391 T-----tt-------t--aatta----t-ag-ca-gtcaatattgac---------------catg-------
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 8
s Mandrillus_leucophaeus.scaffold280                      23941397 39 -  24302211 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATACGGAT---------------TGTGT-CAGTG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355512 39 +    752769 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATACGGAT---------------TGTGT-CAGTG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33105288 30 -  40650429 C-----GT-------T--Cttaa----t-ac-ta-atcaatatagat---------------tatg-------
i Marmota_marmota.CZRN01000018.1                         I 4 I 18
s Megaderma_lyra.MegLyr_scaffold_4542                        15339 29 -    207569 T-----TT-------T--AGTGA----C-AG-CA-GTCAAGAGTGAC---------------CAT--------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 35510 30 +    140813 T-----TT-------T--AAGGA----T-AG-TT-GTCAGTGATGAT---------------CATG-------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 8
s Mesoplodon_bidens.MesBid_scaffold_108144                    5484 30 +     10310 T-----TT-------T--AATGA----T-AG-TG-GTGAAtattgac---------------cacg-------
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 I 8
s Miniopterus_natalensis.LDJU01000034.1                    1852311 30 +   8254450 t-----gt-------t--aatgc----t-tT-CA-GTcaacattgac---------------catg-------
i Miniopterus_natalensis.LDJU01000034.1                  I 3 I 8
s Miniopterus_schreibersii.MinSch_scaffold_18080             35995 30 +     64694 T-----GT-------T--AATGC----T-TT-CA-GTcaacattgac---------------catg-------
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 3 I 8
s Miopithecus_ogouensis.k141_534055                          13077 40 -     28506 TATT--TT-------T--AGTAG----A-TG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    29225 30 -    437263 T-----TT-------T--AATGA----T-AG-TG-GTGAATATTGAT---------------CACA-------
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 8
s Moschus_moschiferus.MosMos_scaffold_13123                   3248 30 +     82753 T-----TT-------T--AATGA----T-AG-TG-GTCAATATTGAC---------------CATG-------
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 8
s Murina_feae.MurFea_scaffold_85699                           9059 31 +     14753 C----TTT-------T--AAtga----t-ag-ca-gtcaacattgac---------------catg-------
i Murina_feae.MurFea_scaffold_85699                      I 1 I 8
s Mus_caroli.LT608237.1                                   84363879 30 - 120012414 C-----TT-------T--AATGA----T-AG-TA-TTCATTGATGAT---------------CAGG-------
i Mus_caroli.LT608237.1                                  C 0 I 8
s Mus_musculus.chr8                                       87653379 30 - 129401213 T-----TT-------T--AAGGA----T-AG-TA-TTCATTGATGAT---------------CACG-------
i Mus_musculus.chr8                                      C 0 I 8
s Mus_pahari.LT608297.1                                   31358104 30 -  89631738 T-----TT-------T--AAGGA----T-AG-TA-TTCATTGATGAT---------------CACG-------
i Mus_pahari.LT608297.1                                  C 0 I 8
s Mus_spretus.CM004101.1                                  90755868 30 - 130317789 T-----TT-------T--AAGGA----T-AG-TA-TTCATTGATGAT---------------CACG-------
i Mus_spretus.CM004101.1                                 C 0 I 8
s Muscardinus_avellanarius.MusAve_scaffold_82313              6841 30 +     14296 T-----TT-------T--AATGA----T-AC-TA-GTCAATATTGAT---------------TGCG-------
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 8
s Myotis_brandtii.KE162005.1                                282809 30 -  10118263 t-----tt-------t--aatga----t-ag-ca-gtcggcattgac---------------catg-------
i Myotis_brandtii.KE162005.1                             I 5 I 8
s Myotis_davidii.KB100139.1                                1590127 30 -   6019432 t-----tt-------t--aatga----t-ag-ca-gtcggcattgac---------------catg-------
i Myotis_davidii.KB100139.1                              I 5 I 8
s Myotis_lucifugus.GL429869.1                              3906239 30 -   4330536 t-----tt-------t--aatga----c-ag-ca-gtcggcattgac---------------catg-------
i Myotis_lucifugus.GL429869.1                            I 5 I 8
s Myotis_myotis.MyoMyo_scaffold_44643                          541 30 +     25416 T-----TT-------T--CAtga----t-ag-ca-gtcggcattgac---------------catg-------
i Myotis_myotis.MyoMyo_scaffold_44643                    I 5 I 8
s Nannospalax_galili.KL204047.1                            2038962 28 -   3037898 -------T-------T--AAGCA----T-GG-TA-GTCAATGTTGAT---------------CATG-------
i Nannospalax_galili.KL204047.1                          I 52 I 8
s Nasalis_larvatus.k141_413338                               19127 40 +     21681 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5868188 30 +   7148211 T-----TT-------T--AAtga----t-ag-tg-gtgaatattgat---------------caca-------
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 8
s Ochotona_princeps.JH802162.1                             1366975 30 +   3988456 T-----TT-------T--TATGA----C-AG-TA-ATCAATAATAAC---------------CACA-------
i Ochotona_princeps.JH802162.1                           C 0 I 8
s Odocoileus_virginianus.KZ100018.1                         146769 30 +    630418 t-----tt-------t--aatga----t-ag-tg-GTCAATATTGAC---------------CATG-------
i Odocoileus_virginianus.KZ100018.1                      C 0 I 8
s Okapia_johnstoni.LVCL01S0005463.1                          79088 30 -    150152 T-----TT-------T--AAtga----t-ag-tg-gtcaatattgac---------------catg-------
i Okapia_johnstoni.LVCL01S0005463.1                      I 4 I 8
s Ondatra_zibethicus.OndZib_scaffold_7387                      343 34 +    140218 G-----TC-------T--AAGGAGTT-TAAG-CA-GTCAGGGGTGAG---------------TATT-------
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 9
s Onychomys_torridus.OnyTor_scaffold_2986                    83290 20 +    102263 -----------------------------AG-TA-GTCAGTGATGAT---------------TATG-------
i Onychomys_torridus.OnyTor_scaffold_2986                I 12 I 8
s Orcinus_orca.KB316932.1                                  2784081 30 -  10937097 t-----tt-------t--aatga----t-ag-tg-gtgaatattgat---------------caca-------
i Orcinus_orca.KB316932.1                                C 0 I 8
s Ovis_aries.CM001607.2                                   17589552 30 +  44047080 t-----tt-------t--aatga----t-ag-tg-GACAATATTGAC---------------CATG-------
i Ovis_aries.CM001607.2                                  C 0 I 8
s Ovis_canadensis.OviCan_scaffold_2572                      177754 30 -    191736 T-----TT-------T--AATGA----T-AG-TG-GACAATATTGAC---------------CATG-------
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 I 8
s Pan_paniscus.KQ411613.1                                    48107 40 +     80009 tatt--tt-------t--aataa----a-tg-ta-tttaatatggAT---------------TGTGTACAGTG
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03002948.1                             24035 41 +     28717 tatt--tt-------tt-aataa----a-tg-ta-tttaatatggAT---------------TGTGTACAGTG
i Pan_troglodytes.NBAG03002948.1                         C 0 I 403
s Panthera_onca.PanOnc_flattened_line_3271                  153156 31 +    230217 T----TTT-------T--AATGA----T-AA-TG-GCTAATACTGAC---------------TGTG-------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 8
s Panthera_pardus.KV860321.1                                266467 31 +  18783137 t----ttt-------t--aatga----t-aa-tg-gctaatactgac---------------tgtg-------
i Panthera_pardus.KV860321.1                             C 0 I 8
s Panthera_tigris.KE722367.1                               4723293 30 -   8748460 t-----tt-------t--aatga----t-aa-tg-gctaatactgac---------------tgtg-------
i Panthera_tigris.KE722367.1                             C 0 I 8
s Pantholops_hodgsonii.KE114653.1                          1268487 30 -   2937107 t-----tt-------t--aatga----t-ag-tg-gtcaatattgac---------------catg-------
i Pantholops_hodgsonii.KE114653.1                        C 0 I 8
s Papio_anubis.CM001495.2                                183447201 39 + 183742232 tatt--tt-------t--agtaa----a-tg-ta-tTCAATATGGAT---------------TGTGT-CAGTG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10851 39 +     20448 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGT-CAGTG
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567659 39 +  20919399 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGT-CAGTG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   9591 39 +     41871 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGT-CAGTG
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12884 39 +     27711 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGT-CAGTG
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3883 39 -     11374 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGT-CAGTG
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14598 30 -     78924 T-----TT-------T--AATGA----T-AG-TA-GTTAATACTGAC---------------CGTG-------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 8
s Peromyscus_maniculatus.KI615324.1                       18214015 35 -  18517816 A---ATTT-------T--AAGGA-TAGT-AG-TA-GTCAGTGATGAT---------------TATG-------
i Peromyscus_maniculatus.KI615324.1                      I 15980 I 8
s Phocoena_phocoena.PhoPho_flattened_line_24159              11150 30 +     63832 T-----TT-------T--AATGA----T-AG-TG-GTGAATATTGAT---------------CACA-------
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 8
s Piliocolobus_badius.k141_1142974                            2205 40 +     68526 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        42350 40 +     89929 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGTACAATG
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43764 40 +     51399 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGTACAATG
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14300001 40 -  14605196 tatt--tt-------t--agtaa----a-tg-ta-tTCAATATGGAT---------------TGTGTACAATG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3879 30 +     22620 T-----TT-------T--AATGA----C-AG-CA-GCTGGCATTGAC---------------CATG-------
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 8 I 7
s Pithecia_albicans.k141_1476471                              5650 40 +     26961 TATT--TT-------T--AATAA----A-AG-TA-TACAATATGGAT---------------TGTACACAGTG
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1778 40 +     23417 TATT--TT-------T--AATAA----A-AG-TA-TACAATATGGAT---------------TGTACACAGTG
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                5642 40 +     29694 TATT--TT-------T--AATAA----A-AG-TA-TACAATATGGAT---------------TGTACACAGTG
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          30668 40 +     52772 TATT--TT-------T--AATAA----A-AG-TA-TACAATATGGAT---------------TGTACACAGTG
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           5664 40 +     26198 TATT--TT-------T--AATAA----A-AG-TA-TACAATATGGAT---------------TGTACACAGTG
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3942195 40 +   4542175 TATT--TT-------T--AATAA----A-AG-TA-TACAATATGGAT---------------TGTACACAGTG
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            5628 40 -     23490 TATT--TT-------T--AATAA----A-AG-TA-TACAATATGGAT---------------TGTACACAGTG
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610            456 30 +      7680 t-----tt-------t--aatga----t-ag-tg-gtgaatattgac---------------cgtg-------
i Platanista_gangetica.PlaMin_flattened_line_173610      C 0 I 8
s Plecturocebus_bernhardi.k141_2549090                        9880 40 -     39866 TATT--TT-------T--AATAA----A-AG-CA-TTCAATATGGAT---------------TGTACACAGTG
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        19046 40 +     34906 TATT--TT-------T--AACAA----A-AG-CA-TTCAATATGGAT---------------TGTACACAGTG
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       23308 40 +     87950 TATT--TT-------T--AATAA----A-AG-CA-TTCAATATGGAT---------------TGTACACAGTG
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     24137 40 +     88961 TATT--TT-------T--AATAA----A-AG-CA-TTCAATATGGAT---------------TGTACACAGTG
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9805 40 +     39403 TATT--TT-------T--AATAA----A-AG-CA-TTCAATATGGAT---------------TGTACACAGTG
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          23589 40 -     87928 TATT--TT-------T--AATAA----A-AG-CA-TTCAATATGGAT---------------TGTACACAGTG
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         30548 40 +     60166 TATT--TT-------T--AATAA----A-AG-CA-TTCAATATGGAT---------------TGTACACAGTG
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30745 40 +     67232 TATT--TT-------T--AATAA----A-AG-CA-TTCAATATGGAT---------------TGTACACAGTG
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          26218 40 +     90634 TATT--TT-------T--AATAA----A-AG-CA-TTCAATATGGAT---------------TGTACACAGTG
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          23590 40 -     89403 TATT--TT-------T--AATAA----A-AG-CA-TTCAATATGGAT---------------TGTACACAGTG
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189135116 40 + 189387572 tatt--tt-------t--aataa----a-tg-ta-tttaatatggAT---------------TGTGTACAGTG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9574726 40 +   9816681 TATT--TT-------T--AATAA----A-TG-TA-TTTAATATGGAT---------------TGTGTACAGTG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               77304 40 -     81375 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              9121 40 +     19060 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            13143 30 -     21651 T-----TT-------T--AAGGA----T-AG-TT-GTCAGTGATGAT---------------CATG-------
i Psammomys_obesus.NESX01036370.1                        C 0 I 8
s Pteropus_alecto.KB030862.1                              22978849 30 +  28871421 t-----tt-------t--aatta----t-ag-ca-gtcaatattgac---------------catg-------
i Pteropus_alecto.KB030862.1                             C 0 I 8
s Pteropus_vampyrus.KN525825.1                             1361850 30 +   4952924 t-----tt-------t--aatta----t-ag-ca-GTCAATATTGAC---------------CATG-------
i Pteropus_vampyrus.KN525825.1                           C 0 I 8
s Puma_concolor.QAVW01001104.1                            20276356 30 -  38429054 t-----tt-------t--aatga----t-aa-tg-gctaatactgac---------------tgtg-------
i Puma_concolor.QAVW01001104.1                           C 0 I 8
s Pygathrix_cinerea.k141_1153803                             19114 40 -     91421 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7613237 40 +   7812017 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             19144 40 -     72585 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  8604 30 +     55207 T-----TT-------T--AATGA----T-AG-TT-GTCAATATTGAC---------------CATG-------
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 8
s Rattus_norvegicus.chr16                                 53573473 30 +  90668790 T-----TT-------T--AAGGG----T-AG-TA-CTCATTGATGAT---------------CATG-------
i Rattus_norvegicus.chr16                                C 0 I 8
s Rhinolophus_sinicus.LVEH01000134.1                        368896 30 -   3329780 t-----tt-------t--aatga----t-ag-tg-gtcaatattgac---------------cgtg-------
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 8
s Rhinopithecus_bieti.k119_217274                            10811 40 -     11128 TATT--TT-------T--AGTAA----A-TG-TA-TTCAGTATGGAT---------------TGTGTACAGTG
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91240177 40 - 195417433 tatt--tt-------t--agtaa----a-tg-TA-TTCAGTATGGAT---------------TGTGTACAGTG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675826 40 +   7961872 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89923 30 -     96226 T-----TT-------T--AATTA----T-AG-CA-GTCAATATTGAC---------------CATG-------
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 8
s Saiga_tatarica.SaiTat_scaffold_133311                       1086 30 +      9503 T-----TT-------T--AATGA----T-AG-TG-GTCAATACTGAC---------------CATG-------
i Saiga_tatarica.SaiTat_scaffold_133311                  C 0 I 8
s Semnopithecus_entellus.k141_1672505                         3985 40 -     12572 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30837 40 +     39453 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           11341 40 +     27826 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10886 40 -     19483 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      4184 40 -     12762 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           4029 40 +     13763 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     3050 30 -     30804 T-----TT-------T--CAGAA----T-AG-TA-GTCAGTGGTGAT---------------TATG-------
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 I 8
s Spermophilus_dauricus.KZ294078.1                         1956154 30 -   3870691 t-----gt-------t--cttaa----t-aC-TA-ATCAATATAAAT---------------TATG-------
i Spermophilus_dauricus.KZ294078.1                       I 4 I 18
s Suricata_suricatta.SurSur_flattened_line_6629              20589 30 -    196729 T-----CT-------T--AATGA----T-AG-TA-ACTAATACTGGC---------------CGCG-------
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 I 8
s Sus_scrofa.CM000828.4                                    6813719 30 +  69701581 t-----tt-------t--aatga----t-ag-tg-gtcagtattgac---------------caag-------
i Sus_scrofa.CM000828.4                                  C 0 I 8
s Tadarida_brasiliensis.TadBra_scaffold_25820                13262 29 +     41958 ------TT-------T--AATGA----C-AG-TG-GTCAGCACTGAC---------------CATg-------
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 5 I 7
s Tarsius_lariang.k141_2201908                               27781 46 +     70052 TATT--GTACAATGGT--AGTAG----T-TGATA-TCAACCATGGAT---------------GGTGT--AGTG
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                2578 46 -     16117 TATT--GTACAATGGT--AGTAG----T-TGATA-TCAACCATGGAT---------------GGTGT--AGTG
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186432509 39 + 186847797 tatt--tt-------t--agtaa----a-tg-ta-tTCAATATGGAT---------------TGTGT-CAGTG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                         14923 40 -     20410 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      4046 40 -     12674 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       15031 40 +     19930 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      11433 40 -     19997 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            51574 40 -     60166 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        19037 40 -     27529 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                        669 40 +      9229 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          12571 40 -     21137 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                     671 40 +      9131 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                          635 40 -      3730 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28903 40 +     32220 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5943000 40 +   6242583 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       12252 40 +     20839 TATT--TT-------T--AGTAA----A-TG-TA-TTCAATATGGAT---------------TGTGTACAGTG
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    2500 30 +     27266 T-----TT-------T--AACGG----T-CG-TG-GTCAGTATTAAC---------------CATG-------
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 I 6
s Tupaia_chinensis.KB320699.1                              2158420 23 +   4065304 -------------------gtta----t-ag-ca-gtcagTGTTGAT---------------GA---------
i Tupaia_chinensis.KB320699.1                            I 3 I 709
s Tupaia_tana.TupTan_flattened_line_306982                     840 23 -      4186 -------------------ATTG----T-AG-CA-GTCAGTGTTGAT---------------GA---------
i Tupaia_tana.TupTan_flattened_line_306982               I 3 I 704
s Tursiops_truncatus.MRVK01000835.1                       15740334 30 +  33153633 T-----TT-------T--AAtga----t-ag-tg-gtgaatattgat---------------caca-------
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 8
s Vicugna_pacos.KN270157.1                                 5373998 30 -   5488506 t-----tt-------t--aatca----t-ag-tG-GTCAAAATTGGC---------------CATT-------
i Vicugna_pacos.KN270157.1                               C 0 I 8
s Xerus_inauris.XerIna_scaffold_2302                          3170 30 +    224448 T-----GT-------T--CTTTA----T-AC-TA-ATCAGAATTGAT---------------CATG-------
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 18
s Zapus_hudsonius.ZapHud_scaffold_11398                      16705 30 +     63895 T-----TT-------T--AAGAC----T-AA-TA-GTGAGTATTGTT---------------CATG-------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 8
s Ziphius_cavirostris.ZipCav_flattened_line_761354             639 30 -      1267 T-----TT-------T--AATGA----T-AG-TG-GTGAATATTGAC---------------CACG-------
i Ziphius_cavirostris.ZipCav_flattened_line_761354       C 0 I 8
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 12841 537 -     43706 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Uropsilus_gracilis.UroGra_scaffold_12083                   54925 394 -     77625 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tonatia_saurophila.TonSau_scaffold_294                     83098  2 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_85600                    4490  2 +     18632 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              107540  0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    389823 643 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      121344 643 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Sorex_araneus.JH798187.1                                13652641 429 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    154809 432 -    313613 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Pteronotus_parnellii.KE909381.1                            16825  2 -     21811 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Petromus_typicus.PetTyp_scaffold_221660                      871  0 -      2102 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Otocyon_megalotis.JAEUCK010005147.1                       464401 867 -    559221 I
e Oryctolagus_cuniculus.CM000791.1                        67149665 1414 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Octodon_degus.JH651603.1                                  749928  0 +  11899542 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9151314 530 -   9404916 I
e Noctilio_leporinus.NocLep_scaffold_251                    759530  2 +    783361 I
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     73439  0 -     80779 C
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 143344  2 -    366855 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                17753  2 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184611 154 -  29670104 I
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Manis_pentadactyla.KN006162.1                              53022 987 -    317179 I
e Manis_javanica.JSZB01003497.1                              20877 990 +    737560 I
e Lycaon_pictus.CM007581.1                                17957377 535 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     8427 743 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Jaculus_jaculus.JH725527.1                               8278673 121 -   9596543 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hystrix_cristata.HysCri_scaffold_5660                      85084  0 +    135385 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23782  0 -    143317 C
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20664158  0 +  22651954 C
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Fukomys_damarensis.KN121974.1                             852512  0 +   3816255 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               35993 651 +    498745 I
e Equus_caballus.CM000403.2                               18533964 651 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1286155 651 +   4378816 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 35526  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    38384  0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    8624 649 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  675871 642 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8632007  2 +  20541912 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            69437  2 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_15900             2011  0 -     75252 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  38182  0 +     51376 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Crocidura_indochinensis.CroInd_scaffold_239572              3398  0 -      5012 I
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Condylura_cristata.JH655891.1                           17549953 974 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1254902  0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            6415  2 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5047 647 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                       102948  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18364066  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18351806  0 -  23392119 C
e Carollia_perspicillata.CarPer_scaffold_92756                7006  2 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                    3253  0 -     12242 C
e Canis_lupus_orion.HG994398.1                            18502439 535 +  63665305 I
e Canis_lupus_familiaris.chr16                            17961137 535 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9036666 537 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     1966 535 -     43241 I
e CanFam4.chr16                                           17801223 537 -  60362399 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6662  2 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Anoura_caudifer.AnoCau_scaffold_1412                      187255  2 +    412891 I
e Allactaga_bullata.AllBul_scaffold_9566                     75924 121 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T

a score=0.000000
s hg38.chrUn_KI270753v1                                      10801 17 +     62944 AA--ATGCTCATT--C-TT-G--------TG
s Acinonyx_jubatus.LLWD01001279.1                           829380 22 -   1699592 AA--ATACTCATT--C-TT-A--CTCT-CAA
i Acinonyx_jubatus.LLWD01001279.1                        I 8 I 5
s Acomys_cahirinus.AcoCah_scaffold_12655                     73518 24 +     87051 AAACCC--TGGCTTCC-CC-AT-A--GCCAG
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 8 C 0
s Allenopithecus_nigroviridis.k141_3361533                   18669 17 -     52922 AA--ATACTCATT--C-TT-G--------TG
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         18606 17 -     28001 AA--ATACTCATT--C-TT-G--------TG
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          9101 17 -     18505 AA--ATACTCATT--C-TT-G--------TG
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9954 17 -     12518 AA--ATACTCATT--C-TT-G--------TG
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_palliata.k141_2135620                              6473 17 +     47717 AA--ATATGCATT--C-TT-A--------TG
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          679524  8 -   2318259 -------gtcatt--c-t-------------
i Ammotragus_lervia.NIVO01071767.1                       I 8 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      187257 22 +    412891 AA--TTACTCATT--C-AC-A-CACA--CTG
i Anoura_caudifer.AnoCau_scaffold_1412                   I 2 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303               803  8 -     32520 -------GTCATT--C-T-------------
i Antilocapra_americana.AntAmePen_scaffold_43303         I 2 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      14730 10 +     20879 -----------------TC-A-CACAT--TG
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 18 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6664 22 +     43469 AA--TGACTCACT--C-AC-A-CA-CT-CTG
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 2 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21210674 17 -  21539123 AA--ATATGCATT--C-TT-A--------TG
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               45470 17 -     48001 AA--ATATGCATT--C-TT-A--------TG
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 28274 17 -     30947 AA--ATATGCATT--C-TT-A--------TG
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               10046 17 -     89868 AA--ATATGCATT--C-TT-A--------TG
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              14430 17 -     40414 AA--ATATGCATT--C-TT-A--------TG
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                22319 17 +     72325 AA--ATATGCATT--C-TT-A--------TG
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15193995 13 +  23207421 aa--atacacatt--c-t-------------
i Balaenoptera_acutorostrata.KI537508.1                  I 8 C 0
s Balaenoptera_bonaerensis.DF707048.1                         4460 13 -     18090 aa--atacacgtt--c-t-------------
i Balaenoptera_bonaerensis.DF707048.1                    I 8 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    30620  8 +     34529 -------GTCATT--C-T-------------
i Beatragus_hunteri.BeaHun_scaffold_50177                I 8 C 0
s Bison_bison.KN261452.1                                    203232  8 -    288883 -------GTCATT--C-T-------------
i Bison_bison.KN261452.1                                 I 8 C 0
s Bos_indicus.CM003047.1                                  20276471  8 +  48749331 -------GTCATT--C-T-------------
i Bos_indicus.CM003047.1                                 I 8 C 0
s Bos_mutus.JH880303.1                                     1129025  8 -   1948126 -------GTCATT--C-T-------------
i Bos_mutus.JH880303.1                                   I 8 C 0
s Bos_taurus.CM000203.6                                   18087109  8 +  45695690 -------GTCATT--C-T-------------
i Bos_taurus.CM000203.6                                  I 8 C 0
s Bubalus_bubalis.KI419123.1                               2823062  8 +   4408762 -------GTCATT--C-T-------------
i Bubalus_bubalis.KI419123.1                             I 8 C 0
s Cacajao_ayresi.k141_552049                                103290 17 -    122966 AA--ATATGCATT--C-TT-A--------TG
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   62793 17 +     81800 AA--ATATGCATT--C-TT-A--------TG
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31975 17 -     95584 AA--ATATGCATT--C-TT-A--------TG
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         56076 17 -    119600 AA--ATATGCATT--C-TT-A--------TG
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10004514 14 -  17673402 aa--atattcatt--c-tc------------
i Camelus_bactrianus.KN276810.1                          I 8 C 0
s Camelus_dromedarius.KN272107.1                           2336986 14 -   7040546 aa--atattcatt--c-tc------------
i Camelus_dromedarius.KN272107.1                         I 8 C 0
s Camelus_ferus.KB017975.1                                  405284 14 -   1652518 aa--atattcatt--c-tc------------
i Camelus_ferus.KB017975.1                               I 8 C 0
s Capra_aegagrus.CM003241.1                               18833534  8 +  46296322 -------GTCATT--C-T-------------
i Capra_aegagrus.CM003241.1                              I 8 C 0
s Capra_hircus.CM004588.1                                 18064351  8 -  44709034 -------gtcatt--c-t-------------
i Capra_hircus.CM004588.1                                I 8 C 0
s Carlito_syrichta.NW_007259797.1                           157330 22 -    496798 AA--ATATTCATT--C-TC-A-CA--TACGA
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                7008 22 -     11696 AA--CTACTCCTT--C-AC-A-CACA--CTG
i Carollia_perspicillata.CarPer_scaffold_92756           I 2 C 0
s Castor_canadensis.CasCan_scaffold_2074                    139305 11 +    179628 --------------------GTGAAATACTG
i Castor_canadensis.CasCan_scaffold_2074                 I 38 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     96172 22 +    217609 aa--atactcatt--c-tc-a---cacactg
i Catagonus_wagneri.CatWag_scaffold_2839                 I 8 C 0
s Cephalopachus_bancanus.k141_1423433                         6828 22 +     31688 AA--ATATTCATT--C-TC-A-CA--TACGA
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4479624 17 +   4669795 AA--ATACTCATT--C-TT-G--------TG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        4121 17 +     17872 AA--ATACTCATT--C-TT-G--------TG
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4716 17 -     14043 AA--ATACTCATT--C-TT-G--------TG
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12811 17 +     27781 AA--ATACTCATT--C-TT-G--------TG
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12966 17 -     20310 AA--ATATTCATT--C-TT-G--------TG
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15942 17 +     29689 AA--ATATTCATT--C-TT-G--------TG
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10702 17 -     20078 AA--ATACTCATT--C-TT-G--------TG
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          18613 17 -     27936 AA--ATACTCATT--C-TT-G--------TG
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            7488 17 -     17152 AA--ATACTCATT--C-TT-G--------TG
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38827212 17 +  39242232 AA--ATACTCATT--C-TT-G--------TG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226720 17 -  21565898 AA--ATACTCATT--C-TT-G--------TG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43839 17 -     53127 AA--ATACTCATT--C-TT-G--------TG
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        4089 17 +     13442 AA--ATACTCATT--C-TT-G--------TG
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       18635 17 -     27947 AA--ATACTCATT--C-TT-G--------TG
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1660 17 +     10558 AA--ATACTCATT--C-TT-G--------TG
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4669 17 +     14005 AA--ATACTCATT--C-TT-G--------TG
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            6417 22 -      8501 AA--ATGCCTATT--C-TT-GTGCA---CTG
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       I 2 C 0
s Cheracebus_lucifer.k141_49986                               1899 17 -     17098 AA--ATGTGCATA--C-TT-A--------TG
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1775 17 +     17877 AA--ATGCGCATA--C-TT-A--------TG
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            159342 17 -    216457 AA--ATGCGCATA--C-TT-A--------TG
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63813 17 +     76511 AA--ATGCGCATA--C-TT-A--------TG
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chiropotes_israelita.k141_747660                          100419 17 +    146308 AA--ATATGCATT--C-TT-A--------TG
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          32226 17 -     50570 AA--ATATGCATT--C-TT-A--------TG
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18432539 17 -  18827391 AA--ATACTCATT--C-TT-G--------TG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       19036 17 -     50209 AA--ATACTCATT--C-TT-G--------TG
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135426040 17 + 135778131 AA--ATACTCATT--C-TT-G--------TG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1914541 17 +   2368649 AA--ATACTCATT--C-TT-G--------TG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952789 17 + 200372422 AA--ATACTCATT--C-TT-G--------TG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              41062 17 +     84244 AA--ATACTCATT--C-TT-G--------TG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17550927 22 -  53390261 aa--AGACCCATT--C-TC-A-CA--TATTG
i Condylura_cristata.JH655891.1                          I 974 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           2431 21 +     23735 A---ATACTCat---tttt-a---cacactg
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      I 8 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 52784  2 +     63868 -----------------------------AG
i Cricetomys_gambianus.CriGam_scaffold_18520             I 2 C 0
s Crocidura_indochinensis.CroInd_scaffold_792895              1027 19 +      1430 AA--ATCCTC-----C-TC-A---CTTTGTT
i Crocidura_indochinensis.CroInd_scaffold_792895         n 0 n 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             30559 22 -     87169 AA--ATACTCATT--C-CT-ACGCA---CAA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 8 I 5
s Dasypus_novemcinctus.JH564415.1                            69439 22 +   2246927 aa--atacctatt--c-tc-a---tgcattg
i Dasypus_novemcinctus.JH564415.1                        I 2 C 0
s Delphinapterus_leucas.KZ290073.1                        16813878 13 +  35494412 aa--atacacatt--c-t-------------
i Delphinapterus_leucas.KZ290073.1                       I 8 C 0
s Desmodus_rotundus.KZ672289.1                             8632009 22 +  20541912 AA--TTACTcatt--c-tc-a---cacactg
i Desmodus_rotundus.KZ672289.1                           I 2 C 0
s Eidolon_helvum.AWHC01278734.1                                642 21 +      2334 AA--ATACTCAT---C-TC-ATGCA---CTA
i Eidolon_helvum.AWHC01278734.1                          I 8 I 39
s Elaphurus_davidianus.JRFZ01104969.1                       314005  8 +    607251 -------gtcatt--c-t-------------
i Elaphurus_davidianus.JRFZ01104969.1                    I 8 C 0
s Ellobius_lutescens.LOEQ01008920.1                          23291 22 -    110024 GCACAC--TGTTT--C-CC-AT-A--CCCGG
i Ellobius_lutescens.LOEQ01008920.1                      I 8 C 0
s Ellobius_talpinus.LOJH01081419.1                            3212 22 +      8657 GCACAC--TGGTT--C-CC-AT-A--CCCGG
i Ellobius_talpinus.LOJH01081419.1                       I 8 C 0
s Eptesicus_fuscus.JH977646.1                              2149143 22 -  14770903 ag--atactcatc--c-tc-a---cacactg
i Eptesicus_fuscus.JH977646.1                            I 8 C 0
s Erythrocebus_patas.Contig38                             21209211 17 -  21539334 AA--ATACTCATT--C-TT-G--------TG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           13307 13 +    133382 aa--atacacatt--c-t-------------
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 8 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             27253 13 -     44125 AA--ATACACATT--C-T-------------
i Eubalaena_japonica.EubJap_flattened_line_31514         I 8 C 0
s Felis_catus.CM001381.2                                  20239124 22 + 206538554 aa--atactcatt--c-tt-a---ctctcaa
i Felis_catus.CM001381.2                                 I 8 I 5
s Felis_catus_fca126.CM031415.1                           20197999 22 + 205367284 aa--atactcatt--c-tt-a---ctctcaa
i Felis_catus_fca126.CM031415.1                          I 8 I 5
s Felis_nigripes.FelNig_flattened_line_20823                 11659 22 -     36744 AA--ATACTCATT--C-TT-A--CTCT-CAA
i Felis_nigripes.FelNig_flattened_line_20823             I 8 I 5
s Galeopterus_variegatus.GalVar_scaffold_108840               4700 22 -      9135 AA--ATACTCATT--C-TC-A-CA--TACTG
i Galeopterus_variegatus.GalVar_scaffold_108840          I 8 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     611240  8 -    660261 -------gtcatt--c-t-------------
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 8 C 0
s Glis_glis.GliGli_scaffold_19807                            33392 22 +     49224 aaatat--tcatt--c-tc-a---tgcacta
i Glis_glis.GliGli_scaffold_19807                        I 8 C 0
s Gorilla_beringei.k141_3596273                              20046 17 -     32273 AA--ATGCTCATT--C-TT-G--------TG
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186342182 17 + 186649187 AA--ATGCTCATT--C-TT-G--------TG
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   35398 21 +     78134 -AACAT--TCATG--C-TC-ATGCA---CTA
i Graphiurus_murinus.GraMur_scaffold_10447               I 5 C 0
s Helogale_parvula.HelPar_flattened_line_2585               244367 22 +    327341 AA--ATACTCATT--C-CT-ACGCA---CAA
i Helogale_parvula.HelPar_flattened_line_2585            I 8 I 5
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 21839  8 +     36099 -------gtcatt--c-t-------------
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 8 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112738 13 +    128679 AA--ATACTCATT--T-T-------------
i Hippopotamus_amphibius.HipAmp_scaffold_9076            I 8 C 0
s Hipposideros_armiger.JXIK01000431.1                       112478  9 +   1711038 CA--acgctca--------------------
i Hipposideros_armiger.JXIK01000431.1                    I 8 I 7
s Hipposideros_galeritus.HipGal_scaffold_101188               1044 22 +      9903 aa--acactcat---tgtc-a---tgcactg
i Hipposideros_galeritus.HipGal_scaffold_101188          I 8 C 0
s Hoolock_leuconedys.ctg274                                    438842 17 +    630532 AA--ATACTCATT--C-TT-G--------TG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  47114 22 +     55795 AA--ATACTCACT--C-CT-A-CACA--CAG
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 8 I 5
s Ictidomys_tridecemlineatus.JH393364.1                    7523045 10 -   7955117 -----------------TC-A-CACA--CTG
i Ictidomys_tridecemlineatus.JH393364.1                  I 18 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                1084 13 -     31341 aa--atacacatt--c-t-------------
i Inia_geoffrensis.IniGeo_flattened_line_34779           I 8 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                  830 13 -     18011 aa--atacacatt--c-t-------------
i Kogia_breviceps.KogBre_flattened_line_81059            I 8 C 0
s Lagothrix_lagothricha.k141_1005387                         16478 17 -     38430 AA--ATATGCATT--C-TT-A--------TG
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_50988                    17628 22 +     29960 AG--ATACTCATC--C-TC-A-CACA--CTG
i Lasiurus_borealis.LasBor_scaffold_50988                I 204 I 202
s Lipotes_vexillifer.KE559953.1                             270139 13 -    662738 aa--atacacatt--c-t-------------
i Lipotes_vexillifer.KE559953.1                          I 8 C 0
s Lophocebus_aterrimus.ctg367                              1441167 17 +   1826925 AA--ATACTCATT--C-TT-G--------TG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                              10979 17 +     40492 AA--ATACCCATT--C-TT-G--------TG
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59680233 17 +  60120075 AA--ATACCCATT--C-TT-G--------TG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16750 17 -     26193 AA--ATACCCATT--C-TT-G--------TG
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            84526 17 -    114318 AA--ATACCCATT--C-TT-G--------TG
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 10217 17 -     23192 AA--ATACCCATT--C-TT-A--------TG
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19681 17 -     29190 AA--ATACCCATT--C-TT-G--------TG
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  28259 17 +     37952 AA--ATACCCATT--C-TT-G--------TG
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186843336 17 + 187317192 AA--ATACCCATT--C-TT-G--------TG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461914 17 -  25927173 AA--ATACCCATT--C-TT-G--------TG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  84115 17 +     89720 AA--ATACCCATT--C-TT-G--------TG
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                11108 17 +     20474 AA--ATACCCATT--C-TT-G--------TG
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10905 17 -     14993 AA--ATACCCATT--C-TT-G--------TG
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333767 17 -    668171 AA--ATACCCATT--C-TT-G--------TG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 9217 17 -     24072 AA--ATACCCATT--C-TT-G--------TG
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29848 17 -     45290 AA--ATACCCATT--C-TT-G--------TG
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92801 21 +     94391 aa--atactcat---c-tc-a---tgcactg
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 8 C 0
s Mandrillus_leucophaeus.scaffold280                      23941436 17 -  24302211 AA--ATACTCATT--C-TT-G--------TG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355551 17 +    752769 AA--ATACTCATT--C-TT-G--------TG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33105336 10 -  40650429 -----------------tc-a---catactg
i Marmota_marmota.CZRN01000018.1                         I 18 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        15368  7 -    207569 ------ACTCAT---T---------------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 35548 22 +    140813 AAACAC--TGGTT--C-CT-AT-A--CCCAG
i Meriones_unguiculatus.MerUng_scaffold_7390             I 8 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    5522 13 +     10310 aa--atacacatt--c-t-------------
i Mesoplodon_bidens.MesBid_scaffold_108144               I 8 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                17755 22 -     19307 AA--TTACTCatt--c-tc-a---cacactg
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 2 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1852349 22 +   8254450 aa--atattcatc--c-tc-a---cacactg
i Miniopterus_natalensis.LDJU01000034.1                  I 8 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             36033 22 +     64694 aa--atattcatc--c-tc-a---cacactg
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 8 C 0
s Miopithecus_ogouensis.k141_534055                          13117 17 -     28506 AA--ATACTCATT--C-TT-G--------TG
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    29263 13 -    437263 AA--ATACACATT--C-T-------------
i Monodon_monoceros.MonMon_M_scaffold_103                I 8 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 143346 20 -    366855 AA--ATACTC-----C-TC-A-CACA-ACCG
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 2 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   3286  8 +     82753 -------GACATT--C-T-------------
i Moschus_moschiferus.MosMos_scaffold_13123              I 8 C 0
s Murina_feae.MurFea_scaffold_85699                           9098 22 +     14753 ag--atagtcatc--c-tc-a---cacactg
i Murina_feae.MurFea_scaffold_85699                      I 8 C 0
s Mus_caroli.LT608237.1                                   84363917 13 - 120012414 G-----------T--C-CC-AT-ACA--CAG
i Mus_caroli.LT608237.1                                  I 8 C 0
s Mus_musculus.chr8                                       87653417 13 - 129401213 A-----------T--C-CT-AT-ACA--CAA
i Mus_musculus.chr8                                      I 8 C 0
s Mus_pahari.LT608297.1                                   31358142 13 -  89631738 A-----------T--C-CC-AT-ACA--CAG
i Mus_pahari.LT608297.1                                  I 8 C 0
s Mus_spretus.CM004101.1                                  90755906 13 - 130317789 A-----------T--C-CC-AT---acacaa
i Mus_spretus.CM004101.1                                 I 8 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              6879 22 +     14296 AAACAT--TCGTT--C-TC-ATG---TGCTA
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 8 C 0
s Myotis_brandtii.KE162005.1                                282847 22 -  10118263 ag--atactcatc--c-tc-a---cacgctg
i Myotis_brandtii.KE162005.1                             I 8 C 0
s Myotis_davidii.KB100139.1                                1590165 22 -   6019432 ag--atactcatc--c-tc-a---cacactg
i Myotis_davidii.KB100139.1                              I 8 C 0
s Myotis_lucifugus.GL429869.1                              3906277 22 -   4330536 ag--atactcatc--c-tc-a---cacgctg
i Myotis_lucifugus.GL429869.1                            I 8 C 0
s Myotis_myotis.MyoMyo_scaffold_44643                          579 22 +     25416 ag--atactcatc--c-tc-a---cacactg
i Myotis_myotis.MyoMyo_scaffold_44643                    I 8 C 0
s Nannospalax_galili.KL204047.1                            2038998 22 -   3037898 AAACAC--TCATT--C-CC-AT--CCT-CTG
i Nannospalax_galili.KL204047.1                          I 8 I 23
s Nasalis_larvatus.k141_413338                               19167 17 +     21681 AA--ATACTCATT--C-TT-G--------TG
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5868226 13 +   7148211 aa--atacacatt--c-t-------------
i Neophocaena_asiaeorientalis.KZ687982.1                 I 8 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    759532 22 +    783361 AA--ATGCTCGTT--C-TC-A-CACA--CTG
i Noctilio_leporinus.NocLep_scaffold_251                 I 2 C 0
s Ochotona_princeps.JH802162.1                             1367013 20 +   3988456 AA--AT--GCAGT--T-TC-TTGCA-T--TG
i Ochotona_princeps.JH802162.1                           I 8 C 0
s Odocoileus_virginianus.KZ100018.1                         146807  8 +    630418 -------GTCATT--C-T-------------
i Odocoileus_virginianus.KZ100018.1                      I 8 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          79126  8 -    150152 -------gtcatt--c-t-------------
i Okapia_johnstoni.LVCL01S0005463.1                      I 8 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                      386 22 +    140218 GTGCAC--TGGTT--C-CC-AT-ACCT--AG
i Ondatra_zibethicus.OndZib_scaffold_7387                I 9 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    83318 22 +    102263 AAGCCC--TGGTT--C-CC-ATG---CCCAG
i Onychomys_torridus.OnyTor_scaffold_2986                I 8 C 0
s Orcinus_orca.KB316932.1                                  2784119 13 -  10937097 aa--atacacatt--c-t-------------
i Orcinus_orca.KB316932.1                                I 8 C 0
s Ovis_aries.CM001607.2                                   17589590  8 +  44047080 -------GTCATT--C-T-------------
i Ovis_aries.CM001607.2                                  I 8 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      177792  8 -    191736 -------GTCATT--C-T-------------
i Ovis_canadensis.OviCan_scaffold_2572                   I 8 C 0
s Pan_paniscus.KQ411613.1                                    48147 17 +     80009 AA--ATGCTCATT--C-TT-G--------TG
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189147002 17 + 189151597 AA--ATGCTCATT--C-TT-G--------TG
i Pan_troglodytes.CM009242.2                             I 46 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  153195 22 +    230217 AA--ATACTCATT--C-TT-A--CCCT-CAA
i Panthera_onca.PanOnc_flattened_line_3271               I 8 I 5
s Panthera_pardus.KV860321.1                                266506 22 +  18783137 aa--atactcatt--c-tt-a---ccctcaa
i Panthera_pardus.KV860321.1                             I 8 I 5
s Panthera_tigris.KE722367.1                               4723331 22 -   8748460 aa--atactcatt--c-tt-a---ccctcaa
i Panthera_tigris.KE722367.1                             I 8 I 5
s Pantholops_hodgsonii.KE114653.1                          1268525  8 -   2937107 -------gtcatt--c-t-------------
i Pantholops_hodgsonii.KE114653.1                        I 8 C 0
s Papio_anubis.CM001495.2                                183447240 17 + 183742232 AA--ATACTCATT--C-TT-G--------TG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10890 17 +     20448 AA--ATACTCATT--C-TT-G--------TG
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567698 17 +  20919399 AA--ATACTCATT--C-TT-G--------TG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   9630 17 +     41871 AA--ATACTCATT--C-TT-G--------TG
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12923 17 +     27711 AA--ATACTCATT--C-TT-G--------TG
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3922 17 -     11374 AA--ATACTCATT--C-TT-G--------TG
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14636 22 -     78924 AA--ATACTCATT--C-CT-A-CACA--CAA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 8 I 5
s Peromyscus_maniculatus.KI615324.1                       18214058 22 -  18517816 AGGCAC--TGGTT--C-CC-ATG---CCCAG
i Peromyscus_maniculatus.KI615324.1                      I 8 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              11188 13 +     63832 AA--ATACACATT--C-T-------------
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 8 C 0
s Piliocolobus_badius.k141_1142974                            2245 17 +     68526 AA--ATACTCATT--C-TC-G--------TG
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        42390 17 +     89929 AA--ATACTCATT--C-TT-G--------TG
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43804 17 +     51399 AA--ATACTCATT--C-TT-G--------TG
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14300041 17 -  14605196 AA--ATACTCATT--C-TT-G--------TG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3916 22 +     22620 AG--ATACTcatc--c-cc-a---cacactg
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 7 C 0
s Pithecia_albicans.k141_1476471                              5690 17 +     26961 AA--ATATGCATT--C-TT-A--------TG
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1818 17 +     23417 AA--ATATGCATT--C-TT-A--------TG
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                5682 17 +     29694 AA--ATATGCATT--C-TT-A--------TG
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          30708 17 +     52772 AA--ATATGCATT--C-TT-A--------TG
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           5704 17 +     26198 AA--ATATGCATT--C-TT-A--------TG
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3942235 17 +   4542175 AA--ATATGCATT--C-TT-A--------TG
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            5668 17 -     23490 AA--ATATGCATT--C-TT-A--------TG
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610            494 13 +      7680 aa--gtacacatt--c-t-------------
i Platanista_gangetica.PlaMin_flattened_line_173610      I 8 C 0
s Plecturocebus_bernhardi.k141_2549090                        9920 18 -     39866 AA--ATACGCATA--C-TTAA--------CG
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        19086 18 +     34906 AA--ATACGCATA--C-TTAA--------CG
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       23348 18 +     87950 AA--ATACGCATA--C-TTAA--------CG
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     24177 18 +     88961 AA--ATACGCATA--C-TTAA--------CG
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9845 18 +     39403 AA--ATACGCATA--C-TTAA--------CG
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          23629 18 -     87928 AA--ATACGCATA--C-TTAA--------CG
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         30588 18 +     60166 AA--ATACGCATA--C-TTAA--------CG
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30785 18 +     67232 AA--ATACGCATA--C-TTAA--------CG
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          26258 18 +     90634 AA--ATACGCATA--C-TTAA--------CG
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          23630 18 -     89403 AA--ATACGCATA--C-TTAA--------CG
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189135156 17 + 189387572 AA--ATACTCATT--C-TT-G--------TG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9574766 17 +   9816681 AA--ATACTCATT--C-TT-G--------TG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               77344 17 -     81375 AA--ATACTCATT--C-TT-G--------TG
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              9161 17 +     19060 AA--ATACTCATT--C-TT-G--------TG
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            13181 22 -     21651 AAACAC--TGGTT--C-CT-AT-A--CCCAG
i Psammomys_obesus.NESX01036370.1                        I 8 C 0
s Pteronotus_parnellii.KE909381.1                            16827 22 -     21811 AA--GTATTCATT--C-TC-A-CAGA--CTG
i Pteronotus_parnellii.KE909381.1                        I 2 C 0
s Pteropus_alecto.KB030862.1                              22978887 21 +  28871421 aa--atactcat---c-gc-a---tgcactg
i Pteropus_alecto.KB030862.1                             I 8 C 0
s Pteropus_vampyrus.KN525825.1                             1361888 21 +   4952924 AA--ATACTCAT---C-AC-ATGCA---CTG
i Pteropus_vampyrus.KN525825.1                           I 8 I 2
s Puma_concolor.QAVW01001104.1                            20276394 22 -  38429054 aa--atactcatt--c-tt-a---ctctcaa
i Puma_concolor.QAVW01001104.1                           I 8 I 5
s Pygathrix_cinerea.k141_1153803                             19154 17 -     91421 AA--ATACTCATT--C-TT-G--------TG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7613277 17 +   7812017 AA--ATACTCATT--C-TT-G--------TG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             19184 17 -     72585 AA--ATACTCATT--C-TT-G--------TG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  8642  8 +     55207 -------GTCATT--C-T-------------
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 8 C 0
s Rattus_norvegicus.chr16                                 53573511 12 +  90668790 G-----------T--C-CC-AT-ACA--CA-
i Rattus_norvegicus.chr16                                I 8 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        368934 22 -   3329780 ca--atgctcat---tttc-a---cgcactg
i Rhinolophus_sinicus.LVEH01000134.1                     I 8 C 0
s Rhinopithecus_bieti.k119_217274                            10851 17 -     11128 AA--ATACTCATT--C-TT-G--------TG
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91240217 17 - 195417433 AA--ATACTCATT--C-TT-A--------TG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675866 17 +   7961872 AA--ATACTCATT--C-TT-G--------TG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89961 21 -     96226 AA--ATACTCAT---C-TC-ATGCA---CTG
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 8 C 0
s Saiga_tatarica.SaiTat_scaffold_133311                       1124  8 +      9503 -------GTCATT--C-T-------------
i Saiga_tatarica.SaiTat_scaffold_133311                  I 8 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    155241 22 -    313613 AA--AGACGCATT--C-TC-A-CA--TATTG
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 432 C 0
s Semnopithecus_entellus.k141_1672505                         4025 17 -     12572 AA--ATACTCATT--C-TT-G--------TG
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30877 17 +     39453 AA--ATACTCATT--C-TT-G--------TG
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           11381 17 +     27826 AA--ATACTCATT--C-TT-G--------TG
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10926 17 -     19483 AA--ATACTCATT--C-TT-G--------TG
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      4224 17 -     12762 AA--ATACTCATT--C-TT-G--------TG
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           4069 17 +     13763 AA--ATACTCATT--C-TT-G--------TG
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     3088 22 -     30804 ATACAC--TGGTC--T-CC-AT---CCCCAA
i Sigmodon_hispidus.SigHis_scaffold_42075                I 8 C 0
s Sorex_araneus.JH798187.1                                13653070 19 -  18376816 AA--ATATTC-----C-TC-A---CTTTGTA
i Sorex_araneus.JH798187.1                               I 429 C 0
s Spermophilus_dauricus.KZ294078.1                         1956202 10 -   3870691 -----------------TC-A-CACA--CTG
i Spermophilus_dauricus.KZ294078.1                       I 18 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              20627 22 -    196729 AA--ATACTCATT--C-CT-ACGCA---CAA
i Suricata_suricatta.SurSur_flattened_line_6629          I 8 I 5
s Sus_scrofa.CM000828.4                                    6813757 22 +  69701581 aa--atactcatt--c-tc-a---cacactg
i Sus_scrofa.CM000828.4                                  I 8 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                13298 22 +     41958 ca--gtactcatt--c-tc-a---cacactg
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 7 C 0
s Tarsius_lariang.k141_2201908                               27827 22 +     70052 AA--ATAATCATT--T-TC-A-CA--TACTA
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                2624 22 -     16117 AA--ATATTCATT--C-CC-A-CA--TACTA
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186432548 17 + 186847797 AA--ATACTCATT--C-TT-G--------TG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_85600                    4492 22 +     18632 AA--ATCCCTATT--C-TC-ATGCA---CTG
i Tolypeutes_matacus.TolMat_scaffold_85600               I 2 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     83100 22 +    610378 AA--GTACTCatt--c-ac-a---cacactg
i Tonatia_saurophila.TonSau_scaffold_294                 I 2 C 0
s Trachypithecus_auratus.k141_722599                         14963 17 -     20410 AA--ATACTCATT--C-TT-G--------TG
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      4086 17 -     12674 AA--ATACTCATT--C-TT-G--------TG
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       15071 17 +     19930 AA--ATACTCATT--C-TT-G--------TG
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      11473 17 -     19997 AA--ATACTCATT--C-TT-G--------TG
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            51614 17 -     60166 AA--ATACTCATT--C-TT-G--------TG
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        19077 17 -     27529 AA--ATACTCATT--C-TT-G--------TG
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                        709 17 +      9229 AA--ATACTCATT--C-TT-G--------TG
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          12611 17 -     21137 AA--ATACTCATT--C-TT-G--------TG
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                     711 17 +      9131 AA--ATACTCATT--C-TT-G--------TG
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                          675 17 -      3730 AA--ATACTCATT--C-TT-G--------TG
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28943 17 +     32220 AA--ATACTCATT--C-TT-G--------TG
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5943040 17 +   6242583 AA--ATACTCATT--C-TT-G--------TG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       12292 17 +     20839 AA--ATACTCATT--C-TT-G--------TG
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    2536  8 +     27266 -------GTCATT--C-T-------------
i Tragulus_javanicus.TraJav_scaffold_40725               I 6 C 0
s Tupaia_chinensis.KB320699.1                              2159152 22 +   4065304 AA--CTACTTGTT--T-TC-A-CA--TACTT
i Tupaia_chinensis.KB320699.1                            I 709 C 0
s Tupaia_tana.TupTan_flattened_line_306982                    1567 22 -      4186 AA--CTACGTGTT--T-TC-A-CA--TACTA
i Tupaia_tana.TupTan_flattened_line_306982               I 704 C 0
s Tursiops_truncatus.MRVK01000835.1                       15740372 13 +  33153633 aa--atacacatt--c-t-------------
i Tursiops_truncatus.MRVK01000835.1                      I 8 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   55319 22 -     77625 AA--ATACACACT--T-GT-A-CA--TAGTG
i Uropsilus_gracilis.UroGra_scaffold_12083               I 394 C 0
s Vicugna_pacos.KN270157.1                                 5374036 14 -   5488506 AA--ATATTCATT--C-TC------------
i Vicugna_pacos.KN270157.1                               I 8 I 5
s Xerus_inauris.XerIna_scaffold_2302                          3218 10 +    224448 -----------------tc-a---cacactg
i Xerus_inauris.XerIna_scaffold_2302                     I 18 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      16743 20 +     63895 A--CAT--TCTCT--G-CC-AT---CTACTG
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 8 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_761354             677 13 -      1267 AA--ATACACATT--C-T-------------
i Ziphius_cavirostris.ZipCav_flattened_line_761354       I 8 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Alouatta_seniculus.k141_117119                             17657 14 +     50774 I
e Alouatta_puruensis.k141_362188                              3206 14 +      5663 I
e Alouatta_nigerrima.k141_1929159                             2484 14 +     30492 I
e Alouatta_macconnelli.k141_918386                            3526 14 -      9457 I
e Alouatta_juara.k141_1302312                                 2438 14 +     27940 I
e Alouatta_discolor.k141_566626                              13966 14 +     28687 I
e Alouatta_caraya.k141_1701091                                3513 14 -     36483 I
e Alouatta_belzebul.k141_3560514                             10406 14 +     51355 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 12841 537 -     43706 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              107540  0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    389823 643 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      121344 643 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Petromus_typicus.PetTyp_scaffold_221660                      871  0 -      2102 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Otocyon_megalotis.JAEUCK010005147.1                       464401 867 -    559221 I
e Oryctolagus_cuniculus.CM000791.1                        67149665 1414 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Octodon_degus.JH651603.1                                  749928  0 +  11899542 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9151314 530 -   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     73439  0 -     80779 C
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184611 154 -  29670104 I
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Manis_pentadactyla.KN006162.1                              53022 987 -    317179 I
e Manis_javanica.JSZB01003497.1                              20877 990 +    737560 I
e Lycaon_pictus.CM007581.1                                17957377 535 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     8427 743 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Jaculus_jaculus.JH725527.1                               8278673 121 -   9596543 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hystrix_cristata.HysCri_scaffold_5660                      85084  0 +    135385 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23782  0 -    143317 C
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20664158  0 +  22651954 C
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Fukomys_damarensis.KN121974.1                             852512  0 +   3816255 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               35993 651 +    498745 I
e Equus_caballus.CM000403.2                               18533964 651 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1286155 651 +   4378816 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 35526  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    38384  0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    8624 649 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  675871 642 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasyprocta_punctata.DasPun_flattened_line_15900             2011  0 -     75252 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  38182  0 +     51376 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1254902  0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5047 647 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                       102948  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18364066  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18351806  0 -  23392119 C
e Capromys_pilorides.CapPil_scaffold_65020                    3253  0 -     12242 C
e Canis_lupus_orion.HG994398.1                            18502439 535 +  63665305 I
e Canis_lupus_familiaris.chr16                            17961137 535 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9036666 537 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     1966 535 -     43241 I
e CanFam4.chr16                                           17801223 537 -  60362399 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Allactaga_bullata.AllBul_scaffold_9566                     75924 121 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T

a score=0.000000
s hg38.chrUn_KI270753v1                                      10818 32 +     62944 CTAGTA-AAA----GTGAATTTTAGT-----------A-A-A--A-TCATTCT
s Acinonyx_jubatus.LLWD01001279.1                           829407 16 -   1699592 ------------------ATATTGGG-----------A-A-A--A-CCAT---
i Acinonyx_jubatus.LLWD01001279.1                        I 5 I 6
s Acomys_cahirinus.AcoCah_scaffold_12655                     73542 29 +     87051 TCAGTA-ATA----ATGAATATTGGA-----------G-A-A--A-TGAG---
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   18686 32 -     52922 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         18623 32 -     28001 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          9118 32 -     18505 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                           9971 32 -     12518 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_palliata.k141_2135620                              6490 32 +     47717 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          679532 29 -   2318259 ctgata-gca----gtgtatcttgct-----------a-a-a--a-ccat---
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 6
s Anoura_caudifer.AnoCau_scaffold_1412                      187279 29 +    412891 CTGGGA-GCC----TTGTATCTTGGT-----------A-A-A--A-TCAC---
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 3
s Antilocapra_americana.AntAmePen_scaffold_43303               811 29 -     32520 GTGGTA-GCA----GTGTATCTTGGT-----------A-A-A--A-CCAT---
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 I 6
s Aplodontia_rufa.AprRuf_scaffold_68852                      14740 29 +     20879 CTAGTA-ACA----GTGGAACTTGGT-----------A-A-A--A-TAAT---
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 5
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6686 29 +     43469 CTGGGA-GCC----CTGTACCTTGGT-----------G-A-A--A-TCAC---
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 6
s Ateles_geoffroyi_b.tarseq_1536                             21210691 32 -  21539123 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               45487 32 -     48001 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 28291 32 -     30947 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               10063 32 -     89868 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              14447 32 -     40414 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                22336 32 +     72325 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15194008 29 +  23207421 ctggta-gca----gtgtatcttggt-----------a-a-a--a-ccat---
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 6
s Balaenoptera_bonaerensis.DF707048.1                         4473 29 -     18090 ctggta-gca----gtgtatcttggt-----------a-a-a--a-ccat---
i Balaenoptera_bonaerensis.DF707048.1                    C 0 I 6
s Beatragus_hunteri.BeaHun_scaffold_50177                    30628 29 +     34529 CTGGTA-GCA----GTGTATCTTGCT-----------A-A-A--A-CCAT---
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 6
s Bison_bison.KN261452.1                                    203240 29 -    288883 CTGGTA-GCA----GTGTATCTTGGT-----------A-A-A--A-CCAT---
i Bison_bison.KN261452.1                                 C 0 I 6
s Bos_indicus.CM003047.1                                  20276479 29 +  48749331 ctggta-gca----gtgtatcttggt-----------a-a-a--a-ccat---
i Bos_indicus.CM003047.1                                 C 0 I 6
s Bos_mutus.JH880303.1                                     1129033 29 -   1948126 ctggta-gca----gtgtatcttggt-----------a-a-a--a-ccat---
i Bos_mutus.JH880303.1                                   C 0 I 6
s Bos_taurus.CM000203.6                                   18087117 29 +  45695690 ctggta-gca----gtgtatcttggt-----------a-a-a--a-ccat---
i Bos_taurus.CM000203.6                                  C 0 I 6
s Bubalus_bubalis.KI419123.1                               2823070 29 +   4408762 ctggta-gca----gtgtatcttggt-----------a-a-a--a-ccat---
i Bubalus_bubalis.KI419123.1                             C 0 I 6
s Cacajao_ayresi.k141_552049                                103307 32 -    122966 CTAGTA-AAA----GTGAAGTTTGGT-----------A-A-A--A-TCATTCT
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   62810 32 +     81800 CTAGTA-AAA----GTGAAGTTTGGT-----------A-A-A--A-TCATTCT
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  31992 32 -     95584 CTAGTA-AAA----GTGAAGTTTGGT-----------A-A-A--A-TCATTCT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         56093 32 -    119600 CTAGTA-AAA----GTGAAGTTTGGT-----------A-A-A--A-TCATTCT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10004528 28 -  17673402 -cggca-gca----ctgtatcttgat-----------a-a-a--a-cctt---
i Camelus_bactrianus.KN276810.1                          C 0 I 6
s Camelus_dromedarius.KN272107.1                           2337000 28 -   7040546 -cggca-gca----ctgtatcttgat-----------a-a-a--a-cctt---
i Camelus_dromedarius.KN272107.1                         C 0 I 6
s Camelus_ferus.KB017975.1                                  405298 28 -   1652518 -cggca-gca----ctgtatcttgat-----------a-a-a--a-cctt---
i Camelus_ferus.KB017975.1                               C 0 I 6
s Capra_aegagrus.CM003241.1                               18833542 29 +  46296322 CTGATA-GCA----GTGTATCTTGCT-----------A-A-A--A-CCAT---
i Capra_aegagrus.CM003241.1                              C 0 I 6
s Capra_hircus.CM004588.1                                 18064359 29 -  44709034 ctgata-gca----gtgtatcttgct-----------a-a-a--a-ccat---
i Capra_hircus.CM004588.1                                C 0 I 6
s Carlito_syrichta.NW_007259797.1                           157352 32 -    496798 CTAGTA-ACA----GCGAATCTTGGC-----------A-A-A--G-CCATTGT
i Carlito_syrichta.NW_007259797.1                        C 0 I 1
s Carollia_perspicillata.CarPer_scaffold_92756                7030 29 -     11696 CTGGGA-GCC----CGGTACCTCGGT-----------A-A-A--A-TCGC---
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 6
s Castor_canadensis.CasCan_scaffold_2074                    139316 29 +    179628 ATACTA-ATA----ACAAATTTTGGG-----------A-A-A--A-TCAT---
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 5
s Catagonus_wagneri.CatWag_scaffold_2839                     96194 29 +    217609 ctcgta-gca----atgtatcttggt-----------a-a-a--t-ccat---
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 6
s Cephalopachus_bancanus.k141_1423433                         6850 32 +     31688 CTAGTA-ACA----GCGAATCTTGGC-----------A-A-A--G-CCATTAT
i Cephalopachus_bancanus.k141_1423433                    C 0 I 1
s Cercocebus_atys.KQ010504.1                               4479641 32 +   4669795 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        4138 32 +     17872 CTAGTA-AAA----GCGAATTTTGGT-----------A-A-A--A-TCATTCT
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4733 32 -     14043 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12828 32 +     27781 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        12983 32 -     20310 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15959 32 +     29689 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10719 32 -     20078 CTAGTA-AAA----GTGAATTTTGAT-----------A-A-A--A-TCATTCT
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          18630 32 -     27936 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCGTTCT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            7505 32 -     17152 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCGTTCT
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38827229 32 +  39242232 CTAGTA-AAA----GTGAATTTTGAT-----------A-A-A--A-TCGTTCT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226737 32 -  21565898 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCGTTCT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43856 32 -     53127 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCGTTCT
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        4106 32 +     13442 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       18652 32 -     27947 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCGTTCT
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1677 32 +     10558 CTAGTA-AAA----GTGAATTTTGAT-----------A-A-A--A-TCATTCT
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4686 32 +     14005 CTAGTA-AAA----GTGAATTTTGAT-----------A-A-A--A-TCATTCT
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            6439 30 -      8501 GTGGGA-GCA----GTGAATCTTGGT-----------A-AAA--A-CCTT---
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 I 5
s Cheracebus_lucifer.k141_49986                               1916 32 -     17098 CTAATA-AAA----GTGAAGTTTGGT-----------A-A-A--A-CCATTCT
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              1792 32 +     17877 CTAATA-AAA----GTGAAGTTTGGT-----------A-A-A--A-TCATTCT
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            159359 32 -    216457 CTAATA-AAA----GTGAAGTTTGGT-----------A-A-A--A-TCATTCT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          63830 32 +     76511 CTAATA-AAA----GTGAAGTTTGGT-----------A-A-A--A-TCATTCT
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chiropotes_israelita.k141_747660                          100436 32 +    146308 CTAGTA-AAA----GTGAAGTTTGGT-----------A-A-A--A-TCATTCT
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          32243 32 -     50570 CTAGTA-AAA----GTGAAGTTTGGT-----------A-A-A--A-TCATTCT
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18432556 32 -  18827391 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       19053 32 -     50209 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135426057 32 + 135778131 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1914558 32 +   2368649 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952806 32 + 200372422 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTGT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              41079 32 +     84244 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17550949 25 -  53390261 ATGGTA-GCAAAGTATgtatctttga---------------------------
i Condylura_cristata.JH655891.1                          C 0 I 13
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           2452 29 +     23735 cttgta-gca----atgtatattggt-----------a-a-a--a-ccat---
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 I 6
s Cricetomys_gambianus.CriGam_scaffold_18520                 52786 28 +     63868 TTAGTA-ACA----ATTAC-ATTGGT-----------A-A-A--G-TGAT---
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_2013195               50 28 +       399 TTGGTA-ATT----G--AATTATACT-----------ATA-A--A-TCAT---
i Crocidura_indochinensis.CroInd_scaffold_2013195        n 0 n 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             30586 16 -     87169 ------------------ATCTTGGG-----------A-A-A--A-CCAT---
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 5 I 6
s Dasypus_novemcinctus.JH564415.1                            69461 29 +   2246927 gtgata-gca----gtgaatcttgat-----------a-a-a--a-cctt---
i Dasypus_novemcinctus.JH564415.1                        C 0 I 5
s Delphinapterus_leucas.KZ290073.1                        16813891 29 +  35494412 ctggta-gca----gtgtatcttggt-----------a-a-a--a-ccat---
i Delphinapterus_leucas.KZ290073.1                       C 0 I 6
s Desmodus_rotundus.KZ672289.1                             8632031 28 +  20541912 ctggta-gc-----ctgtatcttggt-----------a-a-a--a-tcac---
i Desmodus_rotundus.KZ672289.1                           C 0 I 6
s Eidolon_helvum.AWHC01278734.1                                702 29 +      2334 TCAGTA-TCA----GTATATCTTAGT-----------A-A-A--A-CCAT---
i Eidolon_helvum.AWHC01278734.1                          I 39 I 6
s Elaphurus_davidianus.JRFZ01104969.1                       314013 29 +    607251 ctggta-gca----gtgtatcttggt-----------g-a-a--a-ccat---
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 6
s Ellobius_lutescens.LOEQ01008920.1                          23313 20 -    110024 TTGGTA-ACA----ATGGCTATTGG----------------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 9
s Ellobius_talpinus.LOJH01081419.1                            3234 20 +      8657 TTGGTA-ACA----ATGGCTATTGG----------------------------
i Ellobius_talpinus.LOJH01081419.1                       C 0 I 9
s Eptesicus_fuscus.JH977646.1                              2149165 29 -  14770903 ctggtg-gca----atatatcttggt-----------a-a-a--a-tcat---
i Eptesicus_fuscus.JH977646.1                            C 0 I 6
s Erythrocebus_patas.Contig38                             21209228 32 -  21539334 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           13320 29 +    133382 ctggta-gca----gtgtatcttggt-----------a-a-a--a-ccat---
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 6
s Eubalaena_japonica.EubJap_flattened_line_31514             27266 29 -     44125 ctggta-gca----gtgtatcttggt-----------a-a-a--a-ccat---
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 I 6
s Felis_catus.CM001381.2                                  20239151 16 + 206538554 ------------------atattggg-----------a-a-a--a-ccat---
i Felis_catus.CM001381.2                                 I 5 I 6
s Felis_catus_fca126.CM031415.1                           20198026 16 + 205367284 ------------------atattggg-----------a-a-a--a-ccat---
i Felis_catus_fca126.CM031415.1                          I 5 I 6
s Felis_nigripes.FelNig_flattened_line_20823                 11686 16 -     36744 ------------------ATATTGGG-----------A-A-A--A-CCAT---
i Felis_nigripes.FelNig_flattened_line_20823             I 5 I 6
s Galeopterus_variegatus.GalVar_scaffold_108840               4722 29 -      9135 CTCGTA-ACA----GTAAATCTTGGT-----------A-A-A--A-CCAT---
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 I 5
s Giraffa_tippelskirchi.LVKQ01S007888.1                     611248 29 -    660261 ctggta-gca----gtgtatcttggt-----------a-g-a--a-ccat---
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 I 6
s Glis_glis.GliGli_scaffold_19807                            33414 29 +     49224 caagta-aca----gtgaatcttggt-----------a-a-a--a-tcat---
i Glis_glis.GliGli_scaffold_19807                        C 0 I 5
s Gorilla_beringei.k141_3596273                              20063 32 -     32273 CTAGTA-AAA----GTGAATTTTAGT-----------A-A-A--A-TCATTCT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186342199 32 + 186649187 CTAGTA-AAA----GTGAATTTTAGT-----------A-A-A--A-TCATTCT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   35419 29 +     78134 CAAGTA-ACA----GTGAGTCTTGGT-----------A-A-A--A-TCAT---
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 5
s Helogale_parvula.HelPar_flattened_line_2585               244394 16 +    327341 ------------------ATCCTGGG-----------A-A-A--A-CCAT---
i Helogale_parvula.HelPar_flattened_line_2585            I 5 I 6
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 21847 29 +     36099 ctgata-gca----gtgtatcttgcg-----------a-a-a--a-ccat---
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 I 6
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112751 25 +    128679 CTGGTA-GCA----GTATATCTTGGT-----------A-A-A--A--------
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 I 9
s Hipposideros_armiger.JXIK01000431.1                       112494 29 +   1711038 ctggga-gca----gtggatcttggt-----------a-a-a--a-ccat---
i Hipposideros_armiger.JXIK01000431.1                    I 7 I 6
s Hipposideros_galeritus.HipGal_scaffold_101188               1066 29 +      9903 ctggga-gca----gtggatcttggt-----------a-a-a--a-ccat---
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 I 6
s Hoolock_leuconedys.ctg274                                    438859 32 +    630532 CTAGTA-AAA----GTGAATTTTAGT-----------A-A-A--A-TCATTCT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  47141 17 +     55795 ------------------ATCTTAGG-----------AAA-A--A-CCAT---
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 5 I 6
s Ictidomys_tridecemlineatus.JH393364.1                    7523055 10 -   7955117 TCAGTA-ACA----G--------------------------------------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                1097 29 -     31341 ctggta-gca----gtgtatcttggt-----------a-a-a--a-ccat---
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 I 6
s Kogia_breviceps.KogBre_flattened_line_81059                  843 29 -     18011 ctggta-gta----gtgtatcttggt-----------a-a-a--a-ccat---
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 I 6
s Lagothrix_lagothricha.k141_1005387                         16495 32 -     38430 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    18871 29 -     42476 CCAGTG-GCA----ATGCATCTTGGG-----------A-A-A--A-CCAT---
i Lasiurus_borealis.LasBor_scaffold_32767                I 30 I 6
s Lipotes_vexillifer.KE559953.1                             270152 29 -    662738 ctggta-gca----gtgtatcttggt-----------a-a-a--a-ccat---
i Lipotes_vexillifer.KE559953.1                          C 0 I 6
s Lophocebus_aterrimus.ctg367                              1441184 32 +   1826925 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                              10996 32 +     40492 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59680250 32 +  60120075 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16767 32 -     26193 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            84543 32 -    114318 CTAGTA-AGA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 10234 32 -     23192 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19698 32 -     29190 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  28276 32 +     37952 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186843353 32 + 187317192 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461931 32 -  25927173 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  84132 32 +     89720 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                11125 32 +     20474 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10922 32 -     14993 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333784 32 -    668171 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 9234 32 -     24072 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29865 32 -     45290 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92822 29 +     94391 ctagta-tca----gtgtatcttagt-----------a-a-a--a-ccac---
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 6
s Mandrillus_leucophaeus.scaffold280                      23941453 32 -  24302211 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355568 32 +    752769 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33105346 29 -  40650429 ctagta-aca----gtgaaccttggt-----------a-a-a--a-taat---
i Marmota_marmota.CZRN01000018.1                         C 0 I 5
s Megaderma_lyra.MegLyr_scaffold_4542                        15375 12 -    207569 ----------------------TTGT-----------A-A-A--A-CCAT---
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 6
s Meriones_unguiculatus.MerUng_scaffold_7390                 35570 29 +    140813 TTAATA-AAA----ATGAATATTGGC-----------A-A-A--A-TAAT---
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    5535 29 +     10310 ctggta-gca----gtgtatcttggt-----------a-a-a--a-ccat---
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 I 6
s Micronycteris_hirsuta.MicHir_scaffold_52381                17777 29 -     19307 ctggga-gcc----ctgtaccttggt-----------a-a-a--a-tcac---
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 6
s Miniopterus_natalensis.LDJU01000034.1                    1852371 29 +   8254450 ctggta-gca----atgtatctgggt-----------a-a-a--a-ccat---
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 6
s Miniopterus_schreibersii.MinSch_scaffold_18080             36055 29 +     64694 ctggta-gca----atgtatctgggt-----------a-a-a--a-ccat---
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 6
s Miopithecus_ogouensis.k141_534055                          13134 32 -     28506 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    29276 29 -    437263 ctggta-gca----gtgtatcttggt-----------a-a-a--a-ccat---
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 6
s Mormoops_blainvillei.MorMeg_scaffold_1417                 143366 29 -    366855 CTGCTA-GCA----CTGTATCTTGGT-----------A-G-A--A-TCAC---
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 6
s Moschus_moschiferus.MosMos_scaffold_13123                   3294 29 +     82753 CTGGGA-GCA----GTGTATCTTGGT-----------A-A-A--A-CCAT---
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 6
s Murina_feae.MurFea_scaffold_85699                           9120 29 +     14753 ctggta-gca----atgtatcttggt-----------a-a-a--a-ccat---
i Murina_feae.MurFea_scaffold_85699                      C 0 I 6
s Mus_caroli.LT608237.1                                   84363930 25 - 120012414 ----AA-ACA----GTGATTATTAGT-----------A-A-A--A-TGAT---
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87653430 25 - 129401213 ----AA-AAA----ATGATTATTAGT-----------A-A-A--A-TGAT---
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31358155 25 -  89631738 ----AA-ACA----GCAAATATTAGT-----------A-A-A--A-TGAT---
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90755919 26 - 130317789 ----aaaaaa----atgattattagT-----------A-A-A--A-TGAT---
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              6901 17 +     14296 CAAGTA-ACA----GTGAATTT-------------------------------
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 8
s Myotis_brandtii.KE162005.1                                282869 29 -  10118263 ctggta-gca----atgtatcttggt-----------a-a-a--t-ccat---
i Myotis_brandtii.KE162005.1                             C 0 I 6
s Myotis_davidii.KB100139.1                                1590187 29 -   6019432 ctggta-gca----atgtatcttggt-----------a-a-a--a-ccat---
i Myotis_davidii.KB100139.1                              C 0 I 6
s Myotis_lucifugus.GL429869.1                              3906299 29 -   4330536 ctggta-gca----atgtatcttggt-----------a-a-a--a-ccat---
i Myotis_lucifugus.GL429869.1                            C 0 I 6
s Myotis_myotis.MyoMyo_scaffold_44643                          601 29 +     25416 ctggta-gca----atgtttcttggt-----------a-a-a--a-ccat---
i Myotis_myotis.MyoMyo_scaffold_44643                    C 0 I 6
s Nannospalax_galili.KL204518.1                            3931280 29 -   9623020 CTGATA-ACA----ATGAATTTTAGT-----------A-A-A--A-TCAT---
i Nannospalax_galili.KL204518.1                          I 58 C 0
s Nasalis_larvatus.k141_413338                               19184 32 +     21681 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5868239 29 +   7148211 ctggta-gca----gtgtatcttggt-----------a-a-a--a-ccat---
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 6
s Noctilio_leporinus.NocLep_scaffold_251                    759554 29 +    783361 CCAGTA-GCA----ATGTATCGTGGT-----------C-A-A--A-TCGC---
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 6
s Ochotona_princeps.JH802162.1                             1367033 40 +   3988456 ATGATA-ATA----gtaaatcctgattttttttttaaa-a-a--g-ccat---
i Ochotona_princeps.JH802162.1                           C 0 I 5
s Odocoileus_virginianus.KZ100018.1                         146815 29 +    630418 ctggca-gca----gtgtatcttggt-----------a-a-a--a-ccat---
i Odocoileus_virginianus.KZ100018.1                      C 0 I 6
s Okapia_johnstoni.LVCL01S0005463.1                          79134 26 -    150152 gtggta-gca----gtgtatcttggt-----------a-a-a--a-c------
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 1803
s Ondatra_zibethicus.OndZib_scaffold_7387                      408 20 +    140218 TTGGTA-AAA----ATGGCTATTGG----------------------------
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 9
s Onychomys_torridus.OnyTor_scaffold_2986                    83340 15 +    102263 TTAGTA-ACA----ATGACT---------------------------------
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 7
s Orcinus_orca.KB316932.1                                  2784132 29 -  10937097 ctggta-gca----gtgtatcttggt-----------a-a-a--a-ccat---
i Orcinus_orca.KB316932.1                                C 0 I 6
s Ovis_aries.CM001607.2                                   17589598 29 +  44047080 CTGATA-GCA----GTGTATCTTGCT-----------A-A-A--A-CCAT---
i Ovis_aries.CM001607.2                                  C 0 I 6
s Ovis_canadensis.OviCan_scaffold_2572                      177800 29 -    191736 CTGATA-GCA----GTGTATCTTGCT-----------A-A-A--A-CCAT---
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 I 6
s Pan_paniscus.KQ411613.1                                    48164 32 +     80009 CTAGTA-AAA----GTGAATTTTAGT-----------A-A-A--A-TCGTTCT
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189147019 33 + 189151597 CTAGTA-AAA----GTGAATTTTAGT-----------A-A-A--AATCATTCT
i Pan_troglodytes.CM009242.2                             C 0 I 58
s Panthera_onca.PanOnc_flattened_line_3271                  153222 16 +    230217 ------------------ATATTGGG-----------A-A-A--A-CCAT---
i Panthera_onca.PanOnc_flattened_line_3271               I 5 I 6
s Panthera_pardus.KV860321.1                                266533 16 +  18783137 ------------------atattggg-----------a-a-a--a-ccat---
i Panthera_pardus.KV860321.1                             I 5 I 6
s Panthera_tigris.KE722367.1                               4723358 16 -   8748460 ------------------atattggg-----------a-a-a--a-ccat---
i Panthera_tigris.KE722367.1                             I 5 I 6
s Pantholops_hodgsonii.KE114653.1                          1268533 29 -   2937107 ctgata-gca----gtgtatcttgct-----------a-a-a--a-ccat---
i Pantholops_hodgsonii.KE114653.1                        C 0 I 6
s Papio_anubis.CM001495.2                                183447257 32 + 183742232 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10907 32 +     20448 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567715 32 +  20919399 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   9647 32 +     41871 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12940 32 +     27711 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3939 32 -     11374 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14663 16 -     78924 ------------------ATCTTGGG-----------A-A-A--A-CCAT---
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 5 I 6
s Peromyscus_maniculatus.KI615324.1                       18214080 20 -  18517816 TTAGCA-ACA----ATGACTATTGT----------------------------
i Peromyscus_maniculatus.KI615324.1                      C 0 I 8
s Phocoena_phocoena.PhoPho_flattened_line_24159              11201 29 +     63832 ctggta-gca----gtgtatcttggt-----------a-a-a--a-ccat---
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 6
s Piliocolobus_badius.k141_1142974                            2262 32 +     68526 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        42407 32 +     89929 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43821 32 +     51399 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14300058 32 -  14605196 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3938 29 +     22620 ttggtc-gca----atgtatcttggt-----------a-a-a--a-ccat---
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 6
s Pithecia_albicans.k141_1476471                              5707 32 +     26961 CTAGTA-AAA----GTGATGTTTGGT-----------T-A-A--A-TCATTCT
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          1835 32 +     23417 CTAGTA-AAA----GTGAAGTTTGGT-----------T-A-A--A-TCATTCT
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                5699 32 +     29694 CTAGTA-AAA----GTGATGTTTGGT-----------T-A-A--A-TCATTCT
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          30725 32 +     52772 CTAGTA-AAA----GTGATGTTTGGT-----------T-A-A--A-TCATTCT
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           5721 32 +     26198 CTAGTA-AAA----GTGATGTTTGGT-----------T-A-A--A-TCATTCT
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3942252 32 +   4542175 CTAGTA-AAA----GTGAAGTTTGGT-----------T-A-A--A-TCATTCT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            5685 32 -     23490 CTAGTA-AAA----GTGATGTTTGGT-----------T-A-A--A-TCATTCT
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610            507 29 +      7680 ctggta-gca----gtgtatcttggc-----------a-a-a--a-ccat---
i Platanista_gangetica.PlaMin_flattened_line_173610      C 0 I 6
s Plecturocebus_bernhardi.k141_2549090                        9938 32 -     39866 CTAATA-AAA----GTGAAGTTTGGT-----------A-A-A--A-TCATTCT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        19104 32 +     34906 CTAATA-AAA----GTGAAGTTTGGT-----------A-A-A--A-TCATTCT
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       23366 32 +     87950 CTAATA-AAA----GTGAAGTTTGGT-----------A-A-A--A-TCATTCT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     24195 32 +     88961 CTAATA-AAA----GTGAAGTTTGGT-----------A-A-A--A-TCATTCT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9863 32 +     39403 CTAATA-AAA----GTGAAGTTTGGT-----------A-A-A--A-TCATTCT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          23647 32 -     87928 CTAATA-AAA----GTGAAGTTTGGT-----------A-A-A--A-TCATTCT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         30606 32 +     60166 CTAATA-AAA----GTGAAGTTTGGT-----------A-A-A--A-TCATTCT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      30803 32 +     67232 CTAATA-AAA----GTGAAGTTTGGT-----------A-A-A--A-TCATTCT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          26276 32 +     90634 CTAATA-AAA----GTGAAGTTTGGT-----------A-A-A--A-TCATTCT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          23648 32 -     89403 CTAATA-AAA----GTGAAGTTTGGT-----------A-A-A--A-TCATTCT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189135173 32 + 189387572 CTAGTA-AAA----GTGAATTTTAGT-----------A-A-A--A-TCATTCT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9574783 32 +   9816681 CTAGTA-AAA----GTGAATTTTAGT-----------A-A-A--A-TCATTCT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               77361 32 -     81375 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              9178 32 +     19060 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            13203 29 -     21651 TTAGTA-AAA----ATGAATATTGGC-----------A-A-A--A-TAAT---
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            16849 29 -     21811 CCGCTA-GCA----CTGTATCTTGGC-----------A-A-A--A-TCAC---
i Pteronotus_parnellii.KE909381.1                        C 0 I 6
s Pteropus_alecto.KB030862.1                              22978908 29 +  28871421 ctagta-tca----gtatatcttagt-----------a-a-a--a-ctat---
i Pteropus_alecto.KB030862.1                             C 0 I 6
s Pteropus_vampyrus.KN525825.1                             1361911 11 +   4952924 -----------------------AGT-----------A-A-A--A-CCAT---
i Pteropus_vampyrus.KN525825.1                           I 2 I 6
s Puma_concolor.QAVW01001104.1                            20276421 16 -  38429054 ------------------atattggg-----------a-a-a--a-ccat---
i Puma_concolor.QAVW01001104.1                           I 5 I 6
s Pygathrix_cinerea.k141_1153803                             19171 32 -     91421 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7613294 32 +   7812017 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             19201 32 -     72585 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  8650 29 +     55207 ctggca-gca----gtgtatcttggt-----------a-a-a--a-tcat---
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 6
s Rattus_norvegicus.chr16                                 53573523 19 +  90668790 ---------------TTGATATTAGT-----------A-A-A--A-TGAT---
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        368956 29 -   3329780 ctggta-gca----gtgtatcttggt-----------a-a-a--a-ccat---
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 6
s Rhinopithecus_bieti.k119_217274                            10868 32 -     11128 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91240234 32 - 195417433 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675883 32 +   7961872 CTAGTA-AAT----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                89982 29 -     96226 CTTGTA-TCA----GTTTATCTCAGT-----------A-A-A--A-CGAT---
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 6
s Saiga_tatarica.SaiTat_scaffold_133311                       1132 29 +      9503 ctggta-gca----gtgtatcttgct-----------a-a-a--a-gcat---
i Saiga_tatarica.SaiTat_scaffold_133311                  C 0 I 6
s Scalopus_aquaticus.ScaAqu_scaffold_662                    155263 33 -    313613 CTGGTA-GCAAGGTATGTATCTTCAT-----------A-A-A--A-CCAT---
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 6
s Semnopithecus_entellus.k141_1672505                         4042 32 -     12572 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30894 32 +     39453 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           11398 32 +     27826 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10943 32 -     19483 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      4241 32 -     12762 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           4086 32 +     13763 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     3110 20 -     30804 TTAGTA-ACA----AGGATTACTGG----------------------------
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 I 9
s Sorex_araneus.JH798187.1                                13653089 30 -  18376816 CTGGTA-GCT----GTGTATCTTAAT-----------ATA-A--A-CTAT---
i Sorex_araneus.JH798187.1                               C 0 I 6
s Spermophilus_dauricus.KZ294078.1                         1956212 10 -   3870691 CCAGTA-ACA----G--------------------------------------
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              20654 16 -    196729 ------------------ATCTTGGG-----------A-A-A--A-CCAT---
i Suricata_suricatta.SurSur_flattened_line_6629          I 5 I 6
s Sus_scrofa.CM000828.4                                    6813779 29 +  69701581 ctggta-gca----atgtgtcttggt-----------a-a-a--c-ccat---
i Sus_scrofa.CM000828.4                                  C 0 I 6
s Tadarida_brasiliensis.TadBra_scaffold_25820                13320 29 +     41958 ctggta-gcg----atgtatcttggt-----------a-a-a--a-ccat---
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 6
s Tarsius_lariang.k141_2201908                               27849 32 +     70052 CTGGTA-ACA----GTGAATCTTGGC-----------A-A-A--G-CCATTGT
i Tarsius_lariang.k141_2201908                           C 0 I 1
s Tarsius_wallacei.k141_254427                                2646 32 -     16117 CTAGTA-ACA----GTGAATCTTGGC-----------A-A-A--G-CCATTGT
i Tarsius_wallacei.k141_254427                           C 0 I 1
s Theropithecus_gelada.CM009954.1                        186432565 32 + 186847797 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_85600                    4514 29 +     18632 GTGGTA-TCA----GTGAATCTTGGT-----------A-A-A--A-CCTT---
i Tolypeutes_matacus.TolMat_scaffold_85600               C 0 I 5
s Tonatia_saurophila.TonSau_scaffold_294                     83122 29 +    610378 ctgaaa-gcc----ctgtatcttggt-----------a-a-a--a-tcac---
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 6
s Trachypithecus_auratus.k141_722599                         14980 32 -     20410 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      4103 32 -     12674 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       15088 32 +     19930 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      11490 32 -     19997 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            51631 32 -     60166 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        19094 32 -     27529 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                        726 32 +      9229 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          12628 32 -     21137 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                     728 32 +      9131 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                          692 32 -      3730 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28960 32 +     32220 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5943057 32 +   6242583 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       12309 32 +     20839 CTAGTA-AAA----GTGAATTTTGGT-----------A-A-A--A-TCATTCT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    2544 29 +     27266 CTGGTA-GCA----ATGCATCTTGCT-----------A-A-A--A-ACAT---
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 I 51
s Tupaia_chinensis.KB320699.1                              2159174 30 +   4065304 CTAGTA-ACA----GCTGATCTTGGT-----------A-AAA--A-CCAT---
i Tupaia_chinensis.KB320699.1                            C 0 I 5
s Tupaia_tana.TupTan_flattened_line_306982                    1589 29 -      4186 CTAGTA-ACA----GCTAATCTTTGT-----------A-A-A--A-CTAT---
i Tupaia_tana.TupTan_flattened_line_306982               C 0 I 5
s Tursiops_truncatus.MRVK01000835.1                       15740385 29 +  33153633 ctggta-gca----gtgtatcttggt-----------a-a-a--a-ccat---
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 6
s Uropsilus_gracilis.UroGra_scaffold_12083                   55341 31 -     77625 CTGGTA-GCAAAGTGT--GTCTTGGC-----------A-A-A--A-TCAT---
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 6
s Vicugna_pacos.KN270157.1                                 5374055 17 -   5488506 -----------------TATCttgat-----------a-a-a--a-cctt---
i Vicugna_pacos.KN270157.1                               I 5 I 6
s Xerus_inauris.XerIna_scaffold_2302                          3228 29 +    224448 ctagta-aca----gtgaactttggt-----------a-a-a--a-taat---
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 5
s Zapus_hudsonius.ZapHud_scaffold_11398                      16763 30 +     63895 CTAATA-CCA----GTGGATGTTCAT-----------A-AAA--A-TCAT---
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 7
s Ziphius_cavirostris.ZipCav_flattened_line_761354             690 29 -      1267 CTGGTA-GCA----GTGTATCTTGGT-----------A-A-A--A-CCAT---
i Ziphius_cavirostris.ZipCav_flattened_line_761354       C 0 I 6
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Alouatta_seniculus.k141_117119                             17657 14 +     50774 I
e Alouatta_puruensis.k141_362188                              3206 14 +      5663 I
e Alouatta_nigerrima.k141_1929159                             2484 14 +     30492 I
e Alouatta_macconnelli.k141_918386                            3526 14 -      9457 I
e Alouatta_juara.k141_1302312                                 2438 14 +     27940 I
e Alouatta_discolor.k141_566626                              13966 14 +     28687 I
e Alouatta_caraya.k141_1701091                                3513 14 -     36483 I
e Alouatta_belzebul.k141_3560514                             10406 14 +     51355 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 12841 537 -     43706 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              107540  0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    389823 643 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      121344 643 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Petromus_typicus.PetTyp_scaffold_221660                      871  0 -      2102 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Otocyon_megalotis.JAEUCK010005147.1                       464401 867 -    559221 I
e Oryctolagus_cuniculus.CM000791.1                        67149665 1414 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Octodon_degus.JH651603.1                                  749928  0 +  11899542 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9151314 530 -   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     73439  0 -     80779 C
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184611 154 -  29670104 I
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Manis_pentadactyla.KN006162.1                              53022 987 -    317179 I
e Manis_javanica.JSZB01003497.1                              20877 990 +    737560 I
e Lycaon_pictus.CM007581.1                                17957377 535 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     8427 743 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Jaculus_jaculus.JH725527.1                               8278673 121 -   9596543 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hystrix_cristata.HysCri_scaffold_5660                      85084  0 +    135385 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23782  0 -    143317 C
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20664158  0 +  22651954 C
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Fukomys_damarensis.KN121974.1                             852512  0 +   3816255 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               35993 651 +    498745 I
e Equus_caballus.CM000403.2                               18533964 651 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1286155 651 +   4378816 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 35526  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    38384  0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    8624 649 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  675871 642 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasyprocta_punctata.DasPun_flattened_line_15900             2011  0 -     75252 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  38182  0 +     51376 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1254902  0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5047 647 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                       102948  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18364066  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18351806  0 -  23392119 C
e Capromys_pilorides.CapPil_scaffold_65020                    3253  0 -     12242 C
e Canis_lupus_orion.HG994398.1                            18502439 535 +  63665305 I
e Canis_lupus_familiaris.chr16                            17961137 535 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9036666 537 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     1966 535 -     43241 I
e CanFam4.chr16                                           17801223 537 -  60362399 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Allactaga_bullata.AllBul_scaffold_9566                     75924 121 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T

a score=0.000000
s hg38.chrUn_KI270753v1                                      10850 58 +     62944 T-GGTAAGAC----------------------------TCTGTATAACTTTGGACAT-AAA-TTACTATTCCTGCCTGGGCA--------------TGGtggc
s Allenopithecus_nigroviridis.k141_3361533                   18718 59 -     52922 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         18655 59 -     28001 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          9150 59 -     18505 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                          10003 59 -     12518 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_palliata.k141_2135620                              6522 59 +     47717 T-AGTAAGAC----------------------------CCTGTATAACTTAGGACTTAAAA-TTACTATTTCTggctgggcg--------------tggtggc
i Alouatta_palliata.k141_2135620                         C 0 I 97
s Ateles_geoffroyi_b.tarseq_1536                             21210723 59 -  21539123 T-GGTAAGAC----------------------------TCTGTATAACTTAGGACTTAAAA-TTACTATTTCTggctgggcg--------------cggtggc
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               45519 59 -     48001 T-GGTAAGAC----------------------------TCTGTATAACTTAGGACTTAAAA-TTACTATTTCTggctgggcg--------------ccgtggc
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 28323 59 -     30947 T-GGTAAGAC----------------------------TCTGTATAACTTAGGACTTAAAA-TTACTATTTCTggctgggcg--------------cggtggc
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               10095 59 -     89868 T-GGTAAGAC----------------------------TCTGTATAACTTAGGACTTAAAA-TTACTATTTCTggctgggcg--------------cggtggc
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              14479 59 -     40414 T-GGTAAGAC----------------------------TCTGTATAACTTAGGACTTAAAA-TTACTATTTCTggctgggcg--------------cggtggc
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                22368 59 +     72325 T-GGTAAGAC----------------------------TCTGTATAACTTAGGACTTAAAA-TTACTATTTCTggctgggcg--------------cggcggc
i Ateles_paniscus.k141_457735                            C 0 C 0
s Cacajao_ayresi.k141_552049                                103339 59 -    122966 T-CGTAAGAC----------------------------TCTGTATAACTTAGGACTTAAAA-TTACTATTTCTggctgggct--------------cagtggc
i Cacajao_ayresi.k141_552049                             C 0 I 98
s Cacajao_calvus.k141_5142                                   62842 59 +     81800 T-CGTAAGAC----------------------------TCTGTATAACTTAGGACTTAAAA-TTACTATTTCTggctgggcg--------------tggtggc
i Cacajao_calvus.k141_5142                               C 0 I 98
s Cacajao_hosomi.k141_81245                                  32024 59 -     95584 T-CGTAAGAC----------------------------TCTGTATAACTTAGGACTTAAAA-TTACTATTTCTggctgggct--------------cagtggc
i Cacajao_hosomi.k141_81245                              C 0 I 98
s Cacajao_melanocephalus.k141_619699                         56125 59 -    119600 T-CGTAAGAC----------------------------TCTGTATAACTTAGGACTTAAAA-TTACTATTTCTggctgggcg--------------tggtggc
i Cacajao_melanocephalus.k141_619699                     C 0 I 98
s Carlito_syrichta.NW_007259797.1                           157385 85 -    496798 TTGATAAACCTCCTTAATATATTTTGAgactctgaaaatgtgtataactTTGAACTTAG----CATTTTTCCTtaacaggct--------------cagtggc
i Carlito_syrichta.NW_007259797.1                        I 1 I 97
s Cephalopachus_bancanus.k141_1423433                         6883 84 +     31688 TTGATAAACCTCCACAATATATTTTGA-GACTCTGAAATCTGTATAACTTTGAACTTAG----CATTTTTCCTTAAcaggct--------------cagtggc
i Cephalopachus_bancanus.k141_1423433                    I 1 I 97
s Cercocebus_atys.KQ010504.1                               4479673 57 +   4669795 T-GGTAAGA------------------------------CTGTATAACTTTGGatgtaaaa-ttattattcctgcctgggca--------------tggtggc
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        4170 59 +     17872 T-CGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4765 54 -     14043 T-GGTAAGA------------------------------CTGTATAACTTTGGATGTAAAA----TTATTCCTGCCTGGGCA--------------TGGTGGC
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12860 57 +     27781 T-GGTAAGA------------------------------CTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        13015 59 -     20310 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          15991 59 +     29689 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10751 59 -     20078 T-GGTAAGAC----------------------------TCTGTATAACTTTGAATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          18662 59 -     27936 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            7537 59 -     17152 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38827261 59 +  39242232 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226769 59 -  21565898 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43888 59 -     53127 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        4138 59 +     13442 T-GGTAAGAC----------------------------TCTATATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       18684 59 -     27947 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1709 59 +     10558 T-GGTAAGAC----------------------------TCTGTATAACTTTGAATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4718 59 +     14005 T-GGTAAGAC----------------------------TCTGTATAACTTTGAATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               1948 59 -     17098 T-GGTAAGAC----------------------------TCTGTATAACTTAGGACTTAAAA-TTACTATTTCTggctgggtg--------------cagtggc
i Cheracebus_lucifer.k141_49986                          C 0 I 96
s Cheracebus_lugens.k141_1393925                              1824 59 +     17877 T-GGTAAGAC----------------------------TCTGTATAACTTAGGACTTAAAA-TTACTATTTCTggctgggtg--------------cagtggc
i Cheracebus_lugens.k141_1393925                         C 0 I 96
s Cheracebus_regulus.k141_471822                            159391 57 -    216457 T-GGTAAGAC----------------------------TC--TATAACTTAGGACTTAAAA-TTACTATTTCTggctgggtg--------------cagtggc
i Cheracebus_regulus.k141_471822                         C 0 I 96
s Cheracebus_torquatus.k141_1170026                          63862 57 +     76511 T-GGTAAGAC----------------------------TC--TATAACTTAGGACTTAAAA-TTACTATTTCTggctgggtg--------------cagtggc
i Cheracebus_torquatus.k141_1170026                      C 0 I 96
s Chiropotes_israelita.k141_747660                          100468 59 +    146308 T-GGTAAGAC----------------------------TCTGTATAACTTAGGACTTAAAA-TTACTATTTCTggctgggcg--------------cggtggc
i Chiropotes_israelita.k141_747660                       C 0 I 98
s Chiropotes_sagulatus.k141_1421488                          32275 59 -     50570 T-GGTAAGAC----------------------------TCTGTATAACTTAGGACTTAAAA-TTACTATTTCTggctgggcg--------------cggtggc
i Chiropotes_sagulatus.k141_1421488                      C 0 I 98
s Chlorocebus_aethiops.ctg25                              18432588 59 -  18827391 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       19085 59 -     50209 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135426089 59 + 135778131 T-GGTAAGAC----------------------------TCTGTATAACTTTGGatgtaaaa-ttattattcctgcctgggca--------------tggtggc
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1914590 59 +   2368649 T-GGTAAGAC----------------------------TCTGTATAACTTTAGATGTAAAA-GTATTATTcctacctgggca--------------tggtggc
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952838 59 + 200372422 T-GGTAAGAC----------------------------TCTGTATAACTTTCGATGTAAAA-GTATTATTCCTACCTGGGCA--------------TGGTGGC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              41111 59 +     84244 T-GGTAAGAC----------------------------TCTGTATAACTTTAGATGTAAAA-GTATTATTCCTACCTGGGCA--------------TGGTGGC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Erythrocebus_patas.Contig38                             21209260 59 -  21539334 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Gorilla_beringei.k141_3596273                              20095 58 -     32273 T-GGTAAGAC----------------------------TCTGTATAACTTTGGACAT-AAA-TTACTATTCCTGCCTGGGCA--------------TGGTGGC
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186342231 58 + 186649187 T-GGTAAGAC----------------------------TCTGTATAACTTTGGACAT-AAA-TTACTATTcctgcctgggca--------------tggtggc
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hoolock_leuconedys.ctg274                                    438891 59 +    630532 T-GGTAAGAC----------------------------TCTGTATAACTTTGGACAT-AAAATTATTATTCCTGCCTGGGCC--------------TGGTGGC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         16527 59 -     38430 T-GGTAAGAC----------------------------TTTGTATAACTTAGGACTTAAAA-TTACTATTTCTggctgggcg--------------cggtggc
i Lagothrix_lagothricha.k141_1005387                     C 0 I 98
s Lophocebus_aterrimus.ctg367                              1441216 59 +   1826925 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                              11028 59 +     40492 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59680282 59 +  60120075 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16799 59 -     26193 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------CGGTGGC
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            84575 59 -    114318 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 10266 59 -     23192 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------CGGTGGC
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19730 59 -     29190 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  28308 59 +     37952 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186843385 59 + 187317192 T-GGTAAGAC----------------------------TCTGTATAACTTTGGatgtaaaa-ttattattcctgcctgggca--------------cggtggc
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25461963 59 -  25927173 T-GGTAAGAC----------------------------TCTGTATAACTTTGGatgtaaaa-ttattattcctgcctgggca--------------tggtggc
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  84164 59 +     89720 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                11157 59 +     20474 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  10954 59 -     14993 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333816 59 -    668171 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 9266 59 -     24072 T-GGTAAGAC----------------------------TCTGTATAACTTTGGACGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29897 59 -     45290 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23941485 59 -  24302211 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355600 59 +    752769 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Miopithecus_ogouensis.k141_534055                          13166 59 -     28506 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Nasalis_larvatus.k141_413338                               19216 59 +     21681 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Pan_paniscus.KQ411613.1                                    48196 58 +     80009 T-GGTAAGAC----------------------------TCTGTATAACTTTGGACAT-AAA-TTACTATTcctgcctgggca--------------tggtggc
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03001836.1                             34106 58 +     51860 T-GGTAAGAC----------------------------TCTGTATAACTTTGGACAT-AAA-TTACTATTcctgcctgggca--------------tggtggc
i Pan_troglodytes.NBAG03001836.1                         I 624 I 122
s Papio_anubis.CM001495.2                                183447289 59 + 183742232 T-GGTAAGAC----------------------------TCTGTATAACTTTGGatgtaaaa-ttattattcctgcctgggca--------------tggtggc
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10939 59 +     20448 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567747 59 +  20919399 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   9679 59 +     41871 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    12972 59 +     27711 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  3971 59 -     11374 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Papio_ursinus.k141_5274964                             C 0 C 0
s Piliocolobus_badius.k141_1142974                            2294 59 +     68526 T-GGTAAGAC----------------------------TCTGTATAACTTTAGATGTAAAA-TTATTATTCCTACCTGGGCA--------------TGGTGGC
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        42439 59 +     89929 T-GGTAAGAC----------------------------TCTGTATAACTTTAGATGTAAAA-TTATTATTCCTACCTGGGCA--------------TGGTGGC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43853 59 +     51399 T-GGTAAGAC----------------------------TCTGTATAACTTTAGATGTAAAA-TTATTATTCCTACCTGGGCA--------------TGGTGGC
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14300090 59 -  14605196 T-GGTAAGAC----------------------------TCTGTATAACTTTAGatgtaaaa-ttattattcctacctgggca--------------tggtggc
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1476471                              5739 59 +     26961 T-GGTAAGAC----------------------------TCTGTATAACTTAGGACTTAAAA-TTACTATTTCTggctggatg--------------cagtggc
i Pithecia_albicans.k141_1476471                         C 0 I 98
s Pithecia_chrysocephala.k141_839575                          1867 59 +     23417 T-GGTAAGAC----------------------------TCTGTATAACTTAGGACTTAAAA-TTACTATTTCTggctggatg--------------cagtggc
i Pithecia_chrysocephala.k141_839575                     C 0 I 98
s Pithecia_hirsuta.k141_305604                                5731 59 +     29694 T-GGTAAGAC----------------------------TCTGTATAACTTAGGACTTAAAA-TTACTATTTTTggctggatg--------------cagtggc
i Pithecia_hirsuta.k141_305604                           C 0 I 98
s Pithecia_mittermeieri.k141_446740                          30757 59 +     52772 T-GGTAAGAC----------------------------TCTGTATAACTTAGGACTTAAAA-TTACTATTTTTggctggatg--------------cagtggc
i Pithecia_mittermeieri.k141_446740                      C 0 I 98
s Pithecia_pissinattii.k141_1824269                           5753 59 +     26198 T-GGTAAGAC----------------------------TCTGTATAACTTAGGACTTAAAA-TTACTATTTCTggctggatg--------------cagtggc
i Pithecia_pissinattii.k141_1824269                      C 0 I 98
s Pithecia_pithecia.tarseq_165                             3942284 59 +   4542175 T-GGTAAGAC----------------------------TCTGTATAACTTAGGACTTAAAA-TTACTATTTCTggctggatg--------------cagtggc
i Pithecia_pithecia.tarseq_165                           C 0 I 98
s Pithecia_vanzolinii.k141_1697688                            5717 59 -     23490 T-GGTAAGAC----------------------------TCTGTATAACTTAGGACTTAAAA-TTACTATTTCTggctggatg--------------cagtggc
i Pithecia_vanzolinii.k141_1697688                       C 0 I 98
s Plecturocebus_bernhardi.k141_2549090                        9970 59 -     39866 T-GGTAAGAC----------------------------TCTGTATAACTTAGCACTTAAAA-TTACTATTTCTggctgggtg--------------tggtggc
i Plecturocebus_bernhardi.k141_2549090                   C 0 I 98
s Plecturocebus_brunneus.k141_1495506                        19136 59 +     34906 T-GGTAAGAC----------------------------TCTGTATAACTTAGCACTTAAAA-TTACTATTTCTggctgggtg--------------tggtggc
i Plecturocebus_brunneus.k141_1495506                    C 0 I 98
s Plecturocebus_caligatus.k141_1382851                       23398 59 +     87950 T-GGTAAGAC----------------------------TCTGTATAACTTAGCACTTAAAA-TTACTATTTCTggctgggtg--------------tggtggc
i Plecturocebus_caligatus.k141_1382851                   C 0 I 98
s Plecturocebus_cinerascens.k141_1164729                     24227 59 +     88961 T-GGTAAGAC----------------------------TCTGTATAACTTAGCACTTAAAA-TTACTATTTCTggctgggtg--------------tggtggc
i Plecturocebus_cinerascens.k141_1164729                 C 0 I 98
s Plecturocebus_cupreus.k141_2351393                          9895 59 +     39403 T-GGTAAGAC----------------------------TCTGTATAACTTAGCACTTAAAA-TTACTATTTCTggctgggtg--------------tggtggc
i Plecturocebus_cupreus.k141_2351393                     C 0 I 98
s Plecturocebus_dubius.k141_1058799                          23679 59 -     87928 T-GGTAAGAC----------------------------TCTGTATAACTTAGCACTTAAAA-TTACTATTTCTggctgggtg--------------tggtggc
i Plecturocebus_dubius.k141_1058799                      C 0 I 98
s Plecturocebus_grovesi.k141_2013005                         30638 59 +     60166 T-GGTAAGAC----------------------------TCTGTATAACTTAGCACTTAAAA-TTACTATTTCTggctgggtg--------------tggtggc
i Plecturocebus_grovesi.k141_2013005                     C 0 I 98
s Plecturocebus_hoffmannsi.k141_3303950                      30835 59 +     67232 T-GGTAAGAC----------------------------TCTGTATAACTTAGCACTTAAAA-TTACTATTTCTggctgggtg--------------tggtggc
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 I 98
s Plecturocebus_miltoni.k141_349282                          26308 59 +     90634 T-GGTAAGAC----------------------------TCTGTATAACTTAGCACTTAAAA-TTACTATTTCTggctgggtg--------------tggtggc
i Plecturocebus_miltoni.k141_349282                      C 0 I 98
s Plecturocebus_moloch.k141_1031110                          23680 59 -     89403 T-GGTAAGAC----------------------------TCTGTATAACTTAGCACTTAAAA-TTACTATTTCTggctgggtg--------------tggtggc
i Plecturocebus_moloch.k141_1031110                      C 0 I 98
s Pongo_abelii.CM009266.2                                189135205 59 + 189387572 T-GGTAGGAC----------------------------TGTGTATAACTTTGGATGTAAAA-TTACTATTcctgcctgggca--------------tggtggc
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9574815 59 +   9816681 T-GGTAGGAC----------------------------TGTGTATAACTTTGGATGTAAAA-TTACTATTCCTGCCTGGGCA--------------TGGTGGC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               77393 59 -     81375 T-GGTAAAAC----------------------------TCTGTATAACTTTGGGTGTAAAA-TTATTATTCCTG--------------CTCGGGCATGGTGGC
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              9210 73 +     19060 T-GGTAAAAC----------------------------TCTGTATAACTTTGGGTGTAAAA-TTATTATTCCTGCCTGGGCATGGTGGCTCGGGCATGGTGGC
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Pygathrix_cinerea.k141_1153803                             19203 59 -     91421 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7613326 59 +   7812017 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             19233 59 -     72585 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                            10900 59 -     11128 T-GGTAAGAC----------------------------TCTGTATAACTTCGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91240266 59 - 195417433 T-GGTAAGAC----------------------------TCTGTATAACTTCGGATGTAAAA-TTATTATTcctgcctgggca--------------tggtggc
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675915 59 +   7961872 T-GGTAAGAC----------------------------TCTGTATAACTTCGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Semnopithecus_entellus.k141_1672505                         4074 59 -     12572 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30926 59 +     39453 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           11430 59 +     27826 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            10975 59 -     19483 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      4273 59 -     12762 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           4118 59 +     13763 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Tarsius_lariang.k141_2201908                               27882 84 +     70052 T-GATAAACCTCCATAATATATTCTGAGACTCTGAAAATCTGTATAACTTTGAACTTAG----CATTTTTCCTTAGcaggct--------------cagtggt
i Tarsius_lariang.k141_2201908                           I 1 I 97
s Tarsius_wallacei.k141_254427                                2679 84 -     16117 T-GATAAACCTCCATAATATATTCTGAGACTCTGAAAATCTGTATAACTTTGAACTTAG----CATTTTTCCTTAGcaggct--------------cagtggt
i Tarsius_wallacei.k141_254427                           I 1 I 97
s Theropithecus_gelada.CM009954.1                        186432597 59 + 186847797 T-GGTAAGAC----------------------------TCTGTATAACTTTGGatgtaaaa-ttattattcctgcctgggca--------------tggtggc
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                         15012 59 -     20410 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      4135 59 -     12674 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       15120 59 +     19930 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      11522 59 -     19997 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            51663 59 -     60166 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        19126 59 -     27529 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                        758 59 +      9229 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          12660 59 -     21137 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                     760 59 +      9131 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                          724 59 -      3730 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        28992 59 +     32220 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5943089 59 +   6242583 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       12341 59 +     20839 T-GGTAAGAC----------------------------TCTGTATAACTTTGGATGTAAAA-TTATTATTCCTGCCTGGGCA--------------TGGTGGC
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Alouatta_seniculus.k141_117119                             17657 14 +     50774 I
e Alouatta_puruensis.k141_362188                              3206 14 +      5663 I
e Alouatta_nigerrima.k141_1929159                             2484 14 +     30492 I
e Alouatta_macconnelli.k141_918386                            3526 14 -      9457 I
e Alouatta_juara.k141_1302312                                 2438 14 +     27940 I
e Alouatta_discolor.k141_566626                              13966 14 +     28687 I
e Alouatta_caraya.k141_1701091                                3513 14 -     36483 I
e Alouatta_belzebul.k141_3560514                             10406 14 +     51355 I
e Mus_pahari.LT608297.1                                   31358180  0 -  89631738 C
e Mus_spretus.CM004101.1                                  90755945  0 - 130317789 C
e Mus_musculus.chr8                                       87653455  0 - 129401213 C
e Mus_caroli.LT608237.1                                   84363955  0 - 120012414 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Ziphius_cavirostris.ZipCav_flattened_line_761354             719  6 -      1267 I
e Zapus_hudsonius.ZapHud_scaffold_11398                      16793  7 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Xerus_inauris.XerIna_scaffold_2302                          3257  5 +    224448 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 12841 537 -     43706 I
e Vicugna_pacos.KN270157.1                                 5374072  6 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Uropsilus_gracilis.UroGra_scaffold_12083                   55372  6 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15740414  6 +  33153633 I
e Tupaia_tana.TupTan_flattened_line_306982                    1618  5 -      4186 I
e Tupaia_chinensis.KB320699.1                              2159204  5 +   4065304 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_40725                    2573 51 +     27266 I
e Tonatia_saurophila.TonSau_scaffold_294                     83151  6 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_85600                    4543  5 +     18632 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              107540  0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    389823 643 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      121344 643 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                13349  6 +     41958 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6813808  6 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629              20670  6 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Spermophilus_dauricus.KZ294078.1                         1956222  0 -   3870691 C
e Sorex_araneus.JH798187.1                                13653119  6 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_42075                     3130  9 -     30804 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    155296  6 -    313613 I
e Saiga_tatarica.SaiTat_scaffold_133311                       1161  6 +      9503 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                90011  6 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        368985  6 -   3329780 I
e Rattus_norvegicus.chr16                                 53573542  0 +  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  8679  6 +     55207 I
e Puma_concolor.QAVW01001104.1                            20276437  6 -  38429054 I
e Pteropus_vampyrus.KN525825.1                             1361922  6 +   4952924 I
e Pteropus_alecto.KB030862.1                              22978937  6 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Pteronotus_parnellii.KE909381.1                            16878  6 -     21811 I
e Psammomys_obesus.NESX01036370.1                            13232  0 -     21651 C
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_173610            536  6 +      7680 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             3967  6 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159              11230  6 +     63832 I
e Petromus_typicus.PetTyp_scaffold_221660                      871  0 -      2102 C
e Peromyscus_maniculatus.KI615324.1                       18214100  8 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14679  6 -     78924 I
e Pantholops_hodgsonii.KE114653.1                          1268562  6 -   2937107 I
e Panthera_tigris.KE722367.1                               4723374  6 -   8748460 I
e Panthera_pardus.KV860321.1                                266549  6 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  153238  6 +    230217 I
e Ovis_canadensis.OviCan_scaffold_2572                      177829  6 -    191736 I
e Ovis_aries.CM001607.2                                   17589627  6 +  44047080 I
e Otocyon_megalotis.JAEUCK010005147.1                       464401 867 -    559221 I
e Oryctolagus_cuniculus.CM000791.1                        67149665 1414 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Orcinus_orca.KB316932.1                                  2784161  6 -  10937097 I
e Onychomys_torridus.OnyTor_scaffold_2986                    83355  7 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_7387                      428  9 +    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          79160 1803 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         146844  6 +    630418 I
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Octodon_degus.JH651603.1                                  749928  0 +  11899542 C
e Ochotona_princeps.JH802162.1                             1367073  5 +   3988456 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9151314 530 -   9404916 I
e Noctilio_leporinus.NocLep_scaffold_251                    759583  6 +    783361 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5868268  6 +   7148211 I
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Nannospalax_galili.KL204518.1                            3931309  0 -   9623020 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_44643                          630  6 +     25416 I
e Myotis_lucifugus.GL429869.1                              3906328  6 -   4330536 I
e Myotis_davidii.KB100139.1                                1590216  6 -   6019432 I
e Myotis_brandtii.KE162005.1                                282898  6 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     73439  0 -     80779 C
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Muscardinus_avellanarius.MusAve_scaffold_82313              6918  8 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           9149  6 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   3323  6 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 143395  6 -    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                    29305  6 -    437263 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Miniopterus_schreibersii.MinSch_scaffold_18080             36084  6 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1852400  6 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                17806  6 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    5564  6 +     10310 I
e Mesocricetus_auratus.KB708134.1                         12184611 154 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 35599  0 +    140813 C
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Megaderma_lyra.MegLyr_scaffold_4542                        15387  6 -    207569 I
e Marmota_marmota.CZRN01000018.1                          33105375  5 -  40650429 I
e Manis_pentadactyla.KN006162.1                              53022 987 -    317179 I
e Manis_javanica.JSZB01003497.1                              20877 990 +    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_8222                 92851  6 +     94391 I
e Lycaon_pictus.CM007581.1                                17957377 535 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             270181  6 -    662738 I
e Lepus_americanus.LepAme_scaffold_107385                     8427 743 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Lasiurus_borealis.LasBor_scaffold_32767                    18900  6 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_81059                  872  6 -     18011 I
e Jaculus_jaculus.JH725527.1                               8278673 121 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_34779                1126  6 -     31341 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7523065  0 -   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                      85084  0 +    135385 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23782  0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  47158  6 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_101188               1095  6 +      9903 I
e Hipposideros_armiger.JXIK01000431.1                       112523  6 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112776  9 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20664158  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 21876  6 +     36099 I
e Helogale_parvula.HelPar_flattened_line_2585               244410  6 +    327341 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Graphiurus_murinus.GraMur_scaffold_10447                   35448  5 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            33443  5 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     611277  6 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_108840               4751  5 -      9135 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Fukomys_damarensis.KN121974.1                             852512  0 +   3816255 C
e Felis_nigripes.FelNig_flattened_line_20823                 11702  6 -     36744 I
e Felis_catus_fca126.CM031415.1                           20198042  6 + 205367284 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Eubalaena_japonica.EubJap_flattened_line_31514             27295  6 -     44125 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           13349  6 +    133382 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               35993 651 +    498745 I
e Equus_caballus.CM000403.2                               18533964 651 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1286155 651 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2149194  6 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Ellobius_talpinus.LOJH01081419.1                            3254  9 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          23333  9 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       314042  6 +    607251 I
e Eidolon_helvum.AWHC01278734.1                                731  6 +      2334 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 35526  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    38384  0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    8624 649 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  675871 642 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8632059  6 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16813920  6 +  35494412 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            69490  5 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_15900             2011  0 -     75252 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  38182  0 +     51376 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             30602  6 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_2013195               78  0 +       399 I
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_18520                 52814  0 +     63868 C
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           2481  6 +     23735 I
e Condylura_cristata.JH655891.1                           17550974 13 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1254902  0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            6469  5 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5047 647 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                       102948  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18364066  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18351806  0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     96223  6 +    217609 I
e Castor_canadensis.CasCan_scaffold_2074                    139345  5 +    179628 I
e Carollia_perspicillata.CarPer_scaffold_92756                7059  6 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                    3253  0 -     12242 C
e Capra_hircus.CM004588.1                                 18064388  6 -  44709034 I
e Capra_aegagrus.CM003241.1                               18833571  6 +  46296322 I
e Canis_lupus_orion.HG994398.1                            18502439 535 +  63665305 I
e Canis_lupus_familiaris.chr16                            17961137 535 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9036666 537 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     1966 535 -     43241 I
e CanFam4.chr16                                           17801223 537 -  60362399 I
e Camelus_ferus.KB017975.1                                  405326  6 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2337028  6 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10004556  6 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2823099  6 +   4408762 I
e Bos_taurus.CM000203.6                                   18087146  6 +  45695690 I
e Bos_mutus.JH880303.1                                     1129062  6 -   1948126 I
e Bos_indicus.CM003047.1                                  20276508  6 +  48749331 I
e Bison_bison.KN261452.1                                    203269  6 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    30657  6 +     34529 I
e Balaenoptera_bonaerensis.DF707048.1                         4502  6 -     18090 I
e Balaenoptera_acutorostrata.KI537508.1                   15194037  6 +  23207421 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6715  6 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      14769  5 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_43303               840  6 -     32520 I
e Anoura_caudifer.AnoCau_scaffold_1412                      187308  3 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          679561  6 -   2318259 I
e Allactaga_bullata.AllBul_scaffold_9566                     75924 121 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T
e Acomys_cahirinus.AcoCah_scaffold_12655                     73571  0 +     87051 C
e Acinonyx_jubatus.LLWD01001279.1                           829423  6 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      10908 2 +     62944 tc
s Allenopithecus_nigroviridis.k141_3361533                   18777 2 -     52922 Tc
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         18714 2 -     28001 Tc
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          9209 2 -     18505 Tc
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                          10062 2 -     12518 Tc
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_palliata.k141_2135620                              6678 2 +     47717 tc
i Alouatta_palliata.k141_2135620                         I 97 I 35
s Ateles_geoffroyi_b.tarseq_1536                             21210782 2 -  21539123 tc
i Ateles_geoffroyi_b.tarseq_1536                            C 0 I 130
s Ateles_belzebuth.k141_445860                               45578 2 -     48001 tc
i Ateles_belzebuth.k141_445860                           C 0 I 132
s Ateles_chamek.k141_1806455                                 28382 2 -     30947 tc
i Ateles_chamek.k141_1806455                             C 0 I 129
s Ateles_geoffroyi_a.k141_833924                               10154 2 -     89868 tc
i Ateles_geoffroyi_a.k141_833924                           C 0 I 132
s Ateles_marginatus.k141_803263                              14538 2 -     40414 tc
i Ateles_marginatus.k141_803263                          C 0 I 130
s Ateles_paniscus.k141_457735                                22427 2 +     72325 tc
i Ateles_paniscus.k141_457735                            C 0 I 129
s Cacajao_ayresi.k141_552049                                103496 2 -    122966 tc
i Cacajao_ayresi.k141_552049                             I 98 I 34
s Cacajao_calvus.k141_5142                                   62999 2 +     81800 tc
i Cacajao_calvus.k141_5142                               I 98 I 34
s Cacajao_hosomi.k141_81245                                  32181 2 -     95584 tc
i Cacajao_hosomi.k141_81245                              I 98 I 34
s Cacajao_melanocephalus.k141_619699                         56282 2 -    119600 tc
i Cacajao_melanocephalus.k141_619699                     I 98 I 34
s Carlito_syrichta.NW_007259797.1                           157567 2 -    496798 tc
i Carlito_syrichta.NW_007259797.1                        I 97 I 22
s Cephalopachus_bancanus.k141_1423433                         7064 2 +     31688 tc
i Cephalopachus_bancanus.k141_1423433                    I 97 I 22
s Cercocebus_atys.KQ010504.1                               4479730 2 +   4669795 tc
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        4229 2 +     17872 Tc
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4819 2 -     14043 Tc
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12917 2 +     27781 Tc
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        13074 2 -     20310 Tc
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          16050 2 +     29689 Tc
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10810 2 -     20078 TT
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          18721 2 -     27936 TT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            7596 2 -     17152 Tc
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38827320 2 +  39242232 Tc
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226828 2 -  21565898 Tc
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43947 2 -     53127 Tc
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        4197 2 +     13442 Tc
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       18743 2 -     27947 Tc
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1768 2 +     10558 Tc
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4777 2 +     14005 TT
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               2103 2 -     17098 tc
i Cheracebus_lucifer.k141_49986                          I 96 I 32
s Cheracebus_lugens.k141_1393925                              1979 2 +     17877 tc
i Cheracebus_lugens.k141_1393925                         I 96 I 32
s Cheracebus_regulus.k141_471822                            159544 2 -    216457 tc
i Cheracebus_regulus.k141_471822                         I 96 I 34
s Cheracebus_torquatus.k141_1170026                          64015 2 +     76511 tc
i Cheracebus_torquatus.k141_1170026                      I 96 I 32
s Chiropotes_israelita.k141_747660                          100625 2 +    146308 tc
i Chiropotes_israelita.k141_747660                       I 98 I 34
s Chiropotes_sagulatus.k141_1421488                          32432 2 -     50570 tc
i Chiropotes_sagulatus.k141_1421488                      I 98 I 34
s Chlorocebus_aethiops.ctg25                              18432647 2 -  18827391 Tc
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       19144 2 -     50209 Tc
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135426148 2 + 135778131 tc
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1914649 2 +   2368649 tc
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952897 2 + 200372422 Tc
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              41170 2 +     84244 Tc
i Colobus_polykomos.k141_906115                          C 0 C 0
s Erythrocebus_patas.Contig38                             21209319 2 -  21539334 Tc
i Erythrocebus_patas.Contig38                            C 0 C 0
s Gorilla_beringei.k141_3596273                              20153 2 -     32273 Tc
i Gorilla_beringei.k141_3596273                          C 0 I 105
s Gorilla_gorilla.LT578341.1                             186342289 2 + 186649187 tc
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hoolock_leuconedys.ctg274                                    438950 2 +    630532 TT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         16684 2 -     38430 tc
i Lagothrix_lagothricha.k141_1005387                     I 98 I 29
s Lophocebus_aterrimus.ctg367                              1441275 2 +   1826925 Tc
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                              11087 2 +     40492 Tc
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59680341 2 +  60120075 Tc
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16858 2 -     26193 Tc
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            84634 2 -    114318 Tc
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 10325 2 -     23192 Tc
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19789 2 -     29190 Tc
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  28367 2 +     37952 Tc
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186843444 2 + 187317192 tc
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25462022 2 -  25927173 tc
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  84223 2 +     89720 Tc
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                11216 2 +     20474 Tc
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  11013 2 -     14993 Tc
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333875 2 -    668171 Tc
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 9325 2 -     24072 Tc
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29956 2 -     45290 Tc
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23941544 2 -  24302211 Tc
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355659 2 +    752769 Tc
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Miopithecus_ogouensis.k141_534055                          13225 2 -     28506 Tc
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Nasalis_larvatus.k141_413338                               19275 2 +     21681 Tc
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Pan_paniscus.KQ411613.1                                    48254 2 +     80009 tc
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189147110 2 + 189151597 tc
i Pan_troglodytes.CM009242.2                             I 58 I 102
s Papio_anubis.CM001495.2                                183447348 2 + 183742232 tc
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            10998 2 +     20448 Tc
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567806 2 +  20919399 Tc
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   9738 2 +     41871 TC
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    13031 2 +     27711 Tc
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  4030 2 -     11374 Tc
i Papio_ursinus.k141_5274964                             C 0 C 0
s Piliocolobus_badius.k141_1142974                            2353 2 +     68526 Tc
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        42498 2 +     89929 Tc
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43912 2 +     51399 Tc
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14300149 2 -  14605196 tc
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1476471                              5896 2 +     26961 tc
i Pithecia_albicans.k141_1476471                         I 98 I 34
s Pithecia_chrysocephala.k141_839575                          2024 2 +     23417 tc
i Pithecia_chrysocephala.k141_839575                     I 98 I 34
s Pithecia_hirsuta.k141_305604                                5888 2 +     29694 tc
i Pithecia_hirsuta.k141_305604                           I 98 I 34
s Pithecia_mittermeieri.k141_446740                          30914 2 +     52772 tc
i Pithecia_mittermeieri.k141_446740                      I 98 I 34
s Pithecia_pissinattii.k141_1824269                           5910 2 +     26198 tc
i Pithecia_pissinattii.k141_1824269                      I 98 I 34
s Pithecia_pithecia.tarseq_165                             3942441 2 +   4542175 tc
i Pithecia_pithecia.tarseq_165                           I 98 I 34
s Pithecia_vanzolinii.k141_1697688                            5874 2 -     23490 tc
i Pithecia_vanzolinii.k141_1697688                       I 98 I 34
s Plecturocebus_bernhardi.k141_2549090                       10127 2 -     39866 tc
i Plecturocebus_bernhardi.k141_2549090                   I 98 I 41
s Plecturocebus_brunneus.k141_1495506                        19293 2 +     34906 tc
i Plecturocebus_brunneus.k141_1495506                    I 98 I 39
s Plecturocebus_caligatus.k141_1382851                       23555 2 +     87950 tc
i Plecturocebus_caligatus.k141_1382851                   I 98 I 39
s Plecturocebus_cinerascens.k141_1164729                     24384 2 +     88961 tc
i Plecturocebus_cinerascens.k141_1164729                 I 98 I 40
s Plecturocebus_cupreus.k141_2351393                         10052 2 +     39403 tc
i Plecturocebus_cupreus.k141_2351393                     I 98 I 39
s Plecturocebus_dubius.k141_1058799                          23836 2 -     87928 tc
i Plecturocebus_dubius.k141_1058799                      I 98 I 38
s Plecturocebus_grovesi.k141_2013005                         30795 2 +     60166 tc
i Plecturocebus_grovesi.k141_2013005                     I 98 I 40
s Plecturocebus_hoffmannsi.k141_3303950                      30992 2 +     67232 tc
i Plecturocebus_hoffmannsi.k141_3303950                  I 98 I 39
s Plecturocebus_miltoni.k141_349282                          26465 2 +     90634 tc
i Plecturocebus_miltoni.k141_349282                      I 98 I 39
s Plecturocebus_moloch.k141_1031110                          23837 2 -     89403 tc
i Plecturocebus_moloch.k141_1031110                      I 98 I 40
s Pongo_abelii.CM009266.2                                189135264 2 + 189387572 tc
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9574874 2 +   9816681 Tc
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               77452 2 -     81375 Tc
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              9283 2 +     19060 Tc
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Pygathrix_cinerea.k141_1153803                             19262 2 -     91421 Tc
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7613385 2 +   7812017 Tc
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             19292 2 -     72585 Tc
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                            10959 2 -     11128 Tc
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91240325 2 - 195417433 tc
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675974 2 +   7961872 Tc
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Semnopithecus_entellus.k141_1672505                         4133 2 -     12572 Tc
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30985 2 +     39453 Tc
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           11489 2 +     27826 Tc
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            11034 2 -     19483 Tc
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      4332 2 -     12762 Tc
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           4177 2 +     13763 Tc
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Tarsius_lariang.k141_2201908                               28063 2 +     70052 tc
i Tarsius_lariang.k141_2201908                           I 97 I 22
s Tarsius_wallacei.k141_254427                                2860 2 -     16117 tc
i Tarsius_wallacei.k141_254427                           I 97 I 22
s Theropithecus_gelada.CM009954.1                        186432656 2 + 186847797 tc
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                         15071 2 -     20410 Tc
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      4194 2 -     12674 Tc
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       15179 2 +     19930 Tc
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      11581 2 -     19997 Tc
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            51722 2 -     60166 Tc
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        19185 2 -     27529 Tc
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                        817 2 +      9229 Tc
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          12719 2 -     21137 Tc
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                     819 2 +      9131 Tc
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                          783 2 -      3730 Tc
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        29051 2 +     32220 Tc
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5943148 2 +   6242583 Tc
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       12400 2 +     20839 Tc
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202 0 +      8798 C
e Galago_senegalensis.k141_631886                             7400 0 +     11339 C
e Galago_moholi.ctg2040                                     429710 0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964 2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Alouatta_seniculus.k141_117119                             17657 14 +     50774 I
e Alouatta_puruensis.k141_362188                              3206 14 +      5663 I
e Alouatta_nigerrima.k141_1929159                             2484 14 +     30492 I
e Alouatta_macconnelli.k141_918386                            3526 14 -      9457 I
e Alouatta_juara.k141_1302312                                 2438 14 +     27940 I
e Alouatta_discolor.k141_566626                              13966 14 +     28687 I
e Alouatta_caraya.k141_1701091                                3513 14 -     36483 I
e Alouatta_belzebul.k141_3560514                             10406 14 +     51355 I
e Mus_pahari.LT608297.1                                   31358180 0 -  89631738 C
e Mus_spretus.CM004101.1                                  90755945 0 - 130317789 C
e Mus_musculus.chr8                                       87653455 0 - 129401213 C
e Mus_caroli.LT608237.1                                   84363955 0 - 120012414 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445 0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734 0 -     33856 C
e Perodicticus_potto.k141_1186926                              597 0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219 0 -      3244 C
e Ziphius_cavirostris.ZipCav_flattened_line_761354             719 6 -      1267 I
e Zapus_hudsonius.ZapHud_scaffold_11398                      16793 7 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Xerus_inauris.XerIna_scaffold_2302                          3257 5 +    224448 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 12841 537 -     43706 I
e Vicugna_pacos.KN270157.1                                 5374072 6 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Uropsilus_gracilis.UroGra_scaffold_12083                   55372 6 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15740414 6 +  33153633 I
e Tupaia_tana.TupTan_flattened_line_306982                    1618 5 -      4186 I
e Tupaia_chinensis.KB320699.1                              2159204 5 +   4065304 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_40725                    2573 51 +     27266 I
e Tonatia_saurophila.TonSau_scaffold_294                     83151 6 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_85600                    4543 5 +     18632 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              107540 0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    389823 643 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      121344 643 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                13349 6 +     41958 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6813808 6 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629              20670 6 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Spermophilus_dauricus.KZ294078.1                         1956222 0 -   3870691 C
e Sorex_araneus.JH798187.1                                13653119 6 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_42075                     3130 9 -     30804 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    155296 6 -    313613 I
e Saiga_tatarica.SaiTat_scaffold_133311                       1161 6 +      9503 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                90011 6 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        368985 6 -   3329780 I
e Rattus_norvegicus.chr16                                 53573542 0 +  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  8679 6 +     55207 I
e Puma_concolor.QAVW01001104.1                            20276437 6 -  38429054 I
e Pteropus_vampyrus.KN525825.1                             1361922 6 +   4952924 I
e Pteropus_alecto.KB030862.1                              22978937 6 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Pteronotus_parnellii.KE909381.1                            16878 6 -     21811 I
e Psammomys_obesus.NESX01036370.1                            13232 0 -     21651 C
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_173610            536 6 +      7680 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             3967 6 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159              11230 6 +     63832 I
e Petromus_typicus.PetTyp_scaffold_221660                      871 0 -      2102 C
e Peromyscus_maniculatus.KI615324.1                       18214100 8 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14679 6 -     78924 I
e Pantholops_hodgsonii.KE114653.1                          1268562 6 -   2937107 I
e Panthera_tigris.KE722367.1                               4723374 6 -   8748460 I
e Panthera_pardus.KV860321.1                                266549 6 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  153238 6 +    230217 I
e Ovis_canadensis.OviCan_scaffold_2572                      177829 6 -    191736 I
e Ovis_aries.CM001607.2                                   17589627 6 +  44047080 I
e Otocyon_megalotis.JAEUCK010005147.1                       464401 867 -    559221 I
e Oryctolagus_cuniculus.CM000791.1                        67149665 1414 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Orcinus_orca.KB316932.1                                  2784161 6 -  10937097 I
e Onychomys_torridus.OnyTor_scaffold_2986                    83355 7 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_7387                      428 9 +    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          79160 1803 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         146844 6 +    630418 I
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Octodon_degus.JH651603.1                                  749928 0 +  11899542 C
e Ochotona_princeps.JH802162.1                             1367073 5 +   3988456 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869 0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414 0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947 0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9151314 530 -   9404916 I
e Noctilio_leporinus.NocLep_scaffold_251                    759583 6 +    783361 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5868268 6 +   7148211 I
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Nannospalax_galili.KL204518.1                            3931309 0 -   9623020 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_44643                          630 6 +     25416 I
e Myotis_lucifugus.GL429869.1                              3906328 6 -   4330536 I
e Myotis_davidii.KB100139.1                                1590216 6 -   6019432 I
e Myotis_brandtii.KE162005.1                                282898 6 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     73439 0 -     80779 C
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Muscardinus_avellanarius.MusAve_scaffold_82313              6918 8 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           9149 6 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398 7 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   3323 6 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 143395 6 -    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                    29305 6 -    437263 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Miniopterus_schreibersii.MinSch_scaffold_18080             36084 6 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1852400 6 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                17806 6 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    5564 6 +     10310 I
e Mesocricetus_auratus.KB708134.1                         12184611 154 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 35599 0 +    140813 C
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Megaderma_lyra.MegLyr_scaffold_4542                        15387 6 -    207569 I
e Marmota_marmota.CZRN01000018.1                          33105375 5 -  40650429 I
e Manis_pentadactyla.KN006162.1                              53022 987 -    317179 I
e Manis_javanica.JSZB01003497.1                              20877 990 +    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_8222                 92851 6 +     94391 I
e Lycaon_pictus.CM007581.1                                17957377 535 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             270181 6 -    662738 I
e Lepus_americanus.LepAme_scaffold_107385                     8427 743 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Lasiurus_borealis.LasBor_scaffold_32767                    18900 6 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_81059                  872 6 -     18011 I
e Jaculus_jaculus.JH725527.1                               8278673 121 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_34779                1126 6 -     31341 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7523065 0 -   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                      85084 0 +    135385 C
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23782 0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  47158 6 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_101188               1095 6 +      9903 I
e Hipposideros_armiger.JXIK01000431.1                       112523 6 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112776 9 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20664158 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 21876 6 +     36099 I
e Helogale_parvula.HelPar_flattened_line_2585               244410 6 +    327341 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Graphiurus_murinus.GraMur_scaffold_10447                   35448 5 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            33443 5 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     611277 6 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_108840               4751 5 -      9135 I
e Galagoides_demidoff.k141_1711393                            4689 0 +     41679 C
e Fukomys_damarensis.KN121974.1                             852512 0 +   3816255 C
e Felis_nigripes.FelNig_flattened_line_20823                 11702 6 -     36744 I
e Felis_catus_fca126.CM031415.1                           20198042 6 + 205367284 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Eubalaena_japonica.EubJap_flattened_line_31514             27295 6 -     44125 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           13349 6 +    133382 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               35993 651 +    498745 I
e Equus_caballus.CM000403.2                               18533964 651 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1286155 651 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2149194 6 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Ellobius_talpinus.LOJH01081419.1                            3254 9 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          23333 9 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       314042 6 +    607251 I
e Eidolon_helvum.AWHC01278734.1                                731 6 +      2334 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 35526 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    38384 0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    8624 649 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  675871 642 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8632059 6 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16813920 6 +  35494412 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            69490 5 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_15900             2011 0 -     75252 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  38182 0 +     51376 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             30602 6 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_2013195               78 0 +       399 I
e Cricetulus_griseus.LT883664.1                           11668671 0 + 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_18520                 52814 0 +     63868 C
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           2481 6 +     23735 I
e Condylura_cristata.JH655891.1                           17550974 13 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1254902 0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            6469 5 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5047 647 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                       102948 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18364066 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18351806 0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     96223 6 +    217609 I
e Castor_canadensis.CasCan_scaffold_2074                    139345 5 +    179628 I
e Carollia_perspicillata.CarPer_scaffold_92756                7059 6 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                    3253 0 -     12242 C
e Capra_hircus.CM004588.1                                 18064388 6 -  44709034 I
e Capra_aegagrus.CM003241.1                               18833571 6 +  46296322 I
e Canis_lupus_orion.HG994398.1                            18502439 535 +  63665305 I
e Canis_lupus_familiaris.chr16                            17961137 535 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9036666 537 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     1966 535 -     43241 I
e CanFam4.chr16                                           17801223 537 -  60362399 I
e Camelus_ferus.KB017975.1                                  405326 6 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2337028 6 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10004556 6 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2823099 6 +   4408762 I
e Bos_taurus.CM000203.6                                   18087146 6 +  45695690 I
e Bos_mutus.JH880303.1                                     1129062 6 -   1948126 I
e Bos_indicus.CM003047.1                                  20276508 6 +  48749331 I
e Bison_bison.KN261452.1                                    203269 6 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    30657 6 +     34529 I
e Balaenoptera_bonaerensis.DF707048.1                         4502 6 -     18090 I
e Balaenoptera_acutorostrata.KI537508.1                   15194037 6 +  23207421 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6715 6 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         538 0 +      5281 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      14769 5 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_43303               840 6 -     32520 I
e Anoura_caudifer.AnoCau_scaffold_1412                      187308 3 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          679561 6 -   2318259 I
e Allactaga_bullata.AllBul_scaffold_9566                     75924 121 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T
e Acomys_cahirinus.AcoCah_scaffold_12655                     73571 0 +     87051 C
e Acinonyx_jubatus.LLWD01001279.1                           829423 6 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      10910 105 +     62944 ggg--------------catgg-ggtgcatgcctgtaat-cc-agctacttgggaggc-tgaggtgggataatcgtttgaacccgggaggccgaggttgcagtgagccgagatcacaccactg
s Allenopithecus_nigroviridis.k141_3361533                   18779 106 -     52922 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttgggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccactg
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         18716 106 -     28001 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttgggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccacgg
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          9211 106 -     18505 ggg--------------cgtgg-ggtgcacgcctgtaat-cccagctacttgggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccactg
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                          10064 106 -     12518 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttgggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccacgg
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             10420  69 +     51355 ggg--------------catggtggtgcatgcctgtaat-cctagttgcttaggaggc-tgaggtgggagaatcgcttgaaccca--------------------------------------
i Alouatta_belzebul.k141_3560514                         I 14 I 37
s Alouatta_caraya.k141_1701091                                3527  69 -     36483 ggg--------------catggtggtgcatgcctgtaat-cctagttgcttaggaggc-tgaggtgggagaatcgcttgaaccca--------------------------------------
i Alouatta_caraya.k141_1701091                           I 14 I 37
s Alouatta_discolor.k141_566626                              13980  69 +     28687 ggg--------------cgtggtggtgcatgcctgtaat-cctagttgcttaggaggc-tgaggtgggagaatcgcttgaaccca--------------------------------------
i Alouatta_discolor.k141_566626                          I 14 I 37
s Alouatta_juara.k141_1302312                                 2452  69 +     27940 ggg--------------catggtggtgcatgcctgtaat-cctagttgcttaggaggc-tgaggtgggagaatcgcttgaacaca--------------------------------------
i Alouatta_juara.k141_1302312                            I 14 I 37
s Alouatta_macconnelli.k141_918386                            3540  69 -      9457 ggg--------------catggtggtacatgcctgtaat-cctagttgcttaggaggc-tgaggtgggagaatcgcttgaaccca--------------------------------------
i Alouatta_macconnelli.k141_918386                       I 14 I 37
s Alouatta_nigerrima.k141_1929159                             2498  69 +     30492 ggg--------------catggtggtacatgcctgtaat-cctagttgcttaggaggc-tgaggtgggagaatcgcttgaaccca--------------------------------------
i Alouatta_nigerrima.k141_1929159                        I 14 I 37
s Alouatta_palliata.k141_2135620                              6715  69 +     47717 ggg--------------catggtggtacatgcctataat-cctagttgcttaggaggc-cgaggtgggagaatcgcttgaaccca--------------------------------------
i Alouatta_palliata.k141_2135620                         I 35 I 37
s Alouatta_puruensis.k141_362188                              3220  69 +      5663 ggg--------------catggtggtgcatgcctgtaat-cctagttgcttaggaggc-tgaggtgggagaatcgcttgaaccca--------------------------------------
i Alouatta_puruensis.k141_362188                         I 14 I 37
s Alouatta_seniculus.k141_117119                             17671  69 +     50774 ggg--------------catggtggtgcatgcctgtaat-cctagttgcttaggaggc-tgaggtgggagaatcgcttgaacaca--------------------------------------
i Alouatta_seniculus.k141_117119                         I 14 I 37
s Ateles_geoffroyi_b.tarseq_1536                             21210914  69 -  21539123 ggg--------------catggtggtgcatgactgtaat-cctagttgcttaggaggc-tgaggtgggagaatcgcttgaaccca--------------------------------------
i Ateles_geoffroyi_b.tarseq_1536                            I 130 I 37
s Ateles_belzebuth.k141_445860                               45712  69 -     48001 ggg--------------cctggtggtgcatgactgtaat-cctagttgcttaggaggc-tgaggtgggagaatcgcttgaaccca--------------------------------------
i Ateles_belzebuth.k141_445860                           I 132 I 37
s Ateles_chamek.k141_1806455                                 28513  69 -     30947 ggg--------------catggtggtgcatgactgtaat-cctagttgcttaggaggc-tgaggtgggagaatcgcttgaaccca--------------------------------------
i Ateles_chamek.k141_1806455                             I 129 I 37
s Ateles_geoffroyi_a.k141_833924                               10288  69 -     89868 ggg--------------catggtggtgcatgactgtaat-cctagttgcttaggaggc-tgaggtgggagaatcgcttgaaccca--------------------------------------
i Ateles_geoffroyi_a.k141_833924                           I 132 I 37
s Ateles_marginatus.k141_803263                              14670  69 -     40414 ggg--------------catggtggtgcatgactgtaat-cctagttgcttaggaggc-tgaggtgggagaatcgcttgaaccca--------------------------------------
i Ateles_marginatus.k141_803263                          I 130 I 37
s Ateles_paniscus.k141_457735                                22558  69 +     72325 ggg--------------catggtggtgcatgactgtaat-cctagttgcttaggaggc-tgaggtgggagaatcgcttgaaccca--------------------------------------
i Ateles_paniscus.k141_457735                            I 129 I 37
s Cacajao_ayresi.k141_552049                                103532  69 -    122966 ggg--------------catggtggtgcatgcctataat-cccagctgcttaagaggc-tgaggcgggagaatcgcttgaaccca--------------------------------------
i Cacajao_ayresi.k141_552049                             I 34 I 37
s Cacajao_calvus.k141_5142                                   63035  69 +     81800 ggg--------------catggtggtgcatgcctataat-cccagctgcttaagaggc-taaggtgggagaatcgcttgaaccca--------------------------------------
i Cacajao_calvus.k141_5142                               I 34 I 37
s Cacajao_hosomi.k141_81245                                  32217  69 -     95584 ggg--------------catggtggtgcatgcctataat-cccagctgcttaagaggc-tgaggcgggagaatcgcttgaaccca--------------------------------------
i Cacajao_hosomi.k141_81245                              I 34 I 37
s Cacajao_melanocephalus.k141_619699                         56318  69 -    119600 ggg--------------catggtggtgcatgcctataat-cccagctgcttaagaggc-tgaggtgggagaatcgcttgaaccca--------------------------------------
i Cacajao_melanocephalus.k141_619699                     I 34 I 37
s Carlito_syrichta.NW_007259797.1                           157591 106 -    496798 ggg--------------catggtagctcgcgcctatagt-tctggctacttagaaggc-tgaggccgaaggattgccggatcccagtaGGTCGTTGCTGGTGTG-Gaagtgagcatgacactg
i Carlito_syrichta.NW_007259797.1                        I 22 C 0
s Cephalopachus_bancanus.k141_1423433                         7088 106 +     31688 ggg--------------catggtagctcgtgcctatagt-tctggctacttagaaggc-tgagacctaaggattgcgggatcccagcaggtcgttgctggtgtg-gaagtgagcatgacactg
i Cephalopachus_bancanus.k141_1423433                    I 22 C 0
s Cercocebus_atys.KQ010504.1                               4479732 106 +   4669795 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttcggagac-tgaggtgggagaatcgtttgaacccaagaggccaaggttgcagtgagccgagatcacaacactg
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        4231 106 +     17872 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttcggagac-tgaggtgggagaatcatttgaacccaagaggccacggttgcagtgagccgagatcacaacactg
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4821 106 -     14043 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttcggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgaggtcacaacactg
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          12919 106 +     27781 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttcggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgaggtcacaacactg
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        13076 106 -     20310 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttgggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccactg
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          16052 106 +     29689 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttgggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccactg
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10812 106 -     20078 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttgggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccactg
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          18723 106 -     27936 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttgggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccactg
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            7598 106 -     17152 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttgggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccactg
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38827322 106 +  39242232 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttgggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccactg
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226830 106 -  21565898 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttgggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccactg
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       43949 106 -     53127 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttgggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccactg
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        4199 106 +     13442 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttgggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccactg
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       18745 106 -     27947 ggg--------------catgg-ggtgcacgcctgaaat-cccagctacttgggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgatatcacaccactg
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1770 106 +     10558 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttgggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccactg
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4779 106 +     14005 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttgggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccactg
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               2137  69 -     17098 ggg--------------catggtggttcatgcctataat-cccagctgcttaagaggc-tgaggtgggagaattgcttgaaccca--------------------------------------
i Cheracebus_lucifer.k141_49986                          I 32 I 37
s Cheracebus_lugens.k141_1393925                              2013  69 +     17877 ggg--------------catggtggtgcatgcctataat-cccagctgcttaagaggc-tgaggtgggagaattgcttgaaccca--------------------------------------
i Cheracebus_lugens.k141_1393925                         I 32 I 37
s Cheracebus_regulus.k141_471822                            159580  69 -    216457 ggg--------------catggtggtgcatgcctataat-cccagctgcttaagaggc-tgaggtgggagaattgcttgaaccca--------------------------------------
i Cheracebus_regulus.k141_471822                         I 34 I 37
s Cheracebus_torquatus.k141_1170026                          64049  69 +     76511 ggg--------------catggtggtgcatgcctataat-cccagctgcttaagaggc-tgaggtgggagaattgcttgaaccca--------------------------------------
i Cheracebus_torquatus.k141_1170026                      I 32 I 37
s Chiropotes_israelita.k141_747660                          100661  69 +    146308 ggg--------------catggtggtgcatgcctataat-cccagctgcttaggacgc-tgaggtgggagaatcgcttgaaccca--------------------------------------
i Chiropotes_israelita.k141_747660                       I 34 I 37
s Chiropotes_sagulatus.k141_1421488                          32468  69 -     50570 ggg--------------catggtggtgcatgcctataat-cccagctgcttaggatgc-agaggtgggagaatcgcttgaaccca--------------------------------------
i Chiropotes_sagulatus.k141_1421488                      I 34 I 37
s Chlorocebus_aethiops.ctg25                              18432649 106 -  18827391 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttggaagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccactg
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       19146 106 -     50209 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttgggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccactg
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135426150 106 + 135778131 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttgggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccactg
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1914651 106 +   2368649 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttgggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacatcactg
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199952899 106 + 200372422 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttgggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccactg
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              41172 106 +     84244 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttgggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccactg
i Colobus_polykomos.k141_906115                          C 0 C 0
s Erythrocebus_patas.Contig38                             21209321 106 -  21539334 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttgggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccactg
i Erythrocebus_patas.Contig38                            C 0 C 0
s Gorilla_beringei.k141_2066350                                315 105 +      1742 ggg--------------tatgg-ggtgcatgcctgtaat-cc-agctacttgggaggc-tgaggtgggagaatcgtttgaacccgggaggccgaggttgcagtgagccaagatcacaccactg
i Gorilla_beringei.k141_2066350                          n 105 I 15
s Gorilla_gorilla.LT578341.1                             186342291 105 + 186649187 ggg--------------catgg-ggtgcatgcctgtaat-cc-agctacttgggaggc-tgaggtgggataatcgtttgaacccgggaggccgaggttgcagtgagccaagatcacaccactg
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hoolock_leuconedys.ctg274                                    438952 106 +    630532 ggg--------------catgg-ggtgaatgcctgtaat-cccagctacttgggaggc-tgaggtgggagaatcgtttgaacccgggaggctgaggttgcagtgagccgagatcacaacaccg
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         16715  69 -     38430 ggg--------------catggtgctgcatgactgtaat-cctagttgctgaggaggc-tgaggtgggaaaatcgcttgaacaca--------------------------------------
i Lagothrix_lagothricha.k141_1005387                     I 29 I 37
s Lophocebus_aterrimus.ctg367                              1441277 106 +   1826925 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttcggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccactg
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                              11089 106 +     40492 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttcggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccactg
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59680343 106 +  60120075 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttcggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccactg
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16860 106 -     26193 ggg--------------catgg-ggtgcacgactgtaat-cccagctacttcggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccactg
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            84636 106 -    114318 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttcggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccactg
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 10327 106 -     23192 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttcggagac-tgaggtgggagaatcatttgaacccaagatgccaaggttgcagtgagccgagatcacaccactg
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19791 106 -     29190 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttcggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccactg
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  28369 106 +     37952 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttcggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccactg
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186843446 106 + 187317192 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttcggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccactg
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25462024 106 -  25927173 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttcggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccactg
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  84225 106 +     89720 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttcggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccactg
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                11218 106 +     20474 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttcggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccactg
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  11015 106 -     14993 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttcggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccactg
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333877 106 -    668171 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttcggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccactg
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 9327 106 -     24072 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttcggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccactg
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               29958 106 -     45290 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttcggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccactg
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23941546 106 -  24302211 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttcggagac-tgaggtgggagaatcatttgaatccaagaggccaaggttgcagtgagccgagatcacaccactg
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355661 106 +    752769 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttcggagac-tgaggtgggagaatcatttgaatccaagaggccaaggttgcagtgagccgagatcacaccactg
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Miopithecus_ogouensis.k141_534055                          13227 106 -     28506 ggg--------------catgg-ggtgcacacctgtaat-cccagctacttgggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccactg
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Nasalis_larvatus.k141_413338                               19277 106 +     21681 agg--------------cacgg-ggtgcacgcctgtaat-cccagctacttgggagac-tgaggtggaagaatcatttgaacccaagaggccaaggttgcagtgagctgagatcataccactg
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Pan_paniscus.KQ411613.1                                    48256 105 +     80009 ggg--------------catgg-ggtgcatgcctgtaat-cc-agctacttgggaggc-tgaggtgggataatcgtttcaacccgggaggccgaggttgcagtgagccgagatcacaccactg
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.KZ622849.1                                 26445 105 +    110857 ggg--------------catgg-ggtgcatgcctgtaat-cc-agctacttgggaggc-tgaggtgggataatcgtttgaacccgggaggccgaggttgcagtgagccgagatcacaccactg
i Pan_troglodytes.KZ622849.1                             I 370 I 92
s Papio_anubis.CM001495.2                                183447350 106 + 183742232 ggg--------------catgg-ggtgcatgcctgtaat-cccagctacttcggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccactg
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            11000 106 +     20448 ggg--------------catgg-ggtgcatgcctgtaat-cccagctacttcggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccactg
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567808 106 +  20919399 ggg--------------catgg-ggtgcatgcctgtaat-cccagctacttcggagac-cgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccactg
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   9740 120 +     41871 GGGCATGGTGGCTcgggcatgg-ggtgcacgcctgtaat-cccagctacttcggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcggtgagccgagatcacaccactg
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    13033 106 +     27711 ggg--------------catgg-ggtgcatgcctgtaat-cccagctacttcggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccactg
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  4032 106 -     11374 ggg--------------catgg-ggtgcatgcctgtaat-cccagctacttcggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccactg
i Papio_ursinus.k141_5274964                             C 0 C 0
s Piliocolobus_badius.k141_1142974                            2355 106 +     68526 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttgggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccactg
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        42500 106 +     89929 agg--------------catgg-ggtgcatgcctgtaat-cccagctacttgggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccactg
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            43914 106 +     51399 agg--------------catgg-ggtgcacgcctgtaat-cccagctacttgggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccactg
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14300151 106 -  14605196 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttgggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccactg
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1476471                              5932  69 +     26961 ggg--------------catggtggtgcatgcctataat-cccagctgcttaagaggc-tgaggtgggagaattgcttgaaccca--------------------------------------
i Pithecia_albicans.k141_1476471                         I 34 I 37
s Pithecia_chrysocephala.k141_839575                          2060  69 +     23417 ggg--------------catggtggcgcatgcctataat-cccagctgcttaagaggc-tgaggtgggagaatcgcttgaaccca--------------------------------------
i Pithecia_chrysocephala.k141_839575                     I 34 I 37
s Pithecia_hirsuta.k141_305604                                5924  69 +     29694 ggg--------------catggtggtgcatgcctataat-cccagctgcttaagaggc-tgaggtgggagaattgcttgaaccca--------------------------------------
i Pithecia_hirsuta.k141_305604                           I 34 I 37
s Pithecia_mittermeieri.k141_446740                          30950  69 +     52772 ggg--------------catggtggtgcatgcctataat-cccagctgcttaagaggc-tgaggtgggagaattgcttgaaccca--------------------------------------
i Pithecia_mittermeieri.k141_446740                      I 34 I 37
s Pithecia_pissinattii.k141_1824269                           5946  69 +     26198 ggg--------------catggtggtgcatgcctataat-cccagctgcttaagaggc-tgaggtgggagaattgcttgaaccca--------------------------------------
i Pithecia_pissinattii.k141_1824269                      I 34 I 37
s Pithecia_pithecia.tarseq_165                             3942477  69 +   4542175 ggg--------------catggtggtgcatgcctataat-cccagctgcttaagaggc-tgaggtgggagaatcgcttgaaccca--------------------------------------
i Pithecia_pithecia.tarseq_165                           I 34 I 37
s Pithecia_vanzolinii.k141_1697688                            5910  69 -     23490 ggg--------------catggtggtgcatgcctataat-cccagctgcttaagaggc-tgaggtgggagaattgcttgaaccca--------------------------------------
i Pithecia_vanzolinii.k141_1697688                       I 34 I 37
s Plecturocebus_bernhardi.k141_2549090                       10170  69 -     39866 gag--------------catggtggtgcatgcctataat-cccagctgcttaagaggc-tgaggtgggagaattgcttgaaccca--------------------------------------
i Plecturocebus_bernhardi.k141_2549090                   I 41 I 37
s Plecturocebus_brunneus.k141_1495506                        19334  69 +     34906 ggg--------------catggtggtgcatgcctataat-cccagctgcttaagaggc-tgaggtgggagaattgcttgaaccca--------------------------------------
i Plecturocebus_brunneus.k141_1495506                    I 39 I 37
s Plecturocebus_caligatus.k141_1382851                       23596  69 +     87950 agg--------------catggtggtgcatgcctataat-cccagctgcttaagaggc-tgaggtgggagaattgcttgaaccca--------------------------------------
i Plecturocebus_caligatus.k141_1382851                   I 39 I 37
s Plecturocebus_cinerascens.k141_1164729                     24426  69 +     88961 ggg--------------catggtggtgcatgcctataat-cccagctgcttaagaggc-tgaggtgggagaattgcttgaaccca--------------------------------------
i Plecturocebus_cinerascens.k141_1164729                 I 40 I 37
s Plecturocebus_cupreus.k141_2351393                         10093  69 +     39403 ggg--------------catggtggtgcatgcctataat-cccagctgcttaagaggc-tgaggtgggagaattgcttgaaccca--------------------------------------
i Plecturocebus_cupreus.k141_2351393                     I 39 I 37
s Plecturocebus_dubius.k141_1058799                          23876  69 -     87928 ggg--------------catggtggtgcatgcctataat-cccagctgcttaagaggc-tgaggtgggagaattgcttgaaccca--------------------------------------
i Plecturocebus_dubius.k141_1058799                      I 38 I 37
s Plecturocebus_grovesi.k141_2013005                         30837  69 +     60166 ggg--------------catggtggtgcatgcctataat-cccagctgcttaagaggc-tgaggtgggagaattgcttgaaccca--------------------------------------
i Plecturocebus_grovesi.k141_2013005                     I 40 I 37
s Plecturocebus_hoffmannsi.k141_3303950                      31033  69 +     67232 ggg--------------catggtggtgcatgcctataat-cccagctgcttaagaggc-tgaggtgggagaattgcttgaaccca--------------------------------------
i Plecturocebus_hoffmannsi.k141_3303950                  I 39 I 37
s Plecturocebus_miltoni.k141_349282                          26506  69 +     90634 ggg--------------catggtggtgcatgcctataat-cccagctgcttaagaggc-tgaggtgggagaattgcttgaaccca--------------------------------------
i Plecturocebus_miltoni.k141_349282                      I 39 I 37
s Plecturocebus_moloch.k141_1031110                          23879  69 -     89403 ggg--------------catggtggtgcatgcctataat-cccagctgcttaagaggc-tgaggtgggagaattgcttgaaccca--------------------------------------
i Plecturocebus_moloch.k141_1031110                      I 40 I 37
s Pongo_abelii.CM009266.2                                189135266 106 + 189387572 agg--------------catgg-ggtgcatgcctgtaatccc-agctacttgggaggc-tgaggtgggagaatcatttgaacccaggaggccgaggttgcagtgagctgagatcacaacactg
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9574876 106 +   9816681 agg--------------catgg-ggtgcatgcctgtaatccc-agctacttgggaggc-tgaggtgggagaatcatttgaacccaggaggccgaggttgcagtgagctgagatcacaacactg
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               77454 106 -     81375 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttgggagac-tgaggtggaagaatcatttgaacccaagaggccaaggttgcagtgagctgagatcataccactg
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              9285 106 +     19060 agg--------------catgg-ggtgcacgcctgtaat-cccagctacttgggagac-tgaggtggaagaatcatttgaacccaagaggccaaggttgcagtgagctgagatcatgccactg
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Pygathrix_cinerea.k141_1153803                             19264 106 -     91421 ggg--------------cacgg-ggtgcacgcctgtcat-cccagctacttgggagac-tgacgtggaagaatcatttgaacccaagaggccaaggttgcagtgagctgagatcataccactg
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7613387 106 +   7812017 ggg--------------cacgg-ggtgcacgcctgtcat-cccagctacttgggagac-tgacgtggaagaatcatttgaacccaagaggccaaggttgcagtgagctgagatcataccactg
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             19294 106 -     72585 ggg--------------cacgg-ggtgcacgcctgtcat-cccagctacttgggagac-tgacgtggaagaatcatttgaacccaagaggccaaggttgcagtgagctgagatcataccactg
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                            10961 106 -     11128 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttgggagac-tgaggtggaagaatcatttgaacccaagaggccaaggttgcagtgagctgagatcataccactg
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91240327 106 - 195417433 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttgggagac-tgaggtggaagaatcatttgaacccaagaggccaaggttgcagtgagctgagatcataccactg
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7675976 106 +   7961872 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttgcgagac-tgaggtggaagaatcatttgaacccaagaggccaaggttgcagtgagctgagatcataccactg
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Semnopithecus_entellus.k141_1672505                         4135 106 -     12572 ggg--------------catgg-ggtgcacgcctgtaat-ctcagctacttgggagac-tgaggtggaagaatcatttgaacccaagaggccaaggttgcagtgagctgagatcataccactg
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      30987 106 +     39453 ggg--------------catgg-ggtgcacgcctgtaat-ctcagctacttgggagac-tgaggtggaagaatcatttgaacccaagaggccaaggttgcagtgagctgagatcataccactg
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           11491 106 +     27826 ggg--------------catgg-ggtgcacgcctgtaat-ctcagctacttgggagac-tgaggtggaagaatcatttgaacccaagaggccaaggttgcagtgagctgagatcataccactg
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            11036 106 -     19483 ggg--------------catgg-ggtgcacgcctgtaat-ctcagctacttgggagac-tgaggtggaagaatcatttgaacccaagaggccaaggttgcagtgagctgagatcataccactg
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      4334 106 -     12762 ggg--------------catgg-ggtgcacgcctgtaat-ctcagctacttgggagac-tgaggtggaagaatcatttgaacccaagaggccaaggttgcagtgagctgagatcataccactg
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           4179 106 +     13763 ggg--------------catgg-ggtgcaagcctgtaat-ctcagctacttgggagac-tgaggtggaagaatcatttgaacccaagaggccaaggttgcagtgagctgagatcataccactg
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Tarsius_lariang.k141_2201908                               28087 106 +     70052 tgc--------------catggtagctcgtgcctatagt-tccggctacttagaaggc-tgaggccgaaggatcgccagatcacagcaggtcatcgctgatgtg-gaagtgagcatgccactg
i Tarsius_lariang.k141_2201908                           I 22 C 0
s Tarsius_wallacei.k141_254427                                2884 106 -     16117 tgc--------------catggtagctcgtgcctatagt-tccggctacttagaaggc-tgaggccgaaggatcgccagatcacagcaggtcatcgctgatgtg-gaagtgaacatgccactg
i Tarsius_wallacei.k141_254427                           I 22 C 0
s Theropithecus_gelada.CM009954.1                        186432658 106 + 186847797 ggg--------------catgg-ggtgcacgcctgtaat-cccagctacttcggagac-tgaggtgggagaatcatttgaacccaagaggccaaggttgcagtgagccgagatcacaccactg
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                         15073 106 -     20410 ggg--------------catgg-ggtgcacgcctgtaat-ctcagctacttgggagac-tgaggtggaagaatcatttgaacccaagaggccaaggttgcagtgagctgagatcataccactg
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      4196 106 -     12674 ggg--------------catgg-ggtgcacgcctgtaat-ctcagctacttgggagac-tgaggtggaagaatcatttgaacccaagaggccaaggttgcagtgagctgagatcataccactg
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       15181 106 +     19930 ggg--------------catgg-ggtgcacgcctgtaat-ctcagctacttgggagac-tgaggtggaagaatcatttgaacccaagaggccaaggttgcagtgagctgagatcataccactg
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      11583 106 -     19997 ggg--------------catgg-ggtgcacgcctgtaat-ctcagctacttgggagac-tgaggtggaagaatcatttgaacccaagaggccaaggttgcagtgagctgagatcataccactg
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            51724 106 -     60166 ggg--------------catgg-ggtgcacgcctgtaat-ctcagctacttgggagac-tgaggtggaagaatcatttgaacccaagaggccaaggttgcagtgagctgagatcataccactg
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        19187 106 -     27529 ggg--------------catgg-ggtgcacgcctgtaat-ctcagctacttgggagac-tgaggtggaagaatcatttgaacccaagaggccaaggttgcagtgagctgagatcataccactg
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                        819 106 +      9229 ggg--------------catgg-ggtgcacgcctgtaat-ctcagctacttgggagac-tgaggtggaagaatcatttgaacccaagaggccaaggttgcagtgagctgagatcataccactg
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          12721 106 -     21137 ggg--------------catgg-ggtgcacgcctgtaat-ctcagctacttgggagac-tgaggtggaagaatcatttgaacccaagaggccaaggttgcagtgagctgagatcataccactg
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                     821 106 +      9131 ggg--------------catgg-ggtgcacgcctgtaat-ctcagctacttgggagac-tgaggtggaagaatcatttgaacccaagaggccaaggttgcagtgagctgagatcataccactg
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                          785 106 -      3730 ggg--------------catgg-ggtgcacgcctgtaat-ctcagctacttgggagac-tgaggtggaagaatcatttgaacccaagaggccaaggttgcagtgagatgagatcataccactg
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        29053 106 +     32220 ggg--------------catgg-ggtgcacgcctgtaat-ctcagctacttgggagac-tgaggtggaagaatcatttgaacccaagaggccaaggttgcagtgagctgagatcataccactg
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5943150 106 +   6242583 ggg--------------catgg-ggtgcacgcctgtaat-ctcagctacttgggagac-tgaggtggaagaatcatttgaacccaagaggccaaggttgcagtgagatgagatcataccactg
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       12402 106 +     20839 ggg--------------catgg-ggtgcacgcctgtaat-ctcagctacttgggagac-tgaggtggaagaatcatttgaacccaagaggccaaggttgcagtgagctgagatcataccactg
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881  13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441   0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202   0 +      8798 C
e Galago_senegalensis.k141_631886                             7400   0 +     11339 C
e Galago_moholi.ctg2040                                     429710   0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280  56 -     80660 I
e Sapajus_apella.ctg103                                    5422039  56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698  57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554  57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481  57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802  57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707  57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365  57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731  56 -      7576 I
e Saguinus_midas.LG03                                    209476296  66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403  57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771  57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323  57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639  66 +     42994 I
e Mico_schneideri.k141_916733                                        599  57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012  57 +      1399 I
e Mico_argentatus.k141_1024458                                 599  57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687  57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983  57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367  57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680  57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338  57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964   2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748  56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019  56 +     28840 I
e Cebus_albifrons.Contig27                                25654081  56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600  57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658   0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574  57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760  57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899  57 +      5377 I
e Callimico_goeldii.k141_737284                                604  57 -     31217 I
e Callibella_humilis.k141_10318                                963  57 +     27907 I
e Aotus_vociferans.k141_344750                               30359  57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235  57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626  57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199  57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201  57 -     33861 I
e Mus_pahari.LT608297.1                                   31358180   0 -  89631738 C
e Mus_spretus.CM004101.1                                  90755945   0 - 130317789 C
e Mus_musculus.chr8                                       87653455   0 - 129401213 C
e Mus_caroli.LT608237.1                                   84363955   0 - 120012414 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476  16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445   0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734   0 -     33856 C
e Perodicticus_potto.k141_1186926                              597   0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219   0 -      3244 C
e Ziphius_cavirostris.ZipCav_flattened_line_761354             719   6 -      1267 I
e Zapus_hudsonius.ZapHud_scaffold_11398                      16793   7 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Xerus_inauris.XerIna_scaffold_2302                          3257   5 +    224448 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 12841 537 -     43706 I
e Vicugna_pacos.KN270157.1                                 5374072   6 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Uropsilus_gracilis.UroGra_scaffold_12083                   55372   6 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15740414   6 +  33153633 I
e Tupaia_tana.TupTan_flattened_line_306982                    1618   5 -      4186 I
e Tupaia_chinensis.KB320699.1                              2159204   5 +   4065304 I
e Trichechus_manatus.JH594705.1                            4294941  30 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_40725                    2573  51 +     27266 I
e Tonatia_saurophila.TonSau_scaffold_294                     83151   6 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_85600                    4543   5 +     18632 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              107540   0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    389823 643 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      121344 643 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                13349   6 +     41958 I
e Symphalangus_syndactylus.tarseq_199                      1093192   0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6813808   6 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629              20670   6 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Spermophilus_dauricus.KZ294078.1                         1956222   0 -   3870691 C
e Sorex_araneus.JH798187.1                                13653119   6 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974  81 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_42075                     3130   9 -     30804 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    155296   6 -    313613 I
e Saiga_tatarica.SaiTat_scaffold_133311                       1161   6 +      9503 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                90011   6 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        368985   6 -   3329780 I
e Rattus_norvegicus.chr16                                 53573542   0 +  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  8679   6 +     55207 I
e Puma_concolor.QAVW01001104.1                            20276437   6 -  38429054 I
e Pteropus_vampyrus.KN525825.1                             1361922   6 +   4952924 I
e Pteropus_alecto.KB030862.1                              22978937   6 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Pteronotus_parnellii.KE909381.1                            16878   6 -     21811 I
e Psammomys_obesus.NESX01036370.1                            13232   0 -     21651 C
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790  14 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_173610            536   6 +      7680 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             3967   6 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159              11230   6 +     63832 I
e Petromus_typicus.PetTyp_scaffold_221660                      871   0 -      2102 C
e Peromyscus_maniculatus.KI615324.1                       18214100   8 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690  60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14679   6 -     78924 I
e Pantholops_hodgsonii.KE114653.1                          1268562   6 -   2937107 I
e Panthera_tigris.KE722367.1                               4723374   6 -   8748460 I
e Panthera_pardus.KV860321.1                                266549   6 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  153238   6 +    230217 I
e Ovis_canadensis.OviCan_scaffold_2572                      177829   6 -    191736 I
e Ovis_aries.CM001607.2                                   17589627   6 +  44047080 I
e Otocyon_megalotis.JAEUCK010005147.1                       464401 867 -    559221 I
e Oryctolagus_cuniculus.CM000791.1                        67149665 1414 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271  14 -     18566 I
e Orcinus_orca.KB316932.1                                  2784161   6 -  10937097 I
e Onychomys_torridus.OnyTor_scaffold_2986                    83355   7 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_7387                      428   9 +    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          79160 1803 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         146844   6 +    630418 I
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Octodon_degus.JH651603.1                                  749928   0 +  11899542 C
e Ochotona_princeps.JH802162.1                             1367073   5 +   3988456 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869   0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414   0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947   0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9151314 530 -   9404916 I
e Noctilio_leporinus.NocLep_scaffold_251                    759583   6 +    783361 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5868268   6 +   7148211 I
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Nannospalax_galili.KL204518.1                            3931309   0 -   9623020 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_44643                          630   6 +     25416 I
e Myotis_lucifugus.GL429869.1                              3906328   6 -   4330536 I
e Myotis_davidii.KB100139.1                                1590216   6 -   6019432 I
e Myotis_brandtii.KE162005.1                                282898   6 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     73439   0 -     80779 C
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Muscardinus_avellanarius.MusAve_scaffold_82313              6918   8 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           9149   6 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398   7 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   3323   6 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 143395   6 -    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                    29305   6 -    437263 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Miniopterus_schreibersii.MinSch_scaffold_18080             36084   6 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1852400   6 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                17806   6 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593  14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    5564   6 +     10310 I
e Mesocricetus_auratus.KB708134.1                         12184611 154 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 35599   0 +    140813 C
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Megaderma_lyra.MegLyr_scaffold_4542                        15387   6 -    207569 I
e Marmota_marmota.CZRN01000018.1                          33105375   5 -  40650429 I
e Manis_pentadactyla.KN006162.1                              53022 987 -    317179 I
e Manis_javanica.JSZB01003497.1                              20877 990 +    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_8222                 92851   6 +     94391 I
e Lycaon_pictus.CM007581.1                                17957377 535 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653  30 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             270181   6 -    662738 I
e Lepus_americanus.LepAme_scaffold_107385                     8427 743 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Lasiurus_borealis.LasBor_scaffold_32767                    18900   6 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_81059                  872   6 -     18011 I
e Jaculus_jaculus.JH725527.1                               8278673 121 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_34779                1126   6 -     31341 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7523065   0 -   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                      85084   0 +    135385 C
e Hylobates_pileatus_a.tarseq_633                            3336052   0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157   0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374   0 +     14092 C
e Hylobates_agilis.k141_232023                                2330   0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23782   0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  47158   6 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_101188               1095   6 +      9903 I
e Hipposideros_armiger.JXIK01000431.1                       112523   6 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112776   9 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337  14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20664158   0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 21876   6 +     36099 I
e Helogale_parvula.HelPar_flattened_line_2585               244410   6 +    327341 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Graphiurus_murinus.GraMur_scaffold_10447                   35448   5 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            33443   5 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     611277   6 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_108840               4751   5 -      9135 I
e Galagoides_demidoff.k141_1711393                            4689   0 +     41679 C
e Fukomys_damarensis.KN121974.1                             852512   0 +   3816255 C
e Felis_nigripes.FelNig_flattened_line_20823                 11702   6 -     36744 I
e Felis_catus_fca126.CM031415.1                           20198042   6 + 205367284 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Eubalaena_japonica.EubJap_flattened_line_31514             27295   6 -     44125 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           13349   6 +    133382 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               35993 651 +    498745 I
e Equus_caballus.CM000403.2                               18533964 651 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1286155 651 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2149194   6 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Ellobius_talpinus.LOJH01081419.1                            3254   9 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          23333   9 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       314042   6 +    607251 I
e Eidolon_helvum.AWHC01278734.1                                731   6 +      2334 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 35526   0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    38384   0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    8624 649 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  675871 642 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8632059   6 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16813920   6 +  35494412 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            69490   5 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_15900             2011   0 -     75252 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  38182   0 +     51376 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             30602   6 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_2013195               78   0 +       399 I
e Cricetulus_griseus.LT883664.1                           11668671   0 + 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_18520                 52814   0 +     63868 C
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           2481   6 +     23735 I
e Condylura_cristata.JH655891.1                           17550974  13 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1254902   0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            6469   5 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5047 647 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                       102948   0 +    143979 C
e Cavia_porcellus.DS562891.1                              18364066   0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18351806   0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     96223   6 +    217609 I
e Castor_canadensis.CasCan_scaffold_2074                    139345   5 +    179628 I
e Carollia_perspicillata.CarPer_scaffold_92756                7059   6 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                    3253   0 -     12242 C
e Capra_hircus.CM004588.1                                 18064388   6 -  44709034 I
e Capra_aegagrus.CM003241.1                               18833571   6 +  46296322 I
e Canis_lupus_orion.HG994398.1                            18502439 535 +  63665305 I
e Canis_lupus_familiaris.chr16                            17961137 535 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9036666 537 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     1966 535 -     43241 I
e CanFam4.chr16                                           17801223 537 -  60362399 I
e Camelus_ferus.KB017975.1                                  405326   6 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2337028   6 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10004556   6 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2823099   6 +   4408762 I
e Bos_taurus.CM000203.6                                   18087146   6 +  45695690 I
e Bos_mutus.JH880303.1                                     1129062   6 -   1948126 I
e Bos_indicus.CM003047.1                                  20276508   6 +  48749331 I
e Bison_bison.KN261452.1                                    203269   6 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    30657   6 +     34529 I
e Balaenoptera_bonaerensis.DF707048.1                         4502   6 -     18090 I
e Balaenoptera_acutorostrata.KI537508.1                   15194037   6 +  23207421 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6715   6 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         538   0 +      5281 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      14769   5 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_43303               840   6 -     32520 I
e Anoura_caudifer.AnoCau_scaffold_1412                      187308   3 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          679561   6 -   2318259 I
e Allactaga_bullata.AllBul_scaffold_9566                     75924 121 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T
e Acomys_cahirinus.AcoCah_scaffold_12655                     73571   0 +     87051 C
e Acinonyx_jubatus.LLWD01001279.1                           829423   6 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      11015 15 +     62944 ccctccagcct-ggcc
s Allenopithecus_nigroviridis.k141_3361533                   18885 15 -     52922 cccttcagcct-ggcc
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         18822 15 -     28001 cccttcagcct-ggcc
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          9317 15 -     18505 cccttcagcct-ggcc
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                          10170 15 -     12518 cccttcagcct-ggcc
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             10526 13 +     51355 cattccagcct-gg--
i Alouatta_belzebul.k141_3560514                         I 37 I 2
s Alouatta_caraya.k141_1701091                                3633 13 -     36483 cattccagcct-gg--
i Alouatta_caraya.k141_1701091                           I 37 I 2
s Alouatta_discolor.k141_566626                              14086 13 +     28687 cattccagcct-gg--
i Alouatta_discolor.k141_566626                          I 37 I 2
s Alouatta_juara.k141_1302312                                 2558 13 +     27940 cattccagcct-gg--
i Alouatta_juara.k141_1302312                            I 37 I 2
s Alouatta_macconnelli.k141_918386                            3646 13 -      9457 cattccagcct-gg--
i Alouatta_macconnelli.k141_918386                       I 37 I 2
s Alouatta_nigerrima.k141_1929159                             2604 13 +     30492 cattccagcct-gg--
i Alouatta_nigerrima.k141_1929159                        I 37 I 2
s Alouatta_palliata.k141_2135620                              6821 13 +     47717 cattccagcct-gg--
i Alouatta_palliata.k141_2135620                         I 37 I 2
s Alouatta_puruensis.k141_362188                              3326 13 +      5663 cattccagcct-gg--
i Alouatta_puruensis.k141_362188                         I 37 I 2
s Alouatta_seniculus.k141_117119                             17777 13 +     50774 cattccagcct-gg--
i Alouatta_seniculus.k141_117119                         I 37 I 2
s Ateles_geoffroyi_b.tarseq_1536                             21211020 13 -  21539123 cattccagcct-gg--
i Ateles_geoffroyi_b.tarseq_1536                            I 37 I 1
s Ateles_belzebuth.k141_445860                               45818 13 -     48001 cattccagcct-gg--
i Ateles_belzebuth.k141_445860                           I 37 I 2
s Ateles_chamek.k141_1806455                                 28619 13 -     30947 cattccagcct-gg--
i Ateles_chamek.k141_1806455                             I 37 I 2
s Ateles_geoffroyi_a.k141_833924                               10394 13 -     89868 cattccagcct-gg--
i Ateles_geoffroyi_a.k141_833924                           I 37 I 2
s Ateles_marginatus.k141_803263                              14776 13 -     40414 cattccagcct-gg--
i Ateles_marginatus.k141_803263                          I 37 I 2
s Ateles_paniscus.k141_457735                                22664 13 +     72325 cattccagcct-gg--
i Ateles_paniscus.k141_457735                            I 37 I 2
s Cacajao_ayresi.k141_552049                                103638 13 -    122966 cattccagcct-gg--
i Cacajao_ayresi.k141_552049                             I 37 I 1
s Cacajao_calvus.k141_5142                                   63141 13 +     81800 cattccagcct-gg--
i Cacajao_calvus.k141_5142                               I 37 I 1
s Cacajao_hosomi.k141_81245                                  32323 13 -     95584 cattccagcct-gg--
i Cacajao_hosomi.k141_81245                              I 37 I 1
s Cacajao_melanocephalus.k141_619699                         56424 13 -    119600 cattccagcct-gg--
i Cacajao_melanocephalus.k141_619699                     I 37 I 1
s Carlito_syrichta.NW_007259797.1                           157697 14 -    496798 cacatt-gcct-gggc
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         7194 14 +     31688 cacatt-gcct-gggc
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4479838 15 +   4669795 cccttcagcct-ggcc
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        4337 15 +     17872 cccttcagcct-ggcc
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4927 15 -     14043 cccttcagcct-ggcc
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          13025 15 +     27781 cccttcagcct-ggcc
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        13182 15 -     20310 cccttcagcct-ggcc
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          16158 15 +     29689 cccttcagcct-ggcc
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10918 15 -     20078 cccttcagcct-ggcc
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          18829 15 -     27936 cccttcaacct-ggcc
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            7704 15 -     17152 cccttcagcct-ggcc
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38827428 15 +  39242232 cccttcagcct-ggcc
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226936 15 -  21565898 cccttcagcct-ggcc
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       44055 15 -     53127 cccttcagcct-ggcc
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        4305 15 +     13442 cccttcagcct-ggcc
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       18851 15 -     27947 cccttcagcct-ggcc
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1876 15 +     10558 cccttcagcct-ggcc
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4885 15 +     14005 cccttcagcct-ggcc
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               2243 13 -     17098 cattccagcct-gg--
i Cheracebus_lucifer.k141_49986                          I 37 I 2
s Cheracebus_lugens.k141_1393925                              2119 13 +     17877 cattccagcct-gg--
i Cheracebus_lugens.k141_1393925                         I 37 I 2
s Cheracebus_regulus.k141_471822                            159686 13 -    216457 cattccagcct-gg--
i Cheracebus_regulus.k141_471822                         I 37 I 2
s Cheracebus_torquatus.k141_1170026                          64155 13 +     76511 cattccagcct-gg--
i Cheracebus_torquatus.k141_1170026                      I 37 I 2
s Chiropotes_israelita.k141_747660                          100767 13 +    146308 cattccagcct-gg--
i Chiropotes_israelita.k141_747660                       I 37 I 1
s Chiropotes_sagulatus.k141_1421488                          32574 13 -     50570 cattccagcct-gg--
i Chiropotes_sagulatus.k141_1421488                      I 37 I 1
s Chlorocebus_aethiops.ctg25                              18432755 15 -  18827391 cccttcagcct-ggcc
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       19252 15 -     50209 cccttcagcct-ggcc
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135426256 15 + 135778131 cccttcagcct-ggcc
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1914757 15 +   2368649 ccctccagcct-ggcc
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199953005 15 + 200372422 ccctccagcct-ggcc
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              41278 15 +     84244 ccctccagcct-ggcc
i Colobus_polykomos.k141_906115                          C 0 C 0
s Erythrocebus_patas.Contig38                             21209427 15 -  21539334 cccttcagcct-ggcc
i Erythrocebus_patas.Contig38                            C 0 C 0
s Gorilla_beringei.k141_3596273                              20260 15 -     32273 ccctccagcct-ggcc
i Gorilla_beringei.k141_3596273                          I 105 I 24
s Gorilla_gorilla.LT578341.1                             186342396 15 + 186649187 ccctccagcct-ggcc
i Gorilla_gorilla.LT578341.1                             C 0 I 24
s Hoolock_leuconedys.ctg274                                    439058 15 +    630532 ccctccagcct-ggcc
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         16821 14 -     38430 cattccagcctggg--
i Lagothrix_lagothricha.k141_1005387                     I 37 I 1
s Lophocebus_aterrimus.ctg367                              1441383 15 +   1826925 ccctttagcct-ggcc
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                              11195 15 +     40492 cccttcaccct-ggcc
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59680449 15 +  60120075 cccttcagcct-ggcc
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16966 15 -     26193 cccttcaccct-ggcc
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            84742 15 -    114318 cccttcaccct-ggcc
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 10433 15 -     23192 cccttcaccct-ggcc
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19897 15 -     29190 cccttcaccct-ggcc
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  28475 15 +     37952 cccttcaccct-ggcc
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186843552 15 + 187317192 cccttcaccct-ggcc
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25462130 15 -  25927173 cccttcaCCCT-GGCC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  84331 15 +     89720 cccttcaccct-ggcc
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                11324 15 +     20474 cccttcagcct-ggcc
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  11121 15 -     14993 cccttcaccct-ggcc
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333983 15 -    668171 cccttcaccct-ggcc
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 9433 15 -     24072 cccttcaccct-ggcc
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               30064 15 -     45290 cccttcaccct-ggcc
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23941652 15 -  24302211 cccttcagcct-ggcc
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355767 15 +    752769 cccttcagcct-ggcc
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Miopithecus_ogouensis.k141_534055                          13333 15 -     28506 cccttcagcct-ggcc
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Nasalis_larvatus.k141_413338                               19383 15 +     21681 ccctccagcct-ggcc
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Pan_paniscus.KQ411613.1                                    48361 15 +     80009 ccctccagcct-ggcc
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189147214 15 + 189151597 ccctccagcct-ggcc
i Pan_troglodytes.CM009242.2                             I 102 I 56
s Papio_anubis.CM001495.2                                183447456 15 + 183742232 cccttcagcct-ggcc
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            11106 15 +     20448 cccttcagcct-ggcc
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567914 15 +  20919399 cccttcagcct-ggcc
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   9860 15 +     41871 cccttcagcct-ggcc
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    13139 15 +     27711 cccttcagcct-ggcc
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  4138 15 -     11374 cccttcagcct-ggcc
i Papio_ursinus.k141_5274964                             C 0 C 0
s Piliocolobus_badius.k141_1142974                            2461 15 +     68526 ccctccagcct-ggcc
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        42606 12 +     89929 ccctccagcct-g---
i Piliocolobus_gordonorum.k141_381342                    C 0 I 1
s Piliocolobus_kirkii.k141_448987                            44020 12 +     51399 ccctccagcct-g---
i Piliocolobus_kirkii.k141_448987                        C 0 I 1
s Piliocolobus_tephrosceles.PDMG02000141.1                14300257 12 -  14605196 ccctccagcct-g---
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 1
s Pithecia_albicans.k141_1476471                              6038 13 +     26961 cattccagcct-gg--
i Pithecia_albicans.k141_1476471                         I 37 I 1
s Pithecia_chrysocephala.k141_839575                          2166 13 +     23417 cattccagcct-gg--
i Pithecia_chrysocephala.k141_839575                     I 37 I 1
s Pithecia_hirsuta.k141_305604                                6030 13 +     29694 cattccagcct-gg--
i Pithecia_hirsuta.k141_305604                           I 37 I 1
s Pithecia_mittermeieri.k141_446740                          31056 13 +     52772 cattccagcct-gg--
i Pithecia_mittermeieri.k141_446740                      I 37 I 1
s Pithecia_pissinattii.k141_1824269                           6052 13 +     26198 cattccagcct-gg--
i Pithecia_pissinattii.k141_1824269                      I 37 I 1
s Pithecia_pithecia.tarseq_165                             3942583 13 +   4542175 cattccagcct-gg--
i Pithecia_pithecia.tarseq_165                           I 37 I 1
s Pithecia_vanzolinii.k141_1697688                            6016 13 -     23490 cattccagcct-gg--
i Pithecia_vanzolinii.k141_1697688                       I 37 I 1
s Plecturocebus_bernhardi.k141_2549090                       10276 13 -     39866 cattccagcct-gg--
i Plecturocebus_bernhardi.k141_2549090                   I 37 I 2
s Plecturocebus_brunneus.k141_1495506                        19440 13 +     34906 cattccagcct-gg--
i Plecturocebus_brunneus.k141_1495506                    I 37 I 2
s Plecturocebus_caligatus.k141_1382851                       23702 13 +     87950 cattccagcct-gg--
i Plecturocebus_caligatus.k141_1382851                   I 37 I 2
s Plecturocebus_cinerascens.k141_1164729                     24532 13 +     88961 cattccagcct-gg--
i Plecturocebus_cinerascens.k141_1164729                 I 37 I 2
s Plecturocebus_cupreus.k141_2351393                         10199 13 +     39403 cattccagcct-gg--
i Plecturocebus_cupreus.k141_2351393                     I 37 I 2
s Plecturocebus_dubius.k141_1058799                          23982 13 -     87928 cattccagcct-gg--
i Plecturocebus_dubius.k141_1058799                      I 37 I 2
s Plecturocebus_grovesi.k141_2013005                         30943 13 +     60166 cattccagcct-gg--
i Plecturocebus_grovesi.k141_2013005                     I 37 I 2
s Plecturocebus_hoffmannsi.k141_3303950                      31139 13 +     67232 cattccagcct-gg--
i Plecturocebus_hoffmannsi.k141_3303950                  I 37 I 2
s Plecturocebus_miltoni.k141_349282                          26612 13 +     90634 cattccagcct-gg--
i Plecturocebus_miltoni.k141_349282                      I 37 I 2
s Plecturocebus_moloch.k141_1031110                          23985 13 -     89403 cattccagcct-gg--
i Plecturocebus_moloch.k141_1031110                      I 37 I 2
s Pongo_abelii.CM009266.2                                189135372 15 + 189387572 ccctccagcct-ggac
i Pongo_abelii.CM009266.2                                C 0 I 33
s Pongo_pygmaeus.ctg66                                     9574982 15 +   9816681 ccctccagcct-ggac
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               77560 15 -     81375 ccctccagcct-ggcc
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              9391 15 +     19060 ccctccagcct-ggcc
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Pygathrix_cinerea.k141_1153803                             19370 15 -     91421 ccctccagcct-ggcc
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7613493 15 +   7812017 ccctccagcct-ggcc
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             19400 15 -     72585 ccctccagcct-ggcc
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                            11067 15 -     11128 ccctccagcct-ggcc
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91240433 15 - 195417433 ccctccagcct-ggcc
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7676082 15 +   7961872 ccctccagcct-ggcc
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Semnopithecus_entellus.k141_1672505                         4241 15 -     12572 ccctccagcct-ggcc
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      31093 15 +     39453 ccctccagcct-ggcc
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           11597 15 +     27826 ccctccagcct-ggcc
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            11142 15 -     19483 ccctccagcct-ggcc
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      4440 15 -     12762 ccctccagcct-ggcc
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           4285 15 +     13763 ccctccagcct-ggcc
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Tarsius_lariang.k141_2201908                               28193 14 +     70052 cacatt-gcct-gggc
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                2990 14 -     16117 cacatt-gcct-gggc
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186432764 15 + 186847797 cccttcagcct-ggcc
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                         15179 15 -     20410 ccctccagcct-ggcc
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      4302 15 -     12674 ccctccagcct-ggcc
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       15287 15 +     19930 ccctccagcct-ggcc
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      11689 15 -     19997 ccctccagcct-ggcc
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            51830 15 -     60166 ccctccagcct-ggcc
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        19293 15 -     27529 ccctccagcct-ggcc
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                        925 15 +      9229 ccctccagcct-ggcc
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          12827 15 -     21137 ccctccagcct-ggcc
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                     927 15 +      9131 ccctccagcct-ggcc
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                          891 15 -      3730 ccctccagcct-ggcc
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        29159 15 +     32220 ccctccagcct-ggcc
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5943256 15 +   6242583 ccctccagcct-ggcc
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       12508 15 +     20839 ccctccagcct-ggcc
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Mus_pahari.LT608297.1                                   31358180  0 -  89631738 C
e Mus_spretus.CM004101.1                                  90755945  0 - 130317789 C
e Mus_musculus.chr8                                       87653455  0 - 129401213 C
e Mus_caroli.LT608237.1                                   84363955  0 - 120012414 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Ziphius_cavirostris.ZipCav_flattened_line_761354             719  6 -      1267 I
e Zapus_hudsonius.ZapHud_scaffold_11398                      16793  7 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Xerus_inauris.XerIna_scaffold_2302                          3257  5 +    224448 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 12841 537 -     43706 I
e Vicugna_pacos.KN270157.1                                 5374072  6 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Uropsilus_gracilis.UroGra_scaffold_12083                   55372  6 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15740414  6 +  33153633 I
e Tupaia_tana.TupTan_flattened_line_306982                    1618  5 -      4186 I
e Tupaia_chinensis.KB320699.1                              2159204  5 +   4065304 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_40725                    2573 51 +     27266 I
e Tonatia_saurophila.TonSau_scaffold_294                     83151  6 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_85600                    4543  5 +     18632 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              107540  0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    389823 643 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      121344 643 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                13349  6 +     41958 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6813808  6 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629              20670  6 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Spermophilus_dauricus.KZ294078.1                         1956222  0 -   3870691 C
e Sorex_araneus.JH798187.1                                13653119  6 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_42075                     3130  9 -     30804 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    155296  6 -    313613 I
e Saiga_tatarica.SaiTat_scaffold_133311                       1161  6 +      9503 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                90011  6 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        368985  6 -   3329780 I
e Rattus_norvegicus.chr16                                 53573542  0 +  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  8679  6 +     55207 I
e Puma_concolor.QAVW01001104.1                            20276437  6 -  38429054 I
e Pteropus_vampyrus.KN525825.1                             1361922  6 +   4952924 I
e Pteropus_alecto.KB030862.1                              22978937  6 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Pteronotus_parnellii.KE909381.1                            16878  6 -     21811 I
e Psammomys_obesus.NESX01036370.1                            13232  0 -     21651 C
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_173610            536  6 +      7680 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             3967  6 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159              11230  6 +     63832 I
e Petromus_typicus.PetTyp_scaffold_221660                      871  0 -      2102 C
e Peromyscus_maniculatus.KI615324.1                       18214100  8 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14679  6 -     78924 I
e Pantholops_hodgsonii.KE114653.1                          1268562  6 -   2937107 I
e Panthera_tigris.KE722367.1                               4723374  6 -   8748460 I
e Panthera_pardus.KV860321.1                                266549  6 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  153238  6 +    230217 I
e Ovis_canadensis.OviCan_scaffold_2572                      177829  6 -    191736 I
e Ovis_aries.CM001607.2                                   17589627  6 +  44047080 I
e Otocyon_megalotis.JAEUCK010005147.1                       464401 867 -    559221 I
e Oryctolagus_cuniculus.CM000791.1                        67149665 1414 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Orcinus_orca.KB316932.1                                  2784161  6 -  10937097 I
e Onychomys_torridus.OnyTor_scaffold_2986                    83355  7 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_7387                      428  9 +    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          79160 1803 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         146844  6 +    630418 I
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Octodon_degus.JH651603.1                                  749928  0 +  11899542 C
e Ochotona_princeps.JH802162.1                             1367073  5 +   3988456 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9151314 530 -   9404916 I
e Noctilio_leporinus.NocLep_scaffold_251                    759583  6 +    783361 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5868268  6 +   7148211 I
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Nannospalax_galili.KL204518.1                            3931309  0 -   9623020 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_44643                          630  6 +     25416 I
e Myotis_lucifugus.GL429869.1                              3906328  6 -   4330536 I
e Myotis_davidii.KB100139.1                                1590216  6 -   6019432 I
e Myotis_brandtii.KE162005.1                                282898  6 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     73439  0 -     80779 C
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Muscardinus_avellanarius.MusAve_scaffold_82313              6918  8 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           9149  6 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   3323  6 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 143395  6 -    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                    29305  6 -    437263 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Miniopterus_schreibersii.MinSch_scaffold_18080             36084  6 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1852400  6 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                17806  6 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    5564  6 +     10310 I
e Mesocricetus_auratus.KB708134.1                         12184611 154 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 35599  0 +    140813 C
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Megaderma_lyra.MegLyr_scaffold_4542                        15387  6 -    207569 I
e Marmota_marmota.CZRN01000018.1                          33105375  5 -  40650429 I
e Manis_pentadactyla.KN006162.1                              53022 987 -    317179 I
e Manis_javanica.JSZB01003497.1                              20877 990 +    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_8222                 92851  6 +     94391 I
e Lycaon_pictus.CM007581.1                                17957377 535 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             270181  6 -    662738 I
e Lepus_americanus.LepAme_scaffold_107385                     8427 743 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Lasiurus_borealis.LasBor_scaffold_32767                    18900  6 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_81059                  872  6 -     18011 I
e Jaculus_jaculus.JH725527.1                               8278673 121 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_34779                1126  6 -     31341 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7523065  0 -   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                      85084  0 +    135385 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23782  0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  47158  6 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_101188               1095  6 +      9903 I
e Hipposideros_armiger.JXIK01000431.1                       112523  6 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112776  9 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20664158  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 21876  6 +     36099 I
e Helogale_parvula.HelPar_flattened_line_2585               244410  6 +    327341 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Graphiurus_murinus.GraMur_scaffold_10447                   35448  5 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            33443  5 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     611277  6 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_108840               4751  5 -      9135 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Fukomys_damarensis.KN121974.1                             852512  0 +   3816255 C
e Felis_nigripes.FelNig_flattened_line_20823                 11702  6 -     36744 I
e Felis_catus_fca126.CM031415.1                           20198042  6 + 205367284 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Eubalaena_japonica.EubJap_flattened_line_31514             27295  6 -     44125 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           13349  6 +    133382 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               35993 651 +    498745 I
e Equus_caballus.CM000403.2                               18533964 651 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1286155 651 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2149194  6 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Ellobius_talpinus.LOJH01081419.1                            3254  9 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          23333  9 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       314042  6 +    607251 I
e Eidolon_helvum.AWHC01278734.1                                731  6 +      2334 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 35526  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    38384  0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    8624 649 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  675871 642 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8632059  6 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16813920  6 +  35494412 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            69490  5 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_15900             2011  0 -     75252 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  38182  0 +     51376 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             30602  6 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_2013195               78  0 +       399 I
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_18520                 52814  0 +     63868 C
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           2481  6 +     23735 I
e Condylura_cristata.JH655891.1                           17550974 13 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1254902  0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            6469  5 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5047 647 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                       102948  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18364066  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18351806  0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     96223  6 +    217609 I
e Castor_canadensis.CasCan_scaffold_2074                    139345  5 +    179628 I
e Carollia_perspicillata.CarPer_scaffold_92756                7059  6 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                    3253  0 -     12242 C
e Capra_hircus.CM004588.1                                 18064388  6 -  44709034 I
e Capra_aegagrus.CM003241.1                               18833571  6 +  46296322 I
e Canis_lupus_orion.HG994398.1                            18502439 535 +  63665305 I
e Canis_lupus_familiaris.chr16                            17961137 535 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9036666 537 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     1966 535 -     43241 I
e CanFam4.chr16                                           17801223 537 -  60362399 I
e Camelus_ferus.KB017975.1                                  405326  6 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2337028  6 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10004556  6 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2823099  6 +   4408762 I
e Bos_taurus.CM000203.6                                   18087146  6 +  45695690 I
e Bos_mutus.JH880303.1                                     1129062  6 -   1948126 I
e Bos_indicus.CM003047.1                                  20276508  6 +  48749331 I
e Bison_bison.KN261452.1                                    203269  6 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    30657  6 +     34529 I
e Balaenoptera_bonaerensis.DF707048.1                         4502  6 -     18090 I
e Balaenoptera_acutorostrata.KI537508.1                   15194037  6 +  23207421 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6715  6 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      14769  5 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_43303               840  6 -     32520 I
e Anoura_caudifer.AnoCau_scaffold_1412                      187308  3 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          679561  6 -   2318259 I
e Allactaga_bullata.AllBul_scaffold_9566                     75924 121 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T
e Acomys_cahirinus.AcoCah_scaffold_12655                     73571  0 +     87051 C
e Acinonyx_jubatus.LLWD01001279.1                           829423  6 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      11030 44 +     62944 aa-cagagt-gaggattcatctctctctctctctctc--------------tctCTC---------TA-T
s Allenopithecus_nigroviridis.k141_3361533                   18900 23 -     52922 aa-cagaCTTAAGAATTCA----------------------------------TCA-----------A-A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         18837 22 -     28001 aa-cagact-aagaattca----------------------------------tcA-----------A-A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          9332 22 -     18505 aa-cagact-aagaattca----------------------------------tcA-----------A-A
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                          10185 22 -     12518 aa-cagact-aagaattca----------------------------------tcA-----------A-A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             10541 22 +     51355 ga-cagagt-gagaattca----------------------------------tct-----------c-a
i Alouatta_belzebul.k141_3560514                         I 2 I 1
s Alouatta_caraya.k141_1701091                                3648 22 -     36483 ga-cagagt-gagaattca----------------------------------tct-----------c-a
i Alouatta_caraya.k141_1701091                           I 2 I 1
s Alouatta_discolor.k141_566626                              14101 22 +     28687 ga-cagagt-gagaattca----------------------------------tct-----------c-a
i Alouatta_discolor.k141_566626                          I 2 I 1
s Alouatta_juara.k141_1302312                                 2573 22 +     27940 ga-cagagt-gagaattca----------------------------------tct-----------c-a
i Alouatta_juara.k141_1302312                            I 2 I 1
s Alouatta_macconnelli.k141_918386                            3661 22 -      9457 ga-cagagt-gagaattca----------------------------------tct-----------c-a
i Alouatta_macconnelli.k141_918386                       I 2 I 1
s Alouatta_nigerrima.k141_1929159                             2619 22 +     30492 ga-cagagt-gagaattca----------------------------------tct-----------c-a
i Alouatta_nigerrima.k141_1929159                        I 2 I 1
s Alouatta_palliata.k141_2135620                              6836 22 +     47717 ga-cagagt-gagaattca----------------------------------tct-----------c-a
i Alouatta_palliata.k141_2135620                         I 2 I 1
s Alouatta_puruensis.k141_362188                              3341 22 +      5663 ga-cagagt-gagaattca----------------------------------tct-----------c-a
i Alouatta_puruensis.k141_362188                         I 2 I 1
s Alouatta_seniculus.k141_117119                             17792 22 +     50774 ga-cagagt-gagaattca----------------------------------tct-----------c-a
i Alouatta_seniculus.k141_117119                         I 2 I 1
s Ateles_geoffroyi_b.tarseq_1536                             21211034 22 -  21539123 ga-cagagt-gagaattca----------------------------------tct-----------a-a
i Ateles_geoffroyi_b.tarseq_1536                            I 1 I 1
s Ateles_belzebuth.k141_445860                               45833 22 -     48001 ga-cagagt-gagaattca----------------------------------tct-----------a-a
i Ateles_belzebuth.k141_445860                           I 2 I 1
s Ateles_chamek.k141_1806455                                 28634 22 -     30947 ga-cagagt-gagaattca----------------------------------tct-----------a-a
i Ateles_chamek.k141_1806455                             I 2 I 1
s Ateles_geoffroyi_a.k141_833924                               10409 22 -     89868 ga-cagagt-gagaattca----------------------------------tct-----------a-a
i Ateles_geoffroyi_a.k141_833924                           I 2 I 1
s Ateles_marginatus.k141_803263                              14791 22 -     40414 ga-cagagt-gagaattca----------------------------------tct-----------a-a
i Ateles_marginatus.k141_803263                          I 2 I 1
s Ateles_paniscus.k141_457735                                22679 22 +     72325 ga-cagagt-gagaattca----------------------------------tct-----------a-a
i Ateles_paniscus.k141_457735                            I 2 I 1
s Cacajao_ayresi.k141_552049                                103652 22 -    122966 ga-cagagt-gagagttca----------------------------------tct-----------a-a
i Cacajao_ayresi.k141_552049                             I 1 C 0
s Cacajao_calvus.k141_5142                                   63155 22 +     81800 ga-cagagt-gagagttca----------------------------------tct-----------a-a
i Cacajao_calvus.k141_5142                               I 1 C 0
s Cacajao_hosomi.k141_81245                                  32337 22 -     95584 ga-cagagt-gagagttca----------------------------------tct-----------a-a
i Cacajao_hosomi.k141_81245                              I 1 C 0
s Cacajao_melanocephalus.k141_619699                         56438 22 -    119600 ga-cagagt-gagagttca----------------------------------tct-----------a-a
i Cacajao_melanocephalus.k141_619699                     I 1 C 0
s Carlito_syrichta.NW_007259797.1                           157711 22 -    496798 aa-tggagt-gagactcca----------------------------------act-----------c-a
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         7208 22 +     31688 aa-tggagt-gagactcca----------------------------------act-----------c-a
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4479853 22 +   4669795 aa-cagact-aagaattca----------------------------------tca-----------a-a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        4352 22 +     17872 aa-cagact-aagaattca----------------------------------tcA-----------A-A
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4942 22 -     14043 aa-cagact-aagaattca----------------------------------tcA-----------A-A
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          13040 22 +     27781 aa-cagact-aagaattca----------------------------------tcA-----------A-A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        13197 22 -     20310 aa-cagact-aagaattca----------------------------------tcA-----------A-A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          16173 22 +     29689 aa-cagaCT-AAGAATTCA----------------------------------TTA-----------A-A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10933 22 -     20078 aa-cagact-aagaattca----------------------------------tcA-----------A-A
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          18844 22 -     27936 aa-cagact-aagaattca----------------------------------tcA-----------A-A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            7719 22 -     17152 aa-cagact-aagaattca----------------------------------tcA-----------A-A
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38827443 22 +  39242232 aa-cagact-aagaattca----------------------------------tcA-----------A-A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226951 22 -  21565898 aa-cagact-aagaattca----------------------------------tcA-----------A-A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       44070 22 -     53127 aa-cagact-aagaattca----------------------------------tcA-----------A-A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        4320 22 +     13442 aa-cagact-aagaattca----------------------------------tct-----------A-T
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       18866 22 -     27947 aa-cagact-aagaattca----------------------------------tcA-----------A-A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1891 22 +     10558 aa-cagaCA-AAGAATTCA----------------------------------TCA-----------A-A
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4900 22 +     14005 aa-cagact-aagaattca----------------------------------tcA-----------A-A
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               2258 22 -     17098 aa-cacagt-gagagttca----------------------------------tct-----------a-a
i Cheracebus_lucifer.k141_49986                          I 2 C 0
s Cheracebus_lugens.k141_1393925                              2134 22 +     17877 aa-cacagt-gagagttca----------------------------------tct-----------a-a
i Cheracebus_lugens.k141_1393925                         I 2 C 0
s Cheracebus_regulus.k141_471822                            159701 22 -    216457 aa-cacagt-gagtgttca----------------------------------tct-----------a-a
i Cheracebus_regulus.k141_471822                         I 2 C 0
s Cheracebus_torquatus.k141_1170026                          64170 22 +     76511 aa-cacagt-gagagttca----------------------------------tct-----------a-a
i Cheracebus_torquatus.k141_1170026                      I 2 C 0
s Chiropotes_israelita.k141_747660                          100781 22 +    146308 ga-cagagt-gagagttca----------------------------------tct-----------a-a
i Chiropotes_israelita.k141_747660                       I 1 C 0
s Chiropotes_sagulatus.k141_1421488                          32588 22 -     50570 ga-cagagt-gagagttca----------------------------------tct-----------a-a
i Chiropotes_sagulatus.k141_1421488                      I 1 C 0
s Chlorocebus_aethiops.ctg25                              18432770 22 -  18827391 aa-cagact-aagaattca----------------------------------tcA-----------A-A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       19267 22 -     50209 aa-cagact-aagaattca----------------------------------tcA-----------A-A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135426271 22 + 135778131 aa-cagact-aagaattca----------------------------------tca-----------a-a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1914772 22 +   2368649 ga-cagact-aagaatcca----------------------------------taa-----------a-a
i Colobus_angolensis.KN981557.1                          C 0 I 19
s Colobus_guereza.LG01                                   199953020 22 + 200372422 ga-cagact-aagaatcca----------------------------------taa-----------a-a
i Colobus_guereza.LG01                                   C 0 I 19
s Colobus_polykomos.k141_906115                              41293 22 +     84244 ga-cagact-aagaatcca----------------------------------taa-----------a-a
i Colobus_polykomos.k141_906115                          C 0 I 21
s Erythrocebus_patas.Contig38                             21209442 22 -  21539334 aa-cagact-aagaattca----------------------------------tcA-----------A-A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Gorilla_beringei.k141_2066350                                435 24 +      1742 aa-cagagt-gaggattca----------------------------------tctc---------aa-a
i Gorilla_beringei.k141_2066350                          I 15 I 9
s Gorilla_gorilla.CYUI03001204.1                             17865 24 -     63219 aa-cagagt-gaggattca----------------------------------tctc---------aa-a
i Gorilla_gorilla.CYUI03001204.1                         I 487 I 7
s Hoolock_leuconedys.ctg274                                    439073 24 +    630532 ga-gagagt-gagaattca----------------------------------tctc---------aa-a
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         16836 22 -     38430 aa-cagagt-gagaattca----------------------------------tct-----------a-a
i Lagothrix_lagothricha.k141_1005387                     I 1 I 1
s Lophocebus_aterrimus.ctg367                              1441398 22 +   1826925 aa-cagact-aagaattca----------------------------------tcA-----------A-A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                              11210 22 +     40492 aa-cagact-aagaattca----------------------------------tcA-----------A-A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59680464 22 +  60120075 aa-cagact-aagaattca----------------------------------tcA-----------A-A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 16981 22 -     26193 aa-cagact-aagaattca----------------------------------tcA-----------A-A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            84757 22 -    114318 aa-cagact-aagaattca----------------------------------tcA-----------A-A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 10448 22 -     23192 aa-cagact-aagaattca----------------------------------tcA-----------A-A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19912 22 -     29190 aa-cagact-aagaattca----------------------------------tcA-----------A-A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  28490 22 +     37952 aa-cagact-aagaattca----------------------------------tcA-----------A-A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186843567 22 + 187317192 aa-cagact-aagaattca----------------------------------tca-----------a-a
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25462145 22 -  25927173 AA-CAGACT-AAGAattca----------------------------------tca-----------a-a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  84346 22 +     89720 aa-cagact-aagaattca----------------------------------tcA-----------A-A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                11339 22 +     20474 aa-cagact-aagaattca----------------------------------tct-----------A-T
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  11136 22 -     14993 aa-cagact-aagaattca----------------------------------tcA-----------A-A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  333998 22 -    668171 aa-cagact-aagaattca----------------------------------tcA-----------A-A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 9448 22 -     24072 aa-cagact-aagaattca----------------------------------tcA-----------A-A
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               30079 22 -     45290 aa-cagact-aagaattca----------------------------------tcA-----------A-A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23941667 22 -  24302211 aa-cagact-aagaattca----------------------------------tcA-----------A-A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355782 22 +    752769 aa-cagact-aagaattca----------------------------------tcA-----------A-A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Miopithecus_ogouensis.k141_534055                          13348 22 -     28506 aa-cagact-aagaattca----------------------------------tcA-----------A-T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Nasalis_larvatus.k141_413338                               19398 18 +     21681 ga-cagaCT-AAGAATTCA----------------------------------T----------------
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Pan_paniscus.KQ411613.1                                    48376 35 +     80009 aa-cagagt-gaggattcatctctctctctctctctc---------------------------------
i Pan_paniscus.KQ411613.1                                C 0 I 14
s Pan_troglodytes.NBAG03001836.1                             34286 58 +     51860 aa-cagagt-gaggattcatctctctctctctctctctctctctctctctctctctc---------tc-t
i Pan_troglodytes.NBAG03001836.1                         I 122 I 9
s Papio_anubis.CM001495.2                                183447471 22 + 183742232 aa-cagact-aagaattca----------------------------------tca-----------a-a
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            11121 22 +     20448 aa-cagact-aagaattca----------------------------------tcA-----------A-A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567929 22 +  20919399 aa-cagact-aagaattca----------------------------------tca-----------a-a
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   9875 22 +     41871 aa-cagact-aagaattca----------------------------------tcA-----------A-A
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    13154 22 +     27711 aa-cagact-aagaattca----------------------------------tcA-----------A-A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  4153 22 -     11374 aa-cagact-aagaattca----------------------------------tcA-----------A-A
i Papio_ursinus.k141_5274964                             C 0 C 0
s Piliocolobus_badius.k141_1142974                            2476 22 +     68526 ga-cagact-aagaatcca----------------------------------taa-----------a-a
i Piliocolobus_badius.k141_1142974                       C 0 I 24
s Piliocolobus_gordonorum.k141_381342                        42619 22 +     89929 ga-cagact-aagaatcca----------------------------------taa-----------a-a
i Piliocolobus_gordonorum.k141_381342                    I 1 I 22
s Piliocolobus_kirkii.k141_448987                            44033 22 +     51399 ga-cagact-aagaatcca----------------------------------taa-----------a-a
i Piliocolobus_kirkii.k141_448987                        I 1 I 24
s Piliocolobus_tephrosceles.PDMG02000141.1                14300270 22 -  14605196 ga-CAGACT-AAgaatcca----------------------------------taa-----------a-a
i Piliocolobus_tephrosceles.PDMG02000141.1               I 1 I 24
s Pithecia_albicans.k141_1476471                              6052 22 +     26961 ga-cagagt-gaaagttca----------------------------------tct-----------a-a
i Pithecia_albicans.k141_1476471                         I 1 C 0
s Pithecia_chrysocephala.k141_839575                          2180 22 +     23417 ga-cagagt-gagagttca----------------------------------tct-----------a-a
i Pithecia_chrysocephala.k141_839575                     I 1 C 0
s Pithecia_hirsuta.k141_305604                                6044 22 +     29694 ga-cagagt-gaaagttca----------------------------------tct-----------a-a
i Pithecia_hirsuta.k141_305604                           I 1 C 0
s Pithecia_mittermeieri.k141_446740                          31070 22 +     52772 ga-cagagt-gaaagttca----------------------------------tct-----------a-a
i Pithecia_mittermeieri.k141_446740                      I 1 C 0
s Pithecia_pissinattii.k141_1824269                           6066 22 +     26198 ga-cagagt-gaaagttca----------------------------------tct-----------a-a
i Pithecia_pissinattii.k141_1824269                      I 1 C 0
s Pithecia_pithecia.tarseq_165                             3942597 22 +   4542175 ga-cagagt-gagagttca----------------------------------tct-----------a-a
i Pithecia_pithecia.tarseq_165                           I 1 C 0
s Pithecia_vanzolinii.k141_1697688                            6030 22 -     23490 ga-cagagt-gaaagttca----------------------------------tct-----------a-a
i Pithecia_vanzolinii.k141_1697688                       I 1 C 0
s Plecturocebus_bernhardi.k141_2549090                       10291 22 -     39866 aa-cacagt-gagagttca----------------------------------tct-----------a-a
i Plecturocebus_bernhardi.k141_2549090                   I 2 C 0
s Plecturocebus_brunneus.k141_1495506                        19455 22 +     34906 aa-cacagt-gagagttca----------------------------------tct-----------a-a
i Plecturocebus_brunneus.k141_1495506                    I 2 C 0
s Plecturocebus_caligatus.k141_1382851                       23717 22 +     87950 aa-cacagt-gagagttca----------------------------------tct-----------a-a
i Plecturocebus_caligatus.k141_1382851                   I 2 C 0
s Plecturocebus_cinerascens.k141_1164729                     24547 22 +     88961 aa-cacagt-gagagttca----------------------------------tct-----------a-a
i Plecturocebus_cinerascens.k141_1164729                 I 2 C 0
s Plecturocebus_cupreus.k141_2351393                         10214 22 +     39403 aa-cacagt-gagagttca----------------------------------tct-----------a-a
i Plecturocebus_cupreus.k141_2351393                     I 2 C 0
s Plecturocebus_dubius.k141_1058799                          23997 22 -     87928 aa-cacagt-gagagttca----------------------------------tct-----------a-a
i Plecturocebus_dubius.k141_1058799                      I 2 C 0
s Plecturocebus_grovesi.k141_2013005                         30958 22 +     60166 aa-cacagt-gagagttca----------------------------------tct-----------a-a
i Plecturocebus_grovesi.k141_2013005                     I 2 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      31154 22 +     67232 aa-cacagt-gagagttca----------------------------------tct-----------a-a
i Plecturocebus_hoffmannsi.k141_3303950                  I 2 C 0
s Plecturocebus_miltoni.k141_349282                          26627 23 +     90634 aa-cacagt-gagagttca----------------------------------tct-----------aaa
i Plecturocebus_miltoni.k141_349282                      I 2 C 0
s Plecturocebus_moloch.k141_1031110                          24000 22 -     89403 aa-cacagt-gagagttca----------------------------------tct-----------a-a
i Plecturocebus_moloch.k141_1031110                      I 2 C 0
s Pongo_abelii.NDHI03003595.1                                 6222 34 -     34550 gaccagagt-gagaattca----------------------------------tctcNNNNNNNNNaa-a
i Pongo_abelii.NDHI03003595.1                            I 452 I 1570
s Pongo_pygmaeus.ctg66                                     9574997 33 +   9816681 ga-cagagt-gagaattca----------------------------------tctcNNNNNNNNNaa-T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               77575 22 -     81375 aa-cagact-aagaattca----------------------------------tca-----------a-a
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              9406 22 +     19060 aa-cagact-aagaattca----------------------------------tca-----------a-a
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Pygathrix_cinerea.k141_1153803                             19385 22 -     91421 ga-cagact-aagaattca----------------------------------tcA-----------A-A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7613508 22 +   7812017 ga-cagact-aagaattca----------------------------------tcA-----------A-A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             19415 22 -     72585 ga-cagact-aagaattca----------------------------------tcA-----------A-A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_217274                            11082 22 -     11128 ga-cagact-aagaattca----------------------------------tcA-----------A-T
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91240448 22 - 195417433 ga-cagact-AAGAATtca----------------------------------tca-----------a-t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7676097 22 +   7961872 aa-cagact-aagaattca----------------------------------tcA-----------A-A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Semnopithecus_entellus.k141_1672505                         4256 22 -     12572 ga-aagact-aagagttca----------------------------------tcA-----------A-A
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      31108 22 +     39453 ga-aagact-aagaattca----------------------------------tcA-----------A-A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           11612 22 +     27826 ga-aagact-aagaattca----------------------------------tcA-----------A-A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            11157 22 -     19483 ga-aagact-aagaattca----------------------------------tcA-----------A-A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      4455 22 -     12762 ga-aagact-aagaattca----------------------------------tcA-----------A-A
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           4300 22 +     13763 ga-aagact-aagaattca----------------------------------tcA-----------A-A
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Tarsius_lariang.k141_2201908                               28207 22 +     70052 aa-cggagt-gagactcca----------------------------------act-----------c-a
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                3004 22 -     16117 aa-cggagt-gagactcca----------------------------------act-----------c-a
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186432779 22 + 186847797 aa-cagact-aagaattca----------------------------------tca-----------a-a
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                         15194 22 -     20410 ga-aagact-aagaattca----------------------------------tcA-----------A-A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      4317 22 -     12674 ga-aagact-aagaattca----------------------------------tcA-----------A-A
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       15302 22 +     19930 ga-aagact-aagaattca----------------------------------tcA-----------A-A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      11704 22 -     19997 ga-aagact-aagaattca----------------------------------tct-----------A-T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            51845 22 -     60166 ga-aagact-aagaattca----------------------------------tcA-----------A-A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        19308 22 -     27529 ga-aagact-aagaattca----------------------------------tcA-----------A-A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                        940 22 +      9229 ga-aagact-aagaattca----------------------------------tct-----------A-T
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          12842 22 -     21137 ga-aagact-aagaattca----------------------------------tcA-----------A-A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                     942 22 +      9131 ga-aagact-aagaattca----------------------------------tct-----------A-T
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                          906 22 -      3730 ga-aagact-aagaattca----------------------------------tcA-----------A-A
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        29174 22 +     32220 ga-aagact-aagaattca----------------------------------tcA-----------A-A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5943271 22 +   6242583 ga-aagact-aagaattca----------------------------------tcA-----------A-A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       12523 22 +     20839 ga-aagact-aagaattca----------------------------------tca-----------a-a
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Mus_pahari.LT608297.1                                   31358180  0 -  89631738 C
e Mus_spretus.CM004101.1                                  90755945  0 - 130317789 C
e Mus_musculus.chr8                                       87653455  0 - 129401213 C
e Mus_caroli.LT608237.1                                   84363955  0 - 120012414 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Ziphius_cavirostris.ZipCav_flattened_line_761354             719  6 -      1267 I
e Zapus_hudsonius.ZapHud_scaffold_11398                      16793  7 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Xerus_inauris.XerIna_scaffold_2302                          3257  5 +    224448 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 12841 537 -     43706 I
e Vicugna_pacos.KN270157.1                                 5374072  6 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Uropsilus_gracilis.UroGra_scaffold_12083                   55372  6 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15740414  6 +  33153633 I
e Tupaia_tana.TupTan_flattened_line_306982                    1618  5 -      4186 I
e Tupaia_chinensis.KB320699.1                              2159204  5 +   4065304 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_40725                    2573 51 +     27266 I
e Tonatia_saurophila.TonSau_scaffold_294                     83151  6 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_85600                    4543  5 +     18632 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              107540  0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    389823 643 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      121344 643 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                13349  6 +     41958 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6813808  6 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629              20670  6 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Spermophilus_dauricus.KZ294078.1                         1956222  0 -   3870691 C
e Sorex_araneus.JH798187.1                                13653119  6 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_42075                     3130  9 -     30804 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    155296  6 -    313613 I
e Saiga_tatarica.SaiTat_scaffold_133311                       1161  6 +      9503 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                90011  6 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        368985  6 -   3329780 I
e Rattus_norvegicus.chr16                                 53573542  0 +  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  8679  6 +     55207 I
e Puma_concolor.QAVW01001104.1                            20276437  6 -  38429054 I
e Pteropus_vampyrus.KN525825.1                             1361922  6 +   4952924 I
e Pteropus_alecto.KB030862.1                              22978937  6 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Pteronotus_parnellii.KE909381.1                            16878  6 -     21811 I
e Psammomys_obesus.NESX01036370.1                            13232  0 -     21651 C
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_173610            536  6 +      7680 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             3967  6 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159              11230  6 +     63832 I
e Petromus_typicus.PetTyp_scaffold_221660                      871  0 -      2102 C
e Peromyscus_maniculatus.KI615324.1                       18214100  8 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14679  6 -     78924 I
e Pantholops_hodgsonii.KE114653.1                          1268562  6 -   2937107 I
e Panthera_tigris.KE722367.1                               4723374  6 -   8748460 I
e Panthera_pardus.KV860321.1                                266549  6 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  153238  6 +    230217 I
e Ovis_canadensis.OviCan_scaffold_2572                      177829  6 -    191736 I
e Ovis_aries.CM001607.2                                   17589627  6 +  44047080 I
e Otocyon_megalotis.JAEUCK010005147.1                       464401 867 -    559221 I
e Oryctolagus_cuniculus.CM000791.1                        67149665 1414 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Orcinus_orca.KB316932.1                                  2784161  6 -  10937097 I
e Onychomys_torridus.OnyTor_scaffold_2986                    83355  7 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_7387                      428  9 +    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          79160 1803 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         146844  6 +    630418 I
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Octodon_degus.JH651603.1                                  749928  0 +  11899542 C
e Ochotona_princeps.JH802162.1                             1367073  5 +   3988456 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9151314 530 -   9404916 I
e Noctilio_leporinus.NocLep_scaffold_251                    759583  6 +    783361 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5868268  6 +   7148211 I
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Nannospalax_galili.KL204518.1                            3931309  0 -   9623020 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_44643                          630  6 +     25416 I
e Myotis_lucifugus.GL429869.1                              3906328  6 -   4330536 I
e Myotis_davidii.KB100139.1                                1590216  6 -   6019432 I
e Myotis_brandtii.KE162005.1                                282898  6 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     73439  0 -     80779 C
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Muscardinus_avellanarius.MusAve_scaffold_82313              6918  8 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           9149  6 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   3323  6 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 143395  6 -    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                    29305  6 -    437263 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Miniopterus_schreibersii.MinSch_scaffold_18080             36084  6 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1852400  6 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                17806  6 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    5564  6 +     10310 I
e Mesocricetus_auratus.KB708134.1                         12184611 154 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 35599  0 +    140813 C
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Megaderma_lyra.MegLyr_scaffold_4542                        15387  6 -    207569 I
e Marmota_marmota.CZRN01000018.1                          33105375  5 -  40650429 I
e Manis_pentadactyla.KN006162.1                              53022 987 -    317179 I
e Manis_javanica.JSZB01003497.1                              20877 990 +    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_8222                 92851  6 +     94391 I
e Lycaon_pictus.CM007581.1                                17957377 535 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             270181  6 -    662738 I
e Lepus_americanus.LepAme_scaffold_107385                     8427 743 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Lasiurus_borealis.LasBor_scaffold_32767                    18900  6 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_81059                  872  6 -     18011 I
e Jaculus_jaculus.JH725527.1                               8278673 121 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_34779                1126  6 -     31341 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7523065  0 -   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                      85084  0 +    135385 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23782  0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  47158  6 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_101188               1095  6 +      9903 I
e Hipposideros_armiger.JXIK01000431.1                       112523  6 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112776  9 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20664158  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 21876  6 +     36099 I
e Helogale_parvula.HelPar_flattened_line_2585               244410  6 +    327341 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Graphiurus_murinus.GraMur_scaffold_10447                   35448  5 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            33443  5 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     611277  6 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_108840               4751  5 -      9135 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Fukomys_damarensis.KN121974.1                             852512  0 +   3816255 C
e Felis_nigripes.FelNig_flattened_line_20823                 11702  6 -     36744 I
e Felis_catus_fca126.CM031415.1                           20198042  6 + 205367284 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Eubalaena_japonica.EubJap_flattened_line_31514             27295  6 -     44125 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           13349  6 +    133382 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               35993 651 +    498745 I
e Equus_caballus.CM000403.2                               18533964 651 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1286155 651 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2149194  6 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Ellobius_talpinus.LOJH01081419.1                            3254  9 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          23333  9 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       314042  6 +    607251 I
e Eidolon_helvum.AWHC01278734.1                                731  6 +      2334 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 35526  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    38384  0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    8624 649 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  675871 642 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8632059  6 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16813920  6 +  35494412 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            69490  5 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_15900             2011  0 -     75252 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  38182  0 +     51376 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             30602  6 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_2013195               78  0 +       399 I
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_18520                 52814  0 +     63868 C
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           2481  6 +     23735 I
e Condylura_cristata.JH655891.1                           17550974 13 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1254902  0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            6469  5 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5047 647 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                       102948  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18364066  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18351806  0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     96223  6 +    217609 I
e Castor_canadensis.CasCan_scaffold_2074                    139345  5 +    179628 I
e Carollia_perspicillata.CarPer_scaffold_92756                7059  6 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                    3253  0 -     12242 C
e Capra_hircus.CM004588.1                                 18064388  6 -  44709034 I
e Capra_aegagrus.CM003241.1                               18833571  6 +  46296322 I
e Canis_lupus_orion.HG994398.1                            18502439 535 +  63665305 I
e Canis_lupus_familiaris.chr16                            17961137 535 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9036666 537 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     1966 535 -     43241 I
e CanFam4.chr16                                           17801223 537 -  60362399 I
e Camelus_ferus.KB017975.1                                  405326  6 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2337028  6 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10004556  6 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2823099  6 +   4408762 I
e Bos_taurus.CM000203.6                                   18087146  6 +  45695690 I
e Bos_mutus.JH880303.1                                     1129062  6 -   1948126 I
e Bos_indicus.CM003047.1                                  20276508  6 +  48749331 I
e Bison_bison.KN261452.1                                    203269  6 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    30657  6 +     34529 I
e Balaenoptera_bonaerensis.DF707048.1                         4502  6 -     18090 I
e Balaenoptera_acutorostrata.KI537508.1                   15194037  6 +  23207421 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6715  6 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      14769  5 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_43303               840  6 -     32520 I
e Anoura_caudifer.AnoCau_scaffold_1412                      187308  3 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          679561  6 -   2318259 I
e Allactaga_bullata.AllBul_scaffold_9566                     75924 121 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T
e Acomys_cahirinus.AcoCah_scaffold_12655                     73571  0 +     87051 C
e Acinonyx_jubatus.LLWD01001279.1                           829423  6 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      11074  2 +     62944 A-------------------T
s Acinonyx_jubatus.LLWD01001279.1                           829429  1 -   1699592 A--------------------
i Acinonyx_jubatus.LLWD01001279.1                        I 6 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     73571  2 +     87051 G-------------------G
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   18923  2 -     52922 A-------------------T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         18859  2 -     28001 A-------------------T
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          9354  2 -     18505 A-------------------T
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                          10207  2 -     12518 A-------------------T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             10564  2 +     51355 a-------------------a
i Alouatta_belzebul.k141_3560514                         I 1 C 0
s Alouatta_caraya.k141_1701091                                3671  2 -     36483 a-------------------a
i Alouatta_caraya.k141_1701091                           I 1 C 0
s Alouatta_discolor.k141_566626                              14124  2 +     28687 a-------------------a
i Alouatta_discolor.k141_566626                          I 1 C 0
s Alouatta_juara.k141_1302312                                 2596  2 +     27940 a-------------------a
i Alouatta_juara.k141_1302312                            I 1 C 0
s Alouatta_macconnelli.k141_918386                            3684  2 -      9457 a-------------------a
i Alouatta_macconnelli.k141_918386                       I 1 C 0
s Alouatta_nigerrima.k141_1929159                             2642  2 +     30492 a-------------------a
i Alouatta_nigerrima.k141_1929159                        I 1 C 0
s Alouatta_palliata.k141_2135620                              6859  2 +     47717 a-------------------a
i Alouatta_palliata.k141_2135620                         I 1 C 0
s Alouatta_puruensis.k141_362188                              3364  2 +      5663 a-------------------a
i Alouatta_puruensis.k141_362188                         I 1 C 0
s Alouatta_seniculus.k141_117119                             17815  2 +     50774 a-------------------a
i Alouatta_seniculus.k141_117119                         I 1 C 0
s Ammotragus_lervia.NIVO01071767.1                          679567  2 -   2318259 a-------------------a
i Ammotragus_lervia.NIVO01071767.1                       I 6 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      187311  1 +    412891 --------------------C
i Anoura_caudifer.AnoCau_scaffold_1412                   I 3 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303               846  2 -     32520 A-------------------A
i Antilocapra_americana.AntAmePen_scaffold_43303         I 6 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      14774  2 +     20879 G-------------------A
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 5 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6721  2 +     43469 A-------------------A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 6 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21211057  2 -  21539123 a-------------------a
i Ateles_geoffroyi_b.tarseq_1536                            I 1 C 0
s Ateles_belzebuth.k141_445860                               45856  2 -     48001 a-------------------a
i Ateles_belzebuth.k141_445860                           I 1 C 0
s Ateles_chamek.k141_1806455                                 28657  2 -     30947 a-------------------a
i Ateles_chamek.k141_1806455                             I 1 C 0
s Ateles_geoffroyi_a.k141_833924                               10432  2 -     89868 a-------------------a
i Ateles_geoffroyi_a.k141_833924                           I 1 C 0
s Ateles_marginatus.k141_803263                              14814  2 -     40414 a-------------------a
i Ateles_marginatus.k141_803263                          I 1 C 0
s Ateles_paniscus.k141_457735                                22702  2 +     72325 a-------------------a
i Ateles_paniscus.k141_457735                            I 1 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15194043  2 +  23207421 a-------------------g
i Balaenoptera_acutorostrata.KI537508.1                  I 6 C 0
s Balaenoptera_bonaerensis.DF707048.1                         4508  2 -     18090 a-------------------g
i Balaenoptera_bonaerensis.DF707048.1                    I 6 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    30663  2 +     34529 A-------------------A
i Beatragus_hunteri.BeaHun_scaffold_50177                I 6 C 0
s Bison_bison.KN261452.1                                    203275  2 -    288883 A-------------------A
i Bison_bison.KN261452.1                                 I 6 C 0
s Bos_indicus.CM003047.1                                  20276514  2 +  48749331 a-------------------a
i Bos_indicus.CM003047.1                                 I 6 C 0
s Bos_mutus.JH880303.1                                     1129068  2 -   1948126 a-------------------a
i Bos_mutus.JH880303.1                                   I 6 C 0
s Bos_taurus.CM000203.6                                   18087152  2 +  45695690 a-------------------a
i Bos_taurus.CM000203.6                                  I 6 C 0
s Bubalus_bubalis.KI419123.1                               2823105  2 +   4408762 a-------------------a
i Bubalus_bubalis.KI419123.1                             I 6 C 0
s Cacajao_ayresi.k141_552049                                103674  2 -    122966 a-------------------a
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   63177  2 +     81800 a-------------------a
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  32359  2 -     95584 a-------------------a
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         56460  2 -    119600 a-------------------a
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10004562  1 -  17673402 a--------------------
i Camelus_bactrianus.KN276810.1                          I 6 C 0
s Camelus_dromedarius.KN272107.1                           2337034  1 -   7040546 a--------------------
i Camelus_dromedarius.KN272107.1                         I 6 C 0
s Camelus_ferus.KB017975.1                                  405332  1 -   1652518 a--------------------
i Camelus_ferus.KB017975.1                               I 6 C 0
s Capra_aegagrus.CM003241.1                               18833577  2 +  46296322 A-------------------A
i Capra_aegagrus.CM003241.1                              I 6 C 0
s Capra_hircus.CM004588.1                                 18064394  2 -  44709034 a-------------------a
i Capra_hircus.CM004588.1                                I 6 C 0
s Carlito_syrichta.NW_007259797.1                           157733  2 -    496798 a-------------------a
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                7065  2 -     11696 A-------------------A
i Carollia_perspicillata.CarPer_scaffold_92756           I 6 C 0
s Castor_canadensis.CasCan_scaffold_2074                    139350  2 +    179628 G-------------------G
i Castor_canadensis.CasCan_scaffold_2074                 I 5 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     96229  2 +    217609 a-------------------a
i Catagonus_wagneri.CatWag_scaffold_2839                 I 6 C 0
s Cephalopachus_bancanus.k141_1423433                         7230  2 +     31688 a-------------------a
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4479875  2 +   4669795 a-------------------t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        4374  2 +     17872 A-------------------T
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4964  2 -     14043 A-------------------T
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          13062  2 +     27781 A-------------------T
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        13219  2 -     20310 A-------------------T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          16195  2 +     29689 A-------------------T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10955  2 -     20078 A-------------------T
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          18866  1 -     27936 A--------------------
i Cercopithecus_hamlyni.k141_187466                      C 0 I 6
s Cercopithecus_lowei.k141_1854285                            7741  2 -     17152 A-------------------T
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38827465  2 +  39242232 A-------------------T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226973  2 -  21565898 A-------------------T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       44092  1 -     53127 A--------------------
i Cercopithecus_neglectus.k141_2526306                   C 0 I 2
s Cercopithecus_nictitans.k141_1119862                        4342  2 +     13442 A-------------------T
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       18888  2 -     27947 A-------------------T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1913  2 +     10558 A-------------------T
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4922  2 +     14005 A-------------------T
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            6474  2 -      8501 A-------------------A
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       I 5 C 0
s Cheracebus_lucifer.k141_49986                               2280  2 -     17098 a-------------------g
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              2156  2 +     17877 a-------------------a
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            159723  2 -    216457 a-------------------a
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          64192  2 +     76511 a-------------------a
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chiropotes_israelita.k141_747660                          100803  2 +    146308 a-------------------a
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          32610  2 -     50570 a-------------------a
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18432792  1 -  18827391 A--------------------
i Chlorocebus_aethiops.ctg25                             C 0 I 2
s Chlorocebus_pygerythrus.k141_1025673                       19289  1 -     50209 A--------------------
i Chlorocebus_pygerythrus.k141_1025673                   C 0 I 2
s Chlorocebus_sabaeus.CM001947.1                         135426293  2 + 135778131 a-------------------t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1914813  2 +   2368649 a-------------------t
i Colobus_angolensis.KN981557.1                          I 19 C 0
s Colobus_guereza.LG01                                   199953061  2 + 200372422 A-------------------T
i Colobus_guereza.LG01                                   I 19 C 0
s Colobus_polykomos.k141_906115                              41336  2 +     84244 a-------------------t
i Colobus_polykomos.k141_906115                          I 21 I 34
s Condylura_cristata.JH655891.1                           17550987  2 -  53390261 a-------------------t
i Condylura_cristata.JH655891.1                          I 13 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           2487  2 +     23735 a-------------------a
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      I 6 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 52814  2 +     63868 G-------------------G
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_1059839               18  2 +      1008 A-------------------A
i Crocidura_indochinensis.CroInd_scaffold_1059839        n 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             30608  1 -     87169 A--------------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 6 C 0
s Dasypus_novemcinctus.JH564415.1                            69495  2 +   2246927 a-------------------a
i Dasypus_novemcinctus.JH564415.1                        I 5 C 0
s Delphinapterus_leucas.KZ290073.1                        16813926  2 +  35494412 a-------------------g
i Delphinapterus_leucas.KZ290073.1                       I 6 C 0
s Desmodus_rotundus.KZ672289.1                             8632065  2 +  20541912 a-------------------a
i Desmodus_rotundus.KZ672289.1                           I 6 C 0
s Eidolon_helvum.AWHC01278734.1                                737  2 +      2334 A-------------------A
i Eidolon_helvum.AWHC01278734.1                          I 6 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       314048  2 +    607251 a-------------------a
i Elaphurus_davidianus.JRFZ01104969.1                    I 6 C 0
s Ellobius_lutescens.LOEQ01008920.1                          23342  2 -    110024 G-------------------G
i Ellobius_lutescens.LOEQ01008920.1                      I 9 C 0
s Ellobius_talpinus.LOJH01081419.1                            3263  2 +      8657 G-------------------G
i Ellobius_talpinus.LOJH01081419.1                       I 9 C 0
s Eptesicus_fuscus.JH977646.1                              2149200  2 -  14770903 a-------------------a
i Eptesicus_fuscus.JH977646.1                            I 6 C 0
s Erythrocebus_patas.Contig38                             21209464  2 -  21539334 A-------------------T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           13355  2 +    133382 a-------------------g
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 6 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             27301  2 -     44125 a-------------------g
i Eubalaena_japonica.EubJap_flattened_line_31514         I 6 C 0
s Felis_catus.CM001381.2                                  20239173  1 + 206538554 a--------------------
i Felis_catus.CM001381.2                                 I 6 C 0
s Felis_catus_fca126.CM031415.1                           20198048  1 + 205367284 a--------------------
i Felis_catus_fca126.CM031415.1                          I 6 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 11708  1 -     36744 A--------------------
i Felis_nigripes.FelNig_flattened_line_20823             I 6 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               4756  2 -      9135 G-------------------A
i Galeopterus_variegatus.GalVar_scaffold_108840          I 5 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     611283  2 -    660261 a-------------------a
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 6 C 0
s Glis_glis.GliGli_scaffold_19807                            33448  2 +     49224 g-------------------a
i Glis_glis.GliGli_scaffold_19807                        I 5 C 0
s Gorilla_beringei.k141_3596273                              20299  2 -     32273 a-------------------T
i Gorilla_beringei.k141_3596273                          I 24 C 0
s Gorilla_gorilla.LT578341.1                             186342435  2 + 186649187 a-------------------t
i Gorilla_gorilla.LT578341.1                             I 24 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   35453  2 +     78134 A-------------------A
i Graphiurus_murinus.GraMur_scaffold_10447               I 5 C 0
s Helogale_parvula.HelPar_flattened_line_2585               244416  1 +    327341 A--------------------
i Helogale_parvula.HelPar_flattened_line_2585            I 6 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 21882  2 +     36099 a-------------------a
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 6 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112785  2 +    128679 A-------------------A
i Hippopotamus_amphibius.HipAmp_scaffold_9076            I 9 C 0
s Hipposideros_armiger.JXIK01000431.1                       112529  2 +   1711038 a-------------------a
i Hipposideros_armiger.JXIK01000431.1                    I 6 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188               1101  2 +      9903 a-------------------a
i Hipposideros_galeritus.HipGal_scaffold_101188          I 6 C 0
s Hoolock_leuconedys.ctg274                                    439097 21 +    630532 aaaaaaaaaaaATATATATAT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  47164  1 +     55795 A--------------------
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 6 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                1132  2 -     31341 a-------------------g
i Inia_geoffrensis.IniGeo_flattened_line_34779           I 6 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                  878  2 -     18011 a-------------------g
i Kogia_breviceps.KogBre_flattened_line_81059            I 6 C 0
s Lagothrix_lagothricha.k141_1005387                         16859  2 -     38430 a-------------------a
i Lagothrix_lagothricha.k141_1005387                     I 1 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    18906  2 -     42476 A-------------------A
i Lasiurus_borealis.LasBor_scaffold_32767                I 6 C 0
s Lipotes_vexillifer.KE559953.1                             270187  2 -    662738 a-------------------g
i Lipotes_vexillifer.KE559953.1                          I 6 C 0
s Lophocebus_aterrimus.ctg367                              1441420  2 +   1826925 A-------------------T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                              11232  2 +     40492 A-------------------T
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59680486  2 +  60120075 A-------------------T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 17003  2 -     26193 A-------------------T
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            84779  2 -    114318 A-------------------T
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 10470  2 -     23192 A-------------------T
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19934  4 -     29190 A-----------TA------T
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  28512  4 +     37952 A-----------TA------T
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186843589  2 + 187317192 a-------------------t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25462167  4 -  25927173 ata-----------------t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  84368  4 +     89720 A-----------TA------T
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                11361  2 +     20474 C-------------------T
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  11158  4 -     14993 A-----------TA------T
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  334020  4 -    668171 A-----------TA------T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 9470  2 -     24072 A-------------------T
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               30101  4 -     45290 A-----------TA------T
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92857  2 +     94391 a-------------------a
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 6 C 0
s Mandrillus_leucophaeus.scaffold280                      23941689  2 -  24302211 A-------------------T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355804  2 +    752769 A-------------------T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33105380  2 -  40650429 g-------------------a
i Marmota_marmota.CZRN01000018.1                         I 5 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        15393  2 -    207569 A-------------------A
i Megaderma_lyra.MegLyr_scaffold_4542                    I 6 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 35599  2 +    140813 G-------------------C
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    5570  2 +     10310 a-------------------g
i Mesoplodon_bidens.MesBid_scaffold_108144               I 6 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                17812  2 -     19307 a-------------------a
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 6 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1852406  2 +   8254450 a-------------------a
i Miniopterus_natalensis.LDJU01000034.1                  I 6 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             36090  2 +     64694 a-------------------a
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 6 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    29311  2 -    437263 a-------------------g
i Monodon_monoceros.MonMon_M_scaffold_103                I 6 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 143401  2 -    366855 A-------------------A
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 6 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   3329  2 +     82753 A-------------------A
i Moschus_moschiferus.MosMos_scaffold_13123              I 6 C 0
s Murina_feae.MurFea_scaffold_85699                           9155  2 +     14753 a-------------------a
i Murina_feae.MurFea_scaffold_85699                      I 6 C 0
s Mus_caroli.LT608237.1                                   84363955  2 - 120012414 G-------------------G
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87653455  2 - 129401213 G-------------------G
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31358180  2 -  89631738 G-------------------G
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90755945  2 - 130317789 G-------------------G
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              6926  2 +     14296 A-------------------A
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 8 C 0
s Myotis_brandtii.KE162005.1                                282904  2 -  10118263 a-------------------a
i Myotis_brandtii.KE162005.1                             I 6 C 0
s Myotis_davidii.KB100139.1                                1590222  2 -   6019432 a-------------------a
i Myotis_davidii.KB100139.1                              I 6 C 0
s Myotis_lucifugus.GL429869.1                              3906334  2 -   4330536 a-------------------a
i Myotis_lucifugus.GL429869.1                            I 6 C 0
s Myotis_myotis.MyoMyo_scaffold_44643                          636  2 +     25416 a-------------------a
i Myotis_myotis.MyoMyo_scaffold_44643                    I 6 C 0
s Nannospalax_galili.KL204518.1                            3931309  2 -   9623020 G-------------------G
i Nannospalax_galili.KL204518.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               19416  2 +     21681 A-------------------T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5868274  2 +   7148211 a-------------------g
i Neophocaena_asiaeorientalis.KZ687982.1                 I 6 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    759589  2 +    783361 A-------------------A
i Noctilio_leporinus.NocLep_scaffold_251                 I 6 C 0
s Ochotona_princeps.JH802162.1                             1367078  2 +   3988456 C-------------------T
i Ochotona_princeps.JH802162.1                           I 5 C 0
s Odocoileus_virginianus.KZ100018.1                         146850  2 +    630418 a-------------------a
i Odocoileus_virginianus.KZ100018.1                      I 6 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          80963  2 -    150152 A-------------------A
i Okapia_johnstoni.LVCL01S0005463.1                      I 1803 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                      437  2 +    140218 G-------------------G
i Ondatra_zibethicus.OndZib_scaffold_7387                I 9 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    83362  2 +    102263 G-------------------G
i Onychomys_torridus.OnyTor_scaffold_2986                I 7 C 0
s Orcinus_orca.KB316932.1                                  2784167  2 -  10937097 a-------------------g
i Orcinus_orca.KB316932.1                                I 6 C 0
s Ovis_aries.CM001607.2                                   17589633  2 +  44047080 A-------------------A
i Ovis_aries.CM001607.2                                  I 6 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      177835  2 -    191736 A-------------------A
i Ovis_canadensis.OviCan_scaffold_2572                   I 6 C 0
s Pan_troglodytes.CM009242.2                             189147285  2 + 189151597 a-------------------t
i Pan_troglodytes.CM009242.2                             I 56 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  153244  1 +    230217 A--------------------
i Panthera_onca.PanOnc_flattened_line_3271               I 6 C 0
s Panthera_pardus.KV860321.1                                266555  1 +  18783137 a--------------------
i Panthera_pardus.KV860321.1                             I 6 C 0
s Panthera_tigris.KE722367.1                               4723380  1 -   8748460 a--------------------
i Panthera_tigris.KE722367.1                             I 6 C 0
s Pantholops_hodgsonii.KE114653.1                          1268568  2 -   2937107 a-------------------a
i Pantholops_hodgsonii.KE114653.1                        I 6 C 0
s Papio_anubis.CM001495.2                                183447493  2 + 183742232 a-------------------t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            11143  2 +     20448 A-------------------T
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567951  2 +  20919399 a-------------------a
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   9897  2 +     41871 A-------------------T
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    13176  2 +     27711 A-------------------T
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  4175  2 -     11374 A-------------------T
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14685  1 -     78924 A--------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 6 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              11236  2 +     63832 a-------------------g
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 6 C 0
s Piliocolobus_badius.k141_1142974                            2522  2 +     68526 A-------------------T
i Piliocolobus_badius.k141_1142974                       I 24 C 0
s Piliocolobus_gordonorum.k141_381342                        42663  2 +     89929 A-------------------T
i Piliocolobus_gordonorum.k141_381342                    I 22 C 0
s Piliocolobus_kirkii.k141_448987                            44079  2 +     51399 A-------------------T
i Piliocolobus_kirkii.k141_448987                        I 24 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14300316  2 -  14605196 a-------------------t
i Piliocolobus_tephrosceles.PDMG02000141.1               I 24 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3973  2 +     22620 a-------------------a
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 6 C 0
s Pithecia_albicans.k141_1476471                              6074  2 +     26961 a-------------------a
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          2202  2 +     23417 a-------------------a
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                6066  2 +     29694 a-------------------a
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          31092  2 +     52772 a-------------------a
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           6088  2 +     26198 a-------------------a
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3942619  2 +   4542175 a-------------------a
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            6052  2 -     23490 a-------------------a
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610            542  2 +      7680 a-------------------g
i Platanista_gangetica.PlaMin_flattened_line_173610      I 6 C 0
s Plecturocebus_bernhardi.k141_2549090                       10313  2 -     39866 a-------------------a
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        19477  2 +     34906 a-------------------a
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       23739  2 +     87950 a-------------------a
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     24569  2 +     88961 a-------------------a
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         10236  2 +     39403 a-------------------a
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          24019  2 -     87928 a-------------------a
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         30980  2 +     60166 a-------------------a
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      31176  2 +     67232 a-------------------a
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          26650  2 +     90634 a-------------------a
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          24022  2 -     89403 a-------------------a
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189135420  2 + 189387572 a-------------------t
i Pongo_abelii.CM009266.2                                I 33 C 0
s Pongo_pygmaeus.ctg66                                     9575030  2 +   9816681 A-------------------T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               77597  2 -     81375 a-------------------a
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              9428  2 +     19060 a-------------------a
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            13232  2 -     21651 G-------------------C
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            16884  2 -     21811 A-------------------A
i Pteronotus_parnellii.KE909381.1                        I 6 C 0
s Pteropus_alecto.KB030862.1                              22978943  2 +  28871421 a-------------------a
i Pteropus_alecto.KB030862.1                             I 6 C 0
s Pteropus_vampyrus.KN525825.1                             1361928  2 +   4952924 A-------------------A
i Pteropus_vampyrus.KN525825.1                           I 6 C 0
s Puma_concolor.QAVW01001104.1                            20276443  1 -  38429054 a--------------------
i Puma_concolor.QAVW01001104.1                           I 6 C 0
s Pygathrix_cinerea.k141_1153803                             19407  2 -     91421 A-------------------T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7613530  2 +   7812017 A-------------------T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             19437  2 -     72585 A-------------------T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  8685  2 +     55207 a-------------------a
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 6 C 0
s Rattus_norvegicus.chr16                                 53573542  2 +  90668790 G-------------------G
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        368991  2 -   3329780 a-------------------a
i Rhinolophus_sinicus.LVEH01000134.1                     I 6 C 0
s Rhinopithecus_bieti.k119_217274                            11104  2 -     11128 A-------------------T
i Rhinopithecus_bieti.k119_217274                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91240470  2 - 195417433 a-------------------t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7676119  2 +   7961872 A-------------------T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                90017  2 -     96226 A-------------------A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 6 C 0
s Saiga_tatarica.SaiTat_scaffold_133311                       1167  2 +      9503 a-------------------a
i Saiga_tatarica.SaiTat_scaffold_133311                  I 6 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    155302  2 -    313613 A-------------------A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 6 C 0
s Semnopithecus_entellus.k141_1672505                         4278  2 -     12572 A-------------------T
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      31130  2 +     39453 A-------------------T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           11634  2 +     27826 A-------------------T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            11179  2 -     19483 A-------------------T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      4477  2 -     12762 A-------------------T
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           4322  2 +     13763 A-------------------T
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     3139  2 -     30804 G-------------------G
i Sigmodon_hispidus.SigHis_scaffold_42075                I 9 C 0
s Sorex_araneus.JH798187.1                                13653125  2 -  18376816 A-------------------A
i Sorex_araneus.JH798187.1                               I 6 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              20676  1 -    196729 G--------------------
i Suricata_suricatta.SurSur_flattened_line_6629          I 6 C 0
s Sus_scrofa.CM000828.4                                    6813814  2 +  69701581 a-------------------a
i Sus_scrofa.CM000828.4                                  I 6 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                13355  2 +     41958 a-------------------a
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 6 C 0
s Tarsius_lariang.k141_2201908                               28229  2 +     70052 a-------------------a
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                3026  2 -     16117 a-------------------a
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186432801  2 + 186847797 a-------------------t
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_85600                    4548  2 +     18632 A-------------------A
i Tolypeutes_matacus.TolMat_scaffold_85600               I 5 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     83157  2 +    610378 a-------------------a
i Tonatia_saurophila.TonSau_scaffold_294                 I 6 C 0
s Trachypithecus_auratus.k141_722599                         15216  2 -     20410 A-------------------T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      4339  2 -     12674 A-------------------T
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       15324  2 +     19930 A-------------------T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      11726  2 -     19997 A-------------------T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            51867  2 -     60166 A-------------------T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        19330  2 -     27529 A-------------------T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                        962  2 +      9229 A-------------------T
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          12864  2 -     21137 A-------------------T
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                     964  2 +      9131 A-------------------T
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                          928  2 -      3730 A-------------------T
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        29196  2 +     32220 A-------------------T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5943293  2 +   6242583 A-------------------T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       12545  2 +     20839 a-------------------a
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2159209  2 +   4065304 A-------------------A
i Tupaia_chinensis.KB320699.1                            I 5 C 0
s Tupaia_tana.TupTan_flattened_line_306982                    1623  2 -      4186 A-------------------A
i Tupaia_tana.TupTan_flattened_line_306982               I 5 C 0
s Tursiops_truncatus.MRVK01000835.1                       15740420  2 +  33153633 a-------------------g
i Tursiops_truncatus.MRVK01000835.1                      I 6 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   55378  2 -     77625 A-------------------A
i Uropsilus_gracilis.UroGra_scaffold_12083               I 6 C 0
s Vicugna_pacos.KN270157.1                                 5374078  1 -   5488506 a--------------------
i Vicugna_pacos.KN270157.1                               I 6 C 0
s Xerus_inauris.XerIna_scaffold_2302                          3262  2 +    224448 g-------------------a
i Xerus_inauris.XerIna_scaffold_2302                     I 5 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      16800  2 +     63895 A-------------------A
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 7 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_761354             725  2 -      1267 A-------------------G
i Ziphius_cavirostris.ZipCav_flattened_line_761354       I 6 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 12841 537 -     43706 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_40725                    2573 51 +     27266 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              107540  0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    389823 643 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      121344 643 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Spermophilus_dauricus.KZ294078.1                         1956222  0 -   3870691 C
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Petromus_typicus.PetTyp_scaffold_221660                      871  0 -      2102 C
e Peromyscus_maniculatus.KI615324.1                       18214100  8 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pan_paniscus.KQ411613.1                                    48411 14 +     80009 I
e Otocyon_megalotis.JAEUCK010005147.1                       464401 867 -    559221 I
e Oryctolagus_cuniculus.CM000791.1                        67149665 1414 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Octodon_degus.JH651603.1                                  749928  0 +  11899542 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9151314 530 -   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     73439  0 -     80779 C
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Miopithecus_ogouensis.k141_534055                          13370  0 -     28506 C
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184611 154 -  29670104 I
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Manis_pentadactyla.KN006162.1                              53022 987 -    317179 I
e Manis_javanica.JSZB01003497.1                              20877 990 +    737560 I
e Lycaon_pictus.CM007581.1                                17957377 535 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     8427 743 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Jaculus_jaculus.JH725527.1                               8278673 121 -   9596543 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7523065  0 -   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                      85084  0 +    135385 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23782  0 -    143317 C
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20664158  0 +  22651954 C
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Fukomys_damarensis.KN121974.1                             852512  0 +   3816255 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               35993 651 +    498745 I
e Equus_caballus.CM000403.2                               18533964 651 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1286155 651 +   4378816 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 35526  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    38384  0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    8624 649 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  675871 642 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasyprocta_punctata.DasPun_flattened_line_15900             2011  0 -     75252 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  38182  0 +     51376 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1254902  0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5047 647 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                       102948  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18364066  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18351806  0 -  23392119 C
e Capromys_pilorides.CapPil_scaffold_65020                    3253  0 -     12242 C
e Canis_lupus_orion.HG994398.1                            18502439 535 +  63665305 I
e Canis_lupus_familiaris.chr16                            17961137 535 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9036666 537 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     1966 535 -     43241 I
e CanFam4.chr16                                           17801223 537 -  60362399 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Allactaga_bullata.AllBul_scaffold_9566                     75924 121 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T

a score=0.000000
s hg38.chrUn_KI270753v1                                      11076 1 +     62944 A
s Acinonyx_jubatus.LLWD01001279.1                           829430 1 -   1699592 A
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 2
s Acomys_cahirinus.AcoCah_scaffold_12655                     73573 1 +     87051 A
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 2
s Allenopithecus_nigroviridis.k141_3361533                   18925 1 -     52922 A
i Allenopithecus_nigroviridis.k141_3361533               C 0 I 2
s Allochrocebus_lhoesti.k141_4309873                         18861 1 -     28001 A
i Allochrocebus_lhoesti.k141_4309873                     C 0 I 2
s Allochrocebus_preussi.k141_1442296                          9356 1 -     18505 A
i Allochrocebus_preussi.k141_1442296                     C 0 I 2
s Allochrocebus_solatus.k141_166128                          10209 1 -     12518 A
i Allochrocebus_solatus.k141_166128                      C 0 I 2
s Alouatta_belzebul.k141_3560514                             10566 1 +     51355 a
i Alouatta_belzebul.k141_3560514                         C 0 I 2
s Alouatta_caraya.k141_1701091                                3673 1 -     36483 a
i Alouatta_caraya.k141_1701091                           C 0 I 2
s Alouatta_discolor.k141_566626                              14126 1 +     28687 a
i Alouatta_discolor.k141_566626                          C 0 I 2
s Alouatta_juara.k141_1302312                                 2598 1 +     27940 a
i Alouatta_juara.k141_1302312                            C 0 I 2
s Alouatta_macconnelli.k141_918386                            3686 1 -      9457 a
i Alouatta_macconnelli.k141_918386                       C 0 I 2
s Alouatta_nigerrima.k141_1929159                             2644 1 +     30492 a
i Alouatta_nigerrima.k141_1929159                        C 0 I 2
s Alouatta_palliata.k141_2135620                              6861 1 +     47717 a
i Alouatta_palliata.k141_2135620                         C 0 I 2
s Alouatta_puruensis.k141_362188                              3366 1 +      5663 a
i Alouatta_puruensis.k141_362188                         C 0 I 2
s Alouatta_seniculus.k141_117119                             17817 1 +     50774 a
i Alouatta_seniculus.k141_117119                         C 0 I 2
s Ammotragus_lervia.NIVO01071767.1                          679569 1 -   2318259 a
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 2
s Anoura_caudifer.AnoCau_scaffold_1412                      187312 1 +    412891 A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 2
s Antilocapra_americana.AntAmePen_scaffold_43303               848 1 -     32520 A
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 I 2
s Aplodontia_rufa.AprRuf_scaffold_68852                      14776 1 +     20879 A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 2
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6723 1 +     43469 A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 2
s Ateles_geoffroyi_b.tarseq_1536                             21211059 1 -  21539123 a
i Ateles_geoffroyi_b.tarseq_1536                            C 0 I 2
s Ateles_belzebuth.k141_445860                               45858 1 -     48001 a
i Ateles_belzebuth.k141_445860                           C 0 I 2
s Ateles_chamek.k141_1806455                                 28659 1 -     30947 a
i Ateles_chamek.k141_1806455                             C 0 I 2
s Ateles_geoffroyi_a.k141_833924                               10434 1 -     89868 a
i Ateles_geoffroyi_a.k141_833924                           C 0 I 2
s Ateles_marginatus.k141_803263                              14816 1 -     40414 a
i Ateles_marginatus.k141_803263                          C 0 I 2
s Ateles_paniscus.k141_457735                                22704 1 +     72325 a
i Ateles_paniscus.k141_457735                            C 0 I 2
s Balaenoptera_acutorostrata.KI537508.1                   15194045 1 +  23207421 a
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 2
s Balaenoptera_bonaerensis.DF707048.1                         4510 1 -     18090 a
i Balaenoptera_bonaerensis.DF707048.1                    C 0 I 2
s Beatragus_hunteri.BeaHun_scaffold_50177                    30665 1 +     34529 A
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 2
s Bison_bison.KN261452.1                                    203277 1 -    288883 A
i Bison_bison.KN261452.1                                 C 0 I 2
s Bos_indicus.CM003047.1                                  20276516 1 +  48749331 a
i Bos_indicus.CM003047.1                                 C 0 I 2
s Bos_mutus.JH880303.1                                     1129070 1 -   1948126 a
i Bos_mutus.JH880303.1                                   C 0 I 2
s Bos_taurus.CM000203.6                                   18087154 1 +  45695690 a
i Bos_taurus.CM000203.6                                  C 0 I 2
s Bubalus_bubalis.KI419123.1                               2823107 1 +   4408762 a
i Bubalus_bubalis.KI419123.1                             C 0 I 2
s Cacajao_ayresi.k141_552049                                103676 1 -    122966 a
i Cacajao_ayresi.k141_552049                             C 0 I 2
s Cacajao_calvus.k141_5142                                   63179 1 +     81800 a
i Cacajao_calvus.k141_5142                               C 0 I 2
s Cacajao_hosomi.k141_81245                                  32361 1 -     95584 a
i Cacajao_hosomi.k141_81245                              C 0 I 2
s Cacajao_melanocephalus.k141_619699                         56462 1 -    119600 a
i Cacajao_melanocephalus.k141_619699                     C 0 I 2
s Camelus_bactrianus.KN276810.1                           10004563 1 -  17673402 a
i Camelus_bactrianus.KN276810.1                          C 0 I 2
s Camelus_dromedarius.KN272107.1                           2337035 1 -   7040546 a
i Camelus_dromedarius.KN272107.1                         C 0 I 2
s Camelus_ferus.KB017975.1                                  405333 1 -   1652518 a
i Camelus_ferus.KB017975.1                               C 0 I 2
s Capra_aegagrus.CM003241.1                               18833579 1 +  46296322 A
i Capra_aegagrus.CM003241.1                              C 0 I 2
s Capra_hircus.CM004588.1                                 18064396 1 -  44709034 a
i Capra_hircus.CM004588.1                                C 0 I 2
s Carlito_syrichta.NW_007259797.1                           157735 1 -    496798 a
i Carlito_syrichta.NW_007259797.1                        C 0 I 4
s Carollia_perspicillata.CarPer_scaffold_92756                7067 1 -     11696 A
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 2
s Castor_canadensis.CasCan_scaffold_2074                    139352 1 +    179628 A
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 2
s Catagonus_wagneri.CatWag_scaffold_2839                     96231 1 +    217609 a
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 2
s Cephalopachus_bancanus.k141_1423433                         7232 1 +     31688 a
i Cephalopachus_bancanus.k141_1423433                    C 0 I 4
s Cercocebus_atys.KQ010504.1                               4479877 1 +   4669795 a
i Cercocebus_atys.KQ010504.1                             C 0 I 2
s Cercocebus_chrysogaster.k141_1540778                        4376 1 +     17872 A
i Cercocebus_chrysogaster.k141_1540778                   C 0 I 2
s Cercocebus_lunulatus.k141_3342297                           4966 1 -     14043 A
i Cercocebus_lunulatus.k141_3342297                      C 0 I 2
s Cercocebus_torquatus.k141_3057011                          13064 1 +     27781 A
i Cercocebus_torquatus.k141_3057011                      C 0 I 2
s Cercopithecus_ascanius.k141_1024104                        13221 1 -     20310 A
i Cercopithecus_ascanius.k141_1024104                    C 0 I 2
s Cercopithecus_cephus.k141_1078548                          16197 1 +     29689 A
i Cercopithecus_cephus.k141_1078548                      C 0 I 2
s Cercopithecus_diana.k141_1150327                           10957 1 -     20078 A
i Cercopithecus_diana.k141_1150327                       C 0 I 4
s Cercopithecus_lowei.k141_1854285                            7743 1 -     17152 A
i Cercopithecus_lowei.k141_1854285                       C 0 I 2
s Cercopithecus_albogularis.ctg5                                38827467 1 +  39242232 A
i Cercopithecus_albogularis.ctg5                               C 0 I 2
s Cercopithecus_mona.ctg39                                21226975 1 -  21565898 A
i Cercopithecus_mona.ctg39                               C 0 I 2
s Cercopithecus_nictitans.k141_1119862                        4344 1 +     13442 A
i Cercopithecus_nictitans.k141_1119862                   C 0 I 2
s Cercopithecus_petaurista.k141_807961                       18890 1 -     27947 A
i Cercopithecus_petaurista.k141_807961                   C 0 I 2
s Cercopithecus_pogonias.k141_2303387                         1915 1 +     10558 A
i Cercopithecus_pogonias.k141_2303387                    C 0 I 2
s Cercopithecus_roloway.k141_2581234                          4924 1 +     14005 A
i Cercopithecus_roloway.k141_2581234                     C 0 I 6
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            6476 1 -      8501 A
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 I 2
s Cheracebus_lucifer.k141_49986                               2282 1 -     17098 a
i Cheracebus_lucifer.k141_49986                          C 0 I 2
s Cheracebus_lugens.k141_1393925                              2158 1 +     17877 a
i Cheracebus_lugens.k141_1393925                         C 0 I 2
s Cheracebus_regulus.k141_471822                            159725 1 -    216457 a
i Cheracebus_regulus.k141_471822                         C 0 I 2
s Cheracebus_torquatus.k141_1170026                          64194 1 +     76511 a
i Cheracebus_torquatus.k141_1170026                      C 0 I 2
s Chiropotes_israelita.k141_747660                          100805 1 +    146308 a
i Chiropotes_israelita.k141_747660                       C 0 I 2
s Chiropotes_sagulatus.k141_1421488                          32612 1 -     50570 a
i Chiropotes_sagulatus.k141_1421488                      C 0 I 2
s Chlorocebus_sabaeus.CM001947.1                         135426295 1 + 135778131 a
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 2
s Colobus_angolensis.KN981557.1                            1914815 1 +   2368649 a
i Colobus_angolensis.KN981557.1                          C 0 I 2
s Colobus_guereza.LG01                                   199953063 1 + 200372422 A
i Colobus_guereza.LG01                                   C 0 I 2
s Colobus_polykomos.k141_906115                              41372 1 +     84244 a
i Colobus_polykomos.k141_906115                          I 34 I 2
s Condylura_cristata.JH655891.1                           17550989 1 -  53390261 a
i Condylura_cristata.JH655891.1                          C 0 I 2
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           2489 1 +     23735 a
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 I 2
s Cricetomys_gambianus.CriGam_scaffold_18520                 52816 1 +     63868 A
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 2
s Crocidura_indochinensis.CroInd_scaffold_1059839               20 1 +      1008 A
i Crocidura_indochinensis.CroInd_scaffold_1059839        C 0 I 2
s Cryptoprocta_ferox.CryFer_flattened_line_16129             30609 1 -     87169 A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 2
s Dasypus_novemcinctus.JH564415.1                            69497 1 +   2246927 a
i Dasypus_novemcinctus.JH564415.1                        C 0 I 2
s Delphinapterus_leucas.KZ290073.1                        16813928 1 +  35494412 a
i Delphinapterus_leucas.KZ290073.1                       C 0 I 2
s Desmodus_rotundus.KZ672289.1                             8632067 1 +  20541912 a
i Desmodus_rotundus.KZ672289.1                           C 0 I 2
s Eidolon_helvum.AWHC01278734.1                                739 1 +      2334 A
i Eidolon_helvum.AWHC01278734.1                          C 0 I 2
s Elaphurus_davidianus.JRFZ01104969.1                       314050 1 +    607251 a
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 2
s Ellobius_lutescens.LOEQ01008920.1                          23344 1 -    110024 T
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 2
s Ellobius_talpinus.LOJH01081419.1                            3265 1 +      8657 T
i Ellobius_talpinus.LOJH01081419.1                       C 0 I 2
s Eptesicus_fuscus.JH977646.1                              2149202 1 -  14770903 a
i Eptesicus_fuscus.JH977646.1                            C 0 I 2
s Erythrocebus_patas.Contig38                             21209466 1 -  21539334 A
i Erythrocebus_patas.Contig38                            C 0 I 2
s Eschrichtius_robustus.EscRob_flattened_line_8968           13357 1 +    133382 a
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 2
s Eubalaena_japonica.EubJap_flattened_line_31514             27303 1 -     44125 a
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 I 2
s Felis_catus.CM001381.2                                  20239174 1 + 206538554 a
i Felis_catus.CM001381.2                                 C 0 I 2
s Felis_catus_fca126.CM031415.1                           20198049 1 + 205367284 a
i Felis_catus_fca126.CM031415.1                          C 0 I 2
s Felis_nigripes.FelNig_flattened_line_20823                 11709 1 -     36744 A
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 2
s Galeopterus_variegatus.GalVar_scaffold_108840               4758 1 -      9135 A
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 I 2
s Giraffa_tippelskirchi.LVKQ01S007888.1                     611285 1 -    660261 a
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 I 2
s Glis_glis.GliGli_scaffold_19807                            33450 1 +     49224 a
i Glis_glis.GliGli_scaffold_19807                        C 0 I 2
s Gorilla_beringei.k141_3596273                              20301 1 -     32273 A
i Gorilla_beringei.k141_3596273                          C 0 I 12
s Gorilla_gorilla.LT578341.1                             186342437 1 + 186649187 a
i Gorilla_gorilla.LT578341.1                             C 0 I 24
s Graphiurus_murinus.GraMur_scaffold_10447                   35455 1 +     78134 A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 2
s Helogale_parvula.HelPar_flattened_line_2585               244417 1 +    327341 A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 2
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 21884 1 +     36099 a
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 I 2
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112787 1 +    128679 A
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 I 2
s Hipposideros_armiger.JXIK01000431.1                       112531 1 +   1711038 t
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 2
s Hipposideros_galeritus.HipGal_scaffold_101188               1103 1 +      9903 a
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 I 2
s Hoolock_leuconedys.ctg274                                    439118 1 +    630532 A
i Hoolock_leuconedys.ctg274                                 C 0 I 6
s Hyaena_hyaena.HyaHya_flattened_line_26932                  47165 1 +     55795 A
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 2
s Inia_geoffrensis.IniGeo_flattened_line_34779                1134 1 -     31341 a
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 I 2
s Kogia_breviceps.KogBre_flattened_line_81059                  880 1 -     18011 a
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 I 2
s Lagothrix_lagothricha.k141_1005387                         16861 1 -     38430 a
i Lagothrix_lagothricha.k141_1005387                     C 0 I 2
s Lasiurus_borealis.LasBor_scaffold_32767                    18908 1 -     42476 A
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 2
s Lipotes_vexillifer.KE559953.1                             270189 1 -    662738 a
i Lipotes_vexillifer.KE559953.1                          C 0 I 2
s Lophocebus_aterrimus.ctg367                              1441422 1 +   1826925 A
i Lophocebus_aterrimus.ctg367                            C 0 I 2
s Macaca_arctoides.k141_2326796                              11234 1 +     40492 A
i Macaca_arctoides.k141_2326796                          C 0 I 2
s Macaca_assamensis.Contig5                               59680488 1 +  60120075 A
i Macaca_assamensis.Contig5                              C 0 I 2
s Macaca_cyclopis.k119_18836                                 17005 1 -     26193 A
i Macaca_cyclopis.k119_18836                             C 0 I 2
s Macaca_fascicularis.k141_814140                            84781 1 -    114318 A
i Macaca_fascicularis.k141_814140                        C 0 I 4
s Macaca_fuscata.k119_255327                                 10472 1 -     23192 A
i Macaca_fuscata.k119_255327                             C 0 I 2
s Macaca_leonina.k141_3550399                                19938 1 -     29190 A
i Macaca_leonina.k141_3550399                            C 0 I 2
s Macaca_maura.k141_2733130                                  28516 1 +     37952 A
i Macaca_maura.k141_2733130                              C 0 I 2
s Macaca_mulatta.NC_041758.1                             186843591 1 + 187317192 a
i Macaca_mulatta.NC_041758.1                             C 0 I 2
s Macaca_nemestrina.KQ007038.1                            25462171 1 -  25927173 a
i Macaca_nemestrina.KQ007038.1                           C 0 I 2
s Macaca_nigra.k141_1655396                                  84372 1 +     89720 A
i Macaca_nigra.k141_1655396                              C 0 I 4
s Macaca_radiata.k141_3680011                                11363 1 +     20474 A
i Macaca_radiata.k141_3680011                            C 0 I 2
s Macaca_siberu.k141_635500                                  11162 1 -     14993 A
i Macaca_siberu.k141_635500                              C 0 I 2
s Macaca_silenus.Contig273                                  334024 1 -    668171 A
i Macaca_silenus.Contig273                               C 0 I 2
s Macaca_thibetana.k99_256239                                 9472 1 -     24072 A
i Macaca_thibetana.k99_256239                            C 0 I 2
s Macaca_tonkeana.k141_1498238                               30105 1 -     45290 A
i Macaca_tonkeana.k141_1498238                           C 0 I 2
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92859 1 +     94391 a
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 2
s Mandrillus_leucophaeus.scaffold280                      23941691 1 -  24302211 A
i Mandrillus_leucophaeus.scaffold280                     C 0 I 2
s Mandrillus_sphinx.Contig270                               355806 1 +    752769 A
i Mandrillus_sphinx.Contig270                            C 0 I 2
s Marmota_marmota.CZRN01000018.1                          33105382 1 -  40650429 a
i Marmota_marmota.CZRN01000018.1                         C 0 I 2
s Megaderma_lyra.MegLyr_scaffold_4542                        15395 1 -    207569 A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 2
s Meriones_unguiculatus.MerUng_scaffold_7390                 35601 1 +    140813 A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 2
s Mesoplodon_bidens.MesBid_scaffold_108144                    5572 1 +     10310 a
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 I 2
s Micronycteris_hirsuta.MicHir_scaffold_52381                17814 1 -     19307 a
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 2
s Miniopterus_natalensis.LDJU01000034.1                    1852408 1 +   8254450 a
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 2
s Miniopterus_schreibersii.MinSch_scaffold_18080             36092 1 +     64694 a
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 2
s Miopithecus_ogouensis.k141_534055                          13370 1 -     28506 A
i Miopithecus_ogouensis.k141_534055                      C 0 I 2
s Monodon_monoceros.MonMon_M_scaffold_103                    29313 1 -    437263 a
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 2
s Mormoops_blainvillei.MorMeg_scaffold_1417                 143403 1 -    366855 A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 2
s Moschus_moschiferus.MosMos_scaffold_13123                   3331 1 +     82753 A
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 2
s Murina_feae.MurFea_scaffold_85699                           9157 1 +     14753 a
i Murina_feae.MurFea_scaffold_85699                      C 0 I 2
s Mus_caroli.LT608237.1                                   84363957 1 - 120012414 A
i Mus_caroli.LT608237.1                                  C 0 I 2
s Mus_musculus.chr8                                       87653457 1 - 129401213 A
i Mus_musculus.chr8                                      C 0 I 2
s Mus_pahari.LT608297.1                                   31358182 1 -  89631738 A
i Mus_pahari.LT608297.1                                  C 0 I 2
s Mus_spretus.CM004101.1                                  90755947 1 - 130317789 A
i Mus_spretus.CM004101.1                                 C 0 I 2
s Muscardinus_avellanarius.MusAve_scaffold_82313              6928 1 +     14296 A
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 3
s Myotis_brandtii.KE162005.1                                282906 1 -  10118263 a
i Myotis_brandtii.KE162005.1                             C 0 I 2
s Myotis_davidii.KB100139.1                                1590224 1 -   6019432 a
i Myotis_davidii.KB100139.1                              C 0 I 2
s Myotis_lucifugus.GL429869.1                              3906336 1 -   4330536 a
i Myotis_lucifugus.GL429869.1                            C 0 I 2
s Myotis_myotis.MyoMyo_scaffold_44643                          638 1 +     25416 a
i Myotis_myotis.MyoMyo_scaffold_44643                    C 0 I 2
s Nannospalax_galili.KL204518.1                            3931311 1 -   9623020 A
i Nannospalax_galili.KL204518.1                          C 0 I 7
s Nasalis_larvatus.k141_413338                               19418 1 +     21681 A
i Nasalis_larvatus.k141_413338                           C 0 I 2
s Neophocaena_asiaeorientalis.KZ687982.1                   5868276 1 +   7148211 a
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 2
s Noctilio_leporinus.NocLep_scaffold_251                    759591 1 +    783361 A
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 5
s Ochotona_princeps.JH802162.1                             1367080 1 +   3988456 A
i Ochotona_princeps.JH802162.1                           C 0 I 2
s Odocoileus_virginianus.KZ100018.1                         146852 1 +    630418 a
i Odocoileus_virginianus.KZ100018.1                      C 0 I 2
s Okapia_johnstoni.LVCL01S0005463.1                          80965 1 -    150152 A
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 2
s Ondatra_zibethicus.OndZib_scaffold_7387                      439 1 +    140218 T
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 2
s Onychomys_torridus.OnyTor_scaffold_2986                    83364 1 +    102263 T
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 2
s Orcinus_orca.KB316932.1                                  2784169 1 -  10937097 a
i Orcinus_orca.KB316932.1                                C 0 I 2
s Ovis_aries.CM001607.2                                   17589635 1 +  44047080 A
i Ovis_aries.CM001607.2                                  C 0 I 2
s Ovis_canadensis.OviCan_scaffold_2572                      177837 1 -    191736 A
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 I 2
s Pan_troglodytes.CM009242.2                             189147287 1 + 189151597 a
i Pan_troglodytes.CM009242.2                             C 0 I 25
s Panthera_onca.PanOnc_flattened_line_3271                  153245 1 +    230217 A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 2
s Panthera_pardus.KV860321.1                                266556 1 +  18783137 a
i Panthera_pardus.KV860321.1                             C 0 I 2
s Panthera_tigris.KE722367.1                               4723381 1 -   8748460 a
i Panthera_tigris.KE722367.1                             C 0 I 2
s Pantholops_hodgsonii.KE114653.1                          1268570 1 -   2937107 a
i Pantholops_hodgsonii.KE114653.1                        C 0 I 2
s Papio_anubis.CM001495.2                                183447495 1 + 183742232 a
i Papio_anubis.CM001495.2                                C 0 I 2
s Papio_cynocephalus.k141_4307930                            11145 1 +     20448 A
i Papio_cynocephalus.k141_4307930                        C 0 I 2
s Papio_hamadryas.Contig39                                20567953 1 +  20919399 a
i Papio_hamadryas.Contig39                               C 0 I 2
s Papio_kindae.k141_1936966                                   9899 1 +     41871 A
i Papio_kindae.k141_1936966                              C 0 I 2
s Papio_papio.k141_802527                                    13178 1 +     27711 A
i Papio_papio.k141_802527                                C 0 I 2
s Papio_ursinus.k141_5274964                                  4177 1 -     11374 A
i Papio_ursinus.k141_5274964                             C 0 I 2
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14686 1 -     78924 A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 2
s Phocoena_phocoena.PhoPho_flattened_line_24159              11238 1 +     63832 a
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 2
s Piliocolobus_badius.k141_1142974                            2524 1 +     68526 C
i Piliocolobus_badius.k141_1142974                       C 0 I 2
s Piliocolobus_gordonorum.k141_381342                        42665 1 +     89929 A
i Piliocolobus_gordonorum.k141_381342                    C 0 I 2
s Piliocolobus_kirkii.k141_448987                            44081 1 +     51399 A
i Piliocolobus_kirkii.k141_448987                        C 0 I 2
s Piliocolobus_tephrosceles.PDMG02000141.1                14300318 1 -  14605196 a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 2
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3975 1 +     22620 a
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 2
s Pithecia_albicans.k141_1476471                              6076 1 +     26961 a
i Pithecia_albicans.k141_1476471                         C 0 I 2
s Pithecia_chrysocephala.k141_839575                          2204 1 +     23417 a
i Pithecia_chrysocephala.k141_839575                     C 0 I 2
s Pithecia_hirsuta.k141_305604                                6068 1 +     29694 a
i Pithecia_hirsuta.k141_305604                           C 0 I 2
s Pithecia_mittermeieri.k141_446740                          31094 1 +     52772 a
i Pithecia_mittermeieri.k141_446740                      C 0 I 2
s Pithecia_pissinattii.k141_1824269                           6090 1 +     26198 a
i Pithecia_pissinattii.k141_1824269                      C 0 I 2
s Pithecia_pithecia.tarseq_165                             3942621 1 +   4542175 a
i Pithecia_pithecia.tarseq_165                           C 0 I 2
s Pithecia_vanzolinii.k141_1697688                            6054 1 -     23490 a
i Pithecia_vanzolinii.k141_1697688                       C 0 I 2
s Platanista_gangetica.PlaMin_flattened_line_173610            544 1 +      7680 a
i Platanista_gangetica.PlaMin_flattened_line_173610      C 0 I 2
s Plecturocebus_bernhardi.k141_2549090                       10315 1 -     39866 a
i Plecturocebus_bernhardi.k141_2549090                   C 0 I 4
s Plecturocebus_brunneus.k141_1495506                        19479 1 +     34906 a
i Plecturocebus_brunneus.k141_1495506                    C 0 I 4
s Plecturocebus_caligatus.k141_1382851                       23741 1 +     87950 a
i Plecturocebus_caligatus.k141_1382851                   C 0 I 4
s Plecturocebus_cinerascens.k141_1164729                     24571 1 +     88961 a
i Plecturocebus_cinerascens.k141_1164729                 C 0 I 3
s Plecturocebus_cupreus.k141_2351393                         10238 1 +     39403 a
i Plecturocebus_cupreus.k141_2351393                     C 0 I 4
s Plecturocebus_dubius.k141_1058799                          24021 1 -     87928 a
i Plecturocebus_dubius.k141_1058799                      C 0 I 4
s Plecturocebus_grovesi.k141_2013005                         30982 1 +     60166 a
i Plecturocebus_grovesi.k141_2013005                     C 0 I 4
s Plecturocebus_hoffmannsi.k141_3303950                      31178 1 +     67232 a
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 I 4
s Plecturocebus_miltoni.k141_349282                          26652 1 +     90634 a
i Plecturocebus_miltoni.k141_349282                      C 0 I 3
s Plecturocebus_moloch.k141_1031110                          24024 1 -     89403 a
i Plecturocebus_moloch.k141_1031110                      C 0 I 4
s Pongo_abelii.CM009266.2                                189135422 1 + 189387572 a
i Pongo_abelii.CM009266.2                                C 0 I 6
s Pongo_pygmaeus.ctg66                                     9575032 1 +   9816681 A
i Pongo_pygmaeus.ctg66                                   C 0 I 6
s Presbytis_comata.k141_677006                               77599 1 -     81375 a
i Presbytis_comata.k141_677006                           C 0 I 2
s Presbytis_mitrata.k141_1087752                              9430 1 +     19060 a
i Presbytis_mitrata.k141_1087752                         C 0 I 2
s Psammomys_obesus.NESX01036370.1                            13234 1 -     21651 A
i Psammomys_obesus.NESX01036370.1                        C 0 I 2
s Pteronotus_parnellii.KE909381.1                            16886 1 -     21811 A
i Pteronotus_parnellii.KE909381.1                        C 0 I 2
s Pteropus_alecto.KB030862.1                              22978945 1 +  28871421 a
i Pteropus_alecto.KB030862.1                             C 0 I 2
s Pteropus_vampyrus.KN525825.1                             1361930 1 +   4952924 A
i Pteropus_vampyrus.KN525825.1                           C 0 I 2
s Puma_concolor.QAVW01001104.1                            20276444 1 -  38429054 a
i Puma_concolor.QAVW01001104.1                           C 0 I 2
s Pygathrix_cinerea.k141_1153803                             19409 1 -     91421 A
i Pygathrix_cinerea.k141_1153803                         C 0 I 19
s Pygathrix_nigripes_b.ctg100                                 7613532 1 +   7812017 A
i Pygathrix_nigripes_b.ctg100                               C 0 I 8
s Pygathrix_nigripes_a.k141_215492                             19439 1 -     72585 A
i Pygathrix_nigripes_a.k141_215492                         C 0 I 8
s Rangifer_tarandus.RanTarSib_scaffold_29737                  8687 1 +     55207 a
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 2
s Rattus_norvegicus.chr16                                 53573544 1 +  90668790 A
i Rattus_norvegicus.chr16                                C 0 I 2
s Rhinolophus_sinicus.LVEH01000134.1                        368993 1 -   3329780 a
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 2
s Rhinopithecus_bieti.k119_217274                            11106 1 -     11128 A
i Rhinopithecus_bieti.k119_217274                        C 0 N 0
s Rhinopithecus_roxellana.NC_044550.1                     91240472 1 - 195417433 a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 8
s Rhinopithecus_strykeri.ctg102                            7676121 1 +   7961872 A
i Rhinopithecus_strykeri.ctg102                          C 0 I 8
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                90019 1 -     96226 A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 2
s Saiga_tatarica.SaiTat_scaffold_133311                       1169 1 +      9503 a
i Saiga_tatarica.SaiTat_scaffold_133311                  C 0 I 2
s Scalopus_aquaticus.ScaAqu_scaffold_662                    155304 1 -    313613 A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 2
s Semnopithecus_entellus.k141_1672505                         4280 1 -     12572 A
i Semnopithecus_entellus.k141_1672505                    C 0 I 3
s Semnopithecus_hypoleucos.k141_1615806                      31132 1 +     39453 A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 I 3
s Semnopithecus_johnii.k141_670120                           11636 1 +     27826 A
i Semnopithecus_johnii.k141_670120                       C 0 I 3
s Semnopithecus_priam.k141_638794                            11181 1 -     19483 A
i Semnopithecus_priam.k141_638794                        C 0 I 3
s Semnopithecus_schistaceus.k141_1572284                      4479 1 -     12762 A
i Semnopithecus_schistaceus.k141_1572284                 C 0 I 3
s Semnopithecus_vetulus.k141_910252                           4324 1 +     13763 A
i Semnopithecus_vetulus.k141_910252                      C 0 I 3
s Sigmodon_hispidus.SigHis_scaffold_42075                     3141 1 -     30804 T
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 I 2
s Sorex_araneus.JH798187.1                                13653127 1 -  18376816 G
i Sorex_araneus.JH798187.1                               C 0 I 2
s Suricata_suricatta.SurSur_flattened_line_6629              20677 1 -    196729 A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 2
s Sus_scrofa.CM000828.4                                    6813816 1 +  69701581 a
i Sus_scrofa.CM000828.4                                  C 0 I 2
s Tadarida_brasiliensis.TadBra_scaffold_25820                13357 1 +     41958 a
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 2
s Tarsius_lariang.k141_2201908                               28231 1 +     70052 a
i Tarsius_lariang.k141_2201908                           C 0 I 2
s Tarsius_wallacei.k141_254427                                3028 1 -     16117 a
i Tarsius_wallacei.k141_254427                           C 0 I 2
s Theropithecus_gelada.CM009954.1                        186432803 1 + 186847797 a
i Theropithecus_gelada.CM009954.1                        C 0 I 2
s Tolypeutes_matacus.TolMat_scaffold_85600                    4550 1 +     18632 A
i Tolypeutes_matacus.TolMat_scaffold_85600               C 0 I 2
s Tonatia_saurophila.TonSau_scaffold_294                     83159 1 +    610378 a
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 2
s Trachypithecus_auratus.k141_722599                         15218 1 -     20410 A
i Trachypithecus_auratus.k141_722599                     C 0 I 2
s Trachypithecus_crepusculus.k141_582567                      4341 1 -     12674 A
i Trachypithecus_crepusculus.k141_582567                 C 0 I 2
s Trachypithecus_cristatus.k141_580354                       15326 1 +     19930 A
i Trachypithecus_cristatus.k141_580354                   C 0 I 2
s Trachypithecus_francoisi.k141_1412647                      11728 1 -     19997 A
i Trachypithecus_francoisi.k141_1412647                  C 0 I 2
s Trachypithecus_geei.k141_277701                            51869 1 -     60166 A
i Trachypithecus_geei.k141_277701                        C 0 I 3
s Trachypithecus_germaini.k141_912491                        19332 1 -     27529 A
i Trachypithecus_germaini.k141_912491                    C 0 I 2
s Trachypithecus_hatinhensis.k141_17719                        964 1 +      9229 A
i Trachypithecus_hatinhensis.k141_17719                  C 0 I 2
s Trachypithecus_laotum.k141_907409                          12866 1 -     21137 A
i Trachypithecus_laotum.k141_907409                      C 0 I 2
s Trachypithecus_leucocephalus.k141_101510                     966 1 +      9131 A
i Trachypithecus_leucocephalus.k141_101510               C 0 I 2
s Trachypithecus_melamera.k141_105182                          930 1 -      3730 A
i Trachypithecus_melamera.k141_105182                    C 0 I 3
s Trachypithecus_obscurus.k141_190785                        29198 1 +     32220 A
i Trachypithecus_obscurus.k141_190785                    C 0 I 3
s Trachypithecus_phayrei.ctg124                            5943295 1 +   6242583 A
i Trachypithecus_phayrei.ctg124                          C 0 I 2
s Trachypithecus_pileatus.k141_2007326                       12547 1 +     20839 a
i Trachypithecus_pileatus.k141_2007326                   C 0 I 3
s Tupaia_chinensis.KB320699.1                              2159211 1 +   4065304 A
i Tupaia_chinensis.KB320699.1                            C 0 I 3
s Tupaia_tana.TupTan_flattened_line_306982                    1625 1 -      4186 A
i Tupaia_tana.TupTan_flattened_line_306982               C 0 I 2
s Tursiops_truncatus.MRVK01000835.1                       15740422 1 +  33153633 a
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 2
s Uropsilus_gracilis.UroGra_scaffold_12083                   55380 1 -     77625 A
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 2
s Vicugna_pacos.KN270157.1                                 5374079 1 -   5488506 a
i Vicugna_pacos.KN270157.1                               C 0 I 2
s Xerus_inauris.XerIna_scaffold_2302                          3264 1 +    224448 a
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 2
s Zapus_hudsonius.ZapHud_scaffold_11398                      16802 1 +     63895 A
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 2
s Ziphius_cavirostris.ZipCav_flattened_line_761354             727 1 -      1267 A
i Ziphius_cavirostris.ZipCav_flattened_line_761354       C 0 I 2
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202 0 +      8798 C
e Galago_senegalensis.k141_631886                             7400 0 +     11339 C
e Galago_moholi.ctg2040                                     429710 0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964 2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445 0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734 0 -     33856 C
e Perodicticus_potto.k141_1186926                              597 0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219 0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 12841 537 -     43706 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_40725                    2573 51 +     27266 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              107540 0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    389823 643 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      121344 643 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Spermophilus_dauricus.KZ294078.1                         1956222 0 -   3870691 C
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Petromus_typicus.PetTyp_scaffold_221660                      871 0 -      2102 C
e Peromyscus_maniculatus.KI615324.1                       18214100 8 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pan_paniscus.KQ411613.1                                    48411 14 +     80009 I
e Otocyon_megalotis.JAEUCK010005147.1                       464401 867 -    559221 I
e Oryctolagus_cuniculus.CM000791.1                        67149665 1414 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Octodon_degus.JH651603.1                                  749928 0 +  11899542 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869 0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414 0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947 0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9151314 530 -   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     73439 0 -     80779 C
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Mungos_mungo.MunMun_flattened_line_23663                   36398 7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184611 154 -  29670104 I
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Manis_pentadactyla.KN006162.1                              53022 987 -    317179 I
e Manis_javanica.JSZB01003497.1                              20877 990 +    737560 I
e Lycaon_pictus.CM007581.1                                17957377 535 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     8427 743 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Jaculus_jaculus.JH725527.1                               8278673 121 -   9596543 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7523065 0 -   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                      85084 0 +    135385 C
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23782 0 -    143317 C
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20664158 0 +  22651954 C
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689 0 +     41679 C
e Fukomys_damarensis.KN121974.1                             852512 0 +   3816255 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               35993 651 +    498745 I
e Equus_caballus.CM000403.2                               18533964 651 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1286155 651 +   4378816 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 35526 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    38384 0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    8624 649 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  675871 642 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasyprocta_punctata.DasPun_flattened_line_15900             2011 0 -     75252 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  38182 0 +     51376 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11668671 0 + 224834208 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chlorocebus_pygerythrus.k141_1025673                       19290 2 -     50209 I
e Chlorocebus_aethiops.ctg25                              18432793 2 -  18827391 I
e Chinchilla_lanigera.JH722012.1                           1254902 0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Cercopithecus_neglectus.k141_2526306                       44093 2 -     53127 I
e Cercopithecus_hamlyni.k141_187466                          18867 6 -     27936 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5047 647 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                       102948 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18364066 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18351806 0 -  23392119 C
e Capromys_pilorides.CapPil_scaffold_65020                    3253 0 -     12242 C
e Canis_lupus_orion.HG994398.1                            18502439 535 +  63665305 I
e Canis_lupus_familiaris.chr16                            17961137 535 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9036666 537 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     1966 535 -     43241 I
e CanFam4.chr16                                           17801223 537 -  60362399 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538 0 +      5281 C
e Allactaga_bullata.AllBul_scaffold_9566                     75924 121 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T

a score=0.000000
s hg38.chrUn_KI270753v1                                      11077 11 +     62944 TATA-TATAATT
s Gorilla_beringei.k141_2066350                                468 10 +      1742 TATA-TAT-ATA
i Gorilla_beringei.k141_2066350                          I 9 I 134
s Gorilla_gorilla.CYUI03001204.1                             17896 10 -     63219 tata-tat-ata
i Gorilla_gorilla.CYUI03001204.1                         I 7 I 134
s Hoolock_leuconedys.ctg274                                    439125 10 +    630532 TATA-TAT-ATA
i Hoolock_leuconedys.ctg274                                 I 6 C 0
s Pan_paniscus.KQ411613.1                                    48425 11 +     80009 tata-tataata
i Pan_paniscus.KQ411613.1                                I 14 C 0
s Pan_troglodytes.NBAG03001836.1                             34353 11 +     51860 tata-tataata
i Pan_troglodytes.NBAG03001836.1                         I 9 I 332
s Pongo_abelii.CM009266.2                                189135429 10 + 189387572 tata-tat-aca
i Pongo_abelii.CM009266.2                                I 6 I 15
s Pongo_pygmaeus.ctg66                                     9575039 10 +   9816681 TATA-TAT-ACA
i Pongo_pygmaeus.ctg66                                   I 6 I 15
e Cheracebus_torquatus.k141_1170026                          64195  2 +     76511 I
e Cheracebus_regulus.k141_471822                            159726  2 -    216457 I
e Cheracebus_lugens.k141_1393925                              2159  2 +     17877 I
e Cheracebus_lucifer.k141_49986                               2283  2 -     17098 I
e Plecturocebus_moloch.k141_1031110                          24025  4 -     89403 I
e Plecturocebus_miltoni.k141_349282                          26653  3 +     90634 I
e Plecturocebus_hoffmannsi.k141_3303950                      31179  4 +     67232 I
e Plecturocebus_grovesi.k141_2013005                         30983  4 +     60166 I
e Plecturocebus_dubius.k141_1058799                          24022  4 -     87928 I
e Plecturocebus_cupreus.k141_2351393                         10239  4 +     39403 I
e Plecturocebus_cinerascens.k141_1164729                     24572  3 +     88961 I
e Plecturocebus_caligatus.k141_1382851                       23742  4 +     87950 I
e Plecturocebus_brunneus.k141_1495506                        19480  4 +     34906 I
e Plecturocebus_bernhardi.k141_2549090                       10316  4 -     39866 I
e Pithecia_vanzolinii.k141_1697688                            6055  2 -     23490 I
e Pithecia_pithecia.tarseq_165                             3942622  2 +   4542175 I
e Pithecia_pissinattii.k141_1824269                           6091  2 +     26198 I
e Pithecia_mittermeieri.k141_446740                          31095  2 +     52772 I
e Pithecia_hirsuta.k141_305604                                6069  2 +     29694 I
e Pithecia_chrysocephala.k141_839575                          2205  2 +     23417 I
e Pithecia_albicans.k141_1476471                              6077  2 +     26961 I
e Lagothrix_lagothricha.k141_1005387                         16862  2 -     38430 I
e Chiropotes_sagulatus.k141_1421488                          32613  2 -     50570 I
e Chiropotes_israelita.k141_747660                          100806  2 +    146308 I
e Cacajao_melanocephalus.k141_619699                         56463  2 -    119600 I
e Cacajao_hosomi.k141_81245                                  32362  2 -     95584 I
e Cacajao_calvus.k141_5142                                   63180  2 +     81800 I
e Cacajao_ayresi.k141_552049                                103677  2 -    122966 I
e Ateles_paniscus.k141_457735                                22705  2 +     72325 I
e Ateles_marginatus.k141_803263                              14817  2 -     40414 I
e Ateles_geoffroyi_a.k141_833924                               10435  2 -     89868 I
e Ateles_chamek.k141_1806455                                 28660  2 -     30947 I
e Ateles_belzebuth.k141_445860                               45859  2 -     48001 I
e Ateles_geoffroyi_b.tarseq_1536                             21211060  2 -  21539123 I
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Alouatta_seniculus.k141_117119                             17818  2 +     50774 I
e Alouatta_puruensis.k141_362188                              3367  2 +      5663 I
e Alouatta_palliata.k141_2135620                              6862  2 +     47717 I
e Alouatta_nigerrima.k141_1929159                             2645  2 +     30492 I
e Alouatta_macconnelli.k141_918386                            3687  2 -      9457 I
e Alouatta_juara.k141_1302312                                 2599  2 +     27940 I
e Alouatta_discolor.k141_566626                              14127  2 +     28687 I
e Alouatta_caraya.k141_1701091                                3674  2 -     36483 I
e Alouatta_belzebul.k141_3560514                             10567  2 +     51355 I
e Mus_pahari.LT608297.1                                   31358183  2 -  89631738 I
e Mus_spretus.CM004101.1                                  90755948  2 - 130317789 I
e Mus_musculus.chr8                                       87653458  2 - 129401213 I
e Mus_caroli.LT608237.1                                   84363958  2 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Ziphius_cavirostris.ZipCav_flattened_line_761354             728  2 -      1267 I
e Zapus_hudsonius.ZapHud_scaffold_11398                      16803  2 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Xerus_inauris.XerIna_scaffold_2302                          3265  2 +    224448 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 12841 537 -     43706 I
e Vicugna_pacos.KN270157.1                                 5374080  2 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Uropsilus_gracilis.UroGra_scaffold_12083                   55381  2 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15740423  2 +  33153633 I
e Tupaia_tana.TupTan_flattened_line_306982                    1626  2 -      4186 I
e Tupaia_chinensis.KB320699.1                              2159212  3 +   4065304 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_40725                    2573 51 +     27266 I
e Trachypithecus_pileatus.k141_2007326                       12548  3 +     20839 I
e Trachypithecus_phayrei.ctg124                            5943296  2 +   6242583 I
e Trachypithecus_obscurus.k141_190785                        29199  3 +     32220 I
e Trachypithecus_melamera.k141_105182                          931  3 -      3730 I
e Trachypithecus_leucocephalus.k141_101510                     967  2 +      9131 I
e Trachypithecus_laotum.k141_907409                          12867  2 -     21137 I
e Trachypithecus_hatinhensis.k141_17719                        965  2 +      9229 I
e Trachypithecus_germaini.k141_912491                        19333  2 -     27529 I
e Trachypithecus_geei.k141_277701                            51870  3 -     60166 I
e Trachypithecus_francoisi.k141_1412647                      11729  2 -     19997 I
e Trachypithecus_cristatus.k141_580354                       15327  2 +     19930 I
e Trachypithecus_crepusculus.k141_582567                      4342  2 -     12674 I
e Trachypithecus_auratus.k141_722599                         15219  2 -     20410 I
e Tonatia_saurophila.TonSau_scaffold_294                     83160  2 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_85600                    4551  2 +     18632 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              107540  0 +    114563 C
e Theropithecus_gelada.CM009954.1                        186432804  2 + 186847797 I
e Tarsius_wallacei.k141_254427                                3029  2 -     16117 I
e Tarsius_lariang.k141_2201908                               28232  2 +     70052 I
e Tapirus_terrestris.TapTer_scaffold_755                    389823 643 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      121344 643 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                13358  2 +     41958 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6813817  2 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629              20678  2 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Spermophilus_dauricus.KZ294078.1                         1956222  0 -   3870691 C
e Sorex_araneus.JH798187.1                                13653128  2 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_42075                     3142  2 -     30804 I
e Semnopithecus_vetulus.k141_910252                           4325  3 +     13763 I
e Semnopithecus_schistaceus.k141_1572284                      4480  3 -     12762 I
e Semnopithecus_priam.k141_638794                            11182  3 -     19483 I
e Semnopithecus_johnii.k141_670120                           11637  3 +     27826 I
e Semnopithecus_hypoleucos.k141_1615806                      31133  3 +     39453 I
e Semnopithecus_entellus.k141_1672505                         4281  3 -     12572 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    155305  2 -    313613 I
e Saiga_tatarica.SaiTat_scaffold_133311                       1170  2 +      9503 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                90020  2 -     96226 I
e Rhinopithecus_strykeri.ctg102                            7676122  8 +   7961872 I
e Rhinopithecus_roxellana.NC_044550.1                     91240473  8 - 195417433 I
e Rhinolophus_sinicus.LVEH01000134.1                        368994  2 -   3329780 I
e Rattus_norvegicus.chr16                                 53573545  2 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  8688  2 +     55207 I
e Pygathrix_nigripes_a.k141_215492                             19440  8 -     72585 I
e Pygathrix_nigripes_b.ctg100                                 7613533  8 +   7812017 I
e Pygathrix_cinerea.k141_1153803                             19410 19 -     91421 I
e Puma_concolor.QAVW01001104.1                            20276445  2 -  38429054 I
e Pteropus_vampyrus.KN525825.1                             1361931  2 +   4952924 I
e Pteropus_alecto.KB030862.1                              22978946  2 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Pteronotus_parnellii.KE909381.1                            16887  2 -     21811 I
e Psammomys_obesus.NESX01036370.1                            13235  2 -     21651 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Presbytis_mitrata.k141_1087752                              9431  2 +     19060 I
e Presbytis_comata.k141_677006                               77600  2 -     81375 I
e Platanista_gangetica.PlaMin_flattened_line_173610            545  2 +      7680 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             3976  2 +     22620 I
e Piliocolobus_tephrosceles.PDMG02000141.1                14300319  2 -  14605196 I
e Piliocolobus_kirkii.k141_448987                            44082  2 +     51399 I
e Piliocolobus_gordonorum.k141_381342                        42666  2 +     89929 I
e Piliocolobus_badius.k141_1142974                            2525  2 +     68526 I
e Phocoena_phocoena.PhoPho_flattened_line_24159              11239  2 +     63832 I
e Petromus_typicus.PetTyp_scaffold_221660                      871  0 -      2102 C
e Peromyscus_maniculatus.KI615324.1                       18214100  8 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14687  2 -     78924 I
e Papio_ursinus.k141_5274964                                  4178  2 -     11374 I
e Papio_papio.k141_802527                                    13179  2 +     27711 I
e Papio_kindae.k141_1936966                                   9900  2 +     41871 I
e Papio_hamadryas.Contig39                                20567954  2 +  20919399 I
e Papio_cynocephalus.k141_4307930                            11146  2 +     20448 I
e Papio_anubis.CM001495.2                                183447496  2 + 183742232 I
e Pantholops_hodgsonii.KE114653.1                          1268571  2 -   2937107 I
e Panthera_tigris.KE722367.1                               4723382  2 -   8748460 I
e Panthera_pardus.KV860321.1                                266557  2 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  153246  2 +    230217 I
e Ovis_canadensis.OviCan_scaffold_2572                      177838  2 -    191736 I
e Ovis_aries.CM001607.2                                   17589636  2 +  44047080 I
e Otocyon_megalotis.JAEUCK010005147.1                       464401 867 -    559221 I
e Oryctolagus_cuniculus.CM000791.1                        67149665 1414 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Orcinus_orca.KB316932.1                                  2784170  2 -  10937097 I
e Onychomys_torridus.OnyTor_scaffold_2986                    83365  2 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_7387                      440  2 +    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          80966  2 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         146853  2 +    630418 I
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Octodon_degus.JH651603.1                                  749928  0 +  11899542 C
e Ochotona_princeps.JH802162.1                             1367081  2 +   3988456 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9151314 530 -   9404916 I
e Noctilio_leporinus.NocLep_scaffold_251                    759592  5 +    783361 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5868277  2 +   7148211 I
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Nasalis_larvatus.k141_413338                               19419  2 +     21681 I
e Nannospalax_galili.KL204518.1                            3931312  7 -   9623020 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_44643                          639  2 +     25416 I
e Myotis_lucifugus.GL429869.1                              3906337  2 -   4330536 I
e Myotis_davidii.KB100139.1                                1590225  2 -   6019432 I
e Myotis_brandtii.KE162005.1                                282907  2 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     73439  0 -     80779 C
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Muscardinus_avellanarius.MusAve_scaffold_82313              6929  3 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           9158  2 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   3332  2 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 143404  2 -    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                    29314  2 -    437263 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Miopithecus_ogouensis.k141_534055                          13371  2 -     28506 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             36093  2 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1852409  2 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                17815  2 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    5573  2 +     10310 I
e Mesocricetus_auratus.KB708134.1                         12184611 154 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 35602  2 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Megaderma_lyra.MegLyr_scaffold_4542                        15396  2 -    207569 I
e Marmota_marmota.CZRN01000018.1                          33105383  2 -  40650429 I
e Manis_pentadactyla.KN006162.1                              53022 987 -    317179 I
e Manis_javanica.JSZB01003497.1                              20877 990 +    737560 I
e Mandrillus_sphinx.Contig270                               355807  2 +    752769 I
e Mandrillus_leucophaeus.scaffold280                      23941692  2 -  24302211 I
e Macroglossus_sobrinus.MacSob_scaffold_8222                 92860  2 +     94391 I
e Macaca_tonkeana.k141_1498238                               30106  2 -     45290 I
e Macaca_thibetana.k99_256239                                 9473  2 -     24072 I
e Macaca_silenus.Contig273                                  334025  2 -    668171 I
e Macaca_siberu.k141_635500                                  11163  2 -     14993 I
e Macaca_radiata.k141_3680011                                11364  2 +     20474 I
e Macaca_nigra.k141_1655396                                  84373  4 +     89720 I
e Macaca_nemestrina.KQ007038.1                            25462172  2 -  25927173 I
e Macaca_mulatta.NC_041758.1                             186843592  2 + 187317192 I
e Macaca_maura.k141_2733130                                  28517  2 +     37952 I
e Macaca_leonina.k141_3550399                                19939  2 -     29190 I
e Macaca_fuscata.k119_255327                                 10473  2 -     23192 I
e Macaca_fascicularis.k141_814140                            84782  4 -    114318 I
e Macaca_cyclopis.k119_18836                                 17006  2 -     26193 I
e Macaca_assamensis.Contig5                               59680489  2 +  60120075 I
e Macaca_arctoides.k141_2326796                              11235  2 +     40492 I
e Lycaon_pictus.CM007581.1                                17957377 535 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lophocebus_aterrimus.ctg367                              1441423  2 +   1826925 I
e Lipotes_vexillifer.KE559953.1                             270190  2 -    662738 I
e Lepus_americanus.LepAme_scaffold_107385                     8427 743 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Lasiurus_borealis.LasBor_scaffold_32767                    18909  2 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_81059                  881  2 -     18011 I
e Jaculus_jaculus.JH725527.1                               8278673 121 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_34779                1135  2 -     31341 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7523065  0 -   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                      85084  0 +    135385 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23782  0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  47166  2 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_101188               1104  2 +      9903 I
e Hipposideros_armiger.JXIK01000431.1                       112532  2 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112788  2 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20664158  0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 21885  2 +     36099 I
e Helogale_parvula.HelPar_flattened_line_2585               244418  2 +    327341 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Graphiurus_murinus.GraMur_scaffold_10447                   35456  2 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            33451  2 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     611286  2 -    660261 I
e Galeopterus_variegatus.GalVar_scaffold_108840               4759  2 -      9135 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Fukomys_damarensis.KN121974.1                             852512  0 +   3816255 C
e Felis_nigripes.FelNig_flattened_line_20823                 11710  2 -     36744 I
e Felis_catus_fca126.CM031415.1                           20198050  2 + 205367284 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Eubalaena_japonica.EubJap_flattened_line_31514             27304  2 -     44125 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           13358  2 +    133382 I
e Erythrocebus_patas.Contig38                             21209467  2 -  21539334 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               35993 651 +    498745 I
e Equus_caballus.CM000403.2                               18533964 651 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1286155 651 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2149203  2 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Ellobius_talpinus.LOJH01081419.1                            3266  2 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          23345  2 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       314051  2 +    607251 I
e Eidolon_helvum.AWHC01278734.1                                740  2 +      2334 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 35526  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    38384  0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    8624 649 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  675871 642 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8632068  2 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16813929  2 +  35494412 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            69498  2 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_15900             2011  0 -     75252 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  38182  0 +     51376 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             30610  2 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_1059839               21  2 +      1008 I
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_18520                 52817  2 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           2490  2 +     23735 I
e Condylura_cristata.JH655891.1                           17550990  2 -  53390261 I
e Colobus_polykomos.k141_906115                              41373  2 +     84244 I
e Colobus_guereza.LG01                                   199953064  2 + 200372422 I
e Colobus_angolensis.KN981557.1                            1914816  2 +   2368649 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chlorocebus_sabaeus.CM001947.1                         135426296  2 + 135778131 I
e Chlorocebus_pygerythrus.k141_1025673                       19290  2 -     50209 I
e Chlorocebus_aethiops.ctg25                              18432793  2 -  18827391 I
e Chinchilla_lanigera.JH722012.1                           1254902  0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            6477  2 -      8501 I
e Cercopithecus_roloway.k141_2581234                          4925  6 +     14005 I
e Cercopithecus_pogonias.k141_2303387                         1916  2 +     10558 I
e Cercopithecus_petaurista.k141_807961                       18891  2 -     27947 I
e Cercopithecus_nictitans.k141_1119862                        4345  2 +     13442 I
e Cercopithecus_neglectus.k141_2526306                       44093  2 -     53127 I
e Cercopithecus_mona.ctg39                                21226976  2 -  21565898 I
e Cercopithecus_albogularis.ctg5                                38827468  2 +  39242232 I
e Cercopithecus_lowei.k141_1854285                            7744  2 -     17152 I
e Cercopithecus_hamlyni.k141_187466                          18867  6 -     27936 I
e Cercopithecus_diana.k141_1150327                           10958  4 -     20078 I
e Cercopithecus_cephus.k141_1078548                          16198  2 +     29689 I
e Cercopithecus_ascanius.k141_1024104                        13222  2 -     20310 I
e Cercocebus_torquatus.k141_3057011                          13065  2 +     27781 I
e Cercocebus_lunulatus.k141_3342297                           4967  2 -     14043 I
e Cercocebus_chrysogaster.k141_1540778                        4377  2 +     17872 I
e Cercocebus_atys.KQ010504.1                               4479878  2 +   4669795 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5047 647 -     25243 I
e Cephalopachus_bancanus.k141_1423433                         7233  4 +     31688 I
e Cavia_tschudii.CavTsc_scaffold_8919                       102948  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18364066  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18351806  0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     96232  2 +    217609 I
e Castor_canadensis.CasCan_scaffold_2074                    139353  2 +    179628 I
e Carollia_perspicillata.CarPer_scaffold_92756                7068  2 -     11696 I
e Carlito_syrichta.NW_007259797.1                           157736  4 -    496798 I
e Capromys_pilorides.CapPil_scaffold_65020                    3253  0 -     12242 C
e Capra_hircus.CM004588.1                                 18064397  2 -  44709034 I
e Capra_aegagrus.CM003241.1                               18833580  2 +  46296322 I
e Canis_lupus_orion.HG994398.1                            18502439 535 +  63665305 I
e Canis_lupus_familiaris.chr16                            17961137 535 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9036666 537 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     1966 535 -     43241 I
e CanFam4.chr16                                           17801223 537 -  60362399 I
e Camelus_ferus.KB017975.1                                  405334  2 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2337036  2 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10004564  2 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2823108  2 +   4408762 I
e Bos_taurus.CM000203.6                                   18087155  2 +  45695690 I
e Bos_mutus.JH880303.1                                     1129071  2 -   1948126 I
e Bos_indicus.CM003047.1                                  20276517  2 +  48749331 I
e Bison_bison.KN261452.1                                    203278  2 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    30666  2 +     34529 I
e Balaenoptera_bonaerensis.DF707048.1                         4511  2 -     18090 I
e Balaenoptera_acutorostrata.KI537508.1                   15194046  2 +  23207421 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6724  2 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      14777  2 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_43303               849  2 -     32520 I
e Anoura_caudifer.AnoCau_scaffold_1412                      187313  2 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          679570  2 -   2318259 I
e Allochrocebus_solatus.k141_166128                          10210  2 -     12518 I
e Allochrocebus_preussi.k141_1442296                          9357  2 -     18505 I
e Allochrocebus_lhoesti.k141_4309873                         18862  2 -     28001 I
e Allenopithecus_nigroviridis.k141_3361533                   18926  2 -     52922 I
e Allactaga_bullata.AllBul_scaffold_9566                     75924 121 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T
e Acomys_cahirinus.AcoCah_scaffold_12655                     73574  2 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           829431  2 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      11088 12 +     62944 ATTATTATT------A----T------------T
s Acinonyx_jubatus.LLWD01001279.1                           829433  4 -   1699592 --------c------c----t------------t
i Acinonyx_jubatus.LLWD01001279.1                        I 2 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     73576  4 +     87051 --------C------C----C------------T
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 2 I 1
s Allenopithecus_nigroviridis.k141_3361533                   18928  7 -     52922 --------T------A----TATA---------T
i Allenopithecus_nigroviridis.k141_3361533               I 2 C 0
s Allochrocebus_lhoesti.k141_4309873                         18864  7 -     28001 --------T------A----TATA---------T
i Allochrocebus_lhoesti.k141_4309873                     I 2 C 0
s Allochrocebus_preussi.k141_1442296                          9359  7 -     18505 --------T------A----TATA---------T
i Allochrocebus_preussi.k141_1442296                     I 2 C 0
s Allochrocebus_solatus.k141_166128                          10212  7 -     12518 --------T------A----TATA---------T
i Allochrocebus_solatus.k141_166128                      I 2 C 0
s Alouatta_belzebul.k141_3560514                             10569  6 +     51355 --------aa-a---a----T------------T
i Alouatta_belzebul.k141_3560514                         I 2 C 0
s Alouatta_caraya.k141_1701091                                3676  6 -     36483 --------aa-a---a----T------------T
i Alouatta_caraya.k141_1701091                           I 2 C 0
s Alouatta_discolor.k141_566626                              14129  6 +     28687 --------aa-a---a----T------------T
i Alouatta_discolor.k141_566626                          I 2 C 0
s Alouatta_juara.k141_1302312                                 2601  6 +     27940 --------aa-a---a----T------------T
i Alouatta_juara.k141_1302312                            I 2 C 0
s Alouatta_macconnelli.k141_918386                            3689  6 -      9457 --------aa-a---a----T------------T
i Alouatta_macconnelli.k141_918386                       I 2 C 0
s Alouatta_nigerrima.k141_1929159                             2647  6 +     30492 --------aa-a---a----T------------T
i Alouatta_nigerrima.k141_1929159                        I 2 C 0
s Alouatta_palliata.k141_2135620                              6864  6 +     47717 --------aa-a---a----T------------T
i Alouatta_palliata.k141_2135620                         I 2 C 0
s Alouatta_puruensis.k141_362188                              3369  6 +      5663 --------aa-a---a----T------------T
i Alouatta_puruensis.k141_362188                         I 2 C 0
s Alouatta_seniculus.k141_117119                             17820  6 +     50774 --------aa-a---a----T------------T
i Alouatta_seniculus.k141_117119                         I 2 C 0
s Ammotragus_lervia.NIVO01071767.1                          679572  4 -   2318259 --------c------c----t------------t
i Ammotragus_lervia.NIVO01071767.1                       I 2 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      187315  4 +    412891 --------C------C----T------------T
i Anoura_caudifer.AnoCau_scaffold_1412                   I 2 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303               851  4 -     32520 --------C------C----T------------T
i Antilocapra_americana.AntAmePen_scaffold_43303         I 2 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      14779  4 +     20879 --------A------C----C------------A
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 2 I 1
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6726  4 +     43469 --------C------C----T------------T
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 2 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21211062  5 -  21539123 --------a----TTA----T-------------
i Ateles_geoffroyi_b.tarseq_1536                            I 2 C 0
s Ateles_belzebuth.k141_445860                               45861  5 -     48001 --------a----TTA----T-------------
i Ateles_belzebuth.k141_445860                           I 2 C 0
s Ateles_chamek.k141_1806455                                 28662  5 -     30947 --------a----TTA----T-------------
i Ateles_chamek.k141_1806455                             I 2 C 0
s Ateles_geoffroyi_a.k141_833924                               10437  5 -     89868 --------a----TTA----T-------------
i Ateles_geoffroyi_a.k141_833924                           I 2 C 0
s Ateles_marginatus.k141_803263                              14819  5 -     40414 --------a----TTA----T-------------
i Ateles_marginatus.k141_803263                          I 2 C 0
s Ateles_paniscus.k141_457735                                22707  5 +     72325 --------a----TTA----T-------------
i Ateles_paniscus.k141_457735                            I 2 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15194048  4 +  23207421 --------c------c----t------------t
i Balaenoptera_acutorostrata.KI537508.1                  I 2 C 0
s Balaenoptera_bonaerensis.DF707048.1                         4513  4 -     18090 --------c------c----t------------t
i Balaenoptera_bonaerensis.DF707048.1                    I 2 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    30668  4 +     34529 --------C------C----T------------T
i Beatragus_hunteri.BeaHun_scaffold_50177                I 2 C 0
s Bison_bison.KN261452.1                                    203280  4 -    288883 --------C------C----T------------T
i Bison_bison.KN261452.1                                 I 2 C 0
s Bos_indicus.CM003047.1                                  20276519  4 +  48749331 --------c------c----t------------t
i Bos_indicus.CM003047.1                                 I 2 C 0
s Bos_mutus.JH880303.1                                     1129073  4 -   1948126 --------c------c----t------------t
i Bos_mutus.JH880303.1                                   I 2 C 0
s Bos_taurus.CM000203.6                                   18087157  4 +  45695690 --------c------c----t------------t
i Bos_taurus.CM000203.6                                  I 2 C 0
s Bubalus_bubalis.KI419123.1                               2823110  4 +   4408762 --------a------c----t------------t
i Bubalus_bubalis.KI419123.1                             I 2 C 0
s Cacajao_ayresi.k141_552049                                103679  7 -    122966 --------T---ATTA----T------------T
i Cacajao_ayresi.k141_552049                             I 2 C 0
s Cacajao_calvus.k141_5142                                   63182  7 +     81800 --------T---ATTA----T------------T
i Cacajao_calvus.k141_5142                               I 2 C 0
s Cacajao_hosomi.k141_81245                                  32364  7 -     95584 --------T---ATTA----T------------T
i Cacajao_hosomi.k141_81245                              I 2 C 0
s Cacajao_melanocephalus.k141_619699                         56465  7 -    119600 --------T---ATTA----T------------T
i Cacajao_melanocephalus.k141_619699                     I 2 C 0
s Camelus_bactrianus.KN276810.1                           10004566  4 -  17673402 --------c------c----t------------t
i Camelus_bactrianus.KN276810.1                          I 2 C 0
s Camelus_dromedarius.KN272107.1                           2337038  4 -   7040546 --------c------c----t------------t
i Camelus_dromedarius.KN272107.1                         I 2 C 0
s Camelus_ferus.KB017975.1                                  405336  4 -   1652518 --------c------c----t------------t
i Camelus_ferus.KB017975.1                               I 2 C 0
s Capra_aegagrus.CM003241.1                               18833582  4 +  46296322 --------C------C----T------------T
i Capra_aegagrus.CM003241.1                              I 2 C 0
s Capra_hircus.CM004588.1                                 18064399  4 -  44709034 --------c------c----t------------t
i Capra_hircus.CM004588.1                                I 2 C 0
s Carlito_syrichta.NW_007259797.1                           157740  4 -    496798 --------a------a----a------------g
i Carlito_syrichta.NW_007259797.1                        I 4 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                7070  4 -     11696 --------C------C----T------------T
i Carollia_perspicillata.CarPer_scaffold_92756           I 2 C 0
s Castor_canadensis.CasCan_scaffold_2074                    139355  4 +    179628 --------C------T----A------------C
i Castor_canadensis.CasCan_scaffold_2074                 I 2 I 1
s Catagonus_wagneri.CatWag_scaffold_2839                     96234  4 +    217609 --------c------c----t------------t
i Catagonus_wagneri.CatWag_scaffold_2839                 I 2 C 0
s Cephalopachus_bancanus.k141_1423433                         7237  4 +     31688 --------a------a----a------------g
i Cephalopachus_bancanus.k141_1423433                    I 4 C 0
s Cercocebus_atys.KQ010504.1                               4479880  7 +   4669795 --------t------a----t---------atat
i Cercocebus_atys.KQ010504.1                             I 2 C 0
s Cercocebus_chrysogaster.k141_1540778                        4379  7 +     17872 --------T------A----TATA---------T
i Cercocebus_chrysogaster.k141_1540778                   I 2 C 0
s Cercocebus_lunulatus.k141_3342297                           4969  7 -     14043 --------T------A----TATA---------T
i Cercocebus_lunulatus.k141_3342297                      I 2 C 0
s Cercocebus_torquatus.k141_3057011                          13067  7 +     27781 --------T------A----TATA---------T
i Cercocebus_torquatus.k141_3057011                      I 2 C 0
s Cercopithecus_ascanius.k141_1024104                        13224 11 -     20310 --------T------ATATATATA---------T
i Cercopithecus_ascanius.k141_1024104                    I 2 C 0
s Cercopithecus_cephus.k141_1078548                          16200  7 +     29689 --------T------A----TATA---------T
i Cercopithecus_cephus.k141_1078548                      I 2 C 0
s Cercopithecus_diana.k141_1150327                           10962  5 -     20078 --------------------TATA---------T
i Cercopithecus_diana.k141_1150327                       I 4 C 0
s Cercopithecus_hamlyni.k141_187466                          18873  5 -     27936 --------------------TATA---------T
i Cercopithecus_hamlyni.k141_187466                      I 6 C 0
s Cercopithecus_lowei.k141_1854285                            7746  2 -     17152 --------T------A------------------
i Cercopithecus_lowei.k141_1854285                       I 2 I 5
s Cercopithecus_albogularis.ctg5                                38827470  9 +  39242232 --------T------ATA--TATA---------T
i Cercopithecus_albogularis.ctg5                               I 2 C 0
s Cercopithecus_mona.ctg39                                21226978  2 -  21565898 --------T------A------------------
i Cercopithecus_mona.ctg39                               I 2 I 5
s Cercopithecus_neglectus.k141_2526306                       44095  9 -     53127 --------T------ATA--TATA---------T
i Cercopithecus_neglectus.k141_2526306                   I 2 C 0
s Cercopithecus_nictitans.k141_1119862                        4347  9 +     13442 --------T------ATA--TATA---------T
i Cercopithecus_nictitans.k141_1119862                   I 2 C 0
s Cercopithecus_petaurista.k141_807961                       18893  2 -     27947 --------T------A------------------
i Cercopithecus_petaurista.k141_807961                   I 2 I 5
s Cercopithecus_pogonias.k141_2303387                         1918  9 +     10558 --------T------ATA--TATA---------T
i Cercopithecus_pogonias.k141_2303387                    I 2 C 0
s Cercopithecus_roloway.k141_2581234                          4931  1 +     14005 ---------------------------------T
i Cercopithecus_roloway.k141_2581234                     I 6 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            6479  4 -      8501 --------T------G----T------------T
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       I 2 C 0
s Cheracebus_lucifer.k141_49986                               2285  6 -     17098 --------T----ATA----T------------T
i Cheracebus_lucifer.k141_49986                          I 2 C 0
s Cheracebus_lugens.k141_1393925                              2161  6 +     17877 --------T----ATA----T------------T
i Cheracebus_lugens.k141_1393925                         I 2 C 0
s Cheracebus_regulus.k141_471822                            159728  6 -    216457 --------T----ATA----T------------T
i Cheracebus_regulus.k141_471822                         I 2 C 0
s Cheracebus_torquatus.k141_1170026                          64197  6 +     76511 --------T----ATA----T------------T
i Cheracebus_torquatus.k141_1170026                      I 2 C 0
s Chiropotes_israelita.k141_747660                          100808  7 +    146308 --------T---ATTA----T------------T
i Chiropotes_israelita.k141_747660                       I 2 C 0
s Chiropotes_sagulatus.k141_1421488                          32615  7 -     50570 --------T---ATTA----T------------T
i Chiropotes_sagulatus.k141_1421488                      I 2 C 0
s Chlorocebus_aethiops.ctg25                              18432795  7 -  18827391 --------T------A----TATA---------T
i Chlorocebus_aethiops.ctg25                             I 2 C 0
s Chlorocebus_pygerythrus.k141_1025673                       19292  7 -     50209 --------T------A----TATA---------T
i Chlorocebus_pygerythrus.k141_1025673                   I 2 C 0
s Chlorocebus_sabaeus.CM001947.1                         135426298  7 + 135778131 --------t------a----t---------atat
i Chlorocebus_sabaeus.CM001947.1                         I 2 C 0
s Colobus_angolensis.KN981557.1                            1914818 13 +   2368649 --------tagataga----t---------agat
i Colobus_angolensis.KN981557.1                          I 2 I 11
s Colobus_guereza.LG01                                   199953066  7 + 200372422 --------T------A----GATA---------T
i Colobus_guereza.LG01                                   I 2 I 11
s Colobus_polykomos.k141_906115                              41375  7 +     84244 --------t------a----G---------atat
i Colobus_polykomos.k141_906115                          I 2 I 11
s Condylura_cristata.JH655891.1                           17550992  4 -  53390261 --------c------c----t------------t
i Condylura_cristata.JH655891.1                          I 2 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           2492  4 +     23735 --------c------c----t------------t
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      I 2 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 52819  4 +     63868 --------A------C----C------------T
i Cricetomys_gambianus.CriGam_scaffold_18520             I 2 I 1
s Crocidura_indochinensis.CroInd_scaffold_1059839               23  4 +      1008 --------C------C----T------------T
i Crocidura_indochinensis.CroInd_scaffold_1059839        I 2 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             30612  4 -     87169 --------C------C----T------------C
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 2 C 0
s Dasypus_novemcinctus.JH564415.1                            69500  4 +   2246927 --------t------g----t------------g
i Dasypus_novemcinctus.JH564415.1                        I 2 C 0
s Delphinapterus_leucas.KZ290073.1                        16813931  4 +  35494412 --------c------c----t------------t
i Delphinapterus_leucas.KZ290073.1                       I 2 C 0
s Desmodus_rotundus.KZ672289.1                             8632070  4 +  20541912 --------c------c----t------------t
i Desmodus_rotundus.KZ672289.1                           I 2 C 0
s Eidolon_helvum.AWHC01278734.1                                742  4 +      2334 --------T------T----T------------T
i Eidolon_helvum.AWHC01278734.1                          I 2 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       314053  4 +    607251 --------c------c----t------------t
i Elaphurus_davidianus.JRFZ01104969.1                    I 2 C 0
s Ellobius_lutescens.LOEQ01008920.1                          23347  4 -    110024 --------A------C----C------------T
i Ellobius_lutescens.LOEQ01008920.1                      I 2 I 1
s Ellobius_talpinus.LOJH01081419.1                            3268  4 +      8657 --------A------C----C------------T
i Ellobius_talpinus.LOJH01081419.1                       I 2 I 1
s Eptesicus_fuscus.JH977646.1                              2149205  4 -  14770903 --------c------c----t------------t
i Eptesicus_fuscus.JH977646.1                            I 2 C 0
s Erythrocebus_patas.Contig38                             21209469  7 -  21539334 --------T------A----TATA---------T
i Erythrocebus_patas.Contig38                            I 2 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           13360  4 +    133382 --------c------c----t------------t
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 2 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             27306  4 -     44125 --------c------c----t------------t
i Eubalaena_japonica.EubJap_flattened_line_31514         I 2 C 0
s Felis_catus.CM001381.2                                  20239177  4 + 206538554 --------c------c----t------------t
i Felis_catus.CM001381.2                                 I 2 C 0
s Felis_catus_fca126.CM031415.1                           20198052  4 + 205367284 --------c------c----t------------t
i Felis_catus_fca126.CM031415.1                          I 2 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 11712  4 -     36744 --------C------C----T------------T
i Felis_nigripes.FelNig_flattened_line_20823             I 2 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               4761  4 -      9135 --------A------C----C------------T
i Galeopterus_variegatus.GalVar_scaffold_108840          I 2 I 1
s Giraffa_tippelskirchi.LVKQ01S007888.1                     611288  4 -    660261 --------c------c----t------------t
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 2 C 0
s Glis_glis.GliGli_scaffold_19807                            33453  4 +     49224 --------a------t----t------------t
i Glis_glis.GliGli_scaffold_19807                        I 2 I 1
s Gorilla_beringei.k141_3596273                              20314 12 -     32273 ATTATTATT------A----T------------T
i Gorilla_beringei.k141_3596273                          I 12 C 0
s Gorilla_gorilla.LT578336.1                              33191918 12 -  33314783 attattatt------a----t------------t
i Gorilla_gorilla.LT578336.1                             I 802 I 762
s Graphiurus_murinus.GraMur_scaffold_10447                   35458  4 +     78134 --------A------C----C------------T
i Graphiurus_murinus.GraMur_scaffold_10447               I 2 I 1
s Helogale_parvula.HelPar_flattened_line_2585               244420  4 +    327341 --------C------C----T------------C
i Helogale_parvula.HelPar_flattened_line_2585            I 2 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 21887  4 +     36099 --------c------c----t------------t
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 2 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112790  4 +    128679 --------C------C----T------------T
i Hippopotamus_amphibius.HipAmp_scaffold_9076            I 2 C 0
s Hipposideros_armiger.JXIK01000431.1                       112534  4 +   1711038 --------c------c----t------------t
i Hipposideros_armiger.JXIK01000431.1                    I 2 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188               1106  4 +      9903 --------c------c----t------------t
i Hipposideros_galeritus.HipGal_scaffold_101188          I 2 C 0
s Hoolock_leuconedys.ctg274                                    439135 12 +    630532 TATATATAT------A----T------------A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  47168  4 +     55795 --------C------C----T------------T
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 2 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7523065  1 -   7955117 ---------------------------------G
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 1
s Inia_geoffrensis.IniGeo_flattened_line_34779                1137  4 -     31341 --------c------c----t------------t
i Inia_geoffrensis.IniGeo_flattened_line_34779           I 2 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                  883  4 -     18011 --------c------c----t------------t
i Kogia_breviceps.KogBre_flattened_line_81059            I 2 C 0
s Lagothrix_lagothricha.k141_1005387                         16864  5 -     38430 --------a----TTA----T-------------
i Lagothrix_lagothricha.k141_1005387                     I 2 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    18911  4 -     42476 --------C------C----T------------C
i Lasiurus_borealis.LasBor_scaffold_32767                I 2 C 0
s Lipotes_vexillifer.KE559953.1                             270192  4 -    662738 --------c------c----t------------t
i Lipotes_vexillifer.KE559953.1                          I 2 C 0
s Lophocebus_aterrimus.ctg367                              1441425  7 +   1826925 --------T------A----TATA---------T
i Lophocebus_aterrimus.ctg367                            I 2 C 0
s Macaca_arctoides.k141_2326796                              11237  7 +     40492 --------T------A----TATA---------T
i Macaca_arctoides.k141_2326796                          I 2 C 0
s Macaca_assamensis.Contig5                               59680491  7 +  60120075 --------T------A----TATA---------T
i Macaca_assamensis.Contig5                              I 2 C 0
s Macaca_cyclopis.k119_18836                                 17008  7 -     26193 --------T------A----TATA---------T
i Macaca_cyclopis.k119_18836                             I 2 C 0
s Macaca_fascicularis.k141_814140                            84786  7 -    114318 --------T------A----TATA---------T
i Macaca_fascicularis.k141_814140                        I 4 C 0
s Macaca_fuscata.k119_255327                                 10475  7 -     23192 --------T------A----TATA---------T
i Macaca_fuscata.k119_255327                             I 2 C 0
s Macaca_leonina.k141_3550399                                19941  7 -     29190 --------T------A----TATA---------T
i Macaca_leonina.k141_3550399                            I 2 C 0
s Macaca_maura.k141_2733130                                  28519  7 +     37952 --------T------A----TATA---------T
i Macaca_maura.k141_2733130                              I 2 C 0
s Macaca_mulatta.NC_041758.1                             186843594  7 + 187317192 --------t------a----t---------atat
i Macaca_mulatta.NC_041758.1                             I 2 C 0
s Macaca_nemestrina.KQ007038.1                            25462174  7 -  25927173 --------t------a----t---------atat
i Macaca_nemestrina.KQ007038.1                           I 2 C 0
s Macaca_nigra.k141_1655396                                  84377  7 +     89720 --------T------A----TATA---------T
i Macaca_nigra.k141_1655396                              I 4 C 0
s Macaca_radiata.k141_3680011                                11366  7 +     20474 --------T------A----TATA---------T
i Macaca_radiata.k141_3680011                            I 2 C 0
s Macaca_siberu.k141_635500                                  11165  7 -     14993 --------T------A----TATA---------T
i Macaca_siberu.k141_635500                              I 2 C 0
s Macaca_silenus.Contig273                                  334027  7 -    668171 --------T------A----TATA---------T
i Macaca_silenus.Contig273                               I 2 C 0
s Macaca_thibetana.k99_256239                                 9475  7 -     24072 --------T------A----TATA---------T
i Macaca_thibetana.k99_256239                            I 2 C 0
s Macaca_tonkeana.k141_1498238                               30108  7 -     45290 --------T------A----TATA---------T
i Macaca_tonkeana.k141_1498238                           I 2 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92862  4 +     94391 --------c------c----t------------t
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 2 C 0
s Mandrillus_leucophaeus.scaffold280                      23941694  7 -  24302211 --------T------A----TATA---------T
i Mandrillus_leucophaeus.scaffold280                     I 2 C 0
s Mandrillus_sphinx.Contig270                               355809  7 +    752769 --------T------A----TATA---------T
i Mandrillus_sphinx.Contig270                            I 2 C 0
s Marmota_marmota.CZRN01000018.1                          33105385  4 -  40650429 --------a------c----t------------a
i Marmota_marmota.CZRN01000018.1                         I 2 I 1
s Megaderma_lyra.MegLyr_scaffold_4542                        15398  4 -    207569 --------C------C----T------------T
i Megaderma_lyra.MegLyr_scaffold_4542                    I 2 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 35604  4 +    140813 --------A------T----C------------T
i Meriones_unguiculatus.MerUng_scaffold_7390             I 2 I 1
s Mesoplodon_bidens.MesBid_scaffold_108144                    5575  4 +     10310 --------c------c----t------------t
i Mesoplodon_bidens.MesBid_scaffold_108144               I 2 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                17817  4 -     19307 --------c------c----t------------t
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 2 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1852411  4 +   8254450 --------c------c----g------------t
i Miniopterus_natalensis.LDJU01000034.1                  I 2 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             36095  4 +     64694 --------c------c----g------------t
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 2 C 0
s Miopithecus_ogouensis.k141_534055                          13373  9 -     28506 --------T------ATA--TATA---------T
i Miopithecus_ogouensis.k141_534055                      I 2 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    29316  4 -    437263 --------c------c----t------------t
i Monodon_monoceros.MonMon_M_scaffold_103                I 2 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 143406  4 -    366855 --------C------C----T------------T
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 2 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   3334  4 +     82753 --------C------C----T------------T
i Moschus_moschiferus.MosMos_scaffold_13123              I 2 C 0
s Murina_feae.MurFea_scaffold_85699                           9160  4 +     14753 --------c------t----t------------t
i Murina_feae.MurFea_scaffold_85699                      I 2 C 0
s Mus_caroli.LT608237.1                                   84363960  4 - 120012414 --------G------C----T------------T
i Mus_caroli.LT608237.1                                  I 2 I 1
s Mus_musculus.chr8                                       87653460  4 - 129401213 --------A------C----T------------T
i Mus_musculus.chr8                                      I 2 I 1
s Mus_spretus.CM004101.1                                  90755950  4 - 130317789 --------A------C----T------------T
i Mus_spretus.CM004101.1                                 I 2 I 1
s Muscardinus_avellanarius.MusAve_scaffold_82313              6932  4 +     14296 --------A------T----C------------T
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 3 I 1
s Myotis_brandtii.KE162005.1                                282909  4 -  10118263 --------c------c----t------------t
i Myotis_brandtii.KE162005.1                             I 2 C 0
s Myotis_davidii.KB100139.1                                1590227  4 -   6019432 --------c------c----t------------t
i Myotis_davidii.KB100139.1                              I 2 C 0
s Myotis_lucifugus.GL429869.1                              3906339  4 -   4330536 --------c------c----t------------t
i Myotis_lucifugus.GL429869.1                            I 2 C 0
s Myotis_myotis.MyoMyo_scaffold_44643                          641  4 +     25416 --------c------c----t------------t
i Myotis_myotis.MyoMyo_scaffold_44643                    I 2 C 0
s Nannospalax_galili.KL204047.1                            2039043  4 -   3037898 --------A------C----T------------T
i Nannospalax_galili.KL204047.1                          I 23 I 100
s Nasalis_larvatus.k141_413338                               19421 16 +     21681 --------T------A----TATATATAGTTATT
i Nasalis_larvatus.k141_413338                           I 2 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5868279  4 +   7148211 --------c------c----t------------t
i Neophocaena_asiaeorientalis.KZ687982.1                 I 2 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    759597  4 +    783361 --------T------C----T------------T
i Noctilio_leporinus.NocLep_scaffold_251                 I 5 C 0
s Ochotona_princeps.JH802162.1                             1367083  4 +   3988456 --------A------C----C------------G
i Ochotona_princeps.JH802162.1                           I 2 C 0
s Odocoileus_virginianus.KZ100018.1                         146855  4 +    630418 --------c------c----t------------t
i Odocoileus_virginianus.KZ100018.1                      I 2 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          80968  4 -    150152 --------C------C----t------------t
i Okapia_johnstoni.LVCL01S0005463.1                      I 2 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                      442  4 +    140218 --------A------C----C------------C
i Ondatra_zibethicus.OndZib_scaffold_7387                I 2 I 1
s Onychomys_torridus.OnyTor_scaffold_2986                    83367  4 +    102263 --------A------C----C------------T
i Onychomys_torridus.OnyTor_scaffold_2986                I 2 I 1
s Orcinus_orca.KB316932.1                                  2784172  4 -  10937097 --------c------g----t------------t
i Orcinus_orca.KB316932.1                                I 2 C 0
s Ovis_aries.CM001607.2                                   17589638  4 +  44047080 --------C------C----T------------T
i Ovis_aries.CM001607.2                                  I 2 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      177840  4 -    191736 --------C------C----T------------T
i Ovis_canadensis.OviCan_scaffold_2572                   I 2 C 0
s Pan_paniscus.KQ411613.1                                    48436 12 +     80009 attattatt------a----t------------t
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.KZ622849.1                                 26642 12 +    110857 attattatt------a----t------------t
i Pan_troglodytes.KZ622849.1                             I 92 I 771
s Panthera_onca.PanOnc_flattened_line_3271                  153248  4 +    230217 --------C------C----T------------T
i Panthera_onca.PanOnc_flattened_line_3271               I 2 C 0
s Panthera_pardus.KV860321.1                                266559  4 +  18783137 --------c------c----t------------t
i Panthera_pardus.KV860321.1                             I 2 C 0
s Panthera_tigris.KE722367.1                               4723384  4 -   8748460 --------c------c----t------------t
i Panthera_tigris.KE722367.1                             I 2 C 0
s Pantholops_hodgsonii.KE114653.1                          1268573  4 -   2937107 --------c------c----t------------t
i Pantholops_hodgsonii.KE114653.1                        I 2 C 0
s Papio_anubis.CM001495.2                                183447498  7 + 183742232 --------t------a----t---------atat
i Papio_anubis.CM001495.2                                I 2 C 0
s Papio_cynocephalus.k141_4307930                            11148  7 +     20448 --------T------A----TATA---------T
i Papio_cynocephalus.k141_4307930                        I 2 C 0
s Papio_hamadryas.Contig39                                20567956  7 +  20919399 --------T------A----TATA---------T
i Papio_hamadryas.Contig39                               I 2 C 0
s Papio_kindae.k141_1936966                                   9902  7 +     41871 --------T------A----TATA---------T
i Papio_kindae.k141_1936966                              I 2 C 0
s Papio_papio.k141_802527                                    13181  7 +     27711 --------T------A----TATA---------T
i Papio_papio.k141_802527                                I 2 C 0
s Papio_ursinus.k141_5274964                                  4180  7 -     11374 --------T------A----TATA---------T
i Papio_ursinus.k141_5274964                             I 2 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14689  4 -     78924 --------C------C----T------------T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 2 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              11241  4 +     63832 --------c------c----t------------t
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 2 C 0
s Piliocolobus_badius.k141_1142974                            2527  7 +     68526 --------T------A----TATA---------T
i Piliocolobus_badius.k141_1142974                       I 2 I 11
s Piliocolobus_gordonorum.k141_381342                        42668  7 +     89929 --------T------A----TATA---------T
i Piliocolobus_gordonorum.k141_381342                    I 2 I 11
s Piliocolobus_kirkii.k141_448987                            44084  7 +     51399 --------T------A----TATA---------T
i Piliocolobus_kirkii.k141_448987                        I 2 I 11
s Piliocolobus_tephrosceles.PDMG02000141.1                14300321  7 -  14605196 --------t------a----t---------atat
i Piliocolobus_tephrosceles.PDMG02000141.1               I 2 I 11
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3978  4 +     22620 --------c------c----t------------t
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 2 C 0
s Pithecia_albicans.k141_1476471                              6079  7 +     26961 --------aa---TTA----T------------T
i Pithecia_albicans.k141_1476471                         I 2 C 0
s Pithecia_chrysocephala.k141_839575                          2207  7 +     23417 --------T---ATTA----T------------T
i Pithecia_chrysocephala.k141_839575                     I 2 C 0
s Pithecia_hirsuta.k141_305604                                6071  7 +     29694 --------aa---TTA----T------------T
i Pithecia_hirsuta.k141_305604                           I 2 C 0
s Pithecia_mittermeieri.k141_446740                          31097  7 +     52772 --------aa---TTA----T------------T
i Pithecia_mittermeieri.k141_446740                      I 2 C 0
s Pithecia_pissinattii.k141_1824269                           6093  7 +     26198 --------aa---TTA----T------------T
i Pithecia_pissinattii.k141_1824269                      I 2 C 0
s Pithecia_pithecia.tarseq_165                             3942624  7 +   4542175 --------T---ATTA----T------------T
i Pithecia_pithecia.tarseq_165                           I 2 C 0
s Pithecia_vanzolinii.k141_1697688                            6057  7 -     23490 --------aa---TTA----T------------T
i Pithecia_vanzolinii.k141_1697688                       I 2 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610            547  4 +      7680 --------c------c----t------------t
i Platanista_gangetica.PlaMin_flattened_line_173610      I 2 C 0
s Plecturocebus_bernhardi.k141_2549090                       10320  3 -     39866 ---------------A----T------------T
i Plecturocebus_bernhardi.k141_2549090                   I 4 C 0
s Plecturocebus_brunneus.k141_1495506                        19484  3 +     34906 ---------------A----T------------T
i Plecturocebus_brunneus.k141_1495506                    I 4 C 0
s Plecturocebus_caligatus.k141_1382851                       23746  3 +     87950 ---------------A----T------------T
i Plecturocebus_caligatus.k141_1382851                   I 4 C 0
s Plecturocebus_cinerascens.k141_1164729                     24575  3 +     88961 ---------------A----T------------T
i Plecturocebus_cinerascens.k141_1164729                 I 3 C 0
s Plecturocebus_cupreus.k141_2351393                         10243  3 +     39403 ---------------A----T------------T
i Plecturocebus_cupreus.k141_2351393                     I 4 C 0
s Plecturocebus_dubius.k141_1058799                          24026  3 -     87928 ---------------A----T------------T
i Plecturocebus_dubius.k141_1058799                      I 4 C 0
s Plecturocebus_grovesi.k141_2013005                         30987  3 +     60166 ---------------A----T------------T
i Plecturocebus_grovesi.k141_2013005                     I 4 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      31183  3 +     67232 ---------------A----T------------T
i Plecturocebus_hoffmannsi.k141_3303950                  I 4 C 0
s Plecturocebus_miltoni.k141_349282                          26656  3 +     90634 ---------------A----T------------T
i Plecturocebus_miltoni.k141_349282                      I 3 C 0
s Plecturocebus_moloch.k141_1031110                          24029  3 -     89403 ---------------A----T------------T
i Plecturocebus_moloch.k141_1031110                      I 4 C 0
s Pongo_abelii.CM009266.2                                189135454 12 + 189387572 attattatt------a----t------------t
i Pongo_abelii.CM009266.2                                I 15 C 0
s Pongo_pygmaeus.ctg66                                     9575064 12 +   9816681 ATTATTATT------A----T------------T
i Pongo_pygmaeus.ctg66                                   I 15 C 0
s Presbytis_comata.k141_677006                               77602 16 -     81375 --------T------A----TATATATTGTTATT
i Presbytis_comata.k141_677006                           I 2 C 0
s Presbytis_mitrata.k141_1087752                              9433 16 +     19060 --------T------A----TATATATTGTTATT
i Presbytis_mitrata.k141_1087752                         I 2 C 0
s Psammomys_obesus.NESX01036370.1                            13237  4 -     21651 --------A------T----C------------T
i Psammomys_obesus.NESX01036370.1                        I 2 I 1
s Pteronotus_parnellii.KE909381.1                            16889  4 -     21811 --------C------C----T------------T
i Pteronotus_parnellii.KE909381.1                        I 2 C 0
s Pteropus_alecto.KB030862.1                              22978948  4 +  28871421 --------c------c----t------------t
i Pteropus_alecto.KB030862.1                             I 2 C 0
s Pteropus_vampyrus.KN525825.1                             1361933  4 +   4952924 --------C------C----T------------T
i Pteropus_vampyrus.KN525825.1                           I 2 C 0
s Puma_concolor.QAVW01001104.1                            20276447  4 -  38429054 --------c------c----t------------t
i Puma_concolor.QAVW01001104.1                           I 2 C 0
s Pygathrix_cinerea.k141_1153803                             19429  1 -     91421 ---------------------------------T
i Pygathrix_cinerea.k141_1153803                         I 19 C 0
s Pygathrix_nigripes_b.ctg100                                 7613541 16 +   7812017 --------T------A----TATATATTGTTATT
i Pygathrix_nigripes_b.ctg100                               I 8 C 0
s Pygathrix_nigripes_a.k141_215492                             19448  2 -     72585 --------T------A------------------
i Pygathrix_nigripes_a.k141_215492                         I 8 I 12
s Rangifer_tarandus.RanTarSib_scaffold_29737                  8690  4 +     55207 --------c------c----t------------t
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 2 C 0
s Rattus_norvegicus.chr16                                 53573547  4 +  90668790 --------A------C----C------------T
i Rattus_norvegicus.chr16                                I 2 I 1
s Rhinolophus_sinicus.LVEH01000134.1                        368996  4 -   3329780 --------c------c----t------------t
i Rhinolophus_sinicus.LVEH01000134.1                     I 2 C 0
s Rhinopithecus_bieti.k119_1041714                               9 14 +      5697 --------------------GATGTAAAATTATT
i Rhinopithecus_bieti.k119_1041714                       N 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91240481 16 - 195417433 --------t------a----tatatattgttatt
i Rhinopithecus_roxellana.NC_044550.1                    I 8 C 0
s Rhinopithecus_strykeri.ctg102                            7676130  2 +   7961872 --------T------A------------------
i Rhinopithecus_strykeri.ctg102                          I 8 I 12
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                90022  4 -     96226 --------C------C----T------------T
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 2 C 0
s Saiga_tatarica.SaiTat_scaffold_133311                       1172  4 +      9503 --------c------t----t------------t
i Saiga_tatarica.SaiTat_scaffold_133311                  I 2 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    155307  4 -    313613 --------C------C----T------------T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 2 C 0
s Semnopithecus_entellus.k141_1672505                         4284 15 -     12572 ---------------A----TATATATTGTTATT
i Semnopithecus_entellus.k141_1672505                    I 3 C 0
s Semnopithecus_hypoleucos.k141_1615806                      31136 15 +     39453 ---------------A----TATATATTGTTATT
i Semnopithecus_hypoleucos.k141_1615806                  I 3 C 0
s Semnopithecus_johnii.k141_670120                           11640 15 +     27826 ---------------A----TATATATTGTTATT
i Semnopithecus_johnii.k141_670120                       I 3 C 0
s Semnopithecus_priam.k141_638794                            11185 15 -     19483 ---------------A----TATATATTGTTATT
i Semnopithecus_priam.k141_638794                        I 3 C 0
s Semnopithecus_schistaceus.k141_1572284                      4483 15 -     12762 ---------------A----TATATATTGTTATT
i Semnopithecus_schistaceus.k141_1572284                 I 3 C 0
s Semnopithecus_vetulus.k141_910252                           4328 13 +     13763 ---------------A----TATATA--GTTATT
i Semnopithecus_vetulus.k141_910252                      I 3 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     3144  4 -     30804 --------A------C----C------------T
i Sigmodon_hispidus.SigHis_scaffold_42075                I 2 I 1
s Sorex_araneus.JH798187.1                                13653130  4 -  18376816 --------C------C----T------------T
i Sorex_araneus.JH798187.1                               I 2 C 0
s Spermophilus_dauricus.KZ294078.1                         1956222  1 -   3870691 ---------------------------------G
i Spermophilus_dauricus.KZ294078.1                       C 0 I 1
s Suricata_suricatta.SurSur_flattened_line_6629              20680  4 -    196729 --------C------C----T------------C
i Suricata_suricatta.SurSur_flattened_line_6629          I 2 C 0
s Sus_scrofa.CM000828.4                                    6813819  4 +  69701581 --------c------c----t------------t
i Sus_scrofa.CM000828.4                                  I 2 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                13360  4 +     41958 --------c------c----t------------t
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 2 C 0
s Tarsius_lariang.k141_2201908                               28234  4 +     70052 --------a------a----a------------g
i Tarsius_lariang.k141_2201908                           I 2 C 0
s Tarsius_wallacei.k141_254427                                3031  4 -     16117 --------a------a----a------------g
i Tarsius_wallacei.k141_254427                           I 2 C 0
s Theropithecus_gelada.CM009954.1                        186432806  7 + 186847797 --------t------a----t---------atat
i Theropithecus_gelada.CM009954.1                        I 2 C 0
s Tolypeutes_matacus.TolMat_scaffold_85600                    4553  4 +     18632 --------T------G----T------------T
i Tolypeutes_matacus.TolMat_scaffold_85600               I 2 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     83162  4 +    610378 --------c------c----t------------t
i Tonatia_saurophila.TonSau_scaffold_294                 I 2 C 0
s Trachypithecus_auratus.k141_722599                         15221  4 -     20410 --------T----ATA------------------
i Trachypithecus_auratus.k141_722599                     I 2 I 12
s Trachypithecus_crepusculus.k141_582567                      4344 18 -     12674 --------T----ATA----TATATATTGTTATT
i Trachypithecus_crepusculus.k141_582567                 I 2 C 0
s Trachypithecus_francoisi.k141_1412647                      11731 14 -     19997 --------------------TATATATTGTTATT
i Trachypithecus_francoisi.k141_1412647                  I 2 C 0
s Trachypithecus_cristatus.k141_580354                       15329  4 +     19930 --------T----ATA------------------
i Trachypithecus_cristatus.k141_580354                   I 2 I 12
s Trachypithecus_geei.k141_277701                            51873 15 -     60166 ---------------A----TATATATAGTTATT
i Trachypithecus_geei.k141_277701                        I 3 C 0
s Trachypithecus_hatinhensis.k141_17719                        967 14 +      9229 --------------------TATATATTGTTATT
i Trachypithecus_hatinhensis.k141_17719                  I 2 C 0
s Trachypithecus_laotum.k141_907409                          12869 14 -     21137 --------------------TATATATAGTTATT
i Trachypithecus_laotum.k141_907409                      I 2 C 0
s Trachypithecus_leucocephalus.k141_101510                     969 14 +      9131 --------------------TATATATTGTTATT
i Trachypithecus_leucocephalus.k141_101510               I 2 C 0
s Trachypithecus_germaini.k141_912491                        19335  4 -     27529 --------T----ATA------------------
i Trachypithecus_germaini.k141_912491                    I 2 I 12
s Trachypithecus_melamera.k141_105182                          934 15 -      3730 ---------------A----TATATATTGTTATT
i Trachypithecus_melamera.k141_105182                    I 3 C 0
s Trachypithecus_obscurus.k141_190785                        29202 15 +     32220 ---------------A----TATATATTGTTATT
i Trachypithecus_obscurus.k141_190785                    I 3 C 0
s Trachypithecus_phayrei.ctg124                            5943298  4 +   6242583 --------T----ATA------------------
i Trachypithecus_phayrei.ctg124                          I 2 I 12
s Trachypithecus_pileatus.k141_2007326                       12551 15 +     20839 ---------------A----TATATATTGTTATT
i Trachypithecus_pileatus.k141_2007326                   I 3 C 0
s Tupaia_chinensis.KB320699.1                              2159215  4 +   4065304 --------T------G----T------------G
i Tupaia_chinensis.KB320699.1                            I 3 C 0
s Tupaia_tana.TupTan_flattened_line_306982                    1628  4 -      4186 --------T------C----T------------C
i Tupaia_tana.TupTan_flattened_line_306982               I 2 C 0
s Tursiops_truncatus.MRVK01000835.1                       15740425  4 +  33153633 --------c------c----t------------t
i Tursiops_truncatus.MRVK01000835.1                      I 2 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   55383  4 -     77625 --------C------C----T------------T
i Uropsilus_gracilis.UroGra_scaffold_12083               I 2 C 0
s Vicugna_pacos.KN270157.1                                 5374082  4 -   5488506 --------c------c----t------------t
i Vicugna_pacos.KN270157.1                               I 2 C 0
s Xerus_inauris.XerIna_scaffold_2302                          3267  4 +    224448 --------a------c----c------------a
i Xerus_inauris.XerIna_scaffold_2302                     I 2 I 1
s Zapus_hudsonius.ZapHud_scaffold_11398                      16805  4 +     63895 --------A------A----C------------T
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 2 I 1
s Ziphius_cavirostris.ZipCav_flattened_line_761354             730  4 -      1267 --------C------C----T------------T
i Ziphius_cavirostris.ZipCav_flattened_line_761354       I 2 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Mus_pahari.LT608297.1                                   31358183  2 -  89631738 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 12841 537 -     43706 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_40725                    2573 51 +     27266 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              107540  0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    389823 643 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      121344 643 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Petromus_typicus.PetTyp_scaffold_221660                      871  0 -      2102 C
e Peromyscus_maniculatus.KI615324.1                       18214100  8 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Otocyon_megalotis.JAEUCK010005147.1                       464401 867 -    559221 I
e Oryctolagus_cuniculus.CM000791.1                        67149665 1414 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Octodon_degus.JH651603.1                                  749928  0 +  11899542 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9151314 530 -   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     73439  0 -     80779 C
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Mungos_mungo.MunMun_flattened_line_23663                   36398  7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184611 154 -  29670104 I
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Manis_pentadactyla.KN006162.1                              53022 987 -    317179 I
e Manis_javanica.JSZB01003497.1                              20877 990 +    737560 I
e Lycaon_pictus.CM007581.1                                17957377 535 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     8427 743 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Jaculus_jaculus.JH725527.1                               8278673 121 -   9596543 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hystrix_cristata.HysCri_scaffold_5660                      85084  0 +    135385 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23782  0 -    143317 C
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20664158  0 +  22651954 C
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Fukomys_damarensis.KN121974.1                             852512  0 +   3816255 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               35993 651 +    498745 I
e Equus_caballus.CM000403.2                               18533964 651 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1286155 651 +   4378816 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 35526  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    38384  0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    8624 649 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  675871 642 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasyprocta_punctata.DasPun_flattened_line_15900             2011  0 -     75252 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  38182  0 +     51376 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11668671  0 + 224834208 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1254902  0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5047 647 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                       102948  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18364066  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18351806  0 -  23392119 C
e Capromys_pilorides.CapPil_scaffold_65020                    3253  0 -     12242 C
e Canis_lupus_orion.HG994398.1                            18502439 535 +  63665305 I
e Canis_lupus_familiaris.chr16                            17961137 535 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9036666 537 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     1966 535 -     43241 I
e CanFam4.chr16                                           17801223 537 -  60362399 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Allactaga_bullata.AllBul_scaffold_9566                     75924 121 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T

a score=0.000000
s hg38.chrUn_KI270753v1                                      11100 1 +     62944 A
s Allenopithecus_nigroviridis.k141_3361533                   18935 1 -     52922 A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         18871 1 -     28001 C
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          9366 1 -     18505 C
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                          10219 1 -     12518 C
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             10575 1 +     51355 A
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                3682 1 -     36483 A
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              14135 1 +     28687 A
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 2607 1 +     27940 A
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            3695 1 -      9457 A
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             2653 1 +     30492 A
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              6870 1 +     47717 A
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              3375 1 +      5663 A
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             17826 1 +     50774 A
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Cacajao_ayresi.k141_552049                                103686 1 -    122966 A
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   63189 1 +     81800 A
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  32371 1 -     95584 A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         56472 1 -    119600 A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Carlito_syrichta.NW_007259797.1                           157744 1 -    496798 a
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         7241 1 +     31688 a
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4479887 1 +   4669795 a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        4386 1 +     17872 A
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4976 1 -     14043 A
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          13074 1 +     27781 A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        13235 1 -     20310 A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          16207 1 +     29689 A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10967 1 -     20078 A
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          18878 1 -     27936 A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            7753 1 -     17152 A
i Cercopithecus_lowei.k141_1854285                       I 5 C 0
s Cercopithecus_albogularis.ctg5                                38827479 1 +  39242232 A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226985 1 -  21565898 A
i Cercopithecus_mona.ctg39                               I 5 C 0
s Cercopithecus_neglectus.k141_2526306                       44104 1 -     53127 A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        4356 1 +     13442 A
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       18900 1 -     27947 A
i Cercopithecus_petaurista.k141_807961                   I 5 C 0
s Cercopithecus_pogonias.k141_2303387                         1927 1 +     10558 A
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4932 1 +     14005 A
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               2291 1 -     17098 A
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              2167 1 +     17877 A
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            159734 1 -    216457 A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          64203 1 +     76511 A
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chiropotes_israelita.k141_747660                          100815 1 +    146308 A
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          32622 1 -     50570 A
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18432802 1 -  18827391 A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       19299 1 -     50209 A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135426305 1 + 135778131 a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1914842 1 +   2368649 a
i Colobus_angolensis.KN981557.1                          I 11 C 0
s Colobus_guereza.LG01                                   199953084 1 + 200372422 A
i Colobus_guereza.LG01                                   I 11 C 0
s Colobus_polykomos.k141_906115                              41393 1 +     84244 a
i Colobus_polykomos.k141_906115                          I 11 C 0
s Erythrocebus_patas.Contig38                             21209476 1 -  21539334 A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Gorilla_beringei.k141_3596273                              20326 1 -     32273 A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186342462 1 + 186649187 a
i Gorilla_gorilla.LT578341.1                             I 24 C 0
s Hoolock_leuconedys.ctg274                                    439147 1 +    630532 A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Lophocebus_aterrimus.ctg367                              1441432 1 +   1826925 A
i Lophocebus_aterrimus.ctg367                            C 0 I 2
s Macaca_arctoides.k141_2326796                              11244 1 +     40492 A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59680498 1 +  60120075 A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 17015 1 -     26193 A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            84793 1 -    114318 A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 10482 1 -     23192 A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19948 1 -     29190 A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  28526 1 +     37952 A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186843601 1 + 187317192 a
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25462181 1 -  25927173 a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  84384 1 +     89720 A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                11373 1 +     20474 A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  11172 1 -     14993 A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  334034 1 -    668171 A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 9482 1 -     24072 A
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               30115 1 -     45290 A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23941701 1 -  24302211 A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355816 1 +    752769 A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Miopithecus_ogouensis.k141_534055                          13382 1 -     28506 A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Nasalis_larvatus.k141_413338                               19437 1 +     21681 A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Pan_paniscus.KQ411613.1                                    48448 1 +     80009 a
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189147313 1 + 189151597 a
i Pan_troglodytes.CM009242.2                             I 25 C 0
s Papio_anubis.CM001495.2                                183447505 1 + 183742232 a
i Papio_anubis.CM001495.2                                C 0 I 2
s Papio_cynocephalus.k141_4307930                            11155 1 +     20448 A
i Papio_cynocephalus.k141_4307930                        C 0 I 2
s Papio_hamadryas.Contig39                                20567963 1 +  20919399 A
i Papio_hamadryas.Contig39                               C 0 I 2
s Papio_kindae.k141_1936966                                   9909 1 +     41871 A
i Papio_kindae.k141_1936966                              C 0 I 2
s Papio_papio.k141_802527                                    13188 1 +     27711 A
i Papio_papio.k141_802527                                C 0 I 2
s Papio_ursinus.k141_5274964                                  4187 1 -     11374 A
i Papio_ursinus.k141_5274964                             C 0 I 2
s Piliocolobus_badius.k141_1142974                            2545 1 +     68526 A
i Piliocolobus_badius.k141_1142974                       I 11 C 0
s Piliocolobus_gordonorum.k141_381342                        42686 1 +     89929 a
i Piliocolobus_gordonorum.k141_381342                    I 11 C 0
s Piliocolobus_kirkii.k141_448987                            44102 1 +     51399 a
i Piliocolobus_kirkii.k141_448987                        I 11 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14300339 1 -  14605196 a
i Piliocolobus_tephrosceles.PDMG02000141.1               I 11 C 0
s Pithecia_albicans.k141_1476471                              6086 1 +     26961 A
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          2214 1 +     23417 A
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                6078 1 +     29694 A
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          31104 1 +     52772 A
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           6100 1 +     26198 A
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3942631 1 +   4542175 A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            6064 1 -     23490 A
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       10323 1 -     39866 A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        19487 1 +     34906 A
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       23749 1 +     87950 A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     24578 1 +     88961 A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         10246 1 +     39403 A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          24029 1 -     87928 A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         30990 1 +     60166 A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      31186 1 +     67232 A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          26659 1 +     90634 A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          24032 1 -     89403 A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189135466 1 + 189387572 a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9575076 1 +   9816681 A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               77618 1 -     81375 A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              9449 1 +     19060 A
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Pygathrix_cinerea.k141_1153803                             19430 1 -     91421 A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7613557 1 +   7812017 A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             19462 1 -     72585 A
i Pygathrix_nigripes_a.k141_215492                         I 12 C 0
s Rhinopithecus_bieti.k119_1041714                              23 1 +      5697 A
i Rhinopithecus_bieti.k119_1041714                       C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91240497 1 - 195417433 a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7676144 1 +   7961872 A
i Rhinopithecus_strykeri.ctg102                          I 12 C 0
s Semnopithecus_entellus.k141_1672505                         4299 1 -     12572 A
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      31151 1 +     39453 A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           11655 1 +     27826 A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            11200 1 -     19483 A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      4498 1 -     12762 A
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           4341 1 +     13763 A
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Tarsius_lariang.k141_2201908                               28238 1 +     70052 a
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                3035 1 -     16117 a
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186432813 1 + 186847797 a
i Theropithecus_gelada.CM009954.1                        C 0 I 2
s Trachypithecus_auratus.k141_722599                         15237 1 -     20410 A
i Trachypithecus_auratus.k141_722599                     I 12 C 0
s Trachypithecus_crepusculus.k141_582567                      4362 1 -     12674 A
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       15345 1 +     19930 A
i Trachypithecus_cristatus.k141_580354                   I 12 C 0
s Trachypithecus_francoisi.k141_1412647                      11745 1 -     19997 A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            51888 1 -     60166 A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        19351 1 -     27529 A
i Trachypithecus_germaini.k141_912491                    I 12 C 0
s Trachypithecus_hatinhensis.k141_17719                        981 1 +      9229 A
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          12883 1 -     21137 A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                     983 1 +      9131 A
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                          949 1 -      3730 A
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        29217 1 +     32220 A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5943314 1 +   6242583 A
i Trachypithecus_phayrei.ctg124                          I 12 C 0
s Trachypithecus_pileatus.k141_2007326                       12566 1 +     20839 A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
e Lagothrix_lagothricha.k141_1005387                         16869 0 -     38430 C
e Ateles_paniscus.k141_457735                                22712 0 +     72325 C
e Ateles_marginatus.k141_803263                              14824 0 -     40414 C
e Ateles_geoffroyi_a.k141_833924                               10442 0 -     89868 C
e Ateles_chamek.k141_1806455                                 28667 0 -     30947 C
e Ateles_belzebuth.k141_445860                               45866 0 -     48001 C
e Ateles_geoffroyi_b.tarseq_1536                             21211067 0 -  21539123 C
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202 0 +      8798 C
e Galago_senegalensis.k141_631886                             7400 0 +     11339 C
e Galago_moholi.ctg2040                                     429710 0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964 2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Mus_pahari.LT608297.1                                   31358183 2 -  89631738 I
e Mus_spretus.CM004101.1                                  90755954 1 - 130317789 I
e Mus_musculus.chr8                                       87653464 1 - 129401213 I
e Mus_caroli.LT608237.1                                   84363964 1 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445 0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734 0 -     33856 C
e Perodicticus_potto.k141_1186926                              597 0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219 0 -      3244 C
e Ziphius_cavirostris.ZipCav_flattened_line_761354             734 0 -      1267 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      16809 1 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Xerus_inauris.XerIna_scaffold_2302                          3271 1 +    224448 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 12841 537 -     43706 I
e Vicugna_pacos.KN270157.1                                 5374086 0 -   5488506 C
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Uropsilus_gracilis.UroGra_scaffold_12083                   55387 0 -     77625 C
e Tursiops_truncatus.MRVK01000835.1                       15740429 0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_306982                    1632 0 -      4186 C
e Tupaia_chinensis.KB320699.1                              2159219 0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_40725                    2573 51 +     27266 I
e Tonatia_saurophila.TonSau_scaffold_294                     83166 0 +    610378 C
e Tolypeutes_matacus.TolMat_scaffold_85600                    4557 0 +     18632 C
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              107540 0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    389823 643 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      121344 643 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                13364 0 +     41958 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6813823 0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629              20684 0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Spermophilus_dauricus.KZ294078.1                         1956223 1 -   3870691 I
e Sorex_araneus.JH798187.1                                13653134 0 -  18376816 C
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_42075                     3148 1 -     30804 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    155311 0 -    313613 C
e Saiga_tatarica.SaiTat_scaffold_133311                       1176 0 +      9503 C
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                90026 0 -     96226 C
e Rhinolophus_sinicus.LVEH01000134.1                        369000 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53573551 1 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  8694 0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20276451 0 -  38429054 C
e Pteropus_vampyrus.KN525825.1                             1361937 0 +   4952924 C
e Pteropus_alecto.KB030862.1                              22978952 0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Pteronotus_parnellii.KE909381.1                            16893 0 -     21811 C
e Psammomys_obesus.NESX01036370.1                            13241 1 -     21651 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_173610            551 0 +      7680 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             3982 0 +     22620 C
e Phocoena_phocoena.PhoPho_flattened_line_24159              11245 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_221660                      871 0 -      2102 C
e Peromyscus_maniculatus.KI615324.1                       18214100 8 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14693 0 -     78924 C
e Pantholops_hodgsonii.KE114653.1                          1268577 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4723388 0 -   8748460 C
e Panthera_pardus.KV860321.1                                266563 0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  153252 0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      177844 0 -    191736 C
e Ovis_aries.CM001607.2                                   17589642 0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       464401 867 -    559221 I
e Oryctolagus_cuniculus.CM000791.1                        67149665 1414 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Orcinus_orca.KB316932.1                                  2784176 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    83371 1 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_7387                      446 1 +    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          80972 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         146859 0 +    630418 C
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Octodon_degus.JH651603.1                                  749928 0 +  11899542 C
e Ochotona_princeps.JH802162.1                             1367087 0 +   3988456 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869 0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414 0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947 0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9151314 530 -   9404916 I
e Noctilio_leporinus.NocLep_scaffold_251                    759601 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5868283 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Nannospalax_galili.KL204047.1                            2039047 100 -   3037898 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_44643                          645 0 +     25416 C
e Myotis_lucifugus.GL429869.1                              3906343 0 -   4330536 C
e Myotis_davidii.KB100139.1                                1590231 0 -   6019432 C
e Myotis_brandtii.KE162005.1                                282913 0 -  10118263 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     73439 0 -     80779 C
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Muscardinus_avellanarius.MusAve_scaffold_82313              6936 1 +     14296 I
e Murina_feae.MurFea_scaffold_85699                           9164 0 +     14753 C
e Mungos_mungo.MunMun_flattened_line_23663                   36398 7 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   3338 0 +     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 143410 0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    29320 0 -    437263 C
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Miniopterus_schreibersii.MinSch_scaffold_18080             36099 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1852415 0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                17821 0 -     19307 C
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    5579 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12184611 154 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 35608 1 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Megaderma_lyra.MegLyr_scaffold_4542                        15402 0 -    207569 C
e Marmota_marmota.CZRN01000018.1                          33105389 1 -  40650429 I
e Manis_pentadactyla.KN006162.1                              53022 987 -    317179 I
e Manis_javanica.JSZB01003497.1                              20877 990 +    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_8222                 92866 0 +     94391 C
e Lycaon_pictus.CM007581.1                                17957377 535 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             270196 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     8427 743 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Lasiurus_borealis.LasBor_scaffold_32767                    18915 0 -     42476 C
e Kogia_breviceps.KogBre_flattened_line_81059                  887 0 -     18011 C
e Jaculus_jaculus.JH725527.1                               8278673 121 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_34779                1141 0 -     31341 C
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7523066 1 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      85084 0 +    135385 C
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23782 0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  47172 0 +     55795 C
e Hipposideros_galeritus.HipGal_scaffold_101188               1110 0 +      9903 C
e Hipposideros_armiger.JXIK01000431.1                       112538 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112794 0 +    128679 C
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20664158 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 21891 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               244424 0 +    327341 C
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Graphiurus_murinus.GraMur_scaffold_10447                   35462 1 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            33457 1 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     611292 0 -    660261 C
e Galeopterus_variegatus.GalVar_scaffold_108840               4765 1 -      9135 I
e Galagoides_demidoff.k141_1711393                            4689 0 +     41679 C
e Fukomys_damarensis.KN121974.1                             852512 0 +   3816255 C
e Felis_nigripes.FelNig_flattened_line_20823                 11716 0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20198056 0 + 205367284 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Eubalaena_japonica.EubJap_flattened_line_31514             27310 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           13364 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               35993 651 +    498745 I
e Equus_caballus.CM000403.2                               18533964 651 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1286155 651 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2149209 0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Ellobius_talpinus.LOJH01081419.1                            3272 1 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          23351 1 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       314057 0 +    607251 C
e Eidolon_helvum.AWHC01278734.1                                746 0 +      2334 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 35526 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    38384 0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    8624 649 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  675871 642 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8632074 0 +  20541912 C
e Delphinapterus_leucas.KZ290073.1                        16813935 0 +  35494412 C
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            69504 0 +   2246927 C
e Dasyprocta_punctata.DasPun_flattened_line_15900             2011 0 -     75252 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  38182 0 +     51376 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             30616 0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_1059839               27 0 +      1008 C
e Cricetulus_griseus.LT883664.1                           11668671 0 + 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_18520                 52823 1 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           2496 0 +     23735 C
e Condylura_cristata.JH655891.1                           17550996 0 -  53390261 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1254902 0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            6483 0 -      8501 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5047 647 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                       102948 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18364066 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18351806 0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     96238 0 +    217609 C
e Castor_canadensis.CasCan_scaffold_2074                    139359 1 +    179628 I
e Carollia_perspicillata.CarPer_scaffold_92756                7074 0 -     11696 C
e Capromys_pilorides.CapPil_scaffold_65020                    3253 0 -     12242 C
e Capra_hircus.CM004588.1                                 18064403 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18833586 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18502439 535 +  63665305 I
e Canis_lupus_familiaris.chr16                            17961137 535 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9036666 537 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     1966 535 -     43241 I
e CanFam4.chr16                                           17801223 537 -  60362399 I
e Camelus_ferus.KB017975.1                                  405340 0 -   1652518 C
e Camelus_dromedarius.KN272107.1                           2337042 0 -   7040546 C
e Camelus_bactrianus.KN276810.1                           10004570 0 -  17673402 C
e Bubalus_bubalis.KI419123.1                               2823114 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18087161 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1129077 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20276523 0 +  48749331 C
e Bison_bison.KN261452.1                                    203284 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    30672 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         4517 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15194052 0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6730 0 +     43469 C
e Arctocebus_calabarensis.k141_1648548                         538 0 +      5281 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      14783 1 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_43303               855 0 -     32520 C
e Anoura_caudifer.AnoCau_scaffold_1412                      187319 0 +    412891 C
e Ammotragus_lervia.NIVO01071767.1                          679576 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     75924 121 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T
e Acomys_cahirinus.AcoCah_scaffold_12655                     73580 1 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           829437 0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                      11101 8 +     62944 TTCCTTTT
s Acinonyx_jubatus.LLWD01001279.1                           829437 2 -   1699592 gg------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 52
s Acomys_cahirinus.AcoCah_scaffold_12655                     73581 2 +     87051 GA------
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 1 I 57
s Allenopithecus_nigroviridis.k141_3361533                   18936 8 -     52922 TTCCTTTT
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         18872 8 -     28001 TTCCTTTT
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          9367 8 -     18505 TTCCTTTT
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                          10220 8 -     12518 TTCCTTTT
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             10576 8 +     51355 TTCCTTTT
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                3683 8 -     36483 TTCCTTTT
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              14136 8 +     28687 TTCCTTTT
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 2608 8 +     27940 TTCCTTTT
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            3696 8 -      9457 TTCCTTTT
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             2654 8 +     30492 TTCCTTTT
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              6871 8 +     47717 TTCCTTTT
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              3376 8 +      5663 TTCCTTTT
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             17827 8 +     50774 TTCCTTTT
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          679576 2 -   2318259 gg------
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 55
s Anoura_caudifer.AnoCau_scaffold_1412                      187319 2 +    412891 GG------
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 55
s Antilocapra_americana.AntAmePen_scaffold_43303               855 2 -     32520 GG------
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 I 56
s Aplodontia_rufa.AprRuf_scaffold_68852                      14784 2 +     20879 GG------
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 1 I 58
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6730 2 +     43469 GG------
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 56
s Ateles_geoffroyi_b.tarseq_1536                             21211067 7 -  21539123 -TCCTTTT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               45866 7 -     48001 -TCCTTTT
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 28667 7 -     30947 -TCCTTTT
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               10442 7 -     89868 -TCCTTTT
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              14824 7 -     40414 -TCCTTTT
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                22712 7 +     72325 -TCCTTTT
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15194052 2 +  23207421 gg------
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 56
s Balaenoptera_bonaerensis.DF707048.1                         4517 2 -     18090 gg------
i Balaenoptera_bonaerensis.DF707048.1                    C 0 I 56
s Beatragus_hunteri.BeaHun_scaffold_50177                    30672 2 +     34529 GG------
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 56
s Bison_bison.KN261452.1                                    203284 2 -    288883 GG------
i Bison_bison.KN261452.1                                 C 0 I 61
s Bos_indicus.CM003047.1                                  20276523 2 +  48749331 gg------
i Bos_indicus.CM003047.1                                 C 0 I 61
s Bos_mutus.JH880303.1                                     1129077 2 -   1948126 gg------
i Bos_mutus.JH880303.1                                   C 0 I 61
s Bos_taurus.CM000203.6                                   18087161 2 +  45695690 gg------
i Bos_taurus.CM000203.6                                  C 0 I 61
s Bubalus_bubalis.KI419123.1                               2823114 2 +   4408762 gg------
i Bubalus_bubalis.KI419123.1                             C 0 I 61
s Cacajao_ayresi.k141_552049                                103687 8 -    122966 TTCCTTAT
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   63190 8 +     81800 TTCCTTAT
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  32372 8 -     95584 TTCCTTAT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         56473 8 -    119600 TTCCTTAT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10004570 2 -  17673402 gg------
i Camelus_bactrianus.KN276810.1                          C 0 I 59
s Camelus_dromedarius.KN272107.1                           2337042 2 -   7040546 gg------
i Camelus_dromedarius.KN272107.1                         C 0 I 59
s Camelus_ferus.KB017975.1                                  405340 2 -   1652518 gg------
i Camelus_ferus.KB017975.1                               C 0 I 59
s Capra_aegagrus.CM003241.1                               18833586 2 +  46296322 GG------
i Capra_aegagrus.CM003241.1                              C 0 I 55
s Capra_hircus.CM004588.1                                 18064403 2 -  44709034 gg------
i Capra_hircus.CM004588.1                                C 0 I 55
s Carlito_syrichta.NW_007259797.1                           157745 2 -    496798 aa------
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                7074 2 -     11696 GG------
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 51
s Castor_canadensis.CasCan_scaffold_2074                    139360 2 +    179628 GG------
i Castor_canadensis.CasCan_scaffold_2074                 I 1 I 56
s Catagonus_wagneri.CatWag_scaffold_2839                     96238 2 +    217609 gg------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 56
s Cephalopachus_bancanus.k141_1423433                         7242 2 +     31688 aa------
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4479888 8 +   4669795 ttcctttt
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        4387 8 +     17872 TTCCTTTT
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4977 8 -     14043 TTCCTTTT
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          13075 8 +     27781 TTCCTTTT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        13236 8 -     20310 TTCCTTTT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          16208 8 +     29689 TTCCTTTT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10968 8 -     20078 TTCCTTTT
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          18879 8 -     27936 TTCCTTTT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            7754 8 -     17152 TTCCTTTT
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38827480 8 +  39242232 TTCCTTTT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226986 8 -  21565898 TTCCTTTT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       44105 8 -     53127 TTCCTTTT
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        4357 8 +     13442 TTCCTTTT
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       18901 8 -     27947 TTCCTTTT
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1928 8 +     10558 TTCCTTTT
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4933 8 +     14005 TTCCTTTT
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            6483 2 -      8501 GG------
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 I 48
s Cheracebus_lucifer.k141_49986                               2292 8 -     17098 TTCCTTAT
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              2168 8 +     17877 TTCCTTAT
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            159735 8 -    216457 TTCCTTAT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          64204 8 +     76511 TTCCTTAT
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chiropotes_israelita.k141_747660                          100816 8 +    146308 TTCCTTAT
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          32623 8 -     50570 TTCCTTAT
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18432803 8 -  18827391 TTCCTTTT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       19300 8 -     50209 TTCCTTTT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135426306 8 + 135778131 ttcctttt
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1914843 8 +   2368649 ttCCTTTT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199953085 8 + 200372422 TTCCTTTT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              41394 8 +     84244 ttcctttt
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17550996 2 -  53390261 CA------
i Condylura_cristata.JH655891.1                          C 0 I 45
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           2496 2 +     23735 ga------
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 I 114
s Cricetomys_gambianus.CriGam_scaffold_18520                 52824 2 +     63868 GA------
i Cricetomys_gambianus.CriGam_scaffold_18520             I 1 I 57
s Crocidura_indochinensis.CroInd_scaffold_1059839               27 2 +      1008 GA------
i Crocidura_indochinensis.CroInd_scaffold_1059839        C 0 I 55
s Cryptoprocta_ferox.CryFer_flattened_line_16129             30616 2 -     87169 AG------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 52
s Dasypus_novemcinctus.JH564415.1                            69504 2 +   2246927 ag------
i Dasypus_novemcinctus.JH564415.1                        C 0 I 49
s Delphinapterus_leucas.KZ290073.1                        16813935 2 +  35494412 gg------
i Delphinapterus_leucas.KZ290073.1                       C 0 I 56
s Desmodus_rotundus.KZ672289.1                             8632074 2 +  20541912 gg------
i Desmodus_rotundus.KZ672289.1                           C 0 I 55
s Eidolon_helvum.AWHC01278734.1                                746 2 +      2334 GG------
i Eidolon_helvum.AWHC01278734.1                          C 0 I 51
s Elaphurus_davidianus.JRFZ01104969.1                       314057 2 +    607251 gg------
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 56
s Ellobius_lutescens.LOEQ01008920.1                          23352 2 -    110024 AT------
i Ellobius_lutescens.LOEQ01008920.1                      I 1 I 57
s Ellobius_talpinus.LOJH01081419.1                            3273 2 +      8657 AT------
i Ellobius_talpinus.LOJH01081419.1                       I 1 I 67
s Eptesicus_fuscus.JH977646.1                              2149209 2 -  14770903 gg------
i Eptesicus_fuscus.JH977646.1                            C 0 I 55
s Erythrocebus_patas.Contig38                             21209477 8 -  21539334 TTCCTTTT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           13364 2 +    133382 gg------
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 56
s Eubalaena_japonica.EubJap_flattened_line_31514             27310 2 -     44125 gg------
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 I 56
s Felis_catus.CM001381.2                                  20239181 2 + 206538554 gg------
i Felis_catus.CM001381.2                                 C 0 I 52
s Felis_catus_fca126.CM031415.1                           20198056 2 + 205367284 gg------
i Felis_catus_fca126.CM031415.1                          C 0 I 52
s Felis_nigripes.FelNig_flattened_line_20823                 11716 2 -     36744 GG------
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 52
s Galeopterus_variegatus.GalVar_scaffold_108840               4766 2 -      9135 AG------
i Galeopterus_variegatus.GalVar_scaffold_108840          I 1 I 58
s Giraffa_tippelskirchi.LVKQ01S007888.1                     611292 2 -    660261 gg------
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 I 56
s Glis_glis.GliGli_scaffold_19807                            33458 2 +     49224 gg------
i Glis_glis.GliGli_scaffold_19807                        I 1 I 60
s Gorilla_beringei.k141_3596273                              20327 8 -     32273 TTCCTTTT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186342463 8 + 186649187 ttcctttt
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   35463 2 +     78134 GG------
i Graphiurus_murinus.GraMur_scaffold_10447               I 1 I 60
s Helogale_parvula.HelPar_flattened_line_2585               244424 2 +    327341 AG------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 52
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 21891 2 +     36099 gg------
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 I 55
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112794 2 +    128679 GG------
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 I 56
s Hipposideros_armiger.JXIK01000431.1                       112538 2 +   1711038 ga------
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 55
s Hipposideros_galeritus.HipGal_scaffold_101188               1110 2 +      9903 ga------
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 I 55
s Hoolock_leuconedys.ctg274                                    439148 8 +    630532 TTCCTTTT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  47172 2 +     55795 AG------
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 52
s Ictidomys_tridecemlineatus.JH393364.1                    7523067 2 -   7955117 CG------
i Ictidomys_tridecemlineatus.JH393364.1                  I 1 I 58
s Inia_geoffrensis.IniGeo_flattened_line_34779                1141 2 -     31341 gg------
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 I 56
s Kogia_breviceps.KogBre_flattened_line_81059                  887 2 -     18011 gc------
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 I 56
s Lagothrix_lagothricha.k141_1005387                         16869 7 -     38430 -TCCTTTT
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    18915 2 -     42476 GA------
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 55
s Lipotes_vexillifer.KE559953.1                             270196 2 -    662738 gg------
i Lipotes_vexillifer.KE559953.1                          C 0 I 56
s Lophocebus_aterrimus.ctg367                              1441435 8 +   1826925 TTCCTTTT
i Lophocebus_aterrimus.ctg367                            I 2 C 0
s Macaca_arctoides.k141_2326796                              11245 8 +     40492 TTCCTTTT
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59680499 8 +  60120075 TTCCTTTT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 17016 8 -     26193 TTCCTTTT
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            84794 8 -    114318 TTCCTTTT
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 10483 8 -     23192 TTCCTTTT
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19949 8 -     29190 TTCCTTTT
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  28527 8 +     37952 TTCCTTTT
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186843602 8 + 187317192 ttcctttt
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25462182 8 -  25927173 ttcctttt
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  84385 8 +     89720 TTCCTTTT
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                11374 8 +     20474 TTCCTTTT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  11173 8 -     14993 TTCCTTTT
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  334035 8 -    668171 TTCCTTTT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 9483 8 -     24072 TTCCTTTT
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               30116 8 -     45290 TTCCTTTT
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92866 2 +     94391 ga------
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 I 53
s Mandrillus_leucophaeus.scaffold280                      23941702 8 -  24302211 TTCCTTTT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355817 8 +    752769 TTCCTTTT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33105390 2 -  40650429 cg------
i Marmota_marmota.CZRN01000018.1                         I 1 I 57
s Megaderma_lyra.MegLyr_scaffold_4542                        15402 2 -    207569 GA------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 45
s Meriones_unguiculatus.MerUng_scaffold_7390                 35609 2 +    140813 GA------
i Meriones_unguiculatus.MerUng_scaffold_7390             I 1 I 57
s Mesoplodon_bidens.MesBid_scaffold_108144                    5579 2 +     10310 gg------
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 I 56
s Micronycteris_hirsuta.MicHir_scaffold_52381                17821 2 -     19307 gg------
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 55
s Miniopterus_natalensis.LDJU01000034.1                    1852415 2 +   8254450 gg------
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 55
s Miniopterus_schreibersii.MinSch_scaffold_18080             36099 2 +     64694 gg------
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 55
s Miopithecus_ogouensis.k141_534055                          13383 8 -     28506 TTCCTTTT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    29320 2 -    437263 gg------
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 56
s Mormoops_blainvillei.MorMeg_scaffold_1417                 143410 2 -    366855 GG------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 55
s Moschus_moschiferus.MosMos_scaffold_13123                   3338 2 +     82753 GG------
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 56
s Murina_feae.MurFea_scaffold_85699                           9164 2 +     14753 gg------
i Murina_feae.MurFea_scaffold_85699                      C 0 I 55
s Mus_caroli.LT608237.1                                   84363965 2 - 120012414 AA------
i Mus_caroli.LT608237.1                                  I 1 I 58
s Mus_musculus.chr8                                       87653465 2 - 129401213 AA------
i Mus_musculus.chr8                                      I 1 I 58
s Mus_pahari.LT608297.1                                   31358185 1 -  89631738 -A------
i Mus_pahari.LT608297.1                                  I 2 I 58
s Mus_spretus.CM004101.1                                  90755955 2 - 130317789 AA------
i Mus_spretus.CM004101.1                                 I 1 I 58
s Muscardinus_avellanarius.MusAve_scaffold_82313              6937 2 +     14296 GG------
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 1 I 59
s Myotis_brandtii.KE162005.1                                282913 2 -  10118263 gg------
i Myotis_brandtii.KE162005.1                             C 0 I 55
s Myotis_davidii.KB100139.1                                1590231 2 -   6019432 gg------
i Myotis_davidii.KB100139.1                              C 0 I 55
s Myotis_lucifugus.GL429869.1                              3906343 2 -   4330536 gg------
i Myotis_lucifugus.GL429869.1                            C 0 I 55
s Myotis_myotis.MyoMyo_scaffold_44643                          645 2 +     25416 gg------
i Myotis_myotis.MyoMyo_scaffold_44643                    C 0 I 55
s Nannospalax_galili.KL204518.1                            3931319 2 -   9623020 GG------
i Nannospalax_galili.KL204518.1                          I 7 I 61
s Nasalis_larvatus.k141_413338                               19438 8 +     21681 TTCCTTTT
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5868283 2 +   7148211 gg------
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 56
s Noctilio_leporinus.NocLep_scaffold_251                    759601 2 +    783361 GG------
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 55
s Ochotona_princeps.JH802162.1                             1367087 2 +   3988456 GA------
i Ochotona_princeps.JH802162.1                           C 0 I 52
s Odocoileus_virginianus.KZ100018.1                         146859 2 +    630418 gg------
i Odocoileus_virginianus.KZ100018.1                      C 0 I 56
s Okapia_johnstoni.LVCL01S0005463.1                          80972 2 -    150152 gg------
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 56
s Ondatra_zibethicus.OndZib_scaffold_7387                      447 2 +    140218 GT------
i Ondatra_zibethicus.OndZib_scaffold_7387                I 1 I 67
s Onychomys_torridus.OnyTor_scaffold_2986                    83372 2 +    102263 GA------
i Onychomys_torridus.OnyTor_scaffold_2986                I 1 I 67
s Orcinus_orca.KB316932.1                                  2784176 2 -  10937097 gg------
i Orcinus_orca.KB316932.1                                C 0 I 56
s Ovis_aries.CM001607.2                                   17589642 2 +  44047080 GG------
i Ovis_aries.CM001607.2                                  C 0 I 55
s Ovis_canadensis.OviCan_scaffold_2572                      177844 2 -    191736 GG------
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 I 55
s Pan_paniscus.KQ411613.1                                    48449 8 +     80009 ttcctttt
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189147314 8 + 189151597 ttcctTTT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  153252 2 +    230217 GG------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 52
s Panthera_pardus.KV860321.1                                266563 2 +  18783137 gg------
i Panthera_pardus.KV860321.1                             C 0 I 52
s Panthera_tigris.KE722367.1                               4723388 2 -   8748460 gg------
i Panthera_tigris.KE722367.1                             C 0 I 52
s Pantholops_hodgsonii.KE114653.1                          1268577 2 -   2937107 gg------
i Pantholops_hodgsonii.KE114653.1                        C 0 I 56
s Papio_anubis.CM001495.2                                183447508 8 + 183742232 ttccttTT
i Papio_anubis.CM001495.2                                I 2 C 0
s Papio_cynocephalus.k141_4307930                            11158 8 +     20448 TTCCTTTT
i Papio_cynocephalus.k141_4307930                        I 2 C 0
s Papio_hamadryas.Contig39                                20567966 8 +  20919399 TTCCTTTT
i Papio_hamadryas.Contig39                               I 2 C 0
s Papio_kindae.k141_1936966                                   9912 8 +     41871 TTCCTTTT
i Papio_kindae.k141_1936966                              I 2 C 0
s Papio_papio.k141_802527                                    13191 8 +     27711 TTCCTTTT
i Papio_papio.k141_802527                                I 2 C 0
s Papio_ursinus.k141_5274964                                  4190 8 -     11374 TTCCTTTT
i Papio_ursinus.k141_5274964                             I 2 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14693 2 -     78924 GG------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 52
s Peromyscus_maniculatus.KI615324.1                       18214108 2 -  18517816 GA------
i Peromyscus_maniculatus.KI615324.1                      I 8 I 67
s Phocoena_phocoena.PhoPho_flattened_line_24159              11245 2 +     63832 gg------
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 56
s Piliocolobus_badius.k141_1142974                            2546 8 +     68526 TTCCTTTT
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        42687 8 +     89929 ttcctttt
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            44103 8 +     51399 ttcctttt
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14300340 8 -  14605196 ttcCTTTT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             3982 2 +     22620 cg------
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 55
s Pithecia_albicans.k141_1476471                              6087 8 +     26961 TTCCTTAT
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          2215 8 +     23417 TTCCTTAT
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                6079 8 +     29694 TTCCTTAT
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          31105 8 +     52772 TTCCTTAT
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           6101 8 +     26198 TTCCTTAT
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3942632 8 +   4542175 TTCCTTAT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            6065 8 -     23490 TTCCTTAT
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610            551 2 +      7680 gg------
i Platanista_gangetica.PlaMin_flattened_line_173610      C 0 I 56
s Plecturocebus_bernhardi.k141_2549090                       10324 8 -     39866 TTCCTTAT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        19488 8 +     34906 TTCCTTAT
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       23750 8 +     87950 TTCCTTAT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     24579 8 +     88961 TTCCTTAT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         10247 8 +     39403 TTCCTTAT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          24030 8 -     87928 TTCCTTAT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         30991 8 +     60166 TTCCTTAT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      31187 8 +     67232 TTCCTTAT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          26660 8 +     90634 TTCCTTAT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          24033 8 -     89403 TTCCTTAT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189135467 8 + 189387572 ttcctttt
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9575077 8 +   9816681 TTCCTTTT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               77619 8 -     81375 TTCCTTTT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              9450 8 +     19060 TTCCTTTT
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            13242 2 -     21651 GA------
i Psammomys_obesus.NESX01036370.1                        I 1 I 57
s Pteronotus_parnellii.KE909381.1                            16893 2 -     21811 GG------
i Pteronotus_parnellii.KE909381.1                        C 0 I 55
s Pteropus_alecto.KB030862.1                              22978952 2 +  28871421 gg------
i Pteropus_alecto.KB030862.1                             C 0 I 53
s Pteropus_vampyrus.KN525825.1                             1361937 2 +   4952924 GG------
i Pteropus_vampyrus.KN525825.1                           C 0 I 53
s Puma_concolor.QAVW01001104.1                            20276451 2 -  38429054 gg------
i Puma_concolor.QAVW01001104.1                           C 0 I 52
s Pygathrix_cinerea.k141_1153803                             19431 8 -     91421 TTCCTTTT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7613558 8 +   7812017 TTCCTTTT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             19463 8 -     72585 TTCCTTTT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  8694 2 +     55207 gg------
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 56
s Rattus_norvegicus.chr16                                 53573552 2 +  90668790 TA------
i Rattus_norvegicus.chr16                                I 1 I 57
s Rhinolophus_sinicus.LVEH01000134.1                        369000 2 -   3329780 ta------
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 55
s Rhinopithecus_bieti.k119_1041714                              24 8 +      5697 TTCCTTTT
i Rhinopithecus_bieti.k119_1041714                       C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91240498 8 - 195417433 ttcctttt
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7676145 8 +   7961872 TCCCTTTT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                90026 2 -     96226 GG------
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 I 53
s Saiga_tatarica.SaiTat_scaffold_133311                       1176 2 +      9503 gg------
i Saiga_tatarica.SaiTat_scaffold_133311                  C 0 I 56
s Scalopus_aquaticus.ScaAqu_scaffold_662                    155311 2 -    313613 CA------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 53
s Semnopithecus_entellus.k141_1672505                         4300 8 -     12572 TTCCTTTT
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      31152 8 +     39453 TTCCTTTT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           11656 8 +     27826 TTCCTTTT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            11201 8 -     19483 TTCCTTTT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      4499 8 -     12762 TTCCTTTT
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           4342 8 +     13763 TTCCTTTT
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     3149 2 -     30804 GA------
i Sigmodon_hispidus.SigHis_scaffold_42075                I 1 I 57
s Sorex_araneus.JH798187.1                                13653134 2 -  18376816 GA------
i Sorex_araneus.JH798187.1                               C 0 I 55
s Spermophilus_dauricus.KZ294078.1                         1956224 2 -   3870691 Cg------
i Spermophilus_dauricus.KZ294078.1                       I 1 I 58
s Suricata_suricatta.SurSur_flattened_line_6629              20684 2 -    196729 AG------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 52
s Sus_scrofa.CM000828.4                                    6813823 2 +  69701581 gg------
i Sus_scrofa.CM000828.4                                  C 0 I 56
s Tadarida_brasiliensis.TadBra_scaffold_25820                13364 2 +     41958 gg------
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 55
s Tarsius_lariang.k141_2201908                               28239 2 +     70052 aa------
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                3036 2 -     16117 aa------
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186432816 8 + 186847797 ttcctcTT
i Theropithecus_gelada.CM009954.1                        I 2 C 0
s Tolypeutes_matacus.TolMat_scaffold_85600                    4557 2 +     18632 GG------
i Tolypeutes_matacus.TolMat_scaffold_85600               C 0 I 47
s Tonatia_saurophila.TonSau_scaffold_294                     83166 2 +    610378 gg------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 55
s Trachypithecus_auratus.k141_722599                         15238 8 -     20410 TTCCTTTT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      4363 8 -     12674 TTCCTTTT
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       15346 8 +     19930 TTCCTTTT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      11746 8 -     19997 TTCCTTTT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            51889 8 -     60166 TTCCTTTT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        19352 8 -     27529 TTCCTTTT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                        982 8 +      9229 TTCCTTTT
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          12884 8 -     21137 TTCCTTTT
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                     984 8 +      9131 TTCCTTTT
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                          950 8 -      3730 TTCCTTTT
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        29218 8 +     32220 TTCCTTTT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5943315 8 +   6242583 TTCCTTTT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       12567 8 +     20839 TTCCTTTT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2159219 2 +   4065304 AG------
i Tupaia_chinensis.KB320699.1                            C 0 I 440
s Tupaia_tana.TupTan_flattened_line_306982                    1632 2 -      4186 AG------
i Tupaia_tana.TupTan_flattened_line_306982               C 0 I 52
s Tursiops_truncatus.MRVK01000835.1                       15740429 2 +  33153633 gg------
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 56
s Uropsilus_gracilis.UroGra_scaffold_12083                   55387 2 -     77625 TA------
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 53
s Vicugna_pacos.KN270157.1                                 5374086 2 -   5488506 gg------
i Vicugna_pacos.KN270157.1                               C 0 I 59
s Xerus_inauris.XerIna_scaffold_2302                          3272 2 +    224448 gg------
i Xerus_inauris.XerIna_scaffold_2302                     I 1 I 58
s Zapus_hudsonius.ZapHud_scaffold_11398                      16810 2 +     63895 CA------
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 1 I 62
s Ziphius_cavirostris.ZipCav_flattened_line_761354             734 2 -      1267 GG------
i Ziphius_cavirostris.ZipCav_flattened_line_761354       C 0 I 56
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202 0 +      8798 C
e Galago_senegalensis.k141_631886                             7400 0 +     11339 C
e Galago_moholi.ctg2040                                     429710 0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964 2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445 0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734 0 -     33856 C
e Perodicticus_potto.k141_1186926                              597 0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219 0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 12841 537 -     43706 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_40725                    2573 51 +     27266 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              107540 0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    389823 643 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      121344 643 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Petromus_typicus.PetTyp_scaffold_221660                      871 0 -      2102 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Otocyon_megalotis.JAEUCK010005147.1                       464401 867 -    559221 I
e Oryctolagus_cuniculus.CM000791.1                        67149665 1414 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Octodon_degus.JH651603.1                                  749928 0 +  11899542 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869 0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414 0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947 0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9151314 530 -   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     73439 0 -     80779 C
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Mungos_mungo.MunMun_flattened_line_23663                   36398 7 +     37127 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184611 154 -  29670104 I
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Manis_pentadactyla.KN006162.1                              53022 987 -    317179 I
e Manis_javanica.JSZB01003497.1                              20877 990 +    737560 I
e Lycaon_pictus.CM007581.1                                17957377 535 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     8427 743 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Jaculus_jaculus.JH725527.1                               8278673 121 -   9596543 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hystrix_cristata.HysCri_scaffold_5660                      85084 0 +    135385 C
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23782 0 -    143317 C
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20664158 0 +  22651954 C
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689 0 +     41679 C
e Fukomys_damarensis.KN121974.1                             852512 0 +   3816255 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               35993 651 +    498745 I
e Equus_caballus.CM000403.2                               18533964 651 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1286155 651 +   4378816 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 35526 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    38384 0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    8624 649 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  675871 642 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasyprocta_punctata.DasPun_flattened_line_15900             2011 0 -     75252 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  38182 0 +     51376 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Cricetulus_griseus.LT883664.1                           11668671 0 + 224834208 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1254902 0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5047 647 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                       102948 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18364066 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18351806 0 -  23392119 C
e Capromys_pilorides.CapPil_scaffold_65020                    3253 0 -     12242 C
e Canis_lupus_orion.HG994398.1                            18502439 535 +  63665305 I
e Canis_lupus_familiaris.chr16                            17961137 535 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9036666 537 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     1966 535 -     43241 I
e CanFam4.chr16                                           17801223 537 -  60362399 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538 0 +      5281 C
e Allactaga_bullata.AllBul_scaffold_9566                     75924 121 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T

a score=0.000000
s hg38.chrUn_KI270753v1                                      11109 15 +     62944 A-GAAATCTT----A--TCTAA
s Acinonyx_jubatus.LLWD01001279.1                           829491 15 -   1699592 A-GAAATCCA----G--TCTAA
i Acinonyx_jubatus.LLWD01001279.1                        I 52 I 1
s Acomys_cahirinus.AcoCah_scaffold_12655                     73640  9 +     87051 A-TAAATTTA------------
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 57 I 38
s Allenopithecus_nigroviridis.k141_3361533                   18944 15 -     52922 T-GAAATCTT----A--TCTAA
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         18880 15 -     28001 T-AAAATCTT----A--TCTAA
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          9375 15 -     18505 T-AAAATCTT----A--TCTAA
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                          10228 15 -     12518 T-AAAATCTT----A--TCTAA
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             10584 15 +     51355 A-GAAATCTT----A--TCTAA
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                3691 14 -     36483 A-GAAATCT-----A--TCTAA
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              14144 15 +     28687 A-GAAATCTT----A--TCTAA
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 2616 15 +     27940 A-GAAATCTT----A--TCTAA
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            3704 15 -      9457 A-GAAATCTT----A--TCTAA
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             2662 15 +     30492 A-GAAATCTT----A--TCTAA
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              6879 15 +     47717 A-GAAATCTT----A--TCTAA
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              3384 15 +      5663 A-GAAATCTT----A--TCTAA
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             17835 15 +     50774 A-GAAATCTT----A--TCTAA
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          679633 15 -   2318259 a-gaaacctc----g--tctaa
i Ammotragus_lervia.NIVO01071767.1                       I 55 I 1
s Anoura_caudifer.AnoCau_scaffold_1412                      187376 15 +    412891 A-GAAATCTA----G--TCTAA
i Anoura_caudifer.AnoCau_scaffold_1412                   I 55 I 19
s Antilocapra_americana.AntAmePen_scaffold_43303               913 15 -     32520 A-GAAATCTA----G--TCTAA
i Antilocapra_americana.AntAmePen_scaffold_43303         I 56 I 1
s Aplodontia_rufa.AprRuf_scaffold_68852                      14844 14 +     20879 --GAAATCTA----G--TCCAA
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 58 I 29
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6788 15 +     43469 A-GAAATCTA----G--TCTAA
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 56 I 17
s Ateles_geoffroyi_b.tarseq_1536                             21211074 15 -  21539123 A-GAAATCTT----A--TCTAA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               45873 15 -     48001 A-GAAATCTT----A--TCTAA
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 28674 15 -     30947 A-GAAATCTT----A--TCTAA
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               10449 15 -     89868 A-GAAATCTT----A--TCTAA
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              14831 15 -     40414 A-GAAATCTT----A--TCTAA
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                22719 15 +     72325 A-GAAATCTT----A--TCTAA
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15194110 15 +  23207421 a-gaaatcta----g--tctaa
i Balaenoptera_acutorostrata.KI537508.1                  I 56 I 1
s Balaenoptera_bonaerensis.DF707048.1                         4575 15 -     18090 a-gaaatcta----g--tctaa
i Balaenoptera_bonaerensis.DF707048.1                    I 56 I 1
s Beatragus_hunteri.BeaHun_scaffold_50177                    30730  7 +     34529 A-GAAACC--------------
i Beatragus_hunteri.BeaHun_scaffold_50177                I 56 I 4
s Bison_bison.KN261452.1                                    203347 15 -    288883 A-GAAATCTA----G--TCTAA
i Bison_bison.KN261452.1                                 I 61 I 1
s Bos_indicus.CM003047.1                                  20276586 15 +  48749331 a-gaaatcta----g--tctaa
i Bos_indicus.CM003047.1                                 I 61 I 1
s Bos_mutus.JH880303.1                                     1129140 15 -   1948126 a-gaaatcta----g--tctaa
i Bos_mutus.JH880303.1                                   I 61 I 1
s Bos_taurus.CM000203.6                                   18087224 15 +  45695690 a-gaaatcta----g--tctaa
i Bos_taurus.CM000203.6                                  I 61 I 1
s Bubalus_bubalis.KI419123.1                               2823177 15 +   4408762 a-gaaatcta----g--tctaa
i Bubalus_bubalis.KI419123.1                             I 61 I 1
s Cacajao_ayresi.k141_552049                                103695 15 -    122966 A-GAAATCTT----A--TCTGA
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   63198 15 +     81800 A-GAAATCTT----A--TCTGA
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  32380 15 -     95584 A-GAAATCTT----A--TCTGA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         56481 15 -    119600 A-GAAATCTT----A--TCTGA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10004631 15 -  17673402 a-gaaatcta----g--ttgaa
i Camelus_bactrianus.KN276810.1                          I 59 I 1
s Camelus_dromedarius.KN272107.1                           2337103 15 -   7040546 a-gaaatcta----g--ttgaa
i Camelus_dromedarius.KN272107.1                         I 59 I 1
s Camelus_ferus.KB017975.1                                  405401 15 -   1652518 a-gaaatcta----g--ttgaa
i Camelus_ferus.KB017975.1                               I 59 I 1
s Capra_aegagrus.CM003241.1                               18833643 15 +  46296322 A-GAAACCTA----G--TCTAA
i Capra_aegagrus.CM003241.1                              I 55 I 1
s Capra_hircus.CM004588.1                                 18064460 15 -  44709034 a-gaaaccta----g--tctaa
i Capra_hircus.CM004588.1                                I 55 I 1
s Carlito_syrichta.NW_007259797.1                           157747 15 -    496798 a-aaaatcta----a--cctAA
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                7127 15 -     11696 A-GAAATCTA----G--TCTAA
i Carollia_perspicillata.CarPer_scaffold_92756           I 51 I 19
s Castor_canadensis.CasCan_scaffold_2074                    139418 10 +    179628 AATAAATCTA------------
i Castor_canadensis.CasCan_scaffold_2074                 I 56 I 291
s Catagonus_wagneri.CatWag_scaffold_2839                     96296 15 +    217609 a-gaggtcta----g--tctaa
i Catagonus_wagneri.CatWag_scaffold_2839                 I 56 I 1
s Cephalopachus_bancanus.k141_1423433                         7244 15 +     31688 a-aaaaTCTA----G--CCTAA
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4479896 15 +   4669795 t-gaAATCTT----A--TCTAA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        4395 15 +     17872 T-GAAATCTT----A--TCTAA
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           4985 15 -     14043 T-GAAATCTT----A--TCTAA
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          13083 15 +     27781 T-GAAATCTT----A--TCTAA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        13244 15 -     20310 T-GAAATCTT----A--TCTAA
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          16216 15 +     29689 T-GAAATCTT----A--TCTAA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10976 15 -     20078 T-GAAATCTT----A--TCTAA
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          18887 15 -     27936 T-GAAATCTT----A--TCTAA
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            7762 15 -     17152 T-GAAATCTT----A--TCTAA
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38827488 15 +  39242232 T-GAAATCTT----A--TCTAA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21226994 15 -  21565898 T-GAAATCTT----A--TCTAA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       44113 15 -     53127 T-GAAATCTT----A--TCTAA
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        4365 15 +     13442 T-GAAATCTT----A--TCTAA
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       18909 15 -     27947 T-GAAATCTT----A--TCTAA
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1936 15 +     10558 T-GAAATCTT----A--TCTAA
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4941 15 +     14005 T-GAAATCTT----A--TCTAA
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            6533 15 -      8501 G-GCAATGGA----G--TCTAA
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       I 48 I 39
s Cheracebus_lucifer.k141_49986                               2300 15 -     17098 A-AATTTCTT----A--TCCGA
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              2176 15 +     17877 A-AATTTCTT----A--TCCGA
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            159743 15 -    216457 A-AATTTCTT----A--TCCGA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          64212 15 +     76511 A-AATTTCTT----A--TCCGA
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chiropotes_israelita.k141_747660                          100824 15 +    146308 A-GAAATCTT----A--TCTGA
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          32631 15 -     50570 A-GAAATCTT----A--TCTGA
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18432811 15 -  18827391 T-GAAATCTT----A--TCTAA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       19308 15 -     50209 T-GAAATCTT----A--TCTAA
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135426314 15 + 135778131 t-gaAATCTT----A--TCTAA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1914851 15 +   2368649 T-GAAATCTT----A--TCTAA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199953093 15 + 200372422 T-GAAATCTT----A--TCTAA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              41402 15 +     84244 t-gaAATCTT----A--TCTAA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17551043  5 -  53390261 A-GAAA----------------
i Condylura_cristata.JH655891.1                          I 45 I 29
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           2612 15 +     23735 a-gcactcca----t--tttta
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      I 114 I 1
s Cricetulus_griseus.LT883664.1                           11668671  4 + 224834208 ------------------CTAA
i Cricetulus_griseus.LT883664.1                          C 0 I 44
s Cricetomys_gambianus.CriGam_scaffold_18520                 52883  9 +     63868 A-CAAATTTA------------
i Cricetomys_gambianus.CriGam_scaffold_18520             I 57 I 50
s Crocidura_indochinensis.CroInd_scaffold_1059839               84 15 +      1008 A-GAAATCTG----G--TCTAA
i Crocidura_indochinensis.CroInd_scaffold_1059839        I 55 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_16129             30670 15 -     87169 A-GAAATCCA----G--TCTAA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 52 I 1
s Dasypus_novemcinctus.JH564415.1                            69555 15 +   2246927 g-gcaatgga----a--tctaa
i Dasypus_novemcinctus.JH564415.1                        I 49 I 40
s Delphinapterus_leucas.KZ290073.1                        16813993 15 +  35494412 a-gaaatcta----g--tctaa
i Delphinapterus_leucas.KZ290073.1                       I 56 I 1
s Desmodus_rotundus.KZ672289.1                             8632131 15 +  20541912 a-gaagtcta----g--cctaa
i Desmodus_rotundus.KZ672289.1                           I 55 I 1
s Eidolon_helvum.AWHC01278734.1                                799 13 +      2334 A-GAAA--CA----G--CCTAA
i Eidolon_helvum.AWHC01278734.1                          I 51 I 1
s Elaphurus_davidianus.JRFZ01104969.1                       314115 15 +    607251 a-gaaaccta----g--tctaa
i Elaphurus_davidianus.JRFZ01104969.1                    I 56 I 1
s Ellobius_talpinus.LOJH01081419.1                            3342  5 +      8657 -----------------TCTAA
i Ellobius_talpinus.LOJH01081419.1                       I 67 I 39
s Ellobius_lutescens.LOEQ01008920.1                          23411  9 -    110024 A-TAAACTTA------------
i Ellobius_lutescens.LOEQ01008920.1                      I 57 I 50
s Eptesicus_fuscus.JH977646.1                              2149266 15 -  14770903 a-gaaatcta----a--tctaa
i Eptesicus_fuscus.JH977646.1                            I 55 I 19
s Erythrocebus_patas.Contig38                             21209485 15 -  21539334 T-GAAATCTT----A--TCTAA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           13422 15 +    133382 a-gaaatcta----g--tctaa
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 56 I 23
s Eubalaena_japonica.EubJap_flattened_line_31514             27368 15 -     44125 a-gaaatcta----g--tctaa
i Eubalaena_japonica.EubJap_flattened_line_31514         I 56 I 1
s Felis_catus.CM001381.2                                  20239235 15 + 206538554 a-gaaatcca----g--tctaa
i Felis_catus.CM001381.2                                 I 52 I 1
s Felis_catus_fca126.CM031415.1                           20198110 15 + 205367284 a-gaaatcca----g--tctaa
i Felis_catus_fca126.CM031415.1                          I 52 I 1
s Felis_nigripes.FelNig_flattened_line_20823                 11770 15 -     36744 a-gaaatcca----g--tctaa
i Felis_nigripes.FelNig_flattened_line_20823             I 52 I 1
s Galeopterus_variegatus.GalVar_scaffold_108840               4826 15 -      9135 a-gaaatcca----g--tctaa
i Galeopterus_variegatus.GalVar_scaffold_108840          I 58 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     611350 15 -    660261 a-gaaatcta----g--tctaa
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 56 I 1
s Glis_glis.GliGli_scaffold_19807                            33520 19 +     49224 a-gaaatctagtgag--tctaa
i Glis_glis.GliGli_scaffold_19807                        I 60 I 31
s Gorilla_beringei.k141_3596273                              20335 15 -     32273 A-GAAATCTT----A--TCTAA
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186342471 15 + 186649187 a-GAAATCTT----A--TCTAA
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   35525 19 +     78134 A-GAAATTCAGTGAG--TCTAA
i Graphiurus_murinus.GraMur_scaffold_10447               I 60 I 23
s Helogale_parvula.HelPar_flattened_line_2585               244478 15 +    327341 A-GAAATCCA----G--TCTAA
i Helogale_parvula.HelPar_flattened_line_2585            I 52 I 1
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 21948 15 +     36099 g-gaaaccta----g--tctaa
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 55 I 1
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112852 15 +    128679 a-gaaattta----g--tctaa
i Hippopotamus_amphibius.HipAmp_scaffold_9076            I 56 I 1
s Hipposideros_armiger.JXIK01000431.1                       112595 15 +   1711038 a-gaaatcta----g--tctaa
i Hipposideros_armiger.JXIK01000431.1                    I 55 I 1
s Hipposideros_galeritus.HipGal_scaffold_101188               1167 15 +      9903 a-gaaatcta----g--tctaa
i Hipposideros_galeritus.HipGal_scaffold_101188          I 55 I 1
s Hoolock_leuconedys.ctg274                                    439156 15 +    630532 A-GAAATCTC----A--TCTAA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  47226 15 +     55795 A-GAAATCCA----G--TCTAA
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 52 I 1
s Ictidomys_tridecemlineatus.JH393364.1                    7523127 15 -   7955117 A-GAAATTTA----G--CCTAA
i Ictidomys_tridecemlineatus.JH393364.1                  I 58 I 24
s Inia_geoffrensis.IniGeo_flattened_line_34779                1199 15 -     31341 a-gaaatcta----g--tctaa
i Inia_geoffrensis.IniGeo_flattened_line_34779           I 56 I 1
s Kogia_breviceps.KogBre_flattened_line_81059                  945 15 -     18011 a-gaaatcta----g--tctaa
i Kogia_breviceps.KogBre_flattened_line_81059            I 56 I 1
s Lagothrix_lagothricha.k141_1005387                         16876 15 -     38430 A-GAAATCTT----A--TCTAA
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    18972 15 -     42476 A-GAAATCTA----A--TCTAA
i Lasiurus_borealis.LasBor_scaffold_32767                I 55 I 19
s Lipotes_vexillifer.KE559953.1                             270254 15 -    662738 a-gaaatcta----g--tctaa
i Lipotes_vexillifer.KE559953.1                          I 56 I 1
s Lophocebus_aterrimus.ctg367                              1441443 15 +   1826925 T-GAAATCTT----A--TCTAA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                              11253 15 +     40492 T-GAAATCTT----A--TCTAA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59680507 15 +  60120075 T-GAAATCTT----A--TCTAA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 17024 15 -     26193 T-GAAATCTT----A--TCTAA
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            84802 15 -    114318 T-GAAATCTT----A--TCTAA
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 10491 15 -     23192 T-GAAATCTT----A--TCTAA
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19957 15 -     29190 T-GAAATCTT----A--TCTAA
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  28535 15 +     37952 T-GAAATCTT----A--TCTAA
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186843610 15 + 187317192 t-gaAATCTT----A--TCTAA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25462190 15 -  25927173 t-gaAATCTT----A--TCTAA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  84393 15 +     89720 T-GAAATCTT----A--TCTAA
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                11382 15 +     20474 T-GAAATCTT----A--TCTAA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  11181 15 -     14993 T-GAAATCTT----A--TCTAA
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  334043 15 -    668171 T-GAAATCTT----A--TCTAA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 9491 15 -     24072 T-GAAATCTT----A--TCTAA
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               30124 15 -     45290 T-GAAATCTT----A--TCTAA
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92921 13 +     94391 a-gaaa--ca----g--tctaa
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 53 I 1
s Mandrillus_leucophaeus.scaffold280                      23941710 15 -  24302211 T-GAAATCTT----A--TCTAA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355825 15 +    752769 T-GAAATCTT----A--TCTAA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33105449 15 -  40650429 a-gaaattta----a--cctaa
i Marmota_marmota.CZRN01000018.1                         I 57 I 30
s Megaderma_lyra.MegLyr_scaffold_4542                        15449 15 -    207569 A-GAAATCTA----G--TCTAA
i Megaderma_lyra.MegLyr_scaffold_4542                    I 45 I 1
s Meriones_unguiculatus.MerUng_scaffold_7390                 35668  9 +    140813 A-TAAATTTA------------
i Meriones_unguiculatus.MerUng_scaffold_7390             I 57 I 45
s Mesocricetus_auratus.KB708134.1                         12184765  1 -  29670104 T---------------------
i Mesocricetus_auratus.KB708134.1                        I 154 I 1004
s Mesoplodon_bidens.MesBid_scaffold_108144                    5637  7 +     10310 a-gaaatc--------------
i Mesoplodon_bidens.MesBid_scaffold_108144               I 56 I 4
s Micronycteris_hirsuta.MicHir_scaffold_52381                17878 15 -     19307 a-gaaatcta----g--tctaa
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 55 I 19
s Miniopterus_natalensis.LDJU01000034.1                    1852472 15 +   8254450 a-gaaatcta----g--tctag
i Miniopterus_natalensis.LDJU01000034.1                  I 55 I 19
s Miniopterus_schreibersii.MinSch_scaffold_18080             36156 15 +     64694 a-gaaatcta----g--tctag
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 55 I 19
s Miopithecus_ogouensis.k141_534055                          13391 15 -     28506 T-GAAATCTT----A--TCTAA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    29378 15 -    437263 a-gaaatcta----g--tctaa
i Monodon_monoceros.MonMon_M_scaffold_103                I 56 I 1
s Mormoops_blainvillei.MorMeg_scaffold_1417                 143467 15 -    366855 A-GAAATCTA----G--TCTAA
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 55 I 19
s Moschus_moschiferus.MosMos_scaffold_13123                   3396 15 +     82753 A-GAAATCTA----G--TCTAA
i Moschus_moschiferus.MosMos_scaffold_13123              I 56 I 1
s Mungos_mungo.MunMun_flattened_line_23663                   36405 15 +     37127 A-GAAATCCA----G--TCTAA
i Mungos_mungo.MunMun_flattened_line_23663               I 7 I 1
s Murina_feae.MurFea_scaffold_85699                           9221 16 +     14753 a-gaaatcta---AA--TCTAA
i Murina_feae.MurFea_scaffold_85699                      I 55 I 19
s Mus_caroli.LT608237.1                                   84364025  9 - 120012414 A-TAAAATTA------------
i Mus_caroli.LT608237.1                                  I 58 I 45
s Mus_musculus.chr8                                       87653525  9 - 129401213 A-TAAATTTA------------
i Mus_musculus.chr8                                      I 58 I 50
s Mus_pahari.LT608297.1                                   31358244  9 -  89631738 A-taaattta------------
i Mus_pahari.LT608297.1                                  I 58 I 50
s Mus_spretus.CM004101.1                                  90756015  9 - 130317789 A-TAAATTTA------------
i Mus_spretus.CM004101.1                                 I 58 I 50
s Muscardinus_avellanarius.MusAve_scaffold_82313              6998 19 +     14296 C-AAAATCCACTGAG--TCTAA
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 59 I 27
s Myotis_brandtii.KE162005.1                                282970 15 -  10118263 t-ggtatcta----a--tctaa
i Myotis_brandtii.KE162005.1                             I 55 I 19
s Myotis_davidii.KB100139.1                                1590288 15 -   6019432 a-gatatcta----a--tctaa
i Myotis_davidii.KB100139.1                              I 55 I 19
s Myotis_lucifugus.GL429869.1                              3906400 15 -   4330536 c-gatatcta----a--tctaa
i Myotis_lucifugus.GL429869.1                            I 55 I 19
s Myotis_myotis.MyoMyo_scaffold_44643                          702 15 +     25416 a-gatatcta----a--tctaa
i Myotis_myotis.MyoMyo_scaffold_44643                    I 55 I 19
s Nannospalax_galili.KL204518.1                            3931382  5 -   9623020 -----------------TCTAA
i Nannospalax_galili.KL204518.1                          I 61 n 61
s Nasalis_larvatus.k141_413338                               19446 15 +     21681 T-GAAATCTT----A--TCTAA
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5868341 15 +   7148211 a-gaaatcta----g--tctaa
i Neophocaena_asiaeorientalis.KZ687982.1                 I 56 I 1
s Noctilio_leporinus.NocLep_scaffold_251                    759658 15 +    783361 A-GAAAGCTG----G--CCTCA
i Noctilio_leporinus.NocLep_scaffold_251                 I 55 I 19
s Ochotona_princeps.JH802162.1                             1367141 21 +   3988456 A-CAAAAGcagtcaaaatttaa
i Ochotona_princeps.JH802162.1                           I 52 I 1
s Odocoileus_virginianus.KZ100018.1                         146917 15 +    630418 a-gaaaccta----g--tctaa
i Odocoileus_virginianus.KZ100018.1                      I 56 I 1
s Okapia_johnstoni.LVCL01S0005463.1                          81030 15 -    150152 a-gaaatcta----g--tctaa
i Okapia_johnstoni.LVCL01S0005463.1                      I 56 I 1
s Ondatra_zibethicus.OndZib_scaffold_7387                      516  5 +    140218 -----------------TCTAA
i Ondatra_zibethicus.OndZib_scaffold_7387                I 67 I 44
s Onychomys_torridus.OnyTor_scaffold_2986                    83441  5 +    102263 -----------------TCTAA
i Onychomys_torridus.OnyTor_scaffold_2986                I 67 I 44
s Orcinus_orca.KB316932.1                                  2784234 15 -  10937097 a-gaaatcta----g--tctaa
i Orcinus_orca.KB316932.1                                I 56 I 1
s Ovis_aries.CM001607.2                                   17589699 15 +  44047080 G-GAAACCTA----G--TCTAA
i Ovis_aries.CM001607.2                                  I 55 I 1
s Ovis_canadensis.OviCan_scaffold_2572                      177901 15 -    191736 G-GAAACCTA----G--TCTAA
i Ovis_canadensis.OviCan_scaffold_2572                   I 55 I 1
s Pan_paniscus.KQ411613.1                                    48457 15 +     80009 a-gaAATCTT----A--TCTAA
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189147322 15 + 189151597 A-GAAATCTT----A--TCTAA
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  153306 15 +    230217 A-GAAATCCA----G--TCTAA
i Panthera_onca.PanOnc_flattened_line_3271               I 52 I 1
s Panthera_pardus.KV860321.1                                266617 15 +  18783137 a-gaaatcca----g--tctaa
i Panthera_pardus.KV860321.1                             I 52 I 1
s Panthera_tigris.KE722367.1                               4723442 15 -   8748460 a-gaaatcca----g--tctaa
i Panthera_tigris.KE722367.1                             I 52 I 1
s Pantholops_hodgsonii.KE114653.1                          1268635 15 -   2937107 a-gaaaccta----g--tctaa
i Pantholops_hodgsonii.KE114653.1                        I 56 I 1
s Papio_anubis.CM001495.2                                183447516 15 + 183742232 T-GAAATCTT----A--TCTAA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            11166 15 +     20448 T-GAAATCTT----A--TCTAA
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567974 15 +  20919399 T-GAAATCTT----A--TCTAA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   9920 15 +     41871 T-GAAATCTT----A--TCTAA
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    13199 15 +     27711 T-GAAATCTT----A--TCTAA
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  4198 15 -     11374 T-GAAATCTT----A--TCTAA
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14747 15 -     78924 A-GAAATCCA----G--TCTAA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 52 I 1
s Peromyscus_maniculatus.KI615324.1                       18214177  5 -  18517816 -----------------TCTAA
i Peromyscus_maniculatus.KI615324.1                      I 67 I 44
s Phocoena_phocoena.PhoPho_flattened_line_24159              11303 15 +     63832 a-gaaatcta----g--tctaa
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 56 I 1
s Piliocolobus_badius.k141_1142974                            2554 10 +     68526 T-GAA---------A--TCTAA
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        42695 15 +     89929 t-gaaatctt----a--tctaa
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            44111 15 +     51399 t-gaaatctt----a--tctaa
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14300348 15 -  14605196 T-GAAATCTT----A--TCTAA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             4039 15 +     22620 a-gaaatata----a--tctaa
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 55 I 19
s Pithecia_albicans.k141_1476471                              6095 15 +     26961 A-GAAATCTT----A--TCTGA
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          2223 15 +     23417 A-GAAATCTT----A--TCTGA
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                6087 15 +     29694 A-GAAATCTT----A--TCTGA
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          31113 15 +     52772 A-GAAATCTT----A--TCTGA
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           6109 15 +     26198 A-GAAATCTT----A--TCTGA
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3942640 15 +   4542175 A-GAAATCTT----A--TCTGA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            6073 15 -     23490 A-GAAATCTT----A--TCTGA
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610            609 15 +      7680 a-gaaatcta----g--tctaa
i Platanista_gangetica.PlaMin_flattened_line_173610      I 56 I 1
s Plecturocebus_bernhardi.k141_2549090                       10332 15 -     39866 A-GAAGTCTT----A--TCTGA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        19496 15 +     34906 A-GAAGTCTT----A--TCTGA
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       23758 15 +     87950 A-GAAGTCTT----A--TCTGA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     24587 15 +     88961 A-GAAGTCTT----A--TCTGA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         10255 15 +     39403 A-GAAGTCTT----A--TCTGA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          24038 15 -     87928 A-GAAGTCTT----A--TCTGA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         30999 15 +     60166 A-GAAGTCTT----A--TCTGA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      31195 15 +     67232 A-GAAGTCTT----A--TCTGA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          26668 15 +     90634 A-GAAGTCTT----A--TCTGA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          24041 15 -     89403 A-GAAGTCTT----A--TCTGA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189135475 15 + 189387572 a-gaAATCTT----A--TCTAA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9575085 15 +   9816681 A-GAAATCTT----A--TCTAA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               77627 15 -     81375 T-GAAATCTT----A--TCTAA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              9458 15 +     19060 T-GAAATCTT----A--TCTAA
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            13301  9 -     21651 A-TAAATTTA------------
i Psammomys_obesus.NESX01036370.1                        I 57 I 46
s Pteronotus_parnellii.KE909381.1                            16950 15 -     21811 a-aaaatcta----g--ccTAA
i Pteronotus_parnellii.KE909381.1                        I 55 I 19
s Pteropus_alecto.KB030862.1                              22979007 13 +  28871421 a-gaaa--ca----a--tctaa
i Pteropus_alecto.KB030862.1                             I 53 I 1
s Pteropus_vampyrus.KN525825.1                             1361992 13 +   4952924 A-GAAA--CA----G--TCTAA
i Pteropus_vampyrus.KN525825.1                           I 53 I 1
s Puma_concolor.QAVW01001104.1                            20276505 15 -  38429054 a-gaaatcca----g--tctaa
i Puma_concolor.QAVW01001104.1                           I 52 I 1
s Pygathrix_cinerea.k141_1153803                             19439 15 -     91421 T-GAAATCTT----A--TCTAA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7613566 15 +   7812017 T-GAAATCTT----A--TCTAA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             19471 15 -     72585 T-GAAATCTT----A--TCTAA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  8752 15 +     55207 a-gaaaccta----g--tctaa
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 56 I 1
s Rattus_norvegicus.chr16                                 53573611  9 +  90668790 A-TAAATTTA------------
i Rattus_norvegicus.chr16                                I 57 I 50
s Rhinolophus_sinicus.LVEH01000134.1                        369057 15 -   3329780 a-gaaatcta----g--tctaa
i Rhinolophus_sinicus.LVEH01000134.1                     I 55 I 1
s Rhinopithecus_bieti.k119_1041714                              32 15 +      5697 T-GAAATCTT----A--TCTAA
i Rhinopithecus_bieti.k119_1041714                       C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91240506 15 - 195417433 t-GAAATCTT----A--TCTAA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7676153 15 +   7961872 T-GAAATCTT----A--TCTAA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                90081 13 -     96226 A-GAAA--CA----G--TCTAA
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 53 I 1
s Saiga_tatarica.SaiTat_scaffold_133311                       1234 15 +      9503 a-gaaatcta----g--tctaa
i Saiga_tatarica.SaiTat_scaffold_133311                  I 56 I 1
s Scalopus_aquaticus.ScaAqu_scaffold_662                    155366  5 -    313613 A-GATA----------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 53 I 34
s Semnopithecus_entellus.k141_1672505                         4308 15 -     12572 T-GAAATGTT----A--TCTAA
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      31160 15 +     39453 T-GAAATCTT----A--TCTAA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           11664 15 +     27826 T-GAAATCTT----A--TCTAA
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            11209 15 -     19483 T-GAAATCTT----A--TCTAA
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      4507 15 -     12762 T-GAAATCTT----A--TCTAA
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           4350 15 +     13763 T-GAAATCTT----A--TCTAA
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     3208  5 -     30804 -----------------TCAAA
i Sigmodon_hispidus.SigHis_scaffold_42075                I 57 I 45
s Sorex_araneus.JH798187.1                                13653191 15 -  18376816 A-GAAATCTG----G--TCTAA
i Sorex_araneus.JH798187.1                               I 55 I 41
s Spermophilus_dauricus.KZ294078.1                         1956284 15 -   3870691 a-gaaattta----g--cctaa
i Spermophilus_dauricus.KZ294078.1                       I 58 I 23
s Suricata_suricatta.SurSur_flattened_line_6629              20738 15 -    196729 A-GAAATCCA----G--TCTAA
i Suricata_suricatta.SurSur_flattened_line_6629          I 52 I 1
s Sus_scrofa.CM000828.4                                    6813881 15 +  69701581 a-gaagtcta----g--tctaa
i Sus_scrofa.CM000828.4                                  I 56 I 1
s Tadarida_brasiliensis.TadBra_scaffold_25820                13421 15 +     41958 a-taaatcta----g--tctaa
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 55 I 19
s Tarsius_lariang.k141_2201908                               28241 15 +     70052 a-aaaaTCTA----G--CCTAA
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                3038 15 -     16117 a-aaaaTCTA----G--CCTAA
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186432824 15 + 186847797 T-GAAATCTT----A--TCTAA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_85600                    4606 15 +     18632 A-GCAATGGA----G--TCCAA
i Tolypeutes_matacus.TolMat_scaffold_85600               I 47 I 39
s Tonatia_saurophila.TonSau_scaffold_294                     83223 15 +    610378 a-gaaatcta----g--tctaa
i Tonatia_saurophila.TonSau_scaffold_294                 I 55 I 1
s Trachypithecus_auratus.k141_722599                         15246 15 -     20410 T-GAAATCTT----A--TCTAA
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      4371 15 -     12674 T-GAAATCTT----A--TCTAA
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       15354 15 +     19930 T-GAAATCTT----A--TCTAA
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      11754 15 -     19997 T-GAAATCTT----A--TCTAA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            51897 15 -     60166 T-GAAATCTT----A--TCTAA
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        19360 15 -     27529 T-GAAATCTT----A--TCTAA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                        990 15 +      9229 T-GAAATCTT----A--TCTAA
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          12892 15 -     21137 T-GAAATCTT----A--TCTAA
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                     992 15 +      9131 T-GAAATCTT----A--TCTAA
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                          958 15 -      3730 T-GAAATCTT----A--TCTAA
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        29226 15 +     32220 T-GAAATCTT----A--TCTAA
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5943323 15 +   6242583 T-GAAATCTT----A--TCTAA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       12575 15 +     20839 T-GAAATCTT----A--TCTAA
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    2624 15 +     27266 A-GAAGTCTA----G--TCTCA
i Tragulus_javanicus.TraJav_scaffold_40725               I 51 I 1
s Tupaia_chinensis.KB320699.1                              2159661 15 +   4065304 A-GAAATCTA----G--TCTAA
i Tupaia_chinensis.KB320699.1                            I 440 C 0
s Tupaia_tana.TupTan_flattened_line_306982                    1686 15 -      4186 A-GAAATCTA----G--TTTAA
i Tupaia_tana.TupTan_flattened_line_306982               I 52 C 0
s Tursiops_truncatus.MRVK01000835.1                       15740487 15 +  33153633 a-gaaatcta----g--tctaa
i Tursiops_truncatus.MRVK01000835.1                      I 56 I 1
s Uropsilus_gracilis.UroGra_scaffold_12083                   55442 15 -     77625 A-TAAATTTA----A--CCTAA
i Uropsilus_gracilis.UroGra_scaffold_12083               I 53 I 34
s Vicugna_pacos.KN270157.1                                 5374147 15 -   5488506 a-gaaatcta----g--ttgaa
i Vicugna_pacos.KN270157.1                               I 59 I 1
s Xerus_inauris.XerIna_scaffold_2302                          3332 15 +    224448 a-gaaatcta----g--tctaa
i Xerus_inauris.XerIna_scaffold_2302                     I 58 I 29
s Zapus_hudsonius.ZapHud_scaffold_11398                      16874  9 +     63895 A-TAAGTCTA------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 62 I 37
s Ziphius_cavirostris.ZipCav_flattened_line_761354             792  7 -      1267 A-GAAATC--------------
i Ziphius_cavirostris.ZipCav_flattened_line_761354       I 56 I 4
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 12841 537 -     43706 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              107540  0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    389823 643 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      121344 643 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Petromus_typicus.PetTyp_scaffold_221660                      871  0 -      2102 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Otocyon_megalotis.JAEUCK010005147.1                       464401 867 -    559221 I
e Oryctolagus_cuniculus.CM000791.1                        67149665 1414 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Octodon_degus.JH651603.1                                  749928  0 +  11899542 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9151314 530 -   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     73439  0 -     80779 C
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Manis_pentadactyla.KN006162.1                              53022 987 -    317179 I
e Manis_javanica.JSZB01003497.1                              20877 990 +    737560 I
e Lycaon_pictus.CM007581.1                                17957377 535 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     8427 743 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Jaculus_jaculus.JH725527.1                               8278673 121 -   9596543 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hystrix_cristata.HysCri_scaffold_5660                      85084  0 +    135385 C
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23782  0 -    143317 C
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20664158  0 +  22651954 C
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Fukomys_damarensis.KN121974.1                             852512  0 +   3816255 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               35993 651 +    498745 I
e Equus_caballus.CM000403.2                               18533964 651 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1286155 651 +   4378816 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 35526  0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    38384  0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    8624 649 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  675871 642 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasyprocta_punctata.DasPun_flattened_line_15900             2011  0 -     75252 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  38182  0 +     51376 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1254902  0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5047 647 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                       102948  0 +    143979 C
e Cavia_porcellus.DS562891.1                              18364066  0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18351806  0 -  23392119 C
e Capromys_pilorides.CapPil_scaffold_65020                    3253  0 -     12242 C
e Canis_lupus_orion.HG994398.1                            18502439 535 +  63665305 I
e Canis_lupus_familiaris.chr16                            17961137 535 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9036666 537 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     1966 535 -     43241 I
e CanFam4.chr16                                           17801223 537 -  60362399 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Allactaga_bullata.AllBul_scaffold_9566                     75924 121 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T

a score=0.000000
s hg38.chrUn_KI270753v1                                      11124 1 +     62944 A
s Allenopithecus_nigroviridis.k141_3361533                   18959 1 -     52922 A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         18895 1 -     28001 A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          9390 1 -     18505 A
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                          10243 1 -     12518 A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             10599 1 +     51355 A
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                3705 1 -     36483 A
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              14159 1 +     28687 A
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 2631 1 +     27940 A
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            3719 1 -      9457 A
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             2677 1 +     30492 A
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              6894 1 +     47717 A
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              3399 1 +      5663 A
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             17850 1 +     50774 A
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      14887 1 +     20879 A
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 29 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21211089 1 -  21539123 A
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               45888 1 -     48001 A
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 28689 1 -     30947 A
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               10464 1 -     89868 A
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              14846 1 -     40414 A
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                22734 1 +     72325 A
i Ateles_paniscus.k141_457735                            C 0 C 0
s Cacajao_ayresi.k141_552049                                103710 1 -    122966 A
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   63213 1 +     81800 A
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  32395 1 -     95584 A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         56496 1 -    119600 A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Carlito_syrichta.NW_007259797.1                           157762 1 -    496798 A
i Carlito_syrichta.NW_007259797.1                        C 0 I 21
s Castor_canadensis.CasCan_scaffold_2074                    139719 1 +    179628 t
i Castor_canadensis.CasCan_scaffold_2074                 I 291 I 19
s Cephalopachus_bancanus.k141_1423433                         7259 1 +     31688 A
i Cephalopachus_bancanus.k141_1423433                    C 0 I 21
s Cercocebus_atys.KQ010504.1                               4479911 1 +   4669795 A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        4410 1 +     17872 A
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           5000 1 -     14043 A
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          13098 1 +     27781 A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        13259 1 -     20310 A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          16231 1 +     29689 A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10991 1 -     20078 A
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          18902 1 -     27936 A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            7777 1 -     17152 A
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38827503 1 +  39242232 A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21227009 1 -  21565898 A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       44128 1 -     53127 A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        4380 1 +     13442 A
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       18924 1 -     27947 A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1951 1 +     10558 A
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4956 1 +     14005 A
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Cheracebus_lucifer.k141_49986                               2315 1 -     17098 A
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              2191 1 +     17877 A
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            159758 1 -    216457 A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          64227 1 +     76511 A
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chiropotes_israelita.k141_747660                          100839 1 +    146308 A
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          32646 1 -     50570 A
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18432826 1 -  18827391 A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       19323 1 -     50209 A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135426329 1 + 135778131 A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1914866 1 +   2368649 A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199953108 1 + 200372422 A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              41417 1 +     84244 A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Erythrocebus_patas.Contig38                             21209500 1 -  21539334 A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               4841 1 -      9135 a
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Gorilla_beringei.k141_3596273                              20350 1 -     32273 A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186342486 1 + 186649187 A
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   35567 1 +     78134 A
i Graphiurus_murinus.GraMur_scaffold_10447               I 23 I 34
s Hoolock_leuconedys.ctg274                                    439171 1 +    630532 A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         16891 1 -     38430 A
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lophocebus_aterrimus.ctg367                              1441458 1 +   1826925 A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                              11268 1 +     40492 A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59680522 1 +  60120075 A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 17039 1 -     26193 A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            84817 1 -    114318 A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 10506 1 -     23192 A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19972 1 -     29190 A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  28550 1 +     37952 A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186843625 1 + 187317192 A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25462205 1 -  25927173 A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  84408 1 +     89720 A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                11397 1 +     20474 A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  11196 1 -     14993 A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  334058 1 -    668171 A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 9506 1 -     24072 A
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               30139 1 -     45290 A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23941725 1 -  24302211 A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355840 1 +    752769 A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33105494 1 -  40650429 a
i Marmota_marmota.CZRN01000018.1                         I 30 C 0
s Miopithecus_ogouensis.k141_534055                          13406 1 -     28506 A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              7044 1 +     14296 a
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 27 I 247
s Nasalis_larvatus.k141_413338                               19461 1 +     21681 A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Ochotona_princeps.JH802162.1                             1367163 1 +   3988456 a
i Ochotona_princeps.JH802162.1                           I 1 I 21
s Pan_paniscus.KQ411613.1                                    48472 1 +     80009 A
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189147337 1 + 189151597 A
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                183447531 1 + 183742232 A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            11181 1 +     20448 A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567989 1 +  20919399 A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   9935 1 +     41871 A
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    13214 1 +     27711 A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  4213 1 -     11374 A
i Papio_ursinus.k141_5274964                             C 0 C 0
s Piliocolobus_badius.k141_1142974                            2564 1 +     68526 A
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        42710 1 +     89929 a
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            44126 1 +     51399 a
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14300363 1 -  14605196 A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1476471                              6110 1 +     26961 A
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          2238 1 +     23417 A
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                6102 1 +     29694 A
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          31128 1 +     52772 A
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           6124 1 +     26198 A
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3942655 1 +   4542175 A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            6088 1 -     23490 A
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       10347 1 -     39866 A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        19511 1 +     34906 A
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       23773 1 +     87950 A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     24602 1 +     88961 A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         10270 1 +     39403 A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          24053 1 -     87928 A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         31014 1 +     60166 A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      31210 1 +     67232 A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          26683 1 +     90634 A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          24056 1 -     89403 A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189135490 1 + 189387572 A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9575100 1 +   9816681 A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               77642 1 -     81375 A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              9473 1 +     19060 A
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Pygathrix_cinerea.k141_1153803                             19454 1 -     91421 A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7613581 1 +   7812017 A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             19486 1 -     72585 A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_1041714                              47 1 +      5697 A
i Rhinopithecus_bieti.k119_1041714                       C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91240521 1 - 195417433 A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7676168 1 +   7961872 A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Semnopithecus_entellus.k141_1672505                         4323 1 -     12572 A
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      31175 1 +     39453 A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           11679 1 +     27826 A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            11224 1 -     19483 A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      4522 1 -     12762 A
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           4365 1 +     13763 A
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Tarsius_lariang.k141_2201908                               28256 1 +     70052 A
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                3053 1 -     16117 A
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186432839 1 + 186847797 A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                         15261 1 -     20410 A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      4386 1 -     12674 A
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       15369 1 +     19930 A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      11769 1 -     19997 A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            51912 1 -     60166 A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        19375 1 -     27529 A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                       1005 1 +      9229 A
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          12907 1 -     21137 A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                    1007 1 +      9131 A
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                          973 1 -      3730 A
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        29241 1 +     32220 A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5943338 1 +   6242583 A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       12590 1 +     20839 A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2159676 1 +   4065304 A
i Tupaia_chinensis.KB320699.1                            C 0 I 3
s Tupaia_tana.TupTan_flattened_line_306982                    1701 1 -      4186 A
i Tupaia_tana.TupTan_flattened_line_306982               C 0 I 3
s Xerus_inauris.XerIna_scaffold_2302                          3376 1 +    224448 a
i Xerus_inauris.XerIna_scaffold_2302                     I 29 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202 0 +      8798 C
e Galago_senegalensis.k141_631886                             7400 0 +     11339 C
e Galago_moholi.ctg2040                                     429710 0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964 2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Mus_pahari.LT608297.1                                   31358253 50 -  89631738 I
e Mus_spretus.CM004101.1                                  90756024 50 - 130317789 I
e Mus_musculus.chr8                                       87653534 50 - 129401213 I
e Mus_caroli.LT608237.1                                   84364034 45 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445 0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734 0 -     33856 C
e Perodicticus_potto.k141_1186926                              597 0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219 0 -      3244 C
e Ziphius_cavirostris.ZipCav_flattened_line_761354             799 4 -      1267 I
e Zapus_hudsonius.ZapHud_scaffold_11398                      16883 37 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 12841 537 -     43706 I
e Vicugna_pacos.KN270157.1                                 5374162 1 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851855 225 -   5085361 T
e Uropsilus_gracilis.UroGra_scaffold_12083                   55457 34 -     77625 I
e Tursiops_truncatus.MRVK01000835.1                       15740502 1 +  33153633 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tragulus_javanicus.TraJav_scaffold_40725                    2639 1 +     27266 I
e Tonatia_saurophila.TonSau_scaffold_294                     83238 1 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_85600                    4621 39 +     18632 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              107540 0 +    114563 C
e Tapirus_terrestris.TapTer_scaffold_755                    389823 643 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      121344 643 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                13436 19 +     41958 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6813896 1 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629              20753 1 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             32470 223 +     97271 T
e Spermophilus_dauricus.KZ294078.1                         1956299 23 -   3870691 I
e Sorex_araneus.JH798187.1                                13653206 41 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_42075                     3213 45 -     30804 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    155371 34 -    313613 I
e Saiga_tatarica.SaiTat_scaffold_133311                       1249 1 +      9503 I
e Rousettus_aegyptiacus.RouAeg_scaffold_11038                90094 1 -     96226 I
e Rhinolophus_sinicus.LVEH01000134.1                        369072 1 -   3329780 I
e Rattus_norvegicus.chr16                                 53573620 50 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  8767 1 +     55207 I
e Puma_concolor.QAVW01001104.1                            20276520 1 -  38429054 I
e Pteropus_vampyrus.KN525825.1                             1362005 1 +   4952924 I
e Pteropus_alecto.KB030862.1                              22979020 1 +  28871421 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         42014 241 +     42204 T
e Pteronotus_parnellii.KE909381.1                            16965 19 -     21811 I
e Psammomys_obesus.NESX01036370.1                            13310 46 -     21651 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Platanista_gangetica.PlaMin_flattened_line_173610            624 1 +      7680 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             4054 19 +     22620 I
e Phocoena_phocoena.PhoPho_flattened_line_24159              11318 1 +     63832 I
e Petromus_typicus.PetTyp_scaffold_221660                      871 0 -      2102 C
e Peromyscus_maniculatus.KI615324.1                       18214182 44 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14762 1 -     78924 I
e Pantholops_hodgsonii.KE114653.1                          1268650 1 -   2937107 I
e Panthera_tigris.KE722367.1                               4723457 1 -   8748460 I
e Panthera_pardus.KV860321.1                                266632 1 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  153321 1 +    230217 I
e Ovis_canadensis.OviCan_scaffold_2572                      177916 1 -    191736 I
e Ovis_aries.CM001607.2                                   17589714 1 +  44047080 I
e Otocyon_megalotis.JAEUCK010005147.1                       464401 867 -    559221 I
e Oryctolagus_cuniculus.CM000791.1                        67149665 1414 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Orcinus_orca.KB316932.1                                  2784249 1 -  10937097 I
e Onychomys_torridus.OnyTor_scaffold_2986                    83446 44 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_7387                      521 44 +    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          81045 1 -    150152 I
e Odocoileus_virginianus.KZ100018.1                         146932 1 +    630418 I
e Odobenus_rosmarus.KB229312.1                              508138 226 -   2017862 T
e Octodon_degus.JH651603.1                                  749928 0 +  11899542 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869 0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414 0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947 0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9151314 530 -   9404916 I
e Noctilio_leporinus.NocLep_scaffold_251                    759673 19 +    783361 I
e Neophocaena_asiaeorientalis.KZ687982.1                   5868356 1 +   7148211 I
e Neomonachus_schauinslandi.NINY01007730.1                20308996 226 +  31847680 T
e Nannospalax_galili.KL204518.1                            3931387 61 -   9623020 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_44643                          717 19 +     25416 I
e Myotis_lucifugus.GL429869.1                              3906415 19 -   4330536 I
e Myotis_davidii.KB100139.1                                1590303 19 -   6019432 I
e Myotis_brandtii.KE162005.1                                282985 19 -  10118263 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     73439 0 -     80779 C
e Mustela_putorius.JH418006.1                               303201 235 -  14710649 T
e Murina_feae.MurFea_scaffold_85699                           9237 19 +     14753 I
e Mungos_mungo.MunMun_flattened_line_23663                   36420 1 +     37127 I
e Moschus_moschiferus.MosMos_scaffold_13123                   3411 1 +     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 143482 19 -    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                    29393 1 -    437263 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7403 226 -      8324 T
e Miniopterus_schreibersii.MinSch_scaffold_18080             36171 19 +     64694 I
e Miniopterus_natalensis.LDJU01000034.1                    1852487 19 +   8254450 I
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                17893 19 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    5644 4 +     10310 I
e Mesocricetus_auratus.KB708134.1                         12184766 1004 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 35677 45 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365             11819 248 +     13704 T
e Megaderma_lyra.MegLyr_scaffold_4542                        15464 1 -    207569 I
e Manis_pentadactyla.KN006162.1                              53022 987 -    317179 I
e Manis_javanica.JSZB01003497.1                              20877 990 +    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_8222                 92934 1 +     94391 I
e Lycaon_pictus.CM007581.1                                17957377 535 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lipotes_vexillifer.KE559953.1                             270269 1 -    662738 I
e Lepus_americanus.LepAme_scaffold_107385                     8427 743 -     14121 I
e Leptonychotes_weddellii.KB714746.1                       3044535 225 +   3914936 T
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Lasiurus_borealis.LasBor_scaffold_32767                    18987 19 -     42476 I
e Kogia_breviceps.KogBre_flattened_line_81059                  960 1 -     18011 I
e Jaculus_jaculus.JH725527.1                               8278673 121 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_34779                1214 1 -     31341 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7523142 24 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      85084 0 +    135385 C
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23782 0 -    143317 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  47241 1 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_101188               1182 1 +      9903 I
e Hipposideros_armiger.JXIK01000431.1                       112610 1 +   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_9076               112867 1 +    128679 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20664158 0 +  22651954 C
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 21963 1 +     36099 I
e Helogale_parvula.HelPar_flattened_line_2585               244493 1 +    327341 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Glis_glis.GliGli_scaffold_19807                            33539 31 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     611365 1 -    660261 I
e Galagoides_demidoff.k141_1711393                            4689 0 +     41679 C
e Fukomys_damarensis.KN121974.1                             852512 0 +   3816255 C
e Felis_nigripes.FelNig_flattened_line_20823                 11785 1 -     36744 I
e Felis_catus_fca126.CM031415.1                           20198125 1 + 205367284 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Eubalaena_japonica.EubJap_flattened_line_31514             27383 1 -     44125 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           13437 23 +    133382 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               35993 651 +    498745 I
e Equus_caballus.CM000403.2                               18533964 651 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1286155 651 +   4378816 I
e Eptesicus_fuscus.JH977646.1                              2149281 19 -  14770903 I
e Enhydra_lutris.KZ291758.1                               16331100 241 -  41312741 T
e Ellobius_talpinus.LOJH01081419.1                            3347 39 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          23420 50 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       314130 1 +    607251 I
e Eidolon_helvum.AWHC01278734.1                                812 1 +      2334 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 35526 0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    38384 0 +     67921 C
e Diceros_bicornis.DicBicMic_scaffold_5955                    8624 649 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  675871 642 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8632146 1 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16814008 1 +  35494412 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            69570 40 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_15900             2011 0 -     75252 C
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  38182 0 +     51376 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             30685 1 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_1059839               99 1 +      1008 I
e Cricetulus_griseus.LT883664.1                           11668675 44 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 52892 50 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           2627 1 +     23735 I
e Condylura_cristata.JH655891.1                           17551048 29 -  53390261 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1254902 0 +   2543920 C
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            6548 39 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5047 647 -     25243 I
e Cavia_tschudii.CavTsc_scaffold_8919                       102948 0 +    143979 C
e Cavia_porcellus.DS562891.1                              18364066 0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18351806 0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     96311 1 +    217609 I
e Carollia_perspicillata.CarPer_scaffold_92756                7142 19 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                    3253 0 -     12242 C
e Capra_hircus.CM004588.1                                 18064475 1 -  44709034 I
e Capra_aegagrus.CM003241.1                               18833658 1 +  46296322 I
e Canis_lupus_orion.HG994398.1                            18502439 535 +  63665305 I
e Canis_lupus_familiaris.chr16                            17961137 535 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9036666 537 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     1966 535 -     43241 I
e CanFam4.chr16                                           17801223 537 -  60362399 I
e Camelus_ferus.KB017975.1                                  405416 1 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2337118 1 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10004646 1 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2823192 1 +   4408762 I
e Bos_taurus.CM000203.6                                   18087239 1 +  45695690 I
e Bos_mutus.JH880303.1                                     1129155 1 -   1948126 I
e Bos_indicus.CM003047.1                                  20276601 1 +  48749331 I
e Bison_bison.KN261452.1                                    203362 1 -    288883 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    30737 4 +     34529 I
e Balaenoptera_bonaerensis.DF707048.1                         4590 1 -     18090 I
e Balaenoptera_acutorostrata.KI537508.1                   15194125 1 +  23207421 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6803 17 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         538 0 +      5281 C
e Antilocapra_americana.AntAmePen_scaffold_43303               928 1 -     32520 I
e Anoura_caudifer.AnoCau_scaffold_1412                      187391 19 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          679648 1 -   2318259 I
e Allactaga_bullata.AllBul_scaffold_9566                     75924 121 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             81210 308 -    347723 T
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512052 224 -  29979442 T
e Acomys_cahirinus.AcoCah_scaffold_12655                     73649 38 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           829506 1 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      11125 63 +     62944 CAAATTTAGGCCAAGA-------CTTGT----T--T----A--AAAGAT---------G-TCTGGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
s Acinonyx_jubatus.LLWD01001279.1                           829507 61 -   1699592 CAAACTGAAGCCAAGA-------C-----AATA--C----A--gaagat---------g-tgtcaa-catt-t----t-t-t-gt------aatag---caaaat-ttg-a
i Acinonyx_jubatus.LLWD01001279.1                        I 1 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     73687 18 +     87051 ---------------------------------------------------------------------------------T-TC------AACAG---CAAAGT-TGG-A
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 38 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511828 13 -  29979442 ----CTCaa-------gggaaggc---------------------------------------------------------------------------------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  T 224 I 44
s Ailurus_fulgens.LNAC01001112.1                             80902 13 -    347723 ----TTCAA-------GCCaaagc---------------------------------------------------------------------------------------
i Ailurus_fulgens.LNAC01001112.1                         T 308 I 50
s Allenopithecus_nigroviridis.k141_3361533                   18960 63 -     52922 CAAATTTAGGCCaaga-------tatat----t--t----a--aaagat---------g-tcttga-catt-t-----tt-ctct------aacagcaa---aat-tgg-a
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         18896 63 -     28001 CAAATTTAGGCCaaga-------tatat----t--t----a--aaagat---------g-tcttga-cgtt-t-----tt-ctct------aacagcaa---aat-tgg-a
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          9391 63 -     18505 CAAATTTAGGCCaaga-------tatat----t--t----a--aaagat---------g-tcttga-cgtt-t-----tt-ctct------aacagcaa---aat-tgg-a
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                          10244 63 -     12518 CAAATTTAGGCCaaga-------tatat----t--t----a--aaagat---------g-tcttga-cgtt-t-----tt-ctct------aacagcaa---aat-tgg-a
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             10600 63 +     51355 CAAATTTAGGGCAAGA-------CTTAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-TTCT------GACAACAA---AAT-TGA-A
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                3706 63 -     36483 CAAATTTAGGGCAAGA-------CTTAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-TTCT------GACAACAA---AAT-TGA-A
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              14160 63 +     28687 CAAATTTAGGGCAAGA-------CTTAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-TTCT------GACAACAA---AAT-TGA-A
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 2632 63 +     27940 CAAATTTAGGGCAAGA-------CTTAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-TTCT------GACAACAA---AAT-TGA-A
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            3720 63 -      9457 CAAATTTAGGGCAAGA-------CTTAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-TTCT------GACAACAA---AAT-TGA-A
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             2678 63 +     30492 CAAATTTAGGGCAAGA-------CTTAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-TTCT------GACAACAA---AAT-TGA-A
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              6895 63 +     47717 CAAATTTAGGGCAAGA-------CTTAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-TTCT------GACAACAA---AAT-TGA-A
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              3400 63 +      5663 CAAATTTAGGGCAAGA-------CTTAT----G--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-TTCT------GACAACAA---AAT-TGA-A
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             17851 63 +     50774 CAAATTTAGGGCAAGA-------CTTAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-TTCT------GACAACAA---AAT-TGA-A
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          679649 62 -   2318259 caaactcagaccgaaa-------c------tta--tat--a--aaggag---------g-tctcta-catt-t----t-t-t-gt------aacag---caaaat-ttt-a
i Ammotragus_lervia.NIVO01071767.1                       I 1 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      187410 25 +    412891 ---------------------------------------------------------------TAG-TT---T------G-T-Gt------aatag---caaaaa-ttg-g
i Anoura_caudifer.AnoCau_scaffold_1412                   I 19 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303               929 62 -     32520 CAAACTCAGACTAAAA-------C----T--TA--A--ATA--aaggat---------g-tctcta-cact-t----t-t-t-gt------aacag---caaaat-ttg-a
i Antilocapra_americana.AntAmePen_scaffold_43303         I 1 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      14888 33 +     20879 ------------------------------------------------T---------T-TTTCAATCTTT-T-----TT-T-CT------TATAG---CAA-AT-TCC-A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6820 25 +     43469 ---------------------------------------------------------------CAG-TT---t------t-c-at------aatag---caaaaa-ttg-g
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 17 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21211090 63 -  21539123 CAAATTTAGGGCAAGA-------CTTAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-TTCT------GACAGCAA---AAT-TGA-A
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               45889 63 -     48001 CAAATTTAGGGCAAGA-------CTTAT----T--T----A--AAAGAT---------G-TCTTGA-CATA-T-----TT-TTCT------GACAGCAA---AAT-TGA-A
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 28690 63 -     30947 CAAATTTAGGGCAAGA-------CTTAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-TTCT------GACAGCAA---AAT-TGA-A
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               10465 63 -     89868 CAAATTTAGGGCAAGA-------CTTAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-TTCT------GACAGCAA---AAT-TGA-A
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              14847 63 -     40414 CAAATTTAGGGCAAGA-------CTTAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-TTCT------GACAGCAA---AAT-TGA-A
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                22735 63 +     72325 CAAATTTAGGGCAAGA-------CTTAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-TTCT------GACAGCAA---AAT-TGA-A
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15194126 62 +  23207421 taaactcagaccaaga-------c------tta--cgt--a--aacggt---------g-tctcaa-catt-t----t-t-t-gt------aatag---caaaat-ttg-a
i Balaenoptera_acutorostrata.KI537508.1                  I 1 C 0
s Balaenoptera_bonaerensis.DF707048.1                         4591 62 -     18090 taaactcagaccaaga-------c------tta--cgt--a--aacggt---------g-tctcaa-catt-t----t-t-t-gt------aatag---caaaat-ttg-a
i Balaenoptera_bonaerensis.DF707048.1                    I 1 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    30741 62 +     34529 CAAACTTGGACCAAAA-------C----T--TA--T--ATA--AAGGAA---------G-TCTCTA-CATT-TT-----T-T-GT------AACAG---CAAAAT-TTT-A
i Beatragus_hunteri.BeaHun_scaffold_50177                I 4 C 0
s Bison_bison.KN261452.1                                    203363 63 -    288883 CAAACTCAGACCAAAA-------C----T--TA--T--ATA--AAGGAG---------G-TCTCTA-CATT-TTT----T-T-GT------aacag---caaaat-ttt-a
i Bison_bison.KN261452.1                                 I 1 C 0
s Bos_indicus.CM003047.1                                  20276602 62 +  48749331 caaactcagaccaaaa-------c------tta--tat--a--aaggag---------g-tctcta-catt-t----t-t-t-gt------aacag---caaaat-ttt-a
i Bos_indicus.CM003047.1                                 I 1 C 0
s Bos_mutus.JH880303.1                                     1129156 62 -   1948126 caaactcagaccaaaa-------c------tta--tat--a--aaggag---------g-tctcta-catt-t----t-t-t-gt------aacag---caaaat-ttt-a
i Bos_mutus.JH880303.1                                   I 1 C 0
s Bos_taurus.CM000203.6                                   18087240 62 +  45695690 caaactcagaccaaaa-------c------tta--tat--a--aaggag---------g-tctcta-catt-t----t-t-t-gt------aacag---caaaat-ttt-a
i Bos_taurus.CM000203.6                                  I 1 C 0
s Bubalus_bubalis.KI419123.1                               2823193 62 +   4408762 caaactcagaccaaaa-------t------tta--tat--a--aaggag---------g-tctcta-catt-t----t-t-t-gt------aacag---caaaat-ttt-a
i Bubalus_bubalis.KI419123.1                             I 1 C 0
s Cacajao_ayresi.k141_552049                                103711 63 -    122966 CAAATTTAGGGCAAGA-------CTTAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-TTCT------GACAGCAA---AAC-TGA-A
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   63214 63 +     81800 CAAATTTAGGGCAAGA-------CTTAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-TTCT------GACAGCAA---AAC-TGA-A
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  32396 63 -     95584 CAAATTTAGGGCAAGA-------CTTAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-TTCT------GACAGCAA---AAC-TGA-A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         56497 63 -    119600 CAAATTTAGGGCAAGA-------CTTAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-TTCT------GACAGCAA---AAC-TGA-A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10004647 61 -  17673402 caaa-tcagaccaaga-------c--------t--tatatt--aaaagt---------g-cctcaa-aattct------t-t-gt------aagag---caaaat-ttg-a
i Camelus_bactrianus.KN276810.1                          I 1 C 0
s Camelus_dromedarius.KN272107.1                           2337119 61 -   7040546 caaa-tcagaccaaga-------c--------t--tatatt--aaaagt---------g-cctcaa-aattct------t-t-gt------aagag---caaaat-ttg-a
i Camelus_dromedarius.KN272107.1                         I 1 C 0
s Camelus_ferus.KB017975.1                                  405417 61 -   1652518 caaa-tcagaccaaga-------c--------t--tatatt--aaaagt---------g-cctcaa-aattct------t-t-gt------aagag---caaaat-ttg-a
i Camelus_ferus.KB017975.1                               I 1 C 0
s CanFam4.chr16                                           17801760  2 -  60362399 ------------------------------------------------------------------------------------------------------------g-a
i CanFam4.chr16                                          I 537 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     2501  2 -     43241 ------------------------------------------------------------------------------------------------------------g-a
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 535 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9037203  2 -   9314153 ------------------------------------------------------------------------------------------------------------g-a
i Canis_lupus_dingo.QKWQ01000480.1                       I 537 C 0
s Canis_lupus_familiaris.chr16                            17961672  2 -  59632846 ------------------------------------------------------------------------------------------------------------g-a
i Canis_lupus_familiaris.chr16                           I 535 C 0
s Canis_lupus_orion.HG994398.1                            18502974  2 +  63665305 ------------------------------------------------------------------------------------------------------------g-a
i Canis_lupus_orion.HG994398.1                           I 535 C 0
s Capra_aegagrus.CM003241.1                               18833659 62 +  46296322 CAAACTCAGACCGAAA-------C----T--TA--T--ATA--AAGGAG---------G-TCTCTA-CATT-TT-----T-T-GT------AACag---caaaac-ttt-a
i Capra_aegagrus.CM003241.1                              I 1 C 0
s Capra_hircus.CM004588.1                                 18064476 62 -  44709034 caaactcagaccgaaa-------c------tta--tat--a--aaggag---------g-tctcta-catt-t----t-t-t-gt------aacag---caaaac-ttt-a
i Capra_hircus.CM004588.1                                I 1 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    3253 28 -     12242 ----------------------------------------------------------------AA-TATTTT-----TA-T-CC------AATAG---TAAAAG-TGA-A
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           157784 40 -    496798 ----------------------------------------ATAAAAGAT---------G-tctcaa-catt-t-----tt-ttct------aacagc-----ATT-TAG-A
i Carlito_syrichta.NW_007259797.1                        I 21 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                7161 25 -     11696 ---------------------------------------------------------------CAA-TT---t------t-c-at------aatag---caaaaa-ttg-g
i Carollia_perspicillata.CarPer_scaffold_92756           I 19 C 0
s Castor_canadensis.CasCan_scaffold_2074                    139739 33 +    179628 ------------------------------------------------T---------T-CCTcaa-catt-t-----tt-t-ct------aatag---caaaat-tag-a
i Castor_canadensis.CasCan_scaffold_2074                 I 19 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     96312 40 +    217609 caaactcagaccaaga-------c--------c--ta-a-a--aaacgt---------g-tctcaa-cctc-t--------------------------------------
i Catagonus_wagneri.CatWag_scaffold_2839                 I 1 I 18
s Cavia_aperea.AVPZ01000300.1                             18351806 28 -  23392119 ----------------------------------------------------------------NN-NNNNNN-----NN-N-NN------NNNNN---NNNNNN-NNN-N
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18364066 28 -  23407841 ----------------------------------------------------------------aa-catttt-----ta-t-tt------aacag---caaaag-ttg-a
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                       102948 28 +    143979 ----------------------------------------------------------------AA-CATTTT-----TA-T-TT------AACAG---CAAAAG-TTG-A
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         7281 38 +     31688 ----------------------------------------A--AAAGAT---------G-TCTCAA-CATT-T-----TT-TTCT------AACAGC-----ATT-TAG-A
i Cephalopachus_bancanus.k141_1423433                    I 21 C 0
s Cercocebus_atys.KQ010504.1                               4479912 63 +   4669795 CAAATTTAGGCcaaga-------tatat----t--t----a--aaagat---------g-tCTTGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        4411 63 +     17872 CAAATTTAGGCCaaga-------tatat----t--t----a--aaagat---------g-tcttga-catt-t-----tt-ctct------aacagcaa---aat-tgg-a
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           5001 63 -     14043 CAAATTTAGGCCaaga-------tatat----t--t----a--aaagat---------g-tcttga-catt-t-----tt-ctct------aacagcaa---aat-tgg-a
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          13099 63 +     27781 CAAATTTAGGCCAAGA-------TATAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        13260 63 -     20310 CAAATTTAGGCCaaga-------tatat----t--t----a--aaagat---------g-tcttga-catt-t-----tt-ctct------aacagcaa---aat-tgg-a
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          16232 63 +     29689 CAAATTTAGGCCAAGA-------TATAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           10992 63 -     20078 CAAATTTCGGCCAAGA-------TATAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          18903 63 -     27936 CAAATTTAGGCCAAGA-------TATAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            7778 63 -     17152 CAAATTTAGGCCAAGA-------TATAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38827504 63 +  39242232 CAAATTTAGGCCAAGA-------TATAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21227010 63 -  21565898 CAAATTTAGGCCAAGA-------TATAT----T--T----A--AAAGAG---------G-TCTTGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       44129 63 -     53127 CAAATTTAGGCCaaga-------tatat----t--t----a--aaagat---------g-tcttga-catt-t-----tt-ctct------aacagcaa---aat-tgg-a
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        4381 63 +     13442 CAAATTTAGGCCAAGA-------TATAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       18925 63 -     27947 CAAATTTAGGCCAAGA-------TATAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         1952 63 +     10558 CAAAGTTAGGCCAAGA-------TATAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          4957 63 +     14005 CAAAGTTAGGCCaaga-------tatat----t--t----a--aaagat---------g-tcttga-catt-t-----tt-ctct------aacagcaa---aat-tgg-a
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            6587 23 -      8501 --------------------------------------------------------------------ttt-t------c-t-at------aatag---ccaaat-ttg-a
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       I 39 C 0
s Cheracebus_lucifer.k141_49986                               2316 63 -     17098 CAAATTTAGGGCAAGA-------CTTAC----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-TTCT------GACAGCAA---AAT-TGA-A
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              2192 63 +     17877 CAAATTTAGGGCAAGA-------CTTAC----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-TTCT------GACAGCAA---AAT-TGA-A
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            159759 63 -    216457 CAAATTTAGGGCAAGA-------CTTAC----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-TTCT------GACAGCAA---AAT-TGA-A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          64228 63 +     76511 CAAATTTAGGGCAAGA-------CTTAC----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-TTCT------GACAGCAA---AAT-TGA-A
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254902 28 +   2543920 ----------------------------------------------------------------aa-catttt-----tt-t-ct------aacag---caaaag-tta-a
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_israelita.k141_747660                          100840 63 +    146308 CAAATTTAGGGCAAGA-------CTTAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-TTCT------GACAGCAA---AAC-TGA-A
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          32647 63 -     50570 CAAATTTAGGGCAAGA-------CTTAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-TTCT------GACAGCAA---AAC-TGA-A
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18432827 63 -  18827391 CAAATTTAGGCCaaga-------tatat----t--t----a--aaagat---------g-tcttga-catt-t-----tt-ctct------aacagcaa---aat-tgg-a
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       19324 63 -     50209 CAAATTTAGGCCaaga-------tatat----t--t----a--aaagat---------g-tcttga-catt-t-----tt-ctct------aacagcaa---aat-tgg-a
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135426330 63 + 135778131 CAAATTTAGGCcaaga-------tatat----t--t----a--aaagat---------g-tCTTGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1914867 63 +   2368649 CAAATTTAGGCCAAGA-------CATAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AACAGTAA---AAT-TAG-A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199953109 63 + 200372422 CAAATTTAGGCCAAGA-------CATAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AACAGTAA---AAT-TGG-A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              41418 63 +     84244 CAAATTTAGGCCAAGA-------CATAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AACAGTAA---AAT-TGG-A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17551077 24 -  53390261 --------------------------------------------------------------------atttt------t-t-tt------aatag---caaaat-ttg-a
i Condylura_cristata.JH655891.1                          I 29 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 52942 18 +     63868 ---------------------------------------------------------------------------------t-ct------aacag---cgaagt-tgg-a
i Cricetomys_gambianus.CriGam_scaffold_18520             I 50 C 0
s Cricetulus_griseus.LT883664.1                           11668719 18 + 224834208 ---------------------------------------------------------------------------------T-CT------AATAA---CAAAGA-TGG-A
i Cricetulus_griseus.LT883664.1                          I 44 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           2628  5 +     23735 taacc----------------------------------------------------------------------------------------------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      I 1 I 454
s Crocidura_indochinensis.CroInd_scaffold_1059839              100 24 +      1008 CAGACTCTGGAAAAGA-------T----TCCTA--T----G----------------------------------------------------------------------
i Crocidura_indochinensis.CroInd_scaffold_1059839        I 1 n 1
s Cryptoprocta_ferox.CryFer_flattened_line_16129             30686 40 -     87169 CAAACTCAAGCCAAGA-------C----T-ATA--T----A--GAAGAT---------G-TCTcaa-tatt----------------------------------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 1 I 20
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  38182 28 +     51376 ----------------------------------------------------------------AA-TATTTG-----TA-T-GT------AACAG---CAAAAG-TGA-A
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900             2011 28 -     75252 ----------------------------------------------------------------AA-CATTTT-----TA-T-CT------AAATG---AAAAAG-TTG-A
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            69610 23 +   2246927 --------------------------------------------------------------------ttt-t------c-t-at------aacag---caaaat-ttg-a
i Dasypus_novemcinctus.JH564415.1                        I 40 C 0
s Delphinapterus_leucas.KZ290073.1                        16814009 62 +  35494412 taaactcagaccaaga-------c------tta--cgt--a--aatggt---------g-tctcaa-catt-t----t-t-t-gt------aatag---caaaat-ttg-a
i Delphinapterus_leucas.KZ290073.1                       I 1 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    38384 26 +     67921 -------------------------------------------------------------------CATTTT-----TT-T-CT------AACAG---CAAAAT-TTT-C
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 35526 28 -     42551 ----------------------------------------------------------------AA-CATTTT-----TA-T-TT------AACAG---CAAAAG-TTG-A
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8632147 18 +  20541912 caaactcaggtcaaga-------c--------a------------------------------------------------------------------------------
i Desmodus_rotundus.KZ672289.1                           I 1 I 25
s Eidolon_helvum.AWHC01278734.1                                813 62 +      2334 TAAACTCAGGCCaaga-------c------ttatgt----a--aaaaat---------g-tctcaa-catt-t----t-t-t-gt------aacag---caaaat-ttg-a
i Eidolon_helvum.AWHC01278734.1                          I 1 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       314131 62 +    607251 caaactcagaccaaaa-------c------tta--ta--cg--aaggag---------g-tctctg-catg-t----c-t-t-gt------aacag---caaaat-ttg-a
i Elaphurus_davidianus.JRFZ01104969.1                    I 1 C 0
s Ellobius_lutescens.LOEQ01008920.1                          23470 18 -    110024 ---------------------------------------------------------------------------------T-CT------AACAA---CAACgt-tga-a
i Ellobius_lutescens.LOEQ01008920.1                      I 50 C 0
s Ellobius_talpinus.LOJH01081419.1                            3386 12 +      8657 ----------------------------------------------------------------------------------------------AA---CAACGT-TGA-A
i Ellobius_talpinus.LOJH01081419.1                       I 39 C 0
s Eptesicus_fuscus.JH977646.1                              2149300 27 -  14770903 ---------------------------------------------------------------cat-tttt-t------t-c-at------aatag---caaaat-ttg-a
i Eptesicus_fuscus.JH977646.1                            I 19 C 0
s Enhydra_lutris.KZ291758.1                               16330859 13 -  41312741 ----CTCAA-------GCCAAGGT---------------------------------------------------------------------------------------
i Enhydra_lutris.KZ291758.1                              T 241 I 42
s Erythrocebus_patas.Contig38                             21209501 63 -  21539334 CAAATTTAGGCCAAGA-------TATAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           13460 39 +    133382 ----------------------------------------a--aacggt---------g-tctcaa-catt-t----t-t-t-gt------aatag---caaaat-ttg-a
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 23 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             27384 62 -     44125 taaactcagaccaaga-------c------tta--cgt--a--aacggt---------g-tctcaa-catt-t----t-t-t-gt------aatag---caaaat-ttg-a
i Eubalaena_japonica.EubJap_flattened_line_31514         I 1 C 0
s Felis_catus.CM001381.2                                  20239251 61 + 206538554 caaactccagccaaga-------c-----aata--c----a--gaagat---------g-tctcaa-catt-t----t-t-t-gt------aatag---caaaat-ttg-a
i Felis_catus.CM001381.2                                 I 1 C 0
s Felis_catus_fca126.CM031415.1                           20198126 61 + 205367284 caaactccagccaaga-------c-----aata--c----a--gaagat---------g-tctcaa-catt-t----t-t-t-gt------aatag---caaaat-ttg-a
i Felis_catus_fca126.CM031415.1                          I 1 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 11786 61 -     36744 caaactccagccaaga-------c-----aata--c----a--gaagat---------g-tctcaa-catt-t----t-t-t-gt------aatag---caaaat-ttg-a
i Felis_nigripes.FelNig_flattened_line_20823             I 1 C 0
s Fukomys_damarensis.KN121974.1                             852512 27 +   3816255 ----------------------------------------------------------------aa-catt-t-----tt-t-ct------aatag---caaaag-ttg-a
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               4842 62 -      9135 caaacataagccgaga-------cttac----a--t----a--aaagat---------g-tctgaa-tatt-t-----tt-t-ct------aacag---caaaat-tga-a
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     611366 62 -    660261 caaactcagaccaaaa-------c------tta--ta--ca--aaggag---------g-tctcta-catt-t----t-t-t-gt------aacag---caaaat-ttg-a
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 1 C 0
s Glis_glis.GliGli_scaffold_19807                            33570 33 +     49224 ------------------------------------------------t---------t-tttcaa-catt-t-----tt-t-ct------aacag---caaaat-tgg-a
i Glis_glis.GliGli_scaffold_19807                        I 31 C 0
s Gorilla_beringei.k141_3596273                              20351 63 -     32273 CAAATTTAGGGCAAGA-------CTTGT----T--T----A--AAAGAT---------G-TCTGGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186342487 63 + 186649187 CAAATTTAGGGCAAGA-------CTTGT----T--T----A--AAAGAT---------G-TCTGGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   35602 33 +     78134 ------------------------------------------------T---------T-TTTCAA-CATT-T-----TT-T-CT------AACAG---CAAAAT-tgg-a
i Graphiurus_murinus.GraMur_scaffold_10447               I 34 C 0
s Helogale_parvula.HelPar_flattened_line_2585               244494 61 +    327341 CAAACTCAAGCCACGA-------C----TAC-A--T----A--GAAGAT---------G-TCTCAA-CATT-TT-----T-T-GA------AATAG---CAAAAT-TTA-G
i Helogale_parvula.HelPar_flattened_line_2585            I 1 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 21964 62 +     36099 caaactcagaccaaaa-------c------tta--tat--a--aaggag---------g-tctcta-catt-t----t-t-t-gt------aacag---caaaat-ttt-a
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 1 C 0
s Heterocephalus_glaber.JH602082.1                        20664158 28 +  22651954 ----------------------------------------------------------------aa-catt-t----ttt-t-ct------aacag---taaaag-ttg-a
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112868 62 +    128679 caaacacaggccaaga-------c------tta--tat--a--aaaggt---------g-tctcaa-catt-t----t-t-t-ga------aatag---caaagt-tca-a
i Hippopotamus_amphibius.HipAmp_scaffold_9076            I 1 C 0
s Hipposideros_armiger.JXIK01000431.1                       112611 58 +   1711038 tgaactcaggccaaga-------c------ata--t----a--aaaggt---------g-tctcaa-catt-t----t-t----t------aatag---caaaat-ttg-a
i Hipposideros_armiger.JXIK01000431.1                    I 1 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188               1183 58 +      9903 tgaactcaggccaaga-------c------ata--t----a--aaaggt---------g-tctcaa-catt-t----t-t----t------aatag---caaatt-ttg-a
i Hipposideros_galeritus.HipGal_scaffold_101188          I 1 C 0
s Hoolock_leuconedys.ctg274                                    439172 63 +    630532 CAAATTTAGGCCAAGA-------CTTGT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  47242 56 +     55795 CAAACTTA-----AGA-------C----T-ATA--A----A--GAAGAT---------A-TCTCAA-CATT-TT-----T-T-GT------AATAG---CAAAAT-TTT-A
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 1 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23782 28 -    143317 ----------------------------------------------------------------AA-CATTTT-----TA-T-TT------AACAG---CAAAAG-TTG-A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      85084 28 +    135385 ----------------------------------------------------------------AA-TATGTT-----TT-T-CT------AACAG---CTAAAC-TTG-A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7523166 16 -   7955117 -------------------------------------------------------------------------------------------cacag---caaaat-tttaa
i Ictidomys_tridecemlineatus.JH393364.1                  I 24 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                1215 62 -     31341 taaactcagaccaaga-------c------tta--ggt--a--aatggt---------g-tctcaa-catg-t----t-t-t-gt------aatag---caaaat-ttg-a
i Inia_geoffrensis.IniGeo_flattened_line_34779           I 1 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                  961 62 -     18011 taaactcagaccaaga-------c------tta--cat--a--aacagt---------g-tctcaa-catt-t----t-t-t-gt------aatag---caaaat-ttg-a
i Kogia_breviceps.KogBre_flattened_line_81059            I 1 C 0
s Lagothrix_lagothricha.k141_1005387                         16892 63 -     38430 CAAATTTAGGGCAAGA-------CTTCT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-TTCT------GACAGCAA---AAT-TGA-A
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    19006 26 -     42476 ---------------------------------------------------------------CAC-t-tt-t------t-c-at------aatag---caaatt-ttg-a
i Lasiurus_borealis.LasBor_scaffold_32767                I 19 C 0
s Leptonychotes_weddellii.KB714746.1                       3044310 12 +   3914936 ----CTCAA--------GCCAAAC---------------------------------------------------------------------------------------
i Leptonychotes_weddellii.KB714746.1                     T 225 I 45
s Lipotes_vexillifer.KE559953.1                             270270 62 -    662738 taaactcagaccaaga-------c------tta--cgt--a--aatggt---------g-tctcaa-catt-t----t-t-t-gt------aatag---caaaat-ttg-g
i Lipotes_vexillifer.KE559953.1                          I 1 C 0
s Lophocebus_aterrimus.ctg367                              1441459 63 +   1826925 CAAATTTAGGCCaaga-------tatat----t--t----a--aaagat---------g-tcttga-catt-t-----tt-ctct------aacagcaa---aat-tgg-a
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17957912  2 -  59628241 ------------------------------------------------------------------------------------------------------------g-a
i Lycaon_pictus.CM007581.1                               I 535 C 0
s Macaca_arctoides.k141_2326796                              11269 63 +     40492 CAAATTTAGGCCaaga-------tatat----t--t----a--aaagat---------g-tcttga-catt-t-----tt-ctct------aacagcaa---aat-tgg-a
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59680523 63 +  60120075 CAAATTTAGGCCAAGA-------TATAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AACAGCTA---AAT-TGG-A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 17040 63 -     26193 CAAATTTAGGCCaaga-------tatat----t--t----a--aaagat---------g-tcttga-catt-t-----tt-ctct------aacagcaa---aat-tgg-a
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            84818 63 -    114318 CAAATTTAGGCCaaga-------tatat----t--t----a--aaagat---------g-tcttga-catt-t-----tt-ctct------aacagcaa---aat-tgg-a
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 10507 63 -     23192 CAAATTTAGGCCaaga-------tatat----t--t----a--aaagat---------g-tcttga-catt-t-----tt-ctct------aacagcaa---aat-tgg-a
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                19973 63 -     29190 CAAATTTAGGCCaaga-------tatat----t--t----a--aaagat---------g-tcttga-catt-t-----tt-ctct------aacagcaa---aat-tgg-a
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  28551 63 +     37952 CAAATTTAGGCCaaga-------tatat----t--t----a--aaagat---------g-tcttga-catt-t-----tt-ctct------aacagcaa---aat-tgg-a
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186843626 63 + 187317192 CAAATTTAGGCcaaga-------tatat----t--t----a--aaagat---------g-tCTTGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25462206 63 -  25927173 CAAATTTAGGCcaaga-------tatat----t--t----a--aaagat---------g-tCTTGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  84409 63 +     89720 CAAATTTAGGCCaaga-------tatat----t--t----a--aaagat---------g-tcttga-catt-t-----tt-ctct------aacagcaa---aat-tgg-a
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                11398 63 +     20474 CAAATTTAGGCCAAGA-------TATAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  11197 63 -     14993 CAAATTTAGGCCaaga-------tatat----t--t----a--aaagat---------g-tcttga-catt-t-----tt-ctct------aacagcaa---aat-tgg-a
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  334059 63 -    668171 CAAATTTAGGCCaaga-------tatat----t--t----a--aaagat---------g-tcttga-catt-t-----tt-ctct------aacagcaa---aat-tgg-a
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 9507 63 -     24072 CAAATTTAGGCCaaga-------tatat----t--t----a--aaagat---------g-tcttga-catt-t-----tt-ctct------aacagcaa---aat-tgg-a
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               30140 63 -     45290 CAAATTTAGGCCaaga-------tatat----t--t----a--aaagat---------g-tcttga-catt-t-----tt-ctct------aacagcaa---aat-tgg-a
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92935 62 +     94391 caaactcaggccaaga-------c------ttatgt----a--aaaagt---------g-tctcaa-catt-t----t-t-t-gt------aacag---aaaaat-ttg-a
i Macroglossus_sobrinus.MacSob_scaffold_8222             I 1 C 0
s Mandrillus_leucophaeus.scaffold280                      23941726 63 -  24302211 CAAATTTAGGCCaaga-------tatat----t--t----a--aaagat---------g-tcttga-catt-t-----tt-ctct------aacagcaa---aat-tgg-a
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355841 63 +    752769 CAAATTTAGGCCaaga-------tatat----t--t----a--aaagat---------g-tcttga-catt-t-----tt-ctct------aacagcaa---aat-tgg-a
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33105495 33 -  40650429 ------------------------------------------------a---------t-ttttaa-att--t---tgtt-t-ct------cacag---caaaat-ttt--
i Marmota_marmota.CZRN01000018.1                         C 0 I 1
s Megaderma_lyra.MegLyr_scaffold_4542                        15465 59 -    207569 TAAACTCAGGCTAaga-------c------gta--c----a--aaaagt---------g-tcttga-catt-t------t-t-gt------aatag---caaaat-ttg-a
i Megaderma_lyra.MegLyr_scaffold_4542                    I 1 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 35722 18 +    140813 ---------------------------------------------------------------------------------T-TT------AAGAA---CAAGGT-TGG-C
i Meriones_unguiculatus.MerUng_scaffold_7390             I 45 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             11571 13 +     13704 ----CTCAA-------GCCAAGGT---------------------------------------------------------------------------------------
i Mellivora_capensis.MelCap_flattened_line_69365         T 248 I 42
s Mesoplodon_bidens.MesBid_scaffold_108144                    5648 62 +     10310 taaactcagaccaaga-------c------tta--cgt--a--aatggt---------g-tctcaa-catt-t----t-t-t-gt------aatag---caaaat-ttg-a
i Mesoplodon_bidens.MesBid_scaffold_108144               I 4 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                17912 25 -     19307 ---------------------------------------------------------------CGG-TT---t------t-t-gt------aatag---caaaaa-ctg-g
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 19 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1852506 26 +   8254450 ---------------------------------------------------------------CGT-TT-T-T------T-C-AT------AAgag---taaaat-ttg-a
i Miniopterus_natalensis.LDJU01000034.1                  I 19 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             36190 26 +     64694 ---------------------------------------------------------------CGT-TT-T-T------T-C-AT------AAGAG---TAAAAT-TTG-A
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 19 C 0
s Miopithecus_ogouensis.k141_534055                          13407 63 -     28506 CAAATTTAGGCCAAGA-------TATAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         7177 13 -      8324 ----CTCAA-------GCCAAGGC---------------------------------------------------------------------------------------
i Mirounga_angustirostris.MirAng_flattened_line_93702    T 226 I 45
s Monodon_monoceros.MonMon_M_scaffold_103                    29394 62 -    437263 taaactcagaccaaga-------c------tta--cgt--a--aatggt---------g-tctcaa-catt-t----t-t-t-gt------aatag---caaaat-ttg-a
i Monodon_monoceros.MonMon_M_scaffold_103                I 1 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 143501 25 -    366855 ---------------------------------------------------------------CAG-TT---t------t-t-gt------aatag---caaaga-tgg-a
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 19 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   3412 62 +     82753 CAAACTCAGACCAAAA-------C----T--TA--T--ATA--AAGGAG---------G-TCTCTA-catt-t----c-t-t-gt------aacag---taaaat-ttg-a
i Moschus_moschiferus.MosMos_scaffold_13123              I 1 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   36421 61 +     37127 CAAACTCAAGCCAAGA-------C----T-ATA--T----A--GAAGAT---------G-TCTCAA-CATT-TT-----T-T-GT------AATAG---CAAAAT-TTA-G
i Mungos_mungo.MunMun_flattened_line_23663               I 1 C 0
s Murina_feae.MurFea_scaffold_85699                           9256 27 +     14753 ---------------------------------------------------------------TAT-gttt-t------t-c-ac------aatag---caaaat-ttg-a
i Murina_feae.MurFea_scaffold_85699                      I 19 C 0
s Mus_caroli.LT608237.1                                   84364079 18 - 120012414 ---------------------------------------------------------------------------------A-CT------ACCAG---TAAAgt-tag-a
i Mus_caroli.LT608237.1                                  I 45 C 0
s Mus_musculus.chr8                                       87653584 18 - 129401213 ---------------------------------------------------------------------------------t-ct------accaa---taaagt-tag-a
i Mus_musculus.chr8                                      I 50 C 0
s Mus_pahari.LT608297.1                                   31358303 18 -  89631738 ---------------------------------------------------------------------------------t-ct------accaa---taaagt-tag-a
i Mus_pahari.LT608297.1                                  I 50 C 0
s Mus_spretus.CM004101.1                                  90756074 18 - 130317789 ---------------------------------------------------------------------------------T-CT------ACCaa---taaagt-tag-a
i Mus_spretus.CM004101.1                                 I 50 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              7292 32 +     14296 ------------------------------------------------t---------t-ttT-AA-CATG-T-----TT-T-CT------AGCAA---CAAAAT-TGG-A
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 247 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     73439 28 -     80779 ----------------------------------------------------------------AA-TATCTT-----TA-T-TT------AATAG---CAAAAG-TGA-A
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                283004 27 -  10118263 ---------------------------------------------------------------cct-tctt-t------t-c-at------aatag---caaaat-ttg-a
i Myotis_brandtii.KE162005.1                             I 19 C 0
s Myotis_davidii.KB100139.1                                1590322 27 -   6019432 ---------------------------------------------------------------cct-tctt-t------t-c-at------aatag---caaaat-ttg-a
i Myotis_davidii.KB100139.1                              I 19 C 0
s Myotis_lucifugus.GL429869.1                              3906434 27 -   4330536 ---------------------------------------------------------------cct-tctt-t------t-c-at------aatag---caaaat-ttg-a
i Myotis_lucifugus.GL429869.1                            I 19 C 0
s Myotis_myotis.MyoMyo_scaffold_44643                          736 27 +     25416 ---------------------------------------------------------------cct-tctt-t------t-c-at------aacag---aaaaat-ttg-a
i Myotis_myotis.MyoMyo_scaffold_44643                    I 19 C 0
s Nannospalax_galili.KL204047.1                            2039147 32 -   3037898 ------------------------------------------------T---------G-Tctcaa-tatt-t------t-t-ct------aaaag---caaaat-tag-a
i Nannospalax_galili.KL204047.1                          I 100 C 0
s Mustela_putorius.JH418006.1                               302966 13 -  14710649 ----CTCAA-------GCCAAGGT---------------------------------------------------------------------------------------
i Mustela_putorius.JH418006.1                            T 235 I 42
s Nasalis_larvatus.k141_413338                               19462 63 +     21681 CAAATTTAGGCCaaga-------catat----t--t----a--aaagat---------g-tcttga-catt-t-----tt-ctct------aacagcaa---aat-tgg-a
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308770 13 +  31847680 ----CTCAA-------GCCAAGGC---------------------------------------------------------------------------------------
i Neomonachus_schauinslandi.NINY01007730.1               T 226 I 45
s Neophocaena_asiaeorientalis.KZ687982.1                   5868357 62 +   7148211 taaactcagaccaaga-------c------tta--cgt--a--aatggt---------g-tctcaa-catt-t----t-t-t-gt------aatag---caaaat-ttg-a
i Neophocaena_asiaeorientalis.KZ687982.1                 I 1 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    759692 25 +    783361 ---------------------------------------------------------------CAG-TT---T------T-C-AT------AACAG---CACAGA-TTG-A
i Noctilio_leporinus.NocLep_scaffold_251                 I 19 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9151844  2 -   9404916 ------------------------------------------------------------------------------------------------------------g-a
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 530 C 0
s Ochotona_princeps.JH802162.1                             1367185 32 +   3988456 ------------------------------------------------g---------t-ctcC-A-AATT-T-----TT-T-CT------AACAG---caaaat-tgg-a
i Ochotona_princeps.JH802162.1                           I 21 C 0
s Octodon_degus.JH651603.1                                  749928 29 +  11899542 ----------------------------------------------------------------aa-tacttt-----ca-t-g-acaaacaacag---ctaaag------
i Octodon_degus.JH651603.1                               C 0 I 533
s Odobenus_rosmarus.KB229312.1                              507912 13 -   2017862 ----CTCAC-------GCCAAGGC---------------------------------------------------------------------------------------
i Odobenus_rosmarus.KB229312.1                           T 226 I 45
s Odocoileus_virginianus.KZ100018.1                         146933 62 +    630418 caaacttagaccaaaa-------c------tta--tat--g--aaggag---------g-tctcta-catg-t----c-t-t-gt------aacag---caaaat-ttg-a
i Odocoileus_virginianus.KZ100018.1                      I 1 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          81046 62 -    150152 caaactcagtccaaaa-------c------tta--tat--a--aaggag---------g-tctcta-tatt-t----t-t-t-gt------aacag---caaaat-ttg-a
i Okapia_johnstoni.LVCL01S0005463.1                      I 1 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                      565 15 +    140218 ---------------------------------------------------------------------------------T-CT------AAC------AATGC-TGA-A
i Ondatra_zibethicus.OndZib_scaffold_7387                I 44 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    83490 18 +    102263 ---------------------------------------------------------------------------------T-CT------AACAA---TCCAGT-TGA-A
i Onychomys_torridus.OnyTor_scaffold_2986                I 44 C 0
s Orcinus_orca.KB316932.1                                  2784250 62 -  10937097 taaactcagaccaaga-------c------tta--cgt--a--aatggt---------g-tctcaa-catt-t----t-t-t-gt------aatag---caaaat-ttg-a
i Orcinus_orca.KB316932.1                                I 1 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       465268  2 -    559221 ------------------------------------------------------------------------------------------------------------g-a
i Otocyon_megalotis.JAEUCK010005147.1                    I 867 C 0
s Ovis_aries.CM001607.2                                   17589715 62 +  44047080 CAAACTCAGACCAAAA-------C----T--TA--T--ATA--AAGGAG---------G-TCTCTA-CATT-TT-----T-T-Gt------aacag---caaaat-ttt-a
i Ovis_aries.CM001607.2                                  I 1 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      177917 62 -    191736 CAAACTCAGACCGAAA-------C----T--TA--T--ATA--AAGGAG---------G-TCTCTA-CATT-TT-----T-T-GT------AACAG---CGAAAT-TTT-A
i Ovis_canadensis.OviCan_scaffold_2572                   I 1 C 0
s Pan_paniscus.KQ411613.1                                    48473 63 +     80009 CAAATTTAGGCCAAGA-------CTTGT----T--T----A--AAAGAT---------G-TCTGGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189147338 64 + 189151597 CAAATTTAGGCCAAGA-------CTTGT----T--T----A--AAAGAT---------G-TCTGGA-CATT-T-----TTTCTCT------AACAgcaa---aat-tgg-a
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  153322 61 +    230217 CAAACTCCAGCCAaga-------c-----aata--c----a--gaagat---------g-tctcaa-cact-t----t-t-t-gt------aatag---caaaat-ttg-a
i Panthera_onca.PanOnc_flattened_line_3271               I 1 C 0
s Panthera_pardus.KV860321.1                                266633 61 +  18783137 caaactccagccaaga-------c-----aata--c----a--gaagat---------g-tctcaa-cact-t----t-t-t-gt------aatag---caaaat-ttg-a
i Panthera_pardus.KV860321.1                             I 1 C 0
s Panthera_tigris.KE722367.1                               4723458 61 -   8748460 caaactccagccaaga-------c-----aata--c----a--gaagat---------g-tctcaa-catt-t----t-t-t-gt------aatag---caaaat-ttg-a
i Panthera_tigris.KE722367.1                             I 1 C 0
s Pantholops_hodgsonii.KE114653.1                          1268651 62 -   2937107 caaactcagaccgaaa-------c------tta--tat--a--aaggag---------g-tctcta-catt-t----t-t-t-gt------aacag---caagat-ttt-a
i Pantholops_hodgsonii.KE114653.1                        I 1 C 0
s Papio_anubis.CM001495.2                                183447532 63 + 183742232 CAAATTTAGGCcaaga-------tatat----t--t----a--aaagat---------g-tCTTGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            11182 63 +     20448 CAAATTTAGGCCAAGA-------TATAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20567990 63 +  20919399 CAAATTTAGGCCaaga-------tatat----t--t----a--aaagat---------g-tcttga-catt-t-----tt-ctct------aacagcaa---aat-tgg-a
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   9936 63 +     41871 CAAATTTAGGCCAAGA-------TATAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    13215 63 +     27711 CAAATTTAGGCCaaga-------tatat----t--t----a--aaagat---------g-tcttga-catt-t-----tt-ctct------aacagcaa---aat-tgg-a
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  4214 63 -     11374 CAAATTTAGGCCaaga-------tatat----t--t----a--aaagat---------g-tcttga-catt-t-----tt-ctct------aacagcaa---aat-tgg-a
i Papio_ursinus.k141_5274964                             C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18214226 18 -  18517816 ---------------------------------------------------------------------------------T-CT------AACAA---CTCAGT-TGA-A
i Peromyscus_maniculatus.KI615324.1                      I 44 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14763 41 -     78924 CAAACTCAAGCCAAGA-------C-----CATA--T----A--GAGGAT---------G-TGTCAA-CGTT-T--------------------------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 1 I 4
s Petromus_typicus.PetTyp_scaffold_221660                      871 28 -      2102 ----------------------------------------------------------------AA-CATTTC-----TT-T-CT------AAGAG---CAAAAG-TGG-C
i Petromus_typicus.PetTyp_scaffold_221660                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              11319 62 +     63832 taaactcagaccaaga-------c------tta--cgt--a--aatggt---------g-tctcaa-catt-t----t-t-t-gt------aatag---caaaat-ttg-a
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 1 C 0
s Piliocolobus_badius.k141_1142974                            2565 72 +     68526 CAAATTTAGGCCAAGA-------CATAT----T--T----A--AAAGATGTCTTAGATG-TCTTGA-CATT-T-----TT-CTCT------AACAGTAA---AAT-TGG-A
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        42711 63 +     89929 caaatttaggccaaga-------catat----t--t----a--aaagat---------g-tcttga-catt-t-----tt-ctct------aacagtaa---aat-tgg-a
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            44127 63 +     51399 caaatttaggccaaga-------catat----t--t----a--aaagat---------g-tcttga-catt-t-----tt-ctct------aacagtaa---aat-tgg-a
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14300364 62 -  14605196 CAAATTTAGGCC-AGA-------CATAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AACAGTAA---AAT-TGG-A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             4073 27 +     22620 ---------------------------------------------------------------CAT-TTTT-T------C-C-AT------AATAG---CAAAAT-TTG-A
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 19 C 0
s Pithecia_albicans.k141_1476471                              6111 63 +     26961 CAAATTTAGGGCAAGA-------CTTAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-TTCT------GACAGCAA---AAC-TGA-A
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          2239 63 +     23417 CAAATTTAGGGCAAGA-------CTTAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-TTCT------GACAGCAA---AAC-TGA-A
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                6103 63 +     29694 CAAATTTAGGGCAAGA-------CTTAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-TTCT------GACAGCAA---AAC-TGA-A
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          31129 63 +     52772 CAAATTTAGGGCAAGA-------CTTAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-TTCT------GACAGCAA---AAC-TGA-A
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           6125 63 +     26198 CAAATTTAGGGCAAGA-------CTTAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-TTCT------GACAGCAA---AAC-TGA-A
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3942656 63 +   4542175 CAAATTTAGGGCAAGA-------CTTAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-TTCT------GACAGCAA---AAC-TGA-A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            6089 63 -     23490 CAAATTTAGGGCAAGA-------CTTAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-TTCT------GACAGCAA---AAC-TGA-A
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610            625 62 +      7680 taaactcagaccaaga-------c------tta--cat--a--aacagt---------g-tctcaa-catt-t----t-t-t-gt------aatag---caaaat-ttg-a
i Platanista_gangetica.PlaMin_flattened_line_173610      I 1 C 0
s Plecturocebus_bernhardi.k141_2549090                       10348 63 -     39866 TAAATTTAGGGCAAGA-------CTTAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-TTCT------GACAGCAA---AAT-TGT-A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        19512 63 +     34906 TAAATTTAGGGCAAGA-------CTTAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-TTCT------GACAGCAA---AAT-TGT-A
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       23774 63 +     87950 TAAATTTAGGGCAAGA-------CTTAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-TTCT------GACAGCAA---AAT-TGT-A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     24603 63 +     88961 TAAATTTAGGGCAAGA-------CTTAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-TTCT------GACAGCAA---AAT-TGT-A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         10271 63 +     39403 TAAATTTAGGGCAAGA-------CTTAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-TTCT------GACAGCAA---AAT-TGT-A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          24054 63 -     87928 TAAATTTAGGGCAAGA-------CTTAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-TTCT------GACAGCAA---AAT-TGT-A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         31015 63 +     60166 TAAATTTAGGGCAAGA-------CTTAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-TTCT------GACAGCAA---AAT-TGT-A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      31211 63 +     67232 TAAATTTAGGGCAAGA-------CTTAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-TTCT------GACAGCAA---AAT-TGT-A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          26684 63 +     90634 TAAATTTAGGGCAAGA-------CTTAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-TTCT------GACAGCAA---AAT-TGT-A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          24057 63 -     89403 TAAATTTAGGGCAAGA-------CTTAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-TTCT------GACAGCAA---AAT-TGT-A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189135491 63 + 189387572 CAAATTTAGGCCAAGA-------CTTAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9575101 63 +   9816681 CAAATTTAGGCCAAGA-------CTTAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               77643 63 -     81375 CAAATTTAGGCCAAGA-------CATAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              9474 63 +     19060 CAAATTTAGGCCAAGA-------CATAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            13356 18 -     21651 ---------------------------------------------------------------------------------T-CT------AAGAA---CAAGGT-Tgg-c
i Psammomys_obesus.NESX01036370.1                        I 46 C 0
s Pteronotus_parnellii.KE909381.1                            16984 25 -     21811 ---------------------------------------------------------------CAG-CT---T------T-C-GA------aatag---caaaaa-ctg-a
i Pteronotus_parnellii.KE909381.1                        I 19 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41773 13 +     42204 ----CTCAA-------GCCAAGGT---------------------------------------------------------------------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_31117     T 241 I 42
s Pteropus_alecto.KB030862.1                              22979021 62 +  28871421 caaactcaggccaaga-------c------gtatgt----a--aaaagt---------g-tctcaa-catt-t----t-t-t-gt------aacag---caaaat-ttg-a
i Pteropus_alecto.KB030862.1                             I 1 C 0
s Pteropus_vampyrus.KN525825.1                             1362006 62 +   4952924 CAAACTCAGGCCaaga-------c------gtatgt----a--aaaagt---------g-tctcaa-catt-t----t-t-t-gt------aacag---caaaat-ttg-a
i Pteropus_vampyrus.KN525825.1                           I 1 C 0
s Puma_concolor.QAVW01001104.1                            20276521 61 -  38429054 caaactcaagccaaga-------c-----aata--c----a--gaagat---------g-tgtcaa-catt-t----t-t-t-gt------aatag---caaaat-ttg-a
i Puma_concolor.QAVW01001104.1                           I 1 C 0
s Pygathrix_cinerea.k141_1153803                             19455 62 -     91421 CAAATTTAGGCCAAGA-------CATAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AA-AGCaa---aat-tgg-a
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7613582 62 +   7812017 CAAATTTAGGCCAAGA-------CATAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AA-AGCAA---AAT-TGG-A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             19487 62 -     72585 CAAATTTAGGCCAAGA-------CATAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AA-AGCaa---aat-tgg-a
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  8768 62 +     55207 caaactcagaccaaaa-------c------tta--tat--g--aaggag---------g-tctcta-catg-t----c-t-t-gt------aacag---caaaat-ttg-a
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 1 C 0
s Rattus_norvegicus.chr16                                 53573670 18 +  90668790 ---------------------------------------------------------------------------------T-CT------ACCTA---CAGAGt-tgg-a
i Rattus_norvegicus.chr16                                I 50 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        369073 58 -   3329780 taaactcaggccaaga-------c------aca--t----a--aaaagt---------g-tctcaa-catt-t----t-t----t------aatgg---caaaat-tta-a
i Rhinolophus_sinicus.LVEH01000134.1                     I 1 C 0
s Rhinopithecus_bieti.k119_1041714                              48 63 +      5697 CAAATTTAGGCCaaga-------catat----t--t----a--aaagat---------g-tcttga-catt-t-----tt-ctct------aacagcaa---aat-tgg-a
i Rhinopithecus_bieti.k119_1041714                       C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91240522 63 - 195417433 CAAATTTAGGCCAAGA-------CATAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7676169 63 +   7961872 CAAATTTAGGCCaaga-------catat----t--t----a--aaagat---------g-tcttga-catt-t-----tt-ctct------aacagcaa---aat-tgg-a
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                90095 61 -     96226 CAAACTCAGGCCAAGA-------C-----C-TATGT----A--AAAAGT---------G-TCTCAA-CATT-T------T-T-GT------AACAG---CAGAAT-TTG-A
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            I 1 C 0
s Saiga_tatarica.SaiTat_scaffold_133311                       1250 64 +      9503 caaactcagaccaaaa-------c------ttt--tat--a--aaggag---------g-tctcta-tatt-t--ttt-t-t-gt------aacag---caaaat-ttt-a
i Saiga_tatarica.SaiTat_scaffold_133311                  I 1 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    155405 18 -    313613 ---------------------------------------------------------------------------------t-gt------gatag---caaaat-ttg-g
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 34 C 0
s Semnopithecus_entellus.k141_1672505                         4324 63 -     12572 CAAATTTAGGCCAAGA-------CATAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      31176 63 +     39453 CAAATTTAGGCCAAGA-------CATAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           11680 63 +     27826 CAAATTTAGGTCAAGA-------CATAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            11225 63 -     19483 CAAATTTAGGCCAAGA-------CATAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      4523 63 -     12762 CAAATTTAGGCCAAGA-------CATAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           4366 63 +     13763 CAAATTTAGGCCAAGA-------CATAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     3258 18 -     30804 ---------------------------------------------------------------------------------T-GT------AGCAT---CAAAAT-TGG-A
i Sigmodon_hispidus.SigHis_scaffold_42075                I 45 C 0
s Sorex_araneus.JH798187.1                                13653247 17 -  18376816 -----------------------------------------------------------------------------------AT------TATAG---CAAAAT-TTG-A
i Sorex_araneus.JH798187.1                               I 41 C 0
s Spermophilus_dauricus.KZ294078.1                         1956322 14 -   3870691 ------------------------------------------------------------------------------------t------cacag---caaaat-tt---
i Spermophilus_dauricus.KZ294078.1                       I 23 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             32247 13 +     97271 ----CTCAA-------GCCAAGGC---------------------------------------------------------------------------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         T 223 I 44
s Suricata_suricatta.SurSur_flattened_line_6629              20754 61 -    196729 CAAACTCAAGACAAGA-------C----T-ATA--T----A--GAAGAT---------G-TCTCAA-CATT-TT-----T-T-GT------AATAG---CAAAAT-TTA-G
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 C 0
s Sus_scrofa.CM000828.4                                    6813897 40 +  69701581 caaactcagaccaaga-------c--------a--tat--a--aaaagc---------a-tctcaa-tctc-t--------------------------------------
i Sus_scrofa.CM000828.4                                  I 1 I 18
s Tadarida_brasiliensis.TadBra_scaffold_25820                13455 27 +     41958 ---------------------------------------------------------------CAT-Tttt-t------t-c-at------aatag---caaaat-gtg-a
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 19 C 0
s Tarsius_lariang.k141_2201908                               28257 61 +     70052 CAAACTCAGGTCAAGA-------TTCAT----A--T----A--AAAGAT---------G-TCTCAA-CATT-T-----TT-TTCT------AACAGC-----ATT-TAG-A
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                3054 61 -     16117 CAAACTCAGGTCAAGA-------TTCAT----A--T----A--AAAGAT---------G-TCTCAA-CATT-T-----TT-TTCT------AACAGC-----ATT-TAG-A
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186432840 63 + 186847797 CAAATTTAGGCcaaga-------tatat----t--t----a--aaagat---------g-tCTTGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              107540 28 +    114563 ----------------------------------------------------------------AA-CGTTTC-----TT-T-GT------AAGAG---CAAAAG-TTG-G
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_85600                    4660 23 +     18632 --------------------------------------------------------------------ttt-t------c-t-at------agtag---ccaaat-tta-a
i Tolypeutes_matacus.TolMat_scaffold_85600               I 39 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     83239 18 +    610378 caaactcaggtcaaga-------c--------a------------------------------------------------------------------------------
i Tonatia_saurophila.TonSau_scaffold_294                 I 1 I 25
s Trachypithecus_auratus.k141_722599                         15262 63 -     20410 CAAATTTAGGCCAAGA-------CATAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AACGGCAA---AAT-TGG-A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      4387 63 -     12674 CAAATTTAGGCCAAGA-------CATAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       15370 63 +     19930 CAAATTTAGGCCAAGA-------CATAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AACGGCAA---AAT-TGG-A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      11770 63 -     19997 CAAATTTAGGCCAAGA-------CATAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            51913 63 -     60166 CAAATTTAGGCCAAGA-------CATAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        19376 63 -     27529 CAAATTTAGGCCAAGA-------CATAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AACGGCAA---AAT-TGG-A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                       1006 63 +      9229 CAAATTTAGGCCAAGA-------CATAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          12908 63 -     21137 CAAATTTAGGCCAAGA-------CATAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                    1008 63 +      9131 CAAATTTAGGCCAAGA-------CATAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                          974 63 -      3730 CAAATTTAGGCCAAGA-------CATAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        29242 63 +     32220 CAAATTTAGGCCAAGA-------CATAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5943339 63 +   6242583 CAAATTTAGGCCAAGA-------CATAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       12591 63 +     20839 CAAATTTAGGCCAAGA-------CATAT----T--T----A--AAAGAT---------G-TCTTGA-CATT-T-----TT-CTCT------AACAGCAA---AAT-TGG-A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    2640 66 +     27266 TAAACTCAGACCAAAA-------C----T--TA--A--ATA--AAAGAT---------A-TCACTA-CATT-TTTTTT-T-T-TT------GGTAG---CAAAAT-TTG-A
i Tragulus_javanicus.TraJav_scaffold_40725               I 1 C 0
s Tupaia_chinensis.KB320699.1                              2159680 59 +   4065304 C----TCAGGCAAAGA-------CTTAC----A--T----A--AAAGTT---------G-CCTAATGTTTT-T-----TT-T-CC------AAcaa---caaaac-tgg-a
i Tupaia_chinensis.KB320699.1                            I 3 C 0
s Tupaia_tana.TupTan_flattened_line_306982                    1705 58 -      4186 C----TTAGGCAAAGA-------GTTAT----A--T----A--AAAGTT---------G-TCTCAT-TTTT-T-----TT-T-CC------AACAA---CAAAAC-TGG-A
i Tupaia_tana.TupTan_flattened_line_306982               I 3 C 0
s Tursiops_truncatus.MRVK01000835.1                       15740503 62 +  33153633 taaactcagaccaaga-------c------tta--cct--a--aatggt---------g-tctcaa-catt-t----t-t-t-gt------aatag---caaaat-ttg-a
i Tursiops_truncatus.MRVK01000835.1                      I 1 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   55491 24 -     77625 --------------------------------------------------------------------atttt------t-t-gt------aatag---caaaat-ttg-a
i Uropsilus_gracilis.UroGra_scaffold_12083               I 34 C 0
s Ursus_maritimus.KK499267.1                               4851630 13 -   5085361 ----CTCAA-------GGGAAGGC---------------------------------------------------------------------------------------
i Ursus_maritimus.KK499267.1                             T 225 I 45
s Vicugna_pacos.KN270157.1                                 5374163 61 -   5488506 caaa-tcagaccaaga-------c--------t--tatatt--aaaagt---------g-tctcaa-aattct------t-t-gt------aagaa---caaaat-ttg-a
i Vicugna_pacos.KN270157.1                               I 1 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 13378  2 -     43706 ------------------------------------------------------------------------------------------------------------g-a
i Vulpes_lagopus.VulLag_flattened_line_30954             I 537 C 0
s Xerus_inauris.XerIna_scaffold_2302                          3377 32 +    224448 ------------------------------------------------t---------t-tttcaa-cat--t-----tt-c-cc------cacag---caaaat-tag-a
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      16920 32 +     63895 ------------------------------------------------A---------G-TTTCCA-CATT-T------T-T-CT------AATAT---GAAAAT-TAG-A
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 37 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_761354             803 62 -      1267 TAAACTCAGaccaaga-------c------tta--cgt--a--aatggt---------g-tctcaa-catt-t----t-t-t-gt------aatag---caaaat-ttg-a
i Ziphius_cavirostris.ZipCav_flattened_line_761354       I 4 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tapirus_terrestris.TapTer_scaffold_755                    389823 643 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      121344 643 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                        67149665 1414 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184766 1004 -  29670104 I
e Manis_pentadactyla.KN006162.1                              53022 987 -    317179 I
e Manis_javanica.JSZB01003497.1                              20877 990 +    737560 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     8427 743 -     14121 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Jaculus_jaculus.JH725527.1                               8278673 121 -   9596543 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               35993 651 +    498745 I
e Equus_caballus.CM000403.2                               18533964 651 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1286155 651 +   4378816 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    8624 649 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  675871 642 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5047 647 -     25243 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Allactaga_bullata.AllBul_scaffold_9566                     75924 121 -     89534 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      11188 5 +     62944 AAA-CA
s Acinonyx_jubatus.LLWD01001279.1                           829568 5 -   1699592 aaa-ca
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     73705 5 +     87051 AAA-TA
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 9
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511885 5 -  29979442 aaa-ca
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 44 I 10
s Ailurus_fulgens.LNAC01001112.1                             80965 5 -    347723 aaa-ca
i Ailurus_fulgens.LNAC01001112.1                         I 50 I 10
s Allenopithecus_nigroviridis.k141_3361533                   19023 5 -     52922 aag-ca
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         18959 5 -     28001 aag-ca
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          9454 5 -     18505 aag-ca
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                          10307 5 -     12518 aag-ca
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             10663 4 +     51355 GAA-C-
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                3769 4 -     36483 GAA-C-
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              14223 4 +     28687 GAA-C-
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 2695 4 +     27940 GAA-C-
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            3783 4 -      9457 GAA-C-
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             2741 4 +     30492 GAA-C-
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              6958 4 +     47717 GAA-C-
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              3463 4 +      5663 GAA-C-
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             17914 4 +     50774 GAA-C-
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          679711 5 -   2318259 aaa-ca
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      187435 5 +    412891 caa-ca
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303               991 5 -     32520 aaa-ca
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      14921 5 +     20879 ATA-TA
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6845 5 +     43469 aaa-ca
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21211153 4 -  21539123 AAA-C-
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               45952 4 -     48001 AAA-C-
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 28753 4 -     30947 AAA-C-
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               10528 4 -     89868 AAA-C-
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              14910 4 -     40414 AAA-C-
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                22798 4 +     72325 AAA-C-
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15194188 5 +  23207421 aaa-ca
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         4653 5 -     18090 aaa-ca
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    30803 5 +     34529 AAA-CA
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    203426 5 -    288883 aaa-ca
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20276664 5 +  48749331 aaa-ca
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1129218 5 -   1948126 aaa-ca
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18087302 5 +  45695690 aaa-ca
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2823255 5 +   4408762 aaa-ca
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                103774 5 -    122966 AAA-TA
i Cacajao_ayresi.k141_552049                             C 0 I 1
s Cacajao_calvus.k141_5142                                   63277 5 +     81800 AAA-CA
i Cacajao_calvus.k141_5142                               C 0 I 1
s Cacajao_hosomi.k141_81245                                  32459 5 -     95584 AAA-CA
i Cacajao_hosomi.k141_81245                              C 0 I 1
s Cacajao_melanocephalus.k141_619699                         56560 5 -    119600 AAA-CA
i Cacajao_melanocephalus.k141_619699                     C 0 I 1
s Camelus_bactrianus.KN276810.1                           10004708 5 -  17673402 aaa-ca
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2337180 5 -   7040546 aaa-ca
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  405478 5 -   1652518 aaa-ca
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17801762 5 -  60362399 aaa-ca
i CanFam4.chr16                                          C 0 I 10
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     2503 5 -     43241 aaa-ca
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 I 10
s Canis_lupus_dingo.QKWQ01000480.1                         9037205 5 -   9314153 aaa-ca
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 10
s Canis_lupus_familiaris.chr16                            17961674 5 -  59632846 aaa-ca
i Canis_lupus_familiaris.chr16                           C 0 I 10
s Canis_lupus_orion.HG994398.1                            18502976 5 +  63665305 aaa-ca
i Canis_lupus_orion.HG994398.1                           C 0 I 10
s Capra_aegagrus.CM003241.1                               18833721 5 +  46296322 aaa-ca
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18064538 5 -  44709034 aaa-ca
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    3281 5 -     12242 AAA-TA
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                7186 5 -     11696 aaa-ca
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    139772 5 +    179628 aaa-ca
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     96370 5 +    217609 aaa-ca
i Catagonus_wagneri.CatWag_scaffold_2839                 I 18 C 0
s Cavia_aperea.AVPZ01000300.1                             18351834 5 -  23392119 NNN-NN
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18364094 5 -  23407841 aaa-ta
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                       102976 5 +    143979 AAA-TA
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4479975 5 +   4669795 AAG-CA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        4474 5 +     17872 aag-ca
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           5064 5 -     14043 aag-ca
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          13162 5 +     27781 AAG-CA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        13323 5 -     20310 aag-ca
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          16295 5 +     29689 AAG-CA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           11055 5 -     20078 AAG-CA
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          18966 5 -     27936 AAG-CA
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            7841 5 -     17152 AAG-CA
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38827567 5 +  39242232 AAG-CA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21227073 5 -  21565898 AAG-CA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       44192 5 -     53127 aag-ca
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        4444 5 +     13442 AAG-CA
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       18988 5 -     27947 AAG-CA
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         2015 5 +     10558 AAG-CA
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          5020 5 +     14005 aag-ca
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            6610 5 -      8501 aga-ca
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheracebus_lucifer.k141_49986                               2379 5 -     17098 AAA-CA
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              2255 5 +     17877 AAA-CA
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            159822 5 -    216457 AAA-CA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          64291 5 +     76511 AAA-CA
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254930 5 +   2543920 aaa-ta
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_israelita.k141_747660                          100903 5 +    146308 AAA-CA
i Chiropotes_israelita.k141_747660                       C 0 I 1
s Chiropotes_sagulatus.k141_1421488                          32710 5 -     50570 AAA-CA
i Chiropotes_sagulatus.k141_1421488                      C 0 I 1
s Chlorocebus_aethiops.ctg25                              18432890 5 -  18827391 aag-ca
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       19387 5 -     50209 aag-ca
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135426393 5 + 135778131 AAG-CA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1914930 5 +   2368649 AAG-CA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199953172 5 + 200372422 AAG-CA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              41481 5 +     84244 AAG-CA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17551101 5 -  53390261 aaa-cc
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           3087 3 +     23735 aaa---
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      I 454 I 9
s Cricetomys_gambianus.CriGam_scaffold_18520                 52960 5 +     63868 aag-ta
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11668737 4 + 224834208 AAA--A
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_1282032              354 5 -       767 taa-cc
i Crocidura_indochinensis.CroInd_scaffold_1282032        n 1 n 1
s Cryptoprocta_ferox.CryFer_flattened_line_16129             30746 5 -     87169 aaa-ca
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 20 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  38210 5 +     51376 AAA-TA
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900             2039 5 -     75252 AAA-TA
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            69633 5 +   2246927 aaa-ca
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16814071 5 +  35494412 aaa-ca
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8632190 5 +  20541912 aaa-ca
i Desmodus_rotundus.KZ672289.1                           I 25 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    38410 5 +     67921 AAA-TA
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 35554 5 -     42551 AAA-TA
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.AWHC01278734.1                                875 5 +      2334 aaa-ca
i Eidolon_helvum.AWHC01278734.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       314193 5 +    607251 aaa-ca
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          23488 5 -    110024 aaa-ta
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                            3398 5 +      8657 AAA-TA
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16330914 5 -  41312741 aaa-ca
i Enhydra_lutris.KZ291758.1                              I 42 I 10
s Eptesicus_fuscus.JH977646.1                              2149327 5 -  14770903 aaa-ca
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Erythrocebus_patas.Contig38                             21209564 5 -  21539334 AAG-CA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           13499 5 +    133382 aaa-ca
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             27446 5 -     44125 aaa-ca
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20239312 5 + 206538554 aaa-ca
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20198187 5 + 205367284 aaa-ca
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 11847 5 -     36744 aaa-ca
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             852539 5 +   3816255 aaa-ta
i Fukomys_damarensis.KN121974.1                          C 0 I 65
s Galeopterus_variegatus.GalVar_scaffold_108840               4904 6 -      9135 aaaaca
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     611428 5 -    660261 aaa-ca
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            33603 5 +     49224 aaa-ca
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              20414 5 -     32273 AAA-CA
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186342550 5 + 186649187 AAA-CA
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   35635 5 +     78134 aaa-ca
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               244555 5 +    327341 AAA-GA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 22026 5 +     36099 aaa-ca
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20664186 5 +  22651954 aaa-ta
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112930 5 +    128679 aaa-ca
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       112669 5 +   1711038 aaa-ca
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188               1241 5 +      9903 aaa-ca
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 C 0
s Hoolock_leuconedys.ctg274                                    439235 5 +    630532 AAA-CA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  47298 2 +     55795 A----A
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23810 5 -    143317 AAA-TA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      85112 5 +    135385 AAA-TA
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7523182 5 -   7955117 aaa-aa
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                1277 5 -     31341 aaa-ca
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                 1023 5 -     18011 aaa-ca
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         16955 4 -     38430 AAA-C-
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    19032 5 -     42476 aaa-ca
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3044367 5 +   3914936 aaa-ca
i Leptonychotes_weddellii.KB714746.1                     I 45 I 10
s Lipotes_vexillifer.KE559953.1                             270332 5 -    662738 aaa-ca
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1441522 5 +   1826925 aag-ca
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17957914 5 -  59628241 aaa-ca
i Lycaon_pictus.CM007581.1                               C 0 I 10
s Macaca_arctoides.k141_2326796                              11332 5 +     40492 aag-ca
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59680586 5 +  60120075 AAG-CA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 17103 5 -     26193 aag-ca
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            84881 5 -    114318 aag-ca
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 10570 5 -     23192 aag-ca
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                20036 5 -     29190 aag-ca
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  28614 5 +     37952 aag-ca
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186843689 5 + 187317192 AAG-CA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25462269 5 -  25927173 AAG-CA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  84472 5 +     89720 aag-ca
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                11461 5 +     20474 AAG-CA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  11260 5 -     14993 aag-ca
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  334122 5 -    668171 aag-ca
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 9570 5 -     24072 aag-ca
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               30203 5 -     45290 aag-ca
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 92997 5 +     94391 aaa-ca
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23941789 5 -  24302211 aag-ca
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355904 5 +    752769 aag-ca
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33105529 2 -  40650429 ----aa
i Marmota_marmota.CZRN01000018.1                         I 1 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        15524 5 -    207569 aaa-ca
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             11626 5 +     13704 aaa-ca
i Mellivora_capensis.MelCap_flattened_line_69365         I 42 I 10
s Meriones_unguiculatus.MerUng_scaffold_7390                 35740 5 +    140813 AAA-TA
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 5
s Mesoplodon_bidens.MesBid_scaffold_108144                    5710 5 +     10310 aaa-ca
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                17937 5 -     19307 aaa-ca
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1852532 5 +   8254450 aaa-ca
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             36216 5 +     64694 AAA-CA
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                          13470 5 -     28506 AAG-CA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         7235 5 -      8324 aaa-ca
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 45 I 10
s Monodon_monoceros.MonMon_M_scaffold_103                    29456 5 -    437263 aaa-ca
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 143526 5 -    366855 aaa-cg
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   3474 5 +     82753 aaa-ca
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   36482 5 +     37127 AGA-GA
i Mungos_mungo.MunMun_flattened_line_23663               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                           9283 5 +     14753 aaa-ca
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84364097 5 - 120012414 aaa-ta
i Mus_caroli.LT608237.1                                  C 0 I 5
s Mus_musculus.chr8                                       87653602 5 - 129401213 aaa-ta
i Mus_musculus.chr8                                      C 0 I 5
s Mus_pahari.LT608297.1                                   31358321 5 -  89631738 aaa-ta
i Mus_pahari.LT608297.1                                  C 0 I 5
s Mus_spretus.CM004101.1                                  90756092 5 - 130317789 aaa-ta
i Mus_spretus.CM004101.1                                 C 0 I 5
s Muscardinus_avellanarius.MusAve_scaffold_82313              7324 5 +     14296 AAA-ca
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               303021 5 -  14710649 aaa-ca
i Mustela_putorius.JH418006.1                            I 42 I 4
s Myocastor_coypus.MyoCoy_scaffold_10123                     73467 2 -     80779 AA----
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                283031 5 -  10118263 aaa-ca
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1590349 5 -   6019432 aaa-ca
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3906461 5 -   4330536 aaa-ca
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_44643                          763 5 +     25416 aaa-ca
i Myotis_myotis.MyoMyo_scaffold_44643                    C 0 C 0
s Nannospalax_galili.KL204047.1                            2039179 5 -   3037898 aaa-ta
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               19525 5 +     21681 aag-ca
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308828 5 +  31847680 aaa-ca
i Neomonachus_schauinslandi.NINY01007730.1               I 45 I 10
s Neophocaena_asiaeorientalis.KZ687982.1                   5868419 5 +   7148211 aaa-ca
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    759717 5 +    783361 AAG-CA
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9151846 5 -   9404916 aaa-ca
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 10
s Ochotona_princeps.JH802162.1                             1367217 5 +   3988456 aaa-ga
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                  750490 4 +  11899542 -ta-ta
i Octodon_degus.JH651603.1                               I 533 C 0
s Odobenus_rosmarus.KB229312.1                              507970 5 -   2017862 aaa-ca
i Odobenus_rosmarus.KB229312.1                           I 45 I 10
s Odocoileus_virginianus.KZ100018.1                         146995 5 +    630418 aga-ca
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          81108 5 -    150152 aaa-ca
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                      580 5 +    140218 AAA-TA
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 1555
s Onychomys_torridus.OnyTor_scaffold_2986                    83508 5 +    102263 AAA-TA
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2784312 5 -  10937097 aaa-ca
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       465270 5 -    559221 aaa-ca
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 10
s Ovis_aries.CM001607.2                                   17589777 5 +  44047080 aaa-ca
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      177979 5 -    191736 AAA-CA
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    48536 5 +     80009 AAA-CA
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189147402 5 + 189151597 aaa-ca
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  153383 5 +    230217 aaa-ca
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                266694 5 +  18783137 aaa-ca
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4723519 5 -   8748460 aaa-ca
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1268713 5 -   2937107 aaa-ca
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183447595 5 + 183742232 AAG-CA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            11245 5 +     20448 AAG-CA
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20568053 5 +  20919399 aag-ca
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                   9999 5 +     41871 AAG-CA
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    13278 5 +     27711 aag-ca
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  4277 5 -     11374 aag-ca
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14808 5 -     78924 aaa-ca
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 4 C 0
s Peromyscus_maniculatus.KI615324.1                       18214244 5 -  18517816 AAA-TA
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_221660                      899 5 -      2102 AAG-TA
i Petromus_typicus.PetTyp_scaffold_221660                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              11381 5 +     63832 aaa-ca
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            2637 5 +     68526 AAG-CA
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        42774 5 +     89929 aag-ca
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            44190 5 +     51399 aag-ca
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14300426 5 -  14605196 AAG-CA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             4100 5 +     22620 AAA-CA
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pithecia_albicans.k141_1476471                              6174 5 +     26961 AAA-CA
i Pithecia_albicans.k141_1476471                         C 0 I 1
s Pithecia_chrysocephala.k141_839575                          2302 5 +     23417 AAA-CA
i Pithecia_chrysocephala.k141_839575                     C 0 I 1
s Pithecia_hirsuta.k141_305604                                6166 5 +     29694 AAA-CA
i Pithecia_hirsuta.k141_305604                           C 0 I 1
s Pithecia_mittermeieri.k141_446740                          31192 5 +     52772 AAA-CA
i Pithecia_mittermeieri.k141_446740                      C 0 I 1
s Pithecia_pissinattii.k141_1824269                           6188 5 +     26198 AAA-CA
i Pithecia_pissinattii.k141_1824269                      C 0 I 1
s Pithecia_pithecia.tarseq_165                             3942719 5 +   4542175 AAA-CA
i Pithecia_pithecia.tarseq_165                           C 0 I 1
s Pithecia_vanzolinii.k141_1697688                            6152 5 -     23490 AAA-CA
i Pithecia_vanzolinii.k141_1697688                       C 0 I 1
s Platanista_gangetica.PlaMin_flattened_line_173610            687 5 +      7680 aaa-ca
i Platanista_gangetica.PlaMin_flattened_line_173610      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       10411 5 -     39866 AAA-CA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        19575 5 +     34906 AAA-CA
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       23837 5 +     87950 AAA-CA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     24666 5 +     88961 AAA-CA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         10334 5 +     39403 AAA-CA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          24117 5 -     87928 AAA-CA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         31078 5 +     60166 AAA-CA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      31274 5 +     67232 AAA-CA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          26747 5 +     90634 AAA-CA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          24120 5 -     89403 AAA-CA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189135554 5 + 189387572 AAA-CA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9575164 5 +   9816681 AAA-CA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               77706 5 -     81375 AAG-CA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              9537 5 +     19060 AAG-CA
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            13374 5 -     21651 aaa-ta
i Psammomys_obesus.NESX01036370.1                        C 0 I 6
s Pteronotus_parnellii.KE909381.1                            17009 5 -     21811 aag-ca
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41828 5 +     42204 AAA-CA
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 42 I 10
s Pteropus_alecto.KB030862.1                              22979083 5 +  28871421 aaa-ca
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1362068 5 +   4952924 aaa-ca
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20276582 5 -  38429054 aaa-ca
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             19517 5 -     91421 aag-ca
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7613644 5 +   7812017 AAG-CA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             19549 5 -     72585 aag-ca
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  8830 5 +     55207 aga-ca
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53573688 5 +  90668790 aaa-ta
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        369131 5 -   3329780 aaa-ca
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_1041714                             111 5 +      5697 aag-ca
i Rhinopithecus_bieti.k119_1041714                       C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91240585 5 - 195417433 AAG-CA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7676232 5 +   7961872 aag-ca
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                90156 5 -     96226 AAA-CA
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_133311                       1314 5 +      9503 aaa-ca
i Saiga_tatarica.SaiTat_scaffold_133311                  C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    155423 5 -    313613 gaa-ca
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                         4387 5 -     12572 AAG-CA
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      31239 5 +     39453 AAG-CA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           11743 5 +     27826 AAG-CA
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            11288 5 -     19483 AAG-CA
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      4586 5 -     12762 AAG-CA
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           4429 5 +     13763 AAG-CA
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     3276 5 -     30804 AAA-TA
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Sorex_araneus.JH798187.1                                13653264 5 -  18376816 TAG-CA
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1956336 4 -   3870691 -aa-at
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             32304 5 +     97271 aaa-ca
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 44 I 10
s Suricata_suricatta.SurSur_flattened_line_6629              20815 5 -    196729 AAA-GA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6813955 5 +  69701581 aaa-ca
i Sus_scrofa.CM000828.4                                  I 18 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                13482 5 +     41958 aaa-ca
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Theropithecus_gelada.CM009954.1                        186432903 5 + 186847797 AAG-CA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              107568 5 +    114563 AAA-TA
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_85600                    4683 5 +     18632 aaa-ca
i Tolypeutes_matacus.TolMat_scaffold_85600               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     83282 5 +    610378 aaa-ca
i Tonatia_saurophila.TonSau_scaffold_294                 I 25 C 0
s Trachypithecus_auratus.k141_722599                         15325 5 -     20410 AAG-CA
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      4450 5 -     12674 AAG-CA
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       15433 5 +     19930 AAG-CA
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      11833 5 -     19997 AAG-CA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            51976 5 -     60166 AAG-CA
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        19439 5 -     27529 AAG-CA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                       1069 5 +      9229 AAG-CA
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          12971 5 -     21137 AAG-CA
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                    1071 5 +      9131 AAG-CA
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                         1037 5 -      3730 AAG-CA
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        29305 5 +     32220 AAG-CA
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5943402 5 +   6242583 AAG-CA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       12654 5 +     20839 AAG-CA
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    2706 6 +     27266 AAAAAA
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tupaia_chinensis.KB320699.1                              2159739 5 +   4065304 aaa-ca
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_306982                    1763 5 -      4186 AAA-CA
i Tupaia_tana.TupTan_flattened_line_306982               C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15740565 5 +  33153633 aaa-ca
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   55515 5 -     77625 aaa-ca
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4851688 5 -   5085361 aaa-ca
i Ursus_maritimus.KK499267.1                             I 45 I 10
s Vicugna_pacos.KN270157.1                                 5374224 5 -   5488506 aaa-ca
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 13380 5 -     43706 aaa-ca
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 10
s Xerus_inauris.XerIna_scaffold_2302                          3409 5 +    224448 aaa-aa
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      16952 5 +     63895 GAA-AA
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 6
s Ziphius_cavirostris.ZipCav_flattened_line_761354             865 5 -      1267 aaa-ca
i Ziphius_cavirostris.ZipCav_flattened_line_761354       C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202 0 +      8798 C
e Galago_senegalensis.k141_631886                             7400 0 +     11339 C
e Galago_moholi.ctg2040                                     429710 0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964 2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445 0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734 0 -     33856 C
e Perodicticus_potto.k141_1186926                              597 0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219 0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tarsius_wallacei.k141_254427                                3115 0 -     16117 C
e Tarsius_lariang.k141_2201908                               28318 0 +     70052 C
e Tapirus_terrestris.TapTer_scaffold_755                    389823 643 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      121344 643 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                        67149665 1414 + 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869 0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414 0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947 0 - 196305487 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184766 1004 -  29670104 I
e Manis_pentadactyla.KN006162.1                              53022 987 -    317179 I
e Manis_javanica.JSZB01003497.1                              20877 990 +    737560 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     8427 743 -     14121 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Jaculus_jaculus.JH725527.1                               8278673 121 -   9596543 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689 0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               35993 651 +    498745 I
e Equus_caballus.CM000403.2                               18533964 651 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1286155 651 +   4378816 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    8624 649 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  675871 642 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5047 647 -     25243 I
e Cephalopachus_bancanus.k141_1423433                         7319 0 +     31688 C
e Carlito_syrichta.NW_007259797.1                           157824 0 -    496798 C
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538 0 +      5281 C
e Allactaga_bullata.AllBul_scaffold_9566                     75924 121 -     89534 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      11193 17 +     62944 A-----A--CTAAACCT-----------------T-GA---TA-AA
s Acinonyx_jubatus.LLWD01001279.1                           829573 16 -   1699592 a-----c--------ct---c-aa-c-a--c---t-ga---a--aa
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 1
s Acomys_cahirinus.AcoCah_scaffold_12655                     73719  5 +     87051 ----------------------------------T-AA---AA---
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 9 I 3
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511900  6 -  29979442 ----------------------------------t-ga---a--aa
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 10 I 23
s Ailurus_fulgens.LNAC01001112.1                             80980  6 -    347723 ----------------------------------t-ga---a--aa
i Ailurus_fulgens.LNAC01001112.1                         I 10 I 23
s Allenopithecus_nigroviridis.k141_3361533                   19028 17 -     52922 a-----a--ctaaacct-----------------t-ga---aa-aa
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         18964 17 -     28001 a-----a--ctaaacct-----------------t-ga---aa-aa
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          9459 17 -     18505 a-----a--ctaaacct-----------------t-ga---aa-aa
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                          10312 17 -     12518 a-----a--ctaaacct-----------------t-ga---aa-aa
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             10667 18 +     51355 A-----A-ATTAAACCT-----------------T-GA---AA-AA
i Alouatta_belzebul.k141_3560514                         C 0 I 3
s Alouatta_caraya.k141_1701091                                3773 18 -     36483 A-----A-ATTAAACCT-----------------T-GA---AA-AA
i Alouatta_caraya.k141_1701091                           C 0 I 3
s Alouatta_discolor.k141_566626                              14227 18 +     28687 A-----A-ATTAAACCT-----------------T-GA---AA-AA
i Alouatta_discolor.k141_566626                          C 0 I 3
s Alouatta_juara.k141_1302312                                 2699 18 +     27940 A-----A-ATTAAACCT-----------------T-GA---AA-AA
i Alouatta_juara.k141_1302312                            C 0 I 3
s Alouatta_macconnelli.k141_918386                            3787 18 -      9457 A-----A-ATTAAACCT-----------------T-GA---AA-AA
i Alouatta_macconnelli.k141_918386                       C 0 I 3
s Alouatta_nigerrima.k141_1929159                             2745 18 +     30492 A-----A-ATTAAACCT-----------------T-GA---AA-AA
i Alouatta_nigerrima.k141_1929159                        C 0 I 3
s Alouatta_palliata.k141_2135620                              6962 18 +     47717 A-----A-ATTAAACCT-----------------T-GA---AA-AA
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              3467 18 +      5663 A-----A-ATTAAACCT-----------------T-GA---AA-AA
i Alouatta_puruensis.k141_362188                         C 0 I 3
s Alouatta_seniculus.k141_117119                             17918 18 +     50774 A-----A-ATTAAACCT-----------------T-GA---AA-AA
i Alouatta_seniculus.k141_117119                         C 0 I 3
s Ammotragus_lervia.NIVO01071767.1                          679716 16 -   2318259 a-----a--------ct-aa--a-t-g-t-----t-ga---a--aa
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      187440 28 +    412891 a-----c--------gtgaaccaatcgatgctcaagag---g--aa
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303               996 16 -     32520 a-----c--------ct-aa--a-t-g-t-----T-GA---A--AA
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      14926 14 +     20879 A-----A--------TC-----------CAACTTT-GA---A----
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 3
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6850 28 +     43469 a-----c--------atgaaccaatcgatgctcaagaa---a--aa
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21211157 18 -  21539123 A-----A-ATTAAACCT-----------------T-GA---AA-AA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               45956 18 -     48001 A-----A-ATTAAACCT-----------------T-GA---AA-AA
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 28757 18 -     30947 A-----A-ATTAAACCT-----------------T-GA---AA-AA
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               10532 18 -     89868 A-----A-ATTAAACCT-----------------T-GA---AA-AA
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              14914 18 -     40414 A-----A-ATTAAACCT-----------------T-GA---AA-AA
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                22802 18 +     72325 A-----A-ATTAAACCT-----------------T-GA---AA-AA
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15194193 16 +  23207421 a-----c--------ct-aa--a-t-g-t-----c-ta---a--aa
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         4658 16 -     18090 a-----c--------ct-aa--a-t-g-t-----c-ta---a--aa
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    30808 16 +     34529 A-----A--------CT-----------AAATGTT-GA---A--AA
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    203431 16 -    288883 a-----c--------ct-aa--aa--g-t-----t-ta---a--aa
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20276669 16 +  48749331 a-----c--------ct-aa--aa--g-t-----t-ta---a--aa
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1129223 16 -   1948126 a-----c--------ct-aa--aa--g-t-----t-ta---a--aa
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18087307 16 +  45695690 a-----c--------ct-aa--aa--g-t-----t-ta---a--aa
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2823260 16 +   4408762 a-----c--------ct-aa--aa--g-t-----t-ta---a--aa
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                103780 15 -    122966 ---------CTAAACCT-----------------T-GA---AA-AA
i Cacajao_ayresi.k141_552049                             I 1 C 0
s Cacajao_calvus.k141_5142                                   63283 15 +     81800 ---------CTAAACCT-----------------T-GA---AA-AA
i Cacajao_calvus.k141_5142                               I 1 C 0
s Cacajao_hosomi.k141_81245                                  32465 15 -     95584 ---------CTAAACCT-----------------T-GA---AA-AA
i Cacajao_hosomi.k141_81245                              I 1 C 0
s Cacajao_melanocephalus.k141_619699                         56566 15 -    119600 ---------CTAAACCT-----------------T-GA---AA-AA
i Cacajao_melanocephalus.k141_619699                     I 1 C 0
s Camelus_bactrianus.KN276810.1                           10004713 16 -  17673402 a-----t--------gt-aa--a-t-g-t-----t-ga---a--aa
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2337185 16 -   7040546 a-----t--------gt-aa--a-t-g-t-----t-ga---a--aa
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  405483 16 -   1652518 a-----t--------gt-aa--a-t-g-t-----t-ga---a--aa
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17801777  6 -  60362399 ----------------------------------t-ga---a--aa
i CanFam4.chr16                                          I 10 I 23
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     2518  6 -     43241 ----------------------------------t-ga---a--aa
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 10 I 23
s Canis_lupus_dingo.QKWQ01000480.1                         9037220  6 -   9314153 ----------------------------------t-ga---a--aa
i Canis_lupus_dingo.QKWQ01000480.1                       I 10 I 23
s Canis_lupus_familiaris.chr16                            17961689  6 -  59632846 ----------------------------------t-ga---a--aa
i Canis_lupus_familiaris.chr16                           I 10 I 23
s Canis_lupus_orion.HG994398.1                            18502991  6 +  63665305 ----------------------------------t-ga---a--aa
i Canis_lupus_orion.HG994398.1                           I 10 I 23
s Capra_aegagrus.CM003241.1                               18833726 16 +  46296322 a-----a--------ct-aa--a-t-g-t-----t-ga---a--aa
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18064543 16 -  44709034 a-----a--------ct-aa--a-t-g-t-----t-ga---a--aa
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    3286  4 -     12242 A-----A--------GC-----------------------------
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 13
s Carollia_perspicillata.CarPer_scaffold_92756                7191 28 -     11696 a-----c--------atgaaccgatcgatgctcaagaa---a--aa
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    139777 15 +    179628 a-----a--------cc-aa--a--c--t--t--t-ga---aa---
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 2
s Catagonus_wagneri.CatWag_scaffold_2839                     96375 16 +    217609 a-----c--------ct-aa--a-t-g-t-----t-ga---g--aa
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18351839  4 -  23392119 N-----N--------NN-----------------------------
i Cavia_aperea.AVPZ01000300.1                            C 0 I 13
s Cavia_porcellus.DS562891.1                              18364099  4 -  23407841 a-----a--------cc-----------------------------
i Cavia_porcellus.DS562891.1                             C 0 I 13
s Cavia_tschudii.CavTsc_scaffold_8919                       102981  4 +    143979 A-----A--------CC-----------------------------
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 I 13
s Cercocebus_atys.KQ010504.1                               4479980 17 +   4669795 A-----A--CTAAACct-----------------t-ga---aa-aa
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        4479 17 +     17872 a-----a--ctaaacct-----------------t-ga---aa-aa
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           5069 17 -     14043 a-----a--ctaaacct-----------------t-ga---aa-aa
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          13167 17 +     27781 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        13328 17 -     20310 a-----a--ctaaacct-----------------t-ga---aa-aa
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          16300 17 +     29689 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           11060 17 -     20078 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          18971 17 -     27936 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            7846 17 -     17152 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38827572 17 +  39242232 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21227078 17 -  21565898 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       44197 17 -     53127 a-----a--ctaaacct-----------------t-ga---aa-aa
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        4449 17 +     13442 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       18993 17 -     27947 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         2020 17 +     10558 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          5025 17 +     14005 a-----a--ctaaacct-----------------t-ga---aa-aa
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            6615 16 -      8501 g-----g--------ct-aa--a-t-g-t-----t-ga---c--aa
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Cheracebus_lucifer.k141_49986                               2384 17 -     17098 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              2260 17 +     17877 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            159827 17 -    216457 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          64296 17 +     76511 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1254935  4 +   2543920 a-----a--------cc-----------------------------
i Chinchilla_lanigera.JH722012.1                         C 0 I 102
s Chiropotes_israelita.k141_747660                          100909 15 +    146308 ---------CTAAACCT-----------------T-GA---AA-AA
i Chiropotes_israelita.k141_747660                       I 1 C 0
s Chiropotes_sagulatus.k141_1421488                          32716 15 -     50570 ---------CTAAACCT-----------------T-GA---AA-AA
i Chiropotes_sagulatus.k141_1421488                      I 1 C 0
s Chlorocebus_aethiops.ctg25                              18432895 17 -  18827391 a-----a--ctaaacct-----------------t-ga---aa-aa
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       19392 17 -     50209 a-----a--ctaaacct-----------------t-ga---aa-aa
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135426398 17 + 135778131 A-----A--CTAAAcct-----------------t-ga---aa-aa
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1914935 17 +   2368649 A-----A--CTAAACct-----------------t-ga---aa-aa
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199953177 17 + 200372422 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              41486 17 +     84244 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17551106 16 -  53390261 a-----t--------ct-aa--a--c-a--c---t-ga---a--aa
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           3099  7 +     23735 ----------------------------------t-aa---a-aaa
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      I 9 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 52965 15 +     63868 a-----a--------ct-aa------g---ct-tt-aa---aa---
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 2
s Cricetulus_griseus.LT883664.1                           11668741 14 + 224834208 A-----A--------CT-----------AAAGTTT-AA---A----
i Cricetulus_griseus.LT883664.1                          C 0 I 2
s Crocidura_indochinensis.CroInd_scaffold_37019               5018 19 -     19598 ----------------T-----AACCTACACTTAA-AA---A--AA
i Crocidura_indochinensis.CroInd_scaffold_37019          I 616 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             30751 16 -     87169 a-----t--------ct---c-aat--a-----at-ga---a--aa
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 1
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  38215  4 +     51376 A-----A--------GC-----------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 13
s Dasyprocta_punctata.DasPun_flattened_line_15900             2044  4 -     75252 A-----A--------CC-----------------------------
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 13
s Dasypus_novemcinctus.JH564415.1                            69638 17 +   2246927 g-----c--------ct-aa--aat-g-t-----t-ga---c--aa
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16814076 16 +  35494412 a-----c--------ct-aa--a-tc--t-----c-ta---a--aa
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8632195 28 +  20541912 a-----c--------tccaacccatcgatgttcaagaa---c--aa
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    38415  4 +     67921 A-----A--------CC-----------------------------
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 102
s Dolichotis_patagonum.DolPat_scaffold_30833                 35559  4 -     42551 A-----A--------CC-----------------------------
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 I 13
s Eidolon_helvum.AWHC01278734.1                                880 17 +      2334 a-----c--------tt-aa--a-t-g-t-----t-ga---a-aaa
i Eidolon_helvum.AWHC01278734.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       314198 16 +    607251 a-----c--------ct-aa--a-t-g-t-----t-ca---a--aa
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          23493 15 -    110024 a-----a--------ct-aa--a--c----c--TT-AA---AA---
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 2
s Ellobius_talpinus.LOJH01081419.1                            3403 15 +      8657 A-----A--------CT-----------AAACCTT-AA---AA---
i Ellobius_talpinus.LOJH01081419.1                       C 0 I 2
s Enhydra_lutris.KZ291758.1                               16330929  6 -  41312741 ----------------------------------t-ga---a--aa
i Enhydra_lutris.KZ291758.1                              I 10 I 23
s Eptesicus_fuscus.JH977646.1                              2149332 24 -  14770903 a-----c--------ttgaaccaat-g-t--tcaagag---a--aa
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Erythrocebus_patas.Contig38                             21209569 17 -  21539334 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           13504 16 +    133382 a-----c--------ct-aa--a-t-g-t-----c-ta---a--ag
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             27451 16 -     44125 a-----c--------ct-aa--a-t-g-t-----c-ta---a--aa
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20239317 16 + 206538554 a-----c--------ct---c-aat--a--c---t-ga---a--aa
i Felis_catus.CM001381.2                                 C 0 I 1
s Felis_catus_fca126.CM031415.1                           20198192 16 + 205367284 a-----c--------ct---c-aat--a--c---t-ga---a--aa
i Felis_catus_fca126.CM031415.1                          C 0 I 1
s Felis_nigripes.FelNig_flattened_line_20823                 11852 16 -     36744 a-----c--------ct---c-aat--a--c---t-ga---a--aa
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 1
s Fukomys_damarensis.KN121974.1                             852609  4 +   3816255 a-----a--------tt-----------------------------
i Fukomys_damarensis.KN121974.1                          I 65 I 42
s Galeopterus_variegatus.GalVar_scaffold_108840               4910 17 -      9135 a-----a--------at-aa--a--c--t--t--t-ga---aa-aa
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     611433 16 -    660261 a-----c--------ct-aa--a-t-g-t-----t-ga---a--aa
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            33608 17 +     49224 a-----a--------cc-aa--a--c--t--t--t-ga---aa-aa
i Glis_glis.GliGli_scaffold_19807                        C 0 I 850
s Gorilla_beringei.k141_3596273                              20419 17 -     32273 A-----A--CTAAACCT-----------------T-GA---TA-AA
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186342555 17 + 186649187 A-----A--CTAAACCT-----------------T-ga---ta-aa
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   35640 17 +     78134 a-----a--------cc-aa--a--c--t--t--t-aa---aa-aa
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 662
s Helogale_parvula.HelPar_flattened_line_2585               244560 16 +    327341 A-----C--------CC-----------CAACAAT-GA---A--AA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 1
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 22031 16 +     36099 a-----a--------ct-aa--a-t-g-t-----t-ga---a--aa
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20664191  4 +  22651954 a-----a--------cc-----------------------------
i Heterocephalus_glaber.JH602082.1                       C 0 I 469
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112935 16 +    128679 a-----c--------tt-aa--a-t-g-t-----t-ga---a--aa
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       112674 17 +   1711038 a-----t--------ga-aa--a--c-at-----t-ga---a-aaa
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188               1246 17 +      9903 a-----c--------ttgaac-a-t---------t-ga---a-aaa
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 C 0
s Hoolock_leuconedys.ctg274                                    439240 17 +    630532 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  47300 15 +     55795 A-----C--------CT------------CACAAT-GA---A--AA
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 1
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23815  4 -    143317 A-----A--------CC-----------------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 13
s Hystrix_cristata.HysCri_scaffold_5660                      85117  4 +    135385 A-----A--------CC-----------------------------
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 13
s Ictidomys_tridecemlineatus.JH393364.1                    7523187 16 -   7955117 a-----ata------cc-aa--a--c----ct--t-ta---a----
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 3
s Inia_geoffrensis.IniGeo_flattened_line_34779                1282 16 -     31341 a-----c--------ct-aa--a-t-g-t-----c-ta---a--aa
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                 1028 16 -     18011 a-----c--------at-aa--a-t-g-t-----c-ta---a--aa
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         16959 18 -     38430 A-----A-ATTAAACCT-----------------T-GA---AA-AA
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    19037 24 -     42476 a-----c--------ttgaaccaat-g-t--tcaagag---a--aa
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3044382  6 +   3914936 ----------------------------------t-ga---a--aa
i Leptonychotes_weddellii.KB714746.1                     I 10 I 23
s Lepus_americanus.LepAme_scaffold_107385                     5093  2 +     14121 --------------------------------------------GC
i Lepus_americanus.LepAme_scaffold_107385                n 743 I 5
s Lipotes_vexillifer.KE559953.1                             270337 16 -    662738 a-----c--------ct-aa--a-t-g-t-----c-ta---a--aa
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1441527 17 +   1826925 a-----a--ctaaacct-----------------t-ga---aa-aa
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17957929  6 -  59628241 ----------------------------------t-ga---a--aa
i Lycaon_pictus.CM007581.1                               I 10 I 23
s Macaca_arctoides.k141_2326796                              11337 17 +     40492 a-----a--ctaaacct-----------------t-ga---aa-aa
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59680591 17 +  60120075 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 17108 17 -     26193 a-----a--gtaaacct-----------------t-ga---aa-aa
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            84886 17 -    114318 a-----a--ctaaacct-----------------t-ga---aa-aa
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 10575 17 -     23192 a-----a--ctaaacct-----------------t-ga---aa-aa
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                20041 17 -     29190 a-----a--ctaaacct-----------------t-ga---aa-aa
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  28619 17 +     37952 a-----a--ctaaacct-----------------t-ga---aa-aa
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186843694 17 + 187317192 A-----A--CTAAACct-----------------t-ga---aa-aa
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25462274 17 -  25927173 A-----A--CTAAAcct-----------------t-ga---aa-aa
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  84477 17 +     89720 a-----a--ctaaacct-----------------t-ga---aa-aa
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                11466 17 +     20474 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  11265 17 -     14993 a-----a--ctaaacct-----------------t-ga---aa-aa
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  334127 17 -    668171 a-----a--ctaaacct-----------------t-ga---aa-aa
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 9575 17 -     24072 a-----a--ctaaacct-----------------t-ga---aa-aa
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               30208 17 -     45290 a-----a--ctaaacct-----------------t-ga---aa-aa
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 93002 17 +     94391 a-----c--------tt-aa--a-t--at-----t-aa---a-aaa
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23941794 17 -  24302211 a-----a--ctaaacct-----------------t-ga---aa-aa
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355909 17 +    752769 a-----a--ctaaacct-----------------t-ga---aa-aa
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33105531 16 -  40650429 a-----ata------cc-aa--a--c----ct--t-ta---a----
i Marmota_marmota.CZRN01000018.1                         C 0 I 3
s Megaderma_lyra.MegLyr_scaffold_4542                        15529 17 -    207569 a-----c--------tt-aa--a--c-at-----t-ga---g-aaa
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             11641  6 +     13704 ----------------------------------t-ga---a--aa
i Mellivora_capensis.MelCap_flattened_line_69365         I 10 I 23
s Meriones_unguiculatus.MerUng_scaffold_7390                 35750  5 +    140813 ----------------------------------A-AA---AA---
i Meriones_unguiculatus.MerUng_scaffold_7390             I 5 I 3
s Mesoplodon_bidens.MesBid_scaffold_108144                    5715 16 +     10310 a-----c--------ct-aa--a-t-g-t-----c-ta---a--aa
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                17942 27 -     19307 a-----c--------ttgaac-aatcaatgttcaagaa---a--aa
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1852537 24 +   8254450 a-----c--------tt--GAACTGATGt--tcaagaa---a--aa
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             36221 24 +     64694 A-----C--------TT----GAACTGATGTTCAAGAA---A--AA
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                          13475 17 -     28506 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         7250  6 -      8324 ----------------------------------t-ga---a--aa
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 10 I 23
s Monodon_monoceros.MonMon_M_scaffold_103                    29461 16 -    437263 a-----c--------ct-aa--a-tc--t-----c-ta---a--aa
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 143531 24 -    366855 a-----c--------ttgaaccgat-g-t-c-caagaa---a--aa
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   3479 16 +     82753 a-----c--------ct-aa--a-t-g-t-----t-ga---a--aa
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   36487 16 +     37127 A-----C--------CT-----------CAACAAT-GA---A--AA
i Mungos_mungo.MunMun_flattened_line_23663               C 0 I 1
s Murina_feae.MurFea_scaffold_85699                           9288 24 +     14753 c-----c--------ttca-cc---cgatgttcaagag---a--aa
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84364107  4 - 120012414 ----------------------------------t-aa----a---
i Mus_caroli.LT608237.1                                  I 5 I 2
s Mus_musculus.chr8                                       87653612  4 - 129401213 ----------------------------------t-ga----a---
i Mus_musculus.chr8                                      I 5 I 2
s Mus_pahari.LT608297.1                                   31358331  7 -  89631738 ----------------------------------t-aaaaa-a---
i Mus_pahari.LT608297.1                                  I 5 I 2
s Mus_spretus.CM004101.1                                  90756102  4 - 130317789 ----------------------------------t-aa----a---
i Mus_spretus.CM004101.1                                 I 5 I 2
s Muscardinus_avellanarius.MusAve_scaffold_82313              7329 17 +     14296 a-----a--------cc-aa--a--c--t--t--a-aa---aa-aa
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 604
s Mustela_putorius.JH418006.1                               303030  6 -  14710649 ----------------------------------t-ga---a--aa
i Mustela_putorius.JH418006.1                            I 4 I 23
s Myocastor_coypus.MyoCoy_scaffold_10123                     73469  3 -     80779 ------A--------AC-----------------------------
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 I 13
s Myotis_brandtii.KE162005.1                                283036 24 -  10118263 a-----c--------ttgaaccaat-g-t--tcaagag---a--aa
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1590354 24 -   6019432 a-----c--------ttgaaccaat-g-t--tcaagag---a--aa
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3906466 24 -   4330536 a-----c--------ttgaaccaat-g-t--tcaagag---a--aa
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_44643                          768 24 +     25416 a-----c--------ttgaaccaat-g-t--tcaagag---a--aa
i Myotis_myotis.MyoMyo_scaffold_44643                    C 0 C 0
s Nannospalax_galili.KL204047.1                            2039184 14 -   3037898 a-----a--------cc-a-----------GATTT-GA---AA---
i Nannospalax_galili.KL204047.1                          C 0 I 2
s Nasalis_larvatus.k141_413338                               19530 17 +     21681 a-----a--ctaaacct-----------------t-ga---aa-aa
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20308843  6 +  31847680 ----------------------------------t-ga---a--aa
i Neomonachus_schauinslandi.NINY01007730.1               I 10 I 23
s Neophocaena_asiaeorientalis.KZ687982.1                   5868424 16 +   7148211 a-----c--------ct-aa--a-t-g-t-----c-ta---a--aa
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    759722 23 +    783361 A-----C--------TT----GAACCAATGTTCAA-AA---C--AA
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9151861  6 -   9404916 ----------------------------------t-ga---a--aa
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 10 I 23
s Ochotona_princeps.JH802162.1                             1367222 15 +   3988456 a-----g--------ca-aa--a---g-t--t--T-CA---AT---
i Ochotona_princeps.JH802162.1                           C 0 I 12
s Odobenus_rosmarus.KB229312.1                              507985  6 -   2017862 ----------------------------------t-aa---a--aa
i Odobenus_rosmarus.KB229312.1                           I 10 I 23
s Octodon_degus.JH651603.1                                  750494  4 +  11899542 a-----a--------gc-----------------------------
i Octodon_degus.JH651603.1                               C 0 I 13
s Odocoileus_virginianus.KZ100018.1                         147000 16 +    630418 a-----c--------ct-aa--a-t-g-t-----t-ca---a--aa
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          81113 16 -    150152 a-----c--------tt-aa--a-t-g-t-----t-ga---a--aa
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                     2140 15 +    140218 a-----a--------at-aa--a-t--at-----t-aa---aa---
i Ondatra_zibethicus.OndZib_scaffold_7387                I 1555 T 1553
s Onychomys_torridus.OnyTor_scaffold_2986                    83513 15 +    102263 A-----A--------CT-----------AAACATT-AA---AG---
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 2
s Orcinus_orca.KB316932.1                                  2784317 16 -  10937097 a-----c--------ct-aa--a-t-g-t-----c-ta---a--aa
i Orcinus_orca.KB316932.1                                C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107181374  2 - 174332312 --------------------------------------------GC
i Oryctolagus_cuniculus.CM000791.1                       n 1414 I 5
s Otocyon_megalotis.JAEUCK010005147.1                       465285  6 -    559221 ----------------------------------t-ga---a--aa
i Otocyon_megalotis.JAEUCK010005147.1                    I 10 I 23
s Ovis_aries.CM001607.2                                   17589782 16 +  44047080 a-----a--------ct-aa--a-t-g-t-----t-ga---a--aa
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      177984 16 -    191736 A-----A--------CT-----------AAATGTT-GA---A--AA
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    48541 17 +     80009 A-----A--CTAAACCT-----------------T-ga---ta-aa
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189147407 18 + 189151597 a-----a-actaaacct-----------------t-ga---ta-aa
i Pan_troglodytes.CM009242.2                             C 0 I 12
s Panthera_onca.PanOnc_flattened_line_3271                  153388 16 +    230217 a-----c--------ct---c-aat--a--c---t-ga---a--aa
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 1
s Panthera_pardus.KV860321.1                                266699 16 +  18783137 a-----c--------ct---c-aat--a--c---t-ga---a--aa
i Panthera_pardus.KV860321.1                             C 0 I 1
s Panthera_tigris.KE722367.1                               4723524 16 -   8748460 a-----c--------ct---c-aat--a--c---t-ga---a--aa
i Panthera_tigris.KE722367.1                             C 0 I 1
s Pantholops_hodgsonii.KE114653.1                          1268718 16 -   2937107 a-----a--------ct-aa--a-t-g-t-----t-ga---a--aa
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183447600 17 + 183742232 A-----A--CTAAACct-----------------t-ga---aa-aa
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            11250 17 +     20448 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20568058 17 +  20919399 a-----a--ctaaacct-----------------t-ga---aa-aa
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                  10004 17 +     41871 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    13283 17 +     27711 a-----a--ctaaacct-----------------t-ga---aa-aa
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  4282 17 -     11374 a-----a--ctaaacct-----------------t-ga---aa-aa
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14813 16 -     78924 a-----c--------ct---c-aa-c-a--c---t-ga---a--aa
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 1
s Peromyscus_maniculatus.KI615324.1                       18214249 15 -  18517816 A-----A--------CT-----------GAACATT-AA---AG---
i Peromyscus_maniculatus.KI615324.1                      C 0 I 2
s Petromus_typicus.PetTyp_scaffold_221660                      904  4 -      2102 A-----A--------TC-----------------------------
i Petromus_typicus.PetTyp_scaffold_221660                C 0 I 14
s Phocoena_phocoena.PhoPho_flattened_line_24159              11386 16 +     63832 a-----c--------ct-aa--a-t-g-t-----c-ta---a--aa
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            2642 17 +     68526 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        42779 17 +     89929 a-----a--gtaaacct-----------------t-ga---aa-aa
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            44195 17 +     51399 a-----a--gtaaacct-----------------t-ga---aa-aa
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14300431 17 -  14605196 A-----A--GTAAACct-----------------t-ga---aa-aa
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             4105 24 +     22620 A-----C--------TT----GAACCCATGTTCAAGAG---A--AA
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pithecia_albicans.k141_1476471                              6180 15 +     26961 ---------CTAAACCT-----------------T-GA---AA-AA
i Pithecia_albicans.k141_1476471                         I 1 C 0
s Pithecia_chrysocephala.k141_839575                          2308 15 +     23417 ---------CTAAACCT-----------------T-GA---AA-AA
i Pithecia_chrysocephala.k141_839575                     I 1 C 0
s Pithecia_hirsuta.k141_305604                                6172 15 +     29694 ---------CTAAACCT-----------------T-GA---AA-AA
i Pithecia_hirsuta.k141_305604                           I 1 C 0
s Pithecia_mittermeieri.k141_446740                          31198 15 +     52772 ---------CTAAACCT-----------------T-GA---AA-AA
i Pithecia_mittermeieri.k141_446740                      I 1 C 0
s Pithecia_pissinattii.k141_1824269                           6194 15 +     26198 ---------CTAAACCT-----------------T-GA---AA-AA
i Pithecia_pissinattii.k141_1824269                      I 1 C 0
s Pithecia_pithecia.tarseq_165                             3942725 15 +   4542175 ---------CTAAACCT-----------------T-GA---AA-AA
i Pithecia_pithecia.tarseq_165                           I 1 C 0
s Pithecia_vanzolinii.k141_1697688                            6158 15 -     23490 ---------CTAAACCT-----------------T-GA---AA-AA
i Pithecia_vanzolinii.k141_1697688                       I 1 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610            692 16 +      7680 a-----c--------ct-aa--a-t-g-t-----c-ta---a--aa
i Platanista_gangetica.PlaMin_flattened_line_173610      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       10416 17 -     39866 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        19580 17 +     34906 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       23842 17 +     87950 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     24671 17 +     88961 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         10339 17 +     39403 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          24122 17 -     87928 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         31083 17 +     60166 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      31279 17 +     67232 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          26752 17 +     90634 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          24125 17 -     89403 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189135559 17 + 189387572 A-----A--CTAAACct-----------------t-ga---aa-aa
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9575169 17 +   9816681 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               77711 17 -     81375 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              9542 17 +     19060 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            13385  5 -     21651 ----------------------------------t-aa---aa---
i Psammomys_obesus.NESX01036370.1                        I 6 I 3
s Pteronotus_parnellii.KE909381.1                            17014 24 -     21811 a-----c--------ttgatcc----gatgttcaagaa---a--aa
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41843  6 +     42204 ----------------------------------T-TA---A--AA
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 10 I 23
s Pteropus_alecto.KB030862.1                              22979088 17 +  28871421 a-----t--------tt-aa--a-t--at-----t-ga---a-aaa
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1362073 17 +   4952924 a-----t--------tt-aa--a-t--at-----t-ga---a-aaa
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20276587 16 -  38429054 a-----c--------ct---c-aat--a--c---t-ga---a--aa
i Puma_concolor.QAVW01001104.1                           C 0 I 1
s Pygathrix_cinerea.k141_1153803                             19522 17 -     91421 a-----a--ctaaacct-----------------t-ga---aa-aa
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7613649 17 +   7812017 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             19554 17 -     72585 a-----a--ctaaacct-----------------t-ga---aa-aa
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  8835 16 +     55207 a-----c--------ct-aa--a-t-g-t-----t-ca---a--aa
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53573693  7 +  90668790 aattaaa---------------------------------------
i Rattus_norvegicus.chr16                                C 0 I 10
s Rhinolophus_sinicus.LVEH01000134.1                        369136 17 -   3329780 a-----c--------tt-aa--a--c-at-----t-ga---a-aaa
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_1041714                             116 17 +      5697 a-----a--ctaaacct-----------------t-ga---aa-aa
i Rhinopithecus_bieti.k119_1041714                       C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91240590 17 - 195417433 A-----A--CTAAACct-----------------t-ga---aa-aa
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7676237 17 +   7961872 a-----a--ctaaacct-----------------t-ga---aa-aa
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                90161 17 -     96226 A-----C--------TT-----------AAATGTT-GA---A-AAA
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_133311                       1319 16 +      9503 a-----a--------ct-aa--a-t-g-t-----t-ga---a--aa
i Saiga_tatarica.SaiTat_scaffold_133311                  C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    155428 16 -    313613 a-----t--------ct-aa--a--cg-t-----t-ga---a--aa
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                         4392 17 -     12572 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      31244 17 +     39453 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           11748 17 +     27826 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            11293 17 -     19483 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      4591 17 -     12762 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           4434 17 +     13763 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     3281 15 -     30804 A-----A--------CT-----------AAATTTT-AA---AA---
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 I 2
s Sorex_araneus.JH798187.1                                13653269 13 -  18376816 ----------------T-------GGg-t--t-tg-aa---a--aa
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1956340 16 -   3870691 a-----ata------cc-aa--a--c----ct--t-ta---a----
i Spermophilus_dauricus.KZ294078.1                       C 0 I 3
s Spilogale_gracilis.SpiGra_flattened_line_13525             32319  5 +     97271 ----------------------------------t-ga---a---a
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 10 I 23
s Suricata_suricatta.SurSur_flattened_line_6629              20820 16 -    196729 A-----C--------CT-----------CAACAAT-GA---A--AA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 1
s Sus_scrofa.CM000828.4                                    6813960 16 +  69701581 a-----c--------ct-a-------gatac---t-ga---g--aa
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                13487 24 +     41958 a-----c--------ttgaacc----gatgttccagaa---a--aa
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Theropithecus_gelada.CM009954.1                        186432908 17 + 186847797 A-----A--CTAAACct-----------------t-ga---aa-aa
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              107573  4 +    114563 A-----G--------CC-----------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 14
s Tolypeutes_matacus.TolMat_scaffold_85600                    4688 16 +     18632 g-----c--------ct-aa--a-t-g-t-----t-ga---c--aa
i Tolypeutes_matacus.TolMat_scaffold_85600               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     83287 28 +    610378 g-----c--------atgaactgatcgatgctcaagaa---a--aa
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         15330 17 -     20410 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      4455 17 -     12674 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       15438 17 +     19930 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      11838 17 -     19997 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            51981 17 -     60166 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        19444 17 -     27529 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                       1074 17 +      9229 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          12976 17 -     21137 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                    1076 17 +      9131 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                         1042 17 -      3730 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        29310 17 +     32220 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5943407 17 +   6242583 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       12659 17 +     20839 A-----A--CTAAACCT-----------------T-GA---AA-AA
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    2712 16 +     27266 A-----A--------CT-----------AAATGTT-GA---A--AA
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tupaia_chinensis.KB320699.1                              2159744 17 +   4065304 a-----a--------ct-a----------AACCTT-GA---AA-AA
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_306982                    1768 17 -      4186 A-----A--------TT-----------AAACCAT-GA---AA-AA
i Tupaia_tana.TupTan_flattened_line_306982               C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15740570 16 +  33153633 a-----c--------ct-aa--a-t-g-t-----c-ta---a--aa
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   55520 16 -     77625 a-----t--------ca-aa--a-t-g-t-----t-gg---a--aa
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4851703  6 -   5085361 ----------------------------------t-ga---a--aa
i Ursus_maritimus.KK499267.1                             I 10 I 23
s Vicugna_pacos.KN270157.1                                 5374229 16 -   5488506 g-----t--------gt-aa--a-t-g-t-----t-ga---a--aa
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 13395  6 -     43706 ----------------------------------t-ga---a--aa
i Vulpes_lagopus.VulLag_flattened_line_30954             I 10 I 23
s Xerus_inauris.XerIna_scaffold_2302                          3414 16 +    224448 a-----ata------cc-aa--a--c-at-----t-ga---a----
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 3
s Zapus_hudsonius.ZapHud_scaffold_11398                      16963  5 +     63895 ----------------------------------T-GA---AA---
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 6 I 2
s Ziphius_cavirostris.ZipCav_flattened_line_761354             870 16 -      1267 a-----c--------ct-aa--a-t-g-t-----c-ta---a--aa
i Ziphius_cavirostris.ZipCav_flattened_line_761354       C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tarsius_wallacei.k141_254427                                3115  0 -     16117 C
e Tarsius_lariang.k141_2201908                               28318  0 +     70052 C
e Tapirus_terrestris.TapTer_scaffold_755                    389823 643 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      121344 643 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184766 1004 -  29670104 I
e Manis_pentadactyla.KN006162.1                              53022 987 -    317179 I
e Manis_javanica.JSZB01003497.1                              20877 990 +    737560 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Jaculus_jaculus.JH725527.1                               8278673 121 -   9596543 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               35993 651 +    498745 I
e Equus_caballus.CM000403.2                               18533964 651 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1286155 651 +   4378816 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    8624 649 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  675871 642 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5047 647 -     25243 I
e Cephalopachus_bancanus.k141_1423433                         7319  0 +     31688 C
e Carlito_syrichta.NW_007259797.1                           157824  0 -    496798 C
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Allactaga_bullata.AllBul_scaffold_9566                     75924 121 -     89534 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      11210 12 +     62944 T-AAG-AGAA-AAGT
s Acinonyx_jubatus.LLWD01001279.1                           829590  9 -   1699592 t-ag----aa-tggt
i Acinonyx_jubatus.LLWD01001279.1                        I 1 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     73727  4 +     87051 -----------AGAT
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 3 C 0
s Allenopithecus_nigroviridis.k141_3361533                   19045 12 -     52922 t-aag-agaa-aagt
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         18981 12 -     28001 t-aag-agaa-aagt
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                          9476 12 -     18505 t-aag-agaa-aagt
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                          10329 12 -     12518 t-aag-agaa-aagt
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             10688  4 +     51355 -----------AAGT
i Alouatta_belzebul.k141_3560514                         I 3 C 0
s Alouatta_caraya.k141_1701091                                3794  4 -     36483 -----------AAGT
i Alouatta_caraya.k141_1701091                           I 3 C 0
s Alouatta_discolor.k141_566626                              14248  4 +     28687 -----------AAGT
i Alouatta_discolor.k141_566626                          I 3 C 0
s Alouatta_juara.k141_1302312                                 2720  4 +     27940 -----------AAGT
i Alouatta_juara.k141_1302312                            I 3 C 0
s Alouatta_macconnelli.k141_918386                            3808  4 -      9457 -----------AAGT
i Alouatta_macconnelli.k141_918386                       I 3 C 0
s Alouatta_nigerrima.k141_1929159                             2766  4 +     30492 -----------AAGT
i Alouatta_nigerrima.k141_1929159                        I 3 C 0
s Alouatta_palliata.k141_2135620                              6980 12 +     47717 T-AAG-AGAA-AAGT
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              3488  4 +      5663 -----------AAGT
i Alouatta_puruensis.k141_362188                         I 3 C 0
s Alouatta_seniculus.k141_117119                             17939  4 +     50774 -----------AAGT
i Alouatta_seniculus.k141_117119                         I 3 C 0
s Ammotragus_lervia.NIVO01071767.1                          679732  9 -   2318259 a-cag-aaaa-a---
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      187468 12 +    412891 t-ggg-agat-tgat
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303              1012  9 -     32520 A-CAG-AAAA-C---
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      14943 12 +     20879 T-AGA-AGAA-TGGT
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 3 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6878 12 +     43469 t-ggg-agat-tgat
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21211175 12 -  21539123 T-AAG-AGAA-AAGT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               45974 12 -     48001 T-AAG-AGAA-AAGT
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 28775 12 -     30947 T-AAG-AGAA-AAGT
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               10550 12 -     89868 T-AAG-AGAA-AAGT
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              14932 12 -     40414 T-AAG-AGAA-AAGT
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                22820 12 +     72325 T-AAG-AGAA-AAGT
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15194209 12 +  23207421 a-tag-aaaa-tgag
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         4674 12 -     18090 a-tag-aaaa-tgag
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    30824  9 +     34529 A-CAG-AAAA-A---
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    203447  9 -    288883 a-cag-aaaa-a---
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20276685  9 +  48749331 a-cag-aaaa-a---
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1129239  9 -   1948126 a-cag-aaaa-a---
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18087323  9 +  45695690 a-cag-aaaa-a---
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2823276  9 +   4408762 a-cag-aaaa-a---
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                103795 12 -    122966 T-AAG-AGAA-AAGT
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   63298 12 +     81800 T-AAG-AGAA-AAGT
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  32480 12 -     95584 T-AAG-AGAA-AAGT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         56581 12 -    119600 T-AAG-AGAA-AAGT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10004729 12 -  17673402 a-tag-aaaa-tggt
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2337201 12 -   7040546 a-tag-aaaa-tggt
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  405499 12 -   1652518 a-tag-aaaa-tggt
i Camelus_ferus.KB017975.1                               C 0 C 0
s Capra_aegagrus.CM003241.1                               18833742  9 +  46296322 a-cag-aaaa-a---
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18064559  9 -  44709034 a-cag-aaaa-a---
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    3303 11 -     12242 C-AGG-AGA--TGGC
i Capromys_pilorides.CapPil_scaffold_65020               I 13 C 0
s Carlito_syrichta.NW_007259797.1                           157824  7 -    496798 -------TAA-TTTT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                7219 12 -     11696 t-ggg-agat-tgat
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    139794 12 +    179628 t-agg-acaa-agat
i Castor_canadensis.CasCan_scaffold_2074                 I 2 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     96391 13 +    217609 a-tagaaaaa-tgat
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18351856 12 -  23392119 N-NNN-NNN-NNNNN
i Cavia_aperea.AVPZ01000300.1                            I 13 C 0
s Cavia_porcellus.DS562891.1                              18364116 12 -  23407841 c-aga-aga-atggT
i Cavia_porcellus.DS562891.1                             I 13 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                       102998 12 +    143979 C-AGA-AGA-ATGGT
i Cavia_tschudii.CavTsc_scaffold_8919                    I 13 C 0
s Cephalopachus_bancanus.k141_1423433                         7319  7 +     31688 -------TAT-TTTT
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4479997 12 +   4669795 t-aag-agaa-aagt
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        4496 12 +     17872 t-aag-agaa-aagt
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           5086 12 -     14043 t-aag-agaa-aagt
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          13184 12 +     27781 T-AAG-AGAA-AAGT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        13345 12 -     20310 t-aag-agaa-aagt
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          16317 12 +     29689 T-AAG-AGAA-AAGT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           11077 12 -     20078 T-AAG-AGAA-AAGT
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          18988 12 -     27936 T-AAG-AGAA-AAGT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            7863 12 -     17152 T-AAG-AGAA-AAGT
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38827589 12 +  39242232 T-AAG-AGAA-AAGT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21227095 12 -  21565898 T-AAG-AGAA-AAGT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       44214 12 -     53127 t-aag-agaa-aagt
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        4466 12 +     13442 T-AAG-AGAA-AAGT
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       19010 12 -     27947 T-AAG-AGAA-AAGT
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         2037 12 +     10558 T-AAG-AGAA-AAGT
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          5042 12 +     14005 t-aag-agaa-aagt
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            6631  4 -      8501 a-tgg----------
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 I 3
s Cheracebus_lucifer.k141_49986                               2401 12 -     17098 T-AAG-AGAA-AAGT
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              2277 12 +     17877 T-AAG-AGAA-AAGT
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            159844 12 -    216457 T-AAG-AGAA-AAGT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          64313 12 +     76511 T-AAG-AGAA-AAGT
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1255041 11 +   2543920 c-aGG-AGA--CTCT
i Chinchilla_lanigera.JH722012.1                         I 102 I 540
s Chiropotes_israelita.k141_747660                          100924 12 +    146308 T-AAG-AGAA-AAGT
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          32731 12 -     50570 T-AAG-AGAA-AAGT
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18432912 12 -  18827391 t-aag-agaa-aagt
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       19409 12 -     50209 t-aag-agaa-aagt
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135426415 12 + 135778131 t-aag-agaa-aagt
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1914952 12 +   2368649 t-aag-agaa-aagt
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199953194 12 + 200372422 T-AAG-AGAA-AAGT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              41503 11 +     84244 T-AAG--GAA-AAGT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17551122 12 -  53390261 c-agg-agaa-tgac
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           3106 12 +     23735 t-aag-agaa-tggt
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 52982 12 +     63868 t-agg-agaa-taat
i Cricetomys_gambianus.CriGam_scaffold_18520             I 2 C 0
s Cricetulus_griseus.LT883664.1                           11668757 12 + 224834208 T-AGG-AGAA-TCAT
i Cricetulus_griseus.LT883664.1                          I 2 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               5037 12 -     19598 T-AGG-ATAA-TGGT
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 I 2
s Cryptoprocta_ferox.CryFer_flattened_line_16129             30768  9 -     87169 t-ag----aa-ttgt
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 1 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  38232 11 +     51376 C-AGG-AGA--CAGT
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 13 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900             2061  9 -     75252 C-A----GA-ATAGC
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 13 C 0
s Dasypus_novemcinctus.JH564415.1                            69655  4 +   2246927 a-tag----------
i Dasypus_novemcinctus.JH564415.1                        C 0 I 3
s Delphinapterus_leucas.KZ290073.1                        16814092 12 +  35494412 a-tag-aaaa-tgag
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8632223 12 +  20541912 t-ggg-agat-tgat
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    38521 11 +     67921 C-TGG-AGA--CCCc
i Dinomys_branickii.DinBra_scaffold_21862                I 102 I 511
s Dolichotis_patagonum.DolPat_scaffold_30833                 35576 12 -     42551 C-AGG-ACA-ATGGT
i Dolichotis_patagonum.DolPat_scaffold_30833             I 13 C 0
s Eidolon_helvum.AWHC01278734.1                                897 12 +      2334 t-aaa-agaa-taat
i Eidolon_helvum.AWHC01278734.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       314214  9 +    607251 a-cag-aaaa-c---
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          23510 12 -    110024 T-AGG-AGAA-TGAT
i Ellobius_lutescens.LOEQ01008920.1                      I 2 C 0
s Ellobius_talpinus.LOJH01081419.1                            3420 12 +      8657 T-AGG-AGAA-TGAT
i Ellobius_talpinus.LOJH01081419.1                       I 2 C 0
s Eptesicus_fuscus.JH977646.1                              2149356 12 -  14770903 t-aga-agac-tgat
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Erythrocebus_patas.Contig38                             21209586 12 -  21539334 T-AAG-AGAA-AAGT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           13520 12 +    133382 a-tag-aaaa-tgag
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             27467 12 -     44125 a-tag-aaaa-tgag
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20239334  9 + 206538554 t-ag----aa-tggt
i Felis_catus.CM001381.2                                 I 1 C 0
s Felis_catus_fca126.CM031415.1                           20198209  9 + 205367284 t-ag----aa-tggt
i Felis_catus_fca126.CM031415.1                          I 1 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 11869  9 -     36744 t-ag----aa-tggt
i Felis_nigripes.FelNig_flattened_line_20823             I 1 C 0
s Fukomys_damarensis.KN121974.1                             852655  9 +   3816255 C-AAG-AGAA----T
i Fukomys_damarensis.KN121974.1                          I 42 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               4927 12 -      9135 t-agg-agaa-tggt
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     611449  9 -    660261 a-cag-aaaa-c---
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            34475 12 +     49224 t-agg-aGAA-TTTT
i Glis_glis.GliGli_scaffold_19807                        I 850 C 0
s Gorilla_beringei.k141_3596273                              20436 12 -     32273 T-AAG-AGAA-AAGT
i Gorilla_beringei.k141_3596273                          C 0 I 19
s Gorilla_gorilla.LT578341.1                             186342572 12 + 186649187 t-aag-agaa-aagt
i Gorilla_gorilla.LT578341.1                             C 0 I 19
s Graphiurus_murinus.GraMur_scaffold_10447                   36319 12 +     78134 T-AGG-AGAA-ATTT
i Graphiurus_murinus.GraMur_scaffold_10447               I 662 C 0
s Helogale_parvula.HelPar_flattened_line_2585               244577  9 +    327341 T-AG----AA-AGGT
i Helogale_parvula.HelPar_flattened_line_2585            I 1 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 22047  9 +     36099 a-cag-aaaa-a---
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112951 12 +    128679 a-tag-aaag-tgat
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       112691  9 +   1711038 t-ggg-agaa-t---
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188               1263  9 +      9903 t-agg-agaa-t---
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 C 0
s Hoolock_leuconedys.ctg274                                    439257 12 +    630532 T-AAG-AGAA-AAGT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  47316  9 +     55795 C-AG----AA-CGCT
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 1 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23832 12 -    143317 C-AGG-AGA-ATCAT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 13 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      85134 12 +    135385 C-ATG-AGAA-TGGT
i Hystrix_cristata.HysCri_scaffold_5660                  I 13 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7523206 12 -   7955117 t-agg-agaa-tggt
i Ictidomys_tridecemlineatus.JH393364.1                  I 3 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                1298 12 -     31341 a-tag-aaaa-tgag
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                 1044 12 -     18011 a-tag-aaca-tgag
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         16977 12 -     38430 T-AAG-AGAA-AAGT
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    19061 12 -     42476 t-aga-agac-tgat
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 1176
s Lepus_americanus.LepAme_scaffold_107385                     5100  1 +     14121 --------------C
i Lepus_americanus.LepAme_scaffold_107385                I 5 C 0
s Lipotes_vexillifer.KE559953.1                             270353 12 -    662738 a-tag-aaaa-tgag
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1441544 12 +   1826925 t-aag-agaa-aagt
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                              11354 12 +     40492 t-aag-agaa-aagt
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59680608 12 +  60120075 T-AAG-AGAA-AAGT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 17125 12 -     26193 t-agg-agaa-aagt
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            84903 12 -    114318 t-aag-agaa-aagt
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 10592 12 -     23192 t-aag-agaa-aagt
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                20058 12 -     29190 t-aag-agaa-aagt
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  28636 12 +     37952 t-aag-agaa-aagt
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186843711 12 + 187317192 t-aag-agaa-aagt
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25462291 12 -  25927173 t-aag-agaa-aagt
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  84494 12 +     89720 t-aag-agaa-aagt
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                11483 12 +     20474 T-AAG-AGAA-AAGT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  11282 12 -     14993 t-aag-agaa-aagt
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  334144 12 -    668171 t-aag-agaa-aagt
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                 9592 12 -     24072 t-aag-agaa-aagt
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               30225 12 -     45290 t-aag-agaa-aagt
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_8222                 93019 12 +     94391 t-aaa-agaa-tgat
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23941811 12 -  24302211 t-aag-agaa-aagt
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355926 12 +    752769 t-aag-agaa-aagt
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33105550 12 -  40650429 t-agg-agaa-tggt
i Marmota_marmota.CZRN01000018.1                         I 3 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        15546 12 -    207569 t-agg-agaa-tgat
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 35758 12 +    140813 T-AGG-AGAA-TGAT
i Meriones_unguiculatus.MerUng_scaffold_7390             I 3 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    5731 12 +     10310 a-tag-aaaa-tgag
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                17969 12 -     19307 t-ggg-agat-tgat
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1852561 12 +   8254450 c-aga-agaa-tgat
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             36245 12 +     64694 C-AGa-agaa-tgat
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                          13492 12 -     28506 T-AAG-AGAA-AAGT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    29477 12 -    437263 a-tag-aaaa-tgag
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 143555 12 -    366855 t-gag-aggt-tgat
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   3495  9 +     82753 a-cag-aaaa-c---
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_23663                   36504  9 +     37127 C-AG----AA-AGGT
i Mungos_mungo.MunMun_flattened_line_23663               I 1 C 0
s Murina_feae.MurFea_scaffold_85699                           9312 12 +     14753 t-aga-agac-tgat
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84364113 12 - 120012414 t-gca-agaa-caat
i Mus_caroli.LT608237.1                                  I 2 C 0
s Mus_musculus.chr8                                       87653618 12 - 129401213 t-gca-agaa-caat
i Mus_musculus.chr8                                      I 2 C 0
s Mus_pahari.LT608297.1                                   31358340 12 -  89631738 t-gca-agaa-caat
i Mus_pahari.LT608297.1                                  I 2 C 0
s Mus_spretus.CM004101.1                                  90756108 12 - 130317789 t-gca-agaa-caat
i Mus_spretus.CM004101.1                                 I 2 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              7950 12 +     14296 T-AGG-GAAA-ATTT
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 604 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     73485 11 -     80779 C-AGG-AGA--TGGT
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 13 C 0
s Myotis_brandtii.KE162005.1                                283060 12 -  10118263 t-aga-agac-tggt
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1590378 12 -   6019432 t-aga-agac-tgat
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3906490 12 -   4330536 t-aga-agac-tggt
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_44643                          792 12 +     25416 t-aga-agac-tggt
i Myotis_myotis.MyoMyo_scaffold_44643                    C 0 C 0
s Nannospalax_galili.KL204047.1                            2039200 12 -   3037898 T-AGT-AGAA-TGTT
i Nannospalax_galili.KL204047.1                          I 2 C 0
s Nasalis_larvatus.k141_413338                               19547 12 +     21681 t-aag-agaa-aagt
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5868440 12 +   7148211 a-tag-aaaa-tgag
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    759745 12 +    783361 T-GGG-AGAT-TGAT
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Ochotona_princeps.JH802162.1                             1367249  1 +   3988456 --------------C
i Ochotona_princeps.JH802162.1                           I 12 C 0
s Octodon_degus.JH651603.1                                  750511  2 +  11899542 c-a------------
i Octodon_degus.JH651603.1                               I 13 I 17
s Odocoileus_virginianus.KZ100018.1                         147016  9 +    630418 a-cag-aaaa-c---
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          81129  9 -    150152 a-cag-gaaa-c---
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                      602 12 +    140218 T-AGG-AGAA-TAAT
i Ondatra_zibethicus.OndZib_scaffold_7387                T 1553 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    83530 12 +    102263 A-AGG-AGAA-TGAT
i Onychomys_torridus.OnyTor_scaffold_2986                I 2 C 0
s Orcinus_orca.KB316932.1                                  2784333 12 -  10937097 a-tag-aaaa-tgag
i Orcinus_orca.KB316932.1                                C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107181381  1 - 174332312 --------------C
i Oryctolagus_cuniculus.CM000791.1                       I 5 C 0
s Ovis_aries.CM001607.2                                   17589798  9 +  44047080 a-cag-aaaa-a---
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      178000  9 -    191736 A-CAG-AAAA-A---
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    48558 12 +     80009 t-aag-agaa-aagt
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03002948.1                             24479 13 +     28717 TTAAG-AGAA-AAGT
i Pan_troglodytes.NBAG03002948.1                         I 403 I 61
s Panthera_onca.PanOnc_flattened_line_3271                  153405  9 +    230217 t-ag----aa-tggt
i Panthera_onca.PanOnc_flattened_line_3271               I 1 C 0
s Panthera_pardus.KV860321.1                                266716  9 +  18783137 t-ag----aa-tggt
i Panthera_pardus.KV860321.1                             I 1 C 0
s Panthera_tigris.KE722367.1                               4723541  9 -   8748460 t-ag----aa-tggt
i Panthera_tigris.KE722367.1                             I 1 C 0
s Pantholops_hodgsonii.KE114653.1                          1268734  9 -   2937107 a-cag-aaaa-a---
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183447617 12 + 183742232 t-aag-agaa-aagt
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            11267 12 +     20448 T-AAG-AGAA-AAGT
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20568075 12 +  20919399 t-aag-agaa-aagt
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                  10021 12 +     41871 T-AAG-AGAA-AAGT
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    13300 12 +     27711 t-aag-agaa-aagt
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  4299 12 -     11374 t-aag-agaa-aagt
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14830  8 -     78924 t-aa----aa-t-gt
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 1 C 0
s Peromyscus_maniculatus.KI615324.1                       18214266 12 -  18517816 T-AGG-AGAA-TGAT
i Peromyscus_maniculatus.KI615324.1                      I 2 C 0
s Petromus_typicus.PetTyp_scaffold_221660                      922 12 -      2102 C-ATG-AGAA-TGGT
i Petromus_typicus.PetTyp_scaffold_221660                I 14 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              11402 12 +     63832 a-tag-aaaa-tgag
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            2659 12 +     68526 T-AAG-AGAA-AAGT
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        42796 12 +     89929 t-aag-agaa-aagt
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            44212 12 +     51399 t-aag-agaa-aagt
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14300448 12 -  14605196 t-aag-agaa-aagt
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             4129 12 +     22620 T-AGA-AGAC-TGAT
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pithecia_albicans.k141_1476471                              6195 12 +     26961 T-AAG-AGAA-AAGT
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          2323 12 +     23417 T-AAG-AGAA-AAGT
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                6187 12 +     29694 T-AAG-AGAA-AAGT
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          31213 12 +     52772 T-AAG-AGAA-AAGT
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           6209 12 +     26198 T-AAG-AGAA-AAGT
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3942740 12 +   4542175 T-AAG-AGAA-AAGT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            6173 12 -     23490 T-AAG-AGAA-AAGT
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610            708 12 +      7680 a-tag-aaaa-tgag
i Platanista_gangetica.PlaMin_flattened_line_173610      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       10433 12 -     39866 T-AAG-AGAA-AAGT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        19597 12 +     34906 T-AAG-AGAA-AAGT
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       23859 12 +     87950 T-AAG-AGAA-AAGT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     24688 12 +     88961 T-AAG-AGAA-AAGT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         10356 12 +     39403 T-AAG-AGAA-AAGT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          24139 12 -     87928 T-AAG-AGAA-AAGT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         31100 12 +     60166 T-AAG-AGAA-AAGT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      31296 12 +     67232 T-AAG-AGAA-AAGT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          26769 12 +     90634 T-AAG-AGAA-AAGT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          24142 12 -     89403 T-AAG-AGAA-AAGT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189135576 12 + 189387572 t-aag-agaa-aagt
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9575186 12 +   9816681 T-AAG-AGAA-AAGT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               77728 12 -     81375 T-AAG-AGAA-AAGT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                              9559 12 +     19060 T-AAG-AGAA-AAGT
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            13393 12 -     21651 t-aag-agaa-tgat
i Psammomys_obesus.NESX01036370.1                        I 3 C 0
s Pteronotus_parnellii.KE909381.1                            17038 12 -     21811 t-ggg-agat-tgag
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteropus_alecto.KB030862.1                              22979105 12 +  28871421 t-aaa-agaa-tgat
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1362090 12 +   4952924 t-aaa-agaa-tgat
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20276604  9 -  38429054 t-ag----aa-tggt
i Puma_concolor.QAVW01001104.1                           I 1 C 0
s Pygathrix_cinerea.k141_1153803                             19539 12 -     91421 t-aag-agaa-aagt
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7613666 12 +   7812017 T-AAG-AGAA-AAGT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             19571 12 -     72585 t-aag-agaa-aagt
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  8851  9 +     55207 a-cag-aaaa-c---
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53573710 12 +  90668790 t-ggg-agaa-caat
i Rattus_norvegicus.chr16                                I 10 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        369153 12 -   3329780 t-aga-agaa-tgag
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_1041714                             133 12 +      5697 t-aag-agaa-aagt
i Rhinopithecus_bieti.k119_1041714                       C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91240607 12 - 195417433 t-aag-agaa-aagt
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7676254 12 +   7961872 t-aag-agaa-aagt
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                90178 12 -     96226 T-AAA-AGAA-TAAT
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_133311                       1335  9 +      9503 a-cag-aaaa-a---
i Saiga_tatarica.SaiTat_scaffold_133311                  C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    155444 12 -    313613 g-agg-agaa-tggc
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                         4409 12 -     12572 T-AAG-AGAA-AAGT
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      31261 12 +     39453 T-AAG-AGAA-AAGT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           11765 12 +     27826 T-AAG-AGAA-AAGT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            11310 12 -     19483 T-AAG-AGAA-AAGT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      4608 12 -     12762 T-AAG-AGAA-AAGT
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           4451 12 +     13763 T-AAG-AGAA-AAGT
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     3298 12 -     30804 T-AGG-ATAA-TGAT
i Sigmodon_hispidus.SigHis_scaffold_42075                I 2 C 0
s Sorex_araneus.JH798187.1                                13653282 12 -  18376816 t-aag-atta-tGGT
i Sorex_araneus.JH798187.1                               C 0 I 1
s Spermophilus_dauricus.KZ294078.1                         1956359 12 -   3870691 t-agg-agaa-tggt
i Spermophilus_dauricus.KZ294078.1                       I 3 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              20837  9 -    196729 T-AG----AA-AGGT
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 C 0
s Sus_scrofa.CM000828.4                                    6813976 13 +  69701581 a-tagagaaa-tgat
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                13511  9 +     41958 t-a----gaa-tgat
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tarsius_lariang.k141_2201908                               28318  7 +     70052 -------TAA-TTTT
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                3115  7 -     16117 -------TAA-TTTT
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186432925 12 + 186847797 t-aag-agaa-aagt
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              107591 13 +    114563 CTGTG-AGAA-TGGT
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 14 C 0
s Tolypeutes_matacus.TolMat_scaffold_85600                    4704  4 +     18632 a-tgg----------
i Tolypeutes_matacus.TolMat_scaffold_85600               C 0 I 3
s Tonatia_saurophila.TonSau_scaffold_294                     83315 12 +    610378 t-agg-agat-tgat
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         15347 12 -     20410 T-AAG-AGAA-AAGT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      4472 12 -     12674 T-AAG-AGAA-AAGT
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       15455 12 +     19930 T-AAG-AGAA-AAGT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      11855 12 -     19997 T-AAG-AGAA-AAGT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            51998 12 -     60166 T-AAG-AGAA-AAGT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        19461 12 -     27529 T-AAG-AGAA-AAGT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                       1091 12 +      9229 T-AAG-AGAA-AAGT
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          12993 12 -     21137 T-AAG-AGAA-AAGT
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                    1093 12 +      9131 T-AAG-AGAA-AAGT
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                         1059 12 -      3730 T-AAG-AGAA-AAGT
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        29327 12 +     32220 T-AAG-AGAA-AAGT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5943424 12 +   6242583 T-AAG-AGAA-AAGT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       12676 12 +     20839 T-AAG-AGAA-AAGT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    2728  9 +     27266 A-TAG-AAAA-T---
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tupaia_chinensis.KB320699.1                              2159761 12 +   4065304 T-AGG-CCAA-AAGT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_306982                    1785 12 -      4186 T-AGG-CCAA-AAGT
i Tupaia_tana.TupTan_flattened_line_306982               C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15740586 12 +  33153633 a-tag-aaaa-tgag
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   55536 12 -     77625 t-agg-agaa-tggc
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Vicugna_pacos.KN270157.1                                 5374245 12 -   5488506 a-tag-aaag-tggt
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          3433 12 +    224448 t-aag-agaa-tggt
i Xerus_inauris.XerIna_scaffold_2302                     I 3 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      16970 12 +     63895 C-AGG-AGAA-TGGT
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 2 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_761354             886 12 -      1267 a-tag-aaaa-tgag
i Ziphius_cavirostris.ZipCav_flattened_line_761354       C 0 C 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 13401 23 -     43706 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4851709 23 -   5085361 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tapirus_terrestris.TapTer_scaffold_755                    389823 643 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      121344 643 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             32324 23 +     97271 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Pteronura_brasiliensis.PteBra_flattened_line_31117         41849 23 +     42204 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Otocyon_megalotis.JAEUCK010005147.1                       465291 23 -    559221 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Odobenus_rosmarus.KB229312.1                              507991 23 -   2017862 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9151867 23 -   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                20308849 23 +  31847680 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Mustela_putorius.JH418006.1                               303036 23 -  14710649 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         7256 23 -      8324 I
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184766 1004 -  29670104 I
e Mellivora_capensis.MelCap_flattened_line_69365             11647 23 +     13704 I
e Manis_pentadactyla.KN006162.1                              53022 987 -    317179 I
e Manis_javanica.JSZB01003497.1                              20877 990 +    737560 I
e Lycaon_pictus.CM007581.1                                17957935 23 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Leptonychotes_weddellii.KB714746.1                       3044388 23 +   3914936 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Jaculus_jaculus.JH725527.1                               8278673 121 -   9596543 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20664195 469 +  22651954 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               35993 651 +    498745 I
e Equus_caballus.CM000403.2                               18533964 651 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1286155 651 +   4378816 I
e Enhydra_lutris.KZ291758.1                               16330935 23 -  41312741 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    8624 649 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  675871 642 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5047 647 -     25243 I
e Canis_lupus_orion.HG994398.1                            18502997 23 +  63665305 I
e Canis_lupus_familiaris.chr16                            17961695 23 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9037226 23 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     2524 23 -     43241 I
e CanFam4.chr16                                           17801783 23 -  60362399 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Allactaga_bullata.AllBul_scaffold_9566                     75924 121 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             80986 23 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9511906 23 -  29979442 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      11222 19 +     62944 A-AGAT------CAATTAT-----GGTCTGT
s Acinonyx_jubatus.LLWD01001279.1                           829599 19 -   1699592 t-atat--caatta----t-----ggcccag
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 764
s Acomys_cahirinus.AcoCah_scaffold_12655                     73731 15 +     87051 A-ATAT-CA----T----T-----AG-CTAT
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 742
s Ailuropoda_melanoleuca.LNAT01000098.1                    9511929  6 -  29979442 -------------------------gccaat
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 23 I 1013
s Ailurus_fulgens.LNAC01001112.1                             81009  6 -    347723 -------------------------gccaat
i Ailurus_fulgens.LNAC01001112.1                         I 23 I 899
s Allenopithecus_nigroviridis.k141_3361533                   19057 19 -     52922 a-atat------caattat-----ggtctgt
i Allenopithecus_nigroviridis.k141_3361533               C 0 I 766
s Allochrocebus_lhoesti.k141_4309873                         18993 19 -     28001 a-atat------caattac-----ggtctgt
i Allochrocebus_lhoesti.k141_4309873                     C 0 I 761
s Allochrocebus_preussi.k141_1442296                          9488 19 -     18505 a-atat------caattat-----ggtctgt
i Allochrocebus_preussi.k141_1442296                     C 0 I 760
s Allochrocebus_solatus.k141_166128                          10341 19 -     12518 a-atat------caattat-----ggtctgt
i Allochrocebus_solatus.k141_166128                      C 0 I 765
s Alouatta_belzebul.k141_3560514                             10692 19 +     51355 A-ATAT------CAATTTT-----GGTCCAT
i Alouatta_belzebul.k141_3560514                         C 0 I 751
s Alouatta_caraya.k141_1701091                                3798 19 -     36483 A-ATAT------CAATTTT-----GGTCCAT
i Alouatta_caraya.k141_1701091                           C 0 I 756
s Alouatta_discolor.k141_566626                              14252 19 +     28687 A-ATAT------CAATTTT-----GGTCCAT
i Alouatta_discolor.k141_566626                          C 0 I 754
s Alouatta_juara.k141_1302312                                 2724 19 +     27940 A-ATAT------CAATTTT-----GGTCCAT
i Alouatta_juara.k141_1302312                            C 0 I 755
s Alouatta_macconnelli.k141_918386                            3812 19 -      9457 A-ATAT------CAATTTT-----GGTCCAT
i Alouatta_macconnelli.k141_918386                       C 0 I 755
s Alouatta_nigerrima.k141_1929159                             2770 19 +     30492 A-ATAT------CAATTTT-----GGTCCAT
i Alouatta_nigerrima.k141_1929159                        C 0 I 755
s Alouatta_palliata.k141_2135620                              6992 19 +     47717 A-ATAT------CAATTAT-----GGTCCAT
i Alouatta_palliata.k141_2135620                         C 0 I 754
s Alouatta_puruensis.k141_362188                              3492 19 +      5663 A-ATAT------CAATTTT-----GGTCCAT
i Alouatta_puruensis.k141_362188                         C 0 I 755
s Alouatta_seniculus.k141_117119                             17943 19 +     50774 A-ATAT------CAATTTT-----GGTCCAT
i Alouatta_seniculus.k141_117119                         C 0 I 755
s Ammotragus_lervia.NIVO01071767.1                          679741 18 -   2318259 --ttac-caA-GTC----T-----GGCCCAT
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 895
s Anoura_caudifer.AnoCau_scaffold_1412                      187480 19 +    412891 t-ttat--cagttt----g-----agcccag
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 706
s Antilocapra_americana.AntAmePen_scaffold_43303              1021 18 -     32520 --TTAT-CAA-GTA----T-----GGCCCAT
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 I 884
s Aplodontia_rufa.AprRuf_scaffold_68852                      14955 16 +     20879 A-ATAT--AAAGAA----T-----AAAT---
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 729
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  6890 19 +     43469 t-ttat--caattg----g-----agcccag
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 705
s Ateles_geoffroyi_b.tarseq_1536                             21211187 19 -  21539123 A-ATAT------CAATTAT-----GGTCCAT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 I 738
s Ateles_belzebuth.k141_445860                               45986 19 -     48001 A-ATAT------CAATTAT-----GGTCCAT
i Ateles_belzebuth.k141_445860                           C 0 I 738
s Ateles_chamek.k141_1806455                                 28787 19 -     30947 A-ATAT------CAATTAT-----GGTCCAT
i Ateles_chamek.k141_1806455                             C 0 I 738
s Ateles_geoffroyi_a.k141_833924                               10562 19 -     89868 A-ATAT------CAATTAT-----GGTCCAT
i Ateles_geoffroyi_a.k141_833924                           C 0 I 738
s Ateles_marginatus.k141_803263                              14944 19 -     40414 A-ATAT------CAATTAT-----GGTCCAT
i Ateles_marginatus.k141_803263                          C 0 I 738
s Ateles_paniscus.k141_457735                                22832 19 +     72325 A-ATAT------CAATTAT-----GGTCCAT
i Ateles_paniscus.k141_457735                            C 0 I 738
s Balaenoptera_acutorostrata.KI537508.1                   15194221 19 +  23207421 t-atat--caacta----t-----ggcccac
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 748
s Balaenoptera_bonaerensis.DF707048.1                         4686 19 -     18090 t-atat--caacta----t-----ggcccac
i Balaenoptera_bonaerensis.DF707048.1                    C 0 I 748
s Beatragus_hunteri.BeaHun_scaffold_50177                    30833 18 +     34529 --TTAC-CAA-GTC----T-----GGCCCAT
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 882
s Bison_bison.KN261452.1                                    203456 18 -    288883 --ttac-caA-GTA----T-----GGACCAT
i Bison_bison.KN261452.1                                 C 0 I 894
s Bos_indicus.CM003047.1                                  20276694 18 +  48749331 --ttac-caA-GTA----T-----GGCCCAT
i Bos_indicus.CM003047.1                                 C 0 I 893
s Bos_mutus.JH880303.1                                     1129248 18 -   1948126 --ttac-caA-GTA----T-----GGCCCAT
i Bos_mutus.JH880303.1                                   C 0 I 893
s Bos_taurus.CM000203.6                                   18087332 18 +  45695690 --ttac-caA-GTA----T-----GGCCCAT
i Bos_taurus.CM000203.6                                  C 0 I 893
s Bubalus_bubalis.KI419123.1                               2823285 18 +   4408762 --ttac-taA-GTC----T-----GGCCCAT
i Bubalus_bubalis.KI419123.1                             C 0 I 892
s Cacajao_ayresi.k141_552049                                103807 19 -    122966 A-ATAT------CAATTAT-----GGTCCAT
i Cacajao_ayresi.k141_552049                             C 0 I 767
s Cacajao_calvus.k141_5142                                   63310 19 +     81800 A-ATAT------CAATTAT-----GGTCCAT
i Cacajao_calvus.k141_5142                               C 0 I 767
s Cacajao_hosomi.k141_81245                                  32492 19 -     95584 A-ATAT------CAATTAT-----GGTCCAT
i Cacajao_hosomi.k141_81245                              C 0 I 767
s Cacajao_melanocephalus.k141_619699                         56593 19 -    119600 A-ATAT------CAATTAT-----GGTCCAT
i Cacajao_melanocephalus.k141_619699                     C 0 I 766
s Camelus_bactrianus.KN276810.1                           10004741 19 -  17673402 t-tcat--cagtta----c-----agcctat
i Camelus_bactrianus.KN276810.1                          C 0 I 47
s Camelus_dromedarius.KN272107.1                           2337213 19 -   7040546 t-tcat--cagtta----c-----agcctat
i Camelus_dromedarius.KN272107.1                         C 0 I 47
s Camelus_ferus.KB017975.1                                  405511 19 -   1652518 t-tcat--cagtta----c-----agcctat
i Camelus_ferus.KB017975.1                               C 0 I 47
s CanFam4.chr16                                           17801806  6 -  60362399 -------------------------gccaat
i CanFam4.chr16                                          I 23 I 829
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     2547  6 -     43241 -------------------------gccaat
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 23 I 834
s Canis_lupus_dingo.QKWQ01000480.1                         9037249  6 -   9314153 -------------------------gccaat
i Canis_lupus_dingo.QKWQ01000480.1                       I 23 I 827
s Canis_lupus_familiaris.chr16                            17961718  6 -  59632846 -------------------------gccaat
i Canis_lupus_familiaris.chr16                           I 23 I 834
s Canis_lupus_orion.HG994398.1                            18503020  6 +  63665305 -------------------------gccaat
i Canis_lupus_orion.HG994398.1                           I 23 I 829
s Capra_aegagrus.CM003241.1                               18833751 18 +  46296322 --ttac-caA-GTC----T-----GGCCCAT
i Capra_aegagrus.CM003241.1                              C 0 I 915
s Capra_hircus.CM004588.1                                 18064568 18 -  44709034 --ttac-caA-GTC----T-----GGCCCAT
i Capra_hircus.CM004588.1                                C 0 I 899
s Capromys_pilorides.CapPil_scaffold_65020                    3314 19 -     12242 A-ATAT-CA-GCTA----G-----AGCCCAC
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 59
s Carlito_syrichta.NW_007259797.1                           157831 19 -    496798 T-TCCT------AAATGCT-----TATCCAT
i Carlito_syrichta.NW_007259797.1                        C 0 I 752
s Carollia_perspicillata.CarPer_scaffold_92756                7231 19 -     11696 t-ttat--caattt----g-----agcccag
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 707
s Castor_canadensis.CasCan_scaffold_2074                    139806 19 +    179628 a-attc--caattt----t-----agcccat
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 320
s Catagonus_wagneri.CatWag_scaffold_2839                     96404 19 +    217609 t-atca--cagttg----t-----ggcccat
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 733
s Cavia_aperea.AVPZ01000300.1                             18351868 19 -  23392119 N-NNNN--NNNNNN----N-----NNNNNNN
i Cavia_aperea.AVPZ01000300.1                            C 0 I 62
s Cavia_porcellus.DS562891.1                              18364128 19 -  23407841 A-GTAG-CA-GCTA----T-----AGCCCAC
i Cavia_porcellus.DS562891.1                             C 0 I 62
s Cavia_tschudii.CavTsc_scaffold_8919                       103010 19 +    143979 A-GTAG-CA-GCTA----T-----AGCCCAC
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 I 62
s Cephalopachus_bancanus.k141_1423433                         7326 19 +     31688 T-TCCT------AAATGCT-----TATCCAT
i Cephalopachus_bancanus.k141_1423433                    C 0 I 1060
s Cercocebus_atys.KQ010504.1                               4480009 19 +   4669795 a-aTAT------CAATTAT-----GGTCTGt
i Cercocebus_atys.KQ010504.1                             C 0 I 762
s Cercocebus_chrysogaster.k141_1540778                        4508 19 +     17872 a-atat------caattat-----ggtctgt
i Cercocebus_chrysogaster.k141_1540778                   C 0 I 764
s Cercocebus_lunulatus.k141_3342297                           5098 19 -     14043 a-atat------caattat-----ggtctgt
i Cercocebus_lunulatus.k141_3342297                      C 0 I 762
s Cercocebus_torquatus.k141_3057011                          13196 19 +     27781 A-ATAT------CAATTAT-----GGTCTGT
i Cercocebus_torquatus.k141_3057011                      C 0 I 763
s Cercopithecus_ascanius.k141_1024104                        13357 19 -     20310 a-atat------caattat-----ggtctgt
i Cercopithecus_ascanius.k141_1024104                    C 0 I 762
s Cercopithecus_cephus.k141_1078548                          16329 19 +     29689 A-ATAT------CAATTAT-----GGTCTGT
i Cercopithecus_cephus.k141_1078548                      C 0 I 763
s Cercopithecus_diana.k141_1150327                           11089 19 -     20078 A-ATAT------CAATTAT-----GGTCTGT
i Cercopithecus_diana.k141_1150327                       C 0 I 762
s Cercopithecus_hamlyni.k141_187466                          19000 19 -     27936 A-GTAT------CAATTAT-----GGTCTGT
i Cercopithecus_hamlyni.k141_187466                      C 0 I 765
s Cercopithecus_lowei.k141_1854285                            7875 19 -     17152 A-ATAT------CAATTAT-----GGTCTGT
i Cercopithecus_lowei.k141_1854285                       C 0 I 763
s Cercopithecus_albogularis.ctg5                                38827601 19 +  39242232 A-ATAT------CAATTAT-----GGTCTGT
i Cercopithecus_albogularis.ctg5                               C 0 I 764
s Cercopithecus_mona.ctg39                                21227107 19 -  21565898 A-ATAT------CAATTAT-----GGTCTGT
i Cercopithecus_mona.ctg39                               C 0 I 763
s Cercopithecus_neglectus.k141_2526306                       44226 19 -     53127 a-atat------caattat-----ggtctgt
i Cercopithecus_neglectus.k141_2526306                   C 0 I 756
s Cercopithecus_nictitans.k141_1119862                        4478 19 +     13442 A-ATAT------CAATTAT-----GGTCTGT
i Cercopithecus_nictitans.k141_1119862                   C 0 I 765
s Cercopithecus_petaurista.k141_807961                       19022 19 -     27947 A-ATAT------CAATTAT-----GGTCTGT
i Cercopithecus_petaurista.k141_807961                   C 0 I 763
s Cercopithecus_pogonias.k141_2303387                         2049 19 +     10558 A-ATAT------CAATTAT-----GGTCTGT
i Cercopithecus_pogonias.k141_2303387                    C 0 I 764
s Cercopithecus_roloway.k141_2581234                          5054 19 +     14005 a-atat------caattat-----ggtctgt
i Cercopithecus_roloway.k141_2581234                     C 0 I 762
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            6638  6 -      8501 ------------cg----t-----ggc----
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       I 3 I 759
s Cheracebus_lucifer.k141_49986                               2413 19 -     17098 A-ATAT------CAATTAT-----GGTCCAT
i Cheracebus_lucifer.k141_49986                          C 0 I 81
s Cheracebus_lugens.k141_1393925                              2289 19 +     17877 A-ATAT------CAATTAT-----GGTCCAT
i Cheracebus_lugens.k141_1393925                         C 0 I 81
s Cheracebus_regulus.k141_471822                            159856 19 -    216457 A-ATAT------CAATTAT-----GGTCCAT
i Cheracebus_regulus.k141_471822                         C 0 I 81
s Cheracebus_torquatus.k141_1170026                          64325 19 +     76511 A-ATAT------CAATTAT-----GGTCCAT
i Cheracebus_torquatus.k141_1170026                      C 0 I 81
s Chinchilla_lanigera.JH722012.1                           1255592 15 +   2543920 a-atat--agaaaa----g-----aac----
i Chinchilla_lanigera.JH722012.1                         I 540 I 4808
s Chiropotes_israelita.k141_747660                          100936 19 +    146308 A-ATAT------CAATTAT-----GGTCCAT
i Chiropotes_israelita.k141_747660                       C 0 I 766
s Chiropotes_sagulatus.k141_1421488                          32743 19 -     50570 A-ATAT------CAATTAT-----GGTCCAT
i Chiropotes_sagulatus.k141_1421488                      C 0 I 766
s Chlorocebus_aethiops.ctg25                              18432924 19 -  18827391 a-atat------caattat-----ggtctgt
i Chlorocebus_aethiops.ctg25                             C 0 I 764
s Chlorocebus_pygerythrus.k141_1025673                       19421 19 -     50209 a-atat------caattat-----ggtctgt
i Chlorocebus_pygerythrus.k141_1025673                   C 0 I 763
s Chlorocebus_sabaeus.CM001947.1                         135426427 19 + 135778131 a-aTAT------CAATTAT-----GGTCTGT
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 763
s Colobus_angolensis.KN981557.1                            1914964 19 +   2368649 a-aTGT------CAATTAT-----GGTCTGT
i Colobus_angolensis.KN981557.1                          C 0 I 762
s Colobus_guereza.LG01                                   199953206 19 + 200372422 A-ATGT------CAATTAT-----GGTCTGT
i Colobus_guereza.LG01                                   C 0 I 761
s Colobus_polykomos.k141_906115                              41514 19 +     84244 A-ATGT------CAATTAT-----GGTCTGT
i Colobus_polykomos.k141_906115                          C 0 I 762
s Condylura_cristata.JH655891.1                           17551134 19 -  53390261 t-atat--taacta----t-----ggcccag
i Condylura_cristata.JH655891.1                          C 0 I 936
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           3118 12 +     23735 t-atat--gagtta----t------------
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 I 796
s Cricetomys_gambianus.CriGam_scaffold_18520                 52994 18 +     63868 a-atat--caactt----c-----ag-ctat
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 696
s Cricetulus_griseus.LT883664.1                           11668769 18 + 224834208 A-AAAT-CAA-CTT----T-----AG-CTAT
i Cricetulus_griseus.LT883664.1                          C 0 I 694
s Crocidura_indochinensis.CroInd_scaffold_37019               5051  5 -     19598 --------------------------TCCAC
i Crocidura_indochinensis.CroInd_scaffold_37019          I 2 I 1085
s Cryptoprocta_ferox.CryFer_flattened_line_16129             30777 19 -     87169 t-gtat--caatta----t-----ggcacag
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 779
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  38243 19 +     51376 A-ATAT-GA-GCTA----G-----AGCCCAC
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 54
s Dasyprocta_punctata.DasPun_flattened_line_15900             2070 19 -     75252 A-ATAT-CAGT-TA----T-----AGCCCAC
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 64
s Dasypus_novemcinctus.JH564415.1                            69662 10 +   2246927 ------------ca----t-----ggcccat
i Dasypus_novemcinctus.JH564415.1                        I 3 I 726
s Delphinapterus_leucas.KZ290073.1                        16814104 19 +  35494412 t-atat--caatta----t-----ggcccac
i Delphinapterus_leucas.KZ290073.1                       C 0 I 740
s Desmodus_rotundus.KZ672289.1                             8632235 19 +  20541912 t-ttat--cagttt----g-----agcccag
i Desmodus_rotundus.KZ672289.1                           C 0 I 708
s Dinomys_branickii.DinBra_scaffold_21862                    39043 14 +     67921 a-atat---ggaaa----g-----aac----
i Dinomys_branickii.DinBra_scaffold_21862                I 511 I 4687
s Dolichotis_patagonum.DolPat_scaffold_30833                 35588 19 -     42551 A-GTGT--AAGTTA----G-----AGCCCAC
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 I 61
s Eidolon_helvum.AWHC01278734.1                                909 19 +      2334 c-atat--caatta----t-----agcccat
i Eidolon_helvum.AWHC01278734.1                          C 0 N 0
s Elaphurus_davidianus.JRFZ01104969.1                       314223 18 +    607251 --ttac-CAA-GTA----T-----GGCCCAT
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 892
s Ellobius_lutescens.LOEQ01008920.1                          23522 18 -    110024 A-ATAT-CAA-CTT----T-----AG-CTAG
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 1281
s Ellobius_talpinus.LOJH01081419.1                            3432 18 +      8657 A-ATAT-CAA-CTT----T-----AG-CTAT
i Ellobius_talpinus.LOJH01081419.1                       C 0 I 1302
s Enhydra_lutris.KZ291758.1                               16330958  6 -  41312741 -------------------------gccaat
i Enhydra_lutris.KZ291758.1                              I 23 I 7978
s Eptesicus_fuscus.JH977646.1                              2149368 19 -  14770903 c-agat--caattt----t-----ggcccat
i Eptesicus_fuscus.JH977646.1                            C 0 I 1178
s Erythrocebus_patas.Contig38                             21209598 19 -  21539334 A-ATAT------CAATTAT-----GGTCTGT
i Erythrocebus_patas.Contig38                            C 0 I 762
s Eschrichtius_robustus.EscRob_flattened_line_8968           13532 19 +    133382 t-atat--caacta----t-----ggcccac
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 739
s Eubalaena_japonica.EubJap_flattened_line_31514             27479 19 -     44125 t-atat--caatta----t-----ggcccac
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 I 741
s Felis_catus.CM001381.2                                  20239343 19 + 206538554 t-atat--caatta----t-----ggcccag
i Felis_catus.CM001381.2                                 C 0 I 794
s Felis_catus_fca126.CM031415.1                           20198218 19 + 205367284 t-atat--caatta----t-----ggcccag
i Felis_catus_fca126.CM031415.1                          C 0 I 791
s Felis_nigripes.FelNig_flattened_line_20823                 11878 19 -     36744 t-atat--caatta----t-----ggcccag
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 791
s Fukomys_damarensis.KN121974.1                             852664 19 +   3816255 A-ATAT-CAA-CTG----T-----AGCCCAc
i Fukomys_damarensis.KN121974.1                          C 0 I 59
s Galeopterus_variegatus.GalVar_scaffold_108840               4939 15 -      9135 a-atat------ta----t-----agcccat
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 I 812
s Giraffa_tippelskirchi.LVKQ01S007888.1                     611458 18 -    660261 --tgat--cgagta----T-----GGCCCAT
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 I 901
s Glis_glis.GliGli_scaffold_19807                            34487 19 +     49224 A-ATATTCA-T-TA----T-----AGGCCAT
i Glis_glis.GliGli_scaffold_19807                        C 0 I 750
s Gorilla_beringei.k141_2066350                                612 19 +      1742 A-AGAT------CAATTAT-----GGTCTGT
i Gorilla_beringei.k141_2066350                          I 134 I 21
s Gorilla_gorilla.CYUI03001204.1                             18040 19 -     63219 a-AGAT------CAATTAT-----GGTCTGT
i Gorilla_gorilla.CYUI03001204.1                         I 134 I 21
s Graphiurus_murinus.GraMur_scaffold_10447                   36331 19 +     78134 A-ATAT-TAAT-TG----T-----AGGCCAG
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 762
s Helogale_parvula.HelPar_flattened_line_2585               244586 19 +    327341 T-GTAT-CAAT-TA----T-----GGCGTAG
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 786
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 22056 18 +     36099 --tTAC-CAA-GTC----T-----GGCCCAT
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 I 899
s Hippopotamus_amphibius.HipAmp_scaffold_9076               112963 18 +    128679 t-atat---catta----t-----ggcccat
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 I 741
s Hipposideros_armiger.JXIK01000431.1                       112700 19 +   1711038 t-acat--caatta----t-----agcccat
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 802
s Hipposideros_galeritus.HipGal_scaffold_101188               1272 19 +      9903 t-acat--caactg----t-----agcccat
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 I 796
s Hoolock_leuconedys.ctg274                                    439269 19 +    630532 A-ATAT------CAATTAT-----GGTCTGC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  47325 19 +     55795 T-ATAT-CAAT-TA----T-----GGCCCAG
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 1018
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23844 13 -    143317 A-G-------T-TA----T-----AGCCCAA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 3205
s Hystrix_cristata.HysCri_scaffold_5660                      85146 19 +    135385 A-ATAT-CA-GCTA----T-----AGCCCAC
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 66
s Ictidomys_tridecemlineatus.JH393364.1                    7523218 19 -   7955117 a-acgt--caagta----c-----agatcca
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 2024
s Inia_geoffrensis.IniGeo_flattened_line_34779                1310 19 -     31341 t-atat--caatta----t-----ggcccac
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 I 741
s Kogia_breviceps.KogBre_flattened_line_81059                 1056 19 -     18011 t-atat--caatta----t-----gtcccac
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 I 734
s Lagothrix_lagothricha.k141_1005387                         16989 19 -     38430 A-ATAT------CAATTAT-----GGTCCAT
i Lagothrix_lagothricha.k141_1005387                     C 0 I 754
s Lasiurus_borealis.LasBor_scaffold_50988                    17852 19 +     29960 c-agat--caactg----t-----gacccat
i Lasiurus_borealis.LasBor_scaffold_50988                I 202 I 1185
s Leptonychotes_weddellii.KB714746.1                       3044411  6 +   3914936 -------------------------gccaat
i Leptonychotes_weddellii.KB714746.1                     I 23 I 787
s Lepus_americanus.LepAme_scaffold_107385                     5101 18 +     14121 A-ATAG-CAAT-TA----T-----GAGCCA-
i Lepus_americanus.LepAme_scaffold_107385                C 0 n 0
s Lipotes_vexillifer.KE559953.1                             270365 19 -    662738 t-atat--caatta----t-----ggcccac
i Lipotes_vexillifer.KE559953.1                          C 0 I 958
s Lophocebus_aterrimus.ctg367                              1441556 19 +   1826925 a-atat------caattat-----ggtctgt
i Lophocebus_aterrimus.ctg367                            C 0 I 764
s Lycaon_pictus.CM007581.1                                17957958  6 -  59628241 -------------------------gccaat
i Lycaon_pictus.CM007581.1                               I 23 I 834
s Macaca_arctoides.k141_2326796                              11366 19 +     40492 a-atat------caattat-----ggtctgt
i Macaca_arctoides.k141_2326796                          C 0 I 765
s Macaca_assamensis.Contig5                               59680620 19 +  60120075 A-ATAT------CAATTAT-----GGTCTGT
i Macaca_assamensis.Contig5                              C 0 I 761
s Macaca_cyclopis.k119_18836                                 17137 19 -     26193 a-atat------caattat-----ggtctgt
i Macaca_cyclopis.k119_18836                             C 0 I 790
s Macaca_fascicularis.k141_814140                            84915 19 -    114318 a-atat------caattat-----ggtctgt
i Macaca_fascicularis.k141_814140                        C 0 I 787
s Macaca_fuscata.k119_255327                                 10604 19 -     23192 a-atac------caattat-----ggtctgt
i Macaca_fuscata.k119_255327                             C 0 I 789
s Macaca_leonina.k141_3550399                                20070 19 -     29190 a-atat------caattat-----ggtctgt
i Macaca_leonina.k141_3550399                            C 0 I 788
s Macaca_maura.k141_2733130                                  28648 19 +     37952 a-atat------caattat-----ggtctgt
i Macaca_maura.k141_2733130                              C 0 I 789
s Macaca_mulatta.NC_041758.1                             186843723 19 + 187317192 a-aTAT------CAATTAT-----GGTCTGT
i Macaca_mulatta.NC_041758.1                             C 0 I 787
s Macaca_nemestrina.KQ007038.1                            25462303 19 -  25927173 a-aTAT------CAATTAT-----GGTCTGt
i Macaca_nemestrina.KQ007038.1                           C 0 I 788
s Macaca_nigra.k141_1655396                                  84506 19 +     89720 a-atat------caattat-----ggtctgt
i Macaca_nigra.k141_1655396                              C 0 I 789
s Macaca_radiata.k141_3680011                                11495 19 +     20474 A-ATAT------CAATTAT-----GGTCTGT
i Macaca_radiata.k141_3680011                            C 0 I 812
s Macaca_siberu.k141_635500                                  11294 19 -     14993 a-atat------caattat-----ggtctgt
i Macaca_siberu.k141_635500                              C 0 I 787
s Macaca_silenus.Contig273                                  334156 19 -    668171 a-atat------caattat-----ggtctgt
i Macaca_silenus.Contig273                               C 0 I 788
s Macaca_thibetana.k99_256239                                 9604 19 -     24072 a-atat------caattat-----ggtctgt
i Macaca_thibetana.k99_256239                            C 0 I 767
s Macaca_tonkeana.k141_1498238                               30237 19 -     45290 a-atat------caattat-----ggtctgt
i Macaca_tonkeana.k141_1498238                           C 0 I 765
s Macroglossus_sobrinus.MacSob_scaffold_8222                 93031 19 +     94391 t-atat--caatta----t-----agcccat
i Macroglossus_sobrinus.MacSob_scaffold_8222             C 0 N 0
s Mandrillus_leucophaeus.scaffold280                      23941823 19 -  24302211 a-atat------caattat-----ggtctgt
i Mandrillus_leucophaeus.scaffold280                     C 0 I 770
s Mandrillus_sphinx.Contig270                               355938 19 +    752769 a-atat------caattat-----ggtctgt
i Mandrillus_sphinx.Contig270                            C 0 I 763
s Marmota_marmota.CZRN01000018.1                          33105562 19 -  40650429 a-acgt--caagta----c-----agatcca
i Marmota_marmota.CZRN01000018.1                         C 0 I 763
s Megaderma_lyra.MegLyr_scaffold_4542                        15558 24 -    207569 t-atat--cagtta----tggctcagctcac
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 786
s Mellivora_capensis.MelCap_flattened_line_69365             11670  6 +     13704 -------------------------gccaat
i Mellivora_capensis.MelCap_flattened_line_69365         I 23 I 1030
s Meriones_unguiculatus.MerUng_scaffold_7390                 35770 18 +    140813 A-ATAT-CAA-CTT----T-----AG-TTAT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 720
s Mesoplodon_bidens.MesBid_scaffold_108144                    5743 19 +     10310 t-atat--caatta----t-----ggcccac
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 I 740
s Micronycteris_hirsuta.MicHir_scaffold_52381                17981 19 -     19307 t-ttat--cagttt----g-----agcccag
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 920
s Miniopterus_natalensis.LDJU01000034.1                    1852573  5 +   8254450 t-ttat-------------------------
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 979
s Miniopterus_schreibersii.MinSch_scaffold_18080             36257  5 +     64694 t-ttat-------------------------
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 979
s Miopithecus_ogouensis.k141_534055                          13504 19 -     28506 A-ATAT------CAATTAT-----GGTCTGT
i Miopithecus_ogouensis.k141_534055                      C 0 I 764
s Mirounga_angustirostris.MirAng_flattened_line_93702         7279  6 -      8324 -------------------------gccaat
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 23 I 787
s Monodon_monoceros.MonMon_M_scaffold_103                    29489 19 -    437263 t-atat--caatta----t-----ggcccac
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 739
s Mormoops_blainvillei.MorMeg_scaffold_1417                 143567 19 -    366855 t-ttat--caattt----t-----agcccat
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 690
s Moschus_moschiferus.MosMos_scaffold_13123                   3504 18 +     82753 --ttac--caagta----t-----ggcccat
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 1037
s Mungos_mungo.MunMun_flattened_line_23663                   36513 20 +     37127 T-GTAT-CAATTTA----T-----GGCATAG
i Mungos_mungo.MunMun_flattened_line_23663               C 0 N 0
s Murina_feae.MurFea_scaffold_85699                           9324 19 +     14753 c-atat--cgattt----t-----ggcccat
i Murina_feae.MurFea_scaffold_85699                      C 0 I 1173
s Mus_caroli.LT608237.1                                   84364125 18 - 120012414 a-atat--caacct----t-----AG-CCAT
i Mus_caroli.LT608237.1                                  C 0 I 854
s Mus_musculus.chr8                                       87653630 18 - 129401213 a-atat--caacct----t-----AG-CCAT
i Mus_musculus.chr8                                      C 0 I 753
s Mus_pahari.LT608297.1                                   31358352 18 -  89631738 a-atat--caacct----t-----AG-CCat
i Mus_pahari.LT608297.1                                  C 0 I 734
s Mus_spretus.CM004101.1                                  90756120 17 - 130317789 a-atat--caacct----t-----GG-CTA-
i Mus_spretus.CM004101.1                                 C 0 I 1051
s Muscardinus_avellanarius.MusAve_scaffold_82313              7962 19 +     14296 T-ATCT-TAA-ATA----T-----GGATCAT
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 758
s Mustela_putorius.JH418006.1                               303059  6 -  14710649 -------------------------gccaat
i Mustela_putorius.JH418006.1                            I 23 I 955
s Myocastor_coypus.MyoCoy_scaffold_10123                     73496 18 -     80779 A-ATA--CA-GCTA----G-----AGCCCAC
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 I 58
s Myotis_brandtii.KE162005.1                                283072 19 -  10118263 c-atat--caattt----t-----ggcccat
i Myotis_brandtii.KE162005.1                             C 0 I 1168
s Myotis_davidii.KB100139.1                                1590390 19 -   6019432 c-atat--caattt----t-----ggcccat
i Myotis_davidii.KB100139.1                              C 0 I 1178
s Myotis_lucifugus.GL429869.1                              3906502 19 -   4330536 c-atat--caattt----t-----ggcccat
i Myotis_lucifugus.GL429869.1                            C 0 I 1165
s Myotis_myotis.MyoMyo_scaffold_44643                          804 19 +     25416 c-atat--caattt----t-----ggcccat
i Myotis_myotis.MyoMyo_scaffold_44643                    C 0 I 1198
s Nannospalax_galili.KL204047.1                            2039212 18 -   3037898 A-ATAT-CAA-CTT----T-----AG-TAAT
i Nannospalax_galili.KL204047.1                          C 0 I 735
s Nasalis_larvatus.k141_413338                               19559 19 +     21681 a-atat------caattat-----ggtctct
i Nasalis_larvatus.k141_413338                           C 0 I 774
s Neomonachus_schauinslandi.NINY01007730.1                20308872  6 +  31847680 -------------------------gccaat
i Neomonachus_schauinslandi.NINY01007730.1               I 23 I 782
s Neophocaena_asiaeorientalis.KZ687982.1                   5868452 19 +   7148211 t-atat--caatta----t-----ggcccac
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 741
s Noctilio_leporinus.NocLep_scaffold_251                    759757 19 +    783361 T-TTAT-CAAT-TT----T-----AGTCCAT
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 720
s Nyctereutes_procyonoides.CAJHUB010000658.1               9151890  6 -   9404916 -------------------------gccaat
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 23 I 819
s Ochotona_princeps.JH802162.1                             1367250 19 +   3988456 A-ACAG-TAAT-TA----T-----GAACCAT
i Ochotona_princeps.JH802162.1                           C 0 I 696
s Odobenus_rosmarus.KB229312.1                              508014  6 -   2017862 -------------------------gccaat
i Odobenus_rosmarus.KB229312.1                           I 23 I 786
s Odocoileus_virginianus.KZ100018.1                         147025 18 +    630418 --ttac-CAA-GTA----T-----GGGCCAT
i Odocoileus_virginianus.KZ100018.1                      C 0 I 896
s Okapia_johnstoni.LVCL01S0005463.1                          81138 18 -    150152 --ttat--caagta----T-----GGCCCAA
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 1167
s Ondatra_zibethicus.OndZib_scaffold_7387                      614 18 +    140218 A-ATAT-CAA-GTT----T-----AG-CTAT
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 3336
s Onychomys_torridus.OnyTor_scaffold_2986                    83542 18 +    102263 A-ATAT-CAA-CTT----G-----AG-CTAC
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 721
s Orcinus_orca.KB316932.1                                  2784345 19 -  10937097 t-atat--caatta----t-----ggcccac
i Orcinus_orca.KB316932.1                                C 0 I 739
s Oryctolagus_cuniculus.CM000791.1                       107181382 18 - 174332312 A-ATAG-CAAT-TA----T-----GAGCCA-
i Oryctolagus_cuniculus.CM000791.1                       C 0 n 0
s Otocyon_megalotis.JAEUCK010005147.1                       465314  6 -    559221 -------------------------gccaat
i Otocyon_megalotis.JAEUCK010005147.1                    I 23 I 822
s Ovis_aries.CM001607.2                                   17589807 18 +  44047080 --ttac-caA-GTC----T-----GGCCCAT
i Ovis_aries.CM001607.2                                  C 0 I 947
s Ovis_canadensis.OviCan_scaffold_2572                      178009 18 -    191736 --TTAC-CAA-GTC----T-----GGCCCAT
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 I 896
s Pan_paniscus.KQ411613.1                                    48570 19 +     80009 a-aGAT------CAATTAT-----GGTCTGT
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189147437 19 + 189151597 a-aGAT------CAATTAT-----GGTCTGT
i Pan_troglodytes.CM009242.2                             I 12 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  153414 20 +    230217 taatat--caatta----t-----ggcccag
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 779
s Panthera_pardus.KV860321.1                                266725 20 +  18783137 taatat--caatta----t-----ggcccag
i Panthera_pardus.KV860321.1                             C 0 I 784
s Panthera_tigris.KE722367.1                               4723550 20 -   8748460 taatat--caatta----t-----ggcccag
i Panthera_tigris.KE722367.1                             C 0 I 779
s Pantholops_hodgsonii.KE114653.1                          1268743 18 -   2937107 --ttac-caA-GTC----T-----GGCCCAT
i Pantholops_hodgsonii.KE114653.1                        C 0 I 892
s Papio_anubis.CM001495.2                                183447629 19 + 183742232 a-aTAT------CAATTAT-----GGTCTGT
i Papio_anubis.CM001495.2                                C 0 I 863
s Papio_cynocephalus.k141_4307930                            11279 19 +     20448 A-ATAT------CAATTAT-----GGTCTGT
i Papio_cynocephalus.k141_4307930                        C 0 I 761
s Papio_hamadryas.Contig39                                20568087 19 +  20919399 a-atat------caattat-----ggtctgt
i Papio_hamadryas.Contig39                               C 0 I 764
s Papio_kindae.k141_1936966                                  10033 19 +     41871 A-ATAT------CAATTAT-----GGTCTGT
i Papio_kindae.k141_1936966                              C 0 I 764
s Papio_papio.k141_802527                                    13312 19 +     27711 a-atat------caattat-----ggtctgt
i Papio_papio.k141_802527                                C 0 I 763
s Papio_ursinus.k141_5274964                                  4311 19 -     11374 a-atat------caattat-----ggtctgt
i Papio_ursinus.k141_5274964                             C 0 I 763
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14838 19 -     78924 t-atat--caatta----t-----ggcccag
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 778
s Peromyscus_maniculatus.KI615324.1                       18214278 18 -  18517816 A-ATAT-CAA-CTT----G-----AG-CTAt
i Peromyscus_maniculatus.KI615324.1                      C 0 I 731
s Petromus_typicus.PetTyp_scaffold_221660                      934 19 -      2102 A-ATAT-CA-GCTA----C-----AGTCCAT
i Petromus_typicus.PetTyp_scaffold_221660                C 0 I 68
s Phocoena_phocoena.PhoPho_flattened_line_24159              11414 19 +     63832 t-atat--caatta----t-----ggcccac
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 741
s Piliocolobus_badius.k141_1142974                            2671 19 +     68526 A-ATGT------GAATTAT-----GGTCTGT
i Piliocolobus_badius.k141_1142974                       C 0 I 765
s Piliocolobus_gordonorum.k141_381342                        42808 19 +     89929 a-atgt------gaattat-----ggtctgt
i Piliocolobus_gordonorum.k141_381342                    C 0 I 766
s Piliocolobus_kirkii.k141_448987                            44224 19 +     51399 a-atgt------gaattat-----ggtctgt
i Piliocolobus_kirkii.k141_448987                        C 0 I 766
s Piliocolobus_tephrosceles.PDMG02000141.1                14300460 19 -  14605196 a-aTGT------GAATTAT-----GGTCTGT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 766
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             4141 19 +     22620 C-AGAT-CAAT-TT----T-----GGCCCAT
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 1185
s Pithecia_albicans.k141_1476471                              6207 19 +     26961 A-ATAT------CAATTAT-----GGTCCAT
i Pithecia_albicans.k141_1476471                         C 0 I 767
s Pithecia_chrysocephala.k141_839575                          2335 19 +     23417 A-GTAT------CAATTAT-----GGTCCAT
i Pithecia_chrysocephala.k141_839575                     C 0 I 766
s Pithecia_hirsuta.k141_305604                                6199 19 +     29694 A-ATAT------CAATTAT-----GGTCCAT
i Pithecia_hirsuta.k141_305604                           C 0 I 767
s Pithecia_mittermeieri.k141_446740                          31225 19 +     52772 A-ATAT------CAATTAT-----GGTCCAT
i Pithecia_mittermeieri.k141_446740                      C 0 I 767
s Pithecia_pissinattii.k141_1824269                           6221 19 +     26198 A-ATAT------CAATTAT-----GGTCCAT
i Pithecia_pissinattii.k141_1824269                      C 0 I 767
s Pithecia_pithecia.tarseq_165                             3942752 19 +   4542175 A-ATAT------CAATTAT-----GGTCCAT
i Pithecia_pithecia.tarseq_165                           C 0 I 766
s Pithecia_vanzolinii.k141_1697688                            6185 19 -     23490 A-ATAT------CAATTAT-----GGTCCAT
i Pithecia_vanzolinii.k141_1697688                       C 0 I 767
s Platanista_gangetica.PlaMin_flattened_line_173610            720 19 +      7680 t-atat--caatta----t-----ggcccac
i Platanista_gangetica.PlaMin_flattened_line_173610      C 0 I 975
s Plecturocebus_bernhardi.k141_2549090                       10445 19 -     39866 A-ATAT------CAATTAT-----GGTCCAT
i Plecturocebus_bernhardi.k141_2549090                   C 0 I 770
s Plecturocebus_brunneus.k141_1495506                        19609 19 +     34906 A-ATAT------CAATTAT-----GGTCCAT
i Plecturocebus_brunneus.k141_1495506                    C 0 I 769
s Plecturocebus_caligatus.k141_1382851                       23871 19 +     87950 A-ATAT------CAATTAT-----GGTCCAT
i Plecturocebus_caligatus.k141_1382851                   C 0 I 769
s Plecturocebus_cinerascens.k141_1164729                     24700 19 +     88961 A-ATAT------CAATTAT-----GGTCCAT
i Plecturocebus_cinerascens.k141_1164729                 C 0 I 767
s Plecturocebus_cupreus.k141_2351393                         10368 19 +     39403 A-ATAT------CAATTAT-----GGTCCAT
i Plecturocebus_cupreus.k141_2351393                     C 0 I 769
s Plecturocebus_dubius.k141_1058799                          24151 19 -     87928 A-ATAT------CAATTAT-----GGTCCAT
i Plecturocebus_dubius.k141_1058799                      C 0 I 769
s Plecturocebus_grovesi.k141_2013005                         31112 19 +     60166 A-ATAT------CAATTAT-----GGTCCAT
i Plecturocebus_grovesi.k141_2013005                     C 0 I 770
s Plecturocebus_hoffmannsi.k141_3303950                      31308 19 +     67232 A-ATAT------CAATTAT-----GGTCCAT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 I 770
s Plecturocebus_miltoni.k141_349282                          26781 19 +     90634 A-ATAT------CAATTAT-----GGTCCAT
i Plecturocebus_miltoni.k141_349282                      C 0 I 770
s Plecturocebus_moloch.k141_1031110                          24154 19 -     89403 A-ATAT------CAATTAT-----GGTCCAT
i Plecturocebus_moloch.k141_1031110                      C 0 I 770
s Pongo_abelii.CM009266.2                                189135588 19 + 189387572 a-aGAT------CAATTAT-----GGTCTGT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9575198 19 +   9816681 A-AGAT------CAATTAT-----GGTCTGT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               77740 19 -     81375 A-ATAT------CAATTAT-----GTTCTGT
i Presbytis_comata.k141_677006                           C 0 I 774
s Presbytis_mitrata.k141_1087752                              9571 19 +     19060 A-ATAT------CAATTAT-----GTTCTGT
i Presbytis_mitrata.k141_1087752                         C 0 I 779
s Psammomys_obesus.NESX01036370.1                            13405 18 -     21651 A-ATAT-CAA-CTT----T-----AG-TTAT
i Psammomys_obesus.NESX01036370.1                        C 0 I 722
s Pteronotus_parnellii.KE909381.1                            17050 19 -     21811 t-ttat--caattt----t-----agcccat
i Pteronotus_parnellii.KE909381.1                        C 0 I 734
s Pteronura_brasiliensis.PteBra_flattened_line_31117         41872  6 +     42204 -------------------------GCCAAT
i Pteronura_brasiliensis.PteBra_flattened_line_31117     I 23 N 0
s Pteropus_alecto.KB030862.1                              22979117 16 +  28871421 t-atat--caatta----t-----agcc---
i Pteropus_alecto.KB030862.1                             C 0 I 8079
s Pteropus_vampyrus.KN525825.1                             1362102 16 +   4952924 t-atat--caatta----t-----agcc---
i Pteropus_vampyrus.KN525825.1                           C 0 I 8654
s Puma_concolor.QAVW01001104.1                            20276613 19 -  38429054 t-atat--caatta----t-----ggcccag
i Puma_concolor.QAVW01001104.1                           C 0 I 784
s Pygathrix_cinerea.k141_1153803                             19551 19 -     91421 a-atat------caattat-----ggtctgt
i Pygathrix_cinerea.k141_1153803                         C 0 I 776
s Pygathrix_nigripes_b.ctg100                                 7613678 19 +   7812017 A-ATAT------CAATTAT-----GGTCTGT
i Pygathrix_nigripes_b.ctg100                               C 0 I 774
s Pygathrix_nigripes_a.k141_215492                             19583 19 -     72585 a-atat------caattat-----ggtctgt
i Pygathrix_nigripes_a.k141_215492                         C 0 I 774
s Rangifer_tarandus.RanTarSib_scaffold_29737                  8860 18 +     55207 --tTAC-CAA-GTA----T-----GGCCCAT
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 899
s Rattus_norvegicus.chr16                                 53573722 18 +  90668790 a-atat--caatct----T-----AG-CTAT
i Rattus_norvegicus.chr16                                C 0 I 692
s Rhinolophus_sinicus.LVEH01000134.1                        369165 19 -   3329780 t-atat--caatta----t-----ggcccat
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 800
s Rhinopithecus_bieti.k119_1041714                             145 19 +      5697 a-atat------caattat-----ggtctgt
i Rhinopithecus_bieti.k119_1041714                       C 0 I 775
s Rhinopithecus_roxellana.NC_044550.1                     91240619 19 - 195417433 a-aTAT------CAATTAT-----GGTCTGT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 774
s Rhinopithecus_strykeri.ctg102                            7676266 19 +   7961872 a-atat------caattat-----ggtctgt
i Rhinopithecus_strykeri.ctg102                          C 0 I 775
s Rousettus_aegyptiacus.RouAeg_scaffold_11038                90190 19 -     96226 T-ATAT-CAAT-TT----T-----AGCCCAT
i Rousettus_aegyptiacus.RouAeg_scaffold_11038            C 0 N 0
s Saiga_tatarica.SaiTat_scaffold_133311                       1344 18 +      9503 --ttac--caagca----t-----ggcccat
i Saiga_tatarica.SaiTat_scaffold_133311                  C 0 I 867
s Scalopus_aquaticus.ScaAqu_scaffold_662                    155456 19 -    313613 t-atat--aagcta----t-----ggctcag
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 639
s Semnopithecus_entellus.k141_1672505                         4421 19 -     12572 A-ATAT------CAATTAT-----GGTCTGT
i Semnopithecus_entellus.k141_1672505                    C 0 I 765
s Semnopithecus_hypoleucos.k141_1615806                      31273 19 +     39453 A-ATAT------CAATTAT-----GGTCTGT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 I 766
s Semnopithecus_johnii.k141_670120                           11777 19 +     27826 A-ATAT------CAATTAT-----GGTCTGT
i Semnopithecus_johnii.k141_670120                       C 0 I 766
s Semnopithecus_priam.k141_638794                            11322 19 -     19483 A-ATAT------CAATTAT-----GGTCTGT
i Semnopithecus_priam.k141_638794                        C 0 I 767
s Semnopithecus_schistaceus.k141_1572284                      4620 19 -     12762 A-ATAT------CAATTAT-----GGTCTGT
i Semnopithecus_schistaceus.k141_1572284                 C 0 I 765
s Semnopithecus_vetulus.k141_910252                           4463 19 +     13763 A-ATAT------CAATTAT-----GGTCTGT
i Semnopithecus_vetulus.k141_910252                      C 0 I 765
s Sigmodon_hispidus.SigHis_scaffold_42075                     3310 18 -     30804 A-ATAT-CTA-CTT----T-----AG-CTGT
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 I 781
s Sorex_araneus.JH798187.1                                13653295 19 -  18376816 T-ATAT-CAAT-AA----T-----ACCCCAC
i Sorex_araneus.JH798187.1                               I 1 I 9235
s Spermophilus_dauricus.KZ294078.1                         1956371 19 -   3870691 a-acgt--caagta----c-----agatcca
i Spermophilus_dauricus.KZ294078.1                       C 0 I 755
s Spilogale_gracilis.SpiGra_flattened_line_13525             32347  6 +     97271 -------------------------gccaat
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 23 I 779
s Suricata_suricatta.SurSur_flattened_line_6629              20846 19 -    196729 T-GTAT-CAGT-TA----T-----GGTGTAG
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 794
s Sus_scrofa.CM000828.4                                    6813989 19 +  69701581 t-atca--cagtta----t-----ggcccat
i Sus_scrofa.CM000828.4                                  C 0 I 745
s Tadarida_brasiliensis.TadBra_scaffold_25820                13520 19 +     41958 t-atat--caatgt----t-----ggcccat
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 800
s Tarsius_lariang.k141_2201908                               28325 19 +     70052 T-TCCT------AAATGCT-----TATCCAT
i Tarsius_lariang.k141_2201908                           C 0 I 754
s Tarsius_wallacei.k141_254427                                3122 19 -     16117 T-TCCT------AAATGCT-----TATCCAT
i Tarsius_wallacei.k141_254427                           C 0 I 753
s Theropithecus_gelada.CM009954.1                        186432937 19 + 186847797 a-aTAT------CAATTAT-----GGTCTGT
i Theropithecus_gelada.CM009954.1                        C 0 I 765
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              107604 19 +    114563 A-ATAT-CA-GCTA----T-----GGCCCAT
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 218
s Tolypeutes_matacus.TolMat_scaffold_85600                    4711 10 +     18632 ------------ca----t-----ggcccac
i Tolypeutes_matacus.TolMat_scaffold_85600               I 3 I 768
s Tonatia_saurophila.TonSau_scaffold_294                     83327 19 +    610378 t-ttat--cagttt----g-----agcccag
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 714
s Trachypithecus_auratus.k141_722599                         15359 19 -     20410 A-ATAT------CAATTAT-----GGTCTGT
i Trachypithecus_auratus.k141_722599                     C 0 I 766
s Trachypithecus_crepusculus.k141_582567                      4484 19 -     12674 A-ATAT------CAATTAT-----GGTCTGT
i Trachypithecus_crepusculus.k141_582567                 C 0 I 761
s Trachypithecus_cristatus.k141_580354                       15467 19 +     19930 A-ATAT------CAATTAT-----GGTCTGT
i Trachypithecus_cristatus.k141_580354                   C 0 I 766
s Trachypithecus_francoisi.k141_1412647                      11867 19 -     19997 A-ATAT------CAATTAT-----GGTCTGT
i Trachypithecus_francoisi.k141_1412647                  C 0 I 766
s Trachypithecus_geei.k141_277701                            52010 19 -     60166 A-ATAT------CAATTAT-----GGTCTGT
i Trachypithecus_geei.k141_277701                        C 0 I 766
s Trachypithecus_germaini.k141_912491                        19473 19 -     27529 A-ATAT------CAATTAT-----GGTCTGT
i Trachypithecus_germaini.k141_912491                    C 0 I 766
s Trachypithecus_hatinhensis.k141_17719                       1103 19 +      9229 A-ATAT------CAATTAT-----GGTCTGT
i Trachypithecus_hatinhensis.k141_17719                  C 0 I 764
s Trachypithecus_laotum.k141_907409                          13005 19 -     21137 A-ATAT------CAATTAT-----GGTCTGT
i Trachypithecus_laotum.k141_907409                      C 0 I 761
s Trachypithecus_leucocephalus.k141_101510                    1105 19 +      9131 A-ATAT------CAATTAT-----GGTCTGT
i Trachypithecus_leucocephalus.k141_101510               C 0 I 766
s Trachypithecus_melamera.k141_105182                         1071 19 -      3730 A-ATAT------CAATTAT-----GGTCTGT
i Trachypithecus_melamera.k141_105182                    C 0 I 759
s Trachypithecus_obscurus.k141_190785                        29339 19 +     32220 A-ATAT------CAATTAT-----GGTCTGT
i Trachypithecus_obscurus.k141_190785                    C 0 I 760
s Trachypithecus_phayrei.ctg124                            5943436 19 +   6242583 A-ATAT------CAATTAT-----GGTCTGT
i Trachypithecus_phayrei.ctg124                          C 0 I 761
s Trachypithecus_pileatus.k141_2007326                       12688 19 +     20839 A-ATAT------CAATTAT-----GGTCTGT
i Trachypithecus_pileatus.k141_2007326                   C 0 I 766
s Tragulus_javanicus.TraJav_scaffold_40725                    2737 18 +     27266 --TTAC-CACT-TA----T-----GGCCTAT
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 I 898
s Tupaia_chinensis.KB320699.1                              2159773 19 +   4065304 A-ATAC-CACT-TT----T-----AGCTCAT
i Tupaia_chinensis.KB320699.1                            C 0 I 6196
s Tupaia_tana.TupTan_flattened_line_306982                    1797 19 -      4186 A-ATAC-CACT-TT----T-----AGCTCAT
i Tupaia_tana.TupTan_flattened_line_306982               C 0 N 0
s Tursiops_truncatus.MRVK01000835.1                       15740598 19 +  33153633 t-atat--caatta----t-----ggcccac
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 742
s Uropsilus_gracilis.UroGra_scaffold_12083                   55548 19 -     77625 t-atat--caacta----t-----cacccag
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 692
s Ursus_maritimus.KK499267.1                               4851732  6 -   5085361 -------------------------gccaat
i Ursus_maritimus.KK499267.1                             I 23 I 1013
s Vicugna_pacos.KN270157.1                                 5374257 19 -   5488506 t-tcat--cagtta----c-----agactat
i Vicugna_pacos.KN270157.1                               C 0 I 47
s Vulpes_lagopus.VulLag_flattened_line_30954                 13424  6 -     43706 -------------------------gccaat
i Vulpes_lagopus.VulLag_flattened_line_30954             I 23 I 826
s Xerus_inauris.XerIna_scaffold_2302                          3445 19 +    224448 a-atat--caagta----t-----agatcca
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 715
s Zapus_hudsonius.ZapHud_scaffold_11398                      16982 18 +     63895 A-GTAT-CAAT-TT----A-----AG-TCAT
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 516
s Ziphius_cavirostris.ZipCav_flattened_line_761354             898 19 -      1267 t-atat--caatta----t-----ggcccac
i Ziphius_cavirostris.ZipCav_flattened_line_761354       C 0 N 0
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57280 56 -     80660 I
e Sapajus_apella.ctg103                                    5422039 56 -   5703754 I
e Saimiri_ustus.k141_1484609                                 24698 57 -     61129 I
e Saimiri_sciureus.k141_2278166                               4554 57 -     23631 I
e Saimiri_oerstedii.k141_1487881                             41481 57 -     64574 I
e Saimiri_macrodon.k141_716185                               24802 57 +     45824 I
e Saimiri_cassiquiarensis.k141_2188234                       24707 57 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952365 57 - 121099817 I
e Saguinus_mystax.k141_4699220                                 731 56 -      7576 I
e Saguinus_midas.LG03                                    209476296 66 + 209938924 I
e Saguinus_labiatus.k141_4004060                              1403 57 +      2343 I
e Saguinus_inustus.k141_3945547                               1771 57 -      8737 I
e Saguinus_imperator.k141_1496743                             1323 57 +      2253 I
e Saguinus_bicolor.k141_8081                                  2639 66 +     42994 I
e Mico_schneideri.k141_916733                                        599 57 +      5107 I
e Mico_humeralifer.k141_1346949                               1012 57 +      1399 I
e Mico_argentatus.k141_1024458                                 599 57 -     20047 I
e Leontopithecus_rosalia.k141_464620                         27687 57 +     66356 I
e Leontopithecus_chrysomelas.k141_1519602                    30983 57 +     38576 I
e Leontocebus_nigricollis.k141_4610752                        9367 57 +     35603 I
e Leontocebus_illigeri.k141_1304848                           1680 57 -     35062 I
e Leontocebus_fuscicollis.k141_1820339                        9338 57 +     64341 I
e Chiropotes_albinasus.k141_2813271                           5964  2 +     11226 I
e Cebus_unicolor.k141_1837183                                 1748 56 +     14051 I
e Cebus_olivaceus.k141_1764483                                2019 56 +     28840 I
e Cebus_albifrons.Contig27                                25654081 56 +  26074798 I
e Cebuella_pygmaea.k141_793006                                 600 57 -     15088 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1574 57 -     12329 I
e Callithrix_jacchus.pat_scaffold_3                       23592760 57 - 189096842 I
e Callithrix_geoffroyi.k119_69176                              899 57 +      5377 I
e Callimico_goeldii.k141_737284                                604 57 -     31217 I
e Callibella_humilis.k141_10318                                963 57 +     27907 I
e Aotus_vociferans.k141_344750                               30359 57 -     47192 I
e Aotus_trivirgatus.k141_2152450                             17235 57 -     34685 I
e Aotus_nancymaae.KZ198451.1                               4299626 57 -   5030052 I
e Aotus_griseimembra.k141_2240599                            17199 57 -     34016 I
e Aotus_azarae.k141_3104676                                  17201 57 -     33861 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tapirus_terrestris.TapTer_scaffold_755                    389823 643 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      121344 643 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Octodon_degus.JH651603.1                                  750513 17 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184766 1004 -  29670104 I
e Manis_pentadactyla.KN006162.1                              53022 987 -    317179 I
e Manis_javanica.JSZB01003497.1                              20877 990 +    737560 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Jaculus_jaculus.JH725527.1                               8278673 121 -   9596543 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20664195 469 +  22651954 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               35993 651 +    498745 I
e Equus_caballus.CM000403.2                               18533964 651 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1286155 651 +   4378816 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    8624 649 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  675871 642 +   1390856 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    838411 659 +   1526836 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5047 647 -     25243 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Allactaga_bullata.AllBul_scaffold_9566                     75924 121 -     89534 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      11241 3 +     62944 CCC
s Acinonyx_jubatus.LLWD01001279.1                           830382 3 -   1699592 CCT
i Acinonyx_jubatus.LLWD01001279.1                        I 764 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     74488 3 +     87051 TCA
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 742 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9512948 3 -  29979442 tta
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 1013 C 0
s Ailurus_fulgens.LNAC01001112.1                             81914 2 -    347723 gg-
i Ailurus_fulgens.LNAC01001112.1                         I 899 I 6
s Allactaga_bullata.AllBul_scaffold_9566                     76045 3 -     89534 CCA
i Allactaga_bullata.AllBul_scaffold_9566                 I 121 C 0
s Allenopithecus_nigroviridis.k141_3361533                   19842 3 -     52922 CCG
i Allenopithecus_nigroviridis.k141_3361533               I 766 C 0
s Allochrocebus_lhoesti.k141_4309873                         19773 3 -     28001 CCG
i Allochrocebus_lhoesti.k141_4309873                     I 761 C 0
s Allochrocebus_preussi.k141_1442296                         10267 3 -     18505 CCG
i Allochrocebus_preussi.k141_1442296                     I 760 C 0
s Allochrocebus_solatus.k141_166128                          11125 3 -     12518 CCG
i Allochrocebus_solatus.k141_166128                      I 765 C 0
s Alouatta_belzebul.k141_3560514                             11462 3 +     51355 CTG
i Alouatta_belzebul.k141_3560514                         I 751 C 0
s Alouatta_caraya.k141_1701091                                4573 3 -     36483 CTG
i Alouatta_caraya.k141_1701091                           I 756 C 0
s Alouatta_discolor.k141_566626                              15025 3 +     28687 CTG
i Alouatta_discolor.k141_566626                          I 754 C 0
s Alouatta_juara.k141_1302312                                 3498 3 +     27940 CTG
i Alouatta_juara.k141_1302312                            I 755 C 0
s Alouatta_macconnelli.k141_918386                            4586 3 -      9457 CTG
i Alouatta_macconnelli.k141_918386                       I 755 C 0
s Alouatta_nigerrima.k141_1929159                             3544 3 +     30492 CTG
i Alouatta_nigerrima.k141_1929159                        I 755 C 0
s Alouatta_palliata.k141_2135620                              7765 3 +     47717 CTG
i Alouatta_palliata.k141_2135620                         I 754 C 0
s Alouatta_puruensis.k141_362188                              4266 3 +      5663 CTG
i Alouatta_puruensis.k141_362188                         I 755 C 0
s Alouatta_seniculus.k141_117119                             18717 3 +     50774 CTC
i Alouatta_seniculus.k141_117119                         I 755 C 0
s Ammotragus_lervia.NIVO01071767.1                          680654 3 -   2318259 CCA
i Ammotragus_lervia.NIVO01071767.1                       I 895 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303              1923 3 -     32520 CCA
i Antilocapra_americana.AntAmePen_scaffold_43303         I 884 C 0
s Aotus_azarae.k141_3104676                                  17258 3 -     33861 CCG
i Aotus_azarae.k141_3104676                              I 57 C 0
s Aotus_griseimembra.k141_2240599                            17256 3 -     34016 CCG
i Aotus_griseimembra.k141_2240599                        I 57 C 0
s Aotus_nancymaae.KZ198451.1                               4299683 3 -   5030052 ccg
i Aotus_nancymaae.KZ198451.1                             I 57 C 0
s Aotus_trivirgatus.k141_2152450                             17292 3 -     34685 CCG
i Aotus_trivirgatus.k141_2152450                         I 57 C 0
s Aotus_vociferans.k141_344750                               30416 3 -     47192 CCG
i Aotus_vociferans.k141_344750                           I 57 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      15700 3 +     20879 CCA
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 729 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21211944 3 -  21539123 CCG
i Ateles_geoffroyi_b.tarseq_1536                            I 738 C 0
s Ateles_belzebuth.k141_445860                               46743 3 -     48001 CCG
i Ateles_belzebuth.k141_445860                           I 738 C 0
s Ateles_chamek.k141_1806455                                 29544 3 -     30947 TCG
i Ateles_chamek.k141_1806455                             I 738 C 0
s Ateles_geoffroyi_a.k141_833924                               11319 3 -     89868 CCG
i Ateles_geoffroyi_a.k141_833924                           I 738 C 0
s Ateles_marginatus.k141_803263                              15701 3 -     40414 CCG
i Ateles_marginatus.k141_803263                          I 738 C 0
s Ateles_paniscus.k141_457735                                23589 3 +     72325 CCG
i Ateles_paniscus.k141_457735                            I 738 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15194988 3 +  23207421 cca
i Balaenoptera_acutorostrata.KI537508.1                  I 748 C 0
s Balaenoptera_bonaerensis.DF707048.1                         5453 3 -     18090 cca
i Balaenoptera_bonaerensis.DF707048.1                    I 748 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    31733 3 +     34529 CCA
i Beatragus_hunteri.BeaHun_scaffold_50177                I 882 C 0
s Bison_bison.KN261452.1                                    204368 3 -    288883 CCA
i Bison_bison.KN261452.1                                 I 894 C 0
s Bos_indicus.CM003047.1                                  20277605 3 +  48749331 CCA
i Bos_indicus.CM003047.1                                 I 893 C 0
s Bos_mutus.JH880303.1                                     1130159 3 -   1948126 CCA
i Bos_mutus.JH880303.1                                   I 893 C 0
s Bos_taurus.CM000203.6                                   18088243 3 +  45695690 CCA
i Bos_taurus.CM000203.6                                  I 893 C 0
s Bubalus_bubalis.KI419123.1                               2824195 3 +   4408762 CCA
i Bubalus_bubalis.KI419123.1                             I 892 C 0
s Callibella_humilis.k141_10318                               1020 3 +     27907 CTG
i Callibella_humilis.k141_10318                          I 57 C 0
s Callimico_goeldii.k141_737284                                661 3 -     31217 CCG
i Callimico_goeldii.k141_737284                          I 57 C 0
s Callithrix_geoffroyi.k119_69176                              956 3 +      5377 CCA
i Callithrix_geoffroyi.k119_69176                        I 57 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592817 3 - 189096842 CCA
i Callithrix_jacchus.pat_scaffold_3                      I 57 C 0
s Callithrix_kuhlii.k119_1168854                              1631 3 -     12329 CCA
i Callithrix_kuhlii.k119_1168854                         I 57 C 0
s CanFam4.chr16                                           17802641 3 -  60362399 CTA
i CanFam4.chr16                                          I 829 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     3387 3 -     43241 CTA
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 834 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9038082 3 -   9314153 cta
i Canis_lupus_dingo.QKWQ01000480.1                       I 827 C 0
s Canis_lupus_familiaris.chr16                            17962558 3 -  59632846 cta
i Canis_lupus_familiaris.chr16                           I 834 C 0
s Canis_lupus_orion.HG994398.1                            18503855 3 +  63665305 CTA
i Canis_lupus_orion.HG994398.1                           I 829 C 0
s Capra_aegagrus.CM003241.1                               18834684 3 +  46296322 CCA
i Capra_aegagrus.CM003241.1                              I 915 C 0
s Capra_hircus.CM004588.1                                 18065485 3 -  44709034 CCA
i Capra_hircus.CM004588.1                                I 899 C 0
s Carlito_syrichta.NW_007259797.1                           158602 3 -    496798 cca
i Carlito_syrichta.NW_007259797.1                        I 752 C 0
s Castor_canadensis.CasCan_scaffold_2074                    140145 3 +    179628 CCA
i Castor_canadensis.CasCan_scaffold_2074                 I 320 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     97156 3 +    217609 CCC
i Catagonus_wagneri.CatWag_scaffold_2839                 I 733 C 0
s Cebuella_pygmaea.k141_793006                                 657 3 -     15088 CTG
i Cebuella_pygmaea.k141_793006                           I 57 C 0
s Cebus_albifrons.Contig27                                25654137 3 +  26074798 CCG
i Cebus_albifrons.Contig27                               I 56 C 0
s Cebus_olivaceus.k141_1764483                                2075 3 +     28840 CCG
i Cebus_olivaceus.k141_1764483                           I 56 C 0
s Cebus_unicolor.k141_1837183                                 1804 3 +     14051 CCG
i Cebus_unicolor.k141_1837183                            I 56 C 0
s Cephalopachus_bancanus.k141_1423433                         8405 3 +     31688 CCA
i Cephalopachus_bancanus.k141_1423433                    I 1060 C 0
s Ceratotherium_simum.JH767749.1                          12234671 3 +  27778364 cca
i Ceratotherium_simum.JH767749.1                         I 647 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5694 3 -     25243 CCA
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 647 C 0
s Cercocebus_atys.KQ010504.1                               4480790 3 +   4669795 CCG
i Cercocebus_atys.KQ010504.1                             I 762 C 0
s Cercocebus_chrysogaster.k141_1540778                        5291 3 +     17872 CCG
i Cercocebus_chrysogaster.k141_1540778                   I 764 C 0
s Cercocebus_lunulatus.k141_3342297                           5879 3 -     14043 CCG
i Cercocebus_lunulatus.k141_3342297                      I 762 C 0
s Cercocebus_torquatus.k141_3057011                          13978 3 +     27781 CCG
i Cercocebus_torquatus.k141_3057011                      I 763 C 0
s Cercopithecus_ascanius.k141_1024104                        14138 3 -     20310 CCG
i Cercopithecus_ascanius.k141_1024104                    I 762 C 0
s Cercopithecus_cephus.k141_1078548                          17111 3 +     29689 CCA
i Cercopithecus_cephus.k141_1078548                      I 763 C 0
s Cercopithecus_diana.k141_1150327                           11870 3 -     20078 CCG
i Cercopithecus_diana.k141_1150327                       I 762 C 0
s Cercopithecus_hamlyni.k141_187466                          19784 3 -     27936 CCA
i Cercopithecus_hamlyni.k141_187466                      I 765 C 0
s Cercopithecus_lowei.k141_1854285                            8657 3 -     17152 CCG
i Cercopithecus_lowei.k141_1854285                       I 763 C 0
s Cercopithecus_albogularis.ctg5                                38828384 3 +  39242232 CCG
i Cercopithecus_albogularis.ctg5                               I 764 C 0
s Cercopithecus_mona.ctg39                                21227889 3 -  21565898 CCG
i Cercopithecus_mona.ctg39                               I 763 C 0
s Cercopithecus_neglectus.k141_2526306                       45001 3 -     53127 CCA
i Cercopithecus_neglectus.k141_2526306                   I 756 C 0
s Cercopithecus_nictitans.k141_1119862                        5262 3 +     13442 CCG
i Cercopithecus_nictitans.k141_1119862                   I 765 C 0
s Cercopithecus_petaurista.k141_807961                       19804 3 -     27947 CCG
i Cercopithecus_petaurista.k141_807961                   I 763 C 0
s Cercopithecus_pogonias.k141_2303387                         2832 3 +     10558 CCG
i Cercopithecus_pogonias.k141_2303387                    I 764 C 0
s Cercopithecus_roloway.k141_2581234                          5835 3 +     14005 CCG
i Cercopithecus_roloway.k141_2581234                     I 762 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            7403 3 -      8501 CCA
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       I 759 C 0
s Chlorocebus_aethiops.ctg25                              18433707 3 -  18827391 CCG
i Chlorocebus_aethiops.ctg25                             I 764 C 0
s Chlorocebus_pygerythrus.k141_1025673                       20203 3 -     50209 CCG
i Chlorocebus_pygerythrus.k141_1025673                   I 763 C 0
s Chlorocebus_sabaeus.CM001947.1                         135427209 3 + 135778131 CCG
i Chlorocebus_sabaeus.CM001947.1                         I 763 C 0
s Colobus_angolensis.KN981557.1                            1915745 3 +   2368649 ctg
i Colobus_angolensis.KN981557.1                          I 762 C 0
s Colobus_guereza.LG01                                   199953986 3 + 200372422 CTG
i Colobus_guereza.LG01                                   I 761 C 0
s Colobus_polykomos.k141_906115                              42295 3 +     84244 CTG
i Colobus_polykomos.k141_906115                          I 762 C 0
s Condylura_cristata.JH655891.1                           17552089 3 -  53390261 ctg
i Condylura_cristata.JH655891.1                          I 936 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           3926 3 +     23735 CCA
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      I 796 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 53708 3 +     63868 TCA
i Cricetomys_gambianus.CriGam_scaffold_18520             I 696 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               6141 3 -     19598 CTT
i Crocidura_indochinensis.CroInd_scaffold_37019          I 1085 I 44
s Cryptoprocta_ferox.CryFer_flattened_line_16129             31575 3 -     87169 CCT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 779 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    839070 2 +   1526836 -GA
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 659 C 0
s Dasypus_novemcinctus.JH564415.1                            70398 3 +   2246927 CCA
i Dasypus_novemcinctus.JH564415.1                        I 726 C 0
s Delphinapterus_leucas.KZ290073.1                        16814863 3 +  35494412 cca
i Delphinapterus_leucas.KZ290073.1                       I 740 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  676513 3 +   1390856 CCA
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 642 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    9273 3 +    198055 CCA
i Diceros_bicornis.DicBicMic_scaffold_5955               I 649 C 0
s Eidolon_helvum.KE797349.1                                    765 3 -     31197 cca
i Eidolon_helvum.KE797349.1                              N 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       315133 3 +    607251 CCA
i Elaphurus_davidianus.JRFZ01104969.1                    I 892 C 0
s Enhydra_lutris.KZ291758.1                               16338942 2 -  41312741 gg-
i Enhydra_lutris.KZ291758.1                              I 7978 I 6
s Eptesicus_fuscus.JH977646.1                              2150565 3 -  14770903 CCA
i Eptesicus_fuscus.JH977646.1                            I 1178 C 0
s Equus_asinus.JREZ01000139.1                              1286806 3 +   4378816 tcg
i Equus_asinus.JREZ01000139.1                            I 651 C 0
s Equus_caballus.CM000403.2                               18534615 3 -  39960074 tcG
i Equus_caballus.CM000403.2                              I 651 C 0
s Equus_przewalskii.KK951119.1                               36644 3 +    498745 tcG
i Equus_przewalskii.KK951119.1                           I 651 C 0
s Erythrocebus_patas.Contig38                             21210379 3 -  21539334 CCG
i Erythrocebus_patas.Contig38                            I 762 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           14290 3 +    133382 CCA
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 739 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             28239 3 -     44125 CCA
i Eubalaena_japonica.EubJap_flattened_line_31514         I 741 C 0
s Felis_catus.CM001381.2                                  20240156 3 + 206538554 CCG
i Felis_catus.CM001381.2                                 I 794 C 0
s Felis_catus_fca126.CM031415.1                           20199028 3 + 205367284 CCT
i Felis_catus_fca126.CM031415.1                          I 791 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 12688 3 -     36744 CCG
i Felis_nigripes.FelNig_flattened_line_20823             I 791 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               5766 3 -      9135 cca
i Galeopterus_variegatus.GalVar_scaffold_108840          I 812 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     612377 3 -    660261 CCA
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 901 C 0
s Glis_glis.GliGli_scaffold_19807                            35256 3 +     49224 CCA
i Glis_glis.GliGli_scaffold_19807                        I 750 C 0
s Gorilla_beringei.k141_3596273                              20467 3 -     32273 CCC
i Gorilla_beringei.k141_3596273                          I 19 C 0
s Gorilla_gorilla.LT578341.1                             186342603 3 + 186649187 CCC
i Gorilla_gorilla.LT578341.1                             I 19 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   37112 2 +     78134 -CA
i Graphiurus_murinus.GraMur_scaffold_10447               I 762 C 0
s Helogale_parvula.HelPar_flattened_line_2585               245391 3 +    327341 CCT
i Helogale_parvula.HelPar_flattened_line_2585            I 786 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 22973 3 +     36099 CCA
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 899 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               113722 3 +    128679 CCA
i Hippopotamus_amphibius.HipAmp_scaffold_9076            I 741 C 0
s Hipposideros_armiger.JXIK01000431.1                       113521 3 +   1711038 TGA
i Hipposideros_armiger.JXIK01000431.1                    I 802 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188               2087 3 +      9903 CCA
i Hipposideros_galeritus.HipGal_scaffold_101188          I 796 C 0
s Hoolock_leuconedys.ctg274                                    439288 3 +    630532 CTG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7525261 3 -   7955117 gaa
i Ictidomys_tridecemlineatus.JH393364.1                  I 2024 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                2070 3 -     31341 CCA
i Inia_geoffrensis.IniGeo_flattened_line_34779           I 741 C 0
s Jaculus_jaculus.JH725527.1                               8278794 3 -   9596543 cca
i Jaculus_jaculus.JH725527.1                             I 121 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                 1809 3 -     18011 CCA
i Kogia_breviceps.KogBre_flattened_line_81059            I 734 C 0
s Lagothrix_lagothricha.k141_1005387                         17762 3 -     38430 CCG
i Lagothrix_lagothricha.k141_1005387                     I 754 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    20249 3 -     42476 CCA
i Lasiurus_borealis.LasBor_scaffold_32767                I 1176 C 0
s Leontocebus_fuscicollis.k141_1820339                        9395 3 +     64341 CCG
i Leontocebus_fuscicollis.k141_1820339                   I 57 C 0
s Leontocebus_illigeri.k141_1304848                           1737 3 -     35062 CCG
i Leontocebus_illigeri.k141_1304848                      I 57 C 0
s Leontocebus_nigricollis.k141_4610752                        9424 3 +     35603 CCG
i Leontocebus_nigricollis.k141_4610752                   I 57 C 0
s Leontopithecus_chrysomelas.k141_1519602                    31040 3 +     38576 CCG
i Leontopithecus_chrysomelas.k141_1519602                I 57 C 0
s Leontopithecus_rosalia.k141_464620                         27744 3 +     66356 CCG
i Leontopithecus_rosalia.k141_464620                     I 57 C 0
s Leptonychotes_weddellii.KB714746.1                       3045204 3 +   3914936 cca
i Leptonychotes_weddellii.KB714746.1                     I 787 C 0
s Lipotes_vexillifer.KE559953.1                             271342 3 -    662738 cca
i Lipotes_vexillifer.KE559953.1                          I 958 C 0
s Lophocebus_aterrimus.ctg367                              1442339 3 +   1826925 CCG
i Lophocebus_aterrimus.ctg367                            I 764 C 0
s Lycaon_pictus.CM007581.1                                17958798 3 -  59628241 cta
i Lycaon_pictus.CM007581.1                               I 834 C 0
s Macaca_arctoides.k141_2326796                              12150 3 +     40492 CCG
i Macaca_arctoides.k141_2326796                          I 765 C 0
s Macaca_assamensis.Contig5                               59681400 3 +  60120075 CCG
i Macaca_assamensis.Contig5                              I 761 C 0
s Macaca_cyclopis.k119_18836                                 17946 3 -     26193 CCG
i Macaca_cyclopis.k119_18836                             I 790 C 0
s Macaca_fascicularis.k141_814140                            85721 3 -    114318 CCG
i Macaca_fascicularis.k141_814140                        I 787 C 0
s Macaca_fuscata.k119_255327                                 11412 3 -     23192 CCG
i Macaca_fuscata.k119_255327                             I 789 C 0
s Macaca_leonina.k141_3550399                                20877 3 -     29190 CCG
i Macaca_leonina.k141_3550399                            I 788 C 0
s Macaca_maura.k141_2733130                                  29456 3 +     37952 CCG
i Macaca_maura.k141_2733130                              I 789 C 0
s Macaca_mulatta.NC_041758.1                             186844529 3 + 187317192 CCG
i Macaca_mulatta.NC_041758.1                             I 787 C 0
s Macaca_nemestrina.KQ007038.1                            25463110 3 -  25927173 CCG
i Macaca_nemestrina.KQ007038.1                           I 788 C 0
s Macaca_nigra.k141_1655396                                  85314 3 +     89720 CCG
i Macaca_nigra.k141_1655396                              I 789 C 0
s Macaca_radiata.k141_3680011                                12326 3 +     20474 CCG
i Macaca_radiata.k141_3680011                            I 812 C 0
s Macaca_siberu.k141_635500                                  12100 3 -     14993 CCG
i Macaca_siberu.k141_635500                              I 787 C 0
s Macaca_silenus.Contig273                                  334963 3 -    668171 CCG
i Macaca_silenus.Contig273                               I 788 C 0
s Macaca_thibetana.k99_256239                                10390 3 -     24072 CCG
i Macaca_thibetana.k99_256239                            I 767 C 0
s Macaca_tonkeana.k141_1498238                               31021 3 -     45290 CCG
i Macaca_tonkeana.k141_1498238                           I 765 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                  5809 3 +    270270 CTA
i Macroglossus_sobrinus.MacSob_scaffold_4024             N 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23942612 3 -  24302211 CCG
i Mandrillus_leucophaeus.scaffold280                     I 770 C 0
s Mandrillus_sphinx.Contig270                               356720 3 +    752769 CCG
i Mandrillus_sphinx.Contig270                            I 763 C 0
s Marmota_marmota.CZRN01000018.1                          33106344 3 -  40650429 caa
i Marmota_marmota.CZRN01000018.1                         I 763 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        16368 3 -    207569 CTG
i Megaderma_lyra.MegLyr_scaffold_4542                    I 786 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             12706 2 +     13704 gg-
i Mellivora_capensis.MelCap_flattened_line_69365         I 1030 I 6
s Meriones_unguiculatus.MerUng_scaffold_7390                 36508 3 +    140813 TCA
i Meriones_unguiculatus.MerUng_scaffold_7390             I 720 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    6502 3 +     10310 CCA
i Mesoplodon_bidens.MesBid_scaffold_108144               I 740 C 0
s Mico_argentatus.k141_1024458                                 656 3 -     20047 CTG
i Mico_argentatus.k141_1024458                           I 57 C 0
s Mico_humeralifer.k141_1346949                               1069 3 +      1399 CTG
i Mico_humeralifer.k141_1346949                          I 57 C 0
s Mico_schneideri.k141_916733                                        656 3 +      5107 CTG
i Mico_schneideri.k141_916733                                  I 57 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1853557 3 +   8254450 CCA
i Miniopterus_natalensis.LDJU01000034.1                  I 979 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             37241 3 +     64694 CCA
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 979 C 0
s Miopithecus_ogouensis.k141_534055                          14287 3 -     28506 CCG
i Miopithecus_ogouensis.k141_534055                      I 764 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         8072 3 -      8324 CCA
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 787 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    30247 3 -    437263 CCA
i Monodon_monoceros.MonMon_M_scaffold_103                I 739 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 144276 3 -    366855 CCG
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 690 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   4559 3 +     82753 CCA
i Moschus_moschiferus.MosMos_scaffold_13123              I 1037 C 0
s Mungos_mungo.MunMun_flattened_line_40893                     392 3 +      5729 CCT
i Mungos_mungo.MunMun_flattened_line_40893               N 0 C 0
s Murina_feae.MurFea_scaffold_10363                            527 3 -     60290 CCG
i Murina_feae.MurFea_scaffold_10363                      n 1173 n 1173
s Mus_caroli.LT608237.1                                   84364997 3 - 120012414 TCA
i Mus_caroli.LT608237.1                                  I 854 C 0
s Mus_musculus.chr8                                       87654401 3 - 129401213 TCA
i Mus_musculus.chr8                                      I 753 C 0
s Mus_pahari.LT608297.1                                   31359104 3 -  89631738 TCA
i Mus_pahari.LT608297.1                                  I 734 C 0
s Mus_spretus.CM004101.1                                  90757188 3 - 130317789 TCA
i Mus_spretus.CM004101.1                                 I 1051 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              8739 3 +     14296 CCA
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 758 C 0
s Mustela_putorius.JH418006.1                               304020 2 -  14710649 gg-
i Mustela_putorius.JH418006.1                            I 955 I 6
s Myotis_brandtii.KE162005.1                                284259 3 -  10118263 CCA
i Myotis_brandtii.KE162005.1                             I 1168 C 0
s Myotis_davidii.KB100139.1                                1591587 3 -   6019432 cca
i Myotis_davidii.KB100139.1                              I 1178 C 0
s Myotis_lucifugus.GL429869.1                              3907686 3 -   4330536 CGa
i Myotis_lucifugus.GL429869.1                            I 1165 C 0
s Myotis_myotis.MyoMyo_scaffold_44643                         2021 3 +     25416 cca
i Myotis_myotis.MyoMyo_scaffold_44643                    I 1198 I 227
s Nannospalax_galili.KL204047.1                            2039965 3 -   3037898 tca
i Nannospalax_galili.KL204047.1                          I 735 C 0
s Nasalis_larvatus.k141_413338                               20352 3 +     21681 CCC
i Nasalis_larvatus.k141_413338                           I 774 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20309660 3 +  31847680 CCA
i Neomonachus_schauinslandi.NINY01007730.1               I 782 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5869212 3 +   7148211 cca
i Neophocaena_asiaeorientalis.KZ687982.1                 I 741 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    760496 3 +    783361 CTG
i Noctilio_leporinus.NocLep_scaffold_251                 I 720 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9152715 3 -   9404916 cca
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 819 C 0
s Ochotona_princeps.JH802162.1                             1367965 3 +   3988456 CTG
i Ochotona_princeps.JH802162.1                           I 696 C 0
s Odobenus_rosmarus.KB229312.1                              508806 3 -   2017862 cca
i Odobenus_rosmarus.KB229312.1                           I 786 C 0
s Odocoileus_virginianus.KZ100018.1                         147939 3 +    630418 CCA
i Odocoileus_virginianus.KZ100018.1                      I 896 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          82323 3 -    150152 CCA
i Okapia_johnstoni.LVCL01S0005463.1                      I 1167 C 0
s Orcinus_orca.KB316932.1                                  2785103 3 -  10937097 cca
i Orcinus_orca.KB316932.1                                I 739 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       466142 3 -    559221 cca
i Otocyon_megalotis.JAEUCK010005147.1                    I 822 C 0
s Ovis_aries.CM001607.2                                   17590772 3 +  44047080 CCA
i Ovis_aries.CM001607.2                                  I 947 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      178923 3 -    191736 CCA
i Ovis_canadensis.OviCan_scaffold_2572                   I 896 C 0
s Pan_paniscus.KQ411613.1                                    48589 3 +     80009 CCC
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189147456 3 + 189151597 CCC
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  154213 3 +    230217 CCT
i Panthera_onca.PanOnc_flattened_line_3271               I 779 C 0
s Panthera_pardus.KV860321.1                                267529 3 +  18783137 CCT
i Panthera_pardus.KV860321.1                             I 784 C 0
s Panthera_tigris.KE722367.1                               4724349 3 -   8748460 CCT
i Panthera_tigris.KE722367.1                             I 779 C 0
s Pantholops_hodgsonii.KE114653.1                          1269653 3 -   2937107 CCA
i Pantholops_hodgsonii.KE114653.1                        I 892 C 0
s Papio_anubis.CM001495.2                                183448511 2 + 183742232 -CG
i Papio_anubis.CM001495.2                                I 863 C 0
s Papio_cynocephalus.k141_4307930                            12059 3 +     20448 CCG
i Papio_cynocephalus.k141_4307930                        I 761 C 0
s Papio_hamadryas.Contig39                                20568870 3 +  20919399 CCG
i Papio_hamadryas.Contig39                               I 764 C 0
s Papio_kindae.k141_1936966                                  10816 3 +     41871 CCG
i Papio_kindae.k141_1936966                              I 764 C 0
s Papio_papio.k141_802527                                    14094 3 +     27711 CCG
i Papio_papio.k141_802527                                I 763 C 0
s Papio_ursinus.k141_5274964                                  5093 3 -     11374 CCG
i Papio_ursinus.k141_5274964                             I 763 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15635 3 -     78924 CAT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 778 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              12174 3 +     63832 CCA
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 741 C 0
s Piliocolobus_badius.k141_1142974                            3455 3 +     68526 CTG
i Piliocolobus_badius.k141_1142974                       I 765 C 0
s Piliocolobus_gordonorum.k141_381342                        43593 3 +     89929 CTG
i Piliocolobus_gordonorum.k141_381342                    I 766 C 0
s Piliocolobus_kirkii.k141_448987                            45009 3 +     51399 CTG
i Piliocolobus_kirkii.k141_448987                        I 766 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14301245 3 -  14605196 CTG
i Piliocolobus_tephrosceles.PDMG02000141.1               I 766 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             5345 3 +     22620 CCA
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 1185 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610           1714 3 +      7680 CCA
i Platanista_gangetica.PlaMin_flattened_line_173610      I 975 C 0
s Pongo_abelii.CM009266.2                                189135607 3 + 189387572 CCA
i Pongo_abelii.CM009266.2                                C 0 I 770
s Pongo_pygmaeus.ctg66                                     9575217 3 +   9816681 CCA
i Pongo_pygmaeus.ctg66                                   C 0 I 770
s Presbytis_comata.k141_677006                               78533 3 -     81375 CCG
i Presbytis_comata.k141_677006                           I 774 C 0
s Presbytis_mitrata.k141_1087752                             10369 3 +     19060 CCG
i Presbytis_mitrata.k141_1087752                         I 779 C 0
s Psammomys_obesus.NESX01036370.1                            14145 3 -     21651 tca
i Psammomys_obesus.NESX01036370.1                        I 722 C 0
s Pteronotus_parnellii.KE909381.1                            17803 3 -     21811 ccg
i Pteronotus_parnellii.KE909381.1                        I 734 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_76658           874 2 -      3818 gg-
i Pteronura_brasiliensis.PteBra_flattened_line_76658     N 0 I 7
s Pteropus_alecto.KB030862.1                              22987212 3 +  28871421 tca
i Pteropus_alecto.KB030862.1                             I 8079 C 0
s Pteropus_vampyrus.KN525825.1                             1370772 3 +   4952924 tca
i Pteropus_vampyrus.KN525825.1                           I 8654 C 0
s Puma_concolor.QAVW01001104.1                            20277416 3 -  38429054 CCT
i Puma_concolor.QAVW01001104.1                           I 784 C 0
s Pygathrix_cinerea.k141_1153803                             20346 3 -     91421 CCG
i Pygathrix_cinerea.k141_1153803                         I 776 C 0
s Pygathrix_nigripes_b.ctg100                                 7614471 3 +   7812017 CCG
i Pygathrix_nigripes_b.ctg100                               I 774 C 0
s Pygathrix_nigripes_a.k141_215492                             20376 3 -     72585 CCG
i Pygathrix_nigripes_a.k141_215492                         I 774 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  9777 3 +     55207 CCA
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 899 C 0
s Rattus_norvegicus.chr16                                 53574432 3 +  90668790 TCA
i Rattus_norvegicus.chr16                                I 692 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        369984 3 -   3329780 cca
i Rhinolophus_sinicus.LVEH01000134.1                     I 800 C 0
s Rhinopithecus_bieti.k119_1041714                             939 3 +      5697 CCG
i Rhinopithecus_bieti.k119_1041714                       I 775 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91241412 3 - 195417433 CCG
i Rhinopithecus_roxellana.NC_044550.1                    I 774 C 0
s Rhinopithecus_strykeri.ctg102                            7677060 3 +   7961872 CCG
i Rhinopithecus_strykeri.ctg102                          I 775 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_301684                  44 3 +       280 CCA
i Rousettus_aegyptiacus.RouAeg_scaffold_301684           N 0 C 0
s Saguinus_bicolor.k141_8081                                  2705 3 +     42994 CCG
i Saguinus_bicolor.k141_8081                             I 66 C 0
s Saguinus_imperator.k141_1496743                             1380 3 +      2253 CCA
i Saguinus_imperator.k141_1496743                        I 57 C 0
s Saguinus_inustus.k141_3945547                               1828 3 -      8737 CCA
i Saguinus_inustus.k141_3945547                          I 57 C 0
s Saguinus_labiatus.k141_4004060                              1460 3 +      2343 CGG
i Saguinus_labiatus.k141_4004060                         I 57 C 0
s Saguinus_midas.LG03                                    209476362 3 + 209938924 CCG
i Saguinus_midas.LG03                                    I 66 C 0
s Saguinus_mystax.k141_4699220                                 787 3 -      7576 CCA
i Saguinus_mystax.k141_4699220                           I 56 C 0
s Saiga_tatarica.SaiTat_scaffold_133311                       2229 3 +      9503 CCA
i Saiga_tatarica.SaiTat_scaffold_133311                  I 867 C 0
s Saimiri_boliviensis.NW_024100920.1                     119952422 3 - 121099817 cag
i Saimiri_boliviensis.NW_024100920.1                     I 57 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24764 3 +     46362 GAG
i Saimiri_cassiquiarensis.k141_2188234                   I 57 C 0
s Saimiri_macrodon.k141_716185                               24859 3 +     45824 GAG
i Saimiri_macrodon.k141_716185                           I 57 C 0
s Saimiri_oerstedii.k141_1487881                             41538 3 -     64574 GAG
i Saimiri_oerstedii.k141_1487881                         I 57 C 0
s Saimiri_sciureus.k141_2278166                               4611 3 -     23631 CAG
i Saimiri_sciureus.k141_2278166                          I 57 C 0
s Saimiri_ustus.k141_1484609                                 24755 3 -     61129 GAG
i Saimiri_ustus.k141_1484609                             I 57 C 0
s Sapajus_apella.ctg103                                    5422095 3 -   5703754 CCG
i Sapajus_apella.ctg103                                  I 56 C 0
s Sapajus_macrocephalus.k141_351809                          57336 3 -     80660 CCG
i Sapajus_macrocephalus.k141_351809                      I 56 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    156114 3 -    313613 ctg
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 639 C 0
s Semnopithecus_entellus.k141_1672505                         5205 3 -     12572 CCG
i Semnopithecus_entellus.k141_1672505                    I 765 C 0
s Semnopithecus_hypoleucos.k141_1615806                      32058 3 +     39453 CCG
i Semnopithecus_hypoleucos.k141_1615806                  I 766 C 0
s Semnopithecus_johnii.k141_670120                           12562 3 +     27826 CCG
i Semnopithecus_johnii.k141_670120                       I 766 C 0
s Semnopithecus_priam.k141_638794                            12108 3 -     19483 CCG
i Semnopithecus_priam.k141_638794                        I 767 C 0
s Semnopithecus_schistaceus.k141_1572284                      5404 3 -     12762 CCG
i Semnopithecus_schistaceus.k141_1572284                 I 765 C 0
s Semnopithecus_vetulus.k141_910252                           5247 3 +     13763 CCG
i Semnopithecus_vetulus.k141_910252                      I 765 C 0
s Spermophilus_dauricus.KZ294078.1                         1957145 3 -   3870691 caa
i Spermophilus_dauricus.KZ294078.1                       I 755 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             33132 2 +     97271 gg-
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 779 I 6
s Suricata_suricatta.SurSur_flattened_line_6629              21659 3 -    196729 CCT
i Suricata_suricatta.SurSur_flattened_line_6629          I 794 C 0
s Sus_scrofa.CM000828.4                                    6814753 3 +  69701581 CCC
i Sus_scrofa.CM000828.4                                  I 745 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                14339 3 +     41958 CCA
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 800 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      121987 3 -    156842 CCA
i Tapirus_indicus.TapInd_scaffold_9301                   I 643 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    390466 3 +    539355 CCA
i Tapirus_terrestris.TapTer_scaffold_755                 I 643 C 0
s Tarsius_lariang.k141_2201908                               29098 3 +     70052 CTG
i Tarsius_lariang.k141_2201908                           I 754 C 0
s Tarsius_wallacei.k141_254427                                3894 3 -     16117 CTG
i Tarsius_wallacei.k141_254427                           I 753 C 0
s Theropithecus_gelada.CM009954.1                        186433721 3 + 186847797 CCG
i Theropithecus_gelada.CM009954.1                        I 765 C 0
s Tolypeutes_matacus.TolMat_scaffold_85600                    5489 3 +     18632 CCA
i Tolypeutes_matacus.TolMat_scaffold_85600               I 768 C 0
s Trachypithecus_auratus.k141_722599                         16144 3 -     20410 CCG
i Trachypithecus_auratus.k141_722599                     I 766 C 0
s Trachypithecus_crepusculus.k141_582567                      5264 3 -     12674 CCG
i Trachypithecus_crepusculus.k141_582567                 I 761 C 0
s Trachypithecus_cristatus.k141_580354                       16252 3 +     19930 CCG
i Trachypithecus_cristatus.k141_580354                   I 766 C 0
s Trachypithecus_francoisi.k141_1412647                      12652 3 -     19997 CCG
i Trachypithecus_francoisi.k141_1412647                  I 766 C 0
s Trachypithecus_geei.k141_277701                            52795 3 -     60166 CCG
i Trachypithecus_geei.k141_277701                        I 766 C 0
s Trachypithecus_germaini.k141_912491                        20258 3 -     27529 CCG
i Trachypithecus_germaini.k141_912491                    I 766 C 0
s Trachypithecus_hatinhensis.k141_17719                       1886 3 +      9229 CCG
i Trachypithecus_hatinhensis.k141_17719                  I 764 C 0
s Trachypithecus_laotum.k141_907409                          13785 3 -     21137 CCG
i Trachypithecus_laotum.k141_907409                      I 761 C 0
s Trachypithecus_leucocephalus.k141_101510                    1890 3 +      9131 CCG
i Trachypithecus_leucocephalus.k141_101510               I 766 C 0
s Trachypithecus_melamera.k141_105182                         1849 3 -      3730 CCG
i Trachypithecus_melamera.k141_105182                    I 759 C 0
s Trachypithecus_obscurus.k141_190785                        30118 3 +     32220 CCG
i Trachypithecus_obscurus.k141_190785                    I 760 C 0
s Trachypithecus_phayrei.ctg124                            5944216 3 +   6242583 CCG
i Trachypithecus_phayrei.ctg124                          I 761 C 0
s Trachypithecus_pileatus.k141_2007326                       13473 3 +     20839 CCG
i Trachypithecus_pileatus.k141_2007326                   I 766 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    3653 3 +     27266 CCA
i Tragulus_javanicus.TraJav_scaffold_40725               I 898 C 0
s Tupaia_chinensis.KB320699.1                              2165988 3 +   4065304 caa
i Tupaia_chinensis.KB320699.1                            I 6196 C 0
s Tupaia_tana.TupTan_flattened_line_394                       2644 3 +     70247 CAA
i Tupaia_tana.TupTan_flattened_line_394                  N 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15741359 3 +  33153633 CCA
i Tursiops_truncatus.MRVK01000835.1                      I 742 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   56259 3 -     77625 CTT
i Uropsilus_gracilis.UroGra_scaffold_12083               I 692 C 0
s Ursus_maritimus.KK499267.1                               4852751 3 -   5085361 tta
i Ursus_maritimus.KK499267.1                             I 1013 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 14256 3 -     43706 CCA
i Vulpes_lagopus.VulLag_flattened_line_30954             I 826 C 0
s Xerus_inauris.XerIna_scaffold_2302                          4179 3 +    224448 CCA
i Xerus_inauris.XerIna_scaffold_2302                     I 715 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      17516 3 +     63895 CCA
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 516 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_1042354            589 3 -       797 CCA
i Ziphius_cavirostris.ZipCav_flattened_line_1042354      N 0 C 0
e Cheracebus_torquatus.k141_1170026                          64344 81 +     76511 I
e Cheracebus_regulus.k141_471822                            159875 81 -    216457 I
e Cheracebus_lugens.k141_1393925                              2308 81 +     17877 I
e Cheracebus_lucifer.k141_49986                               2432 81 -     17098 I
e Plecturocebus_moloch.k141_1031110                          24173 770 -     89403 I
e Plecturocebus_miltoni.k141_349282                          26800 770 +     90634 I
e Plecturocebus_hoffmannsi.k141_3303950                      31327 770 +     67232 I
e Plecturocebus_grovesi.k141_2013005                         31131 770 +     60166 I
e Plecturocebus_dubius.k141_1058799                          24170 769 -     87928 I
e Plecturocebus_cupreus.k141_2351393                         10387 769 +     39403 I
e Plecturocebus_cinerascens.k141_1164729                     24719 767 +     88961 I
e Plecturocebus_caligatus.k141_1382851                       23890 769 +     87950 I
e Plecturocebus_brunneus.k141_1495506                        19628 769 +     34906 I
e Plecturocebus_bernhardi.k141_2549090                       10464 770 -     39866 I
e Pithecia_vanzolinii.k141_1697688                            6204 767 -     23490 I
e Pithecia_pithecia.tarseq_165                             3942771 766 +   4542175 I
e Pithecia_pissinattii.k141_1824269                           6240 767 +     26198 I
e Pithecia_mittermeieri.k141_446740                          31244 767 +     52772 I
e Pithecia_hirsuta.k141_305604                                6218 767 +     29694 I
e Pithecia_chrysocephala.k141_839575                          2354 766 +     23417 I
e Pithecia_albicans.k141_1476471                              6226 767 +     26961 I
e Chiropotes_sagulatus.k141_1421488                          32762 766 -     50570 I
e Chiropotes_israelita.k141_747660                          100955 766 +    146308 I
e Cacajao_melanocephalus.k141_619699                         56612 766 -    119600 I
e Cacajao_hosomi.k141_81245                                  32511 767 -     95584 I
e Cacajao_calvus.k141_5142                                   63329 767 +     81800 I
e Cacajao_ayresi.k141_552049                                103826 767 -    122966 I
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202 0 +      8798 C
e Galago_senegalensis.k141_631886                             7400 0 +     11339 C
e Galago_moholi.ctg2040                                     429710 0 -    453645 C
e Chiropotes_albinasus.k141_2813271                           5964 2 +     11226 I
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445 0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734 0 -     33856 C
e Perodicticus_potto.k141_1186926                              597 0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219 0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vicugna_pacos.KN270157.1                                 5374276 47 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tonatia_saurophila.TonSau_scaffold_294                     83346 714 +    610378 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              107623 218 +    114563 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sorex_araneus.JH798187.1                                13653314 9235 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_42075                     3328 781 -     30804 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Petromus_typicus.PetTyp_scaffold_221660                      953 68 -      2102 I
e Peromyscus_maniculatus.KI615324.1                       18214296 731 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                       107181400 0 - 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Onychomys_torridus.OnyTor_scaffold_2986                    83560 721 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_7387                      632 3336 +    140218 I
e Octodon_degus.JH651603.1                                  750513 17 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869 0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414 0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947 0 - 196305487 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     73514 58 -     80779 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                18000 920 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184766 1004 -  29670104 I
e Manis_pentadactyla.KN006162.1                              53022 987 -    317179 I
e Manis_javanica.JSZB01003497.1                              20877 990 +    737560 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     5119 0 +     14121 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hystrix_cristata.HysCri_scaffold_5660                      85165 66 +    135385 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23857 3205 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  47344 1018 +     55795 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20664195 469 +  22651954 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689 0 +     41679 C
e Fukomys_damarensis.KN121974.1                             852683 59 +   3816255 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Ellobius_talpinus.LOJH01081419.1                            3450 1302 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          23540 1281 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 35607 61 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    39057 4687 +     67921 I
e Desmodus_rotundus.KZ672289.1                             8632254 708 +  20541912 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasyprocta_punctata.DasPun_flattened_line_15900             2089 64 -     75252 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  38262 54 +     51376 I
e Cricetulus_griseus.LT883664.1                           11668787 694 + 224834208 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1255607 4808 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Cavia_tschudii.CavTsc_scaffold_8919                       103029 62 +    143979 I
e Cavia_porcellus.DS562891.1                              18364147 62 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18351887 62 -  23392119 I
e Carollia_perspicillata.CarPer_scaffold_92756                7250 707 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                    3333 59 -     12242 I
e Camelus_ferus.KB017975.1                                  405530 47 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2337232 47 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10004760 47 -  17673402 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6909 705 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         538 0 +      5281 C
e Anoura_caudifer.AnoCau_scaffold_1412                      187499 706 +    412891 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      11244 2 +     62944 GT
s Acinonyx_jubatus.LLWD01001279.1                           830385 2 -   1699592 CT
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     74491 2 +     87051 AT
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9512951 2 -  29979442 ct
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             81922 2 -    347723 tt
i Ailurus_fulgens.LNAC01001112.1                         I 6 I 1
s Allactaga_bullata.AllBul_scaffold_9566                     76048 2 -     89534 GG
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   19845 2 -     52922 GT
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         19776 2 -     28001 GT
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                         10270 2 -     18505 GT
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                          11128 2 -     12518 GT
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             11465 2 +     51355 CT
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                4576 2 -     36483 TT
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              15028 2 +     28687 CT
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 3501 2 +     27940 TT
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            4589 2 -      9457 TT
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             3547 2 +     30492 TT
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              7768 2 +     47717 TT
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              4269 2 +      5663 TT
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             18720 2 +     50774 TT
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          680657 2 -   2318259 GT
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303              1926 2 -     32520 GT
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 C 0
s Aotus_azarae.k141_3104676                                  17261 2 -     33861 TT
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            17259 2 -     34016 TT
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299686 2 -   5030052 tT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             17295 2 -     34685 TT
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               30419 2 -     47192 TT
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      15703 2 +     20879 GC
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 1
s Ateles_geoffroyi_b.tarseq_1536                             21211947 2 -  21539123 TT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               46746 2 -     48001 TT
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 29547 2 -     30947 TT
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               11322 2 -     89868 TT
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              15704 2 -     40414 TT
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                23592 2 +     72325 TT
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15194991 2 +  23207421 gt
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         5456 2 -     18090 gT
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    31736 2 +     34529 GT
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    204371 2 -    288883 GT
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20277608 2 +  48749331 GT
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1130162 2 -   1948126 GT
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18088246 2 +  45695690 GT
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2824198 2 +   4408762 GT
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Callibella_humilis.k141_10318                               1023 2 +     27907 TT
i Callibella_humilis.k141_10318                          C 0 C 0
s Callimico_goeldii.k141_737284                                664 2 -     31217 TT
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                              959 2 +      5377 TT
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592820 2 - 189096842 TT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1634 2 -     12329 TT
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s CanFam4.chr16                                           17802644 2 -  60362399 CT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     3390 2 -     43241 CT
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9038085 2 -   9314153 CT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17962561 2 -  59632846 CT
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18503858 2 +  63665305 CT
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18834687 2 +  46296322 GT
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18065488 2 -  44709034 GT
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           158605 2 -    496798 gc
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    140148 2 +    179628 AT
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     97159 2 +    217609 AG
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_pygmaea.k141_793006                                 660 2 -     15088 TT
i Cebuella_pygmaea.k141_793006                           C 0 C 0
s Cebus_albifrons.Contig27                                25654140 2 +  26074798 TT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                2078 2 +     28840 TT
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 1807 2 +     14051 TT
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         8408 2 +     31688 GC
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12234674 2 +  27778364 CT
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5697 2 -     25243 CT
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4480793 2 +   4669795 GT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        5294 2 +     17872 GT
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           5882 2 -     14043 GT
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          13981 2 +     27781 GT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        14141 2 -     20310 GT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          17114 2 +     29689 GT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           11873 2 -     20078 GT
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          19787 2 -     27936 GT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            8660 2 -     17152 GT
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38828387 2 +  39242232 GT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21227892 2 -  21565898 GT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       45004 2 -     53127 GT
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        5265 2 +     13442 GT
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       19807 2 -     27947 GT
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         2835 2 +     10558 GT
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          5838 2 +     14005 GT
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            7406 2 -      8501 TC
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Chlorocebus_aethiops.ctg25                              18433710 2 -  18827391 GT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       20206 2 -     50209 GT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135427212 2 + 135778131 GT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1915748 2 +   2368649 GC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199953989 2 + 200372422 GC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              42298 2 +     84244 GC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17552092 2 -  53390261 gt
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           3929 2 +     23735 GT
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 53711 2 +     63868 GG
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             31578 2 -     87169 CT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    839072 2 +   1526836 GT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            70401 2 +   2246927 GG
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16814866 2 +  35494412 gT
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  676516 2 +   1390856 CT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    9276 2 +    198055 CT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE797349.1                                    768 2 -     31197 gc
i Eidolon_helvum.KE797349.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       315136 2 +    607251 GT
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Enhydra_lutris.KZ291758.1                               16338950 2 -  41312741 ct
i Enhydra_lutris.KZ291758.1                              I 6 I 6
s Eptesicus_fuscus.JH977646.1                              2150568 2 -  14770903 AT
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1286809 2 +   4378816 CT
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18534618 2 -  39960074 CT
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               36647 2 +    498745 CT
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21210382 2 -  21539334 GT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           14293 2 +    133382 GT
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             28242 2 -     44125 GT
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20240159 2 + 206538554 CT
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20199031 2 + 205367284 CT
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 12691 2 -     36744 CT
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               5769 2 -      9135 gt
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     612380 2 -    660261 GT
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            35259 2 +     49224 AT
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              20470 2 -     32273 GT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186342606 2 + 186649187 GT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   37114 2 +     78134 AT
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               245394 2 +    327341 CT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 22976 2 +     36099 GT
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               113725 2 +    128679 GT
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       113524 2 +   1711038 CT
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188               2090 2 +      9903 AT
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 C 0
s Hoolock_leuconedys.ctg274                                    439291 2 +    630532 GT
i Hoolock_leuconedys.ctg274                                 C 0 I 766
s Hyaena_hyaena.HyaHya_flattened_line_26932                  48362 1 +     55795 -T
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 1018 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7525264 2 -   7955117 gt
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 1
s Inia_geoffrensis.IniGeo_flattened_line_34779                2073 2 -     31341 GT
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8278797 2 -   9596543 gg
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                 1812 2 -     18011 GT
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         17765 2 -     38430 TT
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    20252 2 -     42476 GT
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        9398 2 +     64341 TT
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           1740 2 -     35062 TT
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        9427 2 +     35603 TT
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    31043 2 +     38576 TT
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         27747 2 +     66356 TT
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3045207 2 +   3914936 cT
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             271345 2 -    662738 gT
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1442342 2 +   1826925 GT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17958801 2 -  59628241 cT
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                              12153 2 +     40492 GT
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59681403 2 +  60120075 GT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 17949 2 -     26193 GT
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            85724 2 -    114318 GT
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 11415 2 -     23192 GT
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                20880 2 -     29190 GT
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  29459 2 +     37952 GT
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186844532 2 + 187317192 GT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25463113 2 -  25927173 GT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  85317 2 +     89720 GT
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                12329 2 +     20474 GT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  12103 2 -     14993 GT
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  334966 2 -    668171 GT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                10393 2 -     24072 GT
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               31024 2 -     45290 GT
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                  5812 2 +    270270 GT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23942615 2 -  24302211 GT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356723 2 +    752769 GT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33106347 2 -  40650429 gt
i Marmota_marmota.CZRN01000018.1                         C 0 I 1
s Megaderma_lyra.MegLyr_scaffold_4542                        16371 2 -    207569 GT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             12714 2 +     13704 ct
i Mellivora_capensis.MelCap_flattened_line_69365         I 6 I 6
s Meriones_unguiculatus.MerUng_scaffold_7390                 36511 2 +    140813 AT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    6505 2 +     10310 GT
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Mico_argentatus.k141_1024458                                 659 2 -     20047 TT
i Mico_argentatus.k141_1024458                           C 0 C 0
s Mico_humeralifer.k141_1346949                               1072 2 +      1399 TT
i Mico_humeralifer.k141_1346949                          C 0 C 0
s Mico_schneideri.k141_916733                                        659 2 +      5107 TT
i Mico_schneideri.k141_916733                                  C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1853560 2 +   8254450 GT
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             37244 2 +     64694 GT
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                          14290 2 -     28506 GT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         8075 2 -      8324 CT
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    30250 2 -    437263 GT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 144279 2 -    366855 GC
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   4562 2 +     82753 GT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_40893                     395 2 +      5729 CT
i Mungos_mungo.MunMun_flattened_line_40893               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                          10516 2 +     14753 GT
i Murina_feae.MurFea_scaffold_85699                      I 1173 C 0
s Mus_caroli.LT608237.1                                   84365000 2 - 120012414 AT
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87654404 2 - 129401213 AT
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31359107 2 -  89631738 AT
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90757191 2 - 130317789 AT
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              8742 2 +     14296 AT
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               304028 2 -  14710649 AT
i Mustela_putorius.JH418006.1                            I 6 I 3
s Myotis_brandtii.KE162005.1                                284262 2 -  10118263 GT
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1591590 2 -   6019432 gt
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3907689 2 -   4330536 gt
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_44643                         2251 2 +     25416 at
i Myotis_myotis.MyoMyo_scaffold_44643                    I 227 C 0
s Nannospalax_galili.KL204047.1                            2039968 2 -   3037898 gt
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               20355 2 +     21681 GT
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20309663 2 +  31847680 CT
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5869215 2 +   7148211 gT
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    760499 2 +    783361 GT
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9152718 2 -   9404916 ct
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Ochotona_princeps.JH802162.1                             1367968 2 +   3988456 CT
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              508809 2 -   2017862 CT
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         147942 2 +    630418 GT
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          82326 2 -    150152 GT
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  2785106 2 -  10937097 gt
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       466145 2 -    559221 CT
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17590775 2 +  44047080 GT
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      178926 2 -    191736 GT
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    48592 2 +     80009 GT
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189147459 2 + 189151597 GT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  154216 2 +    230217 CT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                267532 2 +  18783137 CT
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4724352 2 -   8748460 CT
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1269656 2 -   2937107 GT
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183448513 2 + 183742232 GT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            12062 2 +     20448 GT
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20568873 2 +  20919399 GT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                  10819 2 +     41871 GT
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    14097 2 +     27711 GT
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  5096 2 -     11374 GT
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15638 2 -     78924 CC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              12177 2 +     63832 GT
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            3458 2 +     68526 GT
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        43596 2 +     89929 GT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            45012 2 +     51399 GT
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14301248 2 -  14605196 GT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             5348 2 +     22620 GT
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610           1717 2 +      7680 GT
i Platanista_gangetica.PlaMin_flattened_line_173610      C 0 C 0
s Pongo_abelii.CM009266.2                                189136380 2 + 189387572 gt
i Pongo_abelii.CM009266.2                                I 770 C 0
s Pongo_pygmaeus.ctg66                                     9575990 2 +   9816681 GT
i Pongo_pygmaeus.ctg66                                   I 770 C 0
s Presbytis_comata.k141_677006                               78536 2 -     81375 GT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                             10372 2 +     19060 GT
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            14148 2 -     21651 at
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            17806 2 -     21811 gt
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_76658           883 2 -      3818 ct
i Pteronura_brasiliensis.PteBra_flattened_line_76658     I 7 I 6
s Pteropus_alecto.KB030862.1                              22987215 2 +  28871421 gt
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1370775 2 +   4952924 gt
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20277419 2 -  38429054 CT
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             20349 2 -     91421 GT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7614474 2 +   7812017 GT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             20379 2 -     72585 GT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  9780 2 +     55207 GT
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53574435 2 +  90668790 AT
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        369987 2 -   3329780 ga
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_1041714                             942 2 +      5697 GT
i Rhinopithecus_bieti.k119_1041714                       C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91241415 2 - 195417433 GT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7677063 2 +   7961872 GT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_301684                  47 2 +       280 GT
i Rousettus_aegyptiacus.RouAeg_scaffold_301684           C 0 C 0
s Saguinus_bicolor.k141_8081                                  2708 2 +     42994 TT
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                             1383 2 +      2253 TT
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               1831 2 -      8737 TT
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                              1463 2 +      2343 TT
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209476365 2 + 209938924 TT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                 790 2 -      7576 TT
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_133311                       2232 2 +      9503 GT
i Saiga_tatarica.SaiTat_scaffold_133311                  C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119952425 2 - 121099817 tt
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24767 2 +     46362 TT
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               24862 2 +     45824 TT
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             41541 2 -     64574 TT
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4614 2 -     23631 TT
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 24758 2 -     61129 TT
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5422098 2 -   5703754 TT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          57339 2 -     80660 TT
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    156117 2 -    313613 gt
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                         5208 2 -     12572 GT
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      32061 2 +     39453 GT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           12565 2 +     27826 GT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            12111 2 -     19483 GT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      5407 2 -     12762 GT
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           5250 2 +     13763 GT
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1957148 2 -   3870691 gt
i Spermophilus_dauricus.KZ294078.1                       C 0 I 1
s Spilogale_gracilis.SpiGra_flattened_line_13525             33140 2 +     97271 ct
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 6 I 5
s Suricata_suricatta.SurSur_flattened_line_6629              21662 2 -    196729 CT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6814756 2 +  69701581 GT
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                14342 2 +     41958 GT
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      121990 2 -    156842 CT
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    390469 2 +    539355 CT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               29101 2 +     70052 GC
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                3897 2 -     16117 GC
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186433724 2 + 186847797 GT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_85600                    5492 2 +     18632 TC
i Tolypeutes_matacus.TolMat_scaffold_85600               C 0 C 0
s Trachypithecus_auratus.k141_722599                         16147 2 -     20410 GT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      5267 2 -     12674 GT
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       16255 2 +     19930 GT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      12655 2 -     19997 GT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            52798 2 -     60166 GT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        20261 2 -     27529 GT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                       1889 2 +      9229 GT
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          13788 2 -     21137 GT
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                    1893 2 +      9131 GT
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                         1852 2 -      3730 GT
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        30121 2 +     32220 GT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5944219 2 +   6242583 GT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       13476 2 +     20839 GT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    3656 2 +     27266 GT
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tupaia_chinensis.KB320699.1                              2165991 2 +   4065304 gt
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       2647 2 +     70247 GT
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15741362 2 +  33153633 GT
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   56262 2 -     77625 TT
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4852754 2 -   5085361 ct
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 14259 2 -     43706 CT
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          4182 2 +    224448 GT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 1
s Zapus_hudsonius.ZapHud_scaffold_11398                      17519 2 +     63895 GT
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_1042354            592 2 -       797 GT
i Ziphius_cavirostris.ZipCav_flattened_line_1042354      C 0 C 0
e Cheracebus_torquatus.k141_1170026                          64344 81 +     76511 I
e Cheracebus_regulus.k141_471822                            159875 81 -    216457 I
e Cheracebus_lugens.k141_1393925                              2308 81 +     17877 I
e Cheracebus_lucifer.k141_49986                               2432 81 -     17098 I
e Plecturocebus_moloch.k141_1031110                          24173 770 -     89403 I
e Plecturocebus_miltoni.k141_349282                          26800 770 +     90634 I
e Plecturocebus_hoffmannsi.k141_3303950                      31327 770 +     67232 I
e Plecturocebus_grovesi.k141_2013005                         31131 770 +     60166 I
e Plecturocebus_dubius.k141_1058799                          24170 769 -     87928 I
e Plecturocebus_cupreus.k141_2351393                         10387 769 +     39403 I
e Plecturocebus_cinerascens.k141_1164729                     24719 767 +     88961 I
e Plecturocebus_caligatus.k141_1382851                       23890 769 +     87950 I
e Plecturocebus_brunneus.k141_1495506                        19628 769 +     34906 I
e Plecturocebus_bernhardi.k141_2549090                       10464 770 -     39866 I
e Pithecia_vanzolinii.k141_1697688                            6204 767 -     23490 I
e Pithecia_pithecia.tarseq_165                             3942771 766 +   4542175 I
e Pithecia_pissinattii.k141_1824269                           6240 767 +     26198 I
e Pithecia_mittermeieri.k141_446740                          31244 767 +     52772 I
e Pithecia_hirsuta.k141_305604                                6218 767 +     29694 I
e Pithecia_chrysocephala.k141_839575                          2354 766 +     23417 I
e Pithecia_albicans.k141_1476471                              6226 767 +     26961 I
e Chiropotes_sagulatus.k141_1421488                          32762 766 -     50570 I
e Chiropotes_israelita.k141_747660                          100955 766 +    146308 I
e Cacajao_melanocephalus.k141_619699                         56612 766 -    119600 I
e Cacajao_hosomi.k141_81245                                  32511 767 -     95584 I
e Cacajao_calvus.k141_5142                                   63329 767 +     81800 I
e Cacajao_ayresi.k141_552049                                103826 767 -    122966 I
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202 0 +      8798 C
e Galago_senegalensis.k141_631886                             7400 0 +     11339 C
e Galago_moholi.ctg2040                                     429710 0 -    453645 C
e Chiropotes_albinasus.k141_2813271                           5964 2 +     11226 I
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445 0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734 0 -     33856 C
e Perodicticus_potto.k141_1186926                              597 0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219 0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vicugna_pacos.KN270157.1                                 5374276 47 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tonatia_saurophila.TonSau_scaffold_294                     83346 714 +    610378 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              107623 218 +    114563 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sorex_araneus.JH798187.1                                13653314 9235 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_42075                     3328 781 -     30804 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Petromus_typicus.PetTyp_scaffold_221660                      953 68 -      2102 I
e Peromyscus_maniculatus.KI615324.1                       18214296 731 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                       107181400 0 - 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Onychomys_torridus.OnyTor_scaffold_2986                    83560 721 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_7387                      632 3336 +    140218 I
e Octodon_degus.JH651603.1                                  750513 17 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869 0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414 0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947 0 - 196305487 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     73514 58 -     80779 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                18000 920 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184766 1004 -  29670104 I
e Manis_pentadactyla.KN006162.1                              53022 987 -    317179 I
e Manis_javanica.JSZB01003497.1                              20877 990 +    737560 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     5119 0 +     14121 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hystrix_cristata.HysCri_scaffold_5660                      85165 66 +    135385 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23857 3205 -    143317 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20664195 469 +  22651954 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689 0 +     41679 C
e Fukomys_damarensis.KN121974.1                             852683 59 +   3816255 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Ellobius_talpinus.LOJH01081419.1                            3450 1302 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          23540 1281 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 35607 61 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    39057 4687 +     67921 I
e Desmodus_rotundus.KZ672289.1                             8632254 708 +  20541912 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasyprocta_punctata.DasPun_flattened_line_15900             2089 64 -     75252 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  38262 54 +     51376 I
e Crocidura_indochinensis.CroInd_scaffold_37019               6144 44 -     19598 I
e Cricetulus_griseus.LT883664.1                           11668787 694 + 224834208 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1255607 4808 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Cavia_tschudii.CavTsc_scaffold_8919                       103029 62 +    143979 I
e Cavia_porcellus.DS562891.1                              18364147 62 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18351887 62 -  23392119 I
e Carollia_perspicillata.CarPer_scaffold_92756                7250 707 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                    3333 59 -     12242 I
e Camelus_ferus.KB017975.1                                  405530 47 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2337232 47 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10004760 47 -  17673402 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6909 705 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         538 0 +      5281 C
e Anoura_caudifer.AnoCau_scaffold_1412                      187499 706 +    412891 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      11246 7 +     62944 AT-G-AA-G--C
s Acinonyx_jubatus.LLWD01001279.1                           830387 7 -   1699592 AC-G-AA-A--c
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     74493 7 +     87051 GT-G-GA-C--T
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 2
s Ailuropoda_melanoleuca.LNAT01000098.1                    9512953 7 -  29979442 aT-G-AA-C--c
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             81925 1 -    347723 a-----------
i Ailurus_fulgens.LNAC01001112.1                         I 1 I 6
s Allactaga_bullata.AllBul_scaffold_9566                     76050 7 -     89534 AT-G-GA-C--T
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 3
s Allenopithecus_nigroviridis.k141_3361533                   19847 7 -     52922 AT-G-AA-G--C
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         19778 7 -     28001 AT-G-AA-G--C
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                         10272 7 -     18505 AT-G-AA-G--C
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                          11130 7 -     12518 AT-G-AA-G--C
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             11467 7 +     51355 AT-G-AA-G--C
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                4578 7 -     36483 AT-G-AA-G--C
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              15030 7 +     28687 AT-G-AA-G--C
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 3503 7 +     27940 AT-G-AA-G--C
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            4591 7 -      9457 AT-G-AA-G--C
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             3549 7 +     30492 AT-G-AA-G--C
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              7770 7 +     47717 AT-G-AA-G--C
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              4271 7 +      5663 AT-G-AA-G--C
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             18722 7 +     50774 AT-G-AA-G--C
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          680659 7 -   2318259 AT-G-aa-a--t
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303              1928 7 -     32520 AT-G-GA-C--T
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 C 0
s Aotus_azarae.k141_3104676                                  17263 7 -     33861 AT-G-AA-G--C
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            17261 7 -     34016 AT-G-AA-G--C
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299688 7 -   5030052 AT-G-AA-G--C
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             17297 7 -     34685 AT-G-AA-G--C
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               30421 7 -     47192 AT-G-AA-G--C
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      15706 7 +     20879 AT-G-AA-T--C
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 1 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21211949 7 -  21539123 AT-G-AA-G--C
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               46748 7 -     48001 AT-G-AA-G--C
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 29549 7 -     30947 AT-G-AA-G--C
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               11324 7 -     89868 AT-G-AA-G--C
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              15706 7 -     40414 AT-G-AA-G--C
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                23594 7 +     72325 AT-G-AA-G--C
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15194993 7 +  23207421 AT-G-AA-c--c
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         5458 7 -     18090 AT-G-AA-c--c
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    31738 7 +     34529 AT-G-AA-C--T
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    204373 7 -    288883 AT-G-AA-C--T
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20277610 7 +  48749331 AT-G-AA-C--T
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1130164 7 -   1948126 AT-G-AA-C--T
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18088248 7 +  45695690 AT-G-AA-C--T
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2824200 7 +   4408762 AT-G-AA-C--T
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                104593 3 -    122966 ------A-G--C
i Cacajao_ayresi.k141_552049                             I 767 C 0
s Cacajao_calvus.k141_5142                                   64096 3 +     81800 ------A-G--C
i Cacajao_calvus.k141_5142                               I 767 C 0
s Cacajao_hosomi.k141_81245                                  33278 3 -     95584 ------A-G--C
i Cacajao_hosomi.k141_81245                              I 767 C 0
s Cacajao_melanocephalus.k141_619699                         57378 3 -    119600 ------A-G--C
i Cacajao_melanocephalus.k141_619699                     I 766 C 0
s Callibella_humilis.k141_10318                               1025 7 +     27907 AT-G-AC-G--C
i Callibella_humilis.k141_10318                          C 0 C 0
s Callimico_goeldii.k141_737284                                666 7 -     31217 AT-G-AC-G--C
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                              961 7 +      5377 AT-G-AT-G--C
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592822 7 - 189096842 AT-G-AC-G--C
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1636 7 -     12329 AT-G-AC-G--C
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s CanFam4.chr16                                           17802646 7 -  60362399 AT-G-AA-C--C
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     3392 7 -     43241 AT-G-AA-C--C
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9038087 7 -   9314153 AT-G-AA-c--c
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17962563 7 -  59632846 AT-G-AA-c--c
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18503860 7 +  63665305 AT-G-AA-c--c
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18834689 7 +  46296322 AT-G-Aa-c--t
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18065490 7 -  44709034 AT-G-Aa-c--t
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           158607 7 -    496798 AT-A-AA-c--c
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    140150 7 +    179628 AT-G-GA-C--T
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     97161 7 +    217609 AT-G-AA-T--C
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_pygmaea.k141_793006                                 662 7 -     15088 AT-G-AC-G--C
i Cebuella_pygmaea.k141_793006                           C 0 C 0
s Cebus_albifrons.Contig27                                25654142 7 +  26074798 AT-G-AA-G--C
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                2080 7 +     28840 AT-G-AA-G--C
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 1809 7 +     14051 AT-G-AA-G--C
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         8410 7 +     31688 AT-A-AA-C--C
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12234676 7 +  27778364 AT-G-Aa-c--c
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5699 7 -     25243 AT-G-AA-C--C
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4480795 7 +   4669795 AT-G-AA-G--c
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        5296 7 +     17872 AT-G-AA-G--C
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           5884 7 -     14043 AT-G-AA-G--C
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          13983 7 +     27781 AT-G-AA-G--C
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        14143 7 -     20310 AT-G-AA-G--C
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          17116 7 +     29689 AT-G-AA-G--C
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           11875 7 -     20078 AT-G-AA-G--C
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          19789 7 -     27936 AT-G-AA-G--C
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            8662 7 -     17152 AT-G-AA-G--C
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38828389 7 +  39242232 AT-G-AA-G--C
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21227894 7 -  21565898 AT-G-AA-G--C
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       45006 7 -     53127 AT-G-AA-G--C
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        5267 7 +     13442 AT-G-AA-G--C
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       19809 7 -     27947 AT-G-AA-G--C
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         2837 7 +     10558 AT-G-AA-G--C
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          5840 7 +     14005 AT-G-AA-G--C
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            7408 7 -      8501 AT-G-AA-C--C
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Chiropotes_albinasus.k141_2206961                           2449 3 -     15524 ------C-G--C
i Chiropotes_albinasus.k141_2206961                      I 2 C 0
s Chiropotes_israelita.k141_747660                          101721 3 +    146308 ------A-G--C
i Chiropotes_israelita.k141_747660                       I 766 C 0
s Chiropotes_sagulatus.k141_1421488                          33528 3 -     50570 ------A-G--C
i Chiropotes_sagulatus.k141_1421488                      I 766 C 0
s Chlorocebus_aethiops.ctg25                              18433712 7 -  18827391 AT-G-AA-G--C
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       20208 7 -     50209 AT-G-AA-G--C
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135427214 7 + 135778131 AT-G-AA-g--c
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1915750 7 +   2368649 AT-G-Aa-g--c
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199953991 7 + 200372422 AT-G-AA-G--C
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              42300 7 +     84244 AT-G-AA-G--C
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17552094 7 -  53390261 aa-g-aa-c--a
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           3931 6 +     23735 AT-A-CC-C---
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 53713 7 +     63868 GT-G-GA-C--T
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 1
s Cricetulus_griseus.LT883664.1                           11669481 7 + 224834208 GT-G-GA-G--T
i Cricetulus_griseus.LT883664.1                          I 694 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_16129             31580 7 -     87169 AT-A-AA-C--C
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    839074 9 +   1526836 AT-A-GA-CATC
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            70403 7 +   2246927 GT-G-GA-C--C
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16814868 7 +  35494412 AT-G-AA-c--c
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  676518 7 +   1390856 AT-G-aa-c--c
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    9278 7 +    198055 AT-G-AA-C--C
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE797349.1                                    770 7 -     31197 AT-A-Cc-c--a
i Eidolon_helvum.KE797349.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       315138 7 +    607251 AT-G-AA-C--T
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          24821 7 -    110024 GT-G-AA-C--T
i Ellobius_lutescens.LOEQ01008920.1                      I 1281 I 1
s Ellobius_talpinus.LOJH01081419.1                            4752 7 +      8657 GT-G-AA-C--T
i Ellobius_talpinus.LOJH01081419.1                       I 1302 I 1
s Enhydra_lutris.KZ291758.1                               16338958 2 -  41312741 --------a--c
i Enhydra_lutris.KZ291758.1                              I 6 C 0
s Eptesicus_fuscus.JH977646.1                              2150570 7 -  14770903 AT-g-ac-t--c
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1286811 7 +   4378816 AT-G-Aa-c--c
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18534620 7 -  39960074 AT-G-Ca-c--c
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               36649 7 +    498745 AT-G-Ca-c--c
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21210384 7 -  21539334 AT-G-AA-G--C
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           14295 7 +    133382 AT-G-AA-C--C
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             28244 7 -     44125 AT-G-AA-C--C
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20240161 7 + 206538554 AT-G-AA-A--C
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20199033 7 + 205367284 AT-G-AA-A--C
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 12693 7 -     36744 AT-G-AA-A--C
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               5771 7 -      9135 aA-G-AA-C--T
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     612382 7 -    660261 AT-G-AA-C--T
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            35261 7 +     49224 AT-G-GA-C--C
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              20472 7 -     32273 AT-G-AA-G--C
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186342608 7 + 186649187 AT-G-aa-g--c
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   37116 7 +     78134 AT-G-GA-C--C
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               245396 7 +    327341 AT-A-AA-C--C
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 22978 7 +     36099 AT-G-AA-C--T
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               113727 7 +    128679 AT-G-AA-C--C
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       113526 7 +   1711038 AT-A-Cc-t--c
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188               2092 7 +      9903 AT-A-CC-T--C
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 C 0
s Hoolock_leuconedys.ctg274                                    440059 7 +    630532 AT-G-GA-G--C
i Hoolock_leuconedys.ctg274                                 I 766 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  48363 7 +     55795 AT-A-AG-C--C
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7525267 7 -   7955117 at-a-ga-c--c
i Ictidomys_tridecemlineatus.JH393364.1                  I 1 I 4
s Inia_geoffrensis.IniGeo_flattened_line_34779                2075 7 -     31341 GT-G-AA-C--C
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8278799 7 -   9596543 at-G-GA-C--T
i Jaculus_jaculus.JH725527.1                             C 0 I 3
s Kogia_breviceps.KogBre_flattened_line_81059                 1814 7 -     18011 AT-G-AA-C--C
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         17767 7 -     38430 AT-G-AA-G--C
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    20254 7 -     42476 AT-G-AC-T--G
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        9400 7 +     64341 AT-G-AC-A--C
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           1742 7 -     35062 AT-G-AC-G--C
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        9429 7 +     35603 AT-G-AC-G--C
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    31045 7 +     38576 AT-G-AT-G--C
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         27749 7 +     66356 AT-G-AT-G--C
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3045209 7 +   3914936 AT-G-AA-C--c
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             271347 7 -    662738 AT-G-AA-c--c
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1442344 7 +   1826925 AT-G-AA-G--C
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17958803 7 -  59628241 AT-G-AA-c--c
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                              12155 7 +     40492 AT-G-AA-G--C
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59681405 7 +  60120075 AT-G-AA-G--C
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 17951 7 -     26193 AT-G-AA-G--C
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            85726 7 -    114318 AT-G-AA-G--C
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 11417 7 -     23192 AT-G-AA-G--C
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                20882 7 -     29190 AT-G-AA-G--C
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  29461 7 +     37952 AT-G-AA-G--C
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186844534 7 + 187317192 AT-G-AA-G--c
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25463115 7 -  25927173 AT-G-AA-G--c
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  85319 7 +     89720 AT-G-AA-G--C
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                12331 7 +     20474 AT-G-AA-G--C
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  12105 7 -     14993 AT-G-AA-G--C
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  334968 7 -    668171 AT-G-AA-G--C
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                10395 7 -     24072 AT-G-AA-G--C
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               31026 7 -     45290 AT-G-AA-G--C
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                  5814 7 +    270270 AT-A-CC-C--A
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23942617 7 -  24302211 AT-G-AA-G--C
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356725 7 +    752769 AT-G-AA-G--C
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33106350 7 -  40650429 at-g-ga-c--c
i Marmota_marmota.CZRN01000018.1                         I 1 I 4
s Megaderma_lyra.MegLyr_scaffold_4542                        16373 7 -    207569 AT-A-CC-C--C
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             12722 2 +     13704 --------a--c
i Mellivora_capensis.MelCap_flattened_line_69365         I 6 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 36513 7 +    140813 GT-G-GA-C--t
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 896
s Mesoplodon_bidens.MesBid_scaffold_108144                    6507 7 +     10310 AT-G-AA-C--C
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Mico_argentatus.k141_1024458                                 661 7 -     20047 AT-G-AT-G--C
i Mico_argentatus.k141_1024458                           C 0 C 0
s Mico_humeralifer.k141_1346949                               1074 7 +      1399 AT-G-AC-G--C
i Mico_humeralifer.k141_1346949                          C 0 C 0
s Mico_schneideri.k141_916733                                        661 7 +      5107 AT-G-AT-G--C
i Mico_schneideri.k141_916733                                  C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1853562 7 +   8254450 AG-G-Ac-c--c
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             37246 7 +     64694 AG-G-AC-C--C
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                          14292 7 -     28506 AT-G-AA-G--C
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         8077 7 -      8324 AT-G-AA-C--C
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    30252 7 -    437263 AT-G-AA-C--C
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 144281 7 -    366855 AT-A-TC-C--C
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   4564 7 +     82753 AT-G-AA-C--T
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_40893                     397 7 +      5729 AT-A-AA-C--C
i Mungos_mungo.MunMun_flattened_line_40893               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                          10518 7 +     14753 AT-G-AC-T--C
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84365002 7 - 120012414 GT-G-AA-C--A
i Mus_caroli.LT608237.1                                  C 0 I 1
s Mus_musculus.chr8                                       87654406 7 - 129401213 GT-G-GA-C--A
i Mus_musculus.chr8                                      C 0 I 1
s Mus_pahari.LT608297.1                                   31359109 7 -  89631738 GT-G-GA-T--G
i Mus_pahari.LT608297.1                                  C 0 I 1
s Mus_spretus.CM004101.1                                  90757193 7 - 130317789 GT-G-GA-C--A
i Mus_spretus.CM004101.1                                 C 0 I 1
s Muscardinus_avellanarius.MusAve_scaffold_82313              8744 7 +     14296 AT-G-GG-C--C
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               304033 2 -  14710649 --------A--C
i Mustela_putorius.JH418006.1                            I 3 C 0
s Myotis_brandtii.KE162005.1                                284264 7 -  10118263 AT-g-gc-t--g
i Myotis_brandtii.KE162005.1                             C 0 I 8
s Myotis_davidii.KB100139.1                                1591592 3 -   6019432 at-g--------
i Myotis_davidii.KB100139.1                              C 0 I 2
s Myotis_lucifugus.GL429869.1                              3907691 7 -   4330536 at-g-ac-t--g
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_44643                         2253 7 +     25416 at-g-ac-t--g
i Myotis_myotis.MyoMyo_scaffold_44643                    C 0 C 0
s Nannospalax_galili.KL204047.1                            2039970 7 -   3037898 aT-G-AG-C--T
i Nannospalax_galili.KL204047.1                          C 0 I 3
s Nasalis_larvatus.k141_413338                               20357 7 +     21681 AT-G-AA-G--C
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20309665 7 +  31847680 AT-G-AA-C--c
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5869217 7 +   7148211 AT-G-AA-c--c
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    760501 7 +    783361 AT-A-TC-C--C
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9152720 7 -   9404916 at-g-aa-c--c
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Ochotona_princeps.JH802162.1                             1367970 7 +   3988456 AT-G-AG-C--C
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              508811 7 -   2017862 AT-G-AA-A--c
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         147944 7 +    630418 AT-G-AA-C--T
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          82328 7 -    150152 AC-G-aa-c--t
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    84281 8 +    102263 GTGG-GA-G--T
i Onychomys_torridus.OnyTor_scaffold_2986                I 721 I 1
s Orcinus_orca.KB316932.1                                  2785108 7 -  10937097 AT-G-AA-c--c
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       466147 7 -    559221 AT-G-Aa-c--c
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17590777 7 +  44047080 AT-G-Aa-c--t
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      178928 7 -    191736 AT-G-AA-C--T
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    48594 7 +     80009 AT-G-Aa-g--c
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189147461 8 + 189151597 AT-G-AAgc--c
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  154218 7 +    230217 AT-G-AA-G--C
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                267534 7 +  18783137 AT-G-AA-G--C
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4724354 7 -   8748460 AT-G-AA-G--C
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1269658 7 -   2937107 AT-G-Aa-c--t
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183448515 7 + 183742232 AT-G-AA-A--C
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            12064 7 +     20448 AT-G-AA-G--C
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20568875 7 +  20919399 AT-G-AA-G--C
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                  10821 7 +     41871 AT-G-AA-G--C
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    14099 7 +     27711 AT-G-AA-G--C
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  5098 7 -     11374 AT-G-AA-G--C
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15640 7 -     78924 AT-G-AA-A--C
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18215027 4 -  18517816 -----ga-c--t
i Peromyscus_maniculatus.KI615324.1                      I 731 I 1
s Phocoena_phocoena.PhoPho_flattened_line_24159              12179 7 +     63832 AT-G-AA-C--C
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            3460 7 +     68526 AT-G-AA-G--C
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        43598 7 +     89929 AT-G-AA-G--C
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            45014 7 +     51399 AT-G-AA-G--C
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14301250 7 -  14605196 AT-G-Aa-g--c
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             5350 7 +     22620 AT-G-AC-T--C
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pithecia_albicans.k141_1476471                              6993 3 +     26961 ------A-G--C
i Pithecia_albicans.k141_1476471                         I 767 C 0
s Pithecia_chrysocephala.k141_839575                          3120 3 +     23417 ------A-G--C
i Pithecia_chrysocephala.k141_839575                     I 766 C 0
s Pithecia_hirsuta.k141_305604                                6985 3 +     29694 ------A-G--C
i Pithecia_hirsuta.k141_305604                           I 767 C 0
s Pithecia_mittermeieri.k141_446740                          32011 3 +     52772 ------A-G--C
i Pithecia_mittermeieri.k141_446740                      I 767 C 0
s Pithecia_pissinattii.k141_1824269                           7007 3 +     26198 ------A-G--C
i Pithecia_pissinattii.k141_1824269                      I 767 C 0
s Pithecia_pithecia.tarseq_165                             3943537 3 +   4542175 ------A-G--C
i Pithecia_pithecia.tarseq_165                           I 766 C 0
s Pithecia_vanzolinii.k141_1697688                            6971 3 -     23490 ------A-G--C
i Pithecia_vanzolinii.k141_1697688                       I 767 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610           1719 7 +      7680 AT-G-AA-C--C
i Platanista_gangetica.PlaMin_flattened_line_173610      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       11234 3 -     39866 ------A-G--C
i Plecturocebus_bernhardi.k141_2549090                   I 770 C 0
s Plecturocebus_brunneus.k141_1495506                        20397 3 +     34906 ------A-G--C
i Plecturocebus_brunneus.k141_1495506                    I 769 C 0
s Plecturocebus_caligatus.k141_1382851                       24659 3 +     87950 ------A-G--C
i Plecturocebus_caligatus.k141_1382851                   I 769 C 0
s Plecturocebus_cinerascens.k141_1164729                     25486 3 +     88961 ------A-G--C
i Plecturocebus_cinerascens.k141_1164729                 I 767 C 0
s Plecturocebus_cupreus.k141_2351393                         11156 3 +     39403 ------A-G--C
i Plecturocebus_cupreus.k141_2351393                     I 769 C 0
s Plecturocebus_dubius.k141_1058799                          24939 3 -     87928 ------A-G--C
i Plecturocebus_dubius.k141_1058799                      I 769 C 0
s Plecturocebus_grovesi.k141_2013005                         31901 3 +     60166 ------A-G--C
i Plecturocebus_grovesi.k141_2013005                     I 770 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      32097 3 +     67232 ------A-G--C
i Plecturocebus_hoffmannsi.k141_3303950                  I 770 C 0
s Plecturocebus_miltoni.k141_349282                          27570 3 +     90634 ------A-G--C
i Plecturocebus_miltoni.k141_349282                      I 770 C 0
s Plecturocebus_moloch.k141_1031110                          24943 3 -     89403 ------A-G--C
i Plecturocebus_moloch.k141_1031110                      I 770 C 0
s Pongo_abelii.CM009266.2                                189136382 7 + 189387572 at-g-aa-a--c
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9575992 7 +   9816681 AT-G-AA-A--C
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               78538 7 -     81375 AT-G-AA-G--C
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                             10374 7 +     19060 AT-G-AA-G--C
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            14150 7 -     21651 gT-G-GA-C--T
i Psammomys_obesus.NESX01036370.1                        C 0 I 897
s Pteronotus_parnellii.KE909381.1                            17808 7 -     21811 at-a-tc-c--g
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_76658           891 2 -      3818 --------a--c
i Pteronura_brasiliensis.PteBra_flattened_line_76658     I 6 C 0
s Pteropus_alecto.KB030862.1                              22987217 7 +  28871421 at-a-tc-c--a
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1370777 7 +   4952924 at-a-tc-c--a
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20277421 7 -  38429054 AT-G-AA-A--C
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             20351 7 -     91421 AT-G-AA-G--C
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7614476 7 +   7812017 AT-G-AA-G--C
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             20381 7 -     72585 AT-G-AA-G--C
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  9782 7 +     55207 AT-G-AA-C--T
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53574437 7 +  90668790 GT-G-GA-T--G
i Rattus_norvegicus.chr16                                C 0 I 1
s Rhinolophus_sinicus.LVEH01000134.1                        369989 7 -   3329780 aa-a-cc-c--c
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_1041714                             944 7 +      5697 AT-G-AA-G--C
i Rhinopithecus_bieti.k119_1041714                       C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91241417 7 - 195417433 AT-G-Aa-g--c
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7677065 7 +   7961872 AT-G-AA-G--C
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_301684                  49 7 +       280 AT-A-CC-C--A
i Rousettus_aegyptiacus.RouAeg_scaffold_301684           C 0 C 0
s Saguinus_bicolor.k141_8081                                  2710 7 +     42994 AT-G-AC-G--C
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                             1385 7 +      2253 AT-G-AC-G--C
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               1833 7 -      8737 AT-G-AC-G--C
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                              1465 7 +      2343 AT-G-AC-G--C
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209476367 7 + 209938924 AT-G-AC-G--C
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                 792 7 -      7576 AT-G-AC-G--C
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_133311                       2234 7 +      9503 AT-T-AA-C--T
i Saiga_tatarica.SaiTat_scaffold_133311                  C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119952427 7 - 121099817 aC-G-AA-G--C
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24769 7 +     46362 AC-G-AA-G--C
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               24864 7 +     45824 AC-G-AA-G--C
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             41543 7 -     64574 AC-G-AA-G--C
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4616 7 -     23631 AC-G-AA-G--C
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 24760 7 -     61129 AC-G-AA-G--C
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5422100 7 -   5703754 AT-G-AA-G--C
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          57341 7 -     80660 AT-G-AA-G--C
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    156119 7 -    313613 aa-g-aa-t--a
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                         5210 7 -     12572 AT-G-AA-G--C
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      32063 7 +     39453 AT-G-AA-G--C
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           12567 7 +     27826 AT-G-AA-G--C
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            12113 7 -     19483 AT-G-AA-G--C
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      5409 7 -     12762 AT-G-AA-G--C
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           5252 7 +     13763 AT-G-AA-G--C
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     4109 7 -     30804 GT-G-Ga-c--t
i Sigmodon_hispidus.SigHis_scaffold_42075                I 781 I 1
s Spermophilus_dauricus.KZ294078.1                         1957151 7 -   3870691 at-g-ga-c--c
i Spermophilus_dauricus.KZ294078.1                       I 1 I 4
s Spilogale_gracilis.SpiGra_flattened_line_13525             33147 2 +     97271 --------a--c
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 5 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              21664 7 -    196729 AT-A-AA-C--T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6814758 7 +  69701581 AT-G-AA-C--C
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                14344 7 +     41958 AT-G-AG-C--C
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      121992 7 -    156842 AT-G-AA-C--C
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    390471 7 +    539355 AT-G-AA-C--C
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               29103 7 +     70052 AT-A-AC-C--C
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                3899 7 -     16117 AT-A-AA-C--C
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186433726 7 + 186847797 AT-G-AA-G--C
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_85600                    5494 7 +     18632 GT-G-GA-C--C
i Tolypeutes_matacus.TolMat_scaffold_85600               C 0 C 0
s Trachypithecus_auratus.k141_722599                         16149 7 -     20410 AT-G-AA-G--C
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      5269 7 -     12674 AT-G-AA-G--C
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       16257 7 +     19930 AT-G-AA-G--C
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      12657 7 -     19997 AT-G-AA-G--T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            52800 7 -     60166 AT-G-AA-G--C
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        20263 7 -     27529 AT-G-AA-G--C
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                       1891 7 +      9229 AT-G-AA-G--T
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          13790 7 -     21137 AT-G-AA-G--C
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                    1895 7 +      9131 AT-G-AA-G--T
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                         1854 7 -      3730 AT-G-AA-G--C
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        30123 7 +     32220 AT-G-AA-G--C
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5944221 7 +   6242583 AT-G-AA-G--C
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       13478 7 +     20839 AT-G-AA-G--C
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    3658 7 +     27266 AT-G-AA-C--C
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tupaia_chinensis.KB320699.1                              2165993 5 +   4065304 aa-a-aa-----
i Tupaia_chinensis.KB320699.1                            C 0 I 1
s Tupaia_tana.TupTan_flattened_line_394                       2649 6 +     70247 AA-AAAA-----
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 1
s Tursiops_truncatus.MRVK01000835.1                       15741364 7 +  33153633 AT-G-AA-C--C
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   56264 7 -     77625 CT-G-AA-C--T
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4852756 7 -   5085361 aT-G-AA-C--c
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 14261 7 -     43706 AT-G-AA-C--C
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          4185 7 +    224448 AT-G-GA-C--C
i Xerus_inauris.XerIna_scaffold_2302                     I 1 I 4
s Zapus_hudsonius.ZapHud_scaffold_11398                      17521 7 +     63895 TT-G-GG-C--C
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 3
s Ziphius_cavirostris.ZipCav_flattened_line_1042354            594 7 -       797 AT-G-AA-C--C
i Ziphius_cavirostris.ZipCav_flattened_line_1042354      C 0 N 0
e Cheracebus_torquatus.k141_1170026                          64344 81 +     76511 I
e Cheracebus_regulus.k141_471822                            159875 81 -    216457 I
e Cheracebus_lugens.k141_1393925                              2308 81 +     17877 I
e Cheracebus_lucifer.k141_49986                               2432 81 -     17098 I
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202 0 +      8798 C
e Galago_senegalensis.k141_631886                             7400 0 +     11339 C
e Galago_moholi.ctg2040                                     429710 0 -    453645 C
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445 0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734 0 -     33856 C
e Perodicticus_potto.k141_1186926                              597 0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219 0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vicugna_pacos.KN270157.1                                 5374276 47 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tonatia_saurophila.TonSau_scaffold_294                     83346 714 +    610378 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              107623 218 +    114563 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sorex_araneus.JH798187.1                                13653314 9235 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Petromus_typicus.PetTyp_scaffold_221660                      953 68 -      2102 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                       107181400 0 - 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Ondatra_zibethicus.OndZib_scaffold_7387                      632 3336 +    140218 I
e Octodon_degus.JH651603.1                                  750513 17 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869 0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414 0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947 0 - 196305487 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     73514 58 -     80779 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                18000 920 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184766 1004 -  29670104 I
e Manis_pentadactyla.KN006162.1                              53022 987 -    317179 I
e Manis_javanica.JSZB01003497.1                              20877 990 +    737560 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     5119 0 +     14121 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hystrix_cristata.HysCri_scaffold_5660                      85165 66 +    135385 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23857 3205 -    143317 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20664195 469 +  22651954 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689 0 +     41679 C
e Fukomys_damarensis.KN121974.1                             852683 59 +   3816255 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 35607 61 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    39057 4687 +     67921 I
e Desmodus_rotundus.KZ672289.1                             8632254 708 +  20541912 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasyprocta_punctata.DasPun_flattened_line_15900             2089 64 -     75252 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  38262 54 +     51376 I
e Crocidura_indochinensis.CroInd_scaffold_37019               6144 44 -     19598 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1255607 4808 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Cavia_tschudii.CavTsc_scaffold_8919                       103029 62 +    143979 I
e Cavia_porcellus.DS562891.1                              18364147 62 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18351887 62 -  23392119 I
e Carollia_perspicillata.CarPer_scaffold_92756                7250 707 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                    3333 59 -     12242 I
e Camelus_ferus.KB017975.1                                  405530 47 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2337232 47 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10004760 47 -  17673402 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6909 705 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         538 0 +      5281 C
e Anoura_caudifer.AnoCau_scaffold_1412                      187499 706 +    412891 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      11253 2 +     62944 T--A
s Acinonyx_jubatus.LLWD01001279.1                           830394 2 -   1699592 t--g
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 1
s Ailuropoda_melanoleuca.LNAT01000098.1                    9512960 2 -  29979442 t--g
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             81932 2 -    347723 T--G
i Ailurus_fulgens.LNAC01001112.1                         I 6 I 10
s Allactaga_bullata.AllBul_scaffold_9566                     76060 3 -     89534 T-CA
i Allactaga_bullata.AllBul_scaffold_9566                 I 3 C 0
s Allenopithecus_nigroviridis.k141_3361533                   19854 2 -     52922 T--A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         19785 2 -     28001 T--A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                         10279 2 -     18505 T--A
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                          11137 2 -     12518 T--A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             11474 2 +     51355 T--A
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                4585 2 -     36483 T--A
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              15037 2 +     28687 T--A
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 3510 2 +     27940 T--A
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            4598 2 -      9457 T--A
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             3556 2 +     30492 T--A
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              7777 2 +     47717 T--A
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              4278 2 +      5663 T--A
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             18729 2 +     50774 T--A
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          680666 2 -   2318259 t--g
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303              1935 2 -     32520 T--G
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 C 0
s Aotus_azarae.k141_3104676                                  17270 2 -     33861 T--A
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            17268 2 -     34016 T--A
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299695 2 -   5030052 T--A
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             17304 2 -     34685 T--A
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               30428 2 -     47192 T--A
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      15713 2 +     20879 T--A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21211956 2 -  21539123 T--A
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               46755 2 -     48001 T--A
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 29556 2 -     30947 T--A
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               11331 2 -     89868 T--A
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              15713 2 -     40414 T--A
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                23601 2 +     72325 T--A
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15195000 2 +  23207421 t--g
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         5465 2 -     18090 t--g
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    31745 2 +     34529 T--G
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    204380 2 -    288883 T--G
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20277617 2 +  48749331 T--G
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1130171 2 -   1948126 T--G
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18088255 2 +  45695690 T--G
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2824207 2 +   4408762 T--G
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                104596 2 -    122966 T--A
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   64099 2 +     81800 T--A
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  33281 2 -     95584 T--A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         57381 2 -    119600 T--A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_10318                               1032 2 +     27907 T--G
i Callibella_humilis.k141_10318                          C 0 C 0
s Callimico_goeldii.k141_737284                                673 2 -     31217 T--A
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                              968 2 +      5377 T--G
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592829 2 - 189096842 T--G
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1643 2 -     12329 T--G
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s CanFam4.chr16                                           17802653 2 -  60362399 A--G
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     3399 2 -     43241 A--G
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9038094 2 -   9314153 a--g
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17962570 2 -  59632846 a--g
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18503867 2 +  63665305 a--g
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18834696 2 +  46296322 t--g
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18065497 2 -  44709034 t--g
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           158614 2 -    496798 t--a
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    140157 2 +    179628 T--A
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 4
s Catagonus_wagneri.CatWag_scaffold_2839                     97168 2 +    217609 T--G
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_pygmaea.k141_793006                                 669 2 -     15088 T--G
i Cebuella_pygmaea.k141_793006                           C 0 C 0
s Cebus_albifrons.Contig27                                25654149 2 +  26074798 T--A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                2087 2 +     28840 T--A
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 1816 2 +     14051 T--A
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         8417 2 +     31688 T--A
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12234683 2 +  27778364 t--g
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5706 2 -     25243 T--G
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4480802 2 +   4669795 t--a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        5303 2 +     17872 T--A
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           5891 2 -     14043 T--A
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          13990 2 +     27781 T--A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        14150 2 -     20310 T--A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          17123 2 +     29689 T--A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           11882 2 -     20078 T--A
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          19796 2 -     27936 T--A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            8669 2 -     17152 T--A
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38828396 2 +  39242232 T--A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21227901 2 -  21565898 T--A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       45013 2 -     53127 T--A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        5274 2 +     13442 T--A
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       19816 2 -     27947 T--A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         2844 2 +     10558 T--A
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          5847 2 +     14005 T--A
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            7415 4 -      8501 TATG
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Chiropotes_albinasus.k141_2206961                           2452 2 -     15524 T--A
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chiropotes_israelita.k141_747660                          101724 2 +    146308 G--A
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          33531 2 -     50570 G--A
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18433719 2 -  18827391 T--A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       20215 2 -     50209 T--A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135427221 2 + 135778131 t--a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1915757 2 +   2368649 t--a
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199953998 2 + 200372422 T--A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              42307 2 +     84244 T--A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17552101 2 -  53390261 t--a
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           3937 2 +     23735 T--G
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 53721 2 +     63868 T--T
i Cricetomys_gambianus.CriGam_scaffold_18520             I 1 C 0
s Cricetulus_griseus.LT883664.1                           11669489 2 + 224834208 T--T
i Cricetulus_griseus.LT883664.1                          I 1 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             31587 2 -     87169 T--G
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    839083 2 +   1526836 T--A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            70410 2 +   2246927 T--G
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16814875 2 +  35494412 t--g
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  676525 2 +   1390856 t--g
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    9285 2 +    198055 T--G
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE797349.1                                    777 2 -     31197 t--g
i Eidolon_helvum.KE797349.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       315145 2 +    607251 T--G
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          24829 2 -    110024 T--T
i Ellobius_lutescens.LOEQ01008920.1                      I 1 C 0
s Ellobius_talpinus.LOJH01081419.1                            4760 2 +      8657 T--T
i Ellobius_talpinus.LOJH01081419.1                       I 1 C 0
s Enhydra_lutris.KZ291758.1                               16338960 2 -  41312741 t--t
i Enhydra_lutris.KZ291758.1                              C 0 I 10
s Eptesicus_fuscus.JH977646.1                              2150577 2 -  14770903 t--g
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1286818 2 +   4378816 t--g
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18534627 2 -  39960074 t--g
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               36656 2 +    498745 t--g
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21210391 2 -  21539334 T--A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           14302 2 +    133382 T--G
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             28251 2 -     44125 T--G
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20240168 2 + 206538554 t--g
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20199040 2 + 205367284 t--g
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 12700 2 -     36744 T--G
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               5778 2 -      9135 T--A
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     612389 2 -    660261 T--G
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            35268 2 +     49224 T--A
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              20479 2 -     32273 T--A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186342615 2 + 186649187 t--a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   37123 2 +     78134 T--A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               245403 2 +    327341 T--T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 22985 2 +     36099 T--G
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               113734 2 +    128679 T--A
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       113533 2 +   1711038 t--g
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188               2099 2 +      9903 T--G
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 C 0
s Hoolock_leuconedys.ctg274                                    440066 2 +    630532 T--A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  48370 2 +     55795 T--G
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7525278 2 -   7955117 t--g
i Ictidomys_tridecemlineatus.JH393364.1                  I 4 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                2082 2 -     31341 T--G
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8278809 3 -   9596543 T-CA
i Jaculus_jaculus.JH725527.1                             I 3 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                 1821 2 -     18011 T--G
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         17774 2 -     38430 T--A
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    20261 2 -     42476 T--G
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 12
s Leontocebus_fuscicollis.k141_1820339                        9407 2 +     64341 T--A
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           1749 2 -     35062 T--A
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        9436 2 +     35603 T--A
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    31052 2 +     38576 T--G
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         27756 2 +     66356 T--G
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3045216 2 +   3914936 t--g
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             271354 2 -    662738 t--g
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1442351 2 +   1826925 T--A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17958810 2 -  59628241 a--g
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                              12162 2 +     40492 T--A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59681412 2 +  60120075 T--A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 17958 2 -     26193 T--A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            85733 2 -    114318 T--A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 11424 2 -     23192 T--A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                20889 2 -     29190 T--A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  29468 2 +     37952 T--A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186844541 2 + 187317192 t--a
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25463122 2 -  25927173 t--a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  85326 2 +     89720 T--A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                12338 2 +     20474 T--A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  12112 2 -     14993 T--A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  334975 2 -    668171 T--A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                10402 2 -     24072 T--A
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               31033 2 -     45290 T--A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                  5821 2 +    270270 T--G
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23942624 2 -  24302211 T--A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356732 2 +    752769 T--A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33106361 2 -  40650429 t--a
i Marmota_marmota.CZRN01000018.1                         I 4 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        16380 2 -    207569 T--G
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             12724 2 +     13704 t--t
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 10
s Meriones_unguiculatus.MerUng_scaffold_7390                 37416 2 +    140813 T--T
i Meriones_unguiculatus.MerUng_scaffold_7390             I 896 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    6514 2 +     10310 T--G
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Mico_argentatus.k141_1024458                                 668 2 -     20047 T--G
i Mico_argentatus.k141_1024458                           C 0 C 0
s Mico_humeralifer.k141_1346949                               1081 2 +      1399 T--G
i Mico_humeralifer.k141_1346949                          C 0 C 0
s Mico_schneideri.k141_916733                                        668 2 +      5107 T--G
i Mico_schneideri.k141_916733                                  C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1853569 2 +   8254450 t--g
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             37253 2 +     64694 T--G
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                          14299 2 -     28506 T--A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         8084 2 -      8324 T--G
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    30259 2 -    437263 T--G
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 144288 2 -    366855 T--G
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   4571 2 +     82753 T--G
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_40893                     404 2 +      5729 T--G
i Mungos_mungo.MunMun_flattened_line_40893               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                          10525 2 +     14753 T--G
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84365010 2 - 120012414 T--T
i Mus_caroli.LT608237.1                                  I 1 C 0
s Mus_musculus.chr8                                       87654414 2 - 129401213 T--T
i Mus_musculus.chr8                                      I 1 C 0
s Mus_pahari.LT608297.1                                   31359117 2 -  89631738 T--T
i Mus_pahari.LT608297.1                                  I 1 C 0
s Mus_spretus.CM004101.1                                  90757201 2 - 130317789 T--T
i Mus_spretus.CM004101.1                                 I 1 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              8751 2 +     14296 T--A
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               304035 2 -  14710649 t--t
i Mustela_putorius.JH418006.1                            C 0 I 10
s Myotis_brandtii.KE162005.1                                284279 2 -  10118263 t--g
i Myotis_brandtii.KE162005.1                             I 8 C 0
s Myotis_davidii.KB100139.1                                1591597 2 -   6019432 t--g
i Myotis_davidii.KB100139.1                              I 2 C 0
s Myotis_lucifugus.GL429869.1                              3907698 2 -   4330536 t--g
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_44643                         2260 2 +     25416 t--g
i Myotis_myotis.MyoMyo_scaffold_44643                    C 0 I 2
s Nannospalax_galili.KL204047.1                            2039980 2 -   3037898 t--a
i Nannospalax_galili.KL204047.1                          I 3 C 0
s Nasalis_larvatus.k141_413338                               20364 2 +     21681 T--A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20309672 2 +  31847680 t--g
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5869224 2 +   7148211 t--g
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    760508 2 +    783361 T--C
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9152727 2 -   9404916 t--g
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Ochotona_princeps.JH802162.1                             1367977 2 +   3988456 T--A
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              508818 2 -   2017862 t--g
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         147951 2 +    630418 T--G
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          82335 2 -    150152 t--g
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    84290 2 +    102263 T--T
i Onychomys_torridus.OnyTor_scaffold_2986                I 1 C 0
s Orcinus_orca.KB316932.1                                  2785115 2 -  10937097 t--g
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       466154 2 -    559221 t--g
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17590784 2 +  44047080 t--g
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      178935 2 -    191736 T--G
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    48601 2 +     80009 t--a
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189147469 2 + 189151597 t--a
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  154225 2 +    230217 T--G
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                267541 2 +  18783137 t--g
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4724361 2 -   8748460 t--g
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1269665 2 -   2937107 t--g
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183448522 2 + 183742232 T--A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            12071 2 +     20448 T--A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20568882 2 +  20919399 T--A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                  10828 2 +     41871 T--A
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    14106 2 +     27711 T--A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  5105 2 -     11374 T--A
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15647 2 -     78924 A--G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18215032 2 -  18517816 t--t
i Peromyscus_maniculatus.KI615324.1                      I 1 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              12186 2 +     63832 T--G
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            3467 2 +     68526 T--A
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        43605 2 +     89929 T--A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            45021 2 +     51399 T--A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14301257 2 -  14605196 t--a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             5357 2 +     22620 T--G
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pithecia_albicans.k141_1476471                              6996 2 +     26961 T--A
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          3123 2 +     23417 T--A
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                6988 2 +     29694 T--A
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          32014 2 +     52772 T--A
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           7010 2 +     26198 T--A
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3943540 2 +   4542175 T--A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            6974 2 -     23490 T--A
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610           1726 2 +      7680 C--G
i Platanista_gangetica.PlaMin_flattened_line_173610      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       11237 2 -     39866 T--A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        20400 2 +     34906 T--A
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       24662 2 +     87950 T--A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     25489 2 +     88961 T--A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         11159 2 +     39403 T--A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          24942 2 -     87928 T--A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         31904 2 +     60166 T--A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      32100 2 +     67232 T--A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          27573 2 +     90634 T--A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          24946 2 -     89403 T--A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189136389 2 + 189387572 t--a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9575999 2 +   9816681 T--A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               78545 2 -     81375 T--A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                             10381 2 +     19060 T--A
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            15054 2 -     21651 T--T
i Psammomys_obesus.NESX01036370.1                        I 897 C 0
s Pteronotus_parnellii.KE909381.1                            17815 2 -     21811 t--g
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_76658           893 2 -      3818 t--t
i Pteronura_brasiliensis.PteBra_flattened_line_76658     C 0 I 10
s Pteropus_alecto.KB030862.1                              22987224 2 +  28871421 t--g
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1370784 2 +   4952924 t--g
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20277428 2 -  38429054 t--g
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             20358 2 -     91421 T--A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7614483 2 +   7812017 T--A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             20388 2 -     72585 T--A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  9789 2 +     55207 T--G
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53574445 2 +  90668790 T--T
i Rattus_norvegicus.chr16                                I 1 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        369996 2 -   3329780 t--g
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_1041714                             951 2 +      5697 T--A
i Rhinopithecus_bieti.k119_1041714                       C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91241424 2 - 195417433 t--a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7677072 2 +   7961872 T--A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_301684                  56 2 +       280 T--G
i Rousettus_aegyptiacus.RouAeg_scaffold_301684           C 0 C 0
s Saguinus_bicolor.k141_8081                                  2717 2 +     42994 T--A
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                             1392 2 +      2253 T--A
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               1840 2 -      8737 T--A
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                              1472 2 +      2343 T--A
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209476374 2 + 209938924 T--A
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                 799 2 -      7576 T--A
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_133311                       2241 2 +      9503 T--G
i Saiga_tatarica.SaiTat_scaffold_133311                  C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119952434 2 - 121099817 T--A
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24776 2 +     46362 T--A
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               24871 2 +     45824 T--A
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             41550 2 -     64574 T--A
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4623 2 -     23631 T--A
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 24767 2 -     61129 T--A
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5422107 2 -   5703754 T--A
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          57348 2 -     80660 T--A
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    156126 2 -    313613 t--a
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 58
s Semnopithecus_entellus.k141_1672505                         5217 2 -     12572 T--A
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      32070 2 +     39453 T--A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           12574 2 +     27826 T--A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            12120 2 -     19483 T--A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      5416 2 -     12762 T--A
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           5259 2 +     13763 T--A
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     4117 2 -     30804 t--t
i Sigmodon_hispidus.SigHis_scaffold_42075                I 1 C 0
s Spermophilus_dauricus.KZ294078.1                         1957162 2 -   3870691 t--g
i Spermophilus_dauricus.KZ294078.1                       I 4 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             33149 2 +     97271 t--g
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 10
s Suricata_suricatta.SurSur_flattened_line_6629              21671 2 -    196729 T--G
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6814765 2 +  69701581 C--G
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                14351 2 +     41958 T--G
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      121999 2 -    156842 T--A
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    390478 2 +    539355 T--A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               29110 2 +     70052 T--A
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                3906 2 -     16117 T--A
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186433733 2 + 186847797 T--A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_85600                    5501 4 +     18632 TACG
i Tolypeutes_matacus.TolMat_scaffold_85600               C 0 C 0
s Trachypithecus_auratus.k141_722599                         16156 2 -     20410 T--A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      5276 2 -     12674 T--A
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       16264 2 +     19930 T--A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      12664 2 -     19997 T--A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            52807 2 -     60166 T--A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        20270 2 -     27529 T--A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                       1898 2 +      9229 T--A
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          13797 2 -     21137 T--A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                    1902 2 +      9131 T--A
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                         1861 2 -      3730 T--A
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        30130 2 +     32220 T--A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5944228 2 +   6242583 T--A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       13485 2 +     20839 T--A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    3665 2 +     27266 T--G
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tupaia_chinensis.KB320699.1                              2165999 2 +   4065304 a--a
i Tupaia_chinensis.KB320699.1                            I 1 C 0
s Tupaia_tana.TupTan_flattened_line_394                       2656 2 +     70247 A--A
i Tupaia_tana.TupTan_flattened_line_394                  I 1 C 0
s Tursiops_truncatus.MRVK01000835.1                       15741371 2 +  33153633 T--G
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   56271 2 -     77625 A--A
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4852763 2 -   5085361 t--g
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 14268 2 -     43706 T--G
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          4196 2 +    224448 T--A
i Xerus_inauris.XerIna_scaffold_2302                     I 4 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      17531 3 +     63895 T-TA
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 3 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_1424488              3 2 -       542 T--G
i Ziphius_cavirostris.ZipCav_flattened_line_1424488      N 0 C 0
e Cheracebus_torquatus.k141_1170026                          64344 81 +     76511 I
e Cheracebus_regulus.k141_471822                            159875 81 -    216457 I
e Cheracebus_lugens.k141_1393925                              2308 81 +     17877 I
e Cheracebus_lucifer.k141_49986                               2432 81 -     17098 I
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202 0 +      8798 C
e Galago_senegalensis.k141_631886                             7400 0 +     11339 C
e Galago_moholi.ctg2040                                     429710 0 -    453645 C
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445 0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734 0 -     33856 C
e Perodicticus_potto.k141_1186926                              597 0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219 0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vicugna_pacos.KN270157.1                                 5374276 47 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tonatia_saurophila.TonSau_scaffold_294                     83346 714 +    610378 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              107623 218 +    114563 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sorex_araneus.JH798187.1                                13653314 9235 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Petromus_typicus.PetTyp_scaffold_221660                      953 68 -      2102 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                       107181400 0 - 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Ondatra_zibethicus.OndZib_scaffold_7387                      632 3336 +    140218 I
e Octodon_degus.JH651603.1                                  750513 17 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869 0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414 0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947 0 - 196305487 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     73514 58 -     80779 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                18000 920 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184766 1004 -  29670104 I
e Manis_pentadactyla.KN006162.1                              53022 987 -    317179 I
e Manis_javanica.JSZB01003497.1                              20877 990 +    737560 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     5119 0 +     14121 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hystrix_cristata.HysCri_scaffold_5660                      85165 66 +    135385 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            23857 3205 -    143317 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20664195 469 +  22651954 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689 0 +     41679 C
e Fukomys_damarensis.KN121974.1                             852683 59 +   3816255 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 35607 61 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    39057 4687 +     67921 I
e Desmodus_rotundus.KZ672289.1                             8632254 708 +  20541912 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasyprocta_punctata.DasPun_flattened_line_15900             2089 64 -     75252 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  38262 54 +     51376 I
e Crocidura_indochinensis.CroInd_scaffold_37019               6144 44 -     19598 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1255607 4808 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Cavia_tschudii.CavTsc_scaffold_8919                       103029 62 +    143979 I
e Cavia_porcellus.DS562891.1                              18364147 62 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18351887 62 -  23392119 I
e Carollia_perspicillata.CarPer_scaffold_92756                7250 707 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                    3333 59 -     12242 I
e Camelus_ferus.KB017975.1                                  405530 47 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2337232 47 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10004760 47 -  17673402 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6909 705 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         538 0 +      5281 C
e Anoura_caudifer.AnoCau_scaffold_1412                      187499 706 +    412891 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     74500 2 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      11255  6 +     62944 TT-T--A------T-------------------T
s Acinonyx_jubatus.LLWD01001279.1                           830397  6 -   1699592 ------g------t-t-tg--------------t
i Acinonyx_jubatus.LLWD01001279.1                        I 1 I 1
s Ailuropoda_melanoleuca.LNAT01000098.1                    9512962  9 -  29979442 tg-t--g------t-t-t--------------at
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 1
s Allactaga_bullata.AllBul_scaffold_9566                     76063  6 -     89534 TT-T--G------T-------------------T
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   19856  6 -     52922 TT-C--A------T-------------------T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         19787  6 -     28001 TT-C--A------T-------------------T
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                         10281  6 -     18505 TT-C--A------T-------------------T
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                          11139  6 -     12518 TT-C--A------T-------------------T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             11476  3 +     51355 TT-T------------------------------
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                4587  3 -     36483 TT-T------------------------------
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              15039  3 +     28687 TT-T------------------------------
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 3512  3 +     27940 TT-T------------------------------
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            4600  3 -      9457 TT-T------------------------------
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             3558  3 +     30492 TT-T------------------------------
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              7779  3 +     47717 TT-T------------------------------
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              4280  3 +      5663 TT-T------------------------------
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             18731  3 +     50774 TT-T------------------------------
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          680668 15 -   2318259 tg-t--gtgtttat-t-tg--------------t
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303              1937 15 -     32520 TG-T--GTGTTTCT----------------TTGT
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 C 0
s Aotus_azarae.k141_3104676                                  17272  3 -     33861 TT-T------------------------------
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            17270  3 -     34016 TT-T------------------------------
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299697  3 -   5030052 TT-T------------------------------
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             17306  3 -     34685 TT-T------------------------------
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               30430  3 -     47192 TT-T------------------------------
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      15715  6 +     20879 TT-T--G------T-------------------T
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21211958  3 -  21539123 TT-T------------------------------
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               46757  3 -     48001 TT-T------------------------------
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 29558  3 -     30947 TT-T------------------------------
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               11333  3 -     89868 TT-T------------------------------
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              15715  3 -     40414 TT-T------------------------------
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                23603  3 +     72325 TT-T------------------------------
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15195002 13 +  23207421 tg-t--gt-tt-at-t-tg--------------t
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         5467 13 -     18090 tg-t--gt-tt-at-t-tg--------------t
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    31747 15 +     34529 TG-T--GTGTTTAT----------------TTGT
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 1
s Bison_bison.KN261452.1                                    204382 15 -    288883 CG-g--gtgtttat-t-tg--------------t
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20277619 15 +  48749331 CG-g--gtgtttat-t-tg--------------t
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1130173 15 -   1948126 CG-g--gtgtttat-t-tg--------------t
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18088257 15 +  45695690 CG-g--gtgtttat-t-tg--------------t
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2824209 15 +   4408762 Cg-t--gtgtttat-t-tg--------------t
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                104598  3 -    122966 TT-T------------------------------
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   64101  3 +     81800 TT-T------------------------------
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  33283  3 -     95584 TT-T------------------------------
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         57383  3 -    119600 TT-T------------------------------
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_10318                               1034  3 +     27907 TT-T------------------------------
i Callibella_humilis.k141_10318                          C 0 C 0
s Callimico_goeldii.k141_737284                                675  3 -     31217 CT-T------------------------------
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                              970  3 +      5377 TT-T------------------------------
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592831  3 - 189096842 TT-T------------------------------
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1645  3 -     12329 TT-T------------------------------
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s CanFam4.chr16                                           17802655  9 -  60362399 TG-T--A------T----------------TTAT
i CanFam4.chr16                                          C 0 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     3401  9 -     43241 TG-T--A------T----------------TTAT
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 I 1
s Canis_lupus_dingo.QKWQ01000480.1                         9038096  9 -   9314153 tg-t--a------t-t-t--------------at
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 1
s Canis_lupus_familiaris.chr16                            17962572  9 -  59632846 tg-t--a------t-t-t--------------at
i Canis_lupus_familiaris.chr16                           C 0 I 1
s Canis_lupus_orion.HG994398.1                            18503869  9 +  63665305 tg-t--a------t-t-t--------------at
i Canis_lupus_orion.HG994398.1                           C 0 I 1
s Capra_aegagrus.CM003241.1                               18834698 15 +  46296322 tg-t--gtgtttat-t-tg--------------t
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18065499 15 -  44709034 tg-t--gtgtttat-t-tg--------------t
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    3392  6 -     12242 TA-T--G------T-------------------T
i Capromys_pilorides.CapPil_scaffold_65020               I 59 C 0
s Carlito_syrichta.NW_007259797.1                           158616  4 -    496798 tt-t--a---------------------------
i Carlito_syrichta.NW_007259797.1                        C 0 I 1
s Castor_canadensis.CasCan_scaffold_2074                    140163  6 +    179628 TT-T--A------T-------------------T
i Castor_canadensis.CasCan_scaffold_2074                 I 4 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     97170  9 +    217609 TG-T--G------T----------------TTAT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 1
s Cavia_aperea.AVPZ01000300.1                             18351949  6 -  23392119 ta-t--g------a-------------------a
i Cavia_aperea.AVPZ01000300.1                            I 62 C 0
s Cavia_porcellus.DS562891.1                              18364209  6 -  23407841 ta-t--t------a-------------------a
i Cavia_porcellus.DS562891.1                             I 62 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                       103091  6 +    143979 TA-T--T------A-------------------A
i Cavia_tschudii.CavTsc_scaffold_8919                    I 62 C 0
s Cebuella_pygmaea.k141_793006                                 671  3 -     15088 TT-T------------------------------
i Cebuella_pygmaea.k141_793006                           C 0 C 0
s Cebus_albifrons.Contig27                                25654151  3 +  26074798 TT-T------------------------------
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                2089  3 +     28840 TT-T------------------------------
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 1818  3 +     14051 TT-T------------------------------
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         8419  4 +     31688 TT-T--A---------------------------
i Cephalopachus_bancanus.k141_1423433                    C 0 I 1
s Ceratotherium_simum.JH767749.1                          12234685 14 +  27778364 tg-t--g------t-t-tgt-t-tat-------t
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5708 14 -     25243 TG-T--G------T-----------TTGTTTATT
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4480804  6 +   4669795 tt-c--a------t-------------------t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        5305  6 +     17872 TT-C--A------T-------------------T
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           5893  6 -     14043 TT-C--A------T-------------------T
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          13992  6 +     27781 TT-C--A------T-------------------T
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        14152  6 -     20310 TT-C--A------T-------------------T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          17125  6 +     29689 TT-C--A------T-------------------T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           11884  6 -     20078 TT-C--A------T-------------------T
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          19798  6 -     27936 TT-C--A------T-------------------T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            8671  6 -     17152 TT-C--A------T-------------------T
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38828398  6 +  39242232 TT-C--A------T-------------------T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21227903  6 -  21565898 TT-C--A------T-------------------T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       45015  6 -     53127 TT-C--A------T-------------------T
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        5276  6 +     13442 TT-C--A------T-------------------T
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       19818  6 -     27947 TT-C--A------T-------------------T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         2846  6 +     10558 TT-C--A------T-------------------T
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          5849  6 +     14005 TT-C--A------T-------------------T
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            7419 10 -      8501 TG-C--T------G---------------AGCTC
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Chiropotes_albinasus.k141_2206961                           2454  3 -     15524 TT-T------------------------------
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chiropotes_israelita.k141_747660                          101726  3 +    146308 TT-T------------------------------
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          33533  3 -     50570 TT-T------------------------------
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18433721  6 -  18827391 TT-C--G------T-------------------T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       20217  6 -     50209 TT-C--A------T-------------------T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135427223  6 + 135778131 tt-c--a------t-------------------t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1915759  6 +   2368649 tt-t--a------t-------------------t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199954000  6 + 200372422 TT-T--A------T-------------------T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              42309  6 +     84244 TT-T--A------T-------------------T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17552103 12 -  53390261 tatttgt------t-tg---------------ct
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           3939 13 +     23735 TG-T--T------T------------TTATAATT
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 53723  6 +     63868 AC-T--A------T-------------------T
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11669491  6 + 224834208 GC-T--A------T-------------------T
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             31589  9 -     87169 TG-T--G------T----------------TTAT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 1
s Ctenodactylus_gundi.CteGun_scaffold_65                    839085  6 +   1526836 CT-T--A------T-------------------T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  38316  6 +     51376 TA-T--G------T-------------------T
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 54 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900             2153  6 -     75252 TA-T--A------C-------------------G
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 64 C 0
s Dasypus_novemcinctus.JH564415.1                            70412  9 +   2246927 GG-C--T------G----------------GCCC
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16814877 13 +  35494412 tg-t--gt-tt-at-t-tg--------------t
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  676527 14 +   1390856 tg-t--g------t-t-tgt-t-tat-------t
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    9287 14 +    198055 TG-T--G------T-----------TTGTTTATT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 35668  6 -     42551 TA-T--G------A-------------------A
i Dolichotis_patagonum.DolPat_scaffold_30833             I 61 C 0
s Eidolon_helvum.KE797349.1                                    779 12 -     31197 tg-t--t------t-t-t-t-aat---------t
i Eidolon_helvum.KE797349.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       315147 11 +    607251 TG-T--G----TAT----------------TTGT
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          24831  6 -    110024 AC-T--A------T-------------------T
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                            4762  6 +      8657 AC-T--A------T-------------------T
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2150579 13 -  14770903 tg-t--gt-ttt-t-t-tg--------------t
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1286820 14 +   4378816 tg-t--g------t-t-tgt-t-tat-------t
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18534629 14 -  39960074 tg-t--g------t-t-tgt-t-tat-------t
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               36658 14 +    498745 tg-t--g------t-t-tgt-t-tat-------t
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21210393  6 -  21539334 TT-C--A------T-------------------T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           14304 13 +    133382 TG-T--G--TTTAT----------------TTGT
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             28253 13 -     44125 TG-T--G--TTTAT----------------TTGT
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20240170  9 + 206538554 tg-t--g------t-t-tg--------------t
i Felis_catus.CM001381.2                                 C 0 I 1
s Felis_catus_fca126.CM031415.1                           20199042  9 + 205367284 tg-t--g------t-t-tg--------------t
i Felis_catus_fca126.CM031415.1                          C 0 I 1
s Felis_nigripes.FelNig_flattened_line_20823                 12702  9 -     36744 TG-T--G------T----------------TTGT
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 1
s Fukomys_damarensis.KN121974.1                             852742  6 +   3816255 tg-t--a------a-------------------a
i Fukomys_damarensis.KN121974.1                          I 59 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               5780  6 -      9135 TT-T--A------T-------------------T
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     612391 15 -    660261 TA-C--GTGTTTAT----------------TTGT
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            35270  6 +     49224 TT-T--A------C-------------------T
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              20481  6 -     32273 TT-T--A------T-------------------T
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186342617  6 + 186649187 tt-t--a------t-------------------t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   37125  6 +     78134 TG-T--A------C-------------------T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               245405  9 +    327341 TG-C--A------T----------------TTAT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 1
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 22987 15 +     36099 TG-T--GTGTTTAT----------------TTGT
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               113736 13 +    128679 TG-T--G--TTTAT----------------ATAT
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       113535 12 +   1711038 tg-t--t------t-t-t-t-aat---------t
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188               2101 12 +      9903 TG-T--T------T-------------TTTAATT
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 C 0
s Hoolock_leuconedys.ctg274                                    440068  6 +    630532 TT-T--A------T-------------------T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  48372  9 +     55795 TG-T--G------T----------------TTTT
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 1
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            27062  6 -    143317 TA-T--G------A-------------------A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 3205 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      85231  6 +    135385 TC-T--A------T-------------------T
i Hystrix_cristata.HysCri_scaffold_5660                  I 66 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7525280  6 -   7955117 tt-t--g------t-------------------t
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                2084 13 -     31341 TG-T--G--TTTAT----------------TTGT
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8278812  6 -   9596543 TT-T--G------T-------------------T
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                 1823 13 -     18011 TG-T--G--TTTAT----------------TTGT
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         17776  3 -     38430 TT-T------------------------------
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_50988                    19056 13 +     29960 tg-t--gtgt--gtgtg----------------t
i Lasiurus_borealis.LasBor_scaffold_50988                I 1185 C 0
s Leontocebus_fuscicollis.k141_1820339                        9409  3 +     64341 TT-T------------------------------
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           1751  3 -     35062 TT-T------------------------------
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        9438  3 +     35603 TT-A------------------------------
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    31054  3 +     38576 TT-T------------------------------
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         27758  3 +     66356 TT-T------------------------------
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3045218  9 +   3914936 tg-t--g------t-t-t--------------at
i Leptonychotes_weddellii.KB714746.1                     C 0 I 1
s Lipotes_vexillifer.KE559953.1                             271356 13 -    662738 tg-t--gt-tt-at-t-tg--------------t
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1442353  6 +   1826925 TT-C--A------T-------------------T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17958812  9 -  59628241 tg-t--a------t-t-t--------------at
i Lycaon_pictus.CM007581.1                               C 0 I 1
s Macaca_arctoides.k141_2326796                              12164  6 +     40492 TT-T--A------T-------------------T
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59681414  6 +  60120075 TT-C--A------T-------------------T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 17960  6 -     26193 TT-C--A------T-------------------T
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            85735  6 -    114318 TT-C--A------T-------------------T
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 11426  6 -     23192 TT-C--A------T-------------------T
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                20891  6 -     29190 TT-C--A------T-------------------T
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  29470  6 +     37952 TT-C--A------T-------------------T
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186844543  6 + 187317192 tt-c--a------t-------------------t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25463124  6 -  25927173 tt-c--a------t-------------------t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  85328  6 +     89720 TT-C--A------T-------------------T
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                12340  6 +     20474 TT-C--A------T-------------------T
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  12114  6 -     14993 TT-C--A------T-------------------T
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  334977  6 -    668171 TT-C--A------T-------------------T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                10404  6 -     24072 TT-C--A------T-------------------T
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               31035  6 -     45290 TT-C--A------T-------------------T
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                  5823 12 +    270270 TG-T--T------T-------------TTTAATT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23942626  6 -  24302211 TT-C--A------T-------------------T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356734  6 +    752769 TT-C--A------T-------------------T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33106363  6 -  40650429 tt-t--g------t-------------------t
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        16382 15 -    207569 TG-G--T------T----------TGTTTTTATT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 37418  6 +    140813 AC-T--A------T-------------------T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    6516 13 +     10310 TG-T--G--TTTAT----------------TTGT
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Mico_argentatus.k141_1024458                                 670  3 -     20047 TT-T------------------------------
i Mico_argentatus.k141_1024458                           C 0 C 0
s Mico_humeralifer.k141_1346949                               1083  3 +      1399 TT-T------------------------------
i Mico_humeralifer.k141_1346949                          C 0 C 0
s Mico_schneideri.k141_916733                                        670  3 +      5107 TT-T------------------------------
i Mico_schneideri.k141_916733                                  C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1853571 10 +   8254450 tc-t--tt-----tgt-t---------------t
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             37255  6 +     64694 TC-T--T-----TT--------------------
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 5
s Miopithecus_ogouensis.k141_534055                          14301  6 -     28506 TT-C--A------T-------------------T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         8086  9 -      8324 TG-T--G------T----------------TTat
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 1
s Monodon_monoceros.MonMon_M_scaffold_103                    30261 13 -    437263 TG-T--G--TTTAT----------------TTGT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 144290  9 -    366855 CA-C--G------T----------------GTGT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   4573 15 +     82753 TG-T--GTGTTTAT----------------TTGT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_40893                     406  9 +      5729 TG-T--G------T----------------TTAT
i Mungos_mungo.MunMun_flattened_line_40893               C 0 I 1
s Murina_feae.MurFea_scaffold_85699                          10527  9 +     14753 TG-T--G--TGTGT--------------------
i Murina_feae.MurFea_scaffold_85699                      C 0 I 11
s Mus_caroli.LT608237.1                                   84365012  6 - 120012414 GC-T--A------T-------------------T
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87654416  6 - 129401213 GC-T--A------T-------------------T
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31359119  6 -  89631738 GC-T--A------T-------------------T
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90757203  6 - 130317789 GC-T--A------T-------------------T
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              8753  6 +     14296 TT-T--A------C-------------------T
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     73572  6 -     80779 TA-T--A------T-------------------T
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 58 C 0
s Myotis_brandtii.KE162005.1                                284281 23 -  10118263 tg-t--gtgt--gtgtgtgtgtgtgtg------t
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1591599 23 -   6019432 tg-t--gtgt--gtgtgtgtgtgtgtg------t
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3907700 23 -   4330536 tg-t--gtgt--gtgtgtgtgtgtgtg------t
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_44643                         2264 15 +     25416 -------------tgtgtgtgtgtgtg------t
i Myotis_myotis.MyoMyo_scaffold_44643                    I 2 C 0
s Nannospalax_galili.KL204047.1                            2039982  6 -   3037898 tt-t--g------t-------------------t
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               20366  6 +     21681 TT-T--A------T-------------------T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20309674  9 +  31847680 tg-t--g------t-t-t--------------at
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 1
s Neophocaena_asiaeorientalis.KZ687982.1                   5869226 13 +   7148211 tg-t--gt-tt-at-t-tg--------------t
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    760510  9 +    783361 TG-T--G------T----------------GTGT
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9152729  9 -   9404916 tg-t--a------t-t-t--------------at
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 1
s Ochotona_princeps.JH802162.1                             1367979  5 +   3988456 T--T--A------T-------------------T
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              508820  9 -   2017862 tg-t--g------t-t-t--------------at
i Odobenus_rosmarus.KB229312.1                           C 0 I 1
s Odocoileus_virginianus.KZ100018.1                         147953 11 +    630418 TG-T--G----TAT----------------TTGT
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          82337 15 -    150152 tg-t--gtgtttat-t-tg--------------t
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    84292  6 +    102263 AC-T--A------T-------------------T
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2785117 13 -  10937097 tg-t--gt-tt-at-t-tg--------------t
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       466156  9 -    559221 tg-t--a------t-t-t--------------at
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 1
s Ovis_aries.CM001607.2                                   17590786 15 +  44047080 tg-t--gtgtttat-t-tg--------------t
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      178937 15 -    191736 TG-T--GTGTTTAT----------------TTGT
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    48603  6 +     80009 tt-t--a------t-------------------t
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189147471  6 + 189151597 tt-t--a------t-------------------t
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  154227  9 +    230217 TG-T--G------T----------------TTGT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 1
s Panthera_pardus.KV860321.1                                267543  9 +  18783137 tg-t--g------t-t-tg--------------t
i Panthera_pardus.KV860321.1                             C 0 I 1
s Panthera_tigris.KE722367.1                               4724363  9 -   8748460 tg-t--g------t-t-tg--------------t
i Panthera_tigris.KE722367.1                             C 0 I 1
s Pantholops_hodgsonii.KE114653.1                          1269667 15 -   2937107 tg-t--gtgtttat-t-tg--------------t
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183448524  9 + 183742232 TT-C--A------T----------------GACT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            12073  6 +     20448 TT-C--A------T-------------------T
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20568884  6 +  20919399 TT-C--A------T-------------------T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                  10830  6 +     41871 TT-C--A------T-------------------T
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    14108  6 +     27711 TT-C--A------T-------------------T
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  5107  6 -     11374 TT-C--A------T-------------------T
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15649  9 -     78924 TG-T--G------T----------------TTAT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 1
s Peromyscus_maniculatus.KI615324.1                       18215034  6 -  18517816 AC-T--A------T-------------------T
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_231924                     1010  6 -      1962 TG-T--G------G-------------------T
i Petromus_typicus.PetTyp_scaffold_231924                I 159 n 68
s Phocoena_phocoena.PhoPho_flattened_line_24159              12188 13 +     63832 TG-T--G--TTTAT----------------TTGT
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            3469  6 +     68526 TT-T--A------T-------------------T
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        43607  6 +     89929 TT-T--A------T-------------------T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            45023  6 +     51399 TT-T--A------T-------------------T
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14301259  6 -  14605196 tt-t--a------t-------------------t
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             5359 13 +     22620 AG-T--G--TGTTT----------------TTCa
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 234
s Pithecia_albicans.k141_1476471                              6998  3 +     26961 TT-T------------------------------
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          3125  3 +     23417 TT-T------------------------------
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                6990  3 +     29694 TT-T------------------------------
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          32016  3 +     52772 TT-T------------------------------
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           7012  3 +     26198 TT-T------------------------------
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3943542  3 +   4542175 TT-T------------------------------
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            6976  3 -     23490 TT-T------------------------------
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610           1728 13 +      7680 TG-T--G--TTTAT----------------TTGT
i Platanista_gangetica.PlaMin_flattened_line_173610      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       11239  3 -     39866 TT-T------------------------------
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        20402  3 +     34906 TT-T------------------------------
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       24664  3 +     87950 TT-T------------------------------
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     25491  3 +     88961 TT-T------------------------------
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         11161  3 +     39403 TT-T------------------------------
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          24944  3 -     87928 TT-T------------------------------
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         31906  3 +     60166 TT-T------------------------------
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      32102  3 +     67232 TT-T------------------------------
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          27575  3 +     90634 TT-T------------------------------
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          24948  3 -     89403 TT-T------------------------------
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189136391  6 + 189387572 tt-t--a------t-------------------t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9576001  6 +   9816681 TT-T--A------T-------------------T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               78547  6 -     81375 TT-T--A------T-------------------T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                             10383  6 +     19060 TT-T--A------T-------------------T
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            15056  6 -     21651 Ac-t--a------t-------------------t
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            17817 25 -     21811 tg-t--g------tgtgtgtgtgtgtgtgtgtgt
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteropus_alecto.KB030862.1                              22987226 12 +  28871421 tg-t--t------t-t-t-t-aat---------t
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1370786 12 +   4952924 tg-t--t------t-t-t-t-aat---------t
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20277430  9 -  38429054 tg-t--g------t-t-tg--------------t
i Puma_concolor.QAVW01001104.1                           C 0 I 1
s Pygathrix_cinerea.k141_1153803                             20360  6 -     91421 TT-T--A------T-------------------T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7614485  6 +   7812017 TT-T--A------T-------------------T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             20390  6 -     72585 TT-T--A------T-------------------T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  9791 11 +     55207 TG-T--G----TAT----------------TTGT
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53574447  5 +  90668790 AT-T--A------T--------------------
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        369998 12 -   3329780 tg-t--t------tct-t-tat-----------t
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_1041714                             953  6 +      5697 TT-T--A------T-------------------T
i Rhinopithecus_bieti.k119_1041714                       C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91241426  6 - 195417433 tt-t--a------t-------------------t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7677074  6 +   7961872 TT-T--A------T-------------------T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_301684                  58 12 +       280 TG-T--T------T-------------TTTATTT
i Rousettus_aegyptiacus.RouAeg_scaffold_301684           C 0 C 0
s Saguinus_bicolor.k141_8081                                  2719  3 +     42994 TT-T------------------------------
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                             1394  3 +      2253 TT-T------------------------------
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               1842  3 -      8737 TT-T------------------------------
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                              1474  3 +      2343 TT-T------------------------------
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209476376  3 + 209938924 TT-T------------------------------
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                 801  3 -      7576 TT-T------------------------------
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_133311                       2243 15 +      9503 TG-T--GTGTTTAT----------------TTGT
i Saiga_tatarica.SaiTat_scaffold_133311                  C 0 I 1
s Saimiri_boliviensis.NW_024100920.1                     119952436  3 - 121099817 TT-T------------------------------
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24778  3 +     46362 TT-T------------------------------
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               24873  3 +     45824 TT-T------------------------------
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             41552  3 -     64574 TT-T------------------------------
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4625  3 -     23631 TT-T------------------------------
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 24769  3 -     61129 TT-T------------------------------
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5422109  3 -   5703754 TT-T------------------------------
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          57350  3 -     80660 TT-T------------------------------
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    156186 12 -    313613 tatatat------a-tg---------------ct
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 58 C 0
s Semnopithecus_entellus.k141_1672505                         5219  6 -     12572 TT-T--A------T-------------------T
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      32072  6 +     39453 TT-T--A------T-------------------T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           12576  6 +     27826 TT-T--A------T-------------------T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            12122  6 -     19483 TT-T--A------T-------------------T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      5418  6 -     12762 TT-T--A------T-------------------T
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           5261  6 +     13763 TT-T--A------T-------------------T
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     4119  6 -     30804 ac-t--a------t-------------------t
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1957164  6 -   3870691 tt-t--g------t-------------------t
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              21673  9 -    196729 TG-T--G------T----------------TTAT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 1
s Sus_scrofa.CM000828.4                                    6814767  9 +  69701581 TG-T--G------T----------------TTAT
i Sus_scrofa.CM000828.4                                  C 0 I 1
s Tadarida_brasiliensis.TadBra_scaffold_25820                14353  9 +     41958 TG-T--G------T----------------GTGT
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      122001 14 -    156842 TG-T--G------T-----------TTATTTATT
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    390480 14 +    539355 TG-T--G------T-----------TTATTTATT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               29112  6 +     70052 TT-T--A------T-------------------T
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                3908  6 -     16117 TG-T--A------T-------------------T
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186433735  6 + 186847797 TT-C--A------T-------------------T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              107841  4 +    114563 TG-T--A---------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 218 C 0
s Tolypeutes_matacus.TolMat_scaffold_85600                    5505 10 +     18632 TG-C--T------G---------------AGTGC
i Tolypeutes_matacus.TolMat_scaffold_85600               C 0 C 0
s Trachypithecus_auratus.k141_722599                         16158  6 -     20410 TT-T--A------T-------------------T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      5278  6 -     12674 TT-T--A------T-------------------T
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       16266  6 +     19930 TT-T--A------T-------------------T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      12666  6 -     19997 TT-T--A------T-------------------T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            52809  6 -     60166 TT-T--A------T-------------------T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        20272  6 -     27529 TT-T--A------T-------------------T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                       1900  6 +      9229 TT-T--A------T-------------------T
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          13799  6 -     21137 TT-T--A------T-------------------T
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                    1904  6 +      9131 TT-T--A------T-------------------T
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                         1863  6 -      3730 TT-T--A------T-------------------T
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        30132  6 +     32220 TT-T--A------T-------------------T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5944230  6 +   6242583 TT-T--A------T-------------------T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       13487  6 +     20839 TT-T--A------T-------------------T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    3667 14 +     27266 TG-T--G-GTTTTT----------------TTAT
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tupaia_chinensis.KB320699.1                              2166001  6 +   4065304 tt-t--a------t-------------------t
i Tupaia_chinensis.KB320699.1                            C 0 I 293
s Tupaia_tana.TupTan_flattened_line_394                       2658  6 +     70247 TT-T--A------T-------------------T
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15741373  4 +  33153633 TG-T--G---------------------------
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 5
s Uropsilus_gracilis.UroGra_scaffold_12083                   56273 11 -     77625 TG-TTAT------T----------------TCAT
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4852765  9 -   5085361 tg-t--g------t-t-t--------------at
i Ursus_maritimus.KK499267.1                             C 0 I 1
s Vulpes_lagopus.VulLag_flattened_line_30954                 14270  9 -     43706 TG-T--A------T----------------TTAT
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 1
s Xerus_inauris.XerIna_scaffold_2302                          4198  6 +    224448 TT-T--A------T-------------------T
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      17534  6 +     63895 TT-T--G------T-------------------T
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_1424488              5 13 -       542 TG-T--G--TTTAT----------------TTGT
i Ziphius_cavirostris.ZipCav_flattened_line_1424488      C 0 C 0
e Cheracebus_torquatus.k141_1170026                          64344 81 +     76511 I
e Cheracebus_regulus.k141_471822                            159875 81 -    216457 I
e Cheracebus_lugens.k141_1393925                              2308 81 +     17877 I
e Cheracebus_lucifer.k141_49986                               2432 81 -     17098 I
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vicugna_pacos.KN270157.1                                 5374276 47 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tonatia_saurophila.TonSau_scaffold_294                     83346 714 +    610378 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             33151 10 +     97271 I
e Sorex_araneus.JH798187.1                                13653314 9235 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Pteronura_brasiliensis.PteBra_flattened_line_76658           895 10 -      3818 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                       107181400  0 - 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Ondatra_zibethicus.OndZib_scaffold_7387                      632 3336 +    140218 I
e Octodon_degus.JH651603.1                                  750513 17 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Mustela_putorius.JH418006.1                               304037 10 -  14710649 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                18000 920 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184766 1004 -  29670104 I
e Mellivora_capensis.MelCap_flattened_line_69365             12726 10 +     13704 I
e Manis_pentadactyla.KN006162.1                              53022 987 -    317179 I
e Manis_javanica.JSZB01003497.1                              20877 990 +    737560 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     5119  0 +     14121 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20664195 469 +  22651954 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Enhydra_lutris.KZ291758.1                               16338962 10 -  41312741 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    39057 4687 +     67921 I
e Desmodus_rotundus.KZ672289.1                             8632254 708 +  20541912 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Crocidura_indochinensis.CroInd_scaffold_37019               6144 44 -     19598 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1255607 4808 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Carollia_perspicillata.CarPer_scaffold_92756                7250 707 -     11696 I
e Camelus_ferus.KB017975.1                                  405530 47 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2337232 47 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10004760 47 -  17673402 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6909 705 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Anoura_caudifer.AnoCau_scaffold_1412                      187499 706 +    412891 I
e Ailurus_fulgens.LNAC01001112.1                             81934 10 -    347723 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     74500  2 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      11261 1 +     62944 T
s Acinonyx_jubatus.LLWD01001279.1                           830404 1 -   1699592 t
i Acinonyx_jubatus.LLWD01001279.1                        I 1 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     74502 1 +     87051 T
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 2 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9512972 1 -  29979442 t
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 1 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     76069 1 -     89534 T
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   19862 1 -     52922 T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         19793 1 -     28001 T
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                         10287 1 -     18505 T
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                          11145 1 -     12518 T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303              1952 1 -     32520 T
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      15721 1 +     20879 T
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15195015 1 +  23207421 t
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         5480 1 -     18090 t
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Bison_bison.KN261452.1                                    204397 1 -    288883 t
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20277634 1 +  48749331 t
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1130188 1 -   1948126 t
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18088272 1 +  45695690 t
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2824224 1 +   4408762 t
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s CanFam4.chr16                                           17802665 1 -  60362399 T
i CanFam4.chr16                                          I 1 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     3411 1 -     43241 T
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 1 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9038106 1 -   9314153 t
i Canis_lupus_dingo.QKWQ01000480.1                       I 1 C 0
s Canis_lupus_familiaris.chr16                            17962582 1 -  59632846 t
i Canis_lupus_familiaris.chr16                           I 1 C 0
s Canis_lupus_orion.HG994398.1                            18503879 1 +  63665305 t
i Canis_lupus_orion.HG994398.1                           I 1 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    3398 1 -     12242 C
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 19
s Carlito_syrichta.NW_007259797.1                           158621 1 -    496798 t
i Carlito_syrichta.NW_007259797.1                        I 1 I 4
s Castor_canadensis.CasCan_scaffold_2074                    140169 1 +    179628 T
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     97180 1 +    217609 T
i Catagonus_wagneri.CatWag_scaffold_2839                 I 1 C 0
s Cavia_aperea.AVPZ01000300.1                             18351955 1 -  23392119 t
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18364215 1 -  23407841 t
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                       103097 1 +    143979 T
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         8424 1 +     31688 T
i Cephalopachus_bancanus.k141_1423433                    I 1 I 4
s Ceratotherium_simum.JH767749.1                          12234699 1 +  27778364 t
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5722 1 -     25243 T
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4480810 1 +   4669795 t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        5311 1 +     17872 T
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           5899 1 -     14043 T
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          13998 1 +     27781 T
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        14158 1 -     20310 T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          17131 1 +     29689 T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           11890 1 -     20078 T
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          19804 1 -     27936 T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            8677 1 -     17152 T
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38828404 1 +  39242232 T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21227909 1 -  21565898 T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       45021 1 -     53127 T
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        5282 1 +     13442 T
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       19824 1 -     27947 T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         2852 1 +     10558 T
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          5855 1 +     14005 T
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            7429 1 -      8501 T
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Chlorocebus_aethiops.ctg25                              18433727 1 -  18827391 T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       20223 1 -     50209 T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135427229 1 + 135778131 t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1915765 1 +   2368649 t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199954006 1 + 200372422 T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              42315 1 +     84244 T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17552115 1 -  53390261 t
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           3952 1 +     23735 T
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 53729 1 +     63868 T
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11669497 1 + 224834208 T
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             31599 1 -     87169 T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 1 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    839091 1 +   1526836 T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  38322 1 +     51376 C
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 19
s Dasyprocta_punctata.DasPun_flattened_line_15900             2159 1 -     75252 T
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 15
s Dasypus_novemcinctus.JH564415.1                            70421 1 +   2246927 T
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16814890 1 +  35494412 t
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  676541 1 +   1390856 t
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    9301 1 +    198055 T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 35674 1 -     42551 T
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE797349.1                                    791 1 -     31197 t
i Eidolon_helvum.KE797349.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       315158 1 +    607251 T
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          24837 1 -    110024 T
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                            4768 1 +      8657 T
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2150592 1 -  14770903 g
i Eptesicus_fuscus.JH977646.1                            C 0 I 232
s Equus_asinus.JREZ01000139.1                              1286834 1 +   4378816 t
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18534643 1 -  39960074 t
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               36672 1 +    498745 t
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21210399 1 -  21539334 T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           14317 1 +    133382 T
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             28266 1 -     44125 T
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20240180 1 + 206538554 t
i Felis_catus.CM001381.2                                 I 1 C 0
s Felis_catus_fca126.CM031415.1                           20199052 1 + 205367284 t
i Felis_catus_fca126.CM031415.1                          I 1 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 12712 1 -     36744 T
i Felis_nigripes.FelNig_flattened_line_20823             I 1 C 0
s Fukomys_damarensis.KN121974.1                             852748 1 +   3816255 t
i Fukomys_damarensis.KN121974.1                          C 0 I 18
s Galeopterus_variegatus.GalVar_scaffold_108840               5786 1 -      9135 T
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     612406 1 -    660261 T
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            35276 1 +     49224 T
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              20487 1 -     32273 T
i Gorilla_beringei.k141_3596273                          C 0 I 17
s Gorilla_gorilla.LT578341.1                             186342623 1 + 186649187 t
i Gorilla_gorilla.LT578341.1                             C 0 I 16
s Graphiurus_murinus.GraMur_scaffold_10447                   37131 1 +     78134 T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               245415 1 +    327341 T
i Helogale_parvula.HelPar_flattened_line_2585            I 1 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               113749 1 +    128679 T
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       113547 1 +   1711038 t
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188               2113 1 +      9903 T
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 C 0
s Hoolock_leuconedys.ctg274                                    440074 1 +    630532 T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  48382 1 +     55795 T
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 1 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            27068 1 -    143317 A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      85237 1 +    135385 T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7525286 1 -   7955117 t
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                2097 1 -     31341 T
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8278818 1 -   9596543 T
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                 1836 1 -     18011 T
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_50988                    19069 1 +     29960 g
i Lasiurus_borealis.LasBor_scaffold_50988                C 0 I 51
s Leptonychotes_weddellii.KB714746.1                       3045228 1 +   3914936 t
i Leptonychotes_weddellii.KB714746.1                     I 1 C 0
s Lipotes_vexillifer.KE559953.1                             271369 1 -    662738 t
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1442359 1 +   1826925 T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17958822 1 -  59628241 t
i Lycaon_pictus.CM007581.1                               I 1 C 0
s Macaca_arctoides.k141_2326796                              12170 1 +     40492 T
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59681420 1 +  60120075 T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 17966 1 -     26193 T
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            85741 1 -    114318 T
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 11432 1 -     23192 T
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                20897 1 -     29190 T
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  29476 1 +     37952 T
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186844549 1 + 187317192 t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25463130 1 -  25927173 t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  85334 1 +     89720 T
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                12346 1 +     20474 T
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  12120 1 -     14993 T
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  334983 1 -    668171 T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                10410 1 -     24072 T
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               31041 1 -     45290 T
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                  5835 1 +    270270 T
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23942632 1 -  24302211 T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356740 1 +    752769 T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33106369 1 -  40650429 t
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        16397 1 -    207569 T
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 37424 1 +    140813 T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    6529 1 +     10310 T
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1853581 1 +   8254450 t
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 6
s Miopithecus_ogouensis.k141_534055                          14307 1 -     28506 T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         8096 1 -      8324 t
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 1 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    30274 1 -    437263 T
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 144299 1 -    366855 C
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   4588 1 +     82753 C
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_40893                     416 1 +      5729 T
i Mungos_mungo.MunMun_flattened_line_40893               I 1 I 17
s Mus_caroli.LT608237.1                                   84365018 1 - 120012414 T
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87654422 1 - 129401213 T
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31359125 1 -  89631738 T
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90757209 1 - 130317789 T
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              8759 1 +     14296 T
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     73578 1 -     80779 T
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 I 19
s Myotis_brandtii.KE162005.1                                284304 1 -  10118263 g
i Myotis_brandtii.KE162005.1                             C 0 I 1
s Myotis_davidii.KB100139.1                                1591622 1 -   6019432 g
i Myotis_davidii.KB100139.1                              C 0 I 1
s Myotis_lucifugus.GL429869.1                              3907723 1 -   4330536 g
i Myotis_lucifugus.GL429869.1                            C 0 I 1
s Myotis_myotis.MyoMyo_scaffold_44643                         2279 1 +     25416 g
i Myotis_myotis.MyoMyo_scaffold_44643                    C 0 I 1
s Nannospalax_galili.KL204047.1                            2039988 1 -   3037898 t
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               20372 1 +     21681 T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20309684 1 +  31847680 t
i Neomonachus_schauinslandi.NINY01007730.1               I 1 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5869239 1 +   7148211 t
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    760519 1 +    783361 G
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9152739 1 -   9404916 t
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 1 C 0
s Ochotona_princeps.JH802162.1                             1367984 1 +   3988456 C
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              508830 1 -   2017862 t
i Odobenus_rosmarus.KB229312.1                           I 1 C 0
s Odocoileus_virginianus.KZ100018.1                         147964 1 +    630418 T
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          82352 1 -    150152 t
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    84298 1 +    102263 T
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2785130 1 -  10937097 t
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       466166 1 -    559221 t
i Otocyon_megalotis.JAEUCK010005147.1                    I 1 C 0
s Pan_paniscus.KQ411613.1                                    48609 1 +     80009 t
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189147477 1 + 189151597 t
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  154237 1 +    230217 T
i Panthera_onca.PanOnc_flattened_line_3271               I 1 C 0
s Panthera_pardus.KV860321.1                                267553 1 +  18783137 t
i Panthera_pardus.KV860321.1                             I 1 C 0
s Panthera_tigris.KE722367.1                               4724373 1 -   8748460 t
i Panthera_tigris.KE722367.1                             I 1 C 0
s Papio_anubis.CM001495.2                                183448533 1 + 183742232 T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            12079 1 +     20448 T
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20568890 1 +  20919399 T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                  10836 1 +     41871 T
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    14114 1 +     27711 T
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  5113 1 -     11374 T
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15659 1 -     78924 T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 1 C 0
s Peromyscus_maniculatus.KI615324.1                       18215040 1 -  18517816 T
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_221660                     1021 1 -      2102 T
i Petromus_typicus.PetTyp_scaffold_221660                I 68 I 18
s Phocoena_phocoena.PhoPho_flattened_line_24159              12201 1 +     63832 T
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            3475 1 +     68526 T
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        43613 1 +     89929 T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            45029 1 +     51399 T
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14301265 1 -  14605196 t
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610           1741 1 +      7680 T
i Platanista_gangetica.PlaMin_flattened_line_173610      C 0 C 0
s Pongo_abelii.CM009266.2                                189136397 1 + 189387572 t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9576007 1 +   9816681 T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               78553 1 -     81375 T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                             10389 1 +     19060 T
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            15062 1 -     21651 t
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            17842 1 -     21811 g
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteropus_alecto.KB030862.1                              22987238 1 +  28871421 t
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1370798 1 +   4952924 t
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20277440 1 -  38429054 t
i Puma_concolor.QAVW01001104.1                           I 1 C 0
s Pygathrix_cinerea.k141_1153803                             20366 1 -     91421 T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7614491 1 +   7812017 T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             20396 1 -     72585 T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  9802 1 +     55207 T
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53574452 1 +  90668790 A
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        370010 1 -   3329780 t
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_1041714                             959 1 +      5697 T
i Rhinopithecus_bieti.k119_1041714                       C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91241432 1 - 195417433 t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7677080 1 +   7961872 T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_301684                  70 1 +       280 T
i Rousettus_aegyptiacus.RouAeg_scaffold_301684           C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    156198 1 -    313613 t
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                         5225 1 -     12572 T
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      32078 1 +     39453 T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           12582 1 +     27826 T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            12128 1 -     19483 T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      5424 1 -     12762 T
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           5267 1 +     13763 T
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     4125 1 -     30804 t
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1957170 1 -   3870691 t
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              21683 1 -    196729 T
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 C 0
s Sus_scrofa.CM000828.4                                    6814777 1 +  69701581 T
i Sus_scrofa.CM000828.4                                  I 1 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                14362 1 +     41958 G
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 4
s Tapirus_indicus.TapInd_scaffold_9301                      122015 1 -    156842 T
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    390494 1 +    539355 T
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               29118 1 +     70052 T
i Tarsius_lariang.k141_2201908                           C 0 I 4
s Tarsius_wallacei.k141_254427                                3914 1 -     16117 T
i Tarsius_wallacei.k141_254427                           C 0 I 4
s Theropithecus_gelada.CM009954.1                        186433741 1 + 186847797 T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              107845 1 +    114563 G
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 18
s Tolypeutes_matacus.TolMat_scaffold_85600                    5515 1 +     18632 T
i Tolypeutes_matacus.TolMat_scaffold_85600               C 0 C 0
s Trachypithecus_auratus.k141_722599                         16164 1 -     20410 T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      5284 1 -     12674 T
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       16272 1 +     19930 T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      12672 1 -     19997 T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            52815 1 -     60166 T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        20278 1 -     27529 T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                       1906 1 +      9229 T
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          13805 1 -     21137 T
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                    1910 1 +      9131 T
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                         1869 1 -      3730 T
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        30138 1 +     32220 T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5944236 1 +   6242583 T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       13493 1 +     20839 T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    3681 1 +     27266 T
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tupaia_chinensis.KB320699.1                              2166300 1 +   4065304 t
i Tupaia_chinensis.KB320699.1                            I 293 C 0
s Tupaia_tana.TupTan_flattened_line_394                       2664 1 +     70247 T
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15741382 1 +  33153633 T
i Tursiops_truncatus.MRVK01000835.1                      I 5 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   56284 1 -     77625 T
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4852775 1 -   5085361 t
i Ursus_maritimus.KK499267.1                             I 1 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 14280 1 -     43706 T
i Vulpes_lagopus.VulLag_flattened_line_30954             I 1 C 0
s Xerus_inauris.XerIna_scaffold_2302                          4204 1 +    224448 T
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      17540 1 +     63895 T
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_1424488             18 1 -       542 T
i Ziphius_cavirostris.ZipCav_flattened_line_1424488      C 0 C 0
e Cheracebus_torquatus.k141_1170026                          64344 81 +     76511 I
e Cheracebus_regulus.k141_471822                            159875 81 -    216457 I
e Cheracebus_lugens.k141_1393925                              2308 81 +     17877 I
e Cheracebus_lucifer.k141_49986                               2432 81 -     17098 I
e Plecturocebus_moloch.k141_1031110                          24951 0 -     89403 C
e Plecturocebus_miltoni.k141_349282                          27578 0 +     90634 C
e Plecturocebus_hoffmannsi.k141_3303950                      32105 0 +     67232 C
e Plecturocebus_grovesi.k141_2013005                         31909 0 +     60166 C
e Plecturocebus_dubius.k141_1058799                          24947 0 -     87928 C
e Plecturocebus_cupreus.k141_2351393                         11164 0 +     39403 C
e Plecturocebus_cinerascens.k141_1164729                     25494 0 +     88961 C
e Plecturocebus_caligatus.k141_1382851                       24667 0 +     87950 C
e Plecturocebus_brunneus.k141_1495506                        20405 0 +     34906 C
e Plecturocebus_bernhardi.k141_2549090                       11242 0 -     39866 C
e Pithecia_vanzolinii.k141_1697688                            6979 0 -     23490 C
e Pithecia_pithecia.tarseq_165                             3943545 0 +   4542175 C
e Pithecia_pissinattii.k141_1824269                           7015 0 +     26198 C
e Pithecia_mittermeieri.k141_446740                          32019 0 +     52772 C
e Pithecia_hirsuta.k141_305604                                6993 0 +     29694 C
e Pithecia_chrysocephala.k141_839575                          3128 0 +     23417 C
e Pithecia_albicans.k141_1476471                              7001 0 +     26961 C
e Lagothrix_lagothricha.k141_1005387                         17779 0 -     38430 C
e Chiropotes_sagulatus.k141_1421488                          33536 0 -     50570 C
e Chiropotes_israelita.k141_747660                          101729 0 +    146308 C
e Cacajao_melanocephalus.k141_619699                         57386 0 -    119600 C
e Cacajao_hosomi.k141_81245                                  33286 0 -     95584 C
e Cacajao_calvus.k141_5142                                   64104 0 +     81800 C
e Cacajao_ayresi.k141_552049                                104601 0 -    122966 C
e Ateles_paniscus.k141_457735                                23606 0 +     72325 C
e Ateles_marginatus.k141_803263                              15718 0 -     40414 C
e Ateles_geoffroyi_a.k141_833924                               11336 0 -     89868 C
e Ateles_chamek.k141_1806455                                 29561 0 -     30947 C
e Ateles_belzebuth.k141_445860                               46760 0 -     48001 C
e Ateles_geoffroyi_b.tarseq_1536                             21211961 0 -  21539123 C
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202 0 +      8798 C
e Galago_senegalensis.k141_631886                             7400 0 +     11339 C
e Galago_moholi.ctg2040                                     429710 0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57353 0 -     80660 C
e Sapajus_apella.ctg103                                    5422112 0 -   5703754 C
e Saimiri_ustus.k141_1484609                                 24772 0 -     61129 C
e Saimiri_sciureus.k141_2278166                               4628 0 -     23631 C
e Saimiri_oerstedii.k141_1487881                             41555 0 -     64574 C
e Saimiri_macrodon.k141_716185                               24876 0 +     45824 C
e Saimiri_cassiquiarensis.k141_2188234                       24781 0 +     46362 C
e Saimiri_boliviensis.NW_024100920.1                     119952439 0 - 121099817 C
e Saguinus_mystax.k141_4699220                                 804 0 -      7576 C
e Saguinus_midas.LG03                                    209476379 0 + 209938924 C
e Saguinus_labiatus.k141_4004060                              1477 0 +      2343 C
e Saguinus_inustus.k141_3945547                               1845 0 -      8737 C
e Saguinus_imperator.k141_1496743                             1397 0 +      2253 C
e Saguinus_bicolor.k141_8081                                  2722 0 +     42994 C
e Mico_schneideri.k141_916733                                        673 0 +      5107 C
e Mico_humeralifer.k141_1346949                               1086 0 +      1399 C
e Mico_argentatus.k141_1024458                                 673 0 -     20047 C
e Leontopithecus_rosalia.k141_464620                         27761 0 +     66356 C
e Leontopithecus_chrysomelas.k141_1519602                    31057 0 +     38576 C
e Leontocebus_nigricollis.k141_4610752                        9441 0 +     35603 C
e Leontocebus_illigeri.k141_1304848                           1754 0 -     35062 C
e Leontocebus_fuscicollis.k141_1820339                        9412 0 +     64341 C
e Chiropotes_albinasus.k141_2206961                           2457 0 -     15524 C
e Cebus_unicolor.k141_1837183                                 1821 0 +     14051 C
e Cebus_olivaceus.k141_1764483                                2092 0 +     28840 C
e Cebus_albifrons.Contig27                                25654154 0 +  26074798 C
e Cebuella_pygmaea.k141_793006                                 674 0 -     15088 C
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1648 0 -     12329 C
e Callithrix_jacchus.pat_scaffold_3                       23592834 0 - 189096842 C
e Callithrix_geoffroyi.k119_69176                              973 0 +      5377 C
e Callimico_goeldii.k141_737284                                678 0 -     31217 C
e Callibella_humilis.k141_10318                               1037 0 +     27907 C
e Aotus_vociferans.k141_344750                               30433 0 -     47192 C
e Aotus_trivirgatus.k141_2152450                             17309 0 -     34685 C
e Aotus_nancymaae.KZ198451.1                               4299700 0 -   5030052 C
e Aotus_griseimembra.k141_2240599                            17273 0 -     34016 C
e Aotus_azarae.k141_3104676                                  17275 0 -     33861 C
e Alouatta_seniculus.k141_117119                             18734 0 +     50774 C
e Alouatta_puruensis.k141_362188                              4283 0 +      5663 C
e Alouatta_palliata.k141_2135620                              7782 0 +     47717 C
e Alouatta_nigerrima.k141_1929159                             3561 0 +     30492 C
e Alouatta_macconnelli.k141_918386                            4603 0 -      9457 C
e Alouatta_juara.k141_1302312                                 3515 0 +     27940 C
e Alouatta_discolor.k141_566626                              15042 0 +     28687 C
e Alouatta_caraya.k141_1701091                                4590 0 -     36483 C
e Alouatta_belzebul.k141_3560514                             11479 0 +     51355 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445 0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734 0 -     33856 C
e Perodicticus_potto.k141_1186926                              597 0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219 0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vicugna_pacos.KN270157.1                                 5374276 47 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tonatia_saurophila.TonSau_scaffold_294                     83346 714 +    610378 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             33151 10 +     97271 I
e Sorex_araneus.JH798187.1                                13653314 9235 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Saiga_tatarica.SaiTat_scaffold_133311                       2258 1 +      9503 I
e Pteronura_brasiliensis.PteBra_flattened_line_76658           895 10 -      3818 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             5372 234 +     22620 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Pantholops_hodgsonii.KE114653.1                          1269682 0 -   2937107 C
e Ovis_canadensis.OviCan_scaffold_2572                      178952 0 -    191736 C
e Ovis_aries.CM001607.2                                   17590801 0 +  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107181400 0 - 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Ondatra_zibethicus.OndZib_scaffold_7387                      632 3336 +    140218 I
e Octodon_degus.JH651603.1                                  750513 17 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869 0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414 0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947 0 - 196305487 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Mustela_putorius.JH418006.1                               304037 10 -  14710649 I
e Murina_feae.MurFea_scaffold_85699                          10536 11 +     14753 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             37261 5 +     64694 I
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                18000 920 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184766 1004 -  29670104 I
e Mellivora_capensis.MelCap_flattened_line_69365             12726 10 +     13704 I
e Manis_pentadactyla.KN006162.1                              53022 987 -    317179 I
e Manis_javanica.JSZB01003497.1                              20877 990 +    737560 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     5119 0 +     14121 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20664195 469 +  22651954 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 23002 0 +     36099 C
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689 0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Enhydra_lutris.KZ291758.1                               16338962 10 -  41312741 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    39057 4687 +     67921 I
e Desmodus_rotundus.KZ672289.1                             8632254 708 +  20541912 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Crocidura_indochinensis.CroInd_scaffold_37019               6144 44 -     19598 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1255607 4808 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Carollia_perspicillata.CarPer_scaffold_92756                7250 707 -     11696 I
e Capra_hircus.CM004588.1                                 18065514 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18834713 0 +  46296322 C
e Camelus_ferus.KB017975.1                                  405530 47 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2337232 47 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10004760 47 -  17673402 I
e Beatragus_hunteri.BeaHun_scaffold_50177                    31762 1 +     34529 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6909 705 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         538 0 +      5281 C
e Anoura_caudifer.AnoCau_scaffold_1412                      187499 706 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          680683 0 -   2318259 C
e Ailurus_fulgens.LNAC01001112.1                             81934 10 -    347723 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      11262 17 +     62944 A---AATT---TTGCTCT--------------------------TT-A--TG
s Acinonyx_jubatus.LLWD01001279.1                           830405 17 -   1699592 a---aatt---ttgctct--------------------------tt-a--ca
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     74503 17 +     87051 A---AGTG---TTGCTCT--------------------------TT-A--GT
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 1
s Ailuropoda_melanoleuca.LNAT01000098.1                    9512973 12 -  29979442 a---aatt---ttgctct----------------------------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 3
s Allactaga_bullata.AllBul_scaffold_9566                     76070 17 -     89534 A---AGTT---TCATTTT--------------------------TT-A--TA
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   19863 17 -     52922 A---AATT---TTGCTCT--------------------------TT-A--TG
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         19794 17 -     28001 A---AATT---TTACTCT--------------------------TT-A--TG
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                         10288 17 -     18505 A---AATT---TTACTCT--------------------------TT-A--TG
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                          11146 17 -     12518 A---AATT---TTGCTCT--------------------------TT-A--TG
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             11479 17 +     51355 A---AATT---TTGCTCT--------------------------TT-A--TG
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                4590 17 -     36483 A---AATT---TTGCTCT--------------------------TT-A--TG
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              15042 17 +     28687 A---AATT---TTGCTCT--------------------------TT-A--TG
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 3515 17 +     27940 A---AATT---TTGCTCT--------------------------TT-A--TG
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            4603 17 -      9457 A---AATT---TTGCTCT--------------------------TT-A--TG
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             3561 17 +     30492 A---AATT---TTGCTCT--------------------------TT-A--TG
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              7782 17 +     47717 A---AATT---TTGCTCT--------------------------TT-A--TG
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              4283 17 +      5663 A---AATT---TTGCTCT--------------------------TT-A--TG
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             18734 17 +     50774 A---AATT---TTGCTCT--------------------------TT-A--TG
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          680683 17 -   2318259 t---aAAT---TTGGTCT--------------------------TT-A--TA
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303              1953 17 -     32520 T---AAAT---TTGGTCT--------------------------TT-A--TA
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 C 0
s Aotus_azarae.k141_3104676                                  17275 17 -     33861 A---AATT---TTGCTCT--------------------------TT-A--TG
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            17273 17 -     34016 A---AATT---TTGCTCT--------------------------TT-A--TG
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299700 17 -   5030052 A---AATT---Ttgctct--------------------------tt-a--tg
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             17309 17 -     34685 A---AATT---TTGCTCT--------------------------TT-A--TG
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               30433 17 -     47192 A---AATT---TTGCTCT--------------------------TT-A--TG
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      15722 15 +     20879 -----GTT---TTGCTCT--------------------------CT-A--CA
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21211961 17 -  21539123 A---AATT---TTGCCCT--------------------------TT-A--TG
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               46760 17 -     48001 A---AATT---TTGCCCT--------------------------TT-A--TG
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 29561 17 -     30947 A---AATT---TTGCCCT--------------------------TT-A--TG
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               11336 17 -     89868 A---AATT---TTGCCCT--------------------------TT-A--TG
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              15718 17 -     40414 A---AATT---TTGCCCT--------------------------TT-A--TG
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                23606 17 +     72325 A---AATT---TTGCCCT--------------------------TT-A--TG
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15195016 17 +  23207421 t---acat---ttgctct--------------------------tt-a--ta
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         5481 17 -     18090 t---acat---ttgctct--------------------------tt-a--ta
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    31763 17 +     34529 T---AAAT---TCGGTCT--------------------------TT-A--TA
i Beatragus_hunteri.BeaHun_scaffold_50177                I 1 C 0
s Bison_bison.KN261452.1                                    204398 17 -    288883 t---aaat---ctggtct--------------------------tt-a--ta
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20277635 17 +  48749331 t---aaat---ctggtct--------------------------tt-a--ta
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1130189 17 -   1948126 t---aaat---ctggtct--------------------------tt-a--ta
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18088273 17 +  45695690 t---aaat---ctggtct--------------------------tt-a--ta
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2824225 17 +   4408762 t---aaat---ctggtct--------------------------tt-a--ta
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                104601 17 -    122966 A---AATT---TTGCTCT--------------------------TT-A--TG
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   64104 17 +     81800 A---AATT---TTGCTCT--------------------------TT-A--TG
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  33286 17 -     95584 A---AATT---TTGCTCT--------------------------TT-A--TG
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         57386 17 -    119600 A---AATT---TTGCTCT--------------------------TT-A--TG
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_10318                               1037 17 +     27907 A---AACT---TTTCTCT--------------------------TT-A--TG
i Callibella_humilis.k141_10318                          C 0 C 0
s Callimico_goeldii.k141_737284                                678 17 -     31217 A---AACT---TTGTTCT--------------------------TT-A--TG
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                              973 17 +      5377 A---AACT---TTGCTCT--------------------------TT-A--TG
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592834 17 - 189096842 A---AACT---TTGCTCT--------------------------TT-A--TG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1648 17 -     12329 A---AACT---TTGCTCT--------------------------TT-A--TG
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s CanFam4.chr16                                           17802666 12 -  60362399 A---AATA---TTGCTCT----------------------------------
i CanFam4.chr16                                          C 0 I 3
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     3412 12 -     43241 A---AATA---TTGCTCT----------------------------------
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 I 3
s Canis_lupus_dingo.QKWQ01000480.1                         9038107 12 -   9314153 a---aata---ttgctcT----------------------------------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 3
s Canis_lupus_familiaris.chr16                            17962583 12 -  59632846 a---aata---ttgctcT----------------------------------
i Canis_lupus_familiaris.chr16                           C 0 I 3
s Canis_lupus_orion.HG994398.1                            18503880 12 +  63665305 a---aata---ttgctcT----------------------------------
i Canis_lupus_orion.HG994398.1                           C 0 I 3
s Capra_aegagrus.CM003241.1                               18834713 17 +  46296322 t---aAAT---TTGGTCT--------------------------TT-A--TA
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18065514 17 -  44709034 t---aAAT---TTGGTCT--------------------------TT-A--TA
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    3418  8 -     12242 -----------------T--------------------------AT-TTATA
i Capromys_pilorides.CapPil_scaffold_65020               I 19 C 0
s Carlito_syrichta.NW_007259797.1                           158626 16 -    496798 a---catt---tcgCTCC---------------------------T-A--TG
i Carlito_syrichta.NW_007259797.1                        I 4 C 0
s Castor_canadensis.CasCan_scaffold_2074                    140170 17 +    179628 A---AATT---GTGCCTT--------------------------TT-A--TA
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     97181 17 +    217609 A---AACG---TTGCTTT--------------------------GT-A--AG
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18351956  6 -  23392119 a---tatt---t----------------------------------------
i Cavia_aperea.AVPZ01000300.1                            C 0 I 45
s Cavia_porcellus.DS562891.1                              18364216  6 -  23407841 a---tatt---t----------------------------------------
i Cavia_porcellus.DS562891.1                             C 0 I 45
s Cavia_tschudii.CavTsc_scaffold_8919                       103098  6 +    143979 A---TATT---T----------------------------------------
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 I 45
s Cebuella_pygmaea.k141_793006                                 674 17 -     15088 A---AACT---TTGCTCT--------------------------TT-A--TG
i Cebuella_pygmaea.k141_793006                           C 0 C 0
s Cebus_albifrons.Contig27                                25654154 17 +  26074798 A---AATT---TTGCTCT--------------------------TT-A--CG
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                2092 17 +     28840 A---AATT---TTGCTCT--------------------------TT-A--CG
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 1821 17 +     14051 A---AATT---TTGCTCT--------------------------TT-A--CG
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         8429 17 +     31688 A---CATT---TCGCTCC--------------------------TT-A--TG
i Cephalopachus_bancanus.k141_1423433                    I 4 C 0
s Ceratotherium_simum.JH767749.1                          12234700 17 +  27778364 a---aatt---tggctct--------------------------tt-a--ta
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5723 17 -     25243 A---AATT---TGGCTCT--------------------------TT-A--TA
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4480811 17 +   4669795 a---aatt---ttgctCG--------------------------TT-A--CG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        5312 17 +     17872 A---AATT---TTGCTCG--------------------------TT-A--CG
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           5900 17 -     14043 A---AATT---TTGCTCG--------------------------TT-A--CG
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          13999 17 +     27781 A---AATT---TTGCTCG--------------------------TT-A--CG
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        14159 17 -     20310 A---AATT---TTGCTCT--------------------------TT-A--TG
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          17132 17 +     29689 A---AATT---TTGCTCT--------------------------TT-A--TG
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           11891 17 -     20078 A---AATT---TTGCTCT--------------------------TT-A--TG
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          19805 17 -     27936 A---AATT---TTGCTCT--------------------------TT-A--TG
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            8678 17 -     17152 A---AATT---TTGCTCT--------------------------TT-A--TG
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38828405 17 +  39242232 A---AATT---TTGCTCT--------------------------TT-A--TG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21227910 17 -  21565898 A---AATT---TTGCTCT--------------------------TT-A--TG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       45022 17 -     53127 A---AATT---TTGCTCT--------------------------TT-A--TG
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        5283 17 +     13442 A---AATT---TTGCTCT--------------------------TT-A--TG
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       19825 17 -     27947 A---AATT---TTGCTCT--------------------------TT-A--TG
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         2853 17 +     10558 A---AATT---TTGCTCT--------------------------TT-A--TG
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          5856 17 +     14005 A---AATT---TTGCTCT--------------------------TT-A--TG
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            7430 19 -      8501 G---T-GCATTTTGCTCT--------------------------TT-A--TC
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Chiropotes_albinasus.k141_2206961                           2457 17 -     15524 A---AATT---TTGCTCT--------------------------TT-A--CG
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chiropotes_israelita.k141_747660                          101729 17 +    146308 A---AATT---TTGCTCT--------------------------TT-A--TG
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          33536 17 -     50570 A---AATT---TTGCTCT--------------------------TT-A--TG
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18433728 17 -  18827391 A---AATT---TTGCTCT--------------------------TT-A--TG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       20224 17 -     50209 A---AATT---TTGCTCT--------------------------TT-A--TG
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135427230 17 + 135778131 a---aatt---ttgctCT--------------------------TT-A--TG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1915766 17 +   2368649 a---aatt---ttgctct--------------------------tt-a--tg
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199954007 17 + 200372422 A---AATT---TTGCTCT--------------------------TT-A--TG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              42316 17 +     84244 A---AATT---TTGCTCT--------------------------TT-A--TG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17552116 17 -  53390261 a---gatt---tttcttt--------------------------tc-a--ta
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           3953 17 +     23735 A---AATT---TTGTTCT--------------------------TT-A--TA
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 53730 17 +     63868 A---AGTT---TTGCTCT--------------------------TT-A--GT
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11669498 17 + 224834208 A---AGTT---TTGCTCT--------------------------TT-A--AT
i Cricetulus_griseus.LT883664.1                          C 0 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_16129             31600 17 -     87169 A---AATT---TTGCTCT--------------------------TA-A--CA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    839092 17 +   1526836 A---GATT---TTGTTCT--------------------------TT-T--TA
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  38342  8 +     51376 -----------------T--------------------------CT-TTATA
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 19 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900             2175 33 -     75252 -----------------TCCTTATTATTAtttttttaattttatt--ttaaa
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 15 I 772
s Dasypus_novemcinctus.JH564415.1                            70422 16 +   2246927 G---C-CC---TAGCTCT--------------------------TC-G--TC
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16814891 17 +  35494412 t---acat---ttgctct--------------------------tt-a--ta
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  676542 17 +   1390856 a---aatt---tggctct--------------------------tt-a--ta
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    9302 17 +    198055 A---AATT---TGGCTCT--------------------------TT-A--TA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 35675  6 -     42551 T---TATT---T----------------------------------------
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 I 18
s Eidolon_helvum.KE797349.1                                    792 17 -     31197 a---tatt---ttgtttt--------------------------tt-a--ca
i Eidolon_helvum.KE797349.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       315159 17 +    607251 T---AAAT---TTggtct--------------------------tt-a--ca
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          24838 17 -    110024 A---AGTT---TTGCTCT--------------------------TT-A--AG
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 1
s Ellobius_talpinus.LOJH01081419.1                            4769 16 +      8657 A---AGTT---TT-CTCT--------------------------TT-A--AG
i Ellobius_talpinus.LOJH01081419.1                       C 0 I 1
s Eptesicus_fuscus.JH977646.1                              2150825 17 -  14770903 t---tatt---ttgctct--------------------------tg-a--TA
i Eptesicus_fuscus.JH977646.1                            I 232 C 0
s Equus_asinus.JREZ01000139.1                              1286835 17 +   4378816 a---aatt---ttgcttt--------------------------tt-a--ta
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18534644 17 -  39960074 a---aatt---ttgcttt--------------------------tt-a--ta
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               36673 17 +    498745 a---aatt---ttgcttt--------------------------tt-a--ta
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21210400 17 -  21539334 A---AATT---TTGCTCT--------------------------TT-A--TG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           14318 17 +    133382 T---ACAT---TTGCTCT--------------------------TT-A--TA
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             28267 17 -     44125 T---ACAT---TTGCTCT--------------------------TT-A--TA
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20240181 17 + 206538554 a---aatt---ttgctct--------------------------tt-a--ca
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20199053 17 + 205367284 a---aatt---ttgctct--------------------------tt-a--ca
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 12713 17 -     36744 A---AATT---TTGCTCT--------------------------TT-A--CA
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             852767  8 +   3816255 -----------------t--------------------------tt-ttata
i Fukomys_damarensis.KN121974.1                          I 18 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               5787 20 -      9135 ATTTATTT---TTACTCT--------------------------TT-A--TA
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     612407 17 -    660261 T---AAAC---CTggtct--------------------------tc-a--ta
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            35277 17 +     49224 A---ACTT---TTGctct--------------------------tt-a--ta
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_2066350                                652 17 +      1742 A---AATT---TTGCTCT--------------------------TT-A--TG
i Gorilla_beringei.k141_2066350                          I 21 I 26
s Gorilla_gorilla.CYUI03001204.1                             18080 17 -     63219 a---aatt---ttgctcT--------------------------TT-A--TG
i Gorilla_gorilla.CYUI03001204.1                         I 21 I 26
s Graphiurus_murinus.GraMur_scaffold_10447                   37132 17 +     78134 A---TGAT---TTATTCT--------------------------TT-A--TA
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               245416 17 +    327341 A---AATT---TTGCTCT--------------------------TA-A--CA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 23002 17 +     36099 T---AAAT---TTGGTCT--------------------------TT-A--TA
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               113750 17 +    128679 T---AAAT---TTGTTCT--------------------------TT-A--CA
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       113548 17 +   1711038 a---aatt---ttgttct--------------------------tt-a--ta
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188               2114 17 +      9903 A---AATT---TTGTTCT--------------------------TT-A--TA
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 C 0
s Hoolock_leuconedys.ctg274                                    440075 17 +    630532 A---AATT---TTGCTCT--------------------------TT-A--TG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  48383 17 +     55795 A---AATT---TTGCTCT--------------------------TT-A--CA
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            27069  6 -    143317 C---TATT---T----------------------------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 18
s Hystrix_cristata.HysCri_scaffold_5660                      85238 17 +    135385 A---AGTT---TTGCTCT--------------------------TT-A--TA
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7525287 14 -   7955117 -----gtt---ttgct-t--------------------------at-g--ca
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                2098 17 -     31341 C---ACAT---TTGCTCT--------------------------TT-A--TA
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8278819 17 -   9596543 A---AGTT---TTGTTCT--------------------------TC-A--CA
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                 1837 17 -     18011 T---ACAT---TTGCTCT--------------------------TT-A--CA
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         17779 17 -     38430 A---AATT---TTGCCCT--------------------------TT-A--TG
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    20275 17 -     42476 T---TATT---TTGCTCT--------------------------GG-A--TA
i Lasiurus_borealis.LasBor_scaffold_32767                I 12 C 0
s Leontocebus_fuscicollis.k141_1820339                        9412 17 +     64341 A---AATT---TTGTTCT--------------------------TT-A--CG
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           1754 17 -     35062 A---AATT---TTGCTCT--------------------------TT-A--CT
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        9441 17 +     35603 A---AATT---TTGCTCT--------------------------TT-A--CT
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    31057 17 +     38576 A---AACT---TTGCTCT--------------------------TT-A--TG
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         27761 17 +     66356 A---AACT---TTGCTCT--------------------------TT-A--TG
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3045229 12 +   3914936 a---aatt---ttgctct----------------------------------
i Leptonychotes_weddellii.KB714746.1                     C 0 I 3
s Lipotes_vexillifer.KE559953.1                             271370 17 -    662738 t---acat---ttgctct--------------------------tt-a--ta
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1442360 17 +   1826925 A---AATT---TTGCTCG--------------------------TT-A--CG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17958823 12 -  59628241 a---aata---ttgctcT----------------------------------
i Lycaon_pictus.CM007581.1                               C 0 I 3
s Macaca_arctoides.k141_2326796                              12171 17 +     40492 A---AATT---TTGCTCG--------------------------TT-A--CA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59681421 17 +  60120075 A---AATT---TTGCTCG--------------------------TT-A--CG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 17967 17 -     26193 A---AATT---TTGCTCG--------------------------TT-A--CG
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            85742 17 -    114318 A---AATT---TTGCTCG--------------------------TT-A--CG
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 11433 17 -     23192 A---AATT---TTGCTCG--------------------------TT-A--CG
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                20898 17 -     29190 A---AATT---TTGCTCG--------------------------TT-A--CG
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  29477 17 +     37952 A---AATT---TTGCTCG--------------------------TT-A--TG
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186844550 17 + 187317192 a---aatt---ttgctCG--------------------------TT-A--CG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25463131 17 -  25927173 a---aatt---ttgctCG--------------------------TT-A--CG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  85335 17 +     89720 A---AATT---TTGCTCG--------------------------TT-A--CG
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                12347 17 +     20474 A---AATT---TTGCTCG--------------------------TT-A--CG
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  12121 17 -     14993 A---AATT---TTGCTCG--------------------------TT-A--CG
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  334984 17 -    668171 A---AATT---TTGCTCG--------------------------TT-A--CG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                10411 17 -     24072 A---AATT---TTGCTCG--------------------------TT-A--CA
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               31042 17 -     45290 A---AATT---TTGCTCG--------------------------TT-A--CG
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                  5836 17 +    270270 A---TATT---TTGGTTT--------------------------TT-A--CA
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23942633 17 -  24302211 A---AATT---TTGCTCG--------------------------TT-A--CG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356741 17 +    752769 A---AATT---TTGCTCG--------------------------TT-A--CG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              21867 11 +    737560 ------------ccctct--------------------------tt-t--ca
i Manis_javanica.JSZB01003497.1                          I 990 C 0
s Manis_pentadactyla.KN006162.1                              54009 11 -    317179 ------------CCCTCT--------------------------TT-T--CA
i Manis_pentadactyla.KN006162.1                          I 987 C 0
s Marmota_marmota.CZRN01000018.1                          33106370 14 -  40650429 -----gtt---ttgct-t--------------------------at-g--ca
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        16398 17 -    207569 A---AATT---TTGTTCT--------------------------TT-A--GA
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 37425 17 +    140813 C---AGTT---TTGCTTT--------------------------TT-A--AT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 1
s Mesoplodon_bidens.MesBid_scaffold_108144                    6530 17 +     10310 T---ACAT---TTGCTCT--------------------------TT-A--TA
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Mico_argentatus.k141_1024458                                 673 17 -     20047 A---AACT---TTGCTCT--------------------------TT-A--TG
i Mico_argentatus.k141_1024458                           C 0 C 0
s Mico_humeralifer.k141_1346949                               1086 17 +      1399 A---AACT---TTGCTCT--------------------------TT-A--TG
i Mico_humeralifer.k141_1346949                          C 0 C 0
s Mico_schneideri.k141_916733                                        673 17 +      5107 A---AACT---TTGCTCT--------------------------TT-A--TG
i Mico_schneideri.k141_916733                                  C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1853588 17 +   8254450 t---aatt---ttgctct--------------------------tg-a--at
i Miniopterus_natalensis.LDJU01000034.1                  I 6 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             37266 17 +     64694 T---AATT---TTGCTCT--------------------------TG-A--AT
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 5 C 0
s Miopithecus_ogouensis.k141_534055                          14308 17 -     28506 A---AATT---TTGCTCT--------------------------TC-A--TG
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         8097 12 -      8324 a---aatt---ttgctct----------------------------------
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 3
s Monodon_monoceros.MonMon_M_scaffold_103                    30275 17 -    437263 T---ACAT---TTGCTCT--------------------------TT-A--TA
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 144300 17 -    366855 T---AATT---ATGCTCT--------------------------AG-A--TA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   4589 17 +     82753 T---AAAT---TTGGTCT--------------------------TC-A--TA
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_39021                     418 17 +      6696 A---AATT---TTGCTCT--------------------------TA-A--CA
i Mungos_mungo.MunMun_flattened_line_39021               n 17 I 291
s Murina_feae.MurFea_scaffold_85699                          10547 17 +     14753 T---TATT---TTGCTCT--------------------------TG-A--TA
i Murina_feae.MurFea_scaffold_85699                      I 11 C 0
s Mus_caroli.LT608237.1                                   84365019 17 - 120012414 A---AGTT---TTGCTCT--------------------------TT-A--AT
i Mus_caroli.LT608237.1                                  C 0 I 1
s Mus_musculus.chr8                                       87654423 17 - 129401213 A---AGTT---TTGCTCT--------------------------TT-A--AT
i Mus_musculus.chr8                                      C 0 I 1
s Mus_pahari.LT608297.1                                   31359126 17 -  89631738 A---AGTT---TTGCTCT--------------------------TT-A--TT
i Mus_pahari.LT608297.1                                  C 0 I 1
s Mus_spretus.CM004101.1                                  90757210 17 - 130317789 A---GGTT---TTGCTCT--------------------------TT-A--AT
i Mus_spretus.CM004101.1                                 C 0 I 1
s Muscardinus_avellanarius.MusAve_scaffold_82313              8760 17 +     14296 A---AGCT---TTGTTAT--------------------------TT-A--TA
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     73598  8 -     80779 -----------------T--------------------------CT-TTAAA
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 19 C 0
s Myotis_brandtii.KE162005.1                                284306 17 -  10118263 t---tatt---ttgctct--------------------------tg-a--tA
i Myotis_brandtii.KE162005.1                             I 1 C 0
s Myotis_davidii.KB100139.1                                1591624 17 -   6019432 t---tatt---ttgctct--------------------------tg-a--TA
i Myotis_davidii.KB100139.1                              I 1 C 0
s Myotis_lucifugus.GL429869.1                              3907725 17 -   4330536 t---tatt---ttgctct--------------------------tg-a--tA
i Myotis_lucifugus.GL429869.1                            I 1 C 0
s Myotis_myotis.MyoMyo_scaffold_44643                         2281 17 +     25416 T---TATT---TTGCTCT--------------------------TG-A--TA
i Myotis_myotis.MyoMyo_scaffold_44643                    I 1 C 0
s Nannospalax_galili.KL204047.1                            2039989 17 -   3037898 g---attt---ttgttcc--------------------------tt-t--ta
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               20373 17 +     21681 A---AATT---TTGCTCT--------------------------TT-A--TG
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20309685 12 +  31847680 a---aatt---ttgctct----------------------------------
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 3
s Neophocaena_asiaeorientalis.KZ687982.1                   5869240 17 +   7148211 t---acat---ttgctct--------------------------tt-a--ta
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    760520 18 +    783361 TT--AAGT---TTGCTCT--------------------------TG-A--TG
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9152740 12 -   9404916 a---aaga---ttgctCT----------------------------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 3
s Ochotona_princeps.JH802162.1                             1367985 17 +   3988456 A---AATT---TTGCTCT--------------------------TC-A--TA
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              508831 12 -   2017862 a---aatt---ttgctct----------------------------------
i Odobenus_rosmarus.KB229312.1                           C 0 I 3
s Odocoileus_virginianus.KZ100018.1                         147965 17 +    630418 T---AAAT---Ttggtct--------------------------tt-a--ta
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          82353 17 -    150152 t---aaat---ttggtct--------------------------tc-a--ta
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    84299 17 +    102263 A---AGTT---TTGCTCT--------------------------TT-G--AT
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 1
s Orcinus_orca.KB316932.1                                  2785131 17 -  10937097 t---acat---ttgctct--------------------------tt-a--ta
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       466167 12 -    559221 a---aata---ttgctCT----------------------------------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 3
s Ovis_aries.CM001607.2                                   17590801 17 +  44047080 t---aaAT---TTGGTCT--------------------------TT-A--TA
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      178952 17 -    191736 T---AAAT---TTGGTCT--------------------------TT-A--TA
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    48610 17 +     80009 a---aatt---ttgctcT--------------------------TT-A--TG
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189147478 18 + 189151597 a---aatt---ttgctct--------------------------ttta--tg
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  154238 17 +    230217 A---AATT---TTGCTCT--------------------------TT-A--CA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                267554 17 +  18783137 a---aatt---ttgctct--------------------------tt-a--ca
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4724374 17 -   8748460 a---aatt---ttgctct--------------------------tt-a--ca
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1269682 17 -   2937107 t---aaat---ttggtct--------------------------tt-a--ta
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183448534 20 + 183742232 A---AATTA--TTGCTCG----AT--------------------GT-A--CG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            12080 17 +     20448 A---AATT---TTGCTCG--------------------------TT-A--CG
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20568891 17 +  20919399 A---AATT---TTGCTCG--------------------------TT-A--CG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                  10837 17 +     41871 A---AATT---TTGCTCG--------------------------TT-A--CG
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    14115 17 +     27711 A---AATT---TTGCTCG--------------------------TT-A--CG
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  5114 17 -     11374 A---AATT---TTGCTCG--------------------------TT-A--CG
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15660 17 -     78924 A---AATT---TTGCTCT--------------------------TT-A--CA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18215041 17 -  18517816 A---AGTT---TTGCTCT--------------------------TT-G--AT
i Peromyscus_maniculatus.KI615324.1                      C 0 I 1
s Petromus_typicus.PetTyp_scaffold_221660                     1040  8 -      2102 -----------------T--------------------------TT-TTATA
i Petromus_typicus.PetTyp_scaffold_221660                I 18 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              12202 17 +     63832 T---ACAT---TTGCTCT--------------------------TT-A--TA
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            3476 17 +     68526 A---AATT---TTGCTCT--------------------------TT-A--TA
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        43614 17 +     89929 A---AATT---TTGCTCT--------------------------TT-A--TA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            45030 17 +     51399 A---AATT---TTGCTCT--------------------------TT-A--TA
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14301266 17 -  14605196 a---aatt---ttgctct--------------------------tt-a--ta
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             5606 17 +     22620 T---TATT---TTGCTCT--------------------------TG-A--TG
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 234 C 0
s Pithecia_albicans.k141_1476471                              7001 17 +     26961 A---AATT---TTGCTCT--------------------------TT-A--TG
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          3128 17 +     23417 A---AATT---TTGCTCT--------------------------TT-A--TG
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                6993 17 +     29694 A---AATT---TTGCTCT--------------------------TT-A--TG
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          32019 17 +     52772 A---AATT---TTGCTCT--------------------------TT-A--TG
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           7015 17 +     26198 A---AATT---TTGCTCT--------------------------TT-A--TG
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3943545 17 +   4542175 A---AATT---TTGCTTT--------------------------TT-A--TG
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            6979 17 -     23490 A---AATT---TTGCTCT--------------------------TT-A--TG
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610           1742 17 +      7680 T---ACAT---TTGCTCT--------------------------TT-A--TA
i Platanista_gangetica.PlaMin_flattened_line_173610      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       11242 17 -     39866 A---AATT---TTGCTCT--------------------------TT-A--TG
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        20405 17 +     34906 A---AATT---TTGCTCT--------------------------TT-A--TG
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       24667 17 +     87950 A---AATT---TTGCTCT--------------------------TT-A--TG
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     25494 17 +     88961 A---AATT---TTGCTCT--------------------------TT-A--TG
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         11164 17 +     39403 A---AATT---TTGCTCT--------------------------TT-A--TG
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          24947 17 -     87928 A---AATT---TTGCTCT--------------------------TT-A--TG
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         31909 17 +     60166 A---AATT---TTGCTCT--------------------------TT-A--TG
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      32105 17 +     67232 A---AATT---TTGCTCT--------------------------TT-A--TG
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          27578 17 +     90634 A---AATT---TTGCTCT--------------------------TT-A--TG
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          24951 17 -     89403 A---AATT---TTGCTCT--------------------------TT-A--TG
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189136398 17 + 189387572 a---aatt---ttgctcT--------------------------TT-A--TG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9576008 17 +   9816681 A---AATT---TTGCTCT--------------------------TT-A--TG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               78554 17 -     81375 A---AATT---TTGCTCT--------------------------TT-A--TG
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                             10390 17 +     19060 A---AATT---TTGCTCT--------------------------TT-A--TG
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            15063 17 -     21651 c---agtt---ttgcttt--------------------------tt-a--at
i Psammomys_obesus.NESX01036370.1                        C 0 I 1
s Pteronotus_parnellii.KE909381.1                            17843 17 -     21811 t---gatt---ttgctCT--------------------------TG-A--TA
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteropus_alecto.KB030862.1                              22987239 17 +  28871421 a---tatt---ttgtttt--------------------------tt-a--ca
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1370799 17 +   4952924 a---tatt---ttgtttt--------------------------tt-a--ca
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20277441 17 -  38429054 a---aatt---ttgctct--------------------------tt-a--ca
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             20367 17 -     91421 A---AATT---TTGCTCT--------------------------TT-A--TG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7614492 17 +   7812017 A---AATT---TTGCTCT--------------------------TT-A--TG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             20397 17 -     72585 A---AATT---TTGCTCT--------------------------TT-A--TG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  9803 17 +     55207 T---AAAT---TTGGTCT--------------------------TT-A--TA
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53574453 17 +  90668790 A---AGTT---TTGCTCT--------------------------TT-A--AT
i Rattus_norvegicus.chr16                                C 0 I 1
s Rhinolophus_sinicus.LVEH01000134.1                        370011 17 -   3329780 a---aatt---ttgttct--------------------------tt-a--ta
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_1041714                             960 17 +      5697 A---AATT---TTGCTCT--------------------------TT-A--TG
i Rhinopithecus_bieti.k119_1041714                       C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91241433 17 - 195417433 a---aatt---ttgctcT--------------------------TT-A--TG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7677081 17 +   7961872 A---AATT---TTGCTCT--------------------------TT-A--TG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_301684                  71 17 +       280 A---TATT---TTGGATT--------------------------TT-A--CA
i Rousettus_aegyptiacus.RouAeg_scaffold_301684           C 0 C 0
s Saguinus_bicolor.k141_8081                                  2722 17 +     42994 A---AATT---TTGCTCT--------------------------TT-A--CG
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                             1397 17 +      2253 A---AATT---TTGCTCT--------------------------TT-A--CG
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               1845 17 -      8737 A---AATT---TTGCTCT--------------------------TT-A--CG
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                              1477 17 +      2343 A---AATT---TTGCTCT--------------------------TT-A--CA
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209476379 17 + 209938924 A---AATT---TTGCTCT--------------------------TT-A--CG
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                 804 17 -      7576 A---AATT---TTGCTCT--------------------------TT-A--CG
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_133311                       2259 17 +      9503 T---AAAT---TTGGACT--------------------------TT-A--TA
i Saiga_tatarica.SaiTat_scaffold_133311                  I 1 C 0
s Saimiri_boliviensis.NW_024100920.1                     119952439 12 - 121099817 A---AATT---TTgctct----------------------------------
i Saimiri_boliviensis.NW_024100920.1                     C 0 I 3
s Saimiri_cassiquiarensis.k141_2188234                       24781 12 +     46362 A---AATT---TTGCTCT----------------------------------
i Saimiri_cassiquiarensis.k141_2188234                   C 0 I 3
s Saimiri_macrodon.k141_716185                               24876 12 +     45824 A---AATT---TTGCTCT----------------------------------
i Saimiri_macrodon.k141_716185                           C 0 I 3
s Saimiri_oerstedii.k141_1487881                             41555 12 -     64574 A---AATT---TTGCTCT----------------------------------
i Saimiri_oerstedii.k141_1487881                         C 0 I 3
s Saimiri_sciureus.k141_2278166                               4628 12 -     23631 A---AATT---TTGCTCT----------------------------------
i Saimiri_sciureus.k141_2278166                          C 0 I 3
s Saimiri_ustus.k141_1484609                                 24772 12 -     61129 A---AATT---TTGCTCT----------------------------------
i Saimiri_ustus.k141_1484609                             C 0 I 3
s Sapajus_apella.ctg103                                    5422112 17 -   5703754 A---AATT---TTGCTCT--------------------------TT-A--CG
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          57353 17 -     80660 A---AATT---TTGCTCT--------------------------TT-A--CG
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    156199 17 -    313613 a---aatt---tttcttt--------------------------tc-a--ta
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                         5226 17 -     12572 A---AATT---TTGCTCT--------------------------TT-A--TG
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      32079 17 +     39453 A---AATT---TTGCTCT--------------------------TT-A--TG
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           12583 17 +     27826 A---AATT---TTGCTCT--------------------------TT-A--TG
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            12129 17 -     19483 A---AATT---TTGCTCT--------------------------TT-A--TG
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      5425 17 -     12762 A---AATT---TTGCTCT--------------------------TT-A--TG
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           5268 17 +     13763 A---AATT---TTGCTCT--------------------------TT-A--TG
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     4126 17 -     30804 a---agtt---ttgctcc--------------------------tt-t--tt
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 I 1
s Spermophilus_dauricus.KZ294078.1                         1957171 14 -   3870691 -----gtt---ttgct-t--------------------------at-g--ca
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              21684 17 -    196729 A---AATG---TTGCTCT--------------------------TA-A--CA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6814778 16 +  69701581 A---AATG---TT-ctct--------------------------tt-a--ca
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                14367 17 +     41958 T---AATT---TTGCTCT--------------------------TG-A--TA
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 4 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      122016 17 -    156842 A---AATT---TTGCTCT--------------------------TT-A--TA
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    390495 17 +    539355 A---AATT---TTGCTCT--------------------------TT-A--TA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               29123 17 +     70052 A---CATT---TGGCTCC--------------------------TT-A--TG
i Tarsius_lariang.k141_2201908                           I 4 C 0
s Tarsius_wallacei.k141_254427                                3919 17 -     16117 A---CATT---TGGTTCC--------------------------TT-A--TG
i Tarsius_wallacei.k141_254427                           I 4 C 0
s Theropithecus_gelada.CM009954.1                        186433742 17 + 186847797 A---AATT---TTGCTCG--------------------------TT-A--CA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              107864  8 +    114563 -----------------A--------------------------TG-ATATA
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 18 C 0
s Tolypeutes_matacus.TolMat_scaffold_85600                    5516 19 +     18632 G---C-ACATTTTGCTCT--------------------------TC-A--TC
i Tolypeutes_matacus.TolMat_scaffold_85600               C 0 C 0
s Trachypithecus_auratus.k141_722599                         16165 17 -     20410 A---AATT---TTGCTCT--------------------------TT-A--TG
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      5285 17 -     12674 A---AATT---TTGCTCT--------------------------TT-A--TG
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       16273 17 +     19930 A---AATT---TTGCTCT--------------------------TT-A--TG
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      12673 17 -     19997 A---AATT---TTGCTCT--------------------------TT-A--TG
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            52816 17 -     60166 A---AATT---TTGCTCT--------------------------TT-A--TG
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        20279 17 -     27529 A---AATT---TTGCTCT--------------------------TT-A--TG
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                       1907 17 +      9229 A---AATT---TTGCTCT--------------------------TT-A--TG
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          13806 17 -     21137 A---AATT---TTGCTCT--------------------------TT-A--TG
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                    1911 17 +      9131 A---AATT---TTGCTCT--------------------------TT-A--TG
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                         1870 17 -      3730 A---AATT---TTGCTCT--------------------------TT-A--TG
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        30139 17 +     32220 A---AATT---TTGCTCT--------------------------TT-A--TG
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5944237 17 +   6242583 A---AATT---TTGCTCT--------------------------TT-A--TG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       13494 17 +     20839 A---AATT---TTGCTCT--------------------------TT-A--TG
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    3682 17 +     27266 T---AAAC---TTGCTCT--------------------------TT-A--TA
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tupaia_chinensis.KB320699.1                              2166301 17 +   4065304 a---aatt---ttatttt--------------------------tc-a--ta
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       2665 17 +     70247 A---AATT---TTGCTTT--------------------------TC-A--TA
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15741383 17 +  33153633 T---ACAt---ttgctct--------------------------tt-a--ta
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   56285 17 -     77625 A---AATT---TTTCTCT--------------------------TC-A--TA
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4852776 12 -   5085361 a---aatt---ttgctct----------------------------------
i Ursus_maritimus.KK499267.1                             C 0 I 3
s Vulpes_lagopus.VulLag_flattened_line_30954                 14281 12 -     43706 A---AATA---TTGCTCT----------------------------------
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 3
s Xerus_inauris.XerIna_scaffold_2302                          4205 15 +    224448 -----GTT---TTGCTAT--------------------------TT-G--CA
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      17541 17 +     63895 A---AGTT---TTGTTCT--------------------------TC-A--CA
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_1424488             19 17 -       542 T---ACAT---TTGCTCT--------------------------TT-A--TA
i Ziphius_cavirostris.ZipCav_flattened_line_1424488      C 0 C 0
e Cheracebus_torquatus.k141_1170026                          64344 81 +     76511 I
e Cheracebus_regulus.k141_471822                            159875 81 -    216457 I
e Cheracebus_lugens.k141_1393925                              2308 81 +     17877 I
e Cheracebus_lucifer.k141_49986                               2432 81 -     17098 I
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vicugna_pacos.KN270157.1                                 5374276 47 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tonatia_saurophila.TonSau_scaffold_294                     83346 714 +    610378 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             33151 10 +     97271 I
e Sorex_araneus.JH798187.1                                13653314 9235 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Pteronura_brasiliensis.PteBra_flattened_line_76658           895 10 -      3818 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                       107181400  0 - 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Ondatra_zibethicus.OndZib_scaffold_7387                      632 3336 +    140218 I
e Octodon_degus.JH651603.1                                  750513 17 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Mustela_putorius.JH418006.1                               304037 10 -  14710649 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                18000 920 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184766 1004 -  29670104 I
e Mellivora_capensis.MelCap_flattened_line_69365             12726 10 +     13704 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     5119  0 +     14121 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20664195 469 +  22651954 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Enhydra_lutris.KZ291758.1                               16338962 10 -  41312741 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    39057 4687 +     67921 I
e Desmodus_rotundus.KZ672289.1                             8632254 708 +  20541912 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Crocidura_indochinensis.CroInd_scaffold_37019               6144 44 -     19598 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1255607 4808 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Carollia_perspicillata.CarPer_scaffold_92756                7250 707 -     11696 I
e Camelus_ferus.KB017975.1                                  405530 47 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2337232 47 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10004760 47 -  17673402 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6909 705 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Anoura_caudifer.AnoCau_scaffold_1412                      187499 706 +    412891 I
e Ailurus_fulgens.LNAC01001112.1                             81934 10 -    347723 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      11279 4 +     62944 T---A-TT
s Acinonyx_jubatus.LLWD01001279.1                           830422 4 -   1699592 c---a-tt
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     74521 4 +     87051 T---A-TT
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 1 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     76087 4 -     89534 C---A-TG
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   19880 4 -     52922 T---A-TT
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         19811 4 -     28001 T---A-TT
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                         10305 4 -     18505 T---A-TT
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                          11163 4 -     12518 T---A-TT
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             11496 4 +     51355 T---G-TT
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                4607 4 -     36483 T---G-TT
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              15059 4 +     28687 T---G-TT
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 3532 4 +     27940 T---G-TT
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            4620 4 -      9457 T---G-TT
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             3578 4 +     30492 T---G-TT
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              7799 4 +     47717 T---G-TT
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              4300 4 +      5663 T---G-TT
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             18751 4 +     50774 T---G-TT
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          680700 4 -   2318259 T---A-TG
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303              1970 4 -     32520 T---A-TT
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 C 0
s Aotus_azarae.k141_3104676                                  17292 4 -     33861 T---A-TT
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            17290 4 -     34016 T---A-TT
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299717 4 -   5030052 t---a-tt
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             17326 4 -     34685 T---A-TT
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               30450 4 -     47192 T---A-TT
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      15737 4 +     20879 T---A-TT
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21211978 4 -  21539123 T---A-TT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               46777 4 -     48001 T---A-TT
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 29578 4 -     30947 T---A-TT
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               11353 4 -     89868 T---A-TT
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              15735 4 -     40414 T---A-TT
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                23623 4 +     72325 T---A-TT
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15195033 4 +  23207421 t---a-tt
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         5498 4 -     18090 t---a-tt
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    31780 4 +     34529 T---A-TT
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    204415 4 -    288883 t---a-tt
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20277652 4 +  48749331 t---a-tt
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1130206 4 -   1948126 t---a-tt
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18088290 4 +  45695690 t---a-tt
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2824242 4 +   4408762 t---a-tt
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                104618 4 -    122966 T---A-TT
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   64121 4 +     81800 T---A-TT
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  33303 4 -     95584 T---A-TT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         57403 4 -    119600 T---A-TT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_10318                               1054 4 +     27907 T---A-TT
i Callibella_humilis.k141_10318                          C 0 C 0
s Callimico_goeldii.k141_737284                                695 4 -     31217 T---A-TT
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                              990 4 +      5377 T---A-TT
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592851 4 - 189096842 T---A-TT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1665 4 -     12329 T---A-TT
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Capra_aegagrus.CM003241.1                               18834730 4 +  46296322 T---A-TG
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18065531 4 -  44709034 T---A-TG
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    3426 1 -     12242 T-------
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           158642 4 -    496798 T---A-TT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    140187 4 +    179628 C---A-TG
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     97198 4 +    217609 T---A-TT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18352007 1 -  23392119 t-------
i Cavia_aperea.AVPZ01000300.1                            I 45 C 0
s Cavia_porcellus.DS562891.1                              18364267 1 -  23407841 t-------
i Cavia_porcellus.DS562891.1                             I 45 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                       103149 1 +    143979 T-------
i Cavia_tschudii.CavTsc_scaffold_8919                    I 45 C 0
s Cebuella_pygmaea.k141_793006                                 691 4 -     15088 T---A-TT
i Cebuella_pygmaea.k141_793006                           C 0 C 0
s Cebus_albifrons.Contig27                                25654171 4 +  26074798 T---A-TT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                2109 4 +     28840 T---A-TT
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 1838 4 +     14051 T---A-TT
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         8446 4 +     31688 T---A-TT
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12234717 4 +  27778364 c---a-tt
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5740 4 -     25243 C---A-TT
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4480828 4 +   4669795 T---A-TT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        5329 4 +     17872 T---A-TT
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           5917 4 -     14043 T---A-TT
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          14016 4 +     27781 T---A-TT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        14176 4 -     20310 T---A-TT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          17149 4 +     29689 T---A-TT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           11908 4 -     20078 T---A-TT
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          19822 4 -     27936 T---A-TT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            8695 4 -     17152 T---A-TT
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38828422 4 +  39242232 T---A-TT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21227927 4 -  21565898 T---A-TT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       45039 4 -     53127 T---A-TT
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        5300 4 +     13442 T---A-TT
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       19842 4 -     27947 T---A-TT
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         2870 4 +     10558 T---A-TT
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          5873 4 +     14005 T---A-TT
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            7449 4 -      8501 T---A-TT
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Chiropotes_albinasus.k141_2206961                           2474 4 -     15524 T---A-TT
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chiropotes_israelita.k141_747660                          101746 4 +    146308 T---A-TT
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          33553 4 -     50570 T---A-TT
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18433745 4 -  18827391 T---A-TT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       20241 4 -     50209 T---A-TT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135427247 4 + 135778131 T---A-TT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1915783 4 +   2368649 t---a-tt
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199954024 4 + 200372422 T---A-TT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              42333 4 +     84244 T---A-TT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17552133 4 -  53390261 c---a-cT
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           3970 4 +     23735 C---A-TT
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 53747 4 +     63868 C---A-TT
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11669516 4 + 224834208 C---T-TT
i Cricetulus_griseus.LT883664.1                          I 1 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             31617 4 -     87169 C---A-Tt
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    839109 7 +   1526836 AAATT-TT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  38350 1 +     51376 T-------
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900             2980 1 -     75252 T-------
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 772 C 0
s Dasypus_novemcinctus.JH564415.1                            70438 4 +   2246927 T---G-AT
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16814908 4 +  35494412 t---a-tt
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  676559 4 +   1390856 c---a-tt
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    9319 4 +    198055 C---A-TT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 35699 1 -     42551 T-------
i Dolichotis_patagonum.DolPat_scaffold_30833             I 18 C 0
s Eidolon_helvum.KE797349.1                                    809 4 -     31197 c---a-tt
i Eidolon_helvum.KE797349.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       315176 4 +    607251 t---a-tt
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          24856 4 -    110024 C---A-TT
i Ellobius_lutescens.LOEQ01008920.1                      I 1 C 0
s Ellobius_talpinus.LOJH01081419.1                            4786 4 +      8657 C---A-TT
i Ellobius_talpinus.LOJH01081419.1                       I 1 C 0
s Eptesicus_fuscus.JH977646.1                              2150842 4 -  14770903 C---A-TG
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1286852 4 +   4378816 g---a-tT
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18534661 4 -  39960074 g---a-tT
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               36690 4 +    498745 g---a-tT
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21210417 4 -  21539334 T---A-TT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           14335 4 +    133382 T---A-TT
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             28284 4 -     44125 T---A-TT
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20240198 4 + 206538554 c---a-tt
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20199070 4 + 205367284 c---a-tt
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 12730 4 -     36744 C---A-TT
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             852775 4 +   3816255 t---g-tt
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               5807 4 -      9135 C---A-TT
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     612424 4 -    660261 t---a-tt
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            35294 4 +     49224 c---a-tt
i Glis_glis.GliGli_scaffold_19807                        C 0 I 229
s Gorilla_beringei.k141_3596273                              20505 4 -     32273 T---A-TT
i Gorilla_beringei.k141_3596273                          I 17 C 0
s Gorilla_gorilla.LT578341.1                             186342640 4 + 186649187 T---A-TT
i Gorilla_gorilla.LT578341.1                             I 16 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   37149 4 +     78134 C---A-TT
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               245433 4 +    327341 C---A-Tt
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 23019 4 +     36099 T---A-TG
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               113767 4 +    128679 T---A-TT
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       113565 4 +   1711038 c---a-tt
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188               2131 4 +      9903 C---A-TT
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 C 0
s Hoolock_leuconedys.ctg274                                    440092 4 +    630532 T---A-TT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  48400 4 +     55795 C---A-TT
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            27093 1 -    143317 T-------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 18 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      85255 4 +    135385 T---G-TT
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7525301 4 -   7955117 c---a-tt
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                2115 4 -     31341 T---A-TT
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8278836 4 -   9596543 C---A-TA
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                 1854 4 -     18011 T---A-TT
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         17796 4 -     38430 T---A-TT
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    20292 4 -     42476 C---A-GT
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 7
s Leontocebus_fuscicollis.k141_1820339                        9429 4 +     64341 T---A-TT
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           1771 4 -     35062 T---A-TT
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        9458 4 +     35603 T---A-TT
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    31074 4 +     38576 T---A-TT
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         27778 4 +     66356 T---A-TT
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             271387 4 -    662738 t---a-tt
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1442377 4 +   1826925 T---A-TT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                              12188 4 +     40492 T---A-TT
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59681438 4 +  60120075 T---A-TT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 17984 4 -     26193 T---A-TT
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            85759 4 -    114318 T---A-TT
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 11450 4 -     23192 T---A-TT
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                20915 4 -     29190 T---A-TT
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  29494 4 +     37952 T---A-TT
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186844567 4 + 187317192 T---A-TT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25463148 4 -  25927173 T---A-TT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  85352 4 +     89720 T---A-TT
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                12364 4 +     20474 T---A-TT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  12138 4 -     14993 T---A-TT
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  335001 4 -    668171 T---A-TT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                10428 4 -     24072 T---A-TT
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               31059 4 -     45290 T---A-TT
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                  5853 4 +    270270 C---A-TT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23942650 4 -  24302211 T---A-TT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356758 4 +    752769 T---A-TT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              21878 4 +    737560 c---t-ag
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              54020 4 -    317179 C---T-AG
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33106384 4 -  40650429 c---a-tt
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        16415 4 -    207569 C---A-TT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 37443 4 +    140813 T---A-TT
i Meriones_unguiculatus.MerUng_scaffold_7390             I 1 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    6547 4 +     10310 T---A-TT
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Mico_argentatus.k141_1024458                                 690 4 -     20047 T---A-TT
i Mico_argentatus.k141_1024458                           C 0 C 0
s Mico_humeralifer.k141_1346949                               1103 4 +      1399 T---A-TT
i Mico_humeralifer.k141_1346949                          C 0 C 0
s Mico_schneideri.k141_916733                                        690 4 +      5107 T---A-TT
i Mico_schneideri.k141_916733                                  C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1853605 4 +   8254450 c---a-tt
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             37283 4 +     64694 C---A-TT
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                          14325 4 -     28506 T---A-TT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    30292 4 -    437263 T---A-TT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 144317 4 -    366855 C---A-TT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   4606 4 +     82753 T---A-TT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_40893                     434 4 +      5729 C---A-Tt
i Mungos_mungo.MunMun_flattened_line_40893               I 17 C 0
s Murina_feae.MurFea_scaffold_85699                          10564 4 +     14753 T---A-TT
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84365037 4 - 120012414 T---G-TT
i Mus_caroli.LT608237.1                                  I 1 C 0
s Mus_musculus.chr8                                       87654441 4 - 129401213 T---G-TT
i Mus_musculus.chr8                                      I 1 C 0
s Mus_pahari.LT608297.1                                   31359144 4 -  89631738 T---G-TT
i Mus_pahari.LT608297.1                                  I 1 C 0
s Mus_spretus.CM004101.1                                  90757228 4 - 130317789 T---G-TT
i Mus_spretus.CM004101.1                                 I 1 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              8777 4 +     14296 C---A-TT
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     73606 1 -     80779 T-------
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                284323 4 -  10118263 C---A-TT
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1591641 4 -   6019432 C---A-TT
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3907742 4 -   4330536 C---A-TT
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_44643                         2298 4 +     25416 C---A-TT
i Myotis_myotis.MyoMyo_scaffold_44643                    C 0 C 0
s Nannospalax_galili.KL204047.1                            2040006 4 -   3037898 c---a-tt
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               20390 4 +     21681 T---A-TT
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5869257 4 +   7148211 t---a-tt
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    760538 4 +    783361 A---A-TT
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Ochotona_princeps.JH802162.1                             1368002 4 +   3988456 A---A-TT
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         147982 4 +    630418 t---a-tt
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          82370 4 -    150152 t---a-tt
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    84317 4 +    102263 T---A-TT
i Onychomys_torridus.OnyTor_scaffold_2986                I 1 C 0
s Orcinus_orca.KB316932.1                                  2785148 4 -  10937097 t---a-tt
i Orcinus_orca.KB316932.1                                C 0 C 0
s Ovis_aries.CM001607.2                                   17590818 4 +  44047080 T---A-TG
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      178969 4 -    191736 T---A-TG
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    48627 4 +     80009 T---A-TT
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189147496 4 + 189151597 t---a-tt
i Pan_troglodytes.CM009242.2                             C 0 I 7
s Panthera_onca.PanOnc_flattened_line_3271                  154255 4 +    230217 C---A-TT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                267571 4 +  18783137 c---a-tt
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4724391 4 -   8748460 c---a-tt
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1269699 4 -   2937107 t---a-tt
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183448554 4 + 183742232 T---T-TT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            12097 4 +     20448 T---A-TT
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20568908 4 +  20919399 T---G-TT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                  10854 4 +     41871 T---A-TT
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    14132 4 +     27711 T---A-TT
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  5131 4 -     11374 T---A-TT
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15677 4 -     78924 C---A-TT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18215059 4 -  18517816 T---A-TT
i Peromyscus_maniculatus.KI615324.1                      I 1 C 0
s Petromus_typicus.PetTyp_scaffold_221660                     1048 4 -      2102 T---G-TC
i Petromus_typicus.PetTyp_scaffold_221660                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              12219 4 +     63832 T---A-TT
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            3493 4 +     68526 T---A-TT
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        43631 4 +     89929 T---A-TT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            45047 4 +     51399 T---A-TT
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14301283 4 -  14605196 t---a-tt
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             5623 4 +     22620 C---A-TG
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pithecia_albicans.k141_1476471                              7018 4 +     26961 T---A-TT
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          3145 4 +     23417 T---A-TT
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                7010 4 +     29694 T---A-TT
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          32036 4 +     52772 T---A-TT
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           7032 4 +     26198 T---A-TT
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3943562 4 +   4542175 T---A-TT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            6996 4 -     23490 T---A-TT
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610           1759 4 +      7680 T---A-TT
i Platanista_gangetica.PlaMin_flattened_line_173610      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       11259 4 -     39866 T---A-TT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        20422 4 +     34906 T---A-TT
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       24684 4 +     87950 T---A-TT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     25511 4 +     88961 T---A-TT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         11181 4 +     39403 T---A-TT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          24964 4 -     87928 T---A-TT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         31926 4 +     60166 T---A-TT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      32122 4 +     67232 T---A-TT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          27595 4 +     90634 T---A-TT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          24968 4 -     89403 T---A-TT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189136415 4 + 189387572 T---A-TT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9576025 4 +   9816681 T---A-TT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               78571 4 -     81375 T---A-TT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                             10407 4 +     19060 T---A-TT
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            15081 4 -     21651 t---a-tt
i Psammomys_obesus.NESX01036370.1                        I 1 C 0
s Pteronotus_parnellii.KE909381.1                            17860 4 -     21811 C---A-TT
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteropus_alecto.KB030862.1                              22987256 4 +  28871421 c---a-tt
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1370816 4 +   4952924 c---a-tt
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20277458 4 -  38429054 c---a-tt
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             20384 4 -     91421 T---A-TT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7614509 4 +   7812017 T---A-TT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             20414 4 -     72585 T---A-TT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  9820 4 +     55207 T---A-TT
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53574471 4 +  90668790 C---A-TT
i Rattus_norvegicus.chr16                                I 1 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        370028 4 -   3329780 c---t-tt
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_1041714                             977 4 +      5697 T---A-TT
i Rhinopithecus_bieti.k119_1041714                       C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91241450 4 - 195417433 T---A-TT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7677098 5 +   7961872 T---ATTT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_301684                  88 4 +       280 C---A-TT
i Rousettus_aegyptiacus.RouAeg_scaffold_301684           C 0 C 0
s Saguinus_bicolor.k141_8081                                  2739 4 +     42994 T---A-TT
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                             1414 4 +      2253 T---A-TT
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               1862 4 -      8737 T---A-TT
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                              1494 4 +      2343 T---A-TT
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209476396 4 + 209938924 T---A-TT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                 821 4 -      7576 T---A-TT
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_133311                       2276 4 +      9503 T---A-TT
i Saiga_tatarica.SaiTat_scaffold_133311                  C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119952454 4 - 121099817 t---a-tt
i Saimiri_boliviensis.NW_024100920.1                     I 3 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24796 4 +     46362 T---A-TT
i Saimiri_cassiquiarensis.k141_2188234                   I 3 C 0
s Saimiri_macrodon.k141_716185                               24891 4 +     45824 T---A-TT
i Saimiri_macrodon.k141_716185                           I 3 C 0
s Saimiri_oerstedii.k141_1487881                             41570 4 -     64574 T---A-TT
i Saimiri_oerstedii.k141_1487881                         I 3 C 0
s Saimiri_sciureus.k141_2278166                               4643 4 -     23631 T---A-TT
i Saimiri_sciureus.k141_2278166                          I 3 C 0
s Saimiri_ustus.k141_1484609                                 24787 4 -     61129 T---A-TT
i Saimiri_ustus.k141_1484609                             I 3 C 0
s Sapajus_apella.ctg103                                    5422129 4 -   5703754 T---A-TG
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          57370 4 -     80660 T---A-TG
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    156216 4 -    313613 c---a-tt
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                         5243 4 -     12572 T---A-TT
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      32096 4 +     39453 T---A-TT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           12600 4 +     27826 T---A-TT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            12146 4 -     19483 T---A-TT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      5442 4 -     12762 T---A-TT
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           5285 4 +     13763 T---A-TT
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     4144 4 -     30804 g---a-tt
i Sigmodon_hispidus.SigHis_scaffold_42075                I 1 I 101
s Spermophilus_dauricus.KZ294078.1                         1957185 4 -   3870691 c---a-tt
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              21701 4 -    196729 C---A-Tt
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6814794 4 +  69701581 c---a-tt
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                14384 4 +     41958 C---G-TT
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      122033 4 -    156842 A---A-TT
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    390512 4 +    539355 A---A-TT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               29140 4 +     70052 T---A-TT
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                3936 4 -     16117 T---A-TT
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186433759 4 + 186847797 T---A-TT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              107872 4 +    114563 T---G-TC
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_85600                    5535 4 +     18632 T---A-TT
i Tolypeutes_matacus.TolMat_scaffold_85600               C 0 C 0
s Trachypithecus_auratus.k141_722599                         16182 4 -     20410 T---A-TT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      5302 4 -     12674 T---A-TT
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       16290 4 +     19930 T---A-TT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      12690 4 -     19997 T---A-TT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            52833 4 -     60166 T---A-TT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        20296 4 -     27529 T---A-TT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                       1924 4 +      9229 T---A-TT
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          13823 4 -     21137 T---A-TT
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                    1928 4 +      9131 T---A-TT
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                         1887 4 -      3730 T---A-TT
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        30156 4 +     32220 T---A-TT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5944254 4 +   6242583 T---A-TT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       13511 4 +     20839 T---A-TT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    3699 4 +     27266 T---A-TT
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tupaia_chinensis.KB320699.1                              2166318 2 +   4065304 t---a---
i Tupaia_chinensis.KB320699.1                            C 0 I 5
s Tupaia_tana.TupTan_flattened_line_394                       2682 2 +     70247 T---A---
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 5
s Tursiops_truncatus.MRVK01000835.1                       15741400 4 +  33153633 t---a-tt
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   56302 4 -     77625 C---A-TT
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          4220 4 +    224448 C---A-TT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      17558 4 +     63895 C---A-TT
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_1424488             36 4 -       542 T---A-TT
i Ziphius_cavirostris.ZipCav_flattened_line_1424488      C 0 C 0
e Cheracebus_torquatus.k141_1170026                          64344 81 +     76511 I
e Cheracebus_regulus.k141_471822                            159875 81 -    216457 I
e Cheracebus_lugens.k141_1393925                              2308 81 +     17877 I
e Cheracebus_lucifer.k141_49986                               2432 81 -     17098 I
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202 0 +      8798 C
e Galago_senegalensis.k141_631886                             7400 0 +     11339 C
e Galago_moholi.ctg2040                                     429710 0 -    453645 C
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445 0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734 0 -     33856 C
e Perodicticus_potto.k141_1186926                              597 0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219 0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 14293 3 -     43706 I
e Vicugna_pacos.KN270157.1                                 5374276 47 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4852788 3 -   5085361 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tonatia_saurophila.TonSau_scaffold_294                     83346 714 +    610378 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             33151 10 +     97271 I
e Sorex_araneus.JH798187.1                                13653314 9235 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Pteronura_brasiliensis.PteBra_flattened_line_76658           895 10 -      3818 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Otocyon_megalotis.JAEUCK010005147.1                       466179 3 -    559221 I
e Oryctolagus_cuniculus.CM000791.1                       107181400 0 - 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Ondatra_zibethicus.OndZib_scaffold_7387                      632 3336 +    140218 I
e Odobenus_rosmarus.KB229312.1                              508843 3 -   2017862 I
e Octodon_degus.JH651603.1                                  750513 17 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869 0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414 0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947 0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9152752 3 -   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                20309697 3 +  31847680 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Mustela_putorius.JH418006.1                               304037 10 -  14710649 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         8109 3 -      8324 I
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                18000 920 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184766 1004 -  29670104 I
e Mellivora_capensis.MelCap_flattened_line_69365             12726 10 +     13704 I
e Lycaon_pictus.CM007581.1                                17958835 3 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     5119 0 +     14121 I
e Leptonychotes_weddellii.KB714746.1                       3045241 3 +   3914936 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20664195 469 +  22651954 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689 0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Enhydra_lutris.KZ291758.1                               16338962 10 -  41312741 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    39057 4687 +     67921 I
e Desmodus_rotundus.KZ672289.1                             8632254 708 +  20541912 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Crocidura_indochinensis.CroInd_scaffold_37019               6144 44 -     19598 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1255607 4808 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Carollia_perspicillata.CarPer_scaffold_92756                7250 707 -     11696 I
e Canis_lupus_orion.HG994398.1                            18503892 3 +  63665305 I
e Canis_lupus_familiaris.chr16                            17962595 3 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9038119 3 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     3424 3 -     43241 I
e CanFam4.chr16                                           17802678 3 -  60362399 I
e Camelus_ferus.KB017975.1                                  405530 47 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2337232 47 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10004760 47 -  17673402 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6909 705 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         538 0 +      5281 C
e Anoura_caudifer.AnoCau_scaffold_1412                      187499 706 +    412891 I
e Ailurus_fulgens.LNAC01001112.1                             81934 10 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512985 3 -  29979442 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      11283  7 +     62944 T-T-C-A------ATA
s Acinonyx_jubatus.LLWD01001279.1                           830426  7 -   1699592 t-t-t-a------ata
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 7
s Acomys_cahirinus.AcoCah_scaffold_12655                     74525  7 +     87051 T-T-C-A------ACA
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     76091  7 -     89534 T-T-T-A------ATA
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   19884  7 -     52922 T-T-C-A------ATG
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         19815  7 -     28001 T-T-C-A------ATA
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                         10309  7 -     18505 T-T-C-A------ATA
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                          11167  7 -     12518 T-T-C-A------ATA
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             11500  7 +     51355 T-T-T-A------ATA
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                4611  7 -     36483 T-T-T-A------ATA
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              15063  7 +     28687 T-T-T-A------ATA
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 3536  7 +     27940 T-T-T-A------ATA
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            4624  7 -      9457 T-T-T-A------ATA
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             3582  7 +     30492 T-T-T-A------ATA
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              7803  7 +     47717 T-T-T-A------ATA
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              4304  7 +      5663 T-T-T-A------ATA
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             18755  7 +     50774 T-T-T-A------ATA
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          680704  7 -   2318259 T-T-T-A------ATG
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303              1974  7 -     32520 T-T-T-A------ATG
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 C 0
s Aotus_azarae.k141_3104676                                  17296  7 -     33861 T-T-T-A------ACA
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            17294  7 -     34016 T-T-T-A------ACA
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299721  7 -   5030052 t-t-t-a------aca
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             17330  7 -     34685 T-T-T-A------ACA
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               30454  7 -     47192 T-T-T-A------ACA
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      15741  9 +     20879 TTT-T-AA-----ATA
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21211982  7 -  21539123 T-T-T-A------ATA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               46781  7 -     48001 T-T-A-A------ATA
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 29582  7 -     30947 T-T-T-A------ATA
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               11357  7 -     89868 T-T-T-A------ATA
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              15739  7 -     40414 T-T-T-A------ATA
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                23627  7 +     72325 T-T-T-A------ATA
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15195037  7 +  23207421 t-t-t-a------ata
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         5502  7 -     18090 t-t-t-a------ata
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    31784  7 +     34529 T-T-T-A------ATG
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    204419  7 -    288883 t-t-t-a------atg
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20277656  7 +  48749331 t-t-t-a------atg
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1130210  7 -   1948126 t-t-t-a------atg
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18088294  7 +  45695690 t-t-t-a------atg
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2824246  7 +   4408762 t-t-t-a------atg
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                104622  7 -    122966 T-T-T-A------ATA
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   64125  7 +     81800 T-T-T-A------ATA
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  33307  7 -     95584 T-T-T-A------ATA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         57407  7 -    119600 T-T-T-A------ATA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_10318                               1058  7 +     27907 T-C-T-A------ATA
i Callibella_humilis.k141_10318                          C 0 C 0
s Callimico_goeldii.k141_737284                                699  7 -     31217 T-T-T-A------ATA
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                              994  7 +      5377 T-C-T-A------ATA
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592855  7 - 189096842 T-C-T-A------ATA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1669  7 -     12329 T-C-T-A------ATA
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Capra_aegagrus.CM003241.1                               18834734  7 +  46296322 T-T-T-A------ATG
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18065535  7 -  44709034 T-T-T-A------ATG
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    3427 14 -     12242 TTT-T-AATGTATATG
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           158646  7 -    496798 T-T-T-A------ACT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    140191  7 +    179628 T-T-T-C------ATA
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     97202  7 +    217609 T-T-T-A------ATA
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18352008 13 -  23392119 t-t-t-aatatatatg
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18364268 13 -  23407841 t-t-t-aatatatatg
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                       103150 13 +    143979 T-T-T-AATATATATG
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cebuella_pygmaea.k141_793006                                 695  7 -     15088 T-C-T-A------ATA
i Cebuella_pygmaea.k141_793006                           C 0 C 0
s Cebus_albifrons.Contig27                                25654175  7 +  26074798 T-T-T-A------ATA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                2113  7 +     28840 T-T-T-A------ATA
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 1842  7 +     14051 T-T-T-A------ATA
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         8450  7 +     31688 T-T-T-A------ACG
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12234721  7 +  27778364 t-t-t-a------ata
i Ceratotherium_simum.JH767749.1                         C 0 I 9
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5744  7 -     25243 T-T-T-A------ATA
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 I 9
s Cercocebus_atys.KQ010504.1                               4480832  7 +   4669795 T-T-C-A------ATA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        5333  7 +     17872 T-T-C-A------ATA
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           5921  7 -     14043 T-T-C-A------ATA
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          14020  7 +     27781 T-T-C-A------ATA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        14180  7 -     20310 T-T-C-A------ATA
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          17153  7 +     29689 T-T-C-A------ATA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           11912  7 -     20078 T-T-C-A------ATA
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          19826  7 -     27936 T-T-C-A------ATA
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            8699  7 -     17152 T-T-C-A------ATA
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38828426  7 +  39242232 T-T-C-A------ATA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21227931  7 -  21565898 T-T-C-A------ATA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       45043  7 -     53127 T-T-C-A------ATA
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        5304  7 +     13442 T-T-C-A------ATA
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       19846  7 -     27947 T-T-C-A------ATA
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         2874  7 +     10558 T-T-C-A------ATA
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          5877  7 +     14005 T-T-C-A------ATA
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            7453  7 -      8501 C-T-T-A------CTG
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Chiropotes_albinasus.k141_2206961                           2478  7 -     15524 T-T-T-A------ATA
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chiropotes_israelita.k141_747660                          101750  7 +    146308 T-T-T-A------ATA
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          33557  7 -     50570 T-T-T-A------ATA
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18433749  7 -  18827391 T-T-C-A------ATA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       20245  7 -     50209 T-T-C-A------ATA
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135427251  7 + 135778131 T-T-C-A------ATA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1915787  7 +   2368649 t-t-c-a------gta
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199954028  7 + 200372422 T-T-C-A------GTA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              42337  7 +     84244 T-T-C-A------GTA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17552137  7 -  53390261 T-T-T-A------ATT
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           3974  2 +     23735 T-T-------------
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 53751  7 +     63868 T-T-C-A------ATA
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11669520  7 + 224834208 C-T-C-A------ATA
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             31621  7 -     87169 t-t-t-a------ata
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 7
s Ctenodactylus_gundi.CteGun_scaffold_65                    839116 13 +   1526836 T-C-T-AATATGCATG
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  38351 13 +     51376 T-A-T-AATACACATG
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900             2981 13 -     75252 T-T-T-AATATATATG
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            70442  7 +   2246927 C-T-T-A------CCG
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16814912  7 +  35494412 t-t-t-a------ata
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  676563  7 +   1390856 t-t-t-a------ata
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 9
s Diceros_bicornis.DicBicMic_scaffold_5955                    9323  7 +    198055 T-T-T-A------ATA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 9
s Dolichotis_patagonum.DolPat_scaffold_30833                 35700 13 -     42551 T-T-T-AACATATATG
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE797349.1                                    813  7 -     31197 T-T-T-G------GTA
i Eidolon_helvum.KE797349.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       315180  7 +    607251 t-t-t-a------atg
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          24860  7 -    110024 T-C-A-A------ATA
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                            4790  7 +      8657 T-C-A-A------ATA
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2150846  7 -  14770903 T-T-T-G------ATA
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1286856  7 +   4378816 T-T-T-A------GTA
i Equus_asinus.JREZ01000139.1                            C 0 I 9
s Equus_caballus.CM000403.2                               18534665  7 -  39960074 T-T-T-A------GTA
i Equus_caballus.CM000403.2                              C 0 I 9
s Equus_przewalskii.KK951119.1                               36694  7 +    498745 T-T-T-A------GTA
i Equus_przewalskii.KK951119.1                           C 0 I 9
s Erythrocebus_patas.Contig38                             21210421  7 -  21539334 T-T-C-A------ATA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           14339  7 +    133382 T-T-T-A------ATA
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             28288  7 -     44125 T-T-T-A------ATA
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20240202  7 + 206538554 t-t-t-a------ata
i Felis_catus.CM001381.2                                 C 0 I 7
s Felis_catus_fca126.CM031415.1                           20199074  7 + 205367284 t-t-t-a------ata
i Felis_catus_fca126.CM031415.1                          C 0 I 7
s Felis_nigripes.FelNig_flattened_line_20823                 12734  7 -     36744 T-T-T-A------ATA
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 7
s Fukomys_damarensis.KN121974.1                             852779 13 +   3816255 t-t-c-aatATACATG
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               5811  7 -      9135 T-T-T-A------ATA
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     612428  7 -    660261 t-t-t-a------atg
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            35527  8 +     49224 T-T-T-AA-----GTA
i Glis_glis.GliGli_scaffold_19807                        I 229 C 0
s Gorilla_beringei.k141_3596273                              20509  7 -     32273 T-T-C-A------ATA
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186342644  7 + 186649187 T-T-C-A------ATA
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   37153  8 +     78134 T-T-T-AA-----ATA
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               245437  7 +    327341 t-t-t-a------ata
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 7
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 23023  7 +     36099 T-T-T-A------ATG
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               113771  7 +    128679 T-T-T-A------ATA
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       113569  3 +   1711038 t-t-t-----------
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 4
s Hipposideros_galeritus.HipGal_scaffold_101188               2135  3 +      9903 T-T-T-----------
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 I 4
s Hoolock_leuconedys.ctg274                                    440096  7 +    630532 T-T-C-A------ATA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  48404  7 +     55795 T-T-T-A------ATG
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 7
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            27094 13 -    143317 T-T-T-AATATATGCA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      85259 13 +    135385 T-T-T-AATATATATA
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7525305  8 -   7955117 t-t-t-a-----aata
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                2119  7 -     31341 T-T-T-A------ATA
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8278840  7 -   9596543 T-T-T-A------ATA
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                 1858  7 -     18011 T-T-T-A------ATA
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         17800  7 -     38430 T-T-T-A------ATA
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_50988                    19121  7 +     29960 T-T-T-A------ATA
i Lasiurus_borealis.LasBor_scaffold_50988                I 51 I 128
s Leontocebus_fuscicollis.k141_1820339                        9433  7 +     64341 T-T-T-A------ATA
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           1775  7 -     35062 T-T-T-A------ATA
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        9462  7 +     35603 T-T-T-A------ATA
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    31078  7 +     38576 T-T-T-A------ATA
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         27782  7 +     66356 T-T-T-A------ATA
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             271391  7 -    662738 t-t-t-a------ata
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1442381  7 +   1826925 T-T-C-A------ATA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                              12192  7 +     40492 T-T-C-A------ATA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59681442  7 +  60120075 T-T-C-A------ATA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 17988  7 -     26193 T-T-C-A------ATA
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            85763  7 -    114318 T-T-C-A------ATA
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 11454  7 -     23192 T-T-C-A------ATA
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                20919  7 -     29190 T-T-C-A------ATA
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  29498  7 +     37952 T-T-C-A------ATA
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186844571  7 + 187317192 T-T-C-A------ATA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25463152  7 -  25927173 T-T-C-A------ATA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  85356  7 +     89720 T-T-C-A------ATA
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                12368  7 +     20474 T-T-C-A------ATA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  12142  7 -     14993 T-T-C-A------ATA
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  335005  7 -    668171 T-T-C-A------ATA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                10432  7 -     24072 T-T-C-A------ATA
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               31063  7 -     45290 T-T-C-A------ATA
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                  5857  3 +    270270 T-T-T-----------
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 2
s Mandrillus_leucophaeus.scaffold280                      23942654  7 -  24302211 T-T-C-A------ATA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356762  7 +    752769 T-T-C-A------ATA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              21882  7 +    737560 t-c-a-g------ata
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              54024  7 -    317179 T-C-A-A------ATG
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33106388  8 -  40650429 t-t-t-a-----aata
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        16419  3 -    207569 T-T-T-----------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 2
s Meriones_unguiculatus.MerUng_scaffold_7390                 37447  7 +    140813 T-C-C-A------ACA
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    6551  7 +     10310 T-T-T-A------ATA
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Mico_argentatus.k141_1024458                                 694  7 -     20047 T-C-T-A------ATA
i Mico_argentatus.k141_1024458                           C 0 C 0
s Mico_humeralifer.k141_1346949                               1107  7 +      1399 T-C-T-A------ATA
i Mico_humeralifer.k141_1346949                          C 0 C 0
s Mico_schneideri.k141_916733                                        694  7 +      5107 T-C-T-A------ATA
i Mico_schneideri.k141_916733                                  C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1853609  7 +   8254450 t-t-t-g------att
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             37287  7 +     64694 T-T-T-G------ATT
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                          14329  7 -     28506 T-T-C-A------ATA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    30296  7 -    437263 T-T-T-A------ATA
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 144321  7 -    366855 T-T-C-G------GTA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   4610  7 +     82753 T-T-T-A------ATG
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_40893                     438  7 +      5729 t-t-t-a------ata
i Mungos_mungo.MunMun_flattened_line_40893               C 0 I 7
s Murina_feae.MurFea_scaffold_85699                          10568  8 +     14753 T-T-TTT------ATA
i Murina_feae.MurFea_scaffold_85699                      C 0 I 288
s Mus_caroli.LT608237.1                                   84365041  7 - 120012414 T-T-C-A------ATA
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87654445  7 - 129401213 T-T-C-A------ATG
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31359148  7 -  89631738 T-T-C-A------ATA
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90757232  7 - 130317789 T-T-C-A------ATA
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              8781  8 +     14296 T-T-T-AA-----ATA
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     73607 14 -     80779 TTT-T-AAAATATATG
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                284327  7 -  10118263 T-T-T-G------ACA
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1591645  7 -   6019432 T-T-T-G------ACA
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3907746  7 -   4330536 T-T-T-G------ACA
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_44643                         2302  7 +     25416 T-T-T-G------ACA
i Myotis_myotis.MyoMyo_scaffold_44643                    C 0 C 0
s Nannospalax_galili.KL204047.1                            2040010  7 -   3037898 t-t-t-a------atg
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               20394  7 +     21681 T-T-C-A------GTA
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5869261  7 +   7148211 t-t-t-a------ata
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    760542  7 +    783361 T-T-T-G------GTA
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Ochotona_princeps.JH802162.1                             1368006 11 +   3988456 T-T-G-AA--CACACA
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         147986  7 +    630418 t-t-t-a------atg
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          82374  7 -    150152 t-t-t-a------atg
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    84321  7 +    102263 T-T-C-A------ATA
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2785152  7 -  10937097 t-t-t-a------ata
i Orcinus_orca.KB316932.1                                C 0 C 0
s Ovis_aries.CM001607.2                                   17590822  7 +  44047080 T-T-T-A------ATG
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      178973  7 -    191736 T-T-T-A------ATG
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    48631  7 +     80009 T-T-C-A------ATA
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03002948.1                             24553  8 +     28717 t-ttc-a------ata
i Pan_troglodytes.NBAG03002948.1                         I 61 I 86
s Panthera_onca.PanOnc_flattened_line_3271                  154259  7 +    230217 T-T-T-A------ATA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 7
s Panthera_pardus.KV860321.1                                267575  7 +  18783137 t-t-t-a------ata
i Panthera_pardus.KV860321.1                             C 0 I 7
s Panthera_tigris.KE722367.1                               4724395  7 -   8748460 t-t-t-a------ata
i Panthera_tigris.KE722367.1                             C 0 I 7
s Pantholops_hodgsonii.KE114653.1                          1269703  7 -   2937107 t-t-t-a------atg
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183448558  7 + 183742232 C-T-C-A------ATA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            12101  7 +     20448 T-T-C-A------ATA
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20568912  7 +  20919399 T-T-C-A------ATA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                  10858  7 +     41871 T-T-C-A------ATA
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    14136  7 +     27711 T-T-C-A------ATA
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  5135  7 -     11374 T-T-C-A------ATA
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15681  8 -     78924 TTT-T-A------ATA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 7
s Peromyscus_maniculatus.KI615324.1                       18215063  7 -  18517816 T-T-C-A------ATA
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_221660                     1052  4 -      2102 T-T-C-A---------
i Petromus_typicus.PetTyp_scaffold_221660                C 0 I 5
s Phocoena_phocoena.PhoPho_flattened_line_24159              12223  7 +     63832 T-T-T-A------ATA
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            3497  7 +     68526 T-T-C-A------GTA
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        43635  7 +     89929 T-T-C-A------GTA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            45051  7 +     51399 T-T-C-A------GTA
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14301287  7 -  14605196 t-t-c-a------gta
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             5627  7 +     22620 T-T-T-G------ATA
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pithecia_albicans.k141_1476471                              7022  7 +     26961 T-T-T-A------ATA
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          3149  7 +     23417 T-T-T-A------ATA
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                7014  7 +     29694 T-T-T-A------ATA
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          32040  7 +     52772 T-T-T-A------ATA
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           7036  7 +     26198 T-T-T-A------ATA
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3943566  7 +   4542175 T-T-T-A------ATA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            7000  7 -     23490 T-T-T-A------ATA
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610           1763  7 +      7680 T-T-T-A------ATA
i Platanista_gangetica.PlaMin_flattened_line_173610      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       11263  7 -     39866 T-T-T-A------ATA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        20426  7 +     34906 T-T-T-A------ATA
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       24688  7 +     87950 T-T-T-A------ATA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     25515  7 +     88961 T-T-T-A------ATA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         11185  7 +     39403 T-T-T-A------ATA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          24968  7 -     87928 T-T-T-A------ATA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         31930  7 +     60166 T-T-T-A------ATA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      32126  7 +     67232 T-T-T-A------ATA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          27599  7 +     90634 T-T-T-A------ATA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          24972  7 -     89403 T-T-T-A------ATA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189136419  7 + 189387572 T-T-C-A------ATA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9576029  7 +   9816681 T-T-C-A------ATA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               78575  7 -     81375 T-T-C-A------GTA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                             10411  7 +     19060 T-T-C-A------GTA
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            15085  7 -     21651 t-c-c-a------aCA
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            17864  7 -     21811 T-C-T-G------GTA
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteropus_alecto.KB030862.1                              22987260  7 +  28871421 t-t-t-g------acA
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1370820  7 +   4952924 t-t-t-g------atA
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20277462  7 -  38429054 t-t-t-a------ata
i Puma_concolor.QAVW01001104.1                           C 0 I 7
s Pygathrix_cinerea.k141_1153803                             20388  7 -     91421 T-T-C-A------GTG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7614513  7 +   7812017 T-T-C-A------GTG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             20418  7 -     72585 T-T-C-A------GTG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  9824  7 +     55207 T-T-T-A------ATG
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53574475  7 +  90668790 T-T-C-A------ATA
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        370032  3 -   3329780 t-t-t-----------
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 4
s Rhinopithecus_bieti.k119_1041714                             981  7 +      5697 T-T-C-A------GTA
i Rhinopithecus_bieti.k119_1041714                       C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91241454  7 - 195417433 T-T-C-A------GTA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7677103  7 +   7961872 T-T-C-A------GTA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_301684                  92  7 +       280 T-T-T-G------ATA
i Rousettus_aegyptiacus.RouAeg_scaffold_301684           C 0 C 0
s Saguinus_bicolor.k141_8081                                  2743  7 +     42994 T-T-T-A------ATA
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                             1418  7 +      2253 T-T-T-A------ATA
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               1866  7 -      8737 T-T-T-A------ATA
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                              1498  7 +      2343 T-T-T-A------ATA
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209476400  7 + 209938924 T-T-T-A------ATA
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                 825  7 -      7576 T-T-T-A------ATA
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_133311                       2280  7 +      9503 T-T-T-A------ACG
i Saiga_tatarica.SaiTat_scaffold_133311                  C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119952458  7 - 121099817 t-t-t-a------ata
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24800  7 +     46362 T-T-T-A------ATA
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               24895  7 +     45824 T-T-T-A------ATA
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             41574  7 -     64574 T-T-T-A------ATA
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4647  7 -     23631 T-T-T-A------ATA
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 24791  7 -     61129 T-T-T-A------ATA
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5422133  7 -   5703754 T-T-T-A------ATA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          57374  7 -     80660 T-T-T-A------ATA
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    156220  7 -    313613 t-t-t-a------ATT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1672505                         5247  7 -     12572 T-T-C-A------GTA
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      32100  7 +     39453 T-T-C-A------GTA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           12604  7 +     27826 T-T-C-A------GTA
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            12150  7 -     19483 T-T-C-A------GTA
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      5446  7 -     12762 T-T-C-A------GTA
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           5289  7 +     13763 T-T-C-A------GTA
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     4249  7 -     30804 t-T-C-A------ATA
i Sigmodon_hispidus.SigHis_scaffold_42075                I 101 C 0
s Spermophilus_dauricus.KZ294078.1                         1957189  8 -   3870691 t-t-t-a-----aata
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              21705  7 -    196729 t-t-t-a------ata
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 7
s Sus_scrofa.CM000828.4                                    6814798  7 +  69701581 t-t-t-a------ata
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                14388  7 +     41958 T-T-T-T------ACA
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      122037  7 -    156842 T-T-T-A------ATA
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    390516  7 +    539355 T-T-T-A------ATA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               29144  7 +     70052 T-T-T-A------ACT
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                3940  7 -     16117 T-T-T-A------ACT
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186433763  7 + 186847797 T-T-C-A------ATA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              107876  4 +    114563 T-T-C-A---------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 5
s Tolypeutes_matacus.TolMat_scaffold_85600                    5539  7 +     18632 G-T-T-A------CCG
i Tolypeutes_matacus.TolMat_scaffold_85600               C 0 C 0
s Trachypithecus_auratus.k141_722599                         16186  7 -     20410 T-T-C-A------GTA
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      5306  7 -     12674 T-T-C-A------GTA
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       16294  7 +     19930 T-T-C-A------GTA
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      12694  7 -     19997 T-T-C-A------GTA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            52837  7 -     60166 T-T-C-A------GTA
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        20300  7 -     27529 T-T-C-A------GTA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                       1928  7 +      9229 T-T-C-A------GTA
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          13827  7 -     21137 T-T-C-A------GTA
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                    1932  7 +      9131 T-T-C-A------GTA
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                         1891  7 -      3730 T-T-C-A------GTA
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        30160  7 +     32220 T-T-C-A------GTA
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5944258  7 +   6242583 T-T-C-A------GTA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       13515  7 +     20839 T-T-C-A------GTA
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    3703  7 +     27266 T-T-T-A------ATG
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15741404  7 +  33153633 t-t-t-a------ata
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   56306  7 -     77625 T-T-T-A------CTT
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          4224  8 +    224448 T-T-T-AA-----ATA
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      17562  7 +     63895 T-T-T-A------ATA
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_1424488             40  7 -       542 T-T-T-A------ATA
i Ziphius_cavirostris.ZipCav_flattened_line_1424488      C 0 C 0
e Cheracebus_torquatus.k141_1170026                          64344 81 +     76511 I
e Cheracebus_regulus.k141_471822                            159875 81 -    216457 I
e Cheracebus_lugens.k141_1393925                              2308 81 +     17877 I
e Cheracebus_lucifer.k141_49986                               2432 81 -     17098 I
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 14293  3 -     43706 I
e Vicugna_pacos.KN270157.1                                 5374276 47 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4852788  3 -   5085361 I
e Tupaia_tana.TupTan_flattened_line_394                       2684  5 +     70247 I
e Tupaia_chinensis.KB320699.1                              2166320  5 +   4065304 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tonatia_saurophila.TonSau_scaffold_294                     83346 714 +    610378 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             33151 10 +     97271 I
e Sorex_araneus.JH798187.1                                13653314 9235 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Pteronura_brasiliensis.PteBra_flattened_line_76658           895 10 -      3818 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Otocyon_megalotis.JAEUCK010005147.1                       466179  3 -    559221 I
e Oryctolagus_cuniculus.CM000791.1                       107181400  0 - 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Ondatra_zibethicus.OndZib_scaffold_7387                      632 3336 +    140218 I
e Odobenus_rosmarus.KB229312.1                              508843  3 -   2017862 I
e Octodon_degus.JH651603.1                                  750513 17 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9152752  3 -   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                20309697  3 +  31847680 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Mustela_putorius.JH418006.1                               304037 10 -  14710649 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         8109  3 -      8324 I
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                18000 920 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184766 1004 -  29670104 I
e Mellivora_capensis.MelCap_flattened_line_69365             12726 10 +     13704 I
e Lycaon_pictus.CM007581.1                                17958835  3 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     5119  0 +     14121 I
e Leptonychotes_weddellii.KB714746.1                       3045241  3 +   3914936 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20664195 469 +  22651954 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Enhydra_lutris.KZ291758.1                               16338962 10 -  41312741 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    39057 4687 +     67921 I
e Desmodus_rotundus.KZ672289.1                             8632254 708 +  20541912 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Crocidura_indochinensis.CroInd_scaffold_37019               6144 44 -     19598 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1255607 4808 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Carollia_perspicillata.CarPer_scaffold_92756                7250 707 -     11696 I
e Canis_lupus_orion.HG994398.1                            18503892  3 +  63665305 I
e Canis_lupus_familiaris.chr16                            17962595  3 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9038119  3 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     3424  3 -     43241 I
e CanFam4.chr16                                           17802678  3 -  60362399 I
e Camelus_ferus.KB017975.1                                  405530 47 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2337232 47 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10004760 47 -  17673402 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6909 705 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Anoura_caudifer.AnoCau_scaffold_1412                      187499 706 +    412891 I
e Ailurus_fulgens.LNAC01001112.1                             81934 10 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9512985  3 -  29979442 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      11290 15 +     62944 TT--CAGT-GCAATT----------------GCT
s Acinonyx_jubatus.LLWD01001279.1                           830440  1 -   1699592 ---------------------------------t
i Acinonyx_jubatus.LLWD01001279.1                        I 7 I 4645
s Acomys_cahirinus.AcoCah_scaffold_12655                     74532 12 +     87051 TG--TGGT-GC----T--G---G----------C
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 12
s Ailuropoda_melanoleuca.LNAT01000098.1                    9512988  1 -  29979442 ---------------------------------T
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 3 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     76098 12 -     89534 TA--TAAT-CC----T--G-------T------T
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 12
s Allenopithecus_nigroviridis.k141_3361533                   19891 15 -     52922 TG--CAGT-GCAAGT----------------GCT
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         19822 15 -     28001 TG--CAGT-GCAAGT----------------GCT
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                         10316 12 -     18505 TG--CAGT-GCAAGT-------------------
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                          11174 15 -     12518 TG--CAGT-GCAAGT----------------GCT
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             11507 16 +     51355 CA--CAGT-AAAATTT---------------Gct
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                4618 16 -     36483 CA--CAGT-AAAATTT---------------Gct
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              15070 16 +     28687 CA--CAGT-AAAATTT---------------Gct
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 3543 16 +     27940 CA--CAGT-AAAATTT---------------Gct
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            4631 16 -      9457 CA--CAGT-AAAATTT---------------Gct
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             3589 16 +     30492 CA--CAGT-AAAATTT---------------Gct
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              7810 16 +     47717 CA--CAGT-AAAATTT---------------Gct
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              4311 16 +      5663 CA--CAGT-AAAATTT---------------Gct
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             18762 16 +     50774 CA--CAGT-AAAATTT---------------Gct
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          680711 15 -   2318259 TA--TGAT-GC--------AA-----TTGc---t
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303              1981 15 -     32520 TC--TGAT-GC--------AA-----TTGc---t
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 C 0
s Aotus_azarae.k141_3104676                                  17303 16 -     33861 TG--CAGT-AAAATTT---------------GCT
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            17301 16 -     34016 TG--CAGT-AAAATTT---------------GCT
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299728 16 -   5030052 tg--CAGT-AAAATTT---------------GCT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             17337 16 -     34685 TG--CAGT-AAAATTT---------------GCT
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               30461 16 -     47192 TG--CAGT-AAAATTT---------------GCT
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      15750 12 +     20879 CA--TGAT-GC----T--G--C-----------T
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21211989 16 -  21539123 CA--CAGT-AAAATTT---------------Gct
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               46788 16 -     48001 CA--CAGT-AAAATTT---------------Gct
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 29589 16 -     30947 CA--CAGT-AAAATTT---------------Gct
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               11364 16 -     89868 CA--CAGT-AAAATTT---------------Gct
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              15746 16 -     40414 CA--CAGT-AAAATTT---------------Gct
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                23634 16 +     72325 CA--CAGT-AAAATTT---------------Gct
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15195044 15 +  23207421 ta--tgat-gC--------AA-----TTGc---t
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         5509 15 -     18090 ta--tgat-gC--------AA-----TTGc---t
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    31791 15 +     34529 TA--TGGT-GC--------AA-----TTGc---t
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    204426 15 -    288883 ta--tgat-GC--------AA-----TTGc---t
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20277663 15 +  48749331 ta--tgat-GC--------AA-----TTGc---t
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1130217 15 -   1948126 ta--tgat-GC--------AA-----TTGc---t
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18088301 15 +  45695690 ta--tgat-GC--------AA-----TTGc---t
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2824253 15 +   4408762 ta--tgat-GC--------AA-----TTGc---t
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                104629 16 -    122966 CG--CAGT-AAAATTT---------------Gct
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   64132 16 +     81800 CG--CAGT-AAAATTT---------------Gct
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  33314 16 -     95584 CG--CAGT-AAAATTT---------------Gct
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         57414 16 -    119600 CG--CAGT-AAAATTT---------------Gct
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_10318                               1065 16 +     27907 TG--CAGT-AAAATTT---------------GCT
i Callibella_humilis.k141_10318                          C 0 C 0
s Callimico_goeldii.k141_737284                                706 16 -     31217 TG--CAGT-AAAATTT---------------GCT
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                             1001 16 +      5377 TG--CAGT-AAAATTT---------------GCT
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592862 16 - 189096842 TG--CAGT-AAAATTT---------------GCT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1676 16 -     12329 TG--CAGT-AAAATTT---------------GCT
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s CanFam4.chr16                                           17802681  1 -  60362399 ---------------------------------t
i CanFam4.chr16                                          I 3 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     3427  1 -     43241 ---------------------------------t
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 3 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9038122  1 -   9314153 ---------------------------------t
i Canis_lupus_dingo.QKWQ01000480.1                       I 3 C 0
s Canis_lupus_familiaris.chr16                            17962598  1 -  59632846 ---------------------------------t
i Canis_lupus_familiaris.chr16                           I 3 C 0
s Canis_lupus_orion.HG994398.1                            18503895  1 +  63665305 ---------------------------------t
i Canis_lupus_orion.HG994398.1                           I 3 C 0
s Capra_aegagrus.CM003241.1                               18834741 15 +  46296322 TA--TGAT-GC--------AA-----TTGc---t
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18065542 15 -  44709034 TA--TGAT-GC--------AA-----TTGc---t
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    3441 12 -     12242 TA--TGAT-GC----T--G----------c---c
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           158653 15 -    496798 TA--CAGT-GCAATT----------------GCT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    140198  8 +    179628 CA--TGAT-GA-----------------------
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 1
s Catagonus_wagneri.CatWag_scaffold_2839                     97209 15 +    217609 CA--TGAT-GC--------AA-----TTGc---t
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18352021 12 -  23392119 tg--tgaT-GC----T--G--C-----------T
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18364281 12 -  23407841 tg--tgaT-gc----------------tgc---t
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                       103163 12 +    143979 TG--TGAT-gc----------------tgc---t
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cebuella_pygmaea.k141_793006                                 702 16 -     15088 TG--CAGT-AAAATTT---------------GCT
i Cebuella_pygmaea.k141_793006                           C 0 C 0
s Cebus_albifrons.Contig27                                25654182 16 +  26074798 TG--CAGT-AAAATTT---------------GCT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                2120 16 +     28840 TG--CAGT-AAAATTT---------------GCT
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 1849 16 +     14051 TG--CAGT-AAAATTT---------------GCT
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         8457 15 +     31688 TA--CAGT-GCAATT----------------Gct
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12234737  1 +  27778364 ---------------------------------t
i Ceratotherium_simum.JH767749.1                         I 9 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5760  1 -     25243 ---------------------------------t
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 9 C 0
s Cercocebus_atys.KQ010504.1                               4480839 15 +   4669795 TG--CAGT-GCAATT----------------GCT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        5340 15 +     17872 TG--CAGT-GCAATT----------------Gct
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           5928 15 -     14043 TG--CAGT-GCAATT----------------Gct
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          14027 15 +     27781 TG--CAGT-GCAATT----------------Gct
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        14187 15 -     20310 TG--CAGT-GCAAGT----------------GCT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          17160 15 +     29689 TG--CAGT-GCAAGT----------------GCT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           11919 15 -     20078 TG--CAGT-GCAAGT----------------GCT
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          19833 15 -     27936 TG--CAGT-GCAAGT----------------GCT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            8706 15 -     17152 TG--CAGT-GCAAGT----------------GCT
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38828433 15 +  39242232 TG--CAGT-GCAAGT----------------GCT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21227938 15 -  21565898 TG--CAGT-GCAAGT----------------GCT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       45050 15 -     53127 TG--CAGT-GCAAGT----------------GCT
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        5311 15 +     13442 TG--CAGT-GCAAGT----------------GCT
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       19853 15 -     27947 TG--CAGT-GCAAGT----------------GCT
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         2881 15 +     10558 TG--CAGT-GCAAGT----------------GCT
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          5884 15 +     14005 TG--CAGT-GCAAGT----------------GCT
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            7460 15 -      8501 TA--TGGT-GC--------AA-----TTGC---T
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 I 5
s Chiropotes_albinasus.k141_2206961                           2485 16 -     15524 CG--CAGT-AAAATTT---------------GCT
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chiropotes_israelita.k141_747660                          101757 16 +    146308 CG--CAGT-AAAATTT---------------Gct
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          33564 16 -     50570 CG--CAGT-AAAATTT---------------Gct
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18433756 15 -  18827391 TG--CAGT-GCAAGT----------------GCT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       20252 15 -     50209 TG--CAGT-GCAAGT----------------GCT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135427258 15 + 135778131 TG--CAGT-GCAAGT----------------GCT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1915794 15 +   2368649 tG--CAGT-GCAATT----------------GCT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199954035 15 + 200372422 TG--CAGT-GCAATT----------------GCT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              42344 15 +     84244 TG--CAGT-GCAATT----------------GCT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17552144 15 -  53390261 TA--TGAT-AT--------AA-----TTGC---T
i Condylura_cristata.JH655891.1                          C 0 I 5
s Cricetomys_gambianus.CriGam_scaffold_18520                 53758 11 +     63868 TA--T-AT-GC----T--G--C-----------C
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 12
s Cricetulus_griseus.LT883664.1                           11669527 12 + 224834208 TG--TGAT-GT----T--G--C-----------C
i Cricetulus_griseus.LT883664.1                          C 0 I 12
s Cryptoprocta_ferox.CryFer_flattened_line_16129             31635  1 -     87169 ---------------------------------t
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 7 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    839129 12 +   1526836 TA--TGAT-GC----T--G--C-----------T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  38364 12 +     51376 GA--TGAT-GT----T--G--C-----------C
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900             2994 12 -     75252 TA--TGAT-GC----T--G--C-----------T
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            70449 15 +   2246927 CA--GGGC-AC--------A--G---TTGc---t
i Dasypus_novemcinctus.JH564415.1                        C 0 I 5
s Delphinapterus_leucas.KZ290073.1                        16814919 15 +  35494412 ta--tgat-gC--------AA-----TTGc---t
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  676579  1 +   1390856 ---------------------------------t
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 9 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    9339  1 +    198055 ---------------------------------t
i Diceros_bicornis.DicBicMic_scaffold_5955               I 9 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 35713 12 -     42551 TG--TGAT-gc----------------tgc---t
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE797349.1                                    820 15 -     31197 TA--TAAT-AC--------AA-----TTGc---t
i Eidolon_helvum.KE797349.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       315187 15 +    607251 ta--tgaT-GC--------AA-----TTGc---t
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          24867 12 -    110024 CA--TGAT-GC----T--G--C-----------C
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 12
s Ellobius_talpinus.LOJH01081419.1                            4797 12 +      8657 CA--TGAT-GC----T--G--C-----------C
i Ellobius_talpinus.LOJH01081419.1                       C 0 I 12
s Eptesicus_fuscus.JH977646.1                              2150853 15 -  14770903 TG--TAAT-AT--------AA-----TTGC---T
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1286872  1 +   4378816 ---------------------------------t
i Equus_asinus.JREZ01000139.1                            I 9 C 0
s Equus_caballus.CM000403.2                               18534681  1 -  39960074 ---------------------------------t
i Equus_caballus.CM000403.2                              I 9 C 0
s Equus_przewalskii.KK951119.1                               36710  1 +    498745 ---------------------------------t
i Equus_przewalskii.KK951119.1                           I 9 C 0
s Erythrocebus_patas.Contig38                             21210428 15 -  21539334 TG--CAGT-GCAAGT----------------GCT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           14346 15 +    133382 TA--TGAT-GC--------AA-----TTGc---t
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             28295 15 -     44125 TA--TGAT-GC--------AA-----TTGc---t
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20240216  1 + 206538554 ---------------------------------t
i Felis_catus.CM001381.2                                 I 7 C 0
s Felis_catus_fca126.CM031415.1                           20199088  1 + 205367284 ---------------------------------t
i Felis_catus_fca126.CM031415.1                          I 7 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 12748  1 -     36744 ---------------------------------t
i Felis_nigripes.FelNig_flattened_line_20823             I 7 C 0
s Fukomys_damarensis.KN121974.1                             852792 12 +   3816255 TG--TAGT-GC----T--G--C-----------T
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               5818 15 -      9135 CA--CAAT-GC--------AA-----TTGc---t
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     612435 15 -    660261 ta--tgat-GC--------AA-----TTGc---t
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            35535 12 +     49224 TA--AGAT-gc----------------tgc---t
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              20516 15 -     32273 TT--CAGT-GCAATT----------------Gct
i Gorilla_beringei.k141_3596273                          C 0 I 65
s Gorilla_gorilla.LT578341.1                             186342651 15 + 186649187 TT--CAGT-GCAATT----------------GCT
i Gorilla_gorilla.LT578341.1                             C 0 I 65
s Graphiurus_murinus.GraMur_scaffold_10447                   37161 12 +     78134 TA--TGAT-GC----T--G--C-----------T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               245451  1 +    327341 ---------------------------------t
i Helogale_parvula.HelPar_flattened_line_2585            I 7 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 23030 15 +     36099 TA--TGAT-GC--------AA-----TTGc---t
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               113778 15 +    128679 TA--TGAT-GC--------AA-----TTGc---t
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       113576 15 +   1711038 ta--tGAT-GT--------AA-----TTGc---t
i Hipposideros_armiger.JXIK01000431.1                    I 4 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188               2142 15 +      9903 TA--TGAT-GT--------AA-----TTGc---t
i Hipposideros_galeritus.HipGal_scaffold_101188          I 4 C 0
s Hoolock_leuconedys.ctg274                                    440103 15 +    630532 TG--CAGT-GCAATG----------------Gct
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  48418  1 +     55795 ---------------------------------t
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 7 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            27107 12 -    143317 TG--TGAT-gc----------------tgc---t
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      85272 12 +    135385 TA--TGAT-gc----------------tgc---t
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7525313 12 -   7955117 ca--tggt-gc----------------tgc---t
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                2126 15 -     31341 TA--TGAT-GC--------AA-----TTGc---t
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8278847 12 -   9596543 TA--TGAT-GT----T---A------T------T
i Jaculus_jaculus.JH725527.1                             C 0 I 12
s Kogia_breviceps.KogBre_flattened_line_81059                 1865 15 -     18011 TA--TGAT-GC--------AA-----TTGc---t
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         17807 16 -     38430 CA--CAGT-AAAATTT---------------Gct
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    20303 14 -     42476 TG--TAA--AT--------AA-----TTGC---T
i Lasiurus_borealis.LasBor_scaffold_32767                I 7 I 16
s Leontocebus_fuscicollis.k141_1820339                        9440 16 +     64341 CG--CAGT-AAAATTT---------------GCT
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           1782 16 -     35062 CG--CAGT-AAAATTT---------------GCT
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        9469 16 +     35603 CG--CAGT-AAAATTT---------------GCT
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    31085 16 +     38576 TG--CAGT-AAAATTT---------------GCT
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         27789 16 +     66356 TG--CAGT-AAAATTT---------------GCT
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3045244  1 +   3914936 ---------------------------------t
i Leptonychotes_weddellii.KB714746.1                     I 3 C 0
s Lipotes_vexillifer.KE559953.1                             271398 15 -    662738 ta--cgaT-GC--------AA-----TTGc---t
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1442388 15 +   1826925 TG--CAGT-GCAATT----------------Gct
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17958838  1 -  59628241 ---------------------------------t
i Lycaon_pictus.CM007581.1                               I 3 C 0
s Macaca_arctoides.k141_2326796                              12199 15 +     40492 TG--CAGT-GCAATT----------------GCT
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59681449 15 +  60120075 TG--CAGT-GCAATT----------------GCT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 17995 15 -     26193 TG--CAGT-GCAATT----------------GCT
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            85770 15 -    114318 TG--CAGT-GCAATT----------------Gct
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 11461 15 -     23192 TG--CAGT-GCAATT----------------GCT
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                20926 15 -     29190 TG--CAGT-GCAATT----------------GCT
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  29505 15 +     37952 TG--CAGT-GCAATT----------------GCT
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186844578 15 + 187317192 TG--CAGT-GCAATT----------------GCT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25463159 15 -  25927173 TG--CAGT-GCAATT----------------GCT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  85363 15 +     89720 TG--CAGT-GCAATT----------------GCT
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                12375 15 +     20474 TG--CAGT-GCAATT----------------GCT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  12149 15 -     14993 TG--CAGT-GCAATT----------------GCT
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  335012 15 -    668171 TG--CAGT-GCAATT----------------GCT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                10439 15 -     24072 TG--CAGT-GCAATT----------------GCT
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               31070 15 -     45290 TG--CAGT-GCAATT----------------GCT
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                  5862 15 +    270270 TA--TAAT-GT--------AA-----TTGc---t
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 2 C 0
s Mandrillus_leucophaeus.scaffold280                      23942661 15 -  24302211 TG--CAGT-GCAATT----------------Gct
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356769 15 +    752769 TG--CAGT-GCAATT----------------Gct
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              21889  3 +    737560 ta----a---------------------------
i Manis_javanica.JSZB01003497.1                          C 0 I 31
s Manis_pentadactyla.KN006162.1                              54031  3 -    317179 TA----A---------------------------
i Manis_pentadactyla.KN006162.1                          C 0 I 31
s Marmota_marmota.CZRN01000018.1                          33106396 12 -  40650429 ta--tggt-gc----------------tgc---t
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        16424 22 -    207569 CATATGATGGC--------AA--TTGTTGCc--t
i Megaderma_lyra.MegLyr_scaffold_4542                    I 2 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 37454 12 +    140813 TA--TGAT-GC----T--G--C-----------C
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 11
s Mesoplodon_bidens.MesBid_scaffold_108144                    6558 15 +     10310 TA--TGAT-GC--------AA-----TTGc---t
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Mico_argentatus.k141_1024458                                 701 16 -     20047 TG--CAGT-AAAATTT---------------GCT
i Mico_argentatus.k141_1024458                           C 0 C 0
s Mico_humeralifer.k141_1346949                               1114 16 +      1399 TG--CAGT-AAAATTT---------------GCT
i Mico_humeralifer.k141_1346949                          C 0 C 0
s Mico_schneideri.k141_916733                                        701 16 +      5107 TG--CAGT-AAAATTT---------------GCT
i Mico_schneideri.k141_916733                                  C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1853616 15 +   8254450 ta--tgat-GC--------AA-----TTGC---T
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             37294 15 +     64694 TA--TGAT-GC--------AA-----TTGC---T
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                          14336 15 -     28506 TG--CAGT-GCAAGT----------------GCT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         8112  1 -      8324 ---------------------------------t
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 3 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    30303 15 -    437263 TA--TGAT-GC--------AA-----TTGc---t
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 144328 15 -    366855 TA--TGAT-GC--------AA-----TTGc---t
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   4617 15 +     82753 TA--TGAT-GC--------AA-----TTGc---t
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_40893                     452  1 +      5729 ---------------------------------t
i Mungos_mungo.MunMun_flattened_line_40893               I 7 C 0
s Murina_feae.MurFea_scaffold_85699                          10864 15 +     14753 ta--taat-at-------aattG------c---t
i Murina_feae.MurFea_scaffold_85699                      I 288 C 0
s Mus_caroli.LT608237.1                                   84365048 12 - 120012414 TT--CGAT-GC----T--G--C-----------C
i Mus_caroli.LT608237.1                                  C 0 I 12
s Mus_musculus.chr8                                       87654452 12 - 129401213 TT--CGAT-GC----T--G--C-----------C
i Mus_musculus.chr8                                      C 0 I 12
s Mus_pahari.LT608297.1                                   31359155 12 -  89631738 TT--CGAT-CC----T--G--C-----------C
i Mus_pahari.LT608297.1                                  C 0 I 12
s Mus_spretus.CM004101.1                                  90757239 12 - 130317789 TT--CGAT-GC----T--G--C-----------C
i Mus_spretus.CM004101.1                                 C 0 I 12
s Muscardinus_avellanarius.MusAve_scaffold_82313              8789 12 +     14296 TA--TGAT-GC----T--G--C-----------T
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 17
s Myocastor_coypus.MyoCoy_scaffold_10123                     73621 12 -     80779 TA--TGAT-GC----T--G--C-----------C
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                284334 15 -  10118263 TA--TAAT-AT--------AA-----TTGc---t
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1591652 15 -   6019432 TA--TAAT-AT--------AA-----TTGc---t
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3907753 15 -   4330536 TA--TAAT-AT--------AA-----TTGC---T
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_44643                         2309 15 +     25416 TA--TAAT-AT--------AA-----TTGC---T
i Myotis_myotis.MyoMyo_scaffold_44643                    C 0 C 0
s Nannospalax_galili.KL204047.1                            2040017 12 -   3037898 ca--tGAT-GC----------C--A-T------G
i Nannospalax_galili.KL204047.1                          C 0 I 12
s Nasalis_larvatus.k141_413338                               20401 15 +     21681 TG--CAGT-GCAATT----------------GCT
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20309700  1 +  31847680 ---------------------------------t
i Neomonachus_schauinslandi.NINY01007730.1               I 3 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5869268 15 +   7148211 ta--tgat-gC--------AA---A-T-Gc---t
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    760549 15 +    783361 TA--TGAT-GT--------AA-----TTGC---T
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9152755  1 -   9404916 ---------------------------------t
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 3 C 0
s Ochotona_princeps.JH802162.1                             1368017 24 +   3988456 TA--AATT-GC----TTTGAACGCAATTGC---T
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              508846  1 -   2017862 ---------------------------------t
i Odobenus_rosmarus.KB229312.1                           I 3 C 0
s Odocoileus_virginianus.KZ100018.1                         147993 15 +    630418 ta--tgat-GC--------AA-----TTGT---t
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          82381 15 -    150152 ta--tgat-GC--------AA-----TTGc---t
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    84328  6 +    102263 TA--CGAT--------------------------
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 15
s Orcinus_orca.KB316932.1                                  2785159 15 -  10937097 ta--tgat-gC--------AA-----TTGc---t
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       466182  1 -    559221 ---------------------------------t
i Otocyon_megalotis.JAEUCK010005147.1                    I 3 C 0
s Ovis_aries.CM001607.2                                   17590829 15 +  44047080 TA--TGAT-GC--------AA-----TTGc---t
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      178980 15 -    191736 TA--TGAT-GC--------AA-----TTGc---t
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    48638 15 +     80009 TT--CAGT-GCAATT----------------GCT
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189147507 15 + 189151597 tT--CAGT-GCAATT----------------GCT
i Pan_troglodytes.CM009242.2                             I 7 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  154273  1 +    230217 ---------------------------------t
i Panthera_onca.PanOnc_flattened_line_3271               I 7 I 7
s Panthera_pardus.KV860321.1                                267589  1 +  18783137 ---------------------------------t
i Panthera_pardus.KV860321.1                             I 7 I 7
s Panthera_tigris.KE722367.1                               4724409  1 -   8748460 ---------------------------------t
i Panthera_tigris.KE722367.1                             I 7 I 7
s Pantholops_hodgsonii.KE114653.1                          1269710 15 -   2937107 ta--tgat-GC--------AA-----TTGc---t
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183448565 14 + 183742232 TC--CAGT--CAATT----------------GCT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            12108 15 +     20448 TG--CAGT-GCAATT----------------Gct
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20568919 15 +  20919399 TG--CAGT-GCAATT----------------Gct
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                  10865 15 +     41871 TG--CAGT-GCAATT----------------Gct
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    14143 15 +     27711 TG--CAGT-GCAATT----------------Gct
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  5142 15 -     11374 TG--CAGT-GCAATT----------------Gct
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15696  1 -     78924 ---------------------------------t
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 7 C 0
s Peromyscus_maniculatus.KI615324.1                       18215070 12 -  18517816 CA--CGAT-GC----T--G--C-----------C
i Peromyscus_maniculatus.KI615324.1                      C 0 I 12
s Petromus_typicus.PetTyp_scaffold_221660                     1061 10 -      2102 ----TGAC-GT----T--G--C-----------T
i Petromus_typicus.PetTyp_scaffold_221660                I 5 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              12230 15 +     63832 TA--TGAT-GC--------AA-----TTGc---t
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            3504 15 +     68526 TG--CAGT-GCAATT----------------GCT
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        43642 15 +     89929 TG--CAGT-GCAATT----------------GCT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            45058 15 +     51399 TG--CAGT-GCAATT----------------GCT
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14301294 15 -  14605196 tg--CAGT-GCAATT----------------GCT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             5634 15 +     22620 TA--TAAT-GT--------AA-----TTGC---T
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pithecia_albicans.k141_1476471                              7029 16 +     26961 CG--CAGT-AAAATTT---------------GCT
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          3156 16 +     23417 CG--CAGT-AAAATTT---------------GCT
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                7021 16 +     29694 CG--CAGT-AAAATTT---------------GCT
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          32047 16 +     52772 CG--CAGT-AAAATTT---------------GCT
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           7043 16 +     26198 CG--CAGT-AAAATTT---------------GCT
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3943573 16 +   4542175 CG--CAGT-AAAATTT---------------GCT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            7007 16 -     23490 CG--CAGT-AAAATTT---------------GCT
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610           1770 15 +      7680 TA--TGAT-GC--------AA-----TTAc---t
i Platanista_gangetica.PlaMin_flattened_line_173610      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       11270 16 -     39866 CG--CAGT-AAAATTT---------------Gct
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        20433 16 +     34906 CG--CAGT-AAAATTT---------------Gct
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       24695 16 +     87950 CG--CAGT-AAAATTT---------------GCT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     25522 16 +     88961 CG--CAGT-AAAATTT---------------GCT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         11192 16 +     39403 CG--CAGT-AAAATTT---------------Gct
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          24975 16 -     87928 CG--CAGT-AAAATTT---------------GCT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         31937 16 +     60166 CG--CAGT-AAAGTTT---------------Gct
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      32133 16 +     67232 CG--CAGT-AAAATTT---------------GCT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          27606 16 +     90634 CG--CTGT-AAAATTT---------------GCT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          24979 16 -     89403 CG--CAGT-AAAGTTT---------------GCT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189136426 15 + 189387572 TG--CGGT-GCAATT----------------GCT
i Pongo_abelii.CM009266.2                                C 0 I 24607
s Pongo_pygmaeus.ctg66                                     9576036 15 +   9816681 TG--CGGT-GCAATT----------------Gct
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               78582 15 -     81375 TG--CAGT-GCAATT----------------GCT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                             10418 15 +     19060 TG--CAGT-GCAATT----------------GCT
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            15092 12 -     21651 TA--TGCT-GC----T--G--C-----------C
i Psammomys_obesus.NESX01036370.1                        C 0 I 11
s Pteronotus_parnellii.KE909381.1                            17871 15 -     21811 TA--TGAT-GC--------AA-----TTGc---t
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteropus_alecto.KB030862.1                              22987267 15 +  28871421 TA--TAAT-GC--------AA-----TTGc---t
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1370827 15 +   4952924 TA--TAAT-GC--------AA-----TTGc---t
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20277476  1 -  38429054 ---------------------------------t
i Puma_concolor.QAVW01001104.1                           I 7 C 0
s Pygathrix_cinerea.k141_1153803                             20395 15 -     91421 TG--CAGT-GCAATT----------------GCT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7614520 15 +   7812017 TG--CAGT-GCAATT----------------GCT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             20425 15 -     72585 TG--CAGT-GCAATT----------------GCT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  9831 15 +     55207 TA--TGAT-GC--------AA-----TTGT---t
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53574482 12 +  90668790 TT--CGAT-GC--------A--GC---------C
i Rattus_norvegicus.chr16                                C 0 I 12
s Rhinolophus_sinicus.LVEH01000134.1                        370039 15 -   3329780 TA--TGAT-GT--------AA-----TTGc---t
i Rhinolophus_sinicus.LVEH01000134.1                     I 4 C 0
s Rhinopithecus_bieti.k119_1041714                             988 15 +      5697 TG--CAGT-GCAATT----------------GCT
i Rhinopithecus_bieti.k119_1041714                       C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91241461 15 - 195417433 TG--CAGT-GCAATT----------------GCT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7677110 15 +   7961872 TG--CAGT-GCAATT----------------GCT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_301684                  99 15 +       280 TA--TAAT-GC--------AA-----TTGc---c
i Rousettus_aegyptiacus.RouAeg_scaffold_301684           C 0 C 0
s Saguinus_bicolor.k141_8081                                  2750 16 +     42994 CG--CAGT-AAAATTT---------------GCT
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                             1425 16 +      2253 CG--CAGT-AAAATTT---------------GCT
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               1873 16 -      8737 CG--CAGT-AAAATTT---------------GCT
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                              1505 16 +      2343 CG--CAGT-AAAATTT---------------GCT
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209476407 16 + 209938924 CG--CAGT-AAAATTT---------------GCT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                 832 16 -      7576 CG--CAGT-AAAATTT---------------GCT
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_133311                       2287 15 +      9503 TA--TGAT-GC-------GATC--A----c---t
i Saiga_tatarica.SaiTat_scaffold_133311                  C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119952465 16 - 121099817 cg--CAGT-AAAATTT---------------GCT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24807 16 +     46362 CG--CAGT-AAAATTT---------------GCT
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               24902 16 +     45824 CG--CAGT-AAAATTT---------------GCT
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             41581 16 -     64574 CG--CAGT-AAAATTT---------------GCT
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4654 16 -     23631 CG--CAGT-AAAATTT---------------GCT
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 24798 16 -     61129 CG--CAGT-AAAATTT---------------GCT
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5422140 16 -   5703754 TG--CAGT-AAAATTT---------------GTT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          57381 16 -     80660 TG--CAGT-AAAATTT---------------GTT
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    156227 15 -    313613 TA--TGAA-AC--------AA-----TTGC---T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 5
s Semnopithecus_entellus.k141_1672505                         5254 15 -     12572 TG--CAGT-GCAATT----------------GCT
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      32107 15 +     39453 TG--CAGT-GCAATT----------------GCT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           12611 15 +     27826 TG--CAGT-GCAATT----------------GCT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            12157 15 -     19483 TG--CAGT-GCAATT----------------GCT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      5453 15 -     12762 TG--CAGT-GCAATT----------------GCT
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           5296 15 +     13763 TG--CAGT-GCAATT----------------GCT
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     4256 12 -     30804 CA--TGAT-GC----T--G--C-----------C
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 I 76
s Spermophilus_dauricus.KZ294078.1                         1957197 12 -   3870691 ta--tggt-gc----------------tgc---t
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              21719  1 -    196729 ---------------------------------t
i Suricata_suricatta.SurSur_flattened_line_6629          I 7 C 0
s Sus_scrofa.CM000828.4                                    6814805 15 +  69701581 ta--tgat-gC--------AA-----TTGc---t
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                14395 15 +     41958 TC--TGAT-GC--------A--G---TTGC---T
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      122044  5 -    156842 TA--TGA---------------------------
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 5
s Tapirus_terrestris.TapTer_scaffold_755                    390523  5 +    539355 TA--TGA---------------------------
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 5
s Tarsius_lariang.k141_2201908                               29151 15 +     70052 TG--CAGT-GCAATT----------------Gct
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                3947 15 -     16117 TG--CAAT-GCAATT----------------Gct
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186433770 15 + 186847797 TG--CAGT-GCAATT----------------GCT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              107885 10 +    114563 ----AGAC-GC----T--G--C-----------T
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 5 C 0
s Tolypeutes_matacus.TolMat_scaffold_85600                    5546 15 +     18632 TA--TGGT-Ac-------------aactgc---t
i Tolypeutes_matacus.TolMat_scaffold_85600               C 0 I 5
s Trachypithecus_auratus.k141_722599                         16193 15 -     20410 TG--CAGT-GCAATT----------------GCT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      5313 15 -     12674 TG--CAGT-GCAATT----------------GCT
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       16301 15 +     19930 TG--CAGT-GCAATT----------------GCT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      12701 15 -     19997 TG--CAGT-GCGATT----------------GCT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            52844 15 -     60166 TG--CAGT-GCAATT----------------GCT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        20307 15 -     27529 TG--CAGT-GCAATT----------------GCT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                       1935 15 +      9229 TG--CAGT-GCGATT----------------GCT
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          13834 15 -     21137 TG--CAGT-GCAATT----------------GCT
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                    1939 15 +      9131 TG--CAGT-GCGATT----------------GCT
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                         1898 15 -      3730 TG--CAGT-GCAATT----------------GCT
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        30167 15 +     32220 TG--CAGT-GCAATT----------------GCT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5944265 15 +   6242583 TG--CAGT-GCAATT----------------GCT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       13522 15 +     20839 TG--CAGT-GCAATT----------------GCT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    3710 15 +     27266 TA--TGAG-GC--------AA-----TTGc---t
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tupaia_chinensis.KB320699.1                              2166325  1 +   4065304 ---------------------------------T
i Tupaia_chinensis.KB320699.1                            I 5 C 0
s Tupaia_tana.TupTan_flattened_line_394                       2689  1 +     70247 ---------------------------------t
i Tupaia_tana.TupTan_flattened_line_394                  I 5 C 0
s Tursiops_truncatus.MRVK01000835.1                       15741411 15 +  33153633 ta--tgat-gC--------AA-----TTGc---t
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   56313 15 -     77625 TA--TGAT-AC--------AA-----TTGT---T
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 5
s Ursus_maritimus.KK499267.1                               4852791  1 -   5085361 ---------------------------------t
i Ursus_maritimus.KK499267.1                             I 3 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 14296  1 -     43706 ---------------------------------t
i Vulpes_lagopus.VulLag_flattened_line_30954             I 3 C 0
s Xerus_inauris.XerIna_scaffold_2302                          4232 12 +    224448 TA--TGAG-gc----------------tgc---t
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      17569 12 +     63895 TA--TGAT-TC----T-----C----T------T
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 12
s Ziphius_cavirostris.ZipCav_flattened_line_1424488             47 15 -       542 TA--TGAT-GC--------AA-----TTGc---t
i Ziphius_cavirostris.ZipCav_flattened_line_1424488      C 0 C 0
e Cheracebus_torquatus.k141_1170026                          64344 81 +     76511 I
e Cheracebus_regulus.k141_471822                            159875 81 -    216457 I
e Cheracebus_lugens.k141_1393925                              2308 81 +     17877 I
e Cheracebus_lucifer.k141_49986                               2432 81 -     17098 I
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vicugna_pacos.KN270157.1                                 5374276 47 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tonatia_saurophila.TonSau_scaffold_294                     83346 714 +    610378 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             33151 10 +     97271 I
e Sorex_araneus.JH798187.1                                13653314 9235 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Pteronura_brasiliensis.PteBra_flattened_line_76658           895 10 -      3818 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                       107181400  0 - 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Ondatra_zibethicus.OndZib_scaffold_7387                      632 3336 +    140218 I
e Octodon_degus.JH651603.1                                  750513 17 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Mustela_putorius.JH418006.1                               304037 10 -  14710649 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                18000 920 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184766 1004 -  29670104 I
e Mellivora_capensis.MelCap_flattened_line_69365             12726 10 +     13704 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     5119  0 +     14121 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20664195 469 +  22651954 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Enhydra_lutris.KZ291758.1                               16338962 10 -  41312741 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    39057 4687 +     67921 I
e Desmodus_rotundus.KZ672289.1                             8632254 708 +  20541912 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Crocidura_indochinensis.CroInd_scaffold_37019               6144 44 -     19598 I
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           3976  0 +     23735 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1255607 4808 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Carollia_perspicillata.CarPer_scaffold_92756                7250 707 -     11696 I
e Camelus_ferus.KB017975.1                                  405530 47 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2337232 47 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10004760 47 -  17673402 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6909 705 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Anoura_caudifer.AnoCau_scaffold_1412                      187499 706 +    412891 I
e Ailurus_fulgens.LNAC01001112.1                             81934 10 -    347723 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      11305 65 +     62944 GC--CAC------------------------CA-GC-AG----CT----------GTA----T-GGCC--TT-GGCAAGAGC-----CTT-----CCTTCC-T----CT----G--CGTCTTG-----ATTTCC-TC-----------CAAG-G
s Acinonyx_jubatus.LLWD01001279.1                           835086 39 -   1699592 ac--cac------------------------caact-ag----ct----------gtt----t-gact--tt-ggcaagtca-----ctt-----cac--------------------------------------------------------
i Acinonyx_jubatus.LLWD01001279.1                        I 4645 I 22
s Acomys_cahirinus.AcoCah_scaffold_12655                     74556 42 +     87051 --------------------------------------------------------TG----T-GACT--TC-ACCAGGTCC-----CTT-----TCCTAC-C----CT----G--TT------ATTG-TCTCC--------------------
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 12 I 5
s Ailuropoda_melanoleuca.LNAT01000098.1                    9512989 63 -  29979442 GC--CACCAAGTAGTTGTGTGAccttgccaccaagt-ag----tt----------gtg----t-gacc--tt-ggcaagtca-----ttt-----cat--------------------------------------------------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 41
s Ailurus_fulgens.LNAC01001112.1                             81944 22 -    347723 ---------------------------------------------------------G----C--GCT--CT-GACAAGTCA-----TTT-----CAT--------------------------------------------------------
i Ailurus_fulgens.LNAC01001112.1                         I 10 I 41
s Allactaga_bullata.AllBul_scaffold_9566                     76122 49 -     89534 --------------------------------------------------------TA----C-GACC--TC-ACCAAGCCA-----CTT-----CTTT-A-T----CT----A--TA------CCCAGTGTCC-AC-----------CAGA-G
i Allactaga_bullata.AllBul_scaffold_9566                 I 12 C 0
s Allenopithecus_nigroviridis.k141_3361533                   19906 61 -     52922 GC--CAG------------------------CA-CC-AG----CT----------GTG----T-GGCC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--CGTTTTG-----ATTTCC-TC-----------CAAG-G
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         19837 61 -     28001 GC--CAG------------------------CA-CC-AG----CT----------GTG----T-GGCC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--CGTTTTG-----ATTTCC-TC-----------CAAG-G
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                         10328 57 -     18505 ------G------------------------CA-CC-AG----CT----------GTG----T-GGCC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--CATTTTG-----ATTTCC-TC-----------CAAG-G
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                          11189 61 -     12518 GC--CAG------------------------CA-CC-AG----CT----------GTG----T-GGCC--TT-GACATGAGC-----C---------TTCA-T----CT----G--CGTTTTG-----ATTTCC-TC-----------CAAG-G
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             11523 66 +     51355 gc--cac------------------------taacc-ag----ct----------gtg----a-ggcc--tg-gacaagatc-----ctt-----tatccc-t----ct----g--tgttttg-----atttac-tc-----------CAAG-G
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                4634 66 -     36483 gc--cac------------------------taacc-ag----ct----------gtg----a-ggcc--tg-gacaagatc-----ctt-----tatccc-t----ct----g--tgttttg-----atttac-tc-----------CCAC-G
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              15086 66 +     28687 gc--cac------------------------taacc-ag----ct----------gtg----a-ggcc--tg-gacaagatc-----ctt-----tatccc-t----ct----g--tgttttg-----atttac-tc-----------CAAG-G
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 3559 66 +     27940 gc--cac------------------------taacc-ag----ct----------gtg----a-ggcc--tg-gacaagatc-----ctt-----tatccc-t----ct----g--tgttttg-----atttac-tc-----------CCAG-G
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            4647 66 -      9457 gc--cac------------------------taacc-ag----ct----------gtg----a-ggcc--tg-gacaagatc-----ctt-----tatccc-t----ct----g--tgttttg-----atttac-tc-----------CCAG-G
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             3605 66 +     30492 gc--cac------------------------taacc-ag----ct----------gtg----a-ggcc--tg-gacaagatc-----ctt-----tatccc-t----ct----g--tgttttg-----atttac-tc-----------CCAG-G
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              7826 66 +     47717 gc--cac------------------------taacc-ag----ct----------gtg----a-ggcc--tg-gacaagatc-----ctt-----tatccc-t----ct----g--tgttttg-----atttac-tc-----------CAAG-G
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              4327 66 +      5663 gc--cac------------------------taacc-ag----ct----------gtg----a-ggcc--tg-gacaagatc-----ctt-----tatccc-t----ct----g--tgttttg-----atttac-tc-----------CCAG-G
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             18778 66 +     50774 gc--cac------------------------taacc-ag----ct----------gtg----a-ggcc--tg-gacaagatc-----ctt-----tatccc-t----ct----g--tgttttg-----atttac-tc-----------CCAG-G
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          680726 66 -   2318259 ac--cac------------------------tgact-ag----tt----------gtg----t-gacc--tt-ggcaaatcc-----ttt-----catttc-c----tt----g--tg-----ttttgatttcc-tc-----------CAAG-g
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303              1996 66 -     32520 ac--cac------------------------tgact-ag----tt----------gtg----t-gacc--tt-ggcaagtcc-----ttt-----catttc-c----ct----g--tg-----ctttgattttc-GC-----------CAAG-G
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 C 0
s Aotus_azarae.k141_3104676                                  17319 66 -     33861 GC--CAC------------------------CAACC-AG----CT----------GCG----A-GGCC--TT-GACAAGATC-----CTT-----TGTCCC-T----CT----G--TGTTTTG-----ATTTCC-TC-----------CGAG-G
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            17317 66 -     34016 GC--CAC------------------------CAACC-AG----CT----------GCG----A-GGCC--TT-GACAAGATC-----CTT-----TGTCCC-T----CT----G--TGTTTTG-----ATTTCC-TC-----------TGAG-G
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299744 66 -   5030052 GC--CAC------------------------CAACC-AG----CT----------GCG----A-GGCC--TT-GACAAGATC-----CTT-----TGTCCC-T----CT----G--TGTTTTG-----ATTTCC-TC-----------CTAG-G
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             17353 66 -     34685 GC--CAC------------------------CAACC-AG----CT----------GCG----A-GGCC--TT-GACAAGATC-----CTT-----TGTCCC-T----CT----G--TGTTTTG-----ATTTCC-TC-----------CTAG-G
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               30477 66 -     47192 GC--CAC------------------------CAACC-AG----CT----------GCG----A-GGCC--TT-GACAAGATC-----CTT-----TGTCCC-T----CT----G--TGTTTTG-----ATTTCC-TC-----------CTAG-G
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      15762 66 +     20879 GC--CAC------------------------CAACT-TG----AT----------TTG----T-GACC--TC-TCCCAAGCA-----CTT-----CCTTTC-T----CC----A--CA-----CTTCATTTTCG-TC-----------CAAG-G
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21212005 66 -  21539123 gc--cac------------------------taacc-ag----ct----------gtg----a-ggac--tt-gacaagatc-----ctt-----tatccc-a----ct----g--tgttttg-----atttcc-tc-----------CAAG-G
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               46804 66 -     48001 gc--cac------------------------taacc-ag----ct----------gtg----a-ggcc--tt-gacaagatc-----ctt-----tatccc-a----ct----g--tgttttg-----atttcc-tc-----------CAAG-G
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 29605 66 -     30947 gc--cac------------------------taacc-ag----ct----------gtg----a-ggcc--tt-gacaagatc-----ctt-----tatccc-a----ct----g--tgttttg-----atttcc-tc-----------CAAG-G
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               11380 66 -     89868 gc--cac------------------------taacc-ag----ct----------gtg----a-ggac--tt-gacaagatc-----ctt-----tatccc-a----ct----g--tgttttg-----atttcc-tc-----------CAAG-G
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              15762 66 -     40414 gc--cac------------------------taacc-ag----ct----------gtg----a-ggcc--tt-gacaagatc-----ctt-----tatccc-a----ct----g--tgttttg-----atttcc-tc-----------CAAG-G
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                23650 66 +     72325 gc--cac------------------------taacc-ag----ct----------gtg----a-ggcc--tt-gacaagatc-----ctt-----tatccc-a----ct----g--tgttttg-----atttcc-tc-----------CAAG-G
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15195059 66 +  23207421 ac--cac------------------------tgact-ag----tt----------gtg----t-gacc--tt-ggcaagtcc-----ttt-----catttc-g----ct----g--tg-----ttttgatttcc-tc-----------CAAG-G
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         5524 66 -     18090 ac--cac------------------------tgact-ag----tt----------gtg----t-gacc--tt-ggcaagtcc-----ttt-----catttc-g----ct----g--tg-----ttttgatttcc-tc-----------CAAG-G
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    31806 66 +     34529 ac--cac------------------------tgact-ag----tt----------gtg----t-gacc--tt-ggcaaattc-----ttt-----catttc-c----tt----g--tg-----ttttgatttcc-tc-----------CAAG-G
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    204441 66 -    288883 ac--cac------------------------tgact-ag----ct----------gtg----t-gacc--tt-ggcaagtcc-----ttt-----catttc-c----tt----g--tg-----ttttgatttcc-tc-----------CAAG-G
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20277678 66 +  48749331 ac--cac------------------------tgact-ag----ct----------gtg----t-gacc--tt-ggcaagtcc-----ttt-----catttc-c----tt----g--tg-----ttttgatttcc-tc-----------CAAG-G
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1130232 66 -   1948126 ac--cac------------------------tgact-ag----ct----------gtg----t-gacc--tt-ggcaagtcc-----ttt-----catttc-c----tt----g--tg-----ttttgatttcc-tc-----------CAAG-G
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18088316 66 +  45695690 ac--cac------------------------tgact-ag----ct----------gtg----t-gacc--tt-ggcaagtcc-----ttt-----catttc-c----tt----g--tg-----ttttgatttcc-tc-----------CAAG-G
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2824268 66 +   4408762 ac--cac------------------------tgact-ag----ct----------gtg----t-gacc--tt-ggcaagtcc-----ttt-----tatttc-c----tt----g--tg-----ttttgatttcc-tc-----------CAAG-G
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                104645 66 -    122966 gc--cac------------------------taacc-ag----ct----------gtg----a-ggcc--tt-gacaagagc-----ctt-----tatccc-t----ct----g--tgttttg-----atttcc-tc-----------CAAG-g
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   64148 66 +     81800 gc--cac------------------------taacc-ag----ct----------gtg----a-ggcc--tt-gacaagagc-----ctt-----tatccc-t----ct----g--tgttttg-----atttcc-tc-----------CAAG-g
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  33330 66 -     95584 gc--cac------------------------taacc-ag----ct----------gtg----a-ggcc--tt-gacaagagc-----ctt-----tatccc-t----ct----g--tgttttg-----atttcc-tc-----------CAAG-g
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         57430 66 -    119600 gc--cac------------------------taacc-ag----ct----------gtg----a-ggcc--tt-gacaagagc-----ctt-----tatccc-t----ct----g--tgttttg-----atttcc-tc-----------CAAG-g
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_10318                               1081 66 +     27907 GC--CAC------------------------CAACC-AG----CA----------GTG----A-GGCC--TT-GACACGATC-----CTT-----TGTCCC-T----CT----G--TGTTCTG-----ATATCC-TC-----------CATG-G
i Callibella_humilis.k141_10318                          C 0 C 0
s Callimico_goeldii.k141_737284                                722 66 -     31217 GC--CAC------------------------CAACC-AG----CA----------GTG----A-GGCC--TT-GACACGATC-----CTT-----TGTCCC-T----CC----G--TGTTCCG-----ATTTCC-TC-----------CATG-G
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                             1017 66 +      5377 GC--CAC------------------------CAACC-AG----CA----------GTG----A-GGCC--TT-GACACGATC-----CTT-----TGTCCC-T----CT----G--TGTTCTG-----ATATCC-TC-----------CATG-G
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592878 66 - 189096842 GC--CAC------------------------CAACC-AG----CA----------GTG----A-GGCC--TT-GACACGATC-----CTT-----TGCCCC-T----CT----G--TGTTCTG-----ATATCC-TC-----------CATG-G
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1692 66 -     12329 GC--CAC------------------------CAACC-AG----CA----------GTG----A-GGCC--TT-GACACGATC-----CAT-----TGTCCC-T----CT----G--TGTTCTG-----ATATCC-TC-----------CATG-G
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s CanFam4.chr16                                           17802682 39 -  60362399 gc--cac------------------------caact-ag----tt----------atg----t-gacc--tt-ggcaagtca-----ctt-----cat--------------------------------------------------------
i CanFam4.chr16                                          C 0 I 41
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     3428 39 -     43241 gc--cac------------------------caact-ag----tt----------atg----t-gacc--tt-ggcaagtca-----ctt-----cat--------------------------------------------------------
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 I 41
s Canis_lupus_dingo.QKWQ01000480.1                         9038123 39 -   9314153 gc--cac------------------------caact-ag----tt----------atg----t-gacc--tt-ggcaagtca-----ctt-----cat--------------------------------------------------------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 41
s Canis_lupus_familiaris.chr16                            17962599 39 -  59632846 gc--cac------------------------caact-ag----tt----------atg----t-gacc--tt-ggcaagtca-----ctt-----cat--------------------------------------------------------
i Canis_lupus_familiaris.chr16                           C 0 I 41
s Canis_lupus_orion.HG994398.1                            18503896 39 +  63665305 gc--cac------------------------caact-ag----tt----------atg----t-gacc--tt-ggcaagtca-----ctt-----cat--------------------------------------------------------
i Canis_lupus_orion.HG994398.1                           C 0 I 41
s Capra_aegagrus.CM003241.1                               18834756 66 +  46296322 ac--cac------------------------tgact-ag----tt----------gtg----t-gacc--tt-ggcaactcc-----ttt-----catttc-c----tt----g--tg-----ttttgatttcc-tc-----------CAAG-g
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18065557 66 -  44709034 ac--cac------------------------tgact-ag----tt----------gtg----t-gacc--tt-ggcaactcc-----ttt-----catttc-c----tt----g--tg-----ttttgatttcc-tc-----------CAAG-g
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    3453 65 -     12242 ac--cat------------------------ctact-ag----ct----------gtg----t-gacc--tt-aggatgtga-----cta-----cttctccc----c-----a--ca-----ctttggtttcc-tc-----------CAG--G
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           158668 66 -    496798 GC--CAC------------------------Caaca-ag----ct----------gtg----t-gacc--tt-gacaaATCC-----CTT-----CACTTC-T----AT----G--TGTTTTG-----ATTTCC-TC-----------ACAG-G
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    140207 56 +    179628 -------------------------------------ag----ct----------gtg----t-gacc--tc-accaagtca-----ctg-----ccttct-t----ct----g--ta-----ctttggtttcc-tc-----------CAAG-G
i Castor_canadensis.CasCan_scaffold_2074                 I 1 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     97224 66 +    217609 ac--cac------------------------tgact-ag----tt----------gtg----t-gacc--tt-agcaagtcc-----ttt-----cattcc-c----ct----a--tg-----ttttgatttcc-tG-----------CAAG-G
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18352033 65 -  23392119 GC--AAT------------------------ATACT-AT----TT----------GTG----T-AACC--TT-AGGATGTCA-----CTG-----CCTTTC-C----C-----A--CA-----CTTTGATTTCC-TC-----------CAG-GG
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18364293 65 -  23407841 gc--aat------------------------atact-at----tt----------gtg----t-gacc--tt-aggatgtca-----ctg-----cctttc-c----c-----a--ca-----ctttgatttcc-tc-----------CAG-GG
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                       103175 65 +    143979 gc--aat------------------------atact-at----tt----------gtg----t-gacc--tt-aggatgtca-----ctg-----cctttc-c----c-----a--ca-----ctttgatttcc-tc-----------CAG-GG
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cebuella_pygmaea.k141_793006                                 718 66 -     15088 GC--CAC------------------------CAACC-AG----CA----------GTG----A-GGCC--TT-GACACGATC-----CTT-----TGTCCC-T----CT----G--TGTTCTG-----ATATCC-TC-----------CATG-G
i Cebuella_pygmaea.k141_793006                           C 0 C 0
s Cebus_albifrons.Contig27                                25654198 66 +  26074798 GC--CAC------------------------CAACC-AG----CT----------GTG----A-GGcc--tt-gacaagatc-----ctt-----tatccc-t----cc----g--tgttttg-----atttcc-tc-----------caag-g
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                2136 66 +     28840 GC--CAC------------------------CAACC-AG----CT----------GTG----A-GGCC--TT-GACAAGATC-----CTT-----TATCCC-T----CC----G--TGTTTTG-----ATTTCC-TC-----------CAAG-G
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 1865 66 +     14051 GC--CAC------------------------CAACC-AG----CT----------GTG----A-GGCC--TT-GACAAGATC-----CTT-----TATCCC-T----CC----G--TGTTTTG-----ATTTCC-TC-----------CAAG-G
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         8472 66 +     31688 gc--cac------------------------caaca-ag----ct----------gtg----t-gacc--tt-gacaagtcc-----ctt-----cacttc-t----at----g--tgttttg-----atttcc-tc-----------aGAG-G
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12234738 44 +  27778364 gc--tgc------------------------caact-ac----tt----------gtg----t-ggcc--at-ggcaagtca-----ctt-----cacatc-t----c----------------------------------------------
i Ceratotherium_simum.JH767749.1                         C 0 I 38
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5761 44 -     25243 gc--tgc------------------------caact-ac----tt----------gtg----t-ggcc--at-ggcaagtca-----ctt-----cacatc-t----c----------------------------------------------
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 I 38
s Cercocebus_atys.KQ010504.1                               4480854 61 +   4669795 GC--CAc------------------------ca-cc-ag----ct----------gtg----t-ggcc--tt-gacaAGAGC-----C---------TTCA-T----CT----G--GGTTTTG-----ATTTCC-TC-----------CAAG-G
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        5355 61 +     17872 gc--cac------------------------ca-cc-ag----ct----------gtg----t-ggcc--tt-gacaagagc-----c---------ttca-t----ct----g--ggttttg-----atttcc-tc-----------CAAG-g
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           5943 61 -     14043 gc--cac------------------------ca-cc-ag----ct----------gtg----t-ggcc--tt-gacaagagc-----c---------ttca-t----ct----g--ggttttg-----atttcc-tc-----------CAAG-g
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          14042 61 +     27781 gc--cac------------------------ca-cc-ag----ct----------gtg----t-ggcc--tt-gacaagagc-----c---------ttca-t----ct----g--ggttttg-----atttcc-tc-----------CAAG-g
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        14202 61 -     20310 GC--CAG------------------------CA-CC-AG----CT----------GTG----T-GGCC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--CGTTTTG-----ATTTCC-TC-----------CAAG-g
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          17175 61 +     29689 GC--CAG------------------------CA-CC-AG----CT----------GTG----T-GGCC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--CGTTTTG-----ATTTCC-TC-----------CAAG-g
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           11934 61 -     20078 GC--CGG------------------------CA-CC-GG----CT----------GTG----T-GGCC--TT-GACAAGAGC-----C---------TTCA-C----CT----G--CATTTTG-----ATTTCC-TC-----------CGAG-G
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          19848 61 -     27936 GC--CAG------------------------CA-CC-AG----CT----------GTG----T-GGCC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--CGTTTTG-----ATTTCC-TC-----------CAAG-G
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            8721 61 -     17152 GC--CAG------------------------CA-CC-AG----CT----------GTG----C-GGCC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--CGTTTTG-----ATTTCC-TC-----------CAAG-g
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38828448 61 +  39242232 GC--CAG------------------------CA-CC-AG----CT----------GTG----T-GGCC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--CGTTTTG-----ATTTCC-TC-----------CAAG-g
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21227953 61 -  21565898 GC--CAG------------------------CA-CC-AG----CT----------GTG----C-GGCC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--CGTTTTG-----ATTTCC-TC-----------CAAG-g
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       45065 61 -     53127 GC--CAG------------------------CA-CC-AG----CT----------GTG----C-GGCC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--CGTTTTG-----ATTTCC-TC-----------CAAG-g
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        5326 61 +     13442 GC--CAG------------------------CA-CC-AG----CT----------GTG----T-GGCC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--CGTTTTG-----ATTTCC-TC-----------CAAG-g
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       19868 61 -     27947 GC--CAG------------------------CA-CC-AG----CT----------GTG----C-GGCC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--CGTTTTG-----ATTTCC-TC-----------CAGG-g
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         2896 61 +     10558 GC--CAG------------------------CA-CC-AG----CT----------GTG----C-GGCC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--CGTTTTG-----ATTTCC-TC-----------CAAG-g
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          5899 61 +     14005 GC--CAG------------------------CA-CC-GG----CT----------GTG----T-GGCC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--CGTTTTG-----ATTTCC-TC-----------CGAG-G
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            7480 41 -      8501 ----------------------------------------------------------------------TT-GCCAAGACA-----CAC-----CATTTC-T----CT----A--TG-----TTTTCGTCTCC-TC----C------G-----
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       I 5 C 0
s Chiropotes_albinasus.k141_2206961                           2501 66 -     15524 GC--CAC------------------------CAACC-CG----CA----------GTG----A-GGCC--TT-GACACGATC-----CTT-----TGTCCC-T----CC----G--TGTTCTG-----ATTTCC-TC-----------CAAG-G
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chiropotes_israelita.k141_747660                          101773 66 +    146308 gc--cac------------------------taacc-ag----ct----------gtg----a-ggcc--tt-gacaagagc-----ctt-----tatccc-t----ct----g--tgttttg-----atttcc-tc-----------CAAG-g
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          33580 66 -     50570 gc--cac------------------------taacc-ag----ct----------gtg----a-ggcc--tt-gacaagagc-----ctt-----tatccc-t----ct----g--tgttttg-----atttcc-tc-----------CAAG-g
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18433771 61 -  18827391 GC--CAG------------------------CA-CC-AG----CT----------GTG----T-GGCC--TT-GACAAGAGC-----C---------GTCA-T----CT----G--CGTTTTG-----ATTTCC-TC-----------CAAG-G
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       20267 61 -     50209 GC--CAG------------------------CA-CC-AG----CT----------GTG----T-GGCC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--CGTTTTG-----ATTTCC-TC-----------CAAG-G
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135427273 61 + 135778131 GC--CAG------------------------CA-CC-AG----CC----------GTG----T-GGCC--TT-GACATGAGC-----C---------TTCA-T----CT----G--CGTTTTG-----ATTTCC-TC-----------CAAG-G
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1915809 61 +   2368649 GC--CGc------------------------ca-cc-ag----ct----------gtg----t-ggcc--tt-gacaAGAGC-----C---------TTCA-T----CT----G--CGTTTTG-----ATTTCC-TC-----------CAAG-G
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199954050 61 + 200372422 GC--CGC------------------------CA-CC-AG----CT----------GTG----T-GGCC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--CGTTTTG-----ATTTCC-TC-----------CAAG-G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              42359 61 +     84244 GC--CAC------------------------CA-CC-AG----CT----------GTG----T-GGCC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--CGTTTTG-----ATTTCC-TC-----------CAAG-G
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17552164 64 -  53390261 -------------------------------------AA----CT----------GTA----T-CATC--TT-AGCAAgtca-----ttt-----tctttc-c----ct----g--tc-----ttttactttct-ct-gaG-AGT-AGACAA-T
i Condylura_cristata.JH655891.1                          I 5 I 157
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           3976 11 +     23735 ----------------------------------------------------------------------------------------------------------------------------------TCCC-TC-----------CAAG-G
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 53781 49 +     63868 --------------------------------------------------------TG----T-GATG--TC-ACCAAGTCA-----CAT-----CCTTCC-T----CC----A--TT------CTTG-TCTTC-TC-----------TGGG-G
i Cricetomys_gambianus.CriGam_scaffold_18520             I 12 C 0
s Cricetulus_griseus.LT883664.1                           11669551 49 + 224834208 --------------------------------------------------------CG----T-TACT--TC-ACCAAGCCA-----ACC-----TCTTTC-T----CC----A--AT------CTTG-TCTCc-tc-----------tggg-g
i Cricetulus_griseus.LT883664.1                          I 12 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             31636 39 -     87169 ac--cac------------------------cagct-ag----ct----------gtg----t-gact--tt-ggcaagtca-----ctt-----cac--------------------------------------------------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 22
s Ctenodactylus_gundi.CteGun_scaffold_65                    839141 60 +   1526836 GC--CCT------------------------CGGAG-AG----TT----------GCG----T-GACC--TC-AGTCACTCA-----TTT-----CCTTCC-T----CC----C--TG-----CTTTGATTTCC-T------------------
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 1
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  38376 65 +     51376 AC--CAT------------------------CTGCT-AG----TT----------GTG----T-GACC--TT-AGGGCGTGC-----CTA-----CCTTTTCC----C-----A--CA-----CTTTGATTTCC-TC-----------CAG--G
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900             3006 66 -     75252 TC--CAT------------------------CTACT-AG----TT----------GTG----T-GGCC--TT-AGGGTGTCA-----CTA-----CTTTTCCC----C-----A--CA-----CTTTGATTTCC-TC-----------CAG-GG
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            70469 57 +   2246927 -------------------------------------cacctagt----------ggg----t-ggcc--tt-gccaagtcg-----ctc-----cacttc-t----ct----g--ca-----tgttagtctcc-tc----C------g-----
i Dasypus_novemcinctus.JH564415.1                        I 5 C 0
s Delphinapterus_leucas.KZ290073.1                        16814934 66 +  35494412 ac--cac------------------------tgact-ag----ct----------gtg----t-gacc--tt-ggcaagtcc-----ttt-----catttc-c----ct----g--tg-----ttctgatttcc-tc-----------CAAG-G
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  676580 44 +   1390856 gc--cgc------------------------caact-ac----tt----------gtg----t-ggcc--at-ggcaagtca-----ctt-----cacgtc-t----c----------------------------------------------
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 38
s Diceros_bicornis.DicBicMic_scaffold_5955                    9340 44 +    198055 gc--tgc------------------------caact-ac----tt----------gtg----t-ggcc--at-ggcaagtca-----ctt-----cacgtc-t----c----------------------------------------------
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 38
s Dolichotis_patagonum.DolPat_scaffold_30833                 35725 66 -     42551 gc--aat------------------------ctacc-ag----tt----------gtg----t-gacc--tt-aggatgtca-----cta-----cctttcCC----C-----A--CA-----CTTTGACTTCC-TC-----------GAG-GG
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE797349.1                                    835 65 -     31197 gt--cac------------------------caact-aa-----t----------atg----t-gacc--tt-ggcaagcca-----ttt-----catttc-c----ct----g--tg-----ttctggtttcc-tc-----------CAAG-G
i Eidolon_helvum.KE797349.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       315202 66 +    607251 ac--cac------------------------tgact-ag----tt----------gtg----t-cacc--tt-gacaagtcc-----ttt-----ctcttc-c----tt----g--tg-----ttttgatttcc-tc-----------CAAG-G
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          24891 50 -    110024 --------------------------------------------------------TG----T-GGCT--TC-ACCAAGTCa-----ctc-----tttttc-t----cc----a--tt-----ttttt-tctcc-tc-----------tggg-g
i Ellobius_lutescens.LOEQ01008920.1                      I 12 C 0
s Ellobius_talpinus.LOJH01081419.1                            4821 49 +      8657 --------------------------------------------------------TG----T-GACT--TC-ACCAAGTca-----ctc-----tttttc-t----cc----a--tt-----tttt--tctcc-tc-----------tggg-g
i Ellobius_talpinus.LOJH01081419.1                       I 12 C 0
s Enhydra_lutris.KZ291758.1                               16338972 22 -  41312741 ---------------------------------------------------------g----t--gcc--ca-ggcAAGTCA-----TTT-----CAT--------------------------------------------------------
i Enhydra_lutris.KZ291758.1                              I 10 I 41
s Eptesicus_fuscus.JH977646.1                              2150868 65 -  14770903 GC--CAA------------------------CAACT-AG-----T----------GTG----T-GGCC--GT-GGCAAGCCT-----TG-----TCATTTC-C----CT----G--CA-----TTTTGGTTGCC-TC-----------CAAG-G
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1286873 44 +   4378816 gc--cac------------------------caact-ag----gt----------gtg----t-gacc--tt-agcaagtca-----ctt-----catacc-t----c----------------------------------------------
i Equus_asinus.JREZ01000139.1                            C 0 I 38
s Equus_caballus.CM000403.2                               18534682 44 -  39960074 gc--cac------------------------caact-ag----tt----------gtg----t-gacc--tt-ggcaagtca-----ctt-----catacc-t----c----------------------------------------------
i Equus_caballus.CM000403.2                              C 0 I 38
s Equus_przewalskii.KK951119.1                               36711 44 +    498745 gc--cac------------------------caact-ag----tt----------gtg----t-gacc--tt-ggcaagtca-----ctt-----catacc-t----c----------------------------------------------
i Equus_przewalskii.KK951119.1                           C 0 I 38
s Erythrocebus_patas.Contig38                             21210443 61 -  21539334 GC--CAG------------------------CA-CC-AG----CT----------GTG----T-GGCC--TT-GACATGAGC-----C---------TTCA-T----CT----G--CGTTTTG-----ATTTCC-TC-----------CAAG-G
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           14361 66 +    133382 ac--cac------------------------tgact-ag----tt----------atg----t-gacc--tt-ggcaagtcc-----ttt-----catttc-c----ct----g--tg-----ttctgatttcc-tc-----------CAAG-G
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             28310 66 -     44125 ac--cac------------------------tgact-ag----tt----------gtg----t-gacc--tt-ggcaagtcc-----ttt-----catttc-c----ct----g--tg-----ttctgatttcc-tc-----------CAAG-G
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20240217 39 + 206538554 gc--cac------------------------caact-ag----ct----------gtt----t-gact--tt-ggcaagtca-----ctt-----cac--------------------------------------------------------
i Felis_catus.CM001381.2                                 C 0 I 22
s Felis_catus_fca126.CM031415.1                           20199089 39 + 205367284 gc--cac------------------------caact-ag----ct----------gtt----t-gact--tt-ggcaagtca-----ctt-----cac--------------------------------------------------------
i Felis_catus_fca126.CM031415.1                          C 0 I 22
s Felis_nigripes.FelNig_flattened_line_20823                 12749 39 -     36744 gc--cac------------------------caact-ag----ct----------gtt----t-gact--tt-ggcaagtca-----ctt-----cac--------------------------------------------------------
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 22
s Fukomys_damarensis.KN121974.1                             852804 68 +   3816255 GC--CAt------------------------ccact-ag----ct----------gtg----t-gacctctc-AGGATGTCA-----CCA-----CCTCTCCC----C-----A--TA-----CTTTCATTTCC-TC-----------CAGG-A
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               5833 66 -      9135 gt--tac------------------------caact-ag----tc----------atg----g-gatc--tt-ggtaagtca-----ttt-----tatttc-t----ct----g--tg-----tttcaacttcc-tc-----------CAAA-G
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     612450 66 -    660261 gc--cac------------------------tgact-ag----tt----------gtg----t-gacc--tt-ggcaagtcc-----ttt-----catttc-c----tt----g--tg-----ttttgatttcc-tc-----------CAAG-G
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            35547 67 +     49224 gt--cat------------------------caacc-ag----tt----------gtg----t-gacc--tc-accaagtca-----ctt-----cctttc-t----ct----g--cg-----ctttggtttcc-tc----C------CAAG-G
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_2066350                                695 65 +      1742 gc--cac------------------------ca-gc-ag----ct----------gtg----t-ggcc--tt-ggcaagagc-----ctt-----ccttcc-t----ct----g--cgtcttg-----atttcc-tc-----------CAAG-G
i Gorilla_beringei.k141_2066350                          I 26 I 60
s Gorilla_gorilla.CYUI03001204.1                             18123 65 -     63219 gc--cac------------------------ca-gc-ag----ct----------gtg----t-ggcc--tt-ggcaagagc-----ctt-----ccttcc-t----ct----g--cgtcttg-----atttcc-tc-----------CAAG-G
i Gorilla_gorilla.CYUI03001204.1                         I 26 I 60
s Graphiurus_murinus.GraMur_scaffold_10447                   37173 66 +     78134 -C--CAC------------------------CAACC-AG----TT----------GTG----T-GACC--TC-ACCCAGTCA-----CTT-----CCTTTC-T----CT----G--CT-----CTTTGTTTTCC-TC----C------CAAG-G
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               245452 40 +    327341 ac--cac------------------------caactttg----ct----------gtg----t-gact--tt-gggaagtca-----ctt-----cat--------------------------------------------------------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 16
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 23045 66 +     36099 ac--cac------------------------tgact-ag----tt----------gtg----t-gacc--tt-ggcaaatcc-----ttt-----catttc-c----tt----g--tg-----ttttgatttcc-tc-----------CAAG-G
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               113793 66 +    128679 ac--cac------------------------tgact-ag----tt----------gtg----t-gacc--tt-ggcaagtcc-----ttt-----catttc-c----ct----g--tg-----ttttgatttcc-tc-----------CAAA-G
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       113591 65 +   1711038 gc--cac------------------------caact-ag-----t----------gtg----t-gacc--tt-ggcaagcca-----gtt-----catttc-c----ct----g--tg-----ttttggtttcc-tc-----------caca-g
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188               2157 65 +      9903 gc--cac------------------------caact-ag-----t----------gtg----t-gacc--tt-ggcaagcca-----gtt-----catttc-c----ct----g--tg-----ttttggtttcc-tc-----------CACA-G
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 C 0
s Hoolock_leuconedys.ctg274                                    440118 65 +    630532 gc--cac------------------------ca-cc-ag----ct----------gtg----t-ggcc--tt-gacaagagc-----ctt-----ccttcc-t----ct----g--cgtcttg-----atttcc-tc-----------CGAG-A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  48419 39 +     55795 gc--cac------------------------caact-ag----ct----------gtg----t-gact--tt-ggcaagtca-----ctt-----cat--------------------------------------------------------
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 20
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            27119 66 -    143317 ga--aat------------------------ctact-ag----tt----------gtg----t-gacc--tt-agtatgtca-----cta-----cctttcCC----C-----A--CA-----CTTTGACTTCC-TC-----------CAG-GG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      85284 67 +    135385 gc--cat------------------------caact-ag----tt----------gtg----t-gacc--tc-aggatgtca-----ctg-----tctttc-c----c-----ccgta-----ctttgatttcc-tc-----------CAgg-g
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7525325 66 -   7955117 gc--cat------------------------cagct-ag----ct----------agg----t-gacc--tc-accaagcca-----cct-----ctgttc-t----ct----g--ca-----cttcagtttcc-tc-----------CAAG-G
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                2141 66 -     31341 ac--cac------------------------tgact-ag----at----------gtg----t-gacc--tt-ggcaagtcc-----ttt-----catttc-t----ct----g--tg-----tcctgatttcc-tc-----------CAAG-G
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8278871 49 -   9596543 --------------------------------------------------------TA----T-GACC--TC-ACCAAGCCA-----CTT-----CTTT-A-G----TC----A--TA------CGTGGTGTCC-AC-----------CAGA-G
i Jaculus_jaculus.JH725527.1                             I 12 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                 1880 66 -     18011 ac--cgc------------------------tgact-ag----tt----------gtg----t-ggcc--tt-ggcaagtcc-----ttt-----catttc-c----ct----g--tg-----ttctgatttcc-tc-----------CAAG-G
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         17823 66 -     38430 gc--cac------------------------taacc-ag----ct----------gtg----a-ggcc--tt-gacaagatc-----ctt-----tatccc-a----ct----g--tgttttg-----atttcc-tc-----------CAAG-G
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    20333 40 -     42476 ---------------------------------------------------------------------------CAAGCCT-----CAT-----CAATTC-C----CT----G--CA-----CTTTGATTGCC-TC-----------AGAG-G
i Lasiurus_borealis.LasBor_scaffold_32767                I 16 C 0
s Leontocebus_fuscicollis.k141_1820339                        9456 66 +     64341 GC--CAC------------------------CAACC-CG----CA----------GTG----A-GGCC--TT-GACACAATC-----CTT-----TGTCCC-T----CC----G--TGTTCTG-----ATTTCC-TT-----------CAAG-G
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           1798 66 -     35062 GC--CAC------------------------CAACC-CG----CA----------GTG----A-GGCC--TT-GACACAATC-----CTT-----TGTCCC-T----CC----G--TGTTCTG-----ATTTCC-TT-----------CAAG-G
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        9485 66 +     35603 GC--CAC------------------------CAACC-CG----CA----------GTG----A-GGCC--TT-GACACAATC-----CTT-----TGTCCC-T----CC----G--TGTTCTG-----ATTTCC-TT-----------CAAG-G
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    31101 66 +     38576 GC--CGC------------------------CAACC-AG----CG----------GTG----A-GGCC--TT-GACACGATC-----CTT-----TGTCCC-T----CT----G--TGTTCTG-----ATTTCC-TC-----------CATG-G
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         27805 66 +     66356 GC--CAC------------------------CAACC-AG----CG----------GTG----A-GGCC--TT-GACACGATC-----CTT-----TGTCCC-T----CT----G--TGTTCTG-----ATTTCC-TC-----------CATG-G
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3045245 39 +   3914936 gc--cac------------------------caact-ag----tt----------gtg----t-gacc--tt-ggcaagtca-----ctt-----cat--------------------------------------------------------
i Leptonychotes_weddellii.KB714746.1                     C 0 I 41
s Lipotes_vexillifer.KE559953.1                             271413 65 -    662738 ac--cac------------------------tgact-ag-----t----------gtg----t-gacc--tt-ggcaagtcc-----ttt-----catttc-c----ct----a--tg-----ttctgatttcc-tc-----------CAAG-G
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1442403 61 +   1826925 gc--cac------------------------ca-cc-ag----ct----------gtg----t-ggcc--tt-gacaagagc-----c---------ttca-t----ct----g--ggttttg-----atttcc-tc-----------CAAG-g
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17958839 39 -  59628241 gc--cac------------------------caact-ag----tt----------atg----t-gacc--tt-ggcaagtca-----ctt-----cat--------------------------------------------------------
i Lycaon_pictus.CM007581.1                               C 0 I 41
s Macaca_arctoides.k141_2326796                              12214 61 +     40492 GC--CAC------------------------CA-CC-AG----CT----------GTG----T-GGCC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--GGTTTTG-----AGTTCC-TC-----------CAAG-g
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59681464 61 +  60120075 GC--CAC------------------------CA-CC-AG----CT----------GTG----T-GGCC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--GGTTTTG-----AGTTCC-TC-----------CAAG-g
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 18010 61 -     26193 GC--CAC------------------------CA-CC-AG----CT----------GTG----T-GGCC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--GGTTTTG-----AGTTCC-TC-----------CAAG-g
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            85785 61 -    114318 gc--cac------------------------ca-cc-ag----ct----------gtg----t-ggcc--tt-gacaagagc-----c---------ttca-t----ct----g--ggttttg-----agttcc-tc-----------CAAG-g
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 11476 61 -     23192 GC--CAC------------------------CA-CC-AG----CT----------GTG----T-GGCC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--GGTTTTG-----AGTTCC-TC-----------CAAG-g
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                20941 61 -     29190 GC--CAC------------------------CA-CC-AG----CT----------GTG----T-GGCC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--GGTTTTG-----AGTTCC-TC-----------CAAG-g
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  29520 61 +     37952 GC--CAC------------------------CA-CC-AG----CT----------GTG----T-GGCC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--GGTTTTG-----AGTTCC-TC-----------CAAG-g
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186844593 61 + 187317192 GC--CAc------------------------ca-cc-ag----ct----------gtg----t-ggcc--tt-gacaAGAGC-----C---------TTCA-T----CT----G--GGTTTTG-----AGTTCC-TC-----------CAAG-G
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25463174 61 -  25927173 GC--CAc------------------------ca-cc-ag----ct----------gtg----t-ggcc--tt-gacaAGAGC-----C---------TTCA-T----CT----G--GGTTTTG-----AGTTCC-TC-----------CAAG-G
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  85378 61 +     89720 GC--CAC------------------------CA-CC-AG----CT----------GTG----T-GGCC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--GGTTTTG-----AGTTCC-TC-----------CAAG-g
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                12390 61 +     20474 GC--CAC------------------------CA-CC-AG----CT----------GTG----T-GGCC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--GGTTTTG-----AGTTCC-TC-----------CAAG-g
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  12164 61 -     14993 GC--CAC------------------------CA-CC-AG----CT----------GTG----T-GGCC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--GGTTTTG-----AGTTCC-TC-----------CAAG-g
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  335027 61 -    668171 GC--CAC------------------------CA-CC-AG----CT----------GTG----T-GGCC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--GGTTTTG-----AGTTCC-TC-----------CAAG-g
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                10454 61 -     24072 GC--CAC------------------------CA-CC-AG----CT----------GTG----T-GGCC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--GGTTTTG-----AGTTCC-TC-----------CAAG-g
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               31085 61 -     45290 GC--CAC------------------------CA-CC-AG----CT----------GTG----T-GGCC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--GGTTTTG-----AGTTCC-TC-----------CAAG-g
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                  5877 65 +    270270 gc--cac------------------------cagct-ca-----t----------atg----t-gatc--tt-ggcaagcca-----ttt-----catttc-c----ct----g--tg-----ttctggtttcc-tT-----------CAAG-G
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23942676 61 -  24302211 gc--cac------------------------ca-cc-ag----ct----------gtg----t-ggcc--tt-gacaagagc-----c---------ttca-t----ct----g--ggttttg-----atttcc-tc-----------CAAG-G
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356784 61 +    752769 gc--cac------------------------ca-cc-ag----ct----------gtg----t-ggcc--tt-gacaagagc-----c---------ttca-t----ct----g--ggttttg-----atttcc-tc-----------cacg-g
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33106408 66 -  40650429 gc--cat------------------------cagct-ag----ct----------agg----t-gacc--tc-accaagcca-----cct-----ctattc-t----ct----g--ca-----cttaggtttcc-tc-----------CAAG-G
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        16446 64 -    207569 gc--cac------------------------caact-gg-----t----------gta----t-gact--tt-gacaggcca-----ttt-----cattta-c----tc----a--tg-----ttttgttttcc-tc-----------c-ag-g
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             12736 22 +     13704 ---------------------------------------------------------g----t--gcc--cA-GGCAAGTCA-----TTT-----CAT--------------------------------------------------------
i Mellivora_capensis.MelCap_flattened_line_69365         I 10 I 41
s Meriones_unguiculatus.MerUng_scaffold_7390                 37477 49 +    140813 --------------------------------------------------------AG----C-GACT--TG-ACCAAGTCA-----CTT-----CTTTTC-T----CC----A--TC------ATTG-TCTCC-TC-----------TGTG-A
i Meriones_unguiculatus.MerUng_scaffold_7390             I 11 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    6573 66 +     10310 ac--cac------------------------tgact-ag----tt----------gtg----t-gacc--tt-ggcaagtcc-----ttt-----catttc-c----ct----g--tg-----ttctgatttcc-tc-----------CAAG-G
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Mico_argentatus.k141_1024458                                 717 66 -     20047 GC--CAC------------------------CAACC-AG----CA----------GTG----A-GGCC--TT-GACACGATC-----CTT-----TGTCCC-T----CT----G--TGTTCTG-----ATATCC-TC-----------CATG-G
i Mico_argentatus.k141_1024458                           C 0 C 0
s Mico_humeralifer.k141_1346949                               1130 66 +      1399 GC--CAC------------------------CAACC-AG----CA----------GTG----A-GGCC--TT-GACACGATC-----CTT-----TGTCCC-T----CT----G--TGTTCTG-----ATAGCC-TC-----------CATG-G
i Mico_humeralifer.k141_1346949                          C 0 C 0
s Mico_schneideri.k141_916733                                        717 66 +      5107 GC--CAC------------------------CAACC-AG----CA----------GTG----A-GGCC--TT-GACACGATC-----CTT-----TGTCCC-T----CT----G--TGTTCTG-----ATATCC-TC-----------CATG-G
i Mico_schneideri.k141_916733                                  C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1853631 43 +   8254450 GC--CAC------------------------CAACT-AG-----C----------GTG----T-GACC--TT-GGCAGGCCT-----TGT-----CGTTTC-C----C----------------------------------------------
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 16
s Miniopterus_schreibersii.MinSch_scaffold_18080             37309 43 +     64694 GC--CAC------------------------CAACT-AG-----C----------GTG----T-GACC--TT-GGCAGGCCT-----TGT-----CGTTTC-C----C----------------------------------------------
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 16
s Miopithecus_ogouensis.k141_534055                          14351 61 -     28506 GC--CAG------------------------CA-CC-AG----CT----------GTG----T-GGCC--TT-GACAAGAGC-----C---------TTCG-T----CT----G--CGTTTTG-----ATCTCC-TC-----------CAAG-G
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         8113 39 -      8324 gc--cac------------------------caact-ag----tt----------gtg----t-gacc--tt-ggcaagtca-----ctt-----cat--------------------------------------------------------
i Mirounga_angustirostris.MirAng_flattened_line_93702    C 0 I 41
s Monodon_monoceros.MonMon_M_scaffold_103                    30318 66 -    437263 ac--cac------------------------tgact-ag----ct----------gtg----t-gacc--tt-ggcaagtcc-----ttt-----catttc-c----ct----g--tg-----ttctgatttcc-tc-----------CAAG-G
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 144343 60 -    366855 gc--cac------------------------caaat-ag-----c----------gtg----t-gacc--at-agcaagcct-----t----------ttc-c----ct----g--tg-----tttcggtttcc-tc-----------CAAG-G
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   4632 66 +     82753 ac--cac------------------------tgact-ag----tt----------gtg----t-gacc--tt-ggcaagttc-----gtt-----catttc-c----tt----g--tg-----ttttgatttcc-tc-----------CAAG-G
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_40893                     453 40 +      5729 ac--cac------------------------caactttg----ct----------gtg----t-gact--tt-gggaagtca-----ctt-----cat--------------------------------------------------------
i Mungos_mungo.MunMun_flattened_line_40893               C 0 I 22
s Murina_feae.MurFea_scaffold_85699                          10879 65 +     14753 gc--caa------------------------caact-ag-----t----------gtg----t-ggcc--tt-ggcaagcct-----tgt-----tatttc-c----ct----g--ca-----ttttggtttcc-tc-----------CAAG-G
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84365072 30 - 120012414 --------------------------------------------------------TG----T-GAAG--TC-ATCAACTCA-----TTT-----CGTTTCCC----C----------------------------------------------
i Mus_caroli.LT608237.1                                  I 12 I 16
s Mus_musculus.chr8                                       87654476 30 - 129401213 --------------------------------------------------------TG----T-GAAG--TC-ATCAACCCA-----CTT-----CGTTTCCC----C----------------------------------------------
i Mus_musculus.chr8                                      I 12 I 16
s Mus_pahari.LT608297.1                                   31359179 29 -  89631738 --------------------------------------------------------TG----T-GAAG--TG-ACCAACTCA-----CTT-----CATTTC-C----C----------------------------------------------
i Mus_pahari.LT608297.1                                  I 12 I 16
s Mus_spretus.CM004101.1                                  90757263 30 - 130317789 --------------------------------------------------------TG----T-GAAG--TC-ATCAACCCA-----CTT-----CGTTTCCC----C----------------------------------------------
i Mus_spretus.CM004101.1                                 I 12 I 16
s Muscardinus_avellanarius.MusAve_scaffold_82313              8818 46 +     14296 -----------------------------------------------------------------A----TC-ACCAAGTCA-----CTT-----CCTTTC-T----CT----G--TG-----CTTTGGTTTCT-TC----C------CAAG-G
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 17 C 0
s Mustela_putorius.JH418006.1                               304047 22 -  14710649 ---------------------------------------------------------g----t--gcc--ca-ggcaagtca-----ttt-----cat--------------------------------------------------------
i Mustela_putorius.JH418006.1                            I 10 I 41
s Myocastor_coypus.MyoCoy_scaffold_10123                     73633 65 -     80779 AG--CGT------------------------GTACC-AG----TT----------GTG----T-GACC--TT-AGAACATGA-----CTA-----CCTCTCCC----C-----A--TA-----CTTCGATGTCC-TC-----------CAG--G
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                284349 65 -  10118263 gc--caa------------------------caact-ag-----t----------gtg----t-ggcc--tt-ggcaagcct-----tgc-----catttc-c----ct----g--ca-----ttttggtttcc-tc-----------CAAG-G
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1591667 65 -   6019432 gc--caa------------------------caact-ag-----t----------gtg----t-ggcc--tt-ggcaagcct-----tgt-----catttc-c----ct----g--ca-----ttttgggttcc-tc-----------CGAG-G
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3907768 65 -   4330536 GC--CAA------------------------CAATG-AG-----T----------GTG----T-GGCC--TT-GGCAAGCCT-----TGC-----CATTTC-C----CT----G--CA-----TTTTGGTTTCC-TC-----------CAAG-G
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_44643                         2324 65 +     25416 GC--CAA------------------------CAACT-AG-----T----------GTG----T-GGCC--TT-GGCAAGCCT-----TGT-----CATTCC-C----CT----G--CA-----TTTTGGTTTCC-TC-----------CAAG-G
i Myotis_myotis.MyoMyo_scaffold_44643                    C 0 C 0
s Nannospalax_galili.KL204047.1                            2040041 40 -   3037898 --------------------------------------------------------TA----T-AACC--AC-ACCAAGCTA-----CTT-----CCCTTC-T----TC----T--TA------CTTG-ACT----------------------
i Nannospalax_galili.KL204047.1                          I 12 C 0
s Nasalis_larvatus.k141_413338                               20416 61 +     21681 GC--CAC------------------------CA-CC-AG----CT----------GTG----T-GGTC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--CGTTTGG-----ATTTCC-TC-----------CAAG-G
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20309701 39 +  31847680 gc--cac------------------------caact-ag----tt----------gtg----t-gacc--tt-ggcaagtca-----ctt-----cat--------------------------------------------------------
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 41
s Neophocaena_asiaeorientalis.KZ687982.1                   5869283 66 +   7148211 ac--cac------------------------tgact-ag----tt----------gtg----t-gacc--tt-ggcaagtcc-----ttt-----catttc-c----ct----g--tg-----ttctgatttcc-tc-----------CAAG-G
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    760564 64 +    783361 GC--CAT------------------------CAAGT-AG-----C----------ATG----T-GAGT--CT-GGCCATCTT-----T-T-----CATTTC-C----CT----G--TG-----TTCTGGTTTCC-TC-----------CAAG-G
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9152756 39 -   9404916 gc--cac------------------------caact-ag----tt----------acg----t-gacc--tt-ggcaagtca-----ctt-----cat--------------------------------------------------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 41
s Ochotona_princeps.JH802162.1                             1368041 66 +   3988456 TC--CAC------------------------CAAAT-GG----TT----------AAG----T-GACA--TA-GGCAAGTCA-----CTA-----CATTTT-T----TT----A--TG-----TACTGTTGTTC-TC-----------TAAG-A
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              508847 39 -   2017862 gc--cac------------------------caact-ag----tt----------gtg----g-gacc--tt-tgcaagtca-----ctt-----cat--------------------------------------------------------
i Odobenus_rosmarus.KB229312.1                           C 0 I 41
s Odocoileus_virginianus.KZ100018.1                         148008 66 +    630418 ac--cac------------------------tgact-ag----ct----------gtg----t-cacc--tt-gacaagtcc-----ttt-----catttc-c----tt----g--tg-----ttttgatttcc-tc-----------CAAG-G
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          82396 66 -    150152 ac--cac------------------------tgact-ag----tt----------gtg----t-gacc--tt-ggcaagtcc-----ttt-----catttc-c----tt----g--ta-----ttttgattttc-tc-----------CAAG-G
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    84349 49 +    102263 --------------------------------------------------------GG----T-GACT--TC-ACCAAGGCA-----CTC-----CCTTCC-T----CC----A--TT------CATG-CCCTC-TC-----------TGGG-G
i Onychomys_torridus.OnyTor_scaffold_2986                I 15 C 0
s Orcinus_orca.KB316932.1                                  2785174 66 -  10937097 at--cac------------------------tgact-ag----tt----------gtg----t-gacc--tt-ggcaagtcc-----ttt-----catttc-c----ct----g--tg-----ttctgatttcc-tc-----------CAAG-G
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       466183 39 -    559221 gc--cac------------------------caact-ag----tt----------atg----t-ggcc--tt-ggcaagtca-----ctt-----cat--------------------------------------------------------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 41
s Ovis_aries.CM001607.2                                   17590844 66 +  44047080 ac--cac------------------------tgact-ag----tt----------gtg----t-gacc--tt-ggcaaatcc-----ttt-----catttc-c----ct----g--tg-----ttttgatttcc-tc-----------caag-g
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      178995 66 -    191736 ac--cac------------------------tgact-ag----tt----------gtg----t-gacc--tt-ggcaaatcc-----ttt-----catttc-c----tt----g--tg-----ttttgatttcc-tc-----------CAAG-g
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    48653 65 +     80009 GC--CAC------------------------ca-gc-ag----ct----------gtg----t-ggcc--tt-ggcaaGAGC-----CTT-----CCTTCC-T----CT----G--CGTCTTG-----ATTTCT-TC-----------CAAG-G
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189147522 66 + 189151597 GC--CAC------------------------ca-gc-ag----ct----------gtg----t-ggcc--tt-ggcaaGAGC-----CTT-----CTTTCC-T----CT----G--CGTCTTG-----ATTTTCTTC-----------CAAG-G
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  154281 29 +    230217 -------------------------------------ag----ct----------gtt----t-gact--tt-ggcaagtca-----ctt-----cac--------------------------------------------------------
i Panthera_onca.PanOnc_flattened_line_3271               I 7 I 22
s Panthera_pardus.KV860321.1                                267597 29 +  18783137 -------------------------------------ag----ct----------gtt----t-gact--tt-ggcaagtca-----ctt-----cac--------------------------------------------------------
i Panthera_pardus.KV860321.1                             I 7 I 22
s Panthera_tigris.KE722367.1                               4724417 29 -   8748460 -------------------------------------ag----ct----------gtt----t-gact--tt-ggcaagtca-----ctt-----cac--------------------------------------------------------
i Panthera_tigris.KE722367.1                             I 7 I 22
s Pantholops_hodgsonii.KE114653.1                          1269725 66 -   2937107 ac--cac------------------------tgact-ag----tt----------gtg----t-gacc--tt-ggcaaatcc-----ttt-----catttc-c----tt----g--tg-----ttttgatttcc-tc-----------CAAG-g
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183448579 74 + 183742232 TCGGCAC------------------------CA-CCCAG----CT----------GTGAGAGT-GGCC--TTCGACAAGAGC----GC---------TTCA-ATAGACT----G--GGTTTTG-----ATTTCC-TC-----------CAAG-G
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            12123 61 +     20448 gc--cac------------------------ca-cc-ag----ct----------gtg----t-ggcc--tt-gacaagagc-----c---------ttca-t----ct----g--ggttttg-----atttcc-tc-----------CAAG-g
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20568934 61 +  20919399 gc--cac------------------------ca-cc-ag----ct----------gtg----t-ggcc--tt-gacaagagc-----c---------ttca-t----ct----g--ggttttg-----atttcc-tc-----------CAAG-g
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                  10880 61 +     41871 gc--cac------------------------ca-cc-ag----ct----------gtg----t-ggcc--tt-gacaagagc-----c---------ttca-t----ct----g--ggttttg-----atttcc-tc-----------CAAG-g
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    14158 61 +     27711 gc--cac------------------------ca-cc-ag----ct----------gtg----t-ggcc--tt-gacaagagc-----c---------ttca-t----ct----g--ggttttg-----atttcc-tc-----------CAAG-g
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  5157 61 -     11374 gc--cac------------------------ca-cc-ag----ct----------gtg----t-ggcc--tt-gacaagagc-----c---------ttca-t----ct----g--ggttttg-----atttcc-tc-----------CAAG-g
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15697 39 -     78924 gc--cac------------------------caact-ag----ct----------ttg----t-gact--tt-ggcaagtca-----ctt-----cat--------------------------------------------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 22
s Peromyscus_maniculatus.KI615324.1                       18215094 49 -  18517816 --------------------------------------------------------GG----T-GACT--TA-ACCAAGtca-----ctc-----ccttcc-t----cc----a--tt------cATG-TCTTC-TC-----------TGGG-A
i Peromyscus_maniculatus.KI615324.1                      I 12 C 0
s Petromus_typicus.PetTyp_scaffold_221660                     1071 41 -      2102 GC--TTT------------------------CAGCT-AG----CT----------GTG----T-GACCTCT----GGCTTCA-----TTA-----CCTCTC-----------------------------------------------------
i Petromus_typicus.PetTyp_scaffold_221660                C 0 I 23
s Phocoena_phocoena.PhoPho_flattened_line_24159              12245 66 +     63832 ac--cac------------------------tgact-ag----tt----------gtg----t-gacc--tt-ggcaagtcc-----ttt-----catttc-c----ct----g--tg-----ttctgatttcc-tc-----------CAAG-G
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            3519 62 +     68526 GC--CAC------------------------CA-CC-AG----CT----------GTG---TT-GGCC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--CGTTTTG-----ATTTCC-TC-----------CAAG-g
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        43657 61 +     89929 GC--CAC------------------------CA-CC-AG----CT----------GTG----T-GGCC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--CGTTTTG-----ATTTCC-TC-----------CAAG-g
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            45073 61 +     51399 GC--CAC------------------------CA-CC-AG----CT----------GTG----T-GGCC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--CGTTTTG-----ATTTCC-TC-----------CAAG-g
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14301309 61 -  14605196 GC--CAc------------------------ca-cc-ag----ct----------gtg----t-ggcc--tt-gacaAGAGC-----C---------TTCA-T----CT----G--CGTTTTG-----ATTTCC-TC-----------CAAG-G
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             5649 64 +     22620 GC--CAA------------------------CAACT-AG-----T----------GTG----T-GGCC--TC-GGTAGGCCT-----TG------CATTTC-C----CT----G--CA-----TTCTGGTTGCC-TC-----------CAAG-G
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pithecia_albicans.k141_1476471                              7045 66 +     26961 GC--CAT------------------------TAACC-AG----CT----------GTG----A-GGCC--TT-GACAAGATC-----CTT-----TATCCC-T----CT----G--TGTTTTG-----ATTTCC-TC-----------CAAG-g
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          3172 66 +     23417 GC--CAT------------------------TAACC-AG----CT----------GTG----A-GGCC--TT-GACAAGATC-----CTT-----TATCCC-T----CT----G--TGTTTTG-----ATTTCC-TC-----------CAAG-g
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                7037 66 +     29694 GC--CAT------------------------TAACC-AG----CT----------GTG----A-GGCC--TT-GACAAGATC-----CTT-----TATCCC-T----CT----G--TGTTTTG-----ATTTCC-TC-----------CAAG-G
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          32063 66 +     52772 GC--CAT------------------------TAACC-AG----CT----------GTG----A-GGCC--TT-GACAAGATC-----CTT-----TATCCC-T----CT----G--TGTTTTG-----ATTTCC-TC-----------CAAG-g
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           7059 66 +     26198 GC--CAT------------------------TAACC-AG----CT----------GTG----A-GGCC--TT-GACAAGATC-----CTT-----TATCCC-T----CT----G--TGTTTTG-----ATTTCC-TC-----------CAAG-g
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3943589 66 +   4542175 GC--CAT------------------------TAACC-AG----CT----------GTG----A-GGCC--TT-GACAAGATC-----CTT-----TATCCC-T----CT----G--TGTTTTG-----ATTTCC-TC-----------CAAG-g
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            7023 66 -     23490 GC--CAT------------------------TAACC-AG----CT----------GTG----A-GGCC--TT-GACAAGATC-----CTT-----TATCCC-T----CT----G--TGTTTTG-----ATTTCC-TC-----------CAAG-g
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610           1785 66 +      7680 ac--cac------------------------tgact-ag----tt----------gtg----t-gacc--tt-ggcaagtcc-----ttt-----cattta-c----ct----g--tg-----ttctgatttcc-tc-----------CAAG-G
i Platanista_gangetica.PlaMin_flattened_line_173610      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       11286 64 -     39866 gc--cac------------------------taacc-ag----ct----------ggg----a-ggcc--tt-gacaagatc-----c-t-----tatccc-t----ct----g--tgtcttg-----a-ttcc-tc-----------caAG-G
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        20449 64 +     34906 gc--cac------------------------taacc-ag----ct----------ggg----a-ggcc--tt-gacaagatc-----c-t-----tatccc-t----ct----g--tgtcttg-----a-ttcc-tc-----------caAG-G
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       24711 64 +     87950 GC--CAC------------------------TAACC-AG----CT----------GGG----A-GGcc--tt-gacaagatc-----c-t-----tatccc-t----ct----g--tgtcttg-----a-ttcc-tc-----------caag-g
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     25538 64 +     88961 GC--CAC------------------------TAACC-AG----CT----------GGG----A-GGcc--tt-gacaagatc-----c-t-----tatccc-t----ct----g--tgtcttg-----a-ttcc-tc-----------caag-g
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         11208 64 +     39403 gc--cac------------------------taacc-ag----ct----------ggg----a-ggcc--tt-gacaagatc-----c-t-----tatccc-t----ct----g--tgtcttg-----a-ttcc-tc-----------caAG-G
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          24991 64 -     87928 GC--CAC------------------------TAACC-AG----CT----------GGG----A-GGcc--tt-gacaagatc-----c-t-----tatccc-t----ct----g--tgtcttg-----a-ttcc-tc-----------caag-g
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         31953 64 +     60166 gc--cac------------------------taacc-ag----ct----------ggg----a-ggcc--tt-gacaagatc-----c-t-----tatccc-t----ct----g--tgtcttg-----a-ttcc-tc-----------caAG-G
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      32149 64 +     67232 GC--CAC------------------------TAACC-AG----CT----------GGG----A-GGcc--tt-gacaagatc-----c-t-----tatccc-t----ct----g--tgtcttg-----a-ttcc-tc-----------caag-g
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          27622 64 +     90634 GC--CAC------------------------TAACC-AG----CT----------GGG----A-GGcc--tt-gacaagatc-----c-t-----tatccc-t----ct----g--tgtcttg-----a-ttcc-tc-----------caag-g
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          24995 64 -     89403 GC--CAC------------------------TAACC-AG----CT----------GGG----A-GGcc--tt-gacaagatc-----c-t-----tatccc-t----ct----g--tgtcttg-----a-ttcc-tc-----------caag-g
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189161048 66 + 189387572 GC--CAC------------------------CA-CC-AG----CT----------GTG----TGGGCC--TT-GACAAGAGC-----CTT-----CCTTCC-T----CT----G--AGTCTTG-----ATTTCC-TC-----------CAAG-G
i Pongo_abelii.CM009266.2                                I 24607 T 24608
s Pongo_pygmaeus.ctg66                                     9576051 65 +   9816681 gc--cac------------------------ca-cc-ag----ct----------gtg----t-ggcc--tt-gacaagagc-----ctt-----ccttcc-t----ct----g--agtcttg-----atttcc-tc-----------CAAG-G
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               78597 61 -     81375 GC--CAC------------------------CA-CC-AG----CT----------GTG----C-GGTC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--CGTTTTG-----ATTTCC-TC-----------CAAG-G
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                             10433 61 +     19060 GC--CAC------------------------CA-CC-AG----CT----------GTG----C-GGTC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--CGTTTTG-----ATTTCC-TC-----------CAAG-g
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            15115 45 -     21651 --------------------------------------------------------AG----C-GACT--TG-ACCAAGTCG-----CTT-----CTTTTC-T----CC----A--TC------ATTG-TCTCT-TC-------------T---
i Psammomys_obesus.NESX01036370.1                        I 11 I 2
s Pteronotus_parnellii.KE909381.1                            17886 65 -     21811 gc--cac------------------------caaat-ag-----g----------gtg----t-gact--gt-ggcaaacct-----t--ttctt---ttc-c----ct----a--tg-----tttcggtttcc-tc-----------CAAC-G
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_76658           905 22 -      3818 ---------------------------------------------------------g----t--gcc--TA-GGCAAGTCA-----TTT-----CAT--------------------------------------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_76658     I 10 I 41
s Pteropus_alecto.KB030862.1                              22987282 65 +  28871421 gc--cac------------------------caact-aa-----t----------atg----t-gacc--tt-ggcaagcca-----ttt-----catttc-c----ct----g--tg-----ttctggtttcc-tc-----------CAAG-G
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1370842 65 +   4952924 gc--cac------------------------caact-aa-----t----------atg----t-gacc--tt-ggcaagcca-----ttt-----catttc-c----ct----g--tg-----ttctggtttcc-tc-----------CAAG-G
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20277477 39 -  38429054 cc--cac------------------------caact-ag----ct----------gtt----t-gact--tt-ggtaagtca-----ctt-----cac--------------------------------------------------------
i Puma_concolor.QAVW01001104.1                           C 0 I 22
s Pygathrix_cinerea.k141_1153803                             20410 61 -     91421 GC--CAC------------------------CA-CC-AG----CT----------GTG----T-GGTC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--TGTTTGG-----ATTTCC-TC-----------CAAG-G
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7614535 61 +   7812017 GC--CAC------------------------CA-CC-AG----CT----------GTG----T-GGTC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--TGTTTGG-----ATTTCC-TC-----------CAAG-G
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             20440 61 -     72585 GC--CAC------------------------CA-CC-AG----CT----------GTG----T-GGTC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--TGTTTGG-----ATTTCC-TC-----------CAAG-G
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  9846 66 +     55207 at--cac------------------------tgact-ag----ct----------gtg----t-cacc--tt-gacaagtcc-----ttt-----catttc-c----tt----g--tg-----ttttgatttcc-tc-----------CAAG-G
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53574506 29 +  90668790 --------------------------------------------------------TG----T-GATA--TC-AACAACTCA-----CCT-----TGTTTC-C----C----------------------------------------------
i Rattus_norvegicus.chr16                                I 12 I 16
s Rhinolophus_sinicus.LVEH01000134.1                        370054 47 -   3329780 gc--cac------------------------caact-ac-----t----------gtg----t-gacc--ta-ggcaagcca-----gtt-----cagttc-c----ct----g--ta------------------------------------
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 5
s Rhinopithecus_bieti.k119_1041714                            1003 61 +      5697 GC--CAC------------------------CA-CC-AG----CT----------GTG----T-GGTC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--CGTTTGG-----ATTTCC-TC-----------CAAG-G
i Rhinopithecus_bieti.k119_1041714                       C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91241476 61 - 195417433 GC--CAC------------------------CA-CC-AG----CT----------GTG----T-GGTC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--CGTTTGG-----ATTTCC-TC-----------CAAG-G
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7677125 61 +   7961872 GC--CAC------------------------CA-CC-AG----CT----------GTG----T-GGTC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--CGTTTGG-----ATTTCC-TC-----------CAAG-G
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_301684                 114 65 +       280 gc--cac------------------------caact-aa-----t----------atg----t-gacc--tt-ggcaagcca-----ttt-----catttc-c----ct----g--tg-----ttctggtttcc-tc-----------CAAG-G
i Rousettus_aegyptiacus.RouAeg_scaffold_301684           C 0 C 0
s Saguinus_bicolor.k141_8081                                  2766 66 +     42994 GC--CAC------------------------CAACC-CG----CA----------GTG----A-GGCC--TT-GACACGATC-----CTT-----TGTCCC-T----CC----G--TGTTCTG-----ATTTCC-TC-----------CAAG-G
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                             1441 65 +      2253 GC--CAC------------------------CAACC-CG----CA----------GTG----A-GGCC--TT-GACACGA-C-----CTT-----TGTCCC-T----CC----G--TGTTCTG-----ATTTCC-TC-----------CAAG-G
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               1889 66 -      8737 GC--CAC------------------------CAACC-CG----CA----------GTG----A-GGCC--TT-GACACGATC-----CTT-----TGTCCC-T----CC----G--TGTTCTG-----ATTTCC-TC-----------CAAG-G
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                              1521 66 +      2343 GC--CAC------------------------CAACC-CG----CA----------GTG----A-GGCC--TT-GACACGACC-----CTT-----TGTCCC-T----CC----G--TGTTCTG-----ATTTCC-TC-----------CAAG-G
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209476423 66 + 209938924 GC--CAC------------------------CAACC-CG----CA----------GTG----A-GGCC--TT-GACACGATC-----CTT-----TGTCCC-T----CC----G--TGTTCTG-----ATTTCC-TC-----------CAAG-G
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                 848 66 -      7576 GC--CAC------------------------CAACC-CG----CA----------GTG----A-GGCC--TT-GACACGATC-----CTT-----TGTCCC-T----CC----G--TGTTCTG-----ATCTCC-TC-----------CAAG-G
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_133311                       2302 66 +      9503 ac--cac------------------------agact-ag----tt----------gtg----t-gacc--tt-ggcaagtcc-----ttt-----catttc-t----tc----g--tg-----ttttgatttcc-tc-----------CAAG-G
i Saiga_tatarica.SaiTat_scaffold_133311                  C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119952481 76 - 121099817 GC--CAC------------------------CAAAC-CT----TTCATGACAAAAAAA----A-GACC--TT-GACAAGATC-----CTT-----TATCCC-T----CT----G--AGTTTTG-----ATTTCC-TC-----------CAAG-G
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24823 76 +     46362 GC--CAC------------------------CAAAC-CT----CTCATGACAAAAAAA----A-GACC--TT-GACAAGATC-----CTT-----TATCCC-T----CT----G--AGTTTTG-----ATTTCC-TC-----------CAAG-G
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               24918 76 +     45824 GC--CAC------------------------CAAAC-CT----CTCATGACAAAAAAA----A-GACC--TT-GACAAGATC-----CTT-----TATCCC-T----CT----G--AGTTTTG-----ATTTCC-TC-----------CAAG-G
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             41597 75 -     64574 GC--CAC------------------------CAAAC-CT----CTCATGACAAA-AAA----A-GACC--TT-GACAAGATC-----CTT-----TATCCC-T----CT----G--AGTTTTG-----ATTTCC-TC-----------CAAG-G
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4670 76 -     23631 GC--CAC------------------------CAAAC-CT----TTCATGACAAAAAAA----A-GACC--TT-GACAAGATC-----CTT-----TATCCC-T----CT----G--AGTTTTG-----ATTTCC-TC-----------CAAG-G
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 24814 76 -     61129 GC--CAC------------------------CAAAC-CT----CTCATGACAAAAAAA----A-GACC--TT-GACAAGATC-----CTT-----TATCCC-T----CT----G--AGTTTTG-----ATTTCC-TC-----------CAAG-G
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5422156 66 -   5703754 GC--CAC------------------------CAACC-AG----CT----------GTG----A-GGCC--TT-GACAAGATC-----CTT-----TATCCC-T----CC----A--TGTTTTG-----ATTTCC-TC-----------CAAG-G
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          57397 66 -     80660 GC--CAC------------------------CAACC-AG----CT----------GTG----A-GGCC--TT-GACAAGATC-----CTT-----TATCCC-T----CC----A--TGTTTTG-----ATTTCC-TC-----------CAAG-G
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    156247 60 -    313613 -------------------------------------GG----AT----------GTA----T-TACC--TT-AGCAAGTCA-----TTT-----TCTTTT-C----CT----G--TG-----TTTTACTT-----TGA-G-AGtag-acag-t
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 5 I 109
s Semnopithecus_entellus.k141_1672505                         5269 61 -     12572 GC--CAC------------------------CA-CC-AG----CT----------GTG----T-GGTC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--CATTTTG-----ATTTCC-TC-----------CAAG-G
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      32122 61 +     39453 GC--CAC------------------------CA-CC-AG----CT----------GTG----T-GGTC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--CATTTTG-----ATTTCC-TC-----------CAAG-G
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           12626 61 +     27826 GC--CAC------------------------CA-CC-AG----CT----------GTG----T-GGTC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--CATTTTG-----ATTTCC-TC-----------CAAG-G
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            12172 61 -     19483 GC--CAC------------------------CA-CC-AG----CT----------GTG----T-GGTC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--CATTTTG-----ATTTCC-TC-----------CAAG-G
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      5468 61 -     12762 GC--CAC------------------------CA-CC-AG----CT----------GTG----T-GGTC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--CATTTTG-----ATTTCC-TC-----------CAAG-G
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           5311 61 +     13763 GC--CAC------------------------CA-CC-AG----CT----------GTG----T-GGTC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--CATTTTG-----ATTTCC-TC-----------CAAG-G
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     4344 12 -     30804 ---------------------------------------------------------------------------------------------------------------------------------tttcc-tc-----------tggg-g
i Sigmodon_hispidus.SigHis_scaffold_42075                I 76 C 0
s Spermophilus_dauricus.KZ294078.1                         1957209 66 -   3870691 gc--cat------------------------cagct-ag----ct----------agg----t-gacc--tc-accaagcca-----cct-----ctgttc-t----ct----g--ca-----cttcggtttcc-tc-----------CAAG-G
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             33161 22 +     97271 ---------------------------------------------------------g----t--gcc--cc-AGCAAGTTG-----CTT-----CAT--------------------------------------------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 10 I 40
s Suricata_suricatta.SurSur_flattened_line_6629              21720 40 -    196729 ac--cac------------------------cagctttg----ct----------gtg----t-gact--tc-gggaagtca-----ctt-----cac--------------------------------------------------------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 22
s Sus_scrofa.CM000828.4                                    6814820 66 +  69701581 ac--cac------------------------tgact-ac----tt----------gtg----t-gacc--tt-agcacgtcc-----ttt-----catttc-c----ct----a--tg-----ttttgatttcc-tG-----------CAAG-G
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                14410 61 +     41958 GC--CAA------------------------CAACG-AG-----C----------GTG----T-GACC--AT-GGCT----T-----GGT-----CATTTC-C----CT----G--TG-----TTTTGGTTTCC-TC-----------CAGG-G
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      122054 44 -    156842 gc--cac------------------------caact-ag----tt----------ttg----t-ggcc--tt-ggcaagtca-----ctt-----catgcc-t----c----------------------------------------------
i Tapirus_indicus.TapInd_scaffold_9301                   I 5 I 36
s Tapirus_terrestris.TapTer_scaffold_755                    390533 44 +    539355 ac--cac------------------------caact-ag----tt----------ttg----t-ggcc--tt-ggcaagtca-----ctt-----catgcc-t----c----------------------------------------------
i Tapirus_terrestris.TapTer_scaffold_755                 I 5 I 38
s Tarsius_lariang.k141_2201908                               29166 66 +     70052 gc--cac------------------------caaca-ag----tt----------gcg----t-gacc--ct-gacaagtcc-----ctt-----cactcc-t----tt----g--tcttttg-----atttcc-tc-----------aCAG-G
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                3962 66 -     16117 gc--cac------------------------caaca-ag----tt----------gcg----t-gacc--tt-gacaagtcc-----ctt-----cacttc-t----tt----g--tcttttg-----atttcc-tc-----------aCAG-G
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186433785 61 + 186847797 GC--CAc------------------------ca-cc-ag----ct----------gtg----t-ggcc--tt-gacaAGAGC-----C---------TTCA-T----CT----G--GGTTTTG-----ATTTCC-TC-----------CAAG-G
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              107895 68 +    114563 GT--CAT------------------------CACCT-GG----CC----------ATG----T-GACC-T-C-GAGATGTCA-----TTA-----CCTTTCCC----T-GTTCG--TT-----CTTTGATT--C-CC-----------CAGG-G
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_85600                    5566 57 +     18632 -------------------------------------caactagt----------ggg----t-gacc--tt-gccaagtca-----ctc-----catttc-t----ct----g--cg-----ttttcatctcc-tc----C------G-----
i Tolypeutes_matacus.TolMat_scaffold_85600               I 5 C 0
s Trachypithecus_auratus.k141_722599                         16208 61 -     20410 GC--CAC------------------------CA-CC-AG----CT----------GTG----T-GGTC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--CATTTTG-----ATTTCC-TC-----------CAAG-G
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      5328 61 -     12674 GC--CAC------------------------CA-CC-AG----CT----------GTG----T-GGTC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--CATTTTG-----ATTTCC-TC-----------CAAG-G
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       16316 61 +     19930 GC--CAC------------------------CA-CC-AG----CT----------GTG----T-GGTC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--CATTTTG-----ATTTCC-TC-----------CAAG-G
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      12716 61 -     19997 GC--CAC------------------------CA-CC-AG----CT----------GTG----T-GGTC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--CATTTTG-----ATTTCC-TC-----------CAAG-G
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            52859 61 -     60166 GC--CAC------------------------CA-CC-AG----CT----------GTG----T-GGTC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--CATTTTG-----ATTTCC-TC-----------CAAG-G
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        20322 61 -     27529 GC--CAC------------------------CA-CC-AG----CT----------GTG----T-GGTC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--CATTTTG-----ATTTCC-TC-----------CAAG-G
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                       1950 61 +      9229 GC--CAC------------------------CA-CC-AG----CT----------GTG----T-GGTC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--CATTTTG-----ATTTCC-TC-----------CAAG-G
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          13849 61 -     21137 GC--CAC------------------------CA-CC-AG----CT----------GTG----T-GGTC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--CATTTTG-----ATTTCC-TC-----------CAAG-G
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                    1954 61 +      9131 GC--CAC------------------------CA-CC-AG----CT----------GTG----T-GGTC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--CATTTTG-----ATTTCC-TC-----------CAAG-G
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                         1913 61 -      3730 GC--CAC------------------------CA-CC-AG----CT----------GTG----T-GGTC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--CATTTTG-----ATTTCC-TC-----------CAAG-G
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        30182 61 +     32220 GC--CAC------------------------CA-CC-AG----CT----------GTG----T-GGTC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--CATTTTG-----ATTTCC-TC-----------CAAG-G
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5944280 61 +   6242583 GC--CAC------------------------CA-CC-AG----CT----------GTG----T-GGTC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--CATTTTG-----ATTTCC-TC-----------CAAG-G
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       13537 61 +     20839 GC--CAC------------------------CA-CC-AG----CT----------GTG----T-GGTC--TT-GACAAGAGC-----C---------TTCA-T----CT----G--CATTTTG-----ATTTCC-TC-----------CAAG-G
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    3725 66 +     27266 ac--cac------------------------tgacc-ag----tt----------gtg----t-gatc--tt-ggcaagtcc-----ttt-----catttc-c----ta----g--tg-----ttttgatttcc-tc-----------CAAA-G
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tupaia_chinensis.KB320699.1                              2166326 59 +   4065304 GC--CAC------------------------CAAC--TG----TT----------GTA----T-GACT--T------AGGCA-----TTT-----TATATC-T----CT----G--TA-----TTTTGATTTCC-TA-----------CAA--G
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       2690 64 +     70247 gc--cac------------------------caac--tg----ct----------gta----t-gact--t------aggcaagtcactg-----tgtttc-t----ct----g--tg-----ttttgatttcc-tA-----------CAA--G
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15741426 66 +  33153633 ac--cac------------------------tgact-ag----tt----------gtg----t-gacc--tt-ggcaagtcc-----ttt-----catttc-c----ct----g--tg-----ttctgatttcc-tc-----------CAAG-G
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   56333 65 -     77625 -------------------------------------AG----TT----------GTA----T-CATC--TT-ATCAAGTCA-----TTT-----T-TGTC-C----CT----A--TG-----TTTCACTTTCA-TTGATGCAGTGA-AAAA-T
i Uropsilus_gracilis.UroGra_scaffold_12083               I 5 I 171
s Ursus_maritimus.KK499267.1                               4852792 39 -   5085361 gc--cac------------------------caagt-ag----tt----------gtg----t-gacc--tt-ggcaagtca-----ctt-----cat--------------------------------------------------------
i Ursus_maritimus.KK499267.1                             C 0 I 41
s Vulpes_lagopus.VulLag_flattened_line_30954                 14297 39 -     43706 gc--cac------------------------caact-ag----tt----------atg----t-gacc--tt-ggcaagtca-----ctt-----cat--------------------------------------------------------
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 41
s Xerus_inauris.XerIna_scaffold_2302                          4244 66 +    224448 gc--cac------------------------caact-ag----ct----------atg----t-gacc--tt-accatgcca-----cct-----ctgttc-t----ct----g--ca-----cattggtttcc-tc-----------CAAG-G
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      17593 50 +     63895 --------------------------------------------------------TG----T-CACC--CC-ACCAAACCA-----CTT-----CCTTCT-T----CC----A--TA------CTTGGTGTCC-AT-----------CAGA-A
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 12 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_1424488             62 66 -       542 ac--cac------------------------tgact-ag----tt----------gtg----t-gacc--tt-ggcaagtcc-----ttt-----catttc-c----ct----g--tg-----ttctgatttcc-tc-----------CAAG-G
i Ziphius_cavirostris.ZipCav_flattened_line_1424488      C 0 C 0
e Cheracebus_torquatus.k141_1170026                          64344 81 +     76511 I
e Cheracebus_regulus.k141_471822                            159875 81 -    216457 I
e Cheracebus_lugens.k141_1393925                              2308 81 +     17877 I
e Cheracebus_lucifer.k141_49986                               2432 81 -     17098 I
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vicugna_pacos.KN270157.1                                 5374276 47 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tonatia_saurophila.TonSau_scaffold_294                     83346 714 +    610378 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Sorex_araneus.JH798187.1                                13653314 9235 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                       107181400  0 - 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Ondatra_zibethicus.OndZib_scaffold_7387                      632 3336 +    140218 I
e Octodon_degus.JH651603.1                                  750513 17 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                18000 920 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184766 1004 -  29670104 I
e Manis_pentadactyla.KN006162.1                              54034 31 -    317179 I
e Manis_javanica.JSZB01003497.1                              21892 31 +    737560 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     5119  0 +     14121 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20664195 469 +  22651954 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    39057 4687 +     67921 I
e Desmodus_rotundus.KZ672289.1                             8632254 708 +  20541912 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Crocidura_indochinensis.CroInd_scaffold_37019               6144 44 -     19598 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1255607 4808 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Carollia_perspicillata.CarPer_scaffold_92756                7250 707 -     11696 I
e Camelus_ferus.KB017975.1                                  405530 47 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2337232 47 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10004760 47 -  17673402 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6909 705 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Anoura_caudifer.AnoCau_scaffold_1412                      187499 706 +    412891 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      11370 3 +     62944 TGG
s Acomys_cahirinus.AcoCah_scaffold_12655                     74603 3 +     87051 CAG
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 5 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     76171 3 -     89534 CAC
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   19967 3 -     52922 TGG
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         19898 3 -     28001 TGG
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                         10385 3 -     18505 TGG
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                          11250 3 -     12518 TGG
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             11589 3 +     51355 TGG
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                4700 3 -     36483 TGG
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              15152 3 +     28687 TGG
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 3625 3 +     27940 TGG
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            4713 3 -      9457 TGG
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             3671 3 +     30492 TGG
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              7892 3 +     47717 TGG
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              4393 3 +      5663 TGG
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             18844 3 +     50774 TGG
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          680792 3 -   2318259 cag
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 13
s Antilocapra_americana.AntAmePen_scaffold_43303              2062 3 -     32520 CGG
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 I 13
s Aotus_azarae.k141_3104676                                  17385 3 -     33861 TGG
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            17383 3 -     34016 TGG
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299810 3 -   5030052 TGG
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             17419 3 -     34685 TGG
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               30543 3 -     47192 TGG
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      15828 3 +     20879 CTA
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21212071 3 -  21539123 TGG
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               46870 3 -     48001 TGG
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 29671 3 -     30947 TGG
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               11446 3 -     89868 TGG
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              15828 3 -     40414 TGG
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                23716 3 +     72325 TGG
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15195125 3 +  23207421 cag
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 13
s Balaenoptera_bonaerensis.DF707048.1                         5590 3 -     18090 cag
i Balaenoptera_bonaerensis.DF707048.1                    C 0 I 13
s Beatragus_hunteri.BeaHun_scaffold_50177                    31872 3 +     34529 CAG
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 13
s Bison_bison.KN261452.1                                    204507 3 -    288883 CAG
i Bison_bison.KN261452.1                                 C 0 I 13
s Bos_indicus.CM003047.1                                  20277744 3 +  48749331 CAG
i Bos_indicus.CM003047.1                                 C 0 I 13
s Bos_mutus.JH880303.1                                     1130298 3 -   1948126 CAG
i Bos_mutus.JH880303.1                                   C 0 I 13
s Bos_taurus.CM000203.6                                   18088382 3 +  45695690 CAG
i Bos_taurus.CM000203.6                                  C 0 I 13
s Bubalus_bubalis.KI419123.1                               2824334 3 +   4408762 CAG
i Bubalus_bubalis.KI419123.1                             C 0 I 13
s Cacajao_ayresi.k141_552049                                104711 3 -    122966 tgg
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   64214 3 +     81800 tgg
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  33396 3 -     95584 tgg
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         57496 3 -    119600 tgg
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_10318                               1147 3 +     27907 TGC
i Callibella_humilis.k141_10318                          C 0 C 0
s Callimico_goeldii.k141_737284                                788 3 -     31217 TGG
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                             1083 3 +      5377 TGC
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592944 3 - 189096842 TGC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1758 3 -     12329 TGC
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Capra_aegagrus.CM003241.1                               18834822 3 +  46296322 cag
i Capra_aegagrus.CM003241.1                              C 0 I 13
s Capra_hircus.CM004588.1                                 18065623 3 -  44709034 cag
i Capra_hircus.CM004588.1                                C 0 I 13
s Capromys_pilorides.CapPil_scaffold_65020                    3518 3 -     12242 TGG
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 2
s Carlito_syrichta.NW_007259797.1                           158734 3 -    496798 TAA
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    140263 3 +    179628 CAG
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     97290 2 +    217609 CA-
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18352098 3 -  23392119 TGG
i Cavia_aperea.AVPZ01000300.1                            C 0 I 2
s Cavia_porcellus.DS562891.1                              18364358 3 -  23407841 TGG
i Cavia_porcellus.DS562891.1                             C 0 I 2
s Cavia_tschudii.CavTsc_scaffold_8919                       103240 3 +    143979 TGG
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 I 2
s Cebuella_pygmaea.k141_793006                                 784 3 -     15088 TGC
i Cebuella_pygmaea.k141_793006                           C 0 C 0
s Cebus_albifrons.Contig27                                25654264 3 +  26074798 tgg
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                2202 3 +     28840 TGG
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 1931 3 +     14051 TGG
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         8538 3 +     31688 CAA
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Cercocebus_atys.KQ010504.1                               4480915 3 +   4669795 TGG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        5416 3 +     17872 tgg
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           6004 3 -     14043 tgg
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          14103 3 +     27781 tgg
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        14263 3 -     20310 tgg
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          17236 3 +     29689 tgg
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           11995 3 -     20078 TGG
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          19909 3 -     27936 TGG
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            8782 3 -     17152 tgg
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38828509 3 +  39242232 tgg
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21228014 3 -  21565898 tgg
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       45126 3 -     53127 tgg
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        5387 3 +     13442 tgg
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       19929 3 -     27947 tgg
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         2957 3 +     10558 tgg
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          5960 3 +     14005 TGG
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            7521 2 -      8501 -AG
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 I 13
s Chiropotes_albinasus.k141_2206961                           2567 3 -     15524 TGG
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chiropotes_israelita.k141_747660                          101839 3 +    146308 tgg
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          33646 3 -     50570 tgg
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18433832 3 -  18827391 TGG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       20328 3 -     50209 TGG
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135427334 3 + 135778131 TGG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1915870 3 +   2368649 TGG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199954111 3 + 200372422 TGG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              42420 3 +     84244 TGG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17552385 3 -  53390261 aga
i Condylura_cristata.JH655891.1                          I 157 I 400
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           3987 3 +     23735 CAG
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 I 20
s Cricetomys_gambianus.CriGam_scaffold_18520                 53830 3 +     63868 CAG
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11669600 3 + 224834208 cag
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    839202 3 +   1526836 TGG
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 1 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  38441 3 +     51376 TGG
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 2
s Dasyprocta_punctata.DasPun_flattened_line_15900             3072 3 -     75252 TCA
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 2
s Dasypus_novemcinctus.JH564415.1                            70526 2 +   2246927 -ag
i Dasypus_novemcinctus.JH564415.1                        C 0 I 12
s Delphinapterus_leucas.KZ290073.1                        16815000 3 +  35494412 cag
i Delphinapterus_leucas.KZ290073.1                       C 0 I 13
s Dolichotis_patagonum.DolPat_scaffold_30833                 35791 3 -     42551 TGG
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 I 2
s Eidolon_helvum.KE797349.1                                    900 3 -     31197 cag
i Eidolon_helvum.KE797349.1                              C 0 I 10
s Elaphurus_davidianus.JRFZ01104969.1                       315268 3 +    607251 cag
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 13
s Ellobius_lutescens.LOEQ01008920.1                          24941 3 -    110024 CAG
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                            4870 3 +      8657 AAG
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2150933 3 -  14770903 CAa
i Eptesicus_fuscus.JH977646.1                            C 0 I 10
s Erythrocebus_patas.Contig38                             21210504 3 -  21539334 TGG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           14427 3 +    133382 cag
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 13
s Eubalaena_japonica.EubJap_flattened_line_31514             28376 3 -     44125 cag
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 I 13
s Fukomys_damarensis.KN121974.1                             852872 3 +   3816255 CAG
i Fukomys_damarensis.KN121974.1                          C 0 I 2
s Galeopterus_variegatus.GalVar_scaffold_108840               5899 3 -      9135 CTG
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     612516 3 -    660261 cag
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 I 13
s Glis_glis.GliGli_scaffold_19807                            35614 3 +     49224 CAG
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              20596 3 -     32273 TGG
i Gorilla_beringei.k141_3596273                          I 65 C 0
s Gorilla_gorilla.LT578341.1                             186342731 3 + 186649187 TGG
i Gorilla_gorilla.LT578341.1                             I 65 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   37239 3 +     78134 TAG
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 23111 3 +     36099 CAG
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 I 13
s Hippopotamus_amphibius.HipAmp_scaffold_9076               113859 2 +    128679 CT-
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 I 11
s Hipposideros_armiger.JXIK01000431.1                       113656 3 +   1711038 cag
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 10
s Hipposideros_galeritus.HipGal_scaffold_101188               2222 3 +      9903 CAG
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 I 10
s Hoolock_leuconedys.ctg274                                    440183 3 +    630532 TGA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            27185 3 -    143317 TGG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 2
s Hystrix_cristata.HysCri_scaffold_5660                      85351 3 +    135385 tag
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7525391 3 -   7955117 CTG
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                2207 3 -     31341 cag
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 I 13
s Jaculus_jaculus.JH725527.1                               8278920 3 -   9596543 AAT
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                 1946 3 -     18011 Tag
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 I 13
s Lagothrix_lagothricha.k141_1005387                         17889 3 -     38430 TGG
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    20373 3 -     42476 cag
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 10
s Leontocebus_fuscicollis.k141_1820339                        9522 3 +     64341 TGG
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           1864 3 -     35062 TGG
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        9551 3 +     35603 TGG
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    31167 3 +     38576 AGG
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         27871 3 +     66356 AGG
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             271478 3 -    662738 cag
i Lipotes_vexillifer.KE559953.1                          C 0 I 13
s Lophocebus_aterrimus.ctg367                              1442464 3 +   1826925 tgg
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                              12275 3 +     40492 tgg
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59681525 3 +  60120075 tgg
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 18071 3 -     26193 tgg
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            85846 3 -    114318 tgg
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 11537 3 -     23192 tgg
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                21002 3 -     29190 tgg
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  29581 3 +     37952 tgg
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186844654 3 + 187317192 TGG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25463235 3 -  25927173 TGG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  85439 3 +     89720 tgg
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                12451 3 +     20474 tgg
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  12225 3 -     14993 tgg
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  335088 3 -    668171 tgg
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                10515 3 -     24072 tgg
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               31146 3 -     45290 tgg
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                  5942 3 +    270270 cag
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 10
s Mandrillus_leucophaeus.scaffold280                      23942737 3 -  24302211 TGG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356845 3 +    752769 tgg
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33106474 3 -  40650429 CTG
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        16510 3 -    207569 cag
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 10
s Meriones_unguiculatus.MerUng_scaffold_7390                 37526 3 +    140813 CAG
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    6639 3 +     10310 cag
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 I 13
s Mico_argentatus.k141_1024458                                 783 3 -     20047 TGC
i Mico_argentatus.k141_1024458                           C 0 C 0
s Mico_humeralifer.k141_1346949                               1196 3 +      1399 TGC
i Mico_humeralifer.k141_1346949                          C 0 C 0
s Mico_schneideri.k141_916733                                        783 3 +      5107 TGC
i Mico_schneideri.k141_916733                                  C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1853690 3 +   8254450 CAG
i Miniopterus_natalensis.LDJU01000034.1                  I 16 I 11
s Miniopterus_schreibersii.MinSch_scaffold_18080             37368 3 +     64694 CAG
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 16 I 11
s Miopithecus_ogouensis.k141_534055                          14412 3 -     28506 TGG
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    30384 3 -    437263 cag
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 13
s Mormoops_blainvillei.MorMeg_scaffold_1417                 144403 3 -    366855 CAG
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 10
s Moschus_moschiferus.MosMos_scaffold_13123                   4698 3 +     82753 cag
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 13
s Murina_feae.MurFea_scaffold_85699                          10944 3 +     14753 CAG
i Murina_feae.MurFea_scaffold_85699                      C 0 I 8
s Mus_caroli.LT608237.1                                   84365118 3 - 120012414 CAG
i Mus_caroli.LT608237.1                                  I 16 C 0
s Mus_musculus.chr8                                       87654522 3 - 129401213 CAG
i Mus_musculus.chr8                                      I 16 C 0
s Mus_pahari.LT608297.1                                   31359224 3 -  89631738 CCG
i Mus_pahari.LT608297.1                                  I 16 C 0
s Mus_spretus.CM004101.1                                  90757309 3 - 130317789 CAG
i Mus_spretus.CM004101.1                                 I 16 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              8864 3 +     14296 CAA
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     73698 3 -     80779 TGG
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 I 2
s Myotis_brandtii.KE162005.1                                284414 3 -  10118263 CAG
i Myotis_brandtii.KE162005.1                             C 0 I 10
s Myotis_davidii.KB100139.1                                1591732 3 -   6019432 CAG
i Myotis_davidii.KB100139.1                              C 0 I 10
s Myotis_lucifugus.GL429869.1                              3907833 3 -   4330536 CAG
i Myotis_lucifugus.GL429869.1                            C 0 I 10
s Myotis_myotis.MyoMyo_scaffold_44643                         2389 3 +     25416 CAG
i Myotis_myotis.MyoMyo_scaffold_44643                    C 0 I 10
s Nasalis_larvatus.k141_413338                               20477 3 +     21681 TGG
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5869349 3 +   7148211 cag
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 13
s Noctilio_leporinus.NocLep_scaffold_251                    760628 3 +    783361 Cag
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 10
s Ochotona_princeps.JH802162.1                             1368107 3 +   3988456 CAG
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         148074 3 +    630418 cag
i Odocoileus_virginianus.KZ100018.1                      C 0 I 13
s Okapia_johnstoni.LVCL01S0005463.1                          82462 3 -    150152 cag
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 13
s Onychomys_torridus.OnyTor_scaffold_2986                    84398 3 +    102263 CAG
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2785240 3 -  10937097 cag
i Orcinus_orca.KB316932.1                                C 0 I 13
s Ovis_aries.CM001607.2                                   17590910 3 +  44047080 cag
i Ovis_aries.CM001607.2                                  C 0 I 13
s Ovis_canadensis.OviCan_scaffold_2572                      179061 3 -    191736 cag
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 I 13
s Pan_paniscus.KQ411613.1                                    48718 3 +     80009 TGG
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189147588 3 + 189151597 TGG
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1269791 3 -   2937107 cag
i Pantholops_hodgsonii.KE114653.1                        C 0 I 13
s Papio_anubis.CM001495.2                                183448653 3 + 183742232 TGG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            12184 3 +     20448 tgg
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20568995 3 +  20919399 tgg
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                  10941 3 +     41871 tgg
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    14219 3 +     27711 tgg
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  5218 3 -     11374 tgg
i Papio_ursinus.k141_5274964                             C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18215143 3 -  18517816 CAG
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_221660                     1135 3 -      2102 TAG
i Petromus_typicus.PetTyp_scaffold_221660                I 23 I 2
s Phocoena_phocoena.PhoPho_flattened_line_24159              12311 3 +     63832 cag
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 13
s Piliocolobus_badius.k141_1142974                            3581 3 +     68526 tgg
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        43718 3 +     89929 tgg
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            45134 3 +     51399 tgg
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14301370 3 -  14605196 TGG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             5713 3 +     22620 CGG
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 10
s Pithecia_albicans.k141_1476471                              7111 3 +     26961 tgg
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          3238 3 +     23417 tgg
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                7103 3 +     29694 TGG
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          32129 3 +     52772 tgg
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           7125 3 +     26198 tgg
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3943655 3 +   4542175 tgg
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            7089 3 -     23490 tgg
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610           1851 3 +      7680 cag
i Platanista_gangetica.PlaMin_flattened_line_173610      C 0 I 13
s Plecturocebus_bernhardi.k141_2549090                       11350 3 -     39866 TGG
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        20513 3 +     34906 TGG
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       24775 3 +     87950 tgg
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     25602 3 +     88961 tgg
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         11272 3 +     39403 TGG
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          25055 3 -     87928 tgg
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         32017 3 +     60166 TGG
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      32213 3 +     67232 tgg
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          27686 3 +     90634 tgg
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          25059 3 -     89403 tgg
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189136506 3 + 189387572 CGG
i Pongo_abelii.CM009266.2                                T 24608 C 0
s Pongo_pygmaeus.ctg66                                     9576116 3 +   9816681 CGG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               78658 3 -     81375 TGG
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                             10494 3 +     19060 tgg
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Pteronotus_parnellii.KE909381.1                            17951 3 -     21811 CAG
i Pteronotus_parnellii.KE909381.1                        C 0 I 9
s Pteropus_alecto.KB030862.1                              22987347 3 +  28871421 TGG
i Pteropus_alecto.KB030862.1                             C 0 I 10
s Pteropus_vampyrus.KN525825.1                             1370907 3 +   4952924 TGG
i Pteropus_vampyrus.KN525825.1                           C 0 I 10
s Pygathrix_cinerea.k141_1153803                             20471 3 -     91421 TGG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7614596 3 +   7812017 TGG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             20501 3 -     72585 TGG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  9912 3 +     55207 cag
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 13
s Rattus_norvegicus.chr16                                 53574551 3 +  90668790 CAG
i Rattus_norvegicus.chr16                                I 16 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        370106 3 -   3329780 cag
i Rhinolophus_sinicus.LVEH01000134.1                     I 5 I 10
s Rhinopithecus_bieti.k119_1041714                            1064 3 +      5697 TGG
i Rhinopithecus_bieti.k119_1041714                       C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91241537 3 - 195417433 TGG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7677186 3 +   7961872 TGG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_301684                 179 3 +       280 TGG
i Rousettus_aegyptiacus.RouAeg_scaffold_301684           C 0 I 10
s Saguinus_bicolor.k141_8081                                  2832 3 +     42994 TGG
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                             1506 3 +      2253 TGG
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               1955 3 -      8737 TGG
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                              1587 3 +      2343 TGG
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209476489 3 + 209938924 TGG
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                 914 3 -      7576 TGG
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_133311                       2368 3 +      9503 CAG
i Saiga_tatarica.SaiTat_scaffold_133311                  C 0 I 13
s Saimiri_boliviensis.NW_024100920.1                     119952557 3 - 121099817 TGG
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24899 3 +     46362 TGG
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               24994 3 +     45824 TGG
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             41672 3 -     64574 TGG
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4746 3 -     23631 TGG
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 24890 3 -     61129 TGG
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5422222 3 -   5703754 TGG
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          57463 3 -     80660 TGG
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Semnopithecus_entellus.k141_1672505                         5330 3 -     12572 TGG
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      32183 3 +     39453 TGG
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           12687 3 +     27826 TGG
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            12233 3 -     19483 TGG
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      5529 3 -     12762 TGG
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           5372 3 +     13763 TGG
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     4356 3 -     30804 cAG
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1957275 3 -   3870691 CTG
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Sus_scrofa.CM000828.4                                    6814886 2 +  69701581 CT-
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                14471 2 +     41958 C-G
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 10
s Tarsius_lariang.k141_2201908                               29232 3 +     70052 CGA
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                4028 3 -     16117 CAA
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186433846 3 + 186847797 TGG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              107963 3 +    114563 TGG
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 2
s Tolypeutes_matacus.TolMat_scaffold_85600                    5623 2 +     18632 -AG
i Tolypeutes_matacus.TolMat_scaffold_85600               C 0 I 13
s Trachypithecus_auratus.k141_722599                         16269 3 -     20410 TGG
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      5389 3 -     12674 TGG
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       16377 3 +     19930 TGG
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      12777 3 -     19997 TAG
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            52920 3 -     60166 TGG
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        20383 3 -     27529 TGG
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                       2011 3 +      9229 TAG
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          13910 3 -     21137 TGG
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                    2015 3 +      9131 TAG
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                         1974 3 -      3730 TGG
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        30243 3 +     32220 TGG
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5944341 3 +   6242583 TGG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       13598 3 +     20839 TGG
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    3791 3 +     27266 CAT
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 I 13
s Tupaia_chinensis.KB320699.1                              2166385 3 +   4065304 CAG
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       2754 3 +     70247 CAG
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15741492 3 +  33153633 cag
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 13
s Uropsilus_gracilis.UroGra_scaffold_12083                   56569 3 -     77625 gag
i Uropsilus_gracilis.UroGra_scaffold_12083               I 171 I 1040
s Xerus_inauris.XerIna_scaffold_2302                          4310 3 +    224448 CTG
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      17643 3 +     63895 CAC
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_1424488            128 3 -       542 cag
i Ziphius_cavirostris.ZipCav_flattened_line_1424488      C 0 I 13
e Cheracebus_torquatus.k141_1170026                          64344 81 +     76511 I
e Cheracebus_regulus.k141_471822                            159875 81 -    216457 I
e Cheracebus_lugens.k141_1393925                              2308 81 +     17877 I
e Cheracebus_lucifer.k141_49986                               2432 81 -     17098 I
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202 0 +      8798 C
e Galago_senegalensis.k141_631886                             7400 0 +     11339 C
e Galago_moholi.ctg2040                                     429710 0 -    453645 C
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445 0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734 0 -     33856 C
e Perodicticus_potto.k141_1186926                              597 0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219 0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 14336 41 -     43706 I
e Vicugna_pacos.KN270157.1                                 5374276 47 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4852831 41 -   5085361 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tonatia_saurophila.TonSau_scaffold_294                     83346 714 +    610378 I
e Tapirus_terrestris.TapTer_scaffold_755                    390577 38 +    539355 I
e Tapirus_indicus.TapInd_scaffold_9301                      122098 36 -    156842 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Suricata_suricatta.SurSur_flattened_line_6629              21760 22 -    196729 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             33183 40 +     97271 I
e Sorex_araneus.JH798187.1                                13653314 9235 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               4974 81 +   1910179 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    156307 109 -    313613 I
e Puma_concolor.QAVW01001104.1                            20277516 22 -  38429054 I
e Pteronura_brasiliensis.PteBra_flattened_line_76658           927 41 -      3818 I
e Psammomys_obesus.NESX01036370.1                            15160 2 -     21651 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15736 22 -     78924 I
e Panthera_tigris.KE722367.1                               4724446 22 -   8748460 I
e Panthera_pardus.KV860321.1                                267626 22 +  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                  154310 22 +    230217 I
e Otocyon_megalotis.JAEUCK010005147.1                       466222 41 -    559221 I
e Oryctolagus_cuniculus.CM000791.1                       107181400 0 - 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Ondatra_zibethicus.OndZib_scaffold_7387                      632 3336 +    140218 I
e Odobenus_rosmarus.KB229312.1                              508886 41 -   2017862 I
e Octodon_degus.JH651603.1                                  750513 17 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869 0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414 0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947 0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9152795 41 -   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                20309740 41 +  31847680 I
e Nannospalax_galili.KL204047.1                            2040081 0 -   3037898 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Mustela_putorius.JH418006.1                               304069 41 -  14710649 I
e Mungos_mungo.MunMun_flattened_line_40893                     493 22 +      5729 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_93702         8152 41 -      8324 I
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                18000 920 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184766 1004 -  29670104 I
e Mellivora_capensis.MelCap_flattened_line_69365             12758 41 +     13704 I
e Manis_pentadactyla.KN006162.1                              54034 31 -    317179 I
e Manis_javanica.JSZB01003497.1                              21892 31 +    737560 I
e Lycaon_pictus.CM007581.1                                17958878 41 -  59628241 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     5119 0 +     14121 I
e Leptonychotes_weddellii.KB714746.1                       3045284 41 +   3914936 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  48458 20 +     55795 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20664195 469 +  22651954 I
e Helogale_parvula.HelPar_flattened_line_2585               245492 16 +    327341 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689 0 +     41679 C
e Felis_nigripes.FelNig_flattened_line_20823                 12788 22 -     36744 I
e Felis_catus_fca126.CM031415.1                           20199128 22 + 205367284 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               36755 38 +    498745 I
e Equus_caballus.CM000403.2                               18534726 38 -  39960074 I
e Equus_asinus.JREZ01000139.1                              1286917 38 +   4378816 I
e Enhydra_lutris.KZ291758.1                               16338994 41 -  41312741 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    39057 4687 +     67921 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    9384 38 +    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  676624 38 +   1390856 I
e Desmodus_rotundus.KZ672289.1                             8632254 708 +  20541912 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129             31675 22 -     87169 I
e Crocidura_indochinensis.CroInd_scaffold_37019               6144 44 -     19598 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1255607 4808 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5805 38 -     25243 I
e Carollia_perspicillata.CarPer_scaffold_92756                7250 707 -     11696 I
e Canis_lupus_orion.HG994398.1                            18503935 41 +  63665305 I
e Canis_lupus_familiaris.chr16                            17962638 41 -  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                         9038162 41 -   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     3467 41 -     43241 I
e CanFam4.chr16                                           17802721 41 -  60362399 I
e Camelus_ferus.KB017975.1                                  405530 47 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2337232 47 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10004760 47 -  17673402 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6909 705 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         538 0 +      5281 C
e Anoura_caudifer.AnoCau_scaffold_1412                      187499 706 +    412891 I
e Ailurus_fulgens.LNAC01001112.1                             81966 41 -    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                    9513052 41 -  29979442 I
e Acinonyx_jubatus.LLWD01001279.1                           835125 22 -   1699592 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      11373 2 +     62944 T---G
s Acinonyx_jubatus.LLWD01001279.1                           835147 2 -   1699592 t---a
i Acinonyx_jubatus.LLWD01001279.1                        I 22 I 5
s Acomys_cahirinus.AcoCah_scaffold_12655                     74606 2 +     87051 C---A
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9513093 2 -  29979442 t---a
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 41 I 5
s Ailurus_fulgens.LNAC01001112.1                             82007 2 -    347723 T---A
i Ailurus_fulgens.LNAC01001112.1                         I 41 I 5
s Allactaga_bullata.AllBul_scaffold_9566                     76174 1 -     89534 T----
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   19970 2 -     52922 T---G
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         19901 2 -     28001 T---G
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                         10388 2 -     18505 T---G
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                          11253 2 -     12518 T---G
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             11592 2 +     51355 T---G
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                4703 2 -     36483 T---G
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              15155 2 +     28687 T---G
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 3628 2 +     27940 T---G
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            4716 2 -      9457 T---G
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             3674 2 +     30492 T---G
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              7895 2 +     47717 T---G
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              4396 2 +      5663 T---G
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             18847 2 +     50774 T---G
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          680808 2 -   2318259 t---a
i Ammotragus_lervia.NIVO01071767.1                       I 13 I 5
s Antilocapra_americana.AntAmePen_scaffold_43303              2078 2 -     32520 t---a
i Antilocapra_americana.AntAmePen_scaffold_43303         I 13 I 5
s Aotus_azarae.k141_3104676                                  17388 2 -     33861 T---G
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            17386 2 -     34016 T---G
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299813 2 -   5030052 T---G
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             17422 2 -     34685 T---G
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               30546 2 -     47192 T---G
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      15831 2 +     20879 T---A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21212074 2 -  21539123 T---G
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               46873 2 -     48001 T---G
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 29674 2 -     30947 T---G
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               11449 2 -     89868 T---G
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              15831 2 -     40414 T---G
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                23719 2 +     72325 T---G
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15195141 2 +  23207421 t---a
i Balaenoptera_acutorostrata.KI537508.1                  I 13 I 5
s Balaenoptera_bonaerensis.DF707048.1                         5606 2 -     18090 t---a
i Balaenoptera_bonaerensis.DF707048.1                    I 13 I 5
s Beatragus_hunteri.BeaHun_scaffold_50177                    31888 2 +     34529 t---a
i Beatragus_hunteri.BeaHun_scaffold_50177                I 13 I 5
s Bison_bison.KN261452.1                                    204523 2 -    288883 t---a
i Bison_bison.KN261452.1                                 I 13 I 5
s Bos_indicus.CM003047.1                                  20277760 2 +  48749331 t---a
i Bos_indicus.CM003047.1                                 I 13 I 5
s Bos_mutus.JH880303.1                                     1130314 2 -   1948126 t---a
i Bos_mutus.JH880303.1                                   I 13 I 5
s Bos_taurus.CM000203.6                                   18088398 2 +  45695690 t---a
i Bos_taurus.CM000203.6                                  I 13 I 5
s Bubalus_bubalis.KI419123.1                               2824350 2 +   4408762 t---a
i Bubalus_bubalis.KI419123.1                             I 13 I 5
s Cacajao_ayresi.k141_552049                                104714 2 -    122966 t---g
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   64217 2 +     81800 t---g
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  33399 2 -     95584 t---g
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         57499 2 -    119600 t---g
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_10318                               1150 2 +     27907 T---G
i Callibella_humilis.k141_10318                          C 0 C 0
s Callimico_goeldii.k141_737284                                791 2 -     31217 T---G
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                             1086 2 +      5377 T---G
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592947 2 - 189096842 T---G
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1761 2 -     12329 T---G
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s CanFam4.chr16                                           17802762 2 -  60362399 t---a
i CanFam4.chr16                                          I 41 I 5
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     3508 2 -     43241 t---a
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 41 I 5
s Canis_lupus_dingo.QKWQ01000480.1                         9038203 2 -   9314153 t---a
i Canis_lupus_dingo.QKWQ01000480.1                       I 41 I 5
s Canis_lupus_familiaris.chr16                            17962679 2 -  59632846 t---a
i Canis_lupus_familiaris.chr16                           I 41 I 5
s Canis_lupus_orion.HG994398.1                            18503976 2 +  63665305 t---a
i Canis_lupus_orion.HG994398.1                           I 41 I 5
s Capra_aegagrus.CM003241.1                               18834838 2 +  46296322 t---a
i Capra_aegagrus.CM003241.1                              I 13 I 5
s Capra_hircus.CM004588.1                                 18065639 2 -  44709034 t---a
i Capra_hircus.CM004588.1                                I 13 I 5
s Capromys_pilorides.CapPil_scaffold_65020                    3523 2 -     12242 G---A
i Capromys_pilorides.CapPil_scaffold_65020               I 2 C 0
s Carlito_syrichta.NW_007259797.1                           158737 2 -    496798 T---G
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    140266 2 +    179628 T---A
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18352103 2 -  23392119 G---A
i Cavia_aperea.AVPZ01000300.1                            I 2 C 0
s Cavia_porcellus.DS562891.1                              18364363 2 -  23407841 G---A
i Cavia_porcellus.DS562891.1                             I 2 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                       103245 2 +    143979 G---A
i Cavia_tschudii.CavTsc_scaffold_8919                    I 2 C 0
s Cebuella_pygmaea.k141_793006                                 787 2 -     15088 T---G
i Cebuella_pygmaea.k141_793006                           C 0 C 0
s Cebus_albifrons.Contig27                                25654267 2 +  26074798 t---g
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                2205 2 +     28840 T---G
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 1934 2 +     14051 T---G
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         8541 2 +     31688 T---G
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12234820 2 +  27778364 t---a
i Ceratotherium_simum.JH767749.1                         I 38 I 5
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5843 2 -     25243 t---a
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 38 I 5
s Cercocebus_atys.KQ010504.1                               4480918 2 +   4669795 T---G
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        5419 2 +     17872 t---g
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           6007 2 -     14043 t---g
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          14106 2 +     27781 t---g
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        14266 2 -     20310 t---g
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          17239 2 +     29689 t---g
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           11998 2 -     20078 T---G
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          19912 2 -     27936 T---G
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            8785 2 -     17152 t---g
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38828512 2 +  39242232 t---g
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21228017 2 -  21565898 t---g
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       45129 2 -     53127 t---g
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        5390 2 +     13442 t---g
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       19932 2 -     27947 t---g
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         2960 2 +     10558 t---g
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          5963 2 +     14005 T---G
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            7536 5 -      8501 tggtc
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       I 13 I 2
s Chiropotes_albinasus.k141_2206961                           2570 2 -     15524 T---G
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chiropotes_israelita.k141_747660                          101842 2 +    146308 t---g
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          33649 2 -     50570 t---g
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18433835 2 -  18827391 T---G
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       20331 2 -     50209 T---G
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135427337 2 + 135778131 T---G
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1915873 2 +   2368649 T---G
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199954114 2 + 200372422 C---G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              42423 2 +     84244 C---G
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17552788 2 -  53390261 c---a
i Condylura_cristata.JH655891.1                          I 400 I 2
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           4010 2 +     23735 t---t
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      I 20 I 2
s Cricetomys_gambianus.CriGam_scaffold_18520                 53833 2 +     63868 T---A
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11669603 2 + 224834208 t---a
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               6188 2 -     19598 T---A
i Crocidura_indochinensis.CroInd_scaffold_37019          I 44 I 2
s Cryptoprocta_ferox.CryFer_flattened_line_16129             31697 2 -     87169 t---a
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 22 I 5
s Ctenodactylus_gundi.CteGun_scaffold_65                    839205 2 +   1526836 G---A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  38446 2 +     51376 G---A
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 2 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900             3077 2 -     75252 G---A
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 2 C 0
s Dasypus_novemcinctus.JH564415.1                            70540 4 +   2246927 tg-tc
i Dasypus_novemcinctus.JH564415.1                        I 12 I 2
s Delphinapterus_leucas.KZ290073.1                        16815016 2 +  35494412 t---a
i Delphinapterus_leucas.KZ290073.1                       I 13 I 5
s Dicerorhinus_sumatrensis.PEKH010002091.1                  676662 2 +   1390856 t---a
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 38 I 5
s Diceros_bicornis.DicBicMic_scaffold_5955                    9422 2 +    198055 t---a
i Diceros_bicornis.DicBicMic_scaffold_5955               I 38 I 5
s Dolichotis_patagonum.DolPat_scaffold_30833                 35796 2 -     42551 G---A
i Dolichotis_patagonum.DolPat_scaffold_30833             I 2 C 0
s Eidolon_helvum.KE797349.1                                    913 2 -     31197 t---t
i Eidolon_helvum.KE797349.1                              I 10 I 2
s Elaphurus_davidianus.JRFZ01104969.1                       315284 2 +    607251 t---a
i Elaphurus_davidianus.JRFZ01104969.1                    I 13 I 5
s Ellobius_lutescens.LOEQ01008920.1                          24944 2 -    110024 T---C
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                            4873 2 +      8657 T---A
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16339035 2 -  41312741 t---a
i Enhydra_lutris.KZ291758.1                              I 41 I 5
s Eptesicus_fuscus.JH977646.1                              2150946 2 -  14770903 t---t
i Eptesicus_fuscus.JH977646.1                            I 10 I 2
s Equus_asinus.JREZ01000139.1                              1286955 2 +   4378816 t---a
i Equus_asinus.JREZ01000139.1                            I 38 I 5
s Equus_caballus.CM000403.2                               18534764 2 -  39960074 t---a
i Equus_caballus.CM000403.2                              I 38 I 5
s Equus_przewalskii.KK951119.1                               36793 2 +    498745 t---a
i Equus_przewalskii.KK951119.1                           I 38 I 5
s Erythrocebus_patas.Contig38                             21210507 2 -  21539334 T---G
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           14443 2 +    133382 t---a
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 13 I 5
s Eubalaena_japonica.EubJap_flattened_line_31514             28392 2 -     44125 t---a
i Eubalaena_japonica.EubJap_flattened_line_31514         I 13 I 5
s Felis_catus.CM001381.2                                  20240278 2 + 206538554 t---a
i Felis_catus.CM001381.2                                 I 22 I 5
s Felis_catus_fca126.CM031415.1                           20199150 2 + 205367284 t---a
i Felis_catus_fca126.CM031415.1                          I 22 I 5
s Felis_nigripes.FelNig_flattened_line_20823                 12810 2 -     36744 t---a
i Felis_nigripes.FelNig_flattened_line_20823             I 22 I 5
s Fukomys_damarensis.KN121974.1                             852877 2 +   3816255 G---A
i Fukomys_damarensis.KN121974.1                          I 2 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               5902 2 -      9135 T---A
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 I 2
s Giraffa_tippelskirchi.LVKQ01S007888.1                     612532 2 -    660261 t---a
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 13 I 5
s Glis_glis.GliGli_scaffold_19807                            35617 2 +     49224 T---A
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              20599 2 -     32273 T---G
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186342734 2 + 186649187 T---G
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   37242 2 +     78134 C---A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               245508 2 +    327341 t---a
i Helogale_parvula.HelPar_flattened_line_2585            I 16 I 5
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 23127 2 +     36099 t---a
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 13 I 5
s Hippopotamus_amphibius.HipAmp_scaffold_9076               113872 2 +    128679 A---A
i Hippopotamus_amphibius.HipAmp_scaffold_9076            I 11 I 5
s Hipposideros_armiger.JXIK01000431.1                       113669 2 +   1711038 a---t
i Hipposideros_armiger.JXIK01000431.1                    I 10 I 2
s Hipposideros_galeritus.HipGal_scaffold_101188               2235 2 +      9903 A---t
i Hipposideros_galeritus.HipGal_scaffold_101188          I 10 I 2
s Hoolock_leuconedys.ctg274                                    440186 2 +    630532 T---G
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  48478 2 +     55795 t---a
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 20 I 5
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            27190 2 -    143317 G---A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 2 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      85354 2 +    135385 g---a
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7525394 2 -   7955117 T---A
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                2223 2 -     31341 t---a
i Inia_geoffrensis.IniGeo_flattened_line_34779           I 13 I 5
s Jaculus_jaculus.JH725527.1                               8278923 1 -   9596543 T----
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                 1962 2 -     18011 t---a
i Kogia_breviceps.KogBre_flattened_line_81059            I 13 I 5
s Lagothrix_lagothricha.k141_1005387                         17892 2 -     38430 T---G
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    20386 2 -     42476 t---t
i Lasiurus_borealis.LasBor_scaffold_32767                I 10 I 2
s Leontocebus_fuscicollis.k141_1820339                        9525 2 +     64341 T---G
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           1867 2 -     35062 T---G
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        9554 2 +     35603 T---G
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    31170 2 +     38576 T---G
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         27874 2 +     66356 T---G
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3045325 2 +   3914936 T---A
i Leptonychotes_weddellii.KB714746.1                     I 41 I 13828
s Lipotes_vexillifer.KE559953.1                             271494 2 -    662738 t---a
i Lipotes_vexillifer.KE559953.1                          I 13 I 5
s Lophocebus_aterrimus.ctg367                              1442467 2 +   1826925 t---g
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17958919 2 -  59628241 t---a
i Lycaon_pictus.CM007581.1                               I 41 I 5
s Macaca_arctoides.k141_2326796                              12278 2 +     40492 t---g
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59681528 2 +  60120075 t---g
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 18074 2 -     26193 t---g
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            85849 2 -    114318 t---g
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 11540 2 -     23192 t---g
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                21005 2 -     29190 t---g
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  29584 2 +     37952 t---g
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186844657 2 + 187317192 T---G
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25463238 2 -  25927173 T---G
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  85442 2 +     89720 t---g
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                12454 2 +     20474 t---g
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  12228 2 -     14993 t---g
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  335091 2 -    668171 t---g
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                10518 2 -     24072 t---g
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               31149 2 -     45290 t---g
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                  5955 2 +    270270 t---t
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 10 I 2
s Mandrillus_leucophaeus.scaffold280                      23942740 2 -  24302211 T---G
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356848 2 +    752769 t---g
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33106477 2 -  40650429 T---A
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        16523 2 -    207569 t---a
i Megaderma_lyra.MegLyr_scaffold_4542                    I 10 I 2
s Mellivora_capensis.MelCap_flattened_line_69365             12799 2 +     13704 t---a
i Mellivora_capensis.MelCap_flattened_line_69365         I 41 I 5
s Meriones_unguiculatus.MerUng_scaffold_7390                 37529 2 +    140813 T---A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    6655 2 +     10310 t---a
i Mesoplodon_bidens.MesBid_scaffold_108144               I 13 I 5
s Mico_argentatus.k141_1024458                                 786 2 -     20047 T---G
i Mico_argentatus.k141_1024458                           C 0 C 0
s Mico_humeralifer.k141_1346949                               1199 2 +      1399 T---G
i Mico_humeralifer.k141_1346949                          C 0 C 0
s Mico_schneideri.k141_916733                                        786 2 +      5107 T---G
i Mico_schneideri.k141_916733                                  C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1853704 2 +   8254450 t---t
i Miniopterus_natalensis.LDJU01000034.1                  I 11 I 2
s Miniopterus_schreibersii.MinSch_scaffold_18080             37382 2 +     64694 t---t
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 11 I 2
s Miopithecus_ogouensis.k141_534055                          14415 2 -     28506 G---G
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_93702         8193 2 -      8324 T---A
i Mirounga_angustirostris.MirAng_flattened_line_93702    I 41 N 0
s Monodon_monoceros.MonMon_M_scaffold_103                    30400 2 -    437263 t---a
i Monodon_monoceros.MonMon_M_scaffold_103                I 13 I 5
s Mormoops_blainvillei.MorMeg_scaffold_1417                 144416 2 -    366855 C---T
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 10 I 2
s Moschus_moschiferus.MosMos_scaffold_13123                   4714 2 +     82753 t---a
i Moschus_moschiferus.MosMos_scaffold_13123              I 13 I 5
s Mungos_mungo.MunMun_flattened_line_40893                     515 2 +      5729 t---a
i Mungos_mungo.MunMun_flattened_line_40893               I 22 I 5
s Mus_caroli.LT608237.1                                   84365121 2 - 120012414 T---A
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87654525 2 - 129401213 T---A
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31359227 2 -  89631738 T---A
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90757312 2 - 130317789 T---A
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              8867 2 +     14296 G---A
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               304110 2 -  14710649 t---a
i Mustela_putorius.JH418006.1                            I 41 I 5
s Myocastor_coypus.MyoCoy_scaffold_10123                     73703 2 -     80779 G---A
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 2 C 0
s Myotis_brandtii.KE162005.1                                284427 2 -  10118263 t---t
i Myotis_brandtii.KE162005.1                             I 10 I 2
s Myotis_davidii.KB100139.1                                1591745 2 -   6019432 t---t
i Myotis_davidii.KB100139.1                              I 10 I 2
s Myotis_lucifugus.GL429869.1                              3907846 2 -   4330536 t---t
i Myotis_lucifugus.GL429869.1                            I 10 I 2
s Myotis_myotis.MyoMyo_scaffold_44643                         2402 2 +     25416 t---t
i Myotis_myotis.MyoMyo_scaffold_44643                    I 10 I 2
s Nasalis_larvatus.k141_413338                               20480 2 +     21681 T---G
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20309781 2 +  31847680 T---a
i Neomonachus_schauinslandi.NINY01007730.1               I 41 I 312
s Neophocaena_asiaeorientalis.KZ687982.1                   5869365 2 +   7148211 t---a
i Neophocaena_asiaeorientalis.KZ687982.1                 I 13 I 5
s Noctilio_leporinus.NocLep_scaffold_251                    760641 2 +    783361 t---t
i Noctilio_leporinus.NocLep_scaffold_251                 I 10 I 2
s Nyctereutes_procyonoides.CAJHUB010000658.1               9152836 2 -   9404916 t---a
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 41 I 5
s Ochotona_princeps.JH802162.1                             1368110 2 +   3988456 T---A
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              508927 2 -   2017862 T---A
i Odobenus_rosmarus.KB229312.1                           I 41 I 5
s Odocoileus_virginianus.KZ100018.1                         148090 2 +    630418 t---a
i Odocoileus_virginianus.KZ100018.1                      I 13 I 5
s Okapia_johnstoni.LVCL01S0005463.1                          82478 2 -    150152 t---a
i Okapia_johnstoni.LVCL01S0005463.1                      I 13 I 5
s Onychomys_torridus.OnyTor_scaffold_2986                    84401 2 +    102263 T---A
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2785256 2 -  10937097 t---a
i Orcinus_orca.KB316932.1                                I 13 I 5
s Otocyon_megalotis.JAEUCK010005147.1                       466263 2 -    559221 t---a
i Otocyon_megalotis.JAEUCK010005147.1                    I 41 I 5
s Ovis_aries.CM001607.2                                   17590926 2 +  44047080 t---a
i Ovis_aries.CM001607.2                                  I 13 I 5
s Ovis_canadensis.OviCan_scaffold_2572                      179077 2 -    191736 t---a
i Ovis_canadensis.OviCan_scaffold_2572                   I 13 I 5
s Pan_paniscus.KQ411613.1                                    48721 2 +     80009 T---G
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189147591 2 + 189151597 T---G
i Pan_troglodytes.CM009242.2                             C 0 I 121
s Panthera_onca.PanOnc_flattened_line_3271                  154332 2 +    230217 t---a
i Panthera_onca.PanOnc_flattened_line_3271               I 22 I 5
s Panthera_pardus.KV860321.1                                267648 2 +  18783137 t---a
i Panthera_pardus.KV860321.1                             I 22 I 5
s Panthera_tigris.KE722367.1                               4724468 2 -   8748460 t---a
i Panthera_tigris.KE722367.1                             I 22 I 5
s Pantholops_hodgsonii.KE114653.1                          1269807 2 -   2937107 t---a
i Pantholops_hodgsonii.KE114653.1                        I 13 I 5
s Papio_anubis.CM001495.2                                183448656 2 + 183742232 T---G
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            12187 2 +     20448 t---g
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20568998 2 +  20919399 t---g
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                  10944 2 +     41871 t---g
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    14222 2 +     27711 t---g
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  5221 2 -     11374 t---g
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15758 2 -     78924 T---T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 22 I 5
s Peromyscus_maniculatus.KI615324.1                       18215146 2 -  18517816 T---A
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_221660                     1140 2 -      2102 G---A
i Petromus_typicus.PetTyp_scaffold_221660                I 2 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              12327 2 +     63832 t---a
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 13 I 5
s Piliocolobus_badius.k141_1142974                            3584 2 +     68526 t---a
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        43721 2 +     89929 t---a
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            45137 2 +     51399 t---a
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14301373 2 -  14605196 T---A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             5726 2 +     22620 t---c
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 10 I 2
s Pithecia_albicans.k141_1476471                              7114 2 +     26961 t---g
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          3241 2 +     23417 t---g
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                7106 2 +     29694 T---G
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          32132 2 +     52772 t---g
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           7128 2 +     26198 t---g
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3943658 2 +   4542175 t---g
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            7092 2 -     23490 t---g
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610           1867 2 +      7680 t---a
i Platanista_gangetica.PlaMin_flattened_line_173610      I 13 I 5
s Plecturocebus_bernhardi.k141_2549090                       11353 2 -     39866 T---G
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        20516 2 +     34906 T---G
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       24778 2 +     87950 t---g
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     25605 2 +     88961 t---g
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         11275 2 +     39403 T---G
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          25058 2 -     87928 t---g
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         32020 2 +     60166 T---G
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      32216 2 +     67232 t---g
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          27689 2 +     90634 t---g
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          25062 2 -     89403 t---g
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189136509 2 + 189387572 T---G
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9576119 2 +   9816681 T---G
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               78661 2 -     81375 T---G
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                             10497 2 +     19060 t---g
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Pteronotus_parnellii.KE909381.1                            17963 2 -     21811 t---t
i Pteronotus_parnellii.KE909381.1                        I 9 I 2
s Pteronura_brasiliensis.PteBra_flattened_line_76658           968 2 -      3818 t---a
i Pteronura_brasiliensis.PteBra_flattened_line_76658     I 41 I 5
s Pteropus_alecto.KB030862.1                              22987360 2 +  28871421 t---t
i Pteropus_alecto.KB030862.1                             I 10 I 2
s Pteropus_vampyrus.KN525825.1                             1370920 2 +   4952924 t---t
i Pteropus_vampyrus.KN525825.1                           I 10 I 2
s Puma_concolor.QAVW01001104.1                            20277538 2 -  38429054 t---a
i Puma_concolor.QAVW01001104.1                           I 22 I 5
s Pygathrix_cinerea.k141_1153803                             20474 2 -     91421 T---G
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7614599 2 +   7812017 T---G
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             20504 2 -     72585 T---G
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  9928 2 +     55207 t---a
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 13 I 5
s Rattus_norvegicus.chr16                                 53574554 2 +  90668790 T---A
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        370119 2 -   3329780 a---t
i Rhinolophus_sinicus.LVEH01000134.1                     I 10 I 2
s Rhinopithecus_bieti.k119_1041714                            1067 2 +      5697 T---G
i Rhinopithecus_bieti.k119_1041714                       C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91241540 2 - 195417433 T---G
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7677189 2 +   7961872 T---G
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_301684                 192 2 +       280 T---T
i Rousettus_aegyptiacus.RouAeg_scaffold_301684           I 10 I 2
s Saguinus_bicolor.k141_8081                                  2835 2 +     42994 T---A
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                             1509 2 +      2253 T---G
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               1958 2 -      8737 T---G
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                              1590 2 +      2343 T---G
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209476492 2 + 209938924 T---G
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                 917 2 -      7576 T---G
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_133311                       2384 2 +      9503 t---a
i Saiga_tatarica.SaiTat_scaffold_133311                  I 13 I 5
s Saimiri_boliviensis.NW_024100920.1                     119952560 2 - 121099817 T---G
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24902 2 +     46362 T---G
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               24997 2 +     45824 T---G
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             41675 2 -     64574 T---G
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4749 2 -     23631 T---G
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 24893 2 -     61129 T---G
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5422225 2 -   5703754 T---G
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          57466 2 -     80660 T---G
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Semnopithecus_entellus.k141_1672505                         5333 2 -     12572 T---G
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      32186 2 +     39453 T---G
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           12690 2 +     27826 T---G
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            12236 2 -     19483 T---G
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      5532 2 -     12762 T---G
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           5375 2 +     13763 T---G
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     4359 2 -     30804 C---G
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               5055 2 +   1910179 t---a
i Solenodon_paradoxus.SolPar_flattened_line_126          I 81 I 2
s Spermophilus_dauricus.KZ294078.1                         1957278 2 -   3870691 T---A
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             33223 2 +     97271 t---a
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 40 I 5
s Suricata_suricatta.SurSur_flattened_line_6629              21782 2 -    196729 t---a
i Suricata_suricatta.SurSur_flattened_line_6629          I 22 I 5
s Tadarida_brasiliensis.TadBra_scaffold_25820                14483 2 +     41958 t---c
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 10 I 2
s Tapirus_indicus.TapInd_scaffold_9301                      122134 2 -    156842 t---a
i Tapirus_indicus.TapInd_scaffold_9301                   I 36 I 5
s Tapirus_terrestris.TapTer_scaffold_755                    390615 2 +    539355 t---a
i Tapirus_terrestris.TapTer_scaffold_755                 I 38 I 5
s Tarsius_lariang.k141_2201908                               29235 2 +     70052 T---G
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                4031 2 -     16117 T---G
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186433849 2 + 186847797 T---G
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              107968 2 +    114563 G---A
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 2 C 0
s Tolypeutes_matacus.TolMat_scaffold_85600                    5638 5 +     18632 tagtc
i Tolypeutes_matacus.TolMat_scaffold_85600               I 13 I 2
s Trachypithecus_auratus.k141_722599                         16272 2 -     20410 T---G
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      5392 2 -     12674 T---G
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       16380 2 +     19930 T---G
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      12780 2 -     19997 T---G
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            52923 2 -     60166 T---G
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        20386 2 -     27529 T---G
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                       2014 2 +      9229 T---G
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          13913 2 -     21137 T---G
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                    2018 2 +      9131 T---G
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                         1977 2 -      3730 T---G
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        30246 2 +     32220 T---G
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5944344 2 +   6242583 T---G
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       13601 2 +     20839 T---G
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    3807 2 +     27266 t---a
i Tragulus_javanicus.TraJav_scaffold_40725               I 13 I 5
s Tupaia_chinensis.KB320699.1                              2166388 2 +   4065304 T---A
i Tupaia_chinensis.KB320699.1                            C 0 I 2
s Tupaia_tana.TupTan_flattened_line_394                       2757 2 +     70247 T---A
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 2
s Tursiops_truncatus.MRVK01000835.1                       15741508 2 +  33153633 t---a
i Tursiops_truncatus.MRVK01000835.1                      I 13 I 5
s Uropsilus_gracilis.UroGra_scaffold_12083                   57612 2 -     77625 a---a
i Uropsilus_gracilis.UroGra_scaffold_12083               I 1040 I 2
s Ursus_maritimus.KK499267.1                               4852872 2 -   5085361 t---a
i Ursus_maritimus.KK499267.1                             I 41 I 5
s Vulpes_lagopus.VulLag_flattened_line_30954                 14377 2 -     43706 t---a
i Vulpes_lagopus.VulLag_flattened_line_30954             I 41 I 5
s Xerus_inauris.XerIna_scaffold_2302                          4313 2 +    224448 T---A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      17646 1 +     63895 T----
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_1424488            144 2 -       542 t---a
i Ziphius_cavirostris.ZipCav_flattened_line_1424488      I 13 I 5
e Cheracebus_torquatus.k141_1170026                          64344 81 +     76511 I
e Cheracebus_regulus.k141_471822                            159875 81 -    216457 I
e Cheracebus_lugens.k141_1393925                              2308 81 +     17877 I
e Cheracebus_lucifer.k141_49986                               2432 81 -     17098 I
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441 0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202 0 +      8798 C
e Galago_senegalensis.k141_631886                             7400 0 +     11339 C
e Galago_moholi.ctg2040                                     429710 0 -    453645 C
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445 0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734 0 -     33856 C
e Perodicticus_potto.k141_1186926                              597 0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219 0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vicugna_pacos.KN270157.1                                 5374276 47 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tonatia_saurophila.TonSau_scaffold_294                     83346 714 +    610378 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6814888 0 +  69701581 C
e Sorex_araneus.JH798187.1                                13653314 9235 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    156307 109 -    313613 I
e Psammomys_obesus.NESX01036370.1                            15160 2 -     21651 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                       107181400 0 - 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Ondatra_zibethicus.OndZib_scaffold_7387                      632 3336 +    140218 I
e Octodon_degus.JH651603.1                                  750513 17 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869 0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414 0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947 0 - 196305487 C
e Nannospalax_galili.KL204047.1                            2040081 0 -   3037898 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Murina_feae.MurFea_scaffold_85699                          10947 8 +     14753 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                18000 920 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184766 1004 -  29670104 I
e Manis_pentadactyla.KN006162.1                              54034 31 -    317179 I
e Manis_javanica.JSZB01003497.1                              21892 31 +    737560 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     5119 0 +     14121 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20664195 469 +  22651954 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689 0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    39057 4687 +     67921 I
e Desmodus_rotundus.KZ672289.1                             8632254 708 +  20541912 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1255607 4808 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Catagonus_wagneri.CatWag_scaffold_2839                     97292 0 +    217609 C
e Carollia_perspicillata.CarPer_scaffold_92756                7250 707 -     11696 I
e Camelus_ferus.KB017975.1                                  405530 47 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2337232 47 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10004760 47 -  17673402 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6909 705 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         538 0 +      5281 C
e Anoura_caudifer.AnoCau_scaffold_1412                      187499 706 +    412891 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      11375 14 +     62944 G--AGACCT---------CAGT-CCT
s Acinonyx_jubatus.LLWD01001279.1                           835154 11 -   1699592 g---aacg-----------tga-ctg
i Acinonyx_jubatus.LLWD01001279.1                        I 5 I 11
s Acomys_cahirinus.AcoCah_scaffold_12655                     74608 13 +     87051 G---A----CT--GG-GC--TG-TCT
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9513100 11 -  29979442 g---aaag-----------tga-ccg
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 5 I 12
s Ailurus_fulgens.LNAC01001112.1                             82014  8 -    347723 G---G--------------Tga-ctg
i Ailurus_fulgens.LNAC01001112.1                         I 5 I 6
s Allactaga_bullata.AllBul_scaffold_9566                     76175  4 -     89534 ---------------------G-CCC
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 7
s Allenopithecus_nigroviridis.k141_3361533                   19972 14 -     52922 G--AGACCT---------CAGT-CCT
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         19903 14 -     28001 G--AGACCT---------CAGT-CCT
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                         10390 14 -     18505 G--AGACCT---------CAGT-CCT
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                          11255 14 -     12518 G--AGACCT---------CAGT-CCT
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             11594 14 +     51355 G--AGATCT---------CACT-Cct
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                4705 14 -     36483 G--AGATCT---------CACT-Cct
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              15157 14 +     28687 G--AGATCT---------CACT-Cct
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 3630 14 +     27940 G--AGATCT---------CACT-Cct
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            4718 14 -      9457 G--AGATCT---------CACT-Cct
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             3676 14 +     30492 G--AGATCT---------CACT-Cct
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              7897 14 +     47717 G--AGATCT---------CACT-Cct
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              4398 14 +      5663 G--AGATCT---------CACT-Cct
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             18849 14 +     50774 G--AGATCT---------CACT-Cct
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          680815 11 -   2318259 g---aacg-----------tga-cct
i Ammotragus_lervia.NIVO01071767.1                       I 5 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303              2085 11 -     32520 g---aacg-----------tga-cct
i Antilocapra_americana.AntAmePen_scaffold_43303         I 5 C 0
s Aotus_azarae.k141_3104676                                  17390 14 -     33861 G--AGGTCT---------CACT-Cct
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            17388 14 -     34016 G--AGGTCT---------CACT-CCT
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299815 14 -   5030052 G--AGGTCT---------CACT-CCT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             17424 14 -     34685 G--AGGTCT---------CACT-CTT
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               30548 14 -     47192 G--AGGTCT---------CACT-Cct
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      15833 13 +     20879 G---A----CT--GC-AT--TA-CCT
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21212076 14 -  21539123 G--AGATCT---------CACT-Cct
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               46875 14 -     48001 G--AGATCT---------CACT-Cct
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 29676 14 -     30947 G--ACATCT---------CACT-Cct
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               11451 14 -     89868 G--AGATCT---------CACT-Cct
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              15833 14 -     40414 G--ACATCT---------CACT-Cct
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                23721 14 +     72325 G--AGATCT---------CACT-Cct
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15195148 12 +  23207421 g---aacg-----------tgaacct
i Balaenoptera_acutorostrata.KI537508.1                  I 5 C 0
s Balaenoptera_bonaerensis.DF707048.1                         5613 12 -     18090 g---aacg-----------tgaacct
i Balaenoptera_bonaerensis.DF707048.1                    I 5 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    31895 11 +     34529 g---aacg-----------tga-cct
i Beatragus_hunteri.BeaHun_scaffold_50177                I 5 C 0
s Bison_bison.KN261452.1                                    204530 11 -    288883 g---aatg-----------tga-cct
i Bison_bison.KN261452.1                                 I 5 C 0
s Bos_indicus.CM003047.1                                  20277767 11 +  48749331 g---aatg-----------tga-cct
i Bos_indicus.CM003047.1                                 I 5 C 0
s Bos_mutus.JH880303.1                                     1130321 11 -   1948126 g---aatg-----------tga-cct
i Bos_mutus.JH880303.1                                   I 5 C 0
s Bos_taurus.CM000203.6                                   18088405 11 +  45695690 g---aatg-----------tga-cct
i Bos_taurus.CM000203.6                                  I 5 C 0
s Bubalus_bubalis.KI419123.1                               2824357 11 +   4408762 g---aatg-----------tga-cct
i Bubalus_bubalis.KI419123.1                             I 5 C 0
s Cacajao_ayresi.k141_552049                                104716 14 -    122966 g--agatct---------cacg-cct
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   64219 14 +     81800 g--agatct---------cacg-cct
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  33401 14 -     95584 g--agatct---------cacg-cct
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         57501 14 -    119600 g--agatct---------cacg-cct
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_10318                               1152 14 +     27907 G--AGATCT---------CACT-CCT
i Callibella_humilis.k141_10318                          C 0 C 0
s Callimico_goeldii.k141_737284                                793 14 -     31217 G--AGATCT---------CACT-CCT
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                             1088 14 +      5377 G--AGATCT---------CACT-CCT
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592949 14 - 189096842 G--AGATCT---------CACT-CCT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1763 14 -     12329 G--AGATCT---------CACT-CCT
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s CanFam4.chr16                                           17802769 11 -  60362399 g---aaca-----------caa-ctg
i CanFam4.chr16                                          I 5 I 12
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     3515 11 -     43241 g---aaca-----------caa-ctg
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 5 I 12
s Canis_lupus_dingo.QKWQ01000480.1                         9038210 11 -   9314153 g---aaca-----------caa-ctg
i Canis_lupus_dingo.QKWQ01000480.1                       I 5 I 12
s Canis_lupus_familiaris.chr16                            17962686 11 -  59632846 g---aaca-----------caa-ctg
i Canis_lupus_familiaris.chr16                           I 5 I 12
s Canis_lupus_orion.HG994398.1                            18503983 11 +  63665305 g---aaca-----------caa-ctg
i Canis_lupus_orion.HG994398.1                           I 5 I 12
s Capra_aegagrus.CM003241.1                               18834845  6 +  46296322 g---aacg-----------t------
i Capra_aegagrus.CM003241.1                              I 5 C 0
s Capra_hircus.CM004588.1                                 18065646  6 -  44709034 g---aacg-----------t------
i Capra_hircus.CM004588.1                                I 5 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    3525  7 -     12242 T---A---------------TC-TCA
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           158739 14 -    496798 G--CGATGG---------TCCT-CTG
i Carlito_syrichta.NW_007259797.1                        C 0 I 12
s Castor_canadensis.CasCan_scaffold_2074                    140268 13 +    179628 G---A-----T--CACAC--GT-CCT
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     97292  7 +    217609 -------G-----------TGA-Cct
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18352105  7 -  23392119 G---A---------------TC-TCA
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18364365  7 -  23407841 G---A---------------TC-TCA
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                       103247  7 +    143979 G---A---------------TC-TCA
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cebuella_pygmaea.k141_793006                                 789 14 -     15088 G--AGATCT---------CACT-CCT
i Cebuella_pygmaea.k141_793006                           C 0 C 0
s Cebus_albifrons.Contig27                                25654269 14 +  26074798 g--ggagct---------cact-cct
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                2207 14 +     28840 G--GGAGCT---------CACT-CCT
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 1936 14 +     14051 G--GGAGCT---------CACT-CCT
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         8543 14 +     31688 G--TGATGG---------TCCT-CTG
i Cephalopachus_bancanus.k141_1423433                    C 0 I 12
s Ceratotherium_simum.JH767749.1                          12234827 11 +  27778364 g---aatg-----------tga-cct
i Ceratotherium_simum.JH767749.1                         I 5 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5850 11 -     25243 g---aatg-----------tga-cct
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 5 C 0
s Cercocebus_atys.KQ010504.1                               4480920 14 +   4669795 G--AGACCT---------CAGG-CCT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        5421 14 +     17872 g--agacct---------cagg-cct
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           6009 14 -     14043 g--agacct---------cagg-cct
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          14108 14 +     27781 g--agacct---------cagg-cct
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        14268 14 -     20310 g--agacct---------cagt-cct
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          17241 14 +     29689 g--agacct---------cagt-cct
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           12000 14 -     20078 C--AGACCT---------CAGT-CCT
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          19914 14 -     27936 G--AGACTT---------CAGT-CCT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            8787 14 -     17152 g--agacct---------cagt-cct
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38828514 14 +  39242232 g--agacct---------cagt-cct
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21228019 14 -  21565898 g--agacct---------cagt-cct
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       45131 14 -     53127 g--agacct---------cagt-cct
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        5392 14 +     13442 g--agacct---------cagt-cct
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       19934 14 -     27947 g--agacct---------cagt-cct
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         2962 14 +     10558 g--agacct---------cagt-cct
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          5965 14 +     14005 C--AGACCT---------CAGT-CCT
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            7543 11 -      8501 g---agag-----------gga-cct
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       I 2 C 0
s Chiropotes_albinasus.k141_2206961                           2572 14 -     15524 G--AGATCT---------CACT-CCT
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chiropotes_israelita.k141_747660                          101844 14 +    146308 g--agatct---------cacg-cct
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          33651 14 -     50570 g--agatct---------cacg-cct
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18433837 14 -  18827391 G--AGACCT---------CAGT-CCT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       20333 14 -     50209 G--AGACCT---------CAGT-CCT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135427339 14 + 135778131 G--AGACCT---------CAGT-CCT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1915875 14 +   2368649 G--AGACCT---------CAGT-CCT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199954116 14 + 200372422 G--AGACCT---------CAGT-CCT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              42425 14 +     84244 G--AGACCT---------CAGT-CCT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17552792 11 -  53390261 g---aaca-----------gga-cct
i Condylura_cristata.JH655891.1                          I 2 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           4014 11 +     23735 g---aatg-----------tga-cct
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      I 2 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 53835 13 +     63868 G---A----CT--GT-CC--TG-TTC
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 230
s Cricetulus_griseus.LT883664.1                           11669605  2 + 224834208 g---a---------------------
i Cricetulus_griseus.LT883664.1                          C 0 I 1
s Crocidura_indochinensis.CroInd_scaffold_37019               6192 11 -     19598 A---CATG-----------GGC-CTT
i Crocidura_indochinensis.CroInd_scaffold_37019          I 2 I 13
s Cryptoprocta_ferox.CryFer_flattened_line_16129             31704 11 -     87169 g---aaca-----------tga-ctg
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 5 I 12
s Ctenodactylus_gundi.CteGun_scaffold_65                    839207  6 +   1526836 A---A---------------TC-TT-
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  38448  7 +     51376 A---A---------------TG-TCA
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 8
s Dasyprocta_punctata.DasPun_flattened_line_15900             3079  7 -     75252 G---A---------------TC-TCA
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 6
s Dasypus_novemcinctus.JH564415.1                            70546 11 +   2246927 g---agag-----------gaa-cct
i Dasypus_novemcinctus.JH564415.1                        I 2 C 0
s Delphinapterus_leucas.KZ290073.1                        16815023 12 +  35494412 g---aacg-----------tgaacct
i Delphinapterus_leucas.KZ290073.1                       I 5 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  676669 11 +   1390856 g---aatg-----------tga-cct
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 5 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    9429 11 +    198055 g---aatg-----------tga-cct
i Diceros_bicornis.DicBicMic_scaffold_5955               I 5 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 35798  7 -     42551 G---A---------------TC-TCA
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE797349.1                                    917 11 -     31197 g---gatg-----------tga-ctt
i Eidolon_helvum.KE797349.1                              I 2 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       315291 11 +    607251 g---aacg-----------tga-cct
i Elaphurus_davidianus.JRFZ01104969.1                    I 5 C 0
s Ellobius_lutescens.LOEQ01008920.1                          24946  2 -    110024 G---A---------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 19
s Ellobius_talpinus.LOJH01081419.1                            4875  2 +      8657 G---A---------------------
i Ellobius_talpinus.LOJH01081419.1                       C 0 I 19
s Enhydra_lutris.KZ291758.1                               16339042 11 -  41312741 g---aaca-----------tga-ccc
i Enhydra_lutris.KZ291758.1                              I 5 I 6
s Eptesicus_fuscus.JH977646.1                              2150950 11 -  14770903 g---agag-----------aga-cct
i Eptesicus_fuscus.JH977646.1                            I 2 C 0
s Equus_asinus.JREZ01000139.1                              1286962 11 +   4378816 g---aatg-----------tga-cct
i Equus_asinus.JREZ01000139.1                            I 5 C 0
s Equus_caballus.CM000403.2                               18534771 11 -  39960074 g---aatg-----------tga-cct
i Equus_caballus.CM000403.2                              I 5 C 0
s Equus_przewalskii.KK951119.1                               36800 11 +    498745 g---aatg-----------tga-cct
i Equus_przewalskii.KK951119.1                           I 5 C 0
s Erythrocebus_patas.Contig38                             21210509 14 -  21539334 G--AGATCT---------CAGT-CCT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           14450 12 +    133382 g---aatg-----------tgaacct
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 5 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             28399 12 -     44125 g---aacg-----------tgaacct
i Eubalaena_japonica.EubJap_flattened_line_31514         I 5 C 0
s Felis_catus.CM001381.2                                  20240285 11 + 206538554 g---aacg-----------tga-ctg
i Felis_catus.CM001381.2                                 I 5 I 12
s Felis_catus_fca126.CM031415.1                           20199157 11 + 205367284 g---aacg-----------tga-ctg
i Felis_catus_fca126.CM031415.1                          I 5 I 12
s Felis_nigripes.FelNig_flattened_line_20823                 12817 11 -     36744 g---aacg-----------tga-ctg
i Felis_nigripes.FelNig_flattened_line_20823             I 5 I 12
s Fukomys_damarensis.KN121974.1                             852879  7 +   3816255 G---A---------------TC-TCA
i Fukomys_damarensis.KN121974.1                          C 0 I 18
s Galeopterus_variegatus.GalVar_scaffold_108840               5906 13 -      9135 G---ATTGC---------ACTA-CTG
i Galeopterus_variegatus.GalVar_scaffold_108840          I 2 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     612539 11 -    660261 g---aacg-----------tga-tct
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 5 C 0
s Glis_glis.GliGli_scaffold_19807                            35619 16 +     49224 GAA-A----CT-TGA-AC--TA-Cct
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              20601 14 -     32273 G--AGACCT---------CAGT-CCT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186342736 14 + 186649187 G--AGACCT---------CAGT-CCT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   37244 15 +     78134 GAC-A----CT--GA-AC--TA-CCA
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               245515 11 +    327341 g---aaca-----------tga-ctg
i Helogale_parvula.HelPar_flattened_line_2585            I 5 I 12
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 23134 11 +     36099 g---aacg-----------tga-cct
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 5 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               113879 11 +    128679 g---aacg-----------tga-cct
i Hippopotamus_amphibius.HipAmp_scaffold_9076            I 5 C 0
s Hipposideros_armiger.JXIK01000431.1                       113673 11 +   1711038 g---acag-----------tga-ccc
i Hipposideros_armiger.JXIK01000431.1                    I 2 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188               2239 11 +      9903 g---actg-----------tga-cct
i Hipposideros_galeritus.HipGal_scaffold_101188          I 2 C 0
s Hoolock_leuconedys.ctg274                                    440188 14 +    630532 G--AGACCT---------CAGT-CCT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  48485 11 +     55795 g---aaca-----------tga-ctg
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 5 I 12
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            27192  7 -    143317 G---A---------------TC-TCC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      85356  7 +    135385 a---c---------------ag-tct
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7525396 13 -   7955117 G---A----CT--GC-AT--TA-Cct
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                2230 12 -     31341 g---aacg-----------tgaacct
i Inia_geoffrensis.IniGeo_flattened_line_34779           I 5 C 0
s Jaculus_jaculus.JH725527.1                               8278924  4 -   9596543 ---------------------G-CCC
i Jaculus_jaculus.JH725527.1                             C 0 I 7
s Kogia_breviceps.KogBre_flattened_line_81059                 1969 12 -     18011 g---aacg-----------tgaacct
i Kogia_breviceps.KogBre_flattened_line_81059            I 5 C 0
s Lagothrix_lagothricha.k141_1005387                         17894 14 -     38430 G--AGATCT---------CACT-CCT
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    20390 11 -     42476 g---agca-----------tga-gtt
i Lasiurus_borealis.LasBor_scaffold_32767                I 2 C 0
s Leontocebus_fuscicollis.k141_1820339                        9527 14 +     64341 G--AGATCT---------CACT-Cct
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           1869 14 -     35062 G--AGATCT---------CACT-CCT
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        9556 14 +     35603 G--AGATCT---------CACT-CCT
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    31172 14 +     38576 G--AGATCT---------CACT-Cct
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         27876 14 +     66356 G--AGATCT---------CACT-Cct
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3059155 11 +   3914936 g---aaca-----------tga-ccg
i Leptonychotes_weddellii.KB714746.1                     I 13828 I 12
s Lipotes_vexillifer.KE559953.1                             271501 12 -    662738 g---aacg-----------tgaacct
i Lipotes_vexillifer.KE559953.1                          I 5 C 0
s Lophocebus_aterrimus.ctg367                              1442469 14 +   1826925 g--agacct---------cagg-cct
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                17958926 11 -  59628241 g---aaca-----------caa-ctg
i Lycaon_pictus.CM007581.1                               I 5 I 12
s Macaca_arctoides.k141_2326796                              12280 14 +     40492 g--agacct---------cagg-cct
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59681530 14 +  60120075 g--agacct---------cagg-cct
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 18076 14 -     26193 g--agacct---------cagg-cct
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            85851 14 -    114318 g--agacct---------cagg-cct
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 11542 14 -     23192 g--agacct---------cagg-cct
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                21007 14 -     29190 g--agacct---------cagg-cct
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  29586 14 +     37952 g--agacct---------cagg-cct
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186844659 14 + 187317192 G--AGACCT---------CAGG-CCT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25463240 14 -  25927173 G--AGACCT---------CAGG-CCT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  85444 14 +     89720 g--agacct---------cagg-cct
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                12456 14 +     20474 g--agacct---------cagg-cct
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  12230 14 -     14993 g--agacct---------cagg-cct
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  335093 14 -    668171 g--agacct---------cagg-cct
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                10520 14 -     24072 g--agacct---------cagg-cct
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               31151 14 -     45290 g--agacct---------cagg-cct
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                  5959 11 +    270270 g---gatg-----------tga-ctt
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 2 C 0
s Mandrillus_leucophaeus.scaffold280                      23942742 14 -  24302211 G--AGACCT---------CAGT-CCT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356850 14 +    752769 g--agacct---------cagg-cct
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33106479 13 -  40650429 G---A----CT--GC-AT--TA-Cct
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        16527 11 -    207569 g---aaca-----------tga-cct
i Megaderma_lyra.MegLyr_scaffold_4542                    I 2 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             12806 11 +     13704 g---aaca-----------tga-cca
i Mellivora_capensis.MelCap_flattened_line_69365         I 5 I 6
s Meriones_unguiculatus.MerUng_scaffold_7390                 37531 13 +    140813 G---A----GT--GT-GC--TG-Cct
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    6662 12 +     10310 g---aacg-----------tgaacct
i Mesoplodon_bidens.MesBid_scaffold_108144               I 5 C 0
s Mico_argentatus.k141_1024458                                 788 14 -     20047 G--AGATCT---------CACT-CCT
i Mico_argentatus.k141_1024458                           C 0 C 0
s Mico_humeralifer.k141_1346949                               1201 14 +      1399 G--AGATCT---------CACT-CCT
i Mico_humeralifer.k141_1346949                          C 0 C 0
s Mico_schneideri.k141_916733                                        788 14 +      5107 G--AGATCT---------CACT-CCT
i Mico_schneideri.k141_916733                                  C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1853708 11 +   8254450 g---aacg-----------tga-cct
i Miniopterus_natalensis.LDJU01000034.1                  I 2 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             37386 11 +     64694 g---aacg-----------tga-cct
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 2 C 0
s Miopithecus_ogouensis.k141_534055                          14417 14 -     28506 G--AGATCT---------CAGT-CCT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_55178          342 11 +     26817 g---aaca-----------tga-ccg
i Mirounga_angustirostris.MirAng_flattened_line_55178    N 0 I 12
s Monodon_monoceros.MonMon_M_scaffold_103                    30407 12 -    437263 g---aacg-----------tgaacct
i Monodon_monoceros.MonMon_M_scaffold_103                I 5 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 144420 11 -    366855 G---AAGG-----------TGA-TGt
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 2 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   4721 11 +     82753 g---aacg-----------tga-cct
i Moschus_moschiferus.MosMos_scaffold_13123              I 5 C 0
s Mungos_mungo.MunMun_flattened_line_40893                     522 11 +      5729 g---aaca-----------tga-cgg
i Mungos_mungo.MunMun_flattened_line_40893               I 5 I 12
s Murina_feae.MurFea_scaffold_85699                          10955  5 +     14753 --------------------ga-cct
i Murina_feae.MurFea_scaffold_85699                      I 8 C 0
s Mus_caroli.LT608237.1                                   84365123 13 - 120012414 G---A----CT--GT-GC--TG-CTC
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87654527 13 - 129401213 G---A----CT--GT-GC--TG-CCC
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31359229 13 -  89631738 G---A----CTATG---C--TG-CTC
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90757314 13 - 130317789 G---A----CT--GT-GC--TG-CCC
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              8869 15 +     14296 GAG-A----CT--GA-AC--TA-CCc
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               304117 11 -  14710649 g---aaca-----------tga-cca
i Mustela_putorius.JH418006.1                            I 5 I 6
s Myocastor_coypus.MyoCoy_scaffold_10123                     73705  7 -     80779 G---A---------------AC-TCT
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                284431 11 -  10118263 g---aatg-----------tga-cct
i Myotis_brandtii.KE162005.1                             I 2 C 0
s Myotis_davidii.KB100139.1                                1591749 11 -   6019432 g---aatg-----------tga-cct
i Myotis_davidii.KB100139.1                              I 2 C 0
s Myotis_lucifugus.GL429869.1                              3907850 11 -   4330536 g---aacg-----------tga-cct
i Myotis_lucifugus.GL429869.1                            I 2 C 0
s Myotis_myotis.MyoMyo_scaffold_44643                         2406 11 +     25416 a---aacg-----------tga-cct
i Myotis_myotis.MyoMyo_scaffold_44643                    I 2 C 0
s Nannospalax_galili.KL204047.1                            2040081  3 -   3037898 -----------------------TCC
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               20482 14 +     21681 G--AGACCT---------CAGT-CCT
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20310095 11 +  31847680 g---aaca-----------tga-ccg
i Neomonachus_schauinslandi.NINY01007730.1               I 312 I 12
s Neophocaena_asiaeorientalis.KZ687982.1                   5869372 12 +   7148211 g---aacg-----------tgaacct
i Neophocaena_asiaeorientalis.KZ687982.1                 I 5 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    760645 11 +    783361 g---aacg-----------tgg-cct
i Noctilio_leporinus.NocLep_scaffold_251                 I 2 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9152843 11 -   9404916 g---aaca-----------caa-ctg
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 5 I 12
s Ochotona_princeps.JH802162.1                             1368112 13 +   3988456 G---TTTAT---------ACTA-TCC
i Ochotona_princeps.JH802162.1                           C 0 I 11
s Odobenus_rosmarus.KB229312.1                              508934  9 -   2017862 G---AACG-----------CGA-c--
i Odobenus_rosmarus.KB229312.1                           I 5 C 0
s Odocoileus_virginianus.KZ100018.1                         148097 11 +    630418 g---aatg-----------tga-cct
i Odocoileus_virginianus.KZ100018.1                      I 5 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          82485 11 -    150152 g---aacg-----------tga-cct
i Okapia_johnstoni.LVCL01S0005463.1                      I 5 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    84403  8 +    102263 G---A----C----------TG-TCC
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2785263 12 -  10937097 g---aacg-----------tgaacct
i Orcinus_orca.KB316932.1                                I 5 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       466270 11 -    559221 g---aaca-----------caa-ctg
i Otocyon_megalotis.JAEUCK010005147.1                    I 5 I 12
s Ovis_aries.CM001607.2                                   17590933 11 +  44047080 g---aacg-----------tga-cct
i Ovis_aries.CM001607.2                                  I 5 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      179084 11 -    191736 g---aacg-----------tga-cct
i Ovis_canadensis.OviCan_scaffold_2572                   I 5 C 0
s Pan_paniscus.KQ411613.1                                    48723 14 +     80009 G--AGACCT---------CAGT-CCT
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03002948.1                             24647 16 +     28717 G-GAGACCT-T-------CAGT-CCT
i Pan_troglodytes.NBAG03002948.1                         I 86 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  154339 11 +    230217 a---aaca-----------tga-ctg
i Panthera_onca.PanOnc_flattened_line_3271               I 5 I 12
s Panthera_pardus.KV860321.1                                267655 11 +  18783137 a---aaca-----------tga-ctg
i Panthera_pardus.KV860321.1                             I 5 I 12
s Panthera_tigris.KE722367.1                               4724475 11 -   8748460 a---aaca-----------tga-ctg
i Panthera_tigris.KE722367.1                             I 5 I 12
s Pantholops_hodgsonii.KE114653.1                          1269814 11 -   2937107 g---aatg-----------tga-cct
i Pantholops_hodgsonii.KE114653.1                        I 5 C 0
s Papio_anubis.CM001495.2                                183448658 14 + 183742232 G--AGACCT---------CAGG-CCT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            12189 14 +     20448 g--agacct---------cagg-cct
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20569000 14 +  20919399 g--agacct---------cagg-cct
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                  10946 14 +     41871 g--agacct---------cagg-cct
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    14224 14 +     27711 g--agacct---------cagg-cct
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  5223 14 -     11374 g--agacct---------cagg-cct
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15765 10 -     78924 G---AACG-----------TAA-CT-
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 5 C 0
s Peromyscus_maniculatus.KI615324.1                       18215148 13 -  18517816 G---A----CTATG---C--TG-TCC
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_221660                     1142  7 -      2102 G---A---------------TC-CTG
i Petromus_typicus.PetTyp_scaffold_221660                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              12334 12 +     63832 g---aacg-----------tgaacct
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 5 C 0
s Piliocolobus_badius.k141_1142974                            3586 14 +     68526 g--agacct---------cagt-cct
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        43723 14 +     89929 g--agacct---------cagt-cct
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            45139 14 +     51399 g--agacct---------cagt-cct
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14301375 14 -  14605196 G--AGACCT---------CAGT-CCT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             5730 11 +     22620 g---agcg-----------tga-cct
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 2 C 0
s Pithecia_albicans.k141_1476471                              7116 14 +     26961 g--agatct---------cacg-cct
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          3243 14 +     23417 g--agatct---------cacg-cct
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                7108 14 +     29694 G--AGATCT---------CACG-CCT
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          32134 14 +     52772 g--agatct---------cacg-cct
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           7130 14 +     26198 g--agatct---------cacg-cct
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3943660 14 +   4542175 g--agatct---------cacg-cct
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            7094 14 -     23490 g--agatct---------cacg-cct
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610           1874 12 +      7680 g---aaca-----------tgaacct
i Platanista_gangetica.PlaMin_flattened_line_173610      I 5 I 12
s Plecturocebus_bernhardi.k141_2549090                       11355 14 -     39866 G--AGAGCT---------CACT-CCT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        20518 14 +     34906 G--AGAGCT---------CACT-CCT
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       24780 14 +     87950 g--agagct---------cact-cct
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     25607 14 +     88961 g--agagct---------cact-cct
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         11277 14 +     39403 G--AGAGCT---------CACT-CCT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          25060 14 -     87928 g--agagct---------cact-cct
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         32022 14 +     60166 G--AGAGCT---------CACT-CCT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      32218 14 +     67232 g--agagct---------cact-cct
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          27691 14 +     90634 g--agagct---------cact-cct
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          25064 14 -     89403 g--agagct---------cact-cct
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189136511 14 + 189387572 G--AGACCT---------CAGT-CCT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9576121 14 +   9816681 G--AGACCT---------CAGT-CCT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               78663 14 -     81375 G--AGACCT---------CAGT-CCT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                             10499 14 +     19060 g--agacct---------cagt-cct
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            15162  5 -     21651 --------------------TG-Cct
i Psammomys_obesus.NESX01036370.1                        I 2 C 0
s Pteronotus_parnellii.KE909381.1                            17967 11 -     21811 g---aacg-----------tga-cct
i Pteronotus_parnellii.KE909381.1                        I 2 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_76658           975 11 -      3818 g---aaca-----------tga-ccc
i Pteronura_brasiliensis.PteBra_flattened_line_76658     I 5 I 6
s Pteropus_alecto.KB030862.1                              22987364 11 +  28871421 g---gata-----------tga-ctt
i Pteropus_alecto.KB030862.1                             I 2 C 0
s Pteropus_vampyrus.KN525825.1                             1370924 11 +   4952924 g---gatg-----------tga-ctt
i Pteropus_vampyrus.KN525825.1                           I 2 C 0
s Puma_concolor.QAVW01001104.1                            20277545 11 -  38429054 g---agcg-----------tga-ctg
i Puma_concolor.QAVW01001104.1                           I 5 I 12
s Pygathrix_cinerea.k141_1153803                             20476 14 -     91421 G--AGACCT---------CAGT-CCT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7614601 14 +   7812017 G--AGACCT---------CAGT-CCT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             20506 14 -     72585 G--AGACCT---------CAGT-CCT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  9935 11 +     55207 g---aatg-----------tga-cct
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 5 C 0
s Rattus_norvegicus.chr16                                 53574556 13 +  90668790 G---A----CT--GT-GC--TG-CCC
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        370123 11 -   3329780 g---aatg-----------tga-cct
i Rhinolophus_sinicus.LVEH01000134.1                     I 2 C 0
s Rhinopithecus_bieti.k119_1041714                            1069 14 +      5697 G--AGACCT---------CAGT-CCT
i Rhinopithecus_bieti.k119_1041714                       C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91241542 14 - 195417433 G--AGACCT---------CAGT-CCT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7677191 14 +   7961872 G--AGACCT---------CAGT-CCT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_301684                 196 11 +       280 G---GAGG-----------TGA-CTT
i Rousettus_aegyptiacus.RouAeg_scaffold_301684           I 2 C 0
s Saguinus_bicolor.k141_8081                                  2837 14 +     42994 G--AGATCT---------CACT-CCT
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                             1511 14 +      2253 G--AGATCT---------CACT-CCT
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               1960 14 -      8737 G--AGATCT---------CACT-CCT
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                              1592 14 +      2343 G--AGATCT---------CACT-CCT
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209476494 14 + 209938924 G--AGATCT---------CACT-Cct
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                 919 14 -      7576 G--AGATCT---------CACT-CCT
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_133311                       2391 11 +      9503 g---aacg-----------tga-cct
i Saiga_tatarica.SaiTat_scaffold_133311                  I 5 C 0
s Saimiri_boliviensis.NW_024100920.1                     119952562 14 - 121099817 G--AGATCT---------CACT-CCT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24904 14 +     46362 G--AGATCT---------CACT-CCT
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               24999 14 +     45824 G--AGATCT---------CACT-CCT
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             41677 14 -     64574 G--AGATCT---------CACT-CCT
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4751 14 -     23631 G--AGATCT---------CACT-CCT
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 24895 14 -     61129 G--AGATCT---------CACT-CCT
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5422227 14 -   5703754 G--GGAGCT---------CACT-CCT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          57468 14 -     80660 G--GGAGCT---------CACT-CCT
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Semnopithecus_entellus.k141_1672505                         5335 14 -     12572 G--AGACCT---------CAGT-CCT
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      32188 14 +     39453 G--AGACCT---------CAGT-CCT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           12692 14 +     27826 G--AGACCT---------CAGT-CCT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            12238 14 -     19483 G--AGACCT---------CAGT-CCT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      5534 14 -     12762 G--AGACCT---------CAGT-CCT
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           5377 14 +     13763 G--AGACCT---------CAGT-CCT
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     4361 13 -     30804 G---A----CTATG---C--TG-TCC
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               5059 11 +   1910179 g---aatg-----------tta-cct
i Solenodon_paradoxus.SolPar_flattened_line_126          I 2 C 0
s Spermophilus_dauricus.KZ294078.1                         1957280 13 -   3870691 G---A----CT--GC-AT--TA-Cct
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             33230 11 +     97271 g---agcc-----------tga-cct
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 5 I 6
s Suricata_suricatta.SurSur_flattened_line_6629              21789 11 -    196729 g---aaca-----------tga-ctg
i Suricata_suricatta.SurSur_flattened_line_6629          I 5 I 12
s Sus_scrofa.CM000828.4                                    6814888  7 +  69701581 -------G-----------TGA-Cct
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                14487 10 +     41958 g---aa-g-----------gga-cct
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 2 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      122141 11 -    156842 g---aatg-----------tga-cct
i Tapirus_indicus.TapInd_scaffold_9301                   I 5 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    390622 11 +    539355 g---aatg-----------tga-cct
i Tapirus_terrestris.TapTer_scaffold_755                 I 5 C 0
s Tarsius_lariang.k141_2201908                               29237 14 +     70052 G--CTGTGG---------CCCT-CTG
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                4033 14 -     16117 G--CTATGG---------CCCT-CTG
i Tarsius_wallacei.k141_254427                           C 0 I 12
s Theropithecus_gelada.CM009954.1                        186433851 14 + 186847797 G--AGACCT---------CAGT-CCT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              107970  7 +    114563 T---A---------------TC-TTG
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_85600                    5645 11 +     18632 g---agag-----------gga-cct
i Tolypeutes_matacus.TolMat_scaffold_85600               I 2 C 0
s Trachypithecus_auratus.k141_722599                         16274 14 -     20410 G--AGACCT---------CAGT-CCT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      5394 14 -     12674 G--AGACCT---------CAGT-CCT
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       16382 14 +     19930 G--AGACCT---------CAGT-CCT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      12782 14 -     19997 G--AGACCT---------CAGT-CCT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            52925 14 -     60166 G--AGACCT---------CAGT-TCT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        20388 14 -     27529 G--AGACCT---------CAGT-CCT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                       2016 14 +      9229 G--AGACCT---------CAGT-CCT
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          13915 14 -     21137 G--AGACCT---------CAGT-CCT
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                    2020 14 +      9131 G--AGACCT---------CAGT-CCT
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                         1979 14 -      3730 G--AGACCT---------CAGT-CCT
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        30248 14 +     32220 G--AGACCT---------CAGT-CCT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5944346 14 +   6242583 G--AGACCT---------CAGT-CCT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       13603 14 +     20839 G--AGACCT---------CAGT-CCT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    3814 11 +     27266 g---aatg-----------tga-cct
i Tragulus_javanicus.TraJav_scaffold_40725               I 5 C 0
s Tupaia_chinensis.KB320699.1                              2166392 13 +   4065304 G---ACTGT---------GCTA-ATC
i Tupaia_chinensis.KB320699.1                            I 2 C 0
s Tupaia_tana.TupTan_flattened_line_394                       2761 13 +     70247 G---ACTGC---------ACTA-ATC
i Tupaia_tana.TupTan_flattened_line_394                  I 2 C 0
s Tursiops_truncatus.MRVK01000835.1                       15741515 12 +  33153633 g---aacg-----------tgaacct
i Tursiops_truncatus.MRVK01000835.1                      I 5 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   57616 11 -     77625 g---aaca-----------aga-cct
i Uropsilus_gracilis.UroGra_scaffold_12083               I 2 C 0
s Ursus_maritimus.KK499267.1                               4852879 11 -   5085361 g---aaag-----------tga-cca
i Ursus_maritimus.KK499267.1                             I 5 I 12
s Vulpes_lagopus.VulLag_flattened_line_30954                 14384 11 -     43706 g---aaca-----------caa-ctg
i Vulpes_lagopus.VulLag_flattened_line_30954             I 5 I 12
s Xerus_inauris.XerIna_scaffold_2302                          4315 13 +    224448 G---A----CT--GC-AT--TA-Cct
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      17647  4 +     63895 ---------------------A-TCC
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 7
s Ziphius_cavirostris.ZipCav_flattened_line_1424488            151 12 -       542 g---aacg-----------tgaacct
i Ziphius_cavirostris.ZipCav_flattened_line_1424488      I 5 C 0
e Cheracebus_torquatus.k141_1170026                          64344 81 +     76511 I
e Cheracebus_regulus.k141_471822                            159875 81 -    216457 I
e Cheracebus_lugens.k141_1393925                              2308 81 +     17877 I
e Cheracebus_lucifer.k141_49986                               2432 81 -     17098 I
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Otolemur_garnettii.GL873799.1                             699441  0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7202  0 +      8798 C
e Galago_senegalensis.k141_631886                             7400  0 +     11339 C
e Galago_moholi.ctg2040                                     429710  0 -    453645 C
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Loris_tardigradus.ctg83                                  1015445  0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17734  0 -     33856 C
e Perodicticus_potto.k141_1186926                              597  0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            219  0 -      3244 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vicugna_pacos.KN270157.1                                 5374276 47 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tonatia_saurophila.TonSau_scaffold_294                     83346 714 +    610378 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Sorex_araneus.JH798187.1                                13653314 9235 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    156307 109 -    313613 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                       107181400  0 - 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Ondatra_zibethicus.OndZib_scaffold_7387                      632 3336 +    140218 I
e Octodon_degus.JH651603.1                                  750513 17 +  11899542 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869  0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1414  0 -      5837 C
e Nycticebus_bengalensis.LG01                            102595947  0 - 196305487 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                18000 920 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184766 1004 -  29670104 I
e Manis_pentadactyla.KN006162.1                              54034 31 -    317179 I
e Manis_javanica.JSZB01003497.1                              21892 31 +    737560 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     5119  0 +     14121 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20664195 469 +  22651954 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Galagoides_demidoff.k141_1711393                            4689  0 +     41679 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    39057 4687 +     67921 I
e Desmodus_rotundus.KZ672289.1                             8632254 708 +  20541912 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1255607 4808 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Carollia_perspicillata.CarPer_scaffold_92756                7250 707 -     11696 I
e Camelus_ferus.KB017975.1                                  405530 47 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2337232 47 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10004760 47 -  17673402 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6909 705 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         538  0 +      5281 C
e Anoura_caudifer.AnoCau_scaffold_1412                      187499 706 +    412891 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      11389 31 +     62944 C-----C-------AG---AGGACACC----TGG----TTGC--GCT--TGC-G-TCTGC
s Acinonyx_jubatus.LLWD01001279.1                           835176 16 -   1699592 ---------------------------------------tga--gac--tacag-ttttc
i Acinonyx_jubatus.LLWD01001279.1                        I 11 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     74621 28 +     87051 C-----C-------AG---AGGC--------TGG----CTTA--GTT--TACAC-TCTCC
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 1
s Ailuropoda_melanoleuca.LNAT01000098.1                    9513123 16 -  29979442 ---------------------------------------tga--gtt--tgcat-tctgg
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 12 C 0
s Ailurus_fulgens.LNAC01001112.1                             82028 16 -    347723 ---------------------------------------tga--gct--tgctt-tctgg
i Ailurus_fulgens.LNAC01001112.1                         I 6 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     76186 16 -     89534 --------------------------------------TTGA--GTT--GACAT-TCTC-
i Allactaga_bullata.AllBul_scaffold_9566                 I 7 C 0
s Allenopithecus_nigroviridis.k141_3361533                   19986 31 -     52922 C-----C-------AG---gggccacc----tgg----ttgc--gct--tgc-t-tctgc
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         19917 31 -     28001 C-----C-------AG---gggccacc----tgg----ttgc--gct--tgc-t-tctgc
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                         10404 31 -     18505 C-----C-------AG---gggccacc----tgg----ttgc--gct--tgc-t-tctgc
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                          11269 31 -     12518 C-----C-------AG---gggccacc----tgg----ttgc--gct--tgc-t-tctgc
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             11608 31 +     51355 c-----g-------ag---aagccacc----tgg----ttgc--att--tgc-t-tctgc
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                4719 31 -     36483 c-----g-------ag---aagccacc----tgg----ttgc--att--tgc-t-tctgc
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              15171 31 +     28687 c-----g-------ag---aagccacc----tgg----ttgc--att--tgc-t-tctgc
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 3644 31 +     27940 c-----g-------ag---aagccacc----tgg----ttgc--att--tgc-t-tctgc
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            4732 31 -      9457 c-----g-------ag---aagccacc----tgg----ttgc--att--tgc-t-tctgc
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             3690 31 +     30492 c-----g-------ag---aagccacc----tgg----ttgc--att--tgc-t-tctgc
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              7911 31 +     47717 c-----g-------ag---aagccacc----tgg----ttgc--att--tgc-t-tctgc
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              4412 31 +      5663 c-----g-------ag---aagccacc----tgg----ttgc--att--tgc-t-tctgc
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             18863 31 +     50774 c-----g-------ag---aagccacc----tgg----ttgc--att--tgc-t-tctgc
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          680826 17 -   2318259 c-----c-------ag---ggctagac----agt----ct--------------------
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 9
s Antilocapra_americana.AntAmePen_scaffold_43303              2096 17 -     32520 c-----c-------ag---ggccagac----agt----ct--------------------
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 I 9
s Aotus_azarae.k141_3104676                                  17404 31 -     33861 c-----c-------ag---aggcaacc----tgg----tggc--att--tgc-t-tctgc
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            17402 31 -     34016 C-----C-------AG---AGGCAACC----TGG----TGGC--ATT--TGC-T-TCTGC
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299829 31 -   5030052 C-----C-------AG---AGGCAACC----TGG----TGGC--ATT--TGC-T-TCTGC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             17438 31 -     34685 C-----C-------AG---AGGCAACC----TGG----TGGC--ATT--TGC-T-TCTGC
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               30562 31 -     47192 c-----c-------ag---aggcaacc----tgg----tggc--att--tgc-t-tctgc
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      15846 32 +     20879 C-----C-------AG---AGGTCAAC----CGT----CTGA--GTT--TGCAT-TCTGG
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_1648548                         538 19 +      5281 -------------------------------TGT----CCGA--ATT--TGC-A-TCAAG
i Arctocebus_calabarensis.k141_1648548                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21212090 31 -  21539123 c-----g-------ag---aggccacc----tgg----ttac--att--tgc-t-tctgc
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               46889 31 -     48001 t-----g-------ag---aggccacc----tgg----ttac--att--tgc-t-tctgc
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 29690 31 -     30947 t-----g-------ag---aggccacc----tgg----ttac--att--tgc-t-tctgc
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               11465 31 -     89868 c-----g-------ag---aggccacc----tgg----ttac--att--tgc-t-tctgc
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              15847 31 -     40414 t-----g-------ag---aggccacc----tgg----ttac--att--tgc-t-tctgc
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                23735 31 +     72325 t-----g-------aa---aggccacc----tgg----ttac--att--tgc-t-tctgc
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15195160 32 +  23207421 c-----c-------ag---ggccagactgtct--------ga--gtt--tgcat-tcagg
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         5625 32 -     18090 c-----c-------ag---ggccagactgtct--------ga--gtt--tgcat-tcagg
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    31906 17 +     34529 c-----c-------ag---ggctagac----agt----ct--------------------
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 9
s Bison_bison.KN261452.1                                    204541 17 -    288883 c-----c-------aa---ggccagac----aat----ct--------------------
i Bison_bison.KN261452.1                                 C 0 I 9
s Bos_indicus.CM003047.1                                  20277778 17 +  48749331 c-----c-------ag---ggccagac----aat----ct--------------------
i Bos_indicus.CM003047.1                                 C 0 I 9
s Bos_mutus.JH880303.1                                     1130332 17 -   1948126 c-----c-------ag---ggccagac----aat----ct--------------------
i Bos_mutus.JH880303.1                                   C 0 I 9
s Bos_taurus.CM000203.6                                   18088416 17 +  45695690 c-----c-------ag---ggccagac----aat----ct--------------------
i Bos_taurus.CM000203.6                                  C 0 I 9
s Bubalus_bubalis.KI419123.1                               2824368 17 +   4408762 c-----c-------ag---ggccagac----aat----ct--------------------
i Bubalus_bubalis.KI419123.1                             C 0 I 9
s Cacajao_ayresi.k141_552049                                104730 15 -    122966 c-----g-------ag---aggcctcc----tgg--------------------------
i Cacajao_ayresi.k141_552049                             C 0 I 10
s Cacajao_calvus.k141_5142                                   64233 15 +     81800 c-----g-------ag---aggcctcc----tgg--------------------------
i Cacajao_calvus.k141_5142                               C 0 I 10
s Cacajao_hosomi.k141_81245                                  33415 15 -     95584 c-----g-------ag---aggcctcc----tgg--------------------------
i Cacajao_hosomi.k141_81245                              C 0 I 10
s Cacajao_melanocephalus.k141_619699                         57515 15 -    119600 c-----g-------ag---aggcctcc----tgg--------------------------
i Cacajao_melanocephalus.k141_619699                     C 0 I 10
s Callibella_humilis.k141_10318                               1166 31 +     27907 C-----G-------AG---ATGCCACC----TGC----TTGC--ATT--TGC-T-TCTGC
i Callibella_humilis.k141_10318                          C 0 C 0
s Callimico_goeldii.k141_737284                                807 31 -     31217 C-----G-------AG---AGGCCACC----TGG----TTGC--ATT--TGC-T-TCCGC
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                             1102 31 +      5377 C-----G-------AG---ACGCCACc----tgc----ttgc--att--tgc-t-tctgc
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592963 31 - 189096842 C-----G-------AG---ACGCCACC----TGC----TTGC--ATT--TGC-T-TCTGC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1777 31 -     12329 C-----G-------AG---ACGCCACC----TGC----TTGC--ATT--TGC-T-TCTGC
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s CanFam4.chr16                                           17802792 16 -  60362399 ---------------------------------------tga--gtt--tgcat-tctgg
i CanFam4.chr16                                          I 12 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     3538 16 -     43241 ---------------------------------------tga--gtt--tgcat-tctgg
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 12 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9038233 16 -   9314153 ---------------------------------------tga--gtt--tgcat-tctgg
i Canis_lupus_dingo.QKWQ01000480.1                       I 12 C 0
s Canis_lupus_familiaris.chr16                            17962709 16 -  59632846 ---------------------------------------tga--gtt--tgcat-tctgg
i Canis_lupus_familiaris.chr16                           I 12 C 0
s Canis_lupus_orion.HG994398.1                            18504006 16 +  63665305 ---------------------------------------tga--gtt--tgcat-tctgg
i Canis_lupus_orion.HG994398.1                           I 12 C 0
s Capra_aegagrus.CM003241.1                               18834851 17 +  46296322 t-----c-------ag---ggctagac----agt----cc--------------------
i Capra_aegagrus.CM003241.1                              C 0 I 9
s Capra_hircus.CM004588.1                                 18065652 17 -  44709034 t-----c-------ag---ggctagac----agt----cc--------------------
i Capra_hircus.CM004588.1                                C 0 I 9
s Capromys_pilorides.CapPil_scaffold_65020                    3532 36 -     12242 T-----CATCTA-TAT---TGGCCAAC----TGT----CAGA----C--TACat-tctga
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           158765 13 -    496798 -----------------------------------------C--AGT--TGC-T-GCTGG
i Carlito_syrichta.NW_007259797.1                        I 12 C 0
s Castor_canadensis.CasCan_scaffold_2074                    140281 32 +    179628 C-----C-------AG---AGGCCAAC----TTT----CTGA--GTT--TGCAT-cctct
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     97299 32 +    217609 c-----c-------ag---ggccagac----tgt----ctga--gtt--tgcat-tctag
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18352112 38 -  23392119 T-----CATC-ACTAG---TGGTCAac----tat----ttgggt--t--tacat-tctgg
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18364372 38 -  23407841 T-----CATC-ACTAG---TGGTCAac----tgt----ttgggt--t--tacat-tctgg
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                       103254 38 +    143979 T-----CATC-ACTAG---TGGTCAac----tgt----ttgggt--t--tacat-tctgg
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cebuella_pygmaea.k141_793006                                 803 31 -     15088 C-----G-------AG---ACGCCACC----TGC----TTGC--ATT--TGC-T-TCTGC
i Cebuella_pygmaea.k141_793006                           C 0 C 0
s Cebus_albifrons.Contig27                                25654283 31 +  26074798 c-----g-------ag---aggccacc----tgg----ttgc--att--tGC-T-TCTGC
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                2221 31 +     28840 C-----G-------AG---AGGCCACC----TGG----TTGC--ATT--TGC-T-TCTGC
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 1950 31 +     14051 C-----G-------AG---AGGCCACC----TGG----TTGC--ATT--TGC-T-TCTGC
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         8569 13 +     31688 -----------------------------------------C--AGT--TGC-T-Gctgg
i Cephalopachus_bancanus.k141_1423433                    I 12 C 0
s Ceratotherium_simum.JH767749.1                          12234838 32 +  27778364 c-----c-------ag---agacagac----tgt----gtga--gtt--tgcat-tctgg
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5861 32 -     25243 c-----c-------ag---agacagac----tgt----gtga--gtt--tgcat-tctgg
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4480934 31 +   4669795 C-----C-------AG---AGGCCACC----TGG----TTGC--GCT--TGC-T-TCTGC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        5435 31 +     17872 c-----c-------ag---aggccacc----tgg----ttgc--gct--tgc-t-tctgc
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           6023 31 -     14043 c-----c-------ag---aggccacc----tgg----ttgc--gct--tgc-t-tctgc
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          14122 31 +     27781 c-----c-------ag---aggccacc----tgg----ttgc--gct--tgc-t-tctgc
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        14282 31 -     20310 c-----c-------ag---aggccacc----tgg----ttgc--gct--tgc-t-tctgc
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          17255 31 +     29689 c-----c-------ag---aggccacc----tgg----ttgc--gct--tgc-t-tctgc
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           12014 31 -     20078 C-----C-------AG---AGGCCacc----tgg----ttgc--act--tgc-t-tctgc
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          19928 31 -     27936 C-----C-------AG---AGGCCacc----tgg----ttgc--gct--tgc-t-tctgc
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            8801 31 -     17152 c-----c-------ag---aggccgcc----tgg----ttgc--gct--tgc-t-tctgc
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38828528 31 +  39242232 c-----c-------ag---aggccacc----tga----ttgc--gct--tgc-t-tctgc
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21228033 31 -  21565898 c-----c-------ag---aggccgcc----tgg----ttgc--gct--tgc-t-tctgc
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       45145 31 -     53127 c-----c-------ag---aggccacc----tgg----ttgc--gct--tgc-t-tctgc
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        5406 31 +     13442 c-----c-------ag---aggccagc----tgg----ttgc--gct--tgc-t-tctgc
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       19948 31 -     27947 c-----c-------ag---aggccgcc----tgg----ttgc--gct--tgc-t-tctgc
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         2976 31 +     10558 c-----c-------ag---aggccacc----tgg----ttgc--gct--tgc-t-tctgc
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          5979 31 +     14005 C-----C-------AG---AGGCCacc----tgg----ttgc--act--tgc-t-tctgc
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            7554 32 -      8501 c-----c-------aa---aacttgct----tgt----ctga--ggt--cacag-tctgg
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Chiropotes_albinasus.k141_2206961                           2586 15 -     15524 T-----G-------AG---AGGCCACC----TGG--------------------------
i Chiropotes_albinasus.k141_2206961                      C 0 I 16
s Chiropotes_israelita.k141_747660                          101858 15 +    146308 c-----g-------ag---aggcctcc----tgg--------------------------
i Chiropotes_israelita.k141_747660                       C 0 I 10
s Chiropotes_sagulatus.k141_1421488                          33665 15 -     50570 c-----g-------ag---aggcctcc----tgg--------------------------
i Chiropotes_sagulatus.k141_1421488                      C 0 I 10
s Chlorocebus_aethiops.ctg25                              18433851 31 -  18827391 C-----C-------AG---gggccacc----tgg----ttgt--gct--tgc-t-tctgc
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       20347 31 -     50209 C-----C-------AG---gggccacc----tgg----ttgt--gct--tgc-t-tctgc
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135427353 31 + 135778131 C-----C-------AG---GGACCACC----TGG----TTGC--gcc--tgc-t-tctgc
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1915889 31 +   2368649 G-----C-------AG---AGGACACC----TGG----TTGC--GCT--TGC-T-TCTGC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199954130 31 + 200372422 G-----C-------AG---AGGACACC----TGG----TTGC--GCT--TGC-T-TCTGC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              42439 31 +     84244 G-----C-------AG---AGGACACC----TGG----TTGC--GCT--TGC-T-TCTGC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17552803 32 -  53390261 c-----a-------aa---cgcaagaa----tgc----ctga--gtt--tgcat-tcaaa
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           4025 32 +     23735 c-----t-------gg---agtccagc----tgt----ctgg--gtt--ggcat-tctgg
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 54078 28 +     63868 A-----T-------AG---aggc--------tgg----ctga--gtt--tacat-gctcc
i Cricetomys_gambianus.CriGam_scaffold_18520             I 230 C 0
s Cricetulus_griseus.LT883664.1                           11669608 21 + 224834208 -------------------------------tgc---actaa--gtt--gacac-tctcc
i Cricetulus_griseus.LT883664.1                          I 1 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               6216 20 -     19598 -------------------------------TGC----CTGA--GCT--TGATT-TCAAA
i Crocidura_indochinensis.CroInd_scaffold_37019          I 13 I 661
s Cryptoprocta_ferox.CryFer_flattened_line_16129             31727 16 -     87169 ---------------------------------------tga--ggt--tgcat-tctgg
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 12 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  38463 30 +     51376 --------------AG---TGGCCAAC----TGT----CTAA----CTTTACAt-tctgg
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 8 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900             3092 24 -     75252 -----------------------cagc----tgt----ctgagt--t--tacat-tctgg
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 6 C 0
s Dasypus_novemcinctus.JH564415.1                            70557 32 +   2246927 t-----c-------aa---accttgct----tgg----ctag--ggt--cacag-tttgg
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16815035 32 +  35494412 c-----c-------ag---ggccagac----tgt----ctga--gtt--tgcat-tcagg
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  676680 32 +   1390856 c-----c-------ag---agacggac----tgt----gtga--gtt--tgcat-tctgg
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    9440 32 +    198055 c-----c-------ag---agacagac----tgt----gtga--gtt--tgcat-tctgg
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 35805 38 -     42551 T-----CATC-ACTAG---TGGTCAac----tgt----ctgggt--t--tacat-cctgg
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE797349.1                                    928 32 -     31197 c-----t-------gg---agcctaac----tgt----ctga--gtt--tgcat-tccgg
i Eidolon_helvum.KE797349.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       315302 23 +    607251 cagtcac-------agttctgcca--c----agt----ct--------------------
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 9
s Ellobius_lutescens.LOEQ01008920.1                          24967 20 -    110024 -------------------------------TGC----CTGA--GTT--GACAT-ACTCC
i Ellobius_lutescens.LOEQ01008920.1                      I 19 C 0
s Ellobius_talpinus.LOJH01081419.1                            4896 20 +      8657 -------------------------------tgc----ctga--gtt--gaaat-actcc
i Ellobius_talpinus.LOJH01081419.1                       I 19 C 0
s Enhydra_lutris.KZ291758.1                               16339059 16 -  41312741 ---------------------------------------tga--gtt--tgcat-tctgg
i Enhydra_lutris.KZ291758.1                              I 6 C 0
s Eptesicus_fuscus.JH977646.1                              2150961 25 -  14770903 c-----c-------aa---agccacac----tgt----ctg----tt--tgcat------
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1286973 33 +   4378816 t-----t-------gg---agccagac----tgt----ctga--gtt--tgcatttctgg
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18534782 32 -  39960074 t-----t-------gg---agccagac----tgt----ctga--gtt--tgcat-tctgg
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               36811 32 +    498745 t-----t-------gg---agccagac----tgt----ctga--gtt--tgcat-tctgg
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21210523 31 -  21539334 C-----C-------AG---GGGCCACC----TGG----TTGC--GCT--TGC-T-TCTGC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           14462 28 +    133382 c-----c-------ag---ggccagaa----t--------ga--gtt--tgctt-tcagg
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             28411 28 -     44125 c-----c-------ag---ggccagac----t--------ga--gtt--tgcat-tcagg
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20240308 16 + 206538554 ---------------------------------------tga--gat--tgcag-ctttc
i Felis_catus.CM001381.2                                 I 12 C 0
s Felis_catus_fca126.CM031415.1                           20199180 16 + 205367284 ---------------------------------------tga--gat--tgcag-ctttc
i Felis_catus_fca126.CM031415.1                          I 12 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 12840 16 -     36744 ---------------------------------------tga--gat--tgcag-ctttc
i Felis_nigripes.FelNig_flattened_line_20823             I 12 C 0
s Fukomys_damarensis.KN121974.1                             852904 20 +   3816255 -------------------------------tgt----ctga--gtt--tacat-tctga
i Fukomys_damarensis.KN121974.1                          I 18 C 0
s Galago_moholi.ctg2040                                     429710 19 -    453645 -------------------------------TGT----CTGA--ATT--TGC-A-TCAAG
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             7400 19 +     11339 -------------------------------TGT----CTGA--ATT--TGC-A-TCAAG
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            4689 19 +     41679 -------------------------------TGT----CTGA--ATT--TGC-A-TCAGG
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               5919 32 -      9135 c-----c-------ag---aggctgac----tgc----cctg--gtt--tgcat-tctgg
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     612550 17 -    660261 c-----c-------ag---agccaaac----agt----ct--------------------
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 I 9
s Glis_glis.GliGli_scaffold_19807                            35635 32 +     49224 c-----c-------ag---aggccaac----tct----ctga--gtg--tgaat-tctgt
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              20615 31 -     32273 C-----C-------AG---Aggacacc----tgg----tggc--gct--tgc-c-tctgc
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186342750 31 + 186649187 C-----C-------AG---aggacacc----tgg----tggc--gct--tgc-c-tctgc
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   37259 31 +     78134 A-----A--------g---aggccaac----tgt----ctga--gtg--tgaat-tctgt
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               245538 16 +    327341 ---------------------------------------tga--ggt--tgcat-tctgg
i Helogale_parvula.HelPar_flattened_line_2585            I 12 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 23145 17 +     36099 c-----c-------ag---ggctagac----agt----ct--------------------
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 I 9
s Hippopotamus_amphibius.HipAmp_scaffold_9076               113890 32 +    128679 c-----c-------ag---ggccagac----tgt----caga--gtt--tgcat-tcaag
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       113684 32 +   1711038 c-----c-------gg---agcccaac----tat----ctga--gtt--tgcat-tcttc
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188               2250 32 +      9903 c-----c-------ag---agcccaac----tat----ctga--gtt--tgcat-tctgg
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 C 0
s Hoolock_leuconedys.ctg274                                    440202 30 +    630532 c-----c-------ag---aggccacc----tgg----ttgc--gct---gc-t-tctgc
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  48508 16 +     55795 ---------------------------------------tga--ggt--tgcat-tctgg
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 12 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            27199 38 -    143317 T-----CATC-AGTAG---TGgccaac----tgt----ctgggt--t--tccat-tctgg
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      85363 32 +    135385 t-----c-------ag---gggccaac----tat----ctga--gtt--tacat-tctca
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7525409 32 -   7955117 c-----c-------gg---aggtcaac----tat----ctga--gtt--tgtat-tctag
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                2242 32 -     31341 c-----c-------ag---ggccagac----tgt----ctga--gtt--tgcat-tcagg
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8278935 17 -   9596543 --------------------------------------CTGA--GTT--GACAT-TCTCC
i Jaculus_jaculus.JH725527.1                             I 7 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                 1981 32 -     18011 c-----c-------ag---ggccagac----tgt----ctga--gtt--tgcat-tcagg
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         17908 31 -     38430 T-----G-------AG---AGGCTACC----TGG----TTAC--ATT--TGC-T-TCTGC
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    20401 30 -     42476 c-----c-------ag---agccaaac----cat----ctg----tt--tgcat-tccca
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 275
s Leontocebus_fuscicollis.k141_1820339                        9541 31 +     64341 t-----g-------ag---aggccacc----tgg----ttgc--att--tgc-t-tctgc
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           1883 31 -     35062 T-----G-------AG---AGGCCACC----TGG----TTGC--ATT--TGC-T-TCTGC
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        9570 31 +     35603 T-----G-------AG---AGGCCACC----TGG----TTGC--ATT--TGC-T-TCTGC
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    31186 31 +     38576 c-----c-------gg---aggccacc----tgc----ttac--att--tgc-t-tctgc
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         27890 31 +     66356 c-----c-------gg---aggccacc----tgc----ttac--att--tgc-t-tctgc
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3059178 16 +   3914936 ---------------------------------------tga--gtt--tgcat-tctgg
i Leptonychotes_weddellii.KB714746.1                     I 12 C 0
s Lipotes_vexillifer.KE559953.1                             271513 32 -    662738 c-----c-------ag---ggccagac----tgt----ctga--gtt--tgcat-tcagg
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1442483 31 +   1826925 c-----c-------ag---gggccacc----tgg----ttgc--gct--tgc-t-tctgc
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_399337                            17734 19 -     33856 -------------------------------TGT----CTGA--ATT--TGC-A-TCAGG
i Loris_lydekkerianus.k141_399337                        C 0 C 0
s Loris_tardigradus.ctg83                                  1015445 19 +   6120653 -------------------------------TGT----CTGA--ATT--TGC-A-TCAGG
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17958949 16 -  59628241 ---------------------------------------tga--gtt--tgcat-tctgg
i Lycaon_pictus.CM007581.1                               I 12 C 0
s Macaca_arctoides.k141_2326796                              12294 31 +     40492 c-----c-------ag---gggccacc----tgg----ttgc--gct--tgc-t-tctgc
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59681544 31 +  60120075 c-----c-------ag---gggccacc----tgg----ttgc--gct--tgc-t-tctgc
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 18090 31 -     26193 c-----c-------ag---gggccacc----tgg----ttgc--gct--tgc-t-tctgc
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            85865 31 -    114318 c-----c-------ag---gggccacc----tgg----ttgc--gct--tgc-t-tctgc
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 11556 31 -     23192 c-----c-------ag---gggccacc----tgg----ttgc--gct--tgc-t-tctgc
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                21021 31 -     29190 c-----c-------ag---gggccacc----tgg----ttgc--gct--tgc-t-tctgc
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  29600 31 +     37952 c-----c-------ag---gggccacc----tgg----ttgc--gct--tgc-t-tctgc
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186844673 31 + 187317192 C-----C-------AG---GGGCCACC----TGG----TTGC--GCT--TGC-T-TCTGC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25463254 31 -  25927173 C-----C-------AG---GGGCCACC----TGG----TTGC--GCT--TGC-T-TCTGC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  85458 31 +     89720 c-----c-------ag---gggccacc----tgg----ttgc--gct--tgc-t-tctgc
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                12470 31 +     20474 c-----c-------ag---gggccacc----tgg----ttgc--gct--tgc-t-tctgc
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  12244 31 -     14993 c-----c-------ag---gggccacc----tgg----ttgc--gct--tgc-t-tctgc
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  335107 31 -    668171 c-----c-------ag---gggccacc----tgg----ttgc--gct--tgc-t-tctgc
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                10534 31 -     24072 c-----c-------ag---gggccacc----tgg----ttgc--gct--tgc-t-tctgc
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               31165 31 -     45290 c-----c-------ag---gggccacc----tgg----ttgc--gct--tgc-t-tctgc
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                  5970 32 +    270270 c-----c-------ag---agtcaaac----tgt----ctga--gtt--tgcat-tctgg
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23942756 31 -  24302211 C-----C-------AG---GGGCCACC----TGG----TTGC--GCT--TGC-T-TCTGC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356864 31 +    752769 c-----c-------ag---gggccacc----tgg----ttgc--gct--tgc-t-tctgc
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33106492 32 -  40650429 c-----a-------gg---aggtcaac----tgt----ctga--gtt--tgtat-tatag
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        16538 32 -    207569 c-----c-------ag---agccccac----tgt----ctga--gtt--tgcat-tttgg
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             12823 16 +     13704 ---------------------------------------tga--gtt--tgcat-tctgg
i Mellivora_capensis.MelCap_flattened_line_69365         I 6 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 37544 28 +    140813 c-----t-------ag---aagc--------tag----ctga--gtt--tacat-tcccc
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    6674 32 +     10310 c-----c-------ag---ggccagac----tgt----ctga--gtt--tgcat-tcagg
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Mico_argentatus.k141_1024458                                 802 31 -     20047 C-----G-------AG---ATGCCACC----TGC----TTGC--ATT--TGC-T-TCTGC
i Mico_argentatus.k141_1024458                           C 0 C 0
s Mico_humeralifer.k141_1346949                               1215 31 +      1399 C-----G-------AG---ATGCCACC----TGC----TTGC--ATT--TGC-T-TCTGC
i Mico_humeralifer.k141_1346949                          C 0 C 0
s Mico_schneideri.k141_916733                                        802 31 +      5107 C-----G-------AG---ATGCCACC----TGC----TTGC--ATT--TGC-T-TCTGC
i Mico_schneideri.k141_916733                                  C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1853719 30 +   8254450 ------t-------gg---agccacgc----tgt----ctga--at---tgcat-tctgg
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             37397 30 +     64694 ------t-------gg---agccacgc----tgt----ctga--at---tgcat-tctgg
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                          14431 31 -     28506 C-----C-------AG---AGGCCacc----tgg----ttgc--act--tgc-t-tctgc
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_55178          365 16 +     26817 ---------------------------------------tga--gtt--tgcat-tctgg
i Mirounga_angustirostris.MirAng_flattened_line_55178    I 12 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    30419 32 -    437263 c-----c-------ag---ggccagac----tgt----ctga--gtt--tgcat-tcagg
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 144431 28 -    366855 c-----t-------gg---agccaaag----t--------gg--gtt--tatat-tctgg
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   4732 17 +     82753 c-----c-------ag---ggccagac----agt----ct--------------------
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 9
s Mungos_mungo.MunMun_flattened_line_40893                     545 16 +      5729 ---------------------------------------tga--ggt--tgcat-tctgg
i Mungos_mungo.MunMun_flattened_line_40893               I 12 C 0
s Murina_feae.MurFea_scaffold_85699                          10960 30 +     14753 c-----c-------ag---agccaaac----tgt----ctg----tt--tgcat-cttgg
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84365136 28 - 120012414 C-----T-------AG---AGGC--------TAG----CACA--GTT--TATAT-TTTCC
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87654540 28 - 129401213 C-----T-------AG---AGGC--------TAG----CAGA--GTT--TATAT-TCTCC
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31359242 28 -  89631738 C-----T-------AG---AGGC--------TAG----ctga--gtt--tatag-tctcc
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90757327 28 - 130317789 C-----T-------AG---AGGC--------TAG----CAGA--GTT--TATAT-TCTCC
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              8884 31 +     14296 t-----c-------tg---ag-ccaac----tgt----ctga--gtg--tgaat-tctgt
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               304134 16 -  14710649 ---------------------------------------tga--gtt--tgcat-tctgg
i Mustela_putorius.JH418006.1                            I 6 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     73712 36 -     80779 T-----CATCCA-TAT---TGgccaac----tgt----ctaa----c--tacat-tgtca
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                284442 30 -  10118263 c-----c-------ag---agccgacc----tgt----ctg----tt--tgcat-tctgg
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1591760 30 -   6019432 c-----c-------ag---agccgacc----tgt----ctg----tt--tgcat-tctgg
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3907861 30 -   4330536 c-----c-------ag---agccgacc----tgt----ctg----tg--tgcat-tctgg
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_44643                         2417 30 +     25416 c-----c-------aa---agccgacc----tgt----ctg----tt--tgcat-tctgg
i Myotis_myotis.MyoMyo_scaffold_44643                    C 0 C 0
s Nannospalax_galili.KL204047.1                            2040084 27 -   3037898 A-----c-------ag---aagc--------tga----ctga--gtt--c-cct-tctcc
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               20496 31 +     21681 C-----C-------AG---aggccacc----tgg----ttac--gca--tgc-t-tctgc
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20310118 16 +  31847680 ---------------------------------------tga--gtt--tgcat-tctgg
i Neomonachus_schauinslandi.NINY01007730.1               I 12 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5869384 32 +   7148211 c-----c-------ag---ggccagac----tgt----ctga--gtt--tgcat-tcagg
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    760656 32 +    783361 c-----a-------gg---agccaacc----tgt----ttgg--gtt--tgcct-tctgg
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9152866 16 -   9404916 ---------------------------------------tga--gtt--tgcat-tctgg
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 12 C 0
s Nycticebus_bengalensis.LG01                            102595947 19 - 196305487 -------------------------------TGT----CTGA--ATT--TGC-A-TCAGG
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1514628                             1414 19 -      5837 -------------------------------TGT----CTGA--ATT--TGC-A-TCAGG
i Nycticebus_coucang.k141_1514628                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771869 19 + 199412804 -------------------------------TGT----CTGA--ATT--TAC-A-TCAGG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1368136 16 +   3988456 ---------------------------------------TGA--CTT--TCCAT-TCTGG
i Ochotona_princeps.JH802162.1                           I 11 C 0
s Odobenus_rosmarus.KB229312.1                              508943 16 -   2017862 ---------------------------------------tga--gtt--tgcat-tctgg
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         148108 15 +    630418 c-----c-------ag---ggcca--c----agt----ct--------------------
i Odocoileus_virginianus.KZ100018.1                      C 0 I 9
s Okapia_johnstoni.LVCL01S0005463.1                          82496 17 -    150152 c-----c-------ag---ggccagac----agt----ct--------------------
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 9
s Onychomys_torridus.OnyTor_scaffold_2986                    84411 28 +    102263 C-----T-------AG---AGGC--------TGG----CTGA--GCT--TACAT-GTTCC
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2785275 32 -  10937097 c-----c-------ag---ggccagac----tgt----ctga--gtt--tgcat-tcagg
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       466293 16 -    559221 ---------------------------------------tga--gtt--tgcat-tctgg
i Otocyon_megalotis.JAEUCK010005147.1                    I 12 C 0
s Otolemur_crassicaudatus.k141_222918                         7202 19 +      8798 -------------------------------TGT----CTGA--ATT--TGC-A-TCACG
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             699441 19 -   1103335 -------------------------------TGT----CTGA--ATT--TGC-A-TCATG
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   17590944 17 +  44047080 c-----c-------ag---ggctagac----agt----ct--------------------
i Ovis_aries.CM001607.2                                  C 0 I 9
s Ovis_canadensis.OviCan_scaffold_2572                      179095 17 -    191736 c-----c-------ag---ggctacac----agt----ct--------------------
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 I 9
s Pan_paniscus.KQ411613.1                                    48737 31 +     80009 C-----C-------AG---AGGACACC----TGG----TTGC--GCT--TGC-g-tctgc
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03002948.1                             24663 34 +     28717 C-----C-------AG---AGGACACC---CTGG----TTGCCGGCT--TGC-g-tctgc
i Pan_troglodytes.NBAG03002948.1                         C 0 I 14
s Panthera_onca.PanOnc_flattened_line_3271                  154362 16 +    230217 ---------------------------------------tga--aat--tgcag-tcttc
i Panthera_onca.PanOnc_flattened_line_3271               I 12 C 0
s Panthera_pardus.KV860321.1                                267678 16 +  18783137 ---------------------------------------tga--aat--tgcag-ttttc
i Panthera_pardus.KV860321.1                             I 12 C 0
s Panthera_tigris.KE722367.1                               4724498 16 -   8748460 ---------------------------------------tga--gat--tgcag-ttttc
i Panthera_tigris.KE722367.1                             I 12 C 0
s Pantholops_hodgsonii.KE114653.1                          1269825 17 -   2937107 c-----c-------ag---ggctagac----agt----ct--------------------
i Pantholops_hodgsonii.KE114653.1                        C 0 I 9
s Papio_anubis.CM001495.2                                183448672 31 + 183742232 C-----C-------AG---AGGCCACC----TGG----TTGC--GCT--TGc-t-tctgc
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            12203 31 +     20448 c-----c-------ag---aggccacc----tgg----ttgc--gct--tgc-t-tctgc
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20569014 31 +  20919399 c-----c-------ag---aggccacc----tgg----ttgc--gct--tgc-t-tctgc
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                  10960 31 +     41871 c-----c-------ag---aggccacc----tgg----ttgc--gct--tgc-t-tctgc
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    14238 31 +     27711 c-----c-------ag---aggccacc----tgg----ttgc--gct--tgc-t-tctgc
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  5237 31 -     11374 c-----c-------ag---aggccacc----tgg----ttgc--gct--tgc-t-tctgc
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15775  4 -     78924 --------------------------------------------------------ctgg
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1182643                            219 19 -      3244 -------------------------------TGT----CTGA--ATT--TCC-A-TCAAG
i Perodicticus_ibeanus.k141_1182643                      C 0 C 0
s Perodicticus_potto.k141_1186926                              597 19 +     10374 -------------------------------TGT----CTGA--ATT--TCC-A-TCAAG
i Perodicticus_potto.k141_1186926                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18215161 28 -  18517816 C-----T-------AG---AGGC--------TGG----CTGA--GTT--TACAT-TCTCC
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_221660                     1149 38 -      2102 C-----CATTTG-CAG---TGGCCATC----TGT----ctga--gtt--tatat-tctgg
i Petromus_typicus.PetTyp_scaffold_221660                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              12346 32 +     63832 c-----c-------ag---ggccagac----tgt----ctga--gtt--tgcat-tcagg
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            3600 31 +     68526 c-----c-------ag---aggccacc----tgg----ttgt--gct--tgc-t-tctgc
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        43737 31 +     89929 c-----t-------ag---aggccacc----tgg----ttgc--gct--tgc-t-tctgc
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            45153 31 +     51399 c-----t-------ag---aggccacc----tgg----ttgc--gct--tgc-t-tctgc
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14301389 31 -  14605196 C-----C-------AG---AGGCCACC----TGG----TTGC--GCT--TGC-T-TCTGC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             5741 25 +     22620 c-----c-------ag---agccaaac----tgt----ctg----tt--tgcat------
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 12
s Platanista_gangetica.PlaMin_flattened_line_173610           1898 16 +      7680 ---------------------------------------tga--gtt--tgcat-tcagg
i Platanista_gangetica.PlaMin_flattened_line_173610      I 12 C 0
s Pithecia_albicans.k141_1476471                              7130 15 +     26961 c-----g-------ag---aggcctcc----tgg--------------------------
i Pithecia_albicans.k141_1476471                         C 0 I 10
s Pithecia_chrysocephala.k141_839575                          3257 15 +     23417 c-----g-------ag---aggcctcc----tgg--------------------------
i Pithecia_chrysocephala.k141_839575                     C 0 I 10
s Pithecia_hirsuta.k141_305604                                7122 15 +     29694 C-----G-------AG---AGGCCTCC----TGG--------------------------
i Pithecia_hirsuta.k141_305604                           C 0 I 10
s Pithecia_mittermeieri.k141_446740                          32148 15 +     52772 c-----g-------ag---aggcctcc----tgg--------------------------
i Pithecia_mittermeieri.k141_446740                      C 0 I 10
s Pithecia_pissinattii.k141_1824269                           7144 15 +     26198 c-----g-------ag---aggcctcc----tgg--------------------------
i Pithecia_pissinattii.k141_1824269                      C 0 I 10
s Pithecia_pithecia.tarseq_165                             3943674 15 +   4542175 c-----g-------ag---aggcctcc----tgg--------------------------
i Pithecia_pithecia.tarseq_165                           C 0 I 10
s Pithecia_vanzolinii.k141_1697688                            7108 15 -     23490 c-----g-------ag---aggcctcc----tgg--------------------------
i Pithecia_vanzolinii.k141_1697688                       C 0 I 10
s Plecturocebus_bernhardi.k141_2549090                       11369 15 -     39866 C-----G-------AG---AGGCCTCC----TGG--------------------------
i Plecturocebus_bernhardi.k141_2549090                   C 0 I 16
s Plecturocebus_brunneus.k141_1495506                        20532 15 +     34906 C-----G-------AG---AGGCCTCC----TGG--------------------------
i Plecturocebus_brunneus.k141_1495506                    C 0 I 16
s Plecturocebus_caligatus.k141_1382851                       24794 15 +     87950 c-----g-------ag---aggcctcc----tgg--------------------------
i Plecturocebus_caligatus.k141_1382851                   C 0 I 16
s Plecturocebus_cinerascens.k141_1164729                     25621 15 +     88961 c-----g-------ag---aggcctcc----tgg--------------------------
i Plecturocebus_cinerascens.k141_1164729                 C 0 I 16
s Plecturocebus_cupreus.k141_2351393                         11291 15 +     39403 C-----G-------AG---AGGCCTCC----TGG--------------------------
i Plecturocebus_cupreus.k141_2351393                     C 0 I 16
s Plecturocebus_dubius.k141_1058799                          25074 15 -     87928 c-----g-------ag---aggcctcc----tgg--------------------------
i Plecturocebus_dubius.k141_1058799                      C 0 I 16
s Plecturocebus_grovesi.k141_2013005                         32036 15 +     60166 C-----G-------AG---AGGCCTCC----TGG--------------------------
i Plecturocebus_grovesi.k141_2013005                     C 0 I 16
s Plecturocebus_hoffmannsi.k141_3303950                      32232 15 +     67232 c-----g-------ag---aggcctcc----tgg--------------------------
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 I 16
s Plecturocebus_miltoni.k141_349282                          27705 15 +     90634 c-----g-------ag---aggcctcc----tgg--------------------------
i Plecturocebus_miltoni.k141_349282                      C 0 I 16
s Plecturocebus_moloch.k141_1031110                          25078 15 -     89403 c-----g-------ag---aggcctcc----tgg--------------------------
i Plecturocebus_moloch.k141_1031110                      C 0 I 16
s Pongo_abelii.CM009266.2                                189136525 31 + 189387572 C-----C-------AG---AGGACACC----TGG----TTGT--GCT--TGC-G-TCTGC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9576135 31 +   9816681 C-----C-------AG---aggacacc----tgg----ttgt--gct--tgc-g-tctgc
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               78677 31 -     81375 c-----c-------ag---aggccacc----tgg----ttac--gca--tgc-t-tctgc
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                             10513 31 +     19060 c-----c-------ag---aggccacc----tgg----ttac--gca--tgc-t-tctgc
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            15167 28 -     21651 c-----t-------ag---aagc--------tgg----ctga--gtt--tccat-tcccc
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            17978 32 -     21811 c-----c-------gg---agctaaac----t--ctcc--ga--gtt--tgcat-tcggg
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_76658           992 16 -      3818 ---------------------------------------tga--gtt--tgcat-tctgg
i Pteronura_brasiliensis.PteBra_flattened_line_76658     I 6 C 0
s Pteropus_alecto.KB030862.1                              22987375 32 +  28871421 c-----c-------gg---agccaaac----tgt----ctga--gtt--tgcat-tctgg
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1370935 32 +   4952924 c-----c-------gg---agccaaac----tgt----ctga--gtt--tgcat-tctgg
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20277568 16 -  38429054 ---------------------------------------tga--gac--tgcag-ttttc
i Puma_concolor.QAVW01001104.1                           I 12 C 0
s Pygathrix_cinerea.k141_1153803                             20490 31 -     91421 c-----c-------ag---aggccacc----tgg----tttc--gcg--tgc-t-tctgc
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7614615 31 +   7812017 C-----C-------AG---aggccacc----tgg----tttc--gcg--tgc-t-tctgc
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             20520 31 -     72585 c-----c-------ag---aggccacc----tgg----tttc--gca--tgc-t-tctgc
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  9946 15 +     55207 c-----c-------ag---ggcca--c----agt----ct--------------------
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 9
s Rattus_norvegicus.chr16                                 53574569 28 +  90668790 C-----G-------AG---AGGC--------GAG----CTGA--GTT--TATAT-TCCCC
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        370134 32 -   3329780 c-----c-------ag---acaccatc----tgt----ctga--gtt--tgcat-tctgg
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_1041714                            1083 31 +      5697 C-----C-------AG---aggccacc----tgg----ttac--gca--tgc-t-tctgc
i Rhinopithecus_bieti.k119_1041714                       C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91241556 31 - 195417433 C-----C-------AG---AGGCCACC----TGG----TTAC--GCA--TGC-T-TCTGC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7677205 31 +   7961872 c-----c-------ag---aggccacc----tgg----ttac--gca--tgc-t-tctgc
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_301684                 207 32 +       280 C-----C-------AG---AGTCAAAC----TGT----CAGA--GTT--TGCAT-TCTGA
i Rousettus_aegyptiacus.RouAeg_scaffold_301684           C 0 C 0
s Saguinus_bicolor.k141_8081                                  2851 31 +     42994 T-----G-------AG---AGGCCACC----TGG----TTGC--ATT--TGC-T-TCTGC
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                             1525 31 +      2253 T-----G-------AG---AGGCCACC----TGG----TTGC--ATT--TGC-T-TCTGC
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               1974 31 -      8737 T-----G-------AG---AGGCCACC----TGG----TTGC--ATT--TGC-T-TCTGC
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                              1606 31 +      2343 T-----G-------AG---AGGCCACC----TGG----TTGC--ATT--TGC-T-TCTGC
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209476508 31 + 209938924 t-----g-------ag---aggccacc----tgg----ttgc--att--tgc-t-tctgc
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                 933 31 -      7576 T-----G-------AG---AGGCCACC----TGG----TTGC--ATT--TGC-T-TCTGC
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_133311                       2402 17 +      9503 c-----c-------ag---ggccagac----agt----ct--------------------
i Saiga_tatarica.SaiTat_scaffold_133311                  C 0 I 9
s Saimiri_boliviensis.NW_024100920.1                     119952576 31 - 121099817 C-----G-------AG---AGGCCACC----TGG----TTGC--ATT--TGC-T-TCTGC
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24918 31 +     46362 C-----G-------AG---AGGCCACC----TGG----TTGC--ATT--TGC-T-TCTGC
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               25013 31 +     45824 C-----G-------AG---AGGCCACC----TGG----TTGC--ATT--TGC-T-TCTGC
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             41691 31 -     64574 C-----G-------AG---AGGCCACC----TGG----TTGC--ATT--TGC-T-TCTGC
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4765 31 -     23631 C-----G-------AG---AGGCCACC----TGG----TTGC--ATT--TGC-T-TCTGC
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 24909 31 -     61129 C-----G-------AG---AGGCCACC----TGG----TTGC--ATT--TGC-T-TCTGC
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5422241 31 -   5703754 C-----G-------AG---AGACCACC----TGG----TTGC--ATT--TGC-T-TCTGC
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          57482 31 -     80660 C-----G-------AG---AGACCACC----TGG----TTGC--ATT--TGC-T-TCTGC
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Semnopithecus_entellus.k141_1672505                         5349 31 -     12572 C-----C-------AG---aggccacc----tgg----ttac--gca--tgc-t-tctgc
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      32202 31 +     39453 C-----C-------AG---aggccacc----tgg----ttac--gca--tgc-t-tctgc
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           12706 31 +     27826 C-----C-------AG---aggccacc----tgg----ttac--gca--tgc-t-tctgc
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            12252 31 -     19483 C-----C-------AG---aggccacc----tgg----ttat--gca--tgc-t-tctgc
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      5548 31 -     12762 C-----C-------AG---aggccacc----tgg----ttac--gca--tgc-t-tctgc
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           5391 31 +     13763 C-----C-------AG---aggccacc----tgg----ttac--gca--tgc-t-tctgc
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     4374 28 -     30804 C-----T-------AG---AGGC--------TGG----CCGA--GCT--AACAT-TATCC
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               5070 32 +   1910179 c-----c-------ag---agccagat----tgc----ctga--gct--tacat-tcaag
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1957293 32 -   3870691 c-----c-------gg---aggtcaac----tgt----ctga--gtt--tgtag-tctag
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             33247 16 +     97271 ---------------------------------------tga--gtc--tgcat-tctgg
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 6 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              21812 16 -    196729 ---------------------------------------tga--agt--tgcat-tctgg
i Suricata_suricatta.SurSur_flattened_line_6629          I 12 C 0
s Sus_scrofa.CM000828.4                                    6814895 32 +  69701581 c-----c-------ag---agccagac----tgt----atga--gtt--tgcat-tctgg
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                14497 32 +     41958 c-----t-------gg---agccaaac----tgt----ctga--gtt--tgcat-tctgc
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      122152 32 -    156842 c-----c-------ag---acccagac----tgt----ctga--gtt--tgcat-tctgg
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    390633 32 +    539355 c-----c-------ag---agccagac----tgt----ctga--gtt--tgcat-tctgg
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_wallacei.k141_254427                                4059 13 -     16117 -----------------------------------------C--AGT--CGC-T-GCTGG
i Tarsius_wallacei.k141_254427                           I 12 C 0
s Tarsius_lariang.k141_2201908                               29251 12 +     70052 C-----C-------TG---AGACCAGC---------------------------------
i Tarsius_lariang.k141_2201908                           C 0 I 13
s Theropithecus_gelada.CM009954.1                        186433865 31 + 186847797 C-----C-------AG---AGGCCACC----TGG----TTGT--GCT--TGC-T-TCTGC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              107977 38 +    114563 T-----CATCTA-CAG---TGgccaac----tgt----ctga--gtt--tacat-tctgg
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_85600                    5656 32 +     18632 c-----c-------aa---aactcgct----tgt----ctga--ggt--cacaa-tctgg
i Tolypeutes_matacus.TolMat_scaffold_85600               C 0 C 0
s Trachypithecus_auratus.k141_722599                         16288 31 -     20410 C-----C-------AG---aggccacc----tgg----ttac--gca--tgc-t-tctgc
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      5408 31 -     12674 C-----C-------AG---aggccacc----tgg----ttac--gca--tgc-t-tctgc
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       16396 31 +     19930 C-----C-------AG---aggccacc----tgg----ttac--gca--tgc-t-tctgc
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      12796 31 -     19997 C-----C-------AG---aggccacc----tgg----ttac--gca--tgc-t-tctgc
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            52939 31 -     60166 C-----C-------AG---aggccacc----tgg----ttac--gca--tgc-t-tctgc
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        20402 31 -     27529 C-----C-------AG---aggccacc----tgg----ttac--gca--tgc-t-tctgc
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                       2030 31 +      9229 C-----C-------AG---aggccacc----tgg----ttac--gca--tgc-t-tctgc
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          13929 31 -     21137 C-----C-------AG---aggccacc----tgg----ttac--gca--tgc-t-tctgc
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                    2034 31 +      9131 C-----C-------AG---aggccacc----tgg----ttac--gca--tgc-t-tctgc
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                         1993 31 -      3730 C-----C-------AG---aggccacc----tgg----ttac--gca--tgc-t-tctgc
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        30262 31 +     32220 C-----C-------AG---aggccacc----tgg----ttac--gca--tgc-t-tctgc
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5944360 31 +   6242583 C-----C-------AG---aggccacc----tgg----ttac--gca--tgc-t-tctgc
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       13617 31 +     20839 C-----C-------AG---aggccacc----tgg----ttac--gca--tgc-t-tctgc
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    3825 19 +     27266 c-----c-------ag---ggctggactg--agt----tc--------------------
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 I 9
s Tupaia_chinensis.KB320699.1                              2166405 14 +   4065304 C-----C-------AG---AG-CTGAC----TGc--------------------------
i Tupaia_chinensis.KB320699.1                            C 0 I 4
s Tupaia_tana.TupTan_flattened_line_394                       2774 14 +     70247 C-----C-------AG---AG-CTGAC----CGc--------------------------
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 4
s Tursiops_truncatus.MRVK01000835.1                       15741527 32 +  33153633 c-----c-------ag---ggccagac----tgt----ctga--gtt--tgcat-tcagg
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   57627 32 -     77625 c-----a-------aa---agtcaggt----tgc----ctaa--ctt--tgcat-tcaaa
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4852902 16 -   5085361 ---------------------------------------tga--gct--tgcat-tctgg
i Ursus_maritimus.KK499267.1                             I 12 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 14407 16 -     43706 ---------------------------------------tga--gtt--tgcat-tctgg
i Vulpes_lagopus.VulLag_flattened_line_30954             I 12 C 0
s Xerus_inauris.XerIna_scaffold_2302                          4328 32 +    224448 c-----c-------gg---aggtcaag----tgg----ctaa--gtt--tacat-tctgg
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      17658 17 +     63895 --------------------------------------CTGA--GTT--GACAT-TCTCT
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 7 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_1424488            163 32 -       542 c-----c-------ag---ggccagac----tgt----ctga--gtt--tgcat-tcagg
i Ziphius_cavirostris.ZipCav_flattened_line_1424488      C 0 I 14
e Cheracebus_torquatus.k141_1170026                          64344 81 +     76511 I
e Cheracebus_regulus.k141_471822                            159875 81 -    216457 I
e Cheracebus_lugens.k141_1393925                              2308 81 +     17877 I
e Cheracebus_lucifer.k141_49986                               2432 81 -     17098 I
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vicugna_pacos.KN270157.1                                 5374276 47 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tonatia_saurophila.TonSau_scaffold_294                     83346 714 +    610378 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Sorex_araneus.JH798187.1                                13653314 9235 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    156307 109 -    313613 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                       107181400  0 - 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Ondatra_zibethicus.OndZib_scaffold_7387                      632 3336 +    140218 I
e Octodon_degus.JH651603.1                                  750513 17 +  11899542 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                18000 920 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184766 1004 -  29670104 I
e Manis_pentadactyla.KN006162.1                              54034 31 -    317179 I
e Manis_javanica.JSZB01003497.1                              21892 31 +    737560 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     5119  0 +     14121 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20664195 469 +  22651954 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    39057 4687 +     67921 I
e Desmodus_rotundus.KZ672289.1                             8632254 708 +  20541912 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    839213  0 +   1526836 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1255607 4808 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Carollia_perspicillata.CarPer_scaffold_92756                7250 707 -     11696 I
e Camelus_ferus.KB017975.1                                  405530 47 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2337232 47 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10004760 47 -  17673402 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6909 705 +     43469 I
e Anoura_caudifer.AnoCau_scaffold_1412                      187499 706 +    412891 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      11420 13 +     62944 TGCTGCCAC--T-GCT
s Acinonyx_jubatus.LLWD01001279.1                           835192 13 -   1699592 ctcttccgc-gt--ct
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     74650  2 +     87051 --------------CT
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 1 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9513139 14 -  29979442 ctttgccacc-t-tct
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             82044 14 -    347723 ttctgctac-at-tgc
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     76202  9 -     89534 TTCTGCCAA-------
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 13
s Allenopithecus_nigroviridis.k141_3361533                   20017 13 -     52922 tgctgctac--c-gct
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         19948 13 -     28001 tgctgccac--c-gct
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                         10435 13 -     18505 tgctgccac--c-gct
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                          11300 13 -     12518 tgctgccac--c-gct
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             11639 13 +     51355 tgctcccac--c-gct
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                4750 13 -     36483 tgctcccac--c-gct
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              15202 13 +     28687 tgctcccac--c-gct
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 3675 13 +     27940 tgctcccac--c-gct
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            4763 13 -      9457 tgctcccac--c-act
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             3721 13 +     30492 tgctcccac--c-gct
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              7942 13 +     47717 tgctcccac--c-gct
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              4443 13 +      5663 tgctcccac--c-gct
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             18894 13 +     50774 tgctcccac--c-gct
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          680852 14 -   2318259 ttctgctgcc-t-tcc
i Ammotragus_lervia.NIVO01071767.1                       I 9 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303              2122 14 -     32520 ttctgctgcc-t-tct
i Antilocapra_americana.AntAmePen_scaffold_43303         I 9 C 0
s Aotus_azarae.k141_3104676                                  17435 13 -     33861 tgctctcac--c-act
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            17433 13 -     34016 TGCTCTCAC--C-ACT
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299860 13 -   5030052 TGCTCTCAC--C-ACT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             17469 13 -     34685 TGCTCTCAC--C-ACT
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               30593 13 -     47192 tgctctcac--c-act
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      15878 14 +     20879 TTCAGTCAC-CT-TCT
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_1648548                         557 14 +      5281 TTCTAGCAC-CT-TCT
i Arctocebus_calabarensis.k141_1648548                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21212121 13 -  21539123 tgctcccac--c-gct
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               46920 13 -     48001 tgctcccac--c-gct
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 29721 13 -     30947 tgctcccac--c-gct
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               11496 13 -     89868 tgctcccac--c-gct
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              15878 13 -     40414 tgctcccac--c-gct
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                23766 13 +     72325 tgctcccac--c-gct
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15195192 14 +  23207421 ttctgctgcc-t-tct
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         5657 14 -     18090 ttctgctgcc-t-tct
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    31932 14 +     34529 ttctgctgcc-t-tcc
i Beatragus_hunteri.BeaHun_scaffold_50177                I 9 C 0
s Bison_bison.KN261452.1                                    204567 14 -    288883 ttctgctgcc-t-tcc
i Bison_bison.KN261452.1                                 I 9 C 0
s Bos_indicus.CM003047.1                                  20277804 14 +  48749331 ttctgctgcc-t-tcc
i Bos_indicus.CM003047.1                                 I 9 C 0
s Bos_mutus.JH880303.1                                     1130358 14 -   1948126 ttctgctgcc-t-tcc
i Bos_mutus.JH880303.1                                   I 9 C 0
s Bos_taurus.CM000203.6                                   18088442 14 +  45695690 ttctgctgcc-t-tcc
i Bos_taurus.CM000203.6                                  I 9 C 0
s Bubalus_bubalis.KI419123.1                               2824394 14 +   4408762 ttctgctgtc-t-tcc
i Bubalus_bubalis.KI419123.1                             I 9 C 0
s Cacajao_ayresi.k141_552049                                104755 13 -    122966 tgctcccac--c-act
i Cacajao_ayresi.k141_552049                             I 10 C 0
s Cacajao_calvus.k141_5142                                   64258 13 +     81800 tgctcccac--c-act
i Cacajao_calvus.k141_5142                               I 10 C 0
s Cacajao_hosomi.k141_81245                                  33440 13 -     95584 tgctcccac--c-act
i Cacajao_hosomi.k141_81245                              I 10 C 0
s Cacajao_melanocephalus.k141_619699                         57540 13 -    119600 tgctcccac--c-act
i Cacajao_melanocephalus.k141_619699                     I 10 C 0
s Callibella_humilis.k141_10318                               1197 13 +     27907 TGCTCCCAC--C-ATG
i Callibella_humilis.k141_10318                          C 0 C 0
s Callimico_goeldii.k141_737284                                838 13 -     31217 TGCTCCCAC--C-ACG
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                             1133 13 +      5377 tgctcccac--c-atg
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23592994 13 - 189096842 TGCTCCCAC--C-ACG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1808 13 -     12329 TGCTCCCAC--C-ATG
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s CanFam4.chr16                                           17802808 14 -  60362399 ttcggccacc-t-tgt
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     3554 14 -     43241 ttcggccacc-t-tgt
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9038249 14 -   9314153 ttcggccacc-t-tgt
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17962725 14 -  59632846 ttcggccacc-t-tgt
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18504022 14 +  63665305 ttcggccacc-t-tgt
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18834877 14 +  46296322 ttctgctgcc-t-tcc
i Capra_aegagrus.CM003241.1                              I 9 C 0
s Capra_hircus.CM004588.1                                 18065678 14 -  44709034 ttctgctgcc-t-tcc
i Capra_hircus.CM004588.1                                I 9 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    3568 14 -     12242 ttctatccgc-t-tct
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           158778 14 -    496798 TGCTGCCAC--CTTCT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    140313 14 +    179628 ctctgcctcc-t-tct
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     97331 14 +    217609 ttctgctgcc-t-tct
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18352150 13 -  23392119 ttctgccacc-t--gt
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18364410 13 -  23407841 ttctgccacc-t--gt
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                       103292 13 +    143979 ttctgccacc-t--gt
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cebuella_pygmaea.k141_793006                                 834 13 -     15088 TGCTCCCAC--C-ACA
i Cebuella_pygmaea.k141_793006                           C 0 C 0
s Cebus_albifrons.Contig27                                25654314 13 +  26074798 TGCTCCCAC--C-ACT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                2252 13 +     28840 TGCTCCCAC--C-ACT
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 1981 13 +     14051 TGCTCCCAC--C-ACT
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         8582 14 +     31688 tgctgccac--cttct
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12234870 14 +  27778364 gtctgccacc-t-tct
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5893 14 -     25243 gtctgccacc-t-tct
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4480965 13 +   4669795 TGCTGCCAC--C-GCT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        5466 13 +     17872 tgctgccac--c-gct
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           6054 13 -     14043 tgctgccac--c-gct
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          14153 13 +     27781 tgctgccac--c-gct
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        14313 13 -     20310 cgctgccac--c-gct
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          17286 13 +     29689 tgctgccac--c-gct
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           12045 13 -     20078 tgctgccac--c-gct
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          19959 13 -     27936 tgctgccac--c-gct
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            8832 13 -     17152 tgctgccac--c-gct
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38828559 13 +  39242232 tgctgccac--c-gct
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21228064 13 -  21565898 tgctgccac--c-gct
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       45176 13 -     53127 tgctgccac--c-gct
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        5437 13 +     13442 cgctgccac--c-gct
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       19979 13 -     27947 tgctgccac--c-gct
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         3007 13 +     10558 tgctgccac--c-gct
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          6010 13 +     14005 tgctgccac--c-gct
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            7586 14 -      8501 ttctgccacc-t-cgt
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Chiropotes_albinasus.k141_2206961                           2617 12 -     15524 TGCTCCC-C--C-CCT
i Chiropotes_albinasus.k141_2206961                      I 16 C 0
s Chiropotes_israelita.k141_747660                          101883 13 +    146308 tgctcccac--c-act
i Chiropotes_israelita.k141_747660                       I 10 C 0
s Chiropotes_sagulatus.k141_1421488                          33690 13 -     50570 tgctcccac--c-act
i Chiropotes_sagulatus.k141_1421488                      I 10 C 0
s Chlorocebus_aethiops.ctg25                              18433882 13 -  18827391 tgctgccac--c-gcc
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       20378 13 -     50209 tgctgccac--c-gcc
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135427384 13 + 135778131 tgctgccac--C-GCT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1915920 13 +   2368649 TGCTGCCGC--C-GCT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199954161 13 + 200372422 TGctgccgc--c-gct
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              42470 13 +     84244 TGCTGCCGC--C-GCT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17552835 14 -  53390261 ttctgctacc-t-tcc
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           4057 14 +     23735 ttctgctacc-t-ttt
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 54106 14 +     63868 -tctgccaacct-tct
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11669629 14 + 224834208 -tctgccaccct-tct
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               6897 13 -     19598 ACCA-CCAT-CT-TCT
i Crocidura_indochinensis.CroInd_scaffold_37019          I 661 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             31743 13 -     87169 ctcttcagcc-t--ct
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  38493 14 +     51376 ttctaccagc-t-tct
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900             3116 14 -     75252 ttctgccacc-t-tct
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            70589 14 +   2246927 ttctgccacc-t-tct
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16815067 14 +  35494412 ttctgctgcc-c-tct
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  676712 14 +   1390856 ttctgccacc-t-tct
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    9472 14 +    198055 gtctgccacc-t-tct
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 35843 14 -     42551 tcctgccacc-t-tct
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE797349.1                                    960 14 -     31197 ttccactacc-t-tcc
i Eidolon_helvum.KE797349.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       315334 14 +    607251 ttctgctgcc-t-tcc
i Elaphurus_davidianus.JRFZ01104969.1                    I 9 C 0
s Ellobius_lutescens.LOEQ01008920.1                          24987 14 -    110024 -TCTGGCACCCT-TCT
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                            4916 14 +      8657 -tctggcaccct-tct
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16339075 14 -  41312741 ttctgctac-ac-tgt
i Enhydra_lutris.KZ291758.1                              C 0 I 186
s Eptesicus_fuscus.JH977646.1                              2150986  7 -  14770903 -------agc-t-tct
i Eptesicus_fuscus.JH977646.1                            C 0 I 13
s Equus_asinus.JREZ01000139.1                              1287006 14 +   4378816 ttctgccacc-t-tct
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18534814 14 -  39960074 ttctgccacc-t-tct
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               36843 14 +    498745 ttctgccacc-t-tct
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21210554 13 -  21539334 TGCTGCCAC--C-GCT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           14490 14 +    133382 ttctgctgcc-t-tct
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             28439 14 -     44125 ttctgctgcc-t-tct
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20240324 13 + 206538554 ctcttccgcc-t--ct
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20199196 13 + 205367284 ctcttccgcc-t--ct
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 12856 13 -     36744 ctcttccgcc-t--ct
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             852924 14 +   3816255 ttctgccacc-t-gct
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg2040                                     429729 14 -    453645 TTCTAGCAC-CT-TCT
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             7419 14 +     11339 TTCTAGCAC-CT-TCT
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            4708 14 +     41679 TTCTAGCAC-CT-TCT
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               5951 14 -      9135 ttctaccacc-t-tct
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     612576 14 -    660261 ttctgctgcc-t-tcc
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 9 C 0
s Glis_glis.GliGli_scaffold_19807                            35667 14 +     49224 ttctgccac-tt-ttt
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              20646 13 -     32273 tgctgctac--t-gct
i Gorilla_beringei.k141_3596273                          C 0 I 33
s Gorilla_gorilla.LT578341.1                             186342781 13 + 186649187 tgctgctac--t-gct
i Gorilla_gorilla.LT578341.1                             C 0 I 33
s Graphiurus_murinus.GraMur_scaffold_10447                   37290 14 +     78134 ttctgtcac-tt-tct
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               245554 13 +    327341 ctcttcagcc-t--ct
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 23171 14 +     36099 ttctgctgcc-t-tcc
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 9 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               113922 14 +    128679 ttctgctgc-tt-tct
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       113716 14 +   1711038 ttcttccacc-t-ttt
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188               2282 14 +      9903 ttcttctacc-t-ttt
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 C 0
s Hoolock_leuconedys.ctg274                                    440232 13 +    630532 tgctgccac--g-gtt
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  48524 13 +     55795 ctcttcagcc-t--ct
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 2
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            27237 14 -    143317 ttctgccacc-t-tcc
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      85395 14 +    135385 ctctgccacc-t-tct
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7525441 14 -   7955117 ttctgcaacc-t-tct
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 5
s Inia_geoffrensis.IniGeo_flattened_line_34779                2274 14 -     31341 ttctgctgcc-c-tct
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8278952 15 -   9596543 TTCTGCCAACCT-TCT
i Jaculus_jaculus.JH725527.1                             C 0 I 8
s Kogia_breviceps.KogBre_flattened_line_81059                 2013 14 -     18011 ttctgctgcc-t-tct
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         17939 13 -     38430 TGCTCCCAC--C-Gct
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_50988                    19256 14 +     29960 ttctgctacc-c-tcc
i Lasiurus_borealis.LasBor_scaffold_50988                I 128 C 0
s Leontocebus_fuscicollis.k141_1820339                        9572 13 +     64341 tgctcccac--c-cct
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           1914 13 -     35062 TGCTCCCAC--C-CCT
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        9601 13 +     35603 TGCTCCCAT--C-CCT
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    31217 13 +     38576 tgctcccac--c-acg
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         27921 13 +     66356 tgctcccac--c-acg
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3059194 14 +   3914936 ttctgccac-at-tgt
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             271545 14 -    662738 ttctgctgcc-c-tct
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1442514 13 +   1826925 tgctgccac--c-gct
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_399337                            17753 14 -     33856 TTCTAGCAC-CT-TCT
i Loris_lydekkerianus.k141_399337                        C 0 C 0
s Loris_tardigradus.ctg83                                  1015464 14 +   6120653 TTCTAGCAC-CT-TCT
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17958965 14 -  59628241 ttcggccacc-t-tgt
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                              12325 13 +     40492 tgctgccac--c-gct
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59681575 13 +  60120075 tgctgccac--c-gct
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 18121 13 -     26193 tgctgccac--c-gct
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            85896 13 -    114318 tgctgccac--c-gct
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 11587 13 -     23192 tgctgccac--c-gct
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                21052 13 -     29190 tgctgccac--c-gct
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  29631 13 +     37952 tgctgccac--c-gct
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186844704 13 + 187317192 TGCTGCCAC--C-GCT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25463285 13 -  25927173 TGCTGCCAC--C-GCT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  85489 13 +     89720 tgctgccac--c-gct
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                12501 13 +     20474 tgctgccac--c-gct
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  12275 13 -     14993 tgctgccac--c-gct
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  335138 13 -    668171 tgctgccac--c-gct
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                10565 13 -     24072 tgctgccac--c-gct
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               31196 13 -     45290 tgctgccac--c-gct
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                  6002 14 +    270270 ttccgctacc-t-tcc
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23942787 13 -  24302211 TGctgccac--c-gct
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356895 13 +    752769 tgctgccac--c-gct
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33106524 14 -  40650429 ttctgcaacc-t-tct
i Marmota_marmota.CZRN01000018.1                         C 0 I 5
s Megaderma_lyra.MegLyr_scaffold_4542                        16570 14 -    207569 ttctgctcc-tt-cct
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             12839 14 +     13704 ttctgctac-at-tgt
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 37572  8 +    140813 -tctgtcac-------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 5
s Mesoplodon_bidens.MesBid_scaffold_108144                    6706 14 +     10310 ttctgctgcc-c-tct
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Mico_argentatus.k141_1024458                                 833 13 -     20047 TGCTCCCAC--C-ATG
i Mico_argentatus.k141_1024458                           C 0 C 0
s Mico_humeralifer.k141_1346949                               1246 13 +      1399 TGCTCCCAC--C-ACG
i Mico_humeralifer.k141_1346949                          C 0 C 0
s Mico_schneideri.k141_916733                                        833 13 +      5107 TGCTCCCAC--C-ATG
i Mico_schneideri.k141_916733                                  C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1853749 14 +   8254450 ttctgcgacc-t-tct
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             37427 14 +     64694 ttctgcgacc-t-tct
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                          14462 13 -     28506 tgctgccac--c-gct
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_55178          381 14 +     26817 ttctgccac-at-tgt
i Mirounga_angustirostris.MirAng_flattened_line_55178    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    30451 14 -    437263 ttctgctgcc-c-tct
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 144459 14 -    366855 ttctgttacc-t-tct
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   4758 14 +     82753 ttctgctgcc-t-tcc
i Moschus_moschiferus.MosMos_scaffold_13123              I 9 C 0
s Mungos_mungo.MunMun_flattened_line_40893                     561 13 +      5729 ctcttcagcc-t--ct
i Mungos_mungo.MunMun_flattened_line_40893               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                          10990 14 +     14753 ttctgctacc-t-tct
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84365164  8 - 120012414 -TCTGCTAC-------
i Mus_caroli.LT608237.1                                  C 0 I 6
s Mus_musculus.chr8                                       87654568  8 - 129401213 -TCGTCTAC-------
i Mus_musculus.chr8                                      C 0 I 6
s Mus_pahari.LT608297.1                                   31359270  8 -  89631738 -tctgccac-------
i Mus_pahari.LT608297.1                                  C 0 I 6
s Mus_spretus.CM004101.1                                  90757355  8 - 130317789 -TCAGCTAC-------
i Mus_spretus.CM004101.1                                 C 0 I 6
s Muscardinus_avellanarius.MusAve_scaffold_82313              8915 14 +     14296 ttcagccac-tt-tct
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               304150 14 -  14710649 ttctgctac-at-tgt
i Mustela_putorius.JH418006.1                            C 0 I 187
s Myocastor_coypus.MyoCoy_scaffold_10123                     73748 14 -     80779 ttctatcagc-t-tct
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                284472 14 -  10118263 ttctgctctc-t-tct
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1591790 14 -   6019432 ttctgctaac-t-tct
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3907891 14 -   4330536 ttctgctctc-t-tct
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_44643                         2447 14 +     25416 ttctgctatc-t-tct
i Myotis_myotis.MyoMyo_scaffold_44643                    C 0 C 0
s Nannospalax_galili.KL204047.1                            2040111 14 -   3037898 -tctgccaccct-tct
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               20527 13 +     21681 tgctgccac--c-gct
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20310134 14 +  31847680 ttctgccac-at-tgt
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5869416 14 +   7148211 ttctgctgcc-c-tct
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    760688 14 +    783361 ttcccttacc-t-tcc
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9152882 14 -   9404916 ttcggccacc-t-tgt
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102595966 14 - 196305487 TTCTAGCAC-CT-TCT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1514628                             1433 14 -      5837 TTCTAGCAC-CT-TCT
i Nycticebus_coucang.k141_1514628                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771888 14 + 199412804 TTCTAGCAC-CT-TCT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1368152 14 +   3988456 TTATGCCAC-CC-TCT
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              508959 14 -   2017862 ttctgccac-at-tgt
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         148132 14 +    630418 ttctgctgcc-t-tcc
i Odocoileus_virginianus.KZ100018.1                      I 9 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          82522 14 -    150152 ttctgctgcc-t-tcc
i Okapia_johnstoni.LVCL01S0005463.1                      I 9 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    84439 14 +    102263 -TCCGCCACCCT-TCT
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2785307 14 -  10937097 ttctgctgcc-c-tct
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       466309 12 -    559221 ttc--ccacc-t-tgt
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         7221 14 +      8798 TTCTAGCAC-CT-TCT
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             699460 14 -   1103335 TTCTAGCAC-CT-TCT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   17590970 14 +  44047080 ttctgctgcc-t-tcc
i Ovis_aries.CM001607.2                                  I 9 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      179121 14 -    191736 ttctgctgcc-t-tcc
i Ovis_canadensis.OviCan_scaffold_2572                   I 9 C 0
s Pan_paniscus.KQ411613.1                                    48768 13 +     80009 tgctgccac--t-gct
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03001836.1                             34696 13 +     51860 tgctgccac--t-gct
i Pan_troglodytes.NBAG03001836.1                         I 332 I 89
s Panthera_onca.PanOnc_flattened_line_3271                  154378 13 +    230217 ctcttctgcc-t--ct
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                267694 13 +  18783137 ctcttctgcc-t--ct
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4724514 13 -   8748460 ctcttctgcc-t--ct
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1269851 14 -   2937107 ttctgctgcc-t-tcc
i Pantholops_hodgsonii.KE114653.1                        I 9 C 0
s Papio_anubis.CM001495.2                                183448703 13 + 183742232 tgctgccac--t-gct
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            12234 13 +     20448 tgctgccac--t-gct
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20569045 13 +  20919399 tgctgccac--t-gct
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                  10991 13 +     41871 tgctgccac--t-gct
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    14269 13 +     27711 tgctgccac--t-gct
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  5268 13 -     11374 tgctgccac--t-gct
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15779 13 -     78924 ctctaccacc-t--ct
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1182643                            238 14 -      3244 TTCTAGCAC-CT-TCT
i Perodicticus_ibeanus.k141_1182643                      C 0 C 0
s Perodicticus_potto.k141_1186926                              616 14 +     10374 TTCTAGCAC-CT-TCT
i Perodicticus_potto.k141_1186926                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18215189  7 -  18517816 -TCTGCCC--------
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_221660                     1187 14 -      2102 ctctgccacc-t-ctc
i Petromus_typicus.PetTyp_scaffold_221660                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              12378 14 +     63832 ttctgctgcc-c-tct
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            3631 13 +     68526 tgctgccac--c-gct
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        43768 13 +     89929 tgctgccac--c-gct
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            45184 13 +     51399 tgctgccac--c-gct
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14301420 13 -  14605196 TGCTGCCAC--C-GCT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             5778  7 +     22620 -------acc-t-tct
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 12 C 0
s Pithecia_albicans.k141_1476471                              7155 13 +     26961 tgctcccat--c-act
i Pithecia_albicans.k141_1476471                         I 10 C 0
s Pithecia_chrysocephala.k141_839575                          3282 13 +     23417 tgctcccat--c-act
i Pithecia_chrysocephala.k141_839575                     I 10 C 0
s Pithecia_hirsuta.k141_305604                                7147 13 +     29694 TGCTCGCAt--c-act
i Pithecia_hirsuta.k141_305604                           I 10 C 0
s Pithecia_mittermeieri.k141_446740                          32173 13 +     52772 tgctcccat--c-act
i Pithecia_mittermeieri.k141_446740                      I 10 C 0
s Pithecia_pissinattii.k141_1824269                           7169 13 +     26198 tgctcccat--c-act
i Pithecia_pissinattii.k141_1824269                      I 10 C 0
s Pithecia_pithecia.tarseq_165                             3943699 13 +   4542175 tgctcccat--c-act
i Pithecia_pithecia.tarseq_165                           I 10 C 0
s Pithecia_vanzolinii.k141_1697688                            7133 13 -     23490 tgctcccat--c-act
i Pithecia_vanzolinii.k141_1697688                       I 10 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610           1914 14 +      7680 ttctgctgcc-c-tct
i Platanista_gangetica.PlaMin_flattened_line_173610      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       11400 13 -     39866 TGCTCCCAC--C-ACT
i Plecturocebus_bernhardi.k141_2549090                   I 16 C 0
s Plecturocebus_brunneus.k141_1495506                        20563 13 +     34906 TGCTCCCAC--C-ACT
i Plecturocebus_brunneus.k141_1495506                    I 16 C 0
s Plecturocebus_caligatus.k141_1382851                       24825 13 +     87950 tgctcccac--c-act
i Plecturocebus_caligatus.k141_1382851                   I 16 C 0
s Plecturocebus_cinerascens.k141_1164729                     25652 13 +     88961 tgctcccac--c-act
i Plecturocebus_cinerascens.k141_1164729                 I 16 C 0
s Plecturocebus_cupreus.k141_2351393                         11322 13 +     39403 TGCTCCCAC--C-ACT
i Plecturocebus_cupreus.k141_2351393                     I 16 C 0
s Plecturocebus_dubius.k141_1058799                          25105 13 -     87928 tgctcccac--c-act
i Plecturocebus_dubius.k141_1058799                      I 16 C 0
s Plecturocebus_grovesi.k141_2013005                         32067 13 +     60166 TGCTCCCAC--C-ACT
i Plecturocebus_grovesi.k141_2013005                     I 16 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      32263 13 +     67232 tgctcccac--c-act
i Plecturocebus_hoffmannsi.k141_3303950                  I 16 C 0
s Plecturocebus_miltoni.k141_349282                          27736 13 +     90634 tgctcccac--c-act
i Plecturocebus_miltoni.k141_349282                      I 16 C 0
s Plecturocebus_moloch.k141_1031110                          25109 13 -     89403 tgctcccac--c-act
i Plecturocebus_moloch.k141_1031110                      I 16 C 0
s Pongo_abelii.CM009266.2                                189136556 13 + 189387572 TGCTGCCAC--C-GTT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9576166 13 +   9816681 tgctgccac--c-gtt
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               78708 13 -     81375 tgctgccac--c-gcc
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                             10544 13 +     19060 tgctgccac--c-gcc
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            15195  8 -     21651 -tctgtcac-------
i Psammomys_obesus.NESX01036370.1                        C 0 I 5
s Pteronotus_parnellii.KE909381.1                            18010 14 -     21811 ttctgttag-tg-gct
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_76658          1008 14 -      3818 ttctgctac-at-tgt
i Pteronura_brasiliensis.PteBra_flattened_line_76658     C 0 I 186
s Pteropus_alecto.KB030862.1                              22987407 14 +  28871421 ttctgctacc-t-tcc
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1370967 14 +   4952924 ttttgctacc-t-tcc
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20277584 13 -  38429054 ctcttccgcc-t--ct
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             20521 13 -     91421 tgctgccac--c-gct
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7614646 13 +   7812017 tgctgccac--c-gct
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             20551 13 -     72585 tgctgccac--c-gct
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  9970 14 +     55207 ttctgctgcc-t-tcc
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 9 C 0
s Rattus_norvegicus.chr16                                 53574597  8 +  90668790 -TCTGCCAC-------
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        370166 14 -   3329780 ttctgctacc-t-tct
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_1041714                            1114 13 +      5697 tgctgccac--c-gct
i Rhinopithecus_bieti.k119_1041714                       C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91241587 13 - 195417433 TGCTGCCAC--C-GCT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7677236 13 +   7961872 tgctgccac--c-gct
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_301684                 239 14 +       280 TTCCGCTAC-TT-TCC
i Rousettus_aegyptiacus.RouAeg_scaffold_301684           C 0 N 0
s Saguinus_bicolor.k141_8081                                  2882 12 +     42994 TGCTCCC-C--C-CCT
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                             1556 13 +      2253 TGCTCCCAC--C-CCT
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               2005 13 -      8737 TGCTCCCAC--C-CCT
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                              1637 13 +      2343 TGCTCCCAC--C-CCT
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209476539 12 + 209938924 tgctccc-c--c-cct
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                 964 13 -      7576 TGCTCCCAC--C-CCT
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_133311                       2428 14 +      9503 ttctgctgcc-t-gcc
i Saiga_tatarica.SaiTat_scaffold_133311                  I 9 C 0
s Saimiri_boliviensis.NW_024100920.1                     119952607 13 - 121099817 TGCTCCCAC--C-ACT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24949 13 +     46362 TGCTCCCAC--C-ACT
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               25044 13 +     45824 TGCTCCCAC--C-ACT
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             41722 13 -     64574 TGCTCCCAC--C-ACT
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4796 13 -     23631 TGCTCCCAC--C-ACT
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 24940 13 -     61129 TGCTCCCAC--C-ACT
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5422272 13 -   5703754 TGCTCCCAC--C-ACT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          57513 13 -     80660 TGCTCCCAC--C-ACT
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Semnopithecus_entellus.k141_1672505                         5380 13 -     12572 tgctgccac--c-gct
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      32233 13 +     39453 tgctgccac--c-gct
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           12737 13 +     27826 tgctgccac--c-gct
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            12283 13 -     19483 tgctgccac--c-gct
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      5579 13 -     12762 tgctgccac--c-gct
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           5422 13 +     13763 tgctgccac--c-gct
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     4402 14 -     30804 -TTTGCTACCCT-ACT
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               5102 14 +   1910179 accagcctcc-t-tct
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1957325 14 -   3870691 ttctgcaacc-t-tct
i Spermophilus_dauricus.KZ294078.1                       C 0 I 5
s Spilogale_gracilis.SpiGra_flattened_line_13525             33263 14 +     97271 ttctgctac-at-tgt
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              21828 13 -    196729 cccttcagcc-t--ct
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6814927 14 +  69701581 ttctgctgcc-t-tct
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                14529 14 +     41958 ttctgctacc-t-tct
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      122184 14 -    156842 ttccgccacc-t-tcc
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    390665 14 +    539355 ttccgccacc-t-tcc
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               29276 14 +     70052 TGCTGCCAC--CTTCA
i Tarsius_lariang.k141_2201908                           I 13 C 0
s Tarsius_wallacei.k141_254427                                4072 14 -     16117 TGCTGCCAC--CTTCA
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186433896 13 + 186847797 TGCTGCCAC--C-GCT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              108015 14 +    114563 ttctgccacc-t-ctc
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_85600                    5688 14 +     18632 ctctgccacc-t-cct
i Tolypeutes_matacus.TolMat_scaffold_85600               C 0 C 0
s Trachypithecus_auratus.k141_722599                         16319 13 -     20410 tgctgccac--c-gct
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      5439 13 -     12674 tgctgccac--c-gct
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       16427 13 +     19930 tgctgccac--c-gct
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      12827 13 -     19997 tgctgccac--c-gct
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            52970 13 -     60166 tgctgccac--c-gct
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        20433 13 -     27529 tgctgccac--c-gct
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                       2061 13 +      9229 tgctgccac--c-gct
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          13960 13 -     21137 tgctgccac--c-gct
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                    2065 13 +      9131 tgctgccac--c-gct
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                         2024 13 -      3730 tgctgccac--c-gct
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        30293 13 +     32220 tgctgccac--c-gct
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5944391 13 +   6242583 tgctgccac--c-gct
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       13648 13 +     20839 tgctgccac--c-gct
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    3853 14 +     27266 ttctgctgc-at-tct
i Tragulus_javanicus.TraJav_scaffold_40725               I 9 C 0
s Tupaia_chinensis.KB320699.1                              2166423 14 +   4065304 ttctgccac-tg-tct
i Tupaia_chinensis.KB320699.1                            I 4 C 0
s Tupaia_tana.TupTan_flattened_line_394                       2792 14 +     70247 ttctgccac-tg-tct
i Tupaia_tana.TupTan_flattened_line_394                  I 4 C 0
s Tursiops_truncatus.MRVK01000835.1                       15741559 14 +  33153633 ttctgctgcc-c-tct
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   57659 14 -     77625 tgctgccaac-t-tac
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4852918 14 -   5085361 ttctgccacc-t-tct
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 14423 14 -     43706 ttcagccacc-t-tgt
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          4360 14 +    224448 gtctgccacc-t-tct
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 5
s Zapus_hudsonius.ZapHud_scaffold_11398                      17675 15 +     63895 TTCTGCCACACT-TCA
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 8
s Ziphius_cavirostris.ZipCav_flattened_line_1389144            195 14 +       557 ttctgctgcc-c-tct
i Ziphius_cavirostris.ZipCav_flattened_line_1389144      n 14 I 125
e Cheracebus_torquatus.k141_1170026                          64344 81 +     76511 I
e Cheracebus_regulus.k141_471822                            159875 81 -    216457 I
e Cheracebus_lugens.k141_1393925                              2308 81 +     17877 I
e Cheracebus_lucifer.k141_49986                               2432 81 -     17098 I
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vicugna_pacos.KN270157.1                                 5374276 47 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tonatia_saurophila.TonSau_scaffold_294                     83346 714 +    610378 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Sorex_araneus.JH798187.1                                13653314 9235 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    156307 109 -    313613 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                       107181400  0 - 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Ondatra_zibethicus.OndZib_scaffold_7387                      632 3336 +    140218 I
e Octodon_degus.JH651603.1                                  750513 17 +  11899542 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                18000 920 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184766 1004 -  29670104 I
e Manis_pentadactyla.KN006162.1                              54034 31 -    317179 I
e Manis_javanica.JSZB01003497.1                              21892 31 +    737560 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     5119  0 +     14121 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20664195 469 +  22651954 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    39057 4687 +     67921 I
e Desmodus_rotundus.KZ672289.1                             8632254 708 +  20541912 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    839213  0 +   1526836 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1255607 4808 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Carollia_perspicillata.CarPer_scaffold_92756                7250 707 -     11696 I
e Camelus_ferus.KB017975.1                                  405530 47 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2337232 47 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10004760 47 -  17673402 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6909 705 +     43469 I
e Anoura_caudifer.AnoCau_scaffold_1412                      187499 706 +    412891 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      11433 33 +     62944 AGA--TC---T--TTGACCA-CG-GAAG--G--T-AAA-T-------GAACC--C-C-----T
s Acinonyx_jubatus.LLWD01001279.1                           835205 33 -   1699592 aac--tc---t--ttgacta-tg-tgag--a--c-caa-t-------gacct--t-c-----t
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     74652 33 +     87051 G----CCTC-C--TTGGCCA-GG-GACA--G--G--AACC-------AACCC--C-C-----T
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9513153 33 -  29979442 agc--tc---t--ttgacca-tg-taac--a--t-aaa-t-------gacct--t-c-----c
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             82058 33 -    347723 agc--tc---t--ttgacga-tg-taag--a--t-aaa-t-------aacct--t-c-----t
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     76224 10 -     89534 -------------------------------------A-T-------GAACC--T-C-----T
i Allactaga_bullata.AllBul_scaffold_9566                 I 13 C 0
s Allenopithecus_nigroviridis.k141_3361533                   20030 33 -     52922 aga--tc---t--ttggcca-ag-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         19961 33 -     28001 aga--tc---t--ttggcca-ag-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                         10448 33 -     18505 aga--tc---t--ttggcca-ag-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                          11313 33 -     12518 aga--tc---t--ttggcca-ag-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             11652 33 +     51355 aga--tc---t--ttgacca-ta-gaag--g--t-aaa-t-------gaatc--t-c-----t
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                4763 33 -     36483 aga--tc---t--ttgacca-ta-gaag--g--t-aaa-t-------gaatc--t-c-----t
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              15215 33 +     28687 aga--tc---t--ttgacca-ta-gaag--g--t-aaa-t-------gaatc--t-c-----t
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 3688 33 +     27940 aga--tc---t--ttgacca-ta-gaag--g--t-aaa-t-------gaatc--t-c-----t
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            4776 33 -      9457 aga--tc---t--ttgacca-ta-gaag--g--t-aaa-t-------gaatc--c-c-----t
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             3734 33 +     30492 aga--tc---t--ttgacca-ta-gaag--g--t-aaa-t-------gaatc--c-c-----t
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              7955 33 +     47717 aga--tc---t--ttgacca-ta-gaag--g--t-aaa-t-------gaatc--c-c-----t
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              4456 33 +      5663 aga--tc---t--ttgacca-ta-gaag--g--t-aaa-t-------gaatc--t-c-----t
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             18907 33 +     50774 aga--tc---t--ttgacca-ta-gaag--g--t-aaa-t-------gaatc--t-c-----t
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          680866 33 -   2318259 agc--tg---t--tttaccg-ca-aaag--a--a-aaa-c-------aaccc--t-c-----c
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303              2136 33 -     32520 agc--tc---t--ttgatca-ca-aaag--a--t-aaa-a-------aaccc--t-c-----c
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 C 0
s Aotus_azarae.k141_3104676                                  17448 33 -     33861 aga--tc---t--ttgacca-ca-gaag--g--t-aaa-t-------gaatc--a-t-----t
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            17446 33 -     34016 AGA--TC---T--TTGACCA-CA-GAAG--G--T-AAA-T-------GAATC--A-T-----T
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299873 33 -   5030052 AGA--TC---T--TTGACCA-CA-GAAG--G--T-AAA-T-------GAATC--A-T-----T
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             17482 33 -     34685 AGA--TC---T--TTGACCA-CA-GAAG--G--T-AAA-T-------GAATC--A-T-----T
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               30606 33 -     47192 aga--tc---t--ttgacca-ca-gaag--g--t-aaa-t-------gaatc--a-t-----t
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      15892 35 +     20879 A--CCTC---T--TTGACCA-CA-GAAG--G--A-AAA-G-------GACCC--T-C--TC-T
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_1648548                         571 33 +      5281 AGA--TC---T--TTGACAA-TG-GAAG--G--G-GAA-T-------GGACC--A-T-----C
i Arctocebus_calabarensis.k141_1648548                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21212134 33 -  21539123 gga--tc---t--ttgacca-ta-gaag--g--t-aaa-t-------gaatc--t-c-----t
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               46933 33 -     48001 aga--tc---t--ttgacca-ta-gaag--g--t-aaa-t-------gaatc--t-c-----t
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 29734 33 -     30947 aga--tc---t--ttgacca-ta-gaag--g--t-aaa-t-------gaatc--t-c-----t
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               11509 33 -     89868 gga--tc---t--ttgacca-ta-gaag--g--t-aaa-t-------gaatc--t-c-----t
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              15891 33 -     40414 aga--tc---t--ttgacca-ca-gaag--g--t-aaa-t-------gaatc--t-c-----t
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                23779 33 +     72325 aga--tc---t--ttgacca-ta-gaag--g--t-aaa-t-------gaatc--t-c-----t
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15195206 33 +  23207421 agt--tc---t--ttgacca-tg-gaag--a--t-ata-t-------aactc--t-c-----t
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         5671 33 -     18090 agt--tc---t--ttgacca-tg-gaag--a--t-ata-t-------aactc--t-c-----t
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    31946 33 +     34529 agc--tc---t--tttacca-ca-aaag--a--g-aaa-c-------aaccc--t-c-----c
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    204581 33 -    288883 agc--tc---t--tttaccg-ca-aaag--a--g-aaa-t-------aaccc--t-c-----c
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20277818 33 +  48749331 agc--tc---t--tttaccg-ca-aaag--a--g-aaa-t-------aaccc--t-c-----c
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1130372 33 -   1948126 agc--tc---t--tttaccg-ca-aaag--a--g-aaa-t-------aaccc--t-c-----c
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18088456 33 +  45695690 agc--tc---t--tttaccg-ca-aaag--a--g-aaa-t-------aaccc--t-c-----c
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2824408 33 +   4408762 aga--tc---t--tttacgg-ca-aaag--a--g-aaa-t-------aaccc--t-c-----c
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                104768 33 -    122966 aga--tc---t--ttgacca-ca-gaag--g--t-aaa-t-------gaatc--t-c-----t
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   64271 33 +     81800 aga--tc---t--ttgacca-ca-gaag--g--t-aaa-t-------gaatc--t-c-----c
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  33453 33 -     95584 aga--tc---t--ttgacca-ca-gaag--g--t-aaa-t-------gaatc--t-c-----t
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         57553 33 -    119600 aga--tc---t--ttgacca-ca-gaag--g--t-aaa-t-------gaatc--t-c-----t
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_10318                               1210 33 +     27907 AGA--TC---T--TTGACCA-CA-GAAG--G--T-AAA-T-------GAATC--A-T-----T
i Callibella_humilis.k141_10318                          C 0 C 0
s Callimico_goeldii.k141_737284                                851 33 -     31217 AGA--TC---T--TTGACTA-CA-GAAG--G--T-AAA-T-------GAATC--A-T-----T
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                             1146 33 +      5377 aga--tc---t--gtgacca-ca-gaag--g--t-aaa-t-------gaatc--a-t-----t
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23593007 33 - 189096842 AGA--TC---T--TTGACCA-CA-GAAG--G--T-AAA-T-------GAATC--A-T-----T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1821 33 -     12329 AGA--TC---T--TTGACCA-CA-GAAG--G--T-AAA-T-------GAATC--A-T-----T
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s CanFam4.chr16                                           17802822 33 -  60362399 agc--tc---t--ttaacca-tg-taag--a--t-aaa-t-------gacga--c-c-----t
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     3568 33 -     43241 agc--tc---t--ttaacca-tg-taag--a--t-aaa-t-------gacga--c-c-----t
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9038263 33 -   9314153 agc--tc---t--ttaacca-tg-taag--a--t-aaa-t-------gacga--c-c-----t
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17962739 33 -  59632846 agc--tc---t--ttaacca-tg-taag--a--t-aaa-t-------gacga--c-c-----t
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18504036 33 +  63665305 agc--tc---t--ttaacca-tg-taag--a--t-aaa-t-------gacga--c-c-----t
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18834891 33 +  46296322 agc--tg---t--tttaccg-ca-aaag--a--g-aaa-g-------aaccc--t-c-----c
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18065692 33 -  44709034 agc--tg---t--tttaccg-ca-aaag--a--g-aaa-g-------aaccc--t-c-----c
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    3582 33 -     12242 a----gctt-t--ttcgcca-ta-aaag--c--a-aaa-t-------aaacc--t-c-----t
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 13
s Carlito_syrichta.NW_007259797.1                           158792 33 -    496798 AGG--TC---T--TTGGCCA-TG-GAAG--G--T-AAA-C-------TAATC--T-C-----T
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    140327  4 +    179628 g----gc---t----------------------------------------------------
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     97345 30 +    217609 agc--tc---t--ttgacca-tg----a--a--t-aaa-t-------aatgc--t-c-----t
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18352163 33 -  23392119 a----actc-t--ttgatga-tg-aaag--a--a-aag-t-------gggtc--t-c-----t
i Cavia_aperea.AVPZ01000300.1                            C 0 I 16
s Cavia_porcellus.DS562891.1                              18364423 33 -  23407841 a----actc-t--ctgatga-tg-aaag--a--a-aag-t-------gggtc--t-c-----t
i Cavia_porcellus.DS562891.1                             C 0 I 16
s Cavia_tschudii.CavTsc_scaffold_8919                       103305 33 +    143979 a----actc-t--ttgatga-tg-aaag--a--a-aag-t-------gggtc--t-c-----t
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 I 16
s Cebuella_pygmaea.k141_793006                                 847 33 -     15088 AGA--TC---T--TTGACCA-CA-GAAG--G--T-AAA-T-------GAATC--A-T-----T
i Cebuella_pygmaea.k141_793006                           C 0 C 0
s Cebus_albifrons.Contig27                                25654327 33 +  26074798 AGA--CC---T--TTGACCA-CA-GAAG--G--T-AAA-T-------GCATC--A-T-----T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                2265 33 +     28840 AGA--CC---T--TTGACCA-CA-GAAG--G--T-AAA-T-------GCATC--A-T-----T
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 1994 33 +     14051 AGA--CC---T--TTGACCA-CA-GAAG--G--T-AAA-T-------GCATC--A-T-----T
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         8596 33 +     31688 agg--tc---t--ttggcca-tg-gaag--g--t-aaa-c-------taatc--t-c-----t
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12234884 33 +  27778364 agc--tc---t--ttgatca-ag-gaag--a--t-aaa-t-------gactc--t-c-----t
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5907 33 -     25243 agc--tc---t--ttgatca-ag-gaag--a--t-aaa-t-------gactc--t-c-----t
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4480978 21 +   4669795 AGA--TC---T--TTGGCCG-TG-GAAA--G--T-----------------------------
i Cercocebus_atys.KQ010504.1                             C 0 I 7
s Cercocebus_chrysogaster.k141_1540778                        5479 21 +     17872 aga--tc---t--ttggccg-tg-gaaa--g--t-----------------------------
i Cercocebus_chrysogaster.k141_1540778                   C 0 I 7
s Cercocebus_lunulatus.k141_3342297                           6067 21 -     14043 aga--tc---t--ttggccg-tg-gaaa--g--t-----------------------------
i Cercocebus_lunulatus.k141_3342297                      C 0 I 7
s Cercocebus_torquatus.k141_3057011                          14166 21 +     27781 aga--tc---a--ttggccg-tg-gaaa--g--t-----------------------------
i Cercocebus_torquatus.k141_3057011                      C 0 I 7
s Cercopithecus_ascanius.k141_1024104                        14326 33 -     20310 aga--tc---t--ttggcca-ag-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          17299 33 +     29689 aga--tc---t--ttggcca-ag-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           12058 33 -     20078 aga--tc---t--ttggcca-ag-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          19972 33 -     27936 aga--tc---t--ttggcca-ag-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            8845 33 -     17152 aga--tc---t--ttggcca-ag-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38828572 33 +  39242232 aga--tc---t--ttggcca-ag-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21228077 33 -  21565898 aga--tc---t--ttggcca-ag-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       45189 33 -     53127 aga--tc---t--ttggcca-ag-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        5450 33 +     13442 aga--tc---t--ttggcca-ag-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       19992 33 -     27947 aga--tc---t--ttggcca-ag-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         3020 33 +     10558 aga--tc---t--ttggcca-ag-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          6023 33 +     14005 aga--tc---t--ttggcca-ag-gaag--g--c-aaa-t-------gaacc--t-c-----t
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            7600 28 -      8501 agc--tc---a--ttggcca-gg-gaag--g--t-aaa-c-----------a--t-c------
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 C 0
s Chiropotes_albinasus.k141_2206961                           2629 33 -     15524 CGA--TC---T--TTGACCA-CA-GAAG--G--T-AAA-C-------GAATC--A-T-----T
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chiropotes_israelita.k141_747660                          101896 33 +    146308 aga--tc---t--ttggcca-ca-gaag--g--t-aaa-t-------gaatc--t-g-----t
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          33703 33 -     50570 aga--tc---t--ttggcca-ca-gaag--g--t-aaa-t-------gaatc--t-g-----t
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18433895 33 -  18827391 aga--tc---t--ttggcca-ag-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       20391 33 -     50209 aga--tc---t--ttggcca-ag-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135427397 33 + 135778131 AGA--TC---T--TTGGCCA-AG-GAAG--G--T-AAA-T-------GAACC--T-C-----T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1915933 33 +   2368649 AGA--TC---T--TTGACCA-CG-GAAG--G--T-AAA-G-------GAACC--T-C-----T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199954174 33 + 200372422 aga--tc---t--ttgacca-cg-gaag--g--t-aaa-g-------gaacc--t-c-----t
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              42483 33 +     84244 AGA--TC---T--TTGGCCA-CG-GAAG--G--T-AAA-G-------GAACC--T-C-----T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17552849 32 -  53390261 agc--tc---t--ttgagca-cg-gaag--a--t-aaa-t-------gagcc--t-c------
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           4071 13 +     23735 agc--tc---t--ttaaaca-------------------------------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 I 9
s Cricetomys_gambianus.CriGam_scaffold_18520                 54120 32 +     63868 g----tctc-c--ttgacca-ga-gata--a--a--aa-t-------ggccc--c-c-----t
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11669643 33 + 224834208 g----cctg-c--tcaacca-ga-gaca--g--a--aa-tg------cgctc--c-t-----t
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               6910 32 -     19598 AGC--TC---T--TTGACCA-GA-GAAG--A--T-A-A-G-------GAATT--T-G-----T
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             31756 33 -     87169 aac--tc---t--ttgacta-tg-taag--a--t-cat-t-------gacct--t-c-----t
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  38507 33 +     51376 a----actt-t--ttgacca-ta-aaag--g--a-aac-t-------aaacc--t-t-----t
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900             3130 33 -     75252 a----actc-t--ttgacta-tg-aaag--a--a-aga-t-------aaacc--t-c-----t
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            70603 29 +   2246927 cgc--tc---a--ttgggca-gc-gaag--g--t-aaa-c-----------c--t-c-----t
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16815081 33 +  35494412 agt--tc---a--ttgacca-tg-gaag--a--t-ata-t-------aactc--t-c-----t
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  676726 33 +   1390856 agc--tc---t--ttgatca-aa-gaag--a--t-aaa-t-------gactc--t-c-----t
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    9486 33 +    198055 agc--tc---t--ttgatca-ag-gaag--a--t-aaa-t-------gactc--t-c-----t
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 35857 33 -     42551 a----actc-t--ttgacta-tg-aaag--a--a-aaa-g-------ggacc--t-c-----t
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 I 16
s Eidolon_helvum.KE797349.1                                    974 33 -     31197 gtc--tc---t--ttgacca-ta-gata--a--t-aaa-t-------gaccc--t-t-----t
i Eidolon_helvum.KE797349.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       315348 33 +    607251 agc--tc---t--ttgacca-ca-aaag--a--c-aaa-t-------aaccc--t-c-----c
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          25001 34 -    110024 G----TATC-C--TCAACAA-GA-GACC--G--A--AAAG------GCCCCC--C-A-----T
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                            4930 35 +      8657 g----tatc-c--tcaataa-ga-gaca--g--a--aaagg------ccccc--ctg-----t
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16339275 33 -  41312741 aac--tt---t--ttgatca-cg-taag--a--t-aaa-t-------gacct--t-c-----t
i Enhydra_lutris.KZ291758.1                              I 186 C 0
s Eptesicus_fuscus.JH977646.1                              2151006 16 -  14770903 --------------------------ag--a--g-aaa-t-------gatcc--t-t-----t
i Eptesicus_fuscus.JH977646.1                            I 13 C 0
s Equus_asinus.JREZ01000139.1                              1287020 33 +   4378816 agc--tt---t--ttgatga-tg-gaag--a--t-aga-t-------gacct--t-c-----t
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18534828 33 -  39960074 agc--tt---t--ttgatga-tg-gaag--a--t-aga-t-------gacct--t-c-----t
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               36857 33 +    498745 agc--tt---t--ttgatga-tg-gaag--a--t-aga-t-------gacct--t-c-----t
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21210567 33 -  21539334 CGA--TC---T--TTGGCCA-Ag-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           14504 33 +    133382 agt--tc---t--ttgacca-tg-gaag--a--t-ata-t-------aactc--t-c-----t
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             28453 33 -     44125 agt--tc---t--ttgacca-tg-gaag--a--t-ata-t-------aactc--t-c-----t
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20240337 33 + 206538554 aac--tc---t--ttgacta-tg-tgag--a--t-caa-t-------gacct--t-c-----t
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20199209 33 + 205367284 aac--tc---t--ttgacta-tg-tgag--a--t-caa-t-------gacct--t-c-----t
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 12869 33 -     36744 aac--tc---t--ttgacta-tg-tgag--a--t-caa-t-------gacct--t-c-----t
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             852938 33 +   3816255 a----gctc-t--ttgacca-ca-aaag--g--g-aaa-t-------gaacc--t-c-----t
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg2040                                     429743 33 -    453645 AGG--TC---T--TTGACAA-TG-GAAG--G--G-GAA-T-------GGACC--A-T-----C
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             7433 33 +     11339 AGG--TC---T--TTGACAA-TG-GAAG--G--G-GAA-T-------GGACC--A-T-----C
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            4722 33 +     41679 AGG--TC---T--TTGACAA-TG-GAAG--G--G-GAA-T-------GGACC--A-T-----C
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               5965 35 -      9135 agc--tc---t--ttgacca-ca-gaaaaag--t-aaa-g-------gaaca--t-c-----t
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     612590 33 -    660261 agc--tc---t--ttggtca-ca-gaag--a--t-aaa-t-------aaccc--t-c-----c
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            35681 33 +     49224 a--gctc---t--ttgacca-tg-gaag--a--a-aaa-g-------gaacc--t-c-----t
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_2066350                                820 33 +      1742 aga--tc---t--ttgacca-cg-gaag--g--t-aaa-t-------gaacc--c-c-----t
i Gorilla_beringei.k141_2066350                          I 60 I 56
s Gorilla_gorilla.CYUI03001204.1                             18248 33 -     63219 aga--tc---t--ttgacca-cg-gaag--g--t-aaa-t-------gaacc--c-c-----t
i Gorilla_gorilla.CYUI03001204.1                         I 60 I 56
s Graphiurus_murinus.GraMur_scaffold_10447                   37304 33 +     78134 a--gctc---t--ttgacca-tt-gaag--a--a-aaa-t-------gagtt--t-c-----t
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               245567 33 +    327341 aat--tc---t--ttgacta-tg-taag--a--t-cct-g-------gacct--t-c-----t
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 23185 33 +     36099 agc--tg---t--tttaccg-ca-aaag--a--g-aaa-c-------aaccc--t-c-----c
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               113936 28 +    128679 agt--tc---t--ttgacca-tg-gaag--a--t-aaa-t-------aac-------------
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       113730 33 +   1711038 aca--tc---t--ttgacca-tg-gaag--a--t-aaa-t-------gaccc--t-c-----t
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188               2296 33 +      9903 aca--tc---t--ttgacca-tg-gaag--a--t-aaa-c-------gaccg--t-c-----t
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 C 0
s Hoolock_leuconedys.ctg274                                    440245 33 +    630532 aga--tc---t--ttgacca-cg-gaag--a--t-aaa-t-------gaacc--t-c-----t
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  48539 28 +     55795 -------------ttgacta-tgttaag--a--t-caa-t-------gacct--t-c-----t
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 2 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            27251 33 -    143317 a----actc-t--ttgacta-tg-ataa--g--a-aaa-t-------ggaca--t-c-----t
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 16
s Hystrix_cristata.HysCri_scaffold_5660                      85409 34 +    135385 a----gc---tgtttgaccactg-aaag--g--a-aaa-t-------gaacc--t-c-----t
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7525460 26 -   7955117 --------------tgctga-ag-ggga--a--a-aaa-g-------gacct--t-c-----t
i Ictidomys_tridecemlineatus.JH393364.1                  I 5 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                2288 33 -     31341 agt--tc---t--ttgacca-tg-gaag--a--t-ata-t-------aactc--t-c-----c
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8278975 10 -   9596543 -------------------------------------A-C-------AAACA--T-C-----T
i Jaculus_jaculus.JH725527.1                             I 8 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                 2027 33 -     18011 agt--tc---t--ttgatca-tg-gaaa--a--t-ata-t-------aactc--t-c-----t
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         17952 30 -     38430 aga--tc---t--ttgacca-ta-gaag--g--t-aaa-t-------gaatc-----------
i Lagothrix_lagothricha.k141_1005387                     C 0 I 1
s Lasiurus_borealis.LasBor_scaffold_50988                    19270 33 +     29960 agc--tc---t--cagcaca-ag-gagg--a--g-aaa-t-------aatcc--t-t-----t
i Lasiurus_borealis.LasBor_scaffold_50988                C 0 I 204
s Leontocebus_fuscicollis.k141_1820339                        9585 33 +     64341 cga--tc---t--ttgacca-ca-gaag--g--t-aaa-t-------gaatc--a-t-----t
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           1927 33 -     35062 CGA--TC---T--TTGACCA-CA-GAAG--G--T-AAA-T-------GAATC--A-T-----T
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        9614 33 +     35603 GGA--TC---T--TTGACCA-CA-GAAG--G--T-AAA-T-------GAATC--A-T-----T
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    31230 33 +     38576 aga--tc---t--ttgacca-ta-gaag--g--t-aaa-t-------gaatc--a-t-----t
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         27934 33 +     66356 aga--tc---t--ttgacca-ca-gaag--g--t-aaa-t-------gaatc--a-t-----t
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3059208 33 +   3914936 agc--tc---t--ttgacca-tg-taag--a--t-aaa-t-------gacct--t-c-----t
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             271559 33 -    662738 agt--tc---t--ttgacca-tg-gaag--a--t-ata-t-------aactc--t-c-----t
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1442527 21 +   1826925 aga--tc---t--ttggcca-tg-gaaa--g--t-----------------------------
i Lophocebus_aterrimus.ctg367                            C 0 I 7
s Loris_lydekkerianus.k141_399337                            17767 31 -     33856 AGG--TC---T--T--ACAA-TA-GAAG--G--G-AAA-G-------GGACC--A-T-----C
i Loris_lydekkerianus.k141_399337                        C 0 C 0
s Loris_tardigradus.ctg83                                  1015478 31 +   6120653 AGG--TC---T--T--ACAA-TA-GAAG--G--G-AAA-G-------GGACC--A-T-----C
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17958979 33 -  59628241 agc--tc---t--ttaacca-tg-taag--a--t-aaa-t-------gacga--c-c-----t
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                              12338 21 +     40492 aga--tc---t--ttggccg-tg-gaaa--g--t-----------------------------
i Macaca_arctoides.k141_2326796                          C 0 I 7
s Macaca_assamensis.Contig5                               59681588 21 +  60120075 aga--tc---t--ttggccg-tg-gaaa--g--t-----------------------------
i Macaca_assamensis.Contig5                              C 0 I 7
s Macaca_cyclopis.k119_18836                                 18134 21 -     26193 aga--tc---t--ttggccg-tg-gaaa--g--t-----------------------------
i Macaca_cyclopis.k119_18836                             C 0 I 7
s Macaca_fascicularis.k141_814140                            85909 21 -    114318 aga--tc---t--ttggccg-tg-gaaa--g--t-----------------------------
i Macaca_fascicularis.k141_814140                        C 0 I 7
s Macaca_fuscata.k119_255327                                 11600 21 -     23192 aga--tc---t--ttggccg-tg-gaaa--g--t-----------------------------
i Macaca_fuscata.k119_255327                             C 0 I 7
s Macaca_leonina.k141_3550399                                21065 21 -     29190 aga--tc---t--ttggccg-tg-gaaa--g--t-----------------------------
i Macaca_leonina.k141_3550399                            C 0 I 7
s Macaca_maura.k141_2733130                                  29644 21 +     37952 aga--tc---t--ttggccg-tg-gaaa--g--t-----------------------------
i Macaca_maura.k141_2733130                              C 0 I 7
s Macaca_mulatta.NC_041758.1                             186844717 21 + 187317192 AGA--TC---T--TTGGCTG-TG-GAAA--G--T-----------------------------
i Macaca_mulatta.NC_041758.1                             C 0 I 7
s Macaca_nemestrina.KQ007038.1                            25463298 21 -  25927173 ATA--TC---T--TTGGCCG-TG-GAAA--G--T-----------------------------
i Macaca_nemestrina.KQ007038.1                           C 0 I 7
s Macaca_nigra.k141_1655396                                  85502 21 +     89720 aga--tc---t--ttggccg-tg-gaaa--g--t-----------------------------
i Macaca_nigra.k141_1655396                              C 0 I 7
s Macaca_radiata.k141_3680011                                12514 21 +     20474 aga--tc---t--ttggccg-tg-gaaa--g--t-----------------------------
i Macaca_radiata.k141_3680011                            C 0 I 7
s Macaca_siberu.k141_635500                                  12288 21 -     14993 aga--tc---t--ttggccg-tg-gaaa--g--t-----------------------------
i Macaca_siberu.k141_635500                              C 0 I 7
s Macaca_silenus.Contig273                                  335151 21 -    668171 aga--tc---t--ttggccg-tg-gaaa--g--t-----------------------------
i Macaca_silenus.Contig273                               C 0 I 7
s Macaca_thibetana.k99_256239                                10578 21 -     24072 aga--tc---t--ttggccg-tg-gaaa--g--t-----------------------------
i Macaca_thibetana.k99_256239                            C 0 I 7
s Macaca_tonkeana.k141_1498238                               31209 21 -     45290 aga--tc---t--ttggccg-tg-gaaa--g--t-----------------------------
i Macaca_tonkeana.k141_1498238                           C 0 I 7
s Macroglossus_sobrinus.MacSob_scaffold_4024                  6016 33 +    270270 atc--tc---t--ttgacca-ta-catg--a--t-aaa-t-------gaccc--t-t-----t
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23942800 21 -  24302211 aga--tc---t--ttggccg-tg-gaaa--g--t-----------------------------
i Mandrillus_leucophaeus.scaffold280                     C 0 I 7
s Mandrillus_sphinx.Contig270                               356908 21 +    752769 aga--tc---t--ttggccg-tg-gaaa--g--t-----------------------------
i Mandrillus_sphinx.Contig270                            C 0 I 7
s Marmota_marmota.CZRN01000018.1                          33106543 26 -  40650429 --------------tgctga-ag-gggg--a--a-aaa-g-------gacct--t-c-----t
i Marmota_marmota.CZRN01000018.1                         I 5 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        16584 33 -    207569 acc--cc---t--ttgacca-tg-ggag--a--t-aaa-c-------taccc--t-t-----t
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             12853 33 +     13704 aac--tt---t--ttgatca-tg-taag--a--t-aaa-t-------gacct--t-c-----t
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 37585 33 +    140813 g----gctc-c--ttggcca-ga-gaca--g--g--atac-------aaccc--c-c-----t
i Meriones_unguiculatus.MerUng_scaffold_7390             I 5 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    6720 33 +     10310 agt--tc---t--ttgacca-tg-gaag--a--t-ata-t-------aactc--t-c-----t
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Mico_argentatus.k141_1024458                                 846 33 -     20047 AAA--TC---T--TTGACCA-CA-GAAG--G--T-AAA-T-------GAATC--A-T-----T
i Mico_argentatus.k141_1024458                           C 0 C 0
s Mico_humeralifer.k141_1346949                               1259 33 +      1399 AGA--TC---T--TTGACCA-CA-GAAG--G--T-AAA-T-------GAATC--A-T-----T
i Mico_humeralifer.k141_1346949                          C 0 C 0
s Mico_schneideri.k141_916733                                        846 33 +      5107 AGA--TC---T--TTGACCA-CA-GAAG--G--T-AAA-T-------GAATC--A-T-----T
i Mico_schneideri.k141_916733                                  C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1853763 33 +   8254450 agc--tc---t--ttgatcg-tg-gaca--a--g-aaa-t-------gacgc--t-t-----t
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             37441 33 +     64694 agc--tc---t--ttgatcg-tg-gaca--a--g-aaa-t-------gacgc--t-t-----t
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                          14475 33 -     28506 aga--tc---t--ttggcca-ag-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_55178          395 18 +     26817 agc--tc---t--ttgacca-tg-taa------------------------------------
i Mirounga_angustirostris.MirAng_flattened_line_55178    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    30465 33 -    437263 agt--tc---t--ttgacca-tg-gaag--a--t-ata-t-------aactc--t-c-----t
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 144473 33 -    366855 agc--tc---t--ttgagcg-tg-gaag--a--g-aaa-t-------ggccc--t-t-----t
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   4772 33 +     82753 agc--tc---t--ttgacct-ca-aaag--a--t-aaa-t-------aatcc--g-c-----c
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_40893                     574 33 +      5729 aat--tc---t--ttgacta-cg-taag--a--t-cct-t-------gacct--t-c-----t
i Mungos_mungo.MunMun_flattened_line_40893               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                          11004 33 +     14753 agc--tc---t--tagaaca-tg-gaag--a--g-aaa-t-------gaccc--t-t-----c
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84365178 33 - 120012414 G----CCTC-T--TTgacca-ga-gaca--g--a--aaac-------agcCC--C-C-----T
i Mus_caroli.LT608237.1                                  I 6 C 0
s Mus_musculus.chr8                                       87654582 33 - 129401213 G----TCTC-T--TTGGCCA-GA-GACA--G--A--AAAC-------AACCC--C-C-----T
i Mus_musculus.chr8                                      I 6 C 0
s Mus_pahari.LT608297.1                                   31359284 34 -  89631738 g----cctc-t--ttggcca-ga-gaca--a--a--aaac-------aaccc-cc-c-----t
i Mus_pahari.LT608297.1                                  I 6 C 0
s Mus_spretus.CM004101.1                                  90757369 33 - 130317789 G----CTTC-T--TTGGCCA-GA-GACA--G--A--AAAC-------AACCC--C-C-----T
i Mus_spretus.CM004101.1                                 I 6 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              8929 33 +     14296 a--gtcc---t--ttgacca-tg-gaag--a--a-aaa-g-------gaacc--t-c-----t
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               304351 33 -  14710649 aac--tt---t--ttgacca-tg-taag--a--t-aaa-t-------gacct--t-c-----t
i Mustela_putorius.JH418006.1                            I 187 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     73762 33 -     80779 a----gctt-t--ttggcca-ta-aaag--g--a-aaa-t-------aaact--t-c-----t
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 I 14
s Myotis_brandtii.KE162005.1                                284486 33 -  10118263 agc--tc---t--tagaacc-tg-caag--a--g-aaa-t-------gaccc--t-t-----t
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1591804 33 -   6019432 agc--tc---t--tagaaca-tg-gaag--t--g-aaa-t-------gaccc--t-t-----t
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3907905 33 -   4330536 agc--tc---t--tagaaca-tg-gaag--a--g-aaa-t-------gaccc--t-t-----t
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_44643                         2461 33 +     25416 agc--tc---t--tagaaca-tg-gaag--a--g-aaa-t-------gacct--t-t-----t
i Myotis_myotis.MyoMyo_scaffold_44643                    C 0 C 0
s Nannospalax_galili.KL204047.1                            2040125 32 -   3037898 c----accc-c--ttgatca-ca-gagg--g--a--aa-t-------gaccc--t-t-----t
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               20540 33 +     21681 aga--tc---t--ttgacca-tg-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20310148 33 +  31847680 agc--tc---t--ttgacca-tg-taag--a--t-aaa-t-------gacct--t-c-----t
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5869430 33 +   7148211 agt--tc---t--ttgatca-tg-gaag--a--t-aca-t-------aactc--t-c-----t
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    760702 33 +    783361 agc--tc---t--ttgaaca-ag-aaag--a--g-aaa-t-------ggccc--a-t-----t
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9152896 33 -   9404916 agc--tc---t--ttaacca-tg-taag--a--t-aaa-t-------tacct--t-c-----t
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102595980 33 - 196305487 AGG--TC---T--TTGACAA-TG-GAAG--G--G-GAA-G-------AGACC--A-T-----C
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1514628                             1447 33 -      5837 AGG--TC---T--TTGACAA-TG-GAAG--G--G-GAA-G-------AGACC--A-T-----C
i Nycticebus_coucang.k141_1514628                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771902 33 + 199412804 AGG--TC---T--TTGACAA-TG-GAAG--G--G-GAA-G-------GGACC--A-T-----C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1368166 33 +   3988456 GGG--TC---T--TCAGCAA-TA-AAAG--G--A-CAG-T-------GAAAC--T-T-----A
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              508973 33 -   2017862 agc--tc---t--ttgatga-tg-taag--a--t-aaa-t-------gacct--t-c-----t
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         148146 33 +    630418 agg--tc---t--ttgacca-ca-aaag--a--t-aaa-g-------aaccc--t-c-----c
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          82536 33 -    150152 agc--tc---t--ttgacca-ca-aaag--a--t-aaa-t-------aaccc--t-c-----c
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    84453 32 +    102263 G----CCTC-C--TCAACAA-CA-GACA--G--A--AA-A-------AGCCC--C-C-----T
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2785321 33 -  10937097 agt--tc---t--ttgacca-tg-gaag--a--t-ata-t-------aactc--t-c-----t
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       466321 33 -    559221 agc--tc---t--tgaaccg-tg-taag--a--t-aaa-t-------gacct--t-c-----t
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         7235 33 +      8798 AGG--TC---T--TTGACAA-TG-GAAG--G--G-GAA-T-------GGACC--A-T-----C
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             699474 33 -   1103335 AGG--TC---T--TTGACAA-TG-GAAG--G--G-GAA-T-------GGACC--A-T-----C
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   17590984 33 +  44047080 agc--tg---t--tttaccg-ca-aaag--a--g-aaa-c-------aaccc--t-c-----c
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      179135 33 -    191736 agc--tg---t--tttaccg-ca-aaag--a--g-aaa-c-------aaccc--t-c-----c
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    48781 33 +     80009 agA--TC---T--TTGACCA-CA-GAAG--G--T-AAA-T-------GAACC--C-C-----T
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03002948.1                             24711 39 +     28717 aGA--TC---T--TTGACCA-CG-GAAG--G--TTAAA-T-------GAACC--C-CGAGCCT
i Pan_troglodytes.NBAG03002948.1                         I 14 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  154391 33 +    230217 aac--tc---t--ttgacta-tg-tgag--a--t-caa-t-------gacct--t-c-----t
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                267707 33 +  18783137 aac--tc---t--ttgacta-tg-tgag--a--t-caa-t-------gacct--t-c-----t
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4724527 33 -   8748460 aac--tc---t--ttgacta-tg-tgag--a--t-caa-t-------gacct--t-c-----t
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1269865 33 -   2937107 agc--tg---t--tttaccg-ca-aaag--a--g-aaa-c-------aaccc--t-c-----c
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183448716 21 + 183742232 agA--TC---T--TTGGCCG-TG-GAAA--G--T-----------------------------
i Papio_anubis.CM001495.2                                C 0 I 7
s Papio_cynocephalus.k141_4307930                            12247 21 +     20448 aga--tc---t--ttggccg-tg-gaaa--g--t-----------------------------
i Papio_cynocephalus.k141_4307930                        C 0 I 7
s Papio_hamadryas.Contig39                                20569058 21 +  20919399 aga--tc---t--ttggccg-tg-gaaa--g--t-----------------------------
i Papio_hamadryas.Contig39                               C 0 I 7
s Papio_kindae.k141_1936966                                  11004 21 +     41871 aga--tc---t--ttggccg-tg-gaaa--g--t-----------------------------
i Papio_kindae.k141_1936966                              C 0 I 7
s Papio_papio.k141_802527                                    14282 21 +     27711 aga--tc---t--ttggccg-tg-gaaa--g--t-----------------------------
i Papio_papio.k141_802527                                C 0 I 7
s Papio_ursinus.k141_5274964                                  5281 21 -     11374 aga--tc---t--ttggccg-tg-gaaa--g--t-----------------------------
i Papio_ursinus.k141_5274964                             C 0 I 7
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15792 29 -     78924 aat--tc---t--ttg-----tg-taac--a--t-aaa-t-------gacca--t-c-----t
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1182643                            252 33 -      3244 AGG--TC---T--TTGACAA-TG-GAAG--G--G-AAA-T-------GGACC--A-T-----C
i Perodicticus_ibeanus.k141_1182643                      C 0 C 0
s Perodicticus_potto.k141_1186926                              630 33 +     10374 AGG--TC---T--TTGACAA-TG-GAAG--G--G-AAA-T-------GGACC--A-T-----C
i Perodicticus_potto.k141_1186926                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18215196  4 -  18517816 ---------------------------------------------------C--C-C-----T
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_221660                     1201 33 -      2102 a----gctc-t--ttgactg-ca-aaag--g--a-aca-t-------aaacc--t-c-----t
i Petromus_typicus.PetTyp_scaffold_221660                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              12392 33 +     63832 agt--tc---t--ttgatca-tg-gaag--a--t-ata-t-------aactc--t-c-----t
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            3644 33 +     68526 aga--tc---t--ttgacca-tg-gaag--g--t-aaa-t-------gaatc--t-c-----t
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        43781 33 +     89929 aga--tc---t--ttgacca-tg-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            45197 33 +     51399 aga--tc---t--ttgacca-tg-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14301433 33 -  14605196 AGA--TC---T--TTGACCA-TG-GAAG--G--T-AAA-T-------GAACC--T-C-----T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             5785 33 +     22620 agc--tc---t--tagaaca-gg-gaag--g--g-aaa-g-------gaccc--t-t-----c
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pithecia_albicans.k141_1476471                              7168 33 +     26961 aga--tc---t--ttgacca-ca-gaag--g--t-aaa-t-------gaatc--t-c-----t
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          3295 33 +     23417 aga--tc---t--ttgacca-ca-gaag--g--t-gaa-t-------gaatc--t-c-----t
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                7160 33 +     29694 aga--tc---t--ttgacca-ca-gaag--g--t-aaa-t-------gaatc--t-c-----t
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          32186 33 +     52772 aga--tc---t--ttgacca-ca-gaag--g--t-aaa-t-------gaatc--t-c-----t
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           7182 33 +     26198 aga--tc---t--ttgacca-ca-gaag--g--t-aaa-t-------gaatc--t-c-----t
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3943712 33 +   4542175 aga--tc---t--ttgacca-ca-gaag--g--t-gaa-t-------gaatc--t-c-----t
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            7146 33 -     23490 aga--tc---t--ttgacca-ca-gaag--g--t-aaa-t-------gaatc--t-c-----t
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610           1928 33 +      7680 agt--tc---t--ttgacca-tg-gaag--a--t-ata-t-------aactc--t-c-----t
i Platanista_gangetica.PlaMin_flattened_line_173610      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       11413 33 -     39866 GTA--TC---T--TTGACCA-CA-GAAG--G--T-AAA-T-------Gaatc--t-c-----t
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        20576 33 +     34906 GTA--TC---T--TTGACCA-CA-GAAG--G--T-AAA-T-------Gaatc--t-c-----t
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       24838 33 +     87950 gta--tc---t--ttgacca-ca-gaag--g--t-aaa-t-------gaatc--t-c-----t
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     25665 33 +     88961 gta--tc---t--ttgacca-ca-gaag--g--t-aaa-t-------gaatc--t-c-----t
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         11335 33 +     39403 GTA--TC---T--TTGACCA-CA-GAAG--G--T-AAA-T-------Gaatc--t-c-----t
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          25118 33 -     87928 gta--tc---t--ttgacca-ca-gaag--g--t-aaa-t-------gaatc--t-c-----t
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         32080 33 +     60166 GTA--TC---T--TTGACCA-CA-GAAG--A--T-AAA-T-------Gaatc--t-c-----t
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      32276 33 +     67232 gta--tc---t--ttgacca-ca-gaag--g--t-aaa-t-------gaatc--t-c-----t
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          27749 33 +     90634 gta--tc---t--ttgacca-ca-gaag--g--t-aaa-t-------gaatc--t-c-----t
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          25122 33 -     89403 gta--tc---t--ttgacca-ca-gaag--g--t-aaa-t-------gaatc--t-c-----t
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189136569 33 + 189387572 CGA--TC---T--TTGACCA-CG-GAAG--G--T-AAA-T-------GAACC--T-C-----T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9576179 33 +   9816681 cga--tc---t--ttgacca-cg-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               78721 33 -     81375 aga--tc---t--ttgacca-tg-ggag--g--t-aaa-t-------gaacc--t-c-----t
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                             10557 33 +     19060 aga--tc---t--ttgacca-tg-ggag--g--t-aaa-t-------gaacc--t-c-----t
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            15208 28 -     21651 g----gctc-c--ttggcca-ga-gaca--g--g--atac-------aac-------------
i Psammomys_obesus.NESX01036370.1                        I 5 C 0
s Pteronotus_parnellii.KE909381.1                            18024 33 -     21811 agt--tc---t--ttgaaca-tg-gaag--t--g-aaa-c-------gatcc--c-t-----t
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_76658          1208 33 -      3818 aac--tt---t--ttgatca-tg-taag--a--t-aaa-t-------gacct--t-c-----t
i Pteronura_brasiliensis.PteBra_flattened_line_76658     I 186 C 0
s Pteropus_alecto.KB030862.1                              22987421 33 +  28871421 atc--tc---t--ttgacca-ta-gatg--a--t-aaa-t-------gaccc--t-t-----t
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1370981 33 +   4952924 atg--tc---t--ttgacca-ta-gatg--a--t-aaa-t-------gaccc--t-t-----t
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20277597 33 -  38429054 aac--tc---t--ttgacta-tg-tgag--a--t-caa-t-------gacct--t-c-----t
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             20534 33 -     91421 aga--tc---t--ttgacca-tg-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7614659 33 +   7812017 aga--tc---t--ttgacca-tg-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             20564 33 -     72585 aga--tc---t--ttgacca-tg-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  9984 33 +     55207 agg--tc---t--ttgacca-ca-aaag--a--t-aaa-g-------aaccc--t-c-----c
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53574605 22 +  90668790 ------------------CA-GA-GACA--G--A--AAAC-------AACCC--C-C-----T
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        370180 31 -   3329780 aca--tc---t--tgaa--a-tg-gaaa--a--t-aaa-t-------gaccc--t-t-----t
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_1041714                            1127 33 +      5697 aga--tc---t--ttgacca-tg-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Rhinopithecus_bieti.k119_1041714                       C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91241600 33 - 195417433 AGA--TC---T--TTGACCA-TG-GAAG--G--T-AAA-T-------GAACC--T-C-----T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7677249 33 +   7961872 aga--tc---t--tcgacca-tg-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_121563                 253 33 +      1157 atc--tc---t--ttgacca-ta-gatg--a--t-aaa-t-------gaccc--t-t-----t
i Rousettus_aegyptiacus.RouAeg_scaffold_121563           N 0 C 0
s Saguinus_bicolor.k141_8081                                  2894 33 +     42994 CGA--TC---T--TTGACCA-CA-GAAG--G--T-AAA-C-------GAATC--A-T-----T
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                             1569 33 +      2253 CGA--TC---T--TTGACCA-CA-GAAG--G--T-AAA-T-------GAACC--A-T-----T
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               2018 33 -      8737 CGA--TC---T--TTGACCA-CA-GAAG--G--T-AAA-T-------GAACC--A-T-----T
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                              1650 33 +      2343 CGA--TC---T--TTGACCA-CA-GAAG--G--T-AAA-T-------GAACC--A-T-----T
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209476551 33 + 209938924 cga--tc---t--ttgacca-ca-gaag--g--t-aaa-t-------gaatc--a-t-----t
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                 977 33 -      7576 CGA--TC---T--TTGACCA-CA-GAAG--G--T-AAA-T-------GAACC--A-T-----T
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_133311                       2442 33 +      9503 agc--tc---t--tttaccg-ca-aaag--a--g-aaa-c-------aaccc--t-c-----c
i Saiga_tatarica.SaiTat_scaffold_133311                  C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119952620 33 - 121099817 AGA--CC---T--TTGACCA-TA-GAGG--G--T-AAA-T-------GCATC--A-T-----T
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24962 33 +     46362 AGA--CC---T--TGGACCA-TA-GAGG--G--T-AAA-T-------GCATC--A-T-----T
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               25057 33 +     45824 AGA--CC---T--TGGACCA-TA-GAGG--G--T-AAA-T-------GCATC--A-T-----T
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             41735 33 -     64574 AGA--CC---T--TGGACCA-TA-GAGG--G--T-AAA-T-------GCATC--A-T-----T
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4809 33 -     23631 AGA--CC---T--TTGACCA-TA-GAGG--G--T-AAA-T-------GCATC--A-T-----T
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 24953 33 -     61129 AGA--CC---T--TGGACCA-TA-GAGG--G--T-AAA-T-------GCATC--A-T-----T
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5422285 33 -   5703754 AGA--CC---T--TTGACCA-CA-GAAG--G--T-AAA-T-------GCATC--A-T-----T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          57526 33 -     80660 AGA--CC---T--TTGACCA-CA-GAAG--G--T-AAA-T-------GCATC--A-T-----T
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Semnopithecus_entellus.k141_1672505                         5393 33 -     12572 aga--tc---t--ttgacca-tg-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      32246 33 +     39453 aga--tc---t--ttgacca-tg-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           12750 33 +     27826 aga--tc---t--ttgacca-tg-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            12296 33 -     19483 aga--tc---t--ttgacca-tg-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      5592 33 -     12762 aga--tc---t--ttgacca-tg-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           5435 33 +     13763 aga--tc---t--ttgacca-tg-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     4416 34 -     30804 G----TCTC-C--TCCACAG-GA-GACA--A--A--GA-A-------GCCCCCAC-C-----T
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               5116 33 +   1910179 gcc--ac---t--ttgattt-ta-gaag--a--t-aaa-t-------gaagc--t-t-----t
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1957344 26 -   3870691 --------------tgctga-ag-ggaa--a--a-aaa-g-------gacct--t-c-----t
i Spermophilus_dauricus.KZ294078.1                       I 5 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             33277 33 +     97271 agg--tc---t--ttaacca-tg-taag--a--t-aaa-t-------aacct--t-c-----t
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              21841 33 -    196729 aat--tc---t--tagacta-tg-taag--a--t-cct-t-------gacct--t-c-----t
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6814941 30 +  69701581 agc--tc---t--ttggcca-tg----a--a--t-aaa-t-------aaccc--t-c-----t
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                14543 33 +     41958 agc--tc---t--ttgaaca-tg-gaag--a--g-aaa-t-------aaccc--t-t-----t
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      122198 33 -    156842 agc--tc---t--ttgatcg-ag-gaag--a--t-aaa-t-------gaccc--t-c-----t
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    390679 33 +    539355 agc--tc---t--ttgatcg-ag-gaag--a--t-aaa-t-------gaccc--t-c-----t
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               29290 33 +     70052 AGG--TC---T--TTGGCCA-TG-GAAC--G--T-AAG-C-------TAATC--T-T-----T
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                4086 33 -     16117 AGG--TC---T--TTGGCCA-TG-GAAC--G--T-AAA-C-------TAATC--T-T-----T
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186433909 21 + 186847797 AGA--TC---T--TTGGCCA-TG-GAAA--G--T-----------------------------
i Theropithecus_gelada.CM009954.1                        C 0 I 7
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              108029 33 +    114563 a----gctc-t--ttgaccA-CA-AAAG--G--A-ACA-T-------AAACC--T-C-----T
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_85600                    5702 29 +     18632 agc--tc---a--ctggcca-gg-ggag--g--t-aaa-c-----------a--t-c-----c
i Tolypeutes_matacus.TolMat_scaffold_85600               C 0 C 0
s Trachypithecus_auratus.k141_722599                         16332 33 -     20410 aga--tc---t--ttgacca-tg-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      5452 33 -     12674 aga--tc---t--ttgacca-tg-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       16440 33 +     19930 aga--tc---t--ttgacca-tg-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      12840 33 -     19997 aga--tc---t--ttgacca-tg-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            52983 33 -     60166 aga--tc---t--ttgacca-tg-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        20446 33 -     27529 aga--tc---t--ttgacca-tg-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                       2074 33 +      9229 aga--tc---t--ttgacca-tg-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          13973 33 -     21137 aga--tc---t--ttgacca-tg-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                    2078 33 +      9131 aga--tc---t--ttgacca-tg-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                         2037 33 -      3730 aga--tc---t--ttgacca-tg-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        30306 33 +     32220 aga--tc---t--ttgacca-tg-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5944404 33 +   6242583 aga--tc---t--ttgacca-tg-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       13661 33 +     20839 aga--tc---t--ttgacca-tg-gaag--g--t-aaa-t-------gaacc--t-c-----t
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    3867 33 +     27266 agt--cc---t--ttgacca-tg-gaag--a--t-aaa-t-------aaccc--t-c-----t
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tupaia_chinensis.KB320699.1                              2166437 32 +   4065304 agc--tc---t--ttgacaa-tg-gaag--a--t-aa--t-------gaacc--t-c-----t
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       2806 32 +     70247 ggc--tc---t--ttgacaa-tg-gaag--a--t-aa--t-------gaacc--t-c-----t
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15741573 33 +  33153633 agt--tc---t--ttgacca-tg-gaag--a--t-ata-t-------aactc--t-c-----t
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   57673 32 -     77625 agc--tc---t--ttgacca-ta-gaag--a--c-aaa-t-------ga-gt--t-c-----t
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4852932 35 -   5085361 agt--tc---t--ttgacca-tg-taac--atgt-aaa-t-------gacct--t-c-----c
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 14437 33 -     43706 agc--tc---t--ttcacca-tg-taag--a--t-aaa-t-------gacct--t-c-----t
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          4379 33 +    224448 --------------tgctca-aa-gaaa--a--a-aaa-ggcggggggacct--t-c-----t
i Xerus_inauris.XerIna_scaffold_2302                     I 5 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      17698 10 +     63895 -------------------------------------A-G-------Gaacc--t-c-----t
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 8 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_1424488            209 33 -       542 agt--tc---t--ttgacca-tg-gaag--a--t-ata-t-------aattc--t-c-----t
i Ziphius_cavirostris.ZipCav_flattened_line_1424488      I 14 C 0
e Cheracebus_torquatus.k141_1170026                          64344 81 +     76511 I
e Cheracebus_regulus.k141_471822                            159875 81 -    216457 I
e Cheracebus_lugens.k141_1393925                              2308 81 +     17877 I
e Cheracebus_lucifer.k141_49986                               2432 81 -     17098 I
e Echinops_telfairi.JH980293.1                            48781881 13 + 111700974 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1476 16 +      4343 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vicugna_pacos.KN270157.1                                 5374276 47 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294941 30 +  10818551 I
e Tonatia_saurophila.TonSau_scaffold_294                     83346 714 +    610378 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Sorex_araneus.JH798187.1                                13653314 9235 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    156307 109 -    313613 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15790 14 -     22811 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                       107181400  0 - 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12271 14 -     18566 I
e Ondatra_zibethicus.OndZib_scaffold_7387                      632 3336 +    140218 I
e Octodon_degus.JH651603.1                                  750513 17 +  11899542 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                18000 920 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24593 14 -    145209 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184766 1004 -  29670104 I
e Manis_pentadactyla.KN006162.1                              54034 31 -    317179 I
e Manis_javanica.JSZB01003497.1                              21892 31 +    737560 I
e Loxodonta_africana.GL010049.1                            4219653 30 -  43346337 I
e Lepus_americanus.LepAme_scaffold_107385                     5119  0 +     14121 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3337 14 +      7595 I
e Heterocephalus_glaber.JH602082.1                        20664195 469 +  22651954 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    39057 4687 +     67921 I
e Desmodus_rotundus.KZ672289.1                             8632254 708 +  20541912 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    839213  0 +   1526836 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1255607 4808 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Carollia_perspicillata.CarPer_scaffold_92756                7250 707 -     11696 I
e Camelus_ferus.KB017975.1                                  405530 47 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2337232 47 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10004760 47 -  17673402 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6909 705 +     43469 I
e Anoura_caudifer.AnoCau_scaffold_1412                      187499 706 +    412891 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      11466 31 +     62944 AGAGGCCTAG-GTT---T--CT--T---ACCT-GTAAA--GCAGG
s Acinonyx_jubatus.LLWD01001279.1                           835238 30 -   1699592 tcagacagac-gtt---t--c---t---acct-gtaaa--atcag
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     74685 13 +     87051 CCAGGATTAA-ATA-------------------------------
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 8
s Ailuropoda_melanoleuca.LNAT01000098.1                    9513186 30 -  29979442 ccatacctaa-gtt---t--c---t---accc-ataaa--atggg
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             82091 30 -    347723 ccatacctta-gtt---t--c---t---acct-gtaaa--atggg
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     76234  6 -     89534 CCAGGC---------------------------------------
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   20063 31 -     52922 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         19994 31 -     28001 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                         10481 31 -     18505 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                          11346 31 -     12518 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             11685 31 +     51355 caagacctag-gtt---t--ct--t---atct-gtaaa--gcaag
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                4796 31 -     36483 caagacctag-gtt---t--ct--c---atct-gtaaa--gcagg
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              15248 31 +     28687 caagacctag-gtt---t--ct--t---atct-gtaaa--gcaag
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 3721 31 +     27940 caagacctag-gtt---t--ct--t---atct-gtaaa--gcagg
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            4809 31 -      9457 caagacctag-gtt---t--ct--t---atct-gtgaa--gcagg
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             3767 31 +     30492 caagacctag-gtt---t--ct--t---atct-gtaaa--gcagg
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              7988 31 +     47717 caagacctag-gtt---t--ct--t---atct-gtaaa--gcagg
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              4489 31 +      5663 caagacctag-gtt---t--ct--t---atct-gtaaa--gcagg
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             18940 31 +     50774 caagacctag-gtt---t--ct--t---atct-gtaaa--gcagg
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          680899 30 -   2318259 ccaggcctaa-gtt---t--c---t---aact-gta--aaatgag
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303              2169 30 -     32520 ccaggcctaa-gtt---t--c---t---aact-gta--aaatgag
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 C 0
s Aotus_azarae.k141_3104676                                  17481 31 -     33861 caagacctag-ggt---t--ct--t---atct-gtaaa--gcagg
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            17479 31 -     34016 CAAGACCTAG-GGT---T--CT--T---ATCT-GTAAA--GCAGG
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299906 31 -   5030052 CAAGACCTAG-GGT---T--CT--T---ATCT-GTAAA--GCAGG
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             17515 31 -     34685 CAAGACCTAG-GGt---t--ct--t---atct-gtaaa--gcagg
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               30639 31 -     47192 caagacctag-ggt---t--ct--t---atct-gtaaa--gcagg
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      15927  7 +     20879 CTAGGCT--------------------------------------
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_1648548                         604 24 +      5281 CCATG--------T---T--CT--T---ATCT-ATAAA--ACAGA
i Arctocebus_calabarensis.k141_1648548                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21212167 31 -  21539123 caagacctag-gtt---t--ct--t---atct-gtaaa--gcagg
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               46966 31 -     48001 caagacctag-gtt---t--ct--t---atct-gtaaa--gcagg
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 29767 31 -     30947 caagacctag-gtt---t--ct--t---atct-gtaaa--gcagg
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               11542 31 -     89868 caagacctag-gtt---t--ct--t---atct-gtaaa--gcagg
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              15924 31 -     40414 caagacctag-gtt---t--ct--t---atct-gtaaa--gcagg
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                23812 31 +     72325 caagacctag-gtt---t--ct--t---atct-gtaaa--gcagg
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15195239 30 +  23207421 ccaggtctaa-gtt---t--c---t---aact-gtaaa--atggg
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         5704 30 -     18090 ccaggtctaa-gtt---t--c---t---aact-gtaaa--atggg
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    31979 30 +     34529 ccaggcctaa-gtt---t--c---t---aact-gta--aaatgag
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    204614 30 -    288883 ccgggcctaa-gtt---t--c---t---aact-gta--aaatgag
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20277851 30 +  48749331 ccgggcctaa-gtt---t--c---t---aact-gta--aaatgag
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1130405 30 -   1948126 ccgggcctaa-gtt---t--c---t---aact-gta--aaatgag
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18088489 30 +  45695690 ccgggcctaa-gtt---t--c---t---aact-gta--aaatgag
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2824441 30 +   4408762 ccgggcctaa-gtt---t--c---t---aact-gta--aaatgag
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                104801 31 -    122966 caaaacctag-gtt---t--gt--t---atct-gtaaa--gcagg
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   64304 31 +     81800 caaaacctag-gtt---t--gt--t---atct-gtaaa--gcagg
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  33486 31 -     95584 caaaacctag-gtt---t--gt--t---atct-gtaaa--gcagg
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         57586 31 -    119600 caaaacctag-gtt---t--gt--t---atct-gtaaa--gcagg
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_10318                               1243 31 +     27907 CAAGAcctag-gtt---t--ct--t---atct-gtaaa--gcagg
i Callibella_humilis.k141_10318                          C 0 C 0
s Callimico_goeldii.k141_737284                                884 30 -     31217 CAAGAcctag-gtt---t--ct--t---atct-gtaaa--gca-g
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                             1179 31 +      5377 caagacctag-gtt---t--ct--t---atct-gcaaa--gcagg
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23593040 31 - 189096842 CAAGACCTAG-GTT---T--CT--T---ATCT-GTAAA--GCAGG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1854 31 -     12329 CAAGAcctag-gtt---t--ct--t---atct-gcaaa--gcagg
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s CanFam4.chr16                                           17802855 30 -  60362399 tcagacctaa-gtt---t--c---t---atgt-gtaaa--atggg
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     3601 30 -     43241 tcagacctaa-gtt---t--c---t---atgt-gtaaa--atggg
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9038296 30 -   9314153 tcagacctaa-gtt---t--c---t---atgt-gtaaa--atggg
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17962772 30 -  59632846 tcagacctaa-gtt---t--c---t---atgt-gtaaa--atggg
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18504069 30 +  63665305 tcagacctaa-gtt---t--c---t---atgt-gtaaa--atggg
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18834924 30 +  46296322 ccaggcctaa-gtt---t--c---t---aaca-gca--aaatgag
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18065725 30 -  44709034 ccaggcctaa-gtt---t--c---t---aaca-gca--aaatgag
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    3628 18 -     12242 ------------------------tcttatcc-ataag--gtaag
i Capromys_pilorides.CapPil_scaffold_65020               I 13 C 0
s Carlito_syrichta.NW_007259797.1                           158825 31 -    496798 CCAGGTCTAT-ATT---T--CT--T---AGCT-GAAAA--ATAGG
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    140331 11 +    179628 -------------------------------t-gtaaa--ataat
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     97375 31 +    217609 ccaggcctaa-gttt--t--t---t---atct-gtaaa--atgag
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18352212 15 -  23392119 ------------------------t---atct-gtaaa--atgag
i Cavia_aperea.AVPZ01000300.1                            I 16 C 0
s Cavia_porcellus.DS562891.1                              18364472 15 -  23407841 ------------------------t---atct-gtaca--atgag
i Cavia_porcellus.DS562891.1                             I 16 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                       103354 15 +    143979 ------------------------t---atct-gtaca--atgag
i Cavia_tschudii.CavTsc_scaffold_8919                    I 16 C 0
s Cebuella_pygmaea.k141_793006                                 880 31 -     15088 CAAGAcctag-gtt---t--ct--t---atct-gtaaa--gcagg
i Cebuella_pygmaea.k141_793006                           C 0 C 0
s Cebus_albifrons.Contig27                                25654360 31 +  26074798 CAAGAcctag-gtt---t--ct--t---atct-gttaa--gcagc
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                2298 31 +     28840 CAAGACCTAG-GTT---T--CT--T---ATCT-GTTAA--GCAGC
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 2027 31 +     14051 CAAGACCTAG-GTT---T--CT--T---ATCT-GTTAA--GCAGC
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         8629 31 +     31688 ccaggtctac-att---t--ct--t---agct-gaaaa--atagg
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12234917 30 +  27778364 ccacgtctac-att---t--c---t---gtct-gtaaa--atggg
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5940 30 -     25243 ccacgtctac-att---t--c---t---gtct-gtaaa--atggg
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4481006 31 +   4669795 CAAGGCCTag-gtt---t--ct--t---atct-gtaaa--gcaGC
i Cercocebus_atys.KQ010504.1                             I 7 C 0
s Cercocebus_chrysogaster.k141_1540778                        5507 31 +     17872 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Cercocebus_chrysogaster.k141_1540778                   I 7 C 0
s Cercocebus_lunulatus.k141_3342297                           6095 31 -     14043 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Cercocebus_lunulatus.k141_3342297                      I 7 C 0
s Cercocebus_torquatus.k141_3057011                          14194 31 +     27781 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Cercocebus_torquatus.k141_3057011                      I 7 C 0
s Cercopithecus_ascanius.k141_1024104                        14359 31 -     20310 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          17332 31 +     29689 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           12091 31 -     20078 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          20005 31 -     27936 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            8878 31 -     17152 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38828605 31 +  39242232 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21228110 31 -  21565898 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       45222 31 -     53127 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        5483 31 +     13442 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       20025 31 -     27947 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         3053 31 +     10558 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          6056 31 +     14005 taaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_138870            7628 20 -      8501 ccaggcctag-att---ttct---t---at---------------
i Chaetophractus_vellerosus.ChaVel_scaffold_138870       C 0 I 1
s Chiropotes_albinasus.k141_2206961                           2662 31 -     15524 CAAGATCTag-gtt---t--ct--t---atct-gtaaa--gcagg
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chiropotes_israelita.k141_747660                          101929 31 +    146308 caagagctag-gtt---t--gt--t---atct-gtaaa--gcagg
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          33736 31 -     50570 caagagctag-gtt---t--gt--t---atct-gtaaa--gcagg
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18433928 31 -  18827391 cgaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       20424 31 -     50209 cgaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135427430 31 + 135778131 CGAGGCCTag-gtt---t--ct--t---atct-gtaaa--gcaGC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_484642               1492  2 +      4343 ------------------------------tc-------------
i Chrysochloris_asiatica.ChrAsi_scaffold_484642          I 16 C 0
s Colobus_angolensis.KN981557.1                            1915966 31 +   2368649 CAAGGCCTag-gtt---t--ct--t---atct-gtaaa--gcaGC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199954207 31 + 200372422 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              42516 31 +     84244 CAAGGCCTAG-GTT---T--CT--T---ATCT-GTAAA--GCAGC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17552881 29 -  53390261 ----atctaa-gtgtggt--g---t---atct-gtaaa--gtgag
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           4093 30 +     23735 tcaggcctaa-gtt---t--c---t---atct-ataaa--atggg
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      I 9 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 54152 31 +     63868 ccacgattaa-att---t--ct--t---gtct-acaaa--ataag
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11669676 30 + 224834208 ccgggattaa-att---t--ct--t---tcct-acg-a--ttaag
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               6942 28 -     19598 CAAGACC--T-GTT---T--C---T---GTAT-GTAAA--TTGAT
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             31789 30 -     87169 tcagacctaa-gtt---t--c---t---acct-gtcaa--atggg
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  38540 13 +     51376 ccaggcctaa-gtt-------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 18
s Dasyprocta_punctata.DasPun_flattened_line_15900             3163 13 -     75252 ctaggcctaa-gtt-------------------------------
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 18
s Dasypus_novemcinctus.JH564415.1                            70632 20 +   2246927 ccaggccccg-ctt---ttct---t---ac---------------
i Dasypus_novemcinctus.JH564415.1                        C 0 I 1
s Delphinapterus_leucas.KZ290073.1                        16815114 30 +  35494412 ccaggtctaa-gtt---t--c---t---aact-gtaaa--atggg
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  676759 30 +   1390856 ccacgtctac-att---t--c---t---gtct-gtaaa--atggg
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    9519 30 +    198055 ccacgtctac-att---t--c---t---gtcc-gtaaa--atggg
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 35906 15 -     42551 ------------------------t---atct-gtaaa--atgag
i Dolichotis_patagonum.DolPat_scaffold_30833             I 16 C 0
s Echinops_telfairi.JH980293.1                            48781894  2 + 111700974 ------------------------------TT-------------
i Echinops_telfairi.JH980293.1                           I 13 C 0
s Eidolon_helvum.KE797349.1                                   1007 30 -     31197 ccaggcctaa-gtt---t--c---t---atct-ataaa--atggg
i Eidolon_helvum.KE797349.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       315381 30 +    607251 cgaggcctca-gtt---t--c---t---aact-gta--aaatgag
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          25035 31 -    110024 CCAGAATTAA-ATT---T--CT--T---ATCTGAAA-A--ATAAG
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                            4965 31 +      8657 ccaggattaa-att---t--ct--t---atctgtaa-a--ataag
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16339308 30 -  41312741 ccacacctaa-gtt---t--c---t---acct-ctaaa--atggg
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2151022 30 -  14770903 ccaggcttaa-gtt---t--c---t---atct-gtaaa--atggg
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1287053 30 +   4378816 ccaggcctac-att---t--c---t---gtct-gtaaa--atggg
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18534861 30 -  39960074 ccaggcctac-att---t--c---t---gcct-gtaaa--atggg
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               36890 30 +    498745 ccaggcctac-att---t--c---t---gcct-gtaaa--atggg
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21210600 31 -  21539334 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           14537 30 +    133382 ccaggtctaa-gtt---t--c---t---aact-gtaaa--atggg
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             28486 30 -     44125 ccaggtctaa-gtt---t--c---t---aact-gtaaa--atggg
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20240370 30 + 206538554 tcagacagaa-gtt---t--c---t---acct-gtaaa--atcag
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20199242 29 + 205367284 tcagacagaa-gtt---t--c---t---acct-gtaaa--at-ag
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 12902 30 -     36744 tcagacagaa-gtt---t--c---t---acct-gtaaa--atcag
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             852971 31 +   3816255 ccaggcctaa-gtt---t--ct--t---attc-ataaa--ataag
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg2040                                     429776 31 -    453645 CCATGCCTAA-GTT---T--TT--T---ATCT-ATAAA--ACAGA
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             7466 31 +     11339 CCATGCCTAA-GTT---T--TT--T---ATCT-ATAAA--ACAGA
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            4755 31 +     41679 CCATGCCTAA-GTT---T--CT--T---ATCT-ATAAA--ACAGA
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               6000 31 -      9135 ccaggcctaa-gtt---t--ct--t---atct-gtaga--ctagg
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     612623 30 -    660261 ccaggcctaa-gtt---t--c---t---aact-gta--aaatgag
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            35714 31 +     49224 ccaagcttaa-gtt---t--ct--t---atcc-ataaa--ataag
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              20692 31 -     32273 cgaggcctag-ctt---t--ct--t---acct-gtaaa--gcagg
i Gorilla_beringei.k141_3596273                          I 33 C 0
s Gorilla_gorilla.LT578341.1                             186342827 31 + 186649187 cgaggcctag-ctt---t--ct--t---acct-gtaaa--gcagg
i Gorilla_gorilla.LT578341.1                             I 33 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   37337 31 +     78134 ccaagattaa-gtt---t--ct--t---accc-ataaa--gtaag
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               245600 30 +    327341 tcagacctag-gtt---t--c---t---acct-gtcaa--atgag
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 23218 30 +     36099 ccaggcctaa-ctt---t--c---t---aact-gta--aagtgag
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_122365                3351  2 +      7595 ------------------------------GT-------------
i Heterohyrax_brucei.HetBruBak_scaffold_122365           I 14 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               113964 25 +    128679 -----cctta-gct---t--c---t---aacg-gtaaa--atggg
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       113763 30 +   1711038 ccaggcctaa-gtt---t--c---t---atct-gtaaa--atggg
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188               2329 30 +      9903 ctaggcccaa-gtt---t--c---t---atct-gtaaa--atgga
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 C 0
s Hoolock_leuconedys.ctg274                                    440278 31 +    630532 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagg
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  48567 29 +     55795 tcagacttaa-gtt---t--c---g---acct-gtaaa--atgg-
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            27300 15 -    143317 ------------------------t---atct-gtaaa--atgag
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 16 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      85443 31 +    135385 ccgggtctaa-gtt---t--ct--t---atct-gtaaa--ataat
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7525486 31 -   7955117 ctaggcttaa-gtt---t--ct--t---atct-gtaaa--ataag
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                2321 30 -     31341 ccaggtctaa-gtt---t--c---t---aact-gtaaa--atggg
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8278985  6 -   9596543 CCAGGC---------------------------------------
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                 2060 30 -     18011 ccaggtctat-gtt---c--c---t---aact-gtaaa--atggg
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         17983 31 -     38430 caagacctag-gtt---t--ct--t---atct-gtaaa--gcagg
i Lagothrix_lagothricha.k141_1005387                     I 1 C 0
s Lasiurus_borealis.LasBor_scaffold_50988                    19507 30 +     29960 ccaggcttat-gtt---t--c---c---atct-gtaaa--atggg
i Lasiurus_borealis.LasBor_scaffold_50988                I 204 I 197
s Leontocebus_fuscicollis.k141_1820339                        9618 31 +     64341 caagacctag-gtt---t--ct--t---atct-gtaaa--gcagg
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           1960 31 -     35062 CAAGAcctag-gtt---t--ct--t---atct-gtaaa--gcagg
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        9647 31 +     35603 CAAGAcctag-gtt---t--ct--t---atct-gtaaa--gcagg
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    31263 31 +     38576 caagacctag-gtt---t--ct--t---atct-gtaaa--gcagg
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         27967 31 +     66356 caagacctag-gtt---t--ct--t---atct-gtaaa--gcagg
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3059241 30 +   3914936 ccacacctaa-gtt---t--c---t---acct-gtgaa--atggg
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             271592 30 -    662738 ccaggtctaa-gtt---t--c---t---aact-gcaaa--atggg
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1442555 31 +   1826925 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcggc
i Lophocebus_aterrimus.ctg367                            I 7 C 0
s Loris_lydekkerianus.k141_399337                            17798 31 -     33856 TCATGCCTAT-GTT---T--CT--T---ATCT-ATAAA--ACAGA
i Loris_lydekkerianus.k141_399337                        C 0 C 0
s Loris_tardigradus.ctg83                                  1015509 31 +   6120653 TCATGCCTAT-GTT---T--CT--T---ATCT-ATAAA--ACAGA
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                            4219683  2 -  43346337 ------------------------------TT-------------
i Loxodonta_africana.GL010049.1                          I 30 C 0
s Lycaon_pictus.CM007581.1                                17959012 30 -  59628241 tcagacctaa-gtt---t--c---t---atgt-gtaaa--atggg
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                              12366 31 +     40492 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Macaca_arctoides.k141_2326796                          I 7 C 0
s Macaca_assamensis.Contig5                               59681616 31 +  60120075 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Macaca_assamensis.Contig5                              I 7 I 4
s Macaca_cyclopis.k119_18836                                 18162 31 -     26193 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Macaca_cyclopis.k119_18836                             I 7 C 0
s Macaca_fascicularis.k141_814140                            85937 31 -    114318 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Macaca_fascicularis.k141_814140                        I 7 C 0
s Macaca_fuscata.k119_255327                                 11628 31 -     23192 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Macaca_fuscata.k119_255327                             I 7 C 0
s Macaca_leonina.k141_3550399                                21093 31 -     29190 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Macaca_leonina.k141_3550399                            I 7 C 0
s Macaca_maura.k141_2733130                                  29672 31 +     37952 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Macaca_maura.k141_2733130                              I 7 C 0
s Macaca_mulatta.NC_041758.1                             186844745 31 + 187317192 CAAGGCCTag-gtt---t--ct--t---atct-gtaaa--gcagC
i Macaca_mulatta.NC_041758.1                             I 7 C 0
s Macaca_nemestrina.KQ007038.1                            25463326 31 -  25927173 CAAGGCCTag-gtt---t--ct--t---atct-gtaaa--gcaGC
i Macaca_nemestrina.KQ007038.1                           I 7 C 0
s Macaca_nigra.k141_1655396                                  85530 31 +     89720 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Macaca_nigra.k141_1655396                              I 7 C 0
s Macaca_radiata.k141_3680011                                12542 31 +     20474 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Macaca_radiata.k141_3680011                            I 7 C 0
s Macaca_siberu.k141_635500                                  12316 31 -     14993 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Macaca_siberu.k141_635500                              I 7 C 0
s Macaca_silenus.Contig273                                  335179 31 -    668171 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Macaca_silenus.Contig273                               I 7 C 0
s Macaca_thibetana.k99_256239                                10606 31 -     24072 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Macaca_thibetana.k99_256239                            I 7 I 4
s Macaca_tonkeana.k141_1498238                               31237 31 -     45290 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Macaca_tonkeana.k141_1498238                           I 7 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                  6049 30 +    270270 ccaggcctaa-ggt---t--c---t---attc-ataaa--atggg
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23942828 31 -  24302211 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Mandrillus_leucophaeus.scaffold280                     I 7 C 0
s Mandrillus_sphinx.Contig270                               356936 31 +    752769 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Mandrillus_sphinx.Contig270                            I 7 C 0
s Marmota_marmota.CZRN01000018.1                          33106569 31 -  40650429 ctaggcttaa-gtt---t--ct--t---atct-gtaaa--ataag
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        16617 30 -    207569 taaggcctaa-gtt---t--g---t---acct-ataaa--atggg
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             12886 30 +     13704 ccacacctaa-gtt---t--c---t---acct-gtaaa--atggg
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 37618 31 +    140813 ccaggtttaa-aca---t--tt--t---gtct-gtaaa--ataaa
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    6753 30 +     10310 ccaggtctaa-gtt---t--c---t---aact-gtaaa--atggg
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Mico_argentatus.k141_1024458                                 879 31 -     20047 CAAGAcctag-gtt---t--ct--t---atct-gtaaa--gcagg
i Mico_argentatus.k141_1024458                           C 0 C 0
s Mico_humeralifer.k141_1346949                               1292 31 +      1399 CAAGAcctag-gtt---t--ct--t---atct-gtata--gcagg
i Mico_humeralifer.k141_1346949                          C 0 C 0
s Mico_schneideri.k141_916733                                        879 31 +      5107 CAAGAcctag-gtt---t--ct--t---atct-gtaaa--gcagg
i Mico_schneideri.k141_916733                                  C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    24607  2 -    145209 ------------------------------TT-------------
i Microgale_talazaci.MicTal_scaffold_6613                I 14 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1853796 29 +   8254450 -caggcctaa-ggt---t--t---t---atct-gtaaa--atggg
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             37474 29 +     64694 -caggcctaa-ggt---t--t---t---atct-gtaaa--atggg
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                          14508 31 -     28506 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_55178          413 27 +     26817 ---cacctaa-gtt---t--c---t---acct-gtgaa--atggg
i Mirounga_angustirostris.MirAng_flattened_line_55178    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    30498 30 -    437263 ccaggtctaa-gtt---t--c---t---aact-gtaaa--atggg
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 144506 29 -    366855 -cagggccaa-gtt---t--c---t---ccct-gcaaa--atggg
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   4805 30 +     82753 ccaggcctaa-gtt---t--c---t---aact-gta--aaatgag
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_40893                     607 30 +      5729 tcagacctag-gtt---t--c---t---acca-gtcaa--atgag
i Mungos_mungo.MunMun_flattened_line_40893               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                          11037 30 +     14753 ccaggcttaa-gtt---t--c---t---gtct-gtaaa--atggg
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84365211 31 - 120012414 CCAGGATTAA-ATT---T--CT--T---CTCA-GTAAA--ATAAA
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87654615 31 - 129401213 CCAGGATTAA-att---t--ct--t---ctct-gtaaa--ataaa
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31359318 31 -  89631738 ccaggattaa-att---t--ct--t---ctca-gtaaa--ataaa
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90757402 31 - 130317789 CCAGAATTAA-ATT---A--CT--T---CTCA-GTAAA--ATAAA
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              8962 31 +     14296 ccaagcttat-gtt---t--ct--t---gtcc-ataaa--atagg
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 220
s Mustela_putorius.JH418006.1                               304384 30 -  14710649 ccacacctaa-gtt---t--c---t---acct-gtaaa--atggg
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     73809 14 -     80779 ----------------------------atcc-gtaag--ataag
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 14 C 0
s Myotis_brandtii.KE162005.1                                284519 30 -  10118263 ccaggcttaa-gtt---t--c---t---atct-gaaaa--atggg
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1591837 30 -   6019432 gcaggcttaa-gtt---t--c---t---atct-gaaaa--atggg
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3907938 30 -   4330536 ccaggtttag-gtt---t--c---t---atct-gaaaa--atggg
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_44643                         2494 30 +     25416 ccaggcttaa-gtt---t--c---t---atct-gaaaa--atggg
i Myotis_myotis.MyoMyo_scaffold_44643                    C 0 C 0
s Nannospalax_galili.KL204047.1                            2040157 31 -   3037898 ccaggcttaa-gtt---t--ct--t---gtct-gggaa--ttaag
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               20573 31 +     21681 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20310181 30 +  31847680 ccacacctaa-gtt---t--c---t---acct-gtgaa--atggg
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5869463 30 +   7148211 ccaggtctaa-gtt---t--c---t---aact-gtaaa--atggg
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    760735 29 +    783361 -tggggctga-gtt---t--c---t---cttg-gtaaa--atggg
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9152929 30 -   9404916 tcagacctaa-gtt---t--c---t---atgt-gtaaa--atggg
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102596013 31 - 196305487 TCATGCCTAA-GTT---T--CT--T---ATCT-ATAAA--ACAGA
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1514628                             1480 31 -      5837 TCATGCCTAA-GTT---T--CT--T---ATCT-ATAAA--ACAGA
i Nycticebus_coucang.k141_1514628                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771935 31 + 199412804 TCATGCCTAA-GTT---T--CT--T---ATCT-ATAAA--ACAGA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1368199 30 +   3988456 CCACACCTAA--TT---T--CA--C---ATCT-TTAAT--GTtgg
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              509006 30 -   2017862 ccacacctaa-att---t--c---t---accc-gtgaa--atggg
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         148179 32 +    630418 ccaggcctca-gtt---t--g-cgt---agct-gta--aaatgag
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          82569 30 -    150152 ccaggcctaa-gtt---t--c---t---aact-gta--aaatgag
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    84485 31 +    102263 CCAGGATTAA-ATG---T--CT--T---GTCC-ATAAA--ATAAG
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2785354 30 -  10937097 ccaggtctaa-gtt---t--c---t---aact-gtaaa--atggg
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_144387              12285  2 -     18566 ------------------------------CT-------------
i Orycteropus_afer.OryAfe_flattened_line_144387          I 14 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       466354 30 -    559221 tcagacctaa-gtt---t--c---t---atgt-gtaaa--atggg
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         7268 31 +      8798 CCATGCCTAA-GTT---T--CT--T---ATCT-ATAAA--ACAGA
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             699507 31 -   1103335 CCATGCCTaa-gtt---t--ct--t---atct-ataaa--acaga
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   17591017 30 +  44047080 ccaggcctaa-ctt---t--c---t---aact-gta--aagtgag
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      179168 30 -    191736 ccaggcctaa-gtt---t--c---t---aact-gta--aagtgag
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    48814 31 +     80009 CGAGGCCTAG-GTT---T--CT--T---ACCT-GTAAA--GCAgg
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03002948.1                             24750 32 +     28717 CGAGGCCTAGCGTT---T--CT--T---ACCT-GTAAA--GCAGG
i Pan_troglodytes.NBAG03002948.1                         C 0 I 459
s Panthera_onca.PanOnc_flattened_line_3271                  154424 30 +    230217 tcagagagaa-gtt---t--c---t---acct-gtaaa--attag
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                267740 30 +  18783137 tcagagagaa-gtt---t--c---t---acct-gtaaa--attag
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4724560 30 -   8748460 tcagacagaa-gtt---t--c---t---acct-gtaaa--attag
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1269898 30 -   2937107 ccaggcctaa-gtt---t--c---t---aact-gtc--aaatgag
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183448744 30 + 183742232 CAAG-CCTag-gtt---t--ct--t---atct-gtaaa--gcagC
i Papio_anubis.CM001495.2                                I 7 C 0
s Papio_cynocephalus.k141_4307930                            12275 31 +     20448 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Papio_cynocephalus.k141_4307930                        I 7 C 0
s Papio_hamadryas.Contig39                                20569086 31 +  20919399 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Papio_hamadryas.Contig39                               I 7 C 0
s Papio_kindae.k141_1936966                                  11032 31 +     41871 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Papio_kindae.k141_1936966                              I 7 C 0
s Papio_papio.k141_802527                                    14310 31 +     27711 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Papio_papio.k141_802527                                I 7 C 0
s Papio_ursinus.k141_5274964                                  5309 31 -     11374 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Papio_ursinus.k141_5274964                             I 7 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15821 29 -     78924 tcagacctaa-gtt---t--c---t---acct-a-aaa--atggg
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1182643                            285 24 -      3244 TTATG--------T---T--CT--T---ATCT-ATAAA--ACAGA
i Perodicticus_ibeanus.k141_1182643                      C 0 C 0
s Perodicticus_potto.k141_1186926                              663 24 +     10374 CTATG--------T---T--CT--T---ATCT-ATAAA--ACAGA
i Perodicticus_potto.k141_1186926                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18215200 31 -  18517816 CCAGGATTAA-ATT---T--CT--T---Gtct-gtaaa--ataag
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_221660                     1234  7 -      2102 gaAGGCC--------------------------------------
i Petromus_typicus.PetTyp_scaffold_221660                C 0 I 3
s Phocoena_phocoena.PhoPho_flattened_line_24159              12425 30 +     63832 ccaggtctaa-gtt---t--c---t---aact-gtaaa--atggg
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            3677 31 +     68526 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        43814 31 +     89929 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            45230 31 +     51399 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14301466 31 -  14605196 CAAGGCCTag-gtt---t--ct--t---atct-gtaaa--gcagC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             5818 30 +     22620 ccaggccaaa-gtt---t--t---t---agct-gtaaa--atggg
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pithecia_albicans.k141_1476471                              7201 31 +     26961 caagacccag-gtt---t--ct--t---atct-gtaaa--gcagg
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          3328 31 +     23417 caagacccag-gtt---t--ct--t---atct-gtaaa--gcagg
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                7193 31 +     29694 caagacccag-gtt---t--ct--t---atct-gtaaa--gcagg
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          32219 31 +     52772 caagacccag-gtt---t--ct--t---atct-gtaaa--gcagg
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           7215 31 +     26198 caagacccag-gtt---t--ct--t---atct-gtaaa--gcagg
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3943745 31 +   4542175 caagacccag-gtt---t--ct--t---atct-gtaaa--gcagg
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            7179 31 -     23490 caagacccag-gtt---t--ct--t---atct-gtaaa--gcagg
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610           1961 30 +      7680 ccaggtctaa-att---t--c---t---aact-gtaaa--atgag
i Platanista_gangetica.PlaMin_flattened_line_173610      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       11446 31 -     39866 caagaccgag-gtt---t--ct--t---atct-gtaaa--gcagg
i Plecturocebus_bernhardi.k141_2549090                   C 0 I 3
s Plecturocebus_brunneus.k141_1495506                        20609 31 +     34906 caagaccgag-gtt---t--ct--t---atct-gtaaa--gcagg
i Plecturocebus_brunneus.k141_1495506                    C 0 I 3
s Plecturocebus_caligatus.k141_1382851                       24871 31 +     87950 cacgaccgag-gtt---t--ct--t---atct-gtaaa--gcagg
i Plecturocebus_caligatus.k141_1382851                   C 0 I 3
s Plecturocebus_cinerascens.k141_1164729                     25698 31 +     88961 caagaccgag-gtt---t--ct--t---atct-gtaaa--gcagg
i Plecturocebus_cinerascens.k141_1164729                 C 0 I 3
s Plecturocebus_cupreus.k141_2351393                         11368 31 +     39403 caagaccgag-gtt---t--ct--t---atct-gtaaa--gcagg
i Plecturocebus_cupreus.k141_2351393                     C 0 I 3
s Plecturocebus_dubius.k141_1058799                          25151 31 -     87928 caagaccgag-gtt---t--ct--t---atct-gtaaa--gcagg
i Plecturocebus_dubius.k141_1058799                      C 0 I 3
s Plecturocebus_grovesi.k141_2013005                         32113 31 +     60166 caagaccgag-gtt---t--ct--t---atct-gtaaa--gcagg
i Plecturocebus_grovesi.k141_2013005                     C 0 I 3
s Plecturocebus_hoffmannsi.k141_3303950                      32309 31 +     67232 caagaccgag-gtt---t--ct--t---atct-gtaaa--gcagg
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 I 3
s Plecturocebus_miltoni.k141_349282                          27782 31 +     90634 caagaccgag-gtt---t--ct--t---atct-gtaaa--gcagg
i Plecturocebus_miltoni.k141_349282                      C 0 I 3
s Plecturocebus_moloch.k141_1031110                          25155 31 -     89403 caagaccgag-gtt---t--ct--t---atct-gtaaa--gcagg
i Plecturocebus_moloch.k141_1031110                      C 0 I 3
s Pongo_abelii.CM009266.2                                189136602 31 + 189387572 CAAGGCCTag-gtt---t--ct--t---atct-gtaaa--gcagg
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9576212 31 +   9816681 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagg
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               78754 31 -     81375 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                             10590 31 +     19060 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_85530                 15804  2 -     22811 ------------------------------GT-------------
i Procavia_capensis.ProCapCap_scaffold_85530             I 14 C 0
s Psammomys_obesus.NESX01036370.1                            15236 19 -     21651 -------------t---t--tt--t---gtct-gtaaa--ataaa
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            18057 29 -     21811 -cagggctaa-gct---t--c---t---ctct-gtaaa--atggg
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_76658          1241 30 -      3818 ccacacctaa-gtt---t--c---t---acct-gtaaa--atggg
i Pteronura_brasiliensis.PteBra_flattened_line_76658     C 0 C 0
s Pteropus_alecto.KB030862.1                              22987454 30 +  28871421 ccaggcctaa-gtt---t--c---t---atct-ataaa--atggc
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1371014 30 +   4952924 ccaggcctaa-gtt---t--c---t---atct-ataaa--atggg
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20277630 30 -  38429054 tcagacagaa-gtt---t--c---t---acct-gtaaa--atcag
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             20567 31 -     91421 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7614692 31 +   7812017 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             20597 31 -     72585 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                 10017 30 +     55207 ccaggcctca-gtt---t--c---t---aact-gta--aaacgag
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53574627 31 +  90668790 CCCAGTTTAA-ATT---T--CT--T---CTCa-gtaaa--ataaa
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        370211 30 -   3329780 ccaggcctaa-gtt---t--c---t---atct-ataaa--atggg
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_1041714                            1160 31 +      5697 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Rhinopithecus_bieti.k119_1041714                       C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91241633 31 - 195417433 CAAGGCCTag-gtt---t--ct--t---atct-gtaaa--gcagC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7677282 31 +   7961872 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_121563                 286 30 +      1157 ccagacctaa-gtt---t--c---t---atct-ataaa--atggg
i Rousettus_aegyptiacus.RouAeg_scaffold_121563           C 0 C 0
s Saguinus_bicolor.k141_8081                                  2927 31 +     42994 CAAGATCTag-gtt---t--ct--t---atct-gtaaa--gcagg
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                             1602 31 +      2253 CAAGAcctag-gtt---t--ct--t---atct-gtaaa--gcagg
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               2051 31 -      8737 CAAGAcctag-gtt---t--ct--t---atct-gtaaa--gcagg
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                              1683 31 +      2343 CAAGAcctag-gtt---t--ct--t---atct-gtaaa--gcagg
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209476584 31 + 209938924 caagacctag-gtt---t--ct--t---atct-gtaaa--gcaag
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                1010 31 -      7576 CAAGAcctag-gtt---t--ct--t---atct-gtaaa--gcagg
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_133311                       2475 30 +      9503 ccaggcctaa-gtt---t--c---t---aact-gta--aaatgag
i Saiga_tatarica.SaiTat_scaffold_133311                  C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119952653 31 - 121099817 CAAGATCTag-gtt---t--ct--t---atct-gtaaa--gcagg
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       24995 31 +     46362 CAAGATCTAG-GTT---T--CT--T---ATCT-GTAAA--GCAGG
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               25090 31 +     45824 CAAGATCTAG-GTT---T--CT--T---ATCT-GTAAA--GCAGG
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             41768 31 -     64574 CAAGATCTAG-GTT---T--CT--T---ATCT-GTAAA--GCAGG
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4842 31 -     23631 CAAGATCTAG-GTT---T--CT--T---ATCT-GTAAA--GCAGG
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 24986 31 -     61129 CAAGATCTAG-GTT---T--CT--T---ATCT-GTAAA--GCAGG
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5422318 31 -   5703754 CAAGACCTAG-GTT---T--CT--T---ATCT-GTTAA--GCAGG
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          57559 31 -     80660 CAAGACCTAG-GTT---T--CT--T---ATCT-GTTAA--GCAGG
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Semnopithecus_entellus.k141_1672505                         5426 31 -     12572 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      32279 31 +     39453 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           12783 31 +     27826 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            12329 31 -     19483 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      5625 31 -     12762 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           5468 31 +     13763 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     4450 29 -     30804 CGAGGATTAA-ATT---T--CT--T---GACT-GA--A--AAAAG
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               5149 30 +   1910179 ccaagccaaa-gtg---t--g---t---atct-gtaaa--atggg
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1957370 31 -   3870691 ctaggcttaa-gtt---t--ct--t---atct-gtaaa--ataag
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             33310 28 +     97271 ccacacct---gtt---t--c---t---acct-gtaaa--atggg
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              21874 30 -    196729 tcagacctag-gtt---t--c---t---acct-gtcaa--atggg
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6814971 30 +  69701581 ccaggcctaa-act---t--t---t---atct-gtaaa--atgga
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                14576 30 +     41958 ccaggcctaa-gtt---t--c---t---atct-gtaaa--atggg
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      122231 30 -    156842 ccaggcctgt-gtt---t--c---t---gtct-gtaaa--atggg
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    390712 30 +    539355 ccaggcctgt-gtt---t--c---t---gtct-gtaaa--atggg
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               29323 31 +     70052 CCAGGCCTAC-ATT---T--CT--T---ATCT-GAAAA--ACAGG
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                4119 31 -     16117 CCAGGCCTAC-ATT---T--CT--T---ATCT-GAAAA--ATAGG
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186433937 31 + 186847797 CAAGGCCTag-gtt---t--ct--t---atct-gtaaa--gcaGC
i Theropithecus_gelada.CM009954.1                        I 7 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              108062  7 +    114563 GCAGGCC--------------------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 3
s Tolypeutes_matacus.TolMat_scaffold_85600                    5731 20 +     18632 ccaggcctaa-att---ttct---t---at---------------
i Tolypeutes_matacus.TolMat_scaffold_85600               C 0 I 1
s Trachypithecus_auratus.k141_722599                         16365 31 -     20410 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      5485 31 -     12674 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       16473 31 +     19930 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      12873 31 -     19997 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            53016 31 -     60166 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        20479 31 -     27529 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                       2107 31 +      9229 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          14006 31 -     21137 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                    2111 31 +      9131 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                         2070 31 -      3730 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        30339 31 +     32220 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5944437 31 +   6242583 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       13694 31 +     20839 caaggcctag-gtt---t--ct--t---atct-gtaaa--gcagc
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    3900 28 +     27266 gcaggcctac-att---t--c---t---aacc-gta----atgag
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Trichechus_manatus.JH594705.1                            4294971  2 +  10818551 ------------------------------TT-------------
i Trichechus_manatus.JH594705.1                          I 30 C 0
s Tupaia_chinensis.KB320699.1                              2166469 27 +   4065304 cttatc-taa-att---t--tg--t---atct-ataaa--at---
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       2838 27 +     70247 cttatc-taa-att---t--tg--t---atct-ataaa--at---
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15741606 30 +  33153633 ccaggtctaa-gtt---t--c---t---aact-gtaaa--atggg
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   57705 30 -     77625 ctaggtctaa-gtg---t--g---t---ataa-gtaaa--atgag
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4852967 30 -   5085361 ccacacctaa-gtt---t--c---t---accc-ataaa--atggg
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 14470 30 -     43706 tcagacctaa-gtt---t--c---t---atgt-gtaaa--atggg
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          4412 31 +    224448 ctaggcttaa-att---t--ct--t---atct-gtaaa--ataag
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      17708 31 +     63895 ccaggcttac-tgt---t--ct--t---gtct-gtaac--ctaag
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_1424488            242 30 -       542 ccaggtctaa-gtt---t--c---t---aact-gtaaa--atggg
i Ziphius_cavirostris.ZipCav_flattened_line_1424488      C 0 C 0
e Cheracebus_torquatus.k141_1170026                          64344 81 +     76511 I
e Cheracebus_regulus.k141_471822                            159875 81 -    216457 I
e Cheracebus_lugens.k141_1393925                              2308 81 +     17877 I
e Cheracebus_lucifer.k141_49986                               2432 81 -     17098 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vicugna_pacos.KN270157.1                                 5374276 47 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Tonatia_saurophila.TonSau_scaffold_294                     83346 714 +    610378 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Sorex_araneus.JH798187.1                                13653314 9235 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    156307 109 -    313613 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                       107181400  0 - 174332312 I
e Ondatra_zibethicus.OndZib_scaffold_7387                      632 3336 +    140218 I
e Octodon_degus.JH651603.1                                  750513 17 +  11899542 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                18000 920 -     19307 I
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184766 1004 -  29670104 I
e Manis_pentadactyla.KN006162.1                              54034 31 -    317179 I
e Manis_javanica.JSZB01003497.1                              21892 31 +    737560 I
e Lepus_americanus.LepAme_scaffold_107385                     5119  0 +     14121 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Heterocephalus_glaber.JH602082.1                        20664195 469 +  22651954 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    39057 4687 +     67921 I
e Desmodus_rotundus.KZ672289.1                             8632254 708 +  20541912 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    839213  0 +   1526836 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1255607 4808 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Carollia_perspicillata.CarPer_scaffold_92756                7250 707 -     11696 I
e Camelus_ferus.KB017975.1                                  405530 47 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2337232 47 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10004760 47 -  17673402 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6909 705 +     43469 I
e Anoura_caudifer.AnoCau_scaffold_1412                      187499 706 +    412891 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      11497 12 +     62944 Gat-a-a---t------a-ata--a-----t
s Acinonyx_jubatus.LLWD01001279.1                           835268  5 -   1699592 g-t-a-a---t--------------------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     74706 10 +     87051 --T-A-A---T------A-AT--AA-----T
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 8 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9513216  6 -  29979442 gat-a-a---t--------------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             82121  6 -    347723 gat-a-a---t--------------------
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     76240  8 -     89534 ------A---A------G-AT--AA-----C
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   20094 12 -     52922 gat-a-a---t------a-ata--A-----T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         20025 12 -     28001 gat-a-a---t------a-ata--a-----t
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                         10512 12 -     18505 gat-a-a---t------a-atc--a-----t
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                          11377 12 -     12518 gat-a-a---t------a-atc--a-----t
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             11716 12 +     51355 gat-a-a---t------a-ata--a-----t
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                4827 12 -     36483 gat-a-a---t------a-ata--a-----t
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              15279 12 +     28687 gat-a-a---t------a-ata--a-----t
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 3752 12 +     27940 gat-a-a---t------a-ata--a-----t
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            4840 12 -      9457 gat-a-a---t------a-ata--a-----t
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             3798 12 +     30492 gat-a-a---t------a-ata--a-----t
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              8019 12 +     47717 gat-a-a---t------a-ata--a-----t
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              4520 12 +      5663 gat-a-a---t------a-ata--a-----t
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             18971 12 +     50774 gat-a-a---t------a-ata--a-----t
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          680929  9 -   2318259 gat-a-ataat--------------------
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303              2199  6 -     32520 gat-a-a---t--------------------
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 C 0
s Aotus_azarae.k141_3104676                                  17512 12 -     33861 gat-a-a---t------a-atg--a-----t
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            17510 12 -     34016 GAT-A-A---T------A-ATG--A-----T
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299937 12 -   5030052 GAT-A-A---T------A-ATG--A-----T
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             17546 12 -     34685 gat-a-a---t------a-atg--a-----t
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               30670 12 -     47192 gat-a-a---t------a-atg--a-----t
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      15934  1 +     20879 ------------------------------T
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_1648548                         628 12 +      5281 AGT-A-A---C------A-CTA--A-----T
i Arctocebus_calabarensis.k141_1648548                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21212198 12 -  21539123 gat-a-a---t------a-ata--a-----t
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               46997 12 -     48001 gat-a-a---t------a-ata--a-----t
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 29798 12 -     30947 gat-a-a---t------a-ata--a-----t
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               11573 12 -     89868 gat-a-a---t------a-ata--a-----t
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              15955 12 -     40414 gat-a-a---t------a-ata--a-----t
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                23843 12 +     72325 gat-a-a---t------a-ata--a-----t
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15195269  9 +  23207421 gat-a-ataat--------------------
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         5734  9 -     18090 gat-a-ataat--------------------
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    32009  9 +     34529 gat-a-ataat--------------------
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    204644  9 -    288883 gat-a-ataag--------------------
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20277881  9 +  48749331 gat-n-ataag--------------------
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1130435  9 -   1948126 gat-a-ataag--------------------
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18088519  9 +  45695690 gat-a-ataag--------------------
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2824471  9 +   4408762 gat-a-ataag--------------------
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                104832 12 -    122966 gat-a-a---t------a-ata--a-----t
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   64335 12 +     81800 gat-a-a---t------a-ata--a-----t
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  33517 12 -     95584 gat-a-a---t------a-ata--a-----t
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         57617 12 -    119600 gat-a-a---t------a-ata--a-----t
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_10318                               1274 12 +     27907 gat-a-a---t------a-ata--a-----t
i Callibella_humilis.k141_10318                          C 0 C 0
s Callimico_goeldii.k141_737284                                914 12 -     31217 gat-a-a---t------a-ata--a-----t
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                             1210 12 +      5377 gat-a-a---t------a-ata--a-----t
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23593071 12 - 189096842 GAT-A-A---T------A-ATA--A-----T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1885 12 -     12329 gat-a-a---t------a-ata--a-----t
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s CanFam4.chr16                                           17802885  6 -  60362399 gat-a-a---t--------------------
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     3631  6 -     43241 gat-a-a---t--------------------
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9038326  6 -   9314153 gat-a-a---t--------------------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17962802  6 -  59632846 gat-a-a---t--------------------
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18504099  6 +  63665305 gat-a-a---t--------------------
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18834954  9 +  46296322 gat-a-ataat--------------------
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18065755  9 -  44709034 gat-a-ataat--------------------
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    3646 16 -     12242 aat-a-a---t------g-at---agagtat
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           158856 12 -    496798 GAT-A-A---T------G-ATA--A-----C
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    140342 12 +    179628 gat-a-a---t------a-aa--at-----t
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     97406  9 +    217609 ggt-a-ataat--------------------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18352227 11 -  23392119 aat-a-a---t------g-at---a-----g
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18364487 11 -  23407841 aat-a-a---t------g-at---a-----g
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                       103369 11 +    143979 aat-a-a---t------g-at---a-----g
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cebuella_pygmaea.k141_793006                                 911 12 -     15088 gat-a-a---t------a-ata--a-----t
i Cebuella_pygmaea.k141_793006                           C 0 C 0
s Cebus_albifrons.Contig27                                25654391 12 +  26074798 gat-g-a---t------a-ata--a-----t
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                2329 12 +     28840 GAT-G-A---T------A-ATA--A-----T
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 2058 12 +     14051 GAT-G-A---T------A-ATA--A-----T
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         8660 12 +     31688 gat-a-a---t------g-ata--a-----c
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12234947  9 +  27778364 gat-a-ataat--------------------
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5970  9 -     25243 gat-a-ataat--------------------
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4481037 12 +   4669795 GAT-A-A---T------A-ATA--A-----T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        5538 12 +     17872 gat-a-a---t------a-ata--a-----t
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           6126 12 -     14043 gat-a-a---t------a-ata--a-----t
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          14225 12 +     27781 gat-a-a---t------a-ata--a-----t
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        14390 12 -     20310 gat-a-g---t------a-ata--a-----t
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          17363 12 +     29689 gac-a-g---t------a-ata--a-----t
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           12122 12 -     20078 gat-a-a---t------a-atc--a-----t
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          20036 12 -     27936 gat-a-a---t------a-ata--A-----T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            8909 12 -     17152 gat-a-a---t------a-ata--a-----t
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38828636 12 +  39242232 gat-a-a---t------a-ata--a-----t
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21228141 12 -  21565898 gat-a-a---t------a-ata--a-----t
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       45253 12 -     53127 gat-a-a---t------a-ata--a-----t
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        5514 12 +     13442 gat-a-a---t------a-ata--a-----t
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       20056 12 -     27947 gat-g-a---t------a-ata--a-----t
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         3084 12 +     10558 gat-a-a---t------a-ata--a-----t
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          6087 12 +     14005 gat-a-a---t------a-atc--a-----t
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chiropotes_albinasus.k141_2206961                           2693 12 -     15524 gat-a-a---t------a-ata--a-----t
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chiropotes_israelita.k141_747660                          101960 12 +    146308 gat-a-a---t------a-ata--a-----t
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          33767 12 -     50570 gat-a-a---t------a-ata--a-----t
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18433959 12 -  18827391 gat-a-a---t------a-atc--a-----t
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       20455 12 -     50209 gat-a-a---t------a-atc--a-----t
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135427461 12 + 135778131 GAT-A-A---T------A-ATC--A-----T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1915997 12 +   2368649 AAT-A-A---T------C-ATC--A-----T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199954238 12 + 200372422 aat-a-a---t------c-atc--a-----t
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              42547 12 +     84244 AAT-A-A---T------C-ATC--A-----T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17552910  3 -  53390261 gat----------------------------
i Condylura_cristata.JH655891.1                          C 0 I 2
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           4123  4 +     23735 tag-a--------------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 54183 12 +     63868 aat-g-a---t------a-at--aa-----c
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11669706 12 + 224834208 gac-a-a---t------a-at--aa-----t
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               6970  6 -     19598 GAG-A-A---C--------------------
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             31819  6 -     87169 gat-a-a---t--------------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  38571 11 +     51376 gtt-a-a---t------g-at---a-----g
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 18 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900             3194 11 -     75252 aat-a-a---t------g-at---a-----g
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 18 C 0
s Delphinapterus_leucas.KZ290073.1                        16815144  9 +  35494412 gat-a-gtaat--------------------
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  676789  9 +   1390856 gat-a-ataat--------------------
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    9549  9 +    198055 gat-a-ataat--------------------
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 35921 11 -     42551 gat-a-a---t------g-at---a-----g
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE797349.1                                   1037  4 -     31197 gat-a--------------------------
i Eidolon_helvum.KE797349.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       315411  9 +    607251 gat-a-ataat--------------------
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          25066 12 -    110024 GAC-A-A---C------A-AC--CA-----T
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                            4996 12 +      8657 gac-a-a---c------a-at--ca-----t
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16339338  6 -  41312741 gat-a-a---t--------------------
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2151052  6 -  14770903 gat-a-a---c--------------------
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1287083  9 +   4378816 gat-a-ataat--------------------
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18534891  9 -  39960074 gat-a-ataat--------------------
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               36920  9 +    498745 gat-a-ataat--------------------
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21210631 12 -  21539334 gat-c-a---t------a-atc--a-----t
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           14567  9 +    133382 gat-a-ataat--------------------
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             28516  4 -     44125 gat-t--------------------------
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 I 2
s Felis_catus.CM001381.2                                  20240400  5 + 206538554 g-t-a-a---t--------------------
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20199271  5 + 205367284 g-t-a-a---t--------------------
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 12932  5 -     36744 g-t-a-a---t--------------------
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             853002 11 +   3816255 ggt-a-a---t------a-at---a-----a
i Fukomys_damarensis.KN121974.1                          C 0 I 1
s Galago_moholi.ctg2040                                     429807 12 -    453645 AAT-A-A---C------A-CTA--A-----T
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             7497 12 +     11339 AAT-A-A---C------A-CTA--A-----T
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            4786 12 +     41679 AAT-A-A---C------A-CTA--A-----T
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               6031 12 -      9135 gat-a-a---t------a-ata--a-----t
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     612653  9 -    660261 gat-a-ataat--------------------
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            35745 12 +     49224 aat-a-a---t------a-at--ga-----t
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              20723 12 -     32273 gat-a-a---t------a-ata--a-----t
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186342858 12 + 186649187 gat-a-a---t------a-ata--a-----t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   37368 12 +     78134 aat-a-a---t------a-at--ga-----t
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               245630  6 +    327341 gat-a-a---t--------------------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 23248  9 +     36099 gat-a-ataat--------------------
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               113989  9 +    128679 gat-a-ataat--------------------
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       113793  4 +   1711038 cat-a--------------------------
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188               2359  4 +      9903 tat-a--------------------------
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 C 0
s Hoolock_leuconedys.ctg274                                    440309 12 +    630532 gat-a-a---t------a-ata--a-----t
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            27315 11 -    143317 aat-a-a---t------t-at---a-----g
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      85474 12 +    135385 gat-g-a---t------a-at---a-a---t
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7525517  8 -   7955117 aat-a-a---c------a-a-----------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 1
s Inia_geoffrensis.IniGeo_flattened_line_34779                2351  9 -     31341 gat-a-ataat--------------------
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8278991  8 -   9596543 ------A---A------G-AT--AA-----C
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                 2090  9 -     18011 gat-a-ataat--------------------
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         18014 12 -     38430 gat-a-a---t------a-ata--a-----t
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    20706  6 -     42476 ggt-a-a---c--------------------
i Lasiurus_borealis.LasBor_scaffold_32767                I 275 C 0
s Leontocebus_fuscicollis.k141_1820339                        9649 12 +     64341 gat-a-g---t------a-ata--a-----t
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           1991 12 -     35062 aat-a-g---t------a-ata--a-----t
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        9678 12 +     35603 gat-a-g---t------a-ata--a-----t
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    31294 12 +     38576 gat-a-a---t------a-ata--a-----t
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         27998 12 +     66356 gat-a-a---t------a-ata--a-----t
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3059271  6 +   3914936 gat-a-a---t--------------------
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             271622  9 -    662738 gat-a-ataat--------------------
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1442586 12 +   1826925 aat-a-a---t------a-ata--a-----t
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_399337                            17829 12 -     33856 AAT-A-A---C------A-CTA--A-----T
i Loris_lydekkerianus.k141_399337                        C 0 C 0
s Loris_tardigradus.ctg83                                  1015540 12 +   6120653 AAT-A-A---C------A-CTA--A-----T
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17959042  6 -  59628241 gat-a-a---t--------------------
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                              12397 12 +     40492 gat-a-a---t------a-ata--a-----t
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59681651  5 +  60120075 -------------------ata--a-----t
i Macaca_assamensis.Contig5                              I 4 C 0
s Macaca_cyclopis.k119_18836                                 18193 12 -     26193 gat-a-a---t------a-ata--a-----t
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            85968 12 -    114318 gat-a-a---t------a-ata--a-----t
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 11659 12 -     23192 gat-a-a---t------a-ata--a-----t
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                21124 12 -     29190 gat-a-a---t------a-ata--a-----t
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  29703 12 +     37952 gat-a-a---t------a-ata--a-----t
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186844776 12 + 187317192 GAT-A-A---T------A-ATA--A-----T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25463357 12 -  25927173 GAT-A-A---T------A-ATA--A-----T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  85561 12 +     89720 gat-a-a---t------a-ata--a-----t
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                12573 12 +     20474 gat-a-a---t------a-ata--a-----t
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  12347 12 -     14993 gat-a-a---t------a-ata--a-----t
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  335210 12 -    668171 gat-a-a---t------a-ata--a-----t
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                10641  5 -     24072 -------------------ata--a-----t
i Macaca_thibetana.k99_256239                            I 4 C 0
s Macaca_tonkeana.k141_1498238                               31268 12 -     45290 gat-a-a---t------a-ata--a-----t
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                  6079  4 +    270270 gat-a--------------------------
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23942859 12 -  24302211 gat-a-a---t------a-ata--A-----T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356967 12 +    752769 gat-a-a---t------a-ata--a-----t
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33106600  8 -  40650429 aat-a-a---c------a-a-----------
i Marmota_marmota.CZRN01000018.1                         C 0 I 1
s Megaderma_lyra.MegLyr_scaffold_4542                        16647  4 -    207569 tag-a--------------------------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             12916  6 +     13704 gat-a-a---t--------------------
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 37649 12 +    140813 gac-a-g---t------g-at--aa-----t
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    6783  9 +     10310 gat-a-ataat--------------------
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Mico_argentatus.k141_1024458                                 910 12 -     20047 gat-a-a---t------a-ata--a-----t
i Mico_argentatus.k141_1024458                           C 0 C 0
s Mico_humeralifer.k141_1346949                               1323 12 +      1399 gat-a-a---t------a-ata--a-----t
i Mico_humeralifer.k141_1346949                          C 0 C 0
s Mico_schneideri.k141_916733                                        910 12 +      5107 gat-a-a---t------a-ata--a-----t
i Mico_schneideri.k141_916733                                  C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1853825  5 +   8254450 g-t-a-a---c--------------------
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             37503  5 +     64694 g-t-a-a---c--------------------
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                          14539 12 -     28506 gat-a-a---t------a-ata--A-----T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_55178          440  6 +     26817 gat-a-a---t--------------------
i Mirounga_angustirostris.MirAng_flattened_line_55178    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    30528  9 -    437263 gat-a-gtaat--------------------
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 144535  6 -    366855 gat-a-a---c--------------------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   4835  9 +     82753 gat-a-ataat--------------------
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_40893                     637  6 +      5729 gat-a-a---t--------------------
i Mungos_mungo.MunMun_flattened_line_40893               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                          11067  6 +     14753 gat-a-a---c--------------------
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84365242 12 - 120012414 GAC-A-A---T------G-GG--AA-----T
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87654646 12 - 129401213 GAC-A-A---T------G-GA--AA-----T
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31359349 12 -  89631738 gac-a-a---t------g-ga--AA-----T
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90757433 12 - 130317789 GAC-A-A---T------G-GA--AA-----T
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              9213 12 +     14296 aat-c-a---t------a-at--ga-----t
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 220 C 0
s Mustela_putorius.JH418006.1                               304414  6 -  14710649 gat-a-a---t--------------------
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     73823 16 -     80779 gat-a-a---t------g-at---agagtag
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                284549  6 -  10118263 gat-a-a---c--------------------
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1591867  6 -   6019432 gat-a-a---c--------------------
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3907968  6 -   4330536 gat-a-a---c--------------------
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_44643                         2524  6 +     25416 gat-a-a---c--------------------
i Myotis_myotis.MyoMyo_scaffold_44643                    C 0 C 0
s Nannospalax_galili.KL204047.1                            2040188 12 -   3037898 gac-a-g---t------a-at--aa-----t
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               20604 12 +     21681 gat-a-a---t------a-ata--a-----t
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20310211  6 +  31847680 gat-a-a---t--------------------
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5869493  9 +   7148211 gat-a-gtaat--------------------
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    760764  6 +    783361 gat-a-a---c--------------------
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9152959  6 -   9404916 gat-a-a---t--------------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102596044 12 - 196305487 AAT-A-A---C------A-CTA--A-----T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1514628                             1511 12 -      5837 AAT-A-A---C------A-CTA--A-----T
i Nycticebus_coucang.k141_1514628                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771966 12 + 199412804 AAT-A-A---C------A-CTA--A-----T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1368229 13 +   3988456 gatga-a---a------a-aaa--a-----t
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              509036  6 -   2017862 gat-a-a---t--------------------
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         148211  9 +    630418 gat-a-ataat--------------------
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          82599  9 -    150152 gat-a-ataat--------------------
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    84516 12 +    102263 AAC-A-A---G------A-AT--AA-----T
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2785384  9 -  10937097 gat-a-ataat--------------------
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       466384  6 -    559221 gat-a-a---t--------------------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         7299 12 +      8798 AAT-A-A---C------A-CTA--A-----T
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             699538 12 -   1103335 aat-a-a---c------a-ctA--A-----T
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   17591047  9 +  44047080 gat-a-acaat--------------------
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      179198  9 -    191736 gat-a-gtaat--------------------
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    48845 12 +     80009 gat-a-a---t------a-ata--a-----t
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189147714 12 + 189151597 gat-a-a---t------a-ata--a-----t
i Pan_troglodytes.CM009242.2                             I 121 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  154454  5 +    230217 g-t-a-a---t--------------------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                267770  5 +  18783137 g-t-a-a---t--------------------
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4724590  5 -   8748460 g-t-a-a---t--------------------
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1269928  9 -   2937107 gat-a-ataat--------------------
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183448774 18 + 183742232 GAT-A-A---TCGAATCA-ATA--C-----T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            12306 12 +     20448 gat-a-a---t------a-ata--a-----t
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20569117 12 +  20919399 gat-a-a---t------a-ata--a-----t
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                  11063 12 +     41871 gat-a-a---t------a-ata--a-----t
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    14341 12 +     27711 gat-a-a---t------a-ata--a-----t
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  5340 12 -     11374 gat-a-a---t------a-ata--a-----t
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15850  6 -     78924 gat-a-c---t--------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1182643                            309 12 -      3244 AGT-A-A---C------A-CTA--A-----T
i Perodicticus_ibeanus.k141_1182643                      C 0 C 0
s Perodicticus_potto.k141_1186926                              687 12 +     10374 AGT-A-A---C------A-CTA--A-----T
i Perodicticus_potto.k141_1186926                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18215231  8 -  18517816 aat-a-a---t------a-a-----------
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_221660                     1244 11 -      2102 GAT-A-A---T------A-AT---A-----A
i Petromus_typicus.PetTyp_scaffold_221660                I 3 I 1
s Phocoena_phocoena.PhoPho_flattened_line_24159              12455  9 +     63832 gat-a-ttaat--------------------
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            3708 12 +     68526 gat-a-a---t------a-ata--a-----t
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        43845 12 +     89929 gat-a-a---t------a-ata--a-----t
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            45261 12 +     51399 gat-a-a---t------a-ata--a-----t
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14301497 12 -  14605196 GAT-A-A---T------A-ATA--A-----T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             5848  6 +     22620 gat-a-a---c--------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pithecia_albicans.k141_1476471                              7232 12 +     26961 gat-a-a---t------g-ata--a-----t
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          3359 12 +     23417 gat-a-a---t------g-ata--a-----t
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                7224 12 +     29694 gat-a-a---t------g-ata--a-----t
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          32250 12 +     52772 gat-a-a---t------g-ata--a-----t
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           7246 12 +     26198 gat-a-a---t------g-ata--a-----t
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3943776 12 +   4542175 gat-a-a---t------g-ata--a-----t
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            7210 12 -     23490 gat-a-a---t------g-ata--a-----t
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610           1991  9 +      7680 gat-a-ataat--------------------
i Platanista_gangetica.PlaMin_flattened_line_173610      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       11480  8 -     39866 ------a---t------a-ata--a-----t
i Plecturocebus_bernhardi.k141_2549090                   I 3 C 0
s Plecturocebus_brunneus.k141_1495506                        20643  8 +     34906 ------a---t------a-ata--a-----t
i Plecturocebus_brunneus.k141_1495506                    I 3 C 0
s Plecturocebus_caligatus.k141_1382851                       24905  8 +     87950 ------a---t------a-ata--a-----t
i Plecturocebus_caligatus.k141_1382851                   I 3 C 0
s Plecturocebus_cinerascens.k141_1164729                     25732  8 +     88961 ------a---t------a-ata--a-----t
i Plecturocebus_cinerascens.k141_1164729                 I 3 C 0
s Plecturocebus_cupreus.k141_2351393                         11402  8 +     39403 ------a---t------a-ata--a-----t
i Plecturocebus_cupreus.k141_2351393                     I 3 C 0
s Plecturocebus_dubius.k141_1058799                          25185  8 -     87928 ------a---t------a-ata--a-----t
i Plecturocebus_dubius.k141_1058799                      I 3 C 0
s Plecturocebus_grovesi.k141_2013005                         32147  8 +     60166 ------a---t------a-ata--a-----t
i Plecturocebus_grovesi.k141_2013005                     I 3 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      32343  8 +     67232 ------a---t------a-ata--a-----t
i Plecturocebus_hoffmannsi.k141_3303950                  I 3 C 0
s Plecturocebus_miltoni.k141_349282                          27816  8 +     90634 ------a---t------a-ata--a-----t
i Plecturocebus_miltoni.k141_349282                      I 3 C 0
s Plecturocebus_moloch.k141_1031110                          25189  8 -     89403 ------a---t------a-ata--a-----t
i Plecturocebus_moloch.k141_1031110                      I 3 C 0
s Pongo_abelii.CM009266.2                                189136633 12 + 189387572 ggt-a-a---t------a-ata--a-----t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9576243 12 +   9816681 ggt-a-a---t------a-ata--a-----t
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               78785 12 -     81375 gat-a-a---t------a-ata--a-----t
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                             10621 12 +     19060 gat-a-a---t------a-ata--a-----t
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            15255 12 -     21651 gac-a-g---t------g-at--aa-----t
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            18086  7 -     21811 gat-aaa---c--------------------
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_76658          1271  6 -      3818 gat-a-a---t--------------------
i Pteronura_brasiliensis.PteBra_flattened_line_76658     C 0 C 0
s Pteropus_alecto.KB030862.1                              22987484  4 +  28871421 gat-a--------------------------
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1371044  4 +   4952924 gat-a--------------------------
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20277660  5 -  38429054 g-t-a-a---t--------------------
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             20598 12 -     91421 gat-a-a---t------a-ata--a-----t
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7614723 12 +   7812017 gat-a-a---t------a-ata--a-----t
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             20628 12 -     72585 gat-a-a---t------a-ata--a-----t
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                 10047  9 +     55207 gat-a-ataat--------------------
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53574658 12 +  90668790 gac-a-a---t------g-aa--AA-----T
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        370241  4 -   3329780 cat-a--------------------------
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_1041714                            1191 12 +      5697 gat-a-a---t------a-ata--a-----t
i Rhinopithecus_bieti.k119_1041714                       C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91241664 12 - 195417433 GAT-A-A---T------A-ATA--A-----T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7677313 12 +   7961872 gat-a-a---t------a-ata--a-----t
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_121563                 316  4 +      1157 gat-a--------------------------
i Rousettus_aegyptiacus.RouAeg_scaffold_121563           C 0 C 0
s Saguinus_bicolor.k141_8081                                  2958 12 +     42994 gat-a-a---t------a-ata--a-----t
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                             1633 12 +      2253 gaa-a-a---t------a-ata--a-----t
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               2082 12 -      8737 gaa-a-a---t------a-ata--a-----t
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                              1714 12 +      2343 gaa-a-a---t------a-ata--a-----t
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209476615 12 + 209938924 gat-a-a---t------a-ata--a-----t
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                1041 12 -      7576 gaa-a-a---t------a-ata--a-----t
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_133311                       2505  9 +      9503 gat-a-ataat--------------------
i Saiga_tatarica.SaiTat_scaffold_133311                  C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119952684 12 - 121099817 aat-a-a---t------a-ata--a-----t
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       25026 12 +     46362 AAT-A-A---T------A-ATA--A-----T
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               25121 12 +     45824 AAT-A-A---T------A-ATA--A-----T
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             41799 12 -     64574 AAT-A-A---T------A-ATA--A-----T
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4873 12 -     23631 AAT-A-A---T------A-ATA--A-----T
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 25017 12 -     61129 AAT-A-A---T------A-ATA--A-----T
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5422349 12 -   5703754 GAT-G-A---T------A-ATA--A-----T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          57590 12 -     80660 GAT-G-A---T------A-ATA--A-----T
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Semnopithecus_entellus.k141_1672505                         5457 12 -     12572 gat-a-a---t------a-ata--a-----t
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      32310 12 +     39453 gat-a-a---t------a-ata--a-----t
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           12814 12 +     27826 gat-a-a---t------a-ata--a-----t
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            12360 12 -     19483 gat-a-a---t------a-ata--a-----t
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      5656 12 -     12762 gat-a-a---t------a-ata--a-----t
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           5499 12 +     13763 gat-a-a---t------a-ata--a-----t
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     4479 13 -     30804 GGC-A-A---T------A-GT-GAA-----T
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               5179  6 +   1910179 gat-a-g---t--------------------
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1957401  8 -   3870691 aat-a-a---c------a-a-----------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 1
s Spilogale_gracilis.SpiGra_flattened_line_13525             33338  6 +     97271 gat-a-a---t--------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              21904  6 -    196729 gat-a-a---t--------------------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6815001  9 +  69701581 gaa-a-ataat--------------------
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                14606  6 +     41958 gat-a-a---c--------------------
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      122261  9 -    156842 gat-a-ataat--------------------
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    390742  9 +    539355 gat-a-ataat--------------------
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               29354 12 +     70052 GAG-A-A---T------G-ATA--A-----C
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                4150 12 -     16117 GAG-A-A---T------G-ATA--A-----C
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186433968 12 + 186847797 GAT-A-A---T------A-ATA--A-----T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              108072 11 +    114563 GAT-A-A---C------G-AC---A-----A
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 3 I 1
s Trachypithecus_auratus.k141_722599                         16396 12 -     20410 gat-a-a---t------a-ata--a-----t
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      5516 12 -     12674 gat-a-a---t------a-ata--a-----t
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       16504 12 +     19930 gat-a-a---t------a-ata--a-----t
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      12904 12 -     19997 gat-a-a---t------a-ata--a-----t
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            53047 12 -     60166 gat-a-a---t------a-ata--a-----t
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        20510 12 -     27529 gat-a-a---t------a-ata--a-----t
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                       2138 12 +      9229 gat-a-a---t------a-ata--a-----t
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          14037 12 -     21137 gat-a-a---t------a-ata--a-----t
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                    2142 12 +      9131 gat-a-a---t------a-ata--a-----t
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                         2101 12 -      3730 gat-a-a---t------a-ata--a-----t
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        30370 12 +     32220 gat-a-a---t------a-ata--a-----t
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5944468 12 +   6242583 gat-a-a---t------a-ata--a-----t
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       13725 12 +     20839 gat-a-a---t------a-ata--a-----t
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              2166496  6 +   4065304 -----------------a-ata--a-----t
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       2865  6 +     70247 -----------------a-ata--a-----t
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    3928  9 +     27266 gat-a-atagt--------------------
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15741636  9 +  33153633 gat-a-ataat--------------------
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   57735  6 -     77625 aac-a-a---t--------------------
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4852997  6 -   5085361 gat-a-a---t--------------------
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 14500  6 -     43706 gat-a-a---t--------------------
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          4443  8 +    224448 aat-a-a---t------a-a-----------
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 1
s Zapus_hudsonius.ZapHud_scaffold_11398                      17739 12 +     63895 gaa-a-a---a------a-at--aa-----c
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_1424488            272  9 -       542 gat-a-ataat--------------------
i Ziphius_cavirostris.ZipCav_flattened_line_1424488      C 0 C 0
e Cheracebus_torquatus.k141_1170026                          64344 81 +     76511 I
e Cheracebus_regulus.k141_471822                            159875 81 -    216457 I
e Cheracebus_lugens.k141_1393925                              2308 81 +     17877 I
e Cheracebus_lucifer.k141_49986                               2432 81 -     17098 I
e Echinops_telfairi.JH980293.1                            48781896  0 + 111700974 C
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1494  0 +      4343 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vicugna_pacos.KN270157.1                                 5374276 47 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294973  0 +  10818551 C
e Tonatia_saurophila.TonSau_scaffold_294                     83346 714 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_85600                    5751  1 +     18632 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Sorex_araneus.JH798187.1                                13653314 9235 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    156307 109 -    313613 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15806  0 -     22811 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                       107181400  0 - 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12287  0 -     18566 C
e Ondatra_zibethicus.OndZib_scaffold_7387                      632 3336 +    140218 I
e Octodon_degus.JH651603.1                                  750513 17 +  11899542 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                18000 920 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24609  0 -    145209 C
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184766 1004 -  29670104 I
e Manis_pentadactyla.KN006162.1                              54034 31 -    317179 I
e Manis_javanica.JSZB01003497.1                              21892 31 +    737560 I
e Loxodonta_africana.GL010049.1                            4219685  0 -  43346337 C
e Lepus_americanus.LepAme_scaffold_107385                     5119  0 +     14121 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hyaena_hyaena.HyaHya_flattened_line_26932                  48596  0 +     55795 C
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3353  0 +      7595 C
e Heterocephalus_glaber.JH602082.1                        20664195 469 +  22651954 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    39057 4687 +     67921 I
e Desmodus_rotundus.KZ672289.1                             8632254 708 +  20541912 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            70652  1 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    839213  0 +   1526836 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1255607 4808 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            7648  1 -      8501 I
e Carollia_perspicillata.CarPer_scaffold_92756                7250 707 -     11696 I
e Camelus_ferus.KB017975.1                                  405530 47 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2337232 47 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10004760 47 -  17673402 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6909 705 +     43469 I
e Anoura_caudifer.AnoCau_scaffold_1412                      187499 706 +    412891 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      11509 13 +     62944 cataac---ga--------------cctcg
s Acinonyx_jubatus.LLWD01001279.1                           835273  6 -   1699592 ----ac---ta--------------cc---
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     74716  9 +     87051 CATGTT---TT--------------C----
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 I 1
s Ailuropoda_melanoleuca.LNAT01000098.1                    9513222  6 -  29979442 ----tc---ta--------------cc---
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             82127  6 -    347723 ----tc---ta--------------ct---
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     76248  9 -     89534 CATGCA---CA--------------C----
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 I 1
s Allenopithecus_nigroviridis.k141_3361533                   20106  9 -     52922 C-TAAC---AA--------------CC---
i Allenopithecus_nigroviridis.k141_3361533               C 0 I 1
s Allochrocebus_lhoesti.k141_4309873                         20037  8 -     28001 c-taac---aa---------------c---
i Allochrocebus_lhoesti.k141_4309873                     C 0 I 1
s Allochrocebus_preussi.k141_1442296                         10524  8 -     18505 c-taAC---AA---------------C---
i Allochrocebus_preussi.k141_1442296                     C 0 I 1
s Allochrocebus_solatus.k141_166128                          11389  9 -     12518 c-taac---aa--------------cc---
i Allochrocebus_solatus.k141_166128                      C 0 I 1
s Alouatta_belzebul.k141_3560514                             11728 10 +     51355 cataac---ag--------------cc---
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                4839 10 -     36483 cataac---ag--------------cc---
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              15291 10 +     28687 cataac---ag--------------cc---
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 3764 10 +     27940 cataac---ag--------------cc---
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            4852 10 -      9457 cctaac---ag--------------cc---
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             3810 10 +     30492 cataac---ag--------------cc---
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              8031 10 +     47717 cataac---ag--------------cc---
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              4532 10 +      5663 cataac---ag--------------cc---
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             18983 10 +     50774 cataac---ag--------------cc---
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          680938  7 -   2318259 ---aac---ta--------------ct---
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303              2205  7 -     32520 ---aac---ta--------------ca---
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 C 0
s Aotus_azarae.k141_3104676                                  17524 10 -     33861 cataac---aa--------------cc---
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            17522 10 -     34016 CATAAC---AA--------------TC---
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299949 10 -   5030052 CATAAC---AA--------------CC---
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             17558 10 -     34685 cataac---aa--------------cc---
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               30682 10 -     47192 cataac---aa--------------cc---
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      15935  9 +     20879 CATAAC---TA--------------C----
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 I 1
s Arctocebus_calabarensis.k141_1648548                         640 10 +      5281 TATAAC---TA--------------CT---
i Arctocebus_calabarensis.k141_1648548                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21212210 10 -  21539123 cataac---ag--------------cc---
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               47009 10 -     48001 cataac---ag--------------cc---
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 29810 10 -     30947 cataac---ag--------------cc---
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               11585 10 -     89868 cataac---ag--------------cc---
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              15967 10 -     40414 cataac---ag--------------cc---
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                23855 10 +     72325 cataac---ag--------------cc---
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15195278  7 +  23207421 ---aac---ta--------------ct---
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         5743  7 -     18090 ---aac---ta--------------ct---
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    32018  7 +     34529 ---aac---ta--------------ct---
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    204653  7 -    288883 ---aac---ta--------------ct---
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20277890  7 +  48749331 ---aac---ta--------------ct---
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1130444  7 -   1948126 ---aac---ta--------------ct---
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18088528  7 +  45695690 ---aac---ta--------------ct---
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2824480  7 +   4408762 ---aac---ta--------------ct---
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                104844 10 -    122966 cataac---aa--------------cc---
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   64347 10 +     81800 cataac---aa--------------cc---
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  33529 10 -     95584 cataac---aa--------------cc---
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         57629 10 -    119600 cataac---aa--------------cc---
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_10318                               1286 10 +     27907 cataac---aa--------------cc---
i Callibella_humilis.k141_10318                          C 0 C 0
s Callimico_goeldii.k141_737284                                926 10 -     31217 cataac---aa--------------cc---
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                             1222 10 +      5377 cataac---aa--------------cc---
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23593083 10 - 189096842 CATAAC---AA--------------CC---
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1897 10 -     12329 cataac---aa--------------cc---
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s CanFam4.chr16                                           17802891  6 -  60362399 ----ac---ta--------------cc---
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     3637  6 -     43241 ----ac---ta--------------cc---
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9038332  6 -   9314153 ----ac---ta--------------cc---
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17962808  6 -  59632846 ----ac---ta--------------cc---
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18504105  6 +  63665305 ----ac---ta--------------cc---
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18834963  7 +  46296322 ---aac---ta--------------ct---
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18065764  7 -  44709034 ---aac---ta--------------ct---
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    3662  7 -     12242 aatatc---t--------------------
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 10
s Carlito_syrichta.NW_007259797.1                           158868 10 -    496798 CACAGC---TA--------------CA---
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    140354  9 +    179628 catact---ta--------------c----
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 1
s Catagonus_wagneri.CatWag_scaffold_2839                     97415  7 +    217609 ---aat---tc--------------ct---
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18352238  7 -  23392119 catatc---t--------------------
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18364498  7 -  23407841 catatc---t--------------------
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                       103380  7 +    143979 catatc---t--------------------
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cebuella_pygmaea.k141_793006                                 923 10 -     15088 cataac---aa--------------cc---
i Cebuella_pygmaea.k141_793006                           C 0 C 0
s Cebus_albifrons.Contig27                                25654403 10 +  26074798 cagaac---aa--------------cc---
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                2341 10 +     28840 CAGAAC---AA--------------CC---
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 2070 10 +     14051 CAGAAC---AA--------------CC---
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         8672 10 +     31688 cacagc---ta--------------ca---
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12234956  7 +  27778364 ---aac---ta--------------tc---
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5979  7 -     25243 ---aac---ta--------------tc---
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4481049  9 +   4669795 C-TAAC---AA--------------CC---
i Cercocebus_atys.KQ010504.1                             C 0 I 1
s Cercocebus_chrysogaster.k141_1540778                        5550  9 +     17872 C-TAAC---AA--------------CC---
i Cercocebus_chrysogaster.k141_1540778                   C 0 I 1
s Cercocebus_lunulatus.k141_3342297                           6138  9 -     14043 C-TAAC---AA--------------CC---
i Cercocebus_lunulatus.k141_3342297                      C 0 I 1
s Cercocebus_torquatus.k141_3057011                          14237  9 +     27781 C-TAAC---AA--------------CC---
i Cercocebus_torquatus.k141_3057011                      C 0 I 1
s Cercopithecus_ascanius.k141_1024104                        14402  9 -     20310 C-TAAC---AA--------------CC---
i Cercopithecus_ascanius.k141_1024104                    C 0 I 1
s Cercopithecus_cephus.k141_1078548                          17375  9 +     29689 C-TAAC---AA--------------CC---
i Cercopithecus_cephus.k141_1078548                      C 0 I 1
s Cercopithecus_diana.k141_1150327                           12134  9 -     20078 c-taac---aa--------------cc---
i Cercopithecus_diana.k141_1150327                       C 0 I 1
s Cercopithecus_hamlyni.k141_187466                          20048  9 -     27936 C-TAAC---AA--------------CC---
i Cercopithecus_hamlyni.k141_187466                      C 0 I 1
s Cercopithecus_lowei.k141_1854285                            8921  9 -     17152 C-TAAC---AA--------------CC---
i Cercopithecus_lowei.k141_1854285                       C 0 I 1
s Cercopithecus_albogularis.ctg5                                38828648  9 +  39242232 C-TAAC---AA--------------CC---
i Cercopithecus_albogularis.ctg5                               C 0 I 1
s Cercopithecus_mona.ctg39                                21228153  9 -  21565898 C-TAAC---AA--------------CC---
i Cercopithecus_mona.ctg39                               C 0 I 1
s Cercopithecus_neglectus.k141_2526306                       45265  9 -     53127 c-taac---aa--------------cc---
i Cercopithecus_neglectus.k141_2526306                   C 0 I 1
s Cercopithecus_nictitans.k141_1119862                        5526  9 +     13442 C-TAAC---AA--------------CC---
i Cercopithecus_nictitans.k141_1119862                   C 0 I 1
s Cercopithecus_petaurista.k141_807961                       20068  9 -     27947 C-TAAC---AA--------------CC---
i Cercopithecus_petaurista.k141_807961                   C 0 I 1
s Cercopithecus_pogonias.k141_2303387                         3096  9 +     10558 C-TAAC---AA--------------CC---
i Cercopithecus_pogonias.k141_2303387                    C 0 I 1
s Cercopithecus_roloway.k141_2581234                          6099  9 +     14005 c-taac---aa--------------cc---
i Cercopithecus_roloway.k141_2581234                     C 0 I 1
s Chiropotes_albinasus.k141_2206961                           2705 10 -     15524 catagc---aa--------------cc---
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chiropotes_israelita.k141_747660                          101972 10 +    146308 cttaac---aa--------------cc---
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          33779 10 -     50570 cttaac---aa--------------cc---
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18433971  8 -  18827391 c-taAC---AA---------------C---
i Chlorocebus_aethiops.ctg25                             C 0 I 1
s Chlorocebus_pygerythrus.k141_1025673                       20467  9 -     50209 c-taac---aa--------------cc---
i Chlorocebus_pygerythrus.k141_1025673                   C 0 I 1
s Chlorocebus_sabaeus.CM001947.1                         135427473  9 + 135778131 C-TAAC---AA--------------CC---
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 1
s Colobus_angolensis.KN981557.1                            1916009  9 +   2368649 C-TAAC---AA--------------CC---
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199954250  9 + 200372422 c-taAC---AA--------------CC---
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              42559  9 +     84244 C-TAAC---AA--------------CC---
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17552915 10 -  53390261 ---aataacta--------------cc---
i Condylura_cristata.JH655891.1                          I 2 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           4127  6 +     23735 ----gc---tc--------------cc---
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 54195  9 +     63868 catgtt---ta--------------c----
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 I 1
s Cricetulus_griseus.LT883664.1                           11669718  9 + 224834208 catgtt---ta--------------c----
i Cricetulus_griseus.LT883664.1                          C 0 I 1
s Crocidura_indochinensis.CroInd_scaffold_37019               6976  7 -     19598 ---AAC---TA--------------CC---
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             31825  6 -     87169 ----ac---ta--------------cc---
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  38582  7 +     51376 catgtc---t--------------------
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 10
s Dasyprocta_punctata.DasPun_flattened_line_15900             3205  7 -     75252 cgtatc---t--------------------
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 10
s Delphinapterus_leucas.KZ290073.1                        16815153  7 +  35494412 ---aac---ta--------------ct---
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  676798  7 +   1390856 ---aac---ta--------------tc---
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    9558  7 +    198055 ---aac---ta--------------tc---
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 35932  7 -     42551 catatc---t--------------------
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE797349.1                                   1041  6 -     31197 ----ac---ta--------------cc---
i Eidolon_helvum.KE797349.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       315420  7 +    607251 ---aac---ta--------------ct---
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          25078  9 -    110024 CATGTT---TA--------------A----
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 1
s Ellobius_talpinus.LOJH01081419.1                            5008  9 +      8657 catgtt---ta--------------c----
i Ellobius_talpinus.LOJH01081419.1                       C 0 I 1
s Enhydra_lutris.KZ291758.1                               16339344  6 -  41312741 ----tc---ta--------------cc---
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2151058 21 -  14770903 ---att---tatttcttataacttatc---
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1287092  7 +   4378816 ---aac---ca--------------cc---
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18534900  7 -  39960074 ---aac---ca--------------cc---
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               36929  7 +    498745 ---aac---ca--------------cc---
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21210643  9 -  21539334 c-taac---aa--------------cc---
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           14576  7 +    133382 ---aac---ta--------------ct---
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             28522  7 -     44125 ---aac---ta--------------ct---
i Eubalaena_japonica.EubJap_flattened_line_31514         I 2 C 0
s Felis_catus.CM001381.2                                  20240405  6 + 206538554 ----ac---ta--------------cc---
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20199276  6 + 205367284 ----ac---ta--------------cc---
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 12937  6 -     36744 ----ac---ta--------------cc---
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             853014  7 +   3816255 catacc---t--------------------
i Fukomys_damarensis.KN121974.1                          I 1 I 3
s Galago_moholi.ctg2040                                     429819  8 -    453645 TATAAC---TA-------------------
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             7509 10 +     11339 TATAAC---TA--------------CT---
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            4798 10 +     41679 TATAAC---TA--------------CT---
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               6043 10 -      9135 cacaac---ta--------------cc---
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     612662  7 -    660261 ---aac---ta--------------ct---
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            35757  9 +     49224 catatc---ta--------------c----
i Glis_glis.GliGli_scaffold_19807                        C 0 I 1
s Gorilla_beringei.k141_3596273                              20735 13 -     32273 cataac---ga--------------cctcg
i Gorilla_beringei.k141_3596273                          C 0 I 336
s Gorilla_gorilla.LT578341.1                             186342870 13 + 186649187 cataac---ga--------------cctcg
i Gorilla_gorilla.LT578341.1                             C 0 I 331
s Graphiurus_murinus.GraMur_scaffold_10447                   37380  9 +     78134 catatc---ta--------------c----
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 1
s Helogale_parvula.HelPar_flattened_line_2585               245636  6 +    327341 ----ac---ta--------------cc---
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 23257  7 +     36099 ---aac---ta--------------ct---
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               113998  7 +    128679 ---aac---ta--------------ct---
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       113797  6 +   1711038 ----ac---ta--------------cc---
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188               2363  6 +      9903 ----ac---ta--------------cc---
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 C 0
s Hoolock_leuconedys.ctg274                                    440321 10 +    630532 cataac---ga--------------cc---
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  48596  6 +     55795 ----AC---TA--------------CC---
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            27326  7 -    143317 catatc---t--------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 16
s Hystrix_cristata.HysCri_scaffold_5660                      85486  7 +    135385 catacc---t--------------------
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 3
s Ictidomys_tridecemlineatus.JH393364.1                    7525526  9 -   7955117 cctaac---ta--------------c----
i Ictidomys_tridecemlineatus.JH393364.1                  I 1 I 11
s Inia_geoffrensis.IniGeo_flattened_line_34779                2360  7 -     31341 ---aac---ta--------------ct---
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8278999  9 -   9596543 CATGCA---CA--------------C----
i Jaculus_jaculus.JH725527.1                             C 0 I 1
s Kogia_breviceps.KogBre_flattened_line_81059                 2099  7 -     18011 ---aac---ta--------------ct---
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         18026 10 -     38430 cataac---ag--------------cc---
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    20712 21 -     42476 ---atc---tatttctcataacttatc---
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        9661 10 +     64341 catagc---aa--------------cc---
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           2003 10 -     35062 catagc---aa--------------cc---
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        9690 10 +     35603 catagc---aa--------------cc---
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    31306 10 +     38576 cataat---aa--------------cc---
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         28010 10 +     66356 cataat---aa--------------cc---
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3059277  6 +   3914936 ----tc---ta--------------cc---
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             271631  7 -    662738 ---aac---ta--------------ct---
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1442598  9 +   1826925 C-TAAC---AA--------------CC---
i Lophocebus_aterrimus.ctg367                            C 0 I 1
s Loris_lydekkerianus.k141_399337                            17841 10 -     33856 TTTAAC---TA--------------CT---
i Loris_lydekkerianus.k141_399337                        C 0 C 0
s Loris_tardigradus.ctg83                                  1015552 10 +   6120653 TTTAAC---TA--------------CT---
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17959048  6 -  59628241 ----ac---ta--------------tc---
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                              12409  9 +     40492 C-TAAC---AA--------------CT---
i Macaca_arctoides.k141_2326796                          C 0 I 1
s Macaca_assamensis.Contig5                               59681656  9 +  60120075 C-TAAC---AA--------------CT---
i Macaca_assamensis.Contig5                              C 0 I 1
s Macaca_cyclopis.k119_18836                                 18205  9 -     26193 C-TAAC---AA--------------CT---
i Macaca_cyclopis.k119_18836                             C 0 I 1
s Macaca_fascicularis.k141_814140                            85980  9 -    114318 c-taac---aa--------------cc---
i Macaca_fascicularis.k141_814140                        C 0 I 1
s Macaca_fuscata.k119_255327                                 11671  9 -     23192 C-TAAC---AA--------------CT---
i Macaca_fuscata.k119_255327                             C 0 I 1
s Macaca_leonina.k141_3550399                                21136  9 -     29190 C-TAAC---AA--------------CT---
i Macaca_leonina.k141_3550399                            C 0 I 1
s Macaca_maura.k141_2733130                                  29715  9 +     37952 C-TAAC---AA--------------CT---
i Macaca_maura.k141_2733130                              C 0 I 1
s Macaca_mulatta.NC_041758.1                             186844788  9 + 187317192 C-TAAC---AA--------------CT---
i Macaca_mulatta.NC_041758.1                             C 0 I 1
s Macaca_nemestrina.KQ007038.1                            25463369  9 -  25927173 C-TAAC---AA--------------CT---
i Macaca_nemestrina.KQ007038.1                           C 0 I 1
s Macaca_nigra.k141_1655396                                  85573  9 +     89720 C-TAAC---AA--------------CT---
i Macaca_nigra.k141_1655396                              C 0 I 1
s Macaca_radiata.k141_3680011                                12585  9 +     20474 C-TAAC---AA--------------CT---
i Macaca_radiata.k141_3680011                            C 0 I 1
s Macaca_siberu.k141_635500                                  12359  9 -     14993 C-TAAC---AA--------------CT---
i Macaca_siberu.k141_635500                              C 0 I 1
s Macaca_silenus.Contig273                                  335222  9 -    668171 C-TAAC---AA--------------CT---
i Macaca_silenus.Contig273                               C 0 I 1
s Macaca_thibetana.k99_256239                                10646  9 -     24072 C-TAAC---AA--------------CT---
i Macaca_thibetana.k99_256239                            C 0 I 1
s Macaca_tonkeana.k141_1498238                               31280  9 -     45290 C-TAAC---AA--------------CT---
i Macaca_tonkeana.k141_1498238                           C 0 I 1
s Macroglossus_sobrinus.MacSob_scaffold_4024                  6083  6 +    270270 ----ac---ta--------------cc---
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23942871  9 -  24302211 C-GAAC---AA--------------CC---
i Mandrillus_leucophaeus.scaffold280                     C 0 I 1
s Mandrillus_sphinx.Contig270                               356979  9 +    752769 c-taac---aa--------------cc---
i Mandrillus_sphinx.Contig270                            C 0 I 1
s Marmota_marmota.CZRN01000018.1                          33106609  9 -  40650429 cctaac---ta--------------c----
i Marmota_marmota.CZRN01000018.1                         I 1 I 1
s Megaderma_lyra.MegLyr_scaffold_4542                        16651  6 -    207569 ----gc---ta--------------cc---
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             12922  6 +     13704 ----tc---ta--------------cc---
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 37661  9 +    140813 cacgtt---ta--------------c----
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 1
s Mesoplodon_bidens.MesBid_scaffold_108144                    6792  4 +     10310 ---------ta--------------ct---
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Mico_argentatus.k141_1024458                                 922 10 -     20047 cataac---aa--------------cc---
i Mico_argentatus.k141_1024458                           C 0 C 0
s Mico_humeralifer.k141_1346949                               1335 10 +      1399 cataac---aa--------------cc---
i Mico_humeralifer.k141_1346949                          C 0 C 0
s Mico_schneideri.k141_916733                                        922 10 +      5107 cataac---aa--------------cc---
i Mico_schneideri.k141_916733                                  C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1853830  7 +   8254450 ---aac---ta---c----------c----
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             37508  7 +     64694 ---aac---ta---c----------c----
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                          14551  9 -     28506 C-TAAC---AA--------------CC---
i Miopithecus_ogouensis.k141_534055                      C 0 I 1
s Mirounga_angustirostris.MirAng_flattened_line_55178          446  6 +     26817 ----tc---ta--------------cc---
i Mirounga_angustirostris.MirAng_flattened_line_55178    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    30537  7 -    437263 ---aac---ta--------------ct---
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 144541  5 -    366855 ---aac---ta-------------------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   4844  7 +     82753 ---aac---ta--------------tt---
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_40893                     643  6 +      5729 ----ac---ta--------------cc---
i Mungos_mungo.MunMun_flattened_line_40893               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                          11073 21 +     14753 ---att---tatttcttataacttatc---
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84365254  1 - 120012414 C-----------------------------
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87654658  1 - 129401213 C-----------------------------
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31359361  1 -  89631738 C-----------------------------
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90757445  1 - 130317789 C-----------------------------
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              9225  9 +     14296 catatc---ta--------------c----
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 1
s Mustela_putorius.JH418006.1                               304420  6 -  14710649 ----tc---ta--------------cc---
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     73839  7 -     80779 aatatc---t--------------------
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 I 10
s Myotis_brandtii.KE162005.1                                284555 21 -  10118263 ---att---tatttcttataacttatc---
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1591873 21 -   6019432 ---att---tattccttataacttatc---
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3907974 21 -   4330536 ---att---tatttcttataacttatc---
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_44643                         2530  5 +     25416 ---att---ta-------------------
i Myotis_myotis.MyoMyo_scaffold_44643                    C 0 I 14
s Nannospalax_galili.KL204047.1                            2040200  9 -   3037898 catacc---ta--------------c----
i Nannospalax_galili.KL204047.1                          C 0 I 1
s Nasalis_larvatus.k141_413338                               20616  9 +     21681 c-taac---aa--------------cc---
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20310217  6 +  31847680 ----tc---ta--------------cc---
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5869502  7 +   7148211 ---aac---ta--------------ct---
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    760770  5 +    783361 ---aac---tg-------------------
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9152965  6 -   9404916 ----ac---ta--------------cc---
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102596056 10 - 196305487 TTTAAC---TA--------------CT---
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1514628                             1523 10 -      5837 TTTAAC---TA--------------CT---
i Nycticebus_coucang.k141_1514628                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771978 10 + 199412804 TTTAAC---TA--------------CT---
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1368242  9 +   3988456 cataac---tg--------------c----
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              509042  6 -   2017862 ----tc---ta--------------cc---
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         148220  7 +    630418 ---aac---ta--------------ct---
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          82608  7 -    150152 ---aac---ta--------------ct---
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    84528  9 +    102263 CATGTT---TA--------------A----
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 I 1
s Orcinus_orca.KB316932.1                                  2785393  7 -  10937097 ---aac---ta--------------ct---
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       466390  6 -    559221 ----ac---ta--------------cc---
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         7311 10 +      8798 TATAAC---TA--------------CG---
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             699550 10 -   1103335 TATAAC---TA--------------CT---
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   17591056  7 +  44047080 ---aac---ta--------------ct---
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      179207  7 -    191736 ---aac---ta--------------ct---
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    48857 13 +     80009 cataac---ga--------------cctcg
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189147726 13 + 189151597 cataac---gA--------------CCTCG
i Pan_troglodytes.CM009242.2                             C 0 I 300
s Panthera_onca.PanOnc_flattened_line_3271                  154459  6 +    230217 ----aa---ta--------------cc---
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                267775  6 +  18783137 ----aa---ta--------------cc---
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4724595  6 -   8748460 ----ac---ta--------------cc---
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1269937  7 -   2937107 ---aac---ta--------------ct---
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183448792  8 + 183742232 A-GAAC---AA--------------C----
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            12318  9 +     20448 C-TAAC---AA--------------CC---
i Papio_cynocephalus.k141_4307930                        C 0 I 1
s Papio_hamadryas.Contig39                                20569129  9 +  20919399 c-taac---aa--------------cc---
i Papio_hamadryas.Contig39                               C 0 I 1
s Papio_kindae.k141_1936966                                  11075  9 +     41871 C-TAAC---AA--------------CC---
i Papio_kindae.k141_1936966                              C 0 I 1
s Papio_papio.k141_802527                                    14353  9 +     27711 C-TAAC---AA--------------CC---
i Papio_papio.k141_802527                                C 0 I 1
s Papio_ursinus.k141_5274964                                  5352  9 -     11374 C-TAAC---AA--------------CC---
i Papio_ursinus.k141_5274964                             C 0 I 1
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15856  6 -     78924 ----ac---ca--------------cc---
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1182643                            321 10 -      3244 TATAAC---TA--------------CT---
i Perodicticus_ibeanus.k141_1182643                      C 0 C 0
s Perodicticus_potto.k141_1186926                              699 10 +     10374 TATAAC---TA--------------TT---
i Perodicticus_potto.k141_1186926                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18215239  5 -  18517816 ----tt---ta--------------a----
i Peromyscus_maniculatus.KI615324.1                      C 0 I 1
s Petromus_typicus.PetTyp_scaffold_221660                     1256  7 -      2102 CACACC---T--------------------
i Petromus_typicus.PetTyp_scaffold_221660                I 1 I 3
s Phocoena_phocoena.PhoPho_flattened_line_24159              12464  7 +     63832 ---aac---ta--------------ct---
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            3720  9 +     68526 c-taac---aa--------------cc---
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        43857  9 +     89929 c-taac---aa--------------cc---
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            45273  9 +     51399 c-taac---aa--------------cc---
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14301509  9 -  14605196 C-TAAC---AA--------------CC---
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             5854 21 +     22620 ---att---tattttttataacttacc---
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pithecia_albicans.k141_1476471                              7244 10 +     26961 tataac---ag--------------cc---
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          3371 10 +     23417 tataac---ag--------------cc---
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                7236 10 +     29694 tataac---ag--------------cc---
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          32262 10 +     52772 tataac---ag--------------cc---
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           7258 10 +     26198 tataac---ag--------------cc---
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3943788 10 +   4542175 tataac---ag--------------cc---
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            7222 10 -     23490 tataac---ag--------------cc---
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610           2000  7 +      7680 ---aac---ta--------------ct---
i Platanista_gangetica.PlaMin_flattened_line_173610      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       11488 10 -     39866 catagc---aa--------------cc---
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        20651 10 +     34906 catagc---aa--------------cc---
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       24913 10 +     87950 caaagc---aa--------------cc---
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     25740 10 +     88961 catagc---aa--------------cc---
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         11410 10 +     39403 catagc---aa--------------cc---
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          25193 10 -     87928 caaagc---aa--------------cc---
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         32155 10 +     60166 catagc---aa--------------cc---
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      32351 10 +     67232 catagc---aa--------------cc---
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          27824 10 +     90634 catagc---aa--------------cc---
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          25197 10 -     89403 catagc---aa--------------cc---
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189136645 10 + 189387572 cataat---ga--------------cC---
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9576255 10 +   9816681 cataat---ga--------------cc---
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               78797  9 -     81375 c-taac---aa--------------cc---
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                             10633  9 +     19060 c-taac---aa--------------cc---
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            15267  9 -     21651 cacgtt---ta--------------c----
i Psammomys_obesus.NESX01036370.1                        C 0 I 1
s Pteronotus_parnellii.KE909381.1                            18093  5 -     21811 ---aac---ta-------------------
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_76658          1277  6 -      3818 ----tc---ta--------------cc---
i Pteronura_brasiliensis.PteBra_flattened_line_76658     C 0 C 0
s Pteropus_alecto.KB030862.1                              22987488  6 +  28871421 ----ac---ta--------------cc---
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1371048  6 +   4952924 ----ac---ta--------------cc---
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20277665  6 -  38429054 ----ac---ta--------------cc---
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             20610  9 -     91421 c-taac---aa--------------cc---
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7614735  9 +   7812017 c-taac---aa--------------cc---
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             20640  9 -     72585 c-taac---aa--------------cc---
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                 10056  7 +     55207 ---aac---ta--------------ct---
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53574670  9 +  90668790 CACATT---TA--------------C----
i Rattus_norvegicus.chr16                                C 0 I 1
s Rhinolophus_sinicus.LVEH01000134.1                        370245  6 -   3329780 ----ac---ta--------------cc---
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_1041714                            1203  9 +      5697 c-taac---aa--------------cc---
i Rhinopithecus_bieti.k119_1041714                       C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91241676  9 - 195417433 C-TAAC---AA--------------CC---
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7677325  9 +   7961872 c-taac---aa--------------cc---
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_121563                 320  6 +      1157 ----ac---ta--------------cc---
i Rousettus_aegyptiacus.RouAeg_scaffold_121563           C 0 C 0
s Saguinus_bicolor.k141_8081                                  2970 10 +     42994 catagc---aa--------------cc---
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                             1645 10 +      2253 catagc---aa--------------cc---
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               2094 10 -      8737 catagc---aa--------------cc---
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                              1726 10 +      2343 catagc---aa--------------cc---
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209476627 10 + 209938924 catagc---aa--------------cc---
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                1053 10 -      7576 catagc---aa--------------cc---
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_133311                       2514  7 +      9503 ---aac---ta--------------ct---
i Saiga_tatarica.SaiTat_scaffold_133311                  C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119952696 10 - 121099817 cataac---aa--------------cc---
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       25038 10 +     46362 CATAAC---AA--------------CC---
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               25133 10 +     45824 CATAAC---AA--------------CC---
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             41811 10 -     64574 CATAAC---AA--------------CC---
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4885 10 -     23631 CATAAC---AA--------------CC---
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 25029 10 -     61129 CATAAC---AA--------------CC---
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5422361 10 -   5703754 CAGAAC---AA--------------CC---
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          57602 10 -     80660 CAGAAC---AA--------------CC---
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Semnopithecus_entellus.k141_1672505                         5469  9 -     12572 c-taac---aa--------------cc---
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      32322  9 +     39453 c-taac---aa--------------cc---
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           12826  9 +     27826 c-taac---aa--------------cc---
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            12372  9 -     19483 c-taac---aa--------------cc---
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      5668  9 -     12762 c-taac---aa--------------cc---
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           5511  9 +     13763 c-taac---aa--------------cc---
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     4492  9 -     30804 CACATT---TA--------------C----
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 I 1
s Solenodon_paradoxus.SolPar_flattened_line_126               5185  7 +   1910179 ---aac---tt--------------cc---
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1957410  9 -   3870691 cctaac---ta--------------c----
i Spermophilus_dauricus.KZ294078.1                       I 1 I 1
s Spilogale_gracilis.SpiGra_flattened_line_13525             33344  6 +     97271 ----tc---ta--------------tc---
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              21910  6 -    196729 ----ac---ta--------------cc---
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6815010  7 +  69701581 ---aac---ta--------------ct---
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                14612  8 +     41958 ---aat---ta---c----------cc---
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      122270  7 -    156842 ---aac---ta--------------tc---
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    390751  7 +    539355 ---aac---ta--------------tc---
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               29366 10 +     70052 CACAGC---TA--------------CA---
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                4162 10 -     16117 CACAGC---TA--------------CA---
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186433980  9 + 186847797 C-TAAC---AA--------------CC---
i Theropithecus_gelada.CM009954.1                        C 0 I 1
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              108084  7 +    114563 CATATC---T--------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 1 I 3
s Trachypithecus_auratus.k141_722599                         16408  9 -     20410 c-taac---aa--------------cc---
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      5528  9 -     12674 c-taac---aa--------------cc---
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       16516  9 +     19930 c-taac---aa--------------cc---
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      12916  9 -     19997 c-taac---aa--------------cc---
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            53059  9 -     60166 c-taac---aa--------------cc---
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        20522  9 -     27529 c-taac---aa--------------cc---
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                       2150  9 +      9229 c-taac---aa--------------cc---
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          14049  9 -     21137 c-taac---aa--------------cc---
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                    2154  9 +      9131 c-taac---aa--------------cc---
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                         2113  9 -      3730 c-taac---aa--------------cc---
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        30382  9 +     32220 c-taac---aa--------------cc---
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5944480  9 +   6242583 c-taac---aa--------------cc---
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       13737  9 +     20839 c-taac---aa--------------cc---
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    3937  7 +     27266 ---aac---ta--------------ct---
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tupaia_chinensis.KB320699.1                              2166502 10 +   4065304 cataac---ta--------------ct---
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       2871 10 +     70247 cataac---ta--------------ct---
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15741645  7 +  33153633 ---aac---ta--------------ct---
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   57741  9 -     77625 ---aatga-aa--------------cc---
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4853003  6 -   5085361 ----tc---ta--------------cc---
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 14506  6 -     43706 ----ac---ta--------------cc---
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          4452  9 +    224448 cataac---ta--------------c----
i Xerus_inauris.XerIna_scaffold_2302                     I 1 I 1
s Zapus_hudsonius.ZapHud_scaffold_11398                      17751  9 +     63895 catgca---ca--------------c----
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 1
s Ziphius_cavirostris.ZipCav_flattened_line_1424488            281  4 -       542 ---------ta--------------ct---
i Ziphius_cavirostris.ZipCav_flattened_line_1424488      C 0 C 0
e Cheracebus_torquatus.k141_1170026                          64344 81 +     76511 I
e Cheracebus_regulus.k141_471822                            159875 81 -    216457 I
e Cheracebus_lugens.k141_1393925                              2308 81 +     17877 I
e Cheracebus_lucifer.k141_49986                               2432 81 -     17098 I
e Echinops_telfairi.JH980293.1                            48781896  0 + 111700974 C
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1494  0 +      4343 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vicugna_pacos.KN270157.1                                 5374276 47 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294973  0 +  10818551 C
e Tonatia_saurophila.TonSau_scaffold_294                     83346 714 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_85600                    5751  1 +     18632 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Sorex_araneus.JH798187.1                                13653314 9235 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    156307 109 -    313613 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15806  0 -     22811 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                       107181400  0 - 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12287  0 -     18566 C
e Ondatra_zibethicus.OndZib_scaffold_7387                      632 3336 +    140218 I
e Octodon_degus.JH651603.1                                  750513 17 +  11899542 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                18000 920 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24609  0 -    145209 C
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184766 1004 -  29670104 I
e Manis_pentadactyla.KN006162.1                              54034 31 -    317179 I
e Manis_javanica.JSZB01003497.1                              21892 31 +    737560 I
e Loxodonta_africana.GL010049.1                            4219685  0 -  43346337 C
e Lepus_americanus.LepAme_scaffold_107385                     5119  0 +     14121 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3353  0 +      7595 C
e Heterocephalus_glaber.JH602082.1                        20664195 469 +  22651954 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    39057 4687 +     67921 I
e Desmodus_rotundus.KZ672289.1                             8632254 708 +  20541912 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            70652  1 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    839213  0 +   1526836 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1255607 4808 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            7648  1 -      8501 I
e Carollia_perspicillata.CarPer_scaffold_92756                7250 707 -     11696 I
e Camelus_ferus.KB017975.1                                  405530 47 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2337232 47 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10004760 47 -  17673402 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6909 705 +     43469 I
e Anoura_caudifer.AnoCau_scaffold_1412                      187499 706 +    412891 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      11522 323 +     62944 gccgggcgcggtggctcacgcctgtaatcccagcacttcgggaggccgagacgggcggat------catgaggtcaggagatcgagaccatcttggctaacacggtgaaa-ccccgtctctatta-aaaatacaaaaaa-ttagctgggcctggtgtccggcgcctgtaatcccagctactcgggaggctgaggcaggagaatggcatgaacccgggaggcggagcttgcattgagc-cgagatcgcaccactgcactccagcctgggcgacagagcgagactccgtctcaaataa---ataaataaataaataaataaataaataaataaataat
s Gorilla_beringei.k141_2066350                                909 323 +      1742 gccgggcgcggtggctcacgcctgtaatcccagcacttcgggaggccgaggcgggcggat------catgaggtcaggagatcgagaccatcttggctaacacggtgaaa-ccccgtctctacta-aaaatacaaaaaa-ttggttgggcgtggtggcgggcgcctgtagtcccagctactcaggaggctgaggcaggagaatggcgggaacccgggaggcggagcttgcagtgagc-caagatcatgccactgcactccagcctgggcgacagagcgagactccgtctcaaaaaa---ataaaTAAATAAATAAATAAATAAATAAATAAATAAT
i Gorilla_beringei.k141_2066350                          I 56 C 0
s Gorilla_gorilla.CYUI03001204.1                             18337 323 -     63219 gccgggcgcggtggctcacgcctgtaatcccagcacttcgggaggccgaggcgggcagat------catgaggtcaggagatcgagaccatcttggctaacacggtgaaa-ccccgtctctacta-aaaatacaaaaaa-ttggtggg--ctggtggc-ggcgcctgtagtcgcagctactcaggaggctgaggcaggagaatggcgggaacccgggaggcggagcttgcagtgagc-caagatcatgccactgcactccagcctgggcgacagagcgagactccgtctcaaaaaataaataaataaataaataaataaataaataaataaataat
i Gorilla_gorilla.CYUI03001204.1                         I 56 C 0
s Pan_paniscus.KQ411613.1                                    48870 307 +     80009 gccgggcgcggtggctcacgcctgtaatcccagcacttcgggaggccgagacgggcggat------catgaggtcaggagatcgagaccatcttggctaacacggtgaaa-ccccgtctctatta-aaaatacaaaaaa-ttagctgggcctggtgtccggcgcctgtaatcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcattgagc-cgagatcgcaccactgcactccagcctgggcgacagagcgagactccgtctc-------------------aaataaataaataaatgaataaataat
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.NBAG03001836.1                             34798 307 +     51860 gccgggcgcggtggctcacgcctgtaatcccagcacttcgggaggccgagacgggcggat------catgaggtcaggagatcgagaccatcttggctaacacggtgaaa-ccccgtctctatta-aaaatacaaaaaa-ttagctgggcctggtgtccggcgcctgtaatcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcattgagc-cgagatcgcaccactgcactccagcctgggcgacagagcgagactccgtctc-------------------aaataaataaataaatgaataaataat
i Pan_troglodytes.NBAG03001836.1                         I 89 I 59
e Cheracebus_torquatus.k141_1170026                          64344  81 +     76511 I
e Cheracebus_regulus.k141_471822                            159875  81 -    216457 I
e Cheracebus_lugens.k141_1393925                              2308  81 +     17877 I
e Cheracebus_lucifer.k141_49986                               2432  81 -     17098 I
e Plecturocebus_moloch.k141_1031110                          25207   0 -     89403 C
e Plecturocebus_miltoni.k141_349282                          27834   0 +     90634 C
e Plecturocebus_hoffmannsi.k141_3303950                      32361   0 +     67232 C
e Plecturocebus_grovesi.k141_2013005                         32165   0 +     60166 C
e Plecturocebus_dubius.k141_1058799                          25203   0 -     87928 C
e Plecturocebus_cupreus.k141_2351393                         11420   0 +     39403 C
e Plecturocebus_cinerascens.k141_1164729                     25750   0 +     88961 C
e Plecturocebus_caligatus.k141_1382851                       24923   0 +     87950 C
e Plecturocebus_brunneus.k141_1495506                        20661   0 +     34906 C
e Plecturocebus_bernhardi.k141_2549090                       11498   0 -     39866 C
e Pithecia_vanzolinii.k141_1697688                            7232   0 -     23490 C
e Pithecia_pithecia.tarseq_165                             3943798   0 +   4542175 C
e Pithecia_pissinattii.k141_1824269                           7268   0 +     26198 C
e Pithecia_mittermeieri.k141_446740                          32272   0 +     52772 C
e Pithecia_hirsuta.k141_305604                                7246   0 +     29694 C
e Pithecia_chrysocephala.k141_839575                          3381   0 +     23417 C
e Pithecia_albicans.k141_1476471                              7254   0 +     26961 C
e Lagothrix_lagothricha.k141_1005387                         18036   0 -     38430 C
e Chiropotes_sagulatus.k141_1421488                          33789   0 -     50570 C
e Chiropotes_israelita.k141_747660                          101982   0 +    146308 C
e Cacajao_melanocephalus.k141_619699                         57639   0 -    119600 C
e Cacajao_hosomi.k141_81245                                  33539   0 -     95584 C
e Cacajao_calvus.k141_5142                                   64357   0 +     81800 C
e Cacajao_ayresi.k141_552049                                104854   0 -    122966 C
e Ateles_paniscus.k141_457735                                23865   0 +     72325 C
e Ateles_marginatus.k141_803263                              15977   0 -     40414 C
e Ateles_geoffroyi_a.k141_833924                               11595   0 -     89868 C
e Ateles_chamek.k141_1806455                                 29820   0 -     30947 C
e Ateles_belzebuth.k141_445860                               47019   0 -     48001 C
e Ateles_geoffroyi_b.tarseq_1536                             21212220   0 -  21539123 C
e Echinops_telfairi.JH980293.1                            48781896   0 + 111700974 C
e Otolemur_garnettii.GL873799.1                             699560   0 -   1103335 C
e Otolemur_crassicaudatus.k141_222918                         7321   0 +      8798 C
e Galago_senegalensis.k141_631886                             7519   0 +     11339 C
e Galago_moholi.ctg2040                                     429827   0 -    453645 C
e Sapajus_macrocephalus.k141_351809                          57612   0 -     80660 C
e Sapajus_apella.ctg103                                    5422371   0 -   5703754 C
e Saimiri_ustus.k141_1484609                                 25039   0 -     61129 C
e Saimiri_sciureus.k141_2278166                               4895   0 -     23631 C
e Saimiri_oerstedii.k141_1487881                             41821   0 -     64574 C
e Saimiri_macrodon.k141_716185                               25143   0 +     45824 C
e Saimiri_cassiquiarensis.k141_2188234                       25048   0 +     46362 C
e Saimiri_boliviensis.NW_024100920.1                     119952706   0 - 121099817 C
e Saguinus_mystax.k141_4699220                                1063   0 -      7576 C
e Saguinus_midas.LG03                                    209476637   0 + 209938924 C
e Saguinus_labiatus.k141_4004060                              1736   0 +      2343 C
e Saguinus_inustus.k141_3945547                               2104   0 -      8737 C
e Saguinus_imperator.k141_1496743                             1655   0 +      2253 C
e Saguinus_bicolor.k141_8081                                  2980   0 +     42994 C
e Mico_schneideri.k141_916733                                        932   0 +      5107 C
e Mico_humeralifer.k141_1346949                               1345   0 +      1399 C
e Mico_argentatus.k141_1024458                                 932   0 -     20047 C
e Leontopithecus_rosalia.k141_464620                         28020   0 +     66356 C
e Leontopithecus_chrysomelas.k141_1519602                    31316   0 +     38576 C
e Leontocebus_nigricollis.k141_4610752                        9700   0 +     35603 C
e Leontocebus_illigeri.k141_1304848                           2013   0 -     35062 C
e Leontocebus_fuscicollis.k141_1820339                        9671   0 +     64341 C
e Chiropotes_albinasus.k141_2206961                           2715   0 -     15524 C
e Cebus_unicolor.k141_1837183                                 2080   0 +     14051 C
e Cebus_olivaceus.k141_1764483                                2351   0 +     28840 C
e Cebus_albifrons.Contig27                                25654413   0 +  26074798 C
e Cebuella_pygmaea.k141_793006                                 933   0 -     15088 C
e Cebuella_niveiventris.k141_280505                          14658   0 +     15466 C
e Callithrix_kuhlii.k119_1168854                              1907   0 -     12329 C
e Callithrix_jacchus.pat_scaffold_3                       23593093   0 - 189096842 C
e Callithrix_geoffroyi.k119_69176                             1232   0 +      5377 C
e Callimico_goeldii.k141_737284                                936   0 -     31217 C
e Callibella_humilis.k141_10318                               1296   0 +     27907 C
e Aotus_vociferans.k141_344750                               30692   0 -     47192 C
e Aotus_trivirgatus.k141_2152450                             17568   0 -     34685 C
e Aotus_nancymaae.KZ198451.1                               4299959   0 -   5030052 C
e Aotus_griseimembra.k141_2240599                            17532   0 -     34016 C
e Aotus_azarae.k141_3104676                                  17534   0 -     33861 C
e Alouatta_seniculus.k141_117119                             18993   0 +     50774 C
e Alouatta_puruensis.k141_362188                              4542   0 +      5663 C
e Alouatta_palliata.k141_2135620                              8041   0 +     47717 C
e Alouatta_nigerrima.k141_1929159                             3820   0 +     30492 C
e Alouatta_macconnelli.k141_918386                            4862   0 -      9457 C
e Alouatta_juara.k141_1302312                                 3774   0 +     27940 C
e Alouatta_discolor.k141_566626                              15301   0 +     28687 C
e Alouatta_caraya.k141_1701091                                4849   0 -     36483 C
e Alouatta_belzebul.k141_3560514                             11738   0 +     51355 C
e Mus_pahari.LT608297.1                                   31359362   0 -  89631738 C
e Mus_spretus.CM004101.1                                  90757446   0 - 130317789 C
e Mus_musculus.chr8                                       87654659   0 - 129401213 C
e Mus_caroli.LT608237.1                                   84365255   0 - 120012414 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1494   0 +      4343 C
e Loris_tardigradus.ctg83                                  1015562   0 +   6120653 C
e Loris_lydekkerianus.k141_399337                            17851   0 -     33856 C
e Perodicticus_potto.k141_1186926                              709   0 +     10374 C
e Perodicticus_ibeanus.k141_1182643                            331   0 -      3244 C
e Ziphius_cavirostris.ZipCav_flattened_line_1424488            285   0 -       542 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      17760   1 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Xerus_inauris.XerIna_scaffold_2302                          4461   1 +    224448 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 14512   0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5374276  47 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4853009   0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   57750   0 -     77625 C
e Tursiops_truncatus.MRVK01000835.1                       15741652   0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_394                       2881   0 +     70247 C
e Tupaia_chinensis.KB320699.1                              2166512   0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4294973   0 +  10818551 C
e Tragulus_javanicus.TraJav_scaffold_40725                    3944   0 +     27266 C
e Trachypithecus_pileatus.k141_2007326                       13746   0 +     20839 C
e Trachypithecus_phayrei.ctg124                            5944489   0 +   6242583 C
e Trachypithecus_obscurus.k141_190785                        30391   0 +     32220 C
e Trachypithecus_melamera.k141_105182                         2122   0 -      3730 C
e Trachypithecus_leucocephalus.k141_101510                    2163   0 +      9131 C
e Trachypithecus_laotum.k141_907409                          14058   0 -     21137 C
e Trachypithecus_hatinhensis.k141_17719                       2159   0 +      9229 C
e Trachypithecus_germaini.k141_912491                        20531   0 -     27529 C
e Trachypithecus_geei.k141_277701                            53068   0 -     60166 C
e Trachypithecus_francoisi.k141_1412647                      12925   0 -     19997 C
e Trachypithecus_cristatus.k141_580354                       16525   0 +     19930 C
e Trachypithecus_crepusculus.k141_582567                      5537   0 -     12674 C
e Trachypithecus_auratus.k141_722599                         16417   0 -     20410 C
e Tonatia_saurophila.TonSau_scaffold_294                     83346 714 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_85600                    5751   1 +     18632 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              108091   3 +    114563 I
e Theropithecus_gelada.CM009954.1                        186433989   1 + 186847797 I
e Tarsius_wallacei.k141_254427                                4172   0 -     16117 C
e Tarsius_lariang.k141_2201908                               29376   0 +     70052 C
e Tapirus_terrestris.TapTer_scaffold_755                    390758   0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      122277   0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                14620   0 +     41958 C
e Symphalangus_syndactylus.tarseq_199                      1093192   0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6815017   0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629              21916   0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             33350   0 +     97271 C
e Spermophilus_dauricus.KZ294078.1                         1957419   1 -   3870691 I
e Sorex_araneus.JH798187.1                                13653314 9235 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               5192   0 +   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_42075                     4501   1 -     30804 I
e Semnopithecus_vetulus.k141_910252                           5520   0 +     13763 C
e Semnopithecus_schistaceus.k141_1572284                      5677   0 -     12762 C
e Semnopithecus_priam.k141_638794                            12381   0 -     19483 C
e Semnopithecus_johnii.k141_670120                           12835   0 +     27826 C
e Semnopithecus_hypoleucos.k141_1615806                      32331   0 +     39453 C
e Semnopithecus_entellus.k141_1672505                         5478   0 -     12572 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    156307 109 -    313613 I
e Saiga_tatarica.SaiTat_scaffold_133311                       2521   0 +      9503 C
e Rousettus_aegyptiacus.RouAeg_scaffold_121563                 326   0 +      1157 C
e Rhinopithecus_strykeri.ctg102                            7677334   0 +   7961872 C
e Rhinopithecus_roxellana.NC_044550.1                     91241685   0 - 195417433 C
e Rhinopithecus_bieti.k119_1041714                            1212   0 +      5697 C
e Rhinolophus_sinicus.LVEH01000134.1                        370251   0 -   3329780 C
e Rattus_norvegicus.chr16                                 53574679   1 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                 10063   0 +     55207 C
e Pygathrix_nigripes_a.k141_215492                             20649   0 -     72585 C
e Pygathrix_nigripes_b.ctg100                                 7614744   0 +   7812017 C
e Pygathrix_cinerea.k141_1153803                             20619   0 -     91421 C
e Puma_concolor.QAVW01001104.1                            20277671   0 -  38429054 C
e Pteropus_vampyrus.KN525825.1                             1371054   0 +   4952924 C
e Pteropus_alecto.KB030862.1                              22987494   0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_76658          1283   0 -      3818 C
e Pteronotus_parnellii.KE909381.1                            18098   0 -     21811 C
e Psammomys_obesus.NESX01036370.1                            15276   1 -     21651 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15806   0 -     22811 C
e Presbytis_mitrata.k141_1087752                             10642   0 +     19060 C
e Presbytis_comata.k141_677006                               78806   0 -     81375 C
e Pongo_pygmaeus.ctg66                                     9576265   0 +   9816681 C
e Pongo_abelii.CM009266.2                                189136655   0 + 189387572 C
e Platanista_gangetica.PlaMin_flattened_line_173610           2007   0 +      7680 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             5875   0 +     22620 C
e Piliocolobus_tephrosceles.PDMG02000141.1                14301518   0 -  14605196 C
e Piliocolobus_kirkii.k141_448987                            45282   0 +     51399 C
e Piliocolobus_gordonorum.k141_381342                        43866   0 +     89929 C
e Piliocolobus_badius.k141_1142974                            3729   0 +     68526 C
e Phocoena_phocoena.PhoPho_flattened_line_24159              12471   0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_221660                     1263   3 -      2102 I
e Peromyscus_maniculatus.KI615324.1                       18215244   1 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690  60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15862   0 -     78924 C
e Papio_ursinus.k141_5274964                                  5361   1 -     11374 I
e Papio_papio.k141_802527                                    14362   1 +     27711 I
e Papio_kindae.k141_1936966                                  11084   1 +     41871 I
e Papio_hamadryas.Contig39                                20569138   1 +  20919399 I
e Papio_cynocephalus.k141_4307930                            12327   1 +     20448 I
e Papio_anubis.CM001495.2                                183448800   0 + 183742232 C
e Pantholops_hodgsonii.KE114653.1                          1269944   0 -   2937107 C
e Panthera_tigris.KE722367.1                               4724601   0 -   8748460 C
e Panthera_pardus.KV860321.1                                267781   0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  154465   0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      179214   0 -    191736 C
e Ovis_aries.CM001607.2                                   17591063   0 +  44047080 C
e Otocyon_megalotis.JAEUCK010005147.1                       466396   0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                       107181400   0 - 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12287   0 -     18566 C
e Orcinus_orca.KB316932.1                                  2785400   0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    84537   1 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_7387                      632 3336 +    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          82615   0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         148227   0 +    630418 C
e Odobenus_rosmarus.KB229312.1                              509048   0 -   2017862 C
e Octodon_degus.JH651603.1                                  750513  17 +  11899542 I
e Ochotona_princeps.JH802162.1                             1368251   0 +   3988456 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771988   0 + 199412804 C
e Nycticebus_coucang.k141_1514628                             1533   0 -      5837 C
e Nycticebus_bengalensis.LG01                            102596066   0 - 196305487 C
e Nyctereutes_procyonoides.CAJHUB010000658.1               9152971   0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    760775   0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5869509   0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20310223   0 +  31847680 C
e Nasalis_larvatus.k141_413338                               20625   0 +     21681 C
e Nannospalax_galili.KL204047.1                            2040209   1 -   3037898 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_44643                         2535  14 +     25416 I
e Myotis_lucifugus.GL429869.1                              3907995   0 -   4330536 C
e Myotis_davidii.KB100139.1                                1591894   0 -   6019432 C
e Myotis_brandtii.KE162005.1                                284576   0 -  10118263 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     73846  10 -     80779 I
e Mustela_putorius.JH418006.1                               304426   0 -  14710649 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              9234   1 +     14296 I
e Murina_feae.MurFea_scaffold_85699                          11094   0 +     14753 C
e Mungos_mungo.MunMun_flattened_line_40893                     649   0 +      5729 C
e Moschus_moschiferus.MosMos_scaffold_13123                   4851   0 +     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 144546   0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    30544   0 -    437263 C
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_55178          452   0 +     26817 C
e Miopithecus_ogouensis.k141_534055                          14560   1 -     28506 I
e Miniopterus_schreibersii.MinSch_scaffold_18080             37515   0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1853837   0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                18000 920 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24609   0 -    145209 C
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    6796   0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12184766 1004 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 37670   1 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365             12928   0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                        16657   0 -    207569 C
e Marmota_marmota.CZRN01000018.1                          33106618   1 -  40650429 I
e Manis_pentadactyla.KN006162.1                              54034  31 -    317179 I
e Manis_javanica.JSZB01003497.1                              21892  31 +    737560 I
e Mandrillus_sphinx.Contig270                               356988   1 +    752769 I
e Mandrillus_leucophaeus.scaffold280                      23942880   1 -  24302211 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                  6089   0 +    270270 C
e Macaca_tonkeana.k141_1498238                               31289   1 -     45290 I
e Macaca_thibetana.k99_256239                                10655   1 -     24072 I
e Macaca_silenus.Contig273                                  335231   1 -    668171 I
e Macaca_siberu.k141_635500                                  12368   1 -     14993 I
e Macaca_radiata.k141_3680011                                12594   1 +     20474 I
e Macaca_nigra.k141_1655396                                  85582   1 +     89720 I
e Macaca_nemestrina.KQ007038.1                            25463378   1 -  25927173 I
e Macaca_mulatta.NC_041758.1                             186844797   1 + 187317192 I
e Macaca_maura.k141_2733130                                  29724   1 +     37952 I
e Macaca_leonina.k141_3550399                                21145   1 -     29190 I
e Macaca_fuscata.k119_255327                                 11680   1 -     23192 I
e Macaca_fascicularis.k141_814140                            85989   1 -    114318 I
e Macaca_cyclopis.k119_18836                                 18214   1 -     26193 I
e Macaca_assamensis.Contig5                               59681665   1 +  60120075 I
e Macaca_arctoides.k141_2326796                              12418   1 +     40492 I
e Lycaon_pictus.CM007581.1                                17959054   0 -  59628241 C
e Loxodonta_africana.GL010049.1                            4219685   0 -  43346337 C
e Lophocebus_aterrimus.ctg367                              1442607   1 +   1826925 I
e Lipotes_vexillifer.KE559953.1                             271638   0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     5119   0 +     14121 I
e Leptonychotes_weddellii.KB714746.1                       3059283   0 +   3914936 C
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Lasiurus_borealis.LasBor_scaffold_32767                    20733   0 -     42476 C
e Kogia_breviceps.KogBre_flattened_line_81059                 2106   0 -     18011 C
e Jaculus_jaculus.JH725527.1                               8279008   1 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_34779                2367   0 -     31341 C
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7525535  11 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      85493   3 +    135385 I
e Hylobates_pileatus_a.tarseq_633                            3336052   0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157   0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374   0 +     14092 C
e Hylobates_agilis.k141_232023                                2330   0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            27333  16 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  48602   0 +     55795 C
e Hoolock_leuconedys.ctg274                                    440331   0 +    630532 C
e Hipposideros_galeritus.HipGal_scaffold_101188               2369   0 +      9903 C
e Hipposideros_armiger.JXIK01000431.1                       113803   0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               114005   0 +    128679 C
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3353   0 +      7595 C
e Heterocephalus_glaber.JH602082.1                        20664195 469 +  22651954 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 23264   0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               245642   0 +    327341 C
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Graphiurus_murinus.GraMur_scaffold_10447                   37389   1 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            35766   1 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     612669   0 -    660261 C
e Galeopterus_variegatus.GalVar_scaffold_108840               6053   0 -      9135 C
e Galagoides_demidoff.k141_1711393                            4808   0 +     41679 C
e Fukomys_damarensis.KN121974.1                             853021   3 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                 12943   0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20199282   0 + 205367284 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Eubalaena_japonica.EubJap_flattened_line_31514             28529   0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           14583   0 +    133382 C
e Erythrocebus_patas.Contig38                             21210652   0 -  21539334 C
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               36936   0 +    498745 C
e Equus_caballus.CM000403.2                               18534907   0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1287099   0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2151079   0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16339350   0 -  41312741 C
e Ellobius_talpinus.LOJH01081419.1                            5017   1 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          25087   1 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       315427   0 +    607251 C
e Eidolon_helvum.KE797349.1                                   1047   0 -     31197 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 35939   0 -     42551 C
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    39057 4687 +     67921 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    9565   0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  676805   0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8632254 708 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16815160   0 +  35494412 C
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            70652   1 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_15900             3212  10 -     75252 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  38589  10 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    839213   0 +   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129             31831   0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_37019               6983   0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11669727   1 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 54204   1 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           4133   0 +     23735 C
e Condylura_cristata.JH655891.1                           17552925   0 -  53390261 C
e Colobus_polykomos.k141_906115                              42568   0 +     84244 C
e Colobus_guereza.LG01                                   199954259   0 + 200372422 C
e Colobus_angolensis.KN981557.1                            1916018   0 +   2368649 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chlorocebus_sabaeus.CM001947.1                         135427482   1 + 135778131 I
e Chlorocebus_pygerythrus.k141_1025673                       20476   1 -     50209 I
e Chlorocebus_aethiops.ctg25                              18433979   1 -  18827391 I
e Chinchilla_lanigera.JH722012.1                           1255607 4808 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            7648   1 -      8501 I
e Cercopithecus_roloway.k141_2581234                          6108   1 +     14005 I
e Cercopithecus_pogonias.k141_2303387                         3105   1 +     10558 I
e Cercopithecus_petaurista.k141_807961                       20077   1 -     27947 I
e Cercopithecus_nictitans.k141_1119862                        5535   1 +     13442 I
e Cercopithecus_neglectus.k141_2526306                       45274   1 -     53127 I
e Cercopithecus_mona.ctg39                                21228162   1 -  21565898 I
e Cercopithecus_albogularis.ctg5                                38828657   1 +  39242232 I
e Cercopithecus_lowei.k141_1854285                            8930   1 -     17152 I
e Cercopithecus_hamlyni.k141_187466                          20057   1 -     27936 I
e Cercopithecus_diana.k141_1150327                           12143   1 -     20078 I
e Cercopithecus_cephus.k141_1078548                          17384   1 +     29689 I
e Cercopithecus_ascanius.k141_1024104                        14411   1 -     20310 I
e Cercocebus_torquatus.k141_3057011                          14246   1 +     27781 I
e Cercocebus_lunulatus.k141_3342297                           6147   1 -     14043 I
e Cercocebus_chrysogaster.k141_1540778                        5559   1 +     17872 I
e Cercocebus_atys.KQ010504.1                               4481058   1 +   4669795 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5986   0 -     25243 C
e Cephalopachus_bancanus.k141_1423433                         8682   0 +     31688 C
e Cavia_tschudii.CavTsc_scaffold_8919                       103387   0 +    143979 C
e Cavia_porcellus.DS562891.1                              18364505   0 -  23407841 C
e Cavia_aperea.AVPZ01000300.1                             18352245   0 -  23392119 C
e Catagonus_wagneri.CatWag_scaffold_2839                     97422   0 +    217609 C
e Castor_canadensis.CasCan_scaffold_2074                    140363   1 +    179628 I
e Carollia_perspicillata.CarPer_scaffold_92756                7250 707 -     11696 I
e Carlito_syrichta.NW_007259797.1                           158878   0 -    496798 C
e Capromys_pilorides.CapPil_scaffold_65020                    3669  10 -     12242 I
e Capra_hircus.CM004588.1                                 18065771   0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18834970   0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18504111   0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17962814   0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9038338   0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     3643   0 -     43241 C
e CanFam4.chr16                                           17802897   0 -  60362399 C
e Camelus_ferus.KB017975.1                                  405530  47 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2337232  47 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10004760  47 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2824487   0 +   4408762 C
e Bos_taurus.CM000203.6                                   18088535   0 +  45695690 C
e Bos_mutus.JH880303.1                                     1130451   0 -   1948126 C
e Bos_indicus.CM003047.1                                  20277897   0 +  48749331 C
e Bison_bison.KN261452.1                                    204660   0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    32025   0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         5750   0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15195285   0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6909 705 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         650   0 +      5281 C
e Aplodontia_rufa.AprRuf_scaffold_68852                      15944   1 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_43303              2212   0 -     32520 C
e Anoura_caudifer.AnoCau_scaffold_1412                      187499 706 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          680945   0 -   2318259 C
e Allochrocebus_solatus.k141_166128                          11398   1 -     12518 I
e Allochrocebus_preussi.k141_1442296                         10532   1 -     18505 I
e Allochrocebus_lhoesti.k141_4309873                         20045   1 -     28001 I
e Allenopithecus_nigroviridis.k141_3361533                   20115   1 -     52922 I
e Allactaga_bullata.AllBul_scaffold_9566                     76257   1 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             82133   0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9513228   0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     74725   1 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           835279   0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                      11845 33 +     62944 cataaCGACCT-C---ATCA-GCT--TA-C-AA--g------a----a------------------------------t---ca-------gt---t
s Acinonyx_jubatus.LLWD01001279.1                           835279 15 -   1699592 ----------t-c---acca-agt--ca-c-aa--g-------------------------------------------------------------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 12
s Acomys_cahirinus.AcoCah_scaffold_12655                     74726 24 +     87051 ----------T-C---ATAA-AG---GGTTATG--G------A----A------------------------------A---TA-------CA---C
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 1 I 11
s Ailuropoda_melanoleuca.LNAT01000098.1                    9513228 23 -  29979442 ----------t-c---atca-agt--ta-c-aa--g------a----a------------------------------a---ta-------aa---t
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 7
s Ailurus_fulgens.LNAC01001112.1                             82133 23 -    347723 ----------t-c---atca-agt--ta-c-aa--g------a----a------------------------------a---ta-------aa---t
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 7
s Allactaga_bullata.AllBul_scaffold_9566                     76258 23 -     89534 ----------T-C---ACCA-CA---TGGT-CA--G------A----A------------------------------C---TA-------AA---G
i Allactaga_bullata.AllBul_scaffold_9566                 I 1 I 30
s Allenopithecus_nigroviridis.k141_3361533                   20116 23 -     52922 ----------T-A---ATCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Allenopithecus_nigroviridis.k141_3361533               I 1 C 0
s Allochrocebus_lhoesti.k141_4309873                         20046 23 -     28001 ----------t-c---atCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Allochrocebus_lhoesti.k141_4309873                     I 1 I 6
s Allochrocebus_preussi.k141_1442296                         10533 23 -     18505 ----------T-C---ATCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Allochrocebus_preussi.k141_1442296                     I 1 C 0
s Allochrocebus_solatus.k141_166128                          11399 23 -     12518 ----------t-a---atca-gct--ca-c-aa--g------T----A------------------------------T---CA-------GT---T
i Allochrocebus_solatus.k141_166128                      I 1 C 0
s Alouatta_belzebul.k141_3560514                             11738 23 +     51355 ----------t-c---atca-ggt--tA-C-AA--G------A----A------------------------------T---CA-------GT---T
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                4849 23 -     36483 ----------t-c---atca-ggt--tA-C-AA--G------A----A------------------------------T---CA-------GT---T
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              15301 23 +     28687 ----------t-c---atca-ggt--tA-C-AA--G------A----A------------------------------T---CA-------GT---T
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 3774 23 +     27940 ----------t-c---atca-ggt--ta-c-aa--g------a----a------------------------------t---ca-------gt---t
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            4862 23 -      9457 ----------t-c---atca-ggt--tA-C-AA--G------A----A------------------------------T---CA-------GT---T
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             3820 23 +     30492 ----------t-c---atca-ggt--tA-C-AA--G------A----A------------------------------T---CA-------GT---T
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              8041 23 +     47717 ----------t-c---atca-ggt--tA-C-AA--G------A----A------------------------------T---CA-------GT---T
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              4542 23 +      5663 ----------t-c---atca-ggt--ta-c-aa--g------a----a------------------------------t---ca-------gt---t
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             18993 23 +     50774 ----------t-c---atca-ggt--ta-c-aa--g------a----a------------------------------t---ca-------gt---t
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          680945 23 -   2318259 ----------t-t---atca-agt--ca-a-aa--g------a----a------------------------------a---ta-------ca---c
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 7
s Antilocapra_americana.AntAmePen_scaffold_43303              2212 23 -     32520 ----------t-t---atca-agt--ta-a-aa--g------a----a------------------------------a---ta-------ca---t
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 I 7
s Aotus_azarae.k141_3104676                                  17534 23 -     33861 ----------t-c---atca-ggt--tA-C-AA--G------a----g------------------------------t---ca-------gt---t
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            17532 23 -     34016 ----------T-C---ATCA-GGT--TA-C-AA--G------a----g------------------------------t---ca-------gt---t
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299959 23 -   5030052 ----------T-C---ATCA-GGT--TA-C-AA--G------A----G------------------------------T---Ca-------gt---t
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             17568 23 -     34685 ----------t-c---atca-ggt--tA-C-AA--G------A----G------------------------------T---CA-------GT---T
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               30692 23 -     47192 ----------t-c---atca-ggt--tA-C-AA--G------A----G------------------------------T---CA-------GT---T
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      15945 23 +     20879 ----------T-C---ATCA-GG--CTG-T-AA--G------A----A------------------------------A---TA-------AA---T
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 1 I 13
s Arctocebus_calabarensis.k141_1648548                         650 28 +      5281 ----------C-C---ATCA-AGT--TA-T-AA--G------A----AATA-A-A-----------------------T---TA-------GT---T
i Arctocebus_calabarensis.k141_1648548                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21212220 23 -  21539123 ----------t-c---atca-ggt--ta-c-aa--g------a----a------------------------------t---ca-------gt---t
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               47019 23 -     48001 ----------t-c---atca-ggt--ta-c-aa--g------a----a------------------------------t---ca-------gt---t
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 29820 23 -     30947 ----------t-c---atca-ggt--ta-c-aa--g------a----a------------------------------t---ca-------gt---t
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               11595 23 -     89868 ----------t-c---atca-ggt--ta-c-aa--g------a----a------------------------------t---ca-------gt---t
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              15977 23 -     40414 ----------t-c---atca-ggt--ta-c-aa--g------a----a------------------------------t---ca-------gt---t
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                23865 23 +     72325 ----------t-c---atca-ggt--ta-c-aa--g------a----a------------------------------t---ca-------gt---t
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15195285 23 +  23207421 ----------t-t---atca-agt--ta-a-aa--g------a----a------------------------------a---ta-------aa---t
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 7
s Balaenoptera_bonaerensis.DF707048.1                         5750 23 -     18090 ----------t-t---atca-agt--ta-a-aa--g------a----a------------------------------a---ta-------aa---t
i Balaenoptera_bonaerensis.DF707048.1                    C 0 I 7
s Beatragus_hunteri.BeaHun_scaffold_50177                    32025 23 +     34529 ----------t-t---atca-agt--ca-a-aa--g------a----a------------------------------a---ta-------ta---t
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 7
s Bison_bison.KN261452.1                                    204660 23 -    288883 ----------t-t---atca-agt--ca-a-aa--g------a----a------------------------------a---ta-------ta---t
i Bison_bison.KN261452.1                                 C 0 I 7
s Bos_indicus.CM003047.1                                  20277897 23 +  48749331 ----------t-t---atca-agt--ca-a-aa--g------a----a------------------------------a---ta-------ta---n
i Bos_indicus.CM003047.1                                 C 0 I 7
s Bos_mutus.JH880303.1                                     1130451 23 -   1948126 ----------t-t---atca-agt--ca-a-aa--g------a----a------------------------------a---ta-------ta---t
i Bos_mutus.JH880303.1                                   C 0 I 7
s Bos_taurus.CM000203.6                                   18088535 23 +  45695690 ----------t-t---atca-agt--ca-a-aa--g------a----a------------------------------a---ta-------ta---c
i Bos_taurus.CM000203.6                                  C 0 I 7
s Bubalus_bubalis.KI419123.1                               2824487 21 +   4408762 ----------t-t---atca-agt--ca-a-aa--g------a----a------------------------------a---t---------a---t
i Bubalus_bubalis.KI419123.1                             C 0 I 7
s Cacajao_ayresi.k141_552049                                104854 23 -    122966 ----------t-c---atca-ggt--ta-c-aa--g------a----g------------------------------t---ca-------gt---t
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   64357 23 +     81800 ----------t-c---atca-ggt--tA-C-aa--g------a----g------------------------------t---ca-------gt---t
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  33539 23 -     95584 ----------t-c---atca-ggt--ta-c-aa--g------a----g------------------------------t---ca-------gt---t
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         57639 23 -    119600 ----------t-c---atca-ggt--ta-c-aa--g------a----g------------------------------t---ca-------gt---t
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_10318                               1296 23 +     27907 ----------t-c---atca-ggt--ta-t-AA--G------A----G------------------------------T---CA-------GT---T
i Callibella_humilis.k141_10318                          C 0 C 0
s Callimico_goeldii.k141_737284                                936 23 -     31217 ----------t-c---atca-ggt--tA-C-AA--G------A----G------------------------------T---CA-------GT---T
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                             1232 23 +      5377 ----------t-c---atca-ggt--ta-t-AA--G------A----G------------------------------T---CA-------GT---T
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23593093 23 - 189096842 ----------T-C---ATCA-GGT--TA-T-AA--G------A----G------------------------------T---CA-------GT---T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1907 23 -     12329 ----------t-c---atca-ggt--ta-t-AA--G------A----G------------------------------T---CA-------GT---T
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s CanFam4.chr16                                           17802897 23 -  60362399 ----------t-c---atca-agt--ta-t-aa--g------a----a------------------------------a---ta-------aa---t
i CanFam4.chr16                                          C 0 I 7
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     3643 23 -     43241 ----------t-c---atca-agt--ta-t-aa--g------g----a------------------------------a---ta-------aa---t
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 I 7
s Canis_lupus_dingo.QKWQ01000480.1                         9038338 23 -   9314153 ----------t-c---atca-agt--ta-t-aa--g------g----a------------------------------a---ta-------aa---t
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 7
s Canis_lupus_familiaris.chr16                            17962814 23 -  59632846 ----------t-c---atca-agt--ta-t-aa--g------g----a------------------------------a---ta-------aa---t
i Canis_lupus_familiaris.chr16                           C 0 I 7
s Canis_lupus_orion.HG994398.1                            18504111 23 +  63665305 ----------t-c---atca-agt--ta-t-aa--g------g----a------------------------------a---ta-------aa---t
i Canis_lupus_orion.HG994398.1                           C 0 I 7
s Capra_aegagrus.CM003241.1                               18834970 23 +  46296322 ----------t-t---atca-agt--ca-a-aa--g------a----a------------------------------a---tg-------ca---c
i Capra_aegagrus.CM003241.1                              C 0 I 7
s Capra_hircus.CM004588.1                                 18065771 23 -  44709034 ----------t-t---atca-agt--ca-a-aa--g------a----a------------------------------a---tg-------ca---c
i Capra_hircus.CM004588.1                                C 0 I 7
s Capromys_pilorides.CapPil_scaffold_65020                    3679 13 -     12242 -----------------------------------G------AAATAG------------------------------A---TA-------AG---T
i Capromys_pilorides.CapPil_scaffold_65020               I 10 I 7
s Carlito_syrichta.NW_007259797.1                           158878 27 -    496798 ----------T-C---at----gt--ta-t-aa--g------a----a------------------------------a---taaatgaatat---t
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    140364 22 +    179628 ----------t-c---atca-ag---ta-t-aa--g------a----a------------------------------a---ta-------aa---t
i Castor_canadensis.CasCan_scaffold_2074                 I 1 I 13
s Catagonus_wagneri.CatWag_scaffold_2839                     97422 10 +    217609 ----------a-c---atca-agt--t----------------------------------------------------------------------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 16
s Cavia_aperea.AVPZ01000300.1                             18352245  7 -  23392119 ----------t-c---atca-a---------------------------------------------------------------------------
i Cavia_aperea.AVPZ01000300.1                            C 0 I 23
s Cavia_porcellus.DS562891.1                              18364505  7 -  23407841 ----------t-c---acca-a---------------------------------------------------------------------------
i Cavia_porcellus.DS562891.1                             C 0 I 23
s Cavia_tschudii.CavTsc_scaffold_8919                       103387  7 +    143979 ----------t-c---acca-a---------------------------------------------------------------------------
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 I 23
s Cebuella_pygmaea.k141_793006                                 933 23 -     15088 ----------t-c---atca-ggt--ta-t-AA--G------A----G------------------------------T---CA-------GT---T
i Cebuella_pygmaea.k141_793006                           C 0 C 0
s Cebus_albifrons.Contig27                                25654413 23 +  26074798 ----------t-c---atca-ggt--ta-c-ag--g------a----g------------------------------t---ca-------gt---t
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                2351 23 +     28840 ----------T-C---ATCA-Ggt--ta-c-ag--g------a----g------------------------------t---ca-------gt---t
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 2080 23 +     14051 ----------T-C---ATCA-GGT--TA-C-AG--G------A----G------------------------------T---CA-------GT---T
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         8682 27 +     31688 ----------t-c---at----gt--ta-t-aa--g------a----a------------------------------a---taaatgaatat---t
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12234963 23 +  27778364 ----------t-c---atca-agt--ta-c-ca--g------a----a------------------------------a---ta-------aa---t
i Ceratotherium_simum.JH767749.1                         C 0 I 7
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           5986 23 -     25243 ----------t-c---atca-agt--ta-c-ca--g------a----a------------------------------a---ta-------aa---t
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 I 7
s Cercocebus_atys.KQ010504.1                               4481059 23 +   4669795 ----------T-A---ATCA-GCT--TA-C-AA--G------T----A------------------------------T---ca-------gt---t
i Cercocebus_atys.KQ010504.1                             I 1 C 0
s Cercocebus_chrysogaster.k141_1540778                        5560 23 +     17872 ----------T-A---ATCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Cercocebus_chrysogaster.k141_1540778                   I 1 C 0
s Cercocebus_lunulatus.k141_3342297                           6148 23 -     14043 ----------T-A---ATCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Cercocebus_lunulatus.k141_3342297                      I 1 C 0
s Cercocebus_torquatus.k141_3057011                          14247 23 +     27781 ----------T-A---ATCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------CT---T
i Cercocebus_torquatus.k141_3057011                      I 1 C 0
s Cercopithecus_ascanius.k141_1024104                        14412 23 -     20310 ----------T-A---ATCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Cercopithecus_ascanius.k141_1024104                    I 1 C 0
s Cercopithecus_cephus.k141_1078548                          17385 23 +     29689 ----------T-A---ATCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Cercopithecus_cephus.k141_1078548                      I 1 C 0
s Cercopithecus_diana.k141_1150327                           12144 23 -     20078 ----------t-a---atca-gct--ta-c-aa--g------T----A------------------------------T---CA-------GT---T
i Cercopithecus_diana.k141_1150327                       I 1 C 0
s Cercopithecus_hamlyni.k141_187466                          20058 23 -     27936 ----------T-A---ATCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Cercopithecus_hamlyni.k141_187466                      I 1 C 0
s Cercopithecus_lowei.k141_1854285                            8931 23 -     17152 ----------T-A---ATCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Cercopithecus_lowei.k141_1854285                       I 1 C 0
s Cercopithecus_albogularis.ctg5                                38828658 23 +  39242232 ----------T-A---ATCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Cercopithecus_albogularis.ctg5                               I 1 C 0
s Cercopithecus_mona.ctg39                                21228163 23 -  21565898 ----------T-A---ATCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Cercopithecus_mona.ctg39                               I 1 C 0
s Cercopithecus_neglectus.k141_2526306                       45275 23 -     53127 ----------t-a---atca-gct--ta-c-aa--g------T----A------------------------------T---CA-------GT---T
i Cercopithecus_neglectus.k141_2526306                   I 1 C 0
s Cercopithecus_nictitans.k141_1119862                        5536 23 +     13442 ----------T-A---ATCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Cercopithecus_nictitans.k141_1119862                   I 1 C 0
s Cercopithecus_petaurista.k141_807961                       20078 23 -     27947 ----------T-A---ATCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Cercopithecus_petaurista.k141_807961                   I 1 C 0
s Cercopithecus_pogonias.k141_2303387                         3106 23 +     10558 ----------T-A---ATCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Cercopithecus_pogonias.k141_2303387                    I 1 C 0
s Cercopithecus_roloway.k141_2581234                          6109 23 +     14005 ----------t-a---atca-gct--ta-c-aa--g------T----A------------------------------T---CA-------GT---T
i Cercopithecus_roloway.k141_2581234                     I 1 C 0
s Chinchilla_lanigera.JH722012.1                           1260415 11 +   2543920 -----------------------------------g------aaataa------------------------------N---NN-------N-----
i Chinchilla_lanigera.JH722012.1                         I 4808 I 17
s Chiropotes_albinasus.k141_2206961                           2715 23 -     15524 ----------t-c---atca-ggt--tA-C-AA--G------A----G------------------------------T---CA-------GT---T
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chiropotes_israelita.k141_747660                          101982 23 +    146308 ----------t-c---atca-ggt--ta-c-aa--g------a----g------------------------------t---ca-------gt---t
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          33789 23 -     50570 ----------t-c---atca-ggt--ta-c-aa--g------a----g------------------------------t---ca-------gt---t
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18433980 23 -  18827391 ----------T-C---ATCA-GCT--CA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Chlorocebus_aethiops.ctg25                             I 1 C 0
s Chlorocebus_pygerythrus.k141_1025673                       20477 23 -     50209 ----------t-a---atca-gct--ca-c-aa--g------T----A------------------------------T---CA-------GT---T
i Chlorocebus_pygerythrus.k141_1025673                   I 1 C 0
s Chlorocebus_sabaeus.CM001947.1                         135427483 23 + 135778131 ----------T-A---ATCA-GCT--CA-C-AA--G------T----A------------------------------T---ca-------gt---t
i Chlorocebus_sabaeus.CM001947.1                         I 1 C 0
s Colobus_angolensis.KN981557.1                            1916018 23 +   2368649 ----------T-C---GTCA-GCT--TA-C-AA--G------T----A------------------------------T---Ca-------gt---t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199954259 23 + 200372422 ----------T-C---ATCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              42568 23 +     84244 ----------T-C---ATCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17552925 19 -  53390261 ----------t-c---atca-agt--ta-a-aa--g------a----a------------------------------a---t--------------
i Condylura_cristata.JH655891.1                          C 0 I 11
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           4133 23 +     23735 ----------t-t---tgta-agt--ca-c-aa--a------a----a------------------------------a---ta-------aa---t
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 I 11
s Cricetomys_gambianus.CriGam_scaffold_18520                 54205 23 +     63868 ----------t-c---atca-ag---tgtt-ca--g------a----g------------------------------a---tg-------tg---t
i Cricetomys_gambianus.CriGam_scaffold_18520             I 1 I 11
s Cricetulus_griseus.LT883664.1                           11669728 23 + 224834208 ----------t-c---atca-ag---tgtt-ag--g------a----a------------------------------a---ta-------ca---t
i Cricetulus_griseus.LT883664.1                          I 1 I 11
s Crocidura_indochinensis.CroInd_scaffold_37019               6983  8 -     19598 ----------T-C---ATCAAC---------------------------------------------------------------------------
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 I 12
s Cryptoprocta_ferox.CryFer_flattened_line_16129             31831 15 -     87169 ----------t-c---atca-agt--ca-c-aa--g-------------------------------------------------------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 12
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  38599 13 +     51376 -----------------------------------G------AAATAA------------------------------G---TG-------AA---T
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 10 I 7
s Dasyprocta_punctata.DasPun_flattened_line_15900             3222 19 -     75252 -----------------------------------gtattaggaataa------------------------------a---ta-------ag---t
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 10 I 7
s Delphinapterus_leucas.KZ290073.1                        16815160 23 +  35494412 ----------t-t---atca-agt--ta-a-aa--g------a----a------------------------------a---ta-------aa---t
i Delphinapterus_leucas.KZ290073.1                       C 0 I 7
s Dicerorhinus_sumatrensis.PEKH010002091.1                  676805 23 +   1390856 ----------t-c---atca-agt--ta-c-ca--g------a----a------------------------------a---ta-------aa---t
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 7
s Diceros_bicornis.DicBicMic_scaffold_5955                    9565 23 +    198055 ----------t-c---atca-agt--ta-c-ca--g------a----a------------------------------a---ta-------aa---t
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 7
s Dinomys_branickii.DinBra_scaffold_21862                    43744 11 +     67921 -----------------------------------g------aaataa------------------------------a---tc-------a-----
i Dinomys_branickii.DinBra_scaffold_21862                I 4687 I 17
s Dolichotis_patagonum.DolPat_scaffold_30833                 35939  7 -     42551 ----------t-c---atca-a---------------------------------------------------------------------------
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 I 23
s Eidolon_helvum.KE797349.1                                   1047 23 -     31197 ----------t-c---atta-agt--ta-t-aa--a------a----a------------------------------a---ta-------aa---t
i Eidolon_helvum.KE797349.1                              C 0 I 11
s Elaphurus_davidianus.JRFZ01104969.1                       315427 23 +    607251 ----------t-t---acca-agt--ta-a-aa--g------a----a------------------------------a---ta-------tg---t
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 7
s Ellobius_lutescens.LOEQ01008920.1                          25088 23 -    110024 ----------T-C---ATCA-AG---TGTT-AG--A------A----A------------------------------A---CA-------TA---T
i Ellobius_lutescens.LOEQ01008920.1                      I 1 I 11
s Ellobius_talpinus.LOJH01081419.1                            5018 23 +      8657 ----------t-t---atca-ag---tGTT-AG--A------A----A------------------------------A---CA-------TA---T
i Ellobius_talpinus.LOJH01081419.1                       I 1 I 11
s Enhydra_lutris.KZ291758.1                               16339350 16 -  41312741 ----------t-c---acca-agt--ta-c-aa--t------a------------------------------------------------------
i Enhydra_lutris.KZ291758.1                              C 0 I 10
s Eptesicus_fuscus.JH977646.1                              2151079 23 -  14770903 ----------t-c---atca-ggt--ta-t-aa--g------a----a------------------------------a---ta-------ag---t
i Eptesicus_fuscus.JH977646.1                            C 0 I 362
s Equus_asinus.JREZ01000139.1                              1287099 23 +   4378816 ----------t-c---ggca-agt--ta-c-ag--g------a----a------------------------------a---ca-------aa---t
i Equus_asinus.JREZ01000139.1                            C 0 I 7
s Equus_caballus.CM000403.2                               18534907 23 -  39960074 ----------t-c---ggca-agt--ta-c-ag--g------a----a------------------------------a---ca-------ag---t
i Equus_caballus.CM000403.2                              C 0 I 7
s Equus_przewalskii.KK951119.1                               36936 23 +    498745 ----------t-c---ggca-agt--ta-c-ag--g------a----a------------------------------a---ca-------ag---t
i Equus_przewalskii.KK951119.1                           C 0 I 7
s Erythrocebus_patas.Contig38                             21210652 23 -  21539334 ----------t-c---atCA-GCT--CA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           14583 23 +    133382 ----------t-t---atca-agt--ta-a-aa--g------a----a------------------------------a---ta-------aa---t
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 7
s Eubalaena_japonica.EubJap_flattened_line_31514             28529 23 -     44125 ----------t-t---atca-agt--ta-a-aa--g------a----a------------------------------a---ta-------aa---t
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 I 7
s Felis_catus.CM001381.2                                  20240411 15 + 206538554 ----------t-c---acca-agt--ca-c-aa--g-------------------------------------------------------------
i Felis_catus.CM001381.2                                 C 0 I 12
s Felis_catus_fca126.CM031415.1                           20199282 15 + 205367284 ----------t-c---acca-agt--ca-c-aa--g-------------------------------------------------------------
i Felis_catus_fca126.CM031415.1                          C 0 I 12
s Felis_nigripes.FelNig_flattened_line_20823                 12943 15 -     36744 ----------t-c---acca-agt--ca-c-aa--g-------------------------------------------------------------
i Felis_nigripes.FelNig_flattened_line_20823             C 0 I 12
s Fukomys_damarensis.KN121974.1                             853024 27 +   3816255 ----------t-c---atca-ag-tg-g-t-aa--g------aaataa------------------------------a---tg-------ag---t
i Fukomys_damarensis.KN121974.1                          I 3 I 7
s Galago_moholi.ctg2040                                     429827 51 -    453645 ----------------ATCA-AGT--TA-T-AA--G------A----AATATACATTTTTTTATATATCATTCATACTC---AA-------GT---T
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             7519 53 +     11339 ----------T-A---ATCA-AGT--TA-C-AA--G------A----AATATACATTTTTTTATATATCATTCACACTC---AA-------GT---T
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            4808 10 +     41679 ----------T-C---ATCA-AGT--T----------------------------------------------------------------------
i Galagoides_demidoff.k141_1711393                       C 0 I 9
s Galeopterus_variegatus.GalVar_scaffold_108840               6053 23 -      9135 ----------t-c---atca-act--tg-t-AA--G------A----C------------------------------A---TA-------AA---A
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 I 109
s Giraffa_tippelskirchi.LVKQ01S007888.1                     612669 23 -    660261 ----------t-t---atca-agt--ta-a-aa--g------a----a------------------------------a---ta-------ta---t
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 I 7
s Glis_glis.GliGli_scaffold_19807                            35767 23 +     49224 ----------t-c---acta-ag--cta-t-aa--g------a----a------------------------------a---ta-------tg---t
i Glis_glis.GliGli_scaffold_19807                        I 1 I 14
s Gorilla_beringei.k141_2066350                               1232 33 +      1742 CATAACGACCT-C---ATCA-GCT--TA-C-AA--G------A----A------------------------------T---CA-------GT---T
i Gorilla_beringei.k141_2066350                          C 0 I 103
s Gorilla_gorilla.CYUI03001204.1                             18660 33 -     63219 cataacgACCT-C---ATCA-GCT--TA-C-AA--G------A----A------------------------------T---Ca-------gt---t
i Gorilla_gorilla.CYUI03001204.1                         C 0 I 12
s Graphiurus_murinus.GraMur_scaffold_10447                   37390 23 +     78134 ----------c-a---atca-ag--cta-c-ag--g------a----a------------------------------a---ta-------ca---t
i Graphiurus_murinus.GraMur_scaffold_10447               I 1 I 14
s Helogale_parvula.HelPar_flattened_line_2585               245642 15 +    327341 ----------t-c---gtca-agt--ca-c-aa--g-------------------------------------------------------------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 12
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 23264 23 +     36099 ----------t-t---atca-agt--ca-a-aa--g------a----a------------------------------a---ta-------ca---t
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 I 7
s Hippopotamus_amphibius.HipAmp_scaffold_9076               114005 23 +    128679 ----------t-t---atca-agt--ta-a-aa--g------a----a------------------------------a---ta-------aa---t
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 I 7
s Hipposideros_armiger.JXIK01000431.1                       113803 23 +   1711038 ----------t-c---atta-agt--ta-t-aa--g------a----a------------------------------a---ta-------aa---t
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 13
s Hipposideros_galeritus.HipGal_scaffold_101188               2369 23 +      9903 ----------t-c---atta-agt--ta-t-aa--g------a----a------------------------------a---ta-------aa---t
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 I 13
s Hoolock_leuconedys.ctg274                                    440331 23 +    630532 ----------t-c---atCA-GCC--TA-G-AA--G------A----A------------------------------T---CA-------GT---T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            27349 10 -    143317 -----------------------------------------------a------------------------------ataata-------ag---t
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 16 I 7
s Hyaena_hyaena.HyaHya_flattened_line_26932                  48602 15 +     55795 ----------T-C---ATCC-AGT--CA-C-AA--G-------------------------------------------------------------
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 I 8
s Hystrix_cristata.HysCri_scaffold_5660                      85496 27 +    135385 ----------t-c---atca-ag-tg-g-t-aa--g------a----a------------------------------a---caaa-g--gag---t
i Hystrix_cristata.HysCri_scaffold_5660                  I 3 I 7
s Ictidomys_tridecemlineatus.JH393364.1                    7525546 11 -   7955117 -------------------------------aa--g------a----a------------------------------a---ta-------aa---t
i Ictidomys_tridecemlineatus.JH393364.1                  I 11 I 13
s Inia_geoffrensis.IniGeo_flattened_line_34779                2367 23 -     31341 ----------t-t---atca-agt--ta-a-aa--g------a----a------------------------------a---ta-------aa---t
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 I 7
s Jaculus_jaculus.JH725527.1                               8279009 23 -   9596543 ----------T-C---ACCA-CA---TGTT-CA--G------A----A------------------------------C---TA-------AA---A
i Jaculus_jaculus.JH725527.1                             I 1 I 12
s Kogia_breviceps.KogBre_flattened_line_81059                 2106 23 -     18011 ----------t-t---atca-agt--ta-a-aa--g------a----a------------------------------a---ta-------aa---t
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 I 7
s Lagothrix_lagothricha.k141_1005387                         18036 23 -     38430 ----------t-c---atca-ggt--ta-c-aa--g------a----a------------------------------t---ca-------gt---t
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    20733 23 -     42476 ----------t-c---atca-ggt--ta-t-aa--g------a----a------------------------------a---ta-------ag---t
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 133
s Leontocebus_fuscicollis.k141_1820339                        9671 23 +     64341 ----------t-c---atca-ggt--tA-C-AA--G------A----G------------------------------T---CA-------GT---T
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           2013 23 -     35062 ----------t-c---atca-ggt--tA-C-AA--G------A----G------------------------------T---CA-------GT---T
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        9700 23 +     35603 ----------t-c---atca-ggt--tA-C-AA--G------A----G------------------------------T---CA-------GT---T
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    31316 23 +     38576 ----------t-c---atca-ggt--tA-C-AA--G------A----G------------------------------T---CA-------GT---T
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         28020 23 +     66356 ----------t-c---atca-ggt--tA-C-AA--G------A----G------------------------------T---CA-------GT---T
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3059283 23 +   3914936 ----------t-c---atca-aat--ta-c-aa--g------a----a------------------------------a---ta-------aa---t
i Leptonychotes_weddellii.KB714746.1                     C 0 I 7
s Lipotes_vexillifer.KE559953.1                             271638 23 -    662738 ----------t-t---atca-agt--ta-a-aa--g------a----a------------------------------a---ta-------aa---t
i Lipotes_vexillifer.KE559953.1                          C 0 I 7
s Lophocebus_aterrimus.ctg367                              1442608 23 +   1826925 ----------T-A---ATCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Lophocebus_aterrimus.ctg367                            I 1 C 0
s Loris_lydekkerianus.k141_399337                            17851 28 -     33856 ----------T-C---ATCA-AGT--TA-C-AA--G------A----AATA-A-A-----------------------T---TA-------GT---T
i Loris_lydekkerianus.k141_399337                        C 0 C 0
s Loris_tardigradus.ctg83                                  1015562 28 +   6120653 ----------T-C---ATCA-AGT--TA-C-AA--G------A----AATA-A-A-----------------------T---TA-------GT---T
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17959054 23 -  59628241 ----------t-c---atca-agt--ta-t-aa--g------a----a------------------------------a---ta-------aa---t
i Lycaon_pictus.CM007581.1                               C 0 I 7
s Macaca_arctoides.k141_2326796                              12419 23 +     40492 ----------T-A---ATCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Macaca_arctoides.k141_2326796                          I 1 C 0
s Macaca_assamensis.Contig5                               59681666 23 +  60120075 ----------T-A---ATCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Macaca_assamensis.Contig5                              I 1 C 0
s Macaca_cyclopis.k119_18836                                 18215 23 -     26193 ----------T-A---ATCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Macaca_cyclopis.k119_18836                             I 1 C 0
s Macaca_fascicularis.k141_814140                            85990 23 -    114318 ----------t-a---atca-gct--ta-c-aa--g------T----A------------------------------T---CA-------GT---T
i Macaca_fascicularis.k141_814140                        I 1 C 0
s Macaca_fuscata.k119_255327                                 11681 23 -     23192 ----------T-A---ATCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Macaca_fuscata.k119_255327                             I 1 C 0
s Macaca_leonina.k141_3550399                                21146 23 -     29190 ----------T-A---ATCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Macaca_leonina.k141_3550399                            I 1 C 0
s Macaca_maura.k141_2733130                                  29725 23 +     37952 ----------T-A---ATCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Macaca_maura.k141_2733130                              I 1 C 0
s Macaca_mulatta.NC_041758.1                             186844798 23 + 187317192 ----------T-A---ATCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------Gt---t
i Macaca_mulatta.NC_041758.1                             I 1 C 0
s Macaca_nemestrina.KQ007038.1                            25463379 23 -  25927173 ----------T-A---ATCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------Gt---t
i Macaca_nemestrina.KQ007038.1                           I 1 C 0
s Macaca_nigra.k141_1655396                                  85583 23 +     89720 ----------T-A---ATCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Macaca_nigra.k141_1655396                              I 1 C 0
s Macaca_radiata.k141_3680011                                12595 23 +     20474 ----------T-A---ATCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Macaca_radiata.k141_3680011                            I 1 C 0
s Macaca_siberu.k141_635500                                  12369 23 -     14993 ----------T-A---ATCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Macaca_siberu.k141_635500                              I 1 C 0
s Macaca_silenus.Contig273                                  335232 23 -    668171 ----------T-A---ATCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Macaca_silenus.Contig273                               I 1 C 0
s Macaca_thibetana.k99_256239                                10656 23 -     24072 ----------T-A---ATCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Macaca_thibetana.k99_256239                            I 1 C 0
s Macaca_tonkeana.k141_1498238                               31290 23 -     45290 ----------T-A---ATCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Macaca_tonkeana.k141_1498238                           I 1 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                  6089 23 +    270270 ----------t-c---atca-act--ta-t-aa--a------g----a------------------------------a---ta-------aa---t
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 6
s Mandrillus_leucophaeus.scaffold280                      23942881 23 -  24302211 ----------T-A---ATCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Mandrillus_leucophaeus.scaffold280                     I 1 C 0
s Mandrillus_sphinx.Contig270                               356989 23 +    752769 ----------t-a---atca-gct--ta-c-aa--g------T----A------------------------------T---CA-------GT---T
i Mandrillus_sphinx.Contig270                            I 1 C 0
s Marmota_marmota.CZRN01000018.1                          33106619 10 -  40650429 ----------t-c---atca-aa--ct----------------------------------------------------------------------
i Marmota_marmota.CZRN01000018.1                         I 1 I 24
s Megaderma_lyra.MegLyr_scaffold_4542                        16657 23 -    207569 ----------t-c---actg-att--ta-t-aa--c------a----a------------------------------g---ta-------aa---t
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 11
s Mellivora_capensis.MelCap_flattened_line_69365             12928 23 +     13704 ----------t-c---atca-agt--ta-c-aa--t------a----a------------------------------a---ta-------aa---t
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 I 7
s Meriones_unguiculatus.MerUng_scaffold_7390                 37671 23 +    140813 ----------t-c---atca-ag---tgtt-ta--g------a----a------------------------------a---ta-------ca---t
i Meriones_unguiculatus.MerUng_scaffold_7390             I 1 I 11
s Mesoplodon_bidens.MesBid_scaffold_108144                    6796 23 +     10310 ----------t-t---atca-agt--ta-a-aa--g------a----a------------------------------a---ta-------aa---t
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 I 7
s Mico_argentatus.k141_1024458                                 932 23 -     20047 ----------t-c---atca-ggt--ta-t-AA--G------A----G------------------------------T---CA-------GT---T
i Mico_argentatus.k141_1024458                           C 0 C 0
s Mico_humeralifer.k141_1346949                               1345 23 +      1399 ----------t-c---atca-ggt--ta-t-AA--G------A----G------------------------------T---CA-------GT---T
i Mico_humeralifer.k141_1346949                          C 0 C 0
s Mico_schneideri.k141_916733                                        932 23 +      5107 ----------t-c---atca-ggt--ta-t-AA--G------A----G------------------------------T---CA-------GT---T
i Mico_schneideri.k141_916733                                  C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1853837 23 +   8254450 ----------t-t---atca-agt--ta-t-aa--g------a----a------------------------------a---ta-------ag---c
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 130
s Miniopterus_schreibersii.MinSch_scaffold_18080             37515 23 +     64694 ----------t-t---atca-agt--ta-t-aa--g------a----a------------------------------a---ta-------ag---c
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 130
s Miopithecus_ogouensis.k141_534055                          14561 23 -     28506 ----------T-A---ATCA-GCT--TC-C-AA--G------T----A------------------------------T---CA-------GT---T
i Miopithecus_ogouensis.k141_534055                      I 1 C 0
s Mirounga_angustirostris.MirAng_flattened_line_55178          452 23 +     26817 ----------t-c---atca-aat--ta-c-aa--g------a----a------------------------------a---ta-------aa---t
i Mirounga_angustirostris.MirAng_flattened_line_55178    C 0 I 7
s Monodon_monoceros.MonMon_M_scaffold_103                    30544 23 -    437263 ----------t-t---atca-agt--ta-a-aa--g------a----a------------------------------a---ta-------aa---t
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 7
s Mormoops_blainvillei.MorMeg_scaffold_1417                 144546 25 -    366855 ------------ccttatta-aat--ta-t-aa--g------a----a------------------------------a---ta-------aa---t
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 11
s Moschus_moschiferus.MosMos_scaffold_13123                   4851 23 +     82753 ----------t-t---atca-agt--ta-a-aa--g------a----a------------------------------a---ta-------ta---t
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 7
s Mungos_mungo.MunMun_flattened_line_40893                     649 15 +      5729 ----------t-c---atca-agt--ca-c-aa--g-------------------------------------------------------------
i Mungos_mungo.MunMun_flattened_line_40893               C 0 I 12
s Murina_feae.MurFea_scaffold_85699                          11094 23 +     14753 ----------t-c---atcg-ggt--tg-t-aa--g------a----a------------------------------a---ta-------ag---t
i Murina_feae.MurFea_scaffold_85699                      C 0 I 130
s Mus_caroli.LT608237.1                                   84365255 21 - 120012414 ----------------ATCA-AG---TGTT-TG--G------A----A------------------------------A---TA-------CT---T
i Mus_caroli.LT608237.1                                  C 0 I 11
s Mus_musculus.chr8                                       87654659 21 - 129401213 ----------------ATCA-AG---TGTT-TG--G------A----A------------------------------A---TA-------CT---T
i Mus_musculus.chr8                                      C 0 I 11
s Mus_pahari.LT608297.1                                   31359362 21 -  89631738 ----------------ATCA-AG---TGTT-TG--G------A----A------------------------------A---TA-------CT---T
i Mus_pahari.LT608297.1                                  C 0 I 11
s Mus_spretus.CM004101.1                                  90757446 21 - 130317789 ----------------ATCA-AG---TGTT-TG--G------A----A------------------------------A---TA-------CT---T
i Mus_spretus.CM004101.1                                 C 0 I 11
s Muscardinus_avellanarius.MusAve_scaffold_82313              9235 23 +     14296 ----------t-c---atca-ag--cta-t-aa--g------a----a------------------------------a---ta-------ca---t
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 1 I 14
s Mustela_putorius.JH418006.1                               304426 23 -  14710649 ----------t-c---atca-agt--ta-c-aa--t------a----a------------------------------a---ta-------aa---t
i Mustela_putorius.JH418006.1                            C 0 I 7
s Myocastor_coypus.MyoCoy_scaffold_10123                     73856 13 -     80779 -----------------------------------g------aaataa------------------------------a---tc-------ag---t
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 10 I 7
s Myotis_brandtii.KE162005.1                                284576 23 -  10118263 ----------t-c---atca-agt--ta-t-ag--g------a----a------------------------------a---ta-------aa---t
i Myotis_brandtii.KE162005.1                             C 0 I 133
s Myotis_davidii.KB100139.1                                1591894 23 -   6019432 ----------t-c---atca-agt--ta-t-ag--g------a----a------------------------------a---ta-------aa---t
i Myotis_davidii.KB100139.1                              C 0 I 133
s Myotis_lucifugus.GL429869.1                              3907995 23 -   4330536 ----------t-c---atca-agt--ta-t-ag--g------a----a------------------------------a---ta-------aa---t
i Myotis_lucifugus.GL429869.1                            C 0 I 132
s Myotis_myotis.MyoMyo_scaffold_44643                         2549 20 +     25416 -----------------tca-agt--ta-t-ag--g------a----a------------------------------a---ta-------aa---t
i Myotis_myotis.MyoMyo_scaffold_44643                    I 14 I 133
s Nannospalax_galili.KL204047.1                            2040210 20 -   3037898 ----------t-c---aaca-ag---tgtt-aa--g------a----a------------------------------g---aa-------------
i Nannospalax_galili.KL204047.1                          I 1 I 7
s Nasalis_larvatus.k141_413338                               20625 23 +     21681 ----------t-c---atCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20310223 23 +  31847680 ----------t-c---atca-aat--ta-c-aa--g------a----a------------------------------a---ta-------aa---t
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 7
s Neophocaena_asiaeorientalis.KZ687982.1                   5869509 23 +   7148211 ----------t-t---atca-agt--ta-a-aa--g------a----a------------------------------a---ta-------aa---t
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 7
s Noctilio_leporinus.NocLep_scaffold_251                    760775 22 +    783361 ------------c---acca-agt--tg-t-ac--a------a----a------------------------------a---ta-------aa---t
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 11
s Nyctereutes_procyonoides.CAJHUB010000658.1               9152971 23 -   9404916 ----------t-c---atca-agt--ta-t-aa--g------a----a------------------------------a---ta-------aa---t
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 7
s Nycticebus_bengalensis.LG01                            102596066 28 - 196305487 ----------T-C---ATCA-AGT--TA-C-AA--G------A----AATA-A-A-----------------------T---TA-------GT---T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1514628                             1533 28 -      5837 ----------T-C---ATCA-AGT--TA-C-AA--G------A----AATA-A-A-----------------------T---TA-------GT---T
i Nycticebus_coucang.k141_1514628                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105771988 28 + 199412804 ----------T-C---ATCA-AGT--TA-C-AA--G------A----AATA-A-A-----------------------T---TA-------GT---T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1368251 23 +   3988456 ----------T-G---ATTA-AAT--CA-T-AA--G------G----A------------------------------A---AA-------AC---T
i Ochotona_princeps.JH802162.1                           C 0 I 11
s Odobenus_rosmarus.KB229312.1                              509048 23 -   2017862 ----------t-c---atca-agt--ta-c-aa--g------a----a------------------------------a---ta-------aa---t
i Odobenus_rosmarus.KB229312.1                           C 0 I 7
s Odocoileus_virginianus.KZ100018.1                         148227 23 +    630418 ----------t-t---atca-agt--ta-a-aa--g------a----a------------------------------a---ta-------ta---t
i Odocoileus_virginianus.KZ100018.1                      C 0 I 7
s Okapia_johnstoni.LVCL01S0005463.1                          82615 23 -    150152 ----------t-t---atca-agt--ta-a-aa--g------a----a------------------------------a---ta-------ta---t
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 7
s Onychomys_torridus.OnyTor_scaffold_2986                    84538 23 +    102263 ----------T-C---ATCA-AA---TGTT-AG--G------A----A------------------------------G---TA-------CA---C
i Onychomys_torridus.OnyTor_scaffold_2986                I 1 I 11
s Orcinus_orca.KB316932.1                                  2785400 23 -  10937097 ----------t-t---atca-agt--ta-a-aa--g------a----a------------------------------a---ta-------aa---t
i Orcinus_orca.KB316932.1                                C 0 I 7
s Otocyon_megalotis.JAEUCK010005147.1                       466396 23 -    559221 ----------t-c---atca-agt--ta-t-aa--g------a----a------------------------------a---ta-------aa---t
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 7
s Otolemur_crassicaudatus.k141_222918                         7321 17 +      8798 ----------T-A---ATCA-AAT--TA-T-AA--G------A----A-------------------------------------------------
i Otolemur_crassicaudatus.k141_222918                    C 0 I 28
s Otolemur_garnettii.GL873799.1                             699560 17 -   1103335 ----------T-A---atca-aat--ta-t-aa--g------a----a-------------------------------------------------
i Otolemur_garnettii.GL873799.1                          C 0 I 28
s Ovis_aries.CM001607.2                                   17591063 23 +  44047080 ----------t-t---atca-agt--ca-a-aa--g------a----a------------------------------a---ta-------ca---t
i Ovis_aries.CM001607.2                                  C 0 I 7
s Ovis_canadensis.OviCan_scaffold_2572                      179214 23 -    191736 ----------t-t---atca-agt--ca-a-aa--g------a----a------------------------------a---ta-------ca---t
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 I 7
s Pan_paniscus.KQ411613.1                                    49177 33 +     80009 catAACGACCT-C---ATCA-GCT--TA-C-AA--G------A----A------------------------------T---Ca-------gt---t
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189148039 33 + 189151597 cataacGACCT-C---ATCA-GCT--TA-C-AA--G------A----A------------------------------T---Ca-------gt---t
i Pan_troglodytes.CM009242.2                             I 300 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  154465 15 +    230217 ----------t-a---acca-agt--ca-c-aa--g-------------------------------------------------------------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 12
s Panthera_pardus.KV860321.1                                267781 15 +  18783137 ----------t-a---acca-agt--ca-c-aa--g-------------------------------------------------------------
i Panthera_pardus.KV860321.1                             C 0 I 12
s Panthera_tigris.KE722367.1                               4724601 15 -   8748460 ----------t-a---acca-agt--ca-c-aa--g-------------------------------------------------------------
i Panthera_tigris.KE722367.1                             C 0 I 12
s Pantholops_hodgsonii.KE114653.1                          1269944 23 -   2937107 ----------t-t---atca-agt--ca-a-aa--g------a----a------------------------------a---ta-------ca---t
i Pantholops_hodgsonii.KE114653.1                        C 0 I 7
s Papio_anubis.CM001495.2                                183448800 24 + 183742232 ------------A---ATAC-GCT--TA-C-GAAGG------T----A------------------------------T---CA-------GT---T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            12328 23 +     20448 ----------T-A---ATCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Papio_cynocephalus.k141_4307930                        I 1 C 0
s Papio_hamadryas.Contig39                                20569139 23 +  20919399 ----------t-a---atca-gct--ta-c-aa--g------T----A------------------------------T---CA-------GT---T
i Papio_hamadryas.Contig39                               I 1 C 0
s Papio_kindae.k141_1936966                                  11085 23 +     41871 ----------T-A---ATCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Papio_kindae.k141_1936966                              I 1 C 0
s Papio_papio.k141_802527                                    14363 23 +     27711 ----------T-A---ATCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Papio_papio.k141_802527                                I 1 C 0
s Papio_ursinus.k141_5274964                                  5362 23 -     11374 ----------T-A---ATCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Papio_ursinus.k141_5274964                             I 1 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15862 15 -     78924 ----------t-c---atca-agt--cc-c-at--g-------------------------------------------------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 12
s Perodicticus_ibeanus.k141_1182643                            331 28 -      3244 ----------T-C---ATCA-AGT--TA-C-AA--G------A----AATA-A-A-----------------------T---TA-------GT---T
i Perodicticus_ibeanus.k141_1182643                      C 0 C 0
s Perodicticus_potto.k141_1186926                              709 28 +     10374 ----------T-C---ATCA-AGT--TA-C-AA--G------A----AATA-A-A-----------------------T---TA-------GT---T
i Perodicticus_potto.k141_1186926                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18215245 23 -  18517816 ----------T-C---ACCA-AG---TGTT-AG--A------A----A------------------------------A---TA-------CA---C
i Peromyscus_maniculatus.KI615324.1                      I 1 I 11
s Petromus_typicus.PetTyp_scaffold_221660                     1266 27 -      2102 ----------T-C---ATCA-AG-TG-a-t-aa--g------aaataa------------------------------a---ta-------ag---a
i Petromus_typicus.PetTyp_scaffold_221660                I 3 I 296
s Phocoena_phocoena.PhoPho_flattened_line_24159              12471 23 +     63832 ----------c-t---atca-agt--ta-a-aa--g------a----a------------------------------a---ta-------aa---t
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 7
s Piliocolobus_badius.k141_1142974                            3729 23 +     68526 ----------t-c---atCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        43866 23 +     89929 ----------t-c---atCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            45282 23 +     51399 ----------t-c---atCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14301518 23 -  14605196 ----------T-C---ATCA-GCT--TA-C-AA--G------T----A------------------------------T---ca-------gt---t
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             5875 23 +     22620 ----------t-c---atca-ggt--tA-A-AA--G------A----A------------------------------A---TA-------AG---T
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 128
s Pithecia_albicans.k141_1476471                              7254 23 +     26961 ----------t-c---atca-ggt--tA-c-aa--g------a----g------------------------------t---ca-------gt---t
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          3381 23 +     23417 ----------t-c---atca-ggt--ta-c-aa--g------a----g------------------------------t---ca-------gt---t
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                7246 23 +     29694 ----------t-c---atca-ggt--tA-C-AA--G------A----g------------------------------t---ca-------gt---t
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          32272 23 +     52772 ----------t-c---atca-ggt--ta-c-aa--g------a----g------------------------------t---ca-------gt---t
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           7268 23 +     26198 ----------t-c---atca-ggt--ta-c-aa--g------a----g------------------------------t---ca-------gt---t
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3943798 23 +   4542175 ----------t-c---atca-ggt--tA-C-AA--G------A----G------------------------------T---CA-------GT---T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            7232 23 -     23490 ----------t-c---atca-ggt--ta-c-aa--g------a----g------------------------------t---ca-------gt---t
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610           2007 23 +      7680 ----------t-t---atca-agt--ta-a-aa--g------a----a------------------------------a---ta-------aa---t
i Platanista_gangetica.PlaMin_flattened_line_173610      C 0 I 7
s Plecturocebus_bernhardi.k141_2549090                       11498 23 -     39866 ----------t-c---atca-ggt--ta-c-aa--g------a----g------------------------------t---ca-------gt---t
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        20661 23 +     34906 ----------t-c---atca-ggt--ta-c-aa--g------a----a------------------------------t---ca-------gt---t
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       24923 23 +     87950 ----------t-c---atca-ggt--ta-c-aa--g------a----a------------------------------t---ca-------gt---t
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     25750 23 +     88961 ----------t-c---atca-ggt--ta-c-aa--g------a----a------------------------------t---ca-------gt---t
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         11420 23 +     39403 ----------t-c---atca-ggt--ta-c-aa--g------a----a------------------------------t---ca-------gt---t
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          25203 23 -     87928 ----------t-c---atca-ggt--ta-c-aa--g------a----a------------------------------t---ca-------gt---t
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         32165 23 +     60166 ----------t-c---atca-ggt--ta-c-aa--g------a----g------------------------------t---ca-------gt---t
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      32361 23 +     67232 ----------t-c---atca-ggt--ta-c-aa--g------a----g------------------------------t---ca-------gt---t
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          27834 23 +     90634 ----------t-c---atca-ggt--ta-c-aa--g------a----g------------------------------t---ca-------gt---t
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          25207 23 -     89403 ----------t-c---atca-ggt--ta-c-aa--g------a----g------------------------------t---ca-------gt---t
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189136655 23 + 189387572 ----------T-T---ATCA-GCT--TA-C-AA--G------A----A------------------------------T---ca-------gt---t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9576265 23 +   9816681 ----------t-t---atca-gct--TA-C-AA--G------A----A------------------------------T---CA-------GT---T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               78806 23 -     81375 ----------t-c---atCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                             10642 23 +     19060 ----------t-c---atCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            15277 23 -     21651 ----------t-c---ttca-ag---tgtt-ca--g------a----a------------------------------a---ta-------ca---t
i Psammomys_obesus.NESX01036370.1                        I 1 I 11
s Pteronotus_parnellii.KE909381.1                            18098 25 -     21811 ------------cctcatta-agt--ta-a-aa--g------a----a------------------------------a---tc-------ag---t
i Pteronotus_parnellii.KE909381.1                        C 0 I 11
s Pteronura_brasiliensis.PteBra_flattened_line_76658          1283 23 -      3818 ----------t-c---acca-agt--ta-c-aa--t------a----a------------------------------a---ta-------aa---t
i Pteronura_brasiliensis.PteBra_flattened_line_76658     C 0 I 7
s Pteropus_alecto.KB030862.1                              22987494 23 +  28871421 ----------t-t---atta-agt--ta-t-aa--a------a----a------------------------------a---ta-------aa---t
i Pteropus_alecto.KB030862.1                             C 0 I 11
s Pteropus_vampyrus.KN525825.1                             1371054 23 +   4952924 ----------t-t---atta-agt--ta-t-aa--a------a----a------------------------------a---ta-------aa---t
i Pteropus_vampyrus.KN525825.1                           C 0 I 11
s Puma_concolor.QAVW01001104.1                            20277671 15 -  38429054 ----------t-c---acca-agt--ca-c-aa--g-------------------------------------------------------------
i Puma_concolor.QAVW01001104.1                           C 0 I 12
s Pygathrix_cinerea.k141_1153803                             20619 23 -     91421 ----------t-c---atCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7614744 23 +   7812017 ----------t-c---atCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             20649 23 -     72585 ----------t-c---atCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                 10063 23 +     55207 ----------t-t---atca-agt--ta-a-aa--g------a----a------------------------------a---ta-------ta---t
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 7
s Rattus_norvegicus.chr16                                 53574680 23 +  90668790 ----------T-C---ACCA-AA---TATT-TG--G------A----A------------------------------A---TA-------CA---T
i Rattus_norvegicus.chr16                                I 1 I 11
s Rhinolophus_sinicus.LVEH01000134.1                        370251 23 -   3329780 ----------t-c---atta-agt--ta-t-aa--g------a----a------------------------------g---ta-------aa---t
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 11
s Rhinopithecus_bieti.k119_1041714                            1212 23 +      5697 ----------t-c---atCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Rhinopithecus_bieti.k119_1041714                       C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91241685 23 - 195417433 ----------T-C---ATCA-GCT--TA-C-AA--G------T----A------------------------------T---ca-------gt---t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7677334 23 +   7961872 ----------t-c---atCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_121563                 326 24 +      1157 ----------t-c---atta-agt--ta-t-aa--a-a----a----a------------------------------a---ta-------aa---t
i Rousettus_aegyptiacus.RouAeg_scaffold_121563           C 0 I 11
s Saguinus_bicolor.k141_8081                                  2980 23 +     42994 ----------t-c---atca-ggt--tA-C-AA--G------A----G------------------------------T---CA-------GT---T
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                             1655 23 +      2253 ----------t-c---atca-ggt--tA-C-AA--G------A----G------------------------------T---CA-------GT---T
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               2104 23 -      8737 ----------t-c---atca-ggt--tA-C-AA--G------A----G------------------------------T---CA-------GT---T
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                              1736 23 +      2343 ----------t-c---atca-ggt--tA-C-AA--G------A----G------------------------------T---CA-------GT---T
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209476637 23 + 209938924 ----------t-c---atca-ggt--tA-C-AA--G------A----G------------------------------T---CA-------GT---T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                1063 23 -      7576 ----------t-c---atca-ggt--tA-C-AA--G------A----G------------------------------T---CA-------GT---T
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_133311                       2521 23 +      9503 ----------t-t---atca-agt--ca-a-aa--g------a----a------------------------------a---ta-------ta---t
i Saiga_tatarica.SaiTat_scaffold_133311                  C 0 I 7
s Saimiri_boliviensis.NW_024100920.1                     119952706  4 - 121099817 ----------t-c---ac-------------------------------------------------------------------------------
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       25048  1 +     46362 ----------T--------------------------------------------------------------------------------------
i Saimiri_cassiquiarensis.k141_2188234                   C 0 I 1
s Saimiri_macrodon.k141_716185                               25143  4 +     45824 ----------T-T---AC-------------------------------------------------------------------------------
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             41821  4 -     64574 ----------T-C---AC-------------------------------------------------------------------------------
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4895  4 -     23631 ----------T-C---AC-------------------------------------------------------------------------------
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 25039  4 -     61129 ----------T-C---AC-------------------------------------------------------------------------------
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5422371 23 -   5703754 ----------T-C---ATCA-ggt--ta-c-ag--g------a----g------------------------------t---ca-------gt---t
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          57612 23 -     80660 ----------T-C---ATCA-GGT--TA-C-AG--G------A----G------------------------------T---CA-------GT---T
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Semnopithecus_entellus.k141_1672505                         5478 23 -     12572 ----------t-c---atCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      32331 23 +     39453 ----------t-c---atCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           12835 23 +     27826 ----------t-c---atCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            12381 23 -     19483 ----------t-c---atCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      5677 23 -     12762 ----------t-c---atCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           5520 23 +     13763 ----------t-c---atCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     4502 14 -     30804 ----------T-C---GGCA-AG---TGTT-AG----------------------------------------------------------------
i Sigmodon_hispidus.SigHis_scaffold_42075                I 1 I 20
s Solenodon_paradoxus.SolPar_flattened_line_126               5192 25 +   1910179 ----------t-c---attg-tgt--tA-A-AA--G------A----A------------------------------A--TTA-------TA-C-T
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 13
s Spermophilus_dauricus.KZ294078.1                         1957420 10 -   3870691 ----------t-c---atca-aa--ct----------------------------------------------------------------------
i Spermophilus_dauricus.KZ294078.1                       I 1 I 24
s Spilogale_gracilis.SpiGra_flattened_line_13525             33350 23 +     97271 ----------t-c---atca-agt--ta-c-aa--g------a----a------------------------------a---ta-------aa---c
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 7
s Suricata_suricatta.SurSur_flattened_line_6629              21916 15 -    196729 ----------t-c---atcc-agt--ca-c-aa--g-------------------------------------------------------------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 12
s Sus_scrofa.CM000828.4                                    6815017 23 +  69701581 ----------t-c---acca-agt--ta-a-aa--a------a----a------------------------------a---ta-------aa---t
i Sus_scrofa.CM000828.4                                  C 0 I 7
s Tadarida_brasiliensis.TadBra_scaffold_25820                14620 23 +     41958 ----------c-c---atca-agt--ta-t-aa--g------a----a------------------------------a---ca-------aa---t
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 136
s Tapirus_indicus.TapInd_scaffold_9301                      122277 23 -    156842 ----------t-c---atca-agt--ta-c-aa--g------a----a------------------------------a---ta-------ag---t
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 I 7
s Tapirus_terrestris.TapTer_scaffold_755                    390758 23 +    539355 ----------t-c---atca-agt--ta-c-aa--g------a----a------------------------------a---ta-------ag---t
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 7
s Tarsius_lariang.k141_2201908                               29376 15 +     70052 ----------T-C---ATCA-GGT--TA-T-AA--G-------------------------------------------------------------
i Tarsius_lariang.k141_2201908                           C 0 I 11
s Tarsius_wallacei.k141_254427                                4172 30 -     16117 ----------T-C---ATCA-GGT--TA-T-AA--G------A----A------------------------------A---TAAATGAATAT---T
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186433990 23 + 186847797 ----------T-A---TTCA-GCT--TA-C-AA--G------T----A------------------------------T---ca-------gt---t
i Theropithecus_gelada.CM009954.1                        I 1 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              108094 27 +    114563 ----------C-C---ATCA-AG-CA-A-T-AA--A------GAATAA------------------------------A---TA-------GG---A
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 3 I 7
s Trachypithecus_auratus.k141_722599                         16417 23 -     20410 ----------t-c---atCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      5537 23 -     12674 ----------t-c---atCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       16525 23 +     19930 ----------t-c---atCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      12925 23 -     19997 ----------t-c---atCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            53068 23 -     60166 ----------t-c---atCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        20531 23 -     27529 ----------t-c---atCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                       2159 23 +      9229 ----------t-c---atCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          14058 23 -     21137 ----------t-c---atCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                    2163 23 +      9131 ----------t-c---atCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                         2122 23 -      3730 ----------t-c---atCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        30391 23 +     32220 ----------t-c---atCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5944489 23 +   6242583 ----------t-c---atCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       13746 23 +     20839 ----------t-c---atCA-GCT--TA-C-AA--G------T----A------------------------------T---CA-------GT---T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    3944 23 +     27266 ----------t-t---atca-agt--ta-a-aa--g------a----a------------------------------a---ta-------aa---t
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 I 5
s Tupaia_chinensis.KB320699.1                              2166512 23 +   4065304 ----------t-c---atca-att--ta-t-aa--g------a----a------------------------------a---ta-------ag---t
i Tupaia_chinensis.KB320699.1                            C 0 I 141
s Tupaia_tana.TupTan_flattened_line_394                       2881 23 +     70247 ----------t-c---atCA-ATG--TA-T-AA--G------A----A------------------------------G---TA-------AG---G
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 137
s Tursiops_truncatus.MRVK01000835.1                       15741652 23 +  33153633 ----------t-t---atca-agt--ta-a-aa--g------a----a------------------------------a---ta-------aa---t
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 7
s Uropsilus_gracilis.UroGra_scaffold_12083                   57750 19 -     77625 ----------t-c---atcg-ggt--ta-a-aa--g------a----a------------------------------a---t--------------
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 I 11
s Ursus_maritimus.KK499267.1                               4853009 23 -   5085361 ----------t-c---atca-agt--ta-t-aa--g------a----a------------------------------a---ta-------aa---t
i Ursus_maritimus.KK499267.1                             C 0 I 7
s Vulpes_lagopus.VulLag_flattened_line_30954                 14512 23 -     43706 ----------t-c---atca-agt--ta-t-aa--g------a----a------------------------------a---ta-------aa---t
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 I 7
s Xerus_inauris.XerIna_scaffold_2302                          4462 23 +    224448 ----------t-c---atca-ag-t-tg-t-aa--g------a----a------------------------------a---ta-------aa---t
i Xerus_inauris.XerIna_scaffold_2302                     I 1 I 13
s Zapus_hudsonius.ZapHud_scaffold_11398                      17761 23 +     63895 ----------t-c---acca-ag---tgtt-ca--g------a----a------------------------------c---ta-------aa---g
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 1 I 11
s Ziphius_cavirostris.ZipCav_flattened_line_1424488            285 23 -       542 ----------t-t---atca-agt--ta-a-aa--g------a----a------------------------------a---ta-------aa---t
i Ziphius_cavirostris.ZipCav_flattened_line_1424488      C 0 I 7
e Cheracebus_torquatus.k141_1170026                          64344 81 +     76511 I
e Cheracebus_regulus.k141_471822                            159875 81 -    216457 I
e Cheracebus_lugens.k141_1393925                              2308 81 +     17877 I
e Cheracebus_lucifer.k141_49986                               2432 81 -     17098 I
e Echinops_telfairi.JH980293.1                            48781896  0 + 111700974 C
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1494  0 +      4343 C
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vicugna_pacos.KN270157.1                                 5374276 47 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294973  0 +  10818551 C
e Tonatia_saurophila.TonSau_scaffold_294                     83346 714 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_85600                    5751  1 +     18632 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Sorex_araneus.JH798187.1                                13653314 9235 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    156307 109 -    313613 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15806  0 -     22811 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                       107181400  0 - 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12287  0 -     18566 C
e Ondatra_zibethicus.OndZib_scaffold_7387                      632 3336 +    140218 I
e Octodon_degus.JH651603.1                                  750513 17 +  11899542 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                18000 920 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24609  0 -    145209 C
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184766 1004 -  29670104 I
e Manis_pentadactyla.KN006162.1                              54034 31 -    317179 I
e Manis_javanica.JSZB01003497.1                              21892 31 +    737560 I
e Loxodonta_africana.GL010049.1                            4219685  0 -  43346337 C
e Lepus_americanus.LepAme_scaffold_107385                     5119  0 +     14121 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3353  0 +      7595 C
e Heterocephalus_glaber.JH602082.1                        20664195 469 +  22651954 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Desmodus_rotundus.KZ672289.1                             8632254 708 +  20541912 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            70652  1 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    839213  0 +   1526836 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            7648  1 -      8501 I
e Carollia_perspicillata.CarPer_scaffold_92756                7250 707 -     11696 I
e Camelus_ferus.KB017975.1                                  405530 47 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2337232 47 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10004760 47 -  17673402 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6909 705 +     43469 I
e Anoura_caudifer.AnoCau_scaffold_1412                      187499 706 +    412891 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      11878 4 +     62944 cata
s Acinonyx_jubatus.LLWD01001279.1                           835306 1 -   1699592 --t-
i Acinonyx_jubatus.LLWD01001279.1                        I 12 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9513258 1 -  29979442 --t-
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 7 C 0
s Ailurus_fulgens.LNAC01001112.1                             82163 1 -    347723 --t-
i Ailurus_fulgens.LNAC01001112.1                         I 7 C 0
s Allenopithecus_nigroviridis.k141_3361533                   20139 4 -     52922 CATA
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_preussi.k141_1442296                         10556 2 -     18505 CA--
i Allochrocebus_preussi.k141_1442296                     C 0 I 8
s Allochrocebus_solatus.k141_166128                          11422 2 -     12518 CA--
i Allochrocebus_solatus.k141_166128                      C 0 I 16
s Alouatta_belzebul.k141_3560514                             11761 4 +     51355 CATA
i Alouatta_belzebul.k141_3560514                         C 0 I 4
s Alouatta_caraya.k141_1701091                                4872 4 -     36483 CATA
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              15324 4 +     28687 CATA
i Alouatta_discolor.k141_566626                          C 0 I 4
s Alouatta_juara.k141_1302312                                 3797 4 +     27940 catA
i Alouatta_juara.k141_1302312                            C 0 I 4
s Alouatta_macconnelli.k141_918386                            4885 4 -      9457 CATA
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             3843 4 +     30492 CATA
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              8064 4 +     47717 CATA
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              4565 4 +      5663 catA
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             19016 4 +     50774 catA
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          680975 1 -   2318259 --t-
i Ammotragus_lervia.NIVO01071767.1                       I 7 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303              2242 1 -     32520 --t-
i Antilocapra_americana.AntAmePen_scaffold_43303         I 7 C 0
s Aotus_azarae.k141_3104676                                  17557 3 -     33861 cat-
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            17555 3 -     34016 cat-
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299982 3 -   5030052 cat-
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             17591 3 -     34685 Cat-
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               30715 3 -     47192 CAT-
i Aotus_vociferans.k141_344750                           C 0 C 0
s Arctocebus_calabarensis.k141_1648548                         678 3 +      5281 TAT-
i Arctocebus_calabarensis.k141_1648548                   C 0 I 7
s Ateles_geoffroyi_b.tarseq_1536                             21212243 4 -  21539123 cata
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               47042 4 -     48001 cata
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 29843 4 -     30947 cata
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               11618 4 -     89868 cata
i Ateles_geoffroyi_a.k141_833924                           C 0 I 4
s Ateles_marginatus.k141_803263                              16000 4 -     40414 cata
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                23888 4 +     72325 cata
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15195315 1 +  23207421 --t-
i Balaenoptera_acutorostrata.KI537508.1                  I 7 C 0
s Balaenoptera_bonaerensis.DF707048.1                         5780 1 -     18090 --t-
i Balaenoptera_bonaerensis.DF707048.1                    I 7 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    32055 1 +     34529 --t-
i Beatragus_hunteri.BeaHun_scaffold_50177                I 7 C 0
s Bison_bison.KN261452.1                                    204690 1 -    288883 --t-
i Bison_bison.KN261452.1                                 I 7 C 0
s Bos_indicus.CM003047.1                                  20277927 1 +  48749331 --t-
i Bos_indicus.CM003047.1                                 I 7 C 0
s Bos_mutus.JH880303.1                                     1130481 1 -   1948126 --t-
i Bos_mutus.JH880303.1                                   I 7 C 0
s Bos_taurus.CM000203.6                                   18088565 1 +  45695690 --t-
i Bos_taurus.CM000203.6                                  I 7 C 0
s Bubalus_bubalis.KI419123.1                               2824515 1 +   4408762 --t-
i Bubalus_bubalis.KI419123.1                             I 7 C 0
s Cacajao_ayresi.k141_552049                                104877 4 -    122966 catg
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   64380 4 +     81800 catg
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  33562 4 -     95584 catg
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         57662 4 -    119600 catg
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_10318                               1319 3 +     27907 CAT-
i Callibella_humilis.k141_10318                          C 0 C 0
s Callimico_goeldii.k141_737284                                959 3 -     31217 CCT-
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                             1255 3 +      5377 CAT-
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23593116 3 - 189096842 CAT-
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1930 3 -     12329 CAT-
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s CanFam4.chr16                                           17802927 1 -  60362399 --t-
i CanFam4.chr16                                          I 7 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     3673 1 -     43241 --t-
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 7 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9038368 1 -   9314153 --t-
i Canis_lupus_dingo.QKWQ01000480.1                       I 7 C 0
s Canis_lupus_familiaris.chr16                            17962844 1 -  59632846 --t-
i Canis_lupus_familiaris.chr16                           I 7 C 0
s Canis_lupus_orion.HG994398.1                            18504141 1 +  63665305 --t-
i Canis_lupus_orion.HG994398.1                           I 7 C 0
s Capra_aegagrus.CM003241.1                               18835000 1 +  46296322 --t-
i Capra_aegagrus.CM003241.1                              I 7 C 0
s Capra_hircus.CM004588.1                                 18065801 1 -  44709034 --t-
i Capra_hircus.CM004588.1                                I 7 C 0
s Carlito_syrichta.NW_007259797.1                           158905 3 -    496798 cat-
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     97448 1 +    217609 --t-
i Catagonus_wagneri.CatWag_scaffold_2839                 I 16 C 0
s Cebuella_pygmaea.k141_793006                                 956 3 -     15088 CAT-
i Cebuella_pygmaea.k141_793006                           C 0 C 0
s Cebus_albifrons.Contig27                                25654436 1 +  26074798 C---
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                2374 3 +     28840 cac-
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 2103 3 +     14051 CAC-
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         8709 3 +     31688 cat-
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12234993 1 +  27778364 --t-
i Ceratotherium_simum.JH767749.1                         I 7 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           6016 1 -     25243 --t-
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      I 7 C 0
s Cercocebus_atys.KQ010504.1                               4481082 4 +   4669795 cata
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        5583 4 +     17872 CATA
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           6171 4 -     14043 CATA
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          14270 4 +     27781 CATA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        14435 4 -     20310 CATA
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          17408 4 +     29689 CATA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           12167 4 -     20078 CATA
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          20081 4 -     27936 CATA
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            8954 4 -     17152 CATA
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38828681 4 +  39242232 CATA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21228186 4 -  21565898 CATA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       45298 4 -     53127 CATA
i Cercopithecus_neglectus.k141_2526306                   C 0 I 2
s Cercopithecus_nictitans.k141_1119862                        5559 4 +     13442 CATA
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       20101 4 -     27947 CATA
i Cercopithecus_petaurista.k141_807961                   C 0 I 2
s Cercopithecus_pogonias.k141_2303387                         3129 4 +     10558 CATA
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          6132 4 +     14005 CATA
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chiropotes_albinasus.k141_2206961                           2738 4 -     15524 cata
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chiropotes_israelita.k141_747660                          102005 4 +    146308 catA
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          33812 4 -     50570 catA
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18434003 2 -  18827391 CA--
i Chlorocebus_aethiops.ctg25                             C 0 I 10
s Chlorocebus_pygerythrus.k141_1025673                       20500 2 -     50209 CA--
i Chlorocebus_pygerythrus.k141_1025673                   C 0 I 8
s Chlorocebus_sabaeus.CM001947.1                         135427506 2 + 135778131 ca--
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 8
s Colobus_angolensis.KN981557.1                            1916041 4 +   2368649 cata
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199954282 4 + 200372422 CATA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              42591 4 +     84244 CATA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17552955 1 -  53390261 --t-
i Condylura_cristata.JH655891.1                          I 11 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           4167 1 +     23735 --t-
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      I 11 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               7003 1 -     19598 --C-
i Crocidura_indochinensis.CroInd_scaffold_37019          I 12 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             31858 1 -     87169 --t-
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 12 C 0
s Delphinapterus_leucas.KZ290073.1                        16815190 1 +  35494412 --t-
i Delphinapterus_leucas.KZ290073.1                       I 7 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  676835 1 +   1390856 --t-
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 7 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    9595 1 +    198055 --t-
i Diceros_bicornis.DicBicMic_scaffold_5955               I 7 C 0
s Eidolon_helvum.KE797349.1                                   1081 1 -     31197 --t-
i Eidolon_helvum.KE797349.1                              I 11 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       315457 1 +    607251 --t-
i Elaphurus_davidianus.JRFZ01104969.1                    I 7 C 0
s Enhydra_lutris.KZ291758.1                               16339376 1 -  41312741 --t-
i Enhydra_lutris.KZ291758.1                              I 10 C 0
s Eptesicus_fuscus.JH977646.1                              2151464 1 -  14770903 --T-
i Eptesicus_fuscus.JH977646.1                            I 362 C 0
s Equus_asinus.JREZ01000139.1                              1287129 1 +   4378816 --t-
i Equus_asinus.JREZ01000139.1                            I 7 C 0
s Equus_caballus.CM000403.2                               18534937 1 -  39960074 --t-
i Equus_caballus.CM000403.2                              I 7 C 0
s Equus_przewalskii.KK951119.1                               36966 1 +    498745 --t-
i Equus_przewalskii.KK951119.1                           I 7 C 0
s Erythrocebus_patas.Contig38                             21210675 2 -  21539334 CA--
i Erythrocebus_patas.Contig38                            C 0 I 8
s Eschrichtius_robustus.EscRob_flattened_line_8968           14613 1 +    133382 --t-
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 7 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             28559 1 -     44125 --t-
i Eubalaena_japonica.EubJap_flattened_line_31514         I 7 C 0
s Felis_catus.CM001381.2                                  20240438 1 + 206538554 --t-
i Felis_catus.CM001381.2                                 I 12 C 0
s Felis_catus_fca126.CM031415.1                           20199309 1 + 205367284 --t-
i Felis_catus_fca126.CM031415.1                          I 12 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 12970 1 -     36744 --t-
i Felis_nigripes.FelNig_flattened_line_20823             I 12 C 0
s Galago_moholi.ctg2040                                     429878 3 -    453645 TAT-
i Galago_moholi.ctg2040                                  C 0 I 7
s Galago_senegalensis.k141_631886                             7572 3 +     11339 TAT-
i Galago_senegalensis.k141_631886                        C 0 I 7
s Galagoides_demidoff.k141_1711393                            4827 3 +     41679 AAT-
i Galagoides_demidoff.k141_1711393                       I 9 I 7
s Galeopterus_variegatus.GalVar_scaffold_108840               6185 3 -      9135 tat-
i Galeopterus_variegatus.GalVar_scaffold_108840          I 109 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     612699 1 -    660261 --t-
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 7 C 0
s Gorilla_beringei.k141_3596273                              21084 4 -     32273 cata
i Gorilla_beringei.k141_3596273                          I 336 I 4
s Gorilla_gorilla.LT578341.1                             186343214 4 + 186649187 cata
i Gorilla_gorilla.LT578341.1                             I 331 I 11
s Helogale_parvula.HelPar_flattened_line_2585               245669 1 +    327341 --t-
i Helogale_parvula.HelPar_flattened_line_2585            I 12 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 23294 1 +     36099 --t-
i Hemitragus_hylocrius.HemHyl_scaffold_45859             I 7 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               114035 1 +    128679 --t-
i Hippopotamus_amphibius.HipAmp_scaffold_9076            I 7 C 0
s Hipposideros_armiger.JXIK01000431.1                       113839 1 +   1711038 --c-
i Hipposideros_armiger.JXIK01000431.1                    I 13 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188               2405 1 +      9903 --c-
i Hipposideros_galeritus.HipGal_scaffold_101188          I 13 C 0
s Hoolock_leuconedys.ctg274                                    440354 4 +    630532 CATA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                2397 1 -     31341 --t-
i Inia_geoffrensis.IniGeo_flattened_line_34779           I 7 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                 2136 1 -     18011 --t-
i Kogia_breviceps.KogBre_flattened_line_81059            I 7 C 0
s Lagothrix_lagothricha.k141_1005387                         18059 4 -     38430 catg
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    20889 1 -     42476 --t-
i Lasiurus_borealis.LasBor_scaffold_32767                I 133 C 0
s Leontocebus_fuscicollis.k141_1820339                        9694 3 +     64341 CAT-
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           2036 3 -     35062 cat-
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        9723 3 +     35603 cat-
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    31339 3 +     38576 CAT-
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         28043 3 +     66356 CAT-
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3059313 1 +   3914936 --t-
i Leptonychotes_weddellii.KB714746.1                     I 7 C 0
s Lipotes_vexillifer.KE559953.1                             271668 1 -    662738 --t-
i Lipotes_vexillifer.KE559953.1                          I 7 C 0
s Lophocebus_aterrimus.ctg367                              1442631 4 +   1826925 CATA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_399337                            17879 3 -     33856 TAT-
i Loris_lydekkerianus.k141_399337                        C 0 I 7
s Loris_tardigradus.ctg83                                  1015590 3 +   6120653 TAT-
i Loris_tardigradus.ctg83                                C 0 I 7
s Lycaon_pictus.CM007581.1                                17959084 1 -  59628241 --t-
i Lycaon_pictus.CM007581.1                               I 7 C 0
s Macaca_arctoides.k141_2326796                              12442 4 +     40492 CATA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59681689 4 +  60120075 CATA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 18238 4 -     26193 CATA
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            86013 4 -    114318 CATA
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 11704 4 -     23192 CATA
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                21169 4 -     29190 CATA
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  29748 4 +     37952 CATA
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186844821 4 + 187317192 cata
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25463402 4 -  25927173 cata
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  85606 4 +     89720 CATA
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                12618 4 +     20474 CATA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  12392 4 -     14993 CATA
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  335255 4 -    668171 CATA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                10679 4 -     24072 CATA
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               31313 4 -     45290 CATA
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                  6118 1 +    270270 --t-
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 6 C 0
s Mandrillus_leucophaeus.scaffold280                      23942904 4 -  24302211 CATA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               357012 4 +    752769 CATA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        16691 1 -    207569 --t-
i Megaderma_lyra.MegLyr_scaffold_4542                    I 11 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             12958 1 +     13704 --t-
i Mellivora_capensis.MelCap_flattened_line_69365         I 7 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    6826 1 +     10310 --t-
i Mesoplodon_bidens.MesBid_scaffold_108144               I 7 C 0
s Mico_argentatus.k141_1024458                                 955 3 -     20047 CAT-
i Mico_argentatus.k141_1024458                           C 0 C 0
s Mico_humeralifer.k141_1346949                               1368 3 +      1399 CAT-
i Mico_humeralifer.k141_1346949                          C 0 C 0
s Mico_schneideri.k141_916733                                        955 3 +      5107 CAT-
i Mico_schneideri.k141_916733                                  C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1853990 1 +   8254450 --t-
i Miniopterus_natalensis.LDJU01000034.1                  I 130 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             37668 1 +     64694 --t-
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 130 C 0
s Miopithecus_ogouensis.k141_534055                          14584 4 -     28506 CATA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_55178          482 1 +     26817 --t-
i Mirounga_angustirostris.MirAng_flattened_line_55178    I 7 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    30574 1 -    437263 --t-
i Monodon_monoceros.MonMon_M_scaffold_103                I 7 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 144582 1 -    366855 --c-
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 11 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   4881 1 +     82753 --t-
i Moschus_moschiferus.MosMos_scaffold_13123              I 7 C 0
s Mungos_mungo.MunMun_flattened_line_40893                     676 1 +      5729 --t-
i Mungos_mungo.MunMun_flattened_line_40893               I 12 C 0
s Murina_feae.MurFea_scaffold_85699                          11247 1 +     14753 --t-
i Murina_feae.MurFea_scaffold_85699                      I 130 C 0
s Mustela_putorius.JH418006.1                               304456 1 -  14710649 --t-
i Mustela_putorius.JH418006.1                            I 7 C 0
s Myotis_brandtii.KE162005.1                                284732 1 -  10118263 --T-
i Myotis_brandtii.KE162005.1                             I 133 C 0
s Myotis_davidii.KB100139.1                                1592050 1 -   6019432 --T-
i Myotis_davidii.KB100139.1                              I 133 C 0
s Myotis_lucifugus.GL429869.1                              3908150 1 -   4330536 --t-
i Myotis_lucifugus.GL429869.1                            I 132 C 0
s Myotis_myotis.MyoMyo_scaffold_44643                         2702 1 +     25416 --t-
i Myotis_myotis.MyoMyo_scaffold_44643                    I 133 C 0
s Nasalis_larvatus.k141_413338                               20648 4 +     21681 CATA
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20310253 1 +  31847680 --t-
i Neomonachus_schauinslandi.NINY01007730.1               I 7 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5869539 1 +   7148211 --t-
i Neophocaena_asiaeorientalis.KZ687982.1                 I 7 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    760808 1 +    783361 --t-
i Noctilio_leporinus.NocLep_scaffold_251                 I 11 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9153001 1 -   9404916 --t-
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 7 C 0
s Nycticebus_bengalensis.LG01                            102596094 3 - 196305487 TAT-
i Nycticebus_bengalensis.LG01                            C 0 I 7
s Nycticebus_coucang.k141_1514628                             1561 3 -      5837 TAT-
i Nycticebus_coucang.k141_1514628                        C 0 I 7
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105772016 3 + 199412804 TAT-
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 7
s Odobenus_rosmarus.KB229312.1                              509078 1 -   2017862 --t-
i Odobenus_rosmarus.KB229312.1                           I 7 C 0
s Odocoileus_virginianus.KZ100018.1                         148257 1 +    630418 --t-
i Odocoileus_virginianus.KZ100018.1                      I 7 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          82645 1 -    150152 --t-
i Okapia_johnstoni.LVCL01S0005463.1                      I 7 C 0
s Orcinus_orca.KB316932.1                                  2785430 1 -  10937097 --t-
i Orcinus_orca.KB316932.1                                I 7 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       466426 1 -    559221 --t-
i Otocyon_megalotis.JAEUCK010005147.1                    I 7 C 0
s Otolemur_crassicaudatus.k141_222918                         7366 3 +      8798 TAT-
i Otolemur_crassicaudatus.k141_222918                    I 28 I 7
s Otolemur_garnettii.GL873799.1                             699605 3 -   1103335 TAT-
i Otolemur_garnettii.GL873799.1                          I 28 I 7
s Ovis_canadensis.OviCan_scaffold_2572                      179244 1 -    191736 --t-
i Ovis_canadensis.OviCan_scaffold_2572                   I 7 C 0
s Pan_paniscus.KQ411613.1                                    49210 4 +     80009 cata
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189148072 4 + 189151597 cata
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  154492 1 +    230217 --t-
i Panthera_onca.PanOnc_flattened_line_3271               I 12 C 0
s Panthera_pardus.KV860321.1                                267808 1 +  18783137 --t-
i Panthera_pardus.KV860321.1                             I 12 C 0
s Panthera_tigris.KE722367.1                               4724628 1 -   8748460 --t-
i Panthera_tigris.KE722367.1                             I 12 C 0
s Pantholops_hodgsonii.KE114653.1                          1269974 1 -   2937107 --t-
i Pantholops_hodgsonii.KE114653.1                        I 7 C 0
s Papio_anubis.CM001495.2                                183448824 4 + 183742232 CATC
i Papio_anubis.CM001495.2                                C 0 I 11
s Papio_cynocephalus.k141_4307930                            12351 4 +     20448 CATA
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20569162 4 +  20919399 CATA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                  11108 4 +     41871 CATA
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    14386 4 +     27711 CATA
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  5385 4 -     11374 CATA
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15889 1 -     78924 --t-
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 12 C 0
s Perodicticus_ibeanus.k141_1182643                            359 3 -      3244 TAT-
i Perodicticus_ibeanus.k141_1182643                      C 0 I 7
s Perodicticus_potto.k141_1186926                              737 3 +     10374 TAT-
i Perodicticus_potto.k141_1186926                        C 0 I 7
s Phocoena_phocoena.PhoPho_flattened_line_24159              12501 1 +     63832 --t-
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 7 C 0
s Piliocolobus_badius.k141_1142974                            3752 4 +     68526 CATA
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        43889 4 +     89929 CATA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            45305 4 +     51399 CATA
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14301541 4 -  14605196 cata
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             6026 1 +     22620 --t-
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        I 128 C 0
s Pithecia_albicans.k141_1476471                              7277 4 +     26961 cata
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          3404 4 +     23417 cgtA
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                7269 4 +     29694 cata
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          32295 4 +     52772 cata
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           7291 4 +     26198 catA
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3943821 4 +   4542175 CGTA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            7255 4 -     23490 catA
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610           2037 1 +      7680 --t-
i Platanista_gangetica.PlaMin_flattened_line_173610      I 7 C 0
s Plecturocebus_bernhardi.k141_2549090                       11521 4 -     39866 cata
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        20684 4 +     34906 cata
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       24946 4 +     87950 cata
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     25773 4 +     88961 cata
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         11443 4 +     39403 cata
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          25226 4 -     87928 cata
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         32188 4 +     60166 cata
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      32384 4 +     67232 cata
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          27857 4 +     90634 cata
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          25230 4 -     89403 cata
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189136678 4 + 189387572 cata
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9576288 4 +   9816681 CATA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               78829 4 -     81375 CATA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                             10665 4 +     19060 CATA
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Pteronotus_parnellii.KE909381.1                            18134 1 -     21811 --t-
i Pteronotus_parnellii.KE909381.1                        I 11 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_76658          1313 1 -      3818 --t-
i Pteronura_brasiliensis.PteBra_flattened_line_76658     I 7 C 0
s Pteropus_alecto.KB030862.1                              22987528 1 +  28871421 --t-
i Pteropus_alecto.KB030862.1                             I 11 C 0
s Pteropus_vampyrus.KN525825.1                             1371088 1 +   4952924 --t-
i Pteropus_vampyrus.KN525825.1                           I 11 C 0
s Puma_concolor.QAVW01001104.1                            20277698 1 -  38429054 --t-
i Puma_concolor.QAVW01001104.1                           I 12 C 0
s Pygathrix_cinerea.k141_1153803                             20642 4 -     91421 CACA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7614767 4 +   7812017 CACA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             20672 4 -     72585 CACA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                 10093 1 +     55207 --t-
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 7 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        370285 1 -   3329780 --c-
i Rhinolophus_sinicus.LVEH01000134.1                     I 11 C 0
s Rhinopithecus_bieti.k119_1041714                            1235 4 +      5697 CATA
i Rhinopithecus_bieti.k119_1041714                       C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91241708 4 - 195417433 cata
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7677357 4 +   7961872 CATA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_121563                 361 1 +      1157 --t-
i Rousettus_aegyptiacus.RouAeg_scaffold_121563           I 11 C 0
s Saguinus_bicolor.k141_8081                                  3003 3 +     42994 cat-
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                             1678 3 +      2253 Cat-
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               2127 3 -      8737 Cat-
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                              1759 3 +      2343 Cat-
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209476660 3 + 209938924 cat-
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                1086 3 -      7576 CAT-
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_133311                       2551 1 +      9503 --t-
i Saiga_tatarica.SaiTat_scaffold_133311                  I 7 C 0
s Sapajus_apella.ctg103                                    5422394 3 -   5703754 cac-
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          57635 3 -     80660 CAC-
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Semnopithecus_entellus.k141_1672505                         5501 4 -     12572 CATA
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      32354 4 +     39453 CATA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           12858 4 +     27826 CATA
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            12404 4 -     19483 CATA
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      5700 4 -     12762 CATA
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           5543 4 +     13763 CATA
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               5230 1 +   1910179 --T-
i Solenodon_paradoxus.SolPar_flattened_line_126          I 13 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             33380 1 +     97271 --t-
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 7 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              21943 1 -    196729 --t-
i Suricata_suricatta.SurSur_flattened_line_6629          I 12 C 0
s Sus_scrofa.CM000828.4                                    6815047 1 +  69701581 --t-
i Sus_scrofa.CM000828.4                                  I 7 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                14779 1 +     41958 --t-
i Tadarida_brasiliensis.TadBra_scaffold_25820            I 136 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      122307 1 -    156842 --t-
i Tapirus_indicus.TapInd_scaffold_9301                   I 7 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    390788 1 +    539355 --t-
i Tapirus_terrestris.TapTer_scaffold_755                 I 7 C 0
s Tarsius_lariang.k141_2201908                               29402 3 +     70052 CAT-
i Tarsius_lariang.k141_2201908                           I 11 C 0
s Tarsius_wallacei.k141_254427                                4202 3 -     16117 CAT-
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186434013 4 + 186847797 cata
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                         16440 4 -     20410 CATA
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      5560 4 -     12674 CATA
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       16548 4 +     19930 CATA
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      12948 4 -     19997 CATA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            53091 4 -     60166 CATA
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        20554 4 -     27529 CATA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                       2182 4 +      9229 CATA
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          14081 4 -     21137 CATA
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                    2186 4 +      9131 CATA
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                         2145 4 -      3730 CATA
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        30414 4 +     32220 CATA
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5944512 4 +   6242583 CATA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       13769 4 +     20839 CATA
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    3972 1 +     27266 --t-
i Tragulus_javanicus.TraJav_scaffold_40725               I 5 C 0
s Tupaia_chinensis.KB320699.1                              2166676 1 +   4065304 --t-
i Tupaia_chinensis.KB320699.1                            I 141 C 0
s Tupaia_tana.TupTan_flattened_line_394                       3041 1 +     70247 --T-
i Tupaia_tana.TupTan_flattened_line_394                  I 137 C 0
s Tursiops_truncatus.MRVK01000835.1                       15741682 1 +  33153633 --t-
i Tursiops_truncatus.MRVK01000835.1                      I 7 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   57780 1 -     77625 --t-
i Uropsilus_gracilis.UroGra_scaffold_12083               I 11 C 0
s Ursus_maritimus.KK499267.1                               4853039 1 -   5085361 --t-
i Ursus_maritimus.KK499267.1                             I 7 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 14542 1 -     43706 --t-
i Vulpes_lagopus.VulLag_flattened_line_30954             I 7 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_1424488            315 1 -       542 --t-
i Ziphius_cavirostris.ZipCav_flattened_line_1424488      I 7 C 0
e Cheracebus_torquatus.k141_1170026                          64344 81 +     76511 I
e Cheracebus_regulus.k141_471822                            159875 81 -    216457 I
e Cheracebus_lugens.k141_1393925                              2308 81 +     17877 I
e Cheracebus_lucifer.k141_49986                               2432 81 -     17098 I
e Echinops_telfairi.JH980293.1                            48781896 0 + 111700974 C
e Saimiri_ustus.k141_1484609                                 25043 0 -     61129 C
e Saimiri_sciureus.k141_2278166                               4899 0 -     23631 C
e Saimiri_oerstedii.k141_1487881                             41825 0 -     64574 C
e Saimiri_macrodon.k141_716185                               25147 0 +     45824 C
e Saimiri_cassiquiarensis.k141_2188234                       25049 1 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952710 0 - 121099817 C
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Mus_pahari.LT608297.1                                   31359383 11 -  89631738 I
e Mus_spretus.CM004101.1                                  90757467 11 - 130317789 I
e Mus_musculus.chr8                                       87654680 11 - 129401213 I
e Mus_caroli.LT608237.1                                   84365276 11 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1494 0 +      4343 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      17784 11 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Xerus_inauris.XerIna_scaffold_2302                          4485 13 +    224448 I
e Vicugna_pacos.KN270157.1                                 5374276 47 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294973 0 +  10818551 C
e Tonatia_saurophila.TonSau_scaffold_294                     83346 714 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_85600                    5751 1 +     18632 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              108121 7 +    114563 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Spermophilus_dauricus.KZ294078.1                         1957430 24 -   3870691 I
e Sorex_araneus.JH798187.1                                13653314 9235 -  18376816 I
e Sigmodon_hispidus.SigHis_scaffold_42075                     4516 20 -     30804 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    156307 109 -    313613 I
e Rattus_norvegicus.chr16                                 53574703 11 +  90668790 I
e Psammomys_obesus.NESX01036370.1                            15300 11 -     21651 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15806 0 -     22811 C
e Petromus_typicus.PetTyp_scaffold_221660                     1293 296 -      2102 I
e Peromyscus_maniculatus.KI615324.1                       18215268 11 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Ovis_aries.CM001607.2                                   17591086 7 +  44047080 I
e Oryctolagus_cuniculus.CM000791.1                       107181400 0 - 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12287 0 -     18566 C
e Onychomys_torridus.OnyTor_scaffold_2986                    84561 11 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_7387                      632 3336 +    140218 I
e Octodon_degus.JH651603.1                                  750513 17 +  11899542 I
e Ochotona_princeps.JH802162.1                             1368274 11 +   3988456 I
e Nannospalax_galili.KL204047.1                            2040230 7 -   3037898 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     73869 7 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              9258 14 +     14296 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                18000 920 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24609 0 -    145209 C
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184766 1004 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 37694 11 +    140813 I
e Marmota_marmota.CZRN01000018.1                          33106629 24 -  40650429 I
e Manis_pentadactyla.KN006162.1                              54034 31 -    317179 I
e Manis_javanica.JSZB01003497.1                              21892 31 +    737560 I
e Loxodonta_africana.GL010049.1                            4219685 0 -  43346337 C
e Lepus_americanus.LepAme_scaffold_107385                     5119 0 +     14121 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Jaculus_jaculus.JH725527.1                               8279032 12 -   9596543 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7525557 13 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      85523 7 +    135385 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            27359 7 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  48617 8 +     55795 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3353 0 +      7595 C
e Heterocephalus_glaber.JH602082.1                        20664195 469 +  22651954 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Graphiurus_murinus.GraMur_scaffold_10447                   37413 14 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            35790 14 +     49224 I
e Fukomys_damarensis.KN121974.1                             853051 7 +   3816255 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Ellobius_talpinus.LOJH01081419.1                            5041 11 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          25111 11 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 35946 23 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    43755 17 +     67921 I
e Desmodus_rotundus.KZ672289.1                             8632254 708 +  20541912 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            70652 1 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_15900             3241 7 -     75252 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  38612 7 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    839213 0 +   1526836 C
e Cricetulus_griseus.LT883664.1                           11669751 11 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 54228 11 +     63868 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1260426 17 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            7648 1 -      8501 I
e Cavia_tschudii.CavTsc_scaffold_8919                       103394 23 +    143979 I
e Cavia_porcellus.DS562891.1                              18364512 23 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18352252 23 -  23392119 I
e Castor_canadensis.CasCan_scaffold_2074                    140386 13 +    179628 I
e Carollia_perspicillata.CarPer_scaffold_92756                7250 707 -     11696 I
e Capromys_pilorides.CapPil_scaffold_65020                    3692 7 -     12242 I
e Camelus_ferus.KB017975.1                                  405530 47 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2337232 47 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10004760 47 -  17673402 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6909 705 +     43469 I
e Aplodontia_rufa.AprRuf_scaffold_68852                      15968 13 +     20879 I
e Anoura_caudifer.AnoCau_scaffold_1412                      187499 706 +    412891 I
e Allochrocebus_lhoesti.k141_4309873                         20069 6 -     28001 I
e Allactaga_bullata.AllBul_scaffold_9566                     76281 30 -     89534 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     74750 11 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      11882  9 +     62944 caca------ca--------c------------a----c
s Allenopithecus_nigroviridis.k141_3361533                   20143 15 -     52922 CACACACACACA--------C------------A----C
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         20075  5 -     28001 ----------CA--------C------------A----C
i Allochrocebus_lhoesti.k141_4309873                     I 6 C 0
s Allochrocebus_preussi.k141_1442296                         10566  7 -     18505 ----------CA--------CAC----------A----C
i Allochrocebus_preussi.k141_1442296                     I 8 C 0
s Allochrocebus_solatus.k141_166128                          11440  5 -     12518 ----------CA--------C------------A----C
i Allochrocebus_solatus.k141_166128                      I 16 C 0
s Alouatta_belzebul.k141_3560514                             11769  5 +     51355 ----------CA--------C------------A----C
i Alouatta_belzebul.k141_3560514                         I 4 C 0
s Alouatta_discolor.k141_566626                              15332  5 +     28687 ----------CA--------C------------A----C
i Alouatta_discolor.k141_566626                          I 4 C 0
s Alouatta_juara.k141_1302312                                 3805  5 +     27940 ----------CA--------C------------A----C
i Alouatta_juara.k141_1302312                            I 4 C 0
s Alouatta_caraya.k141_1701091                                4876  4 -     36483 CACA-----------------------------------
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_macconnelli.k141_918386                            4889  2 -      9457 CA-------------------------------------
i Alouatta_macconnelli.k141_918386                       C 0 I 3
s Alouatta_nigerrima.k141_1929159                             3847  2 +     30492 CA-------------------------------------
i Alouatta_nigerrima.k141_1929159                        C 0 I 3
s Alouatta_palliata.k141_2135620                              8068  4 +     47717 TACA-----------------------------------
i Alouatta_palliata.k141_2135620                         C 0 I 1
s Alouatta_puruensis.k141_362188                              4569  9 +      5663 CACA------CA--------C------------A----C
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             19020  9 +     50774 CACA------CA--------C------------A----C
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  17560  2 -     33861 ---------------------------------a----c
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            17558  2 -     34016 ---------------------------------a----c
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299985  2 -   5030052 ---------------------------------a----t
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             17594  2 -     34685 ---------------------------------a----t
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               30718  2 -     47192 ---------------------------------A----T
i Aotus_vociferans.k141_344750                           C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21212247  9 -  21539123 caaA------CA--------C------------A----C
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               47046  8 -     48001 caaA------CA--------C------------A-----
i Ateles_belzebuth.k141_445860                           C 0 I 7
s Ateles_chamek.k141_1806455                                 29847  8 -     30947 caaA------CA--------C------------A-----
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               11626  3 -     89868 --------------------C------------A----C
i Ateles_geoffroyi_a.k141_833924                           I 4 C 0
s Ateles_marginatus.k141_803263                              16004  9 -     40414 caaA------CA--------C------------A----C
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                23892  8 +     72325 caaA------CA--------C------------A-----
i Ateles_paniscus.k141_457735                            C 0 C 0
s Cacajao_ayresi.k141_552049                                104881  9 -    122966 caca------ca--------g------------a----c
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   64384  9 +     81800 caca------ca--------c------------a----c
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  33566  9 -     95584 caca------ca--------g------------a----c
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         57666  9 -    119600 CACA------CA--------C------------A----C
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_10318                               1322  2 +     27907 ---------------------------------A----C
i Callibella_humilis.k141_10318                          C 0 C 0
s Callimico_goeldii.k141_737284                                962  2 -     31217 ---------------------------------A----C
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                             1258  2 +      5377 ---------------------------------A----C
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23593119  2 - 189096842 ---------------------------------A----C
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1933  2 -     12329 ---------------------------------A----C
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Cebuella_pygmaea.k141_793006                                 959  2 -     15088 ---------------------------------A----C
i Cebuella_pygmaea.k141_793006                           C 0 C 0
s Cebus_olivaceus.k141_1764483                                2377  2 +     28840 ---------------------------------a----c
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 2106  2 +     14051 ---------------------------------A----C
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Cercocebus_atys.KQ010504.1                               4481086  9 +   4669795 caca------ca--------c------------a----c
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        5587  9 +     17872 CACA------CA--------C------------A----C
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           6175  9 -     14043 CACA------CA--------C------------A----C
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          14274  9 +     27781 CACA------CA--------C------------A----C
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        14439  6 -     20310 CACA------CA---------------------------
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          17412  9 +     29689 CACA------CA--------C------------A----C
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           12171  9 -     20078 CACA------CA--------C------------A----C
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          20085  4 -     27936 CACA-----------------------------------
i Cercopithecus_hamlyni.k141_187466                      C 0 I 3
s Cercopithecus_lowei.k141_1854285                            8958  9 -     17152 CACA------CA--------C------------A----C
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38828685 11 +  39242232 CACACA----CA--------C------------A----C
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21228190  9 -  21565898 CACA------CA--------C------------A----C
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       45304  9 -     53127 CACA------CA--------C------------A----C
i Cercopithecus_neglectus.k141_2526306                   I 2 C 0
s Cercopithecus_nictitans.k141_1119862                        5563  7 +     13442 CACACA----C----------------------------
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       20107  9 -     27947 CACA------CA--------C------------A----C
i Cercopithecus_petaurista.k141_807961                   I 2 C 0
s Cercopithecus_pogonias.k141_2303387                         3133  9 +     10558 CACA------CA--------C------------A----C
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          6136  9 +     14005 CACA------CA--------C------------A----C
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chiropotes_albinasus.k141_2206961                           2742  9 -     15524 cata------ca--------c------------a----c
i Chiropotes_albinasus.k141_2206961                      C 0 I 286
s Chiropotes_israelita.k141_747660                          102009  9 +    146308 CACA------CA--------C------------A----C
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          33816  9 -     50570 CACA------CA--------C------------A----C
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18434015  5 -  18827391 ----------CA--------C------------A----C
i Chlorocebus_aethiops.ctg25                             I 10 C 0
s Chlorocebus_pygerythrus.k141_1025673                       20510  5 -     50209 ----------CA--------C------------A----C
i Chlorocebus_pygerythrus.k141_1025673                   I 8 C 0
s Chlorocebus_sabaeus.CM001947.1                         135427516  5 + 135778131 ----------ca--------c------------a----c
i Chlorocebus_sabaeus.CM001947.1                         I 8 C 0
s Colobus_angolensis.KN981557.1                            1916045  9 +   2368649 caca------ca--------c------------a----t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199954286  9 + 200372422 CACA------CA--------C------------A----T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              42595  9 +     84244 CACA------CA--------C------------A----T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Erythrocebus_patas.Contig38                             21210685  5 -  21539334 ----------CA--------C------------A----C
i Erythrocebus_patas.Contig38                            I 8 C 0
s Gorilla_beringei.k141_3596273                              21092  5 -     32273 ----------ca--------c------------a----c
i Gorilla_beringei.k141_3596273                          I 4 C 0
s Gorilla_gorilla.LT578336.1                              33192692  9 -  33314783 caca------ca--------c------------a----c
i Gorilla_gorilla.LT578336.1                             I 762 C 0
s Hoolock_leuconedys.ctg274                                    440358  9 +    630532 CACA------CA--------C------------A----C
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         18063 13 -     38430 CACA------CA--------C------------ACACAC
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        9697  2 +     64341 ---------------------------------A----c
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           2039  2 -     35062 ---------------------------------a----c
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        9726  2 +     35603 ---------------------------------a----c
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    31342  2 +     38576 ---------------------------------G----C
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         28046  2 +     66356 ---------------------------------G----C
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lophocebus_aterrimus.ctg367                              1442635  4 +   1826925 CACA-----------------------------------
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                              12446  9 +     40492 CCCA------TA--------C------------A----C
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59681693  9 +  60120075 CACA------CA--------C------------A----C
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 18242  9 -     26193 CCCA------CA--------C------------A----C
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            86017 11 -    114318 CACACA----CA--------C------------A----C
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 11708  9 -     23192 CCCA------CA--------C------------A----C
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                21173  9 -     29190 CCCA------CA--------C------------A----C
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  29752 15 +     37952 CCCA------CA--------CACACAC------A----C
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186844825  9 + 187317192 ccca------ca--------c------------a----c
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25463406  9 -  25927173 ccca------ca--------c------------a----c
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  85610  9 +     89720 CCCA------CA--------C------------A----C
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                12622  9 +     20474 CCCA------CA--------C------------A----C
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  12396  9 -     14993 CCCA------CA--------C------------A----C
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  335259  9 -    668171 CCCA------CA--------C------------A----C
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                10683  9 -     24072 CCCA------TA--------C------------A----C
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               31317 21 -     45290 CCCA------CA--------CACACACACACACA----C
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23942908  9 -  24302211 CACA------CA--------C------------A----C
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               357016  9 +    752769 CACA------CA--------C------------A----C
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Mico_argentatus.k141_1024458                                 958  2 -     20047 ---------------------------------A----C
i Mico_argentatus.k141_1024458                           C 0 C 0
s Mico_humeralifer.k141_1346949                               1371  2 +      1399 ---------------------------------A----C
i Mico_humeralifer.k141_1346949                          C 0 C 0
s Mico_schneideri.k141_916733                                        958  2 +      5107 ---------------------------------A----C
i Mico_schneideri.k141_916733                                  C 0 C 0
s Miopithecus_ogouensis.k141_534055                          14588  9 -     28506 CACA------CA--------C------------A----C
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Nasalis_larvatus.k141_413338                               20652 11 +     21681 CACA------CA--------C------------ACA--T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Pan_paniscus.KQ411613.1                                    49214  2 +     80009 ca-------------------------------------
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189148076  9 + 189151597 caca------ca--------c------------a----c
i Pan_troglodytes.CM009242.2                             C 0 I 1
s Papio_anubis.CM001495.2                                183448839  9 + 183742232 caca------ca--------c------------c----c
i Papio_anubis.CM001495.2                                I 11 C 0
s Papio_cynocephalus.k141_4307930                            12355  9 +     20448 CACA------CA--------C------------A----C
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20569166  9 +  20919399 CACA------CA--------C------------A----C
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                  11112  9 +     41871 CACA------CA--------C------------A----C
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    14390  9 +     27711 CACA------CA--------C------------A----C
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  5389  9 -     11374 CACA------CA--------C------------A----C
i Papio_ursinus.k141_5274964                             C 0 C 0
s Piliocolobus_badius.k141_1142974                            3756  9 +     68526 CACA------CA--------C------------A----C
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        43893  9 +     89929 CACA------CA--------C------------A----T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            45309  9 +     51399 CACA------CA--------C------------A----T
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14301545  9 -  14605196 caca------ca--------c------------a----t
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1476471                              7281  9 +     26961 caca------ta--------c------------a----g
i Pithecia_albicans.k141_1476471                         C 0 I 8
s Pithecia_chrysocephala.k141_839575                          3408  9 +     23417 CACA------AA--------C------------A----C
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                7273  9 +     29694 caca------ta--------c------------a----g
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          32299 17 +     52772 caca------tacacacacac------------a----c
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           7295  9 +     26198 CACA------TA--------C------------A----G
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3943825  9 +   4542175 CACA------AA--------C------------A----C
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            7259  9 -     23490 CACA------TA--------C------------A----G
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       11525  6 -     39866 caca------ca---------------------------
i Plecturocebus_bernhardi.k141_2549090                   C 0 I 156
s Plecturocebus_brunneus.k141_1495506                        20688  6 +     34906 caca------ca---------------------------
i Plecturocebus_brunneus.k141_1495506                    C 0 I 156
s Plecturocebus_caligatus.k141_1382851                       24950  6 +     87950 caca------ca---------------------------
i Plecturocebus_caligatus.k141_1382851                   C 0 I 158
s Plecturocebus_cinerascens.k141_1164729                     25777  6 +     88961 caca------ca---------------------------
i Plecturocebus_cinerascens.k141_1164729                 C 0 I 136
s Plecturocebus_cupreus.k141_2351393                         11447  6 +     39403 caca------ca---------------------------
i Plecturocebus_cupreus.k141_2351393                     C 0 I 152
s Plecturocebus_dubius.k141_1058799                          25230  6 -     87928 caca------ca---------------------------
i Plecturocebus_dubius.k141_1058799                      C 0 I 146
s Plecturocebus_grovesi.k141_2013005                         32192  6 +     60166 caca------ca---------------------------
i Plecturocebus_grovesi.k141_2013005                     C 0 I 160
s Plecturocebus_hoffmannsi.k141_3303950                      32388  6 +     67232 caca------ca---------------------------
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 I 156
s Plecturocebus_miltoni.k141_349282                          27861  6 +     90634 caca------ca---------------------------
i Plecturocebus_miltoni.k141_349282                      C 0 I 148
s Plecturocebus_moloch.k141_1031110                          25234  6 -     89403 caca------ca---------------------------
i Plecturocebus_moloch.k141_1031110                      C 0 I 158
s Pongo_abelii.CM009266.2                                189136682  9 + 189387572 caca------ca--------c------------a----c
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9576292  9 +   9816681 CACA------CA--------C------------A----C
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               78833 11 -     81375 CACA------CA--------C------------ACA--T
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                             10669 11 +     19060 CACA------CA--------C------------ACA--T
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Pygathrix_cinerea.k141_1153803                             20646 11 -     91421 CACA------CA--------C------------CCA--T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7614771 11 +   7812017 CACA------CA--------C------------CCA--T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             20676 11 -     72585 CACA------CA--------C------------CCA--T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_1041714                            1239 11 +      5697 CACA------CA--------C------------ACA--T
i Rhinopithecus_bieti.k119_1041714                       C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91241712 11 - 195417433 caca------ca--------c------------a--cat
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7677361 11 +   7961872 CACA------CA--------C------------ACA--T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_8081                                  3006  2 +     42994 ---------------------------------a----c
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                             1681  2 +      2253 ---------------------------------a----c
i Saguinus_imperator.k141_1496743                        C 0 C 0
s Saguinus_inustus.k141_3945547                               2130  2 -      8737 ---------------------------------a----c
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                              1762  2 +      2343 ---------------------------------a----c
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209476663  2 + 209938924 ---------------------------------a----c
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                1089  2 -      7576 ---------------------------------a----c
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Sapajus_apella.ctg103                                    5422397  2 -   5703754 ---------------------------------a----c
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          57638  2 -     80660 ---------------------------------A----C
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Semnopithecus_entellus.k141_1672505                         5505 11 -     12572 CACA------CA--------C------------ACA--T
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      32358 11 +     39453 CACA------CA--------C------------ACA--T
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           12862 11 +     27826 CACA------CA--------C------------ACA--T
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            12408 11 -     19483 CACA------CA--------C------------ACA--T
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      5704 11 -     12762 CACA------CA--------C------------ACA--T
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           5547 11 +     13763 CACA------CA--------C------------ACA--T
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Theropithecus_gelada.CM009954.1                        186434017  9 + 186847797 caca------ca--------c------------a----c
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                         16444 11 -     20410 CACA------CA--------C------------ACA--T
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      5564 11 -     12674 CACA------CA--------C------------ACA--T
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       16552 11 +     19930 CACA------CA--------C------------ACA--T
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      12952 11 -     19997 CACA------CA--------C------------ACA--T
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            53095 11 -     60166 CACA------CA--------C------------ACA--T
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        20558 11 -     27529 CACA------CA--------C------------ACA--T
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                       2186 11 +      9229 CACA------CA--------C------------ACA--T
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          14085 11 -     21137 CACA------CA--------C------------ACA--T
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                    2190 11 +      9131 CACA------CA--------C------------ACA--T
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                         2149 11 -      3730 CACA------CA--------C------------ACA--T
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        30418 11 +     32220 CACA------CA--------C------------ACA--T
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5944516 11 +   6242583 CACA------CA--------C------------ACA--T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       13773 11 +     20839 CACA------CA--------C------------ACA--T
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
e Cheracebus_torquatus.k141_1170026                          64344 81 +     76511 I
e Cheracebus_regulus.k141_471822                            159875 81 -    216457 I
e Cheracebus_lugens.k141_1393925                              2308 81 +     17877 I
e Cheracebus_lucifer.k141_49986                               2432 81 -     17098 I
e Echinops_telfairi.JH980293.1                            48781896  0 + 111700974 C
e Otolemur_garnettii.GL873799.1                             699608  7 -   1103335 I
e Otolemur_crassicaudatus.k141_222918                         7369  7 +      8798 I
e Galago_senegalensis.k141_631886                             7575  7 +     11339 I
e Galago_moholi.ctg2040                                     429881  7 -    453645 I
e Saimiri_ustus.k141_1484609                                 25043  0 -     61129 C
e Saimiri_sciureus.k141_2278166                               4899  0 -     23631 C
e Saimiri_oerstedii.k141_1487881                             41825  0 -     64574 C
e Saimiri_macrodon.k141_716185                               25147  0 +     45824 C
e Saimiri_cassiquiarensis.k141_2188234                       25049  1 +     46362 I
e Saimiri_boliviensis.NW_024100920.1                     119952710  0 - 121099817 C
e Cebus_albifrons.Contig27                                25654437  0 +  26074798 C
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Mus_pahari.LT608297.1                                   31359383 11 -  89631738 I
e Mus_spretus.CM004101.1                                  90757467 11 - 130317789 I
e Mus_musculus.chr8                                       87654680 11 - 129401213 I
e Mus_caroli.LT608237.1                                   84365276 11 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1494  0 +      4343 C
e Loris_tardigradus.ctg83                                  1015593  7 +   6120653 I
e Loris_lydekkerianus.k141_399337                            17882  7 -     33856 I
e Perodicticus_potto.k141_1186926                              740  7 +     10374 I
e Perodicticus_ibeanus.k141_1182643                            362  7 -      3244 I
e Ziphius_cavirostris.ZipCav_flattened_line_1424488            316  0 -       542 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      17784 11 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Xerus_inauris.XerIna_scaffold_2302                          4485 13 +    224448 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 14543  0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5374276 47 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4853040  0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   57781  0 -     77625 C
e Tursiops_truncatus.MRVK01000835.1                       15741683  0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_394                       3042  0 +     70247 C
e Tupaia_chinensis.KB320699.1                              2166677  0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4294973  0 +  10818551 C
e Tragulus_javanicus.TraJav_scaffold_40725                    3973  0 +     27266 C
e Tonatia_saurophila.TonSau_scaffold_294                     83346 714 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_85600                    5751  1 +     18632 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              108121  7 +    114563 I
e Tarsius_wallacei.k141_254427                                4205  0 -     16117 C
e Tarsius_lariang.k141_2201908                               29405  0 +     70052 C
e Tapirus_terrestris.TapTer_scaffold_755                    390789  0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      122308  0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                14780  0 +     41958 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6815048  0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629              21944  0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             33381  0 +     97271 C
e Spermophilus_dauricus.KZ294078.1                         1957430 24 -   3870691 I
e Sorex_araneus.JH798187.1                                13653314 9235 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               5231  0 +   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_42075                     4516 20 -     30804 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    156307 109 -    313613 I
e Saiga_tatarica.SaiTat_scaffold_133311                       2552  0 +      9503 C
e Rousettus_aegyptiacus.RouAeg_scaffold_121563                 362  0 +      1157 C
e Rhinolophus_sinicus.LVEH01000134.1                        370286  0 -   3329780 C
e Rattus_norvegicus.chr16                                 53574703 11 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                 10094  0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20277699  0 -  38429054 C
e Pteropus_vampyrus.KN525825.1                             1371089  0 +   4952924 C
e Pteropus_alecto.KB030862.1                              22987529  0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_76658          1314  0 -      3818 C
e Pteronotus_parnellii.KE909381.1                            18135  0 -     21811 C
e Psammomys_obesus.NESX01036370.1                            15300 11 -     21651 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15806  0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_173610           2038  0 +      7680 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             6027  0 +     22620 C
e Phocoena_phocoena.PhoPho_flattened_line_24159              12502  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_221660                     1293 296 -      2102 I
e Peromyscus_maniculatus.KI615324.1                       18215268 11 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15890  0 -     78924 C
e Pantholops_hodgsonii.KE114653.1                          1269975  0 -   2937107 C
e Panthera_tigris.KE722367.1                               4724629  0 -   8748460 C
e Panthera_pardus.KV860321.1                                267809  0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  154493  0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      179245  0 -    191736 C
e Ovis_aries.CM001607.2                                   17591086  7 +  44047080 I
e Otocyon_megalotis.JAEUCK010005147.1                       466427  0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                       107181400  0 - 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12287  0 -     18566 C
e Orcinus_orca.KB316932.1                                  2785431  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    84561 11 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_7387                      632 3336 +    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          82646  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         148258  0 +    630418 C
e Odobenus_rosmarus.KB229312.1                              509079  0 -   2017862 C
e Octodon_degus.JH651603.1                                  750513 17 +  11899542 I
e Ochotona_princeps.JH802162.1                             1368274 11 +   3988456 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105772019  7 + 199412804 I
e Nycticebus_coucang.k141_1514628                             1564  7 -      5837 I
e Nycticebus_bengalensis.LG01                            102596097  7 - 196305487 I
e Nyctereutes_procyonoides.CAJHUB010000658.1               9153002  0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    760809  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5869540  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20310254  0 +  31847680 C
e Nannospalax_galili.KL204047.1                            2040230  7 -   3037898 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_44643                         2703  0 +     25416 C
e Myotis_lucifugus.GL429869.1                              3908151  0 -   4330536 C
e Myotis_davidii.KB100139.1                                1592051  0 -   6019432 C
e Myotis_brandtii.KE162005.1                                284733  0 -  10118263 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     73869  7 -     80779 I
e Mustela_putorius.JH418006.1                               304457  0 -  14710649 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              9258 14 +     14296 I
e Murina_feae.MurFea_scaffold_85699                          11248  0 +     14753 C
e Mungos_mungo.MunMun_flattened_line_40893                     677  0 +      5729 C
e Moschus_moschiferus.MosMos_scaffold_13123                   4882  0 +     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 144583  0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    30575  0 -    437263 C
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_55178          483  0 +     26817 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             37669  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1853991  0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                18000 920 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24609  0 -    145209 C
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    6827  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12184766 1004 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 37694 11 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365             12959  0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                        16692  0 -    207569 C
e Marmota_marmota.CZRN01000018.1                          33106629 24 -  40650429 I
e Manis_pentadactyla.KN006162.1                              54034 31 -    317179 I
e Manis_javanica.JSZB01003497.1                              21892 31 +    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                  6119  0 +    270270 C
e Lycaon_pictus.CM007581.1                                17959085  0 -  59628241 C
e Loxodonta_africana.GL010049.1                            4219685  0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             271669  0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     5119  0 +     14121 I
e Leptonychotes_weddellii.KB714746.1                       3059314  0 +   3914936 C
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Lasiurus_borealis.LasBor_scaffold_32767                    20890  0 -     42476 C
e Kogia_breviceps.KogBre_flattened_line_81059                 2137  0 -     18011 C
e Jaculus_jaculus.JH725527.1                               8279032 12 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_34779                2398  0 -     31341 C
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7525557 13 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      85523  7 +    135385 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            27359  7 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  48617  8 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_101188               2406  0 +      9903 C
e Hipposideros_armiger.JXIK01000431.1                       113840  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               114036  0 +    128679 C
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3353  0 +      7595 C
e Heterocephalus_glaber.JH602082.1                        20664195 469 +  22651954 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 23295  0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               245670  0 +    327341 C
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Graphiurus_murinus.GraMur_scaffold_10447                   37413 14 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            35790 14 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     612700  0 -    660261 C
e Galeopterus_variegatus.GalVar_scaffold_108840               6188  0 -      9135 C
e Galagoides_demidoff.k141_1711393                            4830  7 +     41679 I
e Fukomys_damarensis.KN121974.1                             853051  7 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                 12971  0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20199310  0 + 205367284 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Eubalaena_japonica.EubJap_flattened_line_31514             28560  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           14614  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               36967  0 +    498745 C
e Equus_caballus.CM000403.2                               18534938  0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1287130  0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2151465  0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16339377  0 -  41312741 C
e Ellobius_talpinus.LOJH01081419.1                            5041 11 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          25111 11 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       315458  0 +    607251 C
e Eidolon_helvum.KE797349.1                                   1082  0 -     31197 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 35946 23 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    43755 17 +     67921 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    9596  0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  676836  0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8632254 708 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16815191  0 +  35494412 C
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            70652  1 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_15900             3241  7 -     75252 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  38612  7 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    839213  0 +   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129             31859  0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_37019               7004  0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11669751 11 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 54228 11 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           4168  0 +     23735 C
e Condylura_cristata.JH655891.1                           17552956  0 -  53390261 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1260426 17 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            7648  1 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           6017  0 -     25243 C
e Cephalopachus_bancanus.k141_1423433                         8712  0 +     31688 C
e Cavia_tschudii.CavTsc_scaffold_8919                       103394 23 +    143979 I
e Cavia_porcellus.DS562891.1                              18364512 23 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18352252 23 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     97449  0 +    217609 C
e Castor_canadensis.CasCan_scaffold_2074                    140386 13 +    179628 I
e Carollia_perspicillata.CarPer_scaffold_92756                7250 707 -     11696 I
e Carlito_syrichta.NW_007259797.1                           158908  0 -    496798 C
e Capromys_pilorides.CapPil_scaffold_65020                    3692  7 -     12242 I
e Capra_hircus.CM004588.1                                 18065802  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18835001  0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18504142  0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17962845  0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9038369  0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     3674  0 -     43241 C
e CanFam4.chr16                                           17802928  0 -  60362399 C
e Camelus_ferus.KB017975.1                                  405530 47 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2337232 47 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10004760 47 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2824516  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18088566  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1130482  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20277928  0 +  48749331 C
e Bison_bison.KN261452.1                                    204691  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    32056  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         5781  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15195316  0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6909 705 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         681  7 +      5281 I
e Aplodontia_rufa.AprRuf_scaffold_68852                      15968 13 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_43303              2243  0 -     32520 C
e Anoura_caudifer.AnoCau_scaffold_1412                      187499 706 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          680976  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     76281 30 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             82164  0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9513259  0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     74750 11 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           835307  0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                      11891 2 +     62944 a------c
s Allenopithecus_nigroviridis.k141_3361533                   20158 2 -     52922 A------C
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         20080 2 -     28001 A------C
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                         10573 2 -     18505 A------C
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                          11445 2 -     12518 A------C
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             11774 2 +     51355 A------C
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_discolor.k141_566626                              15337 2 +     28687 A------C
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 3810 2 +     27940 A------C
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_puruensis.k141_362188                              4578 2 +      5663 A------C
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             19029 2 +     50774 A------C
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  17562 2 -     33861 a------c
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            17560 2 -     34016 a------c
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299987 2 -   5030052 a------c
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             17596 2 -     34685 a------c
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               30720 2 -     47192 A------C
i Aotus_vociferans.k141_344750                           C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21212256 2 -  21539123 A------C
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               11629 2 -     89868 A------C
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              16013 2 -     40414 A------C
i Ateles_marginatus.k141_803263                          C 0 C 0
s Cacajao_ayresi.k141_552049                                104890 2 -    122966 a------c
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   64393 2 +     81800 a------c
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  33575 2 -     95584 a------c
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         57675 2 -    119600 A------C
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_10318                               1324 2 +     27907 A------G
i Callibella_humilis.k141_10318                          C 0 C 0
s Callimico_goeldii.k141_737284                                964 2 -     31217 A------C
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                             1260 2 +      5377 A------C
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23593121 2 - 189096842 A------C
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1935 2 -     12329 A------C
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Cebuella_pygmaea.k141_793006                                 961 2 -     15088 A------C
i Cebuella_pygmaea.k141_793006                           C 0 C 0
s Cebus_olivaceus.k141_1764483                                2379 2 +     28840 a------c
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 2108 2 +     14051 A------C
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Cercocebus_atys.KQ010504.1                               4481095 2 +   4669795 a------c
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        5596 2 +     17872 A------C
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           6184 2 -     14043 A------C
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          14283 2 +     27781 A------C
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        14445 1 -     20310 -------C
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          17421 2 +     29689 A------C
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           12180 2 -     20078 A------C
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          20092 2 -     27936 A------C
i Cercopithecus_hamlyni.k141_187466                      I 3 C 0
s Cercopithecus_lowei.k141_1854285                            8967 2 -     17152 A------C
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38828696 2 +  39242232 A------C
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21228199 8 -  21565898 ACACACAC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       45313 2 -     53127 A------C
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        5570 2 +     13442 A------C
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       20116 2 -     27947 A------C
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         3142 2 +     10558 A------C
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          6145 2 +     14005 A------C
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chiropotes_albinasus.k141_2206961                           3037 2 -     15524 a------c
i Chiropotes_albinasus.k141_2206961                      I 286 C 0
s Chiropotes_israelita.k141_747660                          102018 2 +    146308 C------C
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          33825 2 -     50570 C------C
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18434020 2 -  18827391 A------C
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       20515 2 -     50209 A------C
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135427521 2 + 135778131 a------c
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1916054 2 +   2368649 a------c
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199954295 2 + 200372422 A------C
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              42604 2 +     84244 A------C
i Colobus_polykomos.k141_906115                          C 0 C 0
s Erythrocebus_patas.Contig38                             21210690 2 -  21539334 A------C
i Erythrocebus_patas.Contig38                            C 0 C 0
s Gorilla_beringei.k141_3596273                              21097 2 -     32273 a------c
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578336.1                              33192701 2 -  33314783 a------c
i Gorilla_gorilla.LT578336.1                             C 0 C 0
s Hoolock_leuconedys.ctg274                                    440367 2 +    630532 A------C
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         18076 2 -     38430 A------C
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        9699 2 +     64341 a------c
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           2041 2 -     35062 a------c
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        9728 2 +     35603 a------c
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    31344 2 +     38576 A------C
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         28048 2 +     66356 A------C
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lophocebus_aterrimus.ctg367                              1442639 1 +   1826925 -------C
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                              12455 2 +     40492 A------C
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59681702 2 +  60120075 A------C
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 18251 2 -     26193 A------C
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            86028 2 -    114318 A------C
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 11717 2 -     23192 A------C
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                21182 2 -     29190 A------C
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  29767 2 +     37952 A------C
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186844834 2 + 187317192 a------c
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25463415 2 -  25927173 a------c
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  85619 2 +     89720 A------C
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                12631 2 +     20474 A------C
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  12405 2 -     14993 A------C
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  335268 2 -    668171 A------C
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                10692 2 -     24072 A------C
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               31338 2 -     45290 A------C
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23942917 2 -  24302211 A------C
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               357025 2 +    752769 A------C
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Mico_argentatus.k141_1024458                                 960 2 -     20047 A------G
i Mico_argentatus.k141_1024458                           C 0 C 0
s Mico_humeralifer.k141_1346949                               1373 2 +      1399 A------G
i Mico_humeralifer.k141_1346949                          C 0 C 0
s Mico_schneideri.k141_916733                                        960 2 +      5107 A------G
i Mico_schneideri.k141_916733                                  C 0 C 0
s Miopithecus_ogouensis.k141_534055                          14597 2 -     28506 A------C
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Nasalis_larvatus.k141_413338                               20663 2 +     21681 A------C
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Pan_troglodytes.KZ622849.1                                 27425 2 +    110857 a------c
i Pan_troglodytes.KZ622849.1                             I 771 I 27
s Papio_anubis.CM001495.2                                183448848 2 + 183742232 a------c
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            12364 2 +     20448 A------C
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20569175 2 +  20919399 A------C
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                  11121 2 +     41871 A------C
i Papio_kindae.k141_1936966                              C 0 I 2
s Papio_papio.k141_802527                                    14399 2 +     27711 A------C
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  5398 2 -     11374 A------C
i Papio_ursinus.k141_5274964                             C 0 C 0
s Piliocolobus_badius.k141_1142974                            3765 2 +     68526 A------C
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        43902 2 +     89929 A------C
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            45318 2 +     51399 A------C
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14301554 2 -  14605196 a------c
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1476471                              7298 2 +     26961 a------c
i Pithecia_albicans.k141_1476471                         I 8 C 0
s Pithecia_chrysocephala.k141_839575                          3417 2 +     23417 A------C
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                7282 2 +     29694 a------c
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          32316 2 +     52772 a------c
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           7304 2 +     26198 A------C
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3943834 2 +   4542175 A------C
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            7268 8 -     23490 ACACACAC
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Pongo_abelii.CM009266.2                                189136691 2 + 189387572 a------c
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9576301 2 +   9816681 A------C
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               78844 2 -     81375 A------C
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                             10680 2 +     19060 A------C
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Pygathrix_cinerea.k141_1153803                             20657 2 -     91421 A------C
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7614782 2 +   7812017 A------C
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             20687 2 -     72585 A------C
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_1041714                            1250 2 +      5697 A------C
i Rhinopithecus_bieti.k119_1041714                       C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91241723 2 - 195417433 a------c
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7677372 2 +   7961872 A------C
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_8081                                  3008 2 +     42994 a------t
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                             1683 2 +      2253 a------c
i Saguinus_imperator.k141_1496743                        C 0 I 437
s Saguinus_inustus.k141_3945547                               2132 2 -      8737 a------c
i Saguinus_inustus.k141_3945547                          C 0 I 536
s Saguinus_labiatus.k141_4004060                              1764 2 +      2343 a------c
i Saguinus_labiatus.k141_4004060                         C 0 I 505
s Saguinus_midas.LG03                                    209476665 2 + 209938924 a------c
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                1091 2 -      7576 a------c
i Saguinus_mystax.k141_4699220                           C 0 I 389
s Saimiri_boliviensis.NW_024100920.1                     119952710 2 - 121099817 a------c
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       25050 2 +     46362 A------C
i Saimiri_cassiquiarensis.k141_2188234                   I 1 C 0
s Saimiri_macrodon.k141_716185                               25147 2 +     45824 A------C
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             41825 2 -     64574 A------C
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4899 2 -     23631 A------C
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 25043 2 -     61129 A------C
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5422399 2 -   5703754 a------c
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          57640 2 -     80660 A------C
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Semnopithecus_entellus.k141_1672505                         5516 2 -     12572 A------C
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      32369 2 +     39453 A------C
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           12873 2 +     27826 A------C
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            12419 2 -     19483 A------C
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      5715 2 -     12762 A------C
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           5558 2 +     13763 A------C
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Theropithecus_gelada.CM009954.1                        186434026 2 + 186847797 a------c
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                         16455 2 -     20410 A------C
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      5575 2 -     12674 A------C
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       16563 2 +     19930 A------C
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      12963 2 -     19997 A------C
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            53106 2 -     60166 A------C
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        20569 2 -     27529 A------C
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                       2197 2 +      9229 A------C
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          14096 2 -     21137 A------C
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                    2201 2 +      9131 A------C
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                         2160 2 -      3730 A------C
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        30429 2 +     32220 A------C
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5944527 2 +   6242583 A------C
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       13784 2 +     20839 A------C
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
e Cheracebus_torquatus.k141_1170026                          64344 81 +     76511 I
e Cheracebus_regulus.k141_471822                            159875 81 -    216457 I
e Cheracebus_lugens.k141_1393925                              2308 81 +     17877 I
e Cheracebus_lucifer.k141_49986                               2432 81 -     17098 I
e Plecturocebus_moloch.k141_1031110                          25240 158 -     89403 I
e Plecturocebus_miltoni.k141_349282                          27867 148 +     90634 I
e Plecturocebus_hoffmannsi.k141_3303950                      32394 156 +     67232 I
e Plecturocebus_grovesi.k141_2013005                         32198 160 +     60166 I
e Plecturocebus_dubius.k141_1058799                          25236 146 -     87928 I
e Plecturocebus_cupreus.k141_2351393                         11453 152 +     39403 I
e Plecturocebus_cinerascens.k141_1164729                     25783 136 +     88961 I
e Plecturocebus_caligatus.k141_1382851                       24956 158 +     87950 I
e Plecturocebus_brunneus.k141_1495506                        20694 156 +     34906 I
e Plecturocebus_bernhardi.k141_2549090                       11531 156 -     39866 I
e Ateles_paniscus.k141_457735                                23900 0 +     72325 C
e Ateles_chamek.k141_1806455                                 29855 0 -     30947 C
e Ateles_belzebuth.k141_445860                               47054 7 -     48001 I
e Echinops_telfairi.JH980293.1                            48781896 0 + 111700974 C
e Otolemur_garnettii.GL873799.1                             699608 7 -   1103335 I
e Otolemur_crassicaudatus.k141_222918                         7369 7 +      8798 I
e Galago_senegalensis.k141_631886                             7575 7 +     11339 I
e Galago_moholi.ctg2040                                     429881 7 -    453645 I
e Cebus_albifrons.Contig27                                25654437 0 +  26074798 C
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Alouatta_palliata.k141_2135620                              8072 1 +     47717 I
e Alouatta_nigerrima.k141_1929159                             3849 3 +     30492 I
e Alouatta_macconnelli.k141_918386                            4891 3 -      9457 I
e Alouatta_caraya.k141_1701091                                4880 0 -     36483 C
e Mus_pahari.LT608297.1                                   31359383 11 -  89631738 I
e Mus_spretus.CM004101.1                                  90757467 11 - 130317789 I
e Mus_musculus.chr8                                       87654680 11 - 129401213 I
e Mus_caroli.LT608237.1                                   84365276 11 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1494 0 +      4343 C
e Loris_tardigradus.ctg83                                  1015593 7 +   6120653 I
e Loris_lydekkerianus.k141_399337                            17882 7 -     33856 I
e Perodicticus_potto.k141_1186926                              740 7 +     10374 I
e Perodicticus_ibeanus.k141_1182643                            362 7 -      3244 I
e Ziphius_cavirostris.ZipCav_flattened_line_1424488            316 0 -       542 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      17784 11 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Xerus_inauris.XerIna_scaffold_2302                          4485 13 +    224448 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 14543 0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5374276 47 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4853040 0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   57781 0 -     77625 C
e Tursiops_truncatus.MRVK01000835.1                       15741683 0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_394                       3042 0 +     70247 C
e Tupaia_chinensis.KB320699.1                              2166677 0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4294973 0 +  10818551 C
e Tragulus_javanicus.TraJav_scaffold_40725                    3973 0 +     27266 C
e Tonatia_saurophila.TonSau_scaffold_294                     83346 714 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_85600                    5751 1 +     18632 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              108121 7 +    114563 I
e Tarsius_wallacei.k141_254427                                4205 0 -     16117 C
e Tarsius_lariang.k141_2201908                               29405 0 +     70052 C
e Tapirus_terrestris.TapTer_scaffold_755                    390789 0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      122308 0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                14780 0 +     41958 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6815048 0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629              21944 0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             33381 0 +     97271 C
e Spermophilus_dauricus.KZ294078.1                         1957430 24 -   3870691 I
e Sorex_araneus.JH798187.1                                13653314 9235 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               5231 0 +   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_42075                     4516 20 -     30804 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    156307 109 -    313613 I
e Saiga_tatarica.SaiTat_scaffold_133311                       2552 0 +      9503 C
e Rousettus_aegyptiacus.RouAeg_scaffold_121563                 362 0 +      1157 C
e Rhinolophus_sinicus.LVEH01000134.1                        370286 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53574703 11 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                 10094 0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20277699 0 -  38429054 C
e Pteropus_vampyrus.KN525825.1                             1371089 0 +   4952924 C
e Pteropus_alecto.KB030862.1                              22987529 0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_76658          1314 0 -      3818 C
e Pteronotus_parnellii.KE909381.1                            18135 0 -     21811 C
e Psammomys_obesus.NESX01036370.1                            15300 11 -     21651 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15806 0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_173610           2038 0 +      7680 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             6027 0 +     22620 C
e Phocoena_phocoena.PhoPho_flattened_line_24159              12502 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_221660                     1293 296 -      2102 I
e Peromyscus_maniculatus.KI615324.1                       18215268 11 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15890 0 -     78924 C
e Pantholops_hodgsonii.KE114653.1                          1269975 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4724629 0 -   8748460 C
e Panthera_pardus.KV860321.1                                267809 0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  154493 0 +    230217 C
e Pan_paniscus.KQ411613.1                                    49216 0 +     80009 C
e Ovis_canadensis.OviCan_scaffold_2572                      179245 0 -    191736 C
e Ovis_aries.CM001607.2                                   17591086 7 +  44047080 I
e Otocyon_megalotis.JAEUCK010005147.1                       466427 0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                       107181400 0 - 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12287 0 -     18566 C
e Orcinus_orca.KB316932.1                                  2785431 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    84561 11 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_7387                      632 3336 +    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          82646 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         148258 0 +    630418 C
e Odobenus_rosmarus.KB229312.1                              509079 0 -   2017862 C
e Octodon_degus.JH651603.1                                  750513 17 +  11899542 I
e Ochotona_princeps.JH802162.1                             1368274 11 +   3988456 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105772019 7 + 199412804 I
e Nycticebus_coucang.k141_1514628                             1564 7 -      5837 I
e Nycticebus_bengalensis.LG01                            102596097 7 - 196305487 I
e Nyctereutes_procyonoides.CAJHUB010000658.1               9153002 0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    760809 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5869540 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20310254 0 +  31847680 C
e Nannospalax_galili.KL204047.1                            2040230 7 -   3037898 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_44643                         2703 0 +     25416 C
e Myotis_lucifugus.GL429869.1                              3908151 0 -   4330536 C
e Myotis_davidii.KB100139.1                                1592051 0 -   6019432 C
e Myotis_brandtii.KE162005.1                                284733 0 -  10118263 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     73869 7 -     80779 I
e Mustela_putorius.JH418006.1                               304457 0 -  14710649 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              9258 14 +     14296 I
e Murina_feae.MurFea_scaffold_85699                          11248 0 +     14753 C
e Mungos_mungo.MunMun_flattened_line_40893                     677 0 +      5729 C
e Moschus_moschiferus.MosMos_scaffold_13123                   4882 0 +     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 144583 0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    30575 0 -    437263 C
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_55178          483 0 +     26817 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             37669 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1853991 0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                18000 920 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24609 0 -    145209 C
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    6827 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12184766 1004 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 37694 11 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365             12959 0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                        16692 0 -    207569 C
e Marmota_marmota.CZRN01000018.1                          33106629 24 -  40650429 I
e Manis_pentadactyla.KN006162.1                              54034 31 -    317179 I
e Manis_javanica.JSZB01003497.1                              21892 31 +    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                  6119 0 +    270270 C
e Lycaon_pictus.CM007581.1                                17959085 0 -  59628241 C
e Loxodonta_africana.GL010049.1                            4219685 0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             271669 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     5119 0 +     14121 I
e Leptonychotes_weddellii.KB714746.1                       3059314 0 +   3914936 C
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Lasiurus_borealis.LasBor_scaffold_32767                    20890 0 -     42476 C
e Kogia_breviceps.KogBre_flattened_line_81059                 2137 0 -     18011 C
e Jaculus_jaculus.JH725527.1                               8279032 12 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_34779                2398 0 -     31341 C
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7525557 13 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      85523 7 +    135385 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            27359 7 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  48617 8 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_101188               2406 0 +      9903 C
e Hipposideros_armiger.JXIK01000431.1                       113840 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               114036 0 +    128679 C
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3353 0 +      7595 C
e Heterocephalus_glaber.JH602082.1                        20664195 469 +  22651954 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 23295 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               245670 0 +    327341 C
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Graphiurus_murinus.GraMur_scaffold_10447                   37413 14 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            35790 14 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     612700 0 -    660261 C
e Galeopterus_variegatus.GalVar_scaffold_108840               6188 0 -      9135 C
e Galagoides_demidoff.k141_1711393                            4830 7 +     41679 I
e Fukomys_damarensis.KN121974.1                             853051 7 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                 12971 0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20199310 0 + 205367284 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Eubalaena_japonica.EubJap_flattened_line_31514             28560 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           14614 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               36967 0 +    498745 C
e Equus_caballus.CM000403.2                               18534938 0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1287130 0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2151465 0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16339377 0 -  41312741 C
e Ellobius_talpinus.LOJH01081419.1                            5041 11 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          25111 11 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       315458 0 +    607251 C
e Eidolon_helvum.KE797349.1                                   1082 0 -     31197 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 35946 23 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    43755 17 +     67921 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    9596 0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  676836 0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8632254 708 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16815191 0 +  35494412 C
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            70652 1 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_15900             3241 7 -     75252 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  38612 7 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    839213 0 +   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129             31859 0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_37019               7004 0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11669751 11 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 54228 11 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           4168 0 +     23735 C
e Condylura_cristata.JH655891.1                           17552956 0 -  53390261 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1260426 17 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            7648 1 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           6017 0 -     25243 C
e Cephalopachus_bancanus.k141_1423433                         8712 0 +     31688 C
e Cavia_tschudii.CavTsc_scaffold_8919                       103394 23 +    143979 I
e Cavia_porcellus.DS562891.1                              18364512 23 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18352252 23 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     97449 0 +    217609 C
e Castor_canadensis.CasCan_scaffold_2074                    140386 13 +    179628 I
e Carollia_perspicillata.CarPer_scaffold_92756                7250 707 -     11696 I
e Carlito_syrichta.NW_007259797.1                           158908 0 -    496798 C
e Capromys_pilorides.CapPil_scaffold_65020                    3692 7 -     12242 I
e Capra_hircus.CM004588.1                                 18065802 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18835001 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18504142 0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17962845 0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9038369 0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     3674 0 -     43241 C
e CanFam4.chr16                                           17802928 0 -  60362399 C
e Camelus_ferus.KB017975.1                                  405530 47 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2337232 47 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10004760 47 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2824516 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18088566 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1130482 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20277928 0 +  48749331 C
e Bison_bison.KN261452.1                                    204691 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    32056 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         5781 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15195316 0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6909 705 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         681 7 +      5281 I
e Aplodontia_rufa.AprRuf_scaffold_68852                      15968 13 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_43303              2243 0 -     32520 C
e Anoura_caudifer.AnoCau_scaffold_1412                      187499 706 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          680976 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     76281 30 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             82164 0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9513259 0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     74750 11 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           835307 0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                      11893 11 +     62944 a---------------cacacacaca
s Allenopithecus_nigroviridis.k141_3361533                   20160  3 -     52922 A---------------CA--------
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         20082  3 -     28001 A---------------CA--------
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                         10575  3 -     18505 A---------------CA--------
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                          11447  3 -     12518 A---------------CA--------
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             11776  4 +     51355 A---------------CAC-------
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_discolor.k141_566626                              15339  4 +     28687 A---------------CAC-------
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 3812  5 +     27940 A---------------CAC------A
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_puruensis.k141_362188                              4580  5 +      5663 A---------------CAC------A
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             19031  5 +     50774 A---------------CAC------A
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  17564  5 -     33861 a---------------cac------a
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            17562  5 -     34016 a---------------cac------a
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299989  5 -   5030052 a---------------cac------a
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             17598  5 -     34685 a---------------cac------a
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               30722  5 -     47192 A---------------CAC------A
i Aotus_vociferans.k141_344750                           C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21212258  5 -  21539123 A---------------CAC------A
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               11631  5 -     89868 A---------------CAC------A
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              16015  5 -     40414 A---------------CAC------A
i Ateles_marginatus.k141_803263                          C 0 I 4
s Cacajao_ayresi.k141_552049                                104892  5 -    122966 a---------------gac------a
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   64395  1 +     81800 -------------------------a
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  33577  5 -     95584 a---------------gac------a
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         57677  5 -    119600 A---------------GAC------A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_10318                               1326  1 +     27907 A-------------------------
i Callibella_humilis.k141_10318                          C 0 C 0
s Callimico_goeldii.k141_737284                                966  5 -     31217 A---------------AAC------A
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                             1262  5 +      5377 A---------------AAC------A
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23593123  1 - 189096842 A-------------------------
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1937  5 -     12329 A---------------AAC------A
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Cebuella_pygmaea.k141_793006                                 963  1 -     15088 A-------------------------
i Cebuella_pygmaea.k141_793006                           C 0 C 0
s Cebus_albifrons.Contig27                                25654437  5 +  26074798 A---------------CAC------A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                2381  5 +     28840 a---------------cac------a
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 2110  5 +     14051 A---------------CAC------A
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Cercocebus_atys.KQ010504.1                               4481097  3 +   4669795 a---------------ca--------
i Cercocebus_atys.KQ010504.1                             C 0 I 1
s Cercocebus_chrysogaster.k141_1540778                        5598  3 +     17872 A---------------CA--------
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           6186  3 -     14043 A---------------CA--------
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          14285  3 +     27781 A---------------CA--------
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        14446  3 -     20310 A---------------CA--------
i Cercopithecus_ascanius.k141_1024104                    C 0 I 1
s Cercopithecus_cephus.k141_1078548                          17423  3 +     29689 A---------------CA--------
i Cercopithecus_cephus.k141_1078548                      C 0 I 1
s Cercopithecus_diana.k141_1150327                           12182  3 -     20078 A---------------CA--------
i Cercopithecus_diana.k141_1150327                       C 0 I 7
s Cercopithecus_hamlyni.k141_187466                          20094  3 -     27936 A---------------CA--------
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            8969  3 -     17152 A---------------CA--------
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38828698  3 +  39242232 A---------------CA--------
i Cercopithecus_albogularis.ctg5                               C 0 I 1
s Cercopithecus_mona.ctg39                                21228207  3 -  21565898 A---------------CA--------
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       45315  3 -     53127 A---------------CA--------
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        5572  3 +     13442 A---------------CA--------
i Cercopithecus_nictitans.k141_1119862                   C 0 I 1
s Cercopithecus_petaurista.k141_807961                       20118  3 -     27947 A---------------CA--------
i Cercopithecus_petaurista.k141_807961                   C 0 I 1
s Cercopithecus_pogonias.k141_2303387                         3144  3 +     10558 A---------------CA--------
i Cercopithecus_pogonias.k141_2303387                    C 0 I 1
s Cercopithecus_roloway.k141_2581234                          6147  3 +     14005 A---------------CA--------
i Cercopithecus_roloway.k141_2581234                     C 0 I 10
s Chiropotes_albinasus.k141_2206961                           3039  5 -     15524 a---------------cac------a
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chiropotes_israelita.k141_747660                          102020  5 +    146308 A---------------CAC------A
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          33827  5 -     50570 A---------------CAC------A
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18434022  3 -  18827391 A---------------CA--------
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       20517  3 -     50209 A---------------CA--------
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135427523  3 + 135778131 a---------------ca--------
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1916056  4 +   2368649 a---------------cac-------
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199954297  4 + 200372422 A---------------CAC-------
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              42606  4 +     84244 A---------------CAC-------
i Colobus_polykomos.k141_906115                          C 0 C 0
s Erythrocebus_patas.Contig38                             21210692  3 -  21539334 A---------------CA--------
i Erythrocebus_patas.Contig38                            C 0 C 0
s Gorilla_beringei.k141_3596273                              21099 11 -     32273 a---------------cacacacaca
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578336.1                              33192703 11 -  33314783 a---------------cacacacaca
i Gorilla_gorilla.LT578336.1                             C 0 I 11
s Hoolock_leuconedys.ctg274                                    440369  5 +    630532 A---------------CAC------A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         18078  5 -     38430 A---------------CAC------A
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        9701  5 +     64341 a---------------cac------a
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           2043  5 -     35062 a---------------cac------a
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                        9730  5 +     35603 a---------------cac------a
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    31346  5 +     38576 A---------------AAC------A
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         28050  5 +     66356 A---------------AAC------A
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lophocebus_aterrimus.ctg367                              1442640  3 +   1826925 A---------------CA--------
i Lophocebus_aterrimus.ctg367                            C 0 I 10
s Macaca_arctoides.k141_2326796                              12457  3 +     40492 A---------------CA--------
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59681704  3 +  60120075 A---------------CA--------
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 18253  3 -     26193 A---------------CA--------
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            86030  3 -    114318 A---------------CA--------
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 11719  3 -     23192 A---------------CA--------
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                21184  3 -     29190 A---------------CA--------
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  29769  3 +     37952 A---------------CA--------
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186844836  3 + 187317192 a---------------ca--------
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25463417  3 -  25927173 a---------------ca--------
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  85621  3 +     89720 A---------------CA--------
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                12633  3 +     20474 A---------------CA--------
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  12407  3 -     14993 A---------------CA--------
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  335270  3 -    668171 A---------------CA--------
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                10694  3 -     24072 A---------------CA--------
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               31340  3 -     45290 A---------------CA--------
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23942919  3 -  24302211 A---------------CA--------
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               357027  3 +    752769 A---------------CA--------
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Mico_argentatus.k141_1024458                                 962  1 -     20047 A-------------------------
i Mico_argentatus.k141_1024458                           C 0 C 0
s Mico_humeralifer.k141_1346949                               1375  1 +      1399 A-------------------------
i Mico_humeralifer.k141_1346949                          C 0 C 0
s Mico_schneideri.k141_916733                                        962  1 +      5107 A-------------------------
i Mico_schneideri.k141_916733                                  C 0 C 0
s Miopithecus_ogouensis.k141_534055                          14599  2 -     28506 A---------------C---------
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Nasalis_larvatus.k141_413338                               20665  4 +     21681 A---------------CAC-------
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Pan_paniscus.KQ411613.1                                    49216  6 +     80009 --------------------cacaca
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189148086 11 + 189151597 a---------------cacacacaca
i Pan_troglodytes.CM009242.2                             I 1 C 0
s Papio_anubis.CM001495.2                                183448850  3 + 183742232 a---------------ca--------
i Papio_anubis.CM001495.2                                C 0 I 9
s Papio_cynocephalus.k141_4307930                            12366  3 +     20448 A---------------CA--------
i Papio_cynocephalus.k141_4307930                        C 0 I 6
s Papio_hamadryas.Contig39                                20569177  3 +  20919399 A---------------CA--------
i Papio_hamadryas.Contig39                               C 0 I 10
s Papio_kindae.k141_1936966                                  11125  3 +     41871 A---------------CA--------
i Papio_kindae.k141_1936966                              I 2 I 10
s Papio_papio.k141_802527                                    14401  3 +     27711 A---------------CA--------
i Papio_papio.k141_802527                                C 0 I 12
s Piliocolobus_badius.k141_1142974                            3767  4 +     68526 A---------------CAC-------
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        43904  4 +     89929 A---------------CAC-------
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            45320  4 +     51399 A---------------CAC-------
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14301556  4 -  14605196 a---------------cac-------
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1476471                              7300  5 +     26961 a---------------cac------a
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          3419  5 +     23417 A---------------CAC------A
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                7284  5 +     29694 a---------------cac------a
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          32318  5 +     52772 a---------------cac------a
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           7306  5 +     26198 A---------------CAC------A
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3943836  5 +   4542175 A---------------CAC------A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            7276  5 -     23490 A---------------CAC------A
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Pongo_abelii.CM009266.2                                189136693 11 + 189387572 a---------------cacacacaca
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9576303 11 +   9816681 A---------------CACACACACA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               78846  4 -     81375 A---------------CAC-------
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                             10682  4 +     19060 A---------------CAC-------
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Pygathrix_cinerea.k141_1153803                             20659  4 -     91421 A---------------CAC-------
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7614784  4 +   7812017 A---------------CAC-------
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             20689  4 -     72585 A---------------CAC-------
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_1041714                            1252  4 +      5697 A---------------CAC-------
i Rhinopithecus_bieti.k119_1041714                       C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91241725  4 - 195417433 a---------------cac-------
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7677374  4 +   7961872 A---------------CAC-------
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_8081                                  3010 20 +     42994 acacacataaacacacaac------a
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_1496743                             2122  5 +      2253 a---------------aac------a
i Saguinus_imperator.k141_1496743                        I 437 N 0
s Saguinus_inustus.k141_3945547                               2670  4 -      8737 a---------------aac-------
i Saguinus_inustus.k141_3945547                          I 536 C 0
s Saguinus_labiatus.k141_4004060                              2271  4 +      2343 a---------------aac-------
i Saguinus_labiatus.k141_4004060                         I 505 C 0
s Saguinus_midas.LG03                                    209476667 20 + 209938924 acacacataaacacacaac------a
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                1482  4 -      7576 a---------------aac-------
i Saguinus_mystax.k141_4699220                           I 389 C 0
s Saimiri_boliviensis.NW_024100920.1                     119952712  5 - 121099817 a---------------cac------a
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       25052  1 +     46362 -------------------------A
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               25149  1 +     45824 -------------------------A
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_sciureus.k141_2278166                               4901  5 -     23631 A---------------CAC------A
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Sapajus_apella.ctg103                                    5422401  5 -   5703754 a---------------cac------a
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          57642  5 -     80660 A---------------CAC------A
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Semnopithecus_entellus.k141_1672505                         5518  4 -     12572 A---------------CAC-------
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      32371  4 +     39453 A---------------CAC-------
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           12875  4 +     27826 A---------------CAC-------
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            12421  4 -     19483 A---------------CAC-------
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      5717  4 -     12762 A---------------CAC-------
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           5560  4 +     13763 A---------------CAC-------
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Theropithecus_gelada.CM009954.1                        186434028  3 + 186847797 a---------------ca--------
i Theropithecus_gelada.CM009954.1                        C 0 I 16
s Trachypithecus_auratus.k141_722599                         16457  4 -     20410 A---------------CAC-------
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      5577  4 -     12674 A---------------CAC-------
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       16565  4 +     19930 A---------------CAC-------
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      12965  4 -     19997 A---------------CAC-------
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            53108  4 -     60166 A---------------CAC-------
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        20571  4 -     27529 A---------------CAC-------
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                       2199  4 +      9229 A---------------CAC-------
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          14098  4 -     21137 G---------------CAC-------
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                    2203  4 +      9131 A---------------CAC-------
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                         2162  4 -      3730 A---------------CAC-------
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        30431  4 +     32220 A---------------CAC-------
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5944529  4 +   6242583 A---------------CAC-------
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       13786  4 +     20839 A---------------CAC-------
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
e Cheracebus_torquatus.k141_1170026                          64344 81 +     76511 I
e Cheracebus_regulus.k141_471822                            159875 81 -    216457 I
e Cheracebus_lugens.k141_1393925                              2308 81 +     17877 I
e Cheracebus_lucifer.k141_49986                               2432 81 -     17098 I
e Plecturocebus_moloch.k141_1031110                          25240 158 -     89403 I
e Plecturocebus_miltoni.k141_349282                          27867 148 +     90634 I
e Plecturocebus_hoffmannsi.k141_3303950                      32394 156 +     67232 I
e Plecturocebus_grovesi.k141_2013005                         32198 160 +     60166 I
e Plecturocebus_dubius.k141_1058799                          25236 146 -     87928 I
e Plecturocebus_cupreus.k141_2351393                         11453 152 +     39403 I
e Plecturocebus_cinerascens.k141_1164729                     25783 136 +     88961 I
e Plecturocebus_caligatus.k141_1382851                       24956 158 +     87950 I
e Plecturocebus_brunneus.k141_1495506                        20694 156 +     34906 I
e Plecturocebus_bernhardi.k141_2549090                       11531 156 -     39866 I
e Ateles_paniscus.k141_457735                                23900  0 +     72325 C
e Ateles_chamek.k141_1806455                                 29855  0 -     30947 C
e Ateles_belzebuth.k141_445860                               47054  7 -     48001 I
e Echinops_telfairi.JH980293.1                            48781896  0 + 111700974 C
e Otolemur_garnettii.GL873799.1                             699608  7 -   1103335 I
e Otolemur_crassicaudatus.k141_222918                         7369  7 +      8798 I
e Galago_senegalensis.k141_631886                             7575  7 +     11339 I
e Galago_moholi.ctg2040                                     429881  7 -    453645 I
e Saimiri_ustus.k141_1484609                                 25045  0 -     61129 C
e Saimiri_oerstedii.k141_1487881                             41827  0 -     64574 C
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Alouatta_palliata.k141_2135620                              8072  1 +     47717 I
e Alouatta_nigerrima.k141_1929159                             3849  3 +     30492 I
e Alouatta_macconnelli.k141_918386                            4891  3 -      9457 I
e Alouatta_caraya.k141_1701091                                4880  0 -     36483 C
e Mus_pahari.LT608297.1                                   31359383 11 -  89631738 I
e Mus_spretus.CM004101.1                                  90757467 11 - 130317789 I
e Mus_musculus.chr8                                       87654680 11 - 129401213 I
e Mus_caroli.LT608237.1                                   84365276 11 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1494  0 +      4343 C
e Loris_tardigradus.ctg83                                  1015593  7 +   6120653 I
e Loris_lydekkerianus.k141_399337                            17882  7 -     33856 I
e Perodicticus_potto.k141_1186926                              740  7 +     10374 I
e Perodicticus_ibeanus.k141_1182643                            362  7 -      3244 I
e Ziphius_cavirostris.ZipCav_flattened_line_1424488            316  0 -       542 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      17784 11 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Xerus_inauris.XerIna_scaffold_2302                          4485 13 +    224448 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 14543  0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5374276 47 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4853040  0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   57781  0 -     77625 C
e Tursiops_truncatus.MRVK01000835.1                       15741683  0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_394                       3042  0 +     70247 C
e Tupaia_chinensis.KB320699.1                              2166677  0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4294973  0 +  10818551 C
e Tragulus_javanicus.TraJav_scaffold_40725                    3973  0 +     27266 C
e Tonatia_saurophila.TonSau_scaffold_294                     83346 714 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_85600                    5751  1 +     18632 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              108121  7 +    114563 I
e Tarsius_wallacei.k141_254427                                4205  0 -     16117 C
e Tarsius_lariang.k141_2201908                               29405  0 +     70052 C
e Tapirus_terrestris.TapTer_scaffold_755                    390789  0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      122308  0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                14780  0 +     41958 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6815048  0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629              21944  0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             33381  0 +     97271 C
e Spermophilus_dauricus.KZ294078.1                         1957430 24 -   3870691 I
e Sorex_araneus.JH798187.1                                13653314 9235 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               5231  0 +   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_42075                     4516 20 -     30804 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    156307 109 -    313613 I
e Saiga_tatarica.SaiTat_scaffold_133311                       2552  0 +      9503 C
e Rousettus_aegyptiacus.RouAeg_scaffold_121563                 362  0 +      1157 C
e Rhinolophus_sinicus.LVEH01000134.1                        370286  0 -   3329780 C
e Rattus_norvegicus.chr16                                 53574703 11 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                 10094  0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20277699  0 -  38429054 C
e Pteropus_vampyrus.KN525825.1                             1371089  0 +   4952924 C
e Pteropus_alecto.KB030862.1                              22987529  0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_76658          1314  0 -      3818 C
e Pteronotus_parnellii.KE909381.1                            18135  0 -     21811 C
e Psammomys_obesus.NESX01036370.1                            15300 11 -     21651 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15806  0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_173610           2038  0 +      7680 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             6027  0 +     22620 C
e Phocoena_phocoena.PhoPho_flattened_line_24159              12502  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_221660                     1293 296 -      2102 I
e Peromyscus_maniculatus.KI615324.1                       18215268 11 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15890  0 -     78924 C
e Papio_ursinus.k141_5274964                                  5400  0 -     11374 C
e Pantholops_hodgsonii.KE114653.1                          1269975  0 -   2937107 C
e Panthera_tigris.KE722367.1                               4724629  0 -   8748460 C
e Panthera_pardus.KV860321.1                                267809  0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  154493  0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      179245  0 -    191736 C
e Ovis_aries.CM001607.2                                   17591086  7 +  44047080 I
e Otocyon_megalotis.JAEUCK010005147.1                       466427  0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                       107181400  0 - 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12287  0 -     18566 C
e Orcinus_orca.KB316932.1                                  2785431  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    84561 11 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_7387                      632 3336 +    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          82646  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         148258  0 +    630418 C
e Odobenus_rosmarus.KB229312.1                              509079  0 -   2017862 C
e Octodon_degus.JH651603.1                                  750513 17 +  11899542 I
e Ochotona_princeps.JH802162.1                             1368274 11 +   3988456 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105772019  7 + 199412804 I
e Nycticebus_coucang.k141_1514628                             1564  7 -      5837 I
e Nycticebus_bengalensis.LG01                            102596097  7 - 196305487 I
e Nyctereutes_procyonoides.CAJHUB010000658.1               9153002  0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    760809  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5869540  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20310254  0 +  31847680 C
e Nannospalax_galili.KL204047.1                            2040230  7 -   3037898 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_44643                         2703  0 +     25416 C
e Myotis_lucifugus.GL429869.1                              3908151  0 -   4330536 C
e Myotis_davidii.KB100139.1                                1592051  0 -   6019432 C
e Myotis_brandtii.KE162005.1                                284733  0 -  10118263 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     73869  7 -     80779 I
e Mustela_putorius.JH418006.1                               304457  0 -  14710649 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              9258 14 +     14296 I
e Murina_feae.MurFea_scaffold_85699                          11248  0 +     14753 C
e Mungos_mungo.MunMun_flattened_line_40893                     677  0 +      5729 C
e Moschus_moschiferus.MosMos_scaffold_13123                   4882  0 +     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 144583  0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    30575  0 -    437263 C
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_55178          483  0 +     26817 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             37669  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1853991  0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                18000 920 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24609  0 -    145209 C
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    6827  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12184766 1004 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 37694 11 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365             12959  0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                        16692  0 -    207569 C
e Marmota_marmota.CZRN01000018.1                          33106629 24 -  40650429 I
e Manis_pentadactyla.KN006162.1                              54034 31 -    317179 I
e Manis_javanica.JSZB01003497.1                              21892 31 +    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                  6119  0 +    270270 C
e Lycaon_pictus.CM007581.1                                17959085  0 -  59628241 C
e Loxodonta_africana.GL010049.1                            4219685  0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             271669  0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     5119  0 +     14121 I
e Leptonychotes_weddellii.KB714746.1                       3059314  0 +   3914936 C
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Lasiurus_borealis.LasBor_scaffold_32767                    20890  0 -     42476 C
e Kogia_breviceps.KogBre_flattened_line_81059                 2137  0 -     18011 C
e Jaculus_jaculus.JH725527.1                               8279032 12 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_34779                2398  0 -     31341 C
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7525557 13 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      85523  7 +    135385 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            27359  7 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  48617  8 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_101188               2406  0 +      9903 C
e Hipposideros_armiger.JXIK01000431.1                       113840  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               114036  0 +    128679 C
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3353  0 +      7595 C
e Heterocephalus_glaber.JH602082.1                        20664195 469 +  22651954 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 23295  0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               245670  0 +    327341 C
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Graphiurus_murinus.GraMur_scaffold_10447                   37413 14 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            35790 14 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     612700  0 -    660261 C
e Galeopterus_variegatus.GalVar_scaffold_108840               6188  0 -      9135 C
e Galagoides_demidoff.k141_1711393                            4830  7 +     41679 I
e Fukomys_damarensis.KN121974.1                             853051  7 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                 12971  0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20199310  0 + 205367284 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Eubalaena_japonica.EubJap_flattened_line_31514             28560  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           14614  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               36967  0 +    498745 C
e Equus_caballus.CM000403.2                               18534938  0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1287130  0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2151465  0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16339377  0 -  41312741 C
e Ellobius_talpinus.LOJH01081419.1                            5041 11 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          25111 11 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       315458  0 +    607251 C
e Eidolon_helvum.KE797349.1                                   1082  0 -     31197 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 35946 23 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    43755 17 +     67921 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    9596  0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  676836  0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8632254 708 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16815191  0 +  35494412 C
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            70652  1 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_15900             3241  7 -     75252 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  38612  7 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    839213  0 +   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129             31859  0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_37019               7004  0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11669751 11 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 54228 11 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           4168  0 +     23735 C
e Condylura_cristata.JH655891.1                           17552956  0 -  53390261 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1260426 17 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            7648  1 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           6017  0 -     25243 C
e Cephalopachus_bancanus.k141_1423433                         8712  0 +     31688 C
e Cavia_tschudii.CavTsc_scaffold_8919                       103394 23 +    143979 I
e Cavia_porcellus.DS562891.1                              18364512 23 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18352252 23 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     97449  0 +    217609 C
e Castor_canadensis.CasCan_scaffold_2074                    140386 13 +    179628 I
e Carollia_perspicillata.CarPer_scaffold_92756                7250 707 -     11696 I
e Carlito_syrichta.NW_007259797.1                           158908  0 -    496798 C
e Capromys_pilorides.CapPil_scaffold_65020                    3692  7 -     12242 I
e Capra_hircus.CM004588.1                                 18065802  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18835001  0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18504142  0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17962845  0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9038369  0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     3674  0 -     43241 C
e CanFam4.chr16                                           17802928  0 -  60362399 C
e Camelus_ferus.KB017975.1                                  405530 47 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2337232 47 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10004760 47 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2824516  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18088566  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1130482  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20277928  0 +  48749331 C
e Bison_bison.KN261452.1                                    204691  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    32056  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         5781  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15195316  0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6909 705 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         681  7 +      5281 I
e Aplodontia_rufa.AprRuf_scaffold_68852                      15968 13 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_43303              2243  0 -     32520 C
e Anoura_caudifer.AnoCau_scaffold_1412                      187499 706 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          680976  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     76281 30 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             82164  0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9513259  0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     74750 11 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           835307  0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                      11904 2 +     62944 ca
s Alouatta_juara.k141_1302312                                 3817 2 +     27940 CA
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_puruensis.k141_362188                              4585 2 +      5663 CA
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             19036 2 +     50774 CA
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  17569 2 -     33861 ca
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            17567 2 -     34016 ca
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299994 2 -   5030052 ca
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             17603 2 -     34685 ca
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               30727 2 -     47192 CA
i Aotus_vociferans.k141_344750                           C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21212263 2 -  21539123 CA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_chamek.k141_1806455                                 29855 2 -     30947 CA
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               11636 2 -     89868 CA
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              16024 2 -     40414 CA
i Ateles_marginatus.k141_803263                          I 4 C 0
s Cacajao_ayresi.k141_552049                                104897 2 -    122966 ca
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   64396 1 +     81800 c-
i Cacajao_calvus.k141_5142                               C 0 I 4
s Cacajao_hosomi.k141_81245                                  33582 2 -     95584 ca
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         57682 2 -    119600 CA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callimico_goeldii.k141_737284                                971 2 -     31217 CA
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                             1267 2 +      5377 CA
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1942 2 -     12329 CA
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Cebus_albifrons.Contig27                                25654442 2 +  26074798 CA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                2386 2 +     28840 ca
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 2115 2 +     14051 CA
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Chiropotes_albinasus.k141_2206961                           3044 2 -     15524 ca
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chiropotes_israelita.k141_747660                          102025 2 +    146308 CA
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          33832 2 -     50570 CA
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Gorilla_beringei.k141_3596273                              21110 2 -     32273 ca
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.CYUI03001204.1                             18705 2 -     63219 ca
i Gorilla_gorilla.CYUI03001204.1                         I 12 I 89
s Hoolock_leuconedys.ctg274                                    440374 2 +    630532 CA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         18083 2 -     38430 CA
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                        9706 2 +     64341 ca
i Leontocebus_fuscicollis.k141_1820339                   C 0 I 432
s Leontocebus_illigeri.k141_1304848                           2048 2 -     35062 ca
i Leontocebus_illigeri.k141_1304848                      C 0 I 431
s Leontocebus_nigricollis.k141_4610752                        9735 2 +     35603 ca
i Leontocebus_nigricollis.k141_4610752                   C 0 I 585
s Leontopithecus_chrysomelas.k141_1519602                    31351 2 +     38576 CA
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         28055 2 +     66356 CA
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Pan_paniscus.KQ411613.1                                    49222 2 +     80009 ca
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189148097 2 + 189151597 ca
i Pan_troglodytes.CM009242.2                             C 0 I 19
s Pithecia_albicans.k141_1476471                              7305 2 +     26961 ca
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          3424 2 +     23417 CA
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                7289 2 +     29694 ca
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          32323 2 +     52772 ca
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           7311 2 +     26198 CA
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3943841 2 +   4542175 CA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            7281 2 -     23490 CA
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Pongo_abelii.CM009266.2                                189136704 2 + 189387572 ca
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9576314 2 +   9816681 CA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Saguinus_bicolor.k141_8081                                  3030 2 +     42994 ca
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_228412                               114 1 +      6556 -a
i Saguinus_imperator.k141_228412                         N 0 C 0
s Saguinus_inustus.k141_3945547                               2674 1 -      8737 -a
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                              2275 1 +      2343 -a
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209476687 2 + 209938924 ca
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                1486 1 -      7576 -a
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119952717 2 - 121099817 ca
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       25053 2 +     46362 CA
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               25150 2 +     45824 CA
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_sciureus.k141_2278166                               4906 2 -     23631 CA
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 25045 1 -     61129 -A
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5422406 2 -   5703754 ca
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          57647 2 -     80660 CA
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
e Cheracebus_torquatus.k141_1170026                          64344 81 +     76511 I
e Cheracebus_regulus.k141_471822                            159875 81 -    216457 I
e Cheracebus_lugens.k141_1393925                              2308 81 +     17877 I
e Cheracebus_lucifer.k141_49986                               2432 81 -     17098 I
e Plecturocebus_moloch.k141_1031110                          25240 158 -     89403 I
e Plecturocebus_miltoni.k141_349282                          27867 148 +     90634 I
e Plecturocebus_hoffmannsi.k141_3303950                      32394 156 +     67232 I
e Plecturocebus_grovesi.k141_2013005                         32198 160 +     60166 I
e Plecturocebus_dubius.k141_1058799                          25236 146 -     87928 I
e Plecturocebus_cupreus.k141_2351393                         11453 152 +     39403 I
e Plecturocebus_cinerascens.k141_1164729                     25783 136 +     88961 I
e Plecturocebus_caligatus.k141_1382851                       24956 158 +     87950 I
e Plecturocebus_brunneus.k141_1495506                        20694 156 +     34906 I
e Plecturocebus_bernhardi.k141_2549090                       11531 156 -     39866 I
e Ateles_paniscus.k141_457735                                23900 0 +     72325 C
e Ateles_belzebuth.k141_445860                               47054 7 -     48001 I
e Echinops_telfairi.JH980293.1                            48781896 0 + 111700974 C
e Otolemur_garnettii.GL873799.1                             699608 7 -   1103335 I
e Otolemur_crassicaudatus.k141_222918                         7369 7 +      8798 I
e Galago_senegalensis.k141_631886                             7575 7 +     11339 I
e Galago_moholi.ctg2040                                     429881 7 -    453645 I
e Saimiri_oerstedii.k141_1487881                             41827 0 -     64574 C
e Mico_schneideri.k141_916733                                        963 0 +      5107 C
e Mico_humeralifer.k141_1346949                               1376 0 +      1399 C
e Mico_argentatus.k141_1024458                                 963 0 -     20047 C
e Cebuella_pygmaea.k141_793006                                 964 0 -     15088 C
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Callithrix_jacchus.pat_scaffold_3                       23593124 0 - 189096842 C
e Callibella_humilis.k141_10318                               1327 0 +     27907 C
e Alouatta_palliata.k141_2135620                              8072 1 +     47717 I
e Alouatta_nigerrima.k141_1929159                             3849 3 +     30492 I
e Alouatta_macconnelli.k141_918386                            4891 3 -      9457 I
e Alouatta_discolor.k141_566626                              15343 0 +     28687 C
e Alouatta_caraya.k141_1701091                                4880 0 -     36483 C
e Alouatta_belzebul.k141_3560514                             11780 0 +     51355 C
e Mus_pahari.LT608297.1                                   31359383 11 -  89631738 I
e Mus_spretus.CM004101.1                                  90757467 11 - 130317789 I
e Mus_musculus.chr8                                       87654680 11 - 129401213 I
e Mus_caroli.LT608237.1                                   84365276 11 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1494 0 +      4343 C
e Loris_tardigradus.ctg83                                  1015593 7 +   6120653 I
e Loris_lydekkerianus.k141_399337                            17882 7 -     33856 I
e Perodicticus_potto.k141_1186926                              740 7 +     10374 I
e Perodicticus_ibeanus.k141_1182643                            362 7 -      3244 I
e Ziphius_cavirostris.ZipCav_flattened_line_1424488            316 0 -       542 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      17784 11 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Xerus_inauris.XerIna_scaffold_2302                          4485 13 +    224448 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 14543 0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5374276 47 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4853040 0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   57781 0 -     77625 C
e Tursiops_truncatus.MRVK01000835.1                       15741683 0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_394                       3042 0 +     70247 C
e Tupaia_chinensis.KB320699.1                              2166677 0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4294973 0 +  10818551 C
e Tragulus_javanicus.TraJav_scaffold_40725                    3973 0 +     27266 C
e Trachypithecus_pileatus.k141_2007326                       13790 0 +     20839 C
e Trachypithecus_phayrei.ctg124                            5944533 0 +   6242583 C
e Trachypithecus_obscurus.k141_190785                        30435 0 +     32220 C
e Trachypithecus_melamera.k141_105182                         2166 0 -      3730 C
e Trachypithecus_leucocephalus.k141_101510                    2207 0 +      9131 C
e Trachypithecus_laotum.k141_907409                          14102 0 -     21137 C
e Trachypithecus_hatinhensis.k141_17719                       2203 0 +      9229 C
e Trachypithecus_germaini.k141_912491                        20575 0 -     27529 C
e Trachypithecus_geei.k141_277701                            53112 0 -     60166 C
e Trachypithecus_francoisi.k141_1412647                      12969 0 -     19997 C
e Trachypithecus_cristatus.k141_580354                       16569 0 +     19930 C
e Trachypithecus_crepusculus.k141_582567                      5581 0 -     12674 C
e Trachypithecus_auratus.k141_722599                         16461 0 -     20410 C
e Tonatia_saurophila.TonSau_scaffold_294                     83346 714 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_85600                    5751 1 +     18632 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              108121 7 +    114563 I
e Theropithecus_gelada.CM009954.1                        186434031 16 + 186847797 I
e Tarsius_wallacei.k141_254427                                4205 0 -     16117 C
e Tarsius_lariang.k141_2201908                               29405 0 +     70052 C
e Tapirus_terrestris.TapTer_scaffold_755                    390789 0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      122308 0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                14780 0 +     41958 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6815048 0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629              21944 0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             33381 0 +     97271 C
e Spermophilus_dauricus.KZ294078.1                         1957430 24 -   3870691 I
e Sorex_araneus.JH798187.1                                13653314 9235 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               5231 0 +   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_42075                     4516 20 -     30804 I
e Semnopithecus_vetulus.k141_910252                           5564 0 +     13763 C
e Semnopithecus_schistaceus.k141_1572284                      5721 0 -     12762 C
e Semnopithecus_priam.k141_638794                            12425 0 -     19483 C
e Semnopithecus_johnii.k141_670120                           12879 0 +     27826 C
e Semnopithecus_hypoleucos.k141_1615806                      32375 0 +     39453 C
e Semnopithecus_entellus.k141_1672505                         5522 0 -     12572 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    156307 109 -    313613 I
e Saiga_tatarica.SaiTat_scaffold_133311                       2552 0 +      9503 C
e Rousettus_aegyptiacus.RouAeg_scaffold_121563                 362 0 +      1157 C
e Rhinopithecus_strykeri.ctg102                            7677378 0 +   7961872 C
e Rhinopithecus_roxellana.NC_044550.1                     91241729 0 - 195417433 C
e Rhinopithecus_bieti.k119_1041714                            1256 0 +      5697 C
e Rhinolophus_sinicus.LVEH01000134.1                        370286 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53574703 11 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                 10094 0 +     55207 C
e Pygathrix_nigripes_a.k141_215492                             20693 0 -     72585 C
e Pygathrix_nigripes_b.ctg100                                 7614788 0 +   7812017 C
e Pygathrix_cinerea.k141_1153803                             20663 0 -     91421 C
e Puma_concolor.QAVW01001104.1                            20277699 0 -  38429054 C
e Pteropus_vampyrus.KN525825.1                             1371089 0 +   4952924 C
e Pteropus_alecto.KB030862.1                              22987529 0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_76658          1314 0 -      3818 C
e Pteronotus_parnellii.KE909381.1                            18135 0 -     21811 C
e Psammomys_obesus.NESX01036370.1                            15300 11 -     21651 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15806 0 -     22811 C
e Presbytis_mitrata.k141_1087752                             10686 0 +     19060 C
e Presbytis_comata.k141_677006                               78850 0 -     81375 C
e Platanista_gangetica.PlaMin_flattened_line_173610           2038 0 +      7680 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             6027 0 +     22620 C
e Piliocolobus_tephrosceles.PDMG02000141.1                14301560 0 -  14605196 C
e Piliocolobus_kirkii.k141_448987                            45324 0 +     51399 C
e Piliocolobus_gordonorum.k141_381342                        43908 0 +     89929 C
e Piliocolobus_badius.k141_1142974                            3771 0 +     68526 C
e Phocoena_phocoena.PhoPho_flattened_line_24159              12502 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_221660                     1293 296 -      2102 I
e Peromyscus_maniculatus.KI615324.1                       18215268 11 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15890 0 -     78924 C
e Papio_ursinus.k141_5274964                                  5400 0 -     11374 C
e Papio_papio.k141_802527                                    14404 12 +     27711 I
e Papio_kindae.k141_1936966                                  11128 10 +     41871 I
e Papio_hamadryas.Contig39                                20569180 10 +  20919399 I
e Papio_cynocephalus.k141_4307930                            12369 6 +     20448 I
e Papio_anubis.CM001495.2                                183448853 9 + 183742232 I
e Pantholops_hodgsonii.KE114653.1                          1269975 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4724629 0 -   8748460 C
e Panthera_pardus.KV860321.1                                267809 0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  154493 0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      179245 0 -    191736 C
e Ovis_aries.CM001607.2                                   17591086 7 +  44047080 I
e Otocyon_megalotis.JAEUCK010005147.1                       466427 0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                       107181400 0 - 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12287 0 -     18566 C
e Orcinus_orca.KB316932.1                                  2785431 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    84561 11 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_7387                      632 3336 +    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          82646 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         148258 0 +    630418 C
e Odobenus_rosmarus.KB229312.1                              509079 0 -   2017862 C
e Octodon_degus.JH651603.1                                  750513 17 +  11899542 I
e Ochotona_princeps.JH802162.1                             1368274 11 +   3988456 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105772019 7 + 199412804 I
e Nycticebus_coucang.k141_1514628                             1564 7 -      5837 I
e Nycticebus_bengalensis.LG01                            102596097 7 - 196305487 I
e Nyctereutes_procyonoides.CAJHUB010000658.1               9153002 0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    760809 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5869540 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20310254 0 +  31847680 C
e Nasalis_larvatus.k141_413338                               20669 0 +     21681 C
e Nannospalax_galili.KL204047.1                            2040230 7 -   3037898 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_44643                         2703 0 +     25416 C
e Myotis_lucifugus.GL429869.1                              3908151 0 -   4330536 C
e Myotis_davidii.KB100139.1                                1592051 0 -   6019432 C
e Myotis_brandtii.KE162005.1                                284733 0 -  10118263 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     73869 7 -     80779 I
e Mustela_putorius.JH418006.1                               304457 0 -  14710649 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              9258 14 +     14296 I
e Murina_feae.MurFea_scaffold_85699                          11248 0 +     14753 C
e Mungos_mungo.MunMun_flattened_line_40893                     677 0 +      5729 C
e Moschus_moschiferus.MosMos_scaffold_13123                   4882 0 +     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 144583 0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    30575 0 -    437263 C
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_55178          483 0 +     26817 C
e Miopithecus_ogouensis.k141_534055                          14601 0 -     28506 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             37669 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1853991 0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                18000 920 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24609 0 -    145209 C
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    6827 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12184766 1004 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 37694 11 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365             12959 0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                        16692 0 -    207569 C
e Marmota_marmota.CZRN01000018.1                          33106629 24 -  40650429 I
e Manis_pentadactyla.KN006162.1                              54034 31 -    317179 I
e Manis_javanica.JSZB01003497.1                              21892 31 +    737560 I
e Mandrillus_sphinx.Contig270                               357030 0 +    752769 C
e Mandrillus_leucophaeus.scaffold280                      23942922 0 -  24302211 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                  6119 0 +    270270 C
e Macaca_tonkeana.k141_1498238                               31343 0 -     45290 C
e Macaca_thibetana.k99_256239                                10697 0 -     24072 C
e Macaca_silenus.Contig273                                  335273 0 -    668171 C
e Macaca_siberu.k141_635500                                  12410 0 -     14993 C
e Macaca_radiata.k141_3680011                                12636 0 +     20474 C
e Macaca_nigra.k141_1655396                                  85624 0 +     89720 C
e Macaca_nemestrina.KQ007038.1                            25463420 0 -  25927173 C
e Macaca_mulatta.NC_041758.1                             186844839 0 + 187317192 C
e Macaca_maura.k141_2733130                                  29772 0 +     37952 C
e Macaca_leonina.k141_3550399                                21187 0 -     29190 C
e Macaca_fuscata.k119_255327                                 11722 0 -     23192 C
e Macaca_fascicularis.k141_814140                            86033 0 -    114318 C
e Macaca_cyclopis.k119_18836                                 18256 0 -     26193 C
e Macaca_assamensis.Contig5                               59681707 0 +  60120075 C
e Macaca_arctoides.k141_2326796                              12460 0 +     40492 C
e Lycaon_pictus.CM007581.1                                17959085 0 -  59628241 C
e Loxodonta_africana.GL010049.1                            4219685 0 -  43346337 C
e Lophocebus_aterrimus.ctg367                              1442643 10 +   1826925 I
e Lipotes_vexillifer.KE559953.1                             271669 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     5119 0 +     14121 I
e Leptonychotes_weddellii.KB714746.1                       3059314 0 +   3914936 C
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Lasiurus_borealis.LasBor_scaffold_32767                    20890 0 -     42476 C
e Kogia_breviceps.KogBre_flattened_line_81059                 2137 0 -     18011 C
e Jaculus_jaculus.JH725527.1                               8279032 12 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_34779                2398 0 -     31341 C
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7525557 13 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      85523 7 +    135385 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            27359 7 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  48617 8 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_101188               2406 0 +      9903 C
e Hipposideros_armiger.JXIK01000431.1                       113840 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               114036 0 +    128679 C
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3353 0 +      7595 C
e Heterocephalus_glaber.JH602082.1                        20664195 469 +  22651954 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 23295 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               245670 0 +    327341 C
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Graphiurus_murinus.GraMur_scaffold_10447                   37413 14 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            35790 14 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     612700 0 -    660261 C
e Galeopterus_variegatus.GalVar_scaffold_108840               6188 0 -      9135 C
e Galagoides_demidoff.k141_1711393                            4830 7 +     41679 I
e Fukomys_damarensis.KN121974.1                             853051 7 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                 12971 0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20199310 0 + 205367284 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Eubalaena_japonica.EubJap_flattened_line_31514             28560 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           14614 0 +    133382 C
e Erythrocebus_patas.Contig38                             21210695 0 -  21539334 C
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               36967 0 +    498745 C
e Equus_caballus.CM000403.2                               18534938 0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1287130 0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2151465 0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16339377 0 -  41312741 C
e Ellobius_talpinus.LOJH01081419.1                            5041 11 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          25111 11 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       315458 0 +    607251 C
e Eidolon_helvum.KE797349.1                                   1082 0 -     31197 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 35946 23 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    43755 17 +     67921 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    9596 0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  676836 0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8632254 708 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16815191 0 +  35494412 C
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            70652 1 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_15900             3241 7 -     75252 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  38612 7 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    839213 0 +   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129             31859 0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_37019               7004 0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11669751 11 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 54228 11 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           4168 0 +     23735 C
e Condylura_cristata.JH655891.1                           17552956 0 -  53390261 C
e Colobus_polykomos.k141_906115                              42610 0 +     84244 C
e Colobus_guereza.LG01                                   199954301 0 + 200372422 C
e Colobus_angolensis.KN981557.1                            1916060 0 +   2368649 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chlorocebus_sabaeus.CM001947.1                         135427526 0 + 135778131 C
e Chlorocebus_pygerythrus.k141_1025673                       20520 0 -     50209 C
e Chlorocebus_aethiops.ctg25                              18434025 0 -  18827391 C
e Chinchilla_lanigera.JH722012.1                           1260426 17 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            7648 1 -      8501 I
e Cercopithecus_roloway.k141_2581234                          6150 10 +     14005 I
e Cercopithecus_pogonias.k141_2303387                         3147 1 +     10558 I
e Cercopithecus_petaurista.k141_807961                       20121 1 -     27947 I
e Cercopithecus_nictitans.k141_1119862                        5575 1 +     13442 I
e Cercopithecus_neglectus.k141_2526306                       45318 0 -     53127 C
e Cercopithecus_mona.ctg39                                21228210 0 -  21565898 C
e Cercopithecus_albogularis.ctg5                                38828701 1 +  39242232 I
e Cercopithecus_lowei.k141_1854285                            8972 0 -     17152 C
e Cercopithecus_hamlyni.k141_187466                          20097 0 -     27936 C
e Cercopithecus_diana.k141_1150327                           12185 7 -     20078 I
e Cercopithecus_cephus.k141_1078548                          17426 1 +     29689 I
e Cercopithecus_ascanius.k141_1024104                        14449 1 -     20310 I
e Cercocebus_torquatus.k141_3057011                          14288 0 +     27781 C
e Cercocebus_lunulatus.k141_3342297                           6189 0 -     14043 C
e Cercocebus_chrysogaster.k141_1540778                        5601 0 +     17872 C
e Cercocebus_atys.KQ010504.1                               4481100 1 +   4669795 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           6017 0 -     25243 C
e Cephalopachus_bancanus.k141_1423433                         8712 0 +     31688 C
e Cavia_tschudii.CavTsc_scaffold_8919                       103394 23 +    143979 I
e Cavia_porcellus.DS562891.1                              18364512 23 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18352252 23 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     97449 0 +    217609 C
e Castor_canadensis.CasCan_scaffold_2074                    140386 13 +    179628 I
e Carollia_perspicillata.CarPer_scaffold_92756                7250 707 -     11696 I
e Carlito_syrichta.NW_007259797.1                           158908 0 -    496798 C
e Capromys_pilorides.CapPil_scaffold_65020                    3692 7 -     12242 I
e Capra_hircus.CM004588.1                                 18065802 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18835001 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18504142 0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17962845 0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9038369 0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     3674 0 -     43241 C
e CanFam4.chr16                                           17802928 0 -  60362399 C
e Camelus_ferus.KB017975.1                                  405530 47 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2337232 47 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10004760 47 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2824516 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18088566 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1130482 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20277928 0 +  48749331 C
e Bison_bison.KN261452.1                                    204691 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    32056 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         5781 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15195316 0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6909 705 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         681 7 +      5281 I
e Aplodontia_rufa.AprRuf_scaffold_68852                      15968 13 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_43303              2243 0 -     32520 C
e Anoura_caudifer.AnoCau_scaffold_1412                      187499 706 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          680976 0 -   2318259 C
e Allochrocebus_solatus.k141_166128                          11450 0 -     12518 C
e Allochrocebus_preussi.k141_1442296                         10578 0 -     18505 C
e Allochrocebus_lhoesti.k141_4309873                         20085 0 -     28001 C
e Allenopithecus_nigroviridis.k141_3361533                   20163 0 -     52922 C
e Allactaga_bullata.AllBul_scaffold_9566                     76281 30 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             82164 0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9513259 0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     74750 11 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           835307 0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                      11906  9 +     62944 c--------acacac---------a---------c
s Alouatta_caraya.k141_1701091                                4880  2 -     36483 C--------A-------------------------
i Alouatta_caraya.k141_1701091                           C 0 I 3
s Alouatta_juara.k141_1302312                                 3819  2 +     27940 C--------A-------------------------
i Alouatta_juara.k141_1302312                            C 0 I 3
s Alouatta_puruensis.k141_362188                              4587  2 +      5663 C--------A-------------------------
i Alouatta_puruensis.k141_362188                         C 0 I 3
s Alouatta_seniculus.k141_117119                             19038  2 +     50774 C--------A-------------------------
i Alouatta_seniculus.k141_117119                         C 0 I 3
s Aotus_azarae.k141_3104676                                  17571 11 -     33861 c--------a-----cacacac--a---------c
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            17569 13 -     34016 c--------a-----cacacacaca---------c
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4299996 11 -   5030052 c--------a-----cacacac--a---------c
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             17605 11 -     34685 c--------a-----cacacac--a---------c
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               30729 11 -     47192 C--------A-------CACACACA---------C
i Aotus_vociferans.k141_344750                           C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21212265 11 -  21539123 C--------A-------CACACACA---------C
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               47061  2 -     48001 ------------------------A---------C
i Ateles_belzebuth.k141_445860                           I 7 C 0
s Ateles_chamek.k141_1806455                                 29857 11 -     30947 C--------A-------CACACACA---------C
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               11638 11 -     89868 C--------A-------CACACACA---------C
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              16026 11 -     40414 C--------A-------CACACACA---------C
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                23900 11 +     72325 C--------A-------CACACACA---------C
i Ateles_paniscus.k141_457735                            C 0 C 0
s Cacajao_ayresi.k141_552049                                104899 11 -    122966 c--------a-----cacagac--a---------c
i Cacajao_ayresi.k141_552049                             C 0 I 6
s Cacajao_calvus.k141_5142                                   64401  2 +     81800 ------------------------a---------c
i Cacajao_calvus.k141_5142                               I 4 I 6
s Cacajao_hosomi.k141_81245                                  33584 11 -     95584 c--------a-----cacagac--a---------c
i Cacajao_hosomi.k141_81245                              C 0 I 6
s Cacajao_melanocephalus.k141_619699                         57684 11 -    119600 C--------A-------CACAGACA---------C
i Cacajao_melanocephalus.k141_619699                     C 0 I 6
s Callibella_humilis.k141_10318                               1327  9 +     27907 ------------------------AACACACA--C
i Callibella_humilis.k141_10318                          C 0 C 0
s Callimico_goeldii.k141_737284                                973 13 -     31217 C--------A-------CACACACA-CA------C
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                             1269 13 +      5377 C--------A-------CACACACA-CA------C
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23593124  9 - 189096842 ------------------------AACACACA--C
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1944 15 -     12329 C--------A-------CACACACA-CACA----C
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Cebuella_pygmaea.k141_793006                                 964  9 -     15088 ------------------------AACACACA--C
i Cebuella_pygmaea.k141_793006                           C 0 C 0
s Cebus_albifrons.Contig27                                25654444 11 +  26074798 C--------A-------CACACACA---------C
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                2388 11 +     28840 c--------a-----cacacac--a---------c
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 2117 10 +     14051 C--------A-------CACATACA----------
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Chiropotes_albinasus.k141_2206961                           3046 11 -     15524 c--------a-----tacaca-a-a---------c
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chiropotes_israelita.k141_747660                          102027 11 +    146308 C--------A-------CACACAGA---------C
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          33834 11 -     50570 C--------A-------CACACAGA---------C
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Gorilla_beringei.k141_3596273                              21112  9 -     32273 c--------acacac---------a---------c
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186343229  9 + 186649187 c--------acacac---------a---------c
i Gorilla_gorilla.LT578341.1                             I 11 I 18
s Hoolock_leuconedys.ctg274                                    440376  4 +    630532 A--------A--------------A---------C
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         18085 11 -     38430 C--------A-------CACACACA---------C
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                       10140  2 +     64341 c--------a-------------------------
i Leontocebus_fuscicollis.k141_1820339                   I 432 I 2
s Leontocebus_illigeri.k141_1304848                           2481  2 -     35062 c--------a-------------------------
i Leontocebus_illigeri.k141_1304848                      I 431 I 2
s Leontocebus_nigricollis.k141_4610752                       10322  2 +     35603 c--------a-------------------------
i Leontocebus_nigricollis.k141_4610752                   I 585 I 2
s Leontopithecus_chrysomelas.k141_1519602                    31353 28 +     38576 CACACATATA-------CACACACAACACACACAC
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         28057 28 +     66356 CAGACATATA-------CACACACAACACACACAC
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Mico_argentatus.k141_1024458                                 963  9 -     20047 ------------------------AACACACA--C
i Mico_argentatus.k141_1024458                           C 0 I 12
s Mico_humeralifer.k141_1346949                               1376  9 +      1399 ------------------------AACACACA--C
i Mico_humeralifer.k141_1346949                          C 0 N 0
s Mico_schneideri.k141_916733                                        963  9 +      5107 ------------------------AACACACA--C
i Mico_schneideri.k141_916733                                  C 0 I 12
s Pan_paniscus.KQ411613.1                                    49224  7 +     80009 c--------acacac--------------------
i Pan_paniscus.KQ411613.1                                C 0 I 1
s Pan_troglodytes.NBAG03001836.1                             35164  8 +     51860 c--------acacac---------a----------
i Pan_troglodytes.NBAG03001836.1                         I 59 C 0
s Pithecia_albicans.k141_1476471                              7307  9 +     26961 c--------a-----cacac----a---------c
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          3426 11 +     23417 C--------A-------CACACATA---------C
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                7291  9 +     29694 c--------a-----cacac----a---------c
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          32325  9 +     52772 c--------a-----cacac----a---------c
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           7313  9 +     26198 C--------A---------CACACA---------C
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3943843 11 +   4542175 C--------A-------CACACATA---------C
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            7283  9 -     23490 C--------A---------CACACA---------C
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Pongo_abelii.CM009266.2                                189136706  4 + 189387572 c--------a--------------a---------a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9576316  4 +   9816681 C--------A--------------A---------A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Saguinus_bicolor.k141_8081                                  3032  2 +     42994 c--------a-------------------------
i Saguinus_bicolor.k141_8081                             C 0 I 2
s Saguinus_imperator.k141_228412                               115  2 +      6556 c--------a-------------------------
i Saguinus_imperator.k141_228412                         C 0 I 2
s Saguinus_inustus.k141_3945547                               2675  2 -      8737 c--------a-------------------------
i Saguinus_inustus.k141_3945547                          C 0 I 2
s Saguinus_labiatus.k141_4004060                              2276  2 +      2343 c--------a-------------------------
i Saguinus_labiatus.k141_4004060                         C 0 I 2
s Saguinus_midas.LG03                                    209476689  2 + 209938924 c--------a-------------------------
i Saguinus_midas.LG03                                    C 0 I 2
s Saguinus_mystax.k141_4699220                                1487  2 -      7576 c--------a-------------------------
i Saguinus_mystax.k141_4699220                           C 0 I 2
s Saimiri_boliviensis.NW_024100920.1                     119952719 11 - 121099817 c--------a-----cacacac--a---------c
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       25055 11 +     46362 C--------A-------CACACACA---------C
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               25152 11 +     45824 C--------A-------CACACACA---------C
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             41827  2 -     64574 ------------------------A---------C
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4908  2 -     23631 C--------A-------------------------
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 25046 11 -     61129 C--------A-------CACACACA---------C
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5422408 13 -   5703754 c------aca-----cacacac--a---------c
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          57649 11 -     80660 C--------A-------CACACACA---------C
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
e Cheracebus_torquatus.k141_1170026                          64344 81 +     76511 I
e Cheracebus_regulus.k141_471822                            159875 81 -    216457 I
e Cheracebus_lugens.k141_1393925                              2308 81 +     17877 I
e Cheracebus_lucifer.k141_49986                               2432 81 -     17098 I
e Plecturocebus_moloch.k141_1031110                          25240 158 -     89403 I
e Plecturocebus_miltoni.k141_349282                          27867 148 +     90634 I
e Plecturocebus_hoffmannsi.k141_3303950                      32394 156 +     67232 I
e Plecturocebus_grovesi.k141_2013005                         32198 160 +     60166 I
e Plecturocebus_dubius.k141_1058799                          25236 146 -     87928 I
e Plecturocebus_cupreus.k141_2351393                         11453 152 +     39403 I
e Plecturocebus_cinerascens.k141_1164729                     25783 136 +     88961 I
e Plecturocebus_caligatus.k141_1382851                       24956 158 +     87950 I
e Plecturocebus_brunneus.k141_1495506                        20694 156 +     34906 I
e Plecturocebus_bernhardi.k141_2549090                       11531 156 -     39866 I
e Echinops_telfairi.JH980293.1                            48781896  0 + 111700974 C
e Otolemur_garnettii.GL873799.1                             699608  7 -   1103335 I
e Otolemur_crassicaudatus.k141_222918                         7369  7 +      8798 I
e Galago_senegalensis.k141_631886                             7575  7 +     11339 I
e Galago_moholi.ctg2040                                     429881  7 -    453645 I
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Alouatta_palliata.k141_2135620                              8072  1 +     47717 I
e Alouatta_nigerrima.k141_1929159                             3849  3 +     30492 I
e Alouatta_macconnelli.k141_918386                            4891  3 -      9457 I
e Alouatta_discolor.k141_566626                              15343  0 +     28687 C
e Alouatta_belzebul.k141_3560514                             11780  0 +     51355 C
e Mus_pahari.LT608297.1                                   31359383 11 -  89631738 I
e Mus_spretus.CM004101.1                                  90757467 11 - 130317789 I
e Mus_musculus.chr8                                       87654680 11 - 129401213 I
e Mus_caroli.LT608237.1                                   84365276 11 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1494  0 +      4343 C
e Loris_tardigradus.ctg83                                  1015593  7 +   6120653 I
e Loris_lydekkerianus.k141_399337                            17882  7 -     33856 I
e Perodicticus_potto.k141_1186926                              740  7 +     10374 I
e Perodicticus_ibeanus.k141_1182643                            362  7 -      3244 I
e Ziphius_cavirostris.ZipCav_flattened_line_1424488            316  0 -       542 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      17784 11 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Xerus_inauris.XerIna_scaffold_2302                          4485 13 +    224448 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 14543  0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5374276 47 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4853040  0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   57781  0 -     77625 C
e Tursiops_truncatus.MRVK01000835.1                       15741683  0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_394                       3042  0 +     70247 C
e Tupaia_chinensis.KB320699.1                              2166677  0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4294973  0 +  10818551 C
e Tragulus_javanicus.TraJav_scaffold_40725                    3973  0 +     27266 C
e Trachypithecus_pileatus.k141_2007326                       13790  0 +     20839 C
e Trachypithecus_phayrei.ctg124                            5944533  0 +   6242583 C
e Trachypithecus_obscurus.k141_190785                        30435  0 +     32220 C
e Trachypithecus_melamera.k141_105182                         2166  0 -      3730 C
e Trachypithecus_leucocephalus.k141_101510                    2207  0 +      9131 C
e Trachypithecus_laotum.k141_907409                          14102  0 -     21137 C
e Trachypithecus_hatinhensis.k141_17719                       2203  0 +      9229 C
e Trachypithecus_germaini.k141_912491                        20575  0 -     27529 C
e Trachypithecus_geei.k141_277701                            53112  0 -     60166 C
e Trachypithecus_francoisi.k141_1412647                      12969  0 -     19997 C
e Trachypithecus_cristatus.k141_580354                       16569  0 +     19930 C
e Trachypithecus_crepusculus.k141_582567                      5581  0 -     12674 C
e Trachypithecus_auratus.k141_722599                         16461  0 -     20410 C
e Tonatia_saurophila.TonSau_scaffold_294                     83346 714 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_85600                    5751  1 +     18632 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              108121  7 +    114563 I
e Theropithecus_gelada.CM009954.1                        186434031 16 + 186847797 I
e Tarsius_wallacei.k141_254427                                4205  0 -     16117 C
e Tarsius_lariang.k141_2201908                               29405  0 +     70052 C
e Tapirus_terrestris.TapTer_scaffold_755                    390789  0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      122308  0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                14780  0 +     41958 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6815048  0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629              21944  0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             33381  0 +     97271 C
e Spermophilus_dauricus.KZ294078.1                         1957430 24 -   3870691 I
e Sorex_araneus.JH798187.1                                13653314 9235 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               5231  0 +   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_42075                     4516 20 -     30804 I
e Semnopithecus_vetulus.k141_910252                           5564  0 +     13763 C
e Semnopithecus_schistaceus.k141_1572284                      5721  0 -     12762 C
e Semnopithecus_priam.k141_638794                            12425  0 -     19483 C
e Semnopithecus_johnii.k141_670120                           12879  0 +     27826 C
e Semnopithecus_hypoleucos.k141_1615806                      32375  0 +     39453 C
e Semnopithecus_entellus.k141_1672505                         5522  0 -     12572 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    156307 109 -    313613 I
e Saiga_tatarica.SaiTat_scaffold_133311                       2552  0 +      9503 C
e Rousettus_aegyptiacus.RouAeg_scaffold_121563                 362  0 +      1157 C
e Rhinopithecus_strykeri.ctg102                            7677378  0 +   7961872 C
e Rhinopithecus_roxellana.NC_044550.1                     91241729  0 - 195417433 C
e Rhinopithecus_bieti.k119_1041714                            1256  0 +      5697 C
e Rhinolophus_sinicus.LVEH01000134.1                        370286  0 -   3329780 C
e Rattus_norvegicus.chr16                                 53574703 11 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                 10094  0 +     55207 C
e Pygathrix_nigripes_a.k141_215492                             20693  0 -     72585 C
e Pygathrix_nigripes_b.ctg100                                 7614788  0 +   7812017 C
e Pygathrix_cinerea.k141_1153803                             20663  0 -     91421 C
e Puma_concolor.QAVW01001104.1                            20277699  0 -  38429054 C
e Pteropus_vampyrus.KN525825.1                             1371089  0 +   4952924 C
e Pteropus_alecto.KB030862.1                              22987529  0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_76658          1314  0 -      3818 C
e Pteronotus_parnellii.KE909381.1                            18135  0 -     21811 C
e Psammomys_obesus.NESX01036370.1                            15300 11 -     21651 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15806  0 -     22811 C
e Presbytis_mitrata.k141_1087752                             10686  0 +     19060 C
e Presbytis_comata.k141_677006                               78850  0 -     81375 C
e Platanista_gangetica.PlaMin_flattened_line_173610           2038  0 +      7680 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             6027  0 +     22620 C
e Piliocolobus_tephrosceles.PDMG02000141.1                14301560  0 -  14605196 C
e Piliocolobus_kirkii.k141_448987                            45324  0 +     51399 C
e Piliocolobus_gordonorum.k141_381342                        43908  0 +     89929 C
e Piliocolobus_badius.k141_1142974                            3771  0 +     68526 C
e Phocoena_phocoena.PhoPho_flattened_line_24159              12502  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_221660                     1293 296 -      2102 I
e Peromyscus_maniculatus.KI615324.1                       18215268 11 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15890  0 -     78924 C
e Papio_ursinus.k141_5274964                                  5400  0 -     11374 C
e Papio_papio.k141_802527                                    14404 12 +     27711 I
e Papio_kindae.k141_1936966                                  11128 10 +     41871 I
e Papio_hamadryas.Contig39                                20569180 10 +  20919399 I
e Papio_cynocephalus.k141_4307930                            12369  6 +     20448 I
e Papio_anubis.CM001495.2                                183448853  9 + 183742232 I
e Pantholops_hodgsonii.KE114653.1                          1269975  0 -   2937107 C
e Panthera_tigris.KE722367.1                               4724629  0 -   8748460 C
e Panthera_pardus.KV860321.1                                267809  0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  154493  0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      179245  0 -    191736 C
e Ovis_aries.CM001607.2                                   17591086  7 +  44047080 I
e Otocyon_megalotis.JAEUCK010005147.1                       466427  0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                       107181400  0 - 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12287  0 -     18566 C
e Orcinus_orca.KB316932.1                                  2785431  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    84561 11 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_7387                      632 3336 +    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          82646  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         148258  0 +    630418 C
e Odobenus_rosmarus.KB229312.1                              509079  0 -   2017862 C
e Octodon_degus.JH651603.1                                  750513 17 +  11899542 I
e Ochotona_princeps.JH802162.1                             1368274 11 +   3988456 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105772019  7 + 199412804 I
e Nycticebus_coucang.k141_1514628                             1564  7 -      5837 I
e Nycticebus_bengalensis.LG01                            102596097  7 - 196305487 I
e Nyctereutes_procyonoides.CAJHUB010000658.1               9153002  0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    760809  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5869540  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20310254  0 +  31847680 C
e Nasalis_larvatus.k141_413338                               20669  0 +     21681 C
e Nannospalax_galili.KL204047.1                            2040230  7 -   3037898 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_44643                         2703  0 +     25416 C
e Myotis_lucifugus.GL429869.1                              3908151  0 -   4330536 C
e Myotis_davidii.KB100139.1                                1592051  0 -   6019432 C
e Myotis_brandtii.KE162005.1                                284733  0 -  10118263 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     73869  7 -     80779 I
e Mustela_putorius.JH418006.1                               304457  0 -  14710649 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              9258 14 +     14296 I
e Murina_feae.MurFea_scaffold_85699                          11248  0 +     14753 C
e Mungos_mungo.MunMun_flattened_line_40893                     677  0 +      5729 C
e Moschus_moschiferus.MosMos_scaffold_13123                   4882  0 +     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 144583  0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    30575  0 -    437263 C
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_55178          483  0 +     26817 C
e Miopithecus_ogouensis.k141_534055                          14601  0 -     28506 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             37669  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1853991  0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                18000 920 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24609  0 -    145209 C
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    6827  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12184766 1004 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 37694 11 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365             12959  0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                        16692  0 -    207569 C
e Marmota_marmota.CZRN01000018.1                          33106629 24 -  40650429 I
e Manis_pentadactyla.KN006162.1                              54034 31 -    317179 I
e Manis_javanica.JSZB01003497.1                              21892 31 +    737560 I
e Mandrillus_sphinx.Contig270                               357030  0 +    752769 C
e Mandrillus_leucophaeus.scaffold280                      23942922  0 -  24302211 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                  6119  0 +    270270 C
e Macaca_tonkeana.k141_1498238                               31343  0 -     45290 C
e Macaca_thibetana.k99_256239                                10697  0 -     24072 C
e Macaca_silenus.Contig273                                  335273  0 -    668171 C
e Macaca_siberu.k141_635500                                  12410  0 -     14993 C
e Macaca_radiata.k141_3680011                                12636  0 +     20474 C
e Macaca_nigra.k141_1655396                                  85624  0 +     89720 C
e Macaca_nemestrina.KQ007038.1                            25463420  0 -  25927173 C
e Macaca_mulatta.NC_041758.1                             186844839  0 + 187317192 C
e Macaca_maura.k141_2733130                                  29772  0 +     37952 C
e Macaca_leonina.k141_3550399                                21187  0 -     29190 C
e Macaca_fuscata.k119_255327                                 11722  0 -     23192 C
e Macaca_fascicularis.k141_814140                            86033  0 -    114318 C
e Macaca_cyclopis.k119_18836                                 18256  0 -     26193 C
e Macaca_assamensis.Contig5                               59681707  0 +  60120075 C
e Macaca_arctoides.k141_2326796                              12460  0 +     40492 C
e Lycaon_pictus.CM007581.1                                17959085  0 -  59628241 C
e Loxodonta_africana.GL010049.1                            4219685  0 -  43346337 C
e Lophocebus_aterrimus.ctg367                              1442643 10 +   1826925 I
e Lipotes_vexillifer.KE559953.1                             271669  0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     5119  0 +     14121 I
e Leptonychotes_weddellii.KB714746.1                       3059314  0 +   3914936 C
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Lasiurus_borealis.LasBor_scaffold_32767                    20890  0 -     42476 C
e Kogia_breviceps.KogBre_flattened_line_81059                 2137  0 -     18011 C
e Jaculus_jaculus.JH725527.1                               8279032 12 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_34779                2398  0 -     31341 C
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7525557 13 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      85523  7 +    135385 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            27359  7 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  48617  8 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_101188               2406  0 +      9903 C
e Hipposideros_armiger.JXIK01000431.1                       113840  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               114036  0 +    128679 C
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3353  0 +      7595 C
e Heterocephalus_glaber.JH602082.1                        20664195 469 +  22651954 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 23295  0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               245670  0 +    327341 C
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Graphiurus_murinus.GraMur_scaffold_10447                   37413 14 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            35790 14 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     612700  0 -    660261 C
e Galeopterus_variegatus.GalVar_scaffold_108840               6188  0 -      9135 C
e Galagoides_demidoff.k141_1711393                            4830  7 +     41679 I
e Fukomys_damarensis.KN121974.1                             853051  7 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                 12971  0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20199310  0 + 205367284 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Eubalaena_japonica.EubJap_flattened_line_31514             28560  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           14614  0 +    133382 C
e Erythrocebus_patas.Contig38                             21210695  0 -  21539334 C
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               36967  0 +    498745 C
e Equus_caballus.CM000403.2                               18534938  0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1287130  0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2151465  0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16339377  0 -  41312741 C
e Ellobius_talpinus.LOJH01081419.1                            5041 11 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          25111 11 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       315458  0 +    607251 C
e Eidolon_helvum.KE797349.1                                   1082  0 -     31197 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 35946 23 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    43755 17 +     67921 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    9596  0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  676836  0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8632254 708 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16815191  0 +  35494412 C
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            70652  1 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_15900             3241  7 -     75252 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  38612  7 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    839213  0 +   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129             31859  0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_37019               7004  0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11669751 11 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 54228 11 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           4168  0 +     23735 C
e Condylura_cristata.JH655891.1                           17552956  0 -  53390261 C
e Colobus_polykomos.k141_906115                              42610  0 +     84244 C
e Colobus_guereza.LG01                                   199954301  0 + 200372422 C
e Colobus_angolensis.KN981557.1                            1916060  0 +   2368649 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chlorocebus_sabaeus.CM001947.1                         135427526  0 + 135778131 C
e Chlorocebus_pygerythrus.k141_1025673                       20520  0 -     50209 C
e Chlorocebus_aethiops.ctg25                              18434025  0 -  18827391 C
e Chinchilla_lanigera.JH722012.1                           1260426 17 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            7648  1 -      8501 I
e Cercopithecus_roloway.k141_2581234                          6150 10 +     14005 I
e Cercopithecus_pogonias.k141_2303387                         3147  1 +     10558 I
e Cercopithecus_petaurista.k141_807961                       20121  1 -     27947 I
e Cercopithecus_nictitans.k141_1119862                        5575  1 +     13442 I
e Cercopithecus_neglectus.k141_2526306                       45318  0 -     53127 C
e Cercopithecus_mona.ctg39                                21228210  0 -  21565898 C
e Cercopithecus_albogularis.ctg5                                38828701  1 +  39242232 I
e Cercopithecus_lowei.k141_1854285                            8972  0 -     17152 C
e Cercopithecus_hamlyni.k141_187466                          20097  0 -     27936 C
e Cercopithecus_diana.k141_1150327                           12185  7 -     20078 I
e Cercopithecus_cephus.k141_1078548                          17426  1 +     29689 I
e Cercopithecus_ascanius.k141_1024104                        14449  1 -     20310 I
e Cercocebus_torquatus.k141_3057011                          14288  0 +     27781 C
e Cercocebus_lunulatus.k141_3342297                           6189  0 -     14043 C
e Cercocebus_chrysogaster.k141_1540778                        5601  0 +     17872 C
e Cercocebus_atys.KQ010504.1                               4481100  1 +   4669795 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           6017  0 -     25243 C
e Cephalopachus_bancanus.k141_1423433                         8712  0 +     31688 C
e Cavia_tschudii.CavTsc_scaffold_8919                       103394 23 +    143979 I
e Cavia_porcellus.DS562891.1                              18364512 23 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18352252 23 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     97449  0 +    217609 C
e Castor_canadensis.CasCan_scaffold_2074                    140386 13 +    179628 I
e Carollia_perspicillata.CarPer_scaffold_92756                7250 707 -     11696 I
e Carlito_syrichta.NW_007259797.1                           158908  0 -    496798 C
e Capromys_pilorides.CapPil_scaffold_65020                    3692  7 -     12242 I
e Capra_hircus.CM004588.1                                 18065802  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18835001  0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18504142  0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17962845  0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9038369  0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     3674  0 -     43241 C
e CanFam4.chr16                                           17802928  0 -  60362399 C
e Camelus_ferus.KB017975.1                                  405530 47 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2337232 47 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10004760 47 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2824516  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18088566  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1130482  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20277928  0 +  48749331 C
e Bison_bison.KN261452.1                                    204691  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    32056  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         5781  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15195316  0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6909 705 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         681  7 +      5281 I
e Aplodontia_rufa.AprRuf_scaffold_68852                      15968 13 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_43303              2243  0 -     32520 C
e Anoura_caudifer.AnoCau_scaffold_1412                      187499 706 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          680976  0 -   2318259 C
e Allochrocebus_solatus.k141_166128                          11450  0 -     12518 C
e Allochrocebus_preussi.k141_1442296                         10578  0 -     18505 C
e Allochrocebus_lhoesti.k141_4309873                         20085  0 -     28001 C
e Allenopithecus_nigroviridis.k141_3361533                   20163  0 -     52922 C
e Allactaga_bullata.AllBul_scaffold_9566                     76281 30 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             82164  0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9513259  0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     74750 11 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           835307  0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                      11915 13 +     62944 ac----ac----------aC------C----------ACACA------C
s Allenopithecus_nigroviridis.k141_3361533                   20163  9 -     52922 -------C----------A-------C----------ACACA------A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         20085  9 -     28001 -------C----------A-------C----------ACACA------A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                         10578  9 -     18505 -------C----------A-------C----------ACACA------A
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                          11450  9 -     12518 -------C----------A-------C----------ACACA------G
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_caraya.k141_1701091                                4885  6 -     36483 ------AC----------A-------C----------GC----------
i Alouatta_caraya.k141_1701091                           I 3 C 0
s Alouatta_juara.k141_1302312                                 3824  6 +     27940 ------AC----------A-------C----------AC----------
i Alouatta_juara.k141_1302312                            I 3 C 0
s Alouatta_macconnelli.k141_918386                            4894  6 -      9457 ------AC----------A-------C----------AC----------
i Alouatta_macconnelli.k141_918386                       I 3 C 0
s Alouatta_nigerrima.k141_1929159                             3852  6 +     30492 ------AC----------A-------C----------AC----------
i Alouatta_nigerrima.k141_1929159                        I 3 C 0
s Alouatta_palliata.k141_2135620                              8073  6 +     47717 ------AC----------A-------C----------AC----------
i Alouatta_palliata.k141_2135620                         I 1 C 0
s Alouatta_seniculus.k141_117119                             19043  6 +     50774 ------AC----------A-------C----------AC----------
i Alouatta_seniculus.k141_117119                         I 3 C 0
s Aotus_azarae.k141_3104676                                  17582  3 -     33861 ac----a------------------------------------------
i Aotus_azarae.k141_3104676                              C 0 I 6
s Aotus_griseimembra.k141_2240599                            17582  3 -     34016 ac----a------------------------------------------
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_trivirgatus.k141_2152450                             17616  3 -     34685 at----a------------------------------------------
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               30740  3 -     47192 AT----A------------------------------------------
i Aotus_vociferans.k141_344750                           C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21212276  8 -  21539123 AC----AC----------A-------C----------AC----------
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               47063  8 -     48001 AC----AC----------A-------C----------AC----------
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 29868  8 -     30947 AC----AC----------A-------C----------AC----------
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               11649  8 -     89868 AC----AC----------A-------C----------AC----------
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              16037  8 -     40414 AC----AC----------A-------C----------AC----------
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                23911  8 +     72325 AC----AC----------A-------C----------AC----------
i Ateles_paniscus.k141_457735                            C 0 C 0
s Cacajao_ayresi.k141_552049                                104916  6 -    122966 -------------------------------------acaca------c
i Cacajao_ayresi.k141_552049                             I 6 I 11
s Cacajao_calvus.k141_5142                                   64409  6 +     81800 -------------------------------------acaca------a
i Cacajao_calvus.k141_5142                               I 6 I 11
s Cacajao_hosomi.k141_81245                                  33601  6 -     95584 -------------------------------------acaca------c
i Cacajao_hosomi.k141_81245                              I 6 I 11
s Cacajao_melanocephalus.k141_619699                         57701  6 -    119600 -------------------------------------ACACA------C
i Cacajao_melanocephalus.k141_619699                     I 6 I 9
s Callibella_humilis.k141_10318                               1336  3 +     27907 AC----A------------------------------------------
i Callibella_humilis.k141_10318                          C 0 C 0
s Callimico_goeldii.k141_737284                                986  3 -     31217 CC----A------------------------------------------
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                             1282  3 +      5377 AC----A------------------------------------------
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23593133  3 - 189096842 AC----A------------------------------------------
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1959  3 -     12329 AC----A------------------------------------------
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Cebuella_pygmaea.k141_793006                                 973  3 -     15088 AC----A------------------------------------------
i Cebuella_pygmaea.k141_793006                           C 0 C 0
s Cebus_albifrons.Contig27                                25654455  7 +  26074798 AC----AC----------A-------C----------A-----------
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                2399  7 +     28840 ac----ac----------a-------c----------a-----------
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cercocebus_atys.KQ010504.1                               4481101  6 +   4669795 -------------------------------------acaca------a
i Cercocebus_atys.KQ010504.1                             I 1 C 0
s Cercocebus_chrysogaster.k141_1540778                        5601 19 +     17872 -------C----------A-------CACACACACACACACA------A
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           6189 19 -     14043 -------CACACACACACA-------C----------ACACA------A
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          14288 13 +     27781 -------C----------A-------CACAC------ACACA------A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        14450  6 -     20310 -------------------------------------ACACA------A
i Cercopithecus_ascanius.k141_1024104                    I 1 C 0
s Cercopithecus_cephus.k141_1078548                          17427  6 +     29689 -------------------------------------ACACA------A
i Cercopithecus_cephus.k141_1078548                      I 1 C 0
s Cercopithecus_diana.k141_1150327                           12192  2 -     20078 -----------------------------------------A------A
i Cercopithecus_diana.k141_1150327                       I 7 C 0
s Cercopithecus_hamlyni.k141_187466                          20097  9 -     27936 -------C----------A-------C----------ACACA------A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            8972 13 -     17152 -------CACAC------A-------C----------ACACA------A
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38828702  6 +  39242232 -------------------------------------ACACA------A
i Cercopithecus_albogularis.ctg5                               I 1 C 0
s Cercopithecus_mona.ctg39                                21228210 13 -  21565898 -------CACAC------A-------C----------ACACA------C
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       45318  9 -     53127 -------C----------A-------C----------ACACA------A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        5576  6 +     13442 -------------------------------------ACACA------A
i Cercopithecus_nictitans.k141_1119862                   I 1 C 0
s Cercopithecus_petaurista.k141_807961                       20122  6 -     27947 -------------------------------------ACACA------A
i Cercopithecus_petaurista.k141_807961                   I 1 C 0
s Cercopithecus_pogonias.k141_2303387                         3148  6 +     10558 -------------------------------------ACACA------A
i Cercopithecus_pogonias.k141_2303387                    I 1 C 0
s Cercopithecus_roloway.k141_2581234                          6160  9 +     14005 -------C----------A-------C----------ACACA------A
i Cercopithecus_roloway.k141_2581234                     I 10 C 0
s Chiropotes_albinasus.k141_2206961                           3057  5 -     15524 at----ac----------a------------------------------
i Chiropotes_albinasus.k141_2206961                      C 0 I 9
s Chiropotes_israelita.k141_747660                          102038  5 +    146308 AC----AC----------A------------------------------
i Chiropotes_israelita.k141_747660                       C 0 I 2
s Chiropotes_sagulatus.k141_1421488                          33845  5 -     50570 AC----AC----------A------------------------------
i Chiropotes_sagulatus.k141_1421488                      C 0 I 12
s Chlorocebus_aethiops.ctg25                              18434025  9 -  18827391 -------C----------A-------C----------ACACA------A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       20520  9 -     50209 -------C----------A-------C----------ACACA------A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135427526  9 + 135778131 -------c----------a-------c----------acaca------a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1916060 12 +   2368649 aa----ac----------a-------c----------acaca------a
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199954301 12 + 200372422 AA----AC----------A-------C----------ACACA------A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              42610 12 +     84244 AA----AC----------A-------C----------ACACA------A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Erythrocebus_patas.Contig38                             21210695  9 -  21539334 -------C----------A-------C----------ACACA------A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Gorilla_beringei.k141_3596273                              21121 19 -     32273 ac----ac----------acacaaCAC----------ACACA------C
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578336.1                              33192725 19 -  33314783 ac----ac----------acacaacac----------acaca------c
i Gorilla_gorilla.LT578336.1                             I 11 I 797
s Hoolock_leuconedys.ctg274                                    440380 12 +    630532 AC----AC----------A-------C----------ACACA------C
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         18096  8 -     38430 AC----AC----------A-------C----------AC----------
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                       10144  2 +     64341 -c----a------------------------------------------
i Leontocebus_fuscicollis.k141_1820339                   I 2 C 0
s Leontocebus_illigeri.k141_1304848                           2485  2 -     35062 -c----a------------------------------------------
i Leontocebus_illigeri.k141_1304848                      I 2 C 0
s Leontocebus_nigricollis.k141_4610752                       10326  2 +     35603 -c----a------------------------------------------
i Leontocebus_nigricollis.k141_4610752                   I 2 C 0
s Leontopithecus_chrysomelas.k141_1519602                    31381  3 +     38576 AC----A------------------------------------------
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         28085  3 +     66356 AC----A------------------------------------------
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lophocebus_aterrimus.ctg367                              1442653  9 +   1826925 -------C----------A-------C----------ACACA------A
i Lophocebus_aterrimus.ctg367                            I 10 C 0
s Macaca_arctoides.k141_2326796                              12460  9 +     40492 -------C----------A-------C----------ACACA------A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59681707  9 +  60120075 -------C----------A-------C----------ACACA------A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 18256 11 -     26193 -------CAC--------A-------C----------ACACA------A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            86033  9 -    114318 -------C----------A-------C----------ACACA------A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 11722  9 -     23192 -------C----------A-------C----------ACACA------A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                21187  9 -     29190 -------C----------A-------C----------ACACA------A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  29772  9 +     37952 -------C----------A-------C----------ACACA------A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186844839  9 + 187317192 -------c----------a-------c----------acaca------a
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25463420  9 -  25927173 -------c----------a-------c----------acaca------a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  85624  9 +     89720 -------C----------A-------C----------ACACA------A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                12636  9 +     20474 -------C----------A-------C----------ACACA------A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  12410  9 -     14993 -------C----------A-------C----------ACACA------A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  335273  9 -    668171 -------C----------A-------C----------ACACA------A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                10697  9 -     24072 -------C----------A-------C----------ACACA------A
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               31343  9 -     45290 -------C----------A-------C----------ACACA------A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23942922 15 -  24302211 -------C----------A-------C----------ACACACACAAAA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               357030  9 +    752769 -------C----------A-------C----------ACACA------A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Miopithecus_ogouensis.k141_534055                          14601  6 -     28506 -------------------------------------ACACA------A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mico_argentatus.k141_1024458                                 984  3 -     20047 AC----A------------------------------------------
i Mico_argentatus.k141_1024458                           I 12 C 0
s Mico_humeralifer.k141_700707                                  21  3 +      5224 AC----A------------------------------------------
i Mico_humeralifer.k141_700707                           N 0 C 0
s Mico_schneideri.k141_916733                                        984  3 +      5107 AC----A------------------------------------------
i Mico_schneideri.k141_916733                                  I 12 C 0
s Nasalis_larvatus.k141_413338                               20669 12 +     21681 AA----AC----------A-------C----------ATACA------A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Pan_paniscus.KQ411613.1                                    49232  6 +     80009 ac----ac----------ac-----------------------------
i Pan_paniscus.KQ411613.1                                I 1 I 4
s Pan_troglodytes.NBAG03001836.1                             35172  6 +     51860 ac----ac----------ac-----------------------------
i Pan_troglodytes.NBAG03001836.1                         C 0 I 200
s Papio_anubis.CM001495.2                                183448862  8 + 183742232 -------c----------a-------c-----------caca------a
i Papio_anubis.CM001495.2                                I 9 C 0
s Papio_cynocephalus.k141_4307930                            12375  9 +     20448 -------C----------A-------C----------ACACA------A
i Papio_cynocephalus.k141_4307930                        I 6 C 0
s Papio_hamadryas.Contig39                                20569190  9 +  20919399 -------C----------A-------C----------ACACA------A
i Papio_hamadryas.Contig39                               I 10 C 0
s Papio_kindae.k141_1936966                                  11138  9 +     41871 -------C----------A-------C----------ACACA------A
i Papio_kindae.k141_1936966                              I 10 C 0
s Papio_papio.k141_802527                                    14416  9 +     27711 -------C----------A-------C----------ACACA------A
i Papio_papio.k141_802527                                I 12 C 0
s Papio_ursinus.k141_5274964                                  5400  6 -     11374 -------------------------------------ACACA------A
i Papio_ursinus.k141_5274964                             C 0 C 0
s Piliocolobus_badius.k141_1142974                            3771 10 +     68526 ------AC----------A-------C----------ACACA------A
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        43908  8 +     89929 ------AC----------A-------C----------AC--A------A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            45324  8 +     51399 ------AC----------A-------C----------AC--A------A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14301560  8 -  14605196 ------ac----------a-------c----------ac--a------a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1476471                              7316 12 +     26961 ac----ac----------a-------c----------aaaac------c
i Pithecia_albicans.k141_1476471                         C 0 I 11
s Pithecia_chrysocephala.k141_839575                          3437 12 +     23417 AC----AC----------A-------C----------AAAAA------C
i Pithecia_chrysocephala.k141_839575                     C 0 I 11
s Pithecia_hirsuta.k141_305604                                7300 12 +     29694 ac----ac----------a-------c----------aaaac------c
i Pithecia_hirsuta.k141_305604                           C 0 I 11
s Pithecia_mittermeieri.k141_446740                          32334 16 +     52772 acacacac----------a-------c----------aaaac------c
i Pithecia_mittermeieri.k141_446740                      C 0 I 11
s Pithecia_pissinattii.k141_1824269                           7322 16 +     26198 ACACACAC----------A-------C----------AAAAC------C
i Pithecia_pissinattii.k141_1824269                      C 0 I 11
s Pithecia_pithecia.tarseq_165                             3943854  5 +   4542175 AC----AC----------A------------------------------
i Pithecia_pithecia.tarseq_165                           C 0 I 17
s Pithecia_vanzolinii.k141_1697688                            7292 16 -     23490 ACACACAC----------A-------C----------AAAAC------C
i Pithecia_vanzolinii.k141_1697688                       C 0 I 11
s Pongo_abelii.CM009266.2                                189136710 12 + 189387572 ac----ac----------a-------c----------acaca------t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9576320 12 +   9816681 AC----AC----------A-------C----------ACACA------T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               78850 12 -     81375 AA----AC----------A-------C----------ATACA------A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                             10686 12 +     19060 AA----AC----------A-------C----------ATACA------A
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Pygathrix_cinerea.k141_1153803                             20663 12 -     91421 AA----AC----------A-------C----------ATACA------A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7614788 12 +   7812017 AA----AC----------A-------C----------ATACA------A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             20693 12 -     72585 AA----AC----------A-------C----------ATACA------A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_1041714                            1256 12 +      5697 AA----AC----------A-------C----------ATACA------A
i Rhinopithecus_bieti.k119_1041714                       C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91241729 12 - 195417433 aa----ac----------a-------c----------ataca------a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7677378 12 +   7961872 AA----AC----------A-------C----------ATACA------A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_8081                                  3036  2 +     42994 -c----a------------------------------------------
i Saguinus_bicolor.k141_8081                             I 2 C 0
s Saguinus_imperator.k141_228412                               119  2 +      6556 -c----a------------------------------------------
i Saguinus_imperator.k141_228412                         I 2 C 0
s Saguinus_inustus.k141_3945547                               2679  2 -      8737 -c----a------------------------------------------
i Saguinus_inustus.k141_3945547                          I 2 C 0
s Saguinus_labiatus.k141_4004060                              2280  2 +      2343 -c----a------------------------------------------
i Saguinus_labiatus.k141_4004060                         I 2 C 0
s Saguinus_midas.LG03                                    209476693  2 + 209938924 -c----a------------------------------------------
i Saguinus_midas.LG03                                    I 2 C 0
s Saguinus_mystax.k141_4699220                                1491  2 -      7576 -c----a------------------------------------------
i Saguinus_mystax.k141_4699220                           I 2 C 0
s Saimiri_boliviensis.NW_024100920.1                     119952730  8 - 121099817 ac----ac----------a-------c----------ac----------
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       25066  8 +     46362 AC----AC----------A-------C----------AC----------
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               25163  8 +     45824 AC----AC----------A-------C----------AC----------
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             41829  8 -     64574 AC----AC----------A-------C----------AC----------
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4910  1 -     23631 --------------------------------------C----------
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 25057  8 -     61129 AC----AC----------A-------C----------AC----------
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5422421  8 -   5703754 ac----ac----------a-------c----------ac----------
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          57660  8 -     80660 AC----AC----------A-------C----------AC----------
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Semnopithecus_entellus.k141_1672505                         5522 12 -     12572 AA----AC----------A-------C----------ATACA------A
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      32375 12 +     39453 AA----AC----------A-------C----------ATACA------A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           12879 12 +     27826 AA----AC----------A-------C----------ATACA------A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            12425 12 -     19483 AA----AC----------A-------C----------ATACA------A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      5721 12 -     12762 AA----AC----------A-------C----------ATACA------A
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           5564 12 +     13763 AA----AC----------A-------C----------ATACA------A
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Theropithecus_gelada.CM009954.1                        186434047  9 + 186847797 -------c----------a-------c----------acaca------a
i Theropithecus_gelada.CM009954.1                        I 16 C 0
s Trachypithecus_auratus.k141_722599                         16461 12 -     20410 AA----AC----------A-------C----------ATACA------A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      5581 12 -     12674 AA----AC----------A-------C----------ATACA------A
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       16569 12 +     19930 AA----AC----------A-------C----------ATACA------A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      12969 12 -     19997 AA----AC----------A-------C----------ATACA------A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            53112 12 -     60166 AA----AC----------A-------C----------ATACA------A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        20575 12 -     27529 AA----AC----------A-------C----------ATACA------A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                       2203 12 +      9229 AA----AC----------A-------C----------ATACA------A
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          14102 12 -     21137 AA----AC----------A-------C----------ATACA------A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                    2207 12 +      9131 AA----TC----------A-------C----------ATACA------A
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                         2166 12 -      3730 AA----AC----------A-------C----------ATACA------A
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        30435 12 +     32220 AA----AC----------A-------C----------ATACA------A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5944533 12 +   6242583 AA----AC----------A-------C----------ATACA------A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       13790 12 +     20839 AA----AC----------A-------C----------ATACA------A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
e Cheracebus_torquatus.k141_1170026                          64344 81 +     76511 I
e Cheracebus_regulus.k141_471822                            159875 81 -    216457 I
e Cheracebus_lugens.k141_1393925                              2308 81 +     17877 I
e Cheracebus_lucifer.k141_49986                               2432 81 -     17098 I
e Plecturocebus_moloch.k141_1031110                          25240 158 -     89403 I
e Plecturocebus_miltoni.k141_349282                          27867 148 +     90634 I
e Plecturocebus_hoffmannsi.k141_3303950                      32394 156 +     67232 I
e Plecturocebus_grovesi.k141_2013005                         32198 160 +     60166 I
e Plecturocebus_dubius.k141_1058799                          25236 146 -     87928 I
e Plecturocebus_cupreus.k141_2351393                         11453 152 +     39403 I
e Plecturocebus_cinerascens.k141_1164729                     25783 136 +     88961 I
e Plecturocebus_caligatus.k141_1382851                       24956 158 +     87950 I
e Plecturocebus_brunneus.k141_1495506                        20694 156 +     34906 I
e Plecturocebus_bernhardi.k141_2549090                       11531 156 -     39866 I
e Echinops_telfairi.JH980293.1                            48781896  0 + 111700974 C
e Otolemur_garnettii.GL873799.1                             699608  7 -   1103335 I
e Otolemur_crassicaudatus.k141_222918                         7369  7 +      8798 I
e Galago_senegalensis.k141_631886                             7575  7 +     11339 I
e Galago_moholi.ctg2040                                     429881  7 -    453645 I
e Cebus_unicolor.k141_1837183                                 2127  0 +     14051 C
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Aotus_nancymaae.KZ198451.1                               4300007  0 -   5030052 C
e Alouatta_puruensis.k141_362188                              4589  3 +      5663 I
e Alouatta_discolor.k141_566626                              15343  0 +     28687 C
e Alouatta_belzebul.k141_3560514                             11780  0 +     51355 C
e Mus_pahari.LT608297.1                                   31359383 11 -  89631738 I
e Mus_spretus.CM004101.1                                  90757467 11 - 130317789 I
e Mus_musculus.chr8                                       87654680 11 - 129401213 I
e Mus_caroli.LT608237.1                                   84365276 11 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1494  0 +      4343 C
e Loris_tardigradus.ctg83                                  1015593  7 +   6120653 I
e Loris_lydekkerianus.k141_399337                            17882  7 -     33856 I
e Perodicticus_potto.k141_1186926                              740  7 +     10374 I
e Perodicticus_ibeanus.k141_1182643                            362  7 -      3244 I
e Ziphius_cavirostris.ZipCav_flattened_line_1424488            316  0 -       542 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      17784 11 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Xerus_inauris.XerIna_scaffold_2302                          4485 13 +    224448 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 14543  0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5374276 47 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4853040  0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   57781  0 -     77625 C
e Tursiops_truncatus.MRVK01000835.1                       15741683  0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_394                       3042  0 +     70247 C
e Tupaia_chinensis.KB320699.1                              2166677  0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4294973  0 +  10818551 C
e Tragulus_javanicus.TraJav_scaffold_40725                    3973  0 +     27266 C
e Tonatia_saurophila.TonSau_scaffold_294                     83346 714 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_85600                    5751  1 +     18632 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              108121  7 +    114563 I
e Tarsius_wallacei.k141_254427                                4205  0 -     16117 C
e Tarsius_lariang.k141_2201908                               29405  0 +     70052 C
e Tapirus_terrestris.TapTer_scaffold_755                    390789  0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      122308  0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                14780  0 +     41958 C
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6815048  0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629              21944  0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             33381  0 +     97271 C
e Spermophilus_dauricus.KZ294078.1                         1957430 24 -   3870691 I
e Sorex_araneus.JH798187.1                                13653314 9235 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               5231  0 +   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_42075                     4516 20 -     30804 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    156307 109 -    313613 I
e Saiga_tatarica.SaiTat_scaffold_133311                       2552  0 +      9503 C
e Rousettus_aegyptiacus.RouAeg_scaffold_121563                 362  0 +      1157 C
e Rhinolophus_sinicus.LVEH01000134.1                        370286  0 -   3329780 C
e Rattus_norvegicus.chr16                                 53574703 11 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                 10094  0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20277699  0 -  38429054 C
e Pteropus_vampyrus.KN525825.1                             1371089  0 +   4952924 C
e Pteropus_alecto.KB030862.1                              22987529  0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_76658          1314  0 -      3818 C
e Pteronotus_parnellii.KE909381.1                            18135  0 -     21811 C
e Psammomys_obesus.NESX01036370.1                            15300 11 -     21651 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15806  0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_173610           2038  0 +      7680 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             6027  0 +     22620 C
e Phocoena_phocoena.PhoPho_flattened_line_24159              12502  0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_221660                     1293 296 -      2102 I
e Peromyscus_maniculatus.KI615324.1                       18215268 11 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15890  0 -     78924 C
e Pantholops_hodgsonii.KE114653.1                          1269975  0 -   2937107 C
e Panthera_tigris.KE722367.1                               4724629  0 -   8748460 C
e Panthera_pardus.KV860321.1                                267809  0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  154493  0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      179245  0 -    191736 C
e Ovis_aries.CM001607.2                                   17591086  7 +  44047080 I
e Otocyon_megalotis.JAEUCK010005147.1                       466427  0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                       107181400  0 - 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12287  0 -     18566 C
e Orcinus_orca.KB316932.1                                  2785431  0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    84561 11 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_7387                      632 3336 +    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          82646  0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         148258  0 +    630418 C
e Odobenus_rosmarus.KB229312.1                              509079  0 -   2017862 C
e Octodon_degus.JH651603.1                                  750513 17 +  11899542 I
e Ochotona_princeps.JH802162.1                             1368274 11 +   3988456 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105772019  7 + 199412804 I
e Nycticebus_coucang.k141_1514628                             1564  7 -      5837 I
e Nycticebus_bengalensis.LG01                            102596097  7 - 196305487 I
e Nyctereutes_procyonoides.CAJHUB010000658.1               9153002  0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    760809  0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5869540  0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20310254  0 +  31847680 C
e Nannospalax_galili.KL204047.1                            2040230  7 -   3037898 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_44643                         2703  0 +     25416 C
e Myotis_lucifugus.GL429869.1                              3908151  0 -   4330536 C
e Myotis_davidii.KB100139.1                                1592051  0 -   6019432 C
e Myotis_brandtii.KE162005.1                                284733  0 -  10118263 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     73869  7 -     80779 I
e Mustela_putorius.JH418006.1                               304457  0 -  14710649 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              9258 14 +     14296 I
e Murina_feae.MurFea_scaffold_85699                          11248  0 +     14753 C
e Mungos_mungo.MunMun_flattened_line_40893                     677  0 +      5729 C
e Moschus_moschiferus.MosMos_scaffold_13123                   4882  0 +     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 144583  0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    30575  0 -    437263 C
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_55178          483  0 +     26817 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             37669  0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1853991  0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                18000 920 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24609  0 -    145209 C
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    6827  0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12184766 1004 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 37694 11 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365             12959  0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                        16692  0 -    207569 C
e Marmota_marmota.CZRN01000018.1                          33106629 24 -  40650429 I
e Manis_pentadactyla.KN006162.1                              54034 31 -    317179 I
e Manis_javanica.JSZB01003497.1                              21892 31 +    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                  6119  0 +    270270 C
e Lycaon_pictus.CM007581.1                                17959085  0 -  59628241 C
e Loxodonta_africana.GL010049.1                            4219685  0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             271669  0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     5119  0 +     14121 I
e Leptonychotes_weddellii.KB714746.1                       3059314  0 +   3914936 C
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Lasiurus_borealis.LasBor_scaffold_32767                    20890  0 -     42476 C
e Kogia_breviceps.KogBre_flattened_line_81059                 2137  0 -     18011 C
e Jaculus_jaculus.JH725527.1                               8279032 12 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_34779                2398  0 -     31341 C
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7525557 13 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      85523  7 +    135385 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            27359  7 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  48617  8 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_101188               2406  0 +      9903 C
e Hipposideros_armiger.JXIK01000431.1                       113840  0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               114036  0 +    128679 C
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3353  0 +      7595 C
e Heterocephalus_glaber.JH602082.1                        20664195 469 +  22651954 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 23295  0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               245670  0 +    327341 C
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Graphiurus_murinus.GraMur_scaffold_10447                   37413 14 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            35790 14 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     612700  0 -    660261 C
e Galeopterus_variegatus.GalVar_scaffold_108840               6188  0 -      9135 C
e Galagoides_demidoff.k141_1711393                            4830  7 +     41679 I
e Fukomys_damarensis.KN121974.1                             853051  7 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                 12971  0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20199310  0 + 205367284 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Eubalaena_japonica.EubJap_flattened_line_31514             28560  0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           14614  0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               36967  0 +    498745 C
e Equus_caballus.CM000403.2                               18534938  0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1287130  0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2151465  0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16339377  0 -  41312741 C
e Ellobius_talpinus.LOJH01081419.1                            5041 11 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          25111 11 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       315458  0 +    607251 C
e Eidolon_helvum.KE797349.1                                   1082  0 -     31197 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 35946 23 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    43755 17 +     67921 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    9596  0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  676836  0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8632254 708 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16815191  0 +  35494412 C
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            70652  1 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_15900             3241  7 -     75252 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  38612  7 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    839213  0 +   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129             31859  0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_37019               7004  0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11669751 11 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 54228 11 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           4168  0 +     23735 C
e Condylura_cristata.JH655891.1                           17552956  0 -  53390261 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1260426 17 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            7648  1 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           6017  0 -     25243 C
e Cephalopachus_bancanus.k141_1423433                         8712  0 +     31688 C
e Cavia_tschudii.CavTsc_scaffold_8919                       103394 23 +    143979 I
e Cavia_porcellus.DS562891.1                              18364512 23 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18352252 23 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     97449  0 +    217609 C
e Castor_canadensis.CasCan_scaffold_2074                    140386 13 +    179628 I
e Carollia_perspicillata.CarPer_scaffold_92756                7250 707 -     11696 I
e Carlito_syrichta.NW_007259797.1                           158908  0 -    496798 C
e Capromys_pilorides.CapPil_scaffold_65020                    3692  7 -     12242 I
e Capra_hircus.CM004588.1                                 18065802  0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18835001  0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18504142  0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17962845  0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9038369  0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     3674  0 -     43241 C
e CanFam4.chr16                                           17802928  0 -  60362399 C
e Camelus_ferus.KB017975.1                                  405530 47 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2337232 47 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10004760 47 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2824516  0 +   4408762 C
e Bos_taurus.CM000203.6                                   18088566  0 +  45695690 C
e Bos_mutus.JH880303.1                                     1130482  0 -   1948126 C
e Bos_indicus.CM003047.1                                  20277928  0 +  48749331 C
e Bison_bison.KN261452.1                                    204691  0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    32056  0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         5781  0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15195316  0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6909 705 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         681  7 +      5281 I
e Aplodontia_rufa.AprRuf_scaffold_68852                      15968 13 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_43303              2243  0 -     32520 C
e Anoura_caudifer.AnoCau_scaffold_1412                      187499 706 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          680976  0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     76281 30 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             82164  0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9513259  0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     74750 11 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           835307  0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                      11928 6 +     62944 CCCAC--A
s Allenopithecus_nigroviridis.k141_3361533                   20172 6 -     52922 GCCAC--A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         20094 6 -     28001 GCCAC--A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                         10587 6 -     18505 GCCAC--A
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                          11459 6 -     12518 GCCAC--A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             11780 5 +     51355 -ACAC--A
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                4891 5 -     36483 -ACAC--A
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              15343 1 +     28687 -------A
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 3830 1 +     27940 -------A
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            4900 5 -      9457 -ACAC--A
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             3858 5 +     30492 -ACAC--A
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              8079 5 +     47717 -ACAC--A
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              4592 5 +      5663 -ACAC--A
i Alouatta_puruensis.k141_362188                         I 3 C 0
s Alouatta_seniculus.k141_117119                             19049 5 +     50774 -ACAC--A
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Aotus_azarae.k141_3104676                                  17591 2 -     33861 ----t--g
i Aotus_azarae.k141_3104676                              I 6 I 57
s Aotus_griseimembra.k141_2240599                            17585 2 -     34016 ----c--g
i Aotus_griseimembra.k141_2240599                        C 0 I 54
s Aotus_nancymaae.KZ198451.1                               4300007 1 -   5030052 -------g
i Aotus_nancymaae.KZ198451.1                             C 0 I 56
s Aotus_trivirgatus.k141_2152450                             17619 2 -     34685 ----t--g
i Aotus_trivirgatus.k141_2152450                         C 0 I 58
s Aotus_vociferans.k141_344750                               30743 2 -     47192 ----T--G
i Aotus_vociferans.k141_344750                           C 0 I 55
s Ateles_geoffroyi_b.tarseq_1536                             21212284 5 -  21539123 -ACAC--A
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               47071 5 -     48001 -ACAC--A
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 29876 5 -     30947 -ACAC--A
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               11657 5 -     89868 -ACAC--A
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              16045 5 -     40414 -ACAC--A
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                23919 5 +     72325 -ACAC--A
i Ateles_paniscus.k141_457735                            C 0 C 0
s Cacajao_ayresi.k141_552049                                104933 6 -    122966 cacac--a
i Cacajao_ayresi.k141_552049                             I 11 C 0
s Cacajao_calvus.k141_5142                                   64426 6 +     81800 cacac--a
i Cacajao_calvus.k141_5142                               I 11 C 0
s Cacajao_hosomi.k141_81245                                  33618 6 -     95584 cacac--a
i Cacajao_hosomi.k141_81245                              I 11 C 0
s Cacajao_melanocephalus.k141_619699                         57716 4 -    119600 --CAC--A
i Cacajao_melanocephalus.k141_619699                     I 9 C 0
s Callibella_humilis.k141_10318                               1339 2 +     27907 ----C--A
i Callibella_humilis.k141_10318                          C 0 I 4
s Callimico_goeldii.k141_737284                                989 2 -     31217 ----C--A
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                             1285 2 +      5377 ----C--G
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23593136 2 - 189096842 ----C--A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1962 2 -     12329 ----C--G
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s Cebuella_pygmaea.k141_793006                                 976 2 -     15088 ----C--A
i Cebuella_pygmaea.k141_793006                           C 0 I 8
s Cebus_albifrons.Contig27                                25654462 4 +  26074798 --CAC--g
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                2406 4 +     28840 --cac--g
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 2127 4 +     14051 --CAC--G
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Cercocebus_atys.KQ010504.1                               4481107 6 +   4669795 gccac--a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        5620 6 +     17872 GCCAC--A
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           6208 6 -     14043 GCCAC--A
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          14301 6 +     27781 GCCAC--A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        14456 6 -     20310 GCCAC--A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          17433 6 +     29689 GCCAC--A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           12194 6 -     20078 GCCAC--A
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          20106 6 -     27936 GCCAC--A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            8985 6 -     17152 GCCAC--A
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38828708 6 +  39242232 GCCAC--A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21228223 6 -  21565898 GCCAC--A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       45327 6 -     53127 GCCAC--A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        5582 6 +     13442 GCCAC--A
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       20128 6 -     27947 GCCAC--A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         3154 6 +     10558 GCCAC--A
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          6169 6 +     14005 GCCAC--A
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chiropotes_albinasus.k141_2206961                           3071 6 -     15524 cccac--a
i Chiropotes_albinasus.k141_2206961                      I 9 C 0
s Chiropotes_israelita.k141_747660                          102045 4 +    146308 --CAC--A
i Chiropotes_israelita.k141_747660                       I 2 C 0
s Chiropotes_sagulatus.k141_1421488                          33862 6 -     50570 CACAC--A
i Chiropotes_sagulatus.k141_1421488                      I 12 C 0
s Chlorocebus_aethiops.ctg25                              18434034 6 -  18827391 GCCAC--A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       20529 6 -     50209 GCCAC--A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135427535 6 + 135778131 gccac--a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1916072 6 +   2368649 gccAC--A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199954313 6 + 200372422 GCCAC--A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              42622 6 +     84244 GCCAC--A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Erythrocebus_patas.Contig38                             21210704 6 -  21539334 GCCAC--A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Gorilla_beringei.k141_3596273                              21140 6 -     32273 CCCAC--A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186343256 6 + 186649187 cccac--a
i Gorilla_gorilla.LT578341.1                             I 18 C 0
s Hoolock_leuconedys.ctg274                                    440392 6 +    630532 CCCAC--A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         18104 5 -     38430 -ACAC--A
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                       10146 2 +     64341 ----c--a
i Leontocebus_fuscicollis.k141_1820339                   C 0 I 4
s Leontocebus_illigeri.k141_1304848                           2487 2 -     35062 ----c--a
i Leontocebus_illigeri.k141_1304848                      C 0 I 4
s Leontocebus_nigricollis.k141_4610752                       10328 2 +     35603 ----c--a
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    31384 2 +     38576 ----C--A
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         28088 2 +     66356 ----C--A
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Lophocebus_aterrimus.ctg367                              1442662 6 +   1826925 GCCAC--A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_2326796                              12469 6 +     40492 GCCAC--A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59681716 6 +  60120075 GCCAC--A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 18267 6 -     26193 GCCAC--A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            86042 6 -    114318 GCCAC--A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 11731 6 -     23192 GCCAC--A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                21196 6 -     29190 GCCAC--A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  29781 6 +     37952 GCCAC--A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186844848 6 + 187317192 gccac--a
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25463429 6 -  25927173 gccac--a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  85633 6 +     89720 GCCAC--A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                12645 6 +     20474 GCCAC--A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  12419 6 -     14993 GCCAC--A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  335282 6 -    668171 GCCAC--A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                10706 6 -     24072 GCCAC--A
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               31352 6 -     45290 GCCAC--A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23942937 6 -  24302211 GCCAC--A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               357039 6 +    752769 GCCAC--A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Mico_argentatus.k141_1024458                                 987 2 -     20047 ----C--A
i Mico_argentatus.k141_1024458                           C 0 I 4
s Mico_humeralifer.k141_700707                                  24 2 +      5224 ----C--A
i Mico_humeralifer.k141_700707                           C 0 I 4
s Mico_schneideri.k141_916733                                        987 2 +      5107 ----C--A
i Mico_schneideri.k141_916733                                  C 0 I 4
s Miopithecus_ogouensis.k141_534055                          14607 6 -     28506 GCCAC--A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Nasalis_larvatus.k141_413338                               20681 6 +     21681 GCCAC--A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Pan_paniscus.KQ411613.1                                    49242 6 +     80009 cccac--a
i Pan_paniscus.KQ411613.1                                I 4 C 0
s Pan_troglodytes.KZ622849.1                                 27454 6 +    110857 cccac--a
i Pan_troglodytes.KZ622849.1                             I 27 I 59
s Papio_anubis.CM001495.2                                183448870 8 + 183742232 gcGAACAA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            12384 6 +     20448 GCCAC--A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20569199 6 +  20919399 GCCAC--A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                  11147 6 +     41871 GCCAC--A
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    14425 6 +     27711 GCCAC--A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  5406 6 -     11374 GCCAC--A
i Papio_ursinus.k141_5274964                             C 0 C 0
s Piliocolobus_badius.k141_1142974                            3781 6 +     68526 GCCAC--A
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        43916 6 +     89929 GCCAC--A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            45332 6 +     51399 GCCAC--A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14301568 6 -  14605196 gccac--a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1476471                              7339 6 +     26961 cccac--a
i Pithecia_albicans.k141_1476471                         I 11 C 0
s Pithecia_chrysocephala.k141_839575                          3460 6 +     23417 CCCAC--A
i Pithecia_chrysocephala.k141_839575                     I 11 C 0
s Pithecia_hirsuta.k141_305604                                7323 6 +     29694 cccac--a
i Pithecia_hirsuta.k141_305604                           I 11 C 0
s Pithecia_mittermeieri.k141_446740                          32361 6 +     52772 cccac--a
i Pithecia_mittermeieri.k141_446740                      I 11 C 0
s Pithecia_pissinattii.k141_1824269                           7349 6 +     26198 CCCAC--A
i Pithecia_pissinattii.k141_1824269                      I 11 C 0
s Pithecia_pithecia.tarseq_165                             3943876 6 +   4542175 CCCAC--A
i Pithecia_pithecia.tarseq_165                           I 17 C 0
s Pithecia_vanzolinii.k141_1697688                            7319 6 -     23490 CCCAC--A
i Pithecia_vanzolinii.k141_1697688                       I 11 C 0
s Pongo_abelii.CM009266.2                                189136722 6 + 189387572 cccac--a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9576332 6 +   9816681 CCCAC--A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               78862 6 -     81375 GCCAC--A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                             10698 6 +     19060 GCCAC--A
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Pygathrix_cinerea.k141_1153803                             20675 6 -     91421 GCCAC--A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7614800 6 +   7812017 GCCAC--A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             20705 6 -     72585 GCCAC--A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_1041714                            1268 6 +      5697 GCCAC--A
i Rhinopithecus_bieti.k119_1041714                       C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91241741 6 - 195417433 gCCAC--A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7677390 6 +   7961872 GCCAC--A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_8081                                  3038 3 +     42994 ----c-cg
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_228412                               121 2 +      6556 ----c--a
i Saguinus_imperator.k141_228412                         C 0 C 0
s Saguinus_inustus.k141_3945547                               2681 2 -      8737 ----c--a
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                              2282 2 +      2343 ----c--a
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209476695 2 + 209938924 ----c--a
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                1493 2 -      7576 ----c--a
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119952738 5 - 121099817 -acac--g
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       25074 5 +     46362 -ACAC--G
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               25171 5 +     45824 -ACAC--G
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             41837 5 -     64574 -ACAC--G
i Saimiri_oerstedii.k141_1487881                         C 0 I 7
s Saimiri_sciureus.k141_2278166                               4911 5 -     23631 -ACAC--G
i Saimiri_sciureus.k141_2278166                          C 0 I 7
s Saimiri_ustus.k141_1484609                                 25065 5 -     61129 -ACAC--G
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5422429 5 -   5703754 -ccac--g
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          57668 5 -     80660 -CCAC--G
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Semnopithecus_entellus.k141_1672505                         5534 6 -     12572 GCCAC--A
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      32387 6 +     39453 GCCAC--A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           12891 6 +     27826 GCCAC--A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            12437 6 -     19483 GCCAC--A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      5733 6 -     12762 GCCAC--A
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           5576 6 +     13763 GCCAC--A
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Theropithecus_gelada.CM009954.1                        186434056 6 + 186847797 gccac--a
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_722599                         16473 6 -     20410 GCCAC--A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      5593 6 -     12674 GCCAC--A
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       16581 6 +     19930 GCCAC--A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      12981 6 -     19997 GCCAC--A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            53124 6 -     60166 GCCAC--A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        20587 6 -     27529 GCCAC--A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                       2215 6 +      9229 GCCAC--A
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          14114 6 -     21137 GCCAC--A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                    2219 6 +      9131 GCCAC--A
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                         2178 6 -      3730 GCCAC--A
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        30447 6 +     32220 GCCAC--A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5944545 6 +   6242583 GCCAC--A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       13802 6 +     20839 GCCAC--A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
e Cheracebus_torquatus.k141_1170026                          64344 81 +     76511 I
e Cheracebus_regulus.k141_471822                            159875 81 -    216457 I
e Cheracebus_lugens.k141_1393925                              2308 81 +     17877 I
e Cheracebus_lucifer.k141_49986                               2432 81 -     17098 I
e Plecturocebus_moloch.k141_1031110                          25240 158 -     89403 I
e Plecturocebus_miltoni.k141_349282                          27867 148 +     90634 I
e Plecturocebus_hoffmannsi.k141_3303950                      32394 156 +     67232 I
e Plecturocebus_grovesi.k141_2013005                         32198 160 +     60166 I
e Plecturocebus_dubius.k141_1058799                          25236 146 -     87928 I
e Plecturocebus_cupreus.k141_2351393                         11453 152 +     39403 I
e Plecturocebus_cinerascens.k141_1164729                     25783 136 +     88961 I
e Plecturocebus_caligatus.k141_1382851                       24956 158 +     87950 I
e Plecturocebus_brunneus.k141_1495506                        20694 156 +     34906 I
e Plecturocebus_bernhardi.k141_2549090                       11531 156 -     39866 I
e Echinops_telfairi.JH980293.1                            48781896 0 + 111700974 C
e Otolemur_garnettii.GL873799.1                             699608 7 -   1103335 I
e Otolemur_crassicaudatus.k141_222918                         7369 7 +      8798 I
e Galago_senegalensis.k141_631886                             7575 7 +     11339 I
e Galago_moholi.ctg2040                                     429881 7 -    453645 I
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Mus_pahari.LT608297.1                                   31359383 11 -  89631738 I
e Mus_spretus.CM004101.1                                  90757467 11 - 130317789 I
e Mus_musculus.chr8                                       87654680 11 - 129401213 I
e Mus_caroli.LT608237.1                                   84365276 11 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1494 0 +      4343 C
e Loris_tardigradus.ctg83                                  1015593 7 +   6120653 I
e Loris_lydekkerianus.k141_399337                            17882 7 -     33856 I
e Perodicticus_potto.k141_1186926                              740 7 +     10374 I
e Perodicticus_ibeanus.k141_1182643                            362 7 -      3244 I
e Ziphius_cavirostris.ZipCav_flattened_line_1424488            316 0 -       542 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      17784 11 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Xerus_inauris.XerIna_scaffold_2302                          4485 13 +    224448 I
e Vulpes_lagopus.VulLag_flattened_line_30954                 14543 0 -     43706 C
e Vicugna_pacos.KN270157.1                                 5374276 47 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Ursus_maritimus.KK499267.1                               4853040 0 -   5085361 C
e Uropsilus_gracilis.UroGra_scaffold_12083                   57781 0 -     77625 C
e Tursiops_truncatus.MRVK01000835.1                       15741683 0 +  33153633 C
e Tupaia_tana.TupTan_flattened_line_394                       3042 0 +     70247 C
e Tupaia_chinensis.KB320699.1                              2166677 0 +   4065304 C
e Trichechus_manatus.JH594705.1                            4294973 0 +  10818551 C
e Tragulus_javanicus.TraJav_scaffold_40725                    3973 0 +     27266 C
e Tonatia_saurophila.TonSau_scaffold_294                     83346 714 +    610378 I
e Tolypeutes_matacus.TolMat_scaffold_85600                    5751 1 +     18632 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              108121 7 +    114563 I
e Tarsius_wallacei.k141_254427                                4205 0 -     16117 C
e Tarsius_lariang.k141_2201908                               29405 0 +     70052 C
e Tapirus_terrestris.TapTer_scaffold_755                    390789 0 +    539355 C
e Tapirus_indicus.TapInd_scaffold_9301                      122308 0 -    156842 C
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                14780 0 +     41958 C
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sus_scrofa.CM000828.4                                    6815048 0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629              21944 0 -    196729 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             33381 0 +     97271 C
e Spermophilus_dauricus.KZ294078.1                         1957430 24 -   3870691 I
e Sorex_araneus.JH798187.1                                13653314 9235 -  18376816 I
e Solenodon_paradoxus.SolPar_flattened_line_126               5231 0 +   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_42075                     4516 20 -     30804 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    156307 109 -    313613 I
e Saiga_tatarica.SaiTat_scaffold_133311                       2552 0 +      9503 C
e Rousettus_aegyptiacus.RouAeg_scaffold_121563                 362 0 +      1157 C
e Rhinolophus_sinicus.LVEH01000134.1                        370286 0 -   3329780 C
e Rattus_norvegicus.chr16                                 53574703 11 +  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                 10094 0 +     55207 C
e Puma_concolor.QAVW01001104.1                            20277699 0 -  38429054 C
e Pteropus_vampyrus.KN525825.1                             1371089 0 +   4952924 C
e Pteropus_alecto.KB030862.1                              22987529 0 +  28871421 C
e Pteronura_brasiliensis.PteBra_flattened_line_76658          1314 0 -      3818 C
e Pteronotus_parnellii.KE909381.1                            18135 0 -     21811 C
e Psammomys_obesus.NESX01036370.1                            15300 11 -     21651 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15806 0 -     22811 C
e Platanista_gangetica.PlaMin_flattened_line_173610           2038 0 +      7680 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46187             6027 0 +     22620 C
e Phocoena_phocoena.PhoPho_flattened_line_24159              12502 0 +     63832 C
e Petromus_typicus.PetTyp_scaffold_221660                     1293 296 -      2102 I
e Peromyscus_maniculatus.KI615324.1                       18215268 11 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15890 0 -     78924 C
e Pantholops_hodgsonii.KE114653.1                          1269975 0 -   2937107 C
e Panthera_tigris.KE722367.1                               4724629 0 -   8748460 C
e Panthera_pardus.KV860321.1                                267809 0 +  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                  154493 0 +    230217 C
e Ovis_canadensis.OviCan_scaffold_2572                      179245 0 -    191736 C
e Ovis_aries.CM001607.2                                   17591086 7 +  44047080 I
e Otocyon_megalotis.JAEUCK010005147.1                       466427 0 -    559221 C
e Oryctolagus_cuniculus.CM000791.1                       107181400 0 - 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12287 0 -     18566 C
e Orcinus_orca.KB316932.1                                  2785431 0 -  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2986                    84561 11 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_7387                      632 3336 +    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          82646 0 -    150152 C
e Odocoileus_virginianus.KZ100018.1                         148258 0 +    630418 C
e Odobenus_rosmarus.KB229312.1                              509079 0 -   2017862 C
e Octodon_degus.JH651603.1                                  750513 17 +  11899542 I
e Ochotona_princeps.JH802162.1                             1368274 11 +   3988456 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105772019 7 + 199412804 I
e Nycticebus_coucang.k141_1514628                             1564 7 -      5837 I
e Nycticebus_bengalensis.LG01                            102596097 7 - 196305487 I
e Nyctereutes_procyonoides.CAJHUB010000658.1               9153002 0 -   9404916 C
e Noctilio_leporinus.NocLep_scaffold_251                    760809 0 +    783361 C
e Neophocaena_asiaeorientalis.KZ687982.1                   5869540 0 +   7148211 C
e Neomonachus_schauinslandi.NINY01007730.1                20310254 0 +  31847680 C
e Nannospalax_galili.KL204047.1                            2040230 7 -   3037898 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Myotis_myotis.MyoMyo_scaffold_44643                         2703 0 +     25416 C
e Myotis_lucifugus.GL429869.1                              3908151 0 -   4330536 C
e Myotis_davidii.KB100139.1                                1592051 0 -   6019432 C
e Myotis_brandtii.KE162005.1                                284733 0 -  10118263 C
e Myocastor_coypus.MyoCoy_scaffold_10123                     73869 7 -     80779 I
e Mustela_putorius.JH418006.1                               304457 0 -  14710649 C
e Muscardinus_avellanarius.MusAve_scaffold_82313              9258 14 +     14296 I
e Murina_feae.MurFea_scaffold_85699                          11248 0 +     14753 C
e Mungos_mungo.MunMun_flattened_line_40893                     677 0 +      5729 C
e Moschus_moschiferus.MosMos_scaffold_13123                   4882 0 +     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 144583 0 -    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                    30575 0 -    437263 C
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Mirounga_angustirostris.MirAng_flattened_line_55178          483 0 +     26817 C
e Miniopterus_schreibersii.MinSch_scaffold_18080             37669 0 +     64694 C
e Miniopterus_natalensis.LDJU01000034.1                    1853991 0 +   8254450 C
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_52381                18000 920 -     19307 I
e Microgale_talazaci.MicTal_scaffold_6613                    24609 0 -    145209 C
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesoplodon_bidens.MesBid_scaffold_108144                    6827 0 +     10310 C
e Mesocricetus_auratus.KB708134.1                         12184766 1004 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 37694 11 +    140813 I
e Mellivora_capensis.MelCap_flattened_line_69365             12959 0 +     13704 C
e Megaderma_lyra.MegLyr_scaffold_4542                        16692 0 -    207569 C
e Marmota_marmota.CZRN01000018.1                          33106629 24 -  40650429 I
e Manis_pentadactyla.KN006162.1                              54034 31 -    317179 I
e Manis_javanica.JSZB01003497.1                              21892 31 +    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                  6119 0 +    270270 C
e Lycaon_pictus.CM007581.1                                17959085 0 -  59628241 C
e Loxodonta_africana.GL010049.1                            4219685 0 -  43346337 C
e Lipotes_vexillifer.KE559953.1                             271669 0 -    662738 C
e Lepus_americanus.LepAme_scaffold_107385                     5119 0 +     14121 I
e Leptonychotes_weddellii.KB714746.1                       3059314 0 +   3914936 C
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Lasiurus_borealis.LasBor_scaffold_32767                    20890 0 -     42476 C
e Kogia_breviceps.KogBre_flattened_line_81059                 2137 0 -     18011 C
e Jaculus_jaculus.JH725527.1                               8279032 12 -   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_34779                2398 0 -     31341 C
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7525557 13 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      85523 7 +    135385 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            27359 7 -    143317 I
e Hyaena_hyaena.HyaHya_flattened_line_26932                  48617 8 +     55795 I
e Hipposideros_galeritus.HipGal_scaffold_101188               2406 0 +      9903 C
e Hipposideros_armiger.JXIK01000431.1                       113840 0 +   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_9076               114036 0 +    128679 C
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3353 0 +      7595 C
e Heterocephalus_glaber.JH602082.1                        20664195 469 +  22651954 I
e Hemitragus_hylocrius.HemHyl_scaffold_45859                 23295 0 +     36099 C
e Helogale_parvula.HelPar_flattened_line_2585               245670 0 +    327341 C
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Graphiurus_murinus.GraMur_scaffold_10447                   37413 14 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            35790 14 +     49224 I
e Giraffa_tippelskirchi.LVKQ01S007888.1                     612700 0 -    660261 C
e Galeopterus_variegatus.GalVar_scaffold_108840               6188 0 -      9135 C
e Galagoides_demidoff.k141_1711393                            4830 7 +     41679 I
e Fukomys_damarensis.KN121974.1                             853051 7 +   3816255 I
e Felis_nigripes.FelNig_flattened_line_20823                 12971 0 -     36744 C
e Felis_catus_fca126.CM031415.1                           20199310 0 + 205367284 C
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Eubalaena_japonica.EubJap_flattened_line_31514             28560 0 -     44125 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           14614 0 +    133382 C
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Equus_przewalskii.KK951119.1                               36967 0 +    498745 C
e Equus_caballus.CM000403.2                               18534938 0 -  39960074 C
e Equus_asinus.JREZ01000139.1                              1287130 0 +   4378816 C
e Eptesicus_fuscus.JH977646.1                              2151465 0 -  14770903 C
e Enhydra_lutris.KZ291758.1                               16339377 0 -  41312741 C
e Ellobius_talpinus.LOJH01081419.1                            5041 11 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          25111 11 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Elaphurus_davidianus.JRFZ01104969.1                       315458 0 +    607251 C
e Eidolon_helvum.KE797349.1                                   1082 0 -     31197 C
e Dolichotis_patagonum.DolPat_scaffold_30833                 35946 23 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    43755 17 +     67921 I
e Diceros_bicornis.DicBicMic_scaffold_5955                    9596 0 +    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  676836 0 +   1390856 C
e Desmodus_rotundus.KZ672289.1                             8632254 708 +  20541912 I
e Delphinapterus_leucas.KZ290073.1                        16815191 0 +  35494412 C
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            70652 1 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_15900             3241 7 -     75252 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  38612 7 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    839213 0 +   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129             31859 0 -     87169 C
e Crocidura_indochinensis.CroInd_scaffold_37019               7004 0 -     19598 C
e Cricetulus_griseus.LT883664.1                           11669751 11 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 54228 11 +     63868 I
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           4168 0 +     23735 C
e Condylura_cristata.JH655891.1                           17552956 0 -  53390261 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1260426 17 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            7648 1 -      8501 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_57634           6017 0 -     25243 C
e Cephalopachus_bancanus.k141_1423433                         8712 0 +     31688 C
e Cavia_tschudii.CavTsc_scaffold_8919                       103394 23 +    143979 I
e Cavia_porcellus.DS562891.1                              18364512 23 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18352252 23 -  23392119 I
e Catagonus_wagneri.CatWag_scaffold_2839                     97449 0 +    217609 C
e Castor_canadensis.CasCan_scaffold_2074                    140386 13 +    179628 I
e Carollia_perspicillata.CarPer_scaffold_92756                7250 707 -     11696 I
e Carlito_syrichta.NW_007259797.1                           158908 0 -    496798 C
e Capromys_pilorides.CapPil_scaffold_65020                    3692 7 -     12242 I
e Capra_hircus.CM004588.1                                 18065802 0 -  44709034 C
e Capra_aegagrus.CM003241.1                               18835001 0 +  46296322 C
e Canis_lupus_orion.HG994398.1                            18504142 0 +  63665305 C
e Canis_lupus_familiaris.chr16                            17962845 0 -  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                         9038369 0 -   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_27089                     3674 0 -     43241 C
e CanFam4.chr16                                           17802928 0 -  60362399 C
e Camelus_ferus.KB017975.1                                  405530 47 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2337232 47 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10004760 47 -  17673402 I
e Bubalus_bubalis.KI419123.1                               2824516 0 +   4408762 C
e Bos_taurus.CM000203.6                                   18088566 0 +  45695690 C
e Bos_mutus.JH880303.1                                     1130482 0 -   1948126 C
e Bos_indicus.CM003047.1                                  20277928 0 +  48749331 C
e Bison_bison.KN261452.1                                    204691 0 -    288883 C
e Beatragus_hunteri.BeaHun_scaffold_50177                    32056 0 +     34529 C
e Balaenoptera_bonaerensis.DF707048.1                         5781 0 -     18090 C
e Balaenoptera_acutorostrata.KI537508.1                   15195316 0 +  23207421 C
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                  6909 705 +     43469 I
e Arctocebus_calabarensis.k141_1648548                         681 7 +      5281 I
e Aplodontia_rufa.AprRuf_scaffold_68852                      15968 13 +     20879 I
e Antilocapra_americana.AntAmePen_scaffold_43303              2243 0 -     32520 C
e Anoura_caudifer.AnoCau_scaffold_1412                      187499 706 +    412891 I
e Ammotragus_lervia.NIVO01071767.1                          680976 0 -   2318259 C
e Allactaga_bullata.AllBul_scaffold_9566                     76281 30 -     89534 I
e Ailurus_fulgens.LNAC01001112.1                             82164 0 -    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                    9513259 0 -  29979442 C
e Acomys_cahirinus.AcoCah_scaffold_12655                     74750 11 +     87051 I
e Acinonyx_jubatus.LLWD01001279.1                           835307 0 -   1699592 C

a score=0.000000
s hg38.chrUn_KI270753v1                                      11934 14 +     62944 TCATA--CA--C------A--------------TAT--AA
s Acinonyx_jubatus.LLWD01001279.1                           835307  8 -   1699592 ----a--ta--t------a--------------ca---a-
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9513259  8 -  29979442 ----a--tg--t------a--------------ta---a-
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             82164  8 -    347723 ----a--tg--t------a--------------ta---a-
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   20178 14 -     52922 TCATA--CA--A------A--------------TAT--AA
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         20100 14 -     28001 TCATA--CA--A------A--------------TAT--AA
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                         10593 14 -     18505 TCATA--CA--A------A--------------TAT--AA
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                          11465 14 -     12518 TCATA--CA--A------A--------------TAT--AA
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             11785 14 +     51355 TCATA--CA--T------A--------------TAC--AA
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                4896 14 -     36483 TCATA--CA--C------A--------------TAC--AA
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              15344 14 +     28687 TCATA--CA--C------A--------------TAC--AA
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 3831 14 +     27940 tcata--ca--c------a--------------tac--aa
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            4905 14 -      9457 TCATA--CA--C------A--------------TAC--AA
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             3863 14 +     30492 TCATA--CA--C------A--------------TAC--AA
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              8084 14 +     47717 TCATA--CA--C------A--------------TAC--AA
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              4597 14 +      5663 tcata--ca--c------a--------------tac--aa
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             19054 14 +     50774 tcata--ca--c------a--------------tac--aa
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          680976  8 -   2318259 ----a--ca--g------g--------------ta---a-
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      188205  2 +    412891 ----------------------------------T---A-
i Anoura_caudifer.AnoCau_scaffold_1412                   I 706 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303              2243  8 -     32520 ----a--ca--g------g--------------ta---a-
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 C 0
s Aotus_azarae.k141_3104676                                  17650 14 -     33861 tcata--ca--c------a--------------tac--aA
i Aotus_azarae.k141_3104676                              I 57 C 0
s Aotus_griseimembra.k141_2240599                            17641 14 -     34016 TCATA--CA--C------A--------------TAC--AA
i Aotus_griseimembra.k141_2240599                        I 54 C 0
s Aotus_nancymaae.KZ198451.1                               4300064 14 -   5030052 TCATA--CA--C------A--------------tac--aa
i Aotus_nancymaae.KZ198451.1                             I 56 C 0
s Aotus_trivirgatus.k141_2152450                             17679 14 -     34685 TCATA--CA--C------A--------------CAC--AA
i Aotus_trivirgatus.k141_2152450                         I 58 C 0
s Aotus_vociferans.k141_344750                               30800 14 -     47192 TCATA--CA--C------A--------------CAC--AA
i Aotus_vociferans.k141_344750                           I 55 C 0
s Arctocebus_calabarensis.k141_1648548                         688 18 +      5281 --ATA--TA--TAAAAATA--------------TAT--AT
i Arctocebus_calabarensis.k141_1648548                   I 7 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  7614  2 +     43469 ----------------------------------T---A-
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 705 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21212289 14 -  21539123 tcata--ca--c------a--------------tac--aa
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               47076 14 -     48001 tcata--ca--c------a--------------tac--aa
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 29881 14 -     30947 tcata--ca--c------a--------------tac--aa
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               11662 14 -     89868 tcata--ca--c------a--------------tac--aa
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              16050 14 -     40414 tcata--ca--c------a--------------tac--aa
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                23924 13 +     72325 tcata---a--c------a--------------tac--aa
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15195316  8 +  23207421 ----a--tg--c------a--------------ta---a-
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         5781  8 -     18090 ----a--tg--c------a--------------ta---a-
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    32056  8 +     34529 ----g--ca--g------g--------------ta---a-
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    204691  8 -    288883 ----a--ca--g------g--------------ta---a-
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20277928  8 +  48749331 ----a--ca--g------g--------------ta---a-
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1130482  8 -   1948126 ----a--ca--g------g--------------ta---a-
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18088566  8 +  45695690 ----a--ca--g------g--------------ta---a-
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2824516  8 +   4408762 ----a--ca--g------g--------------ta---a-
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                104939 14 -    122966 ccata--ca--c------a--------------tac--aa
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   64432 14 +     81800 ccata--ca--c------a--------------tac--aa
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  33624 14 -     95584 ccata--ca--c------a--------------tac--aa
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         57720 14 -    119600 Ccata--ca--c------a--------------tac--aa
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_10318                               1345 14 +     27907 TCATA--CA--C------A--------------TAC--AA
i Callibella_humilis.k141_10318                          I 4 C 0
s Callimico_goeldii.k141_737284                                991 14 -     31217 TCATA--CA--C------A--------------TAC--AA
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                             1287 14 +      5377 TCATA--CA--C------A--------------TAC--AA
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23593138 14 - 189096842 TCATA--CA--C------A--------------TAC--AA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1964 14 -     12329 TCATA--CA--C------A--------------TAC--AA
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s CanFam4.chr16                                           17802928  8 -  60362399 ----a--ta--t------a--------------ta---a-
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     3674  8 -     43241 ----a--ta--t------a--------------ta---a-
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9038369  8 -   9314153 ----a--ta--t------a--------------ta---a-
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17962845  8 -  59632846 ----a--ta--t------a--------------ta---a-
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18504142  8 +  63665305 ----a--ta--t------a--------------ta---a-
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18835001  8 +  46296322 ----a--ca--g------g--------------ta---a-
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18065802  8 -  44709034 ----a--ca--g------g--------------ta---a-
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           158908 14 -    496798 --tta--tg--t------a--------------tataaat
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                7957  2 -     11696 ----------------------------------G---A-
i Carollia_perspicillata.CarPer_scaffold_92756           I 707 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     97449  8 +    217609 ----a--tg--t------a--------------ta---a-
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_pygmaea.k141_793006                                 986 14 -     15088 TCATG--CA--C------A--------------TAC--AA
i Cebuella_pygmaea.k141_793006                           I 8 C 0
s Cebus_albifrons.Contig27                                25654466 14 +  26074798 tcgta--ca--c------a--------------tac--aa
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                2410 14 +     28840 tcgtA--CA--C------A--------------TAC--AA
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 2131 14 +     14051 TCGTA--CA--C------A--------------TAC--AA
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         8712 14 +     31688 --tta--ta--t------a--------------tataaat
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12234994  8 +  27778364 ----a--ta--t------g--------------ta---a-
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           6017  8 -     25243 ----a--ta--t------g--------------ta---a-
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4481113 14 +   4669795 TCATA--CA--A------A--------------TAT--AA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        5626 14 +     17872 TCATA--CA--A------A--------------TAT--AA
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           6214 14 -     14043 TCATA--CA--A------A--------------TAT--AA
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          14307 14 +     27781 TCATA--CA--A------A--------------TAT--AA
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        14462 14 -     20310 TCATA--CA--A------A--------------TAT--AA
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          17439 14 +     29689 TCATA--CA--A------A--------------TAT--AA
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           12200 14 -     20078 TCATA--CA--A------A--------------TAT--AA
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          20112 14 -     27936 TCATA--CA--A------A--------------TAT--AA
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            8991 14 -     17152 TCATA--CA--A------A--------------TAT--AA
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38828714 14 +  39242232 TCATA--CA--a------a--------------tat--aa
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21228229 14 -  21565898 TCATA--CA--A------A--------------TAT--AA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       45333 14 -     53127 TCATA--CA--A------A--------------TAT--AA
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        5588 14 +     13442 TCATA--CA--A------A--------------TAT--AA
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       20134 14 -     27947 TCATA--CA--A------A--------------TTT--AA
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         3160 14 +     10558 TCATA--CA--A------A--------------TAT--AA
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          6175 14 +     14005 TCATA--CA--A------A--------------TGT--AA
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chiropotes_albinasus.k141_2206961                           3077 13 -     15524 tcata--ca--c------a--------------tac---a
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chiropotes_israelita.k141_747660                          102049 14 +    146308 Ccata--ca--c------a--------------tac--ga
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          33868 14 -     50570 Ccata--ca--c------a--------------tac--ga
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18434040 14 -  18827391 TCACA--CA--A------A--------------TAT--AA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       20535 14 -     50209 TCACA--CA--A------A--------------TAT--AA
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135427541 14 + 135778131 TCACA--CA--A------A--------------TAT--AA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1916078 14 +   2368649 TCATA--CA--A------A--------------TAT--GA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199954319 14 + 200372422 TCATA--CA--A------A--------------CAT--GA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              42628 14 +     84244 TCATA--CA--A------A--------------CAT--GA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17552956  8 -  53390261 ----a--ta--t------a--------------ta---g-
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           4168 10 +     23735 ----ataTA--T------A--------------TA---T-
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 I 18
s Crocidura_indochinensis.CroInd_scaffold_37019               7004  8 -     19598 ----A--CA--G------A--------------GA---A-
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             31859  8 -     87169 ----a--tg--t------a--------------ca---a-
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16815191  8 +  35494412 ----a--ta--c------a--------------ta---a-
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8632962  2 +  20541912 ----------------------------------T---A-
i Desmodus_rotundus.KZ672289.1                           I 708 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  676836  8 +   1390856 ----a--ta--t------g--------------ta---a-
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    9596  8 +    198055 ----a--ta--t------g--------------ta---a-
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.KE797349.1                                   1082  4 -     31197 ------------------a--------------ta---a-
i Eidolon_helvum.KE797349.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       315458  8 +    607251 ----a--ca--g------g--------------ta---a-
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Enhydra_lutris.KZ291758.1                               16339377  8 -  41312741 ----a--tg--t------a--------------ta---a-
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2151465  8 -  14770903 ----T--TG--T------A--------------TA---A-
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1287130  8 +   4378816 ----t--ta--t------a--------------ta---a-
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18534938  8 -  39960074 ----t--ta--t------a--------------ta---a-
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               36967  8 +    498745 ----t--ta--t------a--------------ta---a-
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21210710 14 -  21539334 TCATA--CA--A------A--------------TAT--AA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           14614  8 +    133382 ----a--ta--c------a--------------ta---a-
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             28560  8 -     44125 ----a--ta--c------a--------------ta---a-
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20240439  8 + 206538554 ----a--ta--t------a--------------ca---a-
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20199310  8 + 205367284 ----a--ta--t------a--------------ca---a-
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 12971  8 -     36744 ----a--ta--t------a--------------ca---a-
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Galago_moholi.ctg2040                                     429888 17 -    453645 --ATA--TA--TAAAAA-A--------------TAT--AT
i Galago_moholi.ctg2040                                  I 7 C 0
s Galago_senegalensis.k141_631886                             7582 17 +     11339 --ATA--TA--TAAAAA-A--------------TAT--AT
i Galago_senegalensis.k141_631886                        I 7 C 0
s Galagoides_demidoff.k141_1711393                            4837 17 +     41679 --ATA--TA--TAAAAA-G--------------TAT--AT
i Galagoides_demidoff.k141_1711393                       I 7 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               6188 12 -      9135 --ata--ta--t------a--------------tat--at
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     612700  8 -    660261 ----g--ca--g------g--------------ta---a-
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Gorilla_beringei.k141_3596273                              21146 14 -     32273 TCATA--CA--C------A--------------TAT--AA
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186343262 14 + 186649187 tcatA--CA--C------A--------------TAT--AA
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               245670  8 +    327341 ----a--ta--t------a--------------ca---a-
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 23295  8 +     36099 ----a--ca--g------g--------------ta---a-
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               114036  8 +    128679 ----a--ta--c------a--------------ta---a-
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       113840 24 +   1711038 ----ataca--c------agacacacacacacaca---c-
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188               2406 10 +      9903 ----ataca--c------a--------------ca---c-
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  48625  4 +     55795 ------------------A--------------GA---A-
i Hyaena_hyaena.HyaHya_flattened_line_26932              I 8 C 0
s Hoolock_leuconedys.ctg274                                    440398  7 +    630532 TCATC--CA-------------------------------
i Hoolock_leuconedys.ctg274                                 C 0 I 5
s Inia_geoffrensis.IniGeo_flattened_line_34779                2398  8 -     31341 ----a--ta--c------a--------------ta---a-
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                 2137  8 -     18011 ----a--ta--c------a--------------ta---a-
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         18109 14 -     38430 tcata--ca--c------a--------------tac--ag
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    20890  8 -     42476 ----t--TG--T------A--------------TA---A-
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                       10152  6 +     64341 ------------------a--------------tac--aA
i Leontocebus_fuscicollis.k141_1820339                   I 4 I 1
s Leontocebus_illigeri.k141_1304848                           2493  6 -     35062 ------------------a--------------tac--aa
i Leontocebus_illigeri.k141_1304848                      I 4 I 1
s Leontocebus_nigricollis.k141_4610752                       10330 15 +     35603 tcata--ca--c------a--------------taca-aa
i Leontocebus_nigricollis.k141_4610752                   C 0 I 1
s Leontopithecus_chrysomelas.k141_1519602                    31386 14 +     38576 TCATA--CA--C------A--------------TAC--AA
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         28090 14 +     66356 TCATA--CA--C------A--------------TAC--AA
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3059314  8 +   3914936 ----a--tg--t------a--------------ta---a-
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             271669  8 -    662738 ----a--ta--c------a--------------ta---a-
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1442668 14 +   1826925 TCATA--CA--A------A--------------TAT--AA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_399337                            17889 19 -     33856 --ATA-ATA--TAAAAAAA--------------TAT--GT
i Loris_lydekkerianus.k141_399337                        I 7 C 0
s Loris_tardigradus.ctg83                                  1015600 19 +   6120653 --ATA-ATA--TAAAAAAA--------------TAT--GT
i Loris_tardigradus.ctg83                                I 7 C 0
s Lycaon_pictus.CM007581.1                                17959085  8 -  59628241 ----a--ta--t------a--------------ta---a-
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                              12475 14 +     40492 TCATA--CA--A------A--------------TAT--AA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59681722 14 +  60120075 TCATA--CA--a------a--------------tat--aa
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 18273 14 -     26193 TCATA--CA--A------A--------------TAT--AA
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            86048 14 -    114318 TCATA--CA--A------A--------------TAT--AA
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 11737 14 -     23192 TCATA--CA--A------A--------------TAT--AA
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                21202 14 -     29190 TCATA--CA--A------A--------------TAT--AA
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  29787 14 +     37952 TCATA--CA--A------A--------------TAT--AA
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186844854 14 + 187317192 TCATA--CA--A------A--------------TAT--AA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25463435 14 -  25927173 TCATA--CA--A------A--------------TAT--AA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  85639 14 +     89720 TCATA--CA--A------A--------------TAT--AA
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                12651 14 +     20474 TCATA--CA--A------A--------------TAT--AA
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  12425 14 -     14993 TCATA--CA--A------A--------------TAT--AA
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  335288 14 -    668171 TCATA--CA--A------A--------------TAT--AA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                10712 14 -     24072 TCATA--CA--A------A--------------TAT--AA
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               31358 14 -     45290 TCATA--CA--A------A--------------TAT--AA
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                  6119  4 +    270270 ------------------a--------------ta---a-
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23942943 14 -  24302211 TCATA--CA--A------A--------------TAT--AA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               357045 14 +    752769 TCATA--CA--A------A--------------TAT--AA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        16692 10 -    207569 ----AGATA--G------A--------------TA---A-
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 35
s Mellivora_capensis.MelCap_flattened_line_69365             12959  8 +     13704 ----a--tg--t------a--------------ta---a-
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    6827  8 +     10310 ----a--ta--c------a--------------ta---a-
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Mico_argentatus.k141_1024458                                 993 14 -     20047 TCATA--CA--C------A--------------TAC--AA
i Mico_argentatus.k141_1024458                           I 4 C 0
s Mico_humeralifer.k141_700707                                  30 14 +      5224 TCATA--CA--C------A--------------TAC--AA
i Mico_humeralifer.k141_700707                           I 4 C 0
s Mico_schneideri.k141_916733                                        993 14 +      5107 TCATA--CA--C------A--------------TAC--AA
i Mico_schneideri.k141_916733                                  I 4 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                18920  2 -     19307 ----------------------------------T---A-
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 920 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1853991  8 +   8254450 ----g--tg--t------a--------------ta---a-
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             37669  8 +     64694 ----g--tg--t------a--------------ta---a-
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                          14613 14 -     28506 TCATA--CA--A------A--------------TAT--AA
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_55178          483  8 +     26817 ----a--tg--t------a--------------ta---a-
i Mirounga_angustirostris.MirAng_flattened_line_55178    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    30575  8 -    437263 ----a--ta--c------a--------------ta---a-
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 144583  8 -    366855 ----a--ta--t------g--------------ta---a-
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   4882  8 +     82753 ----a--ca--g------g--------------ta---a-
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_40893                     677  8 +      5729 ----a--tc--t------a--------------ca---a-
i Mungos_mungo.MunMun_flattened_line_40893               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                          11248  8 +     14753 ----t--TG--T------A--------------TA---A-
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mustela_putorius.JH418006.1                               304457  8 -  14710649 ----a--tg--t------a--------------ta---a-
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                                284733  8 -  10118263 ----T--TG--T------A--------------TA---A-
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1592051  8 -   6019432 ----T--TG--T------A--------------TA---A-
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3908151  8 -   4330536 ----t--tg--t------a--------------ta---a-
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_44643                         2703  8 +     25416 ----t--TG--T------A--------------CA---A-
i Myotis_myotis.MyoMyo_scaffold_44643                    C 0 C 0
s Nasalis_larvatus.k141_413338                               20687 14 +     21681 TCATA--CA--A------A--------------TAT--TA
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20310254  8 +  31847680 ----a--tg--t------a--------------ta---a-
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5869540  8 +   7148211 ----a--ta--c------a--------------ta---a-
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    760809  8 +    783361 ----a--tg--t------g--------------ca---a-
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9153002  8 -   9404916 ----a--ta--t------a--------------ta---a-
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102596104 19 - 196305487 --ATA-ATA--TAAAAAAA--------------TAT--GT
i Nycticebus_bengalensis.LG01                            I 7 C 0
s Nycticebus_coucang.k141_1514628                             1571 19 -      5837 --ATA-ATA--TAAAAAAA--------------TAT--GT
i Nycticebus_coucang.k141_1514628                        I 7 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105772026 19 + 199412804 --ATA-ATA--TAAAAAAA--------------TAT--GT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 7 C 0
s Odobenus_rosmarus.KB229312.1                              509079  8 -   2017862 ----a--tg--t------a--------------ta---a-
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         148258  8 +    630418 ----a--ca--g------g--------------ta---a-
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          82646  8 -    150152 ----g--ca--g------g--------------ta---a-
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  2785431  8 -  10937097 ----a--ta--c------a--------------ta---a-
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       466427  8 -    559221 ----a--ta--t------a--------------ta---a-
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         7376  3 +      8798 --GAA-----------------------------------
i Otolemur_crassicaudatus.k141_222918                    I 7 I 1
s Otolemur_garnettii.GL873799.1                             699615  3 -   1103335 --GAA-----------------------------------
i Otolemur_garnettii.GL873799.1                          I 7 I 1
s Ovis_aries.CM001607.2                                   17591093  8 +  44047080 ----a--ca--g------g--------------ta---a-
i Ovis_aries.CM001607.2                                  I 7 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      179245  8 -    191736 ----a--ca--g------g--------------ta---a-
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    49248 14 +     80009 tcaTA--CA--C------A--------------TAT--AA
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189148118 14 + 189151597 tcatA--CA--C------A--------------TAT--AA
i Pan_troglodytes.CM009242.2                             I 19 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  154493  8 +    230217 ----a--ta--c------a--------------ca---a-
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                267809  8 +  18783137 ----a--ta--c------a--------------ca---a-
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4724629  8 -   8748460 ----a--ta--c------a--------------ca---a-
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1269975  8 -   2937107 ----a--ca--g------g--------------ta---a-
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183448878 16 + 183742232 TCATAGGCA--A------A--------------TAA--AG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            12390 14 +     20448 TCATA--CA--A------A--------------TAT--AA
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20569205 14 +  20919399 TCATA--CA--A------A--------------TAT--AA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                  11153 13 +     41871 TCATA--CA--A------A---------------AT--AA
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    14431 14 +     27711 TCATA--CA--A------A--------------TAT--AA
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  5412 14 -     11374 TCATA--CA--A------A--------------TAT--AA
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15890  8 -     78924 ----g--ta--t------a--------------cg---a-
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1182643                            369 17 -      3244 --ATA--TA--TAAAAAAA---------------AT--AT
i Perodicticus_ibeanus.k141_1182643                      I 7 C 0
s Perodicticus_potto.k141_1186926                              747 18 +     10374 --ATA--TA--TAAAAAAA--------------TAT--AT
i Perodicticus_potto.k141_1186926                        I 7 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              12502  8 +     63832 ----a--ta--c------a--------------ta---a-
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            3787 14 +     68526 TCATA--CA--A------A--------------TAT--GA
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        43922 14 +     89929 TCATA--CA--A------A--------------TAT--GA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            45338 14 +     51399 TCATA--CA--A------A--------------TAT--GA
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14301574 14 -  14605196 TCATA--CA--A------A--------------TAT--GA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             6027  8 +     22620 ----t--TG--T------A--------------TA---A-
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pithecia_albicans.k141_1476471                              7345 14 +     26961 tcata--ca--c------a--------------tac--aa
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          3466 14 +     23417 Ccata--ca--c------a--------------tac--aa
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                7329 14 +     29694 tCATA--CA--C------A--------------TAC--AA
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          32367 14 +     52772 tcata--ca--c------a--------------tac--aa
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           7355 14 +     26198 tcata--ca--c------a--------------tac--aa
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3943882 14 +   4542175 CCATA--CA--C------A--------------TAC--AA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            7325 14 -     23490 tcata--ca--c------a--------------tac--aa
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610           2038  8 +      7680 ----a--ta--c------a--------------ta---a-
i Platanista_gangetica.PlaMin_flattened_line_173610      C 0 C 0
s Pongo_abelii.CM009266.2                                189136728 14 + 189387572 tcCTA--CA--C------A--------------TAT--AA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9576338 14 +   9816681 TCCTA--CA--C------A--------------TAT--AA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               78868 14 -     81375 TCATA--CA--A------A--------------TAT--TA
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                             10704 14 +     19060 TCATA--CA--A------A--------------TAT--TA
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Pteronotus_parnellii.KE909381.1                            18135  8 -     21811 ----g--ta--t------g--------------ta---a-
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_76658          1314  8 -      3818 ----a--tg--t------a--------------ta---a-
i Pteronura_brasiliensis.PteBra_flattened_line_76658     C 0 C 0
s Pteropus_alecto.KB030862.1                              22987529  4 +  28871421 ------------------a--------------ta---a-
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1371089  4 +   4952924 ------------------a--------------ta---a-
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20277699  8 -  38429054 ----a--ta--t------a--------------ca---a-
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             20681 14 -     91421 TCATA--CA--A------A--------------TAT--TA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7614806 14 +   7812017 TCATA--CA--A------A--------------TAT--TA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             20711 14 -     72585 TCATA--CA--A------A--------------TAT--TA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                 10094  8 +     55207 ----a--ca--g------g--------------ta---a-
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        370286 10 -   3329780 ----acaca--c------a--------------ca---c-
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_1041714                            1274 14 +      5697 TCATA--GA--A------A--------------TAT--TA
i Rhinopithecus_bieti.k119_1041714                       C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91241747 14 - 195417433 TCATA--GA--A------A--------------TAT--TA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7677396 14 +   7961872 TCATA--GA--A------A--------------TAT--TA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_121563                 362  4 +      1157 ------------------a--------------ta---a-
i Rousettus_aegyptiacus.RouAeg_scaffold_121563           C 0 C 0
s Saguinus_bicolor.k141_8081                                  3041 14 +     42994 acata--ca--c------a--------------tac--aa
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_228412                               123 14 +      6556 tcata--ca--c------a--------------tac--aa
i Saguinus_imperator.k141_228412                         C 0 C 0
s Saguinus_inustus.k141_3945547                               2683 14 -      8737 tcata--ca--c------a--------------tac--aa
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_4004060                              2284 14 +      2343 tcata--ca--c------a--------------tac--aa
i Saguinus_labiatus.k141_4004060                         C 0 C 0
s Saguinus_midas.LG03                                    209476697 14 + 209938924 tcata--ca--c------a--------------tac--aa
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                1495 14 -      7576 tcata--ca--c------a--------------tac--aa
i Saguinus_mystax.k141_4699220                           C 0 I 1
s Saiga_tatarica.SaiTat_scaffold_133311                       2552  8 +      9503 ----a--ca--g------g--------------ta---a-
i Saiga_tatarica.SaiTat_scaffold_133311                  C 0 C 0
s Saimiri_oerstedii.k141_1487881                             41849  6 -     64574 ------------------A--------------TAC--AA
i Saimiri_oerstedii.k141_1487881                         I 7 C 0
s Saimiri_sciureus.k141_2278166                               4923  6 -     23631 ------------------A--------------TAC--AA
i Saimiri_sciureus.k141_2278166                          I 7 C 0
s Saimiri_boliviensis.NW_024100920.1                     119952743  7 - 121099817 tcgtA--CA-------------------------------
i Saimiri_boliviensis.NW_024100920.1                     C 0 I 6
s Saimiri_cassiquiarensis.k141_2188234                       25079  7 +     46362 TCGTA--CA-------------------------------
i Saimiri_cassiquiarensis.k141_2188234                   C 0 I 6
s Saimiri_macrodon.k141_716185                               25176  7 +     45824 TCGTA--CA-------------------------------
i Saimiri_macrodon.k141_716185                           C 0 I 6
s Saimiri_ustus.k141_1484609                                 25070  7 -     61129 TCGTA--CA-------------------------------
i Saimiri_ustus.k141_1484609                             C 0 I 6
s Sapajus_apella.ctg103                                    5422434 14 -   5703754 tcgta--ca--c------a--------------tac--aA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          57673 14 -     80660 TCGTA--CA--C------A--------------TAC--AA
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Semnopithecus_entellus.k141_1672505                         5540 14 -     12572 TCATA--CA--A------A--------------TAT--TA
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      32393 14 +     39453 TCATA--CA--A------A--------------TAT--TA
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           12897 14 +     27826 TCATA--CA--A------A--------------TAT--TA
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            12443 14 -     19483 TCATA--CA--A------A--------------TAT--TA
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      5739 14 -     12762 TCATA--CA--A------A--------------TAT--TA
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           5582 14 +     13763 TCATA--CA--A------A--------------TAT--TA
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               5231  8 +   1910179 ----A--CA--T------A--------------TA---A-
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             33381  8 +     97271 ----t--tg--t------a--------------ta---a-
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              21944  8 -    196729 ----a--ta--t------a--------------ca---a-
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6815048  8 +  69701581 ----a--tg--t------a--------------ta---a-
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                14780  8 +     41958 ----g--tg--T------A--------------TA---A-
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      122308 10 -    156842 ----a--tatat------a--------------ta---a-
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    390789 10 +    539355 ----a--tatat------a--------------ta---a-
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               29405 12 +     70052 --CTA--TA--T------G--------------TAT--AT
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                4205 12 -     16117 --TTA--TA--T------G--------------TAT--AT
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186434062 14 + 186847797 TCATA--CA--A------A--------------TAT--AA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     84060  2 +    610378 ----------------------------------C---A-
i Tonatia_saurophila.TonSau_scaffold_294                 I 714 C 0
s Trachypithecus_auratus.k141_722599                         16479 14 -     20410 TCATA--CA--A------A--------------TAT--TA
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      5599 14 -     12674 TCATA--CA--A------A--------------TAT--TA
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       16587 14 +     19930 TCATA--CA--A------A--------------TAT--TA
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      12987 14 -     19997 TCATA--CA--A------A--------------TAT--TA
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            53130 14 -     60166 TCATA--CA--A------A--------------TAT--TA
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        20593 14 -     27529 TCATA--CA--A------A--------------TAT--TA
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                       2221 14 +      9229 TCATA--CA--A------A--------------TAT--TA
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          14120 14 -     21137 TCATA--CA--A------A--------------TAT--TA
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                    2225 14 +      9131 TCATA--CA--A------A--------------TAT--TA
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                         2184 14 -      3730 TCATA--CA--A------A--------------TAT--TA
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        30453 14 +     32220 TCATA--CA--A------A--------------TAT--TA
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5944551 14 +   6242583 TCATA--CA--A------A--------------TAT--TA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       13808 14 +     20839 TCATA--CA--A------A--------------TAT--TA
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    3973  8 +     27266 ----a--ta--g------a--------------ta---a-
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tupaia_chinensis.KB320699.1                              2166677 11 +   4065304 --gtg--tg--t------a--------------tat--a-
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       3042 11 +     70247 --ATG--TA--T------A--------------TAT--G-
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15741683  8 +  33153633 ----a--ta--c------a--------------ta---a-
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   57781  8 -     77625 ----t--ta--t------a--------------ta---a-
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4853040  8 -   5085361 ----a--tg--c------a--------------ta---a-
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 14543  8 -     43706 ----a--ta--t------a--------------ta---a-
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_1424488            316  8 -       542 ----a--ta--c------a--------------ta---a-
i Ziphius_cavirostris.ZipCav_flattened_line_1424488      C 0 C 0
e Cheracebus_torquatus.k141_1170026                          64344 81 +     76511 I
e Cheracebus_regulus.k141_471822                            159875 81 -    216457 I
e Cheracebus_lugens.k141_1393925                              2308 81 +     17877 I
e Cheracebus_lucifer.k141_49986                               2432 81 -     17098 I
e Plecturocebus_moloch.k141_1031110                          25240 158 -     89403 I
e Plecturocebus_miltoni.k141_349282                          27867 148 +     90634 I
e Plecturocebus_hoffmannsi.k141_3303950                      32394 156 +     67232 I
e Plecturocebus_grovesi.k141_2013005                         32198 160 +     60166 I
e Plecturocebus_dubius.k141_1058799                          25236 146 -     87928 I
e Plecturocebus_cupreus.k141_2351393                         11453 152 +     39403 I
e Plecturocebus_cinerascens.k141_1164729                     25783 136 +     88961 I
e Plecturocebus_caligatus.k141_1382851                       24956 158 +     87950 I
e Plecturocebus_brunneus.k141_1495506                        20694 156 +     34906 I
e Plecturocebus_bernhardi.k141_2549090                       11531 156 -     39866 I
e Echinops_telfairi.JH980293.1                            48781896  0 + 111700974 C
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Mus_pahari.LT608297.1                                   31359383 11 -  89631738 I
e Mus_spretus.CM004101.1                                  90757467 11 - 130317789 I
e Mus_musculus.chr8                                       87654680 11 - 129401213 I
e Mus_caroli.LT608237.1                                   84365276 11 - 120012414 I
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1494  0 +      4343 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      17784 11 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Xerus_inauris.XerIna_scaffold_2302                          4485 13 +    224448 I
e Vicugna_pacos.KN270157.1                                 5374276 47 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294973  0 +  10818551 C
e Tolypeutes_matacus.TolMat_scaffold_85600                    5751  1 +     18632 I
e Thryonomys_swinderianus.ThrSwi_scaffold_1223              108121  7 +    114563 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Spermophilus_dauricus.KZ294078.1                         1957430 24 -   3870691 I
e Sorex_araneus.JH798187.1                                13653314 9235 -  18376816 I
e Sigmodon_hispidus.SigHis_scaffold_42075                     4516 20 -     30804 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    156307 109 -    313613 I
e Rattus_norvegicus.chr16                                 53574703 11 +  90668790 I
e Psammomys_obesus.NESX01036370.1                            15300 11 -     21651 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15806  0 -     22811 C
e Petromus_typicus.PetTyp_scaffold_221660                     1293 296 -      2102 I
e Peromyscus_maniculatus.KI615324.1                       18215268 11 -  18517816 I
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                       107181400  0 - 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12287  0 -     18566 C
e Onychomys_torridus.OnyTor_scaffold_2986                    84561 11 +    102263 I
e Ondatra_zibethicus.OndZib_scaffold_7387                      632 3336 +    140218 I
e Octodon_degus.JH651603.1                                  750513 17 +  11899542 I
e Ochotona_princeps.JH802162.1                             1368274 11 +   3988456 I
e Nannospalax_galili.KL204047.1                            2040230  7 -   3037898 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Myocastor_coypus.MyoCoy_scaffold_10123                     73869  7 -     80779 I
e Muscardinus_avellanarius.MusAve_scaffold_82313              9258 14 +     14296 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    24609  0 -    145209 C
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184766 1004 -  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 37694 11 +    140813 I
e Marmota_marmota.CZRN01000018.1                          33106629 24 -  40650429 I
e Manis_pentadactyla.KN006162.1                              54034 31 -    317179 I
e Manis_javanica.JSZB01003497.1                              21892 31 +    737560 I
e Loxodonta_africana.GL010049.1                            4219685  0 -  43346337 C
e Lepus_americanus.LepAme_scaffold_107385                     5119  0 +     14121 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Jaculus_jaculus.JH725527.1                               8279032 12 -   9596543 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Ictidomys_tridecemlineatus.JH393364.1                    7525557 13 -   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                      85523  7 +    135385 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            27359  7 -    143317 I
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3353  0 +      7595 C
e Heterocephalus_glaber.JH602082.1                        20664195 469 +  22651954 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Graphiurus_murinus.GraMur_scaffold_10447                   37413 14 +     78134 I
e Glis_glis.GliGli_scaffold_19807                            35790 14 +     49224 I
e Fukomys_damarensis.KN121974.1                             853051  7 +   3816255 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Ellobius_talpinus.LOJH01081419.1                            5041 11 +      8657 I
e Ellobius_lutescens.LOEQ01008920.1                          25111 11 -    110024 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dolichotis_patagonum.DolPat_scaffold_30833                 35946 23 -     42551 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    43755 17 +     67921 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            70652  1 +   2246927 I
e Dasyprocta_punctata.DasPun_flattened_line_15900             3241  7 -     75252 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenomys_sociabilis.CteSoc_scaffold_29687                  38612  7 +     51376 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    839213  0 +   1526836 C
e Cricetulus_griseus.LT883664.1                           11669751 11 + 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_18520                 54228 11 +     63868 I
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1260426 17 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            7648  1 -      8501 I
e Cavia_tschudii.CavTsc_scaffold_8919                       103394 23 +    143979 I
e Cavia_porcellus.DS562891.1                              18364512 23 -  23407841 I
e Cavia_aperea.AVPZ01000300.1                             18352252 23 -  23392119 I
e Castor_canadensis.CasCan_scaffold_2074                    140386 13 +    179628 I
e Capromys_pilorides.CapPil_scaffold_65020                    3692  7 -     12242 I
e Camelus_ferus.KB017975.1                                  405530 47 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2337232 47 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10004760 47 -  17673402 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I
e Aplodontia_rufa.AprRuf_scaffold_68852                      15968 13 +     20879 I
e Allactaga_bullata.AllBul_scaffold_9566                     76281 30 -     89534 I
e Acomys_cahirinus.AcoCah_scaffold_12655                     74750 11 +     87051 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      11948  6 +     62944 A-----------A---CA-----CT
s Acinonyx_jubatus.LLWD01001279.1                           835315  6 -   1699592 a-----------a---ca-----ct
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     74761  3 +     87051 -----------------A-----CA
i Acomys_cahirinus.AcoCah_scaffold_12655                 I 11 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9513267  6 -  29979442 a-----------a---ca-----at
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             82172  5 -    347723 a-----------a----a-----at
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     76311  3 -     89534 -----------------A-----CC
i Allactaga_bullata.AllBul_scaffold_9566                 I 30 C 0
s Allenopithecus_nigroviridis.k141_3361533                   20192  6 -     52922 G-----------A---CA-----CT
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         20114  6 -     28001 G-----------A---CA-----CT
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                         10607  6 -     18505 G-----------A---CA-----CT
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                          11479  6 -     12518 G-----------A---CA-----CT
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             11799  6 +     51355 A-----------A---CA-----CT
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                4910  6 -     36483 A-----------A---CA-----CT
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              15358  6 +     28687 A-----------A---CA-----CT
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 3845  6 +     27940 a-----------a---ca-----ct
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            4919  6 -      9457 A-----------A---CA-----CT
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             3877  6 +     30492 A-----------A---CA-----CT
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              8098  6 +     47717 A-----------A---CA-----CT
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              4611  6 +      5663 a-----------a---ca-----ct
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             19068  6 +     50774 a-----------a---ca-----ct
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          680984  6 -   2318259 a-----------a---ca-----ct
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      188207  6 +    412891 A-----------A---TA-----CT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303              2251  6 -     32520 a-----------a---ca-----ct
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 C 0
s Aotus_azarae.k141_3104676                                  17664  6 -     33861 A-----------A---CA-----CT
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            17655  6 -     34016 A-----------A---CA-----CT
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4300078  6 -   5030052 a-----------a---ca-----ct
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             17693  6 -     34685 A-----------A---CA-----CT
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               30814  6 -     47192 A-----------A---CA-----CT
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      15981  3 +     20879 -----------------A-----CT
i Aplodontia_rufa.AprRuf_scaffold_68852                  I 13 C 0
s Arctocebus_calabarensis.k141_1648548                         706  6 +      5281 A-----------T---CA-----CT
i Arctocebus_calabarensis.k141_1648548                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  7616  6 +     43469 A-----------A---CA-----CT
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21212303  6 -  21539123 a-----------a---ca-----ct
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               47090  6 -     48001 a-----------a---ca-----ct
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 29895  6 -     30947 a-----------a---ca-----ct
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               11676  6 -     89868 a-----------a---ca-----ct
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              16064  6 -     40414 a-----------a---ca-----ct
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                23937  6 +     72325 a-----------a---ca-----ct
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15195324  6 +  23207421 a-----------a---ca-----ct
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         5789  6 -     18090 a-----------a---ca-----ct
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    32064  6 +     34529 a-----------a---ca-----ct
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    204699  6 -    288883 a-----------a---ct-----ct
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20277936  6 +  48749331 a-----------a---ct-----ct
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1130490  6 -   1948126 a-----------a---ct-----ct
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18088574  6 +  45695690 a-----------a---ct-----ct
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2824524  6 +   4408762 a-----------a---ct-----ct
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                104953  6 -    122966 a-----------t---ca-----ct
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   64446  6 +     81800 a-----------t---CA-----CT
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  33638  6 -     95584 a-----------t---ca-----ct
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         57734  6 -    119600 a-----------t---ca-----ct
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_10318                               1359  6 +     27907 A-----------A---CA-----CG
i Callibella_humilis.k141_10318                          C 0 C 0
s Callimico_goeldii.k141_737284                               1005  6 -     31217 A-----------A---CA-----CG
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                             1301  6 +      5377 A-----------A---CA-----CA
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23593152  6 - 189096842 A-----------A---CA-----CA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1978  6 -     12329 A-----------A---CA-----CA
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s CanFam4.chr16                                           17802936  6 -  60362399 a-----------a---ca-----tt
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     3682  6 -     43241 a-----------a---ca-----tt
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9038377  6 -   9314153 a-----------a---ca-----tt
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17962853  6 -  59632846 a-----------a---ca-----tt
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18504150  6 +  63665305 a-----------a---ca-----tt
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18835009  6 +  46296322 a-----------a---ca-----ct
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18065810  6 -  44709034 a-----------a---ca-----ct
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    3699  2 -     12242 -----------------------AG
i Capromys_pilorides.CapPil_scaffold_65020               I 7 C 0
s Carlito_syrichta.NW_007259797.1                           158922  6 -    496798 a-----------t---ca-----CT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                7959  6 -     11696 A-----------A---CC-----CT
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    140399  3 +    179628 -----------------A-----CA
i Castor_canadensis.CasCan_scaffold_2074                 I 13 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     97457  6 +    217609 a-----------a---ca-----tt
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18352275  2 -  23392119 -----------------------AT
i Cavia_aperea.AVPZ01000300.1                            I 23 C 0
s Cavia_porcellus.DS562891.1                              18364535  2 -  23407841 -----------------------AT
i Cavia_porcellus.DS562891.1                             I 23 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                       103417  2 +    143979 -----------------------AT
i Cavia_tschudii.CavTsc_scaffold_8919                    I 23 C 0
s Cebuella_pygmaea.k141_793006                                1000  6 -     15088 A-----------A---CA-----TG
i Cebuella_pygmaea.k141_793006                           C 0 C 0
s Cebus_albifrons.Contig27                                25654480  6 +  26074798 a-----------a---ca-----ct
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                2424  6 +     28840 A-----------A---CA-----CT
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 2145  6 +     14051 A-----------A---CA-----CT
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         8726  6 +     31688 a-----------t---ca-----ct
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12235002  6 +  27778364 a-----------a---ca-----ct
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           6025  6 -     25243 a-----------a---ca-----ct
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4481127  6 +   4669795 G-----------A---CA-----CT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        5640  6 +     17872 G-----------A---CA-----CT
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           6228  6 -     14043 G-----------A---CA-----CT
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          14321  6 +     27781 G-----------A---CA-----CT
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        14476  6 -     20310 G-----------A---CA-----CT
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          17453  6 +     29689 G-----------A---CA-----CT
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           12214  6 -     20078 G-----------A---CA-----CT
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          20126  6 -     27936 G-----------A---CA-----CT
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            9005  6 -     17152 G-----------A---CA-----CT
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38828728  6 +  39242232 g-----------a---ca-----cT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21228243  6 -  21565898 G-----------A---CA-----CT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       45347  6 -     53127 G-----------A---CA-----CT
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        5602  6 +     13442 G-----------A---CA-----CT
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       20148  6 -     27947 G-----------A---CA-----CT
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         3174  6 +     10558 G-----------A---CA-----CT
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          6189  6 +     14005 G-----------A---CA-----CT
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chiropotes_albinasus.k141_2206961                           3090  6 -     15524 a-----------a---ca-----cG
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chiropotes_israelita.k141_747660                          102063  6 +    146308 a-----------a---ca-----ct
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          33882  6 -     50570 a-----------a---ca-----ct
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18434054  6 -  18827391 G-----------A---CA-----CT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       20549  6 -     50209 G-----------A---CA-----CT
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135427555  6 + 135778131 G-----------A---CA-----CT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1916092  4 +   2368649 ----------------CA-----CT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199954333  4 + 200372422 ----------------CA-----CT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              42642  4 +     84244 ----------------CA-----CT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17552964  3 -  53390261 c-----------a---c--------
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           4196  4 +     23735 A-----------A---CA-------
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      I 18 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 54239  3 +     63868 -----------------A-----CA
i Cricetomys_gambianus.CriGam_scaffold_18520             I 11 C 0
s Cricetulus_griseus.LT883664.1                           11669762  3 + 224834208 -----------------A-----CA
i Cricetulus_griseus.LT883664.1                          I 11 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               7012  6 -     19598 A-----------AAACT--------
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             31867  6 -     87169 a-----------a---ca-----ct
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  38619  2 +     51376 -----------------------AT
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 7 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900             3248  2 -     75252 -----------------------AT
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 7 C 0
s Delphinapterus_leucas.KZ290073.1                        16815199  6 +  35494412 a-----------a---ca-----ct
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8632964  6 +  20541912 A-----------A---CA-----CT
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  676844  6 +   1390856 a-----------a---ca-----ct
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    9604  6 +    198055 a-----------a---ca-----ct
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 35969  2 -     42551 -----------------------AT
i Dolichotis_patagonum.DolPat_scaffold_30833             I 23 C 0
s Eidolon_helvum.KE797349.1                                   1086  6 -     31197 a-----------a---ca-----ct
i Eidolon_helvum.KE797349.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       315466  6 +    607251 a-----------a---ca-----ct
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          25122  3 -    110024 -----------------A-----CA
i Ellobius_lutescens.LOEQ01008920.1                      I 11 C 0
s Ellobius_talpinus.LOJH01081419.1                            5052  3 +      8657 -----------------A-----CA
i Ellobius_talpinus.LOJH01081419.1                       I 11 C 0
s Enhydra_lutris.KZ291758.1                               16339385  5 -  41312741 a-----------a----a-----ct
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2151473  6 -  14770903 A-----------A---CA-----CT
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1287138  6 +   4378816 a-----------a---ca-----ct
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18534946  6 -  39960074 a-----------a---ca-----ct
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               36975  6 +    498745 a-----------a---ca-----ct
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21210724  6 -  21539334 G-----------A---CA-----CT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           14622  6 +    133382 a-----------a---ca-----ct
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             28568  6 -     44125 a-----------a---ca-----ct
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20240447  6 + 206538554 a-----------a---ca-----ct
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20199318  6 + 205367284 a-----------a---ca-----ct
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 12979  6 -     36744 a-----------a---ca-----tt
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             853058  2 +   3816255 -----------------------AT
i Fukomys_damarensis.KN121974.1                          I 7 C 0
s Galago_moholi.ctg2040                                     429905  6 -    453645 A-----------T---CA-----CT
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             7599  6 +     11339 A-----------T---CA-----CT
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            4854  6 +     41679 A-----------T---CA-----CT
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               6200  6 -      9135 a-----------t---ta-----ct
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     612708  6 -    660261 a-----------a---ca-----ct
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_19807                            35804  3 +     49224 -----------------a-----ct
i Glis_glis.GliGli_scaffold_19807                        I 14 C 0
s Gorilla_beringei.k141_3596273                              21160  6 -     32273 A-----------A---CA-----CT
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186343276  6 + 186649187 A-----------A---CA-----CT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   37427  3 +     78134 -----------------a-----ct
i Graphiurus_murinus.GraMur_scaffold_10447               I 14 C 0
s Helogale_parvula.HelPar_flattened_line_2585               245678  6 +    327341 a-----------a---ca-----ct
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 23303  6 +     36099 a-----------a---ca-----ct
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               114044  6 +    128679 a-----------a---ca-----ct
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       113864 17 +   1711038 acacacacacaca---ca-----ca
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188               2416 17 +      9903 acacacacacaca---ca-----ca
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 C 0
s Hoolock_leuconedys.ctg274                                    440410  6 +    630532 A-----------A---CA-----CT
i Hoolock_leuconedys.ctg274                                 I 5 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  48629  6 +     55795 A-----------A---CA-----TC
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            27366  2 -    143317 -----------------------at
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 7 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      85530  2 +    135385 -----------------------GT
i Hystrix_cristata.HysCri_scaffold_5660                  I 7 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7525570  3 -   7955117 -----------------A-----CT
i Ictidomys_tridecemlineatus.JH393364.1                  I 13 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                2406  6 -     31341 a-----------a---ca-----ct
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8279044  3 -   9596543 -----------------A-----CC
i Jaculus_jaculus.JH725527.1                             I 12 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                 2145  6 -     18011 a-----------a---ca-----ct
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         18123  6 -     38430 a-----------a---ca-----ct
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    20898  6 -     42476 A-----------A---CA-----CT
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 C 0
s Leontocebus_fuscicollis.k141_1820339                       10159  4 +     64341 ----------------CA-----CG
i Leontocebus_fuscicollis.k141_1820339                   I 1 C 0
s Leontocebus_illigeri.k141_1304848                           2500  4 -     35062 ----------------ca-----cG
i Leontocebus_illigeri.k141_1304848                      I 1 C 0
s Leontocebus_nigricollis.k141_4610752                       10346  4 +     35603 ----------------ca-----TG
i Leontocebus_nigricollis.k141_4610752                   I 1 C 0
s Leontopithecus_chrysomelas.k141_1519602                    31400  6 +     38576 A-----------A---CA-----CG
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         28104  6 +     66356 A-----------A---CA-----CG
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3059322  5 +   3914936 a-----------a----a-----ct
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             271677  6 -    662738 a-----------a---ca-----ct
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1442682  6 +   1826925 G-----------A---CA-----CT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_399337                            17908  6 -     33856 A-----------T---CA-----CC
i Loris_lydekkerianus.k141_399337                        C 0 C 0
s Loris_tardigradus.ctg83                                  1015619  6 +   6120653 A-----------T---CA-----CC
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17959093  6 -  59628241 a-----------a---ca-----tt
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                              12489  6 +     40492 G-----------A---CA-----CT
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59681736  6 +  60120075 g-----------a---ca-----cT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 18287  6 -     26193 G-----------A---CA-----CT
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            86062  6 -    114318 G-----------A---CA-----CT
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 11751  6 -     23192 G-----------A---CT-----CT
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                21216  6 -     29190 G-----------A---CA-----CT
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  29801  6 +     37952 G-----------A---CA-----CT
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186844868  6 + 187317192 G-----------A---CA-----CT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25463449  6 -  25927173 G-----------A---CA-----CT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  85653  6 +     89720 G-----------A---CA-----CT
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                12665  6 +     20474 G-----------A---CA-----CT
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  12439  6 -     14993 G-----------A---CA-----CT
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  335302  6 -    668171 G-----------A---CA-----CT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                10726  6 -     24072 G-----------A---CA-----CT
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               31372  6 -     45290 G-----------A---CA-----CT
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                  6123  6 +    270270 a-----------a---ca-----ct
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23942957  6 -  24302211 G-----------A---CA-----CT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               357059  6 +    752769 G-----------A---CA-----CT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33106653  3 -  40650429 -----------------A-----CT
i Marmota_marmota.CZRN01000018.1                         I 24 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        16737  6 -    207569 C-----------A---CA-----GT
i Megaderma_lyra.MegLyr_scaffold_4542                    I 35 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             12967  5 +     13704 a-----------a----a-----ct
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 37705  3 +    140813 -----------------A-----GA
i Meriones_unguiculatus.MerUng_scaffold_7390             I 11 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    6835  6 +     10310 a-----------a---ca-----ct
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Mico_argentatus.k141_1024458                                1007  6 -     20047 A-----------A---CA-----CG
i Mico_argentatus.k141_1024458                           C 0 C 0
s Mico_humeralifer.k141_700707                                  44  6 +      5224 A-----------A---CA-----CG
i Mico_humeralifer.k141_700707                           C 0 C 0
s Mico_schneideri.k141_916733                                       1007  6 +      5107 A-----------A---CA-----CG
i Mico_schneideri.k141_916733                                  C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                18922  6 -     19307 A-----------A---CA-----CT
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1853999  6 +   8254450 A-----------A---CA-----CT
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             37677  6 +     64694 a-----------a---ca-----ct
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                          14627  6 -     28506 G-----------A---CA-----CT
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_55178          491  5 +     26817 a-----------a----a-----ct
i Mirounga_angustirostris.MirAng_flattened_line_55178    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    30583  6 -    437263 a-----------a---ca-----ct
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 144591  6 -    366855 a-----------a---ca-----ct
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   4890  6 +     82753 a-----------a---ca-----ct
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_40893                     685  6 +      5729 a-----------a---ca-----ct
i Mungos_mungo.MunMun_flattened_line_40893               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                          11256  6 +     14753 A-----------A---TA-----CT
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84365287  3 - 120012414 -----------------A-----CA
i Mus_caroli.LT608237.1                                  I 11 C 0
s Mus_musculus.chr8                                       87654691  3 - 129401213 -----------------A-----CA
i Mus_musculus.chr8                                      I 11 C 0
s Mus_pahari.LT608297.1                                   31359394  3 -  89631738 -----------------A-----CA
i Mus_pahari.LT608297.1                                  I 11 C 0
s Mus_spretus.CM004101.1                                  90757478  3 - 130317789 -----------------A-----CA
i Mus_spretus.CM004101.1                                 I 11 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              9272  3 +     14296 -----------------A-----CT
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 14 C 0
s Mustela_putorius.JH418006.1                               304465  5 -  14710649 a-----------A----A-----CT
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     73876  2 -     80779 -----------------------at
i Myocastor_coypus.MyoCoy_scaffold_10123                 I 7 C 0
s Myotis_brandtii.KE162005.1                                284741  6 -  10118263 A-----------A---CA-----CT
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1592059  6 -   6019432 A-----------A---CA-----CT
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3908159  6 -   4330536 a-----------a---ca-----ct
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_44643                         2711  6 +     25416 A-----------A---CA-----CT
i Myotis_myotis.MyoMyo_scaffold_44643                    C 0 C 0
s Nannospalax_galili.KL204047.1                            2040237  3 -   3037898 -----------------a-----ca
i Nannospalax_galili.KL204047.1                          I 7 C 0
s Nasalis_larvatus.k141_413338                               20701  4 +     21681 ----------------CA-----CT
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20310262  5 +  31847680 a-----------a----a-----ct
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5869548  6 +   7148211 a-----------a---ca-----ct
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    760817  6 +    783361 a-----------a---ta-----tt
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9153010  6 -   9404916 a-----------a---ca-----tt
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102596123  6 - 196305487 A-----------T---CA-----CC
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1514628                             1590  6 -      5837 A-----------T---CA-----CC
i Nycticebus_coucang.k141_1514628                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105772045  6 + 199412804 A-----------T---CA-----CC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1368285  3 +   3988456 -----------------A-----CT
i Ochotona_princeps.JH802162.1                           I 11 C 0
s Odobenus_rosmarus.KB229312.1                              509087  5 -   2017862 a-----------a----a-----ct
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         148266  6 +    630418 a-----------a---ca-----ct
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          82654  6 -    150152 a-----------a---ca-----ct
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    84572  3 +    102263 -----------------A-----TG
i Onychomys_torridus.OnyTor_scaffold_2986                I 11 C 0
s Orcinus_orca.KB316932.1                                  2785439  6 -  10937097 a-----------a---ca-----ct
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       466435  6 -    559221 a-----------a---ca-----tt
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         7380  6 +      8798 T-----------C---CA-----CT
i Otolemur_crassicaudatus.k141_222918                    I 1 C 0
s Otolemur_garnettii.GL873799.1                             699619  6 -   1103335 T-----------C---CA-----CT
i Otolemur_garnettii.GL873799.1                          I 1 C 0
s Ovis_aries.CM001607.2                                   17591101  6 +  44047080 a-----------a---ca-----ct
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      179253  6 -    191736 a-----------a---ca-----ct
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    49262  6 +     80009 A-----------A---CA-----CT
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189148132  6 + 189151597 A-----------A---CA-----CT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  154501  6 +    230217 a-----------a---ca-----ct
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                267817  6 +  18783137 a-----------a---ca-----ct
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4724637  6 -   8748460 a-----------a---ca-----ct
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1269983  6 -   2937107 a-----------a---ca-----ct
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183448894 11 + 183742232 A-----------A---CAAGCCCTC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_4307930                            12404  6 +     20448 G-----------A---CA-----CT
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20569219  6 +  20919399 G-----------A---CA-----CT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                  11166  6 +     41871 G-----------A---CA-----CT
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    14445  6 +     27711 G-----------A---CA-----CT
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  5426  6 -     11374 G-----------A---CA-----CT
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15898  6 -     78924 a-----------a---ca-----ct
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1182643                            386  6 -      3244 A-----------T---CA-----CT
i Perodicticus_ibeanus.k141_1182643                      C 0 C 0
s Perodicticus_potto.k141_1186926                              765  6 +     10374 A-----------T---CA-----CT
i Perodicticus_potto.k141_1186926                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18215279  3 -  18517816 -----------------A-----TG
i Peromyscus_maniculatus.KI615324.1                      I 11 C 0
s Petromus_typicus.PetTyp_scaffold_221660                     1589  2 -      2102 -----------------------AT
i Petromus_typicus.PetTyp_scaffold_221660                I 296 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              12510  6 +     63832 a-----------a---ca-----ct
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            3801  4 +     68526 ----------------CA-----CT
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        43936  4 +     89929 ----------------CA-----CT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            45352  4 +     51399 ----------------CA-----CT
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14301588  4 -  14605196 ----------------CA-----CT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             6035  6 +     22620 A-----------A---CA-----CT
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pithecia_albicans.k141_1476471                              7359  6 +     26961 a-----------a---ca-----ct
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          3480  6 +     23417 a-----------a---ca-----ct
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                7343  6 +     29694 A-----------A---CA-----CT
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          32381  6 +     52772 a-----------a---ca-----ct
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           7369  6 +     26198 a-----------a---ca-----ct
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3943896  6 +   4542175 A-----------A---CA-----CT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            7339  6 -     23490 a-----------a---ca-----ct
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610           2046  6 +      7680 a-----------a---ca-----ct
i Platanista_gangetica.PlaMin_flattened_line_173610      C 0 C 0
s Pongo_abelii.CM009266.2                                189136742  6 + 189387572 A-----------A---CA-----CT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9576352  6 +   9816681 A-----------A---CA-----CT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               78882  4 -     81375 ----------------CA-----CT
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                             10718  4 +     19060 ----------------CA-----CT
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            15311  3 -     21651 -----------------A-----GA
i Psammomys_obesus.NESX01036370.1                        I 11 C 0
s Pteronotus_parnellii.KE909381.1                            18143  6 -     21811 a-----------t---ca-----ct
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_76658          1322  5 -      3818 a-----------a----a-----ct
i Pteronura_brasiliensis.PteBra_flattened_line_76658     C 0 C 0
s Pteropus_alecto.KB030862.1                              22987533  6 +  28871421 a-----------a---ca-----ct
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1371093  6 +   4952924 a-----------a---ca-----ct
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20277707  6 -  38429054 a-----------a---ca-----ct
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             20695  4 -     91421 ----------------CA-----CT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7614820  4 +   7812017 ----------------CA-----CT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             20725  4 -     72585 ----------------CA-----CT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                 10102  6 +     55207 a-----------a---ca-----ct
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53574714  3 +  90668790 -----------------A-----CA
i Rattus_norvegicus.chr16                                I 11 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        370296 17 -   3329780 acacacacacaca---ca-----ct
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_1041714                            1288  4 +      5697 ----------------CA-----CT
i Rhinopithecus_bieti.k119_1041714                       C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91241761  4 - 195417433 ----------------CA-----CT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7677410  4 +   7961872 ----------------CA-----CT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_121563                 366  6 +      1157 a-----------a---ca-----ct
i Rousettus_aegyptiacus.RouAeg_scaffold_121563           C 0 C 0
s Saguinus_bicolor.k141_8081                                  3055  6 +     42994 a-----------a---ca-----ca
i Saguinus_bicolor.k141_8081                             C 0 I 610
s Saguinus_imperator.k141_228412                               137  6 +      6556 a-----------a---ca-----ca
i Saguinus_imperator.k141_228412                         C 0 I 48
s Saguinus_inustus.k141_3945547                               2697  6 -      8737 a-----------a---ca-----ca
i Saguinus_inustus.k141_3945547                          C 0 I 60
s Saguinus_labiatus.k141_4004060                              2298  6 +      2343 a-----------a---ca-----ca
i Saguinus_labiatus.k141_4004060                         C 0 N 0
s Saguinus_midas.LG03                                    209476711  6 + 209938924 a-----------a---ca-----ca
i Saguinus_midas.LG03                                    C 0 I 334
s Saguinus_mystax.k141_4699220                                1510  3 -      7576 -----------------a-----ca
i Saguinus_mystax.k141_4699220                           I 1 I 62
s Saiga_tatarica.SaiTat_scaffold_133311                       2560  6 +      9503 g-----------a---ca-----ct
i Saiga_tatarica.SaiTat_scaffold_133311                  C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119952756  6 - 121099817 A-----------A---CA-----CT
i Saimiri_boliviensis.NW_024100920.1                     I 6 C 0
s Saimiri_cassiquiarensis.k141_2188234                       25092  6 +     46362 A-----------A---CA-----CT
i Saimiri_cassiquiarensis.k141_2188234                   I 6 C 0
s Saimiri_macrodon.k141_716185                               25189  6 +     45824 A-----------A---CA-----CT
i Saimiri_macrodon.k141_716185                           I 6 C 0
s Saimiri_oerstedii.k141_1487881                             41855  6 -     64574 A-----------A---CA-----CT
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4929  6 -     23631 A-----------A---CA-----CT
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 25083  6 -     61129 A-----------A---CA-----CT
i Saimiri_ustus.k141_1484609                             I 6 C 0
s Sapajus_apella.ctg103                                    5422448  6 -   5703754 A-----------A---CA-----CT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          57687  6 -     80660 A-----------A---CA-----CT
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Semnopithecus_entellus.k141_1672505                         5554  4 -     12572 ----------------CA-----CT
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      32407  4 +     39453 ----------------CA-----CT
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           12911  4 +     27826 ----------------CA-----CT
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            12457  4 -     19483 ----------------CA-----CT
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      5753  4 -     12762 ----------------CA-----CT
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           5596  4 +     13763 ----------------CA-----CT
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     4536  3 -     30804 -----------------A-----CA
i Sigmodon_hispidus.SigHis_scaffold_42075                I 20 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               5239  3 +   1910179 A-----------A---C--------
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1957454  3 -   3870691 -----------------A-----CT
i Spermophilus_dauricus.KZ294078.1                       I 24 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             33389  5 +     97271 a-----------a----a-----ct
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              21952  6 -    196729 a-----------a---ca-----ct
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6815056  6 +  69701581 a-----------a---ca-----ct
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                14788  6 +     41958 A-----------A---CA-----CT
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      122318  6 -    156842 a-----------a---ca-----ct
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    390799  6 +    539355 a-----------a---ca-----ct
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               29417  6 +     70052 A-----------T---CA-----CC
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                4217  6 -     16117 A-----------T---CA-----CT
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186434076  6 + 186847797 G-----------A---CA-----CT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              108128  2 +    114563 -----------------------AT
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           I 7 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     84062  6 +    610378 A-----------A---CA-----CT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         16493  4 -     20410 ----------------CA-----CT
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      5613  4 -     12674 ----------------CA-----CT
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       16601  4 +     19930 ----------------CA-----GT
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      13001  4 -     19997 ----------------CA-----CT
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            53144  4 -     60166 ----------------CA-----CT
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        20607  4 -     27529 ----------------CA-----CT
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                       2235  4 +      9229 ----------------CA-----CT
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          14134  4 -     21137 ----------------CA-----CT
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                    2239  4 +      9131 ----------------CA-----CT
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                         2198  4 -      3730 ----------------CA-----CT
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        30467  4 +     32220 ----------------CA-----CT
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5944565  4 +   6242583 ----------------CA-----CT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       13822  4 +     20839 ----------------CA-----CT
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    3981  6 +     27266 a-----------a---ta-----ct
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tupaia_chinensis.KB320699.1                              2166688  6 +   4065304 a-----------a---ca-----cT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       3053  6 +     70247 A-----------A---CA-----CT
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15741691  6 +  33153633 a-----------a---ca-----ct
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   57789  3 -     77625 c-----------a---c--------
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4853048  6 -   5085361 a-----------a---ca-----ct
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 14551  6 -     43706 a-----------a---ca-----tt
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          4498  3 +    224448 -----------------A-----CT
i Xerus_inauris.XerIna_scaffold_2302                     I 13 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_1424488            324  6 -       542 a-----------a---ca-----ct
i Ziphius_cavirostris.ZipCav_flattened_line_1424488      C 0 C 0
e Cheracebus_torquatus.k141_1170026                          64344 81 +     76511 I
e Cheracebus_regulus.k141_471822                            159875 81 -    216457 I
e Cheracebus_lugens.k141_1393925                              2308 81 +     17877 I
e Cheracebus_lucifer.k141_49986                               2432 81 -     17098 I
e Plecturocebus_moloch.k141_1031110                          25240 158 -     89403 I
e Plecturocebus_miltoni.k141_349282                          27867 148 +     90634 I
e Plecturocebus_hoffmannsi.k141_3303950                      32394 156 +     67232 I
e Plecturocebus_grovesi.k141_2013005                         32198 160 +     60166 I
e Plecturocebus_dubius.k141_1058799                          25236 146 -     87928 I
e Plecturocebus_cupreus.k141_2351393                         11453 152 +     39403 I
e Plecturocebus_cinerascens.k141_1164729                     25783 136 +     88961 I
e Plecturocebus_caligatus.k141_1382851                       24956 158 +     87950 I
e Plecturocebus_brunneus.k141_1495506                        20694 156 +     34906 I
e Plecturocebus_bernhardi.k141_2549090                       11531 156 -     39866 I
e Echinops_telfairi.JH980293.1                            48781896  0 + 111700974 C
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1494  0 +      4343 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      17784 11 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vicugna_pacos.KN270157.1                                 5374276 47 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294973  0 +  10818551 C
e Tolypeutes_matacus.TolMat_scaffold_85600                    5751  1 +     18632 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Sorex_araneus.JH798187.1                                13653314 9235 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    156307 109 -    313613 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15806  0 -     22811 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                       107181400  0 - 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12287  0 -     18566 C
e Ondatra_zibethicus.OndZib_scaffold_7387                      632 3336 +    140218 I
e Octodon_degus.JH651603.1                                  750513 17 +  11899542 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    24609  0 -    145209 C
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184766 1004 -  29670104 I
e Manis_pentadactyla.KN006162.1                              54034 31 -    317179 I
e Manis_javanica.JSZB01003497.1                              21892 31 +    737560 I
e Loxodonta_africana.GL010049.1                            4219685  0 -  43346337 C
e Lepus_americanus.LepAme_scaffold_107385                     5119  0 +     14121 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3353  0 +      7595 C
e Heterocephalus_glaber.JH602082.1                        20664195 469 +  22651954 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    43755 17 +     67921 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            70652  1 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    839213  0 +   1526836 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1260426 17 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            7648  1 -      8501 I
e Camelus_ferus.KB017975.1                                  405530 47 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2337232 47 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10004760 47 -  17673402 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      11954 4 +     62944 GAC----A
s Acinonyx_jubatus.LLWD01001279.1                           835321 4 -   1699592 GAC----A
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     74764 3 +     87051 -CT----C
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9513273 4 -  29979442 gac----a
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             82177 4 -    347723 gac----a
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     76314 4 -     89534 AGA----A
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   20198 4 -     52922 GAC----A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         20120 4 -     28001 GAC----A
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                         10613 4 -     18505 GAC----A
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                          11485 4 -     12518 GAC----A
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             11805 4 +     51355 GAC----A
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                4916 4 -     36483 GAC----A
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              15364 4 +     28687 GAC----A
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 3851 4 +     27940 gac----a
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            4925 4 -      9457 GAC----A
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             3883 4 +     30492 GAC----A
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              8104 4 +     47717 GAC----A
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              4617 4 +      5663 gac----a
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             19074 4 +     50774 gac----a
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          680990 4 -   2318259 gac----a
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      188213 4 +    412891 GAC----A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303              2257 4 -     32520 gac----a
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 C 0
s Aotus_azarae.k141_3104676                                  17670 4 -     33861 GAC----A
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            17661 4 -     34016 GAC----A
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4300084 4 -   5030052 gac----a
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             17699 4 -     34685 GAC----A
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               30820 4 -     47192 GAC----A
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      15984 4 +     20879 GAG----A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_1648548                         712 4 +      5281 GAC----A
i Arctocebus_calabarensis.k141_1648548                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  7622 4 +     43469 GAA----T
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21212309 4 -  21539123 gac----a
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               47096 4 -     48001 gac----a
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 29901 4 -     30947 gac----a
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               11682 4 -     89868 gac----a
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              16070 4 -     40414 gac----a
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                23943 4 +     72325 gac----a
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15195330 4 +  23207421 gac----a
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         5795 4 -     18090 gac----a
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    32070 4 +     34529 GGC----A
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    204705 4 -    288883 gac----a
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20277942 4 +  48749331 gac----a
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1130496 4 -   1948126 gac----a
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18088580 4 +  45695690 gac----a
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2824530 4 +   4408762 gac----a
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                104959 4 -    122966 gac----a
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   64452 4 +     81800 GAC----A
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  33644 4 -     95584 gac----a
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         57740 4 -    119600 gac----a
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_10318                               1365 4 +     27907 GAC----A
i Callibella_humilis.k141_10318                          C 0 C 0
s Callimico_goeldii.k141_737284                               1011 4 -     31217 GAC----A
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                             1307 4 +      5377 GAC----A
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23593158 4 - 189096842 GAC----A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1984 4 -     12329 GAC----A
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s CanFam4.chr16                                           17802942 4 -  60362399 gac----a
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     3688 4 -     43241 gac----a
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9038383 4 -   9314153 gac----a
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17962859 4 -  59632846 gac----a
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18504156 4 +  63665305 gac----a
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18835015 4 +  46296322 gac----a
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18065816 4 -  44709034 gac----a
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    3701 4 -     12242 GAA----C
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           158928 4 -    496798 GAC----A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                7965 4 -     11696 GAG----A
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    140402 4 +    179628 GAT----A
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     97463 4 +    217609 gac----a
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18352277 4 -  23392119 GAC----A
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18364537 4 -  23407841 GAC----A
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                       103419 4 +    143979 GAC----A
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cebuella_pygmaea.k141_793006                                1006 4 -     15088 GAC----A
i Cebuella_pygmaea.k141_793006                           C 0 C 0
s Cebus_albifrons.Contig27                                25654486 4 +  26074798 cac----a
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                2430 4 +     28840 CAC----A
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 2151 4 +     14051 CAC----A
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         8732 4 +     31688 gac----a
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12235008 4 +  27778364 gac----a
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           6031 4 -     25243 gac----a
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4481133 4 +   4669795 GAC----A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        5646 4 +     17872 GAC----A
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           6234 4 -     14043 GAC----A
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          14327 4 +     27781 GAC----A
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        14482 4 -     20310 GAC----A
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          17459 4 +     29689 GAC----A
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           12220 4 -     20078 GAC----A
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          20132 4 -     27936 GAC----A
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            9011 4 -     17152 GAC----A
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38828734 4 +  39242232 GAC----A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21228249 4 -  21565898 GAC----A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       45353 4 -     53127 GAC----A
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        5608 4 +     13442 AAC----A
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       20154 4 -     27947 GAC----A
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         3180 4 +     10558 GAC----A
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          6195 4 +     14005 GAC----A
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chiropotes_albinasus.k141_2206961                           3096 4 -     15524 GAC----A
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chiropotes_israelita.k141_747660                          102069 4 +    146308 gac----a
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          33888 4 -     50570 gac----a
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18434060 4 -  18827391 GAC----A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       20555 4 -     50209 GAC----A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135427561 4 + 135778131 GAC----A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1916096 4 +   2368649 GAC----A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199954337 4 + 200372422 GAC----A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              42646 4 +     84244 GAC----A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17552967 4 -  53390261 aag----a
i Condylura_cristata.JH655891.1                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 54242 3 +     63868 -CT----T
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11669765 3 + 224834208 -CT----C
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               7018 4 -     19598 AAC----A
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             31873 4 -     87169 gac----a
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  38621 4 +     51376 GAA----A
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900             3250 4 -     75252 GAC----A
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16815205 4 +  35494412 gac----a
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8632970 4 +  20541912 GGC----A
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  676850 4 +   1390856 gac----a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    9610 4 +    198055 gac----a
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 35971 4 -     42551 GAC----A
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 C 0
s Eidolon_helvum.KE797349.1                                   1092 4 -     31197 gac----a
i Eidolon_helvum.KE797349.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       315472 4 +    607251 gac----a
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          25125 3 -    110024 -CT----C
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                            5055 3 +      8657 -CT----C
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16339390 4 -  41312741 gac----a
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2151479 4 -  14770903 GAT----A
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              1287144 4 +   4378816 aac----a
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18534952 4 -  39960074 gac----a
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               36981 4 +    498745 gac----a
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21210730 4 -  21539334 GAC----A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           14628 4 +    133382 gac----a
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             28574 4 -     44125 gac----a
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20240453 4 + 206538554 gac----a
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20199324 4 + 205367284 GAC----A
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 12985 4 -     36744 GAC----A
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             853060 4 +   3816255 GAC----A
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg2040                                     429911 4 -    453645 GAC----A
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             7605 4 +     11339 GAC----A
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            4860 4 +     41679 AAC----A
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               6206 3 -      9135 ga-----a
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     612714 4 -    660261 gac----a
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 I 8
s Glis_glis.GliGli_scaffold_19807                            35807 4 +     49224 gtc----c
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              21166 4 -     32273 GAC----A
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186343282 4 + 186649187 GAC----A
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   37430 4 +     78134 gtc----c
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               245684 8 +    327341 gatagata
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 23309 4 +     36099 gac----a
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               114050 4 +    128679 gac----a
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       113881 5 +   1711038 caca---c
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 2
s Hipposideros_galeritus.HipGal_scaffold_101188               2433 5 +      9903 caca---c
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 I 2
s Hoolock_leuconedys.ctg274                                    440416 4 +    630532 GAC----A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  48635 4 +     55795 GAA----A
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            27368 4 -    143317 tac----a
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      85532 4 +    135385 GAC----A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7525573 4 -   7955117 GAC----G
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                2412 4 -     31341 gac----a
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8279047 4 -   9596543 AGC----A
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                 2151 4 -     18011 gac----a
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         18129 4 -     38430 gac----a
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    20904 4 -     42476 GAT----A
i Lasiurus_borealis.LasBor_scaffold_32767                C 0 I 14
s Leontocebus_fuscicollis.k141_1820339                       10163 4 +     64341 GAC----A
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           2504 4 -     35062 GAC----A
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                       10350 4 +     35603 GAC----A
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    31406 4 +     38576 GAC----A
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         28110 4 +     66356 GAC----A
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3059327 4 +   3914936 gac----a
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             271683 4 -    662738 gac----a
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1442688 4 +   1826925 GAC----A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_399337                            17914 4 -     33856 GAC----A
i Loris_lydekkerianus.k141_399337                        C 0 C 0
s Loris_tardigradus.ctg83                                  1015625 4 +   6120653 GAC----A
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17959099 4 -  59628241 gac----a
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                              12495 4 +     40492 GAC----A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59681742 4 +  60120075 GAC----A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 18293 4 -     26193 GAC----A
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            86068 4 -    114318 GAC----A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 11757 4 -     23192 GAC----A
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                21222 4 -     29190 GAC----A
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  29807 4 +     37952 GAC----A
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186844874 4 + 187317192 GAC----A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25463455 4 -  25927173 GAC----A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  85659 4 +     89720 GAC----A
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                12671 4 +     20474 GAC----A
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  12445 4 -     14993 GAC----A
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  335308 4 -    668171 GAC----A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                10732 4 -     24072 GAC----A
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               31378 4 -     45290 GAC----A
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                  6129 4 +    270270 gac----t
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23942963 4 -  24302211 GAC----A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               357065 4 +    752769 GAC----A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33106656 4 -  40650429 GAC----G
i Marmota_marmota.CZRN01000018.1                         C 0 I 7
s Megaderma_lyra.MegLyr_scaffold_4542                        16743 4 -    207569 GAC----A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             12972 4 +     13704 gac----a
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 37708 3 +    140813 -CT----C
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    6841 4 +     10310 gac----a
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Mico_argentatus.k141_1024458                                1013 4 -     20047 GAC----A
i Mico_argentatus.k141_1024458                           C 0 C 0
s Mico_humeralifer.k141_700707                                  50 4 +      5224 GAC----A
i Mico_humeralifer.k141_700707                           C 0 C 0
s Mico_schneideri.k141_916733                                       1013 4 +      5107 GAC----A
i Mico_schneideri.k141_916733                                  C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                18928 4 -     19307 GAT----G
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1854005 4 +   8254450 GAT----A
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             37683 4 +     64694 gat----a
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 C 0
s Miopithecus_ogouensis.k141_534055                          14633 4 -     28506 GAC----A
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_55178          496 4 +     26817 gac----a
i Mirounga_angustirostris.MirAng_flattened_line_55178    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    30589 4 -    437263 gac----a
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 144597 4 -    366855 aac----g
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   4896 4 +     82753 gac----a
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_40893                     691 4 +      5729 GAC----A
i Mungos_mungo.MunMun_flattened_line_40893               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                          11262 4 +     14753 GAT----A
i Murina_feae.MurFea_scaffold_85699                      C 0 C 0
s Mus_caroli.LT608237.1                                   84365290 3 - 120012414 -CT----T
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87654694 3 - 129401213 -CT----T
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31359397 3 -  89631738 -At----t
i Mus_pahari.LT608297.1                                  C 0 I 203
s Mus_spretus.CM004101.1                                  90757481 3 - 130317789 -CT----T
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              9275 4 +     14296 GTC----C
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 C 0
s Mustela_putorius.JH418006.1                               304470 4 -  14710649 GAC----A
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     73878 4 -     80779 gaa----a
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                284747 4 -  10118263 GAT----A
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                1592065 4 -   6019432 GAT----A
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                              3908165 4 -   4330536 gat----a
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_44643                         2717 4 +     25416 GAT----A
i Myotis_myotis.MyoMyo_scaffold_44643                    C 0 C 0
s Nannospalax_galili.KL204047.1                            2040240 3 -   3037898 -ct----a
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               20705 4 +     21681 GAC----A
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20310267 4 +  31847680 gac----a
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5869554 4 +   7148211 gac----a
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    760823 4 +    783361 gac----a
i Noctilio_leporinus.NocLep_scaffold_251                 C 0 I 6
s Nyctereutes_procyonoides.CAJHUB010000658.1               9153016 4 -   9404916 gac----a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102596129 4 - 196305487 GAC----A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1514628                             1596 4 -      5837 GAC----A
i Nycticebus_coucang.k141_1514628                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105772051 4 + 199412804 GAC----A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1368288 4 +   3988456 GAA----A
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                              509092 4 -   2017862 gac----a
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         148272 4 +    630418 gac----a
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          82660 4 -    150152 gac----a
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 8
s Onychomys_torridus.OnyTor_scaffold_2986                    84575 3 +    102263 -CT----C
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2785445 4 -  10937097 gac----a
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       466441 4 -    559221 gac----g
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         7386 4 +      8798 CAC----A
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             699625 4 -   1103335 AAC----A
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   17591107 4 +  44047080 GAC----C
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      179259 4 -    191736 GAC----C
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    49268 4 +     80009 GAC----A
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189148138 4 + 189151597 GAC----A
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  154507 4 +    230217 gac----a
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                267823 4 +  18783137 GAC----A
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4724643 4 -   8748460 gac----a
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1269989 4 -   2937107 gac----a
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183448905 4 + 183742232 GAC----G
i Papio_anubis.CM001495.2                                C 0 I 1
s Papio_cynocephalus.k141_4307930                            12410 4 +     20448 GAC----A
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20569225 4 +  20919399 GAC----A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                  11172 4 +     41871 GAC----A
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    14451 4 +     27711 GAC----A
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  5432 4 -     11374 GAC----A
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15904 4 -     78924 gac----a
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1182643                            392 4 -      3244 GAC----A
i Perodicticus_ibeanus.k141_1182643                      C 0 C 0
s Perodicticus_potto.k141_1186926                              771 4 +     10374 GAC----A
i Perodicticus_potto.k141_1186926                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18215282 3 -  18517816 -CT----C
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_221660                     1591 4 -      2102 GAC----A
i Petromus_typicus.PetTyp_scaffold_221660                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              12516 4 +     63832 gac----a
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            3805 4 +     68526 GAC----A
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        43940 4 +     89929 GAC----A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            45356 4 +     51399 GAC----A
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14301592 4 -  14605196 GAC----A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             6041 4 +     22620 GAG----A
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 C 0
s Pithecia_albicans.k141_1476471                              7365 4 +     26961 gaC----A
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          3486 4 +     23417 gac----a
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                7349 4 +     29694 GAC----A
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          32387 4 +     52772 gac----a
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           7375 4 +     26198 gac----a
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3943902 4 +   4542175 GAC----A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            7345 4 -     23490 gac----a
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610           2052 4 +      7680 gac----a
i Platanista_gangetica.PlaMin_flattened_line_173610      C 0 C 0
s Pongo_abelii.CM009266.2                                189136748 4 + 189387572 GAC----A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9576358 4 +   9816681 GAC----A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               78886 4 -     81375 GAC----A
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                             10722 4 +     19060 GAC----A
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            15314 3 -     21651 -CT----C
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            18149 4 -     21811 gac----a
i Pteronotus_parnellii.KE909381.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_76658          1327 4 -      3818 gac----a
i Pteronura_brasiliensis.PteBra_flattened_line_76658     C 0 C 0
s Pteropus_alecto.KB030862.1                              22987539 4 +  28871421 gac----a
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1371099 4 +   4952924 gac----a
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20277713 4 -  38429054 gac----a
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             20699 4 -     91421 GAC----A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7614824 4 +   7812017 GAC----A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             20729 4 -     72585 GAC----A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                 10108 4 +     55207 gac----a
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53574717 3 +  90668790 -TT----T
i Rattus_norvegicus.chr16                                C 0 I 1
s Rhinolophus_sinicus.LVEH01000134.1                        370313 5 -   3329780 caca---c
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_1041714                            1292 4 +      5697 GAC----A
i Rhinopithecus_bieti.k119_1041714                       C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91241765 4 - 195417433 GAC----A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7677414 4 +   7961872 GAC----A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_121563                 372 4 +      1157 gac----a
i Rousettus_aegyptiacus.RouAeg_scaffold_121563           C 0 C 0
s Saguinus_bicolor.k141_8081                                  3671 4 +     42994 GAC----A
i Saguinus_bicolor.k141_8081                             I 610 C 0
s Saguinus_imperator.k141_228412                               191 4 +      6556 GAC----A
i Saguinus_imperator.k141_228412                         I 48 C 0
s Saguinus_inustus.k141_3945547                               2763 4 -      8737 GAC----A
i Saguinus_inustus.k141_3945547                          I 60 C 0
s Saguinus_labiatus.k141_3085223                               604 4 +      6551 GAC----A
i Saguinus_labiatus.k141_3085223                         N 0 C 0
s Saguinus_midas.LG03                                    209477051 4 + 209938924 GAC----A
i Saguinus_midas.LG03                                    I 334 C 0
s Saguinus_mystax.k141_4699220                                1575 4 -      7576 GAC----A
i Saguinus_mystax.k141_4699220                           I 62 C 0
s Saiga_tatarica.SaiTat_scaffold_133311                       2566 4 +      9503 gac----a
i Saiga_tatarica.SaiTat_scaffold_133311                  C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119952762 4 - 121099817 CAC----A
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       25098 4 +     46362 CAC----A
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               25195 4 +     45824 CAC----A
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             41861 4 -     64574 CAC----A
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4935 4 -     23631 CAC----A
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 25089 4 -     61129 CAC----A
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5422454 4 -   5703754 CAC----A
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          57693 4 -     80660 CAC----A
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Semnopithecus_entellus.k141_1672505                         5558 4 -     12572 GAC----A
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      32411 4 +     39453 GAC----A
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           12915 4 +     27826 GAC----A
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            12461 4 -     19483 GAC----A
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      5757 4 -     12762 GAC----A
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           5600 4 +     13763 GAC----A
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     4539 3 -     30804 -CT----C
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               5242 4 +   1910179 GGC----A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1957457 4 -   3870691 GAC----G
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             33394 4 +     97271 gac----a
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              21958 4 -    196729 gat----a
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6815062 4 +  69701581 gac----a
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                14794 3 +     41958 GAT-----
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      122324 4 -    156842 gac----a
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    390805 4 +    539355 gac----a
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               29423 4 +     70052 GAC----A
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                4223 4 -     16117 GAC----A
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186434082 4 + 186847797 GAC----A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              108130 4 +    114563 AAC----A
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                     84068 4 +    610378 GAC----A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_722599                         16497 4 -     20410 GAC----A
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      5617 4 -     12674 GAC----A
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       16605 4 +     19930 GAC----A
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      13005 4 -     19997 GAC----A
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            53148 4 -     60166 GAC----A
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        20611 4 -     27529 GAC----A
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                       2239 4 +      9229 GAC----A
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          14138 4 -     21137 GAC----A
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                    2243 4 +      9131 GAC----A
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                         2202 4 -      3730 GAC----A
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        30471 4 +     32220 GAC----A
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5944569 4 +   6242583 GAC----A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       13826 4 +     20839 GAC----A
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    3987 4 +     27266 gac----a
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tupaia_chinensis.KB320699.1                              2166694 4 +   4065304 GAC----A
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       3059 4 +     70247 GAC----A
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15741697 4 +  33153633 gac----a
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   57792 4 -     77625 tgg----a
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4853054 4 -   5085361 gac----a
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 14557 4 -     43706 gac----a
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          4501 4 +    224448 GAC----A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_1424488            330 4 -       542 gac----a
i Ziphius_cavirostris.ZipCav_flattened_line_1424488      C 0 I 18
e Cheracebus_torquatus.k141_1170026                          64344 81 +     76511 I
e Cheracebus_regulus.k141_471822                            159875 81 -    216457 I
e Cheracebus_lugens.k141_1393925                              2308 81 +     17877 I
e Cheracebus_lucifer.k141_49986                               2432 81 -     17098 I
e Plecturocebus_moloch.k141_1031110                          25240 158 -     89403 I
e Plecturocebus_miltoni.k141_349282                          27867 148 +     90634 I
e Plecturocebus_hoffmannsi.k141_3303950                      32394 156 +     67232 I
e Plecturocebus_grovesi.k141_2013005                         32198 160 +     60166 I
e Plecturocebus_dubius.k141_1058799                          25236 146 -     87928 I
e Plecturocebus_cupreus.k141_2351393                         11453 152 +     39403 I
e Plecturocebus_cinerascens.k141_1164729                     25783 136 +     88961 I
e Plecturocebus_caligatus.k141_1382851                       24956 158 +     87950 I
e Plecturocebus_brunneus.k141_1495506                        20694 156 +     34906 I
e Plecturocebus_bernhardi.k141_2549090                       11531 156 -     39866 I
e Echinops_telfairi.JH980293.1                            48781896 0 + 111700974 C
e Cebuella_niveiventris.k141_280505                          14658 0 +     15466 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1494 0 +      4343 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      17784 11 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vicugna_pacos.KN270157.1                                 5374276 47 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294973 0 +  10818551 C
e Tolypeutes_matacus.TolMat_scaffold_85600                    5751 1 +     18632 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192 0 -   1523678 C
e Sorex_araneus.JH798187.1                                13653314 9235 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    156307 109 -    313613 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15806 0 -     22811 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                       107181400 0 - 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12287 0 -     18566 C
e Ondatra_zibethicus.OndZib_scaffold_7387                      632 3336 +    140218 I
e Octodon_degus.JH651603.1                                  750513 17 +  11899542 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    24609 0 -    145209 C
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184766 1004 -  29670104 I
e Manis_pentadactyla.KN006162.1                              54034 31 -    317179 I
e Manis_javanica.JSZB01003497.1                              21892 31 +    737560 I
e Loxodonta_africana.GL010049.1                            4219685 0 -  43346337 C
e Lepus_americanus.LepAme_scaffold_107385                     5119 0 +     14121 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052 0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157 0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374 0 +     14092 C
e Hylobates_agilis.k141_232023                                2330 0 -     12752 C
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3353 0 +      7595 C
e Heterocephalus_glaber.JH602082.1                        20664195 469 +  22651954 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    43755 17 +     67921 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            70652 1 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    839213 0 +   1526836 C
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           4200 0 +     23735 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1260426 17 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            7648 1 -      8501 I
e Camelus_ferus.KB017975.1                                  405530 47 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2337232 47 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10004760 47 -  17673402 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      11958 18 +     62944 ACAGAA-C----CTTT---AG-----AG--C-T---G
s Acinonyx_jubatus.LLWD01001279.1                           835325 15 -   1699592 ---GAA-T----TTTT---AA-----TG--C-T---A
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     74767 17 +     87051 AC-AGA-A----TCTT---GT-----GG--C-T---G
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9513277 18 -  29979442 gcagAA-T----ATTT---AG-----TG--C-A---A
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             82181 18 -    347723 gcaaaa-t----attt---ag-----tg--c-t---a
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     76318 18 -     89534 GCAGAA-C----ATCT---AG-----TG--G-T---C
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   20202 18 -     52922 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         20124 18 -     28001 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                         10617 18 -     18505 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                          11489 18 -     12518 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             11809 18 +     51355 ACAGAA-T----CTTC---AG-----TG--C-T---G
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                4920 18 -     36483 ACAGAA-T----CTCT---AG-----TG--C-T---G
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              15368 18 +     28687 ACAGAA-T----CTTC---AG-----TG--C-T---G
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 3855 18 +     27940 acagAA-T----CTTC---AG-----TG--C-T---G
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            4929 18 -      9457 ACAGAA-T----CTTC---AG-----TG--C-T---G
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             3887 18 +     30492 ACAGAA-T----CTTC---AG-----TG--C-T---G
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              8108 18 +     47717 ACAGAA-T----CTCT---AG-----TG--C-T---G
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              4621 18 +      5663 acagAA-T----CTTC---AG-----TG--C-T---G
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             19078 18 +     50774 acagAA-T----CTTC---AG-----TG--C-T---G
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          680994 19 -   2318259 gcagAC-T----ATCT--CAG-----TG--C-T---T
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      188217 18 +    412891 GCAGAA-T----ATTT---AG-----TG--C-T---G
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 2
s Antilocapra_americana.AntAmePen_scaffold_43303              2261 19 -     32520 gcagAC-T----ATCCA--TG-----TG--T-T---T
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 C 0
s Aotus_azarae.k141_3104676                                  17674 18 -     33861 ACAGAA-T----CTTT---AG-----TG--C-T---G
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            17665 18 -     34016 ACAGAA-T----CTTT---AG-----TG--C-T---G
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4300088 18 -   5030052 acagAA-T----CTTT---AG-----TG--C-T---G
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             17703 18 -     34685 ACAGAA-T----CTTT---AG-----TG--C-T---G
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               30824 18 -     47192 ACAGAA-T----CTTT---AG-----TG--C-T---G
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      15988 18 +     20879 GCAGAA-T----ACTT---AG-----GG--T-T---A
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_1648548                         716 18 +      5281 ATGGAA-T----ACTT---AA-----TG--T-T---A
i Arctocebus_calabarensis.k141_1648548                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  7626 18 +     43469 GCAAAA-T----ATTT---AG-----TG--C-T---G
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 I 2
s Ateles_geoffroyi_b.tarseq_1536                             21212313 18 -  21539123 acagAA-T----CTTT---AG-----TG--C-T---G
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               47100 18 -     48001 acagAA-T----CTTT---AG-----TG--C-T---G
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 29905 18 -     30947 acagAA-T----CTTT---AG-----TG--C-T---G
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               11686 18 -     89868 acagAA-T----CTTT---AG-----TG--C-T---G
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              16074 18 -     40414 acagAA-T----CTTT---AG-----TG--C-T---G
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                23947 18 +     72325 acagAA-T----CTTT---AG-----TG--C-T---G
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15195334 18 +  23207421 gcagAA-T----ATCT---AG-----TG--C-T---C
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         5799 18 -     18090 gcagAA-T----ATCT---AG-----TG--C-T---C
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    32074 19 +     34529 GCAGAT-T----CTCTA--AG-----TG--C-T---T
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 C 0
s Bison_bison.KN261452.1                                    204709 19 -    288883 gcagGC-T----ATCTA--AG-----TG--C-T---T
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20277946 19 +  48749331 gcagGC-T----ATCTA--AG-----TG--C-T---N
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1130500 19 -   1948126 gcagGC-T----ATCTA--AG-----TG--C-T---T
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18088584 19 +  45695690 gcagGC-T----ATCTA--AG-----TG--C-T---C
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2824534 19 +   4408762 gcagAC-T----ATCTA--AG-----TG--C-T---T
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                104963 18 -    122966 acagaa-t----cttt---ag-----tg--c-T---G
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   64456 18 +     81800 ACAGAA-T----CTTT---AG-----TG--C-T---G
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  33648 18 -     95584 acagaa-t----CTTT---AG-----TG--C-T---G
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         57744 18 -    119600 acagAA-T----CTTT---AG-----TG--C-T---G
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_10318                               1369 18 +     27907 ACAGAA-T----CTTC---AG-----TG--C-T---G
i Callibella_humilis.k141_10318                          C 0 C 0
s Callimico_goeldii.k141_737284                               1015 18 -     31217 ACAGAA-T----CTTC---AG-----TG--C-T---G
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                             1311 18 +      5377 ACAGCA-T----CTTC---AG-----TG--C-T---G
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23593162 18 - 189096842 ACAGAA-T----CTTC---AG-----TG--C-T---G
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              1988 18 -     12329 ACAGAA-T----CTTC---AG-----TG--C-T---G
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s CanFam4.chr16                                           17802946 19 -  60362399 gcagaaat----actt---ag-----tg--c-t---a
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     3692 19 -     43241 gcagaaat----actt---ag-----tg--c-t---a
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9038387 19 -   9314153 gcagaaat----actt---ag-----tg--c-t---a
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17962863 19 -  59632846 gcagaaat----actt---ag-----tg--c-t---a
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18504160 19 +  63665305 gcagaaat----actt---ag-----tg--c-t---a
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18835019 19 +  46296322 gcagAC-T----ATCT--CAG-----TG--C-T---T
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18065820 19 -  44709034 gcagAC-T----ATCT--CAG-----TG--C-T---T
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_65020                    3705 18 -     12242 AAAGAT-T----ATTC---TG-----TG--T-T---A
i Capromys_pilorides.CapPil_scaffold_65020               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           158932 18 -    496798 ACAGAC-C----ATGT---AG-----TG--T-T---A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                7969 18 -     11696 GCAGAA-C----ATTT---AG-----TG--C-T---G
i Carollia_perspicillata.CarPer_scaffold_92756           C 0 I 2
s Castor_canadensis.CasCan_scaffold_2074                    140406 18 +    179628 ACAAAA-C----ATTT---AC-----CA--C-T---C
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     97467 18 +    217609 gcagAA-A----ATCT---AG-----CG--C-T---A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18352281 18 -  23392119 ACAGAC-T----GTTC---AG-----TG--T-T---G
i Cavia_aperea.AVPZ01000300.1                            C 0 I 5
s Cavia_porcellus.DS562891.1                              18364541 18 -  23407841 ACAGAC-T----GTTC---AG-----TG--T-T---G
i Cavia_porcellus.DS562891.1                             C 0 I 5
s Cavia_tschudii.CavTsc_scaffold_8919                       103423 18 +    143979 ACAGAC-T----GTTC---AG-----TG--T-T---G
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 I 5
s Cebuella_pygmaea.k141_793006                                1010 18 -     15088 ACAGAA-T----CTCC---AG-----TG--C-T---G
i Cebuella_pygmaea.k141_793006                           C 0 C 0
s Cebus_albifrons.Contig27                                25654490 18 +  26074798 acagAA-T----CTTT---AG-----TG--C-T---G
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                2434 18 +     28840 ACAGAA-T----CTTT---AG-----TG--C-T---G
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 2155 18 +     14051 ACAGAA-T----CTTT---AG-----TG--C-T---G
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         8736 18 +     31688 acagAC-C----ATGT---AG-----TG--C-T---A
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12235012 18 +  27778364 gcagaa-t----attt---ag-----tg--c-c---a
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           6035 18 -     25243 gcagaa-t----attt---ag-----tg--c-c---a
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4481137 18 +   4669795 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        5650 18 +     17872 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           6238 18 -     14043 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          14331 18 +     27781 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        14486 18 -     20310 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          17463 18 +     29689 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           12224 18 -     20078 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          20136 18 -     27936 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            9015 18 -     17152 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38828738 18 +  39242232 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21228253 18 -  21565898 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       45357 18 -     53127 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        5612 18 +     13442 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       20158 18 -     27947 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         3184 18 +     10558 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          6199 18 +     14005 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chiropotes_albinasus.k141_2206961                           3100 13 -     15524 ACGGAA-T----CTTC---AG----------------
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chiropotes_israelita.k141_747660                          102073 18 +    146308 acagAA-T----CTTT---AG-----TG--C-T---G
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          33892 18 -     50570 acagAA-T----CTTT---AG-----TG--C-T---G
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18434064 18 -  18827391 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       20559 18 -     50209 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135427565 18 + 135778131 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1916100 18 +   2368649 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199954341 18 + 200372422 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              42650 18 +     84244 ACAGAA-C----CTTC---AG-----TG--C-T---G
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17552971 18 -  53390261 gcagac-t----attt---ag-----ag--c-t---a
i Condylura_cristata.JH655891.1                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 54245 17 +     63868 GC-AGG-T----GCTT---AT-----GG--C-T---A
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11669768 17 + 224834208 AC-AGA-T----GCTT---AT-----GG--C-T---T
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               7022 23 -     19598 GCAGAG-T----ATTT---AGAAAAATA--C-T---A
i Crocidura_indochinensis.CroInd_scaffold_37019          C 0 I 9
s Cryptoprocta_ferox.CryFer_flattened_line_16129             31877 15 -     87169 ---gag-c----attt---ag-----tg--c-t---g
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  38625 18 +     51376 ACAGAT-T----ATTC---AG-----TG--T-T---G
i Ctenomys_sociabilis.CteSoc_scaffold_29687              C 0 I 5
s Dasyprocta_punctata.DasPun_flattened_line_15900             3254 18 -     75252 ACAGAC-T----ATTC---AG-----TA--C-T---G
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 5
s Delphinapterus_leucas.KZ290073.1                        16815209 18 +  35494412 gcagAA-T----ATCT---AG-----TG--C-T---A
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8632974 18 +  20541912 GCAGAA-T----ATTT---AG-----TG--C-C---G
i Desmodus_rotundus.KZ672289.1                           C 0 I 2
s Dicerorhinus_sumatrensis.PEKH010002091.1                  676854 18 +   1390856 gcagaa-t----attt---ag-----tg--c-c---a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    9614 18 +    198055 gcagaa-t----attt---ag-----tg--c-c---a
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 35975 18 -     42551 ACAGAC-T----ATTC---AG-----TG--T-T---G
i Dolichotis_patagonum.DolPat_scaffold_30833             C 0 I 5
s Eidolon_helvum.KE797349.1                                   1096 18 -     31197 gcagaa-t----attt---ag-----tg--a-t---a
i Eidolon_helvum.KE797349.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       315476 14 +    607251 gcagAC-T----ATCTA--AG----------------
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          25128 17 -    110024 AT-AGA-T----ACTT---GT-----GA--T-T---G
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                            5058 17 +      8657 AT-AGA-T----ACTT---GT-----GA--T-T---G
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16339394 18 -  41312741 gtagaa-t----attt---ag-----ta--c-t---c
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2151483 18 -  14770903 GCAGAA-T----ATTT---AG-----TT--C-C---A
i Eptesicus_fuscus.JH977646.1                            C 0 I 2
s Equus_asinus.JREZ01000139.1                              1287148 18 +   4378816 gcagaa-t----attt---ag-----tg--c-t---a
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18534956 18 -  39960074 gcagaa-t----attt---ag-----tg--c-t---a
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               36985 18 +    498745 gcagaa-t----attt---ag-----tg--c-t---a
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21210734 18 -  21539334 GCAGAA-C----CTTT---AG-----TG--C-T---G
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           14632 18 +    133382 gcagAA-T----ATCT---AG-----TG--c-t---c
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             28578 18 -     44125 gcagAA-T----ATCT---AG-----TG--c-t---c
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20240457 15 + 206538554 ---gaa-t----tttt---aa-----tg--c-t---a
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20199328 15 + 205367284 ---GAA-T----TTTT---AA-----TG--C-T---A
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 12989 15 -     36744 ---GAA-T----TTTT---AA-----TG--C-T---A
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             853064 18 +   3816255 ATAGAC-T----ATTC---AG-----TG--C-T---G
i Fukomys_damarensis.KN121974.1                          C 0 I 5
s Galago_moholi.ctg2040                                     429915 18 -    453645 ATGGAA-T----ACTT---AA-----TG--T-T---A
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             7609 18 +     11339 ATGGAA-T----ACTT---AA-----TG--T-T---A
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            4864 18 +     41679 ATGGAA-T----ACTT---AA-----TG--T-T---A
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               6209 18 -      9135 ACAGAA-T----ATTT---AG-----TG--C-T---C
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     612726  7 -    660261 -------------------AG-----TG--T-T---T
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 8 C 0
s Glis_glis.GliGli_scaffold_19807                            35811 18 +     49224 acaaaa-t----atat---ag-----gg--c-t---a
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              21170 18 -     32273 ACAGAA-C----CTTT---AG-----AG--C-T---G
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186343286 18 + 186649187 ACAGAA-C----CTTT---AG-----AG--C-T---G
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   37434 18 +     78134 acaaaa-t----attt---ag-----gg--c-t---a
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               245692 15 +    327341 ---gag-t----cgtt---ag-----tg--c-t---a
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 23313 19 +     36099 gcagAC-T----ATCT--CAG-----TG--C-T---T
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_9076               114054 18 +    128679 gcagAA-T----ATCT---AG-----TG--C-T---A
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       113888 18 +   1711038 acagaA-T----CTTT---AG-----TG--C-T---G
i Hipposideros_armiger.JXIK01000431.1                    I 2 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188               2440 18 +      9903 acagaa-t----cttt---ag-----tg--c-t---g
i Hipposideros_galeritus.HipGal_scaffold_101188          I 2 C 0
s Hoolock_leuconedys.ctg274                                    440420 18 +    630532 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  48639 15 +     55795 ---GAG-T----ATTT---AG-----TG--C-T---A
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            27372 18 -    143317 acagac-c----attc---ag-----tg--c-t---g
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      85536 18 +    135385 ACAGAC-T----ATTC---AG-----TG--T-T---G
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 194
s Ictidomys_tridecemlineatus.JH393364.1                    7525577 17 -   7955117 GCAGGA-T----ACTT----G-----GG--C-T---G
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                2416 18 -     31341 gcagAA-T----ATCT---AG-----TG--C-T---A
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8279051 18 -   9596543 GCAGAA-T----AACT---AG-----TG--G-T---G
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                 2155 18 -     18011 gcagAA-T----ATCT---AG-----TG--C-T---A
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         18133 18 -     38430 acagAA-T----CTTT---AG-----TG--C-T---G
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_50988                    19734 18 +     29960 gcagAA-T----ATCT---AG-----TT--C-C---A
i Lasiurus_borealis.LasBor_scaffold_50988                I 197 I 224
s Leontocebus_fuscicollis.k141_1820339                       10167 12 +     64341 ATGGAA-T----CTTC---A-----------------
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           2508 12 -     35062 ATGGAA-T----CTTC---A-----------------
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                       10354 12 +     35603 ATGGAA-T----CTTC---A-----------------
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    31410 18 +     38576 ACGGAA-T----CTTC---AG-----TG--C-T---G
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         28114 18 +     66356 ACGGAA-T----CTTC---AG-----TG--C-T---G
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3059331 18 +   3914936 gcagaa-t----attt---ag-----tg--c-t---a
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             271687 18 -    662738 gcagAA-T----ATCT---AG-----Tg--c-t---a
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1442692 18 +   1826925 ACAGAA-C----CTTT---AA-----TG--C-T---G
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_399337                            17918 18 -     33856 ATGGAA-T----GCTT---AA-----TG--T-T---A
i Loris_lydekkerianus.k141_399337                        C 0 C 0
s Loris_tardigradus.ctg83                                  1015629 18 +   6120653 ATGGAA-T----ACTT---AA-----TG--T-T---A
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17959103 19 -  59628241 gcagaaat----actt---ag-----tg--c-t---a
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                              12499 18 +     40492 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59681746 18 +  60120075 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 18297 18 -     26193 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            86072 18 -    114318 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 11761 18 -     23192 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                21226 18 -     29190 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  29811 18 +     37952 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186844878 18 + 187317192 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25463459 18 -  25927173 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  85663 18 +     89720 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                12675 18 +     20474 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  12449 18 -     14993 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  335312 18 -    668171 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                10736 18 -     24072 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               31382 18 -     45290 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                  6133 18 +    270270 gcagaa-t----attt---ag-----tg--a-t---g
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23942967 18 -  24302211 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               357069 18 +    752769 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33106667  6 -  40650429 --------------------G-----GG--C-T---G
i Marmota_marmota.CZRN01000018.1                         I 7 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        16747 20 -    207569 GCAGCA-C----ATTT---AG-----GGCCA-T---G
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 3
s Mellivora_capensis.MelCap_flattened_line_69365             12976 18 +     13704 gtagaa-t----attt---ag-----ta--c-t---a
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 37711 17 +    140813 AC-AGA-T----GCTT---AT-----GG--T-T---G
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    6845 18 +     10310 gcagAA-T----ATCT---AG-----TG--C-T---A
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Mico_argentatus.k141_1024458                                1017 18 -     20047 ACAGAA-T----CTTC---AG-----TG--C-T---G
i Mico_argentatus.k141_1024458                           C 0 C 0
s Mico_humeralifer.k141_700707                                  54 18 +      5224 ACAGAA-T----CTTC---AG-----TG--C-T---G
i Mico_humeralifer.k141_700707                           C 0 C 0
s Mico_schneideri.k141_916733                                       1017 18 +      5107 ACAGAA-T----CTTC---AG-----TG--C-T---G
i Mico_schneideri.k141_916733                                  C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                18932 18 -     19307 GCAGAA-T----ATTG---AG-----TG--C-C---A
i Micronycteris_hirsuta.MicHir_scaffold_52381            C 0 I 2
s Miniopterus_natalensis.LDJU01000034.1                    1854009 18 +   8254450 GCAGAA-T----ATTT---AG-----TG--C-A---G
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 2
s Miniopterus_schreibersii.MinSch_scaffold_18080             37687 18 +     64694 gcagAA-T----ATTT---AG-----TG--C-A---G
i Miniopterus_schreibersii.MinSch_scaffold_18080         C 0 I 2
s Miopithecus_ogouensis.k141_534055                          14637 18 -     28506 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_55178          500 18 +     26817 gcagaa-t----attt---ag-----tg--c-t---a
i Mirounga_angustirostris.MirAng_flattened_line_55178    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    30593 18 -    437263 gcagAA-T----ATCT---AG-----TG--C-T---A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 144601 18 -    366855 gcagaa-t----attt---ag-----tg--c-T---A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 2
s Moschus_moschiferus.MosMos_scaffold_13123                   4900 19 +     82753 gcagAC-T----ATCTA--AG-----TG--T-T---T
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_40893                     695 15 +      5729 ---GAG-T----CTTT---AG-----TG--C-T---A
i Mungos_mungo.MunMun_flattened_line_40893               C 0 C 0
s Murina_feae.MurFea_scaffold_85699                          11266 18 +     14753 GCAGAA-A----ATTT---AG-----TT--C-C---A
i Murina_feae.MurFea_scaffold_85699                      C 0 I 2
s Mus_caroli.LT608237.1                                   84365293 17 - 120012414 GC-AGA-T----GCTT---AA-----GG--C-T---G
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87654697 17 - 129401213 GC-AGA-T----GCTT---AA-----GG--C-T---G
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31359603 20 -  89631738 gc-AGA-T----GCTT---AA-----GG--C-AGATG
i Mus_pahari.LT608297.1                                  I 203 C 0
s Mus_spretus.CM004101.1                                  90757484 17 - 130317789 GC-AGA-T----GCTT---AA-----GG--C-T---G
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              9279 18 +     14296 ATTAGA-T----ATTT---AG-----TA--T-A---A
i Muscardinus_avellanarius.MusAve_scaffold_82313         C 0 I 1
s Mustela_putorius.JH418006.1                               304474 18 -  14710649 GTAGAA-T----ATTT---AG-----TA--C-T---C
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     73882 18 -     80779 agagat-t----aTTC---TG-----GG--T-T---G
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 C 0
s Myotis_brandtii.KE162005.1                                284751 18 -  10118263 GCAGAA-T----ATTT---AG-----TT--C-C---A
i Myotis_brandtii.KE162005.1                             C 0 I 2
s Myotis_davidii.KB100139.1                                1592069 18 -   6019432 GCAGAA-T----ATTT---AG-----TT--C-C---A
i Myotis_davidii.KB100139.1                              C 0 I 2
s Myotis_lucifugus.GL429869.1                              3908169 18 -   4330536 gcagAA-T----ATTC---AG-----TT--C-C---A
i Myotis_lucifugus.GL429869.1                            C 0 I 2
s Myotis_myotis.MyoMyo_scaffold_44643                         2721 18 +     25416 GCAGGA-T----ATTT---AG-----TT--C-C---A
i Myotis_myotis.MyoMyo_scaffold_44643                    C 0 I 2
s Nannospalax_galili.KL204047.1                            2040243 18 -   3037898 acagAA-T----ATTT---AG-----GG--C-C---G
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               20709 18 +     21681 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20310271 18 +  31847680 gcagaa-t----attt---ag-----tg--c-t---a
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5869558 18 +   7148211 gcagAA-T----ATCT---AG-----TG--C-T---A
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    760833  9 +    783361 --------------at---ag-----cg--c-t---G
i Noctilio_leporinus.NocLep_scaffold_251                 I 6 I 2
s Nyctereutes_procyonoides.CAJHUB010000658.1               9153020 18 -   9404916 gcagaa-t----actt---ag-----tg--c-t---a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102596133 18 - 196305487 ATGGAA-T----ACTT---AA-----TG--T-T---A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1514628                             1600 18 -      5837 ATGGAA-T----ACTT---AA-----TG--T-T---A
i Nycticebus_coucang.k141_1514628                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105772055 18 + 199412804 ATGGAA-T----ACTT---AA-----TG--T-T---A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1368292 18 +   3988456 ATAGAG-C----ATTT---CT-----TC--A-T---A
i Ochotona_princeps.JH802162.1                           C 0 I 4
s Odobenus_rosmarus.KB229312.1                              509096 18 -   2017862 gcagaa-t----actt---ag-----tg--c-t---a
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         148276 19 +    630418 gcagAC-T----ATCTA--AG-----TG--T-T---T
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          82672  7 -    150152 -------------------AG-----TG--T-T---T
i Okapia_johnstoni.LVCL01S0005463.1                      I 8 C 0
s Onychomys_torridus.OnyTor_scaffold_2986                    84578 20 +    102263 AC-AGA-T----GTTTATTAT-----GG--C-T---G
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2785449 18 -  10937097 gcagAA-T----ATCT---AG-----TG--C-T---A
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       466445 18 -    559221 gcagaa-t----actt---ag-----tg--c-t---a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_222918                         7390 18 +      8798 ATGGAA-T----ACTT---AA-----TG--T-T---A
i Otolemur_crassicaudatus.k141_222918                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             699629 18 -   1103335 ATGGAA-T----ACTT---AA-----TG--T-T---A
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   17591111 19 +  44047080 GCAGAC-T----ATCT--CAG-----TG--C-T---T
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_2572                      179263 19 -    191736 GCAGAC-T----ATCT--CAG-----TG--C-T---T
i Ovis_canadensis.OviCan_scaffold_2572                   C 0 C 0
s Pan_paniscus.KQ411613.1                                    49272 18 +     80009 ACAGAA-C----CTTT---AG-----AG--C-T---G
i Pan_paniscus.KQ411613.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             189148142 18 + 189151597 ACAGAA-C----CTTT---AG-----AG--C-T---G
i Pan_troglodytes.CM009242.2                             C 0 I 21
s Panthera_onca.PanOnc_flattened_line_3271                  154511 15 +    230217 ---gag-t----attt---aa-----tg--c-t---a
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                267827 15 +  18783137 ---GAG-T----ATTT---AA-----TG--C-T---A
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4724647 15 -   8748460 ---gaa-t----aTTT---AA-----TG--C-T---A
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1269993 19 -   2937107 gcagAC-T----ATCTA--AG-----TG--C-T---T
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183448910 23 + 183742232 ACAGAA-CGCGGTTTC---AA-----TG--CCT---G
i Papio_anubis.CM001495.2                                I 1 C 0
s Papio_cynocephalus.k141_4307930                            12414 18 +     20448 ACAGAA-C----CTTT---AA-----TG--C-T---G
i Papio_cynocephalus.k141_4307930                        C 0 C 0
s Papio_hamadryas.Contig39                                20569229 18 +  20919399 ACAGAA-C----CTTT---AA-----TG--C-T---G
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                  11176 18 +     41871 ACAGAA-C----CTTT---AA-----TG--C-T---G
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_802527                                    14455 18 +     27711 ACAGAA-C----CTTT---AA-----TG--C-T---G
i Papio_papio.k141_802527                                C 0 C 0
s Papio_ursinus.k141_5274964                                  5436 18 -     11374 ACAGAA-C----CTTT---AA-----TG--C-T---G
i Papio_ursinus.k141_5274964                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15908 15 -     78924 ---gaa-t----attt---ag-----tg--c-t---a
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1182643                            396 18 -      3244 ATGGAA-T----ACTT---AA-----TG--T-T---A
i Perodicticus_ibeanus.k141_1182643                      C 0 C 0
s Perodicticus_potto.k141_1186926                              775 18 +     10374 ATGGAA-T----ACTT---AA-----TG--T-T---A
i Perodicticus_potto.k141_1186926                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18215285 20 -  18517816 AC-AGA-T----GCTTATTAT-----GG--C-T---G
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_221660                     1595 18 -      2102 ATAGAC-C----ATTT---AG-----TG--C-T---G
i Petromus_typicus.PetTyp_scaffold_221660                C 0 I 5
s Phocoena_phocoena.PhoPho_flattened_line_24159              12520 18 +     63832 gcagAA-T----ATCT---AG-----TG--C-T---A
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_1142974                            3809 18 +     68526 ATAGAA-C----CTTT---AG-----TG--C-T---G
i Piliocolobus_badius.k141_1142974                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        43944 18 +     89929 ATAGAA-C----CTTT---AG-----TG--C-T---G
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_448987                            45360 18 +     51399 ATAGAA-C----CTTT---AG-----TG--C-T---G
i Piliocolobus_kirkii.k141_448987                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14301596 18 -  14605196 ATAGAA-C----CTTT---AG-----TG--C-T---G
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46187             6045 18 +     22620 GCAGAA-T----ATTT---AG-----TT--C-C---A
i Pipistrellus_pipistrellus.PipPip_scaffold_46187        C 0 I 2
s Pithecia_albicans.k141_1476471                              7369 18 +     26961 ACAGAA-T----CTTT---AG-----TG--C-T---G
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                          3490 18 +     23417 acagAA-T----CTTT---AG-----TG--C-T---G
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                                7353 18 +     29694 ACAGAA-T----CTTT---AG-----TG--C-T---G
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          32391 18 +     52772 acagaa-t----ctTT---AG-----TG--C-T---G
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                           7379 18 +     26198 acagAA-T----CTTT---AG-----TG--C-T---G
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3943906 18 +   4542175 ACAGAA-T----CTTT---AG-----TG--C-T---G
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                            7349 18 -     23490 acagAA-T----CTTT---AG-----TG--C-T---G
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_173610           2056 18 +      7680 gcagAA-T----ATCT---AA-----TG--C-T---A
i Platanista_gangetica.PlaMin_flattened_line_173610      C 0 C 0
s Pongo_abelii.CM009266.2                                189136752 18 + 189387572 ACAGAA-C----CTTT---AG-----AG--C-T---G
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9576362 18 +   9816681 ACAGAA-C----CTTT---AG-----AG--C-T---G
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_677006                               78890 18 -     81375 ACAGAA-C----CTTC---AG-----TG--C-T---G
i Presbytis_comata.k141_677006                           C 0 C 0
s Presbytis_mitrata.k141_1087752                             10726 18 +     19060 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Presbytis_mitrata.k141_1087752                         C 0 C 0
s Psammomys_obesus.NESX01036370.1                            15317 17 -     21651 AC-AGA-T----GCTT---AT-----GG--T-C---G
i Psammomys_obesus.NESX01036370.1                        C 0 C 0
s Pteronotus_parnellii.KE909381.1                            18153 18 -     21811 acagAA-T----ATTT---AG-----TG--C-T---G
i Pteronotus_parnellii.KE909381.1                        C 0 I 2
s Pteronura_brasiliensis.PteBra_flattened_line_76658          1331 18 -      3818 gtagaa-t----attt---ag-----ta--c-t---c
i Pteronura_brasiliensis.PteBra_flattened_line_76658     C 0 C 0
s Pteropus_alecto.KB030862.1                              22987543 18 +  28871421 gcagaa-t----attt---ag-----tg--a-t---a
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1371103 18 +   4952924 gcagaa-t----attt---ag-----tg--a-t---a
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20277717 15 -  38429054 ---gaa-t----attt---aa-----tg--c-t---a
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             20703 18 -     91421 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7614828 18 +   7812017 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             20733 18 -     72585 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                 10112 19 +     55207 gcagAC-T----ATCTA--AG-----TG--T-T---T
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53574721 17 +  90668790 GC-AGA-T----GCTT---AT-----GG--C-C---A
i Rattus_norvegicus.chr16                                I 1 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        370318 18 -   3329780 acagaa-t----ATTT---AG-----TG--C-T---G
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_1041714                            1296 18 +      5697 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Rhinopithecus_bieti.k119_1041714                       C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91241769 18 - 195417433 ACAGAA-A----CTTT---AG-----TG--C-T---G
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7677418 18 +   7961872 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_121563                 376 18 +      1157 acagaa-t----attt---ag-----tg--a-t---a
i Rousettus_aegyptiacus.RouAeg_scaffold_121563           C 0 C 0
s Saguinus_bicolor.k141_8081                                  3675 12 +     42994 ACGGAA-T----CTTC---A-----------------
i Saguinus_bicolor.k141_8081                             C 0 C 0
s Saguinus_imperator.k141_228412                               195 12 +      6556 ATGGAA-T----CTTC---A-----------------
i Saguinus_imperator.k141_228412                         C 0 C 0
s Saguinus_inustus.k141_3945547                               2767 12 -      8737 ATGAAA-T----CTTC---A-----------------
i Saguinus_inustus.k141_3945547                          C 0 C 0
s Saguinus_labiatus.k141_3085223                               608 12 +      6551 ATGAAA-T----CTTC---A-----------------
i Saguinus_labiatus.k141_3085223                         C 0 C 0
s Saguinus_midas.LG03                                    209477055 12 + 209938924 ACGGAA-T----CTTC---A-----------------
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_4699220                                1579 12 -      7576 ACGGAA-T----CTTC---A-----------------
i Saguinus_mystax.k141_4699220                           C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_133311                       2570 19 +      9503 gcagAC-T----GTCTA--AG-----TG--C-T---C
i Saiga_tatarica.SaiTat_scaffold_133311                  C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119952766 18 - 121099817 ACAGAA-T----CTTT---AG-----TT--C-T---G
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       25102 18 +     46362 ACAGAA-T----CTTT---AG-----TT--C-T---G
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               25199 18 +     45824 ACAGAA-T----CTTT---AG-----TT--C-T---G
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             41865 18 -     64574 ACAGAA-T----CTTT---AG-----TT--C-T---G
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                               4939 18 -     23631 ACAGAA-T----CTTT---AG-----TT--C-T---G
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 25093 18 -     61129 ACAGAA-T----CTTT---AG-----TT--C-T---G
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5422458 18 -   5703754 ACAGAA-T----CTTT---AG-----TG--C-T---G
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          57697 18 -     80660 ACAGAA-T----CTTT---AG-----TG--C-T---G
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Semnopithecus_entellus.k141_1672505                         5562 18 -     12572 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Semnopithecus_entellus.k141_1672505                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1615806                      32415 18 +     39453 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Semnopithecus_hypoleucos.k141_1615806                  C 0 C 0
s Semnopithecus_johnii.k141_670120                           12919 18 +     27826 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Semnopithecus_johnii.k141_670120                       C 0 C 0
s Semnopithecus_priam.k141_638794                            12465 18 -     19483 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Semnopithecus_priam.k141_638794                        C 0 C 0
s Semnopithecus_schistaceus.k141_1572284                      5761 18 -     12762 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Semnopithecus_schistaceus.k141_1572284                 C 0 C 0
s Semnopithecus_vetulus.k141_910252                           5604 18 +     13763 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Semnopithecus_vetulus.k141_910252                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_42075                     4542 17 -     30804 AC-AGA-T----ACTT---AT-----GA--C-T---A
i Sigmodon_hispidus.SigHis_scaffold_42075                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126               5246 18 +   1910179 GCAGAG-A----ATTT---AG-----TG--C-T---A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1957461 17 -   3870691 GCAGGA-T----ACTT----G-----GG--C-T---G
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             33398 18 +     97271 gcaaaa-t----attt---ag-----tg--c-t---a
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              21962 15 -    196729 ---gag-t----cttt---ag-----tg--c-t---a
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6815066 18 +  69701581 gcagAA-T----ATCT---AG-----TG--C-T---A
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                14797 16 +     41958 --AGAA-T----ATTT---AG-----TG--T-T---G
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 I 2
s Tapirus_indicus.TapInd_scaffold_9301                      122328 18 -    156842 gcagaa-t----attt---ag-----tg--t-c---a
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    390809 18 +    539355 gcagaa-t----attt---ag-----tg--t-c---a
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               29427 18 +     70052 ACAGAC-T----ATTC---AG-----TG--C-T---G
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_254427                                4227 18 -     16117 ACAGAC-T----ATTC---AT-----TG--C-T---G
i Tarsius_wallacei.k141_254427                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186434086 18 + 186847797 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_1223              108134 17 +    114563 ATAGAC-T----ATTT---A------TG--C-T---G
i Thryonomys_swinderianus.ThrSwi_scaffold_1223           C 0 I 5
s Tonatia_saurophila.TonSau_scaffold_294                     84072 17 +    610378 G-AGAA-T----ACTT---AG-----TG--C-T---G
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 2
s Trachypithecus_auratus.k141_722599                         16501 18 -     20410 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Trachypithecus_auratus.k141_722599                     C 0 C 0
s Trachypithecus_crepusculus.k141_582567                      5621 18 -     12674 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Trachypithecus_crepusculus.k141_582567                 C 0 C 0
s Trachypithecus_cristatus.k141_580354                       16609 18 +     19930 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Trachypithecus_cristatus.k141_580354                   C 0 C 0
s Trachypithecus_francoisi.k141_1412647                      13009 18 -     19997 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Trachypithecus_francoisi.k141_1412647                  C 0 C 0
s Trachypithecus_geei.k141_277701                            53152 18 -     60166 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Trachypithecus_geei.k141_277701                        C 0 C 0
s Trachypithecus_germaini.k141_912491                        20615 18 -     27529 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Trachypithecus_germaini.k141_912491                    C 0 C 0
s Trachypithecus_hatinhensis.k141_17719                       2243 18 +      9229 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Trachypithecus_hatinhensis.k141_17719                  C 0 C 0
s Trachypithecus_laotum.k141_907409                          14142 18 -     21137 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Trachypithecus_laotum.k141_907409                      C 0 C 0
s Trachypithecus_leucocephalus.k141_101510                    2247 18 +      9131 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Trachypithecus_leucocephalus.k141_101510               C 0 C 0
s Trachypithecus_melamera.k141_105182                         2206 18 -      3730 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Trachypithecus_melamera.k141_105182                    C 0 C 0
s Trachypithecus_obscurus.k141_190785                        30475 18 +     32220 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Trachypithecus_obscurus.k141_190785                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5944573 18 +   6242583 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2007326                       13830 18 +     20839 ACAGAA-C----CTTT---AG-----TG--C-T---G
i Trachypithecus_pileatus.k141_2007326                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_40725                    3991 19 +     27266 gctgaa-t----atct--agc-----gt--t-a---a
i Tragulus_javanicus.TraJav_scaffold_40725               C 0 C 0
s Tupaia_chinensis.KB320699.1                              2166698 18 +   4065304 ACAGAA-T----ATTT---AG-----TG--T-T---A
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       3063 18 +     70247 ACAGAA-T----ATTT---AG-----TG--T-T---A
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15741701 18 +  33153633 gcagAA-T----ATCT---AG-----TG--C-T---A
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_12083                   57796 18 -     77625 gcagAC-T----TTTT---AG-----TG--C-T---A
i Uropsilus_gracilis.UroGra_scaffold_12083               C 0 C 0
s Ursus_maritimus.KK499267.1                               4853058 18 -   5085361 gcagAA-T----ATTT---AG-----TG--C-A---A
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 14561 18 -     43706 gcagaa-t----actt---ag-----tg--c-t---a
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                          4505 18 +    224448 GCAGGC-T----ACTT---AG-----AG--T-T---G
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_1389144            334 18 +       557 gcagAA-T----ATCT---AG-----TG--C-T---A
i Ziphius_cavirostris.ZipCav_flattened_line_1389144      I 125 n 18
e Cheracebus_torquatus.k141_1170026                          64344 81 +     76511 I
e Cheracebus_regulus.k141_471822                            159875 81 -    216457 I
e Cheracebus_lugens.k141_1393925                              2308 81 +     17877 I
e Cheracebus_lucifer.k141_49986                               2432 81 -     17098 I
e Plecturocebus_moloch.k141_1031110                          25240 158 -     89403 I
e Plecturocebus_miltoni.k141_349282                          27867 148 +     90634 I
e Plecturocebus_hoffmannsi.k141_3303950                      32394 156 +     67232 I
e Plecturocebus_grovesi.k141_2013005                         32198 160 +     60166 I
e Plecturocebus_dubius.k141_1058799                          25236 146 -     87928 I
e Plecturocebus_cupreus.k141_2351393                         11453 152 +     39403 I
e Plecturocebus_cinerascens.k141_1164729                     25783 136 +     88961 I
e Plecturocebus_caligatus.k141_1382851                       24956 158 +     87950 I
e Plecturocebus_brunneus.k141_1495506                        20694 156 +     34906 I
e Plecturocebus_bernhardi.k141_2549090                       11531 156 -     39866 I
e Echinops_telfairi.JH980293.1                            48781896  0 + 111700974 C
e Cebuella_niveiventris.k141_280505                          14658  0 +     15466 C
e Chrysochloris_asiatica.ChrAsi_scaffold_484642               1494  0 +      4343 C
e Zapus_hudsonius.ZapHud_scaffold_11398                      17784 11 +     63895 I
e Zalophus_californianus.ZalCal_flattened_line_17732          5740 1826 +     86975 I
e Vicugna_pacos.KN270157.1                                 5374276 47 -   5488506 I
e Varecia_variegata.k141_1128296                             12542 1793 +     24756 I
e Varecia_rubra.k141_590885                                  12483 1793 +     50397 I
e Trichechus_manatus.JH594705.1                            4294973  0 +  10818551 C
e Tolypeutes_matacus.TolMat_scaffold_85600                    5751  1 +     18632 I
e Tamandua_tetradactyla.TamTet_scaffold_1782                 73989 2010 +    116680 I
e Symphalangus_syndactylus.tarseq_199                      1093192  0 -   1523678 C
e Sorex_araneus.JH798187.1                                13653314 9235 -  18376816 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    156307 109 -    313613 I
e Propithecus_tattersalli.k141_790011                        29649 1814 -     67325 I
e Propithecus_perrieri.k141_1200571                           5824 1811 -     24134 I
e Propithecus_edwardsi.k141_1176054                          27637 1810 +     35766 I
e Propithecus_diadema.k141_58108                              2158 1810 -     13098 I
e Propithecus_coronatus.k141_347390                          30116 1815 +     38485 I
e Propithecus_coquerelli.NW_012148875.1                     991804 1814 +   2598838 I
e Prolemur_simus.MPIZ01000396.1                            2597824 1795 -   4620579 I
e Procavia_capensis.ProCapCap_scaffold_85530                 15806  0 -     22811 C
e Perognathus_longimembris.PerPac_flattened_line_34437       25690 60 +     32600 I
e Oryctolagus_cuniculus.CM000791.1                       107181400  0 - 174332312 I
e Orycteropus_afer.OryAfe_flattened_line_144387              12287  0 -     18566 C
e Ondatra_zibethicus.OndZib_scaffold_7387                      632 3336 +    140218 I
e Octodon_degus.JH651603.1                                  750513 17 +  11899542 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_1081              190604 2005 +    196477 I
e Mirza_zaza.k141_952172                                     10131 1990 -     37649 I
e Microtus_ochrogaster.CM001695.1                         11262877 588 -  27267610 I
e Microgale_talazaci.MicTal_scaffold_6613                    24609  0 -    145209 C
e Microcebus_murinus.CM007674.1                           18292588 1971 -  93316391 I
e Mesocricetus_auratus.KB708134.1                         12184766 1004 -  29670104 I
e Manis_pentadactyla.KN006162.1                              54034 31 -    317179 I
e Manis_javanica.JSZB01003497.1                              21892 31 +    737560 I
e Loxodonta_africana.GL010049.1                            4219685  0 -  43346337 C
e Lepus_americanus.LepAme_scaffold_107385                     5119  0 +     14121 I
e Lepilemur_septentrionalis.k141_185316                      28013 758 +     54090 I
e Lepilemur_ruficaudatus.k141_121139                          2618 750 +     25010 I
e Lepilemur_dorsalis.k141_577674                             30073 753 +     45836 I
e Lepilemur_ankaranensis.k141_596936                         12019 758 -     23766 I
e Lemur_catta.scaffold_24                                 15525144 1795 -  30322482 I
e Indri_indri.k141_3655594                                   23586 1809 +     31101 I
e Hylobates_pileatus_a.tarseq_633                            3336052  0 -  11177569 C
e Hylobates_pileatus_b.LG02                                     189543157  0 - 191637585 C
e Hylobates_klossii.k141_240831                               2374  0 +     14092 C
e Hylobates_agilis.k141_232023                                2330  0 -     12752 C
e Heterohyrax_brucei.HetBruBak_scaffold_122365                3353  0 +      7595 C
e Heterocephalus_glaber.JH602082.1                        20664195 469 +  22651954 I
e Hapalemur_occidentalis.k141_907772                         14629 1801 -     16460 I
e Hapalemur_meridionalis.k141_248335                         14792 1795 -     41752 I
e Hapalemur_griseus.k141_1511508                             14691 1795 +     18253 I
e Hapalemur_gilberti.k141_488810                             13052 1795 -     15286 I
e Hapalemur_alaotrensis.k141_170648                           7899 1795 -     19426 I
e Eulemur_sanfordi.k141_1122526                              14844 1795 +    111500 I
e Eulemur_rufus.k141_1476633                                  5271 1795 -     17153 I
e Eulemur_rubriventer.k141_774594                             1219 1798 +     13026 I
e Eulemur_mongoz.k141_232305                                 11727 1796 +     97555 I
e Eulemur_macaco.k141_1562045                                13797 1788 +     75513 I
e Eulemur_fulvus.k141_544389                                 15035 1795 +     23973 I
e Eulemur_flavifrons.k141_1184614                            13800 1793 +     26330 I
e Eulemur_coronatus.k141_885031                              16604 1794 -     25546 I
e Eulemur_collaris.k141_377015                                7572 1796 -     16928 I
e Eulemur_albifrons.k141_576796                              41191 1795 -     44621 I
e Erinaceus_europaeus.JH835339.1                           3329444 1459 -   7059049 I
e Elephantulus_edwardii.JH947257.1                         1098746 2047 +  10337057 I
e Dipodomys_stephensi.DipSte_scaffold_75855                  12434 275 +     14536 I
e Dipodomys_ordii.KN672350.1                              18896216 278 +  37912305 I
e Dinomys_branickii.DinBra_scaffold_21862                    43755 17 +     67921 I
e Daubentonia_madagascariensis.ctg71                      12538339 3144 -  12879189 I
e Dasypus_novemcinctus.JH564415.1                            70652  1 +   2246927 I
e Cuniculus_paca.CunPac_flattened_line_231100                 3601 1095 +      5455 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    839213  0 +   1526836 C
e Craseonycteris_thonglongyai.CraTho_scaffold_49039           4200  0 +     23735 C
e Choloepus_hoffmanni.KN194906.1                            174412 1771 +    839153 I
e Chinchilla_lanigera.JH722012.1                           1260426 17 +   2543920 I
e Cheirogaleus_medius.k141_1055463                           17513 1794 +     57038 I
e Cheirogaleus_major.k141_333249                             22142 1800 -     52598 I
e Chaetophractus_vellerosus.ChaVel_scaffold_138870            7648  1 -      8501 I
e Camelus_ferus.KB017975.1                                  405530 47 -   1652518 I
e Camelus_dromedarius.KN272107.1                           2337232 47 -   7040546 I
e Camelus_bactrianus.KN276810.1                           10004760 47 -  17673402 I
e Avahi_peyrierasi.k141_1424874                              55394 1813 +     85213 I
e Avahi_laniger.k141_765380                                  54763 1810 -     92717 I

a score=0.000000
s hg38.chrUn_KI270753v1                                      11976 17 +     62944 TA--C--G-TG-ATAA----C-----TGT-----A-----T-----T
s Acinonyx_jubatus.LLWD01001279.1                           835340 14 -   1699592 TAAAA--G-TG-TT------T------CT-----A------------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_12655                     74784 19 +     87051 TT--TATC-AG-TGAA----C-------T-----A---TAT-----T
i Acomys_cahirinus.AcoCah_scaffold_12655                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9513295 16 -  29979442 TAAAA--G-TG-TA------T------AT-----A-----T-----T
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                             82199 16 -    347723 tgaaa--g-ta-tt------t------at-----a-----a-----t
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_9566                     76336 19 -     89534 CC--TATT-AG-tgaa----c-------c-----a-ca--t-----t
i Allactaga_bullata.AllBul_scaffold_9566                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   20220 17 -     52922 CA--G--G-TG-TTAA----T-----TAT-----A-----T-----T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_4309873                         20142 17 -     28001 TA--G--G-TG-TTAA----C-----TAT-----A-----T-----T
i Allochrocebus_lhoesti.k141_4309873                     C 0 C 0
s Allochrocebus_preussi.k141_1442296                         10635 17 -     18505 TA--G--G-TG-TTAA----C-----TAT-----A-----T-----T
i Allochrocebus_preussi.k141_1442296                     C 0 C 0
s Allochrocebus_solatus.k141_166128                          11507 17 -     12518 TA--G--G-TG-TTAA----C-----TAT-----A-----T-----T
i Allochrocebus_solatus.k141_166128                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             11827 17 +     51355 TA--T--G-TG-TTAG----C-----TGT-----A-----T-----T
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                                4938 17 -     36483 TA--G--G-TG-TTAG----C-----TGT-----A-----T-----T
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_566626                              15386 17 +     28687 TA--T--G-TG-TTAG----C-----TGT-----A-----T-----T
i Alouatta_discolor.k141_566626                          C 0 C 0
s Alouatta_juara.k141_1302312                                 3873 17 +     27940 TA--T--G-TG-TTAG----C-----TGT-----A-----T-----T
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_918386                            4947 17 -      9457 TA--T--G-TG-TTAG----C-----TGT-----A-----T-----T
i Alouatta_macconnelli.k141_918386                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                             3905 17 +     30492 TA--T--G-TG-TTAG----C-----TGT-----A-----T-----T
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                              8126 17 +     47717 TA--T--G-TG-TTAG----C-----TGT-----A-----T-----T
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_362188                              4639 17 +      5663 TA--T--G-TG-TTAG----C-----TGT-----A-----T-----T
i Alouatta_puruensis.k141_362188                         C 0 C 0
s Alouatta_seniculus.k141_117119                             19096 17 +     50774 TA--T--G-TG-TTAG----C-----TGT-----A-----T-----T
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          681013 13 -   2318259 TC--T--G-CG-T-------C------GT-----G-----T-----T
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 213
s Anoura_caudifer.AnoCau_scaffold_1412                      188237 13 +    412891 ---------TG-TT---AACT------AT-----A-----T-----T
i Anoura_caudifer.AnoCau_scaffold_1412                   I 2 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303              2280 13 -     32520 TA--T--G-TG-T-------T------GT-----G-----T-----T
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 I 187
s Aotus_azarae.k141_3104676                                  17692 17 -     33861 TA--T--G-TG-TTAA----C-----TAC-----A-----T-----T
i Aotus_azarae.k141_3104676                              C 0 C 0
s Aotus_griseimembra.k141_2240599                            17683 17 -     34016 TA--T--G-TG-TTAA----C-----TAC-----A-----T-----T
i Aotus_griseimembra.k141_2240599                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4300106 17 -   5030052 TA--T--G-TG-TTAA----C-----TAC-----A-----T-----T
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_2152450                             17721 17 -     34685 TA--T--G-TG-TTAA----C-----TAC-----A-----T-----T
i Aotus_trivirgatus.k141_2152450                         C 0 C 0
s Aotus_vociferans.k141_344750                               30842 17 -     47192 TA--T--G-TG-TTAA----C-----TAC-----A-----T-----T
i Aotus_vociferans.k141_344750                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_68852                      16006 19 +     20879 TA--AAAT-TC-TGAA----C-------T-----A---TAT-----T
i Aplodontia_rufa.AprRuf_scaffold_68852                  C 0 C 0
s Arctocebus_calabarensis.k141_1648548                         734 17 +      5281 TA--T--G-TG-TTAA----C-----AAT-----A-----G-----T
i Arctocebus_calabarensis.k141_1648548                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                  7646 13 +     43469 ---------TG-TT---AACT------AT-----A-----T-----T
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 2 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21212331 17 -  21539123 TA--T--G-TG-TTAA----C-----TGT-----A-----T-----T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_445860                               47118 17 -     48001 TA--T--G-TG-TTAA----C-----TGT-----A-----T-----T
i Ateles_belzebuth.k141_445860                           C 0 C 0
s Ateles_chamek.k141_1806455                                 29923 17 -     30947 TA--T--G-TG-TTAA----C-----TGT-----A-----T-----T
i Ateles_chamek.k141_1806455                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               11704 17 -     89868 TA--T--G-TG-TTAA----C-----TGT-----A-----T-----T
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              16092 17 -     40414 TA--T--G-TG-TTAA----C-----TGT-----A-----T-----T
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                23965 17 +     72325 TA--T--G-TG-TTAA----C-----TGT-----A-----T-----T
i Ateles_paniscus.k141_457735                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15195352 13 +  23207421 TA--C--A-TG-T-------T------AT-----a-----t-----t
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF707048.1                         5817 13 -     18090 TA--C--G-TG-T-------T------AT-----a-----t-----t
i Balaenoptera_bonaerensis.DF707048.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_50177                    32093 13 +     34529 TA--T--G-TG-T-------T------GT-----G-----T-----T
i Beatragus_hunteri.BeaHun_scaffold_50177                C 0 I 213
s Bison_bison.KN261452.1                                    204728 13 -    288883 TG--T--G-TG-T-------T------GT-----G-----T-----T
i Bison_bison.KN261452.1                                 C 0 I 848
s Bos_indicus.CM003047.1                                  20277965 13 +  48749331 TG--T--G-TG-T-------T------GT-----G-----T-----T
i Bos_indicus.CM003047.1                                 C 0 I 212
s Bos_mutus.JH880303.1                                     1130519 13 -   1948126 TG--T--G-TG-T-------T------GT-----G-----T-----T
i Bos_mutus.JH880303.1                                   C 0 I 212
s Bos_taurus.CM000203.6                                   18088603 13 +  45695690 TG--T--G-TG-T-------T------GT-----G-----T-----T
i Bos_taurus.CM000203.6                                  C 0 I 212
s Bubalus_bubalis.KI419123.1                               2824553 13 +   4408762 TG--T--G-TG-T-------T------GT-----G-----T-----T
i Bubalus_bubalis.KI419123.1                             C 0 I 213
s Cacajao_ayresi.k141_552049                                104981 17 -    122966 TA--T--G-TG-TTGG----C-----TAT-----A-----T-----T
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   64474 17 +     81800 TA--T--G-TG-TTGA----C-----TAT-----A-----T-----T
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  33666 17 -     95584 TA--T--G-TG-TTGG----C-----TAT-----A-----T-----T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         57762 17 -    119600 TA--T--G-TG-TTGG----C-----TAT-----A-----T-----T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_10318                               1387 17 +     27907 TA--T--G-TG-TTAA----C-----TAC-----A-----T-----T
i Callibella_humilis.k141_10318                          C 0 C 0
s Callimico_goeldii.k141_737284                               1033 17 -     31217 TA--T--G-TG-TTAA----C-----TGC-----A-----T-----T
i Callimico_goeldii.k141_737284                          C 0 C 0
s Callithrix_geoffroyi.k119_69176                             1329 17 +      5377 TA--T--G-TG-TAAA----C-----TAC-----A-----T-----T
i Callithrix_geoffroyi.k119_69176                        C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                       23593180 17 - 189096842 TA--T--G-TG-TTAA----C-----TAC-----A-----T-----T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_1168854                              2006 17 -     12329 TA--T--G-TG-TTAA----C-----TAC-----A-----T-----T
i Callithrix_kuhlii.k119_1168854                         C 0 C 0
s CanFam4.chr16                                           17802965 16 -  60362399 taaaa--g-tg-tt------t------at-----a-----t-----t
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                     3711 16 -     43241 taaaa--g-tg-tt------t------at-----a-----t-----t
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9038406 16 -   9314153 taaaa--g-tg-tt------t------aT-----A-----T-----T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17962882 16 -  59632846 taaaa--g-tg-tt------t------aT-----A-----T-----T
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18504179 16 +  63665305 taaaa--g-tg-tt------t------aT-----A-----T-----T
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18835038 13 +  46296322 TC--T--G-CG-T-------C------GT-----G-----T-----T
i Capra_aegagrus.CM003241.1                              C 0 I 213
s Capra_hircus.CM004588.1                                 18065839 13 -  44709034 TC--T--G-CG-T-------C------GT-----G-----T-----T
i Capra_hircus.CM004588.1                                C 0 I 213
s Capromys_pilorides.CapPil_scaffold_65020                    3723  3 -     12242 TG--T------------------------------------------
i Capromys_pilorides.CapPil_scaffold_65020               C 0 I 8
s Carlito_syrichta.NW_007259797.1                           158950 17 -    496798 TA--T--G-tg-tcat----c-----tat-----t-----t-----t
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_92756                7989 13 -     11696 ---------GG-TT---AACT------GT-----A-----T-----T
i Carollia_perspicillata.CarPer_scaffold_92756           I 2 C 0
s Castor_canadensis.CasCan_scaffold_2074                    140424 19 +    179628 TA--CAAC-TG-TTAA----C-------C-----A-----T--A-CC
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     97485 17 +    217609 TC--T--G-TG-T-------T-AACT-GT-----A-----T-----T
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18352304  6 -  23392119 --------------------CTAAC---T------------------
i Cavia_aperea.AVPZ01000300.1                            I 5 I 7
s Cavia_porcellus.DS562891.1                              18364564  6 -  23407841 --------------------CTAAC---T------------------
i Cavia_porcellus.DS562891.1                             I 5 I 7
s Cavia_tschudii.CavTsc_scaffold_8919                       103446  6 +    143979 --------------------CTAAC---T------------------
i Cavia_tschudii.CavTsc_scaffold_8919                    I 5 I 7
s Cebuella_pygmaea.k141_793006                                1028 17 -     15088 TA--T--G-TA-TTAA----C-----TAT-----A-----T-----T
i Cebuella_pygmaea.k141_793006                           C 0 C 0
s Cebus_albifrons.Contig27                                25654508 17 +  26074798 TA--T--G-TG-TTAA----C-----CAC-----A-----T-----T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                                2452 17 +     28840 TA--T--G-TG-TTAA----C-----CAC-----A-----T-----T
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_1837183                                 2173 17 +     14051 TA--T--G-TG-TTAA----C-----CAC-----A-----T-----T
i Cebus_unicolor.k141_1837183                            C 0 C 0
s Cephalopachus_bancanus.k141_1423433                         8754 17 +     31688 TA--T--G-TG-CCAT----C-----TAT-----T-----T-----T
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12235030 19 +  27778364 tataa--g-tg-tt---AACt------at-----a-----t-----t
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_57634           6053 19 -     25243 tataa--g-tg-tt---AACT------AT-----A-----T-----T
i Ceratotherium_simum_cottoni.CerCot_scaffold_57634      C 0 C 0
s Cercocebus_atys.KQ010504.1                               4481155 17 +   4669795 TA--T--G-TG-TTAA----C-----TAT-----A-----T-----T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1540778                        5668 17 +     17872 TA--T--G-TG-TTAA----C-----TAT-----A-----T-----T
i Cercocebus_chrysogaster.k141_1540778                   C 0 C 0
s Cercocebus_lunulatus.k141_3342297                           6256 17 -     14043 TA--T--G-TG-TTAA----C-----TAT-----A-----T-----T
i Cercocebus_lunulatus.k141_3342297                      C 0 C 0
s Cercocebus_torquatus.k141_3057011                          14349 17 +     27781 TA--T--G-TG-TTAA----C-----TAT-----A-----T-----T
i Cercocebus_torquatus.k141_3057011                      C 0 C 0
s Cercopithecus_ascanius.k141_1024104                        14504 17 -     20310 TA--G--G-TG-TTAA----C-----TAT-----A-----T-----T
i Cercopithecus_ascanius.k141_1024104                    C 0 C 0
s Cercopithecus_cephus.k141_1078548                          17481 17 +     29689 TA--G--G-TG-TTAA----C-----TAT-----A-----T-----T
i Cercopithecus_cephus.k141_1078548                      C 0 C 0
s Cercopithecus_diana.k141_1150327                           12242 17 -     20078 TA--G--G-TG-TTAA----C-----TAT-----A-----T-----T
i Cercopithecus_diana.k141_1150327                       C 0 C 0
s Cercopithecus_hamlyni.k141_187466                          20154 17 -     27936 TA--G--G-TG-TTCA----C-----TAT-----A-----T-----T
i Cercopithecus_hamlyni.k141_187466                      C 0 C 0
s Cercopithecus_lowei.k141_1854285                            9033 17 -     17152 TA--G--G-TG-TTAA----C-----TAT-----A-----T-----T
i Cercopithecus_lowei.k141_1854285                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38828756 17 +  39242232 TA--G--G-TG-TTAA----C-----TAT-----A-----T-----T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21228271 17 -  21565898 TA--G--G-TG-TTAA----C-----TAT-----A-----T-----T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_2526306                       45375 17 -     53127 TA--G--G-TG-TTAA----C-----TAT-----A-----T-----T
i Cercopithecus_neglectus.k141_2526306                   C 0 C 0
s Cercopithecus_nictitans.k141_1119862                        5630 17 +     13442 TA--G--G-TG-TTAA----C-----TAT-----A-----T-----T
i Cercopithecus_nictitans.k141_1119862                   C 0 C 0
s Cercopithecus_petaurista.k141_807961                       20176 17 -     27947 TA--G--G-TG-TTAA----C-----TAT-----A-----T-----T
i Cercopithecus_petaurista.k141_807961                   C 0 C 0
s Cercopithecus_pogonias.k141_2303387                         3202 17 +     10558 TA--G--G-TG-TTAA----C-----TAT-----A-----T-----T
i Cercopithecus_pogonias.k141_2303387                    C 0 C 0
s Cercopithecus_roloway.k141_2581234                          6217 17 +     14005 TA--G--G-TG-TTAA----C-----TAT-----A-----T-----T
i Cercopithecus_roloway.k141_2581234                     C 0 C 0
s Chiropotes_albinasus.k141_2206961                           3113 13 -     15524 ---------TG-TTAA----C-----TAC-----A-----T-----T
i Chiropotes_albinasus.k141_2206961                      C 0 C 0
s Chiropotes_israelita.k141_747660                          102091 17 +    146308 TA--T--G-TG-CTGA----C-----TAT-----A-----T-----T
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          33910 17 -     50570 TA--T--G-TG-CTGA----C-----TAT-----A-----T-----T
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18434082 17 -  18827391 TA--G--A-TG-TTAA----C-----TAT-----A-----T-----T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       20577 17 -     50209 TA--G--A-TG-TTAA----C-----TAT-----A-----T-----T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135427583 17 + 135778131 TA--G--A-TG-TTAA----C-----TAT-----A-----T-----T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                            1916118 17 +   2368649 TA--T--G-TG-TTAA----C-----TAT-----A-----T-----C
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199954359 17 + 200372422 TA--T--G-TG-TTAA----C-----TAT-----A-----T-----C
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              42668 17 +     84244 TA--T--G-TG-TTAA----C-----TAT-----A-----T-----C
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17552989  9 -  53390261 ca--t--g-tg-tt------a--------------------------
i Condylura_cristata.JH655891.1                          C 0 I 8
s Craseonycteris_thonglongyai.CraTho_scaffold_49039           4200 18 +     23735 CA--AA-G-TG-TT---AACC------AT-----A-----T-----T
i Craseonycteris_thonglongyai.CraTho_scaffold_49039      C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_18520                 54262 19 +     63868 TG--TACC-AG-TGAA----C-------T-----A---TAT-----T
i Cricetomys_gambianus.CriGam_scaffold_18520             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11669785 19 + 224834208 CA--TACC-AG-TGAA----C-------T-----A---CAT-----T
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_37019               7054  8 -     19598 ----------------------------------A-----TCTAAAT
i Crocidura_indochinensis.CroInd_scaffold_37019          I 9 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             31892 13 -     87169 taaaa--g-tg-gg------t------ct------------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 3
s Ctenomys_sociabilis.CteSoc_scaffold_29687                  38648  2 +     51376 --------------------C-------T------------------
i Ctenomys_sociabilis.CteSoc_scaffold_29687              I 5 I 4
s Dasyprocta_punctata.DasPun_flattened_line_15900             3277  6 -     75252 --------------------CTAAC---T------------------
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 5 I 7
s Delphinapterus_leucas.KZ290073.1                        16815227 13 +  35494412 TA--T--G-TG-T-------T------AT-----a-----t-----t
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8632994 13 +  20541912 ---------TG-TT---AACT------AT-----A-----T-----T
i Desmodus_rotundus.KZ672289.1                           I 2 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  676872 19 +   1390856 tataa--g-tg-tt---aact------at-----g-----t-----t
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                    9632 19 +    198055 tataa--g-tg-tt---AACT------AT-----A-----T-----T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_30833                 35998  6 -     42551 --------------------CTAAC---T------------------
i Dolichotis_patagonum.DolPat_scaffold_30833             I 5 I 7
s Eidolon_helvum.KE797349.1                                   1114 18 -     31197 ca--t-ag-tG-TT---AACT------AT-----A-----T-----t
i Eidolon_helvum.KE797349.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       315490  7 +    607251 ------------T-------T------GT-----G-----T-----T
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 205
s Ellobius_lutescens.LOEQ01008920.1                          25145 19 -    110024 TA--TACT-AG-TGAa----c-------t-----at-a--t-----t
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01081419.1                            5075 19 +      8657 TA--TACC-AG-TGAA----c-------t-----a-ca--t-----t
i Ellobius_talpinus.LOJH01081419.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16339412 16 -  41312741 taaaa--g-tg-tt------t------at-----a-----a-----t
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                              2151503 17 -  14770903 TA--A--G-TG-TT---ACCt------at-----a-----t-----t
i Eptesicus_fuscus.JH977646.1                            I 2 C 0
s Equus_asinus.JREZ01000139.1                              1287166 19 +   4378816 tataa--g-tg-at---aatt------at-----a-----t-----t
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18534974 19 -  39960074 tataa--g-tg-at---aatt------at-----a-----t-----t
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               37003 19 +    498745 tataa--g-tg-at---aatt------at-----a-----t-----t
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21210752 17 -  21539334 TA--G--G-TG-TTAA----C-----TAT-----A-----T-----T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           14650 13 +    133382 ta--t--g-tg-t-------t------at-----a-----t-----t
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_31514             28596 13 -     44125 ta--t--g-tg-t-------t------at-----a-----t-----t
i Eubalaena_japonica.EubJap_flattened_line_31514         C 0 C 0
s Felis_catus.CM001381.2                                  20240472 16 + 206538554 taaaa--g-tg-tT------T------CT-----A-----T-----T
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20199343 16 + 205367284 TAAAA--G-TG-TT------T------CT-----A-----T-----T
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_20823                 13004 16 -     36744 TAAAA--G-TG-TT------T------CT-----A-----T-----T
i Felis_nigripes.FelNig_flattened_line_20823             C 0 C 0
s Fukomys_damarensis.KN121974.1                             853087  9 +   3816255 --------------------C-------T-ATTAA-----C-----A
i Fukomys_damarensis.KN121974.1                          I 5 C 0
s Galago_moholi.ctg2040                                     429933 17 -    453645 TA--T--A-TG-TTAA----C-----AAT-----A-----G-----T
i Galago_moholi.ctg2040                                  C 0 C 0
s Galago_senegalensis.k141_631886                             7627 17 +     11339 TA--T--A-TG-TTAA----C-----AAT-----A-----G-----T
i Galago_senegalensis.k141_631886                        C 0 C 0
s Galagoides_demidoff.k141_1711393                            4882 17 +     41679 TA--T--G-TG-TTAA----C-----AAT-----A-----G-----T
i Galagoides_demidoff.k141_1711393                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_108840               6227 17 -      9135 TA--T--G-TG-TTAA----C-----TAC-----A-----T-----T
i Galeopterus_variegatus.GalVar_scaffold_108840          C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     612733 13 -    660261 TA--T--G-TG-T-------T------GT-----G-----T-----T
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 I 206
s Glis_glis.GliGli_scaffold_19807                            35829 17 +     49224 ta--taat-tg-ttaa----c-------t-----a-----t-----t
i Glis_glis.GliGli_scaffold_19807                        C 0 C 0
s Gorilla_beringei.k141_3596273                              21188 17 -     32273 TA--T--G-TG-ATAA----C-----TGT-----A-----T-----T
i Gorilla_beringei.k141_3596273                          C 0 C 0
s Gorilla_gorilla.LT578341.1                             186343304 17 + 186649187 TA--C--G-TG-ATAA----C-----Tgt-----a-----t-----t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   37452 17 +     78134 ta--taac-tt-ttaa----c-------t-----a-----t-----t
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               245707 13 +    327341 taaaa--g-t---g------t------CT-----A-----T------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_45859                 23332 13 +     36099 TC--T--G-CG-G-------T------GT-----G-----T-----T
i Hemitragus_hylocrius.HemHyl_scaffold_45859             C 0 I 214
s Hippopotamus_amphibius.HipAmp_scaffold_9076               114072 17 +    128679 AT--T--G-TG-T---CAATT------AT-----A-----T-----T
i Hippopotamus_amphibius.HipAmp_scaffold_9076            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       113906 19 +   1711038 CA--TACG-TG-TT---AACT------AT-----A-----T-----T
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_101188               2458 19 +      9903 cA--TACG-TG-TT---AACT------AT-----A-----T-----T
i Hipposideros_galeritus.HipGal_scaffold_101188          C 0 C 0
s Hoolock_leuconedys.ctg274                                    440438 17 +    630532 TA--C--G-TG-TTAA----C-----TAT-----A-----T-----T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_26932                  48654 16 +     55795 CAAAA--G-TG-TG------T------CT-----A-----T-----T
i Hyaena_hyaena.HyaHya_flattened_line_26932              C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      85748  6 +    135385 ---------------a----c-------c-----a-----T-----A
i Hystrix_cristata.HysCri_scaffold_5660                  I 194 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            27390  3 -    143317 tg--t------------------------------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 11
s Ictidomys_tridecemlineatus.JH393364.1                    7525594 19 -   7955117 TA--TCAc-tg-ttaa----t-------t-----at-a--t-----t
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779                2434 13 -     31341 TA--T--G-CG-T-------T------AT-----A-----T-----T
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8279069 19 -   9596543 CC--TATC-AG-TGAA----A-------C-----A---CAT-----T
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_81059                 2173 13 -     18011 TA--T--G-TG-T-------T------AT-----A-----T-----T
i Kogia_breviceps.KogBre_flattened_line_81059            C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         18151 17 -     38430 TA--T--G-TG-TTAA----C-----TGT-----A-----T-----T
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_32767                    20922 17 -     42476 TA--A--G-TG-TT---ACCT------AG-----A-----T-----T
i Lasiurus_borealis.LasBor_scaffold_32767                I 14 C 0
s Leontocebus_fuscicollis.k141_1820339                       10179 14 +     64341 -------G-TG-TTAA----C-----TAC-----A-----T-----T
i Leontocebus_fuscicollis.k141_1820339                   C 0 C 0
s Leontocebus_illigeri.k141_1304848                           2520 14 -     35062 -------G-TG-TTAA----C-----TAC-----A-----T-----T
i Leontocebus_illigeri.k141_1304848                      C 0 C 0
s Leontocebus_nigricollis.k141_4610752                       10366 14 +     35603 -------G-TG-TTAA----C-----TAC-----A-----T-----T
i Leontocebus_nigricollis.k141_4610752                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1519602                    31428 17 +     38576 TA--T--G-TG-TTAA----C-----TAC-----A-----A-----T
i Leontopithecus_chrysomelas.k141_1519602                C 0 C 0
s Leontopithecus_rosalia.k141_464620                         28132 17 +     66356 TA--T--G-TG-TTAA----C-----TAC-----A-----A-----T
i Leontopithecus_rosalia.k141_464620                     C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3059349 16 +   3914936 taaaa--g-tg-tt------t------aT-----A-----T-----T
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             271705 13 -    662738 ta--t--a-tg-t-------t------at-----a-----t-----t
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1442710 17 +   1826925 TA--T--G-TG-TTAA----C-----TAT-----A-----T-----T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_399337                            17936 17 -     33856 TA--T--G-CG-TTAA----C-----AAT-----A-----G-----T
i Loris_lydekkerianus.k141_399337                        C 0 C 0
s Loris_tardigradus.ctg83                                  1015647 17 +   6120653 TA--T--G-CG-TTAA----C-----AAT-----A-----G-----T
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17959122 16 -  59628241 taaaa--g-tg-tt------t------at-----a-----t-----c
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                              12517 17 +     40492 TA--T--G-TG-TTAA----C-----TAT-----A-----T-----T
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59681764 17 +  60120075 TA--T--G-TG-TTAA----C-----TAT-----A-----T-----T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_18836                                 18315 17 -     26193 TA--T--G-TG-TTAA----C-----TAT-----A-----T-----T
i Macaca_cyclopis.k119_18836                             C 0 C 0
s Macaca_fascicularis.k141_814140                            86090 17 -    114318 TA--G--G-TG-TTAA----C-----TAT-----A-----T-----T
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_255327                                 11779 17 -     23192 TA--T--G-TG-TTAA----C-----TAT-----A-----T-----T
i Macaca_fuscata.k119_255327                             C 0 C 0
s Macaca_leonina.k141_3550399                                21244 17 -     29190 TA--T--G-TG-TTAA----C-----TAT-----A-----T-----T
i Macaca_leonina.k141_3550399                            C 0 C 0
s Macaca_maura.k141_2733130                                  29829 17 +     37952 TA--T--G-TG-TTAA----C-----TAT-----A-----T-----T
i Macaca_maura.k141_2733130                              C 0 C 0
s Macaca_mulatta.NC_041758.1                             186844896 17 + 187317192 TA--T--G-TG-TTAA----C-----TAT-----A-----T-----T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25463477 17 -  25927173 TA--T--G-TG-TTAA----C-----TAT-----A-----T-----T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_1655396                                  85681 17 +     89720 TA--T--G-TG-TTAA----C-----TAT-----A-----T-----T
i Macaca_nigra.k141_1655396                              C 0 C 0
s Macaca_radiata.k141_3680011                                12693 17 +     20474 TA--T--G-TG-TTAA----C-----TAT-----A-----T-----T
i Macaca_radiata.k141_3680011                            C 0 C 0
s Macaca_siberu.k141_635500                                  12467 17 -     14993 TA--T--G-TG-TTAA----C-----TAT-----A-----T-----T
i Macaca_siberu.k141_635500                              C 0 C 0
s Macaca_silenus.Contig273                                  335330 17 -    668171 TA--T--G-TG-TTAA----C-----TAT-----A-----T-----T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_256239                                10754 17 -     24072 TA--T--G-TG-TTAA----C-----TAT-----A-----T-----T
i Macaca_thibetana.k99_256239                            C 0 C 0
s Macaca_tonkeana.k141_1498238                               31400 17 -     45290 TA--T--G-TG-TTAA----C-----TAT-----A-----T-----T
i Macaca_tonkeana.k141_1498238                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                  6151 18 +    270270 ca--t-ag-tG-TT---AACT------AT-----A-----T-----T
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23942985 17 -  24302211 TA--T--G-TG-TTAA----C-----TAT-----A-----T-----T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               357087 17 +    752769 TA--T--G-TG-TTAA----C-----TAT-----A-----T-----T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33106673 19 -  40650429 TA--TCGC-tg-ttaa----t-------t-----at-a--t-----t
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        16770 17 -    207569 -------G-TG-TG---AACT-A-CT-AC-----A-----T-----T
i Megaderma_lyra.MegLyr_scaffold_4542                    I 3 C 0
s Mellivora_capensis.MelCap_flattened_line_69365             12994 16 +     13704 taaaa--g-tg-tT------T------AT-----A-----T-----T
i Mellivora_capensis.MelCap_flattened_line_69365         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 37728 19 +    140813 TA--TACC-AG-TGAA----C-------T-----A---TAT-----T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_108144                    6863 13 +     10310 TA--T--G-TG-T-------T------AT-----A-----T-----T
i Mesoplodon_bidens.MesBid_scaffold_108144               C 0 C 0
s Mico_argentatus.k141_1024458                                1035 17 -     20047 TA--T--G-TG-TTAA----C-----TAC-----A-----T-----T
i Mico_argentatus.k141_1024458                           C 0 C 0
s Mico_humeralifer.k141_700707                                  72 17 +      5224 TA--T--G-TG-TTAA----C-----TAC-----A-----T-----T
i Mico_humeralifer.k141_700707                           C 0 C 0
s Mico_schneideri.k141_916733                                       1035 17 +      5107 TA--T--G-TG-TTAA----C-----TAC-----A-----T-----T
i Mico_schneideri.k141_916733                                  C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_52381                18952 13 -     19307 ---------TG-TT---AACT------AT-----A-----C-----T
i Micronycteris_hirsuta.MicHir_scaffold_52381            I 2 C 0
s Miniopterus_natalensis.LDJU01000034.1                    1854029 17 +   8254450 TA--A--T-TC-TT---AACT------gt-----g-----t-----t
i Miniopterus_natalensis.LDJU01000034.1                  I 2 C 0
s Miniopterus_schreibersii.MinSch_scaffold_18080             37707 17 +     64694 TA--A--T-TC-TT---AACT------GT-----G-----T-----T
i Miniopterus_schreibersii.MinSch_scaffold_18080         I 2 C 0
s Miopithecus_ogouensis.k141_534055                          14655 17 -     28506 TA--G--G-TG-TTAA----C-----TAT-----A-----T-----T
i Miopithecus_ogouensis.k141_534055                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_55178          518 16 +     26817 taaaa--g-tg-tT------T------AT-----A-----T-----T
i Mirounga_angustirostris.MirAng_flattened_line_55178    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    30611 13 -    437263 TA--T--G-CG-T-------T------AT-----A-----T-----T
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 144621 13 -    366855 ---------TG-TT---AACT------AT-----A-----T-----T
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 2 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                   4919 13 +     82753 TA--T--G-TG-T-------T------GT-----G-----T-----T
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 178
s Mungos_mungo.MunMun_flattened_line_40893                     710 15 +      5729 TAAAA--G-TG-TG------T------CT-----A-----T------
i Mungos_mungo.MunMun_flattened_line_40893               C 0 I 5
s Murina_feae.MurFea_scaffold_85699                          11286 17 +     14753 TA--A--G-TG-TT---ACCT------AT-----A-----T-----T
i Murina_feae.MurFea_scaffold_85699                      I 2 C 0
s Mus_caroli.LT608237.1                                   84365310 19 - 120012414 TG--TACC-AC-TAAA----c-------t-----gt-a--t-----t
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       87654714 19 - 129401213 TG--TACC-AC-TGAA----c-------t-----gt-a--t-----t
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   31359623 18 -  89631738 CT--TAAG--A-TGAa----c-------t-----at-a--t-----c
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  90757501 19 - 130317789 TG--TACC-AC-TGAA----c-------t-----gt-a--t-----t
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_82313              9298 17 +     14296 TA--TAAC-TA-TAAA----C-------T-----A-----T-----T
i Muscardinus_avellanarius.MusAve_scaffold_82313         I 1 C 0
s Mustela_putorius.JH418006.1                               304492 16 -  14710649 TAAag--g-tg-tt------t------at-----a-----a-----t
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_10123                     73900  3 -     80779 TA--T------------------------------------------
i Myocastor_coypus.MyoCoy_scaffold_10123                 C 0 I 8
s Myotis_brandtii.KE162005.1                                284771 17 -  10118263 TA--A--G-TG-TT---ACct------at-----a-----t-----t
i Myotis_brandtii.KE162005.1                             I 2 C 0
s Myotis_davidii.KB100139.1                                1592089 17 -   6019432 TA--A--G-TG-TT---ACCT------AT-----a-----t-----t
i Myotis_davidii.KB100139.1                              I 2 C 0
s Myotis_lucifugus.GL429869.1                              3908189 17 -   4330536 TA--C--G-TG-TT---ACct------at-----a-----t-----t
i Myotis_lucifugus.GL429869.1                            I 2 C 0
s Myotis_myotis.MyoMyo_scaffold_44643                         2741 17 +     25416 TA--A--G-TG-TT---ACCT------AT-----A-----T-----T
i Myotis_myotis.MyoMyo_scaffold_44643                    I 2 C 0
s Nannospalax_galili.KL204047.1                            2040261 19 -   3037898 TA--CCCC-ag-taaa----c-------t-----gtt---t-----t
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_413338                               20727 17 +     21681 TA--T--G-TG-TTAA----C-----TAT-----A-----T-----T
i Nasalis_larvatus.k141_413338                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20310289 16 +  31847680 caaaa--g-tg-tt------t------aT-----A-----T-----T
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5869576 13 +   7148211 TA--T--G-CG-T-------T------AT-----a-----t-----t
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_251                    760844 13 +    783361 ---------TG-TT---AACT------GT-----A-----T-----T
i Noctilio_leporinus.NocLep_scaffold_251                 I 2 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9153038 16 -   9404916 taaaa--g-tg-tt------t------aT-----A-----T-----T
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102596151 17 - 196305487 TA--T--G-TG-TTAA----C-----AAT-----A-----G-----T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1514628                             1618 17 -      5837 TA--T--G-TG-TTAA----C-----AAT-----A-----G-----T
i Nycticebus_coucang.k141_1514628                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105772073 17 + 199412804 TA--T--G-TG-TTAA----C-----AAT-----A-----G-----T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             1368314 12 +   3988456 -------t-ta-tttc----c-------t-----a-----t-----t
i Ochotona_princeps.JH802162.1                           I 4 I 2
s Odobenus_rosmarus.KB229312.1                              509114 16 -   2017862 taaaa--g-tg-tt------t------aT-----A-----T-----T
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         148295 13 +    630418 CA--T--G-TG-T-------T------GT-----G-----T-----T
i Odocoileus_virginianus.KZ100018.1                      C 0 I 205
s Okapia_johnstoni.LVCL01S0005463.1                          82679 13 -    150152 TA--T--G-TG-T-------T------GC-----G-----T-----T
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 205
s Onychomys_torridus.OnyTor_scaffold_2986                    84598 19 +    102263 TG--CACC-AG-TGAA----C-------T-----A---CAT-----T
i Onychomys_torridus.OnyTor_scaffold_2986                C 0 C 0
s Orcinus_orca.KB316932.1                                  2785467 13 -  10937097 TA--T--G-CG-T-------T------AT-----a-----t-----t
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       466463 16 -    559221 taaaa--g-tg-tt------t------aT-----A-----T-----T
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k1